3248 215 20 3 chr20 0 735 -66667270 + L1PA15-16 LINE L1 1867 2614 -4235 992 147 0 0 chr20 735 878 -66667127 + AluJo SINE Alu 1 143 -169 835 105 8 8 chr20 912 1045 -66666960 + L1PA15 LINE L1 6033 6165 0 502 273 17 17 chr20 1045 1221 -66666784 - L1MEc LINE L1 -4676 1720 1545 227 301 2 9 chr20 1673 1782 -66666223 + MIR3 SINE MIR 78 167 -41 247 158 35 53 chr20 1834 1891 -66666114 + MIR3 SINE MIR 108 163 -45 246 315 18 36 chr20 1927 2038 -66665967 + MER117 DNA MER1_type 74 182 -15 2322 84 3 3 chr20 2280 2578 -66665427 - AluSq SINE Alu -15 298 1 23 0 0 0 chr20 2590 2613 -66665392 + AT_rich Low_complexity Low_complexity 1 23 0 6979 127 14 6 chr20 3397 5026 -66662979 - L1MA2 LINE L1 0 6304 4664 3107 123 43 2 chr20 5028 5514 -66662491 + MER75 DNA T2_type 1 506 -8 206 62 31 0 chr20 5705 5737 -66662268 + (TC)n Simple_repeat Simple_repeat 1 33 0 261 0 0 0 chr20 7563 7592 -66660413 + (CA)n Simple_repeat Simple_repeat 2 30 0 341 308 47 86 chr20 7592 7826 -66660179 - L1ME LINE L1 -540 5581 5357 225 240 90 20 chr20 8164 8264 -66659741 - L1ME LINE L1 -251 5870 5764 35 24 0 0 chr20 8420 8462 -66659543 + AT_rich Low_complexity Low_complexity 1 42 0 234 341 12 12 chr20 8753 8838 -66659167 + L3 LINE CR1 1455 1539 -38 1654 283 61 6 chr20 9000 9711 -66658294 + L2 LINE L2 2417 3172 -141 1911 189 0 22 chr20 9761 10163 -66657842 - L1 LINE L1 -754 5392 5000 438 220 78 14 chr20 10188 10329 -66657676 + L2 LINE L2 3162 3311 -2 222 163 23 0 chr20 10753 10796 -66657209 + (TA)n Simple_repeat Simple_repeat 2 45 0 239 300 12 0 chr20 10834 10914 -66657091 + L2 LINE L2 2892 2972 -342 615 304 140 53 chr20 10967 11090 -66656915 + L2 LINE L2 1177 1288 -2026 2099 131 0 0 chr20 11090 11388 -66656617 - AluSc SINE Alu -11 298 1 615 304 140 53 chr20 11388 11659 -66656346 + L2 LINE L2 1288 1534 -1780 2304 98 10 3 chr20 11659 11964 -66656041 - AluSq SINE Alu -4 309 3 615 304 140 53 chr20 11964 12341 -66655664 + L2 LINE L2 1534 2016 -1298 2626 124 26 35 chr20 12820 13048 -66654957 - L1MA5 LINE L1 0 6300 6077 2050 151 15 18 chr20 13048 13386 -66654619 - MER1B DNA MER1_type 0 337 1 2626 124 26 35 chr20 13386 13616 -66654389 - L1MA5 LINE L1 -223 6077 5846 249 305 60 46 chr20 13719 13870 -66654135 + LTR16C LTR ERVL 323 475 -16 209 291 123 50 chr20 13894 14073 -66653932 + L2 LINE L2 2033 2224 -1090 2157 137 12 9 chr20 14074 14417 -66653588 - L1P LINE L1 -2289 3857 3514 214 255 0 0 chr20 14461 14508 -66653497 + CT-rich Low_complexity Low_complexity 1 47 0 2374 88 3 0 chr20 16022 16317 -66651688 - AluY SINE Alu -15 296 1 6667 73 24 0 chr20 16322 17573 -66650432 - L1PA8 LINE L1 -11 6161 4897 4410 106 12 5 chr20 17573 18236 -66649769 + L1P LINE L1 2119 2786 -3360 523 250 9 0 chr20 18434 18546 -66649459 + MER81 DNA DNA 1 113 -1 225 333 0 0 chr20 18855 18927 -66649078 + L2 LINE L2 3187 3258 -14 611 254 182 0 chr20 18985 19260 -66648745 + Charlie2 DNA MER1_type 1 325 -2457 415 265 19 52 chr20 19261 19472 -66648533 + Charlie2 DNA MER1_type 1855 2058 -804 * 948 264 74 7 chr20 19466 19872 -66648133 + Charlie2 DNA MER1_type 2380 2812 -50 2495 58 3 0 chr20 19971 20281 -66647724 - AluY SINE Alu 0 311 1 183 156 0 0 chr20 20627 20659 -66647346 + (TA)n Simple_repeat Simple_repeat 1 32 0 1579 123 67 15 chr20 20677 20946 -66647059 - L1PB4 LINE L1 -9 6147 5865 477 0 0 0 chr20 21307 21360 -66646645 + (TG)n Simple_repeat Simple_repeat 2 54 0 1524 203 81 13 chr20 21463 21848 -66646157 - L1M4 LINE L1 -899 5247 4837 1215 322 40 14 chr20 21857 22351 -66645654 + L1PA16 LINE L1 868 1374 -6200 12724 210 26 44 chr20 22817 28331 -66639674 + L1PA16 LINE L1 2182 7603 -1 2262 220 94 57 chr20 28398 28975 -66639030 - MER77 LTR ERV1 -7 598 1 5205 178 59 25 chr20 30591 31699 -66636306 - L1PA16 LINE L1 -6 6160 4954 2325 110 0 0 chr20 31699 32007 -66635998 - AluSg SINE Alu -2 308 1 5205 178 59 25 chr20 32007 32873 -66635132 - L1PA16 LINE L1 -1212 4954 4118 338 155 84 0 chr20 32878 32949 -66635056 - L1 LINE L1 -1888 4258 4182 1749 244 28 25 chr20 32984 33586 -66634419 - L1M4 LINE L1 -904 5242 4639 884 323 68 17 chr20 33619 34028 -66633977 + L1PBb LINE L1 8 437 -6412 363 364 67 18 chr20 34398 34563 -66633442 + L1PBb LINE L1 694 866 -5983 379 278 83 101 chr20 34601 34878 -66633127 + L1PBb LINE L1 796 1067 -5782 8181 157 95 10 chr20 35085 36776 -66631229 + L1PBb LINE L1 1040 2957 -3891 21 0 0 0 chr20 37622 37643 -66630362 + AT_rich Low_complexity Low_complexity 1 21 0 330 276 88 54 chr20 37724 37963 -66630042 - L1MDa LINE L1 -3987 2553 2307 276 256 116 39 chr20 38136 38343 -66629662 - L1MDa LINE L1 -3736 2804 2582 300 284 123 31 chr20 38544 38836 -66629169 - L1MDa LINE L1 -4640 2081 1763 354 273 169 8 chr20 38937 39186 -66628819 - HAL1 LINE L1 -1220 1287 999 304 297 187 29 chr20 39370 39616 -66628389 + HAL1 LINE L1 1613 1897 -610 248 273 140 47 chr20 40710 40860 -66627145 + MLT1J LTR MaLR 238 401 -110 336 266 35 18 chr20 41275 41388 -66626617 + L2 LINE L2 3199 3313 0 195 229 0 0 chr20 41644 41679 -66626326 - L3 LINE CR1 -93 1484 1450 725 276 126 37 chr20 41856 42709 -66625296 + L1MCc LINE L1 1129 2254 -4868 372 259 37 9 chr20 42724 42832 -66625173 + L1M3d LINE L1 1 111 -5780 3019 227 65 35 chr20 42837 44752 -66623253 + L1MCc LINE L1 2175 4145 -2796 2267 105 0 0 chr20 44760 45055 -66622950 - AluSg SINE Alu -15 295 1 392 283 27 36 chr20 45127 45346 -66622659 - L1M4 LINE L1 -3076 3070 2854 22 35 0 0 chr20 45346 45375 -66622630 + AT_rich Low_complexity Low_complexity 1 29 0 1230 265 51 14 chr20 45503 45668 -66622337 - L1M4 LINE L1 -3372 2774 2617 2306 80 3 13 chr20 45668 45969 -66622036 - AluSg SINE Alu -12 298 1 1230 265 51 14 chr20 45969 46237 -66621768 - L1M4 LINE L1 -3529 2617 2325 1308 125 41 108 chr20 46326 46485 -66621520 + L1MCa LINE L1 1164 1332 -5094 4908 55 16 0 chr20 46485 47107 -66620898 + L1PA8 LINE L1 5541 6172 0 1308 125 41 108 chr20 47107 47316 -66620689 + L1MCa LINE L1 1332 1507 -4919 5793 166 18 12 chr20 47393 48655 -66619350 - L1M1 LINE L1 -871 5432 4057 25629 29 16 1 chr20 48662 54708 -66613297 + L1PA2 LINE L1 1 6172 0 3244 169 35 27 chr20 54708 54776 -66613229 - L1M1 LINE L1 -2079 4067 4001 2282 99 6 10 chr20 54776 55089 -66612916 - AluSq SINE Alu -1 312 1 3244 169 35 27 chr20 55089 55795 -66612210 - L1M1 LINE L1 -2145 4001 3287 1133 164 55 14 chr20 55799 56165 -66611840 + L1M2 LINE L1 2647 3027 -3821 317 175 6 186 chr20 56193 56376 -66611629 + L1PBb LINE L1 711 860 -5344 1053 261 34 0 chr20 56392 56687 -66611318 + L1PA15-16 LINE L1 1265 1569 -5280 689 259 0 0 chr20 56667 56833 -66611172 + L1PA15-16 LINE L1 1336 1501 -5349 * 4654 238 24 76 chr20 56862 57675 -66610330 + L1PA15-16 LINE L1 1271 2125 -4724 2081 129 0 22 chr20 57675 58012 -66609993 - AluSx SINE Alu 0 312 1 4654 238 24 76 chr20 58012 59236 -66608769 + L1PA15-16 LINE L1 2125 3208 -3641 873 114 8 0 chr20 59237 59369 -66608636 + L1PB4 LINE L1 6016 6148 -8 430 215 15 74 chr20 59400 59535 -66608470 + L1ME1 LINE L1 5461 5587 -579 306 73 0 0 chr20 59536 59577 -66608428 + (T)n Simple_repeat Simple_repeat 1 41 0 1567 252 29 41 chr20 59743 60323 -66607682 + L1ME1 LINE L1 5588 6160 -6 357 314 43 24 chr20 62074 62402 -66605603 - L1ME4a LINE L1 -211 5910 5577 438 269 71 25 chr20 63093 63290 -66604715 + L2 LINE L2 3104 3309 -4 195 129 0 0 chr20 64295 64326 -66603679 + (CAA)n Simple_repeat Simple_repeat 1 31 0 821 214 65 0 chr20 64682 64850 -66603155 - MER5A DNA MER1_type -9 180 2 225 194 65 32 chr20 64963 65025 -66602980 - MIR SINE MIR -77 185 122 298 370 92 31 chr20 65691 66072 -66601933 + L2 LINE L2 2554 2957 -357 185 401 28 14 chr20 66623 66765 -66601240 + MIR SINE MIR 8 151 -111 299 362 97 16 chr20 67368 67553 -66600452 + MIR SINE MIR 5 204 -58 456 274 74 112 chr20 68105 68529 -66599476 + L1MDa LINE L1 505 855 -5685 4465 169 39 30 chr20 68774 69880 -66598125 - L1MA9 LINE L1 -30 6282 5167 1059 217 10 20 chr20 69881 70180 -66597825 + L1MA9 LINE L1 4849 5144 -1002 2821 198 90 57 chr20 70192 70243 -66597762 + L1MDa LINE L1 1227 1275 -5265 2317 98 0 19 chr20 70243 70558 -66597447 + AluY SINE Alu 1 309 -2 2821 198 90 57 chr20 70558 71382 -66596623 + L1MDa LINE L1 1275 2152 -4388 1503 159 53 4 chr20 71382 71646 -66596359 - AluJb SINE Alu -1 311 35 2821 198 90 57 chr20 71646 71923 -66596082 + L1MDa LINE L1 2152 2418 -4122 1046 262 36 13 chr20 71924 72221 -66595784 + L1MDa LINE L1 2479 2768 -3772 1708 140 70 7 chr20 72221 72507 -66595498 + AluJb SINE Alu 1 304 -8 1046 262 36 13 chr20 72507 72650 -66595355 + L1MDa LINE L1 2768 3078 -3462 * 1234 251 61 30 chr20 72645 73107 -66594898 + L1MD2 LINE L1 5631 6106 -253 434 223 19 0 chr20 73170 73273 -66594732 + MER3 DNA MER1_type 2 106 -103 632 250 36 12 chr20 73282 73450 -66594555 + MIR SINE MIR 88 259 -3 458 339 79 83 chr20 73502 73998 -66594007 - L1MEd LINE L1 -5373 746 253 329 305 63 26 chr20 74105 74418 -66593587 - L1MDa LINE L1 -3819 2721 2395 277 127 36 0 chr20 75010 75065 -66592940 - L1MB3 LINE L1 0 6183 6127 2832 118 42 16 chr20 75067 75566 -66592439 - L1MA5 LINE L1 0 6300 5789 239 133 22 0 chr20 75634 75679 -66592326 + (TA)n Simple_repeat Simple_repeat 2 47 0 574 176 0 0 chr20 75679 75781 -66592224 - L1 LINE L1 -1197 4949 4848 288 0 0 0 chr20 76629 76661 -66591344 + (TG)n Simple_repeat Simple_repeat 1 32 0 319 286 224 5 chr20 76666 76862 -66591143 + MIR SINE MIR 11 249 -13 192 40 0 0 chr20 78453 78478 -66589527 + (TTG)n Simple_repeat Simple_repeat 3 27 0 377 283 0 0 chr20 78807 78899 -66589106 + L1MD3 LINE L1 6805 6896 -1099 7387 30 0 0 chr20 78899 79814 -66588191 - L1PA2 LINE L1 -1932 4214 3300 9657 30 5 0 chr20 79816 81746 -66586259 + L1PA2 LINE L1 4222 6155 0 1827 199 147 104 chr20 81748 81970 -66586035 + L1MC3 LINE L1 6871 7082 -703 304 259 0 12 chr20 81970 82051 -66585954 + MLT1I LTR MaLR 35 114 -453 1827 199 147 104 chr20 82051 82619 -66585386 + L1MC3 LINE L1 7082 7778 -7 354 312 70 14 chr20 82692 83061 -66584944 - L1M4 LINE L1 -2576 3570 3181 470 246 53 91 chr20 83084 83166 -66584839 + MLT1I LTR MaLR 104 188 -221 2085 131 3 0 chr20 83166 83457 -66584548 + AluSx SINE Alu 7 298 -14 470 246 53 91 chr20 83457 83659 -66584346 + MLT1I LTR MaLR 188 377 -32 21 0 0 0 chr20 83662 83683 -66584322 + AT_rich Low_complexity Low_complexity 1 21 0 471 35 0 0 chr20 83772 83829 -66584176 + (CA)n Simple_repeat Simple_repeat 2 58 0 272 133 0 0 chr20 83874 83919 -66584086 - L1MB7 LINE L1 -31 6153 6109 293 308 48 10 chr20 83919 84127 -66583878 - L1M4 LINE L1 -3021 3125 2910 344 163 36 104 chr20 85189 85248 -66582757 + L1MEc LINE L1 2521 2582 -3958 2237 124 12 15 chr20 85248 85586 -66582419 + MER1B DNA MER1_type 1 337 0 344 163 36 104 chr20 85586 85678 -66582327 + L1MEc LINE L1 2582 2644 -3896 3799 189 72 31 chr20 85684 86298 -66581707 - L1MA9 LINE L1 -38 6274 5602 1458 187 48 31 chr20 86298 86587 -66581418 - AluJo SINE Alu -18 294 1 3799 189 72 31 chr20 86587 86952 -66581053 - L1MA9 LINE L1 -710 5602 5254 642 248 95 5 chr20 87010 87220 -66580785 + L1MEc LINE L1 2712 2940 -3600 2614 229 39 35 chr20 87223 87962 -66580043 + L1M3b LINE L1 1 742 -5539 496 273 9 90 chr20 87943 88188 -66579817 + L1M3b LINE L1 599 794 -5487 * 2100 203 107 39 chr20 88241 88858 -66579147 + L1MD2 LINE L1 5680 6338 -21 700 260 25 15 chr20 89201 89397 -66578608 - MLT1H LTR MaLR -196 353 156 560 133 0 50 chr20 89875 89995 -66578010 - L1PA15 LINE L1 0 6165 6052 289 132 0 0 chr20 90022 90075 -66577930 - L1MA9 LINE L1 -35 6277 6225 867 175 18 0 chr20 90155 90326 -66577679 - L1MA9 LINE L1 -45 6267 6094 2394 77 0 3 chr20 90336 90646 -66577359 - AluY SINE Alu -2 309 1 2112 133 0 0 chr20 90646 90948 -66577057 - AluSx SINE Alu -10 302 1 1099 82 0 0 chr20 90949 91083 -66576922 - AluSq/x SINE Alu -179 134 1 1510 164 40 0 chr20 91083 91381 -66576624 - L1MA9 LINE L1 -209 6103 5794 344 91 36 0 chr20 91383 91438 -66576567 + L1MA9 LINE L1 5731 5787 -393 3385 73 0 9 chr20 91469 91921 -66576084 + LTR7 LTR ERV1 1 448 -2 6478 96 28 41 chr20 91924 93481 -66574524 + HERVH LTR ERV1 1 1855 -5858 5393 107 1 9 chr20 93481 94334 -66573671 + HERVH LTR ERV1 2142 2987 -4726 855 134 13 0 chr20 94328 94477 -66573528 + HERVH LTR ERV1 3140 3290 -4423 * 3245 101 0 10 chr20 94467 94974 -66573031 + HERVH LTR ERV1 3492 3993 -3720 1261 89 0 0 chr20 94976 95156 -66572849 + HERVH LTR ERV1 4488 4667 -3046 * 13577 76 4 7 chr20 95152 97104 -66570901 + HERVH LTR ERV1 5769 7713 0 1872 74 4 11 chr20 97104 97373 -66570632 + LTR7 LTR ERV1 1 267 -183 728 291 191 48 chr20 97870 98935 -66569070 + L2 LINE L2 1758 2974 -340 235 200 53 80 chr20 99119 99194 -66568811 + L2 LINE L2 3185 3257 -15 203 326 128 29 chr20 99342 99514 -66568491 + L3 LINE CR1 875 1063 -514 256 289 72 31 chr20 99680 99777 -66568228 + MIR3 SINE MIR 93 193 -15 195 282 123 58 chr20 100319 100798 -66567207 + L2 LINE L2 1697 2206 -1108 707 221 24 61 chr20 100838 101051 -66566954 + MER58A DNA MER1_type 19 223 -1 2378 101 0 3 chr20 101391 101697 -66566308 - AluSx SINE Alu -7 305 1 273 272 0 48 chr20 101777 101880 -66566125 + L2 LINE L2 2996 3093 -179 2281 97 0 3 chr20 102228 102527 -66565478 - AluSq SINE Alu -15 298 1 336 323 31 0 chr20 102826 102922 -66565083 + L2 LINE L2 3136 3234 -38 1915 106 25 21 chr20 103238 103552 -66564453 - AluY SINE Alu 0 315 1 459 251 29 12 chr20 103582 103753 -66564252 - AluJb SINE Alu -21 291 118 357 256 0 0 chr20 103912 104037 -66563968 + T-rich Low_complexity Low_complexity 1 125 0 289 368 0 23 chr20 104042 104175 -66563830 + CT-rich Low_complexity Low_complexity 6 135 0 4852 124 4 13 chr20 104299 105066 -66562939 + HERVH LTR ERV1 2228 2987 -4726 924 134 13 0 chr20 105060 105209 -66562796 + HERVH LTR ERV1 3140 3290 -4423 * 3494 99 0 10 chr20 105199 105706 -66562299 + HERVH LTR ERV1 3492 3993 -3720 1336 95 16 0 chr20 105708 105898 -66562107 + HERVH LTR ERV1 4488 4680 -3033 * 14645 74 4 7 chr20 105884 107836 -66560169 + HERVH LTR ERV1 5769 7713 0 3562 76 7 7 chr20 107836 108284 -66559721 + LTR7 LTR ERV1 1 448 -2 1177 192 5 5 chr20 108288 108496 -66559509 + L1PA16 LINE L1 5937 6144 -22 1864 156 20 3 chr20 108507 108802 -66559203 + AluJo SINE Alu 1 300 -12 3568 133 70 23 chr20 108836 108901 -66559104 - L1MA8 LINE L1 -170 6121 6061 2080 141 0 3 chr20 108901 109200 -66558805 - AluSq SINE Alu -12 301 4 3568 133 70 23 chr20 109200 109745 -66558260 - L1MA8 LINE L1 -230 6061 5482 * 5230 172 81 3 chr20 109740 110768 -66557237 - L1MA8 LINE L1 -1397 4749 3642 1695 121 4 0 chr20 110877 111126 -66556879 + L1MA4 LINE L1 6046 6295 -5 42 77 0 0 chr20 111127 111218 -66556787 + AT_rich Low_complexity Low_complexity 1 91 0 180 0 0 0 chr20 111224 111244 -66556761 + (TAAAA)n Simple_repeat Simple_repeat 4 23 0 180 0 0 0 chr20 112531 112551 -66555454 + (CA)n Simple_repeat Simple_repeat 2 21 0 13224 204 25 19 chr20 112650 113048 -66554957 + L1PA16 LINE L1 1802 2196 -3970 270 0 0 0 chr20 113048 113078 -66554927 + (GAAAA)n Simple_repeat Simple_repeat 1 30 0 13224 204 25 19 chr20 113078 117013 -66550992 + L1PA16 LINE L1 2196 6157 -9 266 340 61 46 chr20 118483 118680 -66549325 - MIR SINE MIR -52 210 11 183 80 0 0 chr20 120097 120122 -66547883 + (T)n Simple_repeat Simple_repeat 1 25 0 2811 40 0 0 chr20 120122 120448 -66547557 - LTR17 LTR ERV1 -454 326 1 2458 51 0 0 chr20 120448 120740 -66547265 - HERV17 LTR ERV1 0 8626 8335 303 51 0 0 chr20 120730 120769 -66547236 - HERV17 LTR ERV1 -1078 7548 7510 * 24121 47 1 3 chr20 120762 123598 -66544407 - HERV17 LTR ERV1 -2607 6019 3190 1377 103 0 0 chr20 124157 124331 -66543674 - AluSx SINE Alu -138 174 1 198 0 0 0 chr20 124335 124357 -66543648 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 211 342 26 44 chr20 125034 125148 -66542857 + L2 LINE L2 2992 3103 -169 369 43 0 0 chr20 125176 125223 -66542782 + (TG)n Simple_repeat Simple_repeat 1 47 0 5834 93 19 7 chr20 125225 126033 -66541972 - L1PA15 LINE L1 -6 7578 6762 3680 153 2 8 chr20 126032 126664 -66541341 - L1PA12 LINE L1 -1255 6310 5683 * 6384 94 9 48 chr20 126664 127248 -66540757 + L1PA12 LINE L1 6342 6947 -640 2177 121 0 3 chr20 127248 127553 -66540452 + AluSq SINE Alu 1 304 -9 6384 94 9 48 chr20 127553 128127 -66539878 + L1PA12 LINE L1 6947 7453 -134 2106 132 0 0 chr20 128127 128415 -66539590 + AluSx SINE Alu 1 288 -24 6384 94 9 48 chr20 128415 128545 -66539460 + L1PA12 LINE L1 7453 7587 0 1156 113 13 0 chr20 128570 128729 -66539276 - AluSq SINE Alu -7 306 146 11863 176 35 17 chr20 128735 130908 -66537097 - L1PA15 LINE L1 -5341 2224 12 2030 276 178 15 chr20 130908 131095 -66536910 - L2 LINE L2 -10 3303 3148 1935 122 52 0 chr20 131095 131383 -66536622 + AluSq SINE Alu 1 303 -10 2030 276 178 15 chr20 131383 132373 -66535632 - L2 LINE L2 -165 3148 1921 474 340 29 13 chr20 132394 132632 -66535373 - MIR SINE MIR -19 243 2 3562 59 2 0 chr20 132911 133332 -66534673 - L1PA5 LINE L1 0 6154 5733 4392 36 13 0 chr20 133332 133860 -66534145 + L1P LINE L1 4186 4720 -1426 2857 133 6 1 chr20 135132 135617 -66532388 + L1PA14 LINE L1 5631 6131 0 22 35 0 0 chr20 136340 136369 -66531636 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 136626 136647 -66531358 + AT_rich Low_complexity Low_complexity 1 21 0 294 192 19 87 chr20 136648 136752 -66531253 - L1ME LINE L1 -5069 1001 905 * 3279 257 56 26 chr20 136745 137716 -66530289 + L1M4 LINE L1 3191 4206 -1940 2379 117 8 8 chr20 137716 138074 -66529931 - L1MA3 LINE L1 0 6305 5948 3279 257 56 26 chr20 138074 138294 -66529711 + L1M4 LINE L1 4206 4418 -1728 342 208 72 13 chr20 138974 139091 -66528914 - MLT1I LTR MaLR -236 173 46 2405 149 8 0 chr20 139252 139614 -66528391 - MER47A DNA MER2_type -1 365 1 1795 159 28 7 chr20 139729 140012 -66527993 - AluJo SINE Alu -23 289 1 242 317 33 33 chr20 140937 141057 -66526948 - MIR SINE MIR -73 135 16 1103 203 20 0 chr20 141263 141460 -66526545 - MER105 DNA DNA -3 201 1 384 357 116 40 chr20 141735 142419 -66525586 + L2 LINE L2 227 1002 -2312 2267 65 0 4 chr20 142419 142695 -66525310 - AluY SINE Alu 0 311 37 384 357 116 40 chr20 142695 142942 -66525063 + L2 LINE L2 1002 1229 -2085 211 255 0 20 chr20 143004 143055 -66524950 + L2 LINE L2 3200 3249 -64 * 516 255 62 14 chr20 143027 143172 -66524833 + L2 LINE L2 3161 3312 -1 212 343 29 20 chr20 143223 143325 -66524680 - L2 LINE L2 -226 3046 2944 933 254 49 58 chr20 143566 143913 -66524092 + Charlie1a DNA MER1_type 1 344 -1111 712 260 46 23 chr20 144003 144222 -66523783 + MER93a LTR ERV1 61 284 -118 1112 152 0 0 chr20 144227 144392 -66523613 - AluJo/FRAM SINE Alu -15 297 133 1822 132 0 60 chr20 144393 144711 -66523294 - AluJb SINE Alu -13 299 1 659 175 0 32 chr20 144712 144838 -66523167 + MER93a LTR ERV1 281 402 0 1257 236 19 0 chr20 144840 145107 -66522898 + Charlie1a DNA MER1_type 344 615 -840 1072 268 231 25 chr20 145107 145548 -66522457 + MLT1G1 LTR MaLR 56 587 -8 652 215 73 11 chr20 146053 146230 -66521775 + Charlie1 DNA MER1_type 1463 1650 -1111 924 195 52 0 chr20 146969 147123 -66520882 + FAM SINE Alu 1 162 -13 360 148 0 0 chr20 147125 147186 -66520819 + (TG)n Simple_repeat Simple_repeat 2 62 0 322 235 15 125 chr20 147353 147489 -66520516 + L2 LINE L2 3192 3312 -1 2410 93 3 3 chr20 147745 148058 -66519947 - AluSq SINE Alu 0 313 1 1002 216 64 0 chr20 148721 148925 -66519080 + L1M1 LINE L1 562 778 -6787 8906 169 43 36 chr20 148932 150738 -66517267 + L1M1 LINE L1 1680 3497 -4068 801 131 17 17 chr20 150749 150924 -66517081 + GA-rich Low_complexity Low_complexity 1 175 0 4322 194 9 9 chr20 150924 150954 -66517051 + L1M1 LINE L1 3462 3490 -4075 360 0 0 0 chr20 150954 150994 -66517011 + (GGAA)n Simple_repeat Simple_repeat 1 40 0 4322 194 9 9 chr20 150994 151958 -66516047 + L1M1 LINE L1 3490 4461 -3104 8743 119 14 4 chr20 152043 153320 -66514685 + HSMAR2 DNA Mariner 12 1301 -1 383 323 161 0 chr20 153368 153523 -66514482 - MER5A DNA MER1_type 0 189 10 516 244 85 98 chr20 153532 154154 -66513851 + L1M4 LINE L1 2876 3489 -2657 4683 79 7 19 chr20 155235 155853 -66512152 + L1PA12 LINE L1 5552 6161 -7 2234 100 0 17 chr20 156146 156445 -66511560 + AluSx SINE Alu 1 294 -18 1269 78 72 26 chr20 157125 157318 -66510687 - L1PA10 LINE L1 -11 6157 5956 295 219 14 14 chr20 157760 157833 -66510172 + MIR SINE MIR 78 150 -112 981 168 24 64 chr20 159608 159639 -66508366 - MER33 DNA MER1_type -2341 244 213 2351 97 3 0 chr20 159639 159938 -66508067 - AluSg SINE Alu -10 300 1 981 168 24 64 chr20 159938 160156 -66507849 - MER33 DNA MER1_type -2372 213 5 408 336 0 20 chr20 160253 160399 -66507606 + MIR SINE MIR 5 147 -115 869 169 0 0 chr20 160490 160638 -66507367 - L1MA10 LINE L1 -2 6332 6185 2919 159 224 32 chr20 160639 161174 -66506831 + L1 LINE L1 4217 4648 -1498 2255 59 3 21 chr20 161174 161506 -66506499 + AluY SINE Alu 1 327 0 2919 159 224 32 chr20 161506 161743 -66506262 + L1 LINE L1 4648 5138 -1008 358 226 11 11 chr20 162284 162377 -66505628 + MLT1J LTR MaLR 24 116 -395 1601 177 6 51 chr20 162619 162930 -66505075 + AluJo SINE Alu 1 297 -15 2314 114 0 0 chr20 162933 163241 -66504764 + AluSq SINE Alu 1 308 -5 9628 86 30 13 chr20 163481 163575 -66504430 + HSMAR1 DNA Mariner 1 92 -1195 2352 86 3 0 chr20 163575 163876 -66504129 - AluSp SINE Alu -11 302 1 9628 86 30 13 chr20 163876 165046 -66502959 + HSMAR1 DNA Mariner 92 1287 0 1907 185 45 24 chr20 165715 166093 -66501912 + MLT1B LTR MaLR 5 390 0 1140 164 0 44 chr20 166160 166343 -66501662 + FAM SINE Alu 1 175 0 2410 99 0 0 chr20 166390 166694 -66501311 - AluSq SINE Alu -9 304 1 196 243 54 0 chr20 167036 167110 -66500895 - L2 LINE L2 -1908 1406 1329 497 255 60 0 chr20 167579 167728 -66500277 - MIR SINE MIR -23 239 82 2188 90 0 4 chr20 168015 168293 -66499712 + AluSg SINE Alu 26 302 -8 184 384 48 0 chr20 168583 168708 -66499297 + L3 LINE CR1 471 601 -976 1082 140 12 0 chr20 168717 168881 -66499124 + AluSg/x SINE Alu 136 301 -9 367 314 164 5 chr20 168908 169115 -66498890 - MIR SINE MIR -15 247 8 2366 94 0 0 chr20 169225 169522 -66498483 + AluY SINE Alu 1 297 -14 206 367 83 0 chr20 169663 169783 -66498222 + L3 LINE CR1 1056 1185 -392 262 292 92 36 chr20 170522 170913 -66497092 - L1ME4a LINE L1 -3 6118 5706 245 306 92 19 chr20 171532 171738 -66496267 + L1MC4a LINE L1 6047 6267 -1541 1868 213 104 65 chr20 171977 172277 -66495728 + L1MC5 LINE L1 6617 6904 -1057 4106 116 24 2 chr20 172277 172874 -66495131 + L1MA9 LINE L1 5701 6310 -2 1868 213 104 65 chr20 172874 172950 -66495055 + L1MC5 LINE L1 6904 6976 -985 2130 131 6 10 chr20 172950 173262 -66494743 + AluSx SINE Alu 1 311 -1 1868 213 104 65 chr20 173262 173653 -66494352 + L1MC5 LINE L1 6976 7415 -546 440 219 116 0 chr20 174284 174439 -66493566 + L1MC5 LINE L1 7475 7647 -314 27 49 0 0 chr20 174441 174482 -66493523 + AT_rich Low_complexity Low_complexity 1 41 0 2189 117 0 16 chr20 174510 174818 -66493187 - AluSx SINE Alu -9 303 1 3620 179 52 20 chr20 174834 174870 -66493135 - L1MA9 LINE L1 -37 6275 6242 285 29 0 0 chr20 174870 174904 -66493101 + (TA)n Simple_repeat Simple_repeat 1 34 0 261 0 0 0 chr20 174903 174932 -66493073 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 3620 179 52 20 chr20 174904 175629 -66492376 - L1MA9 LINE L1 -70 6242 5519 680 249 25 35 chr20 175657 175858 -66492147 + L1MC5 LINE L1 7715 7913 -48 2754 102 14 3 chr20 175865 176236 -66491769 - THE1C LTR MaLR 0 375 1 180 0 0 0 chr20 176417 176437 -66491568 + (CA)n Simple_repeat Simple_repeat 1 20 0 1178 232 185 25 chr20 176489 176856 -66491149 - MLT1H LTR MaLR 0 549 124 498 33 0 0 chr20 176939 176999 -66491006 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 226 253 120 13 chr20 177454 177604 -66490401 + L1M4 LINE L1 2875 3040 -3106 27 81 0 0 chr20 177767 177829 -66490176 + AT_rich Low_complexity Low_complexity 1 62 0 2201 112 0 3 chr20 177891 178186 -66489819 + AluSc SINE Alu 1 294 -15 2224 112 0 0 chr20 178237 178533 -66489472 + AluSq SINE Alu 1 296 -17 312 327 10 55 chr20 178544 178566 -66489439 + L1MC4a LINE L1 5708 5729 -2079 2380 102 0 0 chr20 178566 178870 -66489135 + AluSx SINE Alu 1 304 -8 312 327 10 55 chr20 178870 179046 -66488959 + L1MC4a LINE L1 5729 5897 -1911 2492 227 58 42 chr20 179074 179364 -66488641 - L1ME1 LINE L1 -15 6151 5867 2729 151 26 7 chr20 179364 179782 -66488223 + MSTA LTR MaLR 1 426 -2 2492 227 58 42 chr20 179782 179956 -66488049 - L1ME1 LINE L1 -299 5867 5697 2066 126 22 0 chr20 179956 180257 -66487748 + AluSx SINE Alu 1 307 0 2492 227 58 42 chr20 180257 180483 -66487522 - L1ME1 LINE L1 -469 5697 5448 200 158 40 53 chr20 180545 180621 -66487384 + A-rich Low_complexity Low_complexity 3 77 0 3671 167 60 19 chr20 180718 181399 -66486606 + MER67C LTR ERV1 2 710 0 375 23 0 0 chr20 181419 181463 -66486542 + (CA)n Simple_repeat Simple_repeat 1 44 0 474 217 104 17 chr20 181465 181580 -66486425 + MER50 LTR ERV1 10 134 -600 2115 131 0 0 chr20 181580 181877 -66486128 + AluSx SINE Alu 7 303 -9 1850 142 37 0 chr20 181877 182173 -66485832 - L1PB4 LINE L1 -233 5923 5617 1091 126 0 0 chr20 182174 182325 -66485680 + AluSg/x SINE Alu 146 296 -14 3728 117 36 6 chr20 182326 182874 -66485131 - MER4E-int LTR ERV1 -6193 565 1 1684 50 0 0 chr20 182874 183072 -66484933 - MER4E LTR ERV1 0 766 569 2997 87 36 42 chr20 183101 183399 -66484606 - MER4E LTR ERV1 -298 468 173 2420 74 0 0 chr20 183399 183698 -66484307 - AluY SINE Alu -12 299 1 2997 87 36 42 chr20 183698 183870 -66484135 - MER4E LTR ERV1 -593 173 1 283 124 0 169 chr20 183870 183957 -66484048 + MLT2C2 LTR ERVL 393 464 0 2997 103 81 48 chr20 183993 184067 -66483938 + L1MA5 LINE L1 5788 5858 -442 2209 127 18 26 chr20 184067 184407 -66483598 - MER1B DNA MER1_type 0 337 1 2997 103 81 48 chr20 184407 184506 -66483499 + L1MA5 LINE L1 5858 5952 -348 2308 98 3 0 chr20 184506 184803 -66483202 + AluSx SINE Alu 1 298 -14 2997 103 81 48 chr20 184803 185125 -66482880 + L1MA5 LINE L1 5952 6300 0 21 36 0 0 chr20 185125 185153 -66482852 + AT_rich Low_complexity Low_complexity 1 28 0 614 226 39 89 chr20 185204 185249 -66482756 + L1MC4 LINE L1 7688 7734 -308 252 0 0 0 chr20 185249 185277 -66482728 + (TA)n Simple_repeat Simple_repeat 2 29 0 614 226 39 89 chr20 185277 185488 -66482517 + L1MC4 LINE L1 7734 7931 -111 21 57 0 0 chr20 185620 185655 -66482350 + AT_rich Low_complexity Low_complexity 1 35 0 189 0 0 0 chr20 185985 186006 -66481999 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 539 29 14 0 chr20 186415 186484 -66481521 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 209 83 28 0 chr20 186485 186521 -66481484 + (CATA)n Simple_repeat Simple_repeat 4 40 0 754 287 78 25 chr20 186601 186922 -66481083 - L1ME LINE L1 -297 5824 5487 191 130 0 22 chr20 187791 187837 -66480168 + (GA)n Simple_repeat Simple_repeat 2 46 0 915 284 68 53 chr20 188963 189417 -66478588 - LTR16B LTR ERVL -2 462 2 2056 224 13 35 chr20 190352 190616 -66477389 - L1ME2 LINE L1 -301 5863 5612 2168 73 4 18 chr20 190616 190930 -66477075 - AluSp SINE Alu 0 325 16 2056 224 13 35 chr20 190930 191181 -66476824 - L1ME2 LINE L1 -552 5612 5357 460 251 19 103 chr20 191203 191350 -66476655 + L1ME1 LINE L1 5915 6030 -136 2564 47 7 0 chr20 191350 191648 -66476357 + AluY SINE Alu 1 300 -11 460 251 19 103 chr20 191648 191771 -66476234 + L1ME1 LINE L1 6030 6162 -4 25 0 0 0 chr20 191773 191798 -66476207 + AT_rich Low_complexity Low_complexity 1 25 0 613 288 68 50 chr20 191910 192335 -66475670 + L1ME LINE L1 5289 5728 -393 * 3669 148 44 0 chr20 192323 192910 -66475095 + L1M1 LINE L1 1 613 -6952 384 22 0 0 chr20 192910 192955 -66475050 + (TG)n Simple_repeat Simple_repeat 1 45 0 252 32 0 0 chr20 192955 192986 -66475019 - AluYa5 SINE Alu -106 195 165 2519 179 155 22 chr20 192986 193579 -66474426 + MER52A LTR ERV1 1 672 -1083 38 0 0 0 chr20 193776 193814 -66474191 + AT_rich Low_complexity Low_complexity 1 38 0 33 0 0 0 chr20 194201 194234 -66473771 + AT_rich Low_complexity Low_complexity 1 33 0 2300 103 3 7 chr20 194444 194754 -66473251 - AluSg SINE Alu -1 309 1 1282 134 216 17 chr20 195042 195297 -66472708 + AluSg1 SINE Alu 2 302 0 1018 204 16 0 chr20 195307 195498 -66472507 + MLT1E2 LTR MaLR 272 465 -161 520 200 27 0 chr20 195658 195768 -66472237 - L1PBa LINE L1 -6316 547 435 * 746 219 6 0 chr20 195764 195924 -66472081 - L1PBa LINE L1 -6697 166 6 505 186 0 0 chr20 195947 196033 -66471972 - L1MA7 LINE L1 -342 5949 5864 346 287 114 31 chr20 196035 196359 -66471646 - L2 LINE L2 -133 3180 2830 962 158 113 0 chr20 196864 197041 -66470964 + L1PB4 LINE L1 5958 6154 -2 2358 82 7 0 chr20 197243 197546 -66470459 + AluSx SINE Alu 1 305 -7 1919 209 125 48 chr20 197776 198344 -66469661 + MER76 LTR ERV 6 629 -59 2008 150 0 0 chr20 198344 198638 -66469367 - AluJb SINE Alu -18 294 1 1919 209 125 48 chr20 198638 198701 -66469304 + MER76 LTR ERV 629 686 -2 607 242 13 46 chr20 198723 198876 -66469129 + MIR SINE MIR 61 208 -54 230 305 86 86 chr20 198999 199117 -66468888 + MLT1K LTR MaLR 125 242 -346 2130 130 0 7 chr20 199117 199418 -66468587 - AluSx SINE Alu -13 299 1 230 305 86 86 chr20 199418 199673 -66468332 + MLT1K LTR MaLR 241 498 -90 790 261 29 0 chr20 199782 199989 -66468016 - LTR16A LTR ERVL -8 442 230 492 208 0 0 chr20 200408 200514 -66467491 + GA-rich Low_complexity Low_complexity 2 107 0 423 83 0 0 chr20 200861 200921 -66467084 + (CA)n Simple_repeat Simple_repeat 1 60 0 202 313 152 0 chr20 201028 201127 -66466878 + MIR SINE MIR 22 135 -127 332 233 242 0 chr20 201168 201288 -66466717 + MIR SINE MIR 114 262 0 229 111 48 63 chr20 201579 201642 -66466363 + L1MC5 LINE L1 7870 7931 -30 719 303 82 64 chr20 201645 201792 -66466213 + L2 LINE L2 2214 2357 -957 1625 138 52 11 chr20 201792 202083 -66465922 - AluJo SINE Alu 0 305 4 719 303 82 64 chr20 202083 202409 -66465596 + L2 LINE L2 2357 2708 -606 1933 166 0 0 chr20 202409 202705 -66465300 - AluJb SINE Alu -16 296 1 719 303 82 64 chr20 202705 202945 -66465060 + L2 LINE L2 2708 2942 -372 281 214 0 57 chr20 202953 203023 -66464982 + MER5A DNA MER1_type 9 74 -115 2183 125 0 3 chr20 203024 203327 -66464678 + AluSx SINE Alu 1 302 -10 345 47 0 0 chr20 203327 203370 -66464635 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 507 127 56 8 chr20 203370 203496 -66464509 + GA-rich Low_complexity Low_complexity 1 132 0 289 248 229 0 chr20 203496 203601 -66464404 + MER5A DNA MER1_type 61 189 0 431 230 11 0 chr20 204120 204207 -66463798 + L2 LINE L2 2976 3063 -209 2352 90 0 40 chr20 204226 204547 -66463458 - AluSg1 SINE Alu -1 308 1 245 341 0 0 chr20 204765 204850 -66463155 + GA-rich Low_complexity Low_complexity 3 87 0 263 275 106 56 chr20 205132 205274 -66462731 - MIR3 SINE MIR -12 196 48 312 288 42 17 chr20 207012 207130 -66460875 + MIR3 SINE MIR 12 132 -76 211 196 107 0 chr20 207329 207385 -66460620 + MIR SINE MIR 34 95 -113 425 234 135 14 chr20 207394 207535 -66460470 + MIR SINE MIR 36 193 -69 281 232 72 0 chr20 207981 208050 -66459955 + MIR SINE MIR 139 212 -50 993 106 0 0 chr20 208372 208552 -66459453 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 21 57 0 0 chr20 208832 208867 -66459138 + GC_rich Low_complexity Low_complexity 1 35 0 337 309 67 6 chr20 208942 209107 -66458898 + MER104 DNA Tc2 6 180 0 2236 69 4 0 chr20 209120 209394 -66458611 + AluSg SINE Alu 1 275 -35 180 0 0 0 chr20 209400 209420 -66458585 + (TAA)n Simple_repeat Simple_repeat 2 21 0 192 189 54 0 chr20 209584 209621 -66458384 - MIR SINE MIR -153 109 71 530 256 89 49 chr20 209828 210074 -66457931 - MIR SINE MIR 0 262 7 500 328 22 6 chr20 210120 210300 -66457705 + MIR SINE MIR 10 192 -70 1712 196 0 3 chr20 210303 210614 -66457391 + AluJo SINE Alu 1 310 0 1113 168 0 0 chr20 210621 210788 -66457217 + AluJo SINE Alu 120 286 -26 459 243 52 95 chr20 210983 211127 -66456878 - MIR SINE MIR 0 262 128 1636 176 48 4 chr20 211127 211399 -66456606 + AluJb SINE Alu 1 284 -28 459 243 52 95 chr20 211399 211464 -66456541 - MIR SINE MIR -134 128 62 546 328 74 11 chr20 211594 211878 -66456127 + L2 LINE L2 3012 3313 0 190 317 0 0 chr20 211916 211957 -66456048 + MIR SINE MIR 15 55 -207 2227 110 0 3 chr20 212019 212311 -66455694 + AluSx SINE Alu 1 291 -21 2275 112 0 0 chr20 212740 213034 -66454971 - AluSx SINE Alu -18 294 1 567 286 22 32 chr20 213152 213337 -66454668 + MIR SINE MIR 48 230 -32 249 270 0 0 chr20 213940 214003 -66454002 + MIR SINE MIR 6 68 -194 2081 119 14 3 chr20 214004 214289 -66453716 + AluSx SINE Alu 1 288 -24 23 33 0 0 chr20 214289 214319 -66453686 + AT_rich Low_complexity Low_complexity 1 30 0 768 278 0 28 chr20 214319 214531 -66453474 + MIR SINE MIR 57 262 0 1906 106 31 0 chr20 215048 215304 -66452701 - AluSq SINE Alu -49 264 1 337 143 14 0 chr20 215594 215664 -66452341 - L1MD2 LINE L1 0 6359 6289 2174 113 0 39 chr20 215665 215976 -66452029 + AluSx SINE Alu 1 299 -13 255 125 0 0 chr20 215976 216016 -66451989 + (GGGGA)n Simple_repeat Simple_repeat 1 40 0 4873 210 13 37 chr20 216039 217077 -66450928 - L1MC4a LINE L1 -27 7781 6720 2073 113 70 0 chr20 217077 217361 -66450644 + AluSx SINE Alu 1 304 -8 4873 210 13 37 chr20 217361 217743 -66450262 - L1MC4a LINE L1 -1088 6720 4825 297 232 11 11 chr20 218191 218286 -66449719 + MER20B DNA MER1_type 653 747 -36 465 230 141 1 chr20 218286 218415 -66449590 - MIR SINE MIR -62 146 40 1415 272 25 31 chr20 218460 218905 -66449100 + MLT1J2 LTR MaLR 1 442 -8 576 278 119 16 chr20 219139 219333 -66448672 + MIR SINE MIR 49 262 0 243 268 134 0 chr20 219507 219589 -66448416 - MIR SINE MIR -73 135 43 189 0 0 0 chr20 219994 220015 -66447990 + (T)n Simple_repeat Simple_repeat 1 21 0 1566 196 206 141 chr20 220286 220669 -66447336 + L2 LINE L2 1277 1634 -1680 687 228 0 24 chr20 220669 220836 -66447169 + AluJb SINE Alu 136 298 -14 1566 196 206 141 chr20 220836 221485 -66446520 + L2 LINE L2 1634 2553 -761 2417 88 0 13 chr20 221950 222257 -66445748 + AluSq SINE Alu 1 303 -10 803 268 78 70 chr20 222269 222746 -66445259 + MLT1L LTR MaLR 3 488 -127 1566 199 10 30 chr20 222746 223043 -66444962 + AluJo SINE Alu 1 291 -21 803 268 78 70 chr20 223043 223169 -66444836 + MLT1L LTR MaLR 488 611 -4 508 237 21 82 chr20 223179 223373 -66444632 + MLT1J LTR MaLR 330 511 0 2403 91 3 0 chr20 223504 223801 -66444204 - AluSp SINE Alu -15 298 1 784 301 96 16 chr20 224648 225192 -66442813 + L1M4 LINE L1 4117 4703 -1443 466 304 72 24 chr20 225207 225414 -66442591 + MER102a DNA MER1_type 108 324 -6 236 361 9 0 chr20 225563 225671 -66442334 - L2 LINE L2 -2482 832 724 2565 50 3 0 chr20 225822 226124 -66441881 + AluY SINE Alu 1 303 -8 266 222 198 24 chr20 226163 226289 -66441716 + MIR SINE MIR 96 243 -19 23 0 0 0 chr20 226941 226964 -66441041 + GC_rich Low_complexity Low_complexity 1 23 0 29 0 0 0 chr20 227073 227102 -66440903 + GC_rich Low_complexity Low_complexity 1 29 0 25 51 0 0 chr20 227231 227270 -66440735 + GC_rich Low_complexity Low_complexity 1 39 0 21 36 0 0 chr20 227475 227503 -66440502 + GC_rich Low_complexity Low_complexity 1 28 0 276 329 13 0 chr20 228598 228677 -66439328 + L2 LINE L2 3185 3264 -8 591 280 32 11 chr20 228917 229106 -66438899 - MIR3 SINE MIR 0 208 16 230 353 39 0 chr20 229950 230052 -66437953 + MER5B DNA MER1_type 66 171 -7 2373 93 0 0 chr20 231112 231403 -66436602 - AluSx SINE Alu -21 291 1 336 320 69 46 chr20 231431 231606 -66436399 - L2 LINE L2 -221 3051 2873 321 265 247 0 chr20 231702 231872 -66436133 - L2 LINE L2 0 3313 3102 947 326 64 29 chr20 232629 233188 -66434817 - L2 LINE L2 -513 2801 2223 595 212 72 63 chr20 233189 233411 -66434594 + MER112 DNA MER1_type 3 226 -34 322 319 47 0 chr20 233489 233658 -66434347 - L2 LINE L2 -1216 2098 1922 2582 44 7 0 chr20 233659 233954 -66434051 + AluY SINE Alu 1 297 -14 1535 132 0 14 chr20 234309 234521 -66433484 + AluSx SINE Alu 1 209 -103 4257 110 41 58 chr20 234587 235350 -66432655 + LTR1 LTR ERV1 36 785 0 598 106 0 21 chr20 235352 235446 -66432559 + AluSx SINE Alu 208 299 -13 1063 167 0 6 chr20 235666 235834 -66432171 - AluJo/FRAM SINE Alu -17 295 129 2307 60 0 106 chr20 235837 236185 -66431820 - AluY SINE Alu 0 311 1 476 176 0 38 chr20 236185 236316 -66431689 + CT-rich Low_complexity Low_complexity 1 126 0 760 201 145 52 chr20 236318 236567 -66431438 - AluJo SINE Alu 0 312 41 422 240 42 152 chr20 236596 236813 -66431192 + L1MC4a LINE L1 5834 6026 -1782 1741 165 33 0 chr20 237027 237332 -66430673 + AluJb SINE Alu 1 314 0 509 303 90 31 chr20 237587 237944 -66430061 + L2 LINE L2 2934 3311 -2 1553 269 95 15 chr20 238312 238858 -66429147 + MER115 DNA AcHobo 89 678 -15 475 248 65 13 chr20 238865 239018 -66428987 + MIR SINE MIR 63 223 -39 472 245 123 42 chr20 239170 239382 -66428623 - MIR SINE MIR -1 261 33 221 143 0 41 chr20 239556 239605 -66428400 + (TCCC)n Simple_repeat Simple_repeat 1 47 0 21 0 0 0 chr20 240150 240171 -66427834 + AT_rich Low_complexity Low_complexity 1 21 0 319 108 96 48 chr20 240685 240768 -66427237 - L1MC3 LINE L1 -6 7779 7693 1437 164 0 0 chr20 240773 240998 -66427007 - AluJb SINE Alu -4 308 84 885 157 8 111 chr20 241002 241237 -66426768 - L1MC3 LINE L1 -100 7685 7475 286 282 35 0 chr20 241312 241397 -66426608 - MLT1F1 LTR MaLR -443 124 37 2206 122 66 34 chr20 241398 241807 -66426198 - L1MC3 LINE L1 -687 7098 6677 213 39 0 0 chr20 241808 241834 -66426171 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 282 191 0 0 chr20 241834 241881 -66426124 - Alu SINE Alu -11 289 243 269 160 0 0 chr20 241994 242044 -66425961 + MER97a DNA MER1_type? 45 94 -800 1401 150 8 43 chr20 242046 242280 -66425725 - AluJo SINE Alu -86 226 1 3095 178 64 31 chr20 242281 242685 -66425320 - L1MC3 LINE L1 -1093 6692 6303 2123 128 0 28 chr20 242685 243005 -66425000 - AluJb SINE Alu -1 311 1 3095 178 64 31 chr20 243005 243229 -66424776 - L1MC3 LINE L1 -1482 6303 5745 249 225 144 38 chr20 243229 243389 -66424616 - L1MB5 LINE L1 -122 6052 5876 210 268 98 18 chr20 243396 243508 -66424497 - MIR SINE MIR -69 193 73 927 181 23 0 chr20 243579 243750 -66424255 - FAM SINE Alu 0 175 1 240 232 18 18 chr20 243753 243809 -66424196 - Charlie5 DNA MER1_type -2547 65 10 2276 107 0 0 chr20 243817 244106 -66423899 - AluSc SINE Alu -20 289 1 904 179 0 0 chr20 244152 244297 -66423708 + FRAM SINE Alu 21 165 -11 1831 140 49 3 chr20 244333 244618 -66423387 - AluJo SINE Alu -5 307 10 2259 122 3 0 chr20 244621 244933 -66423072 - AluSp SINE Alu 0 313 1 2014 106 33 0 chr20 245158 245463 -66422542 - AluY SINE Alu 0 314 1 1936 149 17 3 chr20 245472 245761 -66422244 - AluJo SINE Alu -19 293 1 2040 128 12 53 chr20 245761 246160 -66421845 + L1MB8 LINE L1 5790 6172 -6 1934 150 3 14 chr20 246340 246634 -66421371 + AluJo SINE Alu 1 291 -21 498 296 18 6 chr20 246740 246909 -66421096 - L2 LINE L2 -252 3061 2891 438 240 7 52 chr20 246947 246977 -66421028 + L1ME LINE L1 5639 5669 -452 2190 112 11 0 chr20 246977 247104 -66420901 + AluSc SINE Alu 1 125 -184 2389 69 0 23 chr20 247104 247407 -66420598 + AluY SINE Alu 1 296 -15 2190 112 11 0 chr20 247407 247566 -66420439 + AluSc SINE Alu 125 290 -19 438 240 7 52 chr20 247566 247665 -66420340 + L1ME LINE L1 5669 5763 -358 1926 122 4 0 chr20 247665 247927 -66420078 + AluSq SINE Alu 35 297 -16 438 240 7 52 chr20 247927 247950 -66420055 + L1ME LINE L1 5763 5785 -336 1901 170 0 3 chr20 248101 248395 -66419610 + AluJb SINE Alu 1 293 -19 2265 98 0 17 chr20 248395 248692 -66419313 + AluSg SINE Alu 1 292 -18 2275 80 4 0 chr20 248792 249067 -66418938 + AluSx SINE Alu 1 276 -36 357 43 0 0 chr20 249067 249114 -66418891 + (CA)n Simple_repeat Simple_repeat 1 47 0 2262 110 3 0 chr20 249410 249702 -66418303 + AluSg SINE Alu 1 293 -17 2685 199 26 17 chr20 249868 250410 -66417595 - MLT1F1 LTR MaLR 0 567 21 2495 59 0 13 chr20 250411 250718 -66417287 + AluY SINE Alu 1 303 -8 571 269 161 34 chr20 251027 251173 -66416832 + L2 LINE L2 2911 3037 -276 1954 162 10 0 chr20 251173 251475 -66416530 - AluJb SINE Alu -7 305 1 571 269 161 34 chr20 251475 251490 -66416515 + L2 LINE L2 3037 3049 -264 1640 174 8 0 chr20 251490 251755 -66416250 - AluJo SINE Alu -45 267 1 571 269 161 34 chr20 251755 251945 -66416060 + L2 LINE L2 3049 3308 -5 1610 167 41 11 chr20 252213 252513 -66415492 - AluJb SINE Alu 0 314 7 1984 127 39 7 chr20 252977 253260 -66414745 - AluSx SINE Alu -16 296 5 402 258 86 0 chr20 253274 253402 -66414603 - MIR SINE MIR -14 248 110 33 85 0 0 chr20 254895 254977 -66413028 + GC_rich Low_complexity Low_complexity 1 82 0 33 25 0 0 chr20 254997 255037 -66412968 + GC_rich Low_complexity Low_complexity 1 40 0 31 26 0 0 chr20 255232 255270 -66412735 + GC_rich Low_complexity Low_complexity 1 38 0 30 69 0 0 chr20 255393 255451 -66412554 + GC_rich Low_complexity Low_complexity 1 58 0 22 56 0 0 chr20 255705 255741 -66412264 + GC_rich Low_complexity Low_complexity 1 36 0 23 0 0 0 chr20 255822 255845 -66412160 + GC_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr20 255984 256009 -66411996 + GC_rich Low_complexity Low_complexity 1 25 0 195 114 0 0 chr20 256023 256058 -66411947 + (GGA)n Simple_repeat Simple_repeat 1 35 0 180 0 0 0 chr20 257951 257971 -66410034 + (T)n Simple_repeat Simple_repeat 1 20 0 602 248 189 4 chr20 258319 258589 -66409416 - MER102b DNA MER1_type -1 340 21 292 254 295 8 chr20 258626 258748 -66409257 + MIR SINE MIR 16 172 -90 747 264 100 47 chr20 259360 259701 -66408304 + LTR16A LTR ERVL 92 450 0 193 179 0 0 chr20 260036 260075 -66407930 + MIR SINE MIR 81 119 -89 2287 171 51 127 chr20 260385 260838 -66407167 - MLT1E1 LTR MaLR 0 654 273 2300 90 3 3 chr20 260838 261149 -66406856 + AluSx SINE Alu 1 311 -1 2287 171 51 127 chr20 261149 261403 -66406602 - MLT1E1 LTR MaLR -381 273 1 961 176 0 34 chr20 261403 261579 -66406426 + AluJo SINE Alu 20 189 -123 1558 259 121 50 chr20 261584 262247 -66405758 + L2 LINE L2 2223 2982 -331 2062 123 3 7 chr20 262247 262548 -66405457 + AluSx SINE Alu 1 300 -12 1558 259 121 50 chr20 262548 262810 -66405195 + L2 LINE L2 2982 3224 -89 1770 148 7 20 chr20 262871 263169 -66404836 + AluJo SINE Alu 1 294 -18 319 364 52 44 chr20 263187 263437 -66404568 - L2 LINE L2 -26 3246 2995 1541 237 205 20 chr20 263437 263935 -66404070 + MLT1G LTR MaLR 1 590 0 829 173 0 0 chr20 264148 264281 -66403724 - FLAM_C SINE Alu 0 133 1 2134 121 0 0 chr20 264290 264587 -66403418 - AluSx SINE Alu -15 297 1 189 324 141 0 chr20 264589 264660 -66403345 + L2 LINE L2 2693 2773 -541 436 185 7 104 chr20 264813 264897 -66403108 + MIR3 SINE MIR 84 152 -56 2201 115 0 6 chr20 264897 265210 -66402795 - AluSx SINE Alu -1 311 1 436 185 7 104 chr20 265210 265260 -66402745 + MIR3 SINE MIR 152 205 -3 1214 56 11 11 chr20 265603 265781 -66402224 + (TTC)n Simple_repeat Simple_repeat 3 180 0 232 193 20 20 chr20 265792 265811 -66402194 - Alu SINE Alu -260 40 22 1666 109 4 0 chr20 265811 266049 -66401956 - AluSg/x SINE Alu 0 310 72 232 193 20 20 chr20 266049 266089 -66401916 - Alu SINE Alu -277 23 1 1887 146 0 10 chr20 266091 266392 -66401613 - AluSx SINE Alu -14 298 1 267 133 22 0 chr20 266392 266437 -66401568 - U6 snRNA snRNA -61 46 1 716 260 0 17 chr20 266479 266660 -66401345 - L2 LINE L2 0 3313 3136 476 239 89 33 chr20 266729 266909 -66401096 - LTR33A LTR ERVL -332 191 2 2225 78 3 0 chr20 267001 267283 -66400722 + AluSp SINE Alu 1 283 -30 4068 168 12 12 chr20 267337 267849 -66400156 - L1MB3 LINE L1 -11 6172 5658 1718 147 56 0 chr20 267849 268011 -66399994 - AluSx SINE Alu -11 301 115 390 21 0 0 chr20 268011 268058 -66399947 + (TG)n Simple_repeat Simple_repeat 2 48 0 1718 147 56 0 chr20 268058 268180 -66399825 - AluSx SINE Alu -197 115 1 4068 168 12 12 chr20 268180 268394 -66399611 - L1MB3 LINE L1 -524 5659 5446 1541 154 0 8 chr20 268440 268687 -66399318 - AluJo SINE Alu -47 265 21 2056 117 3 0 chr20 268763 269053 -66398952 + AluSq SINE Alu 1 291 -22 1229 91 24 62 chr20 269420 269630 -66398375 - AluSc SINE Alu -14 295 94 337 0 41 20 chr20 269630 269679 -66398326 + (TTTC)n Simple_repeat Simple_repeat 2 51 0 1967 134 40 0 chr20 269684 269982 -66398023 - AluSx SINE Alu 0 312 3 664 317 66 8 chr20 270106 270349 -66397656 - MIR SINE MIR 0 262 6 195 162 0 0 chr20 270546 270583 -66397422 + (CA)n Simple_repeat Simple_repeat 1 37 0 247 305 98 18 chr20 270624 270788 -66397217 + L2 LINE L2 1853 2029 -1285 368 141 16 0 chr20 270939 271003 -66397002 - AluJo SINE Alu -3 298 234 901 159 0 59 chr20 271003 271173 -66396832 - AluJo SINE Alu -152 160 1 741 237 133 37 chr20 271173 271631 -66396374 + MLT1G LTR MaLR 19 538 -4 976 236 167 25 chr20 271640 271958 -66396047 - MLT1A1 LTR MaLR -2 363 1 2326 97 0 3 chr20 272039 272350 -66395655 - AluSg SINE Alu 0 310 1 1235 275 154 9 chr20 272350 272798 -66395207 + MLT1K LTR MaLR 34 546 -42 300 70 0 0 chr20 273019 273062 -66394943 + (TC)n Simple_repeat Simple_repeat 1 43 0 2296 77 0 13 chr20 273248 273548 -66394457 + AluSc SINE Alu 1 296 -13 309 423 621 0 chr20 273663 273833 -66394172 - L1MC4a LINE L1 -302 5819 5795 2192 211 42 84 chr20 273833 274081 -66393924 - MLT1G LTR MaLR 0 590 333 1841 85 8 0 chr20 274081 274329 -66393676 - AluSx SINE Alu -62 250 1 2192 211 42 84 chr20 274329 274696 -66393309 - MLT1G LTR MaLR -257 333 1 309 423 621 0 chr20 274696 274758 -66393247 - L1MC4a LINE L1 -326 5795 5685 582 338 87 0 chr20 274758 275024 -66392981 + L2 LINE L2 2564 2852 -462 276 30 0 0 chr20 275066 275099 -66392906 + (CA)n Simple_repeat Simple_repeat 1 33 0 188 167 103 90 chr20 275099 275177 -66392828 + MIR SINE MIR 184 262 0 278 240 27 13 chr20 275188 275263 -66392742 - L2 LINE L2 -9 3304 3229 2068 134 0 6 chr20 275276 275590 -66392415 + AluJb SINE Alu 1 312 0 196 379 0 0 chr20 275720 275786 -66392219 - MIR SINE MIR -85 123 58 22 35 0 0 chr20 276487 276516 -66391489 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 277317 277338 -66390667 + GC_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr20 277918 277962 -66390043 + (TG)n Simple_repeat Simple_repeat 2 45 0 587 341 0 0 chr20 278635 278802 -66389203 - MIR SINE MIR -83 179 13 236 210 48 0 chr20 278826 278888 -66389117 - MIR SINE MIR -11 251 187 228 222 25 62 chr20 279358 279439 -66388566 - MLT1K LTR MaLR -1 587 510 2118 109 3 10 chr20 279501 279626 -66388379 + AluSx SINE Alu 11 135 -177 2106 105 0 20 chr20 279626 279932 -66388073 + AluSg SINE Alu 1 300 -10 2118 109 3 10 chr20 279932 280110 -66387895 + AluSx SINE Alu 135 312 0 1995 126 0 0 chr20 280400 280685 -66387320 + AluSq SINE Alu 21 305 -8 1860 159 10 0 chr20 280698 280994 -66387011 + AluJo SINE Alu 13 311 -1 709 228 95 4 chr20 281012 281253 -66386752 + L1M4 LINE L1 4363 4625 -1521 185 129 0 0 chr20 281258 281289 -66386716 + L2 LINE L2 3023 3053 -260 279 319 129 0 chr20 281420 281536 -66386469 - MLT1K LTR MaLR -290 298 168 273 204 86 32 chr20 281921 282014 -66385991 - L2 LINE L2 -16 3256 3159 619 250 42 118 chr20 282029 282361 -66385644 - L2 LINE L2 0 3272 2966 235 308 13 0 chr20 283355 283433 -66384572 + MIR3 SINE MIR 82 160 -48 214 294 98 10 chr20 283637 283739 -66384266 - MIR SINE MIR -62 146 36 364 282 114 0 chr20 284360 284433 -66383572 - MIR SINE MIR -20 242 179 2157 109 3 0 chr20 284433 284737 -66383268 - AluSx SINE Alu -5 307 3 364 282 114 0 chr20 284737 284794 -66383211 - MIR SINE MIR -83 179 97 2269 64 0 58 chr20 284802 285131 -66382874 - AluY SINE Alu -1 310 1 1871 135 22 16 chr20 285141 285453 -66382552 - L1PB2 LINE L1 0 6151 5838 2238 100 0 0 chr20 285494 285793 -66382212 + AluSx SINE Alu 1 299 -13 334 277 25 34 chr20 285963 286082 -66381923 - MIR SINE MIR 0 262 145 * 1486 248 109 53 chr20 286074 286863 -66381142 + L2 LINE L2 2240 3074 -239 2278 97 3 0 chr20 286867 287178 -66380827 + AluSp SINE Alu 1 312 -1 2133 121 0 0 chr20 287190 287488 -66380517 + AluSx SINE Alu 1 298 -14 280 240 146 12 chr20 287513 287688 -66380317 + L1ME LINE L1 5571 5783 -338 1237 122 148 97 chr20 287689 287967 -66380038 + AluJo SINE Alu 1 292 -20 2048 101 50 0 chr20 288000 288298 -66379707 - AluSp SINE Alu 0 313 1 1006 146 5 61 chr20 288301 288456 -66379549 + L1MD3 LINE L1 7077 7218 -777 728 181 0 8 chr20 288456 288583 -66379422 - FLAM_A SINE Alu -7 126 1 1006 146 5 61 chr20 288583 288640 -66379365 + L1MD3 LINE L1 7218 7277 -718 640 240 0 0 chr20 288641 288766 -66379239 + MLT1F1 LTR MaLR 1 125 -442 1501 176 95 0 chr20 288766 289062 -66378943 + L1MD3 LINE L1 7404 7727 -268 406 200 20 59 chr20 289046 289147 -66378858 + L1MD3 LINE L1 6260 6351 -8 * 2278 96 0 0 chr20 289150 289451 -66378554 + AluSx SINE Alu 1 301 -11 2180 84 7 10 chr20 289844 290141 -66377864 - AluSp SINE Alu -17 296 1 401 275 101 57 chr20 290307 290488 -66377517 + MIR SINE MIR 67 262 0 257 364 11 0 chr20 290536 290624 -66377381 - L2 LINE L2 -68 3204 3116 584 308 87 0 chr20 290701 290896 -66377109 - MIR SINE MIR -21 241 30 2179 104 19 10 chr20 291336 291645 -66376360 + AluSx SINE Alu 1 312 0 255 294 176 0 chr20 291645 291747 -66376258 - MIR3 SINE MIR -85 123 4 197 222 16 0 chr20 292306 292369 -66375636 + (TGAA)n Simple_repeat Simple_repeat 3 66 0 1645 149 34 0 chr20 292387 292683 -66375322 - AluJb SINE Alu 0 311 7 250 327 73 0 chr20 292693 292803 -66375202 - L2 LINE L2 0 3272 3155 227 269 0 0 chr20 292918 292970 -66375035 + (TG)n Simple_repeat Simple_repeat 1 52 0 275 263 111 0 chr20 293404 293503 -66374502 + MIR SINE MIR 81 190 -72 1048 252 87 47 chr20 293779 293912 -66374093 - L2 LINE L2 -1 3312 3186 2059 115 0 10 chr20 293912 294216 -66373789 + AluSx SINE Alu 1 301 -11 1048 252 87 47 chr20 294216 294506 -66373499 - L2 LINE L2 -127 3186 2872 592 304 40 9 chr20 295191 295228 -66372777 + L1MC4a LINE L1 5406 5440 -2368 2160 83 0 14 chr20 295228 295518 -66372487 - AluSq SINE Alu -4 309 24 592 304 40 9 chr20 295518 295707 -66372298 + L1MC4a LINE L1 5440 5639 -2169 588 82 0 0 chr20 295745 295844 -66372161 + AluSp/q SINE Alu 211 309 0 774 259 50 29 chr20 295844 296138 -66371867 + L1MC4a LINE L1 5628 5945 -297 236 63 32 79 chr20 296284 296347 -66371658 + (TATAA)n Simple_repeat Simple_repeat 4 63 0 2105 91 0 7 chr20 296362 296684 -66371321 + AluSp SINE Alu 3 322 0 220 329 0 14 chr20 296792 296865 -66371140 + MIR SINE MIR 42 113 -95 2714 247 146 37 chr20 297178 297317 -66370688 + L2 LINE L2 1693 1815 -1498 1989 130 3 0 chr20 297317 297601 -66370404 - AluJb SINE Alu -27 285 1 2714 247 146 37 chr20 297601 297709 -66370296 + L2 LINE L2 1815 1910 -1403 2284 97 0 3 chr20 297709 298017 -66369988 - AluSc SINE Alu -2 307 1 2714 247 146 37 chr20 298017 298670 -66369335 + L2 LINE L2 1910 2491 -822 763 197 0 29 chr20 298670 298807 -66369198 + AluJo/FLAM SINE Alu 1 133 -169 2247 95 3 3 chr20 298809 299114 -66368891 + AluSx SINE Alu 1 305 -7 2714 247 146 37 chr20 299114 299529 -66368476 + L2 LINE L2 2491 2859 -454 1835 162 0 3 chr20 299529 299831 -66368174 - AluJb SINE Alu -11 301 1 2714 247 146 37 chr20 299831 299958 -66368047 + L2 LINE L2 2859 3313 0 614 264 35 25 chr20 300134 300331 -66367674 - L2 LINE L2 -1 3312 3114 225 83 0 0 chr20 301556 301592 -66366413 + (GGAA)n Simple_repeat Simple_repeat 3 38 0 534 277 40 30 chr20 301924 301976 -66366029 + MIR SINE MIR 11 61 -201 2004 107 21 0 chr20 301976 302257 -66365748 + AluSx SINE Alu 1 287 -25 534 277 40 30 chr20 302257 302406 -66365599 + MIR SINE MIR 61 214 -48 306 220 0 77 chr20 302516 302607 -66365398 - MIR SINE MIR 0 262 179 1044 174 0 0 chr20 302632 302799 -66365206 + AluJb SINE Alu 137 303 -9 192 77 0 0 chr20 302800 302826 -66365179 + (GGAA)n Simple_repeat Simple_repeat 1 26 0 324 316 86 7 chr20 302851 302990 -66365015 - MIR SINE MIR -85 177 28 * 396 279 105 23 chr20 302936 303108 -66364897 + MIR SINE MIR 11 196 -66 955 270 15 68 chr20 303412 303451 -66364554 + MER113 DNA MER1_type? 73 113 -408 275 48 0 24 chr20 303451 303493 -66364512 + (TTTA)n Simple_repeat Simple_repeat 4 44 0 1913 147 0 0 chr20 303493 303772 -66364233 - AluSx SINE Alu -33 279 1 955 270 15 68 chr20 303772 304015 -66363990 + MER113 DNA MER1_type? 112 366 -155 2054 88 36 20 chr20 304015 304135 -66363870 + AluY SINE Alu 1 118 -193 186 43 0 0 chr20 304135 304158 -66363847 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2054 88 36 20 chr20 304158 304343 -66363662 + AluY SINE Alu 118 311 0 955 270 15 68 chr20 304343 304362 -66363643 + MER113 DNA MER1_type? 366 384 -137 2233 98 3 0 chr20 304362 304668 -66363337 + AluY SINE Alu 1 307 -4 955 270 15 68 chr20 304668 304837 -66363168 + MER113 DNA MER1_type? 384 521 0 301 284 17 60 chr20 304846 304962 -66363043 - MIR3 SINE MIR -48 160 50 1906 132 0 16 chr20 305175 305510 -66362495 + AluSx SINE Alu 1 312 0 620 203 23 0 chr20 305680 305808 -66362197 - MIR SINE MIR -44 218 88 250 280 40 0 chr20 305862 305937 -66362068 - MIR SINE MIR -68 194 117 2310 147 45 33 chr20 306072 306494 -66361511 - MSTC LTR MaLR -1 427 1 385 163 0 35 chr20 306494 306580 -66361425 + Charlie5 DNA MER1_type 18 100 -2512 2294 119 0 0 chr20 306581 306884 -66361121 - AluSg SINE Alu -7 303 1 194 252 92 130 chr20 307060 307108 -66360897 + MIR SINE MIR 24 72 -190 2337 95 7 3 chr20 307108 307412 -66360593 - AluSq SINE Alu -8 305 1 194 252 92 130 chr20 307412 307494 -66360511 + MIR SINE MIR 72 149 -113 308 323 31 0 chr20 307711 307807 -66360198 + L2 LINE L2 3136 3234 -38 1958 106 25 21 chr20 308123 308437 -66359568 - AluY SINE Alu 0 315 1 1672 179 17 3 chr20 308464 308754 -66359251 - AluJo SINE Alu -18 294 1 2433 86 10 0 chr20 308821 309122 -66358883 + AluSp SINE Alu 1 304 -9 778 308 43 0 chr20 309248 309482 -66358523 - MIR SINE MIR -17 245 2 222 297 79 23 chr20 309748 309838 -66358167 - MIR SINE MIR -60 148 100 2711 30 3 0 chr20 309838 310142 -66357863 + AluY SINE Alu 1 305 -6 222 297 79 23 chr20 310142 310179 -66357826 - MIR SINE MIR -108 100 67 21 0 0 0 chr20 310252 310273 -66357732 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 310562 310583 -66357422 + GC_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr20 310631 310668 -66357337 + GC_rich Low_complexity Low_complexity 1 37 0 267 31 0 0 chr20 311533 311565 -66356440 + (TG)n Simple_repeat Simple_repeat 1 32 0 521 284 59 31 chr20 312023 312245 -66355760 - MIR SINE MIR -2 260 33 656 272 75 54 chr20 312597 312873 -66355132 - L1MC4a LINE L1 -1924 5884 5597 1517 196 41 0 chr20 312873 313173 -66354832 - AluJo SINE Alu 0 311 1 656 272 75 54 chr20 313173 313244 -66354761 - L1MC4a LINE L1 -2211 5597 5529 220 306 131 52 chr20 313367 313721 -66354284 + L2 LINE L2 2395 2720 -594 1203 245 122 26 chr20 313721 313790 -66354215 - MLT1J LTR MaLR 0 511 450 2445 98 0 0 chr20 313790 314095 -66353910 - AluSc SINE Alu -4 305 1 1203 245 122 26 chr20 314095 314491 -66353514 - MLT1J LTR MaLR -61 450 1 220 306 131 52 chr20 314491 314537 -66353468 + L2 LINE L2 2720 2761 -553 2444 97 0 0 chr20 314537 314846 -66353159 - AluSp SINE Alu -4 309 1 220 306 131 52 chr20 314846 314941 -66353064 + L2 LINE L2 2761 2930 -384 735 181 103 0 chr20 314961 315116 -66352889 + MER5A DNA MER1_type 19 189 0 316 314 48 8 chr20 315141 315265 -66352740 + L2 LINE L2 2985 3113 -159 1876 148 20 33 chr20 315294 315597 -66352408 - AluJb SINE Alu -13 299 1 1281 102 0 0 chr20 315852 316009 -66351996 - AluSg/x SINE Alu -22 288 132 2047 103 4 0 chr20 316009 316272 -66351733 - AluSg SINE Alu -15 295 32 1276 111 0 12 chr20 316312 316484 -66351521 - AluSg SINE Alu -140 170 1 1312 187 21 17 chr20 316527 316762 -66351243 + AluJo SINE Alu 1 236 -76 1066 268 36 50 chr20 316819 316880 -66351125 - L1MC4a LINE L1 -1838 5970 5910 549 163 106 41 chr20 316880 317003 -66351002 + FLAM_A SINE Alu 1 131 -2 1066 268 36 50 chr20 317003 317385 -66350620 - L1MC4a LINE L1 -1898 5910 5533 343 317 42 6 chr20 317996 318163 -66349842 - L2 LINE L2 -264 3008 2836 290 299 0 21 chr20 318277 318374 -66349631 - MIR3 SINE MIR -33 175 81 591 291 27 18 chr20 318536 318756 -66349249 - MIR SINE MIR -19 243 22 407 255 161 0 chr20 319329 319478 -66348527 - L2 LINE L2 0 3313 3141 2513 84 0 3 chr20 319478 319788 -66348217 + AluSq SINE Alu 1 309 -4 482 270 172 47 chr20 320122 320153 -66347852 + MIR SINE MIR 5 31 -231 2386 108 0 0 chr20 320153 320458 -66347547 + AluSx SINE Alu 1 305 -7 482 270 172 47 chr20 320458 320641 -66347364 + MIR SINE MIR 31 246 -16 2428 95 0 0 chr20 321173 321469 -66346536 + AluSx SINE Alu 1 296 -16 748 163 81 12 chr20 321582 321742 -66346263 - MIR SINE MIR -74 188 18 194 256 125 0 chr20 321778 321852 -66346153 + MIR3 SINE MIR 73 156 -52 2216 123 0 3 chr20 321991 322291 -66345714 - AluSx SINE Alu -13 299 1 2600 185 91 40 chr20 322471 322771 -66345234 - L1MC4a LINE L1 0 7808 7525 1949 133 54 0 chr20 322771 323050 -66344955 - AluJo SINE Alu -18 294 1 2600 185 91 40 chr20 323050 323450 -66344555 - L1MC4a LINE L1 -283 7525 7072 2271 101 47 0 chr20 323452 323748 -66344257 - AluSg SINE Alu 0 310 1 2047 152 3 7 chr20 323946 324249 -66343756 + AluJo SINE Alu 11 312 0 484 248 36 15 chr20 324257 324394 -66343611 + MIR3 SINE MIR 6 145 -63 2178 117 3 7 chr20 324596 324894 -66343111 - AluJb SINE Alu -15 297 1 256 246 58 0 chr20 325421 325490 -66342515 + MIR SINE MIR 72 144 -118 399 228 22 11 chr20 326304 326396 -66341609 - L2 LINE L2 -24 3289 3197 316 216 15 121 chr20 327213 327354 -66340651 - MLT1L LTR MaLR -48 567 336 993 201 56 26 chr20 327442 327676 -66340329 + MIR SINE MIR 12 252 -10 2348 66 3 30 chr20 327682 327984 -66340021 + AluSg SINE Alu 1 294 -16 366 236 22 0 chr20 328017 328106 -66339899 - MLT1L LTR MaLR -344 271 181 397 187 19 192 chr20 328258 328404 -66339601 + MLT1H LTR MaLR 373 472 -77 2379 81 0 28 chr20 328404 328724 -66339281 - AluSx SINE Alu -1 311 1 397 187 19 192 chr20 328724 328791 -66339214 + MLT1H LTR MaLR 472 549 0 333 333 56 0 chr20 329032 329140 -66338865 - MIR SINE MIR -69 193 80 2373 91 0 0 chr20 329240 329537 -66338468 + AluSx SINE Alu 1 297 -15 303 266 245 29 chr20 329768 329907 -66338098 - L2 LINE L2 0 3272 3104 292 197 167 0 chr20 329973 330039 -66337966 + MLT1J2 LTR MaLR 67 143 -307 339 235 136 15 chr20 330114 330246 -66337759 + MLT1J2 LTR MaLR 299 446 -4 447 272 304 10 chr20 330334 330647 -66337358 - MLT1H LTR MaLR -72 477 73 3164 159 23 14 chr20 330674 330840 -66337165 - MER44D DNA MER2_type -1882 705 542 2596 75 0 0 chr20 330840 331148 -66336857 + AluSc SINE Alu 1 308 -1 3164 159 23 14 chr20 331148 331597 -66336408 - MER44D DNA MER2_type -2045 542 8 805 93 0 0 chr20 331835 331942 -66336063 + AluSp/q SINE Alu 207 313 0 1602 143 42 23 chr20 331948 332213 -66335792 - AluJo SINE Alu -31 281 12 439 289 102 0 chr20 332231 332397 -66335608 + MER5A DNA MER1_type 7 189 0 606 230 184 0 chr20 332613 332809 -66335196 + L2 LINE L2 3082 3313 0 214 328 0 0 chr20 332868 332929 -66335076 - MIR SINE MIR -19 243 183 2437 206 23 15 chr20 332938 333461 -66334544 + MLT1F LTR MaLR 16 542 0 503 268 33 13 chr20 333462 333615 -66334390 - MIR SINE MIR -78 184 29 609 290 65 81 chr20 333776 333876 -66334129 + L1MEd LINE L1 800 900 -5305 2193 101 0 10 chr20 333876 334174 -66333831 + AluSq SINE Alu 1 295 -18 609 290 65 81 chr20 334174 334307 -66333698 + L1MEd LINE L1 900 1034 -5171 2277 89 0 7 chr20 334307 334589 -66333416 + AluSq SINE Alu 1 280 -33 288 0 0 0 chr20 334589 334621 -66333384 + (CA)n Simple_repeat Simple_repeat 1 32 0 609 290 65 81 chr20 334621 334695 -66333310 + L1MEd LINE L1 1032 1104 -5101 349 223 210 64 chr20 334692 334849 -66333156 + L1MEd LINE L1 1333 1512 -4884 * 292 147 35 198 chr20 334872 334988 -66333017 + L1MB7 LINE L1 5814 5910 -264 469 92 0 0 chr20 334998 335063 -66332942 - AluJb SINE Alu -20 292 228 1199 119 0 0 chr20 335063 335222 -66332783 - AluJb SINE Alu -149 163 5 1050 178 40 36 chr20 335227 335365 -66332640 + L1MB7 LINE L1 5909 6045 -139 2163 148 0 0 chr20 335365 335676 -66332329 - AluSx SINE Alu -1 311 1 1050 178 40 36 chr20 335676 335812 -66332193 + L1MB7 LINE L1 6045 6184 0 1629 127 107 8 chr20 335913 336166 -66331839 + AluJo SINE Alu 29 306 -6 235 186 0 0 chr20 336170 336213 -66331792 + MER5B DNA MER1_type 136 178 0 983 285 127 25 chr20 336271 337012 -66330993 - L2 LINE L2 0 3313 2476 188 276 35 0 chr20 337150 337208 -66330797 + MIR SINE MIR 81 140 -68 405 50 30 69 chr20 337367 337468 -66330537 + (CCCCG)n Simple_repeat Simple_repeat 2 98 0 749 278 200 10 chr20 338535 339042 -66328963 + L2 LINE L2 2698 3313 0 249 326 0 11 chr20 339109 339198 -66328807 - L2 LINE L2 -213 3059 2972 463 303 58 0 chr20 339514 339669 -66328336 + MIR SINE MIR 19 182 -80 569 293 156 50 chr20 339721 340080 -66327925 - MLT1J LTR MaLR -88 423 27 181 262 131 0 chr20 340096 340157 -66327848 + MIR SINE MIR 179 247 -15 4422 162 44 39 chr20 340268 340631 -66327374 - L1MB7 LINE L1 0 6184 5824 1569 191 23 43 chr20 340631 340785 -66327220 - AluJo SINE Alu -19 293 146 2462 64 0 3 chr20 340785 341081 -66326924 - AluY SINE Alu -16 295 1 1569 191 23 43 chr20 341081 341225 -66326780 - AluJo SINE Alu -166 146 1 4422 162 44 39 chr20 341225 341734 -66326271 - L1MB7 LINE L1 -360 5824 5319 2266 100 10 3 chr20 341734 342033 -66325972 - AluSx SINE Alu -11 301 1 4422 162 44 39 chr20 342033 342835 -66325170 - L1MB7 LINE L1 -865 5319 4515 347 200 111 22 chr20 342838 342928 -66325077 - HAL1b LINE L1 -442 906 809 201 250 0 0 chr20 343073 343113 -66324892 + MER5A DNA MER1_type 70 109 -80 1353 209 62 4 chr20 343574 343832 -66324173 + AluJb SINE Alu 30 302 -10 342 214 125 0 chr20 344315 344427 -66323578 - HAL1 LINE L1 -838 1669 1544 647 245 122 39 chr20 344427 344508 -66323497 - L1MC5 LINE L1 -176 7785 7712 1791 174 27 3 chr20 344508 344806 -66323199 + AluJo SINE Alu 1 305 -7 647 245 122 39 chr20 344806 345090 -66322915 - L1MC5 LINE L1 -249 7712 7376 1905 176 65 17 chr20 345090 345493 -66322512 - MSTB LTR MaLR 0 426 5 647 245 122 39 chr20 345493 345562 -66322443 - L1MC5 LINE L1 -585 7376 7314 2258 68 0 18 chr20 345569 345848 -66322157 - AluY SINE Alu -11 300 27 372 329 59 59 chr20 345856 346075 -66321930 - HAL1 LINE L1 -1428 1079 861 1638 170 40 7 chr20 346132 346409 -66321596 + AluJb SINE Alu 1 286 -26 663 244 51 15 chr20 346429 346626 -66321379 + MIR SINE MIR 56 259 -3 206 307 123 9 chr20 346634 346748 -66321257 - L2 LINE L2 -448 2866 2740 252 0 0 0 chr20 346810 346838 -66321167 + (TG)n Simple_repeat Simple_repeat 1 28 0 230 246 0 29 chr20 347071 347140 -66320865 + CT-rich Low_complexity Low_complexity 1 67 0 288 189 62 37 chr20 347542 347654 -66320351 + MIR SINE MIR 43 156 -78 1516 183 210 44 chr20 347679 347786 -66320219 - L1MC4 LINE L1 0 8042 7954 2686 37 0 0 chr20 347786 348082 -66319923 - AluY SINE Alu -15 296 1 1516 183 210 44 chr20 348082 348516 -66319489 - L1MC4 LINE L1 -88 7954 7411 267 55 0 82 chr20 350085 350158 -66317847 + (CCCCCA)n Simple_repeat Simple_repeat 6 72 0 303 326 42 0 chr20 350536 350680 -66317325 - MIR SINE MIR -67 195 46 248 219 286 28 chr20 351052 351339 -66316666 - L2 LINE L2 -376 2938 2578 616 162 0 0 chr20 351729 351834 -66316171 - FLAM_C SINE Alu -1 142 38 289 313 114 20 chr20 351930 351962 -66316043 + MIR SINE MIR 3 31 -231 1697 139 56 63 chr20 351962 352264 -66315741 + AluJb SINE Alu 1 300 -12 289 313 114 20 chr20 352264 352432 -66315573 + MIR SINE MIR 31 222 -40 2339 81 3 0 chr20 352434 352718 -66315287 + AluSp SINE Alu 3 287 -26 321 221 139 0 chr20 352764 352850 -66315155 - MLT1H LTR MaLR 0 595 498 1219 142 25 0 chr20 352952 353156 -66314849 - MER2 DNA MER2_type -135 210 2 494 249 93 57 chr20 353158 353492 -66314513 - MLT1H LTR MaLR -96 453 108 301 244 56 0 chr20 353625 353715 -66314290 + MIR3 SINE MIR 66 160 -48 2384 102 0 0 chr20 354422 354725 -66313280 - AluSx SINE Alu -9 303 1 327 263 38 2 chr20 354747 354859 -66313146 - L1ME2 LINE L1 -5 6161 6045 2277 123 0 0 chr20 355038 355339 -66312666 - AluSg SINE Alu -9 301 1 335 315 50 39 chr20 355353 355488 -66312517 - L1ME LINE L1 -458 5663 5524 3175 116 41 0 chr20 355488 356005 -66312000 - L1MA2 LINE L1 0 6304 5767 335 315 50 39 chr20 356005 356050 -66311955 - L1ME LINE L1 -597 5524 5481 845 78 39 0 chr20 356056 356184 -66311821 - L1MB3 LINE L1 0 6183 6051 1697 174 3 43 chr20 356231 356553 -66311452 - AluJo SINE Alu -3 309 1 210 342 26 13 chr20 357068 357220 -66310785 + (CCCCAG)n Simple_repeat Simple_repeat 5 158 0 329 203 0 0 chr20 357629 357688 -66310317 + AluSp SINE Alu 131 189 -114 227 113 170 19 chr20 357706 357759 -66310246 + MIR SINE MIR 83 143 -65 1269 201 108 25 chr20 358567 358641 -66309364 + MER58B DNA MER1_type 2 68 -2352 2456 78 3 0 chr20 358641 358935 -66309070 - AluSp SINE Alu -13 300 6 1269 201 108 25 chr20 358935 359174 -66308831 + MER58B DNA MER1_type 68 341 0 533 290 80 18 chr20 359177 359401 -66308604 + MIR SINE MIR 5 242 -20 432 250 74 69 chr20 361450 361666 -66306339 + Charlie8 DNA MER1_type 49 265 -2152 349 244 76 130 chr20 363067 363382 -66304623 - MER21B LTR ERV1 -158 705 408 2534 63 7 0 chr20 363416 363716 -66304289 - AluSq SINE Alu -11 302 1 395 222 62 151 chr20 363777 364002 -66304003 - MER21B LTR ERV1 -658 205 1 2401 176 147 98 chr20 364605 365476 -66302529 - MER21A LTR ERV1 -17 914 1 185 282 90 0 chr20 365513 365591 -66302414 - MIR SINE MIR -122 140 56 2371 106 0 3 chr20 366245 366556 -66301449 + AluSx SINE Alu 1 310 -2 431 161 43 11 chr20 369394 369487 -66298518 - MER103 DNA DNA -57 109 14 2211 103 10 3 chr20 370224 370516 -66297489 + AluSp SINE Alu 2 295 -18 21 0 0 0 chr20 370531 370552 -66297453 + AT_rich Low_complexity Low_complexity 1 21 0 1422 236 103 84 chr20 371634 372230 -66295775 + L1MC4 LINE L1 7323 7937 -105 2332 83 0 10 chr20 372230 372532 -66295473 + AluY SINE Alu 1 299 -12 1422 236 103 84 chr20 372532 372641 -66295364 + L1MC4 LINE L1 7937 8042 0 2180 98 7 24 chr20 373266 373561 -66294444 + AluSq SINE Alu 11 300 -13 182 156 22 0 chr20 373965 374010 -66293995 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 2213 114 14 0 chr20 375763 376053 -66291952 - AluSx SINE Alu -16 296 3 1355 186 133 0 chr20 376083 376346 -66291659 - AluJo SINE Alu -14 298 1 2246 104 0 41 chr20 376358 376674 -66291331 - AluSg1 SINE Alu -6 303 1 2346 115 0 6 chr20 376792 377104 -66290901 + AluSx SINE Alu 3 312 0 2406 94 0 0 chr20 377823 378121 -66289884 + AluSg SINE Alu 1 298 -12 674 193 0 0 chr20 378121 378235 -66289770 - FLAM_A SINE Alu -18 115 2 2169 92 13 23 chr20 378256 378559 -66289446 - AluSg SINE Alu -10 300 1 1055 63 0 0 chr20 378568 378694 -66289311 - AluSc SINE Alu -12 297 172 180 0 0 0 chr20 378700 378720 -66289285 + (A)n Simple_repeat Simple_repeat 1 20 0 2391 101 0 3 chr20 378729 379037 -66288968 + AluSg SINE Alu 1 307 -3 342 291 0 12 chr20 379045 379131 -66288874 + MIR SINE MIR 38 122 -86 2200 106 17 0 chr20 379568 379860 -66288145 - AluSx SINE Alu -15 297 1 626 82 41 20 chr20 380077 380175 -66287830 + HY3 scRNA scRNA 1 100 -1 2215 99 0 10 chr20 380677 380989 -66287016 + AluSx SINE Alu 1 309 0 437 189 0 14 chr20 381149 381223 -66286782 - AluJb SINE Alu -28 284 212 2187 112 0 7 chr20 381441 381745 -66286260 + AluSg SINE Alu 1 302 -8 1595 176 49 4 chr20 381761 382028 -66285977 + AluJo SINE Alu 1 279 -33 2326 89 13 22 chr20 382282 382598 -66285407 + AluSp SINE Alu 1 313 0 2371 81 0 26 chr20 382605 382913 -66285092 + AluSp SINE Alu 1 300 -13 895 88 7 73 chr20 382929 382955 -66285050 + AluSq/x SINE Alu 10 36 -276 2402 97 0 19 chr20 382955 383264 -66284741 - AluSg SINE Alu -7 303 1 895 88 7 73 chr20 383264 383373 -66284632 + AluSq/x SINE Alu 36 136 -176 2280 92 20 10 chr20 383373 383678 -66284327 + AluY SINE Alu 1 308 -3 1908 133 14 14 chr20 384065 384386 -66283619 - AluSx SINE Alu 0 321 1 551 213 0 71 chr20 384590 384731 -66283274 - MER94 DNA DNA 0 134 4 2183 122 0 0 chr20 384767 385062 -66282943 + AluSx SINE Alu 18 312 0 2479 90 3 0 chr20 385065 385375 -66282630 + AluSq SINE Alu 1 311 -2 1245 182 146 16 chr20 385421 385674 -66282331 + AluSx SINE Alu 12 297 -15 198 103 0 0 chr20 385752 385781 -66282224 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 325 310 138 85 chr20 385796 385972 -66282033 - L2 LINE L2 -1 3271 3106 2338 101 0 7 chr20 385972 386280 -66281725 - AluSq SINE Alu -7 306 1 325 310 138 85 chr20 386280 386339 -66281666 - L2 LINE L2 -166 3106 3052 2509 88 3 0 chr20 386339 386647 -66281358 - AluSp SINE Alu -4 309 1 1588 165 91 11 chr20 386648 386933 -66281072 - AluJo SINE Alu -4 308 1 325 310 138 85 chr20 386933 387094 -66280911 - L2 LINE L2 -219 3053 2851 1907 137 23 23 chr20 387726 388025 -66279980 - AluJb SINE Alu -13 299 1 225 0 0 0 chr20 389051 389076 -66278929 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 416 209 9 45 chr20 389076 389179 -66278826 - MER31A LTR ERV1 -32 453 353 920 162 0 7 chr20 389716 389864 -66278141 + FRAM SINE Alu 20 166 -10 24 0 0 0 chr20 390468 390492 -66277513 + AT_rich Low_complexity Low_complexity 1 24 0 1714 166 17 7 chr20 390772 391073 -66276932 - AluJo SINE Alu -8 304 1 697 206 144 0 chr20 391116 391296 -66276709 + L1MB7 LINE L1 5955 6160 -24 206 271 7 46 chr20 391620 391771 -66276234 + C-rich Low_complexity Low_complexity 3 147 0 21 0 0 0 chr20 391817 391838 -66276167 + GC_rich Low_complexity Low_complexity 1 21 0 27 62 0 0 chr20 391936 391984 -66276021 + GC_rich Low_complexity Low_complexity 1 48 0 255 252 164 101 chr20 392092 392251 -66275754 + MIR SINE MIR 83 251 -11 348 239 65 0 chr20 392355 392447 -66275558 - MER91C DNA MER1_type -6 134 37 187 309 104 70 chr20 392476 392706 -66275299 + L2 LINE L2 718 955 -2359 627 53 0 0 chr20 392708 392784 -66275221 - Alu SINE Alu -232 77 2 1588 155 87 18 chr20 393109 393386 -66274619 - AluJo SINE Alu -11 301 6 2204 121 0 0 chr20 393514 393811 -66274194 + AluSx SINE Alu 14 310 -2 338 257 83 0 chr20 394047 394156 -66273849 - L1MCc LINE L1 -4365 2757 2640 * 814 218 33 37 chr20 394153 394426 -66273579 - L1ME1 LINE L1 -165 6001 5764 1293 198 72 0 chr20 394520 394798 -66273207 + MER58B DNA MER1_type 21 318 -23 2295 66 17 10 chr20 394835 395123 -66272882 - AluSp SINE Alu -23 290 1 2307 108 10 0 chr20 395149 395454 -66272551 + AluSx SINE Alu 1 308 -4 581 163 24 41 chr20 395470 395593 -66272412 - FLAM_C SINE Alu -22 121 1 1323 253 152 24 chr20 395619 396035 -66271970 - L1MCc LINE L1 -4490 2451 2090 372 94 0 0 chr20 396035 396088 -66271917 + (TA)n Simple_repeat Simple_repeat 1 53 0 1323 253 152 24 chr20 396088 396432 -66271573 - L1MCc LINE L1 -4851 2090 1791 2504 60 13 0 chr20 396432 396731 -66271274 - AluY SINE Alu -8 303 1 1323 253 152 24 chr20 396731 397085 -66270920 - L1MCc LINE L1 -5150 1791 1188 1148 169 6 6 chr20 397090 397273 -66270732 + AluJo SINE Alu 1 183 -129 2248 177 100 15 chr20 397273 397742 -66270263 - LTR22 LTR ERVK 0 509 1 21538 84 21 2 chr20 397742 400858 -66267147 - HERVK22 LTR ERVK 0 6837 2332 1346 119 25 0 chr20 400856 401058 -66266947 - HERVK22 LTR ERVK -5932 905 699 * 4951 99 42 33 chr20 401052 401846 -66266159 - HERVK22 LTR ERVK -6036 801 1 2210 184 98 11 chr20 401846 402314 -66265691 - LTR22 LTR ERVK 0 509 1 926 121 0 0 chr20 402315 402439 -66265566 + AluJo SINE Alu 179 302 -10 738 249 99 55 chr20 402439 402801 -66265204 - L1MCc LINE L1 -5230 1193 816 365 266 46 87 chr20 403427 403466 -66264539 - L2 LINE L2 -562 2752 2713 1223 194 90 21 chr20 403466 403745 -66264260 - AluJo SINE Alu -2 300 3 365 266 46 87 chr20 403745 403946 -66264059 - L2 LINE L2 -601 2713 2522 677 235 78 53 chr20 404023 404342 -66263663 - HAL1 LINE L1 -168 2339 2013 2195 123 0 7 chr20 404588 404889 -66263116 + AluSx SINE Alu 1 299 -13 225 268 45 45 chr20 405032 405144 -66262861 + MLT1H LTR MaLR 50 161 -388 2081 138 3 3 chr20 405671 405969 -66262036 - AluSx SINE Alu -13 299 2 1931 172 7 0 chr20 405979 406282 -66261723 - AluJb SINE Alu -7 305 1 2023 128 7 0 chr20 406312 406600 -66261405 - AluJo SINE Alu -22 290 1 1139 183 26 30 chr20 406620 406850 -66261155 - AluJb SINE Alu -26 286 58 1342 55 31 0 chr20 407121 407284 -66260721 + AluSp SINE Alu 1 168 -145 253 0 54 0 chr20 407295 407332 -66260673 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 234 206 73 39 chr20 407506 407582 -66260423 + L2 LINE L2 3175 3263 -9 1735 156 30 20 chr20 408058 408359 -66259646 + AluJb SINE Alu 1 304 -8 344 217 96 70 chr20 408541 408656 -66259349 - MER91B DNA MER1_type -61 129 12 197 219 276 9 chr20 408668 408773 -66259232 - MIR SINE MIR -6 256 124 1060 192 103 5 chr20 409193 409407 -66258598 + MER46A DNA MER2_type 1 235 -1 306 67 0 0 chr20 409646 409691 -66258314 + (TG)n Simple_repeat Simple_repeat 2 46 0 27 29 0 0 chr20 410522 410556 -66257449 + AT_rich Low_complexity Low_complexity 1 34 0 270 116 0 0 chr20 412876 412919 -66255086 + (TTCC)n Simple_repeat Simple_repeat 1 43 0 308 246 76 94 chr20 413612 413783 -66254222 - MIR SINE MIR -56 206 39 797 144 106 0 chr20 413807 413939 -66254066 + MER3 DNA MER1_type 63 208 -1 279 0 0 0 chr20 414106 414137 -66253868 + (TG)n Simple_repeat Simple_repeat 2 32 0 2336 103 3 0 chr20 414196 414507 -66253498 + AluSx SINE Alu 1 312 0 252 0 0 0 chr20 414521 414549 -66253456 + (TA)n Simple_repeat Simple_repeat 2 29 0 2067 107 14 3 chr20 414605 414894 -66253111 - AluSx SINE Alu -20 292 1 583 258 125 33 chr20 414894 415134 -66252871 - L1MC4a LINE L1 -1915 5893 5632 234 249 186 27 chr20 416665 416788 -66251217 - MIR SINE MIR -77 131 45 1210 174 144 8 chr20 417452 417716 -66250289 - AluJo SINE Alu -12 300 1 317 337 53 80 chr20 418392 418656 -66249349 + L2 LINE L2 2981 3237 -35 36 0 0 0 chr20 419348 419384 -66248621 + AT_rich Low_complexity Low_complexity 1 36 0 2196 110 10 7 chr20 419429 419738 -66248267 - AluSg SINE Alu 0 310 1 258 125 0 0 chr20 419740 419788 -66248217 + (T)n Simple_repeat Simple_repeat 1 48 0 2066 117 20 7 chr20 419816 420115 -66247890 - AluSg1 SINE Alu -6 303 1 925 132 112 20 chr20 420116 420268 -66247737 - FRAM SINE Alu -14 162 1 319 297 108 51 chr20 420366 420561 -66247444 - L1ME LINE L1 -317 5804 5599 1880 155 3 17 chr20 420800 421097 -66246908 + AluJo SINE Alu 5 297 -15 1933 75 8 11 chr20 421097 421362 -66246643 + AluY SINE Alu 44 308 -3 223 319 77 47 chr20 421798 421967 -66246038 + L2 LINE L2 2648 2821 -493 360 310 47 31 chr20 422185 422314 -66245691 + L2 LINE L2 3182 3312 -1 949 248 89 23 chr20 422492 422795 -66245210 + L2 LINE L2 2348 2670 -644 46 45 0 0 chr20 422800 422867 -66245138 + AT_rich Low_complexity Low_complexity 1 67 0 3181 182 128 57 chr20 422905 423436 -66244569 - L1MD2 LINE L1 -32 6327 5716 2320 81 17 7 chr20 423436 423734 -66244271 - AluSg SINE Alu -9 301 1 3181 182 128 57 chr20 423734 424025 -66243980 - L1MD2 LINE L1 -643 5716 5447 825 300 149 16 chr20 424028 424567 -66243438 + L2 LINE L2 2697 3313 0 221 269 43 85 chr20 424750 424891 -66243114 - MIR SINE MIR -72 190 56 239 316 13 0 chr20 424997 425073 -66242932 - L2 LINE L2 -3 3269 3193 1261 193 52 0 chr20 425613 425826 -66242179 + MER58A DNA MER1_type 1 224 0 1445 163 58 34 chr20 426563 426858 -66241147 - AluJo SINE Alu -8 304 3 784 116 0 27 chr20 426873 426985 -66241020 - FLAM_C SINE Alu -18 125 17 1225 112 0 6 chr20 427747 427916 -66240089 - FRAM SINE Alu -8 168 1 24 0 0 0 chr20 429370 429394 -66238611 + AT_rich Low_complexity Low_complexity 1 24 0 237 306 65 28 chr20 429443 429551 -66238454 + L2 LINE L2 3156 3267 -5 527 295 84 0 chr20 429811 429977 -66238028 + MIR SINE MIR 16 195 -67 2286 52 4 0 chr20 430046 430315 -66237690 - AluY SINE Alu -8 303 34 2355 93 0 0 chr20 430481 430772 -66237233 - AluSg SINE Alu -17 293 3 1175 159 142 21 chr20 430809 431098 -66236907 - MER33 DNA MER1_type 0 324 1 250 338 102 13 chr20 431191 431348 -66236657 - MER5A DNA MER1_type -2 187 17 868 204 0 6 chr20 432561 432723 -66235282 - FRAM SINE Alu -18 158 1 2208 211 39 66 chr20 432874 433307 -66234698 + MER119 DNA MER1_type 34 450 -133 2505 71 0 3 chr20 433307 433618 -66234387 + AluSx SINE Alu 1 310 -2 2208 211 39 66 chr20 433618 433748 -66234257 + MER119 DNA MER1_type 450 582 -1 856 267 44 4 chr20 433876 434101 -66233904 + Charlie8 DNA MER1_type 45 278 -2139 327 275 55 9 chr20 434266 434375 -66233630 + MIR SINE MIR 32 145 -63 2476 61 0 10 chr20 434763 435073 -66232932 - AluY SINE Alu -4 307 1 22 0 0 0 chr20 435078 435100 -66232905 + AT_rich Low_complexity Low_complexity 1 22 0 2628 36 0 7 chr20 435281 435587 -66232418 - AluY SINE Alu -7 304 1 957 144 0 0 chr20 436521 436667 -66231338 + AluSg/x SINE Alu 129 274 -36 1021 130 204 133 chr20 437283 437606 -66230399 - MER7A DNA MER2_type -2 344 1 1835 174 0 3 chr20 439001 439288 -66228717 - AluJb SINE Alu -26 286 1 368 222 139 141 chr20 439288 439582 -66228423 + L1MC4 LINE L1 7478 7771 -271 2444 69 3 10 chr20 439582 439886 -66228119 - AluSp SINE Alu -11 302 1 368 222 139 141 chr20 439886 440112 -66227893 + L1MC4 LINE L1 7771 7999 -43 1734 165 9 37 chr20 440112 440433 -66227572 - AluJb SINE Alu 0 312 1 3719 154 29 50 chr20 440444 440485 -66227520 - L1MB3 LINE L1 0 6183 6143 1651 157 61 7 chr20 440485 440765 -66227240 + AluJb SINE Alu 1 295 -17 3719 154 29 50 chr20 440765 441115 -66226890 - L1MB3 LINE L1 -40 6143 5811 252 0 0 0 chr20 441115 441143 -66226862 + (CA)n Simple_repeat Simple_repeat 2 29 0 3719 154 29 50 chr20 441143 441472 -66226533 - L1MB3 LINE L1 -372 5811 5477 628 88 22 11 chr20 441477 441568 -66226437 - FLAM_C SINE Alu -19 124 33 1070 157 12 23 chr20 441589 441829 -66226176 - L1P3 LINE L1 -632 5522 5280 1632 173 48 0 chr20 443486 443787 -66224218 + AluJb SINE Alu 1 314 0 1790 151 0 31 chr20 443862 444153 -66223852 - AluJb SINE Alu -30 282 1 198 311 49 0 chr20 444317 444378 -66223627 - L2 LINE L2 -25 3288 3225 486 269 253 23 chr20 444393 444828 -66223177 - L2 LINE L2 -516 2798 2264 347 304 119 6 chr20 444821 444989 -66223016 - MIR SINE MIR -48 214 28 * 227 369 39 39 chr20 445068 445198 -66222807 + L2 LINE L2 3143 3272 0 262 208 0 0 chr20 446750 446798 -66221207 - L2 LINE L2 -6 3266 3219 224 91 0 0 chr20 446962 446995 -66221010 - L2 LINE L2 -2 3311 3279 840 186 0 0 chr20 447412 447541 -66220464 - FRAM SINE Alu -47 129 1 233 290 110 10 chr20 447843 447943 -66220062 + L1ME1 LINE L1 647 756 -5449 2418 75 0 28 chr20 447947 448266 -66219739 - AluY SINE Alu -1 310 1 2167 128 0 7 chr20 448345 448649 -66219356 - AluSx SINE Alu -10 302 1 521 284 118 34 chr20 448681 448844 -66219161 + L1ME1 LINE L1 1268 1416 -4980 773 214 0 0 chr20 448844 448975 -66219030 + FLAM_A SINE Alu 1 131 -2 521 284 118 34 chr20 448975 449160 -66218845 + L1ME1 LINE L1 1416 1645 -4751 328 330 69 35 chr20 449286 449547 -66218458 + L1ME1 LINE L1 1918 2187 -4209 255 220 11 55 chr20 449574 449665 -66218340 + L1ME1 LINE L1 2201 2287 -3930 * 2136 195 73 91 chr20 449656 449921 -66218084 + L1ME1 LINE L1 4725 4993 -1242 1843 157 0 0 chr20 449921 450195 -66217810 - AluSx SINE Alu -22 290 17 2136 195 73 91 chr20 450195 451166 -66216839 + L1ME1 LINE L1 4993 5923 -312 816 204 0 0 chr20 451167 451299 -66216706 - FLAM_C SINE Alu -10 133 2 374 86 200 0 chr20 451299 451369 -66216636 + L1ME1 LINE L1 5840 5923 -243 1231 130 31 16 chr20 451369 451561 -66216444 + MER1B DNA MER1_type 1 195 -102 2698 157 87 29 chr20 451679 452103 -66215902 + L1MD3 LINE L1 7401 7866 -129 1378 165 105 35 chr20 452103 452388 -66215617 - AluJo SINE Alu -7 305 1 2698 157 87 29 chr20 452388 452516 -66215489 + L1MD3 LINE L1 7866 7985 -10 2087 191 19 24 chr20 452559 453021 -66214984 + L1ME1 LINE L1 5494 5953 -213 1581 65 0 0 chr20 453021 453206 -66214799 + AluY SINE Alu 1 185 -126 704 58 0 0 chr20 453206 453293 -66214712 + AluY SINE Alu 218 304 -7 573 272 97 19 chr20 453293 453499 -66214506 + L1ME1 LINE L1 5945 6166 0 1929 130 20 13 chr20 453553 453852 -66214153 + AluSx SINE Alu 1 301 -11 1416 105 85 74 chr20 453884 454142 -66213863 + AluSx SINE Alu 44 304 -8 458 125 38 12 chr20 454169 454249 -66213756 + L1MA6 LINE L1 6215 6296 -4 1293 207 79 8 chr20 454254 454520 -66213485 + AluJo SINE Alu 2 286 -16 23 0 0 0 chr20 454530 454553 -66213452 + AT_rich Low_complexity Low_complexity 1 23 0 291 136 102 0 chr20 454576 454635 -66213370 + L1M4 LINE L1 2945 3009 -3137 911 144 23 0 chr20 454641 454773 -66213232 + AluJo SINE Alu 1 135 -177 2622 52 3 0 chr20 454782 455090 -66212915 + AluY SINE Alu 1 309 -2 1520 151 3 102 chr20 455102 455427 -66212578 + AluJo SINE Alu 1 293 -19 793 168 15 29 chr20 455603 455740 -66212265 + AluJo SINE Alu 2 136 -176 1527 131 75 75 chr20 455740 456022 -66211983 + AluJo SINE Alu 1 282 -30 1996 103 28 14 chr20 456085 456367 -66211638 + AluSg SINE Alu 1 286 -24 618 79 0 0 chr20 456367 456456 -66211549 + (GA)n Simple_repeat Simple_repeat 2 90 0 357 254 44 33 chr20 456521 456702 -66211303 + L1M4 LINE L1 3275 3457 -2689 766 149 0 0 chr20 457142 457249 -66210756 - AluSq/x SINE Alu -205 108 2 1213 164 66 145 chr20 457855 458173 -66209832 - AluJo SINE Alu -9 293 1 4263 154 23 16 chr20 458368 458446 -66209559 + MER44D DNA MER2_type 33 109 -2378 1481 167 68 14 chr20 458446 458737 -66209268 - AluJo SINE Alu -20 292 1 4263 154 23 16 chr20 458737 459353 -66208652 + MER44D DNA MER2_type 109 604 -1 2153 174 61 30 chr20 459396 459868 -66208137 - L1MB7 LINE L1 -19 6165 5679 1913 147 3 19 chr20 459871 460185 -66207820 - AluJo SINE Alu -3 309 1 1970 128 7 3 chr20 460214 460512 -66207493 + AluSq SINE Alu 1 299 -14 2005 78 7 55 chr20 461581 461888 -66206117 - AluSc SINE Alu -17 292 1 1072 130 0 0 chr20 462868 463022 -66204983 + AluSg/x SINE Alu 137 290 -22 197 296 99 12 chr20 463540 463621 -66204384 - MIR SINE MIR -114 148 61 1978 116 6 25 chr20 464158 464476 -66203529 + AluSx SINE Alu 1 312 0 819 151 0 0 chr20 464491 464610 -66203395 + FLAM_C SINE Alu 7 125 -18 2021 95 56 0 chr20 464885 465170 -66202835 + AluSx SINE Alu 1 301 -11 438 128 163 0 chr20 465840 465926 -66202079 - MIR SINE MIR -75 187 88 213 297 27 14 chr20 465922 465996 -66202009 - MIR SINE MIR -102 160 86 * 198 182 73 73 chr20 466241 466296 -66201709 + L2 LINE L2 3216 3270 -2 1827 106 67 14 chr20 467375 467658 -66200347 - AluSx SINE Alu -14 298 1 2336 188 155 11 chr20 468543 469090 -66198915 - MLT1E2 LTR MaLR 0 626 1 918 275 85 87 chr20 469090 469701 -66198304 - MLT1E2-int LTR MaLR 0 1371 762 1087 220 13 4 chr20 469717 469949 -66198056 - MLT1E2-int LTR MaLR -889 482 249 727 106 19 0 chr20 469955 470059 -66197946 - AluJb SINE Alu -19 293 188 370 172 253 0 chr20 470062 470161 -66197844 - MLT1E2-int LTR MaLR -1247 124 1 2959 183 37 41 chr20 470161 470790 -66197215 - MLT1E2 LTR MaLR 0 626 1 689 244 146 28 chr20 471579 471792 -66196213 - MIR SINE MIR -23 239 2 2281 58 7 0 chr20 471846 472141 -66195864 - AluSg SINE Alu -13 297 1 270 329 67 48 chr20 473826 474142 -66193863 + L2 LINE L2 2636 2957 -357 300 258 16 0 chr20 474757 474819 -66193186 + MIR3 SINE MIR 114 176 -32 525 308 263 23 chr20 474912 475352 -66192653 - L2 LINE L2 -3 3310 2752 487 316 35 0 chr20 475717 475888 -66192117 - MIR SINE MIR -40 222 46 180 0 0 0 chr20 475899 475919 -66192086 + (TC)n Simple_repeat Simple_repeat 2 21 0 1610 165 4 11 chr20 475919 476086 -66191919 - AluJo SINE Alu -27 285 119 204 40 0 0 chr20 476086 476111 -66191894 + (TTA)n Simple_repeat Simple_repeat 2 26 0 1610 165 4 11 chr20 476111 476210 -66191795 - AluJo SINE Alu -193 119 21 1346 277 62 57 chr20 476241 476787 -66191218 - MLT1E2 LTR MaLR 0 549 1 268 264 14 0 chr20 476804 476876 -66191129 + L1ME LINE L1 5759 5831 -290 869 183 29 11 chr20 476876 477051 -66190954 - MIR SINE MIR -22 240 63 2108 100 14 0 chr20 477195 477486 -66190519 - AluSq SINE Alu -18 295 1 2296 74 3 0 chr20 477548 477844 -66190161 + AluY SINE Alu 1 297 -14 1698 162 0 10 chr20 477989 478279 -66189726 - AluJb SINE Alu -5 307 21 200 213 0 0 chr20 478391 478438 -66189567 + T-rich Low_complexity Low_complexity 1 47 0 391 246 10 13 chr20 478666 478771 -66189234 + MIR SINE MIR 48 147 -61 2103 126 3 3 chr20 478775 479150 -66188855 + AluSx SINE Alu 1 375 0 410 245 27 54 chr20 479195 479342 -66188663 + MLT1H LTR MaLR 68 210 -339 22 0 0 0 chr20 479498 479520 -66188485 + AT_rich Low_complexity Low_complexity 1 22 0 296 288 32 48 chr20 479806 479931 -66188074 + MIR SINE MIR 140 262 0 711 300 146 6 chr20 479933 480276 -66187729 - L2 LINE L2 -62 3251 2861 3036 231 82 58 chr20 480384 480992 -66187013 - L2 LINE L2 -468 2846 2255 1645 178 48 66 chr20 480992 481385 -66186620 + MLT1B LTR MaLR 4 389 -1 3036 231 82 58 chr20 481385 481424 -66186581 - L2 LINE L2 -1059 2255 2218 2131 105 7 0 chr20 481424 481718 -66186287 + AluSq SINE Alu 1 296 -17 3036 231 82 58 chr20 481718 482075 -66185930 - L2 LINE L2 -1096 2218 1816 267 103 0 0 chr20 482090 482129 -66185876 + (GGAA)n Simple_repeat Simple_repeat 4 42 0 2301 93 0 0 chr20 482132 482433 -66185572 - AluSx SINE Alu -11 301 1 2673 208 122 41 chr20 482434 482463 -66185542 + L1MC4 LINE L1 7100 7125 -917 2193 105 0 3 chr20 482463 482767 -66185238 + AluSq SINE Alu 1 303 -10 2673 208 122 41 chr20 482767 483128 -66184877 + L1MC4 LINE L1 7125 7456 -586 2242 96 0 0 chr20 483128 483420 -66184585 + AluSg SINE Alu 1 292 -18 2673 208 122 41 chr20 483420 483833 -66184172 + L1MC4 LINE L1 7456 7982 -60 1731 172 3 0 chr20 483833 484123 -66183882 - AluJo SINE Alu -19 293 3 2673 208 122 41 chr20 484123 484188 -66183817 + L1MC4 LINE L1 7982 8040 -2 2468 234 114 22 chr20 484195 484965 -66183040 - L2 LINE L2 -1480 1834 994 445 292 17 17 chr20 484961 485081 -66182924 - MIR SINE MIR -129 133 14 * 182 88 0 29 chr20 485206 485240 -66182765 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 417 275 116 91 chr20 485353 485860 -66182145 - L2 LINE L2 -9 3304 2743 1323 151 50 107 chr20 485860 485982 -66182023 + AluJb SINE Alu 1 128 -184 2097 74 3 61 chr20 485982 486294 -66181711 + AluY SINE Alu 1 294 -17 1323 151 50 107 chr20 486294 486488 -66181517 + AluJb SINE Alu 128 299 -13 417 275 116 91 chr20 486488 486723 -66181282 - L2 LINE L2 -570 2743 2515 218 280 87 0 chr20 486974 487047 -66180958 + MIR SINE MIR 85 149 -59 1816 168 3 0 chr20 487084 487388 -66180617 + AluJb SINE Alu 1 305 -7 367 305 62 8 chr20 487425 487553 -66180452 - MIR3 SINE MIR -71 137 3 270 283 264 13 chr20 487639 487798 -66180207 + MIR SINE MIR 7 205 -57 924 245 138 47 chr20 487888 487991 -66180014 - MER20B DNA MER1_type -2 781 689 2255 79 0 3 chr20 487991 488283 -66179722 - AluSc SINE Alu -18 291 1 924 245 138 47 chr20 488283 488570 -66179435 - MER20B DNA MER1_type -94 689 342 2202 146 22 0 chr20 488570 488926 -66179079 + MLT1A1 LTR MaLR 2 365 0 924 245 138 47 chr20 488926 488983 -66179022 - MER20B DNA MER1_type -441 342 292 1874 134 22 116 chr20 488986 489168 -66178837 + L1MC2 LINE L1 5928 6125 -219 2031 77 0 71 chr20 489168 489504 -66178501 + AluSx SINE Alu 1 312 0 1874 134 22 116 chr20 489504 489715 -66178290 + L1MC2 LINE L1 6125 6277 -67 1494 183 33 36 chr20 489715 490016 -66177989 - AluJo SINE Alu -12 300 1 1874 134 22 116 chr20 490016 490069 -66177936 + L1MC2 LINE L1 6277 6333 -11 508 211 0 0 chr20 490095 490199 -66177806 - MER20B DNA MER1_type -494 289 186 287 325 25 42 chr20 490456 490581 -66177424 + MIR SINE MIR 41 163 -56 1269 256 153 9 chr20 490614 491059 -66176946 - L2 LINE L2 0 3313 2805 183 67 0 67 chr20 491344 491374 -66176631 - MER5A DNA MER1_type -35 154 127 320 155 17 17 chr20 491374 491432 -66176573 - AluJ/FLAM SINE Alu -244 58 1 255 238 95 29 chr20 491510 491615 -66176390 - MIR SINE MIR -67 141 30 319 288 85 72 chr20 491639 491792 -66176213 - MIR SINE MIR -29 233 79 226 321 205 9 chr20 491799 491911 -66176094 + MIR SINE MIR 16 149 -113 198 329 14 14 chr20 492259 492332 -66175673 + MIR SINE MIR 111 183 -79 550 269 45 6 chr20 492662 492818 -66175187 - MIR SINE MIR -38 224 63 925 214 78 79 chr20 493425 493958 -66174047 - L2 LINE L2 -1 3312 2771 2034 105 3 7 chr20 493958 494272 -66173733 - AluSx SINE Alu 0 312 5 925 214 78 79 chr20 494272 494422 -66173583 - L2 LINE L2 -542 2771 2622 228 274 57 47 chr20 494482 494588 -66173417 - MIR SINE MIR -10 252 146 783 184 13 13 chr20 494619 494777 -66173228 - L1MB5 LINE L1 0 6174 6017 418 267 0 9 chr20 494777 494882 -66173123 - MIR SINE MIR -98 164 61 2013 128 10 3 chr20 494972 495276 -66172729 - AluSq SINE Alu -7 306 1 2111 105 6 10 chr20 495303 495617 -66172388 + AluSp SINE Alu 1 313 0 248 220 121 26 chr20 495750 495924 -66172081 + MIR SINE MIR 9 248 -14 2130 105 0 0 chr20 496092 496407 -66171598 - AluSx SINE Alu 0 312 1 260 287 20 53 chr20 496683 496814 -66171191 + MIR SINE MIR 39 166 -62 454 138 0 0 chr20 497535 497600 -66170405 - AluSq/x SINE Alu -194 119 55 373 217 54 0 chr20 498058 498150 -66169855 + MIR SINE MIR 80 176 -86 2206 119 0 0 chr20 498861 499172 -66168833 - AluSx SINE Alu -1 311 1 2194 96 10 0 chr20 499627 499928 -66168077 - AluSg SINE Alu -6 304 1 1961 127 0 7 chr20 500030 500349 -66167656 + AluSx SINE Alu 1 317 0 1520 200 95 77 chr20 500372 500465 -66167540 - Charlie4a DNA MER1_type -1456 505 415 744 172 0 22 chr20 500465 500599 -66167406 - FLAM_C SINE Alu 0 133 3 1520 200 95 77 chr20 500599 501001 -66167004 - Charlie4a DNA MER1_type -1546 415 1 263 307 137 13 chr20 501060 501213 -66166792 - MIR3 SINE MIR -36 172 1 184 286 0 29 chr20 501738 501808 -66166197 + MIR SINE MIR 80 147 -115 181 311 40 0 chr20 502043 502117 -66165888 - L2 LINE L2 -131 3182 3106 184 242 326 5 chr20 502177 502367 -66165638 - L2 LINE L2 -351 2963 2713 261 296 74 9 chr20 502412 502520 -66165485 + MIR SINE MIR 31 145 -63 574 233 123 110 chr20 503248 503695 -66164310 + L2 LINE L2 2819 3271 -1 401 218 89 10 chr20 503702 503803 -66164202 - MIR SINE MIR -77 185 77 290 197 30 0 chr20 504287 504353 -66163652 + L3 LINE CR1 1405 1472 -105 232 174 22 0 chr20 504470 504516 -66163489 - Charlie8 DNA MER1_type -1003 1414 1368 783 245 180 11 chr20 504848 505126 -66162879 + LTR16C LTR ERVL 167 491 0 367 221 74 32 chr20 505744 505839 -66162166 - L2 LINE L2 -6 3266 3168 243 309 64 21 chr20 505911 506005 -66162000 - L2 LINE L2 -248 3065 2968 1724 170 3 19 chr20 506041 506358 -66161647 - AluJb SINE Alu 0 312 1 1244 238 31 48 chr20 506626 507034 -66160971 + MLT1J LTR MaLR 1 437 -74 2078 111 3 10 chr20 507093 507399 -66160606 + AluSx SINE Alu 9 312 0 474 340 0 13 chr20 507807 507966 -66160039 + MIR3 SINE MIR 45 201 -7 315 71 0 0 chr20 508057 508099 -66159906 + (CA)n Simple_repeat Simple_repeat 1 42 0 7692 31 0 0 chr20 508224 509526 -66158479 - L1PA5 LINE L1 -3 6151 4848 616 311 36 0 chr20 509529 509725 -66158280 + MIR SINE MIR 57 259 -3 363 335 55 0 chr20 509953 510117 -66157888 + MIR SINE MIR 90 262 0 954 80 7 0 chr20 510159 510297 -66157708 + L1MA2 LINE L1 6166 6304 0 242 274 59 13 chr20 510427 510580 -66157425 + (TTCA)n Simple_repeat Simple_repeat 4 163 0 * 439 220 27 65 chr20 510548 510734 -66157271 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 312 293 35 23 chr20 510681 510855 -66157150 + (TTCA)n Simple_repeat Simple_repeat 4 179 0 * 262 344 53 64 chr20 511117 511399 -66156606 - L2 LINE L2 0 3272 2994 2226 87 0 78 chr20 511407 511740 -66156265 - AluSx SINE Alu -5 307 1 234 279 58 19 chr20 511757 511861 -66156144 - MIR SINE MIR -67 141 34 1576 152 93 24 chr20 512118 512408 -66155597 + AluJo SINE Alu 1 310 -2 2058 146 7 0 chr20 512470 512765 -66155240 + AluSx SINE Alu 6 302 -10 483 291 0 33 chr20 512791 512942 -66155063 - MIR SINE MIR -14 248 103 2208 98 3 29 chr20 513300 513607 -66154398 - AluSx SINE Alu -11 301 3 1004 182 0 0 chr20 513668 513833 -66154172 + FRAM SINE Alu 1 165 -11 856 266 47 7 chr20 513839 514176 -66153829 - MLT1J LTR MaLR -135 376 6 224 284 68 34 chr20 514240 514328 -66153677 + L2 LINE L2 3133 3223 -49 267 219 24 37 chr20 514753 514835 -66153170 + CT-rich Low_complexity Low_complexity 4 84 0 248 270 11 0 chr20 514849 514938 -66153067 + L1MC4 LINE L1 6614 6703 -1339 313 203 17 0 chr20 515084 515143 -66152862 + L1MC4 LINE L1 6644 6703 -1339 210 143 0 0 chr20 515143 515178 -66152827 + (TG)n Simple_repeat Simple_repeat 1 35 0 464 317 10 63 chr20 515178 515383 -66152622 - L2 LINE L2 -18 3295 3102 2361 102 3 0 chr20 515452 515756 -66152249 - AluSg SINE Alu -5 305 1 1153 218 17 59 chr20 515760 515994 -66152011 - LTR37A LTR ERV1 -8 418 207 1798 140 13 39 chr20 515994 516301 -66151704 - AluJb SINE Alu -13 299 1 1153 218 17 59 chr20 516301 516470 -66151535 - LTR37A LTR ERV1 -219 207 32 243 312 26 0 chr20 516540 516617 -66151388 - L2 LINE L2 -31 3241 3163 5411 137 30 16 chr20 516697 517695 -66150310 - Tigger3b DNA MER2_type 0 1231 220 1518 94 5 0 chr20 517695 517887 -66150118 - AluSp SINE Alu -12 301 109 1664 169 55 48 chr20 517894 518314 -66149691 - MER113 DNA MER1_type? -74 447 25 266 214 14 0 chr20 518354 518424 -66149581 - MIR3 SINE MIR -54 154 84 1356 276 45 17 chr20 518826 519246 -66148759 + MLT1K LTR MaLR 61 492 -96 1268 204 6 100 chr20 519281 519294 -66148711 - AluSp SINE Alu -6 307 294 216 0 0 0 chr20 519294 519318 -66148687 + (TTAAA)n Simple_repeat Simple_repeat 4 27 0 1268 204 6 100 chr20 519318 519643 -66148362 - AluSp SINE Alu -19 294 1 284 98 98 0 chr20 519645 519696 -66148309 - FLAM SINE Alu -3 130 75 258 32 0 0 chr20 519713 519744 -66148261 + (CA)n Simple_repeat Simple_repeat 2 32 0 302 145 0 16 chr20 519746 519808 -66148197 + MLT1K LTR MaLR 525 585 -3 546 274 30 38 chr20 520171 520408 -66147597 - L2 LINE L2 -1 3312 3078 443 121 50 177 chr20 520417 520558 -66147447 + L1MB4 LINE L1 6058 6180 0 724 256 75 10 chr20 520565 520921 -66147084 - L2 LINE L2 -228 3085 2704 2134 129 7 0 chr20 521056 521350 -66146655 - AluSx SINE Alu -14 298 3 211 264 0 94 chr20 521823 521929 -66146076 + L2 LINE L2 3218 3313 0 549 330 24 5 chr20 521994 522200 -66145805 - MIR SINE MIR 0 262 53 1721 158 7 52 chr20 522356 522666 -66145339 - AluJo SINE Alu -16 296 1 2397 103 0 0 chr20 522678 522979 -66145026 - AluSx SINE Alu -11 301 1 446 281 39 59 chr20 523123 523326 -66144679 + L1MC4a LINE L1 5691 5889 -1919 1664 156 11 35 chr20 523328 523611 -66144394 - AluJb SINE Alu -36 276 1 321 281 39 55 chr20 523612 523740 -66144265 + L1MC4a LINE L1 5856 5981 -1827 426 221 0 10 chr20 523778 523882 -66144123 + MIR SINE MIR 158 260 -2 1349 57 0 0 chr20 523894 524052 -66143953 + AluY SINE Alu 146 303 -8 2317 108 0 6 chr20 524157 524471 -66143534 - AluSx SINE Alu 0 312 1 2059 152 10 0 chr20 524503 524812 -66143193 + AluJb SINE Alu 1 312 0 180 0 0 0 chr20 525055 525075 -66142930 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2286 116 7 0 chr20 525668 525978 -66142027 + AluSx SINE Alu 1 312 0 249 294 151 0 chr20 526052 526178 -66141827 + MIR SINE MIR 48 192 -70 292 275 90 3 chr20 526277 526466 -66141539 + MIR SINE MIR 2 262 0 308 270 73 36 chr20 526741 526878 -66141127 + L2 LINE L2 3162 3303 -10 488 246 183 6 chr20 526989 527164 -66140841 + MIR SINE MIR 32 237 -25 621 213 54 81 chr20 527213 527392 -66140613 + MIR SINE MIR 12 183 -79 2083 137 0 0 chr20 527392 527685 -66140320 - AluSx SINE Alu -18 294 2 621 213 54 81 chr20 527685 527763 -66140242 + MIR SINE MIR 183 262 0 239 277 50 10 chr20 527861 527962 -66140043 - MIR SINE MIR -76 132 28 902 232 31 105 chr20 528371 528581 -66139424 - L1MC4 LINE L1 0 8042 7881 1914 68 124 11 chr20 528581 528847 -66139158 - AluSg1 SINE Alu -13 296 1 902 232 31 105 chr20 528847 529085 -66138920 - L1MC4 LINE L1 -161 7881 7627 1915 142 28 3 chr20 529277 529566 -66138439 + AluJb SINE Alu 1 296 -16 198 308 33 0 chr20 529689 529780 -66138225 + MIR SINE MIR 34 127 -81 222 289 70 26 chr20 529840 529954 -66138051 + MIR SINE MIR 26 144 -64 364 318 128 5 chr20 530292 530503 -66137502 + L1MC4a LINE L1 5740 5976 -1832 686 200 13 26 chr20 530656 530811 -66137194 + L1ME3A LINE L1 6016 6168 -2 2436 88 3 0 chr20 530814 531110 -66136895 + AluSx SINE Alu 1 297 -15 1849 152 13 23 chr20 531178 531481 -66136524 + AluJo SINE Alu 1 300 -12 196 322 34 8 chr20 531826 531944 -66136061 - MIR3 SINE MIR -86 122 2 195 214 36 18 chr20 532252 532308 -66135697 + MIR SINE MIR 97 153 -55 182 363 99 0 chr20 532286 532377 -66135628 + L2 LINE L2 3163 3262 -10 * 553 91 0 0 chr20 532501 532578 -66135427 + FLAM_C SINE Alu 59 135 -8 313 283 78 6 chr20 533068 533234 -66134771 + L1MC4a LINE L1 5748 5925 -1883 192 135 0 0 chr20 533713 533750 -66134255 + (CA)n Simple_repeat Simple_repeat 1 37 0 335 317 43 6 chr20 534125 534289 -66133716 + L1MC4a LINE L1 5724 5893 -1915 1306 98 0 0 chr20 534415 534579 -66133426 - AluSc SINE Alu -24 285 122 220 265 84 12 chr20 535250 535333 -66132672 - MIR SINE MIR -100 108 20 274 222 0 42 chr20 535814 535886 -66132119 + MIR SINE MIR 104 172 -90 2417 83 0 7 chr20 535945 536247 -66131758 + AluSx SINE Alu 1 300 -12 574 279 131 18 chr20 536307 536536 -66131469 + MIR SINE MIR 8 262 0 290 297 187 7 chr20 537180 537335 -66130670 + MIR SINE MIR 37 219 -43 284 264 138 18 chr20 538652 538819 -66129186 + MIR SINE MIR 73 259 -3 22 70 0 0 chr20 539163 539206 -66128799 + GC_rich Low_complexity Low_complexity 1 43 0 232 205 51 17 chr20 539419 539536 -66128469 + (CCG)n Simple_repeat Simple_repeat 1 121 0 28 71 0 0 chr20 539689 539745 -66128260 + GC_rich Low_complexity Low_complexity 1 56 0 23 54 0 0 chr20 539773 539810 -66128195 + GC_rich Low_complexity Low_complexity 1 37 0 209 170 0 21 chr20 540044 540091 -66127914 + MIR SINE MIR 94 139 -69 352 265 106 41 chr20 540145 540315 -66127690 - MER5A DNA MER1_type -2 187 7 519 266 40 0 chr20 540432 540556 -66127449 - L2 LINE L2 -1 3312 3184 350 242 121 0 chr20 541742 541866 -66126139 + MIR SINE MIR 108 246 -16 419 258 177 43 chr20 542011 542310 -66125695 + L2 LINE L2 2834 3172 -141 * 453 200 0 0 chr20 542299 542379 -66125626 - L2 LINE L2 0 3313 3234 640 256 92 29 chr20 542433 542640 -66125365 - MIR SINE MIR -29 233 14 343 268 10 0 chr20 543438 543550 -66124455 - L1M3 LINE L1 -601 5579 5468 1921 79 12 0 chr20 543619 543860 -66124145 + AluSx SINE Alu 34 277 -35 225 0 0 0 chr20 543861 543886 -66124119 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 777 98 0 0 chr20 543885 543997 -66124008 + (TA)n Simple_repeat Simple_repeat 1 112 0 193 267 0 0 chr20 544165 544210 -66123795 - MIR SINE MIR 0 262 218 1513 199 59 3 chr20 544311 544633 -66123372 + MLT1F LTR MaLR 1 340 -202 241 157 12 108 chr20 544695 544713 -66123292 + MLT1G LTR MaLR 468 486 -104 1927 152 0 23 chr20 544713 545016 -66122989 + AluJo SINE Alu 1 296 -16 241 157 12 108 chr20 545016 545080 -66122925 + MLT1G LTR MaLR 486 590 0 893 259 95 39 chr20 545086 545422 -66122583 - MLT1J LTR MaLR -143 368 14 1053 215 18 0 chr20 545472 545695 -66122310 + MIR SINE MIR 15 241 -21 2015 124 28 0 chr20 545733 546023 -66121982 - AluSq SINE Alu -15 298 1 214 293 17 0 chr20 546139 546197 -66121808 + L2 LINE L2 3255 3313 0 388 263 20 72 chr20 546432 546557 -66121448 - MER103 DNA DNA -10 156 39 1704 192 10 45 chr20 546557 546870 -66121135 - AluJb SINE Alu -10 302 1 388 263 20 72 chr20 546870 546896 -66121109 - MER103 DNA DNA -127 39 13 756 219 115 0 chr20 547232 547415 -66120590 - MIR SINE MIR -3 259 56 1212 234 135 11 chr20 547797 548165 -66119840 + MLT1G LTR MaLR 168 577 -13 3069 191 16 35 chr20 548243 548768 -66119237 + MER82 DNA MER2_type 1 513 -140 2357 93 0 0 chr20 548768 549058 -66118947 - AluSc SINE Alu -19 290 1 3069 191 16 35 chr20 549058 549197 -66118808 + MER82 DNA MER2_type 513 653 0 533 238 41 17 chr20 549382 549572 -66118433 - MIR SINE MIR -44 218 25 193 171 0 0 chr20 549629 549664 -66118341 + L2 LINE L2 3216 3250 -22 252 155 197 14 chr20 550319 550390 -66117615 + MIR3 SINE MIR 81 164 -44 340 340 54 0 chr20 550483 550630 -66117375 - MIR SINE MIR -106 156 2 295 330 172 21 chr20 550651 550884 -66117121 + L2 LINE L2 2948 3215 -57 1934 156 0 3 chr20 550975 551258 -66116747 + AluJb SINE Alu 11 292 -20 1428 213 295 2 chr20 551258 551671 -66116334 + MLT1G LTR MaLR 57 590 0 976 230 113 54 chr20 551672 552361 -66115644 + L2 LINE L2 2570 3313 0 296 284 142 8 chr20 552965 553092 -66114913 + MIR SINE MIR 119 262 0 1875 168 6 22 chr20 553348 553663 -66114342 + AluJo SINE Alu 1 310 -2 595 285 7 0 chr20 553723 553874 -66114131 + MIR SINE MIR 45 196 -66 231 229 84 24 chr20 553882 553965 -66114040 - MIR SINE MIR -85 177 90 272 266 11 64 chr20 554329 554423 -66113582 + L1MC4a LINE L1 5524 5612 -2196 347 301 41 8 chr20 554426 554549 -66113456 - L2 LINE L2 -40 3273 3147 1194 233 106 65 chr20 554734 555253 -66112752 + MLT1H1 LTR MaLR 16 555 0 242 240 0 0 chr20 555256 555306 -66112699 + L1MC4a LINE L1 5611 5660 -510 449 337 30 0 chr20 555689 555891 -66112114 + L1MC4a LINE L1 5714 5921 -1887 2349 112 0 0 chr20 556386 556682 -66111323 - AluSg SINE Alu -14 296 1 1248 244 71 92 chr20 556712 557286 -66110719 + MLT1F1 LTR MaLR 6 567 0 711 95 0 63 chr20 557419 557545 -66110460 - AluSp/q SINE Alu -4 309 192 338 303 41 46 chr20 557602 557797 -66110208 - L1ME3A LINE L1 -284 5886 5693 345 284 81 51 chr20 557938 558135 -66109870 + L2 LINE L2 3108 3310 -3 202 276 86 0 chr20 558147 558205 -66109800 + MIR3 SINE MIR 104 166 -42 644 259 71 13 chr20 558340 558564 -66109441 - MIR SINE MIR 0 262 26 1749 148 7 14 chr20 558782 559060 -66108945 - AluJo SINE Alu -36 276 1 851 253 21 21 chr20 559063 559296 -66108709 - MIR SINE MIR -13 249 17 222 171 49 0 chr20 559471 559512 -66108493 + polypurine Low_complexity Low_complexity 5 47 0 502 333 146 23 chr20 559581 559721 -66108284 + L2 LINE L2 2820 2942 -330 2355 107 0 7 chr20 559721 560029 -66107976 + AluSx SINE Alu 2 307 -5 502 333 146 23 chr20 560029 560273 -66107732 + L2 LINE L2 2942 3251 -21 194 274 20 0 chr20 560304 560355 -66107650 + L2 LINE L2 3221 3272 0 547 303 7 7 chr20 560539 560694 -66107311 + MIR SINE MIR 77 231 -31 2493 185 27 119 chr20 560742 561204 -66106801 - L1MC4 LINE L1 0 8042 7539 1949 123 32 0 chr20 561204 561488 -66106517 - AluSx SINE Alu -18 294 2 2493 185 27 119 chr20 561488 561545 -66106460 - L1MC4 LINE L1 -503 7539 7478 183 42 0 0 chr20 561545 561569 -66106436 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2183 89 3 3 chr20 561573 561855 -66106150 - AluSq SINE Alu -31 282 1 2493 185 27 119 chr20 561855 562277 -66105728 - L1MC4 LINE L1 -567 7475 7182 279 335 56 6 chr20 562385 562564 -66105441 - L1MC4a LINE L1 -1791 6017 5830 262 247 0 27 chr20 562618 562691 -66105314 - MIR3 SINE MIR -51 157 87 230 269 115 31 chr20 563215 563345 -66104660 + MIR3 SINE MIR 16 156 -52 602 205 214 3 chr20 564544 564716 -66103289 - MIR SINE MIR -32 230 25 441 245 31 44 chr20 565053 565212 -66102793 + MIR3 SINE MIR 20 176 -32 237 263 0 18 chr20 565202 565259 -66102746 + L2 LINE L2 3008 3063 -209 * 225 264 0 0 chr20 565329 565382 -66102623 - L2 LINE L2 -4 3268 3216 198 220 40 0 chr20 565418 565468 -66102537 + L2 LINE L2 3262 3313 0 746 219 36 101 chr20 565504 565892 -66102113 - MER113 DNA MER1_type? 0 521 159 805 198 6 6 chr20 565953 566125 -66101880 + L1ME1 LINE L1 5986 6157 -9 1726 146 47 7 chr20 566150 566424 -66101581 + AluSx SINE Alu 1 285 -27 405 54 0 0 chr20 566424 566480 -66101525 + (CCA)n Simple_repeat Simple_repeat 3 58 0 298 179 0 0 chr20 566489 566545 -66101460 - MER113 DNA MER1_type? -432 89 34 252 310 0 0 chr20 566573 566644 -66101361 + (TGAA)n Simple_repeat Simple_repeat 3 73 0 421 323 127 31 chr20 566653 566882 -66101123 - L3 LINE CR1 -74 1503 1253 560 307 157 16 chr20 566943 567249 -66100756 - L2 LINE L2 -92 3221 2873 1593 168 3 46 chr20 567451 567600 -66100405 + AluJo SINE Alu 1 132 -180 2224 100 7 7 chr20 567600 567900 -66100105 + AluSg SINE Alu 1 300 -10 1593 168 3 46 chr20 567900 568053 -66099952 + AluJo SINE Alu 132 290 -22 766 314 46 0 chr20 568083 568322 -66099683 + MIR SINE MIR 12 261 -1 2037 116 14 0 chr20 568516 568809 -66099196 - AluSx SINE Alu -15 297 1 2231 106 0 0 chr20 568995 569297 -66098708 - AluSg SINE Alu -8 302 1 930 258 122 48 chr20 569329 570013 -66097992 + L2 LINE L2 2517 3267 -46 341 154 31 0 chr20 570394 570459 -66097546 - MIR SINE MIR -92 170 104 606 188 56 42 chr20 570480 570624 -66097381 + MIR SINE MIR 117 262 0 286 241 24 12 chr20 570632 570715 -66097290 - MIR SINE MIR -149 113 30 1572 177 33 20 chr20 570727 571027 -66096978 + AluJo SINE Alu 5 308 -4 203 170 21 0 chr20 571040 571087 -66096918 + (CAA)n Simple_repeat Simple_repeat 3 50 0 247 293 15 21 chr20 571497 571832 -66096173 + (GGGTG)n Simple_repeat Simple_repeat 1 332 0 229 361 0 50 chr20 572171 572290 -66095715 + MIR SINE MIR 76 188 -74 180 125 0 0 chr20 572725 572757 -66095248 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 274 298 21 22 chr20 572949 573129 -66094876 + L1MC/D LINE L1 5483 5642 -524 303 336 35 0 chr20 573149 573265 -66094740 + L1MC/D LINE L1 5710 5829 -1979 760 251 138 10 chr20 573275 573390 -66094615 - L2 LINE L2 0 3313 3214 1803 157 7 20 chr20 573390 573695 -66094310 + AluJo SINE Alu 1 301 -11 760 251 138 10 chr20 573695 573870 -66094135 - L2 LINE L2 -99 3214 2986 31 44 0 0 chr20 574094 574139 -66093866 + AT_rich Low_complexity Low_complexity 1 45 0 1554 170 20 30 chr20 574156 574456 -66093549 + AluJo SINE Alu 1 297 -15 899 150 0 0 chr20 574499 574632 -66093373 + AluSq/x SINE Alu 1 133 -180 190 271 47 35 chr20 574774 574859 -66093146 - L2 LINE L2 -179 3093 3008 220 314 127 17 chr20 575355 575473 -66092532 - MIR SINE MIR -72 190 60 720 185 7 46 chr20 575549 575978 -66092027 + MER5A DNA MER1_type 2 146 -43 1660 151 65 4 chr20 575662 575941 -66092064 + AluJb SINE Alu 1 296 -16 303 284 62 80 chr20 575941 576018 -66091987 - MER5A DNA MER1_type -97 92 15 1395 136 36 0 chr20 576040 576291 -66091714 - L1MD3 LINE L1 -3 7992 7733 1654 234 29 39 chr20 576776 577259 -66090746 + MLT1H LTR MaLR 72 549 0 446 300 62 23 chr20 577529 577786 -66090219 + MLT1J LTR MaLR 234 500 -11 183 347 41 10 chr20 577911 578009 -66089996 - MIR SINE MIR -112 150 50 415 143 24 12 chr20 578484 578568 -66089437 - MER63 DNA MER1_type -303 759 675 284 283 121 46 chr20 578598 578771 -66089234 - L2 LINE L2 -34 3279 3094 2271 108 0 0 chr20 578831 579136 -66088869 + AluSx SINE Alu 1 305 -7 894 226 51 23 chr20 579155 579372 -66088633 + MIR SINE MIR 36 258 -4 806 328 128 18 chr20 579377 579922 -66088083 - L2 LINE L2 -337 2977 2373 364 331 143 11 chr20 580018 580193 -66087812 + MIR SINE MIR 2 199 -63 209 271 102 129 chr20 580229 580269 -66087736 - L2 LINE L2 -39 3233 3193 2198 192 90 13 chr20 580269 580737 -66087268 + MLT1D LTR MaLR 2 505 0 209 271 102 129 chr20 580737 580835 -66087170 - L2 LINE L2 -79 3193 3094 2123 83 0 0 chr20 580835 581112 -66086893 + AluSx SINE Alu 23 299 -13 209 271 102 129 chr20 581112 581304 -66086701 - L2 LINE L2 -178 3094 2911 439 279 168 37 chr20 581328 581626 -66086379 - L2 LINE L2 -41 3272 2936 473 328 108 4 chr20 581940 582172 -66085833 + MIR SINE MIR 7 262 0 448 232 49 44 chr20 582172 582308 -66085697 - MIR3 SINE MIR -36 172 34 34 65 0 0 chr20 582504 582566 -66085439 + GC_rich Low_complexity Low_complexity 1 62 0 25 0 0 0 chr20 582661 582686 -66085319 + GC_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr20 582946 582969 -66085036 + GC_rich Low_complexity Low_complexity 1 23 0 968 260 14 9 chr20 583100 583319 -66084686 - MIR SINE MIR -32 230 11 713 265 69 46 chr20 584181 584305 -66083700 - MLT1L LTR MaLR -40 575 455 2054 127 7 0 chr20 584305 584597 -66083408 + AluSx SINE Alu 1 294 -18 713 265 69 46 chr20 584597 584778 -66083227 - MLT1L LTR MaLR -160 455 263 503 298 0 0 chr20 584794 584945 -66083060 + L2 LINE L2 2830 2980 -333 478 233 47 23 chr20 584950 585079 -66082926 - MIR SINE MIR -4 258 127 336 174 92 18 chr20 585281 585390 -66082615 + LTR16C LTR ERVL 375 491 0 695 244 80 10 chr20 585434 585635 -66082370 + MIR SINE MIR 45 259 -3 311 185 43 33 chr20 585703 585795 -66082210 - MLT1K LTR MaLR 0 588 496 1184 274 40 44 chr20 585900 586401 -66081604 - MLT1J LTR MaLR -12 499 1 371 312 53 48 chr20 586568 586757 -66081248 - L2 LINE L2 -5 3308 3119 606 173 18 0 chr20 586778 586888 -66081117 - MLT1A1 LTR MaLR 0 365 254 623 145 8 69 chr20 586890 587021 -66080984 + MLT1A1 LTR MaLR 17 139 -226 423 107 0 0 chr20 587021 587077 -66080928 - Alu SINE Alu -16 296 241 1914 196 25 27 chr20 587077 587517 -66080488 + MLT-int LTR MaLR 180 618 -1117 368 148 0 0 chr20 587671 587732 -66080273 + MLT-int LTR MaLR 681 741 -994 2137 145 25 27 chr20 587945 588353 -66079652 + MLT1A2-int LTR MaLR 1317 1723 -12 565 110 33 0 chr20 588372 588463 -66079542 + MLT1A2 LTR MaLR 1 94 -280 374 214 36 0 chr20 588565 588649 -66079356 - MLT1L LTR MaLR -337 278 192 1835 112 0 12 chr20 589500 589588 -66078417 + AluSx SINE Alu 48 136 -176 2106 109 16 0 chr20 589588 589891 -66078114 + AluSc SINE Alu 1 308 -1 1835 112 0 12 chr20 589891 590061 -66077944 + AluSx SINE Alu 136 303 -9 264 304 205 9 chr20 590434 590546 -66077459 - L3 LINE CR1 -117 1460 1327 261 128 0 0 chr20 592025 592072 -66075933 + (TAAA)n Simple_repeat Simple_repeat 1 47 0 266 168 50 40 chr20 593550 593651 -66074354 + C-rich Low_complexity Low_complexity 5 106 0 335 295 144 29 chr20 594126 594301 -66073704 - MIR SINE MIR -63 145 3 348 233 0 92 chr20 594313 594433 -66073572 + MIR SINE MIR 105 213 -49 * 481 269 71 0 chr20 594405 594546 -66073459 - MIR SINE MIR -1 261 111 271 248 297 0 chr20 594623 594724 -66073281 + L2 LINE L2 3142 3272 0 242 288 72 27 chr20 595447 595558 -66072447 + L2 LINE L2 3155 3270 -2 523 239 238 12 chr20 595846 596037 -66071968 - MIR SINE MIR 0 262 35 313 259 170 0 chr20 596031 596143 -66071862 + L2 LINE L2 3140 3270 -2 * 453 254 44 0 chr20 596398 596512 -66071493 + MIR SINE MIR 3 121 -141 657 284 91 0 chr20 596555 596752 -66071253 - MIR SINE MIR 0 262 48 268 255 122 10 chr20 597239 597337 -66070668 + MIR3 SINE MIR 74 182 -26 422 214 255 0 chr20 597434 597579 -66070426 + MIR SINE MIR 81 262 0 294 116 0 0 chr20 597664 597707 -66070298 + MIR SINE MIR 81 123 -85 309 266 45 103 chr20 597863 598047 -66069958 + MIR SINE MIR 18 182 -49 196 222 48 32 chr20 598353 598416 -66069589 - MIR SINE MIR -86 122 59 323 380 83 8 chr20 598637 598875 -66069130 - MIR SINE MIR 0 262 1 248 200 46 15 chr20 599980 600045 -66067960 + MIR SINE MIR 84 150 -112 325 316 98 0 chr20 600349 600482 -66067523 - MIR3 SINE MIR -14 194 49 408 88 0 0 chr20 601800 601857 -66066148 + (TG)n Simple_repeat Simple_repeat 1 57 0 332 89 0 63 chr20 602128 602207 -66065798 + (TCCC)n Simple_repeat Simple_repeat 2 75 0 488 262 93 27 chr20 602739 602922 -66065083 - MIR3 SINE MIR -3 205 11 294 182 0 0 chr20 603745 603811 -66064194 + CT-rich Low_complexity Low_complexity 2 67 0 378 0 0 0 chr20 603811 603853 -66064152 + (CA)n Simple_repeat Simple_repeat 1 42 0 429 20 0 0 chr20 604100 604150 -66063855 + (TG)n Simple_repeat Simple_repeat 2 51 0 202 138 69 35 chr20 605004 605062 -66062943 + (CGCGG)n Simple_repeat Simple_repeat 2 61 0 413 300 6 38 chr20 605376 605598 -66062407 + GA-rich Low_complexity Low_complexity 1 214 0 209 176 0 0 chr20 606180 606214 -66061791 + G-rich Low_complexity Low_complexity 3 36 0 1741 149 0 35 chr20 606706 607017 -66060988 + AluJo SINE Alu 8 308 0 1482 97 5 5 chr20 607304 607511 -66060494 - AluSq SINE Alu -16 297 91 430 273 95 15 chr20 607574 607836 -66060169 + L2 LINE L2 2856 3200 -72 892 245 10 0 chr20 607861 608057 -66059948 + MIR SINE MIR 59 256 -6 720 280 93 59 chr20 608116 608470 -66059535 - L2 LINE L2 -61 3252 2887 207 69 0 0 chr20 608531 608560 -66059445 + (TGAA)n Simple_repeat Simple_repeat 3 31 0 455 309 161 38 chr20 609241 609558 -66058447 + L1ME4a LINE L1 5624 5979 -142 2253 92 0 0 chr20 609621 609913 -66058092 + AluSc SINE Alu 1 292 -17 804 243 106 25 chr20 610157 610392 -66057613 + MIR SINE MIR 9 262 0 216 300 0 17 chr20 610390 610450 -66057555 - MIR SINE MIR -56 206 148 * 196 300 43 0 chr20 610688 610758 -66057247 + MIR SINE MIR 81 153 -55 371 266 201 7 chr20 610797 610951 -66057054 + MIR3 SINE MIR 20 203 -5 1172 286 104 7 chr20 611206 611629 -66056376 - LTR16B LTR ERVL 0 464 1 984 266 20 4 chr20 611647 611899 -66056106 - MIR SINE MIR -5 257 2 237 235 147 29 chr20 612052 612154 -66055851 + L2 LINE L2 2889 3002 -270 920 244 33 8 chr20 612220 612462 -66055543 - MIR SINE MIR -5 257 10 371 259 36 36 chr20 612560 612672 -66055333 + L2 LINE L2 3201 3312 -1 2401 109 0 0 chr20 612841 613152 -66054853 + AluSx SINE Alu 1 311 -1 1881 173 7 3 chr20 613425 613731 -66054274 - AluJo SINE Alu -5 307 1 402 283 17 0 chr20 613731 613860 -66054145 + MIR SINE MIR 43 175 -62 181 276 19 67 chr20 613904 614009 -66053996 - MIR3 SINE MIR -27 181 82 345 324 150 19 chr20 614426 614639 -66053366 + MIR SINE MIR 22 262 0 291 279 45 9 chr20 614861 614972 -66053033 - MIR SINE MIR -58 204 90 1914 155 13 10 chr20 614973 615108 -66052897 + AluSx SINE Alu 1 134 -178 441 0 0 0 chr20 615108 615157 -66052848 + (TAA)n Simple_repeat Simple_repeat 2 50 0 1914 155 13 10 chr20 615157 615355 -66052650 + AluSx SINE Alu 134 312 0 802 280 85 0 chr20 615384 615570 -66052435 - L2 LINE L2 -14 3299 3081 2719 30 0 0 chr20 615570 615868 -66052137 + AluY SINE Alu 1 298 -13 802 280 85 0 chr20 615868 615952 -66052053 - L2 LINE L2 -232 3081 3006 334 250 52 59 chr20 616135 616271 -66051734 + MIR SINE MIR 93 227 -35 466 320 31 35 chr20 616448 616676 -66051329 + LTR67 LTR ERVL 236 462 -95 284 293 71 0 chr20 616852 616951 -66051054 + L2 LINE L2 3208 3313 0 588 341 14 9 chr20 616957 617171 -66050834 - L3 LINE CR1 -398 1179 965 476 281 43 7 chr20 617313 617452 -66050553 + MER117 DNA MER1_type 1 144 -53 1308 172 15 11 chr20 617491 617758 -66050247 + Charlie4 DNA MER1_type 8 275 -1686 264 282 128 40 chr20 617943 618092 -66049913 - L2 LINE L2 -196 3076 2915 390 316 11 17 chr20 618967 619144 -66048861 + MIR SINE MIR 9 184 -78 467 208 87 54 chr20 619218 619367 -66048638 - L2 LINE L2 0 3313 3160 495 253 139 21 chr20 619382 619576 -66048429 + L1MC4 LINE L1 5620 5836 -1972 357 150 0 0 chr20 619586 619646 -66048359 - FLAM_A SINE Alu 0 133 74 5802 217 70 33 chr20 620046 620231 -66047774 + L1MC4 LINE L1 6459 6636 -1406 423 0 0 0 chr20 620231 620278 -66047727 + (TG)n Simple_repeat Simple_repeat 1 47 0 5802 217 70 33 chr20 620278 621618 -66046387 + L1MC4 LINE L1 6636 8040 -2 613 283 62 0 chr20 621636 621876 -66046129 - L2 LINE L2 -152 3161 2907 953 211 29 5 chr20 621876 622085 -66045920 - MLT1E2 LTR MaLR 0 626 413 240 111 0 0 chr20 622085 622121 -66045884 + (T)n Simple_repeat Simple_repeat 1 36 0 1428 206 45 13 chr20 622131 622510 -66045495 - HUERS-P3 LTR ERV1 -8453 466 1 617 157 35 76 chr20 622510 622682 -66045323 - LTR19C LTR ERV1 0 779 615 * 780 207 181 50 chr20 622657 622922 -66045083 - MLT1E2 LTR MaLR -178 448 138 2508 131 33 17 chr20 622922 623150 -66044855 - MSTB LTR MaLR 0 426 186 2131 142 0 6 chr20 623150 623461 -66044544 - AluSx SINE Alu -3 309 1 2508 131 33 17 chr20 623461 623651 -66044354 - MSTB LTR MaLR -240 186 1 780 207 181 50 chr20 623651 623684 -66044321 - MLT1E2 LTR MaLR -488 138 111 451 156 142 78 chr20 623683 623824 -66044181 - MLT1E2 LTR MaLR -504 150 1 * 236 203 51 0 chr20 623826 623905 -66044100 - L2 LINE L2 -360 2912 2830 320 283 22 22 chr20 624606 624744 -66043261 - L1MC4a LINE L1 -1910 5898 5761 949 268 92 9 chr20 624982 625553 -66042452 - L1MC4a LINE L1 -461 5701 5067 768 219 128 45 chr20 625561 625586 -66042419 - L1ME4a LINE L1 -153 5968 5946 2429 73 0 7 chr20 625586 625889 -66042116 - AluY SINE Alu -9 302 2 768 219 128 45 chr20 625889 626237 -66041768 - L1ME4a LINE L1 -175 5946 5564 1714 128 23 79 chr20 626680 626985 -66041020 - AluJb SINE Alu -20 292 5 324 249 76 49 chr20 627172 627357 -66040648 - MER113 DNA MER1_type? -331 190 1 330 258 23 62 chr20 627578 627706 -66040299 - MIR SINE MIR -71 191 69 208 301 49 65 chr20 627824 627947 -66040058 - MIR SINE MIR 0 262 142 374 287 19 83 chr20 627982 628198 -66039807 - L2 LINE L2 -93 3220 3019 2519 81 0 3 chr20 628343 628650 -66039355 + AluSx SINE Alu 1 306 -6 370 253 44 0 chr20 628938 629029 -66038976 + MER91A DNA MER1_type 102 196 0 200 283 33 0 chr20 629794 629854 -66038151 - MIR SINE MIR -122 140 79 1725 138 18 25 chr20 630052 630334 -66037671 - AluJo SINE Alu -2 310 31 262 260 26 13 chr20 630471 630548 -66037457 + GA-rich Low_complexity Low_complexity 4 81 0 1790 89 133 0 chr20 630574 630822 -66037183 + AluSp SINE Alu 1 281 -32 207 0 0 0 chr20 630822 630845 -66037160 + (CAAT)n Simple_repeat Simple_repeat 4 26 0 185 91 0 30 chr20 630860 630893 -66037112 + (GGAA)n Simple_repeat Simple_repeat 2 33 0 654 270 11 0 chr20 631440 631625 -66036380 + MIR SINE MIR 43 229 -33 873 264 231 19 chr20 631861 631972 -66036033 + MLT1G LTR MaLR 10 96 -494 2176 75 24 27 chr20 631972 632285 -66035720 + AluSx SINE Alu 1 312 0 873 264 231 19 chr20 632285 632625 -66035380 + MLT1G LTR MaLR 96 588 -2 561 284 27 0 chr20 632629 632777 -66035228 - MIR SINE MIR -62 200 49 1482 255 56 33 chr20 633290 633718 -66034287 - MLT1J LTR MaLR 0 511 74 284 340 78 5 chr20 633794 633985 -66034020 + L2 LINE L2 2684 2888 -426 2236 119 3 0 chr20 634484 634777 -66033228 - AluSp SINE Alu -19 294 1 274 246 111 18 chr20 634778 634895 -66033110 - MIR SINE MIR -67 141 25 363 246 97 15 chr20 634969 635103 -66032902 - MIR3 SINE MIR -41 167 23 555 199 7 59 chr20 635115 635251 -66032754 - L2 LINE L2 -2 3311 3183 733 275 83 29 chr20 635345 635730 -66032275 - L2 LINE L2 -79 3234 2829 278 241 89 0 chr20 636262 636341 -66031664 + MIR3 SINE MIR 81 166 -42 838 244 43 26 chr20 636349 636579 -66031426 + MIR SINE MIR 29 262 0 363 295 108 23 chr20 636794 636923 -66031082 - MIR3 SINE MIR -27 181 42 1847 157 0 32 chr20 637662 637974 -66030031 - AluJo SINE Alu -10 302 1 282 227 213 57 chr20 637982 638123 -66029882 - MIR SINE MIR -17 245 83 2162 206 23 59 chr20 638259 638832 -66029173 + MER92C LTR ERV1 1 552 -2 185 318 94 57 chr20 638863 639055 -66028950 + MIR SINE MIR 63 261 -1 30 27 0 0 chr20 639441 639478 -66028527 + GC_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr20 639560 639582 -66028423 + GC_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr20 640532 640556 -66027449 + (TG)n Simple_repeat Simple_repeat 2 25 0 209 59 59 0 chr20 641866 641900 -66026105 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 6365 234 82 48 chr20 641975 642123 -66025882 - L1MEc LINE L1 -3573 2642 2501 2361 94 0 7 chr20 642123 642420 -66025585 - AluSg SINE Alu -15 295 1 6365 234 82 48 chr20 642420 642951 -66025054 - L1MEc LINE L1 -3714 2501 1990 2161 113 25 0 chr20 642951 643234 -66024771 + AluSx SINE Alu 3 292 -20 6365 234 82 48 chr20 643234 645076 -66022929 - L1MEc LINE L1 -4225 1990 40 768 245 57 74 chr20 645078 645520 -66022485 - L2 LINE L2 -275 3038 2583 359 266 22 36 chr20 645541 645680 -66022325 + L1ME3A LINE L1 5991 6127 -43 631 279 11 0 chr20 645757 645940 -66022065 - L2 LINE L2 -710 2604 2420 275 296 99 0 chr20 645934 646015 -66021990 - MIR SINE MIR -17 245 157 * 803 290 120 3 chr20 646031 646331 -66021674 + MLT1K LTR MaLR 254 588 0 1900 170 3 0 chr20 646415 646703 -66021302 - AluJo SINE Alu -23 289 1 293 355 29 6 chr20 647054 647226 -66020779 + L2 LINE L2 2917 3092 -180 316 258 45 38 chr20 647405 647537 -66020468 + MIR3 SINE MIR 15 147 -61 726 228 151 15 chr20 647537 647743 -66020262 + MIR SINE MIR 2 235 -27 466 223 17 0 chr20 647851 647974 -66020031 + MIR3 SINE MIR 31 158 -50 2376 67 3 3 chr20 648087 648416 -66019589 + AluSq SINE Alu 1 329 0 221 327 44 0 chr20 648829 648942 -66019063 + MIR SINE MIR 34 151 -57 278 313 133 5 chr20 648994 649190 -66018815 - LTR16B LTR ERVL -228 222 3 205 273 0 0 chr20 649687 649731 -66018274 + (CA)n Simple_repeat Simple_repeat 2 45 0 528 239 159 0 chr20 649778 649941 -66018064 - MER5A DNA MER1_type 0 189 1 456 324 96 7 chr20 650020 650329 -66017676 - LTR16B LTR ERVL -136 328 31 323 299 95 7 chr20 650355 650492 -66017513 - MIR SINE MIR -22 240 92 266 214 135 0 chr20 650566 650655 -66017350 - MIR SINE MIR -112 150 50 194 196 0 43 chr20 650745 650791 -66017214 - MIR SINE MIR -59 149 106 1420 226 164 5 chr20 651387 651776 -66016229 + MLT1F1 LTR MaLR 109 559 -8 482 274 38 0 chr20 652724 652925 -66015080 + CT-rich Low_complexity Low_complexity 1 208 0 710 253 6 0 chr20 652930 653092 -66014913 + MIR SINE MIR 10 172 -90 520 223 122 0 chr20 653645 653784 -66014221 - MIR SINE MIR -19 243 88 189 0 0 0 chr20 653784 653805 -66014200 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 213 261 0 31 chr20 653842 653907 -66014098 - MIR SINE MIR -103 105 43 2419 96 0 0 chr20 654066 654368 -66013637 - AluSx SINE Alu -10 302 1 401 210 0 0 chr20 654387 654468 -66013537 - MIR SINE MIR -111 151 71 200 139 0 23 chr20 654727 654770 -66013235 + (TTCC)n Simple_repeat Simple_repeat 3 44 0 403 58 0 0 chr20 654808 654860 -66013145 + Alu SINE Alu 1 52 -258 2532 84 3 0 chr20 655140 655451 -66012554 + AluSp SINE Alu 1 312 -1 264 307 58 2 chr20 655600 655728 -66012277 - MIR SINE MIR -55 153 50 221 271 32 47 chr20 655783 655895 -66012110 - MIR SINE MIR -85 123 13 805 190 226 0 chr20 655963 656184 -66011821 - LTR37B LTR ERV1 -1 467 197 387 236 0 11 chr20 656247 656336 -66011669 - LTR37B LTR ERV1 -377 91 4 302 60 100 0 chr20 656910 657010 -66010995 + (TA)n Simple_repeat Simple_repeat 2 111 0 315 49 0 0 chr20 657010 657051 -66010954 + (GA)n Simple_repeat Simple_repeat 2 42 0 2333 38 0 45 chr20 657051 657342 -66010663 - AluSp SINE Alu -34 279 2 212 236 121 73 chr20 658599 658764 -66009241 + L2 LINE L2 2569 2741 -573 2071 120 33 10 chr20 658830 659130 -66008875 + AluSx SINE Alu 1 307 -5 291 28 0 0 chr20 659157 659193 -66008812 + (TCC)n Simple_repeat Simple_repeat 1 36 0 1676 117 140 0 chr20 659193 659458 -66008547 - AluSx SINE Alu 0 302 1 1251 246 35 85 chr20 659459 659652 -66008353 - MLT1J LTR MaLR -67 444 282 2220 106 3 0 chr20 659652 659945 -66008060 - AluY SINE Alu -17 294 1 1251 246 35 85 chr20 659945 660174 -66007831 - MLT1J LTR MaLR -229 282 43 2317 110 0 0 chr20 660184 660476 -66007529 + AluSx SINE Alu 1 292 -20 929 270 25 0 chr20 660530 660771 -66007234 + L1MC4a LINE L1 5619 5865 -1943 1893 224 49 29 chr20 660773 661283 -66006722 + L1ME2 LINE L1 5564 6083 -81 317 296 102 29 chr20 662116 662166 -66005839 - L2 LINE L2 -79 3234 3189 1486 216 82 44 chr20 662166 662579 -66005426 + MLT1C LTR MaLR 1 434 -33 2062 159 0 9 chr20 662579 662894 -66005111 - AluSx SINE Alu 0 312 1 1486 216 82 44 chr20 662894 662930 -66005075 + MLT1C LTR MaLR 434 467 0 317 296 102 29 chr20 662930 662985 -66005020 - L2 LINE L2 -124 3189 3139 279 0 0 0 chr20 662985 663016 -66004989 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 317 296 102 29 chr20 663016 663115 -66004890 - L2 LINE L2 -174 3139 3014 252 0 0 0 chr20 664022 664050 -66003955 + (TG)n Simple_repeat Simple_repeat 2 29 0 561 182 0 0 chr20 664056 664144 -66003861 - FLAM_A SINE Alu -25 117 30 612 171 17 0 chr20 664164 664281 -66003724 - L1ME1 LINE L1 -56 6110 5992 2140 138 7 0 chr20 664335 664639 -66003366 + AluSx SINE Alu 1 306 -6 284 197 30 0 chr20 664646 664712 -66003293 + MLT1C LTR MaLR 40 107 -398 732 264 70 13 chr20 664712 664939 -66003066 + MLT1C LTR MaLR 228 467 0 1806 210 18 13 chr20 664939 665335 -66002670 - L1ME1 LINE L1 -187 5979 5582 1166 140 0 17 chr20 665335 665513 -66002492 + AluSg/x SINE Alu 133 307 -5 1835 161 0 13 chr20 665529 665827 -66002178 + AluJb SINE Alu 12 305 -7 314 137 0 0 chr20 665827 665878 -66002127 - L1ME1 LINE L1 -656 5586 5536 1131 130 243 45 chr20 665916 666163 -66001842 + AluYa5 SINE Alu 1 296 -15 266 160 160 40 chr20 666173 666248 -66001757 + MIR SINE MIR 150 233 -29 311 296 84 22 chr20 666393 666676 -66001329 - LTR16A LTR ERVL -2 448 123 344 273 62 45 chr20 666706 666882 -66001123 - Charlie8 DNA MER1_type -2226 191 13 2309 100 10 3 chr20 666905 667036 -66000969 + AluSq SINE Alu 1 130 -183 324 0 0 0 chr20 667036 667072 -66000933 + (TAA)n Simple_repeat Simple_repeat 2 37 0 2309 100 10 3 chr20 667072 667251 -66000754 + AluSq SINE Alu 130 313 0 214 309 37 12 chr20 667324 667405 -66000600 + L2 LINE L2 3189 3271 -42 918 157 28 15 chr20 667493 667692 -66000313 + L1M4 LINE L1 5290 5492 -686 2545 72 3 0 chr20 667714 668021 -65999984 + AluSp SINE Alu 1 308 -5 756 254 11 37 chr20 668029 668218 -65999787 + MIR SINE MIR 77 260 -2 521 281 33 0 chr20 668234 668387 -65999618 + MIR SINE MIR 51 208 -54 851 177 10 62 chr20 669480 669672 -65998333 - MIR SINE MIR 0 262 81 986 201 7 126 chr20 669702 669996 -65998009 - LTR8 LTR ERV1 -272 419 161 272 111 44 0 chr20 669988 670033 -65997972 - LTR8A LTR ERV1 -680 47 1 * 265 338 0 0 chr20 670033 670110 -65997895 - MIR SINE MIR -178 84 8 2365 99 0 0 chr20 670348 670650 -65997355 + AluSg SINE Alu 1 302 -8 2086 142 3 3 chr20 670728 671031 -65996974 + AluSx SINE Alu 1 303 -9 2159 122 165 8 chr20 671034 671404 -65996601 + MSTA LTR MaLR 1 428 0 767 213 77 0 chr20 671473 671642 -65996363 - MER63A DNA MER1_type -18 192 11 598 272 7 0 chr20 671679 671815 -65996190 + MIR SINE MIR 2 138 -124 396 0 0 0 chr20 672533 672577 -65995428 + (TC)n Simple_repeat Simple_repeat 1 44 0 279 0 0 0 chr20 672576 672607 -65995398 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 495 275 128 16 chr20 672768 673026 -65994979 + L2 LINE L2 2689 2975 -339 466 265 116 7 chr20 673084 673231 -65994774 + MIR SINE MIR 35 197 -65 300 260 215 10 chr20 673243 673391 -65994614 + MLT1G1 LTR MaLR 3 216 -379 3618 244 21 14 chr20 673391 674208 -65993797 + L1M4b LINE L1 3 825 -6034 2736 247 61 41 chr20 674213 674436 -65993569 + L1M4b LINE L1 1330 1547 -5412 2367 108 0 0 chr20 674436 674741 -65993264 + AluSx SINE Alu 1 305 -7 2736 247 61 41 chr20 674741 675582 -65992423 + L1M4b LINE L1 1547 2415 -4544 3128 243 32 47 chr20 675730 675993 -65992012 + L1M4b LINE L1 2476 2741 -4216 1606 161 19 58 chr20 675993 676304 -65991701 + AluSx SINE Alu 3 301 -11 3128 243 32 47 chr20 676304 676453 -65991552 + L1M4b LINE L1 2741 2891 -4066 2336 121 0 3 chr20 676453 676766 -65991239 + AluSx SINE Alu 1 312 0 3128 243 32 47 chr20 676766 677376 -65990629 + L1M4b LINE L1 2891 3509 -3448 2523 80 3 0 chr20 677376 677688 -65990317 + AluSp SINE Alu 1 313 0 3128 243 32 47 chr20 677688 677849 -65990156 + L1M4b LINE L1 3509 3671 -3286 2134 141 3 0 chr20 677849 678154 -65989851 - AluSx SINE Alu -4 308 3 3128 243 32 47 chr20 678154 678430 -65989575 + L1M4b LINE L1 3671 3852 -3105 2336 114 3 0 chr20 678431 678738 -65989267 + AluSx SINE Alu 1 308 -4 1258 117 11 0 chr20 678802 679010 -65988995 + AluY SINE Alu 119 311 0 1355 214 79 66 chr20 679012 679113 -65988892 + L1M4b LINE L1 3904 4002 -2955 2164 145 0 0 chr20 679113 679424 -65988581 + AluSx SINE Alu 1 311 -1 1355 214 79 66 chr20 679424 679626 -65988379 + L1M4b LINE L1 4002 4200 -2757 2225 125 0 3 chr20 679626 679938 -65988067 + AluY SINE Alu 1 311 0 1355 214 79 66 chr20 679938 680151 -65987854 + L1M4b LINE L1 4200 4428 -2529 822 220 53 62 chr20 680178 680526 -65987479 - MLT1H LTR MaLR -206 389 15 2125 115 62 42 chr20 680571 680885 -65987120 + THE1B LTR MaLR 1 325 -39 2106 108 7 0 chr20 680885 681217 -65986788 - AluSg SINE Alu 0 334 1 2125 115 62 42 chr20 681217 681258 -65986747 + THE1B LTR MaLR 325 364 0 232 238 0 32 chr20 681406 681469 -65986536 + MIR SINE MIR 161 221 -41 225 302 0 0 chr20 681517 681570 -65986435 + MIR SINE MIR 210 262 0 * 425 367 11 6 chr20 681526 681706 -65986299 - MIR SINE MIR -33 229 49 309 344 32 11 chr20 681777 681963 -65986042 + L1MC4a LINE L1 5696 5885 -1923 2296 107 7 13 chr20 682185 682600 -65985405 + AluSq SINE Alu 1 313 0 262 289 10 21 chr20 682614 682711 -65985294 - L1ME4a LINE L1 -96 6025 5930 1132 253 47 7 chr20 682718 683014 -65984991 - MLT1J LTR MaLR -193 318 11 1061 133 0 0 chr20 683124 683274 -65984731 - AluSg/x SINE Alu -23 287 138 1383 109 8 50 chr20 683274 683513 -65984492 - MER41B LTR ERV1 -277 358 130 1908 124 37 4 chr20 683954 684264 -65983741 + AluSx SINE Alu 1 319 0 4781 95 32 25 chr20 684639 684681 -65983324 + LTR8 LTR ERV1 2 42 -649 2309 84 14 7 chr20 684681 684978 -65983027 - AluSp SINE Alu -14 299 1 4781 95 32 25 chr20 684978 685620 -65982385 + LTR8 LTR ERV1 42 691 0 2315 114 3 0 chr20 685987 686284 -65981721 - AluSp SINE Alu -15 298 1 2153 144 0 10 chr20 686284 686589 -65981416 - AluJo SINE Alu -10 302 1 488 273 39 0 chr20 686771 686899 -65981106 - MIR SINE MIR -11 251 119 2969 158 74 31 chr20 687195 687653 -65980352 + MER67C LTR ERV1 1 497 -213 2184 124 14 0 chr20 687653 687944 -65980061 - AluSx SINE Alu -17 295 1 2969 158 74 31 chr20 687944 688132 -65979873 + MER67C LTR ERV1 497 675 -35 273 287 248 6 chr20 688159 688316 -65979689 + L1MC4a LINE L1 5741 5935 -1873 306 0 0 0 chr20 688384 688418 -65979587 + (TG)n Simple_repeat Simple_repeat 2 35 0 1920 155 3 10 chr20 688591 688888 -65979117 + AluSx SINE Alu 1 295 -17 1243 112 0 0 chr20 688888 689049 -65978956 + AluSg/x SINE Alu 132 292 -18 1989 138 24 14 chr20 689159 689455 -65978550 - AluSx SINE Alu -8 304 6 398 202 46 37 chr20 690018 690127 -65977878 - MIR SINE MIR -92 170 61 247 286 36 0 chr20 691466 691522 -65976483 + MIR SINE MIR 26 83 -179 764 266 68 8 chr20 692581 692818 -65975187 - MIR SINE MIR 0 262 12 317 346 76 11 chr20 693591 693776 -65974229 - MIR SINE MIR -52 210 14 1079 221 86 93 chr20 693992 694571 -65973434 + MER34C LTR ERV1 11 585 0 2055 128 14 0 chr20 695349 695645 -65972360 - AluSp SINE Alu -13 300 1 2152 75 78 8 chr20 695839 696207 -65971798 + LTR7 LTR ERV1 1 450 0 277 254 95 64 chr20 696207 696687 -65971318 + L1MC4a LINE L1 5260 5942 -1866 2234 108 3 0 chr20 696771 697066 -65970939 - AluY SINE Alu -15 296 1 748 246 48 22 chr20 697359 697587 -65970418 + MIR SINE MIR 29 262 0 260 329 162 9 chr20 698272 698488 -65969517 + L2 LINE L2 2933 3181 -91 636 233 135 10 chr20 698770 698963 -65969042 + MIR SINE MIR 32 248 -14 2325 109 0 0 chr20 699026 699330 -65968675 + AluSx SINE Alu 1 304 -8 726 226 113 95 chr20 699337 699463 -65968542 + MLT1J LTR MaLR 71 193 -318 2868 116 76 48 chr20 699463 699567 -65968438 - MER75 DNA T2_type 0 514 414 2077 123 3 7 chr20 699567 699869 -65968136 - AluSx SINE Alu -11 301 1 2868 116 76 48 chr20 699869 700264 -65967741 - MER75 DNA T2_type -100 414 1 726 226 113 95 chr20 700264 700527 -65967478 + MLT1J LTR MaLR 193 467 -44 1972 156 0 25 chr20 700549 700869 -65967136 + AluSx SINE Alu 1 312 0 181 161 0 97 chr20 701872 701934 -65966071 - L2 LINE L2 -301 2971 2916 209 196 0 0 chr20 701993 702039 -65965966 + T-rich Low_complexity Low_complexity 3 48 0 526 226 198 86 chr20 702059 702627 -65965378 - L2 LINE L2 0 3313 2616 687 224 88 43 chr20 702689 702885 -65965120 - MIR SINE MIR -32 230 30 232 264 61 74 chr20 703339 703487 -65964518 + L2 LINE L2 3077 3222 -91 241 277 8 46 chr20 703890 704020 -65963985 + GA-rich Low_complexity Low_complexity 2 126 0 248 294 61 49 chr20 704166 704329 -65963676 - MIR3 SINE MIR -37 171 7 * 299 298 24 0 chr20 704283 704367 -65963638 + MIR SINE MIR 58 143 -119 1924 155 3 19 chr20 704679 704989 -65963016 - AluJb SINE Alu -6 306 2 245 218 18 0 chr20 705734 705789 -65962216 + MIR SINE MIR 115 170 -92 649 279 53 0 chr20 705799 705989 -65962016 - MIR SINE MIR -2 260 61 2003 167 93 89 chr20 706023 706364 -65961641 - LTR8A LTR ERV1 0 727 381 2223 113 0 0 chr20 706364 706690 -65961315 + AluSx SINE Alu 1 326 0 2003 167 93 89 chr20 706690 706886 -65961119 - LTR8A LTR ERV1 -346 381 187 200 333 0 0 chr20 706956 707013 -65960992 + MIR SINE MIR 200 256 -6 1071 185 111 47 chr20 707181 707420 -65960585 + MER34C LTR ERV1 1 223 -493 2180 117 3 3 chr20 707420 707719 -65960286 - AluSq SINE Alu -8 305 7 1071 185 111 47 chr20 707719 707834 -65960171 + MER34C LTR ERV1 223 490 -226 428 210 92 8 chr20 707843 708017 -65959988 + LTR48 LTR ERV1 370 542 0 358 111 32 0 chr20 708039 708102 -65959903 + LTR24B LTR ERV1 8 72 -504 808 188 78 0 chr20 708135 708289 -65959716 - FRAM SINE Alu 0 166 1 1253 52 6 0 chr20 708291 708463 -65959542 + LTR19-int LTR ERV1 2085 2257 -3329 275 233 186 0 chr20 708463 708549 -65959456 - LTR8 LTR ERV1 -434 257 156 2989 55 30 30 chr20 708549 708750 -65959255 + LTR19A-int LTR ERV1 2346 2546 -3040 2151 105 14 3 chr20 708750 709046 -65958959 + AluSq SINE Alu 1 299 -14 2989 55 30 30 chr20 709046 709280 -65958725 + LTR19A-int LTR ERV1 2545 2781 -2805 * 10486 52 40 13 chr20 709278 709771 -65958234 - LTR19-int LTR ERV1 -1329 4257 3779 2357 91 3 10 chr20 709771 710079 -65957926 + AluSp SINE Alu 1 306 -7 10486 52 40 13 chr20 710079 710706 -65957299 - LTR19-int LTR ERV1 -1807 3779 3085 2236 96 7 7 chr20 710706 710999 -65957006 - AluY SINE Alu -18 293 1 10486 52 40 13 chr20 710999 711338 -65956667 - LTR19-int LTR ERV1 -2501 3085 2757 2170 107 4 0 chr20 711372 711653 -65956352 + AluSq SINE Alu 1 282 -31 8479 78 27 16 chr20 711662 712018 -65955987 + LTR19A-int LTR ERV1 4380 4731 -855 2260 121 3 7 chr20 712018 712325 -65955680 + AluSx SINE Alu 1 306 -6 8479 78 27 16 chr20 712325 713162 -65954843 + LTR19A-int LTR ERV1 4731 5586 0 3585 86 15 0 chr20 713162 713641 -65954364 + LTR19A LTR ERV1 1 486 0 3571 137 7 6 chr20 713662 714208 -65953797 - LTR10A LTR ERV1 -62 547 1 6843 182 23 21 chr20 714253 716649 -65951356 - LTR10A-int LTR ERV1 0 6649 4190 2161 69 0 0 chr20 716650 716924 -65951081 - AluSg SINE Alu -4 306 33 810 63 18 0 chr20 716924 717035 -65950970 - AluY SINE Alu -14 297 185 2430 253 54 12 chr20 717039 717633 -65950372 - HERVI LTR ERV1 -2456 5329 4711 * 5025 80 27 0 chr20 717600 718338 -65949667 - HERVI LTR ERV1 -4320 2576 1819 393 216 159 0 chr20 718343 718431 -65949574 + LTR8 LTR ERV1 156 257 -434 567 54 0 0 chr20 718431 718505 -65949500 - Harlequin LTR ERV1 -5178 1718 1645 * 1991 153 3 0 chr20 718504 718804 -65949201 - Harlequin LTR ERV1 -3205 4580 4280 249 204 102 46 chr20 718853 718961 -65949044 + LTR24B LTR ERV1 260 373 -203 2418 135 70 0 chr20 718961 719346 -65948659 - MER84 LTR ERVI 0 507 96 4953 99 34 57 chr20 719346 720143 -65947862 - MER4E LTR ERV1 0 779 1 1130 103 130 5 chr20 720143 720318 -65947687 + MER41B LTR ERV1 434 634 -1 513 66 66 13 chr20 720323 720399 -65947606 - MER84 LTR ERVI -427 80 1 1360 93 15 34 chr20 720456 720660 -65947345 + MER84 LTR ERVI 1 200 -307 1256 140 53 5 chr20 720661 720868 -65947137 + MER4E LTR ERV1 249 465 -314 817 106 0 0 chr20 720925 721029 -65946976 + MER84-int LTR ERV1 2030 2133 -2821 999 185 11 11 chr20 721029 721207 -65946798 + LTR1 LTR ERV1 1 178 -607 1823 167 149 46 chr20 721208 721705 -65946300 + LTR10A LTR ERV1 1 548 -61 772 226 88 33 chr20 721714 721988 -65946017 + LTR10A-int LTR ERV1 1 289 -6360 18573 219 11 28 chr20 722050 728562 -65939443 + LTR10A-int LTR ERV1 501 5708 -941 2250 74 0 35 chr20 728562 728872 -65939133 + AluY SINE Alu 1 299 -12 18573 219 11 28 chr20 728872 729799 -65938206 + LTR10A-int LTR ERV1 5708 6649 0 1850 188 77 70 chr20 729799 730343 -65937662 + LTR10A LTR ERV1 1 548 -61 371 127 0 0 chr20 730356 730411 -65937594 + LTR1 LTR ERV1 176 230 -555 764 170 17 21 chr20 730501 730796 -65937209 + LTR1B LTR ERV1 401 826 0 3961 124 23 20 chr20 730797 730980 -65937025 + MER4A-int LTR ERV1 2131 2312 -2642 1897 120 3 11 chr20 730980 731315 -65936690 + AluSx SINE Alu 1 333 0 3961 124 23 20 chr20 731315 731734 -65936271 + MER4A-int LTR ERV1 2312 2736 -2218 2159 112 0 0 chr20 731734 732030 -65935975 + AluSq SINE Alu 1 296 -17 17067 137 99 79 chr20 732139 732722 -65935283 + MER4A-int LTR ERV1 189 759 -5839 4668 122 19 59 chr20 732722 733011 -65934994 - MER4E LTR ERV1 0 779 480 1844 134 0 7 chr20 733011 733322 -65934683 - AluSx SINE Alu 0 309 1 4668 122 19 59 chr20 733322 733842 -65934163 - MER4E LTR ERV1 -299 480 2 17067 137 99 79 chr20 733842 734050 -65933955 + MER4A-int LTR ERV1 759 961 -5637 1201 170 14 0 chr20 734050 734262 -65933743 - AluSg/x SINE Alu -13 299 85 17067 137 99 79 chr20 734262 736638 -65931367 + MER4A-int LTR ERV1 961 3288 -3310 1997 120 3 0 chr20 736638 736944 -65931061 - AluSx SINE Alu 0 307 1 17067 137 99 79 chr20 736944 736962 -65931043 + MER4A-int LTR ERV1 3288 3304 -3294 2000 116 0 52 chr20 736962 737290 -65930715 - AluSx SINE Alu -1 311 1 17067 137 99 79 chr20 737290 737949 -65930056 + MER4A-int LTR ERV1 3304 3948 -2650 189 0 0 0 chr20 737949 737970 -65930035 + (TTA)n Simple_repeat Simple_repeat 1 21 0 17067 137 99 79 chr20 737970 739226 -65928779 + MER4A-int LTR ERV1 3948 6598 0 3154 130 121 47 chr20 739227 739846 -65928159 + MER4A LTR ERV1 1 465 0 2368 138 0 22 chr20 739846 740145 -65927860 + MER84 LTR ERVI 146 437 -70 2158 125 3 0 chr20 740145 740450 -65927555 - AluSq SINE Alu -6 307 2 2368 138 0 22 chr20 740450 740520 -65927485 + MER84 LTR ERVI 437 507 0 181 238 0 0 chr20 740688 740730 -65927275 - L3b LINE CR1 -198 1385 1344 212 145 0 48 chr20 740771 740806 -65927199 + (TTTAA)n Simple_repeat Simple_repeat 1 33 -26 2115 116 0 0 chr20 740806 741100 -65926905 - AluSq SINE Alu -19 294 1 212 145 0 48 chr20 741100 741126 -65926879 + (TTTAA)n Simple_repeat Simple_repeat 33 59 0 3784 177 39 58 chr20 741258 742231 -65925774 - LTR5 LTR ERVK -14 955 1 2090 132 3 0 chr20 742243 742554 -65925451 - AluSx SINE Alu 0 312 1 4032 134 3 23 chr20 742610 743258 -65924747 + MER41B LTR ERV1 1 635 0 231 369 18 18 chr20 743300 743411 -65924594 + L2 LINE L2 2941 3051 -221 2268 106 0 0 chr20 743552 743864 -65924141 - AluSp SINE Alu -1 312 1 1551 182 0 24 chr20 743916 744238 -65923767 - AluSx SINE Alu 0 315 1 636 232 55 76 chr20 744400 744689 -65923316 - L2 LINE L2 0 3313 3031 249 264 98 52 chr20 744836 744928 -65923077 - L1MC/D LINE L1 -2003 5805 5719 1903 125 14 0 chr20 744928 745225 -65922780 + AluSx SINE Alu 1 301 -11 249 264 98 52 chr20 745225 745306 -65922699 - L1MC/D LINE L1 -2089 5719 5624 287 218 117 5 chr20 745946 746055 -65921950 + AluJ/monomer SINE Alu 1 51 -257 324 48 0 0 chr20 746134 746176 -65921829 + (TG)n Simple_repeat Simple_repeat 1 42 0 1814 84 0 0 chr20 746176 746414 -65921591 - AluSg SINE Alu -33 277 40 1722 82 0 41 chr20 746610 746855 -65921150 - AluSq SINE Alu -78 235 1 222 86 0 0 chr20 746947 746977 -65921028 + (A)n Simple_repeat Simple_repeat 1 31 0 2121 123 0 0 chr20 746977 747287 -65920718 + AluSg SINE Alu 1 310 0 457 340 39 0 chr20 747308 747464 -65920541 + L3 LINE CR1 967 1128 -449 2169 60 39 0 chr20 747899 748183 -65919822 - AluSp SINE Alu -14 299 5 1894 55 65 31 chr20 748200 748492 -65919513 - AluY SINE Alu -9 302 1 742 190 17 0 chr20 748649 748823 -65919182 + CT-rich Low_complexity Low_complexity 4 180 0 1899 76 8 4 chr20 748828 749079 -65918926 - AluSx SINE Alu -23 289 38 187 228 139 0 chr20 749136 749237 -65918768 - L2 LINE L2 -814 2500 2386 619 138 36 7 chr20 749845 749983 -65918022 + CT-rich Low_complexity Low_complexity 3 144 0 1839 164 3 3 chr20 749985 750297 -65917708 - AluJb SINE Alu 0 312 1 334 267 176 6 chr20 750331 750507 -65917498 - L1MC4 LINE L1 -8 8034 7829 330 272 215 21 chr20 750590 750869 -65917136 + MER113 DNA MER1_type? 126 458 -63 685 303 56 19 chr20 751201 751468 -65916537 + L2 LINE L2 2994 3270 -2 2449 65 0 7 chr20 751564 751871 -65916134 - AluSq SINE Alu -8 305 1 532 266 89 87 chr20 751871 752310 -65915695 - L2 LINE L2 -3 3269 2830 220 279 25 0 chr20 753052 753131 -65914874 + MIR SINE MIR 67 147 -61 549 237 18 18 chr20 753186 753355 -65914650 + MER113 DNA MER1_type? 81 249 -272 1041 212 108 7 chr20 753358 753627 -65914378 + L1ME1 LINE L1 5871 6166 0 2083 115 10 10 chr20 753710 754022 -65913983 + AluSx SINE Alu 1 312 0 825 233 11 5 chr20 754073 754273 -65913732 + MLT1A2 LTR MaLR 188 389 -1 2042 132 0 19 chr20 754681 754992 -65913013 - AluSx SINE Alu -7 305 1 398 241 28 0 chr20 755043 755151 -65912854 + MER103 DNA DNA 2 112 -54 619 256 38 76 chr20 755294 755532 -65912473 - L2 LINE L2 -250 3063 2835 294 264 11 44 chr20 755711 755739 -65912266 - MIR SINE MIR -80 182 155 2271 120 22 27 chr20 755739 756105 -65911900 + THE1B LTR MaLR 1 364 0 294 264 11 44 chr20 756105 756167 -65911838 - MIR SINE MIR -107 155 95 225 98 0 73 chr20 756248 756289 -65911716 - MER5B DNA MER1_type -3 175 138 1002 208 162 8 chr20 756289 756611 -65911394 + MLT1F LTR MaLR 2 415 -127 1463 125 30 106 chr20 756715 757044 -65910961 + AluYb8 SINE Alu 1 304 -14 2168 81 37 0 chr20 757193 757490 -65910515 + AluSp SINE Alu 1 308 -5 1586 171 27 10 chr20 757499 757797 -65910208 + AluJb SINE Alu 1 303 -9 2204 107 0 0 chr20 757993 758293 -65909712 - AluSq SINE Alu -13 300 1 1725 221 119 26 chr20 759151 759613 -65908392 + MER69 DNA AcHobo 77 581 -645 560 196 214 0 chr20 759595 759673 -65908332 + MER69 DNA AcHobo 2279 2339 -187 * 1712 135 3 45 chr20 759673 759848 -65908157 - AluJo SINE Alu -3 309 151 2024 138 6 3 chr20 759848 760159 -65907846 - AluSx SINE Alu 0 312 1 1712 135 3 45 chr20 760159 760295 -65907710 - AluJo SINE Alu -161 151 11 560 196 214 0 chr20 760295 760384 -65907621 + MER69 DNA AcHobo 2339 2482 -44 2265 103 3 3 chr20 760385 760696 -65907309 + AluSq SINE Alu 1 311 -2 359 308 37 0 chr20 760856 760963 -65907042 + MIR SINE MIR 118 228 -34 1249 182 121 4 chr20 761467 761731 -65906274 + AluJo SINE Alu 5 299 -13 1889 131 28 0 chr20 761788 762078 -65905927 - AluSx SINE Alu -12 300 3 1904 161 3 0 chr20 762136 762447 -65905558 + AluJo SINE Alu 1 312 0 370 242 167 0 chr20 762583 762715 -65905290 - L1ME LINE L1 -347 5774 5621 263 279 0 0 chr20 762762 762830 -65905175 - MIR SINE MIR -92 116 49 257 119 24 0 chr20 763458 763500 -65904505 - MIR SINE MIR -64 144 102 271 325 75 8 chr20 764044 764164 -65903841 - MIR SINE MIR -101 161 34 270 147 250 0 chr20 764423 764491 -65903514 + MER96B DNA MER1_type? 1 85 -332 333 0 0 0 chr20 764575 764612 -65903393 + (TC)n Simple_repeat Simple_repeat 2 38 0 248 202 0 64 chr20 764612 764721 -65903284 - L1MC4 LINE L1 -1339 6703 6602 201 241 19 0 chr20 764728 764782 -65903223 + MIR SINE MIR 65 119 -89 646 244 127 27 chr20 765435 765656 -65902349 - MIR SINE MIR 0 262 20 3574 126 23 33 chr20 765690 766444 -65901561 - L1MB3 LINE L1 -15 6168 5333 2160 98 3 7 chr20 766453 766760 -65901245 - AluSg1 SINE Alu -3 306 1 479 293 75 0 chr20 766945 767078 -65900927 - MIR SINE MIR -97 165 23 193 300 0 0 chr20 767092 767152 -65900853 - L2 LINE L2 -280 2992 2933 865 219 25 15 chr20 767331 767459 -65900546 + L1MC4 LINE L1 7282 7414 -628 814 204 59 0 chr20 767459 767611 -65900394 + FRAM SINE Alu 4 164 -2 865 219 25 15 chr20 767611 767683 -65900322 + L1MC4 LINE L1 7414 7484 -558 239 79 26 0 chr20 767689 767727 -65900278 + (TTTC)n Simple_repeat Simple_repeat 3 41 0 531 249 175 46 chr20 767877 768227 -65899778 - L2 LINE L2 -107 3165 2776 616 95 0 0 chr20 768228 768312 -65899693 - AluY SINE Alu -10 301 218 238 219 0 24 chr20 768393 768467 -65899538 - MIR SINE MIR -61 147 89 977 200 24 5 chr20 768598 768808 -65899197 + MIR SINE MIR 46 259 -3 512 195 27 47 chr20 770203 770352 -65897653 + MIR SINE MIR 85 230 -32 341 330 23 29 chr20 771443 771616 -65896389 - MIR SINE MIR -29 233 62 21 0 0 0 chr20 771618 771639 -65896366 + GC_rich Low_complexity Low_complexity 1 21 0 335 249 42 132 chr20 772303 772568 -65895437 - L2 LINE L2 -5 3308 3068 238 202 108 0 chr20 772582 772648 -65895357 + MIR SINE MIR 72 144 -64 1013 207 5 19 chr20 772757 772965 -65895040 + MER3 DNA MER1_type 5 209 0 374 264 11 0 chr20 773669 773760 -65894245 + MIR SINE MIR 69 160 -102 203 160 13 80 chr20 774682 774757 -65893248 + (CCCCG)n Simple_repeat Simple_repeat 3 72 0 181 200 67 0 chr20 776171 776216 -65891789 + MIR SINE MIR 78 125 -83 224 200 150 80 chr20 777377 777477 -65890528 - L2 LINE L2 -61 3252 3146 183 342 72 18 chr20 778002 778113 -65889892 + MIR SINE MIR 34 150 -58 2088 125 0 0 chr20 778387 778684 -65889321 + AluSx SINE Alu 1 297 -15 753 123 25 16 chr20 778708 778830 -65889175 + L1PA8 LINE L1 6050 6172 0 351 268 79 8 chr20 778878 779011 -65888994 - L1MC4 LINE L1 -1 8041 7783 566 258 50 13 chr20 779158 779317 -65888688 - L1ME2 LINE L1 -13 6151 5987 542 159 62 41 chr20 779357 779502 -65888503 - HAL1 LINE L1 -71 2436 2289 375 23 0 0 chr20 779502 779546 -65888459 + (CA)n Simple_repeat Simple_repeat 1 44 0 2090 128 0 0 chr20 779552 779848 -65888157 - AluSx SINE Alu -16 296 1 790 265 50 14 chr20 779888 780107 -65887898 + MIR SINE MIR 18 244 -18 509 243 37 28 chr20 780148 780366 -65887639 - HAL1 LINE L1 -295 2212 1993 275 276 92 20 chr20 780510 780608 -65887397 - L2 LINE L2 -12 3301 3197 721 268 104 0 chr20 780945 781165 -65886840 - MIR SINE MIR -19 243 1 259 276 0 40 chr20 781280 781356 -65886649 - L2 LINE L2 0 3272 3200 195 42 0 0 chr20 781463 781487 -65886518 + (TG)n Simple_repeat Simple_repeat 1 24 0 526 273 166 49 chr20 781607 782017 -65885988 - MLT1H LTR MaLR 0 549 92 1940 108 4 0 chr20 782064 782333 -65885672 - AluSg SINE Alu -40 270 1 258 275 14 0 chr20 782348 782417 -65885588 - MLT1H LTR MaLR -476 73 4 283 313 78 23 chr20 782456 782584 -65885421 + MIR3 SINE MIR 34 168 -40 572 308 106 46 chr20 782618 782985 -65885020 - L2 LINE L2 -11 3261 2873 964 264 91 35 chr20 783061 783580 -65884425 + L2 LINE L2 2763 3313 0 186 246 49 49 chr20 783594 783655 -65884350 + MIR3 SINE MIR 7 67 -141 224 273 30 0 chr20 784137 784203 -65883802 - MIR SINE MIR -66 142 75 321 47 0 0 chr20 784251 784294 -65883711 + (TG)n Simple_repeat Simple_repeat 1 43 0 302 197 84 14 chr20 784354 784425 -65883580 + MIR SINE MIR 12 87 -175 2048 112 3 0 chr20 784548 784835 -65883170 + AluSg SINE Alu 1 288 -22 309 336 121 27 chr20 785384 785607 -65882398 + L1MC4a LINE L1 5690 5933 -1875 720 179 163 5 chr20 786231 786421 -65881584 - L2 LINE L2 0 3313 3094 1964 238 74 24 chr20 786441 786983 -65881022 - L1ME1 LINE L1 -1 6165 5597 939 251 128 46 chr20 787002 787264 -65880741 - L2 LINE L2 -244 3069 2830 1788 143 28 0 chr20 787264 787550 -65880455 - AluSx SINE Alu -18 294 1 939 251 128 46 chr20 787550 787855 -65880150 - L2 LINE L2 -483 2830 2456 1470 209 27 3 chr20 787864 788165 -65879840 + MLT1E3 LTR MaLR 316 623 -1 398 267 9 0 chr20 788173 788278 -65879727 - MIR3 SINE MIR -6 202 97 410 309 112 0 chr20 788586 788738 -65879267 + MIR SINE MIR 46 214 -48 201 261 54 33 chr20 788769 788861 -65879144 + MIR3 SINE MIR 104 197 -11 608 221 0 8 chr20 788861 788983 -65879022 + MIR SINE MIR 50 170 -92 266 188 206 31 chr20 789870 789967 -65878038 + MIR SINE MIR 4 116 -92 272 372 35 0 chr20 789988 790101 -65877904 - MIR SINE MIR -62 146 30 302 244 35 12 chr20 790266 790352 -65877653 - MIR SINE MIR -76 132 45 644 221 10 72 chr20 790558 790753 -65877252 - MIR SINE MIR -3 259 77 413 310 25 19 chr20 791088 791246 -65876759 + MIR SINE MIR 2 160 -102 608 283 97 77 chr20 791249 791702 -65876303 + MLT1J LTR MaLR 9 470 -41 2587 142 49 85 chr20 791702 791792 -65876213 - L1MC3 LINE L1 -28 7757 7665 1633 178 6 29 chr20 791792 792107 -65875898 + AluJo SINE Alu 1 308 -4 2587 142 49 85 chr20 792107 792607 -65875398 - L1MC3 LINE L1 -120 7665 7188 299 247 78 0 chr20 792609 792686 -65875319 - MLT1F1 LTR MaLR -440 127 45 1897 160 0 0 chr20 792927 793220 -65874785 + AluJb SINE Alu 1 293 -19 35 41 0 0 chr20 793225 793274 -65874731 + AT_rich Low_complexity Low_complexity 1 49 0 2816 211 30 13 chr20 793387 793990 -65874015 - MER90 LTR ERV1 -1 613 1 215 239 60 0 chr20 794295 794362 -65873643 - MIR3 SINE MIR -53 155 85 284 250 40 0 chr20 794860 794936 -65873069 + MIR SINE MIR 65 143 -119 283 238 38 0 chr20 794991 795071 -65872934 - MLT1L LTR MaLR 0 615 533 2115 141 0 0 chr20 795258 795570 -65872435 - AluSx SINE Alu 0 312 1 249 257 57 0 chr20 796369 796439 -65871566 - MIR SINE MIR 0 262 189 870 205 118 0 chr20 796574 796803 -65871202 + Charlie4a DNA MER1_type 100 355 -153 426 39 0 0 chr20 796829 796881 -65871124 + (TG)n Simple_repeat Simple_repeat 1 52 0 559 186 0 0 chr20 796881 796967 -65871038 - FLAM_A SINE Alu -30 112 27 2292 62 0 10 chr20 797002 797292 -65870713 - AluY SINE Alu -24 287 1 633 154 15 44 chr20 797293 797429 -65870576 + Charlie4a DNA MER1_type 363 494 -14 411 221 66 41 chr20 797432 797554 -65870451 - MIR SINE MIR -68 194 70 185 300 0 0 chr20 798300 798350 -65869655 + MIR SINE MIR 81 130 -78 1993 142 3 3 chr20 798355 798665 -65869340 - AluSx SINE Alu 0 312 3 963 306 146 3 chr20 799200 799563 -65868442 + MLT1K LTR MaLR 108 522 -66 2057 121 7 0 chr20 799657 799954 -65868051 + AluSx SINE Alu 1 299 -13 569 279 73 45 chr20 800239 800486 -65867519 - MIR SINE MIR -7 255 2 465 275 8 8 chr20 801476 801607 -65866398 - MER103 DNA DNA -12 154 24 201 111 56 0 chr20 802657 802693 -65865312 + G-rich Low_complexity Low_complexity 4 41 0 236 311 13 20 chr20 802881 803032 -65864973 + (TCTCTG)n Simple_repeat Simple_repeat 2 151 0 214 133 0 133 chr20 803177 803260 -65864745 + (TCTCTG)n Simple_repeat Simple_repeat 3 74 0 1746 167 3 23 chr20 804130 804429 -65863576 - AluJb SINE Alu -18 294 2 444 265 124 49 chr20 804476 804661 -65863344 - MIR SINE MIR -44 218 20 615 276 55 55 chr20 804876 805130 -65862875 + MIR SINE MIR 9 262 0 1951 122 3 50 chr20 805258 805579 -65862426 + AluJb SINE Alu 1 306 -6 578 286 93 6 chr20 805921 806103 -65861902 - MIR SINE MIR -14 248 51 1310 142 0 43 chr20 806261 806472 -65861533 + AluJb SINE Alu 87 288 -24 248 305 183 0 chr20 806602 806733 -65861272 + L3 LINE CR1 1419 1573 -4 551 227 188 0 chr20 806840 807016 -65860989 + MIR SINE MIR 48 256 -6 295 369 38 19 chr20 807070 807230 -65860775 - MIR3 SINE MIR -35 173 11 777 240 104 5 chr20 807970 808191 -65859814 + L1ME3 LINE L1 5918 6160 -2 29 70 0 0 chr20 808885 808942 -65859063 + AT_rich Low_complexity Low_complexity 1 57 0 198 270 84 25 chr20 809381 809494 -65858511 + MIR SINE MIR 33 147 -62 390 167 313 0 chr20 809500 809596 -65858409 + MIR SINE MIR 103 228 -34 1678 140 4 11 chr20 809738 810009 -65857996 + AluJo SINE Alu 25 293 -19 786 284 53 25 chr20 810044 810329 -65857676 + MLT1J1 LTR MaLR 153 445 -1 186 237 0 51 chr20 810769 810828 -65857177 - L2 LINE L2 -30 3242 3187 455 264 35 65 chr20 810830 811061 -65856944 - L2 LINE L2 -222 3050 2827 349 185 37 0 chr20 811335 811416 -65856589 - MIR SINE MIR -60 148 65 180 179 0 0 chr20 812197 812236 -65855769 + (CAA)n Simple_repeat Simple_repeat 3 41 0 651 254 42 69 chr20 812427 812644 -65855361 - MIR SINE MIR -32 230 20 537 220 42 8 chr20 813763 813881 -65854124 + L2 LINE L2 3149 3270 -2 263 240 10 94 chr20 814056 814152 -65853853 - MIR3 SINE MIR -30 178 91 249 259 0 12 chr20 814234 814315 -65853690 - MIR SINE MIR -75 133 54 306 339 83 39 chr20 814968 815222 -65852783 + L1ME LINE L1 5572 5836 -285 624 294 60 27 chr20 815577 815906 -65852099 + L1MC4a LINE L1 5612 5956 -1852 2080 173 3 0 chr20 815906 816271 -65851734 - MER47A DNA MER2_type 0 366 1 624 294 60 27 chr20 816271 816308 -65851697 + L1MC4a LINE L1 5956 5990 -1818 561 221 8 8 chr20 816318 816440 -65851565 + L2 LINE L2 3192 3313 0 21 36 0 0 chr20 817047 817075 -65850930 + AT_rich Low_complexity Low_complexity 1 28 0 273 125 0 0 chr20 817227 817275 -65850730 + L1MB8 LINE L1 6129 6176 -2 247 64 21 43 chr20 817290 817337 -65850668 + (GGAA)n Simple_repeat Simple_repeat 3 48 0 210 352 9 37 chr20 817422 817530 -65850475 + (CCCCAG)n Simple_repeat Simple_repeat 2 106 0 392 307 6 24 chr20 817540 817706 -65850299 + (CCCTAG)n Simple_repeat Simple_repeat 2 164 0 835 249 194 31 chr20 818017 818670 -65849335 + L2 LINE L2 2378 3178 -135 1756 198 21 0 chr20 818670 819009 -65848996 - MER7A DNA MER2_type 0 346 3 835 249 194 31 chr20 819009 819126 -65848879 + L2 LINE L2 3178 3275 -38 184 233 107 107 chr20 819289 819392 -65848613 + L2 LINE L2 3172 3274 -39 * 201 349 72 46 chr20 819369 819564 -65848441 - L2 LINE L2 -39 3233 3034 698 263 86 74 chr20 819904 820323 -65847682 + L2 LINE L2 2579 2991 -322 643 276 28 37 chr20 820326 820543 -65847462 + L2 LINE L2 3099 3313 0 265 265 36 24 chr20 820696 820779 -65847226 + MIR3 SINE MIR 119 202 -6 576 225 95 12 chr20 821255 821424 -65846581 + MER5A DNA MER1_type 3 185 -4 2107 138 3 0 chr20 821724 822020 -65845985 + AluJb SINE Alu 1 297 -15 680 168 61 0 chr20 822111 822242 -65845763 - FRAM SINE Alu -38 138 1 241 281 245 0 chr20 822307 822503 -65845502 + L2 LINE L2 1940 2183 -1131 967 228 109 16 chr20 822503 822911 -65845094 + Charlie4a DNA MER1_type 1 476 -32 353 294 112 61 chr20 823002 823298 -65844707 + L2 LINE L2 2244 2554 -760 2407 52 28 31 chr20 823401 823728 -65844277 - LTR17 LTR ERV1 -454 326 1 1607 71 5 0 chr20 823730 823941 -65844064 - HERV17 LTR ERV1 -3 8623 8412 220 186 129 43 chr20 824139 824209 -65843796 - MIR3 SINE MIR -47 161 86 243 310 23 0 chr20 824788 824875 -65843130 + MIR SINE MIR 47 135 -127 1422 253 75 10 chr20 825078 825477 -65842528 + L1ME1 LINE L1 5740 6164 -2 738 309 163 3 chr20 825585 825948 -65842057 - L2 LINE L2 -5 3308 2888 351 247 93 16 chr20 826052 826211 -65841794 + MIR SINE MIR 17 185 -62 1605 120 110 6 chr20 826287 826640 -65841365 + LTR7 LTR ERV1 1 450 0 1114 211 14 12 chr20 826640 827048 -65840957 + HERVH LTR ERV1 1 446 -7267 8945 141 10 39 chr20 827135 828662 -65839343 + HERVH LTR ERV1 808 2288 -5425 2435 66 0 20 chr20 828662 828963 -65839042 - AluY SINE Alu -16 295 1 8945 141 10 39 chr20 828963 829042 -65838963 + HERVH LTR ERV1 2288 2368 -5345 2064 119 0 12 chr20 829042 829369 -65838636 + HERVH LTR ERV1 2697 3019 -4694 1220 128 0 0 chr20 829358 829553 -65838452 + HERVH LTR ERV1 4335 4529 -3184 * 3289 88 7 0 chr20 829553 830010 -65837995 + HERVH LTR ERV1 6489 6948 -765 3330 107 5 59 chr20 830064 830636 -65837369 + HERVH LTR ERV1 7173 7713 0 2027 102 47 6 chr20 830636 831010 -65836995 + LTR7 LTR ERV1 1 450 0 1807 179 10 7 chr20 831041 831349 -65836656 + AluJb SINE Alu 1 309 -3 1638 254 37 22 chr20 831706 832194 -65835811 + Charlie4a DNA MER1_type 14 508 0 180 298 0 0 chr20 832228 832275 -65835730 + L2 LINE L2 3145 3191 -81 234 273 83 19 chr20 832304 832423 -65835582 - MIR SINE MIR -69 139 38 683 287 93 20 chr20 832665 833020 -65834985 + L2 LINE L2 2410 2790 -524 297 264 73 27 chr20 833316 833426 -65834579 - MIR3 SINE MIR -32 176 62 525 354 29 26 chr20 833742 834033 -65833972 - L1MC4a LINE L1 -1910 5898 5604 1686 144 0 36 chr20 834033 834310 -65833695 - AluJo SINE Alu -8 304 38 525 354 29 26 chr20 834310 834363 -65833642 - L1MC4a LINE L1 -2204 5604 5553 647 295 118 14 chr20 834505 834793 -65833212 + L2 LINE L2 2996 3313 0 211 283 120 0 chr20 835113 835205 -65832800 - L2 LINE L2 -1 3312 3210 510 276 205 0 chr20 835241 835426 -65832579 - MIR SINE MIR -27 235 13 2037 223 61 21 chr20 835438 835959 -65832046 + MLT1F LTR MaLR 1 542 0 251 185 148 56 chr20 836535 836643 -65831362 + L2 LINE L2 3188 3305 -8 546 229 127 13 chr20 836949 837106 -65830899 - MIR SINE MIR -9 253 79 525 358 63 36 chr20 837664 838111 -65829894 + L2 LINE L2 2812 3270 -2 312 305 29 0 chr20 838321 838426 -65829579 + MIR SINE MIR 33 140 -68 636 256 128 0 chr20 838449 838652 -65829353 + MIR SINE MIR 9 237 -25 320 276 114 0 chr20 838766 838871 -65829134 - MIR SINE MIR -72 190 74 811 316 9 0 chr20 838969 839197 -65828808 - MIR SINE MIR -11 251 22 769 254 94 5 chr20 839514 839727 -65828278 + MIR SINE MIR 19 250 -12 200 250 18 45 chr20 840967 841079 -65826926 + (CAGAGA)n Simple_repeat Simple_repeat 3 111 0 849 194 0 0 chr20 841085 841224 -65826781 + FRAM SINE Alu 7 145 -31 504 156 0 0 chr20 841228 841337 -65826668 + GA-rich Low_complexity Low_complexity 1 109 0 361 267 33 8 chr20 842005 842125 -65825880 + GA-rich Low_complexity Low_complexity 5 127 0 281 210 48 97 chr20 842291 842415 -65825590 + MIR3 SINE MIR 37 154 -54 201 121 0 0 chr20 842536 842569 -65825436 + (ATG)n Simple_repeat Simple_repeat 1 33 0 660 304 113 12 chr20 843508 843834 -65824171 - L2 LINE L2 0 3313 2955 215 297 115 11 chr20 843833 844015 -65823990 - L2 LINE L2 -526 2788 2588 * 860 283 121 42 chr20 844316 845112 -65822893 + L2 LINE L2 2437 3312 -1 255 239 0 0 chr20 846010 846098 -65821907 + (CA)n Simple_repeat Simple_repeat 1 88 0 209 373 32 0 chr20 846591 846717 -65821288 + MIR SINE MIR 16 145 -63 757 209 158 0 chr20 846785 846962 -65821043 + MIR SINE MIR 48 252 -10 682 252 7 0 chr20 847562 847709 -65820296 + MER45A DNA AcHobo 31 178 0 407 332 146 5 chr20 847830 848035 -65819970 + MIR SINE MIR 28 261 -1 1728 196 25 3 chr20 848045 848402 -65819603 + MLT1A1 LTR MaLR 1 365 0 300 111 0 0 chr20 848509 848554 -65819451 + (TTCC)n Simple_repeat Simple_repeat 2 46 0 2127 143 7 0 chr20 848559 848866 -65819139 - AluSx SINE Alu -3 309 1 211 288 157 65 chr20 848866 849019 -65818986 + L2 LINE L2 2687 2853 -461 1016 298 99 47 chr20 849640 850134 -65817871 - MLT1K LTR MaLR -45 543 24 278 144 45 117 chr20 850201 850312 -65817693 - MIR3 SINE MIR -21 187 85 219 149 0 0 chr20 850979 851019 -65816986 + MIR SINE MIR 115 153 -109 1365 262 139 43 chr20 851050 851553 -65816452 - MLT1G1 LTR MaLR -2 593 32 2104 130 0 0 chr20 851553 851887 -65816118 - AluSx SINE Alu 0 334 1 1365 262 139 43 chr20 851887 851921 -65816084 - MLT1G1 LTR MaLR -563 32 3 391 292 25 40 chr20 852543 852745 -65815260 - L1ME4a LINE L1 -1 6120 5922 888 118 0 0 chr20 852841 852968 -65815037 + FLAM_C SINE Alu 2 128 -5 2143 133 3 0 chr20 853005 853305 -65814700 + AluSx SINE Alu 1 301 -11 285 318 76 47 chr20 853630 854158 -65813847 - L1ME4a LINE L1 -202 5919 5379 1053 216 206 64 chr20 854172 854653 -65813352 + MLT1H LTR MaLR 1 549 0 399 275 107 0 chr20 854669 854800 -65813205 + MIR SINE MIR 59 203 -59 1911 145 22 19 chr20 855049 855360 -65812645 + AluSx SINE Alu 1 312 0 2905 195 20 4 chr20 855361 855899 -65812106 - MER41D LTR ERV1 -10 547 1 338 167 33 89 chr20 855902 855992 -65812013 - MER41D-int LTR ERV1 -10 7195 7111 2726 294 29 23 chr20 856132 856906 -65811099 - MER41D-int LTR ERV1 -260 7496 6714 5112 98 17 22 chr20 856906 857689 -65810316 - MER4E LTR ERV1 0 779 1 2726 294 29 23 chr20 857689 857838 -65810167 - MER41D-int LTR ERV1 -1042 6714 6567 971 283 16 35 chr20 857954 858321 -65809684 - MER41D-int LTR ERV1 -1401 6355 5996 607 124 72 0 chr20 858325 858422 -65809583 - MER49 LTR ERV1 -204 719 616 * 1048 190 27 81 chr20 858415 858710 -65809295 - MER49 LTR ERV1 -642 281 3 1555 163 38 7 chr20 858721 859083 -65808922 - MER41D-int LTR ERV1 -23 6735 6363 507 179 219 0 chr20 859072 859195 -65808810 - MER41D-int LTR ERV1 -625 6133 5984 * 735 159 0 138 chr20 859401 859515 -65808490 - MER41D-int LTR ERV1 -4167 3953 3875 1978 162 0 14 chr20 859515 859812 -65808193 - AluSx SINE Alu -18 294 2 735 159 0 138 chr20 859812 859892 -65808113 - MER41D-int LTR ERV1 -4245 3875 3786 2656 155 51 88 chr20 860074 861344 -65806661 - MER41D-int LTR ERV1 -2148 4183 1720 800 162 8 1 chr20 861842 861984 -65806021 - MER41D-int LTR ERV1 -3015 3661 1506 378 125 0 16 chr20 861974 862038 -65805967 - MER41D-int LTR ERV1 -568 1218 1156 * 25 65 0 0 chr20 862038 862084 -65805921 + AT_rich Low_complexity Low_complexity 1 46 0 2002 166 0 3 chr20 862088 862401 -65805604 + AluJo SINE Alu 1 312 0 1173 169 4 30 chr20 862411 862647 -65805358 - LTR57-int LTR ERVL -4658 685 456 313 176 67 28 chr20 863006 863107 -65804898 - MER41D-int LTR ERV1 -5851 95 1 2855 197 16 2 chr20 863107 863656 -65804349 - MER41D LTR ERV1 0 557 1 293 236 16 110 chr20 864300 864427 -65803578 + MIR SINE MIR 112 226 -36 184 323 0 15 chr20 864559 864624 -65803381 - MIR SINE MIR -63 145 82 451 286 82 15 chr20 864772 864978 -65803027 + MIR SINE MIR 28 247 -15 921 280 89 32 chr20 865232 865481 -65802524 + L2 LINE L2 2922 3200 -113 1745 193 22 16 chr20 865481 865551 -65802454 - MLT1A1 LTR MaLR 0 365 297 1968 123 41 10 chr20 865551 865844 -65802161 + AluSx SINE Alu 1 302 -10 1745 193 22 16 chr20 865844 866136 -65801869 - MLT1A1 LTR MaLR -68 297 1 921 280 89 32 chr20 866136 866257 -65801748 + L2 LINE L2 3200 3313 0 270 237 0 0 chr20 866278 866337 -65801668 - L2 LINE L2 -14 3258 3200 595 165 0 0 chr20 866435 866544 -65801461 + MSTA LTR MaLR 1 109 -319 364 227 114 8 chr20 866552 866684 -65801321 + L1M4 LINE L1 3804 3949 -2197 4980 58 0 0 chr20 866684 867322 -65800683 - L1PA7 LINE L1 -4 6150 5513 1941 148 34 0 chr20 867322 867646 -65800359 + MSTA LTR MaLR 94 428 0 362 298 69 23 chr20 867774 867905 -65800100 - MIR3 SINE MIR -63 145 9 313 242 88 0 chr20 868009 868100 -65799905 - MLT1K LTR MaLR -81 507 409 544 270 130 36 chr20 868269 868644 -65799361 + MLT1J LTR MaLR 59 511 0 226 269 39 39 chr20 869107 869211 -65798794 + MIR SINE MIR 24 127 -135 379 283 41 62 chr20 869407 869714 -65798291 + MLT1J2 LTR MaLR 31 408 -38 274 303 42 49 chr20 869996 870138 -65797867 - MIR SINE MIR -8 254 114 876 260 70 57 chr20 870226 870683 -65797322 - L2 LINE L2 -31 3282 2820 204 200 0 0 chr20 870859 870904 -65797101 + CT-rich Low_complexity Low_complexity 1 45 0 1037 240 80 96 chr20 871033 871241 -65796764 - MER41C LTR ERV1 -9 545 335 1946 135 17 3 chr20 871241 871529 -65796476 + AluJb SINE Alu 14 305 -7 1037 240 80 96 chr20 871529 871658 -65796347 - MER41C LTR ERV1 -219 335 205 2279 94 0 7 chr20 871658 871977 -65796028 - AluY SINE Alu 0 311 1 1037 240 80 96 chr20 871977 872189 -65795816 - MER41C LTR ERV1 -349 205 4 290 274 77 0 chr20 872192 872309 -65795696 + MIR3 SINE MIR 33 158 -50 * 479 264 74 0 chr20 872305 872426 -65795579 + MIR SINE MIR 61 190 -72 1428 145 137 24 chr20 872533 872788 -65795217 + AluJb SINE Alu 1 284 -28 4970 117 50 25 chr20 872788 873440 -65794565 - MER4D LTR ERV1 -38 865 186 2001 101 59 7 chr20 873440 873728 -65794277 - AluSx SINE Alu -9 303 1 4970 117 50 25 chr20 873728 873919 -65794086 - MER4D LTR ERV1 -717 186 1 427 273 97 3 chr20 874734 874914 -65793091 + MIR SINE MIR 11 249 -13 381 384 69 16 chr20 875267 875645 -65792360 - L1MC4a LINE L1 -1901 5907 5510 629 328 64 0 chr20 875877 876112 -65791893 + MIR SINE MIR 13 262 0 215 223 38 2 chr20 876633 876694 -65791311 + MIR SINE MIR 85 141 -67 343 333 8 25 chr20 877001 877121 -65790884 - L1MC4a LINE L1 -1878 5930 5813 869 138 31 25 chr20 877284 877444 -65790561 - THE1C LTR MaLR -45 330 170 338 256 124 16 chr20 877444 877573 -65790432 - L1MC4a LINE L1 -2043 5765 5623 1912 216 77 17 chr20 877578 878322 -65789683 + L1MC/D LINE L1 4930 5740 -743 1816 162 17 45 chr20 878325 878683 -65789322 - THE1C LTR MaLR 0 375 28 709 128 17 0 chr20 878683 878800 -65789205 + AluSc SINE Alu 178 296 -13 765 238 31 9 chr20 878803 879030 -65788975 - L2 LINE L2 -144 3169 2938 190 169 67 112 chr20 879604 879693 -65788312 + MIR SINE MIR 59 143 -65 369 316 117 23 chr20 879694 879960 -65788045 + L1ME LINE L1 5370 5660 -510 2142 141 3 0 chr20 880102 880472 -65787533 + AluSx SINE Alu 5 375 0 2461 99 0 0 chr20 880547 880859 -65787146 - AluSx SINE Alu 0 312 1 227 364 0 0 chr20 881139 881238 -65786767 + MIR SINE MIR 139 237 -25 322 333 72 9 chr20 881654 881877 -65786128 - MIR SINE MIR -15 247 5 654 312 48 82 chr20 882329 882738 -65785267 - L1MC4a LINE L1 -1748 6060 5682 2304 77 0 7 chr20 882738 883045 -65784960 - AluY SINE Alu 0 305 1 654 312 48 82 chr20 883045 883326 -65784679 - L1MC4a LINE L1 -2126 5682 5393 532 244 19 19 chr20 883522 883678 -65784327 + MIR SINE MIR 101 256 -6 517 200 86 100 chr20 883699 883825 -65784180 - MIR SINE MIR -1 261 138 2585 43 13 3 chr20 883825 884129 -65783876 + AluY SINE Alu 1 307 -4 517 200 86 100 chr20 884129 884212 -65783793 - MIR SINE MIR -124 138 55 588 223 104 75 chr20 884287 884542 -65783463 - MLT1G LTR MaLR -2 588 286 350 233 0 0 chr20 884938 885011 -65782994 + L2 LINE L2 3241 3313 0 185 328 31 0 chr20 885188 885252 -65782753 + MIR SINE MIR 186 251 -11 1733 209 0 0 chr20 885360 885671 -65782334 + AluJo SINE Alu 1 311 -1 313 198 22 77 chr20 886678 886769 -65781236 + L1MCa LINE L1 1979 2064 -4362 2161 129 10 3 chr20 886773 887075 -65780930 + AluJo SINE Alu 1 304 -8 183 80 0 0 chr20 887078 887103 -65780902 + (CA)n Simple_repeat Simple_repeat 2 26 0 297 253 21 32 chr20 887251 887346 -65780659 - MER5A DNA MER1_type -69 120 27 308 282 23 46 chr20 887384 887515 -65780490 - MIR SINE MIR -59 149 22 431 217 12 42 chr20 888477 888643 -65779362 + G-rich Low_complexity Low_complexity 5 165 0 184 149 85 0 chr20 888778 888825 -65779180 + MIR SINE MIR 82 132 -76 292 234 8 23 chr20 889426 889559 -65778446 + GA-rich Low_complexity Low_complexity 1 130 0 252 271 24 0 chr20 889575 889660 -65778345 + GA-rich Low_complexity Low_complexity 1 87 0 215 133 22 0 chr20 889675 889720 -65778285 + GA-rich Low_complexity Low_complexity 2 47 0 252 306 102 10 chr20 890314 890412 -65777593 - MIR SINE MIR 0 262 156 312 229 0 0 chr20 891173 891256 -65776749 + (CCCA)n Simple_repeat Simple_repeat 4 86 0 581 228 6 0 chr20 891269 891431 -65776574 + (CCCA)n Simple_repeat Simple_repeat 4 166 0 644 274 110 48 chr20 891448 891802 -65776203 - L2 LINE L2 0 3313 2938 182 273 0 0 chr20 892116 892160 -65775845 + MIR SINE MIR 47 90 -172 748 263 0 22 chr20 892229 892408 -65775597 + MIR SINE MIR 52 226 -36 434 328 149 13 chr20 892494 892869 -65775136 + MER20B DNA MER1_type 27 452 -331 605 254 12 12 chr20 892951 893124 -65774881 + MER20B DNA MER1_type 611 783 0 198 0 0 0 chr20 893548 893570 -65774435 + (CAGA)n Simple_repeat Simple_repeat 2 23 0 221 317 156 10 chr20 893761 893966 -65774039 - L2 LINE L2 -221 3051 2817 382 311 0 0 chr20 894082 894172 -65773833 - L1MC4 LINE L1 -1339 6703 6614 321 242 0 0 chr20 894204 894266 -65773739 - L1MC4 LINE L1 -1339 6703 6642 191 256 122 0 chr20 894299 894381 -65773624 - MIR SINE MIR -94 168 77 350 336 0 16 chr20 894438 894563 -65773442 - L2 LINE L2 0 3313 3191 656 270 20 15 chr20 895137 895341 -65772664 + L2 LINE L2 3109 3313 0 731 264 8 72 chr20 895741 895991 -65772014 - MIR SINE MIR -7 255 22 1675 158 44 11 chr20 895991 896306 -65771699 + AluJo SINE Alu 1 324 0 187 328 16 0 chr20 896928 896992 -65771013 - MIR SINE MIR -86 122 58 1931 244 16 5 chr20 897642 898068 -65769937 + MLT1J LTR MaLR 74 504 -7 1938 167 20 0 chr20 898444 898744 -65769261 + AluJo SINE Alu 1 306 -6 215 208 0 21 chr20 899656 899704 -65768301 + CT-rich Low_complexity Low_complexity 4 50 0 1827 160 10 10 chr20 900246 900552 -65767453 - AluJo SINE Alu -6 306 1 896 209 68 0 chr20 900602 900779 -65767226 - MER5A DNA MER1_type 0 189 1 437 255 47 63 chr20 900780 901078 -65766927 + L1ME3 LINE L1 5650 5948 -214 21 0 0 0 chr20 901172 901193 -65766812 + AT_rich Low_complexity Low_complexity 1 21 0 470 256 70 58 chr20 901430 901476 -65766529 + MLT1J LTR MaLR 19 63 -448 2061 133 0 3 chr20 901476 901776 -65766229 - AluJb SINE Alu -13 299 1 470 256 70 58 chr20 901776 901901 -65766104 + MLT1J LTR MaLR 63 192 -319 298 225 62 12 chr20 902417 902497 -65765508 - MIR SINE MIR -63 145 62 294 283 71 10 chr20 902712 902811 -65765194 - MIR3 SINE MIR -28 180 76 1653 99 5 14 chr20 902850 903121 -65764884 - AluSg/x SINE Alu 0 334 66 564 269 78 42 chr20 903947 904336 -65763669 + MLT1K LTR MaLR 150 588 0 233 192 77 0 chr20 905115 905167 -65762838 - L2 LINE L2 -3 3269 3214 578 244 75 12 chr20 905192 905352 -65762653 + MIR SINE MIR 79 248 -14 270 298 230 12 chr20 905438 905599 -65762406 + MIR SINE MIR 47 242 -20 576 253 101 17 chr20 906236 906414 -65761591 + Charlie8 DNA MER1_type 84 276 -2141 1084 144 11 11 chr20 906527 906715 -65761290 - MER5A DNA MER1_type 0 189 2 594 245 14 14 chr20 906733 906880 -65761125 + MIR SINE MIR 36 182 -80 668 296 5 23 chr20 907587 907807 -65760198 + MIR SINE MIR 41 256 -6 574 274 121 18 chr20 908365 908588 -65759417 + L2 LINE L2 2341 2586 -728 444 308 100 23 chr20 908591 908763 -65759242 + L2 LINE L2 2842 2999 -314 1410 281 7 26 chr20 908763 909215 -65758790 + LTR47B LTR ERVL 1 443 0 444 308 100 23 chr20 909215 909393 -65758612 + L2 LINE L2 2999 3219 -94 509 227 59 0 chr20 909506 909625 -65758380 - MIR SINE MIR -101 161 36 234 158 18 70 chr20 910145 910202 -65757803 - MER5A DNA MER1_type 0 189 136 203 273 0 18 chr20 910451 910506 -65757499 - MIR SINE MIR -99 163 110 2142 120 3 0 chr20 910653 910945 -65757060 + AluSx SINE Alu 1 293 -19 212 0 0 35 chr20 910948 910977 -65757028 + (TAAAA)n Simple_repeat Simple_repeat 5 32 0 227 239 0 0 chr20 911954 912000 -65756005 + L2 LINE L2 3261 3306 -7 224 313 24 12 chr20 912583 912666 -65755339 + MIR SINE MIR 23 106 -102 219 197 167 15 chr20 913037 913103 -65754902 + MIR SINE MIR 105 180 -82 520 232 96 0 chr20 913224 913349 -65754656 - MIR SINE MIR -85 177 41 2211 115 0 10 chr20 913466 913762 -65754243 + AluSg SINE Alu 1 293 -17 360 250 22 0 chr20 914152 914244 -65753761 + MIR3 SINE MIR 82 175 -33 1081 144 7 7 chr20 914253 914760 -65753245 + (TCCA)n Simple_repeat Simple_repeat 1 685 0 232 234 0 0 chr20 914760 914807 -65753198 - L2 LINE L2 0 3313 3267 252 314 0 12 chr20 914911 914997 -65753008 + L2 LINE L2 3188 3272 0 321 282 27 46 chr20 916164 916393 -65751612 + L1M3 LINE L1 5258 5484 -680 240 327 30 0 chr20 916458 916559 -65751446 - MIR SINE MIR -65 143 40 250 236 236 11 chr20 916817 916906 -65751099 + MIR SINE MIR 32 140 -122 1998 151 0 16 chr20 916916 917221 -65750784 + AluJo SINE Alu 3 302 -10 709 257 229 12 chr20 917250 917880 -65750125 - L2 LINE L2 -2 3270 2497 189 244 183 37 chr20 917870 917952 -65750053 + MIR SINE MIR 163 256 -6 * 2271 123 0 0 chr20 917953 918261 -65749744 - AluSx SINE Alu -4 308 1 470 282 93 39 chr20 918637 918854 -65749151 + MIR SINE MIR 16 243 -19 182 273 23 0 chr20 918882 918926 -65749079 + L2 LINE L2 3250 3294 -19 206 280 0 0 chr20 919131 919181 -65748824 + MIR SINE MIR 114 163 -99 418 297 30 13 chr20 919331 919534 -65748471 - MIR SINE MIR -19 243 38 555 165 31 0 chr20 919842 919969 -65748036 + CT-rich Low_complexity Low_complexity 2 132 0 219 129 0 0 chr20 919973 920004 -65748001 + (TC)n Simple_repeat Simple_repeat 2 32 0 732 203 0 0 chr20 920517 920650 -65747355 - FLAM_A SINE Alu 0 133 1 463 300 150 40 chr20 920898 921351 -65746654 + L1M2 LINE L1 1737 4247 -2601 365 0 0 0 chr20 921674 921725 -65746280 - AluSp/q SINE Alu 0 303 253 229 229 16 16 chr20 921736 921797 -65746208 - MIR SINE MIR -122 140 80 366 280 134 25 chr20 921988 922145 -65745860 - MIR SINE MIR -42 220 47 421 217 0 0 chr20 922252 922335 -65745670 - MIR SINE MIR -117 145 63 343 277 21 43 chr20 922885 923026 -65744979 + MIR SINE MIR 47 184 -78 245 209 23 105 chr20 923042 923128 -65744877 + MIR SINE MIR 7 85 -177 346 171 29 0 chr20 923129 923199 -65744806 + MER116 DNA Mariner 4 75 -5 355 173 62 12 chr20 923207 923288 -65744717 + MIR SINE MIR 108 192 -70 722 238 132 5 chr20 923308 923497 -65744508 + MIR SINE MIR 13 225 -37 2183 118 0 24 chr20 923977 924274 -65743731 - AluSx SINE Alu -22 290 1 218 293 94 12 chr20 924447 924576 -65743429 + MIR3 SINE MIR 56 202 -6 275 369 15 0 chr20 924734 924864 -65743141 + MIR SINE MIR 60 191 -71 251 343 157 0 chr20 925044 925178 -65742827 + MIR SINE MIR 28 182 -80 231 323 0 0 chr20 925283 925345 -65742660 + (CA)n Simple_repeat Simple_repeat 2 63 0 258 143 77 55 chr20 925347 925438 -65742567 + MER112 DNA MER1_type 60 152 -108 448 228 43 0 chr20 925505 925597 -65742408 + MER58C DNA MER1_type 118 213 -2 356 102 0 17 chr20 925617 925676 -65742329 + (CATTC)n Simple_repeat Simple_repeat 2 59 0 272 220 34 0 chr20 925955 926014 -65741991 - MER58 DNA MER1_type -25 2395 130 236 309 0 15 chr20 926079 926147 -65741858 + L2 LINE L2 3235 3301 -12 379 262 82 33 chr20 926418 926540 -65741465 + MIR SINE MIR 24 151 -111 180 188 0 0 chr20 926804 926836 -65741169 - L2 LINE L2 -19 3294 3263 247 328 35 34 chr20 927164 927342 -65740663 - MIR3 SINE MIR -64 144 12 347 316 85 24 chr20 927373 927591 -65740414 - MIR SINE MIR -15 247 13 231 287 66 33 chr20 928103 928225 -65739780 + L2 LINE L2 3146 3271 -1 1915 116 3 89 chr20 928396 928723 -65739282 - AluJb SINE Alu -11 301 3 267 147 191 0 chr20 928754 928822 -65739183 - MER103 DNA DNA -85 81 1 277 196 22 141 chr20 929236 929277 -65738728 - MIR3 SINE MIR -24 184 157 2223 107 0 0 chr20 929277 929579 -65738426 - AluSx SINE Alu 0 302 1 277 196 22 141 chr20 929579 929628 -65738377 - MIR3 SINE MIR -51 157 104 504 236 19 9 chr20 929664 929770 -65738235 + MIR SINE MIR 39 145 -63 578 283 16 2 chr20 929977 930142 -65737863 - MIR SINE MIR -21 187 12 236 320 75 34 chr20 930468 930615 -65737390 + MIR SINE MIR 76 228 -34 22 35 0 0 chr20 931636 931665 -65736340 + GC_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr20 931767 931790 -65736215 + GC_rich Low_complexity Low_complexity 1 23 0 22 56 0 0 chr20 931800 931836 -65736169 + GC_rich Low_complexity Low_complexity 1 36 0 534 279 78 22 chr20 932635 932814 -65735191 - MIR SINE MIR -5 257 69 2463 96 0 3 chr20 932942 933255 -65734750 - AluSx SINE Alu 0 312 1 273 385 7 7 chr20 933467 933610 -65734395 - MIR3 SINE MIR -23 185 43 482 292 172 43 chr20 933617 934046 -65733959 + L2 LINE L2 2781 3272 0 441 274 280 26 chr20 934244 934670 -65733335 + L2 LINE L2 2787 3313 0 203 355 36 36 chr20 934684 934822 -65733183 + MIR3 SINE MIR 71 208 0 658 138 24 67 chr20 935201 935350 -65732655 - MLT1J2 LTR MaLR -311 139 14 214 256 198 0 chr20 935366 935452 -65732553 + L2 LINE L2 2589 2691 -623 278 157 20 0 chr20 935538 935589 -65732416 + MER81 DNA DNA 1 52 -62 4397 223 49 36 chr20 935614 935774 -65732231 - L1MD1 LINE L1 -122 6120 5964 1960 136 25 0 chr20 935774 936060 -65731945 - AluJb SINE Alu -19 293 1 4397 223 49 36 chr20 936060 937868 -65730137 - L1MD1 LINE L1 -278 5964 3639 1162 204 225 43 chr20 937847 937917 -65730088 + L1MDb LINE L1 732 788 -5621 * 2325 108 3 3 chr20 937917 938222 -65729783 + AluSx SINE Alu 1 305 -7 1162 204 225 43 chr20 938222 938591 -65729414 + L1MDb LINE L1 788 1251 -5158 713 228 35 93 chr20 938598 938888 -65729117 + LTR16C LTR ERVL 218 490 -1 1026 209 48 4 chr20 939563 939793 -65728212 + MIR SINE MIR 23 262 0 376 235 96 0 chr20 939985 940100 -65727905 - MIR3 SINE MIR -24 184 59 298 301 98 21 chr20 941206 941349 -65726656 + MIR SINE MIR 103 256 -6 982 254 98 0 chr20 941396 941632 -65726373 + MIR SINE MIR 4 262 0 743 280 177 24 chr20 941901 942319 -65725686 - L2 LINE L2 0 3313 2832 322 192 36 34 chr20 942663 942802 -65725203 - MIR SINE MIR -63 145 3 498 239 155 0 chr20 943151 943306 -65724699 + LTR16C LTR ERVL 149 327 -164 743 252 98 28 chr20 943677 943963 -65724042 + L2 LINE L2 2867 3172 -141 1705 126 0 8 chr20 944214 944496 -65723509 + AluSq SINE Alu 47 326 0 478 270 44 19 chr20 944624 944783 -65723222 - MLT1J LTR MaLR -348 163 1 220 244 0 0 chr20 945300 945357 -65722648 + MIR SINE MIR 97 143 -65 2195 144 0 0 chr20 945660 945973 -65722032 - AluSq SINE Alu 0 313 1 297 289 118 0 chr20 945977 946112 -65721893 + L2 LINE L2 2231 2381 -933 201 206 0 82 chr20 946162 946235 -65721770 + C-rich Low_complexity Low_complexity 3 69 0 658 209 58 62 chr20 946380 946605 -65721400 + LTR16C LTR ERVL 160 383 -108 383 267 17 17 chr20 946770 946886 -65721119 + L2 LINE L2 2934 3049 -223 249 227 83 83 chr20 946974 947106 -65720899 - L2 LINE L2 -1 3271 3140 656 224 75 0 chr20 947241 947402 -65720603 + MER58A DNA MER1_type 34 206 -18 603 133 11 51 chr20 947414 947550 -65720455 - MLT1F LTR MaLR -46 547 389 286 167 0 0 chr20 947525 947573 -65720432 - MLT1F LTR MaLR -293 249 202 * 570 298 81 10 chr20 947589 947787 -65720218 - MIR SINE MIR -48 214 3 243 282 51 54 chr20 948304 948439 -65719566 + MIR SINE MIR 20 154 -54 356 279 81 22 chr20 948659 948795 -65719210 - MIR SINE MIR -71 191 48 196 200 31 0 chr20 948851 948916 -65719089 + (TCCA)n Simple_repeat Simple_repeat 1 67 0 224 266 9 0 chr20 948954 949063 -65718942 + (TCCA)n Simple_repeat Simple_repeat 3 112 0 383 230 28 0 chr20 949115 949372 -65718633 + (TCCA)n Simple_repeat Simple_repeat 1 264 0 1013 280 134 27 chr20 949378 949867 -65718138 - L2 LINE L2 -3 3310 2755 340 251 102 58 chr20 950100 950295 -65717710 - MIR SINE MIR -49 213 13 228 340 87 13 chr20 950378 950528 -65717477 - MIR3 SINE MIR -20 188 28 528 263 40 17 chr20 951081 951282 -65716723 + MIR SINE MIR 41 252 -10 288 279 141 66 chr20 952010 952315 -65715690 + MLT1K LTR MaLR 261 588 0 327 362 14 14 chr20 952361 952502 -65715503 + MIR3 SINE MIR 5 145 -63 438 267 20 62 chr20 952885 952914 -65715091 + L1MC4a LINE L1 5178 5207 -939 1799 166 82 0 chr20 952914 953245 -65714760 - MER46B DNA MER2_type 0 236 4 438 267 20 62 chr20 953245 953410 -65714595 + L1MC4a LINE L1 5207 5364 -782 230 232 12 73 chr20 953411 953493 -65714512 + L1MC4a LINE L1 5456 5532 -589 551 305 30 30 chr20 953494 953694 -65714311 + L2 LINE L2 3114 3313 0 431 308 91 18 chr20 953745 954086 -65713919 + L1MC4a LINE L1 5564 5929 -1879 2111 105 4 4 chr20 954099 954427 -65713578 + AluSg SINE Alu 3 330 0 198 103 0 0 chr20 954453 954482 -65713523 + (TCCA)n Simple_repeat Simple_repeat 1 29 0 586 279 78 7 chr20 954621 954904 -65713101 - L1ME3A LINE L1 -12 6158 5856 1881 191 71 28 chr20 954970 955463 -65712542 - L1MC4 LINE L1 -285 7757 7244 6477 77 44 3 chr20 955485 955965 -65712040 - L1PA13 LINE L1 -11 6152 5693 2285 130 0 0 chr20 955965 956273 -65711732 - AluSx SINE Alu -4 308 1 6477 77 44 3 chr20 956273 956900 -65711105 - L1PA13 LINE L1 -470 5693 5024 451 280 25 65 chr20 958753 958953 -65709052 + MIR SINE MIR 48 239 -23 323 332 151 11 chr20 959057 959322 -65708683 + L2 LINE L2 2955 3256 -16 400 211 189 11 chr20 959518 959613 -65708392 - MER81 DNA DNA -2 112 1 227 295 21 53 chr20 959709 959746 -65708259 + LTR67 LTR ERVL 81 169 -385 328 146 0 0 chr20 959746 959801 -65708204 + MLT1J2 LTR MaLR 72 126 -324 * 739 238 155 0 chr20 959768 960020 -65707985 + MLT1L LTR MaLR 196 486 -129 2221 196 72 118 chr20 960028 960312 -65707693 + L1ME3 LINE L1 5142 5437 -725 2256 107 3 0 chr20 960312 960603 -65707402 + AluSp SINE Alu 3 294 -19 2221 196 72 118 chr20 960603 961389 -65706616 + L1ME3 LINE L1 5437 6160 -2 418 320 20 70 chr20 961568 961687 -65706318 - MIR SINE MIR -65 197 90 2222 111 10 0 chr20 961687 961985 -65706020 - AluSx SINE Alu -11 301 1 418 320 20 70 chr20 961985 962065 -65705940 - MIR SINE MIR -172 90 8 234 213 150 0 chr20 962263 962343 -65705662 + Charlie7 DNA MER1_type 14 105 -2507 * 252 216 32 48 chr20 962336 962461 -65705544 + Charlie7 DNA MER1_type 2440 2562 -50 878 203 6 0 chr20 962554 962712 -65705293 - FRAM SINE Alu -12 164 6 590 173 0 38 chr20 962753 962886 -65705119 + L1MA4 LINE L1 6173 6300 0 400 275 155 50 chr20 962925 963183 -65704822 - HAL1 LINE L1 -473 2034 1750 419 285 141 57 chr20 963269 963658 -65704347 + MLT1H LTR MaLR 118 539 -10 267 135 19 0 chr20 963663 963715 -65704290 - HAL1 LINE L1 -762 1745 1693 1468 246 127 14 chr20 963722 964211 -65703794 + MLT1H1 LTR MaLR 10 552 -3 293 232 143 63 chr20 964306 964543 -65703462 - HAL1 LINE L1 -1425 1082 827 263 344 99 18 chr20 964790 965011 -65702994 - HAL1 LINE L1 -2001 506 268 471 309 88 44 chr20 965598 965870 -65702135 + L2 LINE L2 2989 3272 0 528 254 148 0 chr20 967040 967209 -65700796 - MIR SINE MIR 0 262 69 436 256 17 26 chr20 967259 967376 -65700629 + L2 LINE L2 3197 3312 -1 635 203 105 7 chr20 967971 968124 -65699881 - MIR SINE MIR -10 252 85 274 244 146 12 chr20 968371 968453 -65699552 - MIR3 SINE MIR -10 198 106 235 247 173 80 chr20 968906 969068 -65698937 + L3 LINE CR1 996 1172 -405 1804 140 56 0 chr20 969242 969528 -65698477 + AluSx SINE Alu 1 302 -10 715 283 123 49 chr20 969529 970016 -65697989 + Charlie1b DNA MER1_type 1 523 0 249 380 10 0 chr20 970016 970116 -65697889 + L3 LINE CR1 1366 1466 -111 984 320 78 12 chr20 970205 970765 -65697240 + L2 LINE L2 2714 3312 -1 201 121 0 0 chr20 970775 970808 -65697197 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 407 283 108 0 chr20 971519 971639 -65696366 + L2 LINE L2 3180 3312 -1 649 239 78 58 chr20 971653 971858 -65696147 - MIR SINE MIR -50 212 4 370 245 129 52 chr20 971867 972022 -65695983 + MIR SINE MIR 70 236 -26 365 283 51 0 chr20 972339 972478 -65695527 - MIR SINE MIR -55 153 5 903 283 100 6 chr20 972676 973026 -65694979 - LTR16A LTR ERVL -8 442 60 404 239 127 14 chr20 973173 973315 -65694690 - MIR SINE MIR -62 200 43 231 309 84 46 chr20 973389 973651 -65694354 - L2 LINE L2 -86 3186 2915 425 254 179 17 chr20 974722 974895 -65693110 - MLT1K LTR MaLR -12 576 376 307 226 98 53 chr20 975112 975245 -65692760 - MIR SINE MIR -93 169 31 282 283 0 0 chr20 975384 975543 -65692462 + (TGGA)n Simple_repeat Simple_repeat 4 162 0 188 289 105 53 chr20 975998 976150 -65691855 - MIR3 SINE MIR -21 187 28 730 262 109 23 chr20 976327 976583 -65691422 - L2 LINE L2 -8 3305 3028 1066 226 131 27 chr20 976599 976957 -65691048 + MLT1J2 LTR MaLR 16 381 -69 737 291 216 12 chr20 976992 977404 -65690601 - L2 LINE L2 -343 2971 2476 1468 245 134 31 chr20 978074 978613 -65689392 + MLT1G1 LTR MaLR 1 594 -1 293 292 50 50 chr20 979027 979147 -65688858 - L2 LINE L2 -1 3312 3193 635 278 87 57 chr20 979147 979296 -65688709 + L2 LINE L2 2920 3063 -250 1893 145 10 3 chr20 979296 979599 -65688406 - AluSx SINE Alu -7 305 1 635 278 87 57 chr20 979599 979816 -65688189 + L2 LINE L2 3063 3297 -16 776 235 107 21 chr20 980324 980558 -65687447 + MIR SINE MIR 4 257 -5 892 186 27 27 chr20 980662 980845 -65687160 + L2 LINE L2 3127 3309 -4 26 30 0 0 chr20 981379 981412 -65686593 + AT_rich Low_complexity Low_complexity 1 33 0 544 289 57 0 chr20 981753 981912 -65686093 + MIR SINE MIR 20 187 -75 189 260 40 0 chr20 981929 981979 -65686026 - L2 LINE L2 -11 3261 3210 375 290 99 0 chr20 982705 982836 -65685169 - MIR SINE MIR -23 239 96 210 269 170 35 chr20 983031 983202 -65684803 + MIR SINE MIR 39 232 -30 1624 134 6 113 chr20 983202 983537 -65684468 + AluSx SINE Alu 2 300 -2 374 240 33 16 chr20 983661 983782 -65684223 + L1ME4a LINE L1 5960 6082 -39 1939 122 3 3 chr20 984056 984343 -65683662 - AluSx SINE Alu -25 287 1 285 246 52 44 chr20 984414 984536 -65683469 + MER5A DNA MER1_type 9 141 -48 196 313 0 45 chr20 984572 984639 -65683366 - MIR3 SINE MIR -43 165 102 217 284 25 12 chr20 984977 985058 -65682947 + MIR SINE MIR 111 192 -70 274 347 113 16 chr20 985268 985516 -65682489 + L2 LINE L2 2636 2907 -407 1643 170 87 32 chr20 986334 986704 -65681301 + MLT1B LTR MaLR 1 390 0 705 214 49 86 chr20 986730 986973 -65681032 - MER106A DNA MER1_type 0 236 3 470 281 87 56 chr20 986998 987216 -65680789 + MLT1L LTR MaLR 200 470 -145 1940 117 14 0 chr20 987216 987498 -65680507 - AluSq SINE Alu -27 286 1 470 281 87 56 chr20 987498 987645 -65680360 + MLT1L LTR MaLR 470 611 -4 453 275 155 40 chr20 987651 987902 -65680103 - MLT1K LTR MaLR -302 286 7 289 286 109 54 chr20 988107 988254 -65679751 - L2 LINE L2 0 3272 3118 764 299 48 81 chr20 988664 988855 -65679150 - LTR16A LTR ERVL 0 450 277 748 97 0 18 chr20 988855 988969 -65679036 + L1MA2 LINE L1 6193 6304 0 764 299 48 81 chr20 988969 989171 -65678834 - LTR16A LTR ERVL -173 277 70 325 299 37 0 chr20 989498 989605 -65678400 - MIR SINE MIR -3 259 149 579 232 222 40 chr20 990380 990722 -65677283 - MLT1H LTR MaLR -25 384 30 240 250 0 0 chr20 990896 990944 -65677061 + L2 LINE L2 2995 3042 -271 278 326 33 0 chr20 991033 991125 -65676880 + MIR SINE MIR 60 154 -108 454 189 189 8 chr20 991133 991265 -65676740 - MLT1L LTR MaLR -2 613 458 436 20 0 0 chr20 991318 991369 -65676636 + MADE1 DNA Mariner 2 52 -28 557 57 0 0 chr20 991372 991442 -65676563 + MADE1 DNA Mariner 7 76 -4 270 77 0 96 chr20 991422 991474 -65676531 + MADE1 DNA Mariner 32 78 -2 * 457 316 163 3 chr20 991978 992266 -65675739 + L2 LINE L2 1873 2206 -1108 * 1001 204 6 0 chr20 992264 992445 -65675560 - MER5A DNA MER1_type -6 183 2 * 1779 322 93 16 chr20 992445 992477 -65675528 + L2 LINE L2 2172 2200 -1113 728 225 23 17 chr20 992477 992650 -65675355 - MER5B DNA MER1_type -3 175 2 1779 322 93 16 chr20 992650 993674 -65674331 + L2 LINE L2 2200 3298 -15 212 313 0 0 chr20 993674 993722 -65674283 + polypurine Low_complexity Low_complexity 5 52 0 274 321 64 9 chr20 993890 993999 -65674006 + L2 LINE L2 3158 3272 0 327 233 381 0 chr20 994534 994723 -65673282 + L2 LINE L2 2905 3165 -148 21 95 0 0 chr20 994738 994801 -65673204 + AT_rich Low_complexity Low_complexity 1 63 0 2295 100 0 0 chr20 995060 995361 -65672644 - AluSc SINE Alu -8 301 1 1493 265 47 22 chr20 995444 996190 -65671815 - L1MEc LINE L1 -4714 1880 934 1540 271 149 17 chr20 996759 997402 -65670603 + L2 LINE L2 1252 1979 -1335 391 264 11 0 chr20 997404 997495 -65670510 + L2 LINE L2 2081 2172 -1142 969 181 65 138 chr20 997525 997895 -65670110 - MLT1A1 LTR MaLR -22 343 1 320 277 71 9 chr20 997899 998011 -65669994 + L2 LINE L2 2186 2304 -1010 513 296 90 17 chr20 998268 998612 -65669393 - L1ME LINE L1 -533 5629 5261 257 284 61 41 chr20 998729 998926 -65669079 - L1ME3A LINE L1 -5 6165 5965 2531 245 49 50 chr20 999010 999423 -65668582 - L1MC5 LINE L1 -429 7532 7120 1649 177 32 62 chr20 999423 999824 -65668181 + MLT1B LTR MaLR 1 389 -1 2531 245 49 50 chr20 999824 1000480 -65667525 - L1MC5 LINE L1 -841 7120 6471 229 278 67 100 chr20 1000716 1000883 -65667122 - HAL1b LINE L1 -690 658 487 2161 106 0 0 chr20 1000883 1001176 -65666829 + AluSx SINE Alu 1 293 -19 229 278 67 100 chr20 1001176 1001347 -65666658 - HAL1b LINE L1 -861 487 312 2257 89 3 0 chr20 1001347 1001651 -65666354 + AluSg SINE Alu 1 305 -5 229 278 67 100 chr20 1001651 1001923 -65666082 - HAL1b LINE L1 -1036 312 67 1316 178 50 23 chr20 1002406 1002665 -65665340 - MLT1C LTR MaLR -201 266 1 2091 136 120 26 chr20 1003010 1003250 -65664755 - MSTA LTR MaLR 0 428 135 2052 132 0 0 chr20 1003250 1003553 -65664452 + AluSx SINE Alu 1 303 -9 2091 136 120 26 chr20 1003553 1003703 -65664302 - MSTA LTR MaLR -293 135 1 229 263 32 0 chr20 1003998 1004093 -65663912 + MER113 DNA MER1_type? 39 136 -385 26 50 0 0 chr20 1004093 1004133 -65663872 + AT_rich Low_complexity Low_complexity 1 40 0 1216 263 22 19 chr20 1004487 1004644 -65663361 + MER113 DNA MER1_type? 156 311 -210 919 127 0 15 chr20 1004644 1004778 -65663227 + FLAM_C SINE Alu 1 132 -1 1216 263 22 19 chr20 1004778 1004985 -65663020 + MER113 DNA MER1_type? 311 521 0 351 204 57 34 chr20 1005065 1005153 -65662852 - MLT1H LTR MaLR -6 543 454 494 253 71 45 chr20 1005240 1005394 -65662611 - MLT1H LTR MaLR -226 323 166 266 213 82 16 chr20 1005408 1005469 -65662536 - MLT1H LTR MaLR -484 65 1 1968 122 3 7 chr20 1006017 1006312 -65661693 + AluSx SINE Alu 1 294 -18 1962 216 61 49 chr20 1006372 1007271 -65660734 - L1MDa LINE L1 -3413 3127 2205 249 260 52 10 chr20 1007271 1007367 -65660638 + MER69 DNA AcHobo 2412 2511 -15 1802 134 30 23 chr20 1007377 1007676 -65660329 + AluSx SINE Alu 3 303 -9 1851 114 0 0 chr20 1008157 1008411 -65659594 - AluSx SINE Alu -58 254 1 704 230 29 113 chr20 1008415 1008759 -65659246 + L2 LINE L2 2988 3302 -11 198 0 0 0 chr20 1008759 1008781 -65659224 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 798 264 55 78 chr20 1009403 1009664 -65658341 - MER102b DNA MER1_type -1102 326 72 2128 204 131 17 chr20 1009664 1010192 -65657813 - MLT1G LTR MaLR -2 588 1 798 264 55 78 chr20 1010192 1010237 -65657768 - MER102b DNA MER1_type -1356 72 27 1924 155 82 12 chr20 1010632 1010973 -65657032 + MLT1A1 LTR MaLR 1 365 0 272 271 113 40 chr20 1011120 1011271 -65656734 - MIR SINE MIR -71 191 30 191 305 126 46 chr20 1011289 1011463 -65656542 - L2 LINE L2 -421 2893 2706 339 293 91 47 chr20 1011823 1012076 -65655929 + MLT1K LTR MaLR 210 473 -115 196 225 7 176 chr20 1012167 1012219 -65655786 + MIR SINE MIR 102 117 -145 2153 122 0 0 chr20 1012219 1012523 -65655482 + AluSx SINE Alu 1 304 -8 196 225 7 176 chr20 1012523 1012612 -65655393 + MIR SINE MIR 117 219 -43 253 302 9 17 chr20 1012637 1012753 -65655252 + L1M4 LINE L1 4489 4603 -1543 1437 195 38 30 chr20 1012819 1013189 -65654816 + MER93b LTR ERV1 1 373 0 1054 259 58 31 chr20 1013222 1013574 -65654431 + MLT1I LTR MaLR 39 450 0 22 0 0 0 chr20 1013721 1013743 -65654262 + AT_rich Low_complexity Low_complexity 1 22 0 514 214 90 28 chr20 1013757 1013902 -65654103 - MER103 DNA DNA -12 154 1 340 265 49 123 chr20 1013995 1014199 -65653806 - MIR SINE MIR -58 204 16 555 250 8 17 chr20 1014528 1014648 -65653357 + MER5A DNA MER1_type 62 180 -9 373 288 43 18 chr20 1014648 1014811 -65653194 + MLT1L LTR MaLR 136 302 -313 402 298 171 22 chr20 1014840 1015156 -65652849 - MLT1J LTR MaLR -27 484 122 560 258 6 30 chr20 1015560 1015727 -65652278 + MIR SINE MIR 86 248 -14 252 59 0 0 chr20 1016432 1016466 -65651539 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 689 268 167 35 chr20 1016875 1017222 -65650783 - MLT1I LTR MaLR 0 409 17 219 289 0 67 chr20 1017244 1017334 -65650671 - L2 LINE L2 -289 2983 2900 422 315 219 0 chr20 1017379 1017525 -65650480 - MIR SINE MIR -83 179 2 511 296 160 45 chr20 1017616 1018065 -65649940 - Charlie8 DNA MER1_type -1891 526 26 2279 234 14 14 chr20 1018100 1018588 -65649417 + MLT1F LTR MaLR 1 488 -54 845 218 165 0 chr20 1018597 1018785 -65649220 - MER58A DNA MER1_type 0 224 6 211 260 41 14 chr20 1019480 1019553 -65648452 + GA-rich Low_complexity Low_complexity 1 75 0 278 297 93 25 chr20 1019743 1019861 -65648144 - MLT1K LTR MaLR -317 271 146 270 224 9 75 chr20 1019847 1019954 -65648051 - MLT1L LTR MaLR -402 213 114 * 405 293 118 54 chr20 1020358 1020672 -65647333 - L2 LINE L2 -94 3178 2845 2263 96 24 0 chr20 1020705 1020998 -65647007 - AluSg SINE Alu -10 300 1 422 224 179 60 chr20 1021296 1021497 -65646508 + L1ME LINE L1 5537 5761 -360 248 259 37 12 chr20 1021764 1021845 -65646160 - MLT1L LTR MaLR -25 590 508 325 229 14 0 chr20 1022012 1022082 -65645923 - MLT1J LTR MaLR -332 179 109 239 260 41 14 chr20 1022021 1022094 -65645911 - LTR67 LTR ERVL -382 175 101 * 3888 156 55 35 chr20 1022517 1022551 -65645454 - MER44D DNA MER2_type -1882 605 573 2431 97 0 0 chr20 1022551 1022859 -65645146 - AluSc SINE Alu -1 308 1 3888 156 55 35 chr20 1022859 1023517 -65644488 - MER44D DNA MER2_type -1914 573 27 327 235 0 0 chr20 1023525 1023623 -65644382 + (TA)n Simple_repeat Simple_repeat 1 98 0 22 0 0 0 chr20 1023785 1023807 -65644198 + AT_rich Low_complexity Low_complexity 1 22 0 247 182 73 0 chr20 1023845 1023900 -65644105 + Charlie8 DNA MER1_type 1367 1425 -992 331 263 46 66 chr20 1024589 1024741 -65643264 - MIR3 SINE MIR -29 179 31 201 343 0 57 chr20 1024853 1024923 -65643082 - MIR SINE MIR -111 97 32 192 292 104 0 chr20 1025063 1025159 -65642846 + MIR SINE MIR 87 192 -70 300 27 0 0 chr20 1025240 1025277 -65642728 + (TG)n Simple_repeat Simple_repeat 2 38 0 286 286 12 0 chr20 1025298 1025382 -65642623 + CT-rich Low_complexity Low_complexity 2 86 0 243 0 0 0 chr20 1025550 1025577 -65642428 + (A)n Simple_repeat Simple_repeat 1 27 0 2839 257 68 11 chr20 1025919 1027054 -65640951 - L1ME3A LINE L1 -9 6659 5458 1482 178 39 70 chr20 1027057 1027412 -65640593 - MLT1A2 LTR MaLR 0 374 31 634 274 118 18 chr20 1027460 1027833 -65640172 - L1ME3A LINE L1 -1181 5463 5073 4851 171 50 54 chr20 1028391 1028514 -65639491 - L1MB7 LINE L1 -19 6165 6043 1433 113 19 0 chr20 1028514 1028726 -65639279 + L1MC1 LINE L1 6118 6333 0 4851 171 50 54 chr20 1028726 1029489 -65638516 - L1MB7 LINE L1 -141 6043 5278 2007 91 0 36 chr20 1029489 1029765 -65638240 - AluSq SINE Alu -7 306 41 4851 171 50 54 chr20 1029765 1030166 -65637839 - L1MB7 LINE L1 -906 5278 4877 2289 118 0 10 chr20 1030166 1030479 -65637526 + AluSg SINE Alu 1 310 0 4851 171 50 54 chr20 1030479 1031226 -65636779 - L1MB7 LINE L1 -1307 4877 4139 6152 193 62 86 chr20 1031271 1032378 -65635627 - L1ME3A LINE L1 -4456 2188 1136 1779 148 22 11 chr20 1032378 1032656 -65635349 - AluJo SINE Alu -13 299 19 6152 193 62 86 chr20 1032656 1033766 -65634239 - L1ME3A LINE L1 -5508 1136 1 832 162 42 63 chr20 1033767 1033958 -65634047 - MIR SINE MIR -43 219 33 431 261 51 14 chr20 1034005 1034143 -65633862 + MIR3 SINE MIR 24 166 -42 625 191 194 12 chr20 1034621 1034923 -65633082 + L2 LINE L2 2780 3132 -181 201 231 66 33 chr20 1035845 1035936 -65632069 - MIR SINE MIR -41 221 128 929 143 102 168 chr20 1035996 1036408 -65631597 + LTR37A LTR ERV1 42 426 0 300 259 0 25 chr20 1036529 1036610 -65631395 - MIR SINE MIR -60 148 81 222 37 0 0 chr20 1036621 1036648 -65631357 + (TG)n Simple_repeat Simple_repeat 2 28 0 378 209 0 23 chr20 1036913 1036999 -65631006 - MIR SINE MIR -156 106 23 311 234 298 13 chr20 1037012 1037170 -65630835 + MIR SINE MIR 47 249 -13 186 225 0 0 chr20 1037138 1037178 -65630827 + L2 LINE L2 3263 3302 -11 * 389 283 129 39 chr20 1037201 1037434 -65630571 - MIR SINE MIR 0 262 9 643 181 0 24 chr20 1037446 1037573 -65630432 - L2 LINE L2 0 3313 3190 447 269 148 0 chr20 1038304 1038453 -65629552 + MIR SINE MIR 42 212 -50 1526 228 73 3 chr20 1038896 1039277 -65628728 + L1ME1 LINE L1 5506 5913 -251 252 185 19 19 chr20 1039628 1039682 -65628323 + LTR16A LTR ERVL 381 434 -16 906 203 41 78 chr20 1039683 1039776 -65628229 + L1ME1 LINE L1 5903 5998 -168 2269 155 75 10 chr20 1039776 1040176 -65627829 + MSTB LTR MaLR 1 426 0 906 203 41 78 chr20 1040176 1040353 -65627652 + L1ME1 LINE L1 5998 6163 -3 348 213 38 0 chr20 1040398 1040478 -65627527 + L1ME1 LINE L1 6068 6150 -16 2376 96 0 0 chr20 1040484 1040775 -65627230 + AluSx SINE Alu 1 291 -21 405 195 34 34 chr20 1040778 1040896 -65627109 + MER97a DNA MER1_type? 746 863 -31 3361 189 16 0 chr20 1040907 1041631 -65626374 + L1M3 LINE L1 4717 5448 -732 850 133 8 16 chr20 1041632 1041760 -65626245 + FLAM_C SINE Alu 1 127 -16 879 115 21 103 chr20 1041762 1041925 -65626080 + L1MC/D LINE L1 5440 5575 -596 411 200 12 0 chr20 1041925 1042003 -65626002 + L1MB4 LINE L1 6095 6180 0 879 115 21 103 chr20 1042003 1042029 -65625976 + L1MC/D LINE L1 5575 5602 -569 2279 88 20 3 chr20 1042038 1042333 -65625672 - AluY SINE Alu -11 300 1 252 139 0 0 chr20 1042365 1042401 -65625604 + MER97a DNA MER1_type? 857 892 -2 195 163 0 47 chr20 1042469 1042512 -65625493 - L2 LINE L2 -217 3055 3015 432 0 0 0 chr20 1042856 1042904 -65625101 + (CA)n Simple_repeat Simple_repeat 2 49 0 201 262 0 82 chr20 1042956 1043017 -65624988 - L2 LINE L2 -80 3192 3137 2619 45 3 6 chr20 1043090 1043401 -65624604 - AluY SINE Alu -1 310 1 1002 218 37 25 chr20 1043595 1043838 -65624167 + LTR16C LTR ERVL 246 491 0 720 247 11 11 chr20 1044748 1044926 -65623079 + MER97c DNA MER1_type? 1 178 -912 206 179 0 0 chr20 1045094 1045133 -65622872 + L2 LINE L2 2932 2970 -302 2430 75 7 0 chr20 1045148 1045441 -65622564 - AluSg SINE Alu -15 295 1 211 368 52 15 chr20 1045748 1045884 -65622121 + MER5A DNA MER1_type 1 141 -48 591 240 106 56 chr20 1046051 1046372 -65621633 - L2 LINE L2 -56 3257 2921 768 254 5 0 chr20 1046377 1046562 -65621443 - L2 LINE L2 -667 2647 2462 534 276 109 26 chr20 1046586 1046739 -65621266 - L2 LINE L2 -423 2891 2752 2341 102 0 19 chr20 1046739 1047054 -65620951 - AluSx SINE Alu -3 309 1 534 276 109 26 chr20 1047054 1047211 -65620794 - L2 LINE L2 -562 2752 2555 485 243 122 6 chr20 1047329 1047505 -65620500 + MIR SINE MIR 58 252 -10 678 204 43 66 chr20 1047511 1047722 -65620283 + MIR SINE MIR 35 240 -22 22 35 0 0 chr20 1050529 1050558 -65617447 + AT_rich Low_complexity Low_complexity 1 29 0 257 257 37 37 chr20 1051581 1051690 -65616315 + MIR SINE MIR 27 135 -73 2019 127 10 16 chr20 1051696 1052010 -65615995 - AluSx SINE Alu 0 312 1 369 296 203 27 chr20 1052975 1053414 -65614591 - L1MC4a LINE L1 -1976 5832 5317 260 237 79 0 chr20 1053494 1053570 -65614435 - L1MC4a LINE L1 -915 5231 5150 851 270 167 16 chr20 1053794 1054224 -65613781 + L1ME3A LINE L1 5446 5940 -230 480 260 107 17 chr20 1054702 1054879 -65613126 + MIR3 SINE MIR 14 206 -2 316 326 136 13 chr20 1055084 1055320 -65612685 + L1ME LINE L1 5532 5796 -325 260 310 72 46 chr20 1055346 1055708 -65612297 + L2 LINE L2 2875 3239 -74 254 305 73 40 chr20 1055738 1055915 -65612090 - L1MC4a LINE L1 -1889 5919 5737 563 275 138 53 chr20 1055918 1056005 -65612000 - LTR67 LTR ERVL -1 556 478 1989 127 0 14 chr20 1056005 1056308 -65611697 + AluSx SINE Alu 3 301 0 563 275 138 53 chr20 1056308 1056691 -65611314 - LTR67 LTR ERVL -79 478 45 1894 176 73 38 chr20 1057255 1057681 -65610324 - L1MC1 LINE L1 -2 6331 5891 1084 278 79 31 chr20 1057662 1058119 -65609886 - L1MC4a LINE L1 -1155 6653 6175 * 1291 126 229 42 chr20 1058130 1058285 -65609720 - AluSx SINE Alu -1 311 186 2464 56 7 20 chr20 1058285 1058589 -65609416 - AluY SINE Alu -11 300 1 1291 126 229 42 chr20 1058589 1058695 -65609310 - AluSx SINE Alu -126 186 1 350 303 148 38 chr20 1058947 1059043 -65608962 + L2 LINE L2 2654 2738 -534 4105 130 50 14 chr20 1059043 1059757 -65608248 + L1MB3 LINE L1 5441 6180 -3 350 303 148 38 chr20 1059757 1060019 -65607986 + L2 LINE L2 2738 3063 -209 977 151 18 87 chr20 1060048 1060266 -65607739 - AluJo SINE Alu -21 291 89 276 217 122 26 chr20 1060783 1060898 -65607107 + MIR SINE MIR 123 248 -14 6278 224 69 45 chr20 1061387 1061666 -65606339 - L1MC4a LINE L1 -1199 4947 4676 2232 110 0 31 chr20 1061666 1061985 -65606020 - AluSc SINE Alu 0 309 1 6278 224 69 45 chr20 1061985 1062956 -65605049 - L1MC4a LINE L1 -1470 4676 3730 183 80 0 0 chr20 1062956 1062981 -65605024 + (TA)n Simple_repeat Simple_repeat 2 26 0 6278 224 69 45 chr20 1062981 1063909 -65604096 - L1MC4a LINE L1 -2416 3730 2716 230 263 11 53 chr20 1065656 1065751 -65602254 - MIR SINE MIR -95 113 23 2098 253 71 25 chr20 1065861 1066607 -65601398 - MER20B DNA MER1_type -1 783 4 308 259 3 3 chr20 1066649 1066753 -65601252 + L1MC5 LINE L1 7061 7228 -644 1183 233 67 67 chr20 1066885 1067469 -65600536 + L1MC5 LINE L1 7331 7914 -47 1383 215 43 7 chr20 1067484 1067786 -65600219 + L1MB8 LINE L1 3570 3882 -2264 1022 118 31 12 chr20 1067786 1067947 -65600058 + AluSg/x SINE Alu 135 298 -12 345 259 47 0 chr20 1067950 1068035 -65599970 + L1MB8 LINE L1 3873 3961 -2185 1305 186 0 5 chr20 1068038 1068259 -65599746 + AluJb SINE Alu 87 306 -6 2064 120 18 0 chr20 1068304 1068587 -65599418 + AluSx SINE Alu 1 288 -24 4909 209 45 45 chr20 1068610 1068958 -65599047 + L1MB8 LINE L1 3960 4307 -1867 1833 73 0 0 chr20 1068958 1069177 -65598828 + AluY SINE Alu 85 303 -8 4909 209 45 45 chr20 1069177 1070305 -65597700 + L1MB8 LINE L1 4307 5434 -740 1849 165 75 29 chr20 1070308 1070762 -65597243 + L1MB8 LINE L1 5703 6177 -1 3867 209 54 33 chr20 1071001 1071347 -65596658 + L1MD1 LINE L1 4050 4387 -1855 2206 73 3 31 chr20 1071347 1071635 -65596370 + AluSx SINE Alu 1 280 -32 180 0 0 0 chr20 1071636 1071656 -65596349 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 3867 209 54 33 chr20 1071656 1071680 -65596325 + L1MD1 LINE L1 4387 4409 -1833 5749 30 0 0 chr20 1071680 1072339 -65595666 - L1PA4 LINE L1 0 6155 5497 3867 209 54 33 chr20 1072339 1073219 -65594786 + L1MD1 LINE L1 4409 5361 -881 2149 111 10 13 chr20 1073219 1073525 -65594480 + AluSx SINE Alu 1 305 -7 3867 209 54 33 chr20 1073525 1074240 -65593765 + L1MD1 LINE L1 5361 6059 -183 236 193 44 114 chr20 1074243 1074310 -65593695 + L1MD2 LINE L1 6251 6308 -51 1901 148 39 0 chr20 1074310 1074594 -65593411 - AluSq SINE Alu -16 297 3 236 193 44 114 chr20 1074594 1074640 -65593365 + L1MD2 LINE L1 6308 6356 -3 252 341 64 58 chr20 1074789 1074962 -65593043 - L2 LINE L2 -174 3098 2925 370 308 109 0 chr20 1076090 1076246 -65591759 + MIR SINE MIR 18 190 -72 393 22 0 0 chr20 1076546 1076592 -65591413 + (CAT)n Simple_repeat Simple_repeat 2 47 0 336 340 37 37 chr20 1076660 1076848 -65591157 - MIR SINE MIR -62 200 13 302 331 157 12 chr20 1078039 1078211 -65589794 - L1ME LINE L1 -294 5827 5631 3056 143 67 24 chr20 1078215 1078885 -65589120 - Charlie1a DNA MER1_type -8 1447 749 1095 190 55 51 chr20 1078888 1079162 -65588843 - Charlie1a DNA MER1_type -809 646 372 1703 188 40 0 chr20 1079164 1079441 -65588564 + AluJb SINE Alu 1 288 -24 1151 158 0 0 chr20 1079441 1079606 -65588399 + AluJb SINE Alu 134 298 -14 1197 217 84 10 chr20 1079606 1079905 -65588100 - Charlie1a DNA MER1_type -1073 382 62 1180 248 55 37 chr20 1079948 1080436 -65587569 - L1ME LINE L1 -766 5380 4884 432 254 87 76 chr20 1080572 1080757 -65587248 - MIR SINE MIR -10 252 66 552 307 78 10 chr20 1080766 1080974 -65587031 - MIR SINE MIR -1 261 41 507 306 48 34 chr20 1081538 1081744 -65586261 - MIR SINE MIR -4 258 50 699 294 81 20 chr20 1081958 1082254 -65585751 - L2 LINE L2 -556 2758 2445 479 306 60 28 chr20 1082255 1082503 -65585502 - L1ME LINE L1 -376 5745 5490 559 251 147 20 chr20 1082628 1082961 -65585044 - MLT1E3 LTR MaLR -26 479 139 369 232 86 78 chr20 1083080 1083311 -65584694 - MLT1E3-int LTR MaLR -30 1705 1107 454 266 175 7 chr20 1084020 1084163 -65583842 + MER5A DNA MER1_type 22 188 -1 2703 238 102 26 chr20 1085108 1086310 -65581695 + L1ME LINE L1 396 1687 -4393 3043 78 34 25 chr20 1086311 1086749 -65581256 - MLT2A1 LTR ERVL -2 442 1 6589 48 12 11 chr20 1086750 1087605 -65580400 - HERVL-A1 LTR ERVL -1 5653 4798 202 211 0 0 chr20 1087649 1087687 -65580318 + L2 LINE L2 3216 3253 -19 1420 113 0 0 chr20 1088309 1088494 -65579511 + AluSg/x SINE Alu 123 307 -3 24 0 0 0 chr20 1088600 1088624 -65579381 + AT_rich Low_complexity Low_complexity 1 24 0 1089 201 72 5 chr20 1088664 1088873 -65579132 - AluJo SINE Alu -89 223 1 266 145 24 145 chr20 1089676 1089759 -65578246 - L1ME LINE L1 -244 5877 5805 24 32 0 0 chr20 1089837 1089868 -65578137 + AT_rich Low_complexity Low_complexity 1 31 0 548 271 8 0 chr20 1091950 1092083 -65575922 + MER106A DNA MER1_type 29 162 -74 33 25 0 0 chr20 1092290 1092330 -65575675 + AT_rich Low_complexity Low_complexity 1 40 0 183 243 0 0 chr20 1093924 1093961 -65574044 - L2 LINE L2 -716 2598 2562 426 310 120 0 chr20 1094164 1094322 -65573683 - MIR SINE MIR -68 194 18 337 336 60 0 chr20 1095255 1095404 -65572601 + MIR3 SINE MIR 42 199 -9 211 342 34 43 chr20 1095689 1095806 -65572199 + MIR3 SINE MIR 15 130 -78 3335 159 70 32 chr20 1096744 1097484 -65570521 - L1MB7 LINE L1 0 6184 5417 209 268 141 78 chr20 1099368 1099510 -65568495 + MER5A DNA MER1_type 34 184 -5 532 169 208 8 chr20 1099551 1099681 -65568324 + MER5A DNA MER1_type 28 183 -6 181 259 74 19 chr20 1099651 1099705 -65568300 - L2 LINE L2 -2075 1239 1183 * 246 301 97 29 chr20 1099904 1100007 -65567998 - MIR SINE MIR -72 190 81 184 94 0 31 chr20 1100380 1100412 -65567593 - MIR SINE MIR -189 73 43 264 261 84 24 chr20 1100803 1100944 -65567061 - MIR3 SINE MIR -47 161 47 235 192 270 11 chr20 1101376 1101473 -65566532 + MIR SINE MIR 85 199 -9 761 257 16 5 chr20 1101662 1101849 -65566156 + MIR SINE MIR 53 241 -21 676 162 34 0 chr20 1102178 1102295 -65565710 - AluJo/FRAM SINE Alu -1 311 191 695 202 0 0 chr20 1102296 1102410 -65565595 - FLAM_A SINE Alu -19 114 1 201 39 0 0 chr20 1102447 1102473 -65565532 + (GTTTG)n Simple_repeat Simple_repeat 1 26 0 270 138 292 0 chr20 1102939 1103004 -65565001 + L2 LINE L2 3230 3313 0 480 251 133 5 chr20 1103229 1103424 -65564581 + MER102b DNA MER1_type 122 341 0 334 254 183 24 chr20 1104000 1104126 -65563879 - MIR SINE MIR -1 261 116 230 227 0 15 chr20 1104172 1104238 -65563767 + C-rich Low_complexity Low_complexity 5 69 0 619 254 57 17 chr20 1104599 1104776 -65563229 - MIR SINE MIR -3 259 76 211 260 237 45 chr20 1105122 1105299 -65562706 - L3 LINE CR1 -20 1557 1347 281 256 73 0 chr20 1105571 1105653 -65562352 - MIR SINE MIR -91 117 30 206 349 0 0 chr20 1105939 1106002 -65562003 + (TG)n Simple_repeat Simple_repeat 2 64 0 1512 291 76 17 chr20 1106566 1107080 -65560925 - L2 LINE L2 0 3313 2725 469 277 136 0 chr20 1107080 1107235 -65560770 - MER69A DNA AcHobo -1 176 1 1512 291 76 17 chr20 1107235 1107586 -65560419 - L2 LINE L2 -588 2725 2396 686 220 38 25 chr20 1107638 1107797 -65560208 - MIR SINE MIR -76 186 26 339 213 27 0 chr20 1109651 1109726 -65558279 - MIR3 SINE MIR -23 185 109 415 301 68 17 chr20 1111175 1111351 -65556654 + MIR SINE MIR 55 239 -23 577 236 93 25 chr20 1111397 1111558 -65556447 + MIR SINE MIR 51 222 -40 490 254 75 79 chr20 1112186 1112465 -65555540 + MER102b DNA MER1_type 13 290 -51 372 22 0 0 chr20 1112702 1112747 -65555258 + (TG)n Simple_repeat Simple_repeat 2 46 0 185 0 0 39 chr20 1112770 1112796 -65555209 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 363 96 0 0 chr20 1114016 1114068 -65553937 + (CA)n Simple_repeat Simple_repeat 1 52 0 23 0 0 0 chr20 1114591 1114614 -65553391 + GC_rich Low_complexity Low_complexity 1 23 0 247 218 0 39 chr20 1114827 1114905 -65553100 + G-rich Low_complexity Low_complexity 5 79 0 21 36 0 0 chr20 1115105 1115133 -65552872 + GC_rich Low_complexity Low_complexity 1 28 0 207 135 39 58 chr20 1115193 1115245 -65552760 + C-rich Low_complexity Low_complexity 3 53 0 241 284 37 102 chr20 1115461 1115676 -65552329 + L2 LINE L2 2987 3187 -85 265 319 0 0 chr20 1115748 1115820 -65552185 + MER96 DNA MER1_type? 1 72 -103 324 287 166 0 chr20 1116267 1116424 -65551581 + MIR SINE MIR 31 213 -49 * 1238 257 81 28 chr20 1116420 1116817 -65551188 + L2 LINE L2 2891 3308 -5 614 346 42 34 chr20 1116841 1117334 -65550671 - L2 LINE L2 -67 3205 2714 3778 184 47 49 chr20 1117445 1117567 -65550438 + L1MC3 LINE L1 6496 6617 -1168 252 0 0 0 chr20 1117567 1117595 -65550410 + (CA)n Simple_repeat Simple_repeat 2 29 0 3778 184 47 49 chr20 1117595 1118907 -65549098 + L1MC3 LINE L1 6617 7704 -81 2055 159 20 30 chr20 1118907 1119310 -65548695 + MSTB LTR MaLR 1 399 -27 1164 111 0 0 chr20 1119321 1119376 -65548629 + (TTC)n Simple_repeat Simple_repeat 1 235 0 1164 111 0 0 chr20 1119376 1119556 -65548449 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1698 183 10 10 chr20 1119619 1119914 -65548091 - AluJo SINE Alu -17 295 1 254 105 0 0 chr20 1119915 1119953 -65548052 + MSTB LTR MaLR 395 432 0 409 111 0 0 chr20 1119955 1120018 -65547987 + L1MC3 LINE L1 7702 7764 -21 200 358 98 24 chr20 1120432 1120555 -65547450 - L2 LINE L2 -572 2742 2611 893 245 176 31 chr20 1120729 1121233 -65546772 - MLT1G LTR MaLR 0 590 13 2475 60 0 7 chr20 1121353 1121652 -65546353 + AluY SINE Alu 1 297 -14 1561 259 63 11 chr20 1121742 1122205 -65545800 + MLT1J LTR MaLR 7 493 -18 2376 107 0 0 chr20 1122227 1122536 -65545469 + AluSq SINE Alu 1 309 -4 634 238 94 30 chr20 1122816 1123051 -65544954 - MIR SINE MIR -5 257 8 1191 220 91 49 chr20 1124297 1124359 -65543646 - MLT1A1 LTR MaLR 0 365 307 1671 194 17 3 chr20 1124359 1124658 -65543347 + AluJo SINE Alu 1 303 -9 1191 220 91 49 chr20 1124658 1124945 -65543060 - MLT1A1 LTR MaLR -58 307 1 899 268 197 29 chr20 1124958 1125369 -65542636 - LTR16C LTR ERVL -9 482 3 1101 227 196 44 chr20 1126093 1126502 -65541503 - MLT1J LTR MaLR -40 471 1 42 47 0 24 chr20 1126525 1126566 -65541439 + AT_rich Low_complexity Low_complexity 1 41 -42 1853 153 43 0 chr20 1126566 1126848 -65541157 - AluSx SINE Alu -18 294 1 42 47 0 24 chr20 1126848 1126891 -65541114 + AT_rich Low_complexity Low_complexity 41 83 0 181 128 43 0 chr20 1126907 1126954 -65541051 + (TA)n Simple_repeat Simple_repeat 2 50 0 326 252 36 18 chr20 1127588 1127699 -65540306 + MIR SINE MIR 49 161 -101 544 191 63 32 chr20 1127748 1127874 -65540131 - MER119 DNA MER1_type 0 583 454 495 278 63 0 chr20 1127874 1128000 -65540005 - MER119 DNA MER1_type -449 134 1 220 283 43 0 chr20 1128000 1128092 -65539913 + MIR SINE MIR 164 259 -3 604 247 66 52 chr20 1128367 1128658 -65539347 + MLT1H LTR MaLR 64 376 -33 314 173 49 12 chr20 1129130 1129211 -65538794 - MIR SINE MIR -89 119 36 2017 191 13 64 chr20 1129500 1129970 -65538035 - MER41B LTR ERV1 -33 602 157 2330 122 0 0 chr20 1130183 1130486 -65537519 + AluSq SINE Alu 1 303 -10 1678 148 0 19 chr20 1130558 1130821 -65537184 - AluJo SINE Alu -54 258 1 415 269 97 7 chr20 1130875 1131020 -65536985 - L1MEd LINE L1 -5365 754 597 26 23 0 23 chr20 1131089 1131112 -65536893 + AT_rich Low_complexity Low_complexity 1 24 -19 1897 88 0 4 chr20 1131112 1131352 -65536653 - AluSq SINE Alu -74 239 1 26 23 0 23 chr20 1131352 1131372 -65536633 + AT_rich Low_complexity Low_complexity 24 43 0 484 261 39 20 chr20 1131412 1131565 -65536440 + L2 LINE L2 3158 3313 0 4194 90 15 0 chr20 1131591 1132137 -65535868 + MER41A LTR ERV1 1 554 0 384 251 64 98 chr20 1132261 1132496 -65535509 - MLT1L LTR MaLR -200 415 189 466 260 27 7 chr20 1133330 1133476 -65534529 + MIR SINE MIR 81 229 -33 264 239 14 14 chr20 1133527 1133598 -65534407 - LTR16C LTR ERVL 0 491 421 2338 98 0 7 chr20 1134513 1134819 -65533186 - AluSx SINE Alu -8 304 1 1573 149 38 8 chr20 1135227 1135510 -65532495 + AluJo SINE Alu 36 312 0 2509 173 17 4 chr20 1135585 1136058 -65531947 - Charlie1b DNA MER1_type 0 523 45 210 329 40 0 chr20 1136069 1136145 -65531860 - MIR SINE MIR -68 194 116 286 318 9 0 chr20 1136594 1136701 -65531304 + MIR SINE MIR 30 137 -71 336 256 107 135 chr20 1136994 1137462 -65530543 + MLT1K LTR MaLR 132 586 -2 2080 207 154 24 chr20 1137871 1138532 -65529473 + LTR50 LTR ERVL 49 795 0 357 223 83 68 chr20 1139384 1139673 -65528332 - MLT1F1 LTR MaLR -13 554 185 243 266 0 16 chr20 1139851 1139915 -65528090 + CT-rich Low_complexity Low_complexity 3 65 0 192 97 0 0 chr20 1139915 1139946 -65528059 + (CAT)n Simple_repeat Simple_repeat 3 33 0 801 264 81 4 chr20 1139947 1140182 -65527823 + MIR SINE MIR 10 262 0 3299 93 2 23 chr20 1140202 1140685 -65527320 - L1PA8 LINE L1 -4 6168 5696 2307 89 3 0 chr20 1140691 1140984 -65527021 - AluSp SINE Alu -19 294 1 952 241 31 0 chr20 1141005 1141233 -65526772 + MIR SINE MIR 2 236 -26 338 355 44 15 chr20 1141303 1141506 -65526499 - MIR SINE MIR -52 210 2 1128 191 131 72 chr20 1141823 1142178 -65525827 - MLT1D LTR MaLR -106 399 34 190 265 174 15 chr20 1142643 1142775 -65525230 + MIR SINE MIR 32 184 -78 418 303 8 8 chr20 1142854 1142973 -65525032 - L2 LINE L2 -4 3309 3191 2503 210 121 21 chr20 1143107 1143793 -65524212 - MER69 DNA AcHobo -2 2524 1757 3008 162 19 47 chr20 1143793 1144366 -65523639 - MER41D LTR ERV1 0 557 1 2503 210 121 21 chr20 1144366 1144423 -65523582 - MER69 DNA AcHobo -769 1757 1707 * 3331 249 66 16 chr20 1144419 1145284 -65522721 - MER69 DNA AcHobo -1614 912 5 190 288 63 54 chr20 1145289 1145400 -65522605 - L2 LINE L2 -469 2845 2734 1562 191 41 61 chr20 1145417 1146181 -65521824 + LTR13 LTR ERVK 1 800 -207 42006 62 9 6 chr20 1146186 1150755 -65517250 + L1PA5 LINE L1 4 4558 -1596 983 59 46 0 chr20 1150755 1150908 -65517097 + CT-rich Low_complexity Low_complexity 2 161 0 2400 68 0 0 chr20 1150908 1151187 -65516818 - AluY SINE Alu -32 279 1 42006 62 9 6 chr20 1151187 1152616 -65515389 + L1PA5 LINE L1 4558 6025 -129 2274 81 0 17 chr20 1152616 1152913 -65515092 + AluSp SINE Alu 1 292 -21 42006 62 9 6 chr20 1152913 1153043 -65514962 + L1PA5 LINE L1 6025 6153 -1 1401 124 13 13 chr20 1153043 1153269 -65514736 + LTR13 LTR ERVK 782 1007 0 2173 99 7 0 chr20 1153293 1153577 -65514428 - AluSx SINE Alu -26 286 1 499 128 0 26 chr20 1153620 1153698 -65514307 - MER1B DNA MER1_type 0 329 254 1141 117 6 0 chr20 1153699 1153870 -65514135 - MER1B DNA MER1_type -75 222 51 339 257 89 14 chr20 1153890 1154104 -65513901 - L2 LINE L2 -634 2680 2451 291 303 62 51 chr20 1154154 1154332 -65513673 + MIR SINE MIR 35 214 -48 186 43 0 0 chr20 1154560 1154583 -65513422 + (TAA)n Simple_repeat Simple_repeat 1 23 0 458 285 86 5 chr20 1154584 1154770 -65513235 - MIR SINE MIR -8 254 54 180 0 0 0 chr20 1155051 1155071 -65512934 + (CCG)n Simple_repeat Simple_repeat 3 22 0 368 224 14 41 chr20 1155092 1155239 -65512766 + (CCCCG)n Simple_repeat Simple_repeat 2 144 0 344 136 6 62 chr20 1155264 1155441 -65512564 + (CCCCG)n Simple_repeat Simple_repeat 5 171 0 234 252 0 73 chr20 1155940 1156063 -65511942 + (CCCCG)n Simple_repeat Simple_repeat 5 118 0 2158 93 0 3 chr20 1156332 1156622 -65511383 - AluSx SINE Alu -23 289 1 317 279 23 0 chr20 1158507 1158593 -65509412 - MIR SINE MIR -17 245 158 430 250 192 0 chr20 1158659 1158815 -65509190 + MIR SINE MIR 64 249 -13 1055 68 0 0 chr20 1158819 1158951 -65509054 + AluSg/x SINE Alu 176 307 -5 187 291 244 0 chr20 1158972 1159058 -65508947 - MIR SINE MIR -136 126 20 268 307 24 24 chr20 1159984 1160111 -65507894 + L2 LINE L2 3179 3305 -8 843 318 110 15 chr20 1160225 1160862 -65507143 - L2 LINE L2 -8 3305 2599 2185 253 114 39 chr20 1161244 1162133 -65505872 - L2 LINE L2 0 3313 2493 1621 141 14 186 chr20 1162133 1162574 -65505431 + MLT1A1 LTR MaLR 1 365 0 2185 253 114 39 chr20 1162574 1162891 -65505114 - L2 LINE L2 -820 2493 2201 2114 163 14 17 chr20 1162891 1163253 -65504752 - MLT1A1 LTR MaLR -4 361 1 2185 253 114 39 chr20 1163253 1163345 -65504660 - L2 LINE L2 -1112 2201 1899 257 238 111 63 chr20 1163805 1163931 -65504074 - L2 LINE L2 -13 3300 3169 1715 145 40 27 chr20 1164157 1164454 -65503551 - AluJo SINE Alu -11 301 1 798 174 192 25 chr20 1164775 1165051 -65502954 - MER5C DNA MER1_type -2 322 1 2196 122 0 0 chr20 1165184 1165479 -65502526 - AluSx SINE Alu -17 295 1 198 0 0 0 chr20 1165527 1165549 -65502456 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 421 265 45 8 chr20 1165975 1166107 -65501898 + MIR SINE MIR 40 176 -86 568 247 6 25 chr20 1166701 1166863 -65501142 + MIR SINE MIR 2 160 -102 273 254 21 113 chr20 1167284 1167426 -65500579 + MIR3 SINE MIR 77 205 -3 30 0 0 0 chr20 1168000 1168030 -65499975 + AT_rich Low_complexity Low_complexity 1 30 0 2052 125 0 10 chr20 1168230 1168538 -65499467 - AluSx SINE Alu 0 305 1 1790 185 81 49 chr20 1170012 1170482 -65497523 + MER66B LTR ERV1 1 485 -1 1862 174 0 0 chr20 1171646 1171944 -65496061 - AluJb SINE Alu -14 298 1 212 0 36 0 chr20 1172298 1172326 -65495679 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 28 61 0 0 chr20 1174048 1174097 -65493908 + AT_rich Low_complexity Low_complexity 1 49 0 213 39 0 0 chr20 1177457 1177483 -65490522 + (A)n Simple_repeat Simple_repeat 1 26 0 611 290 58 33 chr20 1178455 1178731 -65489274 - HAL1 LINE L1 0 2507 2225 641 169 136 32 chr20 1178777 1178931 -65489074 - MLT1J LTR MaLR 0 511 342 692 226 167 0 chr20 1178988 1179174 -65488831 - MLT1J LTR MaLR -294 217 1 3267 36 0 0 chr20 1179267 1179652 -65488353 - L1PA5 LINE L1 0 6154 5770 3573 37 103 0 chr20 1179665 1180121 -65487884 - L1PA5 LINE L1 0 6154 5652 1217 252 62 128 chr20 1180248 1180898 -65487107 - HAL1 LINE L1 -568 1939 1297 366 216 0 14 chr20 1180898 1180972 -65487033 - AluJo SINE Alu -164 138 66 1217 252 62 128 chr20 1180972 1181244 -65486761 - HAL1 LINE L1 -1210 1297 1009 638 207 48 85 chr20 1181256 1181507 -65486498 - L1ME1 LINE L1 -1 6177 5928 973 310 64 34 chr20 1181539 1182072 -65485933 - HAL1 LINE L1 -1549 958 410 567 219 206 48 chr20 1182075 1182386 -65485619 - HAL1 LINE L1 -2136 371 12 2175 122 7 0 chr20 1182705 1183008 -65484997 - AluSx SINE Alu -7 305 1 811 173 8 8 chr20 1184076 1184209 -65483796 - FLAM_A SINE Alu 0 133 1 2589 213 49 11 chr20 1184982 1185611 -65482394 - L1ME1 LINE L1 0 6560 5908 2098 154 68 0 chr20 1185623 1186005 -65482000 - L1MD2 LINE L1 -14 6345 5938 363 224 0 0 chr20 1186005 1186081 -65481924 - L1ME1 LINE L1 -1815 4725 4650 2996 132 34 38 chr20 1186081 1186121 -65481884 - L1MB7 LINE L1 -253 5931 5892 1972 115 0 11 chr20 1186121 1186391 -65481614 - AluSq SINE Alu -45 268 2 2996 132 34 38 chr20 1186391 1186902 -65481103 - L1MB7 LINE L1 -292 5892 5382 2202 213 92 14 chr20 1186906 1187623 -65480382 - L1ME1 LINE L1 -2391 4149 3377 254 194 32 16 chr20 1187624 1187686 -65480319 - L1ME1 LINE L1 -3101 3439 3377 284 253 25 13 chr20 1187735 1187814 -65480191 - L1ME1 LINE L1 -3086 3454 3375 275 247 26 13 chr20 1187861 1187938 -65480067 - L1ME1 LINE L1 -3086 3454 3377 230 234 31 16 chr20 1187939 1188003 -65480002 - L1ME1 LINE L1 -3101 3439 3375 225 242 30 15 chr20 1187998 1188064 -65479941 - L1ME1 LINE L1 -3097 3443 3377 * 275 253 25 13 chr20 1188050 1188129 -65479876 - L1ME1 LINE L1 -3086 3454 3375 285 253 25 13 chr20 1188176 1188255 -65479750 - L1ME1 LINE L1 -3086 3454 3375 255 279 25 13 chr20 1188302 1188381 -65479624 - L1ME1 LINE L1 -3086 3454 3375 * 263 260 26 13 chr20 1188365 1188442 -65479563 - L1ME1 LINE L1 -3086 3454 3377 253 212 30 15 chr20 1188439 1188505 -65479500 - L1ME1 LINE L1 -3097 3443 3377 * 269 253 25 13 chr20 1188491 1188570 -65479435 - L1ME1 LINE L1 -3086 3454 3375 263 260 26 13 chr20 1188554 1188631 -65479374 - L1ME1 LINE L1 -3086 3454 3377 * 268 234 26 13 chr20 1188750 1188827 -65479178 - L1ME1 LINE L1 -3097 3443 3366 254 239 28 14 chr20 1188871 1188942 -65479063 - L1ME1 LINE L1 -3092 3448 3377 * 284 253 25 13 chr20 1188928 1189007 -65478998 - L1ME1 LINE L1 -3086 3454 3375 263 260 26 13 chr20 1188991 1189068 -65478937 - L1ME1 LINE L1 -3086 3454 3377 * 987 232 67 20 chr20 1189187 1189484 -65478521 - L1ME1 LINE L1 -3097 3443 3133 2450 137 15 25 chr20 1189484 1189885 -65478120 - Tigger2a DNA MER2_type -36 398 2 2327 213 54 54 chr20 1189886 1190568 -65477437 - L1ME1 LINE L1 -3465 3075 2394 1746 170 6 46 chr20 1190568 1190891 -65477114 - AluSx SINE Alu -2 310 1 2327 213 54 54 chr20 1190891 1191513 -65476492 - L1ME1 LINE L1 -4146 2394 1774 1955 150 7 13 chr20 1191513 1191813 -65476192 - AluJo SINE Alu -14 298 1 2327 213 54 54 chr20 1191813 1191947 -65476058 - L1ME1 LINE L1 -4766 1774 1641 322 293 20 0 chr20 1192434 1192533 -65475472 - L1ME1 LINE L1 -5923 607 507 767 137 65 0 chr20 1192920 1193044 -65474961 + FLAM_C SINE Alu 1 132 -11 1474 243 180 5 chr20 1193775 1194291 -65473714 - L2 LINE L2 -2 3311 2711 256 356 34 25 chr20 1194349 1194467 -65473538 - MIR SINE MIR -72 136 18 352 179 8 0 chr20 1194751 1194834 -65473171 - MIR SINE MIR -58 150 80 222 282 94 68 chr20 1196305 1196422 -65471583 + MIR3 SINE MIR 44 163 -45 427 215 83 56 chr20 1196628 1196772 -65471233 + MIR SINE MIR 96 243 -19 192 270 101 11 chr20 1197423 1197512 -65470493 + L2 LINE L2 3171 3267 -5 215 288 0 17 chr20 1197619 1197678 -65470327 + (TTG)n Simple_repeat Simple_repeat 1 58 0 615 267 6 6 chr20 1197907 1198068 -65469937 + MIR3 SINE MIR 35 195 -13 301 257 0 0 chr20 1198169 1198243 -65469762 - MIR SINE MIR -112 150 77 327 308 70 27 chr20 1198567 1198752 -65469253 - MIR SINE MIR -11 251 59 218 309 52 10 chr20 1198756 1198853 -65469152 + MIR3 SINE MIR 12 112 -96 21 0 0 0 chr20 1199253 1199274 -65468731 + AT_rich Low_complexity Low_complexity 1 21 0 205 189 0 0 chr20 1199587 1199624 -65468381 - MIR SINE MIR -91 117 81 506 243 95 6 chr20 1199924 1200093 -65467912 + MIR3 SINE MIR 4 187 -21 1957 137 0 0 chr20 1200115 1200392 -65467613 - AluSx SINE Alu -1 311 35 213 273 42 50 chr20 1200958 1201101 -65466904 + MIR SINE MIR 45 185 -67 665 254 123 17 chr20 1201181 1201417 -65466588 - Charlie8 DNA MER1_type -2154 263 3 222 188 0 21 chr20 1202228 1202276 -65465729 - L2 LINE L2 -3 3269 3223 216 293 49 12 chr20 1202420 1202502 -65465503 + MIR SINE MIR 152 236 -26 442 309 13 7 chr20 1202615 1202764 -65465241 - MIR SINE MIR -111 151 2 218 287 43 21 chr20 1202864 1202958 -65465047 - MIR SINE MIR -122 140 45 246 276 113 81 chr20 1202986 1203269 -65464736 + L3 LINE CR1 1236 1527 -50 269 301 98 0 chr20 1203942 1204065 -65463940 + MIR SINE MIR 36 170 -92 274 291 102 33 chr20 1204284 1204416 -65463589 - MIR SINE MIR -65 143 4 361 259 11 136 chr20 1205172 1205451 -65462554 + MIR3 SINE MIR 7 255 -7 342 294 26 46 chr20 1205526 1205679 -65462326 + L3 LINE CR1 1427 1576 -1 237 254 127 0 chr20 1205942 1206052 -65461953 + L2 LINE L2 3188 3311 -2 745 163 0 8 chr20 1206136 1206648 -65461357 + (TG)n Simple_repeat Simple_repeat 1 507 0 782 157 6 0 chr20 1206688 1206866 -65461139 + (TG)n Simple_repeat Simple_repeat 2 180 0 684 141 0 32 chr20 1206881 1207066 -65460939 + (TG)n Simple_repeat Simple_repeat 2 180 0 3256 209 67 29 chr20 1207161 1207460 -65460545 - L1ME1 LINE L1 -5 6161 5875 1753 102 0 4 chr20 1207460 1207695 -65460310 - AluSg/x SINE Alu -4 306 73 3256 209 67 29 chr20 1207695 1208309 -65459696 - L1ME1 LINE L1 -291 5875 5201 650 114 0 70 chr20 1208400 1208514 -65459491 - AluJb SINE Alu -8 304 199 297 245 115 70 chr20 1209310 1209478 -65458527 - MIR SINE MIR -62 146 3 575 283 140 21 chr20 1210908 1211187 -65456818 + L1ME4a LINE L1 5527 5838 -283 241 330 17 34 chr20 1212045 1212163 -65455842 + MIR SINE MIR 30 145 -63 541 259 89 49 chr20 1212252 1212476 -65455529 - Charlie8 DNA MER1_type -2184 233 1 1355 246 130 27 chr20 1213127 1214057 -65453948 - L2 LINE L2 -2 3311 2301 410 286 73 68 chr20 1214271 1214505 -65453500 - MIR SINE MIR 0 262 28 2446 82 16 0 chr20 1214599 1214904 -65453101 + AluSg SINE Alu 1 310 0 364 276 59 26 chr20 1216250 1216402 -65451603 + MIR3 SINE MIR 37 193 -15 2237 122 0 3 chr20 1217394 1217706 -65450299 - AluSx SINE Alu -1 311 1 405 0 0 0 chr20 1218297 1218342 -65449663 + (CA)n Simple_repeat Simple_repeat 2 46 0 1387 169 73 15 chr20 1218352 1218624 -65449381 + AluJo SINE Alu 5 292 -20 3866 160 30 32 chr20 1218661 1218706 -65449299 - L1MB7 LINE L1 -16 6168 6124 2132 116 0 26 chr20 1218706 1219009 -65448996 + AluSx SINE Alu 1 295 -17 3866 160 30 32 chr20 1219009 1219702 -65448303 - L1MB7 LINE L1 -60 6124 5432 195 195 24 0 chr20 1220685 1220726 -65447279 - MIR SINE MIR -57 151 110 251 246 35 0 chr20 1220785 1220842 -65447163 - MIR3 SINE MIR -6 202 144 207 339 152 11 chr20 1221247 1221530 -65446475 + L2 LINE L2 2540 2862 -452 605 259 25 20 chr20 1221769 1221970 -65446035 - MIR SINE MIR -18 244 43 186 231 15 46 chr20 1222902 1222967 -65445038 + MIR SINE MIR 34 96 -166 625 280 30 0 chr20 1223617 1223817 -65444188 + MIR SINE MIR 47 252 -10 281 256 112 8 chr20 1224785 1224910 -65443095 + MIR3 SINE MIR 65 202 -6 190 311 133 22 chr20 1225275 1225410 -65442595 + MIR SINE MIR 67 216 -46 354 211 26 0 chr20 1226153 1226229 -65441776 + MIR SINE MIR 77 154 -108 425 302 149 34 chr20 1226237 1226558 -65441447 - MLT1J LTR MaLR -32 479 122 260 264 69 0 chr20 1226589 1226661 -65441344 - MLT1L LTR MaLR -536 79 3 369 0 0 0 chr20 1227589 1227630 -65440375 + (TG)n Simple_repeat Simple_repeat 2 42 0 232 290 130 29 chr20 1228942 1229080 -65438925 + MIR SINE MIR 81 232 -30 883 194 5 5 chr20 1230297 1230483 -65437522 - L1MB7 LINE L1 0 6184 5999 286 212 12 12 chr20 1230532 1230617 -65437388 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1230599 1230684 -65437321 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1230666 1230751 -65437254 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1230800 1230885 -65437120 - L1MB7 LINE L1 -101 6083 5999 286 224 12 12 chr20 1230867 1230952 -65437053 - L1MB7 LINE L1 -101 6083 5999 * 299 224 12 12 chr20 1230934 1231019 -65436986 - L1MB7 LINE L1 -101 6083 5999 * 301 212 12 12 chr20 1231001 1231086 -65436919 - L1MB7 LINE L1 -101 6083 5999 286 224 12 12 chr20 1231068 1231153 -65436852 - L1MB7 LINE L1 -101 6083 5999 * 301 212 12 12 chr20 1231135 1231220 -65436785 - L1MB7 LINE L1 -101 6083 5999 286 212 12 12 chr20 1231202 1231287 -65436718 - L1MB7 LINE L1 -101 6083 5999 * 286 212 12 12 chr20 1231269 1231354 -65436651 - L1MB7 LINE L1 -101 6083 5999 * 809 160 28 28 chr20 1231336 1231517 -65436488 - L1MB7 LINE L1 -101 6083 5903 365 292 65 13 chr20 1231937 1232091 -65435914 + L2 LINE L2 2866 3027 -245 241 163 0 20 chr20 1239524 1239573 -65428432 + G-rich Low_complexity Low_complexity 2 49 0 325 261 0 109 chr20 1240617 1240683 -65427322 - MIR SINE MIR -3 259 210 1855 147 13 7 chr20 1240683 1240982 -65427023 - AluJb SINE Alu -11 301 1 325 261 0 109 chr20 1240982 1241034 -65426971 - MIR SINE MIR -52 210 154 1124 241 20 3 chr20 1242688 1242991 -65425014 + L1MD2 LINE L1 4076 4383 -1763 1938 139 7 7 chr20 1242991 1243346 -65424659 + AluSx SINE Alu 1 355 0 829 144 0 8 chr20 1243395 1243527 -65424478 + FLAM_C SINE Alu 1 131 -2 2058 232 92 12 chr20 1243549 1244032 -65423973 + L1MD2 LINE L1 4387 4948 -1198 1809 149 3 0 chr20 1244032 1244345 -65423660 + AluSx SINE Alu 1 314 0 2058 232 92 12 chr20 1244345 1244581 -65423424 + L1MD2 LINE L1 4948 5164 -982 300 160 120 0 chr20 1244584 1244659 -65423346 + L1MD2 LINE L1 5204 5287 -859 1261 140 4 68 chr20 1244673 1244909 -65423096 + AluJb SINE Alu 85 305 -7 3849 180 44 21 chr20 1244910 1245183 -65422822 + L1MD2 LINE L1 5311 5576 -783 2052 128 0 0 chr20 1245183 1245472 -65422533 - AluJb SINE Alu -21 291 3 3849 180 44 21 chr20 1245472 1246011 -65421994 + L1MD2 LINE L1 5576 6142 -217 465 277 40 0 chr20 1246009 1246157 -65421848 + L1MD3 LINE L1 7832 7985 -10 * 21 0 0 0 chr20 1246168 1246189 -65421816 + AT_rich Low_complexity Low_complexity 1 21 0 1000 230 0 0 chr20 1247625 1247821 -65420184 + MLT1B LTR MaLR 191 386 -4 246 309 39 1 chr20 1248171 1248276 -65419729 - MIR SINE MIR -87 121 16 622 302 95 59 chr20 1250285 1250509 -65417496 + L2 LINE L2 2583 2798 -474 312 315 129 46 chr20 1250509 1250811 -65417194 + MER102a DNA MER1_type 1 327 -3 622 302 95 59 chr20 1250811 1251214 -65416791 + L2 LINE L2 2798 3234 -38 1876 162 3 0 chr20 1251353 1251655 -65416350 - AluJo SINE Alu -9 303 1 582 268 70 29 chr20 1251658 1251901 -65416104 + MER102b DNA MER1_type 70 322 -19 972 203 143 4 chr20 1252432 1252698 -65415307 + MER2 DNA MER2_type 43 345 0 204 185 148 0 chr20 1252769 1252823 -65415182 - L2 LINE L2 -1 3271 3210 287 293 61 100 chr20 1252856 1253136 -65414869 + L2 LINE L2 3004 3272 0 832 234 107 144 chr20 1253146 1253800 -65414205 + MER20B DNA MER1_type 32 661 -122 210 304 121 29 chr20 1255002 1255209 -65412796 + L2 LINE L2 2344 2569 -745 205 239 0 0 chr20 1255454 1255500 -65412505 - L2 LINE L2 -2 3311 3266 295 269 244 0 chr20 1255536 1255655 -65412350 + L2 LINE L2 3165 3312 -1 378 214 50 94 chr20 1256444 1256603 -65411402 + MIR SINE MIR 108 259 -3 755 300 79 30 chr20 1256604 1257196 -65410809 - L2 LINE L2 0 3313 2614 207 330 82 0 chr20 1257365 1257462 -65410543 - MIR SINE MIR -64 144 40 234 122 61 20 chr20 1258272 1258321 -65409684 + L1ME LINE L1 5599 5649 -472 353 286 43 87 chr20 1258560 1258721 -65409284 + L1ME4a LINE L1 5956 6109 -12 334 227 69 118 chr20 1259198 1259401 -65408604 - MIR SINE MIR 0 262 70 1698 183 0 0 chr20 1260279 1260568 -65407437 - AluJb SINE Alu -23 289 1 380 315 55 6 chr20 1260661 1260842 -65407163 - MER117 DNA MER1_type -3 194 5 349 193 149 79 chr20 1260842 1260927 -65407078 + L2 LINE L2 3151 3247 -25 1442 144 16 84 chr20 1260927 1261247 -65406758 - AluJb SINE Alu -14 298 1 349 193 149 79 chr20 1261247 1261275 -65406730 + L2 LINE L2 3247 3272 0 426 269 170 0 chr20 1261366 1261507 -65406498 + MIR SINE MIR 77 241 -21 227 276 52 0 chr20 1261729 1261787 -65406218 - L2 LINE L2 -16 3256 3196 321 235 0 35 chr20 1261956 1262041 -65405964 - MLT1J LTR MaLR -350 161 80 211 286 16 0 chr20 1262073 1262136 -65405869 + MIR3 SINE MIR 109 172 -36 1080 288 87 5 chr20 1262301 1262679 -65405326 - MLT1I LTR MaLR 0 409 1 707 212 74 5 chr20 1262873 1263159 -65404846 + MLT1A1 LTR MaLR 30 365 0 208 342 38 0 chr20 1263174 1263253 -65404752 + MIR SINE MIR 117 198 -64 183 100 0 0 chr20 1263843 1263873 -65404132 + (CATGT)n Simple_repeat Simple_repeat 3 32 0 4411 94 3 24 chr20 1263952 1264338 -65403667 + L1PB2 LINE L1 5539 5909 -242 1844 82 0 16 chr20 1264338 1264593 -65403412 - AluSg SINE Alu 0 310 60 4411 94 3 24 chr20 1264593 1264831 -65403174 + L1PB2 LINE L1 5909 6150 -1 221 333 65 0 chr20 1265031 1265124 -65402881 - MIR SINE MIR -65 143 45 187 192 0 151 chr20 1265168 1265241 -65402764 - MIR SINE MIR -118 90 29 234 308 47 9 chr20 1265376 1265483 -65402522 + MIR3 SINE MIR 50 160 -48 566 228 71 3 chr20 1266068 1266253 -65401752 - MIR SINE MIR -7 255 11 249 313 0 61 chr20 1267172 1267287 -65400718 + MIR SINE MIR 22 129 -79 1162 285 106 31 chr20 1267486 1267998 -65400007 + MLT1K LTR MaLR 33 582 -6 1659 152 33 26 chr20 1268082 1268384 -65399621 - AluSx SINE Alu -8 304 1 713 80 30 10 chr20 1268735 1268835 -65399170 - AluSq/x SINE Alu -209 103 2 1915 157 23 0 chr20 1269224 1269529 -65398476 - AluJo SINE Alu 0 312 1 1201 227 134 8 chr20 1269846 1270203 -65397802 - MER97b DNA MER1_type? -632 421 20 202 269 144 10 chr20 1270266 1270370 -65397635 + MIR3 SINE MIR 7 124 -84 231 36 0 0 chr20 1270932 1270960 -65397045 + (CA)n Simple_repeat Simple_repeat 1 28 0 202 231 115 0 chr20 1271623 1271675 -65396330 + L2 LINE L2 3189 3246 -67 2220 75 0 3 chr20 1271751 1272043 -65395962 + AluSq SINE Alu 1 291 -22 1896 167 0 0 chr20 1272108 1272414 -65395591 + AluJb SINE Alu 1 306 -6 207 273 0 0 chr20 1272472 1272516 -65395489 + MER91 DNA MER1_type 1 44 -96 3106 57 16 0 chr20 1272531 1272902 -65395103 - MER51B LTR ERV1 0 377 1 502 271 53 21 chr20 1272916 1273196 -65394809 + L1ME4a LINE L1 5566 5856 -265 431 272 66 92 chr20 1273200 1273428 -65394577 + L1ME4a LINE L1 5900 6121 0 30 27 0 0 chr20 1273406 1273443 -65394562 + AT_rich Low_complexity Low_complexity 1 37 0 * 1433 189 23 8 chr20 1273806 1274071 -65393934 + MLT1F LTR MaLR 1 269 -273 6034 194 40 17 chr20 1274204 1276609 -65391396 - L1MC2 LINE L1 -146 6592 4136 14842 143 43 42 chr20 1276619 1278707 -65389298 - L1MA3 LINE L1 -10 7714 5630 180 0 0 0 chr20 1278707 1278727 -65389278 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 14842 143 43 42 chr20 1278727 1279110 -65388895 - L1MA3 LINE L1 -2094 5630 5249 1454 108 10 20 chr20 1279110 1279314 -65388691 - AluSq SINE Alu -24 289 88 14842 143 43 42 chr20 1279314 1280930 -65387075 - L1MA3 LINE L1 -2475 5249 3636 1196 55 0 22 chr20 1280930 1281112 -65386893 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1908 151 7 10 chr20 1281114 1281413 -65386592 - AluSx SINE Alu -14 298 1 14842 143 43 42 chr20 1281413 1281968 -65386037 - L1MA3 LINE L1 -4088 3636 3083 1646 179 29 0 chr20 1281968 1282248 -65385757 - AluJb SINE Alu -14 298 11 14842 143 43 42 chr20 1282248 1284555 -65383450 - L1MA3 LINE L1 -4641 3083 9 1057 244 7 21 chr20 1284554 1284833 -65383172 - L1MC2 LINE L1 -2391 4149 3875 * 1530 194 27 36 chr20 1284875 1285240 -65382765 - L1MC2 LINE L1 -3333 3207 2846 1088 209 24 91 chr20 1285267 1285641 -65382364 - L1MC2 LINE L1 -4887 1653 1305 1865 161 0 16 chr20 1285641 1285957 -65382048 + AluJb SINE Alu 1 311 -1 765 162 0 0 chr20 1285960 1286077 -65381928 + FLAM_C SINE Alu 2 118 -25 25 31 0 0 chr20 1286077 1286109 -65381896 + AT_rich Low_complexity Low_complexity 1 32 0 976 237 70 40 chr20 1286110 1286122 -65381883 - L1MC2 LINE L1 -5228 1315 1305 2433 90 3 3 chr20 1286122 1286432 -65381573 - AluSp SINE Alu -3 310 1 976 237 70 40 chr20 1286432 1286816 -65381189 - L1MC2 LINE L1 -5238 1305 907 257 269 21 32 chr20 1287242 1287335 -65380670 - L1MC2 LINE L1 -6098 442 351 681 67 0 0 chr20 1287344 1287434 -65380571 + AluSg/x SINE Alu 214 303 -9 990 278 24 7 chr20 1287449 1287744 -65380261 - L1MC2 LINE L1 -6207 333 34 1404 199 36 48 chr20 1287782 1288058 -65379947 - L1ME1 LINE L1 -6 6160 5887 2393 85 0 0 chr20 1288058 1288351 -65379654 + AluSc SINE Alu 1 293 -16 1404 199 36 48 chr20 1288351 1288430 -65379575 - L1ME1 LINE L1 -279 5887 5809 1500 170 8 133 chr20 1289091 1289467 -65378538 + MER7A DNA MER2_type 1 327 -19 688 137 103 57 chr20 1289830 1290005 -65378000 + Charlie1 DNA MER1_type 2382 2564 -197 1037 214 47 85 chr20 1290006 1290371 -65377634 + HAL1 LINE L1 1297 1647 -860 1125 237 21 21 chr20 1290384 1290667 -65377338 + MLT1H LTR MaLR 15 297 -252 201 162 0 0 chr20 1290987 1291024 -65376981 + A-rich Low_complexity Low_complexity 1 37 0 222 262 84 9 chr20 1291207 1291314 -65376691 + L2 LINE L2 2538 2652 -662 544 209 368 19 chr20 1291328 1291687 -65376318 - MLT1H1 LTR MaLR 0 555 72 841 128 8 0 chr20 1291769 1291886 -65376119 + AluJb SINE Alu 169 286 -26 193 296 37 46 chr20 1292136 1292244 -65375761 + L2 LINE L2 3160 3266 -47 4829 38 24 2 chr20 1293180 1293758 -65374247 + LTR10C LTR ERV1 1 591 0 291 218 100 45 chr20 1294136 1294246 -65373759 + MLT1L LTR MaLR 43 158 -457 1810 178 65 31 chr20 1294305 1294688 -65373317 - MSTD LTR MaLR 0 396 1 1170 224 50 37 chr20 1295065 1295448 -65372557 + LTR37A LTR ERV1 39 426 0 2230 99 3 0 chr20 1295756 1296049 -65371956 + AluY SINE Alu 4 297 -14 2231 162 84 41 chr20 1296057 1296520 -65371485 - MLT1D LTR MaLR 0 505 23 444 253 48 42 chr20 1296616 1296782 -65371223 + L1ME2 LINE L1 5897 6063 -101 208 196 22 0 chr20 1296877 1296923 -65371082 + (TAGA)n Simple_repeat Simple_repeat 4 50 0 23 78 0 0 chr20 1298448 1298499 -65369506 + AT_rich Low_complexity Low_complexity 1 51 0 762 198 17 17 chr20 1299156 1299328 -65368677 - MER5B DNA MER1_type 0 178 7 334 304 74 0 chr20 1300084 1300219 -65367786 + MIR3 SINE MIR 35 179 -29 1198 301 40 0 chr20 1303212 1303610 -65364395 + L1MC/D LINE L1 5405 5818 -1990 2162 111 0 0 chr20 1303621 1303900 -65364105 - AluSq SINE Alu -13 300 22 604 90 0 0 chr20 1303900 1303978 -65364027 - AluS SINE Alu -234 79 2 256 93 5 43 chr20 1305416 1305466 -65362539 - MIR SINE MIR -62 146 101 26 64 0 0 chr20 1305479 1305526 -65362479 + AT_rich Low_complexity Low_complexity 1 47 0 297 268 105 65 chr20 1306861 1307014 -65360991 + MLT1L LTR MaLR 240 398 -217 2450 133 13 5 chr20 1307107 1307490 -65360515 + L1MC1 LINE L1 5939 6324 -9 383 239 0 34 chr20 1307777 1307865 -65360140 + MER112 DNA MER1_type 168 252 -8 189 0 0 0 chr20 1308136 1308157 -65359848 + (CTG)n Simple_repeat Simple_repeat 1 21 0 228 272 61 35 chr20 1308887 1309001 -65359004 + L1MEc LINE L1 89 205 -6191 2636 217 43 2 chr20 1309019 1309622 -65358383 + L1MEc LINE L1 297 924 -5472 298 143 0 18 chr20 1309633 1309689 -65358316 + L1MEc LINE L1 1027 1081 -5315 * 2923 204 79 12 chr20 1309681 1310723 -65357282 + L1ME1 LINE L1 4916 6015 -151 1218 143 52 149 chr20 1312309 1312638 -65355367 + AluJo SINE Alu 1 297 -5 2153 113 3 3 chr20 1313892 1314192 -65353813 + AluSx SINE Alu 1 300 -12 938 286 134 24 chr20 1314289 1314905 -65353100 + L2 LINE L2 2611 3304 -9 214 250 0 0 chr20 1315690 1315742 -65352263 + A-rich Low_complexity Low_complexity 4 55 0 280 62 42 0 chr20 1315954 1316002 -65352003 + L1MB8 LINE L1 6124 6173 -5 519 231 127 0 chr20 1316025 1316198 -65351807 + L1MC4 LINE L1 6741 7011 -827 1624 144 41 14 chr20 1316348 1316639 -65351366 + AluJb SINE Alu 1 299 -13 471 258 65 31 chr20 1316675 1316904 -65351101 + L1MC4 LINE L1 7112 7348 -694 308 248 155 8 chr20 1317039 1317168 -65350837 + L1MC4 LINE L1 7492 7639 -403 208 293 57 57 chr20 1317264 1317370 -65350635 - MIR SINE MIR -109 153 48 206 270 32 0 chr20 1317460 1317523 -65350482 + L2 LINE L2 2630 2694 -620 662 269 110 35 chr20 1317560 1318033 -65349972 + L2 LINE L2 2737 3259 -54 211 176 0 0 chr20 1319131 1319165 -65348840 + G-rich Low_complexity Low_complexity 1 34 0 231 218 0 0 chr20 1320515 1320570 -65347435 + GA-rich Low_complexity Low_complexity 3 57 0 309 181 0 0 chr20 1321280 1321359 -65346646 + MIR SINE MIR 83 137 -71 2060 181 81 12 chr20 1322361 1322792 -65345213 + MER65C LTR ERV1 1 461 0 458 325 51 60 chr20 1322792 1323207 -65344798 - L2 LINE L2 -27 3286 2876 1923 138 37 45 chr20 1323240 1323280 -65344725 - THE1C LTR MaLR 0 375 336 2206 121 3 7 chr20 1323280 1323587 -65344418 + AluSx SINE Alu 1 306 -6 1923 138 37 45 chr20 1323587 1323924 -65344081 - THE1C LTR MaLR -39 336 1 283 181 181 43 chr20 1323929 1324023 -65343982 + MLT1G LTR MaLR 1 107 -483 1436 267 54 14 chr20 1324053 1324495 -65343510 - MLT1J LTR MaLR -30 481 22 1272 193 28 44 chr20 1325265 1325586 -65342419 - L1MDa LINE L1 -4865 1675 1360 2670 134 26 16 chr20 1325586 1326011 -65341994 + LTR3 LTR ERVK 1 429 -3 18197 87 44 16 chr20 1326020 1328608 -65339397 + HERVK3 LTR ERVK 2 2661 -4582 459 156 77 0 chr20 1328607 1328724 -65339281 + HERVK3 LTR ERVK 3536 5364 -581 * 2713 76 0 0 chr20 1328720 1329063 -65338942 + HERVK3 LTR ERVK 3965 4307 -2936 * 4678 109 9 0 chr20 1329062 1329730 -65338275 + HERVK3 LTR ERVK 4685 5358 -1885 * 7188 93 6 23 chr20 1329725 1329785 -65338220 + HERVK3 LTR ERVK 6264 6324 -919 2194 108 0 14 chr20 1329785 1330110 -65337895 - AluY SINE Alu 0 311 2 7188 93 6 23 chr20 1330110 1331044 -65336961 + HERVK3 LTR ERVK 6324 7241 -2 2696 144 7 21 chr20 1331045 1331476 -65336529 + LTR3 LTR ERVK 1 425 -7 284 211 9 37 chr20 1331489 1331598 -65336407 - L1MDa LINE L1 -5173 1367 1262 489 191 0 11 chr20 1331600 1331689 -65336316 + AluJ/FLAM SINE Alu 2 89 -223 320 253 13 0 chr20 1332138 1332217 -65335788 - L3 LINE CR1 -107 1470 1391 465 320 163 7 chr20 1332472 1332625 -65335380 + MLT1K LTR MaLR 45 221 -367 1910 176 19 48 chr20 1332625 1332858 -65335147 - MLT1A1 LTR MaLR 0 365 146 2276 83 14 0 chr20 1332858 1333148 -65334857 + AluSp SINE Alu 2 295 -18 1910 176 19 48 chr20 1333148 1333289 -65334716 - MLT1A1 LTR MaLR -219 146 2 429 178 32 189 chr20 1333333 1333519 -65334486 - MLT1A2 LTR MaLR -103 287 122 2207 110 7 0 chr20 1333519 1333820 -65334185 - AluSp SINE Alu -6 307 5 429 178 32 189 chr20 1333820 1333850 -65334155 - MLT1A2 LTR MaLR -268 122 89 2573 105 17 168 chr20 1333850 1334391 -65333614 - LTR32 LTR ERVL 0 471 13 511 189 33 0 chr20 1334389 1334479 -65333526 - MLT1A2 LTR MaLR -281 93 1 * 412 244 81 16 chr20 1334540 1334663 -65333342 + MLT1K LTR MaLR 456 586 -2 886 220 11 0 chr20 1334753 1334930 -65333075 - MER5A DNA MER1_type -4 185 7 196 254 164 0 chr20 1335159 1335226 -65332779 + L2 LINE L2 2740 2817 -497 303 311 92 0 chr20 1335727 1335846 -65332159 - MIR SINE MIR -49 213 84 1602 215 65 71 chr20 1335846 1336354 -65331651 + MLT1D LTR MaLR 1 505 0 1682 236 83 14 chr20 1336805 1337287 -65330718 - REP3 LTR ERV -47 515 1 324 0 0 0 chr20 1337366 1337402 -65330603 + (TG)n Simple_repeat Simple_repeat 2 37 0 1672 183 7 7 chr20 1337405 1337684 -65330321 - AluJb SINE Alu -33 279 1 1107 124 34 27 chr20 1337684 1337889 -65330116 - L1MB3 LINE L1 -40 6143 5935 433 255 199 39 chr20 1338333 1338652 -65329353 + MLT1J LTR MaLR 59 470 -41 191 184 26 0 chr20 1338689 1338727 -65329278 - MIR SINE MIR -142 66 28 180 380 23 8 chr20 1338848 1338977 -65329028 + L2 LINE L2 2582 2712 -602 889 112 112 6 chr20 1339136 1339297 -65328708 - L1M4 LINE L1 -554 5630 5453 289 319 11 0 chr20 1339297 1339388 -65328617 + MLT1L LTR MaLR 218 309 -306 4053 205 30 13 chr20 1339388 1339739 -65328266 + L1M4 LINE L1 3682 4026 -2120 1814 176 0 0 chr20 1339739 1340054 -65327951 + AluJb SINE Alu 1 315 0 4053 205 30 13 chr20 1340054 1340646 -65327359 + L1M4 LINE L1 4026 4642 -1504 759 315 13 4 chr20 1340646 1340884 -65327121 + MER76 LTR ERV 415 654 -34 7022 236 50 28 chr20 1340899 1342168 -65325837 + L1MD2 LINE L1 2160 3399 -2960 2249 103 14 0 chr20 1342168 1342460 -65325545 + AluSx SINE Alu 1 296 -16 7022 236 50 28 chr20 1342460 1344502 -65323503 + L1MD2 LINE L1 3399 6358 -1 246 250 26 0 chr20 1344585 1344661 -65323344 - L2 LINE L2 -741 2573 2496 296 333 130 0 chr20 1344866 1345058 -65322947 + L2 LINE L2 2853 3069 -203 678 266 88 79 chr20 1345234 1345689 -65322316 + L2 LINE L2 2812 3270 -2 463 267 62 0 chr20 1345804 1345950 -65322055 - MIR SINE MIR -70 192 38 260 295 29 9 chr20 1346128 1346233 -65321772 - MIR SINE MIR -73 135 29 273 302 38 9 chr20 1346722 1346828 -65321177 - MIR SINE MIR -84 124 16 928 216 118 146 chr20 1347039 1347600 -65320405 + MLT1K LTR MaLR 35 579 -9 224 306 194 0 chr20 1347812 1348090 -65319915 - L2 LINE L2 -129 3184 2853 3684 111 26 76 chr20 1348225 1348883 -65319122 - L1PA16 LINE L1 -4 6162 5538 2588 168 13 13 chr20 1348968 1349691 -65318314 - L1PA16 LINE L1 -634 5532 4809 876 269 112 30 chr20 1349691 1350092 -65317913 + MLT1J LTR MaLR 59 492 -19 187 222 22 0 chr20 1350095 1350140 -65317865 - L2 LINE L2 -1092 2222 2177 1851 194 58 47 chr20 1350141 1350656 -65317349 + Charlie1b DNA MER1_type 1 521 -2 585 224 33 13 chr20 1351235 1351387 -65316618 - MIR SINE MIR -57 205 51 430 196 62 0 chr20 1351475 1351572 -65316433 - L2 LINE L2 -11 3302 3200 * 777 287 111 18 chr20 1351561 1351941 -65316064 + L2 LINE L2 2899 3313 0 491 260 147 12 chr20 1351928 1352310 -65315695 - L2 LINE L2 -147 3166 2741 * 716 191 212 7 chr20 1352697 1352915 -65315090 + MER66A LTR ERV1 97 249 -229 905 152 34 22 chr20 1352932 1353110 -65314895 + L1MA9 LINE L1 6133 6312 0 2555 159 18 8 chr20 1353116 1353717 -65314288 - L1MB7 LINE L1 -35 6149 5417 1192 128 0 0 chr20 1353731 1353895 -65314110 + AluSg/x SINE Alu 132 295 -17 240 130 0 143 chr20 1353929 1354006 -65313999 - Charlie8 DNA MER1_type -2266 151 86 611 307 28 0 chr20 1354115 1354333 -65313672 + L2 LINE L2 2839 3062 -251 676 276 122 5 chr20 1354433 1354551 -65313454 + MER8 DNA MER2_type 1 104 -135 1034 173 0 12 chr20 1354551 1354719 -65313286 - FRAM SINE Alu 0 166 1 676 276 122 5 chr20 1354719 1354814 -65313191 + MER8 DNA MER2_type 104 239 0 367 295 124 0 chr20 1354814 1354943 -65313062 + L2 LINE L2 3169 3313 0 418 223 32 0 chr20 1354947 1355041 -65312964 - MIR SINE MIR -70 138 42 334 269 17 17 chr20 1355879 1355998 -65312007 + L1MC/D LINE L1 5313 5431 -2377 324 314 99 42 chr20 1356016 1356299 -65311706 + L1MDa LINE L1 27 325 -6215 914 261 18 65 chr20 1356822 1357163 -65310842 + L1MDa LINE L1 926 1250 -5293 1434 170 63 7 chr20 1357173 1357189 -65310816 - L1MB5 LINE L1 -4 6170 6156 2293 91 0 3 chr20 1357189 1357485 -65310520 + AluSg SINE Alu 1 295 -15 1434 170 63 7 chr20 1357485 1357768 -65310237 - L1MB5 LINE L1 -18 6156 5854 1180 209 129 112 chr20 1357854 1358306 -65309699 - MER77 LTR ERV1 -7 598 134 1449 157 44 27 chr20 1358450 1358659 -65309346 - L1MB5 LINE L1 -315 5859 5642 2540 219 20 34 chr20 1358659 1359221 -65308784 + MLT2B3 LTR ERVL 1 554 0 1449 157 44 27 chr20 1359221 1359305 -65308700 - L1MB5 LINE L1 -532 5642 5561 6180 194 57 44 chr20 1359970 1361881 -65306124 - L1MB5 LINE L1 -591 5583 3633 3208 219 38 60 chr20 1361936 1362017 -65305988 + L1MD2 LINE L1 5255 5336 -1023 2425 84 0 0 chr20 1362017 1362316 -65305689 - AluY SINE Alu -12 299 1 3208 219 38 60 chr20 1362316 1362659 -65305346 + L1MD2 LINE L1 5336 5685 -674 3531 124 13 19 chr20 1362659 1363189 -65304816 + MER1A DNA MER1_type 1 527 0 3208 219 38 60 chr20 1363189 1363674 -65304331 + L1MD2 LINE L1 5685 6145 -214 895 193 164 81 chr20 1363802 1364249 -65303756 + MER66A LTR ERV1 97 478 0 413 288 8 0 chr20 1364260 1364378 -65303627 - MIR SINE MIR -115 147 29 2292 122 0 3 chr20 1365342 1365653 -65302352 + AluSx SINE Alu 2 311 -1 423 262 83 18 chr20 1365686 1365854 -65302151 + MIR SINE MIR 71 249 -13 2123 124 0 0 chr20 1365864 1366188 -65301817 + AluSx SINE Alu 1 324 0 366 224 103 17 chr20 1366195 1366311 -65301694 + L1MC/D LINE L1 5415 5540 -2268 285 220 202 0 chr20 1366322 1366431 -65301574 + L1MC/D LINE L1 5622 5752 -2056 732 185 151 5 chr20 1366527 1366732 -65301273 - HsTC2 DNA Tc2 -12 1886 1652 296 213 38 25 chr20 1366739 1366819 -65301186 - MER104 DNA Tc2 -89 91 11 401 224 69 9 chr20 1368041 1368157 -65299848 + MIR SINE MIR 119 241 -21 440 252 94 8 chr20 1368202 1368329 -65299676 - MIR SINE MIR -50 212 75 225 299 63 4 chr20 1368549 1368707 -65299298 + MIR SINE MIR 2 138 -70 507 291 64 9 chr20 1369101 1369321 -65298684 - L2 LINE L2 -5 3308 3077 221 305 235 20 chr20 1372921 1373223 -65294782 + L2 LINE L2 2834 3200 -72 249 216 0 0 chr20 1373879 1373930 -65294075 + MIR SINE MIR 99 149 -59 343 289 83 0 chr20 1374192 1374313 -65293692 - MIR3 SINE MIR -52 156 26 272 280 60 10 chr20 1374691 1374792 -65293213 - L2 LINE L2 -21 3276 3147 182 308 0 0 chr20 1374858 1374910 -65293095 + MIR SINE MIR 92 143 -119 183 311 67 37 chr20 1375474 1375609 -65292396 + L2 LINE L2 1295 1433 -1881 1424 113 43 43 chr20 1376109 1376339 -65291666 - MER30 DNA MER1_type 0 230 1 344 252 110 24 chr20 1376580 1376707 -65291298 - MIR SINE MIR -11 251 114 372 259 16 0 chr20 1376866 1376955 -65291050 + MIR SINE MIR 58 148 -62 383 291 50 27 chr20 1377033 1377209 -65290796 + MIR SINE MIR 18 208 -54 746 263 65 35 chr20 1377421 1377653 -65290352 - MIR SINE MIR -13 249 11 180 287 244 43 chr20 1377909 1378024 -65289981 + MIR SINE MIR 107 244 -18 307 122 0 0 chr20 1378765 1378814 -65289191 + U5 snRNA snRNA 1 49 -67 366 277 203 16 chr20 1379430 1379746 -65288259 + L1ME4a LINE L1 5531 5905 -216 292 316 64 0 chr20 1380247 1380368 -65287637 + MIR SINE MIR 25 151 -62 654 230 163 15 chr20 1380937 1381133 -65286872 - MIR SINE MIR -17 245 21 349 322 27 4 chr20 1382108 1382221 -65285784 + MIR SINE MIR 2 109 -103 475 292 63 63 chr20 1383243 1383575 -65284430 - MER102b DNA MER1_type -9 332 1 408 336 112 8 chr20 1383973 1384241 -65283764 - L2 LINE L2 -37 3235 2940 182 250 23 0 chr20 1384242 1384286 -65283719 - L2 LINE L2 -1042 2272 2228 346 258 111 79 chr20 1384385 1384575 -65283430 + MIR3 SINE MIR 48 243 -19 581 227 45 0 chr20 1385493 1385647 -65282358 + L1ME4a LINE L1 5589 5749 -372 275 241 134 36 chr20 1385751 1385863 -65282142 + L1ME4a LINE L1 5953 6075 -46 333 313 20 10 chr20 1385990 1386089 -65281916 + L1ME4a LINE L1 5964 6063 -58 2830 176 50 29 chr20 1386092 1386746 -65281259 - L1MA7 LINE L1 -4 6287 5620 1913 148 172 8 chr20 1387935 1388301 -65279704 + MSTA LTR MaLR 1 426 -2 441 299 72 24 chr20 1388810 1389017 -65278988 + MIR SINE MIR 25 241 -21 755 261 22 0 chr20 1389027 1389211 -65278794 + MER5A DNA MER1_type 2 189 0 747 177 165 6 chr20 1389436 1389600 -65278405 + MER3 DNA MER1_type 19 208 -1 219 324 67 9 chr20 1389806 1389911 -65278094 + MIR SINE MIR 95 205 -57 578 171 85 136 chr20 1390482 1390681 -65277324 + MIR SINE MIR 74 262 0 2324 83 0 6 chr20 1391295 1391608 -65276397 - AluY SINE Alu 0 311 1 905 177 66 25 chr20 1391726 1391924 -65276081 - MIR SINE MIR -44 218 13 703 274 68 13 chr20 1393486 1393723 -65274282 - MIR SINE MIR 0 262 13 235 340 85 39 chr20 1393952 1394105 -65273900 - L2 LINE L2 -13 3259 3100 193 185 123 31 chr20 1394171 1394236 -65273769 + MIR3 SINE MIR 95 165 -43 647 244 93 6 chr20 1394377 1394549 -65273456 + MIR SINE MIR 32 218 -44 610 231 208 46 chr20 1394547 1394763 -65273242 + MIR SINE MIR 10 260 -2 * 472 216 88 0 chr20 1394809 1394911 -65273094 - L2 LINE L2 -4 3309 3199 451 258 50 0 chr20 1395968 1396088 -65271917 - L2 LINE L2 0 3313 3188 499 272 65 22 chr20 1396116 1396416 -65271589 + L2 LINE L2 2727 3039 -274 2045 237 16 19 chr20 1396459 1396945 -65271060 + LTR10B LTR ERV1 21 505 0 290 310 23 0 chr20 1396951 1397038 -65270967 + L2 LINE L2 2959 3047 -225 865 267 85 12 chr20 1397067 1397397 -65270608 - MER20B DNA MER1_type -393 390 37 478 251 75 43 chr20 1397670 1397870 -65270135 - MIR SINE MIR -6 256 1 286 303 20 13 chr20 1398077 1398229 -65269776 + C-rich Low_complexity Low_complexity 1 153 0 200 309 37 44 chr20 1398241 1398377 -65269628 + C-rich Low_complexity Low_complexity 3 137 0 256 119 0 0 chr20 1398674 1398716 -65269289 + Alu SINE Alu 259 300 -2 230 225 56 14 chr20 1398855 1398926 -65269079 + L1ME3A LINE L1 5411 5484 -2324 346 186 14 0 chr20 1398926 1398996 -65269009 + LTR60 LTR ERV1 1 71 -515 960 247 44 76 chr20 1399130 1399210 -65268795 + LTR43 LTR ERV1 131 212 -492 2119 117 0 7 chr20 1399210 1399518 -65268487 + AluSg SINE Alu 1 306 -4 960 247 44 76 chr20 1399518 1399913 -65268092 + LTR43 LTR ERV1 212 684 -20 403 292 100 26 chr20 1399926 1400318 -65267687 + L1ME3A LINE L1 5484 5909 -280 579 286 150 18 chr20 1401350 1401577 -65266428 - MIR SINE MIR 0 262 6 927 290 62 31 chr20 1401633 1402019 -65265986 + L2 LINE L2 2892 3289 -24 245 254 127 0 chr20 1402044 1402115 -65265890 - L2 LINE L2 -65 3248 3169 599 216 6 0 chr20 1402129 1402291 -65265714 + (CA)n Simple_repeat Simple_repeat 2 164 0 439 257 104 50 chr20 1402296 1402544 -65265461 - L2 LINE L2 -167 3146 2794 1478 211 109 93 chr20 1402614 1403108 -65264897 - MLT1D LTR MaLR 0 505 4 191 167 83 67 chr20 1403286 1403346 -65264659 + MIR SINE MIR 190 250 -12 2218 90 3 3 chr20 1403360 1403659 -65264346 - AluSq SINE Alu -14 299 1 533 172 60 26 chr20 1403829 1403945 -65264060 - MER20 DNA MER1_type -99 120 1 807 280 64 15 chr20 1404058 1404322 -65263683 + MLT1J LTR MaLR 1 277 -234 348 306 116 7 chr20 1405368 1405515 -65262490 - MIR SINE MIR -65 197 35 350 268 121 56 chr20 1405616 1405814 -65262191 - MIR SINE MIR -31 231 21 258 242 145 73 chr20 1405858 1405982 -65262023 - L3 LINE CR1 -130 1447 1315 346 297 55 0 chr20 1406364 1406455 -65261550 + L2 LINE L2 3169 3264 -8 1992 115 7 0 chr20 1406472 1406759 -65261246 - AluSq SINE Alu -24 289 1 532 272 54 16 chr20 1406799 1406983 -65261022 - L2 LINE L2 -182 3090 2900 208 304 0 39 chr20 1407422 1407524 -65260481 + CT-rich Low_complexity Low_complexity 3 100 0 306 226 154 81 chr20 1407536 1407757 -65260248 - L2 LINE L2 -1 3271 3035 281 372 26 19 chr20 1407827 1407983 -65260022 - MIR SINE MIR -59 203 47 503 265 126 47 chr20 1408092 1408409 -65259596 + MLT1I LTR MaLR 39 380 -29 525 308 110 22 chr20 1409052 1409207 -65258798 - MIR SINE MIR 0 262 79 2205 162 18 5 chr20 1409207 1409590 -65258415 + MLT1B LTR MaLR 3 390 0 525 308 110 22 chr20 1409590 1409661 -65258344 - MIR SINE MIR -183 79 16 224 319 0 0 chr20 1409871 1409943 -65258062 - MIR SINE MIR -59 203 132 840 133 7 7 chr20 1409958 1410101 -65257904 - FLAM_C SINE Alu 0 143 1 257 273 53 68 chr20 1410101 1410233 -65257772 - MIR SINE MIR -111 151 22 480 230 149 6 chr20 1410689 1410850 -65257155 + L1ME1 LINE L1 506 689 -5707 414 226 0 17 chr20 1410859 1410974 -65257031 + L1ME1 LINE L1 1874 1986 -4410 1641 122 86 16 chr20 1410982 1411285 -65256720 - L1MA4A LINE L1 -102 6903 6580 648 158 0 0 chr20 1411285 1411399 -65256606 + CT-rich Low_complexity Low_complexity 3 116 0 611 108 0 0 chr20 1411400 1411483 -65256522 - AluSg/x SINE Alu -59 251 169 3615 123 19 57 chr20 1411485 1411894 -65256111 - L1MA4A LINE L1 -417 6588 6165 2096 121 0 0 chr20 1411894 1412192 -65255813 - AluSx SINE Alu -14 298 1 3615 123 19 57 chr20 1412192 1412758 -65255247 - L1MA4A LINE L1 -840 6165 1728 2921 134 30 44 chr20 1412805 1413667 -65254338 + L1MA4A LINE L1 4795 5643 -660 3069 136 12 4 chr20 1413674 1414180 -65253825 + L1MA4A LINE L1 5794 6303 0 7228 224 64 35 chr20 1414180 1414417 -65253588 + L1ME1 LINE L1 2985 3214 -3021 338 0 24 0 chr20 1414417 1414459 -65253546 + (CA)n Simple_repeat Simple_repeat 2 44 0 7228 224 64 35 chr20 1414459 1414847 -65253158 + L1ME1 LINE L1 3214 3589 -2646 2123 138 0 0 chr20 1414847 1415158 -65252847 - AluSx SINE Alu -1 311 1 7228 224 64 35 chr20 1415158 1416426 -65251579 + L1ME1 LINE L1 3589 4818 -1417 678 178 99 40 chr20 1416426 1416578 -65251427 - FAM SINE Alu -10 165 5 7228 224 64 35 chr20 1416578 1417147 -65250858 + L1ME1 LINE L1 4818 5369 -866 1511 138 0 94 chr20 1417147 1417445 -65250560 + AluJb SINE Alu 25 294 -18 7228 224 64 35 chr20 1417445 1418158 -65249847 + L1ME1 LINE L1 5369 6230 -5 238 250 73 0 chr20 1418520 1418588 -65249417 + MIR SINE MIR 117 189 -73 794 190 80 0 chr20 1418612 1418775 -65249230 - MER45A DNA AcHobo -2 176 1 235 250 19 0 chr20 1418909 1418961 -65249044 + L2 LINE L2 3255 3307 -6 248 340 39 19 chr20 1418970 1419073 -65248932 - MIR SINE MIR -109 153 49 450 257 135 14 chr20 1419336 1419484 -65248521 - MIR SINE MIR 0 262 97 816 172 86 6 chr20 1419531 1419694 -65248311 + MER45A DNA AcHobo 1 176 -2 269 300 12 0 chr20 1419718 1419798 -65248207 - MIR SINE MIR -73 189 109 338 333 108 27 chr20 1420431 1420653 -65247352 + MIR SINE MIR 23 262 0 622 213 16 8 chr20 1420965 1421087 -65246918 + MIR SINE MIR 31 153 -109 1530 229 128 36 chr20 1421656 1422157 -65245848 - MLT1H LTR MaLR 0 549 3 782 175 115 65 chr20 1423741 1423958 -65244047 - L1ME2 LINE L1 -2 6162 5935 * 9012 183 33 11 chr20 1423940 1425050 -65242955 - L1 LINE L1 -1872 5693 4415 2245 94 0 0 chr20 1425050 1425348 -65242657 - AluSx SINE Alu -14 298 1 9012 183 33 11 chr20 1425348 1426149 -65241856 - L1 LINE L1 -3150 4415 3633 1290 117 0 0 chr20 1426153 1426332 -65241673 - AluSg/x SINE Alu 0 310 132 273 158 0 0 chr20 1426332 1426370 -65241635 - Alu SINE Alu -261 39 2 21280 144 27 22 chr20 1426378 1429252 -65238753 - L1 LINE L1 -3933 3632 736 3546 118 28 2 chr20 1429252 1429752 -65238253 + LTR10D LTR ERV1 1 513 0 21280 144 27 22 chr20 1429752 1430472 -65237533 - L1 LINE L1 -6829 736 21 282 206 82 123 chr20 1430470 1430713 -65237292 - L1M4c LINE L1 -3938 2446 2214 * 362 217 60 0 chr20 1430775 1430858 -65237147 - Tigger5 DNA MER2_type -2235 88 1 * 427 210 148 37 chr20 1430858 1430953 -65237052 + Tigger5 DNA MER2_type 2208 2320 -3 1528 230 70 23 chr20 1430956 1431607 -65236398 - L1M4c LINE L1 -4169 2215 1454 790 174 0 0 chr20 1431608 1431723 -65236282 - FRAM SINE Alu -20 156 42 1862 290 25 37 chr20 1431729 1432513 -65235492 - L1M2c LINE L1 -4516 1385 663 314 338 40 18 chr20 1432715 1432916 -65235089 - L1M2c LINE L1 -5189 702 237 207 0 0 0 chr20 1433563 1433586 -65234419 + (TG)n Simple_repeat Simple_repeat 1 23 0 * 303 28 0 0 chr20 1433585 1433621 -65234384 + (GA)n Simple_repeat Simple_repeat 1 36 0 198 320 16 57 chr20 1433688 1433810 -65234195 + MIR3 SINE MIR 15 131 -77 1661 248 84 50 chr20 1434838 1435716 -65232289 - L2 LINE L2 -4 3309 2118 831 273 29 12 chr20 1435662 1435904 -65232101 + MIR SINE MIR 12 257 -5 * 1999 212 111 24 chr20 1436022 1436076 -65231929 - L1MC4 LINE L1 -143 7899 7851 1825 163 18 92 chr20 1436076 1436469 -65231536 + MLT1A1 LTR MaLR 2 365 0 1999 212 111 24 chr20 1436469 1436962 -65231043 - L1MC4 LINE L1 -191 7851 7304 355 254 103 30 chr20 1437416 1437581 -65230424 + MLT1L LTR MaLR 3 179 -436 209 83 28 0 chr20 1437685 1437721 -65230284 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 251 218 0 0 chr20 1438058 1438113 -65229892 - L1MA9 LINE L1 -1 6311 6257 335 95 0 149 chr20 1439034 1439108 -65228897 + L1PA10 LINE L1 6106 6168 0 213 333 8 83 chr20 1439171 1439303 -65228702 + MIR3 SINE MIR 81 202 -6 891 294 74 98 chr20 1439785 1440895 -65227110 + L2 LINE L2 2227 3312 -1 1143 211 28 66 chr20 1441196 1441485 -65226520 - AluJb SINE Alu -25 287 10 425 271 98 0 chr20 1441658 1441689 -65226316 - MER96 DNA MER1_type? -29 146 119 2865 96 11 16 chr20 1441689 1442066 -65225939 - THE1C LTR MaLR 0 375 1 425 271 98 0 chr20 1442066 1442167 -65225838 - MER96 DNA MER1_type? -56 119 1 391 269 221 6 chr20 1442703 1442911 -65225094 + MIR SINE MIR 3 252 -10 202 292 15 15 chr20 1442923 1442988 -65225017 - MIR3 SINE MIR -5 203 139 402 147 0 0 chr20 1443136 1443204 -65224801 + (TCCA)n Simple_repeat Simple_repeat 3 70 0 1332 302 68 0 chr20 1443575 1444058 -65223947 - L1ME3A LINE L1 -295 5875 5350 345 226 69 20 chr20 1445049 1445151 -65222854 + MIR SINE MIR 86 192 -70 435 269 87 13 chr20 1445350 1445499 -65222506 - MIR SINE MIR -97 165 6 401 333 45 50 chr20 1445904 1446126 -65221879 - L2 LINE L2 -42 3230 3010 990 256 190 27 chr20 1446188 1446441 -65221564 + MLT1G1 LTR MaLR 1 212 -378 3131 198 20 0 chr20 1446441 1446987 -65221018 + MER41D LTR ERV1 1 557 0 990 256 190 27 chr20 1446987 1447195 -65220810 + MLT1G1 LTR MaLR 212 521 -69 981 244 92 7 chr20 1447485 1447788 -65220217 + Charlie2 DNA MER1_type 31 359 -2423 1480 216 98 65 chr20 1447794 1448405 -65219600 + Charlie2 DNA MER1_type 2230 2860 -2 655 255 143 50 chr20 1448419 1448803 -65219202 - L2 LINE L2 -526 2788 2369 515 158 42 11 chr20 1448958 1449053 -65218952 + MIR SINE MIR 49 146 -62 1032 315 77 12 chr20 1449647 1450126 -65217879 + L2 LINE L2 2804 3313 0 260 386 31 6 chr20 1450821 1450984 -65217021 + L2 LINE L2 2595 2761 -553 1132 242 52 67 chr20 1450999 1451446 -65216559 - HAL1 LINE L1 -25 2482 2043 1526 122 29 29 chr20 1451459 1451737 -65216268 - L1MA1 LINE L1 0 6302 6025 1669 191 22 38 chr20 1452004 1452370 -65215635 - L1MA9 LINE L1 -38 6274 5915 * 1758 183 3 30 chr20 1452369 1452707 -65215298 + L1MA9 LINE L1 5594 5922 -390 995 242 34 18 chr20 1452667 1452994 -65215011 - L1MC5 LINE L1 -178 7783 7452 * 386 241 23 0 chr20 1453031 1453118 -65214887 + LTR16C LTR ERVL 282 370 -121 23 0 0 0 chr20 1453311 1453334 -65214671 + AT_rich Low_complexity Low_complexity 1 23 0 2499 40 0 10 chr20 1453489 1453785 -65214220 + AluY SINE Alu 1 293 -18 477 0 0 0 chr20 1453785 1453838 -65214167 + (CA)n Simple_repeat Simple_repeat 2 54 0 1804 277 95 8 chr20 1453868 1454497 -65213508 - L1MC4a LINE L1 -1866 6011 5328 740 219 10 86 chr20 1454663 1454955 -65213050 - L1MC4a LINE L1 -1094 5121 4852 25 0 0 0 chr20 1454962 1454987 -65213018 + AT_rich Low_complexity Low_complexity 1 25 0 1336 27 0 0 chr20 1454987 1455135 -65212870 - L1PA4 LINE L1 -3 6152 6005 317 158 18 0 chr20 1455139 1455196 -65212809 - L1MC4a LINE L1 -1353 4862 4805 4500 233 61 45 chr20 1455198 1455939 -65212066 - L1MEc LINE L1 -2426 3789 3061 1895 154 0 3 chr20 1455939 1456224 -65211781 + AluJb SINE Alu 1 284 -28 180 97 0 0 chr20 1456224 1456255 -65211750 + (CATA)n Simple_repeat Simple_repeat 2 32 0 4500 233 61 45 chr20 1456255 1457663 -65210342 - L1MEc LINE L1 -3153 3062 1639 656 108 30 175 chr20 1457673 1457839 -65210166 - L1MB3 LINE L1 -7 6176 6035 575 202 29 0 chr20 1457842 1457946 -65210059 - U6 snRNA snRNA 0 107 1 239 176 39 0 chr20 1457949 1458000 -65210005 + Alu SINE Alu 247 299 -2 3945 251 71 56 chr20 1458003 1458104 -65209901 - L1MEc LINE L1 -1710 4505 4407 2217 123 0 0 chr20 1458104 1458405 -65209600 + AluSq SINE Alu 1 301 -12 3945 251 71 56 chr20 1458405 1458725 -65209280 - L1MEc LINE L1 -1808 4407 4093 2381 70 0 10 chr20 1458725 1459025 -65208980 - AluY SINE Alu -14 297 1 3945 251 71 56 chr20 1459025 1460509 -65207496 - L1MEc LINE L1 -2122 4093 11 283 353 8 16 chr20 1460527 1460649 -65207356 - HAL1 LINE L1 -569 1938 1818 417 287 27 27 chr20 1460758 1460946 -65207059 - HAL1 LINE L1 -900 1607 1420 687 219 7 171 chr20 1461434 1461617 -65206388 - MIR SINE MIR -26 236 111 1887 138 10 17 chr20 1461617 1461913 -65206092 + AluSx SINE Alu 1 294 -18 687 219 7 171 chr20 1461913 1462003 -65206002 - MIR SINE MIR -151 111 8 23 0 0 0 chr20 1463237 1463260 -65204745 + AT_rich Low_complexity Low_complexity 1 23 0 406 277 7 29 chr20 1463287 1463427 -65204578 + L1ME4a LINE L1 5437 5576 -545 536 256 47 33 chr20 1463676 1463891 -65204114 + L1ME4a LINE L1 5609 5826 -295 294 305 44 66 chr20 1464042 1464120 -65203885 + MIR SINE MIR 2 80 -182 2603 142 66 22 chr20 1464120 1464530 -65203475 + MSTC LTR MaLR 1 428 0 294 305 44 66 chr20 1464530 1464677 -65203328 + MIR SINE MIR 80 222 -40 740 293 4 63 chr20 1464964 1465234 -65202771 - MIR SINE MIR -2 260 7 254 28 0 28 chr20 1465457 1465493 -65202512 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 1784 243 106 43 chr20 1467215 1467770 -65200235 + MLT1G1 LTR MaLR 3 592 -3 1363 286 46 8 chr20 1467824 1468345 -65199660 - L1M4 LINE L1 -3049 3097 2557 1839 227 85 20 chr20 1468351 1468867 -65199138 + MLT1F1 LTR MaLR 1 567 0 778 250 48 20 chr20 1468897 1469145 -65198860 + MLT1D LTR MaLR 207 461 -44 947 185 20 89 chr20 1469145 1469437 -65198568 - L1MB8 LINE L1 -13 6976 6705 * 31273 101 9 10 chr20 1469431 1475126 -65192879 - L1PA7 LINE L1 -4 6465 748 5615 205 58 34 chr20 1475126 1476213 -65191792 - L1MB8 LINE L1 -276 6719 5660 891 161 0 0 chr20 1476213 1476343 -65191662 - FLAM_C SINE Alu -3 130 1 5615 205 58 34 chr20 1476343 1477643 -65190362 - L1MB8 LINE L1 -1335 5660 4055 1531 229 48 66 chr20 1477662 1478392 -65189613 - L1MB8 LINE L1 -4936 1919 1203 682 246 126 0 chr20 1478393 1478584 -65189421 - L1MB8 LINE L1 -6629 230 16 293 227 0 0 chr20 1478597 1478663 -65189342 + MLT1D LTR MaLR 440 505 0 193 208 56 69 chr20 1478911 1478983 -65189022 + MIR3 SINE MIR 87 157 -51 224 264 240 23 chr20 1479547 1479676 -65188329 + MIR SINE MIR 106 262 0 195 328 153 8 chr20 1480281 1480412 -65187593 + MIR SINE MIR 100 249 -13 26 64 0 0 chr20 1483332 1483379 -65184626 + AT_rich Low_complexity Low_complexity 1 47 0 1099 218 21 0 chr20 1483580 1483814 -65184191 + MER106B DNA MER1_type 1 239 -820 2952 116 50 84 chr20 1483819 1484414 -65183591 + L1MA7 LINE L1 5711 6285 -6 2107 215 151 15 chr20 1484520 1485042 -65182963 - MLT1E LTR MaLR 0 593 1 879 182 27 27 chr20 1485042 1485259 -65182746 + MER106B DNA MER1_type 769 985 -74 1955 201 58 14 chr20 1485260 1485692 -65182313 + MLT1C LTR MaLR 1 451 -16 2100 137 0 9 chr20 1485757 1486072 -65181933 + AluJb SINE Alu 1 312 0 191 354 0 25 chr20 1487794 1487873 -65180132 + MIR SINE MIR 20 96 -166 * 251 314 21 57 chr20 1487872 1487942 -65180063 + L2 LINE L2 2263 2334 -980 2377 99 0 0 chr20 1487942 1488236 -65179769 - AluSq SINE Alu -19 294 1 251 314 21 57 chr20 1488236 1488359 -65179646 + L2 LINE L2 2334 2449 -865 677 160 65 53 chr20 1488392 1488561 -65179444 - LTR45B LTR ERV1 0 489 319 225 282 0 14 chr20 1488631 1488702 -65179303 - MER72 LTR ERV1 -243 479 410 262 337 128 8 chr20 1488916 1489165 -65178840 + L2 LINE L2 2480 2758 -556 1414 267 31 24 chr20 1489264 1489646 -65178359 - LTR16A LTR ERVL 0 450 66 315 98 0 20 chr20 1490053 1490104 -65177901 - L1MC2 LINE L1 -12 6332 6283 4676 153 18 31 chr20 1490104 1490971 -65177034 - L1MC3 LINE L1 -99 7686 6831 262 235 73 0 chr20 1491145 1491213 -65176792 - L2 LINE L2 0 3313 3241 4714 199 47 32 chr20 1491281 1491998 -65176007 + Tigger6a DNA MER2_type 1 706 -891 2317 117 3 0 chr20 1491998 1492306 -65175699 + AluSp SINE Alu 1 309 -4 4714 199 47 32 chr20 1492306 1492330 -65175675 + Tigger6a DNA MER2_type 706 728 -869 1864 131 109 68 chr20 1492330 1492741 -65175264 - MSTA LTR MaLR 0 428 1 4714 199 47 32 chr20 1492741 1493065 -65174940 + Tigger6a DNA MER2_type 728 1083 0 376 288 24 29 chr20 1493088 1493258 -65174747 - L2 LINE L2 -177 3136 2968 256 146 83 0 chr20 1493258 1493306 -65174699 - L2 LINE L2 -580 2734 2683 312 246 14 0 chr20 1493418 1493487 -65174518 - MER63 DNA MER1_type -14 1046 977 534 191 17 26 chr20 1493488 1493603 -65174402 - MER63 DNA MER1_type -85 751 12 183 261 0 0 chr20 1494348 1494394 -65173611 - L2 LINE L2 -6 3266 3221 311 152 139 0 chr20 1495335 1495414 -65172591 - MIR SINE MIR -70 192 103 30 0 0 0 chr20 1495871 1495901 -65172104 + AT_rich Low_complexity Low_complexity 1 30 0 462 313 59 28 chr20 1495962 1496317 -65171688 + LTR16A LTR ERVL 71 436 -14 566 323 98 26 chr20 1496328 1496857 -65171148 + HERV16 LTR ERVL 11 577 -4419 477 276 86 0 chr20 1497269 1497432 -65170573 + L1MDb LINE L1 4 180 -6229 1097 262 34 44 chr20 1497497 1498061 -65169944 + L1M4 LINE L1 3027 3584 -2562 204 283 0 0 chr20 1500084 1500137 -65167868 + MIR SINE MIR 204 256 -6 337 316 59 0 chr20 1500920 1501072 -65166933 - MIR SINE MIR -74 188 28 202 133 0 0 chr20 1502629 1502659 -65165346 + L2 LINE L2 3266 3295 -18 414 249 24 71 chr20 1503211 1503380 -65164625 + MER5B DNA MER1_type 18 178 0 491 315 65 9 chr20 1503459 1503691 -65164314 - MIR SINE MIR -4 258 14 209 216 93 31 chr20 1503758 1503855 -65164150 - MIR SINE MIR -77 185 83 249 241 147 23 chr20 1504640 1504799 -65163206 + MIR3 SINE MIR 12 183 -62 545 245 172 5 chr20 1505160 1505364 -65162641 - MLT1D LTR MaLR -125 380 143 1199 110 18 0 chr20 1505411 1505575 -65162430 + AluSp SINE Alu 1 167 -146 852 244 102 11 chr20 1505593 1505867 -65162138 + L1MC4a LINE L1 5567 5865 -1943 516 242 47 0 chr20 1506093 1506242 -65161763 + MIR3 SINE MIR 45 200 -8 375 278 9 0 chr20 1506625 1506740 -65161265 + L2 LINE L2 3193 3308 -5 367 227 118 0 chr20 1507585 1507695 -65160310 - MIR SINE MIR -38 224 102 1819 176 0 13 chr20 1507732 1508038 -65159967 - AluJb SINE Alu -10 302 1 530 258 111 29 chr20 1508142 1508421 -65159584 + MLT1I LTR MaLR 53 354 -55 538 165 61 0 chr20 1508456 1508571 -65159434 - MLT1D LTR MaLR -6 499 378 745 253 49 67 chr20 1508582 1508926 -65159079 + L1MA9 LINE L1 5939 6276 -36 281 197 154 124 chr20 1508926 1509160 -65158845 - MLT1D LTR MaLR -123 382 142 2888 245 25 27 chr20 1509160 1510057 -65157948 + L1M4c LINE L1 908 1802 -4582 2017 178 93 5 chr20 1510084 1510471 -65157534 - MER88 LTR ERVL -35 429 9 822 201 23 48 chr20 1510701 1511090 -65156915 + HERVL74 LTR ERVL 1997 2450 -3235 507 184 16 48 chr20 1511094 1511219 -65156786 + HERVL74 LTR ERVL 3530 3650 -2035 367 154 26 26 chr20 1511209 1511287 -65156718 + HERVL74 LTR ERVL 3907 3984 -1701 * 990 249 21 7 chr20 1511289 1511570 -65156435 + L1 LINE L1 3724 4008 -2138 323 272 60 60 chr20 1511587 1511771 -65156234 + L2 LINE L2 3130 3313 0 345 273 157 2 chr20 1512027 1512154 -65155851 + MIR SINE MIR 12 156 -52 444 82 0 0 chr20 1512635 1512696 -65155309 + (CTA)n Simple_repeat Simple_repeat 2 62 0 7389 185 27 10 chr20 1512707 1515144 -65152861 + L1MA8 LINE L1 3790 6260 -31 2310 111 0 40 chr20 1515266 1515617 -65152388 + MER1B DNA MER1_type 1 337 0 570 312 34 13 chr20 1515826 1516060 -65151945 + MIR SINE MIR 7 245 -17 2137 158 21 10 chr20 1516360 1516746 -65151259 + MLT1B LTR MaLR 1 390 0 255 281 16 55 chr20 1518660 1518788 -65149217 + MIR SINE MIR 65 187 -75 462 305 0 28 chr20 1519208 1519385 -65148620 - MIR SINE MIR -12 250 79 1810 130 53 56 chr20 1520619 1520952 -65147053 + THE1C LTR MaLR 1 335 -40 2232 99 3 0 chr20 1520952 1521266 -65146739 - AluSx SINE Alu 0 315 1 1810 130 53 56 chr20 1521266 1521307 -65146698 + THE1C LTR MaLR 335 375 0 2206 93 7 0 chr20 1522709 1523013 -65144992 + AluSp SINE Alu 1 306 0 730 274 20 5 chr20 1523419 1523616 -65144389 + MIR SINE MIR 28 227 -35 1683 216 92 0 chr20 1524637 1525026 -65142979 + L1MCa LINE L1 73 497 -5929 1106 229 107 7 chr20 1525026 1525336 -65142669 + Tigger6 DNA MER2_type 1255 1595 -2 185 292 62 0 chr20 1525563 1525676 -65142329 - L2 LINE L2 -661 2653 2534 546 250 48 36 chr20 1525684 1525852 -65142153 - MER63A DNA MER1_type -5 205 36 1933 177 110 3 chr20 1526080 1526470 -65141535 - MSTB1 LTR MaLR 0 432 1 332 200 125 0 chr20 1527999 1528079 -65139926 - MIR SINE MIR -70 192 103 1639 215 122 54 chr20 1528230 1528802 -65139203 + LTR36 LTR ERV1 1 611 0 553 312 60 23 chr20 1529207 1529560 -65138445 + LTR16A LTR ERVL 67 432 -18 458 292 36 18 chr20 1529574 1529742 -65138263 + HERV16 LTR ERVL 11 181 -4815 554 326 52 16 chr20 1529805 1530115 -65137890 + HERV16 LTR ERVL 274 594 -4402 593 241 42 12 chr20 1530507 1530673 -65137332 + L1MDb LINE L1 2 172 -6237 1191 287 24 20 chr20 1530748 1531299 -65136706 + L1M4 LINE L1 3028 3580 -2566 26 74 0 0 chr20 1531375 1531429 -65136576 + AT_rich Low_complexity Low_complexity 1 54 0 244 276 35 0 chr20 1531802 1531860 -65136145 + MER91 DNA MER1_type 131 190 0 186 333 85 0 chr20 1533971 1534100 -65133905 - MIR SINE MIR -95 167 28 213 172 31 7 chr20 1535652 1535687 -65132318 + L2 LINE L2 3218 3295 -18 470 249 24 71 chr20 1536238 1536407 -65131598 + MER5B DNA MER1_type 18 178 0 549 315 65 9 chr20 1536486 1536718 -65131287 - MIR SINE MIR -4 258 14 234 216 93 31 chr20 1536785 1536882 -65131123 - MIR SINE MIR -77 185 83 290 255 195 20 chr20 1537667 1537816 -65130189 + MIR3 SINE MIR 12 186 -22 228 242 0 16 chr20 1538121 1538183 -65129822 + L1MA9 LINE L1 6218 6278 -34 511 241 177 5 chr20 1538187 1538390 -65129615 - MLT1D LTR MaLR -125 380 143 1091 146 18 0 chr20 1538437 1538601 -65129404 + AluSp SINE Alu 1 167 -146 734 275 99 4 chr20 1538619 1538892 -65129113 + L1MC4a LINE L1 5567 5865 -1943 619 221 47 0 chr20 1539118 1539267 -65128738 + MIR3 SINE MIR 45 200 -8 424 278 9 0 chr20 1539643 1539758 -65128247 + L2 LINE L2 3193 3308 -5 213 239 141 0 chr20 1539813 1539884 -65128121 + MIR3 SINE MIR 78 158 -50 1878 161 3 3 chr20 1540499 1540798 -65127207 - AluJb SINE Alu -13 299 1 350 278 176 6 chr20 1540832 1541008 -65126997 - L1MC4 LINE L1 -8 8034 7829 283 286 76 27 chr20 1541184 1541369 -65126636 + MER113 DNA MER1_type? 265 458 -63 1436 170 4 37 chr20 1542015 1542286 -65125719 + L1MA9 LINE L1 5661 5922 -390 995 242 34 18 chr20 1542246 1542573 -65125432 - L1MC5 LINE L1 -178 7783 7452 * 386 241 23 0 chr20 1542610 1542697 -65125308 + LTR16C LTR ERVL 282 370 -121 23 0 0 0 chr20 1542890 1542913 -65125092 + AT_rich Low_complexity Low_complexity 1 23 0 2499 40 0 10 chr20 1543068 1543364 -65124641 + AluY SINE Alu 1 293 -18 423 0 0 0 chr20 1543364 1543411 -65124594 + (CA)n Simple_repeat Simple_repeat 2 48 0 1804 277 95 8 chr20 1543441 1544070 -65123935 - L1MC4a LINE L1 -1866 6011 5328 725 223 10 86 chr20 1544236 1544528 -65123477 - L1MC4a LINE L1 -1094 5121 4852 25 0 0 0 chr20 1544535 1544560 -65123445 + AT_rich Low_complexity Low_complexity 1 25 0 1317 34 0 0 chr20 1544560 1544708 -65123297 - L1PA4 LINE L1 -3 6152 6005 317 158 18 0 chr20 1544712 1544769 -65123236 - L1MC4a LINE L1 -1353 4862 4805 4456 234 61 45 chr20 1544771 1545512 -65122493 - L1MEc LINE L1 -2426 3789 3061 1890 152 0 3 chr20 1545512 1545828 -65122177 + AluJb SINE Alu 1 315 0 4456 234 61 45 chr20 1545828 1547236 -65120769 - L1MEc LINE L1 -3154 3061 1639 656 108 30 175 chr20 1547246 1547412 -65120593 - L1MB3 LINE L1 -7 6176 6035 575 202 29 0 chr20 1547415 1547519 -65120486 - U6 snRNA snRNA 0 107 1 239 176 39 0 chr20 1547522 1547573 -65120432 + Alu SINE Alu 248 300 -2 3945 250 71 57 chr20 1547576 1547677 -65120328 - L1MEc LINE L1 -1710 4505 4407 2176 130 0 0 chr20 1547677 1547977 -65120028 + AluSq SINE Alu 1 300 -13 3945 250 71 57 chr20 1547977 1548297 -65119708 - L1MEc LINE L1 -1808 4407 4093 2405 67 0 10 chr20 1548297 1548597 -65119408 - AluY SINE Alu -14 297 1 3945 250 71 57 chr20 1548597 1550083 -65117922 - L1MEc LINE L1 -2122 4093 11 367 294 268 26 chr20 1550101 1550519 -65117486 - HAL1 LINE L1 -569 1938 1420 660 215 7 171 chr20 1551007 1551190 -65116815 - MIR SINE MIR -26 236 111 1871 138 10 20 chr20 1551190 1551486 -65116519 + AluSx SINE Alu 1 293 -19 660 215 7 171 chr20 1551486 1551576 -65116429 - MIR SINE MIR -151 111 8 23 0 0 0 chr20 1552810 1552833 -65115172 + AT_rich Low_complexity Low_complexity 1 23 0 406 277 7 29 chr20 1552860 1553000 -65115005 + L1ME4a LINE L1 5437 5576 -545 536 256 47 33 chr20 1553249 1553464 -65114541 + L1ME4a LINE L1 5609 5826 -295 294 305 44 66 chr20 1553615 1553693 -65114312 + MIR SINE MIR 2 80 -182 2603 142 66 22 chr20 1553693 1554103 -65113902 + MSTC LTR MaLR 1 428 0 294 305 44 66 chr20 1554103 1554250 -65113755 + MIR SINE MIR 80 222 -40 746 294 4 60 chr20 1554537 1554806 -65113199 - MIR SINE MIR -2 260 7 254 28 0 28 chr20 1555029 1555065 -65112940 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 1784 243 106 43 chr20 1556787 1557342 -65110663 + MLT1G1 LTR MaLR 3 592 -3 1352 288 46 8 chr20 1557396 1557917 -65110088 - L1M4 LINE L1 -3049 3097 2557 1839 227 85 20 chr20 1557923 1558439 -65109566 + MLT1F1 LTR MaLR 1 567 0 760 254 48 20 chr20 1558469 1558717 -65109288 + MLT1D LTR MaLR 207 461 -44 947 185 20 89 chr20 1558717 1559009 -65108996 - L1MB8 LINE L1 -13 6976 6705 * 31319 101 9 10 chr20 1559003 1564701 -65103304 - L1PA7 LINE L1 -4 6465 748 5644 206 58 34 chr20 1564701 1565788 -65102217 - L1MB8 LINE L1 -276 6719 5660 891 161 0 0 chr20 1565788 1565918 -65102087 - FLAM_C SINE Alu -3 130 1 5644 206 58 34 chr20 1565918 1567217 -65100788 - L1MB8 LINE L1 -1335 5660 4055 1582 229 48 66 chr20 1567236 1567966 -65100039 - L1MB8 LINE L1 -4936 1919 1203 693 246 126 0 chr20 1567967 1568158 -65099847 - L1MB8 LINE L1 -6629 230 16 300 227 0 0 chr20 1568171 1568237 -65099768 + MLT1D LTR MaLR 440 505 0 219 186 247 41 chr20 1568466 1568563 -65099442 + MIR3 SINE MIR 47 163 -45 258 264 240 23 chr20 1569121 1569250 -65098755 + MIR SINE MIR 106 262 0 229 328 153 8 chr20 1569855 1569986 -65098019 + MIR SINE MIR 100 249 -13 26 64 0 0 chr20 1572906 1572953 -65095052 + AT_rich Low_complexity Low_complexity 1 47 0 1112 218 21 0 chr20 1573154 1573388 -65094617 + MER106B DNA MER1_type 1 239 -820 2985 116 50 84 chr20 1573393 1573988 -65094017 + L1MA7 LINE L1 5711 6285 -6 2129 213 151 15 chr20 1574094 1574616 -65093389 - MLT1E LTR MaLR 0 593 1 900 182 27 27 chr20 1574616 1574833 -65093172 + MER106B DNA MER1_type 769 985 -74 1965 201 58 14 chr20 1574834 1575266 -65092739 + MLT1C LTR MaLR 1 451 -16 2119 133 0 9 chr20 1575331 1575646 -65092359 + AluJb SINE Alu 1 312 0 231 342 0 25 chr20 1577368 1577447 -65090558 + MIR SINE MIR 20 96 -166 * 271 326 80 11 chr20 1577446 1577496 -65090509 + L2 LINE L2 2263 2308 -1006 204 40 0 0 chr20 1577496 1577521 -65090484 + (TA)n Simple_repeat Simple_repeat 1 25 0 2361 96 0 0 chr20 1577521 1577814 -65090191 - AluSq SINE Alu -20 293 1 271 326 80 11 chr20 1577814 1577937 -65090068 + L2 LINE L2 2307 2449 -865 680 189 58 47 chr20 1577970 1578161 -65089844 - LTR45B LTR ERV1 0 489 297 384 336 58 11 chr20 1578494 1578743 -65089262 + L2 LINE L2 2480 2758 -556 1419 270 31 24 chr20 1578842 1579224 -65088781 - LTR16A LTR ERVL 0 450 66 309 98 0 20 chr20 1579631 1579682 -65088323 - L1MC2 LINE L1 -12 6332 6283 4361 147 51 32 chr20 1579682 1580522 -65087483 - L1MC3 LINE L1 -99 7686 6831 290 235 73 0 chr20 1580696 1580764 -65087241 - L2 LINE L2 0 3313 3241 4732 198 47 32 chr20 1580832 1581549 -65086456 + Tigger6a DNA MER2_type 1 706 -891 2188 117 3 0 chr20 1581549 1581857 -65086148 + AluSp SINE Alu 1 309 -4 4732 198 47 32 chr20 1581857 1581881 -65086124 + Tigger6a DNA MER2_type 706 728 -869 1869 131 109 68 chr20 1581881 1582292 -65085713 - MSTA LTR MaLR 0 428 1 4732 198 47 32 chr20 1582292 1582616 -65085389 + Tigger6a DNA MER2_type 728 1083 0 429 224 201 40 chr20 1582639 1582938 -65085067 - L2 LINE L2 -177 3136 2550 312 246 14 0 chr20 1582969 1583038 -65084967 - MER63 DNA MER1_type -14 1047 978 547 207 16 25 chr20 1583039 1583160 -65084845 - MER63 DNA MER1_type -311 751 6 204 244 35 58 chr20 1583899 1583985 -65084020 - L2 LINE L2 -6 3266 3183 351 152 139 0 chr20 1584886 1584965 -65083040 - MIR SINE MIR -70 192 103 193 286 44 44 chr20 1585240 1585331 -65082674 - L3 LINE CR1 -4 1573 1483 30 0 0 0 chr20 1585422 1585452 -65082553 + AT_rich Low_complexity Low_complexity 1 30 0 502 318 59 28 chr20 1585513 1585868 -65082137 + LTR16A LTR ERVL 71 436 -14 588 323 98 26 chr20 1585879 1586408 -65081597 + HERV16 LTR ERVL 11 577 -4419 487 276 86 0 chr20 1586820 1586983 -65081022 + L1MDb LINE L1 4 180 -6229 1124 261 34 44 chr20 1587048 1587612 -65080393 + L1M4 LINE L1 3027 3584 -2562 229 283 0 0 chr20 1589635 1589688 -65078317 + MIR SINE MIR 204 256 -6 191 153 0 167 chr20 1589775 1589847 -65078158 + L2 LINE L2 3212 3271 -1 421 321 115 10 chr20 1590414 1590623 -65077382 - MIR SINE MIR -4 258 28 216 172 31 7 chr20 1592175 1592210 -65075795 + L2 LINE L2 3218 3295 -18 474 249 24 71 chr20 1592762 1592931 -65075074 + MER5B DNA MER1_type 18 178 0 180 169 200 62 chr20 1592934 1592999 -65075006 - MIR3 SINE MIR -54 154 81 594 315 65 9 chr20 1593010 1593242 -65074763 - MIR SINE MIR -4 258 14 250 216 93 31 chr20 1593309 1593406 -65074599 - MIR SINE MIR -77 185 83 310 267 137 14 chr20 1594204 1594350 -65073655 + MIR SINE MIR 20 183 -79 180 210 126 76 chr20 1594428 1594547 -65073458 + MIR3 SINE MIR 6 130 -78 543 245 172 5 chr20 1594711 1594915 -65073090 - MLT1D LTR MaLR -125 380 143 1124 110 18 0 chr20 1594962 1595126 -65072879 + AluSp SINE Alu 1 167 -146 850 234 106 15 chr20 1595144 1595418 -65072587 + L1MC4a LINE L1 5567 5865 -1943 561 236 49 0 chr20 1595649 1595793 -65072212 + MIR3 SINE MIR 50 200 -8 426 278 9 0 chr20 1596176 1596291 -65071714 + L2 LINE L2 3193 3308 -5 181 250 156 0 chr20 1596353 1596417 -65071588 + MIR3 SINE MIR 85 158 -50 424 267 104 0 chr20 1597111 1597246 -65070759 - MIR SINE MIR -12 250 102 1683 180 0 13 chr20 1597283 1597589 -65070416 - AluJb SINE Alu -10 302 1 548 258 111 29 chr20 1597693 1597972 -65070033 + MLT1I LTR MaLR 53 354 -55 532 165 61 0 chr20 1598007 1598122 -65069883 - MLT1D LTR MaLR -6 499 378 750 256 49 67 chr20 1598133 1598477 -65069528 + L1MA9 LINE L1 5939 6276 -36 284 197 154 124 chr20 1598477 1598711 -65069294 - MLT1D LTR MaLR -123 382 142 3089 237 25 25 chr20 1598711 1599606 -65068399 + L1M4 LINE L1 908 1802 -4582 2124 188 70 0 chr20 1599633 1600032 -65067973 - MER88 LTR ERVL -35 429 3 876 203 13 57 chr20 1600256 1600655 -65067350 + HERVL74 LTR ERVL 1997 2452 -3233 516 226 17 17 chr20 1600653 1600768 -65067237 + HERVL74 LTR ERVL 3526 3640 -2045 * 293 188 75 25 chr20 1600769 1600849 -65067156 + HERVL74 LTR ERVL 3901 3984 -1701 903 231 43 0 chr20 1600851 1601128 -65066877 + L1M4 LINE L1 3960 4248 -2134 5376 184 30 2 chr20 1601227 1603110 -65064895 + L1MA8 LINE L1 4358 6291 0 270 303 0 0 chr20 1603181 1603247 -65064758 + (CATA)n Simple_repeat Simple_repeat 3 68 0 303 180 0 66 chr20 1603252 1603313 -65064692 - L1MC4 LINE L1 -1337 6705 6649 694 261 46 42 chr20 1603598 1603836 -65064169 + MIR SINE MIR 7 245 -17 2225 145 18 8 chr20 1604160 1604546 -65063459 + MLT1B LTR MaLR 1 390 0 221 299 77 8 chr20 1606108 1606225 -65061780 + MIR SINE MIR 91 215 -47 326 343 36 0 chr20 1606454 1606594 -65061411 + MIR SINE MIR 56 200 -62 455 297 84 21 chr20 1607019 1607219 -65060786 - MIR SINE MIR -14 248 36 335 309 44 37 chr20 1607471 1607607 -65060398 + HAL1 LINE L1 881 1017 -1490 2136 161 71 27 chr20 1607731 1608141 -65059864 - MSTA LTR MaLR 0 428 1 8311 172 51 22 chr20 1608159 1609347 -65058658 - MSTA-int LTR MaLR -18 1633 386 1860 130 0 57 chr20 1609347 1609663 -65058342 - AluSg SINE Alu -12 298 1 8311 172 51 22 chr20 1609663 1610060 -65057945 - MSTA-int LTR MaLR -1265 386 2 2379 149 67 5 chr20 1610061 1610464 -65057541 - MSTA LTR MaLR 0 428 1 578 306 78 4 chr20 1611120 1611362 -65056643 + MIR SINE MIR 3 262 0 3308 171 46 5 chr20 1612306 1612915 -65055090 + L1MCa LINE L1 73 706 -5720 3095 236 30 7 chr20 1612922 1613667 -65054338 + Tigger6a DNA MER2_type 322 1083 0 405 296 23 28 chr20 1613684 1613860 -65054145 - L2 LINE L2 -171 3142 2968 261 243 322 0 chr20 1613860 1614012 -65053993 - L2 LINE L2 -580 2734 2534 608 257 50 35 chr20 1614015 1614217 -65053788 - MER63A DNA MER1_type 0 210 6 251 265 112 10 chr20 1615872 1615970 -65052035 - MIR SINE MIR -70 192 85 229 282 39 48 chr20 1616239 1616342 -65051663 - L3 LINE CR1 -4 1573 1472 21 0 0 0 chr20 1616456 1616477 -65051528 + AT_rich Low_complexity Low_complexity 1 21 0 604 307 48 40 chr20 1616524 1616902 -65051103 + LTR16A LTR ERVL 64 444 -6 681 331 96 23 chr20 1616927 1617449 -65050556 + HERV16 LTR ERVL 37 596 -4400 362 290 19 13 chr20 1617887 1618042 -65049963 + L1MDb LINE L1 53 208 -6201 1117 275 38 22 chr20 1618078 1618627 -65049378 + L1M4 LINE L1 3027 3584 -2562 2404 41 7 3 chr20 1619497 1619792 -65048213 - AluY SINE Alu -13 298 3 2528 31 0 0 chr20 1620050 1620344 -65047661 + AluY SINE Alu 2 295 -16 218 171 0 0 chr20 1621053 1621088 -65046917 + L2 LINE L2 3255 3289 -24 197 300 0 0 chr20 1621056 1621106 -65046899 + MIR SINE MIR 213 262 0 * 192 167 0 167 chr20 1621187 1621259 -65046746 + L2 LINE L2 3253 3312 -1 389 292 115 21 chr20 1621853 1622045 -65045960 - MIR SINE MIR -32 230 21 192 281 62 31 chr20 1622268 1622332 -65045673 + MIR SINE MIR 127 192 -70 189 270 0 0 chr20 1623593 1623630 -65044375 + L2 LINE L2 3258 3294 -19 27640 134 15 12 chr20 1623890 1630289 -65037716 - L1PA8 LINE L1 0 6487 4 492 250 24 55 chr20 1630590 1630754 -65037251 + MER5B DNA MER1_type 18 176 -2 666 290 63 8 chr20 1630835 1631073 -65036932 - MIR SINE MIR -4 258 8 256 248 69 30 chr20 1631135 1631236 -65036769 - MIR SINE MIR -78 184 80 201 184 0 0 chr20 1631329 1631380 -65036625 - MIR SINE MIR -65 143 103 2308 86 3 7 chr20 1631921 1632234 -65035771 - AluSp SINE Alu 0 313 1 225 247 27 14 chr20 1632418 1632491 -65035514 + MIR SINE MIR 108 181 -81 681 287 102 4 chr20 1632773 1633038 -65034967 + L1MC4a LINE L1 5567 5857 -1951 385 276 32 73 chr20 1633258 1633422 -65034583 + MIR3 SINE MIR 41 200 -8 360 288 0 9 chr20 1633797 1633908 -65034097 + L2 LINE L2 3193 3302 -11 227 93 23 0 chr20 1633914 1633957 -65034048 + (TAAAA)n Simple_repeat Simple_repeat 1 44 0 244 210 129 0 chr20 1634023 1634085 -65033920 + MIR3 SINE MIR 91 160 -48 234 338 29 29 chr20 1634089 1634225 -65033780 + MIR SINE MIR 20 155 -107 327 205 71 18 chr20 1634802 1634914 -65033091 - MIR SINE MIR -37 225 108 1529 214 20 0 chr20 1634914 1635218 -65032787 - AluJb SINE Alu -2 310 1 312 108 14 27 chr20 1635292 1635366 -65032639 + (TA)n Simple_repeat Simple_repeat 1 73 0 409 241 151 6 chr20 1635406 1635572 -65032433 - MLT1D LTR MaLR -174 331 142 3070 233 24 31 chr20 1635584 1636473 -65031532 + L1M4 LINE L1 921 1802 -4582 1660 194 19 24 chr20 1636481 1636896 -65031109 - MER88 LTR ERVL -5 459 2 647 232 35 84 chr20 1637125 1637526 -65030479 + HERVL74 LTR ERVL 1997 2452 -3233 377 121 17 0 chr20 1637654 1637712 -65030293 + HERVL74 LTR ERVL 3922 3980 -1705 763 228 29 43 chr20 1637719 1638000 -65030005 + L1M4 LINE L1 3960 4236 -2146 342 290 18 63 chr20 1638006 1638227 -65029778 + L2 LINE L2 3103 3313 0 591 298 97 9 chr20 1638480 1638708 -65029297 + MIR SINE MIR 12 259 -3 386 259 0 0 chr20 1639130 1639215 -65028790 + L1MA8 LINE L1 3785 3869 -2277 * 5710 162 25 6 chr20 1639212 1639245 -65028760 + L1MA8 LINE L1 4680 4711 -1580 2240 119 0 3 chr20 1639245 1639548 -65028457 + AluSc SINE Alu 1 302 -7 5710 162 25 6 chr20 1639548 1641098 -65026907 + L1MA8 LINE L1 4711 6291 0 218 231 15 0 chr20 1641170 1641235 -65026770 + (TATATG)n Simple_repeat Simple_repeat 3 68 0 455 321 38 25 chr20 1641487 1641724 -65026281 + MIR SINE MIR 6 245 -17 2008 174 23 23 chr20 1642048 1642142 -65025863 + MLT1B LTR MaLR 1 94 -296 913 69 76 15 chr20 1642142 1642273 -65025732 + MER85 DNA T2_type 1 139 0 2008 174 23 23 chr20 1642273 1642568 -65025437 + MLT1B LTR MaLR 93 390 0 187 277 69 10 chr20 1643881 1643982 -65024023 + MIR SINE MIR 91 197 -65 226 346 46 0 chr20 1644231 1644361 -65023644 + MIR SINE MIR 57 192 -70 553 322 57 12 chr20 1644783 1645028 -65022977 - MIR SINE MIR -1 261 6 595 295 29 19 chr20 1646136 1646343 -65021662 + MIR SINE MIR 19 227 -35 1870 223 47 0 chr20 1647351 1647755 -65020250 + L1MCa LINE L1 75 497 -5929 1345 189 98 7 chr20 1647757 1648064 -65019941 + Tigger6 DNA MER2_type 1257 1591 -6 226 328 6 71 chr20 1648090 1648273 -65019732 - L2 LINE L2 -175 3138 2968 2494 49 0 23 chr20 1648319 1648623 -65019382 + AluY SINE Alu 1 297 -14 297 289 117 22 chr20 1648646 1648743 -65019262 - L2 LINE L2 -679 2635 2549 585 303 24 14 chr20 1648743 1648951 -65019054 - MER63A DNA MER1_type 0 210 1 297 289 117 22 chr20 1648951 1649033 -65018972 - L2 LINE L2 -765 2549 2439 2385 165 48 10 chr20 1649157 1649569 -65018436 - MSTB1 LTR MaLR 0 432 5 380 82 0 0 chr20 1650951 1651000 -65017005 + Tigger3(Golem) DNA MER2_type 2111 2159 -870 332 223 27 18 chr20 1651005 1651117 -65016888 - L1MC/D LINE L1 -2377 5431 5319 4224 130 24 110 chr20 1651199 1651648 -65016357 + Tigger3(Golem) DNA MER2_type 2147 2633 -396 1618 181 63 13 chr20 1651648 1651951 -65016054 + 7SLRNA srpRNA srpRNA 2 319 -1 4224 130 24 110 chr20 1651951 1652205 -65015800 + Tigger3(Golem) DNA MER2_type 2633 2907 -122 1536 172 60 4 chr20 1652205 1652473 -65015532 - AluJb SINE Alu -18 294 12 4224 130 24 110 chr20 1652473 1652679 -65015326 + Tigger3(Golem) DNA MER2_type 2907 2972 -57 4078 109 22 12 chr20 1652679 1653275 -65014730 - LTR43 LTR ERV1 0 602 1 4224 130 24 110 chr20 1653275 1653326 -65014679 + Tigger3(Golem) DNA MER2_type 2972 3026 -3 1005 122 6 17 chr20 1653405 1653586 -65014419 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2098 118 0 4 chr20 1653590 1653869 -65014136 - AluSg SINE Alu -32 278 1 271 279 15 0 chr20 1654407 1654475 -65013530 + MER91 DNA MER1_type 122 190 0 192 149 0 0 chr20 1655915 1655962 -65012043 + (CTAG)n Simple_repeat Simple_repeat 3 49 0 3584 112 8 4 chr20 1656806 1657315 -65010690 - MER9 LTR ERVK 0 511 1 207 0 0 0 chr20 1658029 1658052 -65009953 + (TTG)n Simple_repeat Simple_repeat 2 24 0 195 216 0 0 chr20 1658731 1658768 -65009237 + L2 LINE L2 3258 3294 -19 435 278 18 77 chr20 1659393 1659562 -65008443 + MER5B DNA MER1_type 18 176 -2 518 322 52 4 chr20 1659650 1659883 -65008122 - MIR SINE MIR -11 251 8 242 208 50 50 chr20 1659945 1660046 -65007959 - MIR SINE MIR -78 184 84 258 108 0 0 chr20 1660139 1660187 -65007818 - MIR SINE MIR -65 143 103 1826 72 0 24 chr20 1660942 1661191 -65006814 + MER75B DNA T2_type 1 243 0 686 284 108 22 chr20 1661512 1661780 -65006225 + L1MC4a LINE L1 5567 5857 -1951 339 283 55 28 chr20 1662252 1662397 -65005608 - MIR SINE MIR -12 250 102 737 306 79 6 chr20 1662548 1662865 -65005140 + MLT1I LTR MaLR 21 360 -49 481 232 16 0 chr20 1662876 1663001 -65005004 - MLT1D LTR MaLR -1 504 378 1037 267 20 26 chr20 1663002 1663347 -65004658 + L1MA9 LINE L1 5936 6278 -34 471 228 192 31 chr20 1663357 1663550 -65004455 - MLT1D LTR MaLR -139 366 143 2413 243 34 32 chr20 1663551 1664321 -65003684 + L1M4 LINE L1 908 1678 -4706 450 259 18 0 chr20 1664445 1664557 -65003448 + L1M4 LINE L1 1689 1802 -4582 2291 196 26 18 chr20 1664565 1665019 -65002986 - MER88 LTR ERVL -5 459 2 733 213 26 0 chr20 1665247 1665402 -65002603 + HERVL74 LTR ERVL 1997 2155 -3530 750 223 11 17 chr20 1665459 1665634 -65002371 + HERVL74 LTR ERVL 2279 2452 -3233 437 208 48 32 chr20 1665625 1665750 -65002255 + HERVL74 LTR ERVL 3517 3643 -2042 * 355 156 26 26 chr20 1665751 1665828 -65002177 + HERVL74 LTR ERVL 3908 3984 -1701 826 239 40 0 chr20 1665831 1666107 -65001898 + L1M4 LINE L1 3961 4247 -2135 371 285 16 59 chr20 1666147 1666333 -65001672 + L2 LINE L2 3136 3313 0 374 279 90 69 chr20 1666595 1666828 -65001177 + MIR SINE MIR 12 249 -13 1860 162 3 16 chr20 1666837 1667151 -65000854 + AluSx SINE Alu 1 310 -2 1008 229 0 8 chr20 1667601 1667837 -65000168 + L1MA8 LINE L1 3790 4023 -2123 * 1607 204 42 0 chr20 1667836 1668169 -64999836 + L1MA8 LINE L1 4824 5170 -976 5548 154 34 13 chr20 1668210 1668993 -64999012 + L1MA8 LINE L1 5167 5981 -310 2176 93 0 4 chr20 1668993 1669272 -64998733 + AluSq SINE Alu 21 298 -15 5548 154 34 13 chr20 1669272 1669590 -64998415 + L1MA8 LINE L1 5981 6291 0 207 232 0 0 chr20 1669680 1669736 -64998269 + (TA)n Simple_repeat Simple_repeat 1 56 0 553 283 33 53 chr20 1669972 1670216 -64997789 + MIR SINE MIR 7 245 -17 2125 164 19 5 chr20 1670541 1670918 -64997087 + MLT1B LTR MaLR 1 382 -8 297 262 10 10 chr20 1672917 1673013 -64994992 + MIR SINE MIR 66 160 -62 349 333 14 7 chr20 1673495 1673642 -64994363 - MIR SINE MIR -36 226 79 2499 137 62 5 chr20 1674200 1674603 -64993402 - MSTA LTR MaLR -2 426 1 556 296 54 10 chr20 1675268 1675471 -64992534 + MIR SINE MIR 8 219 -43 451 232 8 16 chr20 1675797 1675922 -64992083 + Tigger6 DNA MER2_type 1090 1213 -384 6587 114 48 0 chr20 1675922 1676871 -64991134 + L1P3 LINE L1 23 1017 -5444 7210 53 6 1 chr20 1676871 1678200 -64989805 + L1PA7 LINE L1 4820 6154 0 1799 200 63 0 chr20 1678209 1678604 -64989401 + Tigger6 DNA MER2_type 1178 1597 0 597 224 104 27 chr20 1678940 1679123 -64988882 - MER63A DNA MER1_type 0 210 14 195 197 15 61 chr20 1679159 1679225 -64988780 - L2 LINE L2 -813 2501 2439 252 253 24 24 chr20 1680805 1680888 -64987117 + MIR SINE MIR 108 190 -72 687 297 82 0 chr20 1681187 1681456 -64986549 + L1MC4a LINE L1 5567 5857 -1951 498 214 91 6 chr20 1681661 1681828 -64986177 + MIR3 SINE MIR 34 200 -8 279 342 0 33 chr20 1682216 1682336 -64985669 + L2 LINE L2 3193 3308 -5 196 368 30 54 chr20 1682440 1682606 -64985399 + MIR3 SINE MIR 2 163 -45 381 261 108 0 chr20 1683149 1683279 -64984726 - MIR SINE MIR -17 245 102 676 262 110 38 chr20 1683345 1683394 -64984611 + MLT1I LTR MaLR 21 65 -344 2500 75 3 0 chr20 1683394 1683700 -64984305 - AluSp SINE Alu -6 307 1 676 262 110 38 chr20 1683700 1683967 -64984038 + MLT1I LTR MaLR 65 360 -49 616 180 25 0 chr20 1683994 1684116 -64983889 - MLT1D LTR MaLR -4 501 377 968 271 69 10 chr20 1684126 1684331 -64983674 + L1MA9 LINE L1 5943 6173 -139 396 0 0 0 chr20 1684331 1684375 -64983630 + (CA)n Simple_repeat Simple_repeat 2 45 0 968 271 69 10 chr20 1684375 1684475 -64983530 + L1MA9 LINE L1 6173 6266 -46 2985 241 43 30 chr20 1684629 1685514 -64982491 + L1M4 LINE L1 907 1802 -4582 1787 110 0 4 chr20 1685516 1685752 -64982253 + AluSc SINE Alu 1 235 -74 766 81 0 0 chr20 1685757 1685856 -64982149 + AluSc SINE Alu 196 294 -15 2372 195 31 7 chr20 1685867 1686314 -64981691 - MER88 LTR ERVL -5 459 2 996 215 8 46 chr20 1686526 1686935 -64981070 + HERVL74 LTR ERVL 1906 2451 -3234 565 149 18 26 chr20 1686937 1687051 -64980954 + HERVL74 LTR ERVL 3529 3641 -2044 367 154 92 0 chr20 1687052 1687117 -64980888 + HERVL74 LTR ERVL 3901 3971 -1714 975 209 45 8 chr20 1687125 1687393 -64980612 + L1M4 LINE L1 3960 4237 -2145 375 280 6 57 chr20 1687409 1687584 -64980421 + L2 LINE L2 3148 3313 0 486 301 91 32 chr20 1687861 1688080 -64979925 + MIR SINE MIR 31 262 0 6852 190 42 4 chr20 1688474 1690867 -64977138 + L1MA8 LINE L1 3785 6269 -22 28 71 0 0 chr20 1690889 1690945 -64977060 + AT_rich Low_complexity Low_complexity 1 56 0 240 302 0 0 chr20 1690964 1691027 -64976978 + (CA)n Simple_repeat Simple_repeat 2 64 0 1924 143 7 30 chr20 1691089 1691390 -64976615 - AluSx SINE Alu -18 294 1 331 320 66 17 chr20 1691595 1691776 -64976229 + MIR SINE MIR 56 245 -17 1773 147 55 50 chr20 1692084 1692362 -64975643 + MLT1B LTR MaLR 1 283 -107 2186 103 7 3 chr20 1692362 1692693 -64975312 + AluSx SINE Alu 1 312 0 1773 147 55 50 chr20 1692693 1692794 -64975211 + MLT1B LTR MaLR 283 382 -8 182 218 127 0 chr20 1694371 1694426 -64973579 + MIR SINE MIR 91 152 -110 280 319 43 0 chr20 1694754 1694892 -64973113 + MIR SINE MIR 57 200 -62 23 0 0 0 chr20 1695226 1695249 -64972756 + AT_rich Low_complexity Low_complexity 1 23 0 563 315 68 5 chr20 1695313 1695535 -64972470 - MIR SINE MIR -9 253 18 2592 112 16 0 chr20 1695573 1695940 -64972065 - THE1C LTR MaLR -2 373 1 4281 256 27 20 chr20 1696574 1698784 -64969221 + L1PBa LINE L1 3 1644 -5219 14301 209 16 16 chr20 1698785 1703219 -64964786 + L1PBb LINE L1 787 5290 -913 368 289 22 15 chr20 1703228 1703363 -64964642 - MIR SINE MIR -120 142 7 237 255 69 29 chr20 1703423 1703525 -64964480 - MIR SINE MIR -77 185 80 234 330 50 0 chr20 1703579 1703679 -64964326 - MIR SINE MIR -78 184 80 229 143 0 0 chr20 1703776 1703824 -64964181 - MIR SINE MIR -66 142 103 4990 89 24 1 chr20 1704194 1704870 -64963135 - LTR8 LTR ERV1 0 691 1 204 233 51 6 chr20 1705242 1705335 -64962670 + MIR SINE MIR 97 190 -62 618 261 109 39 chr20 1705650 1705907 -64962098 + L1MC4a LINE L1 5577 5851 -1957 1975 134 0 0 chr20 1705934 1706245 -64961760 + AluSx SINE Alu 9 319 0 368 291 47 14 chr20 1706441 1706589 -64961416 + MIR3 SINE MIR 46 198 -10 336 336 0 0 chr20 1706962 1707078 -64960927 + L2 LINE L2 3193 3308 -5 202 280 133 0 chr20 1707134 1707209 -64960796 + MIR3 SINE MIR 78 162 -46 284 313 97 0 chr20 1707869 1708013 -64959992 - MIR SINE MIR -3 259 102 716 289 88 19 chr20 1708079 1708397 -64959608 + MLT1I LTR MaLR 21 360 -49 390 264 8 8 chr20 1708422 1708547 -64959458 - MLT1D LTR MaLR -3 502 378 861 270 55 21 chr20 1708555 1708885 -64959120 + L1MA9 LINE L1 5936 6276 -36 505 235 141 6 chr20 1708919 1709089 -64958916 - MLT1D LTR MaLR -171 334 142 3580 213 23 36 chr20 1709089 1709133 -64958872 + L1M4c LINE L1 908 951 -5433 2184 114 0 3 chr20 1709133 1709422 -64958583 + AluSq SINE Alu 1 288 -25 3580 213 23 36 chr20 1709422 1710283 -64957722 + L1M4c LINE L1 951 1801 -4583 2353 217 22 0 chr20 1710295 1710742 -64957263 - MER88 LTR ERVL -7 457 1 2128 157 28 0 chr20 1711244 1711600 -64956405 - MER47A DNA MER2_type 0 366 1 1187 181 0 35 chr20 1711990 1712216 -64955789 + AluJb SINE Alu 86 303 -9 255 61 0 0 chr20 1712391 1712424 -64955581 + (A)n Simple_repeat Simple_repeat 1 33 0 2157 121 114 24 chr20 1712526 1712939 -64955066 - LTR7 LTR ERV1 0 450 1 3802 100 11 16 chr20 1712939 1713499 -64954506 - HERVH LTR ERV1 0 7713 7157 1652 149 8 0 chr20 1713492 1713760 -64954245 - HERVH LTR ERV1 -1697 6016 5747 * 6314 132 6 3 chr20 1713760 1714921 -64953084 - HERVH LTR ERV1 -2287 4888 3811 2744 166 0 0 chr20 1714920 1715367 -64952638 - HERVH LTR ERV1 -4127 3586 3140 * 9676 163 19 36 chr20 1715346 1718425 -64949580 - HERVH LTR ERV1 -3622 2907 1 2379 134 53 14 chr20 1718425 1718858 -64949147 - LTR7 LTR ERV1 0 450 1 1459 217 51 58 chr20 1718974 1719408 -64948597 + LTR56 LTR ERV1 13 443 -2 267 265 12 36 chr20 1719963 1720046 -64947959 + MER4B-int LTR ERV1 614 694 -6064 586 68 0 0 chr20 1720174 1720248 -64947757 - MSTA LTR MaLR 0 428 355 2177 136 0 0 chr20 1720249 1720559 -64947446 + AluSx SINE Alu 1 310 -2 678 88 115 9 chr20 1720585 1720698 -64947307 + L1MC1 LINE L1 5994 6118 -215 543 116 23 0 chr20 1720698 1720782 -64947223 + L1MC2 LINE L1 6252 6339 -5 216 0 0 0 chr20 1720786 1720810 -64947195 + (TG)n Simple_repeat Simple_repeat 2 25 0 689 213 0 0 chr20 1720825 1720952 -64947053 + FLAM_A SINE Alu 2 128 -5 274 290 140 0 chr20 1721740 1721840 -64946165 + L2 LINE L2 3194 3307 -6 2207 102 9 22 chr20 1721943 1722258 -64945747 - AluY SINE Alu 0 311 1 1256 192 5 5 chr20 1722298 1722522 -64945483 + AluJo SINE Alu 52 275 -37 2245 106 7 0 chr20 1722883 1723167 -64944838 + AluSx SINE Alu 6 291 -21 330 286 62 36 chr20 1723326 1723518 -64944487 - L1ME LINE L1 -599 5563 5367 2102 118 41 54 chr20 1723537 1723590 -64944415 + MSTB1 LTR MaLR 1 53 -379 2492 115 25 3 chr20 1723590 1723946 -64944059 + THE1B LTR MaLR 1 364 0 2102 118 41 54 chr20 1723946 1724282 -64943723 + MSTB1 LTR MaLR 53 385 -47 282 314 39 0 chr20 1724645 1724747 -64943258 + MIR SINE MIR 91 196 -66 247 191 0 0 chr20 1725031 1725078 -64942927 - MER94 DNA DNA -11 123 77 765 183 13 12 chr20 1726803 1727042 -64940963 + CT-rich Low_complexity Low_complexity 1 239 0 17179 28 0 0 chr20 1727557 1730321 -64937684 + L1PA2 LINE L1 3387 6155 0 22 0 0 0 chr20 1730321 1730343 -64937662 + AT_rich Low_complexity Low_complexity 1 22 0 1514 231 61 20 chr20 1731071 1731512 -64936493 + L1ME2 LINE L1 5698 6156 -8 485 190 0 0 chr20 1731716 1731795 -64936210 - AluJ/FRAM SINE Alu -16 296 218 718 282 50 0 chr20 1733003 1733205 -64934800 + L2 LINE L2 2331 2542 -772 967 345 50 23 chr20 1733208 1733774 -64934231 + L1MD2 LINE L1 17 597 -5826 1029 243 82 57 chr20 1733866 1734269 -64933736 + L1MD2 LINE L1 821 1233 -5190 2478 161 13 12 chr20 1734274 1735013 -64932992 + L1P4 LINE L1 4924 5660 -505 783 204 132 14 chr20 1735009 1735409 -64932596 + L1M4 LINE L1 4735 5087 -1091 * 427 33 33 0 chr20 1735409 1735470 -64932535 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 783 204 132 14 chr20 1735470 1735781 -64932224 + L1M4 LINE L1 5087 5686 -492 231 36 0 0 chr20 1735831 1735859 -64932146 + (CA)n Simple_repeat Simple_repeat 2 29 0 550 210 25 68 chr20 1735876 1735991 -64932014 + L1MD2 LINE L1 3764 3872 -3069 2066 138 21 0 chr20 1735991 1736282 -64931723 + AluSx SINE Alu 1 297 -15 550 210 25 68 chr20 1736282 1736328 -64931677 + L1MD2 LINE L1 3872 3918 -3023 612 263 16 10 chr20 1736328 1736522 -64931483 + L1MD2 LINE L1 4612 4806 -2135 2070 221 5 0 chr20 1736543 1736936 -64931069 + L1 LINE L1 1 395 -6814 1603 176 13 3 chr20 1736938 1737437 -64930568 + L1 LINE L1 2955 3458 -3750 923 213 0 10 chr20 1737427 1737629 -64930376 + L1 LINE L1 5824 6023 -1185 * 11040 151 26 12 chr20 1737631 1738724 -64929281 + L1MA5 LINE L1 3291 4367 -1933 234 0 0 0 chr20 1738724 1738750 -64929255 + (TAAAA)n Simple_repeat Simple_repeat 2 27 0 11040 151 26 12 chr20 1738750 1740612 -64927393 + L1MA5 LINE L1 4367 6294 -6 448 184 46 55 chr20 1740623 1740732 -64927273 + L1MD2 LINE L1 4794 4901 -2040 205 237 34 17 chr20 1741256 1741315 -64926690 + MIR3 SINE MIR 130 189 -19 2445 74 0 7 chr20 1741716 1742015 -64925990 - AluY SINE Alu -14 297 1 3813 216 56 53 chr20 1744255 1744492 -64923513 + L1MD2 LINE L1 4891 5126 -1815 2090 133 0 0 chr20 1744492 1744785 -64923220 - AluSx SINE Alu -19 293 1 3813 216 56 53 chr20 1744785 1744967 -64923038 + L1MD2 LINE L1 5126 5306 -1635 3512 138 0 77 chr20 1744967 1745567 -64922438 - MLT2B3 LTR ERVL 0 554 1 3813 216 56 53 chr20 1745567 1746380 -64921625 + L1MD2 LINE L1 5306 6127 -814 3126 192 79 5 chr20 1746380 1747111 -64920894 - MER21B LTR ERV1 0 863 1 3474 194 45 30 chr20 1747111 1747888 -64920117 + L1MD2 LINE L1 6117 6905 -249 2287 118 0 0 chr20 1747949 1748254 -64919751 + AluSx SINE Alu 1 305 -7 781 261 65 50 chr20 1748256 1748639 -64919366 + HAL1 LINE L1 2118 2506 -1 1987 121 80 0 chr20 1748685 1748974 -64919031 + AluSx SINE Alu 1 312 0 613 269 114 35 chr20 1748979 1749469 -64918536 + L1M4 LINE L1 4225 4753 -1393 4142 139 38 17 chr20 1749506 1750198 -64917807 - Tigger1 DNA MER2_type -1695 723 18 1049 142 0 7 chr20 1750431 1750586 -64917419 + AluSg/x SINE Alu 129 282 -30 302 149 95 25 chr20 1750586 1750665 -64917340 - L1M4 LINE L1 -1063 5083 5000 861 256 60 34 chr20 1750788 1751139 -64916866 - L1MEc LINE L1 -4387 2009 1650 311 169 46 0 chr20 1751246 1751311 -64916694 + L1MC4 LINE L1 1996 2063 -4363 * 349 231 0 22 chr20 1751293 1751399 -64916606 + L1MC4 LINE L1 1996 6983 -1339 1038 148 0 0 chr20 1751399 1751575 -64916430 + (TA)n Simple_repeat Simple_repeat 1 176 0 327 301 60 23 chr20 1751725 1751991 -64916014 + L1ME3A LINE L1 5681 5956 -214 329 303 40 0 chr20 1752662 1752761 -64915244 - L2 LINE L2 0 3313 3211 261 262 33 66 chr20 1753661 1753783 -64914222 - MIR SINE MIR -71 191 74 416 246 26 0 chr20 1753871 1753985 -64914020 - MIR SINE MIR -56 206 90 1038 88 0 0 chr20 1754929 1755076 -64912929 + (TGGA)n Simple_repeat Simple_repeat 1 147 0 258 278 100 0 chr20 1755251 1755341 -64912664 - MIR SINE MIR -121 141 43 306 286 11 33 chr20 1755568 1755659 -64912346 + MIR SINE MIR 25 113 -95 201 314 14 0 chr20 1756235 1756305 -64911700 - MIR SINE MIR -38 224 154 30 69 0 0 chr20 1756422 1756480 -64911525 + AT_rich Low_complexity Low_complexity 1 58 0 399 294 55 31 chr20 1757111 1757366 -64910639 + LTR16C LTR ERVL 231 491 0 340 301 9 26 chr20 1757571 1757684 -64910321 - MIR SINE MIR -106 156 46 319 270 144 0 chr20 1757646 1757757 -64910248 + MIR3 SINE MIR 13 139 -69 * 448 258 12 78 chr20 1758304 1758471 -64909534 - MIR SINE MIR 0 262 107 807 208 35 0 chr20 1759101 1759274 -64908731 - MIR SINE MIR -67 195 17 383 244 148 17 chr20 1759369 1759484 -64908521 + MIR SINE MIR 16 145 -117 5692 90 5 31 chr20 1759627 1760402 -64907603 - L1PA10 LINE L1 -1 6167 5413 359 251 95 56 chr20 1760491 1760657 -64907348 - MIR SINE MIR -68 140 16 2191 113 7 0 chr20 1760912 1761204 -64906801 + AluSq SINE Alu 1 294 -19 195 295 13 51 chr20 1761547 1761625 -64906380 + MIR SINE MIR 20 94 -168 1548 144 22 0 chr20 1762777 1763100 -64904905 + L1P4 LINE L1 5173 5501 -664 369 96 72 36 chr20 1763100 1763180 -64904825 + L1PA13 LINE L1 6074 6159 -4 259 167 14 28 chr20 1763227 1763299 -64904706 + GA-rich Low_complexity Low_complexity 6 76 0 460 270 81 0 chr20 1764391 1764502 -64903503 + L2 LINE L2 3192 3311 -2 702 244 60 44 chr20 1764578 1764828 -64903177 - MIR SINE MIR 0 262 9 1077 280 105 37 chr20 1765484 1766199 -64901806 - L2 LINE L2 -219 3094 2334 229 288 140 59 chr20 1766296 1766532 -64901473 - L3 LINE CR1 -113 1464 1210 189 393 33 8 chr20 1766527 1766649 -64901356 - L2 LINE L2 -25 3288 3164 * 430 267 30 30 chr20 1766841 1766976 -64901029 - MIR SINE MIR -108 154 20 257 135 19 0 chr20 1767016 1767068 -64900937 + CT-rich Low_complexity Low_complexity 2 54 0 194 259 24 59 chr20 1767300 1767385 -64900620 + MIR3 SINE MIR 106 187 -21 234 282 150 32 chr20 1768153 1768373 -64899632 + L2 LINE L2 3047 3292 -21 230 254 0 18 chr20 1768980 1769035 -64898970 + (CA)n Simple_repeat Simple_repeat 1 54 0 478 191 9 57 chr20 1769406 1769511 -64898494 - MER3 DNA MER1_type -81 128 29 286 238 63 0 chr20 1769620 1769683 -64898322 + L2 LINE L2 3138 3204 -68 399 98 0 0 chr20 1769707 1769768 -64898237 + (TGGA)n Simple_repeat Simple_repeat 1 61 0 2303 97 3 0 chr20 1770309 1770607 -64897398 + AluSg SINE Alu 1 299 -11 259 314 7 51 chr20 1770739 1770876 -64897129 + L2 LINE L2 3180 3310 -3 543 291 214 8 chr20 1770889 1771281 -64896724 - L2 LINE L2 0 3313 2841 404 291 80 11 chr20 1771637 1771812 -64896193 + MIR3 SINE MIR 6 192 -16 433 237 21 0 chr20 1771898 1771995 -64896010 + MER45 DNA AcHobo 24 122 -56 792 248 53 46 chr20 1772563 1772845 -64895160 + L2 LINE L2 2989 3272 0 463 268 101 22 chr20 1773473 1773652 -64894353 + L3 LINE CR1 1308 1500 -77 340 272 26 26 chr20 1773664 1773778 -64894227 - MER112 DNA MER1_type 0 260 147 247 282 13 13 chr20 1773778 1773856 -64894149 + GA-rich Low_complexity Low_complexity 3 80 0 245 241 0 76 chr20 1773942 1774021 -64893984 - MER112 DNA MER1_type -175 85 13 267 365 149 14 chr20 1774141 1774289 -64893716 - L2 LINE L2 -1 3271 3104 247 308 105 49 chr20 1774355 1774498 -64893507 - MIR SINE MIR -110 152 2 184 250 37 128 chr20 1774504 1774668 -64893337 - L2 LINE L2 -161 3111 2963 359 342 0 0 chr20 1774728 1774842 -64893163 + MIR SINE MIR 40 153 -109 731 270 42 0 chr20 1774936 1775125 -64892880 + MIR SINE MIR 66 262 0 236 213 37 111 chr20 1775170 1775278 -64892727 - L2 LINE L2 0 3272 3173 2130 242 89 78 chr20 1775624 1776578 -64891427 + L1MC3 LINE L1 1 965 -5080 1201 135 6 0 chr20 1776581 1776759 -64891246 + MER46B DNA MER2_type 2 55 -181 740 182 0 0 chr20 1776766 1776876 -64891129 + FLAM_A SINE Alu 8 117 -25 315 0 0 0 chr20 1776886 1776921 -64891084 + (CA)n Simple_repeat Simple_repeat 2 36 0 2412 106 48 34 chr20 1776990 1777348 -64890657 - THE1B LTR MaLR -1 363 1 1170 155 11 0 chr20 1777349 1777536 -64890469 + MER46B DNA MER2_type 48 236 0 1146 184 108 54 chr20 1777534 1777850 -64890155 - MLT1D LTR MaLR 0 505 173 * 2981 184 50 35 chr20 1777857 1779071 -64888934 + L1MB4 LINE L1 4693 5930 -250 1508 170 10 35 chr20 1779078 1779367 -64888638 + L1MB7 LINE L1 5557 5838 -346 357 191 0 0 chr20 1779367 1779430 -64888575 + FLAM_A SINE Alu 4 66 -67 1642 163 15 45 chr20 1779434 1779674 -64888331 + L1MB7 LINE L1 5844 6073 -111 1973 113 63 14 chr20 1779674 1779958 -64888047 - AluSx SINE Alu -13 299 2 1642 163 15 45 chr20 1779958 1780049 -64887956 + L1MB7 LINE L1 6073 6165 -19 8512 242 62 25 chr20 1780064 1782360 -64885645 + L1MC3 LINE L1 2713 4922 -1642 1492 138 0 9 chr20 1782360 1782585 -64885420 + AluSg/x SINE Alu 87 309 -3 8512 242 62 25 chr20 1782585 1783068 -64884937 + L1MC3 LINE L1 4922 5386 -1178 1734 136 0 19 chr20 1783068 1783326 -64884679 + AluSx SINE Alu 1 253 -59 1532 185 35 0 chr20 1783328 1783588 -64884417 + AluJo SINE Alu 42 310 -2 8512 242 62 25 chr20 1783588 1783647 -64884358 + L1MC3 LINE L1 5386 5678 -886 1737 172 42 20 chr20 1783678 1784032 -64883973 - MLT2B1 LTR ERVL -158 362 1 7979 166 51 73 chr20 1784039 1785014 -64882991 + L1MC3 LINE L1 5676 6588 -1615 2297 83 20 0 chr20 1785014 1785315 -64882690 + AluSp SINE Alu 1 307 -6 7979 166 51 73 chr20 1785315 1786290 -64881715 + L1MC3 LINE L1 6588 7583 -620 587 205 41 53 chr20 1786296 1786467 -64881538 - L1MC3 LINE L1 -396 7389 7221 616 249 74 21 chr20 1786640 1786829 -64881176 + MLT1H LTR MaLR 20 218 -331 353 229 132 79 chr20 1786870 1787097 -64880908 + MLT1H LTR MaLR 348 586 -9 296 293 30 28 chr20 1787119 1787559 -64880446 + L1MC4a LINE L1 5676 6023 -141 505 299 14 14 chr20 1788251 1788395 -64879610 - MIR3 SINE MIR -62 146 3 187 54 54 0 chr20 1788647 1788684 -64879321 + (CTCCG)n Simple_repeat Simple_repeat 5 43 0 23 54 0 0 chr20 1788689 1788726 -64879279 + GC_rich Low_complexity Low_complexity 1 37 0 240 269 90 0 chr20 1789452 1789530 -64878475 - MIR SINE MIR -1 261 177 371 252 167 15 chr20 1789863 1790132 -64877873 - L2 LINE L2 -252 3061 2751 202 318 0 30 chr20 1790414 1790480 -64877525 + L2 LINE L2 3172 3235 -37 1424 247 116 54 chr20 1790499 1791050 -64876955 + MER115 DNA AcHobo 59 643 -50 356 280 48 71 chr20 1791138 1791306 -64876699 - MIR SINE MIR -73 189 26 941 241 55 56 chr20 1791550 1791672 -64876333 - MLT1J LTR MaLR -55 456 335 1699 244 86 30 chr20 1791672 1792196 -64875809 - MLT1H1 LTR MaLR -2 553 1 941 241 55 56 chr20 1792196 1792484 -64875521 - MLT1J LTR MaLR -176 335 3 183 42 0 0 chr20 1792496 1792520 -64875485 + (TTG)n Simple_repeat Simple_repeat 1 24 0 566 274 109 10 chr20 1792719 1792920 -64875085 - MIR SINE MIR -24 238 18 190 246 35 35 chr20 1793401 1793458 -64874547 + MIR SINE MIR 108 164 -98 495 276 78 43 chr20 1793736 1793968 -64874037 + MIR SINE MIR 10 249 -13 499 278 101 44 chr20 1793977 1794225 -64873780 - MIR SINE MIR 0 262 1 1589 291 92 15 chr20 1794992 1795979 -64872026 + L2 LINE L2 2246 3312 -1 262 288 8 72 chr20 1796693 1796818 -64871187 - MER5B DNA MER1_type -33 145 29 576 189 101 63 chr20 1797542 1797701 -64870304 + MIR SINE MIR 28 192 -70 767 180 19 66 chr20 1797822 1797991 -64870014 - L2 LINE L2 -1 3312 3153 2144 89 30 43 chr20 1797991 1798294 -64869711 + AluSx SINE Alu 1 299 -13 767 180 19 66 chr20 1798294 1798335 -64869670 - L2 LINE L2 -160 3153 3112 281 305 21 21 chr20 1798346 1798441 -64869564 + MIR SINE MIR 20 114 -148 1202 235 94 27 chr20 1798487 1798518 -64869487 - L2 LINE L2 -3 3310 3283 1940 137 3 51 chr20 1798518 1798831 -64869174 + AluSx SINE Alu 1 298 -14 1202 235 94 27 chr20 1798831 1799203 -64868802 - L2 LINE L2 -30 3283 2880 369 281 89 98 chr20 1799764 1800201 -64867804 + L2 LINE L2 2837 3269 -3 1143 123 0 0 chr20 1800211 1800431 -64867574 + (TGGA)n Simple_repeat Simple_repeat 1 220 0 726 281 142 8 chr20 1800472 1800924 -64867081 + L2 LINE L2 2566 3078 -235 527 270 40 72 chr20 1801508 1801786 -64866219 + L2 LINE L2 3025 3293 -20 401 310 64 18 chr20 1801861 1802032 -64865973 + MER117 DNA MER1_type 4 182 -15 408 349 32 32 chr20 1803052 1803270 -64864735 - MIR SINE MIR -37 225 8 217 252 32 58 chr20 1803500 1803655 -64864350 + (TCTCTG)n Simple_repeat Simple_repeat 6 156 0 * 224 325 8 8 chr20 1803555 1803672 -64864333 + CT-rich Low_complexity Low_complexity 1 117 0 381 86 0 0 chr20 1803686 1803744 -64864261 + (TC)n Simple_repeat Simple_repeat 1 58 0 294 231 19 28 chr20 1803830 1803938 -64864067 + CT-rich Low_complexity Low_complexity 2 108 0 642 264 3 6 chr20 1803966 1804290 -64863715 + CT-rich Low_complexity Low_complexity 1 322 0 643 319 31 4 chr20 1805890 1806119 -64861886 - MIR SINE MIR -12 250 16 221 319 228 12 chr20 1806569 1806932 -64861073 + L2 LINE L2 2596 3056 -257 370 288 59 31 chr20 1807057 1807279 -64860726 + L1M4 LINE L1 14 241 -6301 1285 223 204 29 chr20 1807539 1807730 -64860275 + L1M4 LINE L1 800 956 -5690 188 35 35 0 chr20 1807730 1807759 -64860246 + (CAA)n Simple_repeat Simple_repeat 1 30 0 1285 223 204 29 chr20 1807759 1808088 -64859917 + L1M4 LINE L1 956 1411 -5235 940 231 89 28 chr20 1808098 1808423 -64859582 + L1M4 LINE L1 2630 2974 -3670 216 333 48 12 chr20 1808454 1808538 -64859467 + L2 LINE L2 3204 3290 -23 323 311 9 0 chr20 1808813 1808919 -64859086 - MIR3 SINE MIR -39 169 63 259 305 12 0 chr20 1809121 1809203 -64858802 - MIR SINE MIR -70 192 110 185 227 45 45 chr20 1809635 1809701 -64858304 - MIR SINE MIR -57 151 86 274 270 101 20 chr20 1810421 1810569 -64857436 - MIR3 SINE MIR -3 205 46 408 300 64 53 chr20 1811456 1811813 -64856192 + L2 LINE L2 2826 3186 -127 181 311 16 0 chr20 1811820 1811881 -64856124 + MER5B DNA MER1_type 4 65 -113 2032 138 0 25 chr20 1811889 1812254 -64855751 + AluJb SINE Alu 1 357 0 486 231 29 0 chr20 1812257 1812361 -64855644 + MER5B DNA MER1_type 68 174 -4 335 283 100 33 chr20 1812359 1812479 -64855526 + L2 LINE L2 3144 3271 -1 * 203 333 0 0 chr20 1812629 1812692 -64855313 - L2 LINE L2 -338 2976 2914 424 320 56 0 chr20 1812973 1813151 -64854854 - MIR SINE MIR -18 244 57 730 167 0 38 chr20 1814131 1814317 -64853688 + CT-rich Low_complexity Low_complexity 2 180 0 1789 152 0 31 chr20 1814349 1814638 -64853367 + AluJo SINE Alu 1 280 -32 180 0 0 0 chr20 1814638 1814658 -64853347 + (TAAAA)n Simple_repeat Simple_repeat 1 20 0 667 318 121 27 chr20 1814752 1815457 -64852548 - L2 LINE L2 -16 3297 2507 234 0 0 0 chr20 1815457 1815483 -64852522 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 667 318 121 27 chr20 1815483 1815506 -64852499 - L2 LINE L2 -806 2507 2488 475 243 7 49 chr20 1815497 1815641 -64852364 + MIR3 SINE MIR 45 182 -26 * 244 241 52 0 chr20 1816058 1816116 -64851889 - MIR SINE MIR -90 172 112 230 343 6 90 chr20 1816376 1816542 -64851463 - L2 LINE L2 0 3272 3121 399 255 179 0 chr20 1816573 1816718 -64851287 + MIR SINE MIR 89 259 -3 1433 268 123 2 chr20 1816772 1817186 -64850819 - LTR16B LTR ERVL 0 464 1 358 316 21 21 chr20 1817627 1817814 -64850191 - MIR3 SINE MIR -21 187 1 205 360 18 45 chr20 1818570 1818681 -64849324 - MIR3 SINE MIR -25 183 76 425 191 198 0 chr20 1818729 1818855 -64849150 + MIR SINE MIR 38 188 -74 342 333 135 0 chr20 1818993 1819134 -64848871 - MIR SINE MIR -59 203 44 343 320 40 0 chr20 1819179 1819279 -64848726 - L2 LINE L2 0 3313 3210 387 204 150 0 chr20 1819296 1819409 -64848596 - MIR SINE MIR -96 166 37 1011 297 80 23 chr20 1819817 1820302 -64847703 - LTR33 LTR ERVL -5 516 4 285 151 19 0 chr20 1820409 1820462 -64847543 - MLT1I LTR MaLR -16 393 340 749 213 202 0 chr20 1820462 1820645 -64847360 + MER58A DNA MER1_type 5 224 0 * 925 289 29 26 chr20 1820645 1820989 -64847016 - MLT1I LTR MaLR -60 349 5 757 209 12 6 chr20 1821393 1821556 -64846449 + MER5A DNA MER1_type 3 166 -23 1424 240 113 15 chr20 1821608 1822442 -64845563 + L2 LINE L2 2380 3308 -5 407 245 106 49 chr20 1822596 1822807 -64845198 + MIR SINE MIR 33 246 -16 408 277 22 36 chr20 1822917 1823054 -64844951 + MIR3 SINE MIR 42 176 -32 538 229 118 17 chr20 1823266 1823446 -64844559 + MIR SINE MIR 64 262 0 460 251 143 30 chr20 1823465 1823668 -64844337 - MIR SINE MIR -29 233 8 270 318 0 13 chr20 1824473 1824627 -64843378 + (CA)n Simple_repeat Simple_repeat 