3248 215 20 3 chr20 0 735 -66667270 + L1PA15-16 LINE L1 1867 2614 -4235 992 147 0 0 chr20 735 878 -66667127 + AluJo SINE Alu 1 143 -169 835 105 8 8 chr20 912 1045 -66666960 + L1PA15 LINE L1 6033 6165 0 502 273 17 17 chr20 1045 1221 -66666784 - L1MEc LINE L1 -4676 1720 1545 227 301 2 9 chr20 1673 1782 -66666223 + MIR3 SINE MIR 78 167 -41 247 158 35 53 chr20 1834 1891 -66666114 + MIR3 SINE MIR 108 163 -45 246 315 18 36 chr20 1927 2038 -66665967 + MER117 DNA MER1_type 74 182 -15 2322 84 3 3 chr20 2280 2578 -66665427 - AluSq SINE Alu -15 298 1 23 0 0 0 chr20 2590 2613 -66665392 + AT_rich Low_complexity Low_complexity 1 23 0 6979 127 14 6 chr20 3397 5026 -66662979 - L1MA2 LINE L1 0 6304 4664 3107 123 43 2 chr20 5028 5514 -66662491 + MER75 DNA T2_type 1 506 -8 206 62 31 0 chr20 5705 5737 -66662268 + (TC)n Simple_repeat Simple_repeat 1 33 0 261 0 0 0 chr20 7563 7592 -66660413 + (CA)n Simple_repeat Simple_repeat 2 30 0 341 308 47 86 chr20 7592 7826 -66660179 - L1ME LINE L1 -540 5581 5357 225 240 90 20 chr20 8164 8264 -66659741 - L1ME LINE L1 -251 5870 5764 35 24 0 0 chr20 8420 8462 -66659543 + AT_rich Low_complexity Low_complexity 1 42 0 234 341 12 12 chr20 8753 8838 -66659167 + L3 LINE CR1 1455 1539 -38 1654 283 61 6 chr20 9000 9711 -66658294 + L2 LINE L2 2417 3172 -141 1911 189 0 22 chr20 9761 10163 -66657842 - L1 LINE L1 -754 5392 5000 438 220 78 14 chr20 10188 10329 -66657676 + L2 LINE L2 3162 3311 -2 222 163 23 0 chr20 10753 10796 -66657209 + (TA)n Simple_repeat Simple_repeat 2 45 0 239 300 12 0 chr20 10834 10914 -66657091 + L2 LINE L2 2892 2972 -342 615 304 140 53 chr20 10967 11090 -66656915 + L2 LINE L2 1177 1288 -2026 2099 131 0 0 chr20 11090 11388 -66656617 - AluSc SINE Alu -11 298 1 615 304 140 53 chr20 11388 11659 -66656346 + L2 LINE L2 1288 1534 -1780 2304 98 10 3 chr20 11659 11964 -66656041 - AluSq SINE Alu -4 309 3 615 304 140 53 chr20 11964 12341 -66655664 + L2 LINE L2 1534 2016 -1298 2626 124 26 35 chr20 12820 13048 -66654957 - L1MA5 LINE L1 0 6300 6077 2050 151 15 18 chr20 13048 13386 -66654619 - MER1B DNA MER1_type 0 337 1 2626 124 26 35 chr20 13386 13616 -66654389 - L1MA5 LINE L1 -223 6077 5846 249 305 60 46 chr20 13719 13870 -66654135 + LTR16C LTR ERVL 323 475 -16 209 291 123 50 chr20 13894 14073 -66653932 + L2 LINE L2 2033 2224 -1090 2157 137 12 9 chr20 14074 14417 -66653588 - L1P LINE L1 -2289 3857 3514 214 255 0 0 chr20 14461 14508 -66653497 + CT-rich Low_complexity Low_complexity 1 47 0 2374 88 3 0 chr20 16022 16317 -66651688 - AluY SINE Alu -15 296 1 6667 73 24 0 chr20 16322 17573 -66650432 - L1PA8 LINE L1 -11 6161 4897 4410 106 12 5 chr20 17573 18236 -66649769 + L1P LINE L1 2119 2786 -3360 523 250 9 0 chr20 18434 18546 -66649459 + MER81 DNA DNA 1 113 -1 225 333 0 0 chr20 18855 18927 -66649078 + L2 LINE L2 3187 3258 -14 611 254 182 0 chr20 18985 19260 -66648745 + Charlie2 DNA MER1_type 1 325 -2457 415 265 19 52 chr20 19261 19472 -66648533 + Charlie2 DNA MER1_type 1855 2058 -804 * 948 264 74 7 chr20 19466 19872 -66648133 + Charlie2 DNA MER1_type 2380 2812 -50 2495 58 3 0 chr20 19971 20281 -66647724 - AluY SINE Alu 0 311 1 183 156 0 0 chr20 20627 20659 -66647346 + (TA)n Simple_repeat Simple_repeat 1 32 0 1579 123 67 15 chr20 20677 20946 -66647059 - L1PB4 LINE L1 -9 6147 5865 477 0 0 0 chr20 21307 21360 -66646645 + (TG)n Simple_repeat Simple_repeat 2 54 0 1524 203 81 13 chr20 21463 21848 -66646157 - L1M4 LINE L1 -899 5247 4837 1215 322 40 14 chr20 21857 22351 -66645654 + L1PA16 LINE L1 868 1374 -6200 12724 210 26 44 chr20 22817 28331 -66639674 + L1PA16 LINE L1 2182 7603 -1 2262 220 94 57 chr20 28398 28975 -66639030 - MER77 LTR ERV1 -7 598 1 5205 178 59 25 chr20 30591 31699 -66636306 - L1PA16 LINE L1 -6 6160 4954 2325 110 0 0 chr20 31699 32007 -66635998 - AluSg SINE Alu -2 308 1 5205 178 59 25 chr20 32007 32873 -66635132 - L1PA16 LINE L1 -1212 4954 4118 338 155 84 0 chr20 32878 32949 -66635056 - L1 LINE L1 -1888 4258 4182 1749 244 28 25 chr20 32984 33586 -66634419 - L1M4 LINE L1 -904 5242 4639 884 323 68 17 chr20 33619 34028 -66633977 + L1PBb LINE L1 8 437 -6412 363 364 67 18 chr20 34398 34563 -66633442 + L1PBb LINE L1 694 866 -5983 379 278 83 101 chr20 34601 34878 -66633127 + L1PBb LINE L1 796 1067 -5782 8181 157 95 10 chr20 35085 36776 -66631229 + L1PBb LINE L1 1040 2957 -3891 21 0 0 0 chr20 37622 37643 -66630362 + AT_rich Low_complexity Low_complexity 1 21 0 330 276 88 54 chr20 37724 37963 -66630042 - L1MDa LINE L1 -3987 2553 2307 276 256 116 39 chr20 38136 38343 -66629662 - L1MDa LINE L1 -3736 2804 2582 300 284 123 31 chr20 38544 38836 -66629169 - L1MDa LINE L1 -4640 2081 1763 354 273 169 8 chr20 38937 39186 -66628819 - HAL1 LINE L1 -1220 1287 999 304 297 187 29 chr20 39370 39616 -66628389 + HAL1 LINE L1 1613 1897 -610 248 273 140 47 chr20 40710 40860 -66627145 + MLT1J LTR MaLR 238 401 -110 336 266 35 18 chr20 41275 41388 -66626617 + L2 LINE L2 3199 3313 0 195 229 0 0 chr20 41644 41679 -66626326 - L3 LINE CR1 -93 1484 1450 725 276 126 37 chr20 41856 42709 -66625296 + L1MCc LINE L1 1129 2254 -4868 372 259 37 9 chr20 42724 42832 -66625173 + L1M3d LINE L1 1 111 -5780 3019 227 65 35 chr20 42837 44752 -66623253 + L1MCc LINE L1 2175 4145 -2796 2267 105 0 0 chr20 44760 45055 -66622950 - AluSg SINE Alu -15 295 1 392 283 27 36 chr20 45127 45346 -66622659 - L1M4 LINE L1 -3076 3070 2854 22 35 0 0 chr20 45346 45375 -66622630 + AT_rich Low_complexity Low_complexity 1 29 0 1230 265 51 14 chr20 45503 45668 -66622337 - L1M4 LINE L1 -3372 2774 2617 2306 80 3 13 chr20 45668 45969 -66622036 - AluSg SINE Alu -12 298 1 1230 265 51 14 chr20 45969 46237 -66621768 - L1M4 LINE L1 -3529 2617 2325 1308 125 41 108 chr20 46326 46485 -66621520 + L1MCa LINE L1 1164 1332 -5094 4908 55 16 0 chr20 46485 47107 -66620898 + L1PA8 LINE L1 5541 6172 0 1308 125 41 108 chr20 47107 47316 -66620689 + L1MCa LINE L1 1332 1507 -4919 5793 166 18 12 chr20 47393 48655 -66619350 - L1M1 LINE L1 -871 5432 4057 25629 29 16 1 chr20 48662 54708 -66613297 + L1PA2 LINE L1 1 6172 0 3244 169 35 27 chr20 54708 54776 -66613229 - L1M1 LINE L1 -2079 4067 4001 2282 99 6 10 chr20 54776 55089 -66612916 - AluSq SINE Alu -1 312 1 3244 169 35 27 chr20 55089 55795 -66612210 - L1M1 LINE L1 -2145 4001 3287 1133 164 55 14 chr20 55799 56165 -66611840 + L1M2 LINE L1 2647 3027 -3821 317 175 6 186 chr20 56193 56376 -66611629 + L1PBb LINE L1 711 860 -5344 1053 261 34 0 chr20 56392 56687 -66611318 + L1PA15-16 LINE L1 1265 1569 -5280 689 259 0 0 chr20 56667 56833 -66611172 + L1PA15-16 LINE L1 1336 1501 -5349 * 4654 238 24 76 chr20 56862 57675 -66610330 + L1PA15-16 LINE L1 1271 2125 -4724 2081 129 0 22 chr20 57675 58012 -66609993 - AluSx SINE Alu 0 312 1 4654 238 24 76 chr20 58012 59236 -66608769 + L1PA15-16 LINE L1 2125 3208 -3641 873 114 8 0 chr20 59237 59369 -66608636 + L1PB4 LINE L1 6016 6148 -8 430 215 15 74 chr20 59400 59535 -66608470 + L1ME1 LINE L1 5461 5587 -579 306 73 0 0 chr20 59536 59577 -66608428 + (T)n Simple_repeat Simple_repeat 1 41 0 1567 252 29 41 chr20 59743 60323 -66607682 + L1ME1 LINE L1 5588 6160 -6 357 314 43 24 chr20 62074 62402 -66605603 - L1ME4a LINE L1 -211 5910 5577 438 269 71 25 chr20 63093 63290 -66604715 + L2 LINE L2 3104 3309 -4 195 129 0 0 chr20 64295 64326 -66603679 + (CAA)n Simple_repeat Simple_repeat 1 31 0 821 214 65 0 chr20 64682 64850 -66603155 - MER5A DNA MER1_type -9 180 2 225 194 65 32 chr20 64963 65025 -66602980 - MIR SINE MIR -77 185 122 298 370 92 31 chr20 65691 66072 -66601933 + L2 LINE L2 2554 2957 -357 185 401 28 14 chr20 66623 66765 -66601240 + MIR SINE MIR 8 151 -111 299 362 97 16 chr20 67368 67553 -66600452 + MIR SINE MIR 5 204 -58 456 274 74 112 chr20 68105 68529 -66599476 + L1MDa LINE L1 505 855 -5685 4465 169 39 30 chr20 68774 69880 -66598125 - L1MA9 LINE L1 -30 6282 5167 1059 217 10 20 chr20 69881 70180 -66597825 + L1MA9 LINE L1 4849 5144 -1002 2821 198 90 57 chr20 70192 70243 -66597762 + L1MDa LINE L1 1227 1275 -5265 2317 98 0 19 chr20 70243 70558 -66597447 + AluY SINE Alu 1 309 -2 2821 198 90 57 chr20 70558 71382 -66596623 + L1MDa LINE L1 1275 2152 -4388 1503 159 53 4 chr20 71382 71646 -66596359 - AluJb SINE Alu -1 311 35 2821 198 90 57 chr20 71646 71923 -66596082 + L1MDa LINE L1 2152 2418 -4122 1046 262 36 13 chr20 71924 72221 -66595784 + L1MDa LINE L1 2479 2768 -3772 1708 140 70 7 chr20 72221 72507 -66595498 + AluJb SINE Alu 1 304 -8 1046 262 36 13 chr20 72507 72650 -66595355 + L1MDa LINE L1 2768 3078 -3462 * 1234 251 61 30 chr20 72645 73107 -66594898 + L1MD2 LINE L1 5631 6106 -253 434 223 19 0 chr20 73170 73273 -66594732 + MER3 DNA MER1_type 2 106 -103 632 250 36 12 chr20 73282 73450 -66594555 + MIR SINE MIR 88 259 -3 458 339 79 83 chr20 73502 73998 -66594007 - L1MEd LINE L1 -5373 746 253 329 305 63 26 chr20 74105 74418 -66593587 - L1MDa LINE L1 -3819 2721 2395 277 127 36 0 chr20 75010 75065 -66592940 - L1MB3 LINE L1 0 6183 6127 2832 118 42 16 chr20 75067 75566 -66592439 - L1MA5 LINE L1 0 6300 5789 239 133 22 0 chr20 75634 75679 -66592326 + (TA)n Simple_repeat Simple_repeat 2 47 0 574 176 0 0 chr20 75679 75781 -66592224 - L1 LINE L1 -1197 4949 4848 288 0 0 0 chr20 76629 76661 -66591344 + (TG)n Simple_repeat Simple_repeat 1 32 0 319 286 224 5 chr20 76666 76862 -66591143 + MIR SINE MIR 11 249 -13 192 40 0 0 chr20 78453 78478 -66589527 + (TTG)n Simple_repeat Simple_repeat 3 27 0 377 283 0 0 chr20 78807 78899 -66589106 + L1MD3 LINE L1 6805 6896 -1099 7387 30 0 0 chr20 78899 79814 -66588191 - L1PA2 LINE L1 -1932 4214 3300 9657 30 5 0 chr20 79816 81746 -66586259 + L1PA2 LINE L1 4222 6155 0 1827 199 147 104 chr20 81748 81970 -66586035 + L1MC3 LINE L1 6871 7082 -703 304 259 0 12 chr20 81970 82051 -66585954 + MLT1I LTR MaLR 35 114 -453 1827 199 147 104 chr20 82051 82619 -66585386 + L1MC3 LINE L1 7082 7778 -7 354 312 70 14 chr20 82692 83061 -66584944 - L1M4 LINE L1 -2576 3570 3181 470 246 53 91 chr20 83084 83166 -66584839 + MLT1I LTR MaLR 104 188 -221 2085 131 3 0 chr20 83166 83457 -66584548 + AluSx SINE Alu 7 298 -14 470 246 53 91 chr20 83457 83659 -66584346 + MLT1I LTR MaLR 188 377 -32 21 0 0 0 chr20 83662 83683 -66584322 + AT_rich Low_complexity Low_complexity 1 21 0 471 35 0 0 chr20 83772 83829 -66584176 + (CA)n Simple_repeat Simple_repeat 2 58 0 272 133 0 0 chr20 83874 83919 -66584086 - L1MB7 LINE L1 -31 6153 6109 293 308 48 10 chr20 83919 84127 -66583878 - L1M4 LINE L1 -3021 3125 2910 344 163 36 104 chr20 85189 85248 -66582757 + L1MEc LINE L1 2521 2582 -3958 2237 124 12 15 chr20 85248 85586 -66582419 + MER1B DNA MER1_type 1 337 0 344 163 36 104 chr20 85586 85678 -66582327 + L1MEc LINE L1 2582 2644 -3896 3799 189 72 31 chr20 85684 86298 -66581707 - L1MA9 LINE L1 -38 6274 5602 1458 187 48 31 chr20 86298 86587 -66581418 - AluJo SINE Alu -18 294 1 3799 189 72 31 chr20 86587 86952 -66581053 - L1MA9 LINE L1 -710 5602 5254 642 248 95 5 chr20 87010 87220 -66580785 + L1MEc LINE L1 2712 2940 -3600 2614 229 39 35 chr20 87223 87962 -66580043 + L1M3b LINE L1 1 742 -5539 496 273 9 90 chr20 87943 88188 -66579817 + L1M3b LINE L1 599 794 -5487 * 2100 203 107 39 chr20 88241 88858 -66579147 + L1MD2 LINE L1 5680 6338 -21 700 260 25 15 chr20 89201 89397 -66578608 - MLT1H LTR MaLR -196 353 156 560 133 0 50 chr20 89875 89995 -66578010 - L1PA15 LINE L1 0 6165 6052 289 132 0 0 chr20 90022 90075 -66577930 - L1MA9 LINE L1 -35 6277 6225 867 175 18 0 chr20 90155 90326 -66577679 - L1MA9 LINE L1 -45 6267 6094 2394 77 0 3 chr20 90336 90646 -66577359 - AluY SINE Alu -2 309 1 2112 133 0 0 chr20 90646 90948 -66577057 - AluSx SINE Alu -10 302 1 1099 82 0 0 chr20 90949 91083 -66576922 - AluSq/x SINE Alu -179 134 1 1510 164 40 0 chr20 91083 91381 -66576624 - L1MA9 LINE L1 -209 6103 5794 344 91 36 0 chr20 91383 91438 -66576567 + L1MA9 LINE L1 5731 5787 -393 3385 73 0 9 chr20 91469 91921 -66576084 + LTR7 LTR ERV1 1 448 -2 6478 96 28 41 chr20 91924 93481 -66574524 + HERVH LTR ERV1 1 1855 -5858 5393 107 1 9 chr20 93481 94334 -66573671 + HERVH LTR ERV1 2142 2987 -4726 855 134 13 0 chr20 94328 94477 -66573528 + HERVH LTR ERV1 3140 3290 -4423 * 3245 101 0 10 chr20 94467 94974 -66573031 + HERVH LTR ERV1 3492 3993 -3720 1261 89 0 0 chr20 94976 95156 -66572849 + HERVH LTR ERV1 4488 4667 -3046 * 13577 76 4 7 chr20 95152 97104 -66570901 + HERVH LTR ERV1 5769 7713 0 1872 74 4 11 chr20 97104 97373 -66570632 + LTR7 LTR ERV1 1 267 -183 728 291 191 48 chr20 97870 98935 -66569070 + L2 LINE L2 1758 2974 -340 235 200 53 80 chr20 99119 99194 -66568811 + L2 LINE L2 3185 3257 -15 203 326 128 29 chr20 99342 99514 -66568491 + L3 LINE CR1 875 1063 -514 256 289 72 31 chr20 99680 99777 -66568228 + MIR3 SINE MIR 93 193 -15 195 282 123 58 chr20 100319 100798 -66567207 + L2 LINE L2 1697 2206 -1108 707 221 24 61 chr20 100838 101051 -66566954 + MER58A DNA MER1_type 19 223 -1 2378 101 0 3 chr20 101391 101697 -66566308 - AluSx SINE Alu -7 305 1 273 272 0 48 chr20 101777 101880 -66566125 + L2 LINE L2 2996 3093 -179 2281 97 0 3 chr20 102228 102527 -66565478 - AluSq SINE Alu -15 298 1 336 323 31 0 chr20 102826 102922 -66565083 + L2 LINE L2 3136 3234 -38 1915 106 25 21 chr20 103238 103552 -66564453 - AluY SINE Alu 0 315 1 459 251 29 12 chr20 103582 103753 -66564252 - AluJb SINE Alu -21 291 118 357 256 0 0 chr20 103912 104037 -66563968 + T-rich Low_complexity Low_complexity 1 125 0 289 368 0 23 chr20 104042 104175 -66563830 + CT-rich Low_complexity Low_complexity 6 135 0 4852 124 4 13 chr20 104299 105066 -66562939 + HERVH LTR ERV1 2228 2987 -4726 924 134 13 0 chr20 105060 105209 -66562796 + HERVH LTR ERV1 3140 3290 -4423 * 3494 99 0 10 chr20 105199 105706 -66562299 + HERVH LTR ERV1 3492 3993 -3720 1336 95 16 0 chr20 105708 105898 -66562107 + HERVH LTR ERV1 4488 4680 -3033 * 14645 74 4 7 chr20 105884 107836 -66560169 + HERVH LTR ERV1 5769 7713 0 3562 76 7 7 chr20 107836 108284 -66559721 + LTR7 LTR ERV1 1 448 -2 1177 192 5 5 chr20 108288 108496 -66559509 + L1PA16 LINE L1 5937 6144 -22 1864 156 20 3 chr20 108507 108802 -66559203 + AluJo SINE Alu 1 300 -12 3568 133 70 23 chr20 108836 108901 -66559104 - L1MA8 LINE L1 -170 6121 6061 2080 141 0 3 chr20 108901 109200 -66558805 - AluSq SINE Alu -12 301 4 3568 133 70 23 chr20 109200 109745 -66558260 - L1MA8 LINE L1 -230 6061 5482 * 5230 172 81 3 chr20 109740 110768 -66557237 - L1MA8 LINE L1 -1397 4749 3642 1695 121 4 0 chr20 110877 111126 -66556879 + L1MA4 LINE L1 6046 6295 -5 42 77 0 0 chr20 111127 111218 -66556787 + AT_rich Low_complexity Low_complexity 1 91 0 180 0 0 0 chr20 111224 111244 -66556761 + (TAAAA)n Simple_repeat Simple_repeat 4 23 0 180 0 0 0 chr20 112531 112551 -66555454 + (CA)n Simple_repeat Simple_repeat 2 21 0 13224 204 25 19 chr20 112650 113048 -66554957 + L1PA16 LINE L1 1802 2196 -3970 270 0 0 0 chr20 113048 113078 -66554927 + (GAAAA)n Simple_repeat Simple_repeat 1 30 0 13224 204 25 19 chr20 113078 117013 -66550992 + L1PA16 LINE L1 2196 6157 -9 266 340 61 46 chr20 118483 118680 -66549325 - MIR SINE MIR -52 210 11 183 80 0 0 chr20 120097 120122 -66547883 + (T)n Simple_repeat Simple_repeat 1 25 0 2811 40 0 0 chr20 120122 120448 -66547557 - LTR17 LTR ERV1 -454 326 1 2458 51 0 0 chr20 120448 120740 -66547265 - HERV17 LTR ERV1 0 8626 8335 303 51 0 0 chr20 120730 120769 -66547236 - HERV17 LTR ERV1 -1078 7548 7510 * 24121 47 1 3 chr20 120762 123598 -66544407 - HERV17 LTR ERV1 -2607 6019 3190 1377 103 0 0 chr20 124157 124331 -66543674 - AluSx SINE Alu -138 174 1 198 0 0 0 chr20 124335 124357 -66543648 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 211 342 26 44 chr20 125034 125148 -66542857 + L2 LINE L2 2992 3103 -169 369 43 0 0 chr20 125176 125223 -66542782 + (TG)n Simple_repeat Simple_repeat 1 47 0 5834 93 19 7 chr20 125225 126033 -66541972 - L1PA15 LINE L1 -6 7578 6762 3680 153 2 8 chr20 126032 126664 -66541341 - L1PA12 LINE L1 -1255 6310 5683 * 6384 94 9 48 chr20 126664 127248 -66540757 + L1PA12 LINE L1 6342 6947 -640 2177 121 0 3 chr20 127248 127553 -66540452 + AluSq SINE Alu 1 304 -9 6384 94 9 48 chr20 127553 128127 -66539878 + L1PA12 LINE L1 6947 7453 -134 2106 132 0 0 chr20 128127 128415 -66539590 + AluSx SINE Alu 1 288 -24 6384 94 9 48 chr20 128415 128545 -66539460 + L1PA12 LINE L1 7453 7587 0 1156 113 13 0 chr20 128570 128729 -66539276 - AluSq SINE Alu -7 306 146 11863 176 35 17 chr20 128735 130908 -66537097 - L1PA15 LINE L1 -5341 2224 12 2030 276 178 15 chr20 130908 131095 -66536910 - L2 LINE L2 -10 3303 3148 1935 122 52 0 chr20 131095 131383 -66536622 + AluSq SINE Alu 1 303 -10 2030 276 178 15 chr20 131383 132373 -66535632 - L2 LINE L2 -165 3148 1921 474 340 29 13 chr20 132394 132632 -66535373 - MIR SINE MIR -19 243 2 3562 59 2 0 chr20 132911 133332 -66534673 - L1PA5 LINE L1 0 6154 5733 4392 36 13 0 chr20 133332 133860 -66534145 + L1P LINE L1 4186 4720 -1426 2857 133 6 1 chr20 135132 135617 -66532388 + L1PA14 LINE L1 5631 6131 0 22 35 0 0 chr20 136340 136369 -66531636 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 136626 136647 -66531358 + AT_rich Low_complexity Low_complexity 1 21 0 294 192 19 87 chr20 136648 136752 -66531253 - L1ME LINE L1 -5069 1001 905 * 3279 257 56 26 chr20 136745 137716 -66530289 + L1M4 LINE L1 3191 4206 -1940 2379 117 8 8 chr20 137716 138074 -66529931 - L1MA3 LINE L1 0 6305 5948 3279 257 56 26 chr20 138074 138294 -66529711 + L1M4 LINE L1 4206 4418 -1728 342 208 72 13 chr20 138974 139091 -66528914 - MLT1I LTR MaLR -236 173 46 2405 149 8 0 chr20 139252 139614 -66528391 - MER47A DNA MER2_type -1 365 1 1795 159 28 7 chr20 139729 140012 -66527993 - AluJo SINE Alu -23 289 1 242 317 33 33 chr20 140937 141057 -66526948 - MIR SINE MIR -73 135 16 1103 203 20 0 chr20 141263 141460 -66526545 - MER105 DNA DNA -3 201 1 384 357 116 40 chr20 141735 142419 -66525586 + L2 LINE L2 227 1002 -2312 2267 65 0 4 chr20 142419 142695 -66525310 - AluY SINE Alu 0 311 37 384 357 116 40 chr20 142695 142942 -66525063 + L2 LINE L2 1002 1229 -2085 211 255 0 20 chr20 143004 143055 -66524950 + L2 LINE L2 3200 3249 -64 * 516 255 62 14 chr20 143027 143172 -66524833 + L2 LINE L2 3161 3312 -1 212 343 29 20 chr20 143223 143325 -66524680 - L2 LINE L2 -226 3046 2944 933 254 49 58 chr20 143566 143913 -66524092 + Charlie1a DNA MER1_type 1 344 -1111 712 260 46 23 chr20 144003 144222 -66523783 + MER93a LTR ERV1 61 284 -118 1112 152 0 0 chr20 144227 144392 -66523613 - AluJo/FRAM SINE Alu -15 297 133 1822 132 0 60 chr20 144393 144711 -66523294 - AluJb SINE Alu -13 299 1 659 175 0 32 chr20 144712 144838 -66523167 + MER93a LTR ERV1 281 402 0 1257 236 19 0 chr20 144840 145107 -66522898 + Charlie1a DNA MER1_type 344 615 -840 1072 268 231 25 chr20 145107 145548 -66522457 + MLT1G1 LTR MaLR 56 587 -8 652 215 73 11 chr20 146053 146230 -66521775 + Charlie1 DNA MER1_type 1463 1650 -1111 924 195 52 0 chr20 146969 147123 -66520882 + FAM SINE Alu 1 162 -13 360 148 0 0 chr20 147125 147186 -66520819 + (TG)n Simple_repeat Simple_repeat 2 62 0 322 235 15 125 chr20 147353 147489 -66520516 + L2 LINE L2 3192 3312 -1 2410 93 3 3 chr20 147745 148058 -66519947 - AluSq SINE Alu 0 313 1 1002 216 64 0 chr20 148721 148925 -66519080 + L1M1 LINE L1 562 778 -6787 8906 169 43 36 chr20 148932 150738 -66517267 + L1M1 LINE L1 1680 3497 -4068 801 131 17 17 chr20 150749 150924 -66517081 + GA-rich Low_complexity Low_complexity 1 175 0 4322 194 9 9 chr20 150924 150954 -66517051 + L1M1 LINE L1 3462 3490 -4075 360 0 0 0 chr20 150954 150994 -66517011 + (GGAA)n Simple_repeat Simple_repeat 1 40 0 4322 194 9 9 chr20 150994 151958 -66516047 + L1M1 LINE L1 3490 4461 -3104 8743 119 14 4 chr20 152043 153320 -66514685 + HSMAR2 DNA Mariner 12 1301 -1 383 323 161 0 chr20 153368 153523 -66514482 - MER5A DNA MER1_type 0 189 10 516 244 85 98 chr20 153532 154154 -66513851 + L1M4 LINE L1 2876 3489 -2657 4683 79 7 19 chr20 155235 155853 -66512152 + L1PA12 LINE L1 5552 6161 -7 2234 100 0 17 chr20 156146 156445 -66511560 + AluSx SINE Alu 1 294 -18 1269 78 72 26 chr20 157125 157318 -66510687 - L1PA10 LINE L1 -11 6157 5956 295 219 14 14 chr20 157760 157833 -66510172 + MIR SINE MIR 78 150 -112 981 168 24 64 chr20 159608 159639 -66508366 - MER33 DNA MER1_type -2341 244 213 2351 97 3 0 chr20 159639 159938 -66508067 - AluSg SINE Alu -10 300 1 981 168 24 64 chr20 159938 160156 -66507849 - MER33 DNA MER1_type -2372 213 5 408 336 0 20 chr20 160253 160399 -66507606 + MIR SINE MIR 5 147 -115 869 169 0 0 chr20 160490 160638 -66507367 - L1MA10 LINE L1 -2 6332 6185 2919 159 224 32 chr20 160639 161174 -66506831 + L1 LINE L1 4217 4648 -1498 2255 59 3 21 chr20 161174 161506 -66506499 + AluY SINE Alu 1 327 0 2919 159 224 32 chr20 161506 161743 -66506262 + L1 LINE L1 4648 5138 -1008 358 226 11 11 chr20 162284 162377 -66505628 + MLT1J LTR MaLR 24 116 -395 1601 177 6 51 chr20 162619 162930 -66505075 + AluJo SINE Alu 1 297 -15 2314 114 0 0 chr20 162933 163241 -66504764 + AluSq SINE Alu 1 308 -5 9628 86 30 13 chr20 163481 163575 -66504430 + HSMAR1 DNA Mariner 1 92 -1195 2352 86 3 0 chr20 163575 163876 -66504129 - AluSp SINE Alu -11 302 1 9628 86 30 13 chr20 163876 165046 -66502959 + HSMAR1 DNA Mariner 92 1287 0 1907 185 45 24 chr20 165715 166093 -66501912 + MLT1B LTR MaLR 5 390 0 1140 164 0 44 chr20 166160 166343 -66501662 + FAM SINE Alu 1 175 0 2410 99 0 0 chr20 166390 166694 -66501311 - AluSq SINE Alu -9 304 1 196 243 54 0 chr20 167036 167110 -66500895 - L2 LINE L2 -1908 1406 1329 497 255 60 0 chr20 167579 167728 -66500277 - MIR SINE MIR -23 239 82 2188 90 0 4 chr20 168015 168293 -66499712 + AluSg SINE Alu 26 302 -8 184 384 48 0 chr20 168583 168708 -66499297 + L3 LINE CR1 471 601 -976 1082 140 12 0 chr20 168717 168881 -66499124 + AluSg/x SINE Alu 136 301 -9 367 314 164 5 chr20 168908 169115 -66498890 - MIR SINE MIR -15 247 8 2366 94 0 0 chr20 169225 169522 -66498483 + AluY SINE Alu 1 297 -14 206 367 83 0 chr20 169663 169783 -66498222 + L3 LINE CR1 1056 1185 -392 262 292 92 36 chr20 170522 170913 -66497092 - L1ME4a LINE L1 -3 6118 5706 245 306 92 19 chr20 171532 171738 -66496267 + L1MC4a LINE L1 6047 6267 -1541 1868 213 104 65 chr20 171977 172277 -66495728 + L1MC5 LINE L1 6617 6904 -1057 4106 116 24 2 chr20 172277 172874 -66495131 + L1MA9 LINE L1 5701 6310 -2 1868 213 104 65 chr20 172874 172950 -66495055 + L1MC5 LINE L1 6904 6976 -985 2130 131 6 10 chr20 172950 173262 -66494743 + AluSx SINE Alu 1 311 -1 1868 213 104 65 chr20 173262 173653 -66494352 + L1MC5 LINE L1 6976 7415 -546 440 219 116 0 chr20 174284 174439 -66493566 + L1MC5 LINE L1 7475 7647 -314 27 49 0 0 chr20 174441 174482 -66493523 + AT_rich Low_complexity Low_complexity 1 41 0 2189 117 0 16 chr20 174510 174818 -66493187 - AluSx SINE Alu -9 303 1 3620 179 52 20 chr20 174834 174870 -66493135 - L1MA9 LINE L1 -37 6275 6242 285 29 0 0 chr20 174870 174904 -66493101 + (TA)n Simple_repeat Simple_repeat 1 34 0 261 0 0 0 chr20 174903 174932 -66493073 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 3620 179 52 20 chr20 174904 175629 -66492376 - L1MA9 LINE L1 -70 6242 5519 680 249 25 35 chr20 175657 175858 -66492147 + L1MC5 LINE L1 7715 7913 -48 2754 102 14 3 chr20 175865 176236 -66491769 - THE1C LTR MaLR 0 375 1 180 0 0 0 chr20 176417 176437 -66491568 + (CA)n Simple_repeat Simple_repeat 1 20 0 1178 232 185 25 chr20 176489 176856 -66491149 - MLT1H LTR MaLR 0 549 124 498 33 0 0 chr20 176939 176999 -66491006 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 226 253 120 13 chr20 177454 177604 -66490401 + L1M4 LINE L1 2875 3040 -3106 27 81 0 0 chr20 177767 177829 -66490176 + AT_rich Low_complexity Low_complexity 1 62 0 2201 112 0 3 chr20 177891 178186 -66489819 + AluSc SINE Alu 1 294 -15 2224 112 0 0 chr20 178237 178533 -66489472 + AluSq SINE Alu 1 296 -17 312 327 10 55 chr20 178544 178566 -66489439 + L1MC4a LINE L1 5708 5729 -2079 2380 102 0 0 chr20 178566 178870 -66489135 + AluSx SINE Alu 1 304 -8 312 327 10 55 chr20 178870 179046 -66488959 + L1MC4a LINE L1 5729 5897 -1911 2492 227 58 42 chr20 179074 179364 -66488641 - L1ME1 LINE L1 -15 6151 5867 2729 151 26 7 chr20 179364 179782 -66488223 + MSTA LTR MaLR 1 426 -2 2492 227 58 42 chr20 179782 179956 -66488049 - L1ME1 LINE L1 -299 5867 5697 2066 126 22 0 chr20 179956 180257 -66487748 + AluSx SINE Alu 1 307 0 2492 227 58 42 chr20 180257 180483 -66487522 - L1ME1 LINE L1 -469 5697 5448 200 158 40 53 chr20 180545 180621 -66487384 + A-rich Low_complexity Low_complexity 3 77 0 3671 167 60 19 chr20 180718 181399 -66486606 + MER67C LTR ERV1 2 710 0 375 23 0 0 chr20 181419 181463 -66486542 + (CA)n Simple_repeat Simple_repeat 1 44 0 474 217 104 17 chr20 181465 181580 -66486425 + MER50 LTR ERV1 10 134 -600 2115 131 0 0 chr20 181580 181877 -66486128 + AluSx SINE Alu 7 303 -9 1850 142 37 0 chr20 181877 182173 -66485832 - L1PB4 LINE L1 -233 5923 5617 1091 126 0 0 chr20 182174 182325 -66485680 + AluSg/x SINE Alu 146 296 -14 3728 117 36 6 chr20 182326 182874 -66485131 - MER4E-int LTR ERV1 -6193 565 1 1684 50 0 0 chr20 182874 183072 -66484933 - MER4E LTR ERV1 0 766 569 2997 87 36 42 chr20 183101 183399 -66484606 - MER4E LTR ERV1 -298 468 173 2420 74 0 0 chr20 183399 183698 -66484307 - AluY SINE Alu -12 299 1 2997 87 36 42 chr20 183698 183870 -66484135 - MER4E LTR ERV1 -593 173 1 283 124 0 169 chr20 183870 183957 -66484048 + MLT2C2 LTR ERVL 393 464 0 2997 103 81 48 chr20 183993 184067 -66483938 + L1MA5 LINE L1 5788 5858 -442 2209 127 18 26 chr20 184067 184407 -66483598 - MER1B DNA MER1_type 0 337 1 2997 103 81 48 chr20 184407 184506 -66483499 + L1MA5 LINE L1 5858 5952 -348 2308 98 3 0 chr20 184506 184803 -66483202 + AluSx SINE Alu 1 298 -14 2997 103 81 48 chr20 184803 185125 -66482880 + L1MA5 LINE L1 5952 6300 0 21 36 0 0 chr20 185125 185153 -66482852 + AT_rich Low_complexity Low_complexity 1 28 0 614 226 39 89 chr20 185204 185249 -66482756 + L1MC4 LINE L1 7688 7734 -308 252 0 0 0 chr20 185249 185277 -66482728 + (TA)n Simple_repeat Simple_repeat 2 29 0 614 226 39 89 chr20 185277 185488 -66482517 + L1MC4 LINE L1 7734 7931 -111 21 57 0 0 chr20 185620 185655 -66482350 + AT_rich Low_complexity Low_complexity 1 35 0 189 0 0 0 chr20 185985 186006 -66481999 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 539 29 14 0 chr20 186415 186484 -66481521 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 209 83 28 0 chr20 186485 186521 -66481484 + (CATA)n Simple_repeat Simple_repeat 4 40 0 754 287 78 25 chr20 186601 186922 -66481083 - L1ME LINE L1 -297 5824 5487 191 130 0 22 chr20 187791 187837 -66480168 + (GA)n Simple_repeat Simple_repeat 2 46 0 915 284 68 53 chr20 188963 189417 -66478588 - LTR16B LTR ERVL -2 462 2 2056 224 13 35 chr20 190352 190616 -66477389 - L1ME2 LINE L1 -301 5863 5612 2168 73 4 18 chr20 190616 190930 -66477075 - AluSp SINE Alu 0 325 16 2056 224 13 35 chr20 190930 191181 -66476824 - L1ME2 LINE L1 -552 5612 5357 460 251 19 103 chr20 191203 191350 -66476655 + L1ME1 LINE L1 5915 6030 -136 2564 47 7 0 chr20 191350 191648 -66476357 + AluY SINE Alu 1 300 -11 460 251 19 103 chr20 191648 191771 -66476234 + L1ME1 LINE L1 6030 6162 -4 25 0 0 0 chr20 191773 191798 -66476207 + AT_rich Low_complexity Low_complexity 1 25 0 613 288 68 50 chr20 191910 192335 -66475670 + L1ME LINE L1 5289 5728 -393 * 3669 148 44 0 chr20 192323 192910 -66475095 + L1M1 LINE L1 1 613 -6952 384 22 0 0 chr20 192910 192955 -66475050 + (TG)n Simple_repeat Simple_repeat 1 45 0 252 32 0 0 chr20 192955 192986 -66475019 - AluYa5 SINE Alu -106 195 165 2519 179 155 22 chr20 192986 193579 -66474426 + MER52A LTR ERV1 1 672 -1083 38 0 0 0 chr20 193776 193814 -66474191 + AT_rich Low_complexity Low_complexity 1 38 0 33 0 0 0 chr20 194201 194234 -66473771 + AT_rich Low_complexity Low_complexity 1 33 0 2300 103 3 7 chr20 194444 194754 -66473251 - AluSg SINE Alu -1 309 1 1282 134 216 17 chr20 195042 195297 -66472708 + AluSg1 SINE Alu 2 302 0 1018 204 16 0 chr20 195307 195498 -66472507 + MLT1E2 LTR MaLR 272 465 -161 520 200 27 0 chr20 195658 195768 -66472237 - L1PBa LINE L1 -6316 547 435 * 746 219 6 0 chr20 195764 195924 -66472081 - L1PBa LINE L1 -6697 166 6 505 186 0 0 chr20 195947 196033 -66471972 - L1MA7 LINE L1 -342 5949 5864 346 287 114 31 chr20 196035 196359 -66471646 - L2 LINE L2 -133 3180 2830 962 158 113 0 chr20 196864 197041 -66470964 + L1PB4 LINE L1 5958 6154 -2 2358 82 7 0 chr20 197243 197546 -66470459 + AluSx SINE Alu 1 305 -7 1919 209 125 48 chr20 197776 198344 -66469661 + MER76 LTR ERV 6 629 -59 2008 150 0 0 chr20 198344 198638 -66469367 - AluJb SINE Alu -18 294 1 1919 209 125 48 chr20 198638 198701 -66469304 + MER76 LTR ERV 629 686 -2 607 242 13 46 chr20 198723 198876 -66469129 + MIR SINE MIR 61 208 -54 230 305 86 86 chr20 198999 199117 -66468888 + MLT1K LTR MaLR 125 242 -346 2130 130 0 7 chr20 199117 199418 -66468587 - AluSx SINE Alu -13 299 1 230 305 86 86 chr20 199418 199673 -66468332 + MLT1K LTR MaLR 241 498 -90 790 261 29 0 chr20 199782 199989 -66468016 - LTR16A LTR ERVL -8 442 230 492 208 0 0 chr20 200408 200514 -66467491 + GA-rich Low_complexity Low_complexity 2 107 0 423 83 0 0 chr20 200861 200921 -66467084 + (CA)n Simple_repeat Simple_repeat 1 60 0 202 313 152 0 chr20 201028 201127 -66466878 + MIR SINE MIR 22 135 -127 332 233 242 0 chr20 201168 201288 -66466717 + MIR SINE MIR 114 262 0 229 111 48 63 chr20 201579 201642 -66466363 + L1MC5 LINE L1 7870 7931 -30 719 303 82 64 chr20 201645 201792 -66466213 + L2 LINE L2 2214 2357 -957 1625 138 52 11 chr20 201792 202083 -66465922 - AluJo SINE Alu 0 305 4 719 303 82 64 chr20 202083 202409 -66465596 + L2 LINE L2 2357 2708 -606 1933 166 0 0 chr20 202409 202705 -66465300 - AluJb SINE Alu -16 296 1 719 303 82 64 chr20 202705 202945 -66465060 + L2 LINE L2 2708 2942 -372 281 214 0 57 chr20 202953 203023 -66464982 + MER5A DNA MER1_type 9 74 -115 2183 125 0 3 chr20 203024 203327 -66464678 + AluSx SINE Alu 1 302 -10 345 47 0 0 chr20 203327 203370 -66464635 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 507 127 56 8 chr20 203370 203496 -66464509 + GA-rich Low_complexity Low_complexity 1 132 0 289 248 229 0 chr20 203496 203601 -66464404 + MER5A DNA MER1_type 61 189 0 431 230 11 0 chr20 204120 204207 -66463798 + L2 LINE L2 2976 3063 -209 2352 90 0 40 chr20 204226 204547 -66463458 - AluSg1 SINE Alu -1 308 1 245 341 0 0 chr20 204765 204850 -66463155 + GA-rich Low_complexity Low_complexity 3 87 0 263 275 106 56 chr20 205132 205274 -66462731 - MIR3 SINE MIR -12 196 48 312 288 42 17 chr20 207012 207130 -66460875 + MIR3 SINE MIR 12 132 -76 211 196 107 0 chr20 207329 207385 -66460620 + MIR SINE MIR 34 95 -113 425 234 135 14 chr20 207394 207535 -66460470 + MIR SINE MIR 36 193 -69 281 232 72 0 chr20 207981 208050 -66459955 + MIR SINE MIR 139 212 -50 993 106 0 0 chr20 208372 208552 -66459453 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 21 57 0 0 chr20 208832 208867 -66459138 + GC_rich Low_complexity Low_complexity 1 35 0 337 309 67 6 chr20 208942 209107 -66458898 + MER104 DNA Tc2 6 180 0 2236 69 4 0 chr20 209120 209394 -66458611 + AluSg SINE Alu 1 275 -35 180 0 0 0 chr20 209400 209420 -66458585 + (TAA)n Simple_repeat Simple_repeat 2 21 0 192 189 54 0 chr20 209584 209621 -66458384 - MIR SINE MIR -153 109 71 530 256 89 49 chr20 209828 210074 -66457931 - MIR SINE MIR 0 262 7 500 328 22 6 chr20 210120 210300 -66457705 + MIR SINE MIR 10 192 -70 1712 196 0 3 chr20 210303 210614 -66457391 + AluJo SINE Alu 1 310 0 1113 168 0 0 chr20 210621 210788 -66457217 + AluJo SINE Alu 120 286 -26 459 243 52 95 chr20 210983 211127 -66456878 - MIR SINE MIR 0 262 128 1636 176 48 4 chr20 211127 211399 -66456606 + AluJb SINE Alu 1 284 -28 459 243 52 95 chr20 211399 211464 -66456541 - MIR SINE MIR -134 128 62 546 328 74 11 chr20 211594 211878 -66456127 + L2 LINE L2 3012 3313 0 190 317 0 0 chr20 211916 211957 -66456048 + MIR SINE MIR 15 55 -207 2227 110 0 3 chr20 212019 212311 -66455694 + AluSx SINE Alu 1 291 -21 2275 112 0 0 chr20 212740 213034 -66454971 - AluSx SINE Alu -18 294 1 567 286 22 32 chr20 213152 213337 -66454668 + MIR SINE MIR 48 230 -32 249 270 0 0 chr20 213940 214003 -66454002 + MIR SINE MIR 6 68 -194 2081 119 14 3 chr20 214004 214289 -66453716 + AluSx SINE Alu 1 288 -24 23 33 0 0 chr20 214289 214319 -66453686 + AT_rich Low_complexity Low_complexity 1 30 0 768 278 0 28 chr20 214319 214531 -66453474 + MIR SINE MIR 57 262 0 1906 106 31 0 chr20 215048 215304 -66452701 - AluSq SINE Alu -49 264 1 337 143 14 0 chr20 215594 215664 -66452341 - L1MD2 LINE L1 0 6359 6289 2174 113 0 39 chr20 215665 215976 -66452029 + AluSx SINE Alu 1 299 -13 255 125 0 0 chr20 215976 216016 -66451989 + (GGGGA)n Simple_repeat Simple_repeat 1 40 0 4873 210 13 37 chr20 216039 217077 -66450928 - L1MC4a LINE L1 -27 7781 6720 2073 113 70 0 chr20 217077 217361 -66450644 + AluSx SINE Alu 1 304 -8 4873 210 13 37 chr20 217361 217743 -66450262 - L1MC4a LINE L1 -1088 6720 4825 297 232 11 11 chr20 218191 218286 -66449719 + MER20B DNA MER1_type 653 747 -36 465 230 141 1 chr20 218286 218415 -66449590 - MIR SINE MIR -62 146 40 1415 272 25 31 chr20 218460 218905 -66449100 + MLT1J2 LTR MaLR 1 442 -8 576 278 119 16 chr20 219139 219333 -66448672 + MIR SINE MIR 49 262 0 243 268 134 0 chr20 219507 219589 -66448416 - MIR SINE MIR -73 135 43 189 0 0 0 chr20 219994 220015 -66447990 + (T)n Simple_repeat Simple_repeat 1 21 0 1566 196 206 141 chr20 220286 220669 -66447336 + L2 LINE L2 1277 1634 -1680 687 228 0 24 chr20 220669 220836 -66447169 + AluJb SINE Alu 136 298 -14 1566 196 206 141 chr20 220836 221485 -66446520 + L2 LINE L2 1634 2553 -761 2417 88 0 13 chr20 221950 222257 -66445748 + AluSq SINE Alu 1 303 -10 803 268 78 70 chr20 222269 222746 -66445259 + MLT1L LTR MaLR 3 488 -127 1566 199 10 30 chr20 222746 223043 -66444962 + AluJo SINE Alu 1 291 -21 803 268 78 70 chr20 223043 223169 -66444836 + MLT1L LTR MaLR 488 611 -4 508 237 21 82 chr20 223179 223373 -66444632 + MLT1J LTR MaLR 330 511 0 2403 91 3 0 chr20 223504 223801 -66444204 - AluSp SINE Alu -15 298 1 784 301 96 16 chr20 224648 225192 -66442813 + L1M4 LINE L1 4117 4703 -1443 466 304 72 24 chr20 225207 225414 -66442591 + MER102a DNA MER1_type 108 324 -6 236 361 9 0 chr20 225563 225671 -66442334 - L2 LINE L2 -2482 832 724 2565 50 3 0 chr20 225822 226124 -66441881 + AluY SINE Alu 1 303 -8 266 222 198 24 chr20 226163 226289 -66441716 + MIR SINE MIR 96 243 -19 23 0 0 0 chr20 226941 226964 -66441041 + GC_rich Low_complexity Low_complexity 1 23 0 29 0 0 0 chr20 227073 227102 -66440903 + GC_rich Low_complexity Low_complexity 1 29 0 25 51 0 0 chr20 227231 227270 -66440735 + GC_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr20 227475 227503 -66440502 + GC_rich Low_complexity Low_complexity 1 28 0 276 329 13 0 chr20 228598 228677 -66439328 + L2 LINE L2 3185 3264 -8 591 280 32 11 chr20 228917 229106 -66438899 - MIR3 SINE MIR 0 208 16 230 353 39 0 chr20 229950 230052 -66437953 + MER5B DNA MER1_type 66 171 -7 2373 93 0 0 chr20 231112 231403 -66436602 - AluSx SINE Alu -21 291 1 336 320 69 46 chr20 231431 231606 -66436399 - L2 LINE L2 -221 3051 2873 321 265 247 0 chr20 231702 231872 -66436133 - L2 LINE L2 0 3313 3102 947 326 64 29 chr20 232629 233188 -66434817 - L2 LINE L2 -513 2801 2223 595 212 72 63 chr20 233189 233411 -66434594 + MER112 DNA MER1_type 3 226 -34 322 319 47 0 chr20 233489 233658 -66434347 - L2 LINE L2 -1216 2098 1922 2582 44 7 0 chr20 233659 233954 -66434051 + AluY SINE Alu 1 297 -14 1535 132 0 14 chr20 234309 234521 -66433484 + AluSx SINE Alu 1 209 -103 4257 110 41 58 chr20 234587 235350 -66432655 + LTR1 LTR ERV1 36 785 0 598 106 0 21 chr20 235352 235446 -66432559 + AluSx SINE Alu 208 299 -13 1063 167 0 6 chr20 235666 235834 -66432171 - AluJo/FRAM SINE Alu -17 295 129 2307 60 0 106 chr20 235837 236185 -66431820 - AluY SINE Alu 0 311 1 476 176 0 38 chr20 236185 236316 -66431689 + CT-rich Low_complexity Low_complexity 1 126 0 760 201 145 52 chr20 236318 236567 -66431438 - AluJo SINE Alu 0 312 41 422 240 42 152 chr20 236596 236813 -66431192 + L1MC4a LINE L1 5834 6026 -1782 1741 165 33 0 chr20 237027 237332 -66430673 + AluJb SINE Alu 1 314 0 509 303 90 31 chr20 237587 237944 -66430061 + L2 LINE L2 2934 3311 -2 1553 269 95 15 chr20 238312 238858 -66429147 + MER115 DNA AcHobo 89 678 -15 475 248 65 13 chr20 238865 239018 -66428987 + MIR SINE MIR 63 223 -39 472 245 123 42 chr20 239170 239382 -66428623 - MIR SINE MIR -1 261 33 221 143 0 41 chr20 239556 239605 -66428400 + (TCCC)n Simple_repeat Simple_repeat 1 47 0 21 0 0 0 chr20 240150 240171 -66427834 + AT_rich Low_complexity Low_complexity 1 21 0 319 108 96 48 chr20 240685 240768 -66427237 - L1MC3 LINE L1 -6 7779 7693 1437 164 0 0 chr20 240773 240998 -66427007 - AluJb SINE Alu -4 308 84 885 157 8 111 chr20 241002 241237 -66426768 - L1MC3 LINE L1 -100 7685 7475 286 282 35 0 chr20 241312 241397 -66426608 - MLT1F1 LTR MaLR -443 124 37 2206 122 66 34 chr20 241398 241807 -66426198 - L1MC3 LINE L1 -687 7098 6677 213 39 0 0 chr20 241808 241834 -66426171 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 282 191 0 0 chr20 241834 241881 -66426124 - Alu SINE Alu -11 289 243 269 160 0 0 chr20 241994 242044 -66425961 + MER97a DNA MER1_type? 45 94 -800 1401 150 8 43 chr20 242046 242280 -66425725 - AluJo SINE Alu -86 226 1 3095 178 64 31 chr20 242281 242685 -66425320 - L1MC3 LINE L1 -1093 6692 6303 2123 128 0 28 chr20 242685 243005 -66425000 - AluJb SINE Alu -1 311 1 3095 178 64 31 chr20 243005 243229 -66424776 - L1MC3 LINE L1 -1482 6303 5745 249 225 144 38 chr20 243229 243389 -66424616 - L1MB5 LINE L1 -122 6052 5876 210 268 98 18 chr20 243396 243508 -66424497 - MIR SINE MIR -69 193 73 927 181 23 0 chr20 243579 243750 -66424255 - FAM SINE Alu 0 175 1 240 232 18 18 chr20 243753 243809 -66424196 - Charlie5 DNA MER1_type -2547 65 10 2276 107 0 0 chr20 243817 244106 -66423899 - AluSc SINE Alu -20 289 1 904 179 0 0 chr20 244152 244297 -66423708 + FRAM SINE Alu 21 165 -11 1831 140 49 3 chr20 244333 244618 -66423387 - AluJo SINE Alu -5 307 10 2259 122 3 0 chr20 244621 244933 -66423072 - AluSp SINE Alu 0 313 1 2014 106 33 0 chr20 245158 245463 -66422542 - AluY SINE Alu 0 314 1 1936 149 17 3 chr20 245472 245761 -66422244 - AluJo SINE Alu -19 293 1 2040 128 12 53 chr20 245761 246160 -66421845 + L1MB8 LINE L1 5790 6172 -6 1934 150 3 14 chr20 246340 246634 -66421371 + AluJo SINE Alu 1 291 -21 498 296 18 6 chr20 246740 246909 -66421096 - L2 LINE L2 -252 3061 2891 438 240 7 52 chr20 246947 246977 -66421028 + L1ME LINE L1 5639 5669 -452 2190 112 11 0 chr20 246977 247104 -66420901 + AluSc SINE Alu 1 125 -184 2389 69 0 23 chr20 247104 247407 -66420598 + AluY SINE Alu 1 296 -15 2190 112 11 0 chr20 247407 247566 -66420439 + AluSc SINE Alu 125 290 -19 438 240 7 52 chr20 247566 247665 -66420340 + L1ME LINE L1 5669 5763 -358 1926 122 4 0 chr20 247665 247927 -66420078 + AluSq SINE Alu 35 297 -16 438 240 7 52 chr20 247927 247950 -66420055 + L1ME LINE L1 5763 5785 -336 1901 170 0 3 chr20 248101 248395 -66419610 + AluJb SINE Alu 1 293 -19 2265 98 0 17 chr20 248395 248692 -66419313 + AluSg SINE Alu 1 292 -18 2275 80 4 0 chr20 248792 249067 -66418938 + AluSx SINE Alu 1 276 -36 357 43 0 0 chr20 249067 249114 -66418891 + (CA)n Simple_repeat Simple_repeat 1 47 0 2262 110 3 0 chr20 249410 249702 -66418303 + AluSg SINE Alu 1 293 -17 2685 199 26 17 chr20 249868 250410 -66417595 - MLT1F1 LTR MaLR 0 567 21 2495 59 0 13 chr20 250411 250718 -66417287 + AluY SINE Alu 1 303 -8 571 269 161 34 chr20 251027 251173 -66416832 + L2 LINE L2 2911 3037 -276 1954 162 10 0 chr20 251173 251475 -66416530 - AluJb SINE Alu -7 305 1 571 269 161 34 chr20 251475 251490 -66416515 + L2 LINE L2 3037 3049 -264 1640 174 8 0 chr20 251490 251755 -66416250 - AluJo SINE Alu -45 267 1 571 269 161 34 chr20 251755 251945 -66416060 + L2 LINE L2 3049 3308 -5 1610 167 41 11 chr20 252213 252513 -66415492 - AluJb SINE Alu 0 314 7 1984 127 39 7 chr20 252977 253260 -66414745 - AluSx SINE Alu -16 296 5 402 258 86 0 chr20 253274 253402 -66414603 - MIR SINE MIR -14 248 110 33 85 0 0 chr20 254895 254977 -66413028 + GC_rich Low_complexity Low_complexity 1 82 0 33 25 0 0 chr20 254997 255037 -66412968 + GC_rich Low_complexity Low_complexity 1 40 0 31 26 0 0 chr20 255232 255270 -66412735 + GC_rich Low_complexity Low_complexity 1 38 0 30 69 0 0 chr20 255393 255451 -66412554 + GC_rich Low_complexity Low_complexity 1 58 0 22 56 0 0 chr20 255705 255741 -66412264 + GC_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr20 255822 255845 -66412160 + GC_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr20 255984 256009 -66411996 + GC_rich Low_complexity Low_complexity 1 25 0 195 114 0 0 chr20 256023 256058 -66411947 + (GGA)n Simple_repeat Simple_repeat 1 35 0 180 0 0 0 chr20 257951 257971 -66410034 + (T)n Simple_repeat Simple_repeat 1 20 0 602 248 189 4 chr20 258319 258589 -66409416 - MER102b DNA MER1_type -1 340 21 292 254 295 8 chr20 258626 258748 -66409257 + MIR SINE MIR 16 172 -90 747 264 100 47 chr20 259360 259701 -66408304 + LTR16A LTR ERVL 92 450 0 193 179 0 0 chr20 260036 260075 -66407930 + MIR SINE MIR 81 119 -89 2287 171 51 127 chr20 260385 260838 -66407167 - MLT1E1 LTR MaLR 0 654 273 2300 90 3 3 chr20 260838 261149 -66406856 + AluSx SINE Alu 1 311 -1 2287 171 51 127 chr20 261149 261403 -66406602 - MLT1E1 LTR MaLR -381 273 1 961 176 0 34 chr20 261403 261579 -66406426 + AluJo SINE Alu 20 189 -123 1558 259 121 50 chr20 261584 262247 -66405758 + L2 LINE L2 2223 2982 -331 2062 123 3 7 chr20 262247 262548 -66405457 + AluSx SINE Alu 1 300 -12 1558 259 121 50 chr20 262548 262810 -66405195 + L2 LINE L2 2982 3224 -89 1770 148 7 20 chr20 262871 263169 -66404836 + AluJo SINE Alu 1 294 -18 319 364 52 44 chr20 263187 263437 -66404568 - L2 LINE L2 -26 3246 2995 1541 237 205 20 chr20 263437 263935 -66404070 + MLT1G LTR MaLR 1 590 0 829 173 0 0 chr20 264148 264281 -66403724 - FLAM_C SINE Alu 0 133 1 2134 121 0 0 chr20 264290 264587 -66403418 - AluSx SINE Alu -15 297 1 189 324 141 0 chr20 264589 264660 -66403345 + L2 LINE L2 2693 2773 -541 436 185 7 104 chr20 264813 264897 -66403108 + MIR3 SINE MIR 84 152 -56 2201 115 0 6 chr20 264897 265210 -66402795 - AluSx SINE Alu -1 311 1 436 185 7 104 chr20 265210 265260 -66402745 + MIR3 SINE MIR 152 205 -3 1214 56 11 11 chr20 265603 265781 -66402224 + (TTC)n Simple_repeat Simple_repeat 3 180 0 232 193 20 20 chr20 265792 265811 -66402194 - Alu SINE Alu -260 40 22 1666 109 4 0 chr20 265811 266049 -66401956 - AluSg/x SINE Alu 0 310 72 232 193 20 20 chr20 266049 266089 -66401916 - Alu SINE Alu -277 23 1 1887 146 0 10 chr20 266091 266392 -66401613 - AluSx SINE Alu -14 298 1 267 133 22 0 chr20 266392 266437 -66401568 - U6 snRNA snRNA -61 46 1 716 260 0 17 chr20 266479 266660 -66401345 - L2 LINE L2 0 3313 3136 476 239 89 33 chr20 266729 266909 -66401096 - LTR33A LTR ERVL -332 191 2 2225 78 3 0 chr20 267001 267283 -66400722 + AluSp SINE Alu 1 283 -30 4068 168 12 12 chr20 267337 267849 -66400156 - L1MB3 LINE L1 -11 6172 5658 1718 147 56 0 chr20 267849 268011 -66399994 - AluSx SINE Alu -11 301 115 390 21 0 0 chr20 268011 268058 -66399947 + (TG)n Simple_repeat Simple_repeat 2 48 0 1718 147 56 0 chr20 268058 268180 -66399825 - AluSx SINE Alu -197 115 1 4068 168 12 12 chr20 268180 268394 -66399611 - L1MB3 LINE L1 -524 5659 5446 1541 154 0 8 chr20 268440 268687 -66399318 - AluJo SINE Alu -47 265 21 2056 117 3 0 chr20 268763 269053 -66398952 + AluSq SINE Alu 1 291 -22 1229 91 24 62 chr20 269420 269630 -66398375 - AluSc SINE Alu -14 295 94 337 0 41 20 chr20 269630 269679 -66398326 + (TTTC)n Simple_repeat Simple_repeat 2 51 0 1967 134 40 0 chr20 269684 269982 -66398023 - AluSx SINE Alu 0 312 3 664 317 66 8 chr20 270106 270349 -66397656 - MIR SINE MIR 0 262 6 195 162 0 0 chr20 270546 270583 -66397422 + (CA)n Simple_repeat Simple_repeat 1 37 0 247 305 98 18 chr20 270624 270788 -66397217 + L2 LINE L2 1853 2029 -1285 368 141 16 0 chr20 270939 271003 -66397002 - AluJo SINE Alu -3 298 234 901 159 0 59 chr20 271003 271173 -66396832 - AluJo SINE Alu -152 160 1 741 237 133 37 chr20 271173 271631 -66396374 + MLT1G LTR MaLR 19 538 -4 976 236 167 25 chr20 271640 271958 -66396047 - MLT1A1 LTR MaLR -2 363 1 2326 97 0 3 chr20 272039 272350 -66395655 - AluSg SINE Alu 0 310 1 1235 275 154 9 chr20 272350 272798 -66395207 + MLT1K LTR MaLR 34 546 -42 300 70 0 0 chr20 273019 273062 -66394943 + (TC)n Simple_repeat Simple_repeat 1 43 0 2296 77 0 13 chr20 273248 273548 -66394457 + AluSc SINE Alu 1 296 -13 309 423 621 0 chr20 273663 273833 -66394172 - L1MC4a LINE L1 -302 5819 5795 2192 211 42 84 chr20 273833 274081 -66393924 - MLT1G LTR MaLR 0 590 333 1841 85 8 0 chr20 274081 274329 -66393676 - AluSx SINE Alu -62 250 1 2192 211 42 84 chr20 274329 274696 -66393309 - MLT1G LTR MaLR -257 333 1 309 423 621 0 chr20 274696 274758 -66393247 - L1MC4a LINE L1 -326 5795 5685 582 338 87 0 chr20 274758 275024 -66392981 + L2 LINE L2 2564 2852 -462 276 30 0 0 chr20 275066 275099 -66392906 + (CA)n Simple_repeat Simple_repeat 1 33 0 188 167 103 90 chr20 275099 275177 -66392828 + MIR SINE MIR 184 262 0 278 240 27 13 chr20 275188 275263 -66392742 - L2 LINE L2 -9 3304 3229 2068 134 0 6 chr20 275276 275590 -66392415 + AluJb SINE Alu 1 312 0 196 379 0 0 chr20 275720 275786 -66392219 - MIR SINE MIR -85 123 58 22 35 0 0 chr20 276487 276516 -66391489 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 277317 277338 -66390667 + GC_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr20 277918 277962 -66390043 + (TG)n Simple_repeat Simple_repeat 2 45 0 587 341 0 0 chr20 278635 278802 -66389203 - MIR SINE MIR -83 179 13 236 210 48 0 chr20 278826 278888 -66389117 - MIR SINE MIR -11 251 187 228 222 25 62 chr20 279358 279439 -66388566 - MLT1K LTR MaLR -1 587 510 2118 109 3 10 chr20 279501 279626 -66388379 + AluSx SINE Alu 11 135 -177 2106 105 0 20 chr20 279626 279932 -66388073 + AluSg SINE Alu 1 300 -10 2118 109 3 10 chr20 279932 280110 -66387895 + AluSx SINE Alu 135 312 0 1995 126 0 0 chr20 280400 280685 -66387320 + AluSq SINE Alu 21 305 -8 1860 159 10 0 chr20 280698 280994 -66387011 + AluJo SINE Alu 13 311 -1 709 228 95 4 chr20 281012 281253 -66386752 + L1M4 LINE L1 4363 4625 -1521 185 129 0 0 chr20 281258 281289 -66386716 + L2 LINE L2 3023 3053 -260 279 319 129 0 chr20 281420 281536 -66386469 - MLT1K LTR MaLR -290 298 168 273 204 86 32 chr20 281921 282014 -66385991 - L2 LINE L2 -16 3256 3159 619 250 42 118 chr20 282029 282361 -66385644 - L2 LINE L2 0 3272 2966 235 308 13 0 chr20 283355 283433 -66384572 + MIR3 SINE MIR 82 160 -48 214 294 98 10 chr20 283637 283739 -66384266 - MIR SINE MIR -62 146 36 364 282 114 0 chr20 284360 284433 -66383572 - MIR SINE MIR -20 242 179 2157 109 3 0 chr20 284433 284737 -66383268 - AluSx SINE Alu -5 307 3 364 282 114 0 chr20 284737 284794 -66383211 - MIR SINE MIR -83 179 97 2269 64 0 58 chr20 284802 285131 -66382874 - AluY SINE Alu -1 310 1 1871 135 22 16 chr20 285141 285453 -66382552 - L1PB2 LINE L1 0 6151 5838 2238 100 0 0 chr20 285494 285793 -66382212 + AluSx SINE Alu 1 299 -13 334 277 25 34 chr20 285963 286082 -66381923 - MIR SINE MIR 0 262 145 * 1486 248 109 53 chr20 286074 286863 -66381142 + L2 LINE L2 2240 3074 -239 2278 97 3 0 chr20 286867 287178 -66380827 + AluSp SINE Alu 1 312 -1 2133 121 0 0 chr20 287190 287488 -66380517 + AluSx SINE Alu 1 298 -14 280 240 146 12 chr20 287513 287688 -66380317 + L1ME LINE L1 5571 5783 -338 1237 122 148 97 chr20 287689 287967 -66380038 + AluJo SINE Alu 1 292 -20 2048 101 50 0 chr20 288000 288298 -66379707 - AluSp SINE Alu 0 313 1 1006 146 5 61 chr20 288301 288456 -66379549 + L1MD3 LINE L1 7077 7218 -777 728 181 0 8 chr20 288456 288583 -66379422 - FLAM_A SINE Alu -7 126 1 1006 146 5 61 chr20 288583 288640 -66379365 + L1MD3 LINE L1 7218 7277 -718 640 240 0 0 chr20 288641 288766 -66379239 + MLT1F1 LTR MaLR 1 125 -442 1501 176 95 0 chr20 288766 289062 -66378943 + L1MD3 LINE L1 7404 7727 -268 406 200 20 59 chr20 289046 289147 -66378858 + L1MD3 LINE L1 6260 6351 -8 * 2278 96 0 0 chr20 289150 289451 -66378554 + AluSx SINE Alu 1 301 -11 2180 84 7 10 chr20 289844 290141 -66377864 - AluSp SINE Alu -17 296 1 401 275 101 57 chr20 290307 290488 -66377517 + MIR SINE MIR 67 262 0 257 364 11 0 chr20 290536 290624 -66377381 - L2 LINE L2 -68 3204 3116 584 308 87 0 chr20 290701 290896 -66377109 - MIR SINE MIR -21 241 30 2179 104 19 10 chr20 291336 291645 -66376360 + AluSx SINE Alu 1 312 0 255 294 176 0 chr20 291645 291747 -66376258 - MIR3 SINE MIR -85 123 4 197 222 16 0 chr20 292306 292369 -66375636 + (TGAA)n Simple_repeat Simple_repeat 3 66 0 1645 149 34 0 chr20 292387 292683 -66375322 - AluJb SINE Alu 0 311 7 250 327 73 0 chr20 292693 292803 -66375202 - L2 LINE L2 0 3272 3155 227 269 0 0 chr20 292918 292970 -66375035 + (TG)n Simple_repeat Simple_repeat 1 52 0 275 263 111 0 chr20 293404 293503 -66374502 + MIR SINE MIR 81 190 -72 1048 252 87 47 chr20 293779 293912 -66374093 - L2 LINE L2 -1 3312 3186 2059 115 0 10 chr20 293912 294216 -66373789 + AluSx SINE Alu 1 301 -11 1048 252 87 47 chr20 294216 294506 -66373499 - L2 LINE L2 -127 3186 2872 592 304 40 9 chr20 295191 295228 -66372777 + L1MC4a LINE L1 5406 5440 -2368 2160 83 0 14 chr20 295228 295518 -66372487 - AluSq SINE Alu -4 309 24 592 304 40 9 chr20 295518 295707 -66372298 + L1MC4a LINE L1 5440 5639 -2169 588 82 0 0 chr20 295745 295844 -66372161 + AluSp/q SINE Alu 211 309 0 774 259 50 29 chr20 295844 296138 -66371867 + L1MC4a LINE L1 5628 5945 -297 236 63 32 79 chr20 296284 296347 -66371658 + (TATAA)n Simple_repeat Simple_repeat 4 63 0 2105 91 0 7 chr20 296362 296684 -66371321 + AluSp SINE Alu 3 322 0 220 329 0 14 chr20 296792 296865 -66371140 + MIR SINE MIR 42 113 -95 2714 247 146 37 chr20 297178 297317 -66370688 + L2 LINE L2 1693 1815 -1498 1989 130 3 0 chr20 297317 297601 -66370404 - AluJb SINE Alu -27 285 1 2714 247 146 37 chr20 297601 297709 -66370296 + L2 LINE L2 1815 1910 -1403 2284 97 0 3 chr20 297709 298017 -66369988 - AluSc SINE Alu -2 307 1 2714 247 146 37 chr20 298017 298670 -66369335 + L2 LINE L2 1910 2491 -822 763 197 0 29 chr20 298670 298807 -66369198 + AluJo/FLAM SINE Alu 1 133 -169 2247 95 3 3 chr20 298809 299114 -66368891 + AluSx SINE Alu 1 305 -7 2714 247 146 37 chr20 299114 299529 -66368476 + L2 LINE L2 2491 2859 -454 1835 162 0 3 chr20 299529 299831 -66368174 - AluJb SINE Alu -11 301 1 2714 247 146 37 chr20 299831 299958 -66368047 + L2 LINE L2 2859 3313 0 614 264 35 25 chr20 300134 300331 -66367674 - L2 LINE L2 -1 3312 3114 225 83 0 0 chr20 301556 301592 -66366413 + (GGAA)n Simple_repeat Simple_repeat 3 38 0 534 277 40 30 chr20 301924 301976 -66366029 + MIR SINE MIR 11 61 -201 2004 107 21 0 chr20 301976 302257 -66365748 + AluSx SINE Alu 1 287 -25 534 277 40 30 chr20 302257 302406 -66365599 + MIR SINE MIR 61 214 -48 306 220 0 77 chr20 302516 302607 -66365398 - MIR SINE MIR 0 262 179 1044 174 0 0 chr20 302632 302799 -66365206 + AluJb SINE Alu 137 303 -9 192 77 0 0 chr20 302800 302826 -66365179 + (GGAA)n Simple_repeat Simple_repeat 1 26 0 324 316 86 7 chr20 302851 302990 -66365015 - MIR SINE MIR -85 177 28 * 396 279 105 23 chr20 302936 303108 -66364897 + MIR SINE MIR 11 196 -66 955 270 15 68 chr20 303412 303451 -66364554 + MER113 DNA MER1_type? 73 113 -408 275 48 0 24 chr20 303451 303493 -66364512 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1913 147 0 0 chr20 303493 303772 -66364233 - AluSx SINE Alu -33 279 1 955 270 15 68 chr20 303772 304015 -66363990 + MER113 DNA MER1_type? 112 366 -155 2054 88 36 20 chr20 304015 304135 -66363870 + AluY SINE Alu 1 118 -193 186 43 0 0 chr20 304135 304158 -66363847 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2054 88 36 20 chr20 304158 304343 -66363662 + AluY SINE Alu 118 311 0 955 270 15 68 chr20 304343 304362 -66363643 + MER113 DNA MER1_type? 366 384 -137 2233 98 3 0 chr20 304362 304668 -66363337 + AluY SINE Alu 1 307 -4 955 270 15 68 chr20 304668 304837 -66363168 + MER113 DNA MER1_type? 384 521 0 301 284 17 60 chr20 304846 304962 -66363043 - MIR3 SINE MIR -48 160 50 1906 132 0 16 chr20 305175 305510 -66362495 + AluSx SINE Alu 1 312 0 620 203 23 0 chr20 305680 305808 -66362197 - MIR SINE MIR -44 218 88 250 280 40 0 chr20 305862 305937 -66362068 - MIR SINE MIR -68 194 117 2310 147 45 33 chr20 306072 306494 -66361511 - MSTC LTR MaLR -1 427 1 385 163 0 35 chr20 306494 306580 -66361425 + Charlie5 DNA MER1_type 18 100 -2512 2294 119 0 0 chr20 306581 306884 -66361121 - AluSg SINE Alu -7 303 1 194 252 92 130 chr20 307060 307108 -66360897 + MIR SINE MIR 24 72 -190 2337 95 7 3 chr20 307108 307412 -66360593 - AluSq SINE Alu -8 305 1 194 252 92 130 chr20 307412 307494 -66360511 + MIR SINE MIR 72 149 -113 308 323 31 0 chr20 307711 307807 -66360198 + L2 LINE L2 3136 3234 -38 1958 106 25 21 chr20 308123 308437 -66359568 - AluY SINE Alu 0 315 1 1672 179 17 3 chr20 308464 308754 -66359251 - AluJo SINE Alu -18 294 1 2433 86 10 0 chr20 308821 309122 -66358883 + AluSp SINE Alu 1 304 -9 778 308 43 0 chr20 309248 309482 -66358523 - MIR SINE MIR -17 245 2 222 297 79 23 chr20 309748 309838 -66358167 - MIR SINE MIR -60 148 100 2711 30 3 0 chr20 309838 310142 -66357863 + AluY SINE Alu 1 305 -6 222 297 79 23 chr20 310142 310179 -66357826 - MIR SINE MIR -108 100 67 21 0 0 0 chr20 310252 310273 -66357732 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 310562 310583 -66357422 + GC_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr20 310631 310668 -66357337 + GC_rich Low_complexity Low_complexity 1 37 0 267 31 0 0 chr20 311533 311565 -66356440 + (TG)n Simple_repeat Simple_repeat 1 32 0 521 284 59 31 chr20 312023 312245 -66355760 - MIR SINE MIR -2 260 33 656 272 75 54 chr20 312597 312873 -66355132 - L1MC4a LINE L1 -1924 5884 5597 1517 196 41 0 chr20 312873 313173 -66354832 - AluJo SINE Alu 0 311 1 656 272 75 54 chr20 313173 313244 -66354761 - L1MC4a LINE L1 -2211 5597 5529 220 306 131 52 chr20 313367 313721 -66354284 + L2 LINE L2 2395 2720 -594 1203 245 122 26 chr20 313721 313790 -66354215 - MLT1J LTR MaLR 0 511 450 2445 98 0 0 chr20 313790 314095 -66353910 - AluSc SINE Alu -4 305 1 1203 245 122 26 chr20 314095 314491 -66353514 - MLT1J LTR MaLR -61 450 1 220 306 131 52 chr20 314491 314537 -66353468 + L2 LINE L2 2720 2761 -553 2444 97 0 0 chr20 314537 314846 -66353159 - AluSp SINE Alu -4 309 1 220 306 131 52 chr20 314846 314941 -66353064 + L2 LINE L2 2761 2930 -384 735 181 103 0 chr20 314961 315116 -66352889 + MER5A DNA MER1_type 19 189 0 316 314 48 8 chr20 315141 315265 -66352740 + L2 LINE L2 2985 3113 -159 1876 148 20 33 chr20 315294 315597 -66352408 - AluJb SINE Alu -13 299 1 1281 102 0 0 chr20 315852 316009 -66351996 - AluSg/x SINE Alu -22 288 132 2047 103 4 0 chr20 316009 316272 -66351733 - AluSg SINE Alu -15 295 32 1276 111 0 12 chr20 316312 316484 -66351521 - AluSg SINE Alu -140 170 1 1312 187 21 17 chr20 316527 316762 -66351243 + AluJo SINE Alu 1 236 -76 1066 268 36 50 chr20 316819 316880 -66351125 - L1MC4a LINE L1 -1838 5970 5910 549 163 106 41 chr20 316880 317003 -66351002 + FLAM_A SINE Alu 1 131 -2 1066 268 36 50 chr20 317003 317385 -66350620 - L1MC4a LINE L1 -1898 5910 5533 343 317 42 6 chr20 317996 318163 -66349842 - L2 LINE L2 -264 3008 2836 290 299 0 21 chr20 318277 318374 -66349631 - MIR3 SINE MIR -33 175 81 591 291 27 18 chr20 318536 318756 -66349249 - MIR SINE MIR -19 243 22 407 255 161 0 chr20 319329 319478 -66348527 - L2 LINE L2 0 3313 3141 2513 84 0 3 chr20 319478 319788 -66348217 + AluSq SINE Alu 1 309 -4 482 270 172 47 chr20 320122 320153 -66347852 + MIR SINE MIR 5 31 -231 2386 108 0 0 chr20 320153 320458 -66347547 + AluSx SINE Alu 1 305 -7 482 270 172 47 chr20 320458 320641 -66347364 + MIR SINE MIR 31 246 -16 2428 95 0 0 chr20 321173 321469 -66346536 + AluSx SINE Alu 1 296 -16 748 163 81 12 chr20 321582 321742 -66346263 - MIR SINE MIR -74 188 18 194 256 125 0 chr20 321778 321852 -66346153 + MIR3 SINE MIR 73 156 -52 2216 123 0 3 chr20 321991 322291 -66345714 - AluSx SINE Alu -13 299 1 2600 185 91 40 chr20 322471 322771 -66345234 - L1MC4a LINE L1 0 7808 7525 1949 133 54 0 chr20 322771 323050 -66344955 - AluJo SINE Alu -18 294 1 2600 185 91 40 chr20 323050 323450 -66344555 - L1MC4a LINE L1 -283 7525 7072 2271 101 47 0 chr20 323452 323748 -66344257 - AluSg SINE Alu 0 310 1 2047 152 3 7 chr20 323946 324249 -66343756 + AluJo SINE Alu 11 312 0 484 248 36 15 chr20 324257 324394 -66343611 + MIR3 SINE MIR 6 145 -63 2178 117 3 7 chr20 324596 324894 -66343111 - AluJb SINE Alu -15 297 1 256 246 58 0 chr20 325421 325490 -66342515 + MIR SINE MIR 72 144 -118 399 228 22 11 chr20 326304 326396 -66341609 - L2 LINE L2 -24 3289 3197 316 216 15 121 chr20 327213 327354 -66340651 - MLT1L LTR MaLR -48 567 336 993 201 56 26 chr20 327442 327676 -66340329 + MIR SINE MIR 12 252 -10 2348 66 3 30 chr20 327682 327984 -66340021 + AluSg SINE Alu 1 294 -16 366 236 22 0 chr20 328017 328106 -66339899 - MLT1L LTR MaLR -344 271 181 397 187 19 192 chr20 328258 328404 -66339601 + MLT1H LTR MaLR 373 472 -77 2379 81 0 28 chr20 328404 328724 -66339281 - AluSx SINE Alu -1 311 1 397 187 19 192 chr20 328724 328791 -66339214 + MLT1H LTR MaLR 472 549 0 333 333 56 0 chr20 329032 329140 -66338865 - MIR SINE MIR -69 193 80 2373 91 0 0 chr20 329240 329537 -66338468 + AluSx SINE Alu 1 297 -15 303 266 245 29 chr20 329768 329907 -66338098 - L2 LINE L2 0 3272 3104 292 197 167 0 chr20 329973 330039 -66337966 + MLT1J2 LTR MaLR 67 143 -307 339 235 136 15 chr20 330114 330246 -66337759 + MLT1J2 LTR MaLR 299 446 -4 447 272 304 10 chr20 330334 330647 -66337358 - MLT1H LTR MaLR -72 477 73 3164 159 23 14 chr20 330674 330840 -66337165 - MER44D DNA MER2_type -1882 705 542 2596 75 0 0 chr20 330840 331148 -66336857 + AluSc SINE Alu 1 308 -1 3164 159 23 14 chr20 331148 331597 -66336408 - MER44D DNA MER2_type -2045 542 8 805 93 0 0 chr20 331835 331942 -66336063 + AluSp/q SINE Alu 207 313 0 1602 143 42 23 chr20 331948 332213 -66335792 - AluJo SINE Alu -31 281 12 439 289 102 0 chr20 332231 332397 -66335608 + MER5A DNA MER1_type 7 189 0 606 230 184 0 chr20 332613 332809 -66335196 + L2 LINE L2 3082 3313 0 214 328 0 0 chr20 332868 332929 -66335076 - MIR SINE MIR -19 243 183 2437 206 23 15 chr20 332938 333461 -66334544 + MLT1F LTR MaLR 16 542 0 503 268 33 13 chr20 333462 333615 -66334390 - MIR SINE MIR -78 184 29 609 290 65 81 chr20 333776 333876 -66334129 + L1MEd LINE L1 800 900 -5305 2193 101 0 10 chr20 333876 334174 -66333831 + AluSq SINE Alu 1 295 -18 609 290 65 81 chr20 334174 334307 -66333698 + L1MEd LINE L1 900 1034 -5171 2277 89 0 7 chr20 334307 334589 -66333416 + AluSq SINE Alu 1 280 -33 288 0 0 0 chr20 334589 334621 -66333384 + (CA)n Simple_repeat Simple_repeat 1 32 0 609 290 65 81 chr20 334621 334695 -66333310 + L1MEd LINE L1 1032 1104 -5101 349 223 210 64 chr20 334692 334849 -66333156 + L1MEd LINE L1 1333 1512 -4884 * 292 147 35 198 chr20 334872 334988 -66333017 + L1MB7 LINE L1 5814 5910 -264 469 92 0 0 chr20 334998 335063 -66332942 - AluJb SINE Alu -20 292 228 1199 119 0 0 chr20 335063 335222 -66332783 - AluJb SINE Alu -149 163 5 1050 178 40 36 chr20 335227 335365 -66332640 + L1MB7 LINE L1 5909 6045 -139 2163 148 0 0 chr20 335365 335676 -66332329 - AluSx SINE Alu -1 311 1 1050 178 40 36 chr20 335676 335812 -66332193 + L1MB7 LINE L1 6045 6184 0 1629 127 107 8 chr20 335913 336166 -66331839 + AluJo SINE Alu 29 306 -6 235 186 0 0 chr20 336170 336213 -66331792 + MER5B DNA MER1_type 136 178 0 983 285 127 25 chr20 336271 337012 -66330993 - L2 LINE L2 0 3313 2476 188 276 35 0 chr20 337150 337208 -66330797 + MIR SINE MIR 81 140 -68 405 50 30 69 chr20 337367 337468 -66330537 + (CCCCG)n Simple_repeat Simple_repeat 2 98 0 749 278 200 10 chr20 338535 339042 -66328963 + L2 LINE L2 2698 3313 0 249 326 0 11 chr20 339109 339198 -66328807 - L2 LINE L2 -213 3059 2972 463 303 58 0 chr20 339514 339669 -66328336 + MIR SINE MIR 19 182 -80 569 293 156 50 chr20 339721 340080 -66327925 - MLT1J LTR MaLR -88 423 27 181 262 131 0 chr20 340096 340157 -66327848 + MIR SINE MIR 179 247 -15 4422 162 44 39 chr20 340268 340631 -66327374 - L1MB7 LINE L1 0 6184 5824 1569 191 23 43 chr20 340631 340785 -66327220 - AluJo SINE Alu -19 293 146 2462 64 0 3 chr20 340785 341081 -66326924 - AluY SINE Alu -16 295 1 1569 191 23 43 chr20 341081 341225 -66326780 - AluJo SINE Alu -166 146 1 4422 162 44 39 chr20 341225 341734 -66326271 - L1MB7 LINE L1 -360 5824 5319 2266 100 10 3 chr20 341734 342033 -66325972 - AluSx SINE Alu -11 301 1 4422 162 44 39 chr20 342033 342835 -66325170 - L1MB7 LINE L1 -865 5319 4515 347 200 111 22 chr20 342838 342928 -66325077 - HAL1b LINE L1 -442 906 809 201 250 0 0 chr20 343073 343113 -66324892 + MER5A DNA MER1_type 70 109 -80 1353 209 62 4 chr20 343574 343832 -66324173 + AluJb SINE Alu 30 302 -10 342 214 125 0 chr20 344315 344427 -66323578 - HAL1 LINE L1 -838 1669 1544 647 245 122 39 chr20 344427 344508 -66323497 - L1MC5 LINE L1 -176 7785 7712 1791 174 27 3 chr20 344508 344806 -66323199 + AluJo SINE Alu 1 305 -7 647 245 122 39 chr20 344806 345090 -66322915 - L1MC5 LINE L1 -249 7712 7376 1905 176 65 17 chr20 345090 345493 -66322512 - MSTB LTR MaLR 0 426 5 647 245 122 39 chr20 345493 345562 -66322443 - L1MC5 LINE L1 -585 7376 7314 2258 68 0 18 chr20 345569 345848 -66322157 - AluY SINE Alu -11 300 27 372 329 59 59 chr20 345856 346075 -66321930 - HAL1 LINE L1 -1428 1079 861 1638 170 40 7 chr20 346132 346409 -66321596 + AluJb SINE Alu 1 286 -26 663 244 51 15 chr20 346429 346626 -66321379 + MIR SINE MIR 56 259 -3 206 307 123 9 chr20 346634 346748 -66321257 - L2 LINE L2 -448 2866 2740 252 0 0 0 chr20 346810 346838 -66321167 + (TG)n Simple_repeat Simple_repeat 1 28 0 230 246 0 29 chr20 347071 347140 -66320865 + CT-rich Low_complexity Low_complexity 1 67 0 288 189 62 37 chr20 347542 347654 -66320351 + MIR SINE MIR 43 156 -78 1516 183 210 44 chr20 347679 347786 -66320219 - L1MC4 LINE L1 0 8042 7954 2686 37 0 0 chr20 347786 348082 -66319923 - AluY SINE Alu -15 296 1 1516 183 210 44 chr20 348082 348516 -66319489 - L1MC4 LINE L1 -88 7954 7411 267 55 0 82 chr20 350085 350158 -66317847 + (CCCCCA)n Simple_repeat Simple_repeat 6 72 0 303 326 42 0 chr20 350536 350680 -66317325 - MIR SINE MIR -67 195 46 248 219 286 28 chr20 351052 351339 -66316666 - L2 LINE L2 -376 2938 2578 616 162 0 0 chr20 351729 351834 -66316171 - FLAM_C SINE Alu -1 142 38 289 313 114 20 chr20 351930 351962 -66316043 + MIR SINE MIR 3 31 -231 1697 139 56 63 chr20 351962 352264 -66315741 + AluJb SINE Alu 1 300 -12 289 313 114 20 chr20 352264 352432 -66315573 + MIR SINE MIR 31 222 -40 2339 81 3 0 chr20 352434 352718 -66315287 + AluSp SINE Alu 3 287 -26 321 221 139 0 chr20 352764 352850 -66315155 - MLT1H LTR MaLR 0 595 498 1219 142 25 0 chr20 352952 353156 -66314849 - MER2 DNA MER2_type -135 210 2 494 249 93 57 chr20 353158 353492 -66314513 - MLT1H LTR MaLR -96 453 108 301 244 56 0 chr20 353625 353715 -66314290 + MIR3 SINE MIR 66 160 -48 2384 102 0 0 chr20 354422 354725 -66313280 - AluSx SINE Alu -9 303 1 327 263 38 2 chr20 354747 354859 -66313146 - L1ME2 LINE L1 -5 6161 6045 2277 123 0 0 chr20 355038 355339 -66312666 - AluSg SINE Alu -9 301 1 335 315 50 39 chr20 355353 355488 -66312517 - L1ME LINE L1 -458 5663 5524 3175 116 41 0 chr20 355488 356005 -66312000 - L1MA2 LINE L1 0 6304 5767 335 315 50 39 chr20 356005 356050 -66311955 - L1ME LINE L1 -597 5524 5481 845 78 39 0 chr20 356056 356184 -66311821 - L1MB3 LINE L1 0 6183 6051 1697 174 3 43 chr20 356231 356553 -66311452 - AluJo SINE Alu -3 309 1 210 342 26 13 chr20 357068 357220 -66310785 + (CCCCAG)n Simple_repeat Simple_repeat 5 158 0 329 203 0 0 chr20 357629 357688 -66310317 + AluSp SINE Alu 131 189 -114 227 113 170 19 chr20 357706 357759 -66310246 + MIR SINE MIR 83 143 -65 1269 201 108 25 chr20 358567 358641 -66309364 + MER58B DNA MER1_type 2 68 -2352 2456 78 3 0 chr20 358641 358935 -66309070 - AluSp SINE Alu -13 300 6 1269 201 108 25 chr20 358935 359174 -66308831 + MER58B DNA MER1_type 68 341 0 533 290 80 18 chr20 359177 359401 -66308604 + MIR SINE MIR 5 242 -20 432 250 74 69 chr20 361450 361666 -66306339 + Charlie8 DNA MER1_type 49 265 -2152 349 244 76 130 chr20 363067 363382 -66304623 - MER21B LTR ERV1 -158 705 408 2534 63 7 0 chr20 363416 363716 -66304289 - AluSq SINE Alu -11 302 1 395 222 62 151 chr20 363777 364002 -66304003 - MER21B LTR ERV1 -658 205 1 2401 176 147 98 chr20 364605 365476 -66302529 - MER21A LTR ERV1 -17 914 1 185 282 90 0 chr20 365513 365591 -66302414 - MIR SINE MIR -122 140 56 2371 106 0 3 chr20 366245 366556 -66301449 + AluSx SINE Alu 1 310 -2 431 161 43 11 chr20 369394 369487 -66298518 - MER103 DNA DNA -57 109 14 2211 103 10 3 chr20 370224 370516 -66297489 + AluSp SINE Alu 2 295 -18 21 0 0 0 chr20 370531 370552 -66297453 + AT_rich Low_complexity Low_complexity 1 21 0 1422 236 103 84 chr20 371634 372230 -66295775 + L1MC4 LINE L1 7323 7937 -105 2332 83 0 10 chr20 372230 372532 -66295473 + AluY SINE Alu 1 299 -12 1422 236 103 84 chr20 372532 372641 -66295364 + L1MC4 LINE L1 7937 8042 0 2180 98 7 24 chr20 373266 373561 -66294444 + AluSq SINE Alu 11 300 -13 182 156 22 0 chr20 373965 374010 -66293995 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 2213 114 14 0 chr20 375763 376053 -66291952 - AluSx SINE Alu -16 296 3 1355 186 133 0 chr20 376083 376346 -66291659 - AluJo SINE Alu -14 298 1 2246 104 0 41 chr20 376358 376674 -66291331 - AluSg1 SINE Alu -6 303 1 2346 115 0 6 chr20 376792 377104 -66290901 + AluSx SINE Alu 3 312 0 2406 94 0 0 chr20 377823 378121 -66289884 + AluSg SINE Alu 1 298 -12 674 193 0 0 chr20 378121 378235 -66289770 - FLAM_A SINE Alu -18 115 2 2169 92 13 23 chr20 378256 378559 -66289446 - AluSg SINE Alu -10 300 1 1055 63 0 0 chr20 378568 378694 -66289311 - AluSc SINE Alu -12 297 172 180 0 0 0 chr20 378700 378720 -66289285 + (A)n Simple_repeat Simple_repeat 1 20 0 2391 101 0 3 chr20 378729 379037 -66288968 + AluSg SINE Alu 1 307 -3 342 291 0 12 chr20 379045 379131 -66288874 + MIR SINE MIR 38 122 -86 2200 106 17 0 chr20 379568 379860 -66288145 - AluSx SINE Alu -15 297 1 626 82 41 20 chr20 380077 380175 -66287830 + HY3 scRNA scRNA 1 100 -1 2215 99 0 10 chr20 380677 380989 -66287016 + AluSx SINE Alu 1 309 0 437 189 0 14 chr20 381149 381223 -66286782 - AluJb SINE Alu -28 284 212 2187 112 0 7 chr20 381441 381745 -66286260 + AluSg SINE Alu 1 302 -8 1595 176 49 4 chr20 381761 382028 -66285977 + AluJo SINE Alu 1 279 -33 2326 89 13 22 chr20 382282 382598 -66285407 + AluSp SINE Alu 1 313 0 2371 81 0 26 chr20 382605 382913 -66285092 + AluSp SINE Alu 1 300 -13 895 88 7 73 chr20 382929 382955 -66285050 + AluSq/x SINE Alu 10 36 -276 2402 97 0 19 chr20 382955 383264 -66284741 - AluSg SINE Alu -7 303 1 895 88 7 73 chr20 383264 383373 -66284632 + AluSq/x SINE Alu 36 136 -176 2280 92 20 10 chr20 383373 383678 -66284327 + AluY SINE Alu 1 308 -3 1908 133 14 14 chr20 384065 384386 -66283619 - AluSx SINE Alu 0 321 1 551 213 0 71 chr20 384590 384731 -66283274 - MER94 DNA DNA 0 134 4 2183 122 0 0 chr20 384767 385062 -66282943 + AluSx SINE Alu 18 312 0 2479 90 3 0 chr20 385065 385375 -66282630 + AluSq SINE Alu 1 311 -2 1245 182 146 16 chr20 385421 385674 -66282331 + AluSx SINE Alu 12 297 -15 198 103 0 0 chr20 385752 385781 -66282224 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 325 310 138 85 chr20 385796 385972 -66282033 - L2 LINE L2 -1 3271 3106 2338 101 0 7 chr20 385972 386280 -66281725 - AluSq SINE Alu -7 306 1 325 310 138 85 chr20 386280 386339 -66281666 - L2 LINE L2 -166 3106 3052 2509 88 3 0 chr20 386339 386647 -66281358 - AluSp SINE Alu -4 309 1 1588 165 91 11 chr20 386648 386933 -66281072 - AluJo SINE Alu -4 308 1 325 310 138 85 chr20 386933 387094 -66280911 - L2 LINE L2 -219 3053 2851 1907 137 23 23 chr20 387726 388025 -66279980 - AluJb SINE Alu -13 299 1 225 0 0 0 chr20 389051 389076 -66278929 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 416 209 9 45 chr20 389076 389179 -66278826 - MER31A LTR ERV1 -32 453 353 920 162 0 7 chr20 389716 389864 -66278141 + FRAM SINE Alu 20 166 -10 24 0 0 0 chr20 390468 390492 -66277513 + AT_rich Low_complexity Low_complexity 1 24 0 1714 166 17 7 chr20 390772 391073 -66276932 - AluJo SINE Alu -8 304 1 697 206 144 0 chr20 391116 391296 -66276709 + L1MB7 LINE L1 5955 6160 -24 206 271 7 46 chr20 391620 391771 -66276234 + C-rich Low_complexity Low_complexity 3 147 0 21 0 0 0 chr20 391817 391838 -66276167 + GC_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr20 391936 391984 -66276021 + GC_rich Low_complexity Low_complexity 1 48 0 255 252 164 101 chr20 392092 392251 -66275754 + MIR SINE MIR 83 251 -11 348 239 65 0 chr20 392355 392447 -66275558 - MER91C DNA MER1_type -6 134 37 187 309 104 70 chr20 392476 392706 -66275299 + L2 LINE L2 718 955 -2359 627 53 0 0 chr20 392708 392784 -66275221 - Alu SINE Alu -232 77 2 1588 155 87 18 chr20 393109 393386 -66274619 - AluJo SINE Alu -11 301 6 2204 121 0 0 chr20 393514 393811 -66274194 + AluSx SINE Alu 14 310 -2 338 257 83 0 chr20 394047 394156 -66273849 - L1MCc LINE L1 -4365 2757 2640 * 814 218 33 37 chr20 394153 394426 -66273579 - L1ME1 LINE L1 -165 6001 5764 1293 198 72 0 chr20 394520 394798 -66273207 + MER58B DNA MER1_type 21 318 -23 2295 66 17 10 chr20 394835 395123 -66272882 - AluSp SINE Alu -23 290 1 2307 108 10 0 chr20 395149 395454 -66272551 + AluSx SINE Alu 1 308 -4 581 163 24 41 chr20 395470 395593 -66272412 - FLAM_C SINE Alu -22 121 1 1323 253 152 24 chr20 395619 396035 -66271970 - L1MCc LINE L1 -4490 2451 2090 372 94 0 0 chr20 396035 396088 -66271917 + (TA)n Simple_repeat Simple_repeat 1 53 0 1323 253 152 24 chr20 396088 396432 -66271573 - L1MCc LINE L1 -4851 2090 1791 2504 60 13 0 chr20 396432 396731 -66271274 - AluY SINE Alu -8 303 1 1323 253 152 24 chr20 396731 397085 -66270920 - L1MCc LINE L1 -5150 1791 1188 1148 169 6 6 chr20 397090 397273 -66270732 + AluJo SINE Alu 1 183 -129 2248 177 100 15 chr20 397273 397742 -66270263 - LTR22 LTR ERVK 0 509 1 21538 84 21 2 chr20 397742 400858 -66267147 - HERVK22 LTR ERVK 0 6837 2332 1346 119 25 0 chr20 400856 401058 -66266947 - HERVK22 LTR ERVK -5932 905 699 * 4951 99 42 33 chr20 401052 401846 -66266159 - HERVK22 LTR ERVK -6036 801 1 2210 184 98 11 chr20 401846 402314 -66265691 - LTR22 LTR ERVK 0 509 1 926 121 0 0 chr20 402315 402439 -66265566 + AluJo SINE Alu 179 302 -10 738 249 99 55 chr20 402439 402801 -66265204 - L1MCc LINE L1 -5230 1193 816 365 266 46 87 chr20 403427 403466 -66264539 - L2 LINE L2 -562 2752 2713 1223 194 90 21 chr20 403466 403745 -66264260 - AluJo SINE Alu -2 300 3 365 266 46 87 chr20 403745 403946 -66264059 - L2 LINE L2 -601 2713 2522 677 235 78 53 chr20 404023 404342 -66263663 - HAL1 LINE L1 -168 2339 2013 2195 123 0 7 chr20 404588 404889 -66263116 + AluSx SINE Alu 1 299 -13 225 268 45 45 chr20 405032 405144 -66262861 + MLT1H LTR MaLR 50 161 -388 2081 138 3 3 chr20 405671 405969 -66262036 - AluSx SINE Alu -13 299 2 1931 172 7 0 chr20 405979 406282 -66261723 - AluJb SINE Alu -7 305 1 2023 128 7 0 chr20 406312 406600 -66261405 - AluJo SINE Alu -22 290 1 1139 183 26 30 chr20 406620 406850 -66261155 - AluJb SINE Alu -26 286 58 1342 55 31 0 chr20 407121 407284 -66260721 + AluSp SINE Alu 1 168 -145 253 0 54 0 chr20 407295 407332 -66260673 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 234 206 73 39 chr20 407506 407582 -66260423 + L2 LINE L2 3175 3263 -9 1735 156 30 20 chr20 408058 408359 -66259646 + AluJb SINE Alu 1 304 -8 344 217 96 70 chr20 408541 408656 -66259349 - MER91B DNA MER1_type -61 129 12 197 219 276 9 chr20 408668 408773 -66259232 - MIR SINE MIR -6 256 124 1060 192 103 5 chr20 409193 409407 -66258598 + MER46A DNA MER2_type 1 235 -1 306 67 0 0 chr20 409646 409691 -66258314 + (TG)n Simple_repeat Simple_repeat 2 46 0 27 29 0 0 chr20 410522 410556 -66257449 + AT_rich Low_complexity Low_complexity 1 34 0 270 116 0 0 chr20 412876 412919 -66255086 + (TTCC)n Simple_repeat Simple_repeat 1 43 0 308 246 76 94 chr20 413612 413783 -66254222 - MIR SINE MIR -56 206 39 797 144 106 0 chr20 413807 413939 -66254066 + MER3 DNA MER1_type 63 208 -1 279 0 0 0 chr20 414106 414137 -66253868 + (TG)n Simple_repeat Simple_repeat 2 32 0 2336 103 3 0 chr20 414196 414507 -66253498 + AluSx SINE Alu 1 312 0 252 0 0 0 chr20 414521 414549 -66253456 + (TA)n Simple_repeat Simple_repeat 2 29 0 2067 107 14 3 chr20 414605 414894 -66253111 - AluSx SINE Alu -20 292 1 583 258 125 33 chr20 414894 415134 -66252871 - L1MC4a LINE L1 -1915 5893 5632 234 249 186 27 chr20 416665 416788 -66251217 - MIR SINE MIR -77 131 45 1210 174 144 8 chr20 417452 417716 -66250289 - AluJo SINE Alu -12 300 1 317 337 53 80 chr20 418392 418656 -66249349 + L2 LINE L2 2981 3237 -35 36 0 0 0 chr20 419348 419384 -66248621 + AT_rich Low_complexity Low_complexity 1 36 0 2196 110 10 7 chr20 419429 419738 -66248267 - AluSg SINE Alu 0 310 1 258 125 0 0 chr20 419740 419788 -66248217 + (T)n Simple_repeat Simple_repeat 1 48 0 2066 117 20 7 chr20 419816 420115 -66247890 - AluSg1 SINE Alu -6 303 1 925 132 112 20 chr20 420116 420268 -66247737 - FRAM SINE Alu -14 162 1 319 297 108 51 chr20 420366 420561 -66247444 - L1ME LINE L1 -317 5804 5599 1880 155 3 17 chr20 420800 421097 -66246908 + AluJo SINE Alu 5 297 -15 1933 75 8 11 chr20 421097 421362 -66246643 + AluY SINE Alu 44 308 -3 223 319 77 47 chr20 421798 421967 -66246038 + L2 LINE L2 2648 2821 -493 360 310 47 31 chr20 422185 422314 -66245691 + L2 LINE L2 3182 3312 -1 949 248 89 23 chr20 422492 422795 -66245210 + L2 LINE L2 2348 2670 -644 46 45 0 0 chr20 422800 422867 -66245138 + AT_rich Low_complexity Low_complexity 1 67 0 3181 182 128 57 chr20 422905 423436 -66244569 - L1MD2 LINE L1 -32 6327 5716 2320 81 17 7 chr20 423436 423734 -66244271 - AluSg SINE Alu -9 301 1 3181 182 128 57 chr20 423734 424025 -66243980 - L1MD2 LINE L1 -643 5716 5447 825 300 149 16 chr20 424028 424567 -66243438 + L2 LINE L2 2697 3313 0 221 269 43 85 chr20 424750 424891 -66243114 - MIR SINE MIR -72 190 56 239 316 13 0 chr20 424997 425073 -66242932 - L2 LINE L2 -3 3269 3193 1261 193 52 0 chr20 425613 425826 -66242179 + MER58A DNA MER1_type 1 224 0 1445 163 58 34 chr20 426563 426858 -66241147 - AluJo SINE Alu -8 304 3 784 116 0 27 chr20 426873 426985 -66241020 - FLAM_C SINE Alu -18 125 17 1225 112 0 6 chr20 427747 427916 -66240089 - FRAM SINE Alu -8 168 1 24 0 0 0 chr20 429370 429394 -66238611 + AT_rich Low_complexity Low_complexity 1 24 0 237 306 65 28 chr20 429443 429551 -66238454 + L2 LINE L2 3156 3267 -5 527 295 84 0 chr20 429811 429977 -66238028 + MIR SINE MIR 16 195 -67 2286 52 4 0 chr20 430046 430315 -66237690 - AluY SINE Alu -8 303 34 2355 93 0 0 chr20 430481 430772 -66237233 - AluSg SINE Alu -17 293 3 1175 159 142 21 chr20 430809 431098 -66236907 - MER33 DNA MER1_type 0 324 1 250 338 102 13 chr20 431191 431348 -66236657 - MER5A DNA MER1_type -2 187 17 868 204 0 6 chr20 432561 432723 -66235282 - FRAM SINE Alu -18 158 1 2208 211 39 66 chr20 432874 433307 -66234698 + MER119 DNA MER1_type 34 450 -133 2505 71 0 3 chr20 433307 433618 -66234387 + AluSx SINE Alu 1 310 -2 2208 211 39 66 chr20 433618 433748 -66234257 + MER119 DNA MER1_type 450 582 -1 856 267 44 4 chr20 433876 434101 -66233904 + Charlie8 DNA MER1_type 45 278 -2139 327 275 55 9 chr20 434266 434375 -66233630 + MIR SINE MIR 32 145 -63 2476 61 0 10 chr20 434763 435073 -66232932 - AluY SINE Alu -4 307 1 22 0 0 0 chr20 435078 435100 -66232905 + AT_rich Low_complexity Low_complexity 1 22 0 2628 36 0 7 chr20 435281 435587 -66232418 - AluY SINE Alu -7 304 1 957 144 0 0 chr20 436521 436667 -66231338 + AluSg/x SINE Alu 129 274 -36 1021 130 204 133 chr20 437283 437606 -66230399 - MER7A DNA MER2_type -2 344 1 1835 174 0 3 chr20 439001 439288 -66228717 - AluJb SINE Alu -26 286 1 368 222 139 141 chr20 439288 439582 -66228423 + L1MC4 LINE L1 7478 7771 -271 2444 69 3 10 chr20 439582 439886 -66228119 - AluSp SINE Alu -11 302 1 368 222 139 141 chr20 439886 440112 -66227893 + L1MC4 LINE L1 7771 7999 -43 1734 165 9 37 chr20 440112 440433 -66227572 - AluJb SINE Alu 0 312 1 3719 154 29 50 chr20 440444 440485 -66227520 - L1MB3 LINE L1 0 6183 6143 1651 157 61 7 chr20 440485 440765 -66227240 + AluJb SINE Alu 1 295 -17 3719 154 29 50 chr20 440765 441115 -66226890 - L1MB3 LINE L1 -40 6143 5811 252 0 0 0 chr20 441115 441143 -66226862 + (CA)n Simple_repeat Simple_repeat 2 29 0 3719 154 29 50 chr20 441143 441472 -66226533 - L1MB3 LINE L1 -372 5811 5477 628 88 22 11 chr20 441477 441568 -66226437 - FLAM_C SINE Alu -19 124 33 1070 157 12 23 chr20 441589 441829 -66226176 - L1P3 LINE L1 -632 5522 5280 1632 173 48 0 chr20 443486 443787 -66224218 + AluJb SINE Alu 1 314 0 1790 151 0 31 chr20 443862 444153 -66223852 - AluJb SINE Alu -30 282 1 198 311 49 0 chr20 444317 444378 -66223627 - L2 LINE L2 -25 3288 3225 486 269 253 23 chr20 444393 444828 -66223177 - L2 LINE L2 -516 2798 2264 347 304 119 6 chr20 444821 444989 -66223016 - MIR SINE MIR -48 214 28 * 227 369 39 39 chr20 445068 445198 -66222807 + L2 LINE L2 3143 3272 0 262 208 0 0 chr20 446750 446798 -66221207 - L2 LINE L2 -6 3266 3219 224 91 0 0 chr20 446962 446995 -66221010 - L2 LINE L2 -2 3311 3279 840 186 0 0 chr20 447412 447541 -66220464 - FRAM SINE Alu -47 129 1 233 290 110 10 chr20 447843 447943 -66220062 + L1ME1 LINE L1 647 756 -5449 2418 75 0 28 chr20 447947 448266 -66219739 - AluY SINE Alu -1 310 1 2167 128 0 7 chr20 448345 448649 -66219356 - AluSx SINE Alu -10 302 1 521 284 118 34 chr20 448681 448844 -66219161 + L1ME1 LINE L1 1268 1416 -4980 773 214 0 0 chr20 448844 448975 -66219030 + FLAM_A SINE Alu 1 131 -2 521 284 118 34 chr20 448975 449160 -66218845 + L1ME1 LINE L1 1416 1645 -4751 328 330 69 35 chr20 449286 449547 -66218458 + L1ME1 LINE L1 1918 2187 -4209 255 220 11 55 chr20 449574 449665 -66218340 + L1ME1 LINE L1 2201 2287 -3930 * 2136 195 73 91 chr20 449656 449921 -66218084 + L1ME1 LINE L1 4725 4993 -1242 1843 157 0 0 chr20 449921 450195 -66217810 - AluSx SINE Alu -22 290 17 2136 195 73 91 chr20 450195 451166 -66216839 + L1ME1 LINE L1 4993 5923 -312 816 204 0 0 chr20 451167 451299 -66216706 - FLAM_C SINE Alu -10 133 2 374 86 200 0 chr20 451299 451369 -66216636 + L1ME1 LINE L1 5840 5923 -243 1231 130 31 16 chr20 451369 451561 -66216444 + MER1B DNA MER1_type 1 195 -102 2698 157 87 29 chr20 451679 452103 -66215902 + L1MD3 LINE L1 7401 7866 -129 1378 165 105 35 chr20 452103 452388 -66215617 - AluJo SINE Alu -7 305 1 2698 157 87 29 chr20 452388 452516 -66215489 + L1MD3 LINE L1 7866 7985 -10 2087 191 19 24 chr20 452559 453021 -66214984 + L1ME1 LINE L1 5494 5953 -213 1581 65 0 0 chr20 453021 453206 -66214799 + AluY SINE Alu 1 185 -126 704 58 0 0 chr20 453206 453293 -66214712 + AluY SINE Alu 218 304 -7 573 272 97 19 chr20 453293 453499 -66214506 + L1ME1 LINE L1 5945 6166 0 1929 130 20 13 chr20 453553 453852 -66214153 + AluSx SINE Alu 1 301 -11 1416 105 85 74 chr20 453884 454142 -66213863 + AluSx SINE Alu 44 304 -8 458 125 38 12 chr20 454169 454249 -66213756 + L1MA6 LINE L1 6215 6296 -4 1293 207 79 8 chr20 454254 454520 -66213485 + AluJo SINE Alu 2 286 -16 23 0 0 0 chr20 454530 454553 -66213452 + AT_rich Low_complexity Low_complexity 1 23 0 291 136 102 0 chr20 454576 454635 -66213370 + L1M4 LINE L1 2945 3009 -3137 911 144 23 0 chr20 454641 454773 -66213232 + AluJo SINE Alu 1 135 -177 2622 52 3 0 chr20 454782 455090 -66212915 + AluY SINE Alu 1 309 -2 1520 151 3 102 chr20 455102 455427 -66212578 + AluJo SINE Alu 1 293 -19 793 168 15 29 chr20 455603 455740 -66212265 + AluJo SINE Alu 2 136 -176 1527 131 75 75 chr20 455740 456022 -66211983 + AluJo SINE Alu 1 282 -30 1996 103 28 14 chr20 456085 456367 -66211638 + AluSg SINE Alu 1 286 -24 618 79 0 0 chr20 456367 456456 -66211549 + (GA)n Simple_repeat Simple_repeat 2 90 0 357 254 44 33 chr20 456521 456702 -66211303 + L1M4 LINE L1 3275 3457 -2689 766 149 0 0 chr20 457142 457249 -66210756 - AluSq/x SINE Alu -205 108 2 1213 164 66 145 chr20 457855 458173 -66209832 - AluJo SINE Alu -9 293 1 4263 154 23 16 chr20 458368 458446 -66209559 + MER44D DNA MER2_type 33 109 -2378 1481 167 68 14 chr20 458446 458737 -66209268 - AluJo SINE Alu -20 292 1 4263 154 23 16 chr20 458737 459353 -66208652 + MER44D DNA MER2_type 109 604 -1 2153 174 61 30 chr20 459396 459868 -66208137 - L1MB7 LINE L1 -19 6165 5679 1913 147 3 19 chr20 459871 460185 -66207820 - AluJo SINE Alu -3 309 1 1970 128 7 3 chr20 460214 460512 -66207493 + AluSq SINE Alu 1 299 -14 2005 78 7 55 chr20 461581 461888 -66206117 - AluSc SINE Alu -17 292 1 1072 130 0 0 chr20 462868 463022 -66204983 + AluSg/x SINE Alu 137 290 -22 197 296 99 12 chr20 463540 463621 -66204384 - MIR SINE MIR -114 148 61 1978 116 6 25 chr20 464158 464476 -66203529 + AluSx SINE Alu 1 312 0 819 151 0 0 chr20 464491 464610 -66203395 + FLAM_C SINE Alu 7 125 -18 2021 95 56 0 chr20 464885 465170 -66202835 + AluSx SINE Alu 1 301 -11 438 128 163 0 chr20 465840 465926 -66202079 - MIR SINE MIR -75 187 88 213 297 27 14 chr20 465922 465996 -66202009 - MIR SINE MIR -102 160 86 * 198 182 73 73 chr20 466241 466296 -66201709 + L2 LINE L2 3216 3270 -2 1827 106 67 14 chr20 467375 467658 -66200347 - AluSx SINE Alu -14 298 1 2336 188 155 11 chr20 468543 469090 -66198915 - MLT1E2 LTR MaLR 0 626 1 918 275 85 87 chr20 469090 469701 -66198304 - MLT1E2-int LTR MaLR 0 1371 762 1087 220 13 4 chr20 469717 469949 -66198056 - MLT1E2-int LTR MaLR -889 482 249 727 106 19 0 chr20 469955 470059 -66197946 - AluJb SINE Alu -19 293 188 370 172 253 0 chr20 470062 470161 -66197844 - MLT1E2-int LTR MaLR -1247 124 1 2959 183 37 41 chr20 470161 470790 -66197215 - MLT1E2 LTR MaLR 0 626 1 689 244 146 28 chr20 471579 471792 -66196213 - MIR SINE MIR -23 239 2 2281 58 7 0 chr20 471846 472141 -66195864 - AluSg SINE Alu -13 297 1 270 329 67 48 chr20 473826 474142 -66193863 + L2 LINE L2 2636 2957 -357 300 258 16 0 chr20 474757 474819 -66193186 + MIR3 SINE MIR 114 176 -32 525 308 263 23 chr20 474912 475352 -66192653 - L2 LINE L2 -3 3310 2752 487 316 35 0 chr20 475717 475888 -66192117 - MIR SINE MIR -40 222 46 180 0 0 0 chr20 475899 475919 -66192086 + (TC)n Simple_repeat Simple_repeat 2 21 0 1610 165 4 11 chr20 475919 476086 -66191919 - AluJo SINE Alu -27 285 119 204 40 0 0 chr20 476086 476111 -66191894 + (TTA)n Simple_repeat Simple_repeat 2 26 0 1610 165 4 11 chr20 476111 476210 -66191795 - AluJo SINE Alu -193 119 21 1346 277 62 57 chr20 476241 476787 -66191218 - MLT1E2 LTR MaLR 0 549 1 268 264 14 0 chr20 476804 476876 -66191129 + L1ME LINE L1 5759 5831 -290 869 183 29 11 chr20 476876 477051 -66190954 - MIR SINE MIR -22 240 63 2108 100 14 0 chr20 477195 477486 -66190519 - AluSq SINE Alu -18 295 1 2296 74 3 0 chr20 477548 477844 -66190161 + AluY SINE Alu 1 297 -14 1698 162 0 10 chr20 477989 478279 -66189726 - AluJb SINE Alu -5 307 21 200 213 0 0 chr20 478391 478438 -66189567 + T-rich Low_complexity Low_complexity 1 47 0 391 246 10 13 chr20 478666 478771 -66189234 + MIR SINE MIR 48 147 -61 2103 126 3 3 chr20 478775 479150 -66188855 + AluSx SINE Alu 1 375 0 410 245 27 54 chr20 479195 479342 -66188663 + MLT1H LTR MaLR 68 210 -339 22 0 0 0 chr20 479498 479520 -66188485 + AT_rich Low_complexity Low_complexity 1 22 0 296 288 32 48 chr20 479806 479931 -66188074 + MIR SINE MIR 140 262 0 711 300 146 6 chr20 479933 480276 -66187729 - L2 LINE L2 -62 3251 2861 3036 231 82 58 chr20 480384 480992 -66187013 - L2 LINE L2 -468 2846 2255 1645 178 48 66 chr20 480992 481385 -66186620 + MLT1B LTR MaLR 4 389 -1 3036 231 82 58 chr20 481385 481424 -66186581 - L2 LINE L2 -1059 2255 2218 2131 105 7 0 chr20 481424 481718 -66186287 + AluSq SINE Alu 1 296 -17 3036 231 82 58 chr20 481718 482075 -66185930 - L2 LINE L2 -1096 2218 1816 267 103 0 0 chr20 482090 482129 -66185876 + (GGAA)n Simple_repeat Simple_repeat 4 42 0 2301 93 0 0 chr20 482132 482433 -66185572 - AluSx SINE Alu -11 301 1 2673 208 122 41 chr20 482434 482463 -66185542 + L1MC4 LINE L1 7100 7125 -917 2193 105 0 3 chr20 482463 482767 -66185238 + AluSq SINE Alu 1 303 -10 2673 208 122 41 chr20 482767 483128 -66184877 + L1MC4 LINE L1 7125 7456 -586 2242 96 0 0 chr20 483128 483420 -66184585 + AluSg SINE Alu 1 292 -18 2673 208 122 41 chr20 483420 483833 -66184172 + L1MC4 LINE L1 7456 7982 -60 1731 172 3 0 chr20 483833 484123 -66183882 - AluJo SINE Alu -19 293 3 2673 208 122 41 chr20 484123 484188 -66183817 + L1MC4 LINE L1 7982 8040 -2 2468 234 114 22 chr20 484195 484965 -66183040 - L2 LINE L2 -1480 1834 994 445 292 17 17 chr20 484961 485081 -66182924 - MIR SINE MIR -129 133 14 * 182 88 0 29 chr20 485206 485240 -66182765 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 417 275 116 91 chr20 485353 485860 -66182145 - L2 LINE L2 -9 3304 2743 1323 151 50 107 chr20 485860 485982 -66182023 + AluJb SINE Alu 1 128 -184 2097 74 3 61 chr20 485982 486294 -66181711 + AluY SINE Alu 1 294 -17 1323 151 50 107 chr20 486294 486488 -66181517 + AluJb SINE Alu 128 299 -13 417 275 116 91 chr20 486488 486723 -66181282 - L2 LINE L2 -570 2743 2515 218 280 87 0 chr20 486974 487047 -66180958 + MIR SINE MIR 85 149 -59 1816 168 3 0 chr20 487084 487388 -66180617 + AluJb SINE Alu 1 305 -7 367 305 62 8 chr20 487425 487553 -66180452 - MIR3 SINE MIR -71 137 3 270 283 264 13 chr20 487639 487798 -66180207 + MIR SINE MIR 7 205 -57 924 245 138 47 chr20 487888 487991 -66180014 - MER20B DNA MER1_type -2 781 689 2255 79 0 3 chr20 487991 488283 -66179722 - AluSc SINE Alu -18 291 1 924 245 138 47 chr20 488283 488570 -66179435 - MER20B DNA MER1_type -94 689 342 2202 146 22 0 chr20 488570 488926 -66179079 + MLT1A1 LTR MaLR 2 365 0 924 245 138 47 chr20 488926 488983 -66179022 - MER20B DNA MER1_type -441 342 292 1874 134 22 116 chr20 488986 489168 -66178837 + L1MC2 LINE L1 5928 6125 -219 2031 77 0 71 chr20 489168 489504 -66178501 + AluSx SINE Alu 1 312 0 1874 134 22 116 chr20 489504 489715 -66178290 + L1MC2 LINE L1 6125 6277 -67 1494 183 33 36 chr20 489715 490016 -66177989 - AluJo SINE Alu -12 300 1 1874 134 22 116 chr20 490016 490069 -66177936 + L1MC2 LINE L1 6277 6333 -11 508 211 0 0 chr20 490095 490199 -66177806 - MER20B DNA MER1_type -494 289 186 287 325 25 42 chr20 490456 490581 -66177424 + MIR SINE MIR 41 163 -56 1269 256 153 9 chr20 490614 491059 -66176946 - L2 LINE L2 0 3313 2805 183 67 0 67 chr20 491344 491374 -66176631 - MER5A DNA MER1_type -35 154 127 320 155 17 17 chr20 491374 491432 -66176573 - AluJ/FLAM SINE Alu -244 58 1 255 238 95 29 chr20 491510 491615 -66176390 - MIR SINE MIR -67 141 30 319 288 85 72 chr20 491639 491792 -66176213 - MIR SINE MIR -29 233 79 226 321 205 9 chr20 491799 491911 -66176094 + MIR SINE MIR 16 149 -113 198 329 14 14 chr20 492259 492332 -66175673 + MIR SINE MIR 111 183 -79 550 269 45 6 chr20 492662 492818 -66175187 - MIR SINE MIR -38 224 63 925 214 78 79 chr20 493425 493958 -66174047 - L2 LINE L2 -1 3312 2771 2034 105 3 7 chr20 493958 494272 -66173733 - AluSx SINE Alu 0 312 5 925 214 78 79 chr20 494272 494422 -66173583 - L2 LINE L2 -542 2771 2622 228 274 57 47 chr20 494482 494588 -66173417 - MIR SINE MIR -10 252 146 783 184 13 13 chr20 494619 494777 -66173228 - L1MB5 LINE L1 0 6174 6017 418 267 0 9 chr20 494777 494882 -66173123 - MIR SINE MIR -98 164 61 2013 128 10 3 chr20 494972 495276 -66172729 - AluSq SINE Alu -7 306 1 2111 105 6 10 chr20 495303 495617 -66172388 + AluSp SINE Alu 1 313 0 248 220 121 26 chr20 495750 495924 -66172081 + MIR SINE MIR 9 248 -14 2130 105 0 0 chr20 496092 496407 -66171598 - AluSx SINE Alu 0 312 1 260 287 20 53 chr20 496683 496814 -66171191 + MIR SINE MIR 39 166 -62 454 138 0 0 chr20 497535 497600 -66170405 - AluSq/x SINE Alu -194 119 55 373 217 54 0 chr20 498058 498150 -66169855 + MIR SINE MIR 80 176 -86 2206 119 0 0 chr20 498861 499172 -66168833 - AluSx SINE Alu -1 311 1 2194 96 10 0 chr20 499627 499928 -66168077 - AluSg SINE Alu -6 304 1 1961 127 0 7 chr20 500030 500349 -66167656 + AluSx SINE Alu 1 317 0 1520 200 95 77 chr20 500372 500465 -66167540 - Charlie4a DNA MER1_type -1456 505 415 744 172 0 22 chr20 500465 500599 -66167406 - FLAM_C SINE Alu 0 133 3 1520 200 95 77 chr20 500599 501001 -66167004 - Charlie4a DNA MER1_type -1546 415 1 263 307 137 13 chr20 501060 501213 -66166792 - MIR3 SINE MIR -36 172 1 184 286 0 29 chr20 501738 501808 -66166197 + MIR SINE MIR 80 147 -115 181 311 40 0 chr20 502043 502117 -66165888 - L2 LINE L2 -131 3182 3106 184 242 326 5 chr20 502177 502367 -66165638 - L2 LINE L2 -351 2963 2713 261 296 74 9 chr20 502412 502520 -66165485 + MIR SINE MIR 31 145 -63 574 233 123 110 chr20 503248 503695 -66164310 + L2 LINE L2 2819 3271 -1 401 218 89 10 chr20 503702 503803 -66164202 - MIR SINE MIR -77 185 77 290 197 30 0 chr20 504287 504353 -66163652 + L3 LINE CR1 1405 1472 -105 232 174 22 0 chr20 504470 504516 -66163489 - Charlie8 DNA MER1_type -1003 1414 1368 783 245 180 11 chr20 504848 505126 -66162879 + LTR16C LTR ERVL 167 491 0 367 221 74 32 chr20 505744 505839 -66162166 - L2 LINE L2 -6 3266 3168 243 309 64 21 chr20 505911 506005 -66162000 - L2 LINE L2 -248 3065 2968 1724 170 3 19 chr20 506041 506358 -66161647 - AluJb SINE Alu 0 312 1 1244 238 31 48 chr20 506626 507034 -66160971 + MLT1J LTR MaLR 1 437 -74 2078 111 3 10 chr20 507093 507399 -66160606 + AluSx SINE Alu 9 312 0 474 340 0 13 chr20 507807 507966 -66160039 + MIR3 SINE MIR 45 201 -7 315 71 0 0 chr20 508057 508099 -66159906 + (CA)n Simple_repeat Simple_repeat 1 42 0 7692 31 0 0 chr20 508224 509526 -66158479 - L1PA5 LINE L1 -3 6151 4848 616 311 36 0 chr20 509529 509725 -66158280 + MIR SINE MIR 57 259 -3 363 335 55 0 chr20 509953 510117 -66157888 + MIR SINE MIR 90 262 0 954 80 7 0 chr20 510159 510297 -66157708 + L1MA2 LINE L1 6166 6304 0 242 274 59 13 chr20 510427 510580 -66157425 + (TTCA)n Simple_repeat Simple_repeat 4 163 0 * 439 220 27 65 chr20 510548 510734 -66157271 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 312 293 35 23 chr20 510681 510855 -66157150 + (TTCA)n Simple_repeat Simple_repeat 4 179 0 * 262 344 53 64 chr20 511117 511399 -66156606 - L2 LINE L2 0 3272 2994 2226 87 0 78 chr20 511407 511740 -66156265 - AluSx SINE Alu -5 307 1 234 279 58 19 chr20 511757 511861 -66156144 - MIR SINE MIR -67 141 34 1576 152 93 24 chr20 512118 512408 -66155597 + AluJo SINE Alu 1 310 -2 2058 146 7 0 chr20 512470 512765 -66155240 + AluSx SINE Alu 6 302 -10 483 291 0 33 chr20 512791 512942 -66155063 - MIR SINE MIR -14 248 103 2208 98 3 29 chr20 513300 513607 -66154398 - AluSx SINE Alu -11 301 3 1004 182 0 0 chr20 513668 513833 -66154172 + FRAM SINE Alu 1 165 -11 856 266 47 7 chr20 513839 514176 -66153829 - MLT1J LTR MaLR -135 376 6 224 284 68 34 chr20 514240 514328 -66153677 + L2 LINE L2 3133 3223 -49 267 219 24 37 chr20 514753 514835 -66153170 + CT-rich Low_complexity Low_complexity 4 84 0 248 270 11 0 chr20 514849 514938 -66153067 + L1MC4 LINE L1 6614 6703 -1339 313 203 17 0 chr20 515084 515143 -66152862 + L1MC4 LINE L1 6644 6703 -1339 210 143 0 0 chr20 515143 515178 -66152827 + (TG)n Simple_repeat Simple_repeat 1 35 0 464 317 10 63 chr20 515178 515383 -66152622 - L2 LINE L2 -18 3295 3102 2361 102 3 0 chr20 515452 515756 -66152249 - AluSg SINE Alu -5 305 1 1153 218 17 59 chr20 515760 515994 -66152011 - LTR37A LTR ERV1 -8 418 207 1798 140 13 39 chr20 515994 516301 -66151704 - AluJb SINE Alu -13 299 1 1153 218 17 59 chr20 516301 516470 -66151535 - LTR37A LTR ERV1 -219 207 32 243 312 26 0 chr20 516540 516617 -66151388 - L2 LINE L2 -31 3241 3163 5411 137 30 16 chr20 516697 517695 -66150310 - Tigger3b DNA MER2_type 0 1231 220 1518 94 5 0 chr20 517695 517887 -66150118 - AluSp SINE Alu -12 301 109 1664 169 55 48 chr20 517894 518314 -66149691 - MER113 DNA MER1_type? -74 447 25 266 214 14 0 chr20 518354 518424 -66149581 - MIR3 SINE MIR -54 154 84 1356 276 45 17 chr20 518826 519246 -66148759 + MLT1K LTR MaLR 61 492 -96 1268 204 6 100 chr20 519281 519294 -66148711 - AluSp SINE Alu -6 307 294 216 0 0 0 chr20 519294 519318 -66148687 + (TTAAA)n Simple_repeat Simple_repeat 4 27 0 1268 204 6 100 chr20 519318 519643 -66148362 - AluSp SINE Alu -19 294 1 284 98 98 0 chr20 519645 519696 -66148309 - FLAM SINE Alu -3 130 75 258 32 0 0 chr20 519713 519744 -66148261 + (CA)n Simple_repeat Simple_repeat 2 32 0 302 145 0 16 chr20 519746 519808 -66148197 + MLT1K LTR MaLR 525 585 -3 546 274 30 38 chr20 520171 520408 -66147597 - L2 LINE L2 -1 3312 3078 443 121 50 177 chr20 520417 520558 -66147447 + L1MB4 LINE L1 6058 6180 0 724 256 75 10 chr20 520565 520921 -66147084 - L2 LINE L2 -228 3085 2704 2134 129 7 0 chr20 521056 521350 -66146655 - AluSx SINE Alu -14 298 3 211 264 0 94 chr20 521823 521929 -66146076 + L2 LINE L2 3218 3313 0 549 330 24 5 chr20 521994 522200 -66145805 - MIR SINE MIR 0 262 53 1721 158 7 52 chr20 522356 522666 -66145339 - AluJo SINE Alu -16 296 1 2397 103 0 0 chr20 522678 522979 -66145026 - AluSx SINE Alu -11 301 1 446 281 39 59 chr20 523123 523326 -66144679 + L1MC4a LINE L1 5691 5889 -1919 1664 156 11 35 chr20 523328 523611 -66144394 - AluJb SINE Alu -36 276 1 321 281 39 55 chr20 523612 523740 -66144265 + L1MC4a LINE L1 5856 5981 -1827 426 221 0 10 chr20 523778 523882 -66144123 + MIR SINE MIR 158 260 -2 1349 57 0 0 chr20 523894 524052 -66143953 + AluY SINE Alu 146 303 -8 2317 108 0 6 chr20 524157 524471 -66143534 - AluSx SINE Alu 0 312 1 2059 152 10 0 chr20 524503 524812 -66143193 + AluJb SINE Alu 1 312 0 180 0 0 0 chr20 525055 525075 -66142930 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2286 116 7 0 chr20 525668 525978 -66142027 + AluSx SINE Alu 1 312 0 249 294 151 0 chr20 526052 526178 -66141827 + MIR SINE MIR 48 192 -70 292 275 90 3 chr20 526277 526466 -66141539 + MIR SINE MIR 2 262 0 308 270 73 36 chr20 526741 526878 -66141127 + L2 LINE L2 3162 3303 -10 488 246 183 6 chr20 526989 527164 -66140841 + MIR SINE MIR 32 237 -25 621 213 54 81 chr20 527213 527392 -66140613 + MIR SINE MIR 12 183 -79 2083 137 0 0 chr20 527392 527685 -66140320 - AluSx SINE Alu -18 294 2 621 213 54 81 chr20 527685 527763 -66140242 + MIR SINE MIR 183 262 0 239 277 50 10 chr20 527861 527962 -66140043 - MIR SINE MIR -76 132 28 902 232 31 105 chr20 528371 528581 -66139424 - L1MC4 LINE L1 0 8042 7881 1914 68 124 11 chr20 528581 528847 -66139158 - AluSg1 SINE Alu -13 296 1 902 232 31 105 chr20 528847 529085 -66138920 - L1MC4 LINE L1 -161 7881 7627 1915 142 28 3 chr20 529277 529566 -66138439 + AluJb SINE Alu 1 296 -16 198 308 33 0 chr20 529689 529780 -66138225 + MIR SINE MIR 34 127 -81 222 289 70 26 chr20 529840 529954 -66138051 + MIR SINE MIR 26 144 -64 364 318 128 5 chr20 530292 530503 -66137502 + L1MC4a LINE L1 5740 5976 -1832 686 200 13 26 chr20 530656 530811 -66137194 + L1ME3A LINE L1 6016 6168 -2 2436 88 3 0 chr20 530814 531110 -66136895 + AluSx SINE Alu 1 297 -15 1849 152 13 23 chr20 531178 531481 -66136524 + AluJo SINE Alu 1 300 -12 196 322 34 8 chr20 531826 531944 -66136061 - MIR3 SINE MIR -86 122 2 195 214 36 18 chr20 532252 532308 -66135697 + MIR SINE MIR 97 153 -55 182 363 99 0 chr20 532286 532377 -66135628 + L2 LINE L2 3163 3262 -10 * 553 91 0 0 chr20 532501 532578 -66135427 + FLAM_C SINE Alu 59 135 -8 313 283 78 6 chr20 533068 533234 -66134771 + L1MC4a LINE L1 5748 5925 -1883 192 135 0 0 chr20 533713 533750 -66134255 + (CA)n Simple_repeat Simple_repeat 1 37 0 335 317 43 6 chr20 534125 534289 -66133716 + L1MC4a LINE L1 5724 5893 -1915 1306 98 0 0 chr20 534415 534579 -66133426 - AluSc SINE Alu -24 285 122 220 265 84 12 chr20 535250 535333 -66132672 - MIR SINE MIR -100 108 20 274 222 0 42 chr20 535814 535886 -66132119 + MIR SINE MIR 104 172 -90 2417 83 0 7 chr20 535945 536247 -66131758 + AluSx SINE Alu 1 300 -12 574 279 131 18 chr20 536307 536536 -66131469 + MIR SINE MIR 8 262 0 290 297 187 7 chr20 537180 537335 -66130670 + MIR SINE MIR 37 219 -43 284 264 138 18 chr20 538652 538819 -66129186 + MIR SINE MIR 73 259 -3 22 70 0 0 chr20 539163 539206 -66128799 + GC_rich Low_complexity Low_complexity 1 43 0 232 205 51 17 chr20 539419 539536 -66128469 + (CCG)n Simple_repeat Simple_repeat 1 121 0 28 71 0 0 chr20 539689 539745 -66128260 + GC_rich Low_complexity Low_complexity 1 56 0 23 54 0 0 chr20 539773 539810 -66128195 + GC_rich Low_complexity Low_complexity 1 37 0 209 170 0 21 chr20 540044 540091 -66127914 + MIR SINE MIR 94 139 -69 352 265 106 41 chr20 540145 540315 -66127690 - MER5A DNA MER1_type -2 187 7 519 266 40 0 chr20 540432 540556 -66127449 - L2 LINE L2 -1 3312 3184 350 242 121 0 chr20 541742 541866 -66126139 + MIR SINE MIR 108 246 -16 419 258 177 43 chr20 542011 542310 -66125695 + L2 LINE L2 2834 3172 -141 * 453 200 0 0 chr20 542299 542379 -66125626 - L2 LINE L2 0 3313 3234 640 256 92 29 chr20 542433 542640 -66125365 - MIR SINE MIR -29 233 14 343 268 10 0 chr20 543438 543550 -66124455 - L1M3 LINE L1 -601 5579 5468 1921 79 12 0 chr20 543619 543860 -66124145 + AluSx SINE Alu 34 277 -35 225 0 0 0 chr20 543861 543886 -66124119 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 777 98 0 0 chr20 543885 543997 -66124008 + (TA)n Simple_repeat Simple_repeat 1 112 0 193 267 0 0 chr20 544165 544210 -66123795 - MIR SINE MIR 0 262 218 1513 199 59 3 chr20 544311 544633 -66123372 + MLT1F LTR MaLR 1 340 -202 241 157 12 108 chr20 544695 544713 -66123292 + MLT1G LTR MaLR 468 486 -104 1927 152 0 23 chr20 544713 545016 -66122989 + AluJo SINE Alu 1 296 -16 241 157 12 108 chr20 545016 545080 -66122925 + MLT1G LTR MaLR 486 590 0 893 259 95 39 chr20 545086 545422 -66122583 - MLT1J LTR MaLR -143 368 14 1053 215 18 0 chr20 545472 545695 -66122310 + MIR SINE MIR 15 241 -21 2015 124 28 0 chr20 545733 546023 -66121982 - AluSq SINE Alu -15 298 1 214 293 17 0 chr20 546139 546197 -66121808 + L2 LINE L2 3255 3313 0 388 263 20 72 chr20 546432 546557 -66121448 - MER103 DNA DNA -10 156 39 1704 192 10 45 chr20 546557 546870 -66121135 - AluJb SINE Alu -10 302 1 388 263 20 72 chr20 546870 546896 -66121109 - MER103 DNA DNA -127 39 13 756 219 115 0 chr20 547232 547415 -66120590 - MIR SINE MIR -3 259 56 1212 234 135 11 chr20 547797 548165 -66119840 + MLT1G LTR MaLR 168 577 -13 3069 191 16 35 chr20 548243 548768 -66119237 + MER82 DNA MER2_type 1 513 -140 2357 93 0 0 chr20 548768 549058 -66118947 - AluSc SINE Alu -19 290 1 3069 191 16 35 chr20 549058 549197 -66118808 + MER82 DNA MER2_type 513 653 0 533 238 41 17 chr20 549382 549572 -66118433 - MIR SINE MIR -44 218 25 193 171 0 0 chr20 549629 549664 -66118341 + L2 LINE L2 3216 3250 -22 252 155 197 14 chr20 550319 550390 -66117615 + MIR3 SINE MIR 81 164 -44 340 340 54 0 chr20 550483 550630 -66117375 - MIR SINE MIR -106 156 2 295 330 172 21 chr20 550651 550884 -66117121 + L2 LINE L2 2948 3215 -57 1934 156 0 3 chr20 550975 551258 -66116747 + AluJb SINE Alu 11 292 -20 1428 213 295 2 chr20 551258 551671 -66116334 + MLT1G LTR MaLR 57 590 0 976 230 113 54 chr20 551672 552361 -66115644 + L2 LINE L2 2570 3313 0 296 284 142 8 chr20 552965 553092 -66114913 + MIR SINE MIR 119 262 0 1875 168 6 22 chr20 553348 553663 -66114342 + AluJo SINE Alu 1 310 -2 595 285 7 0 chr20 553723 553874 -66114131 + MIR SINE MIR 45 196 -66 231 229 84 24 chr20 553882 553965 -66114040 - MIR SINE MIR -85 177 90 272 266 11 64 chr20 554329 554423 -66113582 + L1MC4a LINE L1 5524 5612 -2196 347 301 41 8 chr20 554426 554549 -66113456 - L2 LINE L2 -40 3273 3147 1194 233 106 65 chr20 554734 555253 -66112752 + MLT1H1 LTR MaLR 16 555 0 242 240 0 0 chr20 555256 555306 -66112699 + L1MC4a LINE L1 5611 5660 -510 449 337 30 0 chr20 555689 555891 -66112114 + L1MC4a LINE L1 5714 5921 -1887 2349 112 0 0 chr20 556386 556682 -66111323 - AluSg SINE Alu -14 296 1 1248 244 71 92 chr20 556712 557286 -66110719 + MLT1F1 LTR MaLR 6 567 0 711 95 0 63 chr20 557419 557545 -66110460 - AluSp/q SINE Alu -4 309 192 338 303 41 46 chr20 557602 557797 -66110208 - L1ME3A LINE L1 -284 5886 5693 345 284 81 51 chr20 557938 558135 -66109870 + L2 LINE L2 3108 3310 -3 202 276 86 0 chr20 558147 558205 -66109800 + MIR3 SINE MIR 104 166 -42 644 259 71 13 chr20 558340 558564 -66109441 - MIR SINE MIR 0 262 26 1749 148 7 14 chr20 558782 559060 -66108945 - AluJo SINE Alu -36 276 1 851 253 21 21 chr20 559063 559296 -66108709 - MIR SINE MIR -13 249 17 222 171 49 0 chr20 559471 559512 -66108493 + polypurine Low_complexity Low_complexity 5 47 0 502 333 146 23 chr20 559581 559721 -66108284 + L2 LINE L2 2820 2942 -330 2355 107 0 7 chr20 559721 560029 -66107976 + AluSx SINE Alu 2 307 -5 502 333 146 23 chr20 560029 560273 -66107732 + L2 LINE L2 2942 3251 -21 194 274 20 0 chr20 560304 560355 -66107650 + L2 LINE L2 3221 3272 0 547 303 7 7 chr20 560539 560694 -66107311 + MIR SINE MIR 77 231 -31 2493 185 27 119 chr20 560742 561204 -66106801 - L1MC4 LINE L1 0 8042 7539 1949 123 32 0 chr20 561204 561488 -66106517 - AluSx SINE Alu -18 294 2 2493 185 27 119 chr20 561488 561545 -66106460 - L1MC4 LINE L1 -503 7539 7478 183 42 0 0 chr20 561545 561569 -66106436 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2183 89 3 3 chr20 561573 561855 -66106150 - AluSq SINE Alu -31 282 1 2493 185 27 119 chr20 561855 562277 -66105728 - L1MC4 LINE L1 -567 7475 7182 279 335 56 6 chr20 562385 562564 -66105441 - L1MC4a LINE L1 -1791 6017 5830 262 247 0 27 chr20 562618 562691 -66105314 - MIR3 SINE MIR -51 157 87 230 269 115 31 chr20 563215 563345 -66104660 + MIR3 SINE MIR 16 156 -52 602 205 214 3 chr20 564544 564716 -66103289 - MIR SINE MIR -32 230 25 441 245 31 44 chr20 565053 565212 -66102793 + MIR3 SINE MIR 20 176 -32 237 263 0 18 chr20 565202 565259 -66102746 + L2 LINE L2 3008 3063 -209 * 225 264 0 0 chr20 565329 565382 -66102623 - L2 LINE L2 -4 3268 3216 198 220 40 0 chr20 565418 565468 -66102537 + L2 LINE L2 3262 3313 0 746 219 36 101 chr20 565504 565892 -66102113 - MER113 DNA MER1_type? 0 521 159 805 198 6 6 chr20 565953 566125 -66101880 + L1ME1 LINE L1 5986 6157 -9 1726 146 47 7 chr20 566150 566424 -66101581 + AluSx SINE Alu 1 285 -27 405 54 0 0 chr20 566424 566480 -66101525 + (CCA)n Simple_repeat Simple_repeat 3 58 0 298 179 0 0 chr20 566489 566545 -66101460 - MER113 DNA MER1_type? -432 89 34 252 310 0 0 chr20 566573 566644 -66101361 + (TGAA)n Simple_repeat Simple_repeat 3 73 0 421 323 127 31 chr20 566653 566882 -66101123 - L3 LINE CR1 -74 1503 1253 560 307 157 16 chr20 566943 567249 -66100756 - L2 LINE L2 -92 3221 2873 1593 168 3 46 chr20 567451 567600 -66100405 + AluJo SINE Alu 1 132 -180 2224 100 7 7 chr20 567600 567900 -66100105 + AluSg SINE Alu 1 300 -10 1593 168 3 46 chr20 567900 568053 -66099952 + AluJo SINE Alu 132 290 -22 766 314 46 0 chr20 568083 568322 -66099683 + MIR SINE MIR 12 261 -1 2037 116 14 0 chr20 568516 568809 -66099196 - AluSx SINE Alu -15 297 1 2231 106 0 0 chr20 568995 569297 -66098708 - AluSg SINE Alu -8 302 1 930 258 122 48 chr20 569329 570013 -66097992 + L2 LINE L2 2517 3267 -46 341 154 31 0 chr20 570394 570459 -66097546 - MIR SINE MIR -92 170 104 606 188 56 42 chr20 570480 570624 -66097381 + MIR SINE MIR 117 262 0 286 241 24 12 chr20 570632 570715 -66097290 - MIR SINE MIR -149 113 30 1572 177 33 20 chr20 570727 571027 -66096978 + AluJo SINE Alu 5 308 -4 203 170 21 0 chr20 571040 571087 -66096918 + (CAA)n Simple_repeat Simple_repeat 3 50 0 247 293 15 21 chr20 571497 571832 -66096173 + (GGGTG)n Simple_repeat Simple_repeat 1 332 0 229 361 0 50 chr20 572171 572290 -66095715 + MIR SINE MIR 76 188 -74 180 125 0 0 chr20 572725 572757 -66095248 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 274 298 21 22 chr20 572949 573129 -66094876 + L1MC/D LINE L1 5483 5642 -524 303 336 35 0 chr20 573149 573265 -66094740 + L1MC/D LINE L1 5710 5829 -1979 760 251 138 10 chr20 573275 573390 -66094615 - L2 LINE L2 0 3313 3214 1803 157 7 20 chr20 573390 573695 -66094310 + AluJo SINE Alu 1 301 -11 760 251 138 10 chr20 573695 573870 -66094135 - L2 LINE L2 -99 3214 2986 31 44 0 0 chr20 574094 574139 -66093866 + AT_rich Low_complexity Low_complexity 1 45 0 1554 170 20 30 chr20 574156 574456 -66093549 + AluJo SINE Alu 1 297 -15 899 150 0 0 chr20 574499 574632 -66093373 + AluSq/x SINE Alu 1 133 -180 190 271 47 35 chr20 574774 574859 -66093146 - L2 LINE L2 -179 3093 3008 220 314 127 17 chr20 575355 575473 -66092532 - MIR SINE MIR -72 190 60 720 185 7 46 chr20 575549 575978 -66092027 + MER5A DNA MER1_type 2 146 -43 1660 151 65 4 chr20 575662 575941 -66092064 + AluJb SINE Alu 1 296 -16 303 284 62 80 chr20 575941 576018 -66091987 - MER5A DNA MER1_type -97 92 15 1395 136 36 0 chr20 576040 576291 -66091714 - L1MD3 LINE L1 -3 7992 7733 1654 234 29 39 chr20 576776 577259 -66090746 + MLT1H LTR MaLR 72 549 0 446 300 62 23 chr20 577529 577786 -66090219 + MLT1J LTR MaLR 234 500 -11 183 347 41 10 chr20 577911 578009 -66089996 - MIR SINE MIR -112 150 50 415 143 24 12 chr20 578484 578568 -66089437 - MER63 DNA MER1_type -303 759 675 284 283 121 46 chr20 578598 578771 -66089234 - L2 LINE L2 -34 3279 3094 2271 108 0 0 chr20 578831 579136 -66088869 + AluSx SINE Alu 1 305 -7 894 226 51 23 chr20 579155 579372 -66088633 + MIR SINE MIR 36 258 -4 806 328 128 18 chr20 579377 579922 -66088083 - L2 LINE L2 -337 2977 2373 364 331 143 11 chr20 580018 580193 -66087812 + MIR SINE MIR 2 199 -63 209 271 102 129 chr20 580229 580269 -66087736 - L2 LINE L2 -39 3233 3193 2198 192 90 13 chr20 580269 580737 -66087268 + MLT1D LTR MaLR 2 505 0 209 271 102 129 chr20 580737 580835 -66087170 - L2 LINE L2 -79 3193 3094 2123 83 0 0 chr20 580835 581112 -66086893 + AluSx SINE Alu 23 299 -13 209 271 102 129 chr20 581112 581304 -66086701 - L2 LINE L2 -178 3094 2911 439 279 168 37 chr20 581328 581626 -66086379 - L2 LINE L2 -41 3272 2936 473 328 108 4 chr20 581940 582172 -66085833 + MIR SINE MIR 7 262 0 448 232 49 44 chr20 582172 582308 -66085697 - MIR3 SINE MIR -36 172 34 34 65 0 0 chr20 582504 582566 -66085439 + GC_rich Low_complexity Low_complexity 1 62 0 25 0 0 0 chr20 582661 582686 -66085319 + GC_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr20 582946 582969 -66085036 + GC_rich Low_complexity Low_complexity 1 23 0 968 260 14 9 chr20 583100 583319 -66084686 - MIR SINE MIR -32 230 11 713 265 69 46 chr20 584181 584305 -66083700 - MLT1L LTR MaLR -40 575 455 2054 127 7 0 chr20 584305 584597 -66083408 + AluSx SINE Alu 1 294 -18 713 265 69 46 chr20 584597 584778 -66083227 - MLT1L LTR MaLR -160 455 263 503 298 0 0 chr20 584794 584945 -66083060 + L2 LINE L2 2830 2980 -333 478 233 47 23 chr20 584950 585079 -66082926 - MIR SINE MIR -4 258 127 336 174 92 18 chr20 585281 585390 -66082615 + LTR16C LTR ERVL 375 491 0 695 244 80 10 chr20 585434 585635 -66082370 + MIR SINE MIR 45 259 -3 311 185 43 33 chr20 585703 585795 -66082210 - MLT1K LTR MaLR 0 588 496 1184 274 40 44 chr20 585900 586401 -66081604 - MLT1J LTR MaLR -12 499 1 371 312 53 48 chr20 586568 586757 -66081248 - L2 LINE L2 -5 3308 3119 606 173 18 0 chr20 586778 586888 -66081117 - MLT1A1 LTR MaLR 0 365 254 623 145 8 69 chr20 586890 587021 -66080984 + MLT1A1 LTR MaLR 17 139 -226 423 107 0 0 chr20 587021 587077 -66080928 - Alu SINE Alu -16 296 241 1914 196 25 27 chr20 587077 587517 -66080488 + MLT-int LTR MaLR 180 618 -1117 368 148 0 0 chr20 587671 587732 -66080273 + MLT-int LTR MaLR 681 741 -994 2137 145 25 27 chr20 587945 588353 -66079652 + MLT1A2-int LTR MaLR 1317 1723 -12 565 110 33 0 chr20 588372 588463 -66079542 + MLT1A2 LTR MaLR 1 94 -280 374 214 36 0 chr20 588565 588649 -66079356 - MLT1L LTR MaLR -337 278 192 1835 112 0 12 chr20 589500 589588 -66078417 + AluSx SINE Alu 48 136 -176 2106 109 16 0 chr20 589588 589891 -66078114 + AluSc SINE Alu 1 308 -1 1835 112 0 12 chr20 589891 590061 -66077944 + AluSx SINE Alu 136 303 -9 264 304 205 9 chr20 590434 590546 -66077459 - L3 LINE CR1 -117 1460 1327 261 128 0 0 chr20 592025 592072 -66075933 + (TAAA)n Simple_repeat Simple_repeat 1 47 0 266 168 50 40 chr20 593550 593651 -66074354 + C-rich Low_complexity Low_complexity 5 106 0 335 295 144 29 chr20 594126 594301 -66073704 - MIR SINE MIR -63 145 3 348 233 0 92 chr20 594313 594433 -66073572 + MIR SINE MIR 105 213 -49 * 481 269 71 0 chr20 594405 594546 -66073459 - MIR SINE MIR -1 261 111 271 248 297 0 chr20 594623 594724 -66073281 + L2 LINE L2 3142 3272 0 242 288 72 27 chr20 595447 595558 -66072447 + L2 LINE L2 3155 3270 -2 523 239 238 12 chr20 595846 596037 -66071968 - MIR SINE MIR 0 262 35 313 259 170 0 chr20 596031 596143 -66071862 + L2 LINE L2 3140 3270 -2 * 453 254 44 0 chr20 596398 596512 -66071493 + MIR SINE MIR 3 121 -141 657 284 91 0 chr20 596555 596752 -66071253 - MIR SINE MIR 0 262 48 268 255 122 10 chr20 597239 597337 -66070668 + MIR3 SINE MIR 74 182 -26 422 214 255 0 chr20 597434 597579 -66070426 + MIR SINE MIR 81 262 0 294 116 0 0 chr20 597664 597707 -66070298 + MIR SINE MIR 81 123 -85 309 266 45 103 chr20 597863 598047 -66069958 + MIR SINE MIR 18 182 -49 196 222 48 32 chr20 598353 598416 -66069589 - MIR SINE MIR -86 122 59 323 380 83 8 chr20 598637 598875 -66069130 - MIR SINE MIR 0 262 1 248 200 46 15 chr20 599980 600045 -66067960 + MIR SINE MIR 84 150 -112 325 316 98 0 chr20 600349 600482 -66067523 - MIR3 SINE MIR -14 194 49 408 88 0 0 chr20 601800 601857 -66066148 + (TG)n Simple_repeat Simple_repeat 1 57 0 332 89 0 63 chr20 602128 602207 -66065798 + (TCCC)n Simple_repeat Simple_repeat 2 75 0 488 262 93 27 chr20 602739 602922 -66065083 - MIR3 SINE MIR -3 205 11 294 182 0 0 chr20 603745 603811 -66064194 + CT-rich Low_complexity Low_complexity 2 67 0 378 0 0 0 chr20 603811 603853 -66064152 + (CA)n Simple_repeat Simple_repeat 1 42 0 429 20 0 0 chr20 604100 604150 -66063855 + (TG)n Simple_repeat Simple_repeat 2 51 0 202 138 69 35 chr20 605004 605062 -66062943 + (CGCGG)n Simple_repeat Simple_repeat 2 61 0 413 300 6 38 chr20 605376 605598 -66062407 + GA-rich Low_complexity Low_complexity 1 214 0 209 176 0 0 chr20 606180 606214 -66061791 + G-rich Low_complexity Low_complexity 3 36 0 1741 149 0 35 chr20 606706 607017 -66060988 + AluJo SINE Alu 8 308 0 1482 97 5 5 chr20 607304 607511 -66060494 - AluSq SINE Alu -16 297 91 430 273 95 15 chr20 607574 607836 -66060169 + L2 LINE L2 2856 3200 -72 892 245 10 0 chr20 607861 608057 -66059948 + MIR SINE MIR 59 256 -6 720 280 93 59 chr20 608116 608470 -66059535 - L2 LINE L2 -61 3252 2887 207 69 0 0 chr20 608531 608560 -66059445 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 455 309 161 38 chr20 609241 609558 -66058447 + L1ME4a LINE L1 5624 5979 -142 2253 92 0 0 chr20 609621 609913 -66058092 + AluSc SINE Alu 1 292 -17 804 243 106 25 chr20 610157 610392 -66057613 + MIR SINE MIR 9 262 0 216 300 0 17 chr20 610390 610450 -66057555 - MIR SINE MIR -56 206 148 * 196 300 43 0 chr20 610688 610758 -66057247 + MIR SINE MIR 81 153 -55 371 266 201 7 chr20 610797 610951 -66057054 + MIR3 SINE MIR 20 203 -5 1172 286 104 7 chr20 611206 611629 -66056376 - LTR16B LTR ERVL 0 464 1 984 266 20 4 chr20 611647 611899 -66056106 - MIR SINE MIR -5 257 2 237 235 147 29 chr20 612052 612154 -66055851 + L2 LINE L2 2889 3002 -270 920 244 33 8 chr20 612220 612462 -66055543 - MIR SINE MIR -5 257 10 371 259 36 36 chr20 612560 612672 -66055333 + L2 LINE L2 3201 3312 -1 2401 109 0 0 chr20 612841 613152 -66054853 + AluSx SINE Alu 1 311 -1 1881 173 7 3 chr20 613425 613731 -66054274 - AluJo SINE Alu -5 307 1 402 283 17 0 chr20 613731 613860 -66054145 + MIR SINE MIR 43 175 -62 181 276 19 67 chr20 613904 614009 -66053996 - MIR3 SINE MIR -27 181 82 345 324 150 19 chr20 614426 614639 -66053366 + MIR SINE MIR 22 262 0 291 279 45 9 chr20 614861 614972 -66053033 - MIR SINE MIR -58 204 90 1914 155 13 10 chr20 614973 615108 -66052897 + AluSx SINE Alu 1 134 -178 441 0 0 0 chr20 615108 615157 -66052848 + (TAA)n Simple_repeat Simple_repeat 2 50 0 1914 155 13 10 chr20 615157 615355 -66052650 + AluSx SINE Alu 134 312 0 802 280 85 0 chr20 615384 615570 -66052435 - L2 LINE L2 -14 3299 3081 2719 30 0 0 chr20 615570 615868 -66052137 + AluY SINE Alu 1 298 -13 802 280 85 0 chr20 615868 615952 -66052053 - L2 LINE L2 -232 3081 3006 334 250 52 59 chr20 616135 616271 -66051734 + MIR SINE MIR 93 227 -35 466 320 31 35 chr20 616448 616676 -66051329 + LTR67 LTR ERVL 236 462 -95 284 293 71 0 chr20 616852 616951 -66051054 + L2 LINE L2 3208 3313 0 588 341 14 9 chr20 616957 617171 -66050834 - L3 LINE CR1 -398 1179 965 476 281 43 7 chr20 617313 617452 -66050553 + MER117 DNA MER1_type 1 144 -53 1308 172 15 11 chr20 617491 617758 -66050247 + Charlie4 DNA MER1_type 8 275 -1686 264 282 128 40 chr20 617943 618092 -66049913 - L2 LINE L2 -196 3076 2915 390 316 11 17 chr20 618967 619144 -66048861 + MIR SINE MIR 9 184 -78 467 208 87 54 chr20 619218 619367 -66048638 - L2 LINE L2 0 3313 3160 495 253 139 21 chr20 619382 619576 -66048429 + L1MC4 LINE L1 5620 5836 -1972 357 150 0 0 chr20 619586 619646 -66048359 - FLAM_A SINE Alu 0 133 74 5802 217 70 33 chr20 620046 620231 -66047774 + L1MC4 LINE L1 6459 6636 -1406 423 0 0 0 chr20 620231 620278 -66047727 + (TG)n Simple_repeat Simple_repeat 1 47 0 5802 217 70 33 chr20 620278 621618 -66046387 + L1MC4 LINE L1 6636 8040 -2 613 283 62 0 chr20 621636 621876 -66046129 - L2 LINE L2 -152 3161 2907 953 211 29 5 chr20 621876 622085 -66045920 - MLT1E2 LTR MaLR 0 626 413 240 111 0 0 chr20 622085 622121 -66045884 + (T)n Simple_repeat Simple_repeat 1 36 0 1428 206 45 13 chr20 622131 622510 -66045495 - HUERS-P3 LTR ERV1 -8453 466 1 617 157 35 76 chr20 622510 622682 -66045323 - LTR19C LTR ERV1 0 779 615 * 780 207 181 50 chr20 622657 622922 -66045083 - MLT1E2 LTR MaLR -178 448 138 2508 131 33 17 chr20 622922 623150 -66044855 - MSTB LTR MaLR 0 426 186 2131 142 0 6 chr20 623150 623461 -66044544 - AluSx SINE Alu -3 309 1 2508 131 33 17 chr20 623461 623651 -66044354 - MSTB LTR MaLR -240 186 1 780 207 181 50 chr20 623651 623684 -66044321 - MLT1E2 LTR MaLR -488 138 111 451 156 142 78 chr20 623683 623824 -66044181 - MLT1E2 LTR MaLR -504 150 1 * 236 203 51 0 chr20 623826 623905 -66044100 - L2 LINE L2 -360 2912 2830 320 283 22 22 chr20 624606 624744 -66043261 - L1MC4a LINE L1 -1910 5898 5761 949 268 92 9 chr20 624982 625553 -66042452 - L1MC4a LINE L1 -461 5701 5067 768 219 128 45 chr20 625561 625586 -66042419 - L1ME4a LINE L1 -153 5968 5946 2429 73 0 7 chr20 625586 625889 -66042116 - AluY SINE Alu -9 302 2 768 219 128 45 chr20 625889 626237 -66041768 - L1ME4a LINE L1 -175 5946 5564 1714 128 23 79 chr20 626680 626985 -66041020 - AluJb SINE Alu -20 292 5 324 249 76 49 chr20 627172 627357 -66040648 - MER113 DNA MER1_type? -331 190 1 330 258 23 62 chr20 627578 627706 -66040299 - MIR SINE MIR -71 191 69 208 301 49 65 chr20 627824 627947 -66040058 - MIR SINE MIR 0 262 142 374 287 19 83 chr20 627982 628198 -66039807 - L2 LINE L2 -93 3220 3019 2519 81 0 3 chr20 628343 628650 -66039355 + AluSx SINE Alu 1 306 -6 370 253 44 0 chr20 628938 629029 -66038976 + MER91A DNA MER1_type 102 196 0 200 283 33 0 chr20 629794 629854 -66038151 - MIR SINE MIR -122 140 79 1725 138 18 25 chr20 630052 630334 -66037671 - AluJo SINE Alu -2 310 31 262 260 26 13 chr20 630471 630548 -66037457 + GA-rich Low_complexity Low_complexity 4 81 0 1790 89 133 0 chr20 630574 630822 -66037183 + AluSp SINE Alu 1 281 -32 207 0 0 0 chr20 630822 630845 -66037160 + (CAAT)n Simple_repeat Simple_repeat 4 26 0 185 91 0 30 chr20 630860 630893 -66037112 + (GGAA)n Simple_repeat Simple_repeat 2 33 0 654 270 11 0 chr20 631440 631625 -66036380 + MIR SINE MIR 43 229 -33 873 264 231 19 chr20 631861 631972 -66036033 + MLT1G LTR MaLR 10 96 -494 2176 75 24 27 chr20 631972 632285 -66035720 + AluSx SINE Alu 1 312 0 873 264 231 19 chr20 632285 632625 -66035380 + MLT1G LTR MaLR 96 588 -2 561 284 27 0 chr20 632629 632777 -66035228 - MIR SINE MIR -62 200 49 1482 255 56 33 chr20 633290 633718 -66034287 - MLT1J LTR MaLR 0 511 74 284 340 78 5 chr20 633794 633985 -66034020 + L2 LINE L2 2684 2888 -426 2236 119 3 0 chr20 634484 634777 -66033228 - AluSp SINE Alu -19 294 1 274 246 111 18 chr20 634778 634895 -66033110 - MIR SINE MIR -67 141 25 363 246 97 15 chr20 634969 635103 -66032902 - MIR3 SINE MIR -41 167 23 555 199 7 59 chr20 635115 635251 -66032754 - L2 LINE L2 -2 3311 3183 733 275 83 29 chr20 635345 635730 -66032275 - L2 LINE L2 -79 3234 2829 278 241 89 0 chr20 636262 636341 -66031664 + MIR3 SINE MIR 81 166 -42 838 244 43 26 chr20 636349 636579 -66031426 + MIR SINE MIR 29 262 0 363 295 108 23 chr20 636794 636923 -66031082 - MIR3 SINE MIR -27 181 42 1847 157 0 32 chr20 637662 637974 -66030031 - AluJo SINE Alu -10 302 1 282 227 213 57 chr20 637982 638123 -66029882 - MIR SINE MIR -17 245 83 2162 206 23 59 chr20 638259 638832 -66029173 + MER92C LTR ERV1 1 552 -2 185 318 94 57 chr20 638863 639055 -66028950 + MIR SINE MIR 63 261 -1 30 27 0 0 chr20 639441 639478 -66028527 + GC_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr20 639560 639582 -66028423 + GC_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr20 640532 640556 -66027449 + (TG)n Simple_repeat Simple_repeat 2 25 0 209 59 59 0 chr20 641866 641900 -66026105 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 6365 234 82 48 chr20 641975 642123 -66025882 - L1MEc LINE L1 -3573 2642 2501 2361 94 0 7 chr20 642123 642420 -66025585 - AluSg SINE Alu -15 295 1 6365 234 82 48 chr20 642420 642951 -66025054 - L1MEc LINE L1 -3714 2501 1990 2161 113 25 0 chr20 642951 643234 -66024771 + AluSx SINE Alu 3 292 -20 6365 234 82 48 chr20 643234 645076 -66022929 - L1MEc LINE L1 -4225 1990 40 768 245 57 74 chr20 645078 645520 -66022485 - L2 LINE L2 -275 3038 2583 359 266 22 36 chr20 645541 645680 -66022325 + L1ME3A LINE L1 5991 6127 -43 631 279 11 0 chr20 645757 645940 -66022065 - L2 LINE L2 -710 2604 2420 275 296 99 0 chr20 645934 646015 -66021990 - MIR SINE MIR -17 245 157 * 803 290 120 3 chr20 646031 646331 -66021674 + MLT1K LTR MaLR 254 588 0 1900 170 3 0 chr20 646415 646703 -66021302 - AluJo SINE Alu -23 289 1 293 355 29 6 chr20 647054 647226 -66020779 + L2 LINE L2 2917 3092 -180 316 258 45 38 chr20 647405 647537 -66020468 + MIR3 SINE MIR 15 147 -61 726 228 151 15 chr20 647537 647743 -66020262 + MIR SINE MIR 2 235 -27 466 223 17 0 chr20 647851 647974 -66020031 + MIR3 SINE MIR 31 158 -50 2376 67 3 3 chr20 648087 648416 -66019589 + AluSq SINE Alu 1 329 0 221 327 44 0 chr20 648829 648942 -66019063 + MIR SINE MIR 34 151 -57 278 313 133 5 chr20 648994 649190 -66018815 - LTR16B LTR ERVL -228 222 3 205 273 0 0 chr20 649687 649731 -66018274 + (CA)n Simple_repeat Simple_repeat 2 45 0 528 239 159 0 chr20 649778 649941 -66018064 - MER5A DNA MER1_type 0 189 1 456 324 96 7 chr20 650020 650329 -66017676 - LTR16B LTR ERVL -136 328 31 323 299 95 7 chr20 650355 650492 -66017513 - MIR SINE MIR -22 240 92 266 214 135 0 chr20 650566 650655 -66017350 - MIR SINE MIR -112 150 50 194 196 0 43 chr20 650745 650791 -66017214 - MIR SINE MIR -59 149 106 1420 226 164 5 chr20 651387 651776 -66016229 + MLT1F1 LTR MaLR 109 559 -8 482 274 38 0 chr20 652724 652925 -66015080 + CT-rich Low_complexity Low_complexity 1 208 0 710 253 6 0 chr20 652930 653092 -66014913 + MIR SINE MIR 10 172 -90 520 223 122 0 chr20 653645 653784 -66014221 - MIR SINE MIR -19 243 88 189 0 0 0 chr20 653784 653805 -66014200 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 213 261 0 31 chr20 653842 653907 -66014098 - MIR SINE MIR -103 105 43 2419 96 0 0 chr20 654066 654368 -66013637 - AluSx SINE Alu -10 302 1 401 210 0 0 chr20 654387 654468 -66013537 - MIR SINE MIR -111 151 71 200 139 0 23 chr20 654727 654770 -66013235 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 403 58 0 0 chr20 654808 654860 -66013145 + Alu SINE Alu 1 52 -258 2532 84 3 0 chr20 655140 655451 -66012554 + AluSp SINE Alu 1 312 -1 264 307 58 2 chr20 655600 655728 -66012277 - MIR SINE MIR -55 153 50 221 271 32 47 chr20 655783 655895 -66012110 - MIR SINE MIR -85 123 13 805 190 226 0 chr20 655963 656184 -66011821 - LTR37B LTR ERV1 -1 467 197 387 236 0 11 chr20 656247 656336 -66011669 - LTR37B LTR ERV1 -377 91 4 302 60 100 0 chr20 656910 657010 -66010995 + (TA)n Simple_repeat Simple_repeat 2 111 0 315 49 0 0 chr20 657010 657051 -66010954 + (GA)n Simple_repeat Simple_repeat 2 42 0 2333 38 0 45 chr20 657051 657342 -66010663 - AluSp SINE Alu -34 279 2 212 236 121 73 chr20 658599 658764 -66009241 + L2 LINE L2 2569 2741 -573 2071 120 33 10 chr20 658830 659130 -66008875 + AluSx SINE Alu 1 307 -5 291 28 0 0 chr20 659157 659193 -66008812 + (TCC)n Simple_repeat Simple_repeat 1 36 0 1676 117 140 0 chr20 659193 659458 -66008547 - AluSx SINE Alu 0 302 1 1251 246 35 85 chr20 659459 659652 -66008353 - MLT1J LTR MaLR -67 444 282 2220 106 3 0 chr20 659652 659945 -66008060 - AluY SINE Alu -17 294 1 1251 246 35 85 chr20 659945 660174 -66007831 - MLT1J LTR MaLR -229 282 43 2317 110 0 0 chr20 660184 660476 -66007529 + AluSx SINE Alu 1 292 -20 929 270 25 0 chr20 660530 660771 -66007234 + L1MC4a LINE L1 5619 5865 -1943 1893 224 49 29 chr20 660773 661283 -66006722 + L1ME2 LINE L1 5564 6083 -81 317 296 102 29 chr20 662116 662166 -66005839 - L2 LINE L2 -79 3234 3189 1486 216 82 44 chr20 662166 662579 -66005426 + MLT1C LTR MaLR 1 434 -33 2062 159 0 9 chr20 662579 662894 -66005111 - AluSx SINE Alu 0 312 1 1486 216 82 44 chr20 662894 662930 -66005075 + MLT1C LTR MaLR 434 467 0 317 296 102 29 chr20 662930 662985 -66005020 - L2 LINE L2 -124 3189 3139 279 0 0 0 chr20 662985 663016 -66004989 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 317 296 102 29 chr20 663016 663115 -66004890 - L2 LINE L2 -174 3139 3014 252 0 0 0 chr20 664022 664050 -66003955 + (TG)n Simple_repeat Simple_repeat 2 29 0 561 182 0 0 chr20 664056 664144 -66003861 - FLAM_A SINE Alu -25 117 30 612 171 17 0 chr20 664164 664281 -66003724 - L1ME1 LINE L1 -56 6110 5992 2140 138 7 0 chr20 664335 664639 -66003366 + AluSx SINE Alu 1 306 -6 284 197 30 0 chr20 664646 664712 -66003293 + MLT1C LTR MaLR 40 107 -398 732 264 70 13 chr20 664712 664939 -66003066 + MLT1C LTR MaLR 228 467 0 1806 210 18 13 chr20 664939 665335 -66002670 - L1ME1 LINE L1 -187 5979 5582 1166 140 0 17 chr20 665335 665513 -66002492 + AluSg/x SINE Alu 133 307 -5 1835 161 0 13 chr20 665529 665827 -66002178 + AluJb SINE Alu 12 305 -7 314 137 0 0 chr20 665827 665878 -66002127 - L1ME1 LINE L1 -656 5586 5536 1131 130 243 45 chr20 665916 666163 -66001842 + AluYa5 SINE Alu 1 296 -15 266 160 160 40 chr20 666173 666248 -66001757 + MIR SINE MIR 150 233 -29 311 296 84 22 chr20 666393 666676 -66001329 - LTR16A LTR ERVL -2 448 123 344 273 62 45 chr20 666706 666882 -66001123 - Charlie8 DNA MER1_type -2226 191 13 2309 100 10 3 chr20 666905 667036 -66000969 + AluSq SINE Alu 1 130 -183 324 0 0 0 chr20 667036 667072 -66000933 + (TAA)n Simple_repeat Simple_repeat 2 37 0 2309 100 10 3 chr20 667072 667251 -66000754 + AluSq SINE Alu 130 313 0 214 309 37 12 chr20 667324 667405 -66000600 + L2 LINE L2 3189 3271 -42 918 157 28 15 chr20 667493 667692 -66000313 + L1M4 LINE L1 5290 5492 -686 2545 72 3 0 chr20 667714 668021 -65999984 + AluSp SINE Alu 1 308 -5 756 254 11 37 chr20 668029 668218 -65999787 + MIR SINE MIR 77 260 -2 521 281 33 0 chr20 668234 668387 -65999618 + MIR SINE MIR 51 208 -54 851 177 10 62 chr20 669480 669672 -65998333 - MIR SINE MIR 0 262 81 986 201 7 126 chr20 669702 669996 -65998009 - LTR8 LTR ERV1 -272 419 161 272 111 44 0 chr20 669988 670033 -65997972 - LTR8A LTR ERV1 -680 47 1 * 265 338 0 0 chr20 670033 670110 -65997895 - MIR SINE MIR -178 84 8 2365 99 0 0 chr20 670348 670650 -65997355 + AluSg SINE Alu 1 302 -8 2086 142 3 3 chr20 670728 671031 -65996974 + AluSx SINE Alu 1 303 -9 2159 122 165 8 chr20 671034 671404 -65996601 + MSTA LTR MaLR 1 428 0 767 213 77 0 chr20 671473 671642 -65996363 - MER63A DNA MER1_type -18 192 11 598 272 7 0 chr20 671679 671815 -65996190 + MIR SINE MIR 2 138 -124 396 0 0 0 chr20 672533 672577 -65995428 + (TC)n Simple_repeat Simple_repeat 1 44 0 279 0 0 0 chr20 672576 672607 -65995398 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 495 275 128 16 chr20 672768 673026 -65994979 + L2 LINE L2 2689 2975 -339 466 265 116 7 chr20 673084 673231 -65994774 + MIR SINE MIR 35 197 -65 300 260 215 10 chr20 673243 673391 -65994614 + MLT1G1 LTR MaLR 3 216 -379 3618 244 21 14 chr20 673391 674208 -65993797 + L1M4b LINE L1 3 825 -6034 2736 247 61 41 chr20 674213 674436 -65993569 + L1M4b LINE L1 1330 1547 -5412 2367 108 0 0 chr20 674436 674741 -65993264 + AluSx SINE Alu 1 305 -7 2736 247 61 41 chr20 674741 675582 -65992423 + L1M4b LINE L1 1547 2415 -4544 3128 243 32 47 chr20 675730 675993 -65992012 + L1M4b LINE L1 2476 2741 -4216 1606 161 19 58 chr20 675993 676304 -65991701 + AluSx SINE Alu 3 301 -11 3128 243 32 47 chr20 676304 676453 -65991552 + L1M4b LINE L1 2741 2891 -4066 2336 121 0 3 chr20 676453 676766 -65991239 + AluSx SINE Alu 1 312 0 3128 243 32 47 chr20 676766 677376 -65990629 + L1M4b LINE L1 2891 3509 -3448 2523 80 3 0 chr20 677376 677688 -65990317 + AluSp SINE Alu 1 313 0 3128 243 32 47 chr20 677688 677849 -65990156 + L1M4b LINE L1 3509 3671 -3286 2134 141 3 0 chr20 677849 678154 -65989851 - AluSx SINE Alu -4 308 3 3128 243 32 47 chr20 678154 678430 -65989575 + L1M4b LINE L1 3671 3852 -3105 2336 114 3 0 chr20 678431 678738 -65989267 + AluSx SINE Alu 1 308 -4 1258 117 11 0 chr20 678802 679010 -65988995 + AluY SINE Alu 119 311 0 1355 214 79 66 chr20 679012 679113 -65988892 + L1M4b LINE L1 3904 4002 -2955 2164 145 0 0 chr20 679113 679424 -65988581 + AluSx SINE Alu 1 311 -1 1355 214 79 66 chr20 679424 679626 -65988379 + L1M4b LINE L1 4002 4200 -2757 2225 125 0 3 chr20 679626 679938 -65988067 + AluY SINE Alu 1 311 0 1355 214 79 66 chr20 679938 680151 -65987854 + L1M4b LINE L1 4200 4428 -2529 822 220 53 62 chr20 680178 680526 -65987479 - MLT1H LTR MaLR -206 389 15 2125 115 62 42 chr20 680571 680885 -65987120 + THE1B LTR MaLR 1 325 -39 2106 108 7 0 chr20 680885 681217 -65986788 - AluSg SINE Alu 0 334 1 2125 115 62 42 chr20 681217 681258 -65986747 + THE1B LTR MaLR 325 364 0 232 238 0 32 chr20 681406 681469 -65986536 + MIR SINE MIR 161 221 -41 225 302 0 0 chr20 681517 681570 -65986435 + MIR SINE MIR 210 262 0 * 425 367 11 6 chr20 681526 681706 -65986299 - MIR SINE MIR -33 229 49 309 344 32 11 chr20 681777 681963 -65986042 + L1MC4a LINE L1 5696 5885 -1923 2296 107 7 13 chr20 682185 682600 -65985405 + AluSq SINE Alu 1 313 0 262 289 10 21 chr20 682614 682711 -65985294 - L1ME4a LINE L1 -96 6025 5930 1132 253 47 7 chr20 682718 683014 -65984991 - MLT1J LTR MaLR -193 318 11 1061 133 0 0 chr20 683124 683274 -65984731 - AluSg/x SINE Alu -23 287 138 1383 109 8 50 chr20 683274 683513 -65984492 - MER41B LTR ERV1 -277 358 130 1908 124 37 4 chr20 683954 684264 -65983741 + AluSx SINE Alu 1 319 0 4781 95 32 25 chr20 684639 684681 -65983324 + LTR8 LTR ERV1 2 42 -649 2309 84 14 7 chr20 684681 684978 -65983027 - AluSp SINE Alu -14 299 1 4781 95 32 25 chr20 684978 685620 -65982385 + LTR8 LTR ERV1 42 691 0 2315 114 3 0 chr20 685987 686284 -65981721 - AluSp SINE Alu -15 298 1 2153 144 0 10 chr20 686284 686589 -65981416 - AluJo SINE Alu -10 302 1 488 273 39 0 chr20 686771 686899 -65981106 - MIR SINE MIR -11 251 119 2969 158 74 31 chr20 687195 687653 -65980352 + MER67C LTR ERV1 1 497 -213 2184 124 14 0 chr20 687653 687944 -65980061 - AluSx SINE Alu -17 295 1 2969 158 74 31 chr20 687944 688132 -65979873 + MER67C LTR ERV1 497 675 -35 273 287 248 6 chr20 688159 688316 -65979689 + L1MC4a LINE L1 5741 5935 -1873 306 0 0 0 chr20 688384 688418 -65979587 + (TG)n Simple_repeat Simple_repeat 2 35 0 1920 155 3 10 chr20 688591 688888 -65979117 + AluSx SINE Alu 1 295 -17 1243 112 0 0 chr20 688888 689049 -65978956 + AluSg/x SINE Alu 132 292 -18 1989 138 24 14 chr20 689159 689455 -65978550 - AluSx SINE Alu -8 304 6 398 202 46 37 chr20 690018 690127 -65977878 - MIR SINE MIR -92 170 61 247 286 36 0 chr20 691466 691522 -65976483 + MIR SINE MIR 26 83 -179 764 266 68 8 chr20 692581 692818 -65975187 - MIR SINE MIR 0 262 12 317 346 76 11 chr20 693591 693776 -65974229 - MIR SINE MIR -52 210 14 1079 221 86 93 chr20 693992 694571 -65973434 + MER34C LTR ERV1 11 585 0 2055 128 14 0 chr20 695349 695645 -65972360 - AluSp SINE Alu -13 300 1 2152 75 78 8 chr20 695839 696207 -65971798 + LTR7 LTR ERV1 1 450 0 277 254 95 64 chr20 696207 696687 -65971318 + L1MC4a LINE L1 5260 5942 -1866 2234 108 3 0 chr20 696771 697066 -65970939 - AluY SINE Alu -15 296 1 748 246 48 22 chr20 697359 697587 -65970418 + MIR SINE MIR 29 262 0 260 329 162 9 chr20 698272 698488 -65969517 + L2 LINE L2 2933 3181 -91 636 233 135 10 chr20 698770 698963 -65969042 + MIR SINE MIR 32 248 -14 2325 109 0 0 chr20 699026 699330 -65968675 + AluSx SINE Alu 1 304 -8 726 226 113 95 chr20 699337 699463 -65968542 + MLT1J LTR MaLR 71 193 -318 2868 116 76 48 chr20 699463 699567 -65968438 - MER75 DNA T2_type 0 514 414 2077 123 3 7 chr20 699567 699869 -65968136 - AluSx SINE Alu -11 301 1 2868 116 76 48 chr20 699869 700264 -65967741 - MER75 DNA T2_type -100 414 1 726 226 113 95 chr20 700264 700527 -65967478 + MLT1J LTR MaLR 193 467 -44 1972 156 0 25 chr20 700549 700869 -65967136 + AluSx SINE Alu 1 312 0 181 161 0 97 chr20 701872 701934 -65966071 - L2 LINE L2 -301 2971 2916 209 196 0 0 chr20 701993 702039 -65965966 + T-rich Low_complexity Low_complexity 3 48 0 526 226 198 86 chr20 702059 702627 -65965378 - L2 LINE L2 0 3313 2616 687 224 88 43 chr20 702689 702885 -65965120 - MIR SINE MIR -32 230 30 232 264 61 74 chr20 703339 703487 -65964518 + L2 LINE L2 3077 3222 -91 241 277 8 46 chr20 703890 704020 -65963985 + GA-rich Low_complexity Low_complexity 2 126 0 248 294 61 49 chr20 704166 704329 -65963676 - MIR3 SINE MIR -37 171 7 * 299 298 24 0 chr20 704283 704367 -65963638 + MIR SINE MIR 58 143 -119 1924 155 3 19 chr20 704679 704989 -65963016 - AluJb SINE Alu -6 306 2 245 218 18 0 chr20 705734 705789 -65962216 + MIR SINE MIR 115 170 -92 649 279 53 0 chr20 705799 705989 -65962016 - MIR SINE MIR -2 260 61 2003 167 93 89 chr20 706023 706364 -65961641 - LTR8A LTR ERV1 0 727 381 2223 113 0 0 chr20 706364 706690 -65961315 + AluSx SINE Alu 1 326 0 2003 167 93 89 chr20 706690 706886 -65961119 - LTR8A LTR ERV1 -346 381 187 200 333 0 0 chr20 706956 707013 -65960992 + MIR SINE MIR 200 256 -6 1071 185 111 47 chr20 707181 707420 -65960585 + MER34C LTR ERV1 1 223 -493 2180 117 3 3 chr20 707420 707719 -65960286 - AluSq SINE Alu -8 305 7 1071 185 111 47 chr20 707719 707834 -65960171 + MER34C LTR ERV1 223 490 -226 428 210 92 8 chr20 707843 708017 -65959988 + LTR48 LTR ERV1 370 542 0 358 111 32 0 chr20 708039 708102 -65959903 + LTR24B LTR ERV1 8 72 -504 808 188 78 0 chr20 708135 708289 -65959716 - FRAM SINE Alu 0 166 1 1253 52 6 0 chr20 708291 708463 -65959542 + LTR19-int LTR ERV1 2085 2257 -3329 275 233 186 0 chr20 708463 708549 -65959456 - LTR8 LTR ERV1 -434 257 156 2989 55 30 30 chr20 708549 708750 -65959255 + LTR19A-int LTR ERV1 2346 2546 -3040 2151 105 14 3 chr20 708750 709046 -65958959 + AluSq SINE Alu 1 299 -14 2989 55 30 30 chr20 709046 709280 -65958725 + LTR19A-int LTR ERV1 2545 2781 -2805 * 10486 52 40 13 chr20 709278 709771 -65958234 - LTR19-int LTR ERV1 -1329 4257 3779 2357 91 3 10 chr20 709771 710079 -65957926 + AluSp SINE Alu 1 306 -7 10486 52 40 13 chr20 710079 710706 -65957299 - LTR19-int LTR ERV1 -1807 3779 3085 2236 96 7 7 chr20 710706 710999 -65957006 - AluY SINE Alu -18 293 1 10486 52 40 13 chr20 710999 711338 -65956667 - LTR19-int LTR ERV1 -2501 3085 2757 2170 107 4 0 chr20 711372 711653 -65956352 + AluSq SINE Alu 1 282 -31 8479 78 27 16 chr20 711662 712018 -65955987 + LTR19A-int LTR ERV1 4380 4731 -855 2260 121 3 7 chr20 712018 712325 -65955680 + AluSx SINE Alu 1 306 -6 8479 78 27 16 chr20 712325 713162 -65954843 + LTR19A-int LTR ERV1 4731 5586 0 3585 86 15 0 chr20 713162 713641 -65954364 + LTR19A LTR ERV1 1 486 0 3571 137 7 6 chr20 713662 714208 -65953797 - LTR10A LTR ERV1 -62 547 1 6843 182 23 21 chr20 714253 716649 -65951356 - LTR10A-int LTR ERV1 0 6649 4190 2161 69 0 0 chr20 716650 716924 -65951081 - AluSg SINE Alu -4 306 33 810 63 18 0 chr20 716924 717035 -65950970 - AluY SINE Alu -14 297 185 2430 253 54 12 chr20 717039 717633 -65950372 - HERVI LTR ERV1 -2456 5329 4711 * 5025 80 27 0 chr20 717600 718338 -65949667 - HERVI LTR ERV1 -4320 2576 1819 393 216 159 0 chr20 718343 718431 -65949574 + LTR8 LTR ERV1 156 257 -434 567 54 0 0 chr20 718431 718505 -65949500 - Harlequin LTR ERV1 -5178 1718 1645 * 1991 153 3 0 chr20 718504 718804 -65949201 - Harlequin LTR ERV1 -3205 4580 4280 249 204 102 46 chr20 718853 718961 -65949044 + LTR24B LTR ERV1 260 373 -203 2418 135 70 0 chr20 718961 719346 -65948659 - MER84 LTR ERVI 0 507 96 4953 99 34 57 chr20 719346 720143 -65947862 - MER4E LTR ERV1 0 779 1 1130 103 130 5 chr20 720143 720318 -65947687 + MER41B LTR ERV1 434 634 -1 513 66 66 13 chr20 720323 720399 -65947606 - MER84 LTR ERVI -427 80 1 1360 93 15 34 chr20 720456 720660 -65947345 + MER84 LTR ERVI 1 200 -307 1256 140 53 5 chr20 720661 720868 -65947137 + MER4E LTR ERV1 249 465 -314 817 106 0 0 chr20 720925 721029 -65946976 + MER84-int LTR ERV1 2030 2133 -2821 999 185 11 11 chr20 721029 721207 -65946798 + LTR1 LTR ERV1 1 178 -607 1823 167 149 46 chr20 721208 721705 -65946300 + LTR10A LTR ERV1 1 548 -61 772 226 88 33 chr20 721714 721988 -65946017 + LTR10A-int LTR ERV1 1 289 -6360 18573 219 11 28 chr20 722050 728562 -65939443 + LTR10A-int LTR ERV1 501 5708 -941 2250 74 0 35 chr20 728562 728872 -65939133 + AluY SINE Alu 1 299 -12 18573 219 11 28 chr20 728872 729799 -65938206 + LTR10A-int LTR ERV1 5708 6649 0 1850 188 77 70 chr20 729799 730343 -65937662 + LTR10A LTR ERV1 1 548 -61 371 127 0 0 chr20 730356 730411 -65937594 + LTR1 LTR ERV1 176 230 -555 764 170 17 21 chr20 730501 730796 -65937209 + LTR1B LTR ERV1 401 826 0 3961 124 23 20 chr20 730797 730980 -65937025 + MER4A-int LTR ERV1 2131 2312 -2642 1897 120 3 11 chr20 730980 731315 -65936690 + AluSx SINE Alu 1 333 0 3961 124 23 20 chr20 731315 731734 -65936271 + MER4A-int LTR ERV1 2312 2736 -2218 2159 112 0 0 chr20 731734 732030 -65935975 + AluSq SINE Alu 1 296 -17 17067 137 99 79 chr20 732139 732722 -65935283 + MER4A-int LTR ERV1 189 759 -5839 4668 122 19 59 chr20 732722 733011 -65934994 - MER4E LTR ERV1 0 779 480 1844 134 0 7 chr20 733011 733322 -65934683 - AluSx SINE Alu 0 309 1 4668 122 19 59 chr20 733322 733842 -65934163 - MER4E LTR ERV1 -299 480 2 17067 137 99 79 chr20 733842 734050 -65933955 + MER4A-int LTR ERV1 759 961 -5637 1201 170 14 0 chr20 734050 734262 -65933743 - AluSg/x SINE Alu -13 299 85 17067 137 99 79 chr20 734262 736638 -65931367 + MER4A-int LTR ERV1 961 3288 -3310 1997 120 3 0 chr20 736638 736944 -65931061 - AluSx SINE Alu 0 307 1 17067 137 99 79 chr20 736944 736962 -65931043 + MER4A-int LTR ERV1 3288 3304 -3294 2000 116 0 52 chr20 736962 737290 -65930715 - AluSx SINE Alu -1 311 1 17067 137 99 79 chr20 737290 737949 -65930056 + MER4A-int LTR ERV1 3304 3948 -2650 189 0 0 0 chr20 737949 737970 -65930035 + (TTA)n Simple_repeat Simple_repeat 1 21 0 17067 137 99 79 chr20 737970 739226 -65928779 + MER4A-int LTR ERV1 3948 6598 0 3154 130 121 47 chr20 739227 739846 -65928159 + MER4A LTR ERV1 1 465 0 2368 138 0 22 chr20 739846 740145 -65927860 + MER84 LTR ERVI 146 437 -70 2158 125 3 0 chr20 740145 740450 -65927555 - AluSq SINE Alu -6 307 2 2368 138 0 22 chr20 740450 740520 -65927485 + MER84 LTR ERVI 437 507 0 181 238 0 0 chr20 740688 740730 -65927275 - L3b LINE CR1 -198 1385 1344 212 145 0 48 chr20 740771 740806 -65927199 + (TTTAA)n Simple_repeat Simple_repeat 1 33 -26 2115 116 0 0 chr20 740806 741100 -65926905 - AluSq SINE Alu -19 294 1 212 145 0 48 chr20 741100 741126 -65926879 + (TTTAA)n Simple_repeat Simple_repeat 33 59 0 3784 177 39 58 chr20 741258 742231 -65925774 - LTR5 LTR ERVK -14 955 1 2090 132 3 0 chr20 742243 742554 -65925451 - AluSx SINE Alu 0 312 1 4032 134 3 23 chr20 742610 743258 -65924747 + MER41B LTR ERV1 1 635 0 231 369 18 18 chr20 743300 743411 -65924594 + L2 LINE L2 2941 3051 -221 2268 106 0 0 chr20 743552 743864 -65924141 - AluSp SINE Alu -1 312 1 1551 182 0 24 chr20 743916 744238 -65923767 - AluSx SINE Alu 0 315 1 636 232 55 76 chr20 744400 744689 -65923316 - L2 LINE L2 0 3313 3031 249 264 98 52 chr20 744836 744928 -65923077 - L1MC/D LINE L1 -2003 5805 5719 1903 125 14 0 chr20 744928 745225 -65922780 + AluSx SINE Alu 1 301 -11 249 264 98 52 chr20 745225 745306 -65922699 - L1MC/D LINE L1 -2089 5719 5624 287 218 117 5 chr20 745946 746055 -65921950 + AluJ/monomer SINE Alu 1 51 -257 324 48 0 0 chr20 746134 746176 -65921829 + (TG)n Simple_repeat Simple_repeat 1 42 0 1814 84 0 0 chr20 746176 746414 -65921591 - AluSg SINE Alu -33 277 40 1722 82 0 41 chr20 746610 746855 -65921150 - AluSq SINE Alu -78 235 1 222 86 0 0 chr20 746947 746977 -65921028 + (A)n Simple_repeat Simple_repeat 1 31 0 2121 123 0 0 chr20 746977 747287 -65920718 + AluSg SINE Alu 1 310 0 457 340 39 0 chr20 747308 747464 -65920541 + L3 LINE CR1 967 1128 -449 2169 60 39 0 chr20 747899 748183 -65919822 - AluSp SINE Alu -14 299 5 1894 55 65 31 chr20 748200 748492 -65919513 - AluY SINE Alu -9 302 1 742 190 17 0 chr20 748649 748823 -65919182 + CT-rich Low_complexity Low_complexity 4 180 0 1899 76 8 4 chr20 748828 749079 -65918926 - AluSx SINE Alu -23 289 38 187 228 139 0 chr20 749136 749237 -65918768 - L2 LINE L2 -814 2500 2386 619 138 36 7 chr20 749845 749983 -65918022 + CT-rich Low_complexity Low_complexity 3 144 0 1839 164 3 3 chr20 749985 750297 -65917708 - AluJb SINE Alu 0 312 1 334 267 176 6 chr20 750331 750507 -65917498 - L1MC4 LINE L1 -8 8034 7829 330 272 215 21 chr20 750590 750869 -65917136 + MER113 DNA MER1_type? 126 458 -63 685 303 56 19 chr20 751201 751468 -65916537 + L2 LINE L2 2994 3270 -2 2449 65 0 7 chr20 751564 751871 -65916134 - AluSq SINE Alu -8 305 1 532 266 89 87 chr20 751871 752310 -65915695 - L2 LINE L2 -3 3269 2830 220 279 25 0 chr20 753052 753131 -65914874 + MIR SINE MIR 67 147 -61 549 237 18 18 chr20 753186 753355 -65914650 + MER113 DNA MER1_type? 81 249 -272 1041 212 108 7 chr20 753358 753627 -65914378 + L1ME1 LINE L1 5871 6166 0 2083 115 10 10 chr20 753710 754022 -65913983 + AluSx SINE Alu 1 312 0 825 233 11 5 chr20 754073 754273 -65913732 + MLT1A2 LTR MaLR 188 389 -1 2042 132 0 19 chr20 754681 754992 -65913013 - AluSx SINE Alu -7 305 1 398 241 28 0 chr20 755043 755151 -65912854 + MER103 DNA DNA 2 112 -54 619 256 38 76 chr20 755294 755532 -65912473 - L2 LINE L2 -250 3063 2835 294 264 11 44 chr20 755711 755739 -65912266 - MIR SINE MIR -80 182 155 2271 120 22 27 chr20 755739 756105 -65911900 + THE1B LTR MaLR 1 364 0 294 264 11 44 chr20 756105 756167 -65911838 - MIR SINE MIR -107 155 95 225 98 0 73 chr20 756248 756289 -65911716 - MER5B DNA MER1_type -3 175 138 1002 208 162 8 chr20 756289 756611 -65911394 + MLT1F LTR MaLR 2 415 -127 1463 125 30 106 chr20 756715 757044 -65910961 + AluYb8 SINE Alu 1 304 -14 2168 81 37 0 chr20 757193 757490 -65910515 + AluSp SINE Alu 1 308 -5 1586 171 27 10 chr20 757499 757797 -65910208 + AluJb SINE Alu 1 303 -9 2204 107 0 0 chr20 757993 758293 -65909712 - AluSq SINE Alu -13 300 1 1725 221 119 26 chr20 759151 759613 -65908392 + MER69 DNA AcHobo 77 581 -645 560 196 214 0 chr20 759595 759673 -65908332 + MER69 DNA AcHobo 2279 2339 -187 * 1712 135 3 45 chr20 759673 759848 -65908157 - AluJo SINE Alu -3 309 151 2024 138 6 3 chr20 759848 760159 -65907846 - AluSx SINE Alu 0 312 1 1712 135 3 45 chr20 760159 760295 -65907710 - AluJo SINE Alu -161 151 11 560 196 214 0 chr20 760295 760384 -65907621 + MER69 DNA AcHobo 2339 2482 -44 2265 103 3 3 chr20 760385 760696 -65907309 + AluSq SINE Alu 1 311 -2 359 308 37 0 chr20 760856 760963 -65907042 + MIR SINE MIR 118 228 -34 1249 182 121 4 chr20 761467 761731 -65906274 + AluJo SINE Alu 5 299 -13 1889 131 28 0 chr20 761788 762078 -65905927 - AluSx SINE Alu -12 300 3 1904 161 3 0 chr20 762136 762447 -65905558 + AluJo SINE Alu 1 312 0 370 242 167 0 chr20 762583 762715 -65905290 - L1ME LINE L1 -347 5774 5621 263 279 0 0 chr20 762762 762830 -65905175 - MIR SINE MIR -92 116 49 257 119 24 0 chr20 763458 763500 -65904505 - MIR SINE MIR -64 144 102 271 325 75 8 chr20 764044 764164 -65903841 - MIR SINE MIR -101 161 34 270 147 250 0 chr20 764423 764491 -65903514 + MER96B DNA MER1_type? 1 85 -332 333 0 0 0 chr20 764575 764612 -65903393 + (TC)n Simple_repeat Simple_repeat 2 38 0 248 202 0 64 chr20 764612 764721 -65903284 - L1MC4 LINE L1 -1339 6703 6602 201 241 19 0 chr20 764728 764782 -65903223 + MIR SINE MIR 65 119 -89 646 244 127 27 chr20 765435 765656 -65902349 - MIR SINE MIR 0 262 20 3574 126 23 33 chr20 765690 766444 -65901561 - L1MB3 LINE L1 -15 6168 5333 2160 98 3 7 chr20 766453 766760 -65901245 - AluSg1 SINE Alu -3 306 1 479 293 75 0 chr20 766945 767078 -65900927 - MIR SINE MIR -97 165 23 193 300 0 0 chr20 767092 767152 -65900853 - L2 LINE L2 -280 2992 2933 865 219 25 15 chr20 767331 767459 -65900546 + L1MC4 LINE L1 7282 7414 -628 814 204 59 0 chr20 767459 767611 -65900394 + FRAM SINE Alu 4 164 -2 865 219 25 15 chr20 767611 767683 -65900322 + L1MC4 LINE L1 7414 7484 -558 239 79 26 0 chr20 767689 767727 -65900278 + (TTTC)n Simple_repeat Simple_repeat 3 41 0 531 249 175 46 chr20 767877 768227 -65899778 - L2 LINE L2 -107 3165 2776 616 95 0 0 chr20 768228 768312 -65899693 - AluY SINE Alu -10 301 218 238 219 0 24 chr20 768393 768467 -65899538 - MIR SINE MIR -61 147 89 977 200 24 5 chr20 768598 768808 -65899197 + MIR SINE MIR 46 259 -3 512 195 27 47 chr20 770203 770352 -65897653 + MIR SINE MIR 85 230 -32 341 330 23 29 chr20 771443 771616 -65896389 - MIR SINE MIR -29 233 62 21 0 0 0 chr20 771618 771639 -65896366 + GC_rich Low_complexity Low_complexity 1 21 0 335 249 42 132 chr20 772303 772568 -65895437 - L2 LINE L2 -5 3308 3068 238 202 108 0 chr20 772582 772648 -65895357 + MIR SINE MIR 72 144 -64 1013 207 5 19 chr20 772757 772965 -65895040 + MER3 DNA MER1_type 5 209 0 374 264 11 0 chr20 773669 773760 -65894245 + MIR SINE MIR 69 160 -102 203 160 13 80 chr20 774682 774757 -65893248 + (CCCCG)n Simple_repeat Simple_repeat 3 72 0 181 200 67 0 chr20 776171 776216 -65891789 + MIR SINE MIR 78 125 -83 224 200 150 80 chr20 777377 777477 -65890528 - L2 LINE L2 -61 3252 3146 183 342 72 18 chr20 778002 778113 -65889892 + MIR SINE MIR 34 150 -58 2088 125 0 0 chr20 778387 778684 -65889321 + AluSx SINE Alu 1 297 -15 753 123 25 16 chr20 778708 778830 -65889175 + L1PA8 LINE L1 6050 6172 0 351 268 79 8 chr20 778878 779011 -65888994 - L1MC4 LINE L1 -1 8041 7783 566 258 50 13 chr20 779158 779317 -65888688 - L1ME2 LINE L1 -13 6151 5987 542 159 62 41 chr20 779357 779502 -65888503 - HAL1 LINE L1 -71 2436 2289 375 23 0 0 chr20 779502 779546 -65888459 + (CA)n Simple_repeat Simple_repeat 1 44 0 2090 128 0 0 chr20 779552 779848 -65888157 - AluSx SINE Alu -16 296 1 790 265 50 14 chr20 779888 780107 -65887898 + MIR SINE MIR 18 244 -18 509 243 37 28 chr20 780148 780366 -65887639 - HAL1 LINE L1 -295 2212 1993 275 276 92 20 chr20 780510 780608 -65887397 - L2 LINE L2 -12 3301 3197 721 268 104 0 chr20 780945 781165 -65886840 - MIR SINE MIR -19 243 1 259 276 0 40 chr20 781280 781356 -65886649 - L2 LINE L2 0 3272 3200 195 42 0 0 chr20 781463 781487 -65886518 + (TG)n Simple_repeat Simple_repeat 1 24 0 526 273 166 49 chr20 781607 782017 -65885988 - MLT1H LTR MaLR 0 549 92 1940 108 4 0 chr20 782064 782333 -65885672 - AluSg SINE Alu -40 270 1 258 275 14 0 chr20 782348 782417 -65885588 - MLT1H LTR MaLR -476 73 4 283 313 78 23 chr20 782456 782584 -65885421 + MIR3 SINE MIR 34 168 -40 572 308 106 46 chr20 782618 782985 -65885020 - L2 LINE L2 -11 3261 2873 964 264 91 35 chr20 783061 783580 -65884425 + L2 LINE L2 2763 3313 0 186 246 49 49 chr20 783594 783655 -65884350 + MIR3 SINE MIR 7 67 -141 224 273 30 0 chr20 784137 784203 -65883802 - MIR SINE MIR -66 142 75 321 47 0 0 chr20 784251 784294 -65883711 + (TG)n Simple_repeat Simple_repeat 1 43 0 302 197 84 14 chr20 784354 784425 -65883580 + MIR SINE MIR 12 87 -175 2048 112 3 0 chr20 784548 784835 -65883170 + AluSg SINE Alu 1 288 -22 309 336 121 27 chr20 785384 785607 -65882398 + L1MC4a LINE L1 5690 5933 -1875 720 179 163 5 chr20 786231 786421 -65881584 - L2 LINE L2 0 3313 3094 1964 238 74 24 chr20 786441 786983 -65881022 - L1ME1 LINE L1 -1 6165 5597 939 251 128 46 chr20 787002 787264 -65880741 - L2 LINE L2 -244 3069 2830 1788 143 28 0 chr20 787264 787550 -65880455 - AluSx SINE Alu -18 294 1 939 251 128 46 chr20 787550 787855 -65880150 - L2 LINE L2 -483 2830 2456 1470 209 27 3 chr20 787864 788165 -65879840 + MLT1E3 LTR MaLR 316 623 -1 398 267 9 0 chr20 788173 788278 -65879727 - MIR3 SINE MIR -6 202 97 410 309 112 0 chr20 788586 788738 -65879267 + MIR SINE MIR 46 214 -48 201 261 54 33 chr20 788769 788861 -65879144 + MIR3 SINE MIR 104 197 -11 608 221 0 8 chr20 788861 788983 -65879022 + MIR SINE MIR 50 170 -92 266 188 206 31 chr20 789870 789967 -65878038 + MIR SINE MIR 4 116 -92 272 372 35 0 chr20 789988 790101 -65877904 - MIR SINE MIR -62 146 30 302 244 35 12 chr20 790266 790352 -65877653 - MIR SINE MIR -76 132 45 644 221 10 72 chr20 790558 790753 -65877252 - MIR SINE MIR -3 259 77 413 310 25 19 chr20 791088 791246 -65876759 + MIR SINE MIR 2 160 -102 608 283 97 77 chr20 791249 791702 -65876303 + MLT1J LTR MaLR 9 470 -41 2587 142 49 85 chr20 791702 791792 -65876213 - L1MC3 LINE L1 -28 7757 7665 1633 178 6 29 chr20 791792 792107 -65875898 + AluJo SINE Alu 1 308 -4 2587 142 49 85 chr20 792107 792607 -65875398 - L1MC3 LINE L1 -120 7665 7188 299 247 78 0 chr20 792609 792686 -65875319 - MLT1F1 LTR MaLR -440 127 45 1897 160 0 0 chr20 792927 793220 -65874785 + AluJb SINE Alu 1 293 -19 35 41 0 0 chr20 793225 793274 -65874731 + AT_rich Low_complexity Low_complexity 1 49 0 2816 211 30 13 chr20 793387 793990 -65874015 - MER90 LTR ERV1 -1 613 1 215 239 60 0 chr20 794295 794362 -65873643 - MIR3 SINE MIR -53 155 85 284 250 40 0 chr20 794860 794936 -65873069 + MIR SINE MIR 65 143 -119 283 238 38 0 chr20 794991 795071 -65872934 - MLT1L LTR MaLR 0 615 533 2115 141 0 0 chr20 795258 795570 -65872435 - AluSx SINE Alu 0 312 1 249 257 57 0 chr20 796369 796439 -65871566 - MIR SINE MIR 0 262 189 870 205 118 0 chr20 796574 796803 -65871202 + Charlie4a DNA MER1_type 100 355 -153 426 39 0 0 chr20 796829 796881 -65871124 + (TG)n Simple_repeat Simple_repeat 1 52 0 559 186 0 0 chr20 796881 796967 -65871038 - FLAM_A SINE Alu -30 112 27 2292 62 0 10 chr20 797002 797292 -65870713 - AluY SINE Alu -24 287 1 633 154 15 44 chr20 797293 797429 -65870576 + Charlie4a DNA MER1_type 363 494 -14 411 221 66 41 chr20 797432 797554 -65870451 - MIR SINE MIR -68 194 70 185 300 0 0 chr20 798300 798350 -65869655 + MIR SINE MIR 81 130 -78 1993 142 3 3 chr20 798355 798665 -65869340 - AluSx SINE Alu 0 312 3 963 306 146 3 chr20 799200 799563 -65868442 + MLT1K LTR MaLR 108 522 -66 2057 121 7 0 chr20 799657 799954 -65868051 + AluSx SINE Alu 1 299 -13 569 279 73 45 chr20 800239 800486 -65867519 - MIR SINE MIR -7 255 2 465 275 8 8 chr20 801476 801607 -65866398 - MER103 DNA DNA -12 154 24 201 111 56 0 chr20 802657 802693 -65865312 + G-rich Low_complexity Low_complexity 4 41 0 236 311 13 20 chr20 802881 803032 -65864973 + (TCTCTG)n Simple_repeat Simple_repeat 2 151 0 214 133 0 133 chr20 803177 803260 -65864745 + (TCTCTG)n Simple_repeat Simple_repeat 3 74 0 1746 167 3 23 chr20 804130 804429 -65863576 - AluJb SINE Alu -18 294 2 444 265 124 49 chr20 804476 804661 -65863344 - MIR SINE MIR -44 218 20 615 276 55 55 chr20 804876 805130 -65862875 + MIR SINE MIR 9 262 0 1951 122 3 50 chr20 805258 805579 -65862426 + AluJb SINE Alu 1 306 -6 578 286 93 6 chr20 805921 806103 -65861902 - MIR SINE MIR -14 248 51 1310 142 0 43 chr20 806261 806472 -65861533 + AluJb SINE Alu 87 288 -24 248 305 183 0 chr20 806602 806733 -65861272 + L3 LINE CR1 1419 1573 -4 551 227 188 0 chr20 806840 807016 -65860989 + MIR SINE MIR 48 256 -6 295 369 38 19 chr20 807070 807230 -65860775 - MIR3 SINE MIR -35 173 11 777 240 104 5 chr20 807970 808191 -65859814 + L1ME3 LINE L1 5918 6160 -2 29 70 0 0 chr20 808885 808942 -65859063 + AT_rich Low_complexity Low_complexity 1 57 0 198 270 84 25 chr20 809381 809494 -65858511 + MIR SINE MIR 33 147 -62 390 167 313 0 chr20 809500 809596 -65858409 + MIR SINE MIR 103 228 -34 1678 140 4 11 chr20 809738 810009 -65857996 + AluJo SINE Alu 25 293 -19 786 284 53 25 chr20 810044 810329 -65857676 + MLT1J1 LTR MaLR 153 445 -1 186 237 0 51 chr20 810769 810828 -65857177 - L2 LINE L2 -30 3242 3187 455 264 35 65 chr20 810830 811061 -65856944 - L2 LINE L2 -222 3050 2827 349 185 37 0 chr20 811335 811416 -65856589 - MIR SINE MIR -60 148 65 180 179 0 0 chr20 812197 812236 -65855769 + (CAA)n Simple_repeat Simple_repeat 3 41 0 651 254 42 69 chr20 812427 812644 -65855361 - MIR SINE MIR -32 230 20 537 220 42 8 chr20 813763 813881 -65854124 + L2 LINE L2 3149 3270 -2 263 240 10 94 chr20 814056 814152 -65853853 - MIR3 SINE MIR -30 178 91 249 259 0 12 chr20 814234 814315 -65853690 - MIR SINE MIR -75 133 54 306 339 83 39 chr20 814968 815222 -65852783 + L1ME LINE L1 5572 5836 -285 624 294 60 27 chr20 815577 815906 -65852099 + L1MC4a LINE L1 5612 5956 -1852 2080 173 3 0 chr20 815906 816271 -65851734 - MER47A DNA MER2_type 0 366 1 624 294 60 27 chr20 816271 816308 -65851697 + L1MC4a LINE L1 5956 5990 -1818 561 221 8 8 chr20 816318 816440 -65851565 + L2 LINE L2 3192 3313 0 21 36 0 0 chr20 817047 817075 -65850930 + AT_rich Low_complexity Low_complexity 1 28 0 273 125 0 0 chr20 817227 817275 -65850730 + L1MB8 LINE L1 6129 6176 -2 247 64 21 43 chr20 817290 817337 -65850668 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 210 352 9 37 chr20 817422 817530 -65850475 + (CCCCAG)n Simple_repeat Simple_repeat 2 106 0 392 307 6 24 chr20 817540 817706 -65850299 + (CCCTAG)n Simple_repeat Simple_repeat 2 164 0 835 249 194 31 chr20 818017 818670 -65849335 + L2 LINE L2 2378 3178 -135 1756 198 21 0 chr20 818670 819009 -65848996 - MER7A DNA MER2_type 0 346 3 835 249 194 31 chr20 819009 819126 -65848879 + L2 LINE L2 3178 3275 -38 184 233 107 107 chr20 819289 819392 -65848613 + L2 LINE L2 3172 3274 -39 * 201 349 72 46 chr20 819369 819564 -65848441 - L2 LINE L2 -39 3233 3034 698 263 86 74 chr20 819904 820323 -65847682 + L2 LINE L2 2579 2991 -322 643 276 28 37 chr20 820326 820543 -65847462 + L2 LINE L2 3099 3313 0 265 265 36 24 chr20 820696 820779 -65847226 + MIR3 SINE MIR 119 202 -6 576 225 95 12 chr20 821255 821424 -65846581 + MER5A DNA MER1_type 3 185 -4 2107 138 3 0 chr20 821724 822020 -65845985 + AluJb SINE Alu 1 297 -15 680 168 61 0 chr20 822111 822242 -65845763 - FRAM SINE Alu -38 138 1 241 281 245 0 chr20 822307 822503 -65845502 + L2 LINE L2 1940 2183 -1131 967 228 109 16 chr20 822503 822911 -65845094 + Charlie4a DNA MER1_type 1 476 -32 353 294 112 61 chr20 823002 823298 -65844707 + L2 LINE L2 2244 2554 -760 2407 52 28 31 chr20 823401 823728 -65844277 - LTR17 LTR ERV1 -454 326 1 1607 71 5 0 chr20 823730 823941 -65844064 - HERV17 LTR ERV1 -3 8623 8412 220 186 129 43 chr20 824139 824209 -65843796 - MIR3 SINE MIR -47 161 86 243 310 23 0 chr20 824788 824875 -65843130 + MIR SINE MIR 47 135 -127 1422 253 75 10 chr20 825078 825477 -65842528 + L1ME1 LINE L1 5740 6164 -2 738 309 163 3 chr20 825585 825948 -65842057 - L2 LINE L2 -5 3308 2888 351 247 93 16 chr20 826052 826211 -65841794 + MIR SINE MIR 17 185 -62 1605 120 110 6 chr20 826287 826640 -65841365 + LTR7 LTR ERV1 1 450 0 1114 211 14 12 chr20 826640 827048 -65840957 + HERVH LTR ERV1 1 446 -7267 8945 141 10 39 chr20 827135 828662 -65839343 + HERVH LTR ERV1 808 2288 -5425 2435 66 0 20 chr20 828662 828963 -65839042 - AluY SINE Alu -16 295 1 8945 141 10 39 chr20 828963 829042 -65838963 + HERVH LTR ERV1 2288 2368 -5345 2064 119 0 12 chr20 829042 829369 -65838636 + HERVH LTR ERV1 2697 3019 -4694 1220 128 0 0 chr20 829358 829553 -65838452 + HERVH LTR ERV1 4335 4529 -3184 * 3289 88 7 0 chr20 829553 830010 -65837995 + HERVH LTR ERV1 6489 6948 -765 3330 107 5 59 chr20 830064 830636 -65837369 + HERVH LTR ERV1 7173 7713 0 2027 102 47 6 chr20 830636 831010 -65836995 + LTR7 LTR ERV1 1 450 0 1807 179 10 7 chr20 831041 831349 -65836656 + AluJb SINE Alu 1 309 -3 1638 254 37 22 chr20 831706 832194 -65835811 + Charlie4a DNA MER1_type 14 508 0 180 298 0 0 chr20 832228 832275 -65835730 + L2 LINE L2 3145 3191 -81 234 273 83 19 chr20 832304 832423 -65835582 - MIR SINE MIR -69 139 38 683 287 93 20 chr20 832665 833020 -65834985 + L2 LINE L2 2410 2790 -524 297 264 73 27 chr20 833316 833426 -65834579 - MIR3 SINE MIR -32 176 62 525 354 29 26 chr20 833742 834033 -65833972 - L1MC4a LINE L1 -1910 5898 5604 1686 144 0 36 chr20 834033 834310 -65833695 - AluJo SINE Alu -8 304 38 525 354 29 26 chr20 834310 834363 -65833642 - L1MC4a LINE L1 -2204 5604 5553 647 295 118 14 chr20 834505 834793 -65833212 + L2 LINE L2 2996 3313 0 211 283 120 0 chr20 835113 835205 -65832800 - L2 LINE L2 -1 3312 3210 510 276 205 0 chr20 835241 835426 -65832579 - MIR SINE MIR -27 235 13 2037 223 61 21 chr20 835438 835959 -65832046 + MLT1F LTR MaLR 1 542 0 251 185 148 56 chr20 836535 836643 -65831362 + L2 LINE L2 3188 3305 -8 546 229 127 13 chr20 836949 837106 -65830899 - MIR SINE MIR -9 253 79 525 358 63 36 chr20 837664 838111 -65829894 + L2 LINE L2 2812 3270 -2 312 305 29 0 chr20 838321 838426 -65829579 + MIR SINE MIR 33 140 -68 636 256 128 0 chr20 838449 838652 -65829353 + MIR SINE MIR 9 237 -25 320 276 114 0 chr20 838766 838871 -65829134 - MIR SINE MIR -72 190 74 811 316 9 0 chr20 838969 839197 -65828808 - MIR SINE MIR -11 251 22 769 254 94 5 chr20 839514 839727 -65828278 + MIR SINE MIR 19 250 -12 200 250 18 45 chr20 840967 841079 -65826926 + (CAGAGA)n Simple_repeat Simple_repeat 3 111 0 849 194 0 0 chr20 841085 841224 -65826781 + FRAM SINE Alu 7 145 -31 504 156 0 0 chr20 841228 841337 -65826668 + GA-rich Low_complexity Low_complexity 1 109 0 361 267 33 8 chr20 842005 842125 -65825880 + GA-rich Low_complexity Low_complexity 5 127 0 281 210 48 97 chr20 842291 842415 -65825590 + MIR3 SINE MIR 37 154 -54 201 121 0 0 chr20 842536 842569 -65825436 + (ATG)n Simple_repeat Simple_repeat 1 33 0 660 304 113 12 chr20 843508 843834 -65824171 - L2 LINE L2 0 3313 2955 215 297 115 11 chr20 843833 844015 -65823990 - L2 LINE L2 -526 2788 2588 * 860 283 121 42 chr20 844316 845112 -65822893 + L2 LINE L2 2437 3312 -1 255 239 0 0 chr20 846010 846098 -65821907 + (CA)n Simple_repeat Simple_repeat 1 88 0 209 373 32 0 chr20 846591 846717 -65821288 + MIR SINE MIR 16 145 -63 757 209 158 0 chr20 846785 846962 -65821043 + MIR SINE MIR 48 252 -10 682 252 7 0 chr20 847562 847709 -65820296 + MER45A DNA AcHobo 31 178 0 407 332 146 5 chr20 847830 848035 -65819970 + MIR SINE MIR 28 261 -1 1728 196 25 3 chr20 848045 848402 -65819603 + MLT1A1 LTR MaLR 1 365 0 300 111 0 0 chr20 848509 848554 -65819451 + (TTCC)n Simple_repeat Simple_repeat 2 46 0 2127 143 7 0 chr20 848559 848866 -65819139 - AluSx SINE Alu -3 309 1 211 288 157 65 chr20 848866 849019 -65818986 + L2 LINE L2 2687 2853 -461 1016 298 99 47 chr20 849640 850134 -65817871 - MLT1K LTR MaLR -45 543 24 278 144 45 117 chr20 850201 850312 -65817693 - MIR3 SINE MIR -21 187 85 219 149 0 0 chr20 850979 851019 -65816986 + MIR SINE MIR 115 153 -109 1365 262 139 43 chr20 851050 851553 -65816452 - MLT1G1 LTR MaLR -2 593 32 2104 130 0 0 chr20 851553 851887 -65816118 - AluSx SINE Alu 0 334 1 1365 262 139 43 chr20 851887 851921 -65816084 - MLT1G1 LTR MaLR -563 32 3 391 292 25 40 chr20 852543 852745 -65815260 - L1ME4a LINE L1 -1 6120 5922 888 118 0 0 chr20 852841 852968 -65815037 + FLAM_C SINE Alu 2 128 -5 2143 133 3 0 chr20 853005 853305 -65814700 + AluSx SINE Alu 1 301 -11 285 318 76 47 chr20 853630 854158 -65813847 - L1ME4a LINE L1 -202 5919 5379 1053 216 206 64 chr20 854172 854653 -65813352 + MLT1H LTR MaLR 1 549 0 399 275 107 0 chr20 854669 854800 -65813205 + MIR SINE MIR 59 203 -59 1911 145 22 19 chr20 855049 855360 -65812645 + AluSx SINE Alu 1 312 0 2905 195 20 4 chr20 855361 855899 -65812106 - MER41D LTR ERV1 -10 547 1 338 167 33 89 chr20 855902 855992 -65812013 - MER41D-int LTR ERV1 -10 7195 7111 2726 294 29 23 chr20 856132 856906 -65811099 - MER41D-int LTR ERV1 -260 7496 6714 5112 98 17 22 chr20 856906 857689 -65810316 - MER4E LTR ERV1 0 779 1 2726 294 29 23 chr20 857689 857838 -65810167 - MER41D-int LTR ERV1 -1042 6714 6567 971 283 16 35 chr20 857954 858321 -65809684 - MER41D-int LTR ERV1 -1401 6355 5996 607 124 72 0 chr20 858325 858422 -65809583 - MER49 LTR ERV1 -204 719 616 * 1048 190 27 81 chr20 858415 858710 -65809295 - MER49 LTR ERV1 -642 281 3 1555 163 38 7 chr20 858721 859083 -65808922 - MER41D-int LTR ERV1 -23 6735 6363 507 179 219 0 chr20 859072 859195 -65808810 - MER41D-int LTR ERV1 -625 6133 5984 * 735 159 0 138 chr20 859401 859515 -65808490 - MER41D-int LTR ERV1 -4167 3953 3875 1978 162 0 14 chr20 859515 859812 -65808193 - AluSx SINE Alu -18 294 2 735 159 0 138 chr20 859812 859892 -65808113 - MER41D-int LTR ERV1 -4245 3875 3786 2656 155 51 88 chr20 860074 861344 -65806661 - MER41D-int LTR ERV1 -2148 4183 1720 800 162 8 1 chr20 861842 861984 -65806021 - MER41D-int LTR ERV1 -3015 3661 1506 378 125 0 16 chr20 861974 862038 -65805967 - MER41D-int LTR ERV1 -568 1218 1156 * 25 65 0 0 chr20 862038 862084 -65805921 + AT_rich Low_complexity Low_complexity 1 46 0 2002 166 0 3 chr20 862088 862401 -65805604 + AluJo SINE Alu 1 312 0 1173 169 4 30 chr20 862411 862647 -65805358 - LTR57-int LTR ERVL -4658 685 456 313 176 67 28 chr20 863006 863107 -65804898 - MER41D-int LTR ERV1 -5851 95 1 2855 197 16 2 chr20 863107 863656 -65804349 - MER41D LTR ERV1 0 557 1 293 236 16 110 chr20 864300 864427 -65803578 + MIR SINE MIR 112 226 -36 184 323 0 15 chr20 864559 864624 -65803381 - MIR SINE MIR -63 145 82 451 286 82 15 chr20 864772 864978 -65803027 + MIR SINE MIR 28 247 -15 921 280 89 32 chr20 865232 865481 -65802524 + L2 LINE L2 2922 3200 -113 1745 193 22 16 chr20 865481 865551 -65802454 - MLT1A1 LTR MaLR 0 365 297 1968 123 41 10 chr20 865551 865844 -65802161 + AluSx SINE Alu 1 302 -10 1745 193 22 16 chr20 865844 866136 -65801869 - MLT1A1 LTR MaLR -68 297 1 921 280 89 32 chr20 866136 866257 -65801748 + L2 LINE L2 3200 3313 0 270 237 0 0 chr20 866278 866337 -65801668 - L2 LINE L2 -14 3258 3200 595 165 0 0 chr20 866435 866544 -65801461 + MSTA LTR MaLR 1 109 -319 364 227 114 8 chr20 866552 866684 -65801321 + L1M4 LINE L1 3804 3949 -2197 4980 58 0 0 chr20 866684 867322 -65800683 - L1PA7 LINE L1 -4 6150 5513 1941 148 34 0 chr20 867322 867646 -65800359 + MSTA LTR MaLR 94 428 0 362 298 69 23 chr20 867774 867905 -65800100 - MIR3 SINE MIR -63 145 9 313 242 88 0 chr20 868009 868100 -65799905 - MLT1K LTR MaLR -81 507 409 544 270 130 36 chr20 868269 868644 -65799361 + MLT1J LTR MaLR 59 511 0 226 269 39 39 chr20 869107 869211 -65798794 + MIR SINE MIR 24 127 -135 379 283 41 62 chr20 869407 869714 -65798291 + MLT1J2 LTR MaLR 31 408 -38 274 303 42 49 chr20 869996 870138 -65797867 - MIR SINE MIR -8 254 114 876 260 70 57 chr20 870226 870683 -65797322 - L2 LINE L2 -31 3282 2820 204 200 0 0 chr20 870859 870904 -65797101 + CT-rich Low_complexity Low_complexity 1 45 0 1037 240 80 96 chr20 871033 871241 -65796764 - MER41C LTR ERV1 -9 545 335 1946 135 17 3 chr20 871241 871529 -65796476 + AluJb SINE Alu 14 305 -7 1037 240 80 96 chr20 871529 871658 -65796347 - MER41C LTR ERV1 -219 335 205 2279 94 0 7 chr20 871658 871977 -65796028 - AluY SINE Alu 0 311 1 1037 240 80 96 chr20 871977 872189 -65795816 - MER41C LTR ERV1 -349 205 4 290 274 77 0 chr20 872192 872309 -65795696 + MIR3 SINE MIR 33 158 -50 * 479 264 74 0 chr20 872305 872426 -65795579 + MIR SINE MIR 61 190 -72 1428 145 137 24 chr20 872533 872788 -65795217 + AluJb SINE Alu 1 284 -28 4970 117 50 25 chr20 872788 873440 -65794565 - MER4D LTR ERV1 -38 865 186 2001 101 59 7 chr20 873440 873728 -65794277 - AluSx SINE Alu -9 303 1 4970 117 50 25 chr20 873728 873919 -65794086 - MER4D LTR ERV1 -717 186 1 427 273 97 3 chr20 874734 874914 -65793091 + MIR SINE MIR 11 249 -13 381 384 69 16 chr20 875267 875645 -65792360 - L1MC4a LINE L1 -1901 5907 5510 629 328 64 0 chr20 875877 876112 -65791893 + MIR SINE MIR 13 262 0 215 223 38 2 chr20 876633 876694 -65791311 + MIR SINE MIR 85 141 -67 343 333 8 25 chr20 877001 877121 -65790884 - L1MC4a LINE L1 -1878 5930 5813 869 138 31 25 chr20 877284 877444 -65790561 - THE1C LTR MaLR -45 330 170 338 256 124 16 chr20 877444 877573 -65790432 - L1MC4a LINE L1 -2043 5765 5623 1912 216 77 17 chr20 877578 878322 -65789683 + L1MC/D LINE L1 4930 5740 -743 1816 162 17 45 chr20 878325 878683 -65789322 - THE1C LTR MaLR 0 375 28 709 128 17 0 chr20 878683 878800 -65789205 + AluSc SINE Alu 178 296 -13 765 238 31 9 chr20 878803 879030 -65788975 - L2 LINE L2 -144 3169 2938 190 169 67 112 chr20 879604 879693 -65788312 + MIR SINE MIR 59 143 -65 369 316 117 23 chr20 879694 879960 -65788045 + L1ME LINE L1 5370 5660 -510 2142 141 3 0 chr20 880102 880472 -65787533 + AluSx SINE Alu 5 375 0 2461 99 0 0 chr20 880547 880859 -65787146 - AluSx SINE Alu 0 312 1 227 364 0 0 chr20 881139 881238 -65786767 + MIR SINE MIR 139 237 -25 322 333 72 9 chr20 881654 881877 -65786128 - MIR SINE MIR -15 247 5 654 312 48 82 chr20 882329 882738 -65785267 - L1MC4a LINE L1 -1748 6060 5682 2304 77 0 7 chr20 882738 883045 -65784960 - AluY SINE Alu 0 305 1 654 312 48 82 chr20 883045 883326 -65784679 - L1MC4a LINE L1 -2126 5682 5393 532 244 19 19 chr20 883522 883678 -65784327 + MIR SINE MIR 101 256 -6 517 200 86 100 chr20 883699 883825 -65784180 - MIR SINE MIR -1 261 138 2585 43 13 3 chr20 883825 884129 -65783876 + AluY SINE Alu 1 307 -4 517 200 86 100 chr20 884129 884212 -65783793 - MIR SINE MIR -124 138 55 588 223 104 75 chr20 884287 884542 -65783463 - MLT1G LTR MaLR -2 588 286 350 233 0 0 chr20 884938 885011 -65782994 + L2 LINE L2 3241 3313 0 185 328 31 0 chr20 885188 885252 -65782753 + MIR SINE MIR 186 251 -11 1733 209 0 0 chr20 885360 885671 -65782334 + AluJo SINE Alu 1 311 -1 313 198 22 77 chr20 886678 886769 -65781236 + L1MCa LINE L1 1979 2064 -4362 2161 129 10 3 chr20 886773 887075 -65780930 + AluJo SINE Alu 1 304 -8 183 80 0 0 chr20 887078 887103 -65780902 + (CA)n Simple_repeat Simple_repeat 2 26 0 297 253 21 32 chr20 887251 887346 -65780659 - MER5A DNA MER1_type -69 120 27 308 282 23 46 chr20 887384 887515 -65780490 - MIR SINE MIR -59 149 22 431 217 12 42 chr20 888477 888643 -65779362 + G-rich Low_complexity Low_complexity 5 165 0 184 149 85 0 chr20 888778 888825 -65779180 + MIR SINE MIR 82 132 -76 292 234 8 23 chr20 889426 889559 -65778446 + GA-rich Low_complexity Low_complexity 1 130 0 252 271 24 0 chr20 889575 889660 -65778345 + GA-rich Low_complexity Low_complexity 1 87 0 215 133 22 0 chr20 889675 889720 -65778285 + GA-rich Low_complexity Low_complexity 2 47 0 252 306 102 10 chr20 890314 890412 -65777593 - MIR SINE MIR 0 262 156 312 229 0 0 chr20 891173 891256 -65776749 + (CCCA)n Simple_repeat Simple_repeat 4 86 0 581 228 6 0 chr20 891269 891431 -65776574 + (CCCA)n Simple_repeat Simple_repeat 4 166 0 644 274 110 48 chr20 891448 891802 -65776203 - L2 LINE L2 0 3313 2938 182 273 0 0 chr20 892116 892160 -65775845 + MIR SINE MIR 47 90 -172 748 263 0 22 chr20 892229 892408 -65775597 + MIR SINE MIR 52 226 -36 434 328 149 13 chr20 892494 892869 -65775136 + MER20B DNA MER1_type 27 452 -331 605 254 12 12 chr20 892951 893124 -65774881 + MER20B DNA MER1_type 611 783 0 198 0 0 0 chr20 893548 893570 -65774435 + (CAGA)n Simple_repeat Simple_repeat 2 23 0 221 317 156 10 chr20 893761 893966 -65774039 - L2 LINE L2 -221 3051 2817 382 311 0 0 chr20 894082 894172 -65773833 - L1MC4 LINE L1 -1339 6703 6614 321 242 0 0 chr20 894204 894266 -65773739 - L1MC4 LINE L1 -1339 6703 6642 191 256 122 0 chr20 894299 894381 -65773624 - MIR SINE MIR -94 168 77 350 336 0 16 chr20 894438 894563 -65773442 - L2 LINE L2 0 3313 3191 656 270 20 15 chr20 895137 895341 -65772664 + L2 LINE L2 3109 3313 0 731 264 8 72 chr20 895741 895991 -65772014 - MIR SINE MIR -7 255 22 1675 158 44 11 chr20 895991 896306 -65771699 + AluJo SINE Alu 1 324 0 187 328 16 0 chr20 896928 896992 -65771013 - MIR SINE MIR -86 122 58 1931 244 16 5 chr20 897642 898068 -65769937 + MLT1J LTR MaLR 74 504 -7 1938 167 20 0 chr20 898444 898744 -65769261 + AluJo SINE Alu 1 306 -6 215 208 0 21 chr20 899656 899704 -65768301 + CT-rich Low_complexity Low_complexity 4 50 0 1827 160 10 10 chr20 900246 900552 -65767453 - AluJo SINE Alu -6 306 1 896 209 68 0 chr20 900602 900779 -65767226 - MER5A DNA MER1_type 0 189 1 437 255 47 63 chr20 900780 901078 -65766927 + L1ME3 LINE L1 5650 5948 -214 21 0 0 0 chr20 901172 901193 -65766812 + AT_rich Low_complexity Low_complexity 1 21 0 470 256 70 58 chr20 901430 901476 -65766529 + MLT1J LTR MaLR 19 63 -448 2061 133 0 3 chr20 901476 901776 -65766229 - AluJb SINE Alu -13 299 1 470 256 70 58 chr20 901776 901901 -65766104 + MLT1J LTR MaLR 63 192 -319 298 225 62 12 chr20 902417 902497 -65765508 - MIR SINE MIR -63 145 62 294 283 71 10 chr20 902712 902811 -65765194 - MIR3 SINE MIR -28 180 76 1653 99 5 14 chr20 902850 903121 -65764884 - AluSg/x SINE Alu 0 334 66 564 269 78 42 chr20 903947 904336 -65763669 + MLT1K LTR MaLR 150 588 0 233 192 77 0 chr20 905115 905167 -65762838 - L2 LINE L2 -3 3269 3214 578 244 75 12 chr20 905192 905352 -65762653 + MIR SINE MIR 79 248 -14 270 298 230 12 chr20 905438 905599 -65762406 + MIR SINE MIR 47 242 -20 576 253 101 17 chr20 906236 906414 -65761591 + Charlie8 DNA MER1_type 84 276 -2141 1084 144 11 11 chr20 906527 906715 -65761290 - MER5A DNA MER1_type 0 189 2 594 245 14 14 chr20 906733 906880 -65761125 + MIR SINE MIR 36 182 -80 668 296 5 23 chr20 907587 907807 -65760198 + MIR SINE MIR 41 256 -6 574 274 121 18 chr20 908365 908588 -65759417 + L2 LINE L2 2341 2586 -728 444 308 100 23 chr20 908591 908763 -65759242 + L2 LINE L2 2842 2999 -314 1410 281 7 26 chr20 908763 909215 -65758790 + LTR47B LTR ERVL 1 443 0 444 308 100 23 chr20 909215 909393 -65758612 + L2 LINE L2 2999 3219 -94 509 227 59 0 chr20 909506 909625 -65758380 - MIR SINE MIR -101 161 36 234 158 18 70 chr20 910145 910202 -65757803 - MER5A DNA MER1_type 0 189 136 203 273 0 18 chr20 910451 910506 -65757499 - MIR SINE MIR -99 163 110 2142 120 3 0 chr20 910653 910945 -65757060 + AluSx SINE Alu 1 293 -19 212 0 0 35 chr20 910948 910977 -65757028 + (TAAAA)n Simple_repeat Simple_repeat 5 32 0 227 239 0 0 chr20 911954 912000 -65756005 + L2 LINE L2 3261 3306 -7 224 313 24 12 chr20 912583 912666 -65755339 + MIR SINE MIR 23 106 -102 219 197 167 15 chr20 913037 913103 -65754902 + MIR SINE MIR 105 180 -82 520 232 96 0 chr20 913224 913349 -65754656 - MIR SINE MIR -85 177 41 2211 115 0 10 chr20 913466 913762 -65754243 + AluSg SINE Alu 1 293 -17 360 250 22 0 chr20 914152 914244 -65753761 + MIR3 SINE MIR 82 175 -33 1081 144 7 7 chr20 914253 914760 -65753245 + (TCCA)n Simple_repeat Simple_repeat 1 685 0 232 234 0 0 chr20 914760 914807 -65753198 - L2 LINE L2 0 3313 3267 252 314 0 12 chr20 914911 914997 -65753008 + L2 LINE L2 3188 3272 0 321 282 27 46 chr20 916164 916393 -65751612 + L1M3 LINE L1 5258 5484 -680 240 327 30 0 chr20 916458 916559 -65751446 - MIR SINE MIR -65 143 40 250 236 236 11 chr20 916817 916906 -65751099 + MIR SINE MIR 32 140 -122 1998 151 0 16 chr20 916916 917221 -65750784 + AluJo SINE Alu 3 302 -10 709 257 229 12 chr20 917250 917880 -65750125 - L2 LINE L2 -2 3270 2497 189 244 183 37 chr20 917870 917952 -65750053 + MIR SINE MIR 163 256 -6 * 2271 123 0 0 chr20 917953 918261 -65749744 - AluSx SINE Alu -4 308 1 470 282 93 39 chr20 918637 918854 -65749151 + MIR SINE MIR 16 243 -19 182 273 23 0 chr20 918882 918926 -65749079 + L2 LINE L2 3250 3294 -19 206 280 0 0 chr20 919131 919181 -65748824 + MIR SINE MIR 114 163 -99 418 297 30 13 chr20 919331 919534 -65748471 - MIR SINE MIR -19 243 38 555 165 31 0 chr20 919842 919969 -65748036 + CT-rich Low_complexity Low_complexity 2 132 0 219 129 0 0 chr20 919973 920004 -65748001 + (TC)n Simple_repeat Simple_repeat 2 32 0 732 203 0 0 chr20 920517 920650 -65747355 - FLAM_A SINE Alu 0 133 1 463 300 150 40 chr20 920898 921351 -65746654 + L1M2 LINE L1 1737 4247 -2601 365 0 0 0 chr20 921674 921725 -65746280 - AluSp/q SINE Alu 0 303 253 229 229 16 16 chr20 921736 921797 -65746208 - MIR SINE MIR -122 140 80 366 280 134 25 chr20 921988 922145 -65745860 - MIR SINE MIR -42 220 47 421 217 0 0 chr20 922252 922335 -65745670 - MIR SINE MIR -117 145 63 343 277 21 43 chr20 922885 923026 -65744979 + MIR SINE MIR 47 184 -78 245 209 23 105 chr20 923042 923128 -65744877 + MIR SINE MIR 7 85 -177 346 171 29 0 chr20 923129 923199 -65744806 + MER116 DNA Mariner 4 75 -5 355 173 62 12 chr20 923207 923288 -65744717 + MIR SINE MIR 108 192 -70 722 238 132 5 chr20 923308 923497 -65744508 + MIR SINE MIR 13 225 -37 2183 118 0 24 chr20 923977 924274 -65743731 - AluSx SINE Alu -22 290 1 218 293 94 12 chr20 924447 924576 -65743429 + MIR3 SINE MIR 56 202 -6 275 369 15 0 chr20 924734 924864 -65743141 + MIR SINE MIR 60 191 -71 251 343 157 0 chr20 925044 925178 -65742827 + MIR SINE MIR 28 182 -80 231 323 0 0 chr20 925283 925345 -65742660 + (CA)n Simple_repeat Simple_repeat 2 63 0 258 143 77 55 chr20 925347 925438 -65742567 + MER112 DNA MER1_type 60 152 -108 448 228 43 0 chr20 925505 925597 -65742408 + MER58C DNA MER1_type 118 213 -2 356 102 0 17 chr20 925617 925676 -65742329 + (CATTC)n Simple_repeat Simple_repeat 2 59 0 272 220 34 0 chr20 925955 926014 -65741991 - MER58 DNA MER1_type -25 2395 130 236 309 0 15 chr20 926079 926147 -65741858 + L2 LINE L2 3235 3301 -12 379 262 82 33 chr20 926418 926540 -65741465 + MIR SINE MIR 24 151 -111 180 188 0 0 chr20 926804 926836 -65741169 - L2 LINE L2 -19 3294 3263 247 328 35 34 chr20 927164 927342 -65740663 - MIR3 SINE MIR -64 144 12 347 316 85 24 chr20 927373 927591 -65740414 - MIR SINE MIR -15 247 13 231 287 66 33 chr20 928103 928225 -65739780 + L2 LINE L2 3146 3271 -1 1915 116 3 89 chr20 928396 928723 -65739282 - AluJb SINE Alu -11 301 3 267 147 191 0 chr20 928754 928822 -65739183 - MER103 DNA DNA -85 81 1 277 196 22 141 chr20 929236 929277 -65738728 - MIR3 SINE MIR -24 184 157 2223 107 0 0 chr20 929277 929579 -65738426 - AluSx SINE Alu 0 302 1 277 196 22 141 chr20 929579 929628 -65738377 - MIR3 SINE MIR -51 157 104 504 236 19 9 chr20 929664 929770 -65738235 + MIR SINE MIR 39 145 -63 578 283 16 2 chr20 929977 930142 -65737863 - MIR SINE MIR -21 187 12 236 320 75 34 chr20 930468 930615 -65737390 + MIR SINE MIR 76 228 -34 22 35 0 0 chr20 931636 931665 -65736340 + GC_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr20 931767 931790 -65736215 + GC_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr20 931800 931836 -65736169 + GC_rich Low_complexity Low_complexity 1 36 0 534 279 78 22 chr20 932635 932814 -65735191 - MIR SINE MIR -5 257 69 2463 96 0 3 chr20 932942 933255 -65734750 - AluSx SINE Alu 0 312 1 273 385 7 7 chr20 933467 933610 -65734395 - MIR3 SINE MIR -23 185 43 482 292 172 43 chr20 933617 934046 -65733959 + L2 LINE L2 2781 3272 0 441 274 280 26 chr20 934244 934670 -65733335 + L2 LINE L2 2787 3313 0 203 355 36 36 chr20 934684 934822 -65733183 + MIR3 SINE MIR 71 208 0 658 138 24 67 chr20 935201 935350 -65732655 - MLT1J2 LTR MaLR -311 139 14 214 256 198 0 chr20 935366 935452 -65732553 + L2 LINE L2 2589 2691 -623 278 157 20 0 chr20 935538 935589 -65732416 + MER81 DNA DNA 1 52 -62 4397 223 49 36 chr20 935614 935774 -65732231 - L1MD1 LINE L1 -122 6120 5964 1960 136 25 0 chr20 935774 936060 -65731945 - AluJb SINE Alu -19 293 1 4397 223 49 36 chr20 936060 937868 -65730137 - L1MD1 LINE L1 -278 5964 3639 1162 204 225 43 chr20 937847 937917 -65730088 + L1MDb LINE L1 732 788 -5621 * 2325 108 3 3 chr20 937917 938222 -65729783 + AluSx SINE Alu 1 305 -7 1162 204 225 43 chr20 938222 938591 -65729414 + L1MDb LINE L1 788 1251 -5158 713 228 35 93 chr20 938598 938888 -65729117 + LTR16C LTR ERVL 218 490 -1 1026 209 48 4 chr20 939563 939793 -65728212 + MIR SINE MIR 23 262 0 376 235 96 0 chr20 939985 940100 -65727905 - MIR3 SINE MIR -24 184 59 298 301 98 21 chr20 941206 941349 -65726656 + MIR SINE MIR 103 256 -6 982 254 98 0 chr20 941396 941632 -65726373 + MIR SINE MIR 4 262 0 743 280 177 24 chr20 941901 942319 -65725686 - L2 LINE L2 0 3313 2832 322 192 36 34 chr20 942663 942802 -65725203 - MIR SINE MIR -63 145 3 498 239 155 0 chr20 943151 943306 -65724699 + LTR16C LTR ERVL 149 327 -164 743 252 98 28 chr20 943677 943963 -65724042 + L2 LINE L2 2867 3172 -141 1705 126 0 8 chr20 944214 944496 -65723509 + AluSq SINE Alu 47 326 0 478 270 44 19 chr20 944624 944783 -65723222 - MLT1J LTR MaLR -348 163 1 220 244 0 0 chr20 945300 945357 -65722648 + MIR SINE MIR 97 143 -65 2195 144 0 0 chr20 945660 945973 -65722032 - AluSq SINE Alu 0 313 1 297 289 118 0 chr20 945977 946112 -65721893 + L2 LINE L2 2231 2381 -933 201 206 0 82 chr20 946162 946235 -65721770 + C-rich Low_complexity Low_complexity 3 69 0 658 209 58 62 chr20 946380 946605 -65721400 + LTR16C LTR ERVL 160 383 -108 383 267 17 17 chr20 946770 946886 -65721119 + L2 LINE L2 2934 3049 -223 249 227 83 83 chr20 946974 947106 -65720899 - L2 LINE L2 -1 3271 3140 656 224 75 0 chr20 947241 947402 -65720603 + MER58A DNA MER1_type 34 206 -18 603 133 11 51 chr20 947414 947550 -65720455 - MLT1F LTR MaLR -46 547 389 286 167 0 0 chr20 947525 947573 -65720432 - MLT1F LTR MaLR -293 249 202 * 570 298 81 10 chr20 947589 947787 -65720218 - MIR SINE MIR -48 214 3 243 282 51 54 chr20 948304 948439 -65719566 + MIR SINE MIR 20 154 -54 356 279 81 22 chr20 948659 948795 -65719210 - MIR SINE MIR -71 191 48 196 200 31 0 chr20 948851 948916 -65719089 + (TCCA)n Simple_repeat Simple_repeat 1 67 0 224 266 9 0 chr20 948954 949063 -65718942 + (TCCA)n Simple_repeat Simple_repeat 3 112 0 383 230 28 0 chr20 949115 949372 -65718633 + (TCCA)n Simple_repeat Simple_repeat 1 264 0 1013 280 134 27 chr20 949378 949867 -65718138 - L2 LINE L2 -3 3310 2755 340 251 102 58 chr20 950100 950295 -65717710 - MIR SINE MIR -49 213 13 228 340 87 13 chr20 950378 950528 -65717477 - MIR3 SINE MIR -20 188 28 528 263 40 17 chr20 951081 951282 -65716723 + MIR SINE MIR 41 252 -10 288 279 141 66 chr20 952010 952315 -65715690 + MLT1K LTR MaLR 261 588 0 327 362 14 14 chr20 952361 952502 -65715503 + MIR3 SINE MIR 5 145 -63 438 267 20 62 chr20 952885 952914 -65715091 + L1MC4a LINE L1 5178 5207 -939 1799 166 82 0 chr20 952914 953245 -65714760 - MER46B DNA MER2_type 0 236 4 438 267 20 62 chr20 953245 953410 -65714595 + L1MC4a LINE L1 5207 5364 -782 230 232 12 73 chr20 953411 953493 -65714512 + L1MC4a LINE L1 5456 5532 -589 551 305 30 30 chr20 953494 953694 -65714311 + L2 LINE L2 3114 3313 0 431 308 91 18 chr20 953745 954086 -65713919 + L1MC4a LINE L1 5564 5929 -1879 2111 105 4 4 chr20 954099 954427 -65713578 + AluSg SINE Alu 3 330 0 198 103 0 0 chr20 954453 954482 -65713523 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 586 279 78 7 chr20 954621 954904 -65713101 - L1ME3A LINE L1 -12 6158 5856 1881 191 71 28 chr20 954970 955463 -65712542 - L1MC4 LINE L1 -285 7757 7244 6477 77 44 3 chr20 955485 955965 -65712040 - L1PA13 LINE L1 -11 6152 5693 2285 130 0 0 chr20 955965 956273 -65711732 - AluSx SINE Alu -4 308 1 6477 77 44 3 chr20 956273 956900 -65711105 - L1PA13 LINE L1 -470 5693 5024 451 280 25 65 chr20 958753 958953 -65709052 + MIR SINE MIR 48 239 -23 323 332 151 11 chr20 959057 959322 -65708683 + L2 LINE L2 2955 3256 -16 400 211 189 11 chr20 959518 959613 -65708392 - MER81 DNA DNA -2 112 1 227 295 21 53 chr20 959709 959746 -65708259 + LTR67 LTR ERVL 81 169 -385 328 146 0 0 chr20 959746 959801 -65708204 + MLT1J2 LTR MaLR 72 126 -324 * 739 238 155 0 chr20 959768 960020 -65707985 + MLT1L LTR MaLR 196 486 -129 2221 196 72 118 chr20 960028 960312 -65707693 + L1ME3 LINE L1 5142 5437 -725 2256 107 3 0 chr20 960312 960603 -65707402 + AluSp SINE Alu 3 294 -19 2221 196 72 118 chr20 960603 961389 -65706616 + L1ME3 LINE L1 5437 6160 -2 418 320 20 70 chr20 961568 961687 -65706318 - MIR SINE MIR -65 197 90 2222 111 10 0 chr20 961687 961985 -65706020 - AluSx SINE Alu -11 301 1 418 320 20 70 chr20 961985 962065 -65705940 - MIR SINE MIR -172 90 8 234 213 150 0 chr20 962263 962343 -65705662 + Charlie7 DNA MER1_type 14 105 -2507 * 252 216 32 48 chr20 962336 962461 -65705544 + Charlie7 DNA MER1_type 2440 2562 -50 878 203 6 0 chr20 962554 962712 -65705293 - FRAM SINE Alu -12 164 6 590 173 0 38 chr20 962753 962886 -65705119 + L1MA4 LINE L1 6173 6300 0 400 275 155 50 chr20 962925 963183 -65704822 - HAL1 LINE L1 -473 2034 1750 419 285 141 57 chr20 963269 963658 -65704347 + MLT1H LTR MaLR 118 539 -10 267 135 19 0 chr20 963663 963715 -65704290 - HAL1 LINE L1 -762 1745 1693 1468 246 127 14 chr20 963722 964211 -65703794 + MLT1H1 LTR MaLR 10 552 -3 293 232 143 63 chr20 964306 964543 -65703462 - HAL1 LINE L1 -1425 1082 827 263 344 99 18 chr20 964790 965011 -65702994 - HAL1 LINE L1 -2001 506 268 471 309 88 44 chr20 965598 965870 -65702135 + L2 LINE L2 2989 3272 0 528 254 148 0 chr20 967040 967209 -65700796 - MIR SINE MIR 0 262 69 436 256 17 26 chr20 967259 967376 -65700629 + L2 LINE L2 3197 3312 -1 635 203 105 7 chr20 967971 968124 -65699881 - MIR SINE MIR -10 252 85 274 244 146 12 chr20 968371 968453 -65699552 - MIR3 SINE MIR -10 198 106 235 247 173 80 chr20 968906 969068 -65698937 + L3 LINE CR1 996 1172 -405 1804 140 56 0 chr20 969242 969528 -65698477 + AluSx SINE Alu 1 302 -10 715 283 123 49 chr20 969529 970016 -65697989 + Charlie1b DNA MER1_type 1 523 0 249 380 10 0 chr20 970016 970116 -65697889 + L3 LINE CR1 1366 1466 -111 984 320 78 12 chr20 970205 970765 -65697240 + L2 LINE L2 2714 3312 -1 201 121 0 0 chr20 970775 970808 -65697197 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 407 283 108 0 chr20 971519 971639 -65696366 + L2 LINE L2 3180 3312 -1 649 239 78 58 chr20 971653 971858 -65696147 - MIR SINE MIR -50 212 4 370 245 129 52 chr20 971867 972022 -65695983 + MIR SINE MIR 70 236 -26 365 283 51 0 chr20 972339 972478 -65695527 - MIR SINE MIR -55 153 5 903 283 100 6 chr20 972676 973026 -65694979 - LTR16A LTR ERVL -8 442 60 404 239 127 14 chr20 973173 973315 -65694690 - MIR SINE MIR -62 200 43 231 309 84 46 chr20 973389 973651 -65694354 - L2 LINE L2 -86 3186 2915 425 254 179 17 chr20 974722 974895 -65693110 - MLT1K LTR MaLR -12 576 376 307 226 98 53 chr20 975112 975245 -65692760 - MIR SINE MIR -93 169 31 282 283 0 0 chr20 975384 975543 -65692462 + (TGGA)n Simple_repeat Simple_repeat 4 162 0 188 289 105 53 chr20 975998 976150 -65691855 - MIR3 SINE MIR -21 187 28 730 262 109 23 chr20 976327 976583 -65691422 - L2 LINE L2 -8 3305 3028 1066 226 131 27 chr20 976599 976957 -65691048 + MLT1J2 LTR MaLR 16 381 -69 737 291 216 12 chr20 976992 977404 -65690601 - L2 LINE L2 -343 2971 2476 1468 245 134 31 chr20 978074 978613 -65689392 + MLT1G1 LTR MaLR 1 594 -1 293 292 50 50 chr20 979027 979147 -65688858 - L2 LINE L2 -1 3312 3193 635 278 87 57 chr20 979147 979296 -65688709 + L2 LINE L2 2920 3063 -250 1893 145 10 3 chr20 979296 979599 -65688406 - AluSx SINE Alu -7 305 1 635 278 87 57 chr20 979599 979816 -65688189 + L2 LINE L2 3063 3297 -16 776 235 107 21 chr20 980324 980558 -65687447 + MIR SINE MIR 4 257 -5 892 186 27 27 chr20 980662 980845 -65687160 + L2 LINE L2 3127 3309 -4 26 30 0 0 chr20 981379 981412 -65686593 + AT_rich Low_complexity Low_complexity 1 33 0 544 289 57 0 chr20 981753 981912 -65686093 + MIR SINE MIR 20 187 -75 189 260 40 0 chr20 981929 981979 -65686026 - L2 LINE L2 -11 3261 3210 375 290 99 0 chr20 982705 982836 -65685169 - MIR SINE MIR -23 239 96 210 269 170 35 chr20 983031 983202 -65684803 + MIR SINE MIR 39 232 -30 1624 134 6 113 chr20 983202 983537 -65684468 + AluSx SINE Alu 2 300 -2 374 240 33 16 chr20 983661 983782 -65684223 + L1ME4a LINE L1 5960 6082 -39 1939 122 3 3 chr20 984056 984343 -65683662 - AluSx SINE Alu -25 287 1 285 246 52 44 chr20 984414 984536 -65683469 + MER5A DNA MER1_type 9 141 -48 196 313 0 45 chr20 984572 984639 -65683366 - MIR3 SINE MIR -43 165 102 217 284 25 12 chr20 984977 985058 -65682947 + MIR SINE MIR 111 192 -70 274 347 113 16 chr20 985268 985516 -65682489 + L2 LINE L2 2636 2907 -407 1643 170 87 32 chr20 986334 986704 -65681301 + MLT1B LTR MaLR 1 390 0 705 214 49 86 chr20 986730 986973 -65681032 - MER106A DNA MER1_type 0 236 3 470 281 87 56 chr20 986998 987216 -65680789 + MLT1L LTR MaLR 200 470 -145 1940 117 14 0 chr20 987216 987498 -65680507 - AluSq SINE Alu -27 286 1 470 281 87 56 chr20 987498 987645 -65680360 + MLT1L LTR MaLR 470 611 -4 453 275 155 40 chr20 987651 987902 -65680103 - MLT1K LTR MaLR -302 286 7 289 286 109 54 chr20 988107 988254 -65679751 - L2 LINE L2 0 3272 3118 764 299 48 81 chr20 988664 988855 -65679150 - LTR16A LTR ERVL 0 450 277 748 97 0 18 chr20 988855 988969 -65679036 + L1MA2 LINE L1 6193 6304 0 764 299 48 81 chr20 988969 989171 -65678834 - LTR16A LTR ERVL -173 277 70 325 299 37 0 chr20 989498 989605 -65678400 - MIR SINE MIR -3 259 149 579 232 222 40 chr20 990380 990722 -65677283 - MLT1H LTR MaLR -25 384 30 240 250 0 0 chr20 990896 990944 -65677061 + L2 LINE L2 2995 3042 -271 278 326 33 0 chr20 991033 991125 -65676880 + MIR SINE MIR 60 154 -108 454 189 189 8 chr20 991133 991265 -65676740 - MLT1L LTR MaLR -2 613 458 436 20 0 0 chr20 991318 991369 -65676636 + MADE1 DNA Mariner 2 52 -28 557 57 0 0 chr20 991372 991442 -65676563 + MADE1 DNA Mariner 7 76 -4 270 77 0 96 chr20 991422 991474 -65676531 + MADE1 DNA Mariner 32 78 -2 * 457 316 163 3 chr20 991978 992266 -65675739 + L2 LINE L2 1873 2206 -1108 * 1001 204 6 0 chr20 992264 992445 -65675560 - MER5A DNA MER1_type -6 183 2 * 1779 322 93 16 chr20 992445 992477 -65675528 + L2 LINE L2 2172 2200 -1113 728 225 23 17 chr20 992477 992650 -65675355 - MER5B DNA MER1_type -3 175 2 1779 322 93 16 chr20 992650 993674 -65674331 + L2 LINE L2 2200 3298 -15 212 313 0 0 chr20 993674 993722 -65674283 + polypurine Low_complexity Low_complexity 5 52 0 274 321 64 9 chr20 993890 993999 -65674006 + L2 LINE L2 3158 3272 0 327 233 381 0 chr20 994534 994723 -65673282 + L2 LINE L2 2905 3165 -148 21 95 0 0 chr20 994738 994801 -65673204 + AT_rich Low_complexity Low_complexity 1 63 0 2295 100 0 0 chr20 995060 995361 -65672644 - AluSc SINE Alu -8 301 1 1493 265 47 22 chr20 995444 996190 -65671815 - L1MEc LINE L1 -4714 1880 934 1540 271 149 17 chr20 996759 997402 -65670603 + L2 LINE L2 1252 1979 -1335 391 264 11 0 chr20 997404 997495 -65670510 + L2 LINE L2 2081 2172 -1142 969 181 65 138 chr20 997525 997895 -65670110 - MLT1A1 LTR MaLR -22 343 1 320 277 71 9 chr20 997899 998011 -65669994 + L2 LINE L2 2186 2304 -1010 513 296 90 17 chr20 998268 998612 -65669393 - L1ME LINE L1 -533 5629 5261 257 284 61 41 chr20 998729 998926 -65669079 - L1ME3A LINE L1 -5 6165 5965 2531 245 49 50 chr20 999010 999423 -65668582 - L1MC5 LINE L1 -429 7532 7120 1649 177 32 62 chr20 999423 999824 -65668181 + MLT1B LTR MaLR 1 389 -1 2531 245 49 50 chr20 999824 1000480 -65667525 - L1MC5 LINE L1 -841 7120 6471 229 278 67 100 chr20 1000716 1000883 -65667122 - HAL1b LINE L1 -690 658 487 2161 106 0 0 chr20 1000883 1001176 -65666829 + AluSx SINE Alu 1 293 -19 229 278 67 100 chr20 1001176 1001347 -65666658 - HAL1b LINE L1 -861 487 312 2257 89 3 0 chr20 1001347 1001651 -65666354 + AluSg SINE Alu 1 305 -5 229 278 67 100 chr20 1001651 1001923 -65666082 - HAL1b LINE L1 -1036 312 67 1316 178 50 23 chr20 1002406 1002665 -65665340 - MLT1C LTR MaLR -201 266 1 2091 136 120 26 chr20 1003010 1003250 -65664755 - MSTA LTR MaLR 0 428 135 2052 132 0 0 chr20 1003250 1003553 -65664452 + AluSx SINE Alu 1 303 -9 2091 136 120 26 chr20 1003553 1003703 -65664302 - MSTA LTR MaLR -293 135 1 229 263 32 0 chr20 1003998 1004093 -65663912 + MER113 DNA MER1_type? 39 136 -385 26 50 0 0 chr20 1004093 1004133 -65663872 + AT_rich Low_complexity Low_complexity 1 40 0 1216 263 22 19 chr20 1004487 1004644 -65663361 + MER113 DNA MER1_type? 156 311 -210 919 127 0 15 chr20 1004644 1004778 -65663227 + FLAM_C SINE Alu 1 132 -1 1216 263 22 19 chr20 1004778 1004985 -65663020 + MER113 DNA MER1_type? 311 521 0 351 204 57 34 chr20 1005065 1005153 -65662852 - MLT1H LTR MaLR -6 543 454 494 253 71 45 chr20 1005240 1005394 -65662611 - MLT1H LTR MaLR -226 323 166 266 213 82 16 chr20 1005408 1005469 -65662536 - MLT1H LTR MaLR -484 65 1 1968 122 3 7 chr20 1006017 1006312 -65661693 + AluSx SINE Alu 1 294 -18 1962 216 61 49 chr20 1006372 1007271 -65660734 - L1MDa LINE L1 -3413 3127 2205 249 260 52 10 chr20 1007271 1007367 -65660638 + MER69 DNA AcHobo 2412 2511 -15 1802 134 30 23 chr20 1007377 1007676 -65660329 + AluSx SINE Alu 3 303 -9 1851 114 0 0 chr20 1008157 1008411 -65659594 - AluSx SINE Alu -58 254 1 704 230 29 113 chr20 1008415 1008759 -65659246 + L2 LINE L2 2988 3302 -11 198 0 0 0 chr20 1008759 1008781 -65659224 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 798 264 55 78 chr20 1009403 1009664 -65658341 - MER102b DNA MER1_type -1102 326 72 2128 204 131 17 chr20 1009664 1010192 -65657813 - MLT1G LTR MaLR -2 588 1 798 264 55 78 chr20 1010192 1010237 -65657768 - MER102b DNA MER1_type -1356 72 27 1924 155 82 12 chr20 1010632 1010973 -65657032 + MLT1A1 LTR MaLR 1 365 0 272 271 113 40 chr20 1011120 1011271 -65656734 - MIR SINE MIR -71 191 30 191 305 126 46 chr20 1011289 1011463 -65656542 - L2 LINE L2 -421 2893 2706 339 293 91 47 chr20 1011823 1012076 -65655929 + MLT1K LTR MaLR 210 473 -115 196 225 7 176 chr20 1012167 1012219 -65655786 + MIR SINE MIR 102 117 -145 2153 122 0 0 chr20 1012219 1012523 -65655482 + AluSx SINE Alu 1 304 -8 196 225 7 176 chr20 1012523 1012612 -65655393 + MIR SINE MIR 117 219 -43 253 302 9 17 chr20 1012637 1012753 -65655252 + L1M4 LINE L1 4489 4603 -1543 1437 195 38 30 chr20 1012819 1013189 -65654816 + MER93b LTR ERV1 1 373 0 1054 259 58 31 chr20 1013222 1013574 -65654431 + MLT1I LTR MaLR 39 450 0 22 0 0 0 chr20 1013721 1013743 -65654262 + AT_rich Low_complexity Low_complexity 1 22 0 514 214 90 28 chr20 1013757 1013902 -65654103 - MER103 DNA DNA -12 154 1 340 265 49 123 chr20 1013995 1014199 -65653806 - MIR SINE MIR -58 204 16 555 250 8 17 chr20 1014528 1014648 -65653357 + MER5A DNA MER1_type 62 180 -9 373 288 43 18 chr20 1014648 1014811 -65653194 + MLT1L LTR MaLR 136 302 -313 402 298 171 22 chr20 1014840 1015156 -65652849 - MLT1J LTR MaLR -27 484 122 560 258 6 30 chr20 1015560 1015727 -65652278 + MIR SINE MIR 86 248 -14 252 59 0 0 chr20 1016432 1016466 -65651539 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 689 268 167 35 chr20 1016875 1017222 -65650783 - MLT1I LTR MaLR 0 409 17 219 289 0 67 chr20 1017244 1017334 -65650671 - L2 LINE L2 -289 2983 2900 422 315 219 0 chr20 1017379 1017525 -65650480 - MIR SINE MIR -83 179 2 511 296 160 45 chr20 1017616 1018065 -65649940 - Charlie8 DNA MER1_type -1891 526 26 2279 234 14 14 chr20 1018100 1018588 -65649417 + MLT1F LTR MaLR 1 488 -54 845 218 165 0 chr20 1018597 1018785 -65649220 - MER58A DNA MER1_type 0 224 6 211 260 41 14 chr20 1019480 1019553 -65648452 + GA-rich Low_complexity Low_complexity 1 75 0 278 297 93 25 chr20 1019743 1019861 -65648144 - MLT1K LTR MaLR -317 271 146 270 224 9 75 chr20 1019847 1019954 -65648051 - MLT1L LTR MaLR -402 213 114 * 405 293 118 54 chr20 1020358 1020672 -65647333 - L2 LINE L2 -94 3178 2845 2263 96 24 0 chr20 1020705 1020998 -65647007 - AluSg SINE Alu -10 300 1 422 224 179 60 chr20 1021296 1021497 -65646508 + L1ME LINE L1 5537 5761 -360 248 259 37 12 chr20 1021764 1021845 -65646160 - MLT1L LTR MaLR -25 590 508 325 229 14 0 chr20 1022012 1022082 -65645923 - MLT1J LTR MaLR -332 179 109 239 260 41 14 chr20 1022021 1022094 -65645911 - LTR67 LTR ERVL -382 175 101 * 3888 156 55 35 chr20 1022517 1022551 -65645454 - MER44D DNA MER2_type -1882 605 573 2431 97 0 0 chr20 1022551 1022859 -65645146 - AluSc SINE Alu -1 308 1 3888 156 55 35 chr20 1022859 1023517 -65644488 - MER44D DNA MER2_type -1914 573 27 327 235 0 0 chr20 1023525 1023623 -65644382 + (TA)n Simple_repeat Simple_repeat 1 98 0 22 0 0 0 chr20 1023785 1023807 -65644198 + AT_rich Low_complexity Low_complexity 1 22 0 247 182 73 0 chr20 1023845 1023900 -65644105 + Charlie8 DNA MER1_type 1367 1425 -992 331 263 46 66 chr20 1024589 1024741 -65643264 - MIR3 SINE MIR -29 179 31 201 343 0 57 chr20 1024853 1024923 -65643082 - MIR SINE MIR -111 97 32 192 292 104 0 chr20 1025063 1025159 -65642846 + MIR SINE MIR 87 192 -70 300 27 0 0 chr20 1025240 1025277 -65642728 + (TG)n Simple_repeat Simple_repeat 2 38 0 286 286 12 0 chr20 1025298 1025382 -65642623 + CT-rich Low_complexity Low_complexity 2 86 0 243 0 0 0 chr20 1025550 1025577 -65642428 + (A)n Simple_repeat Simple_repeat 1 27 0 2839 257 68 11 chr20 1025919 1027054 -65640951 - L1ME3A LINE L1 -9 6659 5458 1482 178 39 70 chr20 1027057 1027412 -65640593 - MLT1A2 LTR MaLR 0 374 31 634 274 118 18 chr20 1027460 1027833 -65640172 - L1ME3A LINE L1 -1181 5463 5073 4851 171 50 54 chr20 1028391 1028514 -65639491 - L1MB7 LINE L1 -19 6165 6043 1433 113 19 0 chr20 1028514 1028726 -65639279 + L1MC1 LINE L1 6118 6333 0 4851 171 50 54 chr20 1028726 1029489 -65638516 - L1MB7 LINE L1 -141 6043 5278 2007 91 0 36 chr20 1029489 1029765 -65638240 - AluSq SINE Alu -7 306 41 4851 171 50 54 chr20 1029765 1030166 -65637839 - L1MB7 LINE L1 -906 5278 4877 2289 118 0 10 chr20 1030166 1030479 -65637526 + AluSg SINE Alu 1 310 0 4851 171 50 54 chr20 1030479 1031226 -65636779 - L1MB7 LINE L1 -1307 4877 4139 6152 193 62 86 chr20 1031271 1032378 -65635627 - L1ME3A LINE L1 -4456 2188 1136 1779 148 22 11 chr20 1032378 1032656 -65635349 - AluJo SINE Alu -13 299 19 6152 193 62 86 chr20 1032656 1033766 -65634239 - L1ME3A LINE L1 -5508 1136 1 832 162 42 63 chr20 1033767 1033958 -65634047 - MIR SINE MIR -43 219 33 431 261 51 14 chr20 1034005 1034143 -65633862 + MIR3 SINE MIR 24 166 -42 625 191 194 12 chr20 1034621 1034923 -65633082 + L2 LINE L2 2780 3132 -181 201 231 66 33 chr20 1035845 1035936 -65632069 - MIR SINE MIR -41 221 128 929 143 102 168 chr20 1035996 1036408 -65631597 + LTR37A LTR ERV1 42 426 0 300 259 0 25 chr20 1036529 1036610 -65631395 - MIR SINE MIR -60 148 81 222 37 0 0 chr20 1036621 1036648 -65631357 + (TG)n Simple_repeat Simple_repeat 2 28 0 378 209 0 23 chr20 1036913 1036999 -65631006 - MIR SINE MIR -156 106 23 311 234 298 13 chr20 1037012 1037170 -65630835 + MIR SINE MIR 47 249 -13 186 225 0 0 chr20 1037138 1037178 -65630827 + L2 LINE L2 3263 3302 -11 * 389 283 129 39 chr20 1037201 1037434 -65630571 - MIR SINE MIR 0 262 9 643 181 0 24 chr20 1037446 1037573 -65630432 - L2 LINE L2 0 3313 3190 447 269 148 0 chr20 1038304 1038453 -65629552 + MIR SINE MIR 42 212 -50 1526 228 73 3 chr20 1038896 1039277 -65628728 + L1ME1 LINE L1 5506 5913 -251 252 185 19 19 chr20 1039628 1039682 -65628323 + LTR16A LTR ERVL 381 434 -16 906 203 41 78 chr20 1039683 1039776 -65628229 + L1ME1 LINE L1 5903 5998 -168 2269 155 75 10 chr20 1039776 1040176 -65627829 + MSTB LTR MaLR 1 426 0 906 203 41 78 chr20 1040176 1040353 -65627652 + L1ME1 LINE L1 5998 6163 -3 348 213 38 0 chr20 1040398 1040478 -65627527 + L1ME1 LINE L1 6068 6150 -16 2376 96 0 0 chr20 1040484 1040775 -65627230 + AluSx SINE Alu 1 291 -21 405 195 34 34 chr20 1040778 1040896 -65627109 + MER97a DNA MER1_type? 746 863 -31 3361 189 16 0 chr20 1040907 1041631 -65626374 + L1M3 LINE L1 4717 5448 -732 850 133 8 16 chr20 1041632 1041760 -65626245 + FLAM_C SINE Alu 1 127 -16 879 115 21 103 chr20 1041762 1041925 -65626080 + L1MC/D LINE L1 5440 5575 -596 411 200 12 0 chr20 1041925 1042003 -65626002 + L1MB4 LINE L1 6095 6180 0 879 115 21 103 chr20 1042003 1042029 -65625976 + L1MC/D LINE L1 5575 5602 -569 2279 88 20 3 chr20 1042038 1042333 -65625672 - AluY SINE Alu -11 300 1 252 139 0 0 chr20 1042365 1042401 -65625604 + MER97a DNA MER1_type? 857 892 -2 195 163 0 47 chr20 1042469 1042512 -65625493 - L2 LINE L2 -217 3055 3015 432 0 0 0 chr20 1042856 1042904 -65625101 + (CA)n Simple_repeat Simple_repeat 2 49 0 201 262 0 82 chr20 1042956 1043017 -65624988 - L2 LINE L2 -80 3192 3137 2619 45 3 6 chr20 1043090 1043401 -65624604 - AluY SINE Alu -1 310 1 1002 218 37 25 chr20 1043595 1043838 -65624167 + LTR16C LTR ERVL 246 491 0 720 247 11 11 chr20 1044748 1044926 -65623079 + MER97c DNA MER1_type? 1 178 -912 206 179 0 0 chr20 1045094 1045133 -65622872 + L2 LINE L2 2932 2970 -302 2430 75 7 0 chr20 1045148 1045441 -65622564 - AluSg SINE Alu -15 295 1 211 368 52 15 chr20 1045748 1045884 -65622121 + MER5A DNA MER1_type 1 141 -48 591 240 106 56 chr20 1046051 1046372 -65621633 - L2 LINE L2 -56 3257 2921 768 254 5 0 chr20 1046377 1046562 -65621443 - L2 LINE L2 -667 2647 2462 534 276 109 26 chr20 1046586 1046739 -65621266 - L2 LINE L2 -423 2891 2752 2341 102 0 19 chr20 1046739 1047054 -65620951 - AluSx SINE Alu -3 309 1 534 276 109 26 chr20 1047054 1047211 -65620794 - L2 LINE L2 -562 2752 2555 485 243 122 6 chr20 1047329 1047505 -65620500 + MIR SINE MIR 58 252 -10 678 204 43 66 chr20 1047511 1047722 -65620283 + MIR SINE MIR 35 240 -22 22 35 0 0 chr20 1050529 1050558 -65617447 + AT_rich Low_complexity Low_complexity 1 29 0 257 257 37 37 chr20 1051581 1051690 -65616315 + MIR SINE MIR 27 135 -73 2019 127 10 16 chr20 1051696 1052010 -65615995 - AluSx SINE Alu 0 312 1 369 296 203 27 chr20 1052975 1053414 -65614591 - L1MC4a LINE L1 -1976 5832 5317 260 237 79 0 chr20 1053494 1053570 -65614435 - L1MC4a LINE L1 -915 5231 5150 851 270 167 16 chr20 1053794 1054224 -65613781 + L1ME3A LINE L1 5446 5940 -230 480 260 107 17 chr20 1054702 1054879 -65613126 + MIR3 SINE MIR 14 206 -2 316 326 136 13 chr20 1055084 1055320 -65612685 + L1ME LINE L1 5532 5796 -325 260 310 72 46 chr20 1055346 1055708 -65612297 + L2 LINE L2 2875 3239 -74 254 305 73 40 chr20 1055738 1055915 -65612090 - L1MC4a LINE L1 -1889 5919 5737 563 275 138 53 chr20 1055918 1056005 -65612000 - LTR67 LTR ERVL -1 556 478 1989 127 0 14 chr20 1056005 1056308 -65611697 + AluSx SINE Alu 3 301 0 563 275 138 53 chr20 1056308 1056691 -65611314 - LTR67 LTR ERVL -79 478 45 1894 176 73 38 chr20 1057255 1057681 -65610324 - L1MC1 LINE L1 -2 6331 5891 1084 278 79 31 chr20 1057662 1058119 -65609886 - L1MC4a LINE L1 -1155 6653 6175 * 1291 126 229 42 chr20 1058130 1058285 -65609720 - AluSx SINE Alu -1 311 186 2464 56 7 20 chr20 1058285 1058589 -65609416 - AluY SINE Alu -11 300 1 1291 126 229 42 chr20 1058589 1058695 -65609310 - AluSx SINE Alu -126 186 1 350 303 148 38 chr20 1058947 1059043 -65608962 + L2 LINE L2 2654 2738 -534 4105 130 50 14 chr20 1059043 1059757 -65608248 + L1MB3 LINE L1 5441 6180 -3 350 303 148 38 chr20 1059757 1060019 -65607986 + L2 LINE L2 2738 3063 -209 977 151 18 87 chr20 1060048 1060266 -65607739 - AluJo SINE Alu -21 291 89 276 217 122 26 chr20 1060783 1060898 -65607107 + MIR SINE MIR 123 248 -14 6278 224 69 45 chr20 1061387 1061666 -65606339 - L1MC4a LINE L1 -1199 4947 4676 2232 110 0 31 chr20 1061666 1061985 -65606020 - AluSc SINE Alu 0 309 1 6278 224 69 45 chr20 1061985 1062956 -65605049 - L1MC4a LINE L1 -1470 4676 3730 183 80 0 0 chr20 1062956 1062981 -65605024 + (TA)n Simple_repeat Simple_repeat 2 26 0 6278 224 69 45 chr20 1062981 1063909 -65604096 - L1MC4a LINE L1 -2416 3730 2716 230 263 11 53 chr20 1065656 1065751 -65602254 - MIR SINE MIR -95 113 23 2098 253 71 25 chr20 1065861 1066607 -65601398 - MER20B DNA MER1_type -1 783 4 308 259 3 3 chr20 1066649 1066753 -65601252 + L1MC5 LINE L1 7061 7228 -644 1183 233 67 67 chr20 1066885 1067469 -65600536 + L1MC5 LINE L1 7331 7914 -47 1383 215 43 7 chr20 1067484 1067786 -65600219 + L1MB8 LINE L1 3570 3882 -2264 1022 118 31 12 chr20 1067786 1067947 -65600058 + AluSg/x SINE Alu 135 298 -12 345 259 47 0 chr20 1067950 1068035 -65599970 + L1MB8 LINE L1 3873 3961 -2185 1305 186 0 5 chr20 1068038 1068259 -65599746 + AluJb SINE Alu 87 306 -6 2064 120 18 0 chr20 1068304 1068587 -65599418 + AluSx SINE Alu 1 288 -24 4909 209 45 45 chr20 1068610 1068958 -65599047 + L1MB8 LINE L1 3960 4307 -1867 1833 73 0 0 chr20 1068958 1069177 -65598828 + AluY SINE Alu 85 303 -8 4909 209 45 45 chr20 1069177 1070305 -65597700 + L1MB8 LINE L1 4307 5434 -740 1849 165 75 29 chr20 1070308 1070762 -65597243 + L1MB8 LINE L1 5703 6177 -1 3867 209 54 33 chr20 1071001 1071347 -65596658 + L1MD1 LINE L1 4050 4387 -1855 2206 73 3 31 chr20 1071347 1071635 -65596370 + AluSx SINE Alu 1 280 -32 180 0 0 0 chr20 1071636 1071656 -65596349 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 3867 209 54 33 chr20 1071656 1071680 -65596325 + L1MD1 LINE L1 4387 4409 -1833 5749 30 0 0 chr20 1071680 1072339 -65595666 - L1PA4 LINE L1 0 6155 5497 3867 209 54 33 chr20 1072339 1073219 -65594786 + L1MD1 LINE L1 4409 5361 -881 2149 111 10 13 chr20 1073219 1073525 -65594480 + AluSx SINE Alu 1 305 -7 3867 209 54 33 chr20 1073525 1074240 -65593765 + L1MD1 LINE L1 5361 6059 -183 236 193 44 114 chr20 1074243 1074310 -65593695 + L1MD2 LINE L1 6251 6308 -51 1901 148 39 0 chr20 1074310 1074594 -65593411 - AluSq SINE Alu -16 297 3 236 193 44 114 chr20 1074594 1074640 -65593365 + L1MD2 LINE L1 6308 6356 -3 252 341 64 58 chr20 1074789 1074962 -65593043 - L2 LINE L2 -174 3098 2925 370 308 109 0 chr20 1076090 1076246 -65591759 + MIR SINE MIR 18 190 -72 393 22 0 0 chr20 1076546 1076592 -65591413 + (CAT)n Simple_repeat Simple_repeat 2 47 0 336 340 37 37 chr20 1076660 1076848 -65591157 - MIR SINE MIR -62 200 13 302 331 157 12 chr20 1078039 1078211 -65589794 - L1ME LINE L1 -294 5827 5631 3056 143 67 24 chr20 1078215 1078885 -65589120 - Charlie1a DNA MER1_type -8 1447 749 1095 190 55 51 chr20 1078888 1079162 -65588843 - Charlie1a DNA MER1_type -809 646 372 1703 188 40 0 chr20 1079164 1079441 -65588564 + AluJb SINE Alu 1 288 -24 1151 158 0 0 chr20 1079441 1079606 -65588399 + AluJb SINE Alu 134 298 -14 1197 217 84 10 chr20 1079606 1079905 -65588100 - Charlie1a DNA MER1_type -1073 382 62 1180 248 55 37 chr20 1079948 1080436 -65587569 - L1ME LINE L1 -766 5380 4884 432 254 87 76 chr20 1080572 1080757 -65587248 - MIR SINE MIR -10 252 66 552 307 78 10 chr20 1080766 1080974 -65587031 - MIR SINE MIR -1 261 41 507 306 48 34 chr20 1081538 1081744 -65586261 - MIR SINE MIR -4 258 50 699 294 81 20 chr20 1081958 1082254 -65585751 - L2 LINE L2 -556 2758 2445 479 306 60 28 chr20 1082255 1082503 -65585502 - L1ME LINE L1 -376 5745 5490 559 251 147 20 chr20 1082628 1082961 -65585044 - MLT1E3 LTR MaLR -26 479 139 369 232 86 78 chr20 1083080 1083311 -65584694 - MLT1E3-int LTR MaLR -30 1705 1107 454 266 175 7 chr20 1084020 1084163 -65583842 + MER5A DNA MER1_type 22 188 -1 2703 238 102 26 chr20 1085108 1086310 -65581695 + L1ME LINE L1 396 1687 -4393 3043 78 34 25 chr20 1086311 1086749 -65581256 - MLT2A1 LTR ERVL -2 442 1 6589 48 12 11 chr20 1086750 1087605 -65580400 - HERVL-A1 LTR ERVL -1 5653 4798 202 211 0 0 chr20 1087649 1087687 -65580318 + L2 LINE L2 3216 3253 -19 1420 113 0 0 chr20 1088309 1088494 -65579511 + AluSg/x SINE Alu 123 307 -3 24 0 0 0 chr20 1088600 1088624 -65579381 + AT_rich Low_complexity Low_complexity 1 24 0 1089 201 72 5 chr20 1088664 1088873 -65579132 - AluJo SINE Alu -89 223 1 266 145 24 145 chr20 1089676 1089759 -65578246 - L1ME LINE L1 -244 5877 5805 24 32 0 0 chr20 1089837 1089868 -65578137 + AT_rich Low_complexity Low_complexity 1 31 0 548 271 8 0 chr20 1091950 1092083 -65575922 + MER106A DNA MER1_type 29 162 -74 33 25 0 0 chr20 1092290 1092330 -65575675 + AT_rich Low_complexity Low_complexity 1 40 0 183 243 0 0 chr20 1093924 1093961 -65574044 - L2 LINE L2 -716 2598 2562 426 310 120 0 chr20 1094164 1094322 -65573683 - MIR SINE MIR -68 194 18 337 336 60 0 chr20 1095255 1095404 -65572601 + MIR3 SINE MIR 42 199 -9 211 342 34 43 chr20 1095689 1095806 -65572199 + MIR3 SINE MIR 15 130 -78 3335 159 70 32 chr20 1096744 1097484 -65570521 - L1MB7 LINE L1 0 6184 5417 209 268 141 78 chr20 1099368 1099510 -65568495 + MER5A DNA MER1_type 34 184 -5 532 169 208 8 chr20 1099551 1099681 -65568324 + MER5A DNA MER1_type 28 183 -6 181 259 74 19 chr20 1099651 1099705 -65568300 - L2 LINE L2 -2075 1239 1183 * 246 301 97 29 chr20 1099904 1100007 -65567998 - MIR SINE MIR -72 190 81 184 94 0 31 chr20 1100380 1100412 -65567593 - MIR SINE MIR -189 73 43 264 261 84 24 chr20 1100803 1100944 -65567061 - MIR3 SINE MIR -47 161 47 235 192 270 11 chr20 1101376 1101473 -65566532 + MIR SINE MIR 85 199 -9 761 257 16 5 chr20 1101662 1101849 -65566156 + MIR SINE MIR 53 241 -21 676 162 34 0 chr20 1102178 1102295 -65565710 - AluJo/FRAM SINE Alu -1 311 191 695 202 0 0 chr20 1102296 1102410 -65565595 - FLAM_A SINE Alu -19 114 1 201 39 0 0 chr20 1102447 1102473 -65565532 + (GTTTG)n Simple_repeat Simple_repeat 1 26 0 270 138 292 0 chr20 1102939 1103004 -65565001 + L2 LINE L2 3230 3313 0 480 251 133 5 chr20 1103229 1103424 -65564581 + MER102b DNA MER1_type 122 341 0 334 254 183 24 chr20 1104000 1104126 -65563879 - MIR SINE MIR -1 261 116 230 227 0 15 chr20 1104172 1104238 -65563767 + C-rich Low_complexity Low_complexity 5 69 0 619 254 57 17 chr20 1104599 1104776 -65563229 - MIR SINE MIR -3 259 76 211 260 237 45 chr20 1105122 1105299 -65562706 - L3 LINE CR1 -20 1557 1347 281 256 73 0 chr20 1105571 1105653 -65562352 - MIR SINE MIR -91 117 30 206 349 0 0 chr20 1105939 1106002 -65562003 + (TG)n Simple_repeat Simple_repeat 2 64 0 1512 291 76 17 chr20 1106566 1107080 -65560925 - L2 LINE L2 0 3313 2725 469 277 136 0 chr20 1107080 1107235 -65560770 - MER69A DNA AcHobo -1 176 1 1512 291 76 17 chr20 1107235 1107586 -65560419 - L2 LINE L2 -588 2725 2396 686 220 38 25 chr20 1107638 1107797 -65560208 - MIR SINE MIR -76 186 26 339 213 27 0 chr20 1109651 1109726 -65558279 - MIR3 SINE MIR -23 185 109 415 301 68 17 chr20 1111175 1111351 -65556654 + MIR SINE MIR 55 239 -23 577 236 93 25 chr20 1111397 1111558 -65556447 + MIR SINE MIR 51 222 -40 490 254 75 79 chr20 1112186 1112465 -65555540 + MER102b DNA MER1_type 13 290 -51 372 22 0 0 chr20 1112702 1112747 -65555258 + (TG)n Simple_repeat Simple_repeat 2 46 0 185 0 0 39 chr20 1112770 1112796 -65555209 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 363 96 0 0 chr20 1114016 1114068 -65553937 + (CA)n Simple_repeat Simple_repeat 1 52 0 23 0 0 0 chr20 1114591 1114614 -65553391 + GC_rich Low_complexity Low_complexity 1 23 0 247 218 0 39 chr20 1114827 1114905 -65553100 + G-rich Low_complexity Low_complexity 5 79 0 21 36 0 0 chr20 1115105 1115133 -65552872 + GC_rich Low_complexity Low_complexity 1 28 0 207 135 39 58 chr20 1115193 1115245 -65552760 + C-rich Low_complexity Low_complexity 3 53 0 241 284 37 102 chr20 1115461 1115676 -65552329 + L2 LINE L2 2987 3187 -85 265 319 0 0 chr20 1115748 1115820 -65552185 + MER96 DNA MER1_type? 1 72 -103 324 287 166 0 chr20 1116267 1116424 -65551581 + MIR SINE MIR 31 213 -49 * 1238 257 81 28 chr20 1116420 1116817 -65551188 + L2 LINE L2 2891 3308 -5 614 346 42 34 chr20 1116841 1117334 -65550671 - L2 LINE L2 -67 3205 2714 3778 184 47 49 chr20 1117445 1117567 -65550438 + L1MC3 LINE L1 6496 6617 -1168 252 0 0 0 chr20 1117567 1117595 -65550410 + (CA)n Simple_repeat Simple_repeat 2 29 0 3778 184 47 49 chr20 1117595 1118907 -65549098 + L1MC3 LINE L1 6617 7704 -81 2055 159 20 30 chr20 1118907 1119310 -65548695 + MSTB LTR MaLR 1 399 -27 1164 111 0 0 chr20 1119321 1119376 -65548629 + (TTC)n Simple_repeat Simple_repeat 1 235 0 1164 111 0 0 chr20 1119376 1119556 -65548449 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1698 183 10 10 chr20 1119619 1119914 -65548091 - AluJo SINE Alu -17 295 1 254 105 0 0 chr20 1119915 1119953 -65548052 + MSTB LTR MaLR 395 432 0 409 111 0 0 chr20 1119955 1120018 -65547987 + L1MC3 LINE L1 7702 7764 -21 200 358 98 24 chr20 1120432 1120555 -65547450 - L2 LINE L2 -572 2742 2611 893 245 176 31 chr20 1120729 1121233 -65546772 - MLT1G LTR MaLR 0 590 13 2475 60 0 7 chr20 1121353 1121652 -65546353 + AluY SINE Alu 1 297 -14 1561 259 63 11 chr20 1121742 1122205 -65545800 + MLT1J LTR MaLR 7 493 -18 2376 107 0 0 chr20 1122227 1122536 -65545469 + AluSq SINE Alu 1 309 -4 634 238 94 30 chr20 1122816 1123051 -65544954 - MIR SINE MIR -5 257 8 1191 220 91 49 chr20 1124297 1124359 -65543646 - MLT1A1 LTR MaLR 0 365 307 1671 194 17 3 chr20 1124359 1124658 -65543347 + AluJo SINE Alu 1 303 -9 1191 220 91 49 chr20 1124658 1124945 -65543060 - MLT1A1 LTR MaLR -58 307 1 899 268 197 29 chr20 1124958 1125369 -65542636 - LTR16C LTR ERVL -9 482 3 1101 227 196 44 chr20 1126093 1126502 -65541503 - MLT1J LTR MaLR -40 471 1 42 47 0 24 chr20 1126525 1126566 -65541439 + AT_rich Low_complexity Low_complexity 1 41 -42 1853 153 43 0 chr20 1126566 1126848 -65541157 - AluSx SINE Alu -18 294 1 42 47 0 24 chr20 1126848 1126891 -65541114 + AT_rich Low_complexity Low_complexity 41 83 0 181 128 43 0 chr20 1126907 1126954 -65541051 + (TA)n Simple_repeat Simple_repeat 2 50 0 326 252 36 18 chr20 1127588 1127699 -65540306 + MIR SINE MIR 49 161 -101 544 191 63 32 chr20 1127748 1127874 -65540131 - MER119 DNA MER1_type 0 583 454 495 278 63 0 chr20 1127874 1128000 -65540005 - MER119 DNA MER1_type -449 134 1 220 283 43 0 chr20 1128000 1128092 -65539913 + MIR SINE MIR 164 259 -3 604 247 66 52 chr20 1128367 1128658 -65539347 + MLT1H LTR MaLR 64 376 -33 314 173 49 12 chr20 1129130 1129211 -65538794 - MIR SINE MIR -89 119 36 2017 191 13 64 chr20 1129500 1129970 -65538035 - MER41B LTR ERV1 -33 602 157 2330 122 0 0 chr20 1130183 1130486 -65537519 + AluSq SINE Alu 1 303 -10 1678 148 0 19 chr20 1130558 1130821 -65537184 - AluJo SINE Alu -54 258 1 415 269 97 7 chr20 1130875 1131020 -65536985 - L1MEd LINE L1 -5365 754 597 26 23 0 23 chr20 1131089 1131112 -65536893 + AT_rich Low_complexity Low_complexity 1 24 -19 1897 88 0 4 chr20 1131112 1131352 -65536653 - AluSq SINE Alu -74 239 1 26 23 0 23 chr20 1131352 1131372 -65536633 + AT_rich Low_complexity Low_complexity 24 43 0 484 261 39 20 chr20 1131412 1131565 -65536440 + L2 LINE L2 3158 3313 0 4194 90 15 0 chr20 1131591 1132137 -65535868 + MER41A LTR ERV1 1 554 0 384 251 64 98 chr20 1132261 1132496 -65535509 - MLT1L LTR MaLR -200 415 189 466 260 27 7 chr20 1133330 1133476 -65534529 + MIR SINE MIR 81 229 -33 264 239 14 14 chr20 1133527 1133598 -65534407 - LTR16C LTR ERVL 0 491 421 2338 98 0 7 chr20 1134513 1134819 -65533186 - AluSx SINE Alu -8 304 1 1573 149 38 8 chr20 1135227 1135510 -65532495 + AluJo SINE Alu 36 312 0 2509 173 17 4 chr20 1135585 1136058 -65531947 - Charlie1b DNA MER1_type 0 523 45 210 329 40 0 chr20 1136069 1136145 -65531860 - MIR SINE MIR -68 194 116 286 318 9 0 chr20 1136594 1136701 -65531304 + MIR SINE MIR 30 137 -71 336 256 107 135 chr20 1136994 1137462 -65530543 + MLT1K LTR MaLR 132 586 -2 2080 207 154 24 chr20 1137871 1138532 -65529473 + LTR50 LTR ERVL 49 795 0 357 223 83 68 chr20 1139384 1139673 -65528332 - MLT1F1 LTR MaLR -13 554 185 243 266 0 16 chr20 1139851 1139915 -65528090 + CT-rich Low_complexity Low_complexity 3 65 0 192 97 0 0 chr20 1139915 1139946 -65528059 + (CAT)n Simple_repeat Simple_repeat 3 33 0 801 264 81 4 chr20 1139947 1140182 -65527823 + MIR SINE MIR 10 262 0 3299 93 2 23 chr20 1140202 1140685 -65527320 - L1PA8 LINE L1 -4 6168 5696 2307 89 3 0 chr20 1140691 1140984 -65527021 - AluSp SINE Alu -19 294 1 952 241 31 0 chr20 1141005 1141233 -65526772 + MIR SINE MIR 2 236 -26 338 355 44 15 chr20 1141303 1141506 -65526499 - MIR SINE MIR -52 210 2 1128 191 131 72 chr20 1141823 1142178 -65525827 - MLT1D LTR MaLR -106 399 34 190 265 174 15 chr20 1142643 1142775 -65525230 + MIR SINE MIR 32 184 -78 418 303 8 8 chr20 1142854 1142973 -65525032 - L2 LINE L2 -4 3309 3191 2503 210 121 21 chr20 1143107 1143793 -65524212 - MER69 DNA AcHobo -2 2524 1757 3008 162 19 47 chr20 1143793 1144366 -65523639 - MER41D LTR ERV1 0 557 1 2503 210 121 21 chr20 1144366 1144423 -65523582 - MER69 DNA AcHobo -769 1757 1707 * 3331 249 66 16 chr20 1144419 1145284 -65522721 - MER69 DNA AcHobo -1614 912 5 190 288 63 54 chr20 1145289 1145400 -65522605 - L2 LINE L2 -469 2845 2734 1562 191 41 61 chr20 1145417 1146181 -65521824 + LTR13 LTR ERVK 1 800 -207 42006 62 9 6 chr20 1146186 1150755 -65517250 + L1PA5 LINE L1 4 4558 -1596 983 59 46 0 chr20 1150755 1150908 -65517097 + CT-rich Low_complexity Low_complexity 2 161 0 2400 68 0 0 chr20 1150908 1151187 -65516818 - AluY SINE Alu -32 279 1 42006 62 9 6 chr20 1151187 1152616 -65515389 + L1PA5 LINE L1 4558 6025 -129 2274 81 0 17 chr20 1152616 1152913 -65515092 + AluSp SINE Alu 1 292 -21 42006 62 9 6 chr20 1152913 1153043 -65514962 + L1PA5 LINE L1 6025 6153 -1 1401 124 13 13 chr20 1153043 1153269 -65514736 + LTR13 LTR ERVK 782 1007 0 2173 99 7 0 chr20 1153293 1153577 -65514428 - AluSx SINE Alu -26 286 1 499 128 0 26 chr20 1153620 1153698 -65514307 - MER1B DNA MER1_type 0 329 254 1141 117 6 0 chr20 1153699 1153870 -65514135 - MER1B DNA MER1_type -75 222 51 339 257 89 14 chr20 1153890 1154104 -65513901 - L2 LINE L2 -634 2680 2451 291 303 62 51 chr20 1154154 1154332 -65513673 + MIR SINE MIR 35 214 -48 186 43 0 0 chr20 1154560 1154583 -65513422 + (TAA)n Simple_repeat Simple_repeat 1 23 0 458 285 86 5 chr20 1154584 1154770 -65513235 - MIR SINE MIR -8 254 54 180 0 0 0 chr20 1155051 1155071 -65512934 + (CCG)n Simple_repeat Simple_repeat 3 22 0 368 224 14 41 chr20 1155092 1155239 -65512766 + (CCCCG)n Simple_repeat Simple_repeat 2 144 0 344 136 6 62 chr20 1155264 1155441 -65512564 + (CCCCG)n Simple_repeat Simple_repeat 5 171 0 234 252 0 73 chr20 1155940 1156063 -65511942 + (CCCCG)n Simple_repeat Simple_repeat 5 118 0 2158 93 0 3 chr20 1156332 1156622 -65511383 - AluSx SINE Alu -23 289 1 317 279 23 0 chr20 1158507 1158593 -65509412 - MIR SINE MIR -17 245 158 430 250 192 0 chr20 1158659 1158815 -65509190 + MIR SINE MIR 64 249 -13 1055 68 0 0 chr20 1158819 1158951 -65509054 + AluSg/x SINE Alu 176 307 -5 187 291 244 0 chr20 1158972 1159058 -65508947 - MIR SINE MIR -136 126 20 268 307 24 24 chr20 1159984 1160111 -65507894 + L2 LINE L2 3179 3305 -8 843 318 110 15 chr20 1160225 1160862 -65507143 - L2 LINE L2 -8 3305 2599 2185 253 114 39 chr20 1161244 1162133 -65505872 - L2 LINE L2 0 3313 2493 1621 141 14 186 chr20 1162133 1162574 -65505431 + MLT1A1 LTR MaLR 1 365 0 2185 253 114 39 chr20 1162574 1162891 -65505114 - L2 LINE L2 -820 2493 2201 2114 163 14 17 chr20 1162891 1163253 -65504752 - MLT1A1 LTR MaLR -4 361 1 2185 253 114 39 chr20 1163253 1163345 -65504660 - L2 LINE L2 -1112 2201 1899 257 238 111 63 chr20 1163805 1163931 -65504074 - L2 LINE L2 -13 3300 3169 1715 145 40 27 chr20 1164157 1164454 -65503551 - AluJo SINE Alu -11 301 1 798 174 192 25 chr20 1164775 1165051 -65502954 - MER5C DNA MER1_type -2 322 1 2196 122 0 0 chr20 1165184 1165479 -65502526 - AluSx SINE Alu -17 295 1 198 0 0 0 chr20 1165527 1165549 -65502456 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 421 265 45 8 chr20 1165975 1166107 -65501898 + MIR SINE MIR 40 176 -86 568 247 6 25 chr20 1166701 1166863 -65501142 + MIR SINE MIR 2 160 -102 273 254 21 113 chr20 1167284 1167426 -65500579 + MIR3 SINE MIR 77 205 -3 30 0 0 0 chr20 1168000 1168030 -65499975 + AT_rich Low_complexity Low_complexity 1 30 0 2052 125 0 10 chr20 1168230 1168538 -65499467 - AluSx SINE Alu 0 305 1 1790 185 81 49 chr20 1170012 1170482 -65497523 + MER66B LTR ERV1 1 485 -1 1862 174 0 0 chr20 1171646 1171944 -65496061 - AluJb SINE Alu -14 298 1 212 0 36 0 chr20 1172298 1172326 -65495679 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 28 61 0 0 chr20 1174048 1174097 -65493908 + AT_rich Low_complexity Low_complexity 1 49 0 213 39 0 0 chr20 1177457 1177483 -65490522 + (A)n Simple_repeat Simple_repeat 1 26 0 611 290 58 33 chr20 1178455 1178731 -65489274 - HAL1 LINE L1 0 2507 2225 641 169 136 32 chr20 1178777 1178931 -65489074 - MLT1J LTR MaLR 0 511 342 692 226 167 0 chr20 1178988 1179174 -65488831 - MLT1J LTR MaLR -294 217 1 3267 36 0 0 chr20 1179267 1179652 -65488353 - L1PA5 LINE L1 0 6154 5770 3573 37 103 0 chr20 1179665 1180121 -65487884 - L1PA5 LINE L1 0 6154 5652 1217 252 62 128 chr20 1180248 1180898 -65487107 - HAL1 LINE L1 -568 1939 1297 366 216 0 14 chr20 1180898 1180972 -65487033 - AluJo SINE Alu -164 138 66 1217 252 62 128 chr20 1180972 1181244 -65486761 - HAL1 LINE L1 -1210 1297 1009 638 207 48 85 chr20 1181256 1181507 -65486498 - L1ME1 LINE L1 -1 6177 5928 973 310 64 34 chr20 1181539 1182072 -65485933 - HAL1 LINE L1 -1549 958 410 567 219 206 48 chr20 1182075 1182386 -65485619 - HAL1 LINE L1 -2136 371 12 2175 122 7 0 chr20 1182705 1183008 -65484997 - AluSx SINE Alu -7 305 1 811 173 8 8 chr20 1184076 1184209 -65483796 - FLAM_A SINE Alu 0 133 1 2589 213 49 11 chr20 1184982 1185611 -65482394 - L1ME1 LINE L1 0 6560 5908 2098 154 68 0 chr20 1185623 1186005 -65482000 - L1MD2 LINE L1 -14 6345 5938 363 224 0 0 chr20 1186005 1186081 -65481924 - L1ME1 LINE L1 -1815 4725 4650 2996 132 34 38 chr20 1186081 1186121 -65481884 - L1MB7 LINE L1 -253 5931 5892 1972 115 0 11 chr20 1186121 1186391 -65481614 - AluSq SINE Alu -45 268 2 2996 132 34 38 chr20 1186391 1186902 -65481103 - L1MB7 LINE L1 -292 5892 5382 2202 213 92 14 chr20 1186906 1187623 -65480382 - L1ME1 LINE L1 -2391 4149 3377 254 194 32 16 chr20 1187624 1187686 -65480319 - L1ME1 LINE L1 -3101 3439 3377 284 253 25 13 chr20 1187735 1187814 -65480191 - L1ME1 LINE L1 -3086 3454 3375 275 247 26 13 chr20 1187861 1187938 -65480067 - L1ME1 LINE L1 -3086 3454 3377 230 234 31 16 chr20 1187939 1188003 -65480002 - L1ME1 LINE L1 -3101 3439 3375 225 242 30 15 chr20 1187998 1188064 -65479941 - L1ME1 LINE L1 -3097 3443 3377 * 275 253 25 13 chr20 1188050 1188129 -65479876 - L1ME1 LINE L1 -3086 3454 3375 285 253 25 13 chr20 1188176 1188255 -65479750 - L1ME1 LINE L1 -3086 3454 3375 255 279 25 13 chr20 1188302 1188381 -65479624 - L1ME1 LINE L1 -3086 3454 3375 * 263 260 26 13 chr20 1188365 1188442 -65479563 - L1ME1 LINE L1 -3086 3454 3377 253 212 30 15 chr20 1188439 1188505 -65479500 - L1ME1 LINE L1 -3097 3443 3377 * 269 253 25 13 chr20 1188491 1188570 -65479435 - L1ME1 LINE L1 -3086 3454 3375 263 260 26 13 chr20 1188554 1188631 -65479374 - L1ME1 LINE L1 -3086 3454 3377 * 268 234 26 13 chr20 1188750 1188827 -65479178 - L1ME1 LINE L1 -3097 3443 3366 254 239 28 14 chr20 1188871 1188942 -65479063 - L1ME1 LINE L1 -3092 3448 3377 * 284 253 25 13 chr20 1188928 1189007 -65478998 - L1ME1 LINE L1 -3086 3454 3375 263 260 26 13 chr20 1188991 1189068 -65478937 - L1ME1 LINE L1 -3086 3454 3377 * 987 232 67 20 chr20 1189187 1189484 -65478521 - L1ME1 LINE L1 -3097 3443 3133 2450 137 15 25 chr20 1189484 1189885 -65478120 - Tigger2a DNA MER2_type -36 398 2 2327 213 54 54 chr20 1189886 1190568 -65477437 - L1ME1 LINE L1 -3465 3075 2394 1746 170 6 46 chr20 1190568 1190891 -65477114 - AluSx SINE Alu -2 310 1 2327 213 54 54 chr20 1190891 1191513 -65476492 - L1ME1 LINE L1 -4146 2394 1774 1955 150 7 13 chr20 1191513 1191813 -65476192 - AluJo SINE Alu -14 298 1 2327 213 54 54 chr20 1191813 1191947 -65476058 - L1ME1 LINE L1 -4766 1774 1641 322 293 20 0 chr20 1192434 1192533 -65475472 - L1ME1 LINE L1 -5923 607 507 767 137 65 0 chr20 1192920 1193044 -65474961 + FLAM_C SINE Alu 1 132 -11 1474 243 180 5 chr20 1193775 1194291 -65473714 - L2 LINE L2 -2 3311 2711 256 356 34 25 chr20 1194349 1194467 -65473538 - MIR SINE MIR -72 136 18 352 179 8 0 chr20 1194751 1194834 -65473171 - MIR SINE MIR -58 150 80 222 282 94 68 chr20 1196305 1196422 -65471583 + MIR3 SINE MIR 44 163 -45 427 215 83 56 chr20 1196628 1196772 -65471233 + MIR SINE MIR 96 243 -19 192 270 101 11 chr20 1197423 1197512 -65470493 + L2 LINE L2 3171 3267 -5 215 288 0 17 chr20 1197619 1197678 -65470327 + (TTG)n Simple_repeat Simple_repeat 1 58 0 615 267 6 6 chr20 1197907 1198068 -65469937 + MIR3 SINE MIR 35 195 -13 301 257 0 0 chr20 1198169 1198243 -65469762 - MIR SINE MIR -112 150 77 327 308 70 27 chr20 1198567 1198752 -65469253 - MIR SINE MIR -11 251 59 218 309 52 10 chr20 1198756 1198853 -65469152 + MIR3 SINE MIR 12 112 -96 21 0 0 0 chr20 1199253 1199274 -65468731 + AT_rich Low_complexity Low_complexity 1 21 0 205 189 0 0 chr20 1199587 1199624 -65468381 - MIR SINE MIR -91 117 81 506 243 95 6 chr20 1199924 1200093 -65467912 + MIR3 SINE MIR 4 187 -21 1957 137 0 0 chr20 1200115 1200392 -65467613 - AluSx SINE Alu -1 311 35 213 273 42 50 chr20 1200958 1201101 -65466904 + MIR SINE MIR 45 185 -67 665 254 123 17 chr20 1201181 1201417 -65466588 - Charlie8 DNA MER1_type -2154 263 3 222 188 0 21 chr20 1202228 1202276 -65465729 - L2 LINE L2 -3 3269 3223 216 293 49 12 chr20 1202420 1202502 -65465503 + MIR SINE MIR 152 236 -26 442 309 13 7 chr20 1202615 1202764 -65465241 - MIR SINE MIR -111 151 2 218 287 43 21 chr20 1202864 1202958 -65465047 - MIR SINE MIR -122 140 45 246 276 113 81 chr20 1202986 1203269 -65464736 + L3 LINE CR1 1236 1527 -50 269 301 98 0 chr20 1203942 1204065 -65463940 + MIR SINE MIR 36 170 -92 274 291 102 33 chr20 1204284 1204416 -65463589 - MIR SINE MIR -65 143 4 361 259 11 136 chr20 1205172 1205451 -65462554 + MIR3 SINE MIR 7 255 -7 342 294 26 46 chr20 1205526 1205679 -65462326 + L3 LINE CR1 1427 1576 -1 237 254 127 0 chr20 1205942 1206052 -65461953 + L2 LINE L2 3188 3311 -2 745 163 0 8 chr20 1206136 1206648 -65461357 + (TG)n Simple_repeat Simple_repeat 1 507 0 782 157 6 0 chr20 1206688 1206866 -65461139 + (TG)n Simple_repeat Simple_repeat 2 180 0 684 141 0 32 chr20 1206881 1207066 -65460939 + (TG)n Simple_repeat Simple_repeat 2 180 0 3256 209 67 29 chr20 1207161 1207460 -65460545 - L1ME1 LINE L1 -5 6161 5875 1753 102 0 4 chr20 1207460 1207695 -65460310 - AluSg/x SINE Alu -4 306 73 3256 209 67 29 chr20 1207695 1208309 -65459696 - L1ME1 LINE L1 -291 5875 5201 650 114 0 70 chr20 1208400 1208514 -65459491 - AluJb SINE Alu -8 304 199 297 245 115 70 chr20 1209310 1209478 -65458527 - MIR SINE MIR -62 146 3 575 283 140 21 chr20 1210908 1211187 -65456818 + L1ME4a LINE L1 5527 5838 -283 241 330 17 34 chr20 1212045 1212163 -65455842 + MIR SINE MIR 30 145 -63 541 259 89 49 chr20 1212252 1212476 -65455529 - Charlie8 DNA MER1_type -2184 233 1 1355 246 130 27 chr20 1213127 1214057 -65453948 - L2 LINE L2 -2 3311 2301 410 286 73 68 chr20 1214271 1214505 -65453500 - MIR SINE MIR 0 262 28 2446 82 16 0 chr20 1214599 1214904 -65453101 + AluSg SINE Alu 1 310 0 364 276 59 26 chr20 1216250 1216402 -65451603 + MIR3 SINE MIR 37 193 -15 2237 122 0 3 chr20 1217394 1217706 -65450299 - AluSx SINE Alu -1 311 1 405 0 0 0 chr20 1218297 1218342 -65449663 + (CA)n Simple_repeat Simple_repeat 2 46 0 1387 169 73 15 chr20 1218352 1218624 -65449381 + AluJo SINE Alu 5 292 -20 3866 160 30 32 chr20 1218661 1218706 -65449299 - L1MB7 LINE L1 -16 6168 6124 2132 116 0 26 chr20 1218706 1219009 -65448996 + AluSx SINE Alu 1 295 -17 3866 160 30 32 chr20 1219009 1219702 -65448303 - L1MB7 LINE L1 -60 6124 5432 195 195 24 0 chr20 1220685 1220726 -65447279 - MIR SINE MIR -57 151 110 251 246 35 0 chr20 1220785 1220842 -65447163 - MIR3 SINE MIR -6 202 144 207 339 152 11 chr20 1221247 1221530 -65446475 + L2 LINE L2 2540 2862 -452 605 259 25 20 chr20 1221769 1221970 -65446035 - MIR SINE MIR -18 244 43 186 231 15 46 chr20 1222902 1222967 -65445038 + MIR SINE MIR 34 96 -166 625 280 30 0 chr20 1223617 1223817 -65444188 + MIR SINE MIR 47 252 -10 281 256 112 8 chr20 1224785 1224910 -65443095 + MIR3 SINE MIR 65 202 -6 190 311 133 22 chr20 1225275 1225410 -65442595 + MIR SINE MIR 67 216 -46 354 211 26 0 chr20 1226153 1226229 -65441776 + MIR SINE MIR 77 154 -108 425 302 149 34 chr20 1226237 1226558 -65441447 - MLT1J LTR MaLR -32 479 122 260 264 69 0 chr20 1226589 1226661 -65441344 - MLT1L LTR MaLR -536 79 3 369 0 0 0 chr20 1227589 1227630 -65440375 + (TG)n Simple_repeat Simple_repeat 2 42 0 232 290 130 29 chr20 1228942 1229080 -65438925 + MIR SINE MIR 81 232 -30 883 194 5 5 chr20 1230297 1230483 -65437522 - L1MB7 LINE L1 0 6184 5999 286 212 12 12 chr20 1230532 1230617 -65437388 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1230599 1230684 -65437321 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1230666 1230751 -65437254 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1230800 1230885 -65437120 - L1MB7 LINE L1 -101 6083 5999 286 224 12 12 chr20 1230867 1230952 -65437053 - L1MB7 LINE L1 -101 6083 5999 * 299 224 12 12 chr20 1230934 1231019 -65436986 - L1MB7 LINE L1 -101 6083 5999 * 301 212 12 12 chr20 1231001 1231086 -65436919 - L1MB7 LINE L1 -101 6083 5999 286 224 12 12 chr20 1231068 1231153 -65436852 - L1MB7 LINE L1 -101 6083 5999 * 301 212 12 12 chr20 1231135 1231220 -65436785 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1231202 1231287 -65436718 - L1MB7 LINE L1 -101 6083 5999 * 286 212 12 12 chr20 1231269 1231354 -65436651 - L1MB7 LINE L1 -101 6083 5999 * 809 160 28 28 chr20 1231336 1231517 -65436488 - L1MB7 LINE L1 -101 6083 5903 365 292 65 13 chr20 1231937 1232091 -65435914 + L2 LINE L2 2866 3027 -245 241 163 0 20 chr20 1239524 1239573 -65428432 + G-rich Low_complexity Low_complexity 2 49 0 325 261 0 109 chr20 1240617 1240683 -65427322 - MIR SINE MIR -3 259 210 1855 147 13 7 chr20 1240683 1240982 -65427023 - AluJb SINE Alu -11 301 1 325 261 0 109 chr20 1240982 1241034 -65426971 - MIR SINE MIR -52 210 154 1124 241 20 3 chr20 1242688 1242991 -65425014 + L1MD2 LINE L1 4076 4383 -1763 1938 139 7 7 chr20 1242991 1243346 -65424659 + AluSx SINE Alu 1 355 0 829 144 0 8 chr20 1243395 1243527 -65424478 + FLAM_C SINE Alu 1 131 -2 2058 232 92 12 chr20 1243549 1244032 -65423973 + L1MD2 LINE L1 4387 4948 -1198 1809 149 3 0 chr20 1244032 1244345 -65423660 + AluSx SINE Alu 1 314 0 2058 232 92 12 chr20 1244345 1244581 -65423424 + L1MD2 LINE L1 4948 5164 -982 300 160 120 0 chr20 1244584 1244659 -65423346 + L1MD2 LINE L1 5204 5287 -859 1261 140 4 68 chr20 1244673 1244909 -65423096 + AluJb SINE Alu 85 305 -7 3849 180 44 21 chr20 1244910 1245183 -65422822 + L1MD2 LINE L1 5311 5576 -783 2052 128 0 0 chr20 1245183 1245472 -65422533 - AluJb SINE Alu -21 291 3 3849 180 44 21 chr20 1245472 1246011 -65421994 + L1MD2 LINE L1 5576 6142 -217 465 277 40 0 chr20 1246009 1246157 -65421848 + L1MD3 LINE L1 7832 7985 -10 * 21 0 0 0 chr20 1246168 1246189 -65421816 + AT_rich Low_complexity Low_complexity 1 21 0 1000 230 0 0 chr20 1247625 1247821 -65420184 + MLT1B LTR MaLR 191 386 -4 246 309 39 1 chr20 1248171 1248276 -65419729 - MIR SINE MIR -87 121 16 622 302 95 59 chr20 1250285 1250509 -65417496 + L2 LINE L2 2583 2798 -474 312 315 129 46 chr20 1250509 1250811 -65417194 + MER102a DNA MER1_type 1 327 -3 622 302 95 59 chr20 1250811 1251214 -65416791 + L2 LINE L2 2798 3234 -38 1876 162 3 0 chr20 1251353 1251655 -65416350 - AluJo SINE Alu -9 303 1 582 268 70 29 chr20 1251658 1251901 -65416104 + MER102b DNA MER1_type 70 322 -19 972 203 143 4 chr20 1252432 1252698 -65415307 + MER2 DNA MER2_type 43 345 0 204 185 148 0 chr20 1252769 1252823 -65415182 - L2 LINE L2 -1 3271 3210 287 293 61 100 chr20 1252856 1253136 -65414869 + L2 LINE L2 3004 3272 0 832 234 107 144 chr20 1253146 1253800 -65414205 + MER20B DNA MER1_type 32 661 -122 210 304 121 29 chr20 1255002 1255209 -65412796 + L2 LINE L2 2344 2569 -745 205 239 0 0 chr20 1255454 1255500 -65412505 - L2 LINE L2 -2 3311 3266 295 269 244 0 chr20 1255536 1255655 -65412350 + L2 LINE L2 3165 3312 -1 378 214 50 94 chr20 1256444 1256603 -65411402 + MIR SINE MIR 108 259 -3 755 300 79 30 chr20 1256604 1257196 -65410809 - L2 LINE L2 0 3313 2614 207 330 82 0 chr20 1257365 1257462 -65410543 - MIR SINE MIR -64 144 40 234 122 61 20 chr20 1258272 1258321 -65409684 + L1ME LINE L1 5599 5649 -472 353 286 43 87 chr20 1258560 1258721 -65409284 + L1ME4a LINE L1 5956 6109 -12 334 227 69 118 chr20 1259198 1259401 -65408604 - MIR SINE MIR 0 262 70 1698 183 0 0 chr20 1260279 1260568 -65407437 - AluJb SINE Alu -23 289 1 380 315 55 6 chr20 1260661 1260842 -65407163 - MER117 DNA MER1_type -3 194 5 349 193 149 79 chr20 1260842 1260927 -65407078 + L2 LINE L2 3151 3247 -25 1442 144 16 84 chr20 1260927 1261247 -65406758 - AluJb SINE Alu -14 298 1 349 193 149 79 chr20 1261247 1261275 -65406730 + L2 LINE L2 3247 3272 0 426 269 170 0 chr20 1261366 1261507 -65406498 + MIR SINE MIR 77 241 -21 227 276 52 0 chr20 1261729 1261787 -65406218 - L2 LINE L2 -16 3256 3196 321 235 0 35 chr20 1261956 1262041 -65405964 - MLT1J LTR MaLR -350 161 80 211 286 16 0 chr20 1262073 1262136 -65405869 + MIR3 SINE MIR 109 172 -36 1080 288 87 5 chr20 1262301 1262679 -65405326 - MLT1I LTR MaLR 0 409 1 707 212 74 5 chr20 1262873 1263159 -65404846 + MLT1A1 LTR MaLR 30 365 0 208 342 38 0 chr20 1263174 1263253 -65404752 + MIR SINE MIR 117 198 -64 183 100 0 0 chr20 1263843 1263873 -65404132 + (CATGT)n Simple_repeat Simple_repeat 3 32 0 4411 94 3 24 chr20 1263952 1264338 -65403667 + L1PB2 LINE L1 5539 5909 -242 1844 82 0 16 chr20 1264338 1264593 -65403412 - AluSg SINE Alu 0 310 60 4411 94 3 24 chr20 1264593 1264831 -65403174 + L1PB2 LINE L1 5909 6150 -1 221 333 65 0 chr20 1265031 1265124 -65402881 - MIR SINE MIR -65 143 45 187 192 0 151 chr20 1265168 1265241 -65402764 - MIR SINE MIR -118 90 29 234 308 47 9 chr20 1265376 1265483 -65402522 + MIR3 SINE MIR 50 160 -48 566 228 71 3 chr20 1266068 1266253 -65401752 - MIR SINE MIR -7 255 11 249 313 0 61 chr20 1267172 1267287 -65400718 + MIR SINE MIR 22 129 -79 1162 285 106 31 chr20 1267486 1267998 -65400007 + MLT1K LTR MaLR 33 582 -6 1659 152 33 26 chr20 1268082 1268384 -65399621 - AluSx SINE Alu -8 304 1 713 80 30 10 chr20 1268735 1268835 -65399170 - AluSq/x SINE Alu -209 103 2 1915 157 23 0 chr20 1269224 1269529 -65398476 - AluJo SINE Alu 0 312 1 1201 227 134 8 chr20 1269846 1270203 -65397802 - MER97b DNA MER1_type? -632 421 20 202 269 144 10 chr20 1270266 1270370 -65397635 + MIR3 SINE MIR 7 124 -84 231 36 0 0 chr20 1270932 1270960 -65397045 + (CA)n Simple_repeat Simple_repeat 1 28 0 202 231 115 0 chr20 1271623 1271675 -65396330 + L2 LINE L2 3189 3246 -67 2220 75 0 3 chr20 1271751 1272043 -65395962 + AluSq SINE Alu 1 291 -22 1896 167 0 0 chr20 1272108 1272414 -65395591 + AluJb SINE Alu 1 306 -6 207 273 0 0 chr20 1272472 1272516 -65395489 + MER91 DNA MER1_type 1 44 -96 3106 57 16 0 chr20 1272531 1272902 -65395103 - MER51B LTR ERV1 0 377 1 502 271 53 21 chr20 1272916 1273196 -65394809 + L1ME4a LINE L1 5566 5856 -265 431 272 66 92 chr20 1273200 1273428 -65394577 + L1ME4a LINE L1 5900 6121 0 30 27 0 0 chr20 1273406 1273443 -65394562 + AT_rich Low_complexity Low_complexity 1 37 0 * 1433 189 23 8 chr20 1273806 1274071 -65393934 + MLT1F LTR MaLR 1 269 -273 6034 194 40 17 chr20 1274204 1276609 -65391396 - L1MC2 LINE L1 -146 6592 4136 14842 143 43 42 chr20 1276619 1278707 -65389298 - L1MA3 LINE L1 -10 7714 5630 180 0 0 0 chr20 1278707 1278727 -65389278 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 14842 143 43 42 chr20 1278727 1279110 -65388895 - L1MA3 LINE L1 -2094 5630 5249 1454 108 10 20 chr20 1279110 1279314 -65388691 - AluSq SINE Alu -24 289 88 14842 143 43 42 chr20 1279314 1280930 -65387075 - L1MA3 LINE L1 -2475 5249 3636 1196 55 0 22 chr20 1280930 1281112 -65386893 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1908 151 7 10 chr20 1281114 1281413 -65386592 - AluSx SINE Alu -14 298 1 14842 143 43 42 chr20 1281413 1281968 -65386037 - L1MA3 LINE L1 -4088 3636 3083 1646 179 29 0 chr20 1281968 1282248 -65385757 - AluJb SINE Alu -14 298 11 14842 143 43 42 chr20 1282248 1284555 -65383450 - L1MA3 LINE L1 -4641 3083 9 1057 244 7 21 chr20 1284554 1284833 -65383172 - L1MC2 LINE L1 -2391 4149 3875 * 1530 194 27 36 chr20 1284875 1285240 -65382765 - L1MC2 LINE L1 -3333 3207 2846 1088 209 24 91 chr20 1285267 1285641 -65382364 - L1MC2 LINE L1 -4887 1653 1305 1865 161 0 16 chr20 1285641 1285957 -65382048 + AluJb SINE Alu 1 311 -1 765 162 0 0 chr20 1285960 1286077 -65381928 + FLAM_C SINE Alu 2 118 -25 25 31 0 0 chr20 1286077 1286109 -65381896 + AT_rich Low_complexity Low_complexity 1 32 0 976 237 70 40 chr20 1286110 1286122 -65381883 - L1MC2 LINE L1 -5228 1315 1305 2433 90 3 3 chr20 1286122 1286432 -65381573 - AluSp SINE Alu -3 310 1 976 237 70 40 chr20 1286432 1286816 -65381189 - L1MC2 LINE L1 -5238 1305 907 257 269 21 32 chr20 1287242 1287335 -65380670 - L1MC2 LINE L1 -6098 442 351 681 67 0 0 chr20 1287344 1287434 -65380571 + AluSg/x SINE Alu 214 303 -9 990 278 24 7 chr20 1287449 1287744 -65380261 - L1MC2 LINE L1 -6207 333 34 1404 199 36 48 chr20 1287782 1288058 -65379947 - L1ME1 LINE L1 -6 6160 5887 2393 85 0 0 chr20 1288058 1288351 -65379654 + AluSc SINE Alu 1 293 -16 1404 199 36 48 chr20 1288351 1288430 -65379575 - L1ME1 LINE L1 -279 5887 5809 1500 170 8 133 chr20 1289091 1289467 -65378538 + MER7A DNA MER2_type 1 327 -19 688 137 103 57 chr20 1289830 1290005 -65378000 + Charlie1 DNA MER1_type 2382 2564 -197 1037 214 47 85 chr20 1290006 1290371 -65377634 + HAL1 LINE L1 1297 1647 -860 1125 237 21 21 chr20 1290384 1290667 -65377338 + MLT1H LTR MaLR 15 297 -252 201 162 0 0 chr20 1290987 1291024 -65376981 + A-rich Low_complexity Low_complexity 1 37 0 222 262 84 9 chr20 1291207 1291314 -65376691 + L2 LINE L2 2538 2652 -662 544 209 368 19 chr20 1291328 1291687 -65376318 - MLT1H1 LTR MaLR 0 555 72 841 128 8 0 chr20 1291769 1291886 -65376119 + AluJb SINE Alu 169 286 -26 193 296 37 46 chr20 1292136 1292244 -65375761 + L2 LINE L2 3160 3266 -47 4829 38 24 2 chr20 1293180 1293758 -65374247 + LTR10C LTR ERV1 1 591 0 291 218 100 45 chr20 1294136 1294246 -65373759 + MLT1L LTR MaLR 43 158 -457 1810 178 65 31 chr20 1294305 1294688 -65373317 - MSTD LTR MaLR 0 396 1 1170 224 50 37 chr20 1295065 1295448 -65372557 + LTR37A LTR ERV1 39 426 0 2230 99 3 0 chr20 1295756 1296049 -65371956 + AluY SINE Alu 4 297 -14 2231 162 84 41 chr20 1296057 1296520 -65371485 - MLT1D LTR MaLR 0 505 23 444 253 48 42 chr20 1296616 1296782 -65371223 + L1ME2 LINE L1 5897 6063 -101 208 196 22 0 chr20 1296877 1296923 -65371082 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 23 78 0 0 chr20 1298448 1298499 -65369506 + AT_rich Low_complexity Low_complexity 1 51 0 762 198 17 17 chr20 1299156 1299328 -65368677 - MER5B DNA MER1_type 0 178 7 334 304 74 0 chr20 1300084 1300219 -65367786 + MIR3 SINE MIR 35 179 -29 1198 301 40 0 chr20 1303212 1303610 -65364395 + L1MC/D LINE L1 5405 5818 -1990 2162 111 0 0 chr20 1303621 1303900 -65364105 - AluSq SINE Alu -13 300 22 604 90 0 0 chr20 1303900 1303978 -65364027 - AluS SINE Alu -234 79 2 256 93 5 43 chr20 1305416 1305466 -65362539 - MIR SINE MIR -62 146 101 26 64 0 0 chr20 1305479 1305526 -65362479 + AT_rich Low_complexity Low_complexity 1 47 0 297 268 105 65 chr20 1306861 1307014 -65360991 + MLT1L LTR MaLR 240 398 -217 2450 133 13 5 chr20 1307107 1307490 -65360515 + L1MC1 LINE L1 5939 6324 -9 383 239 0 34 chr20 1307777 1307865 -65360140 + MER112 DNA MER1_type 168 252 -8 189 0 0 0 chr20 1308136 1308157 -65359848 + (CTG)n Simple_repeat Simple_repeat 1 21 0 228 272 61 35 chr20 1308887 1309001 -65359004 + L1MEc LINE L1 89 205 -6191 2636 217 43 2 chr20 1309019 1309622 -65358383 + L1MEc LINE L1 297 924 -5472 298 143 0 18 chr20 1309633 1309689 -65358316 + L1MEc LINE L1 1027 1081 -5315 * 2923 204 79 12 chr20 1309681 1310723 -65357282 + L1ME1 LINE L1 4916 6015 -151 1218 143 52 149 chr20 1312309 1312638 -65355367 + AluJo SINE Alu 1 297 -5 2153 113 3 3 chr20 1313892 1314192 -65353813 + AluSx SINE Alu 1 300 -12 938 286 134 24 chr20 1314289 1314905 -65353100 + L2 LINE L2 2611 3304 -9 214 250 0 0 chr20 1315690 1315742 -65352263 + A-rich Low_complexity Low_complexity 4 55 0 280 62 42 0 chr20 1315954 1316002 -65352003 + L1MB8 LINE L1 6124 6173 -5 519 231 127 0 chr20 1316025 1316198 -65351807 + L1MC4 LINE L1 6741 7011 -827 1624 144 41 14 chr20 1316348 1316639 -65351366 + AluJb SINE Alu 1 299 -13 471 258 65 31 chr20 1316675 1316904 -65351101 + L1MC4 LINE L1 7112 7348 -694 308 248 155 8 chr20 1317039 1317168 -65350837 + L1MC4 LINE L1 7492 7639 -403 208 293 57 57 chr20 1317264 1317370 -65350635 - MIR SINE MIR -109 153 48 206 270 32 0 chr20 1317460 1317523 -65350482 + L2 LINE L2 2630 2694 -620 662 269 110 35 chr20 1317560 1318033 -65349972 + L2 LINE L2 2737 3259 -54 211 176 0 0 chr20 1319131 1319165 -65348840 + G-rich Low_complexity Low_complexity 1 34 0 231 218 0 0 chr20 1320515 1320570 -65347435 + GA-rich Low_complexity Low_complexity 3 57 0 309 181 0 0 chr20 1321280 1321359 -65346646 + MIR SINE MIR 83 137 -71 2060 181 81 12 chr20 1322361 1322792 -65345213 + MER65C LTR ERV1 1 461 0 458 325 51 60 chr20 1322792 1323207 -65344798 - L2 LINE L2 -27 3286 2876 1923 138 37 45 chr20 1323240 1323280 -65344725 - THE1C LTR MaLR 0 375 336 2206 121 3 7 chr20 1323280 1323587 -65344418 + AluSx SINE Alu 1 306 -6 1923 138 37 45 chr20 1323587 1323924 -65344081 - THE1C LTR MaLR -39 336 1 283 181 181 43 chr20 1323929 1324023 -65343982 + MLT1G LTR MaLR 1 107 -483 1436 267 54 14 chr20 1324053 1324495 -65343510 - MLT1J LTR MaLR -30 481 22 1272 193 28 44 chr20 1325265 1325586 -65342419 - L1MDa LINE L1 -4865 1675 1360 2670 134 26 16 chr20 1325586 1326011 -65341994 + LTR3 LTR ERVK 1 429 -3 18197 87 44 16 chr20 1326020 1328608 -65339397 + HERVK3 LTR ERVK 2 2661 -4582 459 156 77 0 chr20 1328607 1328724 -65339281 + HERVK3 LTR ERVK 3536 5364 -581 * 2713 76 0 0 chr20 1328720 1329063 -65338942 + HERVK3 LTR ERVK 3965 4307 -2936 * 4678 109 9 0 chr20 1329062 1329730 -65338275 + HERVK3 LTR ERVK 4685 5358 -1885 * 7188 93 6 23 chr20 1329725 1329785 -65338220 + HERVK3 LTR ERVK 6264 6324 -919 2194 108 0 14 chr20 1329785 1330110 -65337895 - AluY SINE Alu 0 311 2 7188 93 6 23 chr20 1330110 1331044 -65336961 + HERVK3 LTR ERVK 6324 7241 -2 2696 144 7 21 chr20 1331045 1331476 -65336529 + LTR3 LTR ERVK 1 425 -7 284 211 9 37 chr20 1331489 1331598 -65336407 - L1MDa LINE L1 -5173 1367 1262 489 191 0 11 chr20 1331600 1331689 -65336316 + AluJ/FLAM SINE Alu 2 89 -223 320 253 13 0 chr20 1332138 1332217 -65335788 - L3 LINE CR1 -107 1470 1391 465 320 163 7 chr20 1332472 1332625 -65335380 + MLT1K LTR MaLR 45 221 -367 1910 176 19 48 chr20 1332625 1332858 -65335147 - MLT1A1 LTR MaLR 0 365 146 2276 83 14 0 chr20 1332858 1333148 -65334857 + AluSp SINE Alu 2 295 -18 1910 176 19 48 chr20 1333148 1333289 -65334716 - MLT1A1 LTR MaLR -219 146 2 429 178 32 189 chr20 1333333 1333519 -65334486 - MLT1A2 LTR MaLR -103 287 122 2207 110 7 0 chr20 1333519 1333820 -65334185 - AluSp SINE Alu -6 307 5 429 178 32 189 chr20 1333820 1333850 -65334155 - MLT1A2 LTR MaLR -268 122 89 2573 105 17 168 chr20 1333850 1334391 -65333614 - LTR32 LTR ERVL 0 471 13 511 189 33 0 chr20 1334389 1334479 -65333526 - MLT1A2 LTR MaLR -281 93 1 * 412 244 81 16 chr20 1334540 1334663 -65333342 + MLT1K LTR MaLR 456 586 -2 886 220 11 0 chr20 1334753 1334930 -65333075 - MER5A DNA MER1_type -4 185 7 196 254 164 0 chr20 1335159 1335226 -65332779 + L2 LINE L2 2740 2817 -497 303 311 92 0 chr20 1335727 1335846 -65332159 - MIR SINE MIR -49 213 84 1602 215 65 71 chr20 1335846 1336354 -65331651 + MLT1D LTR MaLR 1 505 0 1682 236 83 14 chr20 1336805 1337287 -65330718 - REP3 LTR ERV -47 515 1 324 0 0 0 chr20 1337366 1337402 -65330603 + (TG)n Simple_repeat Simple_repeat 2 37 0 1672 183 7 7 chr20 1337405 1337684 -65330321 - AluJb SINE Alu -33 279 1 1107 124 34 27 chr20 1337684 1337889 -65330116 - L1MB3 LINE L1 -40 6143 5935 433 255 199 39 chr20 1338333 1338652 -65329353 + MLT1J LTR MaLR 59 470 -41 191 184 26 0 chr20 1338689 1338727 -65329278 - MIR SINE MIR -142 66 28 180 380 23 8 chr20 1338848 1338977 -65329028 + L2 LINE L2 2582 2712 -602 889 112 112 6 chr20 1339136 1339297 -65328708 - L1M4 LINE L1 -554 5630 5453 289 319 11 0 chr20 1339297 1339388 -65328617 + MLT1L LTR MaLR 218 309 -306 4053 205 30 13 chr20 1339388 1339739 -65328266 + L1M4 LINE L1 3682 4026 -2120 1814 176 0 0 chr20 1339739 1340054 -65327951 + AluJb SINE Alu 1 315 0 4053 205 30 13 chr20 1340054 1340646 -65327359 + L1M4 LINE L1 4026 4642 -1504 759 315 13 4 chr20 1340646 1340884 -65327121 + MER76 LTR ERV 415 654 -34 7022 236 50 28 chr20 1340899 1342168 -65325837 + L1MD2 LINE L1 2160 3399 -2960 2249 103 14 0 chr20 1342168 1342460 -65325545 + AluSx SINE Alu 1 296 -16 7022 236 50 28 chr20 1342460 1344502 -65323503 + L1MD2 LINE L1 3399 6358 -1 246 250 26 0 chr20 1344585 1344661 -65323344 - L2 LINE L2 -741 2573 2496 296 333 130 0 chr20 1344866 1345058 -65322947 + L2 LINE L2 2853 3069 -203 678 266 88 79 chr20 1345234 1345689 -65322316 + L2 LINE L2 2812 3270 -2 463 267 62 0 chr20 1345804 1345950 -65322055 - MIR SINE MIR -70 192 38 260 295 29 9 chr20 1346128 1346233 -65321772 - MIR SINE MIR -73 135 29 273 302 38 9 chr20 1346722 1346828 -65321177 - MIR SINE MIR -84 124 16 928 216 118 146 chr20 1347039 1347600 -65320405 + MLT1K LTR MaLR 35 579 -9 224 306 194 0 chr20 1347812 1348090 -65319915 - L2 LINE L2 -129 3184 2853 3684 111 26 76 chr20 1348225 1348883 -65319122 - L1PA16 LINE L1 -4 6162 5538 2588 168 13 13 chr20 1348968 1349691 -65318314 - L1PA16 LINE L1 -634 5532 4809 876 269 112 30 chr20 1349691 1350092 -65317913 + MLT1J LTR MaLR 59 492 -19 187 222 22 0 chr20 1350095 1350140 -65317865 - L2 LINE L2 -1092 2222 2177 1851 194 58 47 chr20 1350141 1350656 -65317349 + Charlie1b DNA MER1_type 1 521 -2 585 224 33 13 chr20 1351235 1351387 -65316618 - MIR SINE MIR -57 205 51 430 196 62 0 chr20 1351475 1351572 -65316433 - L2 LINE L2 -11 3302 3200 * 777 287 111 18 chr20 1351561 1351941 -65316064 + L2 LINE L2 2899 3313 0 491 260 147 12 chr20 1351928 1352310 -65315695 - L2 LINE L2 -147 3166 2741 * 716 191 212 7 chr20 1352697 1352915 -65315090 + MER66A LTR ERV1 97 249 -229 905 152 34 22 chr20 1352932 1353110 -65314895 + L1MA9 LINE L1 6133 6312 0 2555 159 18 8 chr20 1353116 1353717 -65314288 - L1MB7 LINE L1 -35 6149 5417 1192 128 0 0 chr20 1353731 1353895 -65314110 + AluSg/x SINE Alu 132 295 -17 240 130 0 143 chr20 1353929 1354006 -65313999 - Charlie8 DNA MER1_type -2266 151 86 611 307 28 0 chr20 1354115 1354333 -65313672 + L2 LINE L2 2839 3062 -251 676 276 122 5 chr20 1354433 1354551 -65313454 + MER8 DNA MER2_type 1 104 -135 1034 173 0 12 chr20 1354551 1354719 -65313286 - FRAM SINE Alu 0 166 1 676 276 122 5 chr20 1354719 1354814 -65313191 + MER8 DNA MER2_type 104 239 0 367 295 124 0 chr20 1354814 1354943 -65313062 + L2 LINE L2 3169 3313 0 418 223 32 0 chr20 1354947 1355041 -65312964 - MIR SINE MIR -70 138 42 334 269 17 17 chr20 1355879 1355998 -65312007 + L1MC/D LINE L1 5313 5431 -2377 324 314 99 42 chr20 1356016 1356299 -65311706 + L1MDa LINE L1 27 325 -6215 914 261 18 65 chr20 1356822 1357163 -65310842 + L1MDa LINE L1 926 1250 -5293 1434 170 63 7 chr20 1357173 1357189 -65310816 - L1MB5 LINE L1 -4 6170 6156 2293 91 0 3 chr20 1357189 1357485 -65310520 + AluSg SINE Alu 1 295 -15 1434 170 63 7 chr20 1357485 1357768 -65310237 - L1MB5 LINE L1 -18 6156 5854 1180 209 129 112 chr20 1357854 1358306 -65309699 - MER77 LTR ERV1 -7 598 134 1449 157 44 27 chr20 1358450 1358659 -65309346 - L1MB5 LINE L1 -315 5859 5642 2540 219 20 34 chr20 1358659 1359221 -65308784 + MLT2B3 LTR ERVL 1 554 0 1449 157 44 27 chr20 1359221 1359305 -65308700 - L1MB5 LINE L1 -532 5642 5561 6180 194 57 44 chr20 1359970 1361881 -65306124 - L1MB5 LINE L1 -591 5583 3633 3208 219 38 60 chr20 1361936 1362017 -65305988 + L1MD2 LINE L1 5255 5336 -1023 2425 84 0 0 chr20 1362017 1362316 -65305689 - AluY SINE Alu -12 299 1 3208 219 38 60 chr20 1362316 1362659 -65305346 + L1MD2 LINE L1 5336 5685 -674 3531 124 13 19 chr20 1362659 1363189 -65304816 + MER1A DNA MER1_type 1 527 0 3208 219 38 60 chr20 1363189 1363674 -65304331 + L1MD2 LINE L1 5685 6145 -214 895 193 164 81 chr20 1363802 1364249 -65303756 + MER66A LTR ERV1 97 478 0 413 288 8 0 chr20 1364260 1364378 -65303627 - MIR SINE MIR -115 147 29 2292 122 0 3 chr20 1365342 1365653 -65302352 + AluSx SINE Alu 2 311 -1 423 262 83 18 chr20 1365686 1365854 -65302151 + MIR SINE MIR 71 249 -13 2123 124 0 0 chr20 1365864 1366188 -65301817 + AluSx SINE Alu 1 324 0 366 224 103 17 chr20 1366195 1366311 -65301694 + L1MC/D LINE L1 5415 5540 -2268 285 220 202 0 chr20 1366322 1366431 -65301574 + L1MC/D LINE L1 5622 5752 -2056 732 185 151 5 chr20 1366527 1366732 -65301273 - HsTC2 DNA Tc2 -12 1886 1652 296 213 38 25 chr20 1366739 1366819 -65301186 - MER104 DNA Tc2 -89 91 11 401 224 69 9 chr20 1368041 1368157 -65299848 + MIR SINE MIR 119 241 -21 440 252 94 8 chr20 1368202 1368329 -65299676 - MIR SINE MIR -50 212 75 225 299 63 4 chr20 1368549 1368707 -65299298 + MIR SINE MIR 2 138 -70 507 291 64 9 chr20 1369101 1369321 -65298684 - L2 LINE L2 -5 3308 3077 221 305 235 20 chr20 1372921 1373223 -65294782 + L2 LINE L2 2834 3200 -72 249 216 0 0 chr20 1373879 1373930 -65294075 + MIR SINE MIR 99 149 -59 343 289 83 0 chr20 1374192 1374313 -65293692 - MIR3 SINE MIR -52 156 26 272 280 60 10 chr20 1374691 1374792 -65293213 - L2 LINE L2 -21 3276 3147 182 308 0 0 chr20 1374858 1374910 -65293095 + MIR SINE MIR 92 143 -119 183 311 67 37 chr20 1375474 1375609 -65292396 + L2 LINE L2 1295 1433 -1881 1424 113 43 43 chr20 1376109 1376339 -65291666 - MER30 DNA MER1_type 0 230 1 344 252 110 24 chr20 1376580 1376707 -65291298 - MIR SINE MIR -11 251 114 372 259 16 0 chr20 1376866 1376955 -65291050 + MIR SINE MIR 58 148 -62 383 291 50 27 chr20 1377033 1377209 -65290796 + MIR SINE MIR 18 208 -54 746 263 65 35 chr20 1377421 1377653 -65290352 - MIR SINE MIR -13 249 11 180 287 244 43 chr20 1377909 1378024 -65289981 + MIR SINE MIR 107 244 -18 307 122 0 0 chr20 1378765 1378814 -65289191 + U5 snRNA snRNA 1 49 -67 366 277 203 16 chr20 1379430 1379746 -65288259 + L1ME4a LINE L1 5531 5905 -216 292 316 64 0 chr20 1380247 1380368 -65287637 + MIR SINE MIR 25 151 -62 654 230 163 15 chr20 1380937 1381133 -65286872 - MIR SINE MIR -17 245 21 349 322 27 4 chr20 1382108 1382221 -65285784 + MIR SINE MIR 2 109 -103 475 292 63 63 chr20 1383243 1383575 -65284430 - MER102b DNA MER1_type -9 332 1 408 336 112 8 chr20 1383973 1384241 -65283764 - L2 LINE L2 -37 3235 2940 182 250 23 0 chr20 1384242 1384286 -65283719 - L2 LINE L2 -1042 2272 2228 346 258 111 79 chr20 1384385 1384575 -65283430 + MIR3 SINE MIR 48 243 -19 581 227 45 0 chr20 1385493 1385647 -65282358 + L1ME4a LINE L1 5589 5749 -372 275 241 134 36 chr20 1385751 1385863 -65282142 + L1ME4a LINE L1 5953 6075 -46 333 313 20 10 chr20 1385990 1386089 -65281916 + L1ME4a LINE L1 5964 6063 -58 2830 176 50 29 chr20 1386092 1386746 -65281259 - L1MA7 LINE L1 -4 6287 5620 1913 148 172 8 chr20 1387935 1388301 -65279704 + MSTA LTR MaLR 1 426 -2 441 299 72 24 chr20 1388810 1389017 -65278988 + MIR SINE MIR 25 241 -21 755 261 22 0 chr20 1389027 1389211 -65278794 + MER5A DNA MER1_type 2 189 0 747 177 165 6 chr20 1389436 1389600 -65278405 + MER3 DNA MER1_type 19 208 -1 219 324 67 9 chr20 1389806 1389911 -65278094 + MIR SINE MIR 95 205 -57 578 171 85 136 chr20 1390482 1390681 -65277324 + MIR SINE MIR 74 262 0 2324 83 0 6 chr20 1391295 1391608 -65276397 - AluY SINE Alu 0 311 1 905 177 66 25 chr20 1391726 1391924 -65276081 - MIR SINE MIR -44 218 13 703 274 68 13 chr20 1393486 1393723 -65274282 - MIR SINE MIR 0 262 13 235 340 85 39 chr20 1393952 1394105 -65273900 - L2 LINE L2 -13 3259 3100 193 185 123 31 chr20 1394171 1394236 -65273769 + MIR3 SINE MIR 95 165 -43 647 244 93 6 chr20 1394377 1394549 -65273456 + MIR SINE MIR 32 218 -44 610 231 208 46 chr20 1394547 1394763 -65273242 + MIR SINE MIR 10 260 -2 * 472 216 88 0 chr20 1394809 1394911 -65273094 - L2 LINE L2 -4 3309 3199 451 258 50 0 chr20 1395968 1396088 -65271917 - L2 LINE L2 0 3313 3188 499 272 65 22 chr20 1396116 1396416 -65271589 + L2 LINE L2 2727 3039 -274 2045 237 16 19 chr20 1396459 1396945 -65271060 + LTR10B LTR ERV1 21 505 0 290 310 23 0 chr20 1396951 1397038 -65270967 + L2 LINE L2 2959 3047 -225 865 267 85 12 chr20 1397067 1397397 -65270608 - MER20B DNA MER1_type -393 390 37 478 251 75 43 chr20 1397670 1397870 -65270135 - MIR SINE MIR -6 256 1 286 303 20 13 chr20 1398077 1398229 -65269776 + C-rich Low_complexity Low_complexity 1 153 0 200 309 37 44 chr20 1398241 1398377 -65269628 + C-rich Low_complexity Low_complexity 3 137 0 256 119 0 0 chr20 1398674 1398716 -65269289 + Alu SINE Alu 259 300 -2 230 225 56 14 chr20 1398855 1398926 -65269079 + L1ME3A LINE L1 5411 5484 -2324 346 186 14 0 chr20 1398926 1398996 -65269009 + LTR60 LTR ERV1 1 71 -515 960 247 44 76 chr20 1399130 1399210 -65268795 + LTR43 LTR ERV1 131 212 -492 2119 117 0 7 chr20 1399210 1399518 -65268487 + AluSg SINE Alu 1 306 -4 960 247 44 76 chr20 1399518 1399913 -65268092 + LTR43 LTR ERV1 212 684 -20 403 292 100 26 chr20 1399926 1400318 -65267687 + L1ME3A LINE L1 5484 5909 -280 579 286 150 18 chr20 1401350 1401577 -65266428 - MIR SINE MIR 0 262 6 927 290 62 31 chr20 1401633 1402019 -65265986 + L2 LINE L2 2892 3289 -24 245 254 127 0 chr20 1402044 1402115 -65265890 - L2 LINE L2 -65 3248 3169 599 216 6 0 chr20 1402129 1402291 -65265714 + (CA)n Simple_repeat Simple_repeat 2 164 0 439 257 104 50 chr20 1402296 1402544 -65265461 - L2 LINE L2 -167 3146 2794 1478 211 109 93 chr20 1402614 1403108 -65264897 - MLT1D LTR MaLR 0 505 4 191 167 83 67 chr20 1403286 1403346 -65264659 + MIR SINE MIR 190 250 -12 2218 90 3 3 chr20 1403360 1403659 -65264346 - AluSq SINE Alu -14 299 1 533 172 60 26 chr20 1403829 1403945 -65264060 - MER20 DNA MER1_type -99 120 1 807 280 64 15 chr20 1404058 1404322 -65263683 + MLT1J LTR MaLR 1 277 -234 348 306 116 7 chr20 1405368 1405515 -65262490 - MIR SINE MIR -65 197 35 350 268 121 56 chr20 1405616 1405814 -65262191 - MIR SINE MIR -31 231 21 258 242 145 73 chr20 1405858 1405982 -65262023 - L3 LINE CR1 -130 1447 1315 346 297 55 0 chr20 1406364 1406455 -65261550 + L2 LINE L2 3169 3264 -8 1992 115 7 0 chr20 1406472 1406759 -65261246 - AluSq SINE Alu -24 289 1 532 272 54 16 chr20 1406799 1406983 -65261022 - L2 LINE L2 -182 3090 2900 208 304 0 39 chr20 1407422 1407524 -65260481 + CT-rich Low_complexity Low_complexity 3 100 0 306 226 154 81 chr20 1407536 1407757 -65260248 - L2 LINE L2 -1 3271 3035 281 372 26 19 chr20 1407827 1407983 -65260022 - MIR SINE MIR -59 203 47 503 265 126 47 chr20 1408092 1408409 -65259596 + MLT1I LTR MaLR 39 380 -29 525 308 110 22 chr20 1409052 1409207 -65258798 - MIR SINE MIR 0 262 79 2205 162 18 5 chr20 1409207 1409590 -65258415 + MLT1B LTR MaLR 3 390 0 525 308 110 22 chr20 1409590 1409661 -65258344 - MIR SINE MIR -183 79 16 224 319 0 0 chr20 1409871 1409943 -65258062 - MIR SINE MIR -59 203 132 840 133 7 7 chr20 1409958 1410101 -65257904 - FLAM_C SINE Alu 0 143 1 257 273 53 68 chr20 1410101 1410233 -65257772 - MIR SINE MIR -111 151 22 480 230 149 6 chr20 1410689 1410850 -65257155 + L1ME1 LINE L1 506 689 -5707 414 226 0 17 chr20 1410859 1410974 -65257031 + L1ME1 LINE L1 1874 1986 -4410 1641 122 86 16 chr20 1410982 1411285 -65256720 - L1MA4A LINE L1 -102 6903 6580 648 158 0 0 chr20 1411285 1411399 -65256606 + CT-rich Low_complexity Low_complexity 3 116 0 611 108 0 0 chr20 1411400 1411483 -65256522 - AluSg/x SINE Alu -59 251 169 3615 123 19 57 chr20 1411485 1411894 -65256111 - L1MA4A LINE L1 -417 6588 6165 2096 121 0 0 chr20 1411894 1412192 -65255813 - AluSx SINE Alu -14 298 1 3615 123 19 57 chr20 1412192 1412758 -65255247 - L1MA4A LINE L1 -840 6165 1728 2921 134 30 44 chr20 1412805 1413667 -65254338 + L1MA4A LINE L1 4795 5643 -660 3069 136 12 4 chr20 1413674 1414180 -65253825 + L1MA4A LINE L1 5794 6303 0 7228 224 64 35 chr20 1414180 1414417 -65253588 + L1ME1 LINE L1 2985 3214 -3021 338 0 24 0 chr20 1414417 1414459 -65253546 + (CA)n Simple_repeat Simple_repeat 2 44 0 7228 224 64 35 chr20 1414459 1414847 -65253158 + L1ME1 LINE L1 3214 3589 -2646 2123 138 0 0 chr20 1414847 1415158 -65252847 - AluSx SINE Alu -1 311 1 7228 224 64 35 chr20 1415158 1416426 -65251579 + L1ME1 LINE L1 3589 4818 -1417 678 178 99 40 chr20 1416426 1416578 -65251427 - FAM SINE Alu -10 165 5 7228 224 64 35 chr20 1416578 1417147 -65250858 + L1ME1 LINE L1 4818 5369 -866 1511 138 0 94 chr20 1417147 1417445 -65250560 + AluJb SINE Alu 25 294 -18 7228 224 64 35 chr20 1417445 1418158 -65249847 + L1ME1 LINE L1 5369 6230 -5 238 250 73 0 chr20 1418520 1418588 -65249417 + MIR SINE MIR 117 189 -73 794 190 80 0 chr20 1418612 1418775 -65249230 - MER45A DNA AcHobo -2 176 1 235 250 19 0 chr20 1418909 1418961 -65249044 + L2 LINE L2 3255 3307 -6 248 340 39 19 chr20 1418970 1419073 -65248932 - MIR SINE MIR -109 153 49 450 257 135 14 chr20 1419336 1419484 -65248521 - MIR SINE MIR 0 262 97 816 172 86 6 chr20 1419531 1419694 -65248311 + MER45A DNA AcHobo 1 176 -2 269 300 12 0 chr20 1419718 1419798 -65248207 - MIR SINE MIR -73 189 109 338 333 108 27 chr20 1420431 1420653 -65247352 + MIR SINE MIR 23 262 0 622 213 16 8 chr20 1420965 1421087 -65246918 + MIR SINE MIR 31 153 -109 1530 229 128 36 chr20 1421656 1422157 -65245848 - MLT1H LTR MaLR 0 549 3 782 175 115 65 chr20 1423741 1423958 -65244047 - L1ME2 LINE L1 -2 6162 5935 * 9012 183 33 11 chr20 1423940 1425050 -65242955 - L1 LINE L1 -1872 5693 4415 2245 94 0 0 chr20 1425050 1425348 -65242657 - AluSx SINE Alu -14 298 1 9012 183 33 11 chr20 1425348 1426149 -65241856 - L1 LINE L1 -3150 4415 3633 1290 117 0 0 chr20 1426153 1426332 -65241673 - AluSg/x SINE Alu 0 310 132 273 158 0 0 chr20 1426332 1426370 -65241635 - Alu SINE Alu -261 39 2 21280 144 27 22 chr20 1426378 1429252 -65238753 - L1 LINE L1 -3933 3632 736 3546 118 28 2 chr20 1429252 1429752 -65238253 + LTR10D LTR ERV1 1 513 0 21280 144 27 22 chr20 1429752 1430472 -65237533 - L1 LINE L1 -6829 736 21 282 206 82 123 chr20 1430470 1430713 -65237292 - L1M4c LINE L1 -3938 2446 2214 * 362 217 60 0 chr20 1430775 1430858 -65237147 - Tigger5 DNA MER2_type -2235 88 1 * 427 210 148 37 chr20 1430858 1430953 -65237052 + Tigger5 DNA MER2_type 2208 2320 -3 1528 230 70 23 chr20 1430956 1431607 -65236398 - L1M4c LINE L1 -4169 2215 1454 790 174 0 0 chr20 1431608 1431723 -65236282 - FRAM SINE Alu -20 156 42 1862 290 25 37 chr20 1431729 1432513 -65235492 - L1M2c LINE L1 -4516 1385 663 314 338 40 18 chr20 1432715 1432916 -65235089 - L1M2c LINE L1 -5189 702 237 207 0 0 0 chr20 1433563 1433586 -65234419 + (TG)n Simple_repeat Simple_repeat 1 23 0 * 303 28 0 0 chr20 1433585 1433621 -65234384 + (GA)n Simple_repeat Simple_repeat 1 36 0 198 320 16 57 chr20 1433688 1433810 -65234195 + MIR3 SINE MIR 15 131 -77 1661 248 84 50 chr20 1434838 1435716 -65232289 - L2 LINE L2 -4 3309 2118 831 273 29 12 chr20 1435662 1435904 -65232101 + MIR SINE MIR 12 257 -5 * 1999 212 111 24 chr20 1436022 1436076 -65231929 - L1MC4 LINE L1 -143 7899 7851 1825 163 18 92 chr20 1436076 1436469 -65231536 + MLT1A1 LTR MaLR 2 365 0 1999 212 111 24 chr20 1436469 1436962 -65231043 - L1MC4 LINE L1 -191 7851 7304 355 254 103 30 chr20 1437416 1437581 -65230424 + MLT1L LTR MaLR 3 179 -436 209 83 28 0 chr20 1437685 1437721 -65230284 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 251 218 0 0 chr20 1438058 1438113 -65229892 - L1MA9 LINE L1 -1 6311 6257 335 95 0 149 chr20 1439034 1439108 -65228897 + L1PA10 LINE L1 6106 6168 0 213 333 8 83 chr20 1439171 1439303 -65228702 + MIR3 SINE MIR 81 202 -6 891 294 74 98 chr20 1439785 1440895 -65227110 + L2 LINE L2 2227 3312 -1 1143 211 28 66 chr20 1441196 1441485 -65226520 - AluJb SINE Alu -25 287 10 425 271 98 0 chr20 1441658 1441689 -65226316 - MER96 DNA MER1_type? -29 146 119 2865 96 11 16 chr20 1441689 1442066 -65225939 - THE1C LTR MaLR 0 375 1 425 271 98 0 chr20 1442066 1442167 -65225838 - MER96 DNA MER1_type? -56 119 1 391 269 221 6 chr20 1442703 1442911 -65225094 + MIR SINE MIR 3 252 -10 202 292 15 15 chr20 1442923 1442988 -65225017 - MIR3 SINE MIR -5 203 139 402 147 0 0 chr20 1443136 1443204 -65224801 + (TCCA)n Simple_repeat Simple_repeat 3 70 0 1332 302 68 0 chr20 1443575 1444058 -65223947 - L1ME3A LINE L1 -295 5875 5350 345 226 69 20 chr20 1445049 1445151 -65222854 + MIR SINE MIR 86 192 -70 435 269 87 13 chr20 1445350 1445499 -65222506 - MIR SINE MIR -97 165 6 401 333 45 50 chr20 1445904 1446126 -65221879 - L2 LINE L2 -42 3230 3010 990 256 190 27 chr20 1446188 1446441 -65221564 + MLT1G1 LTR MaLR 1 212 -378 3131 198 20 0 chr20 1446441 1446987 -65221018 + MER41D LTR ERV1 1 557 0 990 256 190 27 chr20 1446987 1447195 -65220810 + MLT1G1 LTR MaLR 212 521 -69 981 244 92 7 chr20 1447485 1447788 -65220217 + Charlie2 DNA MER1_type 31 359 -2423 1480 216 98 65 chr20 1447794 1448405 -65219600 + Charlie2 DNA MER1_type 2230 2860 -2 655 255 143 50 chr20 1448419 1448803 -65219202 - L2 LINE L2 -526 2788 2369 515 158 42 11 chr20 1448958 1449053 -65218952 + MIR SINE MIR 49 146 -62 1032 315 77 12 chr20 1449647 1450126 -65217879 + L2 LINE L2 2804 3313 0 260 386 31 6 chr20 1450821 1450984 -65217021 + L2 LINE L2 2595 2761 -553 1132 242 52 67 chr20 1450999 1451446 -65216559 - HAL1 LINE L1 -25 2482 2043 1526 122 29 29 chr20 1451459 1451737 -65216268 - L1MA1 LINE L1 0 6302 6025 1669 191 22 38 chr20 1452004 1452370 -65215635 - L1MA9 LINE L1 -38 6274 5915 * 1758 183 3 30 chr20 1452369 1452707 -65215298 + L1MA9 LINE L1 5594 5922 -390 995 242 34 18 chr20 1452667 1452994 -65215011 - L1MC5 LINE L1 -178 7783 7452 * 386 241 23 0 chr20 1453031 1453118 -65214887 + LTR16C LTR ERVL 282 370 -121 23 0 0 0 chr20 1453311 1453334 -65214671 + AT_rich Low_complexity Low_complexity 1 23 0 2499 40 0 10 chr20 1453489 1453785 -65214220 + AluY SINE Alu 1 293 -18 477 0 0 0 chr20 1453785 1453838 -65214167 + (CA)n Simple_repeat Simple_repeat 2 54 0 1804 277 95 8 chr20 1453868 1454497 -65213508 - L1MC4a LINE L1 -1866 6011 5328 740 219 10 86 chr20 1454663 1454955 -65213050 - L1MC4a LINE L1 -1094 5121 4852 25 0 0 0 chr20 1454962 1454987 -65213018 + AT_rich Low_complexity Low_complexity 1 25 0 1336 27 0 0 chr20 1454987 1455135 -65212870 - L1PA4 LINE L1 -3 6152 6005 317 158 18 0 chr20 1455139 1455196 -65212809 - L1MC4a LINE L1 -1353 4862 4805 4500 233 61 45 chr20 1455198 1455939 -65212066 - L1MEc LINE L1 -2426 3789 3061 1895 154 0 3 chr20 1455939 1456224 -65211781 + AluJb SINE Alu 1 284 -28 180 97 0 0 chr20 1456224 1456255 -65211750 + (CATA)n Simple_repeat Simple_repeat 2 32 0 4500 233 61 45 chr20 1456255 1457663 -65210342 - L1MEc LINE L1 -3153 3062 1639 656 108 30 175 chr20 1457673 1457839 -65210166 - L1MB3 LINE L1 -7 6176 6035 575 202 29 0 chr20 1457842 1457946 -65210059 - U6 snRNA snRNA 0 107 1 239 176 39 0 chr20 1457949 1458000 -65210005 + Alu SINE Alu 247 299 -2 3945 251 71 56 chr20 1458003 1458104 -65209901 - L1MEc LINE L1 -1710 4505 4407 2217 123 0 0 chr20 1458104 1458405 -65209600 + AluSq SINE Alu 1 301 -12 3945 251 71 56 chr20 1458405 1458725 -65209280 - L1MEc LINE L1 -1808 4407 4093 2381 70 0 10 chr20 1458725 1459025 -65208980 - AluY SINE Alu -14 297 1 3945 251 71 56 chr20 1459025 1460509 -65207496 - L1MEc LINE L1 -2122 4093 11 283 353 8 16 chr20 1460527 1460649 -65207356 - HAL1 LINE L1 -569 1938 1818 417 287 27 27 chr20 1460758 1460946 -65207059 - HAL1 LINE L1 -900 1607 1420 687 219 7 171 chr20 1461434 1461617 -65206388 - MIR SINE MIR -26 236 111 1887 138 10 17 chr20 1461617 1461913 -65206092 + AluSx SINE Alu 1 294 -18 687 219 7 171 chr20 1461913 1462003 -65206002 - MIR SINE MIR -151 111 8 23 0 0 0 chr20 1463237 1463260 -65204745 + AT_rich Low_complexity Low_complexity 1 23 0 406 277 7 29 chr20 1463287 1463427 -65204578 + L1ME4a LINE L1 5437 5576 -545 536 256 47 33 chr20 1463676 1463891 -65204114 + L1ME4a LINE L1 5609 5826 -295 294 305 44 66 chr20 1464042 1464120 -65203885 + MIR SINE MIR 2 80 -182 2603 142 66 22 chr20 1464120 1464530 -65203475 + MSTC LTR MaLR 1 428 0 294 305 44 66 chr20 1464530 1464677 -65203328 + MIR SINE MIR 80 222 -40 740 293 4 63 chr20 1464964 1465234 -65202771 - MIR SINE MIR -2 260 7 254 28 0 28 chr20 1465457 1465493 -65202512 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 1784 243 106 43 chr20 1467215 1467770 -65200235 + MLT1G1 LTR MaLR 3 592 -3 1363 286 46 8 chr20 1467824 1468345 -65199660 - L1M4 LINE L1 -3049 3097 2557 1839 227 85 20 chr20 1468351 1468867 -65199138 + MLT1F1 LTR MaLR 1 567 0 778 250 48 20 chr20 1468897 1469145 -65198860 + MLT1D LTR MaLR 207 461 -44 947 185 20 89 chr20 1469145 1469437 -65198568 - L1MB8 LINE L1 -13 6976 6705 * 31273 101 9 10 chr20 1469431 1475126 -65192879 - L1PA7 LINE L1 -4 6465 748 5615 205 58 34 chr20 1475126 1476213 -65191792 - L1MB8 LINE L1 -276 6719 5660 891 161 0 0 chr20 1476213 1476343 -65191662 - FLAM_C SINE Alu -3 130 1 5615 205 58 34 chr20 1476343 1477643 -65190362 - L1MB8 LINE L1 -1335 5660 4055 1531 229 48 66 chr20 1477662 1478392 -65189613 - L1MB8 LINE L1 -4936 1919 1203 682 246 126 0 chr20 1478393 1478584 -65189421 - L1MB8 LINE L1 -6629 230 16 293 227 0 0 chr20 1478597 1478663 -65189342 + MLT1D LTR MaLR 440 505 0 193 208 56 69 chr20 1478911 1478983 -65189022 + MIR3 SINE MIR 87 157 -51 224 264 240 23 chr20 1479547 1479676 -65188329 + MIR SINE MIR 106 262 0 195 328 153 8 chr20 1480281 1480412 -65187593 + MIR SINE MIR 100 249 -13 26 64 0 0 chr20 1483332 1483379 -65184626 + AT_rich Low_complexity Low_complexity 1 47 0 1099 218 21 0 chr20 1483580 1483814 -65184191 + MER106B DNA MER1_type 1 239 -820 2952 116 50 84 chr20 1483819 1484414 -65183591 + L1MA7 LINE L1 5711 6285 -6 2107 215 151 15 chr20 1484520 1485042 -65182963 - MLT1E LTR MaLR 0 593 1 879 182 27 27 chr20 1485042 1485259 -65182746 + MER106B DNA MER1_type 769 985 -74 1955 201 58 14 chr20 1485260 1485692 -65182313 + MLT1C LTR MaLR 1 451 -16 2100 137 0 9 chr20 1485757 1486072 -65181933 + AluJb SINE Alu 1 312 0 191 354 0 25 chr20 1487794 1487873 -65180132 + MIR SINE MIR 20 96 -166 * 251 314 21 57 chr20 1487872 1487942 -65180063 + L2 LINE L2 2263 2334 -980 2377 99 0 0 chr20 1487942 1488236 -65179769 - AluSq SINE Alu -19 294 1 251 314 21 57 chr20 1488236 1488359 -65179646 + L2 LINE L2 2334 2449 -865 677 160 65 53 chr20 1488392 1488561 -65179444 - LTR45B LTR ERV1 0 489 319 225 282 0 14 chr20 1488631 1488702 -65179303 - MER72 LTR ERV1 -243 479 410 262 337 128 8 chr20 1488916 1489165 -65178840 + L2 LINE L2 2480 2758 -556 1414 267 31 24 chr20 1489264 1489646 -65178359 - LTR16A LTR ERVL 0 450 66 315 98 0 20 chr20 1490053 1490104 -65177901 - L1MC2 LINE L1 -12 6332 6283 4676 153 18 31 chr20 1490104 1490971 -65177034 - L1MC3 LINE L1 -99 7686 6831 262 235 73 0 chr20 1491145 1491213 -65176792 - L2 LINE L2 0 3313 3241 4714 199 47 32 chr20 1491281 1491998 -65176007 + Tigger6a DNA MER2_type 1 706 -891 2317 117 3 0 chr20 1491998 1492306 -65175699 + AluSp SINE Alu 1 309 -4 4714 199 47 32 chr20 1492306 1492330 -65175675 + Tigger6a DNA MER2_type 706 728 -869 1864 131 109 68 chr20 1492330 1492741 -65175264 - MSTA LTR MaLR 0 428 1 4714 199 47 32 chr20 1492741 1493065 -65174940 + Tigger6a DNA MER2_type 728 1083 0 376 288 24 29 chr20 1493088 1493258 -65174747 - L2 LINE L2 -177 3136 2968 256 146 83 0 chr20 1493258 1493306 -65174699 - L2 LINE L2 -580 2734 2683 312 246 14 0 chr20 1493418 1493487 -65174518 - MER63 DNA MER1_type -14 1046 977 534 191 17 26 chr20 1493488 1493603 -65174402 - MER63 DNA MER1_type -85 751 12 183 261 0 0 chr20 1494348 1494394 -65173611 - L2 LINE L2 -6 3266 3221 311 152 139 0 chr20 1495335 1495414 -65172591 - MIR SINE MIR -70 192 103 30 0 0 0 chr20 1495871 1495901 -65172104 + AT_rich Low_complexity Low_complexity 1 30 0 462 313 59 28 chr20 1495962 1496317 -65171688 + LTR16A LTR ERVL 71 436 -14 566 323 98 26 chr20 1496328 1496857 -65171148 + HERV16 LTR ERVL 11 577 -4419 477 276 86 0 chr20 1497269 1497432 -65170573 + L1MDb LINE L1 4 180 -6229 1097 262 34 44 chr20 1497497 1498061 -65169944 + L1M4 LINE L1 3027 3584 -2562 204 283 0 0 chr20 1500084 1500137 -65167868 + MIR SINE MIR 204 256 -6 337 316 59 0 chr20 1500920 1501072 -65166933 - MIR SINE MIR -74 188 28 202 133 0 0 chr20 1502629 1502659 -65165346 + L2 LINE L2 3266 3295 -18 414 249 24 71 chr20 1503211 1503380 -65164625 + MER5B DNA MER1_type 18 178 0 491 315 65 9 chr20 1503459 1503691 -65164314 - MIR SINE MIR -4 258 14 209 216 93 31 chr20 1503758 1503855 -65164150 - MIR SINE MIR -77 185 83 249 241 147 23 chr20 1504640 1504799 -65163206 + MIR3 SINE MIR 12 183 -62 545 245 172 5 chr20 1505160 1505364 -65162641 - MLT1D LTR MaLR -125 380 143 1199 110 18 0 chr20 1505411 1505575 -65162430 + AluSp SINE Alu 1 167 -146 852 244 102 11 chr20 1505593 1505867 -65162138 + L1MC4a LINE L1 5567 5865 -1943 516 242 47 0 chr20 1506093 1506242 -65161763 + MIR3 SINE MIR 45 200 -8 375 278 9 0 chr20 1506625 1506740 -65161265 + L2 LINE L2 3193 3308 -5 367 227 118 0 chr20 1507585 1507695 -65160310 - MIR SINE MIR -38 224 102 1819 176 0 13 chr20 1507732 1508038 -65159967 - AluJb SINE Alu -10 302 1 530 258 111 29 chr20 1508142 1508421 -65159584 + MLT1I LTR MaLR 53 354 -55 538 165 61 0 chr20 1508456 1508571 -65159434 - MLT1D LTR MaLR -6 499 378 745 253 49 67 chr20 1508582 1508926 -65159079 + L1MA9 LINE L1 5939 6276 -36 281 197 154 124 chr20 1508926 1509160 -65158845 - MLT1D LTR MaLR -123 382 142 2888 245 25 27 chr20 1509160 1510057 -65157948 + L1M4c LINE L1 908 1802 -4582 2017 178 93 5 chr20 1510084 1510471 -65157534 - MER88 LTR ERVL -35 429 9 822 201 23 48 chr20 1510701 1511090 -65156915 + HERVL74 LTR ERVL 1997 2450 -3235 507 184 16 48 chr20 1511094 1511219 -65156786 + HERVL74 LTR ERVL 3530 3650 -2035 367 154 26 26 chr20 1511209 1511287 -65156718 + HERVL74 LTR ERVL 3907 3984 -1701 * 990 249 21 7 chr20 1511289 1511570 -65156435 + L1 LINE L1 3724 4008 -2138 323 272 60 60 chr20 1511587 1511771 -65156234 + L2 LINE L2 3130 3313 0 345 273 157 2 chr20 1512027 1512154 -65155851 + MIR SINE MIR 12 156 -52 444 82 0 0 chr20 1512635 1512696 -65155309 + (CTA)n Simple_repeat Simple_repeat 2 62 0 7389 185 27 10 chr20 1512707 1515144 -65152861 + L1MA8 LINE L1 3790 6260 -31 2310 111 0 40 chr20 1515266 1515617 -65152388 + MER1B DNA MER1_type 1 337 0 570 312 34 13 chr20 1515826 1516060 -65151945 + MIR SINE MIR 7 245 -17 2137 158 21 10 chr20 1516360 1516746 -65151259 + MLT1B LTR MaLR 1 390 0 255 281 16 55 chr20 1518660 1518788 -65149217 + MIR SINE MIR 65 187 -75 462 305 0 28 chr20 1519208 1519385 -65148620 - MIR SINE MIR -12 250 79 1810 130 53 56 chr20 1520619 1520952 -65147053 + THE1C LTR MaLR 1 335 -40 2232 99 3 0 chr20 1520952 1521266 -65146739 - AluSx SINE Alu 0 315 1 1810 130 53 56 chr20 1521266 1521307 -65146698 + THE1C LTR MaLR 335 375 0 2206 93 7 0 chr20 1522709 1523013 -65144992 + AluSp SINE Alu 1 306 0 730 274 20 5 chr20 1523419 1523616 -65144389 + MIR SINE MIR 28 227 -35 1683 216 92 0 chr20 1524637 1525026 -65142979 + L1MCa LINE L1 73 497 -5929 1106 229 107 7 chr20 1525026 1525336 -65142669 + Tigger6 DNA MER2_type 1255 1595 -2 185 292 62 0 chr20 1525563 1525676 -65142329 - L2 LINE L2 -661 2653 2534 546 250 48 36 chr20 1525684 1525852 -65142153 - MER63A DNA MER1_type -5 205 36 1933 177 110 3 chr20 1526080 1526470 -65141535 - MSTB1 LTR MaLR 0 432 1 332 200 125 0 chr20 1527999 1528079 -65139926 - MIR SINE MIR -70 192 103 1639 215 122 54 chr20 1528230 1528802 -65139203 + LTR36 LTR ERV1 1 611 0 553 312 60 23 chr20 1529207 1529560 -65138445 + LTR16A LTR ERVL 67 432 -18 458 292 36 18 chr20 1529574 1529742 -65138263 + HERV16 LTR ERVL 11 181 -4815 554 326 52 16 chr20 1529805 1530115 -65137890 + HERV16 LTR ERVL 274 594 -4402 593 241 42 12 chr20 1530507 1530673 -65137332 + L1MDb LINE L1 2 172 -6237 1191 287 24 20 chr20 1530748 1531299 -65136706 + L1M4 LINE L1 3028 3580 -2566 26 74 0 0 chr20 1531375 1531429 -65136576 + AT_rich Low_complexity Low_complexity 1 54 0 244 276 35 0 chr20 