1 152 0 225 340 52 0 chr20 1824627 1824724 -64843281 + MIR SINE MIR 70 171 -91 342 290 75 32 chr20 1824769 1824955 -64843050 - L2 LINE L2 -1 3312 3119 893 294 89 12 chr20 1825291 1825873 -64842132 - L2 LINE L2 -127 3186 2566 1068 287 80 22 chr20 1825897 1826360 -64841645 - L2 LINE L2 -7 3306 2817 3031 161 38 7 chr20 1827359 1827919 -64840086 + L1MB3 LINE L1 5607 6183 0 960 276 93 30 chr20 1828023 1828501 -64839504 + L2 LINE L2 2803 3312 -1 748 288 151 24 chr20 1828853 1829158 -64838847 - L2 LINE L2 0 3313 2940 1827 174 7 64 chr20 1829158 1829329 -64838676 + MSTD LTR MaLR 1 180 -216 2064 142 30 3 chr20 1829329 1829631 -64838374 + AluSx SINE Alu 1 310 -2 1827 174 7 64 chr20 1829631 1829879 -64838126 + MSTD LTR MaLR 180 396 0 748 288 151 24 chr20 1829879 1829990 -64838015 - L2 LINE L2 -373 2940 2844 1080 217 13 4 chr20 1830677 1830907 -64837098 + MIR SINE MIR 9 240 -22 566 319 19 28 chr20 1831417 1831630 -64836375 - MIR SINE MIR 0 262 52 479 284 21 66 chr20 1832156 1832445 -64835560 + L1MCa LINE L1 914 1189 -5237 1325 277 40 45 chr20 1832521 1832695 -64835310 - L2 LINE L2 -1 3312 3139 2655 88 6 0 chr20 1832695 1833057 -64834948 - THE1B LTR MaLR 0 364 1 1325 277 40 45 chr20 1833057 1833677 -64834328 - L2 LINE L2 -174 3139 2525 365 340 47 34 chr20 1834170 1834405 -64833600 + L2 LINE L2 2615 2852 -462 384 289 79 9 chr20 1834666 1834780 -64833225 - MER117 DNA MER1_type -16 181 60 1927 111 7 28 chr20 1834801 1835139 -64832866 + AluSx SINE Alu 1 332 0 800 107 0 50 chr20 1835145 1835266 -64832739 - AluSq SINE Alu -130 183 69 218 248 9 53 chr20 1835274 1835387 -64832618 + G-rich Low_complexity Low_complexity 4 111 0 320 300 31 31 chr20 1835393 1835523 -64832482 + MIR3 SINE MIR 52 181 -27 241 321 57 0 chr20 1835547 1835653 -64832352 - L2 LINE L2 -19 3253 3142 470 17 17 0 chr20 1835656 1835715 -64832290 + (TG)n Simple_repeat Simple_repeat 2 61 0 413 300 20 0 chr20 1836061 1836211 -64831794 - MER103 DNA DNA -13 153 1 347 332 118 37 chr20 1836267 1836616 -64831389 - MLT1K LTR MaLR -33 555 179 953 328 48 32 chr20 1836718 1837215 -64830790 + MLT1L LTR MaLR 32 536 -79 257 252 71 31 chr20 1837777 1837904 -64830101 + L1ME4a LINE L1 5724 5855 -266 387 284 57 57 chr20 1837917 1838111 -64829894 + L1ME4a LINE L1 5926 6119 -2 353 330 35 25 chr20 1838524 1838724 -64829281 - MIR SINE MIR 0 262 61 776 307 106 40 chr20 1838908 1839286 -64828719 + L2 LINE L2 2911 3313 0 1595 154 11 28 chr20 1839410 1839695 -64828310 - AluJo SINE Alu -20 292 13 500 347 31 5 chr20 1839721 1839917 -64828088 - MIR SINE MIR -58 204 4 264 259 0 0 chr20 1839939 1839993 -64828012 + L2 LINE L2 3168 3221 -51 612 169 0 4 chr20 1840028 1840163 -64827842 + MER5A DNA MER1_type 1 189 0 294 259 241 44 chr20 1840923 1841081 -64826924 - MIR3 SINE MIR -56 152 2 302 315 63 24 chr20 1841412 1841539 -64826466 + MIR3 SINE MIR 67 198 -10 418 252 99 13 chr20 1841629 1841780 -64826225 - MIR SINE MIR -1 261 98 409 308 83 6 chr20 1841969 1842125 -64825880 + L3 LINE CR1 1354 1521 -56 908 209 60 5 chr20 1842184 1842399 -64825606 + MIR SINE MIR 36 262 0 293 206 137 0 chr20 1842673 1842746 -64825259 - MIR SINE MIR -62 146 64 258 259 123 0 chr20 1843325 1843406 -64824599 - MIR SINE MIR -61 147 57 2710 124 12 19 chr20 1843558 1843984 -64824021 - L1PA13 LINE L1 -4 6159 5737 787 298 34 8 chr20 1843998 1844233 -64823772 - MIR SINE MIR -14 248 8 593 273 92 83 chr20 1844396 1844807 -64823198 + MLT1J LTR MaLR 91 505 -6 324 248 174 16 chr20 1845177 1845298 -64822707 - L2 LINE L2 -6 3307 3168 261 271 65 37 chr20 1845383 1845490 -64822515 - MLT1L LTR MaLR -202 391 200 429 219 79 9 chr20 1846253 1846367 -64821638 + MIR SINE MIR 26 147 -115 410 186 144 0 chr20 1846365 1846462 -64821543 - L2 LINE L2 0 3313 3203 * 748 307 35 58 chr20 1846854 1847281 -64820724 - L2 LINE L2 0 3313 2897 365 303 25 0 chr20 1847442 1847564 -64820441 - MIR3 SINE MIR -75 133 9 619 304 91 29 chr20 1848446 1848788 -64819217 - L2 LINE L2 -18 3295 2933 1184 242 48 22 chr20 1849068 1849382 -64818623 - LTR16C LTR ERVL -1 490 169 822 150 0 0 chr20 1849711 1849844 -64818161 + FRAM SINE Alu 41 173 -3 333 320 39 8 chr20 1850053 1850181 -64817824 + MIR SINE MIR 85 216 -46 224 265 15 0 chr20 1850253 1850321 -64817684 - L2 LINE L2 -56 3257 3189 337 293 130 40 chr20 1850321 1850574 -64817431 + L1ME4a LINE L1 5844 6119 -2 204 168 12 62 chr20 1851453 1851614 -64816391 + (TA)n Simple_repeat Simple_repeat 2 154 0 598 231 64 25 chr20 1851681 1851930 -64816075 + MLT1K LTR MaLR 295 588 0 831 206 183 4 chr20 1852134 1852386 -64815619 + MLT1J2 LTR MaLR 154 450 0 336 313 30 30 chr20 1852541 1852672 -64815333 + L2 LINE L2 3138 3268 -4 734 242 34 6 chr20 1853253 1853431 -64814574 + MIR SINE MIR 2 184 -78 717 89 32 8 chr20 1853458 1853581 -64814424 + CT-rich Low_complexity Low_complexity 2 127 0 1950 139 19 10 chr20 1853585 1853894 -64814111 - AluSx SINE Alu 0 312 1 612 133 17 25 chr20 1853901 1854021 -64813984 + Charlie1 DNA MER1_type 2631 2749 -12 400 282 43 0 chr20 1854468 1854585 -64813420 + MIR SINE MIR 79 200 -62 261 128 0 0 chr20 1854586 1854625 -64813380 - MLT1B LTR MaLR 0 390 352 2108 131 0 0 chr20 1854628 1854940 -64813065 + AluSx SINE Alu 1 312 0 578 126 0 0 chr20 1854972 1855062 -64812943 + MLT1C LTR MaLR 333 459 -46 416 313 23 8 chr20 1855128 1855256 -64812749 - L2 LINE L2 -4 3309 3180 307 284 0 0 chr20 1855243 1855324 -64812681 - L2 LINE L2 -491 2823 2743 * 2106 102 8 72 chr20 1855333 1855695 -64812310 - MLT1B LTR MaLR -48 342 4 492 249 158 11 chr20 1855791 1855968 -64812037 - LTR16A LTR ERVL -232 218 16 285 286 109 8 chr20 1855968 1856087 -64811918 + MIR SINE MIR 67 197 -65 1078 245 106 48 chr20 1856097 1856676 -64811329 - L2 LINE L2 -1 3312 2701 184 260 52 39 chr20 1856811 1856888 -64811117 + L2 LINE L2 2976 3053 -219 292 155 0 17 chr20 1856981 1857039 -64810966 + MIR SINE MIR 101 157 -105 218 245 0 20 chr20 1857510 1857559 -64810446 + L2 LINE L2 3216 3263 -9 347 266 9 18 chr20 1857573 1857682 -64810323 + MIR SINE MIR 37 144 -118 1781 185 95 19 chr20 1858055 1858423 -64809582 + MSTD LTR MaLR 1 396 0 510 291 158 2 chr20 1858517 1858736 -64809269 - MIR SINE MIR -2 260 13 462 225 219 25 chr20 1858740 1858900 -64809105 + MIR SINE MIR 2 192 -70 354 222 69 106 chr20 1859179 1859368 -64808637 - MER5A DNA MER1_type -7 182 1 292 213 67 0 chr20 1859375 1859450 -64808555 + MIR SINE MIR 118 197 -65 234 243 14 14 chr20 1859901 1859971 -64808034 + MIR SINE MIR 64 133 -129 298 74 37 0 chr20 1860211 1860265 -64807740 + (CA)n Simple_repeat Simple_repeat 2 57 0 207 328 0 0 chr20 1860581 1860642 -64807363 + L2 LINE L2 3203 3263 -50 325 211 19 10 chr20 1860762 1860866 -64807139 + (CA)n Simple_repeat Simple_repeat 1 105 0 231 319 0 0 chr20 1860893 1860984 -64807021 + L2 LINE L2 2882 2972 -300 251 224 26 53 chr20 1861051 1861127 -64806878 - MIR SINE MIR -90 118 45 197 306 266 8 chr20 1861203 1861327 -64806678 - L2 LINE L2 -1 3271 3116 283 212 204 9 chr20 1861644 1861757 -64806248 - MIR SINE MIR -96 166 32 407 179 36 0 chr20 1861965 1862049 -64805956 + MIR SINE MIR 70 156 -106 562 266 113 8 chr20 1862066 1862322 -64805683 + L2 LINE L2 2830 3112 -201 205 185 130 0 chr20 1862581 1862635 -64805370 + L2 LINE L2 3193 3253 -60 211 173 192 0 chr20 1863556 1863608 -64804397 - MIR SINE MIR -196 66 5 199 139 0 56 chr20 1863806 1863842 -64804163 + MER5A DNA MER1_type 156 189 0 561 231 51 19 chr20 1863937 1864093 -64803912 - MIR SINE MIR 0 262 102 258 306 102 27 chr20 1865235 1865382 -64802623 + MIR SINE MIR 1 158 -104 573 282 151 17 chr20 1865405 1866162 -64801843 - L2 LINE L2 -2 3311 2444 185 182 23 0 chr20 1866432 1866476 -64801529 - MIR SINE MIR -104 104 60 220 136 23 0 chr20 1866567 1866611 -64801394 + L2 LINE L2 2921 2965 -348 291 353 98 27 chr20 1867471 1867695 -64800310 - L2 LINE L2 -17 3255 3016 277 286 107 9 chr20 1867704 1867816 -64800189 - L2 LINE L2 -2 3311 3189 285 89 0 0 chr20 1867959 1868004 -64800001 + (GGGA)n Simple_repeat Simple_repeat 4 48 0 2313 79 0 28 chr20 1868147 1868464 -64799541 - AluSx SINE Alu -4 308 1 327 259 5 54 chr20 1869490 1869675 -64798330 + (CA)n Simple_repeat Simple_repeat 1 176 0 221 314 12 0 chr20 1869731 1869817 -64798188 + (CA)n Simple_repeat Simple_repeat 2 88 0 368 275 169 0 chr20 1870128 1870288 -64797717 + L3 LINE CR1 1391 1577 0 429 247 31 21 chr20 1870308 1870502 -64797503 - Charlie7 DNA MER1_type 0 2612 2417 563 304 72 36 chr20 1870524 1870774 -64797231 - MIR SINE MIR 0 262 4 490 220 10 0 chr20 1870956 1871056 -64796949 + MER5A DNA MER1_type 9 109 -80 548 265 309 8 chr20 1871267 1871717 -64796288 + L2 LINE L2 2725 3307 -6 246 213 118 88 chr20 1872107 1872243 -64795762 + MIR SINE MIR 53 192 -70 198 322 157 9 chr20 1872334 1872449 -64795556 + MIR3 SINE MIR 14 145 -63 1302 250 152 11 chr20 1872889 1873689 -64794316 - L2 LINE L2 -1 3312 2394 188 33 0 33 chr20 1873730 1873760 -64794245 + (TCTCTG)n Simple_repeat Simple_repeat 2 30 0 277 219 287 1 chr20 1873779 1873903 -64794102 - MIR SINE MIR -51 157 1 637 309 36 5 chr20 1874130 1874353 -64793652 + MIR SINE MIR 13 242 -20 1032 215 0 0 chr20 1874837 1875023 -64792982 + MER5A DNA MER1_type 1 186 -3 972 191 0 5 chr20 1875184 1875373 -64792632 - AluJo SINE Alu -2 310 123 318 217 191 9 chr20 1875454 1875569 -64792436 - MIR SINE MIR -51 211 76 408 266 62 23 chr20 1875616 1875793 -64792212 - L2 LINE L2 -119 3194 3011 221 286 36 0 chr20 1875790 1875846 -64792159 + MIR3 SINE MIR 109 166 -42 * 183 270 234 27 chr20 1876353 1876464 -64791541 + MIR SINE MIR 85 218 -44 218 258 93 31 chr20 1876573 1876670 -64791335 - MIR SINE MIR -110 152 50 503 279 156 8 chr20 1876714 1876951 -64791054 - L2 LINE L2 -580 2734 2463 719 237 98 44 chr20 1876987 1877261 -64790744 + L2 LINE L2 3025 3313 0 363 268 102 13 chr20 1877849 1878006 -64789999 + L2 LINE L2 2618 2788 -526 297 274 244 17 chr20 1878096 1878326 -64789679 + L2 LINE L2 2944 3225 -88 550 266 136 14 chr20 1878425 1878639 -64789366 - MIR SINE MIR -5 257 18 300 279 117 9 chr20 1878745 1878856 -64789149 + MIR3 SINE MIR 33 155 -53 32 0 0 0 chr20 1879536 1879568 -64788437 + GC_rich Low_complexity Low_complexity 1 32 0 237 219 0 16 chr20 1879794 1879858 -64788147 + (CGGGG)n Simple_repeat Simple_repeat 1 63 0 21 36 0 0 chr20 1879926 1879954 -64788051 + GC_rich Low_complexity Low_complexity 1 28 0 28 71 0 0 chr20 1879968 1880024 -64787981 + GC_rich Low_complexity Low_complexity 1 56 0 23 78 0 0 chr20 1880239 1880290 -64787715 + GC_rich Low_complexity Low_complexity 1 51 0 275 283 7 36 chr20 1880361 1880538 -64787467 + CT-rich Low_complexity Low_complexity 6 268 0 22 0 0 0 chr20 1880569 1880591 -64787414 + GC_rich Low_complexity Low_complexity 1 22 0 28 29 0 0 chr20 1880740 1880775 -64787230 + GC_rich Low_complexity Low_complexity 1 35 0 365 146 195 0 chr20 1880940 1881022 -64786983 - MIR SINE MIR -69 139 42 193 269 0 19 chr20 1883825 1883877 -64784128 - MIR SINE MIR -60 148 98 257 296 0 0 chr20 1884431 1884502 -64783503 + L2 LINE L2 2704 2774 -540 233 345 0 23 chr20 1884655 1884742 -64783263 - MER103 DNA DNA -67 99 15 241 292 17 50 chr20 1884837 1884957 -64783048 + L2 LINE L2 2920 3035 -237 501 297 139 5 chr20 1885014 1885216 -64782789 + MIR SINE MIR 34 262 0 2233 65 41 0 chr20 1885379 1885671 -64782334 - AluSp SINE Alu -4 309 6 372 333 58 24 chr20 1886122 1886329 -64781676 - MIR SINE MIR -43 219 6 2386 90 0 0 chr20 1886447 1886758 -64781247 - AluSx SINE Alu -1 311 1 317 304 37 30 chr20 1887558 1887693 -64780312 - MIR SINE MIR -71 191 56 1095 253 104 23 chr20 1887753 1888017 -64779988 - L2 LINE L2 -4 3309 2993 2411 87 0 0 chr20 1888017 1888329 -64779676 + AluSx SINE Alu 1 312 0 1095 253 104 23 chr20 1888329 1888507 -64779498 - L2 LINE L2 -320 2993 2831 616 217 53 16 chr20 1888522 1888725 -64779280 - MIR SINE MIR -15 247 40 186 286 60 0 chr20 1888720 1888804 -64779201 + L2 LINE L2 2606 2694 -620 * 830 310 111 18 chr20 1888858 1889316 -64778689 + L2 LINE L2 2812 3312 -1 243 390 8 8 chr20 1889763 1889886 -64778119 + MIR SINE MIR 70 192 -70 210 321 30 30 chr20 1889977 1890108 -64777897 + MIR3 SINE MIR 64 194 -14 517 255 22 33 chr20 1890186 1890370 -64777635 + MIR SINE MIR 31 212 -50 257 206 221 59 chr20 1890622 1890758 -64777247 + MIR SINE MIR 34 191 -71 243 158 0 0 chr20 1890895 1890933 -64777072 + MIR SINE MIR 112 149 -59 392 285 162 39 chr20 1891359 1891538 -64776467 - MIR SINE MIR -17 245 45 585 297 151 34 chr20 1891550 1892186 -64775819 - L2 LINE L2 -39 3274 2461 235 273 191 0 chr20 1892252 1892362 -64775643 - MIR SINE MIR -115 147 17 440 328 119 25 chr20 1892774 1893094 -64774911 + L2 LINE L2 2923 3272 0 240 269 27 20 chr20 1893582 1893731 -64774274 + (CA)n Simple_repeat Simple_repeat 1 150 0 2298 94 0 0 chr20 1894787 1895084 -64772921 + AluSq SINE Alu 1 297 -16 375 226 0 12 chr20 1895183 1895267 -64772738 + L2 LINE L2 1912 1994 -1320 233 262 135 48 chr20 1895379 1895505 -64772500 + L2 LINE L2 3146 3282 -31 428 178 33 0 chr20 1895822 1895912 -64772093 - L2 LINE L2 -7 3306 3214 310 327 115 62 chr20 1895993 1896219 -64771786 - L1ME4a LINE L1 -11 6110 5873 352 303 101 0 chr20 1896610 1896729 -64771276 + L1ME4a LINE L1 5985 6115 -6 233 331 46 13 chr20 1896731 1896882 -64771123 - L1ME4a LINE L1 -242 5879 5724 259 333 0 0 chr20 1896971 1897049 -64770956 - L1ME4a LINE L1 -2214 5594 5517 351 322 68 11 chr20 1899448 1899625 -64768380 - MIR SINE MIR -48 214 28 262 278 26 0 chr20 1899655 1899745 -64768260 - MIR SINE MIR -66 142 104 354 273 133 0 chr20 1900011 1900139 -64767866 + L2 LINE L2 2899 3043 -229 299 284 147 0 chr20 1900167 1900262 -64767743 + MIR SINE MIR 96 204 -58 292 309 0 12 chr20 1900864 1900945 -64767060 - MIR SINE MIR -116 146 67 268 173 158 0 chr20 1900997 1901068 -64766937 - MIR3 SINE MIR -50 158 77 193 304 0 0 chr20 1901118 1901164 -64766841 - L2 LINE L2 -2 3270 3225 413 308 64 6 chr20 1901552 1901708 -64766297 - MIR3 SINE MIR -8 200 36 684 304 84 0 chr20 1901924 1902187 -64765818 - L1MC4a LINE L1 -1957 5851 5567 253 299 73 36 chr20 1902263 1902400 -64765605 - MIR3 SINE MIR -66 142 1 348 274 110 24 chr20 1902492 1902656 -64765349 - MIR SINE MIR -82 180 3 808 131 8 0 chr20 1902724 1902846 -64765159 + AluSg/x SINE Alu 177 299 -11 303 330 61 0 chr20 1903331 1903446 -64764559 + MIR SINE MIR 98 219 -43 2013 96 12 52 chr20 1903475 1903799 -64764206 - AluSq SINE Alu -2 311 1 408 261 27 0 chr20 1903816 1903927 -64764078 + MIR SINE MIR 79 192 -70 316 240 108 39 chr20 1903976 1904105 -64763900 + MIR SINE MIR 84 221 -41 686 295 59 25 chr20 1904141 1904378 -64763627 + MIR SINE MIR 14 258 -4 532 274 65 18 chr20 1904459 1904627 -64763378 - MER5B DNA MER1_type -2 176 1 215 211 0 0 chr20 1905282 1905320 -64762685 - L2 LINE L2 -18 3254 3217 197 264 132 23 chr20 1905378 1905507 -64762498 + MIR SINE MIR 108 250 -12 220 286 57 14 chr20 1906129 1906199 -64761806 - MIR SINE MIR -64 198 126 223 341 85 0 chr20 1906428 1906557 -64761448 + MIR SINE MIR 28 167 -95 183 356 0 0 chr20 1907382 1907441 -64760564 - MIR SINE MIR 0 262 204 364 304 22 71 chr20 1907997 1908181 -64759824 - HAL1b LINE L1 -5 1343 1169 242 276 23 23 chr20 1908340 1908427 -64759578 - L1MC/D LINE L1 -2057 5751 5665 388 286 48 75 chr20 1909000 1909228 -64758777 + MIR3 SINE MIR 32 252 -10 474 18 0 0 chr20 1909256 1909311 -64758694 + (TTGG)n Simple_repeat Simple_repeat 2 56 0 382 256 78 67 chr20 1909314 1909494 -64758511 - MIR SINE MIR -76 186 5 286 294 60 80 chr20 1910352 1910553 -64757452 - MLT1L LTR MaLR -222 393 197 236 226 122 43 chr20 1910573 1910688 -64757317 + MIR SINE MIR 139 262 0 208 171 24 0 chr20 1910816 1910857 -64757148 + (TG)n Simple_repeat Simple_repeat 1 42 0 318 332 168 5 chr20 1910899 1911089 -64756916 + MIR SINE MIR 29 249 -13 225 273 11 0 chr20 1911197 1911285 -64756720 + MER112 DNA MER1_type 111 199 -61 755 259 37 5 chr20 1911875 1912064 -64755941 - MIR SINE MIR -21 241 47 266 281 16 0 chr20 1912178 1912242 -64755763 + MIR SINE MIR 53 117 -91 246 303 30 40 chr20 1912683 1912782 -64755223 - MIR SINE MIR -86 122 25 245 336 143 0 chr20 1913545 1913664 -64754341 - L2 LINE L2 -1 3271 3136 452 263 42 63 chr20 1913707 1913897 -64754108 - L2 LINE L2 -1 3312 3127 674 279 65 0 chr20 1914194 1914409 -64753596 - MER46C DNA MER2_type -109 229 1 871 239 137 0 chr20 1914411 1914695 -64753310 - L2 LINE L2 -506 2808 2486 216 129 0 0 chr20 1915404 1915435 -64752570 + MER91 DNA MER1_type 78 108 -32 271 391 29 24 chr20 1915515 1915722 -64752283 + L2 LINE L2 3065 3272 0 2284 89 3 13 chr20 1915861 1916177 -64751828 - AluSp SINE Alu 0 313 1 571 254 18 127 chr20 1916265 1916396 -64751609 - MIR SINE MIR 0 262 177 870 158 152 0 chr20 1916396 1916560 -64751445 - MER5A DNA MER1_type 0 189 1 571 254 18 127 chr20 1916560 1916711 -64751294 - MIR SINE MIR -85 177 11 188 359 111 0 chr20 1917224 1917341 -64750664 - L2 LINE L2 -1 3271 3142 297 0 0 0 chr20 1917341 1917374 -64750631 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 889 295 123 22 chr20 1917375 1918223 -64749782 - L2 LINE L2 -14 3299 2364 323 307 114 29 chr20 1919206 1919346 -64748659 - L1ME4a LINE L1 0 6121 5970 547 295 74 50 chr20 1919545 1919908 -64748097 - L1ME4a LINE L1 -2116 5692 5321 211 217 43 0 chr20 1921007 1921053 -64746952 - L2 LINE L2 -4 3268 3221 332 328 84 8 chr20 1921195 1921379 -64746626 + MIR SINE MIR 3 205 -41 1019 195 49 26 chr20 1921594 1921820 -64746185 - MIR SINE MIR 0 262 32 181 320 0 0 chr20 1921974 1922024 -64745981 + L2 LINE L2 3223 3272 0 426 53 0 0 chr20 1923255 1923312 -64744693 + (CCA)n Simple_repeat Simple_repeat 2 58 0 227 162 0 0 chr20 1924068 1924105 -64743900 + MIR SINE MIR 116 152 -110 21 0 0 0 chr20 1924899 1924920 -64743085 + AT_rich Low_complexity Low_complexity 1 21 0 375 317 111 0 chr20 1925409 1925589 -64742416 + MIR SINE MIR 48 247 -15 208 358 158 18 chr20 1925638 1925803 -64742202 + MIR SINE MIR 69 256 -6 252 330 210 10 chr20 1925880 1926080 -64741925 - MIR SINE MIR -16 246 7 490 279 134 0 chr20 1926145 1926317 -64741688 - MIR SINE MIR -32 230 36 325 331 70 7 chr20 1926336 1926478 -64741527 - MIR SINE MIR -64 198 48 563 247 22 60 chr20 1927197 1927379 -64740626 - MIR SINE MIR -19 243 69 714 221 137 5 chr20 1927717 1927921 -64740084 + L1ME3 LINE L1 5926 6156 -6 424 325 35 6 chr20 1928278 1928447 -64739558 + MIR SINE MIR 77 250 -12 207 175 0 0 chr20 1928447 1928487 -64739518 + (CA)n Simple_repeat Simple_repeat 1 40 0 272 351 91 19 chr20 1928886 1929040 -64738965 - MIR SINE MIR -24 238 74 237 321 25 0 chr20 1929025 1929106 -64738899 - L2 LINE L2 -2 3311 3229 * 1072 246 58 50 chr20 1929221 1929603 -64738402 - LTR37B LTR ERV1 -78 390 6 197 346 0 63 chr20 1929623 1929750 -64738255 - L2 LINE L2 -200 3072 2954 * 260 333 113 0 chr20 1929748 1929925 -64738080 + L2 LINE L2 2774 2970 -344 216 373 73 17 chr20 1930010 1930187 -64737818 + L2 LINE L2 3120 3306 -7 192 220 18 9 chr20 1930190 1930299 -64737706 + (TGGA)n Simple_repeat Simple_repeat 2 111 0 227 200 36 18 chr20 1930299 1930354 -64737651 + GA-rich Low_complexity Low_complexity 2 57 0 1409 142 117 25 chr20 1931388 1931662 -64736343 - AluJo SINE Alu -11 301 3 768 182 134 32 chr20 1931662 1931880 -64736125 + L1ME1 LINE L1 5919 6161 -5 735 259 47 14 chr20 1931902 1932114 -64735891 - MIR SINE MIR 0 262 44 215 321 48 12 chr20 1932998 1933082 -64734923 - MIR SINE MIR -87 121 35 801 264 9 27 chr20 1933157 1933377 -64734628 + MIR SINE MIR 32 247 -15 261 0 0 0 chr20 1933518 1933547 -64734458 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 404 256 128 95 chr20 1933587 1933709 -64734296 - L2 LINE L2 -74 3239 3122 1542 176 6 61 chr20 1933709 1934039 -64733966 + AluSx SINE Alu 1 312 0 404 256 128 95 chr20 1934039 1934221 -64733784 - L2 LINE L2 -191 3122 2925 323 328 8 42 chr20 1934569 1934688 -64733317 - L1MC/D LINE L1 -2013 5795 5681 759 151 0 0 chr20 1935651 1935770 -64732235 - AluSg/x SINE Alu 0 310 192 2279 129 0 0 chr20 1935653 1935963 -64732042 - AluSx SINE Alu -2 310 1 380 332 94 47 chr20 1936034 1936269 -64731736 - MIR SINE MIR -2 260 15 613 165 112 41 chr20 1936577 1936747 -64731258 + MER53 DNA DNA 8 189 0 246 172 86 0 chr20 1937166 1937224 -64730781 + L2 LINE L2 2992 3054 -218 199 122 41 0 chr20 1937335 1937384 -64730621 + GA-rich Low_complexity Low_complexity 2 52 0 916 263 4 18 chr20 1937545 1937773 -64730232 + MIR SINE MIR 8 232 -30 361 259 184 49 chr20 1938010 1938195 -64729810 + MIR SINE MIR 37 246 -16 937 136 6 6 chr20 1938387 1938556 -64729449 + (GGAA)n Simple_repeat Simple_repeat 4 172 0 264 160 20 0 chr20 1938562 1938612 -64729393 + GA-rich Low_complexity Low_complexity 2 52 0 204 314 221 0 chr20 1939256 1939342 -64728663 - L2 LINE L2 -18 3295 3191 443 273 99 17 chr20 1939372 1939485 -64728520 + MER5A DNA MER1_type 4 137 -52 2492 37 40 3 chr20 1939485 1939784 -64728221 - AluY SINE Alu -1 310 1 443 273 99 17 chr20 1939784 1939842 -64728163 + MER5A DNA MER1_type 137 189 0 2127 133 7 7 chr20 1939935 1940237 -64727768 - AluSx SINE Alu -10 302 1 243 254 87 14 chr20 1940300 1940438 -64727567 - L1ME4a LINE L1 -29 6092 5945 2877 163 160 26 chr20 1940476 1941060 -64726945 + LTR48 LTR ERV1 1 694 -93 1690 193 3 25 chr20 1941060 1941376 -64726629 - AluJo SINE Alu -3 309 1 2877 163 160 26 chr20 1941376 1941485 -64726520 + LTR48 LTR ERV1 694 787 0 1018 166 44 0 chr20 1941491 1941672 -64726333 - MER5A DNA MER1_type 0 189 1 371 265 122 41 chr20 1941706 1941853 -64726152 + MIR SINE MIR 52 210 -52 763 281 83 17 chr20 1941982 1942323 -64725682 - L1ME4a LINE L1 -405 5716 5391 204 371 0 0 chr20 1942590 1942660 -64725345 - L2 LINE L2 -2 3270 3201 204 263 0 35 chr20 1942781 1942838 -64725167 + MIR SINE MIR 31 85 -177 3283 240 41 32 chr20 1943117 1943392 -64724613 + L1MEc LINE L1 247 518 -6089 1281 177 14 140 chr20 1943392 1943437 -64724568 + MLT1A1 LTR MaLR 1 50 -315 1719 182 10 23 chr20 1943437 1943739 -64724266 + AluJo SINE Alu 1 298 -14 1281 177 14 140 chr20 1943739 1944106 -64723899 + MLT1A1 LTR MaLR 50 361 -4 3283 240 41 32 chr20 1944106 1944948 -64723057 + L1MEc LINE L1 518 1455 -5152 236 230 27 0 chr20 1944985 1945059 -64722946 + L1MC4 LINE L1 6617 6692 -1350 180 0 0 0 chr20 1945067 1945087 -64722918 + (TA)n Simple_repeat Simple_repeat 2 21 0 302 200 75 0 chr20 1945100 1945180 -64722825 + L1MEc LINE L1 1455 1540 -4886 507 286 8 28 chr20 1945274 1945522 -64722483 + L1MEc LINE L1 1417 1659 -4767 1365 146 4 40 chr20 1945522 1945748 -64722257 + AluJb SINE Alu 87 304 -8 2770 192 25 27 chr20 1945749 1946422 -64721583 + L1MEc LINE L1 1849 2520 -4087 201 228 152 25 chr20 1946826 1946905 -64721100 - L3 LINE CR1 -1044 533 445 449 332 40 65 chr20 1946990 1947237 -64720768 - L2 LINE L2 0 3272 3032 360 279 89 32 chr20 1948053 1948243 -64719762 + L2 LINE L2 2840 3040 -232 246 231 0 0 chr20 1948492 1948557 -64719448 + GA-rich Low_complexity Low_complexity 1 65 0 285 247 12 0 chr20 1948567 1948648 -64719357 + (TGGA)n Simple_repeat Simple_repeat 4 85 0 314 284 6 0 chr20 1948666 1948842 -64719163 + (TGAA)n Simple_repeat Simple_repeat 4 180 0 23 0 0 0 chr20 1948862 1948885 -64719120 + AT_rich Low_complexity Low_complexity 1 23 0 415 216 0 0 chr20 1949002 1949076 -64718929 + L2 LINE L2 3240 3313 0 300 330 46 9 chr20 1949136 1949245 -64718760 + MIR SINE MIR 40 152 -56 3665 147 41 35 chr20 1949279 1949910 -64718095 - MER41B LTR ERV1 0 635 1 1570 177 126 49 chr20 1950126 1950556 -64717449 + MER31B LTR ERV1 2 464 -2 357 209 11 33 chr20 1951546 1951637 -64716368 - LTR16A1 LTR ERVL -128 329 241 950 290 21 39 chr20 1952945 1953215 -64714790 + MLT1J LTR MaLR 1 263 -248 2652 140 11 32 chr20 1953215 1953650 -64714355 + MSTB LTR MaLR 1 426 0 950 290 21 39 chr20 1953650 1953765 -64714240 + MLT1J LTR MaLR 263 379 -132 346 133 72 36 chr20 1953805 1953888 -64714117 + MLT1H LTR MaLR 38 123 -426 326 215 193 7 chr20 1954087 1954222 -64713783 + MLT1J LTR MaLR 382 541 -8 368 185 62 0 chr20 1954229 1954310 -64713695 + MLT1J LTR MaLR 389 474 -37 280 254 56 0 chr20 1954812 1954883 -64713122 + MIR SINE MIR 108 182 -80 522 276 45 49 chr20 1954989 1955174 -64712831 + L2 LINE L2 2830 3015 -298 2033 128 26 10 chr20 1955174 1955480 -64712525 - AluY SINE Alu 0 311 1 522 276 45 49 chr20 1955480 1955540 -64712465 + L2 LINE L2 3015 3074 -239 2193 138 41 0 chr20 1955603 1955993 -64712012 + L1MC2 LINE L1 5657 6062 -282 24 53 0 0 chr20 1955995 1956033 -64711972 + AT_rich Low_complexity Low_complexity 1 38 0 1054 191 103 39 chr20 1956052 1956307 -64711698 + L1MC2 LINE L1 6045 6282 -62 2144 108 21 0 chr20 1956307 1956593 -64711412 + AluSx SINE Alu 1 292 -20 1054 191 103 39 chr20 1956593 1956605 -64711400 + L1MC2 LINE L1 6282 6292 -52 2415 92 0 9 chr20 1956605 1956920 -64711085 - AluSq SINE Alu -1 312 1 1054 191 103 39 chr20 1956920 1956933 -64711072 + L1MC2 LINE L1 6292 6344 0 820 239 136 35 chr20 1957256 1957624 -64710381 - MER113 DNA MER1_type? -114 407 3 386 245 66 0 chr20 1957763 1957869 -64710136 + MER94 DNA DNA 2 114 -20 589 231 48 14 chr20 1959139 1959286 -64708719 + L2 LINE L2 2650 2801 -513 690 302 74 55 chr20 1959406 1959880 -64708125 + L2 LINE L2 2831 3313 0 188 125 62 0 chr20 1959983 1960015 -64707990 - MIR SINE MIR -112 150 117 439 285 44 7 chr20 1961014 1961151 -64706854 + L1ME3 LINE L1 6021 6162 0 496 268 91 25 chr20 1961286 1961484 -64706521 + MLT1K LTR MaLR 317 527 -61 351 265 140 7 chr20 1961579 1961715 -64706290 - MIR SINE MIR -89 173 20 263 259 70 49 chr20 1961896 1962039 -64705966 + Charlie8 DNA MER1_type 50 195 -2222 561 298 55 38 chr20 1962201 1962436 -64705569 + MLT1K LTR MaLR 25 263 -325 559 253 104 11 chr20 1962462 1962644 -64705361 + MLT1K LTR MaLR 320 518 -70 401 321 121 38 chr20 1962753 1962993 -64705012 + L3 LINE CR1 1311 1570 -7 592 294 75 43 chr20 1963001 1963280 -64704725 + L2 LINE L2 3024 3311 -2 648 271 96 0 chr20 1963659 1963825 -64704180 - MIR SINE MIR 0 262 81 279 0 0 0 chr20 1963908 1963939 -64704066 + (TG)n Simple_repeat Simple_repeat 2 32 0 249 33 0 0 chr20 1965326 1965356 -64702649 + (CTG)n Simple_repeat Simple_repeat 1 30 0 220 291 100 27 chr20 1966426 1966536 -64701469 - MIR3 SINE MIR -77 131 14 2060 146 0 0 chr20 1966932 1967253 -64700752 + AluSx SINE Alu 2 322 0 2014 155 0 0 chr20 1967266 1967562 -64700443 + AluSx SINE Alu 5 300 -12 354 308 110 14 chr20 1967578 1967724 -64700281 - MIR3 SINE MIR -45 163 4 204 224 35 17 chr20 1968507 1968565 -64699440 - MIR SINE MIR -63 145 87 342 314 152 21 chr20 1968582 1968773 -64699232 - MIR SINE MIR -19 243 28 687 281 62 31 chr20 1969099 1969359 -64698646 + L2 LINE L2 2828 3095 -177 837 275 83 54 chr20 1969463 1969870 -64698135 + L2 LINE L2 2895 3313 0 2067 151 0 0 chr20 1969905 1970197 -64697808 + AluSx SINE Alu 2 293 -19 402 272 49 22 chr20 1970809 1970955 -64697050 - MIR SINE MIR -50 212 64 730 278 58 0 chr20 1971395 1971600 -64696405 - MIR SINE MIR -44 218 2 201 297 119 0 chr20 1971677 1971778 -64696227 + L2 LINE L2 2643 2755 -559 508 311 42 32 chr20 1971827 1972017 -64695988 - MIR SINE MIR -3 259 68 435 232 101 116 chr20 1972082 1972289 -64695716 + L2 LINE L2 2902 3105 -167 270 322 91 10 chr20 1972331 1972530 -64695475 - L2 LINE L2 -367 2947 2733 279 0 0 0 chr20 1972536 1972567 -64695438 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 389 248 0 44 chr20 1972640 1972753 -64695252 + Charlie8 DNA MER1_type 98 205 -2212 656 275 66 37 chr20 1972948 1973165 -64694840 + MIR SINE MIR 16 241 -21 492 306 35 30 chr20 1973373 1973572 -64694433 - MIR SINE MIR -3 259 60 473 196 9 54 chr20 1974098 1974210 -64693795 + MLT2D LTR ERVL 307 413 -1 660 222 7 7 chr20 1974211 1974355 -64693650 + MER58B DNA MER1_type 194 337 -4 262 322 30 26 chr20 1974968 1975104 -64692901 - MIR SINE MIR -61 147 19 214 266 119 46 chr20 1975214 1975323 -64692682 - MIR SINE MIR -90 172 56 291 343 56 11 chr20 1975370 1975548 -64692457 - MIR SINE MIR -37 225 40 303 322 0 0 chr20 1976028 1976221 -64691784 + GA-rich Low_complexity Low_complexity 1 193 0 341 272 20 20 chr20 1976235 1976382 -64691623 + GA-rich Low_complexity Low_complexity 1 147 0 651 266 99 21 chr20 1977346 1977538 -64690467 - MIR SINE MIR -8 254 48 210 272 49 37 chr20 1977532 1977613 -64690392 - L2 LINE L2 -41 3272 3191 * 189 0 0 0 chr20 1978340 1978361 -64689644 + (T)n Simple_repeat Simple_repeat 1 21 0 263 272 52 35 chr20 1979653 1979682 -64688323 + (CAGAGA)n Simple_repeat Simple_repeat 4 31 -148 204 40 0 0 chr20 1979682 1979707 -64688298 + (GA)n Simple_repeat Simple_repeat 2 26 0 263 272 52 35 chr20 1979707 1979850 -64688155 + (CAGAGA)n Simple_repeat Simple_repeat 31 179 0 * 327 330 0 0 chr20 1979750 1979933 -64688072 + GA-rich Low_complexity Low_complexity 1 183 0 462 303 52 7 chr20 1980510 1980665 -64687340 - MIR SINE MIR -73 189 28 460 313 49 0 chr20 1980921 1981084 -64686921 + MIR SINE MIR 49 219 -43 333 0 0 0 chr20 1982053 1982090 -64685915 + (CA)n Simple_repeat Simple_repeat 2 38 0 195 268 61 61 chr20 1982226 1982308 -64685697 + MIR SINE MIR 37 118 -144 668 309 36 0 chr20 1982552 1982804 -64685201 - MIR SINE MIR 0 262 2 183 205 0 0 chr20 1983106 1983145 -64684860 + CT-rich Low_complexity Low_complexity 2 40 0 710 293 40 63 chr20 1983149 1983528 -64684477 - L2 LINE L2 -5 3267 2898 1016 263 186 21 chr20 1983568 1983708 -64684297 + L2 LINE L2 2553 2669 -644 2372 120 0 0 chr20 1983708 1984017 -64683988 + AluSq SINE Alu 1 309 -4 1016 263 186 21 chr20 1984017 1984517 -64683488 + L2 LINE L2 2669 3311 -2 219 304 59 29 chr20 1984523 1984625 -64683380 - L2 LINE L2 -413 2901 2797 246 333 128 55 chr20 1984741 1984960 -64683045 - L2 LINE L2 -51 3221 2987 975 168 30 15 chr20 1984998 1985200 -64682805 + L1MB4 LINE L1 5500 5704 -476 201 74 0 0 chr20 1985200 1985227 -64682778 + (CAT)n Simple_repeat Simple_repeat 1 27 0 363 227 0 0 chr20 1985230 1985296 -64682709 - AluJ/FRAM SINE Alu -16 286 221 740 188 8 0 chr20 1985303 1985450 -64682555 - FLAM_C SINE Alu 0 148 1 1846 201 5 10 chr20 1985451 1985849 -64682156 + L1MB4 LINE L1 5701 6096 -84 678 301 55 17 chr20 1985934 1986170 -64681835 - MIR SINE MIR -6 256 12 520 281 69 31 chr20 1986221 1986463 -64681542 - MIR SINE MIR -13 249 3 587 267 109 9 chr20 1986762 1986983 -64681022 - MIR SINE MIR 0 262 20 310 335 51 51 chr20 1987288 1987563 -64680442 - L2 LINE L2 -4 3268 2994 257 356 11 0 chr20 1988028 1988118 -64679887 - LTR67 LTR ERVL -387 170 80 235 259 177 13 chr20 1988335 1988493 -64679512 - MIR3 SINE MIR -19 189 6 477 280 64 13 chr20 1988578 1988735 -64679270 + MIR SINE MIR 20 184 -78 202 369 6 0 chr20 1989064 1989224 -64678781 + (CA)n Simple_repeat Simple_repeat 2 162 0 207 0 0 0 chr20 1989488 1989511 -64678494 + (TC)n Simple_repeat Simple_repeat 2 24 0 868 222 81 17 chr20 1989943 1990177 -64677828 + MIR SINE MIR 2 250 -12 1077 288 107 11 chr20 1990256 1990694 -64677311 + L2 LINE L2 2834 3313 0 372 317 10 0 chr20 1991641 1991745 -64676260 + L2 LINE L2 3168 3272 0 324 264 109 15 chr20 1991750 1991903 -64676102 - MIR SINE MIR -61 147 22 242 327 10 50 chr20 1991970 1992071 -64675934 + MIR SINE MIR 56 152 -56 343 357 8 0 chr20 1993006 1993135 -64674870 + MIR SINE MIR 21 150 -58 1138 225 125 19 chr20 1993154 1993630 -64674375 - MLT1G LTR MaLR -2 593 1 358 300 61 22 chr20 1993712 1993950 -64674055 + L2 LINE L2 2750 2993 -279 263 191 0 0 chr20 1994175 1994222 -64673783 + L2 LINE L2 3262 3308 -5 511 321 115 46 chr20 1994632 1995538 -64672467 - L2 LINE L2 -35 3237 2268 209 203 68 0 chr20 1995962 1996021 -64671984 + MIR3 SINE MIR 119 181 -27 262 324 176 0 chr20 1996044 1996306 -64671699 + L2 LINE L2 1898 2205 -1109 438 20 0 0 chr20 1996514 1996565 -64671440 + (TC)n Simple_repeat Simple_repeat 2 52 0 4661 223 58 53 chr20 1996764 1997592 -64670413 + L1ME1 LINE L1 785 1608 -4798 1734 187 3 10 chr20 1997592 1997881 -64670124 + AluJo SINE Alu 1 287 -25 4661 223 58 53 chr20 1997881 1998270 -64669735 + L1ME1 LINE L1 1608 1994 -4412 2142 129 0 16 chr20 1998270 1998587 -64669418 + AluSx SINE Alu 1 312 0 4661 223 58 53 chr20 1998587 2000409 -64667596 + L1ME1 LINE L1 1994 3798 -2608 6528 159 35 9 chr20 2000432 2000775 -64667230 + Tigger3b DNA MER2_type 1 334 -2694 2479 35 3 7 chr20 2000775 2001116 -64666889 + AluY SINE Alu 1 311 0 6528 159 35 9 chr20 2001116 2001466 -64666539 + Tigger3b DNA MER2_type 334 673 -2355 2342 91 10 3 chr20 2001466 2001775 -64666230 + AluSp SINE Alu 1 311 -2 6528 159 35 9 chr20 2001775 2002280 -64665725 + Tigger3b DNA MER2_type 673 1231 0 261 167 0 0 chr20 2002301 2002355 -64665650 + (CA)n Simple_repeat Simple_repeat 1 54 0 5351 226 81 12 chr20 2002367 2004045 -64663960 + L1ME1 LINE L1 4052 5827 -599 883 286 71 15 chr20 2004054 2004393 -64663612 + L1ME1 LINE L1 6019 6376 -50 1066 205 136 33 chr20 2004433 2004764 -64663241 + HAL1b LINE L1 438 802 -546 1149 157 0 40 chr20 2004765 2004963 -64663042 + AluJo SINE Alu 84 273 -39 606 250 56 10 chr20 2004986 2005182 -64662823 + HAL1b LINE L1 792 996 -352 * 1256 194 17 35 chr20 2005173 2005461 -64662544 - L1MD3 LINE L1 -1 7994 7712 326 250 93 58 chr20 2005519 2005691 -64662314 - MLT1J LTR MaLR -331 180 3 350 231 11 11 chr20 2005984 2006075 -64661930 - MIR SINE MIR -3 259 169 310 291 0 0 chr20 2006080 2006159 -64661846 + L2 LINE L2 3219 3297 -16 242 200 0 18 chr20 2006184 2006239 -64661766 - MIR SINE MIR -112 150 97 181 293 133 28 chr20 2006397 2006578 -64661427 + L2 LINE L2 2776 2975 -339 2441 55 0 0 chr20 2006691 2007007 -64660998 - AluY SINE Alu 0 311 1 499 274 25 40 chr20 2007015 2007216 -64660789 + L2 LINE L2 3116 3313 0 191 258 0 31 chr20 2007222 2007350 -64660655 + (TGGA)n Simple_repeat Simple_repeat 4 127 0 271 287 22 44 chr20 2007948 2008084 -64659921 - L2 LINE L2 -4 3268 3136 532 239 71 92 chr20 2008101 2008340 -64659665 + MIR SINE MIR 14 247 -15 705 238 26 43 chr20 2008359 2008590 -64659415 - MIR SINE MIR -4 258 32 652 255 22 11 chr20 2009004 2009188 -64658817 - MIR SINE MIR -67 195 10 254 287 66 30 chr20 2009187 2009354 -64658651 - MIR SINE MIR -39 223 51 * 209 263 53 0 chr20 2010218 2010294 -64657711 + MER5B DNA MER1_type 52 131 -47 250 267 0 81 chr20 2010371 2010457 -64657548 + L2 LINE L2 3026 3104 -168 256 241 0 0 chr20 2010921 2010979 -64657026 + MLT1K LTR MaLR 196 253 -335 401 87 43 0 chr20 2010996 2011065 -64656940 - L1MA8 LINE L1 -2 6289 6218 462 168 32 0 chr20 2011177 2011271 -64656734 - MER2 DNA MER2_type -139 206 110 7904 158 101 20 chr20 2011271 2012816 -64655189 - MER52A LTR ERV1 0 1755 1 517 214 8 26 chr20 2012814 2012834 -64655171 - MER2 DNA MER2_type -230 115 96 * 1391 177 79 37 chr20 2012834 2013162 -64654843 + MER2 DNA MER2_type 2 343 -1 517 214 8 26 chr20 2013162 2013258 -64654747 - MER2 DNA MER2_type -249 96 1 3318 142 25 30 chr20 2013258 2013851 -64654154 - L1MA8 LINE L1 -70 6221 5632 487 297 38 71 chr20 2013927 2014193 -64653812 + MLT1K LTR MaLR 329 585 -3 1812 247 77 38 chr20 2014556 2015115 -64652890 - MLT1G LTR MaLR 0 590 10 1226 250 56 22 chr20 2015250 2015610 -64652395 - MLT1K LTR MaLR -1 587 216 813 276 99 38 chr20 2015661 2016128 -64651877 - L1ME4a LINE L1 -204 5917 5417 2330 96 0 7 chr20 2016128 2016431 -64651574 - AluSc SINE Alu -8 301 1 813 276 99 38 chr20 2016431 2016460 -64651545 - L1ME4a LINE L1 -704 5417 5391 279 198 49 49 chr20 2017183 2017264 -64650741 - MIR SINE MIR -95 167 87 270 0 0 0 chr20 2017488 2017518 -64650487 + (CA)n Simple_repeat Simple_repeat 1 30 0 601 274 87 10 chr20 2017943 2018151 -64649854 + MLT1K LTR MaLR 363 586 -2 715 312 64 11 chr20 2018299 2018581 -64649424 + HAL1 LINE L1 32 328 -2179 373 202 65 40 chr20 2018683 2018807 -64649198 + HAL1 LINE L1 615 741 -1766 880 248 103 78 chr20 2018995 2019624 -64648381 + L1MC4 LINE L1 7168 7808 0 539 248 35 0 chr20 2019673 2019814 -64648191 + MIR SINE MIR 91 236 -26 234 264 178 61 chr20 2020053 2020250 -64647755 + MLT1K LTR MaLR 62 281 -307 714 241 92 11 chr20 2020786 2021031 -64646974 + MIR SINE MIR 6 262 0 194 304 98 0 chr20 2021060 2021172 -64646833 - L2 LINE L2 -13 3259 3137 311 269 46 8 chr20 2021611 2021741 -64646264 + (TGGA)n Simple_repeat Simple_repeat 4 138 0 408 223 62 0 chr20 2021757 2022075 -64645930 + (TGGA)n Simple_repeat Simple_repeat 1 337 0 414 300 132 14 chr20 2022201 2022421 -64645584 - MIR SINE MIR 0 262 17 181 278 256 0 chr20 2022483 2022573 -64645432 - L2 LINE L2 -215 3057 2945 748 227 20 10 chr20 2022720 2022923 -64645082 - MIR SINE MIR -56 206 2 362 292 18 9 chr20 2023205 2023318 -64644687 + MIR3 SINE MIR 81 194 -14 787 255 123 13 chr20 2023887 2024122 -64643883 + MIR SINE MIR 2 262 0 589 198 16 0 chr20 2024213 2024334 -64643671 + MER5A DNA MER1_type 44 166 -23 214 224 168 37 chr20 2024406 2024513 -64643492 + MIR SINE MIR 76 196 -66 230 238 167 0 chr20 2024732 2024816 -64643189 + MIR SINE MIR 94 191 -71 334 264 66 0 chr20 2024837 2024943 -64643062 - L2 LINE L2 -21 3251 3139 1886 143 7 32 chr20 2025165 2025473 -64642532 - AluSx SINE Alu -12 300 1 185 338 38 12 chr20 2025506 2025586 -64642419 - L2 LINE L2 -544 2770 2689 2247 103 0 3 chr20 2025593 2025885 -64642120 + AluSx SINE Alu 5 295 -17 877 236 41 5 chr20 2025894 2026089 -64641916 + L1ME1 LINE L1 5471 5672 -494 1645 145 44 29 chr20 2026089 2026630 -64641375 + LTR36 LTR ERV1 1 611 0 1755 206 7 119 chr20 2026634 2027179 -64640826 + L1ME1 LINE L1 5671 6154 -12 252 241 80 9 chr20 2027226 2027338 -64640667 - L2 LINE L2 -674 2640 2521 368 316 129 0 chr20 2027889 2028044 -64639961 + MIR3 SINE MIR 13 187 -21 937 205 0 11 chr20 2028308 2028493 -64639512 + MER3 DNA MER1_type 2 184 -25 1064 247 11 127 chr20 2028535 2029062 -64638943 + LTR41 LTR ERVL 1 466 -307 1104 206 24 69 chr20 2029105 2029427 -64638578 + LTR41 LTR ERVL 468 795 0 683 317 63 59 chr20 2029751 2030679 -64637326 + ERVL LTR ERVL 412 1344 -4310 * 1585 273 16 16 chr20 2030677 2031115 -64636890 + ERVL LTR ERVL 4883 5321 -438 1705 178 7 7 chr20 2031115 2031396 -64636609 + AluJb SINE Alu 1 281 -31 1569 248 79 60 chr20 2031822 2032354 -64635651 + MLT1E LTR MaLR 1 542 -51 3783 194 49 11 chr20 2032386 2033180 -64634825 - L1MB7 LINE L1 -54 6130 5267 2234 127 3 0 chr20 2033180 2033487 -64634518 - AluSq SINE Alu -5 308 1 3783 194 49 11 chr20 2033487 2034042 -64633963 - L1MB7 LINE L1 -917 5267 4734 1003 194 60 187 chr20 2034111 2034865 -64633140 + LTR41 LTR ERVL 6 663 -110 1685 162 20 37 chr20 2035057 2035353 -64632652 - AluJo SINE Alu -21 291 1 2332 106 6 0 chr20 2035364 2035675 -64632330 - AluSq SINE Alu 0 313 1 1390 250 142 7 chr20 2035761 2036177 -64631828 - LTR16C LTR ERVL 0 491 20 244 182 45 45 chr20 2036186 2036252 -64631753 + MIR SINE MIR 112 177 -85 272 265 154 0 chr20 2036451 2036587 -64631418 - MIR SINE MIR -102 160 4 620 179 9 0 chr20 2037277 2037380 -64630625 + MLT1J1 LTR MaLR 13 116 -330 620 240 137 6 chr20 2037380 2037563 -64630442 + MER63B DNA MER1_type 1 207 -229 1014 303 17 7 chr20 2037631 2037925 -64630080 - LTR16A LTR ERVL -32 418 122 342 282 9 9 chr20 2037991 2038101 -64629904 - MIR SINE MIR -85 177 68 364 232 9 27 chr20 2038248 2038360 -64629645 - MARNA DNA Mariner -170 416 307 295 240 44 12 chr20 2038526 2038617 -64629388 + MIR SINE MIR 61 152 -61 685 282 70 25 chr20 2038634 2038875 -64629130 + MIR SINE MIR 8 259 -3 1870 259 57 18 chr20 2038985 2039480 -64628525 - MLT1G1 LTR MaLR -9 586 73 378 260 30 0 chr20 2039833 2039933 -64628072 + MIR SINE MIR 90 192 -70 416 165 89 101 chr20 2040159 2040317 -64627688 + L1ME4a LINE L1 5955 6110 -11 324 70 0 0 chr20 2040319 2040362 -64627643 + (CA)n Simple_repeat Simple_repeat 2 44 0 316 269 112 14 chr20 2040435 2040587 -64627418 - MER20B DNA MER1_type 0 219 53 295 283 173 37 chr20 2040589 2040780 -64627225 + L1MC4 LINE L1 7800 8016 -26 2404 65 0 14 chr20 2041457 2041749 -64626256 + AluY SINE Alu 1 288 -23 252 185 0 19 chr20 2041753 2041807 -64626198 - L2 LINE L2 -13 3259 3207 1972 232 23 0 chr20 2042042 2042469 -64625536 + MER110 LTR ERV1 46 482 -9 301 276 163 0 chr20 2042483 2042606 -64625399 - MIR SINE MIR -23 239 97 5874 101 3 27 chr20 2042606 2042753 -64625252 + L1PA11 LINE L1 5329 5478 -696 1459 214 3 35 chr20 2042753 2043071 -64624934 + AluJb SINE Alu 1 308 -4 5874 101 3 27 chr20 2043071 2043782 -64624223 + L1PA11 LINE L1 5478 6167 -7 328 250 0 0 chr20 2043782 2043866 -64624139 - MIR SINE MIR -163 99 16 1690 251 135 15 chr20 2043888 2044413 -64623592 - MLT1G1 LTR MaLR -7 588 1 580 296 97 8 chr20 2044619 2045041 -64622964 + LTR33 LTR ERVL 19 521 0 251 346 0 12 chr20 2045132 2045213 -64622792 - L2 LINE L2 -211 3061 2982 356 175 32 0 chr20 2045240 2045303 -64622702 - MIR SINE MIR -67 141 77 1213 209 106 9 chr20 2045508 2045829 -64622176 + L1ME3 LINE L1 4497 4848 -1298 1720 158 17 31 chr20 2045948 2046240 -64621765 + AluJo SINE Alu 12 299 -13 478 247 67 3 chr20 2046241 2046436 -64621569 + L1ME3 LINE L1 5771 5979 -183 2940 147 33 0 chr20 2046440 2046931 -64621074 + L1MB2 LINE L1 5319 5825 -346 5189 53 0 3 chr20 2046933 2047572 -64620433 + L1PA8 LINE L1 5536 6172 0 1890 161 14 11 chr20 2047572 2047919 -64620086 + L1MB2 LINE L1 5821 6169 -2 823 176 12 18 chr20 2047961 2048126 -64619879 + L1ME3 LINE L1 5998 6161 -1 670 277 106 25 chr20 2048139 2048421 -64619584 - MLT1L LTR MaLR -153 462 158 2085 113 7 0 chr20 2048478 2048808 -64619197 - AluSx SINE Alu 0 332 1 2305 88 3 3 chr20 2049308 2049603 -64618402 - AluSc SINE Alu -14 295 1 332 259 75 58 chr20 2049608 2049782 -64618223 - MER5B DNA MER1_type -1 177 1 2126 99 8 74 chr20 2050007 2050360 -64617645 + MER1B DNA MER1_type 1 330 -9 621 241 128 5 chr20 2050361 2050548 -64617457 + MLT1L LTR MaLR 400 609 -6 1310 191 40 20 chr20 2050552 2050804 -64617201 - AluJo SINE Alu -54 258 2 23 54 0 0 chr20 2050863 2050900 -64617105 + AT_rich Low_complexity Low_complexity 1 37 0 2136 139 0 0 chr20 2050978 2051273 -64616732 + AluSx SINE Alu 1 295 -17 888 245 64 19 chr20 2051896 2052161 -64615844 - L1ME4a LINE L1 -296 5825 5549 1074 149 11 0 chr20 2052714 2052895 -64615110 + L1MB3 LINE L1 6001 6183 0 11684 179 44 58 chr20 2052909 2055145 -64612860 + L1MC1 LINE L1 19 2283 -4143 2254 165 41 10 chr20 2055145 2055558 -64612447 - MSTA LTR MaLR 0 428 3 11684 179 44 58 chr20 2055558 2055778 -64612227 + L1MC1 LINE L1 2283 2504 -3922 2316 97 3 3 chr20 2055778 2056078 -64611927 + AluSg SINE Alu 2 301 -9 11684 179 44 58 chr20 2056078 2056228 -64611777 + L1MC1 LINE L1 2504 2654 -3772 2215 118 0 3 chr20 2056228 2056525 -64611480 + AluSc SINE Alu 1 296 -13 11684 179 44 58 chr20 2056525 2056717 -64611288 + L1MC1 LINE L1 2654 2847 -3579 2011 155 7 0 chr20 2056717 2057027 -64610978 + AluJo SINE Alu 1 312 0 11684 179 44 58 chr20 2057027 2057298 -64610707 + L1MC1 LINE L1 2847 3120 -3306 2304 104 3 0 chr20 2057298 2057595 -64610410 + AluSp SINE Alu 1 298 -15 11684 179 44 58 chr20 2057595 2057869 -64610136 + L1MC1 LINE L1 3120 3396 -3030 2162 137 0 3 chr20 2057869 2058176 -64609829 + AluSx SINE Alu 1 306 -6 11684 179 44 58 chr20 2058176 2058379 -64609626 + L1MC1 LINE L1 3396 3600 -2826 2216 112 0 7 chr20 2058379 2058682 -64609323 + AluSg SINE Alu 1 301 -9 11684 179 44 58 chr20 2058682 2059023 -64608982 + L1MC1 LINE L1 3600 3853 -2573 1714 168 0 30 chr20 2059033 2059513 -64608492 + AluJo SINE Alu 7 477 0 1637 223 216 59 chr20 2059548 2059960 -64608045 + L1MC1 LINE L1 3843 4189 -2237 816 161 23 0 chr20 2059960 2060090 -64607915 + FLAM_A SINE Alu 1 133 0 1637 223 216 59 chr20 2060090 2060665 -64607340 + L1MC1 LINE L1 4189 4985 -1441 235 229 16 0 chr20 2060678 2060739 -64607266 + L1MC1 LINE L1 4961 5022 -1404 542 138 0 0 chr20 2060756 2060836 -64607169 + FRAM SINE Alu 35 114 -62 315 0 0 0 chr20 2061185 2061220 -64606785 + (CA)n Simple_repeat Simple_repeat 2 36 0 6442 171 16 28 chr20 2061223 2062828 -64605177 + L1MC1 LINE L1 5023 6613 0 561 30 0 0 chr20 2062868 2062935 -64605070 + (TA)n Simple_repeat Simple_repeat 2 68 0 1287 107 6 0 chr20 2062935 2063113 -64604892 - AluSq SINE Alu -1 312 134 2271 48 25 67 chr20 2063113 2063428 -64604577 - AluY SINE Alu -9 302 1 2296 111 0 0 chr20 2063567 2063873 -64604132 + AluSg SINE Alu 1 306 -4 342 307 24 8 chr20 2064189 2064316 -64603689 - LTR67 LTR ERVL -2 555 427 248 291 45 55 chr20 2064418 2064528 -64603477 + LTR16C LTR ERVL 87 195 -296 598 267 46 20 chr20 2064570 2064765 -64603240 + LTR16C LTR ERVL 284 483 -8 526 292 36 105 chr20 2064767 2065205 -64602800 - LTR67 LTR ERVL -126 431 24 336 368 23 18 chr20 2065722 2065893 -64602112 - L2 LINE L2 -214 3058 2887 589 292 103 80 chr20 2066147 2066856 -64601149 - HAL1 LINE L1 -1606 901 177 319 137 0 95 chr20 2067017 2067112 -64600893 + L1MB2 LINE L1 6082 6167 -4 819 201 0 0 chr20 2067299 2067443 -64600562 + MER5A DNA MER1_type 9 152 -37 462 303 31 6 chr20 2067614 2067776 -64600229 - MIR SINE MIR -5 257 92 2352 98 0 0 chr20 2067845 2068140 -64599865 - AluSc SINE Alu -14 295 1 211 296 31 31 chr20 2068212 2068310 -64599695 + L2 LINE L2 2979 3076 -196 4998 180 67 22 chr20 2068398 2068510 -64599495 + L1MD2 LINE L1 4921 5027 -1332 1734 173 3 26 chr20 2068510 2068817 -64599188 - AluJo SINE Alu -12 300 1 4998 180 67 22 chr20 2068817 2069259 -64598746 + L1MD2 LINE L1 5027 5448 -911 2350 99 0 0 chr20 2069259 2069552 -64598453 + AluSx SINE Alu 1 293 -19 4998 180 67 22 chr20 2069552 2070272 -64597733 + L1MD2 LINE L1 5448 6252 -107 401 113 32 0 chr20 2070311 2070373 -64597632 + L1MC/D LINE L1 5504 5567 -675 521 105 47 0 chr20 2070378 2070464 -64597541 + L1MD2 LINE L1 6266 6355 -4 1688 168 67 101 chr20 2070465 2070779 -64597226 - Charlie1b DNA MER1_type -2289 472 178 1334 184 21 0 chr20 2070779 2071013 -64596992 - MER8 DNA MER2_type 0 239 1 1688 168 67 101 chr20 2071013 2071174 -64596831 - Charlie1b DNA MER1_type -2583 178 13 210 178 22 0 chr20 2071233 2071278 -64596727 + L2 LINE L2 3188 3233 -39 213 132 0 0 chr20 2071280 2071318 -64596687 + (GA)n Simple_repeat Simple_repeat 2 39 0 727 313 144 18 chr20 2072136 2072475 -64595530 - MLT1J LTR MaLR -31 480 99 802 144 83 72 chr20 2072684 2072808 -64595197 - MER5A DNA MER1_type 0 189 61 2251 105 13 3 chr20 2072808 2073114 -64594891 - AluSc SINE Alu 0 309 1 802 144 83 72 chr20 2073114 2073170 -64594835 - MER5A DNA MER1_type -128 61 7 807 269 96 15 chr20 2073568 2073903 -64594102 + L1MC4a LINE L1 5455 5816 -1992 250 241 0 72 chr20 2073990 2074073 -64593932 + L1MC4a LINE L1 6057 6133 -1675 282 255 217 0 chr20 2074115 2074221 -64593784 - MIR SINE MIR -37 225 97 749 232 24 6 chr20 2074241 2074405 -64593600 + MER63A DNA MER1_type 39 205 -5 368 254 55 9 chr20 2074850 2074960 -64593045 + MIR SINE MIR 36 150 -112 2152 116 30 3 chr20 2075013 2075314 -64592691 + AluJb SINE Alu 1 309 -3 22 0 0 0 chr20 2075962 2075984 -64592021 + AT_rich Low_complexity Low_complexity 1 22 0 2470 78 0 13 chr20 2076305 2076614 -64591391 - AluSx SINE Alu -7 305 1 569 223 157 6 chr20 2076615 2076781 -64591224 + MIR SINE MIR 72 262 0 270 328 141 8 chr20 2076798 2076926 -64591079 + L2 LINE L2 3119 3263 -9 204 271 0 0 chr20 2077190 2077238 -64590767 + L2 LINE L2 3266 3313 0 603 272 59 25 chr20 2077488 2077727 -64590278 + MIR SINE MIR 15 261 -1 443 244 80 63 chr20 2077885 2077934 -64590071 - L1ME LINE L1 -352 5769 5722 189 0 0 0 chr20 2077934 2077955 -64590050 + (TA)n Simple_repeat Simple_repeat 1 21 0 443 244 80 63 chr20 2077955 2078143 -64589862 - L1ME LINE L1 -399 5722 5528 237 269 15 0 chr20 2078564 2078631 -64589374 - MER113 DNA MER1_type? 0 521 454 1051 200 130 82 chr20 2078732 2079232 -64588773 - HAL1 LINE L1 -4 2503 1980 787 211 5 52 chr20 2079301 2079495 -64588510 + MER5A DNA MER1_type 2 186 -3 324 357 23 29 chr20 2079501 2079611 -64588394 + MIR SINE MIR 12 122 -140 1909 153 7 0 chr20 2079611 2079905 -64588100 - AluSx SINE Alu -16 296 1 324 357 23 29 chr20 2079905 2079965 -64588040 + MIR SINE MIR 122 181 -81 211 133 0 0 chr20 2080636 2080666 -64587339 + L2 LINE L2 3222 3251 -21 585 273 134 34 chr20 2080674 2080967 -64587038 + L2 LINE L2 2782 3044 -269 2394 95 3 0 chr20 2080967 2081271 -64586734 - AluSp SINE Alu -8 305 1 585 273 134 34 chr20 2081271 2081472 -64586533 + L2 LINE L2 3044 3311 -2 1974 136 3 32 chr20 2081646 2081954 -64586051 + AluSx SINE Alu 1 299 -13 361 212 195 0 chr20 2082194 2082312 -64585693 + MIR SINE MIR 120 260 -2 1716 119 50 26 chr20 2082498 2082800 -64585205 + L1PA16 LINE L1 5849 6157 -9 1475 128 144 4 chr20 2082816 2083066 -64584939 + AluJb SINE Alu 1 285 -17 22 35 0 0 chr20 2083303 2083332 -64584673 + AT_rich Low_complexity Low_complexity 1 29 0 481 245 98 0 chr20 2083361 2083504 -64584501 - L1ME2 LINE L1 -114 6050 5894 1777 220 89 55 chr20 2083520 2084125 -64583880 - L1ME1 LINE L1 -5 6161 5536 291 346 55 0 chr20 2084139 2084266 -64583739 + L2 LINE L2 2912 3045 -268 737 112 16 48 chr20 2084266 2084391 -64583614 + MLT1B LTR MaLR 1 121 -269 4723 108 21 16 chr20 2084395 2085158 -64582847 + L1 LINE L1 3870 4636 -1510 1314 210 45 13 chr20 2085182 2085492 -64582513 + L1MC4 LINE L1 7165 7484 -558 1806 169 51 30 chr20 2085537 2085970 -64582035 + L1MC4 LINE L1 7470 7911 -131 246 105 18 73 chr20 2085971 2086036 -64581969 - L1M1 LINE L1 -603 5702 5641 231 250 70 23 chr20 2086070 2086198 -64581807 + L1MC4 LINE L1 7903 8036 -6 230 241 17 0 chr20 2086389 2086447 -64581558 - MIR SINE MIR -122 140 82 369 300 50 8 chr20 2086453 2086573 -64581432 + L2 LINE L2 3179 3303 -10 253 278 2 64 chr20 2086741 2086872 -64581133 - MIR SINE MIR -52 156 33 23 0 0 0 chr20 2088254 2088277 -64579728 + GC_rich Low_complexity Low_complexity 1 23 0 1855 156 0 13 chr20 2090158 2090460 -64577545 + AluJb SINE Alu 1 298 -14 317 282 100 53 chr20 2090775 2090945 -64577060 + MIR SINE MIR 2 179 -83 288 270 0 0 chr20 2091524 2091587 -64576418 - MIR3 SINE MIR -17 191 129 283 374 76 8 chr20 2092137 2092268 -64575737 - MIR3 SINE MIR -29 179 40 585 296 25 6 chr20 2093262 2093424 -64574581 - MIR SINE MIR -96 166 2 223 282 73 48 chr20 2093424 2093490 -64574515 + MIR SINE MIR 86 154 -108 2243 97 7 3 chr20 2093514 2093813 -64574192 + AluSx SINE Alu 1 300 -12 347 349 72 12 chr20 2094743 2094909 -64573096 - MIR SINE MIR -70 192 17 376 272 66 103 chr20 2094997 2095210 -64572795 - MIR SINE MIR -36 226 22 250 224 45 15 chr20 2096214 2096281 -64571724 + MIR SINE MIR 92 160 -102 229 267 151 20 chr20 2096523 2096669 -64571336 + MER104 DNA Tc2 4 168 -12 1680 161 20 26 chr20 2096700 2097005 -64571000 + AluJo SINE Alu 1 303 -9 264 278 180 41 chr20 2097824 2098018 -64569987 + MIR SINE MIR 23 243 -19 1347 225 44 16 chr20 2098202 2098518 -64569487 - ERVL LTR ERVL -3552 2212 1888 24 32 0 0 chr20 2098619 2098650 -64569355 + AT_rich Low_complexity Low_complexity 1 31 0 242 193 15 176 chr20 2099079 2099201 -64568804 - MIR3 SINE MIR -51 157 84 236 365 0 14 chr20 2099255 2099329 -64568676 - MIR SINE MIR -120 88 16 721 189 0 0 chr20 2099622 2099744 -64568261 + FRAM SINE Alu 38 159 -17 2109 133 0 29 chr20 2102717 2103032 -64564973 - AluSx SINE Alu -6 306 1 221 240 0 20 chr20 2103203 2103253 -64564752 - L2 LINE L2 -212 3060 3012 345 255 122 11 chr20 2103425 2103613 -64564392 - L1ME4a LINE L1 -237 5884 5676 2119 60 0 8 chr20 2103632 2103883 -64564122 + AluY SINE Alu 47 295 -16 1558 117 20 137 chr20 2103911 2104305 -64563700 + MER7A DNA MER2_type 1 346 0 213 379 11 11 chr20 2104307 2104394 -64563611 - L2 LINE L2 -50 3222 3136 190 285 278 7 chr20 2104551 2104702 -64563303 - L2 LINE L2 -265 3007 2816 1992 241 203 31 chr20 2105958 2107219 -64560786 - L2 LINE L2 0 3313 1791 426 216 60 0 chr20 2107219 2107335 -64560670 - Charlie1 DNA MER1_type 0 2761 2639 1968 138 7 7 chr20 2107337 2107634 -64560371 + AluSx SINE Alu 1 297 -15 436 298 21 7 chr20 2107835 2107976 -64560029 + MIR SINE MIR 50 192 -70 335 260 104 0 chr20 2109286 2109382 -64558623 - MIR SINE MIR -155 107 2 199 272 231 23 chr20 2110610 2110783 -64557222 - MIR SINE MIR -32 230 22 717 193 139 6 chr20 2113332 2113498 -64554507 + MER5A DNA MER1_type 1 188 -1 2069 96 59 0 chr20 2114139 2114410 -64553595 - AluSc SINE Alu -22 287 1 206 211 0 0 chr20 2114467 2114505 -64553500 - L2 LINE L2 -9 3263 3226 188 394 56 0 chr20 2114557 2114699 -64553306 + MIR SINE MIR 107 256 -6 331 321 88 51 chr20 2114838 2115112 -64552893 - L2 LINE L2 -19 3253 2970 404 293 160 26 chr20 2115160 2115467 -64552538 - L2 LINE L2 -625 2689 2342 2398 96 110 217 chr20 2116330 2116619 -64551386 - Tigger3(Golem) DNA MER2_type -3 3026 2708 804 153 0 8 chr20 2116619 2116743 -64551262 + FLAM_C SINE Alu 1 123 -20 2398 96 110 217 chr20 2116743 2117023 -64550982 - Tigger3(Golem) DNA MER2_type -321 2708 2433 638 211 75 14 chr20 2117023 2117170 -64550835 - FAM SINE Alu -19 156 1 2398 96 110 217 chr20 2117170 2117302 -64550703 - Tigger3(Golem) DNA MER2_type -596 2433 2289 226 353 0 12 chr20 2117378 2117463 -64550542 - MIR SINE MIR -91 117 34 390 270 70 0 chr20 2118062 2118162 -64549843 + MIR SINE MIR 30 136 -72 1320 92 0 0 chr20 2119401 2119565 -64548440 + AluSg/x SINE Alu 137 300 -12 253 241 69 35 chr20 2119628 2119715 -64548290 - L3 LINE CR1 -189 1388 1299 2496 79 0 0 chr20 2119896 2120199 -64547806 + AluSx SINE Alu 1 303 -9 1871 108 58 0 chr20 2120868 2121128 -64546877 + AluSx SINE Alu 1 275 -37 913 182 45 0 chr20 2121137 2121291 -64546714 + AluJb SINE Alu 132 292 -20 198 371 133 0 chr20 2121540 2121645 -64546360 + MIR SINE MIR 16 134 -74 288 298 91 8 chr20 2121680 2121801 -64546204 + MIR SINE MIR 5 135 -127 202 267 67 0 chr20 2122530 2122590 -64545415 - MIR SINE MIR -58 150 87 282 79 0 0 chr20 2123278 2123316 -64544689 + MIR SINE MIR 113 150 -112 372 320 145 5 chr20 2123655 2123855 -64544150 - MIR SINE MIR -15 247 20 1828 146 7 42 chr20 2124022 2124331 -64543674 + AluJo SINE Alu 1 298 -14 620 271 91 35 chr20 2124801 2125000 -64543005 + MIR SINE MIR 17 226 -36 239 274 73 81 chr20 2125276 2125400 -64542605 + MIR SINE MIR 21 141 -67 254 312 157 39 chr20 2127008 2127364 -64540641 - L1ME4a LINE L1 -195 5926 5529 1688 143 0 4 chr20 2127805 2128050 -64539955 + AluJo SINE Alu 45 288 -24 334 266 305 20 chr20 2128274 2128477 -64539528 - MIR SINE MIR 0 262 2 199 250 117 0 chr20 2128576 2128636 -64539369 + MIR SINE MIR 113 179 -83 473 225 101 14 chr20 2128798 2128936 -64539069 + MIR SINE MIR 33 182 -80 240 224 0 0 chr20 2129207 2129274 -64538731 + T-rich Low_complexity Low_complexity 1 67 0 222 322 33 41 chr20 2133999 2134120 -64533885 - MIR SINE MIR -116 146 27 238 269 228 18 chr20 2134606 2134777 -64533228 + MIR SINE MIR 38 244 -18 484 182 71 0 chr20 2135200 2135299 -64532706 - L1MB7 LINE L1 -43 6141 6036 24 32 0 0 chr20 2135711 2135742 -64532263 + AT_rich Low_complexity Low_complexity 1 31 0 406 219 41 96 chr20 2137750 2137896 -64530109 - FLAM_A SINE Alu -4 138 1 309 161 0 0 chr20 2137972 2138028 -64529977 - Charlie5 DNA MER1_type 0 2624 2569 321 286 0 51 chr20 2188233 2188331 -64479674 + MIR3 SINE MIR 113 205 -3 * 368 290 28 0 chr20 2188326 2188433 -64479572 + MIR3 SINE MIR 85 194 -14 2322 112 0 0 chr20 2188467 2188772 -64479233 - AluSx SINE Alu -7 305 1 521 301 107 5 chr20 2189630 2189836 -64478169 + MIR SINE MIR 1 227 -35 484 232 30 77 chr20 2190011 2190179 -64477826 - MIR SINE MIR -56 206 47 2358 107 0 0 chr20 2190421 2190731 -64477274 + AluSx SINE Alu 1 310 -2 428 267 44 84 chr20 2190830 2191126 -64476879 + L3 LINE CR1 1101 1384 -193 817 176 0 0 chr20 2191177 2191302 -64476703 - FLAM_C SINE Alu -18 125 1 265 232 63 53 chr20 2191328 2191423 -64476582 - L2 LINE L2 -52 3220 3125 2314 104 0 3 chr20 2191500 2191797 -64476208 + AluSq SINE Alu 3 298 -15 459 337 87 0 chr20 2192326 2192498 -64475507 - MIR3 SINE MIR -65 143 2 2202 106 20 3 chr20 2192625 2192918 -64475087 - AluSx SINE Alu -14 298 1 22 0 0 0 chr20 2192922 2192944 -64475061 + AT_rich Low_complexity Low_complexity 1 22 0 268 307 193 9 chr20 2192963 2193077 -64474928 - MIR SINE MIR -32 230 96 639 216 207 19 chr20 2193582 2193790 -64474215 + MIR SINE MIR 16 262 0 277 367 93 0 chr20 2193839 2193978 -64474027 - L2 LINE L2 0 3272 3121 276 278 146 28 chr20 2196333 2196477 -64471528 - MIR3 SINE MIR -25 183 23 272 318 159 8 chr20 2196541 2196667 -64471338 + MIR3 SINE MIR 47 191 -17 180 275 0 72 chr20 2196934 2197003 -64471002 + L2 LINE L2 3209 3272 0 187 295 95 32 chr20 2197005 2197100 -64470905 - L2 LINE L2 -19 3253 3153 587 276 43 0 chr20 2198267 2198430 -64469575 + MIR SINE MIR 1 170 -92 227 180 0 40 chr20 2198825 2198875 -64469130 + MIR SINE MIR 99 146 -62 280 183 0 50 chr20 2198981 2199041 -64468964 - MER5B DNA MER1_type -1 177 121 1971 156 6 34 chr20 2199041 2199361 -64468644 + AluSx SINE Alu 1 311 -1 602 136 0 30 chr20 2199383 2199515 -64468490 + (GAAA)n Simple_repeat Simple_repeat 1 128 0 336 295 80 18 chr20 2199515 2199627 -64468378 - MER5B DNA MER1_type -59 119 1 566 301 46 20 chr20 2199821 2200017 -64467988 + MIR SINE MIR 46 246 -16 271 312 0 64 chr20 2200140 2200249 -64467756 - MIR SINE MIR -74 188 87 203 244 67 84 chr20 2200555 2200674 -64467331 + MIR3 SINE MIR 44 160 -48 618 255 88 8 chr20 2200674 2200913 -64467092 - MER112 DNA MER1_type -1 259 2 2301 102 0 0 chr20 2200933 2201226 -64466779 - AluSx SINE Alu -19 293 1 598 231 60 82 chr20 2201620 2201902 -64466103 - MLT1J LTR MaLR -12 499 224 2388 148 30 70 chr20 2201948 2202243 -64465762 + L1MB5 LINE L1 5652 5917 -257 2350 96 3 6 chr20 2202243 2202555 -64465450 + AluSx SINE Alu 1 311 -1 2388 148 30 70 chr20 2202555 2202798 -64465207 + L1MB5 LINE L1 5917 6168 -6 220 209 99 55 chr20 2203113 2203204 -64464801 + MIR3 SINE MIR 89 183 -25 2772 203 96 41 chr20 2203890 2204650 -64463355 - MER21B LTR ERV1 -57 806 5 399 223 21 11 chr20 2204656 2204750 -64463255 + MIR SINE MIR 47 141 -121 421 346 86 7 chr20 2204932 2205147 -64462858 + MIR SINE MIR 18 248 -14 2280 134 0 6 chr20 2205688 2206002 -64462003 - AluSx SINE Alu 0 312 1 186 143 0 0 chr20 2206372 2206407 -64461598 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 213 245 0 0 chr20 2207064 2207113 -64460892 + (TTTA)n Simple_repeat Simple_repeat 4 52 0 1933 158 0 3 chr20 2207165 2207468 -64460537 + AluJb SINE Alu 1 302 -10 2207 120 0 3 chr20 2208102 2208403 -64459602 - AluSq SINE Alu -12 301 2 252 383 33 0 chr20 2208522 2208642 -64459363 - L2 LINE L2 -245 3027 2904 379 314 39 13 chr20 2209128 2209284 -64458721 + MIR3 SINE MIR 22 181 -27 264 292 37 14 chr20 2209785 2209918 -64458087 + MIR SINE MIR 64 200 -62 417 333 71 7 chr20 2210472 2210613 -64457392 - L2 LINE L2 -1 3271 3122 592 258 48 48 chr20 2210971 2211223 -64456782 - L2 LINE L2 -166 3147 2896 2396 102 10 0 chr20 2211343 2211647 -64456358 + AluSx SINE Alu 1 307 -5 274 259 106 12 chr20 2211657 2211742 -64456263 - MIR3 SINE MIR -22 186 94 32 0 0 0 chr20 2211828 2211860 -64456145 + AT_rich Low_complexity Low_complexity 1 32 0 442 323 71 9 chr20 2212285 2212511 -64455494 - MIR SINE MIR -9 253 14 284 265 128 0 chr20 2212712 2212814 -64455191 - MIR3 SINE MIR -51 157 43 234 171 0 0 chr20 2212838 2212908 -64455097 + (CA)n Simple_repeat Simple_repeat 2 71 0 1695 168 0 59 chr20 2212974 2213122 -64454883 + AluJo SINE Alu 3 125 -187 1704 172 35 14 chr20 2213122 2213412 -64454593 + AluJb SINE Alu 4 299 -13 1695 168 0 59 chr20 2213412 2213567 -64454438 + AluJo SINE Alu 125 288 -24 1489 192 66 0 chr20 2213639 2213750 -64454255 + AluJo SINE Alu 4 106 -206 402 21 0 0 chr20 2213750 2213797 -64454208 + (CA)n Simple_repeat Simple_repeat 2 48 0 1489 192 66 0 chr20 2213797 2213956 -64454049 + AluJo SINE Alu 106 292 -20 212 294 44 0 chr20 2214841 2214909 -64453096 - MIR3 SINE MIR -26 182 112 275 209 42 49 chr20 2214985 2215091 -64452914 - MIR SINE MIR -73 135 42 523 246 67 58 chr20 2215095 2215319 -64452686 - L1MC5 LINE L1 -30 7931 7706 195 232 0 0 chr20 2215400 2215456 -64452549 + (TGAA)n Simple_repeat Simple_repeat 1 56 0 1827 144 62 0 chr20 2215523 2215815 -64452190 + AluSx SINE Alu 1 310 -2 36 0 0 0 chr20 2215815 2215851 -64452154 + AT_rich Low_complexity Low_complexity 1 36 0 293 0 0 26 chr20 2217148 2217186 -64450819 + (TA)n Simple_repeat Simple_repeat 1 37 0 2250 113 3 0 chr20 2217252 2217544 -64450461 - AluSq SINE Alu -20 293 1 181 250 0 0 chr20 2218733 2218765 -64449240 - MIR SINE MIR -139 69 38 554 257 56 50 chr20 2219026 2219205 -64448800 + MIR3 SINE MIR 22 201 -7 543 190 141 68 chr20 2219515 2219678 -64448327 - MIR SINE MIR -6 256 82 210 383 25 0 chr20 2219704 2219785 -64448220 + MIR3 SINE MIR 84 166 -42 222 313 26 61 chr20 2220617 2220732 -64447273 - L2 LINE L2 -210 3062 2952 25 0 0 0 chr20 2221404 2221429 -64446576 + AT_rich Low_complexity Low_complexity 1 25 0 360 169 8 89 chr20 2221634 2221758 -64446247 - L1ME4a LINE L1 -222 5899 5786 737 206 24 12 chr20 2221826 2221991 -64446014 + MIR SINE MIR 39 205 -57 1592 246 65 56 chr20 2222295 2223156 -64444849 - L1PB1 LINE L1 -1 6150 5282 1817 263 133 25 chr20 2223274 2224185 -64443820 - L1ME LINE L1 -5056 1014 6 513 317 112 18 chr20 2224756 2224980 -64443025 + MIR SINE MIR 9 253 -9 212 180 45 112 chr20 2225015 2225104 -64442901 + MIR SINE MIR 69 151 -57 1932 143 7 7 chr20 2225792 2226085 -64441920 + AluSx SINE Alu 1 293 -19 511 181 66 163 chr20 2226250 2226414 -64441591 - MER112 DNA MER1_type 0 260 133 2284 59 0 24 chr20 2226414 2226725 -64441280 + AluY SINE Alu 1 304 0 511 181 66 163 chr20 2226725 2226847 -64441158 - MER112 DNA MER1_type -127 133 1 189 0 0 0 chr20 2226849 2226870 -64441135 + (TCTA)n Simple_repeat Simple_repeat 1 21 0 396 315 103 5 chr20 2228145 2228329 -64439676 - MARNA DNA Mariner -84 502 301 260 318 11 11 chr20 2228711 2228799 -64439206 - L2 LINE L2 -1 3271 3184 565 315 104 14 chr20 2228859 2229081 -64438924 + MIR SINE MIR 8 249 -13 182 299 86 81 chr20 2229709 2229883 -64438122 + MIR3 SINE MIR 2 176 -32 2324 110 0 22 chr20 2229949 2230268 -64437737 + AluSx SINE Alu 1 312 0 317 270 53 112 chr20 2231873 2232025 -64435980 - MIR SINE MIR -65 143 1 1847 130 41 54 chr20 2232605 2232921 -64435084 - AluJo SINE Alu 0 312 1 239 309 111 25 chr20 2232987 2233149 -64434856 + MIR3 SINE MIR 4 179 -29 982 106 8 0 chr20 2233888 2234020 -64433985 + FLAM_C SINE Alu 1 133 -10 257 323 219 0 chr20 2235036 2235191 -64432814 - MIR3 SINE MIR 0 208 20 282 338 58 19 chr20 2235964 2236118 -64431887 + MIR SINE MIR 13 172 -90 * 447 309 72 30 chr20 2236115 2236351 -64431654 + L2 LINE L2 3024 3269 -44 2317 85 7 3 chr20 2236662 2236957 -64431048 + AluSx SINE Alu 1 296 -16 215 269 51 13 chr20 2237828 2237906 -64430099 + MIR SINE MIR 63 143 -119 263 223 146 29 chr20 2238066 2238169 -64429836 - MIR3 SINE MIR -27 181 67 206 351 36 0 chr20 2238316 2238427 -64429578 + L3 LINE CR1 1084 1198 -379 880 165 0 0 chr20 2238580 2238707 -64429298 + FLAM_C SINE Alu 1 127 -16 420 212 278 10 chr20 2240375 2240573 -64427432 + L3 LINE CR1 1212 1462 -115 649 165 0 19 chr20 2241199 2241302 -64426703 + FRAM SINE Alu 60 160 -16 2444 282 35 27 chr20 2241387 2242156 -64425849 + HERV16 LTR ERVL 555 1329 -3667 1795 233 66 11 chr20 2242156 2242351 -64425654 + L1MEc LINE L1 1866 2049 -4166 1997 166 3 6 chr20 2242351 2242664 -64425341 + AluSx SINE Alu 1 312 0 2142 143 0 0 chr20 2242667 2242974 -64425031 + AluSx SINE Alu 1 307 -5 1795 233 66 11 chr20 2242974 2243430 -64424575 + L1MEc LINE L1 2050 2518 -3697 1812 223 82 41 chr20 2243436 2243724 -64424281 + L1MEc LINE L1 2854 3129 -3086 2239 111 3 0 chr20 2243724 2244031 -64423974 + AluSp SINE Alu 1 308 -5 1812 223 82 41 chr20 2244031 2244303 -64423702 + L1MEc LINE L1 3129 3449 -2766 1808 160 48 0 chr20 2244303 2244597 -64423408 + AluJb SINE Alu 1 308 -4 1812 223 82 41 chr20 2244597 2244720 -64423285 + L1MEc LINE L1 3449 3566 -2649 289 247 215 0 chr20 2244727 2244820 -64423185 + MLT1H LTR MaLR 421 533 -16 204 330 26 110 chr20 2244870 2245143 -64422862 + L2 LINE L2 2998 3247 -25 753 230 82 4 chr20 2245217 2245446 -64422559 - MIR SINE MIR -2 260 16 194 247 86 12 chr20 2245822 2245903 -64422102 - MIR SINE MIR -65 197 111 1275 95 0 0 chr20 2246664 2246832 -64421173 - AluY SINE Alu -13 298 131 924 254 194 12 chr20 2247135 2247770 -64420235 - L2 LINE L2 -124 3189 2432 1297 270 137 35 chr20 2248294 2248490 -64419515 + MLT1G1 LTR MaLR 1 176 -419 531 0 0 0 chr20 2248490 2248549 -64419456 + (TC)n Simple_repeat Simple_repeat 1 59 0 1297 270 137 35 chr20 2248549 2248892 -64419113 + MLT1G1 LTR MaLR 176 595 0 333 278 156 23 chr20 2249313 2249486 -64418519 - L2 LINE L2 0 3313 3118 353 336 39 0 chr20 2249855 2249983 -64418022 - LTR67 LTR ERVL -315 242 110 267 275 34 98 chr20 2249990 2250226 -64417779 + MLT1J LTR MaLR 267 487 -24 270 284 0 14 chr20 2250339 2250413 -64417592 - MER5A DNA MER1_type -6 183 111 216 239 14 42 chr20 2250358 2250429 -64417576 + MER5A DNA MER1_type 37 105 -84 * 941 217 39 5 chr20 2250657 2250860 -64417145 + MIR SINE MIR 39 248 -14 992 0 0 9 chr20 2251314 2251427 -64416578 + AluY SINE Alu 198 309 -2 2229 106 3 26 chr20 2251816 2252127 -64415878 + AluSx SINE Alu 5 308 -4 465 225 1 25 chr20 2252246 2252380 -64415625 + L1MC5 LINE L1 7808 8042 0 2801 251 98 29 chr20 2252433 2254325 -64413680 + L1M4 LINE L1 48 2151 -4495 * 2971 180 82 15 chr20 2254315 2255103 -64412902 + L1MB3 LINE L1 4724 5593 -590 1525 134 14 28 chr20 2255107 2255390 -64412615 + L1MB3 LINE L1 5904 6182 -1 871 275 36 18 chr20 2255422 2255808 -64412197 + L1M4 LINE L1 2265 2657 -3989 802 286 97 19 chr20 2256218 2256589 -64411416 + LTR16C LTR ERVL 92 491 0 377 310 179 14 chr20 2256764 2257116 -64410889 - L2 LINE L2 -765 2549 2140 534 144 29 93 chr20 2257860 2257922 -64410083 - L1ME3 LINE L1 -3 6159 6095 6514 98 23 2 chr20 2257922 2259539 -64408466 - L1PA15 LINE L1 0 6165 4528 534 144 29 93 chr20 2259539 2259615 -64408390 - L1ME3 LINE L1 -67 6095 6030 1492 177 0 4 chr20 2259647 2259918 -64408087 - L1MB3 LINE L1 -2 6181 5912 10269 157 71 8 chr20 2259920 2261909 -64406096 - L1M4c LINE L1 -4173 2211 2 1742 167 13 23 chr20 2262104 2262404 -64405601 - AluJo SINE Alu -15 297 1 657 279 61 39 chr20 2262519 2262799 -64405206 - MER115 DNA AcHobo -1 692 407 1150 227 52 0 chr20 2262831 2263082 -64404923 + L1MDb LINE L1 8 271 -6138 207 0 0 0 chr20 2263119 2263142 -64404863 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1726 214 43 0 chr20 2263160 2263534 -64404471 - L1MD1 LINE L1 -359 5883 5494 2506 176 28 35 chr20 2263534 2263763 -64404242 + L1MD2 LINE L1 5819 6048 -311 2443 84 0 0 chr20 2263763 2264062 -64403943 + AluY SINE Alu 1 299 -12 2506 176 28 35 chr20 2264062 2264377 -64403628 + L1MD2 LINE L1 6048 6359 0 718 326 48 22 chr20 2264377 2264650 -64403355 - MER115 DNA AcHobo -324 369 90 1205 232 103 49 chr20 2264779 2264807 -64403198 + MLT1E3 LTR MaLR 4 29 -595 1574 211 133 42 chr20 2264807 2265240 -64402765 + MLT2B1 LTR ERVL 3 484 -36 234 0 0 0 chr20 2265240 2265266 -64402739 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 1574 211 133 42 chr20 2265266 2265307 -64402698 + MLT2B1 LTR ERVL 484 520 0 1205 232 103 49 chr20 2265307 2265812 -64402193 + MLT1E3 LTR MaLR 29 573 -51 2179 100 28 3 chr20 2266024 2266313 -64401692 + AluSq SINE Alu 1 296 -17 2315 192 50 52 chr20 2266496 2267079 -64400926 - L1MB5 LINE L1 -7 6167 5586 278 174 0 0 chr20 2267092 2267138 -64400867 + MLT1E3 LTR MaLR 560 605 -19 4414 236 56 119 chr20 2267153 2268899 -64399106 - HAL1 LINE L1 -128 2379 827 1644 183 20 7 chr20 2268899 2269205 -64398800 + AluJo SINE Alu 1 310 -2 4414 236 56 119 chr20 2269205 2269871 -64398134 - HAL1 LINE L1 -1680 827 120 448 313 5 21 chr20 2270722 2270940 -64397065 + MIR SINE MIR 7 254 -8 308 355 6 6 chr20 2271804 2271970 -64396035 - LTR67 LTR ERVL -356 201 36 846 152 0 8 chr20 2271981 2272113 -64395892 + FLAM_A SINE Alu 1 131 -2 327 248 35 106 chr20 2272182 2272408 -64395597 - L1MC4 LINE L1 -1 8041 7832 833 195 40 40 chr20 2272460 2272660 -64395345 - L1ME2 LINE L1 -19 6145 5946 1330 179 0 41 chr20 2272843 2273089 -64394916 + AluJo SINE Alu 1 236 -76 186 208 0 4 chr20 2273998 2274052 -64393953 - MIR SINE MIR -65 143 100 1794 156 17 61 chr20 2274446 2274856 -64393149 - Charlie1b DNA MER1_type 0 523 132 30 27 0 0 chr20 2274986 2275023 -64392982 + AT_rich Low_complexity Low_complexity 1 37 0 1952 107 52 21 chr20 2275025 2275314 -64392691 + AluSx SINE Alu 1 298 -14 940 212 78 0 chr20 2275876 2276093 -64391912 - MIR SINE MIR 0 262 29 2311 104 0 0 chr20 2276387 2276685 -64391320 + AluSq SINE Alu 1 298 -15 709 155 39 16 chr20 2276855 2276984 -64391021 - FLAM_A SINE Alu -1 132 1 26 0 0 0 chr20 2276987 2277013 -64390992 + AT_rich Low_complexity Low_complexity 1 26 0 566 264 87 42 chr20 2277106 2277371 -64390634 - L1MC4a LINE L1 -1911 5897 5621 1977 103 11 29 chr20 2277594 2277875 -64390130 + AluY SINE Alu 23 298 -13 532 202 118 22 chr20 2278187 2278365 -64389640 - MIR3 SINE MIR -2 206 12 2129 112 10 10 chr20 2278373 2278667 -64389338 + AluSx SINE Alu 1 294 -18 335 333 18 0 chr20 2279346 2279460 -64388545 - MIR3 SINE MIR -7 201 86 369 274 9 0 chr20 2280678 2280791 -64387214 + MIR SINE MIR 79 192 -70 1890 158 0 3 chr20 2280860 2281157 -64386848 + AluJb SINE Alu 1 296 -16 445 274 68 7 chr20 2282005 2282151 -64385854 - MER117 DNA MER1_type -37 160 6 194 208 0 21 chr20 2282811 2282859 -64385146 + MIR SINE MIR 87 133 -75 2481 76 0 0 chr20 2283051 2283353 -64384652 + AluY SINE Alu 1 302 -9 308 296 10 0 chr20 2283424 2283522 -64384483 - MER94 DNA DNA -35 99 1 247 293 154 8 chr20 2283530 2283653 -64384352 - MIR SINE MIR -64 198 58 501 321 80 13 chr20 2283711 2283948 -64384057 - MIR SINE MIR -1 261 9 181 118 59 0 chr20 2284711 2284745 -64383260 - MIR SINE MIR -64 144 109 501 319 32 0 chr20 2285030 2285187 -64382818 - L2 LINE L2 0 3272 3111 235 323 164 35 chr20 2285692 2285918 -64382087 + L3 LINE CR1 1294 1548 -29 183 230 79 119 chr20 2286277 2286403 -64381602 + MIR3 SINE MIR 84 204 -4 2173 224 111 9 chr20 2286913 2287453 -64380552 - MLT1G1 LTR MaLR 0 595 1 542 262 30 69 chr20 2287676 2287715 -64380290 + MIR SINE MIR 56 95 -167 798 164 0 15 chr20 2287715 2287849 -64380156 + FLAM_C SINE Alu 1 132 -1 542 262 30 69 chr20 2287849 2288011 -64379994 + MIR SINE MIR 95 249 -13 1805 246 30 39 chr20 2288149 2288747 -64379258 + MLT1F LTR MaLR 1 542 0 557 232 82 10 chr20 2288781 2288988 -64379017 - MER20B DNA MER1_type -38 745 524 * 1909 235 17 34 chr20 2288979 2289455 -64378550 + MER90 LTR ERV1 147 614 0 282 214 61 51 chr20 2289457 2289555 -64378450 - MER112 DNA MER1_type -106 154 56 293 239 110 9 chr20 2289628 2289737 -64378268 + MIR SINE MIR 13 132 -130 1335 258 79 22 chr20 2289743 2290375 -64377630 - L2 LINE L2 0 3313 2642 254 379 16 0 chr20 2290917 2291041 -64376964 + L2 LINE L2 2662 2787 -527 310 339 0 35 chr20 2291345 2291460 -64376545 + L2 LINE L2 3166 3276 -37 442 306 129 4 chr20 2291719 2291856 -64376149 - MIR SINE MIR -1 261 142 1684 165 39 4 chr20 2291856 2292135 -64375870 + AluJb SINE Alu 1 289 -23 442 306 129 4 chr20 2292135 2292229 -64375776 - MIR SINE MIR -119 143 1 2585 226 30 41 chr20 2292306 2292763 -64375242 - MER82 DNA MER2_type 0 653 203 1709 112 35 18 chr20 2292763 2293048 -64374957 - AluSx SINE Alu -18 294 5 2585 226 30 41 chr20 2293048 2293228 -64374777 - MER82 DNA MER2_type -450 203 23 1757 146 0 14 chr20 2293233 2293545 -64374460 + AluSx SINE Alu 1 308 0 508 254 164 0 chr20 2294886 2295051 -64372954 + MIR SINE MIR 14 205 -57 2303 91 3 0 chr20 2295124 2295431 -64372574 + AluSp SINE Alu 1 308 -5 944 165 74 0 chr20 2296108 2296284 -64371721 - MER5A DNA MER1_type 0 189 1 684 251 25 6 chr20 2296711 2296874 -64371131 - Charlie8 DNA MER1_type -2241 176 11 199 214 36 0 chr20 2296884 2296940 -64371065 - L2 LINE L2 -541 2773 2716 1045 219 41 156 chr20 2297364 2297993 -64370012 - MLT1G LTR MaLR 0 590 34 451 286 70 75 chr20 2298278 2298491 -64369514 + MIR SINE MIR 47 258 -4 285 276 81 8 chr20 2299155 2299278 -64368727 + MIR3 SINE MIR 51 182 -26 1673 128 3 106 chr20 2300117 2300446 -64367559 + AluSx SINE Alu 1 295 -7 944 260 22 5 chr20 2300775 2300998 -64367007 - MIR SINE MIR 0 262 36 461 222 21 56 chr20 2300998 2301142 -64366863 - L1MC/D LINE L1 -2012 5796 5658 1986 123 13 25 chr20 2301181 2301497 -64366508 + AluSx SINE Alu 1 312 0 231 336 44 9 chr20 2301868 2301981 -64366024 + MIR3 SINE MIR 38 154 -54 577 333 132 26 chr20 2302030 2302378 -64365627 + L2 LINE L2 2848 3232 -81 189 213 0 0 chr20 2302408 2302455 -64365550 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 229 274 43 60 chr20 2303281 2303398 -64364607 - MIR SINE MIR 0 262 148 2223 110 0 0 chr20 2303867 2304166 -64363839 - AluSq SINE Alu -14 299 1 892 234 173 19 chr20 2304216 2304587 -64363418 - MLT1H LTR MaLR -53 502 1 477 252 17 17 chr20 2304592 2304707 -64363298 + MER5B DNA MER1_type 64 178 0 1274 163 0 9 chr20 2305518 2305733 -64362272 + AluJb SINE Alu 85 297 -15 2196 88 16 0 chr20 2305779 2306087 -64361918 + AluSq SINE Alu 1 313 0 374 291 104 68 chr20 2306137 2306388 -64361617 - MIR SINE MIR -1 261 2 557 304 113 0 chr20 2306493 2306562 -64361443 - MIR SINE MIR -34 228 168 1916 137 17 0 chr20 2306562 2306855 -64361150 + AluSx SINE Alu 1 298 -14 557 304 113 0 chr20 2306855 2306989 -64361016 - MIR SINE MIR -94 168 2 222 255 121 64 chr20 2307188 2307329 -64360676 - L2 LINE L2 -175 3097 2949 596 281 78 45 chr20 2307520 2307825 -64360180 + L2 LINE L2 2907 3313 0 505 253 129 39 chr20 2307972 2308150 -64359855 - L2 LINE L2 -18 3295 3102 2317 225 47 19 chr20 2308191 2308655 -64359350 + L1MB8 LINE L1 2625 3117 -3029 2082 120 7 10 chr20 2308655 2308964 -64359041 + AluSx SINE Alu 1 308 -4 2317 225 47 19 chr20 2308964 2309197 -64358808 + L1MB8 LINE L1 3117 3342 -2804 2862 217 68 42 chr20 2309219 2309909 -64358096 + MER21B LTR ERV1 20 732 -131 192 77 0 0 chr20 2309909 2309935 -64358070 + (AATTG)n Simple_repeat Simple_repeat 1 26 0 2862 217 68 42 chr20 2309935 2309999 -64358006 + MER21B LTR ERV1 732 793 -70 3054 210 14 64 chr20 2310029 2310900 -64357105 + L1MB8 LINE L1 3340 4166 -1980 940 222 25 21 chr20 2310868 2311107 -64356898 + L1MB3 LINE L1 4870 5109 -1037 * 926 117 0 0 chr20 2311102 2311239 -64356766 + L1MB3 LINE L1 5592 5728 -455 * 234 143 0 0 chr20 2311241 2311276 -64356729 + 5S rRNA rRNA 2 36 -85 2766 126 20 11 chr20 2311277 2311736 -64356269 + L1MB3 LINE L1 5714 6176 -7 4350 187 22 75 chr20 2311822 2312354 -64355651 + L1MB8 LINE L1 4206 4645 -1501 1374 191 33 26 chr20 2312354 2312658 -64355347 + AluJb SINE Alu 1 306 -6 4350 187 22 75 chr20 2312658 2313290 -64354715 + L1MB8 LINE L1 4645 5309 -837 673 170 0 0 chr20 2313342 2313454 -64354551 + FLAM_C SINE Alu 28 139 -4 4489 150 41 18 chr20 2313455 2314306 -64353699 + L1MB8 LINE L1 5308 6178 0 239 175 0 0 chr20 2314306 2314346 -64353659 - L2 LINE L2 -250 3063 3024 200 212 0 0 chr20 2314699 2314732 -64353273 - MIR SINE MIR -113 149 117 428 317 170 7 chr20 2314800 2315100 -64352905 - L2 LINE L2 -718 2596 2248 353 293 83 32 chr20 2315120 2315277 -64352728 - MER102b DNA MER1_type 0 341 177 * 1037 162 24 0 chr20 2315270 2315437 -64352568 - MER66A LTR ERV1 -30 448 278 251 173 0 19 chr20 2315427 2315479 -64352526 + Alu SINE Alu 252 302 0 * 921 223 5 27 chr20 2315483 2315703 -64352302 + L1M4 LINE L1 4741 4955 -1191 1454 187 74 0 chr20 2315714 2315971 -64352034 - MER66A LTR ERV1 -202 276 1 613 232 127 72 chr20 2315993 2316230 -64351775 + MIR SINE MIR 13 262 0 358 250 148 39 chr20 2316258 2316386 -64351619 - MER102b DNA MER1_type -190 151 10 242 192 0 0 chr20 2316944 2316990 -64351015 - MIR SINE MIR -66 142 105 366 225 79 0 chr20 2317105 2317194 -64350811 + MER46C DNA MER2_type 220 315 -23 1836 124 40 13 chr20 2317226 2317524 -64350481 - AluSg SINE Alu -4 306 1 591 325 48 9 chr20 2317528 2317756 -64350249 - MIR SINE MIR -11 251 15 1686 81 0 9 chr20 2318020 2318241 -64349764 + AluSc SINE Alu 1 219 -90 253 222 8 8 chr20 2318359 2318485 -64349520 + CT-rich Low_complexity Low_complexity 1 126 0 573 247 230 37 chr20 2318717 2319065 -64348940 - L1ME4a LINE L1 -1 6120 5706 2275 69 0 7 chr20 2319188 2319492 -64348513 + AluY SINE Alu 1 302 -9 9095 187 30 46 chr20 2319534 2320205 -64347800 - L1MC2 LINE L1 -2 6342 5661 2259 105 0 0 chr20 2320205 2320510 -64347495 - AluSc SINE Alu -4 305 1 9095 187 30 46 chr20 2320510 2321075 -64346930 - L1MC2 LINE L1 -683 5661 5088 2180 100 0 0 chr20 2321075 2321364 -64346641 + AluSx SINE Alu 1 289 -23 9095 187 30 46 chr20 2321364 2321652 -64346353 - L1MC2 LINE L1 -1256 5088 4797 14543 115 37 54 chr20 2321652 2321874 -64346131 - Tigger1 DNA MER2_type -1 2417 2193 1729 138 6 66 chr20 2321874 2322192 -64345813 + AluJb SINE Alu 1 299 -13 14543 115 37 54 chr20 2322192 2324277 -64343728 - Tigger1 DNA MER2_type -225 2193 153 1602 159 3 51 chr20 2324277 2324591 -64343414 + AluJo SINE Alu 1 299 -13 14543 115 37 54 chr20 2324591 2324742 -64343263 - Tigger1 DNA MER2_type -2265 153 1 9095 187 30 46 chr20 2324742 2324947 -64343058 - L1MC2 LINE L1 -1547 4797 4590 1345 161 48 20 chr20 2324947 2325239 -64342766 - L1MA4 LINE L1 -6 6294 5995 9095 187 30 46 chr20 2325239 2326961 -64341044 - L1MC2 LINE L1 -1754 4590 2954 988 161 0 0 chr20 2326972 2327133 -64340872 - AluJb SINE Alu -3 309 149 1327 245 3 3 chr20 2327133 2327468 -64340537 - L1MC2 LINE L1 -3174 2972 2638 564 125 0 0 chr20 2327688 2327768 -64340237 - MER5A DNA MER1_type -105 84 5 225 365 0 0 chr20 2327782 2327867 -64340138 + MIR SINE MIR 176 260 -2 22 70 0 0 chr20 2327876 2327919 -64340086 + AT_rich Low_complexity Low_complexity 1 43 0 370 271 74 0 chr20 2327921 2328043 -64339962 + MIR SINE MIR 131 261 -1 2014 94 11 14 chr20 2328044 2328350 -64339655 - AluSx SINE Alu 0 305 1 2228 93 0 0 chr20 2328716 2329007 -64338998 + AluSc SINE Alu 3 293 -16 216 103 0 0 chr20 2329277 2329306 -64338699 + L2 LINE L2 3267 3295 -18 287 286 57 9 chr20 2329464 2329569 -64338436 + MIR SINE MIR 74 183 -79 580 159 12 29 chr20 2330392 2330562 -64337443 + (TTCA)n Simple_repeat Simple_repeat 2 168 0 385 229 7 13 chr20 2330578 2330731 -64337274 + (TTCA)n Simple_repeat Simple_repeat 1 152 0 239 331 63 14 chr20 2330896 2331038 -64336967 - L2 LINE L2 -173 3099 2951 245 325 244 5 chr20 2331050 2331247 -64336758 - L2 LINE L2 -198 3074 2831 2082 121 3 6 chr20 2331260 2331573 -64336432 - AluSx SINE Alu 0 312 1 516 258 30 0 chr20 2331941 2332073 -64335932 + MIR3 SINE MIR 34 169 -39 5388 129 19 45 chr20 2332602 2332933 -64335072 + HSMAR2 DNA Mariner 421 759 -543 2112 103 17 0 chr20 2332933 2333225 -64334780 + AluSx SINE Alu 1 297 -15 5388 129 19 45 chr20 2333225 2333539 -64334466 + HSMAR2 DNA Mariner 759 1038 -264 2226 103 0 0 chr20 2333539 2333840 -64334165 - AluSx SINE Alu -11 301 1 5388 129 19 45 chr20 2333840 2334099 -64333906 + HSMAR2 DNA Mariner 1038 1302 0 1251 206 5 0 chr20 2334676 2334895 -64333110 - MER58A DNA MER1_type 0 224 5 1307 279 58 7 chr20 2335870 2336297 -64331708 - LTR16A LTR ERVL 0 450 2 1838 141 0 11 chr20 2336565 2336746 -64331259 - AluSx SINE Alu 0 314 136 225 0 0 0 chr20 2336746 2336771 -64331234 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1838 141 0 11 chr20 2336771 2336906 -64331099 - AluSx SINE Alu -178 136 1 331 307 7 88 chr20 2336915 2336993 -64331012 - L2 LINE L2 -241 3072 3008 679 261 58 43 chr20 2336993 2337250 -64330755 - MIR SINE MIR 0 262 2 331 307 7 88 chr20 2337250 2337308 -64330697 - L2 LINE L2 -305 3008 2947 1621 250 108 43 chr20 2337629 2337697 -64330308 - MLT1G1 LTR MaLR 0 595 533 2235 98 3 0 chr20 2337697 2338003 -64330002 + AluSp SINE Alu 1 307 -6 1621 250 108 43 chr20 2338003 2338491 -64329514 - MLT1G1 LTR MaLR -62 533 3 186 344 16 0 chr20 2338674 2338738 -64329267 - L2 LINE L2 -379 2935 2871 1891 212 32 63 chr20 2339014 2339551 -64328454 - MLT2B1 LTR ERVL 0 520 1 186 152 30 0 chr20 2339681 2339714 -64328291 - L2 LINE L2 -11 3302 3269 * 633 252 19 7 chr20 2339711 2339866 -64328139 - MIR SINE MIR -92 170 14 2030 132 0 6 chr20 2340524 2340835 -64327170 - AluSx SINE Alu -3 309 1 1829 262 119 11 chr20 2340882 2341679 -64326326 + L1M4 LINE L1 4070 4952 -1194 2040 110 17 0 chr20 2341684 2341983 -64326022 + AluSx SINE Alu 1 304 -8 1049 208 4 79 chr20 2342002 2342281 -64325724 + LTR47A LTR ERVL 1 258 -194 262 189 0 34 chr20 2342283 2342342 -64325663 + LTR47B LTR ERVL 200 258 -185 262 189 0 34 chr20 2342344 2342403 -64325602 + LTR47B LTR ERVL 200 258 -185 262 189 0 34 chr20 2342405 2342464 -64325541 + LTR47B LTR ERVL 200 258 -185 259 271 0 0 chr20 2342466 2342525 -64325480 + LTR47A LTR ERVL 200 258 -194 262 189 0 34 chr20 2342527 2342586 -64325419 + LTR47B LTR ERVL 200 258 -185 247 189 0 34 chr20 2342588 2342647 -64325358 + LTR47B LTR ERVL 200 258 -185 262 189 0 34 chr20 2342649 2342708 -64325297 + LTR47B LTR ERVL 200 258 -185 247 189 0 34 chr20 2342710 2342769 -64325236 + LTR47B LTR ERVL 200 258 -185 232 171 0 0 chr20 2342795 2342830 -64325175 + LTR47A LTR ERVL 224 258 -194 262 189 0 34 chr20 2342832 2342891 -64325114 + LTR47B LTR ERVL 200 258 -185 247 189 0 34 chr20 2342893 2342952 -64325053 + LTR47B LTR ERVL 200 258 -185 262 189 0 34 chr20 2342954 2343013 -64324992 + LTR47B LTR ERVL 200 258 -185 262 189 0 34 chr20 2343015 2343074 -64324931 + LTR47B LTR ERVL 200 258 -185 1301 203 0 8 chr20 2343084 2343320 -64324685 + LTR47B LTR ERVL 210 443 0 247 179 0 0 chr20 2343321 2343360 -64324645 + LTR47B LTR ERVL 405 443 0 586 273 42 24 chr20 2343360 2343693 -64324312 + L1M4 LINE L1 4962 5300 -846 2263 142 78 0 chr20 2343717 2344091 -64323914 - MER101 LTR ERV1 0 474 72 873 107 0 137 chr20 2344091 2344318 -64323687 - AluSg/x SINE Alu 0 341 138 5173 201 58 61 chr20 2344362 2344559 -64323446 + L1MD1 LINE L1 5 201 -6341 1831 172 7 0 chr20 2344559 2344867 -64323138 - AluJb SINE Alu -2 310 1 5173 201 58 61 chr20 2344867 2346104 -64321901 + L1MD1 LINE L1 201 1434 -5108 1066 176 80 73 chr20 2346156 2346503 -64321502 + MER66A LTR ERV1 97 339 -139 2303 79 7 0 chr20 2346526 2346816 -64321189 + AluSp SINE Alu 1 292 -21 1823 214 83 41 chr20 2346820 2346907 -64321098 + L1MD1 LINE L1 3577 3659 -2985 2005 152 0 13 chr20 2346907 2347223 -64320782 + AluSx SINE Alu 1 312 0 1823 214 83 41 chr20 2347223 2347776 -64320229 + L1MD1 LINE L1 3659 4244 -2400 399 129 212 0 chr20 2347776 2347861 -64320144 + MER21-int LTR ERV1 3858 3960 -231 4781 154 25 48 chr20 2347861 2347890 -64320115 + L1MD1 LINE L1 5789 5817 -923 1570 115 196 8 chr20 2347890 2348150 -64319855 + AluSg1 SINE Alu 1 309 0 4781 154 25 48 chr20 2348150 2349095 -64318910 + L1MD1 LINE L1 5817 6740 0 873 150 0 0 chr20 2349102 2349229 -64318776 + FLAM_C SINE Alu 1 127 -6 386 191 43 11 chr20 2349271 2349365 -64318640 - L1M4 LINE L1 -3386 3571 3475 1054 219 36 33 chr20 2349396 2349510 -64318495 - L1M4 LINE L1 -5341 1518 1406 270 81 0 0 chr20 2349510 2349547 -64318458 + (TG)n Simple_repeat Simple_repeat 1 37 0 212 0 36 0 chr20 2349546 2349574 -64318431 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 1054 219 36 33 chr20 2349547 2349765 -64318240 - L1M4 LINE L1 -5453 1406 1212 1029 285 88 25 chr20 2349960 2350472 -64317533 + L2 LINE L2 2335 2878 -436 1657 230 120 56 chr20 2350478 2350585 -64317420 - LTR41 LTR ERVL 0 795 696 2283 189 17 13 chr20 2350585 2351044 -64316961 - MER65C LTR ERV1 0 461 1 1657 230 120 56 chr20 2351044 2351664 -64316341 - LTR41 LTR ERVL -99 696 3 891 272 59 49 chr20 2351667 2352093 -64315912 + L2 LINE L2 2884 3313 0 207 171 0 0 chr20 2352214 2352237 -64315768 + T-rich Low_complexity Low_complexity 1 26 -15 626 132 47 0 chr20 2352237 2352343 -64315662 - HY1 scRNA scRNA -1 111 1 207 171 0 0 chr20 2352343 2352360 -64315645 + T-rich Low_complexity Low_complexity 25 41 0 2119 221 77 22 chr20 2352362 2352909 -64315096 - L1ME3A LINE L1 0 6170 5594 539 120 102 0 chr20 2353015 2353123 -64314882 + LTR52 LTR ERVL 236 354 -67 227 209 0 0 chr20 2353196 2353239 -64314766 - MIR SINE MIR -115 147 105 279 0 0 0 chr20 2353243 2353274 -64314731 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 193 105 0 53 chr20 2353296 2353334 -64314671 - L2 LINE L2 -71 3242 3207 297 303 113 30 chr20 2353349 2353580 -64314425 + L1MC/D LINE L1 5344 5593 -2215 2064 108 27 17 chr20 2353591 2353887 -64314118 - AluSx SINE Alu -13 299 1 189 0 0 0 chr20 2354268 2354289 -64313716 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2008 46 4 4 chr20 2354302 2354542 -64313463 - AluSp SINE Alu -73 240 1 249 116 5 68 chr20 2354990 2355049 -64312956 + Alu SINE Alu 253 302 0 361 156 55 18 chr20 2355056 2355165 -64312840 + GA-rich Low_complexity Low_complexity 2 114 0 1124 117 0 19 chr20 2355206 2355368 -64312637 + AluJo SINE Alu 133 291 -21 2096 93 18 7 chr20 2355964 2356244 -64311761 - AluSx SINE Alu -19 293 11 2003 125 66 0 chr20 2356742 2357031 -64310974 + AluSx SINE Alu 1 308 -4 1738 197 92 28 chr20 2357311 2357669 -64310336 - L1MB5 LINE L1 0 6174 5778 1841 148 99 69 chr20 2357669 2358101 -64309904 + MER65A LTR ERV1 1 445 0 1738 197 92 28 chr20 2358101 2358210 -64309795 - L1MB5 LINE L1 -396 5778 5677 351 176 118 0 chr20 2358215 2358283 -64309722 + LTR8 LTR ERV1 3 78 -613 545 211 0 0 chr20 2358288 2358383 -64309622 - LTR8A LTR ERV1 -464 263 169 759 236 89 13 chr20 2358421 2358646 -64309359 - MER21B LTR ERV1 -621 242 1 3329 208 111 50 chr20 2358651 2360351 -64307654 - L1MB5 LINE L1 -533 5647 3841 240 330 38 0 chr20 2363441 2363547 -64304458 + MIR SINE MIR 42 151 -57 1298 91 0 17 chr20 2363946 2364121 -64303884 + AluSc SINE Alu 132 303 -6 347 245 102 10 chr20 2364214 2364312 -64303693 + MIR SINE MIR 41 147 -115 842 111 0 15 chr20 2364640 2364775 -64303230 - FLAM_C SINE Alu 0 133 1 2151 130 0 0 chr20 2367869 2368169 -64299836 + AluSx SINE Alu 1 300 -12 673 226 164 0 chr20 2368300 2368508 -64299497 - MIR SINE MIR -6 256 15 268 265 128 0 chr20 2368518 2368635 -64299370 + L2 LINE L2 2618 2749 -565 2294 100 0 3 chr20 2368635 2368936 -64299069 + AluSq SINE Alu 1 300 -13 993 244 111 31 chr20 2370246 2370697 -64297308 + L2 LINE L2 2817 3303 -10 * 1178 264 131 64 chr20 2370678 2370720 -64297285 + L2 LINE L2 2159 2197 -1117 2220 93 0 66 chr20 2370720 2371053 -64296952 - AluSx SINE Alu -1 311 1 1178 264 131 64 chr20 2371053 2371744 -64296261 + L2 LINE L2 2197 2941 -373 190 286 143 71 chr20 2371745 2371885 -64296120 - MIR SINE MIR -78 184 35 538 195 120 25 chr20 2371993 2372193 -64295812 - L2 LINE L2 -87 3226 3008 3812 182 68 11 chr20 2372235 2372397 -64295608 - L1MB7 LINE L1 -244 5940 5789 1848 125 83 3 chr20 2372397 2372709 -64295296 + MER44D DNA MER2_type 1 607 -2 3812 182 68 11 chr20 2372709 2373274 -64294731 - L1MB7 LINE L1 -395 5789 5258 1814 130 53 33 chr20 2373274 2373573 -64294432 - AluJb SINE Alu -7 305 1 3812 182 68 11 chr20 2373573 2374074 -64293931 - L1MB7 LINE L1 -926 5258 4625 898 206 104 28 chr20 2374226 2374564 -64293441 - MER58B DNA MER1_type -13 328 1 1975 99 18 4 chr20 2374807 2375079 -64292926 + AluSq SINE Alu 2 277 -36 225 269 103 26 chr20 2375176 2375254 -64292751 - LTR41 LTR ERVL -180 593 510 680 110 0 0 chr20 2375941 2376041 -64291964 + AluSp/q SINE Alu 214 313 0 837 170 79 0 chr20 2376076 2376241 -64291764 - LTR41 LTR ERVL -595 178 1 783 185 7 22 chr20 2376872 2377007 -64290998 + FLAM_C SINE Alu 1 133 0 2123 108 0 0 chr20 2377794 2378063 -64289942 - AluSx SINE Alu -17 295 27 792 134 0 52 chr20 2378428 2378562 -64289443 - FLAM_C SINE Alu -5 128 2 1855 210 28 13 chr20 2379538 2379928 -64288077 + MSTD LTR MaLR 1 396 0 186 254 0 0 chr20 2380621 2380688 -64287317 + GA-rich Low_complexity Low_complexity 2 68 0 387 217 198 76 chr20 2381589 2381908 -64286097 - LTR16A LTR ERVL -93 364 8 209 330 11 11 chr20 2384399 2384487 -64283518 - L2 LINE L2 -12 3260 3173 2855 248 120 37 chr20 2385653 2385719 -64282286 - L1MC4a LINE L1 -743 5403 5344 2156 108 35 0 chr20 2385719 2386007 -64281998 + AluSp SINE Alu 1 298 -15 2855 248 120 37 chr20 2386007 2386108 -64281897 - L1MC4a LINE L1 -802 5344 5253 1021 201 106 0 chr20 2386108 2386307 -64281698 - MER58A DNA MER1_type -1 223 4 2855 248 120 37 chr20 2386307 2387726 -64280279 - L1MC4a LINE L1 -893 5253 4762 25 40 0 20 chr20 2387961 2387988 -64280017 + AT_rich Low_complexity Low_complexity 1 28 -21 1882 146 3 7 chr20 2387988 2388275 -64279730 + AluJb SINE Alu 1 286 -26 25 40 0 20 chr20 2388275 2388297 -64279708 + AT_rich Low_complexity Low_complexity 28 49 0 334 321 136 18 chr20 2388301 2388522 -64279483 + L1MC5 LINE L1 7610 7856 -105 720 313 84 10 chr20 2388654 2388964 -64279041 + MLT1I LTR MaLR 63 395 -14 298 304 0 54 chr20 2389073 2389097 -64278908 + GA-rich Low_complexity Low_complexity 3 27 -81 795 160 15 0 chr20 2389097 2389228 -64278777 + FLAM_C SINE Alu 1 133 0 298 304 0 54 chr20 2389228 2389315 -64278690 + GA-rich Low_complexity Low_complexity 27 108 0 222 62 0 0 chr20 2389707 2389739 -64278266 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1323 108 0 0 chr20 2389753 2389929 -64278076 - AluSq SINE Alu -3 310 135 243 295 0 0 chr20 2390181 2390259 -64277746 + (CAAAT)n Simple_repeat Simple_repeat 5 82 0 1533 172 41 7 chr20 2390365 2390694 -64277311 + MER33 DNA MER1_type 1 324 0 1500 200 62 0 chr20 2390704 2391024 -64276981 + MER58B DNA MER1_type 2 341 0 1778 120 0 0 chr20 2391074 2391315 -64276690 - AluSc SINE Alu -6 303 63 896 296 25 68 chr20 2391417 2391900 -64276105 + L2 LINE L2 2851 3312 -1 1918 159 0 3 chr20 2393716 2394012 -64273993 + AluJb SINE Alu 5 292 -20 341 274 42 0 chr20 2394591 2394686 -64273319 + MLT1I LTR MaLR 63 161 -248 2228 106 0 3 chr20 2394894 2395205 -64272800 - AluSg SINE Alu 0 310 1 2981 282 96 38 chr20 2395212 2396024 -64271981 - L2 LINE L2 -46 3267 2504 2265 79 3 0 chr20 2396024 2396316 -64271689 + AluSp SINE Alu 1 293 -20 2981 282 96 38 chr20 2396316 2396961 -64271044 - L2 LINE L2 -809 2504 1725 238 278 148 46 chr20 2397169 2397277 -64270728 - L2 LINE L2 -13 3259 3141 2072 108 3 0 chr20 2397300 2397596 -64270409 + AluSp SINE Alu 1 297 -16 827 244 17 60 chr20 2397868 2398102 -64269903 - MIR SINE MIR -11 251 28 1388 170 61 0 chr20 2398103 2398350 -64269655 - AluJb SINE Alu -50 262 1 2758 13 0 0 chr20 2398411 2398720 -64269285 + AluYa5 SINE Alu 3 311 0 617 201 27 85 chr20 2399174 2399398 -64268607 + L1MC5 LINE L1 7639 7849 -112 228 284 110 32 chr20 2399437 2399592 -64268413 + MIR SINE MIR 95 261 -1 43935 44 5 2 chr20 2400051 2406184 -64261821 + L1PA4 LINE L1 3 6155 0 2359 63 3 3 chr20 2406207 2406510 -64261495 + AluSp SINE Alu 1 303 -10 214 370 0 0 chr20 2406688 2406761 -64261244 - MIR SINE MIR 0 262 190 384 191 61 69 chr20 2406938 2407069 -64260936 + L1MC5 LINE L1 7800 7929 -32 372 102 0 102 chr20 2408810 2408898 -64259107 + FRAM/FAM SINE Alu 1 78 -88 25 31 0 0 chr20 2408903 2408935 -64259070 + AT_rich Low_complexity Low_complexity 1 32 0 2188 225 86 22 chr20 2409020 2409686 -64258319 + MER67C LTR ERV1 3 710 0 3041 112 38 42 chr20 2409902 2410328 -64257677 - LOR1a LTR ERV1 0 497 72 1858 153 13 3 chr20 2410328 2410635 -64257370 - AluJb SINE Alu -2 310 1 3041 112 38 42 chr20 2410635 2410707 -64257298 - LOR1a LTR ERV1 -425 72 1 391 171 13 0 chr20 2410831 2410907 -64257098 + L1MC1 LINE L1 6257 6333 0 5305 192 66 21 chr20 2411008 2412029 -64255976 + L1MB5 LINE L1 4004 4978 -1196 1673 134 13 59 chr20 2412029 2412335 -64255670 + AluJo SINE Alu 1 292 -20 5305 192 66 21 chr20 2412335 2413270 -64254735 + L1MB5 LINE L1 4978 6065 -109 465 122 58 6 chr20 2413359 2413467 -64254538 + L1MB4 LINE L1 6046 6158 -16 23 33 0 0 chr20 2413852 2413882 -64254123 + AT_rich Low_complexity Low_complexity 1 30 0 1766 145 0 63 chr20 2413925 2414319 -64253686 + AluSx SINE Alu 1 373 0 319 351 6 6 chr20 2415180 2415354 -64252651 + (TTAGGG)n Simple_repeat Simple_repeat 1 174 0 598 184 68 0 chr20 2415453 2415556 -64252449 + FLAM_A SINE Alu 12 121 -21 271 305 23 15 chr20 2415572 2415703 -64252302 + (TTAGGG)n Simple_repeat Simple_repeat 1 132 0 323 322 20 0 chr20 2415980 2416129 -64251876 + (TTAGGG)n Simple_repeat Simple_repeat 3 154 0 342 250 17 108 chr20 2416493 2416613 -64251392 + L1MC4 LINE L1 6595 6703 -1339 189 171 0 0 chr20 2416620 2416655 -64251350 + (TA)n Simple_repeat Simple_repeat 2 36 0 246 167 50 33 chr20 2416655 2416715 -64251290 - MLT2D LTR ERVL -137 277 217 1797 144 0 38 chr20 2416719 2417032 -64250973 - AluJo SINE Alu -11 301 1 22 0 0 0 chr20 2417077 2417099 -64250906 + AT_rich Low_complexity Low_complexity 1 22 0 1948 146 0 9 chr20 2417227 2417542 -64250463 - AluSx SINE Alu 0 312 1 1843 126 74 44 chr20 2418002 2418366 -64249639 + THE1C LTR MaLR 1 375 0 231 345 0 0 chr20 2418511 2418624 -64249381 + (CCCTAA)n Simple_repeat Simple_repeat 6 118 0 652 153 144 144 chr20 2418665 2418887 -64249118 + MLT2D LTR ERVL 193 414 0 828 148 0 16 chr20 2419577 2419705 -64248300 + FLAM_C SINE Alu 2 127 -6 21 0 0 0 chr20 2419705 2419726 -64248279 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr20 2419824 2419847 -64248158 + (TTTTA)n Simple_repeat Simple_repeat 1 23 0 1408 147 0 9 chr20 2421892 2422116 -64245889 + AluJb SINE Alu 1 222 -90 3802 121 28 2 chr20 2422116 2422679 -64245326 + MER41B LTR ERV1 1 578 -57 1095 135 0 0 chr20 2422903 2423073 -64244932 - AluSg/x SINE Alu -9 301 132 459 92 15 0 chr20 2423080 2423145 -64244860 + MER41A LTR ERV1 489 554 0 611 51 51 0 chr20 2423145 2423224 -64244781 + AluSg/x SINE Alu 216 298 -11 1518 148 38 4 chr20 2423274 2423537 -64244468 + AluJb SINE Alu 12 283 -29 523 93 289 0 chr20 2424019 2424116 -64243889 - FLAM_C SINE Alu -5 128 4 3558 122 22 76 chr20 2424814 2425340 -64242665 - MER41B LTR ERV1 0 635 151 2186 88 27 0 chr20 2425340 2425636 -64242369 - AluSx SINE Alu 0 312 9 3558 122 22 76 chr20 2425636 2425780 -64242225 - MER41B LTR ERV1 -484 151 1 490 149 0 0 chr20 2425873 2425960 -64242045 + L1MB7 LINE L1 6091 6177 -7 654 309 74 8 chr20 2426047 2426303 -64241702 + HAL1 LINE L1 482 754 -1753 795 259 0 11 chr20 2426355 2426540 -64241465 + MER20 DNA MER1_type 37 219 0 369 295 0 9 chr20 2426541 2426653 -64241352 + HAL1 LINE L1 748 858 -1649 317 306 18 18 chr20 2427485 2427596 -64240409 - MIR SINE MIR -64 198 88 273 379 86 8 chr20 2429130 2429492 -64238513 - L2 LINE L2 -346 2968 2579 427 275 150 15 chr20 2429507 2429707 -64238298 + MIR SINE MIR 2 228 -34 424 212 0 117 chr20 2429748 2429854 -64238151 + MER45B DNA AcHobo 2 90 -1491 2161 86 20 0 chr20 2429854 2430146 -64237859 - AluSx SINE Alu -14 298 1 424 212 0 117 chr20 2430146 2430176 -64237829 + MER45B DNA AcHobo 90 122 -1459 1101 227 4 34 chr20 2430178 2430313 -64237692 + AluJb SINE Alu 1 138 -174 2128 118 0 13 chr20 2430313 2430627 -64237378 + AluSx SINE Alu 1 310 -2 2098 134 3 0 chr20 2430631 2430936 -64237069 + AluSx SINE Alu 1 306 -6 1101 227 4 34 chr20 2430936 2431064 -64236941 + AluJb SINE Alu 141 261 -51 327 66 16 33 chr20 2431070 2431131 -64236874 + (GGAGAA)n Simple_repeat Simple_repeat 3 62 0 3710 209 32 2 chr20 2431135 2431966 -64236039 + MER45B DNA AcHobo 142 1040 0 768 270 140 32 chr20 2432310 2432718 -64235287 - LTR16A1 LTR ERVL -4 453 2 282 353 67 0 chr20 2432893 2433012 -64234993 + MIR SINE MIR 120 246 -16 261 277 60 0 chr20 2433327 2433410 -64234595 + L2 LINE L2 3201 3288 -25 771 103 0 0 chr20 2433556 2433673 -64234332 + AluY SINE Alu 191 307 -4 1219 213 100 68 chr20 2434163 2434225 -64233780 - Charlie4a DNA MER1_type -1454 507 448 1982 124 24 0 chr20 2434225 2434523 -64233482 - AluSx SINE Alu -7 305 1 1219 213 100 68 chr20 2434523 2434949 -64233056 - Charlie4a DNA MER1_type -1513 448 3 812 170 0 0 chr20 2435214 2435349 -64232656 - FLAM_C SINE Alu 0 143 9 324 297 102 0 chr20 2435982 2436110 -64231895 + MIR SINE MIR 48 188 -74 209 312 64 16 chr20 2436719 2436844 -64231161 - L2 LINE L2 -186 3086 2956 2202 101 3 3 chr20 2439206 2439514 -64228491 - AluSg SINE Alu -2 308 1 2020 122 14 0 chr20 2439604 2439899 -64228106 + AluSx SINE Alu 1 299 -13 340 281 143 70 chr20 2440402 2440584 -64227421 - L1ME LINE L1 -298 5823 5656 2095 127 0 6 chr20 2440584 2440898 -64227107 + AluSx SINE Alu 1 312 0 340 281 143 70 chr20 2440898 2441171 -64226834 - L1ME LINE L1 -465 5656 5335 633 211 121 115 chr20 2441283 2441822 -64226183 - MER34 LTR ERV1 0 542 1 1307 73 23 0 chr20 2441924 2442101 -64225904 - AluSg/x SINE Alu -15 297 117 2187 120 0 0 chr20 2442180 2442488 -64225517 + AluSx SINE Alu 1 308 -4 980 223 168 59 chr20 2442542 2442964 -64225041 - MER110A LTR ERV1 0 468 1 2530 207 25 30 chr20 2443093 2443129 -64224876 - MER110A-int LTR ERV1 -31 4616 4581 2163 87 3 45 chr20 2443129 2443441 -64224564 - AluSx SINE Alu -13 299 1 2530 207 25 30 chr20 2443441 2443973 -64224032 - MER110A-int LTR ERV1 -66 4581 4051 1519 160 113 7 chr20 2444003 2444278 -64223727 + AluJo SINE Alu 1 304 -8 850 237 0 0 chr20 2444281 2444437 -64223568 + AluJo/FRAM SINE Alu 132 287 -25 207 114 0 0 chr20 2444444 2444479 -64223526 + (CATA)n Simple_repeat Simple_repeat 2 36 0 1555 209 84 28 chr20 2444499 2444892 -64223113 - MER110A-int LTR ERV1 -622 4025 3611 709 72 0 40 chr20 2444893 2445018 -64222987 + (GAA)n Simple_repeat Simple_repeat 3 122 0 822 102 36 18 chr20 2445020 2445187 -64222818 + GA-rich Low_complexity Low_complexity 3 172 0 1730 218 95 18 chr20 2445192 2445633 -64222372 - MER110A-int LTR ERV1 -1049 3598 3124 761 218 68 34 chr20 2445724 2445930 -64222075 - MER110A-int LTR ERV1 -1681 2966 2754 230 271 24 38 chr20 2446361 2446453 -64221552 - MER5A DNA MER1_type -87 102 1 550 256 108 74 chr20 2446592 2446982 -64221023 - MER31-int LTR ERV1 -1870 3066 2664 478 178 89 32 chr20 2447060 2447217 -64220788 - MER31-int LTR ERV1 -2563 2373 2208 2366 96 3 0 chr20 2447582 2447894 -64220111 + AluSp SINE Alu 1 313 0 403 232 66 13 chr20 2448128 2448279 -64219726 - MER31-int LTR ERV1 -3470 1466 1308 1337 195 75 10 chr20 2448289 2448581 -64219424 - AluJo SINE Alu -1 311 1 1946 113 0 0 chr20 2448686 2448942 -64219063 + AluSx SINE Alu 1 256 -56 378 129 71 0 chr20 2449052 2449122 -64218883 - L1MC2 LINE L1 0 6624 6550 2166 117 0 7 chr20 2449126 2449425 -64218580 + AluSx SINE Alu 1 297 -15 984 154 0 12 chr20 2449438 2449600 -64218405 + AluJb SINE Alu 147 306 -6 9623 201 86 43 chr20 2449602 2451202 -64216803 - L1MC2 LINE L1 -68 6556 5026 1579 182 27 24 chr20 2451202 2451499 -64216506 + AluJo SINE Alu 1 298 -14 9623 201 86 43 chr20 2451499 2451743 -64216262 - L1MC2 LINE L1 -1598 5026 4794 1911 154 17 0 chr20 2451743 2452041 -64215964 - AluSx SINE Alu -9 303 1 9623 201 86 43 chr20 2452041 2453106 -64214899 - L1MC2 LINE L1 -1830 4794 3776 2339 85 3 10 chr20 2453106 2453412 -64214593 - AluSq SINE Alu -9 304 1 9623 201 86 43 chr20 2453412 2453489 -64214516 - L1MC2 LINE L1 -2848 3776 3704 285 116 0 0 chr20 2453489 2453532 -64214473 + Alu SINE Alu 249 291 -11 9623 201 86 43 chr20 2453532 2454297 -64213708 - L1MC2 LINE L1 -2920 3704 2973 2278 113 0 0 chr20 2454297 2454606 -64213399 - AluSx SINE Alu -3 309 1 9623 201 86 43 chr20 2454606 2455304 -64212701 - L1MC2 LINE L1 -3651 2973 2306 2224 107 27 0 chr20 2455304 2455604 -64212401 - AluSg SINE Alu -2 308 1 9623 201 86 43 chr20 2455604 2455714 -64212291 - L1MC2 LINE L1 -4318 2306 2202 1424 177 135 0 chr20 2455714 2455980 -64212025 + AluJo SINE Alu 1 302 0 9623 201 86 43 chr20 2455980 2456746 -64211259 - L1MC2 LINE L1 -4422 2202 937 1697 120 0 4 chr20 2456750 2456991 -64211014 - AluSg/x SINE Alu -7 305 66 271 176 78 0 chr20 2456993 2457044 -64210961 - L1MC2 LINE L1 -6021 405 351 1371 193 96 12 chr20 2457102 2457424 -64210581 - MER39 LTR ERV1 -2 705 357 642 153 105 8 chr20 2457442 2457566 -64210439 - MER39 LTR ERV1 -567 140 5 241 247 52 0 chr20 2458459 2458536 -64209469 + MIR3 SINE MIR 113 193 -15 186 379 48 82 chr20 2459191 2459460 -64208545 - L2 LINE L2 -91 3181 2922 2493 70 0 0 chr20 2459781 2460079 -64207926 + AluY SINE Alu 1 298 -13 639 195 42 0 chr20 2460182 2460300 -64207705 + MER3 DNA MER1_type 32 154 -55 * 2234 213 31 9 chr20 2460296 2460846 -64207159 + MER3 DNA MER1_type 2063 2624 0 2226 104 0 0 chr20 2461902 2462199 -64205806 + AluSx SINE Alu 14 310 -2 692 209 14 98 chr20 2462605 2462763 -64205242 + MER3 DNA MER1_type 1 138 -71 1146 150 45 0 chr20 2462763 2462960 -64205045 + L1MA8 LINE L1 6062 6271 -20 1728 171 3 10 chr20 2462960 2463253 -64204752 - AluJo SINE Alu -21 291 1 1146 150 45 0 chr20 2463253 2463275 -64204730 + L1MA8 LINE L1 6271 6291 0 692 209 14 98 chr20 2463275 2463331 -64204674 + MER3 DNA MER1_type 138 197 -12 2475 67 0 0 chr20 2463376 2463675 -64204330 - AluY SINE Alu -12 299 1 782 237 137 19 chr20 2464411 2464622 -64203383 - MIR SINE MIR -4 258 23 816 122 0 16 chr20 2464623 2464746 -64203259 - FLAM_C SINE Alu 0 143 23 2080 139 7 0 chr20 2464984 2465285 -64202720 + AluSx SINE Alu 2 304 -8 390 223 93 118 chr20 2465288 2465543 -64202462 + MIR SINE MIR 10 262 0 5415 175 160 110 chr20 2465814 2466782 -64201223 + L1MDa LINE L1 18 1245 -5295 816 163 7 14 chr20 2466782 2466923 -64201082 - FLAM_C SINE Alu -2 141 2 5415 175 160 110 chr20 2466923 2467535 -64200470 + L1MDa LINE L1 1245 1825 -4715 508 233 94 59 chr20 2468305 2468507 -64199498 + MER63A DNA MER1_type 2 210 0 301 231 0 0 chr20 2468614 2468666 -64199339 + Tigger5 DNA MER2_type 4 55 -2268 * 303 197 42 14 chr20 2468635 2468706 -64199299 + Tigger5 DNA MER2_type 2251 2323 0 534 172 11 11 chr20 2468749 2468842 -64199163 + Tigger5 DNA MER2_type 2231 2323 0 * 1119 209 26 9 chr20 2468840 2469070 -64198935 - MLT1E3 LTR MaLR 0 624 391 6722 182 20 11 chr20 2469138 2469635 -64198370 + L1P4 LINE L1 3920 4411 -1755 189 0 0 0 chr20 2469635 2469656 -64198349 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 6722 182 20 11 chr20 2469656 2470749 -64197256 + L1P4 LINE L1 4411 5528 -638 212 0 36 0 chr20 2470749 2470777 -64197228 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 6722 182 20 11 chr20 2470777 2470844 -64197161 + L1P4 LINE L1 5528 5593 -573 422 190 0 80 chr20 2470844 2470944 -64197061 - MLT1E3 LTR MaLR -433 193 102 875 155 7 0 chr20 2470944 2471086 -64196919 + FLAM_C SINE Alu 1 143 0 318 210 0 0 chr20 2471087 2471149 -64196856 - MLT1E3 LTR MaLR -514 112 51 387 280 0 11 chr20 2471197 2471290 -64196715 - L2 LINE L2 -30 3283 3192 712 161 0 146 chr20 2472143 2472348 -64195657 - FAM SINE Alu -7 42 1 225 303 123 25 chr20 2472375 2472774 -64195231 - L1M4 LINE L1 -1455 4691 4254 2665 45 0 0 chr20 2472774 2473085 -64194920 - AluY SINE Alu 0 311 1 422 283 89 108 chr20 2473432 2473962 -64194043 - L1M4 LINE L1 -2324 3822 3304 2111 104 49 0 chr20 2473962 2474249 -64193756 - AluSx SINE Alu -9 303 3 422 283 89 108 chr20 2474249 2474347 -64193658 - L1M4 LINE L1 -2842 3304 3206 357 346 66 50 chr20 2474419 2474737 -64193268 - L1MC/D LINE L1 -2071 5737 5415 520 206 71 0 chr20 2474744 2474870 -64193135 - L1MB1 LINE L1 0 6168 6034 2296 104 3 0 chr20 2476126 2476433 -64191572 - AluSx SINE Alu -4 308 1 973 112 0 0 chr20 2476441 2476566 -64191439 - AluSq/x SINE Alu -187 125 1 1628 122 76 11 chr20 2476865 2477128 -64190877 + AluJb SINE Alu 11 290 -22 2175 109 3 0 chr20 2477264 2477549 -64190456 + AluSx SINE Alu 1 286 -26 2168 110 0 7 chr20 2478602 2478945 -64189060 - AluSx SINE Alu 0 345 5 316 348 56 17 chr20 2478948 2479126 -64188879 + MIR SINE MIR 39 223 -39 258 24 122 0 chr20 2479398 2479439 -64188566 - MADE1 DNA Mariner 0 80 35 329 113 81 0 chr20 2479483 2479545 -64188460 - MADE1 DNA Mariner -12 68 2 841 226 0 0 chr20 2479817 2479972 -64188033 - FRAM SINE Alu -21 155 1 29 0 0 0 chr20 2481684 2481713 -64186292 + AT_rich Low_complexity Low_complexity 1 29 0 1972 145 0 0 chr20 2481719 2482001 -64186004 - AluSx SINE Alu -30 282 1 559 262 36 42 chr20 2482236 2482359 -64185646 + MER5B DNA MER1_type 11 134 -44 1765 231 113 45 chr20 2482359 2482689 -64185316 + MLT1E LTR MaLR 1 386 -207 2249 112 3 0 chr20 2482689 2482985 -64185020 - AluSg SINE Alu -13 297 1 1765 231 113 45 chr20 2482985 2483209 -64184796 + MLT1E LTR MaLR 386 593 0 559 262 36 42 chr20 2483209 2483253 -64184752 + MER5B DNA MER1_type 134 177 -1 2784 13 0 0 chr20 2483388 2483691 -64184314 + AluYa5 SINE Alu 1 303 -8 272 264 38 31 chr20 2484020 2484042 -64183963 - L1MA10 LINE L1 0 6334 6313 1894 207 32 74 chr20 2484042 2484568 -64183437 - L1ME1 LINE L1 -11 6155 5652 1354 239 50 119 chr20 2484625 2485262 -64182743 - MLT1E LTR MaLR 0 593 1 681 251 40 87 chr20 2485267 2485613 -64182392 - MLT1E-int LTR MaLR -5 1366 1037 2744 140 34 5 chr20 2485613 2486027 -64181978 - MSTB LTR MaLR 0 426 1 347 263 100 50 chr20 2486044 2486364 -64181641 - L1ME LINE L1 -3137 3245 2910 855 231 61 4 chr20 2486518 2486795 -64181210 - L1M4 LINE L1 -2275 3871 3579 2076 101 3 20 chr20 2486832 2487138 -64180867 - L1MA8 LINE L1 -3 6288 5988 2287 180 90 14 chr20 2487184 2487748 -64180257 + MLT1E2 LTR MaLR 1 622 -4 339 250 38 50 chr20 2487757 2487900 -64180105 - L1ME LINE L1 -4862 1510 1251 285 51 0 0 chr20 2487909 2487948 -64180057 + (TG)n Simple_repeat Simple_repeat 2 40 0 393 267 52 33 chr20 2487977 2488302 -64179703 - L1ME LINE L1 -5025 1347 1011 486 0 0 0 chr20 2488496 2488550 -64179455 + (TG)n Simple_repeat Simple_repeat 1 54 0 562 139 0 0 chr20 2488550 2488629 -64179376 - AluJb SINE Alu -196 116 38 327 302 8 31 chr20 2488891 2488904 -64179101 + L1PA8A LINE L1 5693 5705 -426 2406 69 0 0 chr20 2488904 2489194 -64178811 - AluY SINE Alu -21 290 1 327 302 8 31 chr20 2489194 2489309 -64178696 + L1PA8A LINE L1 5705 5818 -313 * 868 248 24 16 chr20 2489195 2489441 -64178564 + L1ME3A LINE L1 5704 5951 -219 348 294 110 41 chr20 2489723 2490312 -64177693 + L1ME4a LINE L1 3969 4598 -1548 309 296 52 28 chr20 2490319 2490636 -64177369 + L1ME4a LINE L1 5659 6041 -80 1901 154 3 13 chr20 2490648 2491005 -64177000 + AluJb SINE Alu 1 354 0 282 186 0 17 chr20 2491008 2491067 -64176938 + L1ME4a LINE L1 6060 6117 -4 2216 116 7 0 chr20 2491097 2491391 -64176614 + AluSq SINE Alu 1 296 -17 180 302 142 41 chr20 2491943 2492211 -64175794 + L2 LINE L2 2252 2546 -768 1802 146 90 36 chr20 2492226 2492582 -64175423 - THE1C LTR MaLR 0 375 1 388 322 100 31 chr20 2492860 2493251 -64174754 + L2 LINE L2 2560 2977 -337 2163 139 0 0 chr20 2493451 2493753 -64174252 - AluSx SINE Alu -10 302 1 461 281 34 7 chr20 2494400 2494546 -64173459 - L2 LINE L2 -302 3011 2862 234 152 0 0 chr20 2495525 2495571 -64172434 - MADE1 DNA Mariner 0 80 35 2320 96 0 3 chr20 2495575 2495876 -64172129 + AluSx SINE Alu 1 300 -12 348 24 0 0 chr20 2495943 2495984 -64172021 + (TG)n Simple_repeat Simple_repeat 2 42 0 2031 135 0 32 chr20 2496711 2497023 -64170982 - AluSq SINE Alu -11 302 1 655 236 43 0 chr20 2497137 2497298 -64170707 - MER5B DNA MER1_type -6 172 5 719 73 0 0 chr20 2497333 2497429 -64170576 + L1PB1 LINE L1 6056 6151 0 2007 109 33 7 chr20 2497620 2497933 -64170072 - AluSx SINE Alu 0 320 1 201 39 0 0 chr20 2498081 2498107 -64169898 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 559 86 0 0 chr20 2498294 2498364 -64169641 - AluSq/x SINE Alu -185 128 59 849 158 0 8 chr20 2498364 2498497 -64169508 + AluSg/x SINE Alu 155 286 -26 180 0 0 0 chr20 2498521 2498541 -64169464 + (A)n Simple_repeat Simple_repeat 1 20 0 272 62 167 0 chr20 2498769 2498817 -64169188 - AluJo SINE Alu 0 302 247 955 140 0 20 chr20 2498817 2498967 -64169038 - AluJo SINE Alu -165 147 1 731 186 69 72 chr20 2499551 2499621 -64168384 + L1M4 LINE L1 4296 4365 -1781 2264 99 6 43 chr20 2499621 2499766 -64168239 + AluSx SINE Alu 1 150 -162 2424 74 0 7 chr20 2499766 2500062 -64167943 + AluY SINE Alu 1 294 -17 2264 99 6 43 chr20 2500062 2500240 -64167765 + AluSx SINE Alu 150 312 0 731 186 69 72 chr20 2500240 2500400 -64167605 + L1M4 LINE L1 4365 4527 -1619 1165 208 23 0 chr20 2500400 2500616 -64167389 + MER58A DNA MER1_type 1 221 -3 731 186 69 72 chr20 2500616 2500690 -64167315 + L1M4 LINE L1 4527 4600 -1546 212 307 60 53 chr20 2500690 2500784 -64167221 + MIR SINE MIR 99 196 -66 2184 98 35 0 chr20 2500784 2501071 -64166934 + AluSp SINE Alu 1 297 -16 212 307 60 53 chr20 2501071 2501126 -64166879 + MIR SINE MIR 196 249 -13 352 322 76 9 chr20 2501751 2501962 -64166043 - L1M4 LINE L1 -1210 4936 4712 737 248 142 77 chr20 2502053 2502496 -64165509 + MLT1H LTR MaLR 14 485 -64 363 310 57 7 chr20 2502573 2502801 -64165204 + L1MEc LINE L1 2152 2355 -3860 2766 197 134 41 chr20 2503707 2504443 -64163562 + MER21B LTR ERV1 1 805 -58 1788 126 74 95 chr20 2504519 2504899 -64163106 - MLT1B LTR MaLR -16 374 3 249 286 66 22 chr20 2505198 2505289 -64162716 + L1MEd LINE L1 577 671 -5448 363 260 32 76 chr20 2505358 2505476 -64162529 - HAL1b LINE L1 -963 385 263 2294 106 0 0 chr20 2505476 2505785 -64162220 - AluSx SINE Alu 0 309 1 363 260 32 76 chr20 2505785 2506007 -64161998 - HAL1b LINE L1 -1085 263 59 228 67 0 0 chr20 2506106 2506136 -64161869 + (T)n Simple_repeat Simple_repeat 1 30 0 23 0 0 0 chr20 2506992 2507015 -64160990 + AT_rich Low_complexity Low_complexity 1 23 0 2382 88 13 3 chr20 2507068 2507374 -64160631 + AluSq SINE Alu 1 309 -4 2187 124 0 0 chr20 2507516 2507853 -64160152 - AluSx SINE Alu 0 337 1 287 281 31 31 chr20 2508087 2508183 -64159822 + L2 LINE L2 3199 3294 -19 254 269 148 34 chr20 2508249 2508398 -64159607 - MIR SINE MIR -71 191 26 2246 94 10 19 chr20 2509067 2509374 -64158631 - AluSg SINE Alu -6 304 1 54 49 0 0 chr20 2509880 2509962 -64158043 + AT_rich Low_complexity Low_complexity 1 82 0 197 381 69 38 chr20 2510713 2511004 -64157001 + L2 LINE L2 2971 3270 -2 1029 140 0 0 chr20 2511012 2511190 -64156815 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 374 258 122 52 chr20 2513479 2513549 -64154456 + L1 LINE L1 4637 4701 -1445 1704 162 88 0 chr20 2513549 2513833 -64154172 + AluJo SINE Alu 1 309 -3 374 258 122 52 chr20 2513833 2514211 -64153794 + L1 LINE L1 4701 5108 -1038 29 28 0 0 chr20 2514226 2514262 -64153743 + AT_rich Low_complexity Low_complexity 1 36 0 2181 108 7 0 chr20 2514270 2514556 -64153449 + AluSx SINE Alu 5 292 -20 201 121 0 0 chr20 2515327 2515360 -64152645 + (TC)n Simple_repeat Simple_repeat 2 34 0 258 314 66 16 chr20 2515468 2515589 -64152416 + MIR3 SINE MIR 36 162 -46 333 221 19 32 chr20 2515672 2515826 -64152179 + GA-rich Low_complexity Low_complexity 3 154 0 771 213 55 40 chr20 2516669 2516815 -64151190 + MER3 DNA MER1_type 5 156 -53 2835 93 63 28 chr20 2516815 2516936 -64151069 - L1MA4 LINE L1 -4 6296 6181 2083 147 0 0 chr20 2516936 2517236 -64150769 - AluSx SINE Alu -12 300 1 2835 93 63 28 chr20 2517236 2517577 -64150428 - L1MA4 LINE L1 -119 6181 5818 771 213 55 40 chr20 2517577 2517632 -64150373 + MER3 DNA MER1_type 156 209 0 298 264 0 72 chr20 2517977 2518102 -64149903 - MER103 DNA DNA -1 165 50 367 214 34 0 chr20 2518195 2518284 -64149721 - MER96 DNA MER1_type? -83 92 1 1264 253 57 38 chr20 2518305 2518728 -64149277 - LTR47B LTR ERVL 0 443 13 1121 181 0 0 chr20 2519156 2519333 -64148672 + AluJb SINE Alu 135 311 -1 1158 174 4 85 chr20 2519343 2519602 -64148403 + MLT1D-int LTR MaLR 423 660 -711 919 273 5 0 chr20 2519661 2519870 -64148135 + MLT1D-int LTR MaLR 674 883 -488 908 209 5 56 chr20 2520012 2520227 -64147778 + MLT1D-int LTR MaLR 961 1164 -207 632 228 62 113 chr20 2520228 2520306 -64147699 + MLT1D LTR MaLR 111 191 -314 2410 88 0 3 chr20 2520306 2520611 -64147394 + AluSg SINE Alu 1 304 -6 632 228 62 113 chr20 2520611 2520707 -64147298 + MLT1D LTR MaLR 191 290 -215 1493 108 5 0 chr20 2520707 2520911 -64147094 + AluSg/x SINE Alu 94 298 -12 632 228 62 113 chr20 2520911 2521151 -64146854 + MLT1D LTR MaLR 290 505 0 1825 216 68 44 chr20 2521151 2521610 -64146395 - Cheshire DNA MER1_type -1909 511 42 2221 105 0 40 chr20 2521611 2521934 -64146071 + AluSx SINE Alu 1 310 -2 299 248 20 12 chr20 2522040 2522228 -64145777 - MIR SINE MIR -20 242 89 685 186 83 0 chr20 2522255 2522411 -64145594 + MER3 DNA MER1_type 9 130 -79 2179 109 10 3 chr20 2522481 2522775 -64145230 + AluSx SINE Alu 1 296 -16 615 205 342 13 chr20 2523709 2523943 -64144062 - LTR16C LTR ERVL -2 489 179 257 214 18 0 chr20 2524257 2524313 -64143692 + L2 LINE L2 3200 3256 -16 585 264 81 78 chr20 2524565 2525062 -64142943 - L1ME3A LINE L1 -115 6553 6056 308 253 114 40 chr20 2525115 2525344 -64142661 - L1ME LINE L1 -4944 780 403 1483 236 275 13 chr20 2525396 2525858 -64142147 - MLT1G1 LTR MaLR 0 595 13 2385 139 37 49 chr20 2526017 2526449 -64141556 - LTR3 LTR ERVK 0 429 3 566 276 100 49 chr20 2526622 2527013 -64140992 - L1ME LINE L1 -5658 412 2 2326 111 0 0 chr20 2527111 2527409 -64140596 + AluSx SINE Alu 1 298 -14 412 306 91 26 chr20 2527435 2527667 -64140338 - L1ME3A LINE L1 -1603 5041 4795 2266 124 27 24 chr20 2527673 2528045 -64139960 + THE1C LTR MaLR 1 373 -2 2652 34 0 0 chr20 2528046 2528340 -64139665 + AluY SINE Alu 1 294 -17 666 303 17 6 chr20 2528800 2528975 -64139030 - MER91A DNA MER1_type -1 195 19 948 247 9 9 chr20 2529014 2529237 -64138768 + MER58A DNA MER1_type 1 223 -1 7401 211 55 62 chr20 2529446 2529765 -64138240 - L1M4c LINE L1 -3520 3124 2804 1679 187 13 16 chr20 2529765 2530070 -64137935 + AluJo SINE Alu 1 304 -8 7401 211 55 62 chr20 2530070 2531247 -64136758 - L1M4c LINE L1 -3840 2804 1620 1565 120 5 0 chr20 2531247 2531463 -64136542 - AluSg/x SINE Alu -12 298 82 7401 211 55 62 chr20 2531463 2531810 -64136195 - L1M4c LINE L1 -5024 1620 1272 2320 95 10 3 chr20 2531810 2532114 -64135891 - AluSg SINE Alu -4 306 1 7401 211 55 62 chr20 2532114 2533204 -64134801 - L1M4c LINE L1 -5372 1272 5 183 275 0 66 chr20 2533878 2533969 -64134036 + MIR SINE MIR 66 150 -112 190 162 27 0 chr20 2534658 2534695 -64133310 + MIR SINE MIR 86 123 -139 357 24 0 0 chr20 2535685 2535727 -64132278 + (CA)n Simple_repeat Simple_repeat 2 43 0 1983 93 56 15 chr20 2535844 2536136 -64131869 - AluSc SINE Alu 0 303 1 2286 92 7 3 chr20 2536332 2536627 -64131378 + AluSx SINE Alu 1 296 -16 302 246 36 9 chr20 2536958 2537068 -64130937 + MIR SINE MIR 137 249 -13 7159 118 60 23 chr20 2537087 2537285 -64130720 + Tigger3b DNA MER2_type 3 192 -2836 2417 52 0 52 chr20 2537285 2537594 -64130411 + AluY SINE Alu 1 293 -18 7159 118 60 23 chr20 2537594 2538131 -64129874 + Tigger3b DNA MER2_type 192 708 -2320 2309 83 0 3 chr20 2538131 2538420 -64129585 - AluSg SINE Alu -22 288 1 7159 118 60 23 chr20 2538420 2538864 -64129141 + Tigger3b DNA MER2_type 708 1227 -4 275 61 0 0 chr20 2538964 2538997 -64129008 + U2 snRNA snRNA 1 33 -155 2051 108 3 46 chr20 2539215 2539521 -64128484 - AluSx SINE Alu -19 293 1 510 230 62 19 chr20 2539608 2539769 -64128236 - MLT1J2 LTR MaLR -14 436 269 1887 148 25 0 chr20 2541035 2541312 -64126693 + AluJo SINE Alu 1 284 -28 592 171 99 9 chr20 2541326 2541437 -64126568 + FLAM_C SINE Alu 2 122 -21 3033 179 29 22 chr20 2542724 2543277 -64124728 - MLT1F1 LTR MaLR 0 567 11 2514 96 0 0 chr20 2543328 2543640 -64124365 + AluSx SINE Alu 1 312 0 266 203 25 63 chr20 2543903 2543982 -64124023 - LTR16A1 LTR ERVL -379 78 3 275 287 48 115 chr20 2544130 2544228 -64123777 + L1MEd LINE L1 509 612 -5593 2625 138 16 36 chr20 2544228 2544671 -64123334 - Tigger2a DNA MER2_type 0 434 1 275 287 48 115 chr20 2544671 2544731 -64123274 + L1MEd LINE L1 612 652 -5553 2151 124 7 0 chr20 2544731 2545029 -64122976 + AluSp SINE Alu 1 300 -13 275 287 48 115 chr20 2545029 2545078 -64122927 + L1MEd LINE L1 652 703 -5502 327 301 109 0 chr20 2545078 2545261 -64122744 + L1MEd LINE L1 2167 2369 -4027 1820 143 35 11 chr20 2545263 2545549 -64122456 + AluJb SINE Alu 1 293 -19 265 295 62 16 chr20 2545824 2545953 -64122052 + MIR SINE MIR 127 261 -1 393 0 0 20 chr20 2546340 2546389 -64121616 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2244 92 7 0 chr20 2546389 2546671 -64121334 - AluSx SINE Alu -28 284 1 854 111 0 22 chr20 2547386 2547521 -64120484 - MER46A DNA MER2_type 0 236 105 584 80 0 10 chr20 2547522 2547622 -64120383 + L1MA3 LINE L1 5268 5366 -939 1098 113 7 0 chr20 2547622 2547772 -64120233 + AluSq/x SINE Alu 1 151 -162 1754 100 80 12 chr20 2547775 2547873 -64120132 + AluSg SINE Alu 35 125 -185 2405 66 0 7 chr20 2547873 2548230 -64119775 + AluY SINE Alu 1 311 0 1754 100 80 12 chr20 2548230 2548381 -64119624 + AluSg SINE Alu 125 301 -9 355 59 59 0 chr20 2548382 2548433 -64119572 + L1MA3 LINE L1 5778 5831 -474 1088 104 0 0 chr20 2548433 2548568 -64119437 + AluSq/x SINE Alu 1 135 -177 1762 160 35 3 chr20 2548568 2548855 -64119150 + AluJo SINE Alu 1 296 -16 194 189 0 0 chr20 2548981 2549018 -64118987 - L2 LINE L2 -13 3300 3264 234 234 0 0 chr20 2549030 2549077 -64118928 + L2 LINE L2 3226 3272 0 325 260 106 0 chr20 2549083 2549187 -64118818 - MIR SINE MIR -55 153 39 302 304 163 11 chr20 2549195 2549379 -64118626 - MLT1H1 LTR MaLR -10 545 334 245 219 0 16 chr20 2549988 2550052 -64117953 + (TA)n Simple_repeat Simple_repeat 2 64 0 1876 90 94 4 chr20 2550128 2550394 -64117611 - AluSx SINE Alu 0 312 23 208 139 0 0 chr20 2551213 2551249 -64116756 + (A)n Simple_repeat Simple_repeat 1 36 0 332 207 96 67 chr20 2552293 2552428 -64115577 + MER5B DNA MER1_type 5 143 -35 2129 87 24 13 chr20 2552880 2553178 -64114827 - AluSg SINE Alu -9 301 1 285 29 0 0 chr20 2560403 2560437 -64107568 + (TG)n Simple_repeat Simple_repeat 1 34 0 1854 100 0 4 chr20 2560440 2560680 -64107325 - AluSx SINE Alu -30 282 44 880 221 86 60 chr20 2561069 2561440 -64106565 + MLT1C LTR MaLR 44 467 0 2013 118 9 43 chr20 2561762 2561900 -64106105 + AluSx SINE Alu 1 142 -170 2300 99 0 13 chr20 2561900 2562203 -64105802 + AluSg SINE Alu 3 301 -9 2013 118 9 43 chr20 2562203 2562387 -64105618 + AluSx SINE Alu 142 312 0 1333 140 15 0 chr20 2564079 2564279 -64103726 + AluJb SINE Alu 87 289 -23 2073 40 84 71 chr20 2564291 2564587 -64103418 - AluY SINE Alu -11 300 1 387 322 76 12 chr20 2564664 2564835 -64103170 + MER5A DNA MER1_type 7 188 -1 1793 81 0 0 chr20 2565274 2565495 -64102510 - AluSx SINE Alu -91 221 1 1320 208 41 19 chr20 2566119 2566437 -64101568 + Charlie4a DNA MER1_type 17 341 -167 1228 191 37 0 chr20 2566443 2566658 -64101347 - AluJo SINE Alu -8 304 82 411 221 39 79 chr20 2566666 2566708 -64101297 + Charlie4a DNA MER1_type 387 429 -1532 2443 64 10 3 chr20 2566708 2567005 -64101000 - AluY SINE Alu -12 299 1 411 221 39 79 chr20 2567005 2567089 -64100916 + Charlie4a DNA MER1_type 429 508 0 953 224 40 0 chr20 2567282 2567510 -64100495 - LTR16A1 LTR ERVL 0 457 221 452 213 9 19 chr20 2567547 2567655 -64100350 - LTR16A1 LTR ERVL -332 125 19 36 0 0 0 chr20 2568470 2568506 -64099499 + AT_rich Low_complexity Low_complexity 1 36 0 225 0 0 0 chr20 2568587 2568612 -64099393 + (CA)n Simple_repeat Simple_repeat 2 26 0 412 226 117 109 chr20 2568655 2568815 -64099190 - L1MC4a LINE L1 -1886 5922 5765 1639 94 150 4 chr20 2568815 2569069 -64098936 - AluSx SINE Alu -11 291 1 412 226 117 109 chr20 2569069 2569152 -64098853 - L1MC4a LINE L1 -2043 5765 5674 1190 107 107 10 chr20 2569152 2569358 -64098647 + MER30 DNA MER1_type 4 229 -1 412 226 117 109 chr20 2569358 2569370 -64098635 - L1MC4a LINE L1 -2134 5674 5664 557 312 138 30 chr20 2569427 2569853 -64098152 - MLT1L LTR MaLR 0 615 144 748 245 18 0 chr20 2569860 2570023 -64097982 - MER5B DNA MER1_type -12 166 1 387 224 41 0 chr20 2570063 2570161 -64097844 - MLT1J LTR MaLR 0 511 410 593 192 64 8 chr20 2570164 2570289 -64097716 + AluJb SINE Alu 2 133 -179 609 257 90 37 chr20 2570289 2570534 -64097471 - MLT1J LTR MaLR -92 419 162 2405 115 0 0 chr20 2570928 2571232 -64096773 - AluSx SINE Alu -8 304 1 1217 198 93 28 chr20 2571260 2571584 -64096421 + LTR40c LTR ERVL 108 452 -13 399 220 70 10 chr20 2571605 2571705 -64096300 + HERVL40 LTR ERVL 1 106 -5424 497 263 77 13 chr20 2571879 2572035 -64095970 + HERVL40 LTR ERVL 917 1082 -4448 2005 149 26 0 chr20 2572135 2572437 -64095568 - AluJb SINE Alu -2 310 1 411 245 20 10 chr20 2572458 2572560 -64095445 + HERVL40 LTR ERVL 1279 1381 -4149 624 261 68 31 chr20 2572819 2573041 -64094964 + HERVL40 LTR ERVL 1377 1606 -3924 2296 104 0 0 chr20 2573096 2573394 -64094611 + AluSg SINE Alu 1 298 -12 2250 113 7 0 chr20 2573526 2573818 -64094187 + AluSx SINE Alu 1 294 -18 925 210 58 15 chr20 2573840 2574045 -64093960 - AluJo SINE Alu -45 267 54 1535 152 45 38 chr20 2574083 2574373 -64093632 - AluJo SINE Alu -20 292 1 1894 114 7 61 chr20 2574385 2574740 -64093265 - AluSx SINE Alu 0 339 1 9353 241 65 57 chr20 2574746 2575155 -64092850 + HERVL40 LTR ERVL 2684 3088 -2442 2440 93 0 10 chr20 2575155 2575466 -64092539 + AluSx SINE Alu 1 308 -4 9353 241 65 57 chr20 2575466 2575871 -64092134 + HERVL40 LTR ERVL 3088 3488 -2042 2042 126 61 0 chr20 2575871 2576165 -64091840 + AluSq SINE Alu 1 312 -1 9353 241 65 57 chr20 2576165 2578158 -64089847 + HERVL40 LTR ERVL 3488 5514 -16 1760 219 30 10 chr20 2578206 2578612 -64089393 + LTR40c LTR ERVL 39 452 -13 213 352 7 55 chr20 2578640 2578702 -64089303 - L2 LINE L2 -2886 428 365 1299 195 48 72 chr20 2578702 2579010 -64088995 - MLT1B LTR MaLR 0 390 93 2514 75 10 0 chr20 2579010 2579318 -64088687 - AluY SINE Alu 0 311 1 1299 195 48 72 chr20 2579318 2579409 -64088596 - MLT1B LTR MaLR -297 93 1 213 352 7 55 chr20 2579409 2579491 -64088514 - L2 LINE L2 -2949 365 291 824 200 85 0 chr20 2579527 2579692 -64088313 - AluJb SINE Alu -125 187 9 2384 83 3 0 chr20 2579875 2580177 -64087828 + AluY SINE Alu 1 303 -8 1142 267 29 22 chr20 2580181 2580567 -64087438 + L1ME3 LINE L1 5773 6161 -1 21 0 0 0 chr20 2580570 2580591 -64087414 + AT_rich Low_complexity Low_complexity 1 21 0 1695 163 3 68 chr20 2580673 2580803 -64087202 + AluJb SINE Alu 1 138 -174 2125 118 14 7 chr20 2580803 2581099 -64086906 - AluSq SINE Alu -15 298 1 1695 163 3 68 chr20 2581099 2581294 -64086711 + AluJb SINE Alu 138 305 -7 525 169 0 23 chr20 2581297 2581427 -64086578 + GA-rich Low_complexity Low_complexity 3 129 0 1380 62 0 0 chr20 2581427 2581606 -64086399 + (GAA)n Simple_repeat Simple_repeat 2 180 0 584 238 50 19 chr20 2581703 2581863 -64086142 - MER63A DNA MER1_type 0 210 46 7527 28 5 0 chr20 2581873 2582811 -64085194 - L1PA5 LINE L1 -1362 4784 3842 7100 39 8 1 chr20 2582811 2584183 -64083822 + L1PA5 LINE L1 4777 6154 0 2108 112 49 3 chr20 2584485 2584772 -64083233 - AluSx SINE Alu -12 300 1 497 143 74 175 chr20 2585075 2585264 -64082741 - MER69A DNA AcHobo -7 170 1 572 139 35 26 chr20 2585439 2585554 -64082451 - AluSg/x SINE Alu -12 298 183 240 219 319 8 chr20 2585783 2585902 -64082103 - MIR SINE MIR -60 202 47 2320 91 0 3 chr20 2585926 2586224 -64081781 + AluSx SINE Alu 4 300 -12 364 208 0 0 chr20 2586448 2586520 -64081485 - AluJo SINE Alu -114 188 117 915 121 0 8 chr20 2586539 2586671 -64081334 - AluSq/x SINE Alu -182 131 1 206 244 0 0 chr20 2586712 2586753 -64081252 + (TATATG)n Simple_repeat Simple_repeat 3 43 0 1905 137 13 19 chr20 2588155 2588469 -64079536 + AluJo SINE Alu 1 312 0 244 85 43 0 chr20 2589917 2589964 -64078041 - LTR66 LTR ERVL -171 439 391 537 191 9 0 chr20 2590597 2590702 -64077303 - MER5A DNA MER1_type -80 109 4 248 239 11 67 chr20 2591844 2592024 -64075981 + C-rich Low_complexity Low_complexity 2 171 0 252 0 0 0 chr20 2592030 2592058 -64075947 + (CGG)n Simple_repeat Simple_repeat 3 30 0 206 233 44 25 chr20 2592090 2592249 -64075756 + (CGG)n Simple_repeat Simple_repeat 3 164 0 222 118 0 0 chr20 2592307 2592341 -64075664 + (CCG)n Simple_repeat Simple_repeat 1 34 0 189 0 0 0 chr20 2592399 2592420 -64075585 + (CGGG)n Simple_repeat Simple_repeat 4 24 0 25 0 0 0 chr20 2592443 2592468 -64075537 + GC_rich Low_complexity Low_complexity 1 25 0 280 216 45 23 chr20 2594190 2594278 -64073727 - L1ME4a LINE L1 -67 6054 5965 2117 141 0 0 chr20 2595415 2595737 -64072268 + AluSx SINE Alu 1 322 0 2792 33 0 0 chr20 2596489 2596795 -64071210 + AluY SINE Alu 1 306 -5 1517 207 80 13 chr20 2599191 2599568 -64068437 + LTR16C LTR ERVL 90 491 0 2086 128 21 0 chr20 2601377 2601667 -64066338 + AluJo SINE Alu 1 296 -16 1734 161 70 3 chr20 2602219 2602505 -64065500 + AluJb SINE Alu 1 305 -7 1159 142 0 0 chr20 2602514 2602669 -64065336 + FRAM SINE Alu 1 154 -22 870 191 9 3 chr20 2602678 2602899 -64065106 + AluJb SINE Alu 2 293 -19 2481 196 22 12 chr20 2602959 2603464 -64064541 - MLT1F LTR MaLR -32 510 1 477 0 0 0 chr20 2605011 2605064 -64062941 + (CA)n Simple_repeat Simple_repeat 1 53 0 492 245 108 72 chr20 2605826 2606075 -64061930 - LTR16A1 LTR ERVL -176 281 24 993 146 0 19 chr20 2607816 2607974 -64060031 + FRAM SINE Alu 18 172 -4 358 281 89 0 chr20 2607982 2608128 -64059877 + L1ME3A LINE L1 5945 6103 -67 2199 130 0 3 chr20 2608129 2608428 -64059577 + AluSx SINE Alu 1 298 -14 209 170 0 43 chr20 2608750 2608797 -64059208 + CT-rich Low_complexity Low_complexity 2 46 0 244 220 0 17 chr20 2609101 2609160 -64058845 + GA-rich Low_complexity Low_complexity 3 60 0 1788 178 0 4 chr20 2609400 2609675 -64058330 - AluJb SINE Alu -38 274 1 1123 257 81 66 chr20 2609845 2610085 -64057920 - L1MC4a LINE L1 -1633 6175 5940 1930 150 0 21 chr20 2610085 2610406 -64057599 + AluJb SINE Alu 1 315 0 1123 257 81 66 chr20 2610406 2610843 -64057162 - L1MC4a LINE L1 -1868 5940 5485 6312 250 132 25 chr20 2610845 2613328 -64054677 - L2 LINE L2 -1 3312 566 455 216 82 30 chr20 2613364 2613498 -64054507 - L1MC4a LINE L1 -2353 5455 5315 384 152 0 0 chr20 2613502 2613568 -64054437 + CT-rich Low_complexity Low_complexity 2 67 0 2050 141 10 0 chr20 2613568 2613873 -64054132 - AluJo SINE Alu 0 312 5 22 56 0 0 chr20 2614214 2614250 -64053755 + AT_rich Low_complexity Low_complexity 1 36 0 990 251 172 27 chr20 2614457 2614968 -64053037 - L1ME2 LINE L1 -209 6024 5440 2203 106 0 0 chr20 2614968 2615274 -64052731 - AluSx SINE Alu 0 306 1 981 191 12 6 chr20 2615293 2615466 -64052539 + AluJb SINE Alu 129 302 -10 2480 70 0 7 chr20 2615471 2615772 -64052233 + AluSp SINE Alu 2 300 -13 882 287 83 36 chr20 2615788 2616376 -64051629 - L1ME2 LINE L1 -1074 5141 4526 616 242 104 90 chr20 2616412 2616747 -64051258 - L2 LINE L2 0 3313 2974 438 256 175 3 chr20 2616751 2617036 -64050969 - L1ME2 LINE L1 -1723 4492 4159 2491 87 0 0 chr20 2617036 2617334 -64050671 - AluSg SINE Alu -12 298 1 4494 235 50 22 chr20 2617338 2618311 -64049694 - L1ME2 LINE L1 -2309 3906 2881 1973 169 0 0 chr20 2618311 2618485 -64049520 - AluJb SINE Alu -5 307 131 2271 112 6 10 chr20 2618485 2618798 -64049207 - AluSx SINE Alu 0 312 1 1973 169 0 0 chr20 2618798 2618930 -64049075 - AluJb SINE Alu -180 132 1 4494 235 50 22 chr20 2618930 2619351 -64048654 - L1ME2 LINE L1 -3334 2881 2473 1788 83 9 4 chr20 2619392 2619621 -64048384 - AluSq SINE Alu -83 230 1 3850 247 100 89 chr20 2619627 2620686 -64047319 - L1ME2 LINE L1 -4205 2191 1145 2378 95 0 0 chr20 2620686 2620980 -64047025 - AluSx SINE Alu -18 294 1 3850 247 100 89 chr20 2620980 2621283 -64046722 - L1ME2 LINE L1 -5251 1145 847 766 178 0 15 chr20 2621283 2621418 -64046587 - FLAM_A SINE Alu -2 140 8 3850 247 100 89 chr20 2621418 2621997 -64046008 - L1ME2 LINE L1 -5549 847 88 189 0 0 0 chr20 2621997 2622018 -64045987 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 3850 247 100 89 chr20 2622018 2622071 -64045934 - L1ME2 LINE L1 -6308 88 37 256 233 14 0 chr20 2622065 2622138 -64045867 - L1MEd LINE L1 -3267 2862 2789 * 390 285 88 45 chr20 2622146 2622564 -64045441 - L1MEd LINE L1 -3475 2654 2209 2706 35 3 0 chr20 2622564 2622874 -64045131 - AluY SINE Alu 0 311 1 390 285 88 45 chr20 2622874 2622968 -64045037 - L1MEd LINE L1 -3920 2209 2120 233 194 42 0 chr20 2622970 2623042 -64044963 - L1MA9 LINE L1 0 6312 6238 375 284 42 102 chr20 2623048 2623284 -64044721 - L1MEd LINE L1 -4170 2140 1919 851 240 43 34 chr20 2623292 2623500 -64044505 - MER63A DNA MER1_type 0 210 1 24 32 0 0 chr20 2623559 2623590 -64044415 + AT_rich Low_complexity Low_complexity 1 31 0 1056 273 67 52 chr20 2623646 2623849 -64044156 - L1MEd LINE L1 -4652 1658 1460 1918 172 3 0 chr20 2623849 2624146 -64043859 + AluJo SINE Alu 2 299 -13 1056 273 67 52 chr20 2624146 2624976 -64043029 - L1MEd LINE L1 -4850 1460 557 342 358 33 33 chr20 2625245 2625460 -64042545 - L1M4 LINE L1 -1146 5000 4786 402 138 0 0 chr20 2625481 2625539 -64042466 + AluJ/FLAM SINE Alu 2 59 -253 1373 217 4 14 chr20 2625544 2625821 -64042184 + AluJo SINE Alu 24 297 -15 4120 145 50 80 chr20 2625995 2626563 -64041442 - L1MB2 LINE L1 0 6171 5645 1173 187 20 49 chr20 2626563 2626809 -64041196 + MER8 DNA MER2_type 1 239 0 4120 145 50 80 chr20 2626809 2627267 -64040738 - L1MB2 LINE L1 -526 5645 5175 1275 200 118 52 chr20 2627969 2628434 -64039571 + Charlie4a DNA MER1_type 13 508 0 377 216 220 52 chr20 2629034 2629284 -64038721 - LTR16A1 LTR ERVL -16 441 150 1184 234 106 14 chr20 2629350 2629773 -64038232 - MLT1C LTR MaLR 0 467 6 2320 110 0 0 chr20 2630121 2630422 -64037583 - AluSc SINE Alu -8 301 1 303 228 179 14 chr20 2630444 2630589 -64037416 - MLT1J2 LTR MaLR 0 450 282 362 254 29 29 chr20 2630729 2630867 -64037138 - MLT1J LTR MaLR -369 142 5 1519 197 48 65 chr20 2631208 2631327 -64036678 - L1M4 LINE L1 -3565 3079 2959 1732 167 0 63 chr20 2631327 2631645 -64036360 - AluJb SINE Alu -12 300 3 1519 197 48 65 chr20 2631645 2632058 -64035947 - L1M4 LINE L1 -3685 2959 2596 255 182 18 18 chr20 2632056 2632111 -64035894 - L1MC1 LINE L1 -49 6284 6230 * 6298 211 29 53 chr20 2632101 2632943 -64035062 - L1M4 LINE L1 -4478 2168 1308 1351 108 80 0 chr20 2632943 2633156 -64034849 + MER30 DNA MER1_type 1 230 0 6298 211 29 53 chr20 2633156 2633352 -64034653 - L1M4 LINE L1 -5338 1308 1109 1966 152 3 3 chr20 2633352 2633642 -64034363 + AluJb SINE Alu 2 291 -21 6298 211 29 53 chr20 2633642 2634801 -64033204 - L1M4 LINE L1 -5537 1109 16 201 280 27 27 chr20 2634857 2634932 -64033073 - L3 LINE CR1 -780 797 723 * 288 290 46 53 chr20 2634929 2635060 -64032945 - L2 LINE L2 -27 3245 3116 784 202 101 5 chr20 2635161 2635349 -64032656 + MER3 DNA MER1_type 4 209 0 2662 45 0 6 chr20 2636193 2636504 -64031501 + AluY SINE Alu 1 309 -2 300 269 45 74 chr20 2636614 2636830 -64031175 + MIR SINE MIR 27 234 -28 2168 103 24 3 chr20 2636914 2637206 -64030799 + AluSx SINE Alu 1 298 -14 218 255 20 0 chr20 2638784 2638835 -64029170 + L2 LINE L2 3262 3313 0 746 160 0 89 chr20 2639192 2639256 -64028749 - MER3 DNA MER1_type 0 209 141 2345 92 0 0 chr20 2639256 2639548 -64028457 + AluSx SINE Alu 1 292 -20 746 160 0 89 chr20 2639548 2639652 -64028353 - MER3 DNA MER1_type -68 141 56 929 170 251 12 chr20 2639866 2640189 -64027816 - LTR16A1 LTR ERVL -2 455 56 1948 150 3 7 chr20 2640254 2640547 -64027458 + AluJb SINE Alu 1 292 -20 235 294 78 20 chr20 2641398 2641500 -64026505 + MIR SINE MIR 45 152 -56 209 250 0 0 chr20 2642374 2642418 -64025587 + L2 LINE L2 3044 3087 -185 586 218 16 171 chr20 2642656 2642977 -64025028 - LTR37B LTR ERV1 0 468 198 280 227 147 0 chr20 2643037 2643112 -64024893 - L1MA4A LINE L1 -28 6275 6190 644 207 42 11 chr20 2643116 2643293 -64024712 - L1MA4A LINE L1 -181 6122 5951 1548 74 0 0 chr20 2643293 2643482 -64024523 - AluSq SINE Alu 0 313 125 644 207 42 11 chr20 2643482 2643517 -64024488 - L1MA4A LINE L1 -352 5951 5919 242 133 173 40 chr20 2643539 2643614 -64024391 - LTR37B LTR ERV1 -270 198 114 2077 164 0 0 chr20 2643705 2644017 -64023988 - AluSx SINE Alu 0 312 1 1386 158 75 7 chr20 2644018 2644297 -64023708 - MER33 DNA MER1_type -26 298 1 656 204 118 13 chr20 2644305 2644457 -64023548 - MER5A DNA MER1_type 0 189 22 1769 111 51 63 chr20 2646236 2646552 -64021453 + AluSx SINE Alu 1 312 0 24 32 0 0 chr20 2648751 2648782 -64019223 + GC_rich Low_complexity Low_complexity 1 31 0 180 111 0 0 chr20 2650248 2650275 -64017730 + (GGAGAA)n Simple_repeat Simple_repeat 6 32 0 188 194 129 32 chr20 2650666 2650728 -64017277 + L2 LINE L2 3245 3312 -1 180 0 0 0 chr20 2651023 2651043 -64016962 + (CGGGG)n Simple_repeat Simple_repeat 5 24 0 27 81 0 0 chr20 2651235 2651297 -64016708 + GC_rich Low_complexity Low_complexity 1 62 0 24 103 0 0 chr20 2651471 2651558 -64016447 + GC_rich Low_complexity Low_complexity 1 87 0 185 314 0 0 chr20 2652683 2652734 -64015271 - L2 LINE L2 -8 3264 3214 186 195 13 143 chr20 2655472 2655549 -64012456 - MIR3 SINE MIR -28 180 114 184 266 0 78 chr20 2655829 2655893 -64012112 + L2 LINE L2 3255 3313 0 279 256 156 0 chr20 2656065 2656155 -64011850 + MER103 DNA DNA 61 164 -2 983 204 107 89 chr20 2656866 2656890 -64011115 - LTR37B LTR ERV1 -15 453 431 1863 151 0 31 chr20 2656890 2657206 -64010799 + AluJb SINE Alu 1 307 0 983 204 107 89 chr20 2657206 2657619 -64010386 - LTR37B LTR ERV1 -37 431 6 1506 212 35 32 chr20 2660564 2660937 -64007068 + MLT1A2 LTR MaLR 1 374 0 1494 263 26 35 chr20 2661703 2662167 -64005838 - LTR16C LTR ERVL 0 491 32 628 112 10 10 chr20 2662793 2662891 -64005114 + FLAM_A SINE Alu 31 128 -14 526 240 16 0 chr20 2662891 2663016 -64004989 + L1M4 LINE L1 4912 5038 -1108 270 0 0 0 chr20 2663526 2663556 -64004449 + (TG)n Simple_repeat Simple_repeat 2 31 0 1575 122 110 28 chr20 2663556 2663810 -64004195 - AluJo SINE Alu -34 278 4 2111 131 10 13 chr20 2663836 2664149 -64003856 - AluJb SINE Alu 0 312 1 2080 107 28 31 chr20 2664302 2664591 -64003414 + AluSx SINE Alu 2 289 -23 28 29 0 0 chr20 2664598 2664633 -64003372 + AT_rich Low_complexity Low_complexity 1 35 0 1116 254 43 15 chr20 2664633 2665027 -64002978 - L1M4 LINE L1 -1056 5090 4686 875 175 0 0 chr20 2665027 2665170 -64002835 - FLAM_C SINE Alu 0 143 1 2007 242 104 19 chr20 2665172 2665269 -64002736 - L1M4 LINE L1 -1433 4713 4626 1727 134 4 4 chr20 2665269 2665522 -64002483 + AluSx SINE Alu 51 303 -9 2007 242 104 19 chr20 2665522 2666243 -64001762 - L1M4 LINE L1 -1520 4626 3826 1863 120 4 0 chr20 2666304 2666554 -64001451 - AluSx SINE Alu -61 251 1 2047 137 10 3 chr20 2668177 2668470 -63999535 - AluJo SINE Alu -17 295 1 973 252 114 26 chr20 2668507 2668927 -63999078 - LTR16A1 LTR ERVL 0 457 1 2229 88 0 7 chr20 2669463 2669793 -63998212 + AluSx SINE Alu 1 328 0 3460 188 67 175 chr20 2670104 2670191 -63997814 + L1MD2 LINE L1 5 100 -6440 1680 140 63 14 chr20 2670191 2670477 -63997528 + AluJo SINE Alu 11 310 -2 3460 188 67 175 chr20 2670477 2671409 -63996596 + L1MD2 LINE L1 100 1131 -5409 1122 129 0 35 chr20 2671409 2671579 -63996426 - FRAM SINE Alu -15 161 1 3460 188 67 175 chr20 2671579 2671640 -63996365 + L1MD2 LINE L1 1131 1197 -5343 2503 70 3 0 chr20 2671640 2671939 -63996066 + AluSp SINE Alu 1 300 -13 3460 188 67 175 chr20 2671939 2672429 -63995576 + L1MD2 LINE L1 1197 1551 -4989 1990 181 3 0 chr20 2672429 2672738 -63995267 + AluJb SINE Alu 1 310 -2 3460 188 67 175 chr20 2672738 2672779 -63995226 + L1MD2 LINE L1 1551 1595 -4945 2377 95 7 0 chr20 2672849 2673154 -63994851 - AluSc SINE Alu -2 307 1 1956 164 7 0 chr20 2673158 2673457 -63994548 - AluJo SINE Alu -11 301 1 1734 129 126 0 chr20 2673691 2673977 -63994028 - AluSx SINE Alu 0 318 1 241 220 40 0 chr20 2674108 2674158 -63993847 - MER91 DNA MER1_type -12 178 127 1703 309 40 6 chr20 2674238 2674743 -63993262 - HERV16 LTR ERVL -1925 3071 2550 1628 230 25 77 chr20 2674755 2675240 -63992765 + L1MD2 LINE L1 4250 4759 -1781 1775 167 10 10 chr20 2675240 2675540 -63992465 + AluJo SINE Alu 1 300 -12 1628 230 25 77 chr20 2675540 2675660 -63992345 + L1MD2 LINE L1 4759 4884 -1656 1775 171 42 36 chr20 2675660 2675880 -63992125 - MLT1B LTR MaLR 0 390 166 2223 109 7 0 chr20 2675880 2676174 -63991831 - AluSx SINE Alu -11 301 6 1775 171 42 36 chr20 2676174 2676339 -63991666 - MLT1B LTR MaLR -224 166 3 1628 230 25 77 chr20 2676339 2676508 -63991497 + L1MD2 LINE L1 4884 4928 -1612 2176 109 7 0 chr20 2676508 2676823 -63991182 - AluSg SINE Alu 0 317 1 1628 230 25 77 chr20 2676823 2677008 -63990997 + L1MD2 LINE L1 4928 5121 -1419 2366 109 0 0 chr20 2677047 2677349 -63990656 - AluSx SINE Alu -10 302 1 4683 159 28 57 chr20 2677359 2677404 -63990601 - L1MB4 LINE L1 -2 6178 6133 701 200 0 15 chr20 2677404 2677539 -63990466 - FLAM_A SINE Alu 0 133 1 4683 159 28 57 chr20 2677539 2678179 -63989826 - L1MB4 LINE L1 -47 6133 5476 2119 140 7 0 chr20 2678179 2678487 -63989518 - AluSx SINE Alu -2 310 1 4683 159 28 57 chr20 2678487 2678666 -63989339 - L1MB4 LINE L1 -704 5476 5293 2432 35 35 7 chr20 2678666 2678953 -63989052 + AluY SINE Alu 1 295 -16 4683 159 28 57 chr20 2678953 2679353 -63988652 - L1MB4 LINE L1 -887 5293 4924 1860 212 32 4 chr20 2679339 2679806 -63988199 + L1MD2 LINE L1 5113 5592 -948 * 3651 188 61 42 chr20 2680463 2681457 -63986548 + L1MD2 LINE L1 5583 6545 -208 237 292 0 0 chr20 2681506 2681571 -63986434 + L1MD3 LINE L1 7798 7862 -133 1214 129 40 49 chr20 2681574 2681648 -63986357 - MLT1B LTR MaLR 0 390 317 2205 125 0 0 chr20 2681648 2681943 -63986062 + AluSx SINE Alu 2 296 -16 1214 129 40 49 chr20 2681943 2682093 -63985912 - MLT1B LTR MaLR -73 317 168 707 185 37 0 chr20 2682094 2682229 -63985776 - FLAM_C SINE Alu -2 141 2 852 148 56 0 chr20 2682229 2682391 -63985614 - MLT1B LTR MaLR -216 174 4 411 207 86 9 chr20 2682392 2682508 -63985497 + L1MD2 LINE L1 6616 6740 -13 2177 121 14 3 chr20 2682508 2682805 -63985200 + AluSx SINE Alu 1 300 -12 2528 70 3 0 chr20 2682807 2683107 -63984898 + AluSp SINE Alu 3 303 -10 2433 210 85 2 chr20 2683108 2683698 -63984307 + L1ME1 LINE L1 5312 5950 -216 869 233 65 71 chr20 2683693 2683819 -63984186 - L1M4c LINE L1 -3921 2463 2338 * 2272 125 0 0 chr20 2683819 2684130 -63983875 - AluJb SINE Alu -1 311 1 869 233 65 71 chr20 2684130 2684191 -63983814 - L1M4c LINE L1 -4046 2338 2278 2413 68 0 0 chr20 2684191 2684511 -63983494 - AluSc SINE Alu 0 320 1 869 233 65 71 chr20 2684511 2684887 -63983118 - L1M4c LINE L1 -4106 2278 2025 486 151 41 27 chr20 2684898 2685044 -63982961 - L1MB8 LINE L1 0 6178 6031 601 226 0 0 chr20 2685054 2685169 -63982836 + AluJo SINE Alu 1 115 -187 931 129 57 0 chr20 2685169 2685309 -63982696 + AluJo SINE Alu 162 309 -3 922 175 5 47 chr20 2685317 2685528 -63982477 - L1MB5 LINE L1 -154 6020 5819 2203 133 0 16 chr20 2685529 2685845 -63982160 - AluSx SINE Alu -1 311 1 1164 197 21 45 chr20 2685845 2686134 -63981871 - L1M4c LINE L1 -4728 1656 1375 571 209 67 52 chr20 2686134 2686238 -63981767 + L1ME1 LINE L1 5936 6037 -129 2416 78 0 0 chr20 2686238 2686534 -63981471 - AluY SINE Alu -15 296 1 571 209 67 52 chr20 2686534 2686639 -63981366 + L1ME1 LINE L1 6037 6148 -18 1976 91 65 18 chr20 2686669 2686945 -63981060 - AluSc SINE Alu -20 289 1 1902 133 16 42 chr20 2687000 2687308 -63980697 - AluSp SINE Alu -12 301 2 574 262 47 92 chr20 2687324 2687479 -63980526 - L1ME3A LINE L1 -80 6090 5930 1783 182 0 19 chr20 2687479 2687797 -63980208 - AluJo SINE Alu 0 312 1 574 262 47 92 chr20 2687797 2687983 -63980022 - L1ME3A LINE L1 -240 5930 5773 1843 173 7 10 chr20 2687983 2688290 -63979715 - AluJb SINE Alu -6 306 1 574 262 47 92 chr20 2688290 2688416 -63979589 - L1ME3A LINE L1 -397 5773 5643 246 211 32 32 chr20 2688844 2688939 -63979066 - L1ME3A LINE L1 -914 5386 5292 * 519 279 50 84 chr20 2688928 2689027 -63978978 - L1MEd LINE L1 -4862 1257 1156 2024 157 0 13 chr20 2689027 2689332 -63978673 + AluJb SINE Alu 1 301 -11 519 279 50 84 chr20 2689332 2689347 -63978658 - L1MEd LINE L1 -4963 1156 1142 1888 137 42 0 chr20 2689347 2689632 -63978373 + AluJo SINE Alu 9 305 -7 519 279 50 84 chr20 2689632 2689884 -63978121 - L1MEd LINE L1 -4977 1142 883 183 114 0 0 chr20 2689884 2689919 -63978086 + (TA)n Simple_repeat Simple_repeat 2 36 0 1884 107 95 4 chr20 2689919 2690182 -63977823 - AluSx SINE Alu -25 287 1 519 279 50 84 chr20 2690182 2690347 -63977658 - L1MEd LINE L1 -5234 885 741 1997 102 65 0 chr20 2690585 2690860 -63977145 + AluSx SINE Alu 1 293 -19 180 0 0 0 chr20 2690860 2690880 -63977125 + (GGAA)n Simple_repeat Simple_repeat 3 22 0 476 232 21 49 chr20 2691288 2691430 -63976575 + LTR67 LTR ERVL 410 547 -10 769 244 34 21 chr20 2691509 2691743 -63976262 + L1ME3A LINE L1 5934 6170 0 313 291 30 61 chr20 2691942 2692107 -63975898 + LTR33A LTR ERVL 1 160 -363 1421 135 54 58 chr20 2692300 2692560 -63975445 - AluJb SINE Alu -53 259 1 365 235 20 10 chr20 2692565 2692667 -63975338 + LTR33A LTR ERVL 421 523 0 221 321 55 41 chr20 2698421 2698639 -63969366 + L2 LINE L2 2909 3129 -143 439 257 0 11 chr20 2699298 2699477 -63968528 + (TG)n Simple_repeat Simple_repeat 1 177 0 224 265 0 15 chr20 2699478 2699546 -63968459 + (CGTG)n Simple_repeat Simple_repeat 1 67 0 2364 157 105 0 chr20 2700101 2700560 -63967445 + MER84 LTR ERV1 1 507 0 2445 110 44 10 chr20 2700560 2700950 -63967055 + MER84-int LTR ERV1 1 403 -4551 906 141 17 57 chr20 2700922 2701099 -63966906 + MER84-int LTR ERV1 598 767 -4187 * 557 153 207 0 chr20 2701100 2701211 -63966794 + AluSp SINE Alu 2 135 -178 2063 107 0 61 chr20 2701211 2701539 -63966466 + AluSx SINE Alu 1 308 -4 6033 116 15 31 chr20 2701545 2702443 -63965562 + MER84-int LTR ERV1 755 1638 -3316 2101 106 29 0 chr20 2702443 2702744 -63965261 + AluSp SINE Alu 1 309 0 6033 116 15 31 chr20 2702744 2702835 -63965170 + MER84-int LTR ERV1 1638 1729 -3225 1099 138 6 29 chr20 2702838 2703012 -63964993 + AluSx SINE Alu 1 170 -142 2430 79 50 6 chr20 2703015 2703357 -63964648 + MER84-int LTR ERV1 4598 4954 0 2221 139 153 14 chr20 2703357 2703802 -63964203 + MER84 LTR ERV1 1 507 0 247 261 15 0 chr20 2703904 2703969 -63964036 - MIR SINE MIR -62 146 81 210 178 0 22 chr20 2704213 2704258 -63963747 + CT-rich Low_complexity Low_complexity 5 48 0 422 293 137 32 chr20 2705359 2705796 -63962209 + L2 LINE L2 2827 3309 -4 2427 88 3 0 chr20 2705973 2706279 -63961726 - AluY SINE Alu -4 307 1 448 262 54 30 chr20 2706739 2706907 -63961098 + MIR SINE MIR 29 200 -62 385 173 83 149 chr20 2707277 2707347 -63960658 + MER5A DNA MER1_type 4 77 -112 2199 91 9 61 chr20 2707347 2707676 -63960329 + AluSx SINE Alu 1 312 0 385 173 83 149 chr20 2707676 2707736 -63960269 + MER5A DNA MER1_type 77 123 -66 1792 95 13 0 chr20 2707736 2707968 -63960037 - AluSg/x SINE Alu -9 301 67 385 173 83 149 chr20 2707968 2708004 -63960001 + MER5A DNA MER1_type 123 160 -29 1020 171 40 72 chr20 2708233 2708278 -63959727 - AluJo SINE Alu -11 301 256 4467 54 3 17 chr20 2708278 2708613 -63959392 - LTR14C LTR ERVK 0 587 262 2508 59 0 7 chr20 2708613 2708919 -63959086 + AluY SINE Alu 1 304 -7 4467 54 3 17 chr20 2708919 2709178 -63958827 - LTR14C LTR ERVK -325 262 1 1020 171 40 72 chr20 2709178 2709305 -63958700 - AluJo SINE Alu -56 256 135 2426 84 3 7 chr20 2709305 2709614 -63958391 - AluSc SINE Alu -1 308 1 1020 171 40 72 chr20 2709614 2709662 -63958343 - AluJo SINE Alu -177 135 87 3529 120 22 25 chr20 2709677 2709903 -63958102 - L1PB3 LINE L1 -2 6152 5927 2439 74 7 7 chr20 2709903 2710213 -63957792 - AluY SINE Alu -1 310 1 3529 120 22 25 chr20 2710213 2710346 -63957659 - L1PB3 LINE L1 -227 5927 5795 369 0 0 0 chr20 2710346 2710387 -63957618 + (TG)n Simple_repeat Simple_repeat 1 41 0 3529 120 22 25 chr20 2710387 2710619 -63957386 - L1PB3 LINE L1 -359 5795 5562 2148 253 125 38 chr20 2710678 2710782 -63957223 - HAL1 LINE L1 -100 2407 2313 1960 155 16 7 chr20 2710782 2711086 -63956919 - AluSq SINE Alu 0 313 7 2148 253 125 38 chr20 2711086 2712029 -63955976 - HAL1 LINE L1 -194 2313 1269 2557 89 0 0 chr20 2712030 2712343 -63955662 + AluSq SINE Alu 1 313 0 404 183 0 0 chr20 2712348 2712419 -63955586 + LTR16A1 LTR ERVL 372 442 -15 1917 132 146 13 chr20 2712430 2712808 -63955197 + MSTA LTR MaLR 1 428 0 291 203 0 58 chr20 2712808 2712877 -63955128 + L2 LINE L2 3207 3271 -1 196 308 208 8 chr20 2716936 2717066 -63950939 + MIR SINE MIR 57 212 -50 310 330 0 9 chr20 2717919 2718025 -63949980 + MIR SINE MIR 48 152 -110 542 253 108 0 chr20 2718700 2718802 -63949203 + MER5A DNA MER1_type 9 135 -54 2339 104 7 0 chr20 2718802 2719101 -63948904 - AluSx SINE Alu -11 301 1 542 253 108 0 chr20 2719101 2719156 -63948849 + MER5A DNA MER1_type 135 183 -6 1250 43 10 34 chr20 2721655 2721862 -63946143 + SVA Other Other 665 866 -520 6637 79 13 47 chr20 2721886 2723085 -63944920 + SVA Other Other 431 1386 0 646 289 36 27 chr20 2723310 2723611 -63944394 - L1M4 LINE L1 -1993 4153 3850 * 936 234 98 8 chr20 2723580 2723641 -63944364 - L1MC2 LINE L1 -344 5818 5764 1833 160 0 45 chr20 2723641 2723953 -63944052 - AluSx SINE Alu -14 298 1 936 234 98 8 chr20 2723953 2724217 -63943788 - L1MC2 LINE L1 -398 5764 5547 5883 217 38 33 chr20 2724399 2725323 -63942682 + L1PA8 LINE L1 3811 4729 -1443 2387 92 0 16 chr20 2725323 2725627 -63942378 + AluSq SINE Alu 1 299 -14 5883 217 38 33 chr20 2725627 2727071 -63940934 + L1PA8 LINE L1 4729 6172 0 354 274 102 80 chr20 2727059 2727333 -63940672 + L1ME1 LINE L1 5885 6164 -2 * 1555 183 3 74 chr20 2727335 2727658 -63940347 - AluJo SINE Alu -12 300 1 2249 80 3 14 chr20 2727664 2727980 -63940025 - AluY SINE Alu 0 313 1 2200 119 0 0 chr20 2728156 2728475 -63939530 - AluSq SINE Alu 0 319 1 1303 126 0 88 chr20 2728478 2728717 -63939288 - AluSg/x SINE Alu -10 302 85 749 179 14 7 chr20 2728719 2728836 -63939169 - AluSg/x SINE Alu -59 251 131 1997 120 62 3 chr20 2728836 2729128 -63938877 - AluSq SINE Alu -4 309 1 749 179 14 7 chr20 2729128 2729150 -63938855 - AluSg/x SINE Alu -179 131 111 2524 69 3 3 chr20 2729643 2729948 -63938057 - AluY SINE Alu -6 305 1 1626 173 14 21 chr20 2730136 2730420 -63937585 + AluJb SINE Alu 1 282 -30 359 281 37 55 chr20 2730450 2730614 -63937391 + L1MCa LINE L1 1938 2098 -4328 652 222 0 28 chr20 2730995 2731139 -63936866 + FLAM_C SINE Alu 2 141 -2 1971 108 79 0 chr20 2731918 2732195 -63935810 + AluSc SINE Alu 1 299 -10 219 235 39 0 chr20 2732236 2732287 -63935718 - L2 LINE L2 -5 3267 3215 210 364 10 10 chr20 2733458 2733557 -63934448 + G-rich Low_complexity Low_complexity 3 101 0 198 183 83 83 chr20 2734695 2734755 -63933250 - L2 LINE L2 -7 3306 3247 181 362 121 17 chr20 2738653 2738827 -63929178 + L2 LINE L2 2693 2884 -430 2047 120 21 3 chr20 2739090 2739381 -63928624 - AluSx SINE Alu -16 296 1 795 196 18 0 chr20 2739482 2739650 -63928355 + FAM SINE Alu 1 171 -4 2031 125 33 0 chr20 2739660 2739932 -63928073 + AluSx SINE Alu 1 281 -31 345 326 0 0 chr20 2739948 2740037 -63927968 + L1MC4 LINE L1 6614 6702 -1340 314 346 0 9 chr20 2739971 2740078 -63927927 - L1MC4 LINE L1 -1323 6719 6614 * 294 231 0 0 chr20 2740088 2740231 -63927774 + (TAGA)n Simple_repeat Simple_repeat 4 146 0 2447 102 0 0 chr20 2740478 2740783 -63927222 + AluSg SINE Alu 1 305 -5 764 222 111 34 chr20 2741230 2741437 -63926568 - MIR SINE MIR -8 254 32 492 335 119 36 chr20 2742008 2742334 -63925671 - L2 LINE L2 -216 3056 2759 324 0 0 0 chr20 2742334 2742370 -63925635 + (TG)n Simple_repeat Simple_repeat 2 37 0 492 335 119 36 chr20 2742370 2742720 -63925285 - L2 LINE L2 -513 2759 2315 321 217 0 0 chr20 2742857 2742924 -63925081 + FRAM/FAM SINE Alu 1 49 -117 3323 136 45 41 chr20 2742937 2743439 -63924566 - L1MB2 LINE L1 -7 6164 5657 2541 82 0 0 chr20 2743439 2743743 -63924262 - AluSx SINE Alu -8 304 1 3323 136 45 41 chr20 2743743 2743880 -63924125 - L1MB2 LINE L1 -514 5657 5522 229 367 64 56 chr20 2744670 2744808 -63923197 + L2 LINE L2 719 854 -2460 2411 95 0 0 chr20 2744808 2745103 -63922902 - AluSc SINE Alu -14 295 1 229 367 64 56 chr20 2745103 2745539 -63922466 + L2 LINE L2 854 1298 -2016 960 190 0 46 chr20 2745557 2745752 -63922253 - AluJb SINE Alu -1 311 126 1715 290 78 6 chr20 2745757 2746295 -63921710 - ERVL LTR ERVL -926 4838 4262 557 342 56 8 chr20 2746357 2746623 -63921382 - ERVL LTR ERVL -5042 722 444 2235 120 7 0 chr20 2746624 2746923 -63921082 - AluSp SINE Alu -10 303 3 257 226 215 57 chr20 2747306 2747366 -63920639 - LTR41 LTR ERVL 0 795 746 2172 117 0 7 chr20 2747366 2747673 -63920332 + AluSq SINE Alu 1 305 -8 2291 124 3 0 chr20 2747673 2747980 -63920025 + AluSc SINE Alu 1 308 -1 257 226 215 57 chr20 2747980 2748012 -63919993 - LTR41 LTR ERVL -49 746 720 1832 156 23 16 chr20 2748012 2748319 -63919686 + AluJb SINE Alu 1 309 -3 257 226 215 57 chr20 2748319 2748468 -63919537 - LTR41 LTR ERVL -75 720 510 1044 94 0 0 chr20 2748653 2748781 -63919224 + AluSp SINE Alu 1 128 -185 1806 88 4 0 chr20 2748782 2749008 -63918997 + AluSq SINE Alu 76 302 -11 2322 76 3 7 chr20 2749014 2749302 -63918703 + AluY SINE Alu 1 287 -24 776 164 61 18 chr20 2749583 2749748 -63918257 - LTR41 LTR ERVL -599 174 3 14495 110 40 41 chr20 2749868 2750435 -63917570 - Tigger1 DNA MER2_type 0 2418 1852 2062 129 7 0 chr20 2750435 2750745 -63917260 + AluSx SINE Alu 1 312 0 14495 110 40 41 chr20 2750745 2750991 -63917014 - Tigger1 DNA MER2_type -566 1852 1607 2266 104 0 0 chr20 2750991 2751299 -63916706 - AluSx SINE Alu -4 308 1 14495 110 40 41 chr20 2751299 2751453 -63916552 - Tigger1 DNA MER2_type -811 1607 1454 1208 189 47 47 chr20 2751453 2751565 -63916440 + AluJo SINE Alu 1 112 -200 243 0 0 0 chr20 2751565 2751592 -63916413 + (CA)n Simple_repeat Simple_repeat 2 28 0 1208 189 47 47 chr20 2751592 2751808 -63916197 + AluJo SINE Alu 111 312 0 14495 110 40 41 chr20 2751808 2751838 -63916167 - Tigger1 DNA MER2_type -964 1454 1425 2239 112 0 6 chr20 2751838 2752152 -63915853 + AluSx SINE Alu 1 312 0 14495 110 40 41 chr20 2752152 2752287 -63915718 - Tigger1 DNA MER2_type -993 1425 1291 2199 98 3 0 chr20 2752287 2752584 -63915421 - AluSg SINE Alu -12 298 1 14495 110 40 41 chr20 2752584 2753867 -63914138 - Tigger1 DNA MER2_type -1127 1291 1 316 247 66 125 chr20 2754083 2754292 -63913713 - L1M4 LINE L1 -1290 4856 4671 2211 106 3 0 chr20 2754292 2754603 -63913402 - AluSx SINE Alu 0 312 1 316 247 66 125 chr20 2754603 2754713 -63913292 - L1M4 LINE L1 -1475 4671 4556 1266 100 0 17 chr20 2754829 2755009 -63912996 - AluSg/x SINE Alu -8 302 126 1707 126 4 15 chr20 2755011 2755301 -63912704 - AluSq SINE Alu 0 313 36 274 224 96 91 chr20 2755344 2755427 -63912578 - L1P LINE L1 -1809 4337 4256 1707 152 0 40 chr20 2755427 2755723 -63912282 - AluJb SINE Alu -18 294 11 274 224 96 91 chr20 2755723 2755871 -63912134 - L1P LINE L1 -1890 4256 4105 1511 181 36 0 chr20 2756343 2756624 -63911381 + AluJo SINE Alu 1 291 -21 214 220 68 0 chr20 2757141 2757200 -63910805 + L2 LINE L2 64 126 -3188 2211 98 3 0 chr20 2760808 2761104 -63906901 + AluSx SINE Alu 2 298 -14 241 169 34 0 chr20 2761131 2761190 -63906815 + GA-rich Low_complexity Low_complexity 4 64 0 367 236 185 38 chr20 2764339 2764496 -63903509 - MIR SINE MIR -37 225 46 915 235 135 28 chr20 2765191 2765593 -63902412 - MLT1G3 LTR MaLR -51 539 16 738 136 7 102 chr20 2765596 2765743 -63902262 - FLAM_C SINE Alu 0 133 1 270 0 0 0 chr20 2765899 2765929 -63902076 + (T)n Simple_repeat Simple_repeat 1 30 0 315 241 60 65 chr20 2766364 2766580 -63901425 - L1MC4 LINE L1 -2 8040 7826 337 217 25 0 chr20 2766613 2766702 -63901303 - L1ME2 LINE L1 0 6166 6073 1995 88 10 34 chr20 2766964 2767259 -63900746 + AluSq SINE Alu 1 288 -25 2346 70 3 3 chr20 2767367 2767669 -63900336 + AluSq SINE Alu 1 302 -11 466 249 169 21 chr20 2767726 2767915 -63900090 + L2 LINE L2 3095 3311 -2 223 178 22 16 chr20 2767916 2767978 -63900027 - MIR SINE MIR -68 140 89 206 152 0 0 chr20 2770444 2770477 -63897528 + MIR SINE MIR 117 149 -113 22 0 0 0 chr20 2770664 2770686 -63897319 + GC_rich Low_complexity Low_complexity 1 22 0 36 40 0 0 chr20 2770901 2770951 -63897054 + GC_rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr20 2771618 2771647 -63896358 + AT_rich Low_complexity Low_complexity 1 29 0 247 306 36 95 chr20 2771969 2772221 -63895784 + L2 LINE L2 2695 2931 -383 219 296 163 10 chr20 2772767 2772865 -63895140 - L2 LINE L2 -17 3255 3143 218 305 203 0 chr20 2772910 2773038 -63894967 - MIR SINE MIR 0 262 109 260 314 87 50 chr20 2773109 2773351 -63894654 - L2 LINE L2 -193 3079 2829 438 273 67 57 chr20 2773880 2774089 -63893916 - L1ME2 LINE L1 -2071 5737 5527 224 284 63 32 chr20 2774172 2774267 -63893738 - MIR3 SINE MIR -36 172 88 2029 106 7 0 chr20 2774523 2774837 -63893168 - AluSp SINE Alu 0 318 3 2420 70 0 0 chr20 2775151 2775449 -63892556 + AluSc SINE Alu 1 298 -11 1844 131 20 16 chr20 2775484 2775790 -63892215 - AluJb SINE Alu -5 307 1 247 265 211 31 chr20 2775807 2776030 -63891975 - L1ME LINE L1 -356 5765 5503 286 348 22 0 chr20 2776291 2776383 -63891622 - L2 LINE L2 -40 3273 3180 565 239 148 7 chr20 2776532 2776687 -63891318 - MER5A DNA MER1_type 0 189 13 726 203 16 60 chr20 2776777 2776903 -63891102 - MER5B DNA MER1_type -1 177 60 1929 168 24 0 chr20 2776903 2777243 -63890762 + MER7A DNA MER2_type 1 346 0 726 203 16 60 chr20 2777243 2777298 -63890707 - MER5B DNA MER1_type -118 60 4 400 261 50 37 chr20 2777315 2777476 -63890529 - L2 LINE L2 -473 2841 2679 1394 187 127 197 chr20 2777501 2778025 -63889980 + Charlie7 DNA MER1_type 38 597 -2015 1594 127 54 14 chr20 2778025 2778301 -63889704 + AluJo SINE Alu 7 293 -19 1997 114 0 17 chr20 2778307 2778604 -63889401 + AluSc SINE Alu 1 292 -17 1394 187 127 197 chr20 2778604 2778800 -63889205 + Charlie7 DNA MER1_type 602 810 -1802 927 207 0 0 chr20 2778800 2778979 -63889026 - AluJo SINE Alu -16 296 118 1394 187 127 197 chr20 2778979 2778999 -63889006 + Charlie7 DNA MER1_type 810 830 -1782 2104 120 10 0 chr20 2778999 2779307 -63888698 + AluSx SINE Alu 1 311 -1 1394 187 127 197 chr20 2779307 2779560 -63888445 + Charlie7 DNA MER1_type 830 1110 -1502 1616 159 23 29 chr20 2779560 2779869 -63888136 - AluJb SINE Alu 0 312 6 1394 187 127 197 chr20 2779869 2780069 -63887936 + Charlie7 DNA MER1_type 1110 1322 -1290 1197 117 0 22 chr20 2780256 2780436 -63887569 - AluJb SINE Alu -7 305 130 646 121 0 0 chr20 2780437 2780536 -63887469 + MER46A DNA MER2_type 138 236 0 408 139 28 65 chr20 2780537 2780645 -63887360 + Charlie7 DNA MER1_type 1695 1798 -814 2783 6 0 0 chr20 2780651 2780962 -63887043 + AluY SINE Alu 1 311 0 4505 147 42 50 chr20 2781021 2782001 -63886004 - L1MB7 LINE L1 -21 6163 5195 1182 175 79 32 chr20 2781994 2782076 -63885929 - L1M4 LINE L1 -486 5692 5615 * 2348 66 27 0 chr20 2782076 2782377 -63885628 - AluY SINE Alu 0 311 3 1182 175 79 32 chr20 2782377 2782574 -63885431 - L1M4 LINE L1 -563 5615 5400 256 118 79 13 chr20 2782592 2782668 -63885337 + Charlie7 DNA MER1_type 1890 1970 -642 265 200 0 0 chr20 2782694 2782744 -63885261 + L1MC5 LINE L1 7184 7233 -728 1186 226 52 65 chr20 2782943 2783062 -63884943 + L1MC5 LINE L1 7397 7516 -445 2161 93 17 0 chr20 2783062 2783352 -63884653 + AluSg SINE Alu 1 295 -15 1186 226 52 65 chr20 2783352 2783768 -63884237 + L1MC5 LINE L1 7516 7925 -36 583 234 255 50 chr20 2783792 2783841 -63884164 + Charlie7 DNA MER1_type 1970 2008 -604 2249 80 3 37 chr20 2783841 2784165 -63883840 + AluSp SINE Alu 1 313 0 583 234 255 50 chr20 2784165 2784640 -63883365 + Charlie7 DNA MER1_type 2008 2602 -10 1746 145 26 23 chr20 2785556 2785860 -63882145 + AluJo SINE Alu 1 305 -7 1572 162 3 46 chr20 2787173 2787475 -63880530 - AluJo SINE Alu -23 289 1 532 299 72 5 chr20 2787587 2787794 -63880211 + MIR SINE MIR 34 254 -8 356 328 184 25 chr20 2787972 2788677 -63879328 + L2 LINE L2 1983 2847 -467 1128 155 23 50 chr20 2788987 2789206 -63878799 + MER2 DNA MER2_type 1 213 -132 2164 118 0 0 chr20 2789286 2789592 -63878413 + AluSx SINE Alu 1 306 -6 2322 173 9 24 chr20 2789639 2790061 -63877944 + MER47B DNA MER2_type 2 417 -1 277 210 22 116 chr20 2790364 2790502 -63877503 + L2 LINE L2 3158 3282 -31 245 333 9 26 chr20 2791627 2791741 -63876264 - MER102b DNA MER1_type 0 341 230 794 182 8 0 chr20 2791753 2791885 -63876120 - FLAM_C SINE Alu 0 133 1 2328 60 0 10 chr20 2791983 2792284 -63875721 + AluY SINE Alu 1 298 -13 1904 122 3 28 chr20 2792351 2792662 -63875343 - AluSx SINE Alu 0 304 1 1745 129 3 44 chr20 2792788 2793107 -63874898 - AluSx SINE Alu 0 307 1 490 252 82 14 chr20 2793224 2793371 -63874634 - L1M4 LINE L1 -3213 2933 2777 2254 86 0 13 chr20 2793371 2793685 -63874320 + AluSx SINE Alu 1 310 -2 4267 177 50 111 chr20 2793765 2794659 -63873346 - L1MC4 LINE L1 -70 7972 7025 2166 114 0 0 chr20 2794659 2794966 -63873039 - AluSx SINE Alu -5 307 1 4267 177 50 111 chr20 2794966 2795182 -63872823 - L1MC4 LINE L1 -1017 7025 6797 2148 107 0 35 chr20 2795182 2795365 -63872640 - AluSq SINE Alu -5 308 139 2215 52 58 3 chr20 2795365 2795656 -63872349 - AluY SINE Alu -3 308 2 2148 107 0 35 chr20 2795656 2795791 -63872214 - AluSq SINE Alu -174 139 1 4267 177 50 111 chr20 2795791 2795853 -63872152 - L1MC4 LINE L1 -1245 6797 6888 2241 92 0 0 chr20 2795853 2796147 -63871858 + AluSx SINE Alu 1 294 -18 4267 177 50 111 chr20 2796147 2796327 -63871678 - L1MC4 LINE L1 -1153 6889 6700 927 120 0 63 chr20 2796345 2796503 -63871502 + AluSx SINE Alu 25 172 -140 554 239 90 21 chr20 2796549 2796737 -63871268 - MER74A LTR ERVL -5 553 353 341 318 0 16 chr20 2796955 2797084 -63870921 - L1MC4 LINE L1 -1378 6664 6538 1938 126 0 11 chr20 2797102 2797412 -63870593 + AluSx SINE Alu 1 307 0 700 165 85 73 chr20 2797425 2797589 -63870416 - FRAM SINE Alu 0 166 1 404 256 0 0 chr20 2797722 2797808 -63870197 + Tigger6 DNA MER2_type 1 86 -1511 2295 78 0 3 chr20 2797857 2798152 -63869853 + AluSq SINE Alu 5 298 -15 2051 97 4 0 chr20 2798241 2798548 -63869457 - AluSg SINE Alu 0 308 1 2087 120 3 0 chr20 2799163 2799464 -63868541 - AluSx SINE Alu -10 302 1 1011 228 53 22 chr20 2800193 2800321 -63867684 + MIR SINE MIR 25 165 -97 1396 119 38 38 chr20 2800321 2800557 -63867448 + MER46A DNA MER2_type 1 236 0 1011 228 53 22 chr20 2800557 2800656 -63867349 + MIR SINE MIR 165 259 -3 1732 191 3 7 chr20 2800684 2800982 -63867023 + AluJo SINE Alu 1 297 -15 1562 167 20 40 chr20 2801192 2801492 -63866513 - AluJo SINE Alu -18 294 1 2222 100 7 3 chr20 2801668 2801968 -63866037 + AluSc SINE Alu 1 301 -8 1818 158 42 36 chr20 2802227 2802562 -63865443 + MER1B DNA MER1_type 1 337 0 21 0 0 0 chr20 2802775 2802796 -63865209 + AT_rich Low_complexity Low_complexity 1 21 0 2170 108 30 3 chr20 2802967 2803264 -63864741 - AluSp SINE Alu -8 305 1 7024 178 69 69 chr20 2803699 2805554 -63862451 - Cheshire DNA MER1_type -20 2400 542 605 177 123 140 chr20 2805554 2805797 -63862208 - MER8 DNA MER2_type 0 239 1 7024 178 69 69 chr20 2805797 2805888 -63862117 - Cheshire DNA MER1_type -1878 542 453 918 124 0 36 chr20 2805889 2806026 -63861979 + FLAM_C SINE Alu 1 132 -11 233 213 148 0 chr20 2806038 2806099 -63861906 - Cheshire DNA MER1_type -1953 467 398 520 221 8 30 chr20 2806155 2806286 -63861719 - Cheshire DNA MER1_type -2002 418 291 181 256 77 0 chr20 2806396 2806435 -63861570 - L2 LINE L2 -18 3254 3213 651 209 9 0 chr20 2806459 2806590 -63861415 + AluJb SINE Alu 174 305 0 1983 117 50 3 chr20 2806590 2806888 -63861117 + AluSx SINE Alu 1 312 0 417 212 71 0 chr20 2806904 2807003 -63861002 - Cheshire DNA MER1_type -2184 236 131 512 108 54 6 chr20 2807007 2807174 -63860831 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 22 80 0 0 chr20 2807185 2807235 -63860770 + AT_rich Low_complexity Low_complexity 1 50 0 412 44 44 81 chr20 2807235 2807537 -63860468 + (TA)n Simple_repeat Simple_repeat 1 290 0 289 79 110 12 chr20 2807559 2807723 -63860282 + (TA)n Simple_repeat Simple_repeat 1 180 0 28 0 0 0 chr20 2807730 2807758 -63860247 + AT_rich Low_complexity Low_complexity 1 28 0 810 136 268 132 chr20 2807759 2807873 -63860132 - AluJo SINE Alu 0 302 205 2486 68 10 7 chr20 2807873 2808183 -63859822 - AluY SINE Alu 0 311 1 810 136 268 132 chr20 2808183 2808333 -63859672 - AluJo SINE Alu -97 205 2 25 51 0 0 chr20 2808373 2808412 -63859593 + AT_rich Low_complexity Low_complexity 1 39 0 1905 155 0 14 chr20 2809239 2809535 -63858470 + AluJb SINE Alu 1 292 -20 2004 136 0 13 chr20 2809616 2809924 -63858081 + AluJb SINE Alu 1 304 -8 234 220 20 0 chr20 2809977 2810027 -63857978 + MER3 DNA MER1_type 41 91 -118 * 351 174 47 23 chr20 2810001 2810087 -63857918 - MER3 DNA MER1_type -120 89 2 234 111 37 19 chr20 2810241 2810295 -63857710 - L1MC4 LINE L1 0 8042 7988 2184 125 0 7 chr20 2810372 2810676 -63857329 + AluSx SINE Alu 1 302 -10 3749 214 101 19 chr20 2810757 2811724 -63856281 - L1MC4 LINE L1 -372 7670 6595 315 0 0 0 chr20 2811724 2811759 -63856246 + (TG)n Simple_repeat Simple_repeat 2 36 0 3749 214 101 19 chr20 2811759 2811918 -63856087 - L1MC4 LINE L1 -1447 6595 6451 999 268 7 30 chr20 2812017 2812286 -63855719 - MER82 DNA MER2_type 0 653 391 865 122 6 72 chr20 2812286 2812357 -63855648 - L1MB5 LINE L1 -287 5887 5813 924 188 11 23 chr20 2812357 2812533 -63855472 - FAM SINE Alu 0 175 2 865 122 6 72 chr20 2812533 2812642 -63855363 - L1MB5 LINE L1 -361 5813 5719 1551 150 108 95 chr20 2812645 2812984 -63855021 - L1MB5 LINE L1 -748 5398 5065 1652 156 54 4 chr20 2812984 2813260 -63854745 + AluSx SINE Alu 1 290 -22 1551 150 108 95 chr20 2813260 2813312 -63854693 - L1MB5 LINE L1 -1081 5065 5015 1992 126 3 13 chr20 2813312 2813613 -63854392 - AluJb SINE Alu -6 306 9 1551 150 108 95 chr20 2813613 2813748 -63854257 - L1MB5 LINE L1 -1131 5015 4864 358 269 0 15 chr20 2813749 2813844 -63854161 + AluJ/FLAM SINE Alu 5 80 -222 781 175 91 0 chr20 2813850 2814004 -63854001 + FRAM SINE Alu 1 167 -9 1100 169 14 25 chr20 2814004 2814226 -63853779 - L1MB5 LINE L1 -1291 4855 4637 2270 92 3 3 chr20 2814226 2814520 -63853485 - AluSx SINE Alu -2 310 17 1100 169 14 25 chr20 2814520 2814544 -63853461 - L1MB5 LINE L1 -1509 4637 4614 444 235 54 7 chr20 2814775 2814924 -63853081 - L1MEd LINE L1 -5922 197 42 765 164 25 0 chr20 2814969 2815091 -63852914 + FLAM_A SINE Alu 1 125 -8 2108 101 0 0 chr20 2815110 2815387 -63852618 + AluSg1 SINE Alu 24 300 -9 523 177 113 40 chr20 2815469 2815593 -63852412 - FLAM_A SINE Alu 0 133 1 575 267 53 65 chr20 2816067 2816329 -63851676 + MIR SINE MIR 4 262 0 282 243 135 0 chr20 2816747 2816821 -63851184 - L2 LINE L2 -26 3246 3163 546 159 62 9 chr20 2816823 2816936 -63851069 - FRAM SINE Alu -13 163 45 1298 209 95 0 chr20 2817082 2817388 -63850617 + MER58B DNA MER1_type 4 338 -3 421 189 32 162 chr20 2817610 2817795 -63850210 - MER5B DNA MER1_type -1 177 17 180 0 0 0 chr20 2818601 2818621 -63849384 + (T)n Simple_repeat Simple_repeat 1 20 0 278 329 89 0 chr20 2818928 2819086 -63848919 - LTR16A LTR ERVL -3 447 276 913 196 16 21 chr20 2819187 2819376 -63848629 - MER20 DNA MER1_type -1 218 31 225 0 0 0 chr20 2819613 2819638 -63848367 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 2191 89 0 7 chr20 2819638 2819920 -63848085 - AluSx SINE Alu -32 280 1 2110 124 10 0 chr20 2819923 2820213 -63847792 - AluSx SINE Alu -19 293 1 1142 207 50 0 chr20 2820214 2820436 -63847569 - AluJo SINE Alu -21 291 59 21 0 0 0 chr20 2820681 2820702 -63847303 + AT_rich Low_complexity Low_complexity 1 21 0 197 262 24 0 chr20 2820726 2820768 -63847237 + MER5B DNA MER1_type 7 49 -129 2250 106 3 3 chr20 2820795 2821097 -63846908 + AluSq SINE Alu 1 302 -11 1236 225 58 81 chr20 2821172 2821415 -63846590 + L1ME3 LINE L1 5541 5788 -374 1691 144 53 14 chr20 2821415 2821699 -63846306 + AluSg SINE Alu 1 295 -15 1236 225 58 81 chr20 2821699 2821962 -63846043 + L1ME3 LINE L1 5788 6037 -125 2311 102 0 0 chr20 2821962 2822257 -63845748 - AluSc SINE Alu -14 295 1 1236 225 58 81 chr20 2822257 2822282 -63845723 + L1ME3 LINE L1 6037 6061 -101 3427 131 20 70 chr20 2822303 2822810 -63845195 - L1MB3 LINE L1 -12 6171 5707 2208 115 6 13 chr20 2822810 2823124 -63844881 + AluSx SINE Alu 1 312 0 3427 131 20 70 chr20 2823124 2823318 -63844687 - L1MB3 LINE L1 -476 5707 5505 1298 170 186 45 chr20 2823492 2823891 -63844114 - MLT1C LTR MaLR -2 465 11 238 218 0 0 chr20 2823884 2823939 -63844066 + AluJ/monomer SINE Alu 247 301 -1 * 192 152 0 0 chr20 2824012 2824045 -63843960 + CT-rich Low_complexity Low_complexity 2 34 0 2312 108 0 6 chr20 2824055 2824369 -63843636 - AluSx SINE Alu 0 312 1 706 71 152 0 chr20 2824369 2824481 -63843524 - AluSc SINE Alu -176 133 5 2090 116 0 0 chr20 2825010 2825286 -63842719 + AluSx SINE Alu 5 280 -32 195 100 0 0 chr20 2825286 2825316 -63842689 + (CAAT)n Simple_repeat Simple_repeat 4 33 0 539 204 32 82 chr20 2825322 2825398 -63842607 - HAL1 LINE L1 -796 1711 1633 207 0 0 0 chr20 2825398 2825421 -63842584 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1975 84 103 0 chr20 2825423 2825686 -63842319 - AluY SINE Alu -21 290 1 539 204 32 82 chr20 2825686 2825826 -63842179 - HAL1 LINE L1 -875 1632 1503 286 259 26 0 chr20 2825981 2826097 -63841908 - HAL1 LINE L1 -1279 1228 1110 1807 161 47 3 chr20 2826097 2826395 -63841610 - AluJb SINE Alu -1 311 1 1047 82 7 7 chr20 2826395 2826530 -63841475 - AluJb SINE Alu -177 135 1 1498 158 18 52 chr20 2826798 2826821 -63841184 + MLT1B LTR MaLR 74 96 -294 1939 180 0 0 chr20 2826821 2827121 -63840884 + AluJo SINE Alu 1 300 -12 1498 158 18 52 chr20 2827121 2827425 -63840580 + MLT1B LTR MaLR 96 390 0 1981 154 103 19 chr20 2827725 2828154 -63839851 - MLT1C LTR MaLR -2 465 1 198 284 32 42 chr20 2828359 2828454 -63839551 + MER5A DNA MER1_type 57 150 -39 261 0 0 0 chr20 2828997 2829026 -63838979 + (TG)n Simple_repeat Simple_repeat 2 30 0 633 164 119 22 chr20 2829028 2829162 -63838843 - FRAM SINE Alu -30 146 1 212 226 189 0 chr20 2829171 2829224 -63838781 + L2 LINE L2 3208 3270 -2 285 317 30 10 chr20 2829259 2829360 -63838645 + L2 LINE L2 3208 3310 -3 317 227 117 12 chr20 2830441 2830604 -63837401 - L1MC/D LINE L1 -2322 5486 5307 1932 147 3 22 chr20 2830695 2830714 -63837291 - AluSx SINE Alu -5 307 289 288 0 0 0 chr20 2830714 2830746 -63837259 + (TTGG)n Simple_repeat Simple_repeat 4 35 0 1932 147 3 22 chr20 2830746 2831039 -63836966 - AluSx SINE Alu -23 289 1 1526 165 8 12 chr20 2831419 2831674 -63836331 - AluJb SINE Alu -49 263 10 246 152 152 0 chr20 2831850 2831929 -63836076 - L1MD3 LINE L1 0 7995 7905 2229 116 3 0 chr20 2831948 2832250 -63835755 - AluSx SINE Alu -9 303 1 3239 119 10 54 chr20 2832322 2832848 -63835157 - L1MA8 LINE L1 -181 6110 5612 1141 189 96 62 chr20 2832848 2833013 -63834992 - AluJo SINE Alu -1 301 120 2098 120 0 13 chr20 2833013 2833312 -63834693 + AluSq SINE Alu 3 297 -16 1141 189 96 62 chr20 2833312 2833437 -63834568 - AluJo SINE Alu -182 120 1 3239 119 10 54 chr20 2833437 2833507 -63834498 - L1MA8 LINE L1 -679 5612 5540 2675 193 141 83 chr20 2833561 2833606 -63834399 - L1MDb LINE L1 -3890 2650 2609 845 148 0 15 chr20 2833606 2833741 -63834264 - FLAM_C SINE Alu 0 133 1 1818 155 3 43 chr20 2833747 2834051 -63833954 - AluJb SINE Alu -20 292 1 2675 193 141 83 chr20 2834051 2834396 -63833609 - L1MDb LINE L1 -3935 2605 2281 2335 105 0 3 chr20 2834396 2834700 -63833305 - AluSc SINE Alu -5 304 2 2675 193 141 83 chr20 2834700 2835315 -63832690 - L1MDb LINE L1 -4259 2281 1703 796 182 0 0 chr20 2835315 2835436 -63832569 + FLAM_C SINE Alu 1 121 -12 2675 193 141 83 chr20 2835436 2835455 -63832550 - L1MDb LINE L1 -4837 1703 1687 2207 117 0 3 chr20 2835455 2835762 -63832243 - AluSx SINE Alu -4 308 3 2675 193 141 83 chr20 2835762 2836359 -63831646 - L1MDb LINE L1 -4853 1687 956 264 279 73 22 chr20 2836438 2836574 -63831431 - L1MDb LINE L1 -5596 934 792 816 244 29 77 chr20 2836800 2837103 -63830902 - L1MDb LINE L1 -6181 359 76 2360 84 0 10 chr20 2837103 2837414 -63830591 + AluSq SINE Alu 1 308 -5 816 244 29 77 chr20 2837414 2837487 -63830518 - L1MDb LINE L1 -6464 76 1 714 200 0 15 chr20 2837598 2837733 -63830272 - FLAM_A SINE Alu 0 133 1 271 346 0 0 chr20 2837764 2837842 -63830163 + MER58 DNA MER1_type 1 78 -263 671 165 9 0 chr20 2837843 2837958 -63830047 - AluJb SINE Alu -15 297 182 625 183 107 0 chr20 2837984 2838115 -63829890 + MER58 DNA MER1_type 142 2365 -55 2281 83 6 22 chr20 2838292 2838604 -63829401 - AluSx SINE Alu 0 312 6 565 308 125 76 chr20 2838797 2839368 -63828637 + L2 LINE L2 2654 3251 -21 215 204 45 0 chr20 2839334 2839378 -63828627 + MIR SINE MIR 214 259 -3 * 351 351 32 5 chr20 2839422 2839607 -63828398 - L1MEd LINE L1 -2235 3894 3705 284 305 17 17 chr20 2839659 2839836 -63828169 - L1MEd LINE L1 -3835 2294 2118 422 198 69 0 chr20 2839863 2839964 -63828041 + MLT2D LTR ERVL 189 296 -118 33 43 0 0 chr20 2839985 2840032 -63827973 + AT_rich Low_complexity Low_complexity 1 47 0 962 97 141 22 chr20 2840087 2840272 -63827733 - Tigger7 DNA MER2_type 0 2487 2281 554 149 0 91 chr20 2840400 2840521 -63827484 + Tigger7 DNA MER2_type 2478 2587 0 27 92 0 0 chr20 2840521 2840597 -63827408 + AT_rich Low_complexity Low_complexity 1 76 0 1121 220 25 28 chr20 2840614 2840896 -63827109 - MLT2D LTR ERVL -114 300 20 1135 202 12 8 chr20 2840896 2841143 -63826862 - ERVL-D LTR ERVL -1 5763 5516 1142 255 85 51 chr20 2841185 2841318 -63826687 - MLT1H LTR MaLR -1 548 421 2257 119 0 3 chr20 2841318 2841620 -63826385 - AluSx SINE Alu -11 301 1 1142 255 85 51 chr20 2841620 2842016 -63825989 - MLT1H LTR MaLR -128 421 1 532 284 20 47 chr20 2842065 2842473 -63825532 - L1MEd LINE L1 -4908 1211 952 270 0 0 0 chr20 2842861 2842891 -63825114 + (TG)n Simple_repeat Simple_repeat 2 31 0 180 0 0 0 chr20 2842902 2842922 -63825083 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 1984 151 0 0 chr20 2842925 2843209 -63824796 + AluSx SINE Alu 1 284 -28 185 197 16 0 chr20 2843209 2843270 -63824735 + (TA)n Simple_repeat Simple_repeat 1 62 0 2510 75 0 0 chr20 2843846 2844154 -63823851 + AluSg SINE Alu 1 308 -2 2448 71 0 3 chr20 2845950 2846259 -63821746 + AluY SINE Alu 3 310 -1 206 121 0 0 chr20 2846581 2846614 -63821391 + (T)n Simple_repeat Simple_repeat 1 33 0 823 136 24 16 chr20 2846745 2846870 -63821135 - FLAM_C SINE Alu -17 126 1 764 276 81 25 chr20 2846873 2847395 -63820610 - L1M4 LINE L1 -1990 4156 3606 401 302 124 34 chr20 2847409 2847635 -63820370 - L1M4 LINE L1 -2614 3532 3277 2438 53 0 17 chr20 2847635 2847935 -63820070 + AluY SINE Alu 1 295 -16 401 302 124 34 chr20 2847935 2847973 -63820032 - L1M4 LINE L1 -2869 3277 3244 538 269 19 54 chr20 2848080 2848340 -63819665 - L1ME1 LINE L1 -15 6151 5901 2253 93 3 7 chr20 2848367 2848677 -63819328 - AluY SINE Alu -1 310 2 1660 221 93 14 chr20 2848694 2849137 -63818868 + MER74A LTR ERVL 77 554 -4 2064 93 68 0 chr20 2849137 2849417 -63818588 + AluSc SINE Alu 1 299 -10 1213 211 34 10 chr20 2849417 2849821 -63818184 - L1ME1 LINE L1 -583 5583 5170 4035 130 24 42 chr20 2849822 2850521 -63817484 - L1MB3 LINE L1 -7 6176 5489 2266 113 3 0 chr20 2850521 2850831 -63817174 - AluY SINE Alu 0 311 1 4035 130 24 42 chr20 2850831 2850876 -63817129 - L1MB3 LINE L1 -694 5489 5445 1854 147 51 0 chr20 2850877 2851169 -63816836 - AluSg SINE Alu -3 307 1 180 0 0 0 chr20 2851172 2851192 -63816813 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1716 138 33 53 chr20 2851197 2851356 -63816649 - AluJo SINE Alu -14 298 146 2408 76 13 3 chr20 2851356 2851657 -63816348 - AluSq SINE Alu -9 304 1 1716 138 33 53 chr20 2851657 2851801 -63816204 - AluJo SINE Alu -166 146 1 2237 227 52 5 chr20 2851801 2852421 -63815584 - L1MB3 LINE L1 -814 5332 4684 192 375 62 28 chr20 2853409 2853697 -63814308 + L2 LINE L2 2593 2890 -424 328 173 0 0 chr20 2853880 2853976 -63814029 + AluJ/FRAM SINE Alu 232 327 0 1245 244 128 28 chr20 2853979 2854282 -63813723 - L1MC/D LINE L1 -2029 5779 5419 2458 70 0 0 chr20 2854282 2854580 -63813425 + AluY SINE Alu 1 298 -13 1245 244 128 28 chr20 2854580 2854706 -63813299 - L1MC/D LINE L1 -2389 5419 5307 207 259 82 24 chr20 2854759 2854844 -63813161 - L2 LINE L2 -1520 1794 1705 471 316 116 48 chr20 2854983 2855726 -63812279 - L2 LINE L2 -1856 1458 666 2252 82 6 79 chr20 2855817 2856147 -63811858 + AluSx SINE Alu 1 306 -6 4845 180 66 29 chr20 2856878 2856949 -63811056 - L1MC1 LINE L1 -2 6331 6264 2082 150 0 0 chr20 2856949 2857249 -63810756 + AluSg SINE Alu 1 300 -10 4845 180 66 29 chr20 2857249 2857528 -63810477 - L1MC1 LINE L1 -69 6264 5997 2488 55 7 0 chr20 2857528 2857821 -63810184 - AluY SINE Alu -12 299 5 1731 186 7 7 chr20 2857825 2858115 -63809890 - AluJo SINE Alu -22 290 1 4845 180 66 29 chr20 2858115 2859504 -63808501 - L1MC1 LINE L1 -338 5995 4518 226 282 107 23 chr20 2859640 2859771 -63808234 - L1MC/D LINE L1 -1096 5050 4909 220 345 12 12 chr20 2860235 2860319 -63807686 + L2 LINE L2 3151 3234 -38 252 234 0 0 chr20 2860493 2860557 -63807448 - MER5B DNA MER1_type -18 160 97 2051 122 28 0 chr20 2860600 2860888 -63807117 + AluSx SINE Alu 3 298 -14 738 148 74 0 chr20 2860913 2861035 -63806970 + MER46A DNA MER2_type 1 131 -105 1679 184 3 14 chr20 2861035 2861328 -63806677 + AluJo SINE Alu 1 290 -22 279 258 72 0 chr20 2863139 2863236 -63804769 + MIR SINE MIR 94 197 -65 757 216 45 61 chr20 2863475 2863720 -63804285 + MIR SINE MIR 1 241 -21 1767 259 172 24 chr20 2864653 2864857 -63803148 - HAL1 LINE L1 -271 2236 2063 2078 139 0 0 chr20 2864857 2865145 -63802860 + AluJb SINE Alu 1 288 -24 1767 259 172 24 chr20 2865145 2865890 -63802115 - HAL1 LINE L1 -444 2063 1147 1652 181 10 14 chr20 2865910 2866202 -63801803 + AluJo SINE Alu 1 291 -21 1789 151 20 37 chr20 2866204 2866503 -63801502 + AluSx SINE Alu 1 294 -18 2093 116 10 0 chr20 2866531 2866823 -63801182 - AluSg SINE Alu -15 295 1 842 69 0 0 chr20 2866851 2866953 -63801052 + AluY SINE Alu 1 102 -209 2296 70 0 14 chr20 2866963 2867274 -63800731 + AluY SINE Alu 1 307 0 905 276 158 43 chr20 2867415 2868084 -63799921 - L1MC/D LINE L1 -743 5403 4908 180 0 0 0 chr20 2868084 2868104 -63799901 + (TG)n Simple_repeat Simple_repeat 2 21 0 905 276 158 43 chr20 2868104 2868615 -63799390 - L1MC/D LINE L1 -1238 4908 4457 265 332 104 23 chr20 2868618 2869103 -63798902 - L1MC/D LINE L1 -1755 4391 3855 1922 89 44 4 chr20 2869113 2869407 -63798598 - AluSg SINE Alu 0 305 1 1381 197 16 4 chr20 2869520 2869769 -63798236 - AluJo SINE Alu -48 264 13 1904 152 0 10 chr20 2870002 2870298 -63797707 - AluJb SINE Alu -19 293 1 387 293 146 40 chr20 2870298 2870701 -63797304 - L1MC/D LINE L1 -2751 3395 2950 800 260 107 85 chr20 2870714 2871170 -63796835 - MLT1J LTR MaLR -21 429 1 2312 89 3 19 chr20 2871216 2871532 -63796473 - AluY SINE Alu 0 311 1 804 211 6 6 chr20 2871542 2871703 -63796302 - AluSg/x SINE Alu -25 285 125 1934 93 4 16 chr20 2871708 2871966 -63796039 - AluSx SINE Alu -15 297 43 2395 73 0 51 chr20 2874274 2874587 -63793418 + AluSg SINE Alu 1 297 -13 1759 151 4 0 chr20 2874675 2874934 -63793071 + AluJb SINE Alu 34 293 -19 194 136 23 0 chr20 2875053 2875097 -63792908 + (TA)n Simple_repeat Simple_repeat 1 45 0 923 211 51 0 chr20 2875990 2876165 -63791840 - MER58A DNA MER1_type -39 185 2 209 304 167 42 chr20 2876268 2876436 -63791569 - MIR SINE MIR -53 209 21 366 268 59 57 chr20 2876587 2876800 -63791205 - L1MEd LINE L1 -1218 1272 963 1770 124 0 87 chr20 2876800 2877122 -63790883 - AluJo SINE Alu -18 294 1 2260 110 3 0 chr20 2877170 2877490 -63790515 - AluSp SINE Alu 0 313 1 1840 132 64 0 chr20 2877564 2877845 -63790160 + AluSx SINE Alu 1 299 -13 668 160 15 61 chr20 2877854 2877985 -63790020 + FLAM_C SINE Alu 9 133 -10 537 273 49 23 chr20 2878359 2878623 -63789382 + L1MC5 LINE L1 7513 7783 -178 974 228 39 0 chr20 2878645 2878851 -63789154 + MER20 DNA MER1_type 1 214 -5 2139 92 7 0 chr20 2879357 2879638 -63788367 - AluSg SINE Alu 0 310 28 366 272 67 56 chr20 2879754 2879934 -63788071 - L2 LINE L2 -18 3295 3114 2376 97 0 10 chr20 2879977 2880276 -63787729 - AluSg SINE Alu -14 296 1 216 307 0 0 chr20 2880288 2880363 -63787642 - MIR SINE MIR -17 245 171 1181 300 155 34 chr20 2880397 2881381 -63786624 - L2 LINE L2 -200 3072 1977 850 266 63 39 chr20 2881435 2881848 -63786157 + L2 LINE L2 1656 2078 -1236 790 284 135 31 chr20 2881855 2882412 -63785593 + L2 LINE L2 2697 3310 -3 415 300 48 32 chr20 2882408 2882658 -63785347 - L2 LINE L2 -1345 1969 1716 * 537 151 35 0 chr20 2883071 2883157 -63784848 - AluJ/FLAM SINE Alu -223 89 1 1607 185 11 0 chr20 2883163 2883481 -63784524 - AluJb SINE Alu 0 325 5 412 252 35 26 chr20 2883683 2883798 -63784207 - L2 LINE L2 -27 3286 3171 426 333 26 19 chr20 2885984 2886140 -63781865 - L2 LINE L2 -1 3271 3115 2298 88 3 0 chr20 2886432 2886717 -63781288 + AluSc SINE Alu 1 286 -23 190 368 39 45 chr20 2886989 2887014 -63780991 - L2 LINE L2 -601 2713 2689 2365 88 0 0 chr20 2887014 2887310 -63780695 + AluY SINE Alu 1 296 -15 190 368 39 45 chr20 2887310 2887439 -63780566 - L2 LINE L2 -625 2689 2560 374 252 160 28 chr20 2887462 2887710 -63780295 - MLT1L LTR MaLR -107 508 126 1661 174 3 46 chr20 2887714 2888018 -63779987 + AluJb SINE Alu 1 291 -21 225 273 153 40 chr20 2888130 2888280 -63779725 - L2 LINE L2 -566 2748 2582 2239 100 0 35 chr20 2888351 2888662 -63779343 + AluSq SINE Alu 2 301 -12 306 206 279 29 chr20 2888990 2889126 -63778879 - MER70-int LTR ERVL -1517 4137 3968 396 251 21 112 chr20 2889427 2889518 -63778487 - MER70-int LTR ERVL -2183 3471 3404 2355 99 0 0 chr20 2889518 2889820 -63778185 + AluSq SINE Alu 6 307 -6 396 251 21 112 chr20 2889820 2889915 -63778090 - MER70-int LTR ERVL -2250 3404 3302 1611 169 37 4 chr20 2890089 2890362 -63777643 + AluJo SINE Alu 1 282 -30 263 254 48 0 chr20 2890442 2890505 -63777500 - MER70-int LTR ERVL -3260 1763 1698 252 122 0 0 chr20 2891190 2891231 -63776774 + (CAGA)n Simple_repeat Simple_repeat 3 43 0 654 312 59 30 chr20 2891256 2891593 -63776412 - MER70-int LTR ERVL -3574 2080 1734 2368 98 0 0 chr20 2892126 2892423 -63775582 + AluSx SINE Alu 1 297 -15 867 142 0 0 chr20 2892576 2892696 -63775309 - FLAM_C SINE Alu -23 120 1 253 219 29 109 chr20 2893379 2893516 -63774489 - LTR67 LTR ERVL -3 554 429 529 254 202 21 chr20 2893858 2894413 -63773592 + L1MC4a LINE L1 5213 5399 -747 195 294 131 21 chr20 2894653 2894880 -63773125 + L3 LINE CR1 966 1269 -308 1327 132 26 161 chr20 2895127 2895475 -63772530 + AluJo SINE Alu 1 301 -1 237 311 146 0 chr20 2895899 2896002 -63772003 + L3 LINE CR1 1388 1505 -72 330 183 44 29 chr20 2896146 2896283 -63771722 + (TATAA)n Simple_repeat Simple_repeat 5 143 0 2520 260 121 17 chr20 2896303 2897282 -63770723 + L1ME2 LINE L1 4283 5484 -680 2101 113 0 14 chr20 2897282 2897574 -63770431 + AluSg SINE Alu 1 288 -22 2520 260 121 17 chr20 2897574 2898065 -63769940 + L1ME2 LINE L1 5484 5922 -242 21 82 0 0 chr20 2898244 2898293 -63769712 + AT_rich Low_complexity Low_complexity 1 49 0 1463 108 5 27 chr20 2899215 2899438 -63768567 + AluJo SINE Alu 85 302 -10 2357 95 3 3 chr20 2899601 2899905 -63768100 - AluSp SINE Alu -9 304 1 454 293 163 49 chr20 2899968 2900572 -63767433 + L2 LINE L2 2636 3313 0 338 307 78 42 chr20 2900587 2900779 -63767226 - L1ME LINE L1 -353 5768 5570 1664 168 32 36 chr20 2900815 2901124 -63766881 - AluJo SINE Alu -4 308 1 2361 99 0 0 chr20 2901294 2901596 -63766409 - AluSx SINE Alu -10 302 1 244 220 17 0 chr20 2901599 2901658 -63766347 - MIR SINE MIR -66 142 83 1905 161 3 10 chr20 2902554 2902859 -63765146 + AluJo SINE Alu 10 312 0 685 188 23 0 chr20 2903302 2903435 -63764570 - FLAM_C SINE Alu -6 137 2 276 232 133 33 chr20 2903458 2903473 -63764532 + Charlie7 DNA MER1_type 2446 2458 -154 1339 199 71 7 chr20 2903473 2903755 -63764250 - AluJo SINE Alu 0 302 3 276 232 133 33 chr20 2903755 2903890 -63764115 + Charlie7 DNA MER1_type 2458 2611 -1 1997 121 37 14 chr20 2903911 2904208 -63763797 - AluSx SINE Alu -8 304 1 293 240 161 60 chr20 2904265 2904532 -63763473 - L1MC4a LINE L1 -159 5962 5669 288 111 0 0 chr20 2905073 2905118 -63762887 + (TG)n Simple_repeat Simple_repeat 2 46 0 2516 108 52 70 chr20 2905449 2905890 -63762115 + L1MB3 LINE L1 5694 6126 -57 2053 77 19 71 chr20 2905890 2906200 -63761805 + AluSx SINE Alu 1 294 -18 2516 108 52 70 chr20 2906200 2906257 -63761748 + L1MB3 LINE L1 6126 6183 0 925 292 93 38 chr20 2907069 2907132 -63760873 - MLT1L LTR MaLR -4 611 553 1981 149 7 3 chr20 2907132 2907428 -63760577 - AluSx SINE Alu -15 297 1 925 292 93 38 chr20 2907428 2907625 -63760380 - MLT1L LTR MaLR -62 553 368 2742 45 0 0 chr20 2907625 2907936 -63760069 + AluY SINE Alu 1 311 0 925 292 93 38 chr20 2907936 2908252 -63759753 - MLT1L LTR MaLR -247 368 2 296 250 0 25 chr20 2908582 2908662 -63759343 - L2 LINE L2 -1 3271 3194 188 346 39 0 chr20 2908792 2908896 -63759109 - L2 LINE L2 -251 3021 2914 416 255 46 72 chr20 2908971 2909124 -63758881 - LTR67 LTR ERVL 0 557 409 381 300 61 33 chr20 2909166 2909346 -63758659 - LTR67 LTR ERVL -259 298 114 481 198 9 9 chr20 2910082 2910198 -63757807 - L1MB8 LINE L1 -15 6163 6048 582 185 62 19 chr20 2910198 2910360 -63757645 - L1MB8 LINE L1 -5 6173 6005 2274 89 24 0 chr20 2910698 2910989 -63757016 - AluSp SINE Alu -15 298 1 2195 112 0 20 chr20 2911634 2911937 -63756068 + AluSx SINE Alu 1 297 -15 2136 127 6 16 chr20 2912569 2912884 -63755121 - AluSx SINE Alu 0 312 1 1980 142 28 0 chr20 2913744 2914026 -63753979 + AluSx SINE Alu 1 290 -22 1070 251 161 24 chr20 2914117 2914668 -63753337 - HAL1 LINE L1 -221 2286 1660 271 0 25 25 chr20 2915479 2915519 -63752486 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 6821 62 16 42 chr20 2915519 2916484 -63751521 - SVA Other Other -17 1369 430 6354 67 27 11 chr20 2916546 2917386 -63750619 - SVA Other Other -520 866 13 2263 63 45 11 chr20 2917389 2917676 -63750329 - AluY SINE Alu -14 297 1 265 256 72 28 chr20 2919109 2919220 -63748785 + MIR3 SINE MIR 3 115 -114 4690 171 50 37 chr20 2920218 2921174 -63746831 + LTR5 LTR ERVK 1 969 0 945 215 25 10 chr20 2922169 2922369 -63745636 - MER58A DNA MER1_type -15 209 7 2422 97 0 0 chr20 2922451 2922750 -63745255 + AluSg SINE Alu 1 299 -11 2332 107 3 0 chr20 2922867 2923165 -63744840 + AluSx SINE Alu 2 300 -12 322 176 51 95 chr20 2923171 2923215 -63744790 - MER5A DNA MER1_type -80 109 65 2160 117 30 0 chr20 2923215 2923515 -63744490 - AluSq SINE Alu -4 309 1 322 176 51 95 chr20 2923515 2923582 -63744423 - MER5A DNA MER1_type -124 65 4 302 335 28 57 chr20 2925694 2925906 -63742099 - L3 LINE CR1 -10 1567 1362 201 322 152 43 chr20 2925917 2926128 -63741877 - L2 LINE L2 -416 2898 2665 356 263 157 67 chr20 2926228 2926395 -63741610 - L3 LINE CR1 -611 966 815 2020 133 3 13 chr20 2926395 2926718 -63741287 - AluJb SINE Alu 0 312 2 356 263 157 67 chr20 2926718 2926819 -63741186 - L3 LINE CR1 -762 815 666 2022 116 46 0 chr20 2926819 2927104 -63740901 - AluSx SINE Alu -12 300 3 356 263 157 67 chr20 2927104 2927134 -63740871 - L3 LINE CR1 -911 666 640 2230 129 20 0 chr20 2927955 2928258 -63739747 - AluSx SINE Alu -3 309 1 2148 295 171 47 chr20 2928694 2929764 -63738241 + L2 LINE L2 605 1542 -1772 2374 98 0 0 chr20 2929764 2930059 -63737946 + AluSc SINE Alu 1 295 -14 2148 295 171 47 chr20 2930059 2930892 -63737113 + L2 LINE L2 1542 2743 -571 2497 70 7 0 chr20 2930898 2931199 -63736806 + AluSp SINE Alu 1 303 -10 2192 122 7 7 chr20 2931268 2931564 -63736441 + AluSx SINE Alu 4 299 -13 408 198 79 0 chr20 2932190 2932291 -63735714 - L2 LINE L2 -4 3268 3160 193 196 87 0 chr20 2933908 2933954 -63734051 + L2 LINE L2 3219 3268 -4 184 321 99 30 chr20 2937024 2937155 -63730850 - L2 LINE L2 -228 3044 2905 2106 125 7 3 chr20 2938167 2938463 -63729542 + AluJb SINE Alu 1 297 -15 2392 92 13 0 chr20 2938465 2938771 -63729234 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr20 2938771 2938792 -63729213 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr20 2943804 2943844 -63724161 + GC_rich Low_complexity Low_complexity 1 40 0 2008 78 52 0 chr20 2944397 2944693 -63723312 + AluSx SINE Alu 1 310 0 772 221 121 5 chr20 2945452 2945651 -63722354 + MER58A DNA MER1_type 2 223 -1 2575 66 3 0 chr20 2946291 2946595 -63721410 - AluY SINE Alu -6 305 1 349 273 76 0 chr20 2947894 2948026 -63719979 - HERVL LTR ERVL -2987 2667 2526 1752 97 112 4 chr20 2948578 2948845 -63719160 + AluSx SINE Alu 1 296 -16 2254 104 3 0 chr20 2949270 2949559 -63718446 + AluSx SINE Alu 1 290 -22 1781 115 87 52 chr20 2949569 2949855 -63718150 + AluSx SINE Alu 1 296 -16 1893 166 6 29 chr20 2949993 2950307 -63717698 + AluJb SINE Alu 1 307 -5 678 235 18 54 chr20 2950623 2950844 -63717161 + MIR SINE MIR 40 252 -10 2234 79 32 7 chr20 2950849 2951160 -63716845 - AluSp SINE Alu 0 318 1 213 39 0 0 chr20 2951163 2951189 -63716816 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2478 68 3 0 chr20 2951390 2951685 -63716320 - AluSp SINE Alu -15 298 3 2441 93 0 6 chr20 2951718 2952030 -63715975 + AluSx SINE Alu 1 310 -2 328 279 18 0 chr20 2952030 2952141 -63715864 - L1MC4 LINE L1 -164 7878 7766 839 129 0 43 chr20 2952202 2952341 -63715664 - FLAM_C SINE Alu 0 133 1 1819 145 29 17 chr20 2952341 2952679 -63715326 - L1MB2 LINE L1 -346 7244 6902 1977 115 7 46 chr20 2952679 2952983 -63715022 - AluSx SINE Alu -3 309 18 248 122 41 41 chr20 2953067 2953116 -63714889 - L1MB2 LINE L1 -3400 4165 4117 2421 99 0 0 chr20 2953157 2953470 -63714535 - AluSp SINE Alu 0 313 1 405 290 21 11 chr20 2953471 2953657 -63714348 - L1MB2 LINE L1 -4345 3220 3033 894 192 59 35 chr20 2953669 2953734 -63714271 - L1MB2 LINE L1 -4903 2662 2600 1567 180 6 54 chr20 2953734 2954051 -63713954 - AluJo SINE Alu -5 307 6 894 192 59 35 chr20 2954051 2954235 -63713770 - L1MB2 LINE L1 -4965 2600 2402 926 147 0 13 chr20 2954236 2954386 -63713619 + AluSq/x SINE Alu 1 148 -164 1874 138 7 10 chr20 2954386 2954511 -63713494 + AluSq SINE Alu 10 134 -179 2753 3 0 3 chr20 2954511 2954819 -63713186 + AluYa5 SINE Alu 5 311 0 1874 138 7 10 chr20 2954819 2954989 -63713016 + AluSq SINE Alu 134 304 -9 2136 119 3 3 chr20 2955166 2955477 -63712528 - AluJb SINE Alu 0 312 2 480 356 74 13 chr20 2955496 2955827 -63712178 + ERVL LTR ERVL 2908 3287 -1927 2149 102 3 0 chr20 2955848 2956142 -63711863 - AluSx SINE Alu -2 310 16 2070 104 14 0 chr20 2956153 2956455 -63711550 - AluSq SINE Alu 0 306 1 300 75 0 57 chr20 2956456 2956509 -63711496 + L1MA9 LINE L1 6263 6312 0 1533 261 80 56 chr20 2956622 2957232 -63710773 + L1 LINE L1 1110 1734 -5475 395 223 10 0 chr20 2957263 2957366 -63710639 + L1 LINE L1 3264 3367 -3841 1499 94 163 12 chr20 2957421 2957689 -63710316 - AluSg1 SINE Alu 0 305 1 2987 159 31 64 chr20 2957756 2958523 -63709482 + L1 LINE L1 4068 4809 -2399 513 238 0 0 chr20 2958523 2958624 -63709381 - Tigger2 DNA MER2_type -10 2708 2608 4525 158 32 23 chr20 2958627 2958683 -63709322 + L1 LINE L1 5498 5552 -1656 2354 65 3 10 chr20 2958683 2958989 -63709016 + AluSg SINE Alu 3 306 -4 4525 158 32 23 chr20 2958989 2959614 -63708391 + L1 LINE L1 5552 6169 -1039 189 0 0 0 chr20 2959614 2959635 -63708370 + (CAA)n Simple_repeat Simple_repeat 1 21 0 4525 158 32 23 chr20 2959635 2959830 -63708175 + L1 LINE L1 6169 6387 -821 2363 73 7 3 chr20 2959830 2960133 -63707872 + AluSg SINE Alu 1 304 -6 4525 158 32 23 chr20 2960133 2960176 -63707829 + L1 LINE L1 6387 6428 -780 703 147 0 0 chr20 2960177 2960279 -63707726 + FRAM SINE Alu 62 163 -13 2248 80 0 10 chr20 2960279 2960581 -63707424 + AluY SINE Alu 1 299 -12 4360 63 4 0 chr20 2960585 2961124 -63706881 + SVA Other Other 839 1379 -7 449 129 9 10 chr20 2961128 2961251 -63706754 + L1M3 LINE L1 5315 5440 -860 1767 144 14 7 chr20 2961251 2961543 -63706462 + AluSx SINE Alu 1 294 -18 980 140 67 0 chr20 2961544 2961708 -63706297 + AluJb SINE Alu 133 307 -5 821 248 124 28 chr20 2961708 2961733 -63706272 + L1ME1 LINE L1 5804 5825 -341 4403 117 21 44 chr20 2961733 2962440 -63705565 - LTR8 LTR ERV1 0 691 1 821 248 124 28 chr20 2962440 2962736 -63705269 + L1ME1 LINE L1 5825 6156 -10 184 247 164 0 chr20 2962760 2962833 -63705172 + L2 LINE L2 1928 2012 -1302 805 238 97 28 chr20 2962872 2962945 -63705060 + L2 LINE L2 2140 2207 -1107 2140 109 10 0 chr20 2962945 2963248 -63704757 + AluSp SINE Alu 1 306 -7 805 238 97 28 chr20 2963248 2963464 -63704541 + L2 LINE L2 2207 2449 -865 2137 116 0 3 chr20 2963464 2963774 -63704231 - AluSx SINE Alu -3 309 1 951 156 13 0 chr20 2963780 2963934 -63704071 - AluSg/x SINE Alu -20 292 137 1070 222 226 5 chr20 2963935 2964123 -63703882 + L2 LINE L2 2439 2584 -730 2245 77 3 3 chr20 2964123 2964420 -63703585 - AluY SINE Alu -12 299 3 1070 222 226 5 chr20 2964420 2964655 -63703350 + L2 LINE L2 2584 2956 -358 239 217 0 22 chr20 2964666 2964712 -63703293 + MLT1E1 LTR MaLR 7 51 -573 1632 95 95 39 chr20 2964782 2965065 -63702940 - AluSx SINE Alu -13 299 1 292 161 0 0 chr20 2965066 2965122 -63702883 + Alu SINE Alu 243 298 -4 726 200 203 42 chr20 2965193 2965568 -63702437 + MLT1E1 LTR MaLR 123 562 -31 1893 153 0 10 chr20 2965568 2965876 -63702129 - AluJo SINE Alu -7 305 1 726 200 203 42 chr20 2965876 2965911 -63702094 + MLT1E1 LTR MaLR 562 590 -3 324 272 17 92 chr20 2965942 2966181 -63701824 + L2 LINE L2 3028 3248 -65 1217 249 143 5 chr20 2966678 2967055 -63700950 - LTR16A LTR ERVL -3 447 19 1481 96 5 36 chr20 2967164 2967384 -63700621 - AluSg/x SINE Alu -17 293 81 1099 232 51 40 chr20 2967409 2967460 -63700545 - Charlie4a DNA MER1_type -1534 427 378 2133 94 0 17 chr20 2967460 2967757 -63700248 + AluSx SINE Alu 1 292 -20 1099 232 51 40 chr20 2967757 2967796 -63700209 - Charlie4a DNA MER1_type -1583 378 341 1937 129 0 26 chr20 2967796 2968099 -63699906 - AluJo SINE Alu -17 295 1 1099 232 51 40 chr20 2968099 2968382 -63699623 - Charlie4a DNA MER1_type -1620 341 49 3079 108 76 125 chr20 2970526 2970566 -63697439 - MER4A LTR ERV1 -1 663 623 2087 128 0 0 chr20 2970566 2970863 -63697142 - AluSq SINE Alu -16 297 1 3079 108 76 125 chr20 2970863 2970895 -63697110 - MER4A LTR ERV1 -41 623 591 1956 134 3 7 chr20 2970895 2971200 -63696805 + AluSq SINE Alu 1 304 -9 3079 108 76 125 chr20 2971200 2971254 -63696751 - MER4A LTR ERV1 -73 591 536 2180 94 0 27 chr20 2971254 2971552 -63696453 - AluSg SINE Alu -20 290 1 3079 108 76 125 chr20 2971552 2972120 -63695885 - MER4A LTR ERV1 -128 536 1 524 275 80 2 chr20 2972332 2972569 -63695436 + L1ME3A LINE L1 5874 6143 -22 735 211 51 6 chr20 2972574 2972749 -63695256 - MER2 DNA MER2_type 0 345 163 1831 141 10 16 chr20 2972749 2973053 -63694952 - AluSx SINE Alu -10 302 1 1632 166 7 26 chr20 2973658 2973966 -63694039 + AluSx SINE Alu 1 302 -10 282 280 72 98 chr20 2974037 2974301 -63693704 - MLT1J2 LTR MaLR -4 446 190 1036 154 0 0 chr20 2974340 2974502 -63693503 + AluSp SINE Alu 137 298 -15 269 314 15 0 chr20 2974506 2974594 -63693411 - MLT1J2 LTR MaLR -291 155 66 2096 77 0 119 chr20 2974600 2974952 -63693053 - AluSx SINE Alu -1 311 2 1212 213 150 96 chr20 2974978 2975499 -63692506 + MLT1H LTR MaLR 1 549 0 2292 84 0 6 chr20 2976060 2976371 -63691634 - AluY SINE Alu -2 309 1 335 326 158 9 chr20 2976466 2976687 -63691318 + L1MEc LINE L1 38 291 -6105 1754 214 62 9 chr20 2976738 2977271 -63690734 + L1M4 LINE L1 4216 4776 -1370 820 210 0 56 chr20 2977271 2977466 -63690539 + AluJo SINE Alu 117 300 -12 240 200 0 0 chr20 2977466 2977511 -63690494 + L1M4 LINE L1 4800 4844 -1302 1361 127 104 0 chr20 2977511 2977731 -63690274 - AluSx SINE Alu -69 243 1 32 0 0 0 chr20 2977780 2977812 -63690193 + AT_rich Low_complexity Low_complexity 1 32 0 283 324 6 40 chr20 2978685 2978858 -63689147 + G-rich Low_complexity Low_complexity 3 169 0 233 243 66 22 chr20 2979426 2979562 -63688443 + (TCTCTG)n Simple_repeat Simple_repeat 2 143 0 22 56 0 0 chr20 2980217 2980253 -63687752 + GC_rich Low_complexity Low_complexity 1 36 0 257 111 0 0 chr20 2981152 2981188 -63686817 + tRNA-Arg-AGA tRNA tRNA 1 36 -40 480 323 21 26 chr20 2983346 2983538 -63684467 + MIR SINE MIR 24 214 -48 486 192 192 0 chr20 2983538 2983637 -63684368 + AluJo/FLAM SINE Alu 1 118 -194 2312 90 0 3 chr20 2983637 2983938 -63684067 - AluSx SINE Alu -12 300 1 28 35 0 35 chr20 2983945 2983970 -63684035 + AT_rich Low_complexity Low_complexity 1 25 -30 2004 114 7 7 chr20 2983970 2984259 -63683746 - AluSg SINE Alu -21 289 1 28 35 0 35 chr20 2984259 2984290 -63683715 + AT_rich Low_complexity Low_complexity 25 55 0 1651 155 54 0 chr20 2984302 2984579 -63683426 + AluJb SINE Alu 1 292 -20 2356 56 0 30 chr20 2984605 2984909 -63683096 + AluY SINE Alu 1 295 -16 2280 101 0 0 chr20 2984963 2985269 -63682736 - AluSq SINE Alu -7 306 1 187 355 91 21 chr20 2985666 2985852 -63682153 + L2 LINE L2 1175 1373 -1941 399 300 108 31 chr20 2985866 2986089 -63681916 - HAL1 LINE L1 -245 2262 2023 297 0 0 0 chr20 2986103 2986136 -63681869 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1539 271 72 35 chr20 2986179 2986282 -63681723 + L2 LINE L2 1824 1922 -1392 2414 74 0 6 chr20 2986282 2986594 -63681411 + AluSg SINE Alu 1 310 0 1539 271 72 35 chr20 2986594 2986663 -63681342 + L2 LINE L2 1922 1987 -1327 2487 53 0 0 chr20 2986663 2986966 -63681039 - AluY SINE Alu -8 303 1 1539 271 72 35 chr20 2986966 2987430 -63680575 + L2 LINE L2 1987 2485 -829 383 320 138 52 chr20 2987469 2987831 -63680174 + L2 LINE L2 2920 3312 -1 214 250 33 0 chr20 2987833 2987893 -63680112 + MIR SINE MIR 43 104 -104 892 149 0 8 chr20 2988217 2988391 -63679614 - FLAM_C SINE Alu 0 173 1 1880 135 36 7 chr20 2988427 2988730 -63679275 - AluJb SINE Alu 0 312 1 1714 92 0 0 chr20 2988792 2989020 -63678985 - AluSq SINE Alu -80 233 6 2245 75 0 14 chr20 2989324 2989617 -63678388 + AluSg SINE Alu 1 289 -21 2454 62 0 0 chr20 2990900 2991205 -63676800 + AluSq SINE Alu 1 305 -8 806 204 63 45 chr20 2991209 2991430 -63676575 - MIR SINE MIR -30 232 8 1644 143 6 117 chr20 2991449 2991807 -63676198 + 7SLRNA srpRNA srpRNA 1 318 -2 858 215 0 0 chr20 2991809 2991972 -63676033 + AluJo/FRAM SINE Alu 140 302 0 223 304 24 56 chr20 2992447 2992572 -63675433 - MIR SINE MIR -64 144 24 193 244 171 0 chr20 2992669 2992792 -63675213 + L2 LINE L2 2715 2858 -456 2018 136 3 3 chr20 2992880 2993181 -63674824 - AluSx SINE Alu -11 301 1 1809 151 3 10 chr20 2993275 2993573 -63674432 - AluSx SINE Alu -1 311 16 1610 173 21 21 chr20 2993579 2993868 -63674137 - AluJo SINE Alu -22 290 2 861 142 122 146 chr20 2993981 2994124 -63673881 - AluJo SINE Alu -6 306 161 2168 82 27 0 chr20 2994124 2994416 -63673589 - AluSp SINE Alu -13 300 1 2151 85 44 0 chr20 2994424 2994718 -63673287 - AluSg SINE Alu -3 307 1 2346 73 0 7 chr20 2994727 2995027 -63672978 - AluY SINE Alu -13 298 1 861 142 122 146 chr20 2995027 2995111 -63672894 - AluJo SINE Alu -166 146 66 2029 147 0 0 chr20 2995299 2995606 -63672399 + AluSx SINE Alu 2 308 -4 408 293 78 29 chr20 2995761 2995966 -63672039 - ERVL LTR ERVL -3157 2607 2393 1665 147 43 14 chr20 2996054 2996177 -63671828 + AluSq SINE Alu 14 132 -181 1947 123 45 0 chr20 2996177 2996469 -63671536 + AluY SINE Alu 1 305 -6 1665 147 43 14 chr20 2996469 2996624 -63671381 + AluSq SINE Alu 132 300 -13 2167 118 3 0 chr20 2996658 2996963 -63671042 - AluSx SINE Alu -6 306 1 962 159 0 25 chr20 2996963 2997126 -63670879 - AluJb SINE Alu -12 300 142 2074 91 0 14 chr20 2997133 2997419 -63670586 - AluSp SINE Alu -14 299 18 331 332 61 37 chr20 2997430 2997644 -63670361 - LTR16A1 LTR ERVL -235 222 4 1574 150 117 0 chr20 2997879 2998145 -63669860 - AluJo SINE Alu -15 297 1 1280 262 138 27 chr20 2998542 2998826 -63669179 - MLT1G LTR MaLR 0 590 339 2008 99 58 0 chr20 2998826 2999118 -63668887 - AluSq SINE Alu -4 309 1 1280 262 138 27 chr20 2999118 2999356 -63668649 - MLT1G LTR MaLR -251 339 10 216 250 73 0 chr20 3000754 3000822 -63667183 + MIR SINE MIR 177 249 -13 1108 246 62 0 chr20 3001063 3001372 -63666633 - L1MC/D LINE L1 -2153 5655 5328 237 119 0 0 chr20 3001480 3001522 -63666483 - AluJb SINE Alu -5 297 256 713 58 11 0 chr20 3001522 3001609 -63666396 - AluSq/x SINE Alu -193 119 32 1640 151 0 0 chr20 3001609 3001861 -63666144 - AluJb SINE Alu -60 252 1 2156 100 3 0 chr20 3001934 3002234 -63665771 - AluSx SINE Alu -11 301 1 248 308 105 15 chr20 3002329 3002462 -63665543 - L1MC/D LINE L1 -1217 4929 4785 2126 88 13 29 chr20 3002546 3002853 -63665152 - AluSq SINE Alu -11 302 1 424 181 0 0 chr20 3003389 3003461 -63664544 + MER3 DNA MER1_type 1 72 -137 538 184 18 0 chr20 3003468 3003582 -63664423 + Ricksha DNA DNA 8 123 -1058 354 155 0 48 chr20 3003566 3003650 -63664355 - Ricksha DNA DNA -1463 1783 1704 * 686 120 0 26 chr20 3003629 3003746 -63664259 - Ricksha DNA DNA -1066 115 2 653 193 89 0 chr20 3003746 3003881 -63664124 + MER3 DNA MER1_type 63 209 0 183 172 0 0 chr20 3005082 3005111 -63662894 + MER5A DNA MER1_type 51 79 -110 2352 101 0 0 chr20 3005390 3005686 -63662319 - AluSx SINE Alu -16 296 1 227 232 0 36 chr20 3005867 3005923 -63662082 + L3 LINE CR1 441 494 -1083 1960 144 45 0 chr20 3005942 3006233 -63661772 + AluJo SINE Alu 1 304 -8 975 114 0 0 chr20 3008004 3008135 -63659870 + FLAM_C SINE Alu 11 141 -2 257 338 232 3 chr20 3008861 3009163 -63658842 + L2 LINE L2 2897 3267 -5 243 217 0 0 chr20 3009402 3009462 -63658543 + GA-rich Low_complexity Low_complexity 1 60 0 2234 93 0 39 chr20 3009950 3010260 -63657745 + AluSx SINE Alu 1 298 -14 2089 107 0 74 chr20 3010270 3010596 -63657409 + AluSx SINE Alu 1 302 -10 223 324 144 35 chr20 3010617 3011132 -63656873 - L2 LINE L2 -470 2844 2216 2319 112 0 0 chr20 3011132 3011427 -63656578 + AluSq SINE Alu 3 297 -16 223 324 144 35 chr20 3011427 3011683 -63656322 - L2 LINE L2 -1098 2216 1989 2350 87 3 3 chr20 3011946 3012256 -63655749 + AluSg SINE Alu 1 310 0 2201 80 27 23 chr20 3013032 3013333 -63654672 - AluSc SINE Alu -7 302 1 2309 121 0 0 chr20 3014092 3014390 -63653615 + AluSx SINE Alu 1 298 -14 369 0 0 0 chr20 3014566 3014607 -63653398 + (CA)n Simple_repeat Simple_repeat 1 41 0 1925 129 4 4 chr20 3014680 3014960 -63653045 + AluSx SINE Alu 1 280 -32 2429 97 0 0 chr20 3014988 3015297 -63652708 + AluSx SINE Alu 1 309 -3 815 178 74 18 chr20 3015297 3015460 -63652545 + AluSg/x SINE Alu 134 305 -7 2044 149 3 0 chr20 3015469 3015765 -63652240 + AluSx SINE Alu 1 297 -15 2494 66 0 7 chr20 3015767 3016068 -63651937 + AluY SINE Alu 1 299 -12 1090 147 0 0 chr20 3016070 3016226 -63651779 + AluSg/x SINE Alu 134 289 -21 1304 207 88 76 chr20 3016375 3016820 -63651185 + MLT1E LTR MaLR 117 592 -1 2207 117 3 3 chr20 3016850 3017148 -63650857 + AluSx SINE Alu 1 298 -14 2214 101 20 3 chr20 3017350 3017646 -63650359 + AluSc SINE Alu 1 301 -8 2362 92 7 0 chr20 3017646 3017940 -63650065 + AluY SINE Alu 1 297 -14 310 239 53 53 chr20 3018856 3018969 -63649036 - L1M2 LINE L1 -6252 597 485 700 168 18 0 chr20 3020081 3020194 -63647811 + FLAM_A SINE Alu 1 115 -18 1703 155 23 58 chr20 3021184 3021493 -63646512 + AluJo SINE Alu 1 298 -14 6427 105 74 35 chr20 3021494 3023807 -63644198 + SVA Other Other 30 1386 0 433 209 0 18 chr20 3023811 3023981 -63644024 + GA-rich Low_complexity Low_complexity 1 166 0 2487 91 0 0 chr20 3024032 3024341 -63643664 + AluSq SINE Alu 1 309 -4 1257 229 85 21 chr20 3024595 3025059 -63642946 + MER20B DNA MER1_type 111 648 -135 1929 171 7 3 chr20 3025858 3026163 -63641842 + AluJo SINE Alu 1 306 -6 22 0 0 0 chr20 3027148 3027170 -63640835 + AT_rich Low_complexity Low_complexity 1 22 0 1679 151 47 25 chr20 3027227 3027556 -63640449 + AluJo SINE Alu 2 336 0 1030 191 12 0 chr20 3027614 3027787 -63640218 - FAM SINE Alu 0 175 1 909 296 132 46 chr20 3027911 3028228 -63639777 - L1M4 LINE L1 -1751 4395 4107 2295 111 3 0 chr20 3028228 3028525 -63639480 + AluSg SINE Alu 1 298 -12 909 296 132 46 chr20 3028525 3028812 -63639193 - L1M4 LINE L1 -2039 4107 3739 190 278 167 0 chr20 3028831 3028885 -63639120 - L2 LINE L2 -17 3255 3193 644 93 70 195 chr20 3028893 3029005 -63639000 + L1MC2 LINE L1 6036 6160 -184 2336 99 3 0 chr20 3029005 3029308 -63638697 + AluSx SINE Alu 1 304 -8 2077 125 0 3 chr20 3029308 3029622 -63638383 + AluSx SINE Alu 3 312 0 644 93 70 195 chr20 3029622 3029723 -63638282 + L1MC2 LINE L1 6158 6223 -121 226 154 19 0 chr20 3029733 3029785 -63638220 + L1MC2 LINE L1 6282 6334 -10 2158 115 7 3 chr20 3029820 3030116 -63637889 + AluSx SINE Alu 6 302 -10 826 157 22 8 chr20 3030117 3030251 -63637754 + AluJo SINE Alu 1 136 -176 252 235 73 0 chr20 3030854 3030922 -63637083 - L1MC4 LINE L1 -41 8001 7929 1810 140 0 56 chr20 3031014 3031335 -63636670 - AluJb SINE Alu -9 303 1 567 276 104 37 chr20 3031386 3031654 -63636351 - L1ME4a LINE L1 -158 5963 5678 770 114 0 0 chr20 3031751 3031856 -63636149 + AluSg/x SINE Alu 198 302 -10 2371 76 3 20 chr20 3031856 3032158 -63635847 + AluSq SINE Alu 1 297 -16 24 0 0 0 chr20 3032416 3032440 -63635565 + AT_rich Low_complexity Low_complexity 1 24 0 671 195 98 102 chr20 3032835 3033091 -63634914 - MER112 DNA MER1_type -1 255 1 263 224 0 40 chr20 3033097 3033173 -63634832 + L1MD2 LINE L1 6180 6252 -107 481 111 0 0 chr20 3033173 3033236 -63634769 + AluS SINE Alu 1 63 -255 225 204 0 0 chr20 3033485 3033529 -63634476 + T-rich Low_complexity Low_complexity 1 44 0 2296 122 0 3 chr20 3033622 3033933 -63634072 - AluSx SINE Alu -2 310 1 2289 104 0 0 chr20 3033945 3034233 -63633772 - AluY SINE Alu -23 288 1 1980 143 11 0 chr20 3034237 3034523 -63633482 - AluSx SINE Alu -23 289 1 999 224 102 14 chr20 3034549 3034628 -63633377 - L1MD2 LINE L1 -8 6351 6280 1748 82 55 0 chr20 3034628 3034847 -63633158 - AluSq SINE Alu -82 231 1 999 224 102 14 chr20 3034847 3035062 -63632943 - L1MD2 LINE L1 -79 6280 6031 2140 120 7 13 chr20 3035269 3035569 -63632436 + AluSx SINE Alu 1 298 -14 442 267 99 0 chr20 3035867 3035968 -63632037 + MER81 DNA DNA 3 113 -1 2102 103 0 75 chr20 3036640 3036992 -63631013 - AluSq SINE Alu 0 313 1 2140 134 0 0 chr20 3036994 3037286 -63630719 - AluSg SINE Alu -18 292 1 2426 97 0 22 chr20 3037286 3037605 -63630400 - AluSx SINE Alu 0 312 1 1094 143 6 6 chr20 3037989 3038164 -63629841 - L1PA16 LINE L1 -1 6165 5991 2430 99 0 0 chr20 3038195 3038497 -63629508 - AluSx SINE Alu -10 302 1 241 178 22 144 chr20 3038613 3038647 -63629358 + L1M4 LINE L1 3959 3996 -2150 2286 101 13 7 chr20 3038647 3038953 -63629052 + AluSp SINE Alu 4 311 -2 241 178 22 144 chr20 3038953 3039008 -63628997 + L1M4 LINE L1 3996 4037 -2109 1732 166 7 7 chr20 3039009 3039286 -63628719 + AluJo SINE Alu 1 277 -35 240 35 0 0 chr20 3039286 3039315 -63628690 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 840 143 14 14 chr20 3039318 3039458 -63628547 + AluJb SINE Alu 165 304 -8 2166 105 0 23 chr20 3039468 3039597 -63628408 + AluSx SINE Alu 11 141 -171 2246 118 0 10 chr20 3039597 3039902 -63628103 + AluSx SINE Alu 1 302 -10 2166 105 0 23 chr20 3039902 3040076 -63627929 + AluSx SINE Alu 141 307 -5 2948 171 85 154 chr20 3040086 3040376 -63627629 + L1M4 LINE L1 4033 4341 -1805 2000 136 27 13 chr20 3040376 3040677 -63627328 - AluSx SINE Alu -4 308 4 2948 171 85 154 chr20 3040677 3040796 -63627209 + L1M4 LINE L1 4341 4467 -1679 2302 82 7 3 chr20 3040796 3041088 -63626917 + AluSg1 SINE Alu 5 297 -12 1168 153 6 0 chr20 3041088 3041265 -63626740 + AluJo/FRAM SINE Alu 134 311 -1 2948 171 85 154 chr20 3041265 3041977 -63626028 + L1M4 LINE L1 4465 5242 -904 1505 176 85 4 chr20 3042439 3042711 -63625294 - AluJb SINE Alu -18 294 1 1835 179 13 0 chr20 3042711 3043013 -63624992 - AluJb SINE Alu -5 307 2 2156 125 0 0 chr20 3043042 3043338 -63624667 + AluSx SINE Alu 1 296 -16 2284 110 3 25 chr20 3043338 3043657 -63624348 + AluSx SINE Alu 1 312 0 2223 113 0 7 chr20 3047013 3047313 -63620692 + AluSx SINE Alu 1 298 -14 1373 183 97 25 chr20 3048164 3048326 -63619679 - AluJb SINE Alu -13 299 150 285 51 0 0 chr20 3048326 3048365 -63619640 + (TG)n Simple_repeat Simple_repeat 1 39 0 1373 183 97 25 chr20 3048365 3048481 -63619524 - AluJb SINE Alu -162 150 1 929 246 42 0 chr20 3048527 3048742 -63619263 + MER58A DNA MER1_type 1 224 0 668 137 11 0 chr20 3048797 3048892 -63619113 + FLAM_C SINE Alu 13 108 -35 196 51 26 26 chr20 3048899 3048938 -63619067 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 2290 107 13 7 chr20 3049101 3049411 -63618594 + AluSx SINE Alu 1 312 0 2067 98 0 73 chr20 3049477 3049792 -63618213 + AluSg SINE Alu 1 292 -18 2137 123 14 0 chr20 3049904 3050196 -63617809 + AluSx SINE Alu 1 296 -16 28 48 0 0 chr20 3050397 3050439 -63617566 + AT_rich Low_complexity Low_complexity 1 42 0 477 260 81 60 chr20 3050601 3050836 -63617169 - MIR SINE MIR -3 259 20 322 200 0 17 chr20 3050948 3051008 -63616997 + MIR3 SINE MIR 145 203 -5 1387 151 17 25 chr20 3051025 3051263 -63616742 - MER46A DNA MER2_type 0 236 1 758 236 149 65 chr20 3051390 3051678 -63616327 + HAL1 LINE L1 1745 2008 -499 1538 221 30 3 chr20 3051678 3051976 -63616029 + AluJb SINE Alu 1 306 -6 758 236 149 65 chr20 3051976 3052178 -63615827 + HAL1 LINE L1 2008 2276 -231 1211 144 0 0 chr20 3052180 3052361 -63615644 + AluSg/x SINE Alu 130 310 0 967 112 0 0 chr20 3052401 3052526 -63615479 + AluSq/x SINE Alu 12 136 -176 2165 112 3 3 chr20 3052526 3052820 -63615185 + AluSq SINE Alu 1 294 -19 319 235 0 0 chr20 3052850 3052918 -63615087 + HAL1 LINE L1 2440 2507 0 2194 116 7 10 chr20 3053452 3053755 -63614250 - AluSx SINE Alu -10 302 1 752 171 8 0 chr20 3054268 3054397 -63613608 + FLAM_C SINE Alu 11 140 -3 1509 104 5 205 chr20 3055174 3055549 -63612456 - AluJb SINE Alu -12 300 1 310 51 0 0 chr20 3055731 3055770 -63612235 + (TTTA)n Simple_repeat Simple_repeat 2 100 0 2208 60 0 3 chr20 3055770 3056052 -63611953 - AluY SINE Alu -1 319 1 437 259 0 9 chr20 3056573 3056685 -63611320 + MER5A DNA MER1_type 4 114 -75 313 315 46 23 chr20 3056728 3056858 -63611147 - MIR SINE MIR -67 195 63 2173 64 3 74 chr20 3057344 3057670 -63610335 + AluSx SINE Alu 3 305 -7 812 141 0 63 chr20 3057762 3057904 -63610101 - AluJo SINE Alu -178 134 2 1129 156 0 0 chr20 3057947 3058114 -63609891 - AluJb SINE Alu -16 296 130 227 125 0 0 chr20 3058125 3058157 -63609848 + Alu SINE Alu 1 32 -269 1428 101 10 19 chr20 3058161 3058368 -63609637 + AluSg/x SINE Alu 75 279 -31 382 218 100 9 chr20 3059072 3059182 -63608823 + MLT1L LTR MaLR 168 287 -328 31 0 0 0 chr20 3059972 3060003 -63608002 + AT_rich Low_complexity Low_complexity 1 31 0 288 0 0 0 chr20 3064709 3064741 -63603264 + (CAGCT)n Simple_repeat Simple_repeat 3 34 0 271 345 17 9 chr20 3065170 3065286 -63602719 + MIR SINE MIR 63 179 -83 428 217 217 0 chr20 3066377 3066520 -63601485 - MER96 DNA MER1_type? -1 174 1 1990 136 3 7 chr20 3066875 3067183 -63600822 + AluSx SINE Alu 1 307 -5 2178 87 13 3 chr20 3067487 3067785 -63600220 + AluSx SINE Alu 2 302 -10 2033 126 0 10 chr20 3067791 3068100 -63599905 + AluSx SINE Alu 6 311 -1 1096 97 30 18 chr20 3068795 3068960 -63599045 + AluSg/x SINE Alu 133 299 -11 226 365 0 0 chr20 3069382 3069478 -63598527 + L2 LINE L2 2651 2746 -568 201 326 90 0 chr20 3069495 3069584 -63598421 + MIR SINE MIR 16 112 -96 25 65 0 0 chr20 3070808 3070854 -63597151 + GC_rich Low_complexity Low_complexity 1 46 0 368 286 203 12 chr20 3072236 3072477 -63595528 - HAL1b LINE L1 -626 722 436 1953 91 43 11 chr20 3073155 3073431 -63594574 - AluSg SINE Alu 0 310 26 189 0 0 0 chr20 3073476 3073497 -63594508 + (TTTTG)n Simple_repeat Simple_repeat 4 24 0 1924 121 17 3 chr20 3073542 3073832 -63594173 - AluSx SINE Alu -18 294 1 1685 166 0 20 chr20 3073947 3074073 -63593932 + AluJb SINE Alu 12 139 -173 2164 125 0 6 chr20 3074073 3074386 -63593619 + AluSx SINE Alu 1 311 -1 1685 166 0 20 chr20 3074386 3074554 -63593451 + AluJb SINE Alu 139 300 -12 262 320 0 0 chr20 3074652 3074749 -63593256 + L1 LINE L1 3609 3705 -2441 1913 150 3 7 chr20 3074971 3075278 -63592727 + AluSx SINE Alu 1 306 -6 253 258 0 0 chr20 3075288 3075350 -63592655 - L1MC/D LINE L1 -2254 5531 5470 2335 190 48 7 chr20 3075350 3075813 -63592192 - LTR53 LTR ERVL 0 519 38 1786 151 3 22 chr20 3075823 3076141 -63591864 - AluSq SINE Alu -1 312 1 560 301 74 45 chr20 3076154 3076490 -63591515 + L1MC4a LINE L1 5539 5884 -1924 23 33 0 0 chr20 3076530 3076560 -63591445 + AT_rich Low_complexity Low_complexity 1 30 0 2160 113 0 19 chr20 3076591 3076902 -63591103 - AluSx SINE Alu -7 305 1 1182 157 52 30 chr20 3077054 3077284 -63590721 - AluJo SINE Alu -69 243 9 35 0 0 0 chr20 3077385 3077420 -63590585 + AT_rich Low_complexity Low_complexity 1 35 0 1856 192 57 65 chr20 3077441 3077946 -63590059 + MLT1D LTR MaLR 5 505 0 2156 94 11 0 chr20 3078044 3078330 -63589675 + AluSx SINE Alu 1 289 -23 606 28 0 0 chr20 3078331 3078403 -63589602 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 21 36 0 0 chr20 3078403 3078431 -63589574 + AT_rich Low_complexity Low_complexity 1 28 0 2233 102 3 0 chr20 3078860 3079163 -63588842 - AluSx SINE Alu -8 304 1 2172 97 0 34 chr20 3079218 3079566 -63588439 + AluSx SINE Alu 1 312 0 1939 123 10 10 chr20 3079854 3080146 -63587859 - AluJb SINE Alu -17 295 4 1242 118 14 59 chr20 3080158 3080195 -63587810 + AluSg/x SINE Alu 98 135 -177 2138 110 0 7 chr20 3080195 3080494 -63587511 + AluSp SINE Alu 1 297 -16 1242 118 14 59 chr20 3080494 3080677 -63587328 + AluSg/x SINE Alu 135 308 -4 485 304 149 0 chr20 3081282 3081496 -63586509 - MER112 DNA MER1_type -9 251 6 2419 50 0 3 chr20 3082003 3082300 -63585705 + AluY SINE Alu 1 296 -15 1719 151 7 43 chr20 3082472 3082777 -63585228 + AluJo SINE Alu 1 294 -18 1799 162 3 3 chr20 3083000 3083296 -63584709 + AluJb SINE Alu 1 296 -16 2337 89 0 6 chr20 3083296 3083609 -63584396 + AluY SINE Alu 1 311 0 304 114 0 0 chr20 3083944 3083988 -63584017 + Alu SINE Alu 1 44 -256 1543 76 22 31 chr20 3083988 3084211 -63583794 + AluSg/x SINE Alu 90 310 0 2245 88 7 3 chr20 3084259 3084566 -63583439 + AluSg SINE Alu 1 308 -2 2396 61 0 0 chr20 3084568 3084900 -63583105 + AluY SINE Alu 1 311 0 1938 134 0 3 chr20 3085030 3085320 -63582685 + AluSx SINE Alu 1 289 -23 1944 123 14 0 chr20 3085352 3085645 -63582360 + AluSx SINE Alu 1 297 -15 2103 81 42 0 chr20 3085732 3086016 -63581989 + AluSx SINE Alu 1 296 -16 533 186 143 56 chr20 3086475 3086636 -63581369 - MER5B DNA MER1_type -3 175 1 255 31 0 0 chr20 3089251 3089283 -63578722 + (CA)n Simple_repeat Simple_repeat 2 33 0 321 283 83 0 chr20 3089557 3089677 -63578328 - L2 LINE L2 -21 3251 3122 482 188 0 0 chr20 3090349 3090429 -63577576 + FRAM/FAM SINE Alu 1 73 -103 2267 97 0 0 chr20 3090649 3090947 -63577058 - AluSx SINE Alu -12 300 3 210 280 236 43 chr20 3092902 3093559 -63574446 + L2 LINE L2 1706 2489 -825 2408 50 0 13 chr20 3093674 3093976 -63574029 + AluY SINE Alu 1 298 -13 1860 174 144 104 chr20 3093984 3094219 -63573786 + L1MC3 LINE L1 6784 7008 -777 2369 88 0 0 chr20 3094219 3094527 -63573478 + AluSx SINE Alu 1 308 -4 1860 174 144 104 chr20 3094527 3094604 -63573401 + L1MC3 LINE L1 7008 7081 -704 246 241 0 0 chr20 3094604 3094658 -63573347 + MLT1F1 LTR MaLR 62 115 -452 1860 174 144 104 chr20 3094658 3094926 -63573079 + L1MC3 LINE L1 7081 7447 -338 1949 134 27 0 chr20 3094926 3095218 -63572787 + AluSx SINE Alu 1 300 -12 1860 174 144 104 chr20 3095218 3095242 -63572763 + L1MC3 LINE L1 7447 7469 -316 887 119 119 25 chr20 3095245 3095404 -63572601 + FRAM SINE Alu 1 171 -5 2139 102 7 0 chr20 3095404 3095698 -63572307 + AluSc SINE Alu 1 296 -13 2329 96 3 0 chr20 3095698 3096009 -63571996 + AluSp SINE Alu 1 313 0 863 202 37 49 chr20 3096010 3096138 -63571867 + L1MC3 LINE L1 6144 6272 -1513 1624 178 0 41 chr20 3096138 3096453 -63571552 + AluJb SINE Alu 1 302 -10 863 202 37 49 chr20 3096453 3096576 -63571429 + L1MC3 LINE L1 6272 7703 -82 188 214 71 102 chr20 3096904 3097002 -63571003 + L2 LINE L2 2763 2857 -457 263 228 89 40 chr20 3097005 3097106 -63570899 + LTR16A1 LTR ERVL 332 437 -20 2325 65 0 19 chr20 3097974 3098107 -63569898 + AluY SINE Alu 1 135 -176 2209 114 0 0 chr20 3098107 3098413 -63569592 + AluY SINE Alu 1 306 -5 2325 65 0 19 chr20 3098413 3098588 -63569417 + AluY SINE Alu 135 303 -8 1002 112 0 106 chr20 3098588 3098776 -63569229 + AluY SINE Alu 133 300 -11 2291 77 0 16 chr20 3098928 3099240 -63568765 - AluY SINE Alu -4 307 1 2053 74 88 0 chr20 3099249 3099532 -63568473 - AluY SINE Alu -3 308 1 2322 45 14 3 chr20 3102139 3102426 -63565579 - AluSg SINE Alu -18 292 3 207 0 0 0 chr20 3102595 3102618 -63565387 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 186 43 0 0 chr20 3102622 3102645 -63565360 + (GGGGA)n Simple_repeat Simple_repeat 1 23 0 1682 158 37 3 chr20 3102707 3103005 -63565000 + AluJb SINE Alu 1 308 -4 2092 134 0 3 chr20 3103051 3103364 -63564641 + AluSx SINE Alu 1 312 0 2230 102 3 0 chr20 3103385 3103690 -63564315 + AluSx SINE Alu 1 306 -6 1856 151 0 43 chr20 3103690 3103827 -63564178 + AluSx SINE Alu 2 143 -169 2370 71 7 3 chr20 3103827 3104135 -63563870 + AluY SINE Alu 1 309 -2 1856 151 0 43 chr20 3104135 3104322 -63563683 + AluSx SINE Alu 143 312 0 1451 154 8 8 chr20 3104365 3104612 -63563393 - AluJb SINE Alu -8 304 58 2020 112 0 3 chr20 3104690 3104998 -63563007 + AluSx SINE Alu 1 307 0 2092 116 0 3 chr20 3105000 3105302 -63562703 + AluSg SINE Alu 8 308 -2 1850 127 14 14 chr20 3105657 3105948 -63562057 - AluSp SINE Alu -16 297 7 237 263 0 18 chr20 3105949 3106006 -63561999 - MER5A DNA MER1_type -6 183 128 202 315 22 43 chr20 3107357 3107449 -63560556 + MIR SINE MIR 118 207 -55 1798 154 13 19 chr20 3159301 3159613 -63508392 - AluJb SINE Alu 0 312 3 1880 138 0 40 chr20 3160075 3160400 -63507605 + AluSx SINE Alu 1 312 0 270 0 0 0 chr20 3162938 3162968 -63505037 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 405 0 0 0 chr20 3162967 3163012 -63504993 + (CA)n Simple_repeat Simple_repeat 1 45 0 1854 48 0 52 chr20 3163988 3164239 -63503766 + AluY SINE Alu 37 274 -37 315 0 0 0 chr20 3164239 3164274 -63503731 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 295 109 16 62 chr20 3166493 3166557 -63501448 - MER45 DNA AcHobo -56 122 62 22 0 0 0 chr20 3166979 3167001 -63501004 + GC_rich Low_complexity Low_complexity 1 22 0 1808 160 0 3 chr20 3169098 3169391 -63498614 + AluJb SINE Alu 1 292 -20 338 243 141 40 chr20 3169394 3169420 -63498585 + L2 LINE L2 1689 1711 -1603 2116 92 0 23 chr20 3169420 3169725 -63498280 + AluSc SINE Alu 1 298 -11 338 243 141 40 chr20 3169725 3169875 -63498130 + L2 LINE L2 1711 1883 -1431 771 150 0 30 chr20 3169929 3170062 -63497943 + FLAM_A SINE Alu 2 130 -3 1226 167 36 113 chr20 3170261 3170596 -63497409 - AluJb SINE Alu -3 309 1 1914 80 8 0 chr20 3170598 3170849 -63497156 - AluY SINE Alu -8 303 51 349 103 35 0 chr20 3170849 3170907 -63497098 - AluSq/x SINE Alu -158 145 86 1238 156 5 22 chr20 3170907 3171131 -63496874 - AluJo SINE Alu -92 220 1 863 237 16 5 chr20 3171134 3171324 -63496681 - AluJb SINE Alu 0 312 121 1275 172 0 29 chr20 3171734 3171978 -63496027 - AluJo SINE Alu -17 295 59 25 0 0 0 chr20 3173230 3173255 -63494750 + AT_rich Low_complexity Low_complexity 1 25 0 2325 94 0 0 chr20 3173634 3173942 -63494063 - AluSg SINE Alu -1 309 2 2329 87 0 3 chr20 3173943 3174252 -63493753 - AluSx SINE Alu -4 308 1 1449 170 62 4 chr20 3174386 3174662 -63493343 + AluJb SINE Alu 1 292 -20 1094 152 6 6 chr20 3174668 3174846 -63493159 + FRAM SINE Alu 1 175 -1 1862 139 6 29 chr20 3174846 3175162 -63492843 + AluSx SINE Alu 1 309 -3 349 233 121 17 chr20 3175280 3175396 -63492609 + MLT1K LTR MaLR 156 283 -305 22 0 0 0 chr20 3177048 3177070 -63490935 + AT_rich Low_complexity Low_complexity 1 22 0 790 153 0 0 chr20 3180699 3180817 -63487188 + AluJo/FLAM SINE Alu 1 118 -184 2215 98 3 13 chr20 3180817 3181133 -63486872 + AluSp SINE Alu 1 313 0 2288 107 0 0 chr20 3181728 3182036 -63485969 - AluSx SINE Alu -4 308 1 488 286 8 8 chr20 3182039 3182172 -63485833 + LTR16C LTR ERVL 346 478 -13 920 155 0 0 chr20 3184026 3184168 -63483837 + FRAM SINE Alu 4 145 -31 217 317 72 56 chr20 3184211 3184391 -63483614 - L2 LINE L2 -831 2483 2301 573 211 49 49 chr20 3184543 3184685 -63483320 + FLAM_A SINE Alu 1 142 0 1829 167 3 3 chr20 3184887 3185198 -63482807 + AluJb SINE Alu 1 311 -1 2177 98 0 16 chr20 3185200 3185368 -63482637 - AluSx SINE Alu -11 301 139 1983 104 3 79 chr20 3185368 3185686 -63482319 - AluSq SINE Alu -19 294 1 2177 98 0 16 chr20 3185686 3185823 -63482182 - AluSx SINE Alu -173 139 1 291 366 14 7 chr20 3186253 3186395 -63481610 + MLT1L LTR MaLR 341 483 -132 327 337 64 32 chr20 3186480 3186667 -63481338 + L2 LINE L2 2849 3041 -231 2650 13 0 0 chr20 3187715 3188014 -63479991 + AluYb8 SINE Alu 1 299 -19 1988 142 0 7 chr20 3188286 3188589 -63479416 - AluSx SINE Alu -11 301 1 1634 172 21 3 chr20 3188709 3188994 -63479011 - AluJb SINE Alu -22 290 1 2237 98 3 0 chr20 3188996 3189007 -63478998 - AluSg SINE Alu -3 307 298 198 0 0 0 chr20 3189007 3189029 -63478976 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 2237 98 3 0 chr20 3189029 3189323 -63478682 - AluSg SINE Alu -12 298 1 2279 89 7 0 chr20 3189903 3190206 -63477799 - AluSq SINE Alu -8 305 1 2446 81 0 0 chr20 3190621 3190931 -63477074 - AluY SINE Alu -1 310 1 520 279 75 10 chr20 3191130 3191331 -63476674 + MIR SINE MIR 3 216 -46 934 191 36 21 chr20 3191331 3191525 -63476480 + MER3 DNA MER1_type 1 197 -12 2238 101 0 0 chr20 3192227 3192525 -63475480 - AluSc SINE Alu -11 298 1 500 251 21 37 chr20 3192543 3192730 -63475275 - L1MC4 LINE L1 -94 7948 7765 413 188 180 23 chr20 3192737 3192865 -63475140 + MER5A DNA MER1_type 39 186 -3 2322 76 0 31 chr20 3192940 3193257 -63474748 + AluSx SINE Alu 1 307 -5 2279 97 0 7 chr20 3193328 3193637 -63474368 - AluSq SINE Alu -6 307 1 2584 240 48 56 chr20 3193648 3194123 -63473882 - L1MC4 LINE L1 -262 7627 7149 2254 77 0 22 chr20 3194123 3194434 -63473571 - AluY SINE Alu -7 304 1 2584 240 48 56 chr20 3194434 3194513 -63473492 - L1MC4 LINE L1 -740 7149 7071 2225 101 3 0 chr20 3194513 3194809 -63473196 - AluSp SINE Alu -16 297 1 2584 240 48 56 chr20 3194809 3195246 -63472759 - L1MC4 LINE L1 -818 7071 6555 1752 141 0 0 chr20 3195246 3195508 -63472497 + AluSx SINE Alu 37 298 -14 2584 240 48 56 chr20 3195508 3195573 -63472432 - L1MC4 LINE L1 -1334 6555 6491 354 233 133 52 chr20 3195584 3195675 -63472330 - L1MC4a LINE L1 -1476 6332 6250 2218 98 0 19 chr20 3195675 3195992 -63472013 - AluSq SINE Alu -2 311 1 2114 110 3 0 chr20 3195994 3196284 -63471721 - AluSg SINE Alu -19 291 1 354 233 133 52 chr20 3196284 3196399 -63471606 - L1MC4a LINE L1 -1558 6250 6106 2072 97 13 26 chr20 3196555 3196864 -63471141 - AluY SINE Alu -6 305 1 1313 178 55 31 chr20 3196866 3197158 -63470847 - AluJo SINE Alu -13 299 1 2439 40 0 13 chr20 3197330 3197629 -63470376 + AluY SINE Alu 1 295 -16 788 167 24 0 chr20 3197665 3197791 -63470214 - FLAM_C SINE Alu -4 129 1 1081 129 0 29 chr20 3197794 3197964 -63470041 - FRAM SINE Alu -1 165 1 2254 103 0 0 chr20 3198468 3198770 -63469235 - AluSx SINE Alu -10 302 1 2168 110 10 0 chr20 3199266 3199576 -63468429 - AluSp SINE Alu 0 313 1 732 221 136 34 chr20 3199580 3199933 -63468072 - L1MC5 LINE L1 -36 7925 7537 1455 132 0 17 chr20 3199951 3200186 -63467819 - AluJb SINE Alu -81 231 1 307 366 40 0 chr20 3200202 3200303 -63467702 - HAL1 LINE L1 -146 2361 2257 350 201 132 14 chr20 3200311 3200455 -63467550 - HAL1b LINE L1 -509 839 679 2123 98 3 29 chr20 3200471 3200786 -63467219 - AluSp SINE Alu -4 309 3 2539 151 34 14 chr20 3201001 3201419 -63466586 - MSTB LTR MaLR 0 426 1 2119 129 0 0 chr20 3201791 3202100 -63465905 - AluSx SINE Alu -3 309 1 372 318 13 33 chr20 3202140 3202291 -63465714 + MIR SINE MIR 7 154 -108 287 328 195 20 chr20 3204573 3204978 -63463027 + L2 LINE L2 1525 2000 -1314 431 321 53 50 chr20 3205040 3205342 -63462663 + L2 LINE L2 2244 2546 -768 2214 108 0 0 chr20 3206096 3206391 -63461614 + AluSg SINE Alu 1 295 -15 252 351 77 50 chr20 3207267 3207489 -63460516 - MIR SINE MIR -4 258 31 400 228 61 61 chr20 3207609 3207723 -63460282 - MARNA DNA Mariner -207 379 266 2109 96 0 7 chr20 3207958 3208240 -63459765 + AluSp SINE Alu 21 300 -13 1616 161 18 7 chr20 3208286 3208572 -63459433 - AluJo SINE Alu -23 289 1 257 204 32 32 chr20 3208582 3208675 -63459330 - HAL1b LINE L1 -575 773 681 2106 108 0 14 chr20 3208690 3208986 -63459019 - AluSx SINE Alu -20 292 1 189 234 21 0 chr20 3209880 3209927 -63458078 + L2 LINE L2 2233 2280 -1034 1530 277 66 13 chr20 3210012 3210669 -63457336 + L2 LINE L2 2521 3202 -111 2013 122 0 3 chr20 3211831 3212127 -63455878 - AluJb SINE Alu -5 307 13 1121 187 101 8 chr20 3212457 3212517 -63455488 - L1MD2 LINE L1 -177 6182 6129 222 37 0 0 chr20 3212517 3212544 -63455461 + (TG)n Simple_repeat Simple_repeat 2 28 0 1121 187 101 8 chr20 3212544 3212755 -63455250 - L1MD2 LINE L1 -230 6129 5919 811 145 8 0 chr20 3212923 3213047 -63454958 + FLAM_C SINE Alu 2 126 -7 2262 94 0 0 chr20 3213056 3213353 -63454652 + AluSx SINE Alu 3 299 -13 2214 115 0 3 chr20 3213354 3213667 -63454338 + AluSx SINE Alu 1 312 0 2176 94 3 3 chr20 3215825 3216123 -63451882 + AluSp SINE Alu 1 298 -15 474 269 117 0 chr20 3216569 3216714 -63451291 + L2 LINE L2 2911 3072 -241 1225 235 7 7 chr20 3216729 3216854 -63451151 + AluJo SINE Alu 7 131 -181 723 82 0 0 chr20 3216854 3216952 -63451053 + L1PA4 LINE L1 6054 6151 -4 1225 235 7 7 chr20 3216952 3217120 -63450885 + AluJo SINE Alu 130 300 -12 1747 161 26 0 chr20 3217165 3217469 -63450536 - AluJb SINE Alu 0 312 1 645 259 78 21 chr20 3217473 3217666 -63450339 + L2 LINE L2 3107 3310 -3 475 249 259 25 chr20 3217930 3218131 -63449874 + MIR SINE MIR 13 260 -2 2316 90 0 0 chr20 3218445 3218746 -63449259 - AluSx SINE Alu -11 301 1 2391 66 3 3 chr20 3218995 3219299 -63448706 - AluSc SINE Alu -5 304 1 2114 105 0 3 chr20 3219660 3219955 -63448050 - AluSx SINE Alu -16 296 3 2151 106 3 0 chr20 3220142 3220443 -63447562 + AluSx SINE Alu 1 302 -10 1795 117 19 62 chr20 3220443 3220749 -63447256 + AluSx SINE Alu 1 294 -18 1718 74 0 4 chr20 3220748 3220977 -63447028 + AluSg/x SINE Alu 80 307 -3 * 2124 87 49 0 chr20 3221060 3221348 -63446657 + AluSx SINE Alu 1 302 -10 2378 54 0 14 chr20 3222531 3222826 -63445179 - AluY SINE Alu -20 291 1 2081 102 3 23 chr20 3222831 3223136 -63444869 - AluSx SINE Alu -13 299 1 564 189 90 0 chr20 3223811 3223922 -63444083 + AluJb SINE Alu 158 278 -34 1654 188 3 13 chr20 3224035 3224338 -63443667 - AluJo SINE Alu -12 300 1 1500 143 91 8 chr20 3226007 3226272 -63441733 - AluJo SINE Alu -20 292 6 3130 220 27 48 chr20 3226325 3226565 -63441440 - L1M4 LINE L1 -884 5262 5018 2036 101 0 0 chr20 3226565 3226841 -63441164 - AluSg SINE Alu -11 299 24 3130 220 27 48 chr20 3226841 3226962 -63441043 - L1M4 LINE L1 -1128 5018 4896 1830 124 10 26 chr20 3226962 3227269 -63440736 - AluSq SINE Alu -11 302 1 3130 220 27 48 chr20 3227269 3227559 -63440446 - L1M4 LINE L1 -1250 4896 4632 1862 159 0 7 chr20 3227559 3227860 -63440145 - AluSx SINE Alu -12 300 2 3130 220 27 48 chr20 3227860 3228109 -63439896 - L1M4 LINE L1 -1514 4632 4379 837 189 6 18 chr20 3228109 3228278 -63439727 - AluJb SINE Alu -15 297 131 317 54 0 0 chr20 3228298 3228387 -63439618 + Alu SINE Alu 244 332 0 716 133 88 0 chr20 3228387 3228500 -63439505 - AluJb SINE Alu -188 124 2 345 179 0 0 chr20 3228502 3228569 -63439436 - L1M4 LINE L1 -1763 4383 4317 970 193 0 0 chr20 3228665 3228836 -63439169 - AluJo/FRAM SINE Alu -5 307 137 2251 107 0 0 chr20 3228836 3229145 -63438860 - AluSq SINE Alu -4 309 1 186 43 0 0 chr20 3229594 3229617 -63438388 + (TA)n Simple_repeat Simple_repeat 2 24 0 1863 129 21 0 chr20 3229617 3229896 -63438109 - AluSx SINE Alu -27 285 1 1359 152 104 11 chr20 3229908 3230177 -63437828 - L1MA6 LINE L1 0 6300 6007 1050 205 40 29 chr20 3230219 3230497 -63437508 + L1ME1 LINE L1 5768 6048 -118 2317 73 0 13 chr20 3230614 3230915 -63437090 + AluY SINE Alu 1 297 -14 31 68 0 0 chr20 3231001 3231060 -63436945 + AT_rich Low_complexity Low_complexity 1 59 0 372 304 67 41 chr20 3234088 3234282 -63433723 - MIR SINE MIR -33 229 31 198 0 0 0 chr20 3235625 3235647 -63432358 + (A)n Simple_repeat Simple_repeat 1 22 0 412 228 41 41 chr20 3235842 3235987 -63432018 - L1ME3A LINE L1 -219 5951 5807 2224 96 0 3 chr20 3236000 3236302 -63431703 - AluSx SINE Alu -11 301 1 937 156 0 12 chr20 3236353 3236513 -63431492 + AluSx SINE Alu 1 158 -154 788 180 49 22 chr20 3236536 3236719 -63431286 - MLT1A2 LTR MaLR -179 195 8 277 269 65 87 chr20 3236727 3237002 -63431003 - L1ME3A LINE L1 -1419 4727 4459 537 152 22 0 chr20 3237002 3237094 -63430911 + MLT1A2 LTR MaLR 281 374 0 711 274 151 12 chr20 3237148 3237571 -63430434 + L1ME3A LINE L1 4801 5282 -864 1961 123 17 0 chr20 3237571 3237864 -63430141 + AluSp SINE Alu 1 298 -15 884 99 12 25 chr20 3237888 3238050 -63429955 + (GAAA)n Simple_repeat Simple_repeat 4 163 0 2209 104 0 0 chr20 3238061 3238359 -63429646 + AluSx SINE Alu 1 298 -14 937 245 95 89 chr20 3238361 3238806 -63429199 + L1ME3A LINE L1 5280 5721 -449 1512 144 59 0 chr20 3238806 3239062 -63428943 - AluJo SINE Alu -19 293 23 937 245 95 89 chr20 3239062 3239082 -63428923 + L1ME3A LINE L1 5721 5739 -431 743 191 0 8 chr20 3239082 3239208 -63428797 - FLAM_A SINE Alu -8 125 1 937 245 95 89 chr20 3239208 3239395 -63428610 + L1ME3A LINE L1 5739 5937 -233 2294 88 7 0 chr20 3239638 3239946 -63428059 - AluSp SINE Alu -3 310 1 495 188 91 91 chr20 3240256 3240432 -63427573 + MER69A DNA AcHobo 2 177 0 521 234 0 9 chr20 3241267 3241378 -63426627 + MLT1-int LTR MaLR 772 881 -490 736 216 102 131 chr20 3241464 3241974 -63426031 + MLT1-int LTR MaLR 877 1371 0 1594 217 73 18 chr20 3242003 3242385 -63425620 + MLT1E2 LTR MaLR 215 617 -9 323 239 35 20 chr20 3243991 3244124 -63423881 + MIR SINE MIR 23 146 -62 1933 139 0 0 chr20 3244546 3244833 -63423172 - AluSx SINE Alu -5 307 21 1345 139 9 5 chr20 3244833 3245040 -63422965 + AluJb SINE Alu 93 303 -9 333 229 24 109 chr20 3245199 3245265 -63422740 - L1MC/D LINE L1 -795 5351 5450 2231 97 0 0 chr20 3245265 3245555 -63422450 - AluSx SINE Alu -22 290 1 333 229 24 109 chr20 3245555 3245745 -63422260 - L1MC/D LINE L1 -695 5451 5246 413 152 0 13 chr20 3245757 3245836 -63422169 - AluJ/FRAM SINE Alu -8 304 227 1650 144 62 17 chr20 3246340 3246453 -63421552 + AluJo SINE Alu 6 112 -200 2219 114 0 13 chr20 3246453 3246769 -63421236 + AluSx SINE Alu 1 312 0 1650 144 62 17 chr20 3246769 3246946 -63421059 + AluJo SINE Alu 112 309 -3 205 373 91 18 chr20 3247734 3247844 -63420161 - L2 LINE L2 -16 3256 3139 2158 153 18 0 chr20 3248858 3249199 -63418806 - MER7A DNA MER2_type -1 345 1 1185 164 17 30 chr20 3249223 3249454 -63418551 - AluJo SINE Alu -10 302 75 2145 124 3 0 chr20 3250931 3251237 -63416768 - AluSx SINE Alu -5 307 1 186 305 73 0 chr20 3251538 3251620 -63416385 - MIR SINE MIR -128 134 47 1687 158 0 51 chr20 3254106 3254422 -63413583 + AluJb SINE Alu 1 300 -12 925 118 71 164 chr20 3254841 3255079 -63412926 - MER20 DNA MER1_type -3 216 1 366 343 87 17 chr20 3255261 3255433 -63412572 - MIR3 SINE MIR -16 192 9 2075 109 0 23 chr20 3255840 3256143 -63411862 - AluSg SINE Alu -14 296 1 263 135 19 0 chr20 3256482 3256520 -63411485 + (CA)n Simple_repeat Simple_repeat 2 43 -11 2231 109 0 0 chr20 3256520 3256824 -63411181 - AluSx SINE Alu -6 306 3 263 135 19 0 chr20 3256824 3256837 -63411168 + (CA)n Simple_repeat Simple_repeat 43 54 0 1505 163 43 4 chr20 3256837 3257113 -63410892 - AluJb SINE Alu -25 287 1 299 323 31 10 chr20 3257242 3257338 -63410667 - MER5A DNA MER1_type -52 137 40 1576 166 34 7 chr20 3257901 3258196 -63409809 - AluJo SINE Alu -8 304 2 2236 97 3 0 chr20 3258448 3258747 -63409258 - AluSx SINE Alu -12 300 1 22 0 0 0 chr20 3258915 3258937 -63409068 + AT_rich Low_complexity Low_complexity 1 22 0 2102 140 0 0 chr20 3259330 3259630 -63408375 - AluSx SINE Alu -12 300 1 1988 145 0 32 chr20 3260110 3260420 -63407585 - AluSx SINE Alu -12 300 1 512 100 12 0 chr20 3260514 3260594 -63407411 + (TG)n Simple_repeat Simple_repeat 1 81 0 404 291 66 38 chr20 3261789 3262002 -63406003 + L2 LINE L2 2181 2399 -915 2322 143 117 29 chr20 3262002 3262448 -63405557 - L1MC1 LINE L1 -434 5899 5415 238 303 192 0 chr20 3262565 3262664 -63405341 + L2 LINE L2 3155 3272 0 4017 173 43 59 chr20 3262836 3263131 -63404874 - L1MDa LINE L1 -4471 2069 1771 2490 82 0 0 chr20 3263131 3263435 -63404570 + AluSq SINE Alu 1 304 -9 4017 173 43 59 chr20 3263435 3263497 -63404508 - L1MDa LINE L1 -4769 1771 1710 2176 130 0 0 chr20 3263497 3263789 -63404216 + AluSx SINE Alu 1 292 -20 4017 173 43 59 chr20 3263789 3264210 -63403795 - L1MDa LINE L1 -4830 1710 1284 2025 111 31 7 chr20 3264210 3264499 -63403506 - AluSq SINE Alu -17 296 1 4017 173 43 59 chr20 3264499 3264527 -63403478 - L1MDa LINE L1 -5256 1284 1257 2479 78 3 0 chr20 3264527 3264835 -63403170 - AluY SINE Alu -2 309 1 4017 173 43 59 chr20 3264835 3264925 -63403080 - L1MDa LINE L1 -5283 1257 1167 1526 111 0 75 chr20 3264925 3265178 -63402827 - AluY SINE Alu -17 294 61 4017 173 43 59 chr20 3265178 3265318 -63402687 - L1MDa LINE L1 -5373 1167 1045 * 4032 204 72 45 chr20 3265314 3266305 -63401700 - L1MCb LINE L1 -4196 2368 1307 2451 82 0 3 chr20 3266305 3266610 -63401395 - AluSq SINE Alu -9 304 1 4032 204 72 45 chr20 3266610 3267408 -63400597 - L1MCb LINE L1 -5257 1307 532 1056 161 0 0 chr20 3267410 3267572 -63400433 + AluJb SINE Alu 147 308 -4 360 218 69 90 chr20 3268819 3269007 -63398998 + L2 LINE L2 1812 1995 -1319 607 317 156 27 chr20 3269137 3269445 -63398560 + L2 LINE L2 2362 2629 -685 2186 44 0 0 chr20 3269445 3269694 -63398311 - AluY SINE Alu -23 288 40 607 317 156 27 chr20 3269694 3269905 -63398100 + L2 LINE L2 2629 2948 -366 235 292 82 62 chr20 3269982 3270177 -63397828 + L2 LINE L2 3105 3303 -10 512 243 21 0 chr20 3270622 3270762 -63397243 - L1 LINE L1 -898 5248 5106 2153 95 57 0 chr20 3270820 3271103 -63396902 - AluSp SINE Alu -14 299 1 22 0 0 0 chr20 3271131 3271153 -63396852 + AT_rich Low_complexity Low_complexity 1 22 0 303 93 0 0 chr20 3271497 3271540 -63396465 + (TG)n Simple_repeat Simple_repeat 1 43 0 214 261 0 0 chr20 3271641 3271706 -63396299 + A-rich Low_complexity Low_complexity 1 65 0 627 270 176 32 chr20 3272028 3272237 -63395768 - L1ME4a LINE L1 0 6121 5943 519 17 0 0 chr20 3272237 3272297 -63395708 + (CA)n Simple_repeat Simple_repeat 2 61 0 627 270 176 32 chr20 3272297 3272651 -63395354 - L1ME4a LINE L1 -178 5943 5330 1722 139 4 4 chr20 3272674 3272926 -63395079 - AluSq SINE Alu -12 301 50 561 271 101 0 chr20 3272982 3273181 -63394824 - MIR SINE MIR -1 261 43 261 294 134 35 chr20 3273191 3273504 -63394501 + L1MC4a LINE L1 4943 5286 -860 715 46 0 0 chr20 3273512 3273599 -63394406 + AluSc SINE Alu 202 288 -21 2451 225 73 53 chr20 3273657 3274479 -63393526 + L1MC4a LINE L1 5310 6147 -1661 1389 250 21 114 chr20 3274484 3275147 -63392858 + L1M4 LINE L1 1451 2174 -4651 319 77 0 0 chr20 3275147 3275186 -63392819 - U2 snRNA snRNA -149 39 1 1389 250 21 114 chr20 3275186 3275302 -63392703 + L1M4 LINE L1 2174 2343 -4482 2094 100 21 0 chr20 3275302 3275581 -63392424 + AluSx SINE Alu 1 285 -27 1389 250 21 114 chr20 3275581 3275601 -63392404 + L1M4 LINE L1 2343 2363 -4462 33 25 0 0 chr20 3276103 3276143 -63391862 + AT_rich Low_complexity Low_complexity 1 40 0 1236 199 151 19 chr20 3276412 3276724 -63391281 + L1MB8 LINE L1 5825 6177 -1 1493 165 0 89 chr20 3276728 3277043 -63390962 + AluJb SINE Alu 1 287 -25 182 204 136 0 chr20 3277565 3277609 -63390396 + L2 LINE L2 3212 3261 -11 471 60 0 0 chr20 3277781 3277848 -63390157 + (CA)n Simple_repeat Simple_repeat 2 68 0 907 113 8 0 chr20 3277854 3277978 -63390027 + AluJb SINE Alu 1 125 -187 1200 218 5 101 chr20 3278157 3278543 -63389462 + L1MC5 LINE L1 6615 6963 -998 209 135 27 0 chr20 3278543 3278580 -63389425 + (TA)n Simple_repeat Simple_repeat 1 38 0 871 219 36 86 chr20 3278623 3278867 -63389138 + L1MC5 LINE L1 7185 7407 -554 1849 142 35 3 chr20 3278867 3279156 -63388849 + AluSq SINE Alu 1 298 -15 871 219 36 86 chr20 3279156 3279272 -63388733 + L1MC5 LINE L1 7407 7527 -434 264 224 0 0 chr20 3279491 3279571 -63388434 - AluJ/monomer SINE Alu 0 314 235 1091 104 0 14 chr20 3279571 3279715 -63388290 - AluSq/x SINE Alu -171 142 1 488 265 100 9 chr20 3280206 3280384 -63387621 + MIR SINE MIR 40 230 -32 282 119 0 85 chr20 3280442 3280501 -63387504 + L1MC5 LINE L1 6907 6960 -1001 266 132 19 0 chr20 3280503 3280556 -63387449 + (TA)n Simple_repeat Simple_repeat 1 54 0 219 314 118 0 chr20 3280591 3280693 -63387312 - MIR SINE MIR -56 206 93 365 160 56 0 chr20 3280696 3280821 -63387184 + (TA)n Simple_repeat Simple_repeat 2 133 0 1388 172 76 8 chr20 3281020 3281282 -63386723 + AluJb SINE Alu 1 280 -32 263 322 35 0 chr20 3281746 3281833 -63386172 - MIR SINE MIR -114 148 59 2141 125 10 0 chr20 3282949 3283245 -63384760 + AluSx SINE Alu 1 299 -13 469 286 71 36 chr20 3283255 3283535 -63384470 - L1M4 LINE L1 -2201 3945 3656 2106 101 25 0 chr20 3283684 3283960 -63384045 - AluSx SINE Alu -15 297 15 2117 103 3 3 chr20 3284846 3285153 -63382852 + AluSx SINE Alu 1 307 0 200 148 0 66 chr20 3285287 3285348 -63382657 + (TTTTTA)n Simple_repeat Simple_repeat 2 58 0 604 129 0 69 chr20 3285352 3285453 -63382552 - AluSp/q SINE Alu -17 296 203 1354 157 14 5 chr20 3285453 3285669 -63382336 + AluJo SINE Alu 71 288 -24 29 0 0 0 chr20 3285669 3285698 -63382307 + AT_rich Low_complexity Low_complexity 1 29 0 373 241 88 122 chr20 3285698 3285945 -63382060 - HAL1b LINE L1 -840 508 271 2095 128 0 7 chr20 3285945 3286242 -63381763 - AluSx SINE Alu -17 295 1 373 241 88 122 chr20 3286242 3286289 -63381716 - HAL1b LINE L1 -1077 271 224 611 261 13 7 chr20 3286333 3286486 -63381519 + L1MC4 LINE L1 6701 6854 -1188 839 216 28 0 chr20 3286613 3286789 -63381216 + MER58A DNA MER1_type 42 222 -2 323 254 8 75 chr20 3287556 3287690 -63380315 - HAL1 LINE L1 -4 2503 2379 855 94 0 0 chr20 3287692 3287798 -63380207 + U6 snRNA snRNA 1 106 -1 21 0 0 0 chr20 3287799 3287820 -63380185 + AT_rich Low_complexity Low_complexity 1 21 0 441 248 99 0 chr20 3287820 3287981 -63380024 - HAL1 LINE L1 -115 2392 2216 534 193 0 0 chr20 3287989 3288072 -63379933 - AluJ/FLAM SINE Alu -228 84 2 317 299 84 26 chr20 3290009 3290163 -63377842 - HAL1 LINE L1 -345 2162 2000 740 172 147 73 chr20 3290205 3290409 -63377596 - MER20 DNA MER1_type 0 219 1 333 218 142 81 chr20 3290452 3290603 -63377402 - HAL1 LINE L1 -674 1833 1693 2328 103 0 0 chr20 3290603 3290905 -63377100 + AluSx SINE Alu 1 302 -10 333 218 142 81 chr20 3290905 3290926 -63377079 - HAL1 LINE L1 -814 1693 1675 216 0 0 0 chr20 3290926 3290950 -63377055 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 333 218 142 81 chr20 3290950 3290973 -63377032 - HAL1 LINE L1 -832 1675 1625 1232 126 0 0 chr20 3290974 3291148 -63376857 + AluSg/x SINE Alu 137 310 -2 21 36 0 0 chr20 3291188 3291216 -63376789 + AT_rich Low_complexity Low_complexity 1 28 0 980 109 13 26 chr20 3291227 3291383 -63376622 + BC200 scRNA scRNA 1 154 -46 3321 219 65 70 chr20 3291412 3291627 -63376378 - L1MEc LINE L1 -5217 1179 964 863 154 0 8 chr20 3291627 3291757 -63376248 - FLAM_A SINE Alu -4 129 1 3321 219 65 70 chr20 3291757 3292187 -63375818 - L1MEc LINE L1 -5432 964 533 15521 120 25 53 chr20 3292187 3292588 -63375417 - Tigger1 DNA MER2_type 0 2418 2007 1492 166 18 109 chr20 3292588 3292926 -63375079 - AluJo SINE Alu 0 312 6 15521 120 25 53 chr20 3292926 3293030 -63374975 - Tigger1 DNA MER2_type -411 2007 1902 315 0 0 0 chr20 3293030 3293065 -63374940 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2270 87 0 0 chr20 3293071 3293348 -63374657 - AluSx SINE Alu -35 277 1 15521 120 25 53 chr20 3293348 3294299 -63373706 - Tigger1 DNA MER2_type -521 1897 1050 2070 136 0 13 chr20 3294299 3294615 -63373390 + AluJb SINE Alu 1 312 0 15521 120 25 53 chr20 3294615 3295637 -63372368 - Tigger1 DNA MER2_type -1368 1050 1 3321 219 65 70 chr20 3295637 3296029 -63371976 - L1MEc LINE L1 -5863 533 146 2425 53 3 23 chr20 3296172 3296474 -63371531 - AluY SINE Alu -15 296 1 1915 123 20 3 chr20 3296508 3296800 -63371205 + AluSq SINE Alu 1 297 -16 389 251 105 111 chr20 3296800 3297037 -63370968 - HAL1 LINE L1 -1068 1439 1202 2125 118 3 3 chr20 3297037 3297333 -63370672 - AluSx SINE Alu -16 296 1 389 251 105 111 chr20 3297333 3297744 -63370261 - HAL1 LINE L1 -1305 1202 795 1404 134 79 66 chr20 3297898 3298072 -63369933 - AluJo SINE Alu -3 309 128 2242 106 0 0 chr20 3298072 3298364 -63369641 - AluSc SINE Alu -17 292 1 1404 134 79 66 chr20 3298364 3298494 -63369511 - AluJo SINE Alu -184 128 1 2697 23 0 3 chr20 3298990 3299298 -63368707 - AluY SINE Alu -3 308 2 826 263 62 9 chr20 3300315 3300539 -63367466 + MIR SINE MIR 8 243 -19 34 42 0 0 chr20 3300553 3300601 -63367404 + AT_rich Low_complexity Low_complexity 1 48 0 200 182 0 0 chr20 3301343 3301376 -63366629 + (TGGG)n Simple_repeat Simple_repeat 3 35 0 246 243 14 14 chr20 3302959 3303029 -63364976 + L1M4 LINE L1 4959 5028 -1118 2081 116 42 0 chr20 3303234 3303519 -63364486 + AluSx SINE Alu 1 297 -15 4624 137 52 43 chr20 3304110 3304439 -63363566 - MER4D LTR ERV1 0 865 541 2417 78 0 19 chr20 3304439 3304747 -63363258 + AluSg SINE Alu 1 302 -8 4624 137 52 43 chr20 3304747 3305116 -63362889 - MER4D LTR ERV1 -324 541 194 1825 151 27 7 chr20 3305116 3305414 -63362591 - AluJb SINE Alu -8 304 1 4624 137 52 43 chr20 3305414 3305610 -63362395 - MER4D LTR ERV1 -671 194 1 1758 120 84 4 chr20 3306991 3307265 -63360740 + AluSg SINE Alu 6 301 -9 2158 113 17 0 chr20 3307435 3307736 -63360269 + AluSx SINE Alu 1 306 -6 1474 148 14 0 chr20 3308068 3308284 -63359721 - MER20 DNA MER1_type 0 219 1 333 228 73 32 chr20 3309610 3309733 -63358272 - L2 LINE L2 -41 3272 3145 420 149 138 0 chr20 3310288 3310375 -63357630 - L1M4 LINE L1 -2472 3674 3576 2070 82 78 4 chr20 3310928 3311209 -63356796 - AluSx SINE Alu -10 302 1 2108 118 17 3 chr20 3311455 3311751 -63356254 - AluSx SINE Alu -12 300 1 1068 205 24 0 chr20 3311885 3312095 -63355910 + U3 snRNA snRNA 1 215 -2 857 126 0 30 chr20 3312193 3312328 -63355677 - FLAM_A SINE Alu -1 132 2 883 218 25 21 chr20 3312344 3312583 -63355422 + L1MC/D LINE L1 3722 3961 -2185 353 194 183 0 chr20 3312587 3312680 -63355325 + L1MA4 LINE L1 6188 6297 -3 4849 215 43 28 chr20 3312682 3313081 -63354924 + L1MC/D LINE L1 3948 4340 -1902 1539 151 4 54 chr20 3313081 3313360 -63354645 - AluJo SINE Alu -19 293 29 4849 215 43 28 chr20 3313360 3313664 -63354341 + L1MC/D LINE L1 4340 4638 -1604 712 202 16 0 chr20 3313664 3313793 -63354212 + FLAM_A SINE Alu 1 131 -2 4849 215 43 28 chr20 3313793 3314664 -63353341 + L1MC/D LINE L1 4638 5548 -694 2987 214 36 0 chr20 3314647 3315363 -63352642 + L1MB2 LINE L1 4468 5209 -937 * 4158 140 39 92 chr20 3315367 3315417 -63352588 + L1MB2 LINE L1 5282 5333 -838 1732 148 6 81 chr20 3315417 3315749 -63352256 + AluJo SINE Alu 1 307 -5 4158 140 39 92 chr20 3315749 3316615 -63351390 + L1MB2 LINE L1 5333 6150 -21 1403 138 0 9 chr20 3316616 3316826 -63351179 - AluSq SINE Alu -4 309 102 1795 151 7 21 chr20 3316827 3317106 -63350899 - AluJb SINE Alu -37 275 1 815 164 0 15 chr20 3317142 3317276 -63350729 + FLAM_C SINE Alu 2 133 0 692 275 55 55 chr20 3317277 3317410 -63350595 + L1MC4 LINE L1 7552 7684 -358 2290 115 0 0 chr20 3317410 3317714 -63350291 + AluSx SINE Alu 1 304 -8 692 275 55 55 chr20 3317714 3318028 -63349977 + L1MC4 LINE L1 7684 8002 -40 2175 109 20 0 chr20 3318028 3318321 -63349684 - AluSx SINE Alu -13 299 1 692 275 55 55 chr20 3318321 3318363 -63349642 + L1MC4 LINE L1 8001 8042 0 281 247 0 21 chr20 3318973 3319070 -63348935 - L1ME4a LINE L1 -49 6072 5978 2403 93 6 0 chr20 3319224 3319535 -63348470 - AluSp SINE Alu 0 313 1 1355 173 112 29 chr20 3319566 3319844 -63348161 + AluJo SINE Alu 1 301 -11 223 303 53 61 chr20 3320078 3320210 -63347795 - MIR3 SINE MIR -73 135 5 304 250 48 32 chr20 3320650 3320774 -63347231 - L1MC4a LINE L1 -1879 5929 5804 714 130 0 0 chr20 3320823 3320950 -63347055 - AluSg/x SINE Alu 0 311 185 1423 161 32 28 chr20 3320950 3321198 -63346807 + AluJb SINE Alu 64 312 0 575 290 20 20 chr20 3321231 3321431 -63346574 - L1MC4a LINE L1 -2035 5773 5574 366 312 92 44 chr20 3321576 3321712 -63346293 - L1MC4a LINE L1 -757 5389 5261 2204 113 3 3 chr20 3321712 3322012 -63345993 + AluSq SINE Alu 1 300 -13 366 312 92 44 chr20 3322012 3322125 -63345880 - L1MC4a LINE L1 -885 5261 5128 2757 29 0 13 chr20 3322612 3322927 -63345078 - AluY SINE Alu 0 311 1 2065 145 10 0 chr20 3322932 3323236 -63344769 - AluSx SINE Alu -5 307 1 254 269 133 23 chr20 3323243 3323499 -63344506 - L1MC4a LINE L1 -1481 4665 4382 2451 114 28 19 chr20 3323511 3323872 -63344133 + THE1B LTR MaLR 1 364 0 595 254 207 65 chr20 3324019 3324621 -63343384 - L2 LINE L2 0 3313 2622 1926 161 0 3 chr20 3324621 3324919 -63343086 + AluJb SINE Alu 1 297 -15 595 254 207 65 chr20 3324919 3324956 -63343049 - L2 LINE L2 -691 2622 2592 2484 90 0 0 chr20 3324963 3325274 -63342731 - AluY SINE Alu 0 311 1 260 309 157 20 chr20 3325409 3325613 -63342392 - L1MC4a LINE L1 -2293 3853 3622 354 234 43 11 chr20 3326005 3326099 -63341906 + MLT1K LTR MaLR 492 588 0 274 284 38 71 chr20 3326112 3326323 -63341682 + L1MC4 LINE L1 7838 8041 -1 2183 113 30 0 chr20 3326863 3327164 -63340841 - AluSg SINE Alu 0 310 1 445 241 65 121 chr20 3327238 3327470 -63340535 + MLT1J LTR MaLR 156 374 -137 1148 157 7 117 chr20 3327886 3328186 -63339819 + L1MD3 LINE L1 7719 7985 -10 2139 108 24 3 chr20 3328860 3329156 -63338849 - AluSx SINE Alu -10 302 1 961 181 101 21 chr20 3329617 3329855 -63338150 - HAL1 LINE L1 -787 1720 1464 1656 148 75 35 chr20 3329914 3330236 -63337769 - L1MA8 LINE L1 0 6291 5951 1575 161 0 23 chr20 3330236 3330496 -63337509 - AluJo SINE Alu -14 298 45 1656 148 75 35 chr20 3330496 3330544 -63337461 - L1MA8 LINE L1 -340 5951 5906 333 256 83 16 chr20 3330534 3330655 -63337350 - HAL1 LINE L1 -1106 1401 1273 * 300 261 89 9 chr20 3330655 3330835 -63337170 + L2 LINE L2 539 793 -2521 1618 225 133 43 chr20 3330840 3331462 -63336543 + L2 LINE L2 1154 1831 -1483 700 127 9 9 chr20 3331480 3331590 -63336415 - FLAM_A SINE Alu -14 128 19 376 205 0 13 chr20 3331613 3331691 -63336314 + L2 LINE L2 1865 1941 -1373 2273 100 0 20 chr20 3331691 3331992 -63336013 - AluSq SINE Alu -18 295 1 328 206 0 15 chr20 3332070 3332138 -63335867 - HAL1 LINE L1 -925 1582 1516 218 128 26 0 chr20 3332151 3332190 -63335815 + L2 LINE L2 2412 2451 -863 202 270 128 40 chr20 3332227 3332375 -63335630 + L2 LINE L2 3119 3279 -34 713 328 136 3 chr20 3332496 3332856 -63335149 - MLT1I LTR MaLR -1 408 1 29 70 0 0 chr20 3335294 3335351 -63332654 + GC_rich Low_complexity Low_complexity 1 57 0 203 61 30 0 chr20 3335351 3335384 -63332621 + (CGGGGG)n Simple_repeat Simple_repeat 5 38 0 185 130 43 0 chr20 3335624 3335670 -63332335 + (CCCCG)n Simple_repeat Simple_repeat 1 48 0 2295 78 7 0 chr20 3336642 3336937 -63331068 - AluSx SINE Alu -15 297 1 2162 114 13 3 chr20 3336937 3337244 -63330761 - AluSx SINE Alu -2 310 1 657 209 0 0 chr20 3337634 3337744 -63330261 + FLAM_A SINE Alu 7 116 -26 267 137 27 27 chr20 3337759 3337832 -63330173 + (TA)n Simple_repeat Simple_repeat 2 74 0 1093 168 0 0 chr20 3337840 3338013 -63329992 + AluJb SINE Alu 127 299 -13 4225 171 31 28 chr20 3338019 3338746 -63329259 - L1MB7 LINE L1 -82 6102 5363 2609 65 3 0 chr20 3338746 3339053 -63328952 - AluSp SINE Alu -5 308 1 4225 171 31 28 chr20 3339053 3339570 -63328435 - L1MB7 LINE L1 -821 5363 4849 2170 122 3 0 chr20 3340556 3340852 -63327153 - AluSq SINE Alu -16 297 1 1595 179 26 29 chr20 3340939 3341252 -63326753 + AluJo SINE Alu 1 312 0 1946 145 20 7 chr20 3341573 3341876 -63326129 - AluSx SINE Alu -5 307 1 330 143 18 0 chr20 3342154 3342210 -63325795 - MSTA LTR MaLR 0 428 372 553 31 0 0 chr20 3342244 3342308 -63325697 - MSTA LTR MaLR -40 388 325 * 2596 99 63 5 chr20 3342287 3342681 -63325324 - MSTA LTR MaLR -11 417 1 6323 159 7 22 chr20 3342686 3343743 -63324262 - MSTA-int LTR MaLR -6 1645 605 1358 157 0 0 chr20 3343743 3343941 -63324064 - AluSq SINE Alu -115 198 1 3592 162 0 0 chr20 3343942 3344537 -63323468 - MSTA-int LTR MaLR -1026 568 1 2608 115 66 5 chr20 3344547 3344939 -63323066 - MSTA LTR MaLR -12 416 1 391 132 146 62 chr20 3345166 3345310 -63322695 - MER53 DNA DNA -33 156 1 2214 117 0 0 chr20 3345378 3345669 -63322336 + AluSg SINE Alu 1 291 -19 2524 198 71 94 chr20 3345683 3345853 -63322152 - L1ME2 LINE L1 0 6164 5992 312 27 0 0 chr20 3345853 3345890 -63322115 + (CA)n Simple_repeat Simple_repeat 2 38 0 2524 198 71 94 chr20 3345890 3345948 -63322057 - L1ME2 LINE L1 -172 5992 5934 1986 157 0 10 chr20 3345948 3346253 -63321752 - AluJo SINE Alu -10 302 1 2524 198 71 94 chr20 3346253 3346673 -63321332 - L1ME2 LINE L1 -230 5934 5506 2312 105 3 3 chr20 3346673 3346978 -63321027 + AluSx SINE Alu 3 307 -5 2524 198 71 94 chr20 3346978 3347319 -63320686 - L1ME2 LINE L1 -658 5506 5201 2244 111 0 3 chr20 3347319 3347616 -63320389 - AluSq SINE Alu -6 307 12 2524 198 71 94 chr20 3347616 3347699 -63320306 - L1ME2 LINE L1 -963 5201 5118 349 224 41 10 chr20 3348006 3348019 -63319986 - MIR SINE MIR -71 191 180 2571 190 43 24 chr20 3348019 3348551 -63319454 + MLT1F LTR MaLR 1 542 0 349 224 41 10 chr20 3348551 3348635 -63319370 - MIR SINE MIR -82 180 91 768 168 0 28 chr20 3348704 3348840 -63319165 + FLAM_C SINE Alu 2 135 -177 2546 65 0 0 chr20 3348840 3349134 -63318871 - AluSq SINE Alu -19 294 1 39 31 0 16 chr20 3349140 3349177 -63318828 + AT_rich Low_complexity Low_complexity 1 38 -25 1652 166 0 18 chr20 3349177 3349454 -63318551 + AluJb SINE Alu 15 286 -26 39 31 0 16 chr20 3349454 3349480 -63318525 + AT_rich Low_complexity Low_complexity 38 63 0 186 291 55 0 chr20 3349662 3349717 -63318288 - MIR SINE MIR -195 67 10 3009 145 8 22 chr20 3350024 3350534 -63317471 + L1PB4 LINE L1 5654 6156 0 355 193 40 40 chr20 3350536 3350712 -63317293 + (TATAA)n Simple_repeat Simple_repeat 1 176 0 218 100 67 0 chr20 3350760 3350820 -63317185 + (TA)n Simple_repeat Simple_repeat 2 65 0 1286 230 65 25 chr20 3350880 3351202 -63316803 + LTR16C LTR ERVL 139 473 -18 2315 103 6 0 chr20 3351378 3351689 -63316316 + AluSp SINE Alu 1 313 0 2278 94 17 0 chr20 3351816 3352113 -63315892 + AluSx SINE Alu 1 302 -10 1497 85 60 0 chr20 3352179 3352378 -63315627 + AluSq SINE Alu 81 291 -22 692 249 16 104 chr20 3352379 3352545 -63315460 + L1MA9 LINE L1 5942 6060 -252 1775 174 7 0 chr20 3352545 3352832 -63315173 - AluJb SINE Alu -23 289 1 692 249 16 104 chr20 3352832 3353030 -63314975 + L1MA9 LINE L1 6060 6274 -38 466 228 110 55 chr20 3353037 3353150 -63314855 + L1ME LINE L1 5314 5419 -743 2300 84 10 7 chr20 3353150 3353446 -63314559 + AluSg SINE Alu 1 297 -13 466 228 110 55 chr20 3353446 3353586 -63314419 + L1ME LINE L1 5419 5581 -581 664 144 0 103 chr20 3353614 3353760 -63314245 + AluJ SINE Alu 2 132 -180 1624 174 50 4 chr20 3353809 3354090 -63313915 + AluJb SINE Alu 1 294 -18 21 0 0 0 chr20 3354347 3354368 -63313637 + AT_rich Low_complexity Low_complexity 1 21 0 32 0 0 0 chr20 3354466 3354498 -63313507 + AT_rich Low_complexity Low_complexity 1 32 0 1818 180 0 7 chr20 3354499 3354788 -63313217 - AluJo SINE Alu -25 287 1 1879 186 95 3 chr20 3355008 3355378 -63312627 - MER41D LTR ERV1 -9 548 145 517 137 147 0 chr20 3355378 3355473 -63312532 + AluJ SINE Alu 120 228 -84 2279 105 0 0 chr20 3355491 3355795 -63312210 - AluSc SINE Alu -5 304 1 291 100 0 0 chr20 3355807 3355847 -63312158 - MER41D LTR ERV1 -417 140 101 537 132 0 0 chr20 3355852 3355928 -63312077 - AluSq SINE Alu -153 160 85 1180 124 0 0 chr20 3355928 3356089 -63311916 - AluSx SINE Alu -133 179 19 499 133 0 0 chr20 3356090 3356165 -63311840 - MER41D LTR ERV1 -482 75 1 314 326 54 45 chr20 3356167 3356294 -63311711 + L1ME LINE L1 5347 5478 -643 1835 106 35 77 chr20 3356294 3356605 -63311400 + AluSx SINE Alu 1 298 -14 314 326 54 45 chr20 3356605 3356719 -63311286 + L1ME LINE L1 5478 5590 -531 656 274 5 53 chr20 3356962 3357170 -63310835 - MLT1J LTR MaLR -228 283 86 1023 118 0 0 chr20 3357215 3357350 -63310655 + AluSq/x SINE Alu 1 135 -178 2106 134 0 7 chr20 3357350 3357655 -63310350 + AluSx SINE Alu 1 303 -9 2919 82 31 11 chr20 3357747 3358206 -63309799 - MER1A DNA MER1_type 0 529 25 963 223 54 132 chr20 3358203 3358687 -63309318 + LTR16A1 LTR ERVL 12 457 0 * 244 286 104 49 chr20 3358795 3359081 -63308924 + MLT1I LTR MaLR 1 334 -215 2445 57 0 0 chr20 3359224 3359530 -63308475 + AluY SINE Alu 1 306 0 576 293 61 26 chr20 3360349 3360630 -63307375 + LTR16A LTR ERVL 1 360 -90 830 152 94 7 chr20 3360639 3360803 -63307202 - AluJb SINE Alu -25 287 141 242 284 84 0 chr20 3360914 3361009 -63306996 + HAL1 LINE L1 17 119 -2388 1768 189 0 10 chr20 3361042 3361338 -63306667 + AluJo SINE Alu 1 293 -19 271 225 0 28 chr20 3361338 3361409 -63306596 + L1MC3 LINE L1 5868 5936 -1872 1061 144 29 0 chr20 3362145 3362319 -63305686 - AluSg/x SINE Alu 0 312 134 1192 271 60 2 chr20 3362320 3362702 -63305303 - L1MC4 LINE L1 -533 7509 7101 1978 145 0 0 chr20 3362702 3363005 -63305000 - AluSx SINE Alu -9 303 1 1192 271 60 2 chr20 3363005 3363024 -63304981 - L1MC4 LINE L1 -941 7101 7085 896 139 0 14 chr20 3363038 3363182 -63304823 + FLAM_C SINE Alu 1 142 -1 818 210 0 0 chr20 3363219 3363362 -63304643 - FRAM SINE Alu -20 156 14 415 216 36 0 chr20 3363380 3363491 -63304514 - L1MC4 LINE L1 -968 7074 6960 833 150 0 8 chr20 3364183 3364310 -63303695 + FLAM_C SINE Alu 2 127 -16 432 261 54 0 chr20 3364328 3364439 -63303566 + HAL1 LINE L1 10 126 -2381 1819 145 0 39 chr20 3364494 3364804 -63303201 + AluJb SINE Alu 1 298 -14 251 231 0 0 chr20 3365179 3365231 -63302774 + LTR37B LTR ERV1 233 284 -184 423 0 0 0 chr20 3365289 3365336 -63302669 + (CA)n Simple_repeat Simple_repeat 2 48 0 2468 40 10 0 chr20 3365339 3365636 -63302369 - AluY SINE Alu -11 300 1 1285 135 60 71 chr20 3365636 3365685 -63302320 - MER41D LTR ERV1 -294 263 215 2157 122 0 0 chr20 3365685 3365989 -63302016 - AluSx SINE Alu -8 304 1 1285 135 60 71 chr20 3365989 3366205 -63301800 - MER41D LTR ERV1 -342 215 1 229 243 27 40 chr20 3366206 3366280 -63301725 + HAL1 LINE L1 1316 1388 -1119 1822 143 3 3 chr20 3366281 3366567 -63301438 + AluJo SINE Alu 1 286 -26 324 70 0 0 chr20 3366568 3366611 -63301394 + (CA)n Simple_repeat Simple_repeat 2 44 0 2902 185 141 121 chr20 3366611 3367192 -63300813 + L1MC3 LINE L1 6542 7110 -675 333 216 52 72 chr20 3367192 3367289 -63300716 + MLT1F1 LTR MaLR 39 133 -434 2902 185 141 121 chr20 3367289 3367792 -63300213 + L1MC3 LINE L1 7110 7745 -40 180 0 0 0 chr20 3367792 3367812 -63300193 + (T)n Simple_repeat Simple_repeat 1 20 0 640 253 0 39 chr20 3367905 3368059 -63299946 - L2 LINE L2 -1 3312 3165 229 363 25 0 chr20 3368029 3368109 -63299896 - L2 LINE L2 -646 2668 2587 * 6040 63 32 76 chr20 3368110 3369536 -63298469 - SVA Other Other -645 1384 342 521 122 0 0 chr20 3369551 3369625 -63298380 - AluJb SINE Alu -187 125 52 1844 142 7 10 chr20 3369634 3369930 -63298075 - AluJo SINE Alu -17 295 1 450 211 45 23 chr20 3369982 3370115 -63297890 + HAL1 LINE L1 1392 1527 -980 436 263 42 94 chr20 3370249 3370462 -63297543 + HAL1 LINE L1 2112 2313 -194 201 200 73 0 chr20 3370542 3370597 -63297408 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 2010 90 72 0 chr20 3370769 3371048 -63296957 + AluSq SINE Alu 1 299 -14 252 256 44 15 chr20 3371480 3371617 -63296388 + L1MEd LINE L1 796 936 -5269 264 159 71 40 chr20 3371784 3371910 -63296095 + (TTATA)n Simple_repeat Simple_repeat 4 133 0 1622 173 3 0 chr20 3372038 3372322 -63295683 + AluJo SINE Alu 12 296 -16 712 331 69 38 chr20 3372329 3372564 -63295441 + L1MEd LINE L1 1663 1889 -4507 2055 112 0 20 chr20 3372564 3372869 -63295136 + AluSc SINE Alu 1 299 -10 712 331 69 38 chr20 3372869 3373151 -63294854 + L1MEd LINE L1 1889 2200 -4196 868 122 0 43 chr20 3373151 3373290 -63294715 + FLAM_C SINE Alu 1 133 0 712 331 69 38 chr20 3373290 3373305 -63294700 + L1MEd LINE L1 2200 2213 -4183 404 285 16 48 chr20 3373317 3373341 -63294664 + L1MEd LINE L1 2467 2490 -3725 1733 156 21 14 chr20 3373341 3373629 -63294376 + AluSx SINE Alu 1 290 -22 404 285 16 48 chr20 3373629 3373790 -63294215 + L1MEd LINE L1 2490 2646 -3569 923 293 81 7 chr20 3374007 3374465 -63293540 + L1MEd LINE L1 3213 3704 -2511 261 258 105 72 chr20 3374490 3374544 -63293461 + L1M4 LINE L1 4704 4755 -1391 1508 175 0 53 chr20 3374544 3374847 -63293158 + AluJb SINE Alu 3 289 -23 261 258 105 72 chr20 3374847 3375001 -63293004 + L1M4 LINE L1 4755 4919 -1227 314 279 137 6 chr20 3375001 3375162 -63292843 - LTR33A LTR ERVL -50 473 292 228 303 90 48 chr20 3375233 3375421 -63292584 - LTR50 LTR ERVL -564 231 36 466 254 88 82 chr20 3375427 3375567 -63292438 + L1M4 LINE L1 4925 5063 -1083 2162 105 0 0 chr20 3375567 3375863 -63292142 - AluSx SINE Alu -16 296 1 466 254 88 82 chr20 3375863 3375943 -63292062 + L1M4 LINE L1 5063 5141 -1005 1922 89 31 21 chr20 3375943 3376234 -63291771 - AluSp SINE Alu -19 294 1 832 139 31 0 chr20 3376240 3376369 -63291636 - FLAM_C SINE Alu 0 133 1 466 254 88 82 chr20 3376369 3376482 -63291523 + L1M4 LINE L1 5145 5268 -878 2229 113 0 0 chr20 3376548 3376857 -63291148 - AluSx SINE Alu -3 309 1 291 161 0 18 chr20 3376890 3376946 -63291059 + AluSp/q SINE Alu 242 296 -7 258 232 0 0 chr20 3376947 3377003 -63291002 + HAL1 LINE L1 2312 2367 -140 242 246 35 0 chr20 3377039 3377096 -63290909 + CT-rich Low_complexity Low_complexity 2 60 0 1029 208 5 5 chr20 3377096 3377308 -63290697 - AluJb SINE Alu -17 295 84 257 280 0 0 chr20 3377308 3377383 -63290622 + HAL1 LINE L1 2432 2506 -1 1918 96 0 32 chr20 3377533 3377813 -63290192 + AluSx SINE Alu 26 296 -16 436 301 29 21 chr20 3377819 3378098 -63289907 + L1M4 LINE L1 4754 5034 -1112 2368 76 3 0 chr20 3378502 3378803 -63289202 - AluSc SINE Alu -7 302 1 1542 145 48 7 chr20 3378813 3379104 -63288901 - AluJo SINE Alu 0 304 3 290 311 47 14 chr20 3379105 3379253 -63288752 + MLT1K LTR MaLR 421 573 -15 1476 185 16 53 chr20 3379414 3379733 -63288272 + AluJb SINE Alu 1 307 -5 486 252 14 84 chr20 3379911 3380125 -63287880 - MLT1K LTR MaLR -66 522 324 625 311 100 65 chr20 3380140 3380629 -63287376 - MLT1K LTR MaLR -8 580 75 1288 244 79 16 chr20 3380854 3381284 -63286721 - LTR16A1 LTR ERVL 0 457 1 1780 174 20 103 chr20 3381356 3381406 -63286599 - L1MA9 LINE L1 -38 6274 6221 1589 99 41 0 chr20 3381406 3381627 -63286378 + MER30 DNA MER1_type 1 230 0 1780 174 20 103 chr20 3381627 3381928 -63286077 - L1MA9 LINE L1 -91 6221 5973 1603 181 4 4 chr20 3381928 3382209 -63285796 - AluJb SINE Alu -31 281 1 1780 174 20 103 chr20 3382209 3382349 -63285656 - L1MA9 LINE L1 -339 5973 5823 699 154 8 0 chr20 3382349 3382466 -63285539 - FLAM_C SINE Alu -2 141 24 1874 234 64 21 chr20 3382600 3383070 -63284935 + LTR16C LTR ERVL 1 490 -1 24 53 0 0 chr20 3383176 3383214 -63284791 + AT_rich Low_complexity Low_complexity 1 38 0 288 154 0 0 chr20 3383296 3383348 -63284657 + U5 snRNA snRNA 1 52 -64 1867 118 4 0 chr20 3383369 3383641 -63284364 + AluSx SINE Alu 1 273 -39 556 219 7 7 chr20 3383641 3383796 -63284209 + GA-rich Low_complexity Low_complexity 2 156 0 2246 91 3 0 chr20 3383924 3384221 -63283784 + AluSx SINE Alu 1 298 -14 667 266 81 9 chr20 3384834 3385056 -63282949 - MIR SINE MIR -6 256 19 246 322 11 33 chr20 3385157 3385247 -63282758 + MIR SINE MIR 33 120 -88 1256 177 109 26 chr20 3385844 3385945 -63282060 + AluJb SINE Alu 1 92 -210 228 67 0 0 chr20 3385945 3385975 -63282030 + (CAA)n Simple_repeat Simple_repeat 2 31 0 1256 177 109 26 chr20 3385975 3386138 -63281867 + AluJb SINE Alu 92 287 -15 188 183 0 33 chr20 3386139 3386199 -63281806 + (CATA)n Simple_repeat Simple_repeat 2 59 0 262 328 0 0 chr20 3386435 3386502 -63281503 + L2 LINE L2 3107 3173 -99 1966 121 0 0 chr20 3386722 3387053 -63280952 - AluSx SINE Alu 0 331 1 456 19 0 0 chr20 3387227 3387280 -63280725 + (TG)n Simple_repeat Simple_repeat 1 53 0 1914 123 0 46 chr20 3388014 3388130 -63279875 - AluSq SINE Alu -2 311 191 2371 60 3 0 chr20 3388130 3388430 -63279575 - AluY SINE Alu -10 301 1 1914 123 0 46 chr20 3388430 3388639 -63279366 - AluSq SINE Alu -122 191 1 1247 261 164 3 chr20 3388904 3389294 -63278711 + LTR16B LTR ERVL 1 453 -11 912 261 20 0 chr20 3389308 3389507 -63278498 - MER63A DNA MER1_type -7 203 1 488 228 35 48 chr20 3389507 3389652 -63278353 + L1ME LINE L1 5642 5784 -386 821 181 44 0 chr20 3389671 3389831 -63278174 - AluJo/FRAM SINE Alu -12 300 134 1501 176 7 29 chr20 3389831 3390137 -63277868 - AluJo SINE Alu -13 299 1 2064 119 3 0 chr20 3390145 3390440 -63277565 - AluSx SINE Alu -16 296 1 2051 152 3 0 chr20 3390440 3390763 -63277242 - L1M3 LINE L1 -374 5797 5474 683 173 8 31 chr20 3390764 3390891 -63277114 - FLAM_A SINE Alu -5 128 5 2153 109 0 10 chr20 3390923 3391227 -63276778 - AluSx SINE Alu -11 301 1 330 252 18 45 chr20 3391281 3391392 -63276613 + L2 LINE L2 3206 3313 0 1227 182 146 77 chr20 3391422 3391528 -63276477 + MLT1D LTR MaLR 1 98 -407 2094 101 7 13 chr20 3391528 3391834 -63276171 + AluSx SINE Alu 2 305 -7 1227 182 146 77 chr20 3391834 3392145 -63275860 + MLT1D LTR MaLR 98 447 -58 1030 179 0 0 chr20 3392367 3392535 -63275470 + FAM SINE Alu 4 171 -4 207 0 0 0 chr20 3392599 3392622 -63275383 + (T)n Simple_repeat Simple_repeat 1 23 0 381 360 56 13 chr20 3392622 3392855 -63275150 + L1M4 LINE L1 2151 2393 -3753 272 222 25 0 chr20 3393120 3393201 -63274804 + CT-rich Low_complexity Low_complexity 4 86 0 412 180 90 0 chr20 3393404 3393493 -63274512 + MLT1D LTR MaLR 407 503 -2 1027 224 57 24 chr20 3394400 3394646 -63273359 + LTR16A1 LTR ERVL 204 457 0 394 265 146 40 chr20 3395238 3395389 -63272616 - MLT1H1 LTR MaLR 0 595 429 * 957 202 80 106 chr20 3395356 3395591 -63272414 - MLT1H1 LTR MaLR -251 304 77 243 0 0 0 chr20 3395591 3395618 -63272387 + (TGGGGG)n Simple_repeat Simple_repeat 3 29 0 957 202 80 106 chr20 3395618 3395694 -63272311 - MLT1H1 LTR MaLR -478 77 1 1888 148 3 13 chr20 3395761 3396072 -63271933 - AluJo SINE Alu -3 309 2 369 243 73 68 chr20 3396831 3397172 -63270833 - MLT1G1 LTR MaLR 0 595 248 2036 86 46 0 chr20 3397225 3397505 -63270500 - AluSg SINE Alu -17 293 1 200 255 0 20 chr20 3397885 3397936 -63270069 - L2 LINE L2 -1 3271 3222 1808 129 11 3 chr20 3397939 3398225 -63269780 - AluJb SINE Alu -24 288 1 186 143 0 0 chr20 3398581 3398616 -63269389 + (CACG)n Simple_repeat Simple_repeat 3 37 0 202 235 0 49 chr20 3398766 3398847 -63269158 + (CGG)n Simple_repeat Simple_repeat 2 78 0 318 132 0 0 chr20 3398943 3398996 -63269009 + (CTG)n Simple_repeat Simple_repeat 3 55 0 201 143 0 0 chr20 3399003 3399038 -63268967 + (CGG)n Simple_repeat Simple_repeat 2 36 0 601 267 131 74 chr20 3400046 3400413 -63267592 - L2 LINE L2 0 3313 2926 410 275 258 11 chr20 3400752 3401201 -63266804 - L2 LINE L2 -13 3300 2755 220 301 187 28 chr20 3401491 3401780 -63266225 - L2 LINE L2 -719 2595 2261 2275 53 3 0 chr20 3402083 3402389 -63265616 + AluY SINE Alu 1 307 0 2167 92 3 3 chr20 3402408 3402711 -63265294 + AluSg SINE Alu 1 303 -7 234 205 181 24 chr20 3402969 3403052 -63264953 - MIR SINE MIR -15 247 152 1752 165 0 3 chr20 3403523 3403826 -63264179 + AluJb SINE Alu 5 306 -6 426 278 105 23 chr20 3403885 3404018 -63263987 - MIR SINE MIR -113 149 6 2245 94 0 3 chr20 3404235 3404534 -63263471 + AluSq SINE Alu 3 300 -13 224 233 0 0 chr20 3404651 3404694 -63263311 + L2 LINE L2 3180 3222 -91 224 233 0 0 chr20 3404728 3404771 -63263234 + L2 LINE L2 3180 3222 -91 221 219 0 0 chr20 3404805 3404846 -63263159 + L2 LINE L2 3180 3220 -93 240 209 0 0 chr20 3404882 3404925 -63263080 + L2 LINE L2 3180 3222 -91 240 209 0 0 chr20 3404959 3405002 -63263003 + L2 LINE L2 3180 3222 -91 224 233 0 0 chr20 3405036 3405079 -63262926 + L2 LINE L2 3180 3222 -91 240 209 0 0 chr20 3405113 3405156 -63262849 + L2 LINE L2 3180 3222 -91 224 233 0 0 chr20 3405190 3405233 -63262772 + L2 LINE L2 3180 3222 -91 307 181 25 188 chr20 3405267 3405427 -63262578 + L2 LINE L2 3180 3313 0 185 319 104 39 chr20 3405445 3405705 -63262300 + L2 LINE L2 2196 2472 -842 3266 72 54 39 chr20 3405870 3406353 -63261652 + L1PA7 LINE L1 5664 6153 -1 1381 175 130 0 chr20 3406578 3406847 -63261158 - AluJo SINE Alu -8 304 1 391 354 52 68 chr20 3406881 3407245 -63260760 - L2 LINE L2 -4 3268 2911 1800 212 67 25 chr20 3407245 3407693 -63260312 - MLT1C LTR MaLR 0 467 1 391 354 52 68 chr20 3407693 3407769 -63260236 - L2 LINE L2 -361 2911 2835 419 301 93 82 chr20 3407832 3408261 -63259744 + MLT1K LTR MaLR 155 588 0 242 128 0 0 chr20 3408292 3408331 -63259674 - MLT1A1 LTR MaLR -4 361 323 1459 181 14 31 chr20 3409012 3409300 -63258705 - AluJo SINE Alu -27 285 3 201 74 0 0 chr20 3409443 3409470 -63258535 + (T)n Simple_repeat Simple_repeat 1 27 0 25 112 0 0 chr20 3409715 3409831 -63258174 + AT_rich Low_complexity Low_complexity 1 116 0 308 224 58 71 chr20 3410863 3411009 -63256996 - L1ME LINE L1 -311 5842 5684 1614 187 3 3 chr20 3411009 3411303 -63256702 - AluJb SINE Alu -18 294 1 308 224 58 71 chr20 3411303 3411360 -63256645 - L1ME LINE L1 -469 5684 5628 245 239 65 84 chr20 3411360 3411623 -63256382 - Charlie2 DNA MER1_type -1 2861 2604 1885 182 3 3 chr20 3411623 3411930 -63256075 + AluJo SINE Alu 1 307 -5 560 329 32 16 chr20 3411953 3412202 -63255803 - L1ME LINE L1 -1008 5121 4869 313 292 47 76 chr20 3412284 3412520 -63255485 - L1ME LINE L1 -1517 4612 4384 351 0 0 0 chr20 3412566 3412605 -63255400 + (TTA)n Simple_repeat Simple_repeat 2 40 0 391 269 117 59 chr20 3412811 3413067 -63254938 - L1ME LINE L1 -1820 4309 4039 334 260 26 52 chr20 3413101 3413267 -63254738 - L1ME LINE L1 -2248 3881 3719 2416 97 0 0 chr20 3413267 3413576 -63254429 - AluSg SINE Alu -1 309 1 334 260 26 52 chr20 3413576 3413601 -63254404 - L1ME LINE L1 -2410 3719 3695 317 316 48 0 chr20 3413618 3413815 -63254190 - L1ME LINE L1 -875 1615 1426 314 171 53 135 chr20 3413835 3414005 -63254000 - L1MC5 LINE L1 -48 7913 7758 1597 164 92 0 chr20 3414052 3414333 -63253672 - AluSx SINE Alu 0 312 6 1080 286 101 57 chr20 3414432 3414904 -63253101 - L1MEd LINE L1 -4840 1289 839 1889 101 8 0 chr20 3414904 3415152 -63252853 - AluSg1 SINE Alu -24 285 36 1080 286 101 57 chr20 3415152 3415834 -63252171 - L1MEd LINE L1 -5290 839 91 1280 259 58 62 chr20 3415854 3416603 -63251402 - L1M4 LINE L1 -984 5162 4414 2190 91 0 0 chr20 3416603 3416906 -63251099 - AluSx SINE Alu 0 314 12 1280 259 58 62 chr20 3416906 3416943 -63251062 - L1M4 LINE L1 -1732 4414 4378 666 278 158 39 chr20 3418815 3419308 -63248697 + L2 LINE L2 1702 2253 -1061 219 304 108 10 chr20 3419347 3419449 -63248556 + L2 LINE L2 2437 2548 -766 324 0 0 0 chr20 3419825 3419861 -63248144 + (TG)n Simple_repeat Simple_repeat 2 37 0 282 95 0 0 chr20 3420469 3420511 -63247494 + (GA)n Simple_repeat Simple_repeat 2 43 0 213 39 0 0 chr20 3420528 3420554 -63247451 + (CA)n Simple_repeat Simple_repeat 1 26 0 286 125 57 40 chr20 3420560 3420736 -63247269 + (TA)n Simple_repeat Simple_repeat 2 180 0 23 0 0 0 chr20 3420736 3420759 -63247246 + AT_rich Low_complexity Low_complexity 1 23 0 246 32 0 0 chr20 3420775 3420806 -63247199 + (TG)n Simple_repeat Simple_repeat 2 32 0 1622 179 3 27 chr20 3420820 3421117 -63246888 - AluJo SINE Alu -22 290 1 880 116 8 0 chr20 3421118 3421239 -63246766 - AluJo SINE Alu -178 134 13 184 330 135 69 chr20 3421598 3421977 -63246028 - L2 LINE L2 -50 3222 2819 192 322 58 58 chr20 3422018 3422192 -63245813 - L2 LINE L2 -570 2744 2571 262 321 28 9 chr20 3422361 3422467 -63245538 - L2 LINE L2 -1026 2288 2181 23 0 0 0 chr20 3422716 3422739 -63245266 + AT_rich Low_complexity Low_complexity 1 23 0 284 286 150 41 chr20 3422960 3423107 -63244898 - MER5B DNA MER1_type -15 163 1 559 249 128 48 chr20 3423305 3423718 -63244287 + L1MC4a LINE L1 5749 6194 -1614 14504 23 0 5 chr20 3423741 3425570 -63242435 - L1PA3 LINE L1 -2928 3218 1399 18095 28 1 2 chr20 3425570 3428502 -63239503 + L1PA3 LINE L1 3217 6151 -4 35 0 0 0 chr20 3428502 3428537 -63239468 + AT_rich Low_complexity Low_complexity 1 35 0 630 310 35 22 chr20 3428847 3429163 -63238842 + L1MC4a LINE L1 6495 6814 -994 394 291 40 84 chr20 3429177 3429428 -63238577 + L1MEd LINE L1 348 587 -5829 3363 211 73 70 chr20 3429916 3432051 -63235954 + L1MDb LINE L1 7 2009 -4397 1976 123 3 31 chr20 3432051 3432396 -63235609 + AluSq SINE Alu 1 337 0 3363 211 73 70 chr20 3432396 3432670 -63235335 + L1MDb LINE L1 2009 2281 -4125 2746 193 32 2 chr20 3432670 3433199 -63234806 + MLT2B3 LTR ERVL 2 546 -8 851 207 132 3 chr20 3433200 3433552 -63234453 + L1MDb LINE L1 2273 2672 -3734 1352 191 21 82 chr20 3433565 3433956 -63234049 + L1MD2 LINE L1 5971 6358 -1 359 140 0 110 chr20 3433955 3433998 -63234007 + L1MD3 LINE L1 7698 7725 -270 * 2186 124 0 3 chr20 3433998 3434304 -63233701 + AluSx SINE Alu 1 305 -7 359 140 0 110 chr20 3434304 3434360 -63233645 + L1MD3 LINE L1 7725 7786 -209 186 43 0 0 chr20 3434360 3434383 -63233622 + (CA)n Simple_repeat Simple_repeat 2 24 0 327 289 75 64 chr20 3434385 3434665 -63233340 + L1MEd LINE L1 1084 1366 -5050 495 53 0 160 chr20 3434666 3434760 -63233245 + MADE1 DNA Mariner 2 80 0 2277 81 7 17 chr20 3434781 3435079 -63232926 + AluSg1 SINE Alu 1 295 -14 236 35 0 0 chr20 3435091 3435120 -63232885 - MADE1 DNA Mariner -43 37 9 263 292 44 15 chr20 3435156 3435293 -63232712 + L1MEd LINE L1 1252 1392 -5034 2136 62 52 72 chr20 3435351 3435657 -63232348 - AluSc SINE Alu -7 302 3 766 129 9 9 chr20 3435723 3435839 -63232166 + FLAM_C SINE Alu 1 116 -27 22 35 0 0 chr20 3435841 3435870 -63232135 + AT_rich Low_complexity Low_complexity 1 29 0 764 257 119 63 chr20 3435870 3435989 -63232016 + L1MEd LINE L1 1511 1622 -4804 923 199 92 10 chr20 3435989 3436195 -63231810 - MER58A DNA MER1_type 0 224 2 764 257 119 63 chr20 3436195 3437139 -63230866 + L1MEd LINE L1 1622 2781 -3645 2119 114 0 23 chr20 3437154 3437460 -63230545 - AluSx SINE Alu -13 299 1 1303 245 62 90 chr20 3437466 3437919 -63230086 - L1MC4 LINE L1 0 8042 7623 974 228 9 9 chr20 3437919 3438143 -63229862 - MER58A DNA MER1_type 0 224 1 1303 245 62 90 chr20 3438143 3438546 -63229459 - L1MC4 LINE L1 -419 7623 7210 700 224 122 25 chr20 3438650 3439011 -63228994 + L1MEd LINE L1 3151 3546 -2880 207 0 0 0 chr20 3439742 3439765 -63228240 + (TA)n Simple_repeat Simple_repeat 1 23 0 9502 32 14 0 chr20 3439765 3441692 -63226313 - L1PA4 LINE L1 -2 6153 4211 915 74 0 0 chr20 3441697 3441818 -63226187 - L1P LINE L1 -6025 121 1 1061 259 91 37 chr20 3441873 3442334 -63225671 + L1MEd LINE L1 3764 4277 -2149 1859 164 10 0 chr20 3442334 3442633 -63225372 + AluJb SINE Alu 1 302 -10 1061 259 91 37 chr20 3442633 3442874 -63225131 + L1MEd LINE L1 4277 4504 -1922 827 278 140 105 chr20 3442895 3444030 -63223975 - L2 LINE L2 -1039 2275 1101 493 245 66 0 chr20 3444045 3444196 -63223809 - MER104 DNA Tc2 -16 164 4 240 185 15 31 chr20 3444199 3444264 -63223741 - MLT1L LTR MaLR -6 609 546 3319 56 9 0 chr20 3444380 3444812 -63223193 - L1PA7 LINE L1 -236 5918 5483 335 277 130 12 chr20 3444858 3445111 -63222894 + L1ME4a LINE L1 5813 6095 -26 1913 122 0 0 chr20 3445182 3445444 -63222561 + AluSx SINE Alu 38 299 -13 705 137 144 7 chr20 3446031 3446170 -63221835 + L1MB7 LINE L1 5864 6021 -163 525 158 50 8 chr20 3446174 3446294 -63221711 + L1MB7 LINE L1 6060 6184 0 406 222 202 30 chr20 3446325 3446528 -63221477 - L1MC5 LINE L1 -118 7843 7606 333 284 37 8 chr20 3446532 3446666 -63221339 - L1ME LINE L1 -302 5819 5682 384 325 80 15 chr20 3447060 3447260 -63220745 + HAL1 LINE L1 1055 1267 -1240 736 155 8 23 chr20 3447260 3447414 -63220591 + L1PB2 LINE L1 6013 6164 0 250 275 50 17 chr20 3447480 3447600 -63220405 + HAL1 LINE L1 1516 1639 -868 2005 148 0 7 chr20 3448149 3448453 -63219552 - AluSx SINE Alu -10 302 1 229 114 91 0 chr20 3448596 3448640 -63219365 + L1MEc LINE L1 2424 2471 -3925 924 142 24 0 chr20 3448641 3448810 -63219195 + L1PA16 LINE L1 5876 6048 -118 225 121 52 52 chr20 3448812 3448870 -63219135 + L1MEc LINE L1 2954 3011 -3204 517 180 90 0 chr20 3448884 3449006 -63218999 + L1PA16 LINE L1 6034 6166 0 2056 251 34 13 chr20 3449013 3449453 -63218552 + L1M4 LINE L1 2346 2808 -3338 1545 160 21 46 chr20 3449453 3449734 -63218271 - AluJo SINE Alu -26 286 13 2056 251 34 13 chr20 3449734 3450001 -63218004 + L1M4 LINE L1 2808 3068 -3078 29644 89 13 16 chr20 3450001 3455738 -63212267 + L1PA7 LINE L1 736 6469 0 1808 242 115 38 chr20 3455705 3455745 -63212260 + L1ME2 LINE L1 5595 5631 -1018 * 2256 93 3 0 chr20 3455745 3456035 -63211970 + AluSg1 SINE Alu 1 291 -18 2090 132 84 3 chr20 3456035 3456390 -63211615 + L1PA15 LINE L1 5777 6160 -5 1808 242 115 38 chr20 3456390 3456468 -63211537 + L1ME2 LINE L1 5631 5702 -947 1846 179 3 7 chr20 3456468 3456770 -63211235 - AluJb SINE Alu -11 301 1 1808 242 115 38 chr20 3456770 3457475 -63210530 + L1ME2 LINE L1 5702 6645 -4 480 298 121 27 chr20 3457502 3457834 -63210171 + L1M4 LINE L1 2131 2493 -3653 198 80 60 0 chr20 3457874 3457924 -63210081 + (TA)n Simple_repeat Simple_repeat 1 53 0 1963 119 0 58 chr20 3457925 3458236 -63209769 - AluSg SINE Alu -17 293 1 588 288 49 18 chr20 3458883 3459304 -63208701 + L1MC4a LINE L1 5472 5904 -1904 234 0 0 0 chr20 3459454 3459480 -63208525 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1188 164 4 44 chr20 3459580 3459806 -63208199 + AluJo SINE Alu 85 301 -11 508 250 190 33 chr20 3460294 3460426 -63207579 - LTR16A LTR ERVL -103 347 237 2543 51 0 0 chr20 3460426 3460718 -63207287 - AluY SINE Alu -19 292 1 508 250 190 33 chr20 3460718 3460885 -63207120 - LTR16A LTR ERVL -213 237 1 1232 283 50 6 chr20 3461001 3461362 -63206643 + MLT1J LTR MaLR 43 419 -92 224 163 0 20 chr20 3461432 3461481 -63206524 + (TA)n Simple_repeat Simple_repeat 1 48 0 568 185 8 46 chr20 3461481 3461611 -63206394 - FLAM_C SINE Alu -16 127 3 245 164 36 0 chr20 3461637 3461692 -63206313 - MLT1L LTR MaLR -414 201 145 795 301 158 12 chr20 3461738 3462300 -63205705 - L2 LINE L2 -2203 1111 468 913 207 143 45 chr20 3462345 3462611 -63205394 + AluJo SINE Alu 2 293 -19 48 60 0 0 chr20 3462790 3462873 -63205132 + AT_rich Low_complexity Low_complexity 1 83 0 351 0 0 0 chr20 3463245 3463284 -63204721 + (CA)n Simple_repeat Simple_repeat 2 40 0 2220 101 7 0 chr20 3463290 3463586 -63204419 - AluSq SINE Alu -15 298 1 4534 168 54 89 chr20 3463783 3463852 -63204153 - Charlie1 DNA MER1_type 0 2761 2691 2137 98 0 7 chr20 3463852 3464167 -63203838 - AluSx SINE Alu 0 313 1 4534 168 54 89 chr20 3464167 3465169 -63202836 - Charlie1 DNA MER1_type -70 2691 1656 3150 47 0 0 chr20 3465169 3465553 -63202452 - L1PA5 LINE L1 -1 6153 5770 4534 168 54 89 chr20 3465553 3465611 -63202394 - Charlie1 DNA MER1_type -1105 1656 1598 1391 6 0 12 chr20 3465611 3465774 -63202231 - L1PA2 LINE L1 0 6155 5995 4534 168 54 89 chr20 3465774 3466147 -63201858 - Charlie1 DNA MER1_type -1163 1598 1 411 288 61 58 chr20 3466183 3466478 -63201527 + L2 LINE L2 2369 2664 -650 341 308 221 13 chr20 3466454 3466762 -63201243 + L2 LINE L2 2809 3180 -133 * 242 292 79 63 chr20 3466823 3467138 -63200867 - L2 LINE L2 -1389 1925 1606 245 342 108 9 chr20 3467644 3467755 -63200250 + L2 LINE L2 3151 3272 0 207 257 36 67 chr20 3468136 3468282 -63199723 + MIR SINE MIR 47 186 -66 192 77 0 0 chr20 3468425 3468451 -63199554 + (TG)n Simple_repeat Simple_repeat 1 26 0 2775 7 0 0 chr20 3468733 3469033 -63198972 - AluY SINE Alu -11 300 1 2018 171 12 0 chr20 3469050 3469394 -63198611 - MER7A DNA MER2_type 0 346 1 180 275 0 0 chr20 3469930 3469970 -63198035 - MIR SINE MIR -5 257 218 402 176 0 37 chr20 3470197 3470305 -63197700 + C-rich Low_complexity Low_complexity 4 107 0 1716 136 0 43 chr20 3470315 3470595 -63197410 - AluJo SINE Alu -44 268 1 861 250 98 47 chr20 3470713 3471009 -63196996 + L2 LINE L2 3003 3313 0 2222 109 0 10 chr20 3471096 3471398 -63196607 + AluSx SINE Alu 1 299 -13 1752 159 0 66 chr20 3471407 3471740 -63196265 + AluJb SINE Alu 1 311 -1 275 300 79 14 chr20 3471953 3472093 -63195912 - L1ME LINE L1 -418 5752 5604 243 0 0 0 chr20 3472153 3472180 -63195825 + (TGG)n Simple_repeat Simple_repeat 3 29 0 404 336 59 42 chr20 3472195 3472481 -63195524 + L1ME LINE L1 5339 5629 -492 26 0 0 0 chr20 3472716 3472742 -63195263 + AT_rich Low_complexity Low_complexity 1 26 0 2171 109 17 7 chr20 3472745 3473047 -63194958 + AluSq SINE Alu 5 309 -4 392 297 146 21 chr20 3473611 3473803 -63194202 - MIR SINE MIR 0 262 47 2313 100 0 3 chr20 3474046 3474347 -63193658 - AluSg SINE Alu -10 300 1 1153 199 101 38 chr20 3475887 3475975 -63192030 - MER2 DNA MER2_type -8 337 256 2287 99 3 3 chr20 3475975 3476277 -63191728 + AluSx SINE Alu 1 302 -10 1153 199 101 38 chr20 3476277 3476505 -63191500 - MER2 DNA MER2_type -89 256 1 243 253 46 0 chr20 3477036 3477123 -63190882 - L1ME4a LINE L1 -43 6078 5988 21 36 0 0 chr20 3477274 3477302 -63190703 + AT_rich Low_complexity Low_complexity 1 28 0 1581 147 0 0 chr20 3477702 3477927 -63190078 + AluSq SINE Alu 1 225 -88 828 173 0 32 chr20 3477927 3478112 -63189893 - L1P LINE L1 -1290 4856 4678 455 266 18 0 chr20 3478544 3478657 -63189348 + L2 LINE L2 769 883 -2431 1191 218 62 87 chr20 3478658 3478865 -63189140 + LTR16A1 LTR ERVL 1 212 -245 449 206 124 0 chr20 3478865 3478962 -63189043 - MER81 DNA DNA -4 110 2 1191 218 62 87 chr20 3478962 3479223 -63188782 + LTR16A1 LTR ERVL 212 457 0 212 286 91 13 chr20 3479226 3479303 -63188702 + L2 LINE L2 880 962 -2352 552 306 43 14 chr20 3479310 3479519 -63188486 + L2 LINE L2 1290 1504 -1810 517 220 61 0 chr20 3479523 3479655 -63188350 + MER3 DNA MER1_type 1 140 -69 1958 238 97 21 chr20 3479657 3480189 -63187816 + L2 LINE L2 1931 2516 -798 1801 224 125 68 chr20 3480189 3480747 -63187258 - MLT1E LTR MaLR -2 591 2 1958 238 97 21 chr20 3480747 3480820 -63187185 + L2 LINE L2 2516 2582 -732 475 350 132 20 chr20 3481058 3481697 -63186308 + L2 LINE L2 2583 3310 -3 2298 71 4 0 chr20 3481962 3482290 -63185715 - AluY SINE Alu 0 329 1 2648 19 6 10 chr20 3482647 3482959 -63185046 - AluY SINE Alu 0 311 1 1612 214 90 38 chr20 3484937 3485516 -63182489 + HAL1b LINE L1 351 959 -389 335 241 91 70 chr20 3485899 3486098 -63181907 - L1ME4a LINE L1 -276 5886 5684 413 193 67 47 chr20 3486254 3486404 -63181601 + HAL1b LINE L1 1196 1348 0 359 172 32 11 chr20 3487694 3487787 -63180218 - L1MB3 LINE L1 -2 6181 6087 2496 111 31 7 chr20 3487795 3488220 -63179785 - L1MA4 LINE L1 -282 6018 5584 2223 78 0 7 chr20 3488697 3489007 -63178998 + AluSx SINE Alu 3 310 0 24 0 0 0 chr20 3489127 3489151 -63178854 + AT_rich Low_complexity Low_complexity 1 24 0 1733 158 14 7 chr20 3489391 3489682 -63178323 - AluJo SINE Alu -19 293 1 1178 202 20 4 chr20 3491513 3491761 -63176244 - L1MB3 LINE L1 0 6183 5932 355 322 40 7 chr20 3491973 3492122 -63175883 - L2 LINE L2 -220 3052 2899 2273 88 0 0 chr20 3492440 3492723 -63175282 + AluY SINE Alu 1 283 -28 1940 103 9 94 chr20 3493142 3493483 -63174522 + AluSx SINE Alu 1 312 0 2161 110 7 10 chr20 3494278 3494587 -63173418 + AluSx SINE Alu 1 308 -4 238 239 90 45 chr20 3494921 3494988 -63173017 + L2 LINE L2 3185 3254 -18 2360 75 7 7 chr20 3495665 3495970 -63172035 + AluY SINE Alu 1 305 -6 1111 126 0 6 chr20 3496018 3496177 -63171828 + FRAM SINE Alu 1 154 -22 3060 196 7 13 chr20 3496215 3496818 -63171187 + MER82 DNA MER2_type 33 631 -22 2506 125 101 9 chr20 3496835 3497290 -63170715 - Tigger3(Golem) DNA MER2_type -2 3027 2531 255 240 0 0 chr20 3497294 3497344 -63170661 - Tigger3(Golem) DNA MER2_type -2969 60 11 2034 158 0 0 chr20 3497445 3497742 -63170263 + AluJo SINE Alu 1 297 -15 815 237 118 17 chr20 3497746 3498101 -63169904 - L1MC5 LINE L1 -311 7650 7260 * 884 210 29 147 chr20 3498087 3498564 -63169441 - L1MC5 LINE L1 -914 7047 6627 1784 211 41 41 chr20 3498671 3498863 -63169142 - L1MC5 LINE L1 -1907 5901 5710 860 48 112 0 chr20 3498863 3498988 -63169017 - MER85 DNA T2_type 0 139 1 1784 211 41 41 chr20 3498988 3499358 -63168647 - L1MC5 LINE L1 -2097 5711 5339 379 367 77 17 chr20 3499380 3499729 -63168276 - L1MC5 LINE L1 -890 5256 4887 26 0 0 0 chr20 3499867 3499893 -63168112 + AT_rich Low_complexity Low_complexity 1 26 0 962 128 0 0 chr20 3500192 3500325 -63167680 + FLAM_A SINE Alu 1 133 0 675 173 8 23 chr20 3500899 3501032 -63166973 + MER3 DNA MER1_type 1 131 -78 185 0 0 39 chr20 3501032 3501058 -63166947 + (TTTAA)n Simple_repeat Simple_repeat 1 25 0 1639 131 123 0 chr20 3501392 3501694 -63166311 - AluSx SINE Alu 0 333 1 1864 144 10 20 chr20 3501886 3502184 -63165821 + AluJb SINE Alu 1 295 -17 2233 102 0 20 chr20 3502613 3502918 -63165087 - AluSg SINE Alu -11 299 1 260 270 0 24 chr20 3504135 3504230 -63163775 - MIR3 SINE MIR -3 205 113 585 76 0 0 chr20 3504326 3504405 -63163600 + (TCTA)n Simple_repeat Simple_repeat 4 82 0 2366 112 0 0 chr20 3506860 3507172 -63160833 + AluSx SINE Alu 1 312 0 1846 140 3 37 chr20 3508616 3508916 -63159089 + AluJo SINE Alu 1 290 -22 1062 150 155 19 chr20 3509145 3509352 -63158653 - MER46A DNA MER2_type -1 235 1 819 154 0 37 chr20 3509614 3509750 -63158255 + FLAM_C SINE Alu 1 131 -2 210 235 0 0 chr20 3510349 3510400 -63157605 + A-rich Low_complexity Low_complexity 4 54 0 233 226 19 0 chr20 3511125 3511178 -63156827 + MER112 DNA MER1_type 195 248 -12 2385 100 0 3 chr20 3511183 3511493 -63156512 + AluSc SINE Alu 1 309 0 324 353 0 0 chr20 3511990 3512106 -63155899 + MIR3 SINE MIR 84 199 -9 324 272 50 56 chr20 3512930 3513110 -63154895 + L1ME4a LINE L1 5181 5359 -787 3238 162 109 50 chr20 3513307 3514102 -63153903 + L1MB7 LINE L1 5195 6033 -151 612 188 187 26 chr20 3514130 3514319 -63153686 + L1MB8 LINE L1 5845 6050 -120 572 171 130 41 chr20 3514319 3514465 -63153540 + L1MB8 LINE L1 5845 6003 -175 3772 199 40 20 chr20 3514478 3515479 -63152526 - L1M4 LINE L1 -609 5575 4549 1843 134 3 11 chr20 3515479 3515804 -63152201 - AluJb SINE Alu 0 323 1 3772 199 40 20 chr20 3515804 3515909 -63152096 - L1M4 LINE L1 -1635 4549 4448 2464 221 54 40 chr20 3515901 3516628 -63151377 - L1M4 LINE L1 -2049 4097 3358 * 2215 86 3 58 chr20 3516628 3516954 -63151051 - AluSc SINE Alu -1 308 1 2464 221 54 40 chr20 3516954 3516972 -63151033 - L1M4 LINE L1 -2788 3358 3342 2273 99 0 3 chr20 3517613 3517907 -63150098 - AluSq SINE Alu -20 293 1 261 196 0 0 chr20 3518088 3518139 -63149866 - MER91B DNA MER1_type -138 52 2 319 281 141 22 chr20 3518211 3518396 -63149609 + L1ME4a LINE L1 5670 5876 -245 318 239 96 0 chr20 3518444 3518569 -63149436 + L1ME4a LINE L1 1200 6040 -7 2342 214 98 26 chr20 3519092 3519733 -63148272 - MER76 LTR ERV -1 687 1 2437 97 0 0 chr20 3519774 3520084 -63147921 + AluSx SINE Alu 1 310 -2 215 203 270 0 chr20 3520711 3520785 -63147220 - MIR SINE MIR -90 118 25 664 280 129 4 chr20 3521015 3521240 -63146765 - MIR SINE MIR -1 261 9 186 286 14 29 chr20 3521265 3521335 -63146670 - MIR SINE MIR -193 69 1 251 197 106 15 chr20 3521772 3521838 -63146167 + L2 LINE L2 3241 3312 -1 1104 218 68 12 chr20 3524727 3525143 -63142862 + L1ME LINE L1 5028 5462 -704 977 190 23 36 chr20 3525150 3525371 -63142634 - Charlie1 DNA MER1_type -284 2477 2260 284 331 11 56 chr20 3525744 3525922 -63142083 + Charlie7 DNA MER1_type 24 193 -2419 2130 278 145 35 chr20 3526116 3527191 -63140814 + Charlie7 DNA MER1_type 483 1676 -936 1322 198 8 4 chr20 3527191 3527428 -63140577 - MER8 DNA MER2_type -1 238 1 1065 223 193 18 chr20 3527428 3527856 -63140149 + Charlie7 DNA MER1_type 1675 2178 -434 711 235 87 32 chr20 3527888 3528233 -63139772 + Charlie7 DNA MER1_type 2221 2584 -28 739 234 46 46 chr20 3528733 3528930 -63139075 + MIR SINE MIR 3 199 -63 1730 185 0 16 chr20 3529237 3529550 -63138455 + AluJo SINE Alu 1 308 -4 493 275 32 50 chr20 3529590 3529703 -63138302 + MIR SINE MIR 49 158 -104 2279 109 0 3 chr20 3529703 3530006 -63137999 + AluSx SINE Alu 1 302 -10 493 275 32 50 chr20 3530006 3530110 -63137895 + MIR SINE MIR 158 262 0 2410 93 10 0 chr20 3530340 3530650 -63137355 + AluSq SINE Alu 1 313 0 2499 75 7 0 chr20 3531136 3531444 -63136561 - AluSp SINE Alu -3 310 1 639 282 110 18 chr20 3531457 3531684 -63136321 + MIR SINE MIR 15 262 0 6169 67 16 2 chr20 3532795 3533582 -63134423 + L1PA11 LINE L1 5375 6172 -2 766 271 74 23 chr20 3534325 3534756 -63133249 - L1M4 LINE L1 -2324 3822 3370 6648 137 39 17 chr20 3534761 3536341 -63131664 - L1MA4 LINE L1 0 6300 4667 2207 135 0 0 chr20 3536341 3536653 -63131352 + AluSq SINE Alu 1 312 -1 6648 137 39 17 chr20 3536653 3537197 -63130808 - L1MA4 LINE L1 -1633 4667 4136 2694 149 43 17 chr20 3537267 3537360 -63130645 + L1MB4 LINE L1 5685 5774 -406 369 62 0 0 chr20 3537360 3537408 -63130597 + (TG)n Simple_repeat Simple_repeat 2 49 0 2694 149 43 17 chr20 3537408 3537797 -63130208 + L1MB4 LINE L1 5774 6180 0 1009 193 16 44 chr20 3537822 3538071 -63129934 + L1MD2 LINE L1 4616 4857 -1289 780 192 8 0 chr20 3538080 3538210 -63129795 - FLAM_A SINE Alu -6 136 6 1914 137 0 70 chr20 3538224 3538552 -63129453 - AluJb SINE Alu -7 305 1 3547 182 18 39 chr20 3538554 3539116 -63128889 + L1MD2 LINE L1 4849 5376 -983 2083 125 10 10 chr20 3539116 3539413 -63128592 + AluSx SINE Alu 1 297 -15 3547 182 18 39 chr20 3539413 3539981 -63128024 + L1MD2 LINE L1 5376 5954 -405 497 137 21 42 chr20 3540009 3540104 -63127901 - MLT1E1 LTR MaLR -341 313 221 394 216 45 0 chr20 3540092 3540180 -63127825 - MLT1E1 LTR MaLR -558 96 5 * 21 0 0 0 chr20 3540362 3540383 -63127622 + AT_rich Low_complexity Low_complexity 1 21 0 2235 161 92 14 chr20 3542282 3542717 -63125288 - L1MB7 LINE L1 -8 6176 5708 1765 145 4 7 chr20 3542825 3543101 -63124904 + AluSx SINE Alu 23 297 -15 1510 122 5 5 chr20 3543200 3543421 -63124584 - AluSg/x SINE Alu 0 310 90 2501 52 7 0 chr20 3543421 3543711 -63124294 + L1PA4 LINE L1 5864 6155 0 541 205 49 44 chr20 3544989 3545194 -63122811 + L1MC5 LINE L1 7723 7928 -33 894 148 0 22 chr20 3545194 3545329 -63122676 + FLAM_C SINE Alu 2 133 0 411 263 73 69 chr20 3545887 3546161 -63121844 + HAL1 LINE L1 2225 2499 -8 191 88 29 0 chr20 3547159 3547193 -63120812 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 202 261 0 0 chr20 3547713 3547759 -63120246 + C-rich Low_complexity Low_complexity 3 48 0 414 0 0 0 chr20 3547876 3547922 -63120083 + (TTTTG)n Simple_repeat Simple_repeat 1 46 0 1904 128 11 7 chr20 3547926 3548200 -63119805 - AluSx SINE Alu -37 275 1 1588 63 72 36 chr20 3548534 3548755 -63119250 - MER30 DNA MER1_type 0 230 2 284 246 14 0 chr20 3549022 3549091 -63118914 - MER46C DNA MER2_type 0 338 269 374 243 37 47 chr20 3549580 3549687 -63118318 - L2 LINE L2 0 3313 3208 535 251 38 66 chr20 3551410 3551593 -63116412 + MER104 DNA MER2_type 2 179 -1 1761 237 97 97 chr20 3552697 3553606 -63114399 - HAL1 LINE L1 0 2507 1596 2097 139 0 0 chr20 3553606 3553908 -63114097 + AluJb SINE Alu 1 302 -10 1761 237 97 97 chr20 3553908 3554053 -63113952 - HAL1 LINE L1 -910 1597 1453 321 225 0 25 chr20 3554067 3554147 -63113858 - L1ME3A LINE L1 -12 6158 6081 376 258 33 53 chr20 3554281 3554432 -63113573 - L1ME3A LINE L1 -104 6066 5919 2301 100 0 13 chr20 3554434 3554743 -63113262 - AluSx SINE Alu -7 305 1 1020 241 109 68 chr20 3554758 3554861 -63113144 + L1M4 LINE L1 2902 2999 -3147 889 171 114 0 chr20 3554861 3555019 -63112986 + MER5B DNA MER1_type 3 178 0 1020 241 109 68 chr20 3555019 3555530 -63112475 + L1M4 LINE L1 2999 3541 -2605 2470 65 0 0 chr20 3555547 3555840 -63112165 + AluY SINE Alu 1 293 -18 417 247 72 46 chr20 3555849 3556043 -63111962 + L1M4 LINE L1 3891 4089 -2057 1408 171 57 0 chr20 3556043 3556271 -63111734 + Tigger7 DNA MER2_type 25 265 -468 524 185 11 0 chr20 3556272 3556364 -63111641 + Tigger7 DNA MER2_type 2394 2486 -5 295 267 67 30 chr20 3556984 3557119 -63110886 + L2 LINE L2 2849 2988 -284 2384 221 58 45 chr20 3557139 3557848 -63110157 - MER21B LTR ERV1 -83 780 63 326 305 109 6 chr20 3557889 3558063 -63109942 + L2 LINE L2 3109 3300 -13 1876 146 16 25 chr20 3558591 3558906 -63109099 - AluJo SINE Alu 0 312 1 795 284 75 19 chr20 3559557 3559877 -63108128 + L2 LINE L2 2070 2407 -907 912 273 163 28 chr20 3559877 3560492 -63107513 + L2 LINE L2 2581 3275 -38 1812 110 46 19 chr20 3560536 3560799 -63107206 + AluSx SINE Alu 21 290 -22 2740 94 46 23 chr20 3562626 3563052 -63104953 + L1PB1 LINE L1 5742 6176 0 22 0 0 0 chr20 3563464 3563486 -63104519 + AT_rich Low_complexity Low_complexity 1 22 0 28 48 0 0 chr20 3563568 3563610 -63104395 + AT_rich Low_complexity Low_complexity 1 42 0 630 298 69 17 chr20 3564232 3564480 -63103525 - MIR SINE MIR 0 262 3 485 309 71 7 chr20 3565330 3565529 -63102476 - MIR SINE MIR -44 218 12 350 289 171 30 chr20 3565723 3565772 -63102233 - L1MC5 LINE L1 -187 7774 7733 3729 84 4 6 chr20 3565772 3566269 -63101736 - L1PA8 LINE L1 0 6172 5677 350 289 171 30 chr20 3566269 3566482 -63101523 - L1MC5 LINE L1 -228 7733 7475 2006 122 7 0 chr20 3566903 3567209 -63100796 - AluSx SINE Alu 0 308 1 944 275 95 49 chr20 3567519 3568292 -63099713 + L1MEd LINE L1 563 1300 -5010 3599 170 28 6 chr20 3568292 3568944 -63099061 + L1MB3 LINE L1 5511 6176 -7 944 275 95 49 chr20 3568944 3568965 -63099040 + L1MEd LINE L1 1300 1319 -4991 2268 114 0 0 chr20 3568965 3569272 -63098733 + AluSx SINE Alu 1 307 -5 944 275 95 49 chr20 3569272 3569525 -63098480 + L1MEd LINE L1 1319 1661 -4649 1603 282 134 17 chr20 3569671 3570335 -63097670 + L2 LINE L2 1957 2698 -616 487 188 157 13 chr20 3570384 3570615 -63097390 + MLT1E2 LTR MaLR 1 296 -330 895 187 0 0 chr20 3570620 3570775 -63097230 - FRAM SINE Alu -15 161 7 610 159 4 230 chr20 3570780 3571032 -63096973 + MLT1E2 LTR MaLR 410 604 -22 919 116 0 43 chr20 3571041 3571179 -63096826 + FLAM_C SINE Alu 2 133 0 309 313 134 22 chr20 3572549 3572683 -63095322 - L1ME4a LINE L1 -199 5922 5774 499 217 130 7 chr20 3573694 3573832 -63094173 - MIR SINE MIR -16 246 92 483 228 168 60 chr20 3574074 3574306 -63093699 + L1MC4a LINE L1 5914 6170 -1638 22 35 0 0 chr20 3574307 3574336 -63093669 + AT_rich Low_complexity Low_complexity 1 29 0 255 175 0 0 chr20 3575198 3575255 -63092750 + CT-rich Low_complexity Low_complexity 3 59 0 195 100 0 0 chr20 3575256 3575286 -63092719 + (CA)n Simple_repeat Simple_repeat 1 30 0 465 229 106 37 chr20 3579646 3580003 -63088002 + MLT1J2 LTR MaLR 1 450 0 180 0 0 0 chr20 3580223 3580243 -63087762 + (CAA)n Simple_repeat Simple_repeat 2 21 0 243 0 0 0 chr20 3580684 3580711 -63087294 + (A)n Simple_repeat Simple_repeat 1 27 0 307 210 0 17 chr20 3581320 3581402 -63086603 + MLT1J LTR MaLR 247 381 -125 796 263 183 9 chr20 3581487 3581825 -63086180 - L2 LINE L2 -6 3307 2911 697 303 34 4 chr20 3581829 3582067 -63085938 + MER20B DNA MER1_type 202 446 -337 1019 213 88 86 chr20 3583070 3583443 -63084562 - MLT1D LTR MaLR -2 503 127 1885 133 44 0 chr20 3583443 3583736 -63084269 + AluJo SINE Alu 1 306 -6 1019 213 88 86 chr20 3583736 3583841 -63084164 - MLT1D LTR MaLR -378 127 24 1648 168 30 13 chr20 3583965 3584269 -63083736 - AluJo SINE Alu -3 309 1 1489 74 0 5 chr20 3584273 3584491 -63083514 - AluSc SINE Alu 0 308 92 581 278 12 0 chr20 3584491 3584660 -63083345 + MER20B DNA MER1_type 276 446 -337 508 106 0 0 chr20 3584773 3584839 -63083166 - Alu SINE Alu -244 66 1 357 313 134 5 chr20 3585238 3585455 -63082550 + MLT1K LTR MaLR 234 478 -110 2169 111 0 0 chr20 3585517 3585806 -63082199 + AluSx SINE Alu 1 289 -23 727 227 53 13 chr20 3585973 3586198 -63081807 - LTR16A1 LTR ERVL 0 457 224 408 228 24 31 chr20 3586253 3586380 -63081625 - LTR16A1 LTR ERVL -331 126 1 753 158 8 0 chr20 3586485 3586605 -63081400 + FRAM SINE Alu 48 168 -8 230 91 23 45 chr20 3586658 3586702 -63081303 - MLT1J LTR MaLR -378 133 91 250 272 112 32 chr20 3586756 3586881 -63081124 - MIR3 SINE MIR -41 167 33 23 0 0 0 chr20 3588575 3588598 -63079407 + GC_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr20 3588647 3588670 -63079335 + GC_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr20 3591402 3591437 -63076568 + AT_rich Low_complexity Low_complexity 1 35 0 832 126 0 16 chr20 3591437 3591564 -63076441 - FLAM_C SINE Alu -18 125 1 1486 199 70 0 chr20 3591569 3591955 -63076050 - L1MD3 LINE L1 -8 7987 7575 245 150 0 0 chr20 3592020 3592060 -63075945 + Alu SINE Alu 250 289 -13 2091 108 0 17 chr20 3592119 3592130 -63075875 - AluSq SINE Alu -22 291 281 279 0 0 0 chr20 3592130 3592161 -63075844 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2091 108 0 17 chr20 3592161 3592445 -63075560 - AluSq SINE Alu -32 281 1 1496 117 24 12 chr20 3592445 3592693 -63075312 - LTR43 LTR ERV1 -351 251 1 3904 91 31 25 chr20 3592846 3593230 -63074775 - MER41A LTR ERV1 0 554 165 2335 77 24 0 chr20 3593230 3593528 -63074477 - AluSx SINE Alu -7 305 1 3904 91 31 25 chr20 3593528 3593694 -63074311 - MER41A LTR ERV1 -389 165 1 1227 238 122 45 chr20 3594369 3594392 -63073613 + MER74B LTR ERVL 56 76 -546 2376 97 0 0 chr20 3594392 3594702 -63073303 - AluSq SINE Alu -3 310 1 1227 238 122 45 chr20 3594702 3595186 -63072819 + MER74B LTR ERVL 76 602 -20 253 163 0 20 chr20 3595284 3595333 -63072672 + MLT1K LTR MaLR 502 549 0 236 59 59 59 chr20 3595490 3595558 -63072447 + (CCA)n Simple_repeat Simple_repeat 2 69 0 1738 158 7 3 chr20 3595644 3595929 -63072076 - AluJo SINE Alu -21 291 6 191 191 0 0 chr20 3600659 3600701 -63067304 - MIR SINE MIR -89 119 78 341 145 26 53 chr20 3600860 3600936 -63067069 - MIR SINE MIR -74 188 115 218 211 96 19 chr20 3603714 3603766 -63064239 + MIR SINE MIR 195 250 -12 1980 86 7 14 chr20 3604081 3604359 -63063646 - AluSx SINE Alu 0 312 37 371 266 28 7 chr20 3606378 3606511 -63061494 + MIR SINE MIR 50 191 -17 338 224 172 0 chr20 3606661 3606777 -63061228 + MER69 DNA AcHobo 1 136 -1090 210 71 0 0 chr20 3609596 3609624 -63058381 + (CAG)n Simple_repeat Simple_repeat 2 29 0 232 118 0 59 chr20 3609772 3609823 -63058182 + (CCCCCG)n Simple_repeat Simple_repeat 5 52 0 2412 67 0 0 chr20 3610457 3610757 -63057248 - AluSc SINE Alu -9 300 1 2392 82 3 0 chr20 3610780 3611086 -63056919 - AluSp SINE Alu -6 307 1 1497 178 0 48 chr20 3611416 3611660 -63056345 - AluJo SINE Alu -5 307 80 2382 97 0 0 chr20 3611660 3611970 -63056035 + AluSq SINE Alu 1 310 -3 1497 178 0 48 chr20 3611970 3612039 -63055966 - AluJo SINE Alu -232 80 9 327 306 45 13 chr20 3612083 3612099 -63055906 - L1MA10 LINE L1 -2 6332 6317 1438 239 38 23 chr20 3612099 3612542 -63055463 - L1ME2 LINE L1 -9 6155 5706 811 163 2 9 chr20 3612551 3612720 -63055285 - MLT2B2 LTR ERVL -19 535 322 303 312 113 39 chr20 3612910 3613141 -63054864 + L2 LINE L2 2979 3226 -46 369 188 12 0 chr20 3613747 3613827 -63054178 - L1ME2 LINE L1 -533 5637 5557 * 758 219 139 0 chr20 3613823 3614061 -63053944 + L1ME3A LINE L1 5900 6170 0 185 280 120 13 chr20 3614383 3614458 -63053547 - L2 LINE L2 -29 3284 3202 795 283 111 6 chr20 3615451 3615804 -63052201 + MLT1J LTR MaLR 91 480 -31 1071 192 264 5 chr20 3617944 3618372 -63049633 + MLT1H LTR MaLR 11 549 0 260 313 173 6 chr20 3618403 3618476 -63049529 - MIR SINE MIR -7 255 196 2074 144 0 0 chr20 3618476 3618782 -63049223 - AluSx SINE Alu -1 311 6 260 313 173 6 chr20 3618782 3618887 -63049118 - MIR SINE MIR -66 196 47 378 0 0 0 chr20 3621831 3621873 -63046132 + (CA)n Simple_repeat Simple_repeat 2 43 0 243 303 126 8 chr20 3622827 3622946 -63045059 + L2 LINE L2 3180 3312 -1 1931 119 61 0 chr20 3623476 3623754 -63044251 - AluSx SINE Alu -17 295 1 309 26 0 0 chr20 3623777 3623786 -63044219 + (CA)n Simple_repeat Simple_repeat 1 47 0 309 26 0 0 chr20 3623786 3623824 -63044181 + (CA)n Simple_repeat Simple_repeat 2 39 0 683 280 37 5 chr20 3625889 3626078 -63041927 + MER91A DNA MER1_type 2 196 0 1718 156 13 39 chr20 3627351 3627473 -63040532 + AluJo SINE Alu 1 125 -187 2063 113 10 0 chr20 3627473 3627764 -63040241 - AluSx SINE Alu -18 294 1 2398 97 0 0 chr20 3627764 3628074 -63039931 - AluSx SINE Alu -1 311 1 1718 156 13 39 chr20 3628074 3628258 -63039747 + AluJo SINE Alu 123 300 -12 2334 90 0 6 chr20 3628344 3628655 -63039350 - AluSc SINE Alu 0 309 1 180 370 65 0 chr20 3629461 3629553 -63038452 - MIR SINE MIR -43 219 122 1369 270 107 29 chr20 3629553 3629960 -63038045 + L1MC4 LINE L1 7332 7799 -243 2036 121 3 10 chr20 3629960 3630258 -63037747 + AluSx SINE Alu 1 296 -16 1369 270 107 29 chr20 3630258 3630431 -63037574 + L1MC4 LINE L1 7799 7957 -85 392 228 44 15 chr20 3630534 3630670 -63037335 + L1MC4 LINE L1 7903 8042 0 1960 140 0 23 chr20 3632272 3632580 -63035425 - AluJo SINE Alu -11 301 1 326 247 11 142 chr20 3632580 3632644 -63035361 - MIR SINE MIR -18 244 173 2063 142 3 0 chr20 3632644 3632953 -63035052 - AluSx SINE Alu -2 310 1 326 247 11 142 chr20 3632953 3633078 -63034927 - MIR SINE MIR -89 173 80 242 281 31 0 chr20 3633872 3633936 -63034069 + (CTGGGG)n Simple_repeat Simple_repeat 2 67 0 242 172 78 31 chr20 3635342 3635406 -63032599 + L2 LINE L2 2721 2787 -527 187 263 70 61 chr20 3635778 3635892 -63032113 - L2 LINE L2 -2773 541 427 4048 150 45 42 chr20 3636004 3636140 -63031865 + L1MB4 LINE L1 5022 5156 -1024 1655 142 68 14 chr20 3636140 3636421 -63031584 + AluJo SINE Alu 1 296 -16 2258 93 3 10 chr20 3636422 3636724 -63031281 + AluSc SINE Alu 1 300 -9 4048 150 45 42 chr20 3636724 3637727 -63030278 + L1MB4 LINE L1 5155 6172 -8 21 0 0 0 chr20 3638666 3638687 -63029318 + GC_rich Low_complexity Low_complexity 1 21 0 295 329 32 6 chr20 3639530 3639688 -63028317 + (TTGGGG)n Simple_repeat Simple_repeat 2 163 0 * 298 302 35 18 chr20 3639617 3639786 -63028219 + (TTAGGG)n Simple_repeat Simple_repeat 3 174 0 * 380 249 32 76 chr20 3639737 3639922 -63028083 + (TTGGGG)n Simple_repeat Simple_repeat 3 179 0 2214 128 0 0 chr20 3640818 3641130 -63026875 - AluSx SINE Alu 0 312 1 1774 149 6 40 chr20 3641311 3641634 -63026371 - AluJo SINE Alu 0 312 1 238 333 94 38 chr20 3642097 3642256 -63025749 + MLT1H LTR MaLR 112 279 -270 2112 115 0 0 chr20 3642582 3642868 -63025137 + AluSx SINE Alu 1 286 -26 1898 130 6 56 chr20 3642930 3643254 -63024751 - AluJb SINE Alu -2 310 3 219 284 75 0 chr20 3643257 3643324 -63024681 - MIR SINE MIR -112 150 79 777 262 68 17 chr20 3643341 3643635 -63024370 - MLT1J LTR MaLR -15 496 188 893 199 0 0 chr20 3643639 3643795 -63024210 + FRAM SINE Alu 8 163 -13 234 303 220 23 chr20 3643806 3643938 -63024067 - MLT1J LTR MaLR -317 194 37 198 347 84 0 chr20 3644208 3644303 -63023702 + MIR SINE MIR 5 107 -155 1267 67 0 0 chr20 3644863 3645027 -63022978 + AluY SINE Alu 136 299 -12 1937 111 44 0 chr20 3645035 3645305 -63022700 + AluSx SINE Alu 3 284 -28 314 273 81 20 chr20 3645731 3645830 -63022175 + HAL1 LINE L1 799 903 -1604 1677 184 0 16 chr20 3645830 3646134 -63021871 + AluJb SINE Alu 1 299 -13 336 279 225 0 chr20 3646145 3646274 -63021731 - MLT1J LTR MaLR -317 194 37 618 180 0 9 chr20 3646291 3646443 -63021562 + AluSg/x SINE Alu 196 310 0 2076 109 0 35 chr20 3646485 3646797 -63021208 - AluSx SINE Alu -7 305 5 741 221 75 42 chr20 3646800 3647013 -63020992 - MIR SINE MIR -41 221 2 297 75 0 0 chr20 3647015 3647055 -63020950 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 718 174 8 15 chr20 3647067 3647167 -63020838 + AluJo/FLAM SINE Alu 2 102 -200 1645 181 0 17 chr20 3647167 3647454 -63020551 - AluJb SINE Alu -30 282 1 718 174 8 15 chr20 3647454 3647485 -63020520 + AluJo/FLAM SINE Alu 102 132 -170 426 250 167 57 chr20 3647488 3647680 -63020325 + HAL1 LINE L1 908 1120 -1387 236 206 134 21 chr20 3647827 3647924 -63020081 + MLT1L LTR MaLR 383 490 -125 247 293 46 63 chr20 3648604 3648667 -63019338 + HAL1b LINE L1 747 810 -538 2028 119 0 0 chr20 3648667 3648974 -63019031 + AluSg SINE Alu 3 309 0 247 293 46 63 chr20 3648974 3649083 -63018922 + HAL1b LINE L1 810 917 -431 304 388 8 15 chr20 3649185 3649319 -63018686 + HAL1 LINE L1 2228 2360 -147 421 142 0 43 chr20 3649319 3649586 -63018419 + AluJb SINE Alu 1 312 0 807 192 36 30 chr20 3649968 3650310 -63017695 + Tigger2 DNA MER2_type 1 2707 -11 267 31 0 0 chr20 3650383 3650415 -63017590 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 2154 120 0 0 chr20 3650421 3650721 -63017284 + AluSx SINE Alu 1 300 -12 2094 134 20 64 chr20 3650724 3650879 -63017126 + L1MC2 LINE L1 5182 5342 -1080 1856 122 29 0 chr20 3650879 3651157 -63016848 + AluSx SINE Alu 9 294 -18 2094 134 20 64 chr20 3651157 3651503 -63016502 + L1MC2 LINE L1 5342 5675 -747 1492 171 42 65 chr20 3651504 3651581 -63016424 + AluJo SINE Alu 1 78 -224 2043 130 3 10 chr20 3651581 3651903 -63016102 - AluSx SINE Alu 0 312 1 1492 171 42 65 chr20 3651903 3652134 -63015871 + AluJo SINE Alu 78 302 0 555 141 16 16 chr20 3652143 3652264 -63015741 + GA-rich Low_complexity Low_complexity 4 124 0 2290 143 64 40 chr20 3652279 3652992 -63015013 + L1MC2 LINE L1 5661 6332 -12 812 99 0 0 chr20 3653022 3653133 -63014872 - AluSg/x SINE Alu -14 296 186 1537 111 0 0 chr20 3653133 3653341 -63014664 - AluSx SINE Alu -93 219 12 958 156 6 18 chr20 3653380 3653547 -63014458 + FRAM SINE Alu 1 165 -1 2235 109 3 0 chr20 3653888 3654191 -63013814 + AluSq SINE Alu 1 304 -9 186 43 0 0 chr20 3654220 3654243 -63013762 + (TTTTC)n Simple_repeat Simple_repeat 3 25 0 895 192 0 0 chr20 3654255 3654411 -63013594 - AluJb SINE Alu -21 291 136 2296 90 0 0 chr20 3654417 3654716 -63013289 - AluSg SINE Alu -11 299 1 407 265 24 36 chr20 3655083 3655249 -63012756 + L2 LINE L2 2149 2312 -1002 998 307 28 40 chr20 3655259 3655761 -63012244 - MLT1J LTR MaLR -3 508 13 306 329 21 7 chr20 3656183 3656323 -63011682 + L2 LINE L2 2914 3055 -217 317 258 41 10 chr20 3656904 3657001 -63011004 + MIR SINE MIR 92 191 -71 336 234 0 0 chr20 3657134 3657228 -63010777 + (TG)n Simple_repeat Simple_repeat 1 94 0 221 255 94 34 chr20 3657734 3657883 -63010122 - L2 LINE L2 -533 2781 2624 411 290 0 16 chr20 3658613 3658796 -63009209 + (CA)n Simple_repeat Simple_repeat 1 180 0 222 118 0 0 chr20 3659243 3659277 -63008728 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 1426 171 15 15 chr20 3659277 3659546 -63008459 - AluJo SINE Alu -32 280 12 217 174 0 22 chr20 3660069 3660115 -63007890 + CT-rich Low_complexity Low_complexity 6 50 0 31 92 0 0 chr20 3660237 3660324 -63007681 + GC_rich Low_complexity Low_complexity 1 87 0 1003 125 0 0 chr20 3661687 3661831 -63006174 + AluJb SINE Alu 146 289 -23 2023 150 7 0 chr20 3662394 3662694 -63005311 - AluJb SINE Alu -10 302 1 207 223 0 0 chr20 3662900 3662953 -63005052 - MIR SINE MIR -63 145 93 2315 102 0 0 chr20 3663118 3663422 -63004583 - AluSq SINE Alu -9 304 1 269 200 67 0 chr20 3663516 3663576 -63004429 + L2 LINE L2 3205 3268 -4 1038 214 19 5 chr20 3663626 3663832 -63004173 + MER63A DNA MER1_type 1 209 -1 759 205 96 12 chr20 3664347 3664397 -63003608 - MER5A DNA MER1_type -6 183 139 1932 88 0 104 chr20 3664397 3664763 -63003242 + AluSx SINE Alu 1 333 0 759 205 96 12 chr20 3664763 3664877 -63003128 - MER5A DNA MER1_type -50 139 4 184 219 38 95 chr20 3664946 3665051 -63002954 + L2 LINE L2 1687 1785 -1529 417 177 0 0 chr20 3665063 3665125 -63002880 + AluJ/FRAM SINE Alu 231 292 -20 2255 103 0 0 chr20 3665377 3665678 -63002327 + AluSx SINE Alu 1 301 -11 384 263 163 37 chr20 3665814 3666004 -63002001 + L2 LINE L2 3085 3298 -15 442 256 88 37 chr20 3666008 3666223 -63001782 + L1MC5 LINE L1 7558 7783 -178 198 118 0 0 chr20 3666489 3666523 -63001482 + (TG)n Simple_repeat Simple_repeat 1 34 0 1986 145 0 3 chr20 3669006 3669303 -62998702 + AluSx SINE Alu 1 296 -16 1314 120 0 0 chr20 3670345 3670528 -62997477 - AluSg/x SINE Alu -3 309 127 2123 91 3 42 chr20 3670532 3670841 -62997164 - AluY SINE Alu -14 297 1 1847 131 13 55 chr20 3670841 3671153 -62996852 - AluJo SINE Alu -13 299 1 435 235 149 60 chr20 3671184 3671499 -62996506 - L1ME4a LINE L1 -162 5959 5617 247 208 0 0 chr20 3671532 3671585 -62996420 + A-rich Low_complexity Low_complexity 1 53 0 420 308 202 22 chr20 3672142 3672509 -62995496 + L2 LINE L2 2532 2964 -350 204 333 9 27 chr20 3672897 3673008 -62994997 + G-rich Low_complexity Low_complexity 5 113 0 1027 193 104 73 chr20 3673912 3673956 -62994049 - LTR16A1 LTR ERVL 0 457 416 2584 33 7 0 chr20 3673956 3674258 -62993747 - AluY SINE Alu -7 304 1 1027 193 104 73 chr20 3674258 3674597 -62993408 - LTR16A1 LTR ERVL -41 416 62 412 317 42 24 chr20 3678739 3678906 -62989099 + MIR SINE MIR 82 251 -11 355 257 22 37 chr20 3680545 3680681 -62987324 + MIR3 SINE MIR 10 143 -65 255 318 145 0 chr20 3684354 3684533 -62983472 + L1ME4a LINE L1 5613 5817 -304 198 0 0 0 chr20 3684683 3684705 -62983300 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2184 88 7 3 chr20 3684725 3685019 -62982986 + AluSc SINE Alu 1 295 -14 308 272 68 0 chr20 3685020 3685123 -62982882 + L1ME4a LINE L1 5974 6083 -38 1480 117 14 0 chr20 3685284 3685498 -62982507 - AluSg/x SINE Alu -9 303 87 343 282 188 0 chr20 3685782 3685931 -62982074 - MIR SINE MIR -57 205 29 180 352 63 19 chr20 3686549 3686708 -62981297 - MIR3 SINE MIR -24 184 19 228 111 0 0 chr20 3687610 3687646 -62980359 + (CA)n Simple_repeat Simple_repeat 1 36 0 335 341 16 8 chr20 3688511 3688640 -62979365 + L1MC4a LINE L1 6873 7002 -806 401 296 63 12 chr20 3688703 3688951 -62979054 + L1MC4a LINE L1 7005 7228 -620 2301 108 0 0 chr20 3688987 3689292 -62978713 - AluSq SINE Alu -8 305 1 439 263 33 19 chr20 3689406 3689602 -62978403 + L1MC5 LINE L1 7268 7492 -522 198 0 0 0 chr20 3689614 3689636 -62978369 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 1999 116 48 0 chr20 3689662 3689956 -62978049 + AluSg SINE Alu 1 308 -2 1493 142 124 8 chr20 3690040 3690307 -62977698 - AluJb SINE Alu -13 299 2 633 179 69 58 chr20 3690314 3690487 -62977518 + MER58B DNA MER1_type 167 341 0 2412 80 0 0 chr20 3690631 3690932 -62977073 + AluSx SINE Alu 2 302 -10 2334 63 7 3 chr20 3690932 3691233 -62976772 + AluSp SINE Alu 1 302 -11 328 273 141 16 chr20 3691248 3691369 -62976636 + L1MC5 LINE L1 7609 7744 -217 450 329 136 30 chr20 3692028 3692396 -62975609 + L2 LINE L2 2864 3270 -2 420 279 71 7 chr20 3693014 3693154 -62974851 + MIR SINE MIR 25 173 -89 189 273 0 65 chr20 3694923 3695000 -62973005 - MIR SINE MIR -76 132 61 301 335 47 16 chr20 3696728 3696919 -62971086 + Charlie8 DNA MER1_type 4 200 -2217 1985 105 0 34 chr20 3697118 3697433 -62970572 - AluSx SINE Alu 0 305 1 248 259 111 0 chr20 3697554 3697635 -62970370 - L2 LINE L2 -5 3267 3178 2520 53 0 0 chr20 3698084 3698385 -62969620 + AluY SINE Alu 1 301 -10 804 167 0 36 chr20 3698472 3698610 -62969395 - FLAM_C SINE Alu 0 133 1 1044 168 0 0 chr20 3698708 3698869 -62969136 - FRAM SINE Alu -5 161 1 1391 202 3 63 chr20 3698880 3699197 -62968808 - AluSx SINE Alu -4 298 1 578 231 1 0 chr20 3699199 3699336 -62968669 - L1ME LINE L1 -551 5611 5474 261 0 0 0 chr20 3699474 3699503 -62968502 + (CA)n Simple_repeat Simple_repeat 2 30 0 1463 123 0 5 chr20 3699503 3699723 -62968282 + AluSg/x SINE Alu 91 309 -1 720 223 32 40 chr20 3699726 3699977 -62968028 + L1MC4a LINE L1 5589 5837 -1971 1240 149 0 0 chr20 3699978 3700159 -62967846 - AluSx SINE Alu -131 181 1 928 242 65 87 chr20 3700175 3700610 -62967395 - MLT2B3 LTR ERVL 0 554 128 2280 104 0 0 chr20 3700610 3700918 -62967087 - AluSx SINE Alu -4 308 1 928 242 65 87 chr20 3700918 3700944 -62967061 - MLT2B3 LTR ERVL -426 128 103 1641 171 38 3 chr20 3700945 3701237 -62966768 + AluSx SINE Alu 1 302 -10 232 374 146 0 chr20 3701420 3701543 -62966462 + L2 LINE L2 3132 3272 0 1588 183 0 64 chr20 3701592 3701744 -62966261 + AluJb SINE Alu 1 124 -188 2048 120 10 0 chr20 3701744 3702035 -62965970 + AluSx SINE Alu 3 296 -16 1588 183 0 64 chr20 3702035 3702194 -62965811 + AluJb SINE Alu 124 292 -20 2282 113 0 0 chr20 3702203 3702513 -62965492 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr20 3702513 3702534 -62965471 + AT_rich Low_complexity Low_complexity 1 21 0 701 204 17 28 chr20 3702534 3702717 -62965288 - MLT1E LTR MaLR -381 186 1 25 51 0 0 chr20 3702936 3702975 -62965030 + AT_rich Low_complexity Low_complexity 1 39 0 1269 250 31 34 chr20 3703519 3703871 -62964134 + MLT1E LTR MaLR 243 593 0 2090 133 3 3 chr20 3703914 3704222 -62963783 + AluSx SINE Alu 1 308 -4 246 205 0 162 chr20 3704222 3704339 -62963666 - L1ME LINE L1 -460 5710 5613 2012 119 10 3 chr20 3704340 3704634 -62963371 - AluSq SINE Alu -17 296 1 25 31 0 0 chr20 3705836 3705868 -62962137 + GC_rich Low_complexity Low_complexity 1 32 0 2223 97 13 3 chr20 3707718 3708018 -62959987 + AluSx SINE Alu 7 309 -3 315 0 0 0 chr20 3708073 3708108 -62959897 + (CA)n Simple_repeat Simple_repeat 1 35 0 207 254 68 0 chr20 3709610 3709669 -62958336 + MIR SINE MIR 88 150 -112 2130 111 6 16 chr20 3709742 3710057 -62957948 + AluSx SINE Alu 1 312 0 206 255 235 10 chr20 3710157 3710259 -62957746 + MIR SINE MIR 76 200 -62 243 177 0 0 chr20 3712527 3712589 -62955416 + (CAT)n Simple_repeat Simple_repeat 3 64 0 711 179 0 0 chr20 3712786 3712931 -62955074 + CT-rich Low_complexity Low_complexity 2 146 0 75 45 0 0 chr20 3714140 3714250 -62953755 + GC_rich Low_complexity Low_complexity 1 110 0 221 246 24 24 chr20 3714264 3714390 -62953615 + G-rich Low_complexity Low_complexity 6 131 0 * 243 209 29 43 chr20 3714318 3714457 -62953548 + (CGGG)n Simple_repeat Simple_repeat 4 140 0 544 292 89 30 chr20 3714691 3715061 -62952944 - L1ME4a LINE L1 0 6121 5730 294 271 66 0 chr20 3715120 3715242 -62952763 - L1ME4a LINE L1 -93 6028 5899 570 245 87 25 chr20 3715405 3715509 -62952496 - L2 LINE L2 -1106 2208 2112 2063 115 0 7 chr20 3715509 3715821 -62952184 + AluSx SINE Alu 1 310 0 570 245 87 25 chr20 3715821 3715911 -62952094 - L2 LINE L2 -1202 2112 2001 477 277 133 3 chr20 3715941 3716241 -62951764 - L1ME4a LINE L1 -757 5389 5051 683 183 0 23 chr20 3716367 3716542 -62951463 + CT-rich Low_complexity Low_complexity 2 172 0 180 0 0 0 chr20 3716546 3716566 -62951439 + (TTTCC)n Simple_repeat Simple_repeat 5 24 0 558 202 0 0 chr20 3716885 3716984 -62951021 - AluJo/FRAM SINE Alu -6 306 208 274 146 0 0 chr20 3716985 3717026 -62950979 - AluSp SINE Alu -129 174 134 2100 123 0 3 chr20 3717026 3717327 -62950678 - AluSx SINE Alu -12 300 1 29 0 0 0 chr20 3717327 3717356 -62950649 + AT_rich Low_complexity Low_complexity 1 29 0 * 803 213 7 36 chr20 3717351 3717368 -62950637 + FRAM SINE Alu 1 17 -295 2446 52 0 0 chr20 3717368 3717659 -62950346 + AluY SINE Alu 5 295 -16 803 213 7 36 chr20 3717659 3717836 -62950169 + FRAM SINE Alu 17 176 0 607 131 0 0 chr20 3717852 3717936 -62950069 + AluSg/x SINE Alu 209 292 -18 395 125 219 31 chr20 3717937 3718033 -62949972 - L1MB8 LINE L1 -10 6168 6055 784 81 16 49 chr20 3718033 3718156 -62949849 - AluSg/x SINE Alu -10 299 181 531 61 0 0 chr20 3718197 3718263 -62949742 + Alu SINE Alu 2 67 -243 1813 129 4 0 chr20 3718263 3718526 -62949479 - AluSq SINE Alu -49 264 1 970 102 0 0 chr20 3718526 3718654 -62949351 - AluJb SINE Alu -176 136 9 1563 188 10 0 chr20 3719059 3719357 -62948648 + AluJb SINE Alu 3 303 -9 2171 121 0 0 chr20 3719559 3719865 -62948140 - AluSx SINE Alu -1 311 6 1286 198 0 54 chr20 3719979 3720117 -62947888 - AluJo SINE Alu -11 301 157 2092 109 0 3 chr20 3720117 3720421 -62947584 - AluSg SINE Alu -6 304 2 1286 198 0 54 chr20 3720421 3720595 -62947410 - AluJo SINE Alu -155 157 6 1004 146 99 4 chr20 3720599 3720832 -62947173 + MER33 DNA MER1_type 39 293 -31 2210 93 3 0 chr20 3720832 3721132 -62946873 + AluSx SINE Alu 1 301 -11 292 40 40 20 chr20 3721229 3721279 -62946726 + (TTTTA)n Simple_repeat Simple_repeat 1 51 0 6821 17 1 0 chr20 3721279 3722041 -62945964 - L1PA3 LINE L1 -24 6131 5369 2102 98 7 3 chr20 3722736 3723043 -62944962 + AluSg SINE Alu 1 308 -2 300 261 45 11 chr20 3723463 3723551 -62944454 + MIR SINE MIR 55 145 -117 338 207 0 45 chr20 3723999 3724110 -62943895 + CT-rich Low_complexity Low_complexity 3 108 0 198 0 0 0 chr20 3725972 3725994 -62942011 + (T)n Simple_repeat Simple_repeat 1 22 0 358 266 117 33 chr20 3726375 3726589 -62941416 - Charlie8 DNA MER1_type -2185 232 1 378 0 0 0 chr20 3727141 3727183 -62940822 + (TG)n Simple_repeat Simple_repeat 1 42 0 1256 199 101 38 chr20 3732591 3732679 -62935326 - MER2 DNA MER2_type -8 337 256 2134 101 3 3 chr20 3732679 3732977 -62935028 + AluSx SINE Alu 1 298 -14 1256 199 101 38 chr20 3732977 3733205 -62934800 - MER2 DNA MER2_type -89 256 1 274 231 56 28 chr20 3733736 3733844 -62934161 - L1ME4a LINE L1 -43 6078 5968 21 36 0 0 chr20 3733974 3734002 -62934003 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 3734165 3734188 -62933817 + AT_rich Low_complexity Low_complexity 1 23 0 1515 147 0 0 chr20 3734402 3734627 -62933378 + AluSq SINE Alu 1 225 -88 898 178 0 32 chr20 3734627 3734812 -62933193 - L1P LINE L1 -1290 4856 4678 475 230 35 18 chr20 3735231 3735344 -62932661 + L2 LINE L2 754 868 -2446 1386 218 62 87 chr20 3735358 3735565 -62932440 + LTR16A1 LTR ERVL 1 212 -245 457 206 124 0 chr20 3735565 3735662 -62932343 - MER81 DNA DNA -4 110 2 1386 218 62 87 chr20 3735662 3735923 -62932082 + LTR16A1 LTR ERVL 212 457 0 204 286 91 13 chr20 3735926 3736003 -62932002 + L2 LINE L2 880 962 -2352 555 306 43 14 chr20 3736010 3736219 -62931786 + L2 LINE L2 1290 1504 -1810 563 220 61 0 chr20 3736223 3736355 -62931650 + MER3 DNA MER1_type 1 140 -69 1870 238 88 13 chr20 3736357 3736882 -62931123 + L2 LINE L2 1931 2494 -820 1948 222 126 69 chr20 3736895 3737449 -62930556 - MLT1E