1531802 1531860 -65136145 + MER91 DNA MER1_type 131 190 0 186 333 85 0 chr20 1533971 1534100 -65133905 - MIR SINE MIR -95 167 28 213 172 31 7 chr20 1535652 1535687 -65132318 + L2 LINE L2 3218 3295 -18 470 249 24 71 chr20 1536238 1536407 -65131598 + MER5B DNA MER1_type 18 178 0 549 315 65 9 chr20 1536486 1536718 -65131287 - MIR SINE MIR -4 258 14 234 216 93 31 chr20 1536785 1536882 -65131123 - MIR SINE MIR -77 185 83 290 255 195 20 chr20 1537667 1537816 -65130189 + MIR3 SINE MIR 12 186 -22 228 242 0 16 chr20 1538121 1538183 -65129822 + L1MA9 LINE L1 6218 6278 -34 511 241 177 5 chr20 1538187 1538390 -65129615 - MLT1D LTR MaLR -125 380 143 1091 146 18 0 chr20 1538437 1538601 -65129404 + AluSp SINE Alu 1 167 -146 734 275 99 4 chr20 1538619 1538892 -65129113 + L1MC4a LINE L1 5567 5865 -1943 619 221 47 0 chr20 1539118 1539267 -65128738 + MIR3 SINE MIR 45 200 -8 424 278 9 0 chr20 1539643 1539758 -65128247 + L2 LINE L2 3193 3308 -5 213 239 141 0 chr20 1539813 1539884 -65128121 + MIR3 SINE MIR 78 158 -50 1878 161 3 3 chr20 1540499 1540798 -65127207 - AluJb SINE Alu -13 299 1 350 278 176 6 chr20 1540832 1541008 -65126997 - L1MC4 LINE L1 -8 8034 7829 283 286 76 27 chr20 1541184 1541369 -65126636 + MER113 DNA MER1_type? 265 458 -63 1436 170 4 37 chr20 1542015 1542286 -65125719 + L1MA9 LINE L1 5661 5922 -390 995 242 34 18 chr20 1542246 1542573 -65125432 - L1MC5 LINE L1 -178 7783 7452 * 386 241 23 0 chr20 1542610 1542697 -65125308 + LTR16C LTR ERVL 282 370 -121 23 0 0 0 chr20 1542890 1542913 -65125092 + AT_rich Low_complexity Low_complexity 1 23 0 2499 40 0 10 chr20 1543068 1543364 -65124641 + AluY SINE Alu 1 293 -18 423 0 0 0 chr20 1543364 1543411 -65124594 + (CA)n Simple_repeat Simple_repeat 2 48 0 1804 277 95 8 chr20 1543441 1544070 -65123935 - L1MC4a LINE L1 -1866 6011 5328 725 223 10 86 chr20 1544236 1544528 -65123477 - L1MC4a LINE L1 -1094 5121 4852 25 0 0 0 chr20 1544535 1544560 -65123445 + AT_rich Low_complexity Low_complexity 1 25 0 1317 34 0 0 chr20 1544560 1544708 -65123297 - L1PA4 LINE L1 -3 6152 6005 317 158 18 0 chr20 1544712 1544769 -65123236 - L1MC4a LINE L1 -1353 4862 4805 4456 234 61 45 chr20 1544771 1545512 -65122493 - L1MEc LINE L1 -2426 3789 3061 1890 152 0 3 chr20 1545512 1545828 -65122177 + AluJb SINE Alu 1 315 0 4456 234 61 45 chr20 1545828 1547236 -65120769 - L1MEc LINE L1 -3154 3061 1639 656 108 30 175 chr20 1547246 1547412 -65120593 - L1MB3 LINE L1 -7 6176 6035 575 202 29 0 chr20 1547415 1547519 -65120486 - U6 snRNA snRNA 0 107 1 239 176 39 0 chr20 1547522 1547573 -65120432 + Alu SINE Alu 248 300 -2 3945 250 71 57 chr20 1547576 1547677 -65120328 - L1MEc LINE L1 -1710 4505 4407 2176 130 0 0 chr20 1547677 1547977 -65120028 + AluSq SINE Alu 1 300 -13 3945 250 71 57 chr20 1547977 1548297 -65119708 - L1MEc LINE L1 -1808 4407 4093 2405 67 0 10 chr20 1548297 1548597 -65119408 - AluY SINE Alu -14 297 1 3945 250 71 57 chr20 1548597 1550083 -65117922 - L1MEc LINE L1 -2122 4093 11 367 294 268 26 chr20 1550101 1550519 -65117486 - HAL1 LINE L1 -569 1938 1420 660 215 7 171 chr20 1551007 1551190 -65116815 - MIR SINE MIR -26 236 111 1871 138 10 20 chr20 1551190 1551486 -65116519 + AluSx SINE Alu 1 293 -19 660 215 7 171 chr20 1551486 1551576 -65116429 - MIR SINE MIR -151 111 8 23 0 0 0 chr20 1552810 1552833 -65115172 + AT_rich Low_complexity Low_complexity 1 23 0 406 277 7 29 chr20 1552860 1553000 -65115005 + L1ME4a LINE L1 5437 5576 -545 536 256 47 33 chr20 1553249 1553464 -65114541 + L1ME4a LINE L1 5609 5826 -295 294 305 44 66 chr20 1553615 1553693 -65114312 + MIR SINE MIR 2 80 -182 2603 142 66 22 chr20 1553693 1554103 -65113902 + MSTC LTR MaLR 1 428 0 294 305 44 66 chr20 1554103 1554250 -65113755 + MIR SINE MIR 80 222 -40 746 294 4 60 chr20 1554537 1554806 -65113199 - MIR SINE MIR -2 260 7 254 28 0 28 chr20 1555029 1555065 -65112940 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 1784 243 106 43 chr20 1556787 1557342 -65110663 + MLT1G1 LTR MaLR 3 592 -3 1352 288 46 8 chr20 1557396 1557917 -65110088 - L1M4 LINE L1 -3049 3097 2557 1839 227 85 20 chr20 1557923 1558439 -65109566 + MLT1F1 LTR MaLR 1 567 0 760 254 48 20 chr20 1558469 1558717 -65109288 + MLT1D LTR MaLR 207 461 -44 947 185 20 89 chr20 1558717 1559009 -65108996 - L1MB8 LINE L1 -13 6976 6705 * 31319 101 9 10 chr20 1559003 1564701 -65103304 - L1PA7 LINE L1 -4 6465 748 5644 206 58 34 chr20 1564701 1565788 -65102217 - L1MB8 LINE L1 -276 6719 5660 891 161 0 0 chr20 1565788 1565918 -65102087 - FLAM_C SINE Alu -3 130 1 5644 206 58 34 chr20 1565918 1567217 -65100788 - L1MB8 LINE L1 -1335 5660 4055 1582 229 48 66 chr20 1567236 1567966 -65100039 - L1MB8 LINE L1 -4936 1919 1203 693 246 126 0 chr20 1567967 1568158 -65099847 - L1MB8 LINE L1 -6629 230 16 300 227 0 0 chr20 1568171 1568237 -65099768 + MLT1D LTR MaLR 440 505 0 219 186 247 41 chr20 1568466 1568563 -65099442 + MIR3 SINE MIR 47 163 -45 258 264 240 23 chr20 1569121 1569250 -65098755 + MIR SINE MIR 106 262 0 229 328 153 8 chr20 1569855 1569986 -65098019 + MIR SINE MIR 100 249 -13 26 64 0 0 chr20 1572906 1572953 -65095052 + AT_rich Low_complexity Low_complexity 1 47 0 1112 218 21 0 chr20 1573154 1573388 -65094617 + MER106B DNA MER1_type 1 239 -820 2985 116 50 84 chr20 1573393 1573988 -65094017 + L1MA7 LINE L1 5711 6285 -6 2129 213 151 15 chr20 1574094 1574616 -65093389 - MLT1E LTR MaLR 0 593 1 900 182 27 27 chr20 1574616 1574833 -65093172 + MER106B DNA MER1_type 769 985 -74 1965 201 58 14 chr20 1574834 1575266 -65092739 + MLT1C LTR MaLR 1 451 -16 2119 133 0 9 chr20 1575331 1575646 -65092359 + AluJb SINE Alu 1 312 0 231 342 0 25 chr20 1577368 1577447 -65090558 + MIR SINE MIR 20 96 -166 * 271 326 80 11 chr20 1577446 1577496 -65090509 + L2 LINE L2 2263 2308 -1006 204 40 0 0 chr20 1577496 1577521 -65090484 + (TA)n Simple_repeat Simple_repeat 1 25 0 2361 96 0 0 chr20 1577521 1577814 -65090191 - AluSq SINE Alu -20 293 1 271 326 80 11 chr20 1577814 1577937 -65090068 + L2 LINE L2 2307 2449 -865 680 189 58 47 chr20 1577970 1578161 -65089844 - LTR45B LTR ERV1 0 489 297 384 336 58 11 chr20 1578494 1578743 -65089262 + L2 LINE L2 2480 2758 -556 1419 270 31 24 chr20 1578842 1579224 -65088781 - LTR16A LTR ERVL 0 450 66 309 98 0 20 chr20 1579631 1579682 -65088323 - L1MC2 LINE L1 -12 6332 6283 4361 147 51 32 chr20 1579682 1580522 -65087483 - L1MC3 LINE L1 -99 7686 6831 290 235 73 0 chr20 1580696 1580764 -65087241 - L2 LINE L2 0 3313 3241 4732 198 47 32 chr20 1580832 1581549 -65086456 + Tigger6a DNA MER2_type 1 706 -891 2188 117 3 0 chr20 1581549 1581857 -65086148 + AluSp SINE Alu 1 309 -4 4732 198 47 32 chr20 1581857 1581881 -65086124 + Tigger6a DNA MER2_type 706 728 -869 1869 131 109 68 chr20 1581881 1582292 -65085713 - MSTA LTR MaLR 0 428 1 4732 198 47 32 chr20 1582292 1582616 -65085389 + Tigger6a DNA MER2_type 728 1083 0 429 224 201 40 chr20 1582639 1582938 -65085067 - L2 LINE L2 -177 3136 2550 312 246 14 0 chr20 1582969 1583038 -65084967 - MER63 DNA MER1_type -14 1047 978 547 207 16 25 chr20 1583039 1583160 -65084845 - MER63 DNA MER1_type -311 751 6 204 244 35 58 chr20 1583899 1583985 -65084020 - L2 LINE L2 -6 3266 3183 351 152 139 0 chr20 1584886 1584965 -65083040 - MIR SINE MIR -70 192 103 193 286 44 44 chr20 1585240 1585331 -65082674 - L3 LINE CR1 -4 1573 1483 30 0 0 0 chr20 1585422 1585452 -65082553 + AT_rich Low_complexity Low_complexity 1 30 0 502 318 59 28 chr20 1585513 1585868 -65082137 + LTR16A LTR ERVL 71 436 -14 588 323 98 26 chr20 1585879 1586408 -65081597 + HERV16 LTR ERVL 11 577 -4419 487 276 86 0 chr20 1586820 1586983 -65081022 + L1MDb LINE L1 4 180 -6229 1124 261 34 44 chr20 1587048 1587612 -65080393 + L1M4 LINE L1 3027 3584 -2562 229 283 0 0 chr20 1589635 1589688 -65078317 + MIR SINE MIR 204 256 -6 191 153 0 167 chr20 1589775 1589847 -65078158 + L2 LINE L2 3212 3271 -1 421 321 115 10 chr20 1590414 1590623 -65077382 - MIR SINE MIR -4 258 28 216 172 31 7 chr20 1592175 1592210 -65075795 + L2 LINE L2 3218 3295 -18 474 249 24 71 chr20 1592762 1592931 -65075074 + MER5B DNA MER1_type 18 178 0 180 169 200 62 chr20 1592934 1592999 -65075006 - MIR3 SINE MIR -54 154 81 594 315 65 9 chr20 1593010 1593242 -65074763 - MIR SINE MIR -4 258 14 250 216 93 31 chr20 1593309 1593406 -65074599 - MIR SINE MIR -77 185 83 310 267 137 14 chr20 1594204 1594350 -65073655 + MIR SINE MIR 20 183 -79 180 210 126 76 chr20 1594428 1594547 -65073458 + MIR3 SINE MIR 6 130 -78 543 245 172 5 chr20 1594711 1594915 -65073090 - MLT1D LTR MaLR -125 380 143 1124 110 18 0 chr20 1594962 1595126 -65072879 + AluSp SINE Alu 1 167 -146 850 234 106 15 chr20 1595144 1595418 -65072587 + L1MC4a LINE L1 5567 5865 -1943 561 236 49 0 chr20 1595649 1595793 -65072212 + MIR3 SINE MIR 50 200 -8 426 278 9 0 chr20 1596176 1596291 -65071714 + L2 LINE L2 3193 3308 -5 181 250 156 0 chr20 1596353 1596417 -65071588 + MIR3 SINE MIR 85 158 -50 424 267 104 0 chr20 1597111 1597246 -65070759 - MIR SINE MIR -12 250 102 1683 180 0 13 chr20 1597283 1597589 -65070416 - AluJb SINE Alu -10 302 1 548 258 111 29 chr20 1597693 1597972 -65070033 + MLT1I LTR MaLR 53 354 -55 532 165 61 0 chr20 1598007 1598122 -65069883 - MLT1D LTR MaLR -6 499 378 750 256 49 67 chr20 1598133 1598477 -65069528 + L1MA9 LINE L1 5939 6276 -36 284 197 154 124 chr20 1598477 1598711 -65069294 - MLT1D LTR MaLR -123 382 142 3089 237 25 25 chr20 1598711 1599606 -65068399 + L1M4 LINE L1 908 1802 -4582 2124 188 70 0 chr20 1599633 1600032 -65067973 - MER88 LTR ERVL -35 429 3 876 203 13 57 chr20 1600256 1600655 -65067350 + HERVL74 LTR ERVL 1997 2452 -3233 516 226 17 17 chr20 1600653 1600768 -65067237 + HERVL74 LTR ERVL 3526 3640 -2045 * 293 188 75 25 chr20 1600769 1600849 -65067156 + HERVL74 LTR ERVL 3901 3984 -1701 903 231 43 0 chr20 1600851 1601128 -65066877 + L1M4 LINE L1 3960 4248 -2134 5376 184 30 2 chr20 1601227 1603110 -65064895 + L1MA8 LINE L1 4358 6291 0 270 303 0 0 chr20 1603181 1603247 -65064758 + (CATA)n Simple_repeat Simple_repeat 3 68 0 303 180 0 66 chr20 1603252 1603313 -65064692 - L1MC4 LINE L1 -1337 6705 6649 694 261 46 42 chr20 1603598 1603836 -65064169 + MIR SINE MIR 7 245 -17 2225 145 18 8 chr20 1604160 1604546 -65063459 + MLT1B LTR MaLR 1 390 0 221 299 77 8 chr20 1606108 1606225 -65061780 + MIR SINE MIR 91 215 -47 326 343 36 0 chr20 1606454 1606594 -65061411 + MIR SINE MIR 56 200 -62 455 297 84 21 chr20 1607019 1607219 -65060786 - MIR SINE MIR -14 248 36 335 309 44 37 chr20 1607471 1607607 -65060398 + HAL1 LINE L1 881 1017 -1490 2136 161 71 27 chr20 1607731 1608141 -65059864 - MSTA LTR MaLR 0 428 1 8311 172 51 22 chr20 1608159 1609347 -65058658 - MSTA-int LTR MaLR -18 1633 386 1860 130 0 57 chr20 1609347 1609663 -65058342 - AluSg SINE Alu -12 298 1 8311 172 51 22 chr20 1609663 1610060 -65057945 - MSTA-int LTR MaLR -1265 386 2 2379 149 67 5 chr20 1610061 1610464 -65057541 - MSTA LTR MaLR 0 428 1 578 306 78 4 chr20 1611120 1611362 -65056643 + MIR SINE MIR 3 262 0 3308 171 46 5 chr20 1612306 1612915 -65055090 + L1MCa LINE L1 73 706 -5720 3095 236 30 7 chr20 1612922 1613667 -65054338 + Tigger6a DNA MER2_type 322 1083 0 405 296 23 28 chr20 1613684 1613860 -65054145 - L2 LINE L2 -171 3142 2968 261 243 322 0 chr20 1613860 1614012 -65053993 - L2 LINE L2 -580 2734 2534 608 257 50 35 chr20 1614015 1614217 -65053788 - MER63A DNA MER1_type 0 210 6 251 265 112 10 chr20 1615872 1615970 -65052035 - MIR SINE MIR -70 192 85 229 282 39 48 chr20 1616239 1616342 -65051663 - L3 LINE CR1 -4 1573 1472 21 0 0 0 chr20 1616456 1616477 -65051528 + AT_rich Low_complexity Low_complexity 1 21 0 604 307 48 40 chr20 1616524 1616902 -65051103 + LTR16A LTR ERVL 64 444 -6 681 331 96 23 chr20 1616927 1617449 -65050556 + HERV16 LTR ERVL 37 596 -4400 362 290 19 13 chr20 1617887 1618042 -65049963 + L1MDb LINE L1 53 208 -6201 1117 275 38 22 chr20 1618078 1618627 -65049378 + L1M4 LINE L1 3027 3584 -2562 2404 41 7 3 chr20 1619497 1619792 -65048213 - AluY SINE Alu -13 298 3 2528 31 0 0 chr20 1620050 1620344 -65047661 + AluY SINE Alu 2 295 -16 218 171 0 0 chr20 1621053 1621088 -65046917 + L2 LINE L2 3255 3289 -24 197 300 0 0 chr20 1621056 1621106 -65046899 + MIR SINE MIR 213 262 0 * 192 167 0 167 chr20 1621187 1621259 -65046746 + L2 LINE L2 3253 3312 -1 389 292 115 21 chr20 1621853 1622045 -65045960 - MIR SINE MIR -32 230 21 192 281 62 31 chr20 1622268 1622332 -65045673 + MIR SINE MIR 127 192 -70 189 270 0 0 chr20 1623593 1623630 -65044375 + L2 LINE L2 3258 3294 -19 27640 134 15 12 chr20 1623890 1630289 -65037716 - L1PA8 LINE L1 0 6487 4 492 250 24 55 chr20 1630590 1630754 -65037251 + MER5B DNA MER1_type 18 176 -2 666 290 63 8 chr20 1630835 1631073 -65036932 - MIR SINE MIR -4 258 8 256 248 69 30 chr20 1631135 1631236 -65036769 - MIR SINE MIR -78 184 80 201 184 0 0 chr20 1631329 1631380 -65036625 - MIR SINE MIR -65 143 103 2308 86 3 7 chr20 1631921 1632234 -65035771 - AluSp SINE Alu 0 313 1 225 247 27 14 chr20 1632418 1632491 -65035514 + MIR SINE MIR 108 181 -81 681 287 102 4 chr20 1632773 1633038 -65034967 + L1MC4a LINE L1 5567 5857 -1951 385 276 32 73 chr20 1633258 1633422 -65034583 + MIR3 SINE MIR 41 200 -8 360 288 0 9 chr20 1633797 1633908 -65034097 + L2 LINE L2 3193 3302 -11 227 93 23 0 chr20 1633914 1633957 -65034048 + (TAAAA)n Simple_repeat Simple_repeat 1 44 0 244 210 129 0 chr20 1634023 1634085 -65033920 + MIR3 SINE MIR 91 160 -48 234 338 29 29 chr20 1634089 1634225 -65033780 + MIR SINE MIR 20 155 -107 327 205 71 18 chr20 1634802 1634914 -65033091 - MIR SINE MIR -37 225 108 1529 214 20 0 chr20 1634914 1635218 -65032787 - AluJb SINE Alu -2 310 1 312 108 14 27 chr20 1635292 1635366 -65032639 + (TA)n Simple_repeat Simple_repeat 1 73 0 409 241 151 6 chr20 1635406 1635572 -65032433 - MLT1D LTR MaLR -174 331 142 3070 233 24 31 chr20 1635584 1636473 -65031532 + L1M4 LINE L1 921 1802 -4582 1660 194 19 24 chr20 1636481 1636896 -65031109 - MER88 LTR ERVL -5 459 2 647 232 35 84 chr20 1637125 1637526 -65030479 + HERVL74 LTR ERVL 1997 2452 -3233 377 121 17 0 chr20 1637654 1637712 -65030293 + HERVL74 LTR ERVL 3922 3980 -1705 763 228 29 43 chr20 1637719 1638000 -65030005 + L1M4 LINE L1 3960 4236 -2146 342 290 18 63 chr20 1638006 1638227 -65029778 + L2 LINE L2 3103 3313 0 591 298 97 9 chr20 1638480 1638708 -65029297 + MIR SINE MIR 12 259 -3 386 259 0 0 chr20 1639130 1639215 -65028790 + L1MA8 LINE L1 3785 3869 -2277 * 5710 162 25 6 chr20 1639212 1639245 -65028760 + L1MA8 LINE L1 4680 4711 -1580 2240 119 0 3 chr20 1639245 1639548 -65028457 + AluSc SINE Alu 1 302 -7 5710 162 25 6 chr20 1639548 1641098 -65026907 + L1MA8 LINE L1 4711 6291 0 218 231 15 0 chr20 1641170 1641235 -65026770 + (TATATG)n Simple_repeat Simple_repeat 3 68 0 455 321 38 25 chr20 1641487 1641724 -65026281 + MIR SINE MIR 6 245 -17 2008 174 23 23 chr20 1642048 1642142 -65025863 + MLT1B LTR MaLR 1 94 -296 913 69 76 15 chr20 1642142 1642273 -65025732 + MER85 DNA T2_type 1 139 0 2008 174 23 23 chr20 1642273 1642568 -65025437 + MLT1B LTR MaLR 93 390 0 187 277 69 10 chr20 1643881 1643982 -65024023 + MIR SINE MIR 91 197 -65 226 346 46 0 chr20 1644231 1644361 -65023644 + MIR SINE MIR 57 192 -70 553 322 57 12 chr20 1644783 1645028 -65022977 - MIR SINE MIR -1 261 6 595 295 29 19 chr20 1646136 1646343 -65021662 + MIR SINE MIR 19 227 -35 1870 223 47 0 chr20 1647351 1647755 -65020250 + L1MCa LINE L1 75 497 -5929 1345 189 98 7 chr20 1647757 1648064 -65019941 + Tigger6 DNA MER2_type 1257 1591 -6 226 328 6 71 chr20 1648090 1648273 -65019732 - L2 LINE L2 -175 3138 2968 2494 49 0 23 chr20 1648319 1648623 -65019382 + AluY SINE Alu 1 297 -14 297 289 117 22 chr20 1648646 1648743 -65019262 - L2 LINE L2 -679 2635 2549 585 303 24 14 chr20 1648743 1648951 -65019054 - MER63A DNA MER1_type 0 210 1 297 289 117 22 chr20 1648951 1649033 -65018972 - L2 LINE L2 -765 2549 2439 2385 165 48 10 chr20 1649157 1649569 -65018436 - MSTB1 LTR MaLR 0 432 5 380 82 0 0 chr20 1650951 1651000 -65017005 + Tigger3(Golem) DNA MER2_type 2111 2159 -870 332 223 27 18 chr20 1651005 1651117 -65016888 - L1MC/D LINE L1 -2377 5431 5319 4224 130 24 110 chr20 1651199 1651648 -65016357 + Tigger3(Golem) DNA MER2_type 2147 2633 -396 1618 181 63 13 chr20 1651648 1651951 -65016054 + 7SLRNA srpRNA srpRNA 2 319 -1 4224 130 24 110 chr20 1651951 1652205 -65015800 + Tigger3(Golem) DNA MER2_type 2633 2907 -122 1536 172 60 4 chr20 1652205 1652473 -65015532 - AluJb SINE Alu -18 294 12 4224 130 24 110 chr20 1652473 1652679 -65015326 + Tigger3(Golem) DNA MER2_type 2907 2972 -57 4078 109 22 12 chr20 1652679 1653275 -65014730 - LTR43 LTR ERV1 0 602 1 4224 130 24 110 chr20 1653275 1653326 -65014679 + Tigger3(Golem) DNA MER2_type 2972 3026 -3 1005 122 6 17 chr20 1653405 1653586 -65014419 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2098 118 0 4 chr20 1653590 1653869 -65014136 - AluSg SINE Alu -32 278 1 271 279 15 0 chr20 1654407 1654475 -65013530 + MER91 DNA MER1_type 122 190 0 192 149 0 0 chr20 1655915 1655962 -65012043 + (CTAG)n Simple_repeat Simple_repeat 3 49 0 3584 112 8 4 chr20 1656806 1657315 -65010690 - MER9 LTR ERVK 0 511 1 207 0 0 0 chr20 1658029 1658052 -65009953 + (TTG)n Simple_repeat Simple_repeat 2 24 0 195 216 0 0 chr20 1658731 1658768 -65009237 + L2 LINE L2 3258 3294 -19 435 278 18 77 chr20 1659393 1659562 -65008443 + MER5B DNA MER1_type 18 176 -2 518 322 52 4 chr20 1659650 1659883 -65008122 - MIR SINE MIR -11 251 8 242 208 50 50 chr20 1659945 1660046 -65007959 - MIR SINE MIR -78 184 84 258 108 0 0 chr20 1660139 1660187 -65007818 - MIR SINE MIR -65 143 103 1826 72 0 24 chr20 1660942 1661191 -65006814 + MER75B DNA T2_type 1 243 0 686 284 108 22 chr20 1661512 1661780 -65006225 + L1MC4a LINE L1 5567 5857 -1951 339 283 55 28 chr20 1662252 1662397 -65005608 - MIR SINE MIR -12 250 102 737 306 79 6 chr20 1662548 1662865 -65005140 + MLT1I LTR MaLR 21 360 -49 481 232 16 0 chr20 1662876 1663001 -65005004 - MLT1D LTR MaLR -1 504 378 1037 267 20 26 chr20 1663002 1663347 -65004658 + L1MA9 LINE L1 5936 6278 -34 471 228 192 31 chr20 1663357 1663550 -65004455 - MLT1D LTR MaLR -139 366 143 2413 243 34 32 chr20 1663551 1664321 -65003684 + L1M4 LINE L1 908 1678 -4706 450 259 18 0 chr20 1664445 1664557 -65003448 + L1M4 LINE L1 1689 1802 -4582 2291 196 26 18 chr20 1664565 1665019 -65002986 - MER88 LTR ERVL -5 459 2 733 213 26 0 chr20 1665247 1665402 -65002603 + HERVL74 LTR ERVL 1997 2155 -3530 750 223 11 17 chr20 1665459 1665634 -65002371 + HERVL74 LTR ERVL 2279 2452 -3233 437 208 48 32 chr20 1665625 1665750 -65002255 + HERVL74 LTR ERVL 3517 3643 -2042 * 355 156 26 26 chr20 1665751 1665828 -65002177 + HERVL74 LTR ERVL 3908 3984 -1701 826 239 40 0 chr20 1665831 1666107 -65001898 + L1M4 LINE L1 3961 4247 -2135 371 285 16 59 chr20 1666147 1666333 -65001672 + L2 LINE L2 3136 3313 0 374 279 90 69 chr20 1666595 1666828 -65001177 + MIR SINE MIR 12 249 -13 1860 162 3 16 chr20 1666837 1667151 -65000854 + AluSx SINE Alu 1 310 -2 1008 229 0 8 chr20 1667601 1667837 -65000168 + L1MA8 LINE L1 3790 4023 -2123 * 1607 204 42 0 chr20 1667836 1668169 -64999836 + L1MA8 LINE L1 4824 5170 -976 5548 154 34 13 chr20 1668210 1668993 -64999012 + L1MA8 LINE L1 5167 5981 -310 2176 93 0 4 chr20 1668993 1669272 -64998733 + AluSq SINE Alu 21 298 -15 5548 154 34 13 chr20 1669272 1669590 -64998415 + L1MA8 LINE L1 5981 6291 0 207 232 0 0 chr20 1669680 1669736 -64998269 + (TA)n Simple_repeat Simple_repeat 1 56 0 553 283 33 53 chr20 1669972 1670216 -64997789 + MIR SINE MIR 7 245 -17 2125 164 19 5 chr20 1670541 1670918 -64997087 + MLT1B LTR MaLR 1 382 -8 297 262 10 10 chr20 1672917 1673013 -64994992 + MIR SINE MIR 66 160 -62 349 333 14 7 chr20 1673495 1673642 -64994363 - MIR SINE MIR -36 226 79 2499 137 62 5 chr20 1674200 1674603 -64993402 - MSTA LTR MaLR -2 426 1 556 296 54 10 chr20 1675268 1675471 -64992534 + MIR SINE MIR 8 219 -43 451 232 8 16 chr20 1675797 1675922 -64992083 + Tigger6 DNA MER2_type 1090 1213 -384 6587 114 48 0 chr20 1675922 1676871 -64991134 + L1P3 LINE L1 23 1017 -5444 7210 53 6 1 chr20 1676871 1678200 -64989805 + L1PA7 LINE L1 4820 6154 0 1799 200 63 0 chr20 1678209 1678604 -64989401 + Tigger6 DNA MER2_type 1178 1597 0 597 224 104 27 chr20 1678940 1679123 -64988882 - MER63A DNA MER1_type 0 210 14 195 197 15 61 chr20 1679159 1679225 -64988780 - L2 LINE L2 -813 2501 2439 252 253 24 24 chr20 1680805 1680888 -64987117 + MIR SINE MIR 108 190 -72 687 297 82 0 chr20 1681187 1681456 -64986549 + L1MC4a LINE L1 5567 5857 -1951 498 214 91 6 chr20 1681661 1681828 -64986177 + MIR3 SINE MIR 34 200 -8 279 342 0 33 chr20 1682216 1682336 -64985669 + L2 LINE L2 3193 3308 -5 196 368 30 54 chr20 1682440 1682606 -64985399 + MIR3 SINE MIR 2 163 -45 381 261 108 0 chr20 1683149 1683279 -64984726 - MIR SINE MIR -17 245 102 676 262 110 38 chr20 1683345 1683394 -64984611 + MLT1I LTR MaLR 21 65 -344 2500 75 3 0 chr20 1683394 1683700 -64984305 - AluSp SINE Alu -6 307 1 676 262 110 38 chr20 1683700 1683967 -64984038 + MLT1I LTR MaLR 65 360 -49 616 180 25 0 chr20 1683994 1684116 -64983889 - MLT1D LTR MaLR -4 501 377 968 271 69 10 chr20 1684126 1684331 -64983674 + L1MA9 LINE L1 5943 6173 -139 396 0 0 0 chr20 1684331 1684375 -64983630 + (CA)n Simple_repeat Simple_repeat 2 45 0 968 271 69 10 chr20 1684375 1684475 -64983530 + L1MA9 LINE L1 6173 6266 -46 2985 241 43 30 chr20 1684629 1685514 -64982491 + L1M4 LINE L1 907 1802 -4582 1787 110 0 4 chr20 1685516 1685752 -64982253 + AluSc SINE Alu 1 235 -74 766 81 0 0 chr20 1685757 1685856 -64982149 + AluSc SINE Alu 196 294 -15 2372 195 31 7 chr20 1685867 1686314 -64981691 - MER88 LTR ERVL -5 459 2 996 215 8 46 chr20 1686526 1686935 -64981070 + HERVL74 LTR ERVL 1906 2451 -3234 565 149 18 26 chr20 1686937 1687051 -64980954 + HERVL74 LTR ERVL 3529 3641 -2044 367 154 92 0 chr20 1687052 1687117 -64980888 + HERVL74 LTR ERVL 3901 3971 -1714 975 209 45 8 chr20 1687125 1687393 -64980612 + L1M4 LINE L1 3960 4237 -2145 375 280 6 57 chr20 1687409 1687584 -64980421 + L2 LINE L2 3148 3313 0 486 301 91 32 chr20 1687861 1688080 -64979925 + MIR SINE MIR 31 262 0 6852 190 42 4 chr20 1688474 1690867 -64977138 + L1MA8 LINE L1 3785 6269 -22 28 71 0 0 chr20 1690889 1690945 -64977060 + AT_rich Low_complexity Low_complexity 1 56 0 240 302 0 0 chr20 1690964 1691027 -64976978 + (CA)n Simple_repeat Simple_repeat 2 64 0 1924 143 7 30 chr20 1691089 1691390 -64976615 - AluSx SINE Alu -18 294 1 331 320 66 17 chr20 1691595 1691776 -64976229 + MIR SINE MIR 56 245 -17 1773 147 55 50 chr20 1692084 1692362 -64975643 + MLT1B LTR MaLR 1 283 -107 2186 103 7 3 chr20 1692362 1692693 -64975312 + AluSx SINE Alu 1 312 0 1773 147 55 50 chr20 1692693 1692794 -64975211 + MLT1B LTR MaLR 283 382 -8 182 218 127 0 chr20 1694371 1694426 -64973579 + MIR SINE MIR 91 152 -110 280 319 43 0 chr20 1694754 1694892 -64973113 + MIR SINE MIR 57 200 -62 23 0 0 0 chr20 1695226 1695249 -64972756 + AT_rich Low_complexity Low_complexity 1 23 0 563 315 68 5 chr20 1695313 1695535 -64972470 - MIR SINE MIR -9 253 18 2592 112 16 0 chr20 1695573 1695940 -64972065 - THE1C LTR MaLR -2 373 1 4281 256 27 20 chr20 1696574 1698784 -64969221 + L1PBa LINE L1 3 1644 -5219 14301 209 16 16 chr20 1698785 1703219 -64964786 + L1PBb LINE L1 787 5290 -913 368 289 22 15 chr20 1703228 1703363 -64964642 - MIR SINE MIR -120 142 7 237 255 69 29 chr20 1703423 1703525 -64964480 - MIR SINE MIR -77 185 80 234 330 50 0 chr20 1703579 1703679 -64964326 - MIR SINE MIR -78 184 80 229 143 0 0 chr20 1703776 1703824 -64964181 - MIR SINE MIR -66 142 103 4990 89 24 1 chr20 1704194 1704870 -64963135 - LTR8 LTR ERV1 0 691 1 204 233 51 6 chr20 1705242 1705335 -64962670 + MIR SINE MIR 97 190 -62 618 261 109 39 chr20 1705650 1705907 -64962098 + L1MC4a LINE L1 5577 5851 -1957 1975 134 0 0 chr20 1705934 1706245 -64961760 + AluSx SINE Alu 9 319 0 368 291 47 14 chr20 1706441 1706589 -64961416 + MIR3 SINE MIR 46 198 -10 336 336 0 0 chr20 1706962 1707078 -64960927 + L2 LINE L2 3193 3308 -5 202 280 133 0 chr20 1707134 1707209 -64960796 + MIR3 SINE MIR 78 162 -46 284 313 97 0 chr20 1707869 1708013 -64959992 - MIR SINE MIR -3 259 102 716 289 88 19 chr20 1708079 1708397 -64959608 + MLT1I LTR MaLR 21 360 -49 390 264 8 8 chr20 1708422 1708547 -64959458 - MLT1D LTR MaLR -3 502 378 861 270 55 21 chr20 1708555 1708885 -64959120 + L1MA9 LINE L1 5936 6276 -36 505 235 141 6 chr20 1708919 1709089 -64958916 - MLT1D LTR MaLR -171 334 142 3580 213 23 36 chr20 1709089 1709133 -64958872 + L1M4c LINE L1 908 951 -5433 2184 114 0 3 chr20 1709133 1709422 -64958583 + AluSq SINE Alu 1 288 -25 3580 213 23 36 chr20 1709422 1710283 -64957722 + L1M4c LINE L1 951 1801 -4583 2353 217 22 0 chr20 1710295 1710742 -64957263 - MER88 LTR ERVL -7 457 1 2128 157 28 0 chr20 1711244 1711600 -64956405 - MER47A DNA MER2_type 0 366 1 1187 181 0 35 chr20 1711990 1712216 -64955789 + AluJb SINE Alu 86 303 -9 255 61 0 0 chr20 1712391 1712424 -64955581 + (A)n Simple_repeat Simple_repeat 1 33 0 2157 121 114 24 chr20 1712526 1712939 -64955066 - LTR7 LTR ERV1 0 450 1 3802 100 11 16 chr20 1712939 1713499 -64954506 - HERVH LTR ERV1 0 7713 7157 1652 149 8 0 chr20 1713492 1713760 -64954245 - HERVH LTR ERV1 -1697 6016 5747 * 6314 132 6 3 chr20 1713760 1714921 -64953084 - HERVH LTR ERV1 -2287 4888 3811 2744 166 0 0 chr20 1714920 1715367 -64952638 - HERVH LTR ERV1 -4127 3586 3140 * 9676 163 19 36 chr20 1715346 1718425 -64949580 - HERVH LTR ERV1 -3622 2907 1 2379 134 53 14 chr20 1718425 1718858 -64949147 - LTR7 LTR ERV1 0 450 1 1459 217 51 58 chr20 1718974 1719408 -64948597 + LTR56 LTR ERV1 13 443 -2 267 265 12 36 chr20 1719963 1720046 -64947959 + MER4B-int LTR ERV1 614 694 -6064 586 68 0 0 chr20 1720174 1720248 -64947757 - MSTA LTR MaLR 0 428 355 2177 136 0 0 chr20 1720249 1720559 -64947446 + AluSx SINE Alu 1 310 -2 678 88 115 9 chr20 1720585 1720698 -64947307 + L1MC1 LINE L1 5994 6118 -215 543 116 23 0 chr20 1720698 1720782 -64947223 + L1MC2 LINE L1 6252 6339 -5 216 0 0 0 chr20 1720786 1720810 -64947195 + (TG)n Simple_repeat Simple_repeat 2 25 0 689 213 0 0 chr20 1720825 1720952 -64947053 + FLAM_A SINE Alu 2 128 -5 274 290 140 0 chr20 1721740 1721840 -64946165 + L2 LINE L2 3194 3307 -6 2207 102 9 22 chr20 1721943 1722258 -64945747 - AluY SINE Alu 0 311 1 1256 192 5 5 chr20 1722298 1722522 -64945483 + AluJo SINE Alu 52 275 -37 2245 106 7 0 chr20 1722883 1723167 -64944838 + AluSx SINE Alu 6 291 -21 330 286 62 36 chr20 1723326 1723518 -64944487 - L1ME LINE L1 -599 5563 5367 2102 118 41 54 chr20 1723537 1723590 -64944415 + MSTB1 LTR MaLR 1 53 -379 2492 115 25 3 chr20 1723590 1723946 -64944059 + THE1B LTR MaLR 1 364 0 2102 118 41 54 chr20 1723946 1724282 -64943723 + MSTB1 LTR MaLR 53 385 -47 282 314 39 0 chr20 1724645 1724747 -64943258 + MIR SINE MIR 91 196 -66 247 191 0 0 chr20 1725031 1725078 -64942927 - MER94 DNA DNA -11 123 77 765 183 13 12 chr20 1726803 1727042 -64940963 + CT-rich Low_complexity Low_complexity 1 239 0 17179 28 0 0 chr20 1727557 1730321 -64937684 + L1PA2 LINE L1 3387 6155 0 22 0 0 0 chr20 1730321 1730343 -64937662 + AT_rich Low_complexity Low_complexity 1 22 0 1514 231 61 20 chr20 1731071 1731512 -64936493 + L1ME2 LINE L1 5698 6156 -8 485 190 0 0 chr20 1731716 1731795 -64936210 - AluJ/FRAM SINE Alu -16 296 218 718 282 50 0 chr20 1733003 1733205 -64934800 + L2 LINE L2 2331 2542 -772 967 345 50 23 chr20 1733208 1733774 -64934231 + L1MD2 LINE L1 17 597 -5826 1029 243 82 57 chr20 1733866 1734269 -64933736 + L1MD2 LINE L1 821 1233 -5190 2478 161 13 12 chr20 1734274 1735013 -64932992 + L1P4 LINE L1 4924 5660 -505 783 204 132 14 chr20 1735009 1735409 -64932596 + L1M4 LINE L1 4735 5087 -1091 * 427 33 33 0 chr20 1735409 1735470 -64932535 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 783 204 132 14 chr20 1735470 1735781 -64932224 + L1M4 LINE L1 5087 5686 -492 231 36 0 0 chr20 1735831 1735859 -64932146 + (CA)n Simple_repeat Simple_repeat 2 29 0 550 210 25 68 chr20 1735876 1735991 -64932014 + L1MD2 LINE L1 3764 3872 -3069 2066 138 21 0 chr20 1735991 1736282 -64931723 + AluSx SINE Alu 1 297 -15 550 210 25 68 chr20 1736282 1736328 -64931677 + L1MD2 LINE L1 3872 3918 -3023 612 263 16 10 chr20 1736328 1736522 -64931483 + L1MD2 LINE L1 4612 4806 -2135 2070 221 5 0 chr20 1736543 1736936 -64931069 + L1 LINE L1 1 395 -6814 1603 176 13 3 chr20 1736938 1737437 -64930568 + L1 LINE L1 2955 3458 -3750 923 213 0 10 chr20 1737427 1737629 -64930376 + L1 LINE L1 5824 6023 -1185 * 11040 151 26 12 chr20 1737631 1738724 -64929281 + L1MA5 LINE L1 3291 4367 -1933 234 0 0 0 chr20 1738724 1738750 -64929255 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 11040 151 26 12 chr20 1738750 1740612 -64927393 + L1MA5 LINE L1 4367 6294 -6 448 184 46 55 chr20 1740623 1740732 -64927273 + L1MD2 LINE L1 4794 4901 -2040 205 237 34 17 chr20 1741256 1741315 -64926690 + MIR3 SINE MIR 130 189 -19 2445 74 0 7 chr20 1741716 1742015 -64925990 - AluY SINE Alu -14 297 1 3813 216 56 53 chr20 1744255 1744492 -64923513 + L1MD2 LINE L1 4891 5126 -1815 2090 133 0 0 chr20 1744492 1744785 -64923220 - AluSx SINE Alu -19 293 1 3813 216 56 53 chr20 1744785 1744967 -64923038 + L1MD2 LINE L1 5126 5306 -1635 3512 138 0 77 chr20 1744967 1745567 -64922438 - MLT2B3 LTR ERVL 0 554 1 3813 216 56 53 chr20 1745567 1746380 -64921625 + L1MD2 LINE L1 5306 6127 -814 3126 192 79 5 chr20 1746380 1747111 -64920894 - MER21B LTR ERV1 0 863 1 3474 194 45 30 chr20 1747111 1747888 -64920117 + L1MD2 LINE L1 6117 6905 -249 2287 118 0 0 chr20 1747949 1748254 -64919751 + AluSx SINE Alu 1 305 -7 781 261 65 50 chr20 1748256 1748639 -64919366 + HAL1 LINE L1 2118 2506 -1 1987 121 80 0 chr20 1748685 1748974 -64919031 + AluSx SINE Alu 1 312 0 613 269 114 35 chr20 1748979 1749469 -64918536 + L1M4 LINE L1 4225 4753 -1393 4142 139 38 17 chr20 1749506 1750198 -64917807 - Tigger1 DNA MER2_type -1695 723 18 1049 142 0 7 chr20 1750431 1750586 -64917419 + AluSg/x SINE Alu 129 282 -30 302 149 95 25 chr20 1750586 1750665 -64917340 - L1M4 LINE L1 -1063 5083 5000 861 256 60 34 chr20 1750788 1751139 -64916866 - L1MEc LINE L1 -4387 2009 1650 311 169 46 0 chr20 1751246 1751311 -64916694 + L1MC4 LINE L1 1996 2063 -4363 * 349 231 0 22 chr20 1751293 1751399 -64916606 + L1MC4 LINE L1 1996 6983 -1339 1038 148 0 0 chr20 1751399 1751575 -64916430 + (TA)n Simple_repeat Simple_repeat 1 176 0 327 301 60 23 chr20 1751725 1751991 -64916014 + L1ME3A LINE L1 5681 5956 -214 329 303 40 0 chr20 1752662 1752761 -64915244 - L2 LINE L2 0 3313 3211 261 262 33 66 chr20 1753661 1753783 -64914222 - MIR SINE MIR -71 191 74 416 246 26 0 chr20 1753871 1753985 -64914020 - MIR SINE MIR -56 206 90 1038 88 0 0 chr20 1754929 1755076 -64912929 + (TGGA)n Simple_repeat Simple_repeat 1 147 0 258 278 100 0 chr20 1755251 1755341 -64912664 - MIR SINE MIR -121 141 43 306 286 11 33 chr20 1755568 1755659 -64912346 + MIR SINE MIR 25 113 -95 201 314 14 0 chr20 1756235 1756305 -64911700 - MIR SINE MIR -38 224 154 30 69 0 0 chr20 1756422 1756480 -64911525 + AT_rich Low_complexity Low_complexity 1 58 0 399 294 55 31 chr20 1757111 1757366 -64910639 + LTR16C LTR ERVL 231 491 0 340 301 9 26 chr20 1757571 1757684 -64910321 - MIR SINE MIR -106 156 46 319 270 144 0 chr20 1757646 1757757 -64910248 + MIR3 SINE MIR 13 139 -69 * 448 258 12 78 chr20 1758304 1758471 -64909534 - MIR SINE MIR 0 262 107 807 208 35 0 chr20 1759101 1759274 -64908731 - MIR SINE MIR -67 195 17 383 244 148 17 chr20 1759369 1759484 -64908521 + MIR SINE MIR 16 145 -117 5692 90 5 31 chr20 1759627 1760402 -64907603 - L1PA10 LINE L1 -1 6167 5413 359 251 95 56 chr20 1760491 1760657 -64907348 - MIR SINE MIR -68 140 16 2191 113 7 0 chr20 1760912 1761204 -64906801 + AluSq SINE Alu 1 294 -19 195 295 13 51 chr20 1761547 1761625 -64906380 + MIR SINE MIR 20 94 -168 1548 144 22 0 chr20 1762777 1763100 -64904905 + L1P4 LINE L1 5173 5501 -664 369 96 72 36 chr20 1763100 1763180 -64904825 + L1PA13 LINE L1 6074 6159 -4 259 167 14 28 chr20 1763227 1763299 -64904706 + GA-rich Low_complexity Low_complexity 6 76 0 460 270 81 0 chr20 1764391 1764502 -64903503 + L2 LINE L2 3192 3311 -2 702 244 60 44 chr20 1764578 1764828 -64903177 - MIR SINE MIR 0 262 9 1077 280 105 37 chr20 1765484 1766199 -64901806 - L2 LINE L2 -219 3094 2334 229 288 140 59 chr20 1766296 1766532 -64901473 - L3 LINE CR1 -113 1464 1210 189 393 33 8 chr20 1766527 1766649 -64901356 - L2 LINE L2 -25 3288 3164 * 430 267 30 30 chr20 1766841 1766976 -64901029 - MIR SINE MIR -108 154 20 257 135 19 0 chr20 1767016 1767068 -64900937 + CT-rich Low_complexity Low_complexity 2 54 0 194 259 24 59 chr20 1767300 1767385 -64900620 + MIR3 SINE MIR 106 187 -21 234 282 150 32 chr20 1768153 1768373 -64899632 + L2 LINE L2 3047 3292 -21 230 254 0 18 chr20 1768980 1769035 -64898970 + (CA)n Simple_repeat Simple_repeat 1 54 0 478 191 9 57 chr20 1769406 1769511 -64898494 - MER3 DNA MER1_type -81 128 29 286 238 63 0 chr20 1769620 1769683 -64898322 + L2 LINE L2 3138 3204 -68 399 98 0 0 chr20 1769707 1769768 -64898237 + (TGGA)n Simple_repeat Simple_repeat 1 61 0 2303 97 3 0 chr20 1770309 1770607 -64897398 + AluSg SINE Alu 1 299 -11 259 314 7 51 chr20 1770739 1770876 -64897129 + L2 LINE L2 3180 3310 -3 543 291 214 8 chr20 1770889 1771281 -64896724 - L2 LINE L2 0 3313 2841 404 291 80 11 chr20 1771637 1771812 -64896193 + MIR3 SINE MIR 6 192 -16 433 237 21 0 chr20 1771898 1771995 -64896010 + MER45 DNA AcHobo 24 122 -56 792 248 53 46 chr20 1772563 1772845 -64895160 + L2 LINE L2 2989 3272 0 463 268 101 22 chr20 1773473 1773652 -64894353 + L3 LINE CR1 1308 1500 -77 340 272 26 26 chr20 1773664 1773778 -64894227 - MER112 DNA MER1_type 0 260 147 247 282 13 13 chr20 1773778 1773856 -64894149 + GA-rich Low_complexity Low_complexity 3 80 0 245 241 0 76 chr20 1773942 1774021 -64893984 - MER112 DNA MER1_type -175 85 13 267 365 149 14 chr20 1774141 1774289 -64893716 - L2 LINE L2 -1 3271 3104 247 308 105 49 chr20 1774355 1774498 -64893507 - MIR SINE MIR -110 152 2 184 250 37 128 chr20 1774504 1774668 -64893337 - L2 LINE L2 -161 3111 2963 359 342 0 0 chr20 1774728 1774842 -64893163 + MIR SINE MIR 40 153 -109 731 270 42 0 chr20 1774936 1775125 -64892880 + MIR SINE MIR 66 262 0 236 213 37 111 chr20 1775170 1775278 -64892727 - L2 LINE L2 0 3272 3173 2130 242 89 78 chr20 1775624 1776578 -64891427 + L1MC3 LINE L1 1 965 -5080 1201 135 6 0 chr20 1776581 1776759 -64891246 + MER46B DNA MER2_type 2 55 -181 740 182 0 0 chr20 1776766 1776876 -64891129 + FLAM_A SINE Alu 8 117 -25 315 0 0 0 chr20 1776886 1776921 -64891084 + (CA)n Simple_repeat Simple_repeat 2 36 0 2412 106 48 34 chr20 1776990 1777348 -64890657 - THE1B LTR MaLR -1 363 1 1170 155 11 0 chr20 1777349 1777536 -64890469 + MER46B DNA MER2_type 48 236 0 1146 184 108 54 chr20 1777534 1777850 -64890155 - MLT1D LTR MaLR 0 505 173 * 2981 184 50 35 chr20 1777857 1779071 -64888934 + L1MB4 LINE L1 4693 5930 -250 1508 170 10 35 chr20 1779078 1779367 -64888638 + L1MB7 LINE L1 5557 5838 -346 357 191 0 0 chr20 1779367 1779430 -64888575 + FLAM_A SINE Alu 4 66 -67 1642 163 15 45 chr20 1779434 1779674 -64888331 + L1MB7 LINE L1 5844 6073 -111 1973 113 63 14 chr20 1779674 1779958 -64888047 - AluSx SINE Alu -13 299 2 1642 163 15 45 chr20 1779958 1780049 -64887956 + L1MB7 LINE L1 6073 6165 -19 8512 242 62 25 chr20 1780064 1782360 -64885645 + L1MC3 LINE L1 2713 4922 -1642 1492 138 0 9 chr20 1782360 1782585 -64885420 + AluSg/x SINE Alu 87 309 -3 8512 242 62 25 chr20 1782585 1783068 -64884937 + L1MC3 LINE L1 4922 5386 -1178 1734 136 0 19 chr20 1783068 1783326 -64884679 + AluSx SINE Alu 1 253 -59 1532 185 35 0 chr20 1783328 1783588 -64884417 + AluJo SINE Alu 42 310 -2 8512 242 62 25 chr20 1783588 1783647 -64884358 + L1MC3 LINE L1 5386 5678 -886 1737 172 42 20 chr20 1783678 1784032 -64883973 - MLT2B1 LTR ERVL -158 362 1 7979 166 51 73 chr20 1784039 1785014 -64882991 + L1MC3 LINE L1 5676 6588 -1615 2297 83 20 0 chr20 1785014 1785315 -64882690 + AluSp SINE Alu 1 307 -6 7979 166 51 73 chr20 1785315 1786290 -64881715 + L1MC3 LINE L1 6588 7583 -620 587 205 41 53 chr20 1786296 1786467 -64881538 - L1MC3 LINE L1 -396 7389 7221 616 249 74 21 chr20 1786640 1786829 -64881176 + MLT1H LTR MaLR 20 218 -331 353 229 132 79 chr20 1786870 1787097 -64880908 + MLT1H LTR MaLR 348 586 -9 296 293 30 28 chr20 1787119 1787559 -64880446 + L1MC4a LINE L1 5676 6023 -141 505 299 14 14 chr20 1788251 1788395 -64879610 - MIR3 SINE MIR -62 146 3 187 54 54 0 chr20 1788647 1788684 -64879321 + (CTCCG)n Simple_repeat Simple_repeat 5 43 0 23 54 0 0 chr20 1788689 1788726 -64879279 + GC_rich Low_complexity Low_complexity 1 37 0 240 269 90 0 chr20 1789452 1789530 -64878475 - MIR SINE MIR -1 261 177 371 252 167 15 chr20 1789863 1790132 -64877873 - L2 LINE L2 -252 3061 2751 202 318 0 30 chr20 1790414 1790480 -64877525 + L2 LINE L2 3172 3235 -37 1424 247 116 54 chr20 1790499 1791050 -64876955 + MER115 DNA AcHobo 59 643 -50 356 280 48 71 chr20 1791138 1791306 -64876699 - MIR SINE MIR -73 189 26 941 241 55 56 chr20 1791550 1791672 -64876333 - MLT1J LTR MaLR -55 456 335 1699 244 86 30 chr20 1791672 1792196 -64875809 - MLT1H1 LTR MaLR -2 553 1 941 241 55 56 chr20 1792196 1792484 -64875521 - MLT1J LTR MaLR -176 335 3 183 42 0 0 chr20 1792496 1792520 -64875485 + (TTG)n Simple_repeat Simple_repeat 1 24 0 566 274 109 10 chr20 1792719 1792920 -64875085 - MIR SINE MIR -24 238 18 190 246 35 35 chr20 1793401 1793458 -64874547 + MIR SINE MIR 108 164 -98 495 276 78 43 chr20 1793736 1793968 -64874037 + MIR SINE MIR 10 249 -13 499 278 101 44 chr20 1793977 1794225 -64873780 - MIR SINE MIR 0 262 1 1589 291 92 15 chr20 1794992 1795979 -64872026 + L2 LINE L2 2246 3312 -1 262 288 8 72 chr20 1796693 1796818 -64871187 - MER5B DNA MER1_type -33 145 29 576 189 101 63 chr20 1797542 1797701 -64870304 + MIR SINE MIR 28 192 -70 767 180 19 66 chr20 1797822 1797991 -64870014 - L2 LINE L2 -1 3312 3153 2144 89 30 43 chr20 1797991 1798294 -64869711 + AluSx SINE Alu 1 299 -13 767 180 19 66 chr20 1798294 1798335 -64869670 - L2 LINE L2 -160 3153 3112 281 305 21 21 chr20 1798346 1798441 -64869564 + MIR SINE MIR 20 114 -148 1202 235 94 27 chr20 1798487 1798518 -64869487 - L2 LINE L2 -3 3310 3283 1940 137 3 51 chr20 1798518 1798831 -64869174 + AluSx SINE Alu 1 298 -14 1202 235 94 27 chr20 1798831 1799203 -64868802 - L2 LINE L2 -30 3283 2880 369 281 89 98 chr20 1799764 1800201 -64867804 + L2 LINE L2 2837 3269 -3 1143 123 0 0 chr20 1800211 1800431 -64867574 + (TGGA)n Simple_repeat Simple_repeat 1 220 0 726 281 142 8 chr20 1800472 1800924 -64867081 + L2 LINE L2 2566 3078 -235 527 270 40 72 chr20 1801508 1801786 -64866219 + L2 LINE L2 3025 3293 -20 401 310 64 18 chr20 1801861 1802032 -64865973 + MER117 DNA MER1_type 4 182 -15 408 349 32 32 chr20 1803052 1803270 -64864735 - MIR SINE MIR -37 225 8 217 252 32 58 chr20 1803500 1803655 -64864350 + (TCTCTG)n Simple_repeat Simple_repeat 6 156 0 * 224 325 8 8 chr20 1803555 1803672 -64864333 + CT-rich Low_complexity Low_complexity 1 117 0 381 86 0 0 chr20 1803686 1803744 -64864261 + (TC)n Simple_repeat Simple_repeat 1 58 0 294 231 19 28 chr20 1803830 1803938 -64864067 + CT-rich Low_complexity Low_complexity 2 108 0 642 264 3 6 chr20 1803966 1804290 -64863715 + CT-rich Low_complexity Low_complexity 1 322 0 643 319 31 4 chr20 1805890 1806119 -64861886 - MIR SINE MIR -12 250 16 221 319 228 12 chr20 1806569 1806932 -64861073 + L2 LINE L2 2596 3056 -257 370 288 59 31 chr20 1807057 1807279 -64860726 + L1M4 LINE L1 14 241 -6301 1285 223 204 29 chr20 1807539 1807730 -64860275 + L1M4 LINE L1 800 956 -5690 188 35 35 0 chr20 1807730 1807759 -64860246 + (CAA)n Simple_repeat Simple_repeat 1 30 0 1285 223 204 29 chr20 1807759 1808088 -64859917 + L1M4 LINE L1 956 1411 -5235 940 231 89 28 chr20 1808098 1808423 -64859582 + L1M4 LINE L1 2630 2974 -3670 216 333 48 12 chr20 1808454 1808538 -64859467 + L2 LINE L2 3204 3290 -23 323 311 9 0 chr20 1808813 1808919 -64859086 - MIR3 SINE MIR -39 169 63 259 305 12 0 chr20 1809121 1809203 -64858802 - MIR SINE MIR -70 192 110 185 227 45 45 chr20 1809635 1809701 -64858304 - MIR SINE MIR -57 151 86 274 270 101 20 chr20 1810421 1810569 -64857436 - MIR3 SINE MIR -3 205 46 408 300 64 53 chr20 1811456 1811813 -64856192 + L2 LINE L2 2826 3186 -127 181 311 16 0 chr20 1811820 1811881 -64856124 + MER5B DNA MER1_type 4 65 -113 2032 138 0 25 chr20 1811889 1812254 -64855751 + AluJb SINE Alu 1 357 0 486 231 29 0 chr20 1812257 1812361 -64855644 + MER5B DNA MER1_type 68 174 -4 335 283 100 33 chr20 1812359 1812479 -64855526 + L2 LINE L2 3144 3271 -1 * 203 333 0 0 chr20 1812629 1812692 -64855313 - L2 LINE L2 -338 2976 2914 424 320 56 0 chr20 1812973 1813151 -64854854 - MIR SINE MIR -18 244 57 730 167 0 38 chr20 1814131 1814317 -64853688 + CT-rich Low_complexity Low_complexity 2 180 0 1789 152 0 31 chr20 1814349 1814638 -64853367 + AluJo SINE Alu 1 280 -32 180 0 0 0 chr20 1814638 1814658 -64853347 + (TAAAA)n Simple_repeat Simple_repeat 1 20 0 667 318 121 27 chr20 1814752 1815457 -64852548 - L2 LINE L2 -16 3297 2507 234 0 0 0 chr20 1815457 1815483 -64852522 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 667 318 121 27 chr20 1815483 1815506 -64852499 - L2 LINE L2 -806 2507 2488 475 243 7 49 chr20 1815497 1815641 -64852364 + MIR3 SINE MIR 45 182 -26 * 244 241 52 0 chr20 1816058 1816116 -64851889 - MIR SINE MIR -90 172 112 230 343 6 90 chr20 1816376 1816542 -64851463 - L2 LINE L2 0 3272 3121 399 255 179 0 chr20 1816573 1816718 -64851287 + MIR SINE MIR 89 259 -3 1433 268 123 2 chr20 1816772 1817186 -64850819 - LTR16B LTR ERVL 0 464 1 358 316 21 21 chr20 1817627 1817814 -64850191 - MIR3 SINE MIR -21 187 1 205 360 18 45 chr20 1818570 1818681 -64849324 - MIR3 SINE MIR -25 183 76 425 191 198 0 chr20 1818729 1818855 -64849150 + MIR SINE MIR 38 188 -74 342 333 135 0 chr20 1818993 1819134 -64848871 - MIR SINE MIR -59 203 44 343 320 40 0 chr20 1819179 1819279 -64848726 - L2 LINE L2 0 3313 3210 387 204 150 0 chr20 1819296 1819409 -64848596 - MIR SINE MIR -96 166 37 1011 297 80 23 chr20 1819817 1820302 -64847703 - LTR33 LTR ERVL -5 516 4 285 151 19 0 chr20 1820409 1820462 -64847543 - MLT1I LTR MaLR -16 393 340 749 213 202 0 chr20 1820462 1820645 -64847360 + MER58A DNA MER1_type 5 224 0 * 925 289 29 26 chr20 1820645 1820989 -64847016 - MLT1I LTR MaLR -60 349 5 757 209 12 6 chr20 1821393 1821556 -64846449 + MER5A DNA MER1_type 3 166 -23 1424 240 113 15 chr20 1821608 1822442 -64845563 + L2 LINE L2 2380 3308 -5 407 245 106 49 chr20 1822596 1822807 -64845198 + MIR SINE MIR 33 246 -16 408 277 22 36 chr20 1822917 1823054 -64844951 + MIR3 SINE MIR 42 176 -32 538 229 118 17 chr20 1823266 1823446 -64844559 + MIR SINE MIR 64 262 0 460 251 143 30 chr20 1823465 1823668 -64844337 - MIR SINE MIR -29 233 8 270 318 0 13 chr20 1824473 1824627 -64843378 + (CA)n Simple_repeat Simple_repeat 1 152 0 225 340 52 0 chr20 1824627 1824724 -64843281 + MIR SINE MIR 70 171 -91 342 290 75 32 chr20 1824769 1824955 -64843050 - L2 LINE L2 -1 3312 3119 893 294 89 12 chr20 1825291 1825873 -64842132 - L2 LINE L2 -127 3186 2566 1068 287 80 22 chr20 1825897 1826360 -64841645 - L2 LINE L2 -7 3306 2817 3031 161 38 7 chr20 1827359 1827919 -64840086 + L1MB3 LINE L1 5607 6183 0 960 276 93 30 chr20 1828023 1828501 -64839504 + L2 LINE L2 2803 3312 -1 748 288 151 24 chr20 1828853 1829158 -64838847 - L2 LINE L2 0 3313 2940 1827 174 7 64 chr20 1829158 1829329 -64838676 + MSTD LTR MaLR 1 180 -216 2064 142 30 3 chr20 1829329 1829631 -64838374 + AluSx SINE Alu 1 310 -2 1827 174 7 64 chr20 1829631 1829879 -64838126 + MSTD LTR MaLR 180 396 0 748 288 151 24 chr20 1829879 1829990 -64838015 - L2 LINE L2 -373 2940 2844 1080 217 13 4 chr20 1830677 1830907 -64837098 + MIR SINE MIR 9 240 -22 566 319 19 28 chr20 1831417 1831630 -64836375 - MIR SINE MIR 0 262 52 479 284 21 66 chr20 1832156 1832445 -64835560 + L1MCa LINE L1 914 1189 -5237 1325 277 40 45 chr20 1832521 1832695 -64835310 - L2 LINE L2 -1 3312 3139 2655 88 6 0 chr20 1832695 1833057 -64834948 - THE1B LTR MaLR 0 364 1 1325 277 40 45 chr20 1833057 1833677 -64834328 - L2 LINE L2 -174 3139 2525 365 340 47 34 chr20 1834170 1834405 -64833600 + L2 LINE L2 2615 2852 -462 384 289 79 9 chr20 1834666 1834780 -64833225 - MER117 DNA MER1_type -16 181 60 1927 111 7 28 chr20 1834801 1835139 -64832866 + AluSx SINE Alu 1 332 0 800 107 0 50 chr20 1835145 1835266 -64832739 - AluSq SINE Alu -130 183 69 218 248 9 53 chr20 1835274 1835387 -64832618 + G-rich Low_complexity Low_complexity 4 111 0 320 300 31 31 chr20 1835393 1835523 -64832482 + MIR3 SINE MIR 52 181 -27 241 321 57 0 chr20 1835547 1835653 -64832352 - L2 LINE L2 -19 3253 3142 470 17 17 0 chr20 1835656 1835715 -64832290 + (TG)n Simple_repeat Simple_repeat 2 61 0 413 300 20 0 chr20 1836061 1836211 -64831794 - MER103 DNA DNA -13 153 1 347 332 118 37 chr20 1836267 1836616 -64831389 - MLT1K LTR MaLR -33 555 179 953 328 48 32 chr20 1836718 1837215 -64830790 + MLT1L LTR MaLR 32 536 -79 257 252 71 31 chr20 1837777 1837904 -64830101 + L1ME4a LINE L1 5724 5855 -266 387 284 57 57 chr20 1837917 1838111 -64829894 + L1ME4a LINE L1 5926 6119 -2 353 330 35 25 chr20 1838524 1838724 -64829281 - MIR SINE MIR 0 262 61 776 307 106 40 chr20 1838908 1839286 -64828719 + L2 LINE L2 2911 3313 0 1595 154 11 28 chr20 1839410 1839695 -64828310 - AluJo SINE Alu -20 292 13 500 347 31 5 chr20 1839721 1839917 -64828088 - MIR SINE MIR -58 204 4 264 259 0 0 chr20 1839939 1839993 -64828012 + L2 LINE L2 3168 3221 -51 612 169 0 4 chr20 1840028 1840163 -64827842 + MER5A DNA MER1_type 1 189 0 294 259 241 44 chr20 1840923 1841081 -64826924 - MIR3 SINE MIR -56 152 2 302 315 63 24 chr20 1841412 1841539 -64826466 + MIR3 SINE MIR 67 198 -10 418 252 99 13 chr20 1841629 1841780 -64826225 - MIR SINE MIR -1 261 98 409 308 83 6 chr20 1841969 1842125 -64825880 + L3 LINE CR1 1354 1521 -56 908 209 60 5 chr20 1842184 1842399 -64825606 + MIR SINE MIR 36 262 0 293 206 137 0 chr20 1842673 1842746 -64825259 - MIR SINE MIR -62 146 64 258 259 123 0 chr20 1843325 1843406 -64824599 - MIR SINE MIR -61 147 57 2710 124 12 19 chr20 1843558 1843984 -64824021 - L1PA13 LINE L1 -4 6159 5737 787 298 34 8 chr20 1843998 1844233 -64823772 - MIR SINE MIR -14 248 8 593 273 92 83 chr20 1844396 1844807 -64823198 + MLT1J LTR MaLR 91 505 -6 324 248 174 16 chr20 1845177 1845298 -64822707 - L2 LINE L2 -6 3307 3168 261 271 65 37 chr20 1845383 1845490 -64822515 - MLT1L LTR MaLR -202 391 200 429 219 79 9 chr20 1846253 1846367 -64821638 + MIR SINE MIR 26 147 -115 410 186 144 0 chr20 1846365 1846462 -64821543 - L2 LINE L2 0 3313 3203 * 748 307 35 58 chr20 1846854 1847281 -64820724 - L2 LINE L2 0 3313 2897 365 303 25 0 chr20 1847442 1847564 -64820441 - MIR3 SINE MIR -75 133 9 619 304 91 29 chr20 1848446 1848788 -64819217 - L2 LINE L2 -18 3295 2933 1184 242 48 22 chr20 1849068 1849382 -64818623 - LTR16C LTR ERVL -1 490 169 822 150 0 0 chr20 1849711 1849844 -64818161 + FRAM SINE Alu 41 173 -3 333 320 39 8 chr20 1850053 1850181 -64817824 + MIR SINE MIR 85 216 -46 224 265 15 0 chr20 1850253 1850321 -64817684 - L2 LINE L2 -56 3257 3189 337 293 130 40 chr20 1850321 1850574 -64817431 + L1ME4a LINE L1 5844 6119 -2 204 168 12 62 chr20 1851453 1851614 -64816391 + (TA)n Simple_repeat Simple_repeat 2 154 0 598 231 64 25 chr20 1851681 1851930 -64816075 + MLT1K LTR MaLR 295 588 0 831 206 183 4 chr20 1852134 1852386 -64815619 + MLT1J2 LTR MaLR 154 450 0 336 313 30 30 chr20 1852541 1852672 -64815333 + L2 LINE L2 3138 3268 -4 734 242 34 6 chr20 1853253 1853431 -64814574 + MIR SINE MIR 2 184 -78 717 89 32 8 chr20 1853458 1853581 -64814424 + CT-rich Low_complexity Low_complexity 2 127 0 1950 139 19 10 chr20 1853585 1853894 -64814111 - AluSx SINE Alu 0 312 1 612 133 17 25 chr20 1853901 1854021 -64813984 + Charlie1 DNA MER1_type 2631 2749 -12 400 282 43 0 chr20 1854468 1854585 -64813420 + MIR SINE MIR 79 200 -62 261 128 0 0 chr20 1854586 1854625 -64813380 - MLT1B LTR MaLR 0 390 352 2108 131 0 0 chr20 1854628 1854940 -64813065 + AluSx SINE Alu 1 312 0 578 126 0 0 chr20 1854972 1855062 -64812943 + MLT1C LTR MaLR 333 459 -46 416 313 23 8 chr20 1855128 1855256 -64812749 - L2 LINE L2 -4 3309 3180 307 284 0 0 chr20 1855243 1855324 -64812681 - L2 LINE L2 -491 2823 2743 * 2106 102 8 72 chr20 1855333 1855695 -64812310 - MLT1B LTR MaLR -48 342 4 492 249 158 11 chr20 1855791 1855968 -64812037 - LTR16A LTR ERVL -232 218 16 285 286 109 8 chr20 1855968 1856087 -64811918 + MIR SINE MIR 67 197 -65 1078 245 106 48 chr20 1856097 1856676 -64811329 - L2 LINE L2 -1 3312 2701 184 260 52 39 chr20 1856811 1856888 -64811117 + L2 LINE L2 2976 3053 -219 292 155 0 17 chr20 1856981 1857039 -64810966 + MIR SINE MIR 101 157 -105 218 245 0 20 chr20 1857510 1857559 -64810446 + L2 LINE L2 3216 3263 -9 347 266 9 18 chr20 1857573 1857682 -64810323 + MIR SINE MIR 37 144 -118 1781 185 95 19 chr20 1858055 1858423 -64809582 + MSTD LTR MaLR 1 396 0 510 291 158 2 chr20 1858517 1858736 -64809269 - MIR SINE MIR -2 260 13 462 225 219 25 chr20 1858740 1858900 -64809105 + MIR SINE MIR 2 192 -70 354 222 69 106 chr20 1859179 1859368 -64808637 - MER5A DNA MER1_type -7 182 1 292 213 67 0 chr20 1859375 1859450 -64808555 + MIR SINE MIR 118 197 -65 234 243 14 14 chr20 1859901 1859971 -64808034 + MIR SINE MIR 64 133 -129 298 74 37 0 chr20 1860211 1860265 -64807740 + (CA)n Simple_repeat Simple_repeat 2 57 0 207 328 0 0 chr20 1860581 1860642 -64807363 + L2 LINE L2 3203 3263 -50 325 211 19 10 chr20 1860762 1860866 -64807139 + (CA)n Simple_repeat Simple_repeat 1 105 0 231 319 0 0 chr20 1860893 1860984 -64807021 + L2 LINE L2 2882 2972 -300 251 224 26 53 chr20 1861051 1861127 -64806878 - MIR SINE MIR -90 118 45 197 306 266 8 chr20 1861203 1861327 -64806678 - L2 LINE L2 -1 3271 3116 283 212 204 9 chr20 1861644 1861757 -64806248 - MIR SINE MIR -96 166 32 407 179 36 0 chr20 1861965 1862049 -64805956 + MIR SINE MIR 70 156 -106 562 266 113 8 chr20 1862066 1862322 -64805683 + L2 LINE L2 2830 3112 -201 205 185 130 0 chr20 1862581 1862635 -64805370 + L2 LINE L2 3193 3253 -60 211 173 192 0 chr20 1863556 1863608 -64804397 - MIR SINE MIR -196 66 5 199 139 0 56 chr20 1863806 1863842 -64804163 + MER5A DNA MER1_type 156 189 0 561 231 51 19 chr20 1863937 1864093 -64803912 - MIR SINE MIR 0 262 102 258 306 102 27 chr20 1865235 1865382 -64802623 + MIR SINE MIR 1 158 -104 573 282 151 17 chr20 1865405 1866162 -64801843 - L2 LINE L2 -2 3311 2444 185 182 23 0 chr20 1866432 1866476 -64801529 - MIR SINE MIR -104 104 60 220 136 23 0 chr20 1866567 1866611 -64801394 + L2 LINE L2 2921 2965 -348 291 353 98 27 chr20 1867471 1867695 -64800310 - L2 LINE L2 -17 3255 3016 277 286 107 9 chr20 1867704 1867816 -64800189 - L2 LINE L2 -2 3311 3189 285 89 0 0 chr20 1867959 1868004 -64800001 + (GGGA)n Simple_repeat Simple_repeat 4 48 0 2313 79 0 28 chr20 1868147 1868464 -64799541 - AluSx SINE Alu -4 308 1 327 259 5 54 chr20 1869490 1869675 -64798330 + (CA)n Simple_repeat Simple_repeat 1 176 0 221 314 12 0 chr20 1869731 1869817 -64798188 + (CA)n Simple_repeat Simple_repeat 2 88 0 368 275 169 0 chr20 1870128 1870288 -64797717 + L3 LINE CR1 1391 1577 0 429 247 31 21 chr20 1870308 1870502 -64797503 - Charlie7 DNA MER1_type 0 2612 2417 563 304 72 36 chr20 1870524 1870774 -64797231 - MIR SINE MIR 0 262 4 490 220 10 0 chr20 1870956 1871056 -64796949 + MER5A DNA MER1_type 9 109 -80 548 265 309 8 chr20 1871267 1871717 -64796288 + L2 LINE L2 2725 3307 -6 246 213 118 88 chr20 1872107 1872243 -64795762 + MIR SINE MIR 53 192 -70 198 322 157 9 chr20 1872334 1872449 -64795556 + MIR3 SINE MIR 14 145 -63 1302 250 152 11 chr20 1872889 1873689 -64794316 - L2 LINE L2 -1 3312 2394 188 33 0 33 chr20 1873730 1873760 -64794245 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 277 219 287 1 chr20 1873779 1873903 -64794102 - MIR SINE MIR -51 157 1 637 309 36 5 chr20 1874130 1874353 -64793652 + MIR SINE MIR 13 242 -20 1032 215 0 0 chr20 1874837 1875023 -64792982 + MER5A DNA MER1_type 1 186 -3 972 191 0 5 chr20 1875184 1875373 -64792632 - AluJo SINE Alu -2 310 123 318 217 191 9 chr20 1875454 1875569 -64792436 - MIR SINE MIR -51 211 76 408 266 62 23 chr20 1875616 1875793 -64792212 - L2 LINE L2 -119 3194 3011 221 286 36 0 chr20 1875790 1875846 -64792159 + MIR3 SINE MIR 109 166 -42 * 183 270 234 27 chr20 1876353 1876464 -64791541 + MIR SINE MIR 85 218 -44 218 258 93 31 chr20 1876573 1876670 -64791335 - MIR SINE MIR -110 152 50 503 279 156 8 chr20 1876714 1876951 -64791054 - L2 LINE L2 -580 2734 2463 719 237 98 44 chr20 1876987 1877261 -64790744 + L2 LINE L2 3025 3313 0 363 268 102 13 chr20 1877849 1878006 -64789999 + L2 LINE L2 2618 2788 -526 297 274 244 17 chr20 1878096 1878326 -64789679 + L2 LINE L2 2944 3225 -88 550 266 136 14 chr20 1878425 1878639 -64789366 - MIR SINE MIR -5 257 18 300 279 117 9 chr20 1878745 1878856 -64789149 + MIR3 SINE MIR 33 155 -53 32 0 0 0 chr20 1879536 1879568 -64788437 + GC_rich Low_complexity Low_complexity 1 32 0 237 219 0 16 chr20 1879794 1879858 -64788147 + (CGGGG)n Simple_repeat Simple_repeat 1 63 0 21 36 0 0 chr20 1879926 1879954 -64788051 + GC_rich Low_complexity Low_complexity 1 28 0 28 71 0 0 chr20 1879968 1880024 -64787981 + GC_rich Low_complexity Low_complexity 1 56 0 23 78 0 0 chr20 1880239 1880290 -64787715 + GC_rich Low_complexity Low_complexity 1 51 0 275 283 7 36 chr20 1880361 1880538 -64787467 + CT-rich Low_complexity Low_complexity 6 268 0 22 0 0 0 chr20 1880569 1880591 -64787414 + GC_rich Low_complexity Low_complexity 1 22 0 28 29 0 0 chr20 1880740 1880775 -64787230 + GC_rich Low_complexity Low_complexity 1 35 0 365 146 195 0 chr20 1880940 1881022 -64786983 - MIR SINE MIR -69 139 42 193 269 0 19 chr20 1883825 1883877 -64784128 - MIR SINE MIR -60 148 98 257 296 0 0 chr20 1884431 1884502 -64783503 + L2 LINE L2 2704 2774 -540 233 345 0 23 chr20 1884655 1884742 -64783263 - MER103 DNA DNA -67 99 15 241 292 17 50 chr20 1884837 1884957 -64783048 + L2 LINE L2 2920 3035 -237 501 297 139 5 chr20 1885014 1885216 -64782789 + MIR SINE MIR 34 262 0 2233 65 41 0 chr20 1885379 1885671 -64782334 - AluSp SINE Alu -4 309 6 372 333 58 24 chr20 1886122 1886329 -64781676 - MIR SINE MIR -43 219 6 2386 90 0 0 chr20 1886447 1886758 -64781247 - AluSx SINE Alu -1 311 1 317 304 37 30 chr20 1887558 1887693 -64780312 - MIR SINE MIR -71 191 56 1095 253 104 23 chr20 1887753 1888017 -64779988 - L2 LINE L2 -4 3309 2993 2411 87 0 0 chr20 1888017 1888329 -64779676 + AluSx SINE Alu 1 312 0 1095 253 104 23 chr20 1888329 1888507 -64779498 - L2 LINE L2 -320 2993 2831 616 217 53 16 chr20 1888522 1888725 -64779280 - MIR SINE MIR -15 247 40 186 286 60 0 chr20 1888720 1888804 -64779201 + L2 LINE L2 2606 2694 -620 * 830 310 111 18 chr20 1888858 1889316 -64778689 + L2 LINE L2 2812 3312 -1 243 390 8 8 chr20 1889763 1889886 -64778119 + MIR SINE MIR 70 192 -70 210 321 30 30 chr20 1889977 1890108 -64777897 + MIR3 SINE MIR 64 194 -14 517 255 22 33 chr20 1890186 1890370 -64777635 + MIR SINE MIR 31 212 -50 257 206 221 59 chr20 1890622 1890758 -64777247 + MIR SINE MIR 34 191 -71 243 158 0 0 chr20 1890895 1890933 -64777072 + MIR SINE MIR 112 149 -59 392 285 162 39 chr20 1891359 1891538 -64776467 - MIR SINE MIR -17 245 45 585 297 151 34 chr20 1891550 1892186 -64775819 - L2 LINE L2 -39 3274 2461 235 273 191 0 chr20 1892252 1892362 -64775643 - MIR SINE MIR -115 147 17 440 328 119 25 chr20 1892774 1893094 -64774911 + L2 LINE L2 2923 3272 0 240 269 27 20 chr20 1893582 1893731 -64774274 + (CA)n Simple_repeat Simple_repeat 1 150 0 2298 94 0 0 chr20 1894787 1895084 -64772921 + AluSq SINE Alu 1 297 -16 375 226 0 12 chr20 1895183 1895267 -64772738 + L2 LINE L2 1912 1994 -1320 233 262 135 48 chr20 1895379 1895505 -64772500 + L2 LINE L2 3146 3282 -31 428 178 33 0 chr20 1895822 1895912 -64772093 - L2 LINE L2 -7 3306 3214 310 327 115 62 chr20 1895993 1896219 -64771786 - L1ME4a LINE L1 -11 6110 5873 352 303 101 0 chr20 1896610 1896729 -64771276 + L1ME4a LINE L1 5985 6115 -6 233 331 46 13 chr20 1896731 1896882 -64771123 - L1ME4a LINE L1 -242 5879 5724 259 333 0 0 chr20 1896971 1897049 -64770956 - L1ME4a LINE L1 -2214 5594 5517 351 322 68 11 chr20 1899448 1899625 -64768380 - MIR SINE MIR -48 214 28 262 278 26 0 chr20 1899655 1899745 -64768260 - MIR SINE MIR -66 142 104 354 273 133 0 chr20 1900011 1900139 -64767866 + L2 LINE L2 2899 3043 -229 299 284 147 0 chr20 1900167 1900262 -64767743 + MIR SINE MIR 96 204 -58 292 309 0 12 chr20 1900864 1900945 -64767060 - MIR SINE MIR -116 146 67 268 173 158 0 chr20 1900997 1901068 -64766937 - MIR3 SINE MIR -50 158 77 193 304 0 0 chr20 1901118 1901164 -64766841 - L2 LINE L2 -2 3270 3225 413 308 64 6 chr20 1901552 1901708 -64766297 - MIR3 SINE MIR -8 200 36 684 304 84 0 chr20 1901924 1902187 -64765818 - L1MC4a LINE L1 -1957 5851 5567 253 299 73 36 chr20 1902263 1902400 -64765605 - MIR3 SINE MIR -66 142 1 348 274 110 24 chr20 1902492 1902656 -64765349 - MIR SINE MIR -82 180 3 808 131 8 0 chr20 1902724 1902846 -64765159 + AluSg/x SINE Alu 177 299 -11 303 330 61 0 chr20 1903331 1903446 -64764559 + MIR SINE MIR 98 219 -43 2013 96 12 52 chr20 1903475 1903799 -64764206 - AluSq SINE Alu -2 311 1 408 261 27 0 chr20 1903816 1903927 -64764078 + MIR SINE MIR 79 192 -70 316 240 108 39 chr20 1903976 1904105 -64763900 + MIR SINE MIR 84 221 -41 686 295 59 25 chr20 1904141 1904378 -64763627 + MIR SINE MIR 14 258 -4 532 274 65 18 chr20 1904459 1904627 -64763378 - MER5B DNA MER1_type -2 176 1 215 211 0 0 chr20 1905282 1905320 -64762685 - L2 LINE L2 -18 3254 3217 197 264 132 23 chr20 1905378 1905507 -64762498 + MIR SINE MIR 108 250 -12 220 286 57 14 chr20 1906129 1906199 -64761806 - MIR SINE MIR -64 198 126 223 341 85 0 chr20 1906428 1906557 -64761448 + MIR SINE MIR 28 167 -95 183 356 0 0 chr20 1907382 1907441 -64760564 - MIR SINE MIR 0 262 204 364 304 22 71 chr20 1907997 1908181 -64759824 - HAL1b LINE L1 -5 1343 1169 242 276 23 23 chr20 1908340 1908427 -64759578 - L1MC/D LINE L1 -2057 5751 5665 388 286 48 75 chr20 1909000 1909228 -64758777 + MIR3 SINE MIR 32 252 -10 474 18 0 0 chr20 1909256 1909311 -64758694 + (TTGG)n Simple_repeat Simple_repeat 2 56 0 382 256 78 67 chr20 1909314 1909494 -64758511 - MIR SINE MIR -76 186 5 286 294 60 80 chr20 1910352 1910553 -64757452 - MLT1L LTR MaLR -222 393 197 236 226 122 43 chr20 1910573 1910688 -64757317 + MIR SINE MIR 139 262 0 208 171 24 0 chr20 1910816 1910857 -64757148 + (TG)n Simple_repeat Simple_repeat 1 42 0 318 332 168 5 chr20 1910899 1911089 -64756916 + MIR SINE MIR 29 249 -13 225 273 11 0 chr20 1911197 1911285 -64756720 + MER112 DNA MER1_type 111 199 -61 755 259 37 5 chr20 1911875 1912064 -64755941 - MIR SINE MIR -21 241 47 266 281 16 0 chr20 1912178 1912242 -64755763 + MIR SINE MIR 53 117 -91 246 303 30 40 chr20 1912683 1912782 -64755223 - MIR SINE MIR -86 122 25 245 336 143 0 chr20 1913545 1913664 -64754341 - L2 LINE L2 -1 3271 3136 452 263 42 63 chr20 1913707 1913897 -64754108 - L2 LINE L2 -1 3312 3127 674 279 65 0 chr20 1914194 1914409 -64753596 - MER46C DNA MER2_type -109 229 1 871 239 137 0 chr20 1914411 1914695 -64753310 - L2 LINE L2 -506 2808 2486 216 129 0 0 chr20 1915404 1915435 -64752570 + MER91 DNA MER1_type 78 108 -32 271 391 29 24 chr20 1915515 1915722 -64752283 + L2 LINE L2 3065 3272 0 2284 89 3 13 chr20 1915861 1916177 -64751828 - AluSp SINE Alu 0 313 1 571 254 18 127 chr20 1916265 1916396 -64751609 - MIR SINE MIR 0 262 177 870 158 152 0 chr20 1916396 1916560 -64751445 - MER5A DNA MER1_type 0 189 1 571 254 18 127 chr20 1916560 1916711 -64751294 - MIR SINE MIR -85 177 11 188 359 111 0 chr20 1917224 1917341 -64750664 - L2 LINE L2 -1 3271 3142 297 0 0 0 chr20 1917341 1917374 -64750631 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 889 295 123 22 chr20 1917375 1918223 -64749782 - L2 LINE L2 -14 3299 2364 323 307 114 29 chr20 1919206 1919346 -64748659 - L1ME4a LINE L1 0 6121 5970 547 295 74 50 chr20 1919545 1919908 -64748097 - L1ME4a LINE L1 -2116 5692 5321 211 217 43 0 chr20 1921007 1921053 -64746952 - L2 LINE L2 -4 3268 3221 332 328 84 8 chr20 1921195 1921379 -64746626 + MIR SINE MIR 3 205 -41 1019 195 49 26 chr20 1921594 1921820 -64746185 - MIR SINE MIR 0 262 32 181 320 0 0 chr20 1921974 1922024 -64745981 + L2 LINE L2 3223 3272 0 426 53 0 0 chr20 1923255 1923312 -64744693 + (CCA)n Simple_repeat Simple_repeat 2 58 0 227 162 0 0 chr20 1924068 1924105 -64743900 + MIR SINE MIR 116 152 -110 21 0 0 0 chr20 1924899 1924920 -64743085 + AT_rich Low_complexity Low_complexity 1 21 0 375 317 111 0 chr20 1925409 1925589 -64742416 + MIR SINE MIR 48 247 -15 208 358 158 18 chr20 1925638 1925803 -64742202 + MIR SINE MIR 69 256 -6 252 330 210 10 chr20 1925880 1926080 -64741925 - MIR SINE MIR -16 246 7 490 279 134 0 chr20 1926145 1926317 -64741688 - MIR SINE MIR -32 230 36 325 331 70 7 chr20 1926336 1926478 -64741527 - MIR SINE MIR -64 198 48 563 247 22 60 chr20 1927197 1927379 -64740626 - MIR SINE MIR -19 243 69 714 221 137 5 chr20 1927717 1927921 -64740084 + L1ME3 LINE L1 5926 6156 -6 424 325 35 6 chr20 1928278 1928447 -64739558 + MIR SINE MIR 77 250 -12 207 175 0 0 chr20 1928447 1928487 -64739518 + (CA)n Simple_repeat Simple_repeat 1 40 0 272 351 91 19 chr20 1928886 1929040 -64738965 - MIR SINE MIR -24 238 74 237 321 25 0 chr20 1929025 1929106 -64738899 - L2 LINE L2 -2 3311 3229 * 1072 246 58 50 chr20 1929221 1929603 -64738402 - LTR37B LTR ERV1 -78 390 6 197 346 0 63 chr20 1929623 1929750 -64738255 - L2 LINE L2 -200 3072 2954 * 260 333 113 0 chr20 1929748 1929925 -64738080 + L2 LINE L2 2774 2970 -344 216 373 73 17 chr20 1930010 1930187 -64737818 + L2 LINE L2 3120 3306 -7 192 220 18 9 chr20 1930190 1930299 -64737706 + (TGGA)n Simple_repeat Simple_repeat 2 111 0 227 200 36 18 chr20 1930299 1930354 -64737651 + GA-rich Low_complexity Low_complexity 2 57 0 1409 142 117 25 chr20 1931388 1931662 -64736343 - AluJo SINE Alu -11 301 3 768 182 134 32 chr20 1931662 1931880 -64736125 + L1ME1 LINE L1 5919 6161 -5 735 259 47 14 chr20 1931902 1932114 -64735891 - MIR SINE MIR 0 262 44 215 321 48 12 chr20 1932998 1933082 -64734923 - MIR SINE MIR -87 121 35 801 264 9 27 chr20 1933157 1933377 -64734628 + MIR SINE MIR 32 247 -15 261 0 0 0 chr20 1933518 1933547 -64734458 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 404 256 128 95 chr20 1933587 1933709 -64734296 - L2 LINE L2 -74 3239 3122 1542 176 6 61 chr20 1933709 1934039 -64733966 + AluSx SINE Alu 1 312 0 404 256 128 95 chr20 1934039 1934221 -64733784 - L2 LINE L2 -191 3122 2925 323 328 8 42 chr20 1934569 1934688 -64733317 - L1MC/D LINE L1 -2013 5795 5681 759 151 0 0 chr20 1935651 1935770 -64732235 - AluSg/x SINE Alu 0 310 192 2279 129 0 0 chr20 1935653 1935963 -64732042 - AluSx SINE Alu -2 310 1 380 332 94 47 chr20 1936034 1936269 -64731736 - MIR SINE MIR -2 260 15 613 165 112 41 chr20 1936577 1936747 -64731258 + MER53 DNA DNA 8 189 0 246 172 86 0 chr20 1937166 1937224 -64730781 + L2 LINE L2 2992 3054 -218 199 122 41 0 chr20 1937335 1937384 -64730621 + GA-rich Low_complexity Low_complexity 2 52 0 916 263 4 18 chr20 1937545 1937773 -64730232 + MIR SINE MIR 8 232 -30 361 259 184 49 chr20 1938010 1938195 -64729810 + MIR SINE MIR 37 246 -16 937 136 6 6 chr20 1938387 1938556 -64729449 + (GGAA)n Simple_repeat Simple_repeat 4 172 0 264 160 20 0 chr20 1938562 1938612 -64729393 + GA-rich Low_complexity Low_complexity 2 52 0 204 314 221 0 chr20 1939256 1939342 -64728663 - L2 LINE L2 -18 3295 3191 443 273 99 17 chr20 1939372 1939485 -64728520 + MER5A DNA MER1_type 4 137 -52 2492 37 40 3 chr20 1939485 1939784 -64728221 - AluY SINE Alu -1 310 1 443 273 99 17 chr20 1939784 1939842 -64728163 + MER5A DNA MER1_type 137 189 0 2127 133 7 7 chr20 1939935 1940237 -64727768 - AluSx SINE Alu -10 302 1 243 254 87 14 chr20 1940300 1940438 -64727567 - L1ME4a LINE L1 -29 6092 5945 2877 163 160 26 chr20 1940476 1941060 -64726945 + LTR48 LTR ERV1 1 694 -93 1690 193 3 25 chr20 1941060 1941376 -64726629 - AluJo SINE Alu -3 309 1 2877 163 160 26 chr20 1941376 1941485 -64726520 + LTR48 LTR ERV1 694 787 0 1018 166 44 0 chr20 1941491 1941672 -64726333 - MER5A DNA MER1_type 0 189 1 371 265 122 41 chr20 1941706 1941853 -64726152 + MIR SINE MIR 52 210 -52 763 281 83 17 chr20 1941982 1942323 -64725682 - L1ME4a LINE L1 -405 5716 5391 204 371 0 0 chr20 1942590 1942660 -64725345 - L2 LINE L2 -2 3270 3201 204 263 0 35 chr20 1942781 1942838 -64725167 + MIR SINE MIR 31 85 -177 3283 240 41 32 chr20 1943117 1943392 -64724613 + L1MEc LINE L1 247 518 -6089 1281 177 14 140 chr20 1943392 1943437 -64724568 + MLT1A1 LTR MaLR 1 50 -315 1719 182 10 23 chr20 1943437 1943739 -64724266 + AluJo SINE Alu 1 298 -14 1281 177 14 140 chr20 1943739 1944106 -64723899 + MLT1A1 LTR MaLR 50 361 -4 3283 240 41 32 chr20 1944106 1944948 -64723057 + L1MEc LINE L1 518 1455 -5152 236 230 27 0 chr20 1944985 1945059 -64722946 + L1MC4 LINE L1 6617 6692 -1350 180 0 0 0 chr20 1945067 1945087 -64722918 + (TA)n Simple_repeat Simple_repeat 2 21 0 302 200 75 0 chr20 1945100 1945180 -64722825 + L1MEc LINE L1 1455 1540 -4886 507 286 8 28 chr20 1945274 1945522 -64722483 + L1MEc LINE L1 1417 1659 -4767 1365 146 4 40 chr20 1945522 1945748 -64722257 + AluJb SINE Alu 87 304 -8 2770 192 25 27 chr20 1945749 1946422 -64721583 + L1MEc LINE L1 1849 2520 -4087 201 228 152 25 chr20 1946826 1946905 -64721100 - L3 LINE CR1 -1044 533 445 449 332 40 65 chr20 1946990 1947237 -64720768 - L2 LINE L2 0 3272 3032 360 279 89 32 chr20 1948053 1948243 -64719762 + L2 LINE L2 2840 3040 -232 246 231 0 0 chr20 1948492 1948557 -64719448 + GA-rich Low_complexity Low_complexity 1 65 0 285 247 12 0 chr20 1948567 1948648 -64719357 + (TGGA)n Simple_repeat Simple_repeat 4 85 0 314 284 6 0 chr20 1948666 1948842 -64719163 + (TGAA)n Simple_repeat Simple_repeat 4 180 0 23 0 0 0 chr20 1948862 1948885 -64719120 + AT_rich Low_complexity Low_complexity 1 23 0 415 216 0 0 chr20 1949002 1949076 -64718929 + L2 LINE L2 3240 3313 0 300 330 46 9 chr20 1949136 1949245 -64718760 + MIR SINE MIR 40 152 -56 3665 147 41 35 chr20 1949279 1949910 -64718095 - MER41B LTR ERV1 0 635 1 1570 177 126 49 chr20 1950126 1950556 -64717449 + MER31B LTR ERV1 2 464 -2 357 209 11 33 chr20 1951546 1951637 -64716368 - LTR16A1 LTR ERVL -128 329 241 950 290 21 39 chr20 1952945 1953215 -64714790 + MLT1J LTR MaLR 1 263 -248 2652 140 11 32 chr20 1953215 1953650 -64714355 + MSTB LTR MaLR 1 426 0 950 290 21 39 chr20 1953650 1953765 -64714240 + MLT1J LTR MaLR 263 379 -132 346 133 72 36 chr20 1953805 1953888 -64714117 + MLT1H LTR MaLR 38 123 -426 326 215 193 7 chr20 1954087 1954222 -64713783 + MLT1J LTR MaLR 382 541 -8 368 185 62 0 chr20 1954229 1954310 -64713695 + MLT1J LTR MaLR 389 474 -37 280 254 56 0 chr20 1954812 1954883 -64713122 + MIR SINE MIR 108 182 -80 522 276 45 49 chr20 1954989 1955174 -64712831 + L2 LINE L2 2830 3015 -298 2033 128 26 10 chr20 1955174 1955480 -64712525 - AluY SINE Alu 0 311 1 522 276 45 49 chr20 1955480 1955540 -64712465 + L2 LINE L2 3015 3074 -239 2193 138 41 0 chr20 1955603 1955993 -64712012 + L1MC2 LINE L1 5657 6062 -282 24 53 0 0 chr20 1955995 1956033 -64711972 + AT_rich Low_complexity Low_complexity 1 38 0 1054 191 103 39 chr20 1956052 1956307 -64711698 + L1MC2 LINE L1 6045 6282 -62 2144 108 21 0 chr20 1956307 1956593 -64711412 + AluSx SINE Alu 1 292 -20 1054 191 103 39 chr20 1956593 1956605 -64711400 + L1MC2 LINE L1 6282 6292 -52 2415 92 0 9 chr20 1956605 1956920 -64711085 - AluSq SINE Alu -1 312 1 1054 191 103 39 chr20 1956920 1956933 -64711072 + L1MC2 LINE L1 6292 6344 0 820 239 136 35 chr20 1957256 1957624 -64710381 - MER113 DNA MER1_type? -114 407 3 386 245 66 0 chr20 1957763 1957869 -64710136 + MER94 DNA DNA 2 114 -20 589 231 48 14 chr20 1959139 1959286 -64708719 + L2 LINE L2 2650 2801 -513 690 302 74 55 chr20 1959406 1959880 -64708125 + L2 LINE L2 2831 3313 0 188 125 62 0 chr20 1959983 1960015 -64707990 - MIR SINE MIR -112 150 117 439 285 44 7 chr20 1961014 1961151 -64706854 + L1ME3 LINE L1 6021 6162 0 496 268 91 25 chr20 1961286 1961484 -64706521 + MLT1K LTR MaLR 317 527 -61 351 265 140 7 chr20 1961579 1961715 -64706290 - MIR SINE MIR -89 173 20 263 259 70 49 chr20 1961896 1962039 -64705966 + Charlie8 DNA MER1_type 50 195 -2222 561 298 55 38 chr20 1962201 1962436 -64705569 + MLT1K LTR MaLR 25 263 -325 559 253 104 11 chr20 1962462 1962644 -64705361 + MLT1K LTR MaLR 320 518 -70 401 321 121 38 chr20 1962753 1962993 -64705012 + L3 LINE CR1 1311 1570 -7 592 294 75 43 chr20 1963001 1963280 -64704725 + L2 LINE L2 3024 3311 -2 648 271 96 0 chr20 1963659 1963825 -64704180 - MIR SINE MIR 0 262 81 279 0 0 0 chr20 1963908 1963939 -64704066 + (TG)n Simple_repeat Simple_repeat 2 32 0 249 33 0 0 chr20 1965326 1965356 -64702649 + (CTG)n Simple_repeat Simple_repeat 1 30 0 220 291 100 27 chr20 1966426 1966536 -64701469 - MIR3 SINE MIR -77 131 14 2060 146 0 0 chr20 1966932 1967253 -64700752 + AluSx SINE Alu 2 322 0 2014 155 0 0 chr20 1967266 1967562 -64700443 + AluSx SINE Alu 5 300 -12 354 308 110 14 chr20 1967578 1967724 -64700281 - MIR3 SINE MIR -45 163 4 204 224 35 17 chr20 1968507 1968565 -64699440 - MIR SINE MIR -63 145 87 342 314 152 21 chr20 1968582 1968773 -64699232 - MIR SINE MIR -19 243 28 687 281 62 31 chr20 1969099 1969359 -64698646 + L2 LINE L2 2828 3095 -177 837 275 83 54 chr20 1969463 1969870 -64698135 + L2 LINE L2 2895 3313 0 2067 151 0 0 chr20 1969905 1970197 -64697808 + AluSx SINE Alu 2 293 -19 402 272 49 22 chr20 1970809 1970955 -64697050 - MIR SINE MIR -50 212 64 730 278 58 0 chr20 1971395 1971600 -64696405 - MIR SINE MIR -44 218 2 201 297 119 0 chr20 1971677 1971778 -64696227 + L2 LINE L2 2643 2755 -559 508 311 42 32 chr20 1971827 1972017 -64695988 - MIR SINE MIR -3 259 68 435 232 101 116 chr20 1972082 1972289 -64695716 + L2 LINE L2 2902 3105 -167 270 322 91 10 chr20 1972331 1972530 -64695475 - L2 LINE L2 -367 2947 2733 279 0 0 0 chr20 1972536 1972567 -64695438 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 389 248 0 44 chr20 1972640 1972753 -64695252 + Charlie8 DNA MER1_type 98 205 -2212 656 275 66 37 chr20 1972948 1973165 -64694840 + MIR SINE MIR 16 241 -21 492 306 35 30 chr20 1973373 1973572 -64694433 - MIR SINE MIR -3 259 60 473 196 9 54 chr20 1974098 1974210 -64693795 + MLT2D LTR ERVL 307 413 -1 660 222 7 7 chr20 1974211 1974355 -64693650 + MER58B DNA MER1_type 194 337 -4 262 322 30 26 chr20 1974968 1975104 -64692901 - MIR SINE MIR -61 147 19 214 266 119 46 chr20 1975214 1975323 -64692682 - MIR SINE MIR -90 172 56 291 343 56 11 chr20 1975370 1975548 -64692457 - MIR SINE MIR -37 225 40 303 322 0 0 chr20 1976028 1976221 -64691784 + GA-rich Low_complexity Low_complexity 1 193 0 341 272 20 20 chr20 1976235 1976382 -64691623 + GA-rich Low_complexity Low_complexity 1 147 0 651 266 99 21 chr20 1977346 1977538 -64690467 - MIR SINE MIR -8 254 48 210 272 49 37 chr20 1977532 1977613 -64690392 - L2 LINE L2 -41 3272 3191 * 189 0 0 0 chr20 1978340 1978361 -64689644 + (T)n Simple_repeat Simple_repeat 1 21 0 263 272 52 35 chr20 1979653 1979682 -64688323 + (CAGAGA)n Simple_repeat Simple_repeat 4 31 -148 204 40 0 0 chr20 1979682 1979707 -64688298 + (GA)n Simple_repeat Simple_repeat 2 26 0 263 272 52 35 chr20 1979707 1979850 -64688155 + (CAGAGA)n Simple_repeat Simple_repeat 31 179 0 * 327 330 0 0 chr20 1979750 1979933 -64688072 + GA-rich Low_complexity Low_complexity 1 183 0 462 303 52 7 chr20 1980510 1980665 -64687340 - MIR SINE MIR -73 189 28 460 313 49 0 chr20 1980921 1981084 -64686921 + MIR SINE MIR 49 219 -43 333 0 0 0 chr20 1982053 1982090 -64685915 + (CA)n Simple_repeat Simple_repeat 2 38 0 195 268 61 61 chr20 1982226 1982308 -64685697 + MIR SINE MIR 37 118 -144 668 309 36 0 chr20 1982552 1982804 -64685201 - MIR SINE MIR 0 262 2 183 205 0 0 chr20 1983106 1983145 -64684860 + CT-rich Low_complexity Low_complexity 2 40 0 710 293 40 63 chr20 1983149 1983528 -64684477 - L2 LINE L2 -5 3267 2898 1016 263 186 21 chr20 1983568 1983708 -64684297 + L2 LINE L2 2553 2669 -644 2372 120 0 0 chr20 1983708 1984017 -64683988 + AluSq SINE Alu 1 309 -4 1016 263 186 21 chr20 1984017 1984517 -64683488 + L2 LINE L2 2669 3311 -2 219 304 59 29 chr20 1984523 1984625 -64683380 - L2 LINE L2 -413 2901 2797 246 333 128 55 chr20 1984741 1984960 -64683045 - L2 LINE L2 -51 3221 2987 975 168 30 15 chr20 1984998 1985200 -64682805 + L1MB4 LINE L1 5500 5704 -476 201 74 0 0 chr20 1985200 1985227 -64682778 + (CAT)n Simple_repeat Simple_repeat 1 27 0 363 227 0 0 chr20 1985230 1985296 -64682709 - AluJ/FRAM SINE Alu -16 286 221 740 188 8 0 chr20 1985303 1985450 -64682555 - FLAM_C SINE Alu 0 148 1 1846 201 5 10 chr20 1985451 1985849 -64682156 + L1MB4 LINE L1 5701 6096 -84 678 301 55 17 chr20 1985934 1986170 -64681835 - MIR SINE MIR -6 256 12 520 281 69 31 chr20 1986221 1986463 -64681542 - MIR SINE MIR -13 249 3 587 267 109 9 chr20 1986762 1986983 -64681022 - MIR SINE MIR 0 262 20 310 335 51 51 chr20 1987288 1987563 -64680442 - L2 LINE L2 -4 3268 2994 257 356 11 0 chr20 1988028 1988118 -64679887 - LTR67 LTR ERVL -387 170 80 235 259 177 13 chr20 1988335 1988493 -64679512 - MIR3 SINE MIR -19 189 6 477 280 64 13 chr20 1988578 1988735 -64679270 + MIR SINE MIR 20 184 -78 202 369 6 0 chr20 1989064 1989224 -64678781 + (CA)n Simple_repeat Simple_repeat 2 162 0 207 0 0 0 chr20 1989488 1989511 -64678494 + (TC)n Simple_repeat Simple_repeat 2 24 0 868 222 81 17 chr20 1989943 1990177 -64677828 + MIR SINE MIR 2 250 -12 1077 288 107 11 chr20 1990256 1990694 -64677311 + L2 LINE L2 2834 3313 0 372 317 10 0 chr20 1991641 1991745 -64676260 + L2 LINE L2 3168 3272 0 324 264 109 15 chr20 1991750 1991903 -64676102 - MIR SINE MIR -61 147 22 242 327 10 50 chr20 1991970 1992071 -64675934 + MIR SINE MIR 56 152 -56 343 357 8 0 chr20 1993006 1993135 -64674870 + MIR SINE MIR 21 150 -58 1138 225 125 19 chr20 1993154 1993630 -64674375 - MLT1G LTR MaLR -2 593 1 358 300 61 22 chr20 1993712 1993950 -64674055 + L2 LINE L2 2750 2993 -279 263 191 0 0 chr20 1994175 1994222 -64673783 + L2 LINE L2 3262 3308 -5 511 321 115 46 chr20 1994632 1995538 -64672467 - L2 LINE L2 -35 3237 2268 209 203 68 0 chr20 1995962 1996021 -64671984 + MIR3 SINE MIR 119 181 -27 262 324 176 0 chr20 1996044 1996306 -64671699 + L2 LINE L2 1898 2205 -1109 438 20 0 0 chr20 1996514 1996565 -64671440 + (TC)n Simple_repeat Simple_repeat 2 52 0 4661 223 58 53 chr20 1996764 1997592 -64670413 + L1ME1 LINE L1 785 1608 -4798 1734 187 3 10 chr20 1997592 1997881 -64670124 + AluJo SINE Alu 1 287 -25 4661 223 58 53 chr20 1997881 1998270 -64669735 + L1ME1 LINE L1 1608 1994 -4412 2142 129 0 16 chr20 1998270 1998587 -64669418 + AluSx SINE Alu 1 312 0 4661 223 58 53 chr20 1998587 2000409 -64667596 + L1ME1 LINE L1 1994 3798 -2608 6528 159 35 9 chr20 2000432 2000775 -64667230 + Tigger3b DNA MER2_type 1 334 -2694 2479 35 3 7 chr20 2000775 2001116 -64666889 + AluY SINE Alu 1 311 0 6528 159 35 9 chr20 2001116 2001466 -64666539 + Tigger3b DNA MER2_type 334 673 -2355 2342 91 10 3 chr20 2001466 2001775 -64666230 + AluSp SINE Alu 1 311 -2 6528 159 35 9 chr20 2001775 2002280 -64665725 + Tigger3b DNA MER2_type 673 1231 0 261 167 0 0 chr20 2002301 2002355 -64665650 + (CA)n Simple_repeat Simple_repeat 1 54 0 5351 226 81 12 chr20 2002367 2004045 -64663960 + L1ME1 LINE L1 4052 5827 -599 883 286 71 15 chr20 2004054 2004393 -64663612 + L1ME1 LINE L1 6019 6376 -50 1066 205 136 33 chr20 2004433 2004764 -64663241 + HAL1b LINE L1 438 802 -546 1149 157 0 40 chr20 2004765 2004963 -64663042 + AluJo SINE Alu 84 273 -39 606 250 56 10 chr20 2004986 2005182 -64662823 + HAL1b LINE L1 792 996 -352 * 1256 194 17 35 chr20 2005173 2005461 -64662544 - L1MD3 LINE L1 -1 7994 7712 326 250 93 58 chr20 2005519 2005691 -64662314 - MLT1J LTR MaLR -331 180 3 350 231 11 11 chr20 2005984 2006075 -64661930 - MIR SINE MIR -3 259 169 310 291 0 0 chr20 2006080 2006159 -64661846 + L2 LINE L2 3219 3297 -16 242 200 0 18 chr20 2006184 2006239 -64661766 - MIR SINE MIR -112 150 97 181 293 133 28 chr20 2006397 2006578 -64661427 + L2 LINE L2 2776 2975 -339 2441 55 0 0 chr20 2006691 2007007 -64660998 - AluY SINE Alu 0 311 1 499 274 25 40 chr20 2007015 2007216 -64660789 + L2 LINE L2 3116 3313 0 191 258 0 31 chr20 2007222 2007350 -64660655 + (TGGA)n Simple_repeat Simple_repeat 4 127 0 271 287 22 44 chr20 2007948 2008084 -64659921 - L2 LINE L2 -4 3268 3136 532 239 71 92 chr20 2008101 2008340 -64659665 + MIR SINE MIR 14 247 -15 705 238 26 43 chr20 2008359 2008590 -64659415 - MIR SINE MIR -4 258 32 652 255 22 11 chr20 2009004 2009188 -64658817 - MIR SINE MIR -67 195 10 254 287 66 30 chr20 2009187 2009354 -64658651 - MIR SINE MIR -39 223 51 * 209 263 53 0 chr20 2010218 2010294 -64657711 + MER5B DNA MER1_type 52 131 -47 250 267 0 81 chr20 2010371 2010457 -64657548 + L2 LINE L2 3026 3104 -168 256 241 0 0 chr20 2010921 2010979 -64657026 + MLT1K LTR MaLR 196 253 -335 401 87 43 0 chr20 2010996 2011065 -64656940 - L1MA8 LINE L1 -2 6289 6218 462 168 32 0 chr20 2011177 2011271 -64656734 - MER2 DNA MER2_type -139 206 110 7904 158 101 20 chr20 2011271 2012816 -64655189 - MER52A LTR ERV1 0 1755 1 517 214 8 26 chr20 2012814 2012834 -64655171 - MER2 DNA MER2_type -230 115 96 * 1391 177 79 37 chr20 2012834 2013162 -64654843 + MER2 DNA MER2_type 2 343 -1 517 214 8 26 chr20 2013162 2013258 -64654747 - MER2 DNA MER2_type -249 96 1 3318 142 25 30 chr20 2013258 2013851 -64654154 - L1MA8 LINE L1 -70 6221 5632 487 297 38 71 chr20 2013927 2014193 -64653812 + MLT1K LTR MaLR 329 585 -3 1812 247 77 38 chr20 2014556 2015115 -64652890 - MLT1G LTR MaLR 0 590 10 1226 250 56 22 chr20 2015250 2015610 -64652395 - MLT1K LTR MaLR -1 587 216 813 276 99 38 chr20 2015661 2016128 -64651877 - L1ME4a LINE L1 -204 5917 5417 2330 96 0 7 chr20 2016128 2016431 -64651574 - AluSc SINE Alu -8 301 1 813 276 99 38 chr20 2016431 2016460 -64651545 - L1ME4a LINE L1 -704 5417 5391 279 198 49 49 chr20 2017183 2017264 -64650741 - MIR SINE MIR -95 167 87 270 0 0 0 chr20 2017488 2017518 -64650487 + (CA)n Simple_repeat Simple_repeat 1 30 0 601 274 87 10 chr20 2017943 2018151 -64649854 + MLT1K LTR MaLR 363 586 -2 715 312 64 11 chr20 2018299 2018581 -64649424 + HAL1 LINE L1 32 328 -2179 373 202 65 40 chr20 2018683 2018807 -64649198 + HAL1 LINE L1 615 741 -1766 880 248 103 78 chr20 2018995 2019624 -64648381 + L1MC4 LINE L1 7168 7808 0 539 248 35 0 chr20 2019673 2019814 -64648191 + MIR SINE MIR 91 236 -26 234 264 178 61 chr20 2020053 2020250 -64647755 + MLT1K LTR MaLR 62 281 -307 714 241 92 11 chr20 2020786 2021031 -64646974 + MIR SINE MIR 6 262 0 194 304 98 0 chr20 2021060 2021172 -64646833 - L2 LINE L2 -13 3259 3137 311 269 46 8 chr20 2021611 2021741 -64646264 + (TGGA)n Simple_repeat Simple_repeat 4 138 0 408 223 62 0 chr20 2021757 2022075 -64645930 + (TGGA)n Simple_repeat Simple_repeat 1 337 0 414 300 132 14 chr20 2022201 2022421 -64645584 - MIR SINE MIR 0 262 17 181 278 256 0 chr20 2022483 2022573 -64645432 - L2 LINE L2 -215 3057 2945 748 227 20 10 chr20 2022720 2022923 -64645082 - MIR SINE MIR -56 206 2 362 292 18 9 chr20 2023205 2023318 -64644687 + MIR3 SINE MIR 81 194 -14 787 255 123 13 chr20 2023887 2024122 -64643883 + MIR SINE MIR 2 262 0 589 198 16 0 chr20 2024213 2024334 -64643671 + MER5A DNA MER1_type 44 166 -23 214 224 168 37 chr20 2024406 2024513 -64643492 + MIR SINE MIR 76 196 -66 230 238 167 0 chr20 2024732 2024816 -64643189 + MIR SINE MIR 94 191 -71 334 264 66 0 chr20 2024837 2024943 -64643062 - L2 LINE L2 -21 3251 3139 1886 143 7 32 chr20 2025165 2025473 -64642532 - AluSx SINE Alu -12 300 1 185 338 38 12 chr20 2025506 2025586 -64642419 - L2 LINE L2 -544 2770 2689 2247 103 0 3 chr20 2025593 2025885 -64642120 + AluSx SINE Alu 5 295 -17 877 236 41 5 chr20 2025894 2026089 -64641916 + L1ME1 LINE L1 5471 5672 -494 1645 145 44 29 chr20 2026089 2026630 -64641375 + LTR36 LTR ERV1 1 611 0 1755 206 7 119 chr20 2026634 2027179 -64640826 + L1ME1 LINE L1 5671 6154 -12 252 241 80 9 chr20 2027226 2027338 -64640667 - L2 LINE L2 -674 2640 2521 368 316 129 0 chr20 2027889 2028044 -64639961 + MIR3 SINE MIR 13 187 -21 937 205 0 11 chr20 2028308 2028493 -64639512 + MER3 DNA MER1_type 2 184 -25 1064 247 11 127 chr20 2028535 2029062 -64638943 + LTR41 LTR ERVL 1 466 -307 1104 206 24 69 chr20 2029105 2029427 -64638578 + LTR41 LTR ERVL 468 795 0 683 317 63 59 chr20 2029751 2030679 -64637326 + ERVL LTR ERVL 412 1344 -4310 * 1585 273 16 16 chr20 2030677 2031115 -64636890 + ERVL LTR ERVL 4883 5321 -438 1705 178 7 7 chr20 2031115 2031396 -64636609 + AluJb SINE Alu 1 281 -31 1569 248 79 60 chr20 2031822 2032354 -64635651 + MLT1E LTR MaLR 1 542 -51 3783 194 49 11 chr20 2032386 2033180 -64634825 - L1MB7 LINE L1 -54 6130 5267 2234 127 3 0 chr20 2033180 2033487 -64634518 - AluSq SINE Alu -5 308 1 3783 194 49 11 chr20 2033487 2034042 -64633963 - L1MB7 LINE L1 -917 5267 4734 1003 194 60 187 chr20 2034111 2034865 -64633140 + LTR41 LTR ERVL 6 663 -110 1685 162 20 37 chr20 2035057 2035353 -64632652 - AluJo SINE Alu -21 291 1 2332 106 6 0 chr20 2035364 2035675 -64632330 - AluSq SINE Alu 0 313 1 1390 250 142 7 chr20 2035761 2036177 -64631828 - LTR16C LTR ERVL 0 491 20 244 182 45 45 chr20 2036186 2036252 -64631753 + MIR SINE MIR 112 177 -85 272 265 154 0 chr20 2036451 2036587 -64631418 - MIR SINE MIR -102 160 4 620 179 9 0 chr20 2037277 2037380 -64630625 + MLT1J1 LTR MaLR 13 116 -330 620 240 137 6 chr20 2037380 2037563 -64630442 + MER63B DNA MER1_type 1 207 -229 1014 303 17 7 chr20 2037631 2037925 -64630080 - LTR16A LTR ERVL -32 418 122 342 282 9 9 chr20 2037991 2038101 -64629904 - MIR SINE MIR -85 177 68 364 232 9 27 chr20 2038248 2038360 -64629645 - MARNA DNA Mariner -170 416 307 295 240 44 12 chr20 2038526 2038617 -64629388 + MIR SINE MIR 61 152 -61 685 282 70 25 chr20 2038634 2038875 -64629130 + MIR SINE MIR 8 259 -3 1870 259 57 18 chr20 2038985 2039480 -64628525 - MLT1G1 LTR MaLR -9 586 73 378 260 30 0 chr20 2039833 2039933 -64628072 + MIR SINE MIR 90 192 -70 416 165 89 101 chr20 2040159 2040317 -64627688 + L1ME4a LINE L1 5955 6110 -11 324 70 0 0 chr20 2040319 2040362 -64627643 + (CA)n Simple_repeat Simple_repeat 2 44 0 316 269 112 14 chr20 2040435 2040587 -64627418 - MER20B DNA MER1_type 0 219 53 295 283 173 37 chr20 2040589 2040780 -64627225 + L1MC4 LINE L1 7800 8016 -26 2404 65 0 14 chr20 2041457 2041749 -64626256 + AluY SINE Alu 1 288 -23 252 185 0 19 chr20 2041753 2041807 -64626198 - L2 LINE L2 -13 3259 3207 1972 232 23 0 chr20 2042042 2042469 -64625536 + MER110 LTR ERV1 46 482 -9 301 276 163 0 chr20 2042483 2042606 -64625399 - MIR SINE MIR -23 239 97 5874 101 3 27 chr20 2042606 2042753 -64625252 + L1PA11 LINE L1 5329 5478 -696 1459 214 3 35 chr20 2042753 2043071 -64624934 + AluJb SINE Alu 1 308 -4 5874 101 3 27 chr20 2043071 2043782 -64624223 + L1PA11 LINE L1 5478 6167 -7 328 250 0 0 chr20 2043782 2043866 -64624139 - MIR SINE MIR -163 99 16 1690 251 135 15 chr20 2043888 2044413 -64623592 - MLT1G1 LTR MaLR -7 588 1 580 296 97 8 chr20 2044619 2045041 -64622964 + LTR33 LTR ERVL 19 521 0 251 346 0 12 chr20 2045132 2045213 -64622792 - L2 LINE L2 -211 3061 2982 356 175 32 0 chr20 2045240 2045303 -64622702 - MIR SINE MIR -67 141 77 1213 209 106 9 chr20 2045508 2045829 -64622176 + L1ME3 LINE L1 4497 4848 -1298 1720 158 17 31 chr20 2045948 2046240 -64621765 + AluJo SINE Alu 12 299 -13 478 247 67 3 chr20 2046241 2046436 -64621569 + L1ME3 LINE L1 5771 5979 -183 2940 147 33 0 chr20 2046440 2046931 -64621074 + L1MB2 LINE L1 5319 5825 -346 5189 53 0 3 chr20 2046933 2047572 -64620433 + L1PA8 LINE L1 5536 6172 0 1890 161 14 11 chr20 2047572 2047919 -64620086 + L1MB2 LINE L1 5821 6169 -2 823 176 12 18 chr20 2047961 2048126 -64619879 + L1ME3 LINE L1 5998 6161 -1 670 277 106 25 chr20 2048139 2048421 -64619584 - MLT1L LTR MaLR -153 462 158 2085 113 7 0 chr20 2048478 2048808 -64619197 - AluSx SINE Alu 0 332 1 2305 88 3 3 chr20 2049308 2049603 -64618402 - AluSc SINE Alu -14 295 1 332 259 75 58 chr20 2049608 2049782 -64618223 - MER5B DNA MER1_type -1 177 1 2126 99 8 74 chr20 2050007 2050360 -64617645 + MER1B DNA MER1_type 1 330 -9 621 241 128 5 chr20 2050361 2050548 -64617457 + MLT1L LTR MaLR 400 609 -6 1310 191 40 20 chr20 2050552 2050804 -64617201 - AluJo SINE Alu -54 258 2 23 54 0 0 chr20 2050863 2050900 -64617105 + AT_rich Low_complexity Low_complexity 1 37 0 2136 139 0 0 chr20 2050978 2051273 -64616732 + AluSx SINE Alu 1 295 -17 888 245 64 19 chr20 2051896 2052161 -64615844 - L1ME4a LINE L1 -296 5825 5549 1074 149 11 0 chr20 2052714 2052895 -64615110 + L1MB3 LINE L1 6001 6183 0 11684 179 44 58 chr20 2052909 2055145 -64612860 + L1MC1 LINE L1 19 2283 -4143 2254 165 41 10 chr20 2055145 2055558 -64612447 - MSTA LTR MaLR 0 428 3 11684 179 44 58 chr20 2055558 2055778 -64612227 + L1MC1 LINE L1 2283 2504 -3922 2316 97 3 3 chr20 2055778 2056078 -64611927 + AluSg SINE Alu 2 301 -9 11684 179 44 58 chr20 2056078 2056228 -64611777 + L1MC1 LINE L1 2504 2654 -3772 2215 118 0 3 chr20 2056228 2056525 -64611480 + AluSc SINE Alu 1 296 -13 11684 179 44 58 chr20 2056525 2056717 -64611288 + L1MC1 LINE L1 2654 2847 -3579 2011 155 7 0 chr20 2056717 2057027 -64610978 + AluJo SINE Alu 1 312 0 11684 179 44 58 chr20 2057027 2057298 -64610707 + L1MC1 LINE L1 2847 3120 -3306 2304 104 3 0 chr20 2057298 2057595 -64610410 + AluSp SINE Alu 1 298 -15 11684 179 44 58 chr20 2057595 2057869 -64610136 + L1MC1 LINE L1 3120 3396 -3030 2162 137 0 3 chr20 2057869 2058176 -64609829 + AluSx SINE Alu 1 306 -6 11684 179 44 58 chr20 2058176 2058379 -64609626 + L1MC1 LINE L1 3396 3600 -2826 2216 112 0 7 chr20 2058379 2058682 -64609323 + AluSg SINE Alu 1 301 -9 11684 179 44 58 chr20 2058682 2059023 -64608982 + L1MC1 LINE L1 3600 3853 -2573 1714 168 0 30 chr20 2059033 2059513 -64608492 + AluJo SINE Alu 7 477 0 1637 223 216 59 chr20 2059548 2059960 -64608045 + L1MC1 LINE L1 3843 4189 -2237 816 161 23 0 chr20 2059960 2060090 -64607915 + FLAM_A SINE Alu 1 133 0 1637 223 216 59 chr20 2060090 2060665 -64607340 + L1MC1 LINE L1 4189 4985 -1441 235 229 16 0 chr20 2060678 2060739 -64607266 + L1MC1 LINE L1 4961 5022 -1404 542 138 0 0 chr20 2060756 2060836 -64607169 + FRAM SINE Alu 35 114 -62 315 0 0 0 chr20 2061185 2061220 -64606785 + (CA)n Simple_repeat Simple_repeat 2 36 0 6442 171 16 28 chr20 2061223 2062828 -64605177 + L1MC1 LINE L1 5023 6613 0 561 30 0 0 chr20 2062868 2062935 -64605070 + (TA)n Simple_repeat Simple_repeat 2 68 0 1287 107 6 0 chr20 2062935 2063113 -64604892 - AluSq SINE Alu -1 312 134 2271 48 25 67 chr20 2063113 2063428 -64604577 - AluY SINE Alu -9 302 1 2296 111 0 0 chr20 2063567 2063873 -64604132 + AluSg SINE Alu 1 306 -4 342 307 24 8 chr20 2064189 2064316 -64603689 - LTR67 LTR ERVL -2 555 427 248 291 45 55 chr20 2064418 2064528 -64603477 + LTR16C LTR ERVL 87 195 -296 598 267 46 20 chr20 2064570 2064765 -64603240 + LTR16C LTR ERVL 284 483 -8 526 292 36 105 chr20 2064767 2065205 -64602800 - LTR67 LTR ERVL -126 431 24 336 368 23 18 chr20 2065722 2065893 -64602112 - L2 LINE L2 -214 3058 2887 589 292 103 80 chr20 2066147 2066856 -64601149 - HAL1 LINE L1 -1606 901 177 319 137 0 95 chr20 2067017 2067112 -64600893 + L1MB2 LINE L1 6082 6167 -4 819 201 0 0 chr20 2067299 2067443 -64600562 + MER5A DNA MER1_type 9 152 -37 462 303 31 6 chr20 2067614 2067776 -64600229 - MIR SINE MIR -5 257 92 2352 98 0 0 chr20 2067845 2068140 -64599865 - AluSc SINE Alu -14 295 1 211 296 31 31 chr20 2068212 2068310 -64599695 + L2 LINE L2 2979 3076 -196 4998 180 67 22 chr20 2068398 2068510 -64599495 + L1MD2 LINE L1 4921 5027 -1332 1734 173 3 26 chr20 2068510 2068817 -64599188 - AluJo SINE Alu -12 300 1 4998 180 67 22 chr20 2068817 2069259 -64598746 + L1MD2 LINE L1 5027 5448 -911 2350 99 0 0 chr20 2069259 2069552 -64598453 + AluSx SINE Alu 1 293 -19 4998 180 67 22 chr20 2069552 2070272 -64597733 + L1MD2 LINE L1 5448 6252 -107 401 113 32 0 chr20 2070311 2070373 -64597632 + L1MC/D LINE L1 5504 5567 -675 521 105 47 0 chr20 2070378 2070464 -64597541 + L1MD2 LINE L1 6266 6355 -4 1688 168 67 101 chr20 2070465 2070779 -64597226 - Charlie1b DNA MER1_type -2289 472 178 1334 184 21 0 chr20 2070779 2071013 -64596992 - MER8 DNA MER2_type 0 239 1 1688 168 67 101 chr20 2071013 2071174 -64596831 - Charlie1b DNA MER1_type -2583 178 13 210 178 22 0 chr20 2071233 2071278 -64596727 + L2 LINE L2 3188 3233 -39 213 132 0 0 chr20 2071280 2071318 -64596687 + (GA)n Simple_repeat Simple_repeat 2 39 0 727 313 144 18 chr20 2072136 2072475 -64595530 - MLT1J LTR MaLR -31 480 99 802 144 83 72 chr20 2072684 2072808 -64595197 - MER5A DNA MER1_type 0 189 61 2251 105 13 3 chr20 2072808 2073114 -64594891 - AluSc SINE Alu 0 309 1 802 144 83 72 chr20 2073114 2073170 -64594835 - MER5A DNA MER1_type -128 61 7 807 269 96 15 chr20 2073568 2073903 -64594102 + L1MC4a LINE L1 5455 5816 -1992 250 241 0 72 chr20 2073990 2074073 -64593932 + L1MC4a LINE L1 6057 6133 -1675 282 255 217 0 chr20 2074115 2074221 -64593784 - MIR SINE MIR -37 225 97 749 232 24 6 chr20 2074241 2074405 -64593600 + MER63A DNA MER1_type 39 205 -5 368 254 55 9 chr20 2074850 2074960 -64593045 + MIR SINE MIR 36 150 -112 2152 116 30 3 chr20 2075013 2075314 -64592691 + AluJb SINE Alu 1 309 -3 22 0 0 0 chr20 2075962 2075984 -64592021 + AT_rich Low_complexity Low_complexity 1 22 0 2470 78 0 13 chr20 2076305 2076614 -64591391 - AluSx SINE Alu -7 305 1 569 223 157 6 chr20 2076615 2076781 -64591224 + MIR SINE MIR 72 262 0 270 328 141 8 chr20 2076798 2076926 -64591079 + L2 LINE L2 3119 3263 -9 204 271 0 0 chr20 2077190 2077238 -64590767 + L2 LINE L2 3266 3313 0 603 272 59 25 chr20 2077488 2077727 -64590278 + MIR SINE MIR 15 261 -1 443 244 80 63 chr20 2077885 2077934 -64590071 - L1ME LINE L1 -352 5769 5722 189 0 0 0 chr20 2077934 2077955 -64590050 + (TA)n Simple_repeat Simple_repeat 1 21 0 443 244 80 63 chr20 2077955 2078143 -64589862 - L1ME LINE L1 -399 5722 5528 237 269 15 0 chr20 2078564 2078631 -64589374 - MER113 DNA MER1_type? 0 521 454 1051 200 130 82 chr20 2078732 2079232 -64588773 - HAL1 LINE L1 -4 2503 1980 787 211 5 52 chr20 2079301 2079495 -64588510 + MER5A DNA MER1_type 2 186 -3 324 357 23 29 chr20 2079501 2079611 -64588394 + MIR SINE MIR 12 122 -140 1909 153 7 0 chr20 2079611 2079905 -64588100 - AluSx SINE Alu -16 296 1 324 357 23 29 chr20 2079905 2079965 -64588040 + MIR SINE MIR 122 181 -81 211 133 0 0 chr20 2080636 2080666 -64587339 + L2 LINE L2 3222 3251 -21 585 273 134 34 chr20 2080674 2080967 -64587038 + L2 LINE L2 2782 3044 -269 2394 95 3 0 chr20 2080967 2081271 -64586734 - AluSp SINE Alu -8 305 1 585 273 134 34 chr20 2081271 2081472 -64586533 + L2 LINE L2 3044 3311 -2 1974 136 3 32 chr20 2081646 2081954 -64586051 + AluSx SINE Alu 1 299 -13 361 212 195 0 chr20 2082194 2082312 -64585693 + MIR SINE MIR 120 260 -2 1716 119 50 26 chr20 2082498 2082800 -64585205 + L1PA16 LINE L1 5849 6157 -9 1475 128 144 4 chr20 2082816 2083066 -64584939 + AluJb SINE Alu 1 285 -17 22 35 0 0 chr20 2083303 2083332 -64584673 + AT_rich Low_complexity Low_complexity 1 29 0 481 245 98 0 chr20 2083361 2083504 -64584501 - L1ME2 LINE L1 -114 6050 5894 1777 220 89 55 chr20 2083520 2084125 -64583880 - L1ME1 LINE L1 -5 6161 5536 291 346 55 0 chr20 2084139 2084266 -64583739 + L2 LINE L2 2912 3045 -268 737 112 16 48 chr20 2084266 2084391 -64583614 + MLT1B LTR MaLR 1 121 -269 4723 108 21 16 chr20 2084395 2085158 -64582847 + L1 LINE L1 3870 4636 -1510 1314 210 45 13 chr20 2085182 2085492 -64582513 + L1MC4 LINE L1 7165 7484 -558 1806 169 51 30 chr20 2085537 2085970 -64582035 + L1MC4 LINE L1 7470 7911 -131 246 105 18 73 chr20 2085971 2086036 -64581969 - L1M1 LINE L1 -603 5702 5641 231 250 70 23 chr20 2086070 2086198 -64581807 + L1MC4 LINE L1 7903 8036 -6 230 241 17 0 chr20 2086389 2086447 -64581558 - MIR SINE MIR -122 140 82 369 300 50 8 chr20 2086453 2086573 -64581432 + L2 LINE L2 3179 3303 -10 253 278 2 64 chr20 2086741 2086872 -64581133 - MIR SINE MIR -52 156 33 23 0 0 0 chr20 2088254 2088277 -64579728 + GC_rich Low_complexity Low_complexity 1 23 0 1855 156 0 13 chr20 2090158 2090460 -64577545 + AluJb SINE Alu 1 298 -14 317 282 100 53 chr20 2090775 2090945 -64577060 + MIR SINE MIR 2 179 -83 288 270 0 0 chr20 2091524 2091587 -64576418 - MIR3 SINE MIR -17 191 129 283 374 76 8 chr20 2092137 2092268 -64575737 - MIR3 SINE MIR -29 179 40 585 296 25 6 chr20 2093262 2093424 -64574581 - MIR SINE MIR -96 166 2 223 282 73 48 chr20 2093424 2093490 -64574515 + MIR SINE MIR 86 154 -108 2243 97 7 3 chr20 2093514 2093813 -64574192 + AluSx SINE Alu 1 300 -12 347 349 72 12 chr20 2094743 2094909 -64573096 - MIR SINE MIR -70 192 17 376 272 66 103 chr20 2094997 2095210 -64572795 - MIR SINE MIR -36 226 22 250 224 45 15 chr20 2096214 2096281 -64571724 + MIR SINE MIR 92 160 -102 229 267 151 20 chr20 2096523 2096669 -64571336 + MER104 DNA Tc2 4 168 -12 1680 161 20 26 chr20 2096700 2097005 -64571000 + AluJo SINE Alu 1 303 -9 264 278 180 41 chr20 2097824 2098018 -64569987 + MIR SINE MIR 23 243 -19 1347 225 44 16 chr20 2098202 2098518 -64569487 - ERVL LTR ERVL -3552 2212 1888 24 32 0 0 chr20 2098619 2098650 -64569355 + AT_rich Low_complexity Low_complexity 1 31 0 242 193 15 176 chr20 2099079 2099201 -64568804 - MIR3 SINE MIR -51 157 84 236 365 0 14 chr20 2099255 2099329 -64568676 - MIR SINE MIR -120 88 16 721 189 0 0 chr20 2099622 2099744 -64568261 + FRAM SINE Alu 38 159 -17 2109 133 0 29 chr20 2102717 2103032 -64564973 - AluSx SINE Alu -6 306 1 221 240 0 20 chr20 2103203 2103253 -64564752 - L2 LINE L2 -212 3060 3012 345 255 122 11 chr20 2103425 2103613 -64564392 - L1ME4a LINE L1 -237 5884 5676 2119 60 0 8 chr20 2103632 2103883 -64564122 + AluY SINE Alu 47 295 -16 1558 117 20 137 chr20 2103911 2104305 -64563700 + MER7A DNA MER2_type 1 346 0 213 379 11 11 chr20 2104307 2104394 -64563611 - L2 LINE L2 -50 3222 3136 190 285 278 7 chr20 2104551 2104702 -64563303 - L2 LINE L2 -265 3007 2816 1992 241 203 31 chr20 2105958 2107219 -64560786 - L2 LINE L2 0 3313 1791 426 216 60 0 chr20 2107219 2107335 -64560670 - Charlie1 DNA MER1_type 0 2761 2639 1968 138 7 7 chr20 2107337 2107634 -64560371 + AluSx SINE Alu 1 297 -15 436 298 21 7 chr20 2107835 2107976 -64560029 + MIR SINE MIR 50 192 -70 335 260 104 0 chr20 2109286 2109382 -64558623 - MIR SINE MIR -155 107 2 199 272 231 23 chr20 2110610 2110783 -64557222 - MIR SINE MIR -32 230 22 717 193 139 6 chr20 2113332 2113498 -64554507 + MER5A DNA MER1_type 1 188 -1 2069 96 59 0 chr20 2114139 2114410 -64553595 - AluSc SINE Alu -22 287 1 206 211 0 0 chr20 2114467 2114505 -64553500 - L2 LINE L2 -9 3263 3226 188 394 56 0 chr20 2114557 2114699 -64553306 + MIR SINE MIR 107 256 -6 331 321 88 51 chr20 2114838 2115112 -64552893 - L2 LINE L2 -19 3253 2970 404 293 160 26 chr20 2115160 2115467 -64552538 - L2 LINE L2 -625 2689 2342 2398 96 110 217 chr20 2116330 2116619 -64551386 - Tigger3(Golem) DNA MER2_type -3 3026 2708 804 153 0 8 chr20 2116619 2116743 -64551262 + FLAM_C SINE Alu 1 123 -20 2398 96 110 217 chr20 2116743 2117023 -64550982 - Tigger3(Golem) DNA MER2_type -321 2708 2433 638 211 75 14 chr20 2117023 2117170 -64550835 - FAM SINE Alu -19 156 1 2398 96 110 217 chr20 2117170 2117302 -64550703 - Tigger3(Golem) DNA MER2_type -596 2433 2289 226 353 0 12 chr20 2117378 2117463 -64550542 - MIR SINE MIR -91 117 34 390 270 70 0 chr20 2118062 2118162 -64549843 + MIR SINE MIR 30 136 -72 1320 92 0 0 chr20 2119401 2119565 -64548440 + AluSg/x SINE Alu 137 300 -12 253 241 69 35 chr20 2119628 2119715 -64548290 - L3 LINE CR1 -189 1388 1299 2496 79 0 0 chr20 2119896 2120199 -64547806 + AluSx SINE Alu 1 303 -9 1871 108 58 0 chr20 2120868 2121128 -64546877 + AluSx SINE Alu 1 275 -37 913 182 45 0 chr20 2121137 2121291 -64546714 + AluJb SINE Alu 132 292 -20 198 371 133 0 chr20 2121540 2121645 -64546360 + MIR SINE MIR 16 134 -74 288 298 91 8 chr20 2121680 2121801 -64546204 + MIR SINE MIR 5 135 -127 202 267 67 0 chr20 2122530 2122590 -64545415 - MIR SINE MIR -58 150 87 282 79 0 0 chr20 2123278 2123316 -64544689 + MIR SINE MIR 113 150 -112 372 320 145 5 chr20 2123655 2123855 -64544150 - MIR SINE MIR -15 247 20 1828 146 7 42 chr20 2124022 2124331 -64543674 + AluJo SINE Alu 1 298 -14 620 271 91 35 chr20 2124801 2125000 -64543005 + MIR SINE MIR 17 226 -36 239 274 73 81 chr20 2125276 2125400 -64542605 + MIR SINE MIR 21 141 -67 254 312 157 39 chr20 2127008 2127364 -64540641 - L1ME4a LINE L1 -195 5926 5529 1688 143 0 4 chr20 2127805 2128050 -64539955 + AluJo SINE Alu 45 288 -24 334 266 305 20 chr20 2128274 2128477 -64539528 - MIR SINE MIR 0 262 2 199 250 117 0 chr20 2128576 2128636 -64539369 + MIR SINE MIR 113 179 -83 473 225 101 14 chr20 2128798 2128936 -64539069 + MIR SINE MIR 33 182 -80 240 224 0 0 chr20 2129207 2129274 -64538731 + T-rich Low_complexity Low_complexity 1 67 0 222 322 33 41 chr20 2133999 2134120 -64533885 - MIR SINE MIR -116 146 27 238 269 228 18 chr20 2134606 2134777 -64533228 + MIR SINE MIR 38 244 -18 484 182 71 0 chr20 2135200 2135299 -64532706 - L1MB7 LINE L1 -43 6141 6036 24 32 0 0 chr20 2135711 2135742 -64532263 + AT_rich Low_complexity Low_complexity 1 31 0 406 219 41 96 chr20 2137750 2137896 -64530109 - FLAM_A SINE Alu -4 138 1 309 161 0 0 chr20 2137972 2138028 -64529977 - Charlie5 DNA MER1_type 0 2624 2569 321 286 0 51 chr20 2188233 2188331 -64479674 + MIR3 SINE MIR 113 205 -3 * 368 290 28 0 chr20 2188326 2188433 -64479572 + MIR3 SINE MIR 85 194 -14 2322 112 0 0 chr20 2188467 2188772 -64479233 - AluSx SINE Alu -7 305 1 521 301 107 5 chr20 2189630 2189836 -64478169 + MIR SINE MIR 1 227 -35 484 232 30 77 chr20 2190011 2190179 -64477826 - MIR SINE MIR -56 206 47 2358 107 0 0 chr20 2190421 2190731 -64477274 + AluSx SINE Alu 1 310 -2 428 267 44 84 chr20 2190830 2191126 -64476879 + L3 LINE CR1 1101 1384 -193 817 176 0 0 chr20 2191177 2191302 -64476703 - FLAM_C SINE Alu -18 125 1 265 232 63 53 chr20 2191328 2191423 -64476582 - L2 LINE L2 -52 3220 3125 2314 104 0 3 chr20 2191500 2191797 -64476208 + AluSq SINE Alu 3 298 -15 459 337 87 0 chr20 2192326 2192498 -64475507 - MIR3 SINE MIR -65 143 2 2202 106 20 3 chr20 2192625 2192918 -64475087 - AluSx SINE Alu -14 298 1 22 0 0 0 chr20 2192922 2192944 -64475061 + AT_rich Low_complexity Low_complexity 1 22 0 268 307 193 9 chr20 2192963 2193077 -64474928 - MIR SINE MIR -32 230 96 639 216 207 19 chr20 2193582 2193790 -64474215 + MIR SINE MIR 16 262 0 277 367 93 0 chr20 2193839 2193978 -64474027 - L2 LINE L2 0 3272 3121 276 278 146 28 chr20 2196333 2196477 -64471528 - MIR3 SINE MIR -25 183 23 272 318 159 8 chr20 2196541 2196667 -64471338 + MIR3 SINE MIR 47 191 -17 180 275 0 72 chr20 2196934 2197003 -64471002 + L2 LINE L2 3209 3272 0 187 295 95 32 chr20 2197005 2197100 -64470905 - L2 LINE L2 -19 3253 3153 587 276 43 0 chr20 2198267 2198430 -64469575 + MIR SINE MIR 1 170 -92 227 180 0 40 chr20 2198825 2198875 -64469130 + MIR SINE MIR 99 146 -62 280 183 0 50 chr20 2198981 2199041 -64468964 - MER5B DNA MER1_type -1 177 121 1971 156 6 34 chr20 2199041 2199361 -64468644 + AluSx SINE Alu 1 311 -1 602 136 0 30 chr20 2199383 2199515 -64468490 + (GAAA)n Simple_repeat Simple_repeat 1 128 0 336 295 80 18 chr20 2199515 2199627 -64468378 - MER5B DNA MER1_type -59 119 1 566 301 46 20 chr20 2199821 2200017 -64467988 + MIR SINE MIR 46 246 -16 271 312 0 64 chr20 2200140 2200249 -64467756 - MIR SINE MIR -74 188 87 203 244 67 84 chr20 2200555 2200674 -64467331 + MIR3 SINE MIR 44 160 -48 618 255 88 8 chr20 2200674 2200913 -64467092 - MER112 DNA MER1_type -1 259 2 2301 102 0 0 chr20 2200933 2201226 -64466779 - AluSx SINE Alu -19 293 1 598 231 60 82 chr20 2201620 2201902 -64466103 - MLT1J LTR MaLR -12 499 224 2388 148 30 70 chr20 2201948 2202243 -64465762 + L1MB5 LINE L1 5652 5917 -257 2350 96 3 6 chr20 2202243 2202555 -64465450 + AluSx SINE Alu 1 311 -1 2388 148 30 70 chr20 2202555 2202798 -64465207 + L1MB5 LINE L1 5917 6168 -6 220 209 99 55 chr20 2203113 2203204 -64464801 + MIR3 SINE MIR 89 183 -25 2772 203 96 41 chr20 2203890 2204650 -64463355 - MER21B LTR ERV1 -57 806 5 399 223 21 11 chr20 2204656 2204750 -64463255 + MIR SINE MIR 47 141 -121 421 346 86 7 chr20 2204932 2205147 -64462858 + MIR SINE MIR 18 248 -14 2280 134 0 6 chr20 2205688 2206002 -64462003 - AluSx SINE Alu 0 312 1 186 143 0 0 chr20 2206372 2206407 -64461598 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 213 245 0 0 chr20 2207064 2207113 -64460892 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 1933 158 0 3 chr20 2207165 2207468 -64460537 + AluJb SINE Alu 1 302 -10 2207 120 0 3 chr20 2208102 2208403 -64459602 - AluSq SINE Alu -12 301 2 252 383 33 0 chr20 2208522 2208642 -64459363 - L2 LINE L2 -245 3027 2904 379 314 39 13 chr20 2209128 2209284 -64458721 + MIR3 SINE MIR 22 181 -27 264 292 37 14 chr20 2209785 2209918 -64458087 + MIR SINE MIR 64 200 -62 417 333 71 7 chr20 2210472 2210613 -64457392 - L2 LINE L2 -1 3271 3122 592 258 48 48 chr20 2210971 2211223 -64456782 - L2 LINE L2 -166 3147 2896 2396 102 10 0 chr20 2211343 2211647 -64456358 + AluSx SINE Alu 1 307 -5 274 259 106 12 chr20 2211657 2211742 -64456263 - MIR3 SINE MIR -22 186 94 32 0 0 0 chr20 2211828 2211860 -64456145 + AT_rich Low_complexity Low_complexity 1 32 0 442 323 71 9 chr20 2212285 2212511 -64455494 - MIR SINE MIR -9 253 14 284 265 128 0 chr20 2212712 2212814 -64455191 - MIR3 SINE MIR -51 157 43 234 171 0 0 chr20 2212838 2212908 -64455097 + (CA)n Simple_repeat Simple_repeat 2 71 0 1695 168 0 59 chr20 2212974 2213122 -64454883 + AluJo SINE Alu 3 125 -187 1704 172 35 14 chr20 2213122 2213412 -64454593 + AluJb SINE Alu 4 299 -13 1695 168 0 59 chr20 2213412 2213567 -64454438 + AluJo SINE Alu 125 288 -24 1489 192 66 0 chr20 2213639 2213750 -64454255 + AluJo SINE Alu 4 106 -206 402 21 0 0 chr20 2213750 2213797 -64454208 + (CA)n Simple_repeat Simple_repeat 2 48 0 1489 192 66 0 chr20 2213797 2213956 -64454049 + AluJo SINE Alu 106 292 -20 212 294 44 0 chr20 2214841 2214909 -64453096 - MIR3 SINE MIR -26 182 112 275 209 42 49 chr20 2214985 2215091 -64452914 - MIR SINE MIR -73 135 42 523 246 67 58 chr20 2215095 2215319 -64452686 - L1MC5 LINE L1 -30 7931 7706 195 232 0 0 chr20 2215400 2215456 -64452549 + (TGAA)n Simple_repeat Simple_repeat 1 56 0 1827 144 62 0 chr20 2215523 2215815 -64452190 + AluSx SINE Alu 1 310 -2 36 0 0 0 chr20 2215815 2215851 -64452154 + AT_rich Low_complexity Low_complexity 1 36 0 293 0 0 26 chr20 2217148 2217186 -64450819 + (TA)n Simple_repeat Simple_repeat 1 37 0 2250 113 3 0 chr20 2217252 2217544 -64450461 - AluSq SINE Alu -20 293 1 181 250 0 0 chr20 2218733 2218765 -64449240 - MIR SINE MIR -139 69 38 554 257 56 50 chr20 2219026 2219205 -64448800 + MIR3 SINE MIR 22 201 -7 543 190 141 68 chr20 2219515 2219678 -64448327 - MIR SINE MIR -6 256 82 210 383 25 0 chr20 2219704 2219785 -64448220 + MIR3 SINE MIR 84 166 -42 222 313 26 61 chr20 2220617 2220732 -64447273 - L2 LINE L2 -210 3062 2952 25 0 0 0 chr20 2221404 2221429 -64446576 + AT_rich Low_complexity Low_complexity 1 25 0 360 169 8 89 chr20 2221634 2221758 -64446247 - L1ME4a LINE L1 -222 5899 5786 737 206 24 12 chr20 2221826 2221991 -64446014 + MIR SINE MIR 39 205 -57 1592 246 65 56 chr20 2222295 2223156 -64444849 - L1PB1 LINE L1 -1 6150 5282 1817 263 133 25 chr20 2223274 2224185 -64443820 - L1ME LINE L1 -5056 1014 6 513 317 112 18 chr20 2224756 2224980 -64443025 + MIR SINE MIR 9 253 -9 212 180 45 112 chr20 2225015 2225104 -64442901 + MIR SINE MIR 69 151 -57 1932 143 7 7 chr20 2225792 2226085 -64441920 + AluSx SINE Alu 1 293 -19 511 181 66 163 chr20 2226250 2226414 -64441591 - MER112 DNA MER1_type 0 260 133 2284 59 0 24 chr20 2226414 2226725 -64441280 + AluY SINE Alu 1 304 0 511 181 66 163 chr20 2226725 2226847 -64441158 - MER112 DNA MER1_type -127 133 1 189 0 0 0 chr20 2226849 2226870 -64441135 + (TCTA)n Simple_repeat Simple_repeat 1 21 0 396 315 103 5 chr20 2228145 2228329 -64439676 - MARNA DNA Mariner -84 502 301 260 318 11 11 chr20 2228711 2228799 -64439206 - L2 LINE L2 -1 3271 3184 565 315 104 14 chr20 2228859 2229081 -64438924 + MIR SINE MIR 8 249 -13 182 299 86 81 chr20 2229709 2229883 -64438122 + MIR3 SINE MIR 2 176 -32 2324 110 0 22 chr20 2229949 2230268 -64437737 + AluSx SINE Alu 1 312 0 317 270 53 112 chr20 2231873 2232025 -64435980 - MIR SINE MIR -65 143 1 1847 130 41 54 chr20 2232605 2232921 -64435084 - AluJo SINE Alu 0 312 1 239 309 111 25 chr20 2232987 2233149 -64434856 + MIR3 SINE MIR 4 179 -29 982 106 8 0 chr20 2233888 2234020 -64433985 + FLAM_C SINE Alu 1 133 -10 257 323 219 0 chr20 2235036 2235191 -64432814 - MIR3 SINE MIR 0 208 20 282 338 58 19 chr20 2235964 2236118 -64431887 + MIR SINE MIR 13 172 -90 * 447 309 72 30 chr20 2236115 2236351 -64431654 + L2 LINE L2 3024 3269 -44 2317 85 7 3 chr20 2236662 2236957 -64431048 + AluSx SINE Alu 1 296 -16 215 269 51 13 chr20 2237828 2237906 -64430099 + MIR SINE MIR 63 143 -119 263 223 146 29 chr20 2238066 2238169 -64429836 - MIR3 SINE MIR -27 181 67 206 351 36 0 chr20 2238316 2238427 -64429578 + L3 LINE CR1 1084 1198 -379 880 165 0 0 chr20 2238580 2238707 -64429298 + FLAM_C SINE Alu 1 127 -16 420 212 278 10 chr20 2240375 2240573 -64427432 + L3 LINE CR1 1212 1462 -115 649 165 0 19 chr20 2241199 2241302 -64426703 + FRAM SINE Alu 60 160 -16 2444 282 35 27 chr20 2241387 2242156 -64425849 + HERV16 LTR ERVL 555 1329 -3667 1795 233 66 11 chr20 2242156 2242351 -64425654 + L1MEc LINE L1 1866 2049 -4166 1997 166 3 6 chr20 2242351 2242664 -64425341 + AluSx SINE Alu 1 312 0 2142 143 0 0 chr20 2242667 2242974 -64425031 + AluSx SINE Alu 1 307 -5 1795 233 66 11 chr20 2242974 2243430 -64424575 + L1MEc LINE L1 2050 2518 -3697 1812 223 82 41 chr20 2243436 2243724 -64424281 + L1MEc LINE L1 2854 3129 -3086 2239 111 3 0 chr20 2243724 2244031 -64423974 + AluSp SINE Alu 1 308 -5 1812 223 82 41 chr20 2244031 2244303 -64423702 + L1MEc LINE L1 3129 3449 -2766 1808 160 48 0 chr20 2244303 2244597 -64423408 + AluJb SINE Alu 1 308 -4 1812 223 82 41 chr20 2244597 2244720 -64423285 + L1MEc LINE L1 3449 3566 -2649 289 247 215 0 chr20 2244727 2244820 -64423185 + MLT1H LTR MaLR 421 533 -16 204 330 26 110 chr20 2244870 2245143 -64422862 + L2 LINE L2 2998 3247 -25 753 230 82 4 chr20 2245217 2245446 -64422559 - MIR SINE MIR -2 260 16 194 247 86 12 chr20 2245822 2245903 -64422102 - MIR SINE MIR -65 197 111 1275 95 0 0 chr20 2246664 2246832 -64421173 - AluY SINE Alu -13 298 131 924 254 194 12 chr20 2247135 2247770 -64420235 - L2 LINE L2 -124 3189 2432 1297 270 137 35 chr20 2248294 2248490 -64419515 + MLT1G1 LTR MaLR 1 176 -419 531 0 0 0 chr20 2248490 2248549 -64419456 + (TC)n Simple_repeat Simple_repeat 1 59 0 1297 270 137 35 chr20 2248549 2248892 -64419113 + MLT1G1 LTR MaLR 176 595 0 333 278 156 23 chr20 2249313 2249486 -64418519 - L2 LINE L2 0 3313 3118 353 336 39 0 chr20 2249855 2249983 -64418022 - LTR67 LTR ERVL -315 242 110 267 275 34 98 chr20 2249990 2250226 -64417779 + MLT1J LTR MaLR 267 487 -24 270 284 0 14 chr20 2250339 2250413 -64417592 - MER5A DNA MER1_type -6 183 111 216 239 14 42 chr20 2250358 2250429 -64417576 + MER5A DNA MER1_type 37 105 -84 * 941 217 39 5 chr20 2250657 2250860 -64417145 + MIR SINE MIR 39 248 -14 992 0 0 9 chr20 2251314 2251427 -64416578 + AluY SINE Alu 198 309 -2 2229 106 3 26 chr20 2251816 2252127 -64415878 + AluSx SINE Alu 5 308 -4 465 225 1 25 chr20 2252246 2252380 -64415625 + L1MC5 LINE L1 7808 8042 0 2801 251 98 29 chr20 2252433 2254325 -64413680 + L1M4 LINE L1 48 2151 -4495 * 2971 180 82 15 chr20 2254315 2255103 -64412902 + L1MB3 LINE L1 4724 5593 -590 1525 134 14 28 chr20 2255107 2255390 -64412615 + L1MB3 LINE L1 5904 6182 -1 871 275 36 18 chr20 2255422 2255808 -64412197 + L1M4 LINE L1 2265 2657 -3989 802 286 97 19 chr20 2256218 2256589 -64411416 + LTR16C LTR ERVL 92 491 0 377 310 179 14 chr20 2256764 2257116 -64410889 - L2 LINE L2 -765 2549 2140 534 144 29 93 chr20 2257860 2257922 -64410083 - L1ME3 LINE L1 -3 6159 6095 6514 98 23 2 chr20 2257922 2259539 -64408466 - L1PA15 LINE L1 0 6165 4528 534 144 29 93 chr20 2259539 2259615 -64408390 - L1ME3 LINE L1 -67 6095 6030 1492 177 0 4 chr20 2259647 2259918 -64408087 - L1MB3 LINE L1 -2 6181 5912 10269 157 71 8 chr20 2259920 2261909 -64406096 - L1M4c LINE L1 -4173 2211 2 1742 167 13 23 chr20 2262104 2262404 -64405601 - AluJo SINE Alu -15 297 1 657 279 61 39 chr20 2262519 2262799 -64405206 - MER115 DNA AcHobo -1 692 407 1150 227 52 0 chr20 2262831 2263082 -64404923 + L1MDb LINE L1 8 271 -6138 207 0 0 0 chr20 2263119 2263142 -64404863 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1726 214 43 0 chr20 2263160 2263534 -64404471 - L1MD1 LINE L1 -359 5883 5494 2506 176 28 35 chr20 2263534 2263763 -64404242 + L1MD2 LINE L1 5819 6048 -311 2443 84 0 0 chr20 2263763 2264062 -64403943 + AluY SINE Alu 1 299 -12 2506 176 28 35 chr20 2264062 2264377 -64403628 + L1MD2 LINE L1 6048 6359 0 718 326 48 22 chr20 2264377 2264650 -64403355 - MER115 DNA AcHobo -324 369 90 1205 232 103 49 chr20 2264779 2264807 -64403198 + MLT1E3 LTR MaLR 4 29 -595 1574 211 133 42 chr20 2264807 2265240 -64402765 + MLT2B1 LTR ERVL 3 484 -36 234 0 0 0 chr20 2265240 2265266 -64402739 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 1574 211 133 42 chr20 2265266 2265307 -64402698 + MLT2B1 LTR ERVL 484 520 0 1205 232 103 49 chr20 2265307 2265812 -64402193 + MLT1E3 LTR MaLR 29 573 -51 2179 100 28 3 chr20 2266024 2266313 -64401692 + AluSq SINE Alu 1 296 -17 2315 192 50 52 chr20 2266496 2267079 -64400926 - L1MB5 LINE L1 -7 6167 5586 278 174 0 0 chr20 2267092 2267138 -64400867 + MLT1E3 LTR MaLR 560 605 -19 4414 236 56 119 chr20 2267153 2268899 -64399106 - HAL1 LINE L1 -128 2379 827 1644 183 20 7 chr20 2268899 2269205 -64398800 + AluJo SINE Alu 1 310 -2 4414 236 56 119 chr20 2269205 2269871 -64398134 - HAL1 LINE L1 -1680 827 120 448 313 5 21 chr20 2270722 2270940 -64397065 + MIR SINE MIR 7 254 -8 308 355 6 6 chr20 2271804 2271970 -64396035 - LTR67 LTR ERVL -356 201 36 846 152 0 8 chr20 2271981 2272113 -64395892 + FLAM_A SINE Alu 1 131 -2 327 248 35 106 chr20 2272182 2272408 -64395597 - L1MC4 LINE L1 -1 8041 7832 833 195 40 40 chr20 2272460 2272660 -64395345 - L1ME2 LINE L1 -19 6145 5946 1330 179 0 41 chr20 2272843 2273089 -64394916 + AluJo SINE Alu 1 236 -76 186 208 0 4 chr20 2273998 2274052 -64393953 - MIR SINE MIR -65 143 100 1794 156 17 61 chr20 2274446 2274856 -64393149 - Charlie1b DNA MER1_type 0 523 132 30 27 0 0 chr20 2274986 2275023 -64392982 + AT_rich Low_complexity Low_complexity 1 37 0 1952 107 52 21 chr20 2275025 2275314 -64392691 + AluSx SINE Alu 1 298 -14 940 212 78 0 chr20 2275876 2276093 -64391912 - MIR SINE MIR 0 262 29 2311 104 0 0 chr20 2276387 2276685 -64391320 + AluSq SINE Alu 1 298 -15 709 155 39 16 chr20 2276855 2276984 -64391021 - FLAM_A SINE Alu -1 132 1 26 0 0 0 chr20 2276987 2277013 -64390992 + AT_rich Low_complexity Low_complexity 1 26 0 566 264 87 42 chr20 2277106 2277371 -64390634 - L1MC4a LINE L1 -1911 5897 5621 1977 103 11 29 chr20 2277594 2277875 -64390130 + AluY SINE Alu 23 298 -13 532 202 118 22 chr20 2278187 2278365 -64389640 - MIR3 SINE MIR -2 206 12 2129 112 10 10 chr20 2278373 2278667 -64389338 + AluSx SINE Alu 1 294 -18 335 333 18 0 chr20 2279346 2279460 -64388545 - MIR3 SINE MIR -7 201 86 369 274 9 0 chr20 2280678 2280791 -64387214 + MIR SINE MIR 79 192 -70 1890 158 0 3 chr20 2280860 2281157 -64386848 + AluJb SINE Alu 1 296 -16 445 274 68 7 chr20 2282005 2282151 -64385854 - MER117 DNA MER1_type -37 160 6 194 208 0 21 chr20 2282811 2282859 -64385146 + MIR SINE MIR 87 133 -75 2481 76 0 0 chr20 2283051 2283353 -64384652 + AluY SINE Alu 1 302 -9 308 296 10 0 chr20 2283424 2283522 -64384483 - MER94 DNA DNA -35 99 1 247 293 154 8 chr20 2283530 2283653 -64384352 - MIR SINE MIR -64 198 58 501 321 80 13 chr20 2283711 2283948 -64384057 - MIR SINE MIR -1 261 9 181 118 59 0 chr20 2284711 2284745 -64383260 - MIR SINE MIR -64 144 109 501 319 32 0 chr20 2285030 2285187 -64382818 - L2 LINE L2 0 3272 3111 235 323 164 35 chr20 2285692 2285918 -64382087 + L3 LINE CR1 1294 1548 -29 183 230 79 119 chr20 2286277 2286403 -64381602 + MIR3 SINE MIR 84 204 -4 2173 224 111 9 chr20 2286913 2287453 -64380552 - MLT1G1 LTR MaLR 0 595 1 542 262 30 69 chr20 2287676 2287715 -64380290 + MIR SINE MIR 56 95 -167 798 164 0 15 chr20 2287715 2287849 -64380156 + FLAM_C SINE Alu 1 132 -1 542 262 30 69 chr20 2287849 2288011 -64379994 + MIR SINE MIR 95 249 -13 1805 246 30 39 chr20 2288149 2288747 -64379258 + MLT1F LTR MaLR 1 542 0 557 232 82 10 chr20 2288781 2288988 -64379017 - MER20B DNA MER1_type -38 745 524 * 1909 235 17 34 chr20 2288979 2289455 -64378550 + MER90 LTR ERV1 147 614 0 282 214 61 51 chr20 2289457 2289555 -64378450 - MER112 DNA MER1_type -106 154 56 293 239 110 9 chr20 2289628 2289737 -64378268 + MIR SINE MIR 13 132 -130 1335 258 79 22 chr20 2289743 2290375 -64377630 - L2 LINE L2 0 3313 2642 254 379 16 0 chr20 2290917 2291041 -64376964 + L2 LINE L2 2662 2787 -527 310 339 0 35 chr20 2291345 2291460 -64376545 + L2 LINE L2 3166 3276 -37 442 306 129 4 chr20 2291719 2291856 -64376149 - MIR SINE MIR -1 261 142 1684 165 39 4 chr20 2291856 2292135 -64375870 + AluJb SINE Alu 1 289 -23 442 306 129 4 chr20 2292135 2292229 -64375776 - MIR SINE MIR -119 143 1 2585 226 30 41 chr20 2292306 2292763 -64375242 - MER82 DNA MER2_type 0 653 203 1709 112 35 18 chr20 2292763 2293048 -64374957 - AluSx SINE Alu -18 294 5 2585 226 30 41 chr20 2293048 2293228 -64374777 - MER82 DNA MER2_type -450 203 23 1757 146 0 14 chr20 2293233 2293545 -64374460 + AluSx SINE Alu 1 308 0 508 254 164 0 chr20 2294886 2295051 -64372954 + MIR SINE MIR 14 205 -57 2303 91 3 0 chr20 2295124 2295431 -64372574 + AluSp SINE Alu 1 308 -5 944 165 74 0 chr20 2296108 2296284 -64371721 - MER5A DNA MER1_type 0 189 1 684 251 25 6 chr20 2296711 2296874 -64371131 - Charlie8 DNA MER1_type -2241 176 11 199 214 36 0 chr20 2296884 2296940 -64371065 - L2 LINE L2 -541 2773 2716 1045 219 41 156 chr20 2297364 2297993 -64370012 - MLT1G LTR MaLR 0 590 34 451 286 70 75 chr20 2298278 2298491 -64369514 + MIR SINE MIR 47 258 -4 285 276 81 8 chr20 2299155 2299278 -64368727 + MIR3 SINE MIR 51 182 -26 1673 128 3 106 chr20 2300117 2300446 -64367559 + AluSx SINE Alu 1 295 -7 944 260 22 5 chr20 2300775 2300998 -64367007 - MIR SINE MIR 0 262 36 461 222 21 56 chr20 2300998 2301142 -64366863 - L1MC/D LINE L1 -2012 5796 5658 1986 123 13 25 chr20 2301181 2301497 -64366508 + AluSx SINE Alu 1 312 0 231 336 44 9 chr20 2301868 2301981 -64366024 + MIR3 SINE MIR 38 154 -54 577 333 132 26 chr20 2302030 2302378 -64365627 + L2 LINE L2 2848 3232 -81 189 213 0 0 chr20 2302408 2302455 -64365550 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 229 274 43 60 chr20 2303281 2303398 -64364607 - MIR SINE MIR 0 262 148 2223 110 0 0 chr20 2303867 2304166 -64363839 - AluSq SINE Alu -14 299 1 892 234 173 19 chr20 2304216 2304587 -64363418 - MLT1H LTR MaLR -53 502 1 477 252 17 17 chr20 2304592 2304707 -64363298 + MER5B DNA MER1_type 64 178 0 1274 163 0 9 chr20 2305518 2305733 -64362272 + AluJb SINE Alu 85 297 -15 2196 88 16 0 chr20 2305779 2306087 -64361918 + AluSq SINE Alu 1 313 0 374 291 104 68 chr20 2306137 2306388 -64361617 - MIR SINE MIR -1 261 2 557 304 113 0 chr20 2306493 2306562 -64361443 - MIR SINE MIR -34 228 168 1916 137 17 0 chr20 2306562 2306855 -64361150 + AluSx SINE Alu 1 298 -14 557 304 113 0 chr20 2306855 2306989 -64361016 - MIR SINE MIR -94 168 2 222 255 121 64 chr20 2307188 2307329 -64360676 - L2 LINE L2 -175 3097 2949 596 281 78 45 chr20 2307520 2307825 -64360180 + L2 LINE L2 2907 3313 0 505 253 129 39 chr20 2307972 2308150 -64359855 - L2 LINE L2 -18 3295 3102 2317 225 47 19 chr20 2308191 2308655 -64359350 + L1MB8 LINE L1 2625 3117 -3029 2082 120 7 10 chr20 2308655 2308964 -64359041 + AluSx SINE Alu 1 308 -4 2317 225 47 19 chr20 2308964 2309197 -64358808 + L1MB8 LINE L1 3117 3342 -2804 2862 217 68 42 chr20 2309219 2309909 -64358096 + MER21B LTR ERV1 20 732 -131 192 77 0 0 chr20 2309909 2309935 -64358070 + (AATTG)n Simple_repeat Simple_repeat 1 26 0 2862 217 68 42 chr20 2309935 2309999 -64358006 + MER21B LTR ERV1 732 793 -70 3054 210 14 64 chr20 2310029 2310900 -64357105 + L1MB8 LINE L1 3340 4166 -1980 940 222 25 21 chr20 2310868 2311107 -64356898 + L1MB3 LINE L1 4870 5109 -1037 * 926 117 0 0 chr20 2311102 2311239 -64356766 + L1MB3 LINE L1 5592 5728 -455 * 234 143 0 0 chr20 2311241 2311276 -64356729 + 5S rRNA rRNA 2 36 -85 2766 126 20 11 chr20 2311277 2311736 -64356269 + L1MB3 LINE L1 5714 6176 -7 4350 187 22 75 chr20 2311822 2312354 -64355651 + L1MB8 LINE L1 4206 4645 -1501 1374 191 33 26 chr20 2312354 2312658 -64355347 + AluJb SINE Alu 1 306 -6 4350 187 22 75 chr20 2312658 2313290 -64354715 + L1MB8 LINE L1 4645 5309 -837 673 170 0 0 chr20 2313342 2313454 -64354551 + FLAM_C SINE Alu 28 139 -4 4489 150 41 18 chr20 2313455 2314306 -64353699 + L1MB8 LINE L1 5308 6178 0 239 175 0 0 chr20 2314306 2314346 -64353659 - L2 LINE L2 -250 3063 3024 200 212 0 0 chr20 2314699 2314732 -64353273 - MIR SINE MIR -113 149 117 428 317 170 7 chr20 2314800 2315100 -64352905 - L2 LINE L2 -718 2596 2248 353 293 83 32 chr20 2315120 2315277 -64352728 - MER102b DNA MER1_type 0 341 177 * 1037 162 24 0 chr20 2315270 2315437 -64352568 - MER66A LTR ERV1 -30 448 278 251 173 0 19 chr20 2315427 2315479 -64352526 + Alu SINE Alu 252 302 0 * 921 223 5 27 chr20 2315483 2315703 -64352302 + L1M4 LINE L1 4741 4955 -1191 1454 187 74 0 chr20 2315714 2315971 -64352034 - MER66A LTR ERV1 -202 276 1 613 232 127 72 chr20 2315993 2316230 -64351775 + MIR SINE MIR 13 262 0 358 250 148 39 chr20 2316258 2316386 -64351619 - MER102b DNA MER1_type -190 151 10 242 192 0 0 chr20 2316944 2316990 -64351015 - MIR SINE MIR -66 142 105 366 225 79 0 chr20 2317105 2317194 -64350811 + MER46C DNA MER2_type 220 315 -23 1836 124 40 13 chr20 2317226 2317524 -64350481 - AluSg SINE Alu -4 306 1 591 325 48 9 chr20 2317528 2317756 -64350249 - MIR SINE MIR -11 251 15 1686 81 0 9 chr20 2318020 2318241 -64349764 + AluSc SINE Alu 1 219 -90 253 222 8 8 chr20 2318359 2318485 -64349520 + CT-rich Low_complexity Low_complexity 1 126 0 573 247 230 37 chr20 2318717 2319065 -64348940 - L1ME4a LINE L1 -1 6120 5706 2275 69 0 7 chr20 2319188 2319492 -64348513 + AluY SINE Alu 1 302 -9 9095 187 30 46 chr20 2319534 2320205 -64347800 - L1MC2 LINE L1 -2 6342 5661 2259 105 0 0 chr20 2320205 2320510 -64347495 - AluSc SINE Alu -4 305 1 9095 187 30 46 chr20 2320510 2321075 -64346930 - L1MC2 LINE L1 -683 5661 5088 2180 100 0 0 chr20 2321075 2321364 -64346641 + AluSx SINE Alu 1 289 -23 9095 187 30 46 chr20 2321364 2321652 -64346353 - L1MC2 LINE L1 -1256 5088 4797 14543 115 37 54 chr20 2321652 2321874 -64346131 - Tigger1 DNA MER2_type -1 2417 2193 1729 138 6 66 chr20 2321874 2322192 -64345813 + AluJb SINE Alu 1 299 -13 14543 115 37 54 chr20 2322192 2324277 -64343728 - Tigger1 DNA MER2_type -225 2193 153 1602 159 3 51 chr20 2324277 2324591 -64343414 + AluJo SINE Alu 1 299 -13 14543 115 37 54 chr20 2324591 2324742 -64343263 - Tigger1 DNA MER2_type -2265 153 1 9095 187 30 46 chr20 2324742 2324947 -64343058 - L1MC2 LINE L1 -1547 4797 4590 1345 161 48 20 chr20 2324947 2325239 -64342766 - L1MA4 LINE L1 -6 6294 5995 9095 187 30 46 chr20 2325239 2326961 -64341044 - L1MC2 LINE L1 -1754 4590 2954 988 161 0 0 chr20 2326972 2327133 -64340872 - AluJb SINE Alu -3 309 149 1327 245 3 3 chr20 2327133 2327468 -64340537 - L1MC2 LINE L1 -3174 2972 2638 564 125 0 0 chr20 2327688 2327768 -64340237 - MER5A DNA MER1_type -105 84 5 225 365 0 0 chr20 2327782 2327867 -64340138 + MIR SINE MIR 176 260 -2 22 70 0 0 chr20 2327876 2327919 -64340086 + AT_rich Low_complexity Low_complexity 1 43 0 370 271 74 0 chr20 2327921 2328043 -64339962 + MIR SINE MIR 131 261 -1 2014 94 11 14 chr20 2328044 2328350 -64339655 - AluSx SINE Alu 0 305 1 2228 93 0 0 chr20 2328716 2329007 -64338998 + AluSc SINE Alu 3 293 -16 216 103 0 0 chr20 2329277 2329306 -64338699 + L2 LINE L2 3267 3295 -18 287 286 57 9 chr20 2329464 2329569 -64338436 + MIR SINE MIR 74 183 -79 580 159 12 29 chr20 2330392 2330562 -64337443 + (TTCA)n Simple_repeat Simple_repeat 2 168 0 385 229 7 13 chr20 2330578 2330731 -64337274 + (TTCA)n Simple_repeat Simple_repeat 1 152 0 239 331 63 14 chr20 2330896 2331038 -64336967 - L2 LINE L2 -173 3099 2951 245 325 244 5 chr20 2331050 2331247 -64336758 - L2 LINE L2 -198 3074 2831 2082 121 3 6 chr20 2331260 2331573 -64336432 - AluSx SINE Alu 0 312 1 516 258 30 0 chr20 2331941 2332073 -64335932 + MIR3 SINE MIR 34 169 -39 5388 129 19 45 chr20 2332602 2332933 -64335072 + HSMAR2 DNA Mariner 421 759 -543 2112 103 17 0 chr20 2332933 2333225 -64334780 + AluSx SINE Alu 1 297 -15 5388 129 19 45 chr20 2333225 2333539 -64334466 + HSMAR2 DNA Mariner 759 1038 -264 2226 103 0 0 chr20 2333539 2333840 -64334165 - AluSx SINE Alu -11 301 1 5388 129 19 45 chr20 2333840 2334099 -64333906 + HSMAR2 DNA Mariner 1038 1302 0 1251 206 5 0 chr20 2334676 2334895 -64333110 - MER58A DNA MER1_type 0 224 5 1307 279 58 7 chr20 2335870 2336297 -64331708 - LTR16A LTR ERVL 0 450 2 1838 141 0 11 chr20 2336565 2336746 -64331259 - AluSx SINE Alu 0 314 136 225 0 0 0 chr20 2336746 2336771 -64331234 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1838 141 0 11 chr20 2336771 2336906 -64331099 - AluSx SINE Alu -178 136 1 331 307 7 88 chr20 2336915 2336993 -64331012 - L2 LINE L2 -241 3072 3008 679 261 58 43 chr20 2336993 2337250 -64330755 - MIR SINE MIR 0 262 2 331 307 7 88 chr20 2337250 2337308 -64330697 - L2 LINE L2 -305 3008 2947 1621 250 108 43 chr20 2337629 2337697 -64330308 - MLT1G1 LTR MaLR 0 595 533 2235 98 3 0 chr20 2337697 2338003 -64330002 + AluSp SINE Alu 1 307 -6 1621 250 108 43 chr20 2338003 2338491 -64329514 - MLT1G1 LTR MaLR -62 533 3 186 344 16 0 chr20 2338674 2338738 -64329267 - L2 LINE L2 -379 2935 2871 1891 212 32 63 chr20 2339014 2339551 -64328454 - MLT2B1 LTR ERVL 0 520 1 186 152 30 0 chr20 2339681 2339714 -64328291 - L2 LINE L2 -11 3302 3269 * 633 252 19 7 chr20 2339711 2339866 -64328139 - MIR SINE MIR -92 170 14 2030 132 0 6 chr20 2340524 2340835 -64327170 - AluSx SINE Alu -3 309 1 1829 262 119 11 chr20 2340882 2341679 -64326326 + L1M4 LINE L1 4070 4952 -1194 2040 110 17 0 chr20 2341684 2341983 -64326022 + AluSx SINE Alu 1 304 -8 1049 208 4 79 chr20 2342002 2342281 -64325724 + LTR47A LTR ERVL 1 258 -194 262 189 0 34 chr20 2342283 2342342 -64325663 + LTR47B LTR ERVL 200 258 -185 262 189 0 34 chr20 2342344 2342403 -64325602 + LTR47B LTR ERVL 200 258 -185 262 189 0 34 chr20 2342405 2342464 -64325541 + LTR47B LTR ERVL 200 258 -185 259 271 0 0 chr20 2342466 2342525 -64325480 + LTR47A LTR ERVL 200 258 -194 262 189 0 34 chr20 2342527 2342586 -64325419 + LTR47B LTR ERVL 200 258 -185 247 189 0 34 chr20 2342588 2342647 -64325358 + LTR47B LTR ERVL 200 258 -185 262 189 0 34 chr20 2342649 2342708 -64325297 + LTR47B LTR ERVL 200 258 -185 247 189 0 34 chr20 2342710 2342769 -64325236 + LTR47B LTR ERVL 200 258 -185 232 171 0 0 chr20 2342795 2342830 -64325175 + LTR47A LTR ERVL 224 258 -194 262 189 0 34 chr20 2342832 2342891 -64325114 + LTR47B LTR ERVL 200 258 -185 247 189 0 34 chr20 2342893 2342952 -64325053 + LTR47B LTR ERVL 200 258 -185 262 189 0 34 chr20 2342954 2343013 -64324992 + LTR47B LTR ERVL 200 258 -185 262 189 0 34 chr20 2343015 2343074 -64324931 + LTR47B LTR ERVL 200 258 -185 1301 203 0 8 chr20 2343084 2343320 -64324685 + LTR47B LTR ERVL 210 443 0 247 179 0 0 chr20 2343321 2343360 -64324645 + LTR47B LTR ERVL 405 443 0 586 273 42 24 chr20 2343360 2343693 -64324312 + L1M4 LINE L1 4962 5300 -846 2263 142 78 0 chr20 2343717 2344091 -64323914 - MER101 LTR ERV1 0 474 72 873 107 0 137 chr20 2344091 2344318 -64323687 - AluSg/x SINE Alu 0 341 138 5173 201 58 61 chr20 2344362 2344559 -64323446 + L1MD1 LINE L1 5 201 -6341 1831 172 7 0 chr20 2344559 2344867 -64323138 - AluJb SINE Alu -2 310 1 5173 201 58 61 chr20 2344867 2346104 -64321901 + L1MD1 LINE L1 201 1434 -5108 1066 176 80 73 chr20 2346156 2346503 -64321502 + MER66A LTR ERV1 97 339 -139 2303 79 7 0 chr20 2346526 2346816 -64321189 + AluSp SINE Alu 1 292 -21 1823 214 83 41 chr20 2346820 2346907 -64321098 + L1MD1 LINE L1 3577 3659 -2985 2005 152 0 13 chr20 2346907 2347223 -64320782 + AluSx SINE Alu 1 312 0 1823 214 83 41 chr20 2347223 2347776 -64320229 + L1MD1 LINE L1 3659 4244 -2400 399 129 212 0 chr20 2347776 2347861 -64320144 + MER21-int LTR ERV1 3858 3960 -231 4781 154 25 48 chr20 2347861 2347890 -64320115 + L1MD1 LINE L1 5789 5817 -923 1570 115 196 8 chr20 2347890 2348150 -64319855 + AluSg1 SINE Alu 1 309 0 4781 154 25 48 chr20 2348150 2349095 -64318910 + L1MD1 LINE L1 5817 6740 0 873 150 0 0 chr20 2349102 2349229 -64318776 + FLAM_C SINE Alu 1 127 -6 386 191 43 11 chr20 2349271 2349365 -64318640 - L1M4 LINE L1 -3386 3571 3475 1054 219 36 33 chr20 2349396 2349510 -64318495 - L1M4 LINE L1 -5341 1518 1406 270 81 0 0 chr20 2349510 2349547 -64318458 + (TG)n Simple_repeat Simple_repeat 1 37 0 212 0 36 0 chr20 2349546 2349574 -64318431 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 1054 219 36 33 chr20 2349547 2349765 -64318240 - L1M4 LINE L1 -5453 1406 1212 1029 285 88 25 chr20 2349960 2350472 -64317533 + L2 LINE L2 2335 2878 -436 1657 230 120 56 chr20 2350478 2350585 -64317420 - LTR41 LTR ERVL 0 795 696 2283 189 17 13 chr20 2350585 2351044 -64316961 - MER65C LTR ERV1 0 461 1 1657 230 120 56 chr20 2351044 2351664 -64316341 - LTR41 LTR ERVL -99 696 3 891 272 59 49 chr20 2351667 2352093 -64315912 + L2 LINE L2 2884 3313 0 207 171 0 0 chr20 2352214 2352237 -64315768 + T-rich Low_complexity Low_complexity 1 26 -15 626 132 47 0 chr20 2352237 2352343 -64315662 - HY1 scRNA scRNA -1 111 1 207 171 0 0 chr20 2352343 2352360 -64315645 + T-rich Low_complexity Low_complexity 25 41 0 2119 221 77 22 chr20 2352362 2352909 -64315096 - L1ME3A LINE L1 0 6170 5594 539 120 102 0 chr20 2353015 2353123 -64314882 + LTR52 LTR ERVL 236 354 -67 227 209 0 0 chr20 2353196 2353239 -64314766 - MIR SINE MIR -115 147 105 279 0 0 0 chr20 2353243 2353274 -64314731 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 193 105 0 53 chr20 2353296 2353334 -64314671 - L2 LINE L2 -71 3242 3207 297 303 113 30 chr20 2353349 2353580 -64314425 + L1MC/D LINE L1 5344 5593 -2215 2064 108 27 17 chr20 2353591 2353887 -64314118 - AluSx SINE Alu -13 299 1 189 0 0 0 chr20 2354268 2354289 -64313716 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2008 46 4 4 chr20 2354302 2354542 -64313463 - AluSp SINE Alu -73 240 1 249 116 5 68 chr20 2354990 2355049 -64312956 + Alu SINE Alu 253 302 0 361 156 55 18 chr20 2355056 2355165 -64312840 + GA-rich Low_complexity Low_complexity 2 114 0 1124 117 0 19 chr20 2355206 2355368 -64312637 + AluJo SINE Alu 133 291 -21 2096 93 18 7 chr20 2355964 2356244 -64311761 - AluSx SINE Alu -19 293 11 2003 125 66 0 chr20 2356742 2357031 -64310974 + AluSx SINE Alu 1 308 -4 1738 197 92 28 chr20 2357311 2357669 -64310336 - L1MB5 LINE L1 0 6174 5778 1841 148 99 69 chr20 2357669 2358101 -64309904 + MER65A LTR ERV1 1 445 0 1738 197 92 28 chr20 2358101 2358210 -64309795 - L1MB5 LINE L1 -396 5778 5677 351 176 118 0 chr20 2358215 2358283 -64309722 + LTR8 LTR ERV1 3 78 -613 545 211 0 0 chr20 2358288 2358383 -64309622 - LTR8A LTR ERV1 -464 263 169 759 236 89 13 chr20 2358421 2358646 -64309359 - MER21B LTR ERV1 -621 242 1 3329 208 111 50 chr20 2358651 2360351 -64307654 - L1MB5 LINE L1 -533 5647 3841 240 330 38 0 chr20 2363441 2363547 -64304458 + MIR SINE MIR 42 151 -57 1298 91 0 17 chr20 2363946 2364121 -64303884 + AluSc SINE Alu 132 303 -6 347 245 102 10 chr20 2364214 2364312 -64303693 + MIR SINE MIR 41 147 -115 842 111 0 15 chr20 2364640 2364775 -64303230 - FLAM_C SINE Alu 0 133 1 2151 130 0 0 chr20 2367869 2368169 -64299836 + AluSx SINE Alu 1 300 -12 673 226 164 0 chr20 2368300 2368508 -64299497 - MIR SINE MIR -6 256 15 268 265 128 0 chr20 2368518 2368635 -64299370 + L2 LINE L2 2618 2749 -565 2294 100 0 3 chr20 2368635 2368936 -64299069 + AluSq SINE Alu 1 300 -13 993 244 111 31 chr20 2370246 2370697 -64297308 + L2 LINE L2 2817 3303 -10 * 1178 264 131 64 chr20 2370678 2370720 -64297285 + L2 LINE L2 2159 2197 -1117 2220 93 0 66 chr20 2370720 2371053 -64296952 - AluSx SINE Alu -1 311 1 1178 264 131 64 chr20 2371053 2371744 -64296261 + L2 LINE L2 2197 2941 -373 190 286 143 71 chr20 2371745 2371885 -64296120 - MIR SINE MIR -78 184 35 538 195 120 25 chr20 2371993 2372193 -64295812 - L2 LINE L2 -87 3226 3008 3812 182 68 11 chr20 2372235 2372397 -64295608 - L1MB7 LINE L1 -244 5940 5789 1848 125 83 3 chr20 2372397 2372709 -64295296 + MER44D DNA MER2_type 1 607 -2 3812 182 68 11 chr20 2372709 2373274 -64294731 - L1MB7 LINE L1 -395 5789 5258 1814 130 53 33 chr20 2373274 2373573 -64294432 - AluJb SINE Alu -7 305 1 3812 182 68 11 chr20 2373573 2374074 -64293931 - L1MB7 LINE L1 -926 5258 4625 898 206 104 28 chr20 2374226 2374564 -64293441 - MER58B DNA MER1_type -13 328 1 1975 99 18 4 chr20 2374807 2375079 -64292926 + AluSq SINE Alu 2 277 -36 225 269 103 26 chr20 2375176 2375254 -64292751 - LTR41 LTR ERVL -180 593 510 680 110 0 0 chr20 2375941 2376041 -64291964 + AluSp/q SINE Alu 214 313 0 837 170 79 0 chr20 2376076 2376241 -64291764 - LTR41 LTR ERVL -595 178 1 783 185 7 22 chr20 2376872 2377007 -64290998 + FLAM_C SINE Alu 1 133 0 2123 108 0 0 chr20 2377794 2378063 -64289942 - AluSx SINE Alu -17 295 27 792 134 0 52 chr20 2378428 2378562 -64289443 - FLAM_C SINE Alu -5 128 2 1855 210 28 13 chr20 2379538 2379928 -64288077 + MSTD LTR MaLR 1 396 0 186 254 0 0 chr20 2380621 2380688 -64287317 + GA-rich Low_complexity Low_complexity 2 68 0 387 217 198 76 chr20 2381589 2381908 -64286097 - LTR16A LTR ERVL -93 364 8 209 330 11 11 chr20 2384399 2384487 -64283518 - L2 LINE L2 -12 3260 3173 2855 248 120 37 chr20 2385653 2385719 -64282286 - L1MC4a LINE L1 -743 5403 5344 2156 108 35 0 chr20 2385719 2386007 -64281998 + AluSp SINE Alu 1 298 -15 2855 248 120 37 chr20 2386007 2386108 -64281897 - L1MC4a LINE L1 -802 5344 5253 1021 201 106 0 chr20 2386108 2386307 -64281698 - MER58A DNA MER1_type -1 223 4 2855 248 120 37 chr20 2386307 2387726 -64280279 - L1MC4a LINE L1 -893 5253 4762 25 40 0 20 chr20 2387961 2387988 -64280017 + AT_rich Low_complexity Low_complexity 1 28 -21 1882 146 3 7 chr20 2387988 2388275 -64279730 + AluJb SINE Alu 1 286 -26 25 40 0 20 chr20 2388275 2388297 -64279708 + AT_rich Low_complexity Low_complexity 28 49 0 334 321 136 18 chr20 2388301 2388522 -64279483 + L1MC5 LINE L1 7610 7856 -105 720 313 84 10 chr20 2388654 2388964 -64279041 + MLT1I LTR MaLR 63 395 -14 298 304 0 54 chr20 2389073 2389097 -64278908 + GA-rich Low_complexity Low_complexity 3 27 -81 795 160 15 0 chr20 2389097 2389228 -64278777 + FLAM_C SINE Alu 1 133 0 298 304 0 54 chr20 2389228 2389315 -64278690 + GA-rich Low_complexity Low_complexity 27 108 0 222 62 0 0 chr20 2389707 2389739 -64278266 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1323 108 0 0 chr20 2389753 2389929 -64278076 - AluSq SINE Alu -3 310 135 243 295 0 0 chr20 2390181 2390259 -64277746 + (CAAAT)n Simple_repeat Simple_repeat 5 82 0 1533 172 41 7 chr20 2390365 2390694 -64277311 + MER33 DNA MER1_type 1 324 0 1500 200 62 0 chr20 2390704 2391024 -64276981 + MER58B DNA MER1_type 2 341 0 1778 120 0 0 chr20 2391074 2391315 -64276690 - AluSc SINE Alu -6 303 63 896 296 25 68 chr20 2391417 2391900 -64276105 + L2 LINE L2 2851 3312 -1 1918 159 0 3 chr20 2393716 2394012 -64273993 + AluJb SINE Alu 5 292 -20 341 274 42 0 chr20 2394591 2394686 -64273319 + MLT1I LTR MaLR 63 161 -248 2228 106 0 3 chr20 2394894 2395205 -64272800 - AluSg SINE Alu 0 310 1 2981 282 96 38 chr20 2395212 2396024 -64271981 - L2 LINE L2 -46 3267 2504 2265 79 3 0 chr20 2396024 2396316 -64271689 + AluSp SINE Alu 1 293 -20 2981 282 96 38 chr20 2396316 2396961 -64271044 - L2 LINE L2 -809 2504 1725 238 278 148 46 chr20 2397169 2397277 -64270728 - L2 LINE L2 -13 3259 3141 2072 108 3 0 chr20 2397300 2397596 -64270409 + AluSp SINE Alu 1 297 -16 827 244 17 60 chr20 2397868 2398102 -64269903 - MIR SINE MIR -11 251 28 1388 170 61 0 chr20 2398103 2398350 -64269655 - AluJb SINE Alu -50 262 1 2758 13 0 0 chr20 2398411 2398720 -64269285 + AluYa5 SINE Alu 3 311 0 617 201 27 85 chr20 2399174 2399398 -64268607 + L1MC5 LINE L1 7639 7849 -112 228 284 110 32 chr20 2399437 2399592 -64268413 + MIR SINE MIR 95 261 -1 43935 44 5 2 chr20 2400051 2406184 -64261821 + L1PA4 LINE L1 3 6155 0 2359 63 3 3 chr20 2406207 2406510 -64261495 + AluSp SINE Alu 1 303 -10 214 370 0 0 chr20 2406688 2406761 -64261244 - MIR SINE MIR 0 262 190 384 191 61 69 chr20 2406938 2407069 -64260936 + L1MC5 LINE L1 7800 7929 -32 372 102 0 102 chr20 2408810 2408898 -64259107 + FRAM/FAM SINE Alu 1 78 -88 25 31 0 0 chr20 2408903 2408935 -64259070 + AT_rich Low_complexity Low_complexity 1 32 0 2188 225 86 22 chr20 2409020 2409686 -64258319 + MER67C LTR ERV1 3 710 0 3041 112 38 42 chr20 2409902 2410328 -64257677 - LOR1a LTR ERV1 0 497 72 1858 153 13 3 chr20 2410328 2410635 -64257370 - AluJb SINE Alu -2 310 1 3041 112 38 42 chr20 2410635 2410707 -64257298 - LOR1a LTR ERV1 -425 72 1 391 171 13 0 chr20 2410831 2410907 -64257098 + L1MC1 LINE L1 6257 6333 0 5305 192 66 21 chr20 2411008 2412029 -64255976 + L1MB5 LINE L1 4004 4978 -1196 1673 134 13 59 chr20 2412029 2412335 -64255670 + AluJo SINE Alu 1 292 -20 5305 192 66 21 chr20 2412335 2413270 -64254735 + L1MB5 LINE L1 4978 6065 -109 465 122 58 6 chr20 2413359 2413467 -64254538 + L1MB4 LINE L1 6046 6158 -16 23 33 0 0 chr20 2413852 2413882 -64254123 + AT_rich Low_complexity Low_complexity 1 30 0 1766 145 0 63 chr20 2413925 2414319 -64253686 + AluSx SINE Alu 1 373 0 319 351 6 6 chr20 2415180 2415354 -64252651 + (TTAGGG)n Simple_repeat Simple_repeat 1 174 0 598 184 68 0 chr20 2415453 2415556 -64252449 + FLAM_A SINE Alu 12 121 -21 271 305 23 15 chr20 2415572 2415703 -64252302 + (TTAGGG)n Simple_repeat Simple_repeat 1 132 0 323 322 20 0 chr20 2415980 2416129 -64251876 + (TTAGGG)n Simple_repeat Simple_repeat 3 154 0 342 250 17 108 chr20 2416493 2416613 -64251392 + L1MC4 LINE L1 6595 6703 -1339 189 171 0 0 chr20 2416620 2416655 -64251350 + (TA)n Simple_repeat Simple_repeat 2 36 0 246 167 50 33 chr20 2416655 2416715 -64251290 - MLT2D LTR ERVL -137 277 217 1797 144 0 38 chr20 2416719 2417032 -64250973 - AluJo SINE Alu -11 301 1 22 0 0 0 chr20 2417077 2417099 -64250906 + AT_rich Low_complexity Low_complexity 1 22 0 1948 146 0 9 chr20 2417227 2417542 -64250463 - AluSx SINE Alu 0 312 1 1843 126 74 44 chr20 2418002 2418366 -64249639 + THE1C LTR MaLR 1 375 0 231 345 0 0 chr20 2418511 2418624 -64249381 + (CCCTAA)n Simple_repeat Simple_repeat 6 118 0 652 153 144 144 chr20 2418665 2418887 -64249118 + MLT2D LTR ERVL 193 414 0 828 148 0 16 chr20 2419577 2419705 -64248300 + FLAM_C SINE Alu 2 127 -6 21 0 0 0 chr20 2419705 2419726 -64248279 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr20 2419824 2419847 -64248158 + (TTTTA)n Simple_repeat Simple_repeat 1 23 0 1408 147 0 9 chr20 2421892 2422116 -64245889 + AluJb SINE Alu 1 222 -90 3802 121 28 2 chr20 2422116 2422679 -64245326 + MER41B LTR ERV1 1 578 -57 1095 135 0 0 chr20 2422903 2423073 -64244932 - AluSg/x SINE Alu -9 301 132 459 92 15 0 chr20 2423080 2423145 -64244860 + MER41A LTR ERV1 489 554 0 611 51 51 0 chr20 2423145 2423224 -64244781 + AluSg/x SINE Alu 216 298 -11 1518 148 38 4 chr20 2423274 2423537 -64244468 + AluJb SINE Alu 12 283 -29 523 93 289 0 chr20 2424019 2424116 -64243889 - FLAM_C SINE Alu -5 128 4 3558 122 22 76 chr20 2424814 2425340 -64242665 - MER41B LTR ERV1 0 635 151 2186 88 27 0 chr20 2425340 2425636 -64242369 - AluSx SINE Alu 0 312 9 3558 122 22 76 chr20 2425636 2425780 -64242225 - MER41B LTR ERV1 -484 151 1 490 149 0 0 chr20 2425873 2425960 -64242045 + L1MB7 LINE L1 6091 6177 -7 654 309 74 8 chr20 2426047 2426303 -64241702 + HAL1 LINE L1 482 754 -1753 795 259 0 11 chr20 2426355 2426540 -64241465 + MER20 DNA MER1_type 37 219 0 369 295 0 9 chr20 2426541 2426653 -64241352 + HAL1 LINE L1 748 858 -1649 317 306 18 18 chr20 2427485 2427596 -64240409 - MIR SINE MIR -64 198 88 273 379 86 8 chr20 2429130 2429492 -64238513 - L2 LINE L2 -346 2968 2579 427 275 150 15 chr20 2429507 2429707 -64238298 + MIR SINE MIR 2 228 -34 424 212 0 117 chr20 2429748 2429854 -64238151 + MER45B DNA AcHobo 2 90 -1491 2161 86 20 0 chr20 2429854 2430146 -64237859 - AluSx SINE Alu -14 298 1 424 212 0 117 chr20 2430146 2430176 -64237829 + MER45B DNA AcHobo 90 122 -1459 1101 227 4 34 chr20 2430178 2430313 -64237692 + AluJb SINE Alu 1 138 -174 2128 118 0 13 chr20 2430313 2430627 -64237378 + AluSx SINE Alu 1 310 -2 2098 134 3 0 chr20 2430631 2430936 -64237069 + AluSx SINE Alu 1 306 -6 1101 227 4 34 chr20 2430936 2431064 -64236941 + AluJb SINE Alu 141 261 -51 327 66 16 33 chr20 2431070 2431131 -64236874 + (GGAGAA)n Simple_repeat Simple_repeat 3 62 0 3710 209 32 2 chr20 2431135 2431966 -64236039 + MER45B DNA AcHobo 142 1040 0 768 270 140 32 chr20 2432310 2432718 -64235287 - LTR16A1 LTR ERVL -4 453 2 282 353 67 0 chr20 2432893 2433012 -64234993 + MIR SINE MIR 120 246 -16 261 277 60 0 chr20 2433327 2433410 -64234595 + L2 LINE L2 3201 3288 -25 771 103 0 0 chr20 2433556 2433673 -64234332 + AluY SINE Alu 191 307 -4 1219 213 100 68 chr20 2434163 2434225 -64233780 - Charlie4a DNA MER1_type -1454 507 448 1982 124 24 0 chr20 2434225 2434523 -64233482 - AluSx SINE Alu -7 305 1 1219 213 100 68 chr20 2434523 2434949 -64233056 - Charlie4a DNA MER1_type -1513 448 3 812 170 0 0 chr20 2435214 2435349 -64232656 - FLAM_C SINE Alu 0 143 9 324 297 102 0 chr20 2435982 2436110 -64231895 + MIR SINE MIR 48 188 -74 209 312 64 16 chr20 2436719 2436844 -64231161 - L2 LINE L2 -186 3086 2956 2202 101 3 3 chr20 2439206 2439514 -64228491 - AluSg SINE Alu -2 308 1 2020 122 14 0 chr20 2439604 2439899 -64228106 + AluSx SINE Alu 1 299 -13 340 281 143 70 chr20 2440402 2440584 -64227421 - L1ME LINE L1 -298 5823 5656 2095 127 0 6 chr20 2440584 2440898 -64227107 + AluSx SINE Alu 1 312 0 340 281 143 70 chr20 2440898 2441171 -64226834 - L1ME LINE L1 -465 5656 5335 633 211 121 115 chr20 2441283 2441822 -64226183 - MER34 LTR ERV1 0 542 1 1307 73 23 0 chr20 2441924 2442101 -64225904 - AluSg/x SINE Alu -15 297 117 2187 120 0 0 chr20 2442180 2442488 -64225517 + AluSx SINE Alu 1 308 -4 980 223 168 59 chr20 2442542 2442964 -64225041 - MER110A LTR ERV1 0 468 1 2530 207 25 30 chr20 2443093 2443129 -64224876 - MER110A-int LTR ERV1 -31 4616 4581 2163 87 3 45 chr20 2443129 2443441 -64224564 - AluSx SINE Alu -13 299 1 2530 207 25 30 chr20 2443441 2443973 -64224032 - MER110A-int LTR ERV1 -66 4581 4051 1519 160 113 7 chr20 2444003 2444278 -64223727 + AluJo SINE Alu 1 304 -8 850 237 0 0 chr20 2444281 2444437 -64223568 + AluJo/FRAM SINE Alu 132 287 -25 207 114 0 0 chr20 2444444 2444479 -64223526 + (CATA)n Simple_repeat Simple_repeat 2 36 0 1555 209 84 28 chr20 2444499 2444892 -64223113 - MER110A-int LTR ERV1 -622 4025 3611 709 72 0 40 chr20 2444893 2445018 -64222987 + (GAA)n Simple_repeat Simple_repeat 3 122 0 822 102 36 18 chr20 2445020 2445187 -64222818 + GA-rich Low_complexity Low_complexity 3 172 0 1730 218 95 18 chr20 2445192 2445633 -64222372 - MER110A-int LTR ERV1 -1049 3598 3124 761 218 68 34 chr20 2445724 2445930 -64222075 - MER110A-int LTR ERV1 -1681 2966 2754 230 271 24 38 chr20 2446361 2446453 -64221552 - MER5A DNA MER1_type -87 102 1 550 256 108 74 chr20 2446592 2446982 -64221023 - MER31-int LTR ERV1 -1870 3066 2664 478 178 89 32 chr20 2447060 2447217 -64220788 - MER31-int LTR ERV1 -2563 2373 2208 2366 96 3 0 chr20 2447582 2447894 -64220111 + AluSp SINE Alu 1 313 0 403 232 66 13 chr20 2448128 2448279 -64219726 - MER31-int LTR ERV1 -3470 1466 1308 1337 195 75 10 chr20 2448289 2448581 -64219424 - AluJo SINE Alu -1 311 1 1946 113 0 0 chr20 2448686 2448942 -64219063 + AluSx SINE Alu 1 256 -56 378 129 71 0 chr20 2449052 2449122 -64218883 - L1MC2 LINE L1 0 6624 6550 2166 117 0 7 chr20 2449126 2449425 -64218580 + AluSx SINE Alu 1 297 -15 984 154 0 12 chr20 2449438 2449600 -64218405 + AluJb SINE Alu 147 306 -6 9623 201 86 43 chr20 2449602 2451202 -64216803 - L1MC2 LINE L1 -68 6556 5026 1579 182 27 24 chr20 2451202 2451499 -64216506 + AluJo SINE Alu 1 298 -14 9623 201 86 43 chr20 2451499 2451743 -64216262 - L1MC2 LINE L1 -1598 5026 4794 1911 154 17 0 chr20 2451743 2452041 -64215964 - AluSx SINE Alu -9 303 1 9623 201 86 43 chr20 2452041 2453106 -64214899 - L1MC2 LINE L1 -1830 4794 3776 2339 85 3 10 chr20 2453106 2453412 -64214593 - AluSq SINE Alu -9 304 1 9623 201 86 43 chr20 2453412 2453489 -64214516 - L1MC2 LINE L1 -2848 3776 3704 285 116 0 0 chr20 2453489 2453532 -64214473 + Alu SINE Alu 249 291 -11 9623 201 86 43 chr20 2453532 2454297 -64213708 - L1MC2 LINE L1 -2920 3704 2973 2278 113 0 0 chr20 2454297 2454606 -64213399 - AluSx SINE Alu -3 309 1 9623 201 86 43 chr20 2454606 2455304 -64212701 - L1MC2 LINE L1 -3651 2973 2306 2224 107 27 0 chr20 2455304 2455604 -64212401 - AluSg SINE Alu -2 308 1 9623 201 86 43 chr20 2455604 2455714 -64212291 - L1MC2 LINE L1 -4318 2306 2202 1424 177 135 0 chr20 2455714 2455980 -64212025 + AluJo SINE Alu 1 302 0 9623 201 86 43 chr20 2455980 2456746 -64211259 - L1MC2 LINE L1 -4422 2202 937 1697 120 0 4 chr20 2456750 2456991 -64211014 - AluSg/x SINE Alu -7 305 66 271 176 78 0 chr20 2456993 2457044 -64210961 - L1MC2 LINE L1 -6021 405 351 1371 193 96 12 chr20 2457102 2457424 -64210581 - MER39 LTR ERV1 -2 705 357 642 153 105 8 chr20 2457442 2457566 -64210439 - MER39 LTR ERV1 -567 140 5 241 247 52 0 chr20 2458459 2458536 -64209469 + MIR3 SINE MIR 113 193 -15 186 379 48 82 chr20 2459191 2459460 -64208545 - L2 LINE L2 -91 3181 2922 2493 70 0 0 chr20 2459781 2460079 -64207926 + AluY SINE Alu 1 298 -13 639 195 42 0 chr20 2460182 2460300 -64207705 + MER3 DNA MER1_type 32 154 -55 * 2234 213 31 9 chr20 2460296 2460846 -64207159 + MER3 DNA MER1_type 2063 2624 0 2226 104 0 0 chr20 2461902 2462199 -64205806 + AluSx SINE Alu 14 310 -2 692 209 14 98 chr20 2462605 2462763 -64205242 + MER3 DNA MER1_type 1 138 -71 1146 150 45 0 chr20 2462763 2462960 -64205045 + L1MA8 LINE L1 6062 6271 -20 1728 171 3 10 chr20 2462960 2463253 -64204752 - AluJo SINE Alu -21 291 1 1146 150 45 0 chr20 2463253 2463275 -64204730 + L1MA8 LINE L1 6271 6291 0 692 209 14 98 chr20 2463275 2463331 -64204674 + MER3 DNA MER1_type 138 197 -12 2475 67 0 0 chr20 2463376 2463675 -64204330 - AluY SINE Alu -12 299 1 782 237 137 19 chr20 2464411 2464622 -64203383 - MIR SINE MIR -4 258 23 816 122 0 16 chr20 2464623 2464746 -64203259 - FLAM_C SINE Alu 0 143 23 2080 139 7 0 chr20 2464984 2465285 -64202720 + AluSx SINE Alu 2 304 -8 390 223 93 118 chr20 2465288 2465543 -64202462 + MIR SINE MIR 10 262 0 5415 175 160 110 chr20 2465814 2466782 -64201223 + L1MDa LINE L1 18 1245 -5295 816 163 7 14 chr20 2466782 2466923 -64201082 - FLAM_C SINE Alu -2 141 2 5415 175 160 110 chr20 2466923 2467535 -64200470 + L1MDa LINE L1 1245 1825 -4715 508 233 94 59 chr20 2468305 2468507 -64199498 + MER63A DNA MER1_type 2 210 0 301 231 0 0 chr20 2468614 2468666 -64199339 + Tigger5 DNA MER2_type 4 55 -2268 * 303 197 42 14 chr20 2468635 2468706 -64199299 + Tigger5 DNA MER2_type 2251 2323 0 534 172 11 11 chr20 2468749 2468842 -64199163 + Tigger5 DNA MER2_type 2231 2323 0 * 1119 209 26 9 chr20 2468840 2469070 -64198935 - MLT1E3 LTR MaLR 0 624 391 6722 182 20 11 chr20 2469138 2469635 -64198370 + L1P4 LINE L1 3920 4411 -1755 189 0 0 0 chr20 2469635 2469656 -64198349 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 6722 182 20 11 chr20 2469656 2470749 -64197256 + L1P4 LINE L1 4411 5528 -638 212 0 36 0 chr20 2470749 2470777 -64197228 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 6722 182 20 11 chr20 2470777 2470844 -64197161 + L1P4 LINE L1 5528 5593 -573 422 190 0 80 chr20 2470844 2470944 -64197061 - MLT1E3 LTR MaLR -433 193 102 875 155 7 0 chr20 2470944 2471086 -64196919 + FLAM_C SINE Alu 1 143 0 318 210 0 0 chr20 2471087 2471149 -64196856 - MLT1E3 LTR MaLR -514 112 51 387 280 0 11 chr20 2471197 2471290 -64196715 - L2 LINE L2 -30 3283 3192 712 161 0 146 chr20 2472143 2472348 -64195657 - FAM SINE Alu -7 42 1 225 303 123 25 chr20 2472375 2472774 -64195231 - L1M4 LINE L1 -1455 4691 4254 2665 45 0 0 chr20 2472774 2473085 -64194920 - AluY SINE Alu 0 311 1 422 283 89 108 chr20 2473432 2473962 -64194043 - L1M4 LINE L1 -2324 3822 3304 2111 104 49 0 chr20 2473962 2474249 -64193756 - AluSx SINE Alu -9 303 3 422 283 89 108 chr20 2474249 2474347 -64193658 - L1M4 LINE L1 -2842 3304 3206 357 346 66 50 chr20 2474419 2474737 -64193268 - L1MC/D LINE L1 -2071 5737 5415 520 206 71 0 chr20 2474744 2474870 -64193135 - L1MB1 LINE L1 0 6168 6034 2296 104 3 0 chr20 2476126 2476433 -64191572 - AluSx SINE Alu -4 308 1 973 112 0 0 chr20 2476441 2476566 -64191439 - AluSq/x SINE Alu -187 125 1 1628 122 76 11 chr20 2476865 2477128 -64190877 + AluJb SINE Alu 11 290 -22 2175 109 3 0 chr20 2477264 2477549 -64190456 + AluSx SINE Alu 1 286 -26 2168 110 0 7 chr20 2478602 2478945 -64189060 - AluSx SINE Alu 0 345 5 316 348 56 17 chr20 2478948 2479126 -64188879 + MIR SINE MIR 39 223 -39 258 24 122 0 chr20 2479398 2479439 -64188566 - MADE1 DNA Mariner 0 80 35 329 113 81 0 chr20 2479483 2479545 -64188460 - MADE1 DNA Mariner -12 68 2 841 226 0 0 chr20 2479817 2479972 -64188033 - FRAM SINE Alu -21 155 1 29 0 0 0 chr20 2481684 2481713 -64186292 + AT_rich Low_complexity Low_complexity 1 29 0 1972 145 0 0 chr20 2481719 2482001 -64186004 - AluSx SINE Alu -30 282 1 559 262 36 42 chr20 2482236 2482359 -64185646 + MER5B DNA MER1_type 11 134 -44 1765 231 113 45 chr20 2482359 2482689 -64185316 + MLT1E LTR MaLR 1 386 -207 2249 112 3 0 chr20 2482689 2482985 -64185020 - AluSg SINE Alu -13 297 1 1765 231 113 45 chr20 2482985 2483209 -64184796 + MLT1E LTR MaLR 386 593 0 559 262 36 42 chr20 2483209 2483253 -64184752 + MER5B DNA MER1_type 134 177 -1 2784 13 0 0 chr20 2483388 2483691 -64184314 + AluYa5 SINE Alu 1 303 -8 272 264 38 31 chr20 2484020 2484042 -64183963 - L1MA10 LINE L1 0 6334 6313 1894 207 32 74 chr20 2484042 2484568 -64183437 - L1ME1 LINE L1 -11 6155 5652 1354 239 50 119 chr20 2484625 2485262 -64182743 - MLT1E LTR MaLR 0 593 1 681 251 40 87 chr20 2485267 2485613 -64182392 - MLT1E-int LTR MaLR -5 1366 1037 2744 140 34 5 chr20 2485613 2486027 -64181978 - MSTB LTR MaLR 0 426 1 347 263 100 50 chr20 2486044 2486364 -64181641 - L1ME LINE L1 -3137 3245 2910 855 231 61 4 chr20 2486518 2486795 -64181210 - L1M4 LINE L1 -2275 3871 3579 2076 101 3 20 chr20 2486832 2487138 -64180867 - L1MA8 LINE L1 -3 6288 5988 2287 180 90 14 chr20 2487184 2487748 -64180257 + MLT1E2 LTR MaLR 1 622 -4 339 250 38 50 chr20 2487757 2487900 -64180105 - L1ME LINE L1 -4862 1510 1251 285 51 0 0 chr20 2487909 2487948 -64180057 + (TG)n Simple_repeat Simple_repeat 2 40 0 393 267 52 33 chr20 2487977 2488302 -64179703 - L1ME LINE L1 -5025 1347 1011 486 0 0 0 chr20 2488496 2488550 -64179455 + (TG)n Simple_repeat Simple_repeat 1 54 0 562 139 0 0 chr20 2488550 2488629 -64179376 - AluJb SINE Alu -196 116 38 327 302 8 31 chr20 2488891 2488904 -64179101 + L1PA8A LINE L1 5693 5705 -426 2406 69 0 0 chr20 2488904 2489194 -64178811 - AluY SINE Alu -21 290 1 327 302 8 31 chr20 2489194 2489309 -64178696 + L1PA8A LINE L1 5705 5818 -313 * 868 248 24 16 chr20 2489195 2489441 -64178564 + L1ME3A LINE L1 5704 5951 -219 348 294 110 41 chr20 2489723 2490312 -64177693 + L1ME4a LINE L1 3969 4598 -1548 309 296 52 28 chr20 2490319 2490636 -64177369 + L1ME4a LINE L1 5659 6041 -80 1901 154 3 13 chr20 2490648 2491005 -64177000 + AluJb SINE Alu 1 354 0 282 186 0 17 chr20 2491008 2491067 -64176938 + L1ME4a LINE L1 6060 6117 -4 2216 116 7 0 chr20 2491097 2491391 -64176614 + AluSq SINE Alu 1 296 -17 180 302 142 41 chr20 2491943 2492211 -64175794 + L2 LINE L2 2252 2546 -768 1802 146 90 36 chr20 2492226 2492582 -64175423 - THE1C LTR MaLR 0 375 1 388 322 100 31 chr20 2492860 2493251 -64174754 + L2 LINE L2 2560 2977 -337 2163 139 0 0 chr20 2493451 2493753 -64174252 - AluSx SINE Alu -10 302 1 461 281 34 7 chr20 2494400 2494546 -64173459 - L2 LINE L2 -302 3011 2862 234 152 0 0 chr20 2495525 2495571 -64172434 - MADE1 DNA Mariner 0 80 35 2320 96 0 3 chr20 2495575 2495876 -64172129 + AluSx SINE Alu 1 300 -12 348 24 0 0 chr20 2495943 2495984 -64172021 + (TG)n Simple_repeat Simple_repeat 2 42 0 2031 135 0 32 chr20 2496711 2497023 -64170982 - AluSq SINE Alu -11 302 1 655 236 43 0 chr20 2497137 2497298 -64170707 - MER5B DNA MER1_type -6 172 5 719 73 0 0 chr20 2497333 2497429 -64170576 + L1PB1 LINE L1 6056 6151 0 2007 109 33 7 chr20 2497620 2497933 -64170072 - AluSx SINE Alu 0 320 1 201 39 0 0 chr20 2498081 2498107 -64169898 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 559 86 0 0 chr20 2498294 2498364 -64169641 - AluSq/x SINE Alu -185 128 59 849 158 0 8 chr20 2498364 2498497 -64169508 + AluSg/x SINE Alu 155 286 -26 180 0 0 0 chr20 2498521 2498541 -64169464 + (A)n Simple_repeat Simple_repeat 1 20 0 272 62 167 0 chr20 2498769 2498817 -64169188 - AluJo SINE Alu 0 302 247 955 140 0 20 chr20 2498817 2498967 -64169038 - AluJo SINE Alu -165 147 1 731 186 69 72 chr20 2499551 2499621 -64168384 + L1M4 LINE L1 4296 4365 -1781 2264 99 6 43 chr20 2499621 2499766 -64168239 + AluSx SINE Alu 1 150 -162 2424 74 0 7 chr20 2499766 2500062 -64167943 + AluY SINE Alu 1 294 -17 2264 99 6 43 chr20 2500062 2500240 -64167765 + AluSx SINE Alu 150 312 0 731 186 69 72 chr20 2500240 2500400 -64167605 + L1M4 LINE L1 4365 4527 -1619 1165 208 23 0 chr20 2500400 2500616 -64167389 + MER58A DNA MER1_type 1 221 -3 731 186 69 72 chr20 2500616 2500690 -64167315 + L1M4 LINE L1 4527 4600 -1546 212 307 60 53 chr20 2500690 2500784 -64167221 + MIR SINE MIR 99 196 -66 2184 98 35 0 chr20 2500784 2501071 -64166934 + AluSp SINE Alu 1 297 -16 212 307 60 53 chr20 2501071 2501126 -64166879 + MIR SINE MIR 196 249 -13 352 322 76 9 chr20 2501751 2501962 -64166043 - L1M4 LINE L1 -1210 4936 4712 737 248 142 77 chr20 2502053 2502496 -64165509 + MLT1H LTR MaLR 14 485 -64 363 310 57 7 chr20 2502573 2502801 -64165204 + L1MEc LINE L1 2152 2355 -3860 2766 197 134 41 chr20 2503707 2504443 -64163562 + MER21B LTR ERV1 1 805 -58 1788 126 74 95 chr20 2504519 2504899 -64163106 - MLT1B LTR MaLR -16 374 3 249 286 66 22 chr20 2505198 2505289 -64162716 + L1MEd LINE L1 577 671 -5448 363 260 32 76 chr20 2505358 2505476 -64162529 - HAL1b LINE L1 -963 385 263 2294 106 0 0 chr20 2505476 2505785 -64162220 - AluSx SINE Alu 0 309 1 363 260 32 76 chr20 2505785 2506007 -64161998 - HAL1b LINE L1 -1085 263 59 228 67 0 0 chr20 2506106 2506136 -64161869 + (T)n Simple_repeat Simple_repeat 1 30 0 23 0 0 0 chr20 2506992 2507015 -64160990 + AT_rich Low_complexity Low_complexity 1 23 0 2382 88 13 3 chr20 2507068 2507374 -64160631 + AluSq SINE Alu 1 309 -4 2187 124 0 0 chr20 2507516 2507853 -64160152 - AluSx SINE Alu 0 337 1 287 281 31 31 chr20 2508087 2508183 -64159822 + L2 LINE L2 3199 3294 -19 254 269 148 34 chr20 2508249 2508398 -64159607 - MIR SINE MIR -71 191 26 2246 94 10 19 chr20 2509067 2509374 -64158631 - AluSg SINE Alu -6 304 1 54 49 0 0 chr20 2509880 2509962 -64158043 + AT_rich Low_complexity Low_complexity 1 82 0 197 381 69 38 chr20 2510713 2511004 -64157001 + L2 LINE L2 2971 3270 -2 1029 140 0 0 chr20 2511012 2511190 -64156815 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 374 258 122 52 chr20 2513479 2513549 -64154456 + L1 LINE L1 4637 4701 -1445 1704 162 88 0 chr20 2513549 2513833 -64154172 + AluJo SINE Alu 1 309 -3 374 258 122 52 chr20 2513833 2514211 -64153794 + L1 LINE L1 4701 5108 -1038 29 28 0 0 chr20 2514226 2514262 -64153743 + AT_rich Low_complexity Low_complexity 1 36 0 2181 108 7 0 chr20 2514270 2514556 -64153449 + AluSx SINE Alu 5 292 -20 201 121 0 0 chr20 2515327 2515360 -64152645 + (TC)n Simple_repeat Simple_repeat 2 34 0 258 314 66 16 chr20 2515468 2515589 -64152416 + MIR3 SINE MIR 36 162 -46 333 221 19 32 chr20 2515672 2515826 -64152179 + GA-rich Low_complexity Low_complexity 3 154 0 771 213 55 40 chr20 2516669 2516815 -64151190 + MER3 DNA MER1_type 5 156 -53 2835 93 63 28 chr20 2516815 2516936 -64151069 - L1MA4 LINE L1 -4 6296 6181 2083 147 0 0 chr20 2516936 2517236 -64150769 - AluSx SINE Alu -12 300 1 2835 93 63 28 chr20 2517236 2517577 -64150428 - L1MA4 LINE L1 -119 6181 5818 771 213 55 40 chr20 2517577 2517632 -64150373 + MER3 DNA MER1_type 156 209 0 298 264 0 72 chr20 2517977 2518102 -64149903 - MER103 DNA DNA -1 165 50 367 214 34 0 chr20 2518195 2518284 -64149721 - MER96 DNA MER1_type? -83 92 1 1264 253 57 38 chr20 2518305 2518728 -64149277 - LTR47B LTR ERVL 0 443 13 1121 181 0 0 chr20 2519156 2519333 -64148672 + AluJb SINE Alu 135 311 -1 1158 174 4 85 chr20 2519343 2519602 -64148403 + MLT1D-int LTR MaLR 423 660 -711 919 273 5 0 chr20 2519661 2519870 -64148135 + MLT1D-int LTR MaLR 674 883 -488 908 209 5 56 chr20 2520012 2520227 -64147778 + MLT1D-int LTR MaLR 961 1164 -207 632 228 62 113 chr20 2520228 2520306 -64147699 + MLT1D LTR MaLR 111 191 -314 2410 88 0 3 chr20 2520306 2520611 -64147394 + AluSg SINE Alu 1 304 -6 632 228 62 113 chr20 2520611 2520707 -64147298 + MLT1D LTR MaLR 191 290 -215 1493 108 5 0 chr20 2520707 2520911 -64147094 + AluSg/x SINE Alu 94 298 -12 632 228 62 113 chr20 2520911 2521151 -64146854 + MLT1D LTR MaLR 290 505 0 1825 216 68 44 chr20 2521151 2521610 -64146395 - Cheshire DNA MER1_type -1909 511 42 2221 105 0 40 chr20 2521611 2521934 -64146071 + AluSx SINE Alu 1 310 -2 299 248 20 12 chr20 2522040 2522228 -64145777 - MIR SINE MIR -20 242 89 685 186 83 0 chr20 2522255 2522411 -64145594 + MER3 DNA MER1_type 9 130 -79 2179 109 10 3 chr20 2522481 2522775 -64145230 + AluSx SINE Alu 1 296 -16 615 205 342 13 chr20 2523709 2523943 -64144062 - LTR16C LTR ERVL -2 489 179 257 214 18 0 chr20 2524257 2524313 -64143692 + L2 LINE L2 3200 3256 -16 585 264 81 78 chr20 2524565 2525062 -64142943 - L1ME3A LINE L1 -115 6553 6056 308 253 114 40 chr20 2525115 2525344 -64142661 - L1ME LINE L1 -4944 780 403 1483 236 275 13 chr20 2525396 2525858 -64142147 - MLT1G1 LTR MaLR 0 595 13 2385 139 37 49 chr20 2526017 2526449 -64141556 - LTR3 LTR ERVK 0 429 3 566 276 100 49 chr20 2526622 2527013 -64140992 - L1ME LINE L1 -5658 412 2 2326 111 0 0 chr20 2527111 2527409 -64140596 + AluSx SINE Alu 1 298 -14 412 306 91 26 chr20 2527435 2527667 -64140338 - L1ME3A LINE L1 -1603 5041 4795 2266 124 27 24 chr20 2527673 2528045 -64139960 + THE1C LTR MaLR 1 373 -2 2652 34 0 0 chr20 2528046 2528340 -64139665 + AluY SINE Alu 1 294 -17 666 303 17 6 chr20 2528800 2528975 -64139030 - MER91A DNA MER1_type -1 195 19 948 247 9 9 chr20 2529014 2529237 -64138768 + MER58A DNA MER1_type 1 223 -1 7401 211 55 62 chr20 2529446 2529765 -64138240 - L1M4c LINE L1 -3520 3124 2804 1679 187 13 16 chr20 2529765 2530070 -64137935 + AluJo SINE Alu 1 304 -8 7401 211 55 62 chr20 2530070 2531247 -64136758 - L1M4c LINE L1 -3840 2804 1620 1565 120 5 0 chr20 2531247 2531463 -64136542 - AluSg/x SINE Alu -12 298 82 7401 211 55 62 chr20 2531463 2531810 -64136195 - L1M4c LINE L1 -5024 1620 1272 2320 95 10 3 chr20 2531810 2532114 -64135891 - AluSg SINE Alu -4 306 1 7401 211 55 62 chr20 2532114 2533204 -64134801 - L1M4c LINE L1 -5372 1272 5 183 275 0 66 chr20 2533878 2533969 -64134036 + MIR SINE MIR 66 150 -112 190 162 27 0 chr20 2534658 2534695 -64133310 + MIR SINE MIR 86 123 -139 357 24 0 0 chr20 2535685 2535727 -64132278 + (CA)n Simple_repeat Simple_repeat 2 43 0 1983 93 56 15 chr20 2535844 2536136 -64131869 - AluSc SINE Alu 0 303 1 2286 92 7 3 chr20 2536332 2536627 -64131378 + AluSx SINE Alu 1 296 -16 302 246 36 9 chr20 2536958 2537068 -64130937 + MIR SINE MIR 137 249 -13 7159 118 60 23 chr20 2537087 2537285 -64130720 + Tigger3b DNA MER2_type 3 192 -2836 2417 52 0 52 chr20 2537285 2537594 -64130411 + AluY SINE Alu 1 293 -18 7159 118 60 23 chr20 2537594 2538131 -64129874 + Tigger3b DNA MER2_type 192 708 -2320 2309 83 0 3 chr20 2538131 2538420 -64129585 - AluSg SINE Alu -22 288 1 7159 118 60 23 chr20 2538420 2538864 -64129141 + Tigger3b DNA MER2_type 708 1227 -4 275 61 0 0 chr20 2538964 2538997 -64129008 + U2 snRNA snRNA 1 33 -155 2051 108 3 46 chr20 2539215 2539521 -64128484 - AluSx SINE Alu -19 293 1 510 230 62 19 chr20 2539608 2539769 -64128236 - MLT1J2 LTR MaLR -14 436 269 1887 148 25 0 chr20 2541035 2541312 -64126693 + AluJo SINE Alu 1 284 -28 592 171 99 9 chr20 2541326 2541437 -64126568 + FLAM_C SINE Alu 2 122 -21 3033 179 29 22 chr20 2542724 2543277 -64124728 - MLT1F1 LTR MaLR 0 567 11 2514 96 0 0 chr20 2543328 2543640 -64124365 + AluSx SINE Alu 1 312 0 266 203 25 63 chr20 2543903 2543982 -64124023 - LTR16A1 LTR ERVL -379 78 3 275 287 48 115 chr20 2544130 2544228 -64123777 + L1MEd LINE L1 509 612 -5593 2625 138 16 36 chr20 2544228 2544671 -64123334 - Tigger2a DNA MER2_type 0 434 1 275 287 48 115 chr20 2544671 2544731 -64123274 + L1MEd LINE L1 612 652 -5553 2151 124 7 0 chr20 2544731 2545029 -64122976 + AluSp SINE Alu 1 300 -13 275 287 48 115 chr20 2545029 2545078 -64122927 + L1MEd LINE L1 652 703 -5502 327 301 109 0 chr20 2545078 2545261 -64122744 + L1MEd LINE L1 2167 2369 -4027 1820 143 35 11 chr20 2545263 2545549 -64122456 + AluJb SINE Alu 1 293 -19 265 295 62 16 chr20 2545824 2545953 -64122052 + MIR SINE MIR 127 261 -1 393 0 0 20 chr20 2546340 2546389 -64121616 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2244 92 7 0 chr20 2546389 2546671 -64121334 - AluSx SINE Alu -28 284 1 854 111 0 22 chr20 2547386 2547521 -64120484 - MER46A DNA MER2_type 0 236 105 584 80 0 10 chr20 2547522 2547622 -64120383 + L1MA3 LINE L1 5268 5366 -939 1098 113 7 0 chr20 2547622 2547772 -64120233 + AluSq/x SINE Alu 1 151 -162 1754 100 80 12 chr20 2547775 2547873 -64120132 + AluSg SINE Alu 35 125 -185 2405 66 0 7 chr20 2547873 2548230 -64119775 + AluY SINE Alu 1 311 0 1754 100 80 12 chr20 2548230 2548381 -64119624 + AluSg SINE Alu 125 301 -9 355 59 59 0 chr20 2548382 2548433 -64119572 + L1MA3 LINE L1 5778 5831 -474 1088 104 0 0 chr20 2548433 2548568 -64119437 + AluSq/x SINE Alu 1 135 -177 1762 160 35 3 chr20 2548568 2548855 -64119150 + AluJo SINE Alu 1 296 -16 194 189 0 0 chr20 2548981 2549018 -64118987 - L2 LINE L2 -13 3300 3264 234 234 0 0 chr20 2549030 2549077 -64118928 + L2 LINE L2 3226 3272 0 325 260 106 0 chr20 2549083 2549187 -64118818 - MIR SINE MIR -55 153 39 302 304 163 11 chr20 2549195 2549379 -64118626 - MLT1H1 LTR MaLR -10 545 334 245 219 0 16 chr20 2549988 2550052 -64117953 + (TA)n Simple_repeat Simple_repeat 2 64 0 1876 90 94 4 chr20 2550128 2550394 -64117611 - AluSx SINE Alu 0 312 23 208 139 0 0 chr20 2551213 2551249 -64116756 + (A)n Simple_repeat Simple_repeat 1 36 0 332 207 96 67 chr20 2552293 2552428 -64115577 + MER5B DNA MER1_type 5 143 -35 2129 87 24 13 chr20 2552880 2553178 -64114827 - AluSg SINE Alu -9 301 1 285 29 0 0 chr20 2560403 2560437 -64107568 + (TG)n Simple_repeat Simple_repeat 1 34 0 1854 100 0 4 chr20 2560440 2560680 -64107325 - AluSx SINE Alu -30 282 44 880 221 86 60 chr20 2561069 2561440 -64106565 + MLT1C LTR MaLR 44 467 0 2013 118 9 43 chr20 2561762 2561900 -64106105 + AluSx SINE Alu 1 142 -170 2300 99 0 13 chr20 2561900 2562203 -64105802 + AluSg SINE Alu 3 301 -9 2013 118 9 43 chr20 2562203 2562387 -64105618 + AluSx SINE Alu 142 312 0 1333 140 15 0 chr20 2564079 2564279 -64103726 + AluJb SINE Alu 87 289 -23 2073 40 84 71 chr20 2564291 2564587 -64103418 - AluY SINE Alu -11 300 1 387 322 76 12 chr20 2564664 2564835 -64103170 + MER5A DNA MER1_type 7 188 -1 1793 81 0 0 chr20 2565274 2565495 -64102510 - AluSx SINE Alu -91 221 1 1320 208 41 19 chr20 2566119 2566437 -64101568 + Charlie4a DNA MER1_type 17 341 -167 1228 191 37 0 chr20 2566443 2566658 -64101347 - AluJo SINE Alu -8 304 82 411 221 39 79 chr20 2566666 2566708 -64101297 + Charlie4a DNA MER1_type 387 429 -1532 2443 64 10 3 chr20 2566708 2567005 -64101000 - AluY SINE Alu -12 299 1 411 221 39 79 chr20 2567005 2567089 -64100916 + Charlie4a DNA MER1_type 429 508 0 953 224 40 0 chr20 2567282 2567510 -64100495 - LTR16A1 LTR ERVL 0 457 221 452 213 9 19 chr20 2567547 2567655 -64100350 - LTR16A1 LTR ERVL -332 125 19 36 0 0 0 chr20 2568470 2568506 -64099499 + AT_rich Low_complexity Low_complexity 1 36 0 225 0 0 0 chr20 2568587 2568612 -64099393 + (CA)n Simple_repeat Simple_repeat 2 26 0 412 226 117 109 chr20 2568655 2568815 -64099190 - L1MC4a LINE L1 -1886 5922 5765 1639 94 150 4 chr20 2568815 2569069 -64098936 - AluSx SINE Alu -11 291 1 412 226 117 109 chr20 2569069 2569152 -64098853 - L1MC4a LINE L1 -2043 5765 5674 1190 107 107 10 chr20 2569152 2569358 -64098647 + MER30 DNA MER1_type 4 229 -1 412 226 117 109 chr20 2569358 2569370 -64098635 - L1MC4a LINE L1 -2134 5674 5664 557 312 138 30 chr20 2569427 2569853 -64098152 - MLT1L LTR MaLR 0 615 144 748 245 18 0 chr20 2569860 2570023 -64097982 - MER5B DNA MER1_type -12 166 1 387 224 41 0 chr20 2570063 2570161 -64097844 - MLT1J LTR MaLR 0 511 410 593 192 64 8 chr20 2570164 2570289 -64097716 + AluJb SINE Alu 2 133 -179 609 257 90 37 chr20 2570289 2570534 -64097471 - MLT1J LTR MaLR -92 419 162 2405 115 0 0 chr20 2570928 2571232 -64096773 - AluSx SINE Alu -8 304 1 1217 198 93 28 chr20 2571260 2571584 -64096421 + LTR40c LTR ERVL 108 452 -13 399 220 70 10 chr20 2571605 2571705 -64096300 + HERVL40 LTR ERVL 1 106 -5424 497 263 77 13 chr20 2571879 2572035 -64095970 + HERVL40 LTR ERVL 917 1082 -4448 2005 149 26 0 chr20 2572135 2572437 -64095568 - AluJb SINE Alu -2 310 1 411 245 20 10 chr20 2572458 2572560 -64095445 + HERVL40 LTR ERVL 1279 1381 -4149 624 261 68 31 chr20 2572819 2573041 -64094964 + HERVL40 LTR ERVL 1377 1606 -3924 2296 104 0 0 chr20 2573096 2573394 -64094611 + AluSg SINE Alu 1 298 -12 2250 113 7 0 chr20 2573526 2573818 -64094187 + AluSx SINE Alu 1 294 -18 925 210 58 15 chr20 2573840 2574045 -64093960 - AluJo SINE Alu -45 267 54 1535 152 45 38 chr20 2574083 2574373 -64093632 - AluJo SINE Alu -20 292 1 1894 114 7 61 chr20 2574385 2574740 -64093265 - AluSx SINE Alu 0 339 1 9353 241 65 57 chr20 2574746 2575155 -64092850 + HERVL40 LTR ERVL 2684 3088 -2442 2440 93 0 10 chr20 2575155 2575466 -64092539 + AluSx SINE Alu 1 308 -4 9353 241 65 57 chr20 2575466 2575871 -64092134 + HERVL40 LTR ERVL 3088 3488 -2042 2042 126 61 0 chr20 2575871 2576165 -64091840 + AluSq SINE Alu 1 312 -1 9353 241 65 57 chr20 2576165 2578158 -64089847 + HERVL40 LTR ERVL 3488 5514 -16 1760 219 30 10 chr20 2578206 2578612 -64089393 + LTR40c LTR ERVL 39 452 -13 213 352 7 55 chr20 2578640 2578702 -64089303 - L2 LINE L2 -2886 428 365 1299 195 48 72 chr20 2578702 2579010 -64088995 - MLT1B LTR MaLR 0 390 93 2514 75 10 0 chr20 2579010 2579318 -64088687 - AluY SINE Alu 0 311 1 1299 195 48 72 chr20 2579318 2579409 -64088596 - MLT1B LTR MaLR -297 93 1 213 352 7 55 chr20 2579409 2579491 -64088514 - L2 LINE L2 -2949 365 291 824 200 85 0 chr20 2579527 2579692 -64088313 - AluJb SINE Alu -125 187 9 2384 83 3 0 chr20 2579875 2580177 -64087828 + AluY SINE Alu 1 303 -8 1142 267 29 22 chr20 2580181 2580567 -64087438 + L1ME3 LINE L1 5773 6161 -1 21 0 0 0 chr20 2580570 2580591 -64087414 + AT_rich Low_complexity Low_complexity 1 21 0 1695 163 3 68 chr20 2580673 2580803 -64087202 + AluJb SINE Alu 1 138 -174 2125 118 14 7 chr20 2580803 2581099 -64086906 - AluSq SINE Alu -15 298 1 1695 163 3 68 chr20 2581099 2581294 -64086711 + AluJb SINE Alu 138 305 -7 525 169 0 23 chr20 2581297 2581427 -64086578 + GA-rich Low_complexity Low_complexity 3 129 0 1380 62 0 0 chr20 2581427 2581606 -64086399 + (GAA)n Simple_repeat Simple_repeat 2 180 0 584 238 50 19 chr20 2581703 2581863 -64086142 - MER63A DNA MER1_type 0 210 46 7527 28 5 0 chr20 2581873 2582811 -64085194 - L1PA5 LINE L1 -1362 4784 3842 7100 39 8 1 chr20 2582811 2584183 -64083822 + L1PA5 LINE L1 4777 6154 0 2108 112 49 3 chr20 2584485 2584772 -64083233 - AluSx SINE Alu -12 300 1 497 143 74 175 chr20 2585075 2585264 -64082741 - MER69A DNA AcHobo -7 170 1 572 139 35 26 chr20 2585439 2585554 -64082451 - AluSg/x SINE Alu -12 298 183 240 219 319 8 chr20 2585783 2585902 -64082103 - MIR SINE MIR -60 202 47 2320 91 0 3 chr20 2585926 2586224 -64081781 + AluSx SINE Alu 4 300 -12 364 208 0 0 chr20 2586448 2586520 -64081485 - AluJo SINE Alu -114 188 117 915 121 0 8 chr20 2586539 2586671 -64081334 - AluSq/x SINE Alu -182 131 1 206 244 0 0 chr20 2586712 2586753 -64081252 + (TATATG)n Simple_repeat Simple_repeat 3 43 0 1905 137 13 19 chr20 2588155 2588469 -64079536 + AluJo SINE Alu 1 312 0 244 85 43 0 chr20 2589917 2589964 -64078041 - LTR66 LTR ERVL -171 439 391 537 191 9 0 chr20 2590597 2590702 -64077303 - MER5A DNA MER1_type -80 109 4 248 239 11 67 chr20 2591844 2592024 -64075981 + C-rich Low_complexity Low_complexity 2 171 0 252 0 0 0 chr20 2592030 2592058 -64075947 + (CGG)n Simple_repeat Simple_repeat 3 30 0 206 233 44 25 chr20 2592090 2592249 -64075756 + (CGG)n Simple_repeat Simple_repeat 3 164 0 222 118 0 0 chr20 2592307 2592341 -64075664 + (CCG)n Simple_repeat Simple_repeat 1 34 0 189 0 0 0 chr20 2592399 2592420 -64075585 + (CGGG)n Simple_repeat Simple_repeat 4 24 0 25 0 0 0 chr20 2592443 2592468 -64075537 + GC_rich Low_complexity Low_complexity 1 25 0 280 216 45 23 chr20 2594190 2594278 -64073727 - L1ME4a LINE L1 -67 6054 5965 2117 141 0 0 chr20 2595415 2595737 -64072268 + AluSx SINE Alu 1 322 0 2792 33 0 0 chr20 2596489 2596795 -64071210 + AluY SINE Alu 1 306 -5 1517 207 80 13 chr20 2599191 2599568 -64068437 + LTR16C LTR ERVL 90 491 0 2086 128 21 0 chr20 2601377 2601667 -64066338 + AluJo SINE Alu 1 296 -16 1734 161 70 3 chr20 2602219 2602505 -64065500 + AluJb SINE Alu 1 305 -7 1159 142 0 0 chr20 2602514 2602669 -64065336 + FRAM SINE Alu 1 154 -22 870 191 9 3 chr20 2602678 2602899 -64065106 + AluJb SINE Alu 2 293 -19 2481 196 22 12 chr20 2602959 2603464 -64064541 - MLT1F LTR MaLR -32 510 1 477 0 0 0 chr20 2605011 2605064 -64062941 + (CA)n Simple_repeat Simple_repeat 1 53 0 492 245 108 72 chr20 2605826 2606075 -64061930 - LTR16A1 LTR ERVL -176 281 24 993 146 0 19 chr20 2607816 2607974 -64060031 + FRAM SINE Alu 18 172 -4 358 281 89 0 chr20 2607982 2608128 -64059877 + L1ME3A LINE L1 5945 6103 -67 2199 130 0 3 chr20 2608129 2608428 -64059577 + AluSx SINE Alu 1 298 -14 209 170 0 43 chr20 2608750 2608797 -64059208 + CT-rich Low_complexity Low_complexity 2 46 0 244 220 0 17 chr20 2609101 2609160 -64058845 + GA-rich Low_complexity Low_complexity 3 60 0 1788 178 0 4 chr20 2609400 2609675 -64058330 - AluJb SINE Alu -38 274 1 1123 257 81 66 chr20 2609845 2610085 -64057920 - L1MC4a LINE L1 -1633 6175 5940 1930 150 0 21 chr20 2610085 2610406 -64057599 + AluJb SINE Alu 1 315 0 1123 257 81 66 chr20 2610406 2610843 -64057162 - L1MC4a LINE L1 -1868 5940 5485 6312 250 132 25 chr20 2610845 2613328 -64054677 - L2 LINE L2 -1 3312 566 455 216 82 30 chr20 2613364 2613498 -64054507 - L1MC4a LINE L1 -2353 5455 5315 384 152 0 0 chr20 2613502 2613568 -64054437 + CT-rich Low_complexity Low_complexity 2 67 0 2050 141 10 0 chr20 2613568 2613873 -64054132 - AluJo SINE Alu 0 312 5 22 56 0 0 chr20 2614214 2614250 -64053755 + AT_rich Low_complexity Low_complexity 1 36 0 990 251 172 27 chr20 2614457 2614968 -64053037 - L1ME2 LINE L1 -209 6024 5440 2203 106 0 0 chr20 2614968 2615274 -64052731 - AluSx SINE Alu 0 306 1 981 191 12 6 chr20 2615293 2615466 -64052539 + AluJb SINE Alu 129 302 -10 2480 70 0 7 chr20 2615471 2615772 -64052233 + AluSp SINE Alu 2 300 -13 882 287 83 36 chr20 2615788 2616376 -64051629 - L1ME2 LINE L1 -1074 5141 4526 616 242 104 90 chr20 2616412 2616747 -64051258 - L2 LINE L2 0 3313 2974 438 256 175 3 chr20 2616751 2617036 -64050969 - L1ME2 LINE L1 -1723 4492 4159 2491 87 0 0 chr20 2617036 2617334 -64050671 - AluSg SINE Alu -12 298 1 4494 235 50 22 chr20 2617338 2618311 -64049694 - L1ME2 LINE L1 -2309 3906 2881 1973 169 0 0 chr20 2618311 2618485 -64049520 - AluJb SINE Alu -5 307 131 2271 112 6 10 chr20 2618485 2618798 -64049207 - AluSx SINE Alu 0 312 1 1973 169 0 0 chr20 2618798 2618930 -64049075 - AluJb SINE Alu -180 132 1 4494 235 50 22 chr20 2618930 2619351 -64048654 - L1ME2 LINE L1 -3334 2881 2473 1788 83 9 4 chr20 2619392 2619621 -64048384 - AluSq SINE Alu -83 230 1 3850 247 100 89 chr20 2619627 2620686 -64047319 - L1ME2 LINE L1 -4205 2191 1145 2378 95 0 0 chr20 2620686 2620980 -64047025 - AluSx SINE Alu -18 294 1 3850 247 100 89 chr20 2620980 2621283 -64046722 - L1ME2 LINE L1 -5251 1145 847 766 178 0 15 chr20 2621283 2621418 -64046587 - FLAM_A SINE Alu -2 140 8 3850 247 100 89 chr20 2621418 2621997 -64046008 - L1ME2 LINE L1 -5549 847 88 189 0 0 0 chr20 2621997 2622018 -64045987 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3850 247 100 89 chr20 2622018 2622071 -64045934 - L1ME2 LINE L1 -6308 88 37 256 233 14 0 chr20 2622065 2622138 -64045867 - L1MEd LINE L1 -3267 2862 2789 * 390 285 88 45 chr20 2622146 2622564 -64045441 - L1MEd LINE L1 -3475 2654 2209 2706 35 3 0 chr20 2622564 2622874 -64045131 - AluY SINE Alu 0 311 1 390 285 88 45 chr20 2622874 2622968 -64045037 - L1MEd LINE L1 -3920 2209 2120 233 194 42 0 chr20 2622970 2623042 -64044963 - L1MA9 LINE L1 0 6312 6238 375 284 42 102 chr20 2623048 2623284 -64044721 - L1MEd LINE L1 -4170 2140 1919 851 240 43 34 chr20 2623292 2623500 -64044505 - MER63A DNA MER1_type 0 210 1 24 32 0 0 chr20 2623559 2623590 -64044415 + AT_rich Low_complexity Low_complexity 1 31 0 1056 273 67 52 chr20 2623646 2623849 -64044156 - L1MEd LINE L1 -4652 1658 1460 1918 172 3 0 chr20 2623849 2624146 -64043859 + AluJo SINE Alu 2 299 -13 1056 273 67 52 chr20 2624146 2624976 -64043029 - L1MEd LINE L1 -4850 1460 557 342 358 33 33 chr20 2625245 2625460 -64042545 - L1M4 LINE L1 -1146 5000 4786 402 138 0 0 chr20 2625481 2625539 -64042466 + AluJ/FLAM SINE Alu 2 59 -253 1373 217 4 14 chr20 2625544 2625821 -64042184 + AluJo SINE Alu 24 297 -15 4120 145 50 80 chr20 2625995 2626563 -64041442 - L1MB2 LINE L1 0 6171 5645 1173 187 20 49 chr20 2626563 2626809 -64041196 + MER8 DNA MER2_type 1 239 0 4120 145 50 80 chr20 2626809 2627267 -64040738 - L1MB2 LINE L1 -526 5645 5175 1275 200 118 52 chr20 2627969 2628434 -64039571 + Charlie4a DNA MER1_type 13 508 0 377 216 220 52 chr20 2629034 2629284 -64038721 - LTR16A1 LTR ERVL -16 441 150 1184 234 106 14 chr20 2629350 2629773 -64038232 - MLT1C LTR MaLR 0 467 6 2320 110 0 0 chr20 2630121 2630422 -64037583 - AluSc SINE Alu -8 301 1 303 228 179 14 chr20 2630444 2630589 -64037416 - MLT1J2 LTR MaLR 0 450 282 362 254 29 29 chr20 2630729 2630867 -64037138 - MLT1J LTR MaLR -369 142 5 1519 197 48 65 chr20 2631208 2631327 -64036678 - L1M4 LINE L1 -3565 3079 2959 1732 167 0 63 chr20 2631327 2631645 -64036360 - AluJb SINE Alu -12 300 3 1519 197 48 65 chr20 2631645 2632058 -64035947 - L1M4 LINE L1 -3685 2959 2596 255 182 18 18 chr20 2632056 2632111 -64035894 - L1MC1 LINE L1 -49 6284 6230 * 6298 211 29 53 chr20 2632101 2632943 -64035062 - L1M4 LINE L1 -4478 2168 1308 1351 108 80 0 chr20 2632943 2633156 -64034849 + MER30 DNA MER1_type 1 230 0 6298 211 29 53 chr20 2633156 2633352 -64034653 - L1M4 LINE L1 -5338 1308 1109 1966 152 3 3 chr20 2633352 2633642 -64034363 + AluJb SINE Alu 2 291 -21 6298 211 29 53 chr20 2633642 2634801 -64033204 - L1M4 LINE L1 -5537 1109 16 201 280 27 27 chr20 2634857 2634932 -64033073 - L3 LINE CR1 -780 797 723 * 288 290 46 53 chr20 2634929 2635060 -64032945 - L2 LINE L2 -27 3245 3116 784 202 101 5 chr20 2635161 2635349 -64032656 + MER3 DNA MER1_type 4 209 0 2662 45 0 6 chr20 2636193 2636504 -64031501 + AluY SINE Alu 1 309 -2 300 269 45 74 chr20 2636614 2636830 -64031175 + MIR SINE MIR 27 234 -28 2168 103 24 3 chr20 2636914 2637206 -64030799 + AluSx SINE Alu 1 298 -14 218 255 20 0 chr20 2638784 2638835 -64029170 + L2 LINE L2 3262 3313 0 746 160 0 89 chr20 2639192 2639256 -64028749 - MER3 DNA MER1_type 0 209 141 2345 92 0 0 chr20 2639256 2639548 -64028457 + AluSx SINE Alu 1 292 -20 746 160 0 89 chr20 2639548 2639652 -64028353 - MER3 DNA MER1_type -68 141 56 929 170 251 12 chr20 2639866 2640189 -64027816 - LTR16A1 LTR ERVL -2 455 56 1948 150 3 7 chr20 2640254 2640547 -64027458 + AluJb SINE Alu 1 292 -20 235 294 78 20 chr20 2641398 2641500 -64026505 + MIR SINE MIR 45 152 -56 209 250 0 0 chr20 2642374 2642418 -64025587 + L2 LINE L2 3044 3087 -185 586 218 16 171 chr20 2642656 2642977 -64025028 - LTR37B LTR ERV1 0 468 198 280 227 147 0 chr20 2643037 2643112 -64024893 - L1MA4A LINE L1 -28 6275 6190 644 207 42 11 chr20 2643116 2643293 -64024712 - L1MA4A LINE L1 -181 6122 5951 1548 74 0 0 chr20 2643293 2643482 -64024523 - AluSq SINE Alu 0 313 125 644 207 42 11 chr20 2643482 2643517 -64024488 - L1MA4A LINE L1 -352 5951 5919 242 133 173 40 chr20 2643539 2643614 -64024391 - LTR37B LTR ERV1 -270 198 114 2077 164 0 0 chr20 2643705 2644017 -64023988 - AluSx SINE Alu 0 312 1 1386 158 75 7 chr20 2644018 2644297 -64023708 - MER33 DNA MER1_type -26 298 1 656 204 118 13 chr20 2644305 2644457 -64023548 - MER5A DNA MER1_type 0 189 22 1769 111 51 63 chr20 2646236 2646552 -64021453 + AluSx SINE Alu 1 312 0 24 32 0 0 chr20 2648751 2648782 -64019223 + GC_rich Low_complexity Low_complexity 1 31 0 180 111 0 0 chr20 2650248 2650275 -64017730 + (GGAGAA)n Simple_repeat Simple_repeat 6 32 0 188 194 129 32 chr20 2650666 2650728 -64017277 + L2 LINE L2 3245 3312 -1 180 0 0 0 chr20 2651023 2651043 -64016962 + (CGGGG)n Simple_repeat Simple_repeat 5 24 0 27 81 0 0 chr20 2651235 2651297 -64016708 + GC_rich Low_complexity Low_complexity 1 62 0 24 103 0 0 chr20 2651471 2651558 -64016447 + GC_rich Low_complexity Low_complexity 1 87 0 185 314 0 0 chr20 2652683 2652734 -64015271 - L2 LINE L2 -8 3264 3214 186 195 13 143 chr20 2655472 2655549 -64012456 - MIR3 SINE MIR -28 180 114 184 266 0 78 chr20 2655829 2655893 -64012112 + L2 LINE L2 3255 3313 0 279 256 156 0 chr20 2656065 2656155 -64011850 + MER103 DNA DNA 61 164 -2 983 204 107 89 chr20 2656866 2656890 -64011115 - LTR37B LTR ERV1 -15 453 431 1863 151 0 31 chr20 2656890 2657206 -64010799 + AluJb SINE Alu 1 307 0 983 204 107 89 chr20 2657206 2657619 -64010386 - LTR37B LTR ERV1 -37 431 6 1506 212 35 32 chr20 2660564 2660937 -64007068 + MLT1A2 LTR MaLR 1 374 0 1494 263 26 35 chr20 2661703 2662167 -64005838 - LTR16C LTR ERVL 0 491 32 628 112 10 10 chr20 2662793 2662891 -64005114 + FLAM_A SINE Alu 31 128 -14 526 240 16 0 chr20 2662891 2663016 -64004989 + L1M4 LINE L1 4912 5038 -1108 270 0 0 0 chr20 2663526 2663556 -64004449 + (TG)n Simple_repeat Simple_repeat 2 31 0 1575 122 110 28 chr20 2663556 2663810 -64004195 - AluJo SINE Alu -34 278 4 2111 131 10 13 chr20 2663836 2664149 -64003856 - AluJb SINE Alu 0 312 1 2080 107 28 31 chr20 2664302 2664591 -64003414 + AluSx SINE Alu 2 289 -23 28 29 0 0 chr20 2664598 2664633 -64003372 + AT_rich Low_complexity Low_complexity 1 35 0 1116 254 43 15 chr20 2664633 2665027 -64002978 - L1M4 LINE L1 -1056 5090 4686 875 175 0 0 chr20 2665027 2665170 -64002835 - FLAM_C SINE Alu 0 143 1 2007 242 104 19 chr20 2665172 2665269 -64002736 - L1M4 LINE L1 -1433 4713 4626 1727 134 4 4 chr20 2665269 2665522 -64002483 + AluSx SINE Alu 51 303 -9 2007 242 104 19 chr20 2665522 2666243 -64001762 - L1M4 LINE L1 -1520 4626 3826 1863 120 4 0 chr20 2666304 2666554 -64001451 - AluSx SINE Alu -61 251 1 2047 137 10 3 chr20 2668177 2668470 -63999535 - AluJo SINE Alu -17 295 1 973 252 114 26 chr20 2668507 2668927 -63999078 - LTR16A1 LTR ERVL 0 457 1 2229 88 0 7 chr20 2669463 2669793 -63998212 + AluSx SINE Alu 1 328 0 3460 188 67 175 chr20 2670104 2670191 -63997814 + L1MD2 LINE L1 5 100 -6440 1680 140 63 14 chr20 2670191 2670477 -63997528 + AluJo SINE Alu 11 310 -2 3460 188 67 175 chr20 2670477 2671409 -63996596 + L1MD2 LINE L1 100 1131 -5409 1122 129 0 35 chr20 2671409 2671579 -63996426 - FRAM SINE Alu -15 161 1 3460 188 67 175 chr20 2671579 2671640 -63996365 + L1MD2 LINE L1 1131 1197 -5343 2503 70 3 0 chr20 2671640 2671939 -63996066 + AluSp SINE Alu 1 300 -13 3460 188 67 175 chr20 2671939 2672429 -63995576 + L1MD2 LINE L1 1197 1551 -4989 1990 181 3 0 chr20 2672429 2672738 -63995267 + AluJb SINE Alu 1 310 -2 3460 188 67 175 chr20 2672738 2672779 -63995226 + L1MD2 LINE L1 1551 1595 -4945 2377 95 7 0 chr20 2672849 2673154 -63994851 - AluSc SINE Alu -2 307 1 1956 164 7 0 chr20 2673158 2673457 -63994548 - AluJo SINE Alu -11 301 1 1734 129 126 0 chr20 2673691 2673977 -63994028 - AluSx SINE Alu 0 318 1 241 220 40 0 chr20 2674108 2674158 -63993847 - MER91 DNA MER1_type -12 178 127 1703 309 40 6 chr20 2674238 2674743 -63993262 - HERV16 LTR ERVL -1925 3071 2550 1628 230 25 77 chr20 2674755 2675240 -63992765 + L1MD2 LINE L1 4250 4759 -1781 1775 167 10 10 chr20 2675240 2675540 -63992465 + AluJo SINE Alu 1 300 -12 1628 230 25 77 chr20 2675540 2675660 -63992345 + L1MD2 LINE L1 4759 4884 -1656 1775 171 42 36 chr20 2675660 2675880 -63992125 - MLT1B LTR MaLR 0 390 166 2223 109 7 0 chr20 2675880 2676174 -63991831 - AluSx SINE Alu -11 301 6 1775 171 42 36 chr20 2676174 2676339 -63991666 - MLT1B LTR MaLR -224 166 3 1628 230 25 77 chr20 2676339 2676508 -63991497 + L1MD2 LINE L1 4884 4928 -1612 2176 109 7 0 chr20 2676508 2676823 -63991182 - AluSg SINE Alu 0 317 1 1628 230 25 77 chr20 2676823 2677008 -63990997 + L1MD2 LINE L1 4928 5121 -1419 2366 109 0 0 chr20 2677047 2677349 -63990656 - AluSx SINE Alu -10 302 1 4683 159 28 57 chr20 2677359 2677404 -63990601 - L1MB4 LINE L1 -2 6178 6133 701 200 0 15 chr20 2677404 2677539 -63990466 - FLAM_A SINE Alu 0 133 1 4683 159 28 57 chr20 2677539 2678179 -63989826 - L1MB4 LINE L1 -47 6133 5476 2119 140 7 0 chr20 2678179 2678487 -63989518 - AluSx SINE Alu -2 310 1 4683 159 28 57 chr20 2678487 2678666 -63989339 - L1MB4 LINE L1 -704 5476 5293 2432 35 35 7 chr20 2678666 2678953 -63989052 + AluY SINE Alu 1 295 -16 4683 159 28 57 chr20 2678953 2679353 -63988652 - L1MB4 LINE L1 -887 5293 4924 1860 212 32 4 chr20 2679339 2679806 -63988199 + L1MD2 LINE L1 5113 5592 -948 * 3651 188 61 42 chr20 2680463 2681457 -63986548 + L1MD2 LINE L1 5583 6545 -208 237 292 0 0 chr20 2681506 2681571 -63986434 + L1MD3 LINE L1 7798 7862 -133 1214 129 40 49 chr20 2681574 2681648 -63986357 - MLT1B LTR MaLR 0 390 317 2205 125 0 0 chr20 2681648 2681943 -63986062 + AluSx SINE Alu 2 296 -16 1214 129 40 49 chr20 2681943 2682093 -63985912 - MLT1B LTR MaLR -73 317 168 707 185 37 0 chr20 2682094 2682229 -63985776 - FLAM_C SINE Alu -2 141 2 852 148 56 0 chr20 2682229 2682391 -63985614 - MLT1B LTR MaLR -216 174 4 411 207 86 9 chr20 2682392 2682508 -63985497 + L1MD2 LINE L1 6616 6740 -13 2177 121 14 3 chr20 2682508 2682805 -63985200 + AluSx SINE Alu 1 300 -12 2528 70 3 0 chr20 2682807 2683107 -63984898 + AluSp SINE Alu 3 303 -10 2433 210 85 2 chr20 2683108 2683698 -63984307 + L1ME1 LINE L1 5312 5950 -216 869 233 65 71 chr20 2683693 2683819 -63984186 - L1M4c LINE L1 -3921 2463 2338 * 2272 125 0 0 chr20 2683819 2684130 -63983875 - AluJb SINE Alu -1 311 1 869 233 65 71 chr20 2684130 2684191 -63983814 - L1M4c LINE L1 -4046 2338 2278 2413 68 0 0 chr20 2684191 2684511 -63983494 - AluSc SINE Alu 0 320 1 869 233 65 71 chr20 2684511 2684887 -63983118 - L1M4c LINE L1 -4106 2278 2025 486 151 41 27 chr20 2684898 2685044 -63982961 - L1MB8 LINE L1 0 6178 6031 601 226 0 0 chr20 2685054 2685169 -63982836 + AluJo SINE Alu 1 115 -187 931 129 57 0 chr20 2685169 2685309 -63982696 + AluJo SINE Alu 162 309 -3 922 175 5 47 chr20 2685317 2685528 -63982477 - L1MB5 LINE L1 -154 6020 5819 2203 133 0 16 chr20 2685529 2685845 -63982160 - AluSx SINE Alu -1 311 1 1164 197 21 45 chr20 2685845 2686134 -63981871 - L1M4c LINE L1 -4728 1656 1375 571 209 67 52 chr20 2686134 2686238 -63981767 + L1ME1 LINE L1 5936 6037 -129 2416 78 0 0 chr20 2686238 2686534 -63981471 - AluY SINE Alu -15 296 1 571 209 67 52 chr20 2686534 2686639 -63981366 + L1ME1 LINE L1 6037 6148 -18 1976 91 65 18 chr20 2686669 2686945 -63981060 - AluSc SINE Alu -20 289 1 1902 133 16 42 chr20 2687000 2687308 -63980697 - AluSp SINE Alu -12 301 2 574 262 47 92 chr20 2687324 2687479 -63980526 - L1ME3A LINE L1 -80 6090 5930 1783 182 0 19 chr20 2687479 2687797 -63980208 - AluJo SINE Alu 0 312 1 574 262 47 92 chr20 2687797 2687983 -63980022 - L1ME3A LINE L1 -240 5930 5773 1843 173 7 10 chr20 2687983 2688290 -63979715 - AluJb SINE Alu -6 306 1 574 262 47 92 chr20 2688290 2688416 -63979589 - L1ME3A LINE L1 -397 5773 5643 246 211 32 32 chr20 2688844 2688939 -63979066 - L1ME3A LINE L1 -914 5386 5292 * 519 279 50 84 chr20 2688928 2689027 -63978978 - L1MEd LINE L1 -4862 1257 1156 2024 157 0 13 chr20 2689027 2689332 -63978673 + AluJb SINE Alu 1 301 -11 519 279 50 84 chr20 2689332 2689347 -63978658 - L1MEd LINE L1 -4963 1156 1142 1888 137 42 0 chr20 2689347 2689632 -63978373 + AluJo SINE Alu 9 305 -7 519 279 50 84 chr20 2689632 2689884 -63978121 - L1MEd LINE L1 -4977 1142 883 183 114 0 0 chr20 2689884 2689919 -63978086 + (TA)n Simple_repeat Simple_repeat 2 36 0 1884 107 95 4 chr20 2689919 2690182 -63977823 - AluSx SINE Alu -25 287 1 519 279 50 84 chr20 2690182 2690347 -63977658 - L1MEd LINE L1 -5234 885 741 1997 102 65 0 chr20 2690585 2690860 -63977145 + AluSx SINE Alu 1 293 -19 180 0 0 0 chr20 2690860 2690880 -63977125 + (GGAA)n Simple_repeat Simple_repeat 3 22 0 476 232 21 49 chr20 2691288 2691430 -63976575 + LTR67 LTR ERVL 410 547 -10 769 244 34 21 chr20 2691509 2691743 -63976262 + L1ME3A LINE L1 5934 6170 0 313 291 30 61 chr20 2691942 2692107 -63975898 + LTR33A LTR ERVL 1 160 -363 1421 135 54 58 chr20 2692300 2692560 -63975445 - AluJb SINE Alu -53 259 1 365 235 20 10 chr20 2692565 2692667 -63975338 + LTR33A LTR ERVL 421 523 0 221 321 55 41 chr20 2698421 2698639 -63969366 + L2 LINE L2 2909 3129 -143 439 257 0 11 chr20 2699298 2699477 -63968528 + (TG)n Simple_repeat Simple_repeat 1 177 0 224 265 0 15 chr20 2699478 2699546 -63968459 + (CGTG)n Simple_repeat Simple_repeat 1 67 0 2364 157 105 0 chr20 2700101 2700560 -63967445 + MER84 LTR ERV1 1 507 0 2445 110 44 10 chr20 2700560 2700950 -63967055 + MER84-int LTR ERV1 1 403 -4551 906 141 17 57 chr20 2700922 2701099 -63966906 + MER84-int LTR ERV1 598 767 -4187 * 557 153 207 0 chr20 2701100 2701211 -63966794 + AluSp SINE Alu 2 135 -178 2063 107 0 61 chr20 2701211 2701539 -63966466 + AluSx SINE Alu 1 308 -4 6033 116 15 31 chr20 2701545 2702443 -63965562 + MER84-int LTR ERV1 755 1638 -3316 2101 106 29 0 chr20 2702443 2702744 -63965261 + AluSp SINE Alu 1 309 0 6033 116 15 31 chr20 2702744 2702835 -63965170 + MER84-int LTR ERV1 1638 1729 -3225 1099 138 6 29 chr20 2702838 2703012 -63964993 + AluSx SINE Alu 1 170 -142 2430 79 50 6 chr20 2703015 2703357 -63964648 + MER84-int LTR ERV1 4598 4954 0 2221 139 153 14 chr20 2703357 2703802 -63964203 + MER84 LTR ERV1 1 507 0 247 261 15 0 chr20 2703904 2703969 -63964036 - MIR SINE MIR -62 146 81 210 178 0 22 chr20 2704213 2704258 -63963747 + CT-rich Low_complexity Low_complexity 5 48 0 422 293 137 32 chr20 2705359 2705796 -63962209 + L2 LINE L2 2827 3309 -4 2427 88 3 0 chr20 2705973 2706279 -63961726 - AluY SINE Alu -4 307 1 448 262 54 30 chr20 2706739 2706907 -63961098 + MIR SINE MIR 29 200 -62 385 173 83 149 chr20 2707277 2707347 -63960658 + MER5A DNA MER1_type 4 77 -112 2199 91 9 61 chr20 2707347 2707676 -63960329 + AluSx SINE Alu 1 312 0 385 173 83 149 chr20 2707676 2707736 -63960269 + MER5A DNA MER1_type 77 123 -66 1792 95 13 0 chr20 2707736 2707968 -63960037 - AluSg/x SINE Alu -9 301 67 385 173 83 149 chr20 2707968 2708004 -63960001 + MER5A DNA MER1_type 123 160 -29 1020 171 40 72 chr20 2708233 2708278 -63959727 - AluJo SINE Alu -11 301 256 4467 54 3 17 chr20 2708278 2708613 -63959392 - LTR14C LTR ERVK 0 587 262 2508 59 0 7 chr20 2708613 2708919 -63959086 + AluY SINE Alu 1 304 -7 4467 54 3 17 chr20 2708919 2709178 -63958827 - LTR14C LTR ERVK -325 262 1 1020 171 40 72 chr20 2709178 2709305 -63958700 - AluJo SINE Alu -56 256 135 2426 84 3 7 chr20 2709305 2709614 -63958391 - AluSc SINE Alu -1 308 1 1020 171 40 72 chr20 2709614 2709662 -63958343 - AluJo SINE Alu -177 135 87 3529 120 22 25 chr20 2709677 2709903 -63958102 - L1PB3 LINE L1 -2 6152 5927 2439 74 7 7 chr20 2709903 2710213 -63957792 - AluY SINE Alu -1 310 1 3529 120 22 25 chr20 2710213 2710346 -63957659 - L1PB3 LINE L1 -227 5927 5795 369 0 0 0 chr20 2710346 2710387 -63957618 + (TG)n Simple_repeat Simple_repeat 1 41 0 3529 120 22 25 chr20 2710387 2710619 -63957386 - L1PB3 LINE L1 -359 5795 5562 2148 253 125 38 chr20 2710678 2710782 -63957223 - HAL1 LINE L1 -100 2407 2313 1960 155 16 7 chr20 2710782 2711086 -63956919 - AluSq SINE Alu 0 313 7 2148 253 125 38 chr20 2711086 2712029 -63955976 - HAL1 LINE L1 -194 2313 1269 2557 89 0 0 chr20 2712030 2712343 -63955662 + AluSq SINE Alu 1 313 0 404 183 0 0 chr20 2712348 2712419 -63955586 + LTR16A1 LTR ERVL 372 442 -15 1917 132 146 13 chr20 2712430 2712808 -63955197 + MSTA LTR MaLR 1 428 0 291 203 0 58 chr20 2712808 2712877 -63955128 + L2 LINE L2 3207 3271 -1 196 308 208 8 chr20 2716936 2717066 -63950939 + MIR SINE MIR 57 212 -50 310 330 0 9 chr20 2717919 2718025 -63949980 + MIR SINE MIR 48 152 -110 542 253 108 0 chr20 2718700 2718802 -63949203 + MER5A DNA MER1_type 9 135 -54 2339 104 7 0 chr20 2718802 2719101 -63948904 - AluSx SINE Alu -11 301 1 542 253 108 0 chr20 2719101 2719156 -63948849 + MER5A DNA MER1_type 135 183 -6 1250 43 10 34 chr20 2721655 2721862 -63946143 + SVA Other Other 665 866 -520 6637 79 13 47 chr20 2721886 2723085 -63944920 + SVA Other Other 431 1386 0 646 289 36 27 chr20 2723310 2723611 -63944394 - L1M4 LINE L1 -1993 4153 3850 * 936 234 98 8 chr20 2723580 2723641 -63944364 - L1MC2 LINE L1 -344 5818 5764 1833 160 0 45 chr20 2723641 2723953 -63944052 - AluSx SINE Alu -14 298 1 936 234 98 8 chr20 2723953 2724217 -63943788 - L1MC2 LINE L1 -398 5764 5547 5883 217 38 33 chr20 2724399 2725323 -63942682 + L1PA8 LINE L1 3811 4729 -1443 2387 92 0 16 chr20 2725323 2725627 -63942378 + AluSq SINE Alu 1 299 -14 5883 217 38 33 chr20 2725627 2727071 -63940934 + L1PA8 LINE L1 4729 6172 0 354 274 102 80 chr20 2727059 2727333 -63940672 + L1ME1 LINE L1 5885 6164 -2 * 1555 183 3 74 chr20 2727335 2727658 -63940347 - AluJo SINE Alu -12 300 1 2249 80 3 14 chr20 2727664 2727980 -63940025 - AluY SINE Alu 0 313 1 2200 119 0 0 chr20 2728156 2728475 -63939530 - AluSq SINE Alu 0 319 1 1303 126 0 88 chr20 2728478 2728717 -63939288 - AluSg/x SINE Alu -10 302 85 749 179 14 7 chr20 2728719 2728836 -63939169 - AluSg/x SINE Alu -59 251 131 1997 120 62 3 chr20 2728836 2729128 -63938877 - AluSq SINE Alu -4 309 1 749 179 14 7 chr20 2729128 2729150 -63938855 - AluSg/x SINE Alu -179 131 111 2524 69 3 3 chr20 2729643 2729948 -63938057 - AluY SINE Alu -6 305 1 1626 173 14 21 chr20 2730136 2730420 -63937585 + AluJb SINE Alu 1 282 -30 359 281 37 55 chr20 2730450 2730614 -63937391 + L1MCa LINE L1 1938 2098 -4328 652 222 0 28 chr20 2730995 2731139 -63936866 + FLAM_C SINE Alu 2 141 -2 1971 108 79 0 chr20 2731918 2732195 -63935810 + AluSc SINE Alu 1 299 -10 219 235 39 0 chr20 2732236 2732287 -63935718 - L2 LINE L2 -5 3267 3215 210 364 10 10 chr20 2733458 2733557 -63934448 + G-rich Low_complexity Low_complexity 3 101 0 198 183 83 83 chr20 2734695 2734755 -63933250 - L2 LINE L2 -7 3306 3247 181 362 121 17 chr20 2738653 2738827 -63929178 + L2 LINE L2 2693 2884 -430 2047 120 21 3 chr20 2739090 2739381 -63928624 - AluSx SINE Alu -16 296 1 795 196 18 0 chr20 2739482 2739650 -63928355 + FAM SINE Alu 1 171 -4 2031 125 33 0 chr20 2739660 2739932 -63928073 + AluSx SINE Alu 1 281 -31 345 326 0 0 chr20 2739948 2740037 -63927968 + L1MC4 LINE L1 6614 6702 -1340 314 346 0 9 chr20 2739971 2740078 -63927927 - L1MC4 LINE L1 -1323 6719 6614 * 294 231 0 0 chr20 2740088 2740231 -63927774 + (TAGA)n Simple_repeat Simple_repeat 4 146 0 2447 102 0 0 chr20 2740478 2740783 -63927222 + AluSg SINE Alu 1 305 -5 764 222 111 34 chr20 2741230 2741437 -63926568 - MIR SINE MIR -8 254 32 492 335 119 36 chr20 2742008 2742334 -63925671 - L2 LINE L2 -216 3056 2759 324 0 0 0 chr20 2742334 2742370 -63925635 + (TG)n Simple_repeat Simple_repeat 2 37 0 492 335 119 36 chr20 2742370 2742720 -63925285 - L2 LINE L2 -513 2759 2315 321 217 0 0 chr20 2742857 2742924 -63925081 + FRAM/FAM SINE Alu 1 49 -117 3323 136 45 41 chr20 2742937 2743439 -63924566 - L1MB2 LINE L1 -7 6164 5657 2541 82 0 0 chr20 2743439 2743743 -63924262 - AluSx SINE Alu -8 304 1 3323 136 45 41 chr20 2743743 2743880 -63924125 - L1MB2 LINE L1 -514 5657 5522 229 367 64 56 chr20 2744670 2744808 -63923197 + L2 LINE L2 719 854 -2460 2411 95 0 0 chr20 2744808 2745103 -63922902 - AluSc SINE Alu -14 295 1 229 367 64 56 chr20 2745103 2745539 -63922466 + L2 LINE L2 854 1298 -2016 960 190 0 46 chr20 2745557 2745752 -63922253 - AluJb SINE Alu -1 311 126 1715 290 78 6 chr20 2745757 2746295 -63921710 - ERVL LTR ERVL -926 4838 4262 557 342 56 8 chr20 2746357 2746623 -63921382 - ERVL LTR ERVL -5042 722 444 2235 120 7 0 chr20 2746624 2746923 -63921082 - AluSp SINE Alu -10 303 3 257 226 215 57 chr20 2747306 2747366 -63920639 - LTR41 LTR ERVL 0 795 746 2172 117 0 7 chr20 2747366 2747673 -63920332 + AluSq SINE Alu 1 305 -8 2291 124 3 0 chr20 2747673 2747980 -63920025 + AluSc SINE Alu 1 308 -1 257 226 215 57 chr20 2747980 2748012 -63919993 - LTR41 LTR ERVL -49 746 720 1832 156 23 16 chr20 2748012 2748319 -63919686 + AluJb SINE Alu 1 309 -3 257 226 215 57 chr20 2748319 2748468 -63919537 - LTR41 LTR ERVL -75 720 510 1044 94 0 0 chr20 2748653 2748781 -63919224 + AluSp SINE Alu 1 128 -185 1806 88 4 0 chr20 2748782 2749008 -63918997 + AluSq SINE Alu 76 302 -11 2322 76 3 7 chr20 2749014 2749302 -63918703 + AluY SINE Alu 1 287 -24 776 164 61 18 chr20 2749583 2749748 -63918257 - LTR41 LTR ERVL -599 174 3 14495 110 40 41 chr20 2749868 2750435 -63917570 - Tigger1 DNA MER2_type 0 2418 1852 2062 129 7 0 chr20 2750435 2750745 -63917260 + AluSx SINE Alu 1 312 0 14495 110 40 41 chr20 2750745 2750991 -63917014 - Tigger1 DNA MER2_type -566 1852 1607 2266 104 0 0 chr20 2750991 2751299 -63916706 - AluSx SINE Alu -4 308 1 14495 110 40 41 chr20 2751299 2751453 -63916552 - Tigger1 DNA MER2_type -811 1607 1454 1208 189 47 47 chr20 2751453 2751565 -63916440 + AluJo SINE Alu 1 112 -200 243 0 0 0 chr20 2751565 2751592 -63916413 + (CA)n Simple_repeat Simple_repeat 2 28 0 1208 189 47 47 chr20 2751592 2751808 -63916197 + AluJo SINE Alu 111 312 0 14495 110 40 41 chr20 2751808 2751838 -63916167 - Tigger1 DNA MER2_type -964 1454 1425 2239 112 0 6 chr20 2751838 2752152 -63915853 + AluSx SINE Alu 1 312 0 14495 110 40 41 chr20 2752152 2752287 -63915718 - Tigger1 DNA MER2_type -993 1425 1291 2199 98 3 0 chr20 2752287 2752584 -63915421 - AluSg SINE Alu -12 298 1 14495 110 40 41 chr20 2752584 2753867 -63914138 - Tigger1 DNA MER2_type -1127 1291 1 316 247 66 125 chr20 2754083 2754292 -63913713 - L1M4 LINE L1 -1290 4856 4671 2211 106 3 0 chr20 2754292 2754603 -63913402 - AluSx SINE Alu 0 312 1 316 247 66 125 chr20 2754603 2754713 -63913292 - L1M4 LINE L1 -1475 4671 4556 1266 100 0 17 chr20 2754829 2755009 -63912996 - AluSg/x SINE Alu -8 302 126 1707 126 4 15 chr20 2755011 2755301 -63912704 - AluSq SINE Alu 0 313 36 274 224 96 91 chr20 2755344 2755427 -63912578 - L1P LINE L1 -1809 4337 4256 1707 152 0 40 chr20 2755427 2755723 -63912282 - AluJb SINE Alu -18 294 11 274 224 96 91 chr20 2755723 2755871 -63912134 - L1P LINE L1 -1890 4256 4105 1511 181 36 0 chr20 2756343 2756624 -63911381 + AluJo SINE Alu 1 291 -21 214 220 68 0 chr20 2757141 2757200 -63910805 + L2 LINE L2 64 126 -3188 2211 98 3 0 chr20 2760808 2761104 -63906901 + AluSx SINE Alu 2 298 -14 241 169 34 0 chr20 2761131 2761190 -63906815 + GA-rich Low_complexity Low_complexity 4 64 0 367 236 185 38 chr20 2764339 2764496 -63903509 - MIR SINE MIR -37 225 46 915 235 135 28 chr20 2765191 2765593 -63902412 - MLT1G3 LTR MaLR -51 539 16 738 136 7 102 chr20 2765596 2765743 -63902262 - FLAM_C SINE Alu 0 133 1 270 0 0 0 chr20 2765899 2765929 -63902076 + (T)n Simple_repeat Simple_repeat 1 30 0 315 241 60 65 chr20 2766364 2766580 -63901425 - L1MC4 LINE L1 -2 8040 7826 337 217 25 0 chr20 2766613 2766702 -63901303 - L1ME2 LINE L1 0 6166 6073 1995 88 10 34 chr20 2766964 2767259 -63900746 + AluSq SINE Alu 1 288 -25 2346 70 3 3 chr20 2767367 2767669 -63900336 + AluSq SINE Alu 1 302 -11 466 249 169 21 chr20 2767726 2767915 -63900090 + L2 LINE L2 3095 3311 -2 223 178 22 16 chr20 2767916 2767978 -63900027 - MIR SINE MIR -68 140 89 206 152 0 0 chr20 2770444 2770477 -63897528 + MIR SINE MIR 117 149 -113 22 0 0 0 chr20 2770664 2770686 -63897319 + GC_rich Low_complexity Low_complexity 1 22 0 36 40 0 0 chr20 2770901 2770951 -63897054 + GC_rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr20 2771618 2771647 -63896358 + AT_rich Low_complexity Low_complexity 1 29 0 247 306 36 95 chr20 2771969 2772221 -63895784 + L2 LINE L2 2695 2931 -383 219 296 163 10 chr20 2772767 2772865 -63895140 - L2 LINE L2 -17 3255 3143 218 305 203 0 chr20 2772910 2773038 -63894967 - MIR SINE MIR 0 262 109 260 314 87 50 chr20 2773109 2773351 -63894654 - L2 LINE L2 -193 3079 2829 438 273 67 57 chr20 2773880 2774089 -63893916 - L1ME2 LINE L1 -2071 5737 5527 224 284 63 32 chr20 2774172 2774267 -63893738 - MIR3 SINE MIR -36 172 88 2029 106 7 0 chr20 2774523 2774837 -63893168 - AluSp SINE Alu 0 318 3 2420 70 0 0 chr20 2775151 2775449 -63892556 + AluSc SINE Alu 1 298 -11 1844 131 20 16 chr20 2775484 2775790 -63892215 - AluJb SINE Alu -5 307 1 247 265 211 31 chr20 2775807 2776030 -63891975 - L1ME LINE L1 -356 5765 5503 286 348 22 0 chr20 2776291 2776383 -63891622 - L2 LINE L2 -40 3273 3180 565 239 148 7 chr20 2776532 2776687 -63891318 - MER5A DNA MER1_type 0 189 13 726 203 16 60 chr20 2776777 2776903 -63891102 - MER5B DNA MER1_type -1 177 60 1929 168 24 0 chr20 2776903 2777243 -63890762 + MER7A DNA MER2_type 1 346 0 726 203 16 60 chr20 2777243 2777298 -63890707 - MER5B DNA MER1_type -118 60 4 400 261 50 37 chr20 2777315 2777476 -63890529 - L2 LINE L2 -473 2841 2679 1394 187 127 197 chr20 2777501 2778025 -63889980 + Charlie7 DNA MER1_type 38 597 -2015 1594 127 54 14 chr20 2778025 2778301 -63889704 + AluJo SINE Alu 7 293 -19 1997 114 0 17 chr20 2778307 2778604 -63889401 + AluSc SINE Alu 1 292 -17 1394 187 127 197 chr20 2778604 2778800 -63889205 + Charlie7 DNA MER1_type 602 810 -1802 927 207 0 0 chr20 2778800 2778979 -63889026 - AluJo SINE Alu -16 296 118 1394 187 127 197 chr20 2778979 2778999 -63889006 + Charlie7 DNA MER1_type 810 830 -1782 2104 120 10 0 chr20 2778999 2779307 -63888698 + AluSx SINE Alu 1 311 -1 1394 187 127 197 chr20 2779307 2779560 -63888445 + Charlie7 DNA MER1_type 830 1110 -1502 1616 159 23 29 chr20 2779560 2779869 -63888136 - AluJb SINE Alu 0 312 6 1394 187 127 197 chr20 2779869 2780069 -63887936 + Charlie7 DNA MER1_type 1110 1322 -1290 1197 117 0 22 chr20 2780256 2780436 -63887569 - AluJb SINE Alu -7 305 130 646 121 0 0 chr20 2780437 2780536 -63887469 + MER46A DNA MER2_type 138 236 0 408 139 28 65 chr20 2780537 2780645 -63887360 + Charlie7 DNA MER1_type 1695 1798 -814 2783 6 0 0 chr20 2780651 2780962 -63887043 + AluY SINE Alu 1 311 0 4505 147 42 50 chr20 2781021 2782001 -63886004 - L1MB7 LINE L1 -21 6163 5195 1182 175 79 32 chr20 2781994 2782076 -63885929 - L1M4 LINE L1 -486 5692 5615 * 2348 66 27 0 chr20 2782076 2782377 -63885628 - AluY SINE Alu 0 311 3 1182 175 79 32 chr20 2782377 2782574 -63885431 - L1M4 LINE L1 -563 5615 5400 256 118 79 13 chr20 2782592 2782668 -63885337 + Charlie7 DNA MER1_type 1890 1970 -642 265 200 0 0 chr20 2782694 2782744 -63885261 + L1MC5 LINE L1 7184 7233 -728 1186 226 52 65 chr20 2782943 2783062 -63884943 + L1MC5 LINE L1 7397 7516 -445 2161 93 17 0 chr20 2783062 2783352 -63884653 + AluSg SINE Alu 1 295 -15 1186 226 52 65 chr20 2783352 2783768 -63884237 + L1MC5 LINE L1 7516 7925 -36 583 234 255 50 chr20 2783792 2783841 -63884164 + Charlie7 DNA MER1_type 1970 2008 -604 2249 80 3 37 chr20 2783841 2784165 -63883840 + AluSp SINE Alu 1 313 0 583 234 255 50 chr20 2784165 2784640 -63883365 + Charlie7 DNA MER1_type 2008 2602 -10 1746 145 26 23 chr20 2785556 2785860 -63882145 + AluJo SINE Alu 1 305 -7 1572 162 3 46 chr20 2787173 2787475 -63880530 - AluJo SINE Alu -23 289 1 532 299 72 5 chr20 2787587 2787794 -63880211 + MIR SINE MIR 34 254 -8 356 328 184 25 chr20 2787972 2788677 -63879328 + L2 LINE L2 1983 2847 -467 1128 155 23 50 chr20 2788987 2789206 -63878799 + MER2 DNA MER2_type 1 213 -132 2164 118 0 0 chr20 2789286 2789592 -63878413 + AluSx SINE Alu 1 306 -6 2322 173 9 24 chr20 2789639 2790061 -63877944 + MER47B DNA MER2_type 2 417 -1 277 210 22 116 chr20 2790364 2790502 -63877503 + L2 LINE L2 3158 3282 -31 245 333 9 26 chr20 2791627 2791741 -63876264 - MER102b DNA MER1_type 0 341 230 794 182 8 0 chr20 2791753 2791885 -63876120 - FLAM_C SINE Alu 0 133 1 2328 60 0 10 chr20 2791983 2792284 -63875721 + AluY SINE Alu 1 298 -13 1904 122 3 28 chr20 2792351 2792662 -63875343 - AluSx SINE Alu 0 304 1 1745 129 3 44 chr20 2792788 2793107 -63874898 - AluSx SINE Alu 0 307 1 490 252 82 14 chr20 2793224 2793371 -63874634 - L1M4 LINE L1 -3213 2933 2777 2254 86 0 13 chr20 2793371 2793685 -63874320 + AluSx SINE Alu 1 310 -2 4267 177 50 111 chr20 2793765 2794659 -63873346 - L1MC4 LINE L1 -70 7972 7025 2166 114 0 0 chr20 2794659 2794966 -63873039 - AluSx SINE Alu -5 307 1 4267 177 50 111 chr20 2794966 2795182 -63872823 - L1MC4 LINE L1 -1017 7025 6797 2148 107 0 35 chr20 2795182 2795365 -63872640 - AluSq SINE Alu -5 308 139 2215 52 58 3 chr20 2795365 2795656 -63872349 - AluY SINE Alu -3 308 2 2148 107 0 35 chr20 2795656 2795791 -63872214 - AluSq SINE Alu -174 139 1 4267 177 50 111 chr20 2795791 2795853 -63872152 - L1MC4 LINE L1 -1245 6797 6888 2241 92 0 0 chr20 2795853 2796147 -63871858 + AluSx SINE Alu 1 294 -18 4267 177 50 111 chr20 2796147 2796327 -63871678 - L1MC4 LINE L1 -1153 6889 6700 927 120 0 63 chr20 2796345 2796503 -63871502 + AluSx SINE Alu 25 172 -140 554 239 90 21 chr20 2796549 2796737 -63871268 - MER74A LTR ERVL -5 553 353 341 318 0 16 chr20 2796955 2797084 -63870921 - L1MC4 LINE L1 -1378 6664 6538 1938 126 0 11 chr20 2797102 2797412 -63870593 + AluSx SINE Alu 1 307 0 700 165 85 73 chr20 2797425 2797589 -63870416 - FRAM SINE Alu 0 166 1 404 256 0 0 chr20 2797722 2797808 -63870197 + Tigger6 DNA MER2_type 1 86 -1511 2295 78 0 3 chr20 2797857 2798152 -63869853 + AluSq SINE Alu 5 298 -15 2051 97 4 0 chr20 2798241 2798548 -63869457 - AluSg SINE Alu 0 308 1 2087 120 3 0 chr20 2799163 2799464 -63868541 - AluSx SINE Alu -10 302 1 1011 228 53 22 chr20 2800193 2800321 -63867684 + MIR SINE MIR 25 165 -97 1396 119 38 38 chr20 2800321 2800557 -63867448 + MER46A DNA MER2_type 1 236 0 1011 228 53 22 chr20 2800557 2800656 -63867349 + MIR SINE MIR 165 259 -3 1732 191 3 7 chr20 2800684 2800982 -63867023 + AluJo SINE Alu 1 297 -15 1562 167 20 40 chr20 2801192 2801492 -63866513 - AluJo SINE Alu -18 294 1 2222 100 7 3 chr20 2801668 2801968 -63866037 + AluSc SINE Alu 1 301 -8 1818 158 42 36 chr20 2802227 2802562 -63865443 + MER1B DNA MER1_type 1 337 0 21 0 0 0 chr20 2802775 2802796 -63865209 + AT_rich Low_complexity Low_complexity 1 21 0 2170 108 30 3 chr20 2802967 2803264 -63864741 - AluSp SINE Alu -8 305 1 7024 178 69 69 chr20 2803699 2805554 -63862451 - Cheshire DNA MER1_type -20 2400 542 605 177 123 140 chr20 2805554 2805797 -63862208 - MER8 DNA MER2_type 0 239 1 7024 178 69 69 chr20 2805797 2805888 -63862117 - Cheshire DNA MER1_type -1878 542 453 918 124 0 36 chr20 2805889 2806026 -63861979 + FLAM_C SINE Alu 1 132 -11 233 213 148 0 chr20 2806038 2806099 -63861906 - Cheshire DNA MER1_type -1953 467 398 520 221 8 30 chr20 2806155 2806286 -63861719 - Cheshire DNA MER1_type -2002 418 291 181 256 77 0 chr20 2806396 2806435 -63861570 - L2 LINE L2 -18 3254 3213 651 209 9 0 chr20 2806459 2806590 -63861415 + AluJb SINE Alu 174 305 0 1983 117 50 3 chr20 2806590 2806888 -63861117 + AluSx SINE Alu 1 312 0 417 212 71 0 chr20 2806904 2807003 -63861002 - Cheshire DNA MER1_type -2184 236 131 512 108 54 6 chr20 2807007 2807174 -63860831 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 22 80 0 0 chr20 2807185 2807235 -63860770 + AT_rich Low_complexity Low_complexity 1 50 0 412 44 44 81 chr20 2807235 2807537 -63860468 + (TA)n Simple_repeat Simple_repeat 1 290 0 289 79 110 12 chr20 2807559 2807723 -63860282 + (TA)n Simple_repeat Simple_repeat 1 180 0 28 0 0 0 chr20 2807730 2807758 -63860247 + AT_rich Low_complexity Low_complexity 1 28 0 810 136 268 132 chr20 2807759 2807873 -63860132 - AluJo SINE Alu 0 302 205 2486 68 10 7 chr20 2807873 2808183 -63859822 - AluY SINE Alu 0 311 1 810 136 268 132 chr20 2808183 2808333 -63859672 - AluJo SINE Alu -97 205 2 25 51 0 0 chr20 2808373 2808412 -63859593 + AT_rich Low_complexity Low_complexity 1 39 0 1905 155 0 14 chr20 2809239 2809535 -63858470 + AluJb SINE Alu 1 292 -20 2004 136 0 13 chr20 2809616 2809924 -63858081 + AluJb SINE Alu 1 304 -8 234 220 20 0 chr20 2809977 2810027 -63857978 + MER3 DNA MER1_type 41 91 -118 * 351 174 47 23 chr20 2810001 2810087 -63857918 - MER3 DNA MER1_type -120 89 2 234 111 37 19 chr20 2810241 2810295 -63857710 - L1MC4 LINE L1 0 8042 7988 2184 125 0 7 chr20 2810372 2810676 -63857329 + AluSx SINE Alu 1 302 -10 3749 214 101 19 chr20 2810757 2811724 -63856281 - L1MC4 LINE L1 -372 7670 6595 315 0 0 0 chr20 2811724 2811759 -63856246 + (TG)n Simple_repeat Simple_repeat 2 36 0 3749 214 101 19 chr20 2811759 2811918 -63856087 - L1MC4 LINE L1 -1447 6595 6451 999 268 7 30 chr20 2812017 2812286 -63855719 - MER82 DNA MER2_type 0 653 391 865 122 6 72 chr20 2812286 2812357 -63855648 - L1MB5 LINE L1 -287 5887 5813 924 188 11 23 chr20 2812357 2812533 -63855472 - FAM SINE Alu 0 175 2 865 122 6 72 chr20 2812533 2812642 -63855363 - L1MB5 LINE L1 -361 5813 5719 1551 150 108 95 chr20 2812645 2812984 -63855021 - L1MB5 LINE L1 -748 5398 5065 1652 156 54 4 chr20 2812984 2813260 -63854745 + AluSx SINE Alu 1 290 -22 1551 150 108 95 chr20 2813260 2813312 -63854693 - L1MB5 LINE L1 -1081 5065 5015 1992 126 3 13 chr20 2813312 2813613 -63854392 - AluJb SINE Alu -6 306 9 1551 150 108 95 chr20 2813613 2813748 -63854257 - L1MB5 LINE L1 -1131 5015 4864 358 269 0 15 chr20 2813749 2813844 -63854161 + AluJ/FLAM SINE Alu 5 80 -222 781 175 91 0 chr20 2813850 2814004 -63854001 + FRAM SINE Alu 1 167 -9 1100 169 14 25 chr20 2814004 2814226 -63853779 - L1MB5 LINE L1 -1291 4855 4637 2270 92 3 3 chr20 2814226 2814520 -63853485 - AluSx SINE Alu -2 310 17 1100 169 14 25 chr20 2814520 2814544 -63853461 - L1MB5 LINE L1 -1509 4637 4614 444 235 54 7 chr20 2814775 2814924 -63853081 - L1MEd LINE L1 -5922 197 42 765 164 25 0 chr20 2814969 2815091 -63852914 + FLAM_A SINE Alu 1 125 -8 2108 101 0 0 chr20 2815110 2815387 -63852618 + AluSg1 SINE Alu 24 300 -9 523 177 113 40 chr20 2815469 2815593 -63852412 - FLAM_A SINE Alu 0 133 1 575 267 53 65 chr20 2816067 2816329 -63851676 + MIR SINE MIR 4 262 0 282 243 135 0 chr20 2816747 2816821 -63851184 - L2 LINE L2 -26 3246 3163 546 159 62 9 chr20 2816823 2816936 -63851069 - FRAM SINE Alu -13 163 45 1298 209 95 0 chr20 2817082 2817388 -63850617 + MER58B DNA MER1_type 4 338 -3 421 189 32 162 chr20 2817610 2817795 -63850210 - MER5B DNA MER1_type -1 177 17 180 0 0 0 chr20 2818601 2818621 -63849384 + (T)n Simple_repeat Simple_repeat 1 20 0 278 329 89 0 chr20 2818928 2819086 -63848919 - LTR16A LTR ERVL -3 447 276 913 196 16 21 chr20 2819187 2819376 -63848629 - MER20 DNA MER1_type -1 218 31 225 0 0 0 chr20 2819613 2819638 -63848367 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 2191 89 0 7 chr20 2819638 2819920 -63848085 - AluSx SINE Alu -32 280 1 2110 124 10 0 chr20 2819923 2820213 -63847792 - AluSx SINE Alu -19 293 1 1142 207 50 0 chr20 2820214 2820436 -63847569 - AluJo SINE Alu -21 291 59 21 0 0 0 chr20 2820681 2820702 -63847303 + AT_rich Low_complexity Low_complexity 1 21 0 197 262 24 0 chr20 2820726 2820768 -63847237 + MER5B DNA MER1_type 7 49 -129 2250 106 3 3 chr20 2820795 2821097 -63846908 + AluSq SINE Alu 1 302 -11 1236 225 58 81 chr20 2821172 2821415 -63846590 + L1ME3 LINE L1 5541 5788 -374 1691 144 53 14 chr20 2821415 2821699 -63846306 + AluSg SINE Alu 1 295 -15 1236 225 58 81 chr20 2821699 2821962 -63846043 + L1ME3 LINE L1 5788 6037 -125 2311 102 0 0 chr20 2821962 2822257 -63845748 - AluSc SINE Alu -14 295 1 1236 225 58 81 chr20 2822257 2822282 -63845723 + L1ME3 LINE L1 6037 6061 -101 3427 131 20 70 chr20 2822303 2822810 -63845195 - L1MB3 LINE L1 -12 6171 5707 2208 115 6 13 chr20 2822810 2823124 -63844881 + AluSx SINE Alu 1 312 0 3427 131 20 70 chr20 2823124 2823318 -63844687 - L1MB3 LINE L1 -476 5707 5505 1298 170 186 45 chr20 2823492 2823891 -63844114 - MLT1C LTR MaLR -2 465 11 238 218 0 0 chr20 2823884 2823939 -63844066 + AluJ/monomer SINE Alu 247 301 -1 * 192 152 0 0 chr20 2824012 2824045 -63843960 + CT-rich Low_complexity Low_complexity 2 34 0 2312 108 0 6 chr20 2824055 2824369 -63843636 - AluSx SINE Alu 0 312 1 706 71 152 0 chr20 2824369 2824481 -63843524 - AluSc SINE Alu -176 133 5 2090 116 0 0 chr20 2825010 2825286 -63842719 + AluSx SINE Alu 5 280 -32 195 100 0 0 chr20 2825286 2825316 -63842689 + (CAAT)n Simple_repeat Simple_repeat 4 33 0 539 204 32 82 chr20 2825322 2825398 -63842607 - HAL1 LINE L1 -796 1711 1633 207 0 0 0 chr20 2825398 2825421 -63842584 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1975 84 103 0 chr20 2825423 2825686 -63842319 - AluY SINE Alu -21 290 1 539 204 32 82 chr20 2825686 2825826 -63842179 - HAL1 LINE L1 -875 1632 1503 286 259 26 0 chr20 2825981 2826097 -63841908 - HAL1 LINE L1 -1279 1228 1110 1807 161 47 3 chr20 2826097 2826395 -63841610 - AluJb SINE Alu -1 311 1 1047 82 7 7 chr20 2826395 2826530 -63841475 - AluJb SINE Alu -177 135 1 1498 158 18 52 chr20 2826798 2826821 -63841184 + MLT1B LTR MaLR 74 96 -294 1939 180 0 0 chr20 2826821 2827121 -63840884 + AluJo SINE Alu 1 300 -12 1498 158 18 52 chr20 2827121 2827425 -63840580 + MLT1B LTR MaLR 96 390 0 1981 154 103 19 chr20 2827725 2828154 -63839851 - MLT1C LTR MaLR -2 465 1 198 284 32 42 chr20 2828359 2828454 -63839551 + MER5A DNA MER1_type 57 150 -39 261 0 0 0 chr20 2828997 2829026 -63838979 + (TG)n Simple_repeat Simple_repeat 2 30 0 633 164 119 22 chr20 2829028 2829162 -63838843 - FRAM SINE Alu -30 146 1 212 226 189 0 chr20 2829171 2829224 -63838781 + L2 LINE L2 3208 3270 -2 285 317 30 10 chr20 2829259 2829360 -63838645 + L2 LINE L2 3208 3310 -3 317 227 117 12 chr20 2830441 2830604 -63837401 - L1MC/D LINE L1 -2322 5486 5307 1932 147 3 22 chr20 2830695 2830714 -63837291 - AluSx SINE Alu -5 307 289 288 0 0 0 chr20 2830714 2830746 -63837259 + (TTGG)n Simple_repeat Simple_repeat 4 35 0 1932 147 3 22 chr20 2830746 2831039 -63836966 - AluSx SINE Alu -23 289 1 1526 165 8 12 chr20 2831419 2831674 -63836331 - AluJb SINE Alu -49 263 10 246 152 152 0 chr20 2831850 2831929 -63836076 - L1MD3 LINE L1 0 7995 7905 2229 116 3 0 chr20 2831948 2832250 -63835755 - AluSx SINE Alu -9 303 1 3239 119 10 54 chr20 2832322 2832848 -63835157 - L1MA8 LINE L1 -181 6110 5612 1141 189 96 62 chr20 2832848 2833013 -63834992 - AluJo SINE Alu -1 301 120 2098 120 0 13 chr20 2833013 2833312 -63834693 + AluSq SINE Alu 3 297 -16 1141 189 96 62 chr20 2833312 2833437 -63834568 - AluJo SINE Alu -182 120 1 3239 119 10 54 chr20 2833437 2833507 -63834498 - L1MA8 LINE L1 -679 5612 5540 2675 193 141 83 chr20 2833561 2833606 -63834399 - L1MDb LINE L1 -3890 2650 2609 845 148 0 15 chr20 2833606 2833741 -63834264 - FLAM_C SINE Alu 0 133 1 1818 155 3 43 chr20 2833747 2834051 -63833954 - AluJb SINE Alu -20 292 1 2675 193 141 83 chr20 2834051 2834396 -63833609 - L1MDb LINE L1 -3935 2605 2281 2335 105 0 3 chr20 2834396 2834700 -63833305 - AluSc SINE Alu -5 304 2 2675 193 141 83 chr20 2834700 2835315 -63832690 - L1MDb LINE L1 -4259 2281 1703 796 182 0 0 chr20 2835315 2835436 -63832569 + FLAM_C SINE Alu 1 121 -12 2675 193 141 83 chr20 2835436 2835455 -63832550 - L1MDb LINE L1 -4837 1703 1687 2207 117 0 3 chr20 2835455 2835762 -63832243 - AluSx SINE Alu -4 308 3 2675 193 141 83 chr20 2835762 2836359 -63831646 - L1MDb LINE L1 -4853 1687 956 264 279 73 22 chr20 2836438 2836574 -63831431 - L1MDb LINE L1 -5596 934 792 816 244 29 77 chr20 2836800 2837103 -63830902 - L1MDb LINE L1 -6181 359 76 2360 84 0 10 chr20 2837103 2837414 -63830591 + AluSq SINE Alu 1 308 -5 816 244 29 77 chr20 2837414 2837487 -63830518 - L1MDb LINE L1 -6464 76 1 714 200 0 15 chr20 2837598 2837733 -63830272 - FLAM_A SINE Alu 0 133 1 271 346 0 0 chr20 2837764 2837842 -63830163 + MER58 DNA MER1_type 1 78 -263 671 165 9 0 chr20 2837843 2837958 -63830047 - AluJb SINE Alu -15 297 182 625 183 107 0 chr20 2837984 2838115 -63829890 + MER58 DNA MER1_type 142 2365 -55 2281 83 6 22 chr20 2838292 2838604 -63829401 - AluSx SINE Alu 0 312 6 565 308 125 76 chr20 2838797 2839368 -63828637 + L2 LINE L2 2654 3251 -21 215 204 45 0 chr20 2839334 2839378 -63828627 + MIR SINE MIR 214 259 -3 * 351 351 32 5 chr20 2839422 2839607 -63828398 - L1MEd LINE L1 -2235 3894 3705 284 305 17 17 chr20 2839659 2839836 -63828169 - L1MEd LINE L1 -3835 2294 2118 422 198 69 0 chr20 2839863 2839964 -63828041 + MLT2D LTR ERVL 189 296 -118 33 43 0 0 chr20 2839985 2840032 -63827973 + AT_rich Low_complexity Low_complexity 1 47 0 962 97 141 22 chr20 2840087 2840272 -63827733 - Tigger7 DNA MER2_type 0 2487 2281 554 149 0 91 chr20 2840400 2840521 -63827484 + Tigger7 DNA MER2_type 2478 2587 0 27 92 0 0 chr20 2840521 2840597 -63827408 + AT_rich Low_complexity Low_complexity 1 76 0 1121 220 25 28 chr20 2840614 2840896 -63827109 - MLT2D LTR ERVL -114 300 20 1135 202 12 8 chr20 2840896 2841143 -63826862 - ERVL-D LTR ERVL -1 5763 5516 1142 255 85 51 chr20 2841185 2841318 -63826687 - MLT1H LTR MaLR -1 548 421 2257 119 0 3 chr20 2841318 2841620 -63826385 - AluSx SINE Alu -11 301 1 1142 255 85 51 chr20 2841620 2842016 -63825989 - MLT1H LTR MaLR -128 421 1 532 284 20 47 chr20 2842065 2842473 -63825532 - L1MEd LINE L1 -4908 1211 952 270 0 0 0 chr20 2842861 2842891 -63825114 + (TG)n Simple_repeat Simple_repeat 2 31 0 180 0 0 0 chr20 2842902 2842922 -63825083 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 1984 151 0 0 chr20 2842925 2843209 -63824796 + AluSx SINE Alu 1 284 -28 185 197 16 0 chr20 2843209 2843270 -63824735 + (TA)n Simple_repeat Simple_repeat 1 62 0 2510 75 0 0 chr20 2843846 2844154 -63823851 + AluSg SINE Alu 1 308 -2 2448 71 0 3 chr20 2845950 2846259 -63821746 + AluY SINE Alu 3 310 -1 206 121 0 0 chr20 2846581 2846614 -63821391 + (T)n Simple_repeat Simple_repeat 1 33 0 823 136 24 16 chr20 2846745 2846870 -63821135 - FLAM_C SINE Alu -17 126 1 764 276 81 25 chr20 2846873 2847395 -63820610 - L1M4 LINE L1 -1990 4156 3606 401 302 124 34 chr20 2847409 2847635 -63820370 - L1M4 LINE L1 -2614 3532 3277 2438 53 0 17 chr20 2847635 2847935 -63820070 + AluY SINE Alu 1 295 -16 401 302 124 34 chr20 2847935 2847973 -63820032 - L1M4 LINE L1 -2869 3277 3244 538 269 19 54 chr20 2848080 2848340 -63819665 - L1ME1 LINE L1 -15 6151 5901 2253 93 3 7 chr20 2848367 2848677 -63819328 - AluY SINE Alu -1 310 2 1660 221 93 14 chr20 2848694 2849137 -63818868 + MER74A LTR ERVL 77 554 -4 2064 93 68 0 chr20 2849137 2849417 -63818588 + AluSc SINE Alu 1 299 -10 1213 211 34 10 chr20 2849417 2849821 -63818184 - L1ME1 LINE L1 -583 5583 5170 4035 130 24 42 chr20 2849822 2850521 -63817484 - L1MB3 LINE L1 -7 6176 5489 2266 113 3 0 chr20 2850521 2850831 -63817174 - AluY SINE Alu 0 311 1 4035 130 24 42 chr20 2850831 2850876 -63817129 - L1MB3 LINE L1 -694 5489 5445 1854 147 51 0 chr20 2850877 2851169 -63816836 - AluSg SINE Alu -3 307 1 180 0 0 0 chr20 2851172 2851192 -63816813 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1716 138 33 53 chr20 2851197 2851356 -63816649 - AluJo SINE Alu -14 298 146 2408 76 13 3 chr20 2851356 2851657 -63816348 - AluSq SINE Alu -9 304 1 1716 138 33 53 chr20 2851657 2851801 -63816204 - AluJo SINE Alu -166 146 1 2237 227 52 5 chr20 2851801 2852421 -63815584 - L1MB3 LINE L1 -814 5332 4684 192 375 62 28 chr20 2853409 2853697 -63814308 + L2 LINE L2 2593 2890 -424 328 173 0 0 chr20 2853880 2853976 -63814029 + AluJ/FRAM SINE Alu 232 327 0 1245 244 128 28 chr20 2853979 2854282 -63813723 - L1MC/D LINE L1 -2029 5779 5419 2458 70 0 0 chr20 2854282 2854580 -63813425 + AluY SINE Alu 1 298 -13 1245 244 128 28 chr20 2854580 2854706 -63813299 - L1MC/D LINE L1 -2389 5419 5307 207 259 82 24 chr20 2854759 2854844 -63813161 - L2 LINE L2 -1520 1794 1705 471 316 116 48 chr20 2854983 2855726 -63812279 - L2 LINE L2 -1856 1458 666 2252 82 6 79 chr20 2855817 2856147 -63811858 + AluSx SINE Alu 1 306 -6 4845 180 66 29 chr20 2856878 2856949 -63811056 - L1MC1 LINE L1 -2 6331 6264 2082 150 0 0 chr20 2856949 2857249 -63810756 + AluSg SINE Alu 1 300 -10 4845 180 66 29 chr20 2857249 2857528 -63810477 - L1MC1 LINE L1 -69 6264 5997 2488 55 7 0 chr20 2857528 2857821 -63810184 - AluY SINE Alu -12 299 5 1731 186 7 7 chr20 2857825 2858115 -63809890 - AluJo SINE Alu -22 290 1 4845 180 66 29 chr20 2858115 2859504 -63808501 - L1MC1 LINE L1 -338 5995 4518 226 282 107 23 chr20 2859640 2859771 -63808234 - L1MC/D LINE L1 -1096 5050 4909 220 345 12 12 chr20 2860235 2860319 -63807686 + L2 LINE L2 3151 3234 -38 252 234 0 0 chr20 2860493 2860557 -63807448 - MER5B DNA MER1_type -18 160 97 2051 122 28 0 chr20 2860600 2860888 -63807117 + AluSx SINE Alu 3 298 -14 738 148 74 0 chr20 2860913 2861035 -63806970 + MER46A DNA MER2_type 1 131 -105 1679 184 3 14 chr20 2861035 2861328 -63806677 + AluJo SINE Alu 1 290 -22 279 258 72 0 chr20 2863139 2863236 -63804769 + MIR SINE MIR 94 197 -65 757 216 45 61 chr20 2863475 2863720 -63804285 + MIR SINE MIR 1 241 -21 1767 259 172 24 chr20 2864653 2864857 -63803148 - HAL1 LINE L1 -271 2236 2063 2078 139 0 0 chr20 2864857 2865145 -63802860 + AluJb SINE Alu 1 288 -24 1767 259 172 24 chr20 2865145 2865890 -63802115 - HAL1 LINE L1 -444 2063 1147 1652 181 10 14 chr20 2865910 2866202 -63801803 + AluJo SINE Alu 1 291 -21 1789 151 20 37 chr20 2866204 2866503 -63801502 + AluSx SINE Alu 1 294 -18 2093 116 10 0 chr20 2866531 2866823 -63801182 - AluSg SINE Alu -15 295 1 842 69 0 0 chr20 2866851 2866953 -63801052 + AluY SINE Alu 1 102 -209 2296 70 0 14 chr20 2866963 2867274 -63800731 + AluY SINE Alu 1 307 0 905 276 158 43 chr20 2867415 2868084 -63799921 - L1MC/D LINE L1 -743 5403 4908 180 0 0 0 chr20 2868084 2868104 -63799901 + (TG)n Simple_repeat Simple_repeat 2 21 0 905 276 158 43 chr20 2868104 2868615 -63799390 - L1MC/D LINE L1 -1238 4908 4457 265 332 104 23 chr20 2868618 2869103 -63798902 - L1MC/D LINE L1 -1755 4391 3855 1922 89 44 4 chr20 2869113 2869407 -63798598 - AluSg SINE Alu 0 305 1 1381 197 16 4 chr20 2869520 2869769 -63798236 - AluJo SINE Alu -48 264 13 1904 152 0 10 chr20 2870002 2870298 -63797707 - AluJb SINE Alu -19 293 1 387 293 146 40 chr20 2870298 2870701 -63797304 - L1MC/D LINE L1 -2751 3395 2950 800 260 107 85 chr20 2870714 2871170 -63796835 - MLT1J LTR MaLR -21 429 1 2312 89 3 19 chr20 2871216 2871532 -63796473 - AluY SINE Alu 0 311 1 804 211 6 6 chr20 2871542 2871703 -63796302 - AluSg/x SINE Alu -25 285 125 1934 93 4 16 chr20 2871708 2871966 -63796039 - AluSx SINE Alu -15 297 43 2395 73 0 51 chr20 2874274 2874587 -63793418 + AluSg SINE Alu 1 297 -13 1759 151 4 0 chr20 2874675 2874934 -63793071 + AluJb SINE Alu 34 293 -19 194 136 23 0 chr20 2875053 2875097 -63792908 + (TA)n Simple_repeat Simple_repeat 1 45 0 923 211 51 0 chr20 2875990 2876165 -63791840 - MER58A DNA MER1_type -39 185 2 209 304 167 42 chr20 2876268 2876436 -63791569 - MIR SINE MIR -53 209 21 366 268 59 57 chr20 2876587 2876800 -63791205 - L1MEd LINE L1 -1218 1272 963 1770 124 0 87 chr20 2876800 2877122 -63790883 - AluJo SINE Alu -18 294 1 2260 110 3 0 chr20 2877170 2877490 -63790515 - AluSp SINE Alu 0 313 1 1840 132 64 0 chr20 2877564 2877845 -63790160 + AluSx SINE Alu 1 299 -13 668 160 15 61 chr20 2877854 2877985 -63790020 + FLAM_C SINE Alu 9 133 -10 537 273 49 23 chr20 2878359 2878623 -63789382 + L1MC5 LINE L1 7513 7783 -178 974 228 39 0 chr20 2878645 2878851 -63789154 + MER20 DNA MER1_type 1 214 -5 2139 92 7 0 chr20 2879357 2879638 -63788367 - AluSg SINE Alu 0 310 28 366 272 67 56 chr20 2879754 2879934 -63788071 - L2 LINE L2 -18 3295 3114 2376 97 0 10 chr20 2879977 2880276 -63787729 - AluSg SINE Alu -14 296 1 216 307 0 0 chr20 2880288 2880363 -63787642 - MIR SINE MIR -17 245 171 1181 300 155 34 chr20 2880397 2881381 -63786624 - L2 LINE L2 -200 3072 1977 850 266 63 39 chr20 2881435 2881848 -63786157 + L2 LINE L2 1656 2078 -1236 790 284 135 31 chr20 2881855 2882412 -63785593 + L2 LINE L2 2697 3310 -3 415 300 48 32 chr20 2882408 2882658 -63785347 - L2 LINE L2 -1345 1969 1716 * 537 151 35 0 chr20 2883071 2883157 -63784848 - AluJ/FLAM SINE Alu -223 89 1 1607 185 11 0 chr20 2883163 2883481 -63784524 - AluJb SINE Alu 0 325 5 412 252 35 26 chr20 2883683 2883798 -63784207 - L2 LINE L2 -27 3286 3171 426 333 26 19 chr20 2885984 2886140 -63781865 - L2 LINE L2 -1 3271 3115 2298 88 3 0 chr20 2886432 2886717 -63781288 + AluSc SINE Alu 1 286 -23 190 368 39 45 chr20 2886989 2887014 -63780991 - L2 LINE L2 -601 2713 2689 2365 88 0 0 chr20 2887014 2887310 -63780695 + AluY SINE Alu 1 296 -15 190 368 39 45 chr20 2887310 2887439 -63780566 - L2 LINE L2 -625 2689 2560 374 252 160 28 chr20 2887462 2887710 -63780295 - MLT1L LTR MaLR -107 508 126 1661 174 3 46 chr20 2887714 2888018 -63779987 + AluJb SINE Alu 1 291 -21 225 273 153 40 chr20 2888130 2888280 -63779725 - L2 LINE L2 -566 2748 2582 2239 100 0 35 chr20 2888351 2888662 -63779343 + AluSq SINE Alu 2 301 -12 306 206 279 29 chr20 2888990 2889126 -63778879 - MER70-int LTR ERVL -1517 4137 3968 396 251 21 112 chr20 2889427 2889518 -63778487 - MER70-int LTR ERVL -2183 3471 3404 2355 99 0 0 chr20 2889518 2889820 -63778185 + AluSq SINE Alu 6 307 -6 396 251 21 112 chr20 2889820 2889915 -63778090 - MER70-int LTR ERVL -2250 3404 3302 1611 169 37 4 chr20 2890089 2890362 -63777643 + AluJo SINE Alu 1 282 -30 263 254 48 0 chr20 2890442 2890505 -63777500 - MER70-int LTR ERVL -3260 1763 1698 252 122 0 0 chr20 2891190 2891231 -63776774 + (CAGA)n Simple_repeat Simple_repeat 3 43 0 654 312 59 30 chr20 2891256 2891593 -63776412 - MER70-int LTR ERVL -3574 2080 1734 2368 98 0 0 chr20 2892126 2892423 -63775582 + AluSx SINE Alu 1 297 -15 867 142 0 0 chr20 2892576 2892696 -63775309 - FLAM_C SINE Alu -23 120 1 253 219 29 109 chr20 2893379 2893516 -63774489 - LTR67 LTR ERVL -3 554 429 529 254 202 21 chr20 2893858 2894413 -63773592 + L1MC4a LINE L1 5213 5399 -747 195 294 131 21 chr20 2894653 2894880 -63773125 + L3 LINE CR1 966 1269 -308 1327 132 26 161 chr20 2895127 2895475 -63772530 + AluJo SINE Alu 1 301 -1 237 311 146 0 chr20 2895899 2896002 -63772003 + L3 LINE CR1 1388 1505 -72 330 183 44 29 chr20 2896146 2896283 -63771722 + (TATAA)n Simple_repeat Simple_repeat 5 143 0 2520 260 121 17 chr20 2896303 2897282 -63770723 + L1ME2 LINE L1 4283 5484 -680 2101 113 0 14 chr20 2897282 2897574 -63770431 + AluSg SINE Alu 1 288 -22 2520 260 121 17 chr20 2897574 2898065 -63769940 + L1ME2 LINE L1 5484 5922 -242 21 82 0 0 chr20 2898244 2898293 -63769712 + AT_rich Low_complexity Low_complexity 1 49 0 1463 108 5 27 chr20 2899215 2899438 -63768567 + AluJo SINE Alu 85 302 -10 2357 95 3 3 chr20 2899601 2899905 -63768100 - AluSp SINE Alu -9 304 1 454 293 163 49 chr20 2899968 2900572 -63767433 + L2 LINE L2 2636 3313 0 338 307 78 42 chr20 2900587 2900779 -63767226 - L1ME LINE L1 -353 5768 5570 1664 168 32 36 chr20 2900815 2901124 -63766881 - AluJo SINE Alu -4 308 1 2361 99 0 0 chr20 2901294 2901596 -63766409 - AluSx SINE Alu -10 302 1 244 220 17 0 chr20 2901599 2901658 -63766347 - MIR SINE MIR -66 142 83 1905 161 3 10 chr20 2902554 2902859 -63765146 + AluJo SINE Alu 10 312 0 685 188 23 0 chr20 2903302 2903435 -63764570 - FLAM_C SINE Alu -6 137 2 276 232 133 33 chr20 2903458 2903473 -63764532 + Charlie7 DNA MER1_type 2446 2458 -154 1339 199 71 7 chr20 2903473 2903755 -63764250 - AluJo SINE Alu 0 302 3 276 232 133 33 chr20 2903755 2903890 -63764115 + Charlie7 DNA MER1_type 2458 2611 -1 1997 121 37 14 chr20 2903911 2904208 -63763797 - AluSx SINE Alu -8 304 1 293 240 161 60 chr20 2904265 2904532 -63763473 - L1MC4a LINE L1 -159 5962 5669 288 111 0 0 chr20 2905073 2905118 -63762887 + (TG)n Simple_repeat Simple_repeat 2 46 0 2516 108 52 70 chr20 2905449 2905890 -63762115 + L1MB3 LINE L1 5694 6126 -57 2053 77 19 71 chr20 2905890 2906200 -63761805 + AluSx SINE Alu 1 294 -18 2516 108 52 70 chr20 2906200 2906257 -63761748 + L1MB3 LINE L1 6126 6183 0 925 292 93 38 chr20 2907069 2907132 -63760873 - MLT1L LTR MaLR -4 611 553 1981 149 7 3 chr20 2907132 2907428 -63760577 - AluSx SINE Alu -15 297 1 925 292 93 38 chr20 2907428 2907625 -63760380 - MLT1L LTR MaLR -62 553 368 2742 45 0 0 chr20 2907625 2907936 -63760069 + AluY SINE Alu 1 311 0 925 292 93 38 chr20 2907936 2908252 -63759753 - MLT1L LTR MaLR -247 368 2 296 250 0 25 chr20 2908582 2908662 -63759343 - L2 LINE L2 -1 3271 3194 188 346 39 0 chr20 2908792 2908896 -63759109 - L2 LINE L2 -251 3021 2914 416 255 46 72 chr20 2908971 2909124 -63758881 - LTR67 LTR ERVL 0 557 409 381 300 61 33 chr20 2909166 2909346 -63758659 - LTR67 LTR ERVL -259 298 114 481 198 9 9 chr20 2910082 2910198 -63757807 - L1MB8 LINE L1 -15 6163 6048 582 185 62 19 chr20 2910198 2910360 -63757645 - L1MB8 LINE L1 -5 6173 6005 2274 89 24 0 chr20 2910698 2910989 -63757016 - AluSp SINE Alu -15 298 1 2195 112 0 20 chr20 2911634 2911937 -63756068 + AluSx SINE Alu 1 297 -15 2136 127 6 16 chr20 2912569 2912884 -63755121 - AluSx SINE Alu 0 312 1 1980 142 28 0 chr20 2913744 2914026 -63753979 + AluSx SINE Alu 1 290 -22 1070 251 161 24 chr20 2914117 2914668 -63753337 - HAL1 LINE L1 -221 2286 1660 271 0 25 25 chr20 2915479 2915519 -63752486 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 6821 62 16 42 chr20 2915519 2916484 -63751521 - SVA Other Other -17 1369 430 6354 67 27 11 chr20 2916546 2917386 -63750619 - SVA Other Other -520 866 13 2263 63 45 11 chr20 2917389 2917676 -63750329 - AluY SINE Alu -14 297 1 265 256 72 28 chr20 2919109 2919220 -63748785 + MIR3 SINE MIR 3 115 -114 4690 171 50 37 chr20 2920218 2921174 -63746831 + LTR5 LTR ERVK 1 969 0 945 215 25 10 chr20 2922169 2922369 -63745636 - MER58A DNA MER1_type -15 209 7 2422 97 0 0 chr20 2922451 2922750 -63745255 + AluSg SINE Alu 1 299 -11 2332 107 3 0 chr20 2922867 2923165 -63744840 + AluSx SINE Alu 2 300 -12 322 176 51 95 chr20 2923171 2923215 -63744790 - MER5A DNA MER1_type -80 109 65 2160 117 30 0 chr20 2923215 2923515 -63744490 - AluSq SINE Alu -4 309 1 322 176 51 95 chr20 2923515 2923582 -63744423 - MER5A DNA MER1_type -124 65 4 302 335 28 57 chr20 2925694 2925906 -63742099 - L3 LINE CR1 -10 1567 1362 201 322 152 43 chr20 2925917 2926128 -63741877 - L2 LINE L2 -416 2898 2665 356 263 157 67 chr20 2926228 2926395 -63741610 - L3 LINE CR1 -611 966 815 2020 133 3 13 chr20 2926395 2926718 -63741287 - AluJb SINE Alu 0 312 2 356 263 157 67 chr20 2926718 2926819 -63741186 - L3 LINE CR1 -762 815 666 2022 116 46 0 chr20 2926819 2927104 -63740901 - AluSx SINE Alu -12 300 3 356 263 157 67 chr20 2927104 2927134 -63740871 - L3 LINE CR1 -911 666 640 2230 129 20 0 chr20 2927955 2928258 -63739747 - AluSx SINE Alu -3 309 1 2148 295 171 47 chr20 2928694 2929764 -63738241 + L2 LINE L2 605 1542 -1772 2374 98 0 0 chr20 2929764 2930059 -63737946 + AluSc SINE Alu 1 295 -14 2148 295 171 47 chr20 2930059 2930892 -63737113 + L2 LINE L2 1542 2743 -571 2497 70 7 0 chr20 2930898 2931199 -63736806 + AluSp SINE Alu 1 303 -10 2192 122 7 7 chr20 2931268 2931564 -63736441 + AluSx SINE Alu 4 299 -13 408 198 79 0 chr20 2932190 2932291 -63735714 - L2 LINE L2 -4 3268 3160 193 196 87 0 chr20 2933908 2933954 -63734051 + L2 LINE L2 3219 3268 -4 184 321 99 30 chr20 2937024 2937155 -63730850 - L2 LINE L2 -228 3044 2905 2106 125 7 3 chr20 2938167 2938463 -63729542 + AluJb SINE Alu 1 297 -15 2392 92 13 0 chr20 2938465 2938771 -63729234 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr20 2938771 2938792 -63729213 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr20 2943804 2943844 -63724161 + GC_rich Low_complexity Low_complexity 1 40 0 2008 78 52 0 chr20 2944397 2944693 -63723312 + AluSx SINE Alu 1 310 0 772 221 121 5 chr20 2945452 2945651 -63722354 + MER58A DNA MER1_type 2 223 -1 2575 66 3 0 chr20 2946291 2946595 -63721410 - AluY SINE Alu -6 305 1 349 273 76 0 chr20 2947894 2948026 -63719979 - HERVL LTR ERVL -2987 2667 2526 1752 97 112 4 chr20 2948578 2948845 -63719160 + AluSx SINE Alu 1 296 -16 2254 104 3 0 chr20 2949270 2949559 -63718446 + AluSx SINE Alu 1 290 -22 1781 115 87 52 chr20 2949569 2949855 -63718150 + AluSx SINE Alu 1 296 -16 1893 166 6 29 chr20 2949993 2950307 -63717698 + AluJb SINE Alu 1 307 -5 678 235 18 54 chr20 2950623 2950844 -63717161 + MIR SINE MIR 40 252 -10 2234 79 32 7 chr20 2950849 2951160 -63716845 - AluSp SINE Alu 0 318 1 213 39 0 0 chr20 2951163 2951189 -63716816 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2478 68 3 0 chr20 2951390 2951685 -63716320 - AluSp SINE Alu -15 298 3 2441 93 0 6 chr20 2951718 2952030 -63715975 + AluSx SINE Alu 1 310 -2 328 279 18 0 chr20 2952030 2952141 -63715864 - L1MC4 LINE L1 -164 7878 7766 839 129 0 43 chr20 2952202 2952341 -63715664 - FLAM_C SINE Alu 0 133 1 1819 145 29 17 chr20 2952341 2952679 -63715326 - L1MB2 LINE L1 -346 7244 6902 1977 115 7 46 chr20 2952679 2952983 -63715022 - AluSx SINE Alu -3 309 18 248 122 41 41 chr20 2953067 2953116 -63714889 - L1MB2 LINE L1 -3400 4165 4117 2421 99 0 0 chr20 2953157 2953470 -63714535 - AluSp SINE Alu 0 313 1 405 290 21 11 chr20 2953471 2953657 -63714348 - L1MB2 LINE L1 -4345 3220 3033 894 192 59 35 chr20 2953669 2953734 -63714271 - L1MB2 LINE L1 -4903 2662 2600 1567 180 6 54 chr20 2953734 2954051 -63713954 - AluJo SINE Alu -5 307 6 894 192 59 35 chr20 2954051 2954235 -63713770 - L1MB2 LINE L1 -4965 2600 2402 926 147 0 13 chr20 2954236 2954386 -63713619 + AluSq/x SINE Alu 1 148 -164 1874 138 7 10 chr20 2954386 2954511 -63713494 + AluSq SINE Alu 10 134 -179 2753 3 0 3 chr20 2954511 2954819 -63713186 + AluYa5 SINE Alu 5 311 0 1874 138 7 10 chr20 2954819 2954989 -63713016 + AluSq SINE Alu 134 304 -9 2136 119 3 3 chr20 2955166 2955477 -63712528 - AluJb SINE Alu 0 312 2 480 356 74 13 chr20 2955496 2955827 -63712178 + ERVL LTR ERVL 2908 3287 -1927 2149 102 3 0 chr20 2955848 2956142 -63711863 - AluSx SINE Alu -2 310 16 2070 104 14 0 chr20 2956153 2956455 -63711550 - AluSq SINE Alu 0 306 1 300 75 0 57 chr20 2956456 2956509 -63711496 + L1MA9 LINE L1 6263 6312 0 1533 261 80 56 chr20 2956622 2957232 -63710773 + L1 LINE L1 1110 1734 -5475 395 223 10 0 chr20 2957263 2957366 -63710639 + L1 LINE L1 3264 3367 -3841 1499 94 163 12 chr20 2957421 2957689 -63710316 - AluSg1 SINE Alu 0 305 1 2987 159 31 64 chr20 2957756 2958523 -63709482 + L1 LINE L1 4068 4809 -2399 513 238 0 0 chr20 2958523 2958624 -63709381 - Tigger2 DNA MER2_type -10 2708 2608 4525 158 32 23 chr20 2958627 2958683 -63709322 + L1 LINE L1 5498 5552 -1656 2354 65 3 10 chr20 2958683 2958989 -63709016 + AluSg SINE Alu 3 306 -4 4525 158 32 23 chr20 2958989 2959614 -63708391 + L1 LINE L1 5552 6169 -1039 189 0 0 0 chr20 2959614 2959635 -63708370 + (CAA)n Simple_repeat Simple_repeat 1 21 0 4525 158 32 23 chr20 2959635 2959830 -63708175 + L1 LINE L1 6169 6387 -821 2363 73 7 3 chr20 2959830 2960133 -63707872 + AluSg SINE Alu 1 304 -6 4525 158 32 23 chr20 2960133 2960176 -63707829 + L1 LINE L1 6387 6428 -780 703 147 0 0 chr20 2960177 2960279 -63707726 + FRAM SINE Alu 62 163 -13 2248 80 0 10 chr20 2960279 2960581 -63707424 + AluY SINE Alu 1 299 -12 4360 63 4 0 chr20 2960585 2961124 -63706881 + SVA Other Other 839 1379 -7 449 129 9 10 chr20 2961128 2961251 -63706754 + L1M3 LINE L1 5315 5440 -860 1767 144 14 7 chr20 2961251 2961543 -63706462 + AluSx SINE Alu 1 294 -18 980 140 67 0 chr20 2961544 2961708 -63706297 + AluJb SINE Alu 133 307 -5 821 248 124 28 chr20 2961708 2961733 -63706272 + L1ME1 LINE L1 5804 5825 -341 4403 117 21 44 chr20 2961733 2962440 -63705565 - LTR8 LTR ERV1 0 691 1 821 248 124 28 chr20 2962440 2962736 -63705269 + L1ME1 LINE L1 5825 6156 -10 184 247 164 0 chr20 2962760 2962833 -63705172 + L2 LINE L2 1928 2012 -1302 805 238 97 28 chr20 2962872 2962945 -63705060 + L2 LINE L2 2140 2207 -1107 2140 109 10 0 chr20 2962945 2963248 -63704757 + AluSp SINE Alu 1 306 -7 805 238 97 28 chr20 2963248 2963464 -63704541 + L2 LINE L2 2207 2449 -865 2137 116 0 3 chr20 2963464 2963774 -63704231 - AluSx SINE Alu -3 309 1 951 156 13 0 chr20 2963780 2963934 -63704071 - AluSg/x SINE Alu -20 292 137 1070 222 226 5 chr20 2963935 2964123 -63703882 + L2 LINE L2 2439 2584 -730 2245 77 3 3 chr20 2964123 2964420 -63703585 - AluY SINE Alu -12 299 3 1070 222 226 5 chr20 2964420 2964655 -63703350 + L2 LINE L2 2584 2956 -358 239 217 0 22 chr20 2964666 2964712 -63703293 + MLT1E1 LTR MaLR 7 51 -573 1632 95 95 39 chr20 2964782 2965065 -63702940 - AluSx SINE Alu -13 299 1 292 161 0 0 chr20 2965066 2965122 -63702883 + Alu SINE Alu 243 298 -4 726 200 203 42 chr20 2965193 2965568 -63702437 + MLT1E1 LTR MaLR 123 562 -31 1893 153 0 10 chr20 2965568 2965876 -63702129 - AluJo SINE Alu -7 305 1 726 200 203 42 chr20 2965876 2965911 -63702094 + MLT1E1 LTR MaLR 562 590 -3 324 272 17 92 chr20 2965942 2966181 -63701824 + L2 LINE L2 3028 3248 -65 1217 249 143 5 chr20 2966678 2967055 -63700950 - LTR16A LTR ERVL -3 447 19 1481 96 5 36 chr20 2967164 2967384 -63700621 - AluSg/x SINE Alu -17 293 81 1099 232 51 40 chr20 2967409 2967460 -63700545 - Charlie4a DNA MER1_type -1534 427 378 2133 94 0 17 chr20 2967460 2967757 -63700248 + AluSx SINE Alu 1 292 -20 1099 232 51 40 chr20 2967757 2967796 -63700209 - Charlie4a DNA MER1_type -1583 378 341 1937 129 0 26 chr20 2967796 2968099 -63699906 - AluJo SINE Alu -17 295 1 1099 232 51 40 chr20 2968099 2968382 -63699623 - Charlie4a DNA MER1_type -1620 341 49 3079 108 76 125 chr20 2970526 2970566 -63697439 - MER4A LTR ERV1 -1 663 623 2087 128 0 0 chr20 2970566 2970863 -63697142 - AluSq SINE Alu -16 297 1 3079 108 76 125 chr20 2970863 2970895 -63697110 - MER4A LTR ERV1 -41 623 591 1956 134 3 7 chr20 2970895 2971200 -63696805 + AluSq SINE Alu 1 304 -9 3079 108 76 125 chr20 2971200 2971254 -63696751 - MER4A LTR ERV1 -73 591 536 2180 94 0 27 chr20 2971254 2971552 -63696453 - AluSg SINE Alu -20 290 1 3079 108 76 125 chr20 2971552 2972120 -63695885 - MER4A LTR ERV1 -128 536 1 524 275 80 2 chr20 2972332 2972569 -63695436 + L1ME3A LINE L1 5874 6143 -22 735 211 51 6 chr20 2972574 2972749 -63695256 - MER2 DNA MER2_type 0 345 163 1831 141 10 16 chr20 2972749 2973053 -63694952 - AluSx SINE Alu -10 302 1 1632 166 7 26 chr20 2973658 2973966 -63694039 + AluSx SINE Alu 1 302 -10 282 280 72 98 chr20 2974037 2974301 -63693704 - MLT1J2 LTR MaLR -4 446 190 1036 154 0 0 chr20 2974340 2974502 -63693503 + AluSp SINE Alu 137 298 -15 269 314 15 0 chr20 2974506 2974594 -63693411 - MLT1J2 LTR MaLR -291 155 66 2096 77 0 119 chr20 2974600 2974952 -63693053 - AluSx SINE Alu -1 311 2 1212 213 150 96 chr20 2974978 2975499 -63692506 + MLT1H LTR MaLR 1 549 0 2292 84 0 6 chr20 2976060 2976371 -63691634 - AluY SINE Alu -2 309 1 335 326 158 9 chr20 2976466 2976687 -63691318 + L1MEc LINE L1 38 291 -6105 1754 214 62 9 chr20 2976738 2977271 -63690734 + L1M4 LINE L1 4216 4776 -1370 820 210 0 56 chr20 2977271 2977466 -63690539 + AluJo SINE Alu 117 300 -12 240 200 0 0 chr20 2977466 2977511 -63690494 + L1M4 LINE L1 4800 4844 -1302 1361 127 104 0 chr20 2977511 2977731 -63690274 - AluSx SINE Alu -69 243 1 32 0 0 0 chr20 2977780 2977812 -63690193 + AT_rich Low_complexity Low_complexity 1 32 0 283 324 6 40 chr20 2978685 2978858 -63689147 + G-rich Low_complexity Low_complexity 3 169 0 233 243 66 22 chr20 2979426 2979562 -63688443 + (TCTCTG)n Simple_repeat Simple_repeat 2 143 0 22 56 0 0 chr20 2980217 2980253 -63687752 + GC_rich Low_complexity Low_complexity 1 36 0 257 111 0 0 chr20 2981152 2981188 -63686817 + tRNA-Arg-AGA tRNA tRNA 1 36 -40 480 323 21 26 chr20 2983346 2983538 -63684467 + MIR SINE MIR 24 214 -48 486 192 192 0 chr20 2983538 2983637 -63684368 + AluJo/FLAM SINE Alu 1 118 -194 2312 90 0 3 chr20 2983637 2983938 -63684067 - AluSx SINE Alu -12 300 1 28 35 0 35 chr20 2983945 2983970 -63684035 + AT_rich Low_complexity Low_complexity 1 25 -30 2004 114 7 7 chr20 2983970 2984259 -63683746 - AluSg SINE Alu -21 289 1 28 35 0 35 chr20 2984259 2984290 -63683715 + AT_rich Low_complexity Low_complexity 25 55 0 1651 155 54 0 chr20 2984302 2984579 -63683426 + AluJb SINE Alu 1 292 -20 2356 56 0 30 chr20 2984605 2984909 -63683096 + AluY SINE Alu 1 295 -16 2280 101 0 0 chr20 2984963 2985269 -63682736 - AluSq SINE Alu -7 306 1 187 355 91 21 chr20 2985666 2985852 -63682153 + L2 LINE L2 1175 1373 -1941 399 300 108 31 chr20 2985866 2986089 -63681916 - HAL1 LINE L1 -245 2262 2023 297 0 0 0 chr20 2986103 2986136 -63681869 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1539 271 72 35 chr20 2986179 2986282 -63681723 + L2 LINE L2 1824 1922 -1392 2414 74 0 6 chr20 2986282 2986594 -63681411 + AluSg SINE Alu 1 310 0 1539 271 72 35 chr20 2986594 2986663 -63681342 + L2 LINE L2 1922 1987 -1327 2487 53 0 0 chr20 2986663 2986966 -63681039 - AluY SINE Alu -8 303 1 1539 271 72 35 chr20 2986966 2987430 -63680575 + L2 LINE L2 1987 2485 -829 383 320 138 52 chr20 2987469 2987831 -63680174 + L2 LINE L2 2920 3312 -1 214 250 33 0 chr20 2987833 2987893 -63680112 + MIR SINE MIR 43 104 -104 892 149 0 8 chr20 2988217 2988391 -63679614 - FLAM_C SINE Alu 0 173 1 1880 135 36 7 chr20 2988427 2988730 -63679275 - AluJb SINE Alu 0 312 1 1714 92 0 0 chr20 2988792 2989020 -63678985 - AluSq SINE Alu -80 233 6 2245 75 0 14 chr20 2989324 2989617 -63678388 + AluSg SINE Alu 1 289 -21 2454 62 0 0 chr20 2990900 2991205 -63676800 + AluSq SINE Alu 1 305 -8 806 204 63 45 chr20 2991209 2991430 -63676575 - MIR SINE MIR -30 232 8 1644 143 6 117 chr20 2991449 2991807 -63676198 + 7SLRNA srpRNA srpRNA 1 318 -2 858 215 0 0 chr20 2991809 2991972 -63676033 + AluJo/FRAM SINE Alu 140 302 0 223 304 24 56 chr20 2992447 2992572 -63675433 - MIR SINE MIR -64 144 24 193 244 171 0 chr20 2992669 2992792 -63675213 + L2 LINE L2 2715 2858 -456 2018 136 3 3 chr20 2992880 2993181 -63674824 - AluSx SINE Alu -11 301 1 1809 151 3 10 chr20 2993275 2993573 -63674432 - AluSx SINE Alu -1 311 16 1610 173 21 21 chr20 2993579 2993868 -63674137 - AluJo SINE Alu -22 290 2 861 142 122 146 chr20 2993981 2994124 -63673881 - AluJo SINE Alu -6 306 161 2168 82 27 0 chr20 2994124 2994416 -63673589 - AluSp SINE Alu -13 300 1 2151 85 44 0 chr20 2994424 2994718 -63673287 - AluSg SINE Alu -3 307 1 2346 73 0 7 chr20 2994727 2995027 -63672978 - AluY SINE Alu -13 298 1 861 142 122 146 chr20 2995027 2995111 -63672894 - AluJo SINE Alu -166 146 66 2029 147 0 0 chr20 2995299 2995606 -63672399 + AluSx SINE Alu 2 308 -4 408 293 78 29 chr20 2995761 2995966 -63672039 - ERVL LTR ERVL -3157 2607 2393 1665 147 43 14 chr20 2996054 2996177 -63671828 + AluSq SINE Alu 14 132 -181 1947 123 45 0 chr20 2996177 2996469 -63671536 + AluY SINE Alu 1 305 -6 1665 147 43 14 chr20 2996469 2996624 -63671381 + AluSq SINE Alu 132 300 -13 2167 118 3 0 chr20 2996658 2996963 -63671042 - AluSx SINE Alu -6 306 1 962 159 0 25 chr20 2996963 2997126 -63670879 - AluJb SINE Alu -12 300 142 2074 91 0 14 chr20 2997133 2997419 -63670586 - AluSp SINE Alu -14 299 18 331 332 61 37 chr20 2997430 2997644 -63670361 - LTR16A1 LTR ERVL -235 222 4 1574 150 117 0 chr20 2997879 2998145 -63669860 - AluJo SINE Alu -15 297 1 1280 262 138 27 chr20 2998542 2998826 -63669179 - MLT1G LTR MaLR 0 590 339 2008 99 58 0 chr20 2998826 2999118 -63668887 - AluSq SINE Alu -4 309 1 1280 262 138 27 chr20 2999118 2999356 -63668649 - MLT1G LTR MaLR -251 339 10 216 250 73 0 chr20 3000754 3000822 -63667183 + MIR SINE MIR 177 249 -13 1108 246 62 0 chr20 3001063 3001372 -63666633 - L1MC/D LINE L1 -2153 5655 5328 237 119 0 0 chr20 3001480 3001522 -63666483 - AluJb SINE Alu -5 297 256 713 58 11 0 chr20 3001522 3001609 -63666396 - AluSq/x SINE Alu -193 119 32 1640 151 0 0 chr20 3001609 3001861 -63666144 - AluJb SINE Alu -60 252 1 2156 100 3 0 chr20 3001934 3002234 -63665771 - AluSx SINE Alu -11 301 1 248 308 105 15 chr20 3002329 3002462 -63665543 - L1MC/D LINE L1 -1217 4929 4785 2126 88 13 29 chr20 3002546 3002853 -63665152 - AluSq SINE Alu -11 302 1 424 181 0 0 chr20 3003389 3003461 -63664544 + MER3 DNA MER1_type 1 72 -137 538 184 18 0 chr20 3003468 3003582 -63664423 + Ricksha DNA DNA 8 123 -1058 354 155 0 48 chr20 3003566 3003650 -63664355 - Ricksha DNA DNA -1463 1783 1704 * 686 120 0 26 chr20 3003629 3003746 -63664259 - Ricksha DNA DNA -1066 115 2 653 193 89 0 chr20 3003746 3003881 -63664124 + MER3 DNA MER1_type 63 209 0 183 172 0 0 chr20 3005082 3005111 -63662894 + MER5A DNA MER1_type 51 79 -110 2352 101 0 0 chr20 3005390 3005686 -63662319 - AluSx SINE Alu -16 296 1 227 232 0 36 chr20 3005867 3005923 -63662082 + L3 LINE CR1 441 494 -1083 1960 144 45 0 chr20 3005942 3006233 -63661772 + AluJo SINE Alu 1 304 -8 975 114 0 0 chr20 3008004 3008135 -63659870 + FLAM_C SINE Alu 11 141 -2 257 338 232 3 chr20 3008861 3009163 -63658842 + L2 LINE L2 2897 3267 -5 243 217 0 0 chr20 3009402 3009462 -63658543 + GA-rich Low_complexity Low_complexity 1 60 0 2234 93 0 39 chr20 3009950 3010260 -63657745 + AluSx SINE Alu 1 298 -14 2089 107 0 74 chr20 3010270 3010596 -63657409 + AluSx SINE Alu 1 302 -10 223 324 144 35 chr20 3010617 3011132 -63656873 - L2 LINE L2 -470 2844 2216 2319 112 0 0 chr20 3011132 3011427 -63656578 + AluSq SINE Alu 3 297 -16 223 324 144 35 chr20 3011427 3011683 -63656322 - L2 LINE L2 -1098 2216 1989 2350 87 3 3 chr20 3011946 3012256 -63655749 + AluSg SINE Alu 1 310 0 2201 80 27 23 chr20 3013032 3013333 -63654672 - AluSc SINE Alu -7 302 1 2309 121 0 0 chr20 3014092 3014390 -63653615 + AluSx SINE Alu 1 298 -14 369 0 0 0 chr20 3014566 3014607 -63653398 + (CA)n Simple_repeat Simple_repeat 1 41 0 1925 129 4 4 chr20 3014680 3014960 -63653045 + AluSx SINE Alu 1 280 -32 2429 97 0 0 chr20 3014988 3015297 -63652708 + AluSx SINE Alu 1 309 -3 815 178 74 18 chr20 3015297 3015460 -63652545 + AluSg/x SINE Alu 134 305 -7 2044 149 3 0 chr20 3015469 3015765 -63652240 + AluSx SINE Alu 1 297 -15 2494 66 0 7 chr20 3015767 3016068 -63651937 + AluY SINE Alu 1 299 -12 1090 147 0 0 chr20 3016070 3016226 -63651779 + AluSg/x SINE Alu 134 289 -21 1304 207 88 76 chr20 3016375 3016820 -63651185 + MLT1E LTR MaLR 117 592 -1 2207 117 3 3 chr20 3016850 3017148 -63650857 + AluSx SINE Alu 1 298 -14 2214 101 20 3 chr20 3017350 3017646 -63650359 + AluSc SINE Alu 1 301 -8 2362 92 7 0 chr20 3017646 3017940 -63650065 + AluY SINE Alu 1 297 -14 310 239 53 53 chr20 3018856 3018969 -63649036 - L1M2 LINE L1 -6252 597 485 700 168 18 0 chr20 3020081 3020194 -63647811 + FLAM_A SINE Alu 1 115 -18 1703 155 23 58 chr20 3021184 3021493 -63646512 + AluJo SINE Alu 1 298 -14 6427 105 74 35 chr20 3021494 3023807 -63644198 + SVA Other Other 30 1386 0 433 209 0 18 chr20 3023811 3023981 -63644024 + GA-rich Low_complexity Low_complexity 1 166 0 2487 91 0 0 chr20 3024032 3024341 -63643664 + AluSq SINE Alu 1 309 -4 1257 229 85 21 chr20 3024595 3025059 -63642946 + MER20B DNA MER1_type 111 648 -135 1929 171 7 3 chr20 3025858 3026163 -63641842 + AluJo SINE Alu 1 306 -6 22 0 0 0 chr20 3027148 3027170 -63640835 + AT_rich Low_complexity Low_complexity 1 22 0 1679 151 47 25 chr20 3027227 3027556 -63640449 + AluJo SINE Alu 2 336 0 1030 191 12 0 chr20 3027614 3027787 -63640218 - FAM SINE Alu 0 175 1 909 296 132 46 chr20 3027911 3028228 -63639777 - L1M4 LINE L1 -1751 4395 4107 2295 111 3 0 chr20 3028228 3028525 -63639480 + AluSg SINE Alu 1 298 -12 909 296 132 46 chr20 3028525 3028812 -63639193 - L1M4 LINE L1 -2039 4107 3739 190 278 167 0 chr20 3028831 3028885 -63639120 - L2 LINE L2 -17 3255 3193 644 93 70 195 chr20 3028893 3029005 -63639000 + L1MC2 LINE L1 6036 6160 -184 2336 99 3 0 chr20 3029005 3029308 -63638697 + AluSx SINE Alu 1 304 -8 2077 125 0 3 chr20 3029308 3029622 -63638383 + AluSx SINE Alu 3 312 0 644 93 70 195 chr20 3029622 3029723 -63638282 + L1MC2 LINE L1 6158 6223 -121 226 154 19 0 chr20 3029733 3029785 -63638220 + L1MC2 LINE L1 6282 6334 -10 2158 115 7 3 chr20 3029820 3030116 -63637889 + AluSx SINE Alu 6 302 -10 826 157 22 8 chr20 3030117 3030251 -63637754 + AluJo SINE Alu 1 136 -176 252 235 73 0 chr20 3030854 3030922 -63637083 - L1MC4 LINE L1 -41 8001 7929 1810 140 0 56 chr20 3031014 3031335 -63636670 - AluJb SINE Alu -9 303 1 567 276 104 37 chr20 3031386 3031654 -63636351 - L1ME4a LINE L1 -158 5963 5678 770 114 0 0 chr20 3031751 3031856 -63636149 + AluSg/x SINE Alu 198 302 -10 2371 76 3 20 chr20 3031856 3032158 -63635847 + AluSq SINE Alu 1 297 -16 24 0 0 0 chr20 3032416 3032440 -63635565 + AT_rich Low_complexity Low_complexity 1 24 0 671 195 98 102 chr20 3032835 3033091 -63634914 - MER112 DNA MER1_type -1 255 1 263 224 0 40 chr20 3033097 3033173 -63634832 + L1MD2 LINE L1 6180 6252 -107 481 111 0 0 chr20 3033173 3033236 -63634769 + AluS SINE Alu 1 63 -255 225 204 0 0 chr20 3033485 3033529 -63634476 + T-rich Low_complexity Low_complexity 1 44 0 2296 122 0 3 chr20 3033622 3033933 -63634072 - AluSx SINE Alu -2 310 1 2289 104 0 0 chr20 3033945 3034233 -63633772 - AluY SINE Alu -23 288 1 1980 143 11 0 chr20 3034237 3034523 -63633482 - AluSx SINE Alu -23 289 1 999 224 102 14 chr20 3034549 3034628 -63633377 - L1MD2 LINE L1 -8 6351 6280 1748 82 55 0 chr20 3034628 3034847 -63633158 - AluSq SINE Alu -82 231 1 999 224 102 14 chr20 3034847 3035062 -63632943 - L1MD2 LINE L1 -79 6280 6031 2140 120 7 13 chr20 3035269 3035569 -63632436 + AluSx SINE Alu 1 298 -14 442 267 99 0 chr20 3035867 3035968 -63632037 + MER81 DNA DNA 3 113 -1 2102 103 0 75 chr20 3036640 3036992 -63631013 - AluSq SINE Alu 0 313 1 2140 134 0 0 chr20 3036994 3037286 -63630719 - AluSg SINE Alu -18 292 1 2426 97 0 22 chr20 3037286 3037605 -63630400 - AluSx SINE Alu 0 312 1 1094 143 6 6 chr20 3037989 3038164 -63629841 - L1PA16 LINE L1 -1 6165 5991 2430 99 0 0 chr20 3038195 3038497 -63629508 - AluSx SINE Alu -10 302 1 241 178 22 144 chr20 3038613 3038647 -63629358 + L1M4 LINE L1 3959 3996 -2150 2286 101 13 7 chr20 3038647 3038953 -63629052 + AluSp SINE Alu 4 311 -2 241 178 22 144 chr20 3038953 3039008 -63628997 + L1M4 LINE L1 3996 4037 -2109 1732 166 7 7 chr20 3039009 3039286 -63628719 + AluJo SINE Alu 1 277 -35 240 35 0 0 chr20 3039286 3039315 -63628690 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 840 143 14 14 chr20 3039318 3039458 -63628547 + AluJb SINE Alu 165 304 -8 2166 105 0 23 chr20 3039468 3039597 -63628408 + AluSx SINE Alu 11 141 -171 2246 118 0 10 chr20 3039597 3039902 -63628103 + AluSx SINE Alu 1 302 -10 2166 105 0 23 chr20 3039902 3040076 -63627929 + AluSx SINE Alu 141 307 -5 2948 171 85 154 chr20 3040086 3040376 -63627629 + L1M4 LINE L1 4033 4341 -1805 2000 136 27 13 chr20 3040376 3040677 -63627328 - AluSx SINE Alu -4 308 4 2948 171 85 154 chr20 3040677 3040796 -63627209 + L1M4 LINE L1 4341 4467 -1679 2302 82 7 3 chr20 3040796 3041088 -63626917 + AluSg1 SINE Alu 5 297 -12 1168 153 6 0 chr20 3041088 3041265 -63626740 + AluJo/FRAM SINE Alu 134 311 -1 2948 171 85 154 chr20 3041265 3041977 -63626028 + L1M4 LINE L1 4465 5242 -904 1505 176 85 4 chr20 3042439 3042711 -63625294 - AluJb SINE Alu -18 294 1 1835 179 13 0 chr20 3042711 3043013 -63624992 - AluJb SINE Alu -5 307 2 2156 125 0 0 chr20 3043042 3043338 -63624667 + AluSx SINE Alu 1 296 -16 2284 110 3 25 chr20 3043338 3043657 -63624348 + AluSx SINE Alu 1 312 0 2223 113 0 7 chr20 3047013 3047313 -63620692 + AluSx SINE Alu 1 298 -14 1373 183 97 25 chr20 3048164 3048326 -63619679 - AluJb SINE Alu -13 299 150 285 51 0 0 chr20 3048326 3048365 -63619640 + (TG)n Simple_repeat Simple_repeat 1 39 0 1373 183 97 25 chr20 3048365 3048481 -63619524 - AluJb SINE Alu -162 150 1 929 246 42 0 chr20 3048527 3048742 -63619263 + MER58A DNA MER1_type 1 224 0 668 137 11 0 chr20 3048797 3048892 -63619113 + FLAM_C SINE Alu 13 108 -35 196 51 26 26 chr20 3048899 3048938 -63619067 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 2290 107 13 7 chr20 3049101 3049411 -63618594 + AluSx SINE Alu 1 312 0 2067 98 0 73 chr20 3049477 3049792 -63618213 + AluSg SINE Alu 1 292 -18 2137 123 14 0 chr20 3049904 3050196 -63617809 + AluSx SINE Alu 1 296 -16 28 48 0 0 chr20 3050397 3050439 -63617566 + AT_rich Low_complexity Low_complexity 1 42 0 477 260 81 60 chr20 3050601 3050836 -63617169 - MIR SINE MIR -3 259 20 322 200 0 17 chr20 3050948 3051008 -63616997 + MIR3 SINE MIR 145 203 -5 1387 151 17 25 chr20 3051025 3051263 -63616742 - MER46A DNA MER2_type 0 236 1 758 236 149 65 chr20 3051390 3051678 -63616327 + HAL1 LINE L1 1745 2008 -499 1538 221 30 3 chr20 3051678 3051976 -63616029 + AluJb SINE Alu 1 306 -6 758 236 149 65 chr20 3051976 3052178 -63615827 + HAL1 LINE L1 2008 2276 -231 1211 144 0 0 chr20 3052180 3052361 -63615644 + AluSg/x SINE Alu 130 310 0 967 112 0 0 chr20 3052401 3052526 -63615479 + AluSq/x SINE Alu 12 136 -176 2165 112 3 3 chr20 3052526 3052820 -63615185 + AluSq SINE Alu 1 294 -19 319 235 0 0 chr20 3052850 3052918 -63615087 + HAL1 LINE L1 2440 2507 0 2194 116 7 10 chr20 3053452 3053755 -63614250 - AluSx SINE Alu -10 302 1 752 171 8 0 chr20 3054268 3054397 -63613608 + FLAM_C SINE Alu 11 140 -3 1509 104 5 205 chr20 3055174 3055549 -63612456 - AluJb SINE Alu -12 300 1 310 51 0 0 chr20 3055731 3055770 -63612235 + (TTTA)n Simple_repeat Simple_repeat 2 100 0 2208 60 0 3 chr20 3055770 3056052 -63611953 - AluY SINE Alu -1 319 1 437 259 0 9 chr20 3056573 3056685 -63611320 + MER5A DNA MER1_type 4 114 -75 313 315 46 23 chr20 3056728 3056858 -63611147 - MIR SINE MIR -67 195 63 2173 64 3 74 chr20 3057344 3057670 -63610335 + AluSx SINE Alu 3 305 -7 812 141 0 63 chr20 3057762 3057904 -63610101 - AluJo SINE Alu -178 134 2 1129 156 0 0 chr20 3057947 3058114 -63609891 - AluJb SINE Alu -16 296 130 227 125 0 0 chr20 3058125 3058157 -63609848 + Alu SINE Alu 1 32 -269 1428 101 10 19 chr20 3058161 3058368 -63609637 + AluSg/x SINE Alu 75 279 -31 382 218 100 9 chr20 3059072 3059182 -63608823 + MLT1L LTR MaLR 168 287 -328 31 0 0 0 chr20 3059972 3060003 -63608002 + AT_rich Low_complexity Low_complexity 1 31 0 288 0 0 0 chr20 3064709 3064741 -63603264 + (CAGCT)n Simple_repeat Simple_repeat 3 34 0 271 345 17 9 chr20 3065170 3065286 -63602719 + MIR SINE MIR 63 179 -83 428 217 217 0 chr20 3066377 3066520 -63601485 - MER96 DNA MER1_type? -1 174 1 1990 136 3 7 chr20 3066875 3067183 -63600822 + AluSx SINE Alu 1 307 -5 2178 87 13 3 chr20 3067487 3067785 -63600220 + AluSx SINE Alu 2 302 -10 2033 126 0 10 chr20 3067791 3068100 -63599905 + AluSx SINE Alu 6 311 -1 1096 97 30 18 chr20 3068795 3068960 -63599045 + AluSg/x SINE Alu 133 299 -11 226 365 0 0 chr20 3069382 3069478 -63598527 + L2 LINE L2 2651 2746 -568 201 326 90 0 chr20 3069495 3069584 -63598421 + MIR SINE MIR 16 112 -96 25 65 0 0 chr20 3070808 3070854 -63597151 + GC_rich Low_complexity Low_complexity 1 46 0 368 286 203 12 chr20 3072236 3072477 -63595528 - HAL1b LINE L1 -626 722 436 1953 91 43 11 chr20 3073155 3073431 -63594574 - AluSg SINE Alu 0 310 26 189 0 0 0 chr20 3073476 3073497 -63594508 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 1924 121 17 3 chr20 3073542 3073832 -63594173 - AluSx SINE Alu -18 294 1 1685 166 0 20 chr20 3073947 3074073 -63593932 + AluJb SINE Alu 12 139 -173 2164 125 0 6 chr20 3074073 3074386 -63593619 + AluSx SINE Alu 1 311 -1 1685 166 0 20 chr20 3074386 3074554 -63593451 + AluJb SINE Alu 139 300 -12 262 320 0 0 chr20 3074652 3074749 -63593256 + L1 LINE L1 3609 3705 -2441 1913 150 3 7 chr20 3074971 3075278 -63592727 + AluSx SINE Alu 1 306 -6 253 258 0 0 chr20 3075288 3075350 -63592655 - L1MC/D LINE L1 -2254 5531 5470 2335 190 48 7 chr20 3075350 3075813 -63592192 - LTR53 LTR ERVL 0 519 38 1786 151 3 22 chr20 3075823 3076141 -63591864 - AluSq SINE Alu -1 312 1 560 301 74 45 chr20 3076154 3076490 -63591515 + L1MC4a LINE L1 5539 5884 -1924 23 33 0 0 chr20 3076530 3076560 -63591445 + AT_rich Low_complexity Low_complexity 1 30 0 2160 113 0 19 chr20 3076591 3076902 -63591103 - AluSx SINE Alu -7 305 1 1182 157 52 30 chr20 3077054 3077284 -63590721 - AluJo SINE Alu -69 243 9 35 0 0 0 chr20 3077385 3077420 -63590585 + AT_rich Low_complexity Low_complexity 1 35 0 1856 192 57 65 chr20 3077441 3077946 -63590059 + MLT1D LTR MaLR 5 505 0 2156 94 11 0 chr20 3078044 3078330 -63589675 + AluSx SINE Alu 1 289 -23 606 28 0 0 chr20 3078331 3078403 -63589602 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 21 36 0 0 chr20 3078403 3078431 -63589574 + AT_rich Low_complexity Low_complexity 1 28 0 2233 102 3 0 chr20 3078860 3079163 -63588842 - AluSx SINE Alu -8 304 1 2172 97 0 34 chr20 3079218 3079566 -63588439 + AluSx SINE Alu 1 312 0 1939 123 10 10 chr20 3079854 3080146 -63587859 - AluJb SINE Alu -17 295 4 1242 118 14 59 chr20 3080158 3080195 -63587810 + AluSg/x SINE Alu 98 135 -177 2138 110 0 7 chr20 3080195 3080494 -63587511 + AluSp SINE Alu 1 297 -16 1242 118 14 59 chr20 3080494 3080677 -63587328 + AluSg/x SINE Alu 135 308 -4 485 304 149 0 chr20 3081282 3081496 -63586509 - MER112 DNA MER1_type -9 251 6 2419 50 0 3 chr20 3082003 3082300 -63585705 + AluY SINE Alu 1 296 -15 1719 151 7 43 chr20 3082472 3082777 -63585228 + AluJo SINE Alu 1 294 -18 1799 162 3 3 chr20 3083000 3083296 -63584709 + AluJb SINE Alu 1 296 -16 2337 89 0 6 chr20 3083296 3083609 -63584396 + AluY SINE Alu 1 311 0 304 114 0 0 chr20 3083944 3083988 -63584017 + Alu SINE Alu 1 44 -256 1543 76 22 31 chr20 3083988 3084211 -63583794 + AluSg/x SINE Alu 90 310 0 2245 88 7 3 chr20 3084259 3084566 -63583439 + AluSg SINE Alu 1 308 -2 2396 61 0 0 chr20 3084568 3084900 -63583105 + AluY SINE Alu 1 311 0 1938 134 0 3 chr20 3085030 3085320 -63582685 + AluSx SINE Alu 1 289 -23 1944 123 14 0 chr20 3085352 3085645 -63582360 + AluSx SINE Alu 1 297 -15 2103 81 42 0 chr20 3085732 3086016 -63581989 + AluSx SINE Alu 1 296 -16 533 186 143 56 chr20 3086475 3086636 -63581369 - MER5B DNA MER1_type -3 175 1 255 31 0 0 chr20 3089251 3089283 -63578722 + (CA)n Simple_repeat Simple_repeat 2 33 0 321 283 83 0 chr20 3089557 3089677 -63578328 - L2 LINE L2 -21 3251 3122 482 188 0 0 chr20 3090349 3090429 -63577576 + FRAM/FAM SINE Alu 1 73 -103 2267 97 0 0 chr20 3090649 3090947 -63577058 - AluSx SINE Alu -12 300 3 210 280 236 43 chr20 3092902 3093559 -63574446 + L2 LINE L2 1706 2489 -825 2408 50 0 13 chr20 3093674 3093976 -63574029 + AluY SINE Alu 1 298 -13 1860 174 144 104 chr20 3093984 3094219 -63573786 + L1MC3 LINE L1 6784 7008 -777 2369 88 0 0 chr20 3094219 3094527 -63573478 + AluSx SINE Alu 1 308 -4 1860 174 144 104 chr20 3094527 3094604 -63573401 + L1MC3 LINE L1 7008 7081 -704 246 241 0 0 chr20 3094604 3094658 -63573347 + MLT1F1 LTR MaLR 62 115 -452 1860 174 144 104 chr20 3094658 3094926 -63573079 + L1MC3 LINE L1 7081 7447 -338 1949 134 27 0 chr20 3094926 3095218 -63572787 + AluSx SINE Alu 1 300 -12 1860 174 144 104 chr20 3095218 3095242 -63572763 + L1MC3 LINE L1 7447 7469 -316 887 119 119 25 chr20 3095245 3095404 -63572601 + FRAM SINE Alu 1 171 -5 2139 102 7 0 chr20 3095404 3095698 -63572307 + AluSc SINE Alu 1 296 -13 2329 96 3 0 chr20 3095698 3096009 -63571996 + AluSp SINE Alu 1 313 0 863 202 37 49 chr20 3096010 3096138 -63571867 + L1MC3 LINE L1 6144 6272 -1513 1624 178 0 41 chr20 3096138 3096453 -63571552 + AluJb SINE Alu 1 302 -10 863 202 37 49 chr20 3096453 3096576 -63571429 + L1MC3 LINE L1 6272 7703 -82 188 214 71 102 chr20 3096904 3097002 -63571003 + L2 LINE L2 2763 2857 -457 263 228 89 40 chr20 3097005 3097106 -63570899 + LTR16A1 LTR ERVL 332 437 -20 2325 65 0 19 chr20 3097974 3098107 -63569898 + AluY SINE Alu 1 135 -176 2209 114 0 0 chr20 3098107 3098413 -63569592 + AluY SINE Alu 1 306 -5 2325 65 0 19 chr20 3098413 3098588 -63569417 + AluY SINE Alu 135 303 -8 1002 112 0 106 chr20 3098588 3098776 -63569229 + AluY SINE Alu 133 300 -11 2291 77 0 16 chr20 3098928 3099240 -63568765 - AluY SINE Alu -4 307 1 2053 74 88 0 chr20 3099249 3099532 -63568473 - AluY SINE Alu -3 308 1 2322 45 14 3 chr20 3102139 3102426 -63565579 - AluSg SINE Alu -18 292 3 207 0 0 0 chr20 3102595 3102618 -63565387 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 186 43 0 0 chr20 3102622 3102645 -63565360 + (GGGGA)n Simple_repeat Simple_repeat 1 23 0 1682 158 37 3 chr20 3102707 3103005 -63565000 + AluJb SINE Alu 1 308 -4 2092 134 0 3 chr20 3103051 3103364 -63564641 + AluSx SINE Alu 1 312 0 2230 102 3 0 chr20 3103385 3103690 -63564315 + AluSx SINE Alu 1 306 -6 1856 151 0 43 chr20 3103690 3103827 -63564178 + AluSx SINE Alu 2 143 -169 2370 71 7 3 chr20 3103827 3104135 -63563870 + AluY SINE Alu 1 309 -2 1856 151 0 43 chr20 3104135 3104322 -63563683 + AluSx SINE Alu 143 312 0 1451 154 8 8 chr20 3104365 3104612 -63563393 - AluJb SINE Alu -8 304 58 2020 112 0 3 chr20 3104690 3104998 -63563007 + AluSx SINE Alu 1 307 0 2092 116 0 3 chr20 3105000 3105302 -63562703 + AluSg SINE Alu 8 308 -2 1850 127 14 14 chr20 3105657 3105948 -63562057 - AluSp SINE Alu -16 297 7 237 263 0 18 chr20 3105949 3106006 -63561999 - MER5A DNA MER1_type -6 183 128 202 315 22 43 chr20 3107357 3107449 -63560556 + MIR SINE MIR 118 207 -55 1798 154 13 19 chr20 3159301 3159613 -63508392 - AluJb SINE Alu 0 312 3 1880 138 0 40 chr20 3160075 3160400 -63507605 + AluSx SINE Alu 1 312 0 270 0 0 0 chr20 3162938 3162968 -63505037 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 405 0 0 0 chr20 3162967 3163012 -63504993 + (CA)n Simple_repeat Simple_repeat 1 45 0 1854 48 0 52 chr20 3163988 3164239 -63503766 + AluY SINE Alu 37 274 -37 315 0 0 0 chr20 3164239 3164274 -63503731 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 295 109 16 62 chr20 3166493 3166557 -63501448 - MER45 DNA AcHobo -56 122 62 22 0 0 0 chr20 3166979 3167001 -63501004 + GC_rich Low_complexity Low_complexity 1 22 0 1808 160 0 3 chr20 3169098 3169391 -63498614 + AluJb SINE Alu 1 292 -20 338 243 141 40 chr20 3169394 3169420 -63498585 + L2 LINE L2 1689 1711 -1603 2116 92 0 23 chr20 3169420 3169725 -63498280 + AluSc SINE Alu 1 298 -11 338 243 141 40 chr20 3169725 3169875 -63498130 + L2 LINE L2 1711 1883 -1431 771 150 0 30 chr20 3169929 3170062 -63497943 + FLAM_A SINE Alu 2 130 -3 1226 167 36 113 chr20 3170261 3170596 -63497409 - AluJb SINE Alu -3 309 1 1914 80 8 0 chr20 3170598 3170849 -63497156 - AluY SINE Alu -8 303 51 349 103 35 0 chr20 3170849 3170907 -63497098 - AluSq/x SINE Alu -158 145 86 1238 156 5 22 chr20 3170907 3171131 -63496874 - AluJo SINE Alu -92 220 1 863 237 16 5 chr20 3171134 3171324 -63496681 - AluJb SINE Alu 0 312 121 1275 172 0 29 chr20 3171734 3171978 -63496027 - AluJo SINE Alu -17 295 59 25 0 0 0 chr20 3173230 3173255 -63494750 + AT_rich Low_complexity Low_complexity 1 25 0 2325 94 0 0 chr20 3173634 3173942 -63494063 - AluSg SINE Alu -1 309 2 2329 87 0 3 chr20 3173943 3174252 -63493753 - AluSx SINE Alu -4 308 1 1449 170 62 4 chr20 3174386 3174662 -63493343 + AluJb SINE Alu 1 292 -20 1094 152 6 6 chr20 3174668 3174846 -63493159 + FRAM SINE Alu 1 175 -1 1862 139 6 29 chr20 3174846 3175162 -63492843 + AluSx SINE Alu 1 309 -3 349 233 121 17 chr20 3175280 3175396 -63492609 + MLT1K LTR MaLR 156 283 -305 22 0 0 0 chr20 3177048 3177070 -63490935 + AT_rich Low_complexity Low_complexity 1 22 0 790 153 0 0 chr20 3180699 3180817 -63487188 + AluJo/FLAM SINE Alu 1 118 -184 2215 98 3 13 chr20 3180817 3181133 -63486872 + AluSp SINE Alu 1 313 0 2288 107 0 0 chr20 3181728 3182036 -63485969 - AluSx SINE Alu -4 308 1 488 286 8 8 chr20 3182039 3182172 -63485833 + LTR16C LTR ERVL 346 478 -13 920 155 0 0 chr20 3184026 3184168 -63483837 + FRAM SINE Alu 4 145 -31 217 317 72 56 chr20 3184211 3184391 -63483614 - L2 LINE L2 -831 2483 2301 573 211 49 49 chr20 3184543 3184685 -63483320 + FLAM_A SINE Alu 1 142 0 1829 167 3 3 chr20 3184887 3185198 -63482807 + AluJb SINE Alu 1 311 -1 2177 98 0 16 chr20 3185200 3185368 -63482637 - AluSx SINE Alu -11 301 139 1983 104 3 79 chr20 3185368 3185686 -63482319 - AluSq SINE Alu -19 294 1 2177 98 0 16 chr20 3185686 3185823 -63482182 - AluSx SINE Alu -173 139 1 291 366 14 7 chr20 3186253 3186395 -63481610 + MLT1L LTR MaLR 341 483 -132 327 337 64 32 chr20 3186480 3186667 -63481338 + L2 LINE L2 2849 3041 -231 2650 13 0 0 chr20 3187715 3188014 -63479991 + AluYb8 SINE Alu 1 299 -19 1988 142 0 7 chr20 3188286 3188589 -63479416 - AluSx SINE Alu -11 301 1 1634 172 21 3 chr20 3188709 3188994 -63479011 - AluJb SINE Alu -22 290 1 2237 98 3 0 chr20 3188996 3189007 -63478998 - AluSg SINE Alu -3 307 298 198 0 0 0 chr20 3189007 3189029 -63478976 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 2237 98 3 0 chr20 3189029 3189323 -63478682 - AluSg SINE Alu -12 298 1 2279 89 7 0 chr20 3189903 3190206 -63477799 - AluSq SINE Alu -8 305 1 2446 81 0 0 chr20 3190621 3190931 -63477074 - AluY SINE Alu -1 310 1 520 279 75 10 chr20 3191130 3191331 -63476674 + MIR SINE MIR 3 216 -46 934 191 36 21 chr20 3191331 3191525 -63476480 + MER3 DNA MER1_type 1 197 -12 2238 101 0 0 chr20 3192227 3192525 -63475480 - AluSc SINE Alu -11 298 1 500 251 21 37 chr20 3192543 3192730 -63475275 - L1MC4 LINE L1 -94 7948 7765 413 188 180 23 chr20 3192737 3192865 -63475140 + MER5A DNA MER1_type 39 186 -3 2322 76 0 31 chr20 3192940 3193257 -63474748 + AluSx SINE Alu 1 307 -5 2279 97 0 7 chr20 3193328 3193637 -63474368 - AluSq SINE Alu -6 307 1 2584 240 48 56 chr20 3193648 3194123 -63473882 - L1MC4 LINE L1 -262 7627 7149 2254 77 0 22 chr20 3194123 3194434 -63473571 - AluY SINE Alu -7 304 1 2584 240 48 56 chr20 3194434 3194513 -63473492 - L1MC4 LINE L1 -740 7149 7071 2225 101 3 0 chr20 3194513 3194809 -63473196 - AluSp SINE Alu -16 297 1 2584 240 48 56 chr20 3194809 3195246 -63472759 - L1MC4 LINE L1 -818 7071 6555 1752 141 0 0 chr20 3195246 3195508 -63472497 + AluSx SINE Alu 37 298 -14 2584 240 48 56 chr20 3195508 3195573 -63472432 - L1MC4 LINE L1 -1334 6555 6491 354 233 133 52 chr20 3195584 3195675 -63472330 - L1MC4a LINE L1 -1476 6332 6250 2218 98 0 19 chr20 3195675 3195992 -63472013 - AluSq SINE Alu -2 311 1 2114 110 3 0 chr20 3195994 3196284 -63471721 - AluSg SINE Alu -19 291 1 354 233 133 52 chr20 3196284 3196399 -63471606 - L1MC4a LINE L1 -1558 6250 6106 2072 97 13 26 chr20 3196555 3196864 -63471141 - AluY SINE Alu -6 305 1 1313 178 55 31 chr20 3196866 3197158 -63470847 - AluJo SINE Alu -13 299 1 2439 40 0 13 chr20 3197330 3197629 -63470376 + AluY SINE Alu 1 295 -16 788 167 24 0 chr20 3197665 3197791 -63470214 - FLAM_C SINE Alu -4 129 1 1081 129 0 29 chr20 3197794 3197964 -63470041 - FRAM SINE Alu -1 165 1 2254 103 0 0 chr20 3198468 3198770 -63469235 - AluSx SINE Alu -10 302 1 2168 110 10 0 chr20 3199266 3199576 -63468429 - AluSp SINE Alu 0 313 1 732 221 136 34 chr20 3199580 3199933 -63468072 - L1MC5 LINE L1 -36 7925 7537 1455 132 0 17 chr20 3199951 3200186 -63467819 - AluJb SINE Alu -81 231 1 307 366 40 0 chr20 3200202 3200303 -63467702 - HAL1 LINE L1 -146 2361 2257 350 201 132 14 chr20 3200311 3200455 -63467550 - HAL1b LINE L1 -509 839 679 2123 98 3 29 chr20 3200471 3200786 -63467219 - AluSp SINE Alu -4 309 3 2539 151 34 14 chr20 3201001 3201419 -63466586 - MSTB LTR MaLR 0 426 1 2119 129 0 0 chr20 3201791 3202100 -63465905 - AluSx SINE Alu -3 309 1 372 318 13 33 chr20 3202140 3202291 -63465714 + MIR SINE MIR 7 154 -108 287 328 195 20 chr20 3204573 3204978 -63463027 + L2 LINE L2 1525 2000 -1314 431 321 53 50 chr20 3205040 3205342 -63462663 + L2 LINE L2 2244 2546 -768 2214 108 0 0 chr20 3206096 3206391 -63461614 + AluSg SINE Alu 1 295 -15 252 351 77 50 chr20 3207267 3207489 -63460516 - MIR SINE MIR -4 258 31 400 228 61 61 chr20 3207609 3207723 -63460282 - MARNA DNA Mariner -207 379 266 2109 96 0 7 chr20 3207958 3208240 -63459765 + AluSp SINE Alu 21 300 -13 1616 161 18 7 chr20 3208286 3208572 -63459433 - AluJo SINE Alu -23 289 1 257 204 32 32 chr20 3208582 3208675 -63459330 - HAL1b LINE L1 -575 773 681 2106 108 0 14 chr20 3208690 3208986 -63459019 - AluSx SINE Alu -20 292 1 189 234 21 0 chr20 3209880 3209927 -63458078 + L2 LINE L2 2233 2280 -1034 1530 277 66 13 chr20 3210012 3210669 -63457336 + L2 LINE L2 2521 3202 -111 2013 122 0 3 chr20 3211831 3212127 -63455878 - AluJb SINE Alu -5 307 13 1121 187 101 8 chr20 3212457 3212517 -63455488 - L1MD2 LINE L1 -177 6182 6129 222 37 0 0 chr20 3212517 3212544 -63455461 + (TG)n Simple_repeat Simple_repeat 2 28 0 1121 187 101 8 chr20 3212544 3212755 -63455250 - L1MD2 LINE L1 -230 6129 5919 811 145 8 0 chr20 3212923 3213047 -63454958 + FLAM_C SINE Alu 2 126 -7 2262 94 0 0 chr20 3213056 3213353 -63454652 + AluSx SINE Alu 3 299 -13 2214 115 0 3 chr20 3213354 3213667 -63454338 + AluSx SINE Alu 1 312 0 2176 94 3 3 chr20 3215825 3216123 -63451882 + AluSp SINE Alu 1 298 -15 474 269 117 0 chr20 3216569 3216714 -63451291 + L2 LINE L2 2911 3072 -241 1225 235 7 7 chr20 3216729 3216854 -63451151 + AluJo SINE Alu 7 131 -181 723 82 0 0 chr20 3216854 3216952 -63451053 + L1PA4 LINE L1 6054 6151 -4 1225 235 7 7 chr20 3216952 3217120 -63450885 + AluJo SINE Alu 130 300 -12 1747 161 26 0 chr20 3217165 3217469 -63450536 - AluJb SINE Alu 0 312 1 645 259 78 21 chr20 3217473 3217666 -63450339 + L2 LINE L2 3107 3310 -3 475 249 259 25 chr20 3217930 3218131 -63449874 + MIR SINE MIR 13 260 -2 2316 90 0 0 chr20 3218445 3218746 -63449259 - AluSx SINE Alu -11 301 1 2391 66 3 3 chr20 3218995 3219299 -63448706 - AluSc SINE Alu -5 304 1 2114 105 0 3 chr20 3219660 3219955 -63448050 - AluSx SINE Alu -16 296 3 2151 106 3 0 chr20 3220142 3220443 -63447562 + AluSx SINE Alu 1 302 -10 1795 117 19 62 chr20 3220443 3220749 -63447256 + AluSx SINE Alu 1 294 -18 1718 74 0 4 chr20 3220748 3220977 -63447028 + AluSg/x SINE Alu 80 307 -3 * 2124 87 49 0 chr20 3221060 3221348 -63446657 + AluSx SINE Alu 1 302 -10 2378 54 0 14 chr20 3222531 3222826 -63445179 - AluY SINE Alu -20 291 1 2081 102 3 23 chr20 3222831 3223136 -63444869 - AluSx SINE Alu -13 299 1 564 189 90 0 chr20 3223811 3223922 -63444083 + AluJb SINE Alu 158 278 -34 1654 188 3 13 chr20 3224035 3224338 -63443667 - AluJo SINE Alu -12 300 1 1500 143 91 8 chr20 3226007 3226272 -63441733 - AluJo SINE Alu -20 292 6 3130 220 27 48 chr20 3226325 3226565 -63441440 - L1M4 LINE L1 -884 5262 5018 2036 101 0 0 chr20 3226565 3226841 -63441164 - AluSg SINE Alu -11 299 24 3130 220 27 48 chr20 3226841 3226962 -63441043 - L1M4 LINE L1 -1128 5018 4896 1830 124 10 26 chr20 3226962 3227269 -63440736 - AluSq SINE Alu -11 302 1 3130 220 27 48 chr20 3227269 3227559 -63440446 - L1M4 LINE L1 -1250 4896 4632 1862 159 0 7 chr20 3227559 3227860 -63440145 - AluSx SINE Alu -12 300 2 3130 220 27 48 chr20 3227860 3228109 -63439896 - L1M4 LINE L1 -1514 4632 4379 837 189 6 18 chr20 3228109 3228278 -63439727 - AluJb SINE Alu -15 297 131 317 54 0 0 chr20 3228298 3228387 -63439618 + Alu SINE Alu 244 332 0 716 133 88 0 chr20 3228387 3228500 -63439505 - AluJb SINE Alu -188 124 2 345 179 0 0 chr20 3228502 3228569 -63439436 - L1M4 LINE L1 -1763 4383 4317 970 193 0 0 chr20 3228665 3228836 -63439169 - AluJo/FRAM SINE Alu -5 307 137 2251 107 0 0 chr20 3228836 3229145 -63438860 - AluSq SINE Alu -4 309 1 186 43 0 0 chr20 3229594 3229617 -63438388 + (TA)n Simple_repeat Simple_repeat 2 24 0 1863 129 21 0 chr20 3229617 3229896 -63438109 - AluSx SINE Alu -27 285 1 1359 152 104 11 chr20 3229908 3230177 -63437828 - L1MA6 LINE L1 0 6300 6007 1050 205 40 29 chr20 3230219 3230497 -63437508 + L1ME1 LINE L1 5768 6048 -118 2317 73 0 13 chr20 3230614 3230915 -63437090 + AluY SINE Alu 1 297 -14 31 68 0 0 chr20 3231001 3231060 -63436945 + AT_rich Low_complexity Low_complexity 1 59 0 372 304 67 41 chr20 3234088 3234282 -63433723 - MIR SINE MIR -33 229 31 198 0 0 0 chr20 3235625 3235647 -63432358 + (A)n Simple_repeat Simple_repeat 1 22 0 412 228 41 41 chr20 3235842 3235987 -63432018 - L1ME3A LINE L1 -219 5951 5807 2224 96 0 3 chr20 3236000 3236302 -63431703 - AluSx SINE Alu -11 301 1 937 156 0 12 chr20 3236353 3236513 -63431492 + AluSx SINE Alu 1 158 -154 788 180 49 22 chr20 3236536 3236719 -63431286 - MLT1A2 LTR MaLR -179 195 8 277 269 65 87 chr20 3236727 3237002 -63431003 - L1ME3A LINE L1 -1419 4727 4459 537 152 22 0 chr20 3237002 3237094 -63430911 + MLT1A2 LTR MaLR 281 374 0 711 274 151 12 chr20 3237148 3237571 -63430434 + L1ME3A LINE L1 4801 5282 -864 1961 123 17 0 chr20 3237571 3237864 -63430141 + AluSp SINE Alu 1 298 -15 884 99 12 25 chr20 3237888 3238050 -63429955 + (GAAA)n Simple_repeat Simple_repeat 4 163 0 2209 104 0 0 chr20 3238061 3238359 -63429646 + AluSx SINE Alu 1 298 -14 937 245 95 89 chr20 3238361 3238806 -63429199 + L1ME3A LINE L1 5280 5721 -449 1512 144 59 0 chr20 3238806 3239062 -63428943 - AluJo SINE Alu -19 293 23 937 245 95 89 chr20 3239062 3239082 -63428923 + L1ME3A LINE L1 5721 5739 -431 743 191 0 8 chr20 3239082 3239208 -63428797 - FLAM_A SINE Alu -8 125 1 937 245 95 89 chr20 3239208 3239395 -63428610 + L1ME3A LINE L1 5739 5937 -233 2294 88 7 0 chr20 3239638 3239946 -63428059 - AluSp SINE Alu -3 310 1 495 188 91 91 chr20 3240256 3240432 -63427573 + MER69A DNA AcHobo 2 177 0 521 234 0 9 chr20 3241267 3241378 -63426627 + MLT1-int LTR MaLR 772 881 -490 736 216 102 131 chr20 3241464 3241974 -63426031 + MLT1-int LTR MaLR 877 1371 0 1594 217 73 18 chr20 3242003 3242385 -63425620 + MLT1E2 LTR MaLR 215 617 -9 323 239 35 20 chr20 3243991 3244124 -63423881 + MIR SINE MIR 23 146 -62 1933 139 0 0 chr20 3244546 3244833 -63423172 - AluSx SINE Alu -5 307 21 1345 139 9 5 chr20 3244833 3245040 -63422965 + AluJb SINE Alu 93 303 -9 333 229 24 109 chr20 3245199 3245265 -63422740 - L1MC/D LINE L1 -795 5351 5450 2231 97 0 0 chr20 3245265 3245555 -63422450 - AluSx SINE Alu -22 290 1 333 229 24 109 chr20 3245555 3245745 -63422260 - L1MC/D LINE L1 -695 5451 5246 413 152 0 13 chr20 3245757 3245836 -63422169 - AluJ/FRAM SINE Alu -8 304 227 1650 144 62 17 chr20 3246340 3246453 -63421552 + AluJo SINE Alu 6 112 -200 2219 114 0 13 chr20 3246453 3246769 -63421236 + AluSx SINE Alu 1 312 0 1650 144 62 17 chr20 3246769 3246946 -63421059 + AluJo SINE Alu 112 309 -3 205 373 91 18 chr20 3247734 3247844 -63420161 - L2 LINE L2 -16 3256 3139 2158 153 18 0 chr20 3248858 3249199 -63418806 - MER7A DNA MER2_type -1 345 1 1185 164 17 30 chr20 3249223 3249454 -63418551 - AluJo SINE Alu -10 302 75 2145 124 3 0 chr20 3250931 3251237 -63416768 - AluSx SINE Alu -5 307 1 186 305 73 0 chr20 3251538 3251620 -63416385 - MIR SINE MIR -128 134 47 1687 158 0 51 chr20 3254106 3254422 -63413583 + AluJb SINE Alu 1 300 -12 925 118 71 164 chr20 3254841 3255079 -63412926 - MER20 DNA MER1_type -3 216 1 366 343 87 17 chr20 3255261 3255433 -63412572 - MIR3 SINE MIR -16 192 9 2075 109 0 23 chr20 3255840 3256143 -63411862 - AluSg SINE Alu -14 296 1 263 135 19 0 chr20 3256482 3256520 -63411485 + (CA)n Simple_repeat Simple_repeat 2 43 -11 2231 109 0 0 chr20 3256520 3256824 -63411181 - AluSx SINE Alu -6 306 3 263 135 19 0 chr20 3256824 3256837 -63411168 + (CA)n Simple_repeat Simple_repeat 43 54 0 1505 163 43 4 chr20 3256837 3257113 -63410892 - AluJb SINE Alu -25 287 1 299 323 31 10 chr20 3257242 3257338 -63410667 - MER5A DNA MER1_type -52 137 40 1576 166 34 7 chr20 3257901 3258196 -63409809 - AluJo SINE Alu -8 304 2 2236 97 3 0 chr20 3258448 3258747 -63409258 - AluSx SINE Alu -12 300 1 22 0 0 0 chr20 3258915 3258937 -63409068 + AT_rich Low_complexity Low_complexity 1 22 0 2102 140 0 0 chr20 3259330 3259630 -63408375 - AluSx SINE Alu -12 300 1 1988 145 0 32 chr20 3260110 3260420 -63407585 - AluSx SINE Alu -12 300 1 512 100 12 0 chr20 3260514 3260594 -63407411 + (TG)n Simple_repeat Simple_repeat 1 81 0 404 291 66 38 chr20 3261789 3262002 -63406003 + L2 LINE L2 2181 2399 -915 2322 143 117 29 chr20 3262002 3262448 -63405557 - L1MC1 LINE L1 -434 5899 5415 238 303 192 0 chr20 3262565 3262664 -63405341 + L2 LINE L2 3155 3272 0 4017 173 43 59 chr20 3262836 3263131 -63404874 - L1MDa LINE L1 -4471 2069 1771 2490 82 0 0 chr20 3263131 3263435 -63404570 + AluSq SINE Alu 1 304 -9 4017 173 43 59 chr20 3263435 3263497 -63404508 - L1MDa LINE L1 -4769 1771 1710 2176 130 0 0 chr20 3263497 3263789 -63404216 + AluSx SINE Alu 1 292 -20 4017 173 43 59 chr20 3263789 3264210 -63403795 - L1MDa LINE L1 -4830 1710 1284 2025 111 31 7 chr20 3264210 3264499 -63403506 - AluSq SINE Alu -17 296 1 4017 173 43 59 chr20 3264499 3264527 -63403478 - L1MDa LINE L1 -5256 1284 1257 2479 78 3 0 chr20 3264527 3264835 -63403170 - AluY SINE Alu -2 309 1 4017 173 43 59 chr20 3264835 3264925 -63403080 - L1MDa LINE L1 -5283 1257 1167 1526 111 0 75 chr20 3264925 3265178 -63402827 - AluY SINE Alu -17 294 61 4017 173 43 59 chr20 3265178 3265318 -63402687 - L1MDa LINE L1 -5373 1167 1045 * 4032 204 72 45 chr20 3265314 3266305 -63401700 - L1MCb LINE L1 -4196 2368 1307 2451 82 0 3 chr20 3266305 3266610 -63401395 - AluSq SINE Alu -9 304 1 4032 204 72 45 chr20 3266610 3267408 -63400597 - L1MCb LINE L1 -5257 1307 532 1056 161 0 0 chr20 3267410 3267572 -63400433 + AluJb SINE Alu 147 308 -4 360 218 69 90 chr20 3268819 3269007 -63398998 + L2 LINE L2 1812 1995 -1319 607 317 156 27 chr20 3269137 3269445 -63398560 + L2 LINE L2 2362 2629 -685 2186 44 0 0 chr20 3269445 3269694 -63398311 - AluY SINE Alu -23 288 40 607 317 156 27 chr20 3269694 3269905 -63398100 + L2 LINE L2 2629 2948 -366 235 292 82 62 chr20 3269982 3270177 -63397828 + L2 LINE L2 3105 3303 -10 512 243 21 0 chr20 3270622 3270762 -63397243 - L1 LINE L1 -898 5248 5106 2153 95 57 0 chr20 3270820 3271103 -63396902 - AluSp SINE Alu -14 299 1 22 0 0 0 chr20 3271131 3271153 -63396852 + AT_rich Low_complexity Low_complexity 1 22 0 303 93 0 0 chr20 3271497 3271540 -63396465 + (TG)n Simple_repeat Simple_repeat 1 43 0 214 261 0 0 chr20 3271641 3271706 -63396299 + A-rich Low_complexity Low_complexity 1 65 0 627 270 176 32 chr20 3272028 3272237 -63395768 - L1ME4a LINE L1 0 6121 5943 519 17 0 0 chr20 3272237 3272297 -63395708 + (CA)n Simple_repeat Simple_repeat 2 61 0 627 270 176 32 chr20 3272297 3272651 -63395354 - L1ME4a LINE L1 -178 5943 5330 1722 139 4 4 chr20 3272674 3272926 -63395079 - AluSq SINE Alu -12 301 50 561 271 101 0 chr20 3272982 3273181 -63394824 - MIR SINE MIR -1 261 43 261 294 134 35 chr20 3273191 3273504 -63394501 + L1MC4a LINE L1 4943 5286 -860 715 46 0 0 chr20 3273512 3273599 -63394406 + AluSc SINE Alu 202 288 -21 2451 225 73 53 chr20 3273657 3274479 -63393526 + L1MC4a LINE L1 5310 6147 -1661 1389 250 21 114 chr20 3274484 3275147 -63392858 + L1M4 LINE L1 1451 2174 -4651 319 77 0 0 chr20 3275147 3275186 -63392819 - U2 snRNA snRNA -149 39 1 1389 250 21 114 chr20 3275186 3275302 -63392703 + L1M4 LINE L1 2174 2343 -4482 2094 100 21 0 chr20 3275302 3275581 -63392424 + AluSx SINE Alu 1 285 -27 1389 250 21 114 chr20 3275581 3275601 -63392404 + L1M4 LINE L1 2343 2363 -4462 33 25 0 0 chr20 3276103 3276143 -63391862 + AT_rich Low_complexity Low_complexity 1 40 0 1236 199 151 19 chr20 3276412 3276724 -63391281 + L1MB8 LINE L1 5825 6177 -1 1493 165 0 89 chr20 3276728 3277043 -63390962 + AluJb SINE Alu 1 287 -25 182 204 136 0 chr20 3277565 3277609 -63390396 + L2 LINE L2 3212 3261 -11 471 60 0 0 chr20 3277781 3277848 -63390157 + (CA)n Simple_repeat Simple_repeat 2 68 0 907 113 8 0 chr20 3277854 3277978 -63390027 + AluJb SINE Alu 1 125 -187 1200 218 5 101 chr20 3278157 3278543 -63389462 + L1MC5 LINE L1 6615 6963 -998 209 135 27 0 chr20 3278543 3278580 -63389425 + (TA)n Simple_repeat Simple_repeat 1 38 0 871 219 36 86 chr20 3278623 3278867 -63389138 + L1MC5 LINE L1 7185 7407 -554 1849 142 35 3 chr20 3278867 3279156 -63388849 + AluSq SINE Alu 1 298 -15 871 219 36 86 chr20 3279156 3279272 -63388733 + L1MC5 LINE L1 7407 7527 -434 264 224 0 0 chr20 3279491 3279571 -63388434 - AluJ/monomer SINE Alu 0 314 235 1091 104 0 14 chr20 3279571 3279715 -63388290 - AluSq/x SINE Alu -171 142 1 488 265 100 9 chr20 3280206 3280384 -63387621 + MIR SINE MIR 40 230 -32 282 119 0 85 chr20 3280442 3280501 -63387504 + L1MC5 LINE L1 6907 6960 -1001 266 132 19 0 chr20 3280503 3280556 -63387449 + (TA)n Simple_repeat Simple_repeat 1 54 0 219 314 118 0 chr20 3280591 3280693 -63387312 - MIR SINE MIR -56 206 93 365 160 56 0 chr20 3280696 3280821 -63387184 + (TA)n Simple_repeat Simple_repeat 2 133 0 1388 172 76 8 chr20 3281020 3281282 -63386723 + AluJb SINE Alu 1 280 -32 263 322 35 0 chr20 3281746 3281833 -63386172 - MIR SINE MIR -114 148 59 2141 125 10 0 chr20 3282949 3283245 -63384760 + AluSx SINE Alu 1 299 -13 469 286 71 36 chr20 3283255 3283535 -63384470 - L1M4 LINE L1 -2201 3945 3656 2106 101 25 0 chr20 3283684 3283960 -63384045 - AluSx SINE Alu -15 297 15 2117 103 3 3 chr20 3284846 3285153 -63382852 + AluSx SINE Alu 1 307 0 200 148 0 66 chr20 3285287 3285348 -63382657 + (TTTTTA)n Simple_repeat Simple_repeat 2 58 0 604 129 0 69 chr20 3285352 3285453 -63382552 - AluSp/q SINE Alu -17 296 203 1354 157 14 5 chr20 3285453 3285669 -63382336 + AluJo SINE Alu 71 288 -24 29 0 0 0 chr20 3285669 3285698 -63382307 + AT_rich Low_complexity Low_complexity 1 29 0 373 241 88 122 chr20 3285698 3285945 -63382060 - HAL1b LINE L1 -840 508 271 2095 128 0 7 chr20 3285945 3286242 -63381763 - AluSx SINE Alu -17 295 1 373 241 88 122 chr20 3286242 3286289 -63381716 - HAL1b LINE L1 -1077 271 224 611 261 13 7 chr20 3286333 3286486 -63381519 + L1MC4 LINE L1 6701 6854 -1188 839 216 28 0 chr20 3286613 3286789 -63381216 + MER58A DNA MER1_type 42 222 -2 323 254 8 75 chr20 3287556 3287690 -63380315 - HAL1 LINE L1 -4 2503 2379 855 94 0 0 chr20 3287692 3287798 -63380207 + U6 snRNA snRNA 1 106 -1 21 0 0 0 chr20 3287799 3287820 -63380185 + AT_rich Low_complexity Low_complexity 1 21 0 441 248 99 0 chr20 3287820 3287981 -63380024 - HAL1 LINE L1 -115 2392 2216 534 193 0 0 chr20 3287989 3288072 -63379933 - AluJ/FLAM SINE Alu -228 84 2 317 299 84 26 chr20 3290009 3290163 -63377842 - HAL1 LINE L1 -345 2162 2000 740 172 147 73 chr20 3290205 3290409 -63377596 - MER20 DNA MER1_type 0 219 1 333 218 142 81 chr20 3290452 3290603 -63377402 - HAL1 LINE L1 -674 1833 1693 2328 103 0 0 chr20 3290603 3290905 -63377100 + AluSx SINE Alu 1 302 -10 333 218 142 81 chr20 3290905 3290926 -63377079 - HAL1 LINE L1 -814 1693 1675 216 0 0 0 chr20 3290926 3290950 -63377055 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 333 218 142 81 chr20 3290950 3290973 -63377032 - HAL1 LINE L1 -832 1675 1625 1232 126 0 0 chr20 3290974 3291148 -63376857 + AluSg/x SINE Alu 137 310 -2 21 36 0 0 chr20 3291188 3291216 -63376789 + AT_rich Low_complexity Low_complexity 1 28 0 980 109 13 26 chr20 3291227 3291383 -63376622 + BC200 scRNA scRNA 1 154 -46 3321 219 65 70 chr20 3291412 3291627 -63376378 - L1MEc LINE L1 -5217 1179 964 863 154 0 8 chr20 3291627 3291757 -63376248 - FLAM_A SINE Alu -4 129 1 3321 219 65 70 chr20 3291757 3292187 -63375818 - L1MEc LINE L1 -5432 964 533 15521 120 25 53 chr20 3292187 3292588 -63375417 - Tigger1 DNA MER2_type 0 2418 2007 1492 166 18 109 chr20 3292588 3292926 -63375079 - AluJo SINE Alu 0 312 6 15521 120 25 53 chr20 3292926 3293030 -63374975 - Tigger1 DNA MER2_type -411 2007 1902 315 0 0 0 chr20 3293030 3293065 -63374940 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2270 87 0 0 chr20 3293071 3293348 -63374657 - AluSx SINE Alu -35 277 1 15521 120 25 53 chr20 3293348 3294299 -63373706 - Tigger1 DNA MER2_type -521 1897 1050 2070 136 0 13 chr20 3294299 3294615 -63373390 + AluJb SINE Alu 1 312 0 15521 120 25 53 chr20 3294615 3295637 -63372368 - Tigger1 DNA MER2_type -1368 1050 1 3321 219 65 70 chr20 3295637 3296029 -63371976 - L1MEc LINE L1 -5863 533 146 2425 53 3 23 chr20 3296172 3296474 -63371531 - AluY SINE Alu -15 296 1 1915 123 20 3 chr20 3296508 3296800 -63371205 + AluSq SINE Alu 1 297 -16 389 251 105 111 chr20 3296800 3297037 -63370968 - HAL1 LINE L1 -1068 1439 1202 2125 118 3 3 chr20 3297037 3297333 -63370672 - AluSx SINE Alu -16 296 1 389 251 105 111 chr20 3297333 3297744 -63370261 - HAL1 LINE L1 -1305 1202 795 1404 134 79 66 chr20 3297898 3298072 -63369933 - AluJo SINE Alu -3 309 128 2242 106 0 0 chr20 3298072 3298364 -63369641 - AluSc SINE Alu -17 292 1 1404 134 79 66 chr20 3298364 3298494 -63369511 - AluJo SINE Alu -184 128 1 2697 23 0 3 chr20 3298990 3299298 -63368707 - AluY SINE Alu -3 308 2 826 263 62 9 chr20 3300315 3300539 -63367466 + MIR SINE MIR 8 243 -19 34 42 0 0 chr20 3300553 3300601 -63367404 + AT_rich Low_complexity Low_complexity 1 48 0 200 182 0 0 chr20 3301343 3301376 -63366629 + (TGGG)n Simple_repeat Simple_repeat 3 35 0 246 243 14 14 chr20 3302959 3303029 -63364976 + L1M4 LINE L1 4959 5028 -1118 2081 116 42 0 chr20 3303234 3303519 -63364486 + AluSx SINE Alu 1 297 -15 4624 137 52 43 chr20 3304110 3304439 -63363566 - MER4D LTR ERV1 0 865 541 2417 78 0 19 chr20 3304439 3304747 -63363258 + AluSg SINE Alu 1 302 -8 4624 137 52 43 chr20 3304747 3305116 -63362889 - MER4D LTR ERV1 -324 541 194 1825 151 27 7 chr20 3305116 3305414 -63362591 - AluJb SINE Alu -8 304 1 4624 137 52 43 chr20 3305414 3305610 -63362395 - MER4D LTR ERV1 -671 194 1 1758 120 84 4 chr20 3306991 3307265 -63360740 + AluSg SINE Alu 6 301 -9 2158 113 17 0 chr20 3307435 3307736 -63360269 + AluSx SINE Alu 1 306 -6 1474 148 14 0 chr20 3308068 3308284 -63359721 - MER20 DNA MER1_type 0 219 1 333 228 73 32 chr20 3309610 3309733 -63358272 - L2 LINE L2 -41 3272 3145 420 149 138 0 chr20 3310288 3310375 -63357630 - L1M4 LINE L1 -2472 3674 3576 2070 82 78 4 chr20 3310928 3311209 -63356796 - AluSx SINE Alu -10 302 1 2108 118 17 3 chr20 3311455 3311751 -63356254 - AluSx SINE Alu -12 300 1 1068 205 24 0 chr20 3311885 3312095 -63355910 + U3 snRNA snRNA 1 215 -2 857 126 0 30 chr20 3312193 3312328 -63355677 - FLAM_A SINE Alu -1 132 2 883 218 25 21 chr20 3312344 3312583 -63355422 + L1MC/D LINE L1 3722 3961 -2185 353 194 183 0 chr20 3312587 3312680 -63355325 + L1MA4 LINE L1 6188 6297 -3 4849 215 43 28 chr20 3312682 3313081 -63354924 + L1MC/D LINE L1 3948 4340 -1902 1539 151 4 54 chr20 3313081 3313360 -63354645 - AluJo SINE Alu -19 293 29 4849 215 43 28 chr20 3313360 3313664 -63354341 + L1MC/D LINE L1 4340 4638 -1604 712 202 16 0 chr20 3313664 3313793 -63354212 + FLAM_A SINE Alu 1 131 -2 4849 215 43 28 chr20 3313793 3314664 -63353341 + L1MC/D LINE L1 4638 5548 -694 2987 214 36 0 chr20 3314647 3315363 -63352642 + L1MB2 LINE L1 4468 5209 -937 * 4158 140 39 92 chr20 3315367 3315417 -63352588 + L1MB2 LINE L1 5282 5333 -838 1732 148 6 81 chr20 3315417 3315749 -63352256 + AluJo SINE Alu 1 307 -5 4158 140 39 92 chr20 3315749 3316615 -63351390 + L1MB2 LINE L1 5333 6150 -21 1403 138 0 9 chr20 3316616 3316826 -63351179 - AluSq SINE Alu -4 309 102 1795 151 7 21 chr20 3316827 3317106 -63350899 - AluJb SINE Alu -37 275 1 815 164 0 15 chr20 3317142 3317276 -63350729 + FLAM_C SINE Alu 2 133 0 692 275 55 55 chr20 3317277 3317410 -63350595 + L1MC4 LINE L1 7552 7684 -358 2290 115 0 0 chr20 3317410 3317714 -63350291 + AluSx SINE Alu 1 304 -8 692 275 55 55 chr20 3317714 3318028 -63349977 + L1MC4 LINE L1 7684 8002 -40 2175 109 20 0 chr20 3318028 3318321 -63349684 - AluSx SINE Alu -13 299 1 692 275 55 55 chr20 3318321 3318363 -63349642 + L1MC4 LINE L1 8001 8042 0 281 247 0 21 chr20 3318973 3319070 -63348935 - L1ME4a LINE L1 -49 6072 5978 2403 93 6 0 chr20 3319224 3319535 -63348470 - AluSp SINE Alu 0 313 1 1355 173 112 29 chr20 3319566 3319844 -63348161 + AluJo SINE Alu 1 301 -11 223 303 53 61 chr20 3320078 3320210 -63347795 - MIR3 SINE MIR -73 135 5 304 250 48 32 chr20 3320650 3320774 -63347231 - L1MC4a LINE L1 -1879 5929 5804 714 130 0 0 chr20 3320823 3320950 -63347055 - AluSg/x SINE Alu 0 311 185 1423 161 32 28 chr20 3320950 3321198 -63346807 + AluJb SINE Alu 64 312 0 575 290 20 20 chr20 3321231 3321431 -63346574 - L1MC4a LINE L1 -2035 5773 5574 366 312 92 44 chr20 3321576 3321712 -63346293 - L1MC4a LINE L1 -757 5389 5261 2204 113 3 3 chr20 3321712 3322012 -63345993 + AluSq SINE Alu 1 300 -13 366 312 92 44 chr20 3322012 3322125 -63345880 - L1MC4a LINE L1 -885 5261 5128 2757 29 0 13 chr20 3322612 3322927 -63345078 - AluY SINE Alu 0 311 1 2065 145 10 0 chr20 3322932 3323236 -63344769 - AluSx SINE Alu -5 307 1 254 269 133 23 chr20 3323243 3323499 -63344506 - L1MC4a LINE L1 -1481 4665 4382 2451 114 28 19 chr20 3323511 3323872 -63344133 + THE1B LTR MaLR 1 364 0 595 254 207 65 chr20 3324019 3324621 -63343384 - L2 LINE L2 0 3313 2622 1926 161 0 3 chr20 3324621 3324919 -63343086 + AluJb SINE Alu 1 297 -15 595 254 207 65 chr20 3324919 3324956 -63343049 - L2 LINE L2 -691 2622 2592 2484 90 0 0 chr20 3324963 3325274 -63342731 - AluY SINE Alu 0 311 1 260 309 157 20 chr20 3325409 3325613 -63342392 - L1MC4a LINE L1 -2293 3853 3622 354 234 43 11 chr20 3326005 3326099 -63341906 + MLT1K LTR MaLR 492 588 0 274 284 38 71 chr20 3326112 3326323 -63341682 + L1MC4 LINE L1 7838 8041 -1 2183 113 30 0 chr20 3326863 3327164 -63340841 - AluSg SINE Alu 0 310 1 445 241 65 121 chr20 3327238 3327470 -63340535 + MLT1J LTR MaLR 156 374 -137 1148 157 7 117 chr20 3327886 3328186 -63339819 + L1MD3 LINE L1 7719 7985 -10 2139 108 24 3 chr20 3328860 3329156 -63338849 - AluSx SINE Alu -10 302 1 961 181 101 21 chr20 3329617 3329855 -63338150 - HAL1 LINE L1 -787 1720 1464 1656 148 75 35 chr20 3329914 3330236 -63337769 - L1MA8 LINE L1 0 6291 5951 1575 161 0 23 chr20 3330236 3330496 -63337509 - AluJo SINE Alu -14 298 45 1656 148 75 35 chr20 3330496 3330544 -63337461 - L1MA8 LINE L1 -340 5951 5906 333 256 83 16 chr20 3330534 3330655 -63337350 - HAL1 LINE L1 -1106 1401 1273 * 300 261 89 9 chr20 3330655 3330835 -63337170 + L2 LINE L2 539 793 -2521 1618 225 133 43 chr20 3330840 3331462 -63336543 + L2 LINE L2 1154 1831 -1483 700 127 9 9 chr20 3331480 3331590 -63336415 - FLAM_A SINE Alu -14 128 19 376 205 0 13 chr20 3331613 3331691 -63336314 + L2 LINE L2 1865 1941 -1373 2273 100 0 20 chr20 3331691 3331992 -63336013 - AluSq SINE Alu -18 295 1 328 206 0 15 chr20 3332070 3332138 -63335867 - HAL1 LINE L1 -925 1582 1516 218 128 26 0 chr20 3332151 3332190 -63335815 + L2 LINE L2 2412 2451 -863 202 270 128 40 chr20 3332227 3332375 -63335630 + L2 LINE L2 3119 3279 -34 713 328 136 3 chr20 3332496 3332856 -63335149 - MLT1I LTR MaLR -1 408 1 29 70 0 0 chr20 3335294 3335351 -63332654 + GC_rich Low_complexity Low_complexity 1 57 0 203 61 30 0 chr20 3335351 3335384 -63332621 + (CGGGGG)n Simple_repeat Simple_repeat 5 38 0 185 130 43 0 chr20 3335624 3335670 -63332335 + (CCCCG)n Simple_repeat Simple_repeat 1 48 0 2295 78 7 0 chr20 3336642 3336937 -63331068 - AluSx SINE Alu -15 297 1 2162 114 13 3 chr20 3336937 3337244 -63330761 - AluSx SINE Alu -2 310 1 657 209 0 0 chr20 3337634 3337744 -63330261 + FLAM_A SINE Alu 7 116 -26 267 137 27 27 chr20 3337759 3337832 -63330173 + (TA)n Simple_repeat Simple_repeat 2 74 0 1093 168 0 0 chr20 3337840 3338013 -63329992 + AluJb SINE Alu 127 299 -13 4225 171 31 28 chr20 3338019 3338746 -63329259 - L1MB7 LINE L1 -82 6102 5363 2609 65 3 0 chr20 3338746 3339053 -63328952 - AluSp SINE Alu -5 308 1 4225 171 31 28 chr20 3339053 3339570 -63328435 - L1MB7 LINE L1 -821 5363 4849 2170 122 3 0 chr20 3340556 3340852 -63327153 - AluSq SINE Alu -16 297 1 1595 179 26 29 chr20 3340939 3341252 -63326753 + AluJo SINE Alu 1 312 0 1946 145 20 7 chr20 3341573 3341876 -63326129 - AluSx SINE Alu -5 307 1 330 143 18 0 chr20 3342154 3342210 -63325795 - MSTA LTR MaLR 0 428 372 553 31 0 0 chr20 3342244 3342308 -63325697 - MSTA LTR MaLR -40 388 325 * 2596 99 63 5 chr20 3342287 3342681 -63325324 - MSTA LTR MaLR -11 417 1 6323 159 7 22 chr20 3342686 3343743 -63324262 - MSTA-int LTR MaLR -6 1645 605 1358 157 0 0 chr20 3343743 3343941 -63324064 - AluSq SINE Alu -115 198 1 3592 162 0 0 chr20 3343942 3344537 -63323468 - MSTA-int LTR MaLR -1026 568 1 2608 115 66 5 chr20 3344547 3344939 -63323066 - MSTA LTR MaLR -12 416 1 391 132 146 62 chr20 3345166 3345310 -63322695 - MER53 DNA DNA -33 156 1 2214 117 0 0 chr20 3345378 3345669 -63322336 + AluSg SINE Alu 1 291 -19 2524 198 71 94 chr20 3345683 3345853 -63322152 - L1ME2 LINE L1 0 6164 5992 312 27 0 0 chr20 3345853 3345890 -63322115 + (CA)n Simple_repeat Simple_repeat 2 38 0 2524 198 71 94 chr20 3345890 3345948 -63322057 - L1ME2 LINE L1 -172 5992 5934 1986 157 0 10 chr20 3345948 3346253 -63321752 - AluJo SINE Alu -10 302 1 2524 198 71 94 chr20 3346253 3346673 -63321332 - L1ME2 LINE L1 -230 5934 5506 2312 105 3 3 chr20 3346673 3346978 -63321027 + AluSx SINE Alu 3 307 -5 2524 198 71 94 chr20 3346978 3347319 -63320686 - L1ME2 LINE L1 -658 5506 5201 2244 111 0 3 chr20 3347319 3347616 -63320389 - AluSq SINE Alu -6 307 12 2524 198 71 94 chr20 3347616 3347699 -63320306 - L1ME2 LINE L1 -963 5201 5118 349 224 41 10 chr20 3348006 3348019 -63319986 - MIR SINE MIR -71 191 180 2571 190 43 24 chr20 3348019 3348551 -63319454 + MLT1F LTR MaLR 1 542 0 349 224 41 10 chr20 3348551 3348635 -63319370 - MIR SINE MIR -82 180 91 768 168 0 28 chr20 3348704 3348840 -63319165 + FLAM_C SINE Alu 2 135 -177 2546 65 0 0 chr20 3348840 3349134 -63318871 - AluSq SINE Alu -19 294 1 39 31 0 16 chr20 3349140 3349177 -63318828 + AT_rich Low_complexity Low_complexity 1 38 -25 1652 166 0 18 chr20 3349177 3349454 -63318551 + AluJb SINE Alu 15 286 -26 39 31 0 16 chr20 3349454 3349480 -63318525 + AT_rich Low_complexity Low_complexity 38 63 0 186 291 55 0 chr20 3349662 3349717 -63318288 - MIR SINE MIR -195 67 10 3009 145 8 22 chr20 3350024 3350534 -63317471 + L1PB4 LINE L1 5654 6156 0 355 193 40 40 chr20 3350536 3350712 -63317293 + (TATAA)n Simple_repeat Simple_repeat 1 176 0 218 100 67 0 chr20 3350760 3350820 -63317185 + (TA)n Simple_repeat Simple_repeat 2 65 0 1286 230 65 25 chr20 3350880 3351202 -63316803 + LTR16C LTR ERVL 139 473 -18 2315 103 6 0 chr20 3351378 3351689 -63316316 + AluSp SINE Alu 1 313 0 2278 94 17 0 chr20 3351816 3352113 -63315892 + AluSx SINE Alu 1 302 -10 1497 85 60 0 chr20 3352179 3352378 -63315627 + AluSq SINE Alu 81 291 -22 692 249 16 104 chr20 3352379 3352545 -63315460 + L1MA9 LINE L1 5942 6060 -252 1775 174 7 0 chr20 3352545 3352832 -63315173 - AluJb SINE Alu -23 289 1 692 249 16 104 chr20 3352832 3353030 -63314975 + L1MA9 LINE L1 6060 6274 -38 466 228 110 55 chr20 3353037 3353150 -63314855 + L1ME LINE L1 5314 5419 -743 2300 84 10 7 chr20 3353150 3353446 -63314559 + AluSg SINE Alu 1 297 -13 466 228 110 55 chr20 3353446 3353586 -63314419 + L1ME LINE L1 5419 5581 -581 664 144 0 103 chr20 3353614 3353760 -63314245 + AluJ SINE Alu 2 132 -180 1624 174 50 4 chr20 3353809 3354090 -63313915 + AluJb SINE Alu 1 294 -18 21 0 0 0 chr20 3354347 3354368 -63313637 + AT_rich Low_complexity Low_complexity 1 21 0 32 0 0 0 chr20 3354466 3354498 -63313507 + AT_rich Low_complexity Low_complexity 1 32 0 1818 180 0 7 chr20 3354499 3354788 -63313217 - AluJo SINE Alu -25 287 1 1879 186 95 3 chr20 3355008 3355378 -63312627 - MER41D LTR ERV1 -9 548 145 517 137 147 0 chr20 3355378 3355473 -63312532 + AluJ SINE Alu 120 228 -84 2279 105 0 0 chr20 3355491 3355795 -63312210 - AluSc SINE Alu -5 304 1 291 100 0 0 chr20 3355807 3355847 -63312158 - MER41D LTR ERV1 -417 140 101 537 132 0 0 chr20 3355852 3355928 -63312077 - AluSq SINE Alu -153 160 85 1180 124 0 0 chr20 3355928 3356089 -63311916 - AluSx SINE Alu -133 179 19 499 133 0 0 chr20 3356090 3356165 -63311840 - MER41D LTR ERV1 -482 75 1 314 326 54 45 chr20 3356167 3356294 -63311711 + L1ME LINE L1 5347 5478 -643 1835 106 35 77 chr20 3356294 3356605 -63311400 + AluSx SINE Alu 1 298 -14 314 326 54 45 chr20 3356605 3356719 -63311286 + L1ME LINE L1 5478 5590 -531 656 274 5 53 chr20 3356962 3357170 -63310835 - MLT1J LTR MaLR -228 283 86 1023 118 0 0 chr20 3357215 3357350 -63310655 + AluSq/x SINE Alu 1 135 -178 2106 134 0 7 chr20 3357350 3357655 -63310350 + AluSx SINE Alu 1 303 -9 2919 82 31 11 chr20 3357747 3358206 -63309799 - MER1A DNA MER1_type 0 529 25 963 223 54 132 chr20 3358203 3358687 -63309318 + LTR16A1 LTR ERVL 12 457 0 * 244 286 104 49 chr20 3358795 3359081 -63308924 + MLT1I LTR MaLR 1 334 -215 2445 57 0 0 chr20 3359224 3359530 -63308475 + AluY SINE Alu 1 306 0 576 293 61 26 chr20 3360349 3360630 -63307375 + LTR16A LTR ERVL 1 360 -90 830 152 94 7 chr20 3360639 3360803 -63307202 - AluJb SINE Alu -25 287 141 242 284 84 0 chr20 3360914 3361009 -63306996 + HAL1 LINE L1 17 119 -2388 1768 189 0 10 chr20 3361042 3361338 -63306667 + AluJo SINE Alu 1 293 -19 271 225 0 28 chr20 3361338 3361409 -63306596 + L1MC3 LINE L1 5868 5936 -1872 1061 144 29 0 chr20 3362145 3362319 -63305686 - AluSg/x SINE Alu 0 312 134 1192 271 60 2 chr20 3362320 3362702 -63305303 - L1MC4 LINE L1 -533 7509 7101 1978 145 0 0 chr20 3362702 3363005 -63305000 - AluSx SINE Alu -9 303 1 1192 271 60 2 chr20 3363005 3363024 -63304981 - L1MC4 LINE L1 -941 7101 7085 896 139 0 14 chr20 3363038 3363182 -63304823 + FLAM_C SINE Alu 1 142 -1 818 210 0 0 chr20 3363219 3363362 -63304643 - FRAM SINE Alu -20 156 14 415 216 36 0 chr20 3363380 3363491 -63304514 - L1MC4 LINE L1 -968 7074 6960 833 150 0 8 chr20 3364183 3364310 -63303695 + FLAM_C SINE Alu 2 127 -16 432 261 54 0 chr20 3364328 3364439 -63303566 + HAL1 LINE L1 10 126 -2381 1819 145 0 39 chr20 3364494 3364804 -63303201 + AluJb SINE Alu 1 298 -14 251 231 0 0 chr20 3365179 3365231 -63302774 + LTR37B LTR ERV1 233 284 -184 423 0 0 0 chr20 3365289 3365336 -63302669 + (CA)n Simple_repeat Simple_repeat 2 48 0 2468 40 10 0 chr20 3365339 3365636 -63302369 - AluY SINE Alu -11 300 1 1285 135 60 71 chr20 3365636 3365685 -63302320 - MER41D LTR ERV1 -294 263 215 2157 122 0 0 chr20 3365685 3365989 -63302016 - AluSx SINE Alu -8 304 1 1285 135 60 71 chr20 3365989 3366205 -63301800 - MER41D LTR ERV1 -342 215 1 229 243 27 40 chr20 3366206 3366280 -63301725 + HAL1 LINE L1 1316 1388 -1119 1822 143 3 3 chr20 3366281 3366567 -63301438 + AluJo SINE Alu 1 286 -26 324 70 0 0 chr20 3366568 3366611 -63301394 + (CA)n Simple_repeat Simple_repeat 2 44 0 2902 185 141 121 chr20 3366611 3367192 -63300813 + L1MC3 LINE L1 6542 7110 -675 333 216 52 72 chr20 3367192 3367289 -63300716 + MLT1F1 LTR MaLR 39 133 -434 2902 185 141 121 chr20 3367289 3367792 -63300213 + L1MC3 LINE L1 7110 7745 -40 180 0 0 0 chr20 3367792 3367812 -63300193 + (T)n Simple_repeat Simple_repeat 1 20 0 640 253 0 39 chr20 3367905 3368059 -63299946 - L2 LINE L2 -1 3312 3165 229 363 25 0 chr20 3368029 3368109 -63299896 - L2 LINE L2 -646 2668 2587 * 6040 63 32 76 chr20 3368110 3369536 -63298469 - SVA Other Other -645 1384 342 521 122 0 0 chr20 3369551 3369625 -63298380 - AluJb SINE Alu -187 125 52 1844 142 7 10 chr20 3369634 3369930 -63298075 - AluJo SINE Alu -17 295 1 450 211 45 23 chr20 3369982 3370115 -63297890 + HAL1 LINE L1 1392 1527 -980 436 263 42 94 chr20 3370249 3370462 -63297543 + HAL1 LINE L1 2112 2313 -194 201 200 73 0 chr20 3370542 3370597 -63297408 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 2010 90 72 0 chr20 3370769 3371048 -63296957 + AluSq SINE Alu 1 299 -14 252 256 44 15 chr20 3371480 3371617 -63296388 + L1MEd LINE L1 796 936 -5269 264 159 71 40 chr20 3371784 3371910 -63296095 + (TTATA)n Simple_repeat Simple_repeat 4 133 0 1622 173 3 0 chr20 3372038 3372322 -63295683 + AluJo SINE Alu 12 296 -16 712 331 69 38 chr20 3372329 3372564 -63295441 + L1MEd LINE L1 1663 1889 -4507 2055 112 0 20 chr20 3372564 3372869 -63295136 + AluSc SINE Alu 1 299 -10 712 331 69 38 chr20 3372869 3373151 -63294854 + L1MEd LINE L1 1889 2200 -4196 868 122 0 43 chr20 3373151 3373290 -63294715 + FLAM_C SINE Alu 1 133 0 712 331 69 38 chr20 3373290 3373305 -63294700 + L1MEd LINE L1 2200 2213 -4183 404 285 16 48 chr20 3373317 3373341 -63294664 + L1MEd LINE L1 2467 2490 -3725 1733 156 21 14 chr20 3373341 3373629 -63294376 + AluSx SINE Alu 1 290 -22 404 285 16 48 chr20 3373629 3373790 -63294215 + L1MEd LINE L1 2490 2646 -3569 923 293 81 7 chr20 3374007 3374465 -63293540 + L1MEd LINE L1 3213 3704 -2511 261 258 105 72 chr20 3374490 3374544 -63293461 + L1M4 LINE L1 4704 4755 -1391 1508 175 0 53 chr20 3374544 3374847 -63293158 + AluJb SINE Alu 3 289 -23 261 258 105 72 chr20 3374847 3375001 -63293004 + L1M4 LINE L1 4755 4919 -1227 314 279 137 6 chr20 3375001 3375162 -63292843 - LTR33A LTR ERVL -50 473 292 228 303 90 48 chr20 3375233 3375421 -63292584 - LTR50 LTR ERVL -564 231 36 466 254 88 82 chr20 3375427 3375567 -63292438 + L1M4 LINE L1 4925 5063 -1083 2162 105 0 0 chr20 3375567 3375863 -63292142 - AluSx SINE Alu -16 296 1 466 254 88 82 chr20 3375863 3375943 -63292062 + L1M4 LINE L1 5063 5141 -1005 1922 89 31 21 chr20 3375943 3376234 -63291771 - AluSp SINE Alu -19 294 1 832 139 31 0 chr20 3376240 3376369 -63291636 - FLAM_C SINE Alu 0 133 1 466 254 88 82 chr20 3376369 3376482 -63291523 + L1M4 LINE L1 5145 5268 -878 2229 113 0 0 chr20 3376548 3376857 -63291148 - AluSx SINE Alu -3 309 1 291 161 0 18 chr20 3376890 3376946 -63291059 + AluSp/q SINE Alu 242 296 -7 258 232 0 0 chr20 3376947 3377003 -63291002 + HAL1 LINE L1 2312 2367 -140 242 246 35 0 chr20 3377039 3377096 -63290909 + CT-rich Low_complexity Low_complexity 2 60 0 1029 208 5 5 chr20 3377096 3377308 -63290697 - AluJb SINE Alu -17 295 84 257 280 0 0 chr20 3377308 3377383 -63290622 + HAL1 LINE L1 2432 2506 -1 1918 96 0 32 chr20 3377533 3377813 -63290192 + AluSx SINE Alu 26 296 -16 436 301 29 21 chr20 3377819 3378098 -63289907 + L1M4 LINE L1 4754 5034 -1112 2368 76 3 0 chr20 3378502 3378803 -63289202 - AluSc SINE Alu -7 302 1 1542 145 48 7 chr20 3378813 3379104 -63288901 - AluJo SINE Alu 0 304 3 290 311 47 14 chr20 3379105 3379253 -63288752 + MLT1K LTR MaLR 421 573 -15 1476 185 16 53 chr20 3379414 3379733 -63288272 + AluJb SINE Alu 1 307 -5 486 252 14 84 chr20 3379911 3380125 -63287880 - MLT1K LTR MaLR -66 522 324 625 311 100 65 chr20 3380140 3380629 -63287376 - MLT1K LTR MaLR -8 580 75 1288 244 79 16 chr20 3380854 3381284 -63286721 - LTR16A1 LTR ERVL 0 457 1 1780 174 20 103 chr20 3381356 3381406 -63286599 - L1MA9 LINE L1 -38 6274 6221 1589 99 41 0 chr20 3381406 3381627 -63286378 + MER30 DNA MER1_type 1 230 0 1780 174 20 103 chr20 3381627 3381928 -63286077 - L1MA9 LINE L1 -91 6221 5973 1603 181 4 4 chr20 3381928 3382209 -63285796 - AluJb SINE Alu -31 281 1 1780 174 20 103 chr20 3382209 3382349 -63285656 - L1MA9 LINE L1 -339 5973 5823 699 154 8 0 chr20 3382349 3382466 -63285539 - FLAM_C SINE Alu -2 141 24 1874 234 64 21 chr20 3382600 3383070 -63284935 + LTR16C LTR ERVL 1 490 -1 24 53 0 0 chr20 3383176 3383214 -63284791 + AT_rich Low_complexity Low_complexity 1 38 0 288 154 0 0 chr20 3383296 3383348 -63284657 + U5 snRNA snRNA 1 52 -64 1867 118 4 0 chr20 3383369 3383641 -63284364 + AluSx SINE Alu 1 273 -39 556 219 7 7 chr20 3383641 3383796 -63284209 + GA-rich Low_complexity Low_complexity 2 156 0 2246 91 3 0 chr20 3383924 3384221 -63283784 + AluSx SINE Alu 1 298 -14 667 266 81 9 chr20 3384834 3385056 -63282949 - MIR SINE MIR -6 256 19 246 322 11 33 chr20 3385157 3385247 -63282758 + MIR SINE MIR 33 120 -88 1256 177 109 26 chr20 3385844 3385945 -63282060 + AluJb SINE Alu 1 92 -210 228 67 0 0 chr20 3385945 3385975 -63282030 + (CAA)n Simple_repeat Simple_repeat 2 31 0 1256 177 109 26 chr20 3385975 3386138 -63281867 + AluJb SINE Alu 92 287 -15 188 183 0 33 chr20 3386139 3386199 -63281806 + (CATA)n Simple_repeat Simple_repeat 2 59 0 262 328 0 0 chr20 3386435 3386502 -63281503 + L2 LINE L2 3107 3173 -99 1966 121 0 0 chr20 3386722 3387053 -63280952 - AluSx SINE Alu 0 331 1 456 19 0 0 chr20 3387227 3387280 -63280725 + (TG)n Simple_repeat Simple_repeat 1 53 0 1914 123 0 46 chr20 3388014 3388130 -63279875 - AluSq SINE Alu -2 311 191 2371 60 3 0 chr20 3388130 3388430 -63279575 - AluY SINE Alu -10 301 1 1914 123 0 46 chr20 3388430 3388639 -63279366 - AluSq SINE Alu -122 191 1 1247 261 164 3 chr20 3388904 3389294 -63278711 + LTR16B LTR ERVL 1 453 -11 912 261 20 0 chr20 3389308 3389507 -63278498 - MER63A DNA MER1_type -7 203 1 488 228 35 48 chr20 3389507 3389652 -63278353 + L1ME LINE L1 5642 5784 -386 821 181 44 0 chr20 3389671 3389831 -63278174 - AluJo/FRAM SINE Alu -12 300 134 1501 176 7 29 chr20 3389831 3390137 -63277868 - AluJo SINE Alu -13 299 1 2064 119 3 0 chr20 3390145 3390440 -63277565 - AluSx SINE Alu -16 296 1 2051 152 3 0 chr20 3390440 3390763 -63277242 - L1M3 LINE L1 -374 5797 5474 683 173 8 31 chr20 3390764 3390891 -63277114 - FLAM_A SINE Alu -5 128 5 2153 109 0 10 chr20 3390923 3391227 -63276778 - AluSx SINE Alu -11 301 1 330 252 18 45 chr20 3391281 3391392 -63276613 + L2 LINE L2 3206 3313 0 1227 182 146 77 chr20 3391422 3391528 -63276477 + MLT1D LTR MaLR 1 98 -407 2094 101 7 13 chr20 3391528 3391834 -63276171 + AluSx SINE Alu 2 305 -7 1227 182 146 77 chr20 3391834 3392145 -63275860 + MLT1D LTR MaLR 98 447 -58 1030 179 0 0 chr20 3392367 3392535 -63275470 + FAM SINE Alu 4 171 -4 207 0 0 0 chr20 3392599 3392622 -63275383 + (T)n Simple_repeat Simple_repeat 1 23 0 381 360 56 13 chr20 3392622 3392855 -63275150 + L1M4 LINE L1 2151 2393 -3753 272 222 25 0 chr20 3393120 3393201 -63274804 + CT-rich Low_complexity Low_complexity 4 86 0 412 180 90 0 chr20 3393404 3393493 -63274512 + MLT1D LTR MaLR 407 503 -2 1027 224 57 24 chr20 3394400 3394646 -63273359 + LTR16A1 LTR ERVL 204 457 0 394 265 146 40 chr20 3395238 3395389 -63272616 - MLT1H1 LTR MaLR 0 595 429 * 957 202 80 106 chr20 3395356 3395591 -63272414 - MLT1H1 LTR MaLR -251 304 77 243 0 0 0 chr20 3395591 3395618 -63272387 + (TGGGGG)n Simple_repeat Simple_repeat 3 29 0 957 202 80 106 chr20 3395618 3395694 -63272311 - MLT1H1 LTR MaLR -478 77 1 1888 148 3 13 chr20 3395761 3396072 -63271933 - AluJo SINE Alu -3 309 2 369 243 73 68 chr20 3396831 3397172 -63270833 - MLT1G1 LTR MaLR 0 595 248 2036 86 46 0 chr20 3397225 3397505 -63270500 - AluSg SINE Alu -17 293 1 200 255 0 20 chr20 3397885 3397936 -63270069 - L2 LINE L2 -1 3271 3222 1808 129 11 3 chr20 3397939 3398225 -63269780 - AluJb SINE Alu -24 288 1 186 143 0 0 chr20 3398581 3398616 -63269389 + (CACG)n Simple_repeat Simple_repeat 3 37 0 202 235 0 49 chr20 3398766 3398847 -63269158 + (CGG)n Simple_repeat Simple_repeat 2 78 0 318 132 0 0 chr20 3398943 3398996 -63269009 + (CTG)n Simple_repeat Simple_repeat 3 55 0 201 143 0 0 chr20 3399003 3399038 -63268967 + (CGG)n Simple_repeat Simple_repeat 2 36 0 601 267 131 74 chr20 3400046 3400413 -63267592 - L2 LINE L2 0 3313 2926 410 275 258 11 chr20 3400752 3401201 -63266804 - L2 LINE L2 -13 3300 2755 220 301 187 28 chr20 3401491 3401780 -63266225 - L2 LINE L2 -719 2595 2261 2275 53 3 0 chr20 3402083 3402389 -63265616 + AluY SINE Alu 1 307 0 2167 92 3 3 chr20 3402408 3402711 -63265294 + AluSg SINE Alu 1 303 -7 234 205 181 24 chr20 3402969 3403052 -63264953 - MIR SINE MIR -15 247 152 1752 165 0 3 chr20 3403523 3403826 -63264179 + AluJb SINE Alu 5 306 -6 426 278 105 23 chr20 3403885 3404018 -63263987 - MIR SINE MIR -113 149 6 2245 94 0 3 chr20 3404235 3404534 -63263471 + AluSq SINE Alu 3 300 -13 224 233 0 0 chr20 3404651 3404694 -63263311 + L2 LINE L2 3180 3222 -91 224 233 0 0 chr20 3404728 3404771 -63263234 + L2 LINE L2 3180 3222 -91 221 219 0 0 chr20 3404805 3404846 -63263159 + L2 LINE L2 3180 3220 -93 240 209 0 0 chr20 3404882 3404925 -63263080 + L2 LINE L2 3180 3222 -91 240 209 0 0 chr20 3404959 3405002 -63263003 + L2 LINE L2 3180 3222 -91 224 233 0 0 chr20 3405036 3405079 -63262926 + L2 LINE L2 3180 3222 -91 240 209 0 0 chr20 3405113 3405156 -63262849 + L2 LINE L2 3180 3222 -91 224 233 0 0 chr20 3405190 3405233 -63262772 + L2 LINE L2 3180 3222 -91 307 181 25 188 chr20 3405267 3405427 -63262578 + L2 LINE L2 3180 3313 0 185 319 104 39 chr20 3405445 3405705 -63262300 + L2 LINE L2 2196 2472 -842 3266 72 54 39 chr20 3405870 3406353 -63261652 + L1PA7 LINE L1 5664 6153 -1 1381 175 130 0 chr20 3406578 3406847 -63261158 - AluJo SINE Alu -8 304 1 391 354 52 68 chr20 3406881 3407245 -63260760 - L2 LINE L2 -4 3268 2911 1800 212 67 25 chr20 3407245 3407693 -63260312 - MLT1C LTR MaLR 0 467 1 391 354 52 68 chr20 3407693 3407769 -63260236 - L2 LINE L2 -361 2911 2835 419 301 93 82 chr20 3407832 3408261 -63259744 + MLT1K LTR MaLR 155 588 0 242 128 0 0 chr20 3408292 3408331 -63259674 - MLT1A1 LTR MaLR -4 361 323 1459 181 14 31 chr20 3409012 3409300 -63258705 - AluJo SINE Alu -27 285 3 201 74 0 0 chr20 3409443 3409470 -63258535 + (T)n Simple_repeat Simple_repeat 1 27 0 25 112 0 0 chr20 3409715 3409831 -63258174 + AT_rich Low_complexity Low_complexity 1 116 0 308 224 58 71 chr20 3410863 3411009 -63256996 - L1ME LINE L1 -311 5842 5684 1614 187 3 3 chr20 3411009 3411303 -63256702 - AluJb SINE Alu -18 294 1 308 224 58 71 chr20 3411303 3411360 -63256645 - L1ME LINE L1 -469 5684 5628 245 239 65 84 chr20 3411360 3411623 -63256382 - Charlie2 DNA MER1_type -1 2861 2604 1885 182 3 3 chr20 3411623 3411930 -63256075 + AluJo SINE Alu 1 307 -5 560 329 32 16 chr20 3411953 3412202 -63255803 - L1ME LINE L1 -1008 5121 4869 313 292 47 76 chr20 3412284 3412520 -63255485 - L1ME LINE L1 -1517 4612 4384 351 0 0 0 chr20 3412566 3412605 -63255400 + (TTA)n Simple_repeat Simple_repeat 2 40 0 391 269 117 59 chr20 3412811 3413067 -63254938 - L1ME LINE L1 -1820 4309 4039 334 260 26 52 chr20 3413101 3413267 -63254738 - L1ME LINE L1 -2248 3881 3719 2416 97 0 0 chr20 3413267 3413576 -63254429 - AluSg SINE Alu -1 309 1 334 260 26 52 chr20 3413576 3413601 -63254404 - L1ME LINE L1 -2410 3719 3695 317 316 48 0 chr20 3413618 3413815 -63254190 - L1ME LINE L1 -875 1615 1426 314 171 53 135 chr20 3413835 3414005 -63254000 - L1MC5 LINE L1 -48 7913 7758 1597 164 92 0 chr20 3414052 3414333 -63253672 - AluSx SINE Alu 0 312 6 1080 286 101 57 chr20 3414432 3414904 -63253101 - L1MEd LINE L1 -4840 1289 839 1889 101 8 0 chr20 3414904 3415152 -63252853 - AluSg1 SINE Alu -24 285 36 1080 286 101 57 chr20 3415152 3415834 -63252171 - L1MEd LINE L1 -5290 839 91 1280 259 58 62 chr20 3415854 3416603 -63251402 - L1M4 LINE L1 -984 5162 4414 2190 91 0 0 chr20 3416603 3416906 -63251099 - AluSx SINE Alu 0 314 12 1280 259 58 62 chr20 3416906 3416943 -63251062 - L1M4 LINE L1 -1732 4414 4378 666 278 158 39 chr20 3418815 3419308 -63248697 + L2 LINE L2 1702 2253 -1061 219 304 108 10 chr20 3419347 3419449 -63248556 + L2 LINE L2 2437 2548 -766 324 0 0 0 chr20 3419825 3419861 -63248144 + (TG)n Simple_repeat Simple_repeat 2 37 0 282 95 0 0 chr20 3420469 3420511 -63247494 + (GA)n Simple_repeat Simple_repeat 2 43 0 213 39 0 0 chr20 3420528 3420554 -63247451 + (CA)n Simple_repeat Simple_repeat 1 26 0 286 125 57 40 chr20 3420560 3420736 -63247269 + (TA)n Simple_repeat Simple_repeat 2 180 0 23 0 0 0 chr20 3420736 3420759 -63247246 + AT_rich Low_complexity Low_complexity 1 23 0 246 32 0 0 chr20 3420775 3420806 -63247199 + (TG)n Simple_repeat Simple_repeat 2 32 0 1622 179 3 27 chr20 3420820 3421117 -63246888 - AluJo SINE Alu -22 290 1 880 116 8 0 chr20 3421118 3421239 -63246766 - AluJo SINE Alu -178 134 13 184 330 135 69 chr20 3421598 3421977 -63246028 - L2 LINE L2 -50 3222 2819 192 322 58 58 chr20 3422018 3422192 -63245813 - L2 LINE L2 -570 2744 2571 262 321 28 9 chr20 3422361 3422467 -63245538 - L2 LINE L2 -1026 2288 2181 23 0 0 0 chr20 3422716 3422739 -63245266 + AT_rich Low_complexity Low_complexity 1 23 0 284 286 150 41 chr20 3422960 3423107 -63244898 - MER5B DNA MER1_type -15 163 1 559 249 128 48 chr20 3423305 3423718 -63244287 + L1MC4a LINE L1 5749 6194 -1614 14504 23 0 5 chr20 3423741 3425570 -63242435 - L1PA3 LINE L1 -2928 3218 1399 18095 28 1 2 chr20 3425570 3428502 -63239503 + L1PA3 LINE L1 3217 6151 -4 35 0 0 0 chr20 3428502 3428537 -63239468 + AT_rich Low_complexity Low_complexity 1 35 0 630 310 35 22 chr20 3428847 3429163 -63238842 + L1MC4a LINE L1 6495 6814 -994 394 291 40 84 chr20 3429177 3429428 -63238577 + L1MEd LINE L1 348 587 -5829 3363 211 73 70 chr20 3429916 3432051 -63235954 + L1MDb LINE L1 7 2009 -4397 1976 123 3 31 chr20 3432051 3432396 -63235609 + AluSq SINE Alu 1 337 0 3363 211 73 70 chr20 3432396 3432670 -63235335 + L1MDb LINE L1 2009 2281 -4125 2746 193 32 2 chr20 3432670 3433199 -63234806 + MLT2B3 LTR ERVL 2 546 -8 851 207 132 3 chr20 3433200 3433552 -63234453 + L1MDb LINE L1 2273 2672 -3734 1352 191 21 82 chr20 3433565 3433956 -63234049 + L1MD2 LINE L1 5971 6358 -1 359 140 0 110 chr20 3433955 3433998 -63234007 + L1MD3 LINE L1 7698 7725 -270 * 2186 124 0 3 chr20 3433998 3434304 -63233701 + AluSx SINE Alu 1 305 -7 359 140 0 110 chr20 3434304 3434360 -63233645 + L1MD3 LINE L1 7725 7786 -209 186 43 0 0 chr20 3434360 3434383 -63233622 + (CA)n Simple_repeat Simple_repeat 2 24 0 327 289 75 64 chr20 3434385 3434665 -63233340 + L1MEd LINE L1 1084 1366 -5050 495 53 0 160 chr20 3434666 3434760 -63233245 + MADE1 DNA Mariner 2 80 0 2277 81 7 17 chr20 3434781 3435079 -63232926 + AluSg1 SINE Alu 1 295 -14 236 35 0 0 chr20 3435091 3435120 -63232885 - MADE1 DNA Mariner -43 37 9 263 292 44 15 chr20 3435156 3435293 -63232712 + L1MEd LINE L1 1252 1392 -5034 2136 62 52 72 chr20 3435351 3435657 -63232348 - AluSc SINE Alu -7 302 3 766 129 9 9 chr20 3435723 3435839 -63232166 + FLAM_C SINE Alu 1 116 -27 22 35 0 0 chr20 3435841 3435870 -63232135 + AT_rich Low_complexity Low_complexity 1 29 0 764 257 119 63 chr20 3435870 3435989 -63232016 + L1MEd LINE L1 1511 1622 -4804 923 199 92 10 chr20 3435989 3436195 -63231810 - MER58A DNA MER1_type 0 224 2 764 257 119 63 chr20 3436195 3437139 -63230866 + L1MEd LINE L1 1622 2781 -3645 2119 114 0 23 chr20 3437154 3437460 -63230545 - AluSx SINE Alu -13 299 1 1303 245 62 90 chr20 3437466 3437919 -63230086 - L1MC4 LINE L1 0 8042 7623 974 228 9 9 chr20 3437919 3438143 -63229862 - MER58A DNA MER1_type 0 224 1 1303 245 62 90 chr20 3438143 3438546 -63229459 - L1MC4 LINE L1 -419 7623 7210 700 224 122 25 chr20 3438650 3439011 -63228994 + L1MEd LINE L1 3151 3546 -2880 207 0 0 0 chr20 3439742 3439765 -63228240 + (TA)n Simple_repeat Simple_repeat 1 23 0 9502 32 14 0 chr20 3439765 3441692 -63226313 - L1PA4 LINE L1 -2 6153 4211 915 74 0 0 chr20 3441697 3441818 -63226187 - L1P LINE L1 -6025 121 1 1061 259 91 37 chr20 3441873 3442334 -63225671 + L1MEd LINE L1 3764 4277 -2149 1859 164 10 0 chr20 3442334 3442633 -63225372 + AluJb SINE Alu 1 302 -10 1061 259 91 37 chr20 3442633 3442874 -63225131 + L1MEd LINE L1 4277 4504 -1922 827 278 140 105 chr20 3442895 3444030 -63223975 - L2 LINE L2 -1039 2275 1101 493 245 66 0 chr20 3444045 3444196 -63223809 - MER104 DNA Tc2 -16 164 4 240 185 15 31 chr20 3444199 3444264 -63223741 - MLT1L LTR MaLR -6 609 546 3319 56 9 0 chr20 3444380 3444812 -63223193 - L1PA7 LINE L1 -236 5918 5483 335 277 130 12 chr20 3444858 3445111 -63222894 + L1ME4a LINE L1 5813 6095 -26 1913 122 0 0 chr20 3445182 3445444 -63222561 + AluSx SINE Alu 38 299 -13 705 137 144 7 chr20 3446031 3446170 -63221835 + L1MB7 LINE L1 5864 6021 -163 525 158 50 8 chr20 3446174 3446294 -63221711 + L1MB7 LINE L1 6060 6184 0 406 222 202 30 chr20 3446325 3446528 -63221477 - L1MC5 LINE L1 -118 7843 7606 333 284 37 8 chr20 3446532 3446666 -63221339 - L1ME LINE L1 -302 5819 5682 384 325 80 15 chr20 3447060 3447260 -63220745 + HAL1 LINE L1 1055 1267 -1240 736 155 8 23 chr20 3447260 3447414 -63220591 + L1PB2 LINE L1 6013 6164 0 250 275 50 17 chr20 3447480 3447600 -63220405 + HAL1 LINE L1 1516 1639 -868 2005 148 0 7 chr20 3448149 3448453 -63219552 - AluSx SINE Alu -10 302 1 229 114 91 0 chr20 3448596 3448640 -63219365 + L1MEc LINE L1 2424 2471 -3925 924 142 24 0 chr20 3448641 3448810 -63219195 + L1PA16 LINE L1 5876 6048 -118 225 121 52 52 chr20 3448812 3448870 -63219135 + L1MEc LINE L1 2954 3011 -3204 517 180 90 0 chr20 3448884 3449006 -63218999 + L1PA16 LINE L1 6034 6166 0 2056 251 34 13 chr20 3449013 3449453 -63218552 + L1M4 LINE L1 2346 2808 -3338 1545 160 21 46 chr20 3449453 3449734 -63218271 - AluJo SINE Alu -26 286 13 2056 251 34 13 chr20 3449734 3450001 -63218004 + L1M4 LINE L1 2808 3068 -3078 29644 89 13 16 chr20 3450001 3455738 -63212267 + L1PA7 LINE L1 736 6469 0 1808 242 115 38 chr20 3455705 3455745 -63212260 + L1ME2 LINE L1 5595 5631 -1018 * 2256 93 3 0 chr20 3455745 3456035 -63211970 + AluSg1 SINE Alu 1 291 -18 2090 132 84 3 chr20 3456035 3456390 -63211615 + L1PA15 LINE L1 5777 6160 -5 1808 242 115 38 chr20 3456390 3456468 -63211537 + L1ME2 LINE L1 5631 5702 -947 1846 179 3 7 chr20 3456468 3456770 -63211235 - AluJb SINE Alu -11 301 1 1808 242 115 38 chr20 3456770 3457475 -63210530 + L1ME2 LINE L1 5702 6645 -4 480 298 121 27 chr20 3457502 3457834 -63210171 + L1M4 LINE L1 2131 2493 -3653 198 80 60 0 chr20 3457874 3457924 -63210081 + (TA)n Simple_repeat Simple_repeat 1 53 0 1963 119 0 58 chr20 3457925 3458236 -63209769 - AluSg SINE Alu -17 293 1 588 288 49 18 chr20 3458883 3459304 -63208701 + L1MC4a LINE L1 5472 5904 -1904 234 0 0 0 chr20 3459454 3459480 -63208525 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1188 164 4 44 chr20 3459580 3459806 -63208199 + AluJo SINE Alu 85 301 -11 508 250 190 33 chr20 3460294 3460426 -63207579 - LTR16A LTR ERVL -103 347 237 2543 51 0 0 chr20 3460426 3460718 -63207287 - AluY SINE Alu -19 292 1 508 250 190 33 chr20 3460718 3460885 -63207120 - LTR16A LTR ERVL -213 237 1 1232 283 50 6 chr20 3461001 3461362 -63206643 + MLT1J LTR MaLR 43 419 -92 224 163 0 20 chr20 3461432 3461481 -63206524 + (TA)n Simple_repeat Simple_repeat 1 48 0 568 185 8 46 chr20 3461481 3461611 -63206394 - FLAM_C SINE Alu -16 127 3 245 164 36 0 chr20 3461637 3461692 -63206313 - MLT1L LTR MaLR -414 201 145 795 301 158 12 chr20 3461738 3462300 -63205705 - L2 LINE L2 -2203 1111 468 913 207 143 45 chr20 3462345 3462611 -63205394 + AluJo SINE Alu 2 293 -19 48 60 0 0 chr20 3462790 3462873 -63205132 + AT_rich Low_complexity Low_complexity 1 83 0 351 0 0 0 chr20 3463245 3463284 -63204721 + (CA)n Simple_repeat Simple_repeat 2 40 0 2220 101 7 0 chr20 3463290 3463586 -63204419 - AluSq SINE Alu -15 298 1 4534 168 54 89 chr20 3463783 3463852 -63204153 - Charlie1 DNA MER1_type 0 2761 2691 2137 98 0 7 chr20 3463852 3464167 -63203838 - AluSx SINE Alu 0 313 1 4534 168 54 89 chr20 3464167 3465169 -63202836 - Charlie1 DNA MER1_type -70 2691 1656 3150 47 0 0 chr20 3465169 3465553 -63202452 - L1PA5 LINE L1 -1 6153 5770 4534 168 54 89 chr20 3465553 3465611 -63202394 - Charlie1 DNA MER1_type -1105 1656 1598 1391 6 0 12 chr20 3465611 3465774 -63202231 - L1PA2 LINE L1 0 6155 5995 4534 168 54 89 chr20 3465774 3466147 -63201858 - Charlie1 DNA MER1_type -1163 1598 1 411 288 61 58 chr20 3466183 3466478 -63201527 + L2 LINE L2 2369 2664 -650 341 308 221 13 chr20 3466454 3466762 -63201243 + L2 LINE L2 2809 3180 -133 * 242 292 79 63 chr20 3466823 3467138 -63200867 - L2 LINE L2 -1389 1925 1606 245 342 108 9 chr20 3467644 3467755 -63200250 + L2 LINE L2 3151 3272 0 207 257 36 67 chr20 3468136 3468282 -63199723 + MIR SINE MIR 47 186 -66 192 77 0 0 chr20 3468425 3468451 -63199554 + (TG)n Simple_repeat Simple_repeat 1 26 0 2775 7 0 0 chr20 3468733 3469033 -63198972 - AluY SINE Alu -11 300 1 2018 171 12 0 chr20 3469050 3469394 -63198611 - MER7A DNA MER2_type 0 346 1 180 275 0 0 chr20 3469930 3469970 -63198035 - MIR SINE MIR -5 257 218 402 176 0 37 chr20 3470197 3470305 -63197700 + C-rich Low_complexity Low_complexity 4 107 0 1716 136 0 43 chr20 3470315 3470595 -63197410 - AluJo SINE Alu -44 268 1 861 250 98 47 chr20 3470713 3471009 -63196996 + L2 LINE L2 3003 3313 0 2222 109 0 10 chr20 3471096 3471398 -63196607 + AluSx SINE Alu 1 299 -13 1752 159 0 66 chr20 3471407 3471740 -63196265 + AluJb SINE Alu 1 311 -1 275 300 79 14 chr20 3471953 3472093 -63195912 - L1ME LINE L1 -418 5752 5604 243 0 0 0 chr20 3472153 3472180 -63195825 + (TGG)n Simple_repeat Simple_repeat 3 29 0 404 336 59 42 chr20 3472195 3472481 -63195524 + L1ME LINE L1 5339 5629 -492 26 0 0 0 chr20 3472716 3472742 -63195263 + AT_rich Low_complexity Low_complexity 1 26 0 2171 109 17 7 chr20 3472745 3473047 -63194958 + AluSq SINE Alu 5 309 -4 392 297 146 21 chr20 3473611 3473803 -63194202 - MIR SINE MIR 0 262 47 2313 100 0 3 chr20 3474046 3474347 -63193658 - AluSg SINE Alu -10 300 1 1153 199 101 38 chr20 3475887 3475975 -63192030 - MER2 DNA MER2_type -8 337 256 2287 99 3 3 chr20 3475975 3476277 -63191728 + AluSx SINE Alu 1 302 -10 1153 199 101 38 chr20 3476277 3476505 -63191500 - MER2 DNA MER2_type -89 256 1 243 253 46 0 chr20 3477036 3477123 -63190882 - L1ME4a LINE L1 -43 6078 5988 21 36 0 0 chr20 3477274 3477302 -63190703 + AT_rich Low_complexity Low_complexity 1 28 0 1581 147 0 0 chr20 3477702 3477927 -63190078 + AluSq SINE Alu 1 225 -88 828 173 0 32 chr20 3477927 3478112 -63189893 - L1P LINE L1 -1290 4856 4678 455 266 18 0 chr20 3478544 3478657 -63189348 + L2 LINE L2 769 883 -2431 1191 218 62 87 chr20 3478658 3478865 -63189140 + LTR16A1 LTR ERVL 1 212 -245 449 206 124 0 chr20 3478865 3478962 -63189043 - MER81 DNA DNA -4 110 2 1191 218 62 87 chr20 3478962 3479223 -63188782 + LTR16A1 LTR ERVL 212 457 0 212 286 91 13 chr20 3479226 3479303 -63188702 + L2 LINE L2 880 962 -2352 552 306 43 14 chr20 3479310 3479519 -63188486 + L2 LINE L2 1290 1504 -1810 517 220 61 0 chr20 3479523 3479655 -63188350 + MER3 DNA MER1_type 1 140 -69 1958 238 97 21 chr20 3479657 3480189 -63187816 + L2 LINE L2 1931 2516 -798 1801 224 125 68 chr20 3480189 3480747 -63187258 - MLT1E LTR MaLR -2 591 2 1958 238 97 21 chr20 3480747 3480820 -63187185 + L2 LINE L2 2516 2582 -732 475 350 132 20 chr20 3481058 3481697 -63186308 + L2 LINE L2 2583 3310 -3 2298 71 4 0 chr20 3481962 3482290 -63185715 - AluY SINE Alu 0 329 1 2648 19 6 10 chr20 3482647 3482959 -63185046 - AluY SINE Alu 0 311 1 1612 214 90 38 chr20 3484937 3485516 -63182489 + HAL1b LINE L1 351 959 -389 335 241 91 70 chr20 3485899 3486098 -63181907 - L1ME4a LINE L1 -276 5886 5684 413 193 67 47 chr20 3486254 3486404 -63181601 + HAL1b LINE L1 1196 1348 0 359 172 32 11 chr20 3487694 3487787 -63180218 - L1MB3 LINE L1 -2 6181 6087 2496 111 31 7 chr20 3487795 3488220 -63179785 - L1MA4 LINE L1 -282 6018 5584 2223 78 0 7 chr20 3488697 3489007 -63178998 + AluSx SINE Alu 3 310 0 24 0 0 0 chr20 3489127 3489151 -63178854 + AT_rich Low_complexity Low_complexity 1 24 0 1733 158 14 7 chr20 3489391 3489682 -63178323 - AluJo SINE Alu -19 293 1 1178 202 20 4 chr20 3491513 3491761 -63176244 - L1MB3 LINE L1 0 6183 5932 355 322 40 7 chr20 3491973 3492122 -63175883 - L2 LINE L2 -220 3052 2899 2273 88 0 0 chr20 3492440 3492723 -63175282 + AluY SINE Alu 1 283 -28 1940 103 9 94 chr20 3493142 3493483 -63174522 + AluSx SINE Alu 1 312 0 2161 110 7 10 chr20 3494278 3494587 -63173418 + AluSx SINE Alu 1 308 -4 238 239 90 45 chr20 3494921 3494988 -63173017 + L2 LINE L2 3185 3254 -18 2360 75 7 7 chr20 3495665 3495970 -63172035 + AluY SINE Alu 1 305 -6 1111 126 0 6 chr20 3496018 3496177 -63171828 + FRAM SINE Alu 1 154 -22 3060 196 7 13 chr20 3496215 3496818 -63171187 + MER82 DNA MER2_type 33 631 -22 2506 125 101 9 chr20 3496835 3497290 -63170715 - Tigger3(Golem) DNA MER2_type -2 3027 2531 255 240 0 0 chr20 3497294 3497344 -63170661 - Tigger3(Golem) DNA MER2_type -2969 60 11 2034 158 0 0 chr20 3497445 3497742 -63170263 + AluJo SINE Alu 1 297 -15 815 237 118 17 chr20 3497746 3498101 -63169904 - L1MC5 LINE L1 -311 7650 7260 * 884 210 29 147 chr20 3498087 3498564 -63169441 - L1MC5 LINE L1 -914 7047 6627 1784 211 41 41 chr20 3498671 3498863 -63169142 - L1MC5 LINE L1 -1907 5901 5710 860 48 112 0 chr20 3498863 3498988 -63169017 - MER85 DNA T2_type 0 139 1 1784 211 41 41 chr20 3498988 3499358 -63168647 - L1MC5 LINE L1 -2097 5711 5339 379 367 77 17 chr20 3499380 3499729 -63168276 - L1MC5 LINE L1 -890 5256 4887 26 0 0 0 chr20 3499867 3499893 -63168112 + AT_rich Low_complexity Low_complexity 1 26 0 962 128 0 0 chr20 3500192 3500325 -63167680 + FLAM_A SINE Alu 1 133 0 675 173 8 23 chr20 3500899 3501032 -63166973 + MER3 DNA MER1_type 1 131 -78 185 0 0 39 chr20 3501032 3501058 -63166947 + (TTTAA)n Simple_repeat Simple_repeat 1 25 0 1639 131 123 0 chr20 3501392 3501694 -63166311 - AluSx SINE Alu 0 333 1 1864 144 10 20 chr20 3501886 3502184 -63165821 + AluJb SINE Alu 1 295 -17 2233 102 0 20 chr20 3502613 3502918 -63165087 - AluSg SINE Alu -11 299 1 260 270 0 24 chr20 3504135 3504230 -63163775 - MIR3 SINE MIR -3 205 113 585 76 0 0 chr20 3504326 3504405 -63163600 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 2366 112 0 0 chr20 3506860 3507172 -63160833 + AluSx SINE Alu 1 312 0 1846 140 3 37 chr20 3508616 3508916 -63159089 + AluJo SINE Alu 1 290 -22 1062 150 155 19 chr20 3509145 3509352 -63158653 - MER46A DNA MER2_type -1 235 1 819 154 0 37 chr20 3509614 3509750 -63158255 + FLAM_C SINE Alu 1 131 -2 210 235 0 0 chr20 3510349 3510400 -63157605 + A-rich Low_complexity Low_complexity 4 54 0 233 226 19 0 chr20 3511125 3511178 -63156827 + MER112 DNA MER1_type 195 248 -12 2385 100 0 3 chr20 3511183 3511493 -63156512 + AluSc SINE Alu 1 309 0 324 353 0 0 chr20 3511990 3512106 -63155899 + MIR3 SINE MIR 84 199 -9 324 272 50 56 chr20 3512930 3513110 -63154895 + L1ME4a LINE L1 5181 5359 -787 3238 162 109 50 chr20 3513307 3514102 -63153903 + L1MB7 LINE L1 5195 6033 -151 612 188 187 26 chr20 3514130 3514319 -63153686 + L1MB8 LINE L1 5845 6050 -120 572 171 130 41 chr20 3514319 3514465 -63153540 + L1MB8 LINE L1 5845 6003 -175 3772 199 40 20 chr20 3514478 3515479 -63152526 - L1M4 LINE L1 -609 5575 4549 1843 134 3 11 chr20 3515479 3515804 -63152201 - AluJb SINE Alu 0 323 1 3772 199 40 20 chr20 3515804 3515909 -63152096 - L1M4 LINE L1 -1635 4549 4448 2464 221 54 40 chr20 3515901 3516628 -63151377 - L1M4 LINE L1 -2049 4097 3358 * 2215 86 3 58 chr20 3516628 3516954 -63151051 - AluSc SINE Alu -1 308 1 2464 221 54 40 chr20 3516954 3516972 -63151033 - L1M4 LINE L1 -2788 3358 3342 2273 99 0 3 chr20 3517613 3517907 -63150098 - AluSq SINE Alu -20 293 1 261 196 0 0 chr20 3518088 3518139 -63149866 - MER91B DNA MER1_type -138 52 2 319 281 141 22 chr20 3518211 3518396 -63149609 + L1ME4a LINE L1 5670 5876 -245 318 239 96 0 chr20 3518444 3518569 -63149436 + L1ME4a LINE L1 1200 6040 -7 2342 214 98 26 chr20 3519092 3519733 -63148272 - MER76 LTR ERV -1 687 1 2437 97 0 0 chr20 3519774 3520084 -63147921 + AluSx SINE Alu 1 310 -2 215 203 270 0 chr20 3520711 3520785 -63147220 - MIR SINE MIR -90 118 25 664 280 129 4 chr20 3521015 3521240 -63146765 - MIR SINE MIR -1 261 9 186 286 14 29 chr20 3521265 3521335 -63146670 - MIR SINE MIR -193 69 1 251 197 106 15 chr20 3521772 3521838 -63146167 + L2 LINE L2 3241 3312 -1 1104 218 68 12 chr20 3524727 3525143 -63142862 + L1ME LINE L1 5028 5462 -704 977 190 23 36 chr20 3525150 3525371 -63142634 - Charlie1 DNA MER1_type -284 2477 2260 284 331 11 56 chr20 3525744 3525922 -63142083 + Charlie7 DNA MER1_type 24 193 -2419 2130 278 145 35 chr20 3526116 3527191 -63140814 + Charlie7 DNA MER1_type 483 1676 -936 1322 198 8 4 chr20 3527191 3527428 -63140577 - MER8 DNA MER2_type -1 238 1 1065 223 193 18 chr20 3527428 3527856 -63140149 + Charlie7 DNA MER1_type 1675 2178 -434 711 235 87 32 chr20 3527888 3528233 -63139772 + Charlie7 DNA MER1_type 2221 2584 -28 739 234 46 46 chr20 3528733 3528930 -63139075 + MIR SINE MIR 3 199 -63 1730 185 0 16 chr20 3529237 3529550 -63138455 + AluJo SINE Alu 1 308 -4 493 275 32 50 chr20 3529590 3529703 -63138302 + MIR SINE MIR 49 158 -104 2279 109 0 3 chr20 3529703 3530006 -63137999 + AluSx SINE Alu 1 302 -10 493 275 32 50 chr20 3530006 3530110 -63137895 + MIR SINE MIR 158 262 0 2410 93 10 0 chr20 3530340 3530650 -63137355 + AluSq SINE Alu 1 313 0 2499 75 7 0 chr20 3531136 3531444 -63136561 - AluSp SINE Alu -3 310 1 639 282 110 18 chr20 3531457 3531684 -63136321 + MIR SINE MIR 15 262 0 6169 67 16 2 chr20 3532795 3533582 -63134423 + L1PA11 LINE L1 5375 6172 -2 766 271 74 23 chr20 3534325 3534756 -63133249 - L1M4 LINE L1 -2324 3822 3370 6648 137 39 17 chr20 3534761 3536341 -63131664 - L1MA4 LINE L1 0 6300 4667 2207 135 0 0 chr20 3536341 3536653 -63131352 + AluSq SINE Alu 1 312 -1 6648 137 39 17 chr20 3536653 3537197 -63130808 - L1MA4 LINE L1 -1633 4667 4136 2694 149 43 17 chr20 3537267 3537360 -63130645 + L1MB4 LINE L1 5685 5774 -406 369 62 0 0 chr20 3537360 3537408 -63130597 + (TG)n Simple_repeat Simple_repeat 2 49 0 2694 149 43 17 chr20 3537408 3537797 -63130208 + L1MB4 LINE L1 5774 6180 0 1009 193 16 44 chr20 3537822 3538071 -63129934 + L1MD2 LINE L1 4616 4857 -1289 780 192 8 0 chr20 3538080 3538210 -63129795 - FLAM_A SINE Alu -6 136 6 1914 137 0 70 chr20 3538224 3538552 -63129453 - AluJb SINE Alu -7 305 1 3547 182 18 39 chr20 3538554 3539116 -63128889 + L1MD2 LINE L1 4849 5376 -983 2083 125 10 10 chr20 3539116 3539413 -63128592 + AluSx SINE Alu 1 297 -15 3547 182 18 39 chr20 3539413 3539981 -63128024 + L1MD2 LINE L1 5376 5954 -405 497 137 21 42 chr20 3540009 3540104 -63127901 - MLT1E1 LTR MaLR -341 313 221 394 216 45 0 chr20 3540092 3540180 -63127825 - MLT1E1 LTR MaLR -558 96 5 * 21 0 0 0 chr20 3540362 3540383 -63127622 + AT_rich Low_complexity Low_complexity 1 21 0 2235 161 92 14 chr20 3542282 3542717 -63125288 - L1MB7 LINE L1 -8 6176 5708 1765 145 4 7 chr20 3542825 3543101 -63124904 + AluSx SINE Alu 23 297 -15 1510 122 5 5 chr20 3543200 3543421 -63124584 - AluSg/x SINE Alu 0 310 90 2501 52 7 0 chr20 3543421 3543711 -63124294 + L1PA4 LINE L1 5864 6155 0 541 205 49 44 chr20 3544989 3545194 -63122811 + L1MC5 LINE L1 7723 7928 -33 894 148 0 22 chr20 3545194 3545329 -63122676 + FLAM_C SINE Alu 2 133 0 411 263 73 69 chr20 3545887 3546161 -63121844 + HAL1 LINE L1 2225 2499 -8 191 88 29 0 chr20 3547159 3547193 -63120812 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 202 261 0 0 chr20 3547713 3547759 -63120246 + C-rich Low_complexity Low_complexity 3 48 0 414 0 0 0 chr20 3547876 3547922 -63120083 + (TTTTG)n Simple_repeat Simple_repeat 1 46 0 1904 128 11 7 chr20 3547926 3548200 -63119805 - AluSx SINE Alu -37 275 1 1588 63 72 36 chr20 3548534 3548755 -63119250 - MER30 DNA MER1_type 0 230 2 284 246 14 0 chr20 3549022 3549091 -63118914 - MER46C DNA MER2_type 0 338 269 374 243 37 47 chr20 3549580 3549687 -63118318 - L2 LINE L2 0 3313 3208 535 251 38 66 chr20 3551410 3551593 -63116412 + MER104 DNA MER2_type 2 179 -1 1761 237 97 97 chr20 3552697 3553606 -63114399 - HAL1 LINE L1 0 2507 1596 2097 139 0 0 chr20 3553606 3553908 -63114097 + AluJb SINE Alu 1 302 -10 1761 237 97 97 chr20 3553908 3554053 -63113952 - HAL1 LINE L1 -910 1597 1453 321 225 0 25 chr20 3554067 3554147 -63113858 - L1ME3A LINE L1 -12 6158 6081 376 258 33 53 chr20 3554281 3554432 -63113573 - L1ME3A LINE L1 -104 6066 5919 2301 100 0 13 chr20 3554434 3554743 -63113262 - AluSx SINE Alu -7 305 1 1020 241 109 68 chr20 3554758 3554861 -63113144 + L1M4 LINE L1 2902 2999 -3147 889 171 114 0 chr20 3554861 3555019 -63112986 + MER5B DNA MER1_type 3 178 0 1020 241 109 68 chr20 3555019 3555530 -63112475 + L1M4 LINE L1 2999 3541 -2605 2470 65 0 0 chr20 3555547 3555840 -63112165 + AluY SINE Alu 1 293 -18 417 247 72 46 chr20 3555849 3556043 -63111962 + L1M4 LINE L1 3891 4089 -2057 1408 171 57 0 chr20 3556043 3556271 -63111734 + Tigger7 DNA MER2_type 25 265 -468 524 185 11 0 chr20 3556272 3556364 -63111641 + Tigger7 DNA MER2_type 2394 2486 -5 295 267 67 30 chr20 3556984 3557119 -63110886 + L2 LINE L2 2849 2988 -284 2384 221 58 45 chr20 3557139 3557848 -63110157 - MER21B LTR ERV1 -83 780 63 326 305 109 6 chr20 3557889 3558063 -63109942 + L2 LINE L2 3109 3300 -13 1876 146 16 25 chr20 3558591 3558906 -63109099 - AluJo SINE Alu 0 312 1 795 284 75 19 chr20 3559557 3559877 -63108128 + L2 LINE L2 2070 2407 -907 912 273 163 28 chr20 3559877 3560492 -63107513 + L2 LINE L2 2581 3275 -38 1812 110 46 19 chr20 3560536 3560799 -63107206 + AluSx SINE Alu 21 290 -22 2740 94 46 23 chr20 3562626 3563052 -63104953 + L1PB1 LINE L1 5742 6176 0 22 0 0 0 chr20 3563464 3563486 -63104519 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr20 3563568 3563610 -63104395 + AT_rich Low_complexity Low_complexity 1 42 0 630 298 69 17 chr20 3564232 3564480 -63103525 - MIR SINE MIR 0 262 3 485 309 71 7 chr20 3565330 3565529 -63102476 - MIR SINE MIR -44 218 12 350 289 171 30 chr20 3565723 3565772 -63102233 - L1MC5 LINE L1 -187 7774 7733 3729 84 4 6 chr20 3565772 3566269 -63101736 - L1PA8 LINE L1 0 6172 5677 350 289 171 30 chr20 3566269 3566482 -63101523 - L1MC5 LINE L1 -228 7733 7475 2006 122 7 0 chr20 3566903 3567209 -63100796 - AluSx SINE Alu 0 308 1 944 275 95 49 chr20 3567519 3568292 -63099713 + L1MEd LINE L1 563 1300 -5010 3599 170 28 6 chr20 3568292 3568944 -63099061 + L1MB3 LINE L1 5511 6176 -7 944 275 95 49 chr20 3568944 3568965 -63099040 + L1MEd LINE L1 1300 1319 -4991 2268 114 0 0 chr20 3568965 3569272 -63098733 + AluSx SINE Alu 1 307 -5 944 275 95 49 chr20 3569272 3569525 -63098480 + L1MEd LINE L1 1319 1661 -4649 1603 282 134 17 chr20 3569671 3570335 -63097670 + L2 LINE L2 1957 2698 -616 487 188 157 13 chr20 3570384 3570615 -63097390 + MLT1E2 LTR MaLR 1 296 -330 895 187 0 0 chr20 3570620 3570775 -63097230 - FRAM SINE Alu -15 161 7 610 159 4 230 chr20 3570780 3571032 -63096973 + MLT1E2 LTR MaLR 410 604 -22 919 116 0 43 chr20 3571041 3571179 -63096826 + FLAM_C SINE Alu 2 133 0 309 313 134 22 chr20 3572549 3572683 -63095322 - L1ME4a LINE L1 -199 5922 5774 499 217 130 7 chr20 3573694 3573832 -63094173 - MIR SINE MIR -16 246 92 483 228 168 60 chr20 3574074 3574306 -63093699 + L1MC4a LINE L1 5914 6170 -1638 22 35 0 0 chr20 3574307 3574336 -63093669 + AT_rich Low_complexity Low_complexity 1 29 0 255 175 0 0 chr20 3575198 3575255 -63092750 + CT-rich Low_complexity Low_complexity 3 59 0 195 100 0 0 chr20 3575256 3575286 -63092719 + (CA)n Simple_repeat Simple_repeat 1 30 0 465 229 106 37 chr20 3579646 3580003 -63088002 + MLT1J2 LTR MaLR 1 450 0 180 0 0 0 chr20 3580223 3580243 -63087762 + (CAA)n Simple_repeat Simple_repeat 2 21 0 243 0 0 0 chr20 3580684 3580711 -63087294 + (A)n Simple_repeat Simple_repeat 1 27 0 307 210 0 17 chr20 3581320 3581402 -63086603 + MLT1J LTR MaLR 247 381 -125 796 263 183 9 chr20 3581487 3581825 -63086180 - L2 LINE L2 -6 3307 2911 697 303 34 4 chr20 3581829 3582067 -63085938 + MER20B DNA MER1_type 202 446 -337 1019 213 88 86 chr20 3583070 3583443 -63084562 - MLT1D LTR MaLR -2 503 127 1885 133 44 0 chr20 3583443 3583736 -63084269 + AluJo SINE Alu 1 306 -6 1019 213 88 86 chr20 3583736 3583841 -63084164 - MLT1D LTR MaLR -378 127 24 1648 168 30 13 chr20 3583965 3584269 -63083736 - AluJo SINE Alu -3 309 1 1489 74 0 5 chr20 3584273 3584491 -63083514 - AluSc SINE Alu 0 308 92 581 278 12 0 chr20 3584491 3584660 -63083345 + MER20B DNA MER1_type 276 446 -337 508 106 0 0 chr20 3584773 3584839 -63083166 - Alu SINE Alu -244 66 1 357 313 134 5 chr20 3585238 3585455 -63082550 + MLT1K LTR MaLR 234 478 -110 2169 111 0 0 chr20 3585517 3585806 -63082199 + AluSx SINE Alu 1 289 -23 727 227 53 13 chr20 3585973 3586198 -63081807 - LTR16A1 LTR ERVL 0 457 224 408 228 24 31 chr20 3586253 3586380 -63081625 - LTR16A1 LTR ERVL -331 126 1 753 158 8 0 chr20 3586485 3586605 -63081400 + FRAM SINE Alu 48 168 -8 230 91 23 45 chr20 3586658 3586702 -63081303 - MLT1J LTR MaLR -378 133 91 250 272 112 32 chr20 3586756 3586881 -63081124 - MIR3 SINE MIR -41 167 33 23 0 0 0 chr20 3588575 3588598 -63079407 + GC_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr20 3588647 3588670 -63079335 + GC_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr20 3591402 3591437 -63076568 + AT_rich Low_complexity Low_complexity 1 35 0 832 126 0 16 chr20 3591437 3591564 -63076441 - FLAM_C SINE Alu -18 125 1 1486 199 70 0 chr20 3591569 3591955 -63076050 - L1MD3 LINE L1 -8 7987 7575 245 150 0 0 chr20 3592020 3592060 -63075945 + Alu SINE Alu 250 289 -13 2091 108 0 17 chr20 3592119 3592130 -63075875 - AluSq SINE Alu -22 291 281 279 0 0 0 chr20 3592130 3592161 -63075844 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2091 108 0 17 chr20 3592161 3592445 -63075560 - AluSq SINE Alu -32 281 1 1496 117 24 12 chr20 3592445 3592693 -63075312 - LTR43 LTR ERV1 -351 251 1 3904 91 31 25 chr20 3592846 3593230 -63074775 - MER41A LTR ERV1 0 554 165 2335 77 24 0 chr20 3593230 3593528 -63074477 - AluSx SINE Alu -7 305 1 3904 91 31 25 chr20 3593528 3593694 -63074311 - MER41A LTR ERV1 -389 165 1 1227 238 122 45 chr20 3594369 3594392 -63073613 + MER74B LTR ERVL 56 76 -546 2376 97 0 0 chr20 3594392 3594702 -63073303 - AluSq SINE Alu -3 310 1 1227 238 122 45 chr20 3594702 3595186 -63072819 + MER74B LTR ERVL 76 602 -20 253 163 0 20 chr20 3595284 3595333 -63072672 + MLT1K LTR MaLR 502 549 0 236 59 59 59 chr20 3595490 3595558 -63072447 + (CCA)n Simple_repeat Simple_repeat 2 69 0 1738 158 7 3 chr20 3595644 3595929 -63072076 - AluJo SINE Alu -21 291 6 191 191 0 0 chr20 3600659 3600701 -63067304 - MIR SINE MIR -89 119 78 341 145 26 53 chr20 3600860 3600936 -63067069 - MIR SINE MIR -74 188 115 218 211 96 19 chr20 3603714 3603766 -63064239 + MIR SINE MIR 195 250 -12 1980 86 7 14 chr20 3604081 3604359 -63063646 - AluSx SINE Alu 0 312 37 371 266 28 7 chr20 3606378 3606511 -63061494 + MIR SINE MIR 50 191 -17 338 224 172 0 chr20 3606661 3606777 -63061228 + MER69 DNA AcHobo 1 136 -1090 210 71 0 0 chr20 3609596 3609624 -63058381 + (CAG)n Simple_repeat Simple_repeat 2 29 0 232 118 0 59 chr20 3609772 3609823 -63058182 + (CCCCCG)n Simple_repeat Simple_repeat 5 52 0 2412 67 0 0 chr20 3610457 3610757 -63057248 - AluSc SINE Alu -9 300 1 2392 82 3 0 chr20 3610780 3611086 -63056919 - AluSp SINE Alu -6 307 1 1497 178 0 48 chr20 3611416 3611660 -63056345 - AluJo SINE Alu -5 307 80 2382 97 0 0 chr20 3611660 3611970 -63056035 + AluSq SINE Alu 1 310 -3 1497 178 0 48 chr20 3611970 3612039 -63055966 - AluJo SINE Alu -232 80 9 327 306 45 13 chr20 3612083 3612099 -63055906 - L1MA10 LINE L1 -2 6332 6317 1438 239 38 23 chr20 3612099 3612542 -63055463 - L1ME2 LINE L1 -9 6155 5706 811 163 2 9 chr20 3612551 3612720 -63055285 - MLT2B2 LTR ERVL -19 535 322 303 312 113 39 chr20 3612910 3613141 -63054864 + L2 LINE L2 2979 3226 -46 369 188 12 0 chr20 3613747 3613827 -63054178 - L1ME2 LINE L1 -533 5637 5557 * 758 219 139 0 chr20 3613823 3614061 -63053944 + L1ME3A LINE L1 5900 6170 0 185 280 120 13 chr20 3614383 3614458 -63053547 - L2 LINE L2 -29 3284 3202 795 283 111 6 chr20 3615451 3615804 -63052201 + MLT1J LTR MaLR 91 480 -31 1071 192 264 5 chr20 3617944 3618372 -63049633 + MLT1H LTR MaLR 11 549 0 260 313 173 6 chr20 3618403 3618476 -63049529 - MIR SINE MIR -7 255 196 2074 144 0 0 chr20 3618476 3618782 -63049223 - AluSx SINE Alu -1 311 6 260 313 173 6 chr20 3618782 3618887 -63049118 - MIR SINE MIR -66 196 47 378 0 0 0 chr20 3621831 3621873 -63046132 + (CA)n Simple_repeat Simple_repeat 2 43 0 243 303 126 8 chr20 3622827 3622946 -63045059 + L2 LINE L2 3180 3312 -1 1931 119 61 0 chr20 3623476 3623754 -63044251 - AluSx SINE Alu -17 295 1 309 26 0 0 chr20 3623777 3623786 -63044219 + (CA)n Simple_repeat Simple_repeat 1 47 0 309 26 0 0 chr20 3623786 3623824 -63044181 + (CA)n Simple_repeat Simple_repeat 2 39 0 683 280 37 5 chr20 3625889 3626078 -63041927 + MER91A DNA MER1_type 2 196 0 1718 156 13 39 chr20 3627351 3627473 -63040532 + AluJo SINE Alu 1 125 -187 2063 113 10 0 chr20 3627473 3627764 -63040241 - AluSx SINE Alu -18 294 1 2398 97 0 0 chr20 3627764 3628074 -63039931 - AluSx SINE Alu -1 311 1 1718 156 13 39 chr20 3628074 3628258 -63039747 + AluJo SINE Alu 123 300 -12 2334 90 0 6 chr20 3628344 3628655 -63039350 - AluSc SINE Alu 0 309 1 180 370 65 0 chr20 3629461 3629553 -63038452 - MIR SINE MIR -43 219 122 1369 270 107 29 chr20 3629553 3629960 -63038045 + L1MC4 LINE L1 7332 7799 -243 2036 121 3 10 chr20 3629960 3630258 -63037747 + AluSx SINE Alu 1 296 -16 1369 270 107 29 chr20 3630258 3630431 -63037574 + L1MC4 LINE L1 7799 7957 -85 392 228 44 15 chr20 3630534 3630670 -63037335 + L1MC4 LINE L1 7903 8042 0 1960 140 0 23 chr20 3632272 3632580 -63035425 - AluJo SINE Alu -11 301 1 326 247 11 142 chr20 3632580 3632644 -63035361 - MIR SINE MIR -18 244 173 2063 142 3 0 chr20 3632644 3632953 -63035052 - AluSx SINE Alu -2 310 1 326 247 11 142 chr20 3632953 3633078 -63034927 - MIR SINE MIR -89 173 80 242 281 31 0 chr20 3633872 3633936 -63034069 + (CTGGGG)n Simple_repeat Simple_repeat 2 67 0 242 172 78 31 chr20 3635342 3635406 -63032599 + L2 LINE L2 2721 2787 -527 187 263 70 61 chr20 3635778 3635892 -63032113 - L2 LINE L2 -2773 541 427 4048 150 45 42 chr20 3636004 3636140 -63031865 + L1MB4 LINE L1 5022 5156 -1024 1655 142 68 14 chr20 3636140 3636421 -63031584 + AluJo SINE Alu 1 296 -16 2258 93 3 10 chr20 3636422 3636724 -63031281 + AluSc SINE Alu 1 300 -9 4048 150 45 42 chr20 3636724 3637727 -63030278 + L1MB4 LINE L1 5155 6172 -8 21 0 0 0 chr20 3638666 3638687 -63029318 + GC_rich Low_complexity Low_complexity 1 21 0 295 329 32 6 chr20 3639530 3639688 -63028317 + (TTGGGG)n Simple_repeat Simple_repeat 2 163 0 * 298 302 35 18 chr20 3639617 3639786 -63028219 + (TTAGGG)n Simple_repeat Simple_repeat 3 174 0 * 380 249 32 76 chr20 3639737 3639922 -63028083 + (TTGGGG)n Simple_repeat Simple_repeat 3 179 0 2214 128 0 0 chr20 3640818 3641130 -63026875 - AluSx SINE Alu 0 312 1 1774 149 6 40 chr20 3641311 3641634 -63026371 - AluJo SINE Alu 0 312 1 238 333 94 38 chr20 3642097 3642256 -63025749 + MLT1H LTR MaLR 112 279 -270 2112 115 0 0 chr20 3642582 3642868 -63025137 + AluSx SINE Alu 1 286 -26 1898 130 6 56 chr20 3642930 3643254 -63024751 - AluJb SINE Alu -2 310 3 219 284 75 0 chr20 3643257 3643324 -63024681 - MIR SINE MIR -112 150 79 777 262 68 17 chr20 3643341 3643635 -63024370 - MLT1J LTR MaLR -15 496 188 893 199 0 0 chr20 3643639 3643795 -63024210 + FRAM SINE Alu 8 163 -13 234 303 220 23 chr20 3643806 3643938 -63024067 - MLT1J LTR MaLR -317 194 37 198 347 84 0 chr20 3644208 3644303 -63023702 + MIR SINE MIR 5 107 -155 1267 67 0 0 chr20 3644863 3645027 -63022978 + AluY SINE Alu 136 299 -12 1937 111 44 0 chr20 3645035 3645305 -63022700 + AluSx SINE Alu 3 284 -28 314 273 81 20 chr20 3645731 3645830 -63022175 + HAL1 LINE L1 799 903 -1604 1677 184 0 16 chr20 3645830 3646134 -63021871 + AluJb SINE Alu 1 299 -13 336 279 225 0 chr20 3646145 3646274 -63021731 - MLT1J LTR MaLR -317 194 37 618 180 0 9 chr20 3646291 3646443 -63021562 + AluSg/x SINE Alu 196 310 0 2076 109 0 35 chr20 3646485 3646797 -63021208 - AluSx SINE Alu -7 305 5 741 221 75 42 chr20 3646800 3647013 -63020992 - MIR SINE MIR -41 221 2 297 75 0 0 chr20 3647015 3647055 -63020950 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 718 174 8 15 chr20 3647067 3647167 -63020838 + AluJo/FLAM SINE Alu 2 102 -200 1645 181 0 17 chr20 3647167 3647454 -63020551 - AluJb SINE Alu -30 282 1 718 174 8 15 chr20 3647454 3647485 -63020520 + AluJo/FLAM SINE Alu 102 132 -170 426 250 167 57 chr20 3647488 3647680 -63020325 + HAL1 LINE L1 908 1120 -1387 236 206 134 21 chr20 3647827 3647924 -63020081 + MLT1L LTR MaLR 383 490 -125 247 293 46 63 chr20 3648604 3648667 -63019338 + HAL1b LINE L1 747 810 -538 2028 119 0 0 chr20 3648667 3648974 -63019031 + AluSg SINE Alu 3 309 0 247 293 46 63 chr20 3648974 3649083 -63018922 + HAL1b LINE L1 810 917 -431 304 388 8 15 chr20 3649185 3649319 -63018686 + HAL1 LINE L1 2228 2360 -147 421 142 0 43 chr20 3649319 3649586 -63018419 + AluJb SINE Alu 1 312 0 807 192 36 30 chr20 3649968 3650310 -63017695 + Tigger2 DNA MER2_type 1 2707 -11 267 31 0 0 chr20 3650383 3650415 -63017590 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 2154 120 0 0 chr20 3650421 3650721 -63017284 + AluSx SINE Alu 1 300 -12 2094 134 20 64 chr20 3650724 3650879 -63017126 + L1MC2 LINE L1 5182 5342 -1080 1856 122 29 0 chr20 3650879 3651157 -63016848 + AluSx SINE Alu 9 294 -18 2094 134 20 64 chr20 3651157 3651503 -63016502 + L1MC2 LINE L1 5342 5675 -747 1492 171 42 65 chr20 3651504 3651581 -63016424 + AluJo SINE Alu 1 78 -224 2043 130 3 10 chr20 3651581 3651903 -63016102 - AluSx SINE Alu 0 312 1 1492 171 42 65 chr20 3651903 3652134 -63015871 + AluJo SINE Alu 78 302 0 555 141 16 16 chr20 3652143 3652264 -63015741 + GA-rich Low_complexity Low_complexity 4 124 0 2290 143 64 40 chr20 3652279 3652992 -63015013 + L1MC2 LINE L1 5661 6332 -12 812 99 0 0 chr20 3653022 3653133 -63014872 - AluSg/x SINE Alu -14 296 186 1537 111 0 0 chr20 3653133 3653341 -63014664 - AluSx SINE Alu -93 219 12 958 156 6 18 chr20 3653380 3653547 -63014458 + FRAM SINE Alu 1 165 -1 2235 109 3 0 chr20 3653888 3654191 -63013814 + AluSq SINE Alu 1 304 -9 186 43 0 0 chr20 3654220 3654243 -63013762 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 895 192 0 0 chr20 3654255 3654411 -63013594 - AluJb SINE Alu -21 291 136 2296 90 0 0 chr20 3654417 3654716 -63013289 - AluSg SINE Alu -11 299 1 407 265 24 36 chr20 3655083 3655249 -63012756 + L2 LINE L2 2149 2312 -1002 998 307 28 40 chr20 3655259 3655761 -63012244 - MLT1J LTR MaLR -3 508 13 306 329 21 7 chr20 3656183 3656323 -63011682 + L2 LINE L2 2914 3055 -217 317 258 41 10 chr20 3656904 3657001 -63011004 + MIR SINE MIR 92 191 -71 336 234 0 0 chr20 3657134 3657228 -63010777 + (TG)n Simple_repeat Simple_repeat 1 94 0 221 255 94 34 chr20 3657734 3657883 -63010122 - L2 LINE L2 -533 2781 2624 411 290 0 16 chr20 3658613 3658796 -63009209 + (CA)n Simple_repeat Simple_repeat 1 180 0 222 118 0 0 chr20 3659243 3659277 -63008728 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 1426 171 15 15 chr20 3659277 3659546 -63008459 - AluJo SINE Alu -32 280 12 217 174 0 22 chr20 3660069 3660115 -63007890 + CT-rich Low_complexity Low_complexity 6 50 0 31 92 0 0 chr20 3660237 3660324 -63007681 + GC_rich Low_complexity Low_complexity 1 87 0 1003 125 0 0 chr20 3661687 3661831 -63006174 + AluJb SINE Alu 146 289 -23 2023 150 7 0 chr20 3662394 3662694 -63005311 - AluJb SINE Alu -10 302 1 207 223 0 0 chr20 3662900 3662953 -63005052 - MIR SINE MIR -63 145 93 2315 102 0 0 chr20 3663118 3663422 -63004583 - AluSq SINE Alu -9 304 1 269 200 67 0 chr20 3663516 3663576 -63004429 + L2 LINE L2 3205 3268 -4 1038 214 19 5 chr20 3663626 3663832 -63004173 + MER63A DNA MER1_type 1 209 -1 759 205 96 12 chr20 3664347 3664397 -63003608 - MER5A DNA MER1_type -6 183 139 1932 88 0 104 chr20 3664397 3664763 -63003242 + AluSx SINE Alu 1 333 0 759 205 96 12 chr20 3664763 3664877 -63003128 - MER5A DNA MER1_type -50 139 4 184 219 38 95 chr20 3664946 3665051 -63002954 + L2 LINE L2 1687 1785 -1529 417 177 0 0 chr20 3665063 3665125 -63002880 + AluJ/FRAM SINE Alu 231 292 -20 2255 103 0 0 chr20 3665377 3665678 -63002327 + AluSx SINE Alu 1 301 -11 384 263 163 37 chr20 3665814 3666004 -63002001 + L2 LINE L2 3085 3298 -15 442 256 88 37 chr20 3666008 3666223 -63001782 + L1MC5 LINE L1 7558 7783 -178 198 118 0 0 chr20 3666489 3666523 -63001482 + (TG)n Simple_repeat Simple_repeat 1 34 0 1986 145 0 3 chr20 3669006 3669303 -62998702 + AluSx SINE Alu 1 296 -16 1314 120 0 0 chr20 3670345 3670528 -62997477 - AluSg/x SINE Alu -3 309 127 2123 91 3 42 chr20 3670532 3670841 -62997164 - AluY SINE Alu -14 297 1 1847 131 13 55 chr20 3670841 3671153 -62996852 - AluJo SINE Alu -13 299 1 435 235 149 60 chr20 3671184 3671499 -62996506 - L1ME4a LINE L1 -162 5959 5617 247 208 0 0 chr20 3671532 3671585 -62996420 + A-rich Low_complexity Low_complexity 1 53 0 420 308 202 22 chr20 3672142 3672509 -62995496 + L2 LINE L2 2532 2964 -350 204 333 9 27 chr20 3672897 3673008 -62994997 + G-rich Low_complexity Low_complexity 5 113 0 1027 193 104 73 chr20 3673912 3673956 -62994049 - LTR16A1 LTR ERVL 0 457 416 2584 33 7 0 chr20 3673956 3674258 -62993747 - AluY SINE Alu -7 304 1 1027 193 104 73 chr20 3674258 3674597 -62993408 - LTR16A1 LTR ERVL -41 416 62 412 317 42 24 chr20 3678739 3678906 -62989099 + MIR SINE MIR 82 251 -11 355 257 22 37 chr20 3680545 3680681 -62987324 + MIR3 SINE MIR 10 143 -65 255 318 145 0 chr20 3684354 3684533 -62983472 + L1ME4a LINE L1 5613 5817 -304 198 0 0 0 chr20 3684683 3684705 -62983300 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2184 88 7 3 chr20 3684725 3685019 -62982986 + AluSc SINE Alu 1 295 -14 308 272 68 0 chr20 3685020 3685123 -62982882 + L1ME4a LINE L1 5974 6083 -38 1480 117 14 0 chr20 3685284 3685498 -62982507 - AluSg/x SINE Alu -9 303 87 343 282 188 0 chr20 3685782 3685931 -62982074 - MIR SINE MIR -57 205 29 180 352 63 19 chr20 3686549 3686708 -62981297 - MIR3 SINE MIR -24 184 19 228 111 0 0 chr20 3687610 3687646 -62980359 + (CA)n Simple_repeat Simple_repeat 1 36 0 335 341 16 8 chr20 3688511 3688640 -62979365 + L1MC4a LINE L1 6873 7002 -806 401 296 63 12 chr20 3688703 3688951 -62979054 + L1MC4a LINE L1 7005 7228 -620 2301 108 0 0 chr20 3688987 3689292 -62978713 - AluSq SINE Alu -8 305 1 439 263 33 19 chr20 3689406 3689602 -62978403 + L1MC5 LINE L1 7268 7492 -522 198 0 0 0 chr20 3689614 3689636 -62978369 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 1999 116 48 0 chr20 3689662 3689956 -62978049 + AluSg SINE Alu 1 308 -2 1493 142 124 8 chr20 3690040 3690307 -62977698 - AluJb SINE Alu -13 299 2 633 179 69 58 chr20 3690314 3690487 -62977518 + MER58B DNA MER1_type 167 341 0 2412 80 0 0 chr20 3690631 3690932 -62977073 + AluSx SINE Alu 2 302 -10 2334 63 7 3 chr20 3690932 3691233 -62976772 + AluSp SINE Alu 1 302 -11 328 273 141 16 chr20 3691248 3691369 -62976636 + L1MC5 LINE L1 7609 7744 -217 450 329 136 30 chr20 3692028 3692396 -62975609 + L2 LINE L2 2864 3270 -2 420 279 71 7 chr20 3693014 3693154 -62974851 + MIR SINE MIR 25 173 -89 189 273 0 65 chr20 3694923 3695000 -62973005 - MIR SINE MIR -76 132 61 301 335 47 16 chr20 3696728 3696919 -62971086 + Charlie8 DNA MER1_type 4 200 -2217 1985 105 0 34 chr20 3697118 3697433 -62970572 - AluSx SINE Alu 0 305 1 248 259 111 0 chr20 3697554 3697635 -62970370 - L2 LINE L2 -5 3267 3178 2520 53 0 0 chr20 3698084 3698385 -62969620 + AluY SINE Alu 1 301 -10 804 167 0 36 chr20 3698472 3698610 -62969395 - FLAM_C SINE Alu 0 133 1 1044 168 0 0 chr20 3698708 3698869 -62969136 - FRAM SINE Alu -5 161 1 1391 202 3 63 chr20 3698880 3699197 -62968808 - AluSx SINE Alu -4 298 1 578 231 1 0 chr20 3699199 3699336 -62968669 - L1ME LINE L1 -551 5611 5474 261 0 0 0 chr20 3699474 3699503 -62968502 + (CA)n Simple_repeat Simple_repeat 2 30 0 1463 123 0 5 chr20 3699503 3699723 -62968282 + AluSg/x SINE Alu 91 309 -1 720 223 32 40 chr20 3699726 3699977 -62968028 + L1MC4a LINE L1 5589 5837 -1971 1240 149 0 0 chr20 3699978 3700159 -62967846 - AluSx SINE Alu -131 181 1 928 242 65 87 chr20 3700175 3700610 -62967395 - MLT2B3 LTR ERVL 0 554 128 2280 104 0 0 chr20 3700610 3700918 -62967087 - AluSx SINE Alu -4 308 1 928 242 65 87 chr20 3700918 3700944 -62967061 - MLT2B3 LTR ERVL -426 128 103 1641 171 38 3 chr20 3700945 3701237 -62966768 + AluSx SINE Alu 1 302 -10 232 374 146 0 chr20 3701420 3701543 -62966462 + L2 LINE L2 3132 3272 0 1588 183 0 64 chr20 3701592 3701744 -62966261 + AluJb SINE Alu 1 124 -188 2048 120 10 0 chr20 3701744 3702035 -62965970 + AluSx SINE Alu 3 296 -16 1588 183 0 64 chr20 3702035 3702194 -62965811 + AluJb SINE Alu 124 292 -20 2282 113 0 0 chr20 3702203 3702513 -62965492 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr20 3702513 3702534 -62965471 + AT_rich Low_complexity Low_complexity 1 21 0 701 204 17 28 chr20 3702534 3702717 -62965288 - MLT1E LTR MaLR -381 186 1 25 51 0 0 chr20 3702936 3702975 -62965030 + AT_rich Low_complexity Low_complexity 1 39 0 1269 250 31 34 chr20 3703519 3703871 -62964134 + MLT1E LTR MaLR 243 593 0 2090 133 3 3 chr20 3703914 3704222 -62963783 + AluSx SINE Alu 1 308 -4 246 205 0 162 chr20 3704222 3704339 -62963666 - L1ME LINE L1 -460 5710 5613 2012 119 10 3 chr20 3704340 3704634 -62963371 - AluSq SINE Alu -17 296 1 25 31 0 0 chr20 3705836 3705868 -62962137 + GC_rich Low_complexity Low_complexity 1 32 0 2223 97 13 3 chr20 3707718 3708018 -62959987 + AluSx SINE Alu 7 309 -3 315 0 0 0 chr20 3708073 3708108 -62959897 + (CA)n Simple_repeat Simple_repeat 1 35 0 207 254 68 0 chr20 3709610 3709669 -62958336 + MIR SINE MIR 88 150 -112 2130 111 6 16 chr20 3709742 3710057 -62957948 + AluSx SINE Alu 1 312 0 206 255 235 10 chr20 3710157 3710259 -62957746 + MIR SINE MIR 76 200 -62 243 177 0 0 chr20 3712527 3712589 -62955416 + (CAT)n Simple_repeat Simple_repeat 3 64 0 711 179 0 0 chr20 3712786 3712931 -62955074 + CT-rich Low_complexity Low_complexity 2 146 0 75 45 0 0 chr20 3714140 3714250 -62953755 + GC_rich Low_complexity Low_complexity 1 110 0 221 246 24 24 chr20 3714264 3714390 -62953615 + G-rich Low_complexity Low_complexity 6 131 0 * 243 209 29 43 chr20 3714318 3714457 -62953548 + (CGGG)n Simple_repeat Simple_repeat 4 140 0 544 292 89 30 chr20 3714691 3715061 -62952944 - L1ME4a LINE L1 0 6121 5730 294 271 66 0 chr20 3715120 3715242 -62952763 - L1ME4a LINE L1 -93 6028 5899 570 245 87 25 chr20 3715405 3715509 -62952496 - L2 LINE L2 -1106 2208 2112 2063 115 0 7 chr20 3715509 3715821 -62952184 + AluSx SINE Alu 1 310 0 570 245 87 25 chr20 3715821 3715911 -62952094 - L2 LINE L2 -1202 2112 2001 477 277 133 3 chr20 3715941 3716241 -62951764 - L1ME4a LINE L1 -757 5389 5051 683 183 0 23 chr20 3716367 3716542 -62951463 + CT-rich Low_complexity Low_complexity 2 172 0 180 0 0 0 chr20 3716546 3716566 -62951439 + (TTTCC)n Simple_repeat Simple_repeat 5 24 0 558 202 0 0 chr20 3716885 3716984 -62951021 - AluJo/FRAM SINE Alu -6 306 208 274 146 0 0 chr20 3716985 3717026 -62950979 - AluSp SINE Alu -129 174 134 2100 123 0 3 chr20 3717026 3717327 -62950678 - AluSx SINE Alu -12 300 1 29 0 0 0 chr20 3717327 3717356 -62950649 + AT_rich Low_complexity Low_complexity 1 29 0 * 803 213 7 36 chr20 3717351 3717368 -62950637 + FRAM SINE Alu 1 17 -295 2446 52 0 0 chr20 3717368 3717659 -62950346 + AluY SINE Alu 5 295 -16 803 213 7 36 chr20 3717659 3717836 -62950169 + FRAM SINE Alu 17 176 0 607 131 0 0 chr20 3717852 3717936 -62950069 + AluSg/x SINE Alu 209 292 -18 395 125 219 31 chr20 3717937 3718033 -62949972 - L1MB8 LINE L1 -10 6168 6055 784 81 16 49 chr20 3718033 3718156 -62949849 - AluSg/x SINE Alu -10 299 181 531 61 0 0 chr20 3718197 3718263 -62949742 + Alu SINE Alu 2 67 -243 1813 129 4 0 chr20 3718263 3718526 -62949479 - AluSq SINE Alu -49 264 1 970 102 0 0 chr20 3718526 3718654 -62949351 - AluJb SINE Alu -176 136 9 1563 188 10 0 chr20 3719059 3719357 -62948648 + AluJb SINE Alu 3 303 -9 2171 121 0 0 chr20 3719559 3719865 -62948140 - AluSx SINE Alu -1 311 6 1286 198 0 54 chr20 3719979 3720117 -62947888 - AluJo SINE Alu -11 301 157 2092 109 0 3 chr20 3720117 3720421 -62947584 - AluSg SINE Alu -6 304 2 1286 198 0 54 chr20 3720421 3720595 -62947410 - AluJo SINE Alu -155 157 6 1004 146 99 4 chr20 3720599 3720832 -62947173 + MER33 DNA MER1_type 39 293 -31 2210 93 3 0 chr20 3720832 3721132 -62946873 + AluSx SINE Alu 1 301 -11 292 40 40 20 chr20 3721229 3721279 -62946726 + (TTTTA)n Simple_repeat Simple_repeat 1 51 0 6821 17 1 0 chr20 3721279 3722041 -62945964 - L1PA3 LINE L1 -24 6131 5369 2102 98 7 3 chr20 3722736 3723043 -62944962 + AluSg SINE Alu 1 308 -2 300 261 45 11 chr20 3723463 3723551 -62944454 + MIR SINE MIR 55 145 -117 338 207 0 45 chr20 3723999 3724110 -62943895 + CT-rich Low_complexity Low_complexity 3 108 0 198 0 0 0 chr20 3725972 3725994 -62942011 + (T)n Simple_repeat Simple_repeat 1 22 0 358 266 117 33 chr20 3726375 3726589 -62941416 - Charlie8 DNA MER1_type -2185 232 1 378 0 0 0 chr20 3727141 3727183 -62940822 + (TG)n Simple_repeat Simple_repeat 1 42 0 1256 199 101 38 chr20 3732591 3732679 -62935326 - MER2 DNA MER2_type -8 337 256 2134 101 3 3 chr20 3732679 3732977 -62935028 + AluSx SINE Alu 1 298 -14 1256 199 101 38 chr20 3732977 3733205 -62934800 - MER2 DNA MER2_type -89 256 1 274 231 56 28 chr20 3733736 3733844 -62934161 - L1ME4a LINE L1 -43 6078 5968 21 36 0 0 chr20 3733974 3734002 -62934003 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 3734165 3734188 -62933817 + AT_rich Low_complexity Low_complexity 1 23 0 1515 147 0 0 chr20 3734402 3734627 -62933378 + AluSq SINE Alu 1 225 -88 898 178 0 32 chr20 3734627 3734812 -62933193 - L1P LINE L1 -1290 4856 4678 475 230 35 18 chr20 3735231 3735344 -62932661 + L2 LINE L2 754 868 -2446 1386 218 62 87 chr20 3735358 3735565 -62932440 + LTR16A1 LTR ERVL 1 212 -245 457 206 124 0 chr20 3735565 3735662 -62932343 - MER81 DNA DNA -4 110 2 1386 218 62 87 chr20 3735662 3735923 -62932082 + LTR16A1 LTR ERVL 212 457 0 204 286 91 13 chr20 3735926 3736003 -62932002 + L2 LINE L2 880 962 -2352 555 306 43 14 chr20 3736010 3736219 -62931786 + L2 LINE L2 1290 1504 -1810 563 220 61 0 chr20 3736223 3736355 -62931650 + MER3 DNA MER1_type 1 140 -69 1870 238 88 13 chr20 3736357 3736882 -62931123 + L2 LINE L2 1931 2494 -820 1948 222 126 69 chr20 3736895 3737449 -62930556 - MLT1E LTR MaLR -6 587 2 251 235 0 0 chr20 3737456 3737507 -62930498 + L2 LINE L2 2507 2557 -757 507 345 132 20 chr20 3737760 3738399 -62929606 + L2 LINE L2 2583 3310 -3 2215 71 4 0 chr20 3738664 3739004 -62929001 - AluY SINE Alu 0 341 1 2550 19 7 10 chr20 3739361 3739670 -62928335 - AluY SINE Alu -3 308 1 1830 213 89 39 chr20 3741647 3742234 -62925771 + HAL1b LINE L1 351 966 -382 427 256 81 121 chr20 3742437 3742883 -62925122 - L1ME4a LINE L1 -96 6025 5598 318 259 173 7 chr20 3742809 3742948 -62925057 + HAL1b LINE L1 947 1108 -240 * 461 193 67 47 chr20 3742963 3743113 -62924892 + HAL1b LINE L1 1196 1348 0 373 172 32 11 chr20 3744403 3744496 -62923509 - L1MB3 LINE L1 -2 6181 6087 2693 108 31 7 chr20 3744504 3744929 -62923076 - L1MA4 LINE L1 -282 6018 5584 2138 78 0 7 chr20 3745406 3745716 -62922289 + AluSx SINE Alu 3 310 0 24 0 0 0 chr20 3745836 3745860 -62922145 + AT_rich Low_complexity Low_complexity 1 24 0 1600 161 14 7 chr20 3746100 3746391 -62921614 - AluJo SINE Alu -19 293 1 1227 198 20 4 chr20 3748222 3748470 -62919535 - L1MB3 LINE L1 0 6183 5932 362 302 47 13 chr20 3748682 3748831 -62919174 - L2 LINE L2 -220 3052 2899 2162 92 0 0 chr20 3749149 3749432 -62918573 + AluY SINE Alu 1 283 -28 1809 104 9 95 chr20 3749851 3750188 -62917817 + AluSx SINE Alu 1 308 -4 2075 109 6 10 chr20 3750982 3751293 -62916712 + AluSx SINE Alu 1 310 -2 239 239 90 45 chr20 3751627 3751694 -62916311 + L2 LINE L2 3185 3254 -18 2262 75 7 7 chr20 3752371 3752676 -62915329 + AluY SINE Alu 1 305 -6 1024 133 0 6 chr20 3752724 3752882 -62915123 + FRAM SINE Alu 1 153 -23 3229 206 19 13 chr20 3752898 3753525 -62914480 + MER82 DNA MER2_type 1 631 -22 2710 125 101 9 chr20 3753542 3753997 -62914008 - Tigger3(Golem) DNA MER2_type -2 3027 2531 253 260 0 0 chr20 3754001 3754051 -62913954 - Tigger3(Golem) DNA MER2_type -2969 60 11 1926 155 0 0 chr20 3754152 3754449 -62913556 + AluJo SINE Alu 1 297 -15 956 229 122 17 chr20 3754453 3754807 -62913198 - L1MC5 LINE L1 -311 7650 7260 * 1028 196 27 162 chr20 3754775 3755294 -62912711 - L1MC5 LINE L1 -902 7059 6611 1986 212 41 39 chr20 3755377 3755569 -62912436 - L1MC5 LINE L1 -1907 5901 5711 881 48 112 0 chr20 3755569 3755694 -62912311 - MER85 DNA T2_type 0 139 1 1986 212 41 39 chr20 3755694 3756063 -62911942 - L1MC5 LINE L1 -2097 5711 5339 494 368 84 19 chr20 3756074 3756490 -62911515 - L1MC5 LINE L1 -878 5268 4826 26 0 0 0 chr20 3756572 3756598 -62911407 + AT_rich Low_complexity Low_complexity 1 26 0 958 129 0 0 chr20 3756897 3757029 -62910976 + FLAM_A SINE Alu 1 132 -1 733 173 8 23 chr20 3757603 3757736 -62910269 + MER3 DNA MER1_type 1 131 -78 185 0 0 39 chr20 3757736 3757762 -62910243 + (TTTAA)n Simple_repeat Simple_repeat 1 25 0 1492 139 123 0 chr20 3758096 3758394 -62909611 - AluSx SINE Alu 0 329 1 1773 141 10 20 chr20 3758586 3758884 -62909121 + AluJo SINE Alu 1 295 -17 2123 105 0 20 chr20 3759313 3759619 -62908386 - AluSg SINE Alu -10 300 1 263 270 0 24 chr20 3760836 3760931 -62907074 - MIR3 SINE MIR -3 205 113 687 84 0 0 chr20 3761027 3761122 -62906883 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 187 232 18 54 chr20 3761863 3761919 -62906086 - L2 LINE L2 -2075 1239 1186 2230 119 0 0 chr20 3763577 3763889 -62904116 + AluSx SINE Alu 1 312 0 1753 140 3 37 chr20 3765333 3765633 -62902372 + AluJo SINE Alu 1 290 -22 1080 150 155 19 chr20 3765862 3766069 -62901936 - MER46A DNA MER2_type -1 235 1 822 159 0 36 chr20 3766331 3766469 -62901536 + FLAM_C SINE Alu 1 133 0 210 235 0 0 chr20 3767066 3767117 -62900888 + A-rich Low_complexity Low_complexity 4 54 0 250 226 19 0 chr20 3767842 3767895 -62900110 + MER112 DNA MER1_type 195 248 -12 2247 103 0 3 chr20 3767900 3768210 -62899795 + AluSc SINE Alu 1 309 0 302 362 0 0 chr20 3768707 3768823 -62899182 + MIR3 SINE MIR 84 199 -9 375 276 79 49 chr20 3769647 3769850 -62898155 + L1MB8 LINE L1 5181 5389 -757 3151 164 109 50 chr20 3770024 3770819 -62897186 + L1MB7 LINE L1 5195 6033 -151 605 188 187 26 chr20 3770847 3771036 -62896969 + L1MB8 LINE L1 5845 6050 -120 565 171 130 41 chr20 3771036 3771182 -62896823 + L1MB8 LINE L1 5845 6003 -175 3691 198 40 19 chr20 3771195 3772195 -62895810 - L1M4 LINE L1 -609 5575 4549 1746 134 3 11 chr20 3772195 3772520 -62895485 - AluJb SINE Alu 0 323 1 3691 198 40 19 chr20 3772520 3772625 -62895380 - L1M4 LINE L1 -1635 4549 4448 2368 225 59 29 chr20 3772617 3773349 -62894656 - L1M4 LINE L1 -2049 4097 3344 * 2115 83 3 58 chr20 3773349 3773674 -62894331 - AluSc SINE Alu -2 307 1 2164 99 0 3 chr20 3774333 3774627 -62893378 - AluSq SINE Alu -20 293 1 265 196 0 0 chr20 3774808 3774859 -62893146 - MER91 DNA MER1_type -88 52 2 412 274 137 25 chr20 3774919 3775116 -62892889 + L1ME4a LINE L1 5658 5876 -245 307 236 96 0 chr20 3775164 3775289 -62892716 + L1ME4a LINE L1 1200 6040 -7 2223 212 98 26 chr20 3775812 3776453 -62891552 - MER76 LTR ERV -1 687 1 2318 97 0 0 chr20 3776494 3776804 -62891201 + AluSx SINE Alu 1 310 -2 226 214 243 0 chr20 3777435 3777505 -62890500 - MIR SINE MIR -97 111 25 692 280 129 4 chr20 3777735 3777960 -62890045 - MIR SINE MIR -1 261 9 187 286 14 29 chr20 3777985 3778055 -62889950 - MIR SINE MIR -193 69 1 261 197 106 15 chr20 3778492 3778558 -62889447 + L2 LINE L2 3241 3312 -1 282 29 0 0 chr20 3781431 3781466 -62886539 + (TA)n Simple_repeat Simple_repeat 2 36 0 1023 220 69 12 chr20 3781466 3781878 -62886127 + L1ME3A LINE L1 5032 5462 -704 962 190 23 36 chr20 3781885 3782106 -62885899 - Charlie1 DNA MER1_type -284 2477 2260 286 331 11 56 chr20 3782479 3782657 -62885348 + Charlie7 DNA MER1_type 24 193 -2419 1695 268 158 39 chr20 3782851 3783779 -62884226 + Charlie7 DNA MER1_type 483 1521 -1091 296 227 171 11 chr20 3784699 3784787 -62883218 + MIR SINE MIR 13 114 -148 261 183 97 11 chr20 3784972 3785065 -62882940 - Charlie7 DNA MER1_type -69 2543 2443 440 313 75 0 chr20 3786135 3786295 -62881710 + L1ME3A LINE L1 5477 5648 -514 330 220 35 165 chr20 3786335 3786462 -62881543 + MER112 DNA MER1_type 81 174 -86 378 0 0 0 chr20 3786462 3786504 -62881501 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 330 220 35 165 chr20 3786504 3786576 -62881429 + MER112 DNA MER1_type 174 254 -6 272 309 72 28 chr20 3786601 3786850 -62881155 + L1ME3A LINE L1 5689 5948 -222 2309 80 0 32 chr20 3786911 3787222 -62880783 + AluSg SINE Alu 1 301 -9 464 333 145 43 chr20 3787425 3787824 -62880181 + HAL1 LINE L1 1130 1569 -938 1952 152 29 17 chr20 3787828 3788176 -62879829 - LOR1b LTR ERV1 0 461 110 193 191 0 0 chr20 3791904 3791946 -62876059 - MIR SINE MIR -89 119 78 358 152 16 64 chr20 3792105 3792199 -62875806 - MIR SINE MIR -74 188 102 247 267 91 95 chr20 3792856 3793077 -62874928 + L2 LINE L2 2550 2769 -545 219 88 0 0 chr20 3794380 3794414 -62873591 + (TGGA)n Simple_repeat Simple_repeat 2 35 0 2160 115 0 0 chr20 3795022 3795318 -62872687 + AluSg SINE Alu 1 296 -14 189 190 0 103 chr20 3795598 3795656 -62872349 - MIR SINE MIR -94 168 117 190 264 23 46 chr20 3796082 3796169 -62871836 - MIR SINE MIR -59 149 65 205 250 21 0 chr20 3796315 3796363 -62871642 - L2 LINE L2 -15 3257 3209 4360 196 133 101 chr20 3846853 3847105 -62820900 + L1MDa LINE L1 285 527 -6013 1685 81 0 5 chr20 3847105 3847314 -62820691 - AluSc SINE Alu -14 295 88 4360 196 133 101 chr20 3847314 3848096 -62819909 + L1MDa LINE L1 527 1282 -5258 1449 112 0 0 chr20 3848096 3848283 -62819722 + AluSq SINE Alu 1 187 -126 4360 196 133 101 chr20 3848283 3849950 -62818055 + L1MDa LINE L1 1282 3349 -3191 2215 118 3 0 chr20 3849950 3850239 -62817766 + AluSx SINE Alu 1 290 -22 1789 157 57 23 chr20 3851403 3851570 -62816435 - AluJb SINE Alu -2 310 127 2370 94 7 16 chr20 3851570 3851878 -62816127 - AluSx SINE Alu -7 305 1 1789 157 57 23 chr20 3851878 3852010 -62815995 - AluJb SINE Alu -185 127 1 701 209 62 74 chr20 3852138 3852573 -62815432 + L1MDa LINE L1 3385 3814 -2726 382 257 27 14 chr20 3852637 3852782 -62815223 + L1MDa LINE L1 4420 4560 -1980 1136 89 19 25 chr20 3852886 3853044 -62814961 - AluY SINE Alu -154 157 1 234 0 0 0 chr20 3853495 3853521 -62814484 + (TG)n Simple_repeat Simple_repeat 1 26 0 2176 108 0 0 chr20 3853521 3853799 -62814206 - AluSx SINE Alu -33 279 2 1207 220 186 47 chr20 3854312 3854781 -62813224 - MLT1H LTR MaLR 0 549 16 822 251 40 12 chr20 3858886 3859133 -62808872 + MIR SINE MIR 9 262 0 1379 113 35 15 chr20 3859158 3859361 -62808644 + AluJo SINE Alu 90 296 -16 2202 118 3 0 chr20 3860104 3860400 -62807605 + AluSx SINE Alu 1 297 -15 1095 149 0 39 chr20 3860466 3860647 -62807358 + AluSg/x SINE Alu 119 292 -18 1351 176 112 32 chr20 3860758 3860920 -62807085 - AluJo SINE Alu -8 304 156 2550 62 0 3 chr20 3860920 3861224 -62806781 - AluY SINE Alu -8 303 1 1351 176 112 32 chr20 3861224 3861339 -62806666 - AluJo SINE Alu -156 156 5 2282 105 10 0 chr20 3861351 3861655 -62806350 - AluSx SINE Alu -5 307 1 863 150 0 0 chr20 3862269 3862428 -62805577 + FLAM_C SINE Alu 1 159 0 483 214 23 30 chr20 3862501 3862632 -62805373 - L1MC5 LINE L1 -51 7910 7781 2326 102 3 0 chr20 3862638 3862932 -62805073 - AluSq SINE Alu -18 295 1 478 217 19 0 chr20 3863655 3863761 -62804244 - MIR SINE MIR -25 237 130 1790 183 7 0 chr20 3863909 3864193 -62803812 + AluJo SINE Alu 1 286 -26 252 235 141 0 chr20 3864567 3864652 -62803353 - L2 LINE L2 -6 3307 3211 1581 249 70 50 chr20 3864839 3864913 -62803092 + L1ME3A LINE L1 5483 5554 -616 1665 181 27 51 chr20 3864913 3865002 -62803003 + MLT1A1 LTR MaLR 1 91 -274 2116 131 3 7 chr20 3865002 3865299 -62802706 + AluSx SINE Alu 1 296 -16 1665 181 27 51 chr20 3865299 3865580 -62802425 + MLT1A1 LTR MaLR 91 362 -3 1581 249 70 50 chr20 3865580 3866104 -62801901 + L1ME3A LINE L1 5554 6093 -77 1246 195 80 33 chr20 3866125 3866571 -62801434 - MER89 LTR ERV1 0 559 3 1700 189 3 7 chr20 3866883 3867184 -62800821 + AluJo SINE Alu 1 300 -12 23 0 0 0 chr20 3867218 3867241 -62800764 + AT_rich Low_complexity Low_complexity 1 23 0 1832 172 7 7 chr20 3868113 3868415 -62799590 - AluJo SINE Alu -6 306 5 1163 253 43 16 chr20 3868498 3868849 -62799156 + L1MC4a LINE L1 5560 5923 -1885 1772 100 21 8 chr20 3868849 3869089 -62798916 + AluSc SINE Alu 1 243 -66 1163 253 43 16 chr20 3869089 3869108 -62798897 + L1MC4a LINE L1 5923 5940 -1868 2258 96 3 26 chr20 3869164 3869299 -62798706 + AluSg SINE Alu 1 138 -172 2114 72 14 51 chr20 3869299 3869592 -62798413 + AluY SINE Alu 3 284 -27 216 0 0 0 chr20 3869592 3869616 -62798389 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1173 111 0 6 chr20 3869616 3869792 -62798213 + AluSc SINE Alu 131 305 -4 2149 122 7 0 chr20 3869794 3870089 -62797916 + AluSx SINE Alu 3 299 -13 549 147 76 152 chr20 3870095 3870306 -62797699 + L1MC5 LINE L1 6942 7136 -825 1846 124 3 14 chr20 3870306 3870588 -62797417 + AluSx SINE Alu 1 279 -33 360 0 0 0 chr20 3870588 3870628 -62797377 + (CA)n Simple_repeat Simple_repeat 1 40 0 1612 151 0 25 chr20 3870806 3871085 -62796920 + AluJo SINE Alu 35 306 -6 2172 104 7 0 chr20 3871143 3871440 -62796565 + AluSp SINE Alu 1 299 -14 462 161 129 0 chr20 3871510 3871603 -62796402 - FLAM_A SINE Alu -18 124 20 2260 75 0 30 chr20 3871742 3872047 -62795958 + AluY SINE Alu 1 296 -15 1968 102 46 0 chr20 3872270 3872553 -62795452 - AluSx SINE Alu -16 296 1 2113 89 0 17 chr20 3872742 3873034 -62794971 - AluSg1 SINE Alu -20 289 3 549 110 12 12 chr20 3873038 3873120 -62794885 - AluSg/x SINE Alu -19 290 209 1776 159 7 0 chr20 3873339 3873635 -62794370 + AluJb SINE Alu 1 298 -14 2415 50 0 10 chr20 3873636 3873936 -62794069 + AluY SINE Alu 1 297 -14 1989 109 30 10 chr20 3873944 3874246 -62793759 + AluSx SINE Alu 1 308 -4 2065 89 0 0 chr20 3874385 3874654 -62793351 + AluSp SINE Alu 34 302 -11 263 351 123 9 chr20 3874753 3874777 -62793228 - L2 LINE L2 -449 2865 2845 2485 61 0 6 chr20 3874777 3875089 -62792916 + AluY SINE Alu 2 311 0 263 351 123 9 chr20 3875089 3875292 -62792713 - L2 LINE L2 -469 2845 2612 2536 46 0 0 chr20 3875343 3875648 -62792357 - AluY SINE Alu -4 307 3 1812 138 14 0 chr20 3875698 3875989 -62792016 - AluJb SINE Alu -17 295 1 1858 120 22 0 chr20 3876018 3876326 -62791679 + AluSx SINE Alu 1 314 0 2047 117 3 0 chr20 3876971 3877270 -62790735 - AluSx SINE Alu -12 300 1 2140 202 90 12 chr20 3877413 3877893 -62790112 + MLT1F LTR MaLR 14 530 -12 2371 70 3 0 chr20 3878138 3878440 -62789565 - AluY SINE Alu -8 303 1 34 24 0 0 chr20 3878442 3878483 -62789522 + AT_rich Low_complexity Low_complexity 1 41 0 414 198 119 8 chr20 3878551 3878677 -62789328 - L1ME3A LINE L1 -9 6161 6022 2134 118 0 3 chr20 3878692 3878997 -62789008 - AluSx SINE Alu -8 304 1 25 0 0 0 chr20 3878997 3879022 -62788983 + AT_rich Low_complexity Low_complexity 1 25 0 2065 96 6 25 chr20 3879052 3879366 -62788639 - AluSg SINE Alu -2 308 1 180 315 0 19 chr20 3879413 3879467 -62788538 + MIR SINE MIR 58 110 -98 904 111 131 0 chr20 3879983 3880136 -62787869 - AluSp SINE Alu -8 305 133 1660 149 6 43 chr20 3882788 3883111 -62784894 - AluJo SINE Alu -1 311 1 420 272 194 11 chr20 3883124 3883304 -62784701 - MIR SINE MIR -48 214 2 2057 101 10 26 chr20 3883805 3884112 -62783893 + AluSx SINE Alu 1 302 -10 1458 75 10 10 chr20 3884243 3884443 -62783562 + AluSg/x SINE Alu 98 297 -12 258 311 40 0 chr20 3884602 3884676 -62783329 + MER5A DNA MER1_type 76 152 -37 685 297 48 9 chr20 3884785 3885014 -62782991 - MIR SINE MIR -5 257 20 226 121 379 0 chr20 3885147 3885213 -62782792 - L1ME1 LINE L1 -4 6162 6072 2046 132 7 0 chr20 3885672 3885982 -62782023 - AluSq SINE Alu -1 312 1 2184 97 10 0 chr20 3885991 3886291 -62781714 - AluSp SINE Alu -10 303 1 1121 148 0 0 chr20 3886324 3886500 -62781505 - AluSg/x SINE Alu -6 306 131 1570 160 19 0 chr20 3886760 3887056 -62780949 + AluSx SINE Alu 13 313 0 835 136 0 102 chr20 3887057 3887234 -62780771 + AluJo SINE Alu 124 282 -30 204 40 0 0 chr20 3887236 3887261 -62780744 + (T)n Simple_repeat Simple_repeat 1 25 0 2156 73 0 54 chr20 3887814 3888129 -62779876 - AluY SINE Alu -13 298 1 3494 191 109 19 chr20 3888158 3888940 -62779065 + MER21B LTR ERV1 1 852 -11 1737 150 29 26 chr20 3889170 3889477 -62778528 + AluJb SINE Alu 1 308 -4 1944 118 14 7 chr20 3889478 3889767 -62778238 + AluSx SINE Alu 3 293 -19 343 273 188 13 chr20 3889787 3889941 -62778064 - L1M4 LINE L1 -2207 3939 3759 2047 122 7 0 chr20 3889944 3890247 -62777758 - AluSx SINE Alu -3 309 5 319 251 166 33 chr20 3890269 3890576 -62777429 - L1M4 LINE L1 -3116 3030 2683 2043 113 7 3 chr20 3890624 3890925 -62777080 - AluSg SINE Alu -8 302 1 1909 139 7 3 chr20 3890928 3891222 -62776783 - AluSx SINE Alu -17 295 1 2291 70 10 0 chr20 3891455 3891755 -62776250 - AluY SINE Alu -8 303 1 28 0 0 0 chr20 3892501 3892529 -62775476 + AT_rich Low_complexity Low_complexity 1 28 0 2013 96 0 4 chr20 3892530 3892801 -62775204 - AluSx SINE Alu -22 290 21 1446 163 48 4 chr20 3892805 3893099 -62774906 - AluJo SINE Alu 0 306 1 533 235 161 23 chr20 3893508 3893768 -62774237 - HAL1 LINE L1 -821 1686 1391 959 181 42 28 chr20 3893915 3894130 -62773875 - AluJo SINE Alu -9 303 86 406 133 8 4 chr20 3894131 3894245 -62773760 - AluSg/x SINE Alu -52 248 84 1085 198 0 31 chr20 3894245 3894472 -62773533 - AluJo SINE Alu -92 220 1 305 242 0 21 chr20 3894628 3894653 -62773352 - L1MA10 LINE L1 -1 6333 6309 680 265 78 39 chr20 3894653 3894724 -62773281 - L1ME1 LINE L1 -15 6151 6084 414 0 0 0 chr20 3894724 3894770 -62773235 + (CA)n Simple_repeat Simple_repeat 2 47 0 680 265 78 39 chr20 3894770 3894890 -62773115 - L1ME1 LINE L1 -82 6084 5970 2087 123 0 10 chr20 3894890 3895199 -62772806 - AluSx SINE Alu -6 306 1 1473 121 6 118 chr20 3895205 3895383 -62772622 - AluSc SINE Alu 0 309 187 2094 108 0 3 chr20 3895383 3895678 -62772327 - AluSg SINE Alu -16 294 1 1473 121 6 118 chr20 3895678 3895847 -62772158 - AluSc SINE Alu -122 187 1 680 265 78 39 chr20 3895847 3895979 -62772026 - L1ME1 LINE L1 -200 5966 5807 263 203 105 105 chr20 3895999 3896050 -62771955 - L1MD2 LINE L1 -137 6222 6172 1439 186 47 10 chr20 3896050 3896351 -62771654 + AluJo SINE Alu 1 312 0 263 203 105 105 chr20 3896351 3896432 -62771573 - L1MD2 LINE L1 -186 6173 6090 2355 47 14 3 chr20 3897102 3897398 -62770607 - AluY SINE Alu -12 299 1 2162 91 3 3 chr20 3897469 3897767 -62770238 - AluSx SINE Alu -14 298 1 1414 149 45 128 chr20 3897821 3897894 -62770111 - MER47A DNA MER2_type -1957 366 289 1752 171 10 0 chr20 3897894 3898192 -62769813 + AluJb SINE Alu 1 301 -11 1414 149 45 128 chr20 3898192 3898515 -62769490 - MER47A DNA MER2_type -2034 289 3 2031 118 7 0 chr20 3898557 3898846 -62769159 - AluSc SINE Alu -18 291 1 1920 141 20 3 chr20 3898851 3899150 -62768855 - AluSx SINE Alu -8 304 1 2048 96 44 0 chr20 3900838 3901131 -62766874 - AluSp SINE Alu -7 306 1 905 105 0 0 chr20 3901158 3901282 -62766723 - AluSq/x SINE Alu -188 124 1 300 265 68 77 chr20 3901287 3901344 -62766661 - L1MC4a LINE L1 -1927 5881 5825 2121 100 0 13 chr20 3901344 3901643 -62766362 - AluSg SINE Alu -15 295 1 300 265 68 77 chr20 3901643 3901702 -62766303 - L1MC4a LINE L1 -1983 5825 5766 222 62 0 0 chr20 3902047 3902079 -62765926 + (T)n Simple_repeat Simple_repeat 1 32 0 2227 95 0 3 chr20 3903054 3903350 -62764655 + AluSg SINE Alu 1 295 -15 2146 96 7 0 chr20 3903361 3903654 -62764351 + AluSp SINE Alu 1 295 -18 1918 112 67 0 chr20 3904421 3904706 -62763299 + AluSg SINE Alu 1 304 -6 3828 187 88 60 chr20 3904733 3905100 -62762905 - L1MB7 LINE L1 0 6184 5829 1951 98 35 3 chr20 3905100 3905386 -62762619 - AluSp SINE Alu -18 295 1 3828 187 88 60 chr20 3905386 3905542 -62762463 - L1MB7 LINE L1 -355 5829 5679 2238 84 0 3 chr20 3905542 3905840 -62762165 - AluY SINE Alu -14 297 1 3828 187 88 60 chr20 3905840 3906071 -62761934 - L1MB7 LINE L1 -505 5679 5456 1305 186 61 7 chr20 3906071 3906350 -62761655 - AluJo SINE Alu -18 294 1 1730 147 3 36 chr20 3906355 3906661 -62761344 - AluSx SINE Alu -16 296 1 3828 187 88 60 chr20 3906661 3907047 -62760958 - L1MB7 LINE L1 -731 5453 5079 2391 64 3 0 chr20 3907047 3907344 -62760661 - AluSc SINE Alu -8 301 4 3828 187 88 60 chr20 3907344 3908021 -62759984 - L1MB7 LINE L1 -1105 5079 4308 22 35 0 0 chr20 3909401 3909430 -62758575 + AT_rich Low_complexity Low_complexity 1 29 0 255 328 54 32 chr20 3909742 3909928 -62758077 - L1MC4a LINE L1 -408 5713 5524 1831 149 3 23 chr20 3910652 3910960 -62757045 - AluSx SINE Alu -7 305 4 1994 104 19 35 chr20 3911981 3912297 -62755708 + AluSx SINE Alu 1 311 -1 2220 91 7 0 chr20 3912316 3912613 -62755392 + AluSp SINE Alu 1 299 -14 1734 63 5 0 chr20 3912804 3913026 -62754979 - L1PA5 LINE L1 -1 6153 5931 23 0 0 0 chr20 3913265 3913288 -62754717 + AT_rich Low_complexity Low_complexity 1 23 0 1829 137 13 7 chr20 3913461 3913760 -62754245 - AluSx SINE Alu -11 301 1 352 254 71 40 chr20 3916737 3916863 -62751142 - MIR SINE MIR -110 152 23 1963 109 11 0 chr20 3917001 3917285 -62750720 - AluSx SINE Alu -25 287 1 203 305 49 12 chr20 3917294 3917376 -62750629 + L2 LINE L2 1881 1965 -1349 2056 89 16 20 chr20 3918409 3918713 -62749292 + AluSx SINE Alu 1 303 -9 2332 66 30 0 chr20 3920227 3920529 -62747476 + AluY SINE Alu 1 311 0 2165 97 13 26 chr20 3920596 3920906 -62747099 - AluSx SINE Alu -6 306 1 1132 149 47 42 chr20 3920944 3921159 -62746846 + AluJo SINE Alu 81 296 -16 216 0 0 0 chr20 3924815 3924839 -62743166 + (T)n Simple_repeat Simple_repeat 1 24 0 209 224 20 0 chr20 3924846 3924895 -62743110 + GA-rich Low_complexity Low_complexity 2 51 0 321 286 53 30 chr20 3927510 3927643 -62740362 - MIR3 SINE MIR -32 176 41 224 260 26 52 chr20 3927716 3927793 -62740212 + L2 LINE L2 2565 2639 -675 220 277 92 0 chr20 3928006 3928125 -62739880 + MIR SINE MIR 17 146 -62 213 201 78 0 chr20 3928341 3928399 -62739606 + MIR SINE MIR 107 150 -58 2279 97 0 7 chr20 3928590 3928888 -62739117 - AluSc SINE Alu -13 296 1 4325 172 66 27 chr20 3929185 3930077 -62737928 - L1MB7 LINE L1 -19 6165 5240 434 214 19 10 chr20 3930074 3930177 -62737828 + L1M4 LINE L1 4844 4947 -1199 * 479 133 133 9 chr20 3930230 3930343 -62737662 + L1M4 LINE L1 5108 5234 -912 3710 201 42 38 chr20 3930348 3930493 -62737512 - L1M4 LINE L1 -837 5309 5166 1739 125 16 61 chr20 3930493 3930804 -62737201 - AluJo SINE Alu -15 297 1 3710 201 42 38 chr20 3930804 3930916 -62737089 - L1M4 LINE L1 -980 5166 5056 800 181 8 0 chr20 3930916 3931043 -62736962 - FLAM_A SINE Alu -5 128 1 3710 201 42 38 chr20 3931043 3931711 -62736294 - L1M4 LINE L1 -1090 5056 4379 1927 161 3 0 chr20 3931717 3932009 -62735996 - AluSp SINE Alu -20 293 1 3133 163 76 171 chr20 3932010 3932778 -62735227 + L1MDa LINE L1 1308 2147 -4393 1197 189 26 21 chr20 3932778 3933011 -62734994 - AluJb SINE Alu -15 297 64 3133 163 76 171 chr20 3933011 3933544 -62734461 + L1MDa LINE L1 2147 2729 -3811 2344 109 3 0 chr20 3933544 3933855 -62734150 + AluSx SINE Alu 1 312 0 3133 163 76 171 chr20 3933855 3933925 -62734080 + L1MDa LINE L1 2729 2804 -3736 1926 169 0 0 chr20 3933925 3934220 -62733785 - AluJo SINE Alu -17 295 1 3133 163 76 171 chr20 3934220 3934236 -62733769 + L1MDa LINE L1 2804 2820 -3720 2479 52 0 3 chr20 3934236 3934524 -62733481 - AluY SINE Alu -24 287 1 3133 163 76 171 chr20 3934524 3934570 -62733435 + L1MDa LINE L1 2820 2793 -3747 2153 118 3 0 chr20 3934570 3934866 -62733139 - AluSq SINE Alu -15 298 2 3133 163 76 171 chr20 3934866 3934948 -62733057 + L1MDa LINE L1 2792 2880 -3660 1490 240 12 30 chr20 3934937 3935341 -62732664 + L1M4 LINE L1 4497 4893 -1253 * 2374 102 0 0 chr20 3935679 3935982 -62732023 + AluSx SINE Alu 1 303 -9 21 57 0 0 chr20 3936103 3936138 -62731867 + AT_rich Low_complexity Low_complexity 1 35 0 2389 97 0 0 chr20 3937184 3937484 -62730521 + AluSq SINE Alu 1 300 -13 1786 134 48 4 chr20 3937936 3938232 -62729773 + AluJb SINE Alu 1 308 0 1276 100 45 68 chr20 3938244 3938464 -62729541 + AluJb SINE Alu 87 301 -11 2247 88 3 14 chr20 3938662 3938959 -62729046 + AluSc SINE Alu 1 294 -15 2567 59 3 0 chr20 3939516 3939823 -62728182 + AluSp SINE Alu 1 308 -5 2100 225 50 11 chr20 3940316 3940837 -62727168 - L1ME3 LINE L1 -6 6156 5616 2198 115 0 0 chr20 3940849 3941144 -62726861 + AluSx SINE Alu 1 295 -17 2019 130 10 3 chr20 3941155 3941448 -62726557 + AluJb SINE Alu 1 295 -17 1098 253 42 31 chr20 3941523 3941907 -62726098 - L1ME3 LINE L1 -979 5167 4780 1700 229 22 22 chr20 3941954 3942360 -62725645 + MLT1C LTR MaLR 59 464 -3 2256 169 200 142 chr20 3942394 3942707 -62725298 - L1MC4a LINE L1 -1 7807 7514 2397 80 0 7 chr20 3942707 3943008 -62724997 - AluY SINE Alu -12 299 1 2256 169 200 142 chr20 3943008 3943762 -62724243 - L1MC4a LINE L1 -294 7514 6678 2009 247 184 55 chr20 3943762 3944848 -62723157 - L1ME3 LINE L1 -1369 4777 3552 2279 83 7 7 chr20 3944902 3945203 -62722802 - AluY SINE Alu -10 301 1 1826 109 4 0 chr20 3945212 3945459 -62722546 - AluSg SINE Alu -8 302 55 2351 98 3 0 chr20 3945511 3945807 -62722198 - AluSx SINE Alu -15 297 1 4391 169 56 12 chr20 3945846 3946374 -62721631 - L1MB5 LINE L1 -19 6155 5566 2191 109 17 3 chr20 3946374 3946668 -62721337 + AluSg SINE Alu 1 298 -12 4391 169 56 12 chr20 3946668 3947094 -62720911 - L1MB5 LINE L1 -608 5566 5160 4103 209 24 15 chr20 3947091 3948017 -62719988 - L1MB5 LINE L1 -1201 4945 4012 * 902 210 56 80 chr20 3948040 3948502 -62719503 - L1ME3 LINE L1 -2705 3441 2991 1695 153 55 49 chr20 3948630 3948762 -62719243 + AluJb SINE Alu 1 131 -181 2261 97 7 17 chr20 3948762 3949062 -62718943 + AluSx SINE Alu 1 297 -15 1695 153 55 49 chr20 3949062 3949237 -62718768 + AluJb SINE Alu 131 310 -2 424 329 159 56 chr20 3949589 3950404 -62717601 + L2 LINE L2 1167 2167 -1147 2211 114 3 0 chr20 3950404 3950693 -62717312 - AluSx SINE Alu -22 290 1 424 329 159 56 chr20 3950693 3951176 -62716829 + L2 LINE L2 2167 2599 -715 676 136 10 0 chr20 3951237 3951340 -62716665 - L1MA4 LINE L1 -13 6287 6184 625 208 154 41 chr20 3951351 3951572 -62716433 - HAL1 LINE L1 -1 2506 2261 397 244 33 11 chr20 3951578 3951668 -62716337 - L2 LINE L2 0 3313 3222 2229 90 0 0 chr20 3952139 3952442 -62715563 + AluSc SINE Alu 1 303 0 1905 104 86 7 chr20 3952565 3952844 -62715161 - AluSx SINE Alu -11 301 1 1740 186 17 0 chr20 3952871 3953172 -62714833 + AluJo SINE Alu 1 306 -6 21 57 0 0 chr20 3953445 3953480 -62714525 + AT_rich Low_complexity Low_complexity 1 35 0 1663 180 7 11 chr20 3953822 3954129 -62713876 + AluJb SINE Alu 1 306 0 2046 108 42 0 chr20 3954464 3954750 -62713255 - AluSq SINE Alu -15 298 1 2270 115 0 0 chr20 3954940 3955244 -62712761 - AluSx SINE Alu -8 304 1 290 211 53 66 chr20 3955915 3955991 -62712014 - L2 LINE L2 0 3313 3239 1839 154 27 14 chr20 3956276 3956569 -62711436 - AluJb SINE Alu -15 297 1 194 286 158 45 chr20 3956572 3956705 -62711300 - MIR SINE MIR -113 149 2 2202 125 3 3 chr20 3957603 3957914 -62710091 + AluSx SINE Alu 1 311 -1 260 283 44 96 chr20 3957967 3958192 -62709813 + MIR3 SINE MIR 2 217 -45 342 0 0 0 chr20 3958221 3958259 -62709746 + (TG)n Simple_repeat Simple_repeat 2 39 0 2172 96 51 0 chr20 3959466 3959758 -62708247 + AluSc SINE Alu 2 308 -1 2139 96 17 3 chr20 3959775 3960066 -62707939 + AluSg SINE Alu 1 295 -15 1537 197 7 30 chr20 3960078 3960378 -62707627 + AluJo SINE Alu 1 293 -19 727 248 67 50 chr20 3960722 3960960 -62707045 + MIR SINE MIR 21 262 0 9595 206 101 77 chr20 3961026 3961525 -62706480 + L1MD1 LINE L1 14 500 -6040 1720 77 0 0 chr20 3961525 3961733 -62706272 - AluSc SINE Alu -14 295 88 9595 206 101 77 chr20 3961733 3962515 -62705490 + L1MD1 LINE L1 500 1262 -5278 1425 112 0 0 chr20 3962515 3962702 -62705303 + AluSq SINE Alu 1 187 -126 9595 206 101 77 chr20 3962702 3964370 -62703635 + L1MD1 LINE L1 1262 2889 -3651 2183 100 0 20 chr20 3964370 3964671 -62703334 + AluSx SINE Alu 1 295 -17 2260 117 0 0 chr20 3964672 3964981 -62703024 + AluSq SINE Alu 1 309 -4 9595 206 101 77 chr20 3964981 3967306 -62700699 + L1MD1 LINE L1 2888 5699 -841 813 177 92 61 chr20 3967309 3967622 -62700383 + MLT1C LTR MaLR 2 354 -113 1357 158 0 0 chr20 3967636 3967838 -62700167 - AluSx SINE Alu -110 202 1 694 138 0 18 chr20 3967839 3967948 -62700057 + MLT1C LTR MaLR 354 460 -7 3580 160 21 5 chr20 3967948 3968555 -62699450 + L1MD1 LINE L1 5702 6318 -318 1101 177 25 0 chr20 3968567 3968765 -62699240 + L1MD1 LINE L1 6434 6636 0 360 237 0 92 chr20 3968768 3968899 -62699106 + HAL1 LINE L1 1534 1652 -855 2483 57 3 0 chr20 3969335 3969633 -62698372 + AluY SINE Alu 1 299 -12 553 200 54 8 chr20 3969687 3969817 -62698188 + L1MA4 LINE L1 6010 6145 -155 1941 99 122 0 chr20 3969824 3970087 -62697918 - AluSg SINE Alu -5 295 1 896 128 89 6 chr20 3970108 3970288 -62697717 + L1MA4 LINE L1 6102 6296 -4 413 260 87 43 chr20 3970300 3970531 -62697474 + L1M4 LINE L1 2200 2440 -3706 2096 95 50 0 chr20 3970575 3970858 -62697147 + AluSx SINE Alu 1 297 -15 24 0 0 0 chr20 3970866 3970890 -62697115 + AT_rich Low_complexity Low_complexity 1 24 0 2123 107 3 17 chr20 3971140 3971430 -62696575 + AluSq SINE Alu 1 286 -27 397 167 0 0 chr20 3971370 3971430 -62696575 + AluSp/q SINE Alu 227 315 0 222 0 35 0 chr20 3971430 3971459 -62696546 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 343 256 79 24 chr20 3971629 3971793 -62696212 + L1M4 LINE L1 3027 3199 -2947 446 198 0 0 chr20 3972025 3972106 -62695899 - Tigger7 DNA MER2_type 0 2587 2507 1312 189 67 20 chr20 3972113 3972367 -62695638 - Tigger7 DNA MER2_type -284 266 1 647 243 92 23 chr20 3972463 3972681 -62695324 + Charlie8 DNA MER1_type 1 233 -2184 225 284 169 0 chr20 3973079 3973227 -62694778 - L1P LINE L1 -1092 5054 4882 1365 98 0 11 chr20 3973256 3973440 -62694565 - AluSc SINE Alu -10 299 118 1636 163 42 0 chr20 3973588 3973852 -62694153 + AluJb SINE Alu 1 275 -37 288 0 0 0 chr20 3973855 3973887 -62694118 + (TC)n Simple_repeat Simple_repeat 1 32 0 376 286 63 35 chr20 3973896 3973968 -62694037 - L1M4 LINE L1 -1524 4622 4554 1327 182 81 86 chr20 3973968 3974047 -62693958 + MSTD LTR MaLR 1 79 -317 2380 86 0 10 chr20 3974047 3974348 -62693657 + AluSg SINE Alu 1 298 -12 1614 188 3 24 chr20 3974356 3974654 -62693351 + AluJb SINE Alu 1 292 -20 1327 182 81 86 chr20 3974654 3974960 -62693045 + MSTD LTR MaLR 86 393 -3 376 286 63 35 chr20 3974960 3975205 -62692800 - L1M4 LINE L1 -1592 4554 4296 2478 94 0 0 chr20 3975410 3975717 -62692288 + AluSx SINE Alu 1 307 -5 1399 183 102 25 chr20 3975730 3976014 -62691991 + AluJo SINE Alu 3 308 -4 183 42 0 0 chr20 3976792 3976816 -62691189 + (CAA)n Simple_repeat Simple_repeat 2 25 0 618 220 0 0 chr20 3977017 3977135 -62690870 - FLAM_A SINE Alu -11 122 5 1618 74 34 176 chr20 3977451 3977804 -62690201 - AluSp SINE Alu 0 303 1 313 160 0 27 chr20 3977956 3978031 -62689974 + CT-rich Low_complexity Low_complexity 4 76 0 1786 146 4 18 chr20 3978032 3978307 -62689698 - AluJb SINE Alu -40 272 2 1838 113 0 16 chr20 3978401 3978657 -62689348 - AluSc SINE Alu -14 295 44 821 193 12 36 chr20 3978657 3978823 -62689182 - FRAM SINE Alu -14 162 1 27 0 0 0 chr20 3979756 3979783 -62688222 + AT_rich Low_complexity Low_complexity 1 27 0 1841 190 0 3 chr20 3979792 3980102 -62687903 + AluJb SINE Alu 1 309 -3 1890 166 3 0 chr20 3980209 3980510 -62687495 - AluJo SINE Alu -10 302 1 226 250 81 32 chr20 3980720 3980844 -62687161 + L1MC4a LINE L1 4474 4603 -1543 2655 55 0 0 chr20 3980961 3981268 -62686737 + AluY SINE Alu 1 307 -4 1280 272 42 21 chr20 3981326 3981712 -62686293 + MLT1I LTR MaLR 16 409 0 34 65 0 0 chr20 3981894 3981956 -62686049 + AT_rich Low_complexity Low_complexity 1 62 0 843 248 113 72 chr20 3982031 3982327 -62685678 + L1MC4a LINE L1 5509 5828 -1980 1391 191 3 66 chr20 3982327 3982646 -62685359 + AluJo SINE Alu 1 299 -13 843 248 113 72 chr20 3982646 3982764 -62685241 + L1MC4a LINE L1 5828 5940 -1868 27 0 0 0 chr20 3982968 3982995 -62685010 + AT_rich Low_complexity Low_complexity 1 27 0 2183 117 0 3 chr20 3982999 3983298 -62684707 - AluY SINE Alu -8 303 6 27 29 0 0 chr20 3983528 3983562 -62684443 + AT_rich Low_complexity Low_complexity 1 34 0 285 29 0 0 chr20 3983679 3983713 -62684292 + (CA)n Simple_repeat Simple_repeat 2 35 0 393 274 47 1 chr20 3984906 3985046 -62682959 - MIR SINE MIR -60 148 46 2229 110 3 0 chr20 3985046 3985338 -62682667 - AluSx SINE Alu -19 293 1 1301 140 144 0 chr20 3985580 3985837 -62682168 - L1MD3 LINE L1 -8 7987 7694 21 0 0 0 chr20 3988099 3988120 -62679885 + AT_rich Low_complexity Low_complexity 1 21 0 753 192 155 118 chr20 3988277 3988690 -62679315 + MLT1J LTR MaLR 1 436 -75 2408 60 3 35 chr20 3988690 3989007 -62678998 + AluY SINE Alu 1 307 -4 753 192 155 118 chr20 3989007 3989083 -62678922 + MLT1J LTR MaLR 436 508 -3 1656 201 3 0 chr20 3989182 3989475 -62678530 - AluJb SINE Alu -16 296 3 180 250 0 0 chr20 3989674 3989718 -62678287 - MIR SINE MIR -117 145 102 2316 85 0 32 chr20 3989910 3990044 -62677961 + AluSg SINE Alu 1 138 -172 2450 99 0 0 chr20 3990044 3990356 -62677649 + AluSx SINE Alu 1 312 0 2316 85 0 32 chr20 3990356 3990537 -62677468 + AluSg SINE Alu 138 306 -4 2147 136 3 0 chr20 3990550 3990860 -62677145 + AluSx SINE Alu 1 311 -1 2307 99 3 3 chr20 3991224 3991537 -62676468 + AluSp SINE Alu 1 313 0 1401 196 32 42 chr20 3991587 3991945 -62676060 + L1MB8 LINE L1 5824 6178 0 2278 105 0 3 chr20 3991993 3992288 -62675717 + AluSq SINE Alu 1 294 -19 2243 111 3 3 chr20 3992736 3993042 -62674963 + AluSx SINE Alu 1 306 -6 1594 170 16 45 chr20 3993407 3993719 -62674286 + AluJo SINE Alu 1 303 -9 928 120 0 0 chr20 3993722 3993855 -62674150 + AluSg SINE Alu 1 133 -177 2414 57 0 3 chr20 3993855 3994177 -62673828 + AluY SINE Alu 1 321 0 21 36 0 0 chr20 3994525 3994553 -62673452 + AT_rich Low_complexity Low_complexity 1 28 0 2180 110 10 7 chr20 3994711 3995020 -62672985 - AluSg SINE Alu 0 310 1 2395 100 0 6 chr20 3995385 3995696 -62672309 - AluSx SINE Alu -3 309 1 883 210 95 81 chr20 3996165 3996593 -62671412 + MLT1D LTR MaLR 6 503 -2 185 301 240 0 chr20 3996852 3996998 -62671007 + MIR SINE MIR 28 208 -54 2106 122 28 0 chr20 3997846 3998134 -62669871 + AluSx SINE Alu 1 296 -16 1691 148 10 56 chr20 3999374 3999679 -62668326 + AluJb SINE Alu 1 291 -21 508 259 73 19 chr20 3999819 4000024 -62667981 - MIR SINE MIR 0 262 47 248 58 145 87 chr20 4000024 4000093 -62667912 + LTR66 LTR ERVL 365 437 -173 619 32 38 70 chr20 4000122 4000308 -62667697 + (TA)n Simple_repeat Simple_repeat 1 180 0 2333 83 3 3 chr20 4000308 4000596 -62667409 - AluSg1 SINE Alu -21 288 1 372 313 74 0 chr20 4000799 4000962 -62667043 - L2 LINE L2 -19 3294 3120 483 302 108 48 chr20 4001009 4001509 -62666496 - L2 LINE L2 -1571 1743 1214 23 0 0 0 chr20 4001593 4001616 -62666389 + AT_rich Low_complexity Low_complexity 1 23 0 1111 107 0 0 chr20 4001650 4001800 -62666205 + AluSg/x SINE Alu 129 278 -32 396 0 0 0 chr20 4001800 4001844 -62666161 + (CAAA)n Simple_repeat Simple_repeat 4 47 0 2226 113 0 0 chr20 4001844 4002128 -62665877 + AluSg SINE Alu 1 284 -26 371 154 125 140 chr20 4002659 4002795 -62665210 - MLT1G1 LTR MaLR -461 134 1 2795 206 137 48 chr20 4002806 4003739 -62664266 + HAL1 LINE L1 1371 2386 -121 2118 122 0 28 chr20 4003882 4004203 -62663802 + AluSx SINE Alu 1 312 0 21 57 0 0 chr20 4004820 4004855 -62663150 + AT_rich Low_complexity Low_complexity 1 35 0 2386 61 0 14 chr20 4005241 4005536 -62662469 - AluSq SINE Alu -22 291 1 342 0 0 0 chr20 4006491 4006529 -62661476 + (CA)n Simple_repeat Simple_repeat 1 38 0 25 31 0 0 chr20 4007140 4007172 -62660833 + GC_rich Low_complexity Low_complexity 1 32 0 37 52 0 0 chr20 4007308 4007366 -62660639 + GC_rich Low_complexity Low_complexity 1 58 0 2555 46 0 16 chr20 4007544 4007848 -62660157 + AluY SINE Alu 1 299 -12 2304 95 3 0 chr20 4007930 4008224 -62659781 + AluSx SINE Alu 1 295 -17 1626 147 35 22 chr20 4009479 4009793 -62658212 + L1MC1 LINE L1 6016 6333 0 2440 88 3 0 chr20 4010877 4011183 -62656822 - AluSp SINE Alu -6 307 1 186 156 0 0 chr20 4011361 4011393 -62656612 + L2 LINE L2 3238 3269 -3 2255 94 7 0 chr20 4011772 4012059 -62655946 - AluSg SINE Alu -12 298 10 862 314 24 14 chr20 4012411 4012701 -62655304 - LTR16C LTR ERVL -2 489 197 2446 82 0 3 chr20 4012702 4013007 -62654998 - AluSp SINE Alu -9 304 1 195 42 0 0 chr20 4013008 4013032 -62654973 + (TTTTC)n Simple_repeat Simple_repeat 4 27 0 1687 141 0 12 chr20 4013032 4013281 -62654724 - AluSx SINE Alu -30 282 37 2243 255 98 45 chr20 4014085 4014890 -62653115 + HAL1 LINE L1 4 851 -1656 1495 237 119 12 chr20 4014890 4015300 -62652705 - LTR16A1 LTR ERVL 0 457 4 267 234 52 0 chr20 4015300 4015377 -62652628 + HAL1 LINE L1 834 914 -1593 2356 215 127 34 chr20 4016335 4016450 -62651555 + HAL1 LINE L1 937 1040 -1467 219 69 0 0 chr20 4016450 4016479 -62651526 + (CA)n Simple_repeat Simple_repeat 2 30 0 2356 215 127 34 chr20 4016479 4017168 -62650837 + HAL1 LINE L1 1040 1816 -691 246 265 22 81 chr20 4017354 4017490 -62650515 + MIR3 SINE MIR 44 171 -37 1065 238 22 11 chr20 4017527 4017796 -62650209 - L1ME1 LINE L1 -50 6116 5845 1832 246 47 11 chr20 4017817 4018288 -62649717 - LTR16C LTR ERVL -2 489 2 1904 128 54 10 chr20 4018685 4018982 -62649023 - AluJb SINE Alu -2 310 1 21 0 0 0 chr20 4019041 4019062 -62648943 + AT_rich Low_complexity Low_complexity 1 21 0 2371 92 0 0 chr20 4019063 4019355 -62648650 - AluSx SINE Alu -19 293 2 433 143 78 0 chr20 4019366 4019443 -62648562 - L1PB4 LINE L1 -8 6148 6066 262 253 11 11 chr20 4019868 4019963 -62648042 + CT-rich Low_complexity Low_complexity 3 97 0 685 164 11 28 chr20 4019975 4020152 -62647853 + CT-rich Low_complexity Low_complexity 4 177 0 1935 115 0 19 chr20 4020167 4020436 -62647569 - AluSq SINE Alu -49 264 1 5825 199 37 33 chr20 4020597 4020918 -62647087 - L1MD2 LINE L1 0 6359 6041 2124 105 0 3 chr20 4020918 4021233 -62646772 - AluSg SINE Alu 0 314 1 5825 199 37 33 chr20 4021233 4022428 -62645577 - L1MD2 LINE L1 -318 6041 4818 1811 172 3 16 chr20 4022428 4022731 -62645274 + AluJo SINE Alu 3 301 -11 5825 199 37 33 chr20 4022731 4023613 -62644392 - L1MD2 LINE L1 -1541 4818 3941 6226 86 28 41 chr20 4023615 4025851 -62642154 + SVA Other Other 33 1386 0 3171 134 49 28 chr20 4025852 4026381 -62641624 - LTR5 LTR ERVK -94 875 336 2244 117 6 54 chr20 4026381 4026733 -62641272 - SVA Other Other -114 1272 938 1123 127 0 0 chr20 4026736 4026893 -62641112 + AluSq SINE Alu 144 300 -13 288 0 0 0 chr20 4027430 4027462 -62640543 + (TG)n Simple_repeat Simple_repeat 2 33 0 234 0 0 0 chr20 4027550 4027576 -62640429 + (A)n Simple_repeat Simple_repeat 1 26 0 298 167 0 0 chr20 4027586 4027640 -62640365 + U6 snRNA snRNA 1 54 -53 350 209 0 11 chr20 4027715 4027806 -62640199 - L1MD2 LINE L1 -2196 3950 3861 290 69 0 103 chr20 4027807 4027865 -62640140 - Tigger7 DNA MER2_type -199 2292 2241 1035 135 29 92 chr20 4027867 4028074 -62639931 + AluJb SINE Alu 1 194 -118 460 221 159 0 chr20 4028421 4028534 -62639471 - MIR SINE MIR -11 251 121 325 204 65 28 chr20 4028540 4028648 -62639357 + L1MD3 LINE L1 7092 7203 -792 722 200 0 36 chr20 4028675 4028815 -62639190 + FLAM_C SINE Alu 2 136 -7 24 0 0 0 chr20 4028815 4028839 -62639166 + AT_rich Low_complexity Low_complexity 1 24 0 655 226 145 0 chr20 4028848 4029034 -62638971 + L1MD3 LINE L1 7405 7617 -378 1918 90 56 8 chr20 4029299 4029567 -62638438 - AluSx SINE Alu -11 301 21 604 213 8 8 chr20 4029567 4029689 -62638316 - MLT1D LTR MaLR -383 122 1 228 167 0 0 chr20 4029847 4029895 -62638110 + (TG)n Simple_repeat Simple_repeat 2 49 0 209 213 0 21 chr20 4030695 4030742 -62637263 + CT-rich Low_complexity Low_complexity 3 48 0 427 279 22 0 chr20 4030898 4031034 -62636971 - LTR16A1 LTR ERVL -318 139 1 740 268 111 34 chr20 4031034 4031407 -62636598 + L1ME3A LINE L1 5502 5913 -257 2173 109 3 0 chr20 4031407 4031721 -62636284 - AluSx SINE Alu 0 315 1 740 268 111 34 chr20 4031721 4031761 -62636244 + L1ME3A LINE L1 5913 5948 -222 336 228 8 16 chr20 4031769 4031896 -62636109 + (TA)n Simple_repeat Simple_repeat 1 126 0 569 248 90 0 chr20 4031933 4032066 -62635939 + MIR SINE MIR 2 146 -116 339 214 54 74 chr20 4032074 4032376 -62635629 - MLT1H LTR MaLR 0 578 151 297 147 227 13 chr20 4032457 4032532 -62635473 + MIR SINE MIR 151 241 -21 316 297 88 11 chr20 4032747 4032838 -62635167 + L2 LINE L2 3149 3246 -26 1479 132 106 0 chr20 4033264 4033499 -62634506 + AluJb SINE Alu 1 260 -52 408 329 4 0 chr20 4033887 4034015 -62633990 + MIR SINE MIR 28 159 -49 1777 181 70 79 chr20 4034179 4034331 -62633674 - MLT1C LTR MaLR 0 467 315 2289 119 0 13 chr20 4034331 4034641 -62633364 - AluSx SINE Alu -6 306 1 1777 181 70 79 chr20 4034641 4034959 -62633046 - MLT1C LTR MaLR -152 315 1 943 226 74 36 chr20 4035021 4035358 -62632647 + L1ME3 LINE L1 5623 5972 -190 23 0 0 0 chr20 4035421 4035444 -62632561 + AT_rich Low_complexity Low_complexity 1 23 0 227 298 193 0 chr20 4035702 4035816 -62632189 + MIR SINE MIR 48 183 -79 2012 172 16 54 chr20 4036765 4037189 -62630816 - MLT2D LTR ERVL 0 414 7 1117 251 67 51 chr20 4037354 4037804 -62630201 + LTR16A1 LTR ERVL 1 457 0 378 347 41 14 chr20 4038769 4038916 -62629089 + MIR SINE MIR 28 178 -84 272 270 0 0 chr20 4039142 4039205 -62628800 - MER117 DNA MER1_type -134 63 1 547 184 9 9 chr20 4039465 4039579 -62628426 - LTR16C LTR ERVL -15 476 363 501 294 100 12 chr20 4039578 4039738 -62628267 - LTR16C LTR ERVL -246 245 72 * 1084 184 0 11 chr20 4040587 4040772 -62627233 - AluJo SINE Alu -9 303 121 851 206 16 0 chr20 4040850 4041034 -62626971 - L1ME2 LINE L1 -302 5862 5676 2566 59 0 3 chr20 4041047 4041350 -62626655 - AluY SINE Alu -9 302 1 1383 242 170 52 chr20 4041476 4041509 -62626496 + L2 LINE L2 2342 2370 -943 2863 65 11 0 chr20 4041509 4041860 -62626145 - THE1A LTR MaLR 0 355 1 1383 242 170 52 chr20 4041860 4042660 -62625345 + L2 LINE L2 2370 3289 -24 2506 142 33 26 chr20 4042811 4042861 -62625144 + MSTC LTR MaLR 1 49 -379 2239 97 0 0 chr20 4042861 4043193 -62624812 + AluSc SINE Alu 1 332 0 2506 142 33 26 chr20 4043193 4043561 -62624444 + MSTC LTR MaLR 49 425 -3 663 231 14 0 chr20 4044774 4044917 -62623088 - Charlie4a DNA MER1_type -10 498 354 3787 143 40 5 chr20 4044926 4045575 -62622430 + L1MA6 LINE L1 5616 6287 -13 434 233 26 0 chr20 4045575 4045691 -62622314 + L1MA8 LINE L1 6173 6291 0 1079 135 18 127 chr20 4045696 4045758 -62622247 + AluJb SINE Alu 84 151 -161 2358 109 7 0 chr20 4045758 4046062 -62621943 + AluSp SINE Alu 1 306 -7 1079 135 18 127 chr20 4046062 4046228 -62621777 + AluJb SINE Alu 151 287 -25 1155 188 48 27 chr20 4046241 4046299 -62621706 - Charlie4a DNA MER1_type -1621 340 285 1684 197 63 21 chr20 4046299 4046466 -62621539 + MSTD LTR MaLR 1 160 -236 2059 142 0 26 chr20 4046466 4046576 -62621429 + AluSx SINE Alu 1 112 -200 2521 67 3 0 chr20 4046576 4046873 -62621132 - AluY SINE Alu -13 298 1 2059 142 0 26 chr20 4046873 4047072 -62620933 + AluSx SINE Alu 112 302 -10 1684 197 63 21 chr20 4047072 4047284 -62620721 + MSTD LTR MaLR 160 396 0 1155 188 48 27 chr20 4047284 4047518 -62620487 - Charlie4a DNA MER1_type -1676 285 42 2320 123 0 0 chr20 4047542 4047851 -62620154 + AluSx SINE Alu 1 309 -3 232 64 0 128 chr20 4047980 4048027 -62619978 - Alu SINE Alu -6 295 255 2345 103 0 3 chr20 4048282 4048594 -62619411 - AluY SINE Alu 0 311 1 252 299 14 75 chr20 4048647 4048794 -62619211 - L1MC4a LINE L1 -1874 5934 5797 1152 180 29 130 chr20 4049676 4049874 -62618131 - L1ME3A LINE L1 -28 6142 6012 1672 135 40 72 chr20 4049874 4050178 -62617827 - AluJo SINE Alu -18 294 1 1152 180 29 130 chr20 4050178 4050424 -62617581 - L1ME3A LINE L1 -158 6012 5743 29 0 0 0 chr20 4050637 4050666 -62617339 + AT_rich Low_complexity Low_complexity 1 29 0 2694 26 0 7 chr20 4050761 4051065 -62616940 + AluY SINE Alu 1 302 -9 23 33 0 0 chr20 4051071 4051101 -62616904 + AT_rich Low_complexity Low_complexity 1 30 0 288 254 0 0 chr20 4051953 4052012 -62615993 + MIR SINE MIR 72 130 -78 305 340 0 31 chr20 4052057 4052216 -62615789 - LTR16C LTR ERVL -24 467 314 1392 181 96 67 chr20 4053087 4053394 -62614611 + Charlie4a DNA MER1_type 2 328 -1633 1635 128 121 11 chr20 4053394 4053659 -62614346 - AluSg1 SINE Alu -15 294 1 1392 181 96 67 chr20 4053659 4053798 -62614207 + Charlie4a DNA MER1_type 328 461 -47 295 242 0 0 chr20 4053854 4053916 -62614089 - MER117 DNA MER1_type -43 154 93 1610 194 78 99 chr20 4054407 4054944 -62613061 - MLT1H LTR MaLR 0 549 24 1159 168 45 27 chr20 4054951 4055171 -62612834 - AluJo SINE Alu -19 293 70 249 250 225 17 chr20 4056733 4056853 -62611152 + MER5A DNA MER1_type 43 187 -2 * 541 195 0 0 chr20 4056760 4056864 -62611141 - MER5A DNA MER1_type -80 109 6 24 0 0 0 chr20 4057258 4057282 -62610723 + AT_rich Low_complexity Low_complexity 1 24 0 778 230 221 9 chr20 4057304 4057621 -62610384 - L1MC4a LINE L1 -1988 5820 5437 471 272 154 12 chr20 4057860 4058022 -62609983 - MER5A DNA MER1_type 0 189 5 811 193 57 17 chr20 4058027 4058203 -62609802 - MER58A DNA MER1_type 0 224 42 478 265 158 24 chr20 4058332 4058585 -62609420 - LTR33A LTR ERVL -2 521 235 444 256 0 17 chr20 4058978 4059095 -62608910 - MER58 DNA MER1_type -96 119 5 1472 234 151 19 chr20 4059792 4060224 -62607781 - LTR16C LTR ERVL 0 491 3 292 266 106 9 chr20 4060231 4060344 -62607661 - MIR SINE MIR -110 152 29 1527 159 37 37 chr20 4061007 4061303 -62606702 - AluJo SINE Alu -16 296 1 1812 187 113 25 chr20 4061621 4061714 -62606291 + MLT1H LTR MaLR 39 122 -427 1959 176 26 57 chr20 4061714 4062139 -62605866 - MLT2D LTR ERVL 0 414 3 1812 187 113 25 chr20 4062139 4062515 -62605490 + MLT1H LTR MaLR 122 549 0 301 345 21 35 chr20 4062858 4062980 -62605025 + MIR SINE MIR 6 121 -141 812 170 113 0 chr20 4062980 4063139 -62604866 - MER69A DNA AcHobo 0 177 1 301 345 21 35 chr20 4063139 4063219 -62604786 + MIR SINE MIR 121 201 -61 903 239 39 8 chr20 4063508 4063763 -62604242 - LTR16A1 LTR ERVL -14 443 181 271 257 14 0 chr20 4063775 4063845 -62604160 - LTR16A1 LTR ERVL -386 71 1 360 0 0 0 chr20 4064583 4064623 -62603382 + (CA)n Simple_repeat Simple_repeat 2 41 0 24 0 0 0 chr20 4065453 4065477 -62602528 + AT_rich Low_complexity Low_complexity 1 24 0 1676 132 4 24 chr20 4065589 4065840 -62602165 - AluJo SINE Alu -36 276 31 536 301 16 43 chr20 4066519 4066891 -62601114 + L2 LINE L2 2248 2676 -638 1881 209 160 6 chr20 4067385 4067583 -62600422 - L1MD2 LINE L1 -3 6356 6159 2234 213 92 16 chr20 4067583 4068493 -62599512 - L1MC4 LINE L1 -86 6482 5488 1352 283 59 14 chr20 4068493 4068917 -62599088 + LTR47B LTR ERVL 1 443 0 2234 213 92 16 chr20 4068917 4068997 -62599008 - L1MC4 LINE L1 -1080 5488 5416 2585 54 0 25 chr20 4069000 4069317 -62598688 - AluY SINE Alu -1 310 2 4704 233 45 43 chr20 4069319 4070944 -62597061 - L1MC4 LINE L1 -2253 4287 2659 1114 158 0 0 chr20 4070946 4071110 -62596895 - FRAM SINE Alu -20 156 1 1323 140 60 168 chr20 4071111 4071690 -62596315 - L1MC4 LINE L1 -3870 2670 2030 2159 126 0 28 chr20 4071690 4072008 -62595997 - AluSg SINE Alu -1 309 1 2111 90 0 4 chr20 4072008 4072275 -62595730 - AluSx SINE Alu -13 299 34 1323 140 60 168 chr20 4072275 4072318 -62595687 - L1MC4 LINE L1 -4377 2163 2117 733 138 15 62 chr20 4072318 4072434 -62595571 + FLAM_C SINE Alu 14 125 -187 2202 96 55 0 chr20 4072434 4072726 -62595279 + AluSc SINE Alu 1 308 -1 733 138 15 62 chr20 4072726 4072739 -62595266 + FLAM_C SINE Alu 125 137 -175 8205 178 30 69 chr20 4072739 4072833 -62595172 - L1MC4 LINE L1 -4417 2123 2027 2400 100 3 6 chr20 4072833 4073144 -62594861 + AluSg SINE Alu 1 310 0 8205 178 30 69 chr20 4073144 4073880 -62594125 - L1MC4 LINE L1 -4513 2027 1264 2175 116 0 13 chr20 4073880 4074182 -62593823 - AluSx SINE Alu -14 298 1 8205 178 30 69 chr20 4074182 4075582 -62592423 - L1MC4 LINE L1 -5276 1264 16 391 331 77 14 chr20 4076040 4076327 -62591678 - L2 LINE L2 -666 2648 2344 531 233 8 8 chr20 4076754 4076874 -62591131 + L2 LINE L2 3193 3312 -1 2580 27 0 3 chr20 4077645 4077946 -62590059 - AluY SINE Alu -11 300 1 1341 199 112 38 chr20 4078559 4078926 -62589079 - MSTD LTR MaLR -2 394 1 2241 113 30 27 chr20 4078961 4079297 -62588708 - MER1B DNA MER1_type 0 337 1 2221 177 18 111 chr20 4079361 4079476 -62588529 + MER44D DNA MER2_type 1 125 -2362 2204 116 3 0 chr20 4079476 4079786 -62588219 + AluSx SINE Alu 1 311 -1 2221 177 18 111 chr20 4079786 4080273 -62587732 + MER44D DNA MER2_type 125 602 -3 201 74 0 0 chr20 4081061 4081088 -62586917 + (TA)n Simple_repeat Simple_repeat 1 27 0 230 192 19 0 chr20 4081107 4081159 -62586846 + LTR66 LTR ERVL 389 441 -169 337 190 0 130 chr20 4081182 4081282 -62586723 - L1MC4 LINE L1 -1342 6700 6614 * 430 267 0 0 chr20 4081278 4081368 -62586637 + L1MC4 LINE L1 6614 6703 -1339 425 221 28 0 chr20 4081372 4081478 -62586527 + L1MC4 LINE L1 1995 6983 -1339 386 311 0 0 chr20 4081398 4081488 -62586517 - L1MC4 LINE L1 -1339 6703 6614 * 308 196 0 0 chr20 4081479 4081530 -62586475 + L1MC4 LINE L1 6933 6983 -1339 * 418 203 32 32 chr20 4081533 4081656 -62586349 - MLT1H LTR MaLR 0 549 427 679 286 6 17 chr20 4081670 4081845 -62586160 - MLT1H LTR MaLR -271 278 106 1039 156 0 0 chr20 4081853 4082020 -62585985 - FRAM SINE Alu -9 167 1 474 172 149 0 chr20 4082025 4082112 -62585893 - MLT1H LTR MaLR -449 100 1 242 303 191 25 chr20 4082116 4082393 -62585612 + L2 LINE L2 2430 2752 -562 325 288 45 18 chr20 4082639 4082750 -62585255 - LTR67 LTR ERVL -288 269 156 385 248 205 24 chr20 4083316 4083570 -62584435 + LTR16A1 LTR ERVL 1 300 -157 1211 129 67 0 chr20 4083958 4084152 -62583853 - AluJo SINE Alu -10 302 96 194 335 181 11 chr20 4084467 4084649 -62583356 + L2 LINE L2 2599 2811 -503 397 136 0 0 chr20 4084649 4084708 -62583297 + AluS SINE Alu 1 59 -249 1428 92 0 5 chr20 4084708 4084903 -62583102 - AluSx SINE Alu -118 194 1 1424 238 24 84 chr20 4084903 4085352 -62582653 + MLT2B1 LTR ERVL 15 511 -43 189 107 0 0 chr20 4085352 4085380 -62582625 + (TATATG)n Simple_repeat Simple_repeat 2 29 0 1424 238 24 84 chr20 4085380 4085415 -62582590 + MLT2B1 LTR ERVL 511 547 -7 1244 182 81 36 chr20 4085447 4085561 -62582444 - MER33 DNA MER1_type -2262 323 216 2153 103 3 0 chr20 4085561 4085853 -62582152 + AluSp SINE Alu 1 293 -20 1244 182 81 36 chr20 4085853 4086046 -62581959 - MER33 DNA MER1_type -2369 216 2 2081 115 10 0 chr20 4086076 4086372 -62581633 + AluSx SINE Alu 1 299 -13 879 213 66 5 chr20 4086621 4086818 -62581187 + L1MC/D LINE L1 47 255 -6141 262 286 13 0 chr20 4086826 4086903 -62581102 + L1MC/D LINE L1 656 733 -5663 2279 274 33 55 chr20 4086904 4087805 -62580200 + L1MC/D LINE L1 808 1681 -4715 1946 128 0 3 chr20 4087805 4088116 -62579889 + AluSg SINE Alu 1 310 0 2279 274 33 55 chr20 4088116 4088361 -62579644 + L1MC/D LINE L1 1681 1930 -4466 4759 208 49 66 chr20 4088396 4088451 -62579554 + L1MC/D LINE L1 3662 3716 -2499 1624 183 0 7 chr20 4088451 4088773 -62579232 - AluJb SINE Alu 0 320 1 4759 208 49 66 chr20 4088773 4088922 -62579083 + L1MC/D LINE L1 3716 3866 -2349 1800 55 0 0 chr20 4088922 4089139 -62578866 + AluY SINE Alu 1 217 -94 4759 208 49 66 chr20 4089139 4089710 -62578295 + L1MC/D LINE L1 3866 4445 -1770 387 0 0 0 chr20 4089710 4089753 -62578252 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2172 82 0 0 chr20 4089755 4090034 -62577971 - AluY SINE Alu -31 280 2 4759 208 49 66 chr20 4090034 4090759 -62577246 + L1MC/D LINE L1 4446 5143 -1072 1432 134 0 0 chr20 4090800 4091009 -62576996 - AluSq SINE Alu -104 209 1 702 209 65 44 chr20 4091011 4091306 -62576699 + L1MC/D LINE L1 5230 5526 -748 2382 73 0 0 chr20 4091312 4091614 -62576391 - AluSx SINE Alu -10 302 1 1931 183 38 60 chr20 4091661 4092130 -62575875 - MLT1C LTR MaLR -8 459 1 486 226 41 81 chr20 4092132 4092389 -62575616 + L1MC5 LINE L1 7238 7493 -519 743 182 38 44 chr20 4092421 4092580 -62575425 + FAM SINE Alu 1 158 -17 335 127 51 136 chr20 4092645 4092739 -62575266 - MER33 DNA MER1_type -2261 363 279 2297 92 3 9 chr20 4092739 4093054 -62574951 + AluSp SINE Alu 1 313 0 335 127 51 136 chr20 4093054 4093077 -62574928 - MER33 DNA MER1_type -2345 279 256 28 29 0 0 chr20 4093083 4093118 -62574887 + AT_rich Low_complexity Low_complexity 1 35 0 2037 217 133 16 chr20 4093165 4093663 -62574342 - MLT1E2 LTR MaLR -64 562 7 831 229 0 10 chr20 4093667 4093872 -62574133 - MER33 DNA MER1_type -121 203 1 371 301 75 49 chr20 4093872 4094098 -62573907 + L1MC4 LINE L1 7604 7835 -207 1659 219 30 30 chr20 4094098 4094505 -62573500 - LTR52 LTR ERVL -2 419 13 2232 89 3 0 chr20 4094508 4094811 -62573194 + AluSp SINE Alu 1 304 -9 873 217 6 0 chr20 4094831 4094988 -62573017 - LTR52-int LTR ERVL -1 3555 3398 554 220 28 44 chr20 4094998 4095180 -62572825 + L1M4 LINE L1 5150 5328 -818 600 191 14 7 chr20 4095186 4095327 -62572678 + L1 LINE L1 5190 5331 -815 2281 86 10 0 chr20 4095327 4095628 -62572377 + AluSx SINE Alu 1 304 -8 6017 233 42 44 chr20 4095631 4096245 -62571760 - LTR52-int LTR ERVL -1895 1661 1047 2104 108 0 0 chr20 4096245 4096540 -62571465 + AluSx SINE Alu 1 295 -17 6017 233 42 44 chr20 4096540 4097588 -62570417 - LTR52-int LTR ERVL -2509 1047 3 2133 108 0 0 chr20 4097691 4097987 -62570018 + AluSx SINE Alu 1 296 -16 1794 143 7 23 chr20 4098259 4098567 -62569438 + AluJo SINE Alu 1 303 -9 1989 116 0 0 chr20 4098589 4098865 -62569140 + AluSg SINE Alu 1 276 -34 198 0 0 0 chr20 4098868 4098890 -62569115 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 600 273 42 0 chr20 4098890 4099055 -62568950 + LTR52-int LTR ERVL 295 466 -3090 495 216 30 82 chr20 4099088 4099143 -62568862 + MIR SINE MIR 92 148 -114 2352 139 21 3 chr20 4099143 4099525 -62568480 - MLT1B LTR MaLR 0 390 2 495 216 30 82 chr20 4099525 4099603 -62568402 + MIR SINE MIR 148 218 -44 834 181 7 0 chr20 4099641 4099790 -62568215 - FRAM SINE Alu -26 150 1 231 146 0 0 chr20 4099800 4099841 -62568164 + (TC)n Simple_repeat Simple_repeat 2 42 0 1988 102 18 0 chr20 4099841 4100115 -62567890 - AluSx SINE Alu -32 280 2 540 158 338 0 chr20 4100383 4100516 -62567489 + MER5A DNA MER1_type 3 180 -9 229 279 79 50 chr20 4100615 4100755 -62567250 + L2 LINE L2 2614 2757 -557 525 335 56 19 chr20 4100834 4101049 -62566956 + MIR SINE MIR 24 246 -16 281 221 65 0 chr20 4101167 4101244 -62566761 + LTR16C LTR ERVL 71 152 -339 301 176 0 0 chr20 4101252 4101303 -62566702 + MIR SINE MIR 132 182 -80 639 210 123 0 chr20 4101991 4102129 -62565876 - MER45A DNA AcHobo -23 155 1 1132 204 133 31 chr20 4102581 4103031 -62564974 + LTR33 LTR ERVL 24 519 -2 265 381 8 0 chr20 4103340 4103458 -62564547 + (CAGG)n Simple_repeat Simple_repeat 1 119 0 484 292 119 0 chr20 4103711 4103896 -62564109 + MLT1K LTR MaLR 376 582 -6 269 308 33 0 chr20 4103996 4104087 -62563918 + MIR SINE MIR 39 132 -76 563 226 178 51 chr20 4104357 4104649 -62563356 + MLT1K LTR MaLR 212 540 -48 985 195 5 5 chr20 4104801 4104986 -62563019 + MER5A DNA MER1_type 3 187 -2 242 212 44 97 chr20 4105035 4105148 -62562857 + LTR16A1 LTR ERVL 20 126 -331 366 240 4 0 chr20 4105755 4106006 -62561999 + (TG)n Simple_repeat Simple_repeat 1 252 0 444 219 32 45 chr20 4106343 4106498 -62561507 + L1ME4a LINE L1 5967 6119 -2 1560 241 138 95 chr20 4106673 4106862 -62561143 - L1MC4 LINE L1 -63 7979 7800 1975 129 0 3 chr20 4106862 4107156 -62560849 - AluSx SINE Alu -19 293 1 1560 241 138 95 chr20 4107156 4108570 -62559435 - L1MC4 LINE L1 -242 7800 6448 787 143 0 30 chr20 4108570 4108703 -62559302 - FLAM_C SINE Alu -4 129 1 1560 241 138 95 chr20 4108703 4109146 -62558859 - L1MC4 LINE L1 -1594 6448 6025 2465 156 21 12 chr20 4109146 4109568 -62558437 - MSTB LTR MaLR 0 426 1 1560 241 138 95 chr20 4109568 4109719 -62558286 - L1MC4 LINE L1 -2017 6025 5593 483 63 0 0 chr20 4110284 4110347 -62557658 + (TTC)n Simple_repeat Simple_repeat 1 63 0 1905 136 33 0 chr20 4110350 4110828 -62557177 - AluSq SINE Alu 0 488 1 645 318 161 35 chr20 4110878 4110994 -62557011 - L2 LINE L2 -605 2709 2609 2005 131 0 0 chr20 4110994 4111299 -62556706 - AluSq SINE Alu -4 309 5 645 318 161 35 chr20 4111299 4111901 -62556104 - L2 LINE L2 -705 2609 1853 2153 68 0 24 chr20 4111901 4112194 -62555811 + AluSc SINE Alu 1 286 -23 645 318 161 35 chr20 4112194 4112376 -62555629 - L2 LINE L2 -1461 1853 1695 1995 125 3 0 chr20 4112388 4112684 -62555321 - AluSx SINE Alu -15 297 1 21 0 0 0 chr20 4112944 4112965 -62555040 + AT_rich Low_complexity Low_complexity 1 21 0 1249 96 0 11 chr20 4113775 4113953 -62554052 + FRAM SINE Alu 1 176 0 769 167 48 0 chr20 4113967 4114121 -62553884 + FLAM_C SINE Alu 2 161 0 2195 92 3 3 chr20 4114297 4114591 -62553414 + AluSc SINE Alu 1 294 -15 1564 151 0 89 chr20 4115233 4115557 -62552448 + AluJo SINE Alu 1 295 -17 429 276 58 1 chr20 4115744 4115861 -62552144 + MLT1J LTR MaLR 59 218 -286 836 169 0 0 chr20 4116113 4116255 -62551750 - FLAM_C SINE Alu -1 142 1 1889 123 0 36 chr20 4116304 4116613 -62551392 - AluSx SINE Alu -1 311 14 695 100 9 0 chr20 4116671 4116781 -62551224 + (TTCC)n Simple_repeat Simple_repeat 4 114 0 340 137 0 0 chr20 4116781 4116832 -62551173 + (TTTC)n Simple_repeat Simple_repeat 3 53 0 1562 179 11 0 chr20 4116832 4117105 -62550900 - AluJb SINE Alu -36 276 1 1761 154 3 7 chr20 4117108 4117436 -62550569 - AluSx SINE Alu 0 327 1 1926 104 4 0 chr20 4117447 4117715 -62550290 - AluSc SINE Alu -11 298 30 1050 311 58 22 chr20 4117788 4118551 -62549454 - L1M4 LINE L1 -2007 4139 3350 1667 142 46 0 chr20 4118659 4118941 -62549064 - AluSx SINE Alu -17 295 1 314 333 6 54 chr20 4118942 4119110 -62548895 - L1M4 LINE L1 -2984 3162 3003 1439 249 51 30 chr20 4119126 4119559 -62548446 - LTR16A1 LTR ERVL -15 442 1 574 130 130 26 chr20 4119589 4119704 -62548301 + FLAM_C SINE Alu 10 136 -7 244 294 51 65 chr20 4119754 4119919 -62548086 - L1M4 LINE L1 -3184 2962 2796 2154 92 0 0 chr20 4119919 4120236 -62547769 - AluY SINE Alu 0 317 1 244 294 51 65 chr20 4120236 4120563 -62547442 - L1M4 LINE L1 -3350 2796 2476 453 268 61 37 chr20 4120622 4120868 -62547137 + L1MEc LINE L1 1532 1783 -4613 2241 101 7 0 chr20 4120926 4121233 -62546772 - AluSp SINE Alu -4 309 1 2234 193 56 39 chr20 4121487 4121615 -62546390 + L1ME1 LINE L1 5260 5384 -782 1972 135 0 14 chr20 4121615 4121912 -62546093 + AluSx SINE Alu 1 293 -19 2234 193 56 39 chr20 4121912 4122042 -62545963 + L1ME1 LINE L1 5384 5510 -656 1061 174 12 0 chr20 4122042 4122214 -62545791 + FAM SINE Alu 1 174 -1 2234 193 56 39 chr20 4122214 4122695 -62545310 + L1ME1 LINE L1 5510 6165 -1 26 0 0 0 chr20 4123028 4123054 -62544951 + AT_rich Low_complexity Low_complexity 1 26 0 2003 145 61 112 chr20 4123156 4123646 -62544359 + L1MC2 LINE L1 5871 6335 -9 550 148 59 0 chr20 4123650 4123751 -62544254 + HsTC2 DNA Tc2 1610 1716 -182 1813 166 3 3 chr20 4123790 4124092 -62543913 - AluJb SINE Alu -10 302 1 226 163 0 0 chr20 4124114 4124157 -62543848 + HsTC2 DNA Tc2 1856 1898 0 389 145 66 163 chr20 4124157 4124326 -62543679 + HsTC2 DNA Tc2 1712 1851 -47 2134 99 0 3 chr20 4124326 4124618 -62543387 + AluSg SINE Alu 6 296 -14 389 145 66 163 chr20 4124618 4124663 -62543342 + HsTC2 DNA Tc2 1851 1899 1 955 198 0 0 chr20 4124793 4124970 -62543035 - FRAM SINE Alu -1 175 1 364 221 55 47 chr20 4124972 4125099 -62542906 + L1ME4a LINE L1 5966 6093 -28 854 118 47 16 chr20 4125132 4125259 -62542746 + FLAM_C SINE Alu 1 131 -2 1380 204 28 11 chr20 4125389 4125640 -62542365 + L1MB4 LINE L1 5883 6141 -39 1346 138 142 4 chr20 4125640 4125747 -62542258 + AluJo SINE Alu 1 92 -220 273 57 0 0 chr20 4125747 4125782 -62542223 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1346 138 142 4 chr20 4125782 4125934 -62542071 + AluJo SINE Alu 92 296 -16 1380 204 28 11 chr20 4125934 4125967 -62542038 + L1MB4 LINE L1 6141 6172 -8 654 302 298 1 chr20 4125979 4126671 -62541334 - L2 LINE L2 -932 2382 1486 932 171 74 0 chr20 4126780 4126956 -62541049 + MER5A DNA MER1_type 1 189 0 185 211 19 0 chr20 4128154 4128206 -62539799 + CT-rich Low_complexity Low_complexity 2 54 0 877 134 8 0 chr20 4129004 4129138 -62538867 + AluJo SINE Alu 1 135 -177 2109 123 0 7 chr20 4129138 4129446 -62538559 + AluSp SINE Alu 1 306 -7 1965 126 0 46 chr20 4129477 4129802 -62538203 + AluSq SINE Alu 1 310 -3 357 189 0 14 chr20 4130117 4130191 -62537814 + MER53 DNA DNA 105 177 -12 7729 32 7 17 chr20 4130197 4131341 -62536664 - L1PA5 LINE L1 0 6154 5016 2820 13 0 0 chr20 4131341 4131658 -62536347 - AluYb8 SINE Alu -1 317 1 7729 32 7 17 chr20 4131658 4131856 -62536149 - L1PA5 LINE L1 -1138 5016 4818 2089 90 0 0 chr20 4132079 4132346 -62535659 + AluSq SINE Alu 1 267 -46 26 0 0 0 chr20 4132358 4132384 -62535621 + AT_rich Low_complexity Low_complexity 1 26 0 1649 102 0 8 chr20 4132402 4132638 -62535367 + AluSg/x SINE Alu 72 305 -5 302 214 258 0 chr20 4132638 4132717 -62535288 + MER5A DNA MER1_type 61 167 -22 393 316 58 36 chr20 4133462 4133686 -62534319 - MLT1H LTR MaLR -123 286 63 635 275 81 6 chr20 4133828 4134211 -62533794 + MLT1J2 LTR MaLR 3 450 0 305 280 137 30 chr20 4134389 4134557 -62533448 - MIR SINE MIR 0 262 77 456 179 60 0 chr20 4134883 4134967 -62533038 + MLT1C LTR MaLR 2 90 -377 311 244 16 57 chr20 4134981 4135104 -62532901 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 261 219 16 0 chr20 4135126 4135142 -62532863 + MER39 LTR ERV1 6 20 -911 279 0 0 0 chr20 4135142 4135173 -62532832 + (CA)n Simple_repeat Simple_repeat 2 32 0 261 219 16 0 chr20 4135173 4135220 -62532785 + MER39 LTR ERV1 20 70 -861 1709 170 28 96 chr20 4135324 4135923 -62532082 + MER39 LTR ERV1 71 565 -201 1721 196 45 45 chr20 4135984 4136006 -62531999 + MER21B LTR ERV1 449 470 -393 1947 120 21 0 chr20 4136006 4136297 -62531708 - AluSx SINE Alu -15 297 1 1721 196 45 45 chr20 4136297 4136556 -62531449 + MER21B LTR ERV1 470 734 -129 2114 106 3 0 chr20 4136556 4136870 -62531135 + AluSp SINE Alu 1 315 0 1721 196 45 45 chr20 4136870 4136990 -62531015 + MER21B LTR ERV1 733 852 -11 1301 170 92 60 chr20 4136999 4137092 -62530913 + MLT1C LTR MaLR 86 175 -292 1978 103 33 0 chr20 4137092 4137395 -62530610 + AluSg SINE Alu 1 312 0 2140 79 4 0 chr20 4137404 4137715 -62530290 + AluY SINE Alu 1 312 0 1301 170 92 60 chr20 4137715 4137979 -62530026 + MLT1C LTR MaLR 182 467 0 880 242 82 35 chr20 4137982 4138329 -62529676 + MLT1H LTR MaLR 80 498 -57 1787 87 121 8 chr20 4138329 4138594 -62529411 + AluSx SINE Alu 1 295 -17 880 242 82 35 chr20 4138594 4138654 -62529351 + MLT1H LTR MaLR 498 554 -1 22 0 0 0 chr20 4138792 4138814 -62529191 + AT_rich Low_complexity Low_complexity 1 22 0 564 228 21 35 chr20 4138870 4139015 -62528990 - LTR67 LTR ERVL -379 178 36 286 325 98 8 chr20 4139185 4139308 -62528697 + MLT1K LTR MaLR 138 271 -317 361 212 185 20 chr20 4139549 4139563 -62528442 - MIR SINE MIR -56 206 196 2301 86 3 0 chr20 4139563 4139865 -62528140 - AluSx SINE Alu -9 303 1 361 212 185 20 chr20 4139865 4140001 -62528004 - MIR SINE MIR -66 196 31 262 194 19 68 chr20 4140473 4140576 -62527429 + (CGGGG)n Simple_repeat Simple_repeat 5 102 0 21 95 0 0 chr20 4140843 4140906 -62527099 + GC_rich Low_complexity Low_complexity 1 63 0 23 0 0 0 chr20 4141012 4141035 -62526970 + GC_rich Low_complexity Low_complexity 1 23 0 1137 326 126 35 chr20 4141813 4142576 -62525429 + L2 LINE L2 1603 2295 -1018 2370 88 0 0 chr20 4142576 4142883 -62525122 - AluSq SINE Alu -6 307 1 1137 326 126 35 chr20 4142883 4143662 -62524343 + L2 LINE L2 2295 3297 -16 607 236 188 0 chr20 4144451 4144616 -62523389 - MIR SINE MIR -26 236 41 258 286 11 55 chr20 4144635 4144726 -62523279 - MIR SINE MIR -169 93 7 511 221 105 70 chr20 4146012 4146118 -62521887 - MER5A DNA MER1_type -1 188 71 1699 130 71 22 chr20 4146118 4146414 -62521591 - AluSx SINE Alu 0 309 1 511 221 105 70 chr20 4146414 4146478 -62521527 - MER5A DNA MER1_type -118 71 11 343 232 45 18 chr20 4147160 4147272 -62520733 + MIR SINE MIR 34 148 -60 25 31 0 0 chr20 4147356 4147388 -62520617 + AT_rich Low_complexity Low_complexity 1 32 0 325 200 71 0 chr20 4147865 4147950 -62520055 - MER103 DNA DNA -46 120 30 203 61 0 30 chr20 4148174 4148207 -62519798 + MIR SINE MIR 109 140 -68 2165 114 0 0 chr20 4148495 4148794 -62519211 - AluSx SINE Alu -13 299 1 361 217 33 11 chr20 4148897 4148989 -62519016 + MIR SINE MIR 84 177 -85 188 222 22 0 chr20 4149362 4149407 -62518598 - L2 LINE L2 -557 2757 2712 2441 44 0 0 chr20 4149648 4149946 -62518059 - AluY SINE Alu -8 303 6 2145 91 42 0 chr20 4150877 4151163 -62516842 - AluSq SINE Alu -15 298 1 234 271 0 0 chr20 4151241 4151300 -62516705 + MIR SINE MIR 95 153 -109 393 282 113 15 chr20 4152145 4152370 -62515635 + MIR SINE MIR 11 258 -4 333 155 42 0 chr20 4153516 4153587 -62514418 + L2 LINE L2 3239 3312 -1 191 200 36 0 chr20 4154174 4154229 -62513776 + L2 LINE L2 2924 2980 -292 181 263 0 0 chr20 4154497 4154535 -62513470 - MIR SINE MIR -102 160 123 436 233 68 48 chr20 4154914 4155060 -62512945 - MER5B DNA MER1_type -8 170 22 2679 197 48 10 chr20 4155250 4155768 -62512237 - MLT1F LTR MaLR -4 538 1 343 203 203 72 chr20 4156139 4156277 -62511728 - MIR SINE MIR -82 180 25 1510 190 33 53 chr20 4156645 4156798 -62511207 - AluJo SINE Alu -8 294 148 2407 72 0 3 chr20 4156798 4157105 -62510900 - AluSg SINE Alu -4 306 1 1510 190 33 53 chr20 4157105 4157251 -62510754 - AluJo SINE Alu -154 148 1 311 198 74 12 chr20 4157458 4157539 -62510466 - MIR SINE MIR -112 150 65 916 188 0 0 chr20 4158106 4158260 -62509745 - AluJ SINE Alu -19 293 140 244 262 65 19 chr20 4159345 4159452 -62508553 - MIR3 SINE MIR -82 126 15 2344 87 0 0 chr20 4160298 4160608 -62507397 - AluSx SINE Alu -2 310 1 925 185 0 0 chr20 4160635 4160879 -62507126 - AluJo SINE Alu 0 364 121 795 129 16 8 chr20 4160919 4161043 -62506962 - AluJo SINE Alu -177 135 11 186 189 81 0 chr20 4161772 4161809 -62506196 + L2 LINE L2 3225 3264 -8 515 188 0 0 chr20 4162215 4162300 -62505705 - AluSg/x SINE Alu -9 301 217 180 0 0 0 chr20 4163028 4163048 -62504957 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1563 268 44 24 chr20 4164851 4165392 -62502613 - L1ME3 LINE L1 -21 6141 5590 199 197 0 30 chr20 4166521 4166587 -62501418 + CT-rich Low_complexity Low_complexity 4 67 0 1859 115 0 4 chr20 4167771 4168031 -62499974 - AluSx SINE Alu -11 301 43 447 257 0 18 chr20 4168133 4168246 -62499759 - MLT1H LTR MaLR -438 111 1 28 86 0 0 chr20 4169510 4169580 -62498425 + AT_rich Low_complexity Low_complexity 1 70 0 840 213 66 5 chr20 4169649 4169786 -62498219 + MER3 DNA MER1_type 1 155 -54 2156 106 10 0 chr20 4169786 4170088 -62497917 - AluSg SINE Alu -5 305 1 840 213 66 5 chr20 4170088 4170147 -62497858 + MER3 DNA MER1_type 155 209 0 405 215 58 0 chr20 4170157 4170291 -62497714 - L1M4 LINE L1 -1979 4167 4020 2323 103 3 0 chr20 4170422 4170734 -62497271 - AluSp SINE Alu 0 313 1 553 310 92 50 chr20 4170967 4171348 -62496657 - MARNA DNA Mariner -122 464 68 778 234 49 0 chr20 4171392 4171576 -62496429 + MIR SINE MIR 21 213 -49 270 367 110 4 chr20 4172284 4172521 -62495484 + L2 LINE L2 2715 2976 -338 215 194 235 20 chr20 4172622 4172720 -62495285 + L2 LINE L2 3138 3256 -16 564 176 126 75 chr20 4175652 4175728 -62492277 - MER3 DNA MER1_type 0 209 138 1877 141 3 66 chr20 4175728 4176047 -62491958 - AluJb SINE Alu -13 299 1 564 176 126 75 chr20 4176047 4176169 -62491836 - MER3 DNA MER1_type -71 138 1 843 250 58 43 chr20 4176681 4176957 -62491048 - MLT1J LTR MaLR -199 312 33 443 95 0 0 chr20 4176969 4177032 -62490973 + FRAM/FAM SINE Alu 24 86 -90 287 116 0 0 chr20 4177121 4177164 -62490841 + MER5A DNA MER1_type 33 75 -114 1606 127 5 0 chr20 4177164 4177384 -62490621 + AluSg/x SINE Alu 84 304 -6 21 0 0 0 chr20 4177413 4177434 -62490571 + AT_rich Low_complexity Low_complexity 1 21 0 1606 127 5 0 chr20 4177448 4177668 -62490337 + AluSg/x SINE Alu 84 304 -6 326 237 76 42 chr20 4177717 4177784 -62490221 + MER5A DNA MER1_type 61 135 -54 1792 160 0 20 chr20 4177784 4178077 -62489928 + AluJo SINE Alu 14 300 -12 326 237 76 42 chr20 4178077 4178127 -62489878 + MER5A DNA MER1_type 135 182 -7 307 335 112 61 chr20 4178219 4178595 -62489410 + L2 LINE L2 2870 3264 -8 * 570 245 82 19 chr20 4178592 4178809 -62489196 - MIR SINE MIR 0 262 40 2436 84 3 0 chr20 4179854 4180165 -62487840 - AluSx SINE Alu 0 312 1 927 157 0 0 chr20 4180345 4180479 -62487526 + FRAM SINE Alu 28 161 -15 834 167 0 0 chr20 4180604 4180724 -62487281 + FLAM_C SINE Alu 1 120 -23 332 308 18 18 chr20 4180779 4180948 -62487057 + (CA)n Simple_repeat Simple_repeat 2 170 0 1188 156 35 25 chr20 4181287 4181486 -62486519 - AluJo SINE Alu -28 284 84 250 282 13 0 chr20 4181507 4181585 -62486420 + (CA)n Simple_repeat Simple_repeat 2 80 0 2161 126 7 0 chr20 4181692 4181986 -62486019 - AluSx SINE Alu -16 296 1 229 250 38 0 chr20 4182161 4182241 -62485764 - L1MC4a LINE L1 -1868 5940 5858 2390 103 0 3 chr20 4182243 4182555 -62485450 + AluSq SINE Alu 1 311 -2 221 287 210 7 chr20 4182949 4183092 -62484913 - MIR SINE MIR -10 252 81 1716 248 79 46 chr20 4183194 4183511 -62484494 + L1ME3 LINE L1 5533 5880 -282 1851 168 14 0 chr20 4183511 4183826 -62484179 + AluJb SINE Alu 1 319 0 1716 248 79 46 chr20 4183826 4184075 -62483930 + L1ME3 LINE L1 5880 6119 -43 271 261 57 11 chr20 4185781 4185869 -62482136 + MLT1K LTR MaLR 494 585 -3 998 283 130 41 chr20 4186106 4186935 -62481070 + L2 LINE L2 2336 3311 -2 2460 68 19 3 chr20 4187746 4188054 -62479951 + AluSp SINE Alu 1 313 0 1668 135 8 4 chr20 4188463 4188707 -62479298 + AluSp SINE Alu 1 245 -68 1289 249 63 89 chr20 4188725 4189145 -62478860 - L1ME3A LINE L1 -26 6144 5714 2303 123 0 0 chr20 4189145 4189455 -62478550 + AluSg SINE Alu 1 310 0 1289 249 63 89 chr20 4189455 4189524 -62478481 - L1ME3A LINE L1 -456 5714 5670 2462 97 0 0 chr20 4189524 4189835 -62478170 - AluSx SINE Alu -1 311 1 1289 249 63 89 chr20 4189835 4189914 -62478091 - L1ME3A LINE L1 -500 5670 5590 583 218 177 0 chr20 4190306 4190453 -62477552 + MER5A DNA MER1_type 4 176 -13 474 257 70 23 chr20 4190709 4190814 -62477191 + MER5A DNA MER1_type 4 121 -68 2781 148 4 40 chr20 4190814 4191033 -62476972 - MER66B LTR ERV1 -4 482 257 2622 44 3 0 chr20 4191033 4191330 -62476675 - AluY SINE Alu -13 298 1 2781 148 4 40 chr20 4191330 4191610 -62476395 - MER66B LTR ERV1 -229 257 1 474 257 70 23 chr20 4191610 4191675 -62476330 + MER5A DNA MER1_type 121 182 -7 188 245 102 0 chr20 4191689 4191738 -62476267 - MER5B DNA MER1_type 0 178 125 351 135 58 106 chr20 4191773 4191830 -62476175 - MER5B DNA MER1_type -2 176 125 2236 88 39 20 chr20 4191830 4191967 -62476038 + AluSx SINE Alu 1 134 -178 2278 102 0 13 chr20 4191967 4192272 -62475733 + AluSq SINE Alu 1 301 -12 2236 88 39 20 chr20 4192272 4192440 -62475565 + AluSx SINE Alu 134 312 0 351 135 58 106 chr20 4192440 4192486 -62475519 - MER5B DNA MER1_type -53 125 78 455 323 45 15 chr20 4192545 4192746 -62475259 - ERVL LTR ERVL -3508 2256 2050 1839 125 3 44 chr20 4193126 4193423 -62474582 - AluSx SINE Alu -10 302 18 1795 163 7 17 chr20 4193517 4193817 -62474188 - AluJo SINE Alu -15 297 1 1119 279 70 52 chr20 4193819 4193855 -62474150 - L1ME3A LINE L1 0 6170 6136 3001 127 6 31 chr20 4193855 4194029 -62473976 + MER70A LTR ERVL 1 178 -294 2327 93 7 3 chr20 4194029 4194331 -62473674 + AluSx SINE Alu 3 305 -7 3001 127 6 31 chr20 4194331 4194638 -62473367 + MER70A LTR ERVL 178 470 -2 1119 279 70 52 chr20 4194638 4194989 -62473016 - L1ME3A LINE L1 -34 6136 5793 2343 103 0 6 chr20 4194989 4195300 -62472705 - AluSq SINE Alu -4 309 1 1119 279 70 52 chr20 4195300 4195334 -62472671 - L1ME3A LINE L1 -377 5793 5761 2221 114 0 0 chr20 4195334 4195633 -62472372 - AluSx SINE Alu -6 306 8 1119 279 70 52 chr20 4195633 4195841 -62472164 - L1ME3A LINE L1 -409 5761 5528 520 223 11 0 chr20 4195841 4195935 -62472070 + MER70A LTR ERVL 128 222 -250 314 176 0 0 chr20 4195949 4196000 -62472005 - MER70A LTR ERVL -139 333 283 523 192 0 0 chr20 4196028 4196148 -62471857 - L1M4 LINE L1 -2454 3692 3573 574 101 0 0 chr20 4196151 4196276 -62471729 + AluSp/q SINE Alu 205 329 0 365 238 159 24 chr20 4196276 4196402 -62471603 - L1M4 LINE L1 -2567 3579 3437 628 260 49 4 chr20 4196415 4196661 -62471344 - L1M4 LINE L1 -2932 3214 2958 * 2781 229 23 26 chr20 4196652 4196908 -62471097 - L1M4 LINE L1 -2812 3334 3079 2587 161 23 73 chr20 4196908 4197449 -62470556 - LTR9 LTR ERV1 0 612 107 2334 96 3 0 chr20 4197449 4197742 -62470263 + AluSq SINE Alu 1 294 -19 2587 161 23 73 chr20 4197742 4197844 -62470161 - LTR9 LTR ERV1 -505 107 1 2781 229 23 26 chr20 4197844 4198199 -62469806 - L1M4 LINE L1 -3067 3079 2724 2596 115 74 5 chr20 4198199 4198633 -62469372 + MER4C LTR ERV1 1 464 -1 2781 229 23 26 chr20 4198633 4198861 -62469144 - L1M4 LINE L1 -3422 2724 2497 2759 153 68 10 chr20 4198871 4199120 -62468885 - L1MC3 LINE L1 -8 7777 7544 2707 182 109 78 chr20 4199120 4199428 -62468577 + MER21B LTR ERV1 1 298 -565 1496 201 30 27 chr20 4199428 4199727 -62468278 + AluJo SINE Alu 1 300 -12 2707 182 109 78 chr20 4199727 4199954 -62468051 + MER21B LTR ERV1 298 516 -347 2506 92 0 0 chr20 4199954 4200258 -62467747 + AluSx SINE Alu 1 304 -8 2707 182 109 78 chr20 4200258 4200556 -62467449 + MER21B LTR ERV1 516 861 -2 2759 153 68 10 chr20 4200556 4200653 -62467352 - L1MC3 LINE L1 -241 7544 7454 2375 103 3 7 chr20 4200653 4200963 -62467042 - AluSq SINE Alu 0 313 5 2759 153 68 10 chr20 4200963 4201190 -62466815 - L1MC3 LINE L1 -331 7454 7170 1634 136 0 0 chr20 4201218 4201439 -62466566 - AluSx SINE Alu -91 221 1 263 305 12 0 chr20 4201651 4201733 -62466272 - L1ME LINE L1 -542 5579 5497 2370 84 0 3 chr20 4201766 4202065 -62465940 + AluSg SINE Alu 1 298 -12 397 233 78 3 chr20 4202426 4202541 -62465464 + MLT1I LTR MaLR 65 171 -238 721 121 60 0 chr20 4203091 4203207 -62464798 + FLAM_A SINE Alu 1 123 -10 21 0 0 0 chr20 4203214 4203235 -62464770 + AT_rich Low_complexity Low_complexity 1 21 0 2017 161 3 0 chr20 4203389 4203699 -62464306 + AluJo SINE Alu 1 311 -1 2336 98 16 7 chr20 4204122 4204428 -62463577 + AluSp SINE Alu 1 309 -4 346 239 8 62 chr20 4204520 4204650 -62463355 + L2 LINE L2 2523 2645 -669 * 841 267 160 11 chr20 4204637 4205011 -62462994 + L2 LINE L2 2884 3313 0 2350 97 0 6 chr20 4205831 4206142 -62461863 - AluSc SINE Alu 0 309 1 2150 114 19 10 chr20 4206169 4206477 -62461528 + AluSx SINE Alu 1 311 -1 284 278 14 0 chr20 4206633 4206705 -62461300 + MLT1L LTR MaLR 1 73 -542 498 129 24 0 chr20 4206733 4206818 -62461187 - MER58 DNA MER1_type -3 2417 2331 315 153 42 14 chr20 4206823 4206895 -62461110 - MER58 DNA MER1_type -188 153 80 2448 85 0 28 chr20 4206899 4207033 -62460972 + AluSx SINE Alu 1 137 -175 2507 68 0 10 chr20 4207033 4207343 -62460662 + AluY SINE Alu 1 307 -4 2448 85 0 28 chr20 4207343 4207525 -62460480 + AluSx SINE Alu 137 308 -4 201 74 0 0 chr20 4208400 4208427 -62459578 + (A)n Simple_repeat Simple_repeat 1 27 0 4032 128 2 11 chr20 4210427 4210942 -62457063 + MER41B LTR ERV1 1 510 -125 2361 87 37 3 chr20 4210942 4211240 -62456765 - AluSq SINE Alu -5 308 1 4032 128 2 11 chr20 4211240 4211365 -62456640 + MER41B LTR ERV1 510 635 0 680 155 43 183 chr20 4213990 4214196 -62453809 + Charlie4a DNA MER1_type 2 141 -1820 2393 177 101 18 chr20 4214196 4214711 -62453294 + LTR64 LTR ERVK 1 558 0 680 155 43 183 chr20 4214711 4214853 -62453152 + Charlie4a DNA MER1_type 141 301 -207 396 157 56 111 chr20 4214859 4214967 -62453038 + L1M4 LINE L1 4829 4930 -1216 838 237 23 0 chr20 4214967 4215182 -62452823 + Charlie4a DNA MER1_type 286 505 -3 2232 121 12 3 chr20 4215336 4215682 -62452323 + MER47A DNA MER2_type 2 350 -16 2480 79 3 10 chr20 4216745 4217050 -62450955 - AluSg SINE Alu -7 303 1 1865 154 40 3 chr20 4217166 4217465 -62450540 - AluSx SINE Alu 0 312 3 1191 245 155 19 chr20 4218073 4218505 -62449500 - LTR16C LTR ERVL 0 491 1 192 167 146 0 chr20 4218984 4219032 -62448973 + L2 LINE L2 2920 2974 -298 216 317 80 38 chr20 4219181 4219443 -62448562 + L2 LINE L2 2392 2664 -650 488 144 0 11 chr20 4219444 4219534 -62448471 + (TTCC)n Simple_repeat Simple_repeat 3 91 0 963 54 0 0 chr20 4219547 4219658 -62448347 - AluSq/x SINE Alu -202 111 1 341 276 22 67 chr20 4219659 4219793 -62448212 + L2 LINE L2 2615 2742 -572 184 306 0 0 chr20 4220243 4220292 -62447713 - L2 LINE L2 -14 3299 3251 231 340 57 0 chr20 4220349 4220455 -62447550 + L2 LINE L2 1314 1425 -1889 757 205 227 4 chr20 4220785 4221058 -62446947 + L2 LINE L2 2015 2348 -966 * 964 247 37 72 chr20 4221051 4221452 -62446553 - L2 LINE L2 -96 3217 2831 749 283 148 24 chr20 4221450 4222138 -62445867 + L2 LINE L2 2542 3309 -4 * 516 86 21 21 chr20 4222744 4222837 -62445168 + (TTTC)n Simple_repeat Simple_repeat 2 94 0 1669 173 73 0 chr20 4222849 4223015 -62444990 - AluJo SINE Alu -2 310 157 276 30 0 0 chr20 4223015 4223048 -62444957 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1669 173 73 0 chr20 4223048 4223170 -62444835 - AluJo SINE Alu -155 157 1 213 229 48 60 chr20 4223211 4223294 -62444711 + L2 LINE L2 3191 3272 0 2362 101 3 3 chr20 4223656 4223964 -62444041 - AluSq SINE Alu -4 309 2 969 224 137 25 chr20 4224413 4224771 -62443234 + LTR16A1 LTR ERVL 7 404 -53 728 206 0 0 chr20 4224773 4224904 -62443101 + FLAM_A SINE Alu 2 132 -1 1837 167 0 4 chr20 4224929 4225198 -62442807 + AluJb SINE Alu 1 268 -44 295 175 16 0 chr20 4225306 4225369 -62442636 + LTR16A1 LTR ERVL 394 457 0 852 266 18 9 chr20 4226479 4226708 -62441297 - L2 LINE L2 -250 3063 2833 248 272 12 25 chr20 4227132 4227213 -62440792 + CT-rich Low_complexity Low_complexity 2 81 0 866 209 102 10 chr20 4227888 4228084 -62439921 + MIR SINE MIR 20 233 -29 198 320 78 31 chr20 4228182 4228310 -62439695 - L2 LINE L2 -822 2492 2359 1337 196 220 14 chr20 4228357 4228776 -62439229 + MLT1D LTR MaLR 1 505 0 821 133 0 66 chr20 4229019 4229170 -62438835 + FRAM SINE Alu 23 163 -13 183 80 0 0 chr20 4229211 4229236 -62438769 + (A)n Simple_repeat Simple_repeat 1 25 0 1540 95 30 22 chr20 4229409 4229588 -62438417 - AluSg/x SINE Alu -11 299 116 234 0 0 0 chr20 4229588 4229614 -62438391 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 1540 95 30 22 chr20 4229614 4229665 -62438340 - AluSg/x SINE Alu -194 116 67 2222 92 0 16 chr20 4229717 4230031 -62437974 + AluSx SINE Alu 1 309 -3 375 212 118 0 chr20 4230467 4230552 -62437453 - MER63 DNA MER1_type -338 724 4 2083 246 97 69 chr20 4231172 4232263 -62435742 + L1MC5 LINE L1 6698 7777 -184 2165 107 7 0 chr20 4232263 4232563 -62435442 + AluSx SINE Alu 1 302 -10 2083 246 97 69 chr20 4232563 4232719 -62435286 + L1MC5 LINE L1 7777 7927 -34 1435 146 18 98 chr20 4232865 4233200 -62434805 + L1MB1 LINE L1 5860 6167 -1 22 0 0 0 chr20 4233201 4233223 -62434782 + AT_rich Low_complexity Low_complexity 1 22 0 221 208 21 0 chr20 4233291 4233339 -62434666 - L2 LINE L2 -1 3271 3223 1140 249 46 51 chr20 4233702 4234075 -62433930 - L1ME3 LINE L1 -51 6111 5741 225 65 0 0 chr20 4234610 4234641 -62433364 + (TG)n Simple_repeat Simple_repeat 2 32 0 281 278 19 37 chr20 4236992 4237100 -62430905 + L1ME3A LINE L1 5843 5948 -222 447 242 115 73 chr20 4237736 4237901 -62430104 - MIR SINE MIR -83 179 8 449 288 89 67 chr20 4237913 4238330 -62429675 - L2 LINE L2 -35 3237 2812 395 316 32 7 chr20 4238475 4238630 -62429375 - L2 LINE L2 -513 2801 2643 312 180 22 22 chr20 4240662 4240751 -62427254 + L1MB7 LINE L1 6096 6184 0 1474 199 0 7 chr20 4240792 4241096 -62426909 - AluJb SINE Alu 0 303 2 247 301 0 36 chr20 4241158 4241241 -62426764 - L2 LINE L2 -2 3311 3232 708 216 5 90 chr20 4241243 4241465 -62426540 - MLT1D LTR MaLR -302 203 1 529 303 34 6 chr20 4241524 4241702 -62426303 - MIR SINE MIR -55 207 25 211 226 57 0 chr20 4241959 4242012 -62425993 - L2 LINE L2 -2 3311 3256 233 272 12 0 chr20 4242857 4242938 -62425067 - L1ME LINE L1 -269 5852 5771 805 148 51 120 chr20 4243201 4243365 -62424640 + MER3 DNA MER1_type 2 149 -60 677 208 0 0 chr20 4243365 4243490 -62424515 - FLAM_A SINE Alu -8 125 1 805 148 51 120 chr20 4243490 4243541 -62424464 + MER3 DNA MER1_type 149 202 -7 21 57 0 0 chr20 4243610 4243645 -62424360 + AT_rich Low_complexity Low_complexity 1 35 0 1832 155 0 0 chr20 4243707 4244004 -62424001 - AluSg SINE Alu -13 297 1 27 29 0 0 chr20 4244004 4244038 -62423967 + AT_rich Low_complexity Low_complexity 1 34 0 1226 136 11 0 chr20 4244054 4244245 -62423760 - AluJb SINE Alu -119 193 1 233 240 13 40 chr20 4244253 4244328 -62423677 + MER113 DNA MER1_type? 439 511 -10 1299 164 8 4 chr20 4244756 4244994 -62423011 - AluSg SINE Alu -8 302 64 246 189 0 0 chr20 4245094 4245131 -62422874 - Alu SINE Alu -265 37 1 2391 64 0 3 chr20 4245146 4245443 -62422562 - AluSc SINE Alu -13 296 1 248 233 0 27 chr20 4245445 4245518 -62422487 - L1MC4a LINE L1 -1868 5940 5870 545 256 40 74 chr20 4245520 4245696 -62422309 + MIR SINE MIR 61 230 -32 1792 172 3 0 chr20 4245710 4246013 -62421992 - AluJb SINE Alu -8 304 1 1920 95 74 7 chr20 4246026 4246311 -62421694 - AluSx SINE Alu -8 304 1 880 296 57 55 chr20 4246323 4246836 -62421169 - L1MC4a LINE L1 -1993 5815 5302 26 50 0 0 chr20 4247237 4247277 -62420728 + AT_rich Low_complexity Low_complexity 1 40 0 2122 120 0 0 chr20 4247395 4247696 -62420309 + AluSg SINE Alu 1 301 -9 256 130 87 0 chr20 4247857 4247903 -62420102 - L2 LINE L2 -6 3307 3258 2093 94 16 13 chr20 4248522 4248829 -62419176 - AluSc SINE Alu -1 308 1 2162 228 37 42 chr20 4248833 4249550 -62418455 - L1M4c LINE L1 -4659 2300 1606 2034 109 0 0 chr20 4249551 4249827 -62418178 + AluSc SINE Alu 1 276 -33 532 321 103 26 chr20 4250008 4250357 -62417648 - L1M4 LINE L1 -3381 2765 2390 267 165 66 11 chr20 4250397 4250488 -62417517 + (TTTAA)n Simple_repeat Simple_repeat 4 99 0 243 286 128 36 chr20 4250518 4251238 -62416767 + L1M4 LINE L1 4613 5398 -748 5330 136 12 16 chr20 4251238 4252084 -62415921 - MER4D LTR ERV1 0 903 62 1288 254 80 15 chr20 4252147 4252624 -62415381 - HAL1 LINE L1 -295 2212 1705 405 369 77 45 chr20 4253594 4253742 -62414263 - L2 LINE L2 -43 3229 3087 5342 76 18 7 chr20 4253742 4254476 -62413529 - L1PA13 LINE L1 -3 6160 5419 405 369 77 45 chr20 4254476 4254794 -62413211 - L2 LINE L2 -185 3087 2740 3463 154 43 60 chr20 4254794 4255497 -62412508 - LTR8 LTR ERV1 0 691 1 405 369 77 45 chr20 4255497 4255618 -62412387 - L2 LINE L2 -532 2740 2624 239 242 0 16 chr20 4255634 4255696 -62412309 - MER5A DNA MER1_type -120 69 9 915 190 0 22 chr20 4255844 4256023 -62411982 - MER5B DNA MER1_type 0 178 4 22 0 0 0 chr20 4256145 4256167 -62411838 + AT_rich Low_complexity Low_complexity 1 22 0 1192 133 0 0 chr20 4256537 4256710 -62411295 - AluSp SINE Alu -7 306 134 1777 160 66 0 chr20 4256754 4257073 -62410932 + MLT2C1 LTR ERVL 1 340 -57 213 196 0 0 chr20 4257203 4257249 -62410756 + (CATA)n Simple_repeat Simple_repeat 3 48 0 224 137 69 8 chr20 4257270 4257401 -62410604 + (TA)n Simple_repeat Simple_repeat 1 139 0 251 158 58 42 chr20 4257447 4257567 -62410438 + (TTATA)n Simple_repeat Simple_repeat 4 125 0 382 85 34 0 chr20 4257568 4257627 -62410378 + MLT2C1 LTR ERVL 460 520 0 439 293 97 49 chr20 4257633 4257970 -62410035 - HAL1b LINE L1 -785 1477 219 272 30 0 0 chr20 4258461 4258494 -62409511 - MADE1 DNA Mariner -42 38 6 403 237 161 79 chr20 4258973 4259302 -62408703 + MER90 LTR ERV1 1 356 -219 371 178 204 25 chr20 4259578 4259727 -62408278 - MLT1H LTR MaLR -239 310 53 674 222 25 76 chr20 4259734 4259932 -62408073 + MIR SINE MIR 75 262 0 287 224 0 0 chr20 4260420 4260469 -62407536 + MER91 DNA MER1_type 89 137 -3 249 250 75 66 chr20 4261758 4261848 -62406157 - L1ME4a LINE L1 -34 6087 5999 2065 118 10 0 chr20 4261848 4262145 -62405860 - AluSx SINE Alu -8 304 5 249 250 75 66 chr20 4262145 4262282 -62405723 - L1ME4a LINE L1 -122 5999 5858 1592 293 107 20 chr20 4262684 4263957 -62404048 - L1M4 LINE L1 -1886 4260 2877 1799 227 59 70 chr20 4264372 4264967 -62403038 + MER77 LTR ERV1 54 703 -3 181 219 0 24 chr20 4265224 4265265 -62402740 - L2 LINE L2 -4 3268 3229 239 267 50 25 chr20 4265346 4265466 -62402539 + L1M4 LINE L1 2863 2985 -3161 10952 140 95 50 chr20 4266028 4268350 -62399655 + L1MCa LINE L1 5 2429 -3997 1125 238 34 3 chr20 4268360 4268684 -62399321 - L1M4 LINE L1 -3661 2485 2152 * 1963 141 41 69 chr20 4268683 4268726 -62399279 + L1MC1 LINE L1 5812 5855 -478 2176 104 0 16 chr20 4268726 4269034 -62398971 + AluSx SINE Alu 1 303 -9 1963 141 41 69 chr20 4269034 4269380 -62398625 + L1MC1 LINE L1 5855 6190 -143 283 214 18 18 chr20 4269517 4269629 -62398376 + (CCG)n Simple_repeat Simple_repeat 2 113 0 22 56 0 0 chr20 4269877 4269913 -62398092 + GC_rich Low_complexity Low_complexity 1 36 0 476 251 150 24 chr20 4270859 4271066 -62396939 + MIR SINE MIR 7 239 -23 289 340 52 43 chr20 4272348 4272672 -62395333 + L2 LINE L2 2304 2630 -684 276 100 0 0 chr20 4273132 4273172 -62394833 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 893 94 0 24 chr20 4273173 4273300 -62394705 - FLAM_C SINE Alu -19 124 1 2201 87 10 0 chr20 4273480 4273779 -62394226 + AluSc SINE Alu 1 302 -7 254 252 165 52 chr20 4274085 4274200 -62393805 + MIR3 SINE MIR 33 160 -48 1710 159 3 37 chr20 4274255 4274576 -62393429 + AluJb SINE Alu 1 310 -2 245 352 0 0 chr20 4274802 4274873 -62393132 + HAL1 LINE L1 14 84 -2423 482 261 31 15 chr20 4275170 4275240 -62392765 - L2 LINE L2 0 3313 3246 186 43 0 0 chr20 4275240 4275263 -62392742 + (TA)n Simple_repeat Simple_repeat 2 24 0 1628 160 0 42 chr20 4275264 4275576 -62392429 - AluJo SINE Alu -13 299 1 482 261 31 15 chr20 4275576 4275633 -62392372 - L2 LINE L2 -66 3247 3182 704 289 97 62 chr20 4276561 4276993 -62391012 - MLT1J2 LTR MaLR -3 447 1 258 229 16 16 chr20 4278093 4278154 -62389851 + MIR SINE MIR 92 152 -110 471 277 125 64 chr20 4279051 4279394 -62388611 + MLT1I LTR MaLR 46 409 0 434 263 126 11 chr20 4279459 4279634 -62388371 + L1ME LINE L1 5566 5760 -410 220 362 31 6 chr20 4279737 4279900 -62388105 - L2 LINE L2 -1620 1694 1528 1702 230 69 17 chr20 4280302 4280706 -62387299 - MER89-int LTR ERV1 -4582 2219 1795 471 18 0 0 chr20 4280813 4280869 -62387136 + (TA)n Simple_repeat Simple_repeat 1 56 0 1901 143 6 25 chr20 4280894 4281208 -62386797 - MLT2C1 LTR ERVL -59 338 31 4161 244 110 48 chr20 4281209 4282703 -62385302 - MER89-int LTR ERV1 -5212 1589 3 1961 154 63 48 chr20 4282705 4283027 -62384978 - MER89 LTR ERV1 0 559 128 1760 164 43 0 chr20 4283027 4283326 -62384679 + AluJb SINE Alu 1 312 0 1961 154 63 48 chr20 4283326 4283451 -62384554 - MER89 LTR ERV1 -431 128 6 1091 121 86 0 chr20 4284316 4284368 -62383637 - AluSx SINE Alu -123 189 143 290 45 23 0 chr20 4284368 4284412 -62383593 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 1091 121 86 0 chr20 4284412 4284533 -62383472 - AluSx SINE Alu -169 143 1 506 347 155 14 chr20 4284547 4284880 -62383125 - L2 LINE L2 0 3313 2902 9211 45 1 0 chr20 4284880 4285950 -62382055 - MER11C LTR ERVK 0 1071 1 506 347 155 14 chr20 4285950 4286054 -62381951 - L2 LINE L2 -411 2902 2814 1116 143 5 69 chr20 4286160 4286376 -62381629 + AluJb SINE Alu 1 202 -110 867 104 0 30 chr20 4286376 4286510 -62381495 - AluSg/x SINE Alu -10 302 173 657 167 9 0 chr20 4286510 4286618 -62381387 + AluJb SINE Alu 190 298 -14 498 278 200 4 chr20 4286815 4287085 -62380920 - L2 LINE L2 0 3313 2991 1145 279 141 39 chr20 4287224 4287521 -62380484 - L2 LINE L2 -706 2608 2342 1609 149 26 48 chr20 4287521 4287830 -62380175 - AluJo SINE Alu -10 302 1 1145 279 141 39 chr20 4287830 4288243 -62379762 - L2 LINE L2 -972 2342 1826 255 315 9 9 chr20 4288251 4288384 -62379621 + L1P4 LINE L1 5351 5483 -671 1511 177 46 87 chr20 4288671 4288900 -62379105 - MLT1A2 LTR MaLR 0 374 166 1993 138 0 0 chr20 4288900 4289196 -62378809 - AluJb SINE Alu -11 301 6 1511 177 46 87 chr20 4289196 4289356 -62378649 - MLT1A2 LTR MaLR -208 166 1 1966 159 8 74 chr20 4289489 4289880 -62378125 - MLT1A1 LTR MaLR 0 365 1 345 145 0 0 chr20 4289900 4289962 -62378043 + (T)n Simple_repeat Simple_repeat 1 62 0 1993 131 0 7 chr20 4289983 4290288 -62377717 - AluSg SINE Alu -7 303 1 325 197 39 55 chr20 4290304 4290431 -62377574 - L1M4 LINE L1 -2123 4521 4397 188 234 62 47 chr20 4291104 4291168 -62376837 + L2 LINE L2 1764 1828 -1486 989 192 12 0 chr20 4291222 4291389 -62376616 - FAM SINE Alu -6 169 1 729 177 0 0 chr20 4291407 4291531 -62376474 - L1ME3A LINE L1 -5 6165 6042 22 0 0 0 chr20 4291920 4291942 -62376063 + AT_rich Low_complexity Low_complexity 1 22 0 2245 67 0 3 chr20 4291951 4292259 -62375746 + AluY SINE Alu 1 307 0 1708 178 57 22 chr20 4292260 4292626 -62375379 - L1MB8 LINE L1 -7 6171 5793 774 164 47 8 chr20 4292646 4292774 -62375231 + FLAM_C SINE Alu 1 133 0 5025 185 22 100 chr20 4292779 4293770 -62374235 - L1M4 LINE L1 -5350 1192 324 1929 129 28 0 chr20 4293770 4294057 -62373948 - AluSx SINE Alu -17 295 1 5025 185 22 100 chr20 4294057 4294358 -62373647 - L1M4 LINE L1 -6218 324 1 1966 66 66 4 chr20 4294361 4294620 -62373385 - THE1C LTR MaLR 0 375 101 949 254 108 20 chr20 4294619 4294961 -62373044 + MLT1L LTR MaLR 243 614 -1 * 2281 81 0 0 chr20 4295685 4295983 -62372022 - AluY SINE Alu -13 298 1 770 128 43 0 chr20 4296121 4296238 -62371767 - AluJo SINE Alu -176 136 15 217 354 66 21 chr20 4296552 4296751 -62371254 + MIR SINE MIR 2 206 -56 1800 247 42 6 chr20 4296779 4297252 -62370753 - LTR16C LTR ERVL 0 491 2 198 279 16 16 chr20 4299346 4299407 -62368598 + L2 LINE L2 3004 3064 -208 200 94 0 31 chr20 4299487 4299519 -62368486 + (TCC)n Simple_repeat Simple_repeat 3 33 0 234 0 0 0 chr20 4301357 4301383 -62366622 + (TC)n Simple_repeat Simple_repeat 1 26 0 549 299 12 46 chr20 4303071 4303312 -62364693 - L1MC4a LINE L1 -1894 5914 5682 637 234 158 85 chr20 4303316 4303777 -62364228 - MLT1J LTR MaLR -5 506 12 883 278 60 3 chr20 4303781 4304065 -62363940 - L1MC4a LINE L1 -2152 5656 5357 421 217 101 22 chr20 4304285 4304423 -62363582 - MIR SINE MIR -96 166 18 200 33 0 33 chr20 4304467 4304497 -62363508 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 45404 35 3 2 chr20 4304497 4310628 -62357377 - L1PA3 LINE L1 -16 6139 1 289 250 57 34 chr20 4310644 4310732 -62357273 - MIR3 SINE MIR -23 185 96 254 188 21 0 chr20 4311308 4311356 -62356649 + MLT1L LTR MaLR 120 168 -447 2400 64 0 0 chr20 4311501 4311798 -62356207 - AluY SINE Alu -14 297 1 347 239 185 8 chr20 4312054 4312184 -62355821 + MLT1L LTR MaLR 446 598 -17 711 300 65 43 chr20 4312256 4312796 -62355209 - L1MC4a LINE L1 -1940 5868 5317 372 345 45 61 chr20 4312827 4312957 -62355048 - L1MC4a LINE L1 -860 5286 5155 15558 32 0 1 chr20 4312957 4315540 -62352465 - L1PA4 LINE L1 -6 6149 3565 372 345 45 61 chr20 4315540 4315768 -62352237 - L1MC4a LINE L1 -991 5155 4934 2287 239 49 42 chr20 4316502 4316875 -62351130 + L1ME3 LINE L1 5466 5835 -327 2275 154 26 8 chr20 4316875 4317258 -62350747 + MLT1B LTR MaLR 1 390 0 2287 239 49 42 chr20 4317258 4317307 -62350698 + L1ME3 LINE L1 5835 5882 -280 1854 122 0 0 chr20 4317307 4317595 -62350410 + AluSx SINE Alu 27 314 0 2287 239 49 42 chr20 4317595 4317859 -62350146 + L1ME3 LINE L1 5882 6159 -3 360 294 27 55 chr20 4318722 4318868 -62349137 - MIR SINE MIR -64 144 3 637 142 67 8 chr20 4318918 4319052 -62348953 + MER96B DNA MER1_type? 80 221 -196 366 374 138 16 chr20 4319906 4320152 -62347853 - L2 LINE L2 -2 3270 2995 318 98 0 0 chr20 4320174 4320225 -62347780 + (ATG)n Simple_repeat Simple_repeat 3 53 0 229 136 182 30 chr20 4322096 4322162 -62345843 + LTR33A LTR ERVL 7 82 -441 461 303 161 8 chr20 4322201 4322455 -62345550 + LTR16C LTR ERVL 169 461 -30 392 245 19 19 chr20 4322645 4322751 -62345254 - MIR3 SINE MIR -6 202 97 210 337 23 0 chr20 4323116 4323202 -62344803 - L2 LINE L2 -220 3052 2965 424 304 88 0 chr20 4323275 4323456 -62344549 + MIR SINE MIR 2 198 -64 1194 281 98 7 chr20 4323711 4324159 -62343846 - LTR16C LTR ERVL -2 489 1 909 256 86 6 chr20 4324739 4325063 -62342942 - LTR16C LTR ERVL -52 439 90 205 204 41 0 chr20 4325189 4325238 -62342767 + L2 LINE L2 2716 2766 -548 333 296 107 15 chr20 4325852 4326048 -62341957 + LTR16C LTR ERVL 1 214 -277 552 228 28 61 chr20 4326092 4326272 -62341733 + LTR16C LTR ERVL 306 479 -12 628 266 88 57 chr20 4327495 4327792 -62340213 + MLT1K LTR MaLR 103 408 -180 306 194 0 0 chr20 4327819 4327881 -62340124 + GA-rich Low_complexity Low_complexity 2 63 0 463 333 145 0 chr20 4327982 4328210 -62339795 + LTR16C LTR ERVL 3 263 -228 612 205 8 0 chr20 4328263 4328380 -62339625 + LTR16C LTR ERVL 370 487 -4 2316 145 19 128 chr20 4328570 4329047 -62338958 - MSTA LTR MaLR -1 425 1 1269 283 82 50 chr20 4329549 4329964 -62338041 + L2 LINE L2 2449 2849 -464 1939 166 0 7 chr20 4329964 4330266 -62337739 - AluSx SINE Alu -12 300 1 1269 283 82 50 chr20 4330266 4330682 -62337323 + L2 LINE L2 2849 3313 0 21 0 0 0 chr20 4330748 4330769 -62337236 + AT_rich Low_complexity Low_complexity 1 21 0 4104 108 0 0 chr20 4331073 4331627 -62336378 - MER41A LTR ERV1 0 554 1 303 253 20 20 chr20 4332176 4332275 -62335730 - MIR SINE MIR -8 254 156 5469 152 46 20 chr20 4332309 4332612 -62335393 - L1MDb LINE L1 -3890 2516 2222 4148 100 32 0 chr20 4332612 4333174 -62334831 + LTR19B LTR ERV1 1 580 0 5469 152 46 20 chr20 4333174 4334038 -62333967 - L1MDb LINE L1 -4184 2222 1316 218 288 43 0 chr20 4334041 4334129 -62333876 + MIR SINE MIR 97 151 -57 2064 104 24 7 chr20 4334700 4334988 -62333017 - AluSc SINE Alu -16 293 1 547 174 174 19 chr20 4335757 4335918 -62332087 - MER5A DNA MER1_type 0 189 4 2582 78 0 0 chr20 4336114 4336423 -62331582 + AluY SINE Alu 3 311 0 243 279 39 34 chr20 4336610 4336791 -62331214 + L1ME4a LINE L1 4880 5060 -1086 21 36 0 0 chr20 4336837 4336865 -62331140 + AT_rich Low_complexity Low_complexity 1 28 0 230 139 0 0 chr20 4336960 4336996 -62331009 + L1MC3 LINE L1 6079 6114 -1671 2231 184 59 36 chr20 4337357 4337420 -62330585 + MLT1D LTR MaLR 1 61 -444 1872 160 39 64 chr20 4337420 4337826 -62330179 - MSTD LTR MaLR 0 396 1 2231 184 59 36 chr20 4337826 4338256 -62329749 + MLT1D LTR MaLR 61 505 0 592 291 73 36 chr20 4338263 4338676 -62329329 + L1ME4a LINE L1 5513 5940 -181 302 342 91 17 chr20 4339424 4339655 -62328350 + MLT1K LTR MaLR 170 417 -171 803 178 127 35 chr20 4340039 4340236 -62327769 - MLT1I LTR MaLR 0 409 195 788 196 18 48 chr20 4340291 4340356 -62327649 + MER45A DNA AcHobo 1 66 -1515 2626 53 0 0 chr20 4340356 4340658 -62327347 - AluY SINE Alu -9 302 1 788 196 18 48 chr20 4340658 4340760 -62327245 + MER45A DNA AcHobo 66 163 -15 1957 157 13 10 chr20 4340870 4341176 -62326829 - AluJb SINE Alu 0 312 6 502 291 6 28 chr20 4341178 4341360 -62326645 - MLT1I LTR MaLR -231 178 1 1015 245 155 31 chr20 4342543 4342931 -62325074 + LTR16A1 LTR ERVL 6 441 -16 187 231 0 0 chr20 4344092 4344131 -62323874 + L2 LINE L2 3201 3239 -33 240 324 171 9 chr20 4344736 4344847 -62323158 - MIR SINE MIR -64 144 16 881 201 140 13 chr20 4345002 4345231 -62322774 + LOR1a LTR ERV1 240 497 0 1672 241 48 31 chr20 4345506 4345984 -62322021 + LTR16C LTR ERVL 6 491 0 181 216 27 0 chr20 4347227 4347264 -62320741 - MIR SINE MIR -117 145 108 1192 253 88 62 chr20 4347373 4347907 -62320098 - MLT1H LTR MaLR 0 549 2 200 273 18 0 chr20 4348756 4348811 -62319194 - MER5C DNA MER1_type -268 56 1 657 267 138 57 chr20 4348846 4349164 -62318841 + MER115 DNA AcHobo 119 462 -231 182 242 15 0 chr20 4349882 4349948 -62318057 + (CA)n Simple_repeat Simple_repeat 2 68 0 2291 145 89 2 chr20 4351030 4351327 -62316678 - MSTC LTR MaLR 0 428 87 2591 59 0 3 chr20 4351327 4351633 -62316372 - AluY SINE Alu -6 305 1 2291 145 89 2 chr20 4351633 4351729 -62316276 - MSTC LTR MaLR -341 87 1 1359 261 77 3 chr20 4353667 4354043 -62313962 - LTR16C LTR ERVL -3 488 85 2274 93 31 3 chr20 4354862 4355152 -62312853 + AluSx SINE Alu 1 298 -14 319 113 141 14 chr20 4355269 4355340 -62312665 + L1MB3 LINE L1 6103 6182 -1 190 188 0 31 chr20 4356514 4356578 -62311427 + CT-rich Low_complexity Low_complexity 3 64 0 312 299 189 0 chr20 4356957 4357084 -62310921 - MER5A DNA MER1_type 0 189 39 529 227 93 7 chr20 4357135 4357285 -62310720 - MER5B DNA MER1_type -15 163 1 280 200 15 0 chr20 4357739 4357804 -62310201 + MER116 DNA Mariner 1 66 -14 308 267 12 23 chr20 4358239 4358325 -62309680 - L2 LINE L2 0 3272 3188 656 212 190 0 chr20 4358385 4358564 -62309441 - LTR16A LTR ERVL 0 450 238 1250 212 60 50 chr20 4358613 4359010 -62308995 - Charlie4a DNA MER1_type -85 423 23 2492 60 16 0 chr20 4359270 4359585 -62308420 - L1PA7 LINE L1 0 6154 5835 758 73 73 0 chr20 4359585 4359695 -62308310 + L1PA7 LINE L1 5728 5845 -327 300 289 87 47 chr20 4360145 4360294 -62307711 + MLT1I LTR MaLR 60 214 -195 275 226 10 126 chr20 4360372 4360499 -62307506 + MLT1I LTR MaLR 290 533 -16 288 280 112 9 chr20 4360790 4360897 -62307108 - L2 LINE L2 -8 3305 3188 930 269 143 36 chr20 4361542 4361753 -62306252 - MLT1J LTR MaLR -36 475 288 1883 148 58 0 chr20 4361753 4362044 -62305961 + AluJb SINE Alu 1 308 -4 930 269 143 36 chr20 4362044 4362240 -62305765 - MLT1J LTR MaLR -223 288 23 463 283 118 48 chr20 4362240 4362555 -62305450 - MLT1I LTR MaLR 0 409 73 220 353 88 20 chr20 4363911 4364013 -62303992 - L2 LINE L2 -9 3263 3155 29 60 0 0 chr20 4364071 4364121 -62303884 + AT_rich Low_complexity Low_complexity 1 50 0 2335 113 0 0 chr20 4364376 4364687 -62303318 - AluSq SINE Alu -2 311 1 21 0 0 0 chr20 4364748 4364769 -62303236 + AT_rich Low_complexity Low_complexity 1 21 0 4460 170 12 35 chr20 4365380 4366258 -62301747 - L1MB8 LINE L1 -11 6447 5590 1093 231 30 36 chr20 4366259 4366596 -62301409 - L1MB8 LINE L1 -962 5464 5130 4284 189 44 43 chr20 4366604 4367472 -62300533 - L1MB8 LINE L1 -2797 3629 2763 2301 92 7 0 chr20 4367472 4367764 -62300241 - AluY SINE Alu -17 294 1 4284 189 44 43 chr20 4367764 4368261 -62299744 - L1MB8 LINE L1 -3663 2763 2268 1065 110 64 0 chr20 4368261 4368434 -62299571 + L1PB1 LINE L1 5968 6151 0 4284 189 44 43 chr20 4368434 4368922 -62299083 - L1MB8 LINE L1 -4158 2268 1770 2151 141 0 0 chr20 4368922 4369219 -62298786 - AluSx SINE Alu -15 297 1 4284 189 44 43 chr20 4369219 4369285 -62298720 - L1MB8 LINE L1 -4656 1770 1706 6830 166 56 44 chr20 4369333 4370800 -62297205 - L1MCa LINE L1 -4935 1491 7 2501 235 60 16 chr20 4370786 4370861 -62297144 - L1M4 LINE L1 -1816 5141 5071 * 438 36 0 0 chr20 4370861 4370917 -62297088 + (TG)n Simple_repeat Simple_repeat 2 57 0 2501 235 60 16 chr20 4370917 4371542 -62296463 - L1M4 LINE L1 -1886 5071 4410 1282 179 20 32 chr20 4371557 4371808 -62296197 - AluJo SINE Alu -11 301 54 2112 242 47 22 chr20 4371830 4372641 -62295364 - L1M4 LINE L1 -2566 4391 3561 2415 77 0 10 chr20 4372648 4372945 -62295060 - AluY SINE Alu -17 294 1 2743 215 26 72 chr20 4372949 4373666 -62294339 - L1M4 LINE L1 -4659 2300 1659 2226 107 7 0 chr20 4373666 4373955 -62294050 + AluSc SINE Alu 1 291 -18 2743 215 26 72 chr20 4373955 4374391 -62293614 - L1M4 LINE L1 -5300 1659 1205 2042 288 32 25 chr20 4374934 4375775 -62292230 - L1M4 LINE L1 -5914 945 29 1051 287 158 25 chr20 4375848 4376113 -62291892 + L2 LINE L2 2460 2688 -625 2209 151 100 5 chr20 4376113 4376504 -62291501 + MSTA LTR MaLR 1 428 0 1051 287 158 25 chr20 4376504 4377006 -62290999 + L2 LINE L2 2688 3313 0 458 219 185 14 chr20 4377995 4378141 -62289864 + MER5A DNA MER1_type 18 188 -1 493 221 106 0 chr20 4378149 4378262 -62289743 + MER58A DNA MER1_type 1 125 0 2234 158 49 30 chr20 4378262 4378784 -62289221 + MLT2A2 LTR ERVL 1 554 0 649 158 0 0 chr20 4378784 4378877 -62289128 + MER58A DNA MER1_type 121 213 -11 228 237 34 17 chr20 4379202 4379261 -62288744 + L2 LINE L2 3205 3264 -8 329 241 85 42 chr20 4379376 4379511 -62288494 - MIR SINE MIR -63 145 19 346 332 71 33 chr20 4380124 4380461 -62287544 + LTR16C LTR ERVL 121 470 -21 396 239 50 111 chr20 4380474 4380834 -62287171 - L1M4 LINE L1 -1907 4239 3902 2225 123 123 3 chr20 4380863 4381244 -62286761 - MSTA LTR MaLR 0 428 2 324 319 51 37 chr20 4381398 4381614 -62286391 - MLT1H LTR MaLR -300 249 31 299 226 52 43 chr20 4381644 4381759 -62286246 - L1M4 LINE L1 -2234 3912 3797 1945 179 40 37 chr20 4382104 4382650 -62285355 + MLT2A2 LTR ERVL 3 554 0 2477 161 38 5 chr20 4382656 4383078 -62284927 + MLT1C LTR MaLR 29 464 -3 217 306 14 0 chr20 4383487 4383559 -62284446 - MIR SINE MIR -109 153 81 2022 159 34 41 chr20 4383591 4383912 -62284093 - L1PB4 LINE L1 -7 6149 5830 1670 173 38 14 chr20 4383912 4384201 -62283804 - AluJb SINE Alu -16 296 1 2022 159 34 41 chr20 4384201 4384293 -62283712 - L1PB4 LINE L1 -326 5830 5739 458 272 89 19 chr20 4384331 4384489 -62283516 + MER117 DNA MER1_type 1 169 -28 271 276 100 119 chr20 4385104 4385238 -62282767 - L2 LINE L2 0 3272 3137 2428 67 0 0 chr20 4385238 4385535 -62282470 - AluY SINE Alu -14 297 1 271 276 100 119 chr20 4385535 4385711 -62282294 - L2 LINE L2 -135 3137 2968 316 260 156 21 chr20 4386300 4386396 -62281609 - L2 LINE L2 -1 3271 3163 1370 238 125 14 chr20 4386853 4387277 -62280728 + MLT1H LTR MaLR 43 513 -36 2020 127 13 22 chr20 4387277 4387592 -62280413 - L1MC1 LINE L1 -1 6332 6021 484 284 71 31 chr20 4388809 4389034 -62278971 + MLT1K LTR MaLR 332 565 -23 267 233 0 44 chr20 4390124 4390214 -62277791 - LTR67 LTR ERVL -4 553 468 1631 301 60 2 chr20 4390214 4390752 -62277253 - MLT2E LTR ERVL 0 628 60 2290 112 3 0 chr20 4391200 4391495 -62276510 - AluSx SINE Alu -16 296 1 260 309 253 19 chr20 4391495 4391760 -62276245 + L3 LINE CR1 733 1059 -518 285 323 16 55 chr20 4392151 4392278 -62275727 + L3 LINE CR1 1397 1518 -59 620 227 116 17 chr20 4393050 4393222 -62274783 + MER5A DNA MER1_type 1 189 0 755 165 23 78 chr20 4393399 4393603 -62274402 + MER39B LTR ERV1 6 246 -461 1834 138 3 46 chr20 4393632 4393957 -62274048 + L1MA7 LINE L1 5398 5708 -583 3375 123 32 28 chr20 4394096 4394663 -62273342 + L1MA7 LINE L1 5720 6288 -3 3083 145 18 16 chr20 4394697 4395194 -62272811 + MER39 LTR ERV1 210 707 0 2211 116 0 3 chr20 4395731 4396033 -62271972 + AluSg SINE Alu 1 301 -9 1414 128 14 28 chr20 4397248 4397466 -62270539 - AluJo SINE Alu -95 217 3 2267 105 0 0 chr20 4397530 4397824 -62270181 - AluSg SINE Alu -14 296 3 1866 98 91 14 chr20 4398237 4398513 -62269492 + AluSx SINE Alu 1 297 -15 821 176 48 53 chr20 4398923 4399111 -62268894 - MER5A DNA MER1_type -2 187 1 849 168 0 142 chr20 4399433 4399564 -62268441 - AluJb SINE Alu -10 302 205 630 60 0 0 chr20 4399564 4399647 -62268358 - L1PB1 LINE L1 0 6151 6069 849 168 0 142 chr20 4399647 4399705 -62268300 - AluJb SINE Alu -107 205 140 1518 246 64 16 chr20 4399724 4400159 -62267846 - MLT1C LTR MaLR -1 466 11 469 204 78 131 chr20 4400303 4400494 -62267511 + MER5A DNA MER1_type 9 189 0 521 306 99 55 chr20 4400498 4401377 -62266628 - L1M4 LINE L1 -1243 4903 3982 388 266 63 67 chr20 4401402 4401909 -62266096 - L1MDa LINE L1 -961 1940 1296 875 180 17 45 chr20 4402041 4402219 -62265786 - MER5B DNA MER1_type -4 174 2 909 287 103 25 chr20 4402936 4403841 -62264164 + L1ME3 LINE L1 4931 5906 -256 2155 186 46 5 chr20 4403877 4404428 -62263577 + L1MC/D LINE L1 5156 5770 -472 311 217 0 29 chr20 4404428 4404497 -62263508 + LTR16C LTR ERVL 425 491 0 258 265 9 104 chr20 4404602 4404832 -62263173 + HAL1 LINE L1 953 1160 -1347 453 325 50 54 chr20 4404940 4405444 -62262561 - L1M4c LINE L1 -3235 3191 2690 4880 229 125 29 chr20 4405491 4406437 -62261568 + L1MD1 LINE L1 16 1155 -5385 2147 94 3 24 chr20 4406437 4406757 -62261248 + AluSq SINE Alu 2 315 0 4880 229 125 29 chr20 4406757 4407269 -62260736 + L1MD1 LINE L1 1155 1617 -4923 10768 25 0 0 chr20 4407279 4409238 -62258767 - L1PA2 LINE L1 0 6155 4196 11030 167 26 69 chr20 4409240 4412094 -62255911 + L1MD1 LINE L1 3338 6013 -623 2473 80 0 0 chr20 4412094 4412405 -62255600 + AluY SINE Alu 1 311 0 11030 167 26 69 chr20 4412405 4412988 -62255017 + L1MD1 LINE L1 6013 6619 -17 302 298 112 22 chr20 4413016 4413194 -62254811 - L1M4c LINE L1 -3959 2467 2274 443 277 162 16 chr20 4413554 4413784 -62254221 - L1M4c LINE L1 -839 1948 1481 406 145 0 0 chr20 4413888 4413950 -62254055 + L1MD2 LINE L1 6068 6129 -230 532 209 86 94 chr20 4413954 4414188 -62253817 + L2 LINE L2 3077 3308 -5 331 257 51 91 chr20 4414259 4414374 -62253631 + HAL1 LINE L1 992 1110 -1397 8067 65 31 2 chr20 4414374 4415353 -62252652 - LTR13 LTR ERVK 0 1007 1 331 257 51 91 chr20 4415353 4415490 -62252515 + HAL1 LINE L1 1110 1234 -1273 290 259 82 13 chr20 4415476 4415634 -62252371 - L1M4 LINE L1 -3126 3020 2852 * 4647 138 72 35 chr20 4416269 4416719 -62251286 - L1MA7 LINE L1 -6 6285 5853 2442 76 0 3 chr20 4416719 4417022 -62250983 - AluY SINE Alu -9 302 1 4647 138 72 35 chr20 4417022 4417463 -62250542 - L1MA7 LINE L1 -438 5853 5361 * 9107 154 43 7 chr20 4417461 4419052 -62248953 + L1 LINE L1 3656 5311 -835 207 0 0 0 chr20 4419052 4419075 -62248930 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9107 154 43 7 chr20 4419075 4419137 -62248868 + L1 LINE L1 5311 5369 -777 342 0 0 0 chr20 4419309 4419347 -62248658 + (TG)n Simple_repeat Simple_repeat 2 39 0 1649 175 51 7 chr20 4419800 4420092 -62247913 - AluJb SINE Alu -7 305 1 317 356 47 13 chr20 4420298 4420447 -62247558 + L1ME LINE L1 4673 4826 -1320 459 237 0 17 chr20 4420923 4421041 -62246964 + L1ME LINE L1 5567 5682 -439 261 163 0 0 chr20 4421063 4421112 -62246893 + (CA)n Simple_repeat Simple_repeat 2 50 0 1327 154 0 5 chr20 4421222 4421423 -62246582 + MER20 DNA MER1_type 20 219 0 222 267 0 0 chr20 4421721 4421781 -62246224 - MIR SINE MIR 0 262 203 264 228 176 29 chr20 4421891 4422027 -62245978 - L1ME4a LINE L1 -96 6025 5870 197 183 17 0 chr20 4422136 4422196 -62245809 + GA-rich Low_complexity Low_complexity 2 62 0 350 230 137 36 chr20 4422201 4422340 -62245665 + L1MC5 LINE L1 6957 7109 -852 181 229 0 42 chr20 4422376 4422424 -62245581 + L2 LINE L2 3227 3272 0 351 260 48 10 chr20 4423208 4423312 -62244693 - MIR3 SINE MIR -54 154 47 396 224 70 29 chr20 4423964 4424114 -62243891 + MIR SINE MIR 16 182 -62 26 0 0 0 chr20 4425022 4425048 -62242957 + AT_rich Low_complexity Low_complexity 1 26 0 247 325 103 0 chr20 4425096 4425213 -62242792 + MLT1J2 LTR MaLR 34 162 -288 333 265 12 12 chr20 4425244 4425327 -62242678 + MLT1I LTR MaLR 196 278 -131 243 339 42 0 chr20 4425454 4425572 -62242433 - MIR3 SINE MIR -53 155 33 245 311 56 0 chr20 4426356 4426446 -62241559 - L2 LINE L2 -18 3295 3201 1074 184 44 73 chr20 4426630 4427044 -62240961 - MLT1A1 LTR MaLR 0 396 1 293 361 28 7 chr20 4427160 4427304 -62240701 - L2 LINE L2 -507 2807 2661 454 328 31 0 chr20 4427741 4427869 -62240136 + MER91C DNA MER1_type 9 140 0 280 175 0 289 chr20 4427903 4428069 -62239936 + MER5B DNA MER1_type 59 176 -2 297 348 170 8 chr20 4428082 4428464 -62239541 + L2 LINE L2 1135 1578 -1736 591 235 184 26 chr20 4428551 4428785 -62239220 - MLT1H1 LTR MaLR 0 555 285 532 286 83 18 chr20 4428880 4429097 -62238908 - MLT1H1 LTR MaLR -244 305 75 1604 188 16 12 chr20 4429852 4430172 -62237833 + MER74C LTR ERVL 155 460 0 1117 303 85 16 chr20 4431006 4431451 -62236554 + LTR16C LTR ERVL 1 476 -15 2064 144 0 0 chr20 4431656 4431954 -62236051 - AluSx SINE Alu -14 298 1 231 114 0 0 chr20 4432484 4432519 -62235486 + (TG)n Simple_repeat Simple_repeat 2 36 0 1261 261 93 3 chr20 4432600 4432987 -62235018 - MLT2E LTR ERVL -206 422 1 307 363 109 11 chr20 4434189 4434566 -62233439 + L1ME4a LINE L1 5531 5944 -226 228 304 0 0 chr20 4434906 4434975 -62233030 + L2 LINE L2 1869 1937 -1377 1656 206 165 15 chr20 4435013 4435493 -62232512 - L1ME1 LINE L1 -34 6132 5581 2276 237 13 27 chr20 4435655 4436204 -62231801 + MER87 LTR ERV1 1 541 0 1887 199 36 117 chr20 4436508 4436896 -62231109 - MLT1E2 LTR MaLR 0 626 208 2846 62 84 77 chr20 4436896 4437350 -62230655 + L1PA7 LINE L1 5698 6154 0 1887 199 36 117 chr20 4437350 4437536 -62230469 - MLT1E2 LTR MaLR -418 208 103 962 236 56 87 chr20 4437536 4437719 -62230286 + MLT1C LTR MaLR 1 188 -279 2316 66 3 17 chr20 4437719 4438007 -62229998 + AluSp SINE Alu 30 313 0 962 236 56 87 chr20 4438007 4438305 -62229700 + MLT1C LTR MaLR 188 467 0 1887 199 36 117 chr20 4438305 4438347 -62229658 - MLT1E2 LTR MaLR -523 103 59 236 258 30 0 chr20 4438389 4438455 -62229550 - MLT1E2 LTR MaLR -434 71 4 419 281 98 38 chr20 4438458 4438693 -62229312 + L2 LINE L2 2478 2726 -588 597 300 34 39 chr20 4438693 4439122 -62228883 - MLT1J LTR MaLR 0 511 71 10539 74 21 0 chr20 4439245 4441401 -62226604 - L1PA7 LINE L1 -8 6146 3960 2201 125 10 3 chr20 4441403 4441708 -62226297 - AluSx SINE Alu -5 307 1 2000 105 3 46 chr20 4441819 4442125 -62225880 - AluSc SINE Alu -16 293 1 260 319 57 110 chr20 4442623 4442940 -62225065 + L2 LINE L2 2956 3255 -17 420 261 49 33 chr20 4443059 4443243 -62224762 + L1ME4a LINE L1 5931 6117 -4 297 75 0 0 chr20 4443283 4443323 -62224682 + (TG)n Simple_repeat Simple_repeat 1 40 0 868 200 65 28 chr20 4444141 4444356 -62223649 - MIR SINE MIR 0 262 40 567 224 133 7 chr20 4444731 4444874 -62223131 - MER5A DNA MER1_type -15 174 14 311 215 0 15 chr20 4445312 4445377 -62222628 + L2 LINE L2 3242 3305 -8 1941 146 73 6 chr20 4445498 4445841 -62222164 - L1MB5 LINE L1 -18 6156 5791 259 241 102 37 chr20 4445931 4446039 -62221966 + MER117 DNA MER1_type 81 195 -2 2461 199 0 0 chr20 4446614 4447032 -62220973 - MER47B DNA MER2_type 0 418 1 1934 151 13 10 chr20 4448052 4448187 -62219818 + AluSx SINE Alu 1 134 -178 2287 92 0 7 chr20 4448187 4448480 -62219525 + AluY SINE Alu 1 291 -20 1934 151 13 10 chr20 4448480 4448655 -62219350 + AluSx SINE Alu 134 312 0 238 309 89 16 chr20 4449064 4449187 -62218818 + MIR3 SINE MIR 12 143 -65 1260 254 40 27 chr20 4449291 4449373 -62218632 + L1MC4a LINE L1 4623 4702 -1444 1719 159 26 26 chr20 4449373 4449675 -62218330 + AluJb SINE Alu 1 302 -10 1260 254 40 27 chr20 4449675 4449948 -62218057 + L1MC4a LINE L1 4702 4986 -1160 2322 208 18 18 chr20 4449948 4450453 -62217552 + L1PA16 LINE L1 5657 6161 -5 1260 254 40 27 chr20 4450453 4450497 -62217508 + L1MC4a LINE L1 4986 5028 -1118 2342 95 7 0 chr20 4450741 4451047 -62216958 + AluSp SINE Alu 1 308 -5 2359 113 0 0 chr20 4451465 4451775 -62216230 - AluSx SINE Alu -2 310 1 234 205 145 24 chr20 4451780 4451863 -62216142 + MIR SINE MIR 61 153 -55 1760 130 23 0 chr20 4453094 4453356 -62214649 - AluSx SINE Alu -13 299 32 2379 106 3 3 chr20 4453856 4454168 -62213837 + AluSq SINE Alu 1 312 -1 184 250 0 0 chr20 4454260 4454304 -62213701 + MIR SINE MIR 61 104 -104 435 320 74 25 chr20 4454635 4454879 -62213126 + L1MC4a LINE L1 5391 5646 -2162 290 235 51 31 chr20 4454934 4455032 -62212973 + L1MC4a LINE L1 5862 5961 -1847 23 0 0 0 chr20 4455182 4455205 -62212800 + AT_rich Low_complexity Low_complexity 1 23 0 345 294 18 29 chr20 4455840 4456010 -62211995 + GA-rich Low_complexity Low_complexity 5 172 0 585 243 28 34 chr20 4457315 4457492 -62210513 + LTR16A1 LTR ERVL 282 457 0 1982 131 14 0 chr20 4457586 4457869 -62210136 - AluSx SINE Alu -25 287 1 198 254 18 0 chr20 4458453 4458508 -62209497 - L2 LINE L2 -1 3271 3216 314 318 170 35 chr20 4459361 4459854 -62208151 - L2 LINE L2 -782 2532 1942 1362 178 100 92 chr20 4459854 4460224 -62207781 + MLT1A2 LTR MaLR 1 373 -1 314 318 170 35 chr20 4460224 4460330 -62207675 - L2 LINE L2 -1372 1942 1852 1754 161 3 40 chr20 4461739 4462038 -62205967 - AluJo SINE Alu -24 288 1 276 262 159 16 chr20 4462485 4462611 -62205394 + MIR SINE MIR 2 145 -117 3686 147 2 2 chr20 4462685 4463258 -62204747 + L1PA16 LINE L1 5585 6157 -9 2242 122 3 6 chr20 4463260 4463571 -62204434 + AluSx SINE Alu 1 310 -2 1887 182 8 32 chr20 4464405 4464779 -62203226 - MLT1A1 LTR MaLR 0 365 1 207 271 0 0 chr20 4465293 4465341 -62202664 + L2 LINE L2 3217 3264 -8 1148 203 206 30 chr20 4465741 4466076 -62201929 + MSTD LTR MaLR 1 394 -2 296 209 0 0 chr20 4467331 4467398 -62200607 - L1MC1 LINE L1 -4 6329 6263 750 253 65 65 chr20 4467412 4467673 -62200332 - MER77 LTR ERV1 -291 314 54 1691 292 107 20 chr20 4468088 4469361 -62198644 + L1ME4a LINE L1 2877 4260 -1886 279 250 75 66 chr20 4469763 4469900 -62198105 + L1ME4a LINE L1 5858 5999 -122 2189 118 10 0 chr20 4469900 4470197 -62197808 + AluSx SINE Alu 5 304 -8 279 250 75 66 chr20 4470197 4470287 -62197718 + L1ME4a LINE L1 5999 6087 -34 270 224 0 0 chr20 4471576 4471625 -62196380 - MER91 DNA MER1_type -3 137 89 589 256 26 6 chr20 4472114 4472270 -62195735 - MIR SINE MIR 0 262 104 369 178 204 25 chr20 4472319 4472468 -62195537 + MLT1H LTR MaLR 53 310 -239 383 226 151 95 chr20 4472744 4473049 -62194956 - MER90 LTR ERV1 -219 356 35 274 30 0 0 chr20 4473552 4473585 -62194420 + MADE1 DNA Mariner 6 38 -42 251 266 32 21 chr20 4474319 4474413 -62193592 + HAL1b LINE L1 469 563 -785 388 85 34 0 chr20 4474419 4474478 -62193527 - MLT2C1 LTR ERVL 0 520 460 251 158 58 42 chr20 4474479 4474599 -62193406 + (TATAA)n Simple_repeat Simple_repeat 4 125 0 224 137 69 8 chr20 4474645 4474776 -62193229 + (TA)n Simple_repeat Simple_repeat 2 140 0 222 191 0 0 chr20 4474797 4474844 -62193161 + (TATG)n Simple_repeat Simple_repeat 2 48 0 1776 160 66 0 chr20 4474973 4475292 -62192713 - MLT2C1 LTR ERVL -57 340 1 1253 134 0 0 chr20 4475336 4475508 -62192497 + AluSp SINE Alu 134 305 -8 22 0 0 0 chr20 4475878 4475900 -62192105 + AT_rich Low_complexity Low_complexity 1 22 0 909 190 0 22 chr20 4476022 4476201 -62191804 + MER5B DNA MER1_type 4 178 0 214 242 0 16 chr20 4476349 4476411 -62191594 + MER5A DNA MER1_type 9 69 -120 3459 154 43 60 chr20 4476548 4477251 -62190754 + LTR8 LTR ERV1 1 691 0 322 380 68 30 chr20 4477352 4477569 -62190436 + L2 LINE L2 2850 3088 -184 5366 76 18 7 chr20 4477569 4478303 -62189702 + L1PA13 LINE L1 5419 6160 -3 322 380 68 30 chr20 4478303 4478451 -62189554 + L2 LINE L2 3088 3229 -43 1301 254 80 15 chr20 4479423 4479900 -62188105 + HAL1 LINE L1 1705 2212 -295 5357 136 12 16 chr20 4479963 4480809 -62187196 + MER4D LTR ERV1 62 903 0 377 289 122 31 chr20 4480809 4481529 -62186476 - L1M4 LINE L1 -748 5398 4613 267 165 66 11 chr20 4481559 4481650 -62186355 + (TTAAA)n Simple_repeat Simple_repeat 4 99 0 254 291 108 55 chr20 4481711 4482109 -62185896 + L1 LINE L1 2409 2827 -3319 277 296 49 0 chr20 4482154 4482235 -62185770 + MER5A DNA MER1_type 10 94 -95 928 322 61 70 chr20 4482306 4482438 -62185567 + L1 LINE L1 2932 3064 -3082 2319 75 7 0 chr20 4482438 4482764 -62185241 - AluSp SINE Alu 0 328 1 928 322 61 70 chr20 4482764 4483573 -62184432 + L1 LINE L1 3064 3868 -2278 2108 128 67 22 chr20 4483573 4483932 -62184073 + THE1C LTR MaLR 1 375 0 928 322 61 70 chr20 4483932 4483992 -62184013 + L1 LINE L1 3868 3927 -2219 408 334 52 30 chr20 4484032 4484436 -62183569 + L1 LINE L1 4067 4479 -1667 882 283 111 24 chr20 4484519 4484943 -62183062 + MLT1L LTR MaLR 155 615 0 351 269 155 56 chr20 4485269 4485715 -62182290 - L1M4 LINE L1 -2919 3227 2738 1432 286 46 21 chr20 4486465 4486941 -62181064 + LTR16C LTR ERVL 4 491 0 180 364 81 62 chr20 4487449 4487658 -62180347 + L2 LINE L2 3030 3242 -30 1144 240 86 26 chr20 4488079 4488923 -62179082 + L1MEc LINE L1 1951 2896 -3319 272 293 55 67 chr20 4491347 4491615 -62176390 + MIR3 SINE MIR 3 259 -3 228 259 129 24 chr20 4492676 4492761 -62175244 + L2 LINE L2 2885 2978 -294 189 289 0 0 chr20 4492868 4492920 -62175085 - L3b LINE CR1 -3 1580 1529 360 0 0 0 chr20 4493080 4493120 -62174885 + (CA)n Simple_repeat Simple_repeat 2 41 0 1170 151 16 0 chr20 4494247 4494433 -62173572 + AluSg/x SINE Alu 104 292 -20 818 179 68 6 chr20 4494500 4494662 -62173343 - LTR37B LTR ERV1 -289 179 8 506 317 85 55 chr20 4495260 4495717 -62172288 + L2 LINE L2 2817 3287 -26 184 297 0 68 chr20 4495870 4495944 -62172061 + L2 LINE L2 3204 3272 0 193 204 250 0 chr20 4496166 4496254 -62171751 + MIR3 SINE MIR 3 112 -96 5976 60 23 4 chr20 4496452 4497204 -62170801 - MER4E LTR ERV1 0 766 1 1827 147 18 0 chr20 4497288 4497574 -62170431 - AluJo SINE Alu -21 291 1 22 0 0 0 chr20 4497597 4497619 -62170386 + AT_rich Low_complexity Low_complexity 1 22 0 789 72 0 0 chr20 4497619 4497716 -62170289 - L1PA6 LINE L1 -7 6147 6051 5094 174 38 35 chr20 4498469 4499645 -62168360 + L1MA9 LINE L1 5127 6312 0 22 56 0 0 chr20 4499771 4499807 -62168198 + AT_rich Low_complexity Low_complexity 1 36 0 208 250 19 0 chr20 4500017 4500069 -62167936 + (TG)n Simple_repeat Simple_repeat 2 54 0 584 274 150 0 chr20 4500867 4501020 -62166985 - MER5A DNA MER1_type 0 189 14 255 303 68 68 chr20 4501363 4501525 -62166480 + MIR SINE MIR 31 192 -70 280 252 0 103 chr20 4501956 4502063 -62165942 + MER117 DNA MER1_type 2 97 -100 189 188 0 83 chr20 4502365 4502413 -62165592 - L2 LINE L2 -18 3295 3252 417 109 0 0 chr20 4502874 4502938 -62165067 + (T)n Simple_repeat Simple_repeat 1 64 0 240 335 36 85 chr20 4503367 4503839 -62164166 + L2 LINE L2 2817 3265 -7 1699 251 97 40 chr20 4503891 4504573 -62163432 - MER21B LTR ERV1 -130 733 13 729 252 34 101 chr20 4504653 4505097 -62162908 + L1ME4a LINE L1 5491 5904 -217 329 193 165 0 chr20 4505101 4505210 -62162795 + L1ME4a LINE L1 5993 6119 -2 3503 211 62 16 chr20 4505966 4506820 -62161185 + MER97a DNA MER1_type 2 894 0 378 279 93 31 chr20 4507005 4507166 -62160839 + MIR SINE MIR 16 186 -76 390 326 31 0 chr20 4507915 4508044 -62159961 - MER94 DNA DNA -1 133 1 2115 113 3 35 chr20 4508140 4508450 -62159555 + AluSx SINE Alu 1 300 -12 322 304 45 0 chr20 4509073 4509185 -62158820 - MER103 DNA DNA -47 119 3 558 229 16 100 chr20 4510225 4510349 -62157656 - MLT1H LTR MaLR -25 406 273 243 0 0 0 chr20 4510349 4510376 -62157629 + (CTGGGG)n Simple_repeat Simple_repeat 3 29 0 558 229 16 100 chr20 4510376 4510674 -62157331 - MLT1H LTR MaLR -158 273 1 1149 203 0 5 chr20 4512277 4512484 -62155521 + MER3 DNA MER1_type 2 207 -2 1543 231 73 86 chr20 4513787 4514386 -62153619 - MER77 LTR ERV1 -1 604 41 365 314 123 8 chr20 4514391 4514643 -62153362 + L1ME3 LINE L1 4960 5240 -906 236 186 23 0 chr20 4514732 4514775 -62153230 + L1P5 LINE L1 5529 5572 -584 379 316 204 16 chr20 4514845 4515149 -62152856 + L1MC4a LINE L1 5626 5986 -1822 1707 291 53 17 chr20 4515323 4515924 -62152081 + MLT2E LTR ERVL 6 628 0 231 158 50 0 chr20 4515940 4516053 -62151952 + (TA)n Simple_repeat Simple_repeat 2 123 -4 186 71 0 0 chr20 4516053 4516081 -62151924 + (TG)n Simple_repeat Simple_repeat 1 28 0 231 158 50 0 chr20 4516081 4516087 -62151918 + (TA)n Simple_repeat Simple_repeat 123 127 0 39598 81 6 8 chr20 4516555 4522706 -62145299 - L1PA6 LINE L1 -3 6151 11 302 246 220 34 chr20 4522728 4522846 -62145159 - MIR SINE MIR -70 192 53 314 267 75 54 chr20 4523102 4523350 -62144655 - MLT1H LTR MaLR -137 272 19 2202 241 72 16 chr20 4523517 4524073 -62143932 - MLT1G1 LTR MaLR -8 587 1 469 266 83 52 chr20 4524442 4524634 -62143371 - MIR SINE MIR -6 256 59 723 210 14 0 chr20 4525041 4525179 -62142826 + MER5B DNA MER1_type 39 178 0 314 201 93 50 chr20 4525321 4525460 -62142545 + L2 LINE L2 3076 3220 -93 287 297 54 0 chr20 4525462 4525536 -62142469 - MER91C DNA MER1_type -32 108 31 437 283 38 0 chr20 4525542 4525648 -62142357 + L2 LINE L2 3203 3312 -1 336 119 0 0 chr20 4525733 4525792 -62142213 + (CAT)n Simple_repeat Simple_repeat 3 61 0 291 309 12 12 chr20 4525929 4526010 -62141995 + MIR SINE MIR 29 109 -153 325 173 58 10 chr20 4526075 4526173 -62141832 + L1ME3 LINE L1 5367 5478 -722 802 271 123 17 chr20 4526176 4526609 -62141396 - MLT1J2 LTR MaLR 0 450 1 421 338 82 17 chr20 4526610 4527027 -62140978 + L1ME3 LINE L1 5486 5929 -233 201 231 0 0 chr20 4527129 4527168 -62140837 + GA-rich Low_complexity Low_complexity 3 41 0 2897 179 9 38 chr20 4527240 4527820 -62140185 + L1MB4 LINE L1 5618 6180 0 429 253 126 44 chr20 4528846 4529028 -62138977 + MIR SINE MIR 63 259 -3 1965 208 177 31 chr20 4529193 4529809 -62138196 - MER21B LTR ERV1 -124 739 34 197 284 45 15 chr20 4529945 4530012 -62137993 + MIR3 SINE MIR 114 182 -26 2872 198 109 28 chr20 4530178 4530967 -62137038 - L1ME3 LINE L1 0 6162 5310 210 302 0 31 chr20 4531007 4531103 -62136902 - MIR SINE MIR -70 192 100 1764 236 106 6 chr20 4531907 4532468 -62135537 - L1ME3 LINE L1 -80 6082 5468 310 229 51 76 chr20 4533065 4533183 -62134822 + L2 LINE L2 3158 3272 0 296 265 102 65 chr20 4533389 4533634 -62134371 + L2 LINE L2 2288 2541 -773 230 343 0 0 chr20 4533610 4533680 -62134325 - L2 LINE L2 0 3313 3244 * 205 314 0 0 chr20 4534568 4534619 -62133386 + polypyrimidine Low_complexity Low_complexity 1 51 0 467 255 113 14 chr20 4535745 4535886 -62132119 - MIR SINE MIR -103 159 5 283 219 135 0 chr20 4535918 4536014 -62131991 + MIR SINE MIR 146 254 -8 180 182 0 0 chr20 4536055 4536099 -62131906 + GA-rich Low_complexity Low_complexity 3 46 0 1947 148 3 16 chr20 4536948 4537253 -62130752 - AluJb SINE Alu -11 301 1 407 200 200 21 chr20 4537399 4537539 -62130466 - MIR SINE MIR -14 248 84 2475 74 0 0 chr20 4538433 4538732 -62129273 - AluSg SINE Alu -11 299 1 510 230 146 6 chr20 4538732 4538910 -62129095 - Charlie4a DNA MER1_type -8 500 298 752 242 204 4 chr20 4538910 4539179 -62128826 - MER5C DNA MER1_type 0 324 2 899 231 60 40 chr20 4539181 4539479 -62128526 - Charlie4a DNA MER1_type -204 304 1 270 336 92 0 chr20 4539939 4540058 -62127947 - MIR SINE MIR -15 247 118 2580 228 3 17 chr20 4541194 4541897 -62126108 + L1MB5 LINE L1 4068 4760 -1386 3733 175 64 41 chr20 4541922 4543429 -62124576 + MER52A LTR ERV1 1 1755 0 1810 198 18 11 chr20 4543429 4543878 -62124127 + L1MB5 LINE L1 4773 5224 -922 277 40 60 20 chr20 4543878 4543928 -62124077 + T-rich Low_complexity Low_complexity 1 52 0 2569 43 0 0 chr20 4543928 4544253 -62123752 - L1PA4 LINE L1 -24 6131 5807 2970 205 28 2 chr20 4544256 4545154 -62122851 + L1MB5 LINE L1 5219 6166 -8 745 239 72 5 chr20 4545260 4545469 -62122536 - Charlie4 DNA MER1_type -1666 295 73 1060 228 9 9 chr20 4545617 4545841 -62122164 + MER58A DNA MER1_type 1 224 0 25 0 0 0 chr20 4546005 4546030 -62121975 + AT_rich Low_complexity Low_complexity 1 25 0 273 324 30 0 chr20 4546047 4546182 -62121823 + L1MDa LINE L1 34 618 -5912 913 235 71 45 chr20 4546407 4546437 -62121568 - MLT2B3 LTR ERVL -10 544 516 531 0 0 0 chr20 4546437 4546496 -62121509 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 913 235 71 45 chr20 4546496 4546733 -62121272 - MLT2B3 LTR ERVL -38 516 270 546 235 38 0 chr20 4546885 4547017 -62120988 + MLT1A2 LTR MaLR 238 374 0 2543 243 41 28 chr20 4547017 4547818 -62120187 + L1ME1 LINE L1 5338 6149 -17 1779 214 31 31 chr20 4547855 4548309 -62119696 + L1MA9 LINE L1 8 461 -6569 2444 219 5 21 chr20 4548357 4549013 -62118992 + L1MA9 LINE L1 1829 2473 -4564 * 8876 172 72 32 chr20 4549004 4551612 -62116393 + L1MA9 LINE L1 4075 6801 -471 465 66 0 0 chr20 4551612 4551673 -62116332 + (CA)n Simple_repeat Simple_repeat 1 61 0 8876 172 72 32 chr20 4551673 4552150 -62115855 + L1MA9 LINE L1 6801 7258 -14 2007 120 29 0 chr20 4552272 4552581 -62115424 + AluSx SINE Alu 1 317 0 226 366 114 13 chr20 4552716 4552943 -62115062 + L2 LINE L2 2804 3053 -219 3022 92 2 31 chr20 4553479 4553935 -62114070 + L1PA13 LINE L1 5702 6144 -19 277 345 45 0 chr20 4553944 4554054 -62113951 - MIR SINE MIR -57 151 37 193 150 0 50 chr20 4554068 4554128 -62113877 + (TTTC)n Simple_repeat Simple_repeat 3 59 0 257 320 87 0 chr20 4554939 4555042 -62112963 - MIR SINE MIR -32 230 119 2274 190 66 34 chr20 4555073 4555525 -62112480 - L1MB7 LINE L1 -277 5907 5471 1888 181 3 0 chr20 4555525 4555823 -62112182 - AluJo SINE Alu -13 299 1 2274 190 66 34 chr20 4555823 4555949 -62112056 - L1MB7 LINE L1 -713 5471 5351 2157 112 7 0 chr20 4555949 4556244 -62111761 - AluSx SINE Alu -15 297 1 2274 190 66 34 chr20 4556244 4556334 -62111671 - L1MB7 LINE L1 -833 5351 5207 862 196 61 17 chr20 4556331 4556561 -62111444 + L1MB7 LINE L1 5940 6179 -5 * 27 0 0 0 chr20 4556801 4556828 -62111177 + AT_rich Low_complexity Low_complexity 1 27 0 8644 168 19 23 chr20 4556835 4559036 -62108969 + L1MA9 LINE L1 3471 5680 -632 2257 110 0 0 chr20 4559036 4559336 -62108669 + AluSx SINE Alu 1 300 -12 2212 131 0 0 chr20 4559336 4559648 -62108357 + AluSx SINE Alu 1 312 0 8644 168 19 23 chr20 4559648 4560048 -62107957 + L1MA9 LINE L1 5678 6064 -248 264 105 0 0 chr20 4560048 4560086 -62107919 + LTR16C LTR ERVL 454 491 0 250 255 51 31 chr20 4560894 4560992 -62107013 - LTR67 LTR ERVL -47 510 411 1118 288 33 40 chr20 4561517 4561940 -62106065 + LTR16C LTR ERVL 51 470 -21 514 269 35 46 chr20 4562213 4562410 -62105595 - ERVL LTR ERVL -1106 4658 4464 1144 344 44 24 chr20 4562790 4563659 -62104346 - ERVL LTR ERVL -1716 3938 3053 24 53 0 0 chr20 4563827 4563865 -62104140 + AT_rich Low_complexity Low_complexity 1 38 0 447 244 23 54 chr20 4564009 4564230 -62103775 - L1M4 LINE L1 -2593 3553 3340 4312 166 35 14 chr20 4564231 4564399 -62103606 - L1MA10 LINE L1 -2 6332 6169 315 0 0 0 chr20 4564399 4564434 -62103571 + (TG)n Simple_repeat Simple_repeat 1 35 0 4312 166 35 14 chr20 4564434 4565123 -62102882 - L1MA10 LINE L1 -165 6169 5457 6215 211 18 9 chr20 4565123 4566492 -62101513 - L1MA10 LINE L1 -2106 4040 2655 1499 104 45 0 chr20 4566492 4566712 -62101293 + MER30 DNA MER1_type 1 230 0 6215 211 18 9 chr20 4566712 4566809 -62101196 - L1MA10 LINE L1 -3491 2655 2560 1496 221 63 49 chr20 4566816 4567031 -62100974 - MER74A LTR ERVL 0 558 348 420 97 0 0 chr20 4567031 4567093 -62100912 + (TG)n Simple_repeat Simple_repeat 1 62 0 1496 221 63 49 chr20 4567093 4567371 -62100634 - MER74A LTR ERVL -210 348 58 345 198 99 12 chr20 4567387 4567468 -62100537 - MER74A LTR ERVL -470 88 1 265 216 9 54 chr20 4567498 4567609 -62100396 - L1M4 LINE L1 -2846 3300 3195 483 270 69 29 chr20 4567864 4568038 -62099967 + MER5A DNA MER1_type 6 186 -3 624 275 11 11 chr20 4569156 4569334 -62098671 - MIR SINE MIR 0 262 85 1823 231 59 12 chr20 4569334 4569840 -62098165 - MLT1H LTR MaLR 0 549 20 216 0 0 0 chr20 4569843 4569867 -62098138 + (T)n Simple_repeat Simple_repeat 1 24 0 351 366 0 8 chr20 4570826 4570957 -62097048 + MIR3 SINE MIR 64 193 -15 447 218 0 0 chr20 4570957 4571058 -62096947 + CT-rich Low_complexity Low_complexity 1 101 0 1155 81 0 27 chr20 4571058 4571243 -62096762 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1361 159 0 17 chr20 4571292 4571524 -62096481 - AluJb SINE Alu -83 229 2 338 197 26 0 chr20 4571867 4571943 -62096062 + Charlie2 DNA MER1_type 67 144 -2718 21 89 0 0 chr20 4572023 4572079 -62095926 + AT_rich Low_complexity Low_complexity 1 56 0 444 280 188 14 chr20 4572093 4572375 -62095630 + Charlie2 DNA MER1_type 251 581 -2201 359 337 88 0 chr20 4572377 4572558 -62095447 + Charlie2b DNA MER1_type 474 670 -2112 4202 202 53 31 chr20 4572627 4573951 -62094054 + Charlie2a DNA MER1_type 1466 2818 -44 433 291 9 1 chr20 4575369 4575496 -62092509 + MIR SINE MIR 31 157 -69 573 269 164 39 chr20 4577096 4577590 -62090415 + L1MC/D LINE L1 2687 3242 -2904 338 225 11 56 chr20 4577677 4577766 -62090239 + MLT1J LTR MaLR 104 188 -323 262 273 31 37 chr20 4577772 4577933 -62090072 + L1MC/D LINE L1 5327 5486 -2322 632 262 61 0 chr20 4577940 4578104 -62089901 - MIR SINE MIR 0 262 89 472 306 86 4 chr20 4578107 4578339 -62089666 + L1MC/D LINE L1 5487 5737 -2071 5604 206 52 11 chr20 4578459 4580884 -62087121 + L1MC3 LINE L1 4024 5403 -743 339 46 11 218 chr20 4580909 4580970 -62087035 + L1MC3 LINE L1 6882 6922 -863 3803 169 35 3 chr20 4580970 4581686 -62086319 - L1MD1 LINE L1 0 6242 5504 339 46 11 218 chr20 4581686 4581711 -62086294 + L1MC3 LINE L1 6922 6950 -835 341 307 24 0 chr20 4581716 4581843 -62086162 - LTR33 LTR ERVL -391 130 1 1345 255 67 80 chr20 4582272 4582958 -62085047 - MER21B LTR ERV1 -150 713 35 268 270 119 16 chr20 4584407 4584533 -62083472 - L2 LINE L2 0 3272 3134 629 239 103 97 chr20 4585005 4585344 -62082661 - MLT1H LTR MaLR 0 549 209 1500 254 17 0 chr20 4585347 4585702 -62082303 + MLT1E2-int LTR MaLR 246 606 -765 928 233 35 170 chr20 4585935 4586601 -62081404 + MLT1E2-int LTR MaLR 692 1267 -104 690 167 25 0 chr20 4586617 4586737 -62081268 - L1MB1 LINE L1 0 6168 6046 3431 150 43 29 chr20 4586737 4586872 -62081133 + L1MB1 LINE L1 5352 5484 -684 2186 118 0 16 chr20 4586872 4587176 -62080829 + AluSx SINE Alu 1 299 -13 3431 150 43 29 chr20 4587176 4587695 -62080310 + L1MB1 LINE L1 5484 6015 -153 486 236 49 0 chr20 4587700 4587823 -62080182 + MLT1E2-int LTR MaLR 1243 1371 0 2228 210 87 19 chr20 4587905 4588444 -62079561 + MLT1E2 LTR MaLR 51 626 0 717 182 135 0 chr20 4588444 4588592 -62079413 - MLT1H LTR MaLR -341 208 41 2019 165 91 10 chr20 4589795 4590189 -62077816 - MSTB LTR MaLR 0 426 1 1248 117 12 0 chr20 4591112 4591283 -62076722 - AluSg/x SINE Alu -16 296 124 243 237 92 13 chr20 4591339 4591415 -62076590 - MLT1H LTR MaLR -15 580 499 * 584 279 49 102 chr20 4591411 4591714 -62076291 - MLT1H LTR MaLR -195 354 70 2457 177 19 2 chr20 4591714 4592133 -62075872 - MSTB LTR MaLR 0 426 1 584 279 49 102 chr20 4592133 4592173 -62075832 - MLT1H LTR MaLR -479 70 29 276 312 85 38 chr20 4592222 4592541 -62075464 - L2 LINE L2 -251 3062 2719 604 314 108 23 chr20 4592556 4592983 -62075022 - MLT1L LTR MaLR -14 601 139 403 237 69 15 chr20 4593081 4593212 -62074793 - MLT1L LTR MaLR -410 139 2 183 100 0 0 chr20 4593240 4593270 -62074735 + (CA)n Simple_repeat Simple_repeat 2 31 0 1198 283 57 31 chr20 4593364 4593680 -62074325 - MLT1D LTR MaLR 0 505 170 1305 118 62 153 chr20 4593680 4594019 -62073986 - AluYb8 SINE Alu 0 308 1 1198 283 57 31 chr20 4594019 4594190 -62073815 - MLT1D LTR MaLR -335 170 5 199 348 61 17 chr20 4595202 4595317 -62072688 + MIR SINE MIR 34 153 -55 842 243 82 12 chr20 4595326 4595569 -62072436 + Charlie4a DNA MER1_type 4 263 -245 750 150 50 0 chr20 4595577 4595697 -62072308 + FLAM_C SINE Alu 2 127 -16 437 233 61 22 chr20 4595714 4595894 -62072111 + Charlie4a DNA MER1_type 253 439 -69 2294 120 0 0 chr20 4595941 4596250 -62071755 + AluSx SINE Alu 1 309 -3 311 275 44 9 chr20 4596333 4596448 -62071557 - MIR SINE MIR -87 121 2 679 261 124 0 chr20 4596476 4596710 -62071295 + L2 LINE L2 1441 1703 -1611 1674 206 102 80 chr20 4596715 4597184 -62070821 - MLT1F LTR MaLR -2 540 56 2262 119 51 20 chr20 4597184 4597537 -62070468 + THE1B LTR MaLR 1 364 0 1674 206 102 80 chr20 4597537 4597595 -62070410 - MLT1F LTR MaLR -486 56 1 1239 248 65 3 chr20 4597595 4597934 -62070071 + L2 LINE L2 1708 2067 -1247 282 283 91 36 chr20 4597994 4598213 -62069792 + HAL1 LINE L1 2014 2244 -263 416 194 32 0 chr20 4598228 4598321 -62069684 + HAL1 LINE L1 2296 2391 -116 747 277 130 36 chr20 4598843 4599713 -62068292 + L1MEc LINE L1 805 1651 -4564 567 108 0 0 chr20 4600935 4601028 -62066977 + (TTCC)n Simple_repeat Simple_repeat 2 94 0 2097 127 0 10 chr20 4601028 4601328 -62066677 - AluSx SINE Alu -15 297 1 2390 99 0 0 chr20 4601483 4601777 -62066228 + AluY SINE Alu 1 294 -17 286 252 153 0 chr20 4602421 4602552 -62065453 - L2 LINE L2 -2 3311 3161 363 305 163 17 chr20 4602816 4603049 -62064956 + LTR16C LTR ERVL 223 489 -2 585 355 59 20 chr20 4603114 4603167 -62064838 - L2 LINE L2 -199 3073 3024 2284 112 0 0 chr20 4603167 4603472 -62064533 + AluSx SINE Alu 1 305 -7 585 355 59 20 chr20 4603472 4603985 -62064020 - L2 LINE L2 -248 3024 2490 231 218 0 0 chr20 4604260 4604315 -62063690 + (ATG)n Simple_repeat Simple_repeat 2 56 0 2016 93 0 35 chr20 4604425 4604728 -62063277 + L1PA13 LINE L1 5862 6155 -8 2221 116 0 0 chr20 4604728 4605022 -62062983 - AluSx SINE Alu -18 294 1 206 301 19 78 chr20 4605074 4605177 -62062828 - L2 LINE L2 -621 2693 2597 888 267 94 1 chr20 4605183 4605607 -62062398 + LTR16C LTR ERVL 1 491 0 2348 194 67 9 chr20 4605935 4606471 -62061534 - MLT1F1 LTR MaLR 0 567 1 678 190 0 0 chr20 4606555 4606671 -62061334 + FRAM SINE Alu 41 156 -20 416 180 0 11 chr20 4606676 4606765 -62061240 + GA-rich Low_complexity Low_complexity 2 89 0 23 0 0 0 chr20 4607207 4607230 -62060775 + AT_rich Low_complexity Low_complexity 1 23 0 1481 240 63 30 chr20 4608209 4608531 -62059474 + Charlie4a DNA MER1_type 2 347 -1614 2155 116 0 14 chr20 4608531 4608825 -62059180 - AluSx SINE Alu -22 290 1 1481 240 63 30 chr20 4608825 4608993 -62059012 + Charlie4a DNA MER1_type 347 508 0 340 302 98 33 chr20 4609419 4609553 -62058452 - L1ME4a LINE L1 -161 5960 5836 2321 65 27 14 chr20 4609553 4609846 -62058159 + AluY SINE Alu 1 297 -14 340 302 98 33 chr20 4609846 4609956 -62058049 - L1ME4a LINE L1 -285 5836 5700 2296 117 0 0 chr20 4609956 4610254 -62057751 + AluSx SINE Alu 1 298 -14 252 232 87 0 chr20 4610296 4610365 -62057640 - MER116 DNA Mariner 0 80 6 338 310 86 76 chr20 4610382 4611082 -62056923 - L1ME4a LINE L1 -1316 4830 4124 1854 161 22 12 chr20 4611151 4611475 -62056530 + MLT1A1 LTR MaLR 39 365 0 22 35 0 0 chr20 4611684 4611713 -62056292 + AT_rich Low_complexity Low_complexity 1 29 0 305 265 68 0 chr20 4613918 4614035 -62053970 + MIR SINE MIR 100 224 -38 252 290 21 21 chr20 4614104 4614197 -62053808 + LTR16C LTR ERVL 79 171 -320 258 154 0 58 chr20 4614219 4614271 -62053734 - MLT2B1 LTR ERVL -8 512 464 249 246 0 0 chr20 4614273 4614338 -62053667 + (TATG)n Simple_repeat Simple_repeat 4 68 0 1339 206 148 35 chr20 4614344 4614775 -62053230 - MLT2B1 LTR ERVL -40 480 1 265 309 36 0 chr20 4614844 4614954 -62053051 + LTR16C LTR ERVL 349 462 -29 375 271 19 94 chr20 4616375 4616460 -62051545 - L1ME3A LINE L1 -234 5936 5846 2267 92 0 17 chr20 4616460 4616755 -62051250 - AluSx SINE Alu -20 292 3 375 271 19 94 chr20 4616755 4616935 -62051070 - L1ME3A LINE L1 -324 5846 5691 24 0 0 0 chr20 4617084 4617108 -62050897 + AT_rich Low_complexity Low_complexity 1 24 0 292 267 37 84 chr20 4617310 4617501 -62050504 - L1ME4a LINE L1 -3289 2857 2676 5392 119 19 57 chr20 4617507 4618582 -62049423 + L1PA12 LINE L1 5130 6168 0 181 163 41 0 chr20 4618616 4618665 -62049340 + CT-rich Low_complexity Low_complexity 2 52 0 2195 121 16 0 chr20 4618791 4619098 -62048907 - AluSx SINE Alu 0 312 1 370 340 111 17 chr20 4619145 4619442 -62048563 - L1ME4a LINE L1 -3600 2546 2222 5777 63 7 0 chr20 4619676 4620391 -62047614 - L1PA8 LINE L1 -1 6171 5452 267 182 105 127 chr20 4620785 4620966 -62047039 + MER104 DNA Tc2 1 177 -3 535 283 93 20 chr20 4621017 4621411 -62046594 - L1MDa LINE L1 -742 2159 1636 2220 115 7 0 chr20 4621621 4621916 -62046089 - AluSx SINE Alu -15 297 1 1172 188 43 59 chr20 4623505 4623808 -62044197 + AluJo SINE Alu 1 298 -4 276 119 0 0 chr20 4624973 4625015 -62042990 - AluJo SINE Alu -11 291 250 1215 185 4 89 chr20 4625035 4625316 -62042689 - AluJo SINE Alu -53 259 3 256 312 102 62 chr20 4625519 4625970 -62042035 - L1M4 LINE L1 -1003 5143 4712 1176 142 49 0 chr20 4625970 4626175 -62041830 - L1MA7 LINE L1 0 6291 6077 256 312 102 62 chr20 4626175 4626796 -62041209 - L1M4 LINE L1 -1434 4712 4027 824 176 149 5 chr20 4626925 4627113 -62040892 - AluJo SINE Alu -11 301 87 231 321 149 15 chr20 4627208 4627342 -62040663 + MIR SINE MIR 105 256 -6 2225 105 0 0 chr20 4627369 4627698 -62040307 - AluSq SINE Alu 0 329 1 447 104 15 0 chr20 4627740 4627807 -62040198 - MER41A LTR ERV1 -88 466 399 22 70 0 0 chr20 4627903 4627946 -62040059 + AT_rich Low_complexity Low_complexity 1 43 0 1455 101 22 40 chr20 4628324 4628552 -62039453 + AluSx SINE Alu 2 225 -87 689 229 108 54 chr20 4628635 4628932 -62039073 + L2 LINE L2 2995 3307 -6 351 213 0 0 chr20 4629194 4629274 -62038731 + (CA)n Simple_repeat Simple_repeat 1 80 0 637 235 117 5 chr20 4629490 4629703 -62038302 - MER115 DNA AcHobo 0 693 457 754 274 36 15 chr20 4629752 4630026 -62037979 - MER115 DNA AcHobo -322 371 92 699 156 0 0 chr20 4630641 4630750 -62037255 + L1MB5 LINE L1 6065 6173 -1 2234 132 3 0 chr20 4630758 4631068 -62036937 + AluSx SINE Alu 1 311 -1 1133 68 28 6 chr20 4631101 4631277 -62036728 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 211 122 24 0 chr20 4632283 4632324 -62035681 - L2 LINE L2 -556 2758 2717 846 228 53 0 chr20 4632336 4632542 -62035463 + MIR SINE MIR 12 228 -34 225 167 39 26 chr20 4633091 4633169 -62034836 + GA-rich Low_complexity Low_complexity 1 79 0 792 263 24 0 chr20 4633187 4633400 -62034605 + MIR SINE MIR 12 229 -33 2155 77 7 28 chr20 4633706 4633993 -62034012 + AluSx SINE Alu 1 281 -31 450 0 0 0 chr20 4633998 4634048 -62033957 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 271 32 0 0 chr20 4634646 4634677 -62033328 - L1M2 LINE L1 -404 5887 5857 278 149 0 0 chr20 4634678 4634725 -62033280 + L1MA7 LINE L1 6239 6285 -6 180 0 0 0 chr20 4634725 4634745 -62033260 + (CCA)n Simple_repeat Simple_repeat 3 22 0 203 255 0 0 chr20 4635539 4635586 -62032419 + L2 LINE L2 3252 3298 -15 431 192 35 17 chr20 4635987 4636096 -62031909 - MLT1C LTR MaLR -337 130 18 1064 210 70 18 chr20 4636498 4636726 -62031279 - MLT1C LTR MaLR 0 467 228 2934 133 13 49 chr20 4636726 4637044 -62030961 - MER39B LTR ERV1 0 653 360 2781 91 3 5 chr20 4637044 4637417 -62030588 - THE1C LTR MaLR 0 375 4 2934 133 13 49 chr20 4637417 4637631 -62030374 - MER39B LTR ERV1 -293 360 140 1053 166 29 46 chr20 4637669 4637910 -62030095 - MLT1C LTR MaLR -230 237 1 829 254 57 32 chr20 4638032 4638347 -62029658 + L1MDa LINE L1 18 340 -6200 687 233 17 80 chr20 4638475 4638696 -62029309 + L1MDa LINE L1 843 1043 -5500 2085 122 3 25 chr20 4638696 4639016 -62028989 + AluSq SINE Alu 1 313 0 687 233 17 80 chr20 4639016 4639082 -62028923 + L1MDa LINE L1 1043 1112 -5431 1051 151 32 21 chr20 4639083 4639269 -62028736 - MER21B LTR ERV1 -14 849 662 2651 110 75 54 chr20 4639269 4639752 -62028253 - LTR26B LTR ERV1 -1 530 38 33065 103 15 60 chr20 4639769 4643826 -62024179 - L1PA7 LINE L1 0 6154 2498 2549 64 0 10 chr20 4643826 4644137 -62023868 - AluY SINE Alu -3 308 1 33065 103 15 60 chr20 4644137 4646519 -62021486 - L1PA7 LINE L1 -3656 2498 12 477 114 0 14 chr20 4646539 4646609 -62021396 - LTR26E LTR ERV1 -553 69 1 * 2484 216 68 22 chr20 4646609 4647154 -62020851 - MER21B LTR ERV1 -197 666 97 284 198 119 89 chr20 4647264 4647365 -62020640 - MER21B LTR ERV1 -758 105 2 3535 210 94 66 chr20 4647380 4647709 -62020296 + L1MDa LINE L1 1259 1577 -4963 1902 169 0 3 chr20 4647709 4648022 -62019983 + AluJb SINE Alu 1 312 0 3535 210 94 66 chr20 4648022 4648040 -62019965 + L1MDa LINE L1 1577 1593 -4947 2410 97 3 0 chr20 4648040 4648349 -62019656 + AluSx SINE Alu 1 310 -2 3535 210 94 66 chr20 4648349 4649291 -62018714 + L1MDa LINE L1 1593 2586 -3954 1327 127 131 23 chr20 4649279 4649538 -62018467 + L1MA6 LINE L1 6014 6300 0 * 1470 232 36 27 chr20 4649509 4649953 -62018052 + L1MDa LINE L1 2539 2986 -3554 818 164 0 8 chr20 4649960 4650088 -62017917 + AluJo SINE Alu 1 127 -185 1233 138 0 0 chr20 4651004 4651178 -62016827 + AluJo SINE Alu 129 302 -10 582 238 67 0 chr20 4651179 4651343 -62016662 + L1MDa LINE L1 2987 3161 -3379 8252 114 10 5 chr20 4652411 4653642 -62014363 + THE1C-int LTR MaLR 312 1580 0 2177 116 3 42 chr20 4653642 4653977 -62014028 + THE1C LTR MaLR 1 322 -53 2846 154 11 50 chr20 4653989 4654534 -62013471 + LTR26B LTR ERV1 1 524 -7 2691 126 20 0 chr20 4654610 4655006 -62012999 - LTR26 LTR ERV1 -199 404 1 223 318 119 13 chr20 4655114 4655350 -62012655 + L2 LINE L2 1565 1825 -1489 659 277 98 40 chr20 4655786 4656579 -62011426 + L2 LINE L2 2467 3309 -4 571 206 198 71 chr20 4656658 4657022 -62010983 + LTR16A1 LTR ERVL 11 420 -37 1636 176 10 30 chr20 4657027 4657328 -62010677 + AluJo SINE Alu 5 299 -13 248 233 14 0 chr20 4657351 4657424 -62010581 + GA-rich Low_complexity Low_complexity 3 76 0 232 214 36 0 chr20 4657640 4657696 -62010309 + GA-rich Low_complexity Low_complexity 1 58 0 1982 126 0 0 chr20 4658623 4658892 -62009113 - AluSx SINE Alu -43 269 1 1963 156 17 0 chr20 4659789 4660084 -62007921 + AluSx SINE Alu 3 302 -10 824 207 0 0 chr20 4660088 4660233 -62007772 - FRAM SINE Alu -30 146 2 1296 177 5 5 chr20 4660512 4660727 -62007278 + AluJo SINE Alu 84 298 -14 2046 187 58 85 chr20 4660727 4660899 -62007106 - MER92B LTR ERV1 -52 584 409 2233 116 0 19 chr20 4660899 4661217 -62006788 + AluSx SINE Alu 1 312 0 2046 187 58 85 chr20 4661217 4661474 -62006531 - MER92B LTR ERV1 -227 409 173 1977 139 39 18 chr20 4661474 4661804 -62006201 + MER1B DNA MER1_type 1 337 0 2046 187 58 85 chr20 4661804 4661973 -62006032 - MER92B LTR ERV1 -463 173 1 1413 268 48 21 chr20 4662363 4662974 -62005031 + L1M3d LINE L1 4 909 -4982 11023 130 7 13 chr20 4662975 4664654 -62003351 + Tigger1 DNA MER2_type 1 1669 -749 2362 126 59 45 chr20 4664656 4665078 -62002927 - MSTA LTR MaLR 0 428 1 1602 88 4 18 chr20 4665078 4665304 -62002701 - MSTA-int LTR MaLR 0 1580 1358 742 80 143 2 chr20 4665304 4665416 -62002589 - THE1B LTR MaLR -247 117 3 7097 151 17 12 chr20 4665418 4666565 -62001440 - THE1B-int LTR MaLR -1 1579 427 1096 156 0 0 chr20 4666571 4666738 -62001267 + AluSc SINE Alu 141 307 -2 658 138 0 0 chr20 4666738 4666832 -62001173 + Tigger1 DNA MER2_type 1739 1832 -586 531 158 0 0 chr20 4666857 4666939 -62001066 - Tigger5 DNA MER2_type -1 2322 2241 233 209 23 0 chr20 4666954 4666997 -62001008 + Tigger5 DNA MER2_type 1 44 -2279 4834 198 47 15 chr20 4666999 4667070 -62000935 + L1MB1 LINE L1 4134 4201 -1945 2077 143 0 0 chr20 4667070 4667364 -62000641 - AluSx SINE Alu -17 295 2 4834 198 47 15 chr20 4667364 4668391 -61999614 + L1MB1 LINE L1 4201 5268 -878 1431 196 0 4 chr20 4668391 4668621 -61999384 - MER8 DNA MER2_type 0 239 11 2977 123 65 45 chr20 4668629 4669181 -61998824 + L1MB1 LINE L1 5266 5828 -361 1319 97 0 43 chr20 4669183 4669369 -61998636 + AluSq SINE Alu 1 178 -135 1210 83 12 0 chr20 4669369 4669538 -61998467 + L1MB1 LINE L1 5998 6168 0 1977 152 30 0 chr20 4669753 4670050 -61997955 - AluJo SINE Alu -6 306 1 1825 228 94 4 chr20 4670075 4670562 -61997443 - MER90 LTR ERV1 0 614 84 400 249 127 71 chr20 4670608 4671073 -61996932 - L1M4 LINE L1 -1873 4273 3782 880 191 0 0 chr20 4671259 4671416 -61996589 + MER3 DNA MER1_type 1 157 -52 186 43 0 0 chr20 4671506 4671529 -61996476 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 1895 137 14 0 chr20 4671531 4671808 -61996197 - AluJb SINE Alu -31 281 1 225 331 12 41 chr20 4672081 4672253 -61995752 + L2 LINE L2 1522 1688 -1626 1306 213 281 19 chr20 4672315 4672738 -61995267 - MLT1F LTR MaLR 0 542 9 5854 127 14 29 chr20 4673208 4674347 -61993658 - L1PB3 LINE L1 0 6154 5031 813 276 91 111 chr20 4674798 4675177 -61992828 + MER77 LTR ERV1 81 488 -117 763 127 17 17 chr20 4675217 4675335 -61992670 - FRAM SINE Alu -38 138 21 586 234 30 14 chr20 4675345 4675510 -61992495 + MER77 LTR ERV1 426 598 -7 2292 98 7 10 chr20 4675900 4676206 -61991799 - AluSx SINE Alu -2 310 6 693 164 8 22 chr20 4676434 4676568 -61991437 + MSTD LTR MaLR 1 132 -264 387 0 0 0 chr20 4676578 4676621 -61991384 + (TG)n Simple_repeat Simple_repeat 2 44 0 613 86 39 0 chr20 4676621 4676749 -61991256 + (TA)n Simple_repeat Simple_repeat 1 133 0 1807 32 28 0 chr20 4676749 4676965 -61991040 - L1PA5 LINE L1 -5 6149 5928 1007 215 20 28 chr20 4676983 4677234 -61990771 + MSTD LTR MaLR 148 396 0 383 198 222 12 chr20 4678084 4678251 -61989754 + L2 LINE L2 937 1138 -2176 1289 297 11 23 chr20 4678463 4678934 -61989071 + L1MCb LINE L1 5 469 -5576 * 1865 208 123 64 chr20 4678924 4679307 -61988698 + L1MCb LINE L1 1813 2172 -4392 254 33 0 0 chr20 4679307 4679337 -61988668 + MSTC LTR MaLR 324 353 -75 1865 208 123 64 chr20 4679337 4679851 -61988154 + L1MCb LINE L1 2172 2611 -3953 3249 186 24 16 chr20 4679861 4680521 -61987484 + L1MB7 LINE L1 4781 5435 -743 1434 158 114 70 chr20 4680521 4680950 -61987055 + LTR7 LTR ERV1 1 448 -2 3249 186 24 16 chr20 4680950 4681328 -61986677 + L1MB7 LINE L1 5435 5830 -348 1872 157 7 0 chr20 4681328 4681621 -61986384 + AluJb SINE Alu 1 295 -17 3249 186 24 16 chr20 4681621 4681682 -61986323 + L1MB7 LINE L1 5830 5889 -289 4548 103 37 83 chr20 4681682 4681954 -61986051 - MER4E LTR ERV1 0 779 496 2397 137 36 5 chr20 4681954 4682340 -61985665 + MER48 LTR ERV1 1 398 0 4548 103 37 83 chr20 4682340 4682468 -61985537 - MER4E LTR ERV1 -283 496 364 2197 48 58 55 chr20 4682468 4682777 -61985228 - AluY SINE Alu -1 310 1 4548 103 37 83 chr20 4682777 4683192 -61984813 - MER4E LTR ERV1 -415 364 1 1303 201 16 33 chr20 4683192 4683495 -61984510 + L1MB7 LINE L1 5886 6183 -1 1331 92 11 0 chr20 4683521 4683705 -61984300 + MER30 DNA MER1_type 1 186 -44 608 151 0 0 chr20 4683705 4683798 -61984207 - AluJ/FLAM SINE Alu -218 94 2 23 33 0 0 chr20 4684197 4684227 -61983778 + AT_rich Low_complexity Low_complexity 1 30 0 * 230 250 148 0 chr20 4684214 4684229 -61983776 - L1MA4A LINE L1 -21 6282 6268 4657 111 9 0 chr20 4684229 4684886 -61983119 - L1PB4 LINE L1 -31 6125 5463 1405 124 0 0 chr20 4684937 4685122 -61982883 + AluSx SINE Alu 5 189 -123 674 222 146 77 chr20 4685189 4685423 -61982582 - LTR28 LTR ERV1 -237 607 343 505 242 121 18 chr20 4685518 4685683 -61982322 - LTR1 LTR ERV1 -568 217 36 256 146 91 0 chr20 4685693 4685748 -61982257 - LTR1B LTR ERV1 -724 102 43 708 144 0 0 chr20 4685764 4685868 -61982137 + AluSx SINE Alu 185 288 -22 507 305 60 73 chr20 4686279 4686468 -61981537 + HAL1 LINE L1 1113 1296 -1211 4377 108 21 57 chr20 4686468 4687184 -61980821 + LTR8 LTR ERV1 2 691 0 507 305 60 73 chr20 4687184 4687364 -61980641 + HAL1 LINE L1 1296 1477 -1030 298 231 69 39 chr20 4687373 4687503 -61980502 - L1ME4a LINE L1 -56 6065 5932 360 208 123 39 chr20 4687559 4687689 -61980316 - L1ME4a LINE L1 -11 6110 5970 2294 81 3 0 chr20 4687719 4688028 -61979977 - AluSq SINE Alu -3 310 1 606 128 118 205 chr20 4688754 4688859 -61979146 - MLT1A2 LTR MaLR -135 255 142 2120 95 7 0 chr20 4688859 4689154 -61978851 - AluSq SINE Alu -16 297 1 606 128 118 205 chr20 4689154 4689315 -61978690 - MLT1A2 LTR MaLR -248 142 3 1624 143 35 7 chr20 4689488 4689775 -61978230 - AluSx SINE Alu -17 295 1 396 71 0 0 chr20 4689802 4689858 -61978147 + (TG)n Simple_repeat Simple_repeat 2 57 0 444 280 80 19 chr20 4689917 4690225 -61977780 + L1MC/D LINE L1 5269 5597 -747 291 282 0 68 chr20 4690306 4690409 -61977596 - L3 LINE CR1 -1 1576 1481 595 187 150 27 chr20 4690576 4690739 -61977266 - MER5A DNA MER1_type 0 189 4 363 313 30 0 chr20 4691015 4691149 -61976856 + L2 LINE L2 2889 3026 -287 588 257 76 45 chr20 4691150 4691438 -61976567 - L2 LINE L2 -1050 2264 1968 1024 278 65 39 chr20 4691549 4691980 -61976025 + HAL1 LINE L1 206 647 -1860 390 241 108 59 chr20 4691998 4692201 -61975804 + HAL1 LINE L1 759 971 -1536 2724 10 0 3 chr20 4692204 4692516 -61975489 + AluY SINE Alu 1 311 0 227 277 131 15 chr20 4692594 4692724 -61975281 + MER21B LTR ERV1 708 852 -11 2024 104 21 10 chr20 4692925 4693214 -61974791 + AluSx SINE Alu 1 292 -20 683 189 8 15 chr20 4693603 4693735 -61974270 + FLAM_A SINE Alu 1 131 -2 375 154 0 0 chr20 4693857 4693922 -61974083 + CT-rich Low_complexity Low_complexity 1 65 0 1752 138 95 0 chr20 4693938 4694221 -61973784 - AluSg SINE Alu 0 310 1 1628 266 42 13 chr20 4694286 4694760 -61973245 - MER74B LTR ERVL -75 547 60 549 176 34 8 chr20 4694775 4694894 -61973111 + MER3 DNA MER1_type 70 191 -18 264 200 169 4 chr20 4696110 4696216 -61971789 + L1ME LINE L1 5530 5649 -472 254 174 58 43 chr20 4696251 4696320 -61971685 + L1ME LINE L1 5782 5851 -270 21 36 0 0 chr20 4696415 4696443 -61971562 + AT_rich Low_complexity Low_complexity 1 28 0 2703 128 57 0 chr20 4696597 4697018 -61970987 + MER65A LTR ERV1 1 445 0 1139 175 14 153 chr20 4697303 4697622 -61970383 - MLT1A1 LTR MaLR -51 314 51 2104 102 0 7 chr20 4697622 4697916 -61970089 + AluSx SINE Alu 1 292 -20 1139 175 14 153 chr20 4697916 4697961 -61970044 - MLT1A1 LTR MaLR -314 51 1 446 316 40 28 chr20 4699901 4700151 -61967854 - LTR16C LTR ERVL -158 333 81 387 302 40 50 chr20 4700269 4700460 -61967545 + L1ME4a LINE L1 4490 4680 -1466 2074 107 17 0 chr20 4700460 4700749 -61967256 + AluSx SINE Alu 1 294 -18 387 302 40 50 chr20 4700749 4700779 -61967226 + L1ME4a LINE L1 4680 4709 -1437 26 0 0 27 chr20 4701452 4701464 -61966541 + AT_rich Low_complexity Low_complexity 1 12 -24 2274 88 0 0 chr20 4701464 4701758 -61966247 - AluSx SINE Alu -18 294 1 26 0 0 27 chr20 4701758 4701782 -61966223 + AT_rich Low_complexity Low_complexity 12 36 0 192 77 0 0 chr20 4702024 4702050 -61965955 + (GA)n Simple_repeat Simple_repeat 2 27 0 937 265 109 123 chr20 4702432 4702749 -61965256 + L2 LINE L2 1704 2024 -1290 973 131 49 38 chr20 4702749 4702932 -61965073 + MER5A DNA MER1_type 4 188 -1 937 265 109 123 chr20 4702932 4703442 -61964563 + L2 LINE L2 2024 2698 -616 1671 185 0 3 chr20 4703442 4703739 -61964266 + AluJb SINE Alu 1 296 -16 937 265 109 123 chr20 4703739 4703877 -61964128 + L2 LINE L2 2698 2836 -478 1959 244 46 33 chr20 4704376 4704474 -61963531 + MLT1G LTR MaLR 1 96 -494 2262 94 0 0 chr20 4704474 4704773 -61963232 - AluSx SINE Alu -12 300 2 1959 244 46 33 chr20 4704773 4705256 -61962749 + MLT1G LTR MaLR 96 590 0 1704 136 0 68 chr20 4705969 4706292 -61961713 - AluJo SINE Alu -11 301 1 22 0 0 0 chr20 4707055 4707077 -61960928 + GC_rich Low_complexity Low_complexity 1 22 0 27 73 0 0 chr20 4707657 4707712 -61960293 + GC_rich Low_complexity Low_complexity 1 55 0 207 188 0 0 chr20 4707981 4708029 -61959976 + G-rich Low_complexity Low_complexity 4 51 0 386 305 51 44 chr20 4708822 4709011 -61958994 + L1ME4a LINE L1 5333 5522 -720 271 333 38 9 chr20 4709071 4709176 -61958829 + MIR SINE MIR 79 186 -76 347 297 67 24 chr20 4709245 4709454 -61958551 + L1ME4a LINE L1 5616 5833 -288 359 343 75 0 chr20 4710694 4710828 -61957177 - MER5B DNA MER1_type -30 148 5 257 255 69 39 chr20 4711087 4711189 -61956816 + MIR SINE MIR 45 149 -113 3390 143 27 13 chr20 4711438 4712058 -61955947 + L1 LINE L1 4021 4649 -1497 2804 157 9 0 chr20 4712059 4712519 -61955486 - L1 LINE L1 -2043 4103 3640 1237 219 4 4 chr20 4712513 4712769 -61955236 - L1 LINE L1 -3310 2836 2581 * 296 252 115 31 chr20 4712818 4713044 -61954961 - L1M4 LINE L1 -1530 4616 4372 225 289 175 5 chr20 4713382 4713576 -61954429 - L1M4 LINE L1 -2201 3945 3719 906 320 125 14 chr20 4713647 4714078 -61953927 + L2 LINE L2 2196 2674 -640 810 107 0 0 chr20 4714090 4714202 -61953803 - AluJb SINE Alu -186 126 15 490 332 46 5 chr20 4714202 4714419 -61953586 + L2 LINE L2 2692 2917 -397 282 270 22 45 chr20 4714423 4714512 -61953493 + L2 LINE L2 3186 3272 0 1333 171 77 18 chr20 4714568 4714842 -61953163 + AluJo SINE Alu 9 298 -14 874 158 0 0 chr20 4714964 4715097 -61952908 + FLAM_C SINE Alu 1 133 0 221 196 0 0 chr20 4715110 4715156 -61952849 + L2 LINE L2 3268 3313 0 405 313 64 38 chr20 4715636 4715884 -61952121 - L1M4 LINE L1 -743 5403 5136 3633 104 73 0 chr20 4715884 4716421 -61951584 - L1PA13 LINE L1 0 6163 5588 405 313 64 38 chr20 4716421 4716622 -61951383 - L1M4 LINE L1 -1010 5136 4942 478 323 75 21 chr20 4716703 4717357 -61950648 - L1M4 LINE L1 -1302 4844 4156 971 275 210 7 chr20 4717999 4718681 -61949324 - L2 LINE L2 0 3313 2476 585 196 43 43 chr20 4719174 4719337 -61948668 + L1MB8 LINE L1 6022 6184 0 24 32 0 0 chr20 4721999 4722030 -61945975 + AT_rich Low_complexity Low_complexity 1 31 0 2329 145 32 54 chr20 4722676 4722743 -61945262 - Tigger2a DNA MER2_type -2276 432 365 2138 82 7 0 chr20 4722743 4723051 -61944954 - AluSx SINE Alu 0 310 1 2329 145 32 54 chr20 4723051 4723424 -61944581 - Tigger2a DNA MER2_type -2343 365 1 2680 152 38 2 chr20 4723701 4724149 -61943856 + MER88 LTR ERVL 1 464 0 2048 105 3 10 chr20 4724259 4724565 -61943440 + AluSq SINE Alu 1 304 -9 979 180 22 11 chr20 4725332 4725515 -61942490 - MER5A DNA MER1_type -4 185 1 535 261 155 0 chr20 4725787 4725948 -61942057 - MER5A DNA MER1_type 0 189 4 858 182 0 0 chr20 4726334 4726466 -61941539 - FLAM_A SINE Alu -1 132 1 650 290 36 23 chr20 4726878 4727176 -61940829 + MER115 DNA AcHobo 134 455 -238 696 198 0 0 chr20 4727706 4727832 -61940173 + FRAM SINE Alu 33 158 -18 2060 100 0 0 chr20 4727837 4728148 -61939857 + AluSg SINE Alu 1 311 0 435 258 49 63 chr20 4728220 4728363 -61939642 + L1ME4a LINE L1 5795 5934 -187 2466 31 0 0 chr20 4728363 4728651 -61939354 + AluY SINE Alu 3 290 -21 435 258 49 63 chr20 4728651 4728794 -61939211 + L1ME4a LINE L1 5934 6077 -44 1683 200 141 50 chr20 4728804 4729265 -61938740 + MLT2B1 LTR ERVL 18 520 0 201 348 29 0 chr20 4729406 4729475 -61938530 - MIR SINE MIR -18 244 174 249 183 56 56 chr20 4729624 4729695 -61938310 - MER91C DNA MER1_type -48 92 22 297 0 0 0 chr20 4729932 4729965 -61938040 + (A)n Simple_repeat Simple_repeat 1 33 0 2148 155 45 18 chr20 4730104 4730484 -61937521 - MLT1B LTR MaLR 0 390 1 1749 164 13 7 chr20 4731684 4731988 -61936017 - AluJb SINE Alu -6 306 1 1736 218 11 5 chr20 4732301 4732681 -61935324 + L1MB7 LINE L1 5798 6179 -5 2124 116 3 0 chr20 4732691 4733002 -61935003 - AluSx SINE Alu 0 312 1 3155 71 7 0 chr20 4733641 4734052 -61933953 - L1PA8 LINE L1 0 6172 5759 2239 97 0 0 chr20 4735137 4735437 -61932568 + AluSx SINE Alu 1 300 -12 696 208 125 17 chr20 4735457 4735697 -61932308 - Charlie4a DNA MER1_type -37 471 206 516 209 27 0 chr20 4735697 4735807 -61932198 - MER81 DNA DNA 0 114 2 347 137 0 0 chr20 4735809 4735860 -61932145 - MER81 DNA DNA -63 51 1 972 202 9 37 chr20 4735861 4736079 -61931926 - Charlie4a DNA MER1_type -296 212 1 1417 258 129 48 chr20 4736273 4736589 -61931416 + L1ME3A LINE L1 5509 5798 -372 1575 184 7 3 chr20 4736589 4736883 -61931122 + AluJo SINE Alu 1 295 -17 1417 258 129 48 chr20 4736883 4737170 -61930835 + L1ME3A LINE L1 5798 6161 -9 202 197 121 15 chr20 4737774 4737840 -61930165 - MIR3 SINE MIR -133 75 3 249 273 52 13 chr20 4738771 4738848 -61929157 - L2 LINE L2 -35 3237 3158 1859 209 88 33 chr20 4739021 4739499 -61928506 + L1ME3A LINE L1 5595 6108 -62 2140 102 0 0 chr20 4739499 4739794 -61928211 + AluY SINE Alu 1 295 -16 1859 209 88 33 chr20 4739794 4739861 -61928144 + L1ME3A LINE L1 6108 6170 0 2205 165 6 3 chr20 4739876 4740240 -61927765 - MLT1A1 LTR MaLR 0 365 1 232 211 233 11 chr20 4741193 4741283 -61926722 + MIR3 SINE MIR 78 187 -21 25 0 0 0 chr20 4742172 4742197 -61925808 + GC_rich Low_complexity Low_complexity 1 25 0 617 284 62 0 chr20 4743960 4744136 -61923869 + MIR SINE MIR 62 248 -14 1730 121 72 8 chr20 4744417 4744682 -61923323 + AluJo SINE Alu 6 287 -25 423 38 0 0 chr20 4744684 4744737 -61923268 + (TG)n Simple_repeat Simple_repeat 2 54 0 361 260 0 62 chr20 4744737 4744833 -61923172 + L1MC4 LINE L1 6614 6703 -1339 207 0 0 0 chr20 4744851 4744874 -61923131 + (CA)n Simple_repeat Simple_repeat 2 24 0 280 195 110 37 chr20 4746006 4746088 -61921917 + L2 LINE L2 3175 3262 -10 694 214 132 6 chr20 4746099 4746281 -61921724 - MIR SINE MIR -37 225 21 1897 128 3 0 chr20 4746597 4746879 -61921126 - AluSq SINE Alu -4 309 27 2040 121 0 7 chr20 4748528 4748833 -61919172 - AluSx SINE Alu -9 303 1 497 317 66 49 chr20 4748984 4749350 -61918655 - L1MC4a LINE L1 -1903 5905 5534 2096 101 7 3 chr20 4751044 4751350 -61916655 - AluSp SINE Alu 0 313 7 217 348 43 0 chr20 4752552 4752644 -61915361 - L2 LINE L2 -5 3267 3172 561 217 77 14 chr20 4752734 4752877 -61915128 + MER63A DNA MER1_type 53 204 -6 265 359 220 13 chr20 4753133 4753515 -61914490 - L2 LINE L2 -2 3270 2810 454 208 31 0 chr20 4753609 4753705 -61914300 - MER5A DNA MER1_type -80 109 11 215 325 8 32 chr20 4753727 4753850 -61914155 - L2 LINE L2 -559 2755 2636 1780 150 11 0 chr20 4753882 4754169 -61913836 + AluJb SINE Alu 6 295 -17 997 212 33 0 chr20 4754846 4755058 -61912947 + MER20 DNA MER1_type 1 219 0 21 0 0 0 chr20 4755405 4755426 -61912579 + AT_rich Low_complexity Low_complexity 1 21 0 2129 106 3 6 chr20 4755749 4756060 -61911945 - AluSx SINE Alu -2 310 1 1800 150 7 7 chr20 4756060 4756353 -61911652 - AluJb SINE Alu -19 293 1 1685 189 0 0 chr20 4757044 4757335 -61910670 + AluJo SINE Alu 7 297 -15 1146 133 6 17 chr20 4758277 4758458 -61909547 + AluJo SINE Alu 91 269 -43 1883 119 3 11 chr20 4758494 4758834 -61909171 + AluSx SINE Alu 1 338 0 1395 272 28 6 chr20 4758936 4759296 -61908709 - LTR16C LTR ERVL 0 491 124 2186 97 7 0 chr20 4760326 4760626 -61907379 - AluSc SINE Alu -7 302 1 268 330 191 0 chr20 4761165 4761338 -61906667 + L2 LINE L2 2965 3170 -102 1528 132 0 0 chr20 4762157 4762385 -61905620 - AluSg/x SINE Alu -1 309 82 1106 168 0 0 chr20 4762418 4762585 -61905420 - FAM SINE Alu -8 167 1 2220 161 43 21 chr20 4763222 4763645 -61904360 + MSTB1 LTR MaLR 1 432 0 6763 170 19 11 chr20 4763693 4765033 -61902972 + L1MC3 LINE L1 6335 7784 -1 1553 180 45 7 chr20 4765042 4765331 -61902674 + AluJb SINE Alu 1 300 -12 777 172 9 4 chr20 4765333 4765490 -61902515 + L1MB4 LINE L1 5867 6021 -159 286 179 0 0 chr20 4765490 4765546 -61902459 + Alu SINE Alu 242 297 -5 472 260 86 36 chr20 4765549 4765888 -61902117 + L1MB7 LINE L1 5194 5543 -619 2411 261 75 22 chr20 4766001 4766734 -61901271 + L1ME3 LINE L1 5361 6132 -30 1883 170 55 18 chr20 4766875 4767258 -61900747 + L1MB7 LINE L1 5754 6151 -33 522 0 0 0 chr20 4767259 4767317 -61900688 + (TTTTA)n Simple_repeat Simple_repeat 4 61 0 720 273 61 4 chr20 4767792 4768070 -61899935 + L1ME3 LINE L1 5627 5920 -242 1624 238 72 12 chr20 4768075 4768504 -61899501 + MLT1C LTR MaLR 9 463 -4 661 306 51 0 chr20 4768505 4768740 -61899265 + L1ME3 LINE L1 5914 6160 -2 788 170 0 15 chr20 4768803 4768938 -61899067 - FLAM_C SINE Alu 0 133 1 318 221 126 11 chr20 4769060 4769155 -61898850 - LTR16C LTR ERVL -6 485 380 250 282 51 8 chr20 4769185 4769302 -61898703 - LTR16C LTR ERVL -188 303 182 537 220 74 60 chr20 4770387 4770574 -61897431 + MIR SINE MIR 59 259 -3 589 304 163 19 chr20 4770791 4771238 -61896767 + L2 LINE L2 2590 3104 -209 670 218 78 63 chr20 4771258 4771644 -61896361 - MLT1H LTR MaLR 0 549 95 290 221 305 0 chr20 4771742 4771837 -61896168 + L2 LINE L2 3171 3294 -19 818 232 0 0 chr20 4771849 4772013 -61895992 - FRAM SINE Alu -6 170 7 27 0 0 0 chr20 4772130 4772157 -61895848 + AT_rich Low_complexity Low_complexity 1 27 0 1937 118 4 0 chr20 4772157 4772428 -61895577 - AluSq SINE Alu -39 274 3 197 333 0 0 chr20 4772853 4772919 -61895086 + MIR SINE MIR 58 123 -85 282 185 163 33 chr20 4773014 4773106 -61894899 - Charlie7 DNA MER1_type 0 2612 2509 225 0 0 0 chr20 4773177 4773202 -61894803 + (T)n Simple_repeat Simple_repeat 1 25 0 531 174 0 11 chr20 4773347 4773439 -61894566 + AluJ/FLAM SINE Alu 4 94 -218 620 169 8 23 chr20 4773445 4773575 -61894430 + FRAM SINE Alu 43 170 -6 15065 196 65 10 chr20 4773621 4773656 -61894349 - L1PB1 LINE L1 -21 6846 6814 2266 89 3 0 chr20 4773656 4773960 -61894045 - AluSg SINE Alu -5 305 1 15065 196 65 10 chr20 4773960 4775870 -61892135 - L1PB1 LINE L1 -53 6814 5010 668 12 0 12 chr20 4775870 4775952 -61892053 + (TTTC)n Simple_repeat Simple_repeat 1 81 0 2035 112 0 3 chr20 4775955 4776240 -61891765 - AluSq SINE Alu -29 284 1 15065 196 65 10 chr20 4776240 4778167 -61889838 - L1PB1 LINE L1 -1858 5009 3189 2122 116 0 31 chr20 4778167 4778487 -61889518 - AluSx SINE Alu -2 310 1 15065 196 65 10 chr20 4778487 4781060 -61886945 - L1PB1 LINE L1 -3678 3189 6 439 243 130 35 chr20 4781066 4781235 -61886770 - MIR SINE MIR -46 216 32 216 324 193 7 chr20 4782179 4782324 -61885681 - L2 LINE L2 -49 3264 3093 3919 177 29 4 chr20 4782334 4783035 -61884970 + MER44D DNA MER2_type 13 602 -3 431 234 14 0 chr20 4783042 4783146 -61884859 + L1ME2 LINE L1 6053 6163 -3 251 287 92 88 chr20 4783188 4783439 -61884566 - L2 LINE L2 -246 3067 2816 1755 162 14 0 chr20 4783584 4783913 -61884092 + AluJb SINE Alu 1 333 0 826 160 0 0 chr20 4784002 4784133 -61883872 - FLAM_A SINE Alu -2 131 1 776 175 29 6 chr20 4785246 4785403 -61882602 + MLT1D LTR MaLR 1 144 -361 1658 240 36 44 chr20 4785545 4785947 -61882058 + LTR16C LTR ERVL 45 444 -47 2205 107 0 0 chr20 4785947 4786257 -61881748 - AluSg SINE Alu 0 310 1 1658 240 36 44 chr20 4786257 4786304 -61881701 + LTR16C LTR ERVL 444 490 -1 2328 110 0 0 chr20 4786932 4787232 -61880773 - AluSx SINE Alu -12 300 1 535 270 47 18 chr20 4787679 4787957 -61880048 + HAL1 LINE L1 1894 2179 -328 338 286 153 20 chr20 4787999 4788195 -61879810 + HAL1 LINE L1 2281 2502 -5 2350 111 0 3 chr20 4788398 4788704 -61879301 + AluSq SINE Alu 1 305 -8 2594 64 0 0 chr20 4789557 4789853 -61878152 - AluY SINE Alu -15 296 1 418 263 11 0 chr20 4790892 4790987 -61877018 + MER5A DNA MER1_type 10 105 -84 1767 159 98 94 chr20 4791628 4792290 -61875715 - MER4A LTR ERV1 0 872 1 705 271 135 10 chr20 4792330 4792633 -61875372 - L2 LINE L2 -98 3215 2875 3468 128 0 4 chr20 4792669 4793168 -61874837 + LOR1a LTR ERV1 1 497 0 2163 112 53 36 chr20 4793811 4794169 -61873836 - THE1B LTR MaLR 0 364 1 473 248 0 9 chr20 4794190 4794299 -61873706 + MER5B DNA MER1_type 48 155 -23 795 151 22 22 chr20 4794330 4794469 -61873536 + MER5A DNA MER1_type 28 166 -23 193 0 61 30 chr20 4795424 4795457 -61872548 + (TTTTG)n Simple_repeat Simple_repeat 5 38 0 2161 98 4 0 chr20 4795691 4795966 -61872039 - AluSx SINE Alu -36 276 1 439 305 159 21 chr20 4796070 4796309 -61871696 - L1M4 LINE L1 -1526 4620 4349 4359 131 43 49 chr20 4796465 4797254 -61870751 - LTR1 LTR ERV1 -1 784 1 1049 149 40 0 chr20 4797655 4797807 -61870198 - L1 LINE L1 -852 5294 5131 1713 197 13 13 chr20 4797807 4798117 -61869888 - AluJb SINE Alu -2 310 1 1049 149 40 0 chr20 4798117 4798165 -61869840 - L1 LINE L1 -1015 5131 5086 890 166 41 131 chr20 4798165 4798332 -61869673 + L1MA9 LINE L1 6021 6147 -165 303 28 0 0 chr20 4798332 4798368 -61869637 + (CA)n Simple_repeat Simple_repeat 1 36 0 890 166 41 131 chr20 4798368 4798520 -61869485 + L1MA9 LINE L1 6147 6311 -1 26 0 0 0 chr20 4798527 4798553 -61869452 + AT_rich Low_complexity Low_complexity 1 26 0 520 205 49 0 chr20 4798817 4798939 -61869066 + MER94 DNA DNA 1 128 -6 207 204 0 0 chr20 4799660 4799709 -61868296 + CT-rich Low_complexity Low_complexity 1 49 0 1423 169 37 36 chr20 4799882 4799908 -61868097 - MLT2D LTR ERVL 0 414 390 402 21 0 0 chr20 4799908 4799955 -61868050 + (TG)n Simple_repeat Simple_repeat 2 48 0 1423 169 37 36 chr20 4799955 4800277 -61867728 - MLT2D LTR ERVL -24 390 1 296 272 52 44 chr20 4800400 4800536 -61867469 - MIR3 SINE MIR -65 143 7 2266 107 0 13 chr20 4801430 4801740 -61866265 + AluSg SINE Alu 1 306 -4 240 86 0 0 chr20 4805338 4805373 -61862632 + (A)n Simple_repeat Simple_repeat 1 35 0 205 232 11 105 chr20 4805380 4805475 -61862530 - MIR SINE MIR 0 262 177 397 188 0 38 chr20 4805476 4805556 -61862449 + MER116 DNA Mariner 2 78 -2 1901 121 0 93 chr20 4805773 4806120 -61861885 + AluSx SINE Alu 1 318 0 619 228 91 10 chr20 4806440 4806637 -61861368 + LTR33 LTR ERVL 308 520 -1 1917 104 93 11 chr20 4807548 4807827 -61860178 + AluSx SINE Alu 2 303 -9 383 286 29 100 chr20 4807892 4808241 -61859764 + MLT1I LTR MaLR 71 394 -15 2233 130 14 9 chr20 4809199 4809544 -61858461 - MER7A DNA MER2_type 0 346 2 671 281 130 4 chr20 4809551 4809782 -61858223 - MIR SINE MIR -1 261 2 791 199 37 0 chr20 4810028 4810189 -61857816 - MER5A DNA MER1_type -3 186 20 22 35 0 0 chr20 4811456 4811485 -61856520 + AT_rich Low_complexity Low_complexity 1 29 0 972 222 94 0 chr20 4811538 4811741 -61856264 + MIR SINE MIR 17 238 -24 722 129 11 0 chr20 4811772 4811901 -61856104 + L1MB3 LINE L1 5825 5957 -211 1385 140 4 25 chr20 4811949 4812192 -61855813 + L1MB3 LINE L1 5944 6181 -2 723 283 88 23 chr20 4812366 4812709 -61855296 + L1MC4a LINE L1 5578 5942 -1866 1609 160 42 11 chr20 4812716 4812979 -61855026 + AluSx SINE Alu 3 273 -39 402 74 0 0 chr20 4812980 4813034 -61854971 + (GGGGA)n Simple_repeat Simple_repeat 1 54 0 941 148 7 0 chr20 4814383 4814525 -61853480 - FLAM_C SINE Alu 0 143 1 270 218 39 13 chr20 4814824 4814889 -61853116 + (TATAG)n Simple_repeat Simple_repeat 5 74 -10 1725 151 0 96 chr20 4814889 4815042 -61852963 + AluJo SINE Alu 2 107 -195 1764 119 12 4 chr20 4815042 4815295 -61852710 + AluSq SINE Alu 11 265 -48 1725 151 0 96 chr20 4815295 4815473 -61852532 + AluJo SINE Alu 107 301 -1 270 218 39 13 chr20 4815473 4815485 -61852520 + (TATAG)n Simple_repeat Simple_repeat 74 84 0 2072 124 0 3 chr20 4819288 4819602 -61848403 + AluSx SINE Alu 1 313 0 439 225 137 85 chr20 4819608 4819901 -61848104 + L1ME3A LINE L1 5742 6049 -121 2216 130 0 0 chr20 4820575 4820882 -61847123 + AluSx SINE Alu 1 307 -5 1361 174 170 0 chr20 4821092 4821403 -61846602 - MLT1A1 LTR MaLR 0 365 2 341 202 45 11 chr20 4822355 4822444 -61845561 - L1MC4 LINE L1 -1337 6705 6614 781 146 47 113 chr20 4822446 4822476 -61845529 - MER20 DNA MER1_type 0 219 189 2169 109 0 3 chr20 4822476 4822784 -61845221 - AluSq SINE Alu 0 308 2 781 146 47 113 chr20 4822784 4822811 -61845194 - MER20 DNA MER1_type -30 189 162 908 176 0 24 chr20 4822811 4822981 -61845024 - FRAM SINE Alu 0 166 1 781 146 47 113 chr20 4822981 4823133 -61844872 - MER20 DNA MER1_type -57 162 22 2381 131 53 51 chr20 4823134 4823601 -61844404 + L1MB3 LINE L1 5708 6175 -8 313 232 0 0 chr20 4823601 4823657 -61844348 + L1MC4 LINE L1 6648 6703 -1339 1975 155 0 7 chr20 4823660 4823956 -61844049 - AluJb SINE Alu -18 294 1 1031 181 13 44 chr20 4824036 4824217 -61843788 + MLT1D LTR MaLR 267 452 -53 1792 190 0 10 chr20 4824217 4824522 -61843483 + AluJo SINE Alu 1 302 -10 1888 147 9 34 chr20 4824522 4824842 -61843163 + AluJb SINE Alu 1 312 0 1031 181 13 44 chr20 4824842 4824885 -61843120 + MLT1D LTR MaLR 450 485 -20 28 0 0 0 chr20 4824971 4824999 -61843006 + AT_rich Low_complexity Low_complexity 1 28 0 2128 94 56 3 chr20 4825095 4825383 -61842622 - AluSx SINE Alu -9 303 1 343 316 165 14 chr20 4825468 4825753 -61842252 - L2 LINE L2 0 3272 2945 1748 213 48 21 chr20 4825850 4826334 -61841671 + MLT1D LTR MaLR 1 497 -8 194 275 73 73 chr20 4826349 4826458 -61841547 - L2 LINE L2 -583 2731 2623 181 340 107 14 chr20 4826857 4827072 -61840933 - L2 LINE L2 -1241 2073 1839 1712 157 27 27 chr20 4827197 4827490 -61840515 - AluJo SINE Alu -19 293 1 423 263 52 66 chr20 4828020 4828309 -61839696 + L1 LINE L1 5118 5402 -744 190 273 30 30 chr20 4828395 4828494 -61839511 + L2 LINE L2 2168 2266 -1048 1981 153 7 0 chr20 4829232 4829520 -61838485 - AluJo SINE Alu -12 300 11 1043 199 178 23 chr20 4830408 4830801 -61837204 - LTR16A1 LTR ERVL -3 454 1 1418 188 59 26 chr20 4831828 4832100 -61835905 + AluJo SINE Alu 6 286 -26 180 0 0 0 chr20 4832100 4832120 -61835885 + (CAAAT)n Simple_repeat Simple_repeat 2 21 0 520 258 17 0 chr20 4832120 4832240 -61835765 + MER5B DNA MER1_type 57 178 0 622 241 21 7 chr20 4833018 4833163 -61834842 - MIR SINE MIR -69 193 47 817 185 12 19 chr20 4833271 4833433 -61834572 - MER5A DNA MER1_type -1 188 28 327 266 142 0 chr20 4833441 4833554 -61834451 - MIR SINE MIR -54 208 80 235 225 27 0 chr20 4834469 4834626 -61833379 + (TG)n Simple_repeat Simple_repeat 1 190 0 22 56 0 0 chr20 4836729 4836765 -61831240 + AT_rich Low_complexity Low_complexity 1 36 0 1846 154 3 17 chr20 4836777 4837069 -61830936 + AluJo SINE Alu 13 300 -12 1713 163 3 21 chr20 4837065 4837390 -61830615 + L1MB4 LINE L1 5860 6178 -2 509 290 104 55 chr20 4837409 4837577 -61830428 - L1ME4a LINE L1 -61 6060 5902 2269 82 0 4 chr20 4837577 4837856 -61830149 + AluSq SINE Alu 11 288 -25 509 290 104 55 chr20 4837856 4838108 -61829897 - L1ME4a LINE L1 -219 5902 5619 230 118 0 0 chr20 4838231 4838265 -61829740 - MER63 DNA MER1_type -896 34 1 244 279 88 0 chr20 4838632 4838700 -61829305 - MIR3 SINE MIR -23 185 112 2330 113 0 0 chr20 4838730 4839023 -61828982 + AluSx SINE Alu 1 293 -19 756 217 38 71 chr20 4839217 4839429 -61828576 - MER63A DNA MER1_type -5 205 1 432 192 131 39 chr20 4839591 4839696 -61828309 - MIR SINE MIR -24 238 117 2484 96 0 0 chr20 4839696 4840008 -61827997 - AluSq SINE Alu -1 312 1 432 192 131 39 chr20 4840008 4840032 -61827973 - MIR SINE MIR -145 117 97 312 194 12 2 chr20 4840051 4840120 -61827885 - LTR16C LTR ERVL 0 491 385 670 248 14 0 chr20 4840177 4840322 -61827683 - LTR16C LTR ERVL -150 341 195 1900 153 6 31 chr20 4840968 4841288 -61826717 + AluJo SINE Alu 1 312 0 21 71 0 0 chr20 4843823 4843865 -61824140 + GC_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr20 4844032 4844056 -61823949 + GC_rich Low_complexity Low_complexity 1 24 0 307 344 0 39 chr20 4844246 4844426 -61823579 + C-rich Low_complexity Low_complexity 4 176 0 2118 140 3 13 chr20 4845829 4846144 -61821861 - AluJo SINE Alu 0 312 1 2129 122 14 3 chr20 4846394 4846690 -61821315 - AluSq SINE Alu -14 299 1 1068 91 0 0 chr20 4846812 4846944 -61821061 + AluSq/x SINE Alu 1 132 -181 1879 167 15 13 chr20 4846944 4847339 -61820666 - Charlie5 DNA MER1_type -3 2609 2214 417 142 82 97 chr20 4847325 4847373 -61820632 - MER3 DNA MER1_type -40 122 122 * 2660 49 0 0 chr20 4847373 4847677 -61820328 + AluY SINE Alu 1 304 -7 417 142 82 97 chr20 4847677 4847762 -61820243 - MER3 DNA MER1_type -39 123 38 2250 98 14 0 chr20 4848118 4848440 -61819565 + AluSq SINE Alu 1 313 0 712 296 98 15 chr20 4848665 4848939 -61819066 - LTR16C LTR ERVL 0 491 195 2311 89 16 22 chr20 4849016 4849329 -61818676 + AluSx SINE Alu 1 311 -1 1941 225 61 23 chr20 4850418 4850939 -61817066 + MLT1H LTR MaLR 7 547 -2 252 86 0 0 chr20 4851501 4851536 -61816469 + (GAAAA)n Simple_repeat Simple_repeat 2 36 0 328 208 1 37 chr20 4851848 4851933 -61816072 + L1MC4 LINE L1 1973 6987 -1335 1883 149 30 7 chr20 4852186 4852487 -61815518 + AluJb SINE Alu 1 308 -4 305 302 92 62 chr20 4852489 4852847 -61815158 + HAL1 LINE L1 895 1263 -1244 316 261 43 87 chr20 4852953 4853068 -61814937 + L2 LINE L2 3195 3304 -9 233 65 0 0 chr20 4853178 4853209 -61814796 - L1P4 LINE L1 -436 5732 5702 845 160 0 0 chr20 4853210 4853335 -61814670 + FLAM_C SINE Alu 1 125 -18 2310 92 112 9 chr20 4853361 4853708 -61814297 + L1PA15 LINE L1 5777 6159 -6 304 287 16 16 chr20 4853936 4854065 -61813940 + HAL1b LINE L1 670 798 -550 1355 197 0 28 chr20 4854619 4854873 -61813132 + AluJo SINE Alu 44 290 -22 288 0 0 0 chr20 4855594 4855626 -61812379 + (TA)n Simple_repeat Simple_repeat 2 33 0 2476 84 0 0 chr20 4855634 4855944 -61812061 - AluSg SINE Alu 0 310 1 21 0 0 0 chr20 4855944 4855965 -61812040 + AT_rich Low_complexity Low_complexity 1 21 0 302 288 76 0 chr20 4856114 4856232 -61811773 - L2 LINE L2 -338 2975 2849 199 333 90 9 chr20 4856971 4857082 -61810923 - L2 LINE L2 -446 2868 2749 349 240 20 10 chr20 4857085 4857185 -61810820 - MLT2E LTR ERVL -50 578 478 668 282 172 19 chr20 4857203 4857399 -61810606 - MLT2F LTR ERVL -107 556 391 1827 144 13 33 chr20 4857399 4857705 -61810300 + AluJo SINE Alu 1 300 -12 668 282 172 19 chr20 4857705 4857990 -61810015 - MLT2F LTR ERVL -272 391 1 303 412 16 10 chr20 4858281 4858475 -61809530 - L2 LINE L2 -552 2762 2568 447 271 124 39 chr20 4858568 4858826 -61809179 - MLT1H LTR MaLR -241 308 29 247 350 26 0 chr20 4858847 4858964 -61809041 - L2 LINE L2 -730 2584 2465 596 250 206 11 chr20 4859496 4859772 -61808233 - LTR16C LTR ERVL -13 478 149 2028 181 160 12 chr20 4860898 4861385 -61806620 - MLT1F1 LTR MaLR -8 559 1 400 259 52 0 chr20 4861413 4861548 -61806457 - LTR16C LTR ERVL -155 336 195 4184 162 69 59 chr20 4862160 4862318 -61805687 - L1MB3 LINE L1 -7 6176 6021 2202 101 3 7 chr20 4862318 4862637 -61805368 + AluSg SINE Alu 1 310 0 4184 162 69 59 chr20 4862637 4863055 -61804950 - L1MB3 LINE L1 -162 6021 5609 2019 84 12 0 chr20 4863055 4863304 -61804701 - AluSg SINE Alu -21 289 38 4184 162 69 59 chr20 4863304 4864011 -61803994 - L1MB3 LINE L1 -574 5609 4853 2273 110 3 3 chr20 4864011 4864310 -61803695 + AluSx SINE Alu 1 299 -13 4184 162 69 59 chr20 4864310 4864421 -61803584 - L1MB3 LINE L1 -1330 4853 4745 252 333 0 0 chr20 4864431 4864527 -61803478 - L1MC4 LINE L1 -156 7886 7791 2030 135 44 3 chr20 4864590 4864886 -61803119 - AluSx SINE Alu -4 308 1 27 0 0 0 chr20 4865048 4865075 -61802930 + AT_rich Low_complexity Low_complexity 1 27 0 1786 168 3 20 chr20 4865222 4865514 -61802491 + AluJb SINE Alu 1 287 -25 486 33 0 0 chr20 4865514 4865574 -61802431 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 363 96 0 0 chr20 4865574 4865626 -61802379 + (GGGGA)n Simple_repeat Simple_repeat 3 54 0 1478 147 5 0 chr20 4865879 4866090 -61801915 + AluJb SINE Alu 8 219 -93 308 182 121 30 chr20 4866328 4866394 -61801611 - L1M4 LINE L1 -860 5286 5215 532 274 88 86 chr20 4866492 4866550 -61801455 + L1MC4a LINE L1 5256 5312 -2496 803 63 9 18 chr20 4866550 4866661 -61801344 + L1PA11 LINE L1 6064 6173 -1 532 274 88 86 chr20 4866661 4866972 -61801033 + L1MC4a LINE L1 5312 5629 -2179 2517 90 0 0 chr20 4866972 4867282 -61800723 + AluSx SINE Alu 1 310 -2 532 274 88 86 chr20 4867282 4867560 -61800445 + L1MC4a LINE L1 5629 5905 -1903 1301 120 12 100 chr20 4868457 4868716 -61799289 - MER46A DNA MER2_type 0 236 1 963 124 164 45 chr20 4868728 4868894 -61799111 - Tigger3(Golem) DNA MER2_type 0 3028 2833 2181 101 8 62 chr20 4868894 4869250 -61798755 + MER1B DNA MER1_type 1 337 0 963 124 164 45 chr20 4869250 4869284 -61798721 - Tigger3(Golem) DNA MER2_type -195 2833 2804 1181 175 0 0 chr20 4869284 4869473 -61798532 - AluJb SINE Alu -11 301 113 445 200 252 26 chr20 4869474 4869557 -61798448 - MER5C DNA MER1_type -32 292 229 1754 159 9 62 chr20 4869557 4869878 -61798127 + AluJb SINE Alu 5 308 -4 445 200 252 26 chr20 4869878 4870024 -61797981 - MER5C DNA MER1_type -95 229 11 311 239 101 55 chr20 4870421 4870530 -61797475 - HAL1 LINE L1 -991 1516 1403 2429 42 0 3 chr20 4870805 4871109 -61796896 - AluY SINE Alu 0 303 1 1346 98 112 0 chr20 4871395 4871501 -61796504 + MER30 DNA MER1_type 3 96 -134 2255 124 3 0 chr20 4871501 4871808 -61796197 + AluSq SINE Alu 1 308 -5 1346 98 112 0 chr20 4871808 4871906 -61796099 + MER30 DNA MER1_type 96 230 0 963 150 105 163 chr20 4872394 4872658 -61795347 - MER2 DNA MER2_type -3 341 102 1595 172 17 43 chr20 4872658 4872960 -61795045 - AluJo SINE Alu -18 294 1 963 150 105 163 chr20 4872960 4873056 -61794949 - MER2 DNA MER2_type -242 102 2 234 0 0 0 chr20 4875136 4875162 -61792843 + (TG)n Simple_repeat Simple_repeat 2 27 0 510 17 0 0 chr20 4878023 4878082 -61789923 + (CA)n Simple_repeat Simple_repeat 2 60 0 2133 134 0 0 chr20 4878394 4878726 -61789279 + AluSx SINE Alu 1 332 0 22 0 0 0 chr20 4879988 4880010 -61787995 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr20 4880438 4880466 -61787539 + AT_rich Low_complexity Low_complexity 1 28 0 1108 174 10 0 chr20 4880710 4880906 -61787099 + L1MB5 LINE L1 5482 5679 -495 1301 249 119 0 chr20 4880918 4881288 -61786717 - MER82 DNA MER2_type -12 641 228 363 233 78 0 chr20 4881284 4881374 -61786631 - MER82 DNA MER2_type -556 97 1 * 2359 142 59 29 chr20 4881382 4881504 -61786501 + L1MB5 LINE L1 5705 5822 -352 2282 99 0 14 chr20 4881504 4881797 -61786208 + AluSx SINE Alu 1 289 -23 2359 142 59 29 chr20 4881797 4882118 -61785887 + L1MB5 LINE L1 5822 6161 -13 282 295 150 20 chr20 4884106 4884306 -61783699 + MIR SINE MIR 13 238 -24 438 260 0 0 chr20 4884949 4885053 -61782952 - MER3 DNA MER1_type -83 126 70 262 183 56 14 chr20 4885545 4885616 -61782389 - L2 LINE L2 -335 2978 2905 345 182 26 39 chr20 4886145 4886222 -61781783 - L2 LINE L2 0 3313 3238 1273 135 61 156 chr20 4886417 4886574 -61781431 + MER2 DNA MER2_type 1 171 -173 2236 122 0 0 chr20 4886574 4886878 -61781127 - AluSx SINE Alu -8 304 1 1273 135 61 156 chr20 4886878 4887099 -61780906 + MER2 DNA MER2_type 171 343 -1 645 264 245 23 chr20 4887696 4888299 -61779706 + L2 LINE L2 2596 3313 0 207 0 0 0 chr20 4888371 4888394 -61779611 + (A)n Simple_repeat Simple_repeat 1 23 0 419 244 128 55 chr20 4888707 4888818 -61779187 + MER5A DNA MER1_type 12 140 -49 2108 90 30 3 chr20 4888818 4889119 -61778886 - AluSx SINE Alu 0 312 1 419 244 128 55 chr20 4889119 4889171 -61778834 + MER5A DNA MER1_type 140 187 -2 946 207 0 22 chr20 4889898 4890077 -61777928 + FAM SINE Alu 1 175 0 183 42 0 0 chr20 4890209 4890233 -61777772 + (TC)n Simple_repeat Simple_repeat 2 25 0 180 0 0 0 chr20 4890286 4890306 -61777699 + (CA)n Simple_repeat Simple_repeat 2 21 0 2363 85 0 0 chr20 4891042 4891349 -61776656 + AluSg SINE Alu 1 307 -3 299 143 0 0 chr20 4892853 4892895 -61775110 - MER20 DNA MER1_type 0 219 178 2026 93 10 3 chr20 4893510 4893800 -61774205 - AluSx SINE Alu -20 292 1 348 318 98 28 chr20 4895753 4896008 -61771997 + L1ME4a LINE L1 5847 6119 -2 267 301 237 3 chr20 4896049 4896264 -61771741 - MIR SINE MIR 0 262 5 233 175 48 79 chr20 4897410 4897536 -61770469 - L1ME4a LINE L1 -18 6103 5982 1291 20 0 0 chr20 4897765 4897937 -61770068 + L1PA5 LINE L1 6000 6171 0 327 269 103 77 chr20 4898031 4898265 -61769740 + L1MC4a LINE L1 5690 5929 -1879 248 154 0 39 chr20 4898486 4898538 -61769467 + L1MC5 LINE L1 7864 7913 -48 1881 145 3 0 chr20 4898941 4899224 -61768781 - AluSx SINE Alu -21 291 8 482 288 183 38 chr20 4899233 4899632 -61768373 - L1M4 LINE L1 -954 5192 4736 328 304 6 88 chr20 4899663 4899834 -61768171 - L1M4 LINE L1 -1959 4187 4031 2225 91 3 7 chr20 4899870 4900179 -61767826 + AluSq SINE Alu 1 308 -5 839 152 0 33 chr20 4900300 4900451 -61767554 + FRAM SINE Alu 21 166 -10 281 252 59 42 chr20 4901117 4901236 -61766769 - L2 LINE L2 -1 3271 3151 473 280 122 19 chr20 4901236 4901604 -61766401 + HAL1 LINE L1 1048 1453 -1054 419 303 168 32 chr20 4901617 4902172 -61765833 - L2 LINE L2 -598 2716 2087 2194 96 7 0 chr20 4902840 4903133 -61764872 + AluSx SINE Alu 1 295 -17 306 193 18 0 chr20 4903142 4903199 -61764806 + U13 snRNA snRNA 19 76 -28 420 301 133 10 chr20 4903347 4903543 -61764462 + MIR SINE MIR 43 262 0 780 245 65 0 chr20 4908918 4909118 -61758887 + MER58A DNA MER1_type 1 213 -11 258 339 9 9 chr20 4909395 4909504 -61758501 + L2 LINE L2 2950 3058 -214 234 282 76 46 chr20 4909586 4909717 -61758288 - MER5A DNA MER1_type -22 167 33 2027 115 3 3 chr20 4911116 4911412 -61756593 + AluSx SINE Alu 1 296 -16 207 0 0 0 chr20 4911471 4911494 -61756511 + (TCCA)n Simple_repeat Simple_repeat 3 25 0 346 291 42 4 chr20 4911526 4911653 -61756352 + L1ME1 LINE L1 6046 6332 -2 234 286 155 43 chr20 4912471 4912505 -61755500 - MIR SINE MIR -60 202 173 1803 143 0 14 chr20 4912505 4912799 -61755206 - AluJo SINE Alu -22 290 1 234 286 155 43 chr20 4912799 4912925 -61755080 - MIR SINE MIR -89 173 24 1715 89 4 4 chr20 4912996 4913232 -61754773 - AluSq SINE Alu -77 236 1 234 245 115 108 chr20 4913570 4913816 -61754189 + L1MC4 LINE L1 7616 7866 -176 1896 133 3 3 chr20 4913816 4914110 -61753895 - AluJo SINE Alu -18 294 1 234 245 115 108 chr20 4914110 4914149 -61753856 + L1MC4 LINE L1 7866 7903 -139 195 42 0 0 chr20 4914991 4915015 -61752990 + (GGGAGA)n Simple_repeat Simple_repeat 5 28 0 193 167 185 19 chr20 4916341 4916395 -61751610 - MIR SINE MIR -61 147 85 208 139 0 28 chr20 4919361 4919397 -61748608 + (GGAGA)n Simple_repeat Simple_repeat 4 38 0 1626 170 6 19 chr20 4920600 4920917 -61747088 - AluSq SINE Alu 0 313 1 335 298 118 32 chr20 4921043 4921389 -61746616 - L1M4 LINE L1 -2189 3957 3582 1725 162 28 0 chr20 4922765 4923049 -61744956 - AluJb SINE Alu -20 292 1 2367 197 108 43 chr20 4924623 4924758 -61743247 + MER77 LTR ERV1 1 126 -479 656 188 8 0 chr20 4924758 4924875 -61743130 + FLAM_C SINE Alu 1 118 -15 2367 197 108 43 chr20 4924875 4925303 -61742702 + MER77 LTR ERV1 126 601 -4 2064 128 20 0 chr20 4925583 4925881 -61742124 + AluSx SINE Alu 1 304 -8 684 273 114 0 chr20 4926482 4926658 -61741347 - MER58A DNA MER1_type -5 219 24 1483 185 21 11 chr20 4926801 4927088 -61740917 + AluJo SINE Alu 1 290 -22 1893 106 48 27 chr20 4927099 4927392 -61740613 + AluSx SINE Alu 11 309 -3 276 263 93 57 chr20 4927950 4928144 -61739861 + HAL1 LINE L1 619 819 -1688 351 256 159 77 chr20 4928161 4928708 -61739297 + L1M2 LINE L1 1757 2078 -1131 286 226 71 0 chr20 4928977 4929061 -61738944 + L1ME4a LINE L1 5348 5437 -2371 * 846 179 72 175 chr20 4929039 4929392 -61738613 + L1MC4 LINE L1 7491 7772 -270 1818 138 10 21 chr20 4929392 4929683 -61738322 + AluSx SINE Alu 1 288 -24 846 179 72 175 chr20 4929683 4929860 -61738145 + L1MC4 LINE L1 7772 7966 -76 991 146 73 26 chr20 4929909 4930101 -61737904 - MER46A DNA MER2_type -22 214 14 1850 132 10 10 chr20 4930310 4930599 -61737406 - AluSx SINE Alu -21 291 3 1951 138 0 13 chr20 4930836 4931140 -61736865 + AluSx SINE Alu 1 300 -12 1934 136 0 16 chr20 4931173 4931481 -61736524 - AluSx SINE Alu -9 303 1 180 97 0 0 chr20 4932574 4932605 -61735400 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1526 171 25 29 chr20 4932607 4932888 -61735117 - AluJo SINE Alu -30 282 3 475 290 154 0 chr20 4933127 4933352 -61734653 - MIR SINE MIR -13 249 13 189 0 0 0 chr20 4933413 4933434 -61734571 + (A)n Simple_repeat Simple_repeat 1 21 0 308 236 90 28 chr20 4934201 4934336 -61733669 + L1ME4a LINE L1 5588 5734 -387 2199 105 0 10 chr20 4934336 4934672 -61733333 - AluSx SINE Alu 0 312 1 437 295 82 75 chr20 4934935 4935506 -61732499 + L1MC4a LINE L1 5257 5780 -341 1413 157 98 0 chr20 4935506 4935787 -61732218 + AluSx SINE Alu 3 308 0 437 295 82 75 chr20 4935787 4935832 -61732173 + L1MC4a LINE L1 5780 5823 -298 271 255 172 25 chr20 4936083 4936240 -61731765 + L1ME4a LINE L1 5941 6120 -1 192 373 0 0 chr20 4936308 4936375 -61731630 - MIR SINE MIR -122 140 74 2189 113 0 0 chr20 4936411 4936722 -61731283 + AluSx SINE Alu 1 311 -1 633 182 84 28 chr20 