LTR MaLR -6 587 2 251 235 0 0 chr20 3737456 3737507 -62930498 + L2 LINE L2 2507 2557 -757 507 345 132 20 chr20 3737760 3738399 -62929606 + L2 LINE L2 2583 3310 -3 2215 71 4 0 chr20 3738664 3739004 -62929001 - AluY SINE Alu 0 341 1 2550 19 7 10 chr20 3739361 3739670 -62928335 - AluY SINE Alu -3 308 1 1830 213 89 39 chr20 3741647 3742234 -62925771 + HAL1b LINE L1 351 966 -382 427 256 81 121 chr20 3742437 3742883 -62925122 - L1ME4a LINE L1 -96 6025 5598 318 259 173 7 chr20 3742809 3742948 -62925057 + HAL1b LINE L1 947 1108 -240 * 461 193 67 47 chr20 3742963 3743113 -62924892 + HAL1b LINE L1 1196 1348 0 373 172 32 11 chr20 3744403 3744496 -62923509 - L1MB3 LINE L1 -2 6181 6087 2693 108 31 7 chr20 3744504 3744929 -62923076 - L1MA4 LINE L1 -282 6018 5584 2138 78 0 7 chr20 3745406 3745716 -62922289 + AluSx SINE Alu 3 310 0 24 0 0 0 chr20 3745836 3745860 -62922145 + AT_rich Low_complexity Low_complexity 1 24 0 1600 161 14 7 chr20 3746100 3746391 -62921614 - AluJo SINE Alu -19 293 1 1227 198 20 4 chr20 3748222 3748470 -62919535 - L1MB3 LINE L1 0 6183 5932 362 302 47 13 chr20 3748682 3748831 -62919174 - L2 LINE L2 -220 3052 2899 2162 92 0 0 chr20 3749149 3749432 -62918573 + AluY SINE Alu 1 283 -28 1809 104 9 95 chr20 3749851 3750188 -62917817 + AluSx SINE Alu 1 308 -4 2075 109 6 10 chr20 3750982 3751293 -62916712 + AluSx SINE Alu 1 310 -2 239 239 90 45 chr20 3751627 3751694 -62916311 + L2 LINE L2 3185 3254 -18 2262 75 7 7 chr20 3752371 3752676 -62915329 + AluY SINE Alu 1 305 -6 1024 133 0 6 chr20 3752724 3752882 -62915123 + FRAM SINE Alu 1 153 -23 3229 206 19 13 chr20 3752898 3753525 -62914480 + MER82 DNA MER2_type 1 631 -22 2710 125 101 9 chr20 3753542 3753997 -62914008 - Tigger3(Golem) DNA MER2_type -2 3027 2531 253 260 0 0 chr20 3754001 3754051 -62913954 - Tigger3(Golem) DNA MER2_type -2969 60 11 1926 155 0 0 chr20 3754152 3754449 -62913556 + AluJo SINE Alu 1 297 -15 956 229 122 17 chr20 3754453 3754807 -62913198 - L1MC5 LINE L1 -311 7650 7260 * 1028 196 27 162 chr20 3754775 3755294 -62912711 - L1MC5 LINE L1 -902 7059 6611 1986 212 41 39 chr20 3755377 3755569 -62912436 - L1MC5 LINE L1 -1907 5901 5711 881 48 112 0 chr20 3755569 3755694 -62912311 - MER85 DNA T2_type 0 139 1 1986 212 41 39 chr20 3755694 3756063 -62911942 - L1MC5 LINE L1 -2097 5711 5339 494 368 84 19 chr20 3756074 3756490 -62911515 - L1MC5 LINE L1 -878 5268 4826 26 0 0 0 chr20 3756572 3756598 -62911407 + AT_rich Low_complexity Low_complexity 1 26 0 958 129 0 0 chr20 3756897 3757029 -62910976 + FLAM_A SINE Alu 1 132 -1 733 173 8 23 chr20 3757603 3757736 -62910269 + MER3 DNA MER1_type 1 131 -78 185 0 0 39 chr20 3757736 3757762 -62910243 + (TTTAA)n Simple_repeat Simple_repeat 1 25 0 1492 139 123 0 chr20 3758096 3758394 -62909611 - AluSx SINE Alu 0 329 1 1773 141 10 20 chr20 3758586 3758884 -62909121 + AluJo SINE Alu 1 295 -17 2123 105 0 20 chr20 3759313 3759619 -62908386 - AluSg SINE Alu -10 300 1 263 270 0 24 chr20 3760836 3760931 -62907074 - MIR3 SINE MIR -3 205 113 687 84 0 0 chr20 3761027 3761122 -62906883 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 187 232 18 54 chr20 3761863 3761919 -62906086 - L2 LINE L2 -2075 1239 1186 2230 119 0 0 chr20 3763577 3763889 -62904116 + AluSx SINE Alu 1 312 0 1753 140 3 37 chr20 3765333 3765633 -62902372 + AluJo SINE Alu 1 290 -22 1080 150 155 19 chr20 3765862 3766069 -62901936 - MER46A DNA MER2_type -1 235 1 822 159 0 36 chr20 3766331 3766469 -62901536 + FLAM_C SINE Alu 1 133 0 210 235 0 0 chr20 3767066 3767117 -62900888 + A-rich Low_complexity Low_complexity 4 54 0 250 226 19 0 chr20 3767842 3767895 -62900110 + MER112 DNA MER1_type 195 248 -12 2247 103 0 3 chr20 3767900 3768210 -62899795 + AluSc SINE Alu 1 309 0 302 362 0 0 chr20 3768707 3768823 -62899182 + MIR3 SINE MIR 84 199 -9 375 276 79 49 chr20 3769647 3769850 -62898155 + L1MB8 LINE L1 5181 5389 -757 3151 164 109 50 chr20 3770024 3770819 -62897186 + L1MB7 LINE L1 5195 6033 -151 605 188 187 26 chr20 3770847 3771036 -62896969 + L1MB8 LINE L1 5845 6050 -120 565 171 130 41 chr20 3771036 3771182 -62896823 + L1MB8 LINE L1 5845 6003 -175 3691 198 40 19 chr20 3771195 3772195 -62895810 - L1M4 LINE L1 -609 5575 4549 1746 134 3 11 chr20 3772195 3772520 -62895485 - AluJb SINE Alu 0 323 1 3691 198 40 19 chr20 3772520 3772625 -62895380 - L1M4 LINE L1 -1635 4549 4448 2368 225 59 29 chr20 3772617 3773349 -62894656 - L1M4 LINE L1 -2049 4097 3344 * 2115 83 3 58 chr20 3773349 3773674 -62894331 - AluSc SINE Alu -2 307 1 2164 99 0 3 chr20 3774333 3774627 -62893378 - AluSq SINE Alu -20 293 1 265 196 0 0 chr20 3774808 3774859 -62893146 - MER91 DNA MER1_type -88 52 2 412 274 137 25 chr20 3774919 3775116 -62892889 + L1ME4a LINE L1 5658 5876 -245 307 236 96 0 chr20 3775164 3775289 -62892716 + L1ME4a LINE L1 1200 6040 -7 2223 212 98 26 chr20 3775812 3776453 -62891552 - MER76 LTR ERV -1 687 1 2318 97 0 0 chr20 3776494 3776804 -62891201 + AluSx SINE Alu 1 310 -2 226 214 243 0 chr20 3777435 3777505 -62890500 - MIR SINE MIR -97 111 25 692 280 129 4 chr20 3777735 3777960 -62890045 - MIR SINE MIR -1 261 9 187 286 14 29 chr20 3777985 3778055 -62889950 - MIR SINE MIR -193 69 1 261 197 106 15 chr20 3778492 3778558 -62889447 + L2 LINE L2 3241 3312 -1 282 29 0 0 chr20 3781431 3781466 -62886539 + (TA)n Simple_repeat Simple_repeat 2 36 0 1023 220 69 12 chr20 3781466 3781878 -62886127 + L1ME3A LINE L1 5032 5462 -704 962 190 23 36 chr20 3781885 3782106 -62885899 - Charlie1 DNA MER1_type -284 2477 2260 286 331 11 56 chr20 3782479 3782657 -62885348 + Charlie7 DNA MER1_type 24 193 -2419 1695 268 158 39 chr20 3782851 3783779 -62884226 + Charlie7 DNA MER1_type 483 1521 -1091 296 227 171 11 chr20 3784699 3784787 -62883218 + MIR SINE MIR 13 114 -148 261 183 97 11 chr20 3784972 3785065 -62882940 - Charlie7 DNA MER1_type -69 2543 2443 440 313 75 0 chr20 3786135 3786295 -62881710 + L1ME3A LINE L1 5477 5648 -514 330 220 35 165 chr20 3786335 3786462 -62881543 + MER112 DNA MER1_type 81 174 -86 378 0 0 0 chr20 3786462 3786504 -62881501 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 330 220 35 165 chr20 3786504 3786576 -62881429 + MER112 DNA MER1_type 174 254 -6 272 309 72 28 chr20 3786601 3786850 -62881155 + L1ME3A LINE L1 5689 5948 -222 2309 80 0 32 chr20 3786911 3787222 -62880783 + AluSg SINE Alu 1 301 -9 464 333 145 43 chr20 3787425 3787824 -62880181 + HAL1 LINE L1 1130 1569 -938 1952 152 29 17 chr20 3787828 3788176 -62879829 - LOR1b LTR ERV1 0 461 110 193 191 0 0 chr20 3791904 3791946 -62876059 - MIR SINE MIR -89 119 78 358 152 16 64 chr20 3792105 3792199 -62875806 - MIR SINE MIR -74 188 102 247 267 91 95 chr20 3792856 3793077 -62874928 + L2 LINE L2 2550 2769 -545 219 88 0 0 chr20 3794380 3794414 -62873591 + (TGGA)n Simple_repeat Simple_repeat 2 35 0 2160 115 0 0 chr20 3795022 3795318 -62872687 + AluSg SINE Alu 1 296 -14 189 190 0 103 chr20 3795598 3795656 -62872349 - MIR SINE MIR -94 168 117 190 264 23 46 chr20 3796082 3796169 -62871836 - MIR SINE MIR -59 149 65 205 250 21 0 chr20 3796315 3796363 -62871642 - L2 LINE L2 -15 3257 3209 4360 196 133 101 chr20 3846853 3847105 -62820900 + L1MDa LINE L1 285 527 -6013 1685 81 0 5 chr20 3847105 3847314 -62820691 - AluSc SINE Alu -14 295 88 4360 196 133 101 chr20 3847314 3848096 -62819909 + L1MDa LINE L1 527 1282 -5258 1449 112 0 0 chr20 3848096 3848283 -62819722 + AluSq SINE Alu 1 187 -126 4360 196 133 101 chr20 3848283 3849950 -62818055 + L1MDa LINE L1 1282 3349 -3191 2215 118 3 0 chr20 3849950 3850239 -62817766 + AluSx SINE Alu 1 290 -22 1789 157 57 23 chr20 3851403 3851570 -62816435 - AluJb SINE Alu -2 310 127 2370 94 7 16 chr20 3851570 3851878 -62816127 - AluSx SINE Alu -7 305 1 1789 157 57 23 chr20 3851878 3852010 -62815995 - AluJb SINE Alu -185 127 1 701 209 62 74 chr20 3852138 3852573 -62815432 + L1MDa LINE L1 3385 3814 -2726 382 257 27 14 chr20 3852637 3852782 -62815223 + L1MDa LINE L1 4420 4560 -1980 1136 89 19 25 chr20 3852886 3853044 -62814961 - AluY SINE Alu -154 157 1 234 0 0 0 chr20 3853495 3853521 -62814484 + (TG)n Simple_repeat Simple_repeat 1 26 0 2176 108 0 0 chr20 3853521 3853799 -62814206 - AluSx SINE Alu -33 279 2 1207 220 186 47 chr20 3854312 3854781 -62813224 - MLT1H LTR MaLR 0 549 16 822 251 40 12 chr20 3858886 3859133 -62808872 + MIR SINE MIR 9 262 0 1379 113 35 15 chr20 3859158 3859361 -62808644 + AluJo SINE Alu 90 296 -16 2202 118 3 0 chr20 3860104 3860400 -62807605 + AluSx SINE Alu 1 297 -15 1095 149 0 39 chr20 3860466 3860647 -62807358 + AluSg/x SINE Alu 119 292 -18 1351 176 112 32 chr20 3860758 3860920 -62807085 - AluJo SINE Alu -8 304 156 2550 62 0 3 chr20 3860920 3861224 -62806781 - AluY SINE Alu -8 303 1 1351 176 112 32 chr20 3861224 3861339 -62806666 - AluJo SINE Alu -156 156 5 2282 105 10 0 chr20 3861351 3861655 -62806350 - AluSx SINE Alu -5 307 1 863 150 0 0 chr20 3862269 3862428 -62805577 + FLAM_C SINE Alu 1 159 0 483 214 23 30 chr20 3862501 3862632 -62805373 - L1MC5 LINE L1 -51 7910 7781 2326 102 3 0 chr20 3862638 3862932 -62805073 - AluSq SINE Alu -18 295 1 478 217 19 0 chr20 3863655 3863761 -62804244 - MIR SINE MIR -25 237 130 1790 183 7 0 chr20 3863909 3864193 -62803812 + AluJo SINE Alu 1 286 -26 252 235 141 0 chr20 3864567 3864652 -62803353 - L2 LINE L2 -6 3307 3211 1581 249 70 50 chr20 3864839 3864913 -62803092 + L1ME3A LINE L1 5483 5554 -616 1665 181 27 51 chr20 3864913 3865002 -62803003 + MLT1A1 LTR MaLR 1 91 -274 2116 131 3 7 chr20 3865002 3865299 -62802706 + AluSx SINE Alu 1 296 -16 1665 181 27 51 chr20 3865299 3865580 -62802425 + MLT1A1 LTR MaLR 91 362 -3 1581 249 70 50 chr20 3865580 3866104 -62801901 + L1ME3A LINE L1 5554 6093 -77 1246 195 80 33 chr20 3866125 3866571 -62801434 - MER89 LTR ERV1 0 559 3 1700 189 3 7 chr20 3866883 3867184 -62800821 + AluJo SINE Alu 1 300 -12 23 0 0 0 chr20 3867218 3867241 -62800764 + AT_rich Low_complexity Low_complexity 1 23 0 1832 172 7 7 chr20 3868113 3868415 -62799590 - AluJo SINE Alu -6 306 5 1163 253 43 16 chr20 3868498 3868849 -62799156 + L1MC4a LINE L1 5560 5923 -1885 1772 100 21 8 chr20 3868849 3869089 -62798916 + AluSc SINE Alu 1 243 -66 1163 253 43 16 chr20 3869089 3869108 -62798897 + L1MC4a LINE L1 5923 5940 -1868 2258 96 3 26 chr20 3869164 3869299 -62798706 + AluSg SINE Alu 1 138 -172 2114 72 14 51 chr20 3869299 3869592 -62798413 + AluY SINE Alu 3 284 -27 216 0 0 0 chr20 3869592 3869616 -62798389 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1173 111 0 6 chr20 3869616 3869792 -62798213 + AluSc SINE Alu 131 305 -4 2149 122 7 0 chr20 3869794 3870089 -62797916 + AluSx SINE Alu 3 299 -13 549 147 76 152 chr20 3870095 3870306 -62797699 + L1MC5 LINE L1 6942 7136 -825 1846 124 3 14 chr20 3870306 3870588 -62797417 + AluSx SINE Alu 1 279 -33 360 0 0 0 chr20 3870588 3870628 -62797377 + (CA)n Simple_repeat Simple_repeat 1 40 0 1612 151 0 25 chr20 3870806 3871085 -62796920 + AluJo SINE Alu 35 306 -6 2172 104 7 0 chr20 3871143 3871440 -62796565 + AluSp SINE Alu 1 299 -14 462 161 129 0 chr20 3871510 3871603 -62796402 - FLAM_A SINE Alu -18 124 20 2260 75 0 30 chr20 3871742 3872047 -62795958 + AluY SINE Alu 1 296 -15 1968 102 46 0 chr20 3872270 3872553 -62795452 - AluSx SINE Alu -16 296 1 2113 89 0 17 chr20 3872742 3873034 -62794971 - AluSg1 SINE Alu -20 289 3 549 110 12 12 chr20 3873038 3873120 -62794885 - AluSg/x SINE Alu -19 290 209 1776 159 7 0 chr20 3873339 3873635 -62794370 + AluJb SINE Alu 1 298 -14 2415 50 0 10 chr20 3873636 3873936 -62794069 + AluY SINE Alu 1 297 -14 1989 109 30 10 chr20 3873944 3874246 -62793759 + AluSx SINE Alu 1 308 -4 2065 89 0 0 chr20 3874385 3874654 -62793351 + AluSp SINE Alu 34 302 -11 263 351 123 9 chr20 3874753 3874777 -62793228 - L2 LINE L2 -449 2865 2845 2485 61 0 6 chr20 3874777 3875089 -62792916 + AluY SINE Alu 2 311 0 263 351 123 9 chr20 3875089 3875292 -62792713 - L2 LINE L2 -469 2845 2612 2536 46 0 0 chr20 3875343 3875648 -62792357 - AluY SINE Alu -4 307 3 1812 138 14 0 chr20 3875698 3875989 -62792016 - AluJb SINE Alu -17 295 1 1858 120 22 0 chr20 3876018 3876326 -62791679 + AluSx SINE Alu 1 314 0 2047 117 3 0 chr20 3876971 3877270 -62790735 - AluSx SINE Alu -12 300 1 2140 202 90 12 chr20 3877413 3877893 -62790112 + MLT1F LTR MaLR 14 530 -12 2371 70 3 0 chr20 3878138 3878440 -62789565 - AluY SINE Alu -8 303 1 34 24 0 0 chr20 3878442 3878483 -62789522 + AT_rich Low_complexity Low_complexity 1 41 0 414 198 119 8 chr20 3878551 3878677 -62789328 - L1ME3A LINE L1 -9 6161 6022 2134 118 0 3 chr20 3878692 3878997 -62789008 - AluSx SINE Alu -8 304 1 25 0 0 0 chr20 3878997 3879022 -62788983 + AT_rich Low_complexity Low_complexity 1 25 0 2065 96 6 25 chr20 3879052 3879366 -62788639 - AluSg SINE Alu -2 308 1 180 315 0 19 chr20 3879413 3879467 -62788538 + MIR SINE MIR 58 110 -98 904 111 131 0 chr20 3879983 3880136 -62787869 - AluSp SINE Alu -8 305 133 1660 149 6 43 chr20 3882788 3883111 -62784894 - AluJo SINE Alu -1 311 1 420 272 194 11 chr20 3883124 3883304 -62784701 - MIR SINE MIR -48 214 2 2057 101 10 26 chr20 3883805 3884112 -62783893 + AluSx SINE Alu 1 302 -10 1458 75 10 10 chr20 3884243 3884443 -62783562 + AluSg/x SINE Alu 98 297 -12 258 311 40 0 chr20 3884602 3884676 -62783329 + MER5A DNA MER1_type 76 152 -37 685 297 48 9 chr20 3884785 3885014 -62782991 - MIR SINE MIR -5 257 20 226 121 379 0 chr20 3885147 3885213 -62782792 - L1ME1 LINE L1 -4 6162 6072 2046 132 7 0 chr20 3885672 3885982 -62782023 - AluSq SINE Alu -1 312 1 2184 97 10 0 chr20 3885991 3886291 -62781714 - AluSp SINE Alu -10 303 1 1121 148 0 0 chr20 3886324 3886500 -62781505 - AluSg/x SINE Alu -6 306 131 1570 160 19 0 chr20 3886760 3887056 -62780949 + AluSx SINE Alu 13 313 0 835 136 0 102 chr20 3887057 3887234 -62780771 + AluJo SINE Alu 124 282 -30 204 40 0 0 chr20 3887236 3887261 -62780744 + (T)n Simple_repeat Simple_repeat 1 25 0 2156 73 0 54 chr20 3887814 3888129 -62779876 - AluY SINE Alu -13 298 1 3494 191 109 19 chr20 3888158 3888940 -62779065 + MER21B LTR ERV1 1 852 -11 1737 150 29 26 chr20 3889170 3889477 -62778528 + AluJb SINE Alu 1 308 -4 1944 118 14 7 chr20 3889478 3889767 -62778238 + AluSx SINE Alu 3 293 -19 343 273 188 13 chr20 3889787 3889941 -62778064 - L1M4 LINE L1 -2207 3939 3759 2047 122 7 0 chr20 3889944 3890247 -62777758 - AluSx SINE Alu -3 309 5 319 251 166 33 chr20 3890269 3890576 -62777429 - L1M4 LINE L1 -3116 3030 2683 2043 113 7 3 chr20 3890624 3890925 -62777080 - AluSg SINE Alu -8 302 1 1909 139 7 3 chr20 3890928 3891222 -62776783 - AluSx SINE Alu -17 295 1 2291 70 10 0 chr20 3891455 3891755 -62776250 - AluY SINE Alu -8 303 1 28 0 0 0 chr20 3892501 3892529 -62775476 + AT_rich Low_complexity Low_complexity 1 28 0 2013 96 0 4 chr20 3892530 3892801 -62775204 - AluSx SINE Alu -22 290 21 1446 163 48 4 chr20 3892805 3893099 -62774906 - AluJo SINE Alu 0 306 1 533 235 161 23 chr20 3893508 3893768 -62774237 - HAL1 LINE L1 -821 1686 1391 959 181 42 28 chr20 3893915 3894130 -62773875 - AluJo SINE Alu -9 303 86 406 133 8 4 chr20 3894131 3894245 -62773760 - AluSg/x SINE Alu -52 248 84 1085 198 0 31 chr20 3894245 3894472 -62773533 - AluJo SINE Alu -92 220 1 305 242 0 21 chr20 3894628 3894653 -62773352 - L1MA10 LINE L1 -1 6333 6309 680 265 78 39 chr20 3894653 3894724 -62773281 - L1ME1 LINE L1 -15 6151 6084 414 0 0 0 chr20 3894724 3894770 -62773235 + (CA)n Simple_repeat Simple_repeat 2 47 0 680 265 78 39 chr20 3894770 3894890 -62773115 - L1ME1 LINE L1 -82 6084 5970 2087 123 0 10 chr20 3894890 3895199 -62772806 - AluSx SINE Alu -6 306 1 1473 121 6 118 chr20 3895205 3895383 -62772622 - AluSc SINE Alu 0 309 187 2094 108 0 3 chr20 3895383 3895678 -62772327 - AluSg SINE Alu -16 294 1 1473 121 6 118 chr20 3895678 3895847 -62772158 - AluSc SINE Alu -122 187 1 680 265 78 39 chr20 3895847 3895979 -62772026 - L1ME1 LINE L1 -200 5966 5807 263 203 105 105 chr20 3895999 3896050 -62771955 - L1MD2 LINE L1 -137 6222 6172 1439 186 47 10 chr20 3896050 3896351 -62771654 + AluJo SINE Alu 1 312 0 263 203 105 105 chr20 3896351 3896432 -62771573 - L1MD2 LINE L1 -186 6173 6090 2355 47 14 3 chr20 3897102 3897398 -62770607 - AluY SINE Alu -12 299 1 2162 91 3 3 chr20 3897469 3897767 -62770238 - AluSx SINE Alu -14 298 1 1414 149 45 128 chr20 3897821 3897894 -62770111 - MER47A DNA MER2_type -1957 366 289 1752 171 10 0 chr20 3897894 3898192 -62769813 + AluJb SINE Alu 1 301 -11 1414 149 45 128 chr20 3898192 3898515 -62769490 - MER47A DNA MER2_type -2034 289 3 2031 118 7 0 chr20 3898557 3898846 -62769159 - AluSc SINE Alu -18 291 1 1920 141 20 3 chr20 3898851 3899150 -62768855 - AluSx SINE Alu -8 304 1 2048 96 44 0 chr20 3900838 3901131 -62766874 - AluSp SINE Alu -7 306 1 905 105 0 0 chr20 3901158 3901282 -62766723 - AluSq/x SINE Alu -188 124 1 300 265 68 77 chr20 3901287 3901344 -62766661 - L1MC4a LINE L1 -1927 5881 5825 2121 100 0 13 chr20 3901344 3901643 -62766362 - AluSg SINE Alu -15 295 1 300 265 68 77 chr20 3901643 3901702 -62766303 - L1MC4a LINE L1 -1983 5825 5766 222 62 0 0 chr20 3902047 3902079 -62765926 + (T)n Simple_repeat Simple_repeat 1 32 0 2227 95 0 3 chr20 3903054 3903350 -62764655 + AluSg SINE Alu 1 295 -15 2146 96 7 0 chr20 3903361 3903654 -62764351 + AluSp SINE Alu 1 295 -18 1918 112 67 0 chr20 3904421 3904706 -62763299 + AluSg SINE Alu 1 304 -6 3828 187 88 60 chr20 3904733 3905100 -62762905 - L1MB7 LINE L1 0 6184 5829 1951 98 35 3 chr20 3905100 3905386 -62762619 - AluSp SINE Alu -18 295 1 3828 187 88 60 chr20 3905386 3905542 -62762463 - L1MB7 LINE L1 -355 5829 5679 2238 84 0 3 chr20 3905542 3905840 -62762165 - AluY SINE Alu -14 297 1 3828 187 88 60 chr20 3905840 3906071 -62761934 - L1MB7 LINE L1 -505 5679 5456 1305 186 61 7 chr20 3906071 3906350 -62761655 - AluJo SINE Alu -18 294 1 1730 147 3 36 chr20 3906355 3906661 -62761344 - AluSx SINE Alu -16 296 1 3828 187 88 60 chr20 3906661 3907047 -62760958 - L1MB7 LINE L1 -731 5453 5079 2391 64 3 0 chr20 3907047 3907344 -62760661 - AluSc SINE Alu -8 301 4 3828 187 88 60 chr20 3907344 3908021 -62759984 - L1MB7 LINE L1 -1105 5079 4308 22 35 0 0 chr20 3909401 3909430 -62758575 + AT_rich Low_complexity Low_complexity 1 29 0 255 328 54 32 chr20 3909742 3909928 -62758077 - L1MC4a LINE L1 -408 5713 5524 1831 149 3 23 chr20 3910652 3910960 -62757045 - AluSx SINE Alu -7 305 4 1994 104 19 35 chr20 3911981 3912297 -62755708 + AluSx SINE Alu 1 311 -1 2220 91 7 0 chr20 3912316 3912613 -62755392 + AluSp SINE Alu 1 299 -14 1734 63 5 0 chr20 3912804 3913026 -62754979 - L1PA5 LINE L1 -1 6153 5931 23 0 0 0 chr20 3913265 3913288 -62754717 + AT_rich Low_complexity Low_complexity 1 23 0 1829 137 13 7 chr20 3913461 3913760 -62754245 - AluSx SINE Alu -11 301 1 352 254 71 40 chr20 3916737 3916863 -62751142 - MIR SINE MIR -110 152 23 1963 109 11 0 chr20 3917001 3917285 -62750720 - AluSx SINE Alu -25 287 1 203 305 49 12 chr20 3917294 3917376 -62750629 + L2 LINE L2 1881 1965 -1349 2056 89 16 20 chr20 3918409 3918713 -62749292 + AluSx SINE Alu 1 303 -9 2332 66 30 0 chr20 3920227 3920529 -62747476 + AluY SINE Alu 1 311 0 2165 97 13 26 chr20 3920596 3920906 -62747099 - AluSx SINE Alu -6 306 1 1132 149 47 42 chr20 3920944 3921159 -62746846 + AluJo SINE Alu 81 296 -16 216 0 0 0 chr20 3924815 3924839 -62743166 + (T)n Simple_repeat Simple_repeat 1 24 0 209 224 20 0 chr20 3924846 3924895 -62743110 + GA-rich Low_complexity Low_complexity 2 51 0 321 286 53 30 chr20 3927510 3927643 -62740362 - MIR3 SINE MIR -32 176 41 224 260 26 52 chr20 3927716 3927793 -62740212 + L2 LINE L2 2565 2639 -675 220 277 92 0 chr20 3928006 3928125 -62739880 + MIR SINE MIR 17 146 -62 213 201 78 0 chr20 3928341 3928399 -62739606 + MIR SINE MIR 107 150 -58 2279 97 0 7 chr20 3928590 3928888 -62739117 - AluSc SINE Alu -13 296 1 4325 172 66 27 chr20 3929185 3930077 -62737928 - L1MB7 LINE L1 -19 6165 5240 434 214 19 10 chr20 3930074 3930177 -62737828 + L1M4 LINE L1 4844 4947 -1199 * 479 133 133 9 chr20 3930230 3930343 -62737662 + L1M4 LINE L1 5108 5234 -912 3710 201 42 38 chr20 3930348 3930493 -62737512 - L1M4 LINE L1 -837 5309 5166 1739 125 16 61 chr20 3930493 3930804 -62737201 - AluJo SINE Alu -15 297 1 3710 201 42 38 chr20 3930804 3930916 -62737089 - L1M4 LINE L1 -980 5166 5056 800 181 8 0 chr20 3930916 3931043 -62736962 - FLAM_A SINE Alu -5 128 1 3710 201 42 38 chr20 3931043 3931711 -62736294 - L1M4 LINE L1 -1090 5056 4379 1927 161 3 0 chr20 3931717 3932009 -62735996 - AluSp SINE Alu -20 293 1 3133 163 76 171 chr20 3932010 3932778 -62735227 + L1MDa LINE L1 1308 2147 -4393 1197 189 26 21 chr20 3932778 3933011 -62734994 - AluJb SINE Alu -15 297 64 3133 163 76 171 chr20 3933011 3933544 -62734461 + L1MDa LINE L1 2147 2729 -3811 2344 109 3 0 chr20 3933544 3933855 -62734150 + AluSx SINE Alu 1 312 0 3133 163 76 171 chr20 3933855 3933925 -62734080 + L1MDa LINE L1 2729 2804 -3736 1926 169 0 0 chr20 3933925 3934220 -62733785 - AluJo SINE Alu -17 295 1 3133 163 76 171 chr20 3934220 3934236 -62733769 + L1MDa LINE L1 2804 2820 -3720 2479 52 0 3 chr20 3934236 3934524 -62733481 - AluY SINE Alu -24 287 1 3133 163 76 171 chr20 3934524 3934570 -62733435 + L1MDa LINE L1 2820 2793 -3747 2153 118 3 0 chr20 3934570 3934866 -62733139 - AluSq SINE Alu -15 298 2 3133 163 76 171 chr20 3934866 3934948 -62733057 + L1MDa LINE L1 2792 2880 -3660 1490 240 12 30 chr20 3934937 3935341 -62732664 + L1M4 LINE L1 4497 4893 -1253 * 2374 102 0 0 chr20 3935679 3935982 -62732023 + AluSx SINE Alu 1 303 -9 21 57 0 0 chr20 3936103 3936138 -62731867 + AT_rich Low_complexity Low_complexity 1 35 0 2389 97 0 0 chr20 3937184 3937484 -62730521 + AluSq SINE Alu 1 300 -13 1786 134 48 4 chr20 3937936 3938232 -62729773 + AluJb SINE Alu 1 308 0 1276 100 45 68 chr20 3938244 3938464 -62729541 + AluJb SINE Alu 87 301 -11 2247 88 3 14 chr20 3938662 3938959 -62729046 + AluSc SINE Alu 1 294 -15 2567 59 3 0 chr20 3939516 3939823 -62728182 + AluSp SINE Alu 1 308 -5 2100 225 50 11 chr20 3940316 3940837 -62727168 - L1ME3 LINE L1 -6 6156 5616 2198 115 0 0 chr20 3940849 3941144 -62726861 + AluSx SINE Alu 1 295 -17 2019 130 10 3 chr20 3941155 3941448 -62726557 + AluJb SINE Alu 1 295 -17 1098 253 42 31 chr20 3941523 3941907 -62726098 - L1ME3 LINE L1 -979 5167 4780 1700 229 22 22 chr20 3941954 3942360 -62725645 + MLT1C LTR MaLR 59 464 -3 2256 169 200 142 chr20 3942394 3942707 -62725298 - L1MC4a LINE L1 -1 7807 7514 2397 80 0 7 chr20 3942707 3943008 -62724997 - AluY SINE Alu -12 299 1 2256 169 200 142 chr20 3943008 3943762 -62724243 - L1MC4a LINE L1 -294 7514 6678 2009 247 184 55 chr20 3943762 3944848 -62723157 - L1ME3 LINE L1 -1369 4777 3552 2279 83 7 7 chr20 3944902 3945203 -62722802 - AluY SINE Alu -10 301 1 1826 109 4 0 chr20 3945212 3945459 -62722546 - AluSg SINE Alu -8 302 55 2351 98 3 0 chr20 3945511 3945807 -62722198 - AluSx SINE Alu -15 297 1 4391 169 56 12 chr20 3945846 3946374 -62721631 - L1MB5 LINE L1 -19 6155 5566 2191 109 17 3 chr20 3946374 3946668 -62721337 + AluSg SINE Alu 1 298 -12 4391 169 56 12 chr20 3946668 3947094 -62720911 - L1MB5 LINE L1 -608 5566 5160 4103 209 24 15 chr20 3947091 3948017 -62719988 - L1MB5 LINE L1 -1201 4945 4012 * 902 210 56 80 chr20 3948040 3948502 -62719503 - L1ME3 LINE L1 -2705 3441 2991 1695 153 55 49 chr20 3948630 3948762 -62719243 + AluJb SINE Alu 1 131 -181 2261 97 7 17 chr20 3948762 3949062 -62718943 + AluSx SINE Alu 1 297 -15 1695 153 55 49 chr20 3949062 3949237 -62718768 + AluJb SINE Alu 131 310 -2 424 329 159 56 chr20 3949589 3950404 -62717601 + L2 LINE L2 1167 2167 -1147 2211 114 3 0 chr20 3950404 3950693 -62717312 - AluSx SINE Alu -22 290 1 424 329 159 56 chr20 3950693 3951176 -62716829 + L2 LINE L2 2167 2599 -715 676 136 10 0 chr20 3951237 3951340 -62716665 - L1MA4 LINE L1 -13 6287 6184 625 208 154 41 chr20 3951351 3951572 -62716433 - HAL1 LINE L1 -1 2506 2261 397 244 33 11 chr20 3951578 3951668 -62716337 - L2 LINE L2 0 3313 3222 2229 90 0 0 chr20 3952139 3952442 -62715563 + AluSc SINE Alu 1 303 0 1905 104 86 7 chr20 3952565 3952844 -62715161 - AluSx SINE Alu -11 301 1 1740 186 17 0 chr20 3952871 3953172 -62714833 + AluJo SINE Alu 1 306 -6 21 57 0 0 chr20 3953445 3953480 -62714525 + AT_rich Low_complexity Low_complexity 1 35 0 1663 180 7 11 chr20 3953822 3954129 -62713876 + AluJb SINE Alu 1 306 0 2046 108 42 0 chr20 3954464 3954750 -62713255 - AluSq SINE Alu -15 298 1 2270 115 0 0 chr20 3954940 3955244 -62712761 - AluSx SINE Alu -8 304 1 290 211 53 66 chr20 3955915 3955991 -62712014 - L2 LINE L2 0 3313 3239 1839 154 27 14 chr20 3956276 3956569 -62711436 - AluJb SINE Alu -15 297 1 194 286 158 45 chr20 3956572 3956705 -62711300 - MIR SINE MIR -113 149 2 2202 125 3 3 chr20 3957603 3957914 -62710091 + AluSx SINE Alu 1 311 -1 260 283 44 96 chr20 3957967 3958192 -62709813 + MIR3 SINE MIR 2 217 -45 342 0 0 0 chr20 3958221 3958259 -62709746 + (TG)n Simple_repeat Simple_repeat 2 39 0 2172 96 51 0 chr20 3959466 3959758 -62708247 + AluSc SINE Alu 2 308 -1 2139 96 17 3 chr20 3959775 3960066 -62707939 + AluSg SINE Alu 1 295 -15 1537 197 7 30 chr20 3960078 3960378 -62707627 + AluJo SINE Alu 1 293 -19 727 248 67 50 chr20 3960722 3960960 -62707045 + MIR SINE MIR 21 262 0 9595 206 101 77 chr20 3961026 3961525 -62706480 + L1MD1 LINE L1 14 500 -6040 1720 77 0 0 chr20 3961525 3961733 -62706272 - AluSc SINE Alu -14 295 88 9595 206 101 77 chr20 3961733 3962515 -62705490 + L1MD1 LINE L1 500 1262 -5278 1425 112 0 0 chr20 3962515 3962702 -62705303 + AluSq SINE Alu 1 187 -126 9595 206 101 77 chr20 3962702 3964370 -62703635 + L1MD1 LINE L1 1262 2889 -3651 2183 100 0 20 chr20 3964370 3964671 -62703334 + AluSx SINE Alu 1 295 -17 2260 117 0 0 chr20 3964672 3964981 -62703024 + AluSq SINE Alu 1 309 -4 9595 206 101 77 chr20 3964981 3967306 -62700699 + L1MD1 LINE L1 2888 5699 -841 813 177 92 61 chr20 3967309 3967622 -62700383 + MLT1C LTR MaLR 2 354 -113 1357 158 0 0 chr20 3967636 3967838 -62700167 - AluSx SINE Alu -110 202 1 694 138 0 18 chr20 3967839 3967948 -62700057 + MLT1C LTR MaLR 354 460 -7 3580 160 21 5 chr20 3967948 3968555 -62699450 + L1MD1 LINE L1 5702 6318 -318 1101 177 25 0 chr20 3968567 3968765 -62699240 + L1MD1 LINE L1 6434 6636 0 360 237 0 92 chr20 3968768 3968899 -62699106 + HAL1 LINE L1 1534 1652 -855 2483 57 3 0 chr20 3969335 3969633 -62698372 + AluY SINE Alu 1 299 -12 553 200 54 8 chr20 3969687 3969817 -62698188 + L1MA4 LINE L1 6010 6145 -155 1941 99 122 0 chr20 3969824 3970087 -62697918 - AluSg SINE Alu -5 295 1 896 128 89 6 chr20 3970108 3970288 -62697717 + L1MA4 LINE L1 6102 6296 -4 413 260 87 43 chr20 3970300 3970531 -62697474 + L1M4 LINE L1 2200 2440 -3706 2096 95 50 0 chr20 3970575 3970858 -62697147 + AluSx SINE Alu 1 297 -15 24 0 0 0 chr20 3970866 3970890 -62697115 + AT_rich Low_complexity Low_complexity 1 24 0 2123 107 3 17 chr20 3971140 3971430 -62696575 + AluSq SINE Alu 1 286 -27 397 167 0 0 chr20 3971370 3971430 -62696575 + AluSp/q SINE Alu 227 315 0 222 0 35 0 chr20 3971430 3971459 -62696546 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 343 256 79 24 chr20 3971629 3971793 -62696212 + L1M4 LINE L1 3027 3199 -2947 446 198 0 0 chr20 3972025 3972106 -62695899 - Tigger7 DNA MER2_type 0 2587 2507 1312 189 67 20 chr20 3972113 3972367 -62695638 - Tigger7 DNA MER2_type -284 266 1 647 243 92 23 chr20 3972463 3972681 -62695324 + Charlie8 DNA MER1_type 1 233 -2184 225 284 169 0 chr20 3973079 3973227 -62694778 - L1P LINE L1 -1092 5054 4882 1365 98 0 11 chr20 3973256 3973440 -62694565 - AluSc SINE Alu -10 299 118 1636 163 42 0 chr20 3973588 3973852 -62694153 + AluJb SINE Alu 1 275 -37 288 0 0 0 chr20 3973855 3973887 -62694118 + (TC)n Simple_repeat Simple_repeat 1 32 0 376 286 63 35 chr20 3973896 3973968 -62694037 - L1M4 LINE L1 -1524 4622 4554 1327 182 81 86 chr20 3973968 3974047 -62693958 + MSTD LTR MaLR 1 79 -317 2380 86 0 10 chr20 3974047 3974348 -62693657 + AluSg SINE Alu 1 298 -12 1614 188 3 24 chr20 3974356 3974654 -62693351 + AluJb SINE Alu 1 292 -20 1327 182 81 86 chr20 3974654 3974960 -62693045 + MSTD LTR MaLR 86 393 -3 376 286 63 35 chr20 3974960 3975205 -62692800 - L1M4 LINE L1 -1592 4554 4296 2478 94 0 0 chr20 3975410 3975717 -62692288 + AluSx SINE Alu 1 307 -5 1399 183 102 25 chr20 3975730 3976014 -62691991 + AluJo SINE Alu 3 308 -4 183 42 0 0 chr20 3976792 3976816 -62691189 + (CAA)n Simple_repeat Simple_repeat 2 25 0 618 220 0 0 chr20 3977017 3977135 -62690870 - FLAM_A SINE Alu -11 122 5 1618 74 34 176 chr20 3977451 3977804 -62690201 - AluSp SINE Alu 0 303 1 313 160 0 27 chr20 3977956 3978031 -62689974 + CT-rich Low_complexity Low_complexity 4 76 0 1786 146 4 18 chr20 3978032 3978307 -62689698 - AluJb SINE Alu -40 272 2 1838 113 0 16 chr20 3978401 3978657 -62689348 - AluSc SINE Alu -14 295 44 821 193 12 36 chr20 3978657 3978823 -62689182 - FRAM SINE Alu -14 162 1 27 0 0 0 chr20 3979756 3979783 -62688222 + AT_rich Low_complexity Low_complexity 1 27 0 1841 190 0 3 chr20 3979792 3980102 -62687903 + AluJb SINE Alu 1 309 -3 1890 166 3 0 chr20 3980209 3980510 -62687495 - AluJo SINE Alu -10 302 1 226 250 81 32 chr20 3980720 3980844 -62687161 + L1MC4a LINE L1 4474 4603 -1543 2655 55 0 0 chr20 3980961 3981268 -62686737 + AluY SINE Alu 1 307 -4 1280 272 42 21 chr20 3981326 3981712 -62686293 + MLT1I LTR MaLR 16 409 0 34 65 0 0 chr20 3981894 3981956 -62686049 + AT_rich Low_complexity Low_complexity 1 62 0 843 248 113 72 chr20 3982031 3982327 -62685678 + L1MC4a LINE L1 5509 5828 -1980 1391 191 3 66 chr20 3982327 3982646 -62685359 + AluJo SINE Alu 1 299 -13 843 248 113 72 chr20 3982646 3982764 -62685241 + L1MC4a LINE L1 5828 5940 -1868 27 0 0 0 chr20 3982968 3982995 -62685010 + AT_rich Low_complexity Low_complexity 1 27 0 2183 117 0 3 chr20 3982999 3983298 -62684707 - AluY SINE Alu -8 303 6 27 29 0 0 chr20 3983528 3983562 -62684443 + AT_rich Low_complexity Low_complexity 1 34 0 285 29 0 0 chr20 3983679 3983713 -62684292 + (CA)n Simple_repeat Simple_repeat 2 35 0 393 274 47 1 chr20 3984906 3985046 -62682959 - MIR SINE MIR -60 148 46 2229 110 3 0 chr20 3985046 3985338 -62682667 - AluSx SINE Alu -19 293 1 1301 140 144 0 chr20 3985580 3985837 -62682168 - L1MD3 LINE L1 -8 7987 7694 21 0 0 0 chr20 3988099 3988120 -62679885 + AT_rich Low_complexity Low_complexity 1 21 0 753 192 155 118 chr20 3988277 3988690 -62679315 + MLT1J LTR MaLR 1 436 -75 2408 60 3 35 chr20 3988690 3989007 -62678998 + AluY SINE Alu 1 307 -4 753 192 155 118 chr20 3989007 3989083 -62678922 + MLT1J LTR MaLR 436 508 -3 1656 201 3 0 chr20 3989182 3989475 -62678530 - AluJb SINE Alu -16 296 3 180 250 0 0 chr20 3989674 3989718 -62678287 - MIR SINE MIR -117 145 102 2316 85 0 32 chr20 3989910 3990044 -62677961 + AluSg SINE Alu 1 138 -172 2450 99 0 0 chr20 3990044 3990356 -62677649 + AluSx SINE Alu 1 312 0 2316 85 0 32 chr20 3990356 3990537 -62677468 + AluSg SINE Alu 138 306 -4 2147 136 3 0 chr20 3990550 3990860 -62677145 + AluSx SINE Alu 1 311 -1 2307 99 3 3 chr20 3991224 3991537 -62676468 + AluSp SINE Alu 1 313 0 1401 196 32 42 chr20 3991587 3991945 -62676060 + L1MB8 LINE L1 5824 6178 0 2278 105 0 3 chr20 3991993 3992288 -62675717 + AluSq SINE Alu 1 294 -19 2243 111 3 3 chr20 3992736 3993042 -62674963 + AluSx SINE Alu 1 306 -6 1594 170 16 45 chr20 3993407 3993719 -62674286 + AluJo SINE Alu 1 303 -9 928 120 0 0 chr20 3993722 3993855 -62674150 + AluSg SINE Alu 1 133 -177 2414 57 0 3 chr20 3993855 3994177 -62673828 + AluY SINE Alu 1 321 0 21 36 0 0 chr20 3994525 3994553 -62673452 + AT_rich Low_complexity Low_complexity 1 28 0 2180 110 10 7 chr20 3994711 3995020 -62672985 - AluSg SINE Alu 0 310 1 2395 100 0 6 chr20 3995385 3995696 -62672309 - AluSx SINE Alu -3 309 1 883 210 95 81 chr20 3996165 3996593 -62671412 + MLT1D LTR MaLR 6 503 -2 185 301 240 0 chr20 3996852 3996998 -62671007 + MIR SINE MIR 28 208 -54 2106 122 28 0 chr20 3997846 3998134 -62669871 + AluSx SINE Alu 1 296 -16 1691 148 10 56 chr20 3999374 3999679 -62668326 + AluJb SINE Alu 1 291 -21 508 259 73 19 chr20 3999819 4000024 -62667981 - MIR SINE MIR 0 262 47 248 58 145 87 chr20 4000024 4000093 -62667912 + LTR66 LTR ERVL 365 437 -173 619 32 38 70 chr20 4000122 4000308 -62667697 + (TA)n Simple_repeat Simple_repeat 1 180 0 2333 83 3 3 chr20 4000308 4000596 -62667409 - AluSg1 SINE Alu -21 288 1 372 313 74 0 chr20 4000799 4000962 -62667043 - L2 LINE L2 -19 3294 3120 483 302 108 48 chr20 4001009 4001509 -62666496 - L2 LINE L2 -1571 1743 1214 23 0 0 0 chr20 4001593 4001616 -62666389 + AT_rich Low_complexity Low_complexity 1 23 0 1111 107 0 0 chr20 4001650 4001800 -62666205 + AluSg/x SINE Alu 129 278 -32 396 0 0 0 chr20 4001800 4001844 -62666161 + (CAAA)n Simple_repeat Simple_repeat 4 47 0 2226 113 0 0 chr20 4001844 4002128 -62665877 + AluSg SINE Alu 1 284 -26 371 154 125 140 chr20 4002659 4002795 -62665210 - MLT1G1 LTR MaLR -461 134 1 2795 206 137 48 chr20 4002806 4003739 -62664266 + HAL1 LINE L1 1371 2386 -121 2118 122 0 28 chr20 4003882 4004203 -62663802 + AluSx SINE Alu 1 312 0 21 57 0 0 chr20 4004820 4004855 -62663150 + AT_rich Low_complexity Low_complexity 1 35 0 2386 61 0 14 chr20 4005241 4005536 -62662469 - AluSq SINE Alu -22 291 1 342 0 0 0 chr20 4006491 4006529 -62661476 + (CA)n Simple_repeat Simple_repeat 1 38 0 25 31 0 0 chr20 4007140 4007172 -62660833 + GC_rich Low_complexity Low_complexity 1 32 0 37 52 0 0 chr20 4007308 4007366 -62660639 + GC_rich Low_complexity Low_complexity 1 58 0 2555 46 0 16 chr20 4007544 4007848 -62660157 + AluY SINE Alu 1 299 -12 2304 95 3 0 chr20 4007930 4008224 -62659781 + AluSx SINE Alu 1 295 -17 1626 147 35 22 chr20 4009479 4009793 -62658212 + L1MC1 LINE L1 6016 6333 0 2440 88 3 0 chr20 4010877 4011183 -62656822 - AluSp SINE Alu -6 307 1 186 156 0 0 chr20 4011361 4011393 -62656612 + L2 LINE L2 3238 3269 -3 2255 94 7 0 chr20 4011772 4012059 -62655946 - AluSg SINE Alu -12 298 10 862 314 24 14 chr20 4012411 4012701 -62655304 - LTR16C LTR ERVL -2 489 197 2446 82 0 3 chr20 4012702 4013007 -62654998 - AluSp SINE Alu -9 304 1 195 42 0 0 chr20 4013008 4013032 -62654973 + (TTTTC)n Simple_repeat Simple_repeat 4 27 0 1687 141 0 12 chr20 4013032 4013281 -62654724 - AluSx SINE Alu -30 282 37 2243 255 98 45 chr20 4014085 4014890 -62653115 + HAL1 LINE L1 4 851 -1656 1495 237 119 12 chr20 4014890 4015300 -62652705 - LTR16A1 LTR ERVL 0 457 4 267 234 52 0 chr20 4015300 4015377 -62652628 + HAL1 LINE L1 834 914 -1593 2356 215 127 34 chr20 4016335 4016450 -62651555 + HAL1 LINE L1 937 1040 -1467 219 69 0 0 chr20 4016450 4016479 -62651526 + (CA)n Simple_repeat Simple_repeat 2 30 0 2356 215 127 34 chr20 4016479 4017168 -62650837 + HAL1 LINE L1 1040 1816 -691 246 265 22 81 chr20 4017354 4017490 -62650515 + MIR3 SINE MIR 44 171 -37 1065 238 22 11 chr20 4017527 4017796 -62650209 - L1ME1 LINE L1 -50 6116 5845 1832 246 47 11 chr20 4017817 4018288 -62649717 - LTR16C LTR ERVL -2 489 2 1904 128 54 10 chr20 4018685 4018982 -62649023 - AluJb SINE Alu -2 310 1 21 0 0 0 chr20 4019041 4019062 -62648943 + AT_rich Low_complexity Low_complexity 1 21 0 2371 92 0 0 chr20 4019063 4019355 -62648650 - AluSx SINE Alu -19 293 2 433 143 78 0 chr20 4019366 4019443 -62648562 - L1PB4 LINE L1 -8 6148 6066 262 253 11 11 chr20 4019868 4019963 -62648042 + CT-rich Low_complexity Low_complexity 3 97 0 685 164 11 28 chr20 4019975 4020152 -62647853 + CT-rich Low_complexity Low_complexity 4 177 0 1935 115 0 19 chr20 4020167 4020436 -62647569 - AluSq SINE Alu -49 264 1 5825 199 37 33 chr20 4020597 4020918 -62647087 - L1MD2 LINE L1 0 6359 6041 2124 105 0 3 chr20 4020918 4021233 -62646772 - AluSg SINE Alu 0 314 1 5825 199 37 33 chr20 4021233 4022428 -62645577 - L1MD2 LINE L1 -318 6041 4818 1811 172 3 16 chr20 4022428 4022731 -62645274 + AluJo SINE Alu 3 301 -11 5825 199 37 33 chr20 4022731 4023613 -62644392 - L1MD2 LINE L1 -1541 4818 3941 6226 86 28 41 chr20 4023615 4025851 -62642154 + SVA Other Other 33 1386 0 3171 134 49 28 chr20 4025852 4026381 -62641624 - LTR5 LTR ERVK -94 875 336 2244 117 6 54 chr20 4026381 4026733 -62641272 - SVA Other Other -114 1272 938 1123 127 0 0 chr20 4026736 4026893 -62641112 + AluSq SINE Alu 144 300 -13 288 0 0 0 chr20 4027430 4027462 -62640543 + (TG)n Simple_repeat Simple_repeat 2 33 0 234 0 0 0 chr20 4027550 4027576 -62640429 + (A)n Simple_repeat Simple_repeat 1 26 0 298 167 0 0 chr20 4027586 4027640 -62640365 + U6 snRNA snRNA 1 54 -53 350 209 0 11 chr20 4027715 4027806 -62640199 - L1MD2 LINE L1 -2196 3950 3861 290 69 0 103 chr20 4027807 4027865 -62640140 - Tigger7 DNA MER2_type -199 2292 2241 1035 135 29 92 chr20 4027867 4028074 -62639931 + AluJb SINE Alu 1 194 -118 460 221 159 0 chr20 4028421 4028534 -62639471 - MIR SINE MIR -11 251 121 325 204 65 28 chr20 4028540 4028648 -62639357 + L1MD3 LINE L1 7092 7203 -792 722 200 0 36 chr20 4028675 4028815 -62639190 + FLAM_C SINE Alu 2 136 -7 24 0 0 0 chr20 4028815 4028839 -62639166 + AT_rich Low_complexity Low_complexity 1 24 0 655 226 145 0 chr20 4028848 4029034 -62638971 + L1MD3 LINE L1 7405 7617 -378 1918 90 56 8 chr20 4029299 4029567 -62638438 - AluSx SINE Alu -11 301 21 604 213 8 8 chr20 4029567 4029689 -62638316 - MLT1D LTR MaLR -383 122 1 228 167 0 0 chr20 4029847 4029895 -62638110 + (TG)n Simple_repeat Simple_repeat 2 49 0 209 213 0 21 chr20 4030695 4030742 -62637263 + CT-rich Low_complexity Low_complexity 3 48 0 427 279 22 0 chr20 4030898 4031034 -62636971 - LTR16A1 LTR ERVL -318 139 1 740 268 111 34 chr20 4031034 4031407 -62636598 + L1ME3A LINE L1 5502 5913 -257 2173 109 3 0 chr20 4031407 4031721 -62636284 - AluSx SINE Alu 0 315 1 740 268 111 34 chr20 4031721 4031761 -62636244 + L1ME3A LINE L1 5913 5948 -222 336 228 8 16 chr20 4031769 4031896 -62636109 + (TA)n Simple_repeat Simple_repeat 1 126 0 569 248 90 0 chr20 4031933 4032066 -62635939 + MIR SINE MIR 2 146 -116 339 214 54 74 chr20 4032074 4032376 -62635629 - MLT1H LTR MaLR 0 578 151 297 147 227 13 chr20 4032457 4032532 -62635473 + MIR SINE MIR 151 241 -21 316 297 88 11 chr20 4032747 4032838 -62635167 + L2 LINE L2 3149 3246 -26 1479 132 106 0 chr20 4033264 4033499 -62634506 + AluJb SINE Alu 1 260 -52 408 329 4 0 chr20 4033887 4034015 -62633990 + MIR SINE MIR 28 159 -49 1777 181 70 79 chr20 4034179 4034331 -62633674 - MLT1C LTR MaLR 0 467 315 2289 119 0 13 chr20 4034331 4034641 -62633364 - AluSx SINE Alu -6 306 1 1777 181 70 79 chr20 4034641 4034959 -62633046 - MLT1C LTR MaLR -152 315 1 943 226 74 36 chr20 4035021 4035358 -62632647 + L1ME3 LINE L1 5623 5972 -190 23 0 0 0 chr20 4035421 4035444 -62632561 + AT_rich Low_complexity Low_complexity 1 23 0 227 298 193 0 chr20 4035702 4035816 -62632189 + MIR SINE MIR 48 183 -79 2012 172 16 54 chr20 4036765 4037189 -62630816 - MLT2D LTR ERVL 0 414 7 1117 251 67 51 chr20 4037354 4037804 -62630201 + LTR16A1 LTR ERVL 1 457 0 378 347 41 14 chr20 4038769 4038916 -62629089 + MIR SINE MIR 28 178 -84 272 270 0 0 chr20 4039142 4039205 -62628800 - MER117 DNA MER1_type -134 63 1 547 184 9 9 chr20 4039465 4039579 -62628426 - LTR16C LTR ERVL -15 476 363 501 294 100 12 chr20 4039578 4039738 -62628267 - LTR16C LTR ERVL -246 245 72 * 1084 184 0 11 chr20 4040587 4040772 -62627233 - AluJo SINE Alu -9 303 121 851 206 16 0 chr20 4040850 4041034 -62626971 - L1ME2 LINE L1 -302 5862 5676 2566 59 0 3 chr20 4041047 4041350 -62626655 - AluY SINE Alu -9 302 1 1383 242 170 52 chr20 4041476 4041509 -62626496 + L2 LINE L2 2342 2370 -943 2863 65 11 0 chr20 4041509 4041860 -62626145 - THE1A LTR MaLR 0 355 1 1383 242 170 52 chr20 4041860 4042660 -62625345 + L2 LINE L2 2370 3289 -24 2506 142 33 26 chr20 4042811 4042861 -62625144 + MSTC LTR MaLR 1 49 -379 2239 97 0 0 chr20 4042861 4043193 -62624812 + AluSc SINE Alu 1 332 0 2506 142 33 26 chr20 4043193 4043561 -62624444 + MSTC LTR MaLR 49 425 -3 663 231 14 0 chr20 4044774 4044917 -62623088 - Charlie4a DNA MER1_type -10 498 354 3787 143 40 5 chr20 4044926 4045575 -62622430 + L1MA6 LINE L1 5616 6287 -13 434 233 26 0 chr20 4045575 4045691 -62622314 + L1MA8 LINE L1 6173 6291 0 1079 135 18 127 chr20 4045696 4045758 -62622247 + AluJb SINE Alu 84 151 -161 2358 109 7 0 chr20 4045758 4046062 -62621943 + AluSp SINE Alu 1 306 -7 1079 135 18 127 chr20 4046062 4046228 -62621777 + AluJb SINE Alu 151 287 -25 1155 188 48 27 chr20 4046241 4046299 -62621706 - Charlie4a DNA MER1_type -1621 340 285 1684 197 63 21 chr20 4046299 4046466 -62621539 + MSTD LTR MaLR 1 160 -236 2059 142 0 26 chr20 4046466 4046576 -62621429 + AluSx SINE Alu 1 112 -200 2521 67 3 0 chr20 4046576 4046873 -62621132 - AluY SINE Alu -13 298 1 2059 142 0 26 chr20 4046873 4047072 -62620933 + AluSx SINE Alu 112 302 -10 1684 197 63 21 chr20 4047072 4047284 -62620721 + MSTD LTR MaLR 160 396 0 1155 188 48 27 chr20 4047284 4047518 -62620487 - Charlie4a DNA MER1_type -1676 285 42 2320 123 0 0 chr20 4047542 4047851 -62620154 + AluSx SINE Alu 1 309 -3 232 64 0 128 chr20 4047980 4048027 -62619978 - Alu SINE Alu -6 295 255 2345 103 0 3 chr20 4048282 4048594 -62619411 - AluY SINE Alu 0 311 1 252 299 14 75 chr20 4048647 4048794 -62619211 - L1MC4a LINE L1 -1874 5934 5797 1152 180 29 130 chr20 4049676 4049874 -62618131 - L1ME3A LINE L1 -28 6142 6012 1672 135 40 72 chr20 4049874 4050178 -62617827 - AluJo SINE Alu -18 294 1 1152 180 29 130 chr20 4050178 4050424 -62617581 - L1ME3A LINE L1 -158 6012 5743 29 0 0 0 chr20 4050637 4050666 -62617339 + AT_rich Low_complexity Low_complexity 1 29 0 2694 26 0 7 chr20 4050761 4051065 -62616940 + AluY SINE Alu 1 302 -9 23 33 0 0 chr20 4051071 4051101 -62616904 + AT_rich Low_complexity Low_complexity 1 30 0 288 254 0 0 chr20 4051953 4052012 -62615993 + MIR SINE MIR 72 130 -78 305 340 0 31 chr20 4052057 4052216 -62615789 - LTR16C LTR ERVL -24 467 314 1392 181 96 67 chr20 4053087 4053394 -62614611 + Charlie4a DNA MER1_type 2 328 -1633 1635 128 121 11 chr20 4053394 4053659 -62614346 - AluSg1 SINE Alu -15 294 1 1392 181 96 67 chr20 4053659 4053798 -62614207 + Charlie4a DNA MER1_type 328 461 -47 295 242 0 0 chr20 4053854 4053916 -62614089 - MER117 DNA MER1_type -43 154 93 1610 194 78 99 chr20 4054407 4054944 -62613061 - MLT1H LTR MaLR 0 549 24 1159 168 45 27 chr20 4054951 4055171 -62612834 - AluJo SINE Alu -19 293 70 249 250 225 17 chr20 4056733 4056853 -62611152 + MER5A DNA MER1_type 43 187 -2 * 541 195 0 0 chr20 4056760 4056864 -62611141 - MER5A DNA MER1_type -80 109 6 24 0 0 0 chr20 4057258 4057282 -62610723 + AT_rich Low_complexity Low_complexity 1 24 0 778 230 221 9 chr20 4057304 4057621 -62610384 - L1MC4a LINE L1 -1988 5820 5437 471 272 154 12 chr20 4057860 4058022 -62609983 - MER5A DNA MER1_type 0 189 5 811 193 57 17 chr20 4058027 4058203 -62609802 - MER58A DNA MER1_type 0 224 42 478 265 158 24 chr20 4058332 4058585 -62609420 - LTR33A LTR ERVL -2 521 235 444 256 0 17 chr20 4058978 4059095 -62608910 - MER58 DNA MER1_type -96 119 5 1472 234 151 19 chr20 4059792 4060224 -62607781 - LTR16C LTR ERVL 0 491 3 292 266 106 9 chr20 4060231 4060344 -62607661 - MIR SINE MIR -110 152 29 1527 159 37 37 chr20 4061007 4061303 -62606702 - AluJo SINE Alu -16 296 1 1812 187 113 25 chr20 4061621 4061714 -62606291 + MLT1H LTR MaLR 39 122 -427 1959 176 26 57 chr20 4061714 4062139 -62605866 - MLT2D LTR ERVL 0 414 3 1812 187 113 25 chr20 4062139 4062515 -62605490 + MLT1H LTR MaLR 122 549 0 301 345 21 35 chr20 4062858 4062980 -62605025 + MIR SINE MIR 6 121 -141 812 170 113 0 chr20 4062980 4063139 -62604866 - MER69A DNA AcHobo 0 177 1 301 345 21 35 chr20 4063139 4063219 -62604786 + MIR SINE MIR 121 201 -61 903 239 39 8 chr20 4063508 4063763 -62604242 - LTR16A1 LTR ERVL -14 443 181 271 257 14 0 chr20 4063775 4063845 -62604160 - LTR16A1 LTR ERVL -386 71 1 360 0 0 0 chr20 4064583 4064623 -62603382 + (CA)n Simple_repeat Simple_repeat 2 41 0 24 0 0 0 chr20 4065453 4065477 -62602528 + AT_rich Low_complexity Low_complexity 1 24 0 1676 132 4 24 chr20 4065589 4065840 -62602165 - AluJo SINE Alu -36 276 31 536 301 16 43 chr20 4066519 4066891 -62601114 + L2 LINE L2 2248 2676 -638 1881 209 160 6 chr20 4067385 4067583 -62600422 - L1MD2 LINE L1 -3 6356 6159 2234 213 92 16 chr20 4067583 4068493 -62599512 - L1MC4 LINE L1 -86 6482 5488 1352 283 59 14 chr20 4068493 4068917 -62599088 + LTR47B LTR ERVL 1 443 0 2234 213 92 16 chr20 4068917 4068997 -62599008 - L1MC4 LINE L1 -1080 5488 5416 2585 54 0 25 chr20 4069000 4069317 -62598688 - AluY SINE Alu -1 310 2 4704 233 45 43 chr20 4069319 4070944 -62597061 - L1MC4 LINE L1 -2253 4287 2659 1114 158 0 0 chr20 4070946 4071110 -62596895 - FRAM SINE Alu -20 156 1 1323 140 60 168 chr20 4071111 4071690 -62596315 - L1MC4 LINE L1 -3870 2670 2030 2159 126 0 28 chr20 4071690 4072008 -62595997 - AluSg SINE Alu -1 309 1 2111 90 0 4 chr20 4072008 4072275 -62595730 - AluSx SINE Alu -13 299 34 1323 140 60 168 chr20 4072275 4072318 -62595687 - L1MC4 LINE L1 -4377 2163 2117 733 138 15 62 chr20 4072318 4072434 -62595571 + FLAM_C SINE Alu 14 125 -187 2202 96 55 0 chr20 4072434 4072726 -62595279 + AluSc SINE Alu 1 308 -1 733 138 15 62 chr20 4072726 4072739 -62595266 + FLAM_C SINE Alu 125 137 -175 8205 178 30 69 chr20 4072739 4072833 -62595172 - L1MC4 LINE L1 -4417 2123 2027 2400 100 3 6 chr20 4072833 4073144 -62594861 + AluSg SINE Alu 1 310 0 8205 178 30 69 chr20 4073144 4073880 -62594125 - L1MC4 LINE L1 -4513 2027 1264 2175 116 0 13 chr20 4073880 4074182 -62593823 - AluSx SINE Alu -14 298 1 8205 178 30 69 chr20 4074182 4075582 -62592423 - L1MC4 LINE L1 -5276 1264 16 391 331 77 14 chr20 4076040 4076327 -62591678 - L2 LINE L2 -666 2648 2344 531 233 8 8 chr20 4076754 4076874 -62591131 + L2 LINE L2 3193 3312 -1 2580 27 0 3 chr20 4077645 4077946 -62590059 - AluY SINE Alu -11 300 1 1341 199 112 38 chr20 4078559 4078926 -62589079 - MSTD LTR MaLR -2 394 1 2241 113 30 27 chr20 4078961 4079297 -62588708 - MER1B DNA MER1_type 0 337 1 2221 177 18 111 chr20 4079361 4079476 -62588529 + MER44D DNA MER2_type 1 125 -2362 2204 116 3 0 chr20 4079476 4079786 -62588219 + AluSx SINE Alu 1 311 -1 2221 177 18 111 chr20 4079786 4080273 -62587732 + MER44D DNA MER2_type 125 602 -3 201 74 0 0 chr20 4081061 4081088 -62586917 + (TA)n Simple_repeat Simple_repeat 1 27 0 230 192 19 0 chr20 4081107 4081159 -62586846 + LTR66 LTR ERVL 389 441 -169 337 190 0 130 chr20 4081182 4081282 -62586723 - L1MC4 LINE L1 -1342 6700 6614 * 430 267 0 0 chr20 4081278 4081368 -62586637 + L1MC4 LINE L1 6614 6703 -1339 425 221 28 0 chr20 4081372 4081478 -62586527 + L1MC4 LINE L1 1995 6983 -1339 386 311 0 0 chr20 4081398 4081488 -62586517 - L1MC4 LINE L1 -1339 6703 6614 * 308 196 0 0 chr20 4081479 4081530 -62586475 + L1MC4 LINE L1 6933 6983 -1339 * 418 203 32 32 chr20 4081533 4081656 -62586349 - MLT1H LTR MaLR 0 549 427 679 286 6 17 chr20 4081670 4081845 -62586160 - MLT1H LTR MaLR -271 278 106 1039 156 0 0 chr20 4081853 4082020 -62585985 - FRAM SINE Alu -9 167 1 474 172 149 0 chr20 4082025 4082112 -62585893 - MLT1H LTR MaLR -449 100 1 242 303 191 25 chr20 4082116 4082393 -62585612 + L2 LINE L2 2430 2752 -562 325 288 45 18 chr20 4082639 4082750 -62585255 - LTR67 LTR ERVL -288 269 156 385 248 205 24 chr20 4083316 4083570 -62584435 + LTR16A1 LTR ERVL 1 300 -157 1211 129 67 0 chr20 4083958 4084152 -62583853 - AluJo SINE Alu -10 302 96 194 335 181 11 chr20 4084467 4084649 -62583356 + L2 LINE L2 2599 2811 -503 397 136 0 0 chr20 4084649 4084708 -62583297 + AluS SINE Alu 1 59 -249 1428 92 0 5 chr20 4084708 4084903 -62583102 - AluSx SINE Alu -118 194 1 1424 238 24 84 chr20 4084903 4085352 -62582653 + MLT2B1 LTR ERVL 15 511 -43 189 107 0 0 chr20 4085352 4085380 -62582625 + (TATATG)n Simple_repeat Simple_repeat 2 29 0 1424 238 24 84 chr20 4085380 4085415 -62582590 + MLT2B1 LTR ERVL 511 547 -7 1244 182 81 36 chr20 4085447 4085561 -62582444 - MER33 DNA MER1_type -2262 323 216 2153 103 3 0 chr20 4085561 4085853 -62582152 + AluSp SINE Alu 1 293 -20 1244 182 81 36 chr20 4085853 4086046 -62581959 - MER33 DNA MER1_type -2369 216 2 2081 115 10 0 chr20 4086076 4086372 -62581633 + AluSx SINE Alu 1 299 -13 879 213 66 5 chr20 4086621 4086818 -62581187 + L1MC/D LINE L1 47 255 -6141 262 286 13 0 chr20 4086826 4086903 -62581102 + L1MC/D LINE L1 656 733 -5663 2279 274 33 55 chr20 4086904 4087805 -62580200 + L1MC/D LINE L1 808 1681 -4715 1946 128 0 3 chr20 4087805 4088116 -62579889 + AluSg SINE Alu 1 310 0 2279 274 33 55 chr20 4088116 4088361 -62579644 + L1MC/D LINE L1 1681 1930 -4466 4759 208 49 66 chr20 4088396 4088451 -62579554 + L1MC/D LINE L1 3662 3716 -2499 1624 183 0 7 chr20 4088451 4088773 -62579232 - AluJb SINE Alu 0 320 1 4759 208 49 66 chr20 4088773 4088922 -62579083 + L1MC/D LINE L1 3716 3866 -2349 1800 55 0 0 chr20 4088922 4089139 -62578866 + AluY SINE Alu 1 217 -94 4759 208 49 66 chr20 4089139 4089710 -62578295 + L1MC/D LINE L1 3866 4445 -1770 387 0 0 0 chr20 4089710 4089753 -62578252 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2172 82 0 0 chr20 4089755 4090034 -62577971 - AluY SINE Alu -31 280 2 4759 208 49 66 chr20 4090034 4090759 -62577246 + L1MC/D LINE L1 4446 5143 -1072 1432 134 0 0 chr20 4090800 4091009 -62576996 - AluSq SINE Alu -104 209 1 702 209 65 44 chr20 4091011 4091306 -62576699 + L1MC/D LINE L1 5230 5526 -748 2382 73 0 0 chr20 4091312 4091614 -62576391 - AluSx SINE Alu -10 302 1 1931 183 38 60 chr20 4091661 4092130 -62575875 - MLT1C LTR MaLR -8 459 1 486 226 41 81 chr20 4092132 4092389 -62575616 + L1MC5 LINE L1 7238 7493 -519 743 182 38 44 chr20 4092421 4092580 -62575425 + FAM SINE Alu 1 158 -17 335 127 51 136 chr20 4092645 4092739 -62575266 - MER33 DNA MER1_type -2261 363 279 2297 92 3 9 chr20 4092739 4093054 -62574951 + AluSp SINE Alu 1 313 0 335 127 51 136 chr20 4093054 4093077 -62574928 - MER33 DNA MER1_type -2345 279 256 28 29 0 0 chr20 4093083 4093118 -62574887 + AT_rich Low_complexity Low_complexity 1 35 0 2037 217 133 16 chr20 4093165 4093663 -62574342 - MLT1E2 LTR MaLR -64 562 7 831 229 0 10 chr20 4093667 4093872 -62574133 - MER33 DNA MER1_type -121 203 1 371 301 75 49 chr20 4093872 4094098 -62573907 + L1MC4 LINE L1 7604 7835 -207 1659 219 30 30 chr20 4094098 4094505 -62573500 - LTR52 LTR ERVL -2 419 13 2232 89 3 0 chr20 4094508 4094811 -62573194 + AluSp SINE Alu 1 304 -9 873 217 6 0 chr20 4094831 4094988 -62573017 - LTR52-int LTR ERVL -1 3555 3398 554 220 28 44 chr20 4094998 4095180 -62572825 + L1M4 LINE L1 5150 5328 -818 600 191 14 7 chr20 4095186 4095327 -62572678 + L1 LINE L1 5190 5331 -815 2281 86 10 0 chr20 4095327 4095628 -62572377 + AluSx SINE Alu 1 304 -8 6017 233 42 44 chr20 4095631 4096245 -62571760 - LTR52-int LTR ERVL -1895 1661 1047 2104 108 0 0 chr20 4096245 4096540 -62571465 + AluSx SINE Alu 1 295 -17 6017 233 42 44 chr20 4096540 4097588 -62570417 - LTR52-int LTR ERVL -2509 1047 3 2133 108 0 0 chr20 4097691 4097987 -62570018 + AluSx SINE Alu 1 296 -16 1794 143 7 23 chr20 4098259 4098567 -62569438 + AluJo SINE Alu 1 303 -9 1989 116 0 0 chr20 4098589 4098865 -62569140 + AluSg SINE Alu 1 276 -34 198 0 0 0 chr20 4098868 4098890 -62569115 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 600 273 42 0 chr20 4098890 4099055 -62568950 + LTR52-int LTR ERVL 295 466 -3090 495 216 30 82 chr20 4099088 4099143 -62568862 + MIR SINE MIR 92 148 -114 2352 139 21 3 chr20 4099143 4099525 -62568480 - MLT1B LTR MaLR 0 390 2 495 216 30 82 chr20 4099525 4099603 -62568402 + MIR SINE MIR 148 218 -44 834 181 7 0 chr20 4099641 4099790 -62568215 - FRAM SINE Alu -26 150 1 231 146 0 0 chr20 4099800 4099841 -62568164 + (TC)n Simple_repeat Simple_repeat 2 42 0 1988 102 18 0 chr20 4099841 4100115 -62567890 - AluSx SINE Alu -32 280 2 540 158 338 0 chr20 4100383 4100516 -62567489 + MER5A DNA MER1_type 3 180 -9 229 279 79 50 chr20 4100615 4100755 -62567250 + L2 LINE L2 2614 2757 -557 525 335 56 19 chr20 4100834 4101049 -62566956 + MIR SINE MIR 24 246 -16 281 221 65 0 chr20 4101167 4101244 -62566761 + LTR16C LTR ERVL 71 152 -339 301 176 0 0 chr20 4101252 4101303 -62566702 + MIR SINE MIR 132 182 -80 639 210 123 0 chr20 4101991 4102129 -62565876 - MER45A DNA AcHobo -23 155 1 1132 204 133 31 chr20 4102581 4103031 -62564974 + LTR33 LTR ERVL 24 519 -2 265 381 8 0 chr20 4103340 4103458 -62564547 + (CAGG)n Simple_repeat Simple_repeat 1 119 0 484 292 119 0 chr20 4103711 4103896 -62564109 + MLT1K LTR MaLR 376 582 -6 269 308 33 0 chr20 4103996 4104087 -62563918 + MIR SINE MIR 39 132 -76 563 226 178 51 chr20 4104357 4104649 -62563356 + MLT1K LTR MaLR 212 540 -48 985 195 5 5 chr20 4104801 4104986 -62563019 + MER5A DNA MER1_type 3 187 -2 242 212 44 97 chr20 4105035 4105148 -62562857 + LTR16A1 LTR ERVL 20 126 -331 366 240 4 0 chr20 4105755 4106006 -62561999 + (TG)n Simple_repeat Simple_repeat 1 252 0 444 219 32 45 chr20 4106343 4106498 -62561507 + L1ME4a LINE L1 5967 6119 -2 1560 241 138 95 chr20 4106673 4106862 -62561143 - L1MC4 LINE L1 -63 7979 7800 1975 129 0 3 chr20 4106862 4107156 -62560849 - AluSx SINE Alu -19 293 1 1560 241 138 95 chr20 4107156 4108570 -62559435 - L1MC4 LINE L1 -242 7800 6448 787 143 0 30 chr20 4108570 4108703 -62559302 - FLAM_C SINE Alu -4 129 1 1560 241 138 95 chr20 4108703 4109146 -62558859 - L1MC4 LINE L1 -1594 6448 6025 2465 156 21 12 chr20 4109146 4109568 -62558437 - MSTB LTR MaLR 0 426 1 1560 241 138 95 chr20 4109568 4109719 -62558286 - L1MC4 LINE L1 -2017 6025 5593 483 63 0 0 chr20 4110284 4110347 -62557658 + (TTC)n Simple_repeat Simple_repeat 1 63 0 1905 136 33 0 chr20 4110350 4110828 -62557177 - AluSq SINE Alu 0 488 1 645 318 161 35 chr20 4110878 4110994 -62557011 - L2 LINE L2 -605 2709 2609 2005 131 0 0 chr20 4110994 4111299 -62556706 - AluSq SINE Alu -4 309 5 645 318 161 35 chr20 4111299 4111901 -62556104 - L2 LINE L2 -705 2609 1853 2153 68 0 24 chr20 4111901 4112194 -62555811 + AluSc SINE Alu 1 286 -23 645 318 161 35 chr20 4112194 4112376 -62555629 - L2 LINE L2 -1461 1853 1695 1995 125 3 0 chr20 4112388 4112684 -62555321 - AluSx SINE Alu -15 297 1 21 0 0 0 chr20 4112944 4112965 -62555040 + AT_rich Low_complexity Low_complexity 1 21 0 1249 96 0 11 chr20 4113775 4113953 -62554052 + FRAM SINE Alu 1 176 0 769 167 48 0 chr20 4113967 4114121 -62553884 + FLAM_C SINE Alu 2 161 0 2195 92 3 3 chr20 4114297 4114591 -62553414 + AluSc SINE Alu 1 294 -15 1564 151 0 89 chr20 4115233 4115557 -62552448 + AluJo SINE Alu 1 295 -17 429 276 58 1 chr20 4115744 4115861 -62552144 + MLT1J LTR MaLR 59 218 -286 836 169 0 0 chr20 4116113 4116255 -62551750 - FLAM_C SINE Alu -1 142 1 1889 123 0 36 chr20 4116304 4116613 -62551392 - AluSx SINE Alu -1 311 14 695 100 9 0 chr20 4116671 4116781 -62551224 + (TTCC)n Simple_repeat Simple_repeat 4 114 0 340 137 0 0 chr20 4116781 4116832 -62551173 + (TTTC)n Simple_repeat Simple_repeat 3 53 0 1562 179 11 0 chr20 4116832 4117105 -62550900 - AluJb SINE Alu -36 276 1 1761 154 3 7 chr20 4117108 4117436 -62550569 - AluSx SINE Alu 0 327 1 1926 104 4 0 chr20 4117447 4117715 -62550290 - AluSc SINE Alu -11 298 30 1050 311 58 22 chr20 4117788 4118551 -62549454 - L1M4 LINE L1 -2007 4139 3350 1667 142 46 0 chr20 4118659 4118941 -62549064 - AluSx SINE Alu -17 295 1 314 333 6 54 chr20 4118942 4119110 -62548895 - L1M4 LINE L1 -2984 3162 3003 1439 249 51 30 chr20 4119126 4119559 -62548446 - LTR16A1 LTR ERVL -15 442 1 574 130 130 26 chr20 4119589 4119704 -62548301 + FLAM_C SINE Alu 10 136 -7 244 294 51 65 chr20 4119754 4119919 -62548086 - L1M4 LINE L1 -3184 2962 2796 2154 92 0 0 chr20 4119919 4120236 -62547769 - AluY SINE Alu 0 317 1 244 294 51 65 chr20 4120236 4120563 -62547442 - L1M4 LINE L1 -3350 2796 2476 453 268 61 37 chr20 4120622 4120868 -62547137 + L1MEc LINE L1 1532 1783 -4613 2241 101 7 0 chr20 4120926 4121233 -62546772 - AluSp SINE Alu -4 309 1 2234 193 56 39 chr20 4121487 4121615 -62546390 + L1ME1 LINE L1 5260 5384 -782 1972 135 0 14 chr20 4121615 4121912 -62546093 + AluSx SINE Alu 1 293 -19 2234 193 56 39 chr20 4121912 4122042 -62545963 + L1ME1 LINE L1 5384 5510 -656 1061 174 12 0 chr20 4122042 4122214 -62545791 + FAM SINE Alu 1 174 -1 2234 193 56 39 chr20 4122214 4122695 -62545310 + L1ME1 LINE L1 5510 6165 -1 26 0 0 0 chr20 4123028 4123054 -62544951 + AT_rich Low_complexity Low_complexity 1 26 0 2003 145 61 112 chr20 4123156 4123646 -62544359 + L1MC2 LINE L1 5871 6335 -9 550 148 59 0 chr20 4123650 4123751 -62544254 + HsTC2 DNA Tc2 1610 1716 -182 1813 166 3 3 chr20 4123790 4124092 -62543913 - AluJb SINE Alu -10 302 1 226 163 0 0 chr20 4124114 4124157 -62543848 + HsTC2 DNA Tc2 1856 1898 0 389 145 66 163 chr20 4124157 4124326 -62543679 + HsTC2 DNA Tc2 1712 1851 -47 2134 99 0 3 chr20 4124326 4124618 -62543387 + AluSg SINE Alu 6 296 -14 389 145 66 163 chr20 4124618 4124663 -62543342 + HsTC2 DNA Tc2 1851 1899 1 955 198 0 0 chr20 4124793 4124970 -62543035 - FRAM SINE Alu -1 175 1 364 221 55 47 chr20 4124972 4125099 -62542906 + L1ME4a LINE L1 5966 6093 -28 854 118 47 16 chr20 4125132 4125259 -62542746 + FLAM_C SINE Alu 1 131 -2 1380 204 28 11 chr20 4125389 4125640 -62542365 + L1MB4 LINE L1 5883 6141 -39 1346 138 142 4 chr20 4125640 4125747 -62542258 + AluJo SINE Alu 1 92 -220 273 57 0 0 chr20 4125747 4125782 -62542223 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1346 138 142 4 chr20 4125782 4125934 -62542071 + AluJo SINE Alu 92 296 -16 1380 204 28 11 chr20 4125934 4125967 -62542038 + L1MB4 LINE L1 6141 6172 -8 654 302 298 1 chr20 4125979 4126671 -62541334 - L2 LINE L2 -932 2382 1486 932 171 74 0 chr20 4126780 4126956 -62541049 + MER5A DNA MER1_type 1 189 0 185 211 19 0 chr20 4128154 4128206 -62539799 + CT-rich Low_complexity Low_complexity 2 54 0 877 134 8 0 chr20 4129004 4129138 -62538867 + AluJo SINE Alu 1 135 -177 2109 123 0 7 chr20 4129138 4129446 -62538559 + AluSp SINE Alu 1 306 -7 1965 126 0 46 chr20 4129477 4129802 -62538203 + AluSq SINE Alu 1 310 -3 357 189 0 14 chr20 4130117 4130191 -62537814 + MER53 DNA DNA 105 177 -12 7729 32 7 17 chr20 4130197 4131341 -62536664 - L1PA5 LINE L1 0 6154 5016 2820 13 0 0 chr20 4131341 4131658 -62536347 - AluYb8 SINE Alu -1 317 1 7729 32 7 17 chr20 4131658 4131856 -62536149 - L1PA5 LINE L1 -1138 5016 4818 2089 90 0 0 chr20 4132079 4132346 -62535659 + AluSq SINE Alu 1 267 -46 26 0 0 0 chr20 4132358 4132384 -62535621 + AT_rich Low_complexity Low_complexity 1 26 0 1649 102 0 8 chr20 4132402 4132638 -62535367 + AluSg/x SINE Alu 72 305 -5 302 214 258 0 chr20 4132638 4132717 -62535288 + MER5A DNA MER1_type 61 167 -22 393 316 58 36 chr20 4133462 4133686 -62534319 - MLT1H LTR MaLR -123 286 63 635 275 81 6 chr20 4133828 4134211 -62533794 + MLT1J2 LTR MaLR 3 450 0 305 280 137 30 chr20 4134389 4134557 -62533448 - MIR SINE MIR 0 262 77 456 179 60 0 chr20 4134883 4134967 -62533038 + MLT1C LTR MaLR 2 90 -377 311 244 16 57 chr20 4134981 4135104 -62532901 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 261 219 16 0 chr20 4135126 4135142 -62532863 + MER39 LTR ERV1 6 20 -911 279 0 0 0 chr20 4135142 4135173 -62532832 + (CA)n Simple_repeat Simple_repeat 2 32 0 261 219 16 0 chr20 4135173 4135220 -62532785 + MER39 LTR ERV1 20 70 -861 1709 170 28 96 chr20 4135324 4135923 -62532082 + MER39 LTR ERV1 71 565 -201 1721 196 45 45 chr20 4135984 4136006 -62531999 + MER21B LTR ERV1 449 470 -393 1947 120 21 0 chr20 4136006 4136297 -62531708 - AluSx SINE Alu -15 297 1 1721 196 45 45 chr20 4136297 4136556 -62531449 + MER21B LTR ERV1 470 734 -129 2114 106 3 0 chr20 4136556 4136870 -62531135 + AluSp SINE Alu 1 315 0 1721 196 45 45 chr20 4136870 4136990 -62531015 + MER21B LTR ERV1 733 852 -11 1301 170 92 60 chr20 4136999 4137092 -62530913 + MLT1C LTR MaLR 86 175 -292 1978 103 33 0 chr20 4137092 4137395 -62530610 + AluSg SINE Alu 1 312 0 2140 79 4 0 chr20 4137404 4137715 -62530290 + AluY SINE Alu 1 312 0 1301 170 92 60 chr20 4137715 4137979 -62530026 + MLT1C LTR MaLR 182 467 0 880 242 82 35 chr20 4137982 4138329 -62529676 + MLT1H LTR MaLR 80 498 -57 1787 87 121 8 chr20 4138329 4138594 -62529411 + AluSx SINE Alu 1 295 -17 880 242 82 35 chr20 4138594 4138654 -62529351 + MLT1H LTR MaLR 498 554 -1 22 0 0 0 chr20 4138792 4138814 -62529191 + AT_rich Low_complexity Low_complexity 1 22 0 564 228 21 35 chr20 4138870 4139015 -62528990 - LTR67 LTR ERVL -379 178 36 286 325 98 8 chr20 4139185 4139308 -62528697 + MLT1K LTR MaLR 138 271 -317 361 212 185 20 chr20 4139549 4139563 -62528442 - MIR SINE MIR -56 206 196 2301 86 3 0 chr20 4139563 4139865 -62528140 - AluSx SINE Alu -9 303 1 361 212 185 20 chr20 4139865 4140001 -62528004 - MIR SINE MIR -66 196 31 262 194 19 68 chr20 4140473 4140576 -62527429 + (CGGGG)n Simple_repeat Simple_repeat 5 102 0 21 95 0 0 chr20 4140843 4140906 -62527099 + GC_rich Low_complexity Low_complexity 1 63 0 23 0 0 0 chr20 4141012 4141035 -62526970 + GC_rich Low_complexity Low_complexity 1 23 0 1137 326 126 35 chr20 4141813 4142576 -62525429 + L2 LINE L2 1603 2295 -1018 2370 88 0 0 chr20 4142576 4142883 -62525122 - AluSq SINE Alu -6 307 1 1137 326 126 35 chr20 4142883 4143662 -62524343 + L2 LINE L2 2295 3297 -16 607 236 188 0 chr20 4144451 4144616 -62523389 - MIR SINE MIR -26 236 41 258 286 11 55 chr20 4144635 4144726 -62523279 - MIR SINE MIR -169 93 7 511 221 105 70 chr20 4146012 4146118 -62521887 - MER5A DNA MER1_type -1 188 71 1699 130 71 22 chr20 4146118 4146414 -62521591 - AluSx SINE Alu 0 309 1 511 221 105 70 chr20 4146414 4146478 -62521527 - MER5A DNA MER1_type -118 71 11 343 232 45 18 chr20 4147160 4147272 -62520733 + MIR SINE MIR 34 148 -60 25 31 0 0 chr20 4147356 4147388 -62520617 + AT_rich Low_complexity Low_complexity 1 32 0 325 200 71 0 chr20 4147865 4147950 -62520055 - MER103 DNA DNA -46 120 30 203 61 0 30 chr20 4148174 4148207 -62519798 + MIR SINE MIR 109 140 -68 2165 114 0 0 chr20 4148495 4148794 -62519211 - AluSx SINE Alu -13 299 1 361 217 33 11 chr20 4148897 4148989 -62519016 + MIR SINE MIR 84 177 -85 188 222 22 0 chr20 4149362 4149407 -62518598 - L2 LINE L2 -557 2757 2712 2441 44 0 0 chr20 4149648 4149946 -62518059 - AluY SINE Alu -8 303 6 2145 91 42 0 chr20 4150877 4151163 -62516842 - AluSq SINE Alu -15 298 1 234 271 0 0 chr20 4151241 4151300 -62516705 + MIR SINE MIR 95 153 -109 393 282 113 15 chr20 4152145 4152370 -62515635 + MIR SINE MIR 11 258 -4 333 155 42 0 chr20 4153516 4153587 -62514418 + L2 LINE L2 3239 3312 -1 191 200 36 0 chr20 4154174 4154229 -62513776 + L2 LINE L2 2924 2980 -292 181 263 0 0 chr20 4154497 4154535 -62513470 - MIR SINE MIR -102 160 123 436 233 68 48 chr20 4154914 4155060 -62512945 - MER5B DNA MER1_type -8 170 22 2679 197 48 10 chr20 4155250 4155768 -62512237 - MLT1F LTR MaLR -4 538 1 343 203 203 72 chr20 4156139 4156277 -62511728 - MIR SINE MIR -82 180 25 1510 190 33 53 chr20 4156645 4156798 -62511207 - AluJo SINE Alu -8 294 148 2407 72 0 3 chr20 4156798 4157105 -62510900 - AluSg SINE Alu -4 306 1 1510 190 33 53 chr20 4157105 4157251 -62510754 - AluJo SINE Alu -154 148 1 311 198 74 12 chr20 4157458 4157539 -62510466 - MIR SINE MIR -112 150 65 916 188 0 0 chr20 4158106 4158260 -62509745 - AluJ SINE Alu -19 293 140 244 262 65 19 chr20 4159345 4159452 -62508553 - MIR3 SINE MIR -82 126 15 2344 87 0 0 chr20 4160298 4160608 -62507397 - AluSx SINE Alu -2 310 1 925 185 0 0 chr20 4160635 4160879 -62507126 - AluJo SINE Alu 0 364 121 795 129 16 8 chr20 4160919 4161043 -62506962 - AluJo SINE Alu -177 135 11 186 189 81 0 chr20 4161772 4161809 -62506196 + L2 LINE L2 3225 3264 -8 515 188 0 0 chr20 4162215 4162300 -62505705 - AluSg/x SINE Alu -9 301 217 180 0 0 0 chr20 4163028 4163048 -62504957 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1563 268 44 24 chr20 4164851 4165392 -62502613 - L1ME3 LINE L1 -21 6141 5590 199 197 0 30 chr20 4166521 4166587 -62501418 + CT-rich Low_complexity Low_complexity 4 67 0 1859 115 0 4 chr20 4167771 4168031 -62499974 - AluSx SINE Alu -11 301 43 447 257 0 18 chr20 4168133 4168246 -62499759 - MLT1H LTR MaLR -438 111 1 28 86 0 0 chr20 4169510 4169580 -62498425 + AT_rich Low_complexity Low_complexity 1 70 0 840 213 66 5 chr20 4169649 4169786 -62498219 + MER3 DNA MER1_type 1 155 -54 2156 106 10 0 chr20 4169786 4170088 -62497917 - AluSg SINE Alu -5 305 1 840 213 66 5 chr20 4170088 4170147 -62497858 + MER3 DNA MER1_type 155 209 0 405 215 58 0 chr20 4170157 4170291 -62497714 - L1M4 LINE L1 -1979 4167 4020 2323 103 3 0 chr20 4170422 4170734 -62497271 - AluSp SINE Alu 0 313 1 553 310 92 50 chr20 4170967 4171348 -62496657 - MARNA DNA Mariner -122 464 68 778 234 49 0 chr20 4171392 4171576 -62496429 + MIR SINE MIR 21 213 -49 270 367 110 4 chr20 4172284 4172521 -62495484 + L2 LINE L2 2715 2976 -338 215 194 235 20 chr20 4172622 4172720 -62495285 + L2 LINE L2 3138 3256 -16 564 176 126 75 chr20 4175652 4175728 -62492277 - MER3 DNA MER1_type 0 209 138 1877 141 3 66 chr20 4175728 4176047 -62491958 - AluJb SINE Alu -13 299 1 564 176 126 75 chr20 4176047 4176169 -62491836 - MER3 DNA MER1_type -71 138 1 843 250 58 43 chr20 4176681 4176957 -62491048 - MLT1J LTR MaLR -199 312 33 443 95 0 0 chr20 4176969 4177032 -62490973 + FRAM/FAM SINE Alu 24 86 -90 287 116 0 0 chr20 4177121 4177164 -62490841 + MER5A DNA MER1_type 33 75 -114 1606 127 5 0 chr20 4177164 4177384 -62490621 + AluSg/x SINE Alu 84 304 -6 21 0 0 0 chr20 4177413 4177434 -62490571 + AT_rich Low_complexity Low_complexity 1 21 0 1606 127 5 0 chr20 4177448 4177668 -62490337 + AluSg/x SINE Alu 84 304 -6 326 237 76 42 chr20 4177717 4177784 -62490221 + MER5A DNA MER1_type 61 135 -54 1792 160 0 20 chr20 4177784 4178077 -62489928 + AluJo SINE Alu 14 300 -12 326 237 76 42 chr20 4178077 4178127 -62489878 + MER5A DNA MER1_type 135 182 -7 307 335 112 61 chr20 4178219 4178595 -62489410 + L2 LINE L2 2870 3264 -8 * 570 245 82 19 chr20 4178592 4178809 -62489196 - MIR SINE MIR 0 262 40 2436 84 3 0 chr20 4179854 4180165 -62487840 - AluSx SINE Alu 0 312 1 927 157 0 0 chr20 4180345 4180479 -62487526 + FRAM SINE Alu 28 161 -15 834 167 0 0 chr20 4180604 4180724 -62487281 + FLAM_C SINE Alu 1 120 -23 332 308 18 18 chr20 4180779 4180948 -62487057 + (CA)n Simple_repeat Simple_repeat 2 170 0 1188 156 35 25 chr20 4181287 4181486 -62486519 - AluJo SINE Alu -28 284 84 250 282 13 0 chr20 4181507 4181585 -62486420 + (CA)n Simple_repeat Simple_repeat 2 80 0 2161 126 7 0 chr20 4181692 4181986 -62486019 - AluSx SINE Alu -16 296 1 229 250 38 0 chr20 4182161 4182241 -62485764 - L1MC4a LINE L1 -1868 5940 5858 2390 103 0 3 chr20 4182243 4182555 -62485450 + AluSq SINE Alu 1 311 -2 221 287 210 7 chr20 4182949 4183092 -62484913 - MIR SINE MIR -10 252 81 1716 248 79 46 chr20 4183194 4183511 -62484494 + L1ME3 LINE L1 5533 5880 -282 1851 168 14 0 chr20 4183511 4183826 -62484179 + AluJb SINE Alu 1 319 0 1716 248 79 46 chr20 4183826 4184075 -62483930 + L1ME3 LINE L1 5880 6119 -43 271 261 57 11 chr20 4185781 4185869 -62482136 + MLT1K LTR MaLR 494 585 -3 998 283 130 41 chr20 4186106 4186935 -62481070 + L2 LINE L2 2336 3311 -2 2460 68 19 3 chr20 4187746 4188054 -62479951 + AluSp SINE Alu 1 313 0 1668 135 8 4 chr20 4188463 4188707 -62479298 + AluSp SINE Alu 1 245 -68 1289 249 63 89 chr20 4188725 4189145 -62478860 - L1ME3A LINE L1 -26 6144 5714 2303 123 0 0 chr20 4189145 4189455 -62478550 + AluSg SINE Alu 1 310 0 1289 249 63 89 chr20 4189455 4189524 -62478481 - L1ME3A LINE L1 -456 5714 5670 2462 97 0 0 chr20 4189524 4189835 -62478170 - AluSx SINE Alu -1 311 1 1289 249 63 89 chr20 4189835 4189914 -62478091 - L1ME3A LINE L1 -500 5670 5590 583 218 177 0 chr20 4190306 4190453 -62477552 + MER5A DNA MER1_type 4 176 -13 474 257 70 23 chr20 4190709 4190814 -62477191 + MER5A DNA MER1_type 4 121 -68 2781 148 4 40 chr20 4190814 4191033 -62476972 - MER66B LTR ERV1 -4 482 257 2622 44 3 0 chr20 4191033 4191330 -62476675 - AluY SINE Alu -13 298 1 2781 148 4 40 chr20 4191330 4191610 -62476395 - MER66B LTR ERV1 -229 257 1 474 257 70 23 chr20 4191610 4191675 -62476330 + MER5A DNA MER1_type 121 182 -7 188 245 102 0 chr20 4191689 4191738 -62476267 - MER5B DNA MER1_type 0 178 125 351 135 58 106 chr20 4191773 4191830 -62476175 - MER5B DNA MER1_type -2 176 125 2236 88 39 20 chr20 4191830 4191967 -62476038 + AluSx SINE Alu 1 134 -178 2278 102 0 13 chr20 4191967 4192272 -62475733 + AluSq SINE Alu 1 301 -12 2236 88 39 20 chr20 4192272 4192440 -62475565 + AluSx SINE Alu 134 312 0 351 135 58 106 chr20 4192440 4192486 -62475519 - MER5B DNA MER1_type -53 125 78 455 323 45 15 chr20 4192545 4192746 -62475259 - ERVL LTR ERVL -3508 2256 2050 1839 125 3 44 chr20 4193126 4193423 -62474582 - AluSx SINE Alu -10 302 18 1795 163 7 17 chr20 4193517 4193817 -62474188 - AluJo SINE Alu -15 297 1 1119 279 70 52 chr20 4193819 4193855 -62474150 - L1ME3A LINE L1 0 6170 6136 3001 127 6 31 chr20 4193855 4194029 -62473976 + MER70A LTR ERVL 1 178 -294 2327 93 7 3 chr20 4194029 4194331 -62473674 + AluSx SINE Alu 3 305 -7 3001 127 6 31 chr20 4194331 4194638 -62473367 + MER70A LTR ERVL 178 470 -2 1119 279 70 52 chr20 4194638 4194989 -62473016 - L1ME3A LINE L1 -34 6136 5793 2343 103 0 6 chr20 4194989 4195300 -62472705 - AluSq SINE Alu -4 309 1 1119 279 70 52 chr20 4195300 4195334 -62472671 - L1ME3A LINE L1 -377 5793 5761 2221 114 0 0 chr20 4195334 4195633 -62472372 - AluSx SINE Alu -6 306 8 1119 279 70 52 chr20 4195633 4195841 -62472164 - L1ME3A LINE L1 -409 5761 5528 520 223 11 0 chr20 4195841 4195935 -62472070 + MER70A LTR ERVL 128 222 -250 314 176 0 0 chr20 4195949 4196000 -62472005 - MER70A LTR ERVL -139 333 283 523 192 0 0 chr20 4196028 4196148 -62471857 - L1M4 LINE L1 -2454 3692 3573 574 101 0 0 chr20 4196151 4196276 -62471729 + AluSp/q SINE Alu 205 329 0 365 238 159 24 chr20 4196276 4196402 -62471603 - L1M4 LINE L1 -2567 3579 3437 628 260 49 4 chr20 4196415 4196661 -62471344 - L1M4 LINE L1 -2932 3214 2958 * 2781 229 23 26 chr20 4196652 4196908 -62471097 - L1M4 LINE L1 -2812 3334 3079 2587 161 23 73 chr20 4196908 4197449 -62470556 - LTR9 LTR ERV1 0 612 107 2334 96 3 0 chr20 4197449 4197742 -62470263 + AluSq SINE Alu 1 294 -19 2587 161 23 73 chr20 4197742 4197844 -62470161 - LTR9 LTR ERV1 -505 107 1 2781 229 23 26 chr20 4197844 4198199 -62469806 - L1M4 LINE L1 -3067 3079 2724 2596 115 74 5 chr20 4198199 4198633 -62469372 + MER4C LTR ERV1 1 464 -1 2781 229 23 26 chr20 4198633 4198861 -62469144 - L1M4 LINE L1 -3422 2724 2497 2759 153 68 10 chr20 4198871 4199120 -62468885 - L1MC3 LINE L1 -8 7777 7544 2707 182 109 78 chr20 4199120 4199428 -62468577 + MER21B LTR ERV1 1 298 -565 1496 201 30 27 chr20 4199428 4199727 -62468278 + AluJo SINE Alu 1 300 -12 2707 182 109 78 chr20 4199727 4199954 -62468051 + MER21B LTR ERV1 298 516 -347 2506 92 0 0 chr20 4199954 4200258 -62467747 + AluSx SINE Alu 1 304 -8 2707 182 109 78 chr20 4200258 4200556 -62467449 + MER21B LTR ERV1 516 861 -2 2759 153 68 10 chr20 4200556 4200653 -62467352 - L1MC3 LINE L1 -241 7544 7454 2375 103 3 7 chr20 4200653 4200963 -62467042 - AluSq SINE Alu 0 313 5 2759 153 68 10 chr20 4200963 4201190 -62466815 - L1MC3 LINE L1 -331 7454 7170 1634 136 0 0 chr20 4201218 4201439 -62466566 - AluSx SINE Alu -91 221 1 263 305 12 0 chr20 4201651 4201733 -62466272 - L1ME LINE L1 -542 5579 5497 2370 84 0 3 chr20 4201766 4202065 -62465940 + AluSg SINE Alu 1 298 -12 397 233 78 3 chr20 4202426 4202541 -62465464 + MLT1I LTR MaLR 65 171 -238 721 121 60 0 chr20 4203091 4203207 -62464798 + FLAM_A SINE Alu 1 123 -10 21 0 0 0 chr20 4203214 4203235 -62464770 + AT_rich Low_complexity Low_complexity 1 21 0 2017 161 3 0 chr20 4203389 4203699 -62464306 + AluJo SINE Alu 1 311 -1 2336 98 16 7 chr20 4204122 4204428 -62463577 + AluSp SINE Alu 1 309 -4 346 239 8 62 chr20 4204520 4204650 -62463355 + L2 LINE L2 2523 2645 -669 * 841 267 160 11 chr20 4204637 4205011 -62462994 + L2 LINE L2 2884 3313 0 2350 97 0 6 chr20 4205831 4206142 -62461863 - AluSc SINE Alu 0 309 1 2150 114 19 10 chr20 4206169 4206477 -62461528 + AluSx SINE Alu 1 311 -1 284 278 14 0 chr20 4206633 4206705 -62461300 + MLT1L LTR MaLR 1 73 -542 498 129 24 0 chr20 4206733 4206818 -62461187 - MER58 DNA MER1_type -3 2417 2331 315 153 42 14 chr20 4206823 4206895 -62461110 - MER58 DNA MER1_type -188 153 80 2448 85 0 28 chr20 4206899 4207033 -62460972 + AluSx SINE Alu 1 137 -175 2507 68 0 10 chr20 4207033 4207343 -62460662 + AluY SINE Alu 1 307 -4 2448 85 0 28 chr20 4207343 4207525 -62460480 + AluSx SINE Alu 137 308 -4 201 74 0 0 chr20 4208400 4208427 -62459578 + (A)n Simple_repeat Simple_repeat 1 27 0 4032 128 2 11 chr20 4210427 4210942 -62457063 + MER41B LTR ERV1 1 510 -125 2361 87 37 3 chr20 4210942 4211240 -62456765 - AluSq SINE Alu -5 308 1 4032 128 2 11 chr20 4211240 4211365 -62456640 + MER41B LTR ERV1 510 635 0 680 155 43 183 chr20 4213990 4214196 -62453809 + Charlie4a DNA MER1_type 2 141 -1820 2393 177 101 18 chr20 4214196 4214711 -62453294 + LTR64 LTR ERVK 1 558 0 680 155 43 183 chr20 4214711 4214853 -62453152 + Charlie4a DNA MER1_type 141 301 -207 396 157 56 111 chr20 4214859 4214967 -62453038 + L1M4 LINE L1 4829 4930 -1216 838 237 23 0 chr20 4214967 4215182 -62452823 + Charlie4a DNA MER1_type 286 505 -3 2232 121 12 3 chr20 4215336 4215682 -62452323 + MER47A DNA MER2_type 2 350 -16 2480 79 3 10 chr20 4216745 4217050 -62450955 - AluSg SINE Alu -7 303 1 1865 154 40 3 chr20 4217166 4217465 -62450540 - AluSx SINE Alu 0 312 3 1191 245 155 19 chr20 4218073 4218505 -62449500 - LTR16C LTR ERVL 0 491 1 192 167 146 0 chr20 4218984 4219032 -62448973 + L2 LINE L2 2920 2974 -298 216 317 80 38 chr20 4219181 4219443 -62448562 + L2 LINE L2 2392 2664 -650 488 144 0 11 chr20 4219444 4219534 -62448471 + (TTCC)n Simple_repeat Simple_repeat 3 91 0 963 54 0 0 chr20 4219547 4219658 -62448347 - AluSq/x SINE Alu -202 111 1 341 276 22 67 chr20 4219659 4219793 -62448212 + L2 LINE L2 2615 2742 -572 184 306 0 0 chr20 4220243 4220292 -62447713 - L2 LINE L2 -14 3299 3251 231 340 57 0 chr20 4220349 4220455 -62447550 + L2 LINE L2 1314 1425 -1889 757 205 227 4 chr20 4220785 4221058 -62446947 + L2 LINE L2 2015 2348 -966 * 964 247 37 72 chr20 4221051 4221452 -62446553 - L2 LINE L2 -96 3217 2831 749 283 148 24 chr20 4221450 4222138 -62445867 + L2 LINE L2 2542 3309 -4 * 516 86 21 21 chr20 4222744 4222837 -62445168 + (TTTC)n Simple_repeat Simple_repeat 2 94 0 1669 173 73 0 chr20 4222849 4223015 -62444990 - AluJo SINE Alu -2 310 157 276 30 0 0 chr20 4223015 4223048 -62444957 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1669 173 73 0 chr20 4223048 4223170 -62444835 - AluJo SINE Alu -155 157 1 213 229 48 60 chr20 4223211 4223294 -62444711 + L2 LINE L2 3191 3272 0 2362 101 3 3 chr20 4223656 4223964 -62444041 - AluSq SINE Alu -4 309 2 969 224 137 25 chr20 4224413 4224771 -62443234 + LTR16A1 LTR ERVL 7 404 -53 728 206 0 0 chr20 4224773 4224904 -62443101 + FLAM_A SINE Alu 2 132 -1 1837 167 0 4 chr20 4224929 4225198 -62442807 + AluJb SINE Alu 1 268 -44 295 175 16 0 chr20 4225306 4225369 -62442636 + LTR16A1 LTR ERVL 394 457 0 852 266 18 9 chr20 4226479 4226708 -62441297 - L2 LINE L2 -250 3063 2833 248 272 12 25 chr20 4227132 4227213 -62440792 + CT-rich Low_complexity Low_complexity 2 81 0 866 209 102 10 chr20 4227888 4228084 -62439921 + MIR SINE MIR 20 233 -29 198 320 78 31 chr20 4228182 4228310 -62439695 - L2 LINE L2 -822 2492 2359 1337 196 220 14 chr20 4228357 4228776 -62439229 + MLT1D LTR MaLR 1 505 0 821 133 0 66 chr20 4229019 4229170 -62438835 + FRAM SINE Alu 23 163 -13 183 80 0 0 chr20 4229211 4229236 -62438769 + (A)n Simple_repeat Simple_repeat 1 25 0 1540 95 30 22 chr20 4229409 4229588 -62438417 - AluSg/x SINE Alu -11 299 116 234 0 0 0 chr20 4229588 4229614 -62438391 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 1540 95 30 22 chr20 4229614 4229665 -62438340 - AluSg/x SINE Alu -194 116 67 2222 92 0 16 chr20 4229717 4230031 -62437974 + AluSx SINE Alu 1 309 -3 375 212 118 0 chr20 4230467 4230552 -62437453 - MER63 DNA MER1_type -338 724 4 2083 246 97 69 chr20 4231172 4232263 -62435742 + L1MC5 LINE L1 6698 7777 -184 2165 107 7 0 chr20 4232263 4232563 -62435442 + AluSx SINE Alu 1 302 -10 2083 246 97 69 chr20 4232563 4232719 -62435286 + L1MC5 LINE L1 7777 7927 -34 1435 146 18 98 chr20 4232865 4233200 -62434805 + L1MB1 LINE L1 5860 6167 -1 22 0 0 0 chr20 4233201 4233223 -62434782 + AT_rich Low_complexity Low_complexity 1 22 0 221 208 21 0 chr20 4233291 4233339 -62434666 - L2 LINE L2 -1 3271 3223 1140 249 46 51 chr20 4233702 4234075 -62433930 - L1ME3 LINE L1 -51 6111 5741 225 65 0 0 chr20 4234610 4234641 -62433364 + (TG)n Simple_repeat Simple_repeat 2 32 0 281 278 19 37 chr20 4236992 4237100 -62430905 + L1ME3A LINE L1 5843 5948 -222 447 242 115 73 chr20 4237736 4237901 -62430104 - MIR SINE MIR -83 179 8 449 288 89 67 chr20 4237913 4238330 -62429675 - L2 LINE L2 -35 3237 2812 395 316 32 7 chr20 4238475 4238630 -62429375 - L2 LINE L2 -513 2801 2643 312 180 22 22 chr20 4240662 4240751 -62427254 + L1MB7 LINE L1 6096 6184 0 1474 199 0 7 chr20 4240792 4241096 -62426909 - AluJb SINE Alu 0 303 2 247 301 0 36 chr20 4241158 4241241 -62426764 - L2 LINE L2 -2 3311 3232 708 216 5 90 chr20 4241243 4241465 -62426540 - MLT1D LTR MaLR -302 203 1 529 303 34 6 chr20 4241524 4241702 -62426303 - MIR SINE MIR -55 207 25 211 226 57 0 chr20 4241959 4242012 -62425993 - L2 LINE L2 -2 3311 3256 233 272 12 0 chr20 4242857 4242938 -62425067 - L1ME LINE L1 -269 5852 5771 805 148 51 120 chr20 4243201 4243365 -62424640 + MER3 DNA MER1_type 2 149 -60 677 208 0 0 chr20 4243365 4243490 -62424515 - FLAM_A SINE Alu -8 125 1 805 148 51 120 chr20 4243490 4243541 -62424464 + MER3 DNA MER1_type 149 202 -7 21 57 0 0 chr20 4243610 4243645 -62424360 + AT_rich Low_complexity Low_complexity 1 35 0 1832 155 0 0 chr20 4243707 4244004 -62424001 - AluSg SINE Alu -13 297 1 27 29 0 0 chr20 4244004 4244038 -62423967 + AT_rich Low_complexity Low_complexity 1 34 0 1226 136 11 0 chr20 4244054 4244245 -62423760 - AluJb SINE Alu -119 193 1 233 240 13 40 chr20 4244253 4244328 -62423677 + MER113 DNA MER1_type? 439 511 -10 1299 164 8 4 chr20 4244756 4244994 -62423011 - AluSg SINE Alu -8 302 64 246 189 0 0 chr20 4245094 4245131 -62422874 - Alu SINE Alu -265 37 1 2391 64 0 3 chr20 4245146 4245443 -62422562 - AluSc SINE Alu -13 296 1 248 233 0 27 chr20 4245445 4245518 -62422487 - L1MC4a LINE L1 -1868 5940 5870 545 256 40 74 chr20 4245520 4245696 -62422309 + MIR SINE MIR 61 230 -32 1792 172 3 0 chr20 4245710 4246013 -62421992 - AluJb SINE Alu -8 304 1 1920 95 74 7 chr20 4246026 4246311 -62421694 - AluSx SINE Alu -8 304 1 880 296 57 55 chr20 4246323 4246836 -62421169 - L1MC4a LINE L1 -1993 5815 5302 26 50 0 0 chr20 4247237 4247277 -62420728 + AT_rich Low_complexity Low_complexity 1 40 0 2122 120 0 0 chr20 4247395 4247696 -62420309 + AluSg SINE Alu 1 301 -9 256 130 87 0 chr20 4247857 4247903 -62420102 - L2 LINE L2 -6 3307 3258 2093 94 16 13 chr20 4248522 4248829 -62419176 - AluSc SINE Alu -1 308 1 2162 228 37 42 chr20 4248833 4249550 -62418455 - L1M4c LINE L1 -4659 2300 1606 2034 109 0 0 chr20 4249551 4249827 -62418178 + AluSc SINE Alu 1 276 -33 532 321 103 26 chr20 4250008 4250357 -62417648 - L1M4 LINE L1 -3381 2765 2390 267 165 66 11 chr20 4250397 4250488 -62417517 + (TTTAA)n Simple_repeat Simple_repeat 4 99 0 243 286 128 36 chr20 4250518 4251238 -62416767 + L1M4 LINE L1 4613 5398 -748 5330 136 12 16 chr20 4251238 4252084 -62415921 - MER4D LTR ERV1 0 903 62 1288 254 80 15 chr20 4252147 4252624 -62415381 - HAL1 LINE L1 -295 2212 1705 405 369 77 45 chr20 4253594 4253742 -62414263 - L2 LINE L2 -43 3229 3087 5342 76 18 7 chr20 4253742 4254476 -62413529 - L1PA13 LINE L1 -3 6160 5419 405 369 77 45 chr20 4254476 4254794 -62413211 - L2 LINE L2 -185 3087 2740 3463 154 43 60 chr20 4254794 4255497 -62412508 - LTR8 LTR ERV1 0 691 1 405 369 77 45 chr20 4255497 4255618 -62412387 - L2 LINE L2 -532 2740 2624 239 242 0 16 chr20 4255634 4255696 -62412309 - MER5A DNA MER1_type -120 69 9 915 190 0 22 chr20 4255844 4256023 -62411982 - MER5B DNA MER1_type 0 178 4 22 0 0 0 chr20 4256145 4256167 -62411838 + AT_rich Low_complexity Low_complexity 1 22 0 1192 133 0 0 chr20 4256537 4256710 -62411295 - AluSp SINE Alu -7 306 134 1777 160 66 0 chr20 4256754 4257073 -62410932 + MLT2C1 LTR ERVL 1 340 -57 213 196 0 0 chr20 4257203 4257249 -62410756 + (CATA)n Simple_repeat Simple_repeat 3 48 0 224 137 69 8 chr20 4257270 4257401 -62410604 + (TA)n Simple_repeat Simple_repeat 1 139 0 251 158 58 42 chr20 4257447 4257567 -62410438 + (TTATA)n Simple_repeat Simple_repeat 4 125 0 382 85 34 0 chr20 4257568 4257627 -62410378 + MLT2C1 LTR ERVL 460 520 0 439 293 97 49 chr20 4257633 4257970 -62410035 - HAL1b LINE L1 -785 1477 219 272 30 0 0 chr20 4258461 4258494 -62409511 - MADE1 DNA Mariner -42 38 6 403 237 161 79 chr20 4258973 4259302 -62408703 + MER90 LTR ERV1 1 356 -219 371 178 204 25 chr20 4259578 4259727 -62408278 - MLT1H LTR MaLR -239 310 53 674 222 25 76 chr20 4259734 4259932 -62408073 + MIR SINE MIR 75 262 0 287 224 0 0 chr20 4260420 4260469 -62407536 + MER91 DNA MER1_type 89 137 -3 249 250 75 66 chr20 4261758 4261848 -62406157 - L1ME4a LINE L1 -34 6087 5999 2065 118 10 0 chr20 4261848 4262145 -62405860 - AluSx SINE Alu -8 304 5 249 250 75 66 chr20 4262145 4262282 -62405723 - L1ME4a LINE L1 -122 5999 5858 1592 293 107 20 chr20 4262684 4263957 -62404048 - L1M4 LINE L1 -1886 4260 2877 1799 227 59 70 chr20 4264372 4264967 -62403038 + MER77 LTR ERV1 54 703 -3 181 219 0 24 chr20 4265224 4265265 -62402740 - L2 LINE L2 -4 3268 3229 239 267 50 25 chr20 4265346 4265466 -62402539 + L1M4 LINE L1 2863 2985 -3161 10952 140 95 50 chr20 4266028 4268350 -62399655 + L1MCa LINE L1 5 2429 -3997 1125 238 34 3 chr20 4268360 4268684 -62399321 - L1M4 LINE L1 -3661 2485 2152 * 1963 141 41 69 chr20 4268683 4268726 -62399279 + L1MC1 LINE L1 5812 5855 -478 2176 104 0 16 chr20 4268726 4269034 -62398971 + AluSx SINE Alu 1 303 -9 1963 141 41 69 chr20 4269034 4269380 -62398625 + L1MC1 LINE L1 5855 6190 -143 283 214 18 18 chr20 4269517 4269629 -62398376 + (CCG)n Simple_repeat Simple_repeat 2 113 0 22 56 0 0 chr20 4269877 4269913 -62398092 + GC_rich Low_complexity Low_complexity 1 36 0 476 251 150 24 chr20 4270859 4271066 -62396939 + MIR SINE MIR 7 239 -23 289 340 52 43 chr20 4272348 4272672 -62395333 + L2 LINE L2 2304 2630 -684 276 100 0 0 chr20 4273132 4273172 -62394833 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 893 94 0 24 chr20 4273173 4273300 -62394705 - FLAM_C SINE Alu -19 124 1 2201 87 10 0 chr20 4273480 4273779 -62394226 + AluSc SINE Alu 1 302 -7 254 252 165 52 chr20 4274085 4274200 -62393805 + MIR3 SINE MIR 33 160 -48 1710 159 3 37 chr20 4274255 4274576 -62393429 + AluJb SINE Alu 1 310 -2 245 352 0 0 chr20 4274802 4274873 -62393132 + HAL1 LINE L1 14 84 -2423 482 261 31 15 chr20 4275170 4275240 -62392765 - L2 LINE L2 0 3313 3246 186 43 0 0 chr20 4275240 4275263 -62392742 + (TA)n Simple_repeat Simple_repeat 2 24 0 1628 160 0 42 chr20 4275264 4275576 -62392429 - AluJo SINE Alu -13 299 1 482 261 31 15 chr20 4275576 4275633 -62392372 - L2 LINE L2 -66 3247 3182 704 289 97 62 chr20 4276561 4276993 -62391012 - MLT1J2 LTR MaLR -3 447 1 258 229 16 16 chr20 4278093 4278154 -62389851 + MIR SINE MIR 92 152 -110 471 277 125 64 chr20 4279051 4279394 -62388611 + MLT1I LTR MaLR 46 409 0 434 263 126 11 chr20 4279459 4279634 -62388371 + L1ME LINE L1 5566 5760 -410 220 362 31 6 chr20 4279737 4279900 -62388105 - L2 LINE L2 -1620 1694 1528 1702 230 69 17 chr20 4280302 4280706 -62387299 - MER89-int LTR ERV1 -4582 2219 1795 471 18 0 0 chr20 4280813 4280869 -62387136 + (TA)n Simple_repeat Simple_repeat 1 56 0 1901 143 6 25 chr20 4280894 4281208 -62386797 - MLT2C1 LTR ERVL -59 338 31 4161 244 110 48 chr20 4281209 4282703 -62385302 - MER89-int LTR ERV1 -5212 1589 3 1961 154 63 48 chr20 4282705 4283027 -62384978 - MER89 LTR ERV1 0 559 128 1760 164 43 0 chr20 4283027 4283326 -62384679 + AluJb SINE Alu 1 312 0 1961 154 63 48 chr20 4283326 4283451 -62384554 - MER89 LTR ERV1 -431 128 6 1091 121 86 0 chr20 4284316 4284368 -62383637 - AluSx SINE Alu -123 189 143 290 45 23 0 chr20 4284368 4284412 -62383593 + (TTTA)n Simple_repeat Simple_repeat 2 46 0 1091 121 86 0 chr20 4284412 4284533 -62383472 - AluSx SINE Alu -169 143 1 506 347 155 14 chr20 4284547 4284880 -62383125 - L2 LINE L2 0 3313 2902 9211 45 1 0 chr20 4284880 4285950 -62382055 - MER11C LTR ERVK 0 1071 1 506 347 155 14 chr20 4285950 4286054 -62381951 - L2 LINE L2 -411 2902 2814 1116 143 5 69 chr20 4286160 4286376 -62381629 + AluJb SINE Alu 1 202 -110 867 104 0 30 chr20 4286376 4286510 -62381495 - AluSg/x SINE Alu -10 302 173 657 167 9 0 chr20 4286510 4286618 -62381387 + AluJb SINE Alu 190 298 -14 498 278 200 4 chr20 4286815 4287085 -62380920 - L2 LINE L2 0 3313 2991 1145 279 141 39 chr20 4287224 4287521 -62380484 - L2 LINE L2 -706 2608 2342 1609 149 26 48 chr20 4287521 4287830 -62380175 - AluJo SINE Alu -10 302 1 1145 279 141 39 chr20 4287830 4288243 -62379762 - L2 LINE L2 -972 2342 1826 255 315 9 9 chr20 4288251 4288384 -62379621 + L1P4 LINE L1 5351 5483 -671 1511 177 46 87 chr20 4288671 4288900 -62379105 - MLT1A2 LTR MaLR 0 374 166 1993 138 0 0 chr20 4288900 4289196 -62378809 - AluJb SINE Alu -11 301 6 1511 177 46 87 chr20 4289196 4289356 -62378649 - MLT1A2 LTR MaLR -208 166 1 1966 159 8 74 chr20 4289489 4289880 -62378125 - MLT1A1 LTR MaLR 0 365 1 345 145 0 0 chr20 4289900 4289962 -62378043 + (T)n Simple_repeat Simple_repeat 1 62 0 1993 131 0 7 chr20 4289983 4290288 -62377717 - AluSg SINE Alu -7 303 1 325 197 39 55 chr20 4290304 4290431 -62377574 - L1M4 LINE L1 -2123 4521 4397 188 234 62 47 chr20 4291104 4291168 -62376837 + L2 LINE L2 1764 1828 -1486 989 192 12 0 chr20 4291222 4291389 -62376616 - FAM SINE Alu -6 169 1 729 177 0 0 chr20 4291407 4291531 -62376474 - L1ME3A LINE L1 -5 6165 6042 22 0 0 0 chr20 4291920 4291942 -62376063 + AT_rich Low_complexity Low_complexity 1 22 0 2245 67 0 3 chr20 4291951 4292259 -62375746 + AluY SINE Alu 1 307 0 1708 178 57 22 chr20 4292260 4292626 -62375379 - L1MB8 LINE L1 -7 6171 5793 774 164 47 8 chr20 4292646 4292774 -62375231 + FLAM_C SINE Alu 1 133 0 5025 185 22 100 chr20 4292779 4293770 -62374235 - L1M4 LINE L1 -5350 1192 324 1929 129 28 0 chr20 4293770 4294057 -62373948 - AluSx SINE Alu -17 295 1 5025 185 22 100 chr20 4294057 4294358 -62373647 - L1M4 LINE L1 -6218 324 1 1966 66 66 4 chr20 4294361 4294620 -62373385 - THE1C LTR MaLR 0 375 101 949 254 108 20 chr20 4294619 4294961 -62373044 + MLT1L LTR MaLR 243 614 -1 * 2281 81 0 0 chr20 4295685 4295983 -62372022 - AluY SINE Alu -13 298 1 770 128 43 0 chr20 4296121 4296238 -62371767 - AluJo SINE Alu -176 136 15 217 354 66 21 chr20 4296552 4296751 -62371254 + MIR SINE MIR 2 206 -56 1800 247 42 6 chr20 4296779 4297252 -62370753 - LTR16C LTR ERVL 0 491 2 198 279 16 16 chr20 4299346 4299407 -62368598 + L2 LINE L2 3004 3064 -208 200 94 0 31 chr20 4299487 4299519 -62368486 + (TCC)n Simple_repeat Simple_repeat 3 33 0 234 0 0 0 chr20 4301357 4301383 -62366622 + (TC)n Simple_repeat Simple_repeat 1 26 0 549 299 12 46 chr20 4303071 4303312 -62364693 - L1MC4a LINE L1 -1894 5914 5682 637 234 158 85 chr20 4303316 4303777 -62364228 - MLT1J LTR MaLR -5 506 12 883 278 60 3 chr20 4303781 4304065 -62363940 - L1MC4a LINE L1 -2152 5656 5357 421 217 101 22 chr20 4304285 4304423 -62363582 - MIR SINE MIR -96 166 18 200 33 0 33 chr20 4304467 4304497 -62363508 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 45404 35 3 2 chr20 4304497 4310628 -62357377 - L1PA3 LINE L1 -16 6139 1 289 250 57 34 chr20 4310644 4310732 -62357273 - MIR3 SINE MIR -23 185 96 254 188 21 0 chr20 4311308 4311356 -62356649 + MLT1L LTR MaLR 120 168 -447 2400 64 0 0 chr20 4311501 4311798 -62356207 - AluY SINE Alu -14 297 1 347 239 185 8 chr20 4312054 4312184 -62355821 + MLT1L LTR MaLR 446 598 -17 711 300 65 43 chr20 4312256 4312796 -62355209 - L1MC4a LINE L1 -1940 5868 5317 372 345 45 61 chr20 4312827 4312957 -62355048 - L1MC4a LINE L1 -860 5286 5155 15558 32 0 1 chr20 4312957 4315540 -62352465 - L1PA4 LINE L1 -6 6149 3565 372 345 45 61 chr20 4315540 4315768 -62352237 - L1MC4a LINE L1 -991 5155 4934 2287 239 49 42 chr20 4316502 4316875 -62351130 + L1ME3 LINE L1 5466 5835 -327 2275 154 26 8 chr20 4316875 4317258 -62350747 + MLT1B LTR MaLR 1 390 0 2287 239 49 42 chr20 4317258 4317307 -62350698 + L1ME3 LINE L1 5835 5882 -280 1854 122 0 0 chr20 4317307 4317595 -62350410 + AluSx SINE Alu 27 314 0 2287 239 49 42 chr20 4317595 4317859 -62350146 + L1ME3 LINE L1 5882 6159 -3 360 294 27 55 chr20 4318722 4318868 -62349137 - MIR SINE MIR -64 144 3 637 142 67 8 chr20 4318918 4319052 -62348953 + MER96B DNA MER1_type? 80 221 -196 366 374 138 16 chr20 4319906 4320152 -62347853 - L2 LINE L2 -2 3270 2995 318 98 0 0 chr20 4320174 4320225 -62347780 + (ATG)n Simple_repeat Simple_repeat 3 53 0 229 136 182 30 chr20 4322096 4322162 -62345843 + LTR33A LTR ERVL 7 82 -441 461 303 161 8 chr20 4322201 4322455 -62345550 + LTR16C LTR ERVL 169 461 -30 392 245 19 19 chr20 4322645 4322751 -62345254 - MIR3 SINE MIR -6 202 97 210 337 23 0 chr20 4323116 4323202 -62344803 - L2 LINE L2 -220 3052 2965 424 304 88 0 chr20 4323275 4323456 -62344549 + MIR SINE MIR 2 198 -64 1194 281 98 7 chr20 4323711 4324159 -62343846 - LTR16C LTR ERVL -2 489 1 909 256 86 6 chr20 4324739 4325063 -62342942 - LTR16C LTR ERVL -52 439 90 205 204 41 0 chr20 4325189 4325238 -62342767 + L2 LINE L2 2716 2766 -548 333 296 107 15 chr20 4325852 4326048 -62341957 + LTR16C LTR ERVL 1 214 -277 552 228 28 61 chr20 4326092 4326272 -62341733 + LTR16C LTR ERVL 306 479 -12 628 266 88 57 chr20 4327495 4327792 -62340213 + MLT1K LTR MaLR 103 408 -180 306 194 0 0 chr20 4327819 4327881 -62340124 + GA-rich Low_complexity Low_complexity 2 63 0 463 333 145 0 chr20 4327982 4328210 -62339795 + LTR16C LTR ERVL 3 263 -228 612 205 8 0 chr20 4328263 4328380 -62339625 + LTR16C LTR ERVL 370 487 -4 2316 145 19 128 chr20 4328570 4329047 -62338958 - MSTA LTR MaLR -1 425 1 1269 283 82 50 chr20 4329549 4329964 -62338041 + L2 LINE L2 2449 2849 -464 1939 166 0 7 chr20 4329964 4330266 -62337739 - AluSx SINE Alu -12 300 1 1269 283 82 50 chr20 4330266 4330682 -62337323 + L2 LINE L2 2849 3313 0 21 0 0 0 chr20 4330748 4330769 -62337236 + AT_rich Low_complexity Low_complexity 1 21 0 4104 108 0 0 chr20 4331073 4331627 -62336378 - MER41A LTR ERV1 0 554 1 303 253 20 20 chr20 4332176 4332275 -62335730 - MIR SINE MIR -8 254 156 5469 152 46 20 chr20 4332309 4332612 -62335393 - L1MDb LINE L1 -3890 2516 2222 4148 100 32 0 chr20 4332612 4333174 -62334831 + LTR19B LTR ERV1 1 580 0 5469 152 46 20 chr20 4333174 4334038 -62333967 - L1MDb LINE L1 -4184 2222 1316 218 288 43 0 chr20 4334041 4334129 -62333876 + MIR SINE MIR 97 151 -57 2064 104 24 7 chr20 4334700 4334988 -62333017 - AluSc SINE Alu -16 293 1 547 174 174 19 chr20 4335757 4335918 -62332087 - MER5A DNA MER1_type 0 189 4 2582 78 0 0 chr20 4336114 4336423 -62331582 + AluY SINE Alu 3 311 0 243 279 39 34 chr20 4336610 4336791 -62331214 + L1ME4a LINE L1 4880 5060 -1086 21 36 0 0 chr20 4336837 4336865 -62331140 + AT_rich Low_complexity Low_complexity 1 28 0 230 139 0 0 chr20 4336960 4336996 -62331009 + L1MC3 LINE L1 6079 6114 -1671 2231 184 59 36 chr20 4337357 4337420 -62330585 + MLT1D LTR MaLR 1 61 -444 1872 160 39 64 chr20 4337420 4337826 -62330179 - MSTD LTR MaLR 0 396 1 2231 184 59 36 chr20 4337826 4338256 -62329749 + MLT1D LTR MaLR 61 505 0 592 291 73 36 chr20 4338263 4338676 -62329329 + L1ME4a LINE L1 5513 5940 -181 302 342 91 17 chr20 4339424 4339655 -62328350 + MLT1K LTR MaLR 170 417 -171 803 178 127 35 chr20 4340039 4340236 -62327769 - MLT1I LTR MaLR 0 409 195 788 196 18 48 chr20 4340291 4340356 -62327649 + MER45A DNA AcHobo 1 66 -1515 2626 53 0 0 chr20 4340356 4340658 -62327347 - AluY SINE Alu -9 302 1 788 196 18 48 chr20 4340658 4340760 -62327245 + MER45A DNA AcHobo 66 163 -15 1957 157 13 10 chr20 4340870 4341176 -62326829 - AluJb SINE Alu 0 312 6 502 291 6 28 chr20 4341178 4341360 -62326645 - MLT1I LTR MaLR -231 178 1 1015 245 155 31 chr20 4342543 4342931 -62325074 + LTR16A1 LTR ERVL 6 441 -16 187 231 0 0 chr20 4344092 4344131 -62323874 + L2 LINE L2 3201 3239 -33 240 324 171 9 chr20 4344736 4344847 -62323158 - MIR SINE MIR -64 144 16 881 201 140 13 chr20 4345002 4345231 -62322774 + LOR1a LTR ERV1 240 497 0 1672 241 48 31 chr20 4345506 4345984 -62322021 + LTR16C LTR ERVL 6 491 0 181 216 27 0 chr20 4347227 4347264 -62320741 - MIR SINE MIR -117 145 108 1192 253 88 62 chr20 4347373 4347907 -62320098 - MLT1H LTR MaLR 0 549 2 200 273 18 0 chr20 4348756 4348811 -62319194 - MER5C DNA MER1_type -268 56 1 657 267 138 57 chr20 4348846 4349164 -62318841 + MER115 DNA AcHobo 119 462 -231 182 242 15 0 chr20 4349882 4349948 -62318057 + (CA)n Simple_repeat Simple_repeat 2 68 0 2291 145 89 2 chr20 4351030 4351327 -62316678 - MSTC LTR MaLR 0 428 87 2591 59 0 3 chr20 4351327 4351633 -62316372 - AluY SINE Alu -6 305 1 2291 145 89 2 chr20 4351633 4351729 -62316276 - MSTC LTR MaLR -341 87 1 1359 261 77 3 chr20 4353667 4354043 -62313962 - LTR16C LTR ERVL -3 488 85 2274 93 31 3 chr20 4354862 4355152 -62312853 + AluSx SINE Alu 1 298 -14 319 113 141 14 chr20 4355269 4355340 -62312665 + L1MB3 LINE L1 6103 6182 -1 190 188 0 31 chr20 4356514 4356578 -62311427 + CT-rich Low_complexity Low_complexity 3 64 0 312 299 189 0 chr20 4356957 4357084 -62310921 - MER5A DNA MER1_type 0 189 39 529 227 93 7 chr20 4357135 4357285 -62310720 - MER5B DNA MER1_type -15 163 1 280 200 15 0 chr20 4357739 4357804 -62310201 + MER116 DNA Mariner 1 66 -14 308 267 12 23 chr20 4358239 4358325 -62309680 - L2 LINE L2 0 3272 3188 656 212 190 0 chr20 4358385 4358564 -62309441 - LTR16A LTR ERVL 0 450 238 1250 212 60 50 chr20 4358613 4359010 -62308995 - Charlie4a DNA MER1_type -85 423 23 2492 60 16 0 chr20 4359270 4359585 -62308420 - L1PA7 LINE L1 0 6154 5835 758 73 73 0 chr20 4359585 4359695 -62308310 + L1PA7 LINE L1 5728 5845 -327 300 289 87 47 chr20 4360145 4360294 -62307711 + MLT1I LTR MaLR 60 214 -195 275 226 10 126 chr20 4360372 4360499 -62307506 + MLT1I LTR MaLR 290 533 -16 288 280 112 9 chr20 4360790 4360897 -62307108 - L2 LINE L2 -8 3305 3188 930 269 143 36 chr20 4361542 4361753 -62306252 - MLT1J LTR MaLR -36 475 288 1883 148 58 0 chr20 4361753 4362044 -62305961 + AluJb SINE Alu 1 308 -4 930 269 143 36 chr20 4362044 4362240 -62305765 - MLT1J LTR MaLR -223 288 23 463 283 118 48 chr20 4362240 4362555 -62305450 - MLT1I LTR MaLR 0 409 73 220 353 88 20 chr20 4363911 4364013 -62303992 - L2 LINE L2 -9 3263 3155 29 60 0 0 chr20 4364071 4364121 -62303884 + AT_rich Low_complexity Low_complexity 1 50 0 2335 113 0 0 chr20 4364376 4364687 -62303318 - AluSq SINE Alu -2 311 1 21 0 0 0 chr20 4364748 4364769 -62303236 + AT_rich Low_complexity Low_complexity 1 21 0 4460 170 12 35 chr20 4365380 4366258 -62301747 - L1MB8 LINE L1 -11 6447 5590 1093 231 30 36 chr20 4366259 4366596 -62301409 - L1MB8 LINE L1 -962 5464 5130 4284 189 44 43 chr20 4366604 4367472 -62300533 - L1MB8 LINE L1 -2797 3629 2763 2301 92 7 0 chr20 4367472 4367764 -62300241 - AluY SINE Alu -17 294 1 4284 189 44 43 chr20 4367764 4368261 -62299744 - L1MB8 LINE L1 -3663 2763 2268 1065 110 64 0 chr20 4368261 4368434 -62299571 + L1PB1 LINE L1 5968 6151 0 4284 189 44 43 chr20 4368434 4368922 -62299083 - L1MB8 LINE L1 -4158 2268 1770 2151 141 0 0 chr20 4368922 4369219 -62298786 - AluSx SINE Alu -15 297 1 4284 189 44 43 chr20 4369219 4369285 -62298720 - L1MB8 LINE L1 -4656 1770 1706 6830 166 56 44 chr20 4369333 4370800 -62297205 - L1MCa LINE L1 -4935 1491 7 2501 235 60 16 chr20 4370786 4370861 -62297144 - L1M4 LINE L1 -1816 5141 5071 * 438 36 0 0 chr20 4370861 4370917 -62297088 + (TG)n Simple_repeat Simple_repeat 2 57 0 2501 235 60 16 chr20 4370917 4371542 -62296463 - L1M4 LINE L1 -1886 5071 4410 1282 179 20 32 chr20 4371557 4371808 -62296197 - AluJo SINE Alu -11 301 54 2112 242 47 22 chr20 4371830 4372641 -62295364 - L1M4 LINE L1 -2566 4391 3561 2415 77 0 10 chr20 4372648 4372945 -62295060 - AluY SINE Alu -17 294 1 2743 215 26 72 chr20 4372949 4373666 -62294339 - L1M4 LINE L1 -4659 2300 1659 2226 107 7 0 chr20 4373666 4373955 -62294050 + AluSc SINE Alu 1 291 -18 2743 215 26 72 chr20 4373955 4374391 -62293614 - L1M4 LINE L1 -5300 1659 1205 2042 288 32 25 chr20 4374934 4375775 -62292230 - L1M4 LINE L1 -5914 945 29 1051 287 158 25 chr20 4375848 4376113 -62291892 + L2 LINE L2 2460 2688 -625 2209 151 100 5 chr20 4376113 4376504 -62291501 + MSTA LTR MaLR 1 428 0 1051 287 158 25 chr20 4376504 4377006 -62290999 + L2 LINE L2 2688 3313 0 458 219 185 14 chr20 4377995 4378141 -62289864 + MER5A DNA MER1_type 18 188 -1 493 221 106 0 chr20 4378149 4378262 -62289743 + MER58A DNA MER1_type 1 125 0 2234 158 49 30 chr20 4378262 4378784 -62289221 + MLT2A2 LTR ERVL 1 554 0 649 158 0 0 chr20 4378784 4378877 -62289128 + MER58A DNA MER1_type 121 213 -11 228 237 34 17 chr20 4379202 4379261 -62288744 + L2 LINE L2 3205 3264 -8 329 241 85 42 chr20 4379376 4379511 -62288494 - MIR SINE MIR -63 145 19 346 332 71 33 chr20 4380124 4380461 -62287544 + LTR16C LTR ERVL 121 470 -21 396 239 50 111 chr20 4380474 4380834 -62287171 - L1M4 LINE L1 -1907 4239 3902 2225 123 123 3 chr20 4380863 4381244 -62286761 - MSTA LTR MaLR 0 428 2 324 319 51 37 chr20 4381398 4381614 -62286391 - MLT1H LTR MaLR -300 249 31 299 226 52 43 chr20 4381644 4381759 -62286246 - L1M4 LINE L1 -2234 3912 3797 1945 179 40 37 chr20 4382104 4382650 -62285355 + MLT2A2 LTR ERVL 3 554 0 2477 161 38 5 chr20 4382656 4383078 -62284927 + MLT1C LTR MaLR 29 464 -3 217 306 14 0 chr20 4383487 4383559 -62284446 - MIR SINE MIR -109 153 81 2022 159 34 41 chr20 4383591 4383912 -62284093 - L1PB4 LINE L1 -7 6149 5830 1670 173 38 14 chr20 4383912 4384201 -62283804 - AluJb SINE Alu -16 296 1 2022 159 34 41 chr20 4384201 4384293 -62283712 - L1PB4 LINE L1 -326 5830 5739 458 272 89 19 chr20 4384331 4384489 -62283516 + MER117 DNA MER1_type 1 169 -28 271 276 100 119 chr20 4385104 4385238 -62282767 - L2 LINE L2 0 3272 3137 2428 67 0 0 chr20 4385238 4385535 -62282470 - AluY SINE Alu -14 297 1 271 276 100 119 chr20 4385535 4385711 -62282294 - L2 LINE L2 -135 3137 2968 316 260 156 21 chr20 4386300 4386396 -62281609 - L2 LINE L2 -1 3271 3163 1370 238 125 14 chr20 4386853 4387277 -62280728 + MLT1H LTR MaLR 43 513 -36 2020 127 13 22 chr20 4387277 4387592 -62280413 - L1MC1 LINE L1 -1 6332 6021 484 284 71 31 chr20 4388809 4389034 -62278971 + MLT1K LTR MaLR 332 565 -23 267 233 0 44 chr20 4390124 4390214 -62277791 - LTR67 LTR ERVL -4 553 468 1631 301 60 2 chr20 4390214 4390752 -62277253 - MLT2E LTR ERVL 0 628 60 2290 112 3 0 chr20 4391200 4391495 -62276510 - AluSx SINE Alu -16 296 1 260 309 253 19 chr20 4391495 4391760 -62276245 + L3 LINE CR1 733 1059 -518 285 323 16 55 chr20 4392151 4392278 -62275727 + L3 LINE CR1 1397 1518 -59 620 227 116 17 chr20 4393050 4393222 -62274783 + MER5A DNA MER1_type 1 189 0 755 165 23 78 chr20 4393399 4393603 -62274402 + MER39B LTR ERV1 6 246 -461 1834 138 3 46 chr20 4393632 4393957 -62274048 + L1MA7 LINE L1 5398 5708 -583 3375 123 32 28 chr20 4394096 4394663 -62273342 + L1MA7 LINE L1 5720 6288 -3 3083 145 18 16 chr20 4394697 4395194 -62272811 + MER39 LTR ERV1 210 707 0 2211 116 0 3 chr20 4395731 4396033 -62271972 + AluSg SINE Alu 1 301 -9 1414 128 14 28 chr20 4397248 4397466 -62270539 - AluJo SINE Alu -95 217 3 2267 105 0 0 chr20 4397530 4397824 -62270181 - AluSg SINE Alu -14 296 3 1866 98 91 14 chr20 4398237 4398513 -62269492 + AluSx SINE Alu 1 297 -15 821 176 48 53 chr20 4398923 4399111 -62268894 - MER5A DNA MER1_type -2 187 1 849 168 0 142 chr20 4399433 4399564 -62268441 - AluJb SINE Alu -10 302 205 630 60 0 0 chr20 4399564 4399647 -62268358 - L1PB1 LINE L1 0 6151 6069 849 168 0 142 chr20 4399647 4399705 -62268300 - AluJb SINE Alu -107 205 140 1518 246 64 16 chr20 4399724 4400159 -62267846 - MLT1C LTR MaLR -1 466 11 469 204 78 131 chr20 4400303 4400494 -62267511 + MER5A DNA MER1_type 9 189 0 521 306 99 55 chr20 4400498 4401377 -62266628 - L1M4 LINE L1 -1243 4903 3982 388 266 63 67 chr20 4401402 4401909 -62266096 - L1MDa LINE L1 -961 1940 1296 875 180 17 45 chr20 4402041 4402219 -62265786 - MER5B DNA MER1_type -4 174 2 909 287 103 25 chr20 4402936 4403841 -62264164 + L1ME3 LINE L1 4931 5906 -256 2155 186 46 5 chr20 4403877 4404428 -62263577 + L1MC/D LINE L1 5156 5770 -472 311 217 0 29 chr20 4404428 4404497 -62263508 + LTR16C LTR ERVL 425 491 0 258 265 9 104 chr20 4404602 4404832 -62263173 + HAL1 LINE L1 953 1160 -1347 453 325 50 54 chr20 4404940 4405444 -62262561 - L1M4c LINE L1 -3235 3191 2690 4880 229 125 29 chr20 4405491 4406437 -62261568 + L1MD1 LINE L1 16 1155 -5385 2147 94 3 24 chr20 4406437 4406757 -62261248 + AluSq SINE Alu 2 315 0 4880 229 125 29 chr20 4406757 4407269 -62260736 + L1MD1 LINE L1 1155 1617 -4923 10768 25 0 0 chr20 4407279 4409238 -62258767 - L1PA2 LINE L1 0 6155 4196 11030 167 26 69 chr20 4409240 4412094 -62255911 + L1MD1 LINE L1 3338 6013 -623 2473 80 0 0 chr20 4412094 4412405 -62255600 + AluY SINE Alu 1 311 0 11030 167 26 69 chr20 4412405 4412988 -62255017 + L1MD1 LINE L1 6013 6619 -17 302 298 112 22 chr20 4413016 4413194 -62254811 - L1M4c LINE L1 -3959 2467 2274 443 277 162 16 chr20 4413554 4413784 -62254221 - L1M4c LINE L1 -839 1948 1481 406 145 0 0 chr20 4413888 4413950 -62254055 + L1MD2 LINE L1 6068 6129 -230 532 209 86 94 chr20 4413954 4414188 -62253817 + L2 LINE L2 3077 3308 -5 331 257 51 91 chr20 4414259 4414374 -62253631 + HAL1 LINE L1 992 1110 -1397 8067 65 31 2 chr20 4414374 4415353 -62252652 - LTR13 LTR ERVK 0 1007 1 331 257 51 91 chr20 4415353 4415490 -62252515 + HAL1 LINE L1 1110 1234 -1273 290 259 82 13 chr20 4415476 4415634 -62252371 - L1M4 LINE L1 -3126 3020 2852 * 4647 138 72 35 chr20 4416269 4416719 -62251286 - L1MA7 LINE L1 -6 6285 5853 2442 76 0 3 chr20 4416719 4417022 -62250983 - AluY SINE Alu -9 302 1 4647 138 72 35 chr20 4417022 4417463 -62250542 - L1MA7 LINE L1 -438 5853 5361 * 9107 154 43 7 chr20 4417461 4419052 -62248953 + L1 LINE L1 3656 5311 -835 207 0 0 0 chr20 4419052 4419075 -62248930 + (CAA)n Simple_repeat Simple_repeat 2 24 0 9107 154 43 7 chr20 4419075 4419137 -62248868 + L1 LINE L1 5311 5369 -777 342 0 0 0 chr20 4419309 4419347 -62248658 + (TG)n Simple_repeat Simple_repeat 2 39 0 1649 175 51 7 chr20 4419800 4420092 -62247913 - AluJb SINE Alu -7 305 1 317 356 47 13 chr20 4420298 4420447 -62247558 + L1ME LINE L1 4673 4826 -1320 459 237 0 17 chr20 4420923 4421041 -62246964 + L1ME LINE L1 5567 5682 -439 261 163 0 0 chr20 4421063 4421112 -62246893 + (CA)n Simple_repeat Simple_repeat 2 50 0 1327 154 0 5 chr20 4421222 4421423 -62246582 + MER20 DNA MER1_type 20 219 0 222 267 0 0 chr20 4421721 4421781 -62246224 - MIR SINE MIR 0 262 203 264 228 176 29 chr20 4421891 4422027 -62245978 - L1ME4a LINE L1 -96 6025 5870 197 183 17 0 chr20 4422136 4422196 -62245809 + GA-rich Low_complexity Low_complexity 2 62 0 350 230 137 36 chr20 4422201 4422340 -62245665 + L1MC5 LINE L1 6957 7109 -852 181 229 0 42 chr20 4422376 4422424 -62245581 + L2 LINE L2 3227 3272 0 351 260 48 10 chr20 4423208 4423312 -62244693 - MIR3 SINE MIR -54 154 47 396 224 70 29 chr20 4423964 4424114 -62243891 + MIR SINE MIR 16 182 -62 26 0 0 0 chr20 4425022 4425048 -62242957 + AT_rich Low_complexity Low_complexity 1 26 0 247 325 103 0 chr20 4425096 4425213 -62242792 + MLT1J2 LTR MaLR 34 162 -288 333 265 12 12 chr20 4425244 4425327 -62242678 + MLT1I LTR MaLR 196 278 -131 243 339 42 0 chr20 4425454 4425572 -62242433 - MIR3 SINE MIR -53 155 33 245 311 56 0 chr20 4426356 4426446 -62241559 - L2 LINE L2 -18 3295 3201 1074 184 44 73 chr20 4426630 4427044 -62240961 - MLT1A1 LTR MaLR 0 396 1 293 361 28 7 chr20 4427160 4427304 -62240701 - L2 LINE L2 -507 2807 2661 454 328 31 0 chr20 4427741 4427869 -62240136 + MER91C DNA MER1_type 9 140 0 280 175 0 289 chr20 4427903 4428069 -62239936 + MER5B DNA MER1_type 59 176 -2 297 348 170 8 chr20 4428082 4428464 -62239541 + L2 LINE L2 1135 1578 -1736 591 235 184 26 chr20 4428551 4428785 -62239220 - MLT1H1 LTR MaLR 0 555 285 532 286 83 18 chr20 4428880 4429097 -62238908 - MLT1H1 LTR MaLR -244 305 75 1604 188 16 12 chr20 4429852 4430172 -62237833 + MER74C LTR ERVL 155 460 0 1117 303 85 16 chr20 4431006 4431451 -62236554 + LTR16C LTR ERVL 1 476 -15 2064 144 0 0 chr20 4431656 4431954 -62236051 - AluSx SINE Alu -14 298 1 231 114 0 0 chr20 4432484 4432519 -62235486 + (TG)n Simple_repeat Simple_repeat 2 36 0 1261 261 93 3 chr20 4432600 4432987 -62235018 - MLT2E LTR ERVL -206 422 1 307 363 109 11 chr20 4434189 4434566 -62233439 + L1ME4a LINE L1 5531 5944 -226 228 304 0 0 chr20 4434906 4434975 -62233030 + L2 LINE L2 1869 1937 -1377 1656 206 165 15 chr20 4435013 4435493 -62232512 - L1ME1 LINE L1 -34 6132 5581 2276 237 13 27 chr20 4435655 4436204 -62231801 + MER87 LTR ERV1 1 541 0 1887 199 36 117 chr20 4436508 4436896 -62231109 - MLT1E2 LTR MaLR 0 626 208 2846 62 84 77 chr20 4436896 4437350 -62230655 + L1PA7 LINE L1 5698 6154 0 1887 199 36 117 chr20 4437350 4437536 -62230469 - MLT1E2 LTR MaLR -418 208 103 962 236 56 87 chr20 4437536 4437719 -62230286 + MLT1C LTR MaLR 1 188 -279 2316 66 3 17 chr20 4437719 4438007 -62229998 + AluSp SINE Alu 30 313 0 962 236 56 87 chr20 4438007 4438305 -62229700 + MLT1C LTR MaLR 188 467 0 1887 199 36 117 chr20 4438305 4438347 -62229658 - MLT1E2 LTR MaLR -523 103 59 236 258 30 0 chr20 4438389 4438455 -62229550 - MLT1E2 LTR MaLR -434 71 4 419 281 98 38 chr20 4438458 4438693 -62229312 + L2 LINE L2 2478 2726 -588 597 300 34 39 chr20 4438693 4439122 -62228883 - MLT1J LTR MaLR 0 511 71 10539 74 21 0 chr20 4439245 4441401 -62226604 - L1PA7 LINE L1 -8 6146 3960 2201 125 10 3 chr20 4441403 4441708 -62226297 - AluSx SINE Alu -5 307 1 2000 105 3 46 chr20 4441819 4442125 -62225880 - AluSc SINE Alu -16 293 1 260 319 57 110 chr20 4442623 4442940 -62225065 + L2 LINE L2 2956 3255 -17 420 261 49 33 chr20 4443059 4443243 -62224762 + L1ME4a LINE L1 5931 6117 -4 297 75 0 0 chr20 4443283 4443323 -62224682 + (TG)n Simple_repeat Simple_repeat 1 40 0 868 200 65 28 chr20 4444141 4444356 -62223649 - MIR SINE MIR 0 262 40 567 224 133 7 chr20 4444731 4444874 -62223131 - MER5A DNA MER1_type -15 174 14 311 215 0 15 chr20 4445312 4445377 -62222628 + L2 LINE L2 3242 3305 -8 1941 146 73 6 chr20 4445498 4445841 -62222164 - L1MB5 LINE L1 -18 6156 5791 259 241 102 37 chr20 4445931 4446039 -62221966 + MER117 DNA MER1_type 81 195 -2 2461 199 0 0 chr20 4446614 4447032 -62220973 - MER47B DNA MER2_type 0 418 1 1934 151 13 10 chr20 4448052 4448187 -62219818 + AluSx SINE Alu 1 134 -178 2287 92 0 7 chr20 4448187 4448480 -62219525 + AluY SINE Alu 1 291 -20 1934 151 13 10 chr20 4448480 4448655 -62219350 + AluSx SINE Alu 134 312 0 238 309 89 16 chr20 4449064 4449187 -62218818 + MIR3 SINE MIR 12 143 -65 1260 254 40 27 chr20 4449291 4449373 -62218632 + L1MC4a LINE L1 4623 4702 -1444 1719 159 26 26 chr20 4449373 4449675 -62218330 + AluJb SINE Alu 1 302 -10 1260 254 40 27 chr20 4449675 4449948 -62218057 + L1MC4a LINE L1 4702 4986 -1160 2322 208 18 18 chr20 4449948 4450453 -62217552 + L1PA16 LINE L1 5657 6161 -5 1260 254 40 27 chr20 4450453 4450497 -62217508 + L1MC4a LINE L1 4986 5028 -1118 2342 95 7 0 chr20 4450741 4451047 -62216958 + AluSp SINE Alu 1 308 -5 2359 113 0 0 chr20 4451465 4451775 -62216230 - AluSx SINE Alu -2 310 1 234 205 145 24 chr20 4451780 4451863 -62216142 + MIR SINE MIR 61 153 -55 1760 130 23 0 chr20 4453094 4453356 -62214649 - AluSx SINE Alu -13 299 32 2379 106 3 3 chr20 4453856 4454168 -62213837 + AluSq SINE Alu 1 312 -1 184 250 0 0 chr20 4454260 4454304 -62213701 + MIR SINE MIR 61 104 -104 435 320 74 25 chr20 4454635 4454879 -62213126 + L1MC4a LINE L1 5391 5646 -2162 290 235 51 31 chr20 4454934 4455032 -62212973 + L1MC4a LINE L1 5862 5961 -1847 23 0 0 0 chr20 4455182 4455205 -62212800 + AT_rich Low_complexity Low_complexity 1 23 0 345 294 18 29 chr20 4455840 4456010 -62211995 + GA-rich Low_complexity Low_complexity 5 172 0 585 243 28 34 chr20 4457315 4457492 -62210513 + LTR16A1 LTR ERVL 282 457 0 1982 131 14 0 chr20 4457586 4457869 -62210136 - AluSx SINE Alu -25 287 1 198 254 18 0 chr20 4458453 4458508 -62209497 - L2 LINE L2 -1 3271 3216 314 318 170 35 chr20 4459361 4459854 -62208151 - L2 LINE L2 -782 2532 1942 1362 178 100 92 chr20 4459854 4460224 -62207781 + MLT1A2 LTR MaLR 1 373 -1 314 318 170 35 chr20 4460224 4460330 -62207675 - L2 LINE L2 -1372 1942 1852 1754 161 3 40 chr20 4461739 4462038 -62205967 - AluJo SINE Alu -24 288 1 276 262 159 16 chr20 4462485 4462611 -62205394 + MIR SINE MIR 2 145 -117 3686 147 2 2 chr20 4462685 4463258 -62204747 + L1PA16 LINE L1 5585 6157 -9 2242 122 3 6 chr20 4463260 4463571 -62204434 + AluSx SINE Alu 1 310 -2 1887 182 8 32 chr20 4464405 4464779 -62203226 - MLT1A1 LTR MaLR 0 365 1 207 271 0 0 chr20 4465293 4465341 -62202664 + L2 LINE L2 3217 3264 -8 1148 203 206 30 chr20 4465741 4466076 -62201929 + MSTD LTR MaLR 1 394 -2 296 209 0 0 chr20 4467331 4467398 -62200607 - L1MC1 LINE L1 -4 6329 6263 750 253 65 65 chr20 4467412 4467673 -62200332 - MER77 LTR ERV1 -291 314 54 1691 292 107 20 chr20 4468088 4469361 -62198644 + L1ME4a LINE L1 2877 4260 -1886 279 250 75 66 chr20 4469763 4469900 -62198105 + L1ME4a LINE L1 5858 5999 -122 2189 118 10 0 chr20 4469900 4470197 -62197808 + AluSx SINE Alu 5 304 -8 279 250 75 66 chr20 4470197 4470287 -62197718 + L1ME4a LINE L1 5999 6087 -34 270 224 0 0 chr20 4471576 4471625 -62196380 - MER91 DNA MER1_type -3 137 89 589 256 26 6 chr20 4472114 4472270 -62195735 - MIR SINE MIR 0 262 104 369 178 204 25 chr20 4472319 4472468 -62195537 + MLT1H LTR MaLR 53 310 -239 383 226 151 95 chr20 4472744 4473049 -62194956 - MER90 LTR ERV1 -219 356 35 274 30 0 0 chr20 4473552 4473585 -62194420 + MADE1 DNA Mariner 6 38 -42 251 266 32 21 chr20 4474319 4474413 -62193592 + HAL1b LINE L1 469 563 -785 388 85 34 0 chr20 4474419 4474478 -62193527 - MLT2C1 LTR ERVL 0 520 460 251 158 58 42 chr20 4474479 4474599 -62193406 + (TATAA)n Simple_repeat Simple_repeat 4 125 0 224 137 69 8 chr20 4474645 4474776 -62193229 + (TA)n Simple_repeat Simple_repeat 2 140 0 222 191 0 0 chr20 4474797 4474844 -62193161 + (TATG)n Simple_repeat Simple_repeat 2 48 0 1776 160 66 0 chr20 4474973 4475292 -62192713 - MLT2C1 LTR ERVL -57 340 1 1253 134 0 0 chr20 4475336 4475508 -62192497 + AluSp SINE Alu 134 305 -8 22 0 0 0 chr20 4475878 4475900 -62192105 + AT_rich Low_complexity Low_complexity 1 22 0 909 190 0 22 chr20 4476022 4476201 -62191804 + MER5B DNA MER1_type 4 178 0 214 242 0 16 chr20 4476349 4476411 -62191594 + MER5A DNA MER1_type 9 69 -120 3459 154 43 60 chr20 4476548 4477251 -62190754 + LTR8 LTR ERV1 1 691 0 322 380 68 30 chr20 4477352 4477569 -62190436 + L2 LINE L2 2850 3088 -184 5366 76 18 7 chr20 4477569 4478303 -62189702 + L1PA13 LINE L1 5419 6160 -3 322 380 68 30 chr20 4478303 4478451 -62189554 + L2 LINE L2 3088 3229 -43 1301 254 80 15 chr20 4479423 4479900 -62188105 + HAL1 LINE L1 1705 2212 -295 5357 136 12 16 chr20 4479963 4480809 -62187196 + MER4D LTR ERV1 62 903 0 377 289 122 31 chr20 4480809 4481529 -62186476 - L1M4 LINE L1 -748 5398 4613 267 165 66 11 chr20 4481559 4481650 -62186355 + (TTAAA)n Simple_repeat Simple_repeat 4 99 0 254 291 108 55 chr20 4481711 4482109 -62185896 + L1 LINE L1 2409 2827 -3319 277 296 49 0 chr20 4482154 4482235 -62185770 + MER5A DNA MER1_type 10 94 -95 928 322 61 70 chr20 4482306 4482438 -62185567 + L1 LINE L1 2932 3064 -3082 2319 75 7 0 chr20 4482438 4482764 -62185241 - AluSp SINE Alu 0 328 1 928 322 61 70 chr20 4482764 4483573 -62184432 + L1 LINE L1 3064 3868 -2278 2108 128 67 22 chr20 4483573 4483932 -62184073 + THE1C LTR MaLR 1 375 0 928 322 61 70 chr20 4483932 4483992 -62184013 + L1 LINE L1 3868 3927 -2219 408 334 52 30 chr20 4484032 4484436 -62183569 + L1 LINE L1 4067 4479 -1667 882 283 111 24 chr20 4484519 4484943 -62183062 + MLT1L LTR MaLR 155 615 0 351 269 155 56 chr20 4485269 4485715 -62182290 - L1M4 LINE L1 -2919 3227 2738 1432 286 46 21 chr20 4486465 4486941 -62181064 + LTR16C LTR ERVL 4 491 0 180 364 81 62 chr20 4487449 4487658 -62180347 + L2 LINE L2 3030 3242 -30 1144 240 86 26 chr20 4488079 4488923 -62179082 + L1MEc LINE L1 1951 2896 -3319 272 293 55 67 chr20 4491347 4491615 -62176390 + MIR3 SINE MIR 3 259 -3 228 259 129 24 chr20 4492676 4492761 -62175244 + L2 LINE L2 2885 2978 -294 189 289 0 0 chr20 4492868 4492920 -62175085 - L3b LINE CR1 -3 1580 1529 360 0 0 0 chr20 4493080 4493120 -62174885 + (CA)n Simple_repeat Simple_repeat 2 41 0 1170 151 16 0 chr20 4494247 4494433 -62173572 + AluSg/x SINE Alu 104 292 -20 818 179 68 6 chr20 4494500 4494662 -62173343 - LTR37B LTR ERV1 -289 179 8 506 317 85 55 chr20 4495260 4495717 -62172288 + L2 LINE L2 2817 3287 -26 184 297 0 68 chr20 4495870 4495944 -62172061 + L2 LINE L2 3204 3272 0 193 204 250 0 chr20 4496166 4496254 -62171751 + MIR3 SINE MIR 3 112 -96 5976 60 23 4 chr20 4496452 4497204 -62170801 - MER4E LTR ERV1 0 766 1 1827 147 18 0 chr20 4497288 4497574 -62170431 - AluJo SINE Alu -21 291 1 22 0 0 0 chr20 4497597 4497619 -62170386 + AT_rich Low_complexity Low_complexity 1 22 0 789 72 0 0 chr20 4497619 4497716 -62170289 - L1PA6 LINE L1 -7 6147 6051 5094 174 38 35 chr20 4498469 4499645 -62168360 + L1MA9 LINE L1 5127 6312 0 22 56 0 0 chr20 4499771 4499807 -62168198 + AT_rich Low_complexity Low_complexity 1 36 0 208 250 19 0 chr20 4500017 4500069 -62167936 + (TG)n Simple_repeat Simple_repeat 2 54 0 584 274 150 0 chr20 4500867 4501020 -62166985 - MER5A DNA MER1_type 0 189 14 255 303 68 68 chr20 4501363 4501525 -62166480 + MIR SINE MIR 31 192 -70 280 252 0 103 chr20 4501956 4502063 -62165942 + MER117 DNA MER1_type 2 97 -100 189 188 0 83 chr20 4502365 4502413 -62165592 - L2 LINE L2 -18 3295 3252 417 109 0 0 chr20 4502874 4502938 -62165067 + (T)n Simple_repeat Simple_repeat 1 64 0 240 335 36 85 chr20 4503367 4503839 -62164166 + L2 LINE L2 2817 3265 -7 1699 251 97 40 chr20 4503891 4504573 -62163432 - MER21B LTR ERV1 -130 733 13 729 252 34 101 chr20 4504653 4505097 -62162908 + L1ME4a LINE L1 5491 5904 -217 329 193 165 0 chr20 4505101 4505210 -62162795 + L1ME4a LINE L1 5993 6119 -2 3503 211 62 16 chr20 4505966 4506820 -62161185 + MER97a DNA MER1_type 2 894 0 378 279 93 31 chr20 4507005 4507166 -62160839 + MIR SINE MIR 16 186 -76 390 326 31 0 chr20 4507915 4508044 -62159961 - MER94 DNA DNA -1 133 1 2115 113 3 35 chr20 4508140 4508450 -62159555 + AluSx SINE Alu 1 300 -12 322 304 45 0 chr20 4509073 4509185 -62158820 - MER103 DNA DNA -47 119 3 558 229 16 100 chr20 4510225 4510349 -62157656 - MLT1H LTR MaLR -25 406 273 243 0 0 0 chr20 4510349 4510376 -62157629 + (CTGGGG)n Simple_repeat Simple_repeat 3 29 0 558 229 16 100 chr20 4510376 4510674 -62157331 - MLT1H LTR MaLR -158 273 1 1149 203 0 5 chr20 4512277 4512484 -62155521 + MER3 DNA MER1_type 2 207 -2 1543 231 73 86 chr20 4513787 4514386 -62153619 - MER77 LTR ERV1 -1 604 41 365 314 123 8 chr20 4514391 4514643 -62153362 + L1ME3 LINE L1 4960 5240 -906 236 186 23 0 chr20 4514732 4514775 -62153230 + L1P5 LINE L1 5529 5572 -584 379 316 204 16 chr20 4514845 4515149 -62152856 + L1MC4a LINE L1 5626 5986 -1822 1707 291 53 17 chr20 4515323 4515924 -62152081 + MLT2E LTR ERVL 6 628 0 231 158 50 0 chr20 4515940 4516053 -62151952 + (TA)n Simple_repeat Simple_repeat 2 123 -4 186 71 0 0 chr20 4516053 4516081 -62151924 + (TG)n Simple_repeat Simple_repeat 1 28 0 231 158 50 0 chr20 4516081 4516087 -62151918 + (TA)n Simple_repeat Simple_repeat 123 127 0 39598 81 6 8 chr20 4516555 4522706 -62145299 - L1PA6 LINE L1 -3 6151 11 302 246 220 34 chr20 4522728 4522846 -62145159 - MIR SINE MIR -70 192 53 314 267 75 54 chr20 4523102 4523350 -62144655 - MLT1H LTR MaLR -137 272 19 2202 241 72 16 chr20 4523517 4524073 -62143932 - MLT1G1 LTR MaLR -8 587 1 469 266 83 52 chr20 4524442 4524634 -62143371 - MIR SINE MIR -6 256 59 723 210 14 0 chr20 4525041 4525179 -62142826 + MER5B DNA MER1_type 39 178 0 314 201 93 50 chr20 4525321 4525460 -62142545 + L2 LINE L2 3076 3220 -93 287 297 54 0 chr20 4525462 4525536 -62142469 - MER91C DNA MER1_type -32 108 31 437 283 38 0 chr20 4525542 4525648 -62142357 + L2 LINE L2 3203 3312 -1 336 119 0 0 chr20 4525733 4525792 -62142213 + (CAT)n Simple_repeat Simple_repeat 3 61 0 291 309 12 12 chr20 4525929 4526010 -62141995 + MIR SINE MIR 29 109 -153 325 173 58 10 chr20 4526075 4526173 -62141832 + L1ME3 LINE L1 5367 5478 -722 802 271 123 17 chr20 4526176 4526609 -62141396 - MLT1J2 LTR MaLR 0 450 1 421 338 82 17 chr20 4526610 4527027 -62140978 + L1ME3 LINE L1 5486 5929 -233 201 231 0 0 chr20 4527129 4527168 -62140837 + GA-rich Low_complexity Low_complexity 3 41 0 2897 179 9 38 chr20 4527240 4527820 -62140185 + L1MB4 LINE L1 5618 6180 0 429 253 126 44 chr20 4528846 4529028 -62138977 + MIR SINE MIR 63 259 -3 1965 208 177 31 chr20 4529193 4529809 -62138196 - MER21B LTR ERV1 -124 739 34 197 284 45 15 chr20 4529945 4530012 -62137993 + MIR3 SINE MIR 114 182 -26 2872 198 109 28 chr20 4530178 4530967 -62137038 - L1ME3 LINE L1 0 6162 5310 210 302 0 31 chr20 4531007 4531103 -62136902 - MIR SINE MIR -70 192 100 1764 236 106 6 chr20 4531907 4532468 -62135537 - L1ME3 LINE L1 -80 6082 5468 310 229 51 76 chr20 4533065 4533183 -62134822 + L2 LINE L2 3158 3272 0 296 265 102 65 chr20 4533389 4533634 -62134371 + L2 LINE L2 2288 2541 -773 230 343 0 0 chr20 4533610 4533680 -62134325 - L2 LINE L2 0 3313 3244 * 205 314 0 0 chr20 4534568 4534619 -62133386 + polypyrimidine Low_complexity Low_complexity 1 51 0 467 255 113 14 chr20 4535745 4535886 -62132119 - MIR SINE MIR -103 159 5 283 219 135 0 chr20 4535918 4536014 -62131991 + MIR SINE MIR 146 254 -8 180 182 0 0 chr20 4536055 4536099 -62131906 + GA-rich Low_complexity Low_complexity 3 46 0 1947 148 3 16 chr20 4536948 4537253 -62130752 - AluJb SINE Alu -11 301 1 407 200 200 21 chr20 4537399 4537539 -62130466 - MIR SINE MIR -14 248 84 2475 74 0 0 chr20 4538433 4538732 -62129273 - AluSg SINE Alu -11 299 1 510 230 146 6 chr20 4538732 4538910 -62129095 - Charlie4a DNA MER1_type -8 500 298 752 242 204 4 chr20 4538910 4539179 -62128826 - MER5C DNA MER1_type 0 324 2 899 231 60 40 chr20 4539181 4539479 -62128526 - Charlie4a DNA MER1_type -204 304 1 270 336 92 0 chr20 4539939 4540058 -62127947 - MIR SINE MIR -15 247 118 2580 228 3 17 chr20 4541194 4541897 -62126108 + L1MB5 LINE L1 4068 4760 -1386 3733 175 64 41 chr20 4541922 4543429 -62124576 + MER52A LTR ERV1 1 1755 0 1810 198 18 11 chr20 4543429 4543878 -62124127 + L1MB5 LINE L1 4773 5224 -922 277 40 60 20 chr20 4543878 4543928 -62124077 + T-rich Low_complexity Low_complexity 1 52 0 2569 43 0 0 chr20 4543928 4544253 -62123752 - L1PA4 LINE L1 -24 6131 5807 2970 205 28 2 chr20 4544256 4545154 -62122851 + L1MB5 LINE L1 5219 6166 -8 745 239 72 5 chr20 4545260 4545469 -62122536 - Charlie4 DNA MER1_type -1666 295 73 1060 228 9 9 chr20 4545617 4545841 -62122164 + MER58A DNA MER1_type 1 224 0 25 0 0 0 chr20 4546005 4546030 -62121975 + AT_rich Low_complexity Low_complexity 1 25 0 273 324 30 0 chr20 4546047 4546182 -62121823 + L1MDa LINE L1 34 618 -5912 913 235 71 45 chr20 4546407 4546437 -62121568 - MLT2B3 LTR ERVL -10 544 516 531 0 0 0 chr20 4546437 4546496 -62121509 + (TAGA)n Simple_repeat Simple_repeat 2 60 0 913 235 71 45 chr20 4546496 4546733 -62121272 - MLT2B3 LTR ERVL -38 516 270 546 235 38 0 chr20 4546885 4547017 -62120988 + MLT1A2 LTR MaLR 238 374 0 2543 243 41 28 chr20 4547017 4547818 -62120187 + L1ME1 LINE L1 5338 6149 -17 1779 214 31 31 chr20 4547855 4548309 -62119696 + L1MA9 LINE L1 8 461 -6569 2444 219 5 21 chr20 4548357 4549013 -62118992 + L1MA9 LINE L1 1829 2473 -4564 * 8876 172 72 32 chr20 4549004 4551612 -62116393 + L1MA9 LINE L1 4075 6801 -471 465 66 0 0 chr20 4551612 4551673 -62116332 + (CA)n Simple_repeat Simple_repeat 1 61 0 8876 172 72 32 chr20 4551673 4552150 -62115855 + L1MA9 LINE L1 6801 7258 -14 2007 120 29 0 chr20 4552272 4552581 -62115424 + AluSx SINE Alu 1 317 0 226 366 114 13 chr20 4552716 4552943 -62115062 + L2 LINE L2 2804 3053 -219 3022 92 2 31 chr20 4553479 4553935 -62114070 + L1PA13 LINE L1 5702 6144 -19 277 345 45 0 chr20 4553944 4554054 -62113951 - MIR SINE MIR -57 151 37 193 150 0 50 chr20 4554068 4554128 -62113877 + (TTTC)n Simple_repeat Simple_repeat 3 59 0 257 320 87 0 chr20 4554939 4555042 -62112963 - MIR SINE MIR -32 230 119 2274 190 66 34 chr20 4555073 4555525 -62112480 - L1MB7 LINE L1 -277 5907 5471 1888 181 3 0 chr20 4555525 4555823 -62112182 - AluJo SINE Alu -13 299 1 2274 190 66 34 chr20 4555823 4555949 -62112056 - L1MB7 LINE L1 -713 5471 5351 2157 112 7 0 chr20 4555949 4556244 -62111761 - AluSx SINE Alu -15 297 1 2274 190 66 34 chr20 4556244 4556334 -62111671 - L1MB7 LINE L1 -833 5351 5207 862 196 61 17 chr20 4556331 4556561 -62111444 + L1MB7 LINE L1 5940 6179 -5 * 27 0 0 0 chr20 4556801 4556828 -62111177 + AT_rich Low_complexity Low_complexity 1 27 0 8644 168 19 23 chr20 4556835 4559036 -62108969 + L1MA9 LINE L1 3471 5680 -632 2257 110 0 0 chr20 4559036 4559336 -62108669 + AluSx SINE Alu 1 300 -12 2212 131 0 0 chr20 4559336 4559648 -62108357 + AluSx SINE Alu 1 312 0 8644 168 19 23 chr20 4559648 4560048 -62107957 + L1MA9 LINE L1 5678 6064 -248 264 105 0 0 chr20 4560048 4560086 -62107919 + LTR16C LTR ERVL 454 491 0 250 255 51 31 chr20 4560894 4560992 -62107013 - LTR67 LTR ERVL -47 510 411 1118 288 33 40 chr20 4561517 4561940 -62106065 + LTR16C LTR ERVL 51 470 -21 514 269 35 46 chr20 4562213 4562410 -62105595 - ERVL LTR ERVL -1106 4658 4464 1144 344 44 24 chr20 4562790 4563659 -62104346 - ERVL LTR ERVL -1716 3938 3053 24 53 0 0 chr20 4563827 4563865 -62104140 + AT_rich Low_complexity Low_complexity 1 38 0 447 244 23 54 chr20 4564009 4564230 -62103775 - L1M4 LINE L1 -2593 3553 3340 4312 166 35 14 chr20 4564231 4564399 -62103606 - L1MA10 LINE L1 -2 6332 6169 315 0 0 0 chr20 4564399 4564434 -62103571 + (TG)n Simple_repeat Simple_repeat 1 35 0 4312 166 35 14 chr20 4564434 4565123 -62102882 - L1MA10 LINE L1 -165 6169 5457 6215 211 18 9 chr20 4565123 4566492 -62101513 - L1MA10 LINE L1 -2106 4040 2655 1499 104 45 0 chr20 4566492 4566712 -62101293 + MER30 DNA MER1_type 1 230 0 6215 211 18 9 chr20 4566712 4566809 -62101196 - L1MA10 LINE L1 -3491 2655 2560 1496 221 63 49 chr20 4566816 4567031 -62100974 - MER74A LTR ERVL 0 558 348 420 97 0 0 chr20 4567031 4567093 -62100912 + (TG)n Simple_repeat Simple_repeat 1 62 0 1496 221 63 49 chr20 4567093 4567371 -62100634 - MER74A LTR ERVL -210 348 58 345 198 99 12 chr20 4567387 4567468 -62100537 - MER74A LTR ERVL -470 88 1 265 216 9 54 chr20 4567498 4567609 -62100396 - L1M4 LINE L1 -2846 3300 3195 483 270 69 29 chr20 4567864 4568038 -62099967 + MER5A DNA MER1_type 6 186 -3 624 275 11 11 chr20 4569156 4569334 -62098671 - MIR SINE MIR 0 262 85 1823 231 59 12 chr20 4569334 4569840 -62098165 - MLT1H LTR MaLR 0 549 20 216 0 0 0 chr20 4569843 4569867 -62098138 + (T)n Simple_repeat Simple_repeat 1 24 0 351 366 0 8 chr20 4570826 4570957 -62097048 + MIR3 SINE MIR 64 193 -15 447 218 0 0 chr20 4570957 4571058 -62096947 + CT-rich Low_complexity Low_complexity 1 101 0 1155 81 0 27 chr20 4571058 4571243 -62096762 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1361 159 0 17 chr20 4571292 4571524 -62096481 - AluJb SINE Alu -83 229 2 338 197 26 0 chr20 4571867 4571943 -62096062 + Charlie2 DNA MER1_type 67 144 -2718 21 89 0 0 chr20 4572023 4572079 -62095926 + AT_rich Low_complexity Low_complexity 1 56 0 444 280 188 14 chr20 4572093 4572375 -62095630 + Charlie2 DNA MER1_type 251 581 -2201 359 337 88 0 chr20 4572377 4572558 -62095447 + Charlie2b DNA MER1_type 474 670 -2112 4202 202 53 31 chr20 4572627 4573951 -62094054 + Charlie2a DNA MER1_type 1466 2818 -44 433 291 9 1 chr20 4575369 4575496 -62092509 + MIR SINE MIR 31 157 -69 573 269 164 39 chr20 4577096 4577590 -62090415 + L1MC/D LINE L1 2687 3242 -2904 338 225 11 56 chr20 4577677 4577766 -62090239 + MLT1J LTR MaLR 104 188 -323 262 273 31 37 chr20 4577772 4577933 -62090072 + L1MC/D LINE L1 5327 5486 -2322 632 262 61 0 chr20 4577940 4578104 -62089901 - MIR SINE MIR 0 262 89 472 306 86 4 chr20 4578107 4578339 -62089666 + L1MC/D LINE L1 5487 5737 -2071 5604 206 52 11 chr20 4578459 4580884 -62087121 + L1MC3 LINE L1 4024 5403 -743 339 46 11 218 chr20 4580909 4580970 -62087035 + L1MC3 LINE L1 6882 6922 -863 3803 169 35 3 chr20 4580970 4581686 -62086319 - L1MD1 LINE L1 0 6242 5504 339 46 11 218 chr20 4581686 4581711 -62086294 + L1MC3 LINE L1 6922 6950 -835 341 307 24 0 chr20 4581716 4581843 -62086162 - LTR33 LTR ERVL -391 130 1 1345 255 67 80 chr20 4582272 4582958 -62085047 - MER21B LTR ERV1 -150 713 35 268 270 119 16 chr20 4584407 4584533 -62083472 - L2 LINE L2 0 3272 3134 629 239 103 97 chr20 4585005 4585344 -62082661 - MLT1H LTR MaLR 0 549 209 1500 254 17 0 chr20 4585347 4585702 -62082303 + MLT1E2-int LTR MaLR 246 606 -765 928 233 35 170 chr20 4585935 4586601 -62081404 + MLT1E2-int LTR MaLR 692 1267 -104 690 167 25 0 chr20 4586617 4586737 -62081268 - L1MB1 LINE L1 0 6168 6046 3431 150 43 29 chr20 4586737 4586872 -62081133 + L1MB1 LINE L1 5352 5484 -684 2186 118 0 16 chr20 4586872 4587176 -62080829 + AluSx SINE Alu 1 299 -13 3431 150 43 29 chr20 4587176 4587695 -62080310 + L1MB1 LINE L1 5484 6015 -153 486 236 49 0 chr20 4587700 4587823 -62080182 + MLT1E2-int LTR MaLR 1243 1371 0 2228 210 87 19 chr20 4587905 4588444 -62079561 + MLT1E2 LTR MaLR 51 626 0 717 182 135 0 chr20 4588444 4588592 -62079413 - MLT1H LTR MaLR -341 208 41 2019 165 91 10 chr20 4589795 4590189 -62077816 - MSTB LTR MaLR 0 426 1 1248 117 12 0 chr20 4591112 4591283 -62076722 - AluSg/x SINE Alu -16 296 124 243 237 92 13 chr20 4591339 4591415 -62076590 - MLT1H LTR MaLR -15 580 499 * 584 279 49 102 chr20 4591411 4591714 -62076291 - MLT1H LTR MaLR -195 354 70 2457 177 19 2 chr20 4591714 4592133 -62075872 - MSTB LTR MaLR 0 426 1 584 279 49 102 chr20 4592133 4592173 -62075832 - MLT1H LTR MaLR -479 70 29 276 312 85 38 chr20 4592222 4592541 -62075464 - L2 LINE L2 -251 3062 2719 604 314 108 23 chr20 4592556 4592983 -62075022 - MLT1L LTR MaLR -14 601 139 403 237 69 15 chr20 4593081 4593212 -62074793 - MLT1L LTR MaLR -410 139 2 183 100 0 0 chr20 4593240 4593270 -62074735 + (CA)n Simple_repeat Simple_repeat 2 31 0 1198 283 57 31 chr20 4593364 4593680 -62074325 - MLT1D LTR MaLR 0 505 170 1305 118 62 153 chr20 4593680 4594019 -62073986 - AluYb8 SINE Alu 0 308 1 1198 283 57 31 chr20 4594019 4594190 -62073815 - MLT1D LTR MaLR -335 170 5 199 348 61 17 chr20 4595202 4595317 -62072688 + MIR SINE MIR 34 153 -55 842 243 82 12 chr20 4595326 4595569 -62072436 + Charlie4a DNA MER1_type 4 263 -245 750 150 50 0 chr20 4595577 4595697 -62072308 + FLAM_C SINE Alu 2 127 -16 437 233 61 22 chr20 4595714 4595894 -62072111 + Charlie4a DNA MER1_type 253 439 -69 2294 120 0 0 chr20 4595941 4596250 -62071755 + AluSx SINE Alu 1 309 -3 311 275 44 9 chr20 4596333 4596448 -62071557 - MIR SINE MIR -87 121 2 679 261 124 0 chr20 4596476 4596710 -62071295 + L2 LINE L2 1441 1703 -1611 1674 206 102 80 chr20 4596715 4597184 -62070821 - MLT1F LTR MaLR -2 540 56 2262 119 51 20 chr20 4597184 4597537 -62070468 + THE1B LTR MaLR 1 364 0 1674 206 102 80 chr20 4597537 4597595 -62070410 - MLT1F LTR MaLR -486 56 1 1239 248 65 3 chr20 4597595 4597934 -62070071 + L2 LINE L2 1708 2067 -1247 282 283 91 36 chr20 4597994 4598213 -62069792 + HAL1 LINE L1 2014 2244 -263 416 194 32 0 chr20 4598228 4598321 -62069684 + HAL1 LINE L1 2296 2391 -116 747 277 130 36 chr20 4598843 4599713 -62068292 + L1MEc LINE L1 805 1651 -4564 567 108 0 0 chr20 4600935 4601028 -62066977 + (TTCC)n Simple_repeat Simple_repeat 2 94 0 2097 127 0 10 chr20 4601028 4601328 -62066677 - AluSx SINE Alu -15 297 1 2390 99 0 0 chr20 4601483 4601777 -62066228 + AluY SINE Alu 1 294 -17 286 252 153 0 chr20 4602421 4602552 -62065453 - L2 LINE L2 -2 3311 3161 363 305 163 17 chr20 4602816 4603049 -62064956 + LTR16C LTR ERVL 223 489 -2 585 355 59 20 chr20 4603114 4603167 -62064838 - L2 LINE L2 -199 3073 3024 2284 112 0 0 chr20 4603167 4603472 -62064533 + AluSx SINE Alu 1 305 -7 585 355 59 20 chr20 4603472 4603985 -62064020 - L2 LINE L2 -248 3024 2490 231 218 0 0 chr20 4604260 4604315 -62063690 + (ATG)n Simple_repeat Simple_repeat 2 56 0 2016 93 0 35 chr20 4604425 4604728 -62063277 + L1PA13 LINE L1 5862 6155 -8 2221 116 0 0 chr20 4604728 4605022 -62062983 - AluSx SINE Alu -18 294 1 206 301 19 78 chr20 4605074 4605177 -62062828 - L2 LINE L2 -621 2693 2597 888 267 94 1 chr20 4605183 4605607 -62062398 + LTR16C LTR ERVL 1 491 0 2348 194 67 9 chr20 4605935 4606471 -62061534 - MLT1F1 LTR MaLR 0 567 1 678 190 0 0 chr20 4606555 4606671 -62061334 + FRAM SINE Alu 41 156 -20 416 180 0 11 chr20 4606676 4606765 -62061240 + GA-rich Low_complexity Low_complexity 2 89 0 23 0 0 0 chr20 4607207 4607230 -62060775 + AT_rich Low_complexity Low_complexity 1 23 0 1481 240 63 30 chr20 4608209 4608531 -62059474 + Charlie4a DNA MER1_type 2 347 -1614 2155 116 0 14 chr20 4608531 4608825 -62059180 - AluSx SINE Alu -22 290 1 1481 240 63 30 chr20 4608825 4608993 -62059012 + Charlie4a DNA MER1_type 347 508 0 340 302 98 33 chr20 4609419 4609553 -62058452 - L1ME4a LINE L1 -161 5960 5836 2321 65 27 14 chr20 4609553 4609846 -62058159 + AluY SINE Alu 1 297 -14 340 302 98 33 chr20 4609846 4609956 -62058049 - L1ME4a LINE L1 -285 5836 5700 2296 117 0 0 chr20 4609956 4610254 -62057751 + AluSx SINE Alu 1 298 -14 252 232 87 0 chr20 4610296 4610365 -62057640 - MER116 DNA Mariner 0 80 6 338 310 86 76 chr20 4610382 4611082 -62056923 - L1ME4a LINE L1 -1316 4830 4124 1854 161 22 12 chr20 4611151 4611475 -62056530 + MLT1A1 LTR MaLR 39 365 0 22 35 0 0 chr20 4611684 4611713 -62056292 + AT_rich Low_complexity Low_complexity 1 29 0 305 265 68 0 chr20 4613918 4614035 -62053970 + MIR SINE MIR 100 224 -38 252 290 21 21 chr20 4614104 4614197 -62053808 + LTR16C LTR ERVL 79 171 -320 258 154 0 58 chr20 4614219 4614271 -62053734 - MLT2B1 LTR ERVL -8 512 464 249 246 0 0 chr20 4614273 4614338 -62053667 + (TATG)n Simple_repeat Simple_repeat 4 68 0 1339 206 148 35 chr20 4614344 4614775 -62053230 - MLT2B1 LTR ERVL -40 480 1 265 309 36 0 chr20 4614844 4614954 -62053051 + LTR16C LTR ERVL 349 462 -29 375 271 19 94 chr20 4616375 4616460 -62051545 - L1ME3A LINE L1 -234 5936 5846 2267 92 0 17 chr20 4616460 4616755 -62051250 - AluSx SINE Alu -20 292 3 375 271 19 94 chr20 4616755 4616935 -62051070 - L1ME3A LINE L1 -324 5846 5691 24 0 0 0 chr20 4617084 4617108 -62050897 + AT_rich Low_complexity Low_complexity 1 24 0 292 267 37 84 chr20 4617310 4617501 -62050504 - L1ME4a LINE L1 -3289 2857 2676 5392 119 19 57 chr20 4617507 4618582 -62049423 + L1PA12 LINE L1 5130 6168 0 181 163 41 0 chr20 4618616 4618665 -62049340 + CT-rich Low_complexity Low_complexity 2 52 0 2195 121 16 0 chr20 4618791 4619098 -62048907 - AluSx SINE Alu 0 312 1 370 340 111 17 chr20 4619145 4619442 -62048563 - L1ME4a LINE L1 -3600 2546 2222 5777 63 7 0 chr20 4619676 4620391 -62047614 - L1PA8 LINE L1 -1 6171 5452 267 182 105 127 chr20 4620785 4620966 -62047039 + MER104 DNA Tc2 1 177 -3 535 283 93 20 chr20 4621017 4621411 -62046594 - L1MDa LINE L1 -742 2159 1636 2220 115 7 0 chr20 4621621 4621916 -62046089 - AluSx SINE Alu -15 297 1 1172 188 43 59 chr20 4623505 4623808 -62044197 + AluJo SINE Alu 1 298 -4 276 119 0 0 chr20 4624973 4625015 -62042990 - AluJo SINE Alu -11 291 250 1215 185 4 89 chr20 4625035 4625316 -62042689 - AluJo SINE Alu -53 259 3 256 312 102 62 chr20 4625519 4625970 -62042035 - L1M4 LINE L1 -1003 5143 4712 1176 142 49 0 chr20 4625970 4626175 -62041830 - L1MA7 LINE L1 0 6291 6077 256 312 102 62 chr20 4626175 4626796 -62041209 - L1M4 LINE L1 -1434 4712 4027 824 176 149 5 chr20 4626925 4627113 -62040892 - AluJo SINE Alu -11 301 87 231 321 149 15 chr20 4627208 4627342 -62040663 + MIR SINE MIR 105 256 -6 2225 105 0 0 chr20 4627369 4627698 -62040307 - AluSq SINE Alu 0 329 1 447 104 15 0 chr20 4627740 4627807 -62040198 - MER41A LTR ERV1 -88 466 399 22 70 0 0 chr20 4627903 4627946 -62040059 + AT_rich Low_complexity Low_complexity 1 43 0 1455 101 22 40 chr20 4628324 4628552 -62039453 + AluSx SINE Alu 2 225 -87 689 229 108 54 chr20 4628635 4628932 -62039073 + L2 LINE L2 2995 3307 -6 351 213 0 0 chr20 4629194 4629274 -62038731 + (CA)n Simple_repeat Simple_repeat 1 80 0 637 235 117 5 chr20 4629490 4629703 -62038302 - MER115 DNA AcHobo 0 693 457 754 274 36 15 chr20 4629752 4630026 -62037979 - MER115 DNA AcHobo -322 371 92 699 156 0 0 chr20 4630641 4630750 -62037255 + L1MB5 LINE L1 6065 6173 -1 2234 132 3 0 chr20 4630758 4631068 -62036937 + AluSx SINE Alu 1 311 -1 1133 68 28 6 chr20 4631101 4631277 -62036728 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 211 122 24 0 chr20 4632283 4632324 -62035681 - L2 LINE L2 -556 2758 2717 846 228 53 0 chr20 4632336 4632542 -62035463 + MIR SINE MIR 12 228 -34 225 167 39 26 chr20 4633091 4633169 -62034836 + GA-rich Low_complexity Low_complexity 1 79 0 792 263 24 0 chr20 4633187 4633400 -62034605 + MIR SINE MIR 12 229 -33 2155 77 7 28 chr20 4633706 4633993 -62034012 + AluSx SINE Alu 1 281 -31 450 0 0 0 chr20 4633998 4634048 -62033957 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 271 32 0 0 chr20 4634646 4634677 -62033328 - L1M2 LINE L1 -404 5887 5857 278 149 0 0 chr20 4634678 4634725 -62033280 + L1MA7 LINE L1 6239 6285 -6 180 0 0 0 chr20 4634725 4634745 -62033260 + (CCA)n Simple_repeat Simple_repeat 3 22 0 203 255 0 0 chr20 4635539 4635586 -62032419 + L2 LINE L2 3252 3298 -15 431 192 35 17 chr20 4635987 4636096 -62031909 - MLT1C LTR MaLR -337 130 18 1064 210 70 18 chr20 4636498 4636726 -62031279 - MLT1C LTR MaLR 0 467 228 2934 133 13 49 chr20 4636726 4637044 -62030961 - MER39B LTR ERV1 0 653 360 2781 91 3 5 chr20 4637044 4637417 -62030588 - THE1C LTR MaLR 0 375 4 2934 133 13 49 chr20 4637417 4637631 -62030374 - MER39B LTR ERV1 -293 360 140 1053 166 29 46 chr20 4637669 4637910 -62030095 - MLT1C LTR MaLR -230 237 1 829 254 57 32 chr20 4638032 4638347 -62029658 + L1MDa LINE L1 18 340 -6200 687 233 17 80 chr20 4638475 4638696 -62029309 + L1MDa LINE L1 843 1043 -5500 2085 122 3 25 chr20 4638696 4639016 -62028989 + AluSq SINE Alu 1 313 0 687 233 17 80 chr20 4639016 4639082 -62028923 + L1MDa LINE L1 1043 1112 -5431 1051 151 32 21 chr20 4639083 4639269 -62028736 - MER21B LTR ERV1 -14 849 662 2651 110 75 54 chr20 4639269 4639752 -62028253 - LTR26B LTR ERV1 -1 530 38 33065 103 15 60 chr20 4639769 4643826 -62024179 - L1PA7 LINE L1 0 6154 2498 2549 64 0 10 chr20 4643826 4644137 -62023868 - AluY SINE Alu -3 308 1 33065 103 15 60 chr20 4644137 4646519 -62021486 - L1PA7 LINE L1 -3656 2498 12 477 114 0 14 chr20 4646539 4646609 -62021396 - LTR26E LTR ERV1 -553 69 1 * 2484 216 68 22 chr20 4646609 4647154 -62020851 - MER21B LTR ERV1 -197 666 97 284 198 119 89 chr20 4647264 4647365 -62020640 - MER21B LTR ERV1 -758 105 2 3535 210 94 66 chr20 4647380 4647709 -62020296 + L1MDa LINE L1 1259 1577 -4963 1902 169 0 3 chr20 4647709 4648022 -62019983 + AluJb SINE Alu 1 312 0 3535 210 94 66 chr20 4648022 4648040 -62019965 + L1MDa LINE L1 1577 1593 -4947 2410 97 3 0 chr20 4648040 4648349 -62019656 + AluSx SINE Alu 1 310 -2 3535 210 94 66 chr20 4648349 4649291 -62018714 + L1MDa LINE L1 1593 2586 -3954 1327 127 131 23 chr20 4649279 4649538 -62018467 + L1MA6 LINE L1 6014 6300 0 * 1470 232 36 27 chr20 4649509 4649953 -62018052 + L1MDa LINE L1 2539 2986 -3554 818 164 0 8 chr20 4649960 4650088 -62017917 + AluJo SINE Alu 1 127 -185 1233 138 0 0 chr20 4651004 4651178 -62016827 + AluJo SINE Alu 129 302 -10 582 238 67 0 chr20 4651179 4651343 -62016662 + L1MDa LINE L1 2987 3161 -3379 8252 114 10 5 chr20 4652411 4653642 -62014363 + THE1C-int LTR MaLR 312 1580 0 2177 116 3 42 chr20 4653642 4653977 -62014028 + THE1C LTR MaLR 1 322 -53 2846 154 11 50 chr20 4653989 4654534 -62013471 + LTR26B LTR ERV1 1 524 -7 2691 126 20 0 chr20 4654610 4655006 -62012999 - LTR26 LTR ERV1 -199 404 1 223 318 119 13 chr20 4655114 4655350 -62012655 + L2 LINE L2 1565 1825 -1489 659 277 98 40 chr20 4655786 4656579 -62011426 + L2 LINE L2 2467 3309 -4 571 206 198 71 chr20 4656658 4657022 -62010983 + LTR16A1 LTR ERVL 11 420 -37 1636 176 10 30 chr20 4657027 4657328 -62010677 + AluJo SINE Alu 5 299 -13 248 233 14 0 chr20 4657351 4657424 -62010581 + GA-rich Low_complexity Low_complexity 3 76 0 232 214 36 0 chr20 4657640 4657696 -62010309 + GA-rich Low_complexity Low_complexity 1 58 0 1982 126 0 0 chr20 4658623 4658892 -62009113 - AluSx SINE Alu -43 269 1 1963 156 17 0 chr20 4659789 4660084 -62007921 + AluSx SINE Alu 3 302 -10 824 207 0 0 chr20 4660088 4660233 -62007772 - FRAM SINE Alu -30 146 2 1296 177 5 5 chr20 4660512 4660727 -62007278 + AluJo SINE Alu 84 298 -14 2046 187 58 85 chr20 4660727 4660899 -62007106 - MER92B LTR ERV1 -52 584 409 2233 116 0 19 chr20 4660899 4661217 -62006788 + AluSx SINE Alu 1 312 0 2046 187 58 85 chr20 4661217 4661474 -62006531 - MER92B LTR ERV1 -227 409 173 1977 139 39 18 chr20 4661474 4661804 -62006201 + MER1B DNA MER1_type 1 337 0 2046 187 58 85 chr20 4661804 4661973 -62006032 - MER92B LTR ERV1 -463 173 1 1413 268 48 21 chr20 4662363 4662974 -62005031 + L1M3d LINE L1 4 909 -4982 11023 130 7 13 chr20 4662975 4664654 -62003351 + Tigger1 DNA MER2_type 1 1669 -749 2362 126 59 45 chr20 4664656 4665078 -62002927 - MSTA LTR MaLR 0 428 1 1602 88 4 18 chr20 4665078 4665304 -62002701 - MSTA-int LTR MaLR 0 1580 1358 742 80 143 2 chr20 4665304 4665416 -62002589 - THE1B LTR MaLR -247 117 3 7097 151 17 12 chr20 4665418 4666565 -62001440 - THE1B-int LTR MaLR -1 1579 427 1096 156 0 0 chr20 4666571 4666738 -62001267 + AluSc SINE Alu 141 307 -2 658 138 0 0 chr20 4666738 4666832 -62001173 + Tigger1 DNA MER2_type 1739 1832 -586 531 158 0 0 chr20 4666857 4666939 -62001066 - Tigger5 DNA MER2_type -1 2322 2241 233 209 23 0 chr20 4666954 4666997 -62001008 + Tigger5 DNA MER2_type 1 44 -2279 4834 198 47 15 chr20 4666999 4667070 -62000935 + L1MB1 LINE L1 4134 4201 -1945 2077 143 0 0 chr20 4667070 4667364 -62000641 - AluSx SINE Alu -17 295 2 4834 198 47 15 chr20 4667364 4668391 -61999614 + L1MB1 LINE L1 4201 5268 -878 1431 196 0 4 chr20 4668391 4668621 -61999384 - MER8 DNA MER2_type 0 239 11 2977 123 65 45 chr20 4668629 4669181 -61998824 + L1MB1 LINE L1 5266 5828 -361 1319 97 0 43 chr20 4669183 4669369 -61998636 + AluSq SINE Alu 1 178 -135 1210 83 12 0 chr20 4669369 4669538 -61998467 + L1MB1 LINE L1 5998 6168 0 1977 152 30 0 chr20 4669753 4670050 -61997955 - AluJo SINE Alu -6 306 1 1825 228 94 4 chr20 4670075 4670562 -61997443 - MER90 LTR ERV1 0 614 84 400 249 127 71 chr20 4670608 4671073 -61996932 - L1M4 LINE L1 -1873 4273 3782 880 191 0 0 chr20 4671259 4671416 -61996589 + MER3 DNA MER1_type 1 157 -52 186 43 0 0 chr20 4671506 4671529 -61996476 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 1895 137 14 0 chr20 4671531 4671808 -61996197 - AluJb SINE Alu -31 281 1 225 331 12 41 chr20 4672081 4672253 -61995752 + L2 LINE L2 1522 1688 -1626 1306 213 281 19 chr20 4672315 4672738 -61995267 - MLT1F LTR MaLR 0 542 9 5854 127 14 29 chr20 4673208 4674347 -61993658 - L1PB3 LINE L1 0 6154 5031 813 276 91 111 chr20 4674798 4675177 -61992828 + MER77 LTR ERV1 81 488 -117 763 127 17 17 chr20 4675217 4675335 -61992670 - FRAM SINE Alu -38 138 21 586 234 30 14 chr20 4675345 4675510 -61992495 + MER77 LTR ERV1 426 598 -7 2292 98 7 10 chr20 4675900 4676206 -61991799 - AluSx SINE Alu -2 310 6 693 164 8 22 chr20 4676434 4676568 -61991437 + MSTD LTR MaLR 1 132 -264 387 0 0 0 chr20 4676578 4676621 -61991384 + (TG)n Simple_repeat Simple_repeat 2 44 0 613 86 39 0 chr20 4676621 4676749 -61991256 + (TA)n Simple_repeat Simple_repeat 1 133 0 1807 32 28 0 chr20 4676749 4676965 -61991040 - L1PA5 LINE L1 -5 6149 5928 1007 215 20 28 chr20 4676983 4677234 -61990771 + MSTD LTR MaLR 148 396 0 383 198 222 12 chr20 4678084 4678251 -61989754 + L2 LINE L2 937 1138 -2176 1289 297 11 23 chr20 4678463 4678934 -61989071 + L1MCb LINE L1 5 469 -5576 * 1865 208 123 64 chr20 4678924 4679307 -61988698 + L1MCb LINE L1 1813 2172 -4392 254 33 0 0 chr20 4679307 4679337 -61988668 + MSTC LTR MaLR 324 353 -75 1865 208 123 64 chr20 4679337 4679851 -61988154 + L1MCb LINE L1 2172 2611 -3953 3249 186 24 16 chr20 4679861 4680521 -61987484 + L1MB7 LINE L1 4781 5435 -743 1434 158 114 70 chr20 4680521 4680950 -61987055 + LTR7 LTR ERV1 1 448 -2 3249 186 24 16 chr20 4680950 4681328 -61986677 + L1MB7 LINE L1 5435 5830 -348 1872 157 7 0 chr20 4681328 4681621 -61986384 + AluJb SINE Alu 1 295 -17 3249 186 24 16 chr20 4681621 4681682 -61986323 + L1MB7 LINE L1 5830 5889 -289 4548 103 37 83 chr20 4681682 4681954 -61986051 - MER4E LTR ERV1 0 779 496 2397 137 36 5 chr20 4681954 4682340 -61985665 + MER48 LTR ERV1 1 398 0 4548 103 37 83 chr20 4682340 4682468 -61985537 - MER4E LTR ERV1 -283 496 364 2197 48 58 55 chr20 4682468 4682777 -61985228 - AluY SINE Alu -1 310 1 4548 103 37 83 chr20 4682777 4683192 -61984813 - MER4E LTR ERV1 -415 364 1 1303 201 16 33 chr20 4683192 4683495 -61984510 + L1MB7 LINE L1 5886 6183 -1 1331 92 11 0 chr20 4683521 4683705 -61984300 + MER30 DNA MER1_type 1 186 -44 608 151 0 0 chr20 4683705 4683798 -61984207 - AluJ/FLAM SINE Alu -218 94 2 23 33 0 0 chr20 4684197 4684227 -61983778 + AT_rich Low_complexity Low_complexity 1 30 0 * 230 250 148 0 chr20 4684214 4684229 -61983776 - L1MA4A LINE L1 -21 6282 6268 4657 111 9 0 chr20 4684229 4684886 -61983119 - L1PB4 LINE L1 -31 6125 5463 1405 124 0 0 chr20 4684937 4685122 -61982883 + AluSx SINE Alu 5 189 -123 674 222 146 77 chr20 4685189 4685423 -61982582 - LTR28 LTR ERV1 -237 607 343 505 242 121 18 chr20 4685518 4685683 -61982322 - LTR1 LTR ERV1 -568 217 36 256 146 91 0 chr20 4685693 4685748 -61982257 - LTR1B LTR ERV1 -724 102 43 708 144 0 0 chr20 4685764 4685868 -61982137 + AluSx SINE Alu 185 288 -22 507 305 60 73 chr20 4686279 4686468 -61981537 + HAL1 LINE L1 1113 1296 -1211 4377 108 21 57 chr20 4686468 4687184 -61980821 + LTR8 LTR ERV1 2 691 0 507 305 60 73 chr20 4687184 4687364 -61980641 + HAL1 LINE L1 1296 1477 -1030 298 231 69 39 chr20 4687373 4687503 -61980502 - L1ME4a LINE L1 -56 6065 5932 360 208 123 39 chr20 4687559 4687689 -61980316 - L1ME4a LINE L1 -11 6110 5970 2294 81 3 0 chr20 4687719 4688028 -61979977 - AluSq SINE Alu -3 310 1 606 128 118 205 chr20 4688754 4688859 -61979146 - MLT1A2 LTR MaLR -135 255 142 2120 95 7 0 chr20 4688859 4689154 -61978851 - AluSq SINE Alu -16 297 1 606 128 118 205 chr20 4689154 4689315 -61978690 - MLT1A2 LTR MaLR -248 142 3 1624 143 35 7 chr20 4689488 4689775 -61978230 - AluSx SINE Alu -17 295 1 396 71 0 0 chr20 4689802 4689858 -61978147 + (TG)n Simple_repeat Simple_repeat 2 57 0 444 280 80 19 chr20 4689917 4690225 -61977780 + L1MC/D LINE L1 5269 5597 -747 291 282 0 68 chr20 4690306 4690409 -61977596 - L3 LINE CR1 -1 1576 1481 595 187 150 27 chr20 4690576 4690739 -61977266 - MER5A DNA MER1_type 0 189 4 363 313 30 0 chr20 4691015 4691149 -61976856 + L2 LINE L2 2889 3026 -287 588 257 76 45 chr20 4691150 4691438 -61976567 - L2 LINE L2 -1050 2264 1968 1024 278 65 39 chr20 4691549 4691980 -61976025 + HAL1 LINE L1 206 647 -1860 390 241 108 59 chr20 4691998 4692201 -61975804 + HAL1 LINE L1 759 971 -1536 2724 10 0 3 chr20 4692204 4692516 -61975489 + AluY SINE Alu 1 311 0 227 277 131 15 chr20 4692594 4692724 -61975281 + MER21B LTR ERV1 708 852 -11 2024 104 21 10 chr20 4692925 4693214 -61974791 + AluSx SINE Alu 1 292 -20 683 189 8 15 chr20 4693603 4693735 -61974270 + FLAM_A SINE Alu 1 131 -2 375 154 0 0 chr20 4693857 4693922 -61974083 + CT-rich Low_complexity Low_complexity 1 65 0 1752 138 95 0 chr20 4693938 4694221 -61973784 - AluSg SINE Alu 0 310 1 1628 266 42 13 chr20 4694286 4694760 -61973245 - MER74B LTR ERVL -75 547 60 549 176 34 8 chr20 4694775 4694894 -61973111 + MER3 DNA MER1_type 70 191 -18 264 200 169 4 chr20 4696110 4696216 -61971789 + L1ME LINE L1 5530 5649 -472 254 174 58 43 chr20 4696251 4696320 -61971685 + L1ME LINE L1 5782 5851 -270 21 36 0 0 chr20 4696415 4696443 -61971562 + AT_rich Low_complexity Low_complexity 1 28 0 2703 128 57 0 chr20 4696597 4697018 -61970987 + MER65A LTR ERV1 1 445 0 1139 175 14 153 chr20 4697303 4697622 -61970383 - MLT1A1 LTR MaLR -51 314 51 2104 102 0 7 chr20 4697622 4697916 -61970089 + AluSx SINE Alu 1 292 -20 1139 175 14 153 chr20 4697916 4697961 -61970044 - MLT1A1 LTR MaLR -314 51 1 446 316 40 28 chr20 4699901 4700151 -61967854 - LTR16C LTR ERVL -158 333 81 387 302 40 50 chr20 4700269 4700460 -61967545 + L1ME4a LINE L1 4490 4680 -1466 2074 107 17 0 chr20 4700460 4700749 -61967256 + AluSx SINE Alu 1 294 -18 387 302 40 50 chr20 4700749 4700779 -61967226 + L1ME4a LINE L1 4680 4709 -1437 26 0 0 27 chr20 4701452 4701464 -61966541 + AT_rich Low_complexity Low_complexity 1 12 -24 2274 88 0 0 chr20 4701464 4701758 -61966247 - AluSx SINE Alu -18 294 1 26 0 0 27 chr20 4701758 4701782 -61966223 + AT_rich Low_complexity Low_complexity 12 36 0 192 77 0 0 chr20 4702024 4702050 -61965955 + (GA)n Simple_repeat Simple_repeat 2 27 0 937 265 109 123 chr20 4702432 4702749 -61965256 + L2 LINE L2 1704 2024 -1290 973 131 49 38 chr20 4702749 4702932 -61965073 + MER5A DNA MER1_type 4 188 -1 937 265 109 123 chr20 4702932 4703442 -61964563 + L2 LINE L2 2024 2698 -616 1671 185 0 3 chr20 4703442 4703739 -61964266 + AluJb SINE Alu 1 296 -16 937 265 109 123 chr20 4703739 4703877 -61964128 + L2 LINE L2 2698 2836 -478 1959 244 46 33 chr20 4704376 4704474 -61963531 + MLT1G LTR MaLR 1 96 -494 2262 94 0 0 chr20 4704474 4704773 -61963232 - AluSx SINE Alu -12 300 2 1959 244 46 33 chr20 4704773 4705256 -61962749 + MLT1G LTR MaLR 96 590 0 1704 136 0 68 chr20 4705969 4706292 -61961713 - AluJo SINE Alu -11 301 1 22 0 0 0 chr20 4707055 4707077 -61960928 + GC_rich Low_complexity Low_complexity 1 22 0 27 73 0 0 chr20 4707657 4707712 -61960293 + GC_rich Low_complexity Low_complexity 1 55 0 207 188 0 0 chr20 4707981 4708029 -61959976 + G-rich Low_complexity Low_complexity 4 51 0 386 305 51 44 chr20 4708822 4709011 -61958994 + L1ME4a LINE L1 5333 5522 -720 271 333 38 9 chr20 4709071 4709176 -61958829 + MIR SINE MIR 79 186 -76 347 297 67 24 chr20 4709245 4709454 -61958551 + L1ME4a LINE L1 5616 5833 -288 359 343 75 0 chr20 4710694 4710828 -61957177 - MER5B DNA MER1_type -30 148 5 257 255 69 39 chr20 4711087 4711189 -61956816 + MIR SINE MIR 45 149 -113 3390 143 27 13 chr20 4711438 4712058 -61955947 + L1 LINE L1 4021 4649 -1497 2804 157 9 0 chr20 4712059 4712519 -61955486 - L1 LINE L1 -2043 4103 3640 1237 219 4 4 chr20 4712513 4712769 -61955236 - L1 LINE L1 -3310 2836 2581 * 296 252 115 31 chr20 4712818 4713044 -61954961 - L1M4 LINE L1 -1530 4616 4372 225 289 175 5 chr20 4713382 4713576 -61954429 - L1M4 LINE L1 -2201 3945 3719 906 320 125 14 chr20 4713647 4714078 -61953927 + L2 LINE L2 2196 2674 -640 810 107 0 0 chr20 4714090 4714202 -61953803 - AluJb SINE Alu -186 126 15 490 332 46 5 chr20 4714202 4714419 -61953586 + L2 LINE L2 2692 2917 -397 282 270 22 45 chr20 4714423 4714512 -61953493 + L2 LINE L2 3186 3272 0 1333 171 77 18 chr20 4714568 4714842 -61953163 + AluJo SINE Alu 9 298 -14 874 158 0 0 chr20 4714964 4715097 -61952908 + FLAM_C SINE Alu 1 133 0 221 196 0 0 chr20 4715110 4715156 -61952849 + L2 LINE L2 3268 3313 0 405 313 64 38 chr20 4715636 4715884 -61952121 - L1M4 LINE L1 -743 5403 5136 3633 104 73 0 chr20 4715884 4716421 -61951584 - L1PA13 LINE L1 0 6163 5588 405 313 64 38 chr20 4716421 4716622 -61951383 - L1M4 LINE L1 -1010 5136 4942 478 323 75 21 chr20 4716703 4717357 -61950648 - L1M4 LINE L1 -1302 4844 4156 971 275 210 7 chr20 4717999 4718681 -61949324 - L2 LINE L2 0 3313 2476 585 196 43 43 chr20 4719174 4719337 -61948668 + L1MB8 LINE L1 6022 6184 0 24 32 0 0 chr20 4721999 4722030 -61945975 + AT_rich Low_complexity Low_complexity 1 31 0 2329 145 32 54 chr20 4722676 4722743 -61945262 - Tigger2a DNA MER2_type -2276 432 365 2138 82 7 0 chr20 4722743 4723051 -61944954 - AluSx SINE Alu 0 310 1 2329 145 32 54 chr20 4723051 4723424 -61944581 - Tigger2a DNA MER2_type -2343 365 1 2680 152 38 2 chr20 4723701 4724149 -61943856 + MER88 LTR ERVL 1 464 0 2048 105 3 10 chr20 4724259 4724565 -61943440 + AluSq SINE Alu 1 304 -9 979 180 22 11 chr20 4725332 4725515 -61942490 - MER5A DNA MER1_type -4 185 1 535 261 155 0 chr20 4725787 4725948 -61942057 - MER5A DNA MER1_type 0 189 4 858 182 0 0 chr20 4726334 4726466 -61941539 - FLAM_A SINE Alu -1 132 1 650 290 36 23 chr20 4726878 4727176 -61940829 + MER115 DNA AcHobo 134 455 -238 696 198 0 0 chr20 4727706 4727832 -61940173 + FRAM SINE Alu 33 158 -18 2060 100 0 0 chr20 4727837 4728148 -61939857 + AluSg SINE Alu 1 311 0 435 258 49 63 chr20 4728220 4728363 -61939642 + L1ME4a LINE L1 5795 5934 -187 2466 31 0 0 chr20 4728363 4728651 -61939354 + AluY SINE Alu 3 290 -21 435 258 49 63 chr20 4728651 4728794 -61939211 + L1ME4a LINE L1 5934 6077 -44 1683 200 141 50 chr20 4728804 4729265 -61938740 + MLT2B1 LTR ERVL 18 520 0 201 348 29 0 chr20 4729406 4729475 -61938530 - MIR SINE MIR -18 244 174 249 183 56 56 chr20 4729624 4729695 -61938310 - MER91C DNA MER1_type -48 92 22 297 0 0 0 chr20 4729932 4729965 -61938040 + (A)n Simple_repeat Simple_repeat 1 33 0 2148 155 45 18 chr20 4730104 4730484 -61937521 - MLT1B LTR MaLR 0 390 1 1749 164 13 7 chr20 4731684 4731988 -61936017 - AluJb SINE Alu -6 306 1 1736 218 11 5 chr20 4732301 4732681 -61935324 + L1MB7 LINE L1 5798 6179 -5 2124 116 3 0 chr20 4732691 4733002 -61935003 - AluSx SINE Alu 0 312 1 3155 71 7 0 chr20 4733641 4734052 -61933953 - L1PA8 LINE L1 0 6172 5759 2239 97 0 0 chr20 4735137 4735437 -61932568 + AluSx SINE Alu 1 300 -12 696 208 125 17 chr20 4735457 4735697 -61932308 - Charlie4a DNA MER1_type -37 471 206 516 209 27 0 chr20 4735697 4735807 -61932198 - MER81 DNA DNA 0 114 2 347 137 0 0 chr20 4735809 4735860 -61932145 - MER81 DNA DNA -63 51 1 972 202 9 37 chr20 4735861 4736079 -61931926 - Charlie4a DNA MER1_type -296 212 1 1417 258 129 48 chr20 4736273 4736589 -61931416 + L1ME3A LINE L1 5509 5798 -372 1575 184 7 3 chr20 4736589 4736883 -61931122 + AluJo SINE Alu 1 295 -17 1417 258 129 48 chr20 4736883 4737170 -61930835 + L1ME3A LINE L1 5798 6161 -9 202 197 121 15 chr20 4737774 4737840 -61930165 - MIR3 SINE MIR -133 75 3 249 273 52 13 chr20 4738771 4738848 -61929157 - L2 LINE L2 -35 3237 3158 1859 209 88 33 chr20 4739021 4739499 -61928506 + L1ME3A LINE L1 5595 6108 -62 2140 102 0 0 chr20 4739499 4739794 -61928211 + AluY SINE Alu 1 295 -16 1859 209 88 33 chr20 4739794 4739861 -61928144 + L1ME3A LINE L1 6108 6170 0 2205 165 6 3 chr20 4739876 4740240 -61927765 - MLT1A1 LTR MaLR 0 365 1 232 211 233 11 chr20 4741193 4741283 -61926722 + MIR3 SINE MIR 78 187 -21 25 0 0 0 chr20 4742172 4742197 -61925808 + GC_rich Low_complexity Low_complexity 1 25 0 617 284 62 0 chr20 4743960 4744136 -61923869 + MIR SINE MIR 62 248 -14 1730 121 72 8 chr20 4744417 4744682 -61923323 + AluJo SINE Alu 6 287 -25 423 38 0 0 chr20 4744684 4744737 -61923268 + (TG)n Simple_repeat Simple_repeat 2 54 0 361 260 0 62 chr20 4744737 4744833 -61923172 + L1MC4 LINE L1 6614 6703 -1339 207 0 0 0 chr20 4744851 4744874 -61923131 + (CA)n Simple_repeat Simple_repeat 2 24 0 280 195 110 37 chr20 4746006 4746088 -61921917 + L2 LINE L2 3175 3262 -10 694 214 132 6 chr20 4746099 4746281 -61921724 - MIR SINE MIR -37 225 21 1897 128 3 0 chr20 4746597 4746879 -61921126 - AluSq SINE Alu -4 309 27 2040 121 0 7 chr20 4748528 4748833 -61919172 - AluSx SINE Alu -9 303 1 497 317 66 49 chr20 4748984 4749350 -61918655 - L1MC4a LINE L1 -1903 5905 5534 2096 101 7 3 chr20 4751044 4751350 -61916655 - AluSp SINE Alu 0 313 7 217 348 43 0 chr20 4752552 4752644 -61915361 - L2 LINE L2 -5 3267 3172 561 217 77 14 chr20 4752734 4752877 -61915128 + MER63A DNA MER1_type 53 204 -6 265 359 220 13 chr20 4753133 4753515 -61914490 - L2 LINE L2 -2 3270 2810 454 208 31 0 chr20 4753609 4753705 -61914300 - MER5A DNA MER1_type -80 109 11 215 325 8 32 chr20 4753727 4753850 -61914155 - L2 LINE L2 -559 2755 2636 1780 150 11 0 chr20 4753882 4754169 -61913836 + AluJb SINE Alu 6 295 -17 997 212 33 0 chr20 4754846 4755058 -61912947 + MER20 DNA MER1_type 1 219 0 21 0 0 0 chr20 4755405 4755426 -61912579 + AT_rich Low_complexity Low_complexity 1 21 0 2129 106 3 6 chr20 4755749 4756060 -61911945 - AluSx SINE Alu -2 310 1 1800 150 7 7 chr20 4756060 4756353 -61911652 - AluJb SINE Alu -19 293 1 1685 189 0 0 chr20 4757044 4757335 -61910670 + AluJo SINE Alu 7 297 -15 1146 133 6 17 chr20 4758277 4758458 -61909547 + AluJo SINE Alu 91 269 -43 1883 119 3 11 chr20 4758494 4758834 -61909171 + AluSx SINE Alu 1 338 0 1395 272 28 6 chr20 4758936 4759296 -61908709 - LTR16C LTR ERVL 0 491 124 2186 97 7 0 chr20 4760326 4760626 -61907379 - AluSc SINE Alu -7 302 1 268 330 191 0 chr20 4761165 4761338 -61906667 + L2 LINE L2 2965 3170 -102 1528 132 0 0 chr20 4762157 4762385 -61905620 - AluSg/x SINE Alu -1 309 82 1106 168 0 0 chr20 4762418 4762585 -61905420 - FAM SINE Alu -8 167 1 2220 161 43 21 chr20 4763222 4763645 -61904360 + MSTB1 LTR MaLR 1 432 0 6763 170 19 11 chr20 4763693 4765033 -61902972 + L1MC3 LINE L1 6335 7784 -1 1553 180 45 7 chr20 4765042 4765331 -61902674 + AluJb SINE Alu 1 300 -12 777 172 9 4 chr20 4765333 4765490 -61902515 + L1MB4 LINE L1 5867 6021 -159 286 179 0 0 chr20 4765490 4765546 -61902459 + Alu SINE Alu 242 297 -5 472 260 86 36 chr20 4765549 4765888 -61902117 + L1MB7 LINE L1 5194 5543 -619 2411 261 75 22 chr20 4766001 4766734 -61901271 + L1ME3 LINE L1 5361 6132 -30 1883 170 55 18 chr20 4766875 4767258 -61900747 + L1MB7 LINE L1 5754 6151 -33 522 0 0 0 chr20 4767259 4767317 -61900688 + (TTTTA)n Simple_repeat Simple_repeat 4 61 0 720 273 61 4 chr20 4767792 4768070 -61899935 + L1ME3 LINE L1 5627 5920 -242 1624 238 72 12 chr20 4768075 4768504 -61899501 + MLT1C LTR MaLR 9 463 -4 661 306 51 0 chr20 4768505 4768740 -61899265 + L1ME3 LINE L1 5914 6160 -2 788 170 0 15 chr20 4768803 4768938 -61899067 - FLAM_C SINE Alu 0 133 1 318 221 126 11 chr20 4769060 4769155 -61898850 - LTR16C LTR ERVL -6 485 380 250 282 51 8 chr20 4769185 4769302 -61898703 - LTR16C LTR ERVL -188 303 182 537 220 74 60 chr20 4770387 4770574 -61897431 + MIR SINE MIR 59 259 -3 589 304 163 19 chr20 4770791 4771238 -61896767 + L2 LINE L2 2590 3104 -209 670 218 78 63 chr20 4771258 4771644 -61896361 - MLT1H LTR MaLR 0 549 95 290 221 305 0 chr20 4771742 4771837 -61896168 + L2 LINE L2 3171 3294 -19 818 232 0 0 chr20 4771849 4772013 -61895992 - FRAM SINE Alu -6 170 7 27 0 0 0 chr20 4772130 4772157 -61895848 + AT_rich Low_complexity Low_complexity 1 27 0 1937 118 4 0 chr20 4772157 4772428 -61895577 - AluSq SINE Alu -39 274 3 197 333 0 0 chr20 4772853 4772919 -61895086 + MIR SINE MIR 58 123 -85 282 185 163 33 chr20 4773014 4773106 -61894899 - Charlie7 DNA MER1_type 0 2612 2509 225 0 0 0 chr20 4773177 4773202 -61894803 + (T)n Simple_repeat Simple_repeat 1 25 0 531 174 0 11 chr20 4773347 4773439 -61894566 + AluJ/FLAM SINE Alu 4 94 -218 620 169 8 23 chr20 4773445 4773575 -61894430 + FRAM SINE Alu 43 170 -6 15065 196 65 10 chr20 4773621 4773656 -61894349 - L1PB1 LINE L1 -21 6846 6814 2266 89 3 0 chr20 4773656 4773960 -61894045 - AluSg SINE Alu -5 305 1 15065 196 65 10 chr20 4773960 4775870 -61892135 - L1PB1 LINE L1 -53 6814 5010 668 12 0 12 chr20 4775870 4775952 -61892053 + (TTTC)n Simple_repeat Simple_repeat 1 81 0 2035 112 0 3 chr20 4775955 4776240 -61891765 - AluSq SINE Alu -29 284 1 15065 196 65 10 chr20 4776240 4778167 -61889838 - L1PB1 LINE L1 -1858 5009 3189 2122 116 0 31 chr20 4778167 4778487 -61889518 - AluSx SINE Alu -2 310 1 15065 196 65 10 chr20 4778487 4781060 -61886945 - L1PB1 LINE L1 -3678 3189 6 439 243 130 35 chr20 4781066 4781235 -61886770 - MIR SINE MIR -46 216 32 216 324 193 7 chr20 4782179 4782324 -61885681 - L2 LINE L2 -49 3264 3093 3919 177 29 4 chr20 4782334 4783035 -61884970 + MER44D DNA MER2_type 13 602 -3 431 234 14 0 chr20 4783042 4783146 -61884859 + L1ME2 LINE L1 6053 6163 -3 251 287 92 88 chr20 4783188 4783439 -61884566 - L2 LINE L2 -246 3067 2816 1755 162 14 0 chr20 4783584 4783913 -61884092 + AluJb SINE Alu 1 333 0 826 160 0 0 chr20 4784002 4784133 -61883872 - FLAM_A SINE Alu -2 131 1 776 175 29 6 chr20 4785246 4785403 -61882602 + MLT1D LTR MaLR 1 144 -361 1658 240 36 44 chr20 4785545 4785947 -61882058 + LTR16C LTR ERVL 45 444 -47 2205 107 0 0 chr20 4785947 4786257 -61881748 - AluSg SINE Alu 0 310 1 1658 240 36 44 chr20 4786257 4786304 -61881701 + LTR16C LTR ERVL 444 490 -1 2328 110 0 0 chr20 4786932 4787232 -61880773 - AluSx SINE Alu -12 300 1 535 270 47 18 chr20 4787679 4787957 -61880048 + HAL1 LINE L1 1894 2179 -328 338 286 153 20 chr20 4787999 4788195 -61879810 + HAL1 LINE L1 2281 2502 -5 2350 111 0 3 chr20 4788398 4788704 -61879301 + AluSq SINE Alu 1 305 -8 2594 64 0 0 chr20 4789557 4789853 -61878152 - AluY SINE Alu -15 296 1 418 263 11 0 chr20 4790892 4790987 -61877018 + MER5A DNA MER1_type 10 105 -84 1767 159 98 94 chr20 4791628 4792290 -61875715 - MER4A LTR ERV1 0 872 1 705 271 135 10 chr20 4792330 4792633 -61875372 - L2 LINE L2 -98 3215 2875 3468 128 0 4 chr20 4792669 4793168 -61874837 + LOR1a LTR ERV1 1 497 0 2163 112 53 36 chr20 4793811 4794169 -61873836 - THE1B LTR MaLR 0 364 1 473 248 0 9 chr20 4794190 4794299 -61873706 + MER5B DNA MER1_type 48 155 -23 795 151 22 22 chr20 4794330 4794469 -61873536 + MER5A DNA MER1_type 28 166 -23 193 0 61 30 chr20 4795424 4795457 -61872548 + (TTTTG)n Simple_repeat Simple_repeat 5 38 0 2161 98 4 0 chr20 4795691 4795966 -61872039 - AluSx SINE Alu -36 276 1 439 305 159 21 chr20 4796070 4796309 -61871696 - L1M4 LINE L1 -1526 4620 4349 4359 131 43 49 chr20 4796465 4797254 -61870751 - LTR1 LTR ERV1 -1 784 1 1049 149 40 0 chr20 4797655 4797807 -61870198 - L1 LINE L1 -852 5294 5131 1713 197 13 13 chr20 4797807 4798117 -61869888 - AluJb SINE Alu -2 310 1 1049 149 40 0 chr20 4798117 4798165 -61869840 - L1 LINE L1 -1015 5131 5086 890 166 41 131 chr20 4798165 4798332 -61869673 + L1MA9 LINE L1 6021 6147 -165 303 28 0 0 chr20 4798332 4798368 -61869637 + (CA)n Simple_repeat Simple_repeat 1 36 0 890 166 41 131 chr20 4798368 4798520 -61869485 + L1MA9 LINE L1 6147 6311 -1 26 0 0 0 chr20 4798527 4798553 -61869452 + AT_rich Low_complexity Low_complexity 1 26 0 520 205 49 0 chr20 4798817 4798939 -61869066 + MER94 DNA DNA 1 128 -6 207 204 0 0 chr20 4799660 4799709 -61868296 + CT-rich Low_complexity Low_complexity 1 49 0 1423 169 37 36 chr20 4799882 4799908 -61868097 - MLT2D LTR ERVL 0 414 390 402 21 0 0 chr20 4799908 4799955 -61868050 + (TG)n Simple_repeat Simple_repeat 2 48 0 1423 169 37 36 chr20 4799955 4800277 -61867728 - MLT2D LTR ERVL -24 390 1 296 272 52 44 chr20 4800400 4800536 -61867469 - MIR3 SINE MIR -65 143 7 2266 107 0 13 chr20 4801430 4801740 -61866265 + AluSg SINE Alu 1 306 -4 240 86 0 0 chr20 4805338 4805373 -61862632 + (A)n Simple_repeat Simple_repeat 1 35 0 205 232 11 105 chr20 4805380 4805475 -61862530 - MIR SINE MIR 0 262 177 397 188 0 38 chr20 4805476 4805556 -61862449 + MER116 DNA Mariner 2 78 -2 1901 121 0 93 chr20 4805773 4806120 -61861885 + AluSx SINE Alu 1 318 0 619 228 91 10 chr20 4806440 4806637 -61861368 + LTR33 LTR ERVL 308 520 -1 1917 104 93 11 chr20 4807548 4807827 -61860178 + AluSx SINE Alu 2 303 -9 383 286 29 100 chr20 4807892 4808241 -61859764 + MLT1I LTR MaLR 71 394 -15 2233 130 14 9 chr20 4809199 4809544 -61858461 - MER7A DNA MER2_type 0 346 2 671 281 130 4 chr20 4809551 4809782 -61858223 - MIR SINE MIR -1 261 2 791 199 37 0 chr20 4810028 4810189 -61857816 - MER5A DNA MER1_type -3 186 20 22 35 0 0 chr20 4811456 4811485 -61856520 + AT_rich Low_complexity Low_complexity 1 29 0 972 222 94 0 chr20 4811538 4811741 -61856264 + MIR SINE MIR 17 238 -24 722 129 11 0 chr20 4811772 4811901 -61856104 + L1MB3 LINE L1 5825 5957 -211 1385 140 4 25 chr20 4811949 4812192 -61855813 + L1MB3 LINE L1 5944 6181 -2 723 283 88 23 chr20 4812366 4812709 -61855296 + L1MC4a LINE L1 5578 5942 -1866 1609 160 42 11 chr20 4812716 4812979 -61855026 + AluSx SINE Alu 3 273 -39 402 74 0 0 chr20 4812980 4813034 -61854971 + (GGGGA)n Simple_repeat Simple_repeat 1 54 0 941 148 7 0 chr20 4814383 4814525 -61853480 - FLAM_C SINE Alu 0 143 1 270 218 39 13 chr20 4814824 4814889 -61853116 + (TATAG)n Simple_repeat Simple_repeat 5 74 -10 1725 151 0 96 chr20 4814889 4815042 -61852963 + AluJo SINE Alu 2 107 -195 1764 119 12 4 chr20 4815042 4815295 -61852710 + AluSq SINE Alu 11 265 -48 1725 151 0 96 chr20 4815295 4815473 -61852532 + AluJo SINE Alu 107 301 -1 270 218 39 13 chr20 4815473 4815485 -61852520 + (TATAG)n Simple_repeat Simple_repeat 74 84 0 2072 124 0 3 chr20 4819288 4819602 -61848403 + AluSx SINE Alu 1 313 0 439 225 137 85 chr20 4819608 4819901 -61848104 + L1ME3A LINE L1 5742 6049 -121 2216 130 0 0 chr20 4820575 4820882 -61847123 + AluSx SINE Alu 1 307 -5 1361 174 170 0 chr20 4821092 4821403 -61846602 - MLT1A1 LTR MaLR 0 365 2 341 202 45 11 chr20 4822355 4822444 -61845561 - L1MC4 LINE L1 -1337 6705 6614 781 146 47 113 chr20 4822446 4822476 -61845529 - MER20 DNA MER1_type 0 219 189 2169 109 0 3 chr20 4822476 4822784 -61845221 - AluSq SINE Alu 0 308 2 781 146 47 113 chr20 4822784 4822811 -61845194 - MER20 DNA MER1_type -30 189 162 908 176 0 24 chr20 4822811 4822981 -61845024 - FRAM SINE Alu 0 166 1 781 146 47 113 chr20 4822981 4823133 -61844872 - MER20 DNA MER1_type -57 162 22 2381 131 53 51 chr20 4823134 4823601 -61844404 + L1MB3 LINE L1 5708 6175 -8 313 232 0 0 chr20 4823601 4823657 -61844348 + L1MC4 LINE L1 6648 6703 -1339 1975 155 0 7 chr20 4823660 4823956 -61844049 - AluJb SINE Alu -18 294 1 1031 181 13 44 chr20 4824036 4824217 -61843788 + MLT1D LTR MaLR 267 452 -53 1792 190 0 10 chr20 4824217 4824522 -61843483 + AluJo SINE Alu 1 302 -10 1888 147 9 34 chr20 4824522 4824842 -61843163 + AluJb SINE Alu 1 312 0 1031 181 13 44 chr20 4824842 4824885 -61843120 + MLT1D LTR MaLR 450 485 -20 28 0 0 0 chr20 4824971 4824999 -61843006 + AT_rich Low_complexity Low_complexity 1 28 0 2128 94 56 3 chr20 4825095 4825383 -61842622 - AluSx SINE Alu -9 303 1 343 316 165 14 chr20 4825468 4825753 -61842252 - L2 LINE L2 0 3272 2945 1748 213 48 21 chr20 4825850 4826334 -61841671 + MLT1D LTR MaLR 1 497 -8 194 275 73 73 chr20 4826349 4826458 -61841547 - L2 LINE L2 -583 2731 2623 181 340 107 14 chr20 4826857 4827072 -61840933 - L2 LINE L2 -1241 2073 1839 1712 157 27 27 chr20 4827197 4827490 -61840515 - AluJo SINE Alu -19 293 1 423 263 52 66 chr20 4828020 4828309 -61839696 + L1 LINE L1 5118 5402 -744 190 273 30 30 chr20 4828395 4828494 -61839511 + L2 LINE L2 2168 2266 -1048 1981 153 7 0 chr20 4829232 4829520 -61838485 - AluJo SINE Alu -12 300 11 1043 199 178 23 chr20 4830408 4830801 -61837204 - LTR16A1 LTR ERVL -3 454 1 1418 188 59 26 chr20 4831828 4832100 -61835905 + AluJo SINE Alu 6 286 -26 180 0 0 0 chr20 4832100 4832120 -61835885 + (CAAAT)n Simple_repeat Simple_repeat 2 21 0 520 258 17 0 chr20 4832120 4832240 -61835765 + MER5B DNA MER1_type 57 178 0 622 241 21 7 chr20 4833018 4833163 -61834842 - MIR SINE MIR -69 193 47 817 185 12 19 chr20 4833271 4833433 -61834572 - MER5A DNA MER1_type -1 188 28 327 266 142 0 chr20 4833441 4833554 -61834451 - MIR SINE MIR -54 208 80 235 225 27 0 chr20 4834469 4834626 -61833379 + (TG)n Simple_repeat Simple_repeat 1 190 0 22 56 0 0 chr20 4836729 4836765 -61831240 + AT_rich Low_complexity Low_complexity 1 36 0 1846 154 3 17 chr20 4836777 4837069 -61830936 + AluJo SINE Alu 13 300 -12 1713 163 3 21 chr20 4837065 4837390 -61830615 + L1MB4 LINE L1 5860 6178 -2 509 290 104 55 chr20 4837409 4837577 -61830428 - L1ME4a LINE L1 -61 6060 5902 2269 82 0 4 chr20 4837577 4837856 -61830149 + AluSq SINE Alu 11 288 -25 509 290 104 55 chr20 4837856 4838108 -61829897 - L1ME4a LINE L1 -219 5902 5619 230 118 0 0 chr20 4838231 4838265 -61829740 - MER63 DNA MER1_type -896 34 1 244 279 88 0 chr20 4838632 4838700 -61829305 - MIR3 SINE MIR -23 185 112 2330 113 0 0 chr20 4838730 4839023 -61828982 + AluSx SINE Alu 1 293 -19 756 217 38 71 chr20 4839217 4839429 -61828576 - MER63A DNA MER1_type -5 205 1 432 192 131 39 chr20 4839591 4839696 -61828309 - MIR SINE MIR -24 238 117 2484 96 0 0 chr20 4839696 4840008 -61827997 - AluSq SINE Alu -1 312 1 432 192 131 39 chr20 4840008 4840032 -61827973 - MIR SINE MIR -145 117 97 312 194 12 2 chr20 4840051 4840120 -61827885 - LTR16C LTR ERVL 0 491 385 670 248 14 0 chr20 4840177 4840322 -61827683 - LTR16C LTR ERVL -150 341 195 1900 153 6 31 chr20 4840968 4841288 -61826717 + AluJo SINE Alu 1 312 0 21 71 0 0 chr20 4843823 4843865 -61824140 + GC_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr20 4844032 4844056 -61823949 + GC_rich Low_complexity Low_complexity 1 24 0 307 344 0 39 chr20 4844246 4844426 -61823579 + C-rich Low_complexity Low_complexity 4 176 0 2118 140 3 13 chr20 4845829 4846144 -61821861 - AluJo SINE Alu 0 312 1 2129 122 14 3 chr20 4846394 4846690 -61821315 - AluSq SINE Alu -14 299 1 1068 91 0 0 chr20 4846812 4846944 -61821061 + AluSq/x SINE Alu 1 132 -181 1879 167 15 13 chr20 4846944 4847339 -61820666 - Charlie5 DNA MER1_type -3 2609 2214 417 142 82 97 chr20 4847325 4847373 -61820632 - MER3 DNA MER1_type -40 122 122 * 2660 49 0 0 chr20 4847373 4847677 -61820328 + AluY SINE Alu 1 304 -7 417 142 82 97 chr20 4847677 4847762 -61820243 - MER3 DNA MER1_type -39 123 38 2250 98 14 0 chr20 4848118 4848440 -61819565 + AluSq SINE Alu 1 313 0 712 296 98 15 chr20 4848665 4848939 -61819066 - LTR16C LTR ERVL 0 491 195 2311 89 16 22 chr20 4849016 4849329 -61818676 + AluSx SINE Alu 1 311 -1 1941 225 61 23 chr20 4850418 4850939 -61817066 + MLT1H LTR MaLR 7 547 -2 252 86 0 0 chr20 4851501 4851536 -61816469 + (GAAAA)n Simple_repeat Simple_repeat 2 36 0 328 208 1 37 chr20 4851848 4851933 -61816072 + L1MC4 LINE L1 1973 6987 -1335 1883 149 30 7 chr20 4852186 4852487 -61815518 + AluJb SINE Alu 1 308 -4 305 302 92 62 chr20 4852489 4852847 -61815158 + HAL1 LINE L1 895 1263 -1244 316 261 43 87 chr20 4852953 4853068 -61814937 + L2 LINE L2 3195 3304 -9 233 65 0 0 chr20 4853178 4853209 -61814796 - L1P4 LINE L1 -436 5732 5702 845 160 0 0 chr20 4853210 4853335 -61814670 + FLAM_C SINE Alu 1 125 -18 2310 92 112 9 chr20 4853361 4853708 -61814297 + L1PA15 LINE L1 5777 6159 -6 304 287 16 16 chr20 4853936 4854065 -61813940 + HAL1b LINE L1 670 798 -550 1355 197 0 28 chr20 4854619 4854873 -61813132 + AluJo SINE Alu 44 290 -22 288 0 0 0 chr20 4855594 4855626 -61812379 + (TA)n Simple_repeat Simple_repeat 2 33 0 2476 84 0 0 chr20 4855634 4855944 -61812061 - AluSg SINE Alu 0 310 1 21 0 0 0 chr20 4855944 4855965 -61812040 + AT_rich Low_complexity Low_complexity 1 21 0 302 288 76 0 chr20 4856114 4856232 -61811773 - L2 LINE L2 -338 2975 2849 199 333 90 9 chr20 4856971 4857082 -61810923 - L2 LINE L2 -446 2868 2749 349 240 20 10 chr20 4857085 4857185 -61810820 - MLT2E LTR ERVL -50 578 478 668 282 172 19 chr20 4857203 4857399 -61810606 - MLT2F LTR ERVL -107 556 391 1827 144 13 33 chr20 4857399 4857705 -61810300 + AluJo SINE Alu 1 300 -12 668 282 172 19 chr20 4857705 4857990 -61810015 - MLT2F LTR ERVL -272 391 1 303 412 16 10 chr20 4858281 4858475 -61809530 - L2 LINE L2 -552 2762 2568 447 271 124 39 chr20 4858568 4858826 -61809179 - MLT1H LTR MaLR -241 308 29 247 350 26 0 chr20 4858847 4858964 -61809041 - L2 LINE L2 -730 2584 2465 596 250 206 11 chr20 4859496 4859772 -61808233 - LTR16C LTR ERVL -13 478 149 2028 181 160 12 chr20 4860898 4861385 -61806620 - MLT1F1 LTR MaLR -8 559 1 400 259 52 0 chr20 4861413 4861548 -61806457 - LTR16C LTR ERVL -155 336 195 4184 162 69 59 chr20 4862160 4862318 -61805687 - L1MB3 LINE L1 -7 6176 6021 2202 101 3 7 chr20 4862318 4862637 -61805368 + AluSg SINE Alu 1 310 0 4184 162 69 59 chr20 4862637 4863055 -61804950 - L1MB3 LINE L1 -162 6021 5609 2019 84 12 0 chr20 4863055 4863304 -61804701 - AluSg SINE Alu -21 289 38 4184 162 69 59 chr20 4863304 4864011 -61803994 - L1MB3 LINE L1 -574 5609 4853 2273 110 3 3 chr20 4864011 4864310 -61803695 + AluSx SINE Alu 1 299 -13 4184 162 69 59 chr20 4864310 4864421 -61803584 - L1MB3 LINE L1 -1330 4853 4745 252 333 0 0 chr20 4864431 4864527 -61803478 - L1MC4 LINE L1 -156 7886 7791 2030 135 44 3 chr20 4864590 4864886 -61803119 - AluSx SINE Alu -4 308 1 27 0 0 0 chr20 4865048 4865075 -61802930 + AT_rich Low_complexity Low_complexity 1 27 0 1786 168 3 20 chr20 4865222 4865514 -61802491 + AluJb SINE Alu 1 287 -25 486 33 0 0 chr20 4865514 4865574 -61802431 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 363 96 0 0 chr20 4865574 4865626 -61802379 + (GGGGA)n Simple_repeat Simple_repeat 3 54 0 1478 147 5 0 chr20 4865879 4866090 -61801915 + AluJb SINE Alu 8 219 -93 308 182 121 30 chr20 4866328 4866394 -61801611 - L1M4 LINE L1 -860 5286 5215 532 274 88 86 chr20 4866492 4866550 -61801455 + L1MC4a LINE L1 5256 5312 -2496 803 63 9 18 chr20 4866550 4866661 -61801344 + L1PA11 LINE L1 6064 6173 -1 532 274 88 86 chr20 4866661 4866972 -61801033 + L1MC4a LINE L1 5312 5629 -2179 2517 90 0 0 chr20 4866972 4867282 -61800723 + AluSx SINE Alu 1 310 -2 532 274 88 86 chr20 4867282 4867560 -61800445 + L1MC4a LINE L1 5629 5905 -1903 1301 120 12 100 chr20 4868457 4868716 -61799289 - MER46A DNA MER2_type 0 236 1 963 124 164 45 chr20 4868728 4868894 -61799111 - Tigger3(Golem) DNA MER2_type 0 3028 2833 2181 101 8 62 chr20 4868894 4869250 -61798755 + MER1B DNA MER1_type 1 337 0 963 124 164 45 chr20 4869250 4869284 -61798721 - Tigger3(Golem) DNA MER2_type -195 2833 2804 1181 175 0 0 chr20 4869284 4869473 -61798532 - AluJb SINE Alu -11 301 113 445 200 252 26 chr20 4869474 4869557 -61798448 - MER5C DNA MER1_type -32 292 229 1754 159 9 62 chr20 4869557 4869878 -61798127 + AluJb SINE Alu 5 308 -4 445 200 252 26 chr20 4869878 4870024 -61797981 - MER5C DNA MER1_type -95 229 11 311 239 101 55 chr20 4870421 4870530 -61797475 - HAL1 LINE L1 -991 1516 1403 2429 42 0 3 chr20 4870805 4871109 -61796896 - AluY SINE Alu 0 303 1 1346 98 112 0 chr20 4871395 4871501 -61796504 + MER30 DNA MER1_type 3 96 -134 2255 124 3 0 chr20 4871501 4871808 -61796197 + AluSq SINE Alu 1 308 -5 1346 98 112 0 chr20 4871808 4871906 -61796099 + MER30 DNA MER1_type 96 230 0 963 150 105 163 chr20 4872394 4872658 -61795347 - MER2 DNA MER2_type -3 341 102 1595 172 17 43 chr20 4872658 4872960 -61795045 - AluJo SINE Alu -18 294 1 963 150 105 163 chr20 4872960 4873056 -61794949 - MER2 DNA MER2_type -242 102 2 234 0 0 0 chr20 4875136 4875162 -61792843 + (TG)n Simple_repeat Simple_repeat 2 27 0 510 17 0 0 chr20 4878023 4878082 -61789923 + (CA)n Simple_repeat Simple_repeat 2 60 0 2133 134 0 0 chr20 4878394 4878726 -61789279 + AluSx SINE Alu 1 332 0 22 0 0 0 chr20 4879988 4880010 -61787995 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr20 4880438 4880466 -61787539 + AT_rich Low_complexity Low_complexity 1 28 0 1108 174 10 0 chr20 4880710 4880906 -61787099 + L1MB5 LINE L1 5482 5679 -495 1301 249 119 0 chr20 4880918 4881288 -61786717 - MER82 DNA MER2_type -12 641 228 363 233 78 0 chr20 4881284 4881374 -61786631 - MER82 DNA MER2_type -556 97 1 * 2359 142 59 29 chr20 4881382 4881504 -61786501 + L1MB5 LINE L1 5705 5822 -352 2282 99 0 14 chr20 4881504 4881797 -61786208 + AluSx SINE Alu 1 289 -23 2359 142 59 29 chr20 4881797 4882118 -61785887 + L1MB5 LINE L1 5822 6161 -13 282 295 150 20 chr20 4884106 4884306 -61783699 + MIR SINE MIR 13 238 -24 438 260 0 0 chr20 4884949 4885053 -61782952 - MER3 DNA MER1_type -83 126 70 262 183 56 14 chr20 4885545 4885616 -61782389 - L2 LINE L2 -335 2978 2905 345 182 26 39 chr20 4886145 4886222 -61781783 - L2 LINE L2 0 3313 3238 1273 135 61 156 chr20 4886417 4886574 -61781431 + MER2 DNA MER2_type 1 171 -173 2236 122 0 0 chr20 4886574 4886878 -61781127 - AluSx SINE Alu -8 304 1 1273 135 61 156 chr20 4886878 4887099 -61780906 + MER2 DNA MER2_type 171 343 -1 645 264 245 23 chr20 4887696 4888299 -61779706 + L2 LINE L2 2596 3313 0 207 0 0 0 chr20 4888371 4888394 -61779611 + (A)n Simple_repeat Simple_repeat 1 23 0 419 244 128 55 chr20 4888707 4888818 -61779187 + MER5A DNA MER1_type 12 140 -49 2108 90 30 3 chr20 4888818 4889119 -61778886 - AluSx SINE Alu 0 312 1 419 244 128 55 chr20 4889119 4889171 -61778834 + MER5A DNA MER1_type 140 187 -2 946 207 0 22 chr20 4889898 4890077 -61777928 + FAM SINE Alu 1 175 0 183 42 0 0 chr20 4890209 4890233 -61777772 + (TC)n Simple_repeat Simple_repeat 2 25 0 180 0 0 0 chr20 4890286 4890306 -61777699 + (CA)n Simple_repeat Simple_repeat 2 21 0 2363 85 0 0 chr20 4891042 4891349 -61776656 + AluSg SINE Alu 1 307 -3 299 143 0 0 chr20 4892853 4892895 -61775110 - MER20 DNA MER1_type 0 219 178 2026 93 10 3 chr20 4893510 4893800 -61774205 - AluSx SINE Alu -20 292 1 348 318 98 28 chr20 4895753 4896008 -61771997 + L1ME4a LINE L1 5847 6119 -2 267 301 237 3 chr20 4896049 4896264 -61771741 - MIR SINE MIR 0 262 5 233 175 48 79 chr20 4897410 4897536 -61770469 - L1ME4a LINE L1 -18 6103 5982 1291 20 0 0 chr20 4897765 4897937 -61770068 + L1PA5 LINE L1 6000 6171 0 327 269 103 77 chr20 4898031 4898265 -61769740 + L1MC4a LINE L1 5690 5929 -1879 248 154 0 39 chr20 4898486 4898538 -61769467 + L1MC5 LINE L1 7864 7913 -48 1881 145 3 0 chr20 4898941 4899224 -61768781 - AluSx SINE Alu -21 291 8 482 288 183 38 chr20 4899233 4899632 -61768373 - L1M4 LINE L1 -954 5192 4736 328 304 6 88 chr20 4899663 4899834 -61768171 - L1M4 LINE L1 -1959 4187 4031 2225 91 3 7 chr20 4899870 4900179 -61767826 + AluSq SINE Alu 1 308 -5 839 152 0 33 chr20 4900300 4900451 -61767554 + FRAM SINE Alu 21 166 -10 281 252 59 42 chr20 4901117 4901236 -61766769 - L2 LINE L2 -1 3271 3151 473 280 122 19 chr20 4901236 4901604 -61766401 + HAL1 LINE L1 1048 1453 -1054 419 303 168 32 chr20 4901617 4902172 -61765833 - L2 LINE L2 -598 2716 2087 2194 96 7 0 chr20 4902840 4903133 -61764872 + AluSx SINE Alu 1 295 -17 306 193 18 0 chr20 4903142 4903199 -61764806 + U13 snRNA snRNA 19 76 -28 420 301 133 10 chr20 4903347 4903543 -61764462 + MIR SINE MIR 43 262 0 780 245 65 0 chr20 4908918 4909118 -61758887 + MER58A DNA MER1_type 1 213 -11 258 339 9 9 chr20 4909395 4909504 -61758501 + L2 LINE L2 2950 3058 -214 234 282 76 46 chr20 4909586 4909717 -61758288 - MER5A DNA MER1_type -22 167 33 2027 115 3 3 chr20 4911116 4911412 -61756593 + AluSx SINE Alu 1 296 -16 207 0 0 0 chr20 4911471 4911494 -61756511 + (TCCA)n Simple_repeat Simple_repeat 3 25 0 346 291 42 4 chr20 4911526 4911653 -61756352 + L1ME1 LINE L1 6046 6332 -2 234 286 155 43 chr20 4912471 4912505 -61755500 - MIR SINE MIR -60 202 173 1803 143 0 14 chr20 4912505 4912799 -61755206 - AluJo SINE Alu -22 290 1 234 286 155 43 chr20 4912799 4912925 -61755080 - MIR SINE MIR -89 173 24 1715 89 4 4 chr20 4912996 4913232 -61754773 - AluSq SINE Alu -77 236 1 234 245 115 108 chr20 4913570 4913816 -61754189 + L1MC4 LINE L1 7616 7866 -176 1896 133 3 3 chr20 4913816 4914110 -61753895 - AluJo SINE Alu -18 294 1 234 245 115 108 chr20 4914110 4914149 -61753856 + L1MC4 LINE L1 7866 7903 -139 195 42 0 0 chr20 4914991 4915015 -61752990 + (GGGAGA)n Simple_repeat Simple_repeat 5 28 0 193 167 185 19 chr20 4916341 4916395 -61751610 - MIR SINE MIR -61 147 85 208 139 0 28 chr20 4919361 4919397 -61748608 + (GGAGA)n Simple_repeat Simple_repeat 4 38 0 1626 170 6 19 chr20 4920600 4920917 -61747088 - AluSq SINE Alu 0 313 1 335 298 118 32 chr20 4921043 4921389 -61746616 - L1M4 LINE L1 -2189 3957 3582 1725 162 28 0 chr20 4922765 4923049 -61744956 - AluJb SINE Alu -20 292 1 2367 197 108 43 chr20 4924623 4924758 -61743247 + MER77 LTR ERV1 1 126 -479 656 188 8 0 chr20 4924758 4924875 -61743130 + FLAM_C SINE Alu 1 118 -15 2367 197 108 43 chr20 4924875 4925303 -61742702 + MER77 LTR ERV1 126 601 -4 2064 128 20 0 chr20 4925583 4925881 -61742124 + AluSx SINE Alu 1 304 -8 684 273 114 0 chr20 4926482 4926658 -61741347 - MER58A DNA MER1_type -5 219 24 1483 185 21 11 chr20 4926801 4927088 -61740917 + AluJo SINE Alu 1 290 -22 1893 106 48 27 chr20 4927099 4927392 -61740613 + AluSx SINE Alu 11 309 -3 276 263 93 57 chr20 4927950 4928144 -61739861 + HAL1 LINE L1 619 819 -1688 351 256 159 77 chr20 4928161 4928708 -61739297 + L1M2 LINE L1 1757 2078 -1131 286 226 71 0 chr20 4928977 4929061 -61738944 + L1ME4a LINE L1 5348 5437 -2371 * 846 179 72 175 chr20 4929039 4929392 -61738613 + L1MC4 LINE L1 7491 7772 -270 1818 138 10 21 chr20 4929392 4929683 -61738322 + AluSx SINE Alu 1 288 -24 846 179 72 175 chr20 4929683 4929860 -61738145 + L1MC4 LINE L1 7772 7966 -76 991 146 73 26 chr20 4929909 4930101 -61737904 - MER46A DNA MER2_type -22 214 14 1850 132 10 10 chr20 4930310 4930599 -61737406 - AluSx SINE Alu -21 291 3 1951 138 0 13 chr20 4930836 4931140 -61736865 + AluSx SINE Alu 1 300 -12 1934 136 0 16 chr20 4931173 4931481 -61736524 - AluSx SINE Alu -9 303 1 180 97 0 0 chr20 4932574 4932605 -61735400 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1526 171 25 29 chr20 4932607 4932888 -61735117 - AluJo SINE Alu -30 282 3 475 290 154 0 chr20 4933127 4933352 -61734653 - MIR SINE MIR -13 249 13 189 0 0 0 chr20 4933413 4933434 -61734571 + (A)n Simple_repeat Simple_repeat 1 21 0 308 236 90 28 chr20 4934201 4934336 -61733669 + L1ME4a LINE L1 5588 5734 -387 2199 105 0 10 chr20 4934336 4934672 -61733333 - AluSx SINE Alu 0 312 1 437 295 82 75 chr20 4934935 4935506 -61732499 + L1MC4a LINE L1 5257 5780 -341 1413 157 98 0 chr20 4935506 4935787 -61732218 + AluSx SINE Alu 3 308 0 437 295 82 75 chr20 4935787 4935832 -61732173 + L1MC4a LINE L1 5780 5823 -298 271 255 172 25 chr20 4936083 4936240 -61731765 + L1ME4a LINE L1 5941 6120 -1 192 373 0 0 chr20 4936308 4936375 -61731630 - MIR SINE MIR -122 140 74 2189 113 0 0 chr20 4936411 4936722 -61731283 + AluSx SINE Alu 1 311 -1 633 182 84 28 chr20 4937161 4937304 -61730701 + L1MB5 LINE L1 6024 6174 0 1686 140 142 11 chr20 4937414 4937732 -61730273 + MER47A DNA MER2_type 4 366 0 1191 280 70 51 chr20 4940642 4940724 -61727281 + L1MC4a LINE L1 5353 5432 -2376 2219 94 0 0 chr20 4940724 4941001 -61727004 + AluSx SINE Alu 1 277 -35 1191 280 70 51 chr20 4941001 4941443 -61726562 + L1MC4a LINE L1 5432 5887 -1921 1886 147 32 38 chr20 4942055 4942368 -61725637 + AluJb SINE Alu 1 311 -1 1981 125 10 17 chr20 4943291 4943588 -61724417 + AluSx SINE Alu 1 295 -17 180 0 0 0 chr20 4943589 4943609 -61724396 + (CA)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr20 4943838 4943866 -61724139 + AT_rich Low_complexity Low_complexity 1 28 0 884 122 0 0 chr20 4943870 4943985 -61724020 + FLAM_C SINE Alu 1 115 -28 318 26 0 0 chr20 4943988 4944027 -61723978 + (GGGA)n Simple_repeat Simple_repeat 4 42 0 476 273 106 48 chr20 4945414 4945648 -61722357 + L2 LINE L2 2951 3209 -104 1599 173 34 20 chr20 4945648 4945943 -61722062 + AluJo SINE Alu 1 299 -13 476 273 106 48 chr20 4945943 4946019 -61721986 + L2 LINE L2 3209 3279 -34 262 279 69 48 chr20 4946056 4946275 -61721730 + L2 LINE L2 3042 3272 0 225 65 0 0 chr20 4947246 4947277 -61720728 + (T)n Simple_repeat Simple_repeat 1 31 0 625 221 59 0 chr20 4947860 4947996 -61720009 + MER3 DNA MER1_type 66 209 0 1635 190 0 7 chr20 4948797 4949086 -61718919 - AluJo SINE Alu -25 287 1 1865 147 3 46 chr20 4949715 4950041 -61717964 + AluJb SINE Alu 1 312 0 2285 97 7 0 chr20 4951282 4951572 -61716433 + AluSx SINE Alu 1 292 -20 465 262 87 0 chr20 4951594 4951720 -61716285 + FRAM SINE Alu 9 145 -31 36 77 0 0 chr20 4951720 4951798 -61716207 + AT_rich Low_complexity Low_complexity 1 78 0 228 67 0 0 chr20 4951811 4951841 -61716164 + (A)n Simple_repeat Simple_repeat 1 30 0 1369 179 0 36 chr20 4951845 4952096 -61715909 + AluJo SINE Alu 47 288 -24 1788 175 0 38 chr20 4952222 4952542 -61715463 + AluJb SINE Alu 3 310 -2 804 201 106 0 chr20 4953769 4953958 -61714047 + MER3 DNA MER1_type 1 209 0 1995 114 0 89 chr20 4954068 4954393 -61713612 + AluSx SINE Alu 2 297 -15 962 200 118 0 chr20 4954947 4955142 -61712863 + MER20 DNA MER1_type 1 218 -1 2271 98 3 3 chr20 4955325 4955621 -61712384 + AluSq SINE Alu 1 296 -17 2600 69 0 0 chr20 4955651 4955957 -61712048 + AluY SINE Alu 1 306 -5 2514 48 0 26 chr20 4956262 4956575 -61711430 + AluY SINE Alu 1 305 -6 809 141 0 16 chr20 4957204 4957332 -61710673 - FLAM_A SINE Alu -7 126 1 307 261 23 0 chr20 4958331 4958419 -61709586 - MIR SINE MIR -121 141 52 1967 134 46 0 chr20 4958776 4959060 -61708945 - AluJb SINE Alu -12 300 4 2192 69 62 14 chr20 4959080 4959370 -61708635 - AluSp SINE Alu -9 304 1 761 177 39 0 chr20 4959706 4959836 -61708169 + AluJo SINE Alu 2 136 -176 441 210 134 8 chr20 4960343 4960462 -61707543 + MER58C DNA MER1_type 44 177 -38 369 336 43 26 chr20 4960497 4960729 -61707276 + L1M4 LINE L1 4372 4607 -1539 1705 173 14 7 chr20 4960780 4961064 -61706941 + AluJb SINE Alu 1 286 -26 1199 150 34 49 chr20 4961429 4961620 -61706385 + L1MB1 LINE L1 5837 6030 -138 2201 119 0 0 chr20 4961620 4961914 -61706091 + AluSx SINE Alu 2 295 -17 1199 150 34 49 chr20 4961914 4961984 -61706021 + L1MB1 LINE L1 6030 6100 -68 760 171 0 79 chr20 4961988 4962140 -61705865 + AluJo SINE Alu 2 141 -171 386 122 0 144 chr20 4962147 4962186 -61705819 + L1MB1 LINE L1 6093 6094 -74 1993 129 4 0 chr20 4962186 4962465 -61705540 + AluSx SINE Alu 21 300 -12 386 122 0 144 chr20 4962465 4962531 -61705474 + L1MB1 LINE L1 6094 6168 0 183 196 294 0 chr20 4963036 4963087 -61704918 - MER5B DNA MER1_type -111 67 2 189 0 0 0 chr20 4963120 4963141 -61704864 + (A)n Simple_repeat Simple_repeat 1 21 0 676 162 103 0 chr20 4963690 4963807 -61704198 + FLAM_C SINE Alu 2 130 -13 1886 163 0 23 chr20 4964131 4964437 -61703568 + AluJb SINE Alu 1 299 -13 622 228 123 78 chr20 4964448 4964861 -61703144 + L1ME3 LINE L1 5672 6103 -59 2353 97 0 0 chr20 4964983 4965282 -61702723 - AluSg1 SINE Alu -10 299 1 1601 146 103 0 chr20 4966039 4966329 -61701676 - AluJo SINE Alu 0 317 1 450 296 23 0 chr20 4966337 4966469 -61701536 - MER112 DNA MER1_type -11 249 115 21 0 0 0 chr20 4967714 4967735 -61700270 + AT_rich Low_complexity Low_complexity 1 21 0 361 204 83 0 chr20 4968328 4968417 -61699588 - MIR SINE MIR -60 148 95 2268 114 0 7 chr20 4969749 4970057 -61697948 + AluSx SINE Alu 1 306 -6 350 298 6 6 chr20 4970367 4970525 -61697480 + (CA)n Simple_repeat Simple_repeat 1 158 0 1115 214 53 29 chr20 4972275 4972556 -61695449 + L1MB7 LINE L1 5897 6184 0 2331 110 3 3 chr20 4972567 4972877 -61695128 + AluSx SINE Alu 1 310 -2 494 293 82 37 chr20 4972906 4973261 -61694744 + HAL1b LINE L1 204 574 -774 2228 99 21 0 chr20 4973488 4973771 -61694234 + AluSg SINE Alu 1 289 -21 2127 124 0 0 chr20 4973771 4974069 -61693936 + AluSc SINE Alu 1 298 -11 22 56 0 0 chr20 4974069 4974105 -61693900 + AT_rich Low_complexity Low_complexity 1 36 0 2055 153 7 0 chr20 4974352 4974660 -61693345 + AluSx SINE Alu 1 310 -2 2383 99 0 6 chr20 4975160 4975474 -61692531 + AluSx SINE Alu 1 312 0 1335 199 27 40 chr20 4975718 4976019 -61691986 + AluJo SINE Alu 5 301 -11 378 0 0 0 chr20 4976102 4976144 -61691861 + (CA)n Simple_repeat Simple_repeat 2 43 0 1659 178 7 7 chr20 4976252 4976539 -61691466 + AluJb SINE Alu 1 287 -25 439 223 46 23 chr20 4977396 4977529 -61690476 + MLT1J LTR MaLR 55 158 -292 2526 84 3 0 chr20 4977543 4977852 -61690153 - AluSp SINE Alu -3 310 1 1375 195 17 31 chr20 4977918 4978210 -61689795 + AluJo SINE Alu 1 288 -24 219 69 0 0 chr20 4978328 4978357 -61689648 + (A)n Simple_repeat Simple_repeat 1 29 0 2416 90 0 0 chr20 4978364 4978664 -61689341 + AluSx SINE Alu 1 300 -12 1015 128 0 0 chr20 4979332 4979473 -61688532 - AluJb SINE Alu -171 141 1 2330 92 3 29 chr20 4979674 4979980 -61688025 + AluSp SINE Alu 1 298 -15 1163 173 61 78 chr20 4979990 4980232 -61687773 + L1ME LINE L1 5448 5693 -473 1766 167 27 0 chr20 4980232 4980525 -61687480 - AluJb SINE Alu -1 311 11 1677 184 0 33 chr20 4980535 4980839 -61687166 - AluJo SINE Alu -18 294 1 1163 173 61 78 chr20 4980839 4980880 -61687125 + L1ME LINE L1 5702 5737 -429 416 317 53 18 chr20 4980941 4981168 -61686837 + L1ME LINE L1 5425 5659 -511 1553 92 114 4 chr20 4981841 4982069 -61685936 - AluY SINE Alu 0 311 59 2347 109 3 3 chr20 5033276 5033588 -61634417 + AluSx SINE Alu 1 312 0 487 293 82 37 chr20 5033617 5033972 -61634033 + HAL1b LINE L1 204 574 -774 2201 102 21 0 chr20 5034199 5034482 -61633523 + AluSg SINE Alu 1 289 -21 2144 121 0 0 chr20 5034482 5034780 -61633225 + AluSc SINE Alu 1 298 -11 22 56 0 0 chr20 5034780 5034816 -61633189 + AT_rich Low_complexity Low_complexity 1 36 0 2109 146 7 0 chr20 5035063 5035371 -61632634 + AluSx SINE Alu 1 310 -2 2372 102 0 6 chr20 5035871 5036185 -61631820 + AluSx SINE Alu 1 312 0 930 131 0 0 chr20 5036332 5036462 -61631543 + AluJb SINE Alu 12 141 -171 2381 90 0 3 chr20 5037130 5037431 -61630574 - AluSx SINE Alu -12 300 1 219 69 0 0 chr20 5037438 5037467 -61630538 + (T)n Simple_repeat Simple_repeat 1 29 0 1375 195 17 31 chr20 5037585 5037877 -61630128 - AluJo SINE Alu -24 288 1 2470 93 3 0 chr20 5037943 5038253 -61629752 + AluSp SINE Alu 1 311 -2 439 216 82 12 chr20 5038267 5038401 -61629604 - MLT1J LTR MaLR -292 158 55 1659 178 7 7 chr20 5039258 5039545 -61628460 - AluJb SINE Alu -25 287 1 288 0 0 0 chr20 5039653 5039685 -61628320 + (TG)n Simple_repeat Simple_repeat 2 33 0 1335 199 27 40 chr20 5039768 5040069 -61627936 - AluJo SINE Alu -11 301 5 1590 185 21 11 chr20 5040255 5040542 -61627463 + AluJo SINE Alu 1 290 -22 2022 102 48 27 chr20 5040553 5040846 -61627159 + AluSx SINE Alu 11 309 -3 277 258 93 57 chr20 5041404 5041598 -61626407 + HAL1 LINE L1 619 819 -1688 225 241 102 9 chr20 5041771 5041879 -61626126 + HAL1 LINE L1 1045 1162 -1345 287 226 71 0 chr20 5042431 5042515 -61625490 + L1ME3 LINE L1 5348 5437 -2371 * 852 181 72 175 chr20 5042493 5042846 -61625159 + L1MC4 LINE L1 7491 7772 -270 1937 138 10 21 chr20 5042846 5043137 -61624868 + AluSx SINE Alu 1 288 -24 852 181 72 175 chr20 5043137 5043314 -61624691 + L1MC4 LINE L1 7772 7966 -76 998 146 73 26 chr20 5043363 5043555 -61624450 - MER46A DNA MER2_type -22 214 14 743 75 0 0 chr20 5043856 5043950 -61624055 + AluSg/x SINE Alu 202 295 -17 463 143 0 0 chr20 5043950 5044020 -61623985 + L1MB1 LINE L1 6031 6100 -68 760 171 0 79 chr20 5044024 5044176 -61623829 + AluJo SINE Alu 2 141 -171 386 122 0 144 chr20 5044183 5044222 -61623783 + L1MB1 LINE L1 6093 6094 -74 1993 129 4 0 chr20 5044222 5044501 -61623504 + AluSx SINE Alu 21 300 -12 386 122 0 144 chr20 5044501 5044567 -61623438 + L1MB1 LINE L1 6094 6168 0 183 196 294 0 chr20 5045072 5045123 -61622882 - MER5B DNA MER1_type -111 67 2 189 0 0 0 chr20 5045156 5045177 -61622828 + (A)n Simple_repeat Simple_repeat 1 21 0 676 162 103 0 chr20 5045726 5045843 -61622162 + FLAM_C SINE Alu 2 130 -13 896 130 0 0 chr20 5046167 5046298 -61621707 + FLAM_C SINE Alu 1 131 -2 237 204 0 19 chr20 5046407 5046461 -61621544 + L1ME LINE L1 5662 5714 -645 1696 165 29 0 chr20 5046478 5046751 -61621254 - AluJb SINE Alu -21 291 11 1677 184 0 33 chr20 5046761 5047065 -61620940 - AluJo SINE Alu -18 294 1 301 103 29 11 chr20 5047067 5047126 -61620879 + L1ME LINE L1 5702 5740 -422 416 317 53 18 chr20 5047167 5047394 -61620611 + L1ME3 LINE L1 5425 5659 -511 2039 91 91 3 chr20 5048067 5048353 -61619652 - AluY SINE Alu 0 311 1 893 70 118 0 chr20 5048445 5048600 -61619405 - MER30 DNA MER1_type -35 195 1 278 256 37 12 chr20 5048967 5049049 -61618956 - L2 LINE L2 -1866 1448 1365 23 0 0 0 chr20 5049108 5049131 -61618874 + AT_rich Low_complexity Low_complexity 1 23 0 2210 87 10 7 chr20 5049689 5049977 -61618028 + AluSx SINE Alu 1 289 -23 405 186 0 3 chr20 5050522 5050598 -61617407 + AluS SINE Alu 1 59 -249 346 228 148 89 chr20 5050700 5051024 -61616981 + L1ME3 LINE L1 5761 6103 -59 2353 97 0 0 chr20 5051146 5051445 -61616560 - AluSg1 SINE Alu -10 299 1 1601 146 103 0 chr20 5052200 5052486 -61615519 - AluJo SINE Alu 0 313 1 450 296 23 0 chr20 5052494 5052626 -61615379 - MER112 DNA MER1_type -11 249 115 21 0 0 0 chr20 5053871 5053892 -61614113 + AT_rich Low_complexity Low_complexity 1 21 0 361 204 83 0 chr20 5054485 5054574 -61613431 - MIR SINE MIR -60 148 95 2268 114 0 7 chr20 5055906 5056214 -61611791 + AluSx SINE Alu 1 306 -6 350 298 6 6 chr20 5056524 5056682 -61611323 + (CA)n Simple_repeat Simple_repeat 1 158 0 349 162 29 29 chr20 5058432 5058500 -61609505 + L1MB5 LINE L1 5897 5964 -210 1632 151 50 4 chr20 5058607 5058865 -61609140 - AluJo SINE Alu -40 272 3 426 298 30 38 chr20 5058867 5059132 -61608873 + L1ME4a LINE L1 5556 5818 -303 1116 134 34 6 chr20 5059256 5059435 -61608570 + AluJb SINE Alu 129 312 0 228 133 67 0 chr20 5059436 5059481 -61608524 + GA-rich Low_complexity Low_complexity 3 50 0 349 205 256 0 chr20 5059482 5059599 -61608406 + L1ME4a LINE L1 5964 6110 -11 1550 189 27 30 chr20 5060062 5060257 -61607748 + AluJo SINE Alu 1 196 -116 2212 117 0 0 chr20 5060257 5060556 -61607449 + AluSx SINE Alu 1 299 -13 1550 189 27 30 chr20 5060556 5060656 -61607349 + AluJo SINE Alu 196 295 -17 1159 190 90 13 chr20 5060974 5061274 -61606731 + MER33 DNA MER1_type 1 323 -1 333 0 0 0 chr20 5061382 5061419 -61606586 + (CA)n Simple_repeat Simple_repeat 2 38 0 2221 109 0 13 chr20 5063282 5063586 -61604419 - AluSg SINE Alu -10 300 1 2250 118 0 6 chr20 5063639 5063954 -61604051 - AluSp SINE Alu 0 313 1 1137 162 0 0 chr20 5064146 5064313 -61603692 - FRAM SINE Alu -8 168 2 277 224 0 0 chr20 5064462 5064520 -61603485 + L1MC/D LINE L1 5696 5753 -2055 1767 189 0 13 chr20 5065016 5065329 -61602676 + AluJb SINE Alu 1 309 -3 1619 165 74 3 chr20 5065750 5065865 -61602140 + AluJb SINE Alu 1 106 -206 279 0 0 0 chr20 5065865 5065896 -61602109 + (CA)n Simple_repeat Simple_repeat 2 32 0 1619 165 74 3 chr20 5065896 5066065 -61601940 + AluJb SINE Alu 106 305 -7 1727 154 45 17 chr20 5066074 5066366 -61601639 + AluJb SINE Alu 1 300 -12 23 0 0 0 chr20 5066438 5066461 -61601544 + AT_rich Low_complexity Low_complexity 1 23 0 2087 111 13 13 chr20 5067138 5067445 -61600560 - AluSx SINE Alu -5 307 1 2386 78 16 3 chr20 5068750 5069059 -61598946 + AluSp SINE Alu 1 313 0 2359 88 7 0 chr20 5069351 5069648 -61598357 - AluSx SINE Alu -13 299 1 2263 118 0 0 chr20 5069937 5070243 -61597762 - AluSx SINE Alu -6 306 1 2443 85 0 0 chr20 5070409 5070715 -61597290 - AluY SINE Alu -5 306 1 2222 96 3 3 chr20 5070956 5071248 -61596757 + AluSx SINE Alu 1 292 -20 2201 100 3 17 chr20 5071256 5071557 -61596448 + AluSc SINE Alu 2 298 -11 1720 169 14 7 chr20 5072113 5072397 -61595608 - AluJb SINE Alu -26 286 1 369 336 43 26 chr20 5072448 5072680 -61595325 - L1M4 LINE L1 -1539 4607 4372 450 202 134 8 chr20 5072715 5072834 -61595171 - MER58C DNA MER1_type -38 177 44 761 177 39 0 chr20 5073341 5073471 -61594534 - AluJo SINE Alu -176 136 2 2192 69 62 14 chr20 5073807 5074097 -61593908 + AluSp SINE Alu 1 304 -9 1967 134 46 0 chr20 5074117 5074401 -61593604 + AluJb SINE Alu 4 300 -12 307 261 23 0 chr20 5074758 5074846 -61593159 + MIR SINE MIR 52 141 -121 809 141 0 16 chr20 5075845 5075973 -61592032 + FLAM_A SINE Alu 1 126 -7 2526 45 0 26 chr20 5076602 5076915 -61591090 - AluY SINE Alu -6 305 1 2584 72 0 0 chr20 5077220 5077526 -61590479 - AluY SINE Alu -5 306 1 2243 101 3 7 chr20 5077556 5077853 -61590152 - AluSq SINE Alu -17 296 1 962 200 118 0 chr20 5078036 5078231 -61589774 - MER20 DNA MER1_type -1 218 1 2001 114 0 86 chr20 5078785 5079109 -61588896 - AluSx SINE Alu -15 297 2 787 206 106 0 chr20 5079220 5079409 -61588596 - MER3 DNA MER1_type 0 209 1 1788 175 0 38 chr20 5080636 5080956 -61587049 - AluJb SINE Alu -2 310 3 1234 180 8 40 chr20 5081082 5081332 -61586673 - AluJo SINE Alu -24 288 47 46 83 0 0 chr20 5081339 5081448 -61586557 + AT_rich Low_complexity Low_complexity 1 109 0 465 262 87 0 chr20 5081448 5081574 -61586431 - FRAM SINE Alu -31 145 9 2199 94 14 0 chr20 5081596 5081884 -61586121 - AluSx SINE Alu -20 292 1 554 152 0 48 chr20 5081885 5081990 -61586015 + MER58C DNA MER1_type 108 207 -8 2422 57 7 0 chr20 5082520 5082876 -61585129 - AluSp SINE Alu 0 358 1 731 168 23 15 chr20 5082899 5083030 -61584975 - FLAM_C SINE Alu -1 132 1 2512 21 0 3 chr20 5084170 5084492 -61583513 - AluY SINE Alu 0 321 1 559 119 0 24 chr20 5084604 5084688 -61583317 - MER4A LTR ERV1 0 664 583 814 204 26 0 chr20 5084699 5084851 -61583154 + AluJb SINE Alu 134 289 -23 820 139 13 19 chr20 5085219 5085377 -61582628 + MER5A DNA MER1_type 1 157 -32 310 197 0 0 chr20 5085456 5085517 -61582488 + MER5A DNA MER1_type 41 101 -88 770 245 65 0 chr20 5088051 5088251 -61579754 + MER58A DNA MER1_type 1 213 -11 227 339 9 9 chr20 5088528 5088637 -61579368 + L2 LINE L2 2950 3058 -214 186 259 92 61 chr20 5088719 5088850 -61579155 - MER5A DNA MER1_type -22 167 33 2153 115 3 3 chr20 5090249 5090545 -61577460 + AluSx SINE Alu 1 296 -16 207 0 0 0 chr20 5090604 5090627 -61577378 + (TCCA)n Simple_repeat Simple_repeat 3 25 0 342 291 42 4 chr20 5090659 5090786 -61577219 + L1ME1 LINE L1 6046 6332 -2 234 286 155 43 chr20 5091604 5091638 -61576367 - MIR SINE MIR -60 202 173 1921 143 0 14 chr20 5091638 5091932 -61576073 - AluJo SINE Alu -22 290 1 234 286 155 43 chr20 5091932 5092058 -61575947 - MIR SINE MIR -89 173 24 1817 89 4 4 chr20 5092129 5092365 -61575640 - AluSq SINE Alu -77 236 1 234 245 115 108 chr20 5092703 5092949 -61575056 + L1MC4 LINE L1 7616 7866 -176 1919 129 3 3 chr20 5092949 5093243 -61574762 - AluJo SINE Alu -18 294 1 234 245 115 108 chr20 5093243 5093282 -61574723 + L1MC4 LINE L1 7866 7903 -139 195 42 0 0 chr20 5094124 5094148 -61573857 + (GGGAGA)n Simple_repeat Simple_repeat 5 28 0 193 167 185 19 chr20 5095474 5095528 -61572477 - MIR SINE MIR -61 147 85 1626 170 6 19 chr20 5099716 5100033 -61567972 - AluSq SINE Alu 0 313 1 335 298 118 32 chr20 5100159 5100505 -61567500 - L1M4 LINE L1 -2189 3957 3582 1725 162 28 0 chr20 5101881 5102165 -61565840 - AluJb SINE Alu -20 292 1 2322 196 110 46 chr20 5103741 5103876 -61564129 + MER77 LTR ERV1 1 126 -479 659 188 8 0 chr20 5103876 5103993 -61564012 + FLAM_C SINE Alu 1 118 -15 2322 196 110 46 chr20 5103993 5104422 -61563583 + MER77 LTR ERV1 126 601 -4 1983 132 24 0 chr20 5104702 5104997 -61563008 + AluSq SINE Alu 1 302 -11 700 267 114 0 chr20 5105598 5105774 -61562231 - MER58A DNA MER1_type -5 219 24 1429 129 0 22 chr20 5105973 5106198 -61561807 - AluSx SINE Alu -92 220 1 180 97 0 0 chr20 5107292 5107323 -61560682 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1532 171 25 25 chr20 5107325 5107605 -61560400 - AluJo SINE Alu -30 282 3 496 286 154 0 chr20 5107844 5108069 -61559936 - MIR SINE MIR -13 249 13 198 0 0 0 chr20 5108130 5108152 -61559853 + (A)n Simple_repeat Simple_repeat 1 22 0 293 243 90 28 chr20 5108919 5109054 -61558951 + L1ME4a LINE L1 5588 5734 -387 2199 105 0 10 chr20 5109054 5109390 -61558615 - AluSx SINE Alu 0 312 1 398 295 84 77 chr20 5109653 5110226 -61557779 + L1MC4a LINE L1 5257 5780 -341 1408 154 99 0 chr20 5110226 5110505 -61557500 + AluSx SINE Alu 5 308 0 398 295 84 77 chr20 5110505 5110550 -61557455 + L1MC4a LINE L1 5780 5823 -298 271 255 172 25 chr20 5110801 5110958 -61557047 + L1ME4a LINE L1 5941 6120 -1 209 358 0 0 chr20 5111026 5111093 -61556912 - MIR SINE MIR -122 140 74 2189 113 0 0 chr20 5111129 5111440 -61556565 + AluSx SINE Alu 1 311 -1 633 182 84 28 chr20 5111879 5112022 -61555983 + L1MB5 LINE L1 6024 6174 0 1686 140 142 11 chr20 5112132 5112450 -61555555 + MER47A DNA MER2_type 4 366 0 1133 289 70 47 chr20 5115313 5115442 -61552563 + L1MC4a LINE L1 5303 5428 -2380 2094 94 0 0 chr20 5115442 5115719 -61552286 + AluSx SINE Alu 1 277 -35 1133 289 70 47 chr20 5115719 5116161 -61551844 + L1MC4a LINE L1 5428 5887 -1921 1769 147 32 38 chr20 5116773 5117086 -61550919 + AluJb SINE Alu 1 311 -1 1857 125 10 17 chr20 5118009 5118306 -61549699 + AluSx SINE Alu 1 295 -17 180 0 0 0 chr20 5118307 5118327 -61549678 + (CA)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr20 5118556 5118584 -61549421 + AT_rich Low_complexity Low_complexity 1 28 0 833 122 0 0 chr20 5118588 5118703 -61549302 + FLAM_C SINE Alu 1 115 -28 318 26 0 0 chr20 5118706 5118745 -61549260 + (GGGA)n Simple_repeat Simple_repeat 4 42 0 204 292 266 18 chr20 5119878 5120104 -61547901 + L2 LINE L2 2538 2819 -495 592 267 106 48 chr20 5120136 5120370 -61547635 + L2 LINE L2 2951 3209 -104 1499 169 34 20 chr20 5120370 5120665 -61547340 + AluJo SINE Alu 1 299 -13 592 267 106 48 chr20 5120665 5120741 -61547264 + L2 LINE L2 3209 3279 -34 322 283 69 48 chr20 5120778 5120997 -61547008 + L2 LINE L2 3042 3272 0 207 69 0 0 chr20 5121968 5121997 -61546008 + (T)n Simple_repeat Simple_repeat 1 29 0 627 221 59 0 chr20 5122580 5122716 -61545289 + MER3 DNA MER1_type 66 209 0 1526 190 0 7 chr20 5123517 5123806 -61544199 - AluJo SINE Alu -25 287 1 1745 147 3 46 chr20 5124435 5124761 -61543244 + AluJb SINE Alu 1 312 0 1424 107 0 47 chr20 5126033 5126266 -61541739 + AluSg/x SINE Alu 85 306 -6 816 162 0 0 chr20 5126266 5126383 -61541622 - AluJo/FLAM SINE Alu -185 117 1 384 143 57 0 chr20 5126521 5126591 -61541414 + FLAM_A SINE Alu 60 133 0 2206 92 0 3 chr20 5127570 5127864 -61540141 + AluSg SINE Alu 14 306 -4 804 151 0 0 chr20 5127973 5128092 -61539913 + FLAM_C SINE Alu 7 125 -18 22 35 0 0 chr20 5128099 5128128 -61539877 + AT_rich Low_complexity Low_complexity 1 29 0 438 244 98 83 chr20 5128322 5128666 -61539339 + L1ME4a LINE L1 5132 5486 -692 525 230 155 24 chr20 5128771 5129062 -61538943 + L1ME4a LINE L1 5635 5963 -158 2084 110 7 7 chr20 5129067 5129376 -61538629 - AluSx SINE Alu -3 309 1 450 252 132 13 chr20 5129967 5130126 -61537879 + MER5B DNA MER1_type 1 178 0 189 0 0 0 chr20 5130207 5130228 -61537777 + (TCCC)n Simple_repeat Simple_repeat 4 24 0 1955 152 0 0 chr20 5130235 5130545 -61537460 - AluY SINE Alu -1 310 1 2217 87 0 0 chr20 5130547 5130835 -61537170 - AluSg SINE Alu -20 290 3 2680 173 46 82 chr20 5130971 5131368 -61536637 + L1MB7 LINE L1 4553 4963 -1190 2293 88 3 0 chr20 5131368 5131664 -61536341 + AluSp SINE Alu 1 297 -16 2680 173 46 82 chr20 5131664 5131909 -61536096 + L1MB7 LINE L1 4963 5215 -938 2310 76 3 0 chr20 5131909 5132210 -61535795 + AluY SINE Alu 1 302 -9 2680 173 46 82 chr20 5132210 5132231 -61535774 + L1MB7 LINE L1 5215 5235 -918 2264 67 3 0 chr20 5132231 5132515 -61535490 + AluSp SINE Alu 14 298 -15 2680 173 46 82 chr20 5132515 5132673 -61535332 + L1MB7 LINE L1 5235 5340 -813 701 175 58 7 chr20 5132679 5132816 -61535189 + FAM SINE Alu 14 157 -28 2355 68 3 0 chr20 5132816 5133111 -61534894 + AluY SINE Alu 1 296 -15 3313 165 122 37 chr20 5133133 5133400 -61534605 + L1MB7 LINE L1 5317 5560 -624 1965 134 0 3 chr20 5133400 5133699 -61534306 + AluSc SINE Alu 1 298 -11 3313 165 122 37 chr20 5133699 5133994 -61534011 + L1MB7 LINE L1 5560 5829 -355 2095 121 0 0 chr20 5133994 5134292 -61533713 - AluSx SINE Alu -14 298 1 3313 165 122 37 chr20 5134292 5134516 -61533489 + L1MB7 LINE L1 5829 6171 -13 689 159 48 8 chr20 5134730 5134856 -61533149 + FLAM_C SINE Alu 1 131 -2 1919 123 0 0 chr20 5134890 5135158 -61532847 - AluSq SINE Alu -45 268 1 432 55 0 0 chr20 5135178 5135233 -61532772 + (CA)n Simple_repeat Simple_repeat 2 56 0 2390 52 7 0 chr20 5136109 5136400 -61531605 + AluY SINE Alu 1 293 -18 2051 118 0 10 chr20 5136559 5136856 -61531149 + AluSq SINE Alu 1 294 -19 1764 114 21 21 chr20 5136862 5136998 -61531007 + AluSq SINE Alu 1 136 -177 2133 129 0 0 chr20 5136998 5137307 -61530698 + AluSc SINE Alu 1 309 0 1764 114 21 21 chr20 5137307 5137451 -61530554 + AluSq SINE Alu 135 281 -32 2241 85 7 13 chr20 5137497 5137803 -61530202 + AluSg SINE Alu 1 304 -6 1389 126 0 9 chr20 5137856 5138070 -61529935 - MER46B DNA MER2_type 0 236 25 838 241 19 0 chr20 5138070 5138228 -61529777 + AluJb SINE Alu 135 295 -17 648 134 228 0 chr20 5138228 5138355 -61529650 - MER46B DNA MER2_type -201 35 5 274 252 183 15 chr20 5138448 5138579 -61529426 + MLT1J1 LTR MaLR 33 185 -261 260 269 0 0 chr20 5138629 5138681 -61529324 + MLT1J2 LTR MaLR 280 331 -119 671 198 9 0 chr20 5138781 5138897 -61529108 + FLAM_C SINE Alu 2 118 -25 1888 135 3 10 chr20 5138902 5139214 -61528791 - AluSx SINE Alu -2 310 1 1689 122 48 10 chr20 5139242 5139537 -61528468 + AluSq SINE Alu 1 306 -7 1264 205 7 17 chr20 5139653 5139941 -61528064 - AluJo SINE Alu -16 296 12 2067 111 0 0 chr20 5139984 5140263 -61527742 + AluSg SINE Alu 1 279 -31 396 0 0 0 chr20 5140263 5140307 -61527698 + (CA)n Simple_repeat Simple_repeat 1 44 0 231 286 0 12 chr20 5140360 5140444 -61527561 + L1M4 LINE L1 4519 4601 -1545 1577 80 0 0 chr20 5140455 5140654 -61527351 + AluSg/x SINE Alu 86 284 -28 2249 88 3 7 chr20 5141046 5141352 -61526653 - AluSp SINE Alu -8 305 1 1019 154 0 154 chr20 5141426 5141539 -61526466 + MER46A DNA MER2_type 1 47 -2684 2065 75 0 91 chr20 5141539 5141870 -61526135 + AluY SINE Alu 1 301 -10 1019 154 0 154 chr20 5141870 5142035 -61525970 + MER46A DNA MER2_type 47 236 0 1377 127 79 89 chr20 5142342 5142633 -61525372 + AluJb SINE Alu 1 288 -24 251 94 0 0 chr20 5142696 5142728 -61525277 - MER58A DNA MER1_type -3 221 190 283 208 0 0 chr20 5142743 5142796 -61525209 - MER58A DNA MER1_type -15 92 40 * 440 236 0 0 chr20 5142795 5142884 -61525121 + MER5A DNA MER1_type 17 105 -84 1271 136 6 14 chr20 5143005 5143045 -61524960 + AluSq SINE Alu 134 173 -140 1984 113 78 0 chr20 5143045 5143328 -61524677 + AluSg SINE Alu 1 305 -5 1271 136 6 14 chr20 5143328 5143507 -61524498 + AluSq SINE Alu 173 313 0 324 357 40 20 chr20 5144229 5144428 -61523577 + MIR SINE MIR 27 229 -33 2399 110 0 0 chr20 5144948 5145258 -61522747 + AluSg SINE Alu 1 310 0 718 243 283 28 chr20 5145421 5146020 -61521985 + L2 LINE L2 2231 2676 -637 1262 201 67 62 chr20 5146020 5146177 -61521828 + MLT1B LTR MaLR 1 156 -234 1471 161 113 0 chr20 5146177 5146335 -61521670 - AluJb SINE Alu -20 292 95 216 0 0 0 chr20 5146335 5146359 -61521646 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1471 161 113 0 chr20 5146359 5146448 -61521557 - AluJb SINE Alu -217 95 17 1262 201 67 62 chr20 5146448 5146678 -61521327 + MLT1B LTR MaLR 156 390 0 718 243 283 28 chr20 5146678 5146891 -61521114 + L2 LINE L2 2676 3312 -1 2290 104 7 0 chr20 5147348 5147647 -61520358 - AluSx SINE Alu -11 301 1 942 140 0 7 chr20 5148099 5148235 -61519770 - FLAM_C SINE Alu -8 135 1 227 286 66 22 chr20 5148895 5148986 -61519019 - MIR SINE MIR -92 116 22 24 0 0 0 chr20 5149684 5149708 -61518297 + GC_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr20 5149742 5149777 -61518228 + GC_rich Low_complexity Low_complexity 1 35 0 32 111 0 0 chr20 5149798 5149942 -61518063 + GC_rich Low_complexity Low_complexity 1 144 0 24 32 0 0 chr20 5150050 5150081 -61517924 + GC_rich Low_complexity Low_complexity 1 31 0 218 186 0 86 chr20 5150094 5150164 -61517841 + C-rich Low_complexity Low_complexity 1 64 0 340 211 0 0 chr20 5150612 5150680 -61517325 - MER5A DNA MER1_type -81 101 32 406 259 41 41 chr20 5150731 5150901 -61517104 + MER5A DNA MER1_type 18 187 -2 * 904 178 0 6 chr20 5150754 5150917 -61517088 - MER5A DNA MER1_type -27 162 1 864 220 23 0 chr20 5151264 5151437 -61516568 - AluJb SINE Alu -2 310 134 533 119 0 24 chr20 5151448 5151532 -61516473 + MER4A LTR ERV1 583 664 0 2505 21 0 3 chr20 5151644 5151966 -61516039 + AluY SINE Alu 1 321 0 755 168 23 15 chr20 5153106 5153237 -61514768 + FLAM_C SINE Alu 1 132 -1 2427 57 7 0 chr20 5153260 5153612 -61514393 + AluSp SINE Alu 1 354 0 1368 118 3 132 chr20 5154142 5154248 -61513757 - MER58D DNA MER1_type -2042 378 260 2428 72 7 0 chr20 5154248 5154539 -61513466 + AluSq SINE Alu 1 293 -20 1368 118 3 132 chr20 5154539 5154630 -61513375 - MER58D DNA MER1_type -2160 260 243 2219 113 0 7 chr20 5154630 5154940 -61513065 - AluSg SINE Alu -2 308 1 1368 118 3 132 chr20 5154940 5155090 -61512915 - MER58D DNA MER1_type -2177 243 75 1776 124 97 0 chr20 5155090 5155383 -61512622 - AluSx SINE Alu 0 318 1 315 71 0 0 chr20 5155491 5155533 -61512472 + (TG)n Simple_repeat Simple_repeat 2 43 0 298 204 0 117 chr20 5155534 5155637 -61512368 + L1ME3A LINE L1 5688 5778 -2030 1413 151 34 50 chr20 5155747 5155791 -61512214 - L1MB8 LINE L1 -13 6167 6124 1976 174 0 0 chr20 5155791 5156102 -61511903 + AluSx SINE Alu 1 311 -1 1413 151 34 50 chr20 5156102 5156383 -61511622 - L1MB8 LINE L1 -56 6124 5851 276 155 0 13 chr20 5156389 5156417 -61511588 + Alu SINE Alu 247 247 -55 417 97 0 108 chr20 5156417 5156456 -61511549 - L1MB4 LINE L1 0 6180 6155 2429 91 0 0 chr20 5156456 5156752 -61511253 - AluSq SINE Alu -17 296 1 417 97 0 108 chr20 5156752 5156805 -61511200 - L1MB4 LINE L1 -25 6155 6098 276 155 0 13 chr20 5156805 5156841 -61511164 + Alu SINE Alu 247 282 -20 875 104 64 0 chr20 5157284 5157409 -61510596 - FLAM_C SINE Alu 0 133 1 363 358 64 9 chr20 5157460 5157790 -61510215 + L2 LINE L2 1758 2105 -1209 290 306 65 9 chr20 5158037 5158145 -61509860 + L2 LINE L2 3136 3249 -23 2476 156 105 49 chr20 5158287 5158356 -61509649 - MLT2B2 LTR ERVL 0 515 451 2651 43 0 0 chr20 5158356 5158656 -61509349 + AluY SINE Alu 1 300 -11 2476 156 105 49 chr20 5158656 5159072 -61508933 - MLT2B2 LTR ERVL -64 451 3 1472 190 11 7 chr20 5159150 5159283 -61508722 + AluJb SINE Alu 1 132 -180 2082 116 24 0 chr20 5159283 5159577 -61508428 + AluSq SINE Alu 1 301 -12 1472 190 11 7 chr20 5159577 5159722 -61508283 + AluJb SINE Alu 132 280 -32 858 126 0 0 chr20 5159727 5159862 -61508143 + (GGAA)n Simple_repeat Simple_repeat 4 138 0 207 0 0 0 chr20 5160051 5160074 -61507931 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 579 265 85 5 chr20 5160079 5160279 -61507726 + L1ME3A LINE L1 5935 6150 -20 2243 92 0 41 chr20 5160284 5160599 -61507406 - AluSq SINE Alu -9 304 3 391 279 19 51 chr20 5160832 5160990 -61507015 + MIR SINE MIR 60 212 -50 219 320 0 40 chr20 5161228 5161303 -61506702 - L2 LINE L2 -13 3259 3188 2321 108 3 6 chr20 5161312 5161626 -61506379 + AluSp SINE Alu 1 313 0 2355 101 0 0 chr20 5161632 5161929 -61506076 + AluSx SINE Alu 1 297 -15 370 150 17 0 chr20 5162459 5162519 -61505486 - AluJ/FLAM SINE Alu -241 61 1 610 280 134 18 chr20 5162671 5162966 -61505039 - L2 LINE L2 -246 3067 2727 1055 183 10 5 chr20 5162966 5163163 -61504842 - AluJo SINE Alu -11 301 104 236 158 0 92 chr20 5163183 5163221 -61504784 + A-rich Low_complexity Low_complexity 2 31 -39 2414 98 0 0 chr20 5163221 5163526 -61504479 + AluSc SINE Alu 1 305 -4 236 158 0 92 chr20 5163526 5163563 -61504442 + A-rich Low_complexity Low_complexity 31 70 0 722 118 0 96 chr20 5163573 5163709 -61504296 - FLAM_C SINE Alu -10 133 11 862 288 87 78 chr20 5163712 5163889 -61504116 - L2 LINE L2 -593 2721 2547 2458 68 3 10 chr20 5163889 5164196 -61503809 - AluY SINE Alu -6 305 1 2459 90 3 0 chr20 5164201 5164512 -61503493 - AluSx SINE Alu 0 312 1 862 288 87 78 chr20 5164512 5164533 -61503472 - L2 LINE L2 -770 2544 2525 2268 133 0 0 chr20 5164533 5164842 -61503163 + AluSx SINE Alu 1 309 -3 862 288 87 78 chr20 5164842 5165306 -61502699 - L2 LINE L2 -789 2525 2046 674 216 0 0 chr20 5165417 5165533 -61502472 + FLAM_C SINE Alu 1 116 -17 204 200 0 0 chr20 5165534 5165594 -61502411 + T-rich Low_complexity Low_complexity 1 60 0 2345 119 0 0 chr20 5165666 5165977 -61502028 + AluSx SINE Alu 1 311 -1 2221 121 7 0 chr20 5165977 5166282 -61501723 + AluSp SINE Alu 1 307 -6 320 247 14 0 chr20 5166282 5166355 -61501650 - LTR16A1 LTR ERVL -14 443 370 492 239 64 0 chr20 5166356 5166465 -61501540 - FLAM_C SINE Alu -24 119 4 916 184 19 6 chr20 5166539 5166697 -61501308 + FRAM SINE Alu 1 160 -16 441 272 45 75 chr20 5166706 5166971 -61501034 - LTR16A1 LTR ERVL -141 316 60 1703 136 0 32 chr20 5167071 5167322 -61500683 + AluSq SINE Alu 1 243 -70 343 212 0 59 chr20 5167459 5167544 -61500461 + MIR SINE MIR 77 156 -106 2018 132 28 0 chr20 5167563 5167850 -61500155 + AluSx SINE Alu 1 295 -17 646 179 37 49 chr20 5167877 5168039 -61499966 - MIR SINE MIR -11 251 92 1869 155 24 10 chr20 5168039 5168335 -61499670 + AluJb SINE Alu 6 305 -7 671 180 0 33 chr20 5168415 5168537 -61499468 + FLAM_C SINE Alu 1 118 -15 2377 108 0 0 chr20 5168744 5169050 -61498955 + AluSx SINE Alu 7 312 0 294 327 192 24 chr20 5169122 5169461 -61498544 - L2 LINE L2 0 3313 2918 519 241 21 7 chr20 5169820 5169961 -61498044 - L1ME3 LINE L1 -50 6112 5970 189 0 0 0 chr20 5169986 5170007 -61497998 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 741 68 0 0 chr20 5170033 5170121 -61497884 + AluSg SINE Alu 52 139 -171 2193 104 0 22 chr20 5170121 5170437 -61497568 + AluSc SINE Alu 1 309 0 1156 233 42 45 chr20 5170437 5170565 -61497440 - L1MC4 LINE L1 -228 7814 7687 2571 74 0 0 chr20 5170565 5170876 -61497129 - AluY SINE Alu 0 311 1 1156 233 42 45 chr20 5170876 5170982 -61497023 - L1MC4 LINE L1 -355 7687 7582 1926 154 30 7 chr20 5170982 5171287 -61496718 - AluJb SINE Alu 0 312 1 1156 233 42 45 chr20 5171287 5171451 -61496554 - L1MC4 LINE L1 -460 7582 7416 429 228 0 0 chr20 5171458 5171550 -61496455 - AluJ/FRAM SINE Alu 0 312 221 2288 105 20 0 chr20 5171583 5171887 -61496118 - AluSx SINE Alu 0 312 3 791 142 39 0 chr20 5171896 5172023 -61495982 - FLAM_C SINE Alu 0 133 2 4156 170 47 49 chr20 5172056 5172090 -61495915 - L1MB3 LINE L1 -1 6182 6149 2310 97 3 3 chr20 5172090 5172390 -61495615 - AluSq SINE Alu -13 300 1 4156 170 47 49 chr20 5172390 5173140 -61494865 - L1MB3 LINE L1 -34 6149 5399 2360 112 0 6 chr20 5173140 5173454 -61494551 - AluSx SINE Alu 0 312 1 4156 170 47 49 chr20 5173454 5173482 -61494523 - L1MB3 LINE L1 -784 5399 5372 1901 174 10 3 chr20 5173482 5173792 -61494213 + AluJb SINE Alu 1 312 0 4156 170 47 49 chr20 5173792 5173817 -61494188 - L1MB3 LINE L1 -811 5372 5348 776 131 54 31 chr20 5173817 5173947 -61494058 - FLAM_A SINE Alu 0 133 1 4156 170 47 49 chr20 5173947 5174117 -61493888 - L1MB3 LINE L1 -835 5348 5155 2197 107 7 3 chr20 5174128 5174419 -61493586 + AluSg SINE Alu 1 292 -18 733 68 34 59 chr20 5174419 5174528 -61493477 - AluJo/FRAM SINE Alu -21 291 184 690 13 0 0 chr20 5174534 5174613 -61493392 + (TTTTC)n Simple_repeat Simple_repeat 2 80 0 981 185 0 0 chr20 5174615 5174772 -61493233 - AluJb SINE Alu -31 281 125 400 256 47 0 chr20 5174782 5174868 -61493137 + L1MC4 LINE L1 6614 6703 -1339 745 156 62 8 chr20 5174869 5174997 -61493008 - AluJb SINE Alu -176 136 2 281 79 0 0 chr20 5175023 5175061 -61492944 - MER4D LTR ERV1 -74 798 761 1454 209 38 3 chr20 5175070 5175409 -61492596 - L1M4 LINE L1 -950 5196 4846 441 36 0 0 chr20 5175411 5175466 -61492539 + (TCTCCC)n Simple_repeat Simple_repeat 1 55 0 5563 79 39 9 chr20 5175466 5176252 -61491753 + SVA Other Other 57 866 -520 6765 66 34 28 chr20 5176267 5177219 -61490786 + SVA Other Other 430 1386 0 938 204 0 0 chr20 5177231 5177417 -61490588 - L1M4 LINE L1 -1287 4859 4674 2284 131 0 0 chr20 5177666 5177978 -61490027 + AluSx SINE Alu 1 312 0 2125 102 3 31 chr20 5178215 5178540 -61489465 + AluSp SINE Alu 1 317 0 727 183 21 14 chr20 5178732 5178874 -61489131 + FRAM SINE Alu 26 168 -8 831 254 26 29 chr20 5179124 5179396 -61488609 + LTR16C LTR ERVL 213 483 -8 356 234 39 39 chr20 5179406 5179488 -61488517 - L1MC4a LINE L1 -1902 5906 5822 2117 136 3 0 chr20 5179488 5179782 -61488223 - AluJb SINE Alu -4 308 14 356 234 39 39 chr20 5179782 5179827 -61488178 - L1MC4a LINE L1 -1985 5823 5779 215 225 0 0 chr20 5180079 5180119 -61487886 + CT-rich Low_complexity Low_complexity 4 43 0 300 231 0 44 chr20 5180200 5180291 -61487714 + Charlie8 DNA MER1_type 75 161 -2256 2079 98 0 52 chr20 5180335 5180641 -61487364 + AluSq SINE Alu 1 290 -23 2179 121 0 13 chr20 5180861 5181029 -61486976 - AluSx SINE Alu -11 301 137 2429 91 0 13 chr20 5181029 5181336 -61486669 - AluSx SINE Alu -9 303 1 2179 121 0 13 chr20 5181336 5181472 -61486533 - AluSx SINE Alu -175 137 1 711 207 0 0 chr20 5181515 5181636 -61486369 + FRAM SINE Alu 25 145 -31 1383 85 0 0 chr20 5181637 5181801 -61486204 - AluSp SINE Alu -14 299 136 201 147 0 0 chr20 5181814 5181848 -61486157 + (CAA)n Simple_repeat Simple_repeat 2 35 0 622 167 28 0 chr20 5181848 5181956 -61486049 - MER5A DNA MER1_type -75 114 4 253 118 0 0 chr20 5182331 5182365 -61485640 - MIR SINE MIR -150 112 79 1297 165 180 19 chr20 5182532 5182646 -61485359 + AluJo SINE Alu 1 95 -217 2256 136 0 0 chr20 5182646 5182955 -61485050 + AluSx SINE Alu 1 309 -3 1297 165 180 19 chr20 5182955 5183107 -61484898 + AluJo SINE Alu 95 310 -2 2257 115 0 0 chr20 5183556 5183852 -61484153 - AluSx SINE Alu -16 296 1 1652 188 20 3 chr20 5183861 5184153 -61483852 - AluJo SINE Alu -15 297 1 1626 180 6 60 chr20 5184165 5184481 -61483524 - AluJb SINE Alu -13 299 1 2284 107 10 13 chr20 5184517 5184826 -61483179 - AluSc SINE Alu 0 309 2 839 258 80 103 chr20 5185044 5185120 -61482885 + L1ME2 LINE L1 3375 3451 -2695 1664 93 14 0 chr20 5185120 5185336 -61482669 + AluSq SINE Alu 1 219 -94 839 258 80 103 chr20 5185336 5185744 -61482261 + L1ME2 LINE L1 3451 3848 -2298 673 86 0 32 chr20 5185748 5185841 -61482164 + AluSg/x SINE Alu 157 246 -63 1228 157 32 9 chr20 5185842 5185875 -61482130 + AluSg/x SINE Alu 83 114 -196 222 37 0 0 chr20 5185875 5185902 -61482103 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 1228 157 32 9 chr20 5185902 5186084 -61481921 + AluSg/x SINE Alu 114 303 -7 2274 113 7 0 chr20 5186088 5186398 -61481607 + AluSq SINE Alu 1 312 -1 408 73 0 0 chr20 5186399 5186467 -61481538 + AluSp/q SINE Alu 246 313 0 402 267 26 35 chr20 5186469 5186585 -61481420 + L1ME2 LINE L1 5152 5266 -880 180 0 0 0 chr20 5186593 5186613 -61481392 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2340 94 17 0 chr20 5186642 5186939 -61481066 + AluSq SINE Alu 1 302 -11 252 267 88 13 chr20 5186965 5187167 -61480838 + L1ME2 LINE L1 5272 5485 -677 1952 147 0 66 chr20 5187193 5187326 -61480679 + AluJb SINE Alu 1 141 -171 1923 134 14 3 chr20 5187326 5187617 -61480388 - AluSx SINE Alu -17 295 2 1952 147 0 66 chr20 5187617 5187816 -61480189 + AluJb SINE Alu 141 311 -1 278 231 39 0 chr20 5187824 5187902 -61480103 - MLT1L LTR MaLR -13 602 522 825 205 12 6 chr20 5187908 5188074 -61479931 + AluJb SINE Alu 137 303 -9 644 303 59 28 chr20 5188543 5188595 -61479410 + L1ME2 LINE L1 5482 5531 -633 1995 148 10 3 chr20 5188595 5188893 -61479112 + AluJb SINE Alu 6 305 -7 849 119 0 37 chr20 5188897 5189031 -61478974 + FLAM_C SINE Alu 1 129 -4 644 303 59 28 chr20 5189031 5189428 -61478577 + L1ME2 LINE L1 5533 5931 -233 2061 142 3 3 chr20 5189606 5189909 -61478096 + AluSx SINE Alu 1 303 -9 488 253 177 0 chr20 5190064 5190222 -61477783 - MER5A DNA MER1_type 0 189 4 1672 65 28 0 chr20 5190485 5190700 -61477305 - AluSg/x SINE Alu -8 302 82 2435 75 6 40 chr20 5190795 5191117 -61476888 - AluSq SINE Alu -2 311 1 1086 98 0 0 chr20 5191120 5191252 -61476753 - AluSp SINE Alu -181 132 1 1899 166 13 0 chr20 5191351 5191652 -61476353 - AluJb SINE Alu -7 305 1 1777 174 13 23 chr20 5192177 5192481 -61475524 - AluJb SINE Alu -11 301 1 586 274 208 0 chr20 5192570 5192782 -61475223 + MIR SINE MIR 4 259 -3 457 279 104 13 chr20 5192787 5192941 -61475064 + MER5B DNA MER1_type 9 176 -2 2003 136 3 32 chr20 5192980 5193290 -61474715 - AluSq SINE Alu -12 301 1 2229 101 28 0 chr20 5193675 5193962 -61474043 + AluSg1 SINE Alu 1 295 -14 2298 93 0 7 chr20 5193983 5194283 -61473722 + AluSx SINE Alu 1 298 -14 3033 187 45 77 chr20 5194433 5195048 -61472957 + L1 LINE L1 3842 4424 -1722 2192 108 3 0 chr20 5195048 5195353 -61472652 + AluSp SINE Alu 1 306 -7 3033 187 45 77 chr20 5195353 5195580 -61472425 + L1 LINE L1 4424 4657 -1489 1083 107 0 47 chr20 5195755 5195924 -61472081 - AluSg/x SINE Alu -18 294 134 2010 94 40 0 chr20 5195924 5196199 -61471806 - AluSq SINE Alu -14 299 14 24 0 0 0 chr20 5196270 5196294 -61471711 + AT_rich Low_complexity Low_complexity 1 24 0 321 156 0 31 chr20 5196297 5196361 -61471644 - FRAM SINE Alu -67 99 38 387 220 2 2 chr20 5196365 5196442 -61471563 + AluJ/FLAM SINE Alu 2 66 -236 738 165 0 24 chr20 5196443 5196570 -61471435 + AluJo/FRAM SINE Alu 164 287 -25 389 152 0 0 chr20 5196595 5196661 -61471344 + FAM SINE Alu 114 179 0 238 65 22 22 chr20 5196697 5196743 -61471262 + (TAAAAA)n Simple_repeat Simple_repeat 5 50 0 1677 147 28 3 chr20 5196780 5197065 -61470940 - AluSx SINE Alu -18 294 3 313 223 80 63 chr20 5197165 5197340 -61470665 - L1MC4a LINE L1 -1788 6020 5843 1721 134 11 0 chr20 5197382 5197651 -61470354 - AluSx SINE Alu -5 307 36 290 266 64 18 chr20 5197689 5197798 -61470207 - HAL1b LINE L1 -776 572 459 305 278 93 96 chr20 5197802 5197908 -61470097 - HAL1b LINE L1 -931 417 312 1610 133 28 0 chr20 5197908 5198156 -61469849 - AluSx SINE Alu -11 301 47 305 278 93 96 chr20 5198156 5198319 -61469686 - HAL1b LINE L1 -1036 312 149 270 222 62 25 chr20 5198381 5198462 -61469543 - MLT1J LTR MaLR -35 476 393 706 119 336 0 chr20 5198994 5199137 -61468868 - AluSg/x SINE Alu -1 311 121 567 97 0 21 chr20 5199153 5199246 -61468759 - Alu SINE Alu 0 311 221 303 53 0 0 chr20 5199248 5199286 -61468719 - AluSq SINE Alu -132 171 134 2087 120 0 0 chr20 5199286 5199645 -61468360 - AluSg SINE Alu 0 310 1 2041 125 17 0 chr20 5199661 5199956 -61468049 - AluSx SINE Alu -12 300 1 737 208 100 50 chr20 5199986 5200227 -61467778 + MER63C DNA MER1_type 263 515 -415 378 143 48 0 chr20 5200220 5200283 -61467722 - AluJ/FRAM SINE Alu -8 294 229 * 855 161 0 0 chr20 5200283 5200420 -61467585 + AluSp/q SINE Alu 161 297 -16 620 215 29 67 chr20 5200420 5200483 -61467522 - MER63C DNA MER1_type -729 201 137 1227 164 97 53 chr20 5200483 5200686 -61467319 + AluJb SINE Alu 1 223 -89 2106 81 3 55 chr20 5200686 5200994 -61467011 + AluSp SINE Alu 1 292 -21 1227 164 97 53 chr20 5200994 5201089 -61466916 + AluJb SINE Alu 223 312 0 620 215 29 67 chr20 5201089 5201234 -61466771 - MER63C DNA MER1_type -793 137 1 264 30 0 0 chr20 5201302 5201335 -61466670 + (TG)n Simple_repeat Simple_repeat 2 34 0 776 204 0 0 chr20 5201335 5201472 -61466533 - AluJb SINE Alu -12 300 164 1637 96 5 0 chr20 5201472 5201692 -61466313 - AluSg/x SINE Alu -26 286 66 419 208 127 58 chr20 5201728 5201901 -61466104 + L2 LINE L2 2533 2717 -597 863 171 7 0 chr20 5201904 5202050 -61465955 + FRAM SINE Alu 1 146 -30 3368 102 22 0 chr20 5202056 5202517 -61465488 + MER11B LTR ERVK 1 471 -765 1098 123 6 28 chr20 5202573 5202752 -61465253 + MLT1B LTR MaLR 1 175 -215 1331 164 0 17 chr20 5202757 5202989 -61465016 + AluJo SINE Alu 1 228 -84 2060 122 30 0 chr20 5203001 5203305 -61464700 + AluSq SINE Alu 1 313 0 1431 121 22 9 chr20 5203305 5203518 -61464487 + MLT1B LTR MaLR 172 390 0 249 178 0 0 chr20 5203522 5203567 -61464438 + L2 LINE L2 2744 2788 -526 1013 90 0 0 chr20 5204210 5204343 -61463662 + AluSq/x SINE Alu 1 133 -180 1386 145 37 0 chr20 5204348 5204562 -61463443 + AluSg/x SINE Alu 81 302 -8 1820 234 38 20 chr20 5204564 5204607 -61463398 + LTR16A1 LTR ERVL 1 42 -415 1951 133 24 87 chr20 5204607 5204926 -61463079 - MLT1B LTR MaLR 0 390 101 2341 80 0 0 chr20 5204926 5205237 -61462768 + AluY SINE Alu 1 311 0 1951 133 24 87 chr20 5205237 5205330 -61462675 - MLT1B LTR MaLR -289 101 4 1820 234 38 20 chr20 5205330 5205735 -61462270 + LTR16A1 LTR ERVL 42 457 0 381 179 0 0 chr20 5205735 5205802 -61462203 - AluJ/FRAM SINE Alu -3 299 233 372 306 10 97 chr20 5205802 5205882 -61462123 + L3 LINE CR1 664 749 -828 764 134 118 0 chr20 5205882 5206001 -61462004 + FLAM_C SINE Alu 1 133 0 372 306 10 97 chr20 5206001 5206116 -61461889 + L3 LINE CR1 749 842 -735 2014 103 21 4 chr20 5206121 5206424 -61461581 - AluSq SINE Alu 0 308 1 1980 134 7 0 chr20 5206525 5206816 -61461189 - AluSx SINE Alu -18 294 2 1005 162 0 57 chr20 5207252 5207480 -61460525 + AluJo SINE Alu 1 215 -97 330 210 12 0 chr20 5207608 5207689 -61460316 - MLT1I LTR MaLR -4 405 324 617 165 9 0 chr20 5207695 5207804 -61460201 - AluJb SINE Alu -1 311 202 1304 173 54 30 chr20 5208152 5208306 -61459699 - AluJo SINE Alu -10 302 153 2090 107 26 13 chr20 5208306 5208614 -61459391 - AluSx SINE Alu 0 312 1 1304 173 54 30 chr20 5208614 5208754 -61459251 - AluJo SINE Alu -159 153 1 615 270 86 51 chr20 5208816 5208875 -61459130 - L1ME3A LINE L1 -220 5950 5895 2101 135 0 0 chr20 5208875 5209179 -61458826 - AluSx SINE Alu -8 304 1 615 270 86 51 chr20 5209179 5209585 -61458420 - L1ME3A LINE L1 -275 5895 5447 542 200 11 0 chr20 5209790 5209885 -61458120 - MER117 DNA MER1_type -42 155 60 533 213 11 0 chr20 5209895 5209989 -61458016 + MER5A DNA MER1_type 9 103 -86 491 338 18 31 chr20 5210101 5210329 -61457676 + L3 LINE CR1 594 818 -759 2220 95 3 7 chr20 5210481 5210785 -61457220 + AluSq SINE Alu 1 303 -10 884 132 0 22 chr20 5210796 5210932 -61457073 + FLAM_C SINE Alu 1 133 0 1695 157 0 24 chr20 5211016 5211303 -61456702 + AluJb SINE Alu 1 280 -32 203 0 37 0 chr20 5211303 5211330 -61456675 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 285 251 164 47 chr20 5211446 5211617 -61456388 + L3 LINE CR1 967 1157 -420 2139 119 0 3 chr20 5211820 5212131 -61455874 - AluSx SINE Alu -2 310 1 278 367 0 0 chr20 5212138 5212236 -61455769 + L3 LINE CR1 1254 1351 -226 432 282 60 45 chr20 5212282 5212526 -61455479 + L1M4 LINE L1 2783 3022 -3124 2118 119 0 3 chr20 5212526 5212829 -61455176 + AluSx SINE Alu 1 302 -10 2243 82 3 0 chr20 5212837 5213131 -61454874 + AluSp SINE Alu 1 295 -18 432 282 60 45 chr20 5213131 5213426 -61454579 + L1M4 LINE L1 3028 3339 -2807 853 149 0 8 chr20 5213431 5213565 -61454440 + FLAM_C SINE Alu 1 133 -10 241 188 0 0 chr20 5213582 5213630 -61454375 + L1M LINE L1 5346 5393 -787 212 264 58 97 chr20 5213631 5213680 -61454325 + L3 LINE CR1 1338 1387 -190 811 147 16 8 chr20 5213680 5213809 -61454196 + FLAM_C SINE Alu 2 131 -2 212 264 58 97 chr20 5213809 5213914 -61454091 + L3 LINE CR1 1387 1486 -91 2153 83 17 20 chr20 5214932 5215232 -61452773 + AluSx SINE Alu 3 301 -11 655 305 121 23 chr20 5215512 5215860 -61452145 - LTR16C LTR ERVL -1 490 109 450 0 0 0 chr20 5215953 5216003 -61452002 + (TA)n Simple_repeat Simple_repeat 2 51 0 2015 107 11 0 chr20 5216003 5216283 -61451722 - AluSg SINE Alu -27 283 1 1704 158 10 30 chr20 5216305 5216608 -61451397 - AluJb SINE Alu -15 297 1 534 193 39 180 chr20 5216681 5216870 -61451135 - MLT1J LTR MaLR -243 268 138 2043 138 29 35 chr20 5216870 5217246 -61450759 - THE1C LTR MaLR -1 374 1 534 193 39 180 chr20 5217246 5217367 -61450638 - MLT1J LTR MaLR -373 138 2 274 133 0 33 chr20 5218184 5218244 -61449761 + (TTCCC)n Simple_repeat Simple_repeat 1 58 0 1991 137 7 0 chr20 5218244 5218551 -61449454 - AluSx SINE Alu -2 310 2 728 264 127 75 chr20 5218555 5219020 -61448985 + MLT1H1 LTR MaLR 65 553 -2 720 209 16 0 chr20 5219312 5219441 -61448564 - AluJb SINE Alu -13 299 169 2259 80 7 0 chr20 5219885 5220187 -61447818 + AluSq SINE Alu 1 304 -9 1973 112 10 36 chr20 5220289 5220593 -61447412 - AluSx SINE Alu -16 296 1 1579 171 3 30 chr20 5220593 5220898 -61447107 - AluJo SINE Alu -15 297 1 2319 87 0 0 chr20 5221109 5221418 -61446587 + AluSx SINE Alu 1 309 -3 511 263 119 34 chr20 5221482 5221718 -61446287 - LTR16C LTR ERVL -3 488 233 480 188 10 20 chr20 5222261 5222362 -61445643 + MER34C LTR ERV1 37 136 -449 2368 144 37 0 chr20 5222384 5222767 -61445238 - MSTB LTR MaLR -29 397 1 758 225 81 101 chr20 5222767 5223198 -61444807 + MER34 LTR ERV1 100 521 -21 810 165 8 0 chr20 5223199 5223332 -61444673 + AluJo SINE Alu 1 134 -178 754 176 7 29 chr20 5223369 5223505 -61444500 - FLAM_C SINE Alu 0 133 1 2322 84 3 0 chr20 5223609 5223907 -61444098 - AluSp SINE Alu -14 299 1 2079 115 0 10 chr20 5223984 5224298 -61443707 + AluSx SINE Alu 1 311 -1 1585 144 8 19 chr20 5224400 5224664 -61443341 + AluJb SINE Alu 35 295 -17 2103 104 10 3 chr20 5224801 5225110 -61442895 + AluSx SINE Alu 1 311 -1 2279 102 0 0 chr20 5225216 5225520 -61442485 - AluSx SINE Alu -8 304 1 1881 137 0 7 chr20 5225566 5225875 -61442130 + AluJo SINE Alu 1 307 0 337 276 35 0 chr20 5225877 5225964 -61442041 - L2 LINE L2 -14 3299 3210 921 100 46 0 chr20 5225965 5226095 -61441910 + AluSq/x SINE Alu 1 136 -176 1885 144 3 0 chr20 5226096 5226387 -61441618 + AluSx SINE Alu 3 294 -18 279 311 61 30 chr20 5226387 5226519 -61441486 - L2 LINE L2 -94 3219 3084 999 169 0 45 chr20 5226693 5226871 -61441134 + MER45A DNA AcHobo 8 177 -1 641 248 64 5 chr20 5227015 5227311 -61440694 - MLT1I LTR MaLR 0 409 52 892 146 0 14 chr20 5227341 5227485 -61440520 - AluJb SINE Alu -23 289 148 433 244 87 74 chr20 5227511 5227697 -61440308 - L1M4 LINE L1 -1219 4927 4745 761 177 8 0 chr20 5227697 5227827 -61440178 - FLAM_A SINE Alu 0 133 3 433 244 87 74 chr20 5227827 5228030 -61439975 - L1M4 LINE L1 -1401 4745 4533 845 162 101 0 chr20 5228034 5228182 -61439823 - FRAM SINE Alu -3 163 1 1105 167 0 0 chr20 5228291 5228477 -61439528 - AluJb SINE Alu -6 306 121 337 327 137 24 chr20 5228599 5228767 -61439238 - L1M4 LINE L1 -1717 4429 4243 1653 138 98 0 chr20 5229106 5229382 -61438623 - AluSx SINE Alu -9 303 1 549 262 283 0 chr20 5229437 5229681 -61438324 + MER5C DNA MER1_type 11 323 -1 1950 105 38 42 chr20 5230404 5230717 -61437288 - AluSx SINE Alu 0 312 1 1138 165 0 0 chr20 5230775 5230963 -61437042 - AluJb SINE Alu -4 308 121 1993 128 0 7 chr20 5230988 5231286 -61436719 - AluSx SINE Alu -16 296 1 2281 94 0 0 chr20 5231462 5231770 -61436235 - AluSq SINE Alu -5 308 1 198 0 0 0 chr20 5231828 5231850 -61436155 + (T)n Simple_repeat Simple_repeat 1 22 0 446 115 52 62 chr20 5231850 5231946 -61436059 - LTR9 LTR ERV1 -86 526 432 356 186 0 35 chr20 5231972 5232058 -61435947 - L1M4 LINE L1 -2196 3950 3868 343 338 40 59 chr20 5232113 5232391 -61435614 - L1M4 LINE L1 -2368 3778 3496 2397 133 2 84 chr20 5232391 5232769 -61435236 - L1PA15 LINE L1 -2 6163 5756 2267 89 0 0 chr20 5232769 5233061 -61434944 - AluSg SINE Alu -15 295 4 2397 133 2 84 chr20 5233061 5233074 -61434931 - L1PA15 LINE L1 -409 5756 5810 2192 103 3 0 chr20 5233074 5233376 -61434629 - AluSx SINE Alu -9 303 1 2397 133 2 84 chr20 5233376 5233434 -61434571 - L1PA15 LINE L1 -354 5811 5750 343 338 40 59 chr20 5233434 5233569 -61434436 - L1M4 LINE L1 -2650 3496 3376 2175 117 10 0 chr20 5233819 5234128 -61433877 - AluSx SINE Alu 0 312 1 966 91 15 15 chr20 5234656 5234788 -61433217 + FLAM_C SINE Alu 2 133 0 2240 96 0 3 chr20 5234798 5235110 -61432895 + AluSx SINE Alu 1 311 -1 1027 190 0 0 chr20 5235235 5235409 -61432596 - AluJb SINE Alu -5 307 134 1703 179 3 0 chr20 5235409 5235716 -61432289 - AluJo SINE Alu -4 308 1 442 158 118 0 chr20 5236044 5236120 -61431885 - AluSg/x SINE Alu -19 290 206 198 0 0 0 chr20 5236239 5236261 -61431744 + (T)n Simple_repeat Simple_repeat 1 22 0 1214 131 0 0 chr20 5236360 5236535 -61431470 - AluSx SINE Alu -137 175 1 2293 93 0 0 chr20 5236569 5236871 -61431134 + AluSx SINE Alu 1 302 -10 405 133 0 17 chr20 5237035 5237095 -61430910 - AluJ/FLAM SINE Alu -249 63 5 1338 156 31 35 chr20 5237099 5237356 -61430649 - AluJo SINE Alu -56 256 1 258 178 0 0 chr20 5237475 5237520 -61430485 - L2 LINE L2 -605 2709 2665 2075 121 0 3 chr20 5237635 5237941 -61430064 + AluY SINE Alu 1 305 -6 1960 152 0 3 chr20 5237960 5238269 -61429736 + AluSx SINE Alu 1 308 -4 1700 96 69 4 chr20 5238296 5238578 -61429427 + AluSx SINE Alu 7 305 0 934 218 131 33 chr20 5238580 5239007 -61428998 + HAL1 LINE L1 1103 1571 -936 1059 281 67 17 chr20 5239077 5239553 -61428452 + HAL1 LINE L1 1958 2457 -50 1043 159 11 0 chr20 5239553 5239729 -61428276 - AluJo SINE Alu -22 290 113 2009 112 35 0 chr20 5239766 5240053 -61427952 - AluSp SINE Alu -16 297 1 479 177 0 13 chr20 5240073 5240152 -61427853 + MER2 DNA MER2_type 268 345 0 2380 161 53 95 chr20 5240926 5240978 -61427027 + L1 LINE L1 3827 3880 -2266 2263 74 10 0 chr20 5240978 5241275 -61426730 + AluSp SINE Alu 1 300 -13 2380 161 53 95 chr20 5241275 5241786 -61426219 + L1 LINE L1 3880 4411 -1735 1716 153 37 0 chr20 5241786 5242080 -61425925 - AluJb SINE Alu -4 308 4 1897 130 3 7 chr20 5242081 5242380 -61425625 - AluSx SINE Alu -14 298 1 2380 161 53 95 chr20 5242380 5242457 -61425548 + L1 LINE L1 4410 4443 -1703 2191 97 0 16 chr20 5242489 5242799 -61425206 - AluSg SINE Alu -5 305 1 1214 184 68 43 chr20 5242799 5242969 -61425036 - AluJo SINE Alu -15 287 106 2196 96 7 0 chr20 5242969 5243271 -61424734 + AluSg SINE Alu 1 304 -6 1214 184 68 43 chr20 5243271 5243378 -61424627 - AluJo SINE Alu -196 106 3 393 289 147 19 chr20 5244226 5244382 -61423623 - MER5A DNA MER1_type 0 189 14 439 200 78 17 chr20 5244813 5244928 -61423077 - MIR SINE MIR -24 238 117 187 237 303 0 chr20 5245370 5245446 -61422559 - L2 LINE L2 -5 3267 3169 334 280 49 21 chr20 5245814 5245957 -61422048 + L3 LINE CR1 1112 1258 -319 1947 97 100 0 chr20 5246173 5246452 -61421553 - AluSx SINE Alu -5 307 1 2313 92 13 0 chr20 5246512 5246817 -61421188 - AluSp SINE Alu -4 309 1 636 124 0 0 chr20 5246929 5247018 -61420987 - 5S rRNA rRNA -31 90 2 201 345 26 9 chr20 5247018 5247131 -61420874 + L3 LINE CR1 1284 1398 -179 832 218 0 0 chr20 5247587 5247804 -61420201 + FRAM SINE Alu 1 81 0 732 237 167 31 chr20 5248002 5248289 -61419716 + L2 LINE L2 2135 2460 -854 23 33 0 0 chr20 5248929 5248959 -61419046 + AT_rich Low_complexity Low_complexity 1 30 0 230 210 24 99 chr20 5249798 5249931 -61418074 - L1M3 LINE L1 -367 5813 5689 1805 176 3 25 chr20 5249951 5250270 -61417735 - AluJo SINE Alu 0 312 1 2427 181 25 23 chr20 5250804 5250951 -61417054 + L1MA3 LINE L1 3423 3568 -2578 1857 171 7 0 chr20 5250951 5251255 -61416750 + AluJb SINE Alu 1 306 -6 2427 181 25 23 chr20 5251255 5251625 -61416380 + L1MA3 LINE L1 3568 3941 -2205 1308 127 97 158 chr20 5251626 5251726 -61416279 + AluJb SINE Alu 3 107 -205 1531 184 0 8 chr20 5251726 5251976 -61416029 + AluJo SINE Alu 5 252 -60 1308 127 97 158 chr20 5251976 5252205 -61415800 + AluJb SINE Alu 107 312 0 5884 104 73 64 chr20 5252209 5252784 -61415221 + L1MA3 LINE L1 4873 5441 -864 882 93 0 0 chr20 5252784 5252902 -61415103 - FLAM_C SINE Alu -15 118 1 5884 104 73 64 chr20 5252902 5253545 -61414460 + L1MA3 LINE L1 5441 6076 -229 1864 153 0 3 chr20 5253545 5253833 -61414172 + AluSx SINE Alu 1 287 -25 5884 104 73 64 chr20 5253833 5253889 -61414116 + L1MA3 LINE L1 6076 6130 -175 1453 124 200 0 chr20 5253889 5254139 -61413866 + AluSg SINE Alu 1 300 0 5884 104 73 64 chr20 5254139 5254292 -61413713 + L1MA3 LINE L1 6130 6305 0 1577 133 53 93 chr20 5254299 5254601 -61413404 + AluJb SINE Alu 1 290 -22 414 39 0 0 chr20 5254617 5254669 -61413336 + (CA)n Simple_repeat Simple_repeat 2 53 0 2314 99 0 10 chr20 5254937 5255249 -61412756 - AluSq SINE Alu -4 309 1 1967 149 0 7 chr20 5255261 5255550 -61412455 - AluJo SINE Alu -25 287 1 1846 137 4 0 chr20 5255576 5255846 -61412159 + AluJb SINE Alu 15 285 -27 1209 195 0 0 chr20 5256177 5256372 -61411633 + AluJb SINE Alu 104 298 -14 1948 137 3 7 chr20 5256372 5256678 -61411327 + AluSx SINE Alu 1 305 0 2336 103 3 0 chr20 5256680 5256990 -61411015 + AluSp SINE Alu 1 311 -2 187 303 30 40 chr20 5258312 5258411 -61409594 - MIR3 SINE MIR -105 103 6 1378 152 0 25 chr20 5258584 5258828 -61409177 - AluSg/x SINE Alu 0 312 75 1995 131 28 0 chr20 5258830 5259121 -61408884 - AluSx SINE Alu -13 299 1 2182 133 0 0 chr20 5259442 5259742 -61408263 + AluSx SINE Alu 1 300 -12 2330 113 0 0 chr20 5259871 5260181 -61407824 + AluSg SINE Alu 1 310 0 2268 97 3 6 chr20 5260380 5260691 -61407314 - AluSg SINE Alu 0 310 1 418 254 56 0 chr20 5262246 5262372 -61405633 - L1ME1 LINE L1 -52 6114 5982 532 157 12 0 chr20 5262548 5262631 -61405374 - HY4 scRNA scRNA -9 84 1 2099 111 21 17 chr20 5262636 5262924 -61405081 - AluSx SINE Alu -22 290 2 1269 195 99 64 chr20 5264211 5264698 -61403307 + L1MC5 LINE L1 6971 7474 -487 1060 166 11 6 chr20 5264731 5264906 -61403099 + FRAM SINE Alu 1 176 0 232 252 81 41 chr20 5265052 5265175 -61402830 - MIR SINE MIR -3 259 132 1403 143 0 0 chr20 5265202 5265405 -61402600 - AluSg/x SINE Alu -14 296 94 212 297 27 36 chr20 5265518 5265629 -61402376 + MIR SINE MIR 84 193 -69 1099 184 20 33 chr20 5266848 5267093 -61400912 + AluJo SINE Alu 55 296 -16 449 134 24 0 chr20 5267716 5267798 -61400207 + FLAM_A SINE Alu 44 127 -15 2160 84 0 53 chr20 5269347 5269670 -61398335 - AluSx SINE Alu 0 307 1 275 297 66 0 chr20 5269835 5269926 -61398079 - L1MEd LINE L1 -4895 1224 1128 207 100 0 0 chr20 5269926 5269956 -61398049 + (T)n Simple_repeat Simple_repeat 1 30 0 1270 162 160 46 chr20 5270107 5270172 -61397833 - HsTC2 DNA Tc2 -15 1883 1827 1586 187 17 7 chr20 5270172 5270472 -61397533 - AluJo SINE Alu -9 303 1 1270 162 160 46 chr20 5270472 5270517 -61397488 - HsTC2 DNA Tc2 -71 1827 1789 2407 110 0 0 chr20 5270517 5270827 -61397178 - AluSx SINE Alu 0 312 3 1270 162 160 46 chr20 5270827 5271109 -61396896 - HsTC2 DNA Tc2 -109 1789 1269 1194 234 45 6 chr20 5271106 5271418 -61396587 - HsTC2 DNA Tc2 -1385 513 190 * 330 273 186 51 chr20 5271543 5271777 -61396228 - L2 LINE L2 -255 3058 2793 2347 96 0 0 chr20 5271964 5272257 -61395748 + AluSx SINE Alu 5 297 -15 328 236 64 9 chr20 5272451 5272561 -61395444 - MLT1K LTR MaLR 0 588 473 724 296 58 10 chr20 5272585 5272876 -61395129 + L1ME LINE L1 5378 5682 -439 2211 96 30 3 chr20 5272901 5273204 -61394801 + AluSq SINE Alu 1 311 -2 1064 182 0 6 chr20 5273607 5273783 -61394222 + AluJo SINE Alu 4 178 -134 952 123 0 0 chr20 5273888 5274018 -61393987 + FLAM_C SINE Alu 2 131 -2 35 63 0 0 chr20 5274018 5274081 -61393924 + AT_rich Low_complexity Low_complexity 1 63 0 272 267 40 10 chr20 5274253 5274354 -61393651 + MIR SINE MIR 2 105 -157 1822 68 124 8 chr20 5274499 5274748 -61393257 + AluSg SINE Alu 1 278 -32 267 31 0 0 chr20 5274751 5274783 -61393222 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 241 277 0 48 chr20 5274835 5274918 -61393087 + MIR SINE MIR 176 254 -8 203 240 20 0 chr20 5275250 5275300 -61392705 + (CCCCG)n Simple_repeat Simple_repeat 4 54 0 27 29 0 0 chr20 5275520 5275554 -61392451 + GC_rich Low_complexity Low_complexity 1 34 0 357 287 74 8 chr20 5276646 5276768 -61391237 + Charlie8 DNA MER1_type 93 222 -2195 558 141 0 0 chr20 5277046 5277131 -61390874 + FLAM_A SINE Alu 1 85 -57 2197 107 0 26 chr20 5277822 5277991 -61390014 - AluSg SINE Alu -10 300 141 2144 121 7 0 chr20 5277991 5278288 -61389717 - AluSp SINE Alu -13 300 2 2197 107 0 26 chr20 5278288 5278426 -61389579 - AluSg SINE Alu -169 141 1 2284 91 0 7 chr20 5278504 5278822 -61389183 - AluSq SINE Alu 0 316 1 2266 75 3 36 chr20 5279042 5279349 -61388656 + AluSp SINE Alu 1 297 -16 2573 53 0 7 chr20 5279357 5279659 -61388346 + AluY SINE Alu 1 300 -11 387 319 65 23 chr20 5280236 5280452 -61387553 + MIR SINE MIR 11 235 -27 2171 129 0 0 chr20 5280650 5280945 -61387060 - AluSx SINE Alu -17 295 1 2079 71 27 37 chr20 5281438 5281734 -61386271 + AluY SINE Alu 1 293 -18 979 180 0 6 chr20 5281804 5281965 -61386040 - AluJo SINE Alu -17 295 136 223 333 0 0 chr20 5281973 5282051 -61385954 - MIR SINE MIR -64 144 67 2228 95 10 3 chr20 5282077 5282372 -61385633 - AluSp SINE Alu -16 297 1 2375 112 0 0 chr20 5283056 5283368 -61384637 - AluSq SINE Alu -1 312 1 22 0 0 0 chr20 5283631 5283653 -61384352 + AT_rich Low_complexity Low_complexity 1 22 0 636 130 104 9 chr20 5283659 5283774 -61384231 - AluJo SINE Alu -185 127 2 1914 169 32 9 chr20 5285333 5285676 -61382329 - L1PA15 LINE L1 -4 6161 5811 2217 112 3 0 chr20 5285796 5286090 -61381915 - AluSx SINE Alu -17 295 1 829 83 83 38 chr20 5286187 5286320 -61381685 + AluJo SINE Alu 112 250 -62 2384 86 3 0 chr20 5286343 5286644 -61381361 - AluY SINE Alu -9 302 1 848 153 15 0 chr20 5286666 5286797 -61381208 - FLAM_C SINE Alu 0 133 1 1254 135 13 26 chr20 5286797 5287015 -61380990 - L1 LINE L1 -1149 4997 4781 1966 136 0 0 chr20 5287036 5287309 -61380696 - AluSq SINE Alu -16 297 25 612 95 0 0 chr20 5287311 5287395 -61380610 + AluSg/x SINE Alu 176 259 -53 237 154 0 0 chr20 5287395 5287434 -61380571 + L1 LINE L1 4547 4585 -1561 1069 138 0 0 chr20 5287448 5287607 -61380398 + L1 LINE L1 4639 4797 -1349 1824 142 0 65 chr20 5287607 5287931 -61380074 + AluSx SINE Alu 1 303 -9 2673 150 20 16 chr20 5287931 5288347 -61379658 - L1 LINE L1 -1817 4329 3909 2215 103 0 10 chr20 5288347 5288649 -61379356 - AluSx SINE Alu -13 299 1 2673 150 20 16 chr20 5288649 5288720 -61379285 - L1 LINE L1 -2237 3909 3840 311 244 68 27 chr20 5288699 5288920 -61379085 - L1ME LINE L1 -295 5826 5555 * 260 213 33 0 chr20 5289080 5289141 -61378864 + MIR SINE MIR 114 176 -86 792 220 157 33 chr20 5289144 5289444 -61378561 + L1MC5 LINE L1 7044 7380 -581 2630 175 62 161 chr20 5289504 5290477 -61377528 + MER21A LTR ERV1 39 914 -17 604 162 8 43 chr20 5290588 5290705 -61377300 + FLAM_C SINE Alu 13 125 -18 2162 130 0 0 chr20 5290712 5291004 -61377001 + AluSx SINE Alu 1 292 -20 264 218 122 20 chr20 5291007 5291154 -61376851 + L1MC5 LINE L1 7520 7681 -280 1750 239 72 18 chr20 5291175 5291400 -61376605 + L1ME LINE L1 5103 5314 -856 1766 155 41 3 chr20 5291400 5291691 -61376314 - AluJo SINE Alu -10 302 1 1750 239 72 18 chr20 5291691 5292087 -61375918 + L1ME LINE L1 5314 5746 -424 530 87 0 0 chr20 5292085 5292154 -61375851 - L1M3 LINE L1 -463 5720 5652 * 415 129 0 0 chr20 5292165 5292235 -61375770 - Alu SINE Alu -1 311 242 787 56 25 168 chr20 5292235 5292300 -61375705 - L1M3 LINE L1 -469 5714 5684 2081 149 0 0 chr20 5292300 5292608 -61375397 - AluSx SINE Alu 0 312 5 787 56 25 168 chr20 5292608 5292703 -61375302 - L1M3 LINE L1 -499 5684 5577 323 130 234 13 chr20 5292715 5292792 -61375213 + Charlie1 DNA MER1_type 2620 2713 -48 269 189 38 0 chr20 5292891 5292944 -61375061 - MER94 DNA DNA -79 55 1 1886 181 3 0 chr20 5294362 5294666 -61373339 - AluJb SINE Alu -3 309 5 1784 244 98 7 chr20 5295292 5295739 -61372266 - MLT1J LTR MaLR -18 493 6 692 177 46 0 chr20 5296120 5296250 -61371755 - FLAM_C SINE Alu -6 137 2 556 191 157 0 chr20 5296275 5296390 -61371615 - FLAM_A SINE Alu 0 133 1 588 119 0 40 chr20 5296490 5296591 -61371414 - AluSg/x SINE Alu 0 312 216 205 219 109 47 chr20 5296766 5296830 -61371175 - MIR SINE MIR -99 109 42 782 112 0 40 chr20 5297542 5297667 -61370338 - AluJb SINE Alu -1 311 192 236 299 89 0 chr20 5297756 5297913 -61370092 - L1ME LINE L1 -671 5450 5280 887 143 0 0 chr20 5298123 5298249 -61369756 - FLAM_C SINE Alu -7 126 1 2078 113 7 0 chr20 5298260 5298562 -61369443 - AluSq SINE Alu -9 304 1 266 204 57 23 chr20 5298562 5298650 -61369355 - L1 LINE L1 -1102 5044 4954 204 286 32 16 chr20 5298898 5298961 -61369044 - MIR3 SINE MIR -142 66 3 751 189 8 0 chr20 5300030 5300157 -61367848 + FLAM_A SINE Alu 4 131 -2 734 172 8 0 chr20 5300162 5300284 -61367721 - FLAM_C SINE Alu -19 124 2 2334 96 3 0 chr20 5300299 5300611 -61367394 - AluSp SINE Alu 0 313 1 186 71 0 0 chr20 5300628 5300656 -61367349 + (A)n Simple_repeat Simple_repeat 1 28 0 2123 99 0 3 chr20 5301007 5301290 -61366715 + AluSx SINE Alu 1 282 -30 412 261 43 43 chr20 5301641 5301802 -61366203 + MER112 DNA MER1_type 17 177 -83 583 245 109 11 chr20 5301809 5301993 -61366012 - L1ME3A LINE L1 -6 6164 5963 392 191 95 0 chr20 5302000 5302084 -61365921 + MER112 DNA MER1_type 161 252 -8 207 295 66 0 chr20 5302123 5302184 -61365821 - MIR SINE MIR -67 141 77 371 229 194 14 chr20 5302952 5303096 -61364909 - L2 LINE L2 -36 3277 3108 207 0 0 0 chr20 5303187 5303210 -61364795 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1787 159 0 0 chr20 5303212 5303495 -61364510 - AluJb SINE Alu -29 283 1 756 178 59 87 chr20 5304099 5304352 -61363653 - MLT1D LTR MaLR -256 249 4 190 341 71 29 chr20 5304575 5304745 -61363260 - L2 LINE L2 -578 2736 2560 845 289 135 27 chr20 5305153 5305554 -61362451 - MLT1K LTR MaLR -19 569 126 1979 193 23 3 chr20 5306059 5306412 -61361593 - MLT1A1 LTR MaLR 0 365 6 1131 70 41 35 chr20 5306531 5306703 -61361302 - MER30 DNA MER1_type -57 173 1 2010 122 0 22 chr20 5306712 5307023 -61360982 - AluSq SINE Alu -9 304 1 1259 63 11 37 chr20 5307717 5307906 -61360099 - L1PA3 LINE L1 0 6155 5972 953 143 35 64 chr20 5309030 5309079 -61358926 - MER3 DNA MER1_type 0 209 160 4349 126 22 27 chr20 5309079 5309820 -61358185 - L1MB3 LINE L1 -1 6182 5446 953 143 35 64 chr20 5309820 5309973 -61358032 - MER3 DNA MER1_type -49 160 13 209 217 0 22 chr20 5310444 5310490 -61357515 - L3 LINE CR1 -568 1009 965 233 286 16 0 chr20 5310550 5310613 -61357392 - MLT1K LTR MaLR -345 243 180 1504 281 59 23 chr20 5310700 5310729 -61357276 - L2 LINE L2 -823 2491 2465 1370 146 35 9 chr20 5310729 5310955 -61357050 + MER46A DNA MER2_type 3 234 -2 1504 281 59 23 chr20 5310955 5311497 -61356508 - L2 LINE L2 -849 2465 1899 661 184 0 0 chr20 5311610 5311719 -61356286 + FLAM_C SINE Alu 2 110 -33 400 166 23 168 chr20 5311719 5311803 -61356202 - L1MC5 LINE L1 -825 6983 7010 2162 102 3 0 chr20 5311803 5312108 -61355897 - AluSp SINE Alu -7 306 1 400 166 23 168 chr20 5312108 5312233 -61355772 - L1MC5 LINE L1 -797 7011 6870 2099 124 3 0 chr20 5312327 5312633 -61355372 - AluSx SINE Alu -1 311 5 236 233 139 0 chr20 5313984 5314070 -61353935 - L2 LINE L2 -35 3237 3140 841 208 0 0 chr20 5314091 5314250 -61353755 - AluJb SINE Alu -7 305 147 1157 329 172 18 chr20 5314400 5315608 -61352397 - L2 LINE L2 -357 2957 1564 207 100 0 0 chr20 5316081 5316111 -61351894 + (TA)n Simple_repeat Simple_repeat 2 31 0 2239 108 0 9 chr20 5316680 5316995 -61351010 + AluSx SINE Alu 1 312 0 277 176 206 0 chr20 5318033 5318101 -61349904 - L2 LINE L2 -2 3270 3189 1734 37 0 0 chr20 5319322 5319538 -61348467 + L1P LINE L1 3202 3417 -2729 224 311 90 57 chr20 5320299 5320421 -61347584 - MIR SINE MIR -116 146 21 241 262 55 67 chr20 5320924 5321088 -61346917 + L1M LINE L1 5259 5420 -744 569 204 309 0 chr20 5322834 5322996 -61345009 + MIR SINE MIR 13 224 -38 2079 67 57 3 chr20 5323002 5323284 -61344721 + AluY SINE Alu 1 297 -14 2076 77 0 0 chr20 5324073 5324357 -61343648 + AluSg SINE Alu 21 304 0 1355 139 132 26 chr20 5324684 5324950 -61343055 + AluJb SINE Alu 1 294 -18 1904 137 3 3 chr20 5327669 5327969 -61340036 - AluSx SINE Alu -12 300 1 246 221 177 44 chr20 5328222 5328335 -61339670 + MIR SINE MIR 81 208 -54 336 209 136 27 chr20 5328506 5328616 -61339389 + MARNA DNA Mariner 296 417 -169 3262 94 24 2 chr20 5328864 5329320 -61338685 - MER41A LTR ERV1 -88 466 1 3720 91 55 2 chr20 5329320 5329860 -61338145 - MER41A-int LTR ERV1 -2 6093 5394 669 81 23 0 chr20 5329842 5329928 -61338077 - MER41B-int LTR ERV1 -5858 88 1 * 952 150 0 0 chr20 5329928 5330081 -61337924 - MER41B LTR ERV1 0 635 483 1013 161 16 27 chr20 5330082 5330155 -61337850 - MER58A DNA MER1_type -2203 217 145 1621 152 35 90 chr20 5330155 5330523 -61337482 - MER7A DNA MER2_type 0 346 1 1013 161 16 27 chr20 5330523 5330635 -61337370 - MER58A DNA MER1_type -2275 145 34 827 217 33 5 chr20 5331763 5331947 -61336058 - MER5A DNA MER1_type 0 189 1 326 265 74 48 chr20 5331953 5332380 -61335625 + L1M4 LINE L1 3313 3846 -2300 1823 107 26 23 chr20 5332424 5332732 -61335273 + AluSg SINE Alu 1 309 -1 250 297 0 31 chr20 5332959 5333087 -61334918 + HAL1 LINE L1 2301 2424 -83 196 313 78 16 chr20 5333181 5333245 -61334760 - L2 LINE L2 -1 3271 3204 1517 195 0 13 chr20 5333686 5333989 -61334016 + AluJo SINE Alu 1 299 -13 5044 170 81 53 chr20 5335583 5336146 -61331859 + Charlie1a DNA MER1_type 1 547 -2214 1912 107 36 32 chr20 5336146 5336455 -61331550 + AluSx SINE Alu 1 310 -2 5044 170 81 53 chr20 5336455 5336603 -61331402 + Charlie1a DNA MER1_type 547 689 -2072 234 0 0 0 chr20 5336603 5336629 -61331376 + (TG)n Simple_repeat Simple_repeat 2 27 0 5044 170 81 53 chr20 5336629 5337101 -61330904 + Charlie1a DNA MER1_type 689 1218 -237 2087 144 101 36 chr20 5337149 5337565 -61330440 - MSTB2 LTR MaLR 0 457 15 716 162 17 8 chr20 5337966 5338083 -61329922 + FLAM_C SINE Alu 1 118 -15 565 183 50 0 chr20 5343417 5343537 -61324468 - MIR SINE MIR -21 241 116 637 190 8 0 chr20 5343642 5343763 -61324242 + MIR SINE MIR 141 262 0 22 0 0 0 chr20 5345679 5345701 -61322304 + AT_rich Low_complexity Low_complexity 1 22 0 204 67 0 0 chr20 5345781 5345811 -61322194 + (T)n Simple_repeat Simple_repeat 1 30 0 204 348 140 6 chr20 5346931 5347109 -61320896 + L2 LINE L2 2493 2694 -620 7688 19 0 0 chr20 5347960 5349058 -61318947 - L1PA4 LINE L1 0 6155 5047 11876 27 4 0 chr20 5349058 5350439 -61317566 + L1PA4 LINE L1 3675 5060 -1086 2272 95 0 7 chr20 5350441 5350735 -61317270 - AluSx SINE Alu -12 300 9 1106 252 151 44 chr20 5350745 5351309 -61316696 - L2 LINE L2 -9 3304 2802 477 47 0 0 chr20 5351309 5351373 -61316632 + (CA)n Simple_repeat Simple_repeat 2 65 0 1106 252 151 44 chr20 5351373 5351760 -61316245 - L2 LINE L2 -511 2802 2174 758 209 22 44 chr20 5352507 5352689 -61315316 + MER5B DNA MER1_type 1 178 0 2341 94 0 3 chr20 5352915 5353214 -61314791 - AluSx SINE Alu -14 298 1 192 309 43 52 chr20 5353217 5353427 -61314578 - L3 LINE CR1 -257 1320 1113 907 162 81 0 chr20 5353710 5353950 -61314055 - L1MC4 LINE L1 0 8042 7683 236 302 105 0 chr20 5354186 5354272 -61313733 + MIR SINE MIR 56 150 -112 816 203 4 84 chr20 5354694 5354931 -61313074 + MIR SINE MIR 45 262 0 1906 160 24 0 chr20 5354991 5355284 -61312721 - AluSx SINE Alu -12 300 1 809 192 28 84 chr20 5355483 5355769 -61312236 + L1MC5 LINE L1 6810 7079 -882 747 181 0 0 chr20 5355812 5355928 -61312077 - FLAM_C SINE Alu -23 120 5 826 165 86 58 chr20 5355932 5356175 -61311830 + L1M4 LINE L1 4897 5146 -1000 282 363 25 0 chr20 5356894 5357051 -61310954 - MIR SINE MIR -11 251 91 3195 224 16 0 chr20 5357505 5358216 -61309789 + L1 LINE L1 3899 4620 -1526 1032 160 0 17 chr20 5358229 5358404 -61309601 - FRAM SINE Alu -7 169 1 2457 185 25 53 chr20 5358406 5358773 -61309232 + L1 LINE L1 4607 4983 -1163 2048 145 0 3 chr20 5358773 5359070 -61308935 - AluSx SINE Alu -16 296 1 2457 185 25 53 chr20 5359070 5359244 -61308761 + L1 LINE L1 4983 5134 -1012 2346 110 0 0 chr20 5359244 5359552 -61308453 + AluSx SINE Alu 1 308 -4 2457 185 25 53 chr20 5359552 5359577 -61308428 + L1 LINE L1 5134 5158 -988 418 282 18 0 chr20 5359607 5359717 -61308288 - LTR16C LTR ERVL -235 256 145 942 151 33 160 chr20 5359806 5360082 -61307923 + MER33 DNA MER1_type 1 215 -2370 1572 171 13 49 chr20 5360082 5360386 -61307619 - AluJb SINE Alu -19 293 1 942 151 33 160 chr20 5360386 5360476 -61307529 + MER33 DNA MER1_type 215 315 -9 1162 271 73 40 chr20 5361200 5361624 -61306381 - MLT1J LTR MaLR -73 438 1 1800 92 24 4 chr20 5361815 5362066 -61305939 + L1PA10 LINE L1 5908 6163 -5 402 21 0 0 chr20 5362085 5362132 -61305873 + (TG)n Simple_repeat Simple_repeat 1 47 0 419 265 84 63 chr20 5363790 5363992 -61304013 - L2 LINE L2 -648 2666 2457 2124 131 0 16 chr20 5363992 5364297 -61303708 + AluSx SINE Alu 1 300 -12 419 265 84 63 chr20 5364297 5364332 -61303673 - L2 LINE L2 -857 2457 2424 474 276 70 37 chr20 5364807 5364920 -61303085 - LTR16C LTR ERVL -26 465 357 1753 146 41 0 chr20 5364920 5365188 -61302817 + AluJo SINE Alu 1 279 -33 474 276 70 37 chr20 5365188 5365470 -61302535 - LTR16C LTR ERVL -134 357 1 2044 128 0 50 chr20 5365591 5365910 -61302095 - AluSx SINE Alu -9 303 1 456 62 0 0 chr20 5365926 5365990 -61302015 + (TA)n Simple_repeat Simple_repeat 2 65 0 2541 128 32 5 chr20 5366779 5367179 -61300826 - MSTB LTR MaLR -15 411 1 785 299 126 24 chr20 5367440 5368126 -61299879 + L2 LINE L2 2555 3308 -5 210 280 84 56 chr20 5368224 5368367 -61299638 + MIR3 SINE MIR 48 194 -14 1106 249 127 28 chr20 5368505 5368938 -61299067 + LTR16C LTR ERVL 1 476 -15 2997 107 9 12 chr20 5370117 5370546 -61297459 + MSTC LTR MaLR 1 428 0 2624 65 0 0 chr20 5370901 5371211 -61296794 - AluY SINE Alu -1 310 1 1386 229 91 21 chr20 5372308 5372728 -61295277 + LTR16A1 LTR ERVL 8 456 -1 2222 125 0 10 chr20 5372882 5373186 -61294819 - AluSx SINE Alu -10 302 2 2276 170 62 5 chr20 5373505 5373940 -61294065 + MLT1C LTR MaLR 6 465 -2 320 64 21 0 chr20 5374192 5374239 -61293766 + (TTTC)n Simple_repeat Simple_repeat 3 50 0 4073 42 16 8 chr20 5374265 5374766 -61293239 - L1PA6 LINE L1 -11 6143 5639 400 278 26 0 chr20 5375274 5375389 -61292616 - Charlie7 DNA MER1_type -1922 690 573 2437 78 0 0 chr20 5375618 5375914 -61292091 + AluY SINE Alu 1 296 -15 2112 128 0 0 chr20 5376502 5376799 -61291206 - AluJb SINE Alu -15 297 1 1935 243 96 98 chr20 5376885 5377516 -61290489 + Charlie7 DNA MER1_type 125 753 -1859 2216 140 0 0 chr20 5377516 5377824 -61290181 + AluSx SINE Alu 1 308 -4 1935 243 96 98 chr20 5377824 5378331 -61289674 + Charlie7 DNA MER1_type 753 1260 -1352 226 222 0 0 chr20 5378552 5378597 -61289408 + Charlie7 DNA MER1_type 1377 1421 -1191 587 106 24 0 chr20 5378598 5378683 -61289322 + MER21B LTR ERV1 329 415 -448 210 71 0 0 chr20 5378723 5378751 -61289254 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 569 212 152 24 chr20 5378789 5378954 -61289051 + Charlie7 DNA MER1_type 1503 1688 -924 321 238 42 49 chr20 5379411 5379554 -61288451 + L1MC5 LINE L1 7540 7681 -280 1189 182 153 10 chr20 5379560 5379845 -61288160 + MLT1A1 LTR MaLR 1 333 -32 791 195 7 7 chr20 5379845 5379999 -61288006 - FRAM SINE Alu -22 154 1 247 294 28 51 chr20 5380039 5380294 -61287711 + L1MC4 LINE L1 7794 8042 0 379 250 153 20 chr20 5380315 5380511 -61287494 + Charlie7 DNA MER1_type 1713 1934 -678 3537 197 43 7 chr20 5380512 5381329 -61286676 + L1MB2 LINE L1 4342 5187 -959 1210 196 141 4 chr20 5381332 5381587 -61286418 + AluJo SINE Alu 2 291 -11 369 185 80 8 chr20 5381590 5381701 -61286304 + Alu SINE Alu 234 297 -5 5030 145 32 23 chr20 5381711 5382319 -61285686 + L1MB2 LINE L1 5166 5791 -380 184 57 29 29 chr20 5382319 5382354 -61285651 + (TA)n Simple_repeat Simple_repeat 1 35 0 5030 145 32 23 chr20 5382354 5382738 -61285267 + L1MB2 LINE L1 5791 6170 -1 884 224 114 59 chr20 5382752 5383260 -61284745 + Charlie7 DNA MER1_type 1927 2462 -150 207 0 0 0 chr20 5383429 5383452 -61284553 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 1120 176 35 0 chr20 5383526 5383725 -61284280 + MER3 DNA MER1_type 2 207 -2 588 40 0 0 chr20 5384246 5384321 -61283684 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 32612 110 12 52 chr20 5384321 5390718 -61277287 - L1PA7 LINE L1 -12 6142 12 1701 95 32 4 chr20 5390960 5391212 -61276793 + L1MA2 LINE L1 6006 6264 -40 3784 66 10 0 chr20 5391212 5391693 -61276312 + L1PA6 LINE L1 5663 6153 -1 331 167 0 0 chr20 5392326 5392386 -61275619 + L1MA3 LINE L1 6246 6305 0 601 269 8 61 chr20 5393136 5393400 -61274605 + L1M4 LINE L1 4442 4691 -1455 243 276 0 0 chr20 5393460 5393518 -61274487 - L2 LINE L2 0 3313 3256 1097 155 5 15 chr20 5393563 5393763 -61274242 - L1PB2 LINE L1 -3 6864 6667 14944 162 24 10 chr20 5394023 5399641 -61268364 - L1PB2 LINE L1 -175 6692 998 360 111 0 0 chr20 5399641 5399695 -61268310 + (T)n Simple_repeat Simple_repeat 1 54 0 3530 222 21 12 chr20 5399724 5400588 -61267417 - L1M4c LINE L1 -3263 4302 3328 1931 149 3 34 chr20 5400588 5400910 -61267095 - AluSx SINE Alu 0 312 1 3530 222 21 12 chr20 5400910 5401337 -61266668 - L1M4c LINE L1 -4237 3328 2906 1509 195 22 11 chr20 5401337 5401614 -61266391 - AluJo SINE Alu -2 310 31 605 350 5 9 chr20 5401614 5401828 -61266177 - L1M4c LINE L1 -5742 1744 1532 * 963 186 9 27 chr20 5401816 5402036 -61265969 - L1 LINE L1 -2567 3579 3364 * 2545 160 44 48 chr20 5402034 5402559 -61265446 + L1MA9 LINE L1 5768 6290 -22 180 0 0 0 chr20 5402567 5402587 -61265418 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 6691 185 58 51 chr20 5402589 5403340 -61264665 + L1MD1 LINE L1 14 758 -5782 2017 123 0 27 chr20 5403340 5403640 -61264365 + AluSx SINE Alu 1 292 -20 6691 185 58 51 chr20 5403640 5404972 -61263033 + L1MD1 LINE L1 758 2453 -4087 3372 241 43 18 chr20 5404967 5405059 -61262946 + L1MD1 LINE L1 4158 4246 -2294 * 737 238 0 0 chr20 5405059 5405185 -61262820 + FLAM_A SINE Alu 1 126 -7 3372 241 43 18 chr20 5405185 5406041 -61261964 + L1MD1 LINE L1 4246 5130 -1410 1798 166 31 17 chr20 5406043 5406392 -61261613 - MLT1A1 LTR MaLR 0 365 12 2262 197 44 49 chr20 5406404 5407488 -61260517 + L1MD1 LINE L1 5129 6214 -422 5405 66 19 9 chr20 5407494 5408177 -61259828 + L1PA10 LINE L1 5479 6168 0 2491 151 44 2 chr20 5408177 5408586 -61259419 + L1MD1 LINE L1 6208 6636 0 2061 109 3 3 chr20 5408594 5408908 -61259097 + AluSx SINE Alu 1 314 0 2123 102 0 23 chr20 5409001 5409304 -61258701 - AluSc SINE Alu -12 297 2 451 270 65 99 chr20 5409466 5410183 -61257822 + L1MC4a LINE L1 5255 5931 -231 3144 133 44 11 chr20 5411000 5411542 -61256463 + L1MC1 LINE L1 5383 5942 -391 1073 210 58 0 chr20 5411540 5411764 -61256241 - L1ME LINE L1 -540 5624 5388 * 565 189 217 0 chr20 5412291 5412434 -61255571 - MER5A DNA MER1_type -7 182 9 2486 129 65 8 chr20 5412615 5413017 -61254988 - MSTB1 LTR MaLR 0 432 8 318 231 17 0 chr20 5413143 5413234 -61254771 + L1ME LINE L1 5750 5817 -304 1227 259 171 23 chr20 5413815 5414243 -61253762 + LTR16C LTR ERVL 1 491 0 917 240 132 12 chr20 5414542 5414830 -61253175 - HAL1 LINE L1 -2114 393 58 2080 144 0 3 chr20 5414830 5415129 -61252876 + AluSx SINE Alu 1 298 -14 917 240 132 12 chr20 5415129 5415173 -61252832 - HAL1 LINE L1 -2449 58 21 502 265 27 27 chr20 5415276 5415423 -61252582 - MER5A DNA MER1_type -3 186 40 464 354 91 30 chr20 5415538 5415900 -61252105 - L3 LINE CR1 -174 1403 1020 1837 163 35 0 chr20 5417288 5417577 -61250428 - AluJo SINE Alu -13 299 1 231 36 0 0 chr20 5418098 5418126 -61249879 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 1490 111 0 5 chr20 5418387 5418594 -61249411 - AluY SINE Alu -105 206 1 188 283 120 22 chr20 5418801 5418893 -61249112 + MIR SINE MIR 30 130 -78 342 0 0 0 chr20 5419011 5419049 -61248956 + (TC)n Simple_repeat Simple_repeat 2 39 0 2059 83 4 0 chr20 5419718 5419997 -61248008 + AluSp SINE Alu 32 311 0 1477 212 33 44 chr20 5420086 5420449 -61247556 - MLT1A1 LTR MaLR -6 359 1 614 211 68 84 chr20 5420678 5420915 -61247090 + LTR16A1 LTR ERVL 205 437 -20 1486 225 15 0 chr20 5421226 5421550 -61246455 - L1MA9 LINE L1 -34 6278 5950 693 204 0 0 chr20 5421560 5421692 -61246313 + MIR SINE MIR 59 190 -72 506 261 86 39 chr20 5422623 5423064 -61244941 + LTR33 LTR ERVL 14 521 0 207 0 0 0 chr20 5424130 5424153 -61243852 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 419 288 0 14 chr20 5424258 5424397 -61243608 - L1M4 LINE L1 -1300 4846 4710 343 333 63 8 chr20 5424442 5424694 -61243311 - L1M4 LINE L1 -1819 4327 4062 8493 31 0 1 chr20 5424738 5426463 -61241542 - L1PA3 LINE L1 0 6155 4431 10768 26 0 0 chr20 5426463 5427733 -61240272 + L1P LINE L1 2693 3962 -2184 274 155 0 28 chr20 5428018 5428089 -61239916 + CT-rich Low_complexity Low_complexity 1 69 0 3524 195 19 2 chr20 5428803 5429438 -61238567 + MER82 DNA MER2_type 1 646 -7 948 106 8 0 chr20 5430531 5430663 -61237342 - MLT1D LTR MaLR 0 505 373 15922 195 30 14 chr20 5430670 5434477 -61233528 + L1PB1 LINE L1 6 4134 -2733 2071 95 0 0 chr20 5434477 5434750 -61233255 + AluY SINE Alu 39 311 0 15922 195 30 14 chr20 5434750 5437525 -61230480 + L1PB1 LINE L1 4134 6863 -4 530 211 261 0 chr20 5437587 5437729 -61230276 - MLT1D LTR MaLR -118 387 209 189 0 0 0 chr20 5437755 5437776 -61230229 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 733 214 0 0 chr20 5437782 5437899 -61230106 - FLAM_C SINE Alu -25 118 2 1133 174 18 28 chr20 5437918 5438136 -61229869 - MLT1D LTR MaLR -289 216 1 1894 141 28 0 chr20 5438427 5438710 -61229295 + AluJb SINE Alu 14 304 -8 1978 141 8 57 chr20 5438711 5439079 -61228926 + L1MA8 LINE L1 5942 6291 0 198 289 14 41 chr20 5439483 5439632 -61228373 - L3 LINE CR1 -885 692 473 23 0 0 0 chr20 5440807 5440830 -61227175 + AT_rich Low_complexity Low_complexity 1 23 0 32 57 0 0 chr20 5441700 5441753 -61226252 + AT_rich Low_complexity Low_complexity 1 53 0 458 255 145 30 chr20 5443574 5443774 -61224231 - MIR SINE MIR -3 259 37 1522 194 45 17 chr20 5444681 5444969 -61223036 - AluJo SINE Alu -12 300 5 2205 123 0 0 chr20 5445453 5445746 -61222259 + AluSx SINE Alu 1 293 -19 1069 147 57 6 chr20 5445874 5446263 -61221742 + LTR64 LTR ERVK 1 552 -6 180 398 48 0 chr20 5446792 5446875 -61221130 + MIR SINE MIR 58 144 -118 426 85 0 0 chr20 5446925 5446984 -61221021 + (TG)n Simple_repeat Simple_repeat 1 59 0 27 29 0 0 chr20 5447995 5448029 -61219976 + AT_rich Low_complexity Low_complexity 1 34 0 1998 139 10 7 chr20 5448170 5448471 -61219534 - AluSx SINE Alu -10 302 1 228 167 0 21 chr20 5448554 5448602 -61219403 + (CAAA)n Simple_repeat Simple_repeat 1 47 0 190 222 37 136 chr20 5449124 5449205 -61218800 - MIR SINE MIR -81 181 109 194 0 39 0 chr20 5449752 5449778 -61218227 + (TTG)n Simple_repeat Simple_repeat 2 28 0 2090 128 7 0 chr20 5449780 5450078 -61217927 - AluSx SINE Alu -12 300 1 446 315 78 30 chr20 5451465 5451697 -61216308 + MIR SINE MIR 20 262 0 250 98 0 24 chr20 5452390 5452431 -61215574 + MER9 LTR ERVK 1 40 -471 21743 59 5 3 chr20 5452431 5455073 -61212932 + HERVK9 LTR ERVK 138 2786 -3130 1933 48 0 0 chr20 5455073 5455304 -61212701 + HERVK9 LTR ERVK 3711 3941 -1975 * 7987 94 2 3 chr20 5455303 5456357 -61211648 + HERVK9 LTR ERVK 4582 5634 -282 2269 94 44 13 chr20 5456382 5456727 -61211278 + HERVK9 LTR ERVK 4936 5916 0 3715 77 8 49 chr20 5456727 5457260 -61210745 + MER9 LTR ERVK 1 511 0 1949 187 49 55 chr20 5457755 5458263 -61209742 - MLT1D LTR MaLR 0 505 1 322 242 50 115 chr20 5458484 5458666 -61209339 + MIR3 SINE MIR 18 187 -21 315 242 24 23 chr20 5459207 5459383 -61208622 + LTR16C LTR ERVL 240 490 -1 3653 65 0 0 chr20 5460099 5460543 -61207462 + MLT2A1 LTR ERVL 1 444 0 359 289 25 8 chr20 5460544 5460665 -61207340 - MER5A DNA MER1_type -7 182 60 2396 81 0 0 chr20 5460667 5460952 -61207053 - AluSq SINE Alu -26 287 3 1524 97 8 24 chr20 5461464 5461712 -61206293 + L1MA5 LINE L1 6055 6298 -2 592 217 67 27 chr20 5461907 5462094 -61205911 + L1ME3 LINE L1 5883 6074 -88 238 299 0 0 chr20 5463629 5463696 -61204309 + L2 LINE L2 3245 3311 -2 300 258 0 62 chr20 5466051 5466148 -61201857 - Charlie8 DNA MER1_type -2212 205 115 183 220 40 0 chr20 5466247 5466297 -61201708 + MIR3 SINE MIR 150 201 -7 727 278 122 16 chr20 5466833 5467203 -61200802 - LTR16C LTR ERVL 0 491 83 204 40 0 0 chr20 5468149 5468174 -61199831 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 901 193 0 0 chr20 5468174 5468324 -61199681 - FRAM SINE Alu -16 150 1 1347 190 6 100 chr20 5468341 5468672 -61199333 - AluJb SINE Alu -2 300 1 472 289 0 72 chr20 5468790 5468846 -61199159 + L1ME LINE L1 5548 5606 -515 1763 175 10 7 chr20 5468846 5469138 -61198867 + AluJo SINE Alu 1 293 -19 472 289 0 72 chr20 5469138 5469289 -61198716 + L1ME LINE L1 5606 5740 -381 2490 70 3 6 chr20 5470045 5470357 -61197648 - AluY SINE Alu 0 311 1 319 203 16 0 chr20 5470821 5470885 -61197120 - LTR16C LTR ERVL 0 491 427 353 222 20 10 chr20 5470923 5471022 -61196983 - MLT1H LTR MaLR -419 130 31 297 265 10 20 chr20 5471105 5471207 -61196798 + LTR67 LTR ERVL 457 557 0 270 206 165 52 chr20 5471211 5471308 -61196697 - MIR SINE MIR -147 115 8 2689 122 34 5 chr20 5472647 5473065 -61194940 - L1PA15 LINE L1 -5 6160 5731 198 0 0 0 chr20 5473315 5473337 -61194668 + (TTTG)n Simple_repeat Simple_repeat 1 22 0 2494 36 0 0 chr20 5473337 5473616 -61194389 - AluY SINE Alu -32 279 1 388 0 0 0 chr20 5473997 5474044 -61193961 + L1PA3 LINE L1 6106 6152 -3 318 285 176 6 chr20 5475178 5475343 -61192662 - MER91A DNA MER1_type -2 194 2 801 212 0 18 chr20 5477462 5477632 -61190373 - MER5B DNA MER1_type -3 175 9 2151 118 20 3 chr20 5477716 5478021 -61189984 - AluSx SINE Alu -2 310 1 5469 150 10 18 chr20 5478174 5479102 -61188903 - MER49 LTR ERV1 0 923 4 2742 203 59 89 chr20 5479106 5479950 -61188055 - MER49-int LTR ERV1 -1 6757 5939 471 98 113 217 chr20 5479952 5480025 -61187980 - MER49-int LTR ERV1 -1367 4964 4885 1891 152 49 21 chr20 5480025 5480353 -61187652 - MER1B DNA MER1_type 0 337 1 471 98 113 217 chr20 5480353 5480410 -61187595 - MER49-int LTR ERV1 -1446 4885 4860 816 154 0 0 chr20 5480410 5480533 -61187472 - FLAM_C SINE Alu -9 124 2 471 98 113 217 chr20 5480533 5480604 -61187401 - MER49-int LTR ERV1 -1471 4860 4783 497 161 7 72 chr20 5480752 5480956 -61187049 - MER49-int LTR ERV1 -4167 3953 3786 573 189 56 39 chr20 5481117 5481355 -61186650 - LTR49-int LTR ERV1 -1865 4733 3913 918 174 7 7 chr20 5481360 5481515 -61186490 + FRAM SINE Alu 4 158 -18 3011 144 29 8 chr20 5481552 5482183 -61185822 - Ricksha DNA DNA -1368 1878 1201 1263 135 333 7 chr20 5482181 5482463 -61185542 - Ricksha DNA DNA -2870 376 3 * 347 268 95 60 chr20 5482472 5482640 -61185365 - MLT1H LTR MaLR -252 297 124 365 0 22 0 chr20 5482870 5482915 -61185090 + (TG)n Simple_repeat Simple_repeat 2 47 0 6864 68 13 13 chr20 5482952 5483944 -61184061 - L1PA10 LINE L1 -3 6165 5171 1432 279 109 33 chr20 5484059 5484777 -61183228 + L1MC4 LINE L1 7270 8041 -1 188 33 0 33 chr20 5484872 5484902 -61183103 + (CAA)n Simple_repeat Simple_repeat 2 30 0 12030 181 37 15 chr20 5485427 5487271 -61180734 + L1MB3 LINE L1 25 1825 -4594 2090 153 3 0 chr20 5487271 5487578 -61180427 - AluJb SINE Alu -4 308 1 12030 181 37 15 chr20 5487578 5490825 -61177180 + L1MB3 LINE L1 1825 5188 -1231 1870 157 16 16 chr20 5490825 5491137 -61176868 - AluJb SINE Alu 0 312 1 12030 181 37 15 chr20 5491137 5492397 -61175608 + L1MB3 LINE L1 5188 6418 -1 28 0 0 0 chr20 5493952 5493980 -61174025 + AT_rich Low_complexity Low_complexity 1 28 0 242 307 79 0 chr20 5494955 5495056 -61172949 + L2 LINE L2 2928 3036 -236 1740 166 5 93 chr20 5495413 5495810 -61172195 - MLT1A1 LTR MaLR 0 365 4 488 294 77 21 chr20 5495818 5496053 -61171952 - MIR SINE MIR -10 252 5 1956 185 75 23 chr20 5496975 5497413 -61170592 + MLT1C LTR MaLR 6 466 -1 491 270 18 25 chr20 5497425 5497588 -61170417 + MER5B DNA MER1_type 17 178 0 415 250 0 0 chr20 5498051 5498139 -61169866 + MER5A DNA MER1_type 15 102 -87 838 234 27 0 chr20 5498499 5498683 -61169322 + MER5A DNA MER1_type 1 189 0 1109 191 132 0 chr20 5498789 5499024 -61168981 + L1ME3A LINE L1 5707 5972 -198 2030 123 19 32 chr20 5499136 5499445 -61168560 - AluSx SINE Alu -7 305 1 555 261 6 22 chr20 5499498 5499678 -61168327 + L1ME3A LINE L1 5989 6165 -5 315 367 14 14 chr20 5500496 5500643 -61167362 - MIR3 SINE MIR -24 184 38 2637 102 8 8 chr20 5500835 5501189 -61166816 - THE1A LTR MaLR 0 355 2 2372 42 0 17 chr20 5501208 5501528 -61166477 - AluY SINE Alu 0 315 1 26 30 0 0 chr20 5501528 5501561 -61166444 + AT_rich Low_complexity Low_complexity 1 33 0 259 295 77 0 chr20 5501660 5501738 -61166267 - L2 LINE L2 -25 3247 3164 21 57 0 0 chr20 5502220 5502255 -61165750 + AT_rich Low_complexity Low_complexity 1 35 0 204 319 76 17 chr20 5502293 5502412 -61165593 - L3 LINE CR1 -315 1262 1137 28 48 0 0 chr20 5502500 5502542 -61165463 + AT_rich Low_complexity Low_complexity 1 42 0 191 39 39 59 chr20 5502612 5502663 -61165342 + (TTAAA)n Simple_repeat Simple_repeat 1 50 0 22 0 0 0 chr20 5502663 5502685 -61165320 + AT_rich Low_complexity Low_complexity 1 22 0 184 359 39 0 chr20 5502769 5502872 -61165133 + L3 LINE CR1 1137 1243 -334 252 265 31 20 chr20 5502877 5502975 -61165030 - LTR67 LTR ERVL 0 557 459 243 302 147 9 chr20 5503308 5503424 -61164581 + L2 LINE L2 3137 3268 -4 226 339 52 9 chr20 5503442 5503557 -61164448 + L3 LINE CR1 1283 1402 -175 357 305 116 12 chr20 5503631 5503795 -61164210 + MLT1K LTR MaLR 31 211 -377 431 303 49 6 chr20 5504127 5504289 -61163716 + MER117 DNA MER1_type 29 197 0 720 208 13 0 chr20 5504339 5504493 -61163512 - MER3 DNA MER1_type 0 2585 2430 470 177 0 0 chr20 5504491 5504570 -61163435 - MER3 DNA MER1_type -92 117 39 * 331 299 24 24 chr20 5504570 5504697 -61163308 - MIR3 SINE MIR -12 196 70 2535 186 38 30 chr20 5504747 5505248 -61162757 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr20 5506061 5506082 -61161923 + AT_rich Low_complexity Low_complexity 1 21 0 414 289 44 13 chr20 5506142 5506301 -61161704 - MIR3 SINE MIR -11 197 34 850 294 82 8 chr20 5506903 5507257 -61160748 + L1M4 LINE L1 4970 5349 -797 2343 93 0 3 chr20 5507569 5507870 -61160135 + AluY SINE Alu 1 300 -11 577 166 83 78 chr20 5507874 5508018 -61159987 + Charlie2 DNA MER1_type 2654 2801 -61 2187 165 40 3 chr20 5508018 5508370 -61159635 - MLT1A1 LTR MaLR 0 365 1 577 166 83 78 chr20 5508370 5508430 -61159575 + Charlie2 DNA MER1_type 2801 2859 -3 2445 73 0 0 chr20 5509066 5509369 -61158636 - AluY SINE Alu -8 303 1 200 256 0 0 chr20 5509721 5509764 -61158241 - L3 LINE CR1 -3 1574 1532 540 248 88 44 chr20 5510145 5510284 -61157721 + MIR SINE MIR 24 178 -84 2412 219 56 19 chr20 5510284 5510804 -61157201 + MLT1F LTR MaLR 4 542 0 540 248 88 44 chr20 5510804 5510890 -61157115 + MIR SINE MIR 178 259 -3 27 29 0 0 chr20 5511329 5511363 -61156642 + AT_rich Low_complexity Low_complexity 1 34 0 336 248 103 8 chr20 5511951 5512068 -61155937 - MIR SINE MIR -75 187 60 590 135 198 18 chr20 5512173 5512284 -61155721 + FLAM_C SINE Alu 1 131 -2 278 111 111 0 chr20 5512306 5512360 -61155645 - L1MB1 LINE L1 0 6168 6109 5196 127 10 6 chr20 5512398 5513115 -61154890 - MER72 LTR ERV1 0 722 3 1058 173 0 0 chr20 5513265 5513433 -61154572 + LTR54 LTR ERV1 1 168 -342 2327 184 108 30 chr20 5513470 5514007 -61153998 + LTR8 LTR ERV1 113 691 0 518 202 32 0 chr20 5514012 5514136 -61153869 + LTR54B LTR ERV1 365 492 -6 2574 158 40 40 chr20 5514271 5514777 -61153228 - MER34C LTR ERV1 -79 506 1 2272 105 3 0 chr20 5515221 5515517 -61152488 - AluSg SINE Alu -13 297 1 2625 166 66 130 chr20 5515746 5516523 -61151482 - LTR8A LTR ERV1 0 727 1 1995 151 169 17 chr20 5516557 5516960 -61151045 - MER31B LTR ERV1 0 466 3 257 241 69 23 chr20 5517252 5517339 -61150666 + L1ME3A LINE L1 5970 6060 -110 1896 128 35 25 chr20 5517522 5517804 -61150201 + THE1B LTR MaLR 80 364 0 511 333 56 17 chr20 5517806 5518217 -61149788 + L1M4 LINE L1 4743 5169 -977 652 226 99 32 chr20 5518283 5518504 -61149501 + L2 LINE L2 1342 1577 -1737 4124 139 77 9 chr20 5518514 5519174 -61148831 + MER39 LTR ERV1 3 707 0 1663 275 125 27 chr20 5519203 5519489 -61148516 + L2 LINE L2 2244 2501 -812 1954 146 3 3 chr20 5519489 5519776 -61148229 + AluJo SINE Alu 1 287 -25 279 0 0 0 chr20 5519777 5519808 -61148197 + (CA)n Simple_repeat Simple_repeat 2 32 0 1663 275 125 27 chr20 5519808 5520360 -61147645 + L2 LINE L2 2500 3162 -151 275 253 0 40 chr20 5521512 5521587 -61146418 - L1MD2 LINE L1 -262 6097 6026 1613 179 137 23 chr20 5521588 5521974 -61146031 - MER45B DNA AcHobo 0 1040 611 396 221 176 22 chr20 5522450 5522586 -61145419 + MIR SINE MIR 3 159 -103 351 190 220 0 chr20 5522598 5522698 -61145307 - L1ME3A LINE L1 -1 6169 6048 355 233 14 0 chr20 5522722 5522795 -61145210 + MIR SINE MIR 168 241 -21 23 0 0 0 chr20 5524221 5524244 -61143761 + AT_rich Low_complexity Low_complexity 1 23 0 180 77 0 0 chr20 5524323 5524349 -61143656 + (TG)n Simple_repeat Simple_repeat 2 27 0 1166 274 100 52 chr20 5525084 5525583 -61142422 + MLT1G1 LTR MaLR 73 595 0 801 189 8 0 chr20 5526572 5526699 -61141306 - FLAM_C SINE Alu -14 129 2 198 244 35 58 chr20 5526890 5526976 -61141029 + MIR SINE MIR 173 256 -6 256 271 8 17 chr20 5527011 5527129 -61140876 + (TA)n Simple_repeat Simple_repeat 1 117 0 186 133 0 0 chr20 5527523 5527553 -61140452 + (ATG)n Simple_repeat Simple_repeat 3 32 0 183 288 51 0 chr20 5527557 5527616 -61140389 - MIR SINE MIR -8 254 193 193 318 162 26 chr20 5527652 5527806 -61140199 - MIR3 SINE MIR -17 191 17 235 176 39 20 chr20 5527960 5528011 -61139994 + L1ME2 LINE L1 5998 6049 -115 2198 100 0 61 chr20 5528017 5528347 -61139658 + AluSx SINE Alu 1 310 -2 241 248 15 128 chr20 5528352 5528485 -61139520 + L1ME2 LINE L1 6038 6155 -9 493 108 14 0 chr20 5528550 5528624 -61139381 - MSTB1 LTR MaLR 0 426 352 4902 14 0 0 chr20 5528624 5529529 -61138476 - L1P1 LINE L1 -422 5733 4829 3715 17 0 0 chr20 5529528 5529945 -61138060 + L1HS LINE L1 5739 6155 0 * 24 0 0 0 chr20 5529945 5529969 -61138036 + AT_rich Low_complexity Low_complexity 1 24 0 1141 165 151 58 chr20 5529969 5530396 -61137609 - MSTB1 LTR MaLR -55 377 1 21 36 0 0 chr20 5530789 5530817 -61137188 + AT_rich Low_complexity Low_complexity 1 28 0 15532 158 33 17 chr20 5531525 5533836 -61134169 + L1MA4A LINE L1 857 3131 -3874 858 165 0 15 chr20 5533836 5533969 -61134036 + FLAM_C SINE Alu 1 131 -2 15532 158 33 17 chr20 5533969 5535696 -61132309 + L1MA4A LINE L1 3131 4830 -2175 2271 113 0 3 chr20 5535696 5535996 -61132009 + AluSc SINE Alu 1 299 -10 15532 158 33 17 chr20 5535996 5538005 -61130000 + L1MA4A LINE L1 4830 7003 -2 485 284 152 52 chr20 5538049 5538918 -61129087 + L1 LINE L1 2187 3142 -3004 368 285 85 41 chr20 5538932 5539178 -61128827 + L1 LINE L1 3195 3451 -2695 1141 287 6 33 chr20 5539599 5539965 -61128040 + MER90 LTR ERV1 258 613 -1 1800 181 10 0 chr20 5540080 5540389 -61127616 + AluJb SINE Alu 1 312 0 181 216 27 0 chr20 5540975 5541012 -61126993 - L2 LINE L2 -25 3247 3210 397 326 52 17 chr20 5541021 5541081 -61126924 - MER5A DNA MER1_type -3 186 130 1743 181 3 30 chr20 5541081 5541385 -61126620 - AluJo SINE Alu -16 296 1 397 326 52 17 chr20 5541385 5541496 -61126509 - MER5A DNA MER1_type -59 130 9 304 308 115 0 chr20 5541536 5541640 -61126365 + MER5B DNA MER1_type 1 116 -62 390 331 51 6 chr20 5541673 5541830 -61126175 - MIR SINE MIR -94 168 5 5712 55 1 12 chr20 5542502 5543188 -61124817 - L1PA7 LINE L1 0 6154 5476 8849 80 4 2 chr20 5543192 5544460 -61123545 + L1PA7 LINE L1 4214 5482 -690 464 262 32 24 chr20 5545742 5545868 -61122137 + MER5B DNA MER1_type 4 130 -48 816 193 17 33 chr20 5545874 5546055 -61121950 - MER5B DNA MER1_type 0 178 1 265 86 0 0 chr20 5548161 5548196 -61119809 + U1 snRNA snRNA 1 35 -130 260 367 148 33 chr20 5548306 5548576 -61119429 + L2 LINE L2 2886 3186 -86 688 265 101 14 chr20 5549644 5549994 -61118011 + LTR33 LTR ERVL 49 513 -8 190 306 24 47 chr20 5550408 5550493 -61117512 + L2 LINE L2 2890 2972 -300 2179 148 98 25 chr20 5550697 5551096 -61116909 - MSTA LTR MaLR 0 428 1 8603 162 26 60 chr20 5551096 5552804 -61115201 - MSTA-int LTR MaLR 0 1651 2 51 17 0 0 chr20 5552874 5552932 -61115073 + AT_rich Low_complexity Low_complexity 1 58 0 2276 129 59 38 chr20 5552932 5553304 -61114701 - MSTA LTR MaLR -48 380 1 1241 172 89 41 chr20 5553674 5554120 -61113885 + LTR55 LTR ERV 1 519 -29 675 310 130 43 chr20 5555046 5555630 -61112375 + L2 LINE L2 252 886 -2428 286 229 203 8 chr20 5556106 5556224 -61111781 + MIR SINE MIR 72 212 -50 215 225 14 0 chr20 5556342 5556413 -61111592 + (TGAA)n Simple_repeat Simple_repeat 3 74 0 347 321 23 0 chr20 5556580 5556711 -61111294 - MIR SINE MIR -70 192 59 404 207 23 0 chr20 5556783 5556870 -61111135 - LTR16A LTR ERVL -218 232 144 4153 171 76 36 chr20 5557612 5558441 -61109564 - MER21B LTR ERV1 0 863 2 1702 100 4 13 chr20 5558627 5558857 -61109148 + AluSx SINE Alu 1 228 -84 24 0 0 0 chr20 5559049 5559073 -61108932 + AT_rich Low_complexity Low_complexity 1 24 0 526 206 18 88 chr20 5559694 5559864 -61108141 - L1ME3 LINE L1 -2 6160 6003 208 360 202 0 chr20 5560420 5560623 -61107382 - MIR SINE MIR -5 257 14 1812 194 93 63 chr20 5561597 5561740 -61106265 + MLT2B1 LTR ERVL 1 138 -382 2152 120 37 35 chr20 5561740 5562114 -61105891 + THE1C LTR MaLR 1 375 0 1812 194 93 63 chr20 5562114 5562475 -61105530 + MLT2B1 LTR ERVL 138 520 0 468 218 0 0 chr20 5562567 5562668 -61105337 - MER5A DNA MER1_type -80 109 9 1464 258 52 31 chr20 5563378 5563823 -61104182 - MER115 DNA AcHobo -4 689 236 2593 124 48 10 chr20 5564133 5564545 -61103460 - MSTA LTR MaLR 0 428 1 222 316 0 13 chr20 5565081 5565160 -61102845 + L2 LINE L2 3173 3250 -22 316 257 65 41 chr20 5565278 5565494 -61102511 + MLT1H LTR MaLR 19 247 -162 1376 177 52 72 chr20 5565591 5565896 -61102109 + AluJo SINE Alu 1 299 -13 257 222 14 17 chr20 5565918 5566010 -61101995 + MLT1J2 LTR MaLR 364 624 -2 10566 25 1 0 chr20 5566247 5568235 -61099770 - L1PA3 LINE L1 0 6155 4167 2510 123 9 61 chr20 5568236 5568572 -61099433 - MER34B LTR ERV1 -163 402 91 2231 115 0 13 chr20 5568572 5568877 -61099128 - AluSx SINE Alu -11 301 1 2510 123 9 61 chr20 5568877 5568964 -61099041 - MER34B LTR ERV1 -474 91 1 184 143 0 24 chr20 5569080 5569122 -61098883 + L2 LINE L2 3273 3313 0 339 224 122 0 chr20 5569145 5569252 -61098753 - MIR3 SINE MIR -49 159 40 323 286 0 0 chr20 5569311 5569388 -61098617 + MER94 DNA DNA 2 78 -56 5582 153 16 19 chr20 5569388 5569506 -61098499 + L1PB3 LINE L1 4793 4910 -1244 2380 93 6 0 chr20 5569506 5569817 -61098188 - AluSp SINE Alu 0 313 1 5582 153 16 19 chr20 5569817 5571074 -61096931 + L1PB3 LINE L1 4910 6153 -1 2062 147 7 85 chr20 5571176 5571363 -61096642 + MLT1B LTR MaLR 1 138 -252 1598 183 52 3 chr20 5571363 5571653 -61096352 + AluJb SINE Alu 5 308 -4 2062 147 7 85 chr20 5571653 5571888 -61096117 + MLT1B LTR MaLR 138 390 0 837 308 61 8 chr20 5572013 5572373 -61095632 + MLT2F LTR ERVL 4 382 -281 * 1791 175 64 63 chr20 5572367 5572769 -61095236 - MLT1D LTR MaLR -82 385 3 566 292 139 17 chr20 5573101 5573454 -61094551 + HAL1 LINE L1 2074 2469 -38 2240 114 0 64 chr20 5574480 5574840 -61093165 - MER1B DNA MER1_type 0 337 1 2273 102 0 0 chr20 5576093 5576400 -61091605 + AluSx SINE Alu 1 307 0 475 285 50 53 chr20 5576549 5576776 -61091229 - MIR SINE MIR -14 248 22 1129 209 0 5 chr20 5577050 5577261 -61090744 + MER63A DNA MER1_type 1 210 0 2095 139 0 3 chr20 5577574 5577877 -61090128 + AluSx SINE Alu 1 302 -10 2412 103 0 0 chr20 5578681 5578993 -61089012 - AluSx SINE Alu 0 312 1 2389 173 48 52 chr20 5581205 5581721 -61086284 - MLT2B2 LTR ERVL 0 515 2 743 164 0 16 chr20 5583846 5583974 -61084031 + FLAM_C SINE Alu 1 126 -17 433 305 108 0 chr20 5584176 5584343 -61083662 + MIR SINE MIR 4 188 -74 3773 221 73 44 chr20 5584592 5585308 -61082697 - L1MC3 LINE L1 0 7807 7113 192 97 0 0 chr20 5585308 5585339 -61082666 + (TTTA)n Simple_repeat Simple_repeat 4 34 0 3773 221 73 44 chr20 5585339 5586072 -61081933 - L1MC3 LINE L1 -694 7113 6403 342 0 0 0 chr20 5586072 5586110 -61081895 + (TC)n Simple_repeat Simple_repeat 2 39 0 * 369 0 0 0 chr20 5586109 5586150 -61081855 + (TA)n Simple_repeat Simple_repeat 2 42 0 3773 221 73 44 chr20 5586110 5586304 -61081701 - L1MC3 LINE L1 -1404 6403 6272 2253 124 0 0 chr20 5586588 5586887 -61081118 + AluSx SINE Alu 1 299 -13 7734 129 2 11 chr20 5587145 5588122 -61079883 - L1PA10 LINE L1 0 6168 5184 2283 120 0 3 chr20 5588122 5588430 -61079575 - AluSg SINE Alu -3 307 1 7734 129 2 11 chr20 5588430 5589438 -61078567 - L1PA10 LINE L1 -984 5184 4185 5657 144 1 7 chr20 5589438 5590360 -61077645 + L1PA10 LINE L1 3261 4177 -1969 2155 128 103 30 chr20 5591456 5591855 -61076150 + MSTA LTR MaLR 1 428 0 22 70 0 0 chr20 5592380 5592423 -61075582 + AT_rich Low_complexity Low_complexity 1 43 0 216 182 23 0 chr20 5593040 5593084 -61074921 + MIR SINE MIR 108 152 -56 2114 217 97 4 chr20 5593992 5594476 -61073529 - MLT1F LTR MaLR -13 529 1 2138 117 0 0 chr20 5595401 5595714 -61072291 - AluSg SINE Alu 0 313 1 186 289 12 36 chr20 5595820 5595903 -61072102 - MIR SINE MIR -56 206 126 34 42 0 0 chr20 5596113 5596161 -61071844 + AT_rich Low_complexity Low_complexity 1 48 0 212 274 69 10 chr20 5596747 5596849 -61071156 - MIR SINE MIR -65 143 36 493 107 0 12 chr20 5596941 5597025 -61070980 - Alu SINE Alu 0 312 230 2647 153 35 31 chr20 5597869 5598298 -61069707 - LTR34 LTR ERV1 0 699 266 2217 117 0 16 chr20 5598298 5598435 -61069570 + AluSx SINE Alu 1 139 -173 2281 116 10 0 chr20 5598435 5598737 -61069268 + AluSq SINE Alu 1 305 -8 2217 117 0 16 chr20 5598737 5598906 -61069099 + AluSx SINE Alu 139 302 -10 2647 153 35 31 chr20 5598906 5598958 -61069047 - LTR34 LTR ERV1 -433 266 216 1669 174 17 17 chr20 5598958 5599252 -61068753 - MER41D LTR ERV1 0 557 264 667 143 29 0 chr20 5599254 5599359 -61068646 + FLAM_C SINE Alu 11 118 -25 252 156 0 0 chr20 5599383 5599406 -61068599 + A-rich Low_complexity Low_complexity 1 23 -22 2542 68 0 0 chr20 5599406 5599717 -61068288 + AluY SINE Alu 1 311 0 252 156 0 0 chr20 5599717 5599738 -61068267 + A-rich Low_complexity Low_complexity 22 45 0 1509 185 9 56 chr20 5599743 5600062 -61067943 + AluJb SINE Alu 1 304 -8 320 176 15 0 chr20 5600069 5600137 -61067868 + GA-rich Low_complexity Low_complexity 3 71 0 1781 138 4 0 chr20 5600139 5600408 -61067597 - MER41D LTR ERV1 -283 274 5 1347 106 63 0 chr20 5600405 5600612 -61067393 - LTR34 LTR ERV1 -479 220 1 * 204 40 0 0 chr20 5600845 5600870 -61067135 + (CCCCCT)n Simple_repeat Simple_repeat 4 28 0 6404 62 5 290 chr20 5600874 5602705 -61065300 + SVA Other Other 61 1369 -17 414 0 0 0 chr20 5602712 5602758 -61065247 + (TA)n Simple_repeat Simple_repeat 2 47 0 6952 125 41 56 chr20 5602784 5603150 -61064855 - LTR49-int LTR ERV1 -352 5979 5609 2243 115 3 0 chr20 5603150 5603445 -61064560 + AluSx SINE Alu 1 296 -16 6952 125 41 56 chr20 5603445 5603658 -61064347 - LTR49-int LTR ERV1 -722 5609 5394 1486 188 94 0 chr20 5603658 5603935 -61064070 - AluJo SINE Alu -7 305 3 6952 125 41 56 chr20 5603935 5604082 -61063923 - LTR49-int LTR ERV1 -937 5394 5246 1860 160 3 20 chr20 5604082 5604388 -61063617 + AluJb SINE Alu 1 301 -11 6952 125 41 56 chr20 5604388 5604818 -61063187 - LTR49-int LTR ERV1 -1085 5246 4811 2412 94 0 3 chr20 5604818 5605115 -61062890 + AluSx SINE Alu 1 296 -16 6952 125 41 56 chr20 5605115 5605261 -61062744 - LTR49-int LTR ERV1 -1520 4811 4694 1811 179 7 3 chr20 5605261 5605562 -61062443 - AluJb SINE Alu -10 302 1 6952 125 41 56 chr20 5605562 5605637 -61062368 - LTR49-int LTR ERV1 -1637 4694 4619 29685 113 14 56 chr20 5605637 5606779 -61061226 - L1PA8 LINE L1 -2 6170 4982 2327 113 0 0 chr20 5606779 5607079 -61060926 - AluSq SINE Alu -13 300 1 29685 113 14 56 chr20 5607079 5612375 -61055630 - L1PA8 LINE L1 -1190 4982 7 3174 129 19 19 chr20 5612377 5612972 -61055033 - LTR49-int LTR ERV1 -1700 4631 4037 1323 174 24 120 chr20 5613026 5613637 -61054368 + MER52A LTR ERV1 660 1349 -406 310 235 15 52 chr20 5613627 5613763 -61054242 + LTR28 LTR ERV1 586 716 -304 * 1952 224 65 46 chr20 5613737 5614276 -61053729 + MER52A LTR ERV1 1207 1755 0 189 305 57 29 chr20 5615064 5615169 -61052836 + MIR SINE MIR 16 123 -85 405 305 61 12 chr20 5615350 5615514 -61052491 - MIR SINE MIR 0 262 91 202 313 96 26 chr20 5615558 5615673 -61052332 + MER5A DNA MER1_type 1 123 -66 201 341 0 33 chr20 5615604 5615695 -61052310 - MER5A DNA MER1_type -44 145 58 * 708 269 34 24 chr20 5615733 5615970 -61052035 + MLT1G1 LTR MaLR 4 198 -369 299 129 8 220 chr20 5616069 5616142 -61051863 - L1ME3A LINE L1 -18 6152 6118 2384 106 0 6 chr20 5616142 5616453 -61051552 - AluSq SINE Alu -4 309 1 299 129 8 220 chr20 5616453 5616511 -61051494 - L1ME3A LINE L1 -52 6118 6049 * 3437 154 53 44 chr20 5616500 5617257 -61050748 + L1MB3 LINE L1 5259 6016 -167 196 271 94 0 chr20 5617278 5617363 -61050642 + MIR SINE MIR 40 132 -76 1144 166 0 44 chr20 5617431 5617636 -61050369 + AluJb SINE Alu 111 306 -6 325 331 48 14 chr20 5618279 5618424 -61049581 + MER5B DNA MER1_type 17 166 -12 221 232 0 93 chr20 5618490 5618641 -61049364 + (CACCAT)n Simple_repeat Simple_repeat 4 140 0 468 203 198 56 chr20 5620717 5620871 -61047134 - ORSL DNA AcHobo -9 266 135 2136 110 7 0 chr20 5620871 5621163 -61046842 - AluY SINE Alu -16 295 2 468 203 198 56 chr20 5621163 5621240 -61046765 - ORSL DNA AcHobo -140 135 2 193 284 20 69 chr20 5621292 5621394 -61046611 - L2 LINE L2 -2111 1203 1107 375 281 79 9 chr20 5623604 5623718 -61044287 + MIR SINE MIR 45 166 -96 7395 51 1 0 chr20 5624541 5625700 -61042305 + L1PA5 LINE L1 4995 6154 0 227 304 83 83 chr20 5626153 5626429 -61041576 - L2 LINE L2 -30 3242 2967 2182 120 7 13 chr20 5626583 5626883 -61041122 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr20 5627422 5627444 -61040561 + AT_rich Low_complexity Low_complexity 1 22 0 782 196 0 7 chr20 5627586 5627724 -61040281 - AluJb SINE Alu -18 294 158 2200 173 40 43 chr20 5627724 5627870 -61040135 + L1M4 LINE L1 4973 5118 -1066 1696 160 0 67 chr20 5627870 5628183 -61039822 + AluJo SINE Alu 1 292 -20 2200 173 40 43 chr20 5628183 5628642 -61039363 + L1M4 LINE L1 5118 5577 -607 1944 155 3 16 chr20 5628642 5628946 -61039059 + AluJb SINE Alu 1 300 -12 2200 173 40 43 chr20 5628946 5629012 -61038993 + L1M4 LINE L1 5577 5642 -542 2286 88 3 3 chr20 5629012 5629324 -61038681 + AluSq SINE Alu 1 312 0 2200 173 40 43 chr20 5629324 5629501 -61038504 + L1M4 LINE L1 5642 5819 -365 267 254 15 15 chr20 5629506 5629573 -61038432 + AluS SINE Alu 1 67 -236 253 123 154 46 chr20 5629684 5629749 -61038256 - MER51A LTR ERV1 -94 540 469 546 270 8 0 chr20 5630024 5630150 -61037855 - MER89-int LTR ERV1 0 7816 7690 1104 318 45 37 chr20 5630363 5631165 -61036840 - MER89-int LTR ERV1 -1488 6268 5461 21 0 0 0 chr20 5632342 5632363 -61035642 + GC_rich Low_complexity Low_complexity 1 21 0 329 278 56 56 chr20 5632690 5632834 -61035171 + HAL1 LINE L1 2363 2506 -1 279 321 128 14 chr20 5633131 5633427 -61034578 + LTR16B LTR ERVL 124 453 -11 203 313 83 90 chr20 5635303 5635591 -61032414 - L2 LINE L2 -30 3242 2957 2214 110 0 3 chr20 5635938 5636230 -61031775 - AluSg SINE Alu -14 296 6 32 0 0 0 chr20 5636750 5636782 -61031223 + AT_rich Low_complexity Low_complexity 1 32 0 1268 322 58 7 chr20 5636827 5637672 -61030333 - HERVL40 LTR ERVL -431 5333 4417 2842 314 42 14 chr20 5637690 5638633 -61029372 - HERVL40 LTR ERVL -1947 3707 2703 2485 100 3 0 chr20 5638633 5638944 -61029061 - AluSp SINE Alu -1 312 1 2842 314 42 14 chr20 5638944 5639404 -61028601 - HERVL40 LTR ERVL -2951 2703 2258 2097 201 91 20 chr20 5639419 5639569 -61028436 - REP3 LTR ERV -30 532 394 447 19 0 0 chr20 5639569 5639621 -61028384 + (CA)n Simple_repeat Simple_repeat 2 53 0 2097 201 91 20 chr20 5639621 5639967 -61028038 - REP3 LTR ERV -168 394 1 409 333 0 0 chr20 5640183 5640309 -61027696 - MER89-int LTR ERV1 -406 6395 6270 379 342 54 43 chr20 5641390 5641835 -61026170 - HERVL40 LTR ERVL -2307 3223 2774 290 233 0 0 chr20 5642617 5642677 -61025328 + MER77 LTR ERV1 9 68 -537 52 0 0 0 chr20 5642845 5642897 -61025108 + AT_rich Low_complexity Low_complexity 1 52 0 1191 167 5 10 chr20 5643755 5643994 -61024011 - AluJb SINE Alu 0 330 93 614 192 0 0 chr20 5644060 5644159 -61023846 - AluJb SINE Alu -213 99 1 202 298 138 11 chr20 5644317 5644411 -61023594 + L2 LINE L2 3137 3242 -30 599 175 15 216 chr20 5644456 5644725 -61023280 - MER51A LTR ERV1 0 640 426 295 298 144 33 chr20 5645989 5646288 -61021717 - LTR16B LTR ERVL -9 455 124 180 211 56 100 chr20 5647577 5647667 -61020338 + MIR SINE MIR 63 148 -114 292 299 28 19 chr20 5648893 5649000 -61019005 - MIR SINE MIR -121 141 34 185 281 16 94 chr20 5651198 5651326 -61016679 + L2 LINE L2 1107 1224 -2090 470 197 171 63 chr20 5651352 5651429 -61016576 + ORSL DNA AcHobo 2 69 -206 2249 110 7 0 chr20 5651429 5651737 -61016268 + AluY SINE Alu 2 311 0 470 197 171 63 chr20 5651737 5651793 -61016212 + ORSL DNA AcHobo 69 118 -157 2287 56 42 7 chr20 5651793 5652078 -61015927 + AluY SINE Alu 1 295 -16 470 197 171 63 chr20 5652078 5652182 -61015823 + ORSL DNA AcHobo 118 266 -9 704 153 0 30 chr20 5653347 5653408 -61014597 - L1MB7 LINE L1 -10 6174 6113 1913 120 0 57 chr20 5653408 5653734 -61014271 + AluSx SINE Alu 1 309 0 704 153 0 30 chr20 5653734 5653802 -61014203 - L1MB7 LINE L1 -71 6113 6048 439 167 0 13 chr20 5653810 5653888 -61014117 - FLAM SINE Alu -23 120 44 2477 179 42 40 chr20 5653965 5654203 -61013802 - L1MB7 LINE L1 -366 5818 5582 1692 171 54 7 chr20 5654203 5654384 -61013621 - AluJb SINE Alu 0 312 110 321 47 0 0 chr20 5654384 5654427 -61013578 + (TTTG)n Simple_repeat Simple_repeat 4 46 0 1692 171 54 7 chr20 5654427 5654543 -61013462 - AluJb SINE Alu -202 110 1 2477 179 42 40 chr20 5654543 5654998 -61013007 - L1MB7 LINE L1 -602 5582 5129 1884 136 3 39 chr20 5654998 5655306 -61012699 - AluJo SINE Alu -15 297 1 2477 179 42 40 chr20 5655306 5655340 -61012665 - L1MB7 LINE L1 -1055 5129 5097 2392 74 24 0 chr20 5655340 5655636 -61012369 + AluSp SINE Alu 1 303 -10 2477 179 42 40 chr20 5655636 5655763 -61012242 - L1MB7 LINE L1 -1087 5097 4967 871 169 0 0 chr20 5655763 5655905 -61012100 + AluJb SINE Alu 160 301 -11 1657 150 15 4 chr20 5655905 5656165 -61011840 + AluSx SINE Alu 1 263 -49 22 35 0 0 chr20 5656178 5656207 -61011798 + AT_rich Low_complexity Low_complexity 1 29 0 197 262 0 0 chr20 5657138 5657180 -61010825 + L2 LINE L2 3137 3178 -94 2408 100 7 0 chr20 5657183 5657493 -61010512 + AluSq SINE Alu 1 312 -1 251 83 0 21 chr20 5657503 5657551 -61010454 + (CAAG)n Simple_repeat Simple_repeat 2 48 0 876 140 0 22 chr20 5659298 5659434 -61008571 + AluJo/FLAM SINE Alu 1 133 -169 2282 99 3 0 chr20 5659437 5659729 -61008276 + AluSp SINE Alu 1 293 -20 526 182 141 35 chr20 5659902 5660100 -61007905 - LTR16B LTR ERVL 0 464 246 231 221 90 97 chr20 5660531 5660676 -61007329 - HAL1 LINE L1 -1 2506 2363 21 36 0 0 chr20 5661587 5661615 -61006390 + AT_rich Low_complexity Low_complexity 1 28 0 2269 113 3 0 chr20 5661828 5662139 -61005866 - AluSx SINE Alu 0 312 1 2088 128 0 13 chr20 5662148 5662452 -61005553 - AluSx SINE Alu -12 300 1 4388 52 0 0 chr20 5663109 5663644 -61004361 + L1PA5 LINE L1 3567 4101 -2045 * 8082 36 0 0 chr20 5663633 5664594 -61003411 - L1PA4 LINE L1 -892 5254 4294 7472 37 6 0 chr20 5664594 5665478 -61002527 + L1PA4 LINE L1 5257 6154 -1 30 0 0 0 chr20 5665478 5665508 -61002497 + AT_rich Low_complexity Low_complexity 1 30 0 11008 40 3 0 chr20 5665508 5667580 -61000425 + L1PA5 LINE L1 4080 6152 -2 2067 136 0 0 chr20 5667778 5668089 -60999916 + AluSp SINE Alu 4 314 0 14988 123 21 19 chr20 5668089 5669045 -60998960 + MER50-int LTR ERV1 4932 5885 -1320 2146 106 0 7 chr20 5669045 5669349 -60998656 + AluSp SINE Alu 1 302 0 14988 123 21 19 chr20 5669349 5670653 -60997352 + MER50-int LTR ERV1 5885 7197 -8 4407 137 27 16 chr20 5670653 5671356 -60996649 + MER50 LTR ERV1 1 711 -23 663 230 149 30 chr20 5671470 5671769 -60996236 + L1ME LINE L1 5485 5809 -353 1737 174 0 39 chr20 5672093 5672266 -60995739 - AluJb SINE Alu -14 298 141 2366 103 0 3 chr20 5672266 5672567 -60995438 - AluSg SINE Alu -10 300 1 1737 174 0 39 chr20 5672567 5672703 -60995302 - AluJb SINE Alu -171 141 1 1415 161 124 18 chr20 5672706 5672979 -60995026 - AluJo SINE Alu -10 302 1 22 0 0 0 chr20 5672980 5673002 -60995003 + AT_rich Low_complexity Low_complexity 1 22 0 1192 146 92 5 chr20 5673263 5673469 -60994536 + AluJb SINE Alu 87 310 -2 561 68 0 0 chr20 5673471 5673545 -60994460 + (GGAA)n Simple_repeat Simple_repeat 3 76 0 499 218 10 0 chr20 5673747 5673848 -60994157 + FLAM_A SINE Alu 23 124 -18 2334 89 27 0 chr20 5673849 5674142 -60993863 + AluSx SINE Alu 1 301 -11 2240 79 18 0 chr20 5674170 5674489 -60993516 + AluSp SINE Alu 1 324 0 880 246 18 7 chr20 5675300 5675580 -60992425 + L1MC/D LINE L1 2805 3087 -3059 761 150 0 88 chr20 5675590 5675737 -60992268 + FLAM_C SINE Alu 10 143 0 1678 240 48 50 chr20 5675737 5676336 -60991669 + L1MC/D LINE L1 3091 3688 -2458 2184 105 3 16 chr20 5676336 5676640 -60991365 + AluSx SINE Alu 1 300 -12 1739 158 37 10 chr20 5676650 5676948 -60991057 + AluJo SINE Alu 1 306 -6 754 199 18 12 chr20 5676949 5677115 -60990890 + L1MC/D LINE L1 5599 5765 -477 225 0 0 0 chr20 5677857 5677882 -60990123 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 848 110 0 0 chr20 5677886 5678004 -60990001 - FLAM_C SINE Alu -15 118 1 241 307 52 13 chr20 5678168 5678321 -60989684 - MIR SINE MIR -39 223 65 2273 108 13 0 chr20 5678701 5679008 -60988997 - AluSp SINE Alu -2 311 1 1770 133 22 65 chr20 5679074 5679396 -60988609 - AluJo SINE Alu -4 308 1 814 147 0 0 chr20 5679434 5679550 -60988455 - AluJb SINE Alu -196 116 1 1043 296 181 21 chr20 5679736 5680554 -60987451 - L2 LINE L2 -1992 1322 374 972 182 42 0 chr20 5680561 5680753 -60987252 + Charlie5 DNA MER1_type 1 200 -2412 1875 126 3 87 chr20 5680765 5680898 -60987107 + AluJo SINE Alu 1 144 -168 1437 137 166 0 chr20 5680898 5681162 -60986843 + AluSg1 SINE Alu 1 304 0 1875 126 3 87 chr20 5681162 5681361 -60986644 + AluJo SINE Alu 144 306 -6 33 0 0 0 chr20 5681923 5681956 -60986049 + AT_rich Low_complexity Low_complexity 1 33 0 813 138 14 179 chr20 5681967 5682191 -60985814 + Charlie5 DNA MER1_type 2337 2502 -83 1495 186 4 4 chr20 5682191 5682438 -60985567 + AluJb SINE Alu 1 247 -65 813 138 14 179 chr20 5682438 5682510 -60985495 + Charlie5 DNA MER1_type 2502 2584 -1 591 268 71 20 chr20 5682514 5682768 -60985237 - L2 LINE L2 -2961 353 87 907 236 43 40 chr20 5682845 5682924 -60985081 - L2 LINE L2 -775 2539 2462 2489 88 0 0 chr20 5682924 5683232 -60984773 + AluSx SINE Alu 1 308 -4 907 236 43 40 chr20 5683232 5683500 -60984505 - L2 LINE L2 -852 2462 2191 523 183 77 0 chr20 5684244 5684348 -60983657 + FLAM_C SINE Alu 7 118 -25 36 40 0 0 chr20 5684348 5684398 -60983607 + AT_rich Low_complexity Low_complexity 1 50 0 347 284 20 10 chr20 5684463 5684565 -60983440 - MIR SINE MIR -63 145 43 192 125 0 0 chr20 5684570 5684602 -60983403 + (T)n Simple_repeat Simple_repeat 1 32 0 308 250 160 56 chr20 5684615 5684759 -60983246 - L1MC5 LINE L1 -48 7913 7755 270 205 13 93 chr20 5684811 5684962 -60983043 - L1MC5 LINE L1 -195 7766 7628 1184 110 29 131 chr20 5684977 5685222 -60982783 - AluYb8 SINE Alu -15 303 84 755 219 35 42 chr20 5685250 5685538 -60982467 - L1MC5 LINE L1 -366 7595 7310 349 293 23 38 chr20 5685677 5685870 -60982135 - L1MC4 LINE L1 -725 7236 7068 1722 181 13 10 chr20 5685870 5686174 -60981831 + AluJb SINE Alu 2 306 -6 265 187 27 13 chr20 5686179 5686254 -60981751 + GA-rich Low_complexity Low_complexity 3 78 0 642 227 50 69 chr20 5686255 5686572 -60981433 - L1MC5 LINE L1 -887 7074 6764 2202 106 0 26 chr20 5686698 5687000 -60981005 + AluSg SINE Alu 1 294 -16 1754 166 0 7 chr20 5687012 5687295 -60980710 + AluJb SINE Alu 1 281 -31 327 169 17 0 chr20 5687867 5687926 -60980079 + FRAM/FAM SINE Alu 1 59 -107 2952 180 98 52 chr20 5688092 5688787 -60979218 + LTR8A LTR ERV1 1 727 0 2034 128 51 0 chr20 5689052 5689348 -60978657 - AluSx SINE Alu -1 311 1 1886 207 111 47 chr20 5689349 5689484 -60978521 - L1MC/D LINE L1 -743 5403 5278 904 153 70 13 chr20 5689484 5689641 -60978364 - FRAM SINE Alu 0 166 1 1886 207 111 47 chr20 5689641 5689716 -60978289 - L1MC/D LINE L1 -868 5278 5209 1986 157 7 0 chr20 5689716 5690015 -60977990 - AluJb SINE Alu -11 301 1 1886 207 111 47 chr20 5690015 5690171 -60977834 - L1MC/D LINE L1 -937 5209 5064 1361 192 130 0 chr20 5690171 5690432 -60977573 - AluJo SINE Alu -7 295 1 1886 207 111 47 chr20 5690432 5690544 -60977461 - L1MC/D LINE L1 -1082 5064 4961 2324 99 24 0 chr20 5690544 5690838 -60977167 - AluSx SINE Alu -11 301 1 1886 207 111 47 chr20 5690838 5691108 -60976897 - L1MC/D LINE L1 -1185 4961 4642 1964 76 44 0 chr20 5691116 5691365 -60976640 - AluSq SINE Alu -53 260 1 34 42 0 0 chr20 5691450 5691498 -60976507 + AT_rich Low_complexity Low_complexity 1 48 0 434 238 20 79 chr20 5691555 5691757 -60976248 - L2 LINE L2 -893 2421 2232 219 238 25 50 chr20 5693036 5693116 -60974889 - L2 LINE L2 -68 3245 3168 226 333 49 0 chr20 5693828 5693909 -60974096 - L2 LINE L2 -50 3263 3179 25 31 0 0 chr20 5695950 5695982 -60972023 + AT_rich Low_complexity Low_complexity 1 32 0 552 284 47 43 chr20 5697110 5697342 -60970663 + HAL1 LINE L1 1 233 -2274 643 152 24 32 chr20 5698194 5698319 -60969686 + AluJb SINE Alu 182 305 -7 1687 239 144 55 chr20 5698322 5698458 -60969547 + HAL1 LINE L1 971 1094 -1413 1902 141 10 13 chr20 5698458 5698771 -60969234 + AluSx SINE Alu 1 312 0 1687 239 144 55 chr20 5698771 5699469 -60968536 + HAL1 LINE L1 1094 1879 -628 351 296 77 6 chr20 5699969 5700138 -60967867 + L1ME3A LINE L1 5690 5870 -300 236 94 0 0 chr20 5700187 5700219 -60967786 + Alu SINE Alu 179 210 -89 679 101 119 0 chr20 5700221 5700330 -60967675 + AluSg/x SINE Alu 177 298 -14 414 256 68 46 chr20 5700504 5700723 -60967282 + HAL1 LINE L1 2284 2507 0 27 0 0 0 chr20 5701189 5701216 -60966789 + AT_rich Low_complexity Low_complexity 1 27 0 31 26 0 0 chr20 5701520 5701558 -60966447 + AT_rich Low_complexity Low_complexity 1 38 0 310 133 0 0 chr20 5701571 5701616 -60966389 - Alu SINE Alu -258 45 1 9573 128 57 22 chr20 5701616 5702515 -60965490 + Tigger1 DNA MER2_type 35 901 -1517 2303 78 14 0 chr20 5702515 5702682 -60965323 - AluY SINE Alu -11 300 126 189 0 0 0 chr20 5702682 5702703 -60965302 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2303 78 14 0 chr20 5702703 5702831 -60965174 - AluY SINE Alu -185 126 1 9573 128 57 22 chr20 5702831 5703806 -60964199 + Tigger1 DNA MER2_type 901 1840 -578 2129 123 10 3 chr20 5703806 5704114 -60963891 + AluSx SINE Alu 1 310 -2 1944 125 30 20 chr20 5704122 5704425 -60963580 + AluSq SINE Alu 1 306 -7 9573 128 57 22 chr20 5704425 5704765 -60963240 + Tigger1 DNA MER2_type 1846 2324 -94 2337 80 7 0 chr20 5704765 5705051 -60962954 - AluSg SINE Alu -22 288 1 9573 128 57 22 chr20 5705051 5705150 -60962855 + Tigger1 DNA MER2_type 2324 2418 0 416 223 92 159 chr20 5705279 5705593 -60962412 - L2 LINE L2 -4 3309 3017 1127 295 120 13 chr20 5705618 5706240 -60961765 - L2 LINE L2 -410 2904 2137 304 276 38 48 chr20 5706249 5706354 -60961651 - MER5B DNA MER1_type -69 109 6 1940 142 6 22 chr20 5707468 5707784 -60960221 + AluSx SINE Alu 1 311 -1 1496 192 37 0 chr20 5707859 5708130 -60959875 + AluJb SINE Alu 7 287 -25 28 48 0 0 chr20 5708131 5708173 -60959832 + AT_rich Low_complexity Low_complexity 1 42 0 395 246 80 45 chr20 5708710 5708843 -60959162 - MIR3 SINE MIR -30 178 41 523 274 22 22 chr20 5709396 5709575 -60958430 + L2 LINE L2 3135 3313 0 2011 123 7 3 chr20 5710843 5711128 -60956877 - AluSx SINE Alu -25 287 2 242 393 0 0 chr20 5711221 5711305 -60956700 + MIR3 SINE MIR 5 88 -120 2435 64 10 0 chr20 5711530 5711826 -60956179 - AluY SINE Alu -12 299 1 930 211 0 0 chr20 5712052 5712223 -60955782 - AluJb SINE Alu -8 304 134 1320 183 11 53 chr20 5713093 5713378 -60954627 + AluJb SINE Alu 1 273 -39 186 71 0 0 chr20 5713382 5713410 -60954595 + (CA)n Simple_repeat Simple_repeat 1 28 0 1503 189 17 36 chr20 5713775 5714076 -60953929 - AluJo SINE Alu -17 295 1 256 326 136 0 chr20 5714696 5714828 -60953177 - L2 LINE L2 -17 3296 3147 180 243 86 57 chr20 5714923 5714993 -60953012 - MIR SINE MIR -161 101 30 255 152 0 0 chr20 5716110 5716156 -60951849 + A-rich Low_complexity Low_complexity 1 46 0 194 61 0 30 chr20 5716778 5716811 -60951194 + (TA)n Simple_repeat Simple_repeat 1 32 0 1939 112 18 28 chr20 5717170 5717475 -60950530 + AluSx SINE Alu 1 302 0 244 155 17 17 chr20 5717628 5717686 -60950319 + CT-rich Low_complexity Low_complexity 2 59 0 24 32 0 0 chr20 5718600 5718631 -60949374 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr20 5718974 5718995 -60949010 + (A)n Simple_repeat Simple_repeat 1 21 0 222 37 0 0 chr20 5719460 5719487 -60948518 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 2207 125 0 0 chr20 5720174 5720470 -60947535 + AluSx SINE Alu 1 296 -16 1758 171 4 0 chr20 5720490 5720753 -60947252 + AluJo SINE Alu 6 269 -43 469 218 45 26 chr20 5720914 5721070 -60946935 - MER104 DNA Tc2 -13 167 9 906 177 6 29 chr20 5721412 5721587 -60946418 - FRAM SINE Alu -9 167 1 2067 137 0 13 chr20 5721626 5721933 -60946072 - AluSx SINE Alu -9 303 1 1398 153 4 37 chr20 5722063 5722305 -60945700 + AluJb SINE Alu 63 296 -16 1740 157 14 10 chr20 5723008 5723301 -60944704 + AluJb SINE Alu 9 302 -10 275 217 61 6 chr20 5723596 5723676 -60944329 - MIR3 SINE MIR -35 173 88 324 102 0 0 chr20 5724574 5724623 -60943382 + (CA)n Simple_repeat Simple_repeat 2 50 0 21 36 0 0 chr20 5724645 5724673 -60943332 + AT_rich Low_complexity Low_complexity 1 28 0 2128 133 0 3 chr20 5724686 5724988 -60943017 + AluSg SINE Alu 1 301 -9 22 0 0 0 chr20 5725128 5725150 -60942855 + AT_rich Low_complexity Low_complexity 1 22 0 792 126 31 0 chr20 5725470 5725597 -60942408 + AluJ SINE Alu 1 131 -171 1509 88 0 0 chr20 5725601 5725793 -60942212 - AluSg SINE Alu -1 311 120 592 67 0 0 chr20 5725793 5725868 -60942137 - AluSg SINE Alu -234 75 1 1152 176 0 0 chr20 5725883 5726065 -60941940 + AluJ SINE Alu 131 312 0 24 60 0 30 chr20 5727429 5727454 -60940551 + AT_rich Low_complexity Low_complexity 1 25 -40 1877 149 14 0 chr20 5727454 5727743 -60940262 + AluJb SINE Alu 1 293 -19 24 60 0 30 chr20 5727743 5727784 -60940221 + AT_rich Low_complexity Low_complexity 25 65 0 2133 95 28 0 chr20 5727907 5728191 -60939814 - AluSx SINE Alu -16 296 5 355 82 0 0 chr20 5728192 5728241 -60939764 - Alu SINE Alu -250 50 2 2484 65 0 3 chr20 5728991 5729301 -60938704 + AluY SINE Alu 1 309 -2 1955 120 17 30 chr20 5729425 5729725 -60938280 - AluSx SINE Alu -16 296 1 297 0 0 0 chr20 5730362 5730395 -60937610 + (T)n Simple_repeat Simple_repeat 1 33 0 2813 3 0 10 chr20 5730450 5730764 -60937241 + AluY SINE Alu 1 311 0 2213 138 0 0 chr20 5731154 5731459 -60936546 + AluSx SINE Alu 1 305 -7 2169 94 37 3 chr20 5731500 5731799 -60936206 + AluSp SINE Alu 1 309 -4 1796 129 8 15 chr20 5731811 5732074 -60935931 + AluSq SINE Alu 1 261 -52 395 179 15 0 chr20 5732560 5732627 -60935378 - Tigger3(Golem) DNA MER2_type -1 3028 2961 501 220 0 0 chr20 5732641 5732732 -60935273 - Tigger3(Golem) DNA MER2_type -2938 91 1 204 97 0 0 chr20 5734162 5734193 -60933812 + (A)n Simple_repeat Simple_repeat 1 31 0 253 240 10 50 chr20 5735799 5735899 -60932106 - L1ME4a LINE L1 -59 6062 5967 2161 121 3 0 chr20 5735923 5736213 -60931792 - AluSg SINE Alu -19 291 1 2061 138 0 0 chr20 5736770 5737060 -60930945 + AluSx SINE Alu 1 290 -22 2312 113 0 0 chr20 5737092 5737401 -60930604 + AluSx SINE Alu 3 311 -1 2207 97 38 0 chr20 5737877 5738166 -60929839 + AluSp SINE Alu 1 300 -13 22 35 0 0 chr20 5738514 5738543 -60929462 + AT_rich Low_complexity Low_complexity 1 29 0 2172 108 3 10 chr20 5738806 5739101 -60928904 + AluSx SINE Alu 1 293 -19 353 298 43 0 chr20 5739913 5740007 -60927998 - MIR3 SINE MIR -30 178 81 222 289 126 15 chr20 5742067 5742202 -60925803 - L2 LINE L2 0 3313 3164 267 358 22 37 chr20 5742241 5742375 -60925630 - L2 LINE L2 -221 3051 2920 783 175 69 74 chr20 5742694 5742843 -60925162 + MER5A DNA MER1_type 2 151 -38 2236 84 3 14 chr20 5742843 5743139 -60924866 - AluY SINE Alu -18 293 1 783 175 69 74 chr20 5743139 5743178 -60924827 + MER5A DNA MER1_type 151 189 0 1194 151 34 0 chr20 5743298 5743504 -60924501 + Tigger1 DNA MER2_type 1 213 -2205 * 1482 138 20 0 chr20 5743502 5743748 -60924257 + Tigger1 DNA MER2_type 2003 2253 -165 601 62 0 0 chr20 5743764 5743876 -60924129 + L1PA6 LINE L1 6062 6173 0 2247 120 0 0 chr20 5743909 5744218 -60923787 + AluSg SINE Alu 2 310 0 416 288 46 20 chr20 5744429 5744582 -60923423 + MER5B DNA MER1_type 21 177 -1 1230 211 63 25 chr20 5744674 5744958 -60923047 + AluJo SINE Alu 3 297 -15 265 200 38 38 chr20 5745864 5745944 -60922061 - MER5C DNA MER1_type 0 324 245 469 229 8 34 chr20 5745993 5746111 -60921894 - MER5C DNA MER1_type -201 123 9 299 261 92 25 chr20 5746248 5746367 -60921638 - MIR3 SINE MIR -46 162 36 358 153 22 97 chr20 5746650 5746744 -60921261 + AluJo SINE Alu 48 125 -177 987 157 6 18 chr20 5746786 5746952 -60921053 + AluJo SINE Alu 118 281 -31 350 277 107 44 chr20 5746969 5747175 -60920830 + HAL1 LINE L1 2285 2503 -4 379 123 0 0 chr20 5747815 5747872 -60920133 + AluS SINE Alu 1 57 -244 1049 143 0 6 chr20 5747872 5748033 -60919972 + AluSg/x SINE Alu 140 299 -11 2078 126 7 0 chr20 5748114 5748400 -60919605 - AluSx SINE Alu -24 288 1 1686 127 3 121 chr20 5748821 5748953 -60919052 + AluSx SINE Alu 1 72 -230 1863 138 3 49 chr20 5748953 5749099 -60918906 + AluSx SINE Alu 1 127 -185 2229 97 14 0 chr20 5749099 5749388 -60918617 + AluSg SINE Alu 1 293 -17 1863 138 3 49 chr20 5749388 5749545 -60918460 + AluSx SINE Alu 127 290 -22 1686 127 3 121 chr20 5749545 5749742 -60918263 + AluSx SINE Alu 72 291 -11 788 197 56 0 chr20 5749762 5749904 -60918101 + FRAM SINE Alu 1 143 -33 2419 108 0 0 chr20 5749909 5750216 -60917789 - AluSx SINE Alu -5 307 1 331 283 177 79 chr20 5751146 5751243 -60916762 - L2 LINE L2 0 3272 3186 1976 154 0 22 chr20 5751243 5751554 -60916451 + AluSx SINE Alu 1 304 -8 2114 114 3 7 chr20 5751559 5751849 -60916156 + AluSg SINE Alu 1 289 -21 331 283 177 79 chr20 5751849 5752113 -60915892 - L2 LINE L2 -89 3183 2869 2453 92 0 0 chr20 5752291 5752594 -60915411 - AluSx SINE Alu -9 303 1 1370 196 76 11 chr20 5753207 5753322 -60914683 + AluJb SINE Alu 3 109 -203 288 0 0 0 chr20 5753322 5753354 -60914651 + (CA)n Simple_repeat Simple_repeat 2 33 0 1370 196 76 11 chr20 5753354 5753513 -60914492 + AluJb SINE Alu 109 295 -17 720 194 0 0 chr20 5753395 5753519 -60914486 + AluJb SINE Alu 178 301 -11 1803 84 9 0 chr20 5754047 5754274 -60913731 + AluSp SINE Alu 3 231 -82 931 209 65 10 chr20 5755100 5755301 -60912704 + MER20 DNA MER1_type 1 212 -7 2116 131 0 0 chr20 5755552 5755858 -60912147 + AluSx SINE Alu 1 306 -6 2039 107 45 0 chr20 5755858 5756148 -60911857 + AluSg SINE Alu 1 303 -7 929 155 37 0 chr20 5756225 5756386 -60911619 + AluSg/x SINE Alu 137 303 -9 227 211 47 47 chr20 5759252 5759380 -60908625 + (CCCGG)n Simple_repeat Simple_repeat 2 129 0 24 53 0 0 chr20 5759583 5759621 -60908384 + GC_rich Low_complexity Low_complexity 1 38 0 2308 54 14 3 chr20 5759848 5760142 -60907863 + AluSx SINE Alu 1 297 -15 225 202 155 24 chr20 5760334 5760418 -60907587 + MER5A DNA MER1_type 11 105 -84 2159 82 0 0 chr20 5760632 5760936 -60907069 + AluSc SINE Alu 2 305 0 1757 145 20 0 chr20 5761064 5761368 -60906637 + AluSx SINE Alu 1 310 -2 193 204 68 23 chr20 5761591 5761635 -60906370 - L2 LINE L2 -2 3311 3266 2226 90 3 28 chr20 5761844 5762165 -60905840 - AluSq SINE Alu 0 313 1 1450 103 70 0 chr20 5762337 5762551 -60905454 + MER30 DNA MER1_type 2 230 0 1942 130 0 7 chr20 5762599 5762898 -60905107 + AluSc SINE Alu 1 297 -12 1567 176 19 32 chr20 5763116 5763429 -60904576 - AluJb SINE Alu -3 309 1 234 189 0 0 chr20 5763638 5763675 -60904330 + MER57A LTR ERV1 303 339 -64 789 216 9 69 chr20 5763703 5763752 -60904253 + AluJb SINE Alu 82 132 -180 252 0 0 0 chr20 5763752 5763780 -60904225 + (TA)n Simple_repeat Simple_repeat 2 29 0 789 216 9 69 chr20 5763780 5763961 -60904044 + AluJb SINE Alu 132 298 -14 1848 155 0 0 chr20 5764042 5764333 -60903672 - AluSx SINE Alu -21 291 1 432 51 0 0 chr20 5764383 5764442 -60903563 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1735 169 3 0 chr20 5764442 5764726 -60903279 - AluSx SINE Alu -27 285 1 335 195 143 39 chr20 5764744 5764790 -60903215 - AluJo SINE Alu -129 173 133 339 25 0 0 chr20 5764790 5764830 -60903175 + (TG)n Simple_repeat Simple_repeat 2 41 0 335 195 143 39 chr20 5764830 5764860 -60903145 - AluJo SINE Alu -169 133 89 1647 141 72 4 chr20 5764872 5765149 -60902856 - AluJb SINE Alu -16 296 1 2333 71 3 0 chr20 5765397 5765693 -60902312 + AluSp SINE Alu 1 297 -16 2108 103 14 0 chr20 5765779 5766071 -60901934 - AluSg SINE Alu -14 296 1 2367 80 3 0 chr20 5766614 5766926 -60901079 + AluSp SINE Alu 1 313 0 1452 199 7 14 chr20 5767181 5767492 -60900513 + AluSx SINE Alu 1 309 0 1553 205 3 3 chr20 5767493 5767796 -60900209 + AluJb SINE Alu 1 303 -9 1186 188 33 0 chr20 5767799 5768012 -60899993 - LTR8A LTR ERV1 -349 378 159 233 211 0 0 chr20 5768037 5768089 -60899916 + AluJ/monomer SINE Alu 250 301 -1 2170 98 3 13 chr20 5768109 5768424 -60899581 - AluSx SINE Alu 0 312 1 2146 117 3 0 chr20 5768424 5768731 -60899274 - AluSx SINE Alu -3 309 1 1981 129 3 0 chr20 5768781 5769068 -60898937 - AluSx SINE Alu -24 288 1 965 86 0 0 chr20 5769129 5769268 -60898737 - Alu SINE Alu 0 311 173 2270 95 0 3 chr20 5769328 5769632 -60898373 + AluSx SINE Alu 2 304 -8 207 0 0 0 chr20 5770268 5770291 -60897714 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2110 110 7 0 chr20 5770300 5770591 -60897414 - AluSp SINE Alu -20 293 1 182 206 159 48 chr20 5770593 5770656 -60897349 + L2 LINE L2 3171 3240 -32 2466 44 0 0 chr20 5770803 5771101 -60896904 + AluY SINE Alu 1 298 -13 1700 158 0 31 chr20 5771519 5771836 -60896169 + AluJb SINE Alu 6 312 0 953 161 0 6 chr20 5771927 5772088 -60895917 - AluJo SINE Alu -135 177 18 2004 144 0 0 chr20 5772188 5772494 -60895511 + AluSx SINE Alu 1 306 -6 851 199 0 119 chr20 5772595 5772831 -60895174 + AluSx SINE Alu 5 212 -100 1317 121 0 0 chr20 5772913 5773095 -60894910 + AluSg/x SINE Alu 99 280 -32 189 0 0 0 chr20 5773095 5773116 -60894889 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 4528 105 38 31 chr20 5773140 5773302 -60894703 - LTR8 LTR ERV1 0 691 532 2014 109 10 23 chr20 5773302 5773606 -60894399 - AluSx SINE Alu -12 300 1 4528 105 38 31 chr20 5773606 5774129 -60893876 - LTR8 LTR ERV1 -159 532 1 2298 88 0 0 chr20 5774209 5774514 -60893491 + AluSq SINE Alu 1 305 -8 1657 180 30 10 chr20 5774522 5774827 -60893178 + AluJb SINE Alu 1 311 -1 2173 201 89 99 chr20 5775127 5775962 -60892043 + LTR1B LTR ERV1 1 826 0 23 0 0 0 chr20 5776561 5776584 -60891421 + AT_rich Low_complexity Low_complexity 1 23 0 1698 157 10 10 chr20 5776625 5776937 -60891068 - AluSx SINE Alu 0 312 1 1557 173 3 32 chr20 5776987 5777132 -60890873 + AluJo SINE Alu 1 149 -163 1912 118 3 14 chr20 5777132 5777421 -60890584 + AluSx SINE Alu 21 306 -6 1557 173 3 32 chr20 5777421 5777588 -60890417 + AluJo SINE Alu 149 304 -8 402 275 42 35 chr20 5777783 5777848 -60890157 - MIR SINE MIR -28 234 171 2215 84 0 0 chr20 5777848 5778182 -60889823 - AluSx SINE Alu 0 334 1 402 275 42 35 chr20 5778182 5778257 -60889748 - MIR SINE MIR -91 171 92 269 343 95 0 chr20 5778265 5778370 -60889635 + MIR SINE MIR 78 192 -70 396 284 106 21 chr20 5778519 5778660 -60889345 - MER63 DNA MER1_type -275 787 9 1907 115 43 0 chr20 5779019 5779298 -60888707 - AluSx SINE Alu -21 291 1 1156 164 0 36 chr20 5779429 5779648 -60888357 + AluJb SINE Alu 1 211 -101 1025 132 102 0 chr20 5779648 5779815 -60888190 - LTR8 LTR ERV1 0 691 508 730 179 0 0 chr20 5779816 5779933 -60888072 + AluSq/x SINE Alu 3 119 -193 509 132 26 0 chr20 5779941 5780017 -60887988 + AluY SINE Alu 94 171 -140 1438 206 45 94 chr20 5780056 5780358 -60887647 - MLT1C LTR MaLR -61 406 130 1855 114 0 117 chr20 5780358 5780563 -60887442 - AluSx SINE Alu 0 302 151 2081 96 4 0 chr20 5780563 5780843 -60887162 - AluSp SINE Alu -32 281 1 1855 114 0 117 chr20 5780843 5780979 -60887026 - AluSx SINE Alu -151 151 1 1438 206 45 94 chr20 5780979 5781103 -60886902 - MLT1C LTR MaLR -337 130 1 1175 194 116 8 chr20 5781328 5781596 -60886409 - AluSg SINE Alu 0 310 14 2160 105 0 3 chr20 5781767 5782063 -60885942 + AluSg1 SINE Alu 1 295 -14 1391 152 152 37 chr20 5782117 5782386 -60885619 - AluJo SINE Alu 0 302 3 2090 120 0 0 chr20 5782435 5782736 -60885269 + AluSp SINE Alu 1 301 -12 2795 178 61 20 chr20 5783078 5783616 -60884389 - MER21A LTR ERV1 0 931 372 2562 103 15 29 chr20 5783630 5784065 -60883940 + MER41A LTR ERV1 1 470 -165 906 165 11 11 chr20 5784066 5784242 -60883763 + AluSg/x SINE Alu 137 312 0 2139 94 7 0 chr20 5784258 5784545 -60883460 + AluSp SINE Alu 1 289 -24 843 122 157 0 chr20 5784557 5784704 -60883301 + MER41A LTR ERV1 385 554 0 927 161 11 0 chr20 5784796 5784970 -60883035 + AluY SINE Alu 136 311 0 1388 169 4 34 chr20 5785027 