4937161 4937304 -61730701 + L1MB5 LINE L1 6024 6174 0 1686 140 142 11 chr20 4937414 4937732 -61730273 + MER47A DNA MER2_type 4 366 0 1191 280 70 51 chr20 4940642 4940724 -61727281 + L1MC4a LINE L1 5353 5432 -2376 2219 94 0 0 chr20 4940724 4941001 -61727004 + AluSx SINE Alu 1 277 -35 1191 280 70 51 chr20 4941001 4941443 -61726562 + L1MC4a LINE L1 5432 5887 -1921 1886 147 32 38 chr20 4942055 4942368 -61725637 + AluJb SINE Alu 1 311 -1 1981 125 10 17 chr20 4943291 4943588 -61724417 + AluSx SINE Alu 1 295 -17 180 0 0 0 chr20 4943589 4943609 -61724396 + (CA)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr20 4943838 4943866 -61724139 + AT_rich Low_complexity Low_complexity 1 28 0 884 122 0 0 chr20 4943870 4943985 -61724020 + FLAM_C SINE Alu 1 115 -28 318 26 0 0 chr20 4943988 4944027 -61723978 + (GGGA)n Simple_repeat Simple_repeat 4 42 0 476 273 106 48 chr20 4945414 4945648 -61722357 + L2 LINE L2 2951 3209 -104 1599 173 34 20 chr20 4945648 4945943 -61722062 + AluJo SINE Alu 1 299 -13 476 273 106 48 chr20 4945943 4946019 -61721986 + L2 LINE L2 3209 3279 -34 262 279 69 48 chr20 4946056 4946275 -61721730 + L2 LINE L2 3042 3272 0 225 65 0 0 chr20 4947246 4947277 -61720728 + (T)n Simple_repeat Simple_repeat 1 31 0 625 221 59 0 chr20 4947860 4947996 -61720009 + MER3 DNA MER1_type 66 209 0 1635 190 0 7 chr20 4948797 4949086 -61718919 - AluJo SINE Alu -25 287 1 1865 147 3 46 chr20 4949715 4950041 -61717964 + AluJb SINE Alu 1 312 0 2285 97 7 0 chr20 4951282 4951572 -61716433 + AluSx SINE Alu 1 292 -20 465 262 87 0 chr20 4951594 4951720 -61716285 + FRAM SINE Alu 9 145 -31 36 77 0 0 chr20 4951720 4951798 -61716207 + AT_rich Low_complexity Low_complexity 1 78 0 228 67 0 0 chr20 4951811 4951841 -61716164 + (A)n Simple_repeat Simple_repeat 1 30 0 1369 179 0 36 chr20 4951845 4952096 -61715909 + AluJo SINE Alu 47 288 -24 1788 175 0 38 chr20 4952222 4952542 -61715463 + AluJb SINE Alu 3 310 -2 804 201 106 0 chr20 4953769 4953958 -61714047 + MER3 DNA MER1_type 1 209 0 1995 114 0 89 chr20 4954068 4954393 -61713612 + AluSx SINE Alu 2 297 -15 962 200 118 0 chr20 4954947 4955142 -61712863 + MER20 DNA MER1_type 1 218 -1 2271 98 3 3 chr20 4955325 4955621 -61712384 + AluSq SINE Alu 1 296 -17 2600 69 0 0 chr20 4955651 4955957 -61712048 + AluY SINE Alu 1 306 -5 2514 48 0 26 chr20 4956262 4956575 -61711430 + AluY SINE Alu 1 305 -6 809 141 0 16 chr20 4957204 4957332 -61710673 - FLAM_A SINE Alu -7 126 1 307 261 23 0 chr20 4958331 4958419 -61709586 - MIR SINE MIR -121 141 52 1967 134 46 0 chr20 4958776 4959060 -61708945 - AluJb SINE Alu -12 300 4 2192 69 62 14 chr20 4959080 4959370 -61708635 - AluSp SINE Alu -9 304 1 761 177 39 0 chr20 4959706 4959836 -61708169 + AluJo SINE Alu 2 136 -176 441 210 134 8 chr20 4960343 4960462 -61707543 + MER58C DNA MER1_type 44 177 -38 369 336 43 26 chr20 4960497 4960729 -61707276 + L1M4 LINE L1 4372 4607 -1539 1705 173 14 7 chr20 4960780 4961064 -61706941 + AluJb SINE Alu 1 286 -26 1199 150 34 49 chr20 4961429 4961620 -61706385 + L1MB1 LINE L1 5837 6030 -138 2201 119 0 0 chr20 4961620 4961914 -61706091 + AluSx SINE Alu 2 295 -17 1199 150 34 49 chr20 4961914 4961984 -61706021 + L1MB1 LINE L1 6030 6100 -68 760 171 0 79 chr20 4961988 4962140 -61705865 + AluJo SINE Alu 2 141 -171 386 122 0 144 chr20 4962147 4962186 -61705819 + L1MB1 LINE L1 6093 6094 -74 1993 129 4 0 chr20 4962186 4962465 -61705540 + AluSx SINE Alu 21 300 -12 386 122 0 144 chr20 4962465 4962531 -61705474 + L1MB1 LINE L1 6094 6168 0 183 196 294 0 chr20 4963036 4963087 -61704918 - MER5B DNA MER1_type -111 67 2 189 0 0 0 chr20 4963120 4963141 -61704864 + (A)n Simple_repeat Simple_repeat 1 21 0 676 162 103 0 chr20 4963690 4963807 -61704198 + FLAM_C SINE Alu 2 130 -13 1886 163 0 23 chr20 4964131 4964437 -61703568 + AluJb SINE Alu 1 299 -13 622 228 123 78 chr20 4964448 4964861 -61703144 + L1ME3 LINE L1 5672 6103 -59 2353 97 0 0 chr20 4964983 4965282 -61702723 - AluSg1 SINE Alu -10 299 1 1601 146 103 0 chr20 4966039 4966329 -61701676 - AluJo SINE Alu 0 317 1 450 296 23 0 chr20 4966337 4966469 -61701536 - MER112 DNA MER1_type -11 249 115 21 0 0 0 chr20 4967714 4967735 -61700270 + AT_rich Low_complexity Low_complexity 1 21 0 361 204 83 0 chr20 4968328 4968417 -61699588 - MIR SINE MIR -60 148 95 2268 114 0 7 chr20 4969749 4970057 -61697948 + AluSx SINE Alu 1 306 -6 350 298 6 6 chr20 4970367 4970525 -61697480 + (CA)n Simple_repeat Simple_repeat 1 158 0 1115 214 53 29 chr20 4972275 4972556 -61695449 + L1MB7 LINE L1 5897 6184 0 2331 110 3 3 chr20 4972567 4972877 -61695128 + AluSx SINE Alu 1 310 -2 494 293 82 37 chr20 4972906 4973261 -61694744 + HAL1b LINE L1 204 574 -774 2228 99 21 0 chr20 4973488 4973771 -61694234 + AluSg SINE Alu 1 289 -21 2127 124 0 0 chr20 4973771 4974069 -61693936 + AluSc SINE Alu 1 298 -11 22 56 0 0 chr20 4974069 4974105 -61693900 + AT_rich Low_complexity Low_complexity 1 36 0 2055 153 7 0 chr20 4974352 4974660 -61693345 + AluSx SINE Alu 1 310 -2 2383 99 0 6 chr20 4975160 4975474 -61692531 + AluSx SINE Alu 1 312 0 1335 199 27 40 chr20 4975718 4976019 -61691986 + AluJo SINE Alu 5 301 -11 378 0 0 0 chr20 4976102 4976144 -61691861 + (CA)n Simple_repeat Simple_repeat 2 43 0 1659 178 7 7 chr20 4976252 4976539 -61691466 + AluJb SINE Alu 1 287 -25 439 223 46 23 chr20 4977396 4977529 -61690476 + MLT1J LTR MaLR 55 158 -292 2526 84 3 0 chr20 4977543 4977852 -61690153 - AluSp SINE Alu -3 310 1 1375 195 17 31 chr20 4977918 4978210 -61689795 + AluJo SINE Alu 1 288 -24 219 69 0 0 chr20 4978328 4978357 -61689648 + (A)n Simple_repeat Simple_repeat 1 29 0 2416 90 0 0 chr20 4978364 4978664 -61689341 + AluSx SINE Alu 1 300 -12 1015 128 0 0 chr20 4979332 4979473 -61688532 - AluJb SINE Alu -171 141 1 2330 92 3 29 chr20 4979674 4979980 -61688025 + AluSp SINE Alu 1 298 -15 1163 173 61 78 chr20 4979990 4980232 -61687773 + L1ME LINE L1 5448 5693 -473 1766 167 27 0 chr20 4980232 4980525 -61687480 - AluJb SINE Alu -1 311 11 1677 184 0 33 chr20 4980535 4980839 -61687166 - AluJo SINE Alu -18 294 1 1163 173 61 78 chr20 4980839 4980880 -61687125 + L1ME LINE L1 5702 5737 -429 416 317 53 18 chr20 4980941 4981168 -61686837 + L1ME LINE L1 5425 5659 -511 1553 92 114 4 chr20 4981841 4982069 -61685936 - AluY SINE Alu 0 311 59 2347 109 3 3 chr20 5033276 5033588 -61634417 + AluSx SINE Alu 1 312 0 487 293 82 37 chr20 5033617 5033972 -61634033 + HAL1b LINE L1 204 574 -774 2201 102 21 0 chr20 5034199 5034482 -61633523 + AluSg SINE Alu 1 289 -21 2144 121 0 0 chr20 5034482 5034780 -61633225 + AluSc SINE Alu 1 298 -11 22 56 0 0 chr20 5034780 5034816 -61633189 + AT_rich Low_complexity Low_complexity 1 36 0 2109 146 7 0 chr20 5035063 5035371 -61632634 + AluSx SINE Alu 1 310 -2 2372 102 0 6 chr20 5035871 5036185 -61631820 + AluSx SINE Alu 1 312 0 930 131 0 0 chr20 5036332 5036462 -61631543 + AluJb SINE Alu 12 141 -171 2381 90 0 3 chr20 5037130 5037431 -61630574 - AluSx SINE Alu -12 300 1 219 69 0 0 chr20 5037438 5037467 -61630538 + (T)n Simple_repeat Simple_repeat 1 29 0 1375 195 17 31 chr20 5037585 5037877 -61630128 - AluJo SINE Alu -24 288 1 2470 93 3 0 chr20 5037943 5038253 -61629752 + AluSp SINE Alu 1 311 -2 439 216 82 12 chr20 5038267 5038401 -61629604 - MLT1J LTR MaLR -292 158 55 1659 178 7 7 chr20 5039258 5039545 -61628460 - AluJb SINE Alu -25 287 1 288 0 0 0 chr20 5039653 5039685 -61628320 + (TG)n Simple_repeat Simple_repeat 2 33 0 1335 199 27 40 chr20 5039768 5040069 -61627936 - AluJo SINE Alu -11 301 5 1590 185 21 11 chr20 5040255 5040542 -61627463 + AluJo SINE Alu 1 290 -22 2022 102 48 27 chr20 5040553 5040846 -61627159 + AluSx SINE Alu 11 309 -3 277 258 93 57 chr20 5041404 5041598 -61626407 + HAL1 LINE L1 619 819 -1688 225 241 102 9 chr20 5041771 5041879 -61626126 + HAL1 LINE L1 1045 1162 -1345 287 226 71 0 chr20 5042431 5042515 -61625490 + L1ME3 LINE L1 5348 5437 -2371 * 852 181 72 175 chr20 5042493 5042846 -61625159 + L1MC4 LINE L1 7491 7772 -270 1937 138 10 21 chr20 5042846 5043137 -61624868 + AluSx SINE Alu 1 288 -24 852 181 72 175 chr20 5043137 5043314 -61624691 + L1MC4 LINE L1 7772 7966 -76 998 146 73 26 chr20 5043363 5043555 -61624450 - MER46A DNA MER2_type -22 214 14 743 75 0 0 chr20 5043856 5043950 -61624055 + AluSg/x SINE Alu 202 295 -17 463 143 0 0 chr20 5043950 5044020 -61623985 + L1MB1 LINE L1 6031 6100 -68 760 171 0 79 chr20 5044024 5044176 -61623829 + AluJo SINE Alu 2 141 -171 386 122 0 144 chr20 5044183 5044222 -61623783 + L1MB1 LINE L1 6093 6094 -74 1993 129 4 0 chr20 5044222 5044501 -61623504 + AluSx SINE Alu 21 300 -12 386 122 0 144 chr20 5044501 5044567 -61623438 + L1MB1 LINE L1 6094 6168 0 183 196 294 0 chr20 5045072 5045123 -61622882 - MER5B DNA MER1_type -111 67 2 189 0 0 0 chr20 5045156 5045177 -61622828 + (A)n Simple_repeat Simple_repeat 1 21 0 676 162 103 0 chr20 5045726 5045843 -61622162 + FLAM_C SINE Alu 2 130 -13 896 130 0 0 chr20 5046167 5046298 -61621707 + FLAM_C SINE Alu 1 131 -2 237 204 0 19 chr20 5046407 5046461 -61621544 + L1ME LINE L1 5662 5714 -645 1696 165 29 0 chr20 5046478 5046751 -61621254 - AluJb SINE Alu -21 291 11 1677 184 0 33 chr20 5046761 5047065 -61620940 - AluJo SINE Alu -18 294 1 301 103 29 11 chr20 5047067 5047126 -61620879 + L1ME LINE L1 5702 5740 -422 416 317 53 18 chr20 5047167 5047394 -61620611 + L1ME3 LINE L1 5425 5659 -511 2039 91 91 3 chr20 5048067 5048353 -61619652 - AluY SINE Alu 0 311 1 893 70 118 0 chr20 5048445 5048600 -61619405 - MER30 DNA MER1_type -35 195 1 278 256 37 12 chr20 5048967 5049049 -61618956 - L2 LINE L2 -1866 1448 1365 23 0 0 0 chr20 5049108 5049131 -61618874 + AT_rich Low_complexity Low_complexity 1 23 0 2210 87 10 7 chr20 5049689 5049977 -61618028 + AluSx SINE Alu 1 289 -23 405 186 0 3 chr20 5050522 5050598 -61617407 + AluS SINE Alu 1 59 -249 346 228 148 89 chr20 5050700 5051024 -61616981 + L1ME3 LINE L1 5761 6103 -59 2353 97 0 0 chr20 5051146 5051445 -61616560 - AluSg1 SINE Alu -10 299 1 1601 146 103 0 chr20 5052200 5052486 -61615519 - AluJo SINE Alu 0 313 1 450 296 23 0 chr20 5052494 5052626 -61615379 - MER112 DNA MER1_type -11 249 115 21 0 0 0 chr20 5053871 5053892 -61614113 + AT_rich Low_complexity Low_complexity 1 21 0 361 204 83 0 chr20 5054485 5054574 -61613431 - MIR SINE MIR -60 148 95 2268 114 0 7 chr20 5055906 5056214 -61611791 + AluSx SINE Alu 1 306 -6 350 298 6 6 chr20 5056524 5056682 -61611323 + (CA)n Simple_repeat Simple_repeat 1 158 0 349 162 29 29 chr20 5058432 5058500 -61609505 + L1MB5 LINE L1 5897 5964 -210 1632 151 50 4 chr20 5058607 5058865 -61609140 - AluJo SINE Alu -40 272 3 426 298 30 38 chr20 5058867 5059132 -61608873 + L1ME4a LINE L1 5556 5818 -303 1116 134 34 6 chr20 5059256 5059435 -61608570 + AluJb SINE Alu 129 312 0 228 133 67 0 chr20 5059436 5059481 -61608524 + GA-rich Low_complexity Low_complexity 3 50 0 349 205 256 0 chr20 5059482 5059599 -61608406 + L1ME4a LINE L1 5964 6110 -11 1550 189 27 30 chr20 5060062 5060257 -61607748 + AluJo SINE Alu 1 196 -116 2212 117 0 0 chr20 5060257 5060556 -61607449 + AluSx SINE Alu 1 299 -13 1550 189 27 30 chr20 5060556 5060656 -61607349 + AluJo SINE Alu 196 295 -17 1159 190 90 13 chr20 5060974 5061274 -61606731 + MER33 DNA MER1_type 1 323 -1 333 0 0 0 chr20 5061382 5061419 -61606586 + (CA)n Simple_repeat Simple_repeat 2 38 0 2221 109 0 13 chr20 5063282 5063586 -61604419 - AluSg SINE Alu -10 300 1 2250 118 0 6 chr20 5063639 5063954 -61604051 - AluSp SINE Alu 0 313 1 1137 162 0 0 chr20 5064146 5064313 -61603692 - FRAM SINE Alu -8 168 2 277 224 0 0 chr20 5064462 5064520 -61603485 + L1MC/D LINE L1 5696 5753 -2055 1767 189 0 13 chr20 5065016 5065329 -61602676 + AluJb SINE Alu 1 309 -3 1619 165 74 3 chr20 5065750 5065865 -61602140 + AluJb SINE Alu 1 106 -206 279 0 0 0 chr20 5065865 5065896 -61602109 + (CA)n Simple_repeat Simple_repeat 2 32 0 1619 165 74 3 chr20 5065896 5066065 -61601940 + AluJb SINE Alu 106 305 -7 1727 154 45 17 chr20 5066074 5066366 -61601639 + AluJb SINE Alu 1 300 -12 23 0 0 0 chr20 5066438 5066461 -61601544 + AT_rich Low_complexity Low_complexity 1 23 0 2087 111 13 13 chr20 5067138 5067445 -61600560 - AluSx SINE Alu -5 307 1 2386 78 16 3 chr20 5068750 5069059 -61598946 + AluSp SINE Alu 1 313 0 2359 88 7 0 chr20 5069351 5069648 -61598357 - AluSx SINE Alu -13 299 1 2263 118 0 0 chr20 5069937 5070243 -61597762 - AluSx SINE Alu -6 306 1 2443 85 0 0 chr20 5070409 5070715 -61597290 - AluY SINE Alu -5 306 1 2222 96 3 3 chr20 5070956 5071248 -61596757 + AluSx SINE Alu 1 292 -20 2201 100 3 17 chr20 5071256 5071557 -61596448 + AluSc SINE Alu 2 298 -11 1720 169 14 7 chr20 5072113 5072397 -61595608 - AluJb SINE Alu -26 286 1 369 336 43 26 chr20 5072448 5072680 -61595325 - L1M4 LINE L1 -1539 4607 4372 450 202 134 8 chr20 5072715 5072834 -61595171 - MER58C DNA MER1_type -38 177 44 761 177 39 0 chr20 5073341 5073471 -61594534 - AluJo SINE Alu -176 136 2 2192 69 62 14 chr20 5073807 5074097 -61593908 + AluSp SINE Alu 1 304 -9 1967 134 46 0 chr20 5074117 5074401 -61593604 + AluJb SINE Alu 4 300 -12 307 261 23 0 chr20 5074758 5074846 -61593159 + MIR SINE MIR 52 141 -121 809 141 0 16 chr20 5075845 5075973 -61592032 + FLAM_A SINE Alu 1 126 -7 2526 45 0 26 chr20 5076602 5076915 -61591090 - AluY SINE Alu -6 305 1 2584 72 0 0 chr20 5077220 5077526 -61590479 - AluY SINE Alu -5 306 1 2243 101 3 7 chr20 5077556 5077853 -61590152 - AluSq SINE Alu -17 296 1 962 200 118 0 chr20 5078036 5078231 -61589774 - MER20 DNA MER1_type -1 218 1 2001 114 0 86 chr20 5078785 5079109 -61588896 - AluSx SINE Alu -15 297 2 787 206 106 0 chr20 5079220 5079409 -61588596 - MER3 DNA MER1_type 0 209 1 1788 175 0 38 chr20 5080636 5080956 -61587049 - AluJb SINE Alu -2 310 3 1234 180 8 40 chr20 5081082 5081332 -61586673 - AluJo SINE Alu -24 288 47 46 83 0 0 chr20 5081339 5081448 -61586557 + AT_rich Low_complexity Low_complexity 1 109 0 465 262 87 0 chr20 5081448 5081574 -61586431 - FRAM SINE Alu -31 145 9 2199 94 14 0 chr20 5081596 5081884 -61586121 - AluSx SINE Alu -20 292 1 554 152 0 48 chr20 5081885 5081990 -61586015 + MER58C DNA MER1_type 108 207 -8 2422 57 7 0 chr20 5082520 5082876 -61585129 - AluSp SINE Alu 0 358 1 731 168 23 15 chr20 5082899 5083030 -61584975 - FLAM_C SINE Alu -1 132 1 2512 21 0 3 chr20 5084170 5084492 -61583513 - AluY SINE Alu 0 321 1 559 119 0 24 chr20 5084604 5084688 -61583317 - MER4A LTR ERV1 0 664 583 814 204 26 0 chr20 5084699 5084851 -61583154 + AluJb SINE Alu 134 289 -23 820 139 13 19 chr20 5085219 5085377 -61582628 + MER5A DNA MER1_type 1 157 -32 310 197 0 0 chr20 5085456 5085517 -61582488 + MER5A DNA MER1_type 41 101 -88 770 245 65 0 chr20 5088051 5088251 -61579754 + MER58A DNA MER1_type 1 213 -11 227 339 9 9 chr20 5088528 5088637 -61579368 + L2 LINE L2 2950 3058 -214 186 259 92 61 chr20 5088719 5088850 -61579155 - MER5A DNA MER1_type -22 167 33 2153 115 3 3 chr20 5090249 5090545 -61577460 + AluSx SINE Alu 1 296 -16 207 0 0 0 chr20 5090604 5090627 -61577378 + (TCCA)n Simple_repeat Simple_repeat 3 25 0 342 291 42 4 chr20 5090659 5090786 -61577219 + L1ME1 LINE L1 6046 6332 -2 234 286 155 43 chr20 5091604 5091638 -61576367 - MIR SINE MIR -60 202 173 1921 143 0 14 chr20 5091638 5091932 -61576073 - AluJo SINE Alu -22 290 1 234 286 155 43 chr20 5091932 5092058 -61575947 - MIR SINE MIR -89 173 24 1817 89 4 4 chr20 5092129 5092365 -61575640 - AluSq SINE Alu -77 236 1 234 245 115 108 chr20 5092703 5092949 -61575056 + L1MC4 LINE L1 7616 7866 -176 1919 129 3 3 chr20 5092949 5093243 -61574762 - AluJo SINE Alu -18 294 1 234 245 115 108 chr20 5093243 5093282 -61574723 + L1MC4 LINE L1 7866 7903 -139 195 42 0 0 chr20 5094124 5094148 -61573857 + (GGGAGA)n Simple_repeat Simple_repeat 5 28 0 193 167 185 19 chr20 5095474 5095528 -61572477 - MIR SINE MIR -61 147 85 1626 170 6 19 chr20 5099716 5100033 -61567972 - AluSq SINE Alu 0 313 1 335 298 118 32 chr20 5100159 5100505 -61567500 - L1M4 LINE L1 -2189 3957 3582 1725 162 28 0 chr20 5101881 5102165 -61565840 - AluJb SINE Alu -20 292 1 2322 196 110 46 chr20 5103741 5103876 -61564129 + MER77 LTR ERV1 1 126 -479 659 188 8 0 chr20 5103876 5103993 -61564012 + FLAM_C SINE Alu 1 118 -15 2322 196 110 46 chr20 5103993 5104422 -61563583 + MER77 LTR ERV1 126 601 -4 1983 132 24 0 chr20 5104702 5104997 -61563008 + AluSq SINE Alu 1 302 -11 700 267 114 0 chr20 5105598 5105774 -61562231 - MER58A DNA MER1_type -5 219 24 1429 129 0 22 chr20 5105973 5106198 -61561807 - AluSx SINE Alu -92 220 1 180 97 0 0 chr20 5107292 5107323 -61560682 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1532 171 25 25 chr20 5107325 5107605 -61560400 - AluJo SINE Alu -30 282 3 496 286 154 0 chr20 5107844 5108069 -61559936 - MIR SINE MIR -13 249 13 198 0 0 0 chr20 5108130 5108152 -61559853 + (A)n Simple_repeat Simple_repeat 1 22 0 293 243 90 28 chr20 5108919 5109054 -61558951 + L1ME4a LINE L1 5588 5734 -387 2199 105 0 10 chr20 5109054 5109390 -61558615 - AluSx SINE Alu 0 312 1 398 295 84 77 chr20 5109653 5110226 -61557779 + L1MC4a LINE L1 5257 5780 -341 1408 154 99 0 chr20 5110226 5110505 -61557500 + AluSx SINE Alu 5 308 0 398 295 84 77 chr20 5110505 5110550 -61557455 + L1MC4a LINE L1 5780 5823 -298 271 255 172 25 chr20 5110801 5110958 -61557047 + L1ME4a LINE L1 5941 6120 -1 209 358 0 0 chr20 5111026 5111093 -61556912 - MIR SINE MIR -122 140 74 2189 113 0 0 chr20 5111129 5111440 -61556565 + AluSx SINE Alu 1 311 -1 633 182 84 28 chr20 5111879 5112022 -61555983 + L1MB5 LINE L1 6024 6174 0 1686 140 142 11 chr20 5112132 5112450 -61555555 + MER47A DNA MER2_type 4 366 0 1133 289 70 47 chr20 5115313 5115442 -61552563 + L1MC4a LINE L1 5303 5428 -2380 2094 94 0 0 chr20 5115442 5115719 -61552286 + AluSx SINE Alu 1 277 -35 1133 289 70 47 chr20 5115719 5116161 -61551844 + L1MC4a LINE L1 5428 5887 -1921 1769 147 32 38 chr20 5116773 5117086 -61550919 + AluJb SINE Alu 1 311 -1 1857 125 10 17 chr20 5118009 5118306 -61549699 + AluSx SINE Alu 1 295 -17 180 0 0 0 chr20 5118307 5118327 -61549678 + (CA)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr20 5118556 5118584 -61549421 + AT_rich Low_complexity Low_complexity 1 28 0 833 122 0 0 chr20 5118588 5118703 -61549302 + FLAM_C SINE Alu 1 115 -28 318 26 0 0 chr20 5118706 5118745 -61549260 + (GGGA)n Simple_repeat Simple_repeat 4 42 0 204 292 266 18 chr20 5119878 5120104 -61547901 + L2 LINE L2 2538 2819 -495 592 267 106 48 chr20 5120136 5120370 -61547635 + L2 LINE L2 2951 3209 -104 1499 169 34 20 chr20 5120370 5120665 -61547340 + AluJo SINE Alu 1 299 -13 592 267 106 48 chr20 5120665 5120741 -61547264 + L2 LINE L2 3209 3279 -34 322 283 69 48 chr20 5120778 5120997 -61547008 + L2 LINE L2 3042 3272 0 207 69 0 0 chr20 5121968 5121997 -61546008 + (T)n Simple_repeat Simple_repeat 1 29 0 627 221 59 0 chr20 5122580 5122716 -61545289 + MER3 DNA MER1_type 66 209 0 1526 190 0 7 chr20 5123517 5123806 -61544199 - AluJo SINE Alu -25 287 1 1745 147 3 46 chr20 5124435 5124761 -61543244 + AluJb SINE Alu 1 312 0 1424 107 0 47 chr20 5126033 5126266 -61541739 + AluSg/x SINE Alu 85 306 -6 816 162 0 0 chr20 5126266 5126383 -61541622 - AluJo/FLAM SINE Alu -185 117 1 384 143 57 0 chr20 5126521 5126591 -61541414 + FLAM_A SINE Alu 60 133 0 2206 92 0 3 chr20 5127570 5127864 -61540141 + AluSg SINE Alu 14 306 -4 804 151 0 0 chr20 5127973 5128092 -61539913 + FLAM_C SINE Alu 7 125 -18 22 35 0 0 chr20 5128099 5128128 -61539877 + AT_rich Low_complexity Low_complexity 1 29 0 438 244 98 83 chr20 5128322 5128666 -61539339 + L1ME4a LINE L1 5132 5486 -692 525 230 155 24 chr20 5128771 5129062 -61538943 + L1ME4a LINE L1 5635 5963 -158 2084 110 7 7 chr20 5129067 5129376 -61538629 - AluSx SINE Alu -3 309 1 450 252 132 13 chr20 5129967 5130126 -61537879 + MER5B DNA MER1_type 1 178 0 189 0 0 0 chr20 5130207 5130228 -61537777 + (TCCC)n Simple_repeat Simple_repeat 4 24 0 1955 152 0 0 chr20 5130235 5130545 -61537460 - AluY SINE Alu -1 310 1 2217 87 0 0 chr20 5130547 5130835 -61537170 - AluSg SINE Alu -20 290 3 2680 173 46 82 chr20 5130971 5131368 -61536637 + L1MB7 LINE L1 4553 4963 -1190 2293 88 3 0 chr20 5131368 5131664 -61536341 + AluSp SINE Alu 1 297 -16 2680 173 46 82 chr20 5131664 5131909 -61536096 + L1MB7 LINE L1 4963 5215 -938 2310 76 3 0 chr20 5131909 5132210 -61535795 + AluY SINE Alu 1 302 -9 2680 173 46 82 chr20 5132210 5132231 -61535774 + L1MB7 LINE L1 5215 5235 -918 2264 67 3 0 chr20 5132231 5132515 -61535490 + AluSp SINE Alu 14 298 -15 2680 173 46 82 chr20 5132515 5132673 -61535332 + L1MB7 LINE L1 5235 5340 -813 701 175 58 7 chr20 5132679 5132816 -61535189 + FAM SINE Alu 14 157 -28 2355 68 3 0 chr20 5132816 5133111 -61534894 + AluY SINE Alu 1 296 -15 3313 165 122 37 chr20 5133133 5133400 -61534605 + L1MB7 LINE L1 5317 5560 -624 1965 134 0 3 chr20 5133400 5133699 -61534306 + AluSc SINE Alu 1 298 -11 3313 165 122 37 chr20 5133699 5133994 -61534011 + L1MB7 LINE L1 5560 5829 -355 2095 121 0 0 chr20 5133994 5134292 -61533713 - AluSx SINE Alu -14 298 1 3313 165 122 37 chr20 5134292 5134516 -61533489 + L1MB7 LINE L1 5829 6171 -13 689 159 48 8 chr20 5134730 5134856 -61533149 + FLAM_C SINE Alu 1 131 -2 1919 123 0 0 chr20 5134890 5135158 -61532847 - AluSq SINE Alu -45 268 1 432 55 0 0 chr20 5135178 5135233 -61532772 + (CA)n Simple_repeat Simple_repeat 2 56 0 2390 52 7 0 chr20 5136109 5136400 -61531605 + AluY SINE Alu 1 293 -18 2051 118 0 10 chr20 5136559 5136856 -61531149 + AluSq SINE Alu 1 294 -19 1764 114 21 21 chr20 5136862 5136998 -61531007 + AluSq SINE Alu 1 136 -177 2133 129 0 0 chr20 5136998 5137307 -61530698 + AluSc SINE Alu 1 309 0 1764 114 21 21 chr20 5137307 5137451 -61530554 + AluSq SINE Alu 135 281 -32 2241 85 7 13 chr20 5137497 5137803 -61530202 + AluSg SINE Alu 1 304 -6 1389 126 0 9 chr20 5137856 5138070 -61529935 - MER46B DNA MER2_type 0 236 25 838 241 19 0 chr20 5138070 5138228 -61529777 + AluJb SINE Alu 135 295 -17 648 134 228 0 chr20 5138228 5138355 -61529650 - MER46B DNA MER2_type -201 35 5 274 252 183 15 chr20 5138448 5138579 -61529426 + MLT1J1 LTR MaLR 33 185 -261 260 269 0 0 chr20 5138629 5138681 -61529324 + MLT1J2 LTR MaLR 280 331 -119 671 198 9 0 chr20 5138781 5138897 -61529108 + FLAM_C SINE Alu 2 118 -25 1888 135 3 10 chr20 5138902 5139214 -61528791 - AluSx SINE Alu -2 310 1 1689 122 48 10 chr20 5139242 5139537 -61528468 + AluSq SINE Alu 1 306 -7 1264 205 7 17 chr20 5139653 5139941 -61528064 - AluJo SINE Alu -16 296 12 2067 111 0 0 chr20 5139984 5140263 -61527742 + AluSg SINE Alu 1 279 -31 396 0 0 0 chr20 5140263 5140307 -61527698 + (CA)n Simple_repeat Simple_repeat 1 44 0 231 286 0 12 chr20 5140360 5140444 -61527561 + L1M4 LINE L1 4519 4601 -1545 1577 80 0 0 chr20 5140455 5140654 -61527351 + AluSg/x SINE Alu 86 284 -28 2249 88 3 7 chr20 5141046 5141352 -61526653 - AluSp SINE Alu -8 305 1 1019 154 0 154 chr20 5141426 5141539 -61526466 + MER46A DNA MER2_type 1 47 -2684 2065 75 0 91 chr20 5141539 5141870 -61526135 + AluY SINE Alu 1 301 -10 1019 154 0 154 chr20 5141870 5142035 -61525970 + MER46A DNA MER2_type 47 236 0 1377 127 79 89 chr20 5142342 5142633 -61525372 + AluJb SINE Alu 1 288 -24 251 94 0 0 chr20 5142696 5142728 -61525277 - MER58A DNA MER1_type -3 221 190 283 208 0 0 chr20 5142743 5142796 -61525209 - MER58A DNA MER1_type -15 92 40 * 440 236 0 0 chr20 5142795 5142884 -61525121 + MER5A DNA MER1_type 17 105 -84 1271 136 6 14 chr20 5143005 5143045 -61524960 + AluSq SINE Alu 134 173 -140 1984 113 78 0 chr20 5143045 5143328 -61524677 + AluSg SINE Alu 1 305 -5 1271 136 6 14 chr20 5143328 5143507 -61524498 + AluSq SINE Alu 173 313 0 324 357 40 20 chr20 5144229 5144428 -61523577 + MIR SINE MIR 27 229 -33 2399 110 0 0 chr20 5144948 5145258 -61522747 + AluSg SINE Alu 1 310 0 718 243 283 28 chr20 5145421 5146020 -61521985 + L2 LINE L2 2231 2676 -637 1262 201 67 62 chr20 5146020 5146177 -61521828 + MLT1B LTR MaLR 1 156 -234 1471 161 113 0 chr20 5146177 5146335 -61521670 - AluJb SINE Alu -20 292 95 216 0 0 0 chr20 5146335 5146359 -61521646 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1471 161 113 0 chr20 5146359 5146448 -61521557 - AluJb SINE Alu -217 95 17 1262 201 67 62 chr20 5146448 5146678 -61521327 + MLT1B LTR MaLR 156 390 0 718 243 283 28 chr20 5146678 5146891 -61521114 + L2 LINE L2 2676 3312 -1 2290 104 7 0 chr20 5147348 5147647 -61520358 - AluSx SINE Alu -11 301 1 942 140 0 7 chr20 5148099 5148235 -61519770 - FLAM_C SINE Alu -8 135 1 227 286 66 22 chr20 5148895 5148986 -61519019 - MIR SINE MIR -92 116 22 24 0 0 0 chr20 5149684 5149708 -61518297 + GC_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr20 5149742 5149777 -61518228 + GC_rich Low_complexity Low_complexity 1 35 0 32 111 0 0 chr20 5149798 5149942 -61518063 + GC_rich Low_complexity Low_complexity 1 144 0 24 32 0 0 chr20 5150050 5150081 -61517924 + GC_rich Low_complexity Low_complexity 1 31 0 218 186 0 86 chr20 5150094 5150164 -61517841 + C-rich Low_complexity Low_complexity 1 64 0 340 211 0 0 chr20 5150612 5150680 -61517325 - MER5A DNA MER1_type -81 101 32 406 259 41 41 chr20 5150731 5150901 -61517104 + MER5A DNA MER1_type 18 187 -2 * 904 178 0 6 chr20 5150754 5150917 -61517088 - MER5A DNA MER1_type -27 162 1 864 220 23 0 chr20 5151264 5151437 -61516568 - AluJb SINE Alu -2 310 134 533 119 0 24 chr20 5151448 5151532 -61516473 + MER4A LTR ERV1 583 664 0 2505 21 0 3 chr20 5151644 5151966 -61516039 + AluY SINE Alu 1 321 0 755 168 23 15 chr20 5153106 5153237 -61514768 + FLAM_C SINE Alu 1 132 -1 2427 57 7 0 chr20 5153260 5153612 -61514393 + AluSp SINE Alu 1 354 0 1368 118 3 132 chr20 5154142 5154248 -61513757 - MER58D DNA MER1_type -2042 378 260 2428 72 7 0 chr20 5154248 5154539 -61513466 + AluSq SINE Alu 1 293 -20 1368 118 3 132 chr20 5154539 5154630 -61513375 - MER58D DNA MER1_type -2160 260 243 2219 113 0 7 chr20 5154630 5154940 -61513065 - AluSg SINE Alu -2 308 1 1368 118 3 132 chr20 5154940 5155090 -61512915 - MER58D DNA MER1_type -2177 243 75 1776 124 97 0 chr20 5155090 5155383 -61512622 - AluSx SINE Alu 0 318 1 315 71 0 0 chr20 5155491 5155533 -61512472 + (TG)n Simple_repeat Simple_repeat 2 43 0 298 204 0 117 chr20 5155534 5155637 -61512368 + L1ME3A LINE L1 5688 5778 -2030 1413 151 34 50 chr20 5155747 5155791 -61512214 - L1MB8 LINE L1 -13 6167 6124 1976 174 0 0 chr20 5155791 5156102 -61511903 + AluSx SINE Alu 1 311 -1 1413 151 34 50 chr20 5156102 5156383 -61511622 - L1MB8 LINE L1 -56 6124 5851 276 155 0 13 chr20 5156389 5156417 -61511588 + Alu SINE Alu 247 247 -55 417 97 0 108 chr20 5156417 5156456 -61511549 - L1MB4 LINE L1 0 6180 6155 2429 91 0 0 chr20 5156456 5156752 -61511253 - AluSq SINE Alu -17 296 1 417 97 0 108 chr20 5156752 5156805 -61511200 - L1MB4 LINE L1 -25 6155 6098 276 155 0 13 chr20 5156805 5156841 -61511164 + Alu SINE Alu 247 282 -20 875 104 64 0 chr20 5157284 5157409 -61510596 - FLAM_C SINE Alu 0 133 1 363 358 64 9 chr20 5157460 5157790 -61510215 + L2 LINE L2 1758 2105 -1209 290 306 65 9 chr20 5158037 5158145 -61509860 + L2 LINE L2 3136 3249 -23 2476 156 105 49 chr20 5158287 5158356 -61509649 - MLT2B2 LTR ERVL 0 515 451 2651 43 0 0 chr20 5158356 5158656 -61509349 + AluY SINE Alu 1 300 -11 2476 156 105 49 chr20 5158656 5159072 -61508933 - MLT2B2 LTR ERVL -64 451 3 1472 190 11 7 chr20 5159150 5159283 -61508722 + AluJb SINE Alu 1 132 -180 2082 116 24 0 chr20 5159283 5159577 -61508428 + AluSq SINE Alu 1 301 -12 1472 190 11 7 chr20 5159577 5159722 -61508283 + AluJb SINE Alu 132 280 -32 858 126 0 0 chr20 5159727 5159862 -61508143 + (GGAA)n Simple_repeat Simple_repeat 4 138 0 207 0 0 0 chr20 5160051 5160074 -61507931 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 579 265 85 5 chr20 5160079 5160279 -61507726 + L1ME3A LINE L1 5935 6150 -20 2243 92 0 41 chr20 5160284 5160599 -61507406 - AluSq SINE Alu -9 304 3 391 279 19 51 chr20 5160832 5160990 -61507015 + MIR SINE MIR 60 212 -50 219 320 0 40 chr20 5161228 5161303 -61506702 - L2 LINE L2 -13 3259 3188 2321 108 3 6 chr20 5161312 5161626 -61506379 + AluSp SINE Alu 1 313 0 2355 101 0 0 chr20 5161632 5161929 -61506076 + AluSx SINE Alu 1 297 -15 370 150 17 0 chr20 5162459 5162519 -61505486 - AluJ/FLAM SINE Alu -241 61 1 610 280 134 18 chr20 5162671 5162966 -61505039 - L2 LINE L2 -246 3067 2727 1055 183 10 5 chr20 5162966 5163163 -61504842 - AluJo SINE Alu -11 301 104 236 158 0 92 chr20 5163183 5163221 -61504784 + A-rich Low_complexity Low_complexity 2 31 -39 2414 98 0 0 chr20 5163221 5163526 -61504479 + AluSc SINE Alu 1 305 -4 236 158 0 92 chr20 5163526 5163563 -61504442 + A-rich Low_complexity Low_complexity 31 70 0 722 118 0 96 chr20 5163573 5163709 -61504296 - FLAM_C SINE Alu -10 133 11 862 288 87 78 chr20 5163712 5163889 -61504116 - L2 LINE L2 -593 2721 2547 2458 68 3 10 chr20 5163889 5164196 -61503809 - AluY SINE Alu -6 305 1 2459 90 3 0 chr20 5164201 5164512 -61503493 - AluSx SINE Alu 0 312 1 862 288 87 78 chr20 5164512 5164533 -61503472 - L2 LINE L2 -770 2544 2525 2268 133 0 0 chr20 5164533 5164842 -61503163 + AluSx SINE Alu 1 309 -3 862 288 87 78 chr20 5164842 5165306 -61502699 - L2 LINE L2 -789 2525 2046 674 216 0 0 chr20 5165417 5165533 -61502472 + FLAM_C SINE Alu 1 116 -17 204 200 0 0 chr20 5165534 5165594 -61502411 + T-rich Low_complexity Low_complexity 1 60 0 2345 119 0 0 chr20 5165666 5165977 -61502028 + AluSx SINE Alu 1 311 -1 2221 121 7 0 chr20 5165977 5166282 -61501723 + AluSp SINE Alu 1 307 -6 320 247 14 0 chr20 5166282 5166355 -61501650 - LTR16A1 LTR ERVL -14 443 370 492 239 64 0 chr20 5166356 5166465 -61501540 - FLAM_C SINE Alu -24 119 4 916 184 19 6 chr20 5166539 5166697 -61501308 + FRAM SINE Alu 1 160 -16 441 272 45 75 chr20 5166706 5166971 -61501034 - LTR16A1 LTR ERVL -141 316 60 1703 136 0 32 chr20 5167071 5167322 -61500683 + AluSq SINE Alu 1 243 -70 343 212 0 59 chr20 5167459 5167544 -61500461 + MIR SINE MIR 77 156 -106 2018 132 28 0 chr20 5167563 5167850 -61500155 + AluSx SINE Alu 1 295 -17 646 179 37 49 chr20 5167877 5168039 -61499966 - MIR SINE MIR -11 251 92 1869 155 24 10 chr20 5168039 5168335 -61499670 + AluJb SINE Alu 6 305 -7 671 180 0 33 chr20 5168415 5168537 -61499468 + FLAM_C SINE Alu 1 118 -15 2377 108 0 0 chr20 5168744 5169050 -61498955 + AluSx SINE Alu 7 312 0 294 327 192 24 chr20 5169122 5169461 -61498544 - L2 LINE L2 0 3313 2918 519 241 21 7 chr20 5169820 5169961 -61498044 - L1ME3 LINE L1 -50 6112 5970 189 0 0 0 chr20 5169986 5170007 -61497998 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 741 68 0 0 chr20 5170033 5170121 -61497884 + AluSg SINE Alu 52 139 -171 2193 104 0 22 chr20 5170121 5170437 -61497568 + AluSc SINE Alu 1 309 0 1156 233 42 45 chr20 5170437 5170565 -61497440 - L1MC4 LINE L1 -228 7814 7687 2571 74 0 0 chr20 5170565 5170876 -61497129 - AluY SINE Alu 0 311 1 1156 233 42 45 chr20 5170876 5170982 -61497023 - L1MC4 LINE L1 -355 7687 7582 1926 154 30 7 chr20 5170982 5171287 -61496718 - AluJb SINE Alu 0 312 1 1156 233 42 45 chr20 5171287 5171451 -61496554 - L1MC4 LINE L1 -460 7582 7416 429 228 0 0 chr20 5171458 5171550 -61496455 - AluJ/FRAM SINE Alu 0 312 221 2288 105 20 0 chr20 5171583 5171887 -61496118 - AluSx SINE Alu 0 312 3 791 142 39 0 chr20 5171896 5172023 -61495982 - FLAM_C SINE Alu 0 133 2 4156 170 47 49 chr20 5172056 5172090 -61495915 - L1MB3 LINE L1 -1 6182 6149 2310 97 3 3 chr20 5172090 5172390 -61495615 - AluSq SINE Alu -13 300 1 4156 170 47 49 chr20 5172390 5173140 -61494865 - L1MB3 LINE L1 -34 6149 5399 2360 112 0 6 chr20 5173140 5173454 -61494551 - AluSx SINE Alu 0 312 1 4156 170 47 49 chr20 5173454 5173482 -61494523 - L1MB3 LINE L1 -784 5399 5372 1901 174 10 3 chr20 5173482 5173792 -61494213 + AluJb SINE Alu 1 312 0 4156 170 47 49 chr20 5173792 5173817 -61494188 - L1MB3 LINE L1 -811 5372 5348 776 131 54 31 chr20 5173817 5173947 -61494058 - FLAM_A SINE Alu 0 133 1 4156 170 47 49 chr20 5173947 5174117 -61493888 - L1MB3 LINE L1 -835 5348 5155 2197 107 7 3 chr20 5174128 5174419 -61493586 + AluSg SINE Alu 1 292 -18 733 68 34 59 chr20 5174419 5174528 -61493477 - AluJo/FRAM SINE Alu -21 291 184 690 13 0 0 chr20 5174534 5174613 -61493392 + (TTTTC)n Simple_repeat Simple_repeat 2 80 0 981 185 0 0 chr20 5174615 5174772 -61493233 - AluJb SINE Alu -31 281 125 400 256 47 0 chr20 5174782 5174868 -61493137 + L1MC4 LINE L1 6614 6703 -1339 745 156 62 8 chr20 5174869 5174997 -61493008 - AluJb SINE Alu -176 136 2 281 79 0 0 chr20 5175023 5175061 -61492944 - MER4D LTR ERV1 -74 798 761 1454 209 38 3 chr20 5175070 5175409 -61492596 - L1M4 LINE L1 -950 5196 4846 441 36 0 0 chr20 5175411 5175466 -61492539 + (TCTCCC)n Simple_repeat Simple_repeat 1 55 0 5563 79 39 9 chr20 5175466 5176252 -61491753 + SVA Other Other 57 866 -520 6765 66 34 28 chr20 5176267 5177219 -61490786 + SVA Other Other 430 1386 0 938 204 0 0 chr20 5177231 5177417 -61490588 - L1M4 LINE L1 -1287 4859 4674 2284 131 0 0 chr20 5177666 5177978 -61490027 + AluSx SINE Alu 1 312 0 2125 102 3 31 chr20 5178215 5178540 -61489465 + AluSp SINE Alu 1 317 0 727 183 21 14 chr20 5178732 5178874 -61489131 + FRAM SINE Alu 26 168 -8 831 254 26 29 chr20 5179124 5179396 -61488609 + LTR16C LTR ERVL 213 483 -8 356 234 39 39 chr20 5179406 5179488 -61488517 - L1MC4a LINE L1 -1902 5906 5822 2117 136 3 0 chr20 5179488 5179782 -61488223 - AluJb SINE Alu -4 308 14 356 234 39 39 chr20 5179782 5179827 -61488178 - L1MC4a LINE L1 -1985 5823 5779 215 225 0 0 chr20 5180079 5180119 -61487886 + CT-rich Low_complexity Low_complexity 4 43 0 300 231 0 44 chr20 5180200 5180291 -61487714 + Charlie8 DNA MER1_type 75 161 -2256 2079 98 0 52 chr20 5180335 5180641 -61487364 + AluSq SINE Alu 1 290 -23 2179 121 0 13 chr20 5180861 5181029 -61486976 - AluSx SINE Alu -11 301 137 2429 91 0 13 chr20 5181029 5181336 -61486669 - AluSx SINE Alu -9 303 1 2179 121 0 13 chr20 5181336 5181472 -61486533 - AluSx SINE Alu -175 137 1 711 207 0 0 chr20 5181515 5181636 -61486369 + FRAM SINE Alu 25 145 -31 1383 85 0 0 chr20 5181637 5181801 -61486204 - AluSp SINE Alu -14 299 136 201 147 0 0 chr20 5181814 5181848 -61486157 + (CAA)n Simple_repeat Simple_repeat 2 35 0 622 167 28 0 chr20 5181848 5181956 -61486049 - MER5A DNA MER1_type -75 114 4 253 118 0 0 chr20 5182331 5182365 -61485640 - MIR SINE MIR -150 112 79 1297 165 180 19 chr20 5182532 5182646 -61485359 + AluJo SINE Alu 1 95 -217 2256 136 0 0 chr20 5182646 5182955 -61485050 + AluSx SINE Alu 1 309 -3 1297 165 180 19 chr20 5182955 5183107 -61484898 + AluJo SINE Alu 95 310 -2 2257 115 0 0 chr20 5183556 5183852 -61484153 - AluSx SINE Alu -16 296 1 1652 188 20 3 chr20 5183861 5184153 -61483852 - AluJo SINE Alu -15 297 1 1626 180 6 60 chr20 5184165 5184481 -61483524 - AluJb SINE Alu -13 299 1 2284 107 10 13 chr20 5184517 5184826 -61483179 - AluSc SINE Alu 0 309 2 839 258 80 103 chr20 5185044 5185120 -61482885 + L1ME2 LINE L1 3375 3451 -2695 1664 93 14 0 chr20 5185120 5185336 -61482669 + AluSq SINE Alu 1 219 -94 839 258 80 103 chr20 5185336 5185744 -61482261 + L1ME2 LINE L1 3451 3848 -2298 673 86 0 32 chr20 5185748 5185841 -61482164 + AluSg/x SINE Alu 157 246 -63 1228 157 32 9 chr20 5185842 5185875 -61482130 + AluSg/x SINE Alu 83 114 -196 222 37 0 0 chr20 5185875 5185902 -61482103 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 1228 157 32 9 chr20 5185902 5186084 -61481921 + AluSg/x SINE Alu 114 303 -7 2274 113 7 0 chr20 5186088 5186398 -61481607 + AluSq SINE Alu 1 312 -1 408 73 0 0 chr20 5186399 5186467 -61481538 + AluSp/q SINE Alu 246 313 0 402 267 26 35 chr20 5186469 5186585 -61481420 + L1ME2 LINE L1 5152 5266 -880 180 0 0 0 chr20 5186593 5186613 -61481392 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2340 94 17 0 chr20 5186642 5186939 -61481066 + AluSq SINE Alu 1 302 -11 252 267 88 13 chr20 5186965 5187167 -61480838 + L1ME2 LINE L1 5272 5485 -677 1952 147 0 66 chr20 5187193 5187326 -61480679 + AluJb SINE Alu 1 141 -171 1923 134 14 3 chr20 5187326 5187617 -61480388 - AluSx SINE Alu -17 295 2 1952 147 0 66 chr20 5187617 5187816 -61480189 + AluJb SINE Alu 141 311 -1 278 231 39 0 chr20 5187824 5187902 -61480103 - MLT1L LTR MaLR -13 602 522 825 205 12 6 chr20 5187908 5188074 -61479931 + AluJb SINE Alu 137 303 -9 644 303 59 28 chr20 5188543 5188595 -61479410 + L1ME2 LINE L1 5482 5531 -633 1995 148 10 3 chr20 5188595 5188893 -61479112 + AluJb SINE Alu 6 305 -7 849 119 0 37 chr20 5188897 5189031 -61478974 + FLAM_C SINE Alu 1 129 -4 644 303 59 28 chr20 5189031 5189428 -61478577 + L1ME2 LINE L1 5533 5931 -233 2061 142 3 3 chr20 5189606 5189909 -61478096 + AluSx SINE Alu 1 303 -9 488 253 177 0 chr20 5190064 5190222 -61477783 - MER5A DNA MER1_type 0 189 4 1672 65 28 0 chr20 5190485 5190700 -61477305 - AluSg/x SINE Alu -8 302 82 2435 75 6 40 chr20 5190795 5191117 -61476888 - AluSq SINE Alu -2 311 1 1086 98 0 0 chr20 5191120 5191252 -61476753 - AluSp SINE Alu -181 132 1 1899 166 13 0 chr20 5191351 5191652 -61476353 - AluJb SINE Alu -7 305 1 1777 174 13 23 chr20 5192177 5192481 -61475524 - AluJb SINE Alu -11 301 1 586 274 208 0 chr20 5192570 5192782 -61475223 + MIR SINE MIR 4 259 -3 457 279 104 13 chr20 5192787 5192941 -61475064 + MER5B DNA MER1_type 9 176 -2 2003 136 3 32 chr20 5192980 5193290 -61474715 - AluSq SINE Alu -12 301 1 2229 101 28 0 chr20 5193675 5193962 -61474043 + AluSg1 SINE Alu 1 295 -14 2298 93 0 7 chr20 5193983 5194283 -61473722 + AluSx SINE Alu 1 298 -14 3033 187 45 77 chr20 5194433 5195048 -61472957 + L1 LINE L1 3842 4424 -1722 2192 108 3 0 chr20 5195048 5195353 -61472652 + AluSp SINE Alu 1 306 -7 3033 187 45 77 chr20 5195353 5195580 -61472425 + L1 LINE L1 4424 4657 -1489 1083 107 0 47 chr20 5195755 5195924 -61472081 - AluSg/x SINE Alu -18 294 134 2010 94 40 0 chr20 5195924 5196199 -61471806 - AluSq SINE Alu -14 299 14 24 0 0 0 chr20 5196270 5196294 -61471711 + AT_rich Low_complexity Low_complexity 1 24 0 321 156 0 31 chr20 5196297 5196361 -61471644 - FRAM SINE Alu -67 99 38 387 220 2 2 chr20 5196365 5196442 -61471563 + AluJ/FLAM SINE Alu 2 66 -236 738 165 0 24 chr20 5196443 5196570 -61471435 + AluJo/FRAM SINE Alu 164 287 -25 389 152 0 0 chr20 5196595 5196661 -61471344 + FAM SINE Alu 114 179 0 238 65 22 22 chr20 5196697 5196743 -61471262 + (TAAAAA)n Simple_repeat Simple_repeat 5 50 0 1677 147 28 3 chr20 5196780 5197065 -61470940 - AluSx SINE Alu -18 294 3 313 223 80 63 chr20 5197165 5197340 -61470665 - L1MC4a LINE L1 -1788 6020 5843 1721 134 11 0 chr20 5197382 5197651 -61470354 - AluSx SINE Alu -5 307 36 290 266 64 18 chr20 5197689 5197798 -61470207 - HAL1b LINE L1 -776 572 459 305 278 93 96 chr20 5197802 5197908 -61470097 - HAL1b LINE L1 -931 417 312 1610 133 28 0 chr20 5197908 5198156 -61469849 - AluSx SINE Alu -11 301 47 305 278 93 96 chr20 5198156 5198319 -61469686 - HAL1b LINE L1 -1036 312 149 270 222 62 25 chr20 5198381 5198462 -61469543 - MLT1J LTR MaLR -35 476 393 706 119 336 0 chr20 5198994 5199137 -61468868 - AluSg/x SINE Alu -1 311 121 567 97 0 21 chr20 5199153 5199246 -61468759 - Alu SINE Alu 0 311 221 303 53 0 0 chr20 5199248 5199286 -61468719 - AluSq SINE Alu -132 171 134 2087 120 0 0 chr20 5199286 5199645 -61468360 - AluSg SINE Alu 0 310 1 2041 125 17 0 chr20 5199661 5199956 -61468049 - AluSx SINE Alu -12 300 1 737 208 100 50 chr20 5199986 5200227 -61467778 + MER63C DNA MER1_type 263 515 -415 378 143 48 0 chr20 5200220 5200283 -61467722 - AluJ/FRAM SINE Alu -8 294 229 * 855 161 0 0 chr20 5200283 5200420 -61467585 + AluSp/q SINE Alu 161 297 -16 620 215 29 67 chr20 5200420 5200483 -61467522 - MER63C DNA MER1_type -729 201 137 1227 164 97 53 chr20 5200483 5200686 -61467319 + AluJb SINE Alu 1 223 -89 2106 81 3 55 chr20 5200686 5200994 -61467011 + AluSp SINE Alu 1 292 -21 1227 164 97 53 chr20 5200994 5201089 -61466916 + AluJb SINE Alu 223 312 0 620 215 29 67 chr20 5201089 5201234 -61466771 - MER63C DNA MER1_type -793 137 1 264 30 0 0 chr20 5201302 5201335 -61466670 + (TG)n Simple_repeat Simple_repeat 2 34 0 776 204 0 0 chr20 5201335 5201472 -61466533 - AluJb SINE Alu -12 300 164 1637 96 5 0 chr20 5201472 5201692 -61466313 - AluSg/x SINE Alu -26 286 66 419 208 127 58 chr20 5201728 5201901 -61466104 + L2 LINE L2 2533 2717 -597 863 171 7 0 chr20 5201904 5202050 -61465955 + FRAM SINE Alu 1 146 -30 3368 102 22 0 chr20 5202056 5202517 -61465488 + MER11B LTR ERVK 1 471 -765 1098 123 6 28 chr20 5202573 5202752 -61465253 + MLT1B LTR MaLR 1 175 -215 1331 164 0 17 chr20 5202757 5202989 -61465016 + AluJo SINE Alu 1 228 -84 2060 122 30 0 chr20 5203001 5203305 -61464700 + AluSq SINE Alu 1 313 0 1431 121 22 9 chr20 5203305 5203518 -61464487 + MLT1B LTR MaLR 172 390 0 249 178 0 0 chr20 5203522 5203567 -61464438 + L2 LINE L2 2744 2788 -526 1013 90 0 0 chr20 5204210 5204343 -61463662 + AluSq/x SINE Alu 1 133 -180 1386 145 37 0 chr20 5204348 5204562 -61463443 + AluSg/x SINE Alu 81 302 -8 1820 234 38 20 chr20 5204564 5204607 -61463398 + LTR16A1 LTR ERVL 1 42 -415 1951 133 24 87 chr20 5204607 5204926 -61463079 - MLT1B LTR MaLR 0 390 101 2341 80 0 0 chr20 5204926 5205237 -61462768 + AluY SINE Alu 1 311 0 1951 133 24 87 chr20 5205237 5205330 -61462675 - MLT1B LTR MaLR -289 101 4 1820 234 38 20 chr20 5205330 5205735 -61462270 + LTR16A1 LTR ERVL 42 457 0 381 179 0 0 chr20 5205735 5205802 -61462203 - AluJ/FRAM SINE Alu -3 299 233 372 306 10 97 chr20 5205802 5205882 -61462123 + L3 LINE CR1 664 749 -828 764 134 118 0 chr20 5205882 5206001 -61462004 + FLAM_C SINE Alu 1 133 0 372 306 10 97 chr20 5206001 5206116 -61461889 + L3 LINE CR1 749 842 -735 2014 103 21 4 chr20 5206121 5206424 -61461581 - AluSq SINE Alu 0 308 1 1980 134 7 0 chr20 5206525 5206816 -61461189 - AluSx SINE Alu -18 294 2 1005 162 0 57 chr20 5207252 5207480 -61460525 + AluJo SINE Alu 1 215 -97 330 210 12 0 chr20 5207608 5207689 -61460316 - MLT1I LTR MaLR -4 405 324 617 165 9 0 chr20 5207695 5207804 -61460201 - AluJb SINE Alu -1 311 202 1304 173 54 30 chr20 5208152 5208306 -61459699 - AluJo SINE Alu -10 302 153 2090 107 26 13 chr20 5208306 5208614 -61459391 - AluSx SINE Alu 0 312 1 1304 173 54 30 chr20 5208614 5208754 -61459251 - AluJo SINE Alu -159 153 1 615 270 86 51 chr20 5208816 5208875 -61459130 - L1ME3A LINE L1 -220 5950 5895 2101 135 0 0 chr20 5208875 5209179 -61458826 - AluSx SINE Alu -8 304 1 615 270 86 51 chr20 5209179 5209585 -61458420 - L1ME3A LINE L1 -275 5895 5447 542 200 11 0 chr20 5209790 5209885 -61458120 - MER117 DNA MER1_type -42 155 60 533 213 11 0 chr20 5209895 5209989 -61458016 + MER5A DNA MER1_type 9 103 -86 491 338 18 31 chr20 5210101 5210329 -61457676 + L3 LINE CR1 594 818 -759 2220 95 3 7 chr20 5210481 5210785 -61457220 + AluSq SINE Alu 1 303 -10 884 132 0 22 chr20 5210796 5210932 -61457073 + FLAM_C SINE Alu 1 133 0 1695 157 0 24 chr20 5211016 5211303 -61456702 + AluJb SINE Alu 1 280 -32 203 0 37 0 chr20 5211303 5211330 -61456675 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 285 251 164 47 chr20 5211446 5211617 -61456388 + L3 LINE CR1 967 1157 -420 2139 119 0 3 chr20 5211820 5212131 -61455874 - AluSx SINE Alu -2 310 1 278 367 0 0 chr20 5212138 5212236 -61455769 + L3 LINE CR1 1254 1351 -226 432 282 60 45 chr20 5212282 5212526 -61455479 + L1M4 LINE L1 2783 3022 -3124 2118 119 0 3 chr20 5212526 5212829 -61455176 + AluSx SINE Alu 1 302 -10 2243 82 3 0 chr20 5212837 5213131 -61454874 + AluSp SINE Alu 1 295 -18 432 282 60 45 chr20 5213131 5213426 -61454579 + L1M4 LINE L1 3028 3339 -2807 853 149 0 8 chr20 5213431 5213565 -61454440 + FLAM_C SINE Alu 1 133 -10 241 188 0 0 chr20 5213582 5213630 -61454375 + L1M LINE L1 5346 5393 -787 212 264 58 97 chr20 5213631 5213680 -61454325 + L3 LINE CR1 1338 1387 -190 811 147 16 8 chr20 5213680 5213809 -61454196 + FLAM_C SINE Alu 2 131 -2 212 264 58 97 chr20 5213809 5213914 -61454091 + L3 LINE CR1 1387 1486 -91 2153 83 17 20 chr20 5214932 5215232 -61452773 + AluSx SINE Alu 3 301 -11 655 305 121 23 chr20 5215512 5215860 -61452145 - LTR16C LTR ERVL -1 490 109 450 0 0 0 chr20 5215953 5216003 -61452002 + (TA)n Simple_repeat Simple_repeat 2 51 0 2015 107 11 0 chr20 5216003 5216283 -61451722 - AluSg SINE Alu -27 283 1 1704 158 10 30 chr20 5216305 5216608 -61451397 - AluJb SINE Alu -15 297 1 534 193 39 180 chr20 5216681 5216870 -61451135 - MLT1J LTR MaLR -243 268 138 2043 138 29 35 chr20 5216870 5217246 -61450759 - THE1C LTR MaLR -1 374 1 534 193 39 180 chr20 5217246 5217367 -61450638 - MLT1J LTR MaLR -373 138 2 274 133 0 33 chr20 5218184 5218244 -61449761 + (TTCCC)n Simple_repeat Simple_repeat 1 58 0 1991 137 7 0 chr20 5218244 5218551 -61449454 - AluSx SINE Alu -2 310 2 728 264 127 75 chr20 5218555 5219020 -61448985 + MLT1H1 LTR MaLR 65 553 -2 720 209 16 0 chr20 5219312 5219441 -61448564 - AluJb SINE Alu -13 299 169 2259 80 7 0 chr20 5219885 5220187 -61447818 + AluSq SINE Alu 1 304 -9 1973 112 10 36 chr20 5220289 5220593 -61447412 - AluSx SINE Alu -16 296 1 1579 171 3 30 chr20 5220593 5220898 -61447107 - AluJo SINE Alu -15 297 1 2319 87 0 0 chr20 5221109 5221418 -61446587 + AluSx SINE Alu 1 309 -3 511 263 119 34 chr20 5221482 5221718 -61446287 - LTR16C LTR ERVL -3 488 233 480 188 10 20 chr20 5222261 5222362 -61445643 + MER34C LTR ERV1 37 136 -449 2368 144 37 0 chr20 5222384 5222767 -61445238 - MSTB LTR MaLR -29 397 1 758 225 81 101 chr20 5222767 5223198 -61444807 + MER34 LTR ERV1 100 521 -21 810 165 8 0 chr20 5223199 5223332 -61444673 + AluJo SINE Alu 1 134 -178 754 176 7 29 chr20 5223369 5223505 -61444500 - FLAM_C SINE Alu 0 133 1 2322 84 3 0 chr20 5223609 5223907 -61444098 - AluSp SINE Alu -14 299 1 2079 115 0 10 chr20 5223984 5224298 -61443707 + AluSx SINE Alu 1 311 -1 1585 144 8 19 chr20 5224400 5224664 -61443341 + AluJb SINE Alu 35 295 -17 2103 104 10 3 chr20 5224801 5225110 -61442895 + AluSx SINE Alu 1 311 -1 2279 102 0 0 chr20 5225216 5225520 -61442485 - AluSx SINE Alu -8 304 1 1881 137 0 7 chr20 5225566 5225875 -61442130 + AluJo SINE Alu 1 307 0 337 276 35 0 chr20 5225877 5225964 -61442041 - L2 LINE L2 -14 3299 3210 921 100 46 0 chr20 5225965 5226095 -61441910 + AluSq/x SINE Alu 1 136 -176 1885 144 3 0 chr20 5226096 5226387 -61441618 + AluSx SINE Alu 3 294 -18 279 311 61 30 chr20 5226387 5226519 -61441486 - L2 LINE L2 -94 3219 3084 999 169 0 45 chr20 5226693 5226871 -61441134 + MER45A DNA AcHobo 8 177 -1 641 248 64 5 chr20 5227015 5227311 -61440694 - MLT1I LTR MaLR 0 409 52 892 146 0 14 chr20 5227341 5227485 -61440520 - AluJb SINE Alu -23 289 148 433 244 87 74 chr20 5227511 5227697 -61440308 - L1M4 LINE L1 -1219 4927 4745 761 177 8 0 chr20 5227697 5227827 -61440178 - FLAM_A SINE Alu 0 133 3 433 244 87 74 chr20 5227827 5228030 -61439975 - L1M4 LINE L1 -1401 4745 4533 845 162 101 0 chr20 5228034 5228182 -61439823 - FRAM SINE Alu -3 163 1 1105 167 0 0 chr20 5228291 5228477 -61439528 - AluJb SINE Alu -6 306 121 337 327 137 24 chr20 5228599 5228767 -61439238 - L1M4 LINE L1 -1717 4429 4243 1653 138 98 0 chr20 5229106 5229382 -61438623 - AluSx SINE Alu -9 303 1 549 262 283 0 chr20 5229437 5229681 -61438324 + MER5C DNA MER1_type 11 323 -1 1950 105 38 42 chr20 5230404 5230717 -61437288 - AluSx SINE Alu 0 312 1 1138 165 0 0 chr20 5230775 5230963 -61437042 - AluJb SINE Alu -4 308 121 1993 128 0 7 chr20 5230988 5231286 -61436719 - AluSx SINE Alu -16 296 1 2281 94 0 0 chr20 5231462 5231770 -61436235 - AluSq SINE Alu -5 308 1 198 0 0 0 chr20 5231828 5231850 -61436155 + (T)n Simple_repeat Simple_repeat 1 22 0 446 115 52 62 chr20 5231850 5231946 -61436059 - LTR9 LTR ERV1 -86 526 432 356 186 0 35 chr20 5231972 5232058 -61435947 - L1M4 LINE L1 -2196 3950 3868 343 338 40 59 chr20 5232113 5232391 -61435614 - L1M4 LINE L1 -2368 3778 3496 2397 133 2 84 chr20 5232391 5232769 -61435236 - L1PA15 LINE L1 -2 6163 5756 2267 89 0 0 chr20 5232769 5233061 -61434944 - AluSg SINE Alu -15 295 4 2397 133 2 84 chr20 5233061 5233074 -61434931 - L1PA15 LINE L1 -409 5756 5810 2192 103 3 0 chr20 5233074 5233376 -61434629 - AluSx SINE Alu -9 303 1 2397 133 2 84 chr20 5233376 5233434 -61434571 - L1PA15 LINE L1 -354 5811 5750 343 338 40 59 chr20 5233434 5233569 -61434436 - L1M4 LINE L1 -2650 3496 3376 2175 117 10 0 chr20 5233819 5234128 -61433877 - AluSx SINE Alu 0 312 1 966 91 15 15 chr20 5234656 5234788 -61433217 + FLAM_C SINE Alu 2 133 0 2240 96 0 3 chr20 5234798 5235110 -61432895 + AluSx SINE Alu 1 311 -1 1027 190 0 0 chr20 5235235 5235409 -61432596 - AluJb SINE Alu -5 307 134 1703 179 3 0 chr20 5235409 5235716 -61432289 - AluJo SINE Alu -4 308 1 442 158 118 0 chr20 5236044 5236120 -61431885 - AluSg/x SINE Alu -19 290 206 198 0 0 0 chr20 5236239 5236261 -61431744 + (T)n Simple_repeat Simple_repeat 1 22 0 1214 131 0 0 chr20 5236360 5236535 -61431470 - AluSx SINE Alu -137 175 1 2293 93 0 0 chr20 5236569 5236871 -61431134 + AluSx SINE Alu 1 302 -10 405 133 0 17 chr20 5237035 5237095 -61430910 - AluJ/FLAM SINE Alu -249 63 5 1338 156 31 35 chr20 5237099 5237356 -61430649 - AluJo SINE Alu -56 256 1 258 178 0 0 chr20 5237475 5237520 -61430485 - L2 LINE L2 -605 2709 2665 2075 121 0 3 chr20 5237635 5237941 -61430064 + AluY SINE Alu 1 305 -6 1960 152 0 3 chr20 5237960 5238269 -61429736 + AluSx SINE Alu 1 308 -4 1700 96 69 4 chr20 5238296 5238578 -61429427 + AluSx SINE Alu 7 305 0 934 218 131 33 chr20 5238580 5239007 -61428998 + HAL1 LINE L1 1103 1571 -936 1059 281 67 17 chr20 5239077 5239553 -61428452 + HAL1 LINE L1 1958 2457 -50 1043 159 11 0 chr20 5239553 5239729 -61428276 - AluJo SINE Alu -22 290 113 2009 112 35 0 chr20 5239766 5240053 -61427952 - AluSp SINE Alu -16 297 1 479 177 0 13 chr20 5240073 5240152 -61427853 + MER2 DNA MER2_type 268 345 0 2380 161 53 95 chr20 5240926 5240978 -61427027 + L1 LINE L1 3827 3880 -2266 2263 74 10 0 chr20 5240978 5241275 -61426730 + AluSp SINE Alu 1 300 -13 2380 161 53 95 chr20 5241275 5241786 -61426219 + L1 LINE L1 3880 4411 -1735 1716 153 37 0 chr20 5241786 5242080 -61425925 - AluJb SINE Alu -4 308 4 1897 130 3 7 chr20 5242081 5242380 -61425625 - AluSx SINE Alu -14 298 1 2380 161 53 95 chr20 5242380 5242457 -61425548 + L1 LINE L1 4410 4443 -1703 2191 97 0 16 chr20 5242489 5242799 -61425206 - AluSg SINE Alu -5 305 1 1214 184 68 43 chr20 5242799 5242969 -61425036 - AluJo SINE Alu -15 287 106 2196 96 7 0 chr20 5242969 5243271 -61424734 + AluSg SINE Alu 1 304 -6 1214 184 68 43 chr20 5243271 5243378 -61424627 - AluJo SINE Alu -196 106 3 393 289 147 19 chr20 5244226 5244382 -61423623 - MER5A DNA MER1_type 0 189 14 439 200 78 17 chr20 5244813 5244928 -61423077 - MIR SINE MIR -24 238 117 187 237 303 0 chr20 5245370 5245446 -61422559 - L2 LINE L2 -5 3267 3169 334 280 49 21 chr20 5245814 5245957 -61422048 + L3 LINE CR1 1112 1258 -319 1947 97 100 0 chr20 5246173 5246452 -61421553 - AluSx SINE Alu -5 307 1 2313 92 13 0 chr20 5246512 5246817 -61421188 - AluSp SINE Alu -4 309 1 636 124 0 0 chr20 5246929 5247018 -61420987 - 5S rRNA rRNA -31 90 2 201 345 26 9 chr20 5247018 5247131 -61420874 + L3 LINE CR1 1284 1398 -179 832 218 0 0 chr20 5247587 5247804 -61420201 + FRAM SINE Alu 1 81 0 732 237 167 31 chr20 5248002 5248289 -61419716 + L2 LINE L2 2135 2460 -854 23 33 0 0 chr20 5248929 5248959 -61419046 + AT_rich Low_complexity Low_complexity 1 30 0 230 210 24 99 chr20 5249798 5249931 -61418074 - L1M3 LINE L1 -367 5813 5689 1805 176 3 25 chr20 5249951 5250270 -61417735 - AluJo SINE Alu 0 312 1 2427 181 25 23 chr20 5250804 5250951 -61417054 + L1MA3 LINE L1 3423 3568 -2578 1857 171 7 0 chr20 5250951 5251255 -61416750 + AluJb SINE Alu 1 306 -6 2427 181 25 23 chr20 5251255 5251625 -61416380 + L1MA3 LINE L1 3568 3941 -2205 1308 127 97 158 chr20 5251626 5251726 -61416279 + AluJb SINE Alu 3 107 -205 1531 184 0 8 chr20 5251726 5251976 -61416029 + AluJo SINE Alu 5 252 -60 1308 127 97 158 chr20 5251976 5252205 -61415800 + AluJb SINE Alu 107 312 0 5884 104 73 64 chr20 5252209 5252784 -61415221 + L1MA3 LINE L1 4873 5441 -864 882 93 0 0 chr20 5252784 5252902 -61415103 - FLAM_C SINE Alu -15 118 1 5884 104 73 64 chr20 5252902 5253545 -61414460 + L1MA3 LINE L1 5441 6076 -229 1864 153 0 3 chr20 5253545 5253833 -61414172 + AluSx SINE Alu 1 287 -25 5884 104 73 64 chr20 5253833 5253889 -61414116 + L1MA3 LINE L1 6076 6130 -175 1453 124 200 0 chr20 5253889 5254139 -61413866 + AluSg SINE Alu 1 300 0 5884 104 73 64 chr20 5254139 5254292 -61413713 + L1MA3 LINE L1 6130 6305 0 1577 133 53 93 chr20 5254299 5254601 -61413404 + AluJb SINE Alu 1 290 -22 414 39 0 0 chr20 5254617 5254669 -61413336 + (CA)n Simple_repeat Simple_repeat 2 53 0 2314 99 0 10 chr20 5254937 5255249 -61412756 - AluSq SINE Alu -4 309 1 1967 149 0 7 chr20 5255261 5255550 -61412455 - AluJo SINE Alu -25 287 1 1846 137 4 0 chr20 5255576 5255846 -61412159 + AluJb SINE Alu 15 285 -27 1209 195 0 0 chr20 5256177 5256372 -61411633 + AluJb SINE Alu 104 298 -14 1948 137 3 7 chr20 5256372 5256678 -61411327 + AluSx SINE Alu 1 305 0 2336 103 3 0 chr20 5256680 5256990 -61411015 + AluSp SINE Alu 1 311 -2 187 303 30 40 chr20 5258312 5258411 -61409594 - MIR3 SINE MIR -105 103 6 1378 152 0 25 chr20 5258584 5258828 -61409177 - AluSg/x SINE Alu 0 312 75 1995 131 28 0 chr20 5258830 5259121 -61408884 - AluSx SINE Alu -13 299 1 2182 133 0 0 chr20 5259442 5259742 -61408263 + AluSx SINE Alu 1 300 -12 2330 113 0 0 chr20 5259871 5260181 -61407824 + AluSg SINE Alu 1 310 0 2268 97 3 6 chr20 5260380 5260691 -61407314 - AluSg SINE Alu 0 310 1 418 254 56 0 chr20 5262246 5262372 -61405633 - L1ME1 LINE L1 -52 6114 5982 532 157 12 0 chr20 5262548 5262631 -61405374 - HY4 scRNA scRNA -9 84 1 2099 111 21 17 chr20 5262636 5262924 -61405081 - AluSx SINE Alu -22 290 2 1269 195 99 64 chr20 5264211 5264698 -61403307 + L1MC5 LINE L1 6971 7474 -487 1060 166 11 6 chr20 5264731 5264906 -61403099 + FRAM SINE Alu 1 176 0 232 252 81 41 chr20 5265052 5265175 -61402830 - MIR SINE MIR -3 259 132 1403 143 0 0 chr20 5265202 5265405 -61402600 - AluSg/x SINE Alu -14 296 94 212 297 27 36 chr20 5265518 5265629 -61402376 + MIR SINE MIR 84 193 -69 1099 184 20 33 chr20 5266848 5267093 -61400912 + AluJo SINE Alu 55 296 -16 449 134 24 0 chr20 5267716 5267798 -61400207 + FLAM_A SINE Alu 44 127 -15 2160 84 0 53 chr20 5269347 5269670 -61398335 - AluSx SINE Alu 0 307 1 275 297 66 0 chr20 5269835 5269926 -61398079 - L1MEd LINE L1 -4895 1224 1128 207 100 0 0 chr20 5269926 5269956 -61398049 + (T)n Simple_repeat Simple_repeat 1 30 0 1270 162 160 46 chr20 5270107 5270172 -61397833 - HsTC2 DNA Tc2 -15 1883 1827 1586 187 17 7 chr20 5270172 5270472 -61397533 - AluJo SINE Alu -9 303 1 1270 162 160 46 chr20 5270472 5270517 -61397488 - HsTC2 DNA Tc2 -71 1827 1789 2407 110 0 0 chr20 5270517 5270827 -61397178 - AluSx SINE Alu 0 312 3 1270 162 160 46 chr20 5270827 5271109 -61396896 - HsTC2 DNA Tc2 -109 1789 1269 1194 234 45 6 chr20 5271106 5271418 -61396587 - HsTC2 DNA Tc2 -1385 513 190 * 330 273 186 51 chr20 5271543 5271777 -61396228 - L2 LINE L2 -255 3058 2793 2347 96 0 0 chr20 5271964 5272257 -61395748 + AluSx SINE Alu 5 297 -15 328 236 64 9 chr20 5272451 5272561 -61395444 - MLT1K LTR MaLR 0 588 473 724 296 58 10 chr20 5272585 5272876 -61395129 + L1ME LINE L1 5378 5682 -439 2211 96 30 3 chr20 5272901 5273204 -61394801 + AluSq SINE Alu 1 311 -2 1064 182 0 6 chr20 5273607 5273783 -61394222 + AluJo SINE Alu 4 178 -134 952 123 0 0 chr20 5273888 5274018 -61393987 + FLAM_C SINE Alu 2 131 -2 35 63 0 0 chr20 5274018 5274081 -61393924 + AT_rich Low_complexity Low_complexity 1 63 0 272 267 40 10 chr20 5274253 5274354 -61393651 + MIR SINE MIR 2 105 -157 1822 68 124 8 chr20 5274499 5274748 -61393257 + AluSg SINE Alu 1 278 -32 267 31 0 0 chr20 5274751 5274783 -61393222 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 241 277 0 48 chr20 5274835 5274918 -61393087 + MIR SINE MIR 176 254 -8 203 240 20 0 chr20 5275250 5275300 -61392705 + (CCCCG)n Simple_repeat Simple_repeat 4 54 0 27 29 0 0 chr20 5275520 5275554 -61392451 + GC_rich Low_complexity Low_complexity 1 34 0 357 287 74 8 chr20 5276646 5276768 -61391237 + Charlie8 DNA MER1_type 93 222 -2195 558 141 0 0 chr20 5277046 5277131 -61390874 + FLAM_A SINE Alu 1 85 -57 2197 107 0 26 chr20 5277822 5277991 -61390014 - AluSg SINE Alu -10 300 141 2144 121 7 0 chr20 5277991 5278288 -61389717 - AluSp SINE Alu -13 300 2 2197 107 0 26 chr20 5278288 5278426 -61389579 - AluSg SINE Alu -169 141 1 2284 91 0 7 chr20 5278504 5278822 -61389183 - AluSq SINE Alu 0 316 1 2266 75 3 36 chr20 5279042 5279349 -61388656 + AluSp SINE Alu 1 297 -16 2573 53 0 7 chr20 5279357 5279659 -61388346 + AluY SINE Alu 1 300 -11 387 319 65 23 chr20 5280236 5280452 -61387553 + MIR SINE MIR 11 235 -27 2171 129 0 0 chr20 5280650 5280945 -61387060 - AluSx SINE Alu -17 295 1 2079 71 27 37 chr20 5281438 5281734 -61386271 + AluY SINE Alu 1 293 -18 979 180 0 6 chr20 5281804 5281965 -61386040 - AluJo SINE Alu -17 295 136 223 333 0 0 chr20 5281973 5282051 -61385954 - MIR SINE MIR -64 144 67 2228 95 10 3 chr20 5282077 5282372 -61385633 - AluSp SINE Alu -16 297 1 2375 112 0 0 chr20 5283056 5283368 -61384637 - AluSq SINE Alu -1 312 1 22 0 0 0 chr20 5283631 5283653 -61384352 + AT_rich Low_complexity Low_complexity 1 22 0 636 130 104 9 chr20 5283659 5283774 -61384231 - AluJo SINE Alu -185 127 2 1914 169 32 9 chr20 5285333 5285676 -61382329 - L1PA15 LINE L1 -4 6161 5811 2217 112 3 0 chr20 5285796 5286090 -61381915 - AluSx SINE Alu -17 295 1 829 83 83 38 chr20 5286187 5286320 -61381685 + AluJo SINE Alu 112 250 -62 2384 86 3 0 chr20 5286343 5286644 -61381361 - AluY SINE Alu -9 302 1 848 153 15 0 chr20 5286666 5286797 -61381208 - FLAM_C SINE Alu 0 133 1 1254 135 13 26 chr20 5286797 5287015 -61380990 - L1 LINE L1 -1149 4997 4781 1966 136 0 0 chr20 5287036 5287309 -61380696 - AluSq SINE Alu -16 297 25 612 95 0 0 chr20 5287311 5287395 -61380610 + AluSg/x SINE Alu 176 259 -53 237 154 0 0 chr20 5287395 5287434 -61380571 + L1 LINE L1 4547 4585 -1561 1069 138 0 0 chr20 5287448 5287607 -61380398 + L1 LINE L1 4639 4797 -1349 1824 142 0 65 chr20 5287607 5287931 -61380074 + AluSx SINE Alu 1 303 -9 2673 150 20 16 chr20 5287931 5288347 -61379658 - L1 LINE L1 -1817 4329 3909 2215 103 0 10 chr20 5288347 5288649 -61379356 - AluSx SINE Alu -13 299 1 2673 150 20 16 chr20 5288649 5288720 -61379285 - L1 LINE L1 -2237 3909 3840 311 244 68 27 chr20 5288699 5288920 -61379085 - L1ME LINE L1 -295 5826 5555 * 260 213 33 0 chr20 5289080 5289141 -61378864 + MIR SINE MIR 114 176 -86 792 220 157 33 chr20 5289144 5289444 -61378561 + L1MC5 LINE L1 7044 7380 -581 2630 175 62 161 chr20 5289504 5290477 -61377528 + MER21A LTR ERV1 39 914 -17 604 162 8 43 chr20 5290588 5290705 -61377300 + FLAM_C SINE Alu 13 125 -18 2162 130 0 0 chr20 5290712 5291004 -61377001 + AluSx SINE Alu 1 292 -20 264 218 122 20 chr20 5291007 5291154 -61376851 + L1MC5 LINE L1 7520 7681 -280 1750 239 72 18 chr20 5291175 5291400 -61376605 + L1ME LINE L1 5103 5314 -856 1766 155 41 3 chr20 5291400 5291691 -61376314 - AluJo SINE Alu -10 302 1 1750 239 72 18 chr20 5291691 5292087 -61375918 + L1ME LINE L1 5314 5746 -424 530 87 0 0 chr20 5292085 5292154 -61375851 - L1M3 LINE L1 -463 5720 5652 * 415 129 0 0 chr20 5292165 5292235 -61375770 - Alu SINE Alu -1 311 242 787 56 25 168 chr20 5292235 5292300 -61375705 - L1M3 LINE L1 -469 5714 5684 2081 149 0 0 chr20 5292300 5292608 -61375397 - AluSx SINE Alu 0 312 5 787 56 25 168 chr20 5292608 5292703 -61375302 - L1M3 LINE L1 -499 5684 5577 323 130 234 13 chr20 5292715 5292792 -61375213 + Charlie1 DNA MER1_type 2620 2713 -48 269 189 38 0 chr20 5292891 5292944 -61375061 - MER94 DNA DNA -79 55 1 1886 181 3 0 chr20 5294362 5294666 -61373339 - AluJb SINE Alu -3 309 5 1784 244 98 7 chr20 5295292 5295739 -61372266 - MLT1J LTR MaLR -18 493 6 692 177 46 0 chr20 5296120 5296250 -61371755 - FLAM_C SINE Alu -6 137 2 556 191 157 0 chr20 5296275 5296390 -61371615 - FLAM_A SINE Alu 0 133 1 588 119 0 40 chr20 5296490 5296591 -61371414 - AluSg/x SINE Alu 0 312 216 205 219 109 47 chr20 5296766 5296830 -61371175 - MIR SINE MIR -99 109 42 782 112 0 40 chr20 5297542 5297667 -61370338 - AluJb SINE Alu -1 311 192 236 299 89 0 chr20 5297756 5297913 -61370092 - L1ME LINE L1 -671 5450 5280 887 143 0 0 chr20 5298123 5298249 -61369756 - FLAM_C SINE Alu -7 126 1 2078 113 7 0 chr20 5298260 5298562 -61369443 - AluSq SINE Alu -9 304 1 266 204 57 23 chr20 5298562 5298650 -61369355 - L1 LINE L1 -1102 5044 4954 204 286 32 16 chr20 5298898 5298961 -61369044 - MIR3 SINE MIR -142 66 3 751 189 8 0 chr20 5300030 5300157 -61367848 + FLAM_A SINE Alu 4 131 -2 734 172 8 0 chr20 5300162 5300284 -61367721 - FLAM_C SINE Alu -19 124 2 2334 96 3 0 chr20 5300299 5300611 -61367394 - AluSp SINE Alu 0 313 1 186 71 0 0 chr20 5300628 5300656 -61367349 + (A)n Simple_repeat Simple_repeat 1 28 0 2123 99 0 3 chr20 5301007 5301290 -61366715 + AluSx SINE Alu 1 282 -30 412 261 43 43 chr20 5301641 5301802 -61366203 + MER112 DNA MER1_type 17 177 -83 583 245 109 11 chr20 5301809 5301993 -61366012 - L1ME3A LINE L1 -6 6164 5963 392 191 95 0 chr20 5302000 5302084 -61365921 + MER112 DNA MER1_type 161 252 -8 207 295 66 0 chr20 5302123 5302184 -61365821 - MIR SINE MIR -67 141 77 371 229 194 14 chr20 5302952 5303096 -61364909 - L2 LINE L2 -36 3277 3108 207 0 0 0 chr20 5303187 5303210 -61364795 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1787 159 0 0 chr20 5303212 5303495 -61364510 - AluJb SINE Alu -29 283 1 756 178 59 87 chr20 5304099 5304352 -61363653 - MLT1D LTR MaLR -256 249 4 190 341 71 29 chr20 5304575 5304745 -61363260 - L2 LINE L2 -578 2736 2560 845 289 135 27 chr20 5305153 5305554 -61362451 - MLT1K LTR MaLR -19 569 126 1979 193 23 3 chr20 5306059 5306412 -61361593 - MLT1A1 LTR MaLR 0 365 6 1131 70 41 35 chr20 5306531 5306703 -61361302 - MER30 DNA MER1_type -57 173 1 2010 122 0 22 chr20 5306712 5307023 -61360982 - AluSq SINE Alu -9 304 1 1259 63 11 37 chr20 5307717 5307906 -61360099 - L1PA3 LINE L1 0 6155 5972 953 143 35 64 chr20 5309030 5309079 -61358926 - MER3 DNA MER1_type 0 209 160 4349 126 22 27 chr20 5309079 5309820 -61358185 - L1MB3 LINE L1 -1 6182 5446 953 143 35 64 chr20 5309820 5309973 -61358032 - MER3 DNA MER1_type -49 160 13 209 217 0 22 chr20 5310444 5310490 -61357515 - L3 LINE CR1 -568 1009 965 233 286 16 0 chr20 5310550 5310613 -61357392 - MLT1K LTR MaLR -345 243 180 1504 281 59 23 chr20 5310700 5310729 -61357276 - L2 LINE L2 -823 2491 2465 1370 146 35 9 chr20 5310729 5310955 -61357050 + MER46A DNA MER2_type 3 234 -2 1504 281 59 23 chr20 5310955 5311497 -61356508 - L2 LINE L2 -849 2465 1899 661 184 0 0 chr20 5311610 5311719 -61356286 + FLAM_C SINE Alu 2 110 -33 400 166 23 168 chr20 5311719 5311803 -61356202 - L1MC5 LINE L1 -825 6983 7010 2162 102 3 0 chr20 5311803 5312108 -61355897 - AluSp SINE Alu -7 306 1 400 166 23 168 chr20 5312108 5312233 -61355772 - L1MC5 LINE L1 -797 7011 6870 2099 124 3 0 chr20 5312327 5312633 -61355372 - AluSx SINE Alu -1 311 5 236 233 139 0 chr20 5313984 5314070 -61353935 - L2 LINE L2 -35 3237 3140 841 208 0 0 chr20 5314091 5314250 -61353755 - AluJb SINE Alu -7 305 147 1157 329 172 18 chr20 5314400 5315608 -61352397 - L2 LINE L2 -357 2957 1564 207 100 0 0 chr20 5316081 5316111 -61351894 + (TA)n Simple_repeat Simple_repeat 2 31 0 2239 108 0 9 chr20 5316680 5316995 -61351010 + AluSx SINE Alu 1 312 0 277 176 206 0 chr20 5318033 5318101 -61349904 - L2 LINE L2 -2 3270 3189 1734 37 0 0 chr20 5319322 5319538 -61348467 + L1P LINE L1 3202 3417 -2729 224 311 90 57 chr20 5320299 5320421 -61347584 - MIR SINE MIR -116 146 21 241 262 55 67 chr20 5320924 5321088 -61346917 + L1M LINE L1 5259 5420 -744 569 204 309 0 chr20 5322834 5322996 -61345009 + MIR SINE MIR 13 224 -38 2079 67 57 3 chr20 5323002 5323284 -61344721 + AluY SINE Alu 1 297 -14 2076 77 0 0 chr20 5324073 5324357 -61343648 + AluSg SINE Alu 21 304 0 1355 139 132 26 chr20 5324684 5324950 -61343055 + AluJb SINE Alu 1 294 -18 1904 137 3 3 chr20 5327669 5327969 -61340036 - AluSx SINE Alu -12 300 1 246 221 177 44 chr20 5328222 5328335 -61339670 + MIR SINE MIR 81 208 -54 336 209 136 27 chr20 5328506 5328616 -61339389 + MARNA DNA Mariner 296 417 -169 3262 94 24 2 chr20 5328864 5329320 -61338685 - MER41A LTR ERV1 -88 466 1 3720 91 55 2 chr20 5329320 5329860 -61338145 - MER41A-int LTR ERV1 -2 6093 5394 669 81 23 0 chr20 5329842 5329928 -61338077 - MER41B-int LTR ERV1 -5858 88 1 * 952 150 0 0 chr20 5329928 5330081 -61337924 - MER41B LTR ERV1 0 635 483 1013 161 16 27 chr20 5330082 5330155 -61337850 - MER58A DNA MER1_type -2203 217 145 1621 152 35 90 chr20 5330155 5330523 -61337482 - MER7A DNA MER2_type 0 346 1 1013 161 16 27 chr20 5330523 5330635 -61337370 - MER58A DNA MER1_type -2275 145 34 827 217 33 5 chr20 5331763 5331947 -61336058 - MER5A DNA MER1_type 0 189 1 326 265 74 48 chr20 5331953 5332380 -61335625 + L1M4 LINE L1 3313 3846 -2300 1823 107 26 23 chr20 5332424 5332732 -61335273 + AluSg SINE Alu 1 309 -1 250 297 0 31 chr20 5332959 5333087 -61334918 + HAL1 LINE L1 2301 2424 -83 196 313 78 16 chr20 5333181 5333245 -61334760 - L2 LINE L2 -1 3271 3204 1517 195 0 13 chr20 5333686 5333989 -61334016 + AluJo SINE Alu 1 299 -13 5044 170 81 53 chr20 5335583 5336146 -61331859 + Charlie1a DNA MER1_type 1 547 -2214 1912 107 36 32 chr20 5336146 5336455 -61331550 + AluSx SINE Alu 1 310 -2 5044 170 81 53 chr20 5336455 5336603 -61331402 + Charlie1a DNA MER1_type 547 689 -2072 234 0 0 0 chr20 5336603 5336629 -61331376 + (TG)n Simple_repeat Simple_repeat 2 27 0 5044 170 81 53 chr20 5336629 5337101 -61330904 + Charlie1a DNA MER1_type 689 1218 -237 2087 144 101 36 chr20 5337149 5337565 -61330440 - MSTB2 LTR MaLR 0 457 15 716 162 17 8 chr20 5337966 5338083 -61329922 + FLAM_C SINE Alu 1 118 -15 565 183 50 0 chr20 5343417 5343537 -61324468 - MIR SINE MIR -21 241 116 637 190 8 0 chr20 5343642 5343763 -61324242 + MIR SINE MIR 141 262 0 22 0 0 0 chr20 5345679 5345701 -61322304 + AT_rich Low_complexity Low_complexity 1 22 0 204 67 0 0 chr20 5345781 5345811 -61322194 + (T)n Simple_repeat Simple_repeat 1 30 0 204 348 140 6 chr20 5346931 5347109 -61320896 + L2 LINE L2 2493 2694 -620 7688 19 0 0 chr20 5347960 5349058 -61318947 - L1PA4 LINE L1 0 6155 5047 11876 27 4 0 chr20 5349058 5350439 -61317566 + L1PA4 LINE L1 3675 5060 -1086 2272 95 0 7 chr20 5350441 5350735 -61317270 - AluSx SINE Alu -12 300 9 1106 252 151 44 chr20 5350745 5351309 -61316696 - L2 LINE L2 -9 3304 2802 477 47 0 0 chr20 5351309 5351373 -61316632 + (CA)n Simple_repeat Simple_repeat 2 65 0 1106 252 151 44 chr20 5351373 5351760 -61316245 - L2 LINE L2 -511 2802 2174 758 209 22 44 chr20 5352507 5352689 -61315316 + MER5B DNA MER1_type 1 178 0 2341 94 0 3 chr20 5352915 5353214 -61314791 - AluSx SINE Alu -14 298 1 192 309 43 52 chr20 5353217 5353427 -61314578 - L3 LINE CR1 -257 1320 1113 907 162 81 0 chr20 5353710 5353950 -61314055 - L1MC4 LINE L1 0 8042 7683 236 302 105 0 chr20 5354186 5354272 -61313733 + MIR SINE MIR 56 150 -112 816 203 4 84 chr20 5354694 5354931 -61313074 + MIR SINE MIR 45 262 0 1906 160 24 0 chr20 5354991 5355284 -61312721 - AluSx SINE Alu -12 300 1 809 192 28 84 chr20 5355483 5355769 -61312236 + L1MC5 LINE L1 6810 7079 -882 747 181 0 0 chr20 5355812 5355928 -61312077 - FLAM_C SINE Alu -23 120 5 826 165 86 58 chr20 5355932 5356175 -61311830 + L1M4 LINE L1 4897 5146 -1000 282 363 25 0 chr20 5356894 5357051 -61310954 - MIR SINE MIR -11 251 91 3195 224 16 0 chr20 5357505 5358216 -61309789 + L1 LINE L1 3899 4620 -1526 1032 160 0 17 chr20 5358229 5358404 -61309601 - FRAM SINE Alu -7 169 1 2457 185 25 53 chr20 5358406 5358773 -61309232 + L1 LINE L1 4607 4983 -1163 2048 145 0 3 chr20 5358773 5359070 -61308935 - AluSx SINE Alu -16 296 1 2457 185 25 53 chr20 5359070 5359244 -61308761 + L1 LINE L1 4983 5134 -1012 2346 110 0 0 chr20 5359244 5359552 -61308453 + AluSx SINE Alu 1 308 -4 2457 185 25 53 chr20 5359552 5359577 -61308428 + L1 LINE L1 5134 5158 -988 418 282 18 0 chr20 5359607 5359717 -61308288 - LTR16C LTR ERVL -235 256 145 942 151 33 160 chr20 5359806 5360082 -61307923 + MER33 DNA MER1_type 1 215 -2370 1572 171 13 49 chr20 5360082 5360386 -61307619 - AluJb SINE Alu -19 293 1 942 151 33 160 chr20 5360386 5360476 -61307529 + MER33 DNA MER1_type 215 315 -9 1162 271 73 40 chr20 5361200 5361624 -61306381 - MLT1J LTR MaLR -73 438 1 1800 92 24 4 chr20 5361815 5362066 -61305939 + L1PA10 LINE L1 5908 6163 -5 402 21 0 0 chr20 5362085 5362132 -61305873 + (TG)n Simple_repeat Simple_repeat 1 47 0 419 265 84 63 chr20 5363790 5363992 -61304013 - L2 LINE L2 -648 2666 2457 2124 131 0 16 chr20 5363992 5364297 -61303708 + AluSx SINE Alu 1 300 -12 419 265 84 63 chr20 5364297 5364332 -61303673 - L2 LINE L2 -857 2457 2424 474 276 70 37 chr20 5364807 5364920 -61303085 - LTR16C LTR ERVL -26 465 357 1753 146 41 0 chr20 5364920 5365188 -61302817 + AluJo SINE Alu 1 279 -33 474 276 70 37 chr20 5365188 5365470 -61302535 - LTR16C LTR ERVL -134 357 1 2044 128 0 50 chr20 5365591 5365910 -61302095 - AluSx SINE Alu -9 303 1 456 62 0 0 chr20 5365926 5365990 -61302015 + (TA)n Simple_repeat Simple_repeat 2 65 0 2541 128 32 5 chr20 5366779 5367179 -61300826 - MSTB LTR MaLR -15 411 1 785 299 126 24 chr20 5367440 5368126 -61299879 + L2 LINE L2 2555 3308 -5 210 280 84 56 chr20 5368224 5368367 -61299638 + MIR3 SINE MIR 48 194 -14 1106 249 127 28 chr20 5368505 5368938 -61299067 + LTR16C LTR ERVL 1 476 -15 2997 107 9 12 chr20 5370117 5370546 -61297459 + MSTC LTR MaLR 1 428 0 2624 65 0 0 chr20 5370901 5371211 -61296794 - AluY SINE Alu -1 310 1 1386 229 91 21 chr20 5372308 5372728 -61295277 + LTR16A1 LTR ERVL 8 456 -1 2222 125 0 10 chr20 5372882 5373186 -61294819 - AluSx SINE Alu -10 302 2 2276 170 62 5 chr20 5373505 5373940 -61294065 + MLT1C LTR MaLR 6 465 -2 320 64 21 0 chr20 5374192 5374239 -61293766 + (TTTC)n Simple_repeat Simple_repeat 3 50 0 4073 42 16 8 chr20 5374265 5374766 -61293239 - L1PA6 LINE L1 -11 6143 5639 400 278 26 0 chr20 5375274 5375389 -61292616 - Charlie7 DNA MER1_type -1922 690 573 2437 78 0 0 chr20 5375618 5375914 -61292091 + AluY SINE Alu 1 296 -15 2112 128 0 0 chr20 5376502 5376799 -61291206 - AluJb SINE Alu -15 297 1 1935 243 96 98 chr20 5376885 5377516 -61290489 + Charlie7 DNA MER1_type 125 753 -1859 2216 140 0 0 chr20 5377516 5377824 -61290181 + AluSx SINE Alu 1 308 -4 1935 243 96 98 chr20 5377824 5378331 -61289674 + Charlie7 DNA MER1_type 753 1260 -1352 226 222 0 0 chr20 5378552 5378597 -61289408 + Charlie7 DNA MER1_type 1377 1421 -1191 587 106 24 0 chr20 5378598 5378683 -61289322 + MER21B LTR ERV1 329 415 -448 210 71 0 0 chr20 5378723 5378751 -61289254 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 569 212 152 24 chr20 5378789 5378954 -61289051 + Charlie7 DNA MER1_type 1503 1688 -924 321 238 42 49 chr20 5379411 5379554 -61288451 + L1MC5 LINE L1 7540 7681 -280 1189 182 153 10 chr20 5379560 5379845 -61288160 + MLT1A1 LTR MaLR 1 333 -32 791 195 7 7 chr20 5379845 5379999 -61288006 - FRAM SINE Alu -22 154 1 247 294 28 51 chr20 5380039 5380294 -61287711 + L1MC4 LINE L1 7794 8042 0 379 250 153 20 chr20 5380315 5380511 -61287494 + Charlie7 DNA MER1_type 1713 1934 -678 3537 197 43 7 chr20 5380512 5381329 -61286676 + L1MB2 LINE L1 4342 5187 -959 1210 196 141 4 chr20 5381332 5381587 -61286418 + AluJo SINE Alu 2 291 -11 369 185 80 8 chr20 5381590 5381701 -61286304 + Alu SINE Alu 234 297 -5 5030 145 32 23 chr20 5381711 5382319 -61285686 + L1MB2 LINE L1 5166 5791 -380 184 57 29 29 chr20 5382319 5382354 -61285651 + (TA)n Simple_repeat Simple_repeat 1 35 0 5030 145 32 23 chr20 5382354 5382738 -61285267 + L1MB2 LINE L1 5791 6170 -1 884 224 114 59 chr20 5382752 5383260 -61284745 + Charlie7 DNA MER1_type 1927 2462 -150 207 0 0 0 chr20 5383429 5383452 -61284553 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 1120 176 35 0 chr20 5383526 5383725 -61284280 + MER3 DNA MER1_type 2 207 -2 588 40 0 0 chr20 5384246 5384321 -61283684 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 32612 110 12 52 chr20 5384321 5390718 -61277287 - L1PA7 LINE L1 -12 6142 12 1701 95 32 4 chr20 5390960 5391212 -61276793 + L1MA2 LINE L1 6006 6264 -40 3784 66 10 0 chr20 5391212 5391693 -61276312 + L1PA6 LINE L1 5663 6153 -1 331 167 0 0 chr20 5392326 5392386 -61275619 + L1MA3 LINE L1 6246 6305 0 601 269 8 61 chr20 5393136 5393400 -61274605 + L1M4 LINE L1 4442 4691 -1455 243 276 0 0 chr20 5393460 5393518 -61274487 - L2 LINE L2 0 3313 3256 1097 155 5 15 chr20 5393563 5393763 -61274242 - L1PB2 LINE L1 -3 6864 6667 14944 162 24 10 chr20 5394023 5399641 -61268364 - L1PB2 LINE L1 -175 6692 998 360 111 0 0 chr20 5399641 5399695 -61268310 + (T)n Simple_repeat Simple_repeat 1 54 0 3530 222 21 12 chr20 5399724 5400588 -61267417 - L1M4c LINE L1 -3263 4302 3328 1931 149 3 34 chr20 5400588 5400910 -61267095 - AluSx SINE Alu 0 312 1 3530 222 21 12 chr20 5400910 5401337 -61266668 - L1M4c LINE L1 -4237 3328 2906 1509 195 22 11 chr20 5401337 5401614 -61266391 - AluJo SINE Alu -2 310 31 605 350 5 9 chr20 5401614 5401828 -61266177 - L1M4c LINE L1 -5742 1744 1532 * 963 186 9 27 chr20 5401816 5402036 -61265969 - L1 LINE L1 -2567 3579 3364 * 2545 160 44 48 chr20 5402034 5402559 -61265446 + L1MA9 LINE L1 5768 6290 -22 180 0 0 0 chr20 5402567 5402587 -61265418 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 6691 185 58 51 chr20 5402589 5403340 -61264665 + L1MD1 LINE L1 14 758 -5782 2017 123 0 27 chr20 5403340 5403640 -61264365 + AluSx SINE Alu 1 292 -20 6691 185 58 51 chr20 5403640 5404972 -61263033 + L1MD1 LINE L1 758 2453 -4087 3372 241 43 18 chr20 5404967 5405059 -61262946 + L1MD1 LINE L1 4158 4246 -2294 * 737 238 0 0 chr20 5405059 5405185 -61262820 + FLAM_A SINE Alu 1 126 -7 3372 241 43 18 chr20 5405185 5406041 -61261964 + L1MD1 LINE L1 4246 5130 -1410 1798 166 31 17 chr20 5406043 5406392 -61261613 - MLT1A1 LTR MaLR 0 365 12 2262 197 44 49 chr20 5406404 5407488 -61260517 + L1MD1 LINE L1 5129 6214 -422 5405 66 19 9 chr20 5407494 5408177 -61259828 + L1PA10 LINE L1 5479 6168 0 2491 151 44 2 chr20 5408177 5408586 -61259419 + L1MD1 LINE L1 6208 6636 0 2061 109 3 3 chr20 5408594 5408908 -61259097 + AluSx SINE Alu 1 314 0 2123 102 0 23 chr20 5409001 5409304 -61258701 - AluSc SINE Alu -12 297 2 451 270 65 99 chr20 5409466 5410183 -61257822 + L1MC4a LINE L1 5255 5931 -231 3144 133 44 11 chr20 5411000 5411542 -61256463 + L1MC1 LINE L1 5383 5942 -391 1073 210 58 0 chr20 5411540 5411764 -61256241 - L1ME LINE L1 -540 5624 5388 * 565 189 217 0 chr20 5412291 5412434 -61255571 - MER5A DNA MER1_type -7 182 9 2486 129 65 8 chr20 5412615 5413017 -61254988 - MSTB1 LTR MaLR 0 432 8 318 231 17 0 chr20 5413143 5413234 -61254771 + L1ME LINE L1 5750 5817 -304 1227 259 171 23 chr20 5413815 5414243 -61253762 + LTR16C LTR ERVL 1 491 0 917 240 132 12 chr20 5414542 5414830 -61253175 - HAL1 LINE L1 -2114 393 58 2080 144 0 3 chr20 5414830 5415129 -61252876 + AluSx SINE Alu 1 298 -14 917 240 132 12 chr20 5415129 5415173 -61252832 - HAL1 LINE L1 -2449 58 21 502 265 27 27 chr20 5415276 5415423 -61252582 - MER5A DNA MER1_type -3 186 40 464 354 91 30 chr20 5415538 5415900 -61252105 - L3 LINE CR1 -174 1403 1020 1837 163 35 0 chr20 5417288 5417577 -61250428 - AluJo SINE Alu -13 299 1 231 36 0 0 chr20 5418098 5418126 -61249879 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 1490 111 0 5 chr20 5418387 5418594 -61249411 - AluY SINE Alu -105 206 1 188 283 120 22 chr20 5418801 5418893 -61249112 + MIR SINE MIR 30 130 -78 342 0 0 0 chr20 5419011 5419049 -61248956 + (TC)n Simple_repeat Simple_repeat 2 39 0 2059 83 4 0 chr20 5419718 5419997 -61248008 + AluSp SINE Alu 32 311 0 1477 212 33 44 chr20 5420086 5420449 -61247556 - MLT1A1 LTR MaLR -6 359 1 614 211 68 84 chr20 5420678 5420915 -61247090 + LTR16A1 LTR ERVL 205 437 -20 1486 225 15 0 chr20 5421226 5421550 -61246455 - L1MA9 LINE L1 -34 6278 5950 693 204 0 0 chr20 5421560 5421692 -61246313 + MIR SINE MIR 59 190 -72 506 261 86 39 chr20 5422623 5423064 -61244941 + LTR33 LTR ERVL 14 521 0 207 0 0 0 chr20 5424130 5424153 -61243852 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 419 288 0 14 chr20 5424258 5424397 -61243608 - L1M4 LINE L1 -1300 4846 4710 343 333 63 8 chr20 5424442 5424694 -61243311 - L1M4 LINE L1 -1819 4327 4062 8493 31 0 1 chr20 5424738 5426463 -61241542 - L1PA3 LINE L1 0 6155 4431 10768 26 0 0 chr20 5426463 5427733 -61240272 + L1P LINE L1 2693 3962 -2184 274 155 0 28 chr20 5428018 5428089 -61239916 + CT-rich Low_complexity Low_complexity 1 69 0 3524 195 19 2 chr20 5428803 5429438 -61238567 + MER82 DNA MER2_type 1 646 -7 948 106 8 0 chr20 5430531 5430663 -61237342 - MLT1D LTR MaLR 0 505 373 15922 195 30 14 chr20 5430670 5434477 -61233528 + L1PB1 LINE L1 6 4134 -2733 2071 95 0 0 chr20 5434477 5434750 -61233255 + AluY SINE Alu 39 311 0 15922 195 30 14 chr20 5434750 5437525 -61230480 + L1PB1 LINE L1 4134 6863 -4 530 211 261 0 chr20 5437587 5437729 -61230276 - MLT1D LTR MaLR -118 387 209 189 0 0 0 chr20 5437755 5437776 -61230229 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 733 214 0 0 chr20 5437782 5437899 -61230106 - FLAM_C SINE Alu -25 118 2 1133 174 18 28 chr20 5437918 5438136 -61229869 - MLT1D LTR MaLR -289 216 1 1894 141 28 0 chr20 5438427 5438710 -61229295 + AluJb SINE Alu 14 304 -8 1978 141 8 57 chr20 5438711 5439079 -61228926 + L1MA8 LINE L1 5942 6291 0 198 289 14 41 chr20 5439483 5439632 -61228373 - L3 LINE CR1 -885 692 473 23 0 0 0 chr20 5440807 5440830 -61227175 + AT_rich Low_complexity Low_complexity 1 23 0 32 57 0 0 chr20 5441700 5441753 -61226252 + AT_rich Low_complexity Low_complexity 1 53 0 458 255 145 30 chr20 5443574 5443774 -61224231 - MIR SINE MIR -3 259 37 1522 194 45 17 chr20 5444681 5444969 -61223036 - AluJo SINE Alu -12 300 5 2205 123 0 0 chr20 5445453 5445746 -61222259 + AluSx SINE Alu 1 293 -19 1069 147 57 6 chr20 5445874 5446263 -61221742 + LTR64 LTR ERVK 1 552 -6 180 398 48 0 chr20 5446792 5446875 -61221130 + MIR SINE MIR 58 144 -118 426 85 0 0 chr20 5446925 5446984 -61221021 + (TG)n Simple_repeat Simple_repeat 1 59 0 27 29 0 0 chr20 5447995 5448029 -61219976 + AT_rich Low_complexity Low_complexity 1 34 0 1998 139 10 7 chr20 5448170 5448471 -61219534 - AluSx SINE Alu -10 302 1 228 167 0 21 chr20 5448554 5448602 -61219403 + (CAAA)n Simple_repeat Simple_repeat 1 47 0 190 222 37 136 chr20 5449124 5449205 -61218800 - MIR SINE MIR -81 181 109 194 0 39 0 chr20 5449752 5449778 -61218227 + (TTG)n Simple_repeat Simple_repeat 2 28 0 2090 128 7 0 chr20 5449780 5450078 -61217927 - AluSx SINE Alu -12 300 1 446 315 78 30 chr20 5451465 5451697 -61216308 + MIR SINE MIR 20 262 0 250 98 0 24 chr20 5452390 5452431 -61215574 + MER9 LTR ERVK 1 40 -471 21743 59 5 3 chr20 5452431 5455073 -61212932 + HERVK9 LTR ERVK 138 2786 -3130 1933 48 0 0 chr20 5455073 5455304 -61212701 + HERVK9 LTR ERVK 3711 3941 -1975 * 7987 94 2 3 chr20 5455303 5456357 -61211648 + HERVK9 LTR ERVK 4582 5634 -282 2269 94 44 13 chr20 5456382 5456727 -61211278 + HERVK9 LTR ERVK 4936 5916 0 3715 77 8 49 chr20 5456727 5457260 -61210745 + MER9 LTR ERVK 1 511 0 1949 187 49 55 chr20 5457755 5458263 -61209742 - MLT1D LTR MaLR 0 505 1 322 242 50 115 chr20 5458484 5458666 -61209339 + MIR3 SINE MIR 18 187 -21 315 242 24 23 chr20 5459207 5459383 -61208622 + LTR16C LTR ERVL 240 490 -1 3653 65 0 0 chr20 5460099 5460543 -61207462 + MLT2A1 LTR ERVL 1 444 0 359 289 25 8 chr20 5460544 5460665 -61207340 - MER5A DNA MER1_type -7 182 60 2396 81 0 0 chr20 5460667 5460952 -61207053 - AluSq SINE Alu -26 287 3 1524 97 8 24 chr20 5461464 5461712 -61206293 + L1MA5 LINE L1 6055 6298 -2 592 217 67 27 chr20 5461907 5462094 -61205911 + L1ME3 LINE L1 5883 6074 -88 238 299 0 0 chr20 5463629 5463696 -61204309 + L2 LINE L2 3245 3311 -2 300 258 0 62 chr20 5466051 5466148 -61201857 - Charlie8 DNA MER1_type -2212 205 115 183 220 40 0 chr20 5466247 5466297 -61201708 + MIR3 SINE MIR 150 201 -7 727 278 122 16 chr20 5466833 5467203 -61200802 - LTR16C LTR ERVL 0 491 83 204 40 0 0 chr20 5468149 5468174 -61199831 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 901 193 0 0 chr20 5468174 5468324 -61199681 - FRAM SINE Alu -16 150 1 1347 190 6 100 chr20 5468341 5468672 -61199333 - AluJb SINE Alu -2 300 1 472 289 0 72 chr20 5468790 5468846 -61199159 + L1ME LINE L1 5548 5606 -515 1763 175 10 7 chr20 5468846 5469138 -61198867 + AluJo SINE Alu 1 293 -19 472 289 0 72 chr20 5469138 5469289 -61198716 + L1ME LINE L1 5606 5740 -381 2490 70 3 6 chr20 5470045 5470357 -61197648 - AluY SINE Alu 0 311 1 319 203 16 0 chr20 5470821 5470885 -61197120 - LTR16C LTR ERVL 0 491 427 353 222 20 10 chr20 5470923 5471022 -61196983 - MLT1H LTR MaLR -419 130 31 297 265 10 20 chr20 5471105 5471207 -61196798 + LTR67 LTR ERVL 457 557 0 270 206 165 52 chr20 5471211 5471308 -61196697 - MIR SINE MIR -147 115 8 2689 122 34 5 chr20 5472647 5473065 -61194940 - L1PA15 LINE L1 -5 6160 5731 198 0 0 0 chr20 5473315 5473337 -61194668 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 2494 36 0 0 chr20 5473337 5473616 -61194389 - AluY SINE Alu -32 279 1 388 0 0 0 chr20 5473997 5474044 -61193961 + L1PA3 LINE L1 6106 6152 -3 318 285 176 6 chr20 5475178 5475343 -61192662 - MER91A DNA MER1_type -2 194 2 801 212 0 18 chr20 5477462 5477632 -61190373 - MER5B DNA MER1_type -3 175 9 2151 118 20 3 chr20 5477716 5478021 -61189984 - AluSx SINE Alu -2 310 1 5469 150 10 18 chr20 5478174 5479102 -61188903 - MER49 LTR ERV1 0 923 4 2742 203 59 89 chr20 5479106 5479950 -61188055 - MER49-int LTR ERV1 -1 6757 5939 471 98 113 217 chr20 5479952 5480025 -61187980 - MER49-int LTR ERV1 -1367 4964 4885 1891 152 49 21 chr20 5480025 5480353 -61187652 - MER1B DNA MER1_type 0 337 1 471 98 113 217 chr20 5480353 5480410 -61187595 - MER49-int LTR ERV1 -1446 4885 4860 816 154 0 0 chr20 5480410 5480533 -61187472 - FLAM_C SINE Alu -9 124 2 471 98 113 217 chr20 5480533 5480604 -61187401 - MER49-int LTR ERV1 -1471 4860 4783 497 161 7 72 chr20 5480752 5480956 -61187049 - MER49-int LTR ERV1 -4167 3953 3786 573 189 56 39 chr20 5481117 5481355 -61186650 - LTR49-int LTR ERV1 -1865 4733 3913 918 174 7 7 chr20 5481360 5481515 -61186490 + FRAM SINE Alu 4 158 -18 3011 144 29 8 chr20 5481552 5482183 -61185822 - Ricksha DNA DNA -1368 1878 1201 1263 135 333 7 chr20 5482181 5482463 -61185542 - Ricksha DNA DNA -2870 376 3 * 347 268 95 60 chr20 5482472 5482640 -61185365 - MLT1H LTR MaLR -252 297 124 365 0 22 0 chr20 5482870 5482915 -61185090 + (TG)n Simple_repeat Simple_repeat 2 47 0 6864 68 13 13 chr20 5482952 5483944 -61184061 - L1PA10 LINE L1 -3 6165 5171 1432 279 109 33 chr20 5484059 5484777 -61183228 + L1MC4 LINE L1 7270 8041 -1 188 33 0 33 chr20 5484872 5484902 -61183103 + (CAA)n Simple_repeat Simple_repeat 2 30 0 12030 181 37 15 chr20 5485427 5487271 -61180734 + L1MB3 LINE L1 25 1825 -4594 2090 153 3 0 chr20 5487271 5487578 -61180427 - AluJb SINE Alu -4 308 1 12030 181 37 15 chr20 5487578 5490825 -61177180 + L1MB3 LINE L1 1825 5188 -1231 1870 157 16 16 chr20 5490825 5491137 -61176868 - AluJb SINE Alu 0 312 1 12030 181 37 15 chr20 5491137 5492397 -61175608 + L1MB3 LINE L1 5188 6418 -1 28 0 0 0 chr20 5493952 5493980 -61174025 + AT_rich Low_complexity Low_complexity 1 28 0 242 307 79 0 chr20 5494955 5495056 -61172949 + L2 LINE L2 2928 3036 -236 1740 166 5 93 chr20 5495413 5495810 -61172195 - MLT1A1 LTR MaLR 0 365 4 488 294 77 21 chr20 5495818 5496053 -61171952 - MIR SINE MIR -10 252 5 1956 185 75 23 chr20 5496975 5497413 -61170592 + MLT1C LTR MaLR 6 466 -1 491 270 18 25 chr20 5497425 5497588 -61170417 + MER5B DNA MER1_type 17 178 0 415 250 0 0 chr20 5498051 5498139 -61169866 + MER5A DNA MER1_type 15 102 -87 838 234 27 0 chr20 5498499 5498683 -61169322 + MER5A DNA MER1_type 1 189 0 1109 191 132 0 chr20 5498789 5499024 -61168981 + L1ME3A LINE L1 5707 5972 -198 2030 123 19 32 chr20 5499136 5499445 -61168560 - AluSx SINE Alu -7 305 1 555 261 6 22 chr20 5499498 5499678 -61168327 + L1ME3A LINE L1 5989 6165 -5 315 367 14 14 chr20 5500496 5500643 -61167362 - MIR3 SINE MIR -24 184 38 2637 102 8 8 chr20 5500835 5501189 -61166816 - THE1A LTR MaLR 0 355 2 2372 42 0 17 chr20 5501208 5501528 -61166477 - AluY SINE Alu 0 315 1 26 30 0 0 chr20 5501528 5501561 -61166444 + AT_rich Low_complexity Low_complexity 1 33 0 259 295 77 0 chr20 5501660 5501738 -61166267 - L2 LINE L2 -25 3247 3164 21 57 0 0 chr20 5502220 5502255 -61165750 + AT_rich Low_complexity Low_complexity 1 35 0 204 319 76 17 chr20 5502293 5502412 -61165593 - L3 LINE CR1 -315 1262 1137 28 48 0 0 chr20 5502500 5502542 -61165463 + AT_rich Low_complexity Low_complexity 1 42 0 191 39 39 59 chr20 5502612 5502663 -61165342 + (TTAAA)n Simple_repeat Simple_repeat 1 50 0 22 0 0 0 chr20 5502663 5502685 -61165320 + AT_rich Low_complexity Low_complexity 1 22 0 184 359 39 0 chr20 5502769 5502872 -61165133 + L3 LINE CR1 1137 1243 -334 252 265 31 20 chr20 5502877 5502975 -61165030 - LTR67 LTR ERVL 0 557 459 243 302 147 9 chr20 5503308 5503424 -61164581 + L2 LINE L2 3137 3268 -4 226 339 52 9 chr20 5503442 5503557 -61164448 + L3 LINE CR1 1283 1402 -175 357 305 116 12 chr20 5503631 5503795 -61164210 + MLT1K LTR MaLR 31 211 -377 431 303 49 6 chr20 5504127 5504289 -61163716 + MER117 DNA MER1_type 29 197 0 720 208 13 0 chr20 5504339 5504493 -61163512 - MER3 DNA MER1_type 0 2585 2430 470 177 0 0 chr20 5504491 5504570 -61163435 - MER3 DNA MER1_type -92 117 39 * 331 299 24 24 chr20 5504570 5504697 -61163308 - MIR3 SINE MIR -12 196 70 2535 186 38 30 chr20 5504747 5505248 -61162757 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr20 5506061 5506082 -61161923 + AT_rich Low_complexity Low_complexity 1 21 0 414 289 44 13 chr20 5506142 5506301 -61161704 - MIR3 SINE MIR -11 197 34 850 294 82 8 chr20 5506903 5507257 -61160748 + L1M4 LINE L1 4970 5349 -797 2343 93 0 3 chr20 5507569 5507870 -61160135 + AluY SINE Alu 1 300 -11 577 166 83 78 chr20 5507874 5508018 -61159987 + Charlie2 DNA MER1_type 2654 2801 -61 2187 165 40 3 chr20 5508018 5508370 -61159635 - MLT1A1 LTR MaLR 0 365 1 577 166 83 78 chr20 5508370 5508430 -61159575 + Charlie2 DNA MER1_type 2801 2859 -3 2445 73 0 0 chr20 5509066 5509369 -61158636 - AluY SINE Alu -8 303 1 200 256 0 0 chr20 5509721 5509764 -61158241 - L3 LINE CR1 -3 1574 1532 540 248 88 44 chr20 5510145 5510284 -61157721 + MIR SINE MIR 24 178 -84 2412 219 56 19 chr20 5510284 5510804 -61157201 + MLT1F LTR MaLR 4 542 0 540 248 88 44 chr20 5510804 5510890 -61157115 + MIR SINE MIR 178 259 -3 27 29 0 0 chr20 5511329 5511363 -61156642 + AT_rich Low_complexity Low_complexity 1 34 0 336 248 103 8 chr20 5511951 5512068 -61155937 - MIR SINE MIR -75 187 60 590 135 198 18 chr20 5512173 5512284 -61155721 + FLAM_C SINE Alu 1 131 -2 278 111 111 0 chr20 5512306 5512360 -61155645 - L1MB1 LINE L1 0 6168 6109 5196 127 10 6 chr20 5512398 5513115 -61154890 - MER72 LTR ERV1 0 722 3 1058 173 0 0 chr20 5513265 5513433 -61154572 + LTR54 LTR ERV1 1 168 -342 2327 184 108 30 chr20 5513470 5514007 -61153998 + LTR8 LTR ERV1 113 691 0 518 202 32 0 chr20 5514012 5514136 -61153869 + LTR54B LTR ERV1 365 492 -6 2574 158 40 40 chr20 5514271 5514777 -61153228 - MER34C LTR ERV1 -79 506 1 2272 105 3 0 chr20 5515221 5515517 -61152488 - AluSg SINE Alu -13 297 1 2625 166 66 130 chr20 5515746 5516523 -61151482 - LTR8A LTR ERV1 0 727 1 1995 151 169 17 chr20 5516557 5516960 -61151045 - MER31B LTR ERV1 0 466 3 257 241 69 23 chr20 5517252 5517339 -61150666 + L1ME3A LINE L1 5970 6060 -110 1896 128 35 25 chr20 5517522 5517804 -61150201 + THE1B LTR MaLR 80 364 0 511 333 56 17 chr20 5517806 5518217 -61149788 + L1M4 LINE L1 4743 5169 -977 652 226 99 32 chr20 5518283 5518504 -61149501 + L2 LINE L2 1342 1577 -1737 4124 139 77 9 chr20 5518514 5519174 -61148831 + MER39 LTR ERV1 3 707 0 1663 275 125 27 chr20 5519203 5519489 -61148516 + L2 LINE L2 2244 2501 -812 1954 146 3 3 chr20 5519489 5519776 -61148229 + AluJo SINE Alu 1 287 -25 279 0 0 0 chr20 5519777 5519808 -61148197 + (CA)n Simple_repeat Simple_repeat 2 32 0 1663 275 125 27 chr20 5519808 5520360 -61147645 + L2 LINE L2 2500 3162 -151 275 253 0 40 chr20 5521512 5521587 -61146418 - L1MD2 LINE L1 -262 6097 6026 1613 179 137 23 chr20 5521588 5521974 -61146031 - MER45B DNA AcHobo 0 1040 611 396 221 176 22 chr20 5522450 5522586 -61145419 + MIR SINE MIR 3 159 -103 351 190 220 0 chr20 5522598 5522698 -61145307 - L1ME3A LINE L1 -1 6169 6048 355 233 14 0 chr20 5522722 5522795 -61145210 + MIR SINE MIR 168 241 -21 23 0 0 0 chr20 5524221 5524244 -61143761 + AT_rich Low_complexity Low_complexity 1 23 0 180 77 0 0 chr20 5524323 5524349 -61143656 + (TG)n Simple_repeat Simple_repeat 2 27 0 1166 274 100 52 chr20 5525084 5525583 -61142422 + MLT1G1 LTR MaLR 73 595 0 801 189 8 0 chr20 5526572 5526699 -61141306 - FLAM_C SINE Alu -14 129 2 198 244 35 58 chr20 5526890 5526976 -61141029 + MIR SINE MIR 173 256 -6 256 271 8 17 chr20 5527011 5527129 -61140876 + (TA)n Simple_repeat Simple_repeat 1 117 0 186 133 0 0 chr20 5527523 5527553 -61140452 + (ATG)n Simple_repeat Simple_repeat 3 32 0 183 288 51 0 chr20 5527557 5527616 -61140389 - MIR SINE MIR -8 254 193 193 318 162 26 chr20 5527652 5527806 -61140199 - MIR3 SINE MIR -17 191 17 235 176 39 20 chr20 5527960 5528011 -61139994 + L1ME2 LINE L1 5998 6049 -115 2198 100 0 61 chr20 5528017 5528347 -61139658 + AluSx SINE Alu 1 310 -2 241 248 15 128 chr20 5528352 5528485 -61139520 + L1ME2 LINE L1 6038 6155 -9 493 108 14 0 chr20 5528550 5528624 -61139381 - MSTB1 LTR MaLR 0 426 352 4902 14 0 0 chr20 5528624 5529529 -61138476 - L1P1 LINE L1 -422 5733 4829 3715 17 0 0 chr20 5529528 5529945 -61138060 + L1HS LINE L1 5739 6155 0 * 24 0 0 0 chr20 5529945 5529969 -61138036 + AT_rich Low_complexity Low_complexity 1 24 0 1141 165 151 58 chr20 5529969 5530396 -61137609 - MSTB1 LTR MaLR -55 377 1 21 36 0 0 chr20 5530789 5530817 -61137188 + AT_rich Low_complexity Low_complexity 1 28 0 15532 158 33 17 chr20 5531525 5533836 -61134169 + L1MA4A LINE L1 857 3131 -3874 858 165 0 15 chr20 5533836 5533969 -61134036 + FLAM_C SINE Alu 1 131 -2 15532 158 33 17 chr20 5533969 5535696 -61132309 + L1MA4A LINE L1 3131 4830 -2175 2271 113 0 3 chr20 5535696 5535996 -61132009 + AluSc SINE Alu 1 299 -10 15532 158 33 17 chr20 5535996 5538005 -61130000 + L1MA4A LINE L1 4830 7003 -2 485 284 152 52 chr20 5538049 5538918 -61129087 + L1 LINE L1 2187 3142 -3004 368 285 85 41 chr20 5538932 5539178 -61128827 + L1 LINE L1 3195 3451 -2695 1141 287 6 33 chr20 5539599 5539965 -61128040 + MER90 LTR ERV1 258 613 -1 1800 181 10 0 chr20 5540080 5540389 -61127616 + AluJb SINE Alu 1 312 0 181 216 27 0 chr20 5540975 5541012 -61126993 - L2 LINE L2 -25 3247 3210 397 326 52 17 chr20 5541021 5541081 -61126924 - MER5A DNA MER1_type -3 186 130 1743 181 3 30 chr20 5541081 5541385 -61126620 - AluJo SINE Alu -16 296 1 397 326 52 17 chr20 5541385 5541496 -61126509 - MER5A DNA MER1_type -59 130 9 304 308 115 0 chr20 5541536 5541640 -61126365 + MER5B DNA MER1_type 1 116 -62 390 331 51 6 chr20 5541673 5541830 -61126175 - MIR SINE MIR -94 168 5 5712 55 1 12 chr20 5542502 5543188 -61124817 - L1PA7 LINE L1 0 6154 5476 8849 80 4 2 chr20 5543192 5544460 -61123545 + L1PA7 LINE L1 4214 5482 -690 464 262 32 24 chr20 5545742 5545868 -61122137 + MER5B DNA MER1_type 4 130 -48 816 193 17 33 chr20 5545874 5546055 -61121950 - MER5B DNA MER1_type 0 178 1 265 86 0 0 chr20 5548161 5548196 -61119809 + U1 snRNA snRNA 1 35 -130 260 367 148 33 chr20 5548306 5548576 -61119429 + L2 LINE L2 2886 3186 -86 688 265 101 14 chr20 5549644 5549994 -61118011 + LTR33 LTR ERVL 49 513 -8 190 306 24 47 chr20 5550408 5550493 -61117512 + L2 LINE L2 2890 2972 -300 2179 148 98 25 chr20 5550697 5551096 -61116909 - MSTA LTR MaLR 0 428 1 8603 162 26 60 chr20 5551096 5552804 -61115201 - MSTA-int LTR MaLR 0 1651 2 51 17 0 0 chr20 5552874 5552932 -61115073 + AT_rich Low_complexity Low_complexity 1 58 0 2276 129 59 38 chr20 5552932 5553304 -61114701 - MSTA LTR MaLR -48 380 1 1241 172 89 41 chr20 5553674 5554120 -61113885 + LTR55 LTR ERV 1 519 -29 675 310 130 43 chr20 5555046 5555630 -61112375 + L2 LINE L2 252 886 -2428 286 229 203 8 chr20 5556106 5556224 -61111781 + MIR SINE MIR 72 212 -50 215 225 14 0 chr20 5556342 5556413 -61111592 + (TGAA)n Simple_repeat Simple_repeat 3 74 0 347 321 23 0 chr20 5556580 5556711 -61111294 - MIR SINE MIR -70 192 59 404 207 23 0 chr20 5556783 5556870 -61111135 - LTR16A LTR ERVL -218 232 144 4153 171 76 36 chr20 5557612 5558441 -61109564 - MER21B LTR ERV1 0 863 2 1702 100 4 13 chr20 5558627 5558857 -61109148 + AluSx SINE Alu 1 228 -84 24 0 0 0 chr20 5559049 5559073 -61108932 + AT_rich Low_complexity Low_complexity 1 24 0 526 206 18 88 chr20 5559694 5559864 -61108141 - L1ME3 LINE L1 -2 6160 6003 208 360 202 0 chr20 5560420 5560623 -61107382 - MIR SINE MIR -5 257 14 1812 194 93 63 chr20 5561597 5561740 -61106265 + MLT2B1 LTR ERVL 1 138 -382 2152 120 37 35 chr20 5561740 5562114 -61105891 + THE1C LTR MaLR 1 375 0 1812 194 93 63 chr20 5562114 5562475 -61105530 + MLT2B1 LTR ERVL 138 520 0 468 218 0 0 chr20 5562567 5562668 -61105337 - MER5A DNA MER1_type -80 109 9 1464 258 52 31 chr20 5563378 5563823 -61104182 - MER115 DNA AcHobo -4 689 236 2593 124 48 10 chr20 5564133 5564545 -61103460 - MSTA LTR MaLR 0 428 1 222 316 0 13 chr20 5565081 5565160 -61102845 + L2 LINE L2 3173 3250 -22 316 257 65 41 chr20 5565278 5565494 -61102511 + MLT1H LTR MaLR 19 247 -162 1376 177 52 72 chr20 5565591 5565896 -61102109 + AluJo SINE Alu 1 299 -13 257 222 14 17 chr20 5565918 5566010 -61101995 + MLT1J2 LTR MaLR 364 624 -2 10566 25 1 0 chr20 5566247 5568235 -61099770 - L1PA3 LINE L1 0 6155 4167 2510 123 9 61 chr20 5568236 5568572 -61099433 - MER34B LTR ERV1 -163 402 91 2231 115 0 13 chr20 5568572 5568877 -61099128 - AluSx SINE Alu -11 301 1 2510 123 9 61 chr20 5568877 5568964 -61099041 - MER34B LTR ERV1 -474 91 1 184 143 0 24 chr20 5569080 5569122 -61098883 + L2 LINE L2 3273 3313 0 339 224 122 0 chr20 5569145 5569252 -61098753 - MIR3 SINE MIR -49 159 40 323 286 0 0 chr20 5569311 5569388 -61098617 + MER94 DNA DNA 2 78 -56 5582 153 16 19 chr20 5569388 5569506 -61098499 + L1PB3 LINE L1 4793 4910 -1244 2380 93 6 0 chr20 5569506 5569817 -61098188 - AluSp SINE Alu 0 313 1 5582 153 16 19 chr20 5569817 5571074 -61096931 + L1PB3 LINE L1 4910 6153 -1 2062 147 7 85 chr20 5571176 5571363 -61096642 + MLT1B LTR MaLR 1 138 -252 1598 183 52 3 chr20 5571363 5571653 -61096352 + AluJb SINE Alu 5 308 -4 2062 147 7 85 chr20 5571653 5571888 -61096117 + MLT1B LTR MaLR 138 390 0 837 308 61 8 chr20 5572013 5572373 -61095632 + MLT2F LTR ERVL 4 382 -281 * 1791 175 64 63 chr20 5572367 5572769 -61095236 - MLT1D LTR MaLR -82 385 3 566 292 139 17 chr20 5573101 5573454 -61094551 + HAL1 LINE L1 2074 2469 -38 2240 114 0 64 chr20 5574480 5574840 -61093165 - MER1B DNA MER1_type 0 337 1 2273 102 0 0 chr20 5576093 5576400 -61091605 + AluSx SINE Alu 1 307 0 475 285 50 53 chr20 5576549 5576776 -61091229 - MIR SINE MIR -14 248 22 1129 209 0 5 chr20 5577050 5577261 -61090744 + MER63A DNA MER1_type 1 210 0 2095 139 0 3 chr20 5577574 5577877 -61090128 + AluSx SINE Alu 1 302 -10 2412 103 0 0 chr20 5578681 5578993 -61089012 - AluSx SINE Alu 0 312 1 2389 173 48 52 chr20 5581205 5581721 -61086284 - MLT2B2 LTR ERVL 0 515 2 743 164 0 16 chr20 5583846 5583974 -61084031 + FLAM_C SINE Alu 1 126 -17 433 305 108 0 chr20 5584176 5584343 -61083662 + MIR SINE MIR 4 188 -74 3773 221 73 44 chr20 5584592 5585308 -61082697 - L1MC3 LINE L1 0 7807 7113 192 97 0 0 chr20 5585308 5585339 -61082666 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 3773 221 73 44 chr20 5585339 5586072 -61081933 - L1MC3 LINE L1 -694 7113 6403 342 0 0 0 chr20 5586072 5586110 -61081895 + (TC)n Simple_repeat Simple_repeat 2 39 0 * 369 0 0 0 chr20 5586109 5586150 -61081855 + (TA)n Simple_repeat Simple_repeat 2 42 0 3773 221 73 44 chr20 5586110 5586304 -61081701 - L1MC3 LINE L1 -1404 6403 6272 2253 124 0 0 chr20 5586588 5586887 -61081118 + AluSx SINE Alu 1 299 -13 7734 129 2 11 chr20 5587145 5588122 -61079883 - L1PA10 LINE L1 0 6168 5184 2283 120 0 3 chr20 5588122 5588430 -61079575 - AluSg SINE Alu -3 307 1 7734 129 2 11 chr20 5588430 5589438 -61078567 - L1PA10 LINE L1 -984 5184 4185 5657 144 1 7 chr20 5589438 5590360 -61077645 + L1PA10 LINE L1 3261 4177 -1969 2155 128 103 30 chr20 5591456 5591855 -61076150 + MSTA LTR MaLR 1 428 0 22 70 0 0 chr20 5592380 5592423 -61075582 + AT_rich Low_complexity Low_complexity 1 43 0 216 182 23 0 chr20 5593040 5593084 -61074921 + MIR SINE MIR 108 152 -56 2114 217 97 4 chr20 5593992 5594476 -61073529 - MLT1F LTR MaLR -13 529 1 2138 117 0 0 chr20 5595401 5595714 -61072291 - AluSg SINE Alu 0 313 1 186 289 12 36 chr20 5595820 5595903 -61072102 - MIR SINE MIR -56 206 126 34 42 0 0 chr20 5596113 5596161 -61071844 + AT_rich Low_complexity Low_complexity 1 48 0 212 274 69 10 chr20 5596747 5596849 -61071156 - MIR SINE MIR -65 143 36 493 107 0 12 chr20 5596941 5597025 -61070980 - Alu SINE Alu 0 312 230 2647 153 35 31 chr20 5597869 5598298 -61069707 - LTR34 LTR ERV1 0 699 266 2217 117 0 16 chr20 5598298 5598435 -61069570 + AluSx SINE Alu 1 139 -173 2281 116 10 0 chr20 5598435 5598737 -61069268 + AluSq SINE Alu 1 305 -8 2217 117 0 16 chr20 5598737 5598906 -61069099 + AluSx SINE Alu 139 302 -10 2647 153 35 31 chr20 5598906 5598958 -61069047 - LTR34 LTR ERV1 -433 266 216 1669 174 17 17 chr20 5598958 5599252 -61068753 - MER41D LTR ERV1 0 557 264 667 143 29 0 chr20 5599254 5599359 -61068646 + FLAM_C SINE Alu 11 118 -25 252 156 0 0 chr20 5599383 5599406 -61068599 + A-rich Low_complexity Low_complexity 1 23 -22 2542 68 0 0 chr20 5599406 5599717 -61068288 + AluY SINE Alu 1 311 0 252 156 0 0 chr20 5599717 5599738 -61068267 + A-rich Low_complexity Low_complexity 22 45 0 1509 185 9 56 chr20 5599743 5600062 -61067943 + AluJb SINE Alu 1 304 -8 320 176 15 0 chr20 5600069 5600137 -61067868 + GA-rich Low_complexity Low_complexity 3 71 0 1781 138 4 0 chr20 5600139 5600408 -61067597 - MER41D LTR ERV1 -283 274 5 1347 106 63 0 chr20 5600405 5600612 -61067393 - LTR34 LTR ERV1 -479 220 1 * 204 40 0 0 chr20 5600845 5600870 -61067135 + (CCCCCT)n Simple_repeat Simple_repeat 4 28 0 6404 62 5 290 chr20 5600874 5602705 -61065300 + SVA Other Other 61 1369 -17 414 0 0 0 chr20 5602712 5602758 -61065247 + (TA)n Simple_repeat Simple_repeat 2 47 0 6952 125 41 56 chr20 5602784 5603150 -61064855 - LTR49-int LTR ERV1 -352 5979 5609 2243 115 3 0 chr20 5603150 5603445 -61064560 + AluSx SINE Alu 1 296 -16 6952 125 41 56 chr20 5603445 5603658 -61064347 - LTR49-int LTR ERV1 -722 5609 5394 1486 188 94 0 chr20 5603658 5603935 -61064070 - AluJo SINE Alu -7 305 3 6952 125 41 56 chr20 5603935 5604082 -61063923 - LTR49-int LTR ERV1 -937 5394 5246 1860 160 3 20 chr20 5604082 5604388 -61063617 + AluJb SINE Alu 1 301 -11 6952 125 41 56 chr20 5604388 5604818 -61063187 - LTR49-int LTR ERV1 -1085 5246 4811 2412 94 0 3 chr20 5604818 5605115 -61062890 + AluSx SINE Alu 1 296 -16 6952 125 41 56 chr20 5605115 5605261 -61062744 - LTR49-int LTR ERV1 -1520 4811 4694 1811 179 7 3 chr20 5605261 5605562 -61062443 - AluJb SINE Alu -10 302 1 6952 125 41 56 chr20 5605562 5605637 -61062368 - LTR49-int LTR ERV1 -1637 4694 4619 29685 113 14 56 chr20 5605637 5606779 -61061226 - L1PA8 LINE L1 -2 6170 4982 2327 113 0 0 chr20 5606779 5607079 -61060926 - AluSq SINE Alu -13 300 1 29685 113 14 56 chr20 5607079 5612375 -61055630 - L1PA8 LINE L1 -1190 4982 7 3174 129 19 19 chr20 5612377 5612972 -61055033 - LTR49-int LTR ERV1 -1700 4631 4037 1323 174 24 120 chr20 5613026 5613637 -61054368 + MER52A LTR ERV1 660 1349 -406 310 235 15 52 chr20 5613627 5613763 -61054242 + LTR28 LTR ERV1 586 716 -304 * 1952 224 65 46 chr20 5613737 5614276 -61053729 + MER52A LTR ERV1 1207 1755 0 189 305 57 29 chr20 5615064 5615169 -61052836 + MIR SINE MIR 16 123 -85 405 305 61 12 chr20 5615350 5615514 -61052491 - MIR SINE MIR 0 262 91 202 313 96 26 chr20 5615558 5615673 -61052332 + MER5A DNA MER1_type 1 123 -66 201 341 0 33 chr20 5615604 5615695 -61052310 - MER5A DNA MER1_type -44 145 58 * 708 269 34 24 chr20 5615733 5615970 -61052035 + MLT1G1 LTR MaLR 4 198 -369 299 129 8 220 chr20 5616069 5616142 -61051863 - L1ME3A LINE L1 -18 6152 6118 2384 106 0 6 chr20 5616142 5616453 -61051552 - AluSq SINE Alu -4 309 1 299 129 8 220 chr20 5616453 5616511 -61051494 - L1ME3A LINE L1 -52 6118 6049 * 3437 154 53 44 chr20 5616500 5617257 -61050748 + L1MB3 LINE L1 5259 6016 -167 196 271 94 0 chr20 5617278 5617363 -61050642 + MIR SINE MIR 40 132 -76 1144 166 0 44 chr20 5617431 5617636 -61050369 + AluJb SINE Alu 111 306 -6 325 331 48 14 chr20 5618279 5618424 -61049581 + MER5B DNA MER1_type 17 166 -12 221 232 0 93 chr20 5618490 5618641 -61049364 + (CACCAT)n Simple_repeat Simple_repeat 4 140 0 468 203 198 56 chr20 5620717 5620871 -61047134 - ORSL DNA AcHobo -9 266 135 2136 110 7 0 chr20 5620871 5621163 -61046842 - AluY SINE Alu -16 295 2 468 203 198 56 chr20 5621163 5621240 -61046765 - ORSL DNA AcHobo -140 135 2 193 284 20 69 chr20 5621292 5621394 -61046611 - L2 LINE L2 -2111 1203 1107 375 281 79 9 chr20 5623604 5623718 -61044287 + MIR SINE MIR 45 166 -96 7395 51 1 0 chr20 5624541 5625700 -61042305 + L1PA5 LINE L1 4995 6154 0 227 304 83 83 chr20 5626153 5626429 -61041576 - L2 LINE L2 -30 3242 2967 2182 120 7 13 chr20 5626583 5626883 -61041122 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr20 5627422 5627444 -61040561 + AT_rich Low_complexity Low_complexity 1 22 0 782 196 0 7 chr20 5627586 5627724 -61040281 - AluJb SINE Alu -18 294 158 2200 173 40 43 chr20 5627724 5627870 -61040135 + L1M4 LINE L1 4973 5118 -1066 1696 160 0 67 chr20 5627870 5628183 -61039822 + AluJo SINE Alu 1 292 -20 2200 173 40 43 chr20 5628183 5628642 -61039363 + L1M4 LINE L1 5118 5577 -607 1944 155 3 16 chr20 5628642 5628946 -61039059 + AluJb SINE Alu 1 300 -12 2200 173 40 43 chr20 5628946 5629012 -61038993 + L1M4 LINE L1 5577 5642 -542 2286 88 3 3 chr20 5629012 5629324 -61038681 + AluSq SINE Alu 1 312 0 2200 173 40 43 chr20 5629324 5629501 -61038504 + L1M4 LINE L1 5642 5819 -365 267 254 15 15 chr20 5629506 5629573 -61038432 + AluS SINE Alu 1 67 -236 253 123 154 46 chr20 5629684 5629749 -61038256 - MER51A LTR ERV1 -94 540 469 546 270 8 0 chr20 5630024 5630150 -61037855 - MER89-int LTR ERV1 0 7816 7690 1104 318 45 37 chr20 5630363 5631165 -61036840 - MER89-int LTR ERV1 -1488 6268 5461 21 0 0 0 chr20 5632342 5632363 -61035642 + GC_rich Low_complexity Low_complexity 1 21 0 329 278 56 56 chr20 5632690 5632834 -61035171 + HAL1 LINE L1 2363 2506 -1 279 321 128 14 chr20 5633131 5633427 -61034578 + LTR16B LTR ERVL 124 453 -11 203 313 83 90 chr20 5635303 5635591 -61032414 - L2 LINE L2 -30 3242 2957 2214 110 0 3 chr20 5635938 5636230 -61031775 - AluSg SINE Alu -14 296 6 32 0 0 0 chr20 5636750 5636782 -61031223 + AT_rich Low_complexity Low_complexity 1 32 0 1268 322 58 7 chr20 5636827 5637672 -61030333 - HERVL40 LTR ERVL -431 5333 4417 2842 314 42 14 chr20 5637690 5638633 -61029372 - HERVL40 LTR ERVL -1947 3707 2703 2485 100 3 0 chr20 5638633 5638944 -61029061 - AluSp SINE Alu -1 312 1 2842 314 42 14 chr20 5638944 5639404 -61028601 - HERVL40 LTR ERVL -2951 2703 2258 2097 201 91 20 chr20 5639419 5639569 -61028436 - REP3 LTR ERV -30 532 394 447 19 0 0 chr20 5639569 5639621 -61028384 + (CA)n Simple_repeat Simple_repeat 2 53 0 2097 201 91 20 chr20 5639621 5639967 -61028038 - REP3 LTR ERV -168 394 1 409 333 0 0 chr20 5640183 5640309 -61027696 - MER89-int LTR ERV1 -406 6395 6270 379 342 54 43 chr20 5641390 5641835 -61026170 - HERVL40 LTR ERVL -2307 3223 2774 290 233 0 0 chr20 5642617 5642677 -61025328 + MER77 LTR ERV1 9 68 -537 52 0 0 0 chr20 5642845 5642897 -61025108 + AT_rich Low_complexity Low_complexity 1 52 0 1191 167 5 10 chr20 5643755 5643994 -61024011 - AluJb SINE Alu 0 330 93 614 192 0 0 chr20 5644060 5644159 -61023846 - AluJb SINE Alu -213 99 1 202 298 138 11 chr20 5644317 5644411 -61023594 + L2 LINE L2 3137 3242 -30 599 175 15 216 chr20 5644456 5644725 -61023280 - MER51A LTR ERV1 0 640 426 295 298 144 33 chr20 5645989 5646288 -61021717 - LTR16B LTR ERVL -9 455 124 180 211 56 100 chr20 5647577 5647667 -61020338 + MIR SINE MIR 63 148 -114 292 299 28 19 chr20 5648893 5649000 -61019005 - MIR SINE MIR -121 141 34 185 281 16 94 chr20 5651198 5651326 -61016679 + L2 LINE L2 1107 1224 -2090 470 197 171 63 chr20 5651352 5651429 -61016576 + ORSL DNA AcHobo 2 69 -206 2249 110 7 0 chr20 5651429 5651737 -61016268 + AluY SINE Alu 2 311 0 470 197 171 63 chr20 5651737 5651793 -61016212 + ORSL DNA AcHobo 69 118 -157 2287 56 42 7 chr20 5651793 5652078 -61015927 + AluY SINE Alu 1 295 -16 470 197 171 63 chr20 5652078 5652182 -61015823 + ORSL DNA AcHobo 118 266 -9 704 153 0 30 chr20 5653347 5653408 -61014597 - L1MB7 LINE L1 -10 6174 6113 1913 120 0 57 chr20 5653408 5653734 -61014271 + AluSx SINE Alu 1 309 0 704 153 0 30 chr20 5653734 5653802 -61014203 - L1MB7 LINE L1 -71 6113 6048 439 167 0 13 chr20 5653810 5653888 -61014117 - FLAM SINE Alu -23 120 44 2477 179 42 40 chr20 5653965 5654203 -61013802 - L1MB7 LINE L1 -366 5818 5582 1692 171 54 7 chr20 5654203 5654384 -61013621 - AluJb SINE Alu 0 312 110 321 47 0 0 chr20 5654384 5654427 -61013578 + (TTTG)n Simple_repeat Simple_repeat 4 46 0 1692 171 54 7 chr20 5654427 5654543 -61013462 - AluJb SINE Alu -202 110 1 2477 179 42 40 chr20 5654543 5654998 -61013007 - L1MB7 LINE L1 -602 5582 5129 1884 136 3 39 chr20 5654998 5655306 -61012699 - AluJo SINE Alu -15 297 1 2477 179 42 40 chr20 5655306 5655340 -61012665 - L1MB7 LINE L1 -1055 5129 5097 2392 74 24 0 chr20 5655340 5655636 -61012369 + AluSp SINE Alu 1 303 -10 2477 179 42 40 chr20 5655636 5655763 -61012242 - L1MB7 LINE L1 -1087 5097 4967 871 169 0 0 chr20 5655763 5655905 -61012100 + AluJb SINE Alu 160 301 -11 1657 150 15 4 chr20 5655905 5656165 -61011840 + AluSx SINE Alu 1 263 -49 22 35 0 0 chr20 5656178 5656207 -61011798 + AT_rich Low_complexity Low_complexity 1 29 0 197 262 0 0 chr20 5657138 5657180 -61010825 + L2 LINE L2 3137 3178 -94 2408 100 7 0 chr20 5657183 5657493 -61010512 + AluSq SINE Alu 1 312 -1 251 83 0 21 chr20 5657503 5657551 -61010454 + (CAAG)n Simple_repeat Simple_repeat 2 48 0 876 140 0 22 chr20 5659298 5659434 -61008571 + AluJo/FLAM SINE Alu 1 133 -169 2282 99 3 0 chr20 5659437 5659729 -61008276 + AluSp SINE Alu 1 293 -20 526 182 141 35 chr20 5659902 5660100 -61007905 - LTR16B LTR ERVL 0 464 246 231 221 90 97 chr20 5660531 5660676 -61007329 - HAL1 LINE L1 -1 2506 2363 21 36 0 0 chr20 5661587 5661615 -61006390 + AT_rich Low_complexity Low_complexity 1 28 0 2269 113 3 0 chr20 5661828 5662139 -61005866 - AluSx SINE Alu 0 312 1 2088 128 0 13 chr20 5662148 5662452 -61005553 - AluSx SINE Alu -12 300 1 4388 52 0 0 chr20 5663109 5663644 -61004361 + L1PA5 LINE L1 3567 4101 -2045 * 8082 36 0 0 chr20 5663633 5664594 -61003411 - L1PA4 LINE L1 -892 5254 4294 7472 37 6 0 chr20 5664594 5665478 -61002527 + L1PA4 LINE L1 5257 6154 -1 30 0 0 0 chr20 5665478 5665508 -61002497 + AT_rich Low_complexity Low_complexity 1 30 0 11008 40 3 0 chr20 5665508 5667580 -61000425 + L1PA5 LINE L1 4080 6152 -2 2067 136 0 0 chr20 5667778 5668089 -60999916 + AluSp SINE Alu 4 314 0 14988 123 21 19 chr20 5668089 5669045 -60998960 + MER50-int LTR ERV1 4932 5885 -1320 2146 106 0 7 chr20 5669045 5669349 -60998656 + AluSp SINE Alu 1 302 0 14988 123 21 19 chr20 5669349 5670653 -60997352 + MER50-int LTR ERV1 5885 7197 -8 4407 137 27 16 chr20 5670653 5671356 -60996649 + MER50 LTR ERV1 1 711 -23 663 230 149 30 chr20 5671470 5671769 -60996236 + L1ME LINE L1 5485 5809 -353 1737 174 0 39 chr20 5672093 5672266 -60995739 - AluJb SINE Alu -14 298 141 2366 103 0 3 chr20 5672266 5672567 -60995438 - AluSg SINE Alu -10 300 1 1737 174 0 39 chr20 5672567 5672703 -60995302 - AluJb SINE Alu -171 141 1 1415 161 124 18 chr20 5672706 5672979 -60995026 - AluJo SINE Alu -10 302 1 22 0 0 0 chr20 5672980 5673002 -60995003 + AT_rich Low_complexity Low_complexity 1 22 0 1192 146 92 5 chr20 5673263 5673469 -60994536 + AluJb SINE Alu 87 310 -2 561 68 0 0 chr20 5673471 5673545 -60994460 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 499 218 10 0 chr20 5673747 5673848 -60994157 + FLAM_A SINE Alu 23 124 -18 2334 89 27 0 chr20 5673849 5674142 -60993863 + AluSx SINE Alu 1 301 -11 2240 79 18 0 chr20 5674170 5674489 -60993516 + AluSp SINE Alu 1 324 0 880 246 18 7 chr20 5675300 5675580 -60992425 + L1MC/D LINE L1 2805 3087 -3059 761 150 0 88 chr20 5675590 5675737 -60992268 + FLAM_C SINE Alu 10 143 0 1678 240 48 50 chr20 5675737 5676336 -60991669 + L1MC/D LINE L1 3091 3688 -2458 2184 105 3 16 chr20 5676336 5676640 -60991365 + AluSx SINE Alu 1 300 -12 1739 158 37 10 chr20 5676650 5676948 -60991057 + AluJo SINE Alu 1 306 -6 754 199 18 12 chr20 5676949 5677115 -60990890 + L1MC/D LINE L1 5599 5765 -477 225 0 0 0 chr20 5677857 5677882 -60990123 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 848 110 0 0 chr20 5677886 5678004 -60990001 - FLAM_C SINE Alu -15 118 1 241 307 52 13 chr20 5678168 5678321 -60989684 - MIR SINE MIR -39 223 65 2273 108 13 0 chr20 5678701 5679008 -60988997 - AluSp SINE Alu -2 311 1 1770 133 22 65 chr20 5679074 5679396 -60988609 - AluJo SINE Alu -4 308 1 814 147 0 0 chr20 5679434 5679550 -60988455 - AluJb SINE Alu -196 116 1 1043 296 181 21 chr20 5679736 5680554 -60987451 - L2 LINE L2 -1992 1322 374 972 182 42 0 chr20 5680561 5680753 -60987252 + Charlie5 DNA MER1_type 1 200 -2412 1875 126 3 87 chr20 5680765 5680898 -60987107 + AluJo SINE Alu 1 144 -168 1437 137 166 0 chr20 5680898 5681162 -60986843 + AluSg1 SINE Alu 1 304 0 1875 126 3 87 chr20 5681162 5681361 -60986644 + AluJo SINE Alu 144 306 -6 33 0 0 0 chr20 5681923 5681956 -60986049 + AT_rich Low_complexity Low_complexity 1 33 0 813 138 14 179 chr20 5681967 5682191 -60985814 + Charlie5 DNA MER1_type 2337 2502 -83 1495 186 4 4 chr20 5682191 5682438 -60985567 + AluJb SINE Alu 1 247 -65 813 138 14 179 chr20 5682438 5682510 -60985495 + Charlie5 DNA MER1_type 2502 2584 -1 591 268 71 20 chr20 5682514 5682768 -60985237 - L2 LINE L2 -2961 353 87 907 236 43 40 chr20 5682845 5682924 -60985081 - L2 LINE L2 -775 2539 2462 2489 88 0 0 chr20 5682924 5683232 -60984773 + AluSx SINE Alu 1 308 -4 907 236 43 40 chr20 5683232 5683500 -60984505 - L2 LINE L2 -852 2462 2191 523 183 77 0 chr20 5684244 5684348 -60983657 + FLAM_C SINE Alu 7 118 -25 36 40 0 0 chr20 5684348 5684398 -60983607 + AT_rich Low_complexity Low_complexity 1 50 0 347 284 20 10 chr20 5684463 5684565 -60983440 - MIR SINE MIR -63 145 43 192 125 0 0 chr20 5684570 5684602 -60983403 + (T)n Simple_repeat Simple_repeat 1 32 0 308 250 160 56 chr20 5684615 5684759 -60983246 - L1MC5 LINE L1 -48 7913 7755 270 205 13 93 chr20 5684811 5684962 -60983043 - L1MC5 LINE L1 -195 7766 7628 1184 110 29 131 chr20 5684977 5685222 -60982783 - AluYb8 SINE Alu -15 303 84 755 219 35 42 chr20 5685250 5685538 -60982467 - L1MC5 LINE L1 -366 7595 7310 349 293 23 38 chr20 5685677 5685870 -60982135 - L1MC4 LINE L1 -725 7236 7068 1722 181 13 10 chr20 5685870 5686174 -60981831 + AluJb SINE Alu 2 306 -6 265 187 27 13 chr20 5686179 5686254 -60981751 + GA-rich Low_complexity Low_complexity 3 78 0 642 227 50 69 chr20 5686255 5686572 -60981433 - L1MC5 LINE L1 -887 7074 6764 2202 106 0 26 chr20 5686698 5687000 -60981005 + AluSg SINE Alu 1 294 -16 1754 166 0 7 chr20 5687012 5687295 -60980710 + AluJb SINE Alu 1 281 -31 327 169 17 0 chr20 5687867 5687926 -60980079 + FRAM/FAM SINE Alu 1 59 -107 2952 180 98 52 chr20 5688092 5688787 -60979218 + LTR8A LTR ERV1 1 727 0 2034 128 51 0 chr20 5689052 5689348 -60978657 - AluSx SINE Alu -1 311 1 1886 207 111 47 chr20 5689349 5689484 -60978521 - L1MC/D LINE L1 -743 5403 5278 904 153 70 13 chr20 5689484 5689641 -60978364 - FRAM SINE Alu 0 166 1 1886 207 111 47 chr20 5689641 5689716 -60978289 - L1MC/D LINE L1 -868 5278 5209 1986 157 7 0 chr20 5689716 5690015 -60977990 - AluJb SINE Alu -11 301 1 1886 207 111 47 chr20 5690015 5690171 -60977834 - L1MC/D LINE L1 -937 5209 5064 1361 192 130 0 chr20 5690171 5690432 -60977573 - AluJo SINE Alu -7 295 1 1886 207 111 47 chr20 5690432 5690544 -60977461 - L1MC/D LINE L1 -1082 5064 4961 2324 99 24 0 chr20 5690544 5690838 -60977167 - AluSx SINE Alu -11 301 1 1886 207 111 47 chr20 5690838 5691108 -60976897 - L1MC/D LINE L1 -1185 4961 4642 1964 76 44 0 chr20 5691116 5691365 -60976640 - AluSq SINE Alu -53 260 1 34 42 0 0 chr20 5691450 5691498 -60976507 + AT_rich Low_complexity Low_complexity 1 48 0 434 238 20 79 chr20 5691555 5691757 -60976248 - L2 LINE L2 -893 2421 2232 219 238 25 50 chr20 5693036 5693116 -60974889 - L2 LINE L2 -68 3245 3168 226 333 49 0 chr20 5693828 5693909 -60974096 - L2 LINE L2 -50 3263 3179 25 31 0 0 chr20 5695950 5695982 -60972023 + AT_rich Low_complexity Low_complexity 1 32 0 552 284 47 43 chr20 5697110 5697342 -60970663 + HAL1 LINE L1 1 233 -2274 643 152 24 32 chr20 5698194 5698319 -60969686 + AluJb SINE Alu 182 305 -7 1687 239 144 55 chr20 5698322 5698458 -60969547 + HAL1 LINE L1 971 1094 -1413 1902 141 10 13 chr20 5698458 5698771 -60969234 + AluSx SINE Alu 1 312 0 1687 239 144 55 chr20 5698771 5699469 -60968536 + HAL1 LINE L1 1094 1879 -628 351 296 77 6 chr20 5699969 5700138 -60967867 + L1ME3A LINE L1 5690 5870 -300 236 94 0 0 chr20 5700187 5700219 -60967786 + Alu SINE Alu 179 210 -89 679 101 119 0 chr20 5700221 5700330 -60967675 + AluSg/x SINE Alu 177 298 -14 414 256 68 46 chr20 5700504 5700723 -60967282 + HAL1 LINE L1 2284 2507 0 27 0 0 0 chr20 5701189 5701216 -60966789 + AT_rich Low_complexity Low_complexity 1 27 0 31 26 0 0 chr20 5701520 5701558 -60966447 + AT_rich Low_complexity Low_complexity 1 38 0 310 133 0 0 chr20 5701571 5701616 -60966389 - Alu SINE Alu -258 45 1 9573 128 57 22 chr20 5701616 5702515 -60965490 + Tigger1 DNA MER2_type 35 901 -1517 2303 78 14 0 chr20 5702515 5702682 -60965323 - AluY SINE Alu -11 300 126 189 0 0 0 chr20 5702682 5702703 -60965302 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2303 78 14 0 chr20 5702703 5702831 -60965174 - AluY SINE Alu -185 126 1 9573 128 57 22 chr20 5702831 5703806 -60964199 + Tigger1 DNA MER2_type 901 1840 -578 2129 123 10 3 chr20 5703806 5704114 -60963891 + AluSx SINE Alu 1 310 -2 1944 125 30 20 chr20 5704122 5704425 -60963580 + AluSq SINE Alu 1 306 -7 9573 128 57 22 chr20 5704425 5704765 -60963240 + Tigger1 DNA MER2_type 1846 2324 -94 2337 80 7 0 chr20 5704765 5705051 -60962954 - AluSg SINE Alu -22 288 1 9573 128 57 22 chr20 5705051 5705150 -60962855 + Tigger1 DNA MER2_type 2324 2418 0 416 223 92 159 chr20 5705279 5705593 -60962412 - L2 LINE L2 -4 3309 3017 1127 295 120 13 chr20 5705618 5706240 -60961765 - L2 LINE L2 -410 2904 2137 304 276 38 48 chr20 5706249 5706354 -60961651 - MER5B DNA MER1_type -69 109 6 1940 142 6 22 chr20 5707468 5707784 -60960221 + AluSx SINE Alu 1 311 -1 1496 192 37 0 chr20 5707859 5708130 -60959875 + AluJb SINE Alu 7 287 -25 28 48 0 0 chr20 5708131 5708173 -60959832 + AT_rich Low_complexity Low_complexity 1 42 0 395 246 80 45 chr20 5708710 5708843 -60959162 - MIR3 SINE MIR -30 178 41 523 274 22 22 chr20 5709396 5709575 -60958430 + L2 LINE L2 3135 3313 0 2011 123 7 3 chr20 5710843 5711128 -60956877 - AluSx SINE Alu -25 287 2 242 393 0 0 chr20 5711221 5711305 -60956700 + MIR3 SINE MIR 5 88 -120 2435 64 10 0 chr20 5711530 5711826 -60956179 - AluY SINE Alu -12 299 1 930 211 0 0 chr20 5712052 5712223 -60955782 - AluJb SINE Alu -8 304 134 1320 183 11 53 chr20 5713093 5713378 -60954627 + AluJb SINE Alu 1 273 -39 186 71 0 0 chr20 5713382 5713410 -60954595 + (CA)n Simple_repeat Simple_repeat 1 28 0 1503 189 17 36 chr20 5713775 5714076 -60953929 - AluJo SINE Alu -17 295 1 256 326 136 0 chr20 5714696 5714828 -60953177 - L2 LINE L2 -17 3296 3147 180 243 86 57 chr20 5714923 5714993 -60953012 - MIR SINE MIR -161 101 30 255 152 0 0 chr20 5716110 5716156 -60951849 + A-rich Low_complexity Low_complexity 1 46 0 194 61 0 30 chr20 5716778 5716811 -60951194 + (TA)n Simple_repeat Simple_repeat 1 32 0 1939 112 18 28 chr20 5717170 5717475 -60950530 + AluSx SINE Alu 1 302 0 244 155 17 17 chr20 5717628 5717686 -60950319 + CT-rich Low_complexity Low_complexity 2 59 0 24 32 0 0 chr20 5718600 5718631 -60949374 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr20 5718974 5718995 -60949010 + (A)n Simple_repeat Simple_repeat 1 21 0 222 37 0 0 chr20 5719460 5719487 -60948518 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 2207 125 0 0 chr20 5720174 5720470 -60947535 + AluSx SINE Alu 1 296 -16 1758 171 4 0 chr20 5720490 5720753 -60947252 + AluJo SINE Alu 6 269 -43 469 218 45 26 chr20 5720914 5721070 -60946935 - MER104 DNA Tc2 -13 167 9 906 177 6 29 chr20 5721412 5721587 -60946418 - FRAM SINE Alu -9 167 1 2067 137 0 13 chr20 5721626 5721933 -60946072 - AluSx SINE Alu -9 303 1 1398 153 4 37 chr20 5722063 5722305 -60945700 + AluJb SINE Alu 63 296 -16 1740 157 14 10 chr20 5723008 5723301 -60944704 + AluJb SINE Alu 9 302 -10 275 217 61 6 chr20 5723596 5723676 -60944329 - MIR3 SINE MIR -35 173 88 324 102 0 0 chr20 5724574 5724623 -60943382 + (CA)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr20 5724645 5724673 -60943332 + AT_rich Low_complexity Low_complexity 1 28 0 2128 133 0 3 chr20 5724686 5724988 -60943017 + AluSg SINE Alu 1 301 -9 22 0 0 0 chr20 5725128 5725150 -60942855 + AT_rich Low_complexity Low_complexity 1 22 0 792 126 31 0 chr20 5725470 5725597 -60942408 + AluJ SINE Alu 1 131 -171 1509 88 0 0 chr20 5725601 5725793 -60942212 - AluSg SINE Alu -1 311 120 592 67 0 0 chr20 5725793 5725868 -60942137 - AluSg SINE Alu -234 75 1 1152 176 0 0 chr20 5725883 5726065 -60941940 + AluJ SINE Alu 131 312 0 24 60 0 30 chr20 5727429 5727454 -60940551 + AT_rich Low_complexity Low_complexity 1 25 -40 1877 149 14 0 chr20 5727454 5727743 -60940262 + AluJb SINE Alu 1 293 -19 24 60 0 30 chr20 5727743 5727784 -60940221 + AT_rich Low_complexity Low_complexity 25 65 0 2133 95 28 0 chr20 5727907 5728191 -60939814 - AluSx SINE Alu -16 296 5 355 82 0 0 chr20 5728192 5728241 -60939764 - Alu SINE Alu -250 50 2 2484 65 0 3 chr20 5728991 5729301 -60938704 + AluY SINE Alu 1 309 -2 1955 120 17 30 chr20 5729425 5729725 -60938280 - AluSx SINE Alu -16 296 1 297 0 0 0 chr20 5730362 5730395 -60937610 + (T)n Simple_repeat Simple_repeat 1 33 0 2813 3 0 10 chr20 5730450 5730764 -60937241 + AluY SINE Alu 1 311 0 2213 138 0 0 chr20 5731154 5731459 -60936546 + AluSx SINE Alu 1 305 -7 2169 94 37 3 chr20 5731500 5731799 -60936206 + AluSp SINE Alu 1 309 -4 1796 129 8 15 chr20 5731811 5732074 -60935931 + AluSq SINE Alu 1 261 -52 395 179 15 0 chr20 5732560 5732627 -60935378 - Tigger3(Golem) DNA MER2_type -1 3028 2961 501 220 0 0 chr20 5732641 5732732 -60935273 - Tigger3(Golem) DNA MER2_type -2938 91 1 204 97 0 0 chr20 5734162 5734193 -60933812 + (A)n Simple_repeat Simple_repeat 1 31 0 253 240 10 50 chr20 5735799 5735899 -60932106 - L1ME4a LINE L1 -59 6062 5967 2161 121 3 0 chr20 5735923 5736213 -60931792 - AluSg SINE Alu -19 291 1 2061 138 0 0 chr20 5736770 5737060 -60930945 + AluSx SINE Alu 1 290 -22 2312 113 0 0 chr20 5737092 5737401 -60930604 + AluSx SINE Alu 3 311 -1 2207 97 38 0 chr20 5737877 5738166 -60929839 + AluSp SINE Alu 1 300 -13 22 35 0 0 chr20 5738514 5738543 -60929462 + AT_rich Low_complexity Low_complexity 1 29 0 2172 108 3 10 chr20 5738806 5739101 -60928904 + AluSx SINE Alu 1 293 -19 353 298 43 0 chr20 5739913 5740007 -60927998 - MIR3 SINE MIR -30 178 81 222 289 126 15 chr20 5742067 5742202 -60925803 - L2 LINE L2 0 3313 3164 267 358 22 37 chr20 5742241 5742375 -60925630 - L2 LINE L2 -221 3051 2920 783 175 69 74 chr20 5742694 5742843 -60925162 + MER5A DNA MER1_type 2 151 -38 2236 84 3 14 chr20 5742843 5743139 -60924866 - AluY SINE Alu -18 293 1 783 175 69 74 chr20 5743139 5743178 -60924827 + MER5A DNA MER1_type 151 189 0 1194 151 34 0 chr20 5743298 5743504 -60924501 + Tigger1 DNA MER2_type 1 213 -2205 * 1482 138 20 0 chr20 5743502 5743748 -60924257 + Tigger1 DNA MER2_type 2003 2253 -165 601 62 0 0 chr20 5743764 5743876 -60924129 + L1PA6 LINE L1 6062 6173 0 2247 120 0 0 chr20 5743909 5744218 -60923787 + AluSg SINE Alu 2 310 0 416 288 46 20 chr20 5744429 5744582 -60923423 + MER5B DNA MER1_type 21 177 -1 1230 211 63 25 chr20 5744674 5744958 -60923047 + AluJo SINE Alu 3 297 -15 265 200 38 38 chr20 5745864 5745944 -60922061 - MER5C DNA MER1_type 0 324 245 469 229 8 34 chr20 5745993 5746111 -60921894 - MER5C DNA MER1_type -201 123 9 299 261 92 25 chr20 5746248 5746367 -60921638 - MIR3 SINE MIR -46 162 36 358 153 22 97 chr20 5746650 5746744 -60921261 + AluJo SINE Alu 48 125 -177 987 157 6 18 chr20 5746786 5746952 -60921053 + AluJo SINE Alu 118 281 -31 350 277 107 44 chr20 5746969 5747175 -60920830 + HAL1 LINE L1 2285 2503 -4 379 123 0 0 chr20 5747815 5747872 -60920133 + AluS SINE Alu 1 57 -244 1049 143 0 6 chr20 5747872 5748033 -60919972 + AluSg/x SINE Alu 140 299 -11 2078 126 7 0 chr20 5748114 5748400 -60919605 - AluSx SINE Alu -24 288 1 1686 127 3 121 chr20 5748821 5748953 -60919052 + AluSx SINE Alu 1 72 -230 1863 138 3 49 chr20 5748953 5749099 -60918906 + AluSx SINE Alu 1 127 -185 2229 97 14 0 chr20 5749099 5749388 -60918617 + AluSg SINE Alu 1 293 -17 1863 138 3 49 chr20 5749388 5749545 -60918460 + AluSx SINE Alu 127 290 -22 1686 127 3 121 chr20 5749545 5749742 -60918263 + AluSx SINE Alu 72 291 -11 788 197 56 0 chr20 5749762 5749904 -60918101 + FRAM SINE Alu 1 143 -33 2419 108 0 0 chr20 5749909 5750216 -60917789 - AluSx SINE Alu -5 307 1 331 283 177 79 chr20 5751146 5751243 -60916762 - L2 LINE L2 0 3272 3186 1976 154 0 22 chr20 5751243 5751554 -60916451 + AluSx SINE Alu 1 304 -8 2114 114 3 7 chr20 5751559 5751849 -60916156 + AluSg SINE Alu 1 289 -21 331 283 177 79 chr20 5751849 5752113 -60915892 - L2 LINE L2 -89 3183 2869 2453 92 0 0 chr20 5752291 5752594 -60915411 - AluSx SINE Alu -9 303 1 1370 196 76 11 chr20 5753207 5753322 -60914683 + AluJb SINE Alu 3 109 -203 288 0 0 0 chr20 5753322 5753354 -60914651 + (CA)n Simple_repeat Simple_repeat 2 33 0 1370 196 76 11 chr20 5753354 5753513 -60914492 + AluJb SINE Alu 109 295 -17 720 194 0 0 chr20 5753395 5753519 -60914486 + AluJb SINE Alu 178 301 -11 1803 84 9 0 chr20 5754047 5754274 -60913731 + AluSp SINE Alu 3 231 -82 931 209 65 10 chr20 5755100 5755301 -60912704 + MER20 DNA MER1_type 1 212 -7 2116 131 0 0 chr20 5755552 5755858 -60912147 + AluSx SINE Alu 1 306 -6 2039 107 45 0 chr20 5755858 5756148 -60911857 + AluSg SINE Alu 1 303 -7 929 155 37 0 chr20 5756225 5756386 -60911619 + AluSg/x SINE Alu 137 303 -9 227 211 47 47 chr20 5759252 5759380 -60908625 + (CCCGG)n Simple_repeat Simple_repeat 2 129 0 24 53 0 0 chr20 5759583 5759621 -60908384 + GC_rich Low_complexity Low_complexity 1 38 0 2308 54 14 3 chr20 5759848 5760142 -60907863 + AluSx SINE Alu 1 297 -15 225 202 155 24 chr20 5760334 5760418 -60907587 + MER5A DNA MER1_type 11 105 -84 2159 82 0 0 chr20 5760632 5760936 -60907069 + AluSc SINE Alu 2 305 0 1757 145 20 0 chr20 5761064 5761368 -60906637 + AluSx SINE Alu 1 310 -2 193 204 68 23 chr20 5761591 5761635 -60906370 - L2 LINE L2 -2 3311 3266 2226 90 3 28 chr20 5761844 5762165 -60905840 - AluSq SINE Alu 0 313 1 1450 103 70 0 chr20 5762337 5762551 -60905454 + MER30 DNA MER1_type 2 230 0 1942 130 0 7 chr20 5762599 5762898 -60905107 + AluSc SINE Alu 1 297 -12 1567 176 19 32 chr20 5763116 5763429 -60904576 - AluJb SINE Alu -3 309 1 234 189 0 0 chr20 5763638 5763675 -60904330 + MER57A LTR ERV1 303 339 -64 789 216 9 69 chr20 5763703 5763752 -60904253 + AluJb SINE Alu 82 132 -180 252 0 0 0 chr20 5763752 5763780 -60904225 + (TA)n Simple_repeat Simple_repeat 2 29 0 789 216 9 69 chr20 5763780 5763961 -60904044 + AluJb SINE Alu 132 298 -14 1848 155 0 0 chr20 5764042 5764333 -60903672 - AluSx SINE Alu -21 291 1 432 51 0 0 chr20 5764383 5764442 -60903563 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1735 169 3 0 chr20 5764442 5764726 -60903279 - AluSx SINE Alu -27 285 1 335 195 143 39 chr20 5764744 5764790 -60903215 - AluJo SINE Alu -129 173 133 339 25 0 0 chr20 5764790 5764830 -60903175 + (TG)n Simple_repeat Simple_repeat 2 41 0 335 195 143 39 chr20 5764830 5764860 -60903145 - AluJo SINE Alu -169 133 89 1647 141 72 4 chr20 5764872 5765149 -60902856 - AluJb SINE Alu -16 296 1 2333 71 3 0 chr20 5765397 5765693 -60902312 + AluSp SINE Alu 1 297 -16 2108 103 14 0 chr20 5765779 5766071 -60901934 - AluSg SINE Alu -14 296 1 2367 80 3 0 chr20 5766614 5766926 -60901079 + AluSp SINE Alu 1 313 0 1452 199 7 14 chr20 5767181 5767492 -60900513 + AluSx SINE Alu 1 309 0 1553 205 3 3 chr20 5767493 5767796 -60900209 + AluJb SINE Alu 1 303 -9 1186 188 33 0 chr20 5767799 5768012 -60899993 - LTR8A LTR ERV1 -349 378 159 233 211 0 0 chr20 5768037 5768089 -60899916 + AluJ/monomer SINE Alu 250 301 -1 2170 98 3 13 chr20 5768109 5768424 -60899581 - AluSx SINE Alu 0 312 1 2146 117 3 0 chr20 5768424 5768731 -60899274 - AluSx SINE Alu -3 309 1 1981 129 3 0 chr20 5768781 5769068 -60898937 - AluSx SINE Alu -24 288 1 965 86 0 0 chr20 5769129 5769268 -60898737 - Alu SINE Alu 0 311 173 2270 95 0 3 chr20 5769328 5769632 -60898373 + AluSx SINE Alu 2 304 -8 207 0 0 0 chr20 5770268 5770291 -60897714 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2110 110 7 0 chr20 5770300 5770591 -60897414 - AluSp SINE Alu -20 293 1 182 206 159 48 chr20 5770593 5770656 -60897349 + L2 LINE L2 3171 3240 -32 2466 44 0 0 chr20 5770803 5771101 -60896904 + AluY SINE Alu 1 298 -13 1700 158 0 31 chr20 5771519 5771836 -60896169 + AluJb SINE Alu 6 312 0 953 161 0 6 chr20 5771927 5772088 -60895917 - AluJo SINE Alu -135 177 18 2004 144 0 0 chr20 5772188 5772494 -60895511 + AluSx SINE Alu 1 306 -6 851 199 0 119 chr20 5772595 5772831 -60895174 + AluSx SINE Alu 5 212 -100 1317 121 0 0 chr20 5772913 5773095 -60894910 + AluSg/x SINE Alu 99 280 -32 189 0 0 0 chr20 5773095 5773116 -60894889 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 4528 105 38 31 chr20 5773140 5773302 -60894703 - LTR8 LTR ERV1 0 691 532 2014 109 10 23 chr20 5773302 5773606 -60894399 - AluSx SINE Alu -12 300 1 4528 105 38 31 chr20 5773606 5774129 -60893876 - LTR8 LTR ERV1 -159 532 1 2298 88 0 0 chr20 5774209 5774514 -60893491 + AluSq SINE Alu 1 305 -8 1657 180 30 10 chr20 5774522 5774827 -60893178 + AluJb SINE Alu 1 311 -1 2173 201 89 99 chr20 5775127 5775962 -60892043 + LTR1B LTR ERV1 1 826 0 23 0 0 0 chr20 5776561 5776584 -60891421 + AT_rich Low_complexity Low_complexity 1 23 0 1698 157 10 10 chr20 5776625 5776937 -60891068 - AluSx SINE Alu 0 312 1 1557 173 3 32 chr20 5776987 5777132 -60890873 + AluJo SINE Alu 1 149 -163 1912 118 3 14 chr20 5777132 5777421 -60890584 + AluSx SINE Alu 21 306 -6 1557 173 3 32 chr20 5777421 5777588 -60890417 + AluJo SINE Alu 149 304 -8 402 275 42 35 chr20 5777783 5777848 -60890157 - MIR SINE MIR -28 234 171 2215 84 0 0 chr20 5777848 5778182 -60889823 - AluSx SINE Alu 0 334 1 402 275 42 35 chr20 5778182 5778257 -60889748 - MIR SINE MIR -91 171 92 269 343 95 0 chr20 5778265 5778370 -60889635 + MIR SINE MIR 78 192 -70 396 284 106 21 chr20 5778519 5778660 -60889345 - MER63 DNA MER1_type -275 787 9 1907 115 43 0 chr20 5779019 5779298 -60888707 - AluSx SINE Alu -21 291 1 1156 164 0 36 chr20 5779429 5779648 -60888357 + AluJb SINE Alu 1 211 -101 1025 132 102 0 chr20 5779648 5779815 -60888190 - LTR8 LTR ERV1 0 691 508 730 179 0 0 chr20 5779816 5779933 -60888072 + AluSq/x SINE Alu 3 119 -193 509 132 26 0 chr20 5779941 5780017 -60887988 + AluY SINE Alu 94 171 -140 1438 206 45 94 chr20 5780056 5780358 -60887647 - MLT1C LTR MaLR -61 406 130 1855 114 0 117 chr20 5780358 5780563 -60887442 - AluSx SINE Alu 0 302 151 2081 96 4 0 chr20 5780563 5780843 -60887162 - AluSp SINE Alu -32 281 1 1855 114 0 117 chr20 5780843 5780979 -60887026 - AluSx SINE Alu -151 151 1 1438 206 45 94 chr20 5780979 5781103 -60886902 - MLT1C LTR MaLR -337 130 1 1175 194 116 8 chr20 5781328 5781596 -60886409 - AluSg SINE Alu 0 310 14 2160 105 0 3 chr20 5781767 5782063 -60885942 + AluSg1 SINE Alu 1 295 -14 1391 152 152 37 chr20 5782117 5782386 -60885619 - AluJo SINE Alu 0 302 3 2090 120 0 0 chr20 5782435 5782736 -60885269 + AluSp SINE Alu 1 301 -12 2795 178 61 20 chr20 5783078 5783616 -60884389 - MER21A LTR ERV1 0 931 372 2562 103 15 29 chr20 5783630 5784065 -60883940 + MER41A LTR ERV1 1 470 -165 906 165 11 11 chr20 5784066 5784242 -60883763 + AluSg/x SINE Alu 137 312 0 2139 94 7 0 chr20 5784258 5784545 -60883460 + AluSp SINE Alu 1 289 -24 843 122 157 0 chr20 5784557 5784704 -60883301 + MER41A LTR ERV1 385 554 0 927 161 11 0 chr20 5784796 5784970 -60883035 + AluY SINE Alu 136 311 0 1388 169 4 34 chr20 5785027 5785293 -60882712 + AluJb SINE Alu 36 293 -19 2345 100 91 0 chr20 5785314 5785675 -60882330 - MER39B LTR ERV1 0 653 260 1426 180 6 55 chr20 5785692 5785763 -60882242 - AluSx SINE Alu 0 312 239 2230 100 0 0 chr20 5785763 5786063 -60881942 - AluSc SINE Alu -9 300 1 1426 180 6 55 chr20 5786063 5786319 -60881686 - AluSx SINE Alu -73 239 1 801 149 25 0 chr20 5786331 5786452 -60881553 - FLAM_C SINE Alu -18 125 2 213 376 80 0 chr20 5786498 5786623 -60881382 + L2 LINE L2 1086 1220 -2094 565 203 156 26 chr20 5786673 5786865 -60881140 - MLT1F1 LTR MaLR -8 559 343 273 57 0 0 chr20 5786865 5786900 -60881105 + (TCC)n Simple_repeat Simple_repeat 3 37 0 1471 150 24 55 chr20 5786919 5787212 -60880793 - AluJo SINE Alu -28 284 1 10466 51 9 12 chr20 5787224 5788604 -60879401 - SVA Other Other -9 1377 2 303 327 115 26 chr20 5788651 5788807 -60879198 - MLT1F1 LTR MaLR -214 376 207 2004 129 0 3 chr20 5788957 5789252 -60878753 - AluSx SINE Alu -18 294 1 2039 117 7 0 chr20 5789252 5789550 -60878455 - AluSx SINE Alu -12 300 1 2214 209 93 9 chr20 5789761 5790224 -60877781 - MLT1F LTR MaLR 0 542 41 855 153 0 7 chr20 5790279 5790416 -60877589 + AluJb SINE Alu 1 136 -176 1927 126 34 0 chr20 5790434 5790727 -60877278 + AluSx SINE Alu 1 303 -9 626 260 104 24 chr20 5791396 5791646 -60876359 + L2 LINE L2 1851 2120 -1194 648 210 0 8 chr20 5791656 5791775 -60876230 + AluSq/x SINE Alu 2 119 -193 1969 141 3 0 chr20 5791775 5792080 -60875925 - AluSx SINE Alu -6 306 1 1555 137 133 0 chr20 5792148 5792419 -60875586 - AluSx SINE Alu -5 307 1 885 284 177 28 chr20 5792481 5793038 -60874967 + L2 LINE L2 2144 2860 -453 2109 117 3 0 chr20 5793038 5793345 -60874660 + AluSx SINE Alu 1 308 -4 885 284 177 28 chr20 5793345 5793593 -60874412 + L2 LINE L2 2860 3070 -243 1008 183 0 0 chr20 5793827 5793996 -60874009 + AluJb SINE Alu 121 289 -23 1226 128 0 15 chr20 5794658 5794885 -60873120 - AluSg/x SINE Alu 0 306 83 606 110 12 0 chr20 5794885 5794967 -60873038 - AluSp/q SINE Alu -63 250 168 930 69 0 42 chr20 5794967 5795111 -60872894 + AluSp/q SINE Alu 176 313 0 1540 178 31 0 chr20 5795214 5795501 -60872504 + AluJb SINE Alu 1 296 -16 1980 122 3 0 chr20 5795522 5795816 -60872189 + AluY SINE Alu 1 295 -16 2239 78 3 16 chr20 5796266 5796575 -60871430 + AluSq SINE Alu 1 305 -8 267 273 0 0 chr20 5796831 5796897 -60871108 - MIR3 SINE MIR -18 190 125 1846 162 0 0 chr20 5796901 5797203 -60870802 + AluSx SINE Alu 1 302 -10 2078 122 0 0 chr20 5797214 5797546 -60870459 - AluSg SINE Alu 0 332 1 1356 157 0 8 chr20 5797571 5797807 -60870198 - AluJb SINE Alu -9 303 70 2238 102 0 0 chr20 5797901 5798205 -60869800 - AluSq SINE Alu -9 304 1 2047 85 3 21 chr20 5798241 5798546 -60869459 + AluSg SINE Alu 5 304 0 191 172 35 0 chr20 5798576 5798591 -60869414 + GA-rich Low_complexity Low_complexity 1 14 -46 1540 164 64 20 chr20 5798591 5798889 -60869116 + AluJb SINE Alu 1 311 -1 191 172 35 0 chr20 5798889 5798931 -60869074 + GA-rich Low_complexity Low_complexity 14 60 0 1736 106 75 0 chr20 5799334 5799589 -60868416 - AluSg SINE Alu -28 282 9 2138 102 0 0 chr20 5799602 5799919 -60868086 - AluSx SINE Alu 0 317 1 213 222 0 19 chr20 5799986 5800040 -60867965 - MIR SINE MIR -56 152 100 3989 93 15 99 chr20 5800175 5800860 -60867145 + MER4A LTR ERV1 1 627 -37 2032 138 0 0 chr20 5800860 5801158 -60866847 - AluSx SINE Alu -14 298 1 2086 130 3 0 chr20 5801503 5801811 -60866194 + AluSx SINE Alu 1 309 -3 2075 109 0 7 chr20 5802180 5802473 -60865532 - AluSx SINE Alu -19 293 3 2269 64 3 10 chr20 5802668 5802966 -60865039 - AluY SINE Alu -15 296 1 243 0 0 0 chr20 5803148 5803175 -60864830 + (TG)n Simple_repeat Simple_repeat 2 28 0 338 200 71 0 chr20 5803358 5803428 -60864577 + MIR SINE MIR 136 210 -52 2162 102 3 0 chr20 5803548 5803841 -60864164 - AluSc SINE Alu -15 294 1 1390 160 8 23 chr20 5803871 5804127 -60863878 + AluJo SINE Alu 35 286 -26 1904 114 25 89 chr20 5804341 5804656 -60863349 + AluJb SINE Alu 1 295 -17 337 241 190 26 chr20 5804661 5804777 -60863228 - MIR SINE MIR -10 252 118 256 235 111 12 chr20 5804779 5804860 -60863145 - MLT1K LTR MaLR -48 540 452 2501 44 7 3 chr20 5805036 5805333 -60862672 - AluY SINE Alu -9 302 5 809 275 95 64 chr20 5805533 5805955 -60862050 - LTR16A LTR ERVL 0 450 16 1883 160 0 0 chr20 5806610 5806742 -60861263 + AluJo SINE Alu 1 132 -180 1798 129 39 25 chr20 5806742 5807022 -60860983 + AluSx SINE Alu 15 298 -14 1883 160 0 0 chr20 5807022 5807176 -60860829 + AluJo SINE Alu 131 287 -25 631 248 0 35 chr20 5807241 5807382 -60860623 + AluJo SINE Alu 2 137 -175 527 148 0 87 chr20 5807378 5807493 -60860512 + FLAM_C SINE Alu 39 143 0 * 250 105 0 0 chr20 5808442 5808480 -60859525 - AluSp/q SINE Alu -43 260 223 255 184 0 0 chr20 5808510 5808559 -60859446 + L1MC5 LINE L1 7843 7891 -70 2418 97 3 0 chr20 5808591 5808901 -60859104 + AluSx SINE Alu 1 311 -1 258 298 103 101 chr20 5808904 5809278 -60858727 - L2 LINE L2 -198 3074 2691 2066 127 20 0 chr20 5809329 5809621 -60858384 + AluSx SINE Alu 1 298 -14 2583 130 30 39 chr20 5809629 5810091 -60857914 + L1PB4 LINE L1 5581 6038 -118 1944 150 0 14 chr20 5810093 5810379 -60857626 + AluJo SINE Alu 1 282 -30 2400 75 24 0 chr20 5810381 5810674 -60857331 - AluY SINE Alu -11 300 1 985 193 0 16 chr20 5810734 5810746 -60857259 + AluJo SINE Alu 120 131 -181 763 152 8 0 chr20 5810746 5810871 -60857134 + L1PB4 LINE L1 6031 6156 0 2341 91 10 0 chr20 5810874 5811170 -60856835 + AluSg SINE Alu 1 299 -11 985 193 0 16 chr20 5811170 5811340 -60856665 + AluJo SINE Alu 133 303 -9 1030 233 24 51 chr20 5811433 5811725 -60856280 + MLT1B LTR MaLR 107 390 0 1051 133 0 0 chr20 5812214 5812364 -60855641 + AluSp/q SINE Alu 157 306 -7 1284 163 124 35 chr20 5812506 5812618 -60855387 + AluSq SINE Alu 1 102 -211 279 0 0 0 chr20 5812618 5812649 -60855356 + (TC)n Simple_repeat Simple_repeat 2 32 0 1284 163 124 35 chr20 5812649 5812818 -60855187 + AluSq SINE Alu 102 307 -6 810 184 5 81 chr20 5812822 5813007 -60854998 + FRAM SINE Alu 1 171 -5 2194 125 0 19 chr20 5813233 5813546 -60854459 - AluSx SINE Alu -3 309 3 1866 175 0 20 chr20 5813550 5813853 -60854152 - AluJb SINE Alu -15 297 1 2253 79 0 4 chr20 5814444 5814721 -60853284 + AluSc SINE Alu 1 276 -33 2494 57 0 7 chr20 5815197 5815496 -60852509 - AluY SINE Alu -14 297 1 273 222 11 67 chr20 5815853 5815943 -60852062 - MLT1H LTR MaLR -60 489 405 719 250 10 47 chr20 5815946 5816138 -60851867 + MLT1E2 LTR MaLR 2 186 -440 538 181 0 0 chr20 5816142 5816225 -60851780 + FLAM_C SINE Alu 36 118 -25 882 211 64 18 chr20 5816226 5816444 -60851561 + MLT1E2 LTR MaLR 232 459 -167 1484 180 87 0 chr20 5816446 5816847 -60851158 - L1M3 LINE L1 -736 5447 5025 241 321 28 0 chr20 5816930 5817039 -60850966 + MLT1H LTR MaLR 33 144 -405 816 291 44 7 chr20 5817056 5817331 -60850674 + MLT1H LTR MaLR 119 403 -146 1078 234 103 0 chr20 5817442 5817724 -60850281 - L2 LINE L2 -661 2653 2343 587 178 0 54 chr20 5818378 5818507 -60849498 + AluSg/x SINE Alu 181 302 -7 2622 58 0 3 chr20 5819122 5819431 -60848574 + AluY SINE Alu 2 309 -2 180 0 0 0 chr20 5819771 5819791 -60848214 + (TGG)n Simple_repeat Simple_repeat 1 20 0 2121 119 14 0 chr20 5819791 5820076 -60847929 - AluSx SINE Alu -23 289 1 2528 61 0 3 chr20 5820179 5820476 -60847529 - AluY SINE Alu -15 296 1 2229 103 3 7 chr20 5820512 5820829 -60847176 + AluSp SINE Alu 1 313 0 1741 150 58 69 chr20 5820836 5821215 -60846790 - THE1C LTR MaLR 0 375 1 2290 64 0 3 chr20 5821222 5821633 -60846372 - AluY SINE Alu 0 410 1 358 227 47 16 chr20 5821684 5821812 -60846193 + L1ME4a LINE L1 5969 6100 -21 1771 176 17 10 chr20 5822029 5822331 -60845674 - AluJo SINE Alu -8 304 1 204 273 0 0 chr20 5822351 5822395 -60845610 + (TA)n Simple_repeat Simple_repeat 1 44 0 449 304 47 77 chr20 5822404 5822977 -60845028 + L1MC4a LINE L1 5293 5848 -1960 625 289 0 60 chr20 5823017 5823185 -60844820 + MIR SINE MIR 44 198 -64 1929 166 3 13 chr20 5823185 5823492 -60844513 - AluJb SINE Alu -8 304 1 625 289 0 60 chr20 5823492 5823541 -60844464 + MIR SINE MIR 198 248 -14 303 315 63 35 chr20 5823556 5823699 -60844306 + L1ME4a LINE L1 5869 6015 -106 276 149 0 0 chr20 5823825 5823872 -60844133 + (CA)n Simple_repeat Simple_repeat 1 47 0 1333 187 26 37 chr20 5824265 5824533 -60843472 - AluJo SINE Alu -47 265 1 22 0 0 0 chr20 5824698 5824720 -60843285 + AT_rich Low_complexity Low_complexity 1 22 0 2214 127 0 13 chr20 5824720 5825036 -60842969 + AluSx SINE Alu 1 312 0 27 29 0 0 chr20 5825121 5825155 -60842850 + AT_rich Low_complexity Low_complexity 1 34 0 2186 119 0 0 chr20 5825157 5825450 -60842555 + AluSx SINE Alu 1 293 -19 853 144 0 43 chr20 5825605 5825744 -60842261 - FLAM_C SINE Alu 0 133 1 652 274 82 32 chr20 5825784 5826216 -60841789 - LTR33 LTR ERVL 0 521 29 2214 123 3 0 chr20 5826305 5826605 -60841400 - AluSq SINE Alu -12 301 1 439 258 33 38 chr20 5826723 5826749 -60841256 - L1M3 LINE L1 -530 5653 5628 2076 145 0 25 chr20 5826749 5827067 -60840938 + AluSx SINE Alu 1 310 -2 439 258 33 38 chr20 5827067 5827289 -60840716 - L1M3 LINE L1 -555 5628 5412 2159 152 16 45 chr20 5827950 5828170 -60839835 - MLT1A1 LTR MaLR 0 365 159 2558 85 0 0 chr20 5828170 5828477 -60839528 - AluSp SINE Alu -6 307 1 2159 152 16 45 chr20 5828477 5828632 -60839373 - MLT1A1 LTR MaLR -206 159 1 2362 102 0 16 chr20 5829183 5829498 -60838507 - AluSx SINE Alu -2 310 1 2116 136 0 10 chr20 5829498 5829806 -60838199 - AluSx SINE Alu -7 305 1 23 0 0 0 chr20 5829815 5829838 -60838167 + AT_rich Low_complexity Low_complexity 1 23 0 1916 148 44 7 chr20 5830096 5830394 -60837611 - AluJb SINE Alu 0 312 4 216 362 109 7 chr20 5830470 5830608 -60837397 - L2 LINE L2 -5 3267 3116 612 306 39 55 chr20 5830742 5831072 -60836933 - MLT1H LTR MaLR -195 354 30 339 136 0 0 chr20 5831204 5831263 -60836742 + (TCCC)n Simple_repeat Simple_repeat 1 59 0 1620 117 19 127 chr20 5831264 5831438 -60836567 - AluJo SINE Alu -23 289 164 1698 184 31 3 chr20 5831438 5831726 -60836279 + AluJb SINE Alu 3 298 -14 1620 117 19 127 chr20 5831726 5831875 -60836130 - AluJo SINE Alu -148 164 1 2201 122 0 3 chr20 5832069 5832373 -60835632 + AluSx SINE Alu 1 303 -9 2237 39 0 12 chr20 5832503 5832761 -60835244 - AluY SINE Alu -16 295 41 836 142 8 30 chr20 5833040 5833174 -60834831 - FLAM_C SINE Alu -2 131 1 414 57 0 0 chr20 5833277 5833330 -60834675 + (TATG)n Simple_repeat Simple_repeat 2 54 0 602 266 16 99 chr20 5833390 5833552 -60834453 - MLT1I LTR MaLR -98 311 184 1995 131 6 35 chr20 5833552 5833864 -60834141 + AluSx SINE Alu 1 303 -9 602 266 16 99 chr20 5833864 5834005 -60834000 - MLT1I LTR MaLR -225 184 33 564 243 79 79 chr20 5834196 5834355 -60833650 + MIR SINE MIR 44 202 -60 858 139 106 101 chr20 5834355 5834471 -60833534 + MER3 DNA MER1_type 1 120 -89 2015 94 0 8 chr20 5834471 5834738 -60833267 - AluSx SINE Alu -45 267 3 858 139 106 101 chr20 5834738 5834829 -60833176 + MER3 DNA MER1_type 120 209 0 564 243 79 79 chr20 5834829 5834841 -60833164 + MIR SINE MIR 202 213 -49 1710 202 10 0 chr20 5834841 5835138 -60832867 + AluJb SINE Alu 1 300 -12 564 243 79 79 chr20 5835138 5835179 -60832826 + MIR SINE MIR 212 257 -5 1513 184 112 90 chr20 5835603 5835880 -60832125 - MLT1C LTR MaLR 0 467 175 2317 111 0 10 chr20 5835880 5836187 -60831818 - AluJb SINE Alu -8 304 1 1513 184 112 90 chr20 5836187 5836366 -60831639 - MLT1C LTR MaLR -292 175 1 276 125 42 0 chr20 5836676 5836724 -60831281 + MLT1K LTR MaLR 539 588 0 661 245 43 69 chr20 5837017 5837426 -60830579 + LTR16C LTR ERVL 100 456 -1 371 217 43 52 chr20 5837661 5837729 -60830276 - L1ME4a LINE L1 0 6121 6053 2140 123 7 3 chr20 5837729 5838029 -60829976 + AluSx SINE Alu 1 301 -11 371 217 43 52 chr20 5838029 5838075 -60829930 - L1ME4a LINE L1 -68 6053 6008 1759 141 13 46 chr20 5838675 5838979 -60829026 + AluJb SINE Alu 1 294 -18 1770 213 76 41 chr20 5838979 5839468 -60828537 + MLT1E2 LTR MaLR 114 619 -7 1136 282 55 40 chr20 5839607 5839740 -60828265 - LTR16C LTR ERVL -8 483 353 2201 101 7 7 chr20 5839740 5840036 -60827969 + AluSq SINE Alu 7 302 -11 2016 140 0 23 chr20 5840044 5840352 -60827653 + AluJb SINE Alu 1 301 -11 1136 282 55 40 chr20 5840352 5840680 -60827325 - LTR16C LTR ERVL -144 347 6 581 288 66 26 chr20 5840783 5840949 -60827056 + MIR SINE MIR 13 193 -69 2166 108 0 11 chr20 5840949 5841293 -60826712 - AluSx SINE Alu 0 341 1 581 288 66 26 chr20 5841293 5841351 -60826654 + MIR SINE MIR 193 247 -15 1538 154 32 43 chr20 5841537 5841817 -60826188 + AluJo SINE Alu 15 291 -21 1393 93 6 0 chr20 5841852 5842024 -60825981 + AluSp SINE Alu 85 257 -56 863 228 52 40 chr20 5842125 5842397 -60825608 + Charlie4 DNA MER1_type 18 292 -1669 1863 131 0 72 chr20 5842403 5842735 -60825270 - AluSx SINE Alu 0 310 1 2016 203 43 51 chr20 5843028 5843535 -60824470 - MLT1D LTR MaLR -2 503 1 350 171 0 13 chr20 5843950 5844026 -60823979 + CT-rich Low_complexity Low_complexity 4 78 0 2046 126 4 0 chr20 5844026 5844304 -60823701 - AluSx SINE Alu -33 279 1 418 290 0 0 chr20 5844388 5844512 -60823493 + LTR16C LTR ERVL 357 480 -11 2199 139 0 0 chr20 5845064 5845366 -60822639 + AluSx SINE Alu 1 302 -10 2280 106 0 10 chr20 5845761 5846064 -60821941 + AluSq SINE Alu 1 300 -13 2440 101 0 0 chr20 5846274 5846581 -60821424 + AluSc SINE Alu 3 309 0 1471 226 36 7 chr20 5846696 5846997 -60821008 - AluJb SINE Alu -2 310 1 210 143 0 0 chr20 5847000 5847035 -60820970 + (T)n Simple_repeat Simple_repeat 1 35 0 549 258 168 0 chr20 5847155 5847322 -60820683 - MIR SINE MIR 0 262 68 1940 145 3 11 chr20 5847521 5847804 -60820201 + AluJb SINE Alu 11 291 -21 333 68 0 0 chr20 5847831 5847875 -60820130 + (TTTC)n Simple_repeat Simple_repeat 1 44 0 2127 152 0 3 chr20 5847878 5848188 -60819817 - AluSx SINE Alu -3 309 1 2034 137 3 3 chr20 5848353 5848646 -60819359 - AluJb SINE Alu -19 293 1 2345 105 0 0 chr20 5848661 5848955 -60819050 + AluSg SINE Alu 1 294 -16 1606 109 18 4 chr20 5849259 5849488 -60818517 - AluSg/x SINE Alu -2 310 79 11946 28 3 25 chr20 5849875 5851282 -60816723 + SVA Other Other 5 1380 -6 975 167 194 53 chr20 5851369 5851468 -60816537 + AluSg SINE Alu 1 85 -215 2199 110 3 0 chr20 5851468 5851760 -60816245 - AluSp SINE Alu -4 309 17 975 167 194 53 chr20 5851760 5851923 -60816082 + AluSg SINE Alu 85 300 0 1754 187 10 7 chr20 5852796 5853101 -60814904 - AluJo SINE Alu -6 306 1 2393 147 121 28 chr20 5853180 5853248 -60814757 - MLT1D LTR MaLR 0 505 445 2157 108 3 11 chr20 5853248 5853526 -60814479 + AluSc SINE Alu 1 278 -31 327 25 0 0 chr20 5853526 5853566 -60814439 + (CA)n Simple_repeat Simple_repeat 1 40 0 2393 147 121 28 chr20 5853574 5853967 -60814038 - MLT1D LTR MaLR -60 445 1 2039 147 19 3 chr20 5853991 5854298 -60813707 + AluJb SINE Alu 1 312 0 706 296 71 24 chr20 5854422 5854675 -60813330 + LTR16C LTR ERVL 42 306 -185 918 122 0 8 chr20 5854676 5854807 -60813198 + FLAM_C SINE Alu 1 130 -13 688 246 6 34 chr20 5854838 5855017 -60812988 + LTR16C LTR ERVL 313 486 -5 329 285 50 13 chr20 5855023 5855132 -60812873 - MIR SINE MIR -102 106 8 2385 96 0 3 chr20 5855735 5856047 -60811958 - AluSq SINE Alu -2 311 1 1482 134 22 109 chr20 5856156 5856477 -60811528 - AluJb SINE Alu -11 301 9 604 163 0 0 chr20 5856482 5856574 -60811431 - AluJo SINE Alu -20 292 201 * 789 146 7 35 chr20 5856570 5856714 -60811291 - AluJo SINE Alu -170 142 3 1754 158 0 26 chr20 5857374 5857677 -60810328 - AluJo SINE Alu -13 299 5 2099 110 3 0 chr20 5857696 5857995 -60810010 - AluSx SINE Alu -10 302 3 1451 189 0 25 chr20 5858506 5858836 -60809169 + AluJo SINE Alu 9 331 0 691 182 0 0 chr20 5858850 5858960 -60809045 + FLAM_C SINE Alu 2 111 -32 453 19 0 0 chr20 5858967 5859021 -60808984 + (TAA)n Simple_repeat Simple_repeat 1 54 0 845 111 0 32 chr20 5860004 5860130 -60807875 + FLAM_C SINE Alu 2 123 -10 800 76 0 0 chr20 5860134 5860239 -60807766 + AluY SINE Alu 194 298 -13 2176 95 0 0 chr20 5860245 5860530 -60807475 + AluSg SINE Alu 1 285 -25 288 77 0 0 chr20 5860530 5860569 -60807436 + (CATA)n Simple_repeat Simple_repeat 2 40 0 1857 160 0 0 chr20 5860685 5860985 -60807020 - AluSx SINE Alu -12 300 1 643 291 62 55 chr20 5861013 5861736 -60806269 - L1MEd LINE L1 -4579 1731 971 934 219 109 29 chr20 5861736 5862010 -60805995 + MLT1A2 LTR MaLR 1 296 -78 1565 164 20 40 chr20 5862070 5862374 -60805631 + AluSx SINE Alu 1 298 -14 1730 165 13 3 chr20 5862422 5862772 -60805233 - AluJb SINE Alu 0 353 1 318 285 173 10 chr20 5863504 5863763 -60804242 + L1MC/D LINE L1 5425 5737 -586 988 205 20 94 chr20 5863930 5864228 -60803777 - MLT1A2 LTR MaLR 0 374 99 2036 102 93 130 chr20 5864231 5864693 -60803312 - Tigger2 DNA MER2_type -3 2715 2271 396 194 0 0 chr20 5864677 5864749 -60803256 - Tigger2 DNA MER2_type -2646 72 1 * 234 227 0 113 chr20 5864757 5864854 -60803151 - MLT1A2 LTR MaLR -278 87 2 590 268 121 17 chr20 5864858 5865089 -60802916 + LTR16C LTR ERVL 223 477 -14 1942 164 22 43 chr20 5865146 5865291 -60802714 + MLT1A1 LTR MaLR 1 148 -217 1790 154 3 13 chr20 5865291 5865597 -60802408 - AluJb SINE Alu -9 303 1 1942 164 22 43 chr20 5865597 5865822 -60802183 + MLT1A1 LTR MaLR 148 363 -2 2481 65 0 0 chr20 5866230 5866536 -60801469 - AluY SINE Alu -5 306 1 1660 171 30 3 chr20 5866555 5866854 -60801151 - AluSx SINE Alu -5 307 1 234 239 60 0 chr20 5866856 5866923 -60801082 - L1ME LINE L1 -266 5904 5834 1479 130 41 30 chr20 5867052 5867321 -60800684 - AluJb SINE Alu -39 273 2 361 61 0 0 chr20 5867321 5867370 -60800635 + AluSp/q SINE Alu 248 296 -7 226 169 56 84 chr20 5867597 5867668 -60800337 - MER61B LTR ERV1 -272 153 85 1350 285 80 8 chr20 5868024 5868497 -60799508 - LTR33 LTR ERVL -14 507 1 382 127 0 0 chr20 5868761 5868816 -60799189 - MER20 DNA MER1_type -2 217 163 536 272 56 52 chr20 5868871 5869084 -60798921 - MLT1H LTR MaLR -262 287 74 2162 106 3 0 chr20 5869742 5870045 -60797960 + AluSc SINE Alu 1 304 -5 944 132 38 128 chr20 5870046 5870281 -60797724 - AluJb SINE Alu -23 289 76 1895 109 26 22 chr20 5870290 5870601 -60797404 + AluSx SINE Alu 1 312 0 323 195 0 98 chr20 5870628 5870710 -60797295 - AluJb SINE Alu -223 79 6 934 200 41 15 chr20 5870737 5870932 -60797073 + MIR SINE MIR 12 211 -51 1726 154 0 17 chr20 5870932 5871224 -60796781 + AluJb SINE Alu 1 287 -25 2102 117 0 0 chr20 5871299 5871598 -60796407 - AluSx SINE Alu -13 299 1 29 59 0 15 chr20 5872041 5872079 -60795926 + AT_rich Low_complexity Low_complexity 1 39 -28 2309 84 0 3 chr20 5872079 5872387 -60795618 + AluSg1 SINE Alu 1 307 -2 29 59 0 15 chr20 5872387 5872416 -60795589 + AT_rich Low_complexity Low_complexity 39 67 0 1792 144 7 7 chr20 5872495 5872786 -60795219 + AluJb SINE Alu 13 303 -9 2215 113 0 0 chr20 5872869 5873171 -60794834 - AluSg SINE Alu -8 302 1 2183 127 0 0 chr20 5873830 5874138 -60793867 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr20 5874221 5874243 -60793762 + AT_rich Low_complexity Low_complexity 1 22 0 1786 162 7 7 chr20 5874255 5874563 -60793442 + AluJb SINE Alu 1 308 -4 670 213 24 0 chr20 5874582 5874709 -60793296 + FLAM_A SINE Alu 1 130 -3 2214 97 0 7 chr20 5874709 5875009 -60792996 - AluSq SINE Alu -15 298 1 2276 87 0 22 chr20 5875113 5875424 -60792581 + AluSc SINE Alu 1 304 -5 1519 245 113 48 chr20 5875459 5876018 -60791987 - MLT1G1 LTR MaLR 0 595 1 1345 186 21 0 chr20 5876761 5876998 -60791007 + MLT1D LTR MaLR 1 242 -263 223 164 33 0 chr20 5877009 5877070 -60790935 + GA-rich Low_complexity Low_complexity 2 64 0 21 36 0 0 chr20 5877138 5877166 -60790839 + AT_rich Low_complexity Low_complexity 1 28 0 1861 74 82 0 chr20 5877167 5877423 -60790582 - AluSp SINE Alu -14 299 23 396 109 0 0 chr20 5877423 5877478 -60790527 - Alu SINE Alu -246 56 2 1760 143 20 3 chr20 5877478 5877771 -60790234 - AluJo SINE Alu -14 298 1 513 135 128 11 chr20 5877771 5877922 -60790083 + MLT1D LTR MaLR 295 542 0 1833 138 7 10 chr20 5878278 5878568 -60789437 - AluJb SINE Alu -22 290 2 1350 170 9 88 chr20 5878581 5878899 -60789106 - AluJb SINE Alu -19 293 1 231 226 32 0 chr20 5879109 5879171 -60788834 + LTR33 LTR ERVL 9 72 -449 347 162 59 0 chr20 5879250 5879318 -60788687 + LTR16C LTR ERVL 420 491 0 1952 119 13 44 chr20 5879438 5879756 -60788249 - AluSx SINE Alu -4 308 1 192 111 0 0 chr20 5879917 5879953 -60788052 + (CAGA)n Simple_repeat Simple_repeat 2 37 0 259 294 261 0 chr20 5881329 5881448 -60786557 - L2 LINE L2 0 3313 3164 1363 132 38 9 chr20 5881459 5881672 -60786333 + MER20 DNA MER1_type 1 219 0 1167 186 0 0 chr20 5881680 5881868 -60786137 + MER5A DNA MER1_type 1 188 -1 329 223 48 117 chr20 5881953 5882005 -60786000 + MER5A DNA MER1_type 25 68 -121 2378 77 0 0 chr20 5882005 5882316 -60785689 + AluY SINE Alu 1 311 0 329 223 48 117 chr20 5882316 5882366 -60785639 + MER5A DNA MER1_type 68 120 -69 2123 118 7 0 chr20 5882427 5882733 -60785272 + AluSx SINE Alu 1 308 -4 1187 258 142 42 chr20 5883131 5883588 -60784417 + MLT1J LTR MaLR 1 503 -8 2095 125 0 0 chr20 5884016 5884312 -60783693 + AluSx SINE Alu 1 296 -16 390 42 0 0 chr20 5884313 5884361 -60783644 + (CA)n Simple_repeat Simple_repeat 1 48 0 374 204 11 0 chr20 5884560 5884648 -60783357 + GA-rich Low_complexity Low_complexity 3 91 0 2081 133 0 0 chr20 5885136 5885437 -60782568 + AluSx SINE Alu 1 301 -11 1252 152 61 98 chr20 5885447 5885743 -60782262 + AluJb SINE Alu 6 290 -22 511 128 13 0 chr20 5886190 5886268 -60781737 + AluS SINE Alu 221 299 -13 1962 122 7 7 chr20 5887000 5887296 -60780709 - AluSx SINE Alu -16 296 1 2073 121 0 16 chr20 5887614 5887927 -60780078 - AluSx SINE Alu -4 308 1 2223 90 0 0 chr20 5888460 5888760 -60779245 - AluY SINE Alu -11 300 1 405 226 65 40 chr20 5888793 5888917 -60779088 + MIR SINE MIR 61 187 -75 218 275 92 37 chr20 5888924 5889033 -60778972 + MIR SINE MIR 148 262 0 1640 161 18 0 chr20 5889109 5889382 -60778623 + AluJb SINE Alu 1 278 -34 189 0 0 0 chr20 5889386 5889407 -60778598 + (CAA)n Simple_repeat Simple_repeat 1 21 0 1790 138 7 26 chr20 5889409 5889714 -60778291 + AluSx SINE Alu 1 299 -13 1502 180 24 24 chr20 5890125 5890419 -60777586 + AluJo SINE Alu 1 294 -18 5404 142 25 45 chr20 5890523 5890854 -60777151 - L1MA8 LINE L1 -4 6287 5951 2122 125 0 0 chr20 5890854 5891158 -60776847 - AluSx SINE Alu -8 304 1 5404 142 25 45 chr20 5891158 5891394 -60776611 - L1MA8 LINE L1 -340 5951 5712 2100 135 0 0 chr20 5891394 5891705 -60776300 - AluSx SINE Alu -1 311 1 5404 142 25 45 chr20 5891705 5891962 -60776043 - L1MA8 LINE L1 -579 5712 5452 2210 98 0 13 chr20 5891962 5892277 -60775728 - AluSq SINE Alu -2 311 1 5404 142 25 45 chr20 5892277 5892677 -60775328 - L1MA8 LINE L1 -839 5452 5080 1843 137 10 3 chr20 5892679 5892978 -60775027 + AluSx SINE Alu 1 301 -11 2281 88 0 3 chr20 5893023 5893328 -60774677 + AluSg SINE Alu 1 304 -6 2286 100 0 0 chr20 5893431 5893740 -60774265 - AluSc SINE Alu 0 309 1 2325 100 0 0 chr20 5893743 5894053 -60773952 - AluSx SINE Alu 0 312 3 1098 182 0 0 chr20 5894056 5894254 -60773751 + AluJb SINE Alu 106 303 -9 3638 138 60 31 chr20 5894740 5895030 -60772975 + LTR8 LTR ERV1 1 281 -410 1549 125 0 0 chr20 5895030 5895254 -60772751 + AluSx SINE Alu 54 277 -35 192 40 0 0 chr20 5895254 5895279 -60772726 + (CAA)n Simple_repeat Simple_repeat 3 27 0 3638 138 60 31 chr20 5895279 5895659 -60772346 + LTR8 LTR ERV1 280 691 0 438 316 92 57 chr20 5895947 5896317 -60771688 - L2 LINE L2 0 3272 2890 2162 98 3 0 chr20 5896318 5896640 -60771365 + AluSx SINE Alu 3 312 0 1423 156 240 73 chr20 5896781 5897018 -60770987 + LTR54 LTR ERV1 1 197 -313 1727 144 45 0 chr20 5897018 5897309 -60770696 + AluSx SINE Alu 1 304 -8 1423 156 240 73 chr20 5897309 5897508 -60770497 + LTR54 LTR ERV1 197 510 0 22 0 0 0 chr20 5897634 5897656 -60770349 + AT_rich Low_complexity Low_complexity 1 22 0 2521 33 0 0 chr20 5897666 5897965 -60770040 + AluY SINE Alu 1 299 -12 670 191 0 23 chr20 5897965 5898088 -60769917 - FLAM_C SINE Alu -186 126 5 2174 84 14 0 chr20 5898104 5898401 -60769604 - AluSp SINE Alu -10 303 3 1571 145 27 37 chr20 5898406 5898702 -60769303 - AluJb SINE Alu -19 293 1 847 178 0 6 chr20 5899398 5899561 -60768444 + FRAM SINE Alu 1 162 -14 843 236 52 40 chr20 5899568 5899818 -60768187 - L1MB7 LINE L1 -68 6116 5864 1911 122 0 30 chr20 5899849 5900152 -60767853 - AluSg SINE Alu -16 294 1 2398 171 26 99 chr20 5900209 5900661 -60767344 - MER4D LTR ERV1 0 903 510 2036 145 0 0 chr20 5900661 5900971 -60767034 + AluSx SINE Alu 1 310 -2 2398 171 26 99 chr20 5900971 5901163 -60766842 - MER4D LTR ERV1 -393 510 306 1052 150 6 6 chr20 5901163 5901330 -60766675 - AluSg/x SINE Alu -12 300 134 2074 120 0 13 chr20 5901330 5901646 -60766359 - AluSx SINE Alu 0 312 1 493 132 53 63 chr20 5901650 5901846 -60766159 - MER4D LTR ERV1 -566 347 70 725 139 0 41 chr20 5901871 5901953 -60766052 - FLAM_C SINE Alu -194 118 41 2248 202 48 60 chr20 5901953 5902572 -60765433 + LTR9 LTR ERV1 1 612 0 725 139 0 41 chr20 5902572 5902611 -60765394 - FLAM_C SINE Alu -271 41 2 809 118 14 69 chr20 5902614 5902664 -60765341 - MER4D LTR ERV1 -664 239 188 1996 133 0 0 chr20 5902664 5902958 -60765047 - AluJb SINE Alu -18 294 1 809 118 14 69 chr20 5902958 5903051 -60764954 - MER4D LTR ERV1 -715 188 104 1269 128 63 48 chr20 5903051 5903321 -60764684 - MER4D LTR ERV1 0 903 534 2399 84 0 0 chr20 5903321 5903632 -60764373 + AluSx SINE Alu 1 311 -1 1269 128 63 48 chr20 5903632 5903772 -60764233 - MER4D LTR ERV1 -369 534 398 1936 146 3 1 chr20 5903772 5904080 -60763925 + MER1B DNA MER1_type 1 339 0 2191 110 3 0 chr20 5904096 5904405 -60763600 - AluSp SINE Alu -2 311 2 2063 130 19 6 chr20 5904405 5904727 -60763278 - MER4D LTR ERV1 -505 398 73 807 132 0 8 chr20 5904727 5904848 -60763157 + FLAM_C SINE Alu 12 131 -12 1109 204 71 19 chr20 5904896 5905219 -60762786 - L1M4 LINE L1 -1573 4573 4234 793 182 149 0 chr20 5905226 5905380 -60762625 - AluSp SINE Alu 0 313 137 1270 209 107 133 chr20 5905381 5905608 -60762397 - L1M4 LINE L1 -1903 4243 4012 1748 153 36 23 chr20 5905608 5905916 -60762089 - AluSx SINE Alu 0 312 1 1270 209 107 133 chr20 5905916 5906147 -60761858 - L1M4 LINE L1 -2134 4012 3805 2356 106 0 0 chr20 5906147 5906450 -60761555 - AluSq SINE Alu -10 303 1 1270 209 107 133 chr20 5906450 5906661 -60761344 - L1M4 LINE L1 -2341 3805 3590 491 143 22 0 chr20 5906846 5906937 -60761068 + GA-rich Low_complexity Low_complexity 5 97 0 2220 125 0 7 chr20 5906961 5907266 -60760739 - AluSg SINE Alu -7 303 1 2236 103 3 3 chr20 5907499 5907800 -60760205 - AluSg SINE Alu -9 301 1 1817 139 15 4 chr20 5907819 5908086 -60759919 - AluSx SINE Alu -20 292 23 1763 170 0 24 chr20 5908094 5908388 -60759617 - AluJb SINE Alu -25 287 1 483 185 65 146 chr20 5908391 5908651 -60759354 - L1MC4 LINE L1 0 8042 7804 2271 114 0 0 chr20 5908958 5909256 -60758749 + AluSx SINE Alu 1 298 -14 2902 65 3 0 chr20 5909616 5909983 -60758022 + L1PA8 LINE L1 5805 6172 0 2394 97 0 0 chr20 5910155 5910455 -60757550 - AluSx SINE Alu -12 300 1 2136 101 29 0 chr20 5910527 5910805 -60757200 + AluSx SINE Alu 11 296 -16 2298 104 3 3 chr20 5911240 5911539 -60756466 + AluSc SINE Alu 1 299 -10 2291 72 58 0 chr20 5911572 5911863 -60756142 + AluSp SINE Alu 1 308 -5 190 208 0 75 chr20 5911868 5911890 -60756115 - MIR SINE MIR -92 170 148 3007 121 26 2 chr20 5911890 5912344 -60755661 + MER4C LTR ERV1 1 465 0 190 208 0 75 chr20 5912344 5912374 -60755631 - MIR SINE MIR -114 148 122 2197 102 0 57 chr20 5912374 5912688 -60755317 + AluSx SINE Alu 1 296 -16 328 257 76 9 chr20 5912698 5912803 -60755202 + L1MC4 LINE L1 6610 6721 -1321 328 232 24 12 chr20 5912804 5912886 -60755119 - MIR SINE MIR -146 116 34 1454 196 0 33 chr20 5912955 5913231 -60754774 + AluJo SINE Alu 1 267 -45 892 125 0 15 chr20 5913612 5913748 -60754257 - FLAM_C SINE Alu -3 140 7 2256 104 0 25 chr20 5913778 5914095 -60753910 - AluSg SINE Alu -1 309 1 891 134 0 8 chr20 5914332 5914466 -60753539 - AluSq/x SINE Alu -180 133 1 505 211 145 30 chr20 5915037 5915253 -60752752 + MIR SINE MIR 11 250 -12 773 181 0 0 chr20 5915319 5915452 -60752553 - FLAM_C SINE Alu 0 133 1 1625 157 18 28 chr20 5915670 5915985 -60752020 - AluJo SINE Alu 0 312 1 2193 119 3 3 chr20 5916520 5916822 -60751183 - AluSx SINE Alu -10 302 1 210 288 180 7 chr20 5916961 5917100 -60750905 + L2 LINE L2 3073 3235 -37 407 150 0 0 chr20 5917355 5917415 -60750590 - tRNA-Gly-GGA tRNA tRNA -1 74 15 1859 166 7 7 chr20 5917452 5917754 -60750251 - AluJo SINE Alu -10 302 1 14578 120 36 60 chr20 5917970 5918269 -60749736 - Tigger7 DNA MER2_type 0 2487 2182 2503 88 0 0 chr20 5918269 5918574 -60749431 + AluSq SINE Alu 1 305 -8 14578 120 36 60 chr20 5918574 5920411 -60747594 - Tigger7 DNA MER2_type -305 2182 419 2355 106 0 3 chr20 5920411 5920723 -60747282 - AluSq SINE Alu -2 311 1 14578 120 36 60 chr20 5920723 5921133 -60746872 - Tigger7 DNA MER2_type -2068 419 1 959 137 0 0 chr20 5921181 5921320 -60746685 + FLAM_C SINE Alu 5 143 0 195 42 0 0 chr20 5922182 5922206 -60745799 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 420 316 71 15 chr20 5922246 5922442 -60745563 + MIR SINE MIR 47 253 -9 2440 89 3 0 chr20 5922469 5922773 -60745232 + AluSq SINE Alu 1 305 -8 2287 113 126 5 chr20 5923001 5923383 -60744622 - MSTA LTR MaLR 0 428 1 1726 153 3 14 chr20 5923593 5923880 -60744125 - AluJo SINE Alu -18 294 11 537 270 82 5 chr20 5924210 5924406 -60743599 + MIR SINE MIR 33 243 -19 2231 92 3 38 chr20 5924471 5924786 -60743219 - AluSx SINE Alu -8 304 1 1004 200 121 17 chr20 5924787 5925027 -60742978 - MLT1A1 LTR MaLR -11 354 90 2186 104 0 0 chr20 5925028 5925315 -60742690 + AluSx SINE Alu 1 287 -25 328 245 69 134 chr20 5925462 5925538 -60742467 - MIR SINE MIR -12 250 171 2324 107 3 0 chr20 5925538 5925836 -60742169 - AluSx SINE Alu -13 299 1 328 245 69 134 chr20 5925836 5925975 -60742030 - MIR SINE MIR -91 171 49 1324 186 79 52 chr20 5925990 5926280 -60741725 - AluJo SINE Alu -14 298 1 2063 57 0 42 chr20 5926656 5926919 -60741086 - AluY SINE Alu -4 307 56 1659 141 8 16 chr20 5926921 5927169 -60740836 + AluJb SINE Alu 54 299 -13 2085 142 3 0 chr20 5927468 5927764 -60740241 + AluSx SINE Alu 1 297 -15 2260 125 3 0 chr20 5928514 5928825 -60739180 - AluSx SINE Alu 0 312 1 919 203 0 0 chr20 5929801 5929959 -60738046 + FRAM SINE Alu 3 160 -6 2144 113 0 3 chr20 5930034 5930326 -60737679 - AluSx SINE Alu -21 291 1 2197 116 3 0 chr20 5931768 5932071 -60735934 - AluSx SINE Alu -8 304 1 2357 85 10 3 chr20 5932417 5932723 -60735282 + AluSx SINE Alu 1 308 -4 260 333 0 0 chr20 5932736 5932808 -60735197 - MIR SINE MIR -55 153 82 21 36 0 0 chr20 5932959 5932987 -60735018 + AT_rich Low_complexity Low_complexity 1 28 0 2592 42 3 7 chr20 5932987 5933297 -60734708 - AluY SINE Alu -2 309 1 437 293 61 24 chr20 5933782 5933994 -60734011 - MIR SINE MIR -12 250 31 2441 93 0 0 chr20 5934061 5934361 -60733644 + AluSx SINE Alu 1 300 -12 3250 94 11 18 chr20 5934577 5934842 -60733163 + MER39B LTR ERV1 1 263 -390 1799 167 13 26 chr20 5934842 5935153 -60732852 + AluJo SINE Alu 1 307 -5 3250 94 11 18 chr20 5935153 5935344 -60732661 + MER39B LTR ERV1 263 454 -199 449 215 14 93 chr20 5935350 5935512 -60732493 - L1MDb LINE L1 -5753 656 452 1117 138 64 15 chr20 5935532 5935735 -60732270 + MER39B LTR ERV1 441 653 0 270 157 20 0 chr20 5936208 5936259 -60731746 + L2 LINE L2 3221 3272 0 2018 114 26 19 chr20 5937398 5937705 -60730300 + AluSx SINE Alu 2 310 -2 2386 103 0 0 chr20 5937842 5938142 -60729863 + AluSq SINE Alu 1 300 -13 4585 193 103 29 chr20 5938162 5938995 -60729010 + L1MDb LINE L1 3 773 -5636 2276 101 0 3 chr20 5938995 5939301 -60728704 - AluSx SINE Alu -7 305 1 4585 193 103 29 chr20 5939301 5939428 -60728577 + L1MDb LINE L1 773 889 -5520 1733 189 0 0 chr20 5939428 5939709 -60728296 + AluJo SINE Alu 1 281 -31 4585 193 103 29 chr20 5939709 5939834 -60728171 + L1MDb LINE L1 889 1003 -5406 1961 145 7 3 chr20 5939834 5940138 -60727867 + AluJb SINE Alu 5 309 -3 4585 193 103 29 chr20 5940138 5940167 -60727838 + L1MDb LINE L1 1003 1202 -5207 880 189 6 0 chr20 5940170 5940350 -60727655 + L1M4 LINE L1 5127 5307 -839 2893 175 33 58 chr20 5940369 5940955 -60727050 - L1M3 LINE L1 -634 5537 4938 1848 128 0 0 chr20 5940955 5941213 -60726792 - AluSx SINE Alu 0 312 55 2893 175 33 58 chr20 5941213 5941245 -60726760 - L1M3 LINE L1 -1233 4938 4907 1962 126 0 4 chr20 5941245 5941522 -60726483 - AluSx SINE Alu -36 276 1 2893 175 33 58 chr20 5941522 5941803 -60726202 - L1M3 LINE L1 -1264 4907 4666 2010 109 7 7 chr20 5942283 5942557 -60725448 - AluSq SINE Alu -39 274 1 576 229 6 59 chr20 5942634 5942804 -60725201 + MIR SINE MIR 32 192 -70 2162 121 0 0 chr20 5943504 5943815 -60724190 + AluSx SINE Alu 1 311 0 2250 116 0 10 chr20 5943862 5944172 -60723833 + AluSx SINE Alu 1 307 -5 2555 50 0 35 chr20 5944247 5944564 -60723441 + AluY SINE Alu 1 306 -5 2073 139 0 7 chr20 5945092 5945395 -60722610 + AluJb SINE Alu 1 301 -11 213 203 47 31 chr20 5945707 5945771 -60722234 + GA-rich Low_complexity Low_complexity 4 68 0 1873 166 0 7 chr20 5945826 5946128 -60721877 + AluJo SINE Alu 1 300 -12 965 218 95 93 chr20 5946479 5946852 -60721153 - MLT1H1 LTR MaLR 0 555 184 2446 74 7 0 chr20 5946852 5947149 -60720856 - AluY SINE Alu -12 299 1 965 218 95 93 chr20 5947149 5947160 -60720845 - MLT1H1 LTR MaLR -371 184 175 2164 68 0 4 chr20 5947160 5947425 -60720580 - AluY SINE Alu -7 304 41 965 218 95 93 chr20 5947425 5947449 -60720556 - MLT1H1 LTR MaLR -380 175 153 1902 136 0 60 chr20 5947449 5947765 -60720240 + AluJb SINE Alu 1 297 -15 965 218 95 93 chr20 5947765 5947795 -60720210 - MLT1H1 LTR MaLR -402 153 114 1753 176 0 40 chr20 5947837 5948161 -60719844 - AluJb SINE Alu -1 311 1 301 189 37 0 chr20 5948168 5948232 -60719773 - MLT1H LTR MaLR -409 140 1 1174 145 34 24 chr20 5948551 5948758 -60719247 + MER20 DNA MER1_type 1 209 -10 23 33 0 0 chr20 5948928 5948958 -60719047 + AT_rich Low_complexity Low_complexity 1 30 0 2138 105 27 0 chr20 5948959 5949253 -60718752 + AluSx SINE Alu 1 302 -10 201 303 0 0 chr20 5949352 5949418 -60718587 + (TATG)n Simple_repeat Simple_repeat 2 67 0 335 229 60 0 chr20 5949486 5949569 -60718436 - MLT1I LTR MaLR -8 401 314 2233 115 7 0 chr20 5949619 5949923 -60718082 - AluSq SINE Alu -7 306 1 718 279 32 9 chr20 5950894 5951113 -60716892 + MIR SINE MIR 35 258 -4 192 152 0 0 chr20 5951155 5951188 -60716817 + CT-rich Low_complexity Low_complexity 4 36 0 1058 161 8 3 chr20 5951189 5951428 -60716577 - AluJb SINE Alu -5 307 2 1852 161 16 26 chr20 5951705 5952016 -60715989 - AluJo SINE Alu -4 308 1 2348 93 0 16 chr20 5952136 5952448 -60715557 + AluSc SINE Alu 1 307 -2 1697 132 0 13 chr20 5952576 5952811 -60715194 + AluSx SINE Alu 1 232 -80 2142 99 4 0 chr20 5953717 5953989 -60714016 - AluSp SINE Alu -25 288 16 2177 128 0 0 chr20 5954150 5954448 -60713557 - AluSx SINE Alu -14 298 1 764 207 0 0 chr20 5954577 5954712 -60713293 - AluJo SINE Alu -177 135 1 344 118 59 12 chr20 5955841 5955926 -60712079 + CT-rich Low_complexity Low_complexity 4 92 0 1224 193 57 11 chr20 5955927 5956191 -60711814 - AluJo SINE Alu -8 304 29 1981 125 50 0 chr20 5956547 5956827 -60711178 + AluSg SINE Alu 1 294 -16 299 274 0 12 chr20 5956897 5956981 -60711024 + (CATA)n Simple_repeat Simple_repeat 4 86 0 566 253 80 45 chr20 5956995 5957277 -60710728 - L1ME1 LINE L1 -229 5937 5658 937 161 73 69 chr20 5958204 5958422 -60709583 + MER20 DNA MER1_type 1 219 0 2354 95 0 0 chr20 5958524 5958819 -60709186 + AluSg SINE Alu 1 295 -15 226 318 155 20 chr20 5958906 5959054 -60708951 + MIR3 SINE MIR 34 201 -7 1864 137 41 20 chr20 5959159 5959451 -60708554 + AluSx SINE Alu 1 298 -14 1919 161 0 3 chr20 5960120 5960418 -60707587 + AluJo SINE Alu 1 297 -15 547 262 43 0 chr20 5960439 5960580 -60707425 + MIR SINE MIR 57 203 -59 318 106 0 0 chr20 5960602 5960649 -60707356 + (T)n Simple_repeat Simple_repeat 1 47 0 395 186 39 20 chr20 5961298 5961400 -60706605 - L2 LINE L2 -1 3312 3209 1988 161 0 3 chr20 5961412 5961723 -60706282 - AluJb SINE Alu -2 310 1 2132 115 3 7 chr20 5961753 5962048 -60705957 + AluSx SINE Alu 1 294 -18 2254 112 0 10 chr20 5962489 5962803 -60705202 - AluJb SINE Alu -1 311 1 2005 125 33 10 chr20 5963196 5963500 -60704505 - AluJb SINE Alu -1 311 1 702 225 30 6 chr20 5963723 5963892 -60704113 - MER5B DNA MER1_type -5 173 1 197 274 245 29 chr20 5963900 5964002 -60704003 - MER5A DNA MER1_type 0 189 66 806 223 96 5 chr20 5964017 5964214 -60703791 + MER58C DNA MER1_type 1 215 0 2080 164 0 0 chr20 5964348 5964658 -60703347 + AluSx SINE Alu 3 312 0 27 62 0 0 chr20 5964730 5964778 -60703227 + AT_rich Low_complexity Low_complexity 1 48 0 347 322 27 34 chr20 5965055 5965204 -60702801 - MIR3 SINE MIR -43 165 18 975 244 22 32 chr20 5965306 5965335 -60702670 - L1MEc LINE L1 -5414 982 954 1979 137 10 7 chr20 5965335 5965642 -60702363 + AluJb SINE Alu 1 308 -4 975 244 22 32 chr20 5965642 5965928 -60702077 - L1MEc LINE L1 -5442 954 670 351 0 0 0 chr20 5965942 5965981 -60702024 + (TC)n Simple_repeat Simple_repeat 2 40 0 * 369 0 0 0 chr20 5965980 5966021 -60701984 + (TG)n Simple_repeat Simple_repeat 2 42 0 248 121 0 0 chr20 5966021 5966054 -60701951 - Alu SINE Alu -100 33 1 306 325 16 8 chr20 5966106 5966229 -60701776 - L1MEc LINE L1 -5775 621 498 2189 103 37 0 chr20 5966623 5966923 -60701082 - AluSx SINE Alu -1 311 1 2229 102 22 140 chr20 5967157 5967411 -60700594 - LTR45B LTR ERV1 -91 398 218 2137 131 3 0 chr20 5967411 5967709 -60700296 - AluSx SINE Alu -13 299 1 2229 102 22 140 chr20 5967709 5967904 -60700101 - LTR45B LTR ERV1 -271 218 2 1906 162 0 7 chr20 5968087 5968390 -60699615 + AluJo SINE Alu 1 301 -11 2147 100 19 26 chr20 5968482 5968793 -60699212 - AluSx SINE Alu -3 309 1 475 244 43 0 chr20 5968947 5969062 -60698943 - L2 LINE L2 -5 3267 3148 2215 88 3 11 chr20 5969775 5970083 -60697922 + AluSx SINE Alu 1 306 0 519 204 0 0 chr20 5970165 5970263 -60697742 - MLT1F LTR MaLR -59 508 411 743 283 57 32 chr20 5970318 5970597 -60697408 - MLT1F LTR MaLR -256 286 1 2203 107 0 3 chr20 5970723 5971013 -60696992 + AluSx SINE Alu 1 289 -23 24 0 0 0 chr20 5971013 5971037 -60696968 + AT_rich Low_complexity Low_complexity 1 24 0 201 152 0 0 chr20 5971072 5971105 -60696900 + (TG)n Simple_repeat Simple_repeat 2 34 0 1451 231 49 75 chr20 5971181 5971809 -60696196 + L2 LINE L2 1501 2112 -1202 630 171 120 8 chr20 5971851 5971968 -60696037 - AluSq/x SINE Alu -180 132 3 2309 115 3 0 chr20 5971983 5972295 -60695710 - AluSq SINE Alu 0 313 1 559 108 0 0 chr20 5972295 5972369 -60695636 + MER30 DNA MER1_type 126 199 -31 1231 280 119 8 chr20 5972407 5973115 -60694890 + L2 LINE L2 2522 3313 0 837 203 6 6 chr20 5974142 5974300 -60693705 + FRAM SINE Alu 1 158 -8 631 263 101 10 chr20 5975184 5975393 -60692612 + MIR SINE MIR 2 229 -33 595 240 101 35 chr20 5975581 5976014 -60691991 - LTR33 LTR ERVL 0 521 1 374 326 61 0 chr20 5976761 5976908 -60691097 + L2 LINE L2 3117 3272 0 1783 157 3 14 chr20 5977411 5977723 -60690282 - AluJo SINE Alu 0 309 1 1632 222 150 12 chr20 5978626 5978945 -60689060 + L1ME3A LINE L1 5583 5857 -313 2382 78 3 29 chr20 5978945 5979254 -60688751 + AluSp SINE Alu 1 301 -12 1632 222 150 12 chr20 5979254 5979433 -60688572 + L1ME3A LINE L1 5857 6150 -20 30 0 0 0 chr20 5979469 5979499 -60688506 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr20 5979538 5979567 -60688438 + AT_rich Low_complexity Low_complexity 1 29 0 198 0 0 0 chr20 5980275 5980297 -60687708 + (TC)n Simple_repeat Simple_repeat 1 22 0 354 215 70 82 chr20 5980309 5980467 -60687538 - L1ME4a LINE L1 -24 6097 5942 1766 172 24 0 chr20 5980492 5980788 -60687217 - AluSx SINE Alu -9 303 1 841 181 0 0 chr20 5981022 5981149 -60686856 - FLAM_A SINE Alu -6 127 1 298 146 0 36 chr20 5981289 5981396 -60686609 + L1PA12 LINE L1 6113 6217 0 551 80 60 50 chr20 5981796 5981896 -60686109 - L1PA15 LINE L1 -1 6164 6064 528 140 0 0 chr20 5982163 5982270 -60685735 + (GA)n Simple_repeat Simple_repeat 2 108 0 192 158 0 0 chr20 5982319 5982357 -60685648 + GA-rich Low_complexity Low_complexity 2 39 0 2083 166 46 3 chr20 5983241 5983591 -60684414 - MLT1A1 LTR MaLR 0 365 1 402 277 134 5 chr20 5985012 5985214 -60682791 + L2 LINE L2 2842 3069 -244 692 254 61 4 chr20 5985268 5985496 -60682509 + HAL1 LINE L1 727 967 -1540 275 225 12 25 chr20 5985589 5985669 -60682336 + HAL1 LINE L1 1824 1902 -605 662 175 12 105 chr20 5985755 5985841 -60682164 - Tigger2 DNA MER2_type 0 2718 2654 2866 62 3 11 chr20 5985841 5986213 -60681792 - L1PA11 LINE L1 -1 6173 5805 662 175 12 105 chr20 5986213 5986297 -60681708 - Tigger2 DNA MER2_type -64 2654 2564 * 1406 120 10 0 chr20 5986296 5986504 -60681501 - Tigger2 DNA MER2_type -2508 210 1 836 251 75 61 chr20 5986508 5986998 -60681007 + HAL1 LINE L1 2011 2507 0 2134 110 0 58 chr20 5987026 5987353 -60680652 + AluSx SINE Alu 1 308 -4 571 145 8 8 chr20 5987979 5988096 -60679909 + (TAGA)n Simple_repeat Simple_repeat 4 120 0 515 170 18 45 chr20 5988709 5988821 -60679184 + MIR SINE MIR 31 139 -123 350 314 50 6 chr20 5989216 5989375 -60678630 + LTR67 LTR ERVL 384 549 -8 269 203 29 14 chr20 5989382 5989451 -60678554 + MIR SINE MIR 157 226 -36 231 36 0 0 chr20 5989549 5989577 -60678428 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 181 306 0 32 chr20 5989635 5989697 -60678308 + MER5B DNA MER1_type 17 76 -102 297 0 0 0 chr20 5989718 5989751 -60678254 + (TG)n Simple_repeat Simple_repeat 1 33 0 596 187 0 41 chr20 5989776 5989899 -60678106 - L1ME3 LINE L1 0 6162 6045 263 222 32 0 chr20 5990984 5991047 -60676958 - HAL1 LINE L1 -923 1584 1520 1644 254 71 115 chr20 5991049 5992328 -60675677 - L1MEd LINE L1 -4878 1241 19 270 0 0 0 chr20 5993318 5993348 -60674657 + (TA)n Simple_repeat Simple_repeat 2 31 0 2289 101 0 10 chr20 5993348 5993645 -60674360 - AluSx SINE Alu -18 294 1 783 244 91 0 chr20 5993781 5993990 -60674015 - MIR SINE MIR -13 249 22 955 304 46 23 chr20 5994099 5994533 -60673472 + MARNA DNA Mariner 129 572 -14 184 182 0 0 chr20 5995772 5995805 -60672200 + MIR SINE MIR 113 145 -63 916 296 87 32 chr20 5996137 5996606 -60671399 + L1ME LINE L1 5319 5813 -349 246 240 0 0 chr20 5996736 5996786 -60671219 + (TATATG)n Simple_repeat Simple_repeat 1 50 0 1480 116 98 0 chr20 5996805 5997020 -60670985 + AluSx SINE Alu 1 236 -76 229 111 0 0 chr20 5997053 5997089 -60670916 - HSMAR1 DNA Mariner -1250 37 2 2946 6 0 0 chr20 5998225 5998537 -60669468 + AluYb8 SINE Alu 1 312 -6 789 139 9 0 chr20 5998545 5998699 -60669306 + FLAM_C SINE Alu 1 155 0 252 83 0 0 chr20 5998706 5998742 -60669263 + MER94 DNA DNA 79 114 -20 2389 90 0 10 chr20 5999044 5999356 -60668649 - AluSg SINE Alu 0 310 2 1701 185 0 29 chr20 5999753 6000066 -60667939 + AluJo SINE Alu 3 306 -6 631 136 25 111 chr20 6000078 6000277 -60667728 - MER33 DNA MER1_type -3 360 179 579 76 0 13 chr20 6000282 6000361 -60667644 + MSTA LTR MaLR 1 78 -348 200 109 43 22 chr20 6000373 6000419 -60667586 + (TTTAA)n Simple_repeat Simple_repeat 4 50 0 1906 133 17 7 chr20 6000483 6000776 -60667229 + MSTA LTR MaLR 133 428 0 589 175 56 32 chr20 6000782 6000908 -60667097 - MER33 DNA MER1_type -195 129 1 361 18 0 54 chr20 6000936 6000992 -60667013 + (TTCC)n Simple_repeat Simple_repeat 2 54 0 2122 114 31 0 chr20 6001008 6001297 -60666708 - AluSx SINE Alu -14 298 1 381 202 24 12 chr20 6001643 6001727 -60666278 - L2 LINE L2 -15 3298 3214 1856 91 0 0 chr20 6001765 6002022 -60665983 + AluSx SINE Alu 55 311 0 1856 147 3 33 chr20 6002390 6002554 -60665451 - AluJb SINE Alu -14 298 146 2258 117 0 0 chr20 6002554 6002853 -60665152 - AluSq SINE Alu -14 299 1 1856 147 3 33 chr20 6002853 6002995 -60665010 - AluJb SINE Alu -166 146 1 318 254 0 0 chr20 6003016 6003079 -60664926 - ERVL LTR ERVL -826 4938 4876 2347 141 33 85 chr20 6003198 6003420 -60664585 - L1MB2 LINE L1 -2 6169 5937 1788 148 3 39 chr20 6003420 6003725 -60664280 - AluJo SINE Alu -18 294 1 2347 141 33 85 chr20 6003725 6003911 -60664094 - L1MB2 LINE L1 -234 5937 5786 1926 156 0 0 chr20 6003911 6004219 -60663786 - AluSx SINE Alu 0 308 1 2347 141 33 85 chr20 6004219 6004292 -60663713 - L1MB2 LINE L1 -385 5786 5711 899 243 99 56 chr20 6004344 6004718 -60663287 + MLT1I LTR MaLR 16 405 -4 326 227 205 22 chr20 6004718 6004903 -60663102 - L2 LINE L2 -264 3049 2831 30 27 0 0 chr20 6005284 6005321 -60662684 + AT_rich Low_complexity Low_complexity 1 37 0 1911 95 76 0 chr20 6005499 6005809 -60662196 - AluSx SINE Alu 0 330 1 1808 133 17 24 chr20 6006074 6006367 -60661638 + AluJb SINE Alu 1 291 -21 2332 91 0 0 chr20 6006367 6006664 -60661341 + AluY SINE Alu 3 299 -12 22 0 0 0 chr20 6007053 6007075 -60660930 + AT_rich Low_complexity Low_complexity 1 22 0 1958 164 0 3 chr20 6007099 6007386 -60660619 + AluSx SINE Alu 1 286 -26 466 221 160 8 chr20 6007843 6007974 -60660031 - MER20 DNA MER1_type -17 202 52 1075 232 59 11 chr20 6008979 6009251 -60658754 - L1MC4 LINE L1 -213 7829 7545 315 0 0 0 chr20 6009424 6009459 -60658546 + (A)n Simple_repeat Simple_repeat 1 35 0 473 297 31 0 chr20 6010173 6010301 -60657704 - MIR3 SINE MIR -41 167 36 968 229 52 68 chr20 6010442 6010752 -60657253 - MLT1B LTR MaLR -85 305 1 235 175 79 16 chr20 6010752 6010815 -60657190 - Charlie4 DNA MER1_type -1708 253 187 2170 98 190 6 chr20 6010815 6011162 -60656843 + LTR57 LTR ERVL 1 411 0 983 143 11 48 chr20 6011169 6011358 -60656647 - Charlie4 DNA MER1_type -1779 182 1 804 252 73 57 chr20 6012066 6012502 -60655503 + LTR16A1 LTR ERVL 13 455 -2 25 0 0 0 chr20 6014650 6014675 -60653330 + AT_rich Low_complexity Low_complexity 1 25 0 817 171 0 0 chr20 6014682 6014799 -60653206 - FLAM_C SINE Alu -25 118 2 495 184 54 41 chr20 6014822 6014969 -60653036 - L1ME3A LINE L1 -1 6169 6021 23 0 0 0 chr20 6015197 6015220 -60652785 + AT_rich Low_complexity Low_complexity 1 23 0 2847 99 6 8 chr20 6015293 6015658 -60652347 - THE1B LTR MaLR 0 364 1 251 250 135 48 chr20 6015694 6015798 -60652207 + L2 LINE L2 2593 2705 -609 242 274 49 10 chr20 6016064 6016166 -60651839 + L1P LINE L1 4954 5059 -1087 372 292 28 96 chr20 6016367 6016702 -60651303 + L1ME LINE L1 5295 5605 -516 2329 94 0 3 chr20 6016702 6017001 -60651004 - AluSx SINE Alu -14 298 1 372 292 28 96 chr20 6017001 6017028 -60650977 + L1ME LINE L1 5605 5632 -489 273 228 49 41 chr20 6017039 6017162 -60650843 + MER113 DNA MER1_type? 8 131 -390 391 292 145 36 chr20 6017242 6017718 -60650287 - L2 LINE L2 -60 3253 2706 345 220 97 40 chr20 6017764 6017960 -60650045 + L1M4 LINE L1 4926 5137 -1009 2037 113 0 55 chr20 6017961 6018271 -60649734 - AluSq SINE Alu -17 296 4 799 161 8 8 chr20 6018308 6018432 -60649573 - AluJb SINE Alu -187 125 2 516 259 140 9 chr20 6018470 6018698 -60649307 + L1MC4 LINE L1 7781 8038 -4 1467 144 10 100 chr20 6018698 6018997 -60649008 - AluJo SINE Alu -22 290 19 595 296 96 16 chr20 6020009 6020259 -60647746 + L1MDa LINE L1 15 284 -6256 340 241 36 0 chr20 6020271 6020408 -60647597 + G-rich Low_complexity Low_complexity 3 144 0 4098 227 77 12 chr20 6020806 6022190 -60645815 + L1MDa LINE L1 792 2243 -4297 507 44 0 0 chr20 6022319 6022387 -60645618 - AluY SINE Alu -3 309 242 3201 225 87 20 chr20 6022389 6022806 -60645199 + MER21B LTR ERV1 19 407 -456 1867 118 52 4 chr20 6022806 6023101 -60644904 - AluSx SINE Alu 0 308 1 3201 225 87 20 chr20 6023101 6023473 -60644532 + MER21B LTR ERV1 407 862 -1 2533 208 91 77 chr20 6023486 6023993 -60644012 + L1MDa LINE L1 2240 2738 -3802 1514 167 15 23 chr20 6023993 6024305 -60643700 + AluJo SINE Alu 21 330 0 2533 208 91 77 chr20 6024305 6025074 -60642931 + L1MDa LINE L1 2738 3550 -2990 880 249 0 10 chr20 6025087 6025280 -60642725 + AluJb SINE Alu 120 310 -2 1177 197 80 11 chr20 6025354 6025628 -60642377 + L1MD2 LINE L1 6065 6357 -2 283 204 38 94 chr20 6025777 6025975 -60642030 - MLT1F LTR MaLR -270 139 1 2219 111 3 3 chr20 6025994 6026300 -60641705 - AluSp SINE Alu -2 311 6 2375 102 0 6 chr20 6026372 6026686 -60641319 - AluSx SINE Alu 0 312 1 1567 193 81 122 chr20 6027169 6027404 -60640601 + LTR49 LTR ERV1 5 248 -347 1672 200 0 7 chr20 6027404 6027714 -60640291 - AluJo SINE Alu -4 308 1 1567 193 81 122 chr20 6027714 6028094 -60639911 + LTR49 LTR ERV1 248 595 0 310 236 14 0 chr20 6028334 6028406 -60639599 - MER116 DNA Mariner -5 75 3 2739 105 11 6 chr20 6028419 6028781 -60639224 - THE1B LTR MaLR 0 364 1 759 227 7 0 chr20 6029087 6029241 -60638764 + MIR SINE MIR 12 166 -96 276 232 145 0 chr20 6029268 6029337 -60638668 + Tigger5 DNA MER2_type 1 79 -2244 302 258 0 0 chr20 6029339 6029405 -60638600 - Tigger5 DNA MER2_type -6 2317 2252 452 171 0 0 chr20 6029406 6029476 -60638529 + Tigger5 DNA MER2_type 2253 2322 -1 2293 96 3 10 chr20 6029511 6029814 -60638191 - AluSp SINE Alu -12 301 1 1565 158 0 8 chr20 6029818 6030072 -60637933 + AluJb SINE Alu 33 284 -28 369 0 0 0 chr20 6030072 6030113 -60637892 + (CA)n Simple_repeat Simple_repeat 2 42 0 220 270 95 32 chr20 6030792 6030918 -60637087 + MIR3 SINE MIR 64 197 -11 389 223 41 16 chr20 6031436 6031557 -60636448 - L1MC5 LINE L1 -54 7907 7784 342 0 0 0 chr20 6031557 6031595 -60636410 + (TG)n Simple_repeat Simple_repeat 1 38 0 183 186 305 0 chr20 6031603 6031662 -60636343 - MER5C DNA MER1_type 0 324 248 433 272 88 0 chr20 6031776 6031890 -60636115 - MER5C DNA MER1_type -200 124 1 614 220 69 86 chr20 6031896 6031989 -60636016 - L1MC5 LINE L1 -178 7783 7690 1760 154 0 7 chr20 6031989 6032262 -60635743 - AluJb SINE Alu -41 271 1 614 220 69 86 chr20 6032262 6032459 -60635546 - L1MC5 LINE L1 -271 7690 7498 322 284 164 0 chr20 6033247 6033363 -60634642 - LTR67 LTR ERVL -5 552 418 3741 203 24 47 chr20 6033553 6034545 -60633460 + LTR5 LTR ERVK 1 969 0 233 322 35 0 chr20 6034545 6034632 -60633373 - LTR67 LTR ERVL -370 187 98 1751 163 3 29 chr20 6034784 6035097 -60632908 - AluJo SINE Alu -6 306 2 1832 244 101 7 chr20 6035768 6036214 -60631791 - LTR16C LTR ERVL 0 491 4 2293 76 28 0 chr20 6036304 6036593 -60631412 + AluSp SINE Alu 3 299 -14 1351 50 106 0 chr20 6037478 6037688 -60630317 + AluSg/x SINE Alu 83 311 0 998 185 31 70 chr20 6037996 6038223 -60629782 + MER20 DNA MER1_type 1 218 -1 1120 115 32 0 chr20 6038602 6038759 -60629246 + U1 snRNA snRNA 1 162 -3 192 40 0 0 chr20 6038759 6038784 -60629221 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2340 69 0 33 chr20 6038786 6039092 -60628913 - AluY SINE Alu -15 296 1 2698 193 51 69 chr20 6039947 6039974 -60628031 + MER99 DNA DNA 130 156 -672 2055 129 0 0 chr20 6039974 6040276 -60627729 - AluSx SINE Alu -7 305 4 2698 193 51 69 chr20 6040276 6040562 -60627443 + MER99 DNA DNA 156 446 -382 2217 118 0 16 chr20 6040562 6040876 -60627129 - AluSx SINE Alu -3 309 1 2698 193 51 69 chr20 6040876 6041272 -60626733 + MER99 DNA DNA 446 827 -1 631 117 9 81 chr20 6042192 6042303 -60625702 - FRAM SINE Alu -75 101 1 377 238 55 93 chr20 6042878 6042970 -60625035 + MIR SINE MIR 11 105 -157 2213 103 3 39 chr20 6042970 6043282 -60624723 - AluSq SINE Alu -12 301 1 377 238 55 93 chr20 6043282 6043438 -60624567 + MIR SINE MIR 105 250 -12 1500 212 78 47 chr20 6043515 6043727 -60624278 - MLT1C LTR MaLR 0 467 263 479 84 127 0 chr20 6043727 6043798 -60624207 - MADE1 DNA Mariner 0 80 1 1500 212 78 47 chr20 6043798 6044033 -60623972 - MLT1C LTR MaLR -204 263 6 564 221 60 70 chr20 6044174 6044373 -60623632 + MER63A DNA MER1_type 1 197 -13 232 309 36 0 chr20 6044626 6044710 -60623295 + L2 LINE L2 3161 3247 -25 208 156 0 0 chr20 6044769 6044801 -60623204 + L2 LINE L2 3219 3250 -22 3240 266 60 18 chr20 6044988 6046277 -60621728 - L2 LINE L2 -27 3286 1942 7541 193 37 39 chr20 6046286 6046404 -60621601 + L1MB7 LINE L1 3347 3464 -2720 1597 192 10 20 chr20 6046404 6046701 -60621304 + AluJb SINE Alu 11 304 -8 7541 193 37 39 chr20 6046701 6049421 -60618584 + L1MB7 LINE L1 3464 6177 -7 520 292 53 19 chr20 6049434 6049643 -60618362 - MIR SINE MIR 0 262 47 2336 96 20 0 chr20 6051008 6051310 -60616695 - AluSx SINE Alu -4 308 1 183 80 0 0 chr20 6051773 6051798 -60616207 + (GGGAGA)n Simple_repeat Simple_repeat 2 26 0 1771 186 0 3 chr20 6051800 6052091 -60615914 + AluJo SINE Alu 1 290 -22 243 308 0 0 chr20 6053100 6053165 -60614840 + (TG)n Simple_repeat Simple_repeat 1 65 0 1658 225 80 40 chr20 6053589 6053623 -60614382 + L1ME2 LINE L1 5554 5585 -579 1599 188 26 3 chr20 6053623 6053926 -60614079 + AluJo SINE Alu 2 311 -1 1658 225 80 40 chr20 6053926 6054485 -60613520 + L1ME2 LINE L1 5585 6164 0 861 222 103 107 chr20 6055670 6056138 -60611867 + LTR33A LTR ERVL 7 472 -51 403 188 14 0 chr20 6056375 6056444 -60611561 + AluJ/FLAM SINE Alu 2 71 -241 180 0 0 0 chr20 6056449 6056469 -60611536 + (A)n Simple_repeat Simple_repeat 1 20 0 694 251 24 104 chr20 6056485 6056695 -60611310 + L1M4 LINE L1 4537 4693 -1453 1920 176 0 3 chr20 6056695 6057008 -60610997 + AluJb SINE Alu 1 312 0 694 251 24 104 chr20 6057008 6057247 -60610758 + L1M4 LINE L1 4693 4950 -1196 2245 93 3 0 chr20 6057248 6057539 -60610466 + AluY SINE Alu 1 292 -19 1177 204 11 8 chr20 6058063 6058323 -60609682 - L1MC4 LINE L1 0 8042 7782 375 169 0 0 chr20 6058323 6058394 -60609611 + CT-rich Low_complexity Low_complexity 2 72 0 924 136 0 0 chr20 6058394 6058526 -60609479 - AluSq/x SINE Alu -180 133 2 329 149 218 11 chr20 6058527 6058562 -60609443 - L1MC4a LINE L1 -106 7702 7676 645 14 0 0 chr20 6058562 6058636 -60609369 + (CAATA)n Simple_repeat Simple_repeat 2 75 0 329 149 218 11 chr20 6058636 6058687 -60609318 - L1MC4a LINE L1 -132 7676 7598 228 67 0 0 chr20 6061177 6061207 -60606798 + (TG)n Simple_repeat Simple_repeat 2 31 0 24 32 0 0 chr20 6061685 6061716 -60606289 + AT_rich Low_complexity Low_complexity 1 31 0 1076 141 61 5 chr20 6061739 6061937 -60606068 - L1MB7 LINE L1 0 6184 5976 2369 109 0 6 chr20 6062166 6062479 -60605526 - AluSx SINE Alu -1 311 1 29 60 0 0 chr20 6063870 6063920 -60604085 + AT_rich Low_complexity Low_complexity 1 50 0 2113 102 32 3 chr20 6064276 6064560 -60603445 - AluSg SINE Alu -18 292 1 482 214 145 0 chr20 6064565 6064696 -60603309 - L1ME3A LINE L1 -2 6168 6019 444 298 60 18 chr20 6065608 6065776 -60602229 + MIR3 SINE MIR 33 207 -1 2158 102 3 48 chr20 6066404 6066719 -60601286 + AluSq SINE Alu 5 305 -8 1479 115 8 47 chr20 6066730 6066964 -60601041 + AluSg/x SINE Alu 84 308 -4 2381 100 0 0 chr20 6067078 6067389 -60600616 + AluY SINE Alu 1 311 0 725 293 75 14 chr20 6067975 6068255 -60599750 - MER102a DNA MER1_type -32 298 2 1423 188 104 20 chr20 6068903 6069248 -60598757 - MLT1A2 LTR MaLR 0 374 1 1090 116 52 174 chr20 6069538 6069883 -60598122 - MER33 DNA MER1_type 0 324 22 231 269 75 54 chr20 6070507 6070600 -60597405 + MIR3 SINE MIR 114 208 0 588 221 104 12 chr20 6072856 6073019 -60594986 - MER5B DNA MER1_type 0 178 1 638 191 191 0 chr20 6073239 6073396 -60594609 - MER5A DNA MER1_type -2 187 1 1466 120 171 12 chr20 6074351 6074609 -60593396 + AluSg SINE Alu 2 300 0 474 18 0 0 chr20 6074616 6074671 -60593334 + (TA)n Simple_repeat Simple_repeat 1 55 0 288 0 0 0 chr20 6074670 6074702 -60593303 + (GA)n Simple_repeat Simple_repeat 2 33 0 * 2033 148 0 3 chr20 6074702 6074999 -60593006 + AluJb SINE Alu 2 297 -15 422 267 139 0 chr20 6075017 6075189 -60592816 + MIR SINE MIR 61 256 -6 504 196 65 82 chr20 6075355 6075656 -60592349 - LTR48 LTR ERV1 -6 781 378 986 170 131 5 chr20 6077876 6078082 -60589923 - MER34C LTR ERV1 -353 232 1 1138 263 24 58 chr20 6078319 6078472 -60589533 + LTR16C LTR ERVL 89 246 -245 1965 204 12 46 chr20 6078472 6078953 -60589052 - MLT1C LTR MaLR -2 465 1 1138 263 24 58 chr20 6078953 6079214 -60588791 + LTR16C LTR ERVL 246 489 -2 210 37 0 0 chr20 6079490 6079517 -60588488 + (CA)n Simple_repeat Simple_repeat 1 27 0 1496 215 111 14 chr20 6079885 6080309 -60587696 + MLT1C LTR MaLR 3 467 0 2181 105 7 3 chr20 6080546 6080840 -60587165 + AluSq SINE Alu 1 295 -18 1999 245 120 7 chr20 6080949 6081736 -60586269 - L2 LINE L2 -266 3047 2178 2010 180 42 102 chr20 6081737 6081988 -60586017 + LTR55 LTR ERV 2 267 -281 1973 131 0 11 chr20 6081988 6082270 -60585735 + AluJb SINE Alu 26 304 -8 2010 180 42 102 chr20 6082270 6082595 -60585410 + LTR55 LTR ERV 267 543 -5 814 236 51 4 chr20 6082595 6082832 -60585173 - L2 LINE L2 -1135 2179 1932 1290 163 80 64 chr20 6082967 6083280 -60584725 - MER58B DNA MER1_type 0 341 24 2161 117 3 7 chr20 6083344 6083644 -60584361 - AluSx SINE Alu -13 299 1 183 80 0 0 chr20 6083653 6083678 -60584327 + (TTTAA)n Simple_repeat Simple_repeat 2 26 0 186 71 0 0 chr20 6083988 6084016 -60583989 + (A)n Simple_repeat Simple_repeat 1 28 0 574 207 32 48 chr20 6084864 6085052 -60582953 + MER5A DNA MER1_type 3 187 -2 2175 110 10 0 chr20 6085481 6085782 -60582223 - AluSx SINE Alu -8 304 1 225 250 0 0 chr20 6086273 6086349 -60581656 + (TATATG)n Simple_repeat Simple_repeat 6 81 0 377 121 0 15 chr20 6087415 6087481 -60580524 + (TCCC)n Simple_repeat Simple_repeat 4 68 0 724 249 12 12 chr20 6087484 6087649 -60580356 - FRAM SINE Alu -1 165 1 2432 84 3 6 chr20 6087748 6088059 -60579946 + AluSg SINE Alu 1 310 0 1017 245 111 58 chr20 6088429 6088861 -60579144 + LTR16B LTR ERVL 10 464 0 1489 146 3 128 chr20 6089164 6089507 -60578498 - AluY SINE Alu 0 301 2 27 73 0 0 chr20 6092605 6092660 -60575345 + AT_rich Low_complexity Low_complexity 1 55 0 893 272 192 17 chr20 6093498 6094208 -60573797 + L2 LINE L2 2453 3299 -14 26 0 0 0 chr20 6094315 6094341 -60573664 + AT_rich Low_complexity Low_complexity 1 26 0 378 328 66 8 chr20 6094383 6094627 -60573378 - MIR SINE MIR 0 262 5 205 306 28 0 chr20 6094707 6094779 -60573226 - MIR SINE MIR -88 120 47 422 293 117 46 chr20 6095563 6095802 -60572203 - MIR SINE MIR -6 256 1 273 209 152 29 chr20 6096008 6096113 -60571892 + LTR33 LTR ERVL 366 483 -38 1291 164 24 0 chr20 6096321 6096528 -60571477 + AluJb SINE Alu 1 212 -100 660 200 0 0 chr20 6096553 6096698 -60571307 + AluSg/x SINE Alu 166 310 0 752 143 0 9 chr20 6097119 6097231 -60570774 + AluJb SINE Alu 15 125 -187 2070 96 17 43 chr20 6097618 6097919 -60570086 + AluSx SINE Alu 1 293 -19 228 164 0 49 chr20 6100032 6100093 -60567912 - L1MC2 LINE L1 -11 6333 6276 509 245 121 29 chr20 6101248 6101562 -60566443 - LTR33A LTR ERVL -16 507 307 325 309 171 6 chr20 6101664 6101839 -60566166 - LTR50 LTR ERVL -576 219 16 297 0 0 0 chr20 6101986 6102019 -60565986 + (TG)n Simple_repeat Simple_repeat 1 33 0 2509 64 0 0 chr20 6102024 6102320 -60565685 - AluY SINE Alu -15 296 1 701 255 52 14 chr20 6103302 6103514 -60564491 + MIR SINE MIR 14 233 -29 2047 117 33 10 chr20 6104314 6104614 -60563391 - AluSc SINE Alu -2 307 1 1604 148 112 11 chr20 6104963 6105240 -60562765 - AluSg1 SINE Alu -3 306 2 1219 139 93 9 chr20 6106074 6106290 -60561715 + MER46A DNA MER2_type 3 236 0 2309 83 7 0 chr20 6106638 6106927 -60561078 + AluSc SINE Alu 1 291 -18 845 268 85 55 chr20 6108056 6108238 -60559767 - L1ME3 LINE L1 -327 5835 5660 2284 79 0 0 chr20 6108238 6108518 -60559487 - AluSg SINE Alu -4 306 27 845 268 85 55 chr20 6108518 6108826 -60559179 - L1ME3 LINE L1 -502 5660 5362 985 182 0 12 chr20 6108826 6108991 -60559014 - FRAM SINE Alu -2 164 2 845 268 85 55 chr20 6108991 6109201 -60558804 - L1ME3 LINE L1 -800 5362 5098 2198 104 3 0 chr20 6109201 6109489 -60558516 + AluSp SINE Alu 1 289 -24 845 268 85 55 chr20 6109489 6109605 -60558400 - L1ME3 LINE L1 -1064 5098 4987 826 155 0 8 chr20 6109642 6109771 -60558234 + FLAM_A SINE Alu 1 128 -5 601 151 0 11 chr20 6110186 6110279 -60557726 - AluJb SINE Alu -12 300 209 855 223 178 98 chr20 6110443 6110903 -60557102 - MLT1F1 LTR MaLR 0 595 82 2973 6 0 0 chr20 6110903 6111221 -60556784 - AluYb8 SINE Alu 0 318 1 855 223 178 98 chr20 6111221 6111311 -60556694 - MLT1F1 LTR MaLR -513 82 1 2303 80 3 29 chr20 6112070 6112383 -60555622 - AluY SINE Alu -6 305 1 189 310 149 23 chr20 6112964 6113051 -60554954 - MIR SINE MIR -117 145 48 814 126 0 0 chr20 6113085 6113196 -60554809 + HY1 scRNA scRNA 1 111 -1 225 296 14 0 chr20 6114437 6114508 -60553497 - HAL1 LINE L1 -623 1884 1813 467 277 161 43 chr20 6114514 6115077 -60552928 - HAL1 LINE L1 -788 1719 992 309 244 58 12 chr20 6116619 6116659 -60551346 - MLT1L LTR MaLR -11 604 567 1417 183 71 77 chr20 6116659 6116820 -60551185 + MER58B DNA MER1_type 5 165 -2255 2382 73 3 0 chr20 6116820 6117106 -60550899 + AluSq SINE Alu 11 297 -16 1417 183 71 77 chr20 6117106 6117282 -60550723 + MER58B DNA MER1_type 165 340 -1 309 244 58 12 chr20 6117282 6117327 -60550678 - MLT1L LTR MaLR -48 567 515 548 258 71 11 chr20 6117507 6117689 -60550316 + MIR SINE MIR 12 204 -58 2260 113 0 0 chr20 6117857 6118158 -60549847 + AluSx SINE Alu 1 301 -11 839 214 66 11 chr20 6118629 6118811 -60549194 + MER58A DNA MER1_type 30 221 -3 335 193 159 11 chr20 6118835 6118923 -60549082 - LTR16C LTR ERVL 0 491 391 398 273 91 6 chr20 6119055 6119220 -60548785 - LTR16C LTR ERVL -296 195 17 1539 186 0 36 chr20 6119345 6119652 -60548353 - AluJo SINE Alu -3 309 14 1959 169 87 28 chr20 6119652 6120042 -60547963 + MER4B LTR ERV1 1 413 -197 1728 153 3 23 chr20 6120741 6121041 -60546964 - AluJb SINE Alu -5 307 14 1219 148 0 0 chr20 6121095 6121277 -60546728 - AluSg/x SINE Alu -5 305 124 2069 136 0 0 chr20 6122211 6122498 -60545507 - AluSx SINE Alu -21 291 5 1699 181 21 3 chr20 6122687 6122975 -60545030 - AluJb SINE Alu -19 293 1 428 313 50 19 chr20 6123099 6123259 -60544746 + MER5B DNA MER1_type 13 177 -1 1849 176 0 0 chr20 6123526 6123827 -60544178 + AluJo SINE Alu 3 303 -9 2545 65 0 0 chr20 6124034 6124343 -60543662 - AluY SINE Alu -2 309 1 587 134 214 36 chr20 6124582 6124694 -60543311 + AluJo/FLAM SINE Alu 2 133 -179 1641 184 13 20 chr20 6124697 6124877 -60543128 + AluJo SINE Alu 6 185 -127 2261 189 111 34 chr20 6124877 6125401 -60542604 - LTR6A LTR ERV1 0 564 1 1641 184 13 20 chr20 6125401 6125525 -60542480 + AluJo SINE Alu 185 308 -4 255 219 141 0 chr20 6125704 6125768 -60542237 - MER91B DNA MER1_type -116 74 2 501 284 204 10 chr20 6125770 6125971 -60542034 - MIR SINE MIR -17 245 6 431 248 115 73 chr20 6126144 6126378 -60541627 + MIR SINE MIR 19 262 0 280 215 183 11 chr20 6126905 6126998 -60541007 + L2 LINE L2 3198 3306 -7 1993 121 24 24 chr20 6127114 6127411 -60540594 - AluSx SINE Alu -15 297 1 3011 246 103 36 chr20 6127682 6128958 -60539047 + L2 LINE L2 1953 3313 0 1877 148 0 0 chr20 6129162 6129440 -60538565 + AluSx SINE Alu 26 303 -9 410 283 9 9 chr20 6129471 6129584 -60538421 + MER58 DNA MER1_type 2 114 -2306 238 223 117 21 chr20 6130511 6130605 -60537400 + HAL1b LINE L1 77 179 -1169 2227 116 3 0 chr20 6131966 6132267 -60535738 + AluSx SINE Alu 1 302 -10 299 309 43 12 chr20 6132329 6132491 -60535514 + L1ME4a LINE L1 5603 5769 -352 230 322 25 8 chr20 6132510 6132631 -60535374 + L1ME4a LINE L1 5835 5957 -164 2386 78 7 3 chr20 6133711 6134006 -60533999 + AluSc SINE Alu 1 296 -13 2078 129 0 3 chr20 6134098 6134393 -60533612 - AluSx SINE Alu -18 294 1 1827 148 10 10 chr20 6135371 6135674 -60532331 - AluJb SINE Alu -9 303 1 752 252 102 29 chr20 6136204 6136517 -60531488 - L1MC4a LINE L1 -1899 5909 5574 2299 102 0 3 chr20 6136726 6137021 -60530984 + AluSx SINE Alu 1 294 -18 233 189 74 82 chr20 6137116 6137238 -60530767 - L1MC4a LINE L1 -1849 5959 5839 181 279 313 25 chr20 6137453 6137654 -60530351 + MIR SINE MIR 3 261 -1 2084 119 10 0 chr20 6137668 6137963 -60530042 - AluSx SINE Alu -14 298 1 2219 111 0 13 chr20 6138616 6138923 -60529082 - AluSx SINE Alu -8 304 2 422 261 0 0 chr20 6140261 6140349 -60527656 + L2 LINE L2 3168 3255 -17 574 256 12 25 chr20 6140751 6140817 -60527188 + MIR SINE MIR 51 116 -146 521 111 0 25 chr20 6140817 6140898 -60527107 - MADE1 DNA Mariner -1 79 1 574 256 12 25 chr20 6140898 6140991 -60527014 + MIR SINE MIR 116 208 -54 280 329 13 0 chr20 6141254 6141330 -60526675 + L2 LINE L2 3160 3236 -36 204 319 106 38 chr20 6142404 6142564 -60525441 + MIR SINE MIR 65 235 -27 438 65 0 0 chr20 6143009 6143071 -60524934 + (CA)n Simple_repeat Simple_repeat 1 62 0 1459 185 10 49 chr20 6143167 6143475 -60524530 + AluJo SINE Alu 3 298 -14 545 148 32 84 chr20 6143612 6143767 -60524238 - MER58 DNA MER1_type -109 232 86 423 318 116 55 chr20 6143801 6144291 -60523714 - LTR67 LTR ERVL -15 542 23 344 297 185 0 chr20 6144291 6144513 -60523492 + HAL1b LINE L1 514 776 -572 1683 183 24 7 chr20 6144546 6144841 -60523164 + AluJo SINE Alu 1 300 -12 1081 128 0 0 chr20 6144919 6145067 -60522938 + AluSg/x SINE Alu 137 284 -26 25 0 0 0 chr20 6145232 6145257 -60522748 + AT_rich Low_complexity Low_complexity 1 25 0 229 156 178 0 chr20 6145292 6145337 -60522668 + MER74B LTR ERVL 1 53 -569 404 261 134 8 chr20 6145491 6145625 -60522380 + MER74B LTR ERVL 413 563 -59 2196 100 19 7 chr20 6145719 6146028 -60521977 - AluSp SINE Alu 0 313 1 741 211 0 8 chr20 6146033 6146161 -60521844 - FLAM_A SINE Alu -6 127 1 1319 150 146 16 chr20 6146173 6146426 -60521579 - AluJo SINE Alu -26 286 1 280 263 0 61 chr20 6146828 6146942 -60521063 + MLT2F LTR ERVL 38 144 -519 228 229 0 92 chr20 6147679 6147788 -60520217 - L1MC4 LINE L1 -1334 6708 6610 313 96 11 85 chr20 6147821 6147998 -60520007 + (TA)n Simple_repeat Simple_repeat 1 164 0 1115 203 56 36 chr20 6148200 6148506 -60519499 + MLT1D LTR MaLR 3 314 -191 2280 107 10 0 chr20 6148541 6148839 -60519166 - AluSx SINE Alu -11 301 1 1537 173 6 58 chr20 6148926 6149238 -60518767 + AluJo SINE Alu 1 296 -16 2198 160 15 0 chr20 6149616 6149948 -60518057 - MER1B DNA MER1_type 0 337 1 2006 143 13 10 chr20 6150280 6150594 -60517411 + 7SLRNA srpRNA srpRNA 1 315 -5 1008 160 0 32 chr20 6150935 6151122 -60516883 - AluJb SINE Alu -22 290 110 674 156 0 0 chr20 6151185 6151281 -60516724 - AluJ/FLAM SINE Alu -216 96 1 1975 120 0 0 chr20 6151618 6151885 -60516120 + AluSp SINE Alu 3 269 -44 242 0 61 0 chr20 6151900 6151933 -60516072 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 28 29 0 0 chr20 6152319 6152354 -60515651 + AT_rich Low_complexity Low_complexity 1 35 0 28 29 0 0 chr20 6153504 6153539 -60514466 + AT_rich Low_complexity Low_complexity 1 35 0 447 231 48 0 chr20 6153911 6154015 -60513990 + MIR SINE MIR 92 200 -62 23 33 0 0 chr20 6154062 6154092 -60513913 + AT_rich Low_complexity Low_complexity 1 30 0 2501 82 0 0 chr20 6157590 6157896 -60510109 + AluSg SINE Alu 1 306 -4 808 129 0 95 chr20 6157967 6158114 -60509891 - FLAM_C SINE Alu 0 133 1 1617 143 0 8 chr20 6159348 6159586 -60508419 + AluJo SINE Alu 67 302 -10 2126 117 13 0 chr20 6160124 6160432 -60507573 - AluSx SINE Alu 0 312 1 219 318 24 47 chr20 6160795 6160880 -60507125 - L2 LINE L2 -624 2690 2608 959 274 179 59 chr20 6160880 6161770 -60506235 - L2 LINE L2 -658 2656 1874 734 160 48 0 chr20 6161770 6161895 -60506110 - FLAM_A SINE Alu -1 132 2 959 274 179 59 chr20 6161895 6162520 -60505485 - L2 LINE L2 -1440 1874 960 681 213 86 25 chr20 6162647 6162844 -60505161 - MIR SINE MIR -2 260 52 243 363 33 0 chr20 6163046 6163137 -60504868 - Charlie8 DNA MER1_type -2132 285 192 26 50 0 0 chr20 6163329 6163369 -60504636 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr20 6163874 6163895 -60504110 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr20 6165002 6165023 -60502982 + (TG)n Simple_repeat Simple_repeat 1 21 0 616 156 0 0 chr20 6165030 6165126 -60502879 - AluJ/FLAM SINE Alu -215 97 2 510 280 95 19 chr20 6165290 6165501 -60502504 - HAL1 LINE L1 -679 1828 1602 1260 179 22 0 chr20 6165527 6165750 -60502255 - AluJb SINE Alu 0 312 85 335 325 19 0 chr20 6165751 6165911 -60502094 - HAL1 LINE L1 -912 1595 1433 1604 215 99 128 chr20 6166049 6166483 -60501522 - L1MEd LINE L1 -1317 4812 4367 2065 142 7 3 chr20 6166483 6166785 -60501220 + AluSx SINE Alu 1 303 -9 1604 215 99 128 chr20 6166785 6167190 -60500815 - L1MEd LINE L1 -1762 4367 3952 546 167 222 0 chr20 6167190 6167298 -60500707 - FLAM_C SINE Alu -10 133 2 1604 215 99 128 chr20 6167298 6167771 -60500234 - L1MEd LINE L1 -2177 3952 3433 368 135 0 0 chr20 6167936 6167988 -60500017 - MER66B LTR ERV1 -140 346 295 502 229 87 8 chr20 6167988 6168241 -60499764 - L1MEd LINE L1 -2801 3328 3056 1740 103 0 74 chr20 6168258 6168529 -60499476 - AluSx SINE Alu -61 251 1 456 156 231 0 chr20 6168549 6168735 -60499270 - Charlie5 DNA MER1_type -32 2580 2352 795 264 115 72 chr20 6168750 6169175 -60498830 - L1MEd LINE L1 -3075 3054 2649 2487 46 0 33 chr20 6169175 6169479 -60498526 - AluY SINE Alu -17 294 1 795 264 115 72 chr20 6169479 6169599 -60498406 - L1MEd LINE L1 -3480 2649 2536 2249 111 0 9 chr20 6169599 6169914 -60498091 - AluSx SINE Alu 0 312 1 795 264 115 72 chr20 6169914 6170268 -60497737 - L1MEd LINE L1 -3593 2536 2115 798 292 79 32 chr20 6170577 6170883 -60497122 - L1MEd LINE L1 -4576 1734 1444 1951 159 3 0 chr20 6170883 6171185 -60496820 - AluJb SINE Alu -9 303 1 798 292 79 32 chr20 6171185 6171958 -60496047 - L1MEd LINE L1 -4866 1444 565 653 283 97 31 chr20 6172127 6172359 -60495646 - HAL1 LINE L1 -1285 1222 1007 13866 125 51 30 chr20 6172359 6172502 -60495503 + Tigger1 DNA MER2_type 5 143 -2275 1922 163 0 10 chr20 6172502 6172803 -60495202 - AluJb SINE Alu -14 298 1 13866 125 51 30 chr20 6172803 6174850 -60493155 + Tigger1 DNA MER2_type 143 2252 -166 294 50 0 0 chr20 6174850 6174890 -60493115 + (TG)n Simple_repeat Simple_repeat 2 41 0 13866 125 51 30 chr20 6174890 6175061 -60492944 + Tigger1 DNA MER2_type 2252 2418 0 653 283 97 31 chr20 6175061 6175252 -60492753 - HAL1 LINE L1 -1500 1007 771 1249 178 31 78 chr20 6175450 6175630 -60492375 - MER58B DNA MER1_type -2081 339 152 2394 84 0 3 chr20 6175630 6175929 -60492076 - AluSx SINE Alu -11 301 4 265 0 75 0 chr20 6175931 6175971 -60492034 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1965 132 0 24 chr20 6175974 6176262 -60491743 - AluSx SINE Alu -31 281 1 1249 178 31 78 chr20 6176262 6176367 -60491638 - MER58B DNA MER1_type -2271 149 61 278 220 180 20 chr20 6176532 6176632 -60491373 - HAL1 LINE L1 -2370 137 22 244 138 31 0 chr20 6176943 6177008 -60490997 + T-rich Low_complexity Low_complexity 4 70 0 761 220 0 0 chr20 6177188 6177320 -60490685 - MER58B DNA MER1_type -49 292 161 2207 102 20 0 chr20 6177906 6178200 -60489805 - AluSp SINE Alu -7 306 7 27 29 0 0 chr20 6178686 6178720 -60489285 + AT_rich Low_complexity Low_complexity 1 34 0 1927 141 17 3 chr20 6178989 6179279 -60488726 + AluJb SINE Alu 2 295 -17 772 182 0 0 chr20 6180913 6181045 -60486960 - FLAM_C SINE Alu 0 133 2 194 0 39 0 chr20 6181468 6181494 -60486511 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 2234 83 0 21 chr20 6181618 6181983 -60486022 - AluSq SINE Alu 0 359 1 1340 190 132 4 chr20 6182235 6182493 -60485512 - AluJb SINE Alu -21 291 1 203 310 81 35 chr20 6182545 6182632 -60485373 + MIR SINE MIR 19 109 -99 26 0 0 0 chr20 6183777 6183803 -60484202 + AT_rich Low_complexity Low_complexity 1 26 0 1261 194 0 104 chr20 6184168 6184357 -60483648 - AluY SINE Alu -11 300 160 2268 108 0 0 chr20 6184357 6184652 -60483353 - AluSx SINE Alu -17 295 1 1261 194 0 104 chr20 6184652 6184797 -60483208 - AluY SINE Alu -151 160 1 21 71 0 0 chr20 6185900 6185942 -60482063 + AT_rich Low_complexity Low_complexity 1 42 0 407 205 26 13 chr20 6187717 6187795 -60480210 - FRAM/FAM SINE Alu -92 84 6 390 21 0 0 chr20 6187805 6187852 -60480153 + (TG)n Simple_repeat Simple_repeat 2 48 0 208 269 15 30 chr20 6187905 6187972 -60480033 - MIR3 SINE MIR -24 184 119 1586 214 74 40 chr20 6188130 6188578 -60479427 + MLT1C LTR MaLR 3 465 -2 227 350 29 0 chr20 6190937 6191074 -60476931 - MIR SINE MIR -59 203 63 2267 101 3 0 chr20 6191187 6191485 -60476520 + AluSg SINE Alu 1 299 -11 484 237 75 94 chr20 6191490 6191674 -60476331 - MIR SINE MIR -1 261 82 1887 145 0 20 chr20 6191674 6191971 -60476034 + AluJo SINE Alu 1 291 -21 484 237 75 94 chr20 6191971 6192052 -60475953 - MIR SINE MIR -180 82 1 1847 157 7 13 chr20 6192171 6192476 -60475529 + AluJb SINE Alu 1 303 -9 639 182 107 58 chr20 6192763 6193026 -60474979 + MLT1J2 LTR MaLR 60 374 -72 1990 137 7 10 chr20 6193704 6194025 -60473980 + AluSx SINE Alu 1 312 0 1002 211 158 88 chr20 6194173 6194575 -60473430 - MLT1H LTR MaLR 0 549 102 1654 177 28 7 chr20 6194575 6194858 -60473147 + AluJo SINE Alu 1 289 -23 1002 211 158 88 chr20 6194858 6194968 -60473037 - MLT1H LTR MaLR -447 102 1 200 292 0 0 chr20 6195344 6195392 -60472613 + (TATG)n Simple_repeat Simple_repeat 4 51 0 289 242 194 0 chr20 6195842 6195964 -60472041 + Charlie4 DNA MER1_type 177 1774 -187 471 48 0 0 chr20 6195965 6196027 -60471978 + (CA)n Simple_repeat Simple_repeat 2 63 0 2080 124 0 20 chr20 6196052 6196350 -60471655 + AluSc SINE Alu 1 292 -17 246 261 0 15 chr20 6196354 6196419 -60471586 + Charlie4 DNA MER1_type 1898 1961 0 1069 256 80 6 chr20 6196629 6196992 -60471013 + L2 LINE L2 1890 2279 -1035 825 237 47 9 chr20 6196997 6197212 -60470793 + MIR SINE MIR 8 230 -32 205 309 18 0 chr20 6197882 6197937 -60470068 + L2 LINE L2 3134 3189 -83 389 311 24 6 chr20 6197939 6198042 -60469963 + (CAT)n Simple_repeat Simple_repeat 1 110 -57 2308 107 3 10 chr20 6198042 6198350 -60469655 - AluSq SINE Alu -7 306 1 389 311 24 6 chr20 6198350 6198410 -60469595 + (CAT)n Simple_repeat Simple_repeat 110 167 0 315 131 0 71 chr20 6198414 6198513 -60469492 + (CACCAT)n Simple_repeat Simple_repeat 6 97 0 272 248 43 60 chr20 6198535 6198652 -60469353 - MIR SINE MIR -27 235 121 345 293 47 26 chr20 6199669 6199860 -60468145 - MIR3 SINE MIR 0 208 14 461 243 155 0 chr20 6200347 6200495 -60467510 + MIR SINE MIR 3 173 -89 33 43 0 0 chr20 6203186 6203233 -60464772 + AT_rich Low_complexity Low_complexity 1 47 0 2455 109 11 22 chr20 6203244 6203603 -60464402 + THE1A LTR MaLR 1 355 0 320 133 19 133 chr20 6203652 6203757 -60464248 + L1ME4a LINE L1 5975 6067 -54 677 178 85 0 chr20 6204363 6204492 -60463513 + FLAM_C SINE Alu 1 140 -3 226 198 270 9 chr20 6205114 6205225 -60462780 - MIR SINE MIR -17 245 106 2194 118 0 16 chr20 6205281 6205585 -60462420 - AluSx SINE Alu -13 299 1 786 281 39 69 chr20 6206093 6206428 -60461577 - LTR16C LTR ERVL -5 486 162 181 302 177 10 chr20 6206621 6206717 -60461288 + L2 LINE L2 3199 3310 -3 384 270 48 48 chr20 6207079 6207205 -60460800 - MIR3 SINE MIR -1 207 82 261 374 37 0 chr20 6208480 6208587 -60459418 + L2 LINE L2 3151 3261 -11 2215 107 7 3 chr20 6208587 6208886 -60459119 + AluSq SINE Alu 1 300 -13 1889 178 93 137 chr20 6209164 6209349 -60458656 + L1ME3 LINE L1 5343 5534 -628 376 212 7 11 chr20 6209349 6209441 -60458564 - FLAM_A SINE Alu -11 122 59 1889 178 93 137 chr20 6209441 6209840 -60458165 + L1ME3 LINE L1 5534 5987 -175 880 225 117 57 chr20 6210090 6210476 -60457529 + MLT1I LTR MaLR 1 409 0 337 258 189 30 chr20 6210512 6210644 -60457361 - L2 LINE L2 0 3313 3161 37 0 0 0 chr20 6210656 6210693 -60457312 + AT_rich Low_complexity Low_complexity 1 37 0 447 261 106 29 chr20 6210902 6211109 -60456896 - L2 LINE L2 -605 2709 2487 777 178 66 116 chr20 6211109 6211275 -60456730 + MLT1D LTR MaLR 1 153 -352 2453 79 3 9 chr20 6211275 6211590 -60456415 - AluSp SINE Alu 0 313 1 777 178 66 116 chr20 6211590 6211665 -60456340 + MLT1D LTR MaLR 153 230 -275 1443 153 96 0 chr20 6211668 6211897 -60456108 + AluJb SINE Alu 1 251 -61 631 278 192 12 chr20 6211912 6212397 -60455608 - L2 LINE L2 -1010 2304 1733 2166 249 18 30 chr20 6212425 6212488 -60455517 - MLT1H1 LTR MaLR 0 555 493 3622 152 25 17 chr20 6212488 6212692 -60455313 - MER6A DNA MER2_type -260 605 404 2253 109 0 3 chr20 6212692 6212994 -60455011 + AluSg SINE Alu 1 301 -9 3622 152 25 17 chr20 6212994 6213389 -60454616 - MER6A DNA MER2_type -461 404 1 2166 249 18 30 chr20 6213389 6213825 -60454180 - MLT1H1 LTR MaLR -62 493 61 2220 100 7 3 chr20 6213825 6214126 -60453879 - AluSx SINE Alu -10 302 1 2166 249 18 30 chr20 6214126 6214187 -60453818 - MLT1H1 LTR MaLR -494 61 1 191 286 36 45 chr20 6214194 6214306 -60453699 - L2 LINE L2 -1635 1679 1569 444 266 100 57 chr20 6214974 6215057 -60452948 + MARNA DNA Mariner 129 207 -379 225 0 0 0 chr20 6215057 6215082 -60452923 + (CA)n Simple_repeat Simple_repeat 1 25 0 444 266 100 57 chr20 6215082 6215299 -60452706 + MARNA DNA Mariner 207 442 -144 302 221 53 32 chr20 6215540 6215635 -60452370 - MLT1L LTR MaLR -2 613 517 * 589 235 126 75 chr20 6215633 6215961 -60452044 - MLT1L LTR MaLR -238 288 1 1855 166 3 3 chr20 6216035 6216336 -60451669 + AluJb SINE Alu 1 301 -11 329 248 64 0 chr20 6217039 6217148 -60450857 + MIR SINE MIR 12 127 -135 636 187 216 18 chr20 6217151 6217322 -60450683 - MER63A DNA MER1_type -5 205 1 1993 107 0 0 chr20 6217783 6218035 -60449970 - AluSp SINE Alu -61 252 1 350 195 3 111 chr20 6218213 6218340 -60449665 - MLT1F1 LTR MaLR 0 567 434 1821 203 47 18 chr20 6218788 6219069 -60448936 - MLT1C LTR MaLR 0 467 167 2058 125 3 7 chr20 6219069 6219364 -60448641 - AluSq SINE Alu -19 294 1 1821 203 47 18 chr20 6219364 6219531 -60448474 - MLT1C LTR MaLR -300 167 6 442 177 0 0 chr20 6219754 6219833 -60448172 + MER96 DNA MER1_type? 97 175 0 220 118 333 0 chr20 6219834 6219885 -60448120 - MER5A DNA MER1_type -113 76 9 254 96 0 19 chr20 6220359 6220411 -60447594 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 358 221 0 0 chr20 6220443 6220511 -60447494 - FRAM SINE Alu -24 142 75 911 128 16 0 chr20 6221005 6221130 -60446875 - FLAM_C SINE Alu -16 127 1 210 23 45 45 chr20 6221197 6221241 -60446764 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 2224 80 7 0 chr20 6221248 6221524 -60446481 - AluSp SINE Alu -35 278 1 1836 145 38 7 chr20 6221852 6222142 -60445863 - AluJo SINE Alu -13 299 1 2393 77 3 16 chr20 6222310 6222621 -60445384 + AluSp SINE Alu 7 313 0 184 217 167 0 chr20 6222859 6222919 -60445086 + MIR SINE MIR 71 140 -68 198 0 0 0 chr20 6223072 6223094 -60444911 + (TG)n Simple_repeat Simple_repeat 2 23 0 2273 108 7 3 chr20 6226221 6226528 -60441477 - AluSx SINE Alu -4 308 1 860 196 17 6 chr20 6226646 6226819 -60441186 - MER5B DNA MER1_type -3 175 1 1216 138 60 112 chr20 6227040 6227308 -60440697 - AluJo SINE Alu -29 283 30 637 276 199 8 chr20 6228383 6228849 -60439156 - L2 LINE L2 -4 3309 2749 773 206 0 0 chr20 6228867 6228993 -60439012 - FLAM_C SINE Alu -14 129 4 2790 241 65 33 chr20 6228995 6229553 -60438452 - L2 LINE L2 -567 2747 2143 1369 197 88 7 chr20 6229553 6229837 -60438168 + AluJo SINE Alu 1 307 -5 2790 241 65 33 chr20 6229837 6230266 -60437739 - L2 LINE L2 -1171 2143 1729 2038 138 6 13 chr20 6231196 6231508 -60436497 - AluSx SINE Alu -2 310 1 720 144 0 0 chr20 6232095 6232206 -60435799 + FLAM_C SINE Alu 1 111 -32 201 39 0 0 chr20 6232242 6232268 -60435737 + (A)n Simple_repeat Simple_repeat 1 26 0 2009 158 3 0 chr20 6233244 6233541 -60434464 - AluSx SINE Alu -14 298 1 1934 134 17 3 chr20 6234117 6234407 -60433598 + AluSx SINE Alu 1 294 -18 2321 88 0 10 chr20 6234409 6234704 -60433301 + AluSc SINE Alu 3 294 -15 2236 112 146 8 chr20 6235101 6235477 -60432528 + MSTA LTR MaLR 1 428 0 568 272 68 19 chr20 6235481 6235687 -60432318 + MLT1H LTR MaLR 36 251 -298 2185 114 0 10 chr20 6235854 6236151 -60431854 - AluSx SINE Alu -10 302 9 2298 94 17 0 chr20 6237175 6237472 -60430533 - AluSx SINE Alu -10 302 1 266 315 43 27 chr20 6237834 6238018 -60429987 + MIR SINE MIR 44 230 -32 2325 89 0 0 chr20 6238630 6238921 -60429084 - AluSc SINE Alu -18 291 1 1039 189 82 0 chr20 6239048 6239244 -60428761 + AluJo SINE Alu 28 239 -73 28 0 0 0 chr20 6239272 6239300 -60428705 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr20 6239332 6239362 -60428643 + AT_rich Low_complexity Low_complexity 1 30 0 2189 125 3 0 chr20 6239431 6239736 -60428269 + AluSx SINE Alu 2 307 -5 2164 125 0 7 chr20 6239773 6240078 -60427927 - AluSx SINE Alu -7 305 3 1284 101 0 28 chr20 6240486 6240665 -60427340 - AluSg/x SINE Alu -13 299 126 2053 144 7 0 chr20 6240811 6241103 -60426902 + AluJb SINE Alu 1 294 -18 470 321 46 25 chr20 6241129 6241366 -60426639 - L1MEd LINE L1 -5635 484 243 28 48 0 0 chr20 6241592 6241634 -60426371 + AT_rich Low_complexity Low_complexity 1 42 0 195 302 52 42 chr20 6241648 6241744 -60426261 - MIR3 SINE MIR -28 180 84 201 305 0 0 chr20 6241775 6241834 -60426171 + CT-rich Low_complexity Low_complexity 1 59 0 2270 126 3 0 chr20 6242223 6242533 -60425472 + AluSx SINE Alu 1 311 -1 665 254 57 10 chr20 6243155 6243348 -60424657 - MIR SINE MIR -12 250 49 621 179 0 9 chr20 6243598 6243710 -60424295 - MER3 DNA MER1_type 0 209 99 264 233 105 38 chr20 6243775 6243908 -60424097 + L1ME3A LINE L1 6029 6170 0 1621 163 4 0 chr20 6244792 6245037 -60422968 + AluJb SINE Alu 1 246 -66 1976 148 7 10 chr20 6246352 6246662 -60421343 - AluJb SINE Alu -3 309 1 524 263 60 50 chr20 6246823 6247104 -60420901 + L1MB4 LINE L1 4562 4845 -1301 45 0 0 0 chr20 6247104 6247149 -60420856 + AT_rich Low_complexity Low_complexity 1 45 0 3313 172 51 22 chr20 6247298 6247669 -60420336 + L1MB4 LINE L1 5428 5826 -354 2206 107 7 7 chr20 6247669 6247968 -60420037 + AluSq SINE Alu 1 299 -14 3313 172 51 22 chr20 6247968 6248224 -60419781 + L1MB4 LINE L1 5826 6073 -107 1354 181 61 34 chr20 6248273 6248552 -60419453 + AluJo SINE Alu 12 301 -11 693 114 70 0 chr20 6248552 6248666 -60419339 + L1MB4 LINE L1 6059 6180 0 1354 181 61 34 chr20 6248666 6248679 -60419326 + AluJo SINE Alu 301 312 0 2431 176 28 24 chr20 6248683 6249177 -60418828 + L1MB7 LINE L1 5681 6176 -8 28 71 0 0 chr20 6249393 6249449 -60418556 + AT_rich Low_complexity Low_complexity 1 56 0 479 279 60 50 chr20 6249451 6249749 -60418256 + L1ME LINE L1 5258 5558 -604 2160 118 0 10 chr20 6250198 6250504 -60417501 - AluSx SINE Alu -9 303 1 328 82 0 0 chr20 6250528 6250577 -60417428 - L1MB3 LINE L1 -4 6179 6131 870 127 0 0 chr20 6250587 6250713 -60417292 - FRAM SINE Alu -23 153 28 2433 97 0 0 chr20 6250947 6251255 -60416750 + AluSx SINE Alu 5 312 0 1009 254 140 29 chr20 6251733 6252146 -60415859 - L1MC4a LINE L1 -1888 5920 5462 309 277 0 27 chr20 6252156 6252268 -60415737 - L1MC4a LINE L1 -2444 5364 5256 2192 128 0 0 chr20 6252421 6252719 -60415286 - AluSq SINE Alu -15 298 1 913 254 110 18 chr20 6253861 6254262 -60413743 + Charlie4a DNA MER1_type 3 440 -68 208 300 0 0 chr20 6254279 6254329 -60413676 + L2 LINE L2 3246 3295 -18 207 0 0 0 chr20 6254598 6254621 -60413384 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2342 117 0 0 chr20 6255464 6255773 -60412232 + AluSg SINE Alu 1 309 -1 1281 133 27 106 chr20 6256305 6256402 -60411603 + MER46A DNA MER2_type 1 104 -2627 1980 138 0 0 chr20 6256402 6256714 -60411291 - AluSx SINE Alu 0 312 1 1281 133 27 106 chr20 6256714 6256871 -60411134 + MER46A DNA MER2_type 104 236 0 2144 117 13 13 chr20 6257076 6257375 -60410630 + AluSx SINE Alu 1 299 -13 500 185 229 13 chr20 6257480 6257637 -60410368 + MER3 DNA MER1_type 6 196 -13 2351 98 0 7 chr20 6258166 6258472 -60409533 + AluSp SINE Alu 1 304 -9 731 183 0 0 chr20 6259193 6259308 -60408697 + FLAM_A SINE Alu 1 115 -18 207 0 0 0 chr20 6259311 6259334 -60408671 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1170 142 0 0 chr20 6259484 6259653 -60408352 - AluSg/x SINE Alu -11 301 133 2271 131 0 0 chr20 6259898 6260210 -60407795 + AluSx SINE Alu 1 312 0 1812 166 3 41 chr20 6260405 6260724 -60407281 - AluJb SINE Alu -5 307 1 21 0 0 0 chr20 6261176 6261197 -60406808 + AT_rich Low_complexity Low_complexity 1 21 0 258 217 78 54 chr20 6261416 6261545 -60406460 - L1MC5 LINE L1 -46 7915 7784 2395 92 57 20 chr20 6261558 6261907 -60406098 + THE1B LTR MaLR 1 362 -2 787 231 166 21 chr20 6262065 6262452 -60405553 + LTR16C LTR ERVL 19 486 -5 194 326 163 0 chr20 6263207 6263299 -60404706 - L2 LINE L2 0 3272 3166 624 211 58 63 chr20 6263383 6263606 -60404399 + L2 LINE L2 3092 3313 0 939 92 7 21 chr20 6264781 6264923 -60403082 + L1PA7 LINE L1 6008 6147 -7 222 177 16 16 chr20 6264930 6264992 -60403013 + A-rich Low_complexity Low_complexity 2 63 0 2090 135 3 3 chr20 6264995 6265291 -60402714 + AluSq SINE Alu 1 296 -17 2222 80 0 15 chr20 6265826 6265984 -60402021 - AluSx SINE Alu -21 291 137 2251 87 0 0 chr20 6265984 6266259 -60401746 - AluSg SINE Alu -14 296 22 2222 80 0 15 chr20 6266259 6266374 -60401631 - AluSx SINE Alu -175 137 22 1175 67 0 0 chr20 6266375 6266510 -60401495 - AluSq/x SINE Alu -178 135 1 1674 219 145 46 chr20 6266510 6267099 -60400906 + L1ME3A LINE L1 5514 6160 -10 430 240 62 76 chr20 6267108 6267333 -60400672 + MER113 DNA MER1_type? 135 356 -165 2116 123 0 0 chr20 6267495 6267796 -60400209 - AluSx SINE Alu -11 301 1 237 261 0 15 chr20 6268509 6268574 -60399431 - L1ME2 LINE L1 -9 6155 6092 219 178 137 14 chr20 6269328 6269401 -60398604 - MER5A DNA MER1_type -80 109 28 2416 92 3 0 chr20 6269664 6269968 -60398037 - AluSg SINE Alu -5 305 1 441 252 59 15 chr20 6270202 6270337 -60397668 - MIR3 SINE MIR -63 145 5 244 286 10 61 chr20 6272267 6272365 -60395640 - L2 LINE L2 -1 3271 3179 345 24 0 0 chr20 6272799 6272841 -60395164 + (CA)n Simple_repeat Simple_repeat 1 42 0 1847 102 91 11 chr20 6272845 6273110 -60394895 - AluSc SINE Alu -23 286 1 398 194 14 0 chr20 6273332 6273404 -60394601 - L1ME3A LINE L1 -26 6144 6072 816 226 11 12 chr20 6273485 6273704 -60394301 - L1ME3A LINE L1 -173 5997 5835 1252 163 206 0 chr20 6273711 6273963 -60394042 - AluJo SINE Alu -8 304 1 653 208 15 8 chr20 6274681 6274811 -60393194 + AluJ SINE Alu 3 133 -179 722 40 101 0 chr20 6274823 6274922 -60393083 + L1PA11 LINE L1 6064 6172 -2 1260 134 0 21 chr20 6274927 6275113 -60392892 + AluJ SINE Alu 122 303 -9 250 257 30 40 chr20 6275986 6276087 -60391918 - L1MC4a LINE L1 -1875 5933 5834 519 281 68 51 chr20 6276091 6276326 -60391679 + LTR67 LTR ERVL 23 261 -296 31 0 0 0 chr20 6277242 6277273 -60390732 + AT_rich Low_complexity Low_complexity 1 31 0 353 250 29 10 chr20 6277489 6277593 -60390412 + MLT1H LTR MaLR 50 155 -394 1174 210 36 0 chr20 6277690 6277942 -60390063 + L1MC4a LINE L1 6737 6997 -811 246 244 93 23 chr20 6277983 6278069 -60389936 - MIR SINE MIR -148 114 23 764 254 98 10 chr20 6278119 6278312 -60389693 + MER82 DNA MER2_type 444 653 0 258 219 29 48 chr20 6278314 6278419 -60389586 + HAL1 LINE L1 2333 2435 -72 195 100 0 0 chr20 6278828 6278858 -60389147 + (TGGGGG)n Simple_repeat Simple_repeat 4 33 0 693 252 79 4 chr20 6278927 6279136 -60388869 - MIR SINE MIR -19 243 22 261 0 0 0 chr20 6279673 6279702 -60388303 + (T)n Simple_repeat Simple_repeat 1 29 0 589 267 19 0 chr20 6279874 6280035 -60387970 - L1MC4a LINE L1 -436 5685 5522 1361 190 41 14 chr20 6280511 6280801 -60387204 + MLT1C LTR MaLR 1 298 -169 1464 198 100 18 chr20 6280816 6281026 -60386979 - MLT1A1 LTR MaLR 0 365 117 2326 94 3 0 chr20 6281026 6281323 -60386682 - AluSx SINE Alu -14 298 1 1464 198 100 18 chr20 6281323 6281441 -60386564 - MLT1A1 LTR MaLR -248 117 10 409 232 120 16 chr20 6281455 6281580 -60386425 + MLT1C LTR MaLR 318 455 -12 1158 273 54 31 chr20 6282158 6282484 -60385521 + LTR16C LTR ERVL 77 415 -76 2346 117 24 24 chr20 6282484 6282859 -60385146 + THE1C LTR MaLR 1 375 0 1158 273 54 31 chr20 6282859 6282920 -60385085 + LTR16C LTR ERVL 415 473 -18 3393 165 59 50 chr20 6283122 6283796 -60384209 + MER54B LTR ERVL 1 680 -113 563 283 165 31 chr20 6284008 6284330 -60383675 - LTR16A1 LTR ERVL 0 457 93 2481 117 150 91 chr20 6284504 6284775 -60383230 - L1MA5A LINE L1 -5 6292 6038 516 101 13 0 chr20 6284775 6284854 -60383151 + MADE1 DNA Mariner 1 80 0 2481 117 150 91 chr20 6284854 6285156 -60382849 - L1MA5A LINE L1 -259 6038 5685 227 259 0 0 chr20 6285334 6285388 -60382617 - L2 LINE L2 -3 3269 3216 279 377 7 7 chr20 6285530 6285676 -60382329 + (TCCA)n Simple_repeat Simple_repeat 1 146 0 352 244 19 90 chr20 6285726 6285882 -60382123 - L2 LINE L2 0 3313 3169 234 321 110 9 chr20 6286064 6286173 -60381832 + L2 LINE L2 3147 3266 -6 1620 118 24 115 chr20 6286258 6286596 -60381409 + AluYb8 SINE Alu 1 307 -11 1862 169 0 7 chr20 6286982 6287289 -60380716 + AluJb SINE Alu 1 305 -7 236 278 58 58 chr20 6287762 6287967 -60380038 - L1ME4a LINE L1 -83 6038 5834 3368 73 11 5 chr20 6288032 6288473 -60379532 - L1PA8 LINE L1 -1 6171 5728 529 260 18 96 chr20 6288826 6288993 -60379012 - MIR SINE MIR -25 237 89 1487 104 0 0 chr20 6288993 6289204 -60378801 + L1MA2 LINE L1 6094 6304 0 529 260 18 96 chr20 6289204 6289255 -60378750 - MIR SINE MIR -173 89 36 768 179 164 24 chr20 6289534 6289741 -60378264 - MLT1K LTR MaLR -23 565 330 271 289 127 42 chr20 6289806 6289948 -60378057 - MLT1K LTR MaLR -419 169 16 363 182 265 15 chr20 6289972 6290104 -60377901 + MER5A DNA MER1_type 18 182 -7 566 261 111 56 chr20 6290261 6290495 -60377510 + MER115 DNA AcHobo 1 247 -446 1865 151 14 0 chr20 6291463 6291754 -60376251 - AluJb SINE Alu -11 301 7 1324 182 62 140 chr20 6291828 6291992 -60376013 + Charlie4a DNA MER1_type 46 221 -1740 6449 85 30 0 chr20 6291992 6292368 -60375637 - L1PA13 LINE L1 -11 6152 5789 2538 50 0 7 chr20 6292368 6292668 -60375337 - AluY SINE Alu -11 300 3 6449 85 30 0 chr20 6292668 6293741 -60374264 - L1PA13 LINE L1 -374 5789 4697 1324 182 62 140 chr20 6293741 6294035 -60373970 + Charlie4a DNA MER1_type 221 464 -1497 1975 186 80 57 chr20 6294035 6294525 -60373480 + MLT1D LTR MaLR 5 505 0 1324 182 62 140 chr20 6294525 6294565 -60373440 + Charlie4a DNA MER1_type 464 506 -2 1658 229 20 0 chr20 6294639 6294980 -60373025 - MLT1F1 LTR MaLR -8 559 212 407 133 0 0 chr20 6294975 6295035 -60372970 - MLT1F1 LTR MaLR -507 60 1 * 1080 166 0 83 chr20 6295288 6295501 -60372504 - L1MC3 LINE L1 0 7785 7593 1983 134 53 0 chr20 6295501 6295785 -60372220 - AluSx SINE Alu -13 299 1 1080 166 0 83 chr20 6295785 6295812 -60372193 - L1MC3 LINE L1 -192 7593 7565 375 264 112 0 chr20 6295908 6296033 -60371972 + MIR SINE MIR 5 143 -119 181 269 70 80 chr20 6296248 6296449 -60371556 - L2 LINE L2 -194 3078 2880 4403 169 56 8 chr20 6296459 6297318 -60370687 + MER54A LTR ERVL 2 901 0 2143 137 0 13 chr20 6298029 6298344 -60369661 - AluSq SINE Alu -2 311 1 2075 206 45 13 chr20 6299139 6299367 -60368638 - MER65C LTR ERV1 0 461 242 2722 143 2 25 chr20 6299367 6299809 -60368196 - MSTB1 LTR MaLR 0 432 1 2075 206 45 13 chr20 6299809 6300027 -60367978 - MER65C LTR ERV1 -219 242 1 14550 218 28 17 chr20 6300063 6301464 -60366541 - L1PA16 LINE L1 0 7604 6220 1807 154 57 46 chr20 6301464 6301835 -60366170 - THE1C LTR MaLR 0 375 1 14550 218 28 17 chr20 6301835 6304215 -60363790 - L1PA16 LINE L1 -1384 6220 3802 2274 112 0 7 chr20 6304215 6304520 -60363485 - AluSq SINE Alu -10 303 1 14550 218 28 17 chr20 6304520 6306138 -60361867 - L1PA16 LINE L1 -3802 3802 2204 484 293 28 22 chr20 6306405 6306586 -60361419 - L1PA16 LINE L1 -5276 2298 2117 1387 310 40 28 chr20 6306613 6307190 -60360815 - L1PA16 LINE L1 -6203 1371 788 1710 126 20 0 chr20 6307950 6308205 -60359800 + Tigger5 DNA MER2_type 2063 2322 -1 246 128 0 0 chr20 6308208 6308247 -60359758 + (TG)n Simple_repeat Simple_repeat 2 40 0 2176 206 37 57 chr20 6308253 6308460 -60359545 - L1MCb LINE L1 -4851 1194 984 1868 164 0 3 chr20 6308460 6308752 -60359253 + AluSx SINE Alu 1 291 -21 2176 206 37 57 chr20 6308752 6309519 -60358486 - L1MCb LINE L1 -5061 984 571 1286 265 46 88 chr20 6309576 6310203 -60357802 - L1MCb LINE L1 -5444 601 1 821 60 30 15 chr20 6310639 6310772 -60357233 + (TTTC)n Simple_repeat Simple_repeat 4 138 0 360 0 0 0 chr20 6310775 6310815 -60357190 + (CA)n Simple_repeat Simple_repeat 2 41 0 214 255 92 71 chr20 6312072 6312170 -60355835 - MIR SINE MIR -73 189 90 472 304 88 21 chr20 6313997 6314191 -60353814 - MIR SINE MIR -45 217 11 1884 142 14 3 chr20 6314560 6314855 -60353150 + AluSx SINE Alu 14 311 -1 1931 85 0 12 chr20 6315058 6315306 -60352699 - AluY SINE Alu -19 292 48 308 301 88 16 chr20 6315387 6315580 -60352425 - L1MB8 LINE L1 -279 5899 5693 1836 82 9 0 chr20 6315593 6315825 -60352180 - L1PA8 LINE L1 0 6172 5939 1269 270 99 13 chr20 6315880 6316273 -60351732 + LTR16B LTR ERVL 34 460 -4 31 0 0 0 chr20 6316385 6316416 -60351589 + AT_rich Low_complexity Low_complexity 1 31 0 537 215 25 0 chr20 6316416 6316537 -60351468 - L1ME3A LINE L1 -20 6150 6027 1503 191 109 56 chr20 6316562 6317019 -60350986 - MER66A LTR ERV1 0 478 97 1320 181 112 67 chr20 6317073 6317449 -60350556 - L1ME3A LINE L1 -157 6013 5621 963 168 0 19 chr20 6317456 6317617 -60350388 + FRAM SINE Alu 1 152 -24 901 222 48 77 chr20 6317684 6317995 -60350010 - LTR41 LTR ERVL -7 766 465 927 172 21 47 chr20 6318142 6318334 -60349671 - LTR41 LTR ERVL -586 187 1 2922 3 0 0 chr20 6318861 6319172 -60348833 + AluYa5 SINE Alu 1 311 0 327 141 14 84 chr20 6319662 6319687 -60348318 - LTR67 LTR ERVL 0 557 532 1621 230 100 66 chr20 6319687 6320218 -60347787 - MLT1H LTR MaLR 0 549 1 327 141 14 84 chr20 6320218 6320263 -60347742 - LTR67 LTR ERVL -25 532 492 1209 240 117 80 chr20 6320263 6320278 -60347727 - HAL1 LINE L1 -154 2353 2340 1637 121 4 0 chr20 6320278 6320509 -60347496 - AluSg/x SINE Alu 0 312 81 1209 240 117 80 chr20 6320509 6320740 -60347265 - HAL1 LINE L1 -167 2340 2119 2875 150 26 24 chr20 6320740 6321206 -60346799 + MLT1C LTR MaLR 1 467 0 1209 240 117 80 chr20 6321206 6321679 -60346326 - HAL1 LINE L1 -388 2119 1607 1436 191 83 81 chr20 6321679 6322146 -60345859 - MLT1F1 LTR MaLR -5 562 95 1002 199 129 48 chr20 6322163 6322402 -60345603 - MLT1A2 LTR MaLR -15 359 84 1986 153 0 3 chr20 6322402 6322709 -60345296 - AluSx SINE Alu -6 306 1 1002 199 129 48 chr20 6322709 6322801 -60345204 - MLT1A2 LTR MaLR -290 84 1 336 282 0 21 chr20 6322805 6322901 -60345104 - MLT1F1 LTR MaLR -466 76 1 1527 253 150 82 chr20 6322930 6323967 -60344038 - HAL1 LINE L1 -968 1539 432 276 247 68 0 chr20 6323971 6324044 -60343961 - HAL1 LINE L1 -2376 131 54 203 286 193 8 chr20 6324904 6325023 -60342982 - MER5B DNA MER1_type -35 143 3 198 238 48 16 chr20 6325326 6325389 -60342616 - MER5A DNA MER1_type -16 173 109 * 610 221 22 7 chr20 6325334 6325470 -60342535 + MER5B DNA MER1_type 25 162 -16 3713 72 5 5 chr20 6325692 6326136 -60341869 - MLT2A1 LTR ERVL 0 444 1 262 300 12 0 chr20 6327530 6327610 -60340395 - L2 LINE L2 0 3272 3192 378 0 0 0 chr20 6327691 6327733 -60340272 + (TC)n Simple_repeat Simple_repeat 2 43 0 * 486 0 0 0 chr20 6327732 6327786 -60340219 + (TA)n Simple_repeat Simple_repeat 1 54 0 967 270 98 55 chr20 6328763 6329200 -60338805 + LTR16A1 LTR ERVL 1 456 -1 933 276 87 14 chr20 6329253 6329608 -60338397 + MLT1L LTR MaLR 14 394 -221 266 281 123 9 chr20 6329637 6329751 -60338254 + MLT1L LTR MaLR 465 591 -24 180 0 0 0 chr20 6330262 6330282 -60337723 + (T)n Simple_repeat Simple_repeat 1 20 0 668 300 76 38 chr20 6330486 6330829 -60337176 + MLT1I LTR MaLR 53 408 -1 1097 315 54 10 chr20 6331302 6331708 -60336297 - LTR16C LTR ERVL 0 491 68 3235 159 27 68 chr20 6332738 6333589 -60334416 - LTR1 LTR ERV1 0 785 9 814 273 27 12 chr20 6333751 6334007 -60333998 - MIR SINE MIR -2 260 1 907 199 11 0 chr20 6334026 6334207 -60333798 + MER5A DNA MER1_type 1 183 -6 206 281 31 16 chr20 6335077 6335141 -60332864 - MER5A DNA MER1_type -1 188 124 354 176 59 209 chr20 6335190 6335308 -60332697 - MER5B DNA MER1_type -3 175 94 1533 38 0 5 chr20 6335308 6335493 -60332512 - AluY SINE Alu -5 306 123 354 176 59 209 chr20 6335493 6335561 -60332444 - MER5B DNA MER1_type -84 94 17 684 242 81 10 chr20 6335653 6335851 -60332154 + MIR SINE MIR 8 219 -43 1830 189 147 76 chr20 6335851 6336380 -60331625 - MLT1F1 LTR MaLR 0 567 1 592 215 0 0 chr20 6336511 6336618 -60331387 + MER3 DNA MER1_type 10 116 -93 775 117 0 42 chr20 6336654 6336774 -60331231 - AluSg/x SINE Alu -7 303 189 308 177 25 38 chr20 6336781 6336860 -60331145 + MER3 DNA MER1_type 132 209 0 235 233 41 14 chr20 6336799 6336872 -60331133 - MER3 DNA MER1_type -99 110 36 * 539 256 186 6 chr20 6336872 6337028 -60330977 + MER5A DNA MER1_type 6 189 0 232 254 45 0 chr20 6337180 6337247 -60330758 + L2 LINE L2 2981 3050 -222 295 287 115 8 chr20 6337430 6337552 -60330453 - MER46C DNA MER2_type -62 276 142 27191 28 1 0 chr20 6337807 6341631 -60326374 + L1PA2 LINE L1 2323 6155 0 21 0 0 0 chr20 6341982 6342003 -60326002 + AT_rich Low_complexity Low_complexity 1 21 0 1988 123 3 36 chr20 6342432 6342740 -60325265 - AluSx SINE Alu -14 298 1 291 381 42 0 chr20 6342995 6343163 -60324842 + L2 LINE L2 2217 2391 -923 1063 272 98 34 chr20 6343275 6344192 -60323813 - L1ME LINE L1 -577 5585 4616 261 308 10 0 chr20 6344283 6344387 -60323618 - L1ME LINE L1 -1810 4336 4232 2335 204 34 28 chr20 6344397 6344896 -60323109 + MLT1F1 LTR MaLR 1 502 -65 501 244 5 67 chr20 6344915 6345108 -60322897 - HAL1 LINE L1 -348 2159 1979 5681 174 17 15 chr20 6345283 6346534 -60321471 - L1MA9 LINE L1 -7 6541 5286 2382 88 0 23 chr20 6346534 6346840 -60321165 - AluSq SINE Alu -14 299 1 5681 174 17 15 chr20 6346840 6347212 -60320793 - L1MA9 LINE L1 -1262 5286 4916 1315 136 45 45 chr20 6347212 6347455 -60320550 - MSTB LTR MaLR 0 426 184 185 299 51 56 chr20 6347945 6348142 -60319863 - L3b LINE CR1 -243 1340 1145 1163 164 21 0 chr20 6351390 6351579 -60316426 - MSTB LTR MaLR -229 197 5 10337 225 63 39 chr20 6351583 6352561 -60315444 - L1MA9 LINE L1 -1462 4920 3967 186 43 0 0 chr20 6352561 6352584 -60315421 + (TTG)n Simple_repeat Simple_repeat 2 24 0 10337 225 63 39 chr20 6352584 6354424 -60313581 - L1MA9 LINE L1 -2415 3967 2173 2264 130 51 5 chr20 6354424 6354794 -60313211 - L1MA5 LINE L1 -5 6295 5909 10337 225 63 39 chr20 6354794 6354824 -60313181 - L1MA9 LINE L1 -4209 2173 2145 2619 62 0 0 chr20 6354824 6355133 -60312872 - AluY SINE Alu -2 309 1 10337 225 63 39 chr20 6355133 6356367 -60311638 - L1MA9 LINE L1 -4237 2145 814 826 342 39 24 chr20 6357072 6357484 -60310521 - L1MA9 LINE L1 -5719 594 177 300 200 0 0 chr20 6357488 6357548 -60310457 + MLT1F1 LTR MaLR 500 559 -8 683 194 8 21 chr20 6357603 6357851 -60310154 + CT-rich Low_complexity Low_complexity 1 244 0 2235 109 7 0 chr20 6358210 6358513 -60309492 + AluSq SINE Alu 1 305 -8 341 229 60 0 chr20 6358563 6358646 -60309359 + MLT1I LTR MaLR 314 401 -8 2082 103 27 3 chr20 6358877 6359169 -60308836 - AluSx SINE Alu -13 299 1 23 33 0 0 chr20 6359170 6359200 -60308805 + AT_rich Low_complexity Low_complexity 1 30 0 1130 113 0 0 chr20 6359445 6359596 -60308409 + AluSp SINE Alu 139 289 -24 880 155 0 8 chr20 6359749 6359878 -60308127 + FLAM_A SINE Alu 1 128 -5 601 151 0 11 chr20 6360293 6360386 -60307619 - AluJb SINE Alu -12 300 209 934 226 182 78 chr20 6360550 6361089 -60306916 - MLT1F1 LTR MaLR 0 595 1 3221 231 57 12 chr20 6361931 6363047 -60304958 - L1MDb LINE L1 -4606 1800 658 240 297 31 0 chr20 6363445 6363509 -60304496 + C-rich Low_complexity Low_complexity 1 66 0 254 114 0 0 chr20 6363764 6363799 -60304206 - Alu SINE Alu -264 35 1 182 250 0 18 chr20 6363800 6363856 -60304149 - MIR SINE MIR -60 202 148 2123 101 29 0 chr20 6363871 6364149 -60303856 + AluSx SINE Alu 11 296 -16 2198 114 3 3 chr20 6364584 6364882 -60303123 + AluSc SINE Alu 1 298 -11 2253 96 3 0 chr20 6364915 6365207 -60302798 + AluSx SINE Alu 1 293 -19 2216 130 3 0 chr20 6365576 6365884 -60302121 - AluSx SINE Alu -3 309 1 2170 134 0 3 chr20 6366273 6366586 -60301419 - AluSx SINE Alu 0 312 1 339 318 51 51 chr20 6366602 6366778 -60301227 + HAL1 LINE L1 2309 2484 -23 1716 178 11 3 chr20 6366876 6367162 -60300843 + AluJo SINE Alu 1 288 -24 2067 134 3 0 chr20 6367463 6367753 -60300252 - AluSx SINE Alu -21 291 1 23 0 0 0 chr20 6368166 6368189 -60299816 + AT_rich Low_complexity Low_complexity 1 23 0 185 313 136 17 chr20 6368597 6368773 -60299232 + MIR3 SINE MIR 6 202 -6 414 0 0 0 chr20 6368869 6368915 -60299090 + (CA)n Simple_repeat Simple_repeat 1 46 0 244 373 24 48 chr20 6369350 6369476 -60298529 - MIR SINE MIR -132 130 8 350 317 150 14 chr20 6370053 6370235 -60297770 - MIR SINE MIR -5 257 49 560 224 29 0 chr20 6370582 6370756 -60297249 + CT-rich Low_complexity Low_complexity 1 179 0 226 161 18 18 chr20 6370773 6370829 -60297176 + CT-rich Low_complexity Low_complexity 4 59 0 529 279 60 71 chr20 6370915 6371703 -60296302 - L1M4 LINE L1 -2018 4128 3350 357 277 117 49 chr20 6371818 6371936 -60296069 - L1M4 LINE L1 -2989 3157 3048 2998 116 12 0 chr20 6371936 6372359 -60295646 - MSTA LTR MaLR 0 428 1 357 277 117 49 chr20 6372359 6372727 -60295278 - L1M4 LINE L1 -3098 3048 2638 5637 206 2 3 chr20 6372971 6374240 -60293765 + L1 LINE L1 3868 5135 -1011 1937 186 53 3 chr20 6374696 6375073 -60292932 + MER54B LTR ERVL 103 498 -295 225 83 0 0 chr20 6375075 6375111 -60292894 + (CA)n Simple_repeat Simple_repeat 2 37 0 1033 269 44 16 chr20 6375662 6376090 -60291915 - L1MC3 LINE L1 -1639 6382 5943 258 272 126 49 chr20 6376150 6376620 -60291385 - L1MC3 LINE L1 -1567 4815 4310 6526 26 0 0 chr20 6376672 6377464 -60290541 - L1PA3 LINE L1 -3 6152 5361 1072 21 28 0 chr20 6377467 6377609 -60290396 + L1PA3 LINE L1 5213 5358 -788 584 270 152 46 chr20 6377684 6378309 -60289696 - HAL1 LINE L1 -1816 691 1 450 268 95 30 chr20 6378374 6378657 -60289348 - L1MC3 LINE L1 -3917 2467 2169 1642 102 9 4 chr20 6378662 6379432 -60288573 + L1PB1 LINE L1 5285 6151 0 2130 104 0 46 chr20 6379562 6379888 -60288117 - AluY SINE Alu 0 311 1 203 0 0 36 chr20 6379967 6379995 -60288010 + (TTA)n Simple_repeat Simple_repeat 2 28 0 369 334 135 32 chr20 6380019 6380360 -60287645 - HAL1b LINE L1 -646 1765 327 1675 200 3 22 chr20 6380377 6380692 -60287313 - AluJb SINE Alu -1 311 3 477 333 110 39 chr20 6380753 6381299 -60286706 - L1MC3 LINE L1 -4864 1508 924 1080 128 0 16 chr20 6383609 6383797 -60284208 + MER53 DNA DNA 4 188 -1 877 209 6 0 chr20 6384568 6384745 -60283260 + MER5B DNA MER1_type 1 178 0 197 255 39 20 chr20 6385003 6385054 -60282951 - L2 LINE L2 -254 3059 3008 842 239 0 16 chr20 6385081 6385265 -60282740 + MER5A DNA MER1_type 1 181 -8 1722 169 10 22 chr20 6385545 6385859 -60282146 - AluSx SINE Alu 0 312 3 642 276 24 84 chr20 6386485 6386864 -60281141 + MLT1G3 LTR MaLR 9 300 -230 201 200 0 40 chr20 6387078 6387128 -60280877 + GA-rich Low_complexity Low_complexity 4 51 0 189 159 0 0 chr20 6388239 6388283 -60279722 + A-rich Low_complexity Low_complexity 1 44 0 220 165 0 51 chr20 6388310 6388389 -60279616 + GA-rich Low_complexity Low_complexity 3 77 0 206 224 20 0 chr20 6388410 6388459 -60279546 + G-rich Low_complexity Low_complexity 4 53 0 4970 150 23 8 chr20 6390660 6391667 -60276338 + L1PA16 LINE L1 5128 6150 -16 303 329 29 22 chr20 6391700 6391837 -60276168 - L1M4c LINE L1 -3798 2584 2447 358 258 114 3 chr20 6392317 6392550 -60275455 - L1M4c LINE L1 -4653 1910 1536 769 325 133 25 chr20 6392580 6392775 -60275230 - L2 LINE L2 -1888 1426 1254 2371 93 0 10 chr20 6392775 6393085 -60274920 + AluSx SINE Alu 1 307 -5 769 325 133 25 chr20 6393085 6393183 -60274822 - L2 LINE L2 -2060 1254 1168 1544 206 62 37 chr20 6393183 6393615 -60274390 - LTR47B LTR ERVL 0 443 1 769 325 133 25 chr20 6393615 6393809 -60274196 - L2 LINE L2 -2146 1168 885 884 58 15 2 chr20 6393809 6393943 -60274062 + L1HS LINE L1 5990 6154 0 450 128 0 0 chr20 6394589 6394648 -60273357 + (GA)n Simple_repeat Simple_repeat 2 63 -16 387 0 0 0 chr20 6394648 6394691 -60273314 + (TG)n Simple_repeat Simple_repeat 1 43 0 450 128 0 0 chr20 6394691 6394709 -60273296 + (GA)n Simple_repeat Simple_repeat 62 79 0 622 190 165 6 chr20 6394765 6394923 -60273082 + MER54B LTR ERVL 1 183 -610 257 82 27 82 chr20 6395037 6395147 -60272858 + (CCCCCA)n Simple_repeat Simple_repeat 4 107 0 217 239 45 0 chr20 6395199 6395287 -60272718 + (CAAA)n Simple_repeat Simple_repeat 2 93 0 204 200 18 18 chr20 6395324 6395379 -60272626 + (CCAA)n Simple_repeat Simple_repeat 2 56 0 747 92 0 0 chr20 6395379 6395488 -60272517 + (TTCC)n Simple_repeat Simple_repeat 2 110 0 1281 160 5 0 chr20 6395488 6395694 -60272311 - AluJo SINE Alu -38 274 68 267 162 73 29 chr20 6395976 6396044 -60271961 - MLT1H LTR MaLR -25 524 454 1348 231 175 19 chr20 6396096 6396582 -60271423 + MLT1G1 LTR MaLR 22 583 -12 242 259 102 37 chr20 6396782 6396890 -60271115 - MLT1G1 LTR MaLR -465 130 16 353 326 0 0 chr20 6396906 6396998 -60271007 + L2 LINE L2 3185 3276 -37 298 329 134 51 chr20 6397060 6397352 -60270653 + L2 LINE L2 2933 3248 -24 318 266 50 79 chr20 6397605 6397744 -60270261 + MIR SINE MIR 127 261 -1 1852 158 0 11 chr20 6398104 6398383 -60269622 + AluJo SINE Alu 12 287 -25 1100 167 28 32 chr20 6399359 6399575 -60268430 + MER20 DNA MER1_type 5 219 0 1904 151 17 3 chr20 6401643 6401934 -60266071 - AluJb SINE Alu -15 297 3 798 274 134 8 chr20 6402081 6402453 -60265552 + LTR16C LTR ERVL 73 491 0 292 391 75 11 chr20 6402481 6402747 -60265258 + L2 LINE L2 2470 2752 -562 682 99 57 7 chr20 6402880 6403021 -60264984 + CT-rich Low_complexity Low_complexity 4 151 0 4507 138 33 14 chr20 6403021 6403848 -60264157 - L1MA8 LINE L1 -172 6119 5278 25 0 0 0 chr20 6404521 6404546 -60263459 + AT_rich Low_complexity Low_complexity 1 25 0 603 272 61 10 chr20 6405658 6405872 -60262133 - MIR SINE MIR -2 260 40 821 214 0 18 chr20 6406104 6406272 -60261733 - FRAM SINE Alu -14 162 1 5301 57 6 6 chr20 6406272 6406952 -60261053 - L1PA7 LINE L1 0 6154 5475 839 142 0 0 chr20 6406969 6407089 -60260916 - FLAM_C SINE Alu -13 120 1 928 216 22 0 chr20 6407578 6407759 -60260246 - MER5A DNA MER1_type -4 185 1 888 260 114 6 chr20 6408030 6408380 -60259625 + LTR33A LTR ERVL 61 448 -75 1054 172 25 0 chr20 6408432 6408630 -60259375 + MER3 DNA MER1_type 7 209 0 273 75 0 0 chr20 6409054 6409094 -60258911 + (CA)n Simple_repeat Simple_repeat 2 41 0 2404 165 14 58 chr20 6409137 6409474 -60258531 - L1MCa LINE L1 -3848 2590 2265 2196 117 7 3 chr20 6409474 6409782 -60258223 - AluSg SINE Alu -1 309 1 2404 165 14 58 chr20 6409782 6409998 -60258007 - L1MCa LINE L1 -4173 2265 2041 2110 142 31 36 chr20 6410035 6410352 -60257653 + Tigger2 DNA MER2_type 2334 2650 -68 2179 112 7 0 chr20 6410352 6410646 -60257359 + AluSx SINE Alu 1 296 -16 2110 142 31 36 chr20 6410646 6410715 -60257290 + Tigger2 DNA MER2_type 2650 2718 0 1552 127 43 49 chr20 6410716 6411339 -60256666 - L1MCa LINE L1 -4383 2043 1328 2474 126 48 10 chr20 6411347 6411759 -60256246 + MSTA LTR MaLR 1 428 0 2315 215 13 13 chr20 6411824 6412358 -60255647 - MER74A LTR ERVL -24 534 1 490 248 28 0 chr20 6413193 6413302 -60254703 + MIR SINE MIR 80 191 -71 189 0 0 0 chr20 6413444 6413465 -60254540 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1233 258 122 0 chr20 6413956 6414375 -60253630 + L1ME2 LINE L1 5686 6155 -9 425 91 0 0 chr20 6414418 6414484 -60253521 - L1P5 LINE L1 -631 5525 5460 1066 186 0 10 chr20 6414484 6414686 -60253319 + L1PA16 LINE L1 5964 6165 -1 219 36 0 0 chr20 6414693 6414721 -60253284 + (CCAA)n Simple_repeat Simple_repeat 4 31 0 1065 150 20 36 chr20 6416073 6416320 -60251685 + L1MA4 LINE L1 6055 6297 -3 894 83 35 0 chr20 6416326 6416471 -60251534 - L1P5 LINE L1 -679 5477 5328 629 191 57 0 chr20 6416655 6416812 -60251193 - L1 LINE L1 -795 5351 5186 3703 130 30 0 chr20 6416812 6417418 -60250587 + L1PB4 LINE L1 5532 6156 0 1087 206 14 106 chr20 6417708 6418141 -60249864 - LTR16A1 LTR ERVL -10 447 55 292 185 200 0 chr20 6418540 6418605 -60249400 + L2 LINE L2 3195 3272 0 350 46 62 0 chr20 6420496 6420561 -60247444 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 252 345 74 20 chr20 6421165 6421313 -60246692 - L3b LINE CR1 -205 1378 1223 368 317 8 24 chr20 6421705 6421828 -60246177 + MIR3 SINE MIR 75 195 -13 259 382 53 0 chr20 6421982 6422113 -60245892 + MIR3 SINE MIR 30 167 -41 1680 189 19 73 chr20 6422532 6422945 -60245060 + MSTD LTR MaLR 6 396 0 827 229 17 6 chr20 6423191 6423366 -60244639 - MER45A DNA AcHobo -1 177 1 2819 7 0 0 chr20 6423504 6423810 -60244195 - AluYa5 SINE Alu -5 306 1 1738 154 89 31 chr20 6424146 6424671 -60243334 + MLT2A2 LTR ERVL 1 554 0 2332 251 93 15 chr20 6425760 6426612 -60241393 + L1MC4 LINE L1 7125 8042 0 442 146 101 0 chr20 6428360 6428449 -60239556 - MLT2C2 LTR ERVL -364 100 3 492 99 0 0 chr20 6428494 6428565 -60239440 + (TA)n Simple_repeat Simple_repeat 2 72 0 621 111 0 0 chr20 6428600 6428690 -60239315 - MLT2C2 LTR ERVL -374 90 1 489 336 24 45 chr20 6429176 6429465 -60238540 - L2 LINE L2 -25 3288 3006 300 324 39 39 chr20 6429694 6429876 -60238129 - L3b LINE CR1 -131 1452 1271 1493 122 9 5 chr20 6429887 6430101 -60237904 + AluSp SINE Alu 86 300 -13 22 0 0 0 chr20 6431033 6431055 -60236950 + AT_rich Low_complexity Low_complexity 1 22 0 1077 151 26 0 chr20 6431185 6431377 -60236628 + L1PA13 LINE L1 5946 6142 -21 2071 136 25 14 chr20 6431824 6432184 -60235821 + MSTB LTR MaLR 6 369 -57 576 293 61 0 chr20 6432394 6432575 -60235430 + MIR SINE MIR 45 236 -26 185 26 0 0 chr20 6432792 6433019 -60234986 + AT_rich Low_complexity Low_complexity 1 227 0 283 279 79 21 chr20 6433557 6433697 -60234308 + MLT1J2 LTR MaLR 17 164 -286 294 157 57 14 chr20 6433863 6433933 -60234072 + MLT1I LTR MaLR 331 403 -6 198 0 0 0 chr20 6435305 6435327 -60232678 + (T)n Simple_repeat Simple_repeat 1 22 0 22 56 0 0 chr20 6435405 6435441 -60232564 + AT_rich Low_complexity Low_complexity 1 36 0 543 286 75 36 chr20 6436516 6436768 -60231237 - MER115 DNA AcHobo -72 621 360 2364 195 33 0 chr20 6436915 6437367 -60230638 - MLT1C LTR MaLR 0 467 1 437 303 8 0 chr20 6437382 6437504 -60230501 - MER115 DNA AcHobo -546 147 25 243 0 0 0 chr20 6438326 6438353 -60229652 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 1786 145 10 46 chr20 6440662 6440965 -60227040 - AluJo SINE Alu -16 296 5 259 162 0 19 chr20 6441621 6441775 -60226230 + AluJo SINE Alu 46 281 -21 25 0 0 0 chr20 6441911 6441936 -60226069 + AT_rich Low_complexity Low_complexity 1 25 0 27 49 0 0 chr20 6442116 6442157 -60225848 + AT_rich Low_complexity Low_complexity 1 41 0 1693 139 78 12 chr20 6442157 6442488 -60225517 - L1MA9 LINE L1 -1 6311 5959 267 225 0 0 chr20 6442690 6442761 -60225244 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 194 193 35 35 chr20 6443318 6443375 -60224630 - MER5A DNA MER1_type -120 69 13 250 294 143 0 chr20 6443394 6443506 -60224499 + MIR SINE MIR 34 159 -62 428 189 0 0 chr20 6443651 6443741 -60224264 + L1MA8 LINE L1 6197 6286 -5 24 0 0 0 chr20 6444891 6444915 -60223090 + AT_rich Low_complexity Low_complexity 1 24 0 332 304 108 18 chr20 6444983 6445517 -60222488 + L1MDa LINE L1 1268 1948 -4773 2241 100 0 13 chr20 6445517 6445816 -60222189 - AluSx SINE Alu -17 295 1 332 304 108 18 chr20 6445816 6445996 -60222009 + L1MDa LINE L1 1948 2110 -4611 4415 178 57 6 chr20 6446082 6446902 -60221103 - MER21B LTR ERV1 -1 862 1 351 261 146 12 chr20 6447053 6447218 -60220787 - L2 LINE L2 -1814 1500 1314 2177 113 54 41 chr20 6447245 6447636 -60220369 + MER57A LTR ERV1 8 403 0 264 331 70 86 chr20 6448312 6448569 -60219436 + L2 LINE L2 3018 3270 -2 1149 190 71 6 chr20 6448700 6449053 -60218952 - MER3 DNA MER1_type 0 2620 2245 401 167 22 0 chr20 6449070 6449160 -60218845 - MER3 DNA MER1_type -87 122 78 6081 184 27 9 chr20 6449875 6451969 -60216036 + L1MB1 LINE L1 4001 6132 -36 774 190 0 0 chr20 6452066 6452254 -60215751 - FLAM_C SINE Alu 0 189 2 664 214 38 25 chr20 6452254 6452472 -60215533 - L1MC/D LINE L1 -534 5636 5429 227 91 0 0 chr20 6452578 6452611 -60215394 + L1 LINE L1 4913 4945 -1201 371 59 0 0 chr20 6452632 6452683 -60215322 + MADE1 DNA Mariner 29 79 -1 943 288 47 23 chr20 6453988 6454466 -60213539 - MLT1G3 LTR MaLR 0 595 21 1103 217 34 8 chr20 6454690 6454953 -60213052 - MLT1H1 LTR MaLR 0 555 286 642 239 48 6 chr20 6455020 6455187 -60212818 - MLT1H1 LTR MaLR -419 176 3 195 42 0 0 chr20 6455510 6455534 -60212471 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 379 276 43 9 chr20 6455539 6455655 -60212350 - L2 LINE L2 -1 3312 3193 872 216 0 6 chr20 6456414 6456590 -60211415 - L1PB3 LINE L1 0 6154 5980 771 268 105 28 chr20 6456703 6457132 -60210873 - L1ME4a LINE L1 -44 6077 5616 988 181 9 37 chr20 6458198 6458413 -60209592 - MER3 DNA MER1_type 0 209 1 465 298 133 9 chr20 6458513 6458693 -60209312 - MIR SINE MIR 0 262 70 2131 95 0 0 chr20 6459041 6459304 -60208701 + AluSx SINE Alu 29 291 -21 245 185 74 12 chr20 6459515 6459596 -60208409 - L1MA9 LINE L1 -5 6307 6222 * 3588 144 16 15 chr20 6459565 6460230 -60207775 - L1MA7 LINE L1 -91 6200 5535 202 109 65 0 chr20 6461557 6461603 -60206402 + (TA)n Simple_repeat Simple_repeat 1 49 0 256 347 70 19 chr20 6461656 6461927 -60206078 + L3 LINE CR1 1090 1374 -203 184 286 36 0 chr20 6462009 6462065 -60205940 + MIR3 SINE MIR 151 208 0 515 291 65 4 chr20 6462820 6463050 -60204955 + LTR16A LTR ERVL 18 261 -189 386 268 46 26 chr20 6463292 6463445 -60204560 - MIR SINE MIR 0 262 107 489 32 0 0 chr20 6463839 6463901 -60204104 - L1PA16 LINE L1 -314 5852 5791 2348 128 16 13 chr20 6465184 6465566 -60202439 - L1PA15 LINE L1 0 6165 5783 539 253 175 62 chr20 6465662 6466034 -60201971 - LTR33A LTR ERVL -9 514 101 22 70 0 0 chr20 6467418 6467461 -60200544 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr20 6468457 6468480 -60199525 + AT_rich Low_complexity Low_complexity 1 23 0 28 29 0 0 chr20 6468759 6468794 -60199211 + AT_rich Low_complexity Low_complexity 1 35 0 279 275 29 0 chr20 6469044 6469113 -60198892 + polypyrimidine Low_complexity Low_complexity 5 75 0 1477 212 26 0 chr20 6469725 6470032 -60197973 - MLT1H LTR MaLR -226 323 9 3547 142 32 18 chr20 6470690 6471375 -60196630 - L1MA7 LINE L1 -51 6240 5546 1604 184 7 39 chr20 6471696 6472006 -60195999 - AluJo SINE Alu -12 300 1 1869 299 116 8 chr20 6472502 6473361 -60194644 - L2 LINE L2 -138 3175 2224 6622 202 18 4 chr20 6473380 6475178 -60192827 + L1PA15-16 LINE L1 12 1383 -5466 17941 59 11 1 chr20 6475278 6477819 -60190186 - L1P4 LINE L1 -699 5464 2898 224 261 43 0 chr20 6478085 6478154 -60189851 + L2 LINE L2 2979 3050 -222 247 287 115 8 chr20 6478337 6478459 -60189546 - MER46C DNA MER2_type -62 276 142 22999 48 1 0 chr20 6478714 6482536 -60185469 + L1PA2 LINE L1 2323 6155 0 21 0 0 0 chr20 6482887 6482908 -60185097 + AT_rich Low_complexity Low_complexity 1 21 0 1994 123 3 36 chr20 6483337 6483645 -60184360 - AluSx SINE Alu -14 298 1 928 216 22 0 chr20 6484134 6484315 -60183690 - MER5A DNA MER1_type -4 185 1 888 260 114 6 chr20 6484586 6484936 -60183069 + LTR33A LTR ERVL 61 448 -75 1054 172 25 0 chr20 6484988 6485186 -60182819 + MER3 DNA MER1_type 7 209 0 273 75 0 0 chr20 6485610 6485650 -60182355 + (CA)n Simple_repeat Simple_repeat 2 41 0 2415 165 12 58 chr20 6485693 6486031 -60181974 - L1MCa LINE L1 -3848 2590 2265 2196 117 7 3 chr20 6486031 6486339 -60181666 - AluSg SINE Alu -1 309 1 2415 165 12 58 chr20 6486339 6486555 -60181450 - L1MCa LINE L1 -4173 2265 2041 1050 128 53 11 chr20 6486564 6486772 -60181233 + Tigger2 DNA MER2_type 8 2519 -199 3352 91 11 0 chr20 6487025 6487649 -60180356 - L1PB1 LINE L1 -143 6008 5285 448 261 91 32 chr20 6487679 6487938 -60180067 + L1MCa LINE L1 2244 2511 -3917 402 278 158 53 chr20 6488003 6488628 -60179377 + HAL1 LINE L1 1 691 -1816 1072 21 28 0 chr20 6488703 6488845 -60179160 - L1PA4 LINE L1 -788 5358 5213 6630 30 0 1 chr20 6488848 6489638 -60178367 + L1PA4 LINE L1 5361 6149 -6 1944 72 0 0 chr20 6589747 6589983 -60078022 - AluY SINE Alu -75 236 1 1854 241 48 47 chr20 6590068 6591224 -60076781 - L1M2 LINE L1 -4172 2677 1574 704 342 39 24 chr20 6591923 6592335 -60075670 - L1M2 LINE L1 -5719 1060 643 275 200 0 0 chr20 6592339 6592399 -60075606 + MLT1F1 LTR MaLR 500 559 -8 723 184 0 22 chr20 6592454 6592633 -60075372 + CT-rich Low_complexity Low_complexity 2 176 0 595 226 25 3 chr20 6592673 6592960 -60075045 + CT-rich Low_complexity Low_complexity 1 293 0 550 279 59 69 chr20 6593042 6593911 -60074094 - L1M4c LINE L1 -2018 4364 3496 357 277 117 49 chr20 6593944 6594062 -60073943 - L1M4c LINE L1 -2989 3393 3284 2984 118 12 0 chr20 6594062 6594485 -60073520 - MSTA LTR MaLR 0 428 1 357 277 117 49 chr20 6594485 6594853 -60073152 - L1M4c LINE L1 -3098 3284 2874 5703 203 2 3 chr20 6595097 6596366 -60071639 + L1 LINE L1 3868 5135 -1011 258 56 0 0 chr20 6596701 6596737 -60071268 + (TGG)n Simple_repeat Simple_repeat 2 37 0 220 165 0 51 chr20 6596737 6596816 -60071189 + GA-rich Low_complexity Low_complexity 3 77 0 206 224 20 0 chr20 6596837 6596886 -60071119 + G-rich Low_complexity Low_complexity 4 53 0 4970 150 23 8 chr20 6599087 6600094 -60067911 + L1PA16 LINE L1 5128 6150 -16 303 329 29 22 chr20 6600127 6600264 -60067741 - L1M4c LINE L1 -3798 2584 2447 358 258 114 3 chr20 6600744 6600977 -60067028 - L1M4c LINE L1 -4653 1910 1536 769 325 133 25 chr20 6601007 6601202 -60066803 - L2 LINE L2 -1888 1426 1254 2371 93 0 10 chr20 6601202 6601512 -60066493 + AluSx SINE Alu 1 307 -5 769 325 133 25 chr20 6601512 6601610 -60066395 - L2 LINE L2 -2060 1254 1168 1544 206 62 37 chr20 6601610 6602042 -60065963 - LTR47B LTR ERVL 0 443 1 769 325 133 25 chr20 6602042 6602236 -60065769 - L2 LINE L2 -2146 1168 885 884 58 15 2 chr20 6602236 6602370 -60065635 + L1HS LINE L1 5990 6154 0 414 135 0 0 chr20 6603016 6603071 -60064934 + (GA)n Simple_repeat Simple_repeat 2 59 -16 387 0 0 0 chr20 6603071 6603114 -60064891 + (TG)n Simple_repeat Simple_repeat 1 43 0 414 135 0 0 chr20 6603114 6603132 -60064873 + (GA)n Simple_repeat Simple_repeat 58 75 0 2316 175 102 0 chr20 6603188 6603640 -60064365 + MER54B LTR ERVL 1 498 -295 225 83 0 0 chr20 6603642 6603678 -60064327 + (CA)n Simple_repeat Simple_repeat 2 37 0 1033 269 44 16 chr20 6604229 6604657 -60063348 - L1MC3 LINE L1 -1639 6382 5943 245 275 125 49 chr20 6604717 6605190 -60062815 - L1MC3 LINE L1 -1567 4815 4307 6530 21 1 0 chr20 6605238 6606029 -60061976 - L1PA4 LINE L1 -3 6152 5361 1072 21 28 0 chr20 6606032 6606174 -60061831 + L1PA4 LINE L1 5213 5358 -788 584 270 152 46 chr20 6606249 6606874 -60061131 - HAL1 LINE L1 -1816 691 1 450 268 95 30 chr20 6606939 6607222 -60060783 - L1MC3 LINE L1 -3917 2467 2169 1657 99 9 4 chr20 6607227 6607997 -60060008 + L1PB1 LINE L1 5285 6151 0 2112 105 0 46 chr20 6608129 6608453 -60059552 - AluY SINE Alu -2 309 1 203 0 0 36 chr20 6608532 6608560 -60059445 + (TTA)n Simple_repeat Simple_repeat 2 28 0 369 334 135 32 chr20 6608584 6608925 -60059080 - HAL1b LINE L1 -646 1765 327 1710 201 3 19 chr20 6608942 6609256 -60058749 - AluJb SINE Alu -1 311 3 465 335 110 39 chr20 6609317 6609863 -60058142 - L1MC3 LINE L1 -4864 1508 924 1080 128 0 16 chr20 6612172 6612360 -60055645 + MER53 DNA DNA 4 188 -1 866 209 6 0 chr20 6613131 6613308 -60054697 + MER5B DNA MER1_type 1 178 0 197 255 39 20 chr20 6613567 6613618 -60054387 - L2 LINE L2 -254 3059 3008 842 239 0 16 chr20 6613645 6613829 -60054176 + MER5A DNA MER1_type 1 181 -8 1749 166 10 22 chr20 6614109 6614423 -60053582 - AluSx SINE Alu 0 312 3 642 276 24 84 chr20 6615049 6615428 -60052577 + MLT1G3 LTR MaLR 9 300 -230 201 200 0 40 chr20 6615642 6615692 -60052313 + GA-rich Low_complexity Low_complexity 4 51 0 413 195 49 0 chr20 6616260 6616383 -60051622 + CT-rich Low_complexity Low_complexity 4 132 0 1120 98 0 22 chr20 6616395 6616579 -60051426 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1281 160 5 0 chr20 6616582 6616788 -60051217 - AluJo SINE Alu -38 274 68 267 162 73 29 chr20 6617070 6617138 -60050867 - MLT1H LTR MaLR -25 524 454 1348 231 175 19 chr20 6617190 6617676 -60050329 + MLT1G1 LTR MaLR 22 583 -12 242 259 102 37 chr20 6617876 6617984 -60050021 - MLT1G1 LTR MaLR -465 130 16 353 326 0 0 chr20 6618000 6618092 -60049913 + L2 LINE L2 3185 3276 -37 285 332 134 51 chr20 6618154 6618446 -60049559 + L2 LINE L2 2933 3248 -24 414 246 22 43 chr20 6618699 6618837 -60049168 + MIR SINE MIR 127 261 -1 1884 156 0 11 chr20 6619197 6619479 -60048526 + AluJo SINE Alu 12 290 -22 1100 167 28 32 chr20 6620452 6620668 -60047337 + MER20 DNA MER1_type 5 219 0 1904 151 17 3 chr20 6622736 6623027 -60044978 - AluJb SINE Alu -15 297 3 798 274 134 8 chr20 6623174 6623546 -60044459 + LTR16C LTR ERVL 73 491 0 292 391 75 11 chr20 6623574 6623840 -60044165 + L2 LINE L2 2470 2752 -562 682 99 57 7 chr20 6623973 6624114 -60043891 + CT-rich Low_complexity Low_complexity 4 151 0 4507 138 33 14 chr20 6624114 6624941 -60043064 - L1MA8 LINE L1 -172 6119 5278 25 0 0 0 chr20 6625614 6625639 -60042366 + AT_rich Low_complexity Low_complexity 1 25 0 603 272 61 10 chr20 6626751 6626965 -60041040 - MIR SINE MIR -2 260 40 821 214 0 18 chr20 6627197 6627365 -60040640 - FRAM SINE Alu -14 162 1 5301 57 6 6 chr20 6627365 6628045 -60039960 - L1PA7 LINE L1 0 6154 5475 839 142 0 0 chr20 6628062 6628182 -60039823 - FLAM_C SINE Alu -13 120 1 928 216 22 0 chr20 6628671 6628852 -60039153 - MER5A DNA MER1_type -4 185 1 888 260 114 6 chr20 6629123 6629473 -60038532 + LTR33A LTR ERVL 61 448 -75 1054 172 25 0 chr20 6629525 6629723 -60038282 + MER3 DNA MER1_type 7 209 0 273 75 0 0 chr20 6630147 6630187 -60037818 + (CA)n Simple_repeat Simple_repeat 2 41 0 2432 164 12 58 chr20 6630230 6630568 -60037437 - L1MCa LINE L1 -3848 2590 2265 2196 117 7 3 chr20 6630568 6630876 -60037129 - AluSg SINE Alu -1 309 1 2432 164 12 58 chr20 6630876 6631092 -60036913 - L1MCa LINE L1 -4173 2265 2041 2110 142 31 36 chr20 6631129 6631446 -60036559 + Tigger2 DNA MER2_type 2334 2650 -68 2271 112 0 0 chr20 6631446 6631742 -60036263 + AluSx SINE Alu 1 296 -16 2110 142 31 36 chr20 6631742 6631811 -60036194 + Tigger2 DNA MER2_type 2650 2718 0 1552 127 43 49 chr20 6631812 6632435 -60035570 - L1MCa LINE L1 -4383 2043 1328 2474 126 48 10 chr20 6632443 6632855 -60035150 + MSTA LTR MaLR 1 428 0 2315 215 13 13 chr20 6632920 6633454 -60034551 - MER74A LTR ERVL -24 534 1 490 248 28 0 chr20 6634289 6634398 -60033607 + MIR SINE MIR 80 191 -71 189 0 0 0 chr20 6634540 6634561 -60033444 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1233 258 122 0 chr20 6635052 6635471 -60032534 + L1ME2 LINE L1 5686 6155 -9 425 91 0 0 chr20 6635514 6635580 -60032425 - L1P5 LINE L1 -631 5525 5460 1066 186 0 10 chr20 6635580 6635782 -60032223 + L1PA16 LINE L1 5964 6165 -1 219 36 0 0 chr20 6635789 6635817 -60032188 + (CCAA)n Simple_repeat Simple_repeat 4 31 0 1065 150 20 36 chr20 6637169 6637416 -60030589 + L1MA4 LINE L1 6055 6297 -3 894 83 35 0 chr20 6637422 6637567 -60030438 - L1P5 LINE L1 -679 5477 5328 629 191 57 0 chr20 6637751 6637908 -60030097 - L1 LINE L1 -795 5351 5186 3703 130 30 0 chr20 6637908 6638514 -60029491 + L1PB4 LINE L1 5532 6156 0 1087 206 14 106 chr20 6638804 6639237 -60028768 - LTR16A1 LTR ERVL -10 447 55 292 185 200 0 chr20 6639636 6639701 -60028304 + L2 LINE L2 3195 3272 0 350 46 62 0 chr20 6641592 6641657 -60026348 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 252 345 74 20 chr20 6642261 6642409 -60025596 - L3b LINE CR1 -205 1378 1223 368 317 8 24 chr20 6642801 6642924 -60025081 + MIR3 SINE MIR 75 195 -13 259 382 53 0 chr20 6643078 6643209 -60024796 + MIR3 SINE MIR 30 167 -41 1680 189 19 73 chr20 6643628 6644041 -60023964 + MSTD LTR MaLR 6 396 0 827 229 17 6 chr20 6644287 6644462 -60023543 - MER45A DNA AcHobo -1 177 1 2819 7 0 0 chr20 6644600 6644906 -60023099 - AluYa5 SINE Alu -5 306 1 1738 154 89 31 chr20 6645242 6645767 -60022238 + MLT2A2 LTR ERVL 1 554 0 2332 251 93 15 chr20 6646856 6647708 -60020297 + L1MC4 LINE L1 7125 8042 0 442 146 101 0 chr20 6649460 6649549 -60018456 - MLT2C2 LTR ERVL -364 100 3 492 99 0 0 chr20 6649594 6649665 -60018340 + (TA)n Simple_repeat Simple_repeat 1 71 0 621 111 0 0 chr20 6649700 6649790 -60018215 - MLT2C2 LTR ERVL -374 90 1 489 336 24 45 chr20 6650276 6650565 -60017440 - L2 LINE L2 -25 3288 3006 300 324 39 39 chr20 6650794 6650976 -60017029 - L3b LINE CR1 -131 1452 1271 1493 122 9 5 chr20 6650987 6651201 -60016804 + AluSp SINE Alu 86 300 -13 22 0 0 0 chr20 6652133 6652155 -60015850 + AT_rich Low_complexity Low_complexity 1 22 0 1077 151 26 0 chr20 6652285 6652477 -60015528 + L1PA13 LINE L1 5946 6142 -21 2071 136 25 14 chr20 6652924 6653284 -60014721 + MSTB LTR MaLR 6 369 -57 576 293 61 0 chr20 6653494 6653675 -60014330 + MIR SINE MIR 45 236 -26 185 26 0 0 chr20 6653892 6654119 -60013886 + AT_rich Low_complexity Low_complexity 1 227 0 283 279 79 21 chr20 6654657 6654797 -60013208 + MLT1J2 LTR MaLR 17 164 -286 294 157 57 14 chr20 6654963 6655033 -60012972 + MLT1I LTR MaLR 331 403 -6 198 0 0 0 chr20 6656405 6656427 -60011578 + (T)n Simple_repeat Simple_repeat 1 22 0 22 56 0 0 chr20 6656505 6656541 -60011464 + AT_rich Low_complexity Low_complexity 1 36 0 543 286 75 36 chr20 6657616 6657868 -60010137 - MER115 DNA AcHobo -72 621 360 2364 195 33 0 chr20 6658015 6658467 -60009538 - MLT1C LTR MaLR 0 467 1 437 303 8 0 chr20 6658482 6658604 -60009401 - MER115 DNA AcHobo -546 147 25 243 0 0 0 chr20 6659426 6659453 -60008552 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 1786 145 10 46 chr20 6661762 6662065 -60005940 - AluJo SINE Alu -16 296 5 259 162 0 19 chr20 6662721 6662875 -60005130 + AluJo SINE Alu 46 281 -21 24 0 0 0 chr20 6663010 6663034 -60004971 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr20 6663214 6663255 -60004750 + AT_rich Low_complexity Low_complexity 1 41 0 1693 139 78 12 chr20 6663255 6663586 -60004419 - L1MA9 LINE L1 -1 6311 5959 267 225 0 0 chr20 6663788 6663859 -60004146 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 194 193 35 35 chr20 6664416 6664473 -60003532 - MER5A DNA MER1_type -120 69 13 250 294 143 0 chr20 6664492 6664604 -60003401 + MIR SINE MIR 34 159 -62 428 189 0 0 chr20 6664749 6664839 -60003166 + L1MA8 LINE L1 6197 6286 -5 24 0 0 0 chr20 6665989 6666013 -60001992 + AT_rich Low_complexity Low_complexity 1 24 0 332 304 108 18 chr20 6666081 6666615 -60001390 + L1MDa LINE L1 1268 1948 -4773 2241 100 0 13 chr20 6666615 6666914 -60001091 - AluSx SINE Alu -17 295 1 332 304 108 18 chr20 6666914 6667094 -60000911 + L1MDa LINE L1 1948 2110 -4611 4415 178 57 6 chr20 6667180 6668000 -60000005 - MER21B LTR ERV1 -1 862 1 351 261 146 12 chr20 6668151 6668316 -59999689 - L2 LINE L2 -1814 1500 1314 2177 113 54 41 chr20 6668343 6668734 -59999271 + MER57A LTR ERV1 8 403 0 264 331 70 86 chr20 6669410 6669667 -59998338 + L2 LINE L2 3018 3270 -2 1149 190 71 6 chr20 6669798 6670151 -59997854 - Charlie5 DNA MER1_type 0 2620 2245 401 153 24 0 chr20 6670173 6670258 -59997747 - Charlie5 DNA MER1_type -2495 117 31 6099 184 27 9 chr20 6670973 6673066 -59994939 + L1MB1 LINE L1 4001 6132 -36 774 190 0 0 chr20 6673163 6673351 -59994654 - FLAM_C SINE Alu 0 189 2 664 214 38 25 chr20 6673351 6673569 -59994436 - L1MC/D LINE L1 -534 5636 5429 227 91 0 0 chr20 6673675 6673708 -59994297 + L1 LINE L1 4913 4945 -1201 371 59 0 0 chr20 6673729 6673780 -59994225 + MADE1 DNA Mariner 29 79 -1 943 288 47 23 chr20 6675085 6675563 -59992442 - MLT1G3 LTR MaLR 0 595 21 1103 217 34 8 chr20 6675787 6676050 -59991955 - MLT1H1 LTR MaLR 0 555 286 642 239 48 6 chr20 6676117 6676284 -59991721 - MLT1H1 LTR MaLR -419 176 3 195 42 0 0 chr20 6676607 6676631 -59991374 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 379 276 43 9 chr20 6676636 6676752 -59991253 - L2 LINE L2 -1 3312 3193 872 216 0 6 chr20 6677511 6677687 -59990318 - L1PB3 LINE L1 0 6154 5980 771 268 105 28 chr20 6677800 6678229 -59989776 - L1ME4a LINE L1 -44 6077 5616 988 181 9 37 chr20 6679295 6679510 -59988495 - MER3 DNA MER1_type 0 209 1 465 298 133 9 chr20 6679610 6679790 -59988215 - MIR SINE MIR 0 262 70 2131 95 0 0 chr20 6680138 6680401 -59987604 + AluSx SINE Alu 29 291 -21 245 185 74 12 chr20 6680612 6680693 -59987312 - L1MA9 LINE L1 -5 6307 6222 * 3588 144 16 15 chr20 6680662 6681327 -59986678 - L1MA7 LINE L1 -91 6200 5535 202 109 65 0 chr20 6682654 6682700 -59985305 + (TA)n Simple_repeat Simple_repeat 2 50 0 256 347 70 19 chr20 6682753 6683024 -59984981 + L3 LINE CR1 1090 1374 -203 184 286 36 0 chr20 6683106 6683162 -59984843 + MIR3 SINE MIR 151 208 0 538 287 65 4 chr20 6683917 6684147 -59983858 + LTR16A LTR ERVL 18 261 -189 384 268 46 26 chr20 6684389 6684542 -59983463 - MIR SINE MIR 0 262 107 489 32 0 0 chr20 6684936 6684998 -59983007 - L1PA16 LINE L1 -314 5852 5791 2348 128 16 13 chr20 6686282 6686664 -59981341 - L1PA15 LINE L1 0 6165 5783 539 253 175 62 chr20 6686760 6687132 -59980873 - LTR33A LTR ERVL -9 514 101 22 70 0 0 chr20 6688508 6688551 -59979454 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr20 6689547 6689570 -59978435 + AT_rich Low_complexity Low_complexity 1 23 0 28 29 0 0 chr20 6689849 6689884 -59978121 + AT_rich Low_complexity Low_complexity 1 35 0 279 275 29 0 chr20 6690134 6690203 -59977802 + polypyrimidine Low_complexity Low_complexity 5 75 0 1477 212 26 0 chr20 6690815 6691122 -59976883 - MLT1H LTR MaLR -226 323 9 3529 143 32 18 chr20 6691781 6692466 -59975539 - L1MA7 LINE L1 -51 6240 5546 1604 184 7 39 chr20 6692787 6693097 -59974908 - AluJo SINE Alu -12 300 1 1886 297 116 8 chr20 6693593 6694452 -59973553 - L2 LINE L2 -138 3175 2224 12638 173 23 5 chr20 6694471 6698050 -59969955 + L1PA15-16 LINE L1 12 3219 -3630 569 176 162 0 chr20 6698094 6698236 -59969769 - MER7A DNA MER2_type -182 164 2 1375 168 21 32 chr20 6698236 6698516 -59969489 - Tigger3(Golem) DNA MER2_type -2752 277 1 40668 34 23 2 chr20 6699220 6705243 -59962762 - L1PA2 LINE L1 0 6155 3 2286 79 16 7 chr20 6705336 6705641 -59962364 - AluY SINE Alu -3 308 1 946 175 0 11 chr20 6706568 6706751 -59961254 + MER82 DNA MER2_type 23 203 -450 396 125 0 0 chr20 6706752 6706816 -59961189 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 1642 245 48 5 chr20 6706819 6707239 -59960766 + MER82 DNA MER2_type 212 649 -4 663 223 8 0 chr20 6707329 6707450 -59960555 + FLAM_C SINE Alu 1 122 -21 478 162 38 0 chr20 6707573 6707678 -59960327 + L1MC4a LINE L1 5648 5756 -408 385 276 24 8 chr20 6707822 6707949 -59960056 + L1MC4a LINE L1 5741 5869 -1939 5246 157 38 11 chr20 6708192 6709780 -59958225 + L1PA16 LINE L1 4536 6157 -9 210 218 0 58 chr20 6709990 6710077 -59957928 + T-rich Low_complexity Low_complexity 2 83 0 2306 133 3 5 chr20 6710107 6710476 -59957529 - L1PB1 LINE L1 -1 6150 5783 574 88 0 85 chr20 6710497 6710806 -59957199 + (TA)n Simple_repeat Simple_repeat 1 282 0 236 108 0 0 chr20 6710807 6710844 -59957161 + L1P4 LINE L1 5782 5818 -345 * 239 232 0 0 chr20 6710843 6710899 -59957106 - L1 LINE L1 -2139 4007 3952 518 162 0 36 chr20 6710918 6711118 -59956887 + (TA)n Simple_repeat Simple_repeat 1 192 0 14379 184 58 32 chr20 6711118 6717452 -59950553 - L1P5 LINE L1 -360 6507 6 319 292 115 49 chr20 6718060 6718451 -59949554 - HAL1 LINE L1 -762 1745 1329 322 270 40 48 chr20 6718468 6718594 -59949411 - L1MEd LINE L1 -4971 1148 1024 288 165 0 155 chr20 6718643 6718746 -59949259 + L1ME3 LINE L1 5949 6035 -127 2288 103 7 0 chr20 6719517 6719818 -59948187 - AluSp SINE Alu -10 303 1 612 188 16 8 chr20 6719874 6720002 -59948003 - MER45R DNA AcHobo -1 1580 1452 720 199 0 7 chr20 6720185 6720336 -59947669 - L1MB3 LINE L1 -2 6181 6032 510 162 8 17 chr20 6720340 6720457 -59947548 - MER45R DNA AcHobo -99 1482 1367 2940 39 0 0 chr20 6720557 6720912 -59947093 - L1PA4 LINE L1 -3 6152 5798 1224 233 78 8 chr20 6720912 6721273 -59946732 + MLT1C LTR MaLR 82 467 0 4491 228 27 54 chr20 6721273 6722686 -59945319 - MER45R DNA AcHobo -206 1375 1 30 27 0 0 chr20 6722904 6722941 -59945064 + AT_rich Low_complexity Low_complexity 1 37 0 1760 168 25 7 chr20 6722943 6723228 -59944777 - AluJo SINE Alu -22 290 1 14587 131 16 13 chr20 6726069 6728478 -59939527 - Tigger1 DNA MER2_type -1 2417 1 2675 115 44 0 chr20 6728662 6729072 -59938933 - MSTA LTR MaLR 0 428 1 2317 86 7 3 chr20 6730561 6730862 -59937143 + AluSc SINE Alu 1 302 -7 201 384 14 0 chr20 6732952 6733049 -59934956 + MIR SINE MIR 56 144 -64 208 225 0 0 chr20 6733089 6733129 -59934876 + CT-rich Low_complexity Low_complexity 3 42 0 1579 239 66 8 chr20 6733141 6733455 -59934550 + MER90 LTR ERV1 1 295 -319 2599 46 0 0 chr20 6733455 6733758 -59934247 - AluY SINE Alu -8 303 1 1579 239 66 8 chr20 6733758 6733935 -59934070 + MER90 LTR ERV1 295 614 0 196 319 97 49 chr20 6734039 6734183 -59933822 + MIR3 SINE MIR 53 203 -5 328 313 92 12 chr20 6734754 6734917 -59933088 - MIR SINE MIR -16 246 71 2528 65 3 0 chr20 6734974 6735284 -59932721 - AluY SINE Alu 0 311 1 738 272 75 8 chr20 6735541 6735809 -59932196 + MLT1B LTR MaLR 65 350 -40 2307 231 12 12 chr20 6735861 6736375 -59931630 + MLT1F LTR MaLR 24 537 -5 2100 193 0 48 chr20 6736472 6736697 -59931308 + MER63B DNA MER1_type 1 194 -868 1630 202 7 10 chr20 6736697 6736989 -59931016 + AluJb SINE Alu 6 296 -16 2100 193 0 48 chr20 6736989 6737218 -59930787 + MER63B DNA MER1_type 194 433 -3 416 301 196 0 chr20 6737706 6737879 -59930126 + MIR SINE MIR 56 262 0 303 260 27 107 chr20 6738573 6738723 -59929282 + MIR SINE MIR 91 228 -34 1006 259 73 34 chr20 6739829 6740239 -59927766 + LTR16A LTR ERVL 25 450 0 1645 163 123 30 chr20 6740583 6740981 -59927024 + MER63B DNA MER1_type 2 436 0 407 273 47 40 chr20 6742527 6742592 -59925413 - MIR SINE MIR -62 200 137 1724 160 31 82 chr20 6742592 6743017 -59924988 + MER57A LTR ERV1 1 403 0 407 273 47 40 chr20 6743017 6743101 -59924904 - MIR SINE MIR -125 137 50 777 239 104 63 chr20 6743250 6743665 -59924340 + MER50 LTR ERV1 10 441 -293 1026 207 28 26 chr20 6743669 6744029 -59923976 - L1ME LINE L1 -627 5535 5175 26 0 0 0 chr20 6744029 6744055 -59923950 + AT_rich Low_complexity Low_complexity 1 26 0 4266 109 14 5 chr20 6744057 6744691 -59923314 - L1PA14 LINE L1 -17 6144 5505 286 244 96 0 chr20 6744692 6744827 -59923178 - L1ME LINE L1 -960 5186 5039 2382 94 0 3 chr20 6744884 6745193 -59922812 - AluY SINE Alu -3 308 1 497 210 18 27 chr20 6745259 6745427 -59922578 - L1ME LINE L1 -1100 5046 4876 1867 254 138 40 chr20 6745664 6746459 -59921546 + L2 LINE L2 1417 2289 -1025 332 209 23 12 chr20 6746967 6747053 -59920952 - LTR16C LTR ERVL -2 489 403 1073 360 108 2 chr20 6747283 6747914 -59920091 + L2 LINE L2 952 1649 -1665 311 230 65 101 chr20 6747915 6748054 -59919951 - L1ME LINE L1 -409 5755 5622 530 218 98 36 chr20 6748055 6748248 -59919757 + MLT1J2 LTR MaLR 2 206 -244 709 276 41 16 chr20 6748400 6748790 -59919215 - L1ME LINE L1 -538 5626 5226 7873 138 22 18 chr20 6748838 6751409 -59916596 - L1MA3 LINE L1 0 6305 3725 1724 196 5 7 chr20 6751406 6751820 -59916185 + L1 LINE L1 2957 3369 -2777 * 971 205 45 68 chr20 6752188 6752480 -59915525 + MLT2D LTR ERVL 86 370 -44 333 68 0 0 chr20 6752480 6752524 -59915481 + (CA)n Simple_repeat Simple_repeat 2 45 0 971 205 45 68 chr20 6752524 6752568 -59915437 + MLT2D LTR ERVL 370 414 0 536 341 24 0 chr20 6753047 6753258 -59914747 + MIR SINE MIR 47 262 0 572 248 8 0 chr20 6753291 6753416 -59914589 - L2 LINE L2 -1 3312 3187 655 269 196 16 chr20 6753527 6753899 -59914106 - MLT1H LTR MaLR -110 439 1 1718 192 126 21 chr20 6755161 6755348 -59912657 + MLT1C LTR MaLR 1 167 -300 387 60 0 0 chr20 6755348 6755398 -59912607 + (CA)n Simple_repeat Simple_repeat 2 51 0 1718 192 126 21 chr20 6755398 6755632 -59912373 + MLT1C LTR MaLR 167 466 -1 265 282 24 12 chr20 6755814 6755899 -59912106 + LTR16A1 LTR ERVL 1 86 -371 672 194 71 0 chr20 6755983 6756138 -59911867 + LTR16A1 LTR ERVL 242 407 -50 2274 102 3 0 chr20 6756980 6757275 -59910730 - AluSg SINE Alu -14 296 1 819 297 68 12 chr20 6757431 6757879 -59910126 - L1MC4a LINE L1 -139 5982 5513 801 175 48 12 chr20 6757905 6758071 -59909934 + MER58A DNA MER1_type 42 213 -11 438 133 0 0 chr20 6758075 6758150 -59909855 + L1M2 LINE L1 5710 5784 -528 380 189 0 0 chr20 6758152 6758226 -59909779 + L1PA15 LINE L1 6087 6160 -5 327 299 45 38 chr20 6758231 6758388 -59909617 + L1 LINE L1 3275 3432 -2714 2545 181 7 0 chr20 6758775 6759239 -59908766 + L1PA16 LINE L1 5694 6160 -6 1531 209 49 49 chr20 6759239 6759735 -59908270 + L1MA9 LINE L1 5776 6274 -38 352 250 144 101 chr20 6760076 6760520 -59907485 - L1