5785293 -60882712 + AluJb SINE Alu 36 293 -19 2345 100 91 0 chr20 5785314 5785675 -60882330 - MER39B LTR ERV1 0 653 260 1426 180 6 55 chr20 5785692 5785763 -60882242 - AluSx SINE Alu 0 312 239 2230 100 0 0 chr20 5785763 5786063 -60881942 - AluSc SINE Alu -9 300 1 1426 180 6 55 chr20 5786063 5786319 -60881686 - AluSx SINE Alu -73 239 1 801 149 25 0 chr20 5786331 5786452 -60881553 - FLAM_C SINE Alu -18 125 2 213 376 80 0 chr20 5786498 5786623 -60881382 + L2 LINE L2 1086 1220 -2094 565 203 156 26 chr20 5786673 5786865 -60881140 - MLT1F1 LTR MaLR -8 559 343 273 57 0 0 chr20 5786865 5786900 -60881105 + (TCC)n Simple_repeat Simple_repeat 3 37 0 1471 150 24 55 chr20 5786919 5787212 -60880793 - AluJo SINE Alu -28 284 1 10466 51 9 12 chr20 5787224 5788604 -60879401 - SVA Other Other -9 1377 2 303 327 115 26 chr20 5788651 5788807 -60879198 - MLT1F1 LTR MaLR -214 376 207 2004 129 0 3 chr20 5788957 5789252 -60878753 - AluSx SINE Alu -18 294 1 2039 117 7 0 chr20 5789252 5789550 -60878455 - AluSx SINE Alu -12 300 1 2214 209 93 9 chr20 5789761 5790224 -60877781 - MLT1F LTR MaLR 0 542 41 855 153 0 7 chr20 5790279 5790416 -60877589 + AluJb SINE Alu 1 136 -176 1927 126 34 0 chr20 5790434 5790727 -60877278 + AluSx SINE Alu 1 303 -9 626 260 104 24 chr20 5791396 5791646 -60876359 + L2 LINE L2 1851 2120 -1194 648 210 0 8 chr20 5791656 5791775 -60876230 + AluSq/x SINE Alu 2 119 -193 1969 141 3 0 chr20 5791775 5792080 -60875925 - AluSx SINE Alu -6 306 1 1555 137 133 0 chr20 5792148 5792419 -60875586 - AluSx SINE Alu -5 307 1 885 284 177 28 chr20 5792481 5793038 -60874967 + L2 LINE L2 2144 2860 -453 2109 117 3 0 chr20 5793038 5793345 -60874660 + AluSx SINE Alu 1 308 -4 885 284 177 28 chr20 5793345 5793593 -60874412 + L2 LINE L2 2860 3070 -243 1008 183 0 0 chr20 5793827 5793996 -60874009 + AluJb SINE Alu 121 289 -23 1226 128 0 15 chr20 5794658 5794885 -60873120 - AluSg/x SINE Alu 0 306 83 606 110 12 0 chr20 5794885 5794967 -60873038 - AluSp/q SINE Alu -63 250 168 930 69 0 42 chr20 5794967 5795111 -60872894 + AluSp/q SINE Alu 176 313 0 1540 178 31 0 chr20 5795214 5795501 -60872504 + AluJb SINE Alu 1 296 -16 1980 122 3 0 chr20 5795522 5795816 -60872189 + AluY SINE Alu 1 295 -16 2239 78 3 16 chr20 5796266 5796575 -60871430 + AluSq SINE Alu 1 305 -8 267 273 0 0 chr20 5796831 5796897 -60871108 - MIR3 SINE MIR -18 190 125 1846 162 0 0 chr20 5796901 5797203 -60870802 + AluSx SINE Alu 1 302 -10 2078 122 0 0 chr20 5797214 5797546 -60870459 - AluSg SINE Alu 0 332 1 1356 157 0 8 chr20 5797571 5797807 -60870198 - AluJb SINE Alu -9 303 70 2238 102 0 0 chr20 5797901 5798205 -60869800 - AluSq SINE Alu -9 304 1 2047 85 3 21 chr20 5798241 5798546 -60869459 + AluSg SINE Alu 5 304 0 191 172 35 0 chr20 5798576 5798591 -60869414 + GA-rich Low_complexity Low_complexity 1 14 -46 1540 164 64 20 chr20 5798591 5798889 -60869116 + AluJb SINE Alu 1 311 -1 191 172 35 0 chr20 5798889 5798931 -60869074 + GA-rich Low_complexity Low_complexity 14 60 0 1736 106 75 0 chr20 5799334 5799589 -60868416 - AluSg SINE Alu -28 282 9 2138 102 0 0 chr20 5799602 5799919 -60868086 - AluSx SINE Alu 0 317 1 213 222 0 19 chr20 5799986 5800040 -60867965 - MIR SINE MIR -56 152 100 3989 93 15 99 chr20 5800175 5800860 -60867145 + MER4A LTR ERV1 1 627 -37 2032 138 0 0 chr20 5800860 5801158 -60866847 - AluSx SINE Alu -14 298 1 2086 130 3 0 chr20 5801503 5801811 -60866194 + AluSx SINE Alu 1 309 -3 2075 109 0 7 chr20 5802180 5802473 -60865532 - AluSx SINE Alu -19 293 3 2269 64 3 10 chr20 5802668 5802966 -60865039 - AluY SINE Alu -15 296 1 243 0 0 0 chr20 5803148 5803175 -60864830 + (TG)n Simple_repeat Simple_repeat 2 28 0 338 200 71 0 chr20 5803358 5803428 -60864577 + MIR SINE MIR 136 210 -52 2162 102 3 0 chr20 5803548 5803841 -60864164 - AluSc SINE Alu -15 294 1 1390 160 8 23 chr20 5803871 5804127 -60863878 + AluJo SINE Alu 35 286 -26 1904 114 25 89 chr20 5804341 5804656 -60863349 + AluJb SINE Alu 1 295 -17 337 241 190 26 chr20 5804661 5804777 -60863228 - MIR SINE MIR -10 252 118 256 235 111 12 chr20 5804779 5804860 -60863145 - MLT1K LTR MaLR -48 540 452 2501 44 7 3 chr20 5805036 5805333 -60862672 - AluY SINE Alu -9 302 5 809 275 95 64 chr20 5805533 5805955 -60862050 - LTR16A LTR ERVL 0 450 16 1883 160 0 0 chr20 5806610 5806742 -60861263 + AluJo SINE Alu 1 132 -180 1798 129 39 25 chr20 5806742 5807022 -60860983 + AluSx SINE Alu 15 298 -14 1883 160 0 0 chr20 5807022 5807176 -60860829 + AluJo SINE Alu 131 287 -25 631 248 0 35 chr20 5807241 5807382 -60860623 + AluJo SINE Alu 2 137 -175 527 148 0 87 chr20 5807378 5807493 -60860512 + FLAM_C SINE Alu 39 143 0 * 250 105 0 0 chr20 5808442 5808480 -60859525 - AluSp/q SINE Alu -43 260 223 255 184 0 0 chr20 5808510 5808559 -60859446 + L1MC5 LINE L1 7843 7891 -70 2418 97 3 0 chr20 5808591 5808901 -60859104 + AluSx SINE Alu 1 311 -1 258 298 103 101 chr20 5808904 5809278 -60858727 - L2 LINE L2 -198 3074 2691 2066 127 20 0 chr20 5809329 5809621 -60858384 + AluSx SINE Alu 1 298 -14 2583 130 30 39 chr20 5809629 5810091 -60857914 + L1PB4 LINE L1 5581 6038 -118 1944 150 0 14 chr20 5810093 5810379 -60857626 + AluJo SINE Alu 1 282 -30 2400 75 24 0 chr20 5810381 5810674 -60857331 - AluY SINE Alu -11 300 1 985 193 0 16 chr20 5810734 5810746 -60857259 + AluJo SINE Alu 120 131 -181 763 152 8 0 chr20 5810746 5810871 -60857134 + L1PB4 LINE L1 6031 6156 0 2341 91 10 0 chr20 5810874 5811170 -60856835 + AluSg SINE Alu 1 299 -11 985 193 0 16 chr20 5811170 5811340 -60856665 + AluJo SINE Alu 133 303 -9 1030 233 24 51 chr20 5811433 5811725 -60856280 + MLT1B LTR MaLR 107 390 0 1051 133 0 0 chr20 5812214 5812364 -60855641 + AluSp/q SINE Alu 157 306 -7 1284 163 124 35 chr20 5812506 5812618 -60855387 + AluSq SINE Alu 1 102 -211 279 0 0 0 chr20 5812618 5812649 -60855356 + (TC)n Simple_repeat Simple_repeat 2 32 0 1284 163 124 35 chr20 5812649 5812818 -60855187 + AluSq SINE Alu 102 307 -6 810 184 5 81 chr20 5812822 5813007 -60854998 + FRAM SINE Alu 1 171 -5 2194 125 0 19 chr20 5813233 5813546 -60854459 - AluSx SINE Alu -3 309 3 1866 175 0 20 chr20 5813550 5813853 -60854152 - AluJb SINE Alu -15 297 1 2253 79 0 4 chr20 5814444 5814721 -60853284 + AluSc SINE Alu 1 276 -33 2494 57 0 7 chr20 5815197 5815496 -60852509 - AluY SINE Alu -14 297 1 273 222 11 67 chr20 5815853 5815943 -60852062 - MLT1H LTR MaLR -60 489 405 719 250 10 47 chr20 5815946 5816138 -60851867 + MLT1E2 LTR MaLR 2 186 -440 538 181 0 0 chr20 5816142 5816225 -60851780 + FLAM_C SINE Alu 36 118 -25 882 211 64 18 chr20 5816226 5816444 -60851561 + MLT1E2 LTR MaLR 232 459 -167 1484 180 87 0 chr20 5816446 5816847 -60851158 - L1M3 LINE L1 -736 5447 5025 241 321 28 0 chr20 5816930 5817039 -60850966 + MLT1H LTR MaLR 33 144 -405 816 291 44 7 chr20 5817056 5817331 -60850674 + MLT1H LTR MaLR 119 403 -146 1078 234 103 0 chr20 5817442 5817724 -60850281 - L2 LINE L2 -661 2653 2343 587 178 0 54 chr20 5818378 5818507 -60849498 + AluSg/x SINE Alu 181 302 -7 2622 58 0 3 chr20 5819122 5819431 -60848574 + AluY SINE Alu 2 309 -2 180 0 0 0 chr20 5819771 5819791 -60848214 + (TGG)n Simple_repeat Simple_repeat 1 20 0 2121 119 14 0 chr20 5819791 5820076 -60847929 - AluSx SINE Alu -23 289 1 2528 61 0 3 chr20 5820179 5820476 -60847529 - AluY SINE Alu -15 296 1 2229 103 3 7 chr20 5820512 5820829 -60847176 + AluSp SINE Alu 1 313 0 1741 150 58 69 chr20 5820836 5821215 -60846790 - THE1C LTR MaLR 0 375 1 2290 64 0 3 chr20 5821222 5821633 -60846372 - AluY SINE Alu 0 410 1 358 227 47 16 chr20 5821684 5821812 -60846193 + L1ME4a LINE L1 5969 6100 -21 1771 176 17 10 chr20 5822029 5822331 -60845674 - AluJo SINE Alu -8 304 1 204 273 0 0 chr20 5822351 5822395 -60845610 + (TA)n Simple_repeat Simple_repeat 1 44 0 449 304 47 77 chr20 5822404 5822977 -60845028 + L1MC4a LINE L1 5293 5848 -1960 625 289 0 60 chr20 5823017 5823185 -60844820 + MIR SINE MIR 44 198 -64 1929 166 3 13 chr20 5823185 5823492 -60844513 - AluJb SINE Alu -8 304 1 625 289 0 60 chr20 5823492 5823541 -60844464 + MIR SINE MIR 198 248 -14 303 315 63 35 chr20 5823556 5823699 -60844306 + L1ME4a LINE L1 5869 6015 -106 276 149 0 0 chr20 5823825 5823872 -60844133 + (CA)n Simple_repeat Simple_repeat 1 47 0 1333 187 26 37 chr20 5824265 5824533 -60843472 - AluJo SINE Alu -47 265 1 22 0 0 0 chr20 5824698 5824720 -60843285 + AT_rich Low_complexity Low_complexity 1 22 0 2214 127 0 13 chr20 5824720 5825036 -60842969 + AluSx SINE Alu 1 312 0 27 29 0 0 chr20 5825121 5825155 -60842850 + AT_rich Low_complexity Low_complexity 1 34 0 2186 119 0 0 chr20 5825157 5825450 -60842555 + AluSx SINE Alu 1 293 -19 853 144 0 43 chr20 5825605 5825744 -60842261 - FLAM_C SINE Alu 0 133 1 652 274 82 32 chr20 5825784 5826216 -60841789 - LTR33 LTR ERVL 0 521 29 2214 123 3 0 chr20 5826305 5826605 -60841400 - AluSq SINE Alu -12 301 1 439 258 33 38 chr20 5826723 5826749 -60841256 - L1M3 LINE L1 -530 5653 5628 2076 145 0 25 chr20 5826749 5827067 -60840938 + AluSx SINE Alu 1 310 -2 439 258 33 38 chr20 5827067 5827289 -60840716 - L1M3 LINE L1 -555 5628 5412 2159 152 16 45 chr20 5827950 5828170 -60839835 - MLT1A1 LTR MaLR 0 365 159 2558 85 0 0 chr20 5828170 5828477 -60839528 - AluSp SINE Alu -6 307 1 2159 152 16 45 chr20 5828477 5828632 -60839373 - MLT1A1 LTR MaLR -206 159 1 2362 102 0 16 chr20 5829183 5829498 -60838507 - AluSx SINE Alu -2 310 1 2116 136 0 10 chr20 5829498 5829806 -60838199 - AluSx SINE Alu -7 305 1 23 0 0 0 chr20 5829815 5829838 -60838167 + AT_rich Low_complexity Low_complexity 1 23 0 1916 148 44 7 chr20 5830096 5830394 -60837611 - AluJb SINE Alu 0 312 4 216 362 109 7 chr20 5830470 5830608 -60837397 - L2 LINE L2 -5 3267 3116 612 306 39 55 chr20 5830742 5831072 -60836933 - MLT1H LTR MaLR -195 354 30 339 136 0 0 chr20 5831204 5831263 -60836742 + (TCCC)n Simple_repeat Simple_repeat 1 59 0 1620 117 19 127 chr20 5831264 5831438 -60836567 - AluJo SINE Alu -23 289 164 1698 184 31 3 chr20 5831438 5831726 -60836279 + AluJb SINE Alu 3 298 -14 1620 117 19 127 chr20 5831726 5831875 -60836130 - AluJo SINE Alu -148 164 1 2201 122 0 3 chr20 5832069 5832373 -60835632 + AluSx SINE Alu 1 303 -9 2237 39 0 12 chr20 5832503 5832761 -60835244 - AluY SINE Alu -16 295 41 836 142 8 30 chr20 5833040 5833174 -60834831 - FLAM_C SINE Alu -2 131 1 414 57 0 0 chr20 5833277 5833330 -60834675 + (TATG)n Simple_repeat Simple_repeat 2 54 0 602 266 16 99 chr20 5833390 5833552 -60834453 - MLT1I LTR MaLR -98 311 184 1995 131 6 35 chr20 5833552 5833864 -60834141 + AluSx SINE Alu 1 303 -9 602 266 16 99 chr20 5833864 5834005 -60834000 - MLT1I LTR MaLR -225 184 33 564 243 79 79 chr20 5834196 5834355 -60833650 + MIR SINE MIR 44 202 -60 858 139 106 101 chr20 5834355 5834471 -60833534 + MER3 DNA MER1_type 1 120 -89 2015 94 0 8 chr20 5834471 5834738 -60833267 - AluSx SINE Alu -45 267 3 858 139 106 101 chr20 5834738 5834829 -60833176 + MER3 DNA MER1_type 120 209 0 564 243 79 79 chr20 5834829 5834841 -60833164 + MIR SINE MIR 202 213 -49 1710 202 10 0 chr20 5834841 5835138 -60832867 + AluJb SINE Alu 1 300 -12 564 243 79 79 chr20 5835138 5835179 -60832826 + MIR SINE MIR 212 257 -5 1513 184 112 90 chr20 5835603 5835880 -60832125 - MLT1C LTR MaLR 0 467 175 2317 111 0 10 chr20 5835880 5836187 -60831818 - AluJb SINE Alu -8 304 1 1513 184 112 90 chr20 5836187 5836366 -60831639 - MLT1C LTR MaLR -292 175 1 276 125 42 0 chr20 5836676 5836724 -60831281 + MLT1K LTR MaLR 539 588 0 661 245 43 69 chr20 5837017 5837426 -60830579 + LTR16C LTR ERVL 100 456 -1 371 217 43 52 chr20 5837661 5837729 -60830276 - L1ME4a LINE L1 0 6121 6053 2140 123 7 3 chr20 5837729 5838029 -60829976 + AluSx SINE Alu 1 301 -11 371 217 43 52 chr20 5838029 5838075 -60829930 - L1ME4a LINE L1 -68 6053 6008 1759 141 13 46 chr20 5838675 5838979 -60829026 + AluJb SINE Alu 1 294 -18 1770 213 76 41 chr20 5838979 5839468 -60828537 + MLT1E2 LTR MaLR 114 619 -7 1136 282 55 40 chr20 5839607 5839740 -60828265 - LTR16C LTR ERVL -8 483 353 2201 101 7 7 chr20 5839740 5840036 -60827969 + AluSq SINE Alu 7 302 -11 2016 140 0 23 chr20 5840044 5840352 -60827653 + AluJb SINE Alu 1 301 -11 1136 282 55 40 chr20 5840352 5840680 -60827325 - LTR16C LTR ERVL -144 347 6 581 288 66 26 chr20 5840783 5840949 -60827056 + MIR SINE MIR 13 193 -69 2166 108 0 11 chr20 5840949 5841293 -60826712 - AluSx SINE Alu 0 341 1 581 288 66 26 chr20 5841293 5841351 -60826654 + MIR SINE MIR 193 247 -15 1538 154 32 43 chr20 5841537 5841817 -60826188 + AluJo SINE Alu 15 291 -21 1393 93 6 0 chr20 5841852 5842024 -60825981 + AluSp SINE Alu 85 257 -56 863 228 52 40 chr20 5842125 5842397 -60825608 + Charlie4 DNA MER1_type 18 292 -1669 1863 131 0 72 chr20 5842403 5842735 -60825270 - AluSx SINE Alu 0 310 1 2016 203 43 51 chr20 5843028 5843535 -60824470 - MLT1D LTR MaLR -2 503 1 350 171 0 13 chr20 5843950 5844026 -60823979 + CT-rich Low_complexity Low_complexity 4 78 0 2046 126 4 0 chr20 5844026 5844304 -60823701 - AluSx SINE Alu -33 279 1 418 290 0 0 chr20 5844388 5844512 -60823493 + LTR16C LTR ERVL 357 480 -11 2199 139 0 0 chr20 5845064 5845366 -60822639 + AluSx SINE Alu 1 302 -10 2280 106 0 10 chr20 5845761 5846064 -60821941 + AluSq SINE Alu 1 300 -13 2440 101 0 0 chr20 5846274 5846581 -60821424 + AluSc SINE Alu 3 309 0 1471 226 36 7 chr20 5846696 5846997 -60821008 - AluJb SINE Alu -2 310 1 210 143 0 0 chr20 5847000 5847035 -60820970 + (T)n Simple_repeat Simple_repeat 1 35 0 549 258 168 0 chr20 5847155 5847322 -60820683 - MIR SINE MIR 0 262 68 1940 145 3 11 chr20 5847521 5847804 -60820201 + AluJb SINE Alu 11 291 -21 333 68 0 0 chr20 5847831 5847875 -60820130 + (TTTC)n Simple_repeat Simple_repeat 1 44 0 2127 152 0 3 chr20 5847878 5848188 -60819817 - AluSx SINE Alu -3 309 1 2034 137 3 3 chr20 5848353 5848646 -60819359 - AluJb SINE Alu -19 293 1 2345 105 0 0 chr20 5848661 5848955 -60819050 + AluSg SINE Alu 1 294 -16 1606 109 18 4 chr20 5849259 5849488 -60818517 - AluSg/x SINE Alu -2 310 79 11946 28 3 25 chr20 5849875 5851282 -60816723 + SVA Other Other 5 1380 -6 975 167 194 53 chr20 5851369 5851468 -60816537 + AluSg SINE Alu 1 85 -215 2199 110 3 0 chr20 5851468 5851760 -60816245 - AluSp SINE Alu -4 309 17 975 167 194 53 chr20 5851760 5851923 -60816082 + AluSg SINE Alu 85 300 0 1754 187 10 7 chr20 5852796 5853101 -60814904 - AluJo SINE Alu -6 306 1 2393 147 121 28 chr20 5853180 5853248 -60814757 - MLT1D LTR MaLR 0 505 445 2157 108 3 11 chr20 5853248 5853526 -60814479 + AluSc SINE Alu 1 278 -31 327 25 0 0 chr20 5853526 5853566 -60814439 + (CA)n Simple_repeat Simple_repeat 1 40 0 2393 147 121 28 chr20 5853574 5853967 -60814038 - MLT1D LTR MaLR -60 445 1 2039 147 19 3 chr20 5853991 5854298 -60813707 + AluJb SINE Alu 1 312 0 706 296 71 24 chr20 5854422 5854675 -60813330 + LTR16C LTR ERVL 42 306 -185 918 122 0 8 chr20 5854676 5854807 -60813198 + FLAM_C SINE Alu 1 130 -13 688 246 6 34 chr20 5854838 5855017 -60812988 + LTR16C LTR ERVL 313 486 -5 329 285 50 13 chr20 5855023 5855132 -60812873 - MIR SINE MIR -102 106 8 2385 96 0 3 chr20 5855735 5856047 -60811958 - AluSq SINE Alu -2 311 1 1482 134 22 109 chr20 5856156 5856477 -60811528 - AluJb SINE Alu -11 301 9 604 163 0 0 chr20 5856482 5856574 -60811431 - AluJo SINE Alu -20 292 201 * 789 146 7 35 chr20 5856570 5856714 -60811291 - AluJo SINE Alu -170 142 3 1754 158 0 26 chr20 5857374 5857677 -60810328 - AluJo SINE Alu -13 299 5 2099 110 3 0 chr20 5857696 5857995 -60810010 - AluSx SINE Alu -10 302 3 1451 189 0 25 chr20 5858506 5858836 -60809169 + AluJo SINE Alu 9 331 0 691 182 0 0 chr20 5858850 5858960 -60809045 + FLAM_C SINE Alu 2 111 -32 453 19 0 0 chr20 5858967 5859021 -60808984 + (TAA)n Simple_repeat Simple_repeat 1 54 0 845 111 0 32 chr20 5860004 5860130 -60807875 + FLAM_C SINE Alu 2 123 -10 800 76 0 0 chr20 5860134 5860239 -60807766 + AluY SINE Alu 194 298 -13 2176 95 0 0 chr20 5860245 5860530 -60807475 + AluSg SINE Alu 1 285 -25 288 77 0 0 chr20 5860530 5860569 -60807436 + (CATA)n Simple_repeat Simple_repeat 2 40 0 1857 160 0 0 chr20 5860685 5860985 -60807020 - AluSx SINE Alu -12 300 1 643 291 62 55 chr20 5861013 5861736 -60806269 - L1MEd LINE L1 -4579 1731 971 934 219 109 29 chr20 5861736 5862010 -60805995 + MLT1A2 LTR MaLR 1 296 -78 1565 164 20 40 chr20 5862070 5862374 -60805631 + AluSx SINE Alu 1 298 -14 1730 165 13 3 chr20 5862422 5862772 -60805233 - AluJb SINE Alu 0 353 1 318 285 173 10 chr20 5863504 5863763 -60804242 + L1MC/D LINE L1 5425 5737 -586 988 205 20 94 chr20 5863930 5864228 -60803777 - MLT1A2 LTR MaLR 0 374 99 2036 102 93 130 chr20 5864231 5864693 -60803312 - Tigger2 DNA MER2_type -3 2715 2271 396 194 0 0 chr20 5864677 5864749 -60803256 - Tigger2 DNA MER2_type -2646 72 1 * 234 227 0 113 chr20 5864757 5864854 -60803151 - MLT1A2 LTR MaLR -278 87 2 590 268 121 17 chr20 5864858 5865089 -60802916 + LTR16C LTR ERVL 223 477 -14 1942 164 22 43 chr20 5865146 5865291 -60802714 + MLT1A1 LTR MaLR 1 148 -217 1790 154 3 13 chr20 5865291 5865597 -60802408 - AluJb SINE Alu -9 303 1 1942 164 22 43 chr20 5865597 5865822 -60802183 + MLT1A1 LTR MaLR 148 363 -2 2481 65 0 0 chr20 5866230 5866536 -60801469 - AluY SINE Alu -5 306 1 1660 171 30 3 chr20 5866555 5866854 -60801151 - AluSx SINE Alu -5 307 1 234 239 60 0 chr20 5866856 5866923 -60801082 - L1ME LINE L1 -266 5904 5834 1479 130 41 30 chr20 5867052 5867321 -60800684 - AluJb SINE Alu -39 273 2 361 61 0 0 chr20 5867321 5867370 -60800635 + AluSp/q SINE Alu 248 296 -7 226 169 56 84 chr20 5867597 5867668 -60800337 - MER61B LTR ERV1 -272 153 85 1350 285 80 8 chr20 5868024 5868497 -60799508 - LTR33 LTR ERVL -14 507 1 382 127 0 0 chr20 5868761 5868816 -60799189 - MER20 DNA MER1_type -2 217 163 536 272 56 52 chr20 5868871 5869084 -60798921 - MLT1H LTR MaLR -262 287 74 2162 106 3 0 chr20 5869742 5870045 -60797960 + AluSc SINE Alu 1 304 -5 944 132 38 128 chr20 5870046 5870281 -60797724 - AluJb SINE Alu -23 289 76 1895 109 26 22 chr20 5870290 5870601 -60797404 + AluSx SINE Alu 1 312 0 323 195 0 98 chr20 5870628 5870710 -60797295 - AluJb SINE Alu -223 79 6 934 200 41 15 chr20 5870737 5870932 -60797073 + MIR SINE MIR 12 211 -51 1726 154 0 17 chr20 5870932 5871224 -60796781 + AluJb SINE Alu 1 287 -25 2102 117 0 0 chr20 5871299 5871598 -60796407 - AluSx SINE Alu -13 299 1 29 59 0 15 chr20 5872041 5872079 -60795926 + AT_rich Low_complexity Low_complexity 1 39 -28 2309 84 0 3 chr20 5872079 5872387 -60795618 + AluSg1 SINE Alu 1 307 -2 29 59 0 15 chr20 5872387 5872416 -60795589 + AT_rich Low_complexity Low_complexity 39 67 0 1792 144 7 7 chr20 5872495 5872786 -60795219 + AluJb SINE Alu 13 303 -9 2215 113 0 0 chr20 5872869 5873171 -60794834 - AluSg SINE Alu -8 302 1 2183 127 0 0 chr20 5873830 5874138 -60793867 + AluSx SINE Alu 1 308 -4 22 0 0 0 chr20 5874221 5874243 -60793762 + AT_rich Low_complexity Low_complexity 1 22 0 1786 162 7 7 chr20 5874255 5874563 -60793442 + AluJb SINE Alu 1 308 -4 670 213 24 0 chr20 5874582 5874709 -60793296 + FLAM_A SINE Alu 1 130 -3 2214 97 0 7 chr20 5874709 5875009 -60792996 - AluSq SINE Alu -15 298 1 2276 87 0 22 chr20 5875113 5875424 -60792581 + AluSc SINE Alu 1 304 -5 1519 245 113 48 chr20 5875459 5876018 -60791987 - MLT1G1 LTR MaLR 0 595 1 1345 186 21 0 chr20 5876761 5876998 -60791007 + MLT1D LTR MaLR 1 242 -263 223 164 33 0 chr20 5877009 5877070 -60790935 + GA-rich Low_complexity Low_complexity 2 64 0 21 36 0 0 chr20 5877138 5877166 -60790839 + AT_rich Low_complexity Low_complexity 1 28 0 1861 74 82 0 chr20 5877167 5877423 -60790582 - AluSp SINE Alu -14 299 23 396 109 0 0 chr20 5877423 5877478 -60790527 - Alu SINE Alu -246 56 2 1760 143 20 3 chr20 5877478 5877771 -60790234 - AluJo SINE Alu -14 298 1 513 135 128 11 chr20 5877771 5877922 -60790083 + MLT1D LTR MaLR 295 542 0 1833 138 7 10 chr20 5878278 5878568 -60789437 - AluJb SINE Alu -22 290 2 1350 170 9 88 chr20 5878581 5878899 -60789106 - AluJb SINE Alu -19 293 1 231 226 32 0 chr20 5879109 5879171 -60788834 + LTR33 LTR ERVL 9 72 -449 347 162 59 0 chr20 5879250 5879318 -60788687 + LTR16C LTR ERVL 420 491 0 1952 119 13 44 chr20 5879438 5879756 -60788249 - AluSx SINE Alu -4 308 1 192 111 0 0 chr20 5879917 5879953 -60788052 + (CAGA)n Simple_repeat Simple_repeat 2 37 0 259 294 261 0 chr20 5881329 5881448 -60786557 - L2 LINE L2 0 3313 3164 1363 132 38 9 chr20 5881459 5881672 -60786333 + MER20 DNA MER1_type 1 219 0 1167 186 0 0 chr20 5881680 5881868 -60786137 + MER5A DNA MER1_type 1 188 -1 329 223 48 117 chr20 5881953 5882005 -60786000 + MER5A DNA MER1_type 25 68 -121 2378 77 0 0 chr20 5882005 5882316 -60785689 + AluY SINE Alu 1 311 0 329 223 48 117 chr20 5882316 5882366 -60785639 + MER5A DNA MER1_type 68 120 -69 2123 118 7 0 chr20 5882427 5882733 -60785272 + AluSx SINE Alu 1 308 -4 1187 258 142 42 chr20 5883131 5883588 -60784417 + MLT1J LTR MaLR 1 503 -8 2095 125 0 0 chr20 5884016 5884312 -60783693 + AluSx SINE Alu 1 296 -16 390 42 0 0 chr20 5884313 5884361 -60783644 + (CA)n Simple_repeat Simple_repeat 1 48 0 374 204 11 0 chr20 5884560 5884648 -60783357 + GA-rich Low_complexity Low_complexity 3 91 0 2081 133 0 0 chr20 5885136 5885437 -60782568 + AluSx SINE Alu 1 301 -11 1252 152 61 98 chr20 5885447 5885743 -60782262 + AluJb SINE Alu 6 290 -22 511 128 13 0 chr20 5886190 5886268 -60781737 + AluS SINE Alu 221 299 -13 1962 122 7 7 chr20 5887000 5887296 -60780709 - AluSx SINE Alu -16 296 1 2073 121 0 16 chr20 5887614 5887927 -60780078 - AluSx SINE Alu -4 308 1 2223 90 0 0 chr20 5888460 5888760 -60779245 - AluY SINE Alu -11 300 1 405 226 65 40 chr20 5888793 5888917 -60779088 + MIR SINE MIR 61 187 -75 218 275 92 37 chr20 5888924 5889033 -60778972 + MIR SINE MIR 148 262 0 1640 161 18 0 chr20 5889109 5889382 -60778623 + AluJb SINE Alu 1 278 -34 189 0 0 0 chr20 5889386 5889407 -60778598 + (CAA)n Simple_repeat Simple_repeat 1 21 0 1790 138 7 26 chr20 5889409 5889714 -60778291 + AluSx SINE Alu 1 299 -13 1502 180 24 24 chr20 5890125 5890419 -60777586 + AluJo SINE Alu 1 294 -18 5404 142 25 45 chr20 5890523 5890854 -60777151 - L1MA8 LINE L1 -4 6287 5951 2122 125 0 0 chr20 5890854 5891158 -60776847 - AluSx SINE Alu -8 304 1 5404 142 25 45 chr20 5891158 5891394 -60776611 - L1MA8 LINE L1 -340 5951 5712 2100 135 0 0 chr20 5891394 5891705 -60776300 - AluSx SINE Alu -1 311 1 5404 142 25 45 chr20 5891705 5891962 -60776043 - L1MA8 LINE L1 -579 5712 5452 2210 98 0 13 chr20 5891962 5892277 -60775728 - AluSq SINE Alu -2 311 1 5404 142 25 45 chr20 5892277 5892677 -60775328 - L1MA8 LINE L1 -839 5452 5080 1843 137 10 3 chr20 5892679 5892978 -60775027 + AluSx SINE Alu 1 301 -11 2281 88 0 3 chr20 5893023 5893328 -60774677 + AluSg SINE Alu 1 304 -6 2286 100 0 0 chr20 5893431 5893740 -60774265 - AluSc SINE Alu 0 309 1 2325 100 0 0 chr20 5893743 5894053 -60773952 - AluSx SINE Alu 0 312 3 1098 182 0 0 chr20 5894056 5894254 -60773751 + AluJb SINE Alu 106 303 -9 3638 138 60 31 chr20 5894740 5895030 -60772975 + LTR8 LTR ERV1 1 281 -410 1549 125 0 0 chr20 5895030 5895254 -60772751 + AluSx SINE Alu 54 277 -35 192 40 0 0 chr20 5895254 5895279 -60772726 + (CAA)n Simple_repeat Simple_repeat 3 27 0 3638 138 60 31 chr20 5895279 5895659 -60772346 + LTR8 LTR ERV1 280 691 0 438 316 92 57 chr20 5895947 5896317 -60771688 - L2 LINE L2 0 3272 2890 2162 98 3 0 chr20 5896318 5896640 -60771365 + AluSx SINE Alu 3 312 0 1423 156 240 73 chr20 5896781 5897018 -60770987 + LTR54 LTR ERV1 1 197 -313 1727 144 45 0 chr20 5897018 5897309 -60770696 + AluSx SINE Alu 1 304 -8 1423 156 240 73 chr20 5897309 5897508 -60770497 + LTR54 LTR ERV1 197 510 0 22 0 0 0 chr20 5897634 5897656 -60770349 + AT_rich Low_complexity Low_complexity 1 22 0 2521 33 0 0 chr20 5897666 5897965 -60770040 + AluY SINE Alu 1 299 -12 670 191 0 23 chr20 5897965 5898088 -60769917 - FLAM_C SINE Alu -186 126 5 2174 84 14 0 chr20 5898104 5898401 -60769604 - AluSp SINE Alu -10 303 3 1571 145 27 37 chr20 5898406 5898702 -60769303 - AluJb SINE Alu -19 293 1 847 178 0 6 chr20 5899398 5899561 -60768444 + FRAM SINE Alu 1 162 -14 843 236 52 40 chr20 5899568 5899818 -60768187 - L1MB7 LINE L1 -68 6116 5864 1911 122 0 30 chr20 5899849 5900152 -60767853 - AluSg SINE Alu -16 294 1 2398 171 26 99 chr20 5900209 5900661 -60767344 - MER4D LTR ERV1 0 903 510 2036 145 0 0 chr20 5900661 5900971 -60767034 + AluSx SINE Alu 1 310 -2 2398 171 26 99 chr20 5900971 5901163 -60766842 - MER4D LTR ERV1 -393 510 306 1052 150 6 6 chr20 5901163 5901330 -60766675 - AluSg/x SINE Alu -12 300 134 2074 120 0 13 chr20 5901330 5901646 -60766359 - AluSx SINE Alu 0 312 1 493 132 53 63 chr20 5901650 5901846 -60766159 - MER4D LTR ERV1 -566 347 70 725 139 0 41 chr20 5901871 5901953 -60766052 - FLAM_C SINE Alu -194 118 41 2248 202 48 60 chr20 5901953 5902572 -60765433 + LTR9 LTR ERV1 1 612 0 725 139 0 41 chr20 5902572 5902611 -60765394 - FLAM_C SINE Alu -271 41 2 809 118 14 69 chr20 5902614 5902664 -60765341 - MER4D LTR ERV1 -664 239 188 1996 133 0 0 chr20 5902664 5902958 -60765047 - AluJb SINE Alu -18 294 1 809 118 14 69 chr20 5902958 5903051 -60764954 - MER4D LTR ERV1 -715 188 104 1269 128 63 48 chr20 5903051 5903321 -60764684 - MER4D LTR ERV1 0 903 534 2399 84 0 0 chr20 5903321 5903632 -60764373 + AluSx SINE Alu 1 311 -1 1269 128 63 48 chr20 5903632 5903772 -60764233 - MER4D LTR ERV1 -369 534 398 1936 146 3 1 chr20 5903772 5904080 -60763925 + MER1B DNA MER1_type 1 339 0 2191 110 3 0 chr20 5904096 5904405 -60763600 - AluSp SINE Alu -2 311 2 2063 130 19 6 chr20 5904405 5904727 -60763278 - MER4D LTR ERV1 -505 398 73 807 132 0 8 chr20 5904727 5904848 -60763157 + FLAM_C SINE Alu 12 131 -12 1109 204 71 19 chr20 5904896 5905219 -60762786 - L1M4 LINE L1 -1573 4573 4234 793 182 149 0 chr20 5905226 5905380 -60762625 - AluSp SINE Alu 0 313 137 1270 209 107 133 chr20 5905381 5905608 -60762397 - L1M4 LINE L1 -1903 4243 4012 1748 153 36 23 chr20 5905608 5905916 -60762089 - AluSx SINE Alu 0 312 1 1270 209 107 133 chr20 5905916 5906147 -60761858 - L1M4 LINE L1 -2134 4012 3805 2356 106 0 0 chr20 5906147 5906450 -60761555 - AluSq SINE Alu -10 303 1 1270 209 107 133 chr20 5906450 5906661 -60761344 - L1M4 LINE L1 -2341 3805 3590 491 143 22 0 chr20 5906846 5906937 -60761068 + GA-rich Low_complexity Low_complexity 5 97 0 2220 125 0 7 chr20 5906961 5907266 -60760739 - AluSg SINE Alu -7 303 1 2236 103 3 3 chr20 5907499 5907800 -60760205 - AluSg SINE Alu -9 301 1 1817 139 15 4 chr20 5907819 5908086 -60759919 - AluSx SINE Alu -20 292 23 1763 170 0 24 chr20 5908094 5908388 -60759617 - AluJb SINE Alu -25 287 1 483 185 65 146 chr20 5908391 5908651 -60759354 - L1MC4 LINE L1 0 8042 7804 2271 114 0 0 chr20 5908958 5909256 -60758749 + AluSx SINE Alu 1 298 -14 2902 65 3 0 chr20 5909616 5909983 -60758022 + L1PA8 LINE L1 5805 6172 0 2394 97 0 0 chr20 5910155 5910455 -60757550 - AluSx SINE Alu -12 300 1 2136 101 29 0 chr20 5910527 5910805 -60757200 + AluSx SINE Alu 11 296 -16 2298 104 3 3 chr20 5911240 5911539 -60756466 + AluSc SINE Alu 1 299 -10 2291 72 58 0 chr20 5911572 5911863 -60756142 + AluSp SINE Alu 1 308 -5 190 208 0 75 chr20 5911868 5911890 -60756115 - MIR SINE MIR -92 170 148 3007 121 26 2 chr20 5911890 5912344 -60755661 + MER4C LTR ERV1 1 465 0 190 208 0 75 chr20 5912344 5912374 -60755631 - MIR SINE MIR -114 148 122 2197 102 0 57 chr20 5912374 5912688 -60755317 + AluSx SINE Alu 1 296 -16 328 257 76 9 chr20 5912698 5912803 -60755202 + L1MC4 LINE L1 6610 6721 -1321 328 232 24 12 chr20 5912804 5912886 -60755119 - MIR SINE MIR -146 116 34 1454 196 0 33 chr20 5912955 5913231 -60754774 + AluJo SINE Alu 1 267 -45 892 125 0 15 chr20 5913612 5913748 -60754257 - FLAM_C SINE Alu -3 140 7 2256 104 0 25 chr20 5913778 5914095 -60753910 - AluSg SINE Alu -1 309 1 891 134 0 8 chr20 5914332 5914466 -60753539 - AluSq/x SINE Alu -180 133 1 505 211 145 30 chr20 5915037 5915253 -60752752 + MIR SINE MIR 11 250 -12 773 181 0 0 chr20 5915319 5915452 -60752553 - FLAM_C SINE Alu 0 133 1 1625 157 18 28 chr20 5915670 5915985 -60752020 - AluJo SINE Alu 0 312 1 2193 119 3 3 chr20 5916520 5916822 -60751183 - AluSx SINE Alu -10 302 1 210 288 180 7 chr20 5916961 5917100 -60750905 + L2 LINE L2 3073 3235 -37 407 150 0 0 chr20 5917355 5917415 -60750590 - tRNA-Gly-GGA tRNA tRNA -1 74 15 1859 166 7 7 chr20 5917452 5917754 -60750251 - AluJo SINE Alu -10 302 1 14578 120 36 60 chr20 5917970 5918269 -60749736 - Tigger7 DNA MER2_type 0 2487 2182 2503 88 0 0 chr20 5918269 5918574 -60749431 + AluSq SINE Alu 1 305 -8 14578 120 36 60 chr20 5918574 5920411 -60747594 - Tigger7 DNA MER2_type -305 2182 419 2355 106 0 3 chr20 5920411 5920723 -60747282 - AluSq SINE Alu -2 311 1 14578 120 36 60 chr20 5920723 5921133 -60746872 - Tigger7 DNA MER2_type -2068 419 1 959 137 0 0 chr20 5921181 5921320 -60746685 + FLAM_C SINE Alu 5 143 0 195 42 0 0 chr20 5922182 5922206 -60745799 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 420 316 71 15 chr20 5922246 5922442 -60745563 + MIR SINE MIR 47 253 -9 2440 89 3 0 chr20 5922469 5922773 -60745232 + AluSq SINE Alu 1 305 -8 2287 113 126 5 chr20 5923001 5923383 -60744622 - MSTA LTR MaLR 0 428 1 1726 153 3 14 chr20 5923593 5923880 -60744125 - AluJo SINE Alu -18 294 11 537 270 82 5 chr20 5924210 5924406 -60743599 + MIR SINE MIR 33 243 -19 2231 92 3 38 chr20 5924471 5924786 -60743219 - AluSx SINE Alu -8 304 1 1004 200 121 17 chr20 5924787 5925027 -60742978 - MLT1A1 LTR MaLR -11 354 90 2186 104 0 0 chr20 5925028 5925315 -60742690 + AluSx SINE Alu 1 287 -25 328 245 69 134 chr20 5925462 5925538 -60742467 - MIR SINE MIR -12 250 171 2324 107 3 0 chr20 5925538 5925836 -60742169 - AluSx SINE Alu -13 299 1 328 245 69 134 chr20 5925836 5925975 -60742030 - MIR SINE MIR -91 171 49 1324 186 79 52 chr20 5925990 5926280 -60741725 - AluJo SINE Alu -14 298 1 2063 57 0 42 chr20 5926656 5926919 -60741086 - AluY SINE Alu -4 307 56 1659 141 8 16 chr20 5926921 5927169 -60740836 + AluJb SINE Alu 54 299 -13 2085 142 3 0 chr20 5927468 5927764 -60740241 + AluSx SINE Alu 1 297 -15 2260 125 3 0 chr20 5928514 5928825 -60739180 - AluSx SINE Alu 0 312 1 919 203 0 0 chr20 5929801 5929959 -60738046 + FRAM SINE Alu 3 160 -6 2144 113 0 3 chr20 5930034 5930326 -60737679 - AluSx SINE Alu -21 291 1 2197 116 3 0 chr20 5931768 5932071 -60735934 - AluSx SINE Alu -8 304 1 2357 85 10 3 chr20 5932417 5932723 -60735282 + AluSx SINE Alu 1 308 -4 260 333 0 0 chr20 5932736 5932808 -60735197 - MIR SINE MIR -55 153 82 21 36 0 0 chr20 5932959 5932987 -60735018 + AT_rich Low_complexity Low_complexity 1 28 0 2592 42 3 7 chr20 5932987 5933297 -60734708 - AluY SINE Alu -2 309 1 437 293 61 24 chr20 5933782 5933994 -60734011 - MIR SINE MIR -12 250 31 2441 93 0 0 chr20 5934061 5934361 -60733644 + AluSx SINE Alu 1 300 -12 3250 94 11 18 chr20 5934577 5934842 -60733163 + MER39B LTR ERV1 1 263 -390 1799 167 13 26 chr20 5934842 5935153 -60732852 + AluJo SINE Alu 1 307 -5 3250 94 11 18 chr20 5935153 5935344 -60732661 + MER39B LTR ERV1 263 454 -199 449 215 14 93 chr20 5935350 5935512 -60732493 - L1MDb LINE L1 -5753 656 452 1117 138 64 15 chr20 5935532 5935735 -60732270 + MER39B LTR ERV1 441 653 0 270 157 20 0 chr20 5936208 5936259 -60731746 + L2 LINE L2 3221 3272 0 2018 114 26 19 chr20 5937398 5937705 -60730300 + AluSx SINE Alu 2 310 -2 2386 103 0 0 chr20 5937842 5938142 -60729863 + AluSq SINE Alu 1 300 -13 4585 193 103 29 chr20 5938162 5938995 -60729010 + L1MDb LINE L1 3 773 -5636 2276 101 0 3 chr20 5938995 5939301 -60728704 - AluSx SINE Alu -7 305 1 4585 193 103 29 chr20 5939301 5939428 -60728577 + L1MDb LINE L1 773 889 -5520 1733 189 0 0 chr20 5939428 5939709 -60728296 + AluJo SINE Alu 1 281 -31 4585 193 103 29 chr20 5939709 5939834 -60728171 + L1MDb LINE L1 889 1003 -5406 1961 145 7 3 chr20 5939834 5940138 -60727867 + AluJb SINE Alu 5 309 -3 4585 193 103 29 chr20 5940138 5940167 -60727838 + L1MDb LINE L1 1003 1202 -5207 880 189 6 0 chr20 5940170 5940350 -60727655 + L1M4 LINE L1 5127 5307 -839 2893 175 33 58 chr20 5940369 5940955 -60727050 - L1M3 LINE L1 -634 5537 4938 1848 128 0 0 chr20 5940955 5941213 -60726792 - AluSx SINE Alu 0 312 55 2893 175 33 58 chr20 5941213 5941245 -60726760 - L1M3 LINE L1 -1233 4938 4907 1962 126 0 4 chr20 5941245 5941522 -60726483 - AluSx SINE Alu -36 276 1 2893 175 33 58 chr20 5941522 5941803 -60726202 - L1M3 LINE L1 -1264 4907 4666 2010 109 7 7 chr20 5942283 5942557 -60725448 - AluSq SINE Alu -39 274 1 576 229 6 59 chr20 5942634 5942804 -60725201 + MIR SINE MIR 32 192 -70 2162 121 0 0 chr20 5943504 5943815 -60724190 + AluSx SINE Alu 1 311 0 2250 116 0 10 chr20 5943862 5944172 -60723833 + AluSx SINE Alu 1 307 -5 2555 50 0 35 chr20 5944247 5944564 -60723441 + AluY SINE Alu 1 306 -5 2073 139 0 7 chr20 5945092 5945395 -60722610 + AluJb SINE Alu 1 301 -11 213 203 47 31 chr20 5945707 5945771 -60722234 + GA-rich Low_complexity Low_complexity 4 68 0 1873 166 0 7 chr20 5945826 5946128 -60721877 + AluJo SINE Alu 1 300 -12 965 218 95 93 chr20 5946479 5946852 -60721153 - MLT1H1 LTR MaLR 0 555 184 2446 74 7 0 chr20 5946852 5947149 -60720856 - AluY SINE Alu -12 299 1 965 218 95 93 chr20 5947149 5947160 -60720845 - MLT1H1 LTR MaLR -371 184 175 2164 68 0 4 chr20 5947160 5947425 -60720580 - AluY SINE Alu -7 304 41 965 218 95 93 chr20 5947425 5947449 -60720556 - MLT1H1 LTR MaLR -380 175 153 1902 136 0 60 chr20 5947449 5947765 -60720240 + AluJb SINE Alu 1 297 -15 965 218 95 93 chr20 5947765 5947795 -60720210 - MLT1H1 LTR MaLR -402 153 114 1753 176 0 40 chr20 5947837 5948161 -60719844 - AluJb SINE Alu -1 311 1 301 189 37 0 chr20 5948168 5948232 -60719773 - MLT1H LTR MaLR -409 140 1 1174 145 34 24 chr20 5948551 5948758 -60719247 + MER20 DNA MER1_type 1 209 -10 23 33 0 0 chr20 5948928 5948958 -60719047 + AT_rich Low_complexity Low_complexity 1 30 0 2138 105 27 0 chr20 5948959 5949253 -60718752 + AluSx SINE Alu 1 302 -10 201 303 0 0 chr20 5949352 5949418 -60718587 + (TATG)n Simple_repeat Simple_repeat 2 67 0 335 229 60 0 chr20 5949486 5949569 -60718436 - MLT1I LTR MaLR -8 401 314 2233 115 7 0 chr20 5949619 5949923 -60718082 - AluSq SINE Alu -7 306 1 718 279 32 9 chr20 5950894 5951113 -60716892 + MIR SINE MIR 35 258 -4 192 152 0 0 chr20 5951155 5951188 -60716817 + CT-rich Low_complexity Low_complexity 4 36 0 1058 161 8 3 chr20 5951189 5951428 -60716577 - AluJb SINE Alu -5 307 2 1852 161 16 26 chr20 5951705 5952016 -60715989 - AluJo SINE Alu -4 308 1 2348 93 0 16 chr20 5952136 5952448 -60715557 + AluSc SINE Alu 1 307 -2 1697 132 0 13 chr20 5952576 5952811 -60715194 + AluSx SINE Alu 1 232 -80 2142 99 4 0 chr20 5953717 5953989 -60714016 - AluSp SINE Alu -25 288 16 2177 128 0 0 chr20 5954150 5954448 -60713557 - AluSx SINE Alu -14 298 1 764 207 0 0 chr20 5954577 5954712 -60713293 - AluJo SINE Alu -177 135 1 344 118 59 12 chr20 5955841 5955926 -60712079 + CT-rich Low_complexity Low_complexity 4 92 0 1224 193 57 11 chr20 5955927 5956191 -60711814 - AluJo SINE Alu -8 304 29 1981 125 50 0 chr20 5956547 5956827 -60711178 + AluSg SINE Alu 1 294 -16 299 274 0 12 chr20 5956897 5956981 -60711024 + (CATA)n Simple_repeat Simple_repeat 4 86 0 566 253 80 45 chr20 5956995 5957277 -60710728 - L1ME1 LINE L1 -229 5937 5658 937 161 73 69 chr20 5958204 5958422 -60709583 + MER20 DNA MER1_type 1 219 0 2354 95 0 0 chr20 5958524 5958819 -60709186 + AluSg SINE Alu 1 295 -15 226 318 155 20 chr20 5958906 5959054 -60708951 + MIR3 SINE MIR 34 201 -7 1864 137 41 20 chr20 5959159 5959451 -60708554 + AluSx SINE Alu 1 298 -14 1919 161 0 3 chr20 5960120 5960418 -60707587 + AluJo SINE Alu 1 297 -15 547 262 43 0 chr20 5960439 5960580 -60707425 + MIR SINE MIR 57 203 -59 318 106 0 0 chr20 5960602 5960649 -60707356 + (T)n Simple_repeat Simple_repeat 1 47 0 395 186 39 20 chr20 5961298 5961400 -60706605 - L2 LINE L2 -1 3312 3209 1988 161 0 3 chr20 5961412 5961723 -60706282 - AluJb SINE Alu -2 310 1 2132 115 3 7 chr20 5961753 5962048 -60705957 + AluSx SINE Alu 1 294 -18 2254 112 0 10 chr20 5962489 5962803 -60705202 - AluJb SINE Alu -1 311 1 2005 125 33 10 chr20 5963196 5963500 -60704505 - AluJb SINE Alu -1 311 1 702 225 30 6 chr20 5963723 5963892 -60704113 - MER5B DNA MER1_type -5 173 1 197 274 245 29 chr20 5963900 5964002 -60704003 - MER5A DNA MER1_type 0 189 66 806 223 96 5 chr20 5964017 5964214 -60703791 + MER58C DNA MER1_type 1 215 0 2080 164 0 0 chr20 5964348 5964658 -60703347 + AluSx SINE Alu 3 312 0 27 62 0 0 chr20 5964730 5964778 -60703227 + AT_rich Low_complexity Low_complexity 1 48 0 347 322 27 34 chr20 5965055 5965204 -60702801 - MIR3 SINE MIR -43 165 18 975 244 22 32 chr20 5965306 5965335 -60702670 - L1MEc LINE L1 -5414 982 954 1979 137 10 7 chr20 5965335 5965642 -60702363 + AluJb SINE Alu 1 308 -4 975 244 22 32 chr20 5965642 5965928 -60702077 - L1MEc LINE L1 -5442 954 670 351 0 0 0 chr20 5965942 5965981 -60702024 + (TC)n Simple_repeat Simple_repeat 2 40 0 * 369 0 0 0 chr20 5965980 5966021 -60701984 + (TG)n Simple_repeat Simple_repeat 2 42 0 248 121 0 0 chr20 5966021 5966054 -60701951 - Alu SINE Alu -100 33 1 306 325 16 8 chr20 5966106 5966229 -60701776 - L1MEc LINE L1 -5775 621 498 2189 103 37 0 chr20 5966623 5966923 -60701082 - AluSx SINE Alu -1 311 1 2229 102 22 140 chr20 5967157 5967411 -60700594 - LTR45B LTR ERV1 -91 398 218 2137 131 3 0 chr20 5967411 5967709 -60700296 - AluSx SINE Alu -13 299 1 2229 102 22 140 chr20 5967709 5967904 -60700101 - LTR45B LTR ERV1 -271 218 2 1906 162 0 7 chr20 5968087 5968390 -60699615 + AluJo SINE Alu 1 301 -11 2147 100 19 26 chr20 5968482 5968793 -60699212 - AluSx SINE Alu -3 309 1 475 244 43 0 chr20 5968947 5969062 -60698943 - L2 LINE L2 -5 3267 3148 2215 88 3 11 chr20 5969775 5970083 -60697922 + AluSx SINE Alu 1 306 0 519 204 0 0 chr20 5970165 5970263 -60697742 - MLT1F LTR MaLR -59 508 411 743 283 57 32 chr20 5970318 5970597 -60697408 - MLT1F LTR MaLR -256 286 1 2203 107 0 3 chr20 5970723 5971013 -60696992 + AluSx SINE Alu 1 289 -23 24 0 0 0 chr20 5971013 5971037 -60696968 + AT_rich Low_complexity Low_complexity 1 24 0 201 152 0 0 chr20 5971072 5971105 -60696900 + (TG)n Simple_repeat Simple_repeat 2 34 0 1451 231 49 75 chr20 5971181 5971809 -60696196 + L2 LINE L2 1501 2112 -1202 630 171 120 8 chr20 5971851 5971968 -60696037 - AluSq/x SINE Alu -180 132 3 2309 115 3 0 chr20 5971983 5972295 -60695710 - AluSq SINE Alu 0 313 1 559 108 0 0 chr20 5972295 5972369 -60695636 + MER30 DNA MER1_type 126 199 -31 1231 280 119 8 chr20 5972407 5973115 -60694890 + L2 LINE L2 2522 3313 0 837 203 6 6 chr20 5974142 5974300 -60693705 + FRAM SINE Alu 1 158 -8 631 263 101 10 chr20 5975184 5975393 -60692612 + MIR SINE MIR 2 229 -33 595 240 101 35 chr20 5975581 5976014 -60691991 - LTR33 LTR ERVL 0 521 1 374 326 61 0 chr20 5976761 5976908 -60691097 + L2 LINE L2 3117 3272 0 1783 157 3 14 chr20 5977411 5977723 -60690282 - AluJo SINE Alu 0 309 1 1632 222 150 12 chr20 5978626 5978945 -60689060 + L1ME3A LINE L1 5583 5857 -313 2382 78 3 29 chr20 5978945 5979254 -60688751 + AluSp SINE Alu 1 301 -12 1632 222 150 12 chr20 5979254 5979433 -60688572 + L1ME3A LINE L1 5857 6150 -20 30 0 0 0 chr20 5979469 5979499 -60688506 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr20 5979538 5979567 -60688438 + AT_rich Low_complexity Low_complexity 1 29 0 198 0 0 0 chr20 5980275 5980297 -60687708 + (TC)n Simple_repeat Simple_repeat 1 22 0 354 215 70 82 chr20 5980309 5980467 -60687538 - L1ME4a LINE L1 -24 6097 5942 1766 172 24 0 chr20 5980492 5980788 -60687217 - AluSx SINE Alu -9 303 1 841 181 0 0 chr20 5981022 5981149 -60686856 - FLAM_A SINE Alu -6 127 1 298 146 0 36 chr20 5981289 5981396 -60686609 + L1PA12 LINE L1 6113 6217 0 551 80 60 50 chr20 5981796 5981896 -60686109 - L1PA15 LINE L1 -1 6164 6064 528 140 0 0 chr20 5982163 5982270 -60685735 + (GA)n Simple_repeat Simple_repeat 2 108 0 192 158 0 0 chr20 5982319 5982357 -60685648 + GA-rich Low_complexity Low_complexity 2 39 0 2083 166 46 3 chr20 5983241 5983591 -60684414 - MLT1A1 LTR MaLR 0 365 1 402 277 134 5 chr20 5985012 5985214 -60682791 + L2 LINE L2 2842 3069 -244 692 254 61 4 chr20 5985268 5985496 -60682509 + HAL1 LINE L1 727 967 -1540 275 225 12 25 chr20 5985589 5985669 -60682336 + HAL1 LINE L1 1824 1902 -605 662 175 12 105 chr20 5985755 5985841 -60682164 - Tigger2 DNA MER2_type 0 2718 2654 2866 62 3 11 chr20 5985841 5986213 -60681792 - L1PA11 LINE L1 -1 6173 5805 662 175 12 105 chr20 5986213 5986297 -60681708 - Tigger2 DNA MER2_type -64 2654 2564 * 1406 120 10 0 chr20 5986296 5986504 -60681501 - Tigger2 DNA MER2_type -2508 210 1 836 251 75 61 chr20 5986508 5986998 -60681007 + HAL1 LINE L1 2011 2507 0 2134 110 0 58 chr20 5987026 5987353 -60680652 + AluSx SINE Alu 1 308 -4 571 145 8 8 chr20 5987979 5988096 -60679909 + (TAGA)n Simple_repeat Simple_repeat 4 120 0 515 170 18 45 chr20 5988709 5988821 -60679184 + MIR SINE MIR 31 139 -123 350 314 50 6 chr20 5989216 5989375 -60678630 + LTR67 LTR ERVL 384 549 -8 269 203 29 14 chr20 5989382 5989451 -60678554 + MIR SINE MIR 157 226 -36 231 36 0 0 chr20 5989549 5989577 -60678428 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 181 306 0 32 chr20 5989635 5989697 -60678308 + MER5B DNA MER1_type 17 76 -102 297 0 0 0 chr20 5989718 5989751 -60678254 + (TG)n Simple_repeat Simple_repeat 1 33 0 596 187 0 41 chr20 5989776 5989899 -60678106 - L1ME3 LINE L1 0 6162 6045 263 222 32 0 chr20 5990984 5991047 -60676958 - HAL1 LINE L1 -923 1584 1520 1644 254 71 115 chr20 5991049 5992328 -60675677 - L1MEd LINE L1 -4878 1241 19 270 0 0 0 chr20 5993318 5993348 -60674657 + (TA)n Simple_repeat Simple_repeat 2 31 0 2289 101 0 10 chr20 5993348 5993645 -60674360 - AluSx SINE Alu -18 294 1 783 244 91 0 chr20 5993781 5993990 -60674015 - MIR SINE MIR -13 249 22 955 304 46 23 chr20 5994099 5994533 -60673472 + MARNA DNA Mariner 129 572 -14 184 182 0 0 chr20 5995772 5995805 -60672200 + MIR SINE MIR 113 145 -63 916 296 87 32 chr20 5996137 5996606 -60671399 + L1ME LINE L1 5319 5813 -349 246 240 0 0 chr20 5996736 5996786 -60671219 + (TATATG)n Simple_repeat Simple_repeat 1 50 0 1480 116 98 0 chr20 5996805 5997020 -60670985 + AluSx SINE Alu 1 236 -76 229 111 0 0 chr20 5997053 5997089 -60670916 - HSMAR1 DNA Mariner -1250 37 2 2946 6 0 0 chr20 5998225 5998537 -60669468 + AluYb8 SINE Alu 1 312 -6 789 139 9 0 chr20 5998545 5998699 -60669306 + FLAM_C SINE Alu 1 155 0 252 83 0 0 chr20 5998706 5998742 -60669263 + MER94 DNA DNA 79 114 -20 2389 90 0 10 chr20 5999044 5999356 -60668649 - AluSg SINE Alu 0 310 2 1701 185 0 29 chr20 5999753 6000066 -60667939 + AluJo SINE Alu 3 306 -6 631 136 25 111 chr20 6000078 6000277 -60667728 - MER33 DNA MER1_type -3 360 179 579 76 0 13 chr20 6000282 6000361 -60667644 + MSTA LTR MaLR 1 78 -348 200 109 43 22 chr20 6000373 6000419 -60667586 + (TTTAA)n Simple_repeat Simple_repeat 4 50 0 1906 133 17 7 chr20 6000483 6000776 -60667229 + MSTA LTR MaLR 133 428 0 589 175 56 32 chr20 6000782 6000908 -60667097 - MER33 DNA MER1_type -195 129 1 361 18 0 54 chr20 6000936 6000992 -60667013 + (TTCC)n Simple_repeat Simple_repeat 2 54 0 2122 114 31 0 chr20 6001008 6001297 -60666708 - AluSx SINE Alu -14 298 1 381 202 24 12 chr20 6001643 6001727 -60666278 - L2 LINE L2 -15 3298 3214 1856 91 0 0 chr20 6001765 6002022 -60665983 + AluSx SINE Alu 55 311 0 1856 147 3 33 chr20 6002390 6002554 -60665451 - AluJb SINE Alu -14 298 146 2258 117 0 0 chr20 6002554 6002853 -60665152 - AluSq SINE Alu -14 299 1 1856 147 3 33 chr20 6002853 6002995 -60665010 - AluJb SINE Alu -166 146 1 318 254 0 0 chr20 6003016 6003079 -60664926 - ERVL LTR ERVL -826 4938 4876 2347 141 33 85 chr20 6003198 6003420 -60664585 - L1MB2 LINE L1 -2 6169 5937 1788 148 3 39 chr20 6003420 6003725 -60664280 - AluJo SINE Alu -18 294 1 2347 141 33 85 chr20 6003725 6003911 -60664094 - L1MB2 LINE L1 -234 5937 5786 1926 156 0 0 chr20 6003911 6004219 -60663786 - AluSx SINE Alu 0 308 1 2347 141 33 85 chr20 6004219 6004292 -60663713 - L1MB2 LINE L1 -385 5786 5711 899 243 99 56 chr20 6004344 6004718 -60663287 + MLT1I LTR MaLR 16 405 -4 326 227 205 22 chr20 6004718 6004903 -60663102 - L2 LINE L2 -264 3049 2831 30 27 0 0 chr20 6005284 6005321 -60662684 + AT_rich Low_complexity Low_complexity 1 37 0 1911 95 76 0 chr20 6005499 6005809 -60662196 - AluSx SINE Alu 0 330 1 1808 133 17 24 chr20 6006074 6006367 -60661638 + AluJb SINE Alu 1 291 -21 2332 91 0 0 chr20 6006367 6006664 -60661341 + AluY SINE Alu 3 299 -12 22 0 0 0 chr20 6007053 6007075 -60660930 + AT_rich Low_complexity Low_complexity 1 22 0 1958 164 0 3 chr20 6007099 6007386 -60660619 + AluSx SINE Alu 1 286 -26 466 221 160 8 chr20 6007843 6007974 -60660031 - MER20 DNA MER1_type -17 202 52 1075 232 59 11 chr20 6008979 6009251 -60658754 - L1MC4 LINE L1 -213 7829 7545 315 0 0 0 chr20 6009424 6009459 -60658546 + (A)n Simple_repeat Simple_repeat 1 35 0 473 297 31 0 chr20 6010173 6010301 -60657704 - MIR3 SINE MIR -41 167 36 968 229 52 68 chr20 6010442 6010752 -60657253 - MLT1B LTR MaLR -85 305 1 235 175 79 16 chr20 6010752 6010815 -60657190 - Charlie4 DNA MER1_type -1708 253 187 2170 98 190 6 chr20 6010815 6011162 -60656843 + LTR57 LTR ERVL 1 411 0 983 143 11 48 chr20 6011169 6011358 -60656647 - Charlie4 DNA MER1_type -1779 182 1 804 252 73 57 chr20 6012066 6012502 -60655503 + LTR16A1 LTR ERVL 13 455 -2 25 0 0 0 chr20 6014650 6014675 -60653330 + AT_rich Low_complexity Low_complexity 1 25 0 817 171 0 0 chr20 6014682 6014799 -60653206 - FLAM_C SINE Alu -25 118 2 495 184 54 41 chr20 6014822 6014969 -60653036 - L1ME3A LINE L1 -1 6169 6021 23 0 0 0 chr20 6015197 6015220 -60652785 + AT_rich Low_complexity Low_complexity 1 23 0 2847 99 6 8 chr20 6015293 6015658 -60652347 - THE1B LTR MaLR 0 364 1 251 250 135 48 chr20 6015694 6015798 -60652207 + L2 LINE L2 2593 2705 -609 242 274 49 10 chr20 6016064 6016166 -60651839 + L1P LINE L1 4954 5059 -1087 372 292 28 96 chr20 6016367 6016702 -60651303 + L1ME LINE L1 5295 5605 -516 2329 94 0 3 chr20 6016702 6017001 -60651004 - AluSx SINE Alu -14 298 1 372 292 28 96 chr20 6017001 6017028 -60650977 + L1ME LINE L1 5605 5632 -489 273 228 49 41 chr20 6017039 6017162 -60650843 + MER113 DNA MER1_type? 8 131 -390 391 292 145 36 chr20 6017242 6017718 -60650287 - L2 LINE L2 -60 3253 2706 345 220 97 40 chr20 6017764 6017960 -60650045 + L1M4 LINE L1 4926 5137 -1009 2037 113 0 55 chr20 6017961 6018271 -60649734 - AluSq SINE Alu -17 296 4 799 161 8 8 chr20 6018308 6018432 -60649573 - AluJb SINE Alu -187 125 2 516 259 140 9 chr20 6018470 6018698 -60649307 + L1MC4 LINE L1 7781 8038 -4 1467 144 10 100 chr20 6018698 6018997 -60649008 - AluJo SINE Alu -22 290 19 595 296 96 16 chr20 6020009 6020259 -60647746 + L1MDa LINE L1 15 284 -6256 340 241 36 0 chr20 6020271 6020408 -60647597 + G-rich Low_complexity Low_complexity 3 144 0 4098 227 77 12 chr20 6020806 6022190 -60645815 + L1MDa LINE L1 792 2243 -4297 507 44 0 0 chr20 6022319 6022387 -60645618 - AluY SINE Alu -3 309 242 3201 225 87 20 chr20 6022389 6022806 -60645199 + MER21B LTR ERV1 19 407 -456 1867 118 52 4 chr20 6022806 6023101 -60644904 - AluSx SINE Alu 0 308 1 3201 225 87 20 chr20 6023101 6023473 -60644532 + MER21B LTR ERV1 407 862 -1 2533 208 91 77 chr20 6023486 6023993 -60644012 + L1MDa LINE L1 2240 2738 -3802 1514 167 15 23 chr20 6023993 6024305 -60643700 + AluJo SINE Alu 21 330 0 2533 208 91 77 chr20 6024305 6025074 -60642931 + L1MDa LINE L1 2738 3550 -2990 880 249 0 10 chr20 6025087 6025280 -60642725 + AluJb SINE Alu 120 310 -2 1177 197 80 11 chr20 6025354 6025628 -60642377 + L1MD2 LINE L1 6065 6357 -2 283 204 38 94 chr20 6025777 6025975 -60642030 - MLT1F LTR MaLR -270 139 1 2219 111 3 3 chr20 6025994 6026300 -60641705 - AluSp SINE Alu -2 311 6 2375 102 0 6 chr20 6026372 6026686 -60641319 - AluSx SINE Alu 0 312 1 1567 193 81 122 chr20 6027169 6027404 -60640601 + LTR49 LTR ERV1 5 248 -347 1672 200 0 7 chr20 6027404 6027714 -60640291 - AluJo SINE Alu -4 308 1 1567 193 81 122 chr20 6027714 6028094 -60639911 + LTR49 LTR ERV1 248 595 0 310 236 14 0 chr20 6028334 6028406 -60639599 - MER116 DNA Mariner -5 75 3 2739 105 11 6 chr20 6028419 6028781 -60639224 - THE1B LTR MaLR 0 364 1 759 227 7 0 chr20 6029087 6029241 -60638764 + MIR SINE MIR 12 166 -96 276 232 145 0 chr20 6029268 6029337 -60638668 + Tigger5 DNA MER2_type 1 79 -2244 302 258 0 0 chr20 6029339 6029405 -60638600 - Tigger5 DNA MER2_type -6 2317 2252 452 171 0 0 chr20 6029406 6029476 -60638529 + Tigger5 DNA MER2_type 2253 2322 -1 2293 96 3 10 chr20 6029511 6029814 -60638191 - AluSp SINE Alu -12 301 1 1565 158 0 8 chr20 6029818 6030072 -60637933 + AluJb SINE Alu 33 284 -28 369 0 0 0 chr20 6030072 6030113 -60637892 + (CA)n Simple_repeat Simple_repeat 2 42 0 220 270 95 32 chr20 6030792 6030918 -60637087 + MIR3 SINE MIR 64 197 -11 389 223 41 16 chr20 6031436 6031557 -60636448 - L1MC5 LINE L1 -54 7907 7784 342 0 0 0 chr20 6031557 6031595 -60636410 + (TG)n Simple_repeat Simple_repeat 1 38 0 183 186 305 0 chr20 6031603 6031662 -60636343 - MER5C DNA MER1_type 0 324 248 433 272 88 0 chr20 6031776 6031890 -60636115 - MER5C DNA MER1_type -200 124 1 614 220 69 86 chr20 6031896 6031989 -60636016 - L1MC5 LINE L1 -178 7783 7690 1760 154 0 7 chr20 6031989 6032262 -60635743 - AluJb SINE Alu -41 271 1 614 220 69 86 chr20 6032262 6032459 -60635546 - L1MC5 LINE L1 -271 7690 7498 322 284 164 0 chr20 6033247 6033363 -60634642 - LTR67 LTR ERVL -5 552 418 3741 203 24 47 chr20 6033553 6034545 -60633460 + LTR5 LTR ERVK 1 969 0 233 322 35 0 chr20 6034545 6034632 -60633373 - LTR67 LTR ERVL -370 187 98 1751 163 3 29 chr20 6034784 6035097 -60632908 - AluJo SINE Alu -6 306 2 1832 244 101 7 chr20 6035768 6036214 -60631791 - LTR16C LTR ERVL 0 491 4 2293 76 28 0 chr20 6036304 6036593 -60631412 + AluSp SINE Alu 3 299 -14 1351 50 106 0 chr20 6037478 6037688 -60630317 + AluSg/x SINE Alu 83 311 0 998 185 31 70 chr20 6037996 6038223 -60629782 + MER20 DNA MER1_type 1 218 -1 1120 115 32 0 chr20 6038602 6038759 -60629246 + U1 snRNA snRNA 1 162 -3 192 40 0 0 chr20 6038759 6038784 -60629221 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2340 69 0 33 chr20 6038786 6039092 -60628913 - AluY SINE Alu -15 296 1 2698 193 51 69 chr20 6039947 6039974 -60628031 + MER99 DNA DNA 130 156 -672 2055 129 0 0 chr20 6039974 6040276 -60627729 - AluSx SINE Alu -7 305 4 2698 193 51 69 chr20 6040276 6040562 -60627443 + MER99 DNA DNA 156 446 -382 2217 118 0 16 chr20 6040562 6040876 -60627129 - AluSx SINE Alu -3 309 1 2698 193 51 69 chr20 6040876 6041272 -60626733 + MER99 DNA DNA 446 827 -1 631 117 9 81 chr20 6042192 6042303 -60625702 - FRAM SINE Alu -75 101 1 377 238 55 93 chr20 6042878 6042970 -60625035 + MIR SINE MIR 11 105 -157 2213 103 3 39 chr20 6042970 6043282 -60624723 - AluSq SINE Alu -12 301 1 377 238 55 93 chr20 6043282 6043438 -60624567 + MIR SINE MIR 105 250 -12 1500 212 78 47 chr20 6043515 6043727 -60624278 - MLT1C LTR MaLR 0 467 263 479 84 127 0 chr20 6043727 6043798 -60624207 - MADE1 DNA Mariner 0 80 1 1500 212 78 47 chr20 6043798 6044033 -60623972 - MLT1C LTR MaLR -204 263 6 564 221 60 70 chr20 6044174 6044373 -60623632 + MER63A DNA MER1_type 1 197 -13 232 309 36 0 chr20 6044626 6044710 -60623295 + L2 LINE L2 3161 3247 -25 208 156 0 0 chr20 6044769 6044801 -60623204 + L2 LINE L2 3219 3250 -22 3240 266 60 18 chr20 6044988 6046277 -60621728 - L2 LINE L2 -27 3286 1942 7541 193 37 39 chr20 6046286 6046404 -60621601 + L1MB7 LINE L1 3347 3464 -2720 1597 192 10 20 chr20 6046404 6046701 -60621304 + AluJb SINE Alu 11 304 -8 7541 193 37 39 chr20 6046701 6049421 -60618584 + L1MB7 LINE L1 3464 6177 -7 520 292 53 19 chr20 6049434 6049643 -60618362 - MIR SINE MIR 0 262 47 2336 96 20 0 chr20 6051008 6051310 -60616695 - AluSx SINE Alu -4 308 1 183 80 0 0 chr20 6051773 6051798 -60616207 + (GGGAGA)n Simple_repeat Simple_repeat 2 26 0 1771 186 0 3 chr20 6051800 6052091 -60615914 + AluJo SINE Alu 1 290 -22 243 308 0 0 chr20 6053100 6053165 -60614840 + (TG)n Simple_repeat Simple_repeat 1 65 0 1658 225 80 40 chr20 6053589 6053623 -60614382 + L1ME2 LINE L1 5554 5585 -579 1599 188 26 3 chr20 6053623 6053926 -60614079 + AluJo SINE Alu 2 311 -1 1658 225 80 40 chr20 6053926 6054485 -60613520 + L1ME2 LINE L1 5585 6164 0 861 222 103 107 chr20 6055670 6056138 -60611867 + LTR33A LTR ERVL 7 472 -51 403 188 14 0 chr20 6056375 6056444 -60611561 + AluJ/FLAM SINE Alu 2 71 -241 180 0 0 0 chr20 6056449 6056469 -60611536 + (A)n Simple_repeat Simple_repeat 1 20 0 694 251 24 104 chr20 6056485 6056695 -60611310 + L1M4 LINE L1 4537 4693 -1453 1920 176 0 3 chr20 6056695 6057008 -60610997 + AluJb SINE Alu 1 312 0 694 251 24 104 chr20 6057008 6057247 -60610758 + L1M4 LINE L1 4693 4950 -1196 2245 93 3 0 chr20 6057248 6057539 -60610466 + AluY SINE Alu 1 292 -19 1177 204 11 8 chr20 6058063 6058323 -60609682 - L1MC4 LINE L1 0 8042 7782 375 169 0 0 chr20 6058323 6058394 -60609611 + CT-rich Low_complexity Low_complexity 2 72 0 924 136 0 0 chr20 6058394 6058526 -60609479 - AluSq/x SINE Alu -180 133 2 329 149 218 11 chr20 6058527 6058562 -60609443 - L1MC4a LINE L1 -106 7702 7676 645 14 0 0 chr20 6058562 6058636 -60609369 + (CAATA)n Simple_repeat Simple_repeat 2 75 0 329 149 218 11 chr20 6058636 6058687 -60609318 - L1MC4a LINE L1 -132 7676 7598 228 67 0 0 chr20 6061177 6061207 -60606798 + (TG)n Simple_repeat Simple_repeat 2 31 0 24 32 0 0 chr20 6061685 6061716 -60606289 + AT_rich Low_complexity Low_complexity 1 31 0 1076 141 61 5 chr20 6061739 6061937 -60606068 - L1MB7 LINE L1 0 6184 5976 2369 109 0 6 chr20 6062166 6062479 -60605526 - AluSx SINE Alu -1 311 1 29 60 0 0 chr20 6063870 6063920 -60604085 + AT_rich Low_complexity Low_complexity 1 50 0 2113 102 32 3 chr20 6064276 6064560 -60603445 - AluSg SINE Alu -18 292 1 482 214 145 0 chr20 6064565 6064696 -60603309 - L1ME3A LINE L1 -2 6168 6019 444 298 60 18 chr20 6065608 6065776 -60602229 + MIR3 SINE MIR 33 207 -1 2158 102 3 48 chr20 6066404 6066719 -60601286 + AluSq SINE Alu 5 305 -8 1479 115 8 47 chr20 6066730 6066964 -60601041 + AluSg/x SINE Alu 84 308 -4 2381 100 0 0 chr20 6067078 6067389 -60600616 + AluY SINE Alu 1 311 0 725 293 75 14 chr20 6067975 6068255 -60599750 - MER102a DNA MER1_type -32 298 2 1423 188 104 20 chr20 6068903 6069248 -60598757 - MLT1A2 LTR MaLR 0 374 1 1090 116 52 174 chr20 6069538 6069883 -60598122 - MER33 DNA MER1_type 0 324 22 231 269 75 54 chr20 6070507 6070600 -60597405 + MIR3 SINE MIR 114 208 0 588 221 104 12 chr20 6072856 6073019 -60594986 - MER5B DNA MER1_type 0 178 1 638 191 191 0 chr20 6073239 6073396 -60594609 - MER5A DNA MER1_type -2 187 1 1466 120 171 12 chr20 6074351 6074609 -60593396 + AluSg SINE Alu 2 300 0 474 18 0 0 chr20 6074616 6074671 -60593334 + (TA)n Simple_repeat Simple_repeat 1 55 0 288 0 0 0 chr20 6074670 6074702 -60593303 + (GA)n Simple_repeat Simple_repeat 2 33 0 * 2033 148 0 3 chr20 6074702 6074999 -60593006 + AluJb SINE Alu 2 297 -15 422 267 139 0 chr20 6075017 6075189 -60592816 + MIR SINE MIR 61 256 -6 504 196 65 82 chr20 6075355 6075656 -60592349 - LTR48 LTR ERV1 -6 781 378 986 170 131 5 chr20 6077876 6078082 -60589923 - MER34C LTR ERV1 -353 232 1 1138 263 24 58 chr20 6078319 6078472 -60589533 + LTR16C LTR ERVL 89 246 -245 1965 204 12 46 chr20 6078472 6078953 -60589052 - MLT1C LTR MaLR -2 465 1 1138 263 24 58 chr20 6078953 6079214 -60588791 + LTR16C LTR ERVL 246 489 -2 210 37 0 0 chr20 6079490 6079517 -60588488 + (CA)n Simple_repeat Simple_repeat 1 27 0 1496 215 111 14 chr20 6079885 6080309 -60587696 + MLT1C LTR MaLR 3 467 0 2181 105 7 3 chr20 6080546 6080840 -60587165 + AluSq SINE Alu 1 295 -18 1999 245 120 7 chr20 6080949 6081736 -60586269 - L2 LINE L2 -266 3047 2178 2010 180 42 102 chr20 6081737 6081988 -60586017 + LTR55 LTR ERV 2 267 -281 1973 131 0 11 chr20 6081988 6082270 -60585735 + AluJb SINE Alu 26 304 -8 2010 180 42 102 chr20 6082270 6082595 -60585410 + LTR55 LTR ERV 267 543 -5 814 236 51 4 chr20 6082595 6082832 -60585173 - L2 LINE L2 -1135 2179 1932 1290 163 80 64 chr20 6082967 6083280 -60584725 - MER58B DNA MER1_type 0 341 24 2161 117 3 7 chr20 6083344 6083644 -60584361 - AluSx SINE Alu -13 299 1 183 80 0 0 chr20 6083653 6083678 -60584327 + (TTTAA)n Simple_repeat Simple_repeat 2 26 0 186 71 0 0 chr20 6083988 6084016 -60583989 + (A)n Simple_repeat Simple_repeat 1 28 0 574 207 32 48 chr20 6084864 6085052 -60582953 + MER5A DNA MER1_type 3 187 -2 2175 110 10 0 chr20 6085481 6085782 -60582223 - AluSx SINE Alu -8 304 1 225 250 0 0 chr20 6086273 6086349 -60581656 + (TATATG)n Simple_repeat Simple_repeat 6 81 0 377 121 0 15 chr20 6087415 6087481 -60580524 + (TCCC)n Simple_repeat Simple_repeat 4 68 0 724 249 12 12 chr20 6087484 6087649 -60580356 - FRAM SINE Alu -1 165 1 2432 84 3 6 chr20 6087748 6088059 -60579946 + AluSg SINE Alu 1 310 0 1017 245 111 58 chr20 6088429 6088861 -60579144 + LTR16B LTR ERVL 10 464 0 1489 146 3 128 chr20 6089164 6089507 -60578498 - AluY SINE Alu 0 301 2 27 73 0 0 chr20 6092605 6092660 -60575345 + AT_rich Low_complexity Low_complexity 1 55 0 893 272 192 17 chr20 6093498 6094208 -60573797 + L2 LINE L2 2453 3299 -14 26 0 0 0 chr20 6094315 6094341 -60573664 + AT_rich Low_complexity Low_complexity 1 26 0 378 328 66 8 chr20 6094383 6094627 -60573378 - MIR SINE MIR 0 262 5 205 306 28 0 chr20 6094707 6094779 -60573226 - MIR SINE MIR -88 120 47 422 293 117 46 chr20 6095563 6095802 -60572203 - MIR SINE MIR -6 256 1 273 209 152 29 chr20 6096008 6096113 -60571892 + LTR33 LTR ERVL 366 483 -38 1291 164 24 0 chr20 6096321 6096528 -60571477 + AluJb SINE Alu 1 212 -100 660 200 0 0 chr20 6096553 6096698 -60571307 + AluSg/x SINE Alu 166 310 0 752 143 0 9 chr20 6097119 6097231 -60570774 + AluJb SINE Alu 15 125 -187 2070 96 17 43 chr20 6097618 6097919 -60570086 + AluSx SINE Alu 1 293 -19 228 164 0 49 chr20 6100032 6100093 -60567912 - L1MC2 LINE L1 -11 6333 6276 509 245 121 29 chr20 6101248 6101562 -60566443 - LTR33A LTR ERVL -16 507 307 325 309 171 6 chr20 6101664 6101839 -60566166 - LTR50 LTR ERVL -576 219 16 297 0 0 0 chr20 6101986 6102019 -60565986 + (TG)n Simple_repeat Simple_repeat 1 33 0 2509 64 0 0 chr20 6102024 6102320 -60565685 - AluY SINE Alu -15 296 1 701 255 52 14 chr20 6103302 6103514 -60564491 + MIR SINE MIR 14 233 -29 2047 117 33 10 chr20 6104314 6104614 -60563391 - AluSc SINE Alu -2 307 1 1604 148 112 11 chr20 6104963 6105240 -60562765 - AluSg1 SINE Alu -3 306 2 1219 139 93 9 chr20 6106074 6106290 -60561715 + MER46A DNA MER2_type 3 236 0 2309 83 7 0 chr20 6106638 6106927 -60561078 + AluSc SINE Alu 1 291 -18 845 268 85 55 chr20 6108056 6108238 -60559767 - L1ME3 LINE L1 -327 5835 5660 2284 79 0 0 chr20 6108238 6108518 -60559487 - AluSg SINE Alu -4 306 27 845 268 85 55 chr20 6108518 6108826 -60559179 - L1ME3 LINE L1 -502 5660 5362 985 182 0 12 chr20 6108826 6108991 -60559014 - FRAM SINE Alu -2 164 2 845 268 85 55 chr20 6108991 6109201 -60558804 - L1ME3 LINE L1 -800 5362 5098 2198 104 3 0 chr20 6109201 6109489 -60558516 + AluSp SINE Alu 1 289 -24 845 268 85 55 chr20 6109489 6109605 -60558400 - L1ME3 LINE L1 -1064 5098 4987 826 155 0 8 chr20 6109642 6109771 -60558234 + FLAM_A SINE Alu 1 128 -5 601 151 0 11 chr20 6110186 6110279 -60557726 - AluJb SINE Alu -12 300 209 855 223 178 98 chr20 6110443 6110903 -60557102 - MLT1F1 LTR MaLR 0 595 82 2973 6 0 0 chr20 6110903 6111221 -60556784 - AluYb8 SINE Alu 0 318 1 855 223 178 98 chr20 6111221 6111311 -60556694 - MLT1F1 LTR MaLR -513 82 1 2303 80 3 29 chr20 6112070 6112383 -60555622 - AluY SINE Alu -6 305 1 189 310 149 23 chr20 6112964 6113051 -60554954 - MIR SINE MIR -117 145 48 814 126 0 0 chr20 6113085 6113196 -60554809 + HY1 scRNA scRNA 1 111 -1 225 296 14 0 chr20 6114437 6114508 -60553497 - HAL1 LINE L1 -623 1884 1813 467 277 161 43 chr20 6114514 6115077 -60552928 - HAL1 LINE L1 -788 1719 992 309 244 58 12 chr20 6116619 6116659 -60551346 - MLT1L LTR MaLR -11 604 567 1417 183 71 77 chr20 6116659 6116820 -60551185 + MER58B DNA MER1_type 5 165 -2255 2382 73 3 0 chr20 6116820 6117106 -60550899 + AluSq SINE Alu 11 297 -16 1417 183 71 77 chr20 6117106 6117282 -60550723 + MER58B DNA MER1_type 165 340 -1 309 244 58 12 chr20 6117282 6117327 -60550678 - MLT1L LTR MaLR -48 567 515 548 258 71 11 chr20 6117507 6117689 -60550316 + MIR SINE MIR 12 204 -58 2260 113 0 0 chr20 6117857 6118158 -60549847 + AluSx SINE Alu 1 301 -11 839 214 66 11 chr20 6118629 6118811 -60549194 + MER58A DNA MER1_type 30 221 -3 335 193 159 11 chr20 6118835 6118923 -60549082 - LTR16C LTR ERVL 0 491 391 398 273 91 6 chr20 6119055 6119220 -60548785 - LTR16C LTR ERVL -296 195 17 1539 186 0 36 chr20 6119345 6119652 -60548353 - AluJo SINE Alu -3 309 14 1959 169 87 28 chr20 6119652 6120042 -60547963 + MER4B LTR ERV1 1 413 -197 1728 153 3 23 chr20 6120741 6121041 -60546964 - AluJb SINE Alu -5 307 14 1219 148 0 0 chr20 6121095 6121277 -60546728 - AluSg/x SINE Alu -5 305 124 2069 136 0 0 chr20 6122211 6122498 -60545507 - AluSx SINE Alu -21 291 5 1699 181 21 3 chr20 6122687 6122975 -60545030 - AluJb SINE Alu -19 293 1 428 313 50 19 chr20 6123099 6123259 -60544746 + MER5B DNA MER1_type 13 177 -1 1849 176 0 0 chr20 6123526 6123827 -60544178 + AluJo SINE Alu 3 303 -9 2545 65 0 0 chr20 6124034 6124343 -60543662 - AluY SINE Alu -2 309 1 587 134 214 36 chr20 6124582 6124694 -60543311 + AluJo/FLAM SINE Alu 2 133 -179 1641 184 13 20 chr20 6124697 6124877 -60543128 + AluJo SINE Alu 6 185 -127 2261 189 111 34 chr20 6124877 6125401 -60542604 - LTR6A LTR ERV1 0 564 1 1641 184 13 20 chr20 6125401 6125525 -60542480 + AluJo SINE Alu 185 308 -4 255 219 141 0 chr20 6125704 6125768 -60542237 - MER91B DNA MER1_type -116 74 2 501 284 204 10 chr20 6125770 6125971 -60542034 - MIR SINE MIR -17 245 6 431 248 115 73 chr20 6126144 6126378 -60541627 + MIR SINE MIR 19 262 0 280 215 183 11 chr20 6126905 6126998 -60541007 + L2 LINE L2 3198 3306 -7 1993 121 24 24 chr20 6127114 6127411 -60540594 - AluSx SINE Alu -15 297 1 3011 246 103 36 chr20 6127682 6128958 -60539047 + L2 LINE L2 1953 3313 0 1877 148 0 0 chr20 6129162 6129440 -60538565 + AluSx SINE Alu 26 303 -9 410 283 9 9 chr20 6129471 6129584 -60538421 + MER58 DNA MER1_type 2 114 -2306 238 223 117 21 chr20 6130511 6130605 -60537400 + HAL1b LINE L1 77 179 -1169 2227 116 3 0 chr20 6131966 6132267 -60535738 + AluSx SINE Alu 1 302 -10 299 309 43 12 chr20 6132329 6132491 -60535514 + L1ME4a LINE L1 5603 5769 -352 230 322 25 8 chr20 6132510 6132631 -60535374 + L1ME4a LINE L1 5835 5957 -164 2386 78 7 3 chr20 6133711 6134006 -60533999 + AluSc SINE Alu 1 296 -13 2078 129 0 3 chr20 6134098 6134393 -60533612 - AluSx SINE Alu -18 294 1 1827 148 10 10 chr20 6135371 6135674 -60532331 - AluJb SINE Alu -9 303 1 752 252 102 29 chr20 6136204 6136517 -60531488 - L1MC4a LINE L1 -1899 5909 5574 2299 102 0 3 chr20 6136726 6137021 -60530984 + AluSx SINE Alu 1 294 -18 233 189 74 82 chr20 6137116 6137238 -60530767 - L1MC4a LINE L1 -1849 5959 5839 181 279 313 25 chr20 6137453 6137654 -60530351 + MIR SINE MIR 3 261 -1 2084 119 10 0 chr20 6137668 6137963 -60530042 - AluSx SINE Alu -14 298 1 2219 111 0 13 chr20 6138616 6138923 -60529082 - AluSx SINE Alu -8 304 2 422 261 0 0 chr20 6140261 6140349 -60527656 + L2 LINE L2 3168 3255 -17 574 256 12 25 chr20 6140751 6140817 -60527188 + MIR SINE MIR 51 116 -146 521 111 0 25 chr20 6140817 6140898 -60527107 - MADE1 DNA Mariner -1 79 1 574 256 12 25 chr20 6140898 6140991 -60527014 + MIR SINE MIR 116 208 -54 280 329 13 0 chr20 6141254 6141330 -60526675 + L2 LINE L2 3160 3236 -36 204 319 106 38 chr20 6142404 6142564 -60525441 + MIR SINE MIR 65 235 -27 438 65 0 0 chr20 6143009 6143071 -60524934 + (CA)n Simple_repeat Simple_repeat 1 62 0 1459 185 10 49 chr20 6143167 6143475 -60524530 + AluJo SINE Alu 3 298 -14 545 148 32 84 chr20 6143612 6143767 -60524238 - MER58 DNA MER1_type -109 232 86 423 318 116 55 chr20 6143801 6144291 -60523714 - LTR67 LTR ERVL -15 542 23 344 297 185 0 chr20 6144291 6144513 -60523492 + HAL1b LINE L1 514 776 -572 1683 183 24 7 chr20 6144546 6144841 -60523164 + AluJo SINE Alu 1 300 -12 1081 128 0 0 chr20 6144919 6145067 -60522938 + AluSg/x SINE Alu 137 284 -26 25 0 0 0 chr20 6145232 6145257 -60522748 + AT_rich Low_complexity Low_complexity 1 25 0 229 156 178 0 chr20 6145292 6145337 -60522668 + MER74B LTR ERVL 1 53 -569 404 261 134 8 chr20 6145491 6145625 -60522380 + MER74B LTR ERVL 413 563 -59 2196 100 19 7 chr20 6145719 6146028 -60521977 - AluSp SINE Alu 0 313 1 741 211 0 8 chr20 6146033 6146161 -60521844 - FLAM_A SINE Alu -6 127 1 1319 150 146 16 chr20 6146173 6146426 -60521579 - AluJo SINE Alu -26 286 1 280 263 0 61 chr20 6146828 6146942 -60521063 + MLT2F LTR ERVL 38 144 -519 228 229 0 92 chr20 6147679 6147788 -60520217 - L1MC4 LINE L1 -1334 6708 6610 313 96 11 85 chr20 6147821 6147998 -60520007 + (TA)n Simple_repeat Simple_repeat 1 164 0 1115 203 56 36 chr20 6148200 6148506 -60519499 + MLT1D LTR MaLR 3 314 -191 2280 107 10 0 chr20 6148541 6148839 -60519166 - AluSx SINE Alu -11 301 1 1537 173 6 58 chr20 6148926 6149238 -60518767 + AluJo SINE Alu 1 296 -16 2198 160 15 0 chr20 6149616 6149948 -60518057 - MER1B DNA MER1_type 0 337 1 2006 143 13 10 chr20 6150280 6150594 -60517411 + 7SLRNA srpRNA srpRNA 1 315 -5 1008 160 0 32 chr20 6150935 6151122 -60516883 - AluJb SINE Alu -22 290 110 674 156 0 0 chr20 6151185 6151281 -60516724 - AluJ/FLAM SINE Alu -216 96 1 1975 120 0 0 chr20 6151618 6151885 -60516120 + AluSp SINE Alu 3 269 -44 242 0 61 0 chr20 6151900 6151933 -60516072 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 28 29 0 0 chr20 6152319 6152354 -60515651 + AT_rich Low_complexity Low_complexity 1 35 0 28 29 0 0 chr20 6153504 6153539 -60514466 + AT_rich Low_complexity Low_complexity 1 35 0 447 231 48 0 chr20 6153911 6154015 -60513990 + MIR SINE MIR 92 200 -62 23 33 0 0 chr20 6154062 6154092 -60513913 + AT_rich Low_complexity Low_complexity 1 30 0 2501 82 0 0 chr20 6157590 6157896 -60510109 + AluSg SINE Alu 1 306 -4 808 129 0 95 chr20 6157967 6158114 -60509891 - FLAM_C SINE Alu 0 133 1 1617 143 0 8 chr20 6159348 6159586 -60508419 + AluJo SINE Alu 67 302 -10 2126 117 13 0 chr20 6160124 6160432 -60507573 - AluSx SINE Alu 0 312 1 219 318 24 47 chr20 6160795 6160880 -60507125 - L2 LINE L2 -624 2690 2608 959 274 179 59 chr20 6160880 6161770 -60506235 - L2 LINE L2 -658 2656 1874 734 160 48 0 chr20 6161770 6161895 -60506110 - FLAM_A SINE Alu -1 132 2 959 274 179 59 chr20 6161895 6162520 -60505485 - L2 LINE L2 -1440 1874 960 681 213 86 25 chr20 6162647 6162844 -60505161 - MIR SINE MIR -2 260 52 243 363 33 0 chr20 6163046 6163137 -60504868 - Charlie8 DNA MER1_type -2132 285 192 26 50 0 0 chr20 6163329 6163369 -60504636 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr20 6163874 6163895 -60504110 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr20 6165002 6165023 -60502982 + (TG)n Simple_repeat Simple_repeat 1 21 0 616 156 0 0 chr20 6165030 6165126 -60502879 - AluJ/FLAM SINE Alu -215 97 2 510 280 95 19 chr20 6165290 6165501 -60502504 - HAL1 LINE L1 -679 1828 1602 1260 179 22 0 chr20 6165527 6165750 -60502255 - AluJb SINE Alu 0 312 85 335 325 19 0 chr20 6165751 6165911 -60502094 - HAL1 LINE L1 -912 1595 1433 1604 215 99 128 chr20 6166049 6166483 -60501522 - L1MEd LINE L1 -1317 4812 4367 2065 142 7 3 chr20 6166483 6166785 -60501220 + AluSx SINE Alu 1 303 -9 1604 215 99 128 chr20 6166785 6167190 -60500815 - L1MEd LINE L1 -1762 4367 3952 546 167 222 0 chr20 6167190 6167298 -60500707 - FLAM_C SINE Alu -10 133 2 1604 215 99 128 chr20 6167298 6167771 -60500234 - L1MEd LINE L1 -2177 3952 3433 368 135 0 0 chr20 6167936 6167988 -60500017 - MER66B LTR ERV1 -140 346 295 502 229 87 8 chr20 6167988 6168241 -60499764 - L1MEd LINE L1 -2801 3328 3056 1740 103 0 74 chr20 6168258 6168529 -60499476 - AluSx SINE Alu -61 251 1 456 156 231 0 chr20 6168549 6168735 -60499270 - Charlie5 DNA MER1_type -32 2580 2352 795 264 115 72 chr20 6168750 6169175 -60498830 - L1MEd LINE L1 -3075 3054 2649 2487 46 0 33 chr20 6169175 6169479 -60498526 - AluY SINE Alu -17 294 1 795 264 115 72 chr20 6169479 6169599 -60498406 - L1MEd LINE L1 -3480 2649 2536 2249 111 0 9 chr20 6169599 6169914 -60498091 - AluSx SINE Alu 0 312 1 795 264 115 72 chr20 6169914 6170268 -60497737 - L1MEd LINE L1 -3593 2536 2115 798 292 79 32 chr20 6170577 6170883 -60497122 - L1MEd LINE L1 -4576 1734 1444 1951 159 3 0 chr20 6170883 6171185 -60496820 - AluJb SINE Alu -9 303 1 798 292 79 32 chr20 6171185 6171958 -60496047 - L1MEd LINE L1 -4866 1444 565 653 283 97 31 chr20 6172127 6172359 -60495646 - HAL1 LINE L1 -1285 1222 1007 13866 125 51 30 chr20 6172359 6172502 -60495503 + Tigger1 DNA MER2_type 5 143 -2275 1922 163 0 10 chr20 6172502 6172803 -60495202 - AluJb SINE Alu -14 298 1 13866 125 51 30 chr20 6172803 6174850 -60493155 + Tigger1 DNA MER2_type 143 2252 -166 294 50 0 0 chr20 6174850 6174890 -60493115 + (TG)n Simple_repeat Simple_repeat 2 41 0 13866 125 51 30 chr20 6174890 6175061 -60492944 + Tigger1 DNA MER2_type 2252 2418 0 653 283 97 31 chr20 6175061 6175252 -60492753 - HAL1 LINE L1 -1500 1007 771 1249 178 31 78 chr20 6175450 6175630 -60492375 - MER58B DNA MER1_type -2081 339 152 2394 84 0 3 chr20 6175630 6175929 -60492076 - AluSx SINE Alu -11 301 4 265 0 75 0 chr20 6175931 6175971 -60492034 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 1965 132 0 24 chr20 6175974 6176262 -60491743 - AluSx SINE Alu -31 281 1 1249 178 31 78 chr20 6176262 6176367 -60491638 - MER58B DNA MER1_type -2271 149 61 278 220 180 20 chr20 6176532 6176632 -60491373 - HAL1 LINE L1 -2370 137 22 244 138 31 0 chr20 6176943 6177008 -60490997 + T-rich Low_complexity Low_complexity 4 70 0 761 220 0 0 chr20 6177188 6177320 -60490685 - MER58B DNA MER1_type -49 292 161 2207 102 20 0 chr20 6177906 6178200 -60489805 - AluSp SINE Alu -7 306 7 27 29 0 0 chr20 6178686 6178720 -60489285 + AT_rich Low_complexity Low_complexity 1 34 0 1927 141 17 3 chr20 6178989 6179279 -60488726 + AluJb SINE Alu 2 295 -17 772 182 0 0 chr20 6180913 6181045 -60486960 - FLAM_C SINE Alu 0 133 2 194 0 39 0 chr20 6181468 6181494 -60486511 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 2234 83 0 21 chr20 6181618 6181983 -60486022 - AluSq SINE Alu 0 359 1 1340 190 132 4 chr20 6182235 6182493 -60485512 - AluJb SINE Alu -21 291 1 203 310 81 35 chr20 6182545 6182632 -60485373 + MIR SINE MIR 19 109 -99 26 0 0 0 chr20 6183777 6183803 -60484202 + AT_rich Low_complexity Low_complexity 1 26 0 1261 194 0 104 chr20 6184168 6184357 -60483648 - AluY SINE Alu -11 300 160 2268 108 0 0 chr20 6184357 6184652 -60483353 - AluSx SINE Alu -17 295 1 1261 194 0 104 chr20 6184652 6184797 -60483208 - AluY SINE Alu -151 160 1 21 71 0 0 chr20 6185900 6185942 -60482063 + AT_rich Low_complexity Low_complexity 1 42 0 407 205 26 13 chr20 6187717 6187795 -60480210 - FRAM/FAM SINE Alu -92 84 6 390 21 0 0 chr20 6187805 6187852 -60480153 + (TG)n Simple_repeat Simple_repeat 2 48 0 208 269 15 30 chr20 6187905 6187972 -60480033 - MIR3 SINE MIR -24 184 119 1586 214 74 40 chr20 6188130 6188578 -60479427 + MLT1C LTR MaLR 3 465 -2 227 350 29 0 chr20 6190937 6191074 -60476931 - MIR SINE MIR -59 203 63 2267 101 3 0 chr20 6191187 6191485 -60476520 + AluSg SINE Alu 1 299 -11 484 237 75 94 chr20 6191490 6191674 -60476331 - MIR SINE MIR -1 261 82 1887 145 0 20 chr20 6191674 6191971 -60476034 + AluJo SINE Alu 1 291 -21 484 237 75 94 chr20 6191971 6192052 -60475953 - MIR SINE MIR -180 82 1 1847 157 7 13 chr20 6192171 6192476 -60475529 + AluJb SINE Alu 1 303 -9 639 182 107 58 chr20 6192763 6193026 -60474979 + MLT1J2 LTR MaLR 60 374 -72 1990 137 7 10 chr20 6193704 6194025 -60473980 + AluSx SINE Alu 1 312 0 1002 211 158 88 chr20 6194173 6194575 -60473430 - MLT1H LTR MaLR 0 549 102 1654 177 28 7 chr20 6194575 6194858 -60473147 + AluJo SINE Alu 1 289 -23 1002 211 158 88 chr20 6194858 6194968 -60473037 - MLT1H LTR MaLR -447 102 1 200 292 0 0 chr20 6195344 6195392 -60472613 + (TATG)n Simple_repeat Simple_repeat 4 51 0 289 242 194 0 chr20 6195842 6195964 -60472041 + Charlie4 DNA MER1_type 177 1774 -187 471 48 0 0 chr20 6195965 6196027 -60471978 + (CA)n Simple_repeat Simple_repeat 2 63 0 2080 124 0 20 chr20 6196052 6196350 -60471655 + AluSc SINE Alu 1 292 -17 246 261 0 15 chr20 6196354 6196419 -60471586 + Charlie4 DNA MER1_type 1898 1961 0 1069 256 80 6 chr20 6196629 6196992 -60471013 + L2 LINE L2 1890 2279 -1035 825 237 47 9 chr20 6196997 6197212 -60470793 + MIR SINE MIR 8 230 -32 205 309 18 0 chr20 6197882 6197937 -60470068 + L2 LINE L2 3134 3189 -83 389 311 24 6 chr20 6197939 6198042 -60469963 + (CAT)n Simple_repeat Simple_repeat 1 110 -57 2308 107 3 10 chr20 6198042 6198350 -60469655 - AluSq SINE Alu -7 306 1 389 311 24 6 chr20 6198350 6198410 -60469595 + (CAT)n Simple_repeat Simple_repeat 110 167 0 315 131 0 71 chr20 6198414 6198513 -60469492 + (CACCAT)n Simple_repeat Simple_repeat 6 97 0 272 248 43 60 chr20 6198535 6198652 -60469353 - MIR SINE MIR -27 235 121 345 293 47 26 chr20 6199669 6199860 -60468145 - MIR3 SINE MIR 0 208 14 461 243 155 0 chr20 6200347 6200495 -60467510 + MIR SINE MIR 3 173 -89 33 43 0 0 chr20 6203186 6203233 -60464772 + AT_rich Low_complexity Low_complexity 1 47 0 2455 109 11 22 chr20 6203244 6203603 -60464402 + THE1A LTR MaLR 1 355 0 320 133 19 133 chr20 6203652 6203757 -60464248 + L1ME4a LINE L1 5975 6067 -54 677 178 85 0 chr20 6204363 6204492 -60463513 + FLAM_C SINE Alu 1 140 -3 226 198 270 9 chr20 6205114 6205225 -60462780 - MIR SINE MIR -17 245 106 2194 118 0 16 chr20 6205281 6205585 -60462420 - AluSx SINE Alu -13 299 1 786 281 39 69 chr20 6206093 6206428 -60461577 - LTR16C LTR ERVL -5 486 162 181 302 177 10 chr20 6206621 6206717 -60461288 + L2 LINE L2 3199 3310 -3 384 270 48 48 chr20 6207079 6207205 -60460800 - MIR3 SINE MIR -1 207 82 261 374 37 0 chr20 6208480 6208587 -60459418 + L2 LINE L2 3151 3261 -11 2215 107 7 3 chr20 6208587 6208886 -60459119 + AluSq SINE Alu 1 300 -13 1889 178 93 137 chr20 6209164 6209349 -60458656 + L1ME3 LINE L1 5343 5534 -628 376 212 7 11 chr20 6209349 6209441 -60458564 - FLAM_A SINE Alu -11 122 59 1889 178 93 137 chr20 6209441 6209840 -60458165 + L1ME3 LINE L1 5534 5987 -175 880 225 117 57 chr20 6210090 6210476 -60457529 + MLT1I LTR MaLR 1 409 0 337 258 189 30 chr20 6210512 6210644 -60457361 - L2 LINE L2 0 3313 3161 37 0 0 0 chr20 6210656 6210693 -60457312 + AT_rich Low_complexity Low_complexity 1 37 0 447 261 106 29 chr20 6210902 6211109 -60456896 - L2 LINE L2 -605 2709 2487 777 178 66 116 chr20 6211109 6211275 -60456730 + MLT1D LTR MaLR 1 153 -352 2453 79 3 9 chr20 6211275 6211590 -60456415 - AluSp SINE Alu 0 313 1 777 178 66 116 chr20 6211590 6211665 -60456340 + MLT1D LTR MaLR 153 230 -275 1443 153 96 0 chr20 6211668 6211897 -60456108 + AluJb SINE Alu 1 251 -61 631 278 192 12 chr20 6211912 6212397 -60455608 - L2 LINE L2 -1010 2304 1733 2166 249 18 30 chr20 6212425 6212488 -60455517 - MLT1H1 LTR MaLR 0 555 493 3622 152 25 17 chr20 6212488 6212692 -60455313 - MER6A DNA MER2_type -260 605 404 2253 109 0 3 chr20 6212692 6212994 -60455011 + AluSg SINE Alu 1 301 -9 3622 152 25 17 chr20 6212994 6213389 -60454616 - MER6A DNA MER2_type -461 404 1 2166 249 18 30 chr20 6213389 6213825 -60454180 - MLT1H1 LTR MaLR -62 493 61 2220 100 7 3 chr20 6213825 6214126 -60453879 - AluSx SINE Alu -10 302 1 2166 249 18 30 chr20 6214126 6214187 -60453818 - MLT1H1 LTR MaLR -494 61 1 191 286 36 45 chr20 6214194 6214306 -60453699 - L2 LINE L2 -1635 1679 1569 444 266 100 57 chr20 6214974 6215057 -60452948 + MARNA DNA Mariner 129 207 -379 225 0 0 0 chr20 6215057 6215082 -60452923 + (CA)n Simple_repeat Simple_repeat 1 25 0 444 266 100 57 chr20 6215082 6215299 -60452706 + MARNA DNA Mariner 207 442 -144 302 221 53 32 chr20 6215540 6215635 -60452370 - MLT1L LTR MaLR -2 613 517 * 589 235 126 75 chr20 6215633 6215961 -60452044 - MLT1L LTR MaLR -238 288 1 1855 166 3 3 chr20 6216035 6216336 -60451669 + AluJb SINE Alu 1 301 -11 329 248 64 0 chr20 6217039 6217148 -60450857 + MIR SINE MIR 12 127 -135 636 187 216 18 chr20 6217151 6217322 -60450683 - MER63A DNA MER1_type -5 205 1 1993 107 0 0 chr20 6217783 6218035 -60449970 - AluSp SINE Alu -61 252 1 350 195 3 111 chr20 6218213 6218340 -60449665 - MLT1F1 LTR MaLR 0 567 434 1821 203 47 18 chr20 6218788 6219069 -60448936 - MLT1C LTR MaLR 0 467 167 2058 125 3 7 chr20 6219069 6219364 -60448641 - AluSq SINE Alu -19 294 1 1821 203 47 18 chr20 6219364 6219531 -60448474 - MLT1C LTR MaLR -300 167 6 442 177 0 0 chr20 6219754 6219833 -60448172 + MER96 DNA MER1_type? 97 175 0 220 118 333 0 chr20 6219834 6219885 -60448120 - MER5A DNA MER1_type -113 76 9 254 96 0 19 chr20 6220359 6220411 -60447594 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 358 221 0 0 chr20 6220443 6220511 -60447494 - FRAM SINE Alu -24 142 75 911 128 16 0 chr20 6221005 6221130 -60446875 - FLAM_C SINE Alu -16 127 1 210 23 45 45 chr20 6221197 6221241 -60446764 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 2224 80 7 0 chr20 6221248 6221524 -60446481 - AluSp SINE Alu -35 278 1 1836 145 38 7 chr20 6221852 6222142 -60445863 - AluJo SINE Alu -13 299 1 2393 77 3 16 chr20 6222310 6222621 -60445384 + AluSp SINE Alu 7 313 0 184 217 167 0 chr20 6222859 6222919 -60445086 + MIR SINE MIR 71 140 -68 198 0 0 0 chr20 6223072 6223094 -60444911 + (TG)n Simple_repeat Simple_repeat 2 23 0 2273 108 7 3 chr20 6226221 6226528 -60441477 - AluSx SINE Alu -4 308 1 860 196 17 6 chr20 6226646 6226819 -60441186 - MER5B DNA MER1_type -3 175 1 1216 138 60 112 chr20 6227040 6227308 -60440697 - AluJo SINE Alu -29 283 30 637 276 199 8 chr20 6228383 6228849 -60439156 - L2 LINE L2 -4 3309 2749 773 206 0 0 chr20 6228867 6228993 -60439012 - FLAM_C SINE Alu -14 129 4 2790 241 65 33 chr20 6228995 6229553 -60438452 - L2 LINE L2 -567 2747 2143 1369 197 88 7 chr20 6229553 6229837 -60438168 + AluJo SINE Alu 1 307 -5 2790 241 65 33 chr20 6229837 6230266 -60437739 - L2 LINE L2 -1171 2143 1729 2038 138 6 13 chr20 6231196 6231508 -60436497 - AluSx SINE Alu -2 310 1 720 144 0 0 chr20 6232095 6232206 -60435799 + FLAM_C SINE Alu 1 111 -32 201 39 0 0 chr20 6232242 6232268 -60435737 + (A)n Simple_repeat Simple_repeat 1 26 0 2009 158 3 0 chr20 6233244 6233541 -60434464 - AluSx SINE Alu -14 298 1 1934 134 17 3 chr20 6234117 6234407 -60433598 + AluSx SINE Alu 1 294 -18 2321 88 0 10 chr20 6234409 6234704 -60433301 + AluSc SINE Alu 3 294 -15 2236 112 146 8 chr20 6235101 6235477 -60432528 + MSTA LTR MaLR 1 428 0 568 272 68 19 chr20 6235481 6235687 -60432318 + MLT1H LTR MaLR 36 251 -298 2185 114 0 10 chr20 6235854 6236151 -60431854 - AluSx SINE Alu -10 302 9 2298 94 17 0 chr20 6237175 6237472 -60430533 - AluSx SINE Alu -10 302 1 266 315 43 27 chr20 6237834 6238018 -60429987 + MIR SINE MIR 44 230 -32 2325 89 0 0 chr20 6238630 6238921 -60429084 - AluSc SINE Alu -18 291 1 1039 189 82 0 chr20 6239048 6239244 -60428761 + AluJo SINE Alu 28 239 -73 28 0 0 0 chr20 6239272 6239300 -60428705 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr20 6239332 6239362 -60428643 + AT_rich Low_complexity Low_complexity 1 30 0 2189 125 3 0 chr20 6239431 6239736 -60428269 + AluSx SINE Alu 2 307 -5 2164 125 0 7 chr20 6239773 6240078 -60427927 - AluSx SINE Alu -7 305 3 1284 101 0 28 chr20 6240486 6240665 -60427340 - AluSg/x SINE Alu -13 299 126 2053 144 7 0 chr20 6240811 6241103 -60426902 + AluJb SINE Alu 1 294 -18 470 321 46 25 chr20 6241129 6241366 -60426639 - L1MEd LINE L1 -5635 484 243 28 48 0 0 chr20 6241592 6241634 -60426371 + AT_rich Low_complexity Low_complexity 1 42 0 195 302 52 42 chr20 6241648 6241744 -60426261 - MIR3 SINE MIR -28 180 84 201 305 0 0 chr20 6241775 6241834 -60426171 + CT-rich Low_complexity Low_complexity 1 59 0 2270 126 3 0 chr20 6242223 6242533 -60425472 + AluSx SINE Alu 1 311 -1 665 254 57 10 chr20 6243155 6243348 -60424657 - MIR SINE MIR -12 250 49 621 179 0 9 chr20 6243598 6243710 -60424295 - MER3 DNA MER1_type 0 209 99 264 233 105 38 chr20 6243775 6243908 -60424097 + L1ME3A LINE L1 6029 6170 0 1621 163 4 0 chr20 6244792 6245037 -60422968 + AluJb SINE Alu 1 246 -66 1976 148 7 10 chr20 6246352 6246662 -60421343 - AluJb SINE Alu -3 309 1 524 263 60 50 chr20 6246823 6247104 -60420901 + L1MB4 LINE L1 4562 4845 -1301 45 0 0 0 chr20 6247104 6247149 -60420856 + AT_rich Low_complexity Low_complexity 1 45 0 3313 172 51 22 chr20 6247298 6247669 -60420336 + L1MB4 LINE L1 5428 5826 -354 2206 107 7 7 chr20 6247669 6247968 -60420037 + AluSq SINE Alu 1 299 -14 3313 172 51 22 chr20 6247968 6248224 -60419781 + L1MB4 LINE L1 5826 6073 -107 1354 181 61 34 chr20 6248273 6248552 -60419453 + AluJo SINE Alu 12 301 -11 693 114 70 0 chr20 6248552 6248666 -60419339 + L1MB4 LINE L1 6059 6180 0 1354 181 61 34 chr20 6248666 6248679 -60419326 + AluJo SINE Alu 301 312 0 2431 176 28 24 chr20 6248683 6249177 -60418828 + L1MB7 LINE L1 5681 6176 -8 28 71 0 0 chr20 6249393 6249449 -60418556 + AT_rich Low_complexity Low_complexity 1 56 0 479 279 60 50 chr20 6249451 6249749 -60418256 + L1ME LINE L1 5258 5558 -604 2160 118 0 10 chr20 6250198 6250504 -60417501 - AluSx SINE Alu -9 303 1 328 82 0 0 chr20 6250528 6250577 -60417428 - L1MB3 LINE L1 -4 6179 6131 870 127 0 0 chr20 6250587 6250713 -60417292 - FRAM SINE Alu -23 153 28 2433 97 0 0 chr20 6250947 6251255 -60416750 + AluSx SINE Alu 5 312 0 1009 254 140 29 chr20 6251733 6252146 -60415859 - L1MC4a LINE L1 -1888 5920 5462 309 277 0 27 chr20 6252156 6252268 -60415737 - L1MC4a LINE L1 -2444 5364 5256 2192 128 0 0 chr20 6252421 6252719 -60415286 - AluSq SINE Alu -15 298 1 913 254 110 18 chr20 6253861 6254262 -60413743 + Charlie4a DNA MER1_type 3 440 -68 208 300 0 0 chr20 6254279 6254329 -60413676 + L2 LINE L2 3246 3295 -18 207 0 0 0 chr20 6254598 6254621 -60413384 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 2342 117 0 0 chr20 6255464 6255773 -60412232 + AluSg SINE Alu 1 309 -1 1281 133 27 106 chr20 6256305 6256402 -60411603 + MER46A DNA MER2_type 1 104 -2627 1980 138 0 0 chr20 6256402 6256714 -60411291 - AluSx SINE Alu 0 312 1 1281 133 27 106 chr20 6256714 6256871 -60411134 + MER46A DNA MER2_type 104 236 0 2144 117 13 13 chr20 6257076 6257375 -60410630 + AluSx SINE Alu 1 299 -13 500 185 229 13 chr20 6257480 6257637 -60410368 + MER3 DNA MER1_type 6 196 -13 2351 98 0 7 chr20 6258166 6258472 -60409533 + AluSp SINE Alu 1 304 -9 731 183 0 0 chr20 6259193 6259308 -60408697 + FLAM_A SINE Alu 1 115 -18 207 0 0 0 chr20 6259311 6259334 -60408671 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1170 142 0 0 chr20 6259484 6259653 -60408352 - AluSg/x SINE Alu -11 301 133 2271 131 0 0 chr20 6259898 6260210 -60407795 + AluSx SINE Alu 1 312 0 1812 166 3 41 chr20 6260405 6260724 -60407281 - AluJb SINE Alu -5 307 1 21 0 0 0 chr20 6261176 6261197 -60406808 + AT_rich Low_complexity Low_complexity 1 21 0 258 217 78 54 chr20 6261416 6261545 -60406460 - L1MC5 LINE L1 -46 7915 7784 2395 92 57 20 chr20 6261558 6261907 -60406098 + THE1B LTR MaLR 1 362 -2 787 231 166 21 chr20 6262065 6262452 -60405553 + LTR16C LTR ERVL 19 486 -5 194 326 163 0 chr20 6263207 6263299 -60404706 - L2 LINE L2 0 3272 3166 624 211 58 63 chr20 6263383 6263606 -60404399 + L2 LINE L2 3092 3313 0 939 92 7 21 chr20 6264781 6264923 -60403082 + L1PA7 LINE L1 6008 6147 -7 222 177 16 16 chr20 6264930 6264992 -60403013 + A-rich Low_complexity Low_complexity 2 63 0 2090 135 3 3 chr20 6264995 6265291 -60402714 + AluSq SINE Alu 1 296 -17 2222 80 0 15 chr20 6265826 6265984 -60402021 - AluSx SINE Alu -21 291 137 2251 87 0 0 chr20 6265984 6266259 -60401746 - AluSg SINE Alu -14 296 22 2222 80 0 15 chr20 6266259 6266374 -60401631 - AluSx SINE Alu -175 137 22 1175 67 0 0 chr20 6266375 6266510 -60401495 - AluSq/x SINE Alu -178 135 1 1674 219 145 46 chr20 6266510 6267099 -60400906 + L1ME3A LINE L1 5514 6160 -10 430 240 62 76 chr20 6267108 6267333 -60400672 + MER113 DNA MER1_type? 135 356 -165 2116 123 0 0 chr20 6267495 6267796 -60400209 - AluSx SINE Alu -11 301 1 237 261 0 15 chr20 6268509 6268574 -60399431 - L1ME2 LINE L1 -9 6155 6092 219 178 137 14 chr20 6269328 6269401 -60398604 - MER5A DNA MER1_type -80 109 28 2416 92 3 0 chr20 6269664 6269968 -60398037 - AluSg SINE Alu -5 305 1 441 252 59 15 chr20 6270202 6270337 -60397668 - MIR3 SINE MIR -63 145 5 244 286 10 61 chr20 6272267 6272365 -60395640 - L2 LINE L2 -1 3271 3179 345 24 0 0 chr20 6272799 6272841 -60395164 + (CA)n Simple_repeat Simple_repeat 1 42 0 1847 102 91 11 chr20 6272845 6273110 -60394895 - AluSc SINE Alu -23 286 1 398 194 14 0 chr20 6273332 6273404 -60394601 - L1ME3A LINE L1 -26 6144 6072 816 226 11 12 chr20 6273485 6273704 -60394301 - L1ME3A LINE L1 -173 5997 5835 1252 163 206 0 chr20 6273711 6273963 -60394042 - AluJo SINE Alu -8 304 1 653 208 15 8 chr20 6274681 6274811 -60393194 + AluJ SINE Alu 3 133 -179 722 40 101 0 chr20 6274823 6274922 -60393083 + L1PA11 LINE L1 6064 6172 -2 1260 134 0 21 chr20 6274927 6275113 -60392892 + AluJ SINE Alu 122 303 -9 250 257 30 40 chr20 6275986 6276087 -60391918 - L1MC4a LINE L1 -1875 5933 5834 519 281 68 51 chr20 6276091 6276326 -60391679 + LTR67 LTR ERVL 23 261 -296 31 0 0 0 chr20 6277242 6277273 -60390732 + AT_rich Low_complexity Low_complexity 1 31 0 353 250 29 10 chr20 6277489 6277593 -60390412 + MLT1H LTR MaLR 50 155 -394 1174 210 36 0 chr20 6277690 6277942 -60390063 + L1MC4a LINE L1 6737 6997 -811 246 244 93 23 chr20 6277983 6278069 -60389936 - MIR SINE MIR -148 114 23 764 254 98 10 chr20 6278119 6278312 -60389693 + MER82 DNA MER2_type 444 653 0 258 219 29 48 chr20 6278314 6278419 -60389586 + HAL1 LINE L1 2333 2435 -72 195 100 0 0 chr20 6278828 6278858 -60389147 + (TGGGGG)n Simple_repeat Simple_repeat 4 33 0 693 252 79 4 chr20 6278927 6279136 -60388869 - MIR SINE MIR -19 243 22 261 0 0 0 chr20 6279673 6279702 -60388303 + (T)n Simple_repeat Simple_repeat 1 29 0 589 267 19 0 chr20 6279874 6280035 -60387970 - L1MC4a LINE L1 -436 5685 5522 1361 190 41 14 chr20 6280511 6280801 -60387204 + MLT1C LTR MaLR 1 298 -169 1464 198 100 18 chr20 6280816 6281026 -60386979 - MLT1A1 LTR MaLR 0 365 117 2326 94 3 0 chr20 6281026 6281323 -60386682 - AluSx SINE Alu -14 298 1 1464 198 100 18 chr20 6281323 6281441 -60386564 - MLT1A1 LTR MaLR -248 117 10 409 232 120 16 chr20 6281455 6281580 -60386425 + MLT1C LTR MaLR 318 455 -12 1158 273 54 31 chr20 6282158 6282484 -60385521 + LTR16C LTR ERVL 77 415 -76 2346 117 24 24 chr20 6282484 6282859 -60385146 + THE1C LTR MaLR 1 375 0 1158 273 54 31 chr20 6282859 6282920 -60385085 + LTR16C LTR ERVL 415 473 -18 3393 165 59 50 chr20 6283122 6283796 -60384209 + MER54B LTR ERVL 1 680 -113 563 283 165 31 chr20 6284008 6284330 -60383675 - LTR16A1 LTR ERVL 0 457 93 2481 117 150 91 chr20 6284504 6284775 -60383230 - L1MA5A LINE L1 -5 6292 6038 516 101 13 0 chr20 6284775 6284854 -60383151 + MADE1 DNA Mariner 1 80 0 2481 117 150 91 chr20 6284854 6285156 -60382849 - L1MA5A LINE L1 -259 6038 5685 227 259 0 0 chr20 6285334 6285388 -60382617 - L2 LINE L2 -3 3269 3216 279 377 7 7 chr20 6285530 6285676 -60382329 + (TCCA)n Simple_repeat Simple_repeat 1 146 0 352 244 19 90 chr20 6285726 6285882 -60382123 - L2 LINE L2 0 3313 3169 234 321 110 9 chr20 6286064 6286173 -60381832 + L2 LINE L2 3147 3266 -6 1620 118 24 115 chr20 6286258 6286596 -60381409 + AluYb8 SINE Alu 1 307 -11 1862 169 0 7 chr20 6286982 6287289 -60380716 + AluJb SINE Alu 1 305 -7 236 278 58 58 chr20 6287762 6287967 -60380038 - L1ME4a LINE L1 -83 6038 5834 3368 73 11 5 chr20 6288032 6288473 -60379532 - L1PA8 LINE L1 -1 6171 5728 529 260 18 96 chr20 6288826 6288993 -60379012 - MIR SINE MIR -25 237 89 1487 104 0 0 chr20 6288993 6289204 -60378801 + L1MA2 LINE L1 6094 6304 0 529 260 18 96 chr20 6289204 6289255 -60378750 - MIR SINE MIR -173 89 36 768 179 164 24 chr20 6289534 6289741 -60378264 - MLT1K LTR MaLR -23 565 330 271 289 127 42 chr20 6289806 6289948 -60378057 - MLT1K LTR MaLR -419 169 16 363 182 265 15 chr20 6289972 6290104 -60377901 + MER5A DNA MER1_type 18 182 -7 566 261 111 56 chr20 6290261 6290495 -60377510 + MER115 DNA AcHobo 1 247 -446 1865 151 14 0 chr20 6291463 6291754 -60376251 - AluJb SINE Alu -11 301 7 1324 182 62 140 chr20 6291828 6291992 -60376013 + Charlie4a DNA MER1_type 46 221 -1740 6449 85 30 0 chr20 6291992 6292368 -60375637 - L1PA13 LINE L1 -11 6152 5789 2538 50 0 7 chr20 6292368 6292668 -60375337 - AluY SINE Alu -11 300 3 6449 85 30 0 chr20 6292668 6293741 -60374264 - L1PA13 LINE L1 -374 5789 4697 1324 182 62 140 chr20 6293741 6294035 -60373970 + Charlie4a DNA MER1_type 221 464 -1497 1975 186 80 57 chr20 6294035 6294525 -60373480 + MLT1D LTR MaLR 5 505 0 1324 182 62 140 chr20 6294525 6294565 -60373440 + Charlie4a DNA MER1_type 464 506 -2 1658 229 20 0 chr20 6294639 6294980 -60373025 - MLT1F1 LTR MaLR -8 559 212 407 133 0 0 chr20 6294975 6295035 -60372970 - MLT1F1 LTR MaLR -507 60 1 * 1080 166 0 83 chr20 6295288 6295501 -60372504 - L1MC3 LINE L1 0 7785 7593 1983 134 53 0 chr20 6295501 6295785 -60372220 - AluSx SINE Alu -13 299 1 1080 166 0 83 chr20 6295785 6295812 -60372193 - L1MC3 LINE L1 -192 7593 7565 375 264 112 0 chr20 6295908 6296033 -60371972 + MIR SINE MIR 5 143 -119 181 269 70 80 chr20 6296248 6296449 -60371556 - L2 LINE L2 -194 3078 2880 4403 169 56 8 chr20 6296459 6297318 -60370687 + MER54A LTR ERVL 2 901 0 2143 137 0 13 chr20 6298029 6298344 -60369661 - AluSq SINE Alu -2 311 1 2075 206 45 13 chr20 6299139 6299367 -60368638 - MER65C LTR ERV1 0 461 242 2722 143 2 25 chr20 6299367 6299809 -60368196 - MSTB1 LTR MaLR 0 432 1 2075 206 45 13 chr20 6299809 6300027 -60367978 - MER65C LTR ERV1 -219 242 1 14550 218 28 17 chr20 6300063 6301464 -60366541 - L1PA16 LINE L1 0 7604 6220 1807 154 57 46 chr20 6301464 6301835 -60366170 - THE1C LTR MaLR 0 375 1 14550 218 28 17 chr20 6301835 6304215 -60363790 - L1PA16 LINE L1 -1384 6220 3802 2274 112 0 7 chr20 6304215 6304520 -60363485 - AluSq SINE Alu -10 303 1 14550 218 28 17 chr20 6304520 6306138 -60361867 - L1PA16 LINE L1 -3802 3802 2204 484 293 28 22 chr20 6306405 6306586 -60361419 - L1PA16 LINE L1 -5276 2298 2117 1387 310 40 28 chr20 6306613 6307190 -60360815 - L1PA16 LINE L1 -6203 1371 788 1710 126 20 0 chr20 6307950 6308205 -60359800 + Tigger5 DNA MER2_type 2063 2322 -1 246 128 0 0 chr20 6308208 6308247 -60359758 + (TG)n Simple_repeat Simple_repeat 2 40 0 2176 206 37 57 chr20 6308253 6308460 -60359545 - L1MCb LINE L1 -4851 1194 984 1868 164 0 3 chr20 6308460 6308752 -60359253 + AluSx SINE Alu 1 291 -21 2176 206 37 57 chr20 6308752 6309519 -60358486 - L1MCb LINE L1 -5061 984 571 1286 265 46 88 chr20 6309576 6310203 -60357802 - L1MCb LINE L1 -5444 601 1 821 60 30 15 chr20 6310639 6310772 -60357233 + (TTTC)n Simple_repeat Simple_repeat 4 138 0 360 0 0 0 chr20 6310775 6310815 -60357190 + (CA)n Simple_repeat Simple_repeat 2 41 0 214 255 92 71 chr20 6312072 6312170 -60355835 - MIR SINE MIR -73 189 90 472 304 88 21 chr20 6313997 6314191 -60353814 - MIR SINE MIR -45 217 11 1884 142 14 3 chr20 6314560 6314855 -60353150 + AluSx SINE Alu 14 311 -1 1931 85 0 12 chr20 6315058 6315306 -60352699 - AluY SINE Alu -19 292 48 308 301 88 16 chr20 6315387 6315580 -60352425 - L1MB8 LINE L1 -279 5899 5693 1836 82 9 0 chr20 6315593 6315825 -60352180 - L1PA8 LINE L1 0 6172 5939 1269 270 99 13 chr20 6315880 6316273 -60351732 + LTR16B LTR ERVL 34 460 -4 31 0 0 0 chr20 6316385 6316416 -60351589 + AT_rich Low_complexity Low_complexity 1 31 0 537 215 25 0 chr20 6316416 6316537 -60351468 - L1ME3A LINE L1 -20 6150 6027 1503 191 109 56 chr20 6316562 6317019 -60350986 - MER66A LTR ERV1 0 478 97 1320 181 112 67 chr20 6317073 6317449 -60350556 - L1ME3A LINE L1 -157 6013 5621 963 168 0 19 chr20 6317456 6317617 -60350388 + FRAM SINE Alu 1 152 -24 901 222 48 77 chr20 6317684 6317995 -60350010 - LTR41 LTR ERVL -7 766 465 927 172 21 47 chr20 6318142 6318334 -60349671 - LTR41 LTR ERVL -586 187 1 2922 3 0 0 chr20 6318861 6319172 -60348833 + AluYa5 SINE Alu 1 311 0 327 141 14 84 chr20 6319662 6319687 -60348318 - LTR67 LTR ERVL 0 557 532 1621 230 100 66 chr20 6319687 6320218 -60347787 - MLT1H LTR MaLR 0 549 1 327 141 14 84 chr20 6320218 6320263 -60347742 - LTR67 LTR ERVL -25 532 492 1209 240 117 80 chr20 6320263 6320278 -60347727 - HAL1 LINE L1 -154 2353 2340 1637 121 4 0 chr20 6320278 6320509 -60347496 - AluSg/x SINE Alu 0 312 81 1209 240 117 80 chr20 6320509 6320740 -60347265 - HAL1 LINE L1 -167 2340 2119 2875 150 26 24 chr20 6320740 6321206 -60346799 + MLT1C LTR MaLR 1 467 0 1209 240 117 80 chr20 6321206 6321679 -60346326 - HAL1 LINE L1 -388 2119 1607 1436 191 83 81 chr20 6321679 6322146 -60345859 - MLT1F1 LTR MaLR -5 562 95 1002 199 129 48 chr20 6322163 6322402 -60345603 - MLT1A2 LTR MaLR -15 359 84 1986 153 0 3 chr20 6322402 6322709 -60345296 - AluSx SINE Alu -6 306 1 1002 199 129 48 chr20 6322709 6322801 -60345204 - MLT1A2 LTR MaLR -290 84 1 336 282 0 21 chr20 6322805 6322901 -60345104 - MLT1F1 LTR MaLR -466 76 1 1527 253 150 82 chr20 6322930 6323967 -60344038 - HAL1 LINE L1 -968 1539 432 276 247 68 0 chr20 6323971 6324044 -60343961 - HAL1 LINE L1 -2376 131 54 203 286 193 8 chr20 6324904 6325023 -60342982 - MER5B DNA MER1_type -35 143 3 198 238 48 16 chr20 6325326 6325389 -60342616 - MER5A DNA MER1_type -16 173 109 * 610 221 22 7 chr20 6325334 6325470 -60342535 + MER5B DNA MER1_type 25 162 -16 3713 72 5 5 chr20 6325692 6326136 -60341869 - MLT2A1 LTR ERVL 0 444 1 262 300 12 0 chr20 6327530 6327610 -60340395 - L2 LINE L2 0 3272 3192 378 0 0 0 chr20 6327691 6327733 -60340272 + (TC)n Simple_repeat Simple_repeat 2 43 0 * 486 0 0 0 chr20 6327732 6327786 -60340219 + (TA)n Simple_repeat Simple_repeat 1 54 0 967 270 98 55 chr20 6328763 6329200 -60338805 + LTR16A1 LTR ERVL 1 456 -1 933 276 87 14 chr20 6329253 6329608 -60338397 + MLT1L LTR MaLR 14 394 -221 266 281 123 9 chr20 6329637 6329751 -60338254 + MLT1L LTR MaLR 465 591 -24 180 0 0 0 chr20 6330262 6330282 -60337723 + (T)n Simple_repeat Simple_repeat 1 20 0 668 300 76 38 chr20 6330486 6330829 -60337176 + MLT1I LTR MaLR 53 408 -1 1097 315 54 10 chr20 6331302 6331708 -60336297 - LTR16C LTR ERVL 0 491 68 3235 159 27 68 chr20 6332738 6333589 -60334416 - LTR1 LTR ERV1 0 785 9 814 273 27 12 chr20 6333751 6334007 -60333998 - MIR SINE MIR -2 260 1 907 199 11 0 chr20 6334026 6334207 -60333798 + MER5A DNA MER1_type 1 183 -6 206 281 31 16 chr20 6335077 6335141 -60332864 - MER5A DNA MER1_type -1 188 124 354 176 59 209 chr20 6335190 6335308 -60332697 - MER5B DNA MER1_type -3 175 94 1533 38 0 5 chr20 6335308 6335493 -60332512 - AluY SINE Alu -5 306 123 354 176 59 209 chr20 6335493 6335561 -60332444 - MER5B DNA MER1_type -84 94 17 684 242 81 10 chr20 6335653 6335851 -60332154 + MIR SINE MIR 8 219 -43 1830 189 147 76 chr20 6335851 6336380 -60331625 - MLT1F1 LTR MaLR 0 567 1 592 215 0 0 chr20 6336511 6336618 -60331387 + MER3 DNA MER1_type 10 116 -93 775 117 0 42 chr20 6336654 6336774 -60331231 - AluSg/x SINE Alu -7 303 189 308 177 25 38 chr20 6336781 6336860 -60331145 + MER3 DNA MER1_type 132 209 0 235 233 41 14 chr20 6336799 6336872 -60331133 - MER3 DNA MER1_type -99 110 36 * 539 256 186 6 chr20 6336872 6337028 -60330977 + MER5A DNA MER1_type 6 189 0 232 254 45 0 chr20 6337180 6337247 -60330758 + L2 LINE L2 2981 3050 -222 295 287 115 8 chr20 6337430 6337552 -60330453 - MER46C DNA MER2_type -62 276 142 27191 28 1 0 chr20 6337807 6341631 -60326374 + L1PA2 LINE L1 2323 6155 0 21 0 0 0 chr20 6341982 6342003 -60326002 + AT_rich Low_complexity Low_complexity 1 21 0 1988 123 3 36 chr20 6342432 6342740 -60325265 - AluSx SINE Alu -14 298 1 291 381 42 0 chr20 6342995 6343163 -60324842 + L2 LINE L2 2217 2391 -923 1063 272 98 34 chr20 6343275 6344192 -60323813 - L1ME LINE L1 -577 5585 4616 261 308 10 0 chr20 6344283 6344387 -60323618 - L1ME LINE L1 -1810 4336 4232 2335 204 34 28 chr20 6344397 6344896 -60323109 + MLT1F1 LTR MaLR 1 502 -65 501 244 5 67 chr20 6344915 6345108 -60322897 - HAL1 LINE L1 -348 2159 1979 5681 174 17 15 chr20 6345283 6346534 -60321471 - L1MA9 LINE L1 -7 6541 5286 2382 88 0 23 chr20 6346534 6346840 -60321165 - AluSq SINE Alu -14 299 1 5681 174 17 15 chr20 6346840 6347212 -60320793 - L1MA9 LINE L1 -1262 5286 4916 1315 136 45 45 chr20 6347212 6347455 -60320550 - MSTB LTR MaLR 0 426 184 185 299 51 56 chr20 6347945 6348142 -60319863 - L3b LINE CR1 -243 1340 1145 1163 164 21 0 chr20 6351390 6351579 -60316426 - MSTB LTR MaLR -229 197 5 10337 225 63 39 chr20 6351583 6352561 -60315444 - L1MA9 LINE L1 -1462 4920 3967 186 43 0 0 chr20 6352561 6352584 -60315421 + (TTG)n Simple_repeat Simple_repeat 2 24 0 10337 225 63 39 chr20 6352584 6354424 -60313581 - L1MA9 LINE L1 -2415 3967 2173 2264 130 51 5 chr20 6354424 6354794 -60313211 - L1MA5 LINE L1 -5 6295 5909 10337 225 63 39 chr20 6354794 6354824 -60313181 - L1MA9 LINE L1 -4209 2173 2145 2619 62 0 0 chr20 6354824 6355133 -60312872 - AluY SINE Alu -2 309 1 10337 225 63 39 chr20 6355133 6356367 -60311638 - L1MA9 LINE L1 -4237 2145 814 826 342 39 24 chr20 6357072 6357484 -60310521 - L1MA9 LINE L1 -5719 594 177 300 200 0 0 chr20 6357488 6357548 -60310457 + MLT1F1 LTR MaLR 500 559 -8 683 194 8 21 chr20 6357603 6357851 -60310154 + CT-rich Low_complexity Low_complexity 1 244 0 2235 109 7 0 chr20 6358210 6358513 -60309492 + AluSq SINE Alu 1 305 -8 341 229 60 0 chr20 6358563 6358646 -60309359 + MLT1I LTR MaLR 314 401 -8 2082 103 27 3 chr20 6358877 6359169 -60308836 - AluSx SINE Alu -13 299 1 23 33 0 0 chr20 6359170 6359200 -60308805 + AT_rich Low_complexity Low_complexity 1 30 0 1130 113 0 0 chr20 6359445 6359596 -60308409 + AluSp SINE Alu 139 289 -24 880 155 0 8 chr20 6359749 6359878 -60308127 + FLAM_A SINE Alu 1 128 -5 601 151 0 11 chr20 6360293 6360386 -60307619 - AluJb SINE Alu -12 300 209 934 226 182 78 chr20 6360550 6361089 -60306916 - MLT1F1 LTR MaLR 0 595 1 3221 231 57 12 chr20 6361931 6363047 -60304958 - L1MDb LINE L1 -4606 1800 658 240 297 31 0 chr20 6363445 6363509 -60304496 + C-rich Low_complexity Low_complexity 1 66 0 254 114 0 0 chr20 6363764 6363799 -60304206 - Alu SINE Alu -264 35 1 182 250 0 18 chr20 6363800 6363856 -60304149 - MIR SINE MIR -60 202 148 2123 101 29 0 chr20 6363871 6364149 -60303856 + AluSx SINE Alu 11 296 -16 2198 114 3 3 chr20 6364584 6364882 -60303123 + AluSc SINE Alu 1 298 -11 2253 96 3 0 chr20 6364915 6365207 -60302798 + AluSx SINE Alu 1 293 -19 2216 130 3 0 chr20 6365576 6365884 -60302121 - AluSx SINE Alu -3 309 1 2170 134 0 3 chr20 6366273 6366586 -60301419 - AluSx SINE Alu 0 312 1 339 318 51 51 chr20 6366602 6366778 -60301227 + HAL1 LINE L1 2309 2484 -23 1716 178 11 3 chr20 6366876 6367162 -60300843 + AluJo SINE Alu 1 288 -24 2067 134 3 0 chr20 6367463 6367753 -60300252 - AluSx SINE Alu -21 291 1 23 0 0 0 chr20 6368166 6368189 -60299816 + AT_rich Low_complexity Low_complexity 1 23 0 185 313 136 17 chr20 6368597 6368773 -60299232 + MIR3 SINE MIR 6 202 -6 414 0 0 0 chr20 6368869 6368915 -60299090 + (CA)n Simple_repeat Simple_repeat 1 46 0 244 373 24 48 chr20 6369350 6369476 -60298529 - MIR SINE MIR -132 130 8 350 317 150 14 chr20 6370053 6370235 -60297770 - MIR SINE MIR -5 257 49 560 224 29 0 chr20 6370582 6370756 -60297249 + CT-rich Low_complexity Low_complexity 1 179 0 226 161 18 18 chr20 6370773 6370829 -60297176 + CT-rich Low_complexity Low_complexity 4 59 0 529 279 60 71 chr20 6370915 6371703 -60296302 - L1M4 LINE L1 -2018 4128 3350 357 277 117 49 chr20 6371818 6371936 -60296069 - L1M4 LINE L1 -2989 3157 3048 2998 116 12 0 chr20 6371936 6372359 -60295646 - MSTA LTR MaLR 0 428 1 357 277 117 49 chr20 6372359 6372727 -60295278 - L1M4 LINE L1 -3098 3048 2638 5637 206 2 3 chr20 6372971 6374240 -60293765 + L1 LINE L1 3868 5135 -1011 1937 186 53 3 chr20 6374696 6375073 -60292932 + MER54B LTR ERVL 103 498 -295 225 83 0 0 chr20 6375075 6375111 -60292894 + (CA)n Simple_repeat Simple_repeat 2 37 0 1033 269 44 16 chr20 6375662 6376090 -60291915 - L1MC3 LINE L1 -1639 6382 5943 258 272 126 49 chr20 6376150 6376620 -60291385 - L1MC3 LINE L1 -1567 4815 4310 6526 26 0 0 chr20 6376672 6377464 -60290541 - L1PA3 LINE L1 -3 6152 5361 1072 21 28 0 chr20 6377467 6377609 -60290396 + L1PA3 LINE L1 5213 5358 -788 584 270 152 46 chr20 6377684 6378309 -60289696 - HAL1 LINE L1 -1816 691 1 450 268 95 30 chr20 6378374 6378657 -60289348 - L1MC3 LINE L1 -3917 2467 2169 1642 102 9 4 chr20 6378662 6379432 -60288573 + L1PB1 LINE L1 5285 6151 0 2130 104 0 46 chr20 6379562 6379888 -60288117 - AluY SINE Alu 0 311 1 203 0 0 36 chr20 6379967 6379995 -60288010 + (TTA)n Simple_repeat Simple_repeat 2 28 0 369 334 135 32 chr20 6380019 6380360 -60287645 - HAL1b LINE L1 -646 1765 327 1675 200 3 22 chr20 6380377 6380692 -60287313 - AluJb SINE Alu -1 311 3 477 333 110 39 chr20 6380753 6381299 -60286706 - L1MC3 LINE L1 -4864 1508 924 1080 128 0 16 chr20 6383609 6383797 -60284208 + MER53 DNA DNA 4 188 -1 877 209 6 0 chr20 6384568 6384745 -60283260 + MER5B DNA MER1_type 1 178 0 197 255 39 20 chr20 6385003 6385054 -60282951 - L2 LINE L2 -254 3059 3008 842 239 0 16 chr20 6385081 6385265 -60282740 + MER5A DNA MER1_type 1 181 -8 1722 169 10 22 chr20 6385545 6385859 -60282146 - AluSx SINE Alu 0 312 3 642 276 24 84 chr20 6386485 6386864 -60281141 + MLT1G3 LTR MaLR 9 300 -230 201 200 0 40 chr20 6387078 6387128 -60280877 + GA-rich Low_complexity Low_complexity 4 51 0 189 159 0 0 chr20 6388239 6388283 -60279722 + A-rich Low_complexity Low_complexity 1 44 0 220 165 0 51 chr20 6388310 6388389 -60279616 + GA-rich Low_complexity Low_complexity 3 77 0 206 224 20 0 chr20 6388410 6388459 -60279546 + G-rich Low_complexity Low_complexity 4 53 0 4970 150 23 8 chr20 6390660 6391667 -60276338 + L1PA16 LINE L1 5128 6150 -16 303 329 29 22 chr20 6391700 6391837 -60276168 - L1M4c LINE L1 -3798 2584 2447 358 258 114 3 chr20 6392317 6392550 -60275455 - L1M4c LINE L1 -4653 1910 1536 769 325 133 25 chr20 6392580 6392775 -60275230 - L2 LINE L2 -1888 1426 1254 2371 93 0 10 chr20 6392775 6393085 -60274920 + AluSx SINE Alu 1 307 -5 769 325 133 25 chr20 6393085 6393183 -60274822 - L2 LINE L2 -2060 1254 1168 1544 206 62 37 chr20 6393183 6393615 -60274390 - LTR47B LTR ERVL 0 443 1 769 325 133 25 chr20 6393615 6393809 -60274196 - L2 LINE L2 -2146 1168 885 884 58 15 2 chr20 6393809 6393943 -60274062 + L1HS LINE L1 5990 6154 0 450 128 0 0 chr20 6394589 6394648 -60273357 + (GA)n Simple_repeat Simple_repeat 2 63 -16 387 0 0 0 chr20 6394648 6394691 -60273314 + (TG)n Simple_repeat Simple_repeat 1 43 0 450 128 0 0 chr20 6394691 6394709 -60273296 + (GA)n Simple_repeat Simple_repeat 62 79 0 622 190 165 6 chr20 6394765 6394923 -60273082 + MER54B LTR ERVL 1 183 -610 257 82 27 82 chr20 6395037 6395147 -60272858 + (CCCCCA)n Simple_repeat Simple_repeat 4 107 0 217 239 45 0 chr20 6395199 6395287 -60272718 + (CAAA)n Simple_repeat Simple_repeat 2 93 0 204 200 18 18 chr20 6395324 6395379 -60272626 + (CCAA)n Simple_repeat Simple_repeat 2 56 0 747 92 0 0 chr20 6395379 6395488 -60272517 + (TTCC)n Simple_repeat Simple_repeat 2 110 0 1281 160 5 0 chr20 6395488 6395694 -60272311 - AluJo SINE Alu -38 274 68 267 162 73 29 chr20 6395976 6396044 -60271961 - MLT1H LTR MaLR -25 524 454 1348 231 175 19 chr20 6396096 6396582 -60271423 + MLT1G1 LTR MaLR 22 583 -12 242 259 102 37 chr20 6396782 6396890 -60271115 - MLT1G1 LTR MaLR -465 130 16 353 326 0 0 chr20 6396906 6396998 -60271007 + L2 LINE L2 3185 3276 -37 298 329 134 51 chr20 6397060 6397352 -60270653 + L2 LINE L2 2933 3248 -24 318 266 50 79 chr20 6397605 6397744 -60270261 + MIR SINE MIR 127 261 -1 1852 158 0 11 chr20 6398104 6398383 -60269622 + AluJo SINE Alu 12 287 -25 1100 167 28 32 chr20 6399359 6399575 -60268430 + MER20 DNA MER1_type 5 219 0 1904 151 17 3 chr20 6401643 6401934 -60266071 - AluJb SINE Alu -15 297 3 798 274 134 8 chr20 6402081 6402453 -60265552 + LTR16C LTR ERVL 73 491 0 292 391 75 11 chr20 6402481 6402747 -60265258 + L2 LINE L2 2470 2752 -562 682 99 57 7 chr20 6402880 6403021 -60264984 + CT-rich Low_complexity Low_complexity 4 151 0 4507 138 33 14 chr20 6403021 6403848 -60264157 - L1MA8 LINE L1 -172 6119 5278 25 0 0 0 chr20 6404521 6404546 -60263459 + AT_rich Low_complexity Low_complexity 1 25 0 603 272 61 10 chr20 6405658 6405872 -60262133 - MIR SINE MIR -2 260 40 821 214 0 18 chr20 6406104 6406272 -60261733 - FRAM SINE Alu -14 162 1 5301 57 6 6 chr20 6406272 6406952 -60261053 - L1PA7 LINE L1 0 6154 5475 839 142 0 0 chr20 6406969 6407089 -60260916 - FLAM_C SINE Alu -13 120 1 928 216 22 0 chr20 6407578 6407759 -60260246 - MER5A DNA MER1_type -4 185 1 888 260 114 6 chr20 6408030 6408380 -60259625 + LTR33A LTR ERVL 61 448 -75 1054 172 25 0 chr20 6408432 6408630 -60259375 + MER3 DNA MER1_type 7 209 0 273 75 0 0 chr20 6409054 6409094 -60258911 + (CA)n Simple_repeat Simple_repeat 2 41 0 2404 165 14 58 chr20 6409137 6409474 -60258531 - L1MCa LINE L1 -3848 2590 2265 2196 117 7 3 chr20 6409474 6409782 -60258223 - AluSg SINE Alu -1 309 1 2404 165 14 58 chr20 6409782 6409998 -60258007 - L1MCa LINE L1 -4173 2265 2041 2110 142 31 36 chr20 6410035 6410352 -60257653 + Tigger2 DNA MER2_type 2334 2650 -68 2179 112 7 0 chr20 6410352 6410646 -60257359 + AluSx SINE Alu 1 296 -16 2110 142 31 36 chr20 6410646 6410715 -60257290 + Tigger2 DNA MER2_type 2650 2718 0 1552 127 43 49 chr20 6410716 6411339 -60256666 - L1MCa LINE L1 -4383 2043 1328 2474 126 48 10 chr20 6411347 6411759 -60256246 + MSTA LTR MaLR 1 428 0 2315 215 13 13 chr20 6411824 6412358 -60255647 - MER74A LTR ERVL -24 534 1 490 248 28 0 chr20 6413193 6413302 -60254703 + MIR SINE MIR 80 191 -71 189 0 0 0 chr20 6413444 6413465 -60254540 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1233 258 122 0 chr20 6413956 6414375 -60253630 + L1ME2 LINE L1 5686 6155 -9 425 91 0 0 chr20 6414418 6414484 -60253521 - L1P5 LINE L1 -631 5525 5460 1066 186 0 10 chr20 6414484 6414686 -60253319 + L1PA16 LINE L1 5964 6165 -1 219 36 0 0 chr20 6414693 6414721 -60253284 + (CCAA)n Simple_repeat Simple_repeat 4 31 0 1065 150 20 36 chr20 6416073 6416320 -60251685 + L1MA4 LINE L1 6055 6297 -3 894 83 35 0 chr20 6416326 6416471 -60251534 - L1P5 LINE L1 -679 5477 5328 629 191 57 0 chr20 6416655 6416812 -60251193 - L1 LINE L1 -795 5351 5186 3703 130 30 0 chr20 6416812 6417418 -60250587 + L1PB4 LINE L1 5532 6156 0 1087 206 14 106 chr20 6417708 6418141 -60249864 - LTR16A1 LTR ERVL -10 447 55 292 185 200 0 chr20 6418540 6418605 -60249400 + L2 LINE L2 3195 3272 0 350 46 62 0 chr20 6420496 6420561 -60247444 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 252 345 74 20 chr20 6421165 6421313 -60246692 - L3b LINE CR1 -205 1378 1223 368 317 8 24 chr20 6421705 6421828 -60246177 + MIR3 SINE MIR 75 195 -13 259 382 53 0 chr20 6421982 6422113 -60245892 + MIR3 SINE MIR 30 167 -41 1680 189 19 73 chr20 6422532 6422945 -60245060 + MSTD LTR MaLR 6 396 0 827 229 17 6 chr20 6423191 6423366 -60244639 - MER45A DNA AcHobo -1 177 1 2819 7 0 0 chr20 6423504 6423810 -60244195 - AluYa5 SINE Alu -5 306 1 1738 154 89 31 chr20 6424146 6424671 -60243334 + MLT2A2 LTR ERVL 1 554 0 2332 251 93 15 chr20 6425760 6426612 -60241393 + L1MC4 LINE L1 7125 8042 0 442 146 101 0 chr20 6428360 6428449 -60239556 - MLT2C2 LTR ERVL -364 100 3 492 99 0 0 chr20 6428494 6428565 -60239440 + (TA)n Simple_repeat Simple_repeat 2 72 0 621 111 0 0 chr20 6428600 6428690 -60239315 - MLT2C2 LTR ERVL -374 90 1 489 336 24 45 chr20 6429176 6429465 -60238540 - L2 LINE L2 -25 3288 3006 300 324 39 39 chr20 6429694 6429876 -60238129 - L3b LINE CR1 -131 1452 1271 1493 122 9 5 chr20 6429887 6430101 -60237904 + AluSp SINE Alu 86 300 -13 22 0 0 0 chr20 6431033 6431055 -60236950 + AT_rich Low_complexity Low_complexity 1 22 0 1077 151 26 0 chr20 6431185 6431377 -60236628 + L1PA13 LINE L1 5946 6142 -21 2071 136 25 14 chr20 6431824 6432184 -60235821 + MSTB LTR MaLR 6 369 -57 576 293 61 0 chr20 6432394 6432575 -60235430 + MIR SINE MIR 45 236 -26 185 26 0 0 chr20 6432792 6433019 -60234986 + AT_rich Low_complexity Low_complexity 1 227 0 283 279 79 21 chr20 6433557 6433697 -60234308 + MLT1J2 LTR MaLR 17 164 -286 294 157 57 14 chr20 6433863 6433933 -60234072 + MLT1I LTR MaLR 331 403 -6 198 0 0 0 chr20 6435305 6435327 -60232678 + (T)n Simple_repeat Simple_repeat 1 22 0 22 56 0 0 chr20 6435405 6435441 -60232564 + AT_rich Low_complexity Low_complexity 1 36 0 543 286 75 36 chr20 6436516 6436768 -60231237 - MER115 DNA AcHobo -72 621 360 2364 195 33 0 chr20 6436915 6437367 -60230638 - MLT1C LTR MaLR 0 467 1 437 303 8 0 chr20 6437382 6437504 -60230501 - MER115 DNA AcHobo -546 147 25 243 0 0 0 chr20 6438326 6438353 -60229652 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 1786 145 10 46 chr20 6440662 6440965 -60227040 - AluJo SINE Alu -16 296 5 259 162 0 19 chr20 6441621 6441775 -60226230 + AluJo SINE Alu 46 281 -21 25 0 0 0 chr20 6441911 6441936 -60226069 + AT_rich Low_complexity Low_complexity 1 25 0 27 49 0 0 chr20 6442116 6442157 -60225848 + AT_rich Low_complexity Low_complexity 1 41 0 1693 139 78 12 chr20 6442157 6442488 -60225517 - L1MA9 LINE L1 -1 6311 5959 267 225 0 0 chr20 6442690 6442761 -60225244 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 194 193 35 35 chr20 6443318 6443375 -60224630 - MER5A DNA MER1_type -120 69 13 250 294 143 0 chr20 6443394 6443506 -60224499 + MIR SINE MIR 34 159 -62 428 189 0 0 chr20 6443651 6443741 -60224264 + L1MA8 LINE L1 6197 6286 -5 24 0 0 0 chr20 6444891 6444915 -60223090 + AT_rich Low_complexity Low_complexity 1 24 0 332 304 108 18 chr20 6444983 6445517 -60222488 + L1MDa LINE L1 1268 1948 -4773 2241 100 0 13 chr20 6445517 6445816 -60222189 - AluSx SINE Alu -17 295 1 332 304 108 18 chr20 6445816 6445996 -60222009 + L1MDa LINE L1 1948 2110 -4611 4415 178 57 6 chr20 6446082 6446902 -60221103 - MER21B LTR ERV1 -1 862 1 351 261 146 12 chr20 6447053 6447218 -60220787 - L2 LINE L2 -1814 1500 1314 2177 113 54 41 chr20 6447245 6447636 -60220369 + MER57A LTR ERV1 8 403 0 264 331 70 86 chr20 6448312 6448569 -60219436 + L2 LINE L2 3018 3270 -2 1149 190 71 6 chr20 6448700 6449053 -60218952 - MER3 DNA MER1_type 0 2620 2245 401 167 22 0 chr20 6449070 6449160 -60218845 - MER3 DNA MER1_type -87 122 78 6081 184 27 9 chr20 6449875 6451969 -60216036 + L1MB1 LINE L1 4001 6132 -36 774 190 0 0 chr20 6452066 6452254 -60215751 - FLAM_C SINE Alu 0 189 2 664 214 38 25 chr20 6452254 6452472 -60215533 - L1MC/D LINE L1 -534 5636 5429 227 91 0 0 chr20 6452578 6452611 -60215394 + L1 LINE L1 4913 4945 -1201 371 59 0 0 chr20 6452632 6452683 -60215322 + MADE1 DNA Mariner 29 79 -1 943 288 47 23 chr20 6453988 6454466 -60213539 - MLT1G3 LTR MaLR 0 595 21 1103 217 34 8 chr20 6454690 6454953 -60213052 - MLT1H1 LTR MaLR 0 555 286 642 239 48 6 chr20 6455020 6455187 -60212818 - MLT1H1 LTR MaLR -419 176 3 195 42 0 0 chr20 6455510 6455534 -60212471 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 379 276 43 9 chr20 6455539 6455655 -60212350 - L2 LINE L2 -1 3312 3193 872 216 0 6 chr20 6456414 6456590 -60211415 - L1PB3 LINE L1 0 6154 5980 771 268 105 28 chr20 6456703 6457132 -60210873 - L1ME4a LINE L1 -44 6077 5616 988 181 9 37 chr20 6458198 6458413 -60209592 - MER3 DNA MER1_type 0 209 1 465 298 133 9 chr20 6458513 6458693 -60209312 - MIR SINE MIR 0 262 70 2131 95 0 0 chr20 6459041 6459304 -60208701 + AluSx SINE Alu 29 291 -21 245 185 74 12 chr20 6459515 6459596 -60208409 - L1MA9 LINE L1 -5 6307 6222 * 3588 144 16 15 chr20 6459565 6460230 -60207775 - L1MA7 LINE L1 -91 6200 5535 202 109 65 0 chr20 6461557 6461603 -60206402 + (TA)n Simple_repeat Simple_repeat 1 49 0 256 347 70 19 chr20 6461656 6461927 -60206078 + L3 LINE CR1 1090 1374 -203 184 286 36 0 chr20 6462009 6462065 -60205940 + MIR3 SINE MIR 151 208 0 515 291 65 4 chr20 6462820 6463050 -60204955 + LTR16A LTR ERVL 18 261 -189 386 268 46 26 chr20 6463292 6463445 -60204560 - MIR SINE MIR 0 262 107 489 32 0 0 chr20 6463839 6463901 -60204104 - L1PA16 LINE L1 -314 5852 5791 2348 128 16 13 chr20 6465184 6465566 -60202439 - L1PA15 LINE L1 0 6165 5783 539 253 175 62 chr20 6465662 6466034 -60201971 - LTR33A LTR ERVL -9 514 101 22 70 0 0 chr20 6467418 6467461 -60200544 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr20 6468457 6468480 -60199525 + AT_rich Low_complexity Low_complexity 1 23 0 28 29 0 0 chr20 6468759 6468794 -60199211 + AT_rich Low_complexity Low_complexity 1 35 0 279 275 29 0 chr20 6469044 6469113 -60198892 + polypyrimidine Low_complexity Low_complexity 5 75 0 1477 212 26 0 chr20 6469725 6470032 -60197973 - MLT1H LTR MaLR -226 323 9 3547 142 32 18 chr20 6470690 6471375 -60196630 - L1MA7 LINE L1 -51 6240 5546 1604 184 7 39 chr20 6471696 6472006 -60195999 - AluJo SINE Alu -12 300 1 1869 299 116 8 chr20 6472502 6473361 -60194644 - L2 LINE L2 -138 3175 2224 6622 202 18 4 chr20 6473380 6475178 -60192827 + L1PA15-16 LINE L1 12 1383 -5466 17941 59 11 1 chr20 6475278 6477819 -60190186 - L1P4 LINE L1 -699 5464 2898 224 261 43 0 chr20 6478085 6478154 -60189851 + L2 LINE L2 2979 3050 -222 247 287 115 8 chr20 6478337 6478459 -60189546 - MER46C DNA MER2_type -62 276 142 22999 48 1 0 chr20 6478714 6482536 -60185469 + L1PA2 LINE L1 2323 6155 0 21 0 0 0 chr20 6482887 6482908 -60185097 + AT_rich Low_complexity Low_complexity 1 21 0 1994 123 3 36 chr20 6483337 6483645 -60184360 - AluSx SINE Alu -14 298 1 928 216 22 0 chr20 6484134 6484315 -60183690 - MER5A DNA MER1_type -4 185 1 888 260 114 6 chr20 6484586 6484936 -60183069 + LTR33A LTR ERVL 61 448 -75 1054 172 25 0 chr20 6484988 6485186 -60182819 + MER3 DNA MER1_type 7 209 0 273 75 0 0 chr20 6485610 6485650 -60182355 + (CA)n Simple_repeat Simple_repeat 2 41 0 2415 165 12 58 chr20 6485693 6486031 -60181974 - L1MCa LINE L1 -3848 2590 2265 2196 117 7 3 chr20 6486031 6486339 -60181666 - AluSg SINE Alu -1 309 1 2415 165 12 58 chr20 6486339 6486555 -60181450 - L1MCa LINE L1 -4173 2265 2041 1050 128 53 11 chr20 6486564 6486772 -60181233 + Tigger2 DNA MER2_type 8 2519 -199 3352 91 11 0 chr20 6487025 6487649 -60180356 - L1PB1 LINE L1 -143 6008 5285 448 261 91 32 chr20 6487679 6487938 -60180067 + L1MCa LINE L1 2244 2511 -3917 402 278 158 53 chr20 6488003 6488628 -60179377 + HAL1 LINE L1 1 691 -1816 1072 21 28 0 chr20 6488703 6488845 -60179160 - L1PA4 LINE L1 -788 5358 5213 6630 30 0 1 chr20 6488848 6489638 -60178367 + L1PA4 LINE L1 5361 6149 -6 1944 72 0 0 chr20 6589747 6589983 -60078022 - AluY SINE Alu -75 236 1 1854 241 48 47 chr20 6590068 6591224 -60076781 - L1M2 LINE L1 -4172 2677 1574 704 342 39 24 chr20 6591923 6592335 -60075670 - L1M2 LINE L1 -5719 1060 643 275 200 0 0 chr20 6592339 6592399 -60075606 + MLT1F1 LTR MaLR 500 559 -8 723 184 0 22 chr20 6592454 6592633 -60075372 + CT-rich Low_complexity Low_complexity 2 176 0 595 226 25 3 chr20 6592673 6592960 -60075045 + CT-rich Low_complexity Low_complexity 1 293 0 550 279 59 69 chr20 6593042 6593911 -60074094 - L1M4c LINE L1 -2018 4364 3496 357 277 117 49 chr20 6593944 6594062 -60073943 - L1M4c LINE L1 -2989 3393 3284 2984 118 12 0 chr20 6594062 6594485 -60073520 - MSTA LTR MaLR 0 428 1 357 277 117 49 chr20 6594485 6594853 -60073152 - L1M4c LINE L1 -3098 3284 2874 5703 203 2 3 chr20 6595097 6596366 -60071639 + L1 LINE L1 3868 5135 -1011 258 56 0 0 chr20 6596701 6596737 -60071268 + (TGG)n Simple_repeat Simple_repeat 2 37 0 220 165 0 51 chr20 6596737 6596816 -60071189 + GA-rich Low_complexity Low_complexity 3 77 0 206 224 20 0 chr20 6596837 6596886 -60071119 + G-rich Low_complexity Low_complexity 4 53 0 4970 150 23 8 chr20 6599087 6600094 -60067911 + L1PA16 LINE L1 5128 6150 -16 303 329 29 22 chr20 6600127 6600264 -60067741 - L1M4c LINE L1 -3798 2584 2447 358 258 114 3 chr20 6600744 6600977 -60067028 - L1M4c LINE L1 -4653 1910 1536 769 325 133 25 chr20 6601007 6601202 -60066803 - L2 LINE L2 -1888 1426 1254 2371 93 0 10 chr20 6601202 6601512 -60066493 + AluSx SINE Alu 1 307 -5 769 325 133 25 chr20 6601512 6601610 -60066395 - L2 LINE L2 -2060 1254 1168 1544 206 62 37 chr20 6601610 6602042 -60065963 - LTR47B LTR ERVL 0 443 1 769 325 133 25 chr20 6602042 6602236 -60065769 - L2 LINE L2 -2146 1168 885 884 58 15 2 chr20 6602236 6602370 -60065635 + L1HS LINE L1 5990 6154 0 414 135 0 0 chr20 6603016 6603071 -60064934 + (GA)n Simple_repeat Simple_repeat 2 59 -16 387 0 0 0 chr20 6603071 6603114 -60064891 + (TG)n Simple_repeat Simple_repeat 1 43 0 414 135 0 0 chr20 6603114 6603132 -60064873 + (GA)n Simple_repeat Simple_repeat 58 75 0 2316 175 102 0 chr20 6603188 6603640 -60064365 + MER54B LTR ERVL 1 498 -295 225 83 0 0 chr20 6603642 6603678 -60064327 + (CA)n Simple_repeat Simple_repeat 2 37 0 1033 269 44 16 chr20 6604229 6604657 -60063348 - L1MC3 LINE L1 -1639 6382 5943 245 275 125 49 chr20 6604717 6605190 -60062815 - L1MC3 LINE L1 -1567 4815 4307 6530 21 1 0 chr20 6605238 6606029 -60061976 - L1PA4 LINE L1 -3 6152 5361 1072 21 28 0 chr20 6606032 6606174 -60061831 + L1PA4 LINE L1 5213 5358 -788 584 270 152 46 chr20 6606249 6606874 -60061131 - HAL1 LINE L1 -1816 691 1 450 268 95 30 chr20 6606939 6607222 -60060783 - L1MC3 LINE L1 -3917 2467 2169 1657 99 9 4 chr20 6607227 6607997 -60060008 + L1PB1 LINE L1 5285 6151 0 2112 105 0 46 chr20 6608129 6608453 -60059552 - AluY SINE Alu -2 309 1 203 0 0 36 chr20 6608532 6608560 -60059445 + (TTA)n Simple_repeat Simple_repeat 2 28 0 369 334 135 32 chr20 6608584 6608925 -60059080 - HAL1b LINE L1 -646 1765 327 1710 201 3 19 chr20 6608942 6609256 -60058749 - AluJb SINE Alu -1 311 3 465 335 110 39 chr20 6609317 6609863 -60058142 - L1MC3 LINE L1 -4864 1508 924 1080 128 0 16 chr20 6612172 6612360 -60055645 + MER53 DNA DNA 4 188 -1 866 209 6 0 chr20 6613131 6613308 -60054697 + MER5B DNA MER1_type 1 178 0 197 255 39 20 chr20 6613567 6613618 -60054387 - L2 LINE L2 -254 3059 3008 842 239 0 16 chr20 6613645 6613829 -60054176 + MER5A DNA MER1_type 1 181 -8 1749 166 10 22 chr20 6614109 6614423 -60053582 - AluSx SINE Alu 0 312 3 642 276 24 84 chr20 6615049 6615428 -60052577 + MLT1G3 LTR MaLR 9 300 -230 201 200 0 40 chr20 6615642 6615692 -60052313 + GA-rich Low_complexity Low_complexity 4 51 0 413 195 49 0 chr20 6616260 6616383 -60051622 + CT-rich Low_complexity Low_complexity 4 132 0 1120 98 0 22 chr20 6616395 6616579 -60051426 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1281 160 5 0 chr20 6616582 6616788 -60051217 - AluJo SINE Alu -38 274 68 267 162 73 29 chr20 6617070 6617138 -60050867 - MLT1H LTR MaLR -25 524 454 1348 231 175 19 chr20 6617190 6617676 -60050329 + MLT1G1 LTR MaLR 22 583 -12 242 259 102 37 chr20 6617876 6617984 -60050021 - MLT1G1 LTR MaLR -465 130 16 353 326 0 0 chr20 6618000 6618092 -60049913 + L2 LINE L2 3185 3276 -37 285 332 134 51 chr20 6618154 6618446 -60049559 + L2 LINE L2 2933 3248 -24 414 246 22 43 chr20 6618699 6618837 -60049168 + MIR SINE MIR 127 261 -1 1884 156 0 11 chr20 6619197 6619479 -60048526 + AluJo SINE Alu 12 290 -22 1100 167 28 32 chr20 6620452 6620668 -60047337 + MER20 DNA MER1_type 5 219 0 1904 151 17 3 chr20 6622736 6623027 -60044978 - AluJb SINE Alu -15 297 3 798 274 134 8 chr20 6623174 6623546 -60044459 + LTR16C LTR ERVL 73 491 0 292 391 75 11 chr20 6623574 6623840 -60044165 + L2 LINE L2 2470 2752 -562 682 99 57 7 chr20 6623973 6624114 -60043891 + CT-rich Low_complexity Low_complexity 4 151 0 4507 138 33 14 chr20 6624114 6624941 -60043064 - L1MA8 LINE L1 -172 6119 5278 25 0 0 0 chr20 6625614 6625639 -60042366 + AT_rich Low_complexity Low_complexity 1 25 0 603 272 61 10 chr20 6626751 6626965 -60041040 - MIR SINE MIR -2 260 40 821 214 0 18 chr20 6627197 6627365 -60040640 - FRAM SINE Alu -14 162 1 5301 57 6 6 chr20 6627365 6628045 -60039960 - L1PA7 LINE L1 0 6154 5475 839 142 0 0 chr20 6628062 6628182 -60039823 - FLAM_C SINE Alu -13 120 1 928 216 22 0 chr20 6628671 6628852 -60039153 - MER5A DNA MER1_type -4 185 1 888 260 114 6 chr20 6629123 6629473 -60038532 + LTR33A LTR ERVL 61 448 -75 1054 172 25 0 chr20 6629525 6629723 -60038282 + MER3 DNA MER1_type 7 209 0 273 75 0 0 chr20 6630147 6630187 -60037818 + (CA)n Simple_repeat Simple_repeat 2 41 0 2432 164 12 58 chr20 6630230 6630568 -60037437 - L1MCa LINE L1 -3848 2590 2265 2196 117 7 3 chr20 6630568 6630876 -60037129 - AluSg SINE Alu -1 309 1 2432 164 12 58 chr20 6630876 6631092 -60036913 - L1MCa LINE L1 -4173 2265 2041 2110 142 31 36 chr20 6631129 6631446 -60036559 + Tigger2 DNA MER2_type 2334 2650 -68 2271 112 0 0 chr20 6631446 6631742 -60036263 + AluSx SINE Alu 1 296 -16 2110 142 31 36 chr20 6631742 6631811 -60036194 + Tigger2 DNA MER2_type 2650 2718 0 1552 127 43 49 chr20 6631812 6632435 -60035570 - L1MCa LINE L1 -4383 2043 1328 2474 126 48 10 chr20 6632443 6632855 -60035150 + MSTA LTR MaLR 1 428 0 2315 215 13 13 chr20 6632920 6633454 -60034551 - MER74A LTR ERVL -24 534 1 490 248 28 0 chr20 6634289 6634398 -60033607 + MIR SINE MIR 80 191 -71 189 0 0 0 chr20 6634540 6634561 -60033444 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1233 258 122 0 chr20 6635052 6635471 -60032534 + L1ME2 LINE L1 5686 6155 -9 425 91 0 0 chr20 6635514 6635580 -60032425 - L1P5 LINE L1 -631 5525 5460 1066 186 0 10 chr20 6635580 6635782 -60032223 + L1PA16 LINE L1 5964 6165 -1 219 36 0 0 chr20 6635789 6635817 -60032188 + (CCAA)n Simple_repeat Simple_repeat 4 31 0 1065 150 20 36 chr20 6637169 6637416 -60030589 + L1MA4 LINE L1 6055 6297 -3 894 83 35 0 chr20 6637422 6637567 -60030438 - L1P5 LINE L1 -679 5477 5328 629 191 57 0 chr20 6637751 6637908 -60030097 - L1 LINE L1 -795 5351 5186 3703 130 30 0 chr20 6637908 6638514 -60029491 + L1PB4 LINE L1 5532 6156 0 1087 206 14 106 chr20 6638804 6639237 -60028768 - LTR16A1 LTR ERVL -10 447 55 292 185 200 0 chr20 6639636 6639701 -60028304 + L2 LINE L2 3195 3272 0 350 46 62 0 chr20 6641592 6641657 -60026348 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 252 345 74 20 chr20 6642261 6642409 -60025596 - L3b LINE CR1 -205 1378 1223 368 317 8 24 chr20 6642801 6642924 -60025081 + MIR3 SINE MIR 75 195 -13 259 382 53 0 chr20 6643078 6643209 -60024796 + MIR3 SINE MIR 30 167 -41 1680 189 19 73 chr20 6643628 6644041 -60023964 + MSTD LTR MaLR 6 396 0 827 229 17 6 chr20 6644287 6644462 -60023543 - MER45A DNA AcHobo -1 177 1 2819 7 0 0 chr20 6644600 6644906 -60023099 - AluYa5 SINE Alu -5 306 1 1738 154 89 31 chr20 6645242 6645767 -60022238 + MLT2A2 LTR ERVL 1 554 0 2332 251 93 15 chr20 6646856 6647708 -60020297 + L1MC4 LINE L1 7125 8042 0 442 146 101 0 chr20 6649460 6649549 -60018456 - MLT2C2 LTR ERVL -364 100 3 492 99 0 0 chr20 6649594 6649665 -60018340 + (TA)n Simple_repeat Simple_repeat 1 71 0 621 111 0 0 chr20 6649700 6649790 -60018215 - MLT2C2 LTR ERVL -374 90 1 489 336 24 45 chr20 6650276 6650565 -60017440 - L2 LINE L2 -25 3288 3006 300 324 39 39 chr20 6650794 6650976 -60017029 - L3b LINE CR1 -131 1452 1271 1493 122 9 5 chr20 6650987 6651201 -60016804 + AluSp SINE Alu 86 300 -13 22 0 0 0 chr20 6652133 6652155 -60015850 + AT_rich Low_complexity Low_complexity 1 22 0 1077 151 26 0 chr20 6652285 6652477 -60015528 + L1PA13 LINE L1 5946 6142 -21 2071 136 25 14 chr20 6652924 6653284 -60014721 + MSTB LTR MaLR 6 369 -57 576 293 61 0 chr20 6653494 6653675 -60014330 + MIR SINE MIR 45 236 -26 185 26 0 0 chr20 6653892 6654119 -60013886 + AT_rich Low_complexity Low_complexity 1 227 0 283 279 79 21 chr20 6654657 6654797 -60013208 + MLT1J2 LTR MaLR 17 164 -286 294 157 57 14 chr20 6654963 6655033 -60012972 + MLT1I LTR MaLR 331 403 -6 198 0 0 0 chr20 6656405 6656427 -60011578 + (T)n Simple_repeat Simple_repeat 1 22 0 22 56 0 0 chr20 6656505 6656541 -60011464 + AT_rich Low_complexity Low_complexity 1 36 0 543 286 75 36 chr20 6657616 6657868 -60010137 - MER115 DNA AcHobo -72 621 360 2364 195 33 0 chr20 6658015 6658467 -60009538 - MLT1C LTR MaLR 0 467 1 437 303 8 0 chr20 6658482 6658604 -60009401 - MER115 DNA AcHobo -546 147 25 243 0 0 0 chr20 6659426 6659453 -60008552 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 1786 145 10 46 chr20 6661762 6662065 -60005940 - AluJo SINE Alu -16 296 5 259 162 0 19 chr20 6662721 6662875 -60005130 + AluJo SINE Alu 46 281 -21 24 0 0 0 chr20 6663010 6663034 -60004971 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr20 6663214 6663255 -60004750 + AT_rich Low_complexity Low_complexity 1 41 0 1693 139 78 12 chr20 6663255 6663586 -60004419 - L1MA9 LINE L1 -1 6311 5959 267 225 0 0 chr20 6663788 6663859 -60004146 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 194 193 35 35 chr20 6664416 6664473 -60003532 - MER5A DNA MER1_type -120 69 13 250 294 143 0 chr20 6664492 6664604 -60003401 + MIR SINE MIR 34 159 -62 428 189 0 0 chr20 6664749 6664839 -60003166 + L1MA8 LINE L1 6197 6286 -5 24 0 0 0 chr20 6665989 6666013 -60001992 + AT_rich Low_complexity Low_complexity 1 24 0 332 304 108 18 chr20 6666081 6666615 -60001390 + L1MDa LINE L1 1268 1948 -4773 2241 100 0 13 chr20 6666615 6666914 -60001091 - AluSx SINE Alu -17 295 1 332 304 108 18 chr20 6666914 6667094 -60000911 + L1MDa LINE L1 1948 2110 -4611 4415 178 57 6 chr20 6667180 6668000 -60000005 - MER21B LTR ERV1 -1 862 1 351 261 146 12 chr20 6668151 6668316 -59999689 - L2 LINE L2 -1814 1500 1314 2177 113 54 41 chr20 6668343 6668734 -59999271 + MER57A LTR ERV1 8 403 0 264 331 70 86 chr20 6669410 6669667 -59998338 + L2 LINE L2 3018 3270 -2 1149 190 71 6 chr20 6669798 6670151 -59997854 - Charlie5 DNA MER1_type 0 2620 2245 401 153 24 0 chr20 6670173 6670258 -59997747 - Charlie5 DNA MER1_type -2495 117 31 6099 184 27 9 chr20 6670973 6673066 -59994939 + L1MB1 LINE L1 4001 6132 -36 774 190 0 0 chr20 6673163 6673351 -59994654 - FLAM_C SINE Alu 0 189 2 664 214 38 25 chr20 6673351 6673569 -59994436 - L1MC/D LINE L1 -534 5636 5429 227 91 0 0 chr20 6673675 6673708 -59994297 + L1 LINE L1 4913 4945 -1201 371 59 0 0 chr20 6673729 6673780 -59994225 + MADE1 DNA Mariner 29 79 -1 943 288 47 23 chr20 6675085 6675563 -59992442 - MLT1G3 LTR MaLR 0 595 21 1103 217 34 8 chr20 6675787 6676050 -59991955 - MLT1H1 LTR MaLR 0 555 286 642 239 48 6 chr20 6676117 6676284 -59991721 - MLT1H1 LTR MaLR -419 176 3 195 42 0 0 chr20 6676607 6676631 -59991374 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 379 276 43 9 chr20 6676636 6676752 -59991253 - L2 LINE L2 -1 3312 3193 872 216 0 6 chr20 6677511 6677687 -59990318 - L1PB3 LINE L1 0 6154 5980 771 268 105 28 chr20 6677800 6678229 -59989776 - L1ME4a LINE L1 -44 6077 5616 988 181 9 37 chr20 6679295 6679510 -59988495 - MER3 DNA MER1_type 0 209 1 465 298 133 9 chr20 6679610 6679790 -59988215 - MIR SINE MIR 0 262 70 2131 95 0 0 chr20 6680138 6680401 -59987604 + AluSx SINE Alu 29 291 -21 245 185 74 12 chr20 6680612 6680693 -59987312 - L1MA9 LINE L1 -5 6307 6222 * 3588 144 16 15 chr20 6680662 6681327 -59986678 - L1MA7 LINE L1 -91 6200 5535 202 109 65 0 chr20 6682654 6682700 -59985305 + (TA)n Simple_repeat Simple_repeat 2 50 0 256 347 70 19 chr20 6682753 6683024 -59984981 + L3 LINE CR1 1090 1374 -203 184 286 36 0 chr20 6683106 6683162 -59984843 + MIR3 SINE MIR 151 208 0 538 287 65 4 chr20 6683917 6684147 -59983858 + LTR16A LTR ERVL 18 261 -189 384 268 46 26 chr20 6684389 6684542 -59983463 - MIR SINE MIR 0 262 107 489 32 0 0 chr20 6684936 6684998 -59983007 - L1PA16 LINE L1 -314 5852 5791 2348 128 16 13 chr20 6686282 6686664 -59981341 - L1PA15 LINE L1 0 6165 5783 539 253 175 62 chr20 6686760 6687132 -59980873 - LTR33A LTR ERVL -9 514 101 22 70 0 0 chr20 6688508 6688551 -59979454 + AT_rich Low_complexity Low_complexity 1 43 0 23 0 0 0 chr20 6689547 6689570 -59978435 + AT_rich Low_complexity Low_complexity 1 23 0 28 29 0 0 chr20 6689849 6689884 -59978121 + AT_rich Low_complexity Low_complexity 1 35 0 279 275 29 0 chr20 6690134 6690203 -59977802 + polypyrimidine Low_complexity Low_complexity 5 75 0 1477 212 26 0 chr20 6690815 6691122 -59976883 - MLT1H LTR MaLR -226 323 9 3529 143 32 18 chr20 6691781 6692466 -59975539 - L1MA7 LINE L1 -51 6240 5546 1604 184 7 39 chr20 6692787 6693097 -59974908 - AluJo SINE Alu -12 300 1 1886 297 116 8 chr20 6693593 6694452 -59973553 - L2 LINE L2 -138 3175 2224 12638 173 23 5 chr20 6694471 6698050 -59969955 + L1PA15-16 LINE L1 12 3219 -3630 569 176 162 0 chr20 6698094 6698236 -59969769 - MER7A DNA MER2_type -182 164 2 1375 168 21 32 chr20 6698236 6698516 -59969489 - Tigger3(Golem) DNA MER2_type -2752 277 1 40668 34 23 2 chr20 6699220 6705243 -59962762 - L1PA2 LINE L1 0 6155 3 2286 79 16 7 chr20 6705336 6705641 -59962364 - AluY SINE Alu -3 308 1 946 175 0 11 chr20 6706568 6706751 -59961254 + MER82 DNA MER2_type 23 203 -450 396 125 0 0 chr20 6706752 6706816 -59961189 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 1642 245 48 5 chr20 6706819 6707239 -59960766 + MER82 DNA MER2_type 212 649 -4 663 223 8 0 chr20 6707329 6707450 -59960555 + FLAM_C SINE Alu 1 122 -21 478 162 38 0 chr20 6707573 6707678 -59960327 + L1MC4a LINE L1 5648 5756 -408 385 276 24 8 chr20 6707822 6707949 -59960056 + L1MC4a LINE L1 5741 5869 -1939 5246 157 38 11 chr20 6708192 6709780 -59958225 + L1PA16 LINE L1 4536 6157 -9 210 218 0 58 chr20 6709990 6710077 -59957928 + T-rich Low_complexity Low_complexity 2 83 0 2306 133 3 5 chr20 6710107 6710476 -59957529 - L1PB1 LINE L1 -1 6150 5783 574 88 0 85 chr20 6710497 6710806 -59957199 + (TA)n Simple_repeat Simple_repeat 1 282 0 236 108 0 0 chr20 6710807 6710844 -59957161 + L1P4 LINE L1 5782 5818 -345 * 239 232 0 0 chr20 6710843 6710899 -59957106 - L1 LINE L1 -2139 4007 3952 518 162 0 36 chr20 6710918 6711118 -59956887 + (TA)n Simple_repeat Simple_repeat 1 192 0 14379 184 58 32 chr20 6711118 6717452 -59950553 - L1P5 LINE L1 -360 6507 6 319 292 115 49 chr20 6718060 6718451 -59949554 - HAL1 LINE L1 -762 1745 1329 322 270 40 48 chr20 6718468 6718594 -59949411 - L1MEd LINE L1 -4971 1148 1024 288 165 0 155 chr20 6718643 6718746 -59949259 + L1ME3 LINE L1 5949 6035 -127 2288 103 7 0 chr20 6719517 6719818 -59948187 - AluSp SINE Alu -10 303 1 612 188 16 8 chr20 6719874 6720002 -59948003 - MER45R DNA AcHobo -1 1580 1452 720 199 0 7 chr20 6720185 6720336 -59947669 - L1MB3 LINE L1 -2 6181 6032 510 162 8 17 chr20 6720340 6720457 -59947548 - MER45R DNA AcHobo -99 1482 1367 2940 39 0 0 chr20 6720557 6720912 -59947093 - L1PA4 LINE L1 -3 6152 5798 1224 233 78 8 chr20 6720912 6721273 -59946732 + MLT1C LTR MaLR 82 467 0 4491 228 27 54 chr20 6721273 6722686 -59945319 - MER45R DNA AcHobo -206 1375 1 30 27 0 0 chr20 6722904 6722941 -59945064 + AT_rich Low_complexity Low_complexity 1 37 0 1760 168 25 7 chr20 6722943 6723228 -59944777 - AluJo SINE Alu -22 290 1 14587 131 16 13 chr20 6726069 6728478 -59939527 - Tigger1 DNA MER2_type -1 2417 1 2675 115 44 0 chr20 6728662 6729072 -59938933 - MSTA LTR MaLR 0 428 1 2317 86 7 3 chr20 6730561 6730862 -59937143 + AluSc SINE Alu 1 302 -7 201 384 14 0 chr20 6732952 6733049 -59934956 + MIR SINE MIR 56 144 -64 208 225 0 0 chr20 6733089 6733129 -59934876 + CT-rich Low_complexity Low_complexity 3 42 0 1579 239 66 8 chr20 6733141 6733455 -59934550 + MER90 LTR ERV1 1 295 -319 2599 46 0 0 chr20 6733455 6733758 -59934247 - AluY SINE Alu -8 303 1 1579 239 66 8 chr20 6733758 6733935 -59934070 + MER90 LTR ERV1 295 614 0 196 319 97 49 chr20 6734039 6734183 -59933822 + MIR3 SINE MIR 53 203 -5 328 313 92 12 chr20 6734754 6734917 -59933088 - MIR SINE MIR -16 246 71 2528 65 3 0 chr20 6734974 6735284 -59932721 - AluY SINE Alu 0 311 1 738 272 75 8 chr20 6735541 6735809 -59932196 + MLT1B LTR MaLR 65 350 -40 2307 231 12 12 chr20 6735861 6736375 -59931630 + MLT1F LTR MaLR 24 537 -5 2100 193 0 48 chr20 6736472 6736697 -59931308 + MER63B DNA MER1_type 1 194 -868 1630 202 7 10 chr20 6736697 6736989 -59931016 + AluJb SINE Alu 6 296 -16 2100 193 0 48 chr20 6736989 6737218 -59930787 + MER63B DNA MER1_type 194 433 -3 416 301 196 0 chr20 6737706 6737879 -59930126 + MIR SINE MIR 56 262 0 303 260 27 107 chr20 6738573 6738723 -59929282 + MIR SINE MIR 91 228 -34 1006 259 73 34 chr20 6739829 6740239 -59927766 + LTR16A LTR ERVL 25 450 0 1645 163 123 30 chr20 6740583 6740981 -59927024 + MER63B DNA MER1_type 2 436 0 407 273 47 40 chr20 6742527 6742592 -59925413 - MIR SINE MIR -62 200 137 1724 160 31 82 chr20 6742592 6743017 -59924988 + MER57A LTR ERV1 1 403 0 407 273 47 40 chr20 6743017 6743101 -59924904 - MIR SINE MIR -125 137 50 777 239 104 63 chr20 6743250 6743665 -59924340 + MER50 LTR ERV1 10 441 -293 1026 207 28 26 chr20 6743669 6744029 -59923976 - L1ME LINE L1 -627 5535 5175 26 0 0 0 chr20 6744029 6744055 -59923950 + AT_rich Low_complexity Low_complexity 1 26 0 4266 109 14 5 chr20 6744057 6744691 -59923314 - L1PA14 LINE L1 -17 6144 5505 286 244 96 0 chr20 6744692 6744827 -59923178 - L1ME LINE L1 -960 5186 5039 2382 94 0 3 chr20 6744884 6745193 -59922812 - AluY SINE Alu -3 308 1 497 210 18 27 chr20 6745259 6745427 -59922578 - L1ME LINE L1 -1100 5046 4876 1867 254 138 40 chr20 6745664 6746459 -59921546 + L2 LINE L2 1417 2289 -1025 332 209 23 12 chr20 6746967 6747053 -59920952 - LTR16C LTR ERVL -2 489 403 1073 360 108 2 chr20 6747283 6747914 -59920091 + L2 LINE L2 952 1649 -1665 311 230 65 101 chr20 6747915 6748054 -59919951 - L1ME LINE L1 -409 5755 5622 530 218 98 36 chr20 6748055 6748248 -59919757 + MLT1J2 LTR MaLR 2 206 -244 709 276 41 16 chr20 6748400 6748790 -59919215 - L1ME LINE L1 -538 5626 5226 7873 138 22 18 chr20 6748838 6751409 -59916596 - L1MA3 LINE L1 0 6305 3725 1724 196 5 7 chr20 6751406 6751820 -59916185 + L1 LINE L1 2957 3369 -2777 * 971 205 45 68 chr20 6752188 6752480 -59915525 + MLT2D LTR ERVL 86 370 -44 333 68 0 0 chr20 6752480 6752524 -59915481 + (CA)n Simple_repeat Simple_repeat 2 45 0 971 205 45 68 chr20 6752524 6752568 -59915437 + MLT2D LTR ERVL 370 414 0 536 341 24 0 chr20 6753047 6753258 -59914747 + MIR SINE MIR 47 262 0 572 248 8 0 chr20 6753291 6753416 -59914589 - L2 LINE L2 -1 3312 3187 655 269 196 16 chr20 6753527 6753899 -59914106 - MLT1H LTR MaLR -110 439 1 1718 192 126 21 chr20 6755161 6755348 -59912657 + MLT1C LTR MaLR 1 167 -300 387 60 0 0 chr20 6755348 6755398 -59912607 + (CA)n Simple_repeat Simple_repeat 2 51 0 1718 192 126 21 chr20 6755398 6755632 -59912373 + MLT1C LTR MaLR 167 466 -1 265 282 24 12 chr20 6755814 6755899 -59912106 + LTR16A1 LTR ERVL 1 86 -371 672 194 71 0 chr20 6755983 6756138 -59911867 + LTR16A1 LTR ERVL 242 407 -50 2274 102 3 0 chr20 6756980 6757275 -59910730 - AluSg SINE Alu -14 296 1 819 297 68 12 chr20 6757431 6757879 -59910126 - L1MC4a LINE L1 -139 5982 5513 801 175 48 12 chr20 6757905 6758071 -59909934 + MER58A DNA MER1_type 42 213 -11 438 133 0 0 chr20 6758075 6758150 -59909855 + L1M2 LINE L1 5710 5784 -528 380 189 0 0 chr20 6758152 6758226 -59909779 + L1PA15 LINE L1 6087 6160 -5 327 299 45 38 chr20 6758231 6758388 -59909617 + L1 LINE L1 3275 3432 -2714 2545 181 7 0 chr20 6758775 6759239 -59908766 + L1PA16 LINE L1 5694 6160 -6 1531 209 49 49 chr20 6759239 6759735 -59908270 + L1MA9 LINE L1 5776 6274 -38 352 250 144 101 chr20 6760076 6760520 -59907485 - L1MC4a LINE L1 -1083 5063 4601 503 216 0 72 chr20 6760521 6760660 -59907345 + MLT1H LTR MaLR 223 351 -198 210 118 0 0 chr20 6760951 6760985 -59907020 + (T)n Simple_repeat Simple_repeat 1 34 0 2549 58 3 0 chr20 6761016 6761342 -59906663 - L1PA5 LINE L1 -13 6141 5815 526 252 161 56 chr20 6761803 6762144 -59905861 + MLT1J1 LTR MaLR 70 446 0 4775 155 38 8 chr20 6762386 6763362 -59904643 + L1PA16 LINE L1 5171 6166 0 360 172 107 25 chr20 6763369 6763491 -59904514 + Charlie1 DNA MER1_type 2470 2601 -160 548 296 65 26 chr20 6763857 6764165 -59903840 + LTR16C LTR ERVL 169 488 -3 274 246 0 0 chr20 6764399 6764456 -59903549 - L2 LINE L2 -9 3263 3207 182 179 77 0 chr20 6764741 6764780 -59903225 + MIR SINE MIR 203 244 -18 * 193 229 62 0 chr20 6764746 6764794 -59903211 + L2 LINE L2 3256 3306 -7 485 248 18 0 chr20 6765210 6765323 -59902682 - MIR SINE MIR -117 145 31 184 286 0 52 chr20 6765929 6766006 -59901999 - L2 LINE L2 0 3313 3241 457 276 106 35 chr20 6768317 6768388 -59899617 - MIR SINE MIR -11 251 186 4061 122 19 0 chr20 6768388 6769010 -59898995 + MER41B LTR ERV1 1 634 -1 457 276 106 35 chr20 6769010 6769108 -59898897 - MIR SINE MIR -76 186 70 2163 161 108 33 chr20 6769562 6769619 -59898386 - LTR49 LTR ERV1 -8 587 536 2015 122 31 0 chr20 6769619 6769907 -59898098 + AluSx SINE Alu 1 297 -15 2163 161 108 33 chr20 6769907 6770102 -59897903 - LTR49 LTR ERV1 -59 536 357 2784 93 3 11 chr20 6770102 6770480 -59897525 + THE1C LTR MaLR 1 375 0 2163 161 108 33 chr20 6770480 6770772 -59897233 - LTR49 LTR ERV1 -238 357 1 415 184 145 95 chr20 6771451 6771630 -59896375 - MER5A DNA MER1_type -1 188 1 2092 270 54 22 chr20 6773097 6773726 -59894279 + MLT2F LTR ERVL 1 649 -14 2369 65 10 0 chr20 6773992 6774284 -59893721 + AluY SINE Alu 1 295 -16 265 250 50 0 chr20 6775235 6775315 -59892690 - MIR SINE MIR -55 207 124 956 236 97 8 chr20 6775706 6775959 -59892046 + MLT1G LTR MaLR 1 280 -310 294 29 0 0 chr20 6776130 6776165 -59891840 + (CCTA)n Simple_repeat Simple_repeat 1 35 0 2932 107 49 0 chr20 6776350 6776782 -59891223 - MLT2A2 LTR ERVL 0 453 1 409 218 0 122 chr20 6777303 6777415 -59890590 - L1ME3 LINE L1 -167 5995 5906 2111 100 27 10 chr20 6777415 6777716 -59890289 - AluSx SINE Alu -6 306 1 409 218 0 122 chr20 6777716 6777759 -59890246 - L1ME3 LINE L1 -256 5906 5859 503 320 39 6 chr20 6778903 6779081 -59888924 - MIR SINE MIR -55 207 24 587 269 75 28 chr20 6779657 6780018 -59887987 - HAL1 LINE L1 -114 2393 2016 357 277 20 0 chr20 6780063 6780164 -59887841 - HAL1 LINE L1 -757 1750 1648 313 180 49 0 chr20 6780171 6780232 -59887773 - MER5A DNA MER1_type -77 112 49 573 273 145 68 chr20 6780304 6781387 -59886618 - HAL1 LINE L1 -1293 1214 49 428 356 75 62 chr20 6782803 6782965 -59885040 - L2 LINE L2 0 3272 3113 1591 178 58 3 chr20 6782965 6783257 -59884748 + AluJo SINE Alu 1 308 -4 428 356 75 62 chr20 6783257 6783496 -59884509 - L2 LINE L2 -159 3113 2866 617 307 45 31 chr20 6783949 6784239 -59883766 + LTR16C LTR ERVL 188 481 -10 295 290 70 10 chr20 6784573 6784673 -59883332 + L2 LINE L2 3166 3271 -1 449 346 53 5 chr20 6786554 6786762 -59881243 - MIR SINE MIR -5 257 40 210 366 59 0 chr20 6787419 6787520 -59880485 + MIR SINE MIR 30 136 -72 339 25 0 0 chr20 6787581 6787621 -59880384 + (CA)n Simple_repeat Simple_repeat 2 41 0 2755 253 87 10 chr20 6788583 6789661 -59878344 - L1ME3A LINE L1 -11 6228 5065 684 261 40 0 chr20 6789710 6789959 -59878046 - L1ME3A LINE L1 -1429 4786 4528 2010 142 0 3 chr20 6790134 6790430 -59877575 + AluSx SINE Alu 1 295 -17 1408 244 60 38 chr20 6790432 6790904 -59877101 - L1ME1 LINE L1 -11 6155 5670 2211 114 3 0 chr20 6790904 6791201 -59876804 - AluSx SINE Alu -14 298 1 1408 244 60 38 chr20 6791201 6791225 -59876780 - L1ME1 LINE L1 -496 5670 5648 861 230 62 22 chr20 6791222 6791541 -59876464 + L1ME LINE L1 5228 5558 -608 * 21 36 0 0 chr20 6791541 6791569 -59876436 + AT_rich Low_complexity Low_complexity 1 28 0 2004 171 59 10 chr20 6791569 6791973 -59876032 + MSTB LTR MaLR 3 426 0 680 332 24 0 chr20 6792021 6792313 -59875692 - L1ME3A LINE L1 -4584 1812 1514 324 265 59 59 chr20 6793195 6793331 -59874674 + MIR SINE MIR 20 155 -107 229 316 8 23 chr20 6793337 6793470 -59874535 + GA-rich Low_complexity Low_complexity 1 131 0 186 273 0 0 chr20 6793501 6793545 -59874460 + L2 LINE L2 3219 3262 -10 5023 127 17 6 chr20 6793740 6793917 -59874088 + L1MA5 LINE L1 5464 5638 -662 1088 188 30 0 chr20 6793917 6794119 -59873886 + MER6B DNA MER2_type 3 210 0 5023 127 17 6 chr20 6794119 6794769 -59873236 + L1MA5 LINE L1 5638 6300 0 294 274 12 54 chr20 6795336 6795504 -59872501 + GA-rich Low_complexity Low_complexity 3 163 0 1078 187 23 14 chr20 6796000 6796214 -59871791 - MER20 DNA MER1_type 0 219 4 694 182 0 0 chr20 6796317 6796427 -59871578 - FLAM_A SINE Alu -17 125 16 1019 269 61 17 chr20 6796607 6796904 -59871101 - LTR16C LTR ERVL -1 490 181 2462 181 14 45 chr20 6796907 6797421 -59870584 + MLT1D LTR MaLR 7 504 -1 2335 200 31 20 chr20 6797422 6797966 -59870039 + MLT1D-int LTR MaLR 1 550 -821 1287 186 35 64 chr20 6797966 6798278 -59869727 + MLT1D LTR MaLR 125 427 -78 239 217 29 0 chr20 6798285 6798354 -59869651 + (TA)n Simple_repeat Simple_repeat 2 72 0 568 253 71 0 chr20 6798695 6798865 -59869140 - LTR33A LTR ERVL -54 469 288 205 283 123 9 chr20 6799101 6799207 -59868798 - L2 LINE L2 -369 2944 2827 1521 249 71 48 chr20 6799585 6800063 -59867942 - LTR33 LTR ERVL -14 507 19 708 122 320 0 chr20 6801301 6801448 -59866557 + MER3 DNA MER1_type 9 202 -7 201 298 0 0 chr20 6801549 6801596 -59866409 + polypurine Low_complexity Low_complexity 6 52 0 265 356 54 27 chr20 6801911 6802060 -59865945 + MIR3 SINE MIR 42 194 -14 27 0 0 0 chr20 6802662 6802689 -59865316 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr20 6802852 6802876 -59865129 + AT_rich Low_complexity Low_complexity 1 24 0 675 301 73 56 chr20 6803054 6803636 -59864369 - L1ME2 LINE L1 -280 5884 5284 201 311 87 29 chr20 6804382 6804485 -59863520 + MIR SINE MIR 46 154 -108 357 234 52 0 chr20 6805380 6805457 -59862548 - L2 LINE L2 -5 3267 3187 619 325 71 27 chr20 6806683 6807314 -59860691 + L1MEd LINE L1 907 1652 -838 2297 106 0 0 chr20 6807535 6807836 -59860169 - AluSq SINE Alu -12 301 1 24 0 0 0 chr20 6807843 6807867 -59860138 + AT_rich Low_complexity Low_complexity 1 24 0 2090 128 13 0 chr20 6808189 6808493 -59859512 + AluSx SINE Alu 1 308 -4 21 36 0 0 chr20 6808667 6808695 -59859310 + AT_rich Low_complexity Low_complexity 1 28 0 210 235 20 10 chr20 6809343 6809441 -59858564 + (TA)n Simple_repeat Simple_repeat 1 99 0 211 200 54 23 chr20 6809456 6809586 -59858419 + CT-rich Low_complexity Low_complexity 2 135 0 476 223 18 6 chr20 6809606 6809772 -59858233 + CT-rich Low_complexity Low_complexity 2 169 0 9085 103 7 15 chr20 6810485 6811163 -59856842 - HSMAR1 DNA Mariner -2 1285 622 2438 85 0 0 chr20 6811163 6811470 -59856535 + AluSx SINE Alu 1 307 -5 9085 103 7 15 chr20 6811470 6812087 -59855918 - HSMAR1 DNA Mariner -665 622 1 1609 40 25 0 chr20 6812230 6812429 -59855576 - L1PA4 LINE L1 -2 6153 5950 1020 186 46 0 chr20 6812652 6812846 -59855159 + MER3 DNA MER1_type 6 208 -1 206 324 165 11 chr20 6812987 6813163 -59854842 - L2 LINE L2 0 3313 3111 1913 261 85 46 chr20 6815308 6816310 -59851695 - L1MEc LINE L1 -4048 2348 1308 21 36 0 0 chr20 6816323 6816351 -59851654 + AT_rich Low_complexity Low_complexity 1 28 0 666 269 34 21 chr20 6816713 6817143 -59850862 + L1MEd LINE L1 1136 1610 -4786 300 271 93 55 chr20 6817572 6817689 -59850316 + L1MEd LINE L1 2183 2294 -4102 601 222 60 0 chr20 6817689 6817806 -59850199 + FLAM_A SINE Alu 2 125 -8 300 271 93 55 chr20 6817806 6817924 -59850081 + L1MEd LINE L1 2294 2427 -3969 517 252 56 131 chr20 6817933 6818846 -59849159 + L1MB8 LINE L1 4143 4986 -1160 299 270 70 43 chr20 6819942 6820127 -59847878 - L1M4 LINE L1 -1156 4990 4801 2998 149 6 23 chr20 6820309 6820833 -59847172 + L1PA16 LINE L1 5652 6166 0 1176 204 89 15 chr20 6821157 6821426 -59846579 - MLT1F LTR MaLR 0 542 254 32 43 0 0 chr20 6821517 6821563 -59846442 + AT_rich Low_complexity Low_complexity 1 46 0 1090 219 108 23 chr20 6821572 6821960 -59846045 + L1MB8 LINE L1 5758 6178 0 343 307 56 22 chr20 6822121 6822300 -59845705 - L1ME4a LINE L1 -2 6119 5935 369 290 83 0 chr20 6822529 6822674 -59845331 - MIR3 SINE MIR -28 180 24 2260 157 60 26 chr20 6823965 6824417 -59843588 - MLT1C LTR MaLR 0 467 1 2415 76 0 16 chr20 6824804 6825118 -59842887 - AluY SINE Alu -2 309 1 191 156 44 0 chr20 6826493 6826538 -59841467 + CT-rich Low_complexity Low_complexity 4 50 0 38 22 0 0 chr20 6827399 6827444 -59840561 + AT_rich Low_complexity Low_complexity 1 45 0 192 40 0 0 chr20 6827463 6827488 -59840517 + (TG)n Simple_repeat Simple_repeat 2 26 0 1195 175 5 9 chr20 6828165 6828376 -59839629 - MER6B DNA MER2_type 0 210 1 2174 118 12 21 chr20 6828540 6828879 -59839126 + MER1B DNA MER1_type 2 337 0 576 246 33 0 chr20 6828900 6829022 -59838983 + MER5B DNA MER1_type 11 136 -42 189 171 0 0 chr20 6829072 6829107 -59838898 + MER5B DNA MER1_type 144 178 0 219 236 111 14 chr20 6829216 6829288 -59838717 + MIR SINE MIR 63 141 -121 180 302 0 0 chr20 6829289 6829332 -59838673 - L2 LINE L2 -8 3264 3222 525 274 55 0 chr20 6829401 6829547 -59838458 + MER5A DNA MER1_type 32 185 -4 442 279 9 0 chr20 6829566 6829677 -59838328 + MIR SINE MIR 149 260 -2 192 40 0 0 chr20 6829770 6829795 -59838210 + (TAA)n Simple_repeat Simple_repeat 2 26 0 1164 240 109 40 chr20 6831044 6831448 -59836557 - LTR16A1 LTR ERVL -24 433 2 1596 186 73 37 chr20 6832447 6832829 -59835176 - MSTD LTR MaLR 0 396 1 342 248 197 15 chr20 6832901 6833038 -59834967 + MIR SINE MIR 12 173 -89 5236 61 7 5 chr20 6833209 6833883 -59834122 - L1PA8 LINE L1 -14 6158 5483 838 320 147 41 chr20 6834254 6834599 -59833406 - L3 LINE CR1 -80 1497 1190 1703 194 0 3 chr20 6834599 6834883 -59833122 - AluJb SINE Alu -28 284 2 838 320 147 41 chr20 6834883 6835197 -59832808 - L3 LINE CR1 -387 1190 768 1037 169 0 0 chr20 6838156 6838328 -59829677 - AluJb SINE Alu -4 308 137 816 214 58 0 chr20 6838951 6839124 -59828881 + MER5A DNA MER1_type 1 183 -6 376 283 87 6 chr20 6839393 6839566 -59828439 + L1ME3A LINE L1 4357 4543 -1603 5131 173 14 8 chr20 6839611 6840682 -59827323 + L1MA6 LINE L1 4229 5305 -841 1377 124 35 86 chr20 6840730 6841078 -59826927 + L1MA6 LINE L1 5280 5609 -691 4638 230 18 2 chr20 6841085 6842270 -59825735 + L1PB1 LINE L1 2543 3746 -2400 * 5845 129 18 4 chr20 6842265 6843753 -59824252 + L1PB1 LINE L1 4644 6151 0 3115 167 28 31 chr20 6843751 6844423 -59823582 + L1MA6 LINE L1 5602 6271 -29 * 547 237 43 27 chr20 6844424 6844621 -59823384 - MER6 DNA MER2_type -1 864 -65 24 67 0 0 chr20 6844624 6844669 -59823336 + AT_rich Low_complexity Low_complexity 1 45 0 341 272 19 61 chr20 6844720 6844933 -59823072 + L1ME3A LINE L1 4745 4948 -1198 646 297 88 24 chr20 6845127 6845538 -59822467 - MLT1J1 LTR MaLR 0 446 10 274 232 40 0 chr20 6845649 6845748 -59822257 + L1ME3A LINE L1 5258 5360 -804 368 189 26 0 chr20 6845871 6846024 -59821981 + (TA)n Simple_repeat Simple_repeat 2 158 0 233 210 29 0 chr20 6846035 6846173 -59821832 + (TA)n Simple_repeat Simple_repeat 1 142 0 311 179 28 123 chr20 6846178 6846284 -59821721 + L1MC4 LINE L1 6607 6702 -1340 253 103 17 35 chr20 6846285 6846343 -59821662 - LTR66 LTR ERVL -173 437 381 604 310 74 23 chr20 6846346 6846698 -59821307 + L1ME3A LINE L1 5502 5871 -299 565 285 206 22 chr20 6847866 6848143 -59819862 - L2 LINE L2 -685 2629 2302 612 280 71 31 chr20 6848810 6849035 -59818970 + L2 LINE L2 2821 3054 -259 1347 269 66 17 chr20 6849135 6849603 -59818402 + LTR16C LTR ERVL 1 491 0 247 211 141 0 chr20 6850558 6850629 -59817376 - Charlie8 DNA MER1_type -2238 179 99 1726 183 7 3 chr20 6850645 6850954 -59817051 + AluJo SINE Alu 1 310 0 572 240 169 0 chr20 6851107 6851261 -59816744 + MER5A DNA MER1_type 10 189 0 1499 187 48 12 chr20 6851453 6851784 -59816221 - MER2 DNA MER2_type 0 344 2 211 364 73 9 chr20 6851903 6852013 -59815992 - L2 LINE L2 -17 3296 3180 704 195 0 47 chr20 6852429 6852598 -59815407 - L1MB8 LINE L1 -166 6012 5852 356 275 46 38 chr20 6853123 6853254 -59814751 - MIR SINE MIR -127 135 4 474 233 113 36 chr20 6853651 6853926 -59814079 + L1M1 LINE L1 2976 3271 -4294 1830 216 67 38 chr20 6853972 6854494 -59813511 - MER90 LTR ERV1 -77 537 1 206 226 69 118 chr20 6854520 6854622 -59813383 + MIR SINE MIR 37 133 -75 367 313 28 40 chr20 6855092 6855268 -59812737 + MER5B DNA MER1_type 5 178 0 567 265 0 87 chr20 6855275 6855481 -59812524 - MER5A DNA MER1_type 0 189 4 290 390 102 0 chr20 6858023 6858141 -59809864 - MIR3 SINE MIR -49 159 30 2400 106 0 0 chr20 6858212 6858514 -59809491 + AluSq SINE Alu 1 302 -11 1019 161 55 46 chr20 6860699 6860779 -59807226 - MER47A DNA MER2_type -1957 366 288 782 212 18 12 chr20 6860779 6860944 -59807061 + FRAM SINE Alu 1 166 0 1019 161 55 46 chr20 6860944 6861081 -59806924 - MER47A DNA MER2_type -2035 288 147 2024 112 6 139 chr20 6861081 6861701 -59806304 + MER1A DNA MER1_type 1 529 0 453 158 351 0 chr20 6861701 6861815 -59806190 - MER47A DNA MER2_type -212 154 1 449 251 64 55 chr20 6861938 6862264 -59805741 - HAL1b LINE L1 -265 1083 755 329 308 8 8 chr20 6862307 6862424 -59805581 + MIR SINE MIR 113 229 -33 287 308 26 8 chr20 6862538 6862655 -59805350 + MIR SINE MIR 111 229 -33 218 405 14 27 chr20 6863047 6863195 -59804810 - L2 LINE L2 0 3272 3127 336 216 0 0 chr20 6865963 6866060 -59801945 + (CATTC)n Simple_repeat Simple_repeat 1 97 0 21 0 0 0 chr20 6866696 6866717 -59801288 + AT_rich Low_complexity Low_complexity 1 21 0 2408 107 0 0 chr20 6867472 6867781 -59800224 - AluSq SINE Alu -4 309 1 212 184 0 0 chr20 6868485 6868523 -59799482 + T-rich Low_complexity Low_complexity 1 38 0 697 197 104 6 chr20 6869680 6869863 -59798142 - LTR16C LTR ERVL 0 491 291 2133 116 7 13 chr20 6871127 6871428 -59796577 + AluSx SINE Alu 1 299 -13 318 210 22 10 chr20 6871546 6871644 -59796361 - LTR50 LTR ERVL 0 795 425 708 218 141 0 chr20 6871855 6872089 -59795916 - LTR50 LTR ERVL -521 274 8 448 313 102 12 chr20 6874513 6874679 -59793326 + MER5A DNA MER1_type 8 188 -1 1617 191 3 25 chr20 6874845 6875160 -59792845 + AluJo SINE Alu 1 308 -4 1688 206 87 11 chr20 6876677 6877224 -59790781 - L1ME3 LINE L1 0 6162 5573 1985 173 14 66 chr20 6878158 6878581 -59789424 + MER57A LTR ERV1 2 402 -1 275 224 45 0 chr20 6878894 6878961 -59789044 - MLT1H LTR MaLR -1 548 479 422 299 15 15 chr20 6879127 6879261 -59788744 - MLT1H LTR MaLR -387 162 29 342 330 9 0 chr20 6879317 6879429 -59788576 - MIR SINE MIR -81 181 69 25 0 0 0 chr20 6880812 6880837 -59787168 + AT_rich Low_complexity Low_complexity 1 25 0 377 234 7 21 chr20 6882213 6882326 -59785679 + L1MC/D LINE L1 5435 5549 -613 319 223 21 32 chr20 6882530 6882624 -59785381 - MER34 LTR ERV1 -2 540 448 3417 159 68 19 chr20 6882697 6883331 -59784674 + LTR51 LTR ERV1 1 665 -6 1155 206 113 30 chr20 6883419 6883754 -59784251 - MER34C LTR ERV1 -222 363 1 1297 244 19 22 chr20 6884160 6884479 -59783526 + MLT1I LTR MaLR 84 401 -8 322 351 30 8 chr20 6884955 6885086 -59782919 - MIR3 SINE MIR -43 165 32 2412 56 10 3 chr20 6885100 6885402 -59782603 + AluY SINE Alu 1 304 -7 24 0 0 0 chr20 6886828 6886852 -59781153 + AT_rich Low_complexity Low_complexity 1 24 0 289 240 272 8 chr20 6887999 6888124 -59779881 + MIR SINE MIR 105 262 0 284 298 174 0 chr20 6888153 6888274 -59779731 - MIR3 SINE MIR -45 163 22 319 331 68 40 chr20 6888630 6888778 -59779227 + MIR3 SINE MIR 16 167 -41 844 133 58 111 chr20 6889085 6889310 -59778695 - MER20 DNA MER1_type -2 217 5 289 247 71 0 chr20 6889378 6889463 -59778542 - MLT1I LTR MaLR 0 409 319 1171 133 0 0 chr20 6889571 6889737 -59778268 + AluSc SINE Alu 135 300 -9 781 251 48 44 chr20 6891022 6891273 -59776732 + MIR SINE MIR 2 253 -9 308 109 0 0 chr20 6891479 6891525 -59776480 - L1MC4 LINE L1 -904 7138 7093 2111 251 27 69 chr20 6891555 6892430 -59775575 + L1MC4 LINE L1 7204 8042 0 5987 205 99 29 chr20 6893530 6895220 -59772785 - L1 LINE L1 -1422 4724 3152 2203 105 0 7 chr20 6895220 6895515 -59772490 - AluSg SINE Alu -17 293 1 1580 124 57 84 chr20 6895515 6895814 -59772191 - AluSg1 SINE Alu -18 291 1 5987 205 99 29 chr20 6895814 6895958 -59772047 - L1 LINE L1 -2993 3153 2762 928 127 15 0 chr20 6895970 6896104 -59771901 - AluJb SINE Alu -176 136 1 4941 179 27 19 chr20 6896106 6896179 -59771826 + L1MA9 LINE L1 4726 4797 -1515 2207 110 0 3 chr20 6896179 6896471 -59771534 + AluSq SINE Alu 1 291 -22 4941 179 27 19 chr20 6896471 6897939 -59770066 + L1MA9 LINE L1 4797 6276 -36 191 293 121 0 chr20 6899687 6899745 -59768260 + L2 LINE L2 3129 3193 -79 243 381 79 14 chr20 6899785 6899924 -59768081 + MIR3 SINE MIR 40 187 -21 343 196 0 0 chr20 6900020 6900076 -59767929 + Tigger5 DNA MER2_type 1 56 -2267 503 185 0 0 chr20 6900081 6900162 -59767843 + Tigger5 DNA MER2_type 2234 2314 -9 438 313 27 27 chr20 6900304 6900451 -59767554 + MIR SINE MIR 36 182 -80 187 382 45 27 chr20 6902901 6903121 -59764884 - L3 LINE CR1 -415 1162 939 284 291 45 18 chr20 6903806 6903916 -59764089 + MIR SINE MIR 2 114 -148 387 217 0 0 chr20 6903923 6904015 -59763990 - L1MA9 LINE L1 -5 6307 6216 227 91 23 0 chr20 6904084 6904128 -59763877 + L1M2 LINE L1 2310 2354 -4495 3308 160 20 24 chr20 6904130 6904766 -59763239 - L1MA9 LINE L1 -88 6224 5591 4080 156 42 11 chr20 6904777 6905579 -59762426 - L1MA8 LINE L1 -1 6290 5464 545 331 78 9 chr20 6905991 6906390 -59761615 + MLT1K LTR MaLR 115 588 0 374 349 86 14 chr20 6906629 6906838 -59761167 + MIR SINE MIR 2 225 -37 15108 186 39 8 chr20 6906845 6908797 -59759208 - L1 LINE L1 -3784 3064 989 399 41 0 0 chr20 6908797 6908846 -59759159 + (TG)n Simple_repeat Simple_repeat 1 49 0 15108 186 39 8 chr20 6908846 6909861 -59758144 - L1 LINE L1 -5859 989 7 22 35 0 0 chr20 6910156 6910185 -59757820 + AT_rich Low_complexity Low_complexity 1 29 0 2417 84 0 3 chr20 6910396 6910704 -59757301 - AluSc SINE Alu -2 307 1 633 313 58 3 chr20 6910705 6911031 -59756974 - L1ME4a LINE L1 -256 5865 5522 34 72 0 0 chr20 6911326 6911395 -59756610 + AT_rich Low_complexity Low_complexity 1 69 0 635 221 0 8 chr20 6911403 6911525 -59756480 + FLAM_C SINE Alu 3 123 -10 410 197 0 0 chr20 6911533 6911599 -59756406 - AluJ/FLAM SINE Alu -244 68 3 14686 137 22 9 chr20 6912641 6915029 -59752976 - Tigger1 DNA MER2_type 0 2418 1 529 214 48 8 chr20 6915890 6916016 -59751989 + Charlie8 DNA MER1_type 73 203 -2214 1537 148 30 23 chr20 6916017 6916321 -59751684 + L1MB8 LINE L1 5856 6161 -17 197 148 17 43 chr20 6918161 6918276 -59749729 + (TTATA)n Simple_repeat Simple_repeat 5 116 0 204 319 44 11 chr20 6918779 6918870 -59749135 - MIR3 SINE MIR -4 204 111 2463 185 38 20 chr20 6918881 6919805 -59748200 - L1M4 LINE L1 -452 6533 5595 25 31 0 0 chr20 6919849 6919881 -59748124 + AT_rich Low_complexity Low_complexity 1 32 0 349 258 143 48 chr20 6920008 6920217 -59747788 - HAL1b LINE L1 -1063 285 57 6341 210 83 19 chr20 6920327 6921740 -59746265 - L1M4 LINE L1 -5339 1520 18 22 0 0 0 chr20 6922115 6922137 -59745868 + AT_rich Low_complexity Low_complexity 1 22 0 2217 120 3 3 chr20 6923539 6923847 -59744158 - AluSx SINE Alu -4 308 1 376 337 30 24 chr20 6924022 6924235 -59743770 + MIR SINE MIR 37 249 -13 642 251 88 100 chr20 6924355 6924857 -59743148 + MLT1J LTR MaLR 13 508 -3 28 29 0 0 chr20 6924903 6924938 -59743067 + AT_rich Low_complexity Low_complexity 1 35 0 404 294 128 38 chr20 6925991 6926226 -59741779 + HAL1 LINE L1 1113 1368 -1139 330 227 191 4 chr20 6926325 6926550 -59741455 - HAL1 LINE L1 -1245 1262 996 1782 183 36 3 chr20 6926802 6927135 -59740870 + MER2 DNA MER2_type 1 344 0 4052 180 30 82 chr20 6927503 6927768 -59740237 - L1MB3 LINE L1 -1 6182 5905 234 0 0 0 chr20 6927768 6927794 -59740211 + (TG)n Simple_repeat Simple_repeat 1 26 0 4052 180 30 82 chr20 6927794 6928917 -59739088 - L1MB3 LINE L1 -278 5905 4871 961 181 135 46 chr20 6928914 6929217 -59738788 + L1MB8 LINE L1 5848 6177 -1 * 864 232 0 77 chr20 6929223 6929430 -59738575 + MER8 DNA MER2_type 49 239 0 1291 173 27 0 chr20 6929430 6929719 -59738286 + L1MB1 LINE L1 5782 6119 -70 920 133 0 13 chr20 6929729 6929880 -59738125 + L1MA10 LINE L1 6176 6324 -10 9705 223 48 36 chr20 6929884 6930222 -59737783 + L1MB8 LINE L1 2172 2505 -3742 2567 93 8 3 chr20 6930222 6930575 -59737430 + THE1A LTR MaLR 1 355 0 9705 223 48 36 chr20 6930575 6932920 -59735085 + L1MB8 LINE L1 2505 4871 -1376 297 0 0 0 chr20 6932920 6932953 -59735052 + (TC)n Simple_repeat Simple_repeat 2 34 0 9705 223 48 36 chr20 6932953 6934328 -59733677 + L1MB8 LINE L1 4871 6229 -18 24 32 0 0 chr20 6935074 6935105 -59732900 + AT_rich Low_complexity Low_complexity 1 31 0 1093 240 57 0 chr20 6935425 6935704 -59732301 + L1ME1 LINE L1 5595 5889 -277 577 259 8 30 chr20 6935719 6935824 -59732181 + L1MA10 LINE L1 5983 6089 -245 1503 183 115 3 chr20 6935824 6936136 -59731869 + MER7A DNA MER2_type 1 345 -1 577 259 8 30 chr20 6936136 6936228 -59731777 + L1MA10 LINE L1 6089 6332 -2 6194 189 66 9 chr20 6936914 6939538 -59728467 - L1MC1 LINE L1 -7 6326 3550 778 266 101 0 chr20 6939975 6940193 -59727812 + LTR16A LTR ERVL 144 383 -67 504 297 29 0 chr20 6940288 6940426 -59727579 + MIR SINE MIR 26 167 -95 890 182 47 6 chr20 6941112 6941282 -59726723 + MER5B DNA MER1_type 1 177 -1 305 267 86 0 chr20 6942081 6942186 -59725819 + MIR SINE MIR 40 153 -109 706 200 72 48 chr20 6942455 6942705 -59725300 + MER33 DNA MER1_type 47 302 -22 218 56 28 0 chr20 6943009 6943045 -59724960 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1639 230 23 4 chr20 6943158 6943522 -59724483 + MER77 LTR ERV1 196 525 -37 233 222 22 0 chr20 6943752 6943797 -59724208 - MER77 LTR ERV1 -361 244 199 710 326 19 23 chr20 6944067 6944206 -59723799 + LTR16C LTR ERVL 181 319 -172 3273 140 42 58 chr20 6944206 6944850 -59723155 - MER51A LTR ERV1 0 634 1 710 326 19 23 chr20 6944850 6945020 -59722985 + LTR16C LTR ERVL 319 489 -2 309 276 43 13 chr20 6947296 6947499 -59720506 - MLT1J2 LTR MaLR -123 327 85 477 0 0 0 chr20 6947664 6947717 -59720288 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 203 385 0 15 chr20 6947748 6947813 -59720192 + L2 LINE L2 2995 3058 -214 1347 233 106 45 chr20 6947857 6948282 -59719723 + LTR16A1 LTR ERVL 6 456 -1 276 313 188 0 chr20 6950606 6950734 -59717271 + MIR SINE MIR 74 225 -37 278 122 0 0 chr20 6950759 6950800 -59717205 - L2 LINE L2 -5 3308 3268 222 311 14 0 chr20 6950913 6950987 -59717018 - L2 LINE L2 -266 3047 2973 1208 186 60 116 chr20 6950987 6951368 -59716637 - MLT1A1 LTR MaLR 0 365 6 1229 281 94 2 chr20 6951374 6951779 -59716226 - L2 LINE L2 -337 2977 2536 3025 228 30 16 chr20 6952117 6952873 -59715132 - L1PA16 LINE L1 -2214 3932 3166 * 6402 182 32 14 chr20 6952872 6955077 -59712928 + L1PA16 LINE L1 3919 6163 -3 250 290 58 0 chr20 6955411 6955480 -59712525 + MIR3 SINE MIR 9 81 -127 275 254 67 12 chr20 6955810 6955956 -59712049 + L1M4c LINE L1 1674 2032 -869 305 299 107 16 chr20 6956328 6956515 -59711490 + L1M4c LINE L1 2443 2646 -3894 273 119 0 0 chr20 6956707 6956749 -59711256 + (TA)n Simple_repeat Simple_repeat 1 42 0 313 354 89 46 chr20 6956861 6957163 -59710842 + L2 LINE L2 2637 2951 -363 260 313 57 68 chr20 6957231 6957423 -59710582 + L2 LINE L2 3120 3309 -4 201 318 143 26 chr20 6957569 6957723 -59710282 + L2 LINE L2 2302 2473 -841 297 327 58 10 chr20 6957739 6957843 -59710162 - L2 LINE L2 0 3272 3164 429 403 35 0 chr20 6957983 6958209 -59709796 + L2 LINE L2 2580 2813 -501 316 290 76 124 chr20 6958254 6958609 -59709396 + L2 LINE L2 2935 3272 0 190 344 104 21 chr20 6958635 6958731 -59709274 - MIR3 SINE MIR -103 105 2 370 223 62 111 chr20 6958920 6959176 -59708829 + MIR SINE MIR 12 256 -6 842 174 12 76 chr20 6960325 6960497 -59707508 + MER5A DNA MER1_type 8 168 -21 324 301 9 0 chr20 6961140 6961253 -59706752 + (CATATA)n Simple_repeat Simple_repeat 6 119 0 852 222 97 0 chr20 6961262 6961469 -59706536 + L1ME3A LINE L1 5643 5869 -301 495 269 90 39 chr20 6961477 6961711 -59706294 + L1ME3A LINE L1 5914 6159 -11 370 267 62 41 chr20 6961902 6962048 -59705957 + MIR SINE MIR 80 228 -34 23 86 0 0 chr20 6962559 6962617 -59705388 + AT_rich Low_complexity Low_complexity 1 58 0 180 0 0 0 chr20 6962625 6962645 -59705360 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 1583 269 20 3 chr20 6962659 6963001 -59705004 + LTR16C LTR ERVL 144 491 0 184 204 41 0 chr20 6963813 6963862 -59704143 - L3 LINE CR1 -14 1563 1513 863 301 139 29 chr20 6964562 6964971 -59703034 - MER115 DNA AcHobo -239 454 1 1006 273 104 9 chr20 6965380 6965900 -59702105 - L2 LINE L2 -234 3079 2504 453 36 0 0 chr20 6966219 6966274 -59701731 + (TAGG)n Simple_repeat Simple_repeat 1 55 0 353 186 137 8 chr20 6967040 6967164 -59700841 - L2 LINE L2 -626 2688 2549 363 78 0 0 chr20 6968353 6968404 -59699601 + (TG)n Simple_repeat Simple_repeat 2 52 0 189 0 0 0 chr20 6968404 6968425 -59699580 + (TA)n Simple_repeat Simple_repeat 2 22 0 766 276 20 5 chr20 6969187 6969386 -59698619 + MIR SINE MIR 11 212 -50 1085 177 16 0 chr20 6969386 6969578 -59698427 + MLT1D LTR MaLR 311 505 0 531 175 0 28 chr20 6969996 6970139 -59697866 + GA-rich Low_complexity Low_complexity 4 142 0 968 201 12 0 chr20 6970896 6971065 -59696940 - AluJb SINE Alu -8 304 134 514 305 90 11 chr20 6971814 6971991 -59696014 - MIR3 SINE MIR -11 197 7 968 211 47 86 chr20 6972427 6972811 -59695194 + L1MC4 LINE L1 7515 7883 -159 240 35 0 0 chr20 6972812 6972841 -59695164 + (TATAG)n Simple_repeat Simple_repeat 5 33 0 263 363 40 24 chr20 6973271 6973395 -59694610 - MIR SINE MIR -66 142 17 369 362 40 20 chr20 6973408 6973560 -59694445 - MER5A DNA MER1_type 0 189 35 2243 106 50 9 chr20 6973791 6974132 -59693873 + THE1A LTR MaLR 1 355 0 637 304 100 17 chr20 6975183 6975413 -59692592 + MIR SINE MIR 3 251 -11 577 216 170 7 chr20 6975740 6975893 -59692112 - MER5A DNA MER1_type -2 187 10 410 277 16 54 chr20 6976059 6976243 -59691762 + MER5B DNA MER1_type 2 178 0 794 173 4 169 chr20 6976252 6976405 -59691600 - MER5A DNA MER1_type -1 188 82 667 229 15 0 chr20 6976405 6976536 -59691469 - FLAM_A SINE Alu 0 133 1 794 173 4 169 chr20 6976536 6976607 -59691398 - MER5A DNA MER1_type -107 82 1 338 303 40 10 chr20 6976630 6976729 -59691276 - L2 LINE L2 0 3313 3212 227 304 51 0 chr20 6978150 6978229 -59689776 - MIR SINE MIR -56 206 124 303 226 24 95 chr20 6978979 6979063 -59688942 + MER5A DNA MER1_type 9 86 -103 234 0 0 0 chr20 6981377 6981403 -59686602 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 768 211 165 8 chr20 6981475 6981736 -59686269 + MER33 DNA MER1_type 23 324 0 260 295 0 0 chr20 6981938 6981999 -59686006 + L2 LINE L2 3252 3312 -1 238 298 149 0 chr20 6982106 6982200 -59685805 + MLT1I LTR MaLR 110 217 -192 1359 113 0 0 chr20 6982219 6982405 -59685600 - AluSc SINE Alu 0 309 124 883 38 0 0 chr20 6982405 6982510 -59685495 + AluSc SINE Alu 28 132 -177 367 314 8 0 chr20 6982552 6982670 -59685335 + MLT1I LTR MaLR 288 406 -3 1184 250 69 37 chr20 6983824 6984260 -59683745 - LTR16A1 LTR ERVL -6 451 2 198 323 15 0 chr20 6984369 6984434 -59683571 + MIR3 SINE MIR 118 183 -25 534 194 10 19 chr20 6985141 6985244 -59682761 + MIR SINE MIR 28 129 -133 388 293 107 21 chr20 6985263 6985505 -59682500 + HAL1b LINE L1 245 507 -841 180 268 0 0 chr20 6985505 6985576 -59682429 + (CA)n Simple_repeat Simple_repeat 1 71 0 858 234 196 44 chr20 6985585 6986171 -59681834 + HAL1b LINE L1 513 1187 -161 379 339 40 11 chr20 6986180 6986357 -59681648 + HAL1b LINE L1 1161 1342 -6 337 300 64 34 chr20 6987078 6987311 -59680694 - Charlie8 DNA MER1_type -2176 241 2 632 313 141 18 chr20 6988691 6988975 -59679030 + L3b LINE CR1 1257 1575 -8 311 0 26 0 chr20 6989032 6989071 -59678934 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 907 169 68 42 chr20 6989117 6989350 -59678655 - MER63B DNA MER1_type 0 434 196 275 146 0 0 chr20 6989350 6989398 -59678607 - MSTD LTR MaLR 0 457 410 1046 85 23 17 chr20 6989406 6989548 -59678457 + (TTTC)n Simple_repeat Simple_repeat 1 320 0 1046 85 23 17 chr20 6989548 6989725 -59678280 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1792 103 0 103 chr20 6989754 6990064 -59677941 - AluSx SINE Alu -34 278 1 1127 212 76 68 chr20 6990066 6990420 -59677585 - MSTD LTR MaLR -39 357 1 756 232 62 0 chr20 6990420 6990597 -59677408 - MER63B DNA MER1_type -234 202 15 540 206 27 7 chr20 6990641 6990943 -59677062 + GA-rich Low_complexity Low_complexity 1 308 0 1221 184 12 34 chr20 6991166 6991492 -59676513 - MER33 DNA MER1_type 0 324 6 640 296 40 36 chr20 6991758 6992005 -59676000 + MIR SINE MIR 9 256 -6 5964 134 25 4 chr20 6992006 6993129 -59674876 + L1MA2 LINE L1 5162 6304 0 186 189 0 0 chr20 6993625 6993662 -59674343 + (CATA)n Simple_repeat Simple_repeat 2 38 0 23 0 0 0 chr20 6993953 6993976 -59674029 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr20 6994020 6994050 -59673955 + AT_rich Low_complexity Low_complexity 1 30 0 2390 93 3 0 chr20 6994192 6994504 -59673501 + AluSp SINE Alu 1 313 0 210 225 0 0 chr20 6994559 6994599 -59673406 + CT-rich Low_complexity Low_complexity 1 40 0 1726 127 41 4 chr20 6994600 6994867 -59673138 - AluSp SINE Alu -1 312 36 1702 128 8 4 chr20 6994872 6995129 -59672876 - AluSg SINE Alu -8 302 45 352 90 39 26 chr20 6995130 6995208 -59672797 + T-rich Low_complexity Low_complexity 5 83 0 479 149 0 11 chr20 6995217 6995311 -59672694 + (TTCC)n Simple_repeat Simple_repeat 3 95 0 499 271 41 106 chr20 6995312 6995652 -59672353 - MLT1H LTR MaLR -4 545 228 256 259 12 0 chr20 6995844 6995925 -59672080 + MLT1I LTR MaLR 328 409 0 844 110 14 2 chr20 6996437 6996585 -59671420 - L1M3 LINE L1 -340 5811 5659 306 293 0 9 chr20 6997492 6997598 -59670407 + (TA)n Simple_repeat Simple_repeat 2 106 0 762 246 16 5 chr20 6997795 6997982 -59670023 + MER5A DNA MER1_type 1 189 0 329 286 40 31 chr20 6998024 6998251 -59669754 + L1MEd LINE L1 975 1203 -4916 565 223 29 7 chr20 6998255 6998394 -59669611 + Charlie8 DNA MER1_type 106 247 -2170 517 275 83 36 chr20 6998403 6998596 -59669409 + MIR SINE MIR 22 223 -39 232 222 37 25 chr20 6998674 6998755 -59669250 + MIR SINE MIR 84 165 -97 1555 228 38 14 chr20 6998878 6999303 -59668702 - MER63B DNA MER1_type -1 435 1 285 262 87 19 chr20 6999642 6999745 -59668260 - MIR SINE MIR -48 214 105 524 250 172 64 chr20 6999785 7000221 -59667784 - MLT1H1 LTR MaLR -13 542 60 597 234 179 33 chr20 7001559 7001832 -59666173 - MLT1J2 LTR MaLR 0 450 138 4228 167 80 19 chr20 7002121 7002934 -59665071 - MER21B LTR ERV1 0 863 1 1032 254 5 5 chr20 7003201 7003425 -59664580 + MER58A DNA MER1_type 1 224 0 1719 190 40 3 chr20 7004648 7004948 -59663057 - AluJb SINE Alu -1 311 1 273 373 84 31 chr20 7005111 7005336 -59662669 + L3 LINE CR1 63 299 -1278 377 298 173 13 chr20 7005802 7006027 -59661978 + L3 LINE CR1 418 678 -899 902 288 148 30 chr20 7006027 7006520 -59661485 - MLT1K LTR MaLR -6 582 32 717 307 116 16 chr20 7006540 7006918 -59661087 + L3 LINE CR1 676 1091 -486 440 344 36 36 chr20 7008183 7008433 -59659572 - MIR SINE MIR -1 261 12 259 238 48 0 chr20 7008463 7008526 -59659479 + MER63 DNA MER1_type 2 67 -994 336 166 108 70 chr20 7008574 7008731 -59659274 + MER63 DNA MER1_type 59 221 -840 3135 219 20 58 chr20 7008749 7009904 -59658101 + L1ME1 LINE L1 5032 6142 -24 37 52 0 0 chr20 7009904 7009962 -59658043 + AT_rich Low_complexity Low_complexity 1 58 0 1134 266 91 23 chr20 7012524 7012963 -59655042 - LTR33A LTR ERVL 0 523 55 900 288 140 11 chr20 7013705 7014163 -59653842 - LTR33A LTR ERVL 0 523 7 352 226 31 54 chr20 7015370 7015550 -59652455 - L1ME1 LINE L1 -194 5976 5790 2684 256 96 32 chr20 7017003 7018130 -59649875 - MER69B DNA AcHobo 0 1226 28 1068 114 0 0 chr20 7018500 7018667 -59649338 + (TCCC)n Simple_repeat Simple_repeat 4 170 0 527 77 0 13 chr20 7018671 7018749 -59649256 + (TTCC)n Simple_repeat Simple_repeat 2 78 0 443 313 39 17 chr20 7018762 7018941 -59649064 + MIR3 SINE MIR 20 202 -6 473 234 22 87 chr20 7019142 7019326 -59648679 - MIR SINE MIR -23 239 68 267 250 125 29 chr20 7020068 7020172 -59647833 + MIR SINE MIR 30 143 -65 263 246 0 18 chr20 7020380 7020437 -59647568 + MIR3 SINE MIR 151 206 -2 381 247 59 102 chr20 7021423 7021483 -59646522 + MER5B DNA MER1_type 1 62 -116 2349 114 0 0 chr20 7021483 7021790 -59646215 + AluSx SINE Alu 1 307 -5 381 247 59 102 chr20 7021790 7021915 -59646090 + MER5B DNA MER1_type 62 178 0 323 241 9 89 chr20 7021962 7022074 -59645931 + L2 LINE L2 3162 3264 -8 2264 102 7 0 chr20 7022171 7022464 -59645541 - AluSq SINE Alu -14 299 5 2558 110 6 14 chr20 7023263 7023628 -59644377 - THE1B LTR MaLR -2 362 1 264 222 74 25 chr20 7023647 7023728 -59644277 + L2 LINE L2 3188 3272 0 23 54 0 0 chr20 7023787 7023824 -59644181 + AT_rich Low_complexity Low_complexity 1 37 0 244 254 110 17 chr20 7024578 7024696 -59643309 - L2 LINE L2 -1552 1762 1634 276 223 223 0 chr20 7024962 7025065 -59642940 + Charlie4 DNA MER1_type 1818 1943 -18 269 372 0 31 chr20 7025287 7025416 -59642589 - MER5A DNA MER1_type -50 139 15 323 278 32 56 chr20 7027133 7027349 -59640656 + MLT1L LTR MaLR 202 412 -203 408 373 122 8 chr20 7027477 7027740 -59640265 - L2 LINE L2 -4 3268 2976 553 138 7 48 chr20 7028595 7028740 -59639265 + CT-rich Low_complexity Low_complexity 3 141 0 25 51 0 0 chr20 7029367 7029406 -59638599 + AT_rich Low_complexity Low_complexity 1 39 0 196 283 0 38 chr20 7029721 7029774 -59638231 + L2 LINE L2 3247 3297 -16 1941 135 32 29 chr20 7030913 7031224 -59636781 - AluSx SINE Alu 0 312 1 239 303 121 0 chr20 7031253 7031352 -59636653 + L2 LINE L2 3199 3309 -4 627 267 8 21 chr20 7031452 7031556 -59636449 + LTR16C LTR ERVL 186 290 -201 1724 163 46 6 chr20 7031556 7031882 -59636123 + MER44D DNA MER2_type 1 609 0 627 267 8 21 chr20 7031882 7032037 -59635968 + LTR16C LTR ERVL 290 491 0 2180 208 97 17 chr20 7032110 7032686 -59635319 + MLT1E3 LTR MaLR 2 623 -1 313 319 142 21 chr20 7032742 7033024 -59634981 - L2 LINE L2 -800 2514 2199 2881 56 14 0 chr20 7033038 7033420 -59634585 + L1PA7 LINE L1 5775 6161 0 234 300 56 0 chr20 7033632 7033722 -59634283 - MER117 DNA MER1_type -3 194 100 658 159 203 18 chr20 7033816 7033979 -59634026 + L1PA15 LINE L1 5968 6160 -5 1769 183 3 7 chr20 7035320 7035610 -59632395 + AluJo SINE Alu 1 289 -23 267 289 72 47 chr20 7036121 7036452 -59631553 + L2 LINE L2 2549 2958 -314 239 303 0 0 chr20 7036592 7036658 -59631347 + L2 LINE L2 3241 3306 -7 181 152 0 0 chr20 7036929 7036962 -59631043 + L2 LINE L2 3279 3311 -2 582 109 0 0 chr20 7036966 7037058 -59630947 + (TGGA)n Simple_repeat Simple_repeat 1 92 0 185 316 26 68 chr20 7037336 7037453 -59630552 + L2 LINE L2 1886 1997 -1317 380 223 92 70 chr20 7038725 7038898 -59629107 + MIR SINE MIR 19 191 -66 206 286 16 110 chr20 7039100 7039282 -59628723 + MIR SINE MIR 96 260 -2 1972 145 3 7 chr20 7039398 7039701 -59628304 + AluSx SINE Alu 1 302 -10 492 117 0 0 chr20 7039710 7039787 -59628218 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 889 269 94 12 chr20 7040191 7040593 -59627412 - Charlie4a DNA MER1_type -33 475 41 401 327 25 44 chr20 7040835 7040994 -59627011 - MER5A DNA MER1_type -3 186 31 393 233 23 11 chr20 7041151 7041327 -59626678 + GA-rich Low_complexity Low_complexity 1 178 0 188 256 0 0 chr20 7041432 7041471 -59626534 - L2 LINE L2 -8 3305 3267 1637 248 61 53 chr20 7041776 7042383 -59625622 - MLT1G LTR MaLR -12 578 5 2014 123 0 10 chr20 7042413 7042706 -59625299 + AluSx SINE Alu 22 311 -1 602 222 0 8 chr20 7043619 7043745 -59624260 + FLAM_C SINE Alu 1 125 -18 392 292 17 17 chr20 7044240 7044360 -59623645 + MIR3 SINE MIR 71 190 -18 907 242 5 16 chr20 7044404 7044590 -59623415 - MER5A DNA MER1_type -5 184 1 911 279 61 74 chr20 7045033 7045571 -59622434 + MLT1F LTR MaLR 12 542 0 379 314 7 36 chr20 7045658 7045798 -59622207 - MER63A DNA MER1_type -13 197 62 253 367 33 39 chr20 7046428 7046608 -59621397 - MIR SINE MIR -77 185 7 214 276 192 32 chr20 7046663 7046819 -59621186 - L3b LINE CR1 -133 1450 1270 648 358 9 0 chr20 7047220 7047438 -59620567 + MIR SINE MIR 41 260 -2 2052 174 126 39 chr20 7047571 7048089 -59619916 - MLT1F1 LTR MaLR 0 567 5 371 284 121 7 chr20 7048111 7048252 -59619753 - MIR3 SINE MIR -10 198 42 643 145 75 0 chr20 7048434 7048593 -59619412 + Charlie5 DNA MER1_type 2348 2518 -94 682 121 0 23 chr20 7049004 7049136 -59618869 + (TTCC)n Simple_repeat Simple_repeat 4 132 0 228 118 0 0 chr20 7049136 7049170 -59618835 + (TC)n Simple_repeat Simple_repeat 2 35 0 186 43 0 0 chr20 7049806 7049829 -59618176 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1169 153 22 61 chr20 7050454 7050682 -59617323 + MER20 DNA MER1_type 1 219 0 211 326 92 20 chr20 7050962 7051060 -59616945 + L3b LINE CR1 1399 1503 -80 530 355 51 28 chr20 7051309 7051698 -59616307 + LTR33 LTR ERVL 25 422 -99 948 92 7 7 chr20 7051704 7051846 -59616159 + L1PA7 LINE L1 6007 6148 -6 4470 156 19 2 chr20 7051880 7052689 -59615316 + L1MC2 LINE L1 5514 6335 -9 428 282 0 8 chr20 7053046 7053170 -59614835 - MER94 DNA DNA -1 133 11 247 306 231 31 chr20 7053632 7053792 -59614213 - L2 LINE L2 0 3313 3122 1508 248 122 24 chr20 7054157 7054697 -59613308 - MLT1G1 LTR MaLR 0 595 3 254 278 56 0 chr20 7054926 7055070 -59612935 + MER103 DNA DNA 13 164 -2 1445 199 31 9 chr20 7056775 7057102 -59610903 - MLT1A1 LTR MaLR -20 345 12 264 306 69 94 chr20 7057767 7058012 -59609993 + MIR SINE MIR 23 261 -1 189 132 0 0 chr20 7058135 7058173 -59609832 + (TA)n Simple_repeat Simple_repeat 2 39 0 326 141 0 16 chr20 7058600 7058664 -59609341 + (TA)n Simple_repeat Simple_repeat 2 64 0 324 239 0 0 chr20 7059350 7059421 -59608584 + MIR SINE MIR 183 253 -9 1897 100 7 15 chr20 7059662 7059932 -59608073 - AluSc SINE Alu -1 308 41 268 331 16 41 chr20 7060524 7060645 -59607360 + MIR3 SINE MIR 88 205 -3 433 331 144 32 chr20 7063273 7063755 -59604250 + L2 LINE L2 2720 3308 -5 232 337 48 12 chr20 7063923 7064006 -59603999 + L2 LINE L2 3006 3091 -181 404 278 134 21 chr20 7064375 7064569 -59603436 - MIR SINE MIR -5 257 42 798 241 66 31 chr20 7065570 7066116 -59601889 + L1ME3A LINE L1 5557 6164 -6 180 0 0 0 chr20 7067083 7067103 -59600902 + (TG)n Simple_repeat Simple_repeat 1 20 0 477 316 61 4 chr20 7067851 7068079 -59599926 - LTR16C LTR ERVL 0 491 251 180 216 0 0 chr20 7068234 7068285 -59599720 + A-rich Low_complexity Low_complexity 1 51 0 1613 253 22 31 chr20 7069345 7069887 -59598118 + L1ME1 LINE L1 5563 6099 -67 637 66 0 38 chr20 7070188 7070294 -59597711 + (TC)n Simple_repeat Simple_repeat 1 102 0 759 268 36 8 chr20 7071181 7071429 -59596576 + MIR SINE MIR 3 258 -4 215 284 19 117 chr20 7071462 7071624 -59596381 - L2 LINE L2 -223 3049 2904 345 221 8 34 chr20 7072285 7072412 -59595593 - L1MCa LINE L1 -1339 6983 2003 1489 77 0 0 chr20 7072559 7072773 -59595232 - AluY SINE Alu 0 313 100 183 100 0 0 chr20 7072998 7073028 -59594977 + (CA)n Simple_repeat Simple_repeat 1 30 0 257 243 0 29 chr20 7073734 7073804 -59594201 + L2 LINE L2 3236 3303 -10 2522 53 10 0 chr20 7073922 7074222 -59593783 + AluY SINE Alu 1 303 -8 599 235 127 12 chr20 7074250 7074416 -59593589 + MIR SINE MIR 78 262 0 324 329 87 30 chr20 7074443 7074674 -59593331 - L2 LINE L2 -96 3176 2933 634 291 43 18 chr20 7075205 7075483 -59592522 + LTR33 LTR ERVL 3 287 -234 393 293 20 7 chr20 7075533 7075680 -59592325 + LTR33 LTR ERVL 366 514 -7 468 273 24 81 chr20 7075684 7075893 -59592112 + MIR SINE MIR 66 262 0 473 295 65 0 chr20 7075937 7076076 -59591929 - MIR3 SINE MIR -5 203 56 502 50 0 0 chr20 7077271 7077331 -59590674 - L1MB1 LINE L1 -3 6165 6106 1807 46 18 0 chr20 7077352 7077641 -59590364 - L1PA7 LINE L1 -686 5486 5194 * 4202 55 0 2 chr20 7077639 7078185 -59589820 + L1PA7 LINE L1 5489 6033 -121 5644 57 3 1 chr20 7077641 7078304 -59589701 + L1PA7 LINE L1 5489 6154 0 498 252 150 0 chr20 7078531 7078678 -59589327 + MER91A DNA MER1_type 1 169 -27 911 263 108 50 chr20 7078682 7078874 -59589131 - LTR16C LTR ERVL 0 491 312 3692 128 23 4 chr20 7078874 7079389 -59588616 - MER1A DNA MER1_type 0 527 3 911 263 108 50 chr20 7079389 7079577 -59588428 - LTR16C LTR ERVL -179 312 89 336 102 0 0 chr20 7080144 7080193 -59587812 + (TG)n Simple_repeat Simple_repeat 2 50 0 248 266 160 0 chr20 7080617 7080711 -59587294 - MIR SINE MIR -65 143 35 500 299 77 15 chr20 7080794 7081228 -59586777 + LTR33 LTR ERVL 3 506 -15 276 235 59 12 chr20 7081248 7081333 -59586672 + MIR SINE MIR 123 211 -51 327 308 19 10 chr20 7082191 7082295 -59585710 + MIR SINE MIR 12 116 -146 425 190 69 138 chr20 7082304 7082396 -59585609 - MER63A DNA MER1_type -1484 204 128 1834 140 6 35 chr20 7082396 7082710 -59585295 + AluSx SINE Alu 1 305 -7 425 190 69 138 chr20 7082710 7082791 -59585214 - MER63A DNA MER1_type -1560 128 43 894 152 11 6 chr20 7082805 7082983 -59585022 + CT-rich Low_complexity Low_complexity 2 180 0 296 102 20 0 chr20 7083005 7083054 -59584951 + (TC)n Simple_repeat Simple_repeat 2 51 0 426 229 55 18 chr20 7083071 7083180 -59584825 + MIR SINE MIR 79 191 -71 215 294 59 0 chr20 7084931 7084999 -59583006 - L2 LINE L2 -7 3265 3194 197 237 136 0 chr20 7086612 7086671 -59581334 + MIR3 SINE MIR 120 186 -22 205 279 0 51 chr20 7087197 7087276 -59580729 - L2 LINE L2 -4 3268 3194 1086 240 31 105 chr20 7091158 7091493 -59576512 + MLT1H LTR MaLR 75 360 -189 327 49 0 0 chr20 7091493 7091534 -59576471 + (CAGCC)n Simple_repeat Simple_repeat 5 45 0 1086 240 31 105 chr20 7091534 7091711 -59576294 + MLT1H LTR MaLR 360 549 0 1792 129 4 0 chr20 7092475 7092731 -59575274 - AluSx SINE Alu -12 300 44 2409 88 0 3 chr20 7094206 7094511 -59573494 + AluSq SINE Alu 1 304 -9 523 313 30 5 chr20 7095828 7096026 -59571979 + MIR SINE MIR 22 224 -38 472 345 60 82 chr20 7096224 7096284 -59571721 - L2 LINE L2 0 3272 3212 2120 135 0 7 chr20 7096284 7096587 -59571418 - AluSx SINE Alu -11 301 1 472 345 60 82 chr20 7096587 7096992 -59571013 - L2 LINE L2 -60 3212 2817 382 61 30 30 chr20 7097546 7097612 -59570393 + (GAAA)n Simple_repeat Simple_repeat 3 68 0 26 0 0 0 chr20 7097901 7097927 -59570078 + AT_rich Low_complexity Low_complexity 1 26 0 326 245 238 7 chr20 7098328 7098471 -59569534 + MER5A DNA MER1_type 13 188 -1 255 133 0 0 chr20 7098736 7098781 -59569224 + (GA)n Simple_repeat Simple_repeat 2 46 0 369 0 0 0 chr20 7099823 7099864 -59568141 + (CA)n Simple_repeat Simple_repeat 1 41 0 252 336 60 0 chr20 7101388 7101522 -59566483 + L2 LINE L2 2337 2478 -836 531 313 107 5 chr20 7101702 7101926 -59566079 + MIR SINE MIR 6 252 -10 496 317 60 70 chr20 7102049 7102519 -59565486 + L2 LINE L2 2807 3271 -1 286 329 17 68 chr20 7102516 7102753 -59565252 - L2 LINE L2 -785 2529 2305 * 805 300 44 31 chr20 7102820 7103137 -59564868 - MLT1I LTR MaLR -19 390 70 189 364 45 0 chr20 7103818 7103928 -59564077 + L3 LINE CR1 1401 1515 -62 594 28 0 0 chr20 7103946 7104018 -59563987 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 1256 168 20 72 chr20 7104020 7104242 -59563763 + MLT1C LTR MaLR 191 396 -71 2865 13 0 0 chr20 7104242 7104553 -59563452 + AluYa5 SINE Alu 1 311 0 1256 168 20 72 chr20 7104553 7104622 -59563383 + MLT1C LTR MaLR 396 467 0 246 317 26 26 chr20 7105508 7105622 -59562383 - MIR SINE MIR -73 135 42 1235 120 6 0 chr20 7107113 7107280 -59560725 + AluSx SINE Alu 5 172 -140 24 32 0 0 chr20 7107280 7107311 -59560694 + AT_rich Low_complexity Low_complexity 1 31 0 1366 232 40 27 chr20 7107429 7107800 -59560205 + L1MD3 LINE L1 7463 7838 -157 1006 207 102 53 chr20 7107800 7108173 -59559832 + MER57A LTR ERV1 1 403 0 840 188 7 0 chr20 7108174 7108328 -59559677 + L1MD3 LINE L1 7836 7990 -5 201 139 0 0 chr20 7108328 7108371 -59559634 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 610 309 39 5 chr20 7108433 7108637 -59559368 + MIR SINE MIR 34 244 -18 1172 241 44 0 chr20 7108803 7109073 -59558932 + MLT1G1 LTR MaLR 2 283 -312 668 231 27 41 chr20 7109073 7109220 -59558785 + AluJo SINE Alu 111 255 -57 777 269 127 4 chr20 7109220 7109480 -59558525 + MLT1G1 LTR MaLR 285 576 -19 711 230 23 40 chr20 7110449 7110563 -59557442 - MER5A DNA MER1_type -1 188 76 1820 160 0 23 chr20 7110563 7110863 -59557142 - AluJo SINE Alu -17 295 3 711 230 23 40 chr20 7110863 7110922 -59557083 - MER5A DNA MER1_type -113 76 18 212 337 41 10 chr20 7110989 7111087 -59556918 - MIR SINE MIR -68 140 40 2283 113 3 0 chr20 7112157 7112459 -59555546 - AluSq SINE Alu -8 305 3 2249 260 62 7 chr20 7112462 7113140 -59554865 - L1ME3A LINE L1 -36 6134 5420 1476 248 60 10 chr20 7113280 7113695 -59554310 + L1ME1 LINE L1 5726 6161 -5 2116 92 4 0 chr20 7113714 7113987 -59554018 + AluSp SINE Alu 37 310 -3 610 255 7 7 chr20 7116231 7116376 -59551629 + MER117 DNA MER1_type 1 145 -52 378 184 145 21 chr20 7117288 7117428 -59550577 - MLT1F1 LTR MaLR -17 550 427 394 289 10 13 chr20 7117539 7117682 -59550323 - MLT1H LTR MaLR -242 187 57 182 368 23 35 chr20 7117811 7117898 -59550107 + MIR SINE MIR 6 91 -171 555 279 107 17 chr20 7118285 7118518 -59549487 + MLT1J2 LTR MaLR 67 320 -130 248 158 18 0 chr20 7119308 7119365 -59548640 + CT-rich Low_complexity Low_complexity 1 58 0 2586 219 56 37 chr20 7120934 7121634 -59546371 - L1ME3A LINE L1 -38 6132 5420 248 299 239 27 chr20 7122141 7122325 -59545680 + MIR SINE MIR 19 241 -21 187 195 73 0 chr20 7122296 7122337 -59545668 + L2 LINE L2 3217 3260 -12 * 22 0 0 0 chr20 7123187 7123209 -59544796 + AT_rich Low_complexity Low_complexity 1 22 0 201 299 58 11 chr20 7123395 7123482 -59544523 - MIR SINE MIR -93 169 79 487 330 89 26 chr20 7123628 7123814 -59544191 - L3 LINE CR1 -35 1542 1328 806 214 8 126 chr20 7123814 7124052 -59543953 - MER63A DNA MER1_type 0 210 1 487 330 89 26 chr20 7124052 7124168 -59543837 - L3 LINE CR1 -249 1328 1221 370 373 43 19 chr20 7124186 7124395 -59543610 + MIR SINE MIR 47 260 -2 623 268 156 73 chr20 7124470 7124955 -59543050 - LTR33 LTR ERVL -7 516 24 497 294 65 26 chr20 7126075 7126306 -59541699 - Charlie8 DNA MER1_type -2028 389 150 247 24 24 24 chr20 7126314 7126355 -59541650 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 180 125 0 0 chr20 7126730 7126762 -59541243 + (CA)n Simple_repeat Simple_repeat 2 33 0 2159 136 7 0 chr20 7127193 7127503 -59540502 - MER1B DNA MER1_type 0 339 28 1079 267 181 2 chr20 7129071 7129490 -59538515 - LTR33A LTR ERVL -1 522 29 754 234 8 98 chr20 7130259 7130524 -59537481 - MIR SINE MIR -21 241 1 856 256 79 4 chr20 7130534 7130761 -59537244 - MLT1G LTR MaLR -335 255 12 279 0 0 0 chr20 7131240 7131271 -59536734 + (TG)n Simple_repeat Simple_repeat 1 31 0 24 0 0 0 chr20 7131839 7131863 -59536142 + AT_rich Low_complexity Low_complexity 1 24 0 638 344 57 0 chr20 7132083 7132330 -59535675 + MIR SINE MIR 1 261 -1 21 36 0 0 chr20 7132597 7132625 -59535380 + AT_rich Low_complexity Low_complexity 1 28 0 325 296 44 48 chr20 7132903 7133197 -59534808 + HAL1b LINE L1 178 470 -878 382 292 24 56 chr20 7133462 7133536 -59534469 + HAL1b LINE L1 670 745 -603 1903 140 9 22 chr20 7133536 7133851 -59534154 + AluJb SINE Alu 1 311 -1 382 292 24 56 chr20 7133851 7134026 -59533979 + HAL1b LINE L1 745 911 -437 278 289 26 0 chr20 7134052 7134128 -59533877 - L2 LINE L2 0 3313 3236 935 227 15 0 chr20 7134128 7134326 -59533679 + MER6B DNA MER2_type 3 203 -7 333 349 62 16 chr20 7134545 7134852 -59533153 + L1MC/D LINE L1 4981 5301 -845 278 245 210 80 chr20 7134890 7135044 -59532961 + L1MC/D LINE L1 5278 5411 -2397 2427 69 3 3 chr20 7135044 7135348 -59532657 + AluY SINE Alu 1 304 -7 278 245 210 80 chr20 7135348 7135703 -59532302 + L1MC/D LINE L1 5411 5864 -1944 2082 97 4 7 chr20 7135703 7136007 -59531998 - AluSc SINE Alu 0 303 1 278 245 210 80 chr20 7136007 7136034 -59531971 + L1MC/D LINE L1 5864 5886 -1922 35 24 0 0 chr20 7136187 7136229 -59531776 + AT_rich Low_complexity Low_complexity 1 42 0 1032 142 0 0 chr20 7136363 7136511 -59531494 + FRAM SINE Alu 9 156 -20 28 79 0 0 chr20 7136512 7136575 -59531430 + AT_rich Low_complexity Low_complexity 1 63 0 4038 175 46 1 chr20 7136861 7137651 -59530354 - L1 LINE L1 -915 5231 4407 2273 151 20 25 chr20 7137639 7138127 -59529878 + L1MA9 LINE L1 5702 6290 -22 * 28 29 0 0 chr20 7138132 7138167 -59529838 + AT_rich Low_complexity Low_complexity 1 35 0 1806 135 112 35 chr20 7138494 7138842 -59529163 + THE1C LTR MaLR 1 375 0 250 192 13 13 chr20 7139227 7139305 -59528700 + CT-rich Low_complexity Low_complexity 3 80 0 482 304 30 38 chr20 7140417 7140654 -59527351 + L2 LINE L2 2855 3089 -183 596 290 116 1 chr20 7140906 7141284 -59526721 - LTR16C LTR ERVL -8 483 34 348 264 56 32 chr20 7142650 7142775 -59525230 - MER94 DNA DNA 0 134 7 1719 41 0 0 chr20 7143261 7143458 -59524547 + L1PA5 LINE L1 5958 6154 0 216 0 0 0 chr20 7144542 7144566 -59523439 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 1983 216 189 6 chr20 7145033 7145562 -59522443 + MLT1E1 LTR MaLR 29 654 0 339 309 114 30 chr20 7145568 7145882 -59522123 + LTR33 LTR ERVL 119 510 -11 426 291 64 21 chr20 7146045 7146186 -59521819 + MIR SINE MIR 8 154 -108 241 290 65 38 chr20 7146263 7146449 -59521556 + L2 LINE L2 3120 3310 -3 216 292 45 22 chr20 7147011 7147100 -59520905 - MIR SINE MIR -55 207 117 2061 133 59 19 chr20 7147126 7147450 -59520555 + MER1B DNA MER1_type 1 337 0 203 146 24 0 chr20 7147522 7147563 -59520442 + GA-rich Low_complexity Low_complexity 1 42 0 207 300 71 14 chr20 7147742 7147812 -59520193 - MIR SINE MIR -97 111 38 222 37 0 0 chr20 7148985 7149012 -59518993 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 180 0 0 0 chr20 7149381 7149401 -59518604 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 399 313 0 17 chr20 7150383 7150562 -59517443 + (TA)n Simple_repeat Simple_repeat 2 177 0 189 0 0 0 chr20 7150681 7150702 -59517303 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 36 53 0 0 chr20 7150888 7150945 -59517060 + GC_rich Low_complexity Low_complexity 1 57 0 213 39 0 0 chr20 7151083 7151109 -59516896 + (CCG)n Simple_repeat Simple_repeat 1 26 0 209 57 29 0 chr20 7152539 7152574 -59515431 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 324 0 0 0 chr20 7153011 7153047 -59514958 + (TG)n Simple_repeat Simple_repeat 2 37 0 180 0 0 0 chr20 7157262 7157282 -59510723 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1931 161 3 3 chr20 7157642 7157953 -59510052 + AluSx SINE Alu 1 311 -1 509 246 87 0 chr20 7158004 7158130 -59509875 + MIR SINE MIR 72 208 -54 271 217 72 14 chr20 7158990 7159059 -59508946 - MER116 DNA Mariner -5 75 3 380 279 137 12 chr20 7159941 7160102 -59507903 + MER5A DNA MER1_type 9 189 0 22 35 0 0 chr20 7160730 7160759 -59507246 + AT_rich Low_complexity Low_complexity 1 29 0 198 71 0 0 chr20 7162502 7162530 -59505475 + (TA)n Simple_repeat Simple_repeat 2 29 0 21 57 0 0 chr20 7164804 7164839 -59503166 + AT_rich Low_complexity Low_complexity 1 35 0 261 0 0 0 chr20 7165712 7165741 -59502264 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 493 228 25 122 chr20 7165949 7166146 -59501859 - MER5A DNA MER1_type -8 181 4 192 231 0 0 chr20 7167085 7167137 -59500868 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 252 143 0 0 chr20 7167886 7167928 -59500077 + (CA)n Simple_repeat Simple_repeat 2 43 0 207 0 0 0 chr20 7168247 7168270 -59499735 + (A)n Simple_repeat Simple_repeat 1 23 0 225 254 0 0 chr20 7169264 7169335 -59498670 + (TA)n Simple_repeat Simple_repeat 1 71 0 2414 64 0 20 chr20 7169377 7169674 -59498331 - AluY SINE Alu -20 291 1 2490 51 0 26 chr20 7170673 7170986 -59497019 - AluY SINE Alu -6 305 1 1665 163 16 6 chr20 7172584 7172897 -59495108 + MER33 DNA MER1_type 6 321 -3 350 339 22 17 chr20 7173102 7173293 -59494712 + MIR SINE MIR 17 206 -56 2071 204 101 39 chr20 7173350 7173884 -59494121 - MLT1F1 LTR MaLR 0 567 1 2296 193 24 15 chr20 7173897 7174352 -59493653 + MER65C LTR ERV1 3 461 0 242 304 149 49 chr20 7175625 7176016 -59491989 - L2 LINE L2 -210 3062 2623 1360 189 227 102 chr20 7176016 7176531 -59491474 + MLT1E1 LTR MaLR 1 599 -55 2095 133 0 13 chr20 7176531 7176833 -59491172 + AluSx SINE Alu 1 298 -14 1360 189 227 102 chr20 7176833 7176898 -59491107 + MLT1E1 LTR MaLR 599 654 0 1243 307 126 45 chr20 7176899 7177909 -59490096 - L2 LINE L2 -688 2626 1536 3394 205 107 41 chr20 7177988 7179425 -59488580 - L1MD2 LINE L1 -69 6684 5162 765 182 0 0 chr20 7179431 7179552 -59488453 + FLAM_C SINE Alu 1 121 -22 2474 218 29 14 chr20 7179574 7180323 -59487682 - L1MD2 LINE L1 -1369 5171 4411 2951 208 101 36 chr20 7180358 7181838 -59486167 - L1MD2 LINE L1 -4643 1897 16 2249 171 44 2 chr20 7182354 7182763 -59485242 - MSTB LTR MaLR 0 426 1 364 321 28 0 chr20 7184920 7185026 -59482979 - L2 LINE L2 -8 3305 3197 234 247 151 32 chr20 7185064 7185157 -59482848 + MER5A DNA MER1_type 6 109 -80 500 152 10 0 chr20 7186161 7186260 -59481745 + CT-rich Low_complexity Low_complexity 1 100 0 2198 132 0 0 chr20 7186260 7186570 -59481435 - AluSx SINE Alu -2 310 1 239 337 49 34 chr20 7186709 7186873 -59481132 - MIR SINE MIR -2 260 91 2377 104 3 0 chr20 7186873 7187182 -59480823 + AluSp SINE Alu 1 310 -3 239 337 49 34 chr20 7187182 7187222 -59480783 - MIR SINE MIR -171 91 53 231 267 0 0 chr20 7187664 7187709 -59480296 - MIR SINE MIR -131 77 33 244 308 17 8 chr20 7187905 7188025 -59479980 + L1MB8 LINE L1 92 212 -6647 373 336 112 20 chr20 7188283 7188578 -59479427 + L1MB8 LINE L1 862 1183 -5672 1782 247 56 79 chr20 7188650 7189036 -59478969 + L1MB8 LINE L1 1190 1583 -5376 2061 119 58 0 chr20 7189036 7189331 -59478674 + AluSx SINE Alu 1 312 0 1782 247 56 79 chr20 7189331 7190173 -59477832 + L1MB8 LINE L1 1583 2393 -4566 349 211 10 19 chr20 7190351 7190455 -59477550 + (TATATG)n Simple_repeat Simple_repeat 5 107 0 2691 237 33 26 chr20 7190592 7191347 -59476658 + L1MB8 LINE L1 5372 6154 -835 1862 89 0 63 chr20 7191347 7191618 -59476387 + AluSq SINE Alu 44 297 -16 2691 237 33 26 chr20 7191618 7191965 -59476040 + L1MB8 LINE L1 6154 6497 -492 4525 171 21 12 chr20 7192092 7192663 -59475342 - L1MB3 LINE L1 -1 6182 5618 2456 34 0 7 chr20 7192663 7192958 -59475047 - AluY SINE Alu -18 293 1 4525 171 21 12 chr20 7192958 7193609 -59474396 - L1MB3 LINE L1 -565 5618 4944 1445 224 78 28 chr20 7193618 7194091 -59473914 + L1MB8 LINE L1 6491 6987 -2 339 25 0 0 chr20 7194173 7194213 -59473792 + (TG)n Simple_repeat Simple_repeat 1 40 0 546 278 74 0 chr20 7195981 7196157 -59471848 - MER5A DNA MER1_type 0 189 1 249 253 35 0 chr20 7196201 7196288 -59471717 - L1ME LINE L1 -316 5805 5716 460 310 150 9 chr20 7196316 7196529 -59471476 - MIR SINE MIR 0 262 20 653 214 26 0 chr20 7196665 7196819 -59471186 + MER45A DNA AcHobo 21 178 0 22 0 0 0 chr20 7197182 7197204 -59470801 + AT_rich Low_complexity Low_complexity 1 22 0 2076 139 3 3 chr20 7197232 7197542 -59470463 - AluSx SINE Alu -2 310 1 367 324 200 0 chr20 7198861 7199006 -59468999 - MER5A DNA MER1_type 0 189 16 1854 97 0 0 chr20 7199692 7199981 -59468024 - L1PA6 LINE L1 -844 5302 5014 6652 68 0 0 chr20 7199981 7200832 -59467173 + L1PA6 LINE L1 5302 6154 0 1946 153 0 25 chr20 7200877 7201197 -59466808 + AluJb SINE Alu 1 312 0 2217 120 73 15 chr20 7201416 7201758 -59466247 + THE1B LTR MaLR 1 362 -2 312 263 120 87 chr20 7202485 7202934 -59465071 - MLT1J LTR MaLR -42 469 6 21 0 0 0 chr20 7203599 7203620 -59464385 + AT_rich Low_complexity Low_complexity 1 21 0 239 331 101 14 chr20 7203799 7203947 -59464058 - MIR3 SINE MIR -4 204 44 354 270 230 14 chr20 7205062 7205210 -59462795 + MER5A DNA MER1_type 4 183 -6 181 227 45 0 chr20 7205474 7205518 -59462487 - L2 LINE L2 0 3313 3268 2020 120 13 27 chr20 7205793 7206093 -59461912 - AluSx SINE Alu -16 296 1 216 261 0 0 chr20 7206587 7206633 -59461372 + GA-rich Low_complexity Low_complexity 2 47 0 1696 190 3 23 chr20 7206971 7207276 -59460729 + AluJo SINE Alu 1 299 -13 282 276 141 29 chr20 7207662 7207832 -59460173 - MIR SINE MIR -52 210 22 207 347 20 31 chr20 7207879 7207977 -59460028 - MIR3 SINE MIR -14 194 98 1045 316 32 52 chr20 7208005 7208186 -59459819 - L2 LINE L2 -1 3312 3129 1908 197 34 12 chr20 7208186 7208602 -59459403 - MSTB LTR MaLR -1 425 1 1045 316 32 52 chr20 7208602 7209197 -59458808 - L2 LINE L2 -184 3129 2548 727 316 56 51 chr20 7209564 7210134 -59457871 - MLT1L LTR MaLR 0 615 43 515 292 103 5 chr20 7210385 7210570 -59457435 - L2 LINE L2 -535 2779 2577 743 239 114 30 chr20 7210572 7210898 -59457107 + MLT1F1 LTR MaLR 1 365 -202 384 295 40 46 chr20 7210904 7210990 -59457015 - L2 LINE L2 -1002 2312 2227 1399 249 0 10 chr20 7210990 7211303 -59456702 + AluJo SINE Alu 1 310 -2 384 295 40 46 chr20 7211303 7211389 -59456616 - L2 LINE L2 -1087 2227 2141 185 0 0 39 chr20 7211390 7211416 -59456589 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 243 79 0 0 chr20 7212895 7212933 -59455072 + (TTTG)n Simple_repeat Simple_repeat 3 40 0 728 324 122 17 chr20 7213872 7214388 -59453617 + L2 LINE L2 2754 3311 -2 233 259 0 0 chr20 7214410 7214468 -59453537 + (CA)n Simple_repeat Simple_repeat 2 59 0 420 311 87 72 chr20 7215339 7215660 -59452345 - L3 LINE CR1 -74 1503 1178 1654 183 20 0 chr20 7216237 7216538 -59451467 + AluSx SINE Alu 1 307 -5 2130 111 4 0 chr20 7217492 7217867 -59450138 + AluSx SINE Alu 1 376 0 1823 174 7 3 chr20 7218131 7218425 -59449580 - AluJb SINE Alu -17 295 1 680 131 16 8 chr20 7219516 7219638 -59448367 - MER65A LTR ERV1 0 445 323 459 282 16 0 chr20 7219951 7220075 -59447930 - MER94 DNA DNA -8 126 1 886 177 27 11 chr20 7220271 7220457 -59447548 - MER5A DNA MER1_type 0 189 1 187 171 29 0 chr20 7220792 7220827 -59447178 + MER5A DNA MER1_type 36 71 -118 213 94 0 0 chr20 7222384 7222416 -59445589 + (ATTG)n Simple_repeat Simple_repeat 3 34 0 1596 143 22 35 chr20 7223051 7223365 -59444640 - L1MC2 LINE L1 -9 6335 6026 238 205 60 24 chr20 7223451 7223534 -59444471 - L1MC2 LINE L1 -1977 5831 5746 301 372 19 6 chr20 7223591 7223747 -59444258 - L1MC2 LINE L1 -2168 5640 5483 681 279 48 24 chr20 7223794 7224045 -59443960 + MIR SINE MIR 6 262 0 708 83 38 8 chr20 7224652 7224784 -59443221 + GA-rich Low_complexity Low_complexity 1 136 0 221 315 210 28 chr20 7226113 7226256 -59441749 + MIR SINE MIR 6 174 -88 826 123 31 15 chr20 7227002 7227132 -59440873 - AluJo/FRAM SINE Alu -14 298 167 346 196 0 0 chr20 7227132 7227188 -59440817 - Alu SINE Alu -246 56 1 353 306 174 27 chr20 7227379 7227637 -59440368 - L3 LINE CR1 -111 1466 1171 243 239 0 0 chr20 7227716 7227783 -59440222 + (TA)n Simple_repeat Simple_repeat 1 67 0 507 167 12 0 chr20 7227809 7227893 -59440112 - AluJ/FLAM SINE Alu -222 90 6 2218 102 3 0 chr20 7228016 7228310 -59439695 - AluSx SINE Alu -17 295 1 195 231 0 77 chr20 7228509 7228561 -59439444 - L2 LINE L2 0 3272 3225 209 339 179 25 chr20 7230110 7230673 -59437332 - L2 LINE L2 -2331 983 334 5954 46 17 5 chr20 7230714 7231498 -59436507 - L1PA7 LINE L1 0 6154 5362 439 259 167 17 chr20 7231939 7232113 -59435892 + MIR SINE MIR 58 257 -5 246 236 396 0 chr20 7233678 7233784 -59434221 + MER5A DNA MER1_type 41 188 -1 306 255 265 51 chr20 7233920 7233963 -59434042 + L2 LINE L2 2537 2569 -745 2148 122 10 0 chr20 7233963 7234259 -59433746 - AluSx SINE Alu -13 299 1 306 255 265 51 chr20 7234259 7234411 -59433594 + L2 LINE L2 2569 2774 -540 2045 125 30 0 chr20 7235063 7235359 -59432646 + AluSx SINE Alu 1 305 -7 4297 113 3 0 chr20 7235474 7236105 -59431900 - MER41B LTR ERV1 0 635 3 707 230 109 27 chr20 7236201 7236705 -59431300 + MLT1G1 LTR MaLR 5 542 0 29 28 0 0 chr20 7236705 7236741 -59431264 + AT_rich Low_complexity Low_complexity 1 36 0 2498 171 29 17 chr20 7237136 7237614 -59430391 - L1PA15 LINE L1 -4 6161 5678 2500 90 0 0 chr20 7238187 7238498 -59429507 - AluSx SINE Alu -1 311 1 358 307 11 0 chr20 7238827 7238915 -59429090 + L2 LINE L2 3223 3311 -2 423 301 82 10 chr20 7239832 7240028 -59427977 + LTR16C LTR ERVL 280 489 -2 667 213 128 11 chr20 7240086 7240274 -59427731 + MER63A DNA MER1_type 1 210 0 1564 201 62 0 chr20 7240387 7240675 -59427330 - AluJb SINE Alu -5 307 2 286 237 43 21 chr20 7240805 7240898 -59427107 - LTR33 LTR ERVL -14 507 413 237 331 32 35 chr20 7242796 7242952 -59425053 + MIR SINE MIR 68 228 -34 22 35 0 0 chr20 7244532 7244561 -59423444 + AT_rich Low_complexity Low_complexity 1 29 0 274 230 160 0 chr20 7244865 7244965 -59423040 + L1MC4 LINE L1 7926 8041 -1 383 278 71 10 chr20 7245922 7246120 -59421885 - L1ME LINE L1 -354 5767 5558 354 267 41 56 chr20 7246148 7246343 -59421662 - L1ME LINE L1 -2495 5500 5309 892 169 111 5 chr20 7248792 7248981 -59419024 + MER3 DNA MER1_type 1 209 0 4837 141 25 11 chr20 7249639 7250583 -59417422 - L1PB4 LINE L1 0 6156 5197 294 355 95 30 chr20 7250958 7251254 -59416751 - L2 LINE L2 -774 2540 2226 181 308 28 137 chr20 7251559 7251770 -59416235 + L2 LINE L2 2994 3181 -91 189 333 0 30 chr20 7252146 7252212 -59415793 + L2 LINE L2 3245 3308 -5 248 333 77 44 chr20 7253021 7253204 -59414801 - MIR3 SINE MIR -17 191 3 306 132 0 0 chr20 7254662 7254715 -59413290 + (CA)n Simple_repeat Simple_repeat 2 54 0 978 121 0 0 chr20 7254808 7254940 -59413065 + AluSq/x SINE Alu 1 132 -180 835 269 31 18 chr20 7255174 7255397 -59412608 + MIR SINE MIR 1 226 -36 212 175 0 0 chr20 7255681 7255721 -59412284 + T-rich Low_complexity Low_complexity 4 43 0 266 307 57 0 chr20 7257007 7257095 -59410910 + MER94 DNA DNA 27 119 -15 384 314 109 0 chr20 7257192 7257329 -59410676 - MIR SINE MIR -27 235 84 226 254 0 0 chr20 7257448 7257503 -59410502 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 1731 76 0 13 chr20 7257530 7257754 -59410251 + AluY SINE Alu 1 221 -90 30 0 0 0 chr20 7257998 7258028 -59409977 + AT_rich Low_complexity Low_complexity 1 30 0 339 130 0 0 chr20 7258028 7258082 -59409923 + (CA)n Simple_repeat Simple_repeat 2 55 0 323 177 35 97 chr20 7258296 7258409 -59409596 + MIR SINE MIR 82 187 -75 1100 142 0 18 chr20 7258642 7258811 -59409194 - AluJb SINE Alu -9 303 138 614 280 15 37 chr20 7259122 7259390 -59408615 - L1ME LINE L1 -376 5794 5533 734 275 108 47 chr20 7259412 7259597 -59408408 + LTR16C LTR ERVL 1 173 -318 2211 106 3 0 chr20 7259597 7259890 -59408115 + AluSg SINE Alu 1 294 -16 734 275 108 47 chr20 7259890 7260130 -59407875 + LTR16C LTR ERVL 173 452 -39 194 156 0 0 chr20 7260233 7260265 -59407740 + L2 LINE L2 3191 3222 -91 233 324 68 54 chr20 7261972 7262120 -59405885 + L3b LINE CR1 1267 1416 -167 2437 74 7 0 chr20 7262163 7262461 -59405544 - AluY SINE Alu -11 300 1 2393 87 0 10 chr20 7262679 7262991 -59405014 + AluY SINE Alu 1 309 -2 2842 16 0 0 chr20 7263030 7263340 -59404665 + AluYb8 SINE Alu 1 310 -8 2307 67 0 29 chr20 7263906 7264218 -59403787 + AluY SINE Alu 1 303 -8 467 282 177 10 chr20 7264329 7264538 -59403467 - MIR SINE MIR 0 262 19 235 266 16 16 chr20 7267952 7268016 -59399989 - MIR3 SINE MIR -11 197 134 370 269 34 67 chr20 7268090 7268209 -59399796 + MIR3 SINE MIR 8 122 -86 2636 55 0 0 chr20 7268577 7268886 -59399119 + AluY SINE Alu 1 309 -2 270 310 63 51 chr20 7270673 7270831 -59397174 + MIR3 SINE MIR 10 169 -39 409 258 94 0 chr20 7271962 7272090 -59395915 - MIR SINE MIR -110 152 13 2272 92 10 0 chr20 7273072 7273366 -59394639 + AluSp SINE Alu 1 297 -16 1870 153 3 3 chr20 7274288 7274612 -59393393 - AluSx SINE Alu 0 324 1 238 265 15 0 chr20 7274643 7274711 -59393294 + (TGAA)n Simple_repeat Simple_repeat 1 69 0 412 261 23 86 chr20 7274718 7274904 -59393101 - MER5A DNA MER1_type 0 189 5 1941 135 44 10 chr20 7275139 7275435 -59392570 + AluSc SINE Alu 1 306 -3 199 330 170 19 chr20 7275609 7275715 -59392290 - L2 LINE L2 -4 3309 3188 198 118 0 0 chr20 7276985 7277019 -59390986 + (T)n Simple_repeat Simple_repeat 1 34 0 528 268 137 0 chr20 7277061 7277214 -59390791 - LTR16A LTR ERVL -119 331 158 321 274 117 85 chr20 7279796 7279884 -59388121 + HAL1 LINE L1 218 302 -2205 804 270 6 0 chr20 7279884 7280058 -59387947 - MER45A DNA AcHobo 0 178 4 321 274 117 85 chr20 7280058 7280192 -59387813 + HAL1 LINE L1 302 447 -2060 2413 89 3 0 chr20 7280328 7280632 -59387373 - AluY SINE Alu -6 305 1 392 222 261 39 chr20 7280798 7281001 -59387004 + MIR SINE MIR 3 250 -12 241 163 23 0 chr20 7280970 7281013 -59386992 + L2 LINE L2 3224 3267 -5 * 183 205 0 0 chr20 7281016 7281055 -59386950 + GA-rich Low_complexity Low_complexity 1 39 0 237 262 97 48 chr20 7281091 7281194 -59386811 + MIR SINE MIR 10 117 -145 387 176 22 34 chr20 7281200 7281289 -59386716 - MLT1H LTR MaLR 0 549 311 537 243 15 7 chr20 7281642 7281778 -59386227 + MIR SINE MIR 122 258 -4 456 303 73 33 chr20 7283032 7283306 -59384699 + LTR16A LTR ERVL 17 301 -149 2181 113 0 0 chr20 7283377 7283668 -59384337 - AluSc SINE Alu -18 291 1 340 271 207 7 chr20 7283738 7283878 -59384127 - MIR SINE MIR -29 233 66 510 242 87 19 chr20 7284189 7284350 -59383655 - LTR33 LTR ERVL -6 515 344 655 197 41 0 chr20 7284364 7284511 -59383494 + Charlie4 DNA MER1_type 1807 1959 -2 315 350 12 31 chr20 7284912 7285072 -59382933 - L2 LINE L2 -585 2729 2573 1113 268 100 11 chr20 7285140 7285509 -59382496 + LTR16C LTR ERVL 90 491 0 257 362 38 31 chr20 7285563 7285881 -59382124 - L2 LINE L2 -787 2527 2208 399 254 0 90 chr20 7286174 7286308 -59381697 + MER94 DNA DNA 1 122 -12 197 196 20 0 chr20 7286391 7286442 -59381563 + GA-rich Low_complexity Low_complexity 1 52 0 244 349 0 0 chr20 7286557 7286640 -59381365 + L2 LINE L2 3190 3272 0 2297 110 0 0 chr20 7286848 7287149 -59380856 + AluSg SINE Alu 1 301 -9 386 241 92 64 chr20 7287155 7287296 -59380709 + MIR SINE MIR 118 262 0 2033 128 31 0 chr20 7287719 7287846 -59380159 + AluSx SINE Alu 1 123 -189 180 0 0 0 chr20 7287846 7287866 -59380139 + (TAAAA)n Simple_repeat Simple_repeat 4 23 0 2033 128 31 0 chr20 7287866 7288028 -59379977 + AluSx SINE Alu 123 299 -13 829 199 78 5 chr20 7288467 7288658 -59379347 + MER3 DNA MER1_type 2 206 -3 542 331 209 21 chr20 7288820 7289345 -59378660 + L2 LINE L2 1995 2618 -696 509 316 118 15 chr20 7289544 7289807 -59378198 + L2 LINE L2 3005 3294 -19 22 0 0 0 chr20 7290131 7290153 -59377852 + AT_rich Low_complexity Low_complexity 1 22 0 29 70 0 0 chr20 7290923 7290980 -59377025 + AT_rich Low_complexity Low_complexity 1 57 0 399 274 72 13 chr20 7291774 7291927 -59376078 + MIR SINE MIR 44 205 -57 559 124 0 67 chr20 7292546 7292651 -59375354 - L1MD1 LINE L1 -8 6234 6137 3095 180 62 9 chr20 7292654 7293316 -59374689 - L1MD2 LINE L1 -276 6083 5387 269 274 11 0 chr20 7293676 7293771 -59374234 + (TA)n Simple_repeat Simple_repeat 1 96 0 1056 235 91 76 chr20 7293910 7294463 -59373542 + L1MC4 LINE L1 7344 7910 -132 288 0 0 0 chr20 7294463 7294495 -59373510 + (TG)n Simple_repeat Simple_repeat 2 33 0 1056 235 91 76 chr20 7294495 7294622 -59373383 + L1MC4 LINE L1 7910 8034 -8 262 269 52 67 chr20 7294736 7294870 -59373135 - MIR3 SINE MIR -52 156 25 553 289 119 64 chr20 7295898 7296209 -59371796 - L2 LINE L2 -1 3271 2944 461 156 10 52 chr20 7296436 7296532 -59371473 + MER5B DNA MER1_type 80 171 -7 4886 93 14 1 chr20 7296750 7297445 -59370560 - L1PB1 LINE L1 -4 6147 5444 1140 189 6 42 chr20 7297461 7297773 -59370232 + L1 LINE L1 5103 5403 -743 1607 184 3 52 chr20 7297810 7298120 -59369885 + AluJo SINE Alu 1 295 -17 219 261 14 14 chr20 7299155 7299224 -59368781 + CT-rich Low_complexity Low_complexity 3 71 0 247 283 0 0 chr20 7299765 7299825 -59368180 + T-rich Low_complexity Low_complexity 3 62 0 1775 161 109 13 chr20 7300294 7300680 -59367325 - MSTC LTR MaLR -5 423 1 972 239 92 52 chr20 7300680 7300973 -59367032 + Charlie4a DNA MER1_type 40 359 -1602 1268 144 27 9 chr20 7300973 7301195 -59366810 + L1PB1 LINE L1 5923 6148 -3 972 239 92 52 chr20 7301195 7301348 -59366657 + Charlie4a DNA MER1_type 359 504 -4 2287 87 10 0 chr20 7301607 7301905 -59366100 + AluSx SINE Alu 1 301 -11 390 259 17 9 chr20 7302299 7302415 -59365590 + Charlie4 DNA MER1_type 40 156 -1805 616 256 29 88 chr20 7302750 7302911 -59365094 + MIR SINE MIR 25 169 -93 2254 109 3 10 chr20 7302911 7303032 -59364973 + AluSx SINE Alu 1 121 -191 189 0 0 0 chr20 7303032 7303053 -59364952 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2254 109 3 10 chr20 7303053 7303234 -59364771 + AluSx SINE Alu 121 301 -11 616 256 29 88 chr20 7303234 7303310 -59364695 + MIR SINE MIR 169 248 -14 200 350 110 20 chr20 7303950 7304050 -59363955 + MIR SINE MIR 36 144 -64 977 327 50 59 chr20 7305463 7306008 -59361997 + MLT1K LTR MaLR 47 586 -2 406 115 0 0 chr20 7306136 7306197 -59361808 - L1PA16 LINE L1 -3 6163 6103 261 328 64 0 chr20 7306433 7306558 -59361447 - MLT1I LTR MaLR -276 133 1 2218 73 0 14 chr20 7306752 7307065 -59360940 - AluY SINE Alu 0 309 1 1569 198 0 17 chr20 7307270 7307563 -59360442 + AluJo SINE Alu 1 288 -24 2318 75 0 0 chr20 7307574 7307892 -59360113 + AluY SINE Alu 1 318 0 197 368 0 26 chr20 7307966 7308080 -59359925 - MIR SINE MIR -147 115 5 21 0 0 0 chr20 7309611 7309632 -59358373 + AT_rich Low_complexity Low_complexity 1 21 0 784 134 31 8 chr20 7309802 7309929 -59358076 + L1PA8 LINE L1 6038 6167 -5 183 391 98 0 chr20 7310127 7310219 -59357786 - L2 LINE L2 -55 3217 3117 2684 33 0 0 chr20 7310359 7310665 -59357340 + AluY SINE Alu 1 306 -5 537 325 72 15 chr20 7310677 7310942 -59357063 + L2 LINE L2 2698 2977 -337 2629 49 0 0 chr20 7311068 7311373 -59356632 - AluY SINE Alu 0 311 7 418 285 54 54 chr20 7311382 7311715 -59356290 + MLT1I LTR MaLR 75 407 -2 275 297 162 7 chr20 7311783 7311931 -59356074 + L2 LINE L2 3113 3283 -30 1745 155 35 11 chr20 7312927 7313211 -59354794 + AluJo SINE Alu 1 291 -21 1492 298 5 0 chr20 7314340 7314726 -59353279 + LTR16C LTR ERVL 104 491 0 1795 173 3 3 chr20 7315435 7315724 -59352281 + AluJb SINE Alu 2 290 -22 2468 209 151 11 chr20 7316574 7317369 -59350636 - L1MD2 LINE L1 0 6359 5454 337 283 20 141 chr20 7318066 7318217 -59349788 - L1MEd LINE L1 -5191 928 831 2372 82 7 13 chr20 7318217 7318520 -59349485 - AluSx SINE Alu -11 301 1 337 283 20 141 chr20 7318520 7318672 -59349333 - L1MEd LINE L1 -5288 831 662 25 31 0 0 chr20 7318906 7318938 -59349067 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr20 7319564 7319585 -59348420 + AT_rich Low_complexity Low_complexity 1 21 0 243 119 0 0 chr20 7319831 7319873 -59348132 + MLT1G1 LTR MaLR 16 57 -538 1535 124 5 0 chr20 7319874 7320084 -59347921 - AluSg/x SINE Alu -7 305 95 981 126 7 7 chr20 7320103 7320246 -59347759 - AluSq/x SINE Alu -170 143 1 1079 269 160 25 chr20 7320247 7320727 -59347278 + MLT1G1 LTR MaLR 51 595 0 195 343 107 29 chr20 7321317 7321457 -59346548 - L2 LINE L2 0 3272 3122 313 263 50 0 chr20 7321722 7321821 -59346184 - L1MC/D LINE L1 -351 5770 5665 2199 110 13 0 chr20 7321865 7322164 -59345841 - AluSx SINE Alu -7 305 3 341 257 18 28 chr20 7322305 7322414 -59345591 + CT-rich Low_complexity Low_complexity 2 109 0 21 89 0 0 chr20 7322423 7322479 -59345526 + AT_rich Low_complexity Low_complexity 1 56 0 635 270 13 0 chr20 7323523 7323675 -59344330 - MER91B DNA MER1_type -35 155 2 548 323 35 19 chr20 7325295 7325552 -59342453 + MIR SINE MIR 2 262 0 214 204 284 34 chr20 7325562 7325650 -59342355 + MIR3 SINE MIR 96 205 -3 1633 86 0 19 chr20 7326561 7326770 -59341235 + AluY SINE Alu 1 205 -106 418 267 167 27 chr20 7327625 7327775 -59340230 + MER5A DNA MER1_type 10 180 -9 324 341 0 0 chr20 7327916 7328004 -59340001 + MIR SINE MIR 37 124 -84 272 158 37 12 chr20 7328548 7328630 -59339375 + (TA)n Simple_repeat Simple_repeat 2 85 0 185 414 45 8 chr20 7328833 7328966 -59339039 + L2 LINE L2 3171 3308 -5 223 273 15 0 chr20 7330327 7330393 -59337612 + (TATATG)n Simple_repeat Simple_repeat 1 67 0 276 241 0 0 chr20 7330394 7330473 -59337532 + (TA)n Simple_repeat Simple_repeat 2 80 0 213 245 0 0 chr20 7330714 7330763 -59337242 - L2 LINE L2 -4 3309 3261 41 66 0 0 chr20 7330907 7330983 -59337022 + AT_rich Low_complexity Low_complexity 1 76 0 489 263 160 5 chr20 7331330 7331543 -59336462 + L1MC4a LINE L1 5604 5849 -1959 25 65 0 0 chr20 7331574 7331620 -59336385 + AT_rich Low_complexity Low_complexity 1 46 0 1857 151 0 26 chr20 7331640 7331945 -59336060 - AluSx SINE Alu -15 297 1 1415 107 20 5 chr20 7332563 7332910 -59335095 + AluSq SINE Alu 2 351 0 330 293 37 53 chr20 7332930 7333118 -59334887 + Charlie8 DNA MER1_type 97 281 -2136 515 309 27 45 chr20 7333233 7333673 -59334332 + L1MC4a LINE L1 4733 5164 -982 2214 100 0 13 chr20 7333675 7333976 -59334029 + AluSx SINE Alu 1 297 -15 2512 245 34 28 chr20 7334052 7334521 -59333484 + L1MC4a LINE L1 5255 5732 -2076 2112 106 0 45 chr20 7334521 7334833 -59333172 + AluSq SINE Alu 1 298 -15 2512 245 34 28 chr20 7334833 7335123 -59332882 + L1MC4a LINE L1 5732 6019 -1789 333 62 0 0 chr20 7335136 7335184 -59332821 + (TG)n Simple_repeat Simple_repeat 2 49 0 4099 214 90 88 chr20 7335186 7336057 -59331948 + L1MC4a LINE L1 6202 7077 -731 2167 116 3 0 chr20 7336057 7336351 -59331654 + AluSq SINE Alu 1 295 -18 4099 214 90 88 chr20 7336351 7337084 -59330921 + L1MC4a LINE L1 7077 7808 0 198 103 0 0 chr20 7340325 7340354 -59327651 + (TC)n Simple_repeat Simple_repeat 2 30 0 4001 204 13 28 chr20 7340665 7341597 -59326408 - L1MB4 LINE L1 -1 6179 5262 208 238 25 25 chr20 7341688 7341768 -59326237 + (TATATG)n Simple_repeat Simple_repeat 3 82 0 531 221 169 0 chr20 7341958 7342112 -59325893 + MIR SINE MIR 12 191 -71 21 0 0 0 chr20 7343196 7343217 -59324788 + AT_rich Low_complexity Low_complexity 1 21 0 1592 143 0 0 chr20 7345938 7346161 -59321844 + AluSx SINE Alu 3 225 -87 23 0 0 0 chr20 7346288 7346311 -59321694 + AT_rich Low_complexity Low_complexity 1 23 0 328 313 0 27 chr20 7347198 7347310 -59320695 - MIR SINE MIR -105 157 49 1824 251 102 16 chr20 7349005 7349506 -59318499 + MLT1H LTR MaLR 6 549 0 1514 228 35 41 chr20 7349705 7350140 -59317865 + MLT1C LTR MaLR 36 467 0 592 226 315 22 chr20 7350762 7351076 -59316929 + L2 LINE L2 2908 3313 0 333 281 26 53 chr20 7351505 7351619 -59316386 - MIR3 SINE MIR -21 187 77 195 100 0 0 chr20 7351664 7351694 -59316311 + (TG)n Simple_repeat Simple_repeat 1 30 0 7727 22 0 0 chr20 7352171 7353260 -59314745 - L1PA3 LINE L1 -3 6152 5064 13241 33 0 0 chr20 7353260 7354882 -59313123 + L1P LINE L1 2288 3909 -2237 592 221 168 0 chr20 7356056 7356205 -59311800 + MER5A DNA MER1_type 9 182 -7 423 246 44 110 chr20 7356601 7356873 -59311132 - MER112 DNA MER1_type -2 254 1 249 57 0 0 chr20 7358589 7358624 -59309381 + (TG)n Simple_repeat Simple_repeat 1 35 0 841 162 100 189 chr20 7359939 7360378 -59307627 + MER57A LTR ERV1 3 402 -1 475 309 0 8 chr20 7360386 7360512 -59307493 - MER5B DNA MER1_type -52 126 2 21 71 0 0 chr20 7360612 7360654 -59307351 + AT_rich Low_complexity Low_complexity 1 42 0 199 347 7 76 chr20 7361896 7362040 -59305965 + L2 LINE L2 2951 3084 -188 358 213 107 41 chr20 7362186 7362308 -59305697 - L1ME4a LINE L1 -18 6103 5974 348 317 35 18 chr20 7362330 7362557 -59305448 - L1ME4a LINE L1 -376 5745 5515 433 302 60 7 chr20 7363399 7363548 -59304457 + MIR SINE MIR 32 188 -74 10761 32 0 1 chr20 7363686 7365750 -59302255 - L1PA4 LINE L1 0 6155 4092 25 90 0 0 chr20 7366230 7366297 -59301708 + AT_rich Low_complexity Low_complexity 1 67 0 481 259 22 44 chr20 7367068 7367203 -59300802 + L1PA13 LINE L1 92 223 -6564 * 5964 227 26 27 chr20 7367202 7369414 -59298591 + L1PA13 LINE L1 1535 3761 -3036 3299 141 13 30 chr20 7369414 7369462 -59298543 + L1PA15 LINE L1 5566 5613 -552 2221 122 3 0 chr20 7369462 7369774 -59298231 + AluSp SINE Alu 1 313 0 3299 141 13 30 chr20 7369774 7370335 -59297670 + L1PA15 LINE L1 5613 6165 0 207 69 0 0 chr20 7370580 7370609 -59297396 + (A)n Simple_repeat Simple_repeat 1 29 0 1726 179 89 0 chr20 7370624 7370948 -59297057 - MSTA LTR MaLR 0 428 76 1983 271 66 47 chr20 7371296 7371853 -59296152 + HAL1 LINE L1 743 1288 -1219 637 199 8 23 chr20 7371853 7371984 -59296021 + FLAM_A SINE Alu 1 129 -4 1983 271 66 47 chr20 7371984 7372579 -59295426 + HAL1 LINE L1 1288 1917 -590 436 252 21 42 chr20 7373059 7373202 -59294803 - MIR SINE MIR -46 216 77 1210 193 161 67 chr20 7373529 7373975 -59294030 + MLT1D LTR MaLR 18 505 0 2038 127 10 58 chr20 7374670 7375064 -59292941 + THE1C LTR MaLR 1 375 0 363 271 35 69 chr20 7375073 7375217 -59292788 + MIR SINE MIR 74 212 -50 998 199 29 42 chr20 7375808 7376049 -59291956 - L1MB5 LINE L1 -7 6167 5930 282 197 0 16 chr20 7376041 7376102 -59291903 + L1M4 LINE L1 5638 5697 -477 * 1997 125 7 4 chr20 7379031 7379334 -59288671 - AluSx SINE Alu 0 308 5 424 198 25 0 chr20 7379666 7379747 -59288258 + MER5A DNA MER1_type 29 111 -78 3594 52 0 0 chr20 7379949 7380392 -59287613 - L1PA5 LINE L1 -11 6143 5701 909 247 5 0 chr20 7380394 7380580 -59287425 + MER5A DNA MER1_type 1 187 -2 662 209 60 45 chr20 7381236 7381437 -59286568 - MER3 DNA MER1_type 0 209 6 188 108 0 27 chr20 7381835 7381872 -59286133 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 273 256 0 0 chr20 7382424 7382506 -59285499 + (CATATA)n Simple_repeat Simple_repeat 3 84 0 794 209 13 6 chr20 7383109 7383267 -59284738 - L1MB5 LINE L1 -40 6134 5976 348 148 89 4 chr20 7383395 7383458 -59284547 - L1MB5 LINE L1 -805 5341 5285 246 62 0 0 chr20 7383458 7383490 -59284515 + (TG)n Simple_repeat Simple_repeat 2 33 0 348 148 89 4 chr20 7383490 7383524 -59284481 - L1MB5 LINE L1 -861 5285 5227 1555 186 58 0 chr20 7383647 7383801 -59284204 - AluJo SINE Alu -22 290 146 189 0 0 0 chr20 7383801 7383822 -59284183 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1555 186 58 0 chr20 7383822 7383941 -59284064 - AluJo SINE Alu -166 146 1 2158 112 32 61 chr20 7384737 7385038 -59282967 + THE1B LTR MaLR 1 290 -74 2135 51 0 111 chr20 7385038 7385370 -59282635 - AluY SINE Alu -16 295 1 2158 112 32 61 chr20 7385370 7385443 -59282562 + THE1B LTR MaLR 290 364 0 188 339 32 0 chr20 7385884 7385946 -59282059 - MIR3 SINE MIR -6 202 139 427 315 95 17 chr20 7385951 7386192 -59281813 + MIR SINE MIR 1 260 -2 186 184 0 0 chr20 7386576 7386614 -59281391 - L2 LINE L2 0 3313 3276 1255 191 14 97 chr20 7387575 7387926 -59280079 - L1MD2 LINE L1 -1 6752 6431 * 1801 255 44 16 chr20 7387915 7388626 -59279379 - L1MD2 LINE L1 -841 5699 4998 * 4688 173 44 19 chr20 7388624 7388716 -59279289 + L1 LINE L1 4342 4430 -1716 2241 125 0 6 chr20 7388716 7389029 -59278976 + AluSx SINE Alu 2 312 0 4688 173 44 19 chr20 7389029 7389963 -59278042 + L1 LINE L1 4430 5394 -752 756 276 18 25 chr20 7389950 7390206 -59277799 + L1M4 LINE L1 4650 4905 -1241 * 2730 128 20 39 chr20 7390206 7390713 -59277292 + L1MA7 LINE L1 5785 6281 -10 756 276 18 25 chr20 7390713 7390731 -59277274 + L1M4 LINE L1 4905 4922 -1224 * 4574 243 67 49 chr20 7390717 7391647 -59276358 - L1MD2 LINE L1 -1529 5011 4099 192 77 0 0 chr20 7391647 7391673 -59276332 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 4574 243 67 49 chr20 7391673 7391971 -59276034 - L1MD2 LINE L1 -2441 4099 3808 2191 122 3 0 chr20 7391971 7392275 -59275730 - AluSq SINE Alu -8 305 1 4574 243 67 49 chr20 7392275 7393189 -59274816 - L1MD2 LINE L1 -2732 3808 2830 994 242 180 39 chr20 7393206 7393723 -59274282 - L1MD2 LINE L1 -4091 2449 1860 2507 158 30 20 chr20 7393723 7394287 -59273718 + MER41B LTR ERV1 1 635 0 529 198 83 13 chr20 7394287 7394444 -59273561 - L1MD2 LINE L1 -4677 1863 1696 590 332 74 16 chr20 7395212 7395456 -59272549 - MIR SINE MIR 0 262 5 202 98 24 49 chr20 7395513 7395554 -59272451 + (CAA)n Simple_repeat Simple_repeat 3 42 0 368 366 67 5 chr20 7395574 7395768 -59272237 - MIR SINE MIR -10 252 47 250 232 0 36 chr20 7396932 7396988 -59271017 - L2 LINE L2 -12 3260 3207 198 171 0 0 chr20 7397646 7397687 -59270318 + (TG)n Simple_repeat Simple_repeat 2 42 0 22 70 0 0 chr20 7398340 7398383 -59269622 + AT_rich Low_complexity Low_complexity 1 43 0 234 318 15 0 chr20 7400325 7400391 -59267614 + L2 LINE L2 3247 3313 0 218 241 11 0 chr20 7402014 7402101 -59265904 + (TA)n Simple_repeat Simple_repeat 2 89 0 270 81 0 0 chr20 7402172 7402209 -59265796 + (TG)n Simple_repeat Simple_repeat 2 38 0 1415 191 36 22 chr20 7403290 7403568 -59264437 + AluJo SINE Alu 1 282 -30 238 418 0 0 chr20 7403998 7404108 -59263897 - MIR SINE MIR -107 155 46 29 78 0 0 chr20 7404140 7404204 -59263801 + AT_rich Low_complexity Low_complexity 1 64 0 2378 119 10 44 chr20 7404555 7404943 -59263062 + THE1C LTR MaLR 1 375 0 9241 129 36 52 chr20 7404943 7405454 -59262551 + THE1C-int LTR MaLR 1 519 -1061 2389 62 0 0 chr20 7405454 7405742 -59262263 + AluY SINE Alu 22 309 -2 9241 129 36 52 chr20 7405742 7406827 -59261178 + THE1C-int LTR MaLR 519 1571 -9 2506 119 11 3 chr20 7406837 7407207 -59260798 + THE1C LTR MaLR 3 375 0 406 300 45 37 chr20 7408530 7408732 -59259273 - MIR SINE MIR -30 232 20 279 0 0 0 chr20 7409234 7409265 -59258740 + (TG)n Simple_repeat Simple_repeat 1 31 0 427 145 0 40 chr20 7412558 7412634 -59255371 - Charlie3 DNA MER1_type -7 2703 2631 832 163 8 143 chr20 7412856 7413108 -59254897 + MER20 DNA MER1_type 1 218 -1 289 308 221 28 chr20 7413589 7413911 -59254094 + L3 LINE CR1 562 945 -632 347 283 279 21 chr20 7413965 7414248 -59253757 + L3 LINE CR1 1096 1451 -126 269 239 37 46 chr20 7414512 7414621 -59253384 - MER103 DNA DNA 0 166 59 24 32 0 0 chr20 7414621 7414652 -59253353 + AT_rich Low_complexity Low_complexity 1 31 0 198 345 0 0 chr20 7414983 7415041 -59252964 + L2 LINE L2 3214 3271 -1 1690 134 77 0 chr20 7415170 7415467 -59252538 + AluSx SINE Alu 1 317 0 234 0 0 0 chr20 7415934 7415960 -59252045 + (A)n Simple_repeat Simple_repeat 1 26 0 2079 138 26 0 chr20 7416128 7416432 -59251573 - AluSx SINE Alu 0 312 1 2171 134 3 0 chr20 7417752 7418109 -59249896 - AluSx SINE Alu 0 358 1 456 310 113 78 chr20 7418363 7418542 -59249463 + L2 LINE L2 1395 1566 -1748 2542 96 28 6 chr20 7418542 7418898 -59249107 + THE1B LTR MaLR 1 364 0 456 310 113 78 chr20 7418898 7419476 -59248529 + L2 LINE L2 1566 2179 -1135 181 225 22 11 chr20 7419477 7419566 -59248439 + CT-rich Low_complexity Low_complexity 1 90 0 209 275 62 38 chr20 7419629 7419709 -59248296 + L2 LINE L2 3198 3279 -34 1344 218 13 67 chr20 7419720 7420096 -59247909 - MLT1A2 LTR MaLR -4 370 15 829 186 19 6 chr20 7420142 7420303 -59247702 - MER3 DNA MER1_type -46 163 1 2260 98 0 3 chr20 7420322 7420617 -59247388 + AluSg SINE Alu 1 294 -16 615 323 154 45 chr20 7420680 7421529 -59246476 + L2 LINE L2 2305 3267 -5 250 346 68 23 chr20 7422086 7422219 -59245786 + MIR SINE MIR 11 149 -113 217 169 138 31 chr20 7422302 7422367 -59245638 + MIR SINE MIR 185 256 -6 1636 149 19 39 chr20 7422639 7422948 -59245057 + L1MA4A LINE L1 5980 6282 -21 405 0 0 0 chr20 7422949 7422994 -59245011 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 35 0 0 chr20 7423070 7423099 -59244906 + AT_rich Low_complexity Low_complexity 1 29 0 540 223 36 54 chr20 7423468 7423634 -59244371 - MER20 DNA MER1_type -53 166 4 24 0 0 0 chr20 7423836 7423860 -59244145 + AT_rich Low_complexity Low_complexity 1 24 0 726 262 55 75 chr20 7425168 7425553 -59242452 - L1ME3 LINE L1 -7 6155 5779 660 254 15 5 chr20 7425588 7425785 -59242220 - L1MC4 LINE L1 -534 7508 7310 991 253 12 52 chr20 7425845 7426173 -59241832 - L1ME3 LINE L1 -377 5787 5473 2624 264 38 14 chr20 7426297 7427184 -59240821 - L1MC4 LINE L1 -156 7886 6978 1901 241 97 32 chr20 7427362 7427948 -59240057 + MLT1E2 LTR MaLR 3 626 0 2206 101 7 0 chr20 7427978 7428275 -59239730 - AluSp SINE Alu -14 299 1 23 33 0 0 chr20 7429416 7429446 -59238559 + AT_rich Low_complexity Low_complexity 1 30 0 184 345 76 41 chr20 7429802 7429973 -59238032 - L2 LINE L2 -181 3091 2915 397 191 54 176 chr20 7430830 7430911 -59237094 - MER97b DNA MER1_type? -874 179 136 2401 60 3 0 chr20 7430911 7431211 -59236794 - AluY SINE Alu -8 303 3 397 191 54 176 chr20 7431211 7431333 -59236672 - MER97b DNA MER1_type? -917 136 1 1556 272 86 2 chr20 7431342 7431761 -59236244 + MLT1H LTR MaLR 88 541 -8 1098 223 65 87 chr20 7431973 7432376 -59235629 - MSTD LTR MaLR 0 396 3 2419 260 58 13 chr20 7432418 7433320 -59234685 - L1ME1 LINE L1 -3 6163 5225 207 69 0 0 chr20 7433461 7433490 -59234515 + (TG)n Simple_repeat Simple_repeat 2 30 0 2128 256 47 11 chr20 7433496 7434028 -59233977 + MLT1F1 LTR MaLR 7 557 -10 237 158 35 18 chr20 7434028 7434085 -59233920 + (TA)n Simple_repeat Simple_repeat 1 58 0 1726 277 97 29 chr20 7434101 7436579 -59231426 - L1ME3 LINE L1 -64 6378 3685 1203 263 113 42 chr20 7436629 7437762 -59230243 - L1ME3 LINE L1 -2824 3602 2390 248 25 50 0 chr20 7437785 7437825 -59230180 - Alu SINE Alu -3 297 256 329 282 155 50 chr20 7437942 7438304 -59229701 - L1ME3 LINE L1 -4343 2264 1865 1521 203 4 0 chr20 7438332 7438598 -59229407 + AluJb SINE Alu 7 273 -39 353 256 44 48 chr20 7438674 7438966 -59229039 - L1ME3 LINE L1 -4924 1683 1193 340 279 39 101 chr20 7438972 7439230 -59228775 - L1ME3 LINE L1 -5097 1329 1089 2518 68 0 0 chr20 7439282 7439593 -59228412 - AluY SINE Alu 0 311 1 468 299 63 31 chr20 7440623 7440833 -59227172 + LTR33 LTR ERVL 3 203 -318 250 246 62 0 chr20 7440890 7440955 -59227050 + LTR33A LTR ERVL 302 370 -153 2145 178 28 19 chr20 7441018 7441440 -59226565 - MSTB LTR MaLR 0 426 1 1000 189 58 10 chr20 7441440 7441646 -59226359 - MSTB-int LTR MaLR 0 1651 1436 417 151 0 14 chr20 7441649 7441722 -59226283 + MST-int LTR MaLR 583 654 -997 297 137 0 123 chr20 7441801 7441874 -59226131 + MST-int LTR MaLR 583 646 -1005 4125 232 85 55 chr20 7441937 7443248 -59224757 - MSTB-int LTR MaLR -228 1352 3 1984 188 57 5 chr20 7443250 7443655 -59224350 - MSTB LTR MaLR 0 426 1 379 350 32 10 chr20 7443681 7443927 -59224078 - L2 LINE L2 -283 2989 2740 21 0 0 0 chr20 7446486 7446507 -59221498 + AT_rich Low_complexity Low_complexity 1 21 0 1621 193 17 32 chr20 7446764 7447111 -59220894 + MER2 DNA MER2_type 2 343 -1 256 305 9 9 chr20 7447582 7447687 -59220318 + GA-rich Low_complexity Low_complexity 4 108 0 300 242 73 65 chr20 7447722 7447846 -59220159 + HAL1b LINE L1 1142 1266 -82 23 33 0 0 chr20 7447953 7447983 -59220022 + AT_rich Low_complexity Low_complexity 1 30 0 223 183 49 7 chr20 7447983 7448125 -59219880 + (TA)n Simple_repeat Simple_repeat 2 149 0 676 189 0 23 chr20 7448192 7448324 -59219681 - FLAM_C SINE Alu 0 133 5 21 0 0 0 chr20 7448426 7448447 -59219558 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr20 7449682 7449706 -59218299 + AT_rich Low_complexity Low_complexity 1 24 0 5116 101 0 7 chr20 7450122 7450866 -59217139 + L1PB1 LINE L1 5411 6149 -2 25 0 0 0 chr20 7450868 7450893 -59217112 + AT_rich Low_complexity Low_complexity 1 25 0 219 295 16 0 chr20 7450893 7450954 -59217051 - MIR SINE MIR -69 139 78 303 272 210 31 chr20 7451116 7451311 -59216694 - L1ME LINE L1 -455 5711 5482 246 267 27 0 chr20 7451364 7451439 -59216566 - L1ME1 LINE L1 -10 6156 6080 1005 226 99 36 chr20 7451634 7452019 -59215986 + LTR37A LTR ERV1 1 409 -17 1741 150 7 3 chr20 7452061 7452348 -59215657 + AluSx SINE Alu 24 311 -1 228 146 0 0 chr20 7452404 7452445 -59215560 - AluJb SINE Alu -5 297 257 262 348 54 5 chr20 7453401 7453780 -59214225 - LTR16B LTR ERVL -9 452 9 456 260 182 19 chr20 7454410 7454564 -59213441 + MER5A DNA MER1_type 10 188 -1 845 264 45 45 chr20 7455722 7456036 -59211969 + MLT1A1 LTR MaLR 52 365 0 398 169 67 0 chr20 7456081 7456170 -59211835 - L1MB8 LINE L1 -2 6176 6082 1029 215 0 5 chr20 7456170 7456370 -59211635 + MER2 DNA MER2_type 8 206 -139 25 51 0 0 chr20 7456370 7456409 -59211596 + AT_rich Low_complexity Low_complexity 1 39 0 3643 197 49 7 chr20 7456476 7457129 -59210876 - L1MB7 LINE L1 -76 6344 5720 236 29 0 29 chr20 7457129 7457163 -59210842 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 2088 116 3 0 chr20 7457165 7457449 -59210556 - AluSp SINE Alu -28 285 1 3643 197 49 7 chr20 7457449 7457833 -59210172 - L1MB7 LINE L1 -700 5720 5258 668 170 0 0 chr20 7457836 7457948 -59210057 + AluJo/FLAM SINE Alu 1 112 -200 547 241 9 0 chr20 7457946 7458062 -59209943 - AluJb SINE Alu -64 248 132 * 4635 231 45 52 chr20 7458087 7459756 -59208249 - L1MB7 LINE L1 -1107 5275 3619 1655 281 56 22 chr20 7459829 7460874 -59207131 - L1MB7 LINE L1 -3330 3052 1965 249 273 0 0 chr20 7460881 7460958 -59207047 + (TA)n Simple_repeat Simple_repeat 1 77 0 551 280 6 17 chr20 7460973 7461148 -59206857 - L1MB7 LINE L1 -4560 1824 1652 3447 205 28 11 chr20 7461154 7461943 -59206062 - L1MC3 LINE L1 -17 7768 6967 1914 168 55 44 chr20 7461943 7462501 -59205504 + MLT2A2 LTR ERVL 1 554 0 5941 191 31 59 chr20 7462501 7464001 -59204004 - L1MC3 LINE L1 -814 6971 5513 1655 277 31 16 chr20 7463987 7464558 -59203447 - L1MB7 LINE L1 -4724 1660 1081 * 205 167 0 0 chr20 7465216 7465252 -59202753 + (CAT)n Simple_repeat Simple_repeat 1 36 0 21 0 0 0 chr20 7465288 7465309 -59202696 + AT_rich Low_complexity Low_complexity 1 21 0 2147 156 60 26 chr20 7467840 7468308 -59199697 - L1MB3 LINE L1 -3 6180 5697 25 0 0 0 chr20 7468543 7468568 -59199437 + AT_rich Low_complexity Low_complexity 1 25 0 519 168 26 26 chr20 7469310 7469465 -59198540 + CT-rich Low_complexity Low_complexity 4 158 0 201 392 0 25 chr20 7469469 7469589 -59198416 + C-rich Low_complexity Low_complexity 5 121 0 * 473 246 14 5 chr20 7469507 7469736 -59198269 + CT-rich Low_complexity Low_complexity 1 231 0 264 342 37 104 chr20 7470053 7470436 -59197569 + L2 LINE L2 2914 3270 -2 919 324 81 40 chr20 7470752 7471453 -59196552 + L1MB5 LINE L1 77 806 -5736 * 1850 262 21 7 chr20 7471428 7472008 -59195997 + L1MB5 LINE L1 4441 5028 -1616 950 209 5 0 chr20 7472013 7472223 -59195782 + L1MB5 LINE L1 5341 5551 -1093 3850 197 40 16 chr20 7472232 7473099 -59194906 + L1MB5 LINE L1 5785 6672 0 302 260 62 0 chr20 7473108 7473204 -59194801 + L1MC4 LINE L1 7004 7105 -937 484 202 18 30 chr20 7473210 7473378 -59194627 + GA-rich Low_complexity Low_complexity 1 166 0 1172 297 24 29 chr20 7473378 7473870 -59194135 + L1MC4 LINE L1 7250 7739 -303 619 220 19 31 chr20 7473888 7474047 -59193958 + LTR41 LTR ERVL 8 164 -609 233 211 46 37 chr20 7474601 7474710 -59193295 + LTR41 LTR ERVL 657 766 -7 1444 226 72 46 chr20 7474767 7475228 -59192777 - MLT1D LTR MaLR -2 503 31 198 0 0 0 chr20 7475518 7475540 -59192465 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 337 339 23 4 chr20 7475689 7475943 -59192062 + ERVL LTR ERVL 455 671 -4983 1032 246 11 19 chr20 7476298 7476566 -59191439 + ERVL LTR ERVL 3732 3997 -1657 975 153 101 5 chr20 7476579 7476788 -59191217 + L1MA9 LINE L1 6084 6312 0 642 236 55 12 chr20 7476810 7476975 -59191030 + ERVL LTR ERVL 4096 4267 -1497 4049 181 39 6 chr20 7477041 7477944 -59190061 - L1PB4 LINE L1 -91 6065 5129 2460 288 31 40 chr20 7477954 7478805 -59189200 + ERVL LTR ERVL 4274 5116 -648 17803 208 47 14 chr20 7478830 7479256 -59188749 + L1M1 LINE L1 102 513 -7183 2349 78 7 3 chr20 7479256 7479563 -59188442 - AluSc SINE Alu -1 308 1 17803 208 47 14 chr20 7479563 7485731 -59182274 + L1M1 LINE L1 513 6944 -752 1122 119 0 43 chr20 7485735 7485920 -59182085 + AluSc SINE Alu 132 308 -1 1687 79 31 0 chr20 7485932 7486160 -59181845 + L1M1 LINE L1 6933 7167 -554 4036 114 14 3 chr20 7486199 7486832 -59181173 + L1MA1 LINE L1 5663 6302 0 503 199 62 43 chr20 7487062 7487223 -59180782 + LTR41 LTR ERVL 1 164 -609 248 274 216 20 chr20 7487785 7487938 -59180067 + LTR41 LTR ERVL 584 766 -7 30 93 0 0 chr20 7488185 7488271 -59179734 + AT_rich Low_complexity Low_complexity 1 86 0 423 0 0 0 chr20 7488711 7488758 -59179247 + (CA)n Simple_repeat Simple_repeat 2 48 0 2177 92 0 52 chr20 7489126 7489453 -59178552 + AluY SINE Alu 1 310 -1 23 0 0 0 chr20 7489545 7489568 -59178437 + AT_rich Low_complexity Low_complexity 1 23 0 2214 136 3 6 chr20 7489568 7489922 -59178083 - L1PB1 LINE L1 -8 6143 5791 216 0 0 0 chr20 7489935 7489959 -59178046 + (TA)n Simple_repeat Simple_repeat 1 24 0 315 311 0 0 chr20 7489968 7490058 -59177947 - L1MC4 LINE L1 -1339 6703 6614 209 233 0 0 chr20 7490058 7490101 -59177904 + (TA)n Simple_repeat Simple_repeat 1 43 0 924 222 77 42 chr20 7490101 7490412 -59177593 + L1ME2 LINE L1 5520 5841 -323 435 207 24 0 chr20 7490415 7490497 -59177508 + MLT1A1 LTR MaLR 6 89 -285 1438 229 11 4 chr20 7490544 7490823 -59177182 + MLT1A1 LTR MaLR 85 365 0 771 253 55 46 chr20 7490836 7491166 -59176839 + L1ME2 LINE L1 5832 6161 -5 295 269 81 62 chr20 7491363 7491523 -59176482 + MIR SINE MIR 26 188 -74 287 322 68 17 chr20 7491846 7491964 -59176041 + L2 LINE L2 3190 3313 0 21 0 0 0 chr20 7492415 7492436 -59175569 + AT_rich Low_complexity Low_complexity 1 21 0 2476 70 0 0 chr20 7492835 7493134 -59174871 + AluY SINE Alu 1 299 -12 25 65 0 0 chr20 7493226 7493272 -59174733 + AT_rich Low_complexity Low_complexity 1 46 0 1068 238 33 119 chr20 7493373 7493953 -59174052 + L1MC4 LINE L1 7487 8016 -26 2178 116 0 0 chr20 7494224 7494517 -59173488 + AluSq SINE Alu 1 293 -20 362 250 162 27 chr20 7496643 7496791 -59171214 + MER5A DNA MER1_type 22 189 0 738 160 29 130 chr20 7497321 7497559 -59170446 - MER20 DNA MER1_type 0 219 6 188 220 80 20 chr20 7497753 7497803 -59170202 - L3 LINE CR1 -94 1483 1431 381 298 224 0 chr20 7497897 7498102 -59169903 + MIR SINE MIR 12 262 0 413 256 95 70 chr20 7498340 7498582 -59169423 + L1ME3A LINE L1 5914 6161 -9 243 0 0 0 chr20 7499540 7499567 -59168438 + (T)n Simple_repeat Simple_repeat 1 27 0 43123 28 23 1 chr20 7499580 7505598 -59162407 - L1HS LINE L1 0 6155 2 189 0 0 0 chr20 7508048 7508069 -59159936 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 5977 6 0 0 chr20 7508074 7508740 -59159265 - L1PA2 LINE L1 0 6155 5490 21 0 0 0 chr20 7508746 7508767 -59159238 + AT_rich Low_complexity Low_complexity 1 21 0 1733 165 4 4 chr20 7509161 7509434 -59158571 - AluSx SINE Alu -39 273 1 262 219 73 89 chr20 7509509 7509582 -59158423 - MIR SINE MIR -120 142 69 1119 206 99 19 chr20 7509582 7509868 -59158137 + AluJo SINE Alu 1 307 0 262 219 73 89 chr20 7509868 7509916 -59158089 - MIR SINE MIR -193 69 22 502 321 57 25 chr20 7512069 7512228 -59155777 + MER91A DNA MER1_type 1 164 -32 213 291 73 27 chr20 7514448 7514558 -59153447 + MIR3 SINE MIR 75 189 -19 181 286 0 0 chr20 7515796 7515838 -59152167 + L2 LINE L2 3224 3265 -7 355 224 49 14 chr20 7518552 7518695 -59149310 + (TATAA)n Simple_repeat Simple_repeat 5 152 0 236 118 0 20 chr20 7518802 7518853 -59149152 + (TG)n Simple_repeat Simple_repeat 2 51 0 1561 177 17 17 chr20 7518912 7519200 -59148805 - AluJb SINE Alu -21 291 4 264 122 0 0 chr20 7519859 7519900 -59148105 + (GGAA)n Simple_repeat Simple_repeat 3 43 0 486 49 0 0 chr20 7519914 7519975 -59148030 + (GAGAA)n Simple_repeat Simple_repeat 4 64 0 21 36 0 0 chr20 7521433 7521461 -59146544 + AT_rich Low_complexity Low_complexity 1 28 0 251 344 104 8 chr20 7523051 7523176 -59144829 - MIR SINE MIR -107 155 19 2458 110 30 0 chr20 7524025 7524389 -59143616 + THE1C LTR MaLR 1 375 0 2311 97 3 3 chr20 7525048 7525357 -59142648 - AluSc SINE Alu 0 309 1 3246 164 43 3 chr20 7525419 7526000 -59142005 - MER6A DNA MER2_type 0 605 2 204 40 0 0 chr20 7526011 7526036 -59141969 + (CA)n Simple_repeat Simple_repeat 1 25 0 1109 185 99 30 chr20 7526050 7526352 -59141653 + MER33 DNA MER1_type 2 324 0 822 316 68 38 chr20 7526934 7527775 -59140230 + L2 LINE L2 2437 3312 -1 2392 84 0 3 chr20 7528260 7528559 -59139446 + AluSc SINE Alu 1 298 -11 184 91 45 0 chr20 7528791 7528835 -59139170 + (TA)n Simple_repeat Simple_repeat 1 46 0 31 58 0 0 chr20 7529109 7529161 -59138844 + AT_rich Low_complexity Low_complexity 1 52 0 365 371 45 0 chr20 7531318 7531520 -59136485 - MIR SINE MIR -1 261 51 189 0 0 0 chr20 7532984 7533005 -59135000 + (TAA)n Simple_repeat Simple_repeat 2 22 0 307 390 13 6 chr20 7533132 7533291 -59134714 - MIR SINE MIR -66 196 37 201 290 84 46 chr20 7533746 7533877 -59134128 + MIR SINE MIR 81 216 -46 1666 172 34 30 chr20 7533904 7534201 -59133804 - AluJo SINE Alu -14 298 1 205 365 17 26 chr20 7534454 7534569 -59133436 - MIR SINE MIR -120 142 29 483 232 42 36 chr20 7535554 7535722 -59132283 - MIR SINE MIR -3 259 91 22 0 0 0 chr20 7535956 7535978 -59132027 + AT_rich Low_complexity Low_complexity 1 22 0 180 277 46 15 chr20 7536312 7536377 -59131628 - L2 LINE L2 -12 3260 3194 1299 221 10 3 chr20 7536747 7537055 -59130950 + MER33 DNA MER1_type 15 324 0 190 374 58 19 chr20 7540368 7540523 -59127482 - L2 LINE L2 -247 3025 2865 221 0 0 33 chr20 7540630 7540660 -59127345 + (TTA)n Simple_repeat Simple_repeat 2 30 0 623 292 171 13 chr20 7541100 7541405 -59126600 - MLT1K LTR MaLR -63 525 173 23 78 0 0 chr20 7541635 7541686 -59126319 + AT_rich Low_complexity Low_complexity 1 51 0 2418 77 3 3 chr20 7542058 7542369 -59125636 + AluY SINE Alu 1 311 0 23 0 0 0 chr20 7542558 7542581 -59125424 + AT_rich Low_complexity Low_complexity 1 23 0 193 333 91 30 chr20 7542872 7543004 -59125001 + MIR3 SINE MIR 16 155 -53 1678 151 91 26 chr20 7545956 7546308 -59121697 + THE1C LTR MaLR 1 375 0 9536 127 20 44 chr20 7546308 7546735 -59121270 + THE1C-int LTR MaLR 1 437 -1143 1991 141 3 3 chr20 7546735 7547053 -59120952 - AluSx SINE Alu 0 318 1 9536 127 20 44 chr20 7547053 7548241 -59119764 + THE1C-int LTR MaLR 437 1579 -1 1759 144 75 39 chr20 7548242 7548604 -59119401 + THE1C LTR MaLR 1 375 0 1875 89 114 0 chr20 7549144 7549415 -59118590 - AluSc SINE Alu -7 302 1 25 75 0 0 chr20 7550202 7550255 -59117750 + AT_rich Low_complexity Low_complexity 1 53 0 254 291 17 109 chr20 7550418 7550505 -59117500 + MIR3 SINE MIR 7 72 -136 470 299 44 29 chr20 7550505 7550709 -59117296 + MER63A DNA MER1_type 1 207 -3 254 291 17 109 chr20 7550709 7550796 -59117209 + MIR3 SINE MIR 72 165 -43 426 297 61 12 chr20 7552815 7552980 -59115025 + MIR SINE MIR 29 201 -61 988 246 80 42 chr20 7553843 7554204 -59113801 - LTR16A1 LTR ERVL 0 457 83 360 270 35 40 chr20 7554550 7554724 -59113281 + MER46C DNA MER2_type 82 254 -84 22 0 0 0 chr20 7554759 7554781 -59113224 + AT_rich Low_complexity Low_complexity 1 22 0 304 352 125 36 chr20 7554964 7555268 -59112737 - L3 LINE CR1 -65 1512 1182 332 304 54 0 chr20 7555726 7555818 -59112187 + L2 LINE L2 3190 3286 -27 22 0 0 0 chr20 7556618 7556640 -59111365 + AT_rich Low_complexity Low_complexity 1 22 0 26 74 0 0 chr20 7557637 7557691 -59110314 + AT_rich Low_complexity Low_complexity 1 54 0 229 346 90 26 chr20 7557710 7557866 -59110139 + MIR3 SINE MIR 40 205 -3 237 65 0 0 chr20 7557996 7558027 -59109978 + (CA)n Simple_repeat Simple_repeat 2 32 0 691 274 29 19 chr20 7558090 7558274 -59109731 - MER63A DNA MER1_type -1478 210 22 2614 176 43 43 chr20 7558274 7558836 -59109169 + MER68 LTR ERV1 1 562 0 691 274 29 19 chr20 7558836 7558859 -59109146 - MER63A DNA MER1_type -1666 22 1 192 40 0 0 chr20 7558978 7559003 -59109002 + (TG)n Simple_repeat Simple_repeat 2 26 0 21 36 0 0 chr20 7559167 7559195 -59108810 + AT_rich Low_complexity Low_complexity 1 28 0 2144 118 36 36 chr20 7559251 7559615 -59108390 - THE1B LTR MaLR 0 364 1 9704 106 93 1 chr20 7559615 7561059 -59106946 - THE1B-int LTR MaLR 0 1580 3 2129 137 42 25 chr20 7561061 7561419 -59106586 - THE1B LTR MaLR 0 364 1 369 215 0 0 chr20 7562451 7562544 -59105461 + (TA)n Simple_repeat Simple_repeat 2 94 0 249 327 95 39 chr20 7563131 7563467 -59104538 + L2 LINE L2 550 904 -2410 1264 197 39 55 chr20 7563535 7563844 -59104161 - AluJo SINE Alu -8 304 1 1753 204 33 3 chr20 7564387 7564755 -59103250 - L1MB5 LINE L1 -8 6166 5788 291 157 0 0 chr20 7564763 7564814 -59103191 + (TA)n Simple_repeat Simple_repeat 2 52 0 1899 109 29 7 chr20 7564828 7565103 -59102902 + THE1B LTR MaLR 84 364 0 656 251 5 44 chr20 7565131 7565334 -59102671 - L1M4 LINE L1 -5506 1036 842 807 33 17 25 chr20 7565352 7565472 -59102533 + (TTTC)n Simple_repeat Simple_repeat 2 120 0 406 125 0 0 chr20 7565472 7565528 -59102477 - AluJo SINE Alu -32 280 225 * 795 216 0 6 chr20 7565526 7565688 -59102317 - AluJo SINE Alu -151 161 1 492 279 0 0 chr20 7565704 7565826 -59102179 - L1M4 LINE L1 -5788 754 633 1696 216 8 8 chr20 7566507 7566872 -59101133 + MLT1A1 LTR MaLR 1 365 0 2380 32 0 0 chr20 7568520 7568802 -59099203 + L1PA4 LINE L1 5864 6145 -10 271 267 112 9 chr20 7568958 7569074 -59098931 + MER5C DNA MER1_type 4 131 -193 1403 204 7 25 chr20 7569261 7569541 -59098464 + L1MDa LINE L1 15 289 -6251 337 253 0 0 chr20 7569526 7569601 -59098404 + L1M4 LINE L1 3508 3582 -2564 * 386 276 29 12 chr20 7569598 7569768 -59098237 + L1M4 LINE L1 4339 4511 -1635 619 341 101 31 chr20 7571151 7571606 -59096399 + LTR16C LTR ERVL 5 491 0 562 319 173 35 chr20 7571609 7571985 -59096020 + MLT1K LTR MaLR 157 584 -4 262 273 162 32 chr20 7573548 7573702 -59094303 - MLT1H LTR MaLR -4 545 372 377 299 138 24 chr20 7574060 7574227 -59093778 + MER63A DNA MER1_type 22 207 -3 24 32 0 0 chr20 7575449 7575480 -59092525 + AT_rich Low_complexity Low_complexity 1 31 0 1050 213 29 42 chr20 7575631 7575870 -59092135 + AluJb SINE Alu 65 300 -12 2245 116 0 0 chr20 7577527 7577837 -59090168 + AluSg SINE Alu 1 310 0 1846 144 0 21 chr20 7578017 7578386 -59089619 - AluSx SINE Alu 0 367 5 467 143 12 12 chr20 7578544 7578628 -59089377 - AluJ/FLAM SINE Alu -226 86 3 968 117 0 21 chr20 7578720 7578865 -59089140 + AluSg/x SINE Alu 154 295 -15 26 74 0 0 chr20 7579549 7579603 -59088402 + AT_rich Low_complexity Low_complexity 1 54 0 225 339 68 8 chr20 7579848 7579966 -59088039 - L2 LINE L2 -12 3260 3136 3294 138 15 4 chr20 7579998 7580547 -59087458 - L1MB1 LINE L1 -1 6167 5613 1649 169 36 36 chr20 7581947 7582249 -59085756 + AluJo SINE Alu 6 307 -5 21 57 0 0 chr20 7583682 7583717 -59084288 + AT_rich Low_complexity Low_complexity 1 35 0 181 189 11 44 chr20 7583785 7583875 -59084130 + (TA)n Simple_repeat Simple_repeat 2 88 0 742 210 55 110 chr20 7585318 7585452 -59082553 + MER5A DNA MER1_type 1 122 -67 1678 98 140 11 chr20 7585452 7585717 -59082288 - AluSg SINE Alu -1 299 1 742 210 55 110 chr20 7585717 7585782 -59082223 + MER5A DNA MER1_type 122 189 0 261 308 83 19 chr20 7586614 7586770 -59081235 + MIR SINE MIR 97 262 0 228 159 95 0 chr20 7586785 7586848 -59081157 + L1MC4 LINE L1 6624 6692 -1350 192 40 0 0 chr20 7586851 7586876 -59081129 + (GA)n Simple_repeat Simple_repeat 2 26 0 1345 224 22 32 chr20 7586885 7587197 -59080808 - MLT2D LTR ERVL -105 309 1 361 292 10 10 chr20 7587864 7587960 -59080045 + MER5A DNA MER1_type 1 96 -93 2832 221 70 44 chr20 7588011 7588958 -59079047 + L1MDa LINE L1 998 1974 -4566 2250 107 3 0 chr20 7588958 7589257 -59078748 - AluSx SINE Alu -12 300 1 2832 221 70 44 chr20 7589257 7589303 -59078702 + L1MDa LINE L1 1974 2017 -4523 372 306 100 0 chr20 7589322 7589482 -59078523 + MLT1J1 LTR MaLR 9 184 -262 291 279 82 93 chr20 7589524 7589707 -59078298 + MLT1J2 LTR MaLR 263 443 -7 180 111 0 0 chr20 7590489 7590516 -59077489 + (GA)n Simple_repeat Simple_repeat 2 28 0 1477 198 128 22 chr20 7591703 7592061 -59075944 + MSTD LTR MaLR 1 396 0 207 100 0 0 chr20 7592535 7592565 -59075440 + (TAA)n Simple_repeat Simple_repeat 3 32 0 297 314 109 7 chr20 7592574 7592711 -59075294 - MIR SINE MIR -17 245 95 249 308 23 85 chr20 7592776 7592837 -59075168 - L2 LINE L2 0 3272 3222 1198 188 109 10 chr20 7592837 7593130 -59074875 - MER33 DNA MER1_type -2 322 1 249 308 23 85 chr20 7593130 7593198 -59074807 - L2 LINE L2 -50 3222 3151 * 1033 292 62 22 chr20 7593189 7593590 -59074415 - L2 LINE L2 -367 2947 2531 827 247 25 81 chr20 7593704 7594097 -59073908 + LTR37B LTR ERV1 98 468 0 290 231 93 19 chr20 7595188 7595296 -59072709 - MLT1H LTR MaLR -15 534 419 2586 46 0 3 chr20 7595508 7595812 -59072193 + AluY SINE Alu 1 303 -8 21 0 0 0 chr20 7595840 7595861 -59072144 + AT_rich Low_complexity Low_complexity 1 21 0 230 209 0 0 chr20 7595882 7595925 -59072080 - MLT1H LTR MaLR -387 162 120 839 194 57 110 chr20 7596608 7596871 -59071134 + AluJo SINE Alu 30 278 -34 463 185 19 9 chr20 7596888 7596996 -59071009 - L1MB7 LINE L1 -27 6157 6049 * 6196 164 30 5 chr20 7596995 7597680 -59070325 + L1M1 LINE L1 10 731 -6834 186 43 0 0 chr20 7597680 7597703 -59070302 + (GGAGA)n Simple_repeat Simple_repeat 4 26 0 6196 164 30 5 chr20 7597703 7598044 -59069961 + L1M1 LINE L1 731 1062 -6503 535 242 181 74 chr20 7598748 7599117 -59068888 + L2 LINE L2 2622 3030 -283 182 292 180 11 chr20 7599610 7599699 -59068306 + MIR3 SINE MIR 2 105 -103 642 113 0 10 chr20 7599780 7599906 -59068099 + FLAM_A SINE Alu 19 143 0 4823 254 63 47 chr20 7600053 7601877 -59066128 - L1M4c LINE L1 -4602 2355 560 1786 105 0 8 chr20 7601877 7602125 -59065880 + AluSg SINE Alu 32 277 -33 186 43 0 0 chr20 7602130 7602153 -59065852 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4823 254 63 47 chr20 7602153 7602655 -59065350 - L1M4c LINE L1 -6400 557 11 226 325 72 0 chr20 7602940 7603023 -59064982 - MIR SINE MIR -171 91 3 287 339 62 0 chr20 7603112 7603242 -59064763 + MIR SINE MIR 91 228 -34 473 268 203 7 chr20 7603703 7603856 -59064149 + MER5A DNA MER1_type 3 185 -4 254 350 38 42 chr20 7604123 7604360 -59063645 + L2 LINE L2 2877 3112 -160 733 184 13 0 chr20 7604363 7604597 -59063408 + CT-rich Low_complexity Low_complexity 1 237 0 293 346 0 0 chr20 7604657 7604735 -59063270 + L2 LINE L2 3133 3210 -62 517 252 9 0 chr20 7604868 7604979 -59063026 - L2 LINE L2 -12 3301 3190 31 82 0 0 chr20 7605258 7605331 -59062674 + AT_rich Low_complexity Low_complexity 1 73 0 6287 171 26 27 chr20 7605428 7605464 -59062541 - L1MA4A LINE L1 -6 6999 6964 2292 120 50 36 chr20 7605464 7605823 -59062182 + THE1B LTR MaLR 1 364 0 6287 171 26 27 chr20 7605823 7606182 -59061823 - L1MA4A LINE L1 -41 6964 6606 1717 167 0 14 chr20 7606182 7606470 -59061535 + AluSx SINE Alu 1 284 -28 216 0 0 0 chr20 7606473 7606497 -59061508 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 6287 171 26 27 chr20 7606497 7608509 -59059496 - L1MA4A LINE L1 -401 6604 4582 5547 219 52 12 chr20 7608511 7609798 -59058207 - L1MA4A LINE L1 -4724 2125 787 1534 201 7 14 chr20 7610334 7610623 -59057382 - AluJb SINE Alu -25 287 1 219 188 0 0 chr20 7610798 7610898 -59057107 + GA-rich Low_complexity Low_complexity 1 100 0 29 28 0 0 chr20 7610989 7611025 -59056980 + AT_rich Low_complexity Low_complexity 1 36 0 21 82 0 0 chr20 7611431 7611480 -59056525 + AT_rich Low_complexity Low_complexity 1 49 0 223 122 41 0 chr20 7611891 7611940 -59056065 + (TTAAA)n Simple_repeat Simple_repeat 2 52 0 1622 175 0 14 chr20 7612595 7612886 -59055119 - AluJb SINE Alu -25 287 1 621 289 83 14 chr20 7613466 7613684 -59054321 + MIR SINE MIR 4 236 -26 685 258 46 116 chr20 7615157 7615502 -59052503 + MLT1G LTR MaLR 2 322 -273 338 265 20 10 chr20 7615610 7615708 -59052297 + MLT1G LTR MaLR 444 542 -13 3385 226 71 29 chr20 7615961 7616832 -59051173 + L1M4 LINE L1 14 921 -5621 24 53 0 0 chr20 7617014 7617052 -59050953 + AT_rich Low_complexity Low_complexity 1 38 0 318 258 21 11 chr20 7617278 7617371 -59050634 - L1M4 LINE L1 -3600 2546 2453 180 0 0 0 chr20 7617508 7617528 -59050477 + (TTG)n Simple_repeat Simple_repeat 2 21 0 21 36 0 0 chr20 7617698 7617726 -59050279 + AT_rich Low_complexity Low_complexity 1 28 0 424 159 45 144 chr20 7617978 7618110 -59049895 + L1M4 LINE L1 587 705 -5837 326 244 24 0 chr20 7619389 7619471 -59048534 + MER81 DNA DNA 31 114 0 1200 66 28 44 chr20 7619547 7619728 -59048277 + L1PA11 LINE L1 5996 6173 -1 1496 330 33 22 chr20 7619740 7620343 -59047662 + ERVL LTR ERVL 3135 3744 -2020 558 333 40 35 chr20 7620403 7620808 -59047197 + ERVL LTR ERVL 4788 5194 -570 1188 58 17 6 chr20 7622149 7622323 -59045682 + (TTTC)n Simple_repeat Simple_repeat 1 176 0 1928 157 7 0 chr20 7622328 7622634 -59045371 - AluSx SINE Alu -4 308 1 492 188 45 0 chr20 7622823 7622935 -59045070 - L1MA8 LINE L1 -5 6286 6170 21 0 0 0 chr20 7622966 7622987 -59045018 + AT_rich Low_complexity Low_complexity 1 21 0 537 239 54 129 chr20 7623985 7624357 -59043648 - MLT1H LTR MaLR -165 384 41 1524 187 22 4 chr20 7625411 7625689 -59042316 - AluJo SINE Alu -29 283 1 1078 201 62 0 chr20 7625709 7625918 -59042087 + AluJo SINE Alu 79 300 -12 2181 120 3 0 chr20 7626234 7626534 -59041471 - AluSx SINE Alu -11 301 1 1540 249 60 40 chr20 7626534 7627284 -59040721 - L1M4 LINE L1 -2293 3853 3089 308 296 75 14 chr20 7627556 7627831 -59040174 - MER20B DNA MER1_type -432 351 1 776 213 58 16 chr20 7627839 7628027 -59039978 + MER3 DNA MER1_type 1 196 -13 577 333 162 19 chr20 7628237 7628706 -59039299 - L3 LINE CR1 -698 879 344 410 311 22 15 chr20 7628711 7628846 -59039159 - MIR SINE MIR -102 160 25 260 173 113 196 chr20 7628853 7628986 -59039019 + MLT1E LTR MaLR 1 122 -471 2103 111 7 3 chr20 7629322 7629610 -59038395 - AluSx SINE Alu -23 289 1 403 300 111 12 chr20 7629767 7630020 -59037985 + L1ME4a LINE L1 5558 5835 -286 200 167 45 30 chr20 7630043 7630109 -59037896 + (CATATA)n Simple_repeat Simple_repeat 5 71 0 21 0 0 0 chr20 7630262 7630283 -59037722 + AT_rich Low_complexity Low_complexity 1 21 0 2069 133 0 10 chr20 7630844 7631146 -59036859 - AluSc SINE Alu -10 299 1 246 226 19 0 chr20 7631619 7631672 -59036333 + GA-rich Low_complexity Low_complexity 2 55 0 568 297 53 19 chr20 7633306 7633515 -59034490 - MIR SINE MIR 0 262 47 320 60 75 0 chr20 7633624 7633691 -59034314 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 284 280 5 0 chr20 7635690 7635780 -59032225 + MIR SINE MIR 98 187 -62 291 268 0 61 chr20 7636713 7636795 -59031210 - L2 LINE L2 0 3313 3237 2203 98 0 32 chr20 7637175 7637491 -59030514 - AluSg SINE Alu -4 306 1 297 155 0 0 chr20 7640258 7640316 -59027689 + A-rich Low_complexity Low_complexity 3 60 0 393 22 0 0 chr20 7640954 7641000 -59027005 + (CA)n Simple_repeat Simple_repeat 1 46 0 210 348 22 0 chr20 7642429 7642521 -59025484 + CT-rich Low_complexity Low_complexity 2 95 0 1079 218 84 14 chr20 7642712 7642996 -59025009 + MER2 DNA MER2_type 41 344 -1 873 271 166 56 chr20 7643081 7643617 -59024388 + MLT1H1 LTR MaLR 1 555 0 23 0 0 0 chr20 7643701 7643724 -59024281 + AT_rich Low_complexity Low_complexity 1 23 0 1045 179 0 0 chr20 7643804 7643977 -59024028 - FRAM SINE Alu 0 176 4 7471 31 2 0 chr20 7644321 7645663 -59022342 - L1PA4 LINE L1 -1 6154 4808 185 0 40 0 chr20 7645847 7645872 -59022133 + (TA)n Simple_repeat Simple_repeat 1 26 0 2156 108 0 10 chr20 7645874 7646198 -59021807 - AluSc SINE Alu 0 321 1 392 245 82 0 chr20 7648124 7648222 -59019783 - MER5A DNA MER1_type -80 109 4 526 159 58 43 chr20 7648303 7648441 -59019564 + MER53 DNA DNA 50 189 0 375 287 57 8 chr20 7648458 7648580 -59019425 - MER5B DNA MER1_type -50 128 1 207 275 211 37 chr20 7648592 7648701 -59019304 - MIR SINE MIR -61 147 20 738 193 14 21 chr20 7648938 7649078 -59018927 - MER5B DNA MER1_type -39 139 1 24 53 0 0 chr20 7649392 7649430 -59018575 + AT_rich Low_complexity Low_complexity 1 38 0 517 178 5 140 chr20 7650754 7650939 -59017066 + MER53 DNA DNA 3 157 -32 1121 195 30 128 chr20 7650939 7651344 -59016661 - MLT1A1 LTR MaLR 0 365 1 517 178 5 140 chr20 7651344 7651372 -59016633 + MER53 DNA DNA 157 187 -2 2896 144 43 14 chr20 7651895 7652456 -59015549 - L1MA4 LINE L1 -1 6299 5723 229 296 12 0 chr20 7653480 7653561 -59014444 + (TA)n Simple_repeat Simple_repeat 1 82 0 180 0 0 0 chr20 7656401 7656421 -59011584 + (TTG)n Simple_repeat Simple_repeat 2 21 0 525 279 23 17 chr20 7656745 7656917 -59011088 - MER69 DNA AcHobo -1053 173 1 2323 109 0 0 chr20 7656950 7657252 -59010753 - AluSg SINE Alu -8 302 1 479 157 39 10 chr20 7658095 7658197 -59009808 - L1MC1 LINE L1 -5 6328 6224 237 139 0 0 chr20 7658844 7658887 -59009118 + (TG)n Simple_repeat Simple_repeat 2 44 0 8256 51 0 2 chr20 7659737 7661548 -59006457 + L1PA5 LINE L1 4343 6151 -3 499 353 134 35 chr20 7661685 7662402 -59005603 - L2 LINE L2 -337 2977 2190 322 250 28 94 chr20 7663234 7663414 -59004591 + L2 LINE L2 3146 3313 0 1917 145 10 3 chr20 7663978 7664274 -59003731 - AluSx SINE Alu -14 298 1 1219 175 47 132 chr20 7664893 7665357 -59002648 - L1MB8 LINE L1 -1 6177 5753 288 338 25 55 chr20 7666222 7666423 -59001582 + L2 LINE L2 2888 3082 -190 719 230 67 11 chr20 7666696 7666874 -59001131 + MER5A DNA MER1_type 1 188 -1 652 185 8 23 chr20 7666970 7667100 -59000905 - L1MC4a LINE L1 -1052 6756 6629 258 32 0 0 chr20 7667107 7667138 -59000867 + (TG)n Simple_repeat Simple_repeat 1 31 0 1252 179 60 13 chr20 7667210 7667444 -59000561 - AluJb SINE Alu -67 245 1 747 231 29 29 chr20 7667449 7667657 -59000348 - L1MC3 LINE L1 -1260 6525 6318 343 240 20 113 chr20 7668886 7669036 -58998969 - MER5A DNA MER1_type -18 171 36 234 128 0 0 chr20 7670185 7670224 -58997781 + (TG)n Simple_repeat Simple_repeat 2 40 0 596 210 123 65 chr20 7670884 7671093 -58996912 - MIR SINE MIR 0 262 40 285 98 0 0 chr20 7671188 7671229 -58996776 + (TCTA)n Simple_repeat Simple_repeat 3 43 0 471 87 0 0 chr20 7671230 7671299 -58996706 + (TCCC)n Simple_repeat Simple_repeat 4 72 0 186 43 0 0 chr20 7671305 7671328 -58996677 + (CCTA)n Simple_repeat Simple_repeat 1 23 0 10853 165 59 87 chr20 7671330 7674137 -58993868 - Tigger4(Zombi) DNA MER2_type -2 2729 2 1866 167 24 12 chr20 7674224 7674553 -58993452 - MER1B DNA MER1_type 0 339 7 819 158 5 49 chr20 7674589 7674773 -58993232 + L1MA5A LINE L1 6120 6295 -2 946 187 130 23 chr20 7675302 7675578 -58992427 - MER33 DNA MER1_type -25 299 1 200 225 0 0 chr20 7676311 7676351 -58991654 + CT-rich Low_complexity Low_complexity 2 41 0 1927 202 11 0 chr20 7676620 7676981 -58991024 + MLT1A1 LTR MaLR 1 365 0 2815 3 0 0 chr20 7677097 7677401 -58990604 - AluYa5 SINE Alu -7 304 1 320 236 47 123 chr20 7677431 7677643 -58990362 - L1MC4 LINE L1 -11 8031 7836 398 206 328 0 chr20 7677708 7677839 -58990166 - L1ME2 LINE L1 -75 6089 5916 6293 79 14 2 chr20 7679373 7680771 -58987234 - L1PA10 LINE L1 -5 6163 4770 6847 215 53 24 chr20 7681145 7682479 -58985526 - L1MB3 LINE L1 -7 6176 4882 5436 11 0 0 chr20 7682479 7683092 -58984913 - L1PA2 LINE L1 0 6155 5543 6847 215 53 24 chr20 7683092 7684578 -58983427 - L1MB3 LINE L1 -1301 4882 3273 505 192 113 7 chr20 7686766 7686917 -58981088 + MER53 DNA DNA 19 185 -4 202 291 36 82 chr20 7686923 7687033 -58980972 - MER5B DNA MER1_type -72 106 2 189 214 0 0 chr20 7687056 7687098 -58980907 + (CA)n Simple_repeat Simple_repeat 2 43 0 208 302 188 0 chr20 7687510 7687606 -58980399 - L2 LINE L2 -1 3312 3199 210 118 0 0 chr20 7687731 7687765 -58980240 + (A)n Simple_repeat Simple_repeat 1 34 0 558 234 185 17 chr20 7688859 7689089 -58978916 - MIR SINE MIR 0 262 16 775 235 34 0 chr20 7689967 7690146 -58977859 - MER5A DNA MER1_type -4 185 1 3267 166 75 19 chr20 7690536 7691204 -58976801 + MER44D DNA MER2_type 1 705 0 23 0 0 0 chr20 7691381 7691404 -58976601 + AT_rich Low_complexity Low_complexity 1 23 0 1759 191 29 9 chr20 7691523 7691863 -58976142 + MER7A DNA MER2_type 2 346 0 35 63 0 0 chr20 7691914 7691977 -58976028 + AT_rich Low_complexity Low_complexity 1 63 0 1279 201 44 91 chr20 7692624 7693033 -58974972 - MLT1B LTR MaLR 0 390 1 306 357 11 10 chr20 7693171 7693338 -58974667 + MIR SINE MIR 6 174 -63 737 258 128 47 chr20 7693432 7693924 -58974081 - L1MC4a LINE L1 -1644 6164 5633 348 283 26 35 chr20 7694384 7694612 -58973393 + CT-rich Low_complexity Low_complexity 1 225 0 266 307 23 11 chr20 7696830 7696918 -58971087 + MIR3 SINE MIR 109 197 -11 231 248 0 28 chr20 7697389 7697498 -58970507 + (TA)n Simple_repeat Simple_repeat 1 106 0 1564 70 0 0 chr20 7697938 7698138 -58969867 - L1PA8 LINE L1 -425 5706 5507 3114 122 0 0 chr20 7698138 7698602 -58969403 + L1PA8 LINE L1 5705 6172 0 1638 199 27 0 chr20 7699078 7699379 -58968626 + AluJb SINE Alu 1 309 -3 207 0 0 0 chr20 7699729 7699752 -58968253 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 393 252 14 119 chr20 7700291 7700509 -58967496 - L1ME1 LINE L1 -81 6085 5891 * 1154 249 84 12 chr20 7700506 7700924 -58967081 - L1MEc LINE L1 -4273 2123 1676 3081 269 40 26 chr20 7701092 7702264 -58965741 - L1ME1 LINE L1 -1450 4696 3508 340 266 1 2 chr20 7702295 7702408 -58965597 + L1M3 LINE L1 5331 5442 -726 * 16763 109 11 26 chr20 7702397 7704380 -58963625 + L1P3 LINE L1 666 2621 -3840 193 29 59 0 chr20 7704380 7704414 -58963591 + (CAA)n Simple_repeat Simple_repeat 1 36 0 16763 109 11 26 chr20 7704414 7705491 -58962514 + L1P3 LINE L1 2621 3713 -2748 628 133 0 20 chr20 7705491 7705589 -58962416 + AluSg/x SINE Alu 198 293 -16 2911 177 0 18 chr20 7705590 7706149 -58961856 + L1P3 LINE L1 4222 4770 -1691 414 311 8 0 chr20 7706155 7706274 -58961731 - L2 LINE L2 -474 2840 2721 1714 190 5 60 chr20 7706340 7706724 -58961281 - MLT1A1 LTR MaLR -2 363 1 794 297 125 9 chr20 7706801 7707144 -58960861 - MLT1J2 LTR MaLR -64 386 4 244 123 15 31 chr20 7707814 7707879 -58960126 + CT-rich Low_complexity Low_complexity 4 67 0 181 307 23 11 chr20 7707914 7708002 -58960003 + MIR3 SINE MIR 113 201 -7 25 31 0 0 chr20 7708626 7708658 -58959347 + AT_rich Low_complexity Low_complexity 1 32 0 235 337 31 10 chr20 7709220 7709318 -58958687 + L2 LINE L2 2277 2376 -938 207 214 18 0 chr20 7709363 7709419 -58958586 + (CAAA)n Simple_repeat Simple_repeat 4 60 0 631 309 120 34 chr20 7709420 7709972 -58958033 + L2 LINE L2 2446 3060 -212 532 274 54 18 chr20 7710598 7710766 -58957239 - MLT1J1 LTR MaLR -264 182 9 530 125 0 19 chr20 7710954 7711058 -58956947 - L1MA4 LINE L1 -5 6295 6194 298 350 24 0 chr20 7711976 7712099 -58955906 + MIR3 SINE MIR 2 127 -81 333 281 139 50 chr20 7712104 7712342 -58955663 + L1ME LINE L1 5521 5779 -383 1523 293 52 9 chr20 7712526 7713079 -58954926 + L1ME3 LINE L1 5573 6149 -13 199 307 92 79 chr20 7713990 7714218 -58953787 + L3 LINE CR1 486 716 -861 1033 279 81 16 chr20 7714293 7714717 -58953288 - MLT1H LTR MaLR -55 494 1 719 280 5 11 chr20 7714800 7714989 -58953016 + MER63A DNA MER1_type 23 210 0 2072 122 135 23 chr20 7715061 7715446 -58952559 - MSTA LTR MaLR 0 428 1 197 298 18 0 chr20 7716512 7716569 -58951436 - L2 LINE L2 -234 3038 2981 323 333 151 33 chr20 7716701 7717098 -58950907 - L2 LINE L2 -568 2746 2303 1304 119 67 0 chr20 7717098 7717308 -58950697 + MSTB1 LTR MaLR 209 432 0 211 390 12 0 chr20 7718366 7718448 -58949557 - MIR SINE MIR -167 95 13 303 28 0 0 chr20 7718493 7718529 -58949476 + (TG)n Simple_repeat Simple_repeat 2 37 0 38 98 0 0 chr20 7718750 7718872 -58949133 + AT_rich Low_complexity Low_complexity 1 122 0 217 264 19 0 chr20 7720009 7720062 -58947943 - MIR SINE MIR -85 177 124 312 347 0 20 chr20 7720434 7720532 -58947473 + MER91A DNA MER1_type 101 196 0 408 315 51 30 chr20 7720745 7720942 -58947063 - L1ME3 LINE L1 -251 5911 5711 2010 247 77 52 chr20 7721326 7722050 -58945955 + MER21B LTR ERV1 24 765 -98 416 236 14 74 chr20 7722578 7722726 -58945279 - MER21B LTR ERV1 -111 752 614 26 50 0 0 chr20 7722978 7723018 -58944987 + AT_rich Low_complexity Low_complexity 1 40 0 711 182 19 19 chr20 7723329 7723483 -58944522 + MLT1A1 LTR MaLR 10 163 -202 1895 226 3 0 chr20 7723484 7723821 -58944184 + L1MA4A LINE L1 1015 1352 -5497 3267 163 31 8 chr20 7723822 7724428 -58943577 + L1MA4A LINE L1 4179 4798 -2050 339 25 0 0 chr20 7724428 7724468 -58943537 + (TTA)n Simple_repeat Simple_repeat 3 42 0 1538 48 0 0 chr20 7724468 7724657 -58943348 - L1PA4 LINE L1 -18 6137 5949 3895 20 7 0 chr20 7724657 7725106 -58942899 + L1PA4 LINE L1 5445 5896 -259 * 5578 176 38 10 chr20 7725104 7727257 -58940748 + L1MA4A LINE L1 4779 7001 -4 927 214 23 14 chr20 7728047 7728262 -58939743 + MLT1A1 LTR MaLR 147 363 -2 23 33 0 0 chr20 7728356 7728386 -58939619 + AT_rich Low_complexity Low_complexity 1 30 0 682 276 118 0 chr20 7728769 7728972 -58939033 + MIR SINE MIR 33 259 -3 790 29 19 0 chr20 7729018 7729123 -58938882 + (TCTA)n Simple_repeat Simple_repeat 4 110 0 220 324 68 14 chr20 7729361 7729435 -58938570 - L2 LINE L2 -4 3309 3232 * 232 325 74 31 chr20 7729420 7729583 -58938422 + L2 LINE L2 3125 3294 -19 253 281 32 73 chr20 7730008 7730165 -58937840 - MIR SINE MIR -64 144 41 360 0 0 0 chr20 7730325 7730365 -58937640 + (CA)n Simple_repeat Simple_repeat 2 41 0 229 264 19 0 chr20 7731377 7731430 -58936575 + CT-rich Low_complexity Low_complexity 3 56 0 398 284 29 0 chr20 7731431 7731533 -58936472 - L2 LINE L2 -5 3267 3163 1047 348 95 39 chr20 7731905 7732951 -58935054 - L2 LINE L2 -386 2928 1825 265 295 26 0 chr20 7733289 7733367 -58934638 - MLT1H LTR MaLR -16 533 454 613 299 43 29 chr20 7733472 7733753 -58934252 - MLT1H LTR MaLR -260 289 5 241 333 139 55 chr20 7733764 7734570 -58933435 - L2 LINE L2 -2058 1256 383 1460 184 35 21 chr20 7736728 7737011 -58930994 + AluJo SINE Alu 11 297 -15 532 277 143 9 chr20 7737088 7737319 -58930686 - MIR SINE MIR 0 262 1 210 180 20 0 chr20 7737390 7737440 -58930565 + T-rich Low_complexity Low_complexity 3 53 0 206 209 0 0 chr20 7737481 7737524 -58930481 + MIR SINE MIR 37 79 -129 544 320 88 50 chr20 7738664 7739202 -58928803 - L2 LINE L2 -6 3307 2755 602 286 62 0 chr20 7739209 7739387 -58928618 - MER5A DNA MER1_type 0 189 1 259 389 8 8 chr20 7739641 7739772 -58928233 + MLT1K LTR MaLR 353 483 -105 187 346 126 31 chr20 7740715 7740874 -58927131 + L2 LINE L2 3099 3272 0 370 243 178 104 chr20 7742209 7742613 -58925392 - MLT1H LTR MaLR -114 435 2 300 286 79 87 chr20 7743870 7743996 -58924009 - MIR SINE MIR -109 153 29 2168 122 73 12 chr20 7747000 7747343 -58920662 + THE1B LTR MaLR 1 364 0 11375 99 11 0 chr20 7747343 7748905 -58919100 + THE1B-int LTR MaLR 1 1580 0 2054 131 76 17 chr20 7748905 7749249 -58918756 + THE1B LTR MaLR 1 364 0 452 275 113 14 chr20 7749348 7749490 -58918515 - MER5A DNA MER1_type -12 177 22 245 228 16 145 chr20 7749619 7749812 -58918193 - MLT1H LTR MaLR 0 549 382 228 290 160 10 chr20 7749842 7749942 -58918063 - MLT1H LTR MaLR -325 224 110 181 113 0 57 chr20 7750292 7750345 -58917660 + (TTTTA)n Simple_repeat Simple_repeat 3 52 0 790 239 51 10 chr20 7751348 7751545 -58916460 - MER3 DNA MER1_type 0 209 5 242 313 0 0 chr20 7751750 7751817 -58916188 - MIR SINE MIR -19 243 177 321 26 0 0 chr20 7751957 7751995 -58916010 + (TG)n Simple_repeat Simple_repeat 2 39 0 557 224 26 0 chr20 7752790 7752906 -58915099 + MER94 DNA DNA 3 121 -13 30 0 0 0 chr20 7753222 7753252 -58914753 + AT_rich Low_complexity Low_complexity 1 30 0 1947 112 44 4 chr20 7753291 7753633 -58914372 - L1P4 LINE L1 -603 5565 5212 3621 102 11 0 chr20 7753633 7754154 -58913851 + L1PA10 LINE L1 5630 6157 -11 1682 232 93 24 chr20 7754194 7754831 -58913174 + MER20B DNA MER1_type 77 773 -10 585 235 92 7 chr20 7754849 7755002 -58913003 + MER5A DNA MER1_type 1 166 -23 222 37 0 0 chr20 7755932 7755959 -58912046 + (TG)n Simple_repeat Simple_repeat 2 28 0 2005 132 35 0 chr20 7757097 7757386 -58910619 - AluSx SINE Alu -13 299 1 294 296 224 0 chr20 7757424 7757549 -58910456 + MER5A DNA MER1_type 31 183 -6 1862 162 38 12 chr20 7757718 7758057 -58909948 - MER7A DNA MER2_type 0 346 1 1970 157 0 10 chr20 7758229 7758541 -58909464 + AluJo SINE Alu 3 311 -1 2034 280 78 28 chr20 7758634 7759427 -58908578 + L1MEc LINE L1 93 925 -5471 32 57 0 0 chr20 7759429 7759482 -58908523 + AT_rich Low_complexity Low_complexity 1 53 0 204 214 0 0 chr20 7759698 7759740 -58908265 + (CATATA)n Simple_repeat Simple_repeat 5 46 0 323 333 14 7 chr20 7759848 7759986 -58908019 + L2 LINE L2 2915 3053 -219 242 175 0 0 chr20 7760471 7760511 -58907494 - MLT2C1 LTR ERVL -8 389 350 346 211 56 0 chr20 7760559 7760630 -58907375 + MLT2B1 LTR ERVL 57 131 -389 186 43 0 0 chr20 7760689 7760712 -58907293 + (TAGA)n Simple_repeat Simple_repeat 4 26 0 1046 297 105 17 chr20 7760712 7761130 -58906875 - MLT2B1 LTR ERVL -65 455 1 23590 202 28 31 chr20 7761132 7761180 -58906825 - ERVL-B1 LTR ERVL -9 5755 5708 1630 117 47 112 chr20 7761180 7761357 -58906648 + THE1C LTR MaLR 1 188 -187 1559 127 0 0 chr20 7761357 7761578 -58906427 - AluSg/x SINE Alu -7 305 85 1630 117 47 112 chr20 7761578 7761801 -58906204 + THE1C LTR MaLR 188 375 0 23590 202 28 31 chr20 7761801 7763796 -58904209 - ERVL-B1 LTR ERVL -56 5708 3709 1438 225 22 32 chr20 7763796 7764165 -58903840 + MLT1A1 LTR MaLR 1 365 0 23590 202 28 31 chr20 7764165 7764507 -58903498 - ERVL-B1 LTR ERVL -2055 3709 3368 315 0 0 0 chr20 7764507 7764542 -58903463 + (CA)n Simple_repeat Simple_repeat 2 36 0 23590 202 28 31 chr20 7764542 7765993 -58902012 - ERVL-B1 LTR ERVL -2396 3368 1915 2218 190 36 5 chr20 7765993 7766409 -58901596 + MSTB1 LTR MaLR 4 432 0 23590 202 28 31 chr20 7766409 7766994 -58901011 - ERVL-B1 LTR ERVL -3849 1915 1330 3275 117 10 0 chr20 7766994 7767488 -58900517 - L1PA13 LINE L1 0 6163 5665 23590 202 28 31 chr20 7767488 7768088 -58899917 - ERVL-B1 LTR ERVL -4434 1330 744 2631 196 16 2 chr20 7768109 7768687 -58899318 + L1MA4A LINE L1 4102 4687 -1459 3806 137 9 14 chr20 7768687 7769329 -58898676 + L1MA4A LINE L1 5650 6297 -6 24 0 0 0 chr20 7769329 7769353 -58898652 + AT_rich Low_complexity Low_complexity 1 24 0 2244 246 69 13 chr20 7769353 7769979 -58898026 - ERVL-B1 LTR ERVL -5102 662 2 876 260 69 86 chr20 7770016 7770423 -58897582 - MLT2B1 LTR ERVL -120 400 1 265 310 50 20 chr20 7770431 7770531 -58897474 - L2 LINE L2 -36 3236 3134 1193 297 60 10 chr20 7770674 7771058 -58896947 - LTR16C LTR ERVL 0 491 89 216 0 0 0 chr20 7771341 7771365 -58896640 + (T)n Simple_repeat Simple_repeat 1 24 0 222 385 21 0 chr20 7771611 7771707 -58896298 + L2 LINE L2 2868 2965 -349 279 0 0 0 chr20 7771753 7771784 -58896221 + (CA)n Simple_repeat Simple_repeat 2 32 0 242 162 54 0 chr20 7771823 7771897 -58896108 + (TA)n Simple_repeat Simple_repeat 2 79 0 1814 146 34 7 chr20 7772241 7772536 -58895469 + AluJb SINE Alu 1 303 -9 207 288 85 0 chr20 7774703 7774762 -58893243 - L2 LINE L2 -17 3255 3192 183 205 0 0 chr20 7776635 7776674 -58891331 + (TG)n Simple_repeat Simple_repeat 2 40 0 1065 266 46 30 chr20 7777114 7777418 -58890587 - LTR16C LTR ERVL -1 490 182 2205 234 58 26 chr20 7777823 7778467 -58889538 - L1MC4 LINE L1 -141 7901 7238 612 250 23 0 chr20 7778481 7778657 -58889348 - L1MC4 LINE L1 -960 7082 6903 183 374 147 10 chr20 7778711 7778909 -58889096 + L3b LINE CR1 1277 1501 -82 1800 189 9 18 chr20 7780835 7781178 -58886827 + MLT1A1 LTR MaLR 26 365 0 540 294 89 97 chr20 7781180 7781642 -58886363 - MLT1H LTR MaLR -84 465 8 221 73 0 24 chr20 7781829 7781870 -58886135 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 807 254 16 0 chr20 7782033 7782226 -58885779 + MIR SINE MIR 58 253 -9 315 266 61 48 chr20 7783054 7783296 -58884709 - MLT1L LTR MaLR -197 418 110 383 327 75 64 chr20 7784327 7784685 -58883320 - L1ME LINE L1 -379 5742 5381 288 237 88 0 chr20 7784725 7784839 -58883166 - HAL1b LINE L1 -17 1331 1208 232 225 0 0 chr20 7784842 7784882 -58883123 + polypyrimidine Low_complexity Low_complexity 5 44 0 648 287 68 54 chr20 7785459 7785901 -58882104 + LTR16A1 LTR ERVL 8 455 -2 3111 30 0 0 chr20 7786449 7786815 -58881190 - L1PA3 LINE L1 -3 6152 5787 23 33 0 0 chr20 7786957 7786987 -58881018 + AT_rich Low_complexity Low_complexity 1 30 0 568 289 115 31 chr20 7787032 7787292 -58880713 + LTR33 LTR ERVL 4 285 -236 242 109 87 0 chr20 7787315 7787361 -58880644 + MLT1H LTR MaLR 132 181 -368 205 226 19 0 chr20 7787724 7787777 -58880228 + (TA)n Simple_repeat Simple_repeat 2 55 0 651 162 0 0 chr20 7787799 7787898 -58880107 - FLAM_C SINE Alu -29 114 16 409 234 72 72 chr20 7787954 7788121 -58879884 - MER58C DNA MER1_type -5 210 44 225 0 0 0 chr20 7788206 7788231 -58879774 + (A)n Simple_repeat Simple_repeat 1 25 0 1031 248 11 29 chr20 7788295 7788569 -58879436 - L1M4 LINE L1 -5880 662 394 249 327 75 0 chr20 7788706 7788813 -58879192 + L2 LINE L2 2942 3056 -257 292 266 124 54 chr20 7788884 7789215 -58878790 - HAL1 LINE L1 0 2507 2154 33 25 0 0 chr20 7789251 7789291 -58878714 + AT_rich Low_complexity Low_complexity 1 40 0 192 77 0 0 chr20 7789394 7789420 -58878585 + (T)n Simple_repeat Simple_repeat 1 26 0 835 280 75 52 chr20 7789422 7789886 -58878119 - HAL1 LINE L1 -605 1902 1428 25 31 0 0 chr20 7789929 7789961 -58878044 + AT_rich Low_complexity Low_complexity 1 32 0 418 259 74 27 chr20 7790044 7790427 -58877578 + MLT1H LTR MaLR 1 509 -33 26 0 0 0 chr20 7791215 7791241 -58876764 + AT_rich Low_complexity Low_complexity 1 26 0 2050 112 6 37 chr20 7791388 7791711 -58876294 + AluSq SINE Alu 1 313 0 22 0 0 0 chr20 7793130 7793152 -58874853 + AT_rich Low_complexity Low_complexity 1 22 0 1791 173 134 11 chr20 7794515 7794896 -58873109 + MSTA LTR MaLR 1 428 0 183 42 0 0 chr20 7795065 7795089 -58872916 + (TTTTTA)n Simple_repeat Simple_repeat 1 24 0 5188 193 22 16 chr20 7795096 7796824 -58871181 - L1PA16 LINE L1 -10 6156 4413 405 0 0 0 chr20 7796824 7796869 -58871136 + (TG)n Simple_repeat Simple_repeat 2 46 0 5188 193 22 16 chr20 7796869 7797163 -58870842 - L1PA16 LINE L1 -1753 4413 4122 408 20 0 0 chr20 7797262 7797311 -58870694 + (CA)n Simple_repeat Simple_repeat 1 49 0 261 234 31 0 chr20 7797346 7797410 -58870595 + MIR SINE MIR 106 171 -91 7592 86 5 20 chr20 7797441 7798514 -58869491 - MER11C LTR ERVK -14 1057 1 211 365 19 10 chr20 7798514 7798618 -58869387 + MIR SINE MIR 158 262 0 476 348 85 49 chr20 7799119 7799757 -58868248 - L1M4 LINE L1 -753 5393 4733 421 241 80 29 chr20 7800020 7800157 -58867848 - MIR SINE MIR 0 262 119 1841 217 74 15 chr20 7802048 7802653 -58865352 - L1MD3 LINE L1 -9 7986 7204 1011 206 122 0 chr20 7803194 7803481 -58864524 + MER33 DNA MER1_type 2 323 -1 439 290 155 5 chr20 7803567 7803767 -58864238 + MIR SINE MIR 20 249 -13 231 61 0 0 chr20 7803928 7803961 -58864044 + (TTTA)n Simple_repeat Simple_repeat 3 35 0 1742 184 3 0 chr20 7803979 7804267 -58863738 - AluJo SINE Alu -23 289 1 330 331 103 36 chr20 7804393 7804888 -58863117 - L2 LINE L2 0 3313 2779 624 251 56 59 chr20 7805005 7805106 -58862899 - L2 LINE L2 -1171 2143 2043 1132 168 0 21 chr20 7805106 7805344 -58862661 + L1MA9 LINE L1 6075 6307 -5 624 251 56 59 chr20 7805344 7805529 -58862476 - L2 LINE L2 -1271 2043 1858 345 251 143 25 chr20 7806354 7806557 -58861448 - L1MC4 LINE L1 -1051 6991 6765 2120 90 28 3 chr20 7807164 7807453 -58860552 + AluSg SINE Alu 4 299 -11 1338 255 28 40 chr20 7808064 7808487 -58859518 + LTR52 LTR ERVL 1 418 -3 217 340 65 52 chr20 7809050 7809203 -58858802 - MIR3 SINE MIR -52 156 2 292 313 84 0 chr20 7810030 7810113 -58857892 + L2 LINE L2 3178 3267 -5 368 321 31 6 chr20 7810698 7810857 -58857148 + L3b LINE CR1 1279 1441 -142 624 256 6 32 chr20 7810955 7811111 -58856894 + MER5B DNA MER1_type 1 152 -26 4233 215 31 57 chr20 7811687 7811716 -58856289 - L1MD2 LINE L1 -10 6349 6321 1765 198 28 5 chr20 7811716 7812105 -58855900 - L1MB4 LINE L1 0 6180 5783 210 91 0 0 chr20 7812105 7812138 -58855867 + (TG)n Simple_repeat Simple_repeat 2 34 0 4233 215 31 57 chr20 7812138 7813428 -58854577 - L1MD2 LINE L1 -36 6323 5055 536 134 10 10 chr20 7813441 7813538 -58854467 + L1PB4 LINE L1 6057 6153 -3 31 0 0 0 chr20 7813538 7813569 -58854436 + AT_rich Low_complexity Low_complexity 1 31 0 283 201 24 120 chr20 7813576 7813741 -58854264 - L1MB4 LINE L1 -1098 5048 4891 3929 202 92 117 chr20 7813743 7815777 -58852228 + L1MCa LINE L1 20 2004 -4422 1048 246 11 8 chr20 7815861 7816125 -58851880 - MER93b LTR ERV1 0 373 109 761 69 62 0 chr20 7816134 7816264 -58851741 + (ATGTG)n Simple_repeat Simple_repeat 2 139 0 1469 213 0 7 chr20 7816266 7816553 -58851452 - AluJb SINE Alu -26 286 2 4801 252 57 15 chr20 7816568 7818573 -58849432 + L1MCa LINE L1 2153 4245 -2181 625 229 21 0 chr20 7818580 7818720 -58849285 + MLT2D LTR ERVL 1 143 -271 370 107 27 70 chr20 7818737 7818924 -58849081 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 * 468 77 89 18 chr20 7818890 7819058 -58848947 + (TA)n Simple_repeat Simple_repeat 1 180 0 23 0 0 0 chr20 7819063 7819086 -58848919 + AT_rich Low_complexity Low_complexity 1 23 0 1212 277 10 0 chr20 7819119 7819408 -58848597 - ERVL LTR ERVL -5061 703 412 207 114 0 0 chr20 7819408 7819443 -58848562 + (TA)n Simple_repeat Simple_repeat 1 35 0 280 205 24 12 chr20 7819515 7819598 -58848407 + (TA)n Simple_repeat Simple_repeat 2 85 0 22 0 0 0 chr20 7819732 7819754 -58848251 + AT_rich Low_complexity Low_complexity 1 22 0 2337 93 3 3 chr20 7821048 7821361 -58846644 - AluSq SINE Alu 0 313 1 1653 185 7 0 chr20 7821482 7821779 -58846226 - AluSx SINE Alu -13 299 1 235 44 44 22 chr20 7821975 7822020 -58845985 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 754 248 29 14 chr20 7822422 7822632 -58845373 - L1PB4 LINE L1 -3 6153 5941 264 100 0 0 chr20 7823118 7823158 -58844847 + (TG)n Simple_repeat Simple_repeat 2 41 0 470 288 70 84 chr20 7823158 7823703 -58844302 + HAL1 LINE L1 1153 1689 -818 506 322 56 31 chr20 7825465 7825785 -58842220 - L1ME LINE L1 -347 5815 5488 2415 155 23 28 chr20 7826172 7826604 -58841401 + Tigger2a DNA MER2_type 1 430 -4 28 61 0 0 chr20 7826685 7826734 -58841271 + AT_rich Low_complexity Low_complexity 1 49 0 466 358 66 9 chr20 7827441 7827667 -58840338 + MIR SINE MIR 2 240 -22 252 59 0 0 chr20 7827735 7827769 -58840236 + (CA)n Simple_repeat Simple_repeat 1 34 0 22 56 0 0 chr20 7827995 7828031 -58839974 + AT_rich Low_complexity Low_complexity 1 36 0 2506 51 0 3 chr20 7828717 7829028 -58838977 + AluY SINE Alu 1 310 -1 2321 94 0 7 chr20 7829041 7829349 -58838656 + AluSg SINE Alu 1 306 -4 228 184 0 0 chr20 7829580 7829629 -58838376 + (TA)n Simple_repeat Simple_repeat 2 50 0 7003 177 29 17 chr20 7829706 7832088 -58835917 - L1PB2 LINE L1 0 6151 3735 11145 146 12 5 chr20 7832442 7834233 -58833772 + Tigger1 DNA MER2_type 1 1805 -613 2071 187 37 55 chr20 7834251 7834710 -58833295 + MER34B LTR ERV1 12 462 -103 630 215 8 0 chr20 7834712 7834842 -58833163 + Ricksha_b DNA DNA 2 132 -1122 4670 178 29 51 chr20 7834842 7835868 -58832137 + Ricksha_b DNA DNA 239 1242 -12 32 67 0 0 chr20 7836648 7836708 -58831297 + AT_rich Low_complexity Low_complexity 1 60 0 21 0 0 0 chr20 7836950 7836971 -58831034 + AT_rich Low_complexity Low_complexity 1 21 0 205 339 24 24 chr20 7837375 7837499 -58830506 - L2 LINE L2 -1698 1616 1493 1418 251 42 11 chr20 7839217 7839599 -58828406 + MSTD LTR MaLR 3 396 0 5551 249 107 28 chr20 7839601 7841203 -58826802 + MSTD-int LTR MaLR 2 1730 -5 1628 173 72 45 chr20 7841208 7841583 -58826422 + MSTD LTR MaLR 1 385 -11 742 306 50 50 chr20 7842155 7842240 -58825765 + MLT1K LTR MaLR 188 272 -316 2499 160 19 2 chr20 7842240 7842665 -58825340 + MSTB1 LTR MaLR 1 432 0 742 306 50 50 chr20 7842665 7842978 -58825027 + MLT1K LTR MaLR 271 586 -2 555 200 7 59 chr20 7843626 7843761 -58824244 + LTR49 LTR ERV1 468 595 0 809 179 48 0 chr20 7843871 7844016 -58823989 - FRAM SINE Alu -17 159 8 240 111 0 0 chr20 7844737 7844773 -58823232 + (T)n Simple_repeat Simple_repeat 1 36 0 216 0 0 0 chr20 7844821 7844845 -58823160 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 198 328 56 72 chr20 7845772 7845967 -58822038 + L2 LINE L2 2828 3019 -253 191 330 60 20 chr20 7846138 7846238 -58821767 + L2 LINE L2 3137 3240 -32 2265 252 64 14 chr20 7846484 7847203 -58820802 + L1ME3A LINE L1 5408 6162 -8 2002 131 18 0 chr20 7847212 7847494 -58820511 + AluSg SINE Alu 1 287 -23 19168 176 40 9 chr20 7847644 7848467 -58819538 - L1MA2 LINE L1 0 7723 6927 2087 192 29 12 chr20 7848467 7848888 -58819117 - MSTA LTR MaLR 0 428 1 19168 176 40 9 chr20 7848888 7853481 -58814524 - L1MA2 LINE L1 -796 6927 1993 2284 79 31 0 chr20 7853481 7853772 -58814233 - AluY SINE Alu -11 300 1 19168 176 40 9 chr20 7853772 7855808 -58812197 - L1MA2 LINE L1 -5730 1993 22 237 325 125 0 chr20 7855911 7855991 -58812014 - MIR SINE MIR -152 110 21 528 312 98 27 chr20 7856292 7856587 -58811418 - MLT1I LTR MaLR -22 387 72 369 335 82 14 chr20 7856706 7856999 -58811006 - L1ME LINE L1 -350 5820 5508 35 41 0 0 chr20 7857135 7857184 -58810821 + AT_rich Low_complexity Low_complexity 1 49 0 403 285 27 20 chr20 7857522 7857766 -58810239 + LTR16C LTR ERVL 92 369 -122 37 76 0 0 chr20 7857909 7857988 -58810017 + AT_rich Low_complexity Low_complexity 1 79 0 1983 104 98 14 chr20 7858261 7858607 -58809398 + THE1C LTR MaLR 1 375 0 620 306 39 0 chr20 7859530 7859710 -58808295 - MER5A DNA MER1_type -2 187 1 964 274 150 21 chr20 7861239 7861723 -58806282 - MLT1G3 LTR MaLR -33 497 3 260 178 10 30 chr20 7862765 7862866 -58805139 + (TA)n Simple_repeat Simple_repeat 2 100 0 201 121 0 0 chr20 7863013 7863046 -58804959 + (TC)n Simple_repeat Simple_repeat 2 34 0 278 203 76 63 chr20 7863306 7863385 -58804620 - MER5A DNA MER1_type -1 188 109 470 275 154 7 chr20 7863412 7863561 -58804444 + MER5A DNA MER1_type 13 183 -6 2269 108 0 0 chr20 7863802 7864097 -58803908 - AluSg SINE Alu -15 295 1 2207 131 0 0 chr20 7864674 7864986 -58803019 + AluSx SINE Alu 1 312 0 376 250 0 46 chr20 7865465 7865573 -58802432 - MER5A DNA MER1_type -83 106 4 23 33 0 0 chr20 7865695 7865725 -58802280 + AT_rich Low_complexity Low_complexity 1 30 0 204 284 122 0 chr20 7865793 7865867 -58802138 + MIR SINE MIR 67 149 -59 671 258 98 12 chr20 7865919 7866163 -58801842 + Charlie4a DNA MER1_type 7 271 -237 721 220 0 0 chr20 7866173 7866346 -58801659 + L1 LINE L1 3844 4016 -2130 21 36 0 0 chr20 7866695 7866723 -58801282 + AT_rich Low_complexity Low_complexity 1 28 0 304 364 37 23 chr20 7867039 7867256 -58800749 + MIR SINE MIR 34 253 -9 207 206 111 48 chr20 7867592 7867655 -58800350 + MIR SINE MIR 113 179 -83 21 36 0 0 chr20 7868358 7868386 -58799619 + AT_rich Low_complexity Low_complexity 1 28 0 2097 120 74 34 chr20 7869154 7869504 -58798501 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr20 7869807 7869828 -58798177 + AT_rich Low_complexity Low_complexity 1 21 0 2274 157 29 11 chr20 7869916 7870291 -58797714 + LTR39 LTR ERV1 1 382 -401 1355 207 85 124 chr20 7870291 7871019 -58796986 + LTR8A LTR ERV1 1 700 -27 32 0 0 0 chr20 7871165 7871197 -58796808 + AT_rich Low_complexity Low_complexity 1 32 0 1828 230 35 10 chr20 7871323 7871719 -58796286 + LTR39 LTR ERV1 378 783 0 208 315 54 27 chr20 7872499 7872610 -58795395 - L2 LINE L2 -1 3312 3199 21 36 0 0 chr20 7872696 7872724 -58795281 + AT_rich Low_complexity Low_complexity 1 28 0 2421 84 0 0 chr20 7873279 7873590 -58794415 - AluY SINE Alu 0 311 1 216 395 30 15 chr20 7874232 7874364 -58793641 - MIR3 SINE MIR -63 145 12 368 183 0 0 chr20 7874364 7874424 -58793581 + MER5A DNA MER1_type 1 60 -129 1951 139 14 26 chr20 7874439 7874783 -58793222 + THE1C LTR MaLR 1 340 -35 1261 92 11 22 chr20 7874784 7874969 -58793036 - AluSg/x SINE Alu -13 299 117 696 172 0 0 chr20 7874998 7875114 -58792891 - FLAM_C SINE Alu -16 117 2 229 179 0 0 chr20 7875115 7875154 -58792851 + THE1C LTR MaLR 390 428 0 1633 224 172 5 chr20 7875160 7875585 -58792420 + MLT1D LTR MaLR 6 501 -4 247 268 0 0 chr20 7875605 7875661 -58792344 + MER5A DNA MER1_type 130 185 -4 197 273 109 55 chr20 7875878 7875988 -58792017 + MIR SINE MIR 34 149 -59 750 230 25 30 chr20 7876045 7876280 -58791725 + Charlie4a DNA MER1_type 38 271 -237 6236 198 18 16 chr20 7876289 7876577 -58791428 + L1PA16 LINE L1 3843 4129 -2037 1299 161 68 65 chr20 7876577 7876885 -58791120 + AluJb SINE Alu 3 311 0 6236 198 18 16 chr20 7876885 7878926 -58789079 + L1PA16 LINE L1 4129 6164 -2 337 224 46 101 chr20 7878928 7879165 -58788840 + Charlie4a DNA MER1_type 259 482 -26 181 241 46 81 chr20 7879252 7879339 -58788666 - MIR SINE MIR -123 139 56 1619 170 35 0 chr20 7879482 7879770 -58788235 + AluJb SINE Alu 1 298 -14 356 295 25 16 chr20 7880599 7880721 -58787284 + L3b LINE CR1 1111 1233 -350 310 277 11 11 chr20 7881416 7881510 -58786495 + MLT1I LTR MaLR 71 164 -245 234 288 106 24 chr20 7882228 7882398 -58785607 - LTR33 LTR ERVL 0 521 338 485 279 32 7 chr20 7882463 7882617 -58785388 - LTR33 LTR ERVL -360 161 4 288 0 0 0 chr20 7883275 7883307 -58784698 + (GA)n Simple_repeat Simple_repeat 1 32 0 1221 198 166 32 chr20 7883375 7883779 -58784226 + LTR48 LTR ERV1 330 787 0 260 328 37 42 chr20 7883919 7884108 -58783897 + Charlie8 DNA MER1_type 68 255 -2162 1381 220 91 23 chr20 7884952 7885424 -58782581 - Charlie4a DNA MER1_type 0 508 5 1763 133 11 7 chr20 7885837 7886115 -58781890 + AluSx SINE Alu 24 302 -10 194 192 19 19 chr20 7886503 7886555 -58781450 + MIR SINE MIR 211 262 0 374 351 61 14 chr20 7887730 7887878 -58780127 - MER5A DNA MER1_type -6 183 29 1331 143 28 4 chr20 7887944 7888351 -58779654 - LTR54 LTR ERV1 0 510 8 551 291 86 34 chr20 7888363 7888655 -58779350 - L1ME3A LINE L1 -37 6133 5827 2100 109 0 0 chr20 7889633 7889907 -58778098 - AluSg SINE Alu -16 294 21 332 318 101 34 chr20 7890060 7890327 -58777678 - L2 LINE L2 -92 3221 2937 221 333 175 0 chr20 7890331 7890514 -58777491 - MIR SINE MIR -25 237 23 2122 129 0 3 chr20 7890523 7890833 -58777172 - AluSc SINE Alu 0 309 1 2233 105 7 0 chr20 7891097 7891401 -58776604 + AluY SINE Alu 1 306 -5 2857 122 5 97 chr20 7891889 7892345 -58775660 + L1PA16 LINE L1 5650 6045 -121 1863 180 71 20 chr20 7892345 7892751 -58775254 - MSTA LTR MaLR 0 428 2 2857 122 5 97 chr20 7892751 7892862 -58775143 + L1PA16 LINE L1 6045 6165 -1 22 0 0 0 chr20 7893237 7893259 -58774746 + AT_rich Low_complexity Low_complexity 1 22 0 30 45 0 0 chr20 7894233 7894277 -58773728 + AT_rich Low_complexity Low_complexity 1 44 0 436 199 81 7 chr20 7895092 7895228 -58772777 + L1MA7 LINE L1 6146 6291 0 372 335 137 57 chr20 7895507 7895946 -58772059 - L2 LINE L2 -11 3302 2829 225 200 82 64 chr20 7896454 7896564 -58771441 - L2 LINE L2 -1046 2268 2157 295 352 59 43 chr20 7896771 7897075 -58770930 + L2 LINE L2 2250 2558 -756 597 270 6 12 chr20 7897189 7897352 -58770653 - MER58B DNA MER1_type -2 339 178 506 308 158 12 chr20 7898733 7899132 -58768873 + LTR16A1 LTR ERVL 1 457 0 200 200 0 0 chr20 7899357 7899392 -58768613 + (CA)n Simple_repeat Simple_repeat 1 35 0 21 0 0 0 chr20 7899449 7899470 -58768535 + AT_rich Low_complexity Low_complexity 1 21 0 725 223 80 11 chr20 7901583 7901758 -58766247 + L1MB4 LINE L1 5845 6031 -149 2582 218 49 5 chr20 7901994 7902605 -58765400 - L1MB4 LINE L1 -4 6176 5539 1741 243 19 2 chr20 7902636 7903101 -58764904 - L1MB4 LINE L1 -765 5381 4909 338 342 43 27 chr20 7905123 7905307 -58762698 - MIR3 SINE MIR -4 204 18 276 257 62 9 chr20 7907101 7907214 -58760791 - LTR33 LTR ERVL -57 464 346 428 371 10 10 chr20 7907264 7907469 -58760536 - LTR33 LTR ERVL -257 264 60 291 274 71 0 chr20 7907561 7907645 -58760360 + L1ME3A LINE L1 17 106 -6434 451 96 58 0 chr20 7907652 7907756 -58760249 + (TAGA)n Simple_repeat Simple_repeat 4 113 0 2247 272 58 58 chr20 7907756 7908801 -58759204 + L1ME3A LINE L1 105 1040 -5500 557 228 22 10 chr20 7908798 7908947 -58759058 - L1MDa LINE L1 -4604 1778 1521 * 1321 174 66 7 chr20 7908947 7909234 -58758771 - Ricksha DNA DNA -17 2837 2534 3588 149 58 35 chr20 7909240 7910020 -58757985 - Ricksha DNA DNA -384 2867 1973 2675 26 0 0 chr20 7910020 7910331 -58757674 - AluYa5 SINE Alu 0 311 1 3588 149 58 35 chr20 7910331 7910630 -58757375 - Ricksha DNA DNA -1278 1973 1682 5154 280 33 29 chr20 7911477 7911721 -58756284 + L1P LINE L1 1487 1728 -4418 2398 86 0 0 chr20 7911721 7912023 -58755982 + AluSx SINE Alu 1 302 -10 5154 280 33 29 chr20 7912023 7913849 -58754156 + L1P LINE L1 1728 3566 -2580 1283 235 0 0 chr20 7916113 7916347 -58751658 + Tigger7 DNA MER2_type 3 236 -497 1078 217 9 4 chr20 7916353 7916583 -58751422 - MER46A DNA MER2_type -1 235 5 403 195 24 0 chr20 7916585 7916667 -58751338 + Tigger7 DNA MER2_type 2407 2490 -1 325 294 105 14 chr20 7916729 7916872 -58751133 - L1MDa LINE L1 -5398 1165 1010 3256 282 92 30 chr20 7917026 7919379 -58748626 + L1ME3A LINE L1 3204 5762 -794 2110 147 26 26 chr20 7919379 7919768 -58748237 + L1PB1 LINE L1 5750 6138 -13 3256 282 92 30 chr20 7919768 7920207 -58747798 + L1ME3A LINE L1 5762 6172 -384 527 254 113 60 chr20 7920208 7920491 -58747514 + L1ME3A LINE L1 6241 6538 -26 31 92 0 0 chr20 7920613 7920700 -58747305 + AT_rich Low_complexity Low_complexity 1 87 0 1524 197 0 16 chr20 7920704 7921009 -58746996 + AluJo SINE Alu 1 300 -12 484 296 49 128 chr20 7921225 7921501 -58746504 - L2 LINE L2 -452 2862 2566 338 182 39 0 chr20 7921501 7921578 -58746427 + L1MB3 LINE L1 6091 6170 -13 484 296 49 128 chr20 7921578 7921949 -58746056 - L2 LINE L2 -748 2566 2266 437 297 121 25 chr20 7921965 7922204 -58745801 - MIR SINE MIR 0 262 1 1785 166 0 10 chr20 7922677 7922979 -58745026 + AluJb SINE Alu 1 299 -13 13784 191 31 18 chr20 7923337 7925959 -58742046 + L1MA3 LINE L1 16 2602 -5122 2215 118 0 0 chr20 7925959 7926264 -58741741 + AluSx SINE Alu 1 305 -7 13784 191 31 18 chr20 7926264 7928952 -58739053 + L1MA3 LINE L1 2602 5786 -1938 503 123 0 12 chr20 7928952 7929033 -58738972 - MADE1 DNA Mariner 0 80 1 13784 191 31 18 chr20 7929033 7930997 -58737008 + L1MA3 LINE L1 5786 7723 -1 739 342 70 23 chr20 7931298 7931696 -58736309 - LTR16C LTR ERVL -4 487 71 1960 239 105 2 chr20 7932447 7932932 -58735073 - MER21B LTR ERV1 -113 750 216 1265 226 30 15 chr20 7932937 7933207 -58734798 + MSTD LTR MaLR 123 396 0 875 207 57 0 chr20 7933207 7933400 -58734605 - L1 LINE L1 -900 5246 5043 * 3901 178 20 24 chr20 7933399 7934179 -58733826 + L1MB1 LINE L1 5392 6168 0 246 329 49 0 chr20 7935163 7935245 -58732760 + L2 LINE L2 2413 2498 -816 346 241 0 0 chr20 7935521 7935600 -58732405 - L1ME4a LINE L1 -296 5825 5747 858 230 158 34 chr20 7935932 7936254 -58731751 - MLT1A1 LTR MaLR 0 365 4 3137 187 20 6 chr20 7936491 7937127 -58730878 - L1MC1 LINE L1 0 6333 5689 248 241 89 0 chr20 7937127 7937206 -58730799 - L1 LINE L1 -1846 4300 4215 291 165 41 10 chr20 7937211 7937308 -58730697 - L1 LINE L1 -2974 3172 3073 810 153 20 33 chr20 7937323 7937473 -58730532 - L1MC1 LINE L1 -769 5564 5417 * 6447 162 13 9 chr20 7937470 7937828 -58730177 - L1PB1 LINE L1 -3 6148 5793 192 77 0 0 chr20 7937828 7937854 -58730151 + (TA)n Simple_repeat Simple_repeat 1 26 0 6447 162 13 9 chr20 7937854 7939655 -58728350 - L1PB1 LINE L1 -358 5793 3977 364 181 13 110 chr20 7939654 7939809 -58728196 - L1 LINE L1 -3219 2927 2788 * 21 0 0 0 chr20 7940732 7940753 -58727252 + AT_rich Low_complexity Low_complexity 1 21 0 1069 249 20 23 chr20 7940778 7941131 -58726874 + L1 LINE L1 4359 4710 -1436 27 0 0 0 chr20 7941147 7941174 -58726831 + AT_rich Low_complexity Low_complexity 1 27 0 3995 182 59 39 chr20 7941174 7941425 -58726580 - L1MA4A LINE L1 -24 6981 6736 204 40 0 0 chr20 7941425 7941450 -58726555 + (TG)n Simple_repeat Simple_repeat 2 26 0 3995 182 59 39 chr20 7941450 7942926 -58725079 - L1MA4A LINE L1 -269 6736 5159 6242 215 20 9 chr20 7942926 7944440 -58723565 - L1MA4A LINE L1 -2002 4846 3315 4368 194 25 68 chr20 7944439 7945248 -58722757 - L1MA4A LINE L1 -4309 2540 1795 * 723 197 92 0 chr20 7945248 7945390 -58722615 - FRAM SINE Alu -10 156 2 4368 194 25 68 chr20 7945390 7945758 -58722247 - L1MA4A LINE L1 -5054 1795 1413 971 265 63 40 chr20 7945761 7945852 -58722153 - L1M4 LINE L1 -2332 3814 3727 2281 97 0 0 chr20 7945852 7946152 -58721853 + AluY SINE Alu 2 301 -10 971 265 63 40 chr20 7946152 7946180 -58721825 - L1M4 LINE L1 -2419 3727 3701 297 0 0 0 chr20 7946180 7946213 -58721792 + (TG)n Simple_repeat Simple_repeat 2 34 0 971 265 63 40 chr20 7946213 7946488 -58721517 - L1M4 LINE L1 -2445 3701 3410 1112 129 7 0 chr20 7946488 7946681 -58721324 - AluSg SINE Alu 0 320 127 507 222 0 0 chr20 7946684 7946801 -58721204 + (CATATA)n Simple_repeat Simple_repeat 5 121 0 1002 81 0 0 chr20 7946806 7946929 -58721076 - AluSg SINE Alu -187 123 1 2520 226 40 12 chr20 7946934 7947232 -58720773 - L1M4 LINE L1 -2727 3419 3131 2732 10 3 0 chr20 7947232 7947534 -58720471 - AluYa5 SINE Alu -8 303 1 2520 226 40 12 chr20 7947534 7947995 -58720010 - L1M4 LINE L1 -3015 3131 2639 1632 199 58 17 chr20 7948379 7948726 -58719279 + LTR22 LTR ERVK 1 361 -148 301 327 51 56 chr20 7948778 7948992 -58719013 - L2 LINE L2 -542 2772 2560 909 283 109 38 chr20 7949039 7949587 -58718418 + MLT1G1 LTR MaLR 1 587 -8 461 284 13 79 chr20 7950392 7950621 -58717384 + L2 LINE L2 3100 3313 0 286 324 36 18 chr20 7951331 7951442 -58716563 - L2 LINE L2 -17 3255 3143 259 321 138 36 chr20 7951429 7951734 -58716271 - L2 LINE L2 -702 2612 2277 * 249 295 0 41 chr20 7951839 7951961 -58716044 + GA-rich Low_complexity Low_complexity 4 120 0 219 139 0 0 chr20 7952178 7952214 -58715791 + (TG)n Simple_repeat Simple_repeat 2 37 0 345 301 35 21 chr20 7952256 7952399 -58715606 - L2 LINE L2 -1884 1430 1286 295 260 53 40 chr20 7952729 7952879 -58715126 + L1ME4a LINE L1 5782 5933 -188 1328 241 36 42 chr20 7952894 7953176 -58714829 + L1ME4a LINE L1 5493 5772 -398 2531 53 0 3 chr20 7953176 7953479 -58714526 - AluY SINE Alu -9 302 1 1328 241 36 42 chr20 7953479 7953644 -58714361 + L1ME4a LINE L1 5772 5937 -233 617 86 21 0 chr20 7953646 7953739 -58714266 + L1PB2 LINE L1 6049 6143 -8 280 247 80 7 chr20 7953882 7954032 -58713973 + L1ME4a LINE L1 5961 6121 0 28 29 0 0 chr20 7954210 7954245 -58713760 + AT_rich Low_complexity Low_complexity 1 35 0 185 386 85 7 chr20 7955954 7956107 -58711898 - MIR SINE MIR -93 169 5 1088 286 59 53 chr20 7956151 7956678 -58711327 + MLT1H1 LTR MaLR 11 540 -15 197 264 33 77 chr20 7956795 7956886 -58711119 + MIR SINE MIR 5 91 -171 216 143 43 0 chr20 7956923 7956993 -58711012 + (TA)n Simple_repeat Simple_repeat 2 74 0 1514 264 8 60 chr20 7957015 7957518 -58710487 - MLT2B1 LTR ERVL -42 478 2 928 218 76 17 chr20 7957521 7957810 -58710195 - L1MA9 LINE L1 -2436 3710 3405 * 6472 200 29 13 chr20 7957804 7959311 -58708694 + L1MA9 LINE L1 3697 5228 -918 592 116 18 0 chr20 7959319 7959431 -58708574 + L1MA9 LINE L1 5335 5448 -852 3235 153 13 10 chr20 7959431 7960025 -58707980 + L1MA4A LINE L1 5703 6299 -4 4403 138 40 51 chr20 7960044 7960748 -58707257 + L1MA9 LINE L1 5476 6171 -141 1936 189 72 12 chr20 7960748 7961150 -58706855 + MSTB LTR MaLR 1 426 0 4403 138 40 51 chr20 7961150 7961291 -58706714 + L1MA9 LINE L1 6171 6312 0 11039 183 24 27 chr20 7961292 7963452 -58704553 - ERVL-B1 LTR ERVL -3 5761 3610 * 11060 200 13 10 chr20 7963447 7965489 -58702516 - ERVL-B1 LTR ERVL -2482 3282 1235 2884 230 104 82 chr20 7965506 7966597 -58701408 - ERVL-B1 LTR ERVL -4648 1116 2 264 77 0 0 chr20 7966678 7966717 -58701288 + (TA)n Simple_repeat Simple_repeat 2 40 0 1233 253 17 111 chr20 7966723 7967289 -58700716 - MLT2B3 LTR ERVL -46 491 3 276 324 29 0 chr20 7967291 7967396 -58700609 + MIR SINE MIR 154 261 -1 297 261 84 8 chr20 7968027 7968146 -58699859 - L1ME3A LINE L1 -1 6169 6042 698 190 229 0 chr20 7968236 7968415 -58699590 + MIR SINE MIR 32 251 -11 25 0 0 0 chr20 7970326 7970351 -58697654 + AT_rich Low_complexity Low_complexity 1 25 0 205 200 43 0 chr20 7970373 7970443 -58697562 + (TATATG)n Simple_repeat Simple_repeat 5 77 0 1851 145 0 41 chr20 7970980 7971297 -58696708 - AluJo SINE Alu 0 312 9 438 292 139 39 chr20 7972161 7972442 -58695563 - L2 LINE L2 0 3313 3005 261 309 56 24 chr20 7972919 7973045 -58694960 + MER5A DNA MER1_type 10 139 -50 * 330 341 113 24 chr20 7973017 7973324 -58694681 - L2 LINE L2 -219 3053 2726 22 35 0 0 chr20 7973793 7973822 -58694183 + AT_rich Low_complexity Low_complexity 1 29 0 657 218 41 86 chr20 7974103 7974300 -58693705 + MER20 DNA MER1_type 31 218 -1 246 320 118 62 chr20 7974541 7974719 -58693286 + MIR3 SINE MIR 16 203 -5 306 350 17 8 chr20 7974721 7974841 -58693164 + MLT2E LTR ERVL 1 121 -507 245 304 185 22 chr20 7974862 7975046 -58692959 + MLT2F LTR ERVL 223 436 -227 284 207 0 85 chr20 7975213 7975250 -58692755 + MLT2E LTR ERVL 533 561 -67 2234 160 85 5 chr20 7975250 7975674 -58692331 + LTR22A LTR ERVK 1 458 0 284 207 0 85 chr20 7975674 7975718 -58692287 + MLT2E LTR ERVL 561 607 -21 2022 149 0 0 chr20 7975838 7976133 -58691872 + AluSg SINE Alu 1 295 -15 231 265 15 0 chr20 7976486 7976554 -58691451 - MER103 DNA DNA -91 75 7 315 348 0 0 chr20 7976965 7977054 -58690951 - MIR SINE MIR -148 114 26 21 0 0 0 chr20 7977787 7977808 -58690197 + AT_rich Low_complexity Low_complexity 1 21 0 7271 42 3 10 chr20 7977808 7978864 -58689141 - L1PA4 LINE L1 -3 6152 5097 1681 189 0 16 chr20 7979465 7979771 -58688234 - AluJo SINE Alu -9 303 3 12119 184 54 24 chr20 7979948 7981629 -58686376 + L1M1 LINE L1 13 1641 -5924 315 0 0 0 chr20 7981629 7981664 -58686341 + (GA)n Simple_repeat Simple_repeat 2 36 0 12119 184 54 24 chr20 7981664 7982015 -58685990 + L1M1 LINE L1 1641 1980 -5585 640 13 0 0 chr20 7982015 7982094 -58685911 + L1PA2 LINE L1 6073 6151 -4 12119 184 54 24 chr20 7982094 7982212 -58685793 + L1M1 LINE L1 1980 2093 -5472 2127 113 10 0 chr20 7982212 7982505 -58685500 + AluSc SINE Alu 1 296 -13 12119 184 54 24 chr20 7982505 7982798 -58685207 + L1M1 LINE L1 2093 2533 -5032 2877 142 6 18 chr20 7982792 7983307 -58684698 + L1M1 LINE L1 2887 3395 -4170 * 16253 168 24 23 chr20 7983361 7984611 -58683394 + L1MA2 LINE L1 663 1910 -5813 1679 150 177 11 chr20 7984611 7984978 -58683027 + MSTA LTR MaLR 1 428 0 16253 168 24 23 chr20 7984978 7990782 -58677223 + L1MA2 LINE L1 1910 7719 -4 23 33 0 0 chr20 7990791 7990821 -58677184 + AT_rich Low_complexity Low_complexity 1 30 0 280 303 92 54 chr20 7990851 7991036 -58676969 - MLT1K LTR MaLR -172 416 225 185 257 29 71 chr20 7992201 7992271 -58675734 + L2 LINE L2 3184 3250 -63 297 274 153 0 chr20 7992360 7992484 -58675521 + MIR SINE MIR 70 212 -50 27 92 0 0 chr20 7993029 7993105 -58674900 + AT_rich Low_complexity Low_complexity 1 76 0 2545 255 88 17 chr20 7993301 7994391 -58673614 - L1MD2 LINE L1 -70 6289 5128 310 247 66 44 chr20 7994770 7994971 -58673034 - L1MD2 LINE L1 -2969 3177 2969 324 0 0 0 chr20 7994971 7995007 -58672998 + (TG)n Simple_repeat Simple_repeat 2 37 0 310 247 66 44 chr20 7995007 7995032 -58672973 - L1MD2 LINE L1 -3177 2969 2946 * 784 221 44 15 chr20 7995010 7995214 -58672791 - L1MC2 LINE L1 -8 6336 6127 941 206 31 51 chr20 7995392 7995681 -58672324 - LTR56 LTR ERV1 -1 436 179 1398 244 74 30 chr20 7995681 7996279 -58671726 + L1MC3 LINE L1 831 1454 -4972 7378 225 58 54 chr20 7996326 7999655 -58668350 + L1MC3 LINE L1 2032 5347 -2718 2030 162 0 0 chr20 7999655 7999963 -58668042 - AluSx SINE Alu -4 308 1 7378 225 58 54 chr20 7999963 8001751 -58666254 + L1MC3 LINE L1 5347 7445 -620 249 324 0 0 chr20 8001751 8001819 -58666186 + MLT1J2 LTR MaLR 35 102 -465 7378 225 58 54 chr20 8001819 8002421 -58665584 + L1MC3 LINE L1 7445 8043 -22 2774 12 3 0 chr20 8002424 8002745 -58665260 - L1PA3 LINE L1 0 6155 5834 41 87 0 0 chr20 8002769 8002873 -58665132 + AT_rich Low_complexity Low_complexity 1 104 0 476 29 159 0 chr20 8003028 8003097 -58664908 + MADE1 DNA Mariner 1 80 0 316 316 51 59 chr20 8003319 8003556 -58664449 - MIR SINE MIR -25 237 3 905 64 0 0 chr20 8003981 8004091 -58663914 + AluY SINE Alu 197 306 -5 8114 148 44 82 chr20 8004638 8006400 -58661605 - pTR5 LTR ERV1 -1 2437 743 269 246 0 25 chr20 8006592 8006691 -58661314 - L1ME LINE L1 -515 5606 5516 339 293 79 7 chr20 8006691 8006831 -58661174 + MLT1J2 LTR MaLR 1 150 -300 312 325 183 6 chr20 8006877 8007046 -58660959 + MLT1J2 LTR MaLR 207 405 -45 330 262 54 54 chr20 8007099 8007609 -58660396 - L1M2 LINE L1 -684 5486 5008 21 36 0 0 chr20 8007642 8007670 -58660335 + AT_rich Low_complexity Low_complexity 1 28 0 419 269 82 82 chr20 8007722 8008112 -58659893 - L1ME LINE L1 -1301 4845 4456 824 148 0 0 chr20 8008806 8008928 -58659077 + FRAM SINE Alu 20 141 -35 1501 232 197 7 chr20 8009150 8009694 -58658311 + MER76 LTR ERV 1 647 -41 869 256 60 75 chr20 8010513 8010553 -58657452 - LTR16A1 LTR ERVL 0 457 418 198 0 0 0 chr20 8010553 8010575 -58657430 + (TG)n Simple_repeat Simple_repeat 1 22 0 869 256 60 75 chr20 8010575 8010998 -58657007 - LTR16A1 LTR ERVL -39 418 1 492 304 173 0 chr20 8012489 8012709 -58655296 + MIR SINE MIR 5 262 0 468 127 13 0 chr20 8013179 8013258 -58654747 - MADE1 DNA Mariner 0 80 1 525 229 43 55 chr20 8013366 8013619 -58654386 + LTR37B LTR ERV1 197 446 -22 403 88 15 0 chr20 8013620 8013688 -58654317 - L1MD2 LINE L1 -3 6356 6288 1356 87 0 16 chr20 8013688 8013872 -58654133 + AluSq SINE Alu 133 313 0 1980 132 24 3 chr20 8013905 8014263 -58653742 + AluSx SINE Alu 1 364 0 4441 235 73 43 chr20 8014267 8015664 -58652341 - L1MD1 LINE L1 -53 6583 5228 1831 156 11 0 chr20 8015664 8015981 -58652024 - AluJb SINE Alu 0 320 1 4441 235 73 43 chr20 8015981 8016945 -58651060 - L1MD1 LINE L1 -1408 5228 4130 1569 209 40 0 chr20 8016945 8017247 -58650758 - 7SLRNA srpRNA srpRNA -3 317 4 4441 235 73 43 chr20 8017247 8017971 -58650034 - L1MD1 LINE L1 -2506 4130 3429 963 229 84 57 chr20 8017966 8018252 -58649753 - L1MD1 LINE L1 -3895 2645 2368 * 1706 161 23 10 chr20 8018252 8018551 -58649454 - AluSx SINE Alu -7 305 3 1597 174 0 7 chr20 8018553 8018823 -58649182 - AluJb SINE Alu -21 291 24 963 229 84 57 chr20 8018823 8019081 -58648924 - L1MD1 LINE L1 -4172 2368 2207 319 268 162 0 chr20 8019124 8019266 -58648739 + MIR SINE MIR 95 259 -3 666 293 147 39 chr20 8019831 8020220 -58647785 - LTR16A1 LTR ERVL 0 457 27 3302 124 9 50 chr20 8021282 8021900 -58646105 + MER4B LTR ERV1 1 770 -9 21 0 0 0 chr20 8024222 8024243 -58643762 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 8024285 8024306 -58643699 + AT_rich Low_complexity Low_complexity 1 21 0 2882 16 0 0 chr20 8024646 8024962 -58643043 - AluYb8 SINE Alu -2 316 1 464 320 144 36 chr20 8025238 8025465 -58642540 - L1M4 LINE L1 -2734 3412 3211 225 0 0 0 chr20 8025465 8025490 -58642515 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 464 320 144 36 chr20 8025490 8025599 -58642406 - L1M4 LINE L1 -2935 3211 3115 1786 141 19 0 chr20 8025599 8025862 -58642143 - AluSx SINE Alu -14 298 31 464 320 144 36 chr20 8025862 8026386 -58641619 - L1M4 LINE L1 -3031 3115 2458 262 143 61 0 chr20 8027285 8027334 -58640671 + MADE1 DNA Mariner 1 52 -28 364 231 90 60 chr20 8027611 8027745 -58640260 - L2 LINE L2 0 3313 3176 337 250 0 0 chr20 8027796 8027864 -58640141 + L2 LINE L2 3241 3308 -5 825 218 55 56 chr20 8028970 8029353 -58638652 - MLT1C LTR MaLR -4 463 1 200 287 18 6 chr20 8029769 8029933 -58638072 + (TTAGGG)n Simple_repeat Simple_repeat 4 169 0 227 200 109 0 chr20 8030069 8030124 -58637881 + MIR SINE MIR 84 144 -64 4007 190 140 15 chr20 8030130 8031555 -58636450 - MER52A LTR ERV1 0 1755 1 22 0 0 0 chr20 8031738 8031760 -58636245 + AT_rich Low_complexity Low_complexity 1 22 0 2522 158 12 5 chr20 8032305 8032729 -58635276 + MSTA LTR MaLR 2 428 0 240 167 0 0 chr20 8034902 8034950 -58633055 + GA-rich Low_complexity Low_complexity 2 49 0 25 0 0 0 chr20 8035023 8035048 -58632957 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr20 8036586 8036607 -58631398 + AT_rich Low_complexity Low_complexity 1 21 0 504 266 158 13 chr20 8039850 8040008 -58627997 - MER5A DNA MER1_type 0 189 9 265 177 51 0 chr20 8041366 8041445 -58626560 + (CCCTAG)n Simple_repeat Simple_repeat 1 83 0 237 235 73 29 chr20 8042412 8042480 -58625525 + MIR SINE MIR 184 254 -8 265 183 0 37 chr20 8042836 8042918 -58625087 + GA-rich Low_complexity Low_complexity 3 81 0 186 43 0 0 chr20 8043744 8043767 -58624238 + (ATG)n Simple_repeat Simple_repeat 1 23 0 263 331 63 8 chr20 8043771 8043898 -58624107 - MIR SINE MIR -10 252 119 24 53 0 0 chr20 8044323 8044361 -58623644 + AT_rich Low_complexity Low_complexity 1 38 0 298 247 14 0 chr20 8044387 8044460 -58623545 - MIR SINE MIR -148 114 41 205 152 0 0 chr20 8044583 8044616 -58623389 + CT-rich Low_complexity Low_complexity 2 34 0 306 0 0 0 chr20 8044617 8044651 -58623354 + (CA)n Simple_repeat Simple_repeat 2 35 0 23 33 0 0 chr20 8044826 8044856 -58623149 + AT_rich Low_complexity Low_complexity 1 30 0 183 360 105 0 chr20 8045169 8045283 -58622722 + L2 LINE L2 3137 3262 -10 7223 25 5 0 chr20 8045935 8046816 -58621189 + L1PA3 LINE L1 5301 6185 0 2345 59 0 50 chr20 8047625 8047948 -58620057 - AluY SINE Alu -4 307 1 375 271 79 62 chr20 8047963 8048140 -58619865 + MER102a DNA MER1_type 148 327 -3 207 0 0 0 chr20 8049460 8049483 -58618522 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 242 290 176 11 chr20 8049640 8049816 -58618189 + L2 LINE L2 2968 3172 -141 1160 146 0 0 chr20 8049819 8049997 -58618008 - AluSg/x SINE Alu -9 303 126 1862 128 10 20 chr20 8049998 8050159 -58617846 - AluSx SINE Alu -17 295 137 1877 117 47 3 chr20 8050159 8050457 -58617548 - AluSx SINE Alu -1 311 1 1862 128 10 20 chr20 8050457 8050593 -58617412 - AluSx SINE Alu -175 137 1 478 271 19 32 chr20 8050593 8050748 -58617257 + L2 LINE L2 3161 3313 0 191 291 0 18 chr20 8050819 8050874 -58617131 + L2 LINE L2 3258 3311 -2 22 35 0 0 chr20 8051535 8051564 -58616441 + AT_rich Low_complexity Low_complexity 1 29 0 323 262 158 79 chr20 8052367 8052531 -58615474 + MER5A DNA MER1_type 6 182 -7 726 257 101 68 chr20 8052922 8053455 -58614550 - MLT1H1 LTR MaLR -4 551 1 1970 54 0 0 chr20 8053478 8053737 -58614268 - L1P LINE L1 -4620 1526 1268 257 290 97 41 chr20 8053966 8054111 -58613894 + LTR33 LTR ERVL 1 153 -368 21 36 0 0 chr20 8054343 8054371 -58613634 + AT_rich Low_complexity Low_complexity 1 28 0 443 311 72 27 chr20 8055117 8055339 -58612666 + MIR SINE MIR 29 260 -2 254 281 61 0 chr20 8055370 8055452 -58612553 + L1ME LINE L1 5738 5824 -297 1409 137 194 0 chr20 8055583 8055831 -58612174 - AluSx SINE Alu -16 296 1 297 342 37 71 chr20 8056036 8056390 -58611615 + MLT1J2 LTR MaLR 104 445 -5 39 22 0 0 chr20 8056620 8056666 -58611339 + AT_rich Low_complexity Low_complexity 1 46 0 22 0 0 0 chr20 8057152 8057174 -58610831 + AT_rich Low_complexity Low_complexity 1 22 0 958 358 13 22 chr20 8058074 8058844 -58609161 + L1MEc LINE L1 196 958 -5605 354 262 84 63 chr20 8058870 8059061 -58608944 + L1MEc LINE L1 785 979 -5405 428 275 46 38 chr20 8059123 8059385 -58608620 + L1MEc LINE L1 1158 1421 -5142 2083 234 75 0 chr20 8059385 8059850 -58608155 - MLT1D LTR MaLR 0 505 6 1364 266 68 70 chr20 8059854 8059923 -58608082 + L1MEc LINE L1 1265 1333 -5049 1466 191 10 27 chr20 8059923 8060221 -58607784 - AluJo SINE Alu -19 293 1 1364 266 68 70 chr20 8060221 8060760 -58607245 + L1MEc LINE L1 1333 1872 -4510 180 0 0 0 chr20 8060760 8060780 -58607225 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1364 266 68 70 chr20 8060780 8060832 -58607173 + L1MEc LINE L1 1872 1923 -4459 964 251 18 0 chr20 8060832 8061051 -58606954 + MER58A DNA MER1_type 1 223 -1 1364 266 68 70 chr20 8061051 8061471 -58606534 + L1MEc LINE L1 1923 2342 -4040 1899 65 8 0 chr20 8061471 8061717 -58606288 + L1PA5 LINE L1 5904 6151 -3 1364 266 68 70 chr20 8061717 8062269 -58605736 + L1MEc LINE L1 2342 3027 -3355 22 0 0 0 chr20 8062424 8062446 -58605559 + AT_rich Low_complexity Low_complexity 1 22 0 234 0 0 0 chr20 8062501 8062527 -58605478 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 261 0 0 0 chr20 8062810 8062839 -58605166 + (TG)n Simple_repeat Simple_repeat 2 30 0 195 100 0 0 chr20 8062990 8063020 -58604985 + (CATA)n Simple_repeat Simple_repeat 3 32 0 1930 150 3 28 chr20 8063440 8063760 -58604245 - AluJo SINE Alu 0 312 1 781 255 85 5 chr20 8063846 8064046 -58603959 + MIR SINE MIR 42 257 -5 29 94 0 0 chr20 8065318 8065403 -58602602 + AT_rich Low_complexity Low_complexity 1 85 0 3557 162 12 65 chr20 8066068 8066797 -58601208 + LTR8 LTR ERV1 1 691 0 26 64 0 0 chr20 8068019 8068066 -58599939 + AT_rich Low_complexity Low_complexity 1 47 0 270 382 18 0 chr20 8069443 8069553 -58598452 - MIR3 SINE MIR -52 156 45 319 284 104 22 chr20 8069700 8069834 -58598171 + MSTD LTR MaLR 4 148 -217 2145 168 0 0 chr20 8069899 8070256 -58597749 - L1PB4 LINE L1 -17 6139 5783 330 161 16 0 chr20 8070261 8070323 -58597682 + L1MC4 LINE L1 6641 6703 -1339 3892 154 18 7 chr20 8070331 8071527 -58596478 - L1PB4 LINE L1 -374 5782 4572 993 180 35 0 chr20 8071530 8071702 -58596303 + MSTD LTR MaLR 219 396 0 5854 234 124 26 chr20 8071703 8073282 -58594723 + MSTD-int LTR MaLR 2 1735 0 1014 166 105 33 chr20 8073282 8073603 -58594402 + MSTD LTR MaLR 1 396 0 2633 156 12 0 chr20 8073757 8074180 -58593825 + MSTA LTR MaLR 1 428 0 226 26 79 0 chr20 8074986 8075024 -58592981 + A-rich Low_complexity Low_complexity 4 44 0 385 337 120 4 chr20 8075044 8075113 -58592892 - LTR33A LTR ERVL -94 429 369 3568 122 12 81 chr20 8075113 8075795 -58592210 + MER41B LTR ERV1 1 635 0 385 337 120 4 chr20 8075795 8075992 -58592013 - LTR33A LTR ERVL -154 369 132 764 297 115 60 chr20 8076064 8076613 -58591392 - MLT1G LTR MaLR -2 588 10 376 169 0 0 chr20 8080311 8080376 -58587629 - MER81 DNA DNA -48 66 2 182 218 0 18 chr20 8080482 8080537 -58587468 + CT-rich Low_complexity Low_complexity 2 55 0 309 320 63 26 chr20 8080834 8080995 -58587010 - MIR SINE MIR -56 206 40 1300 183 23 115 chr20 8081561 8081960 -58586045 + MLT1A1 LTR MaLR 4 365 0 304 316 52 19 chr20 8082436 8082591 -58585414 - MIR SINE MIR 0 262 103 194 167 67 100 chr20 8083650 8083710 -58584295 - L2 LINE L2 -85 3228 3171 1527 217 73 11 chr20 8083842 8084280 -58583725 + Charlie4a DNA MER1_type 44 508 0 183 262 24 48 chr20 8084341 8084425 -58583580 - L2 LINE L2 -270 3002 2921 4094 36 4 2 chr20 8084515 8085010 -58582995 + L1PA4 LINE L1 5657 6152 -3 192 97 0 0 chr20 8085013 8085044 -58582961 + (A)n Simple_repeat Simple_repeat 1 31 0 416 19 19 0 chr20 8085900 8085953 -58582052 + (TC)n Simple_repeat Simple_repeat 1 54 0 342 0 0 0 chr20 8085952 8085990 -58582015 + (CA)n Simple_repeat Simple_repeat 1 38 0 * 3020 171 20 12 chr20 8087945 8088536 -58579469 - L1MA8 LINE L1 0 6291 5696 193 85 0 43 chr20 8088538 8088585 -58579420 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 1800 160 10 0 chr20 8088607 8088810 -58579195 - L1MA8 LINE L1 -599 5692 5483 971 164 273 17 chr20 8088810 8089048 -58578957 - AluJb SINE Alu -3 299 1 1800 160 10 0 chr20 8089048 8089157 -58578848 - L1MA8 LINE L1 -808 5483 5377 1699 170 0 32 chr20 8089426 8089738 -58578267 + AluJb SINE Alu 11 312 0 316 396 6 59 chr20 8090241 8090684 -58577321 - L2 LINE L2 -47 3225 2817 916 238 116 62 chr20 8090697 8091067 -58576938 - LTR16C LTR ERVL 0 491 102 294 344 39 28 chr20 8091276 8091456 -58576549 - MIR SINE MIR -52 210 29 2199 105 0 3 chr20 8093077 8093373 -58574632 - AluSx SINE Alu -17 295 1 237 250 73 0 chr20 8094403 8094471 -58573534 - MIR SINE MIR -70 192 120 677 286 6 11 chr20 8094501 8094679 -58573326 - MER5B DNA MER1_type -1 177 1 433 288 124 34 chr20 8094904 8095137 -58572868 - MIR SINE MIR 0 262 9 440 301 44 54 chr20 8096038 8096334 -58571671 + HAL1b LINE L1 415 707 -641 496 313 106 51 chr20 8097065 8097698 -58570307 + L1M4 LINE L1 2337 3004 -3142 31 0 0 0 chr20 8097698 8097729 -58570276 + AT_rich Low_complexity Low_complexity 1 31 0 28 48 0 0 chr20 8097784 8097826 -58570179 + AT_rich Low_complexity Low_complexity 1 42 0 501 288 16 0 chr20 8098192 8098317 -58569688 + MER63A DNA MER1_type 59 185 -25 255 122 0 0 chr20 8098384 8098433 -58569572 + (GGGA)n Simple_repeat Simple_repeat 2 50 0 930 62 78 0 chr20 8098928 8099057 -58568948 - MER85 DNA T2_type 0 139 1 204 167 24 0 chr20 8099269 8099311 -58568694 + (TA)n Simple_repeat Simple_repeat 2 44 0 889 175 6 6 chr20 8099840 8100011 -58567994 - L1M2 LINE L1 -603 5709 5539 2267 98 21 3 chr20 8100011 8100337 -58567668 + L1MB1 LINE L1 5827 6168 0 7603 28 5 0 chr20 8100703 8101810 -58566195 + L1PA3 LINE L1 5045 6155 0 602 333 99 17 chr20 8102129 8102423 -58565582 + L2 LINE L2 2559 2876 -438 346 276 73 8 chr20 8102425 8102548 -58565457 + L2 LINE L2 3182 3312 -1 216 0 0 0 chr20 8102759 8102783 -58565222 + (CA)n Simple_repeat Simple_repeat 2 25 0 309 216 17 95 chr20 8102795 8102911 -58565094 - MIR SINE MIR -66 142 36 2183 109 6 31 chr20 8104348 8104669 -58563336 - AluSq SINE Alu 0 313 1 237 234 0 0 chr20 8105087 8105134 -58562871 - AluJ/monomer SINE Alu -250 53 7 1855 31 4 0 chr20 8105826 8106052 -58561953 - L1PA4 LINE L1 -3 6152 5926 21 36 0 0 chr20 8106515 8106543 -58561462 + AT_rich Low_complexity Low_complexity 1 28 0 245 349 129 8 chr20 8107096 8107228 -58560777 + MIR SINE MIR 5 152 -110 488 302 11 39 chr20 8107230 8107412 -58560593 + MIR SINE MIR 13 189 -73 4809 297 102 13 chr20 8107688 8108323 -58559682 - L2 LINE L2 0 3313 2736 2602 42 0 3 chr20 8108323 8108630 -58559375 + AluY SINE Alu 3 308 -3 4809 297 102 13 chr20 8108630 8110244 -58557761 - L2 LINE L2 -577 2736 863 1662 252 57 51 chr20 8110250 8110797 -58557208 - MLT1H1 LTR MaLR -2 591 3 368 283 6 127 chr20 8110808 8110981 -58557024 - L2 LINE L2 -3161 153 2 28 0 0 0 chr20 8111222 8111250 -58556755 + AT_rich Low_complexity Low_complexity 1 28 0 923 283 135 15 chr20 8111598 8112196 -58555809 - L1ME3A LINE L1 -266 5973 5306 1826 277 105 50 chr20 8112259 8114257 -58553748 - L1ME3A LINE L1 -1071 5144 3038 291 276 147 55 chr20 8114270 8114705 -58553300 - L1ME3A LINE L1 -3504 2711 2237 2481 118 8 14 chr20 8114774 8115139 -58552866 - THE1B LTR MaLR 0 364 2 569 323 102 32 chr20 8115549 8115992 -58552013 + LTR67 LTR ERVL 84 557 0 2210 105 7 0 chr20 8116129 8116425 -58551580 - AluY SINE Alu -13 298 1 673 219 86 48 chr20 8116599 8116809 -58551196 - MER20 DNA MER1_type -1 218 1 354 330 37 26 chr20 8116814 8117005 -58551000 - MER117 DNA MER1_type -3 194 2 260 55 73 0 chr20 8118462 8118517 -58549488 + (TA)n Simple_repeat Simple_repeat 2 60 0 333 0 0 0 chr20 8118520 8118557 -58549448 + (CA)n Simple_repeat Simple_repeat 2 38 0 1869 146 16 13 chr20 8119069 8119378 -58548627 + AluSg SINE Alu 1 310 0 1731 255 79 98 chr20 8120189 8122082 -58545923 - L1M4 LINE L1 -2066 4080 2223 308 246 45 36 chr20 8122089 8122199 -58545806 - L1ME3A LINE L1 -4109 2287 2177 49 84 0 0 chr20 8122573 8122692 -58545313 + AT_rich Low_complexity Low_complexity 1 119 0 307 289 92 52 chr20 8122756 8122803 -58545202 + L1M4 LINE L1 3898 3942 -2204 1110 220 37 71 chr20 8122803 8123181 -58544824 - MLT1A1 LTR MaLR 0 365 1 307 289 92 52 chr20 8123181 8123438 -58544567 + L1M4 LINE L1 3942 4214 -1932 1038 170 30 20 chr20 8123716 8123916 -58544089 + MSTB LTR MaLR 225 426 0 1020 330 25 19 chr20 8123917 8124433 -58543572 - HUERS-P1 LTR ERV1 -4033 3089 2571 2040 112 47 53 chr20 8124595 8124934 -58543071 - MER1B DNA MER1_type 0 337 1 673 343 43 56 chr20 8125673 8126507 -58541498 - HUERS-P1 LTR ERV1 -5384 1738 916 1354 274 24 64 chr20 8126697 8127412 -58540593 - HUERS-P1 LTR ERV1 -5068 1608 535 312 322 59 17 chr20 8127569 8127687 -58540318 - HUERS-P1 LTR ERV1 -6116 147 25 3498 150 25 33 chr20 8127715 8128323 -58539682 - LTR26 LTR ERV1 0 603 1 1373 191 10 58 chr20 8128553 8128862 -58539143 + AluJo SINE Alu 1 294 -18 2181 16 0 0 chr20 8129189 8129439 -58538566 + L1HS LINE L1 5902 6151 -4 1718 154 54 40 chr20 8129514 8129884 -58538121 - THE1C LTR MaLR 0 375 1 494 141 31 4 chr20 8130778 8130889 -58537116 + L1MA5A LINE L1 6187 6300 0 239 150 0 0 chr20 8131211 8131251 -58536754 + L1MC5 LINE L1 7173 7212 -749 728 186 28 7 chr20 8131282 8131427 -58536578 - MER3 DNA MER1_type -55 154 7 700 219 94 81 chr20 8131433 8131890 -58536115 + L1MC5 LINE L1 7331 7793 -168 197 348 76 8 chr20 8132721 8132839 -58535166 + MIR SINE MIR 20 145 -63 43 99 0 0 chr20 8133050 8133191 -58534814 + AT_rich Low_complexity Low_complexity 1 141 0 24 0 0 0 chr20 8134422 8134446 -58533559 + AT_rich Low_complexity Low_complexity 1 24 0 552 84 0 0 chr20 8134870 8134953 -58533052 + (TC)n Simple_repeat Simple_repeat 2 84 0 826 278 48 0 chr20 8135236 8135445 -58532560 - MER58A DNA MER1_type 0 224 6 495 218 50 122 chr20 8135456 8135759 -58532246 + LTR37B LTR ERV1 114 394 -74 311 313 35 28 chr20 8137335 8137479 -58530526 + MIR SINE MIR 52 196 -66 258 238 16 16 chr20 8137949 8138012 -58529993 + LTR67 LTR ERVL 488 550 -7 2384 75 0 3 chr20 8138108 8138400 -58529605 + AluY SINE Alu 3 293 -18 343 337 12 41 chr20 8138698 8138867 -58529138 + MER5B DNA MER1_type 10 173 -5 374 344 17 28 chr20 8139791 8139971 -58528034 - MER5A DNA MER1_type -8 181 4 428 277 14 35 chr20 8140385 8140526 -58527479 - MER5B DNA MER1_type 0 178 41 272 268 242 7 chr20 8140556 8140709 -58527296 - MER5A DNA MER1_type 0 189 1 * 305 303 53 13 chr20 8140709 8140854 -58527151 + MIR SINE MIR 30 180 -82 867 202 58 0 chr20 8141088 8141261 -58526744 - MER5A DNA MER1_type -6 183 1 287 424 32 0 chr20 8141548 8141673 -58526332 - L2 LINE L2 -28 3244 3116 2693 125 38 20 chr20 8144105 8144554 -58523451 + LTR32 LTR ERVL 15 471 0 421 258 129 26 chr20 8145225 8145380 -58522625 + MER5B DNA MER1_type 2 172 -6 960 201 5 31 chr20 8145395 8145589 -58522416 - MER5A DNA MER1_type 0 189 1 1171 288 57 2 chr20 8146203 8146637 -58521368 + L1ME3 LINE L1 5638 6094 -68 285 211 87 124 chr20 8146878 8147039 -58520966 + HAL1 LINE L1 43 197 -2310 554 319 50 38 chr20 8147197 8147676 -58520329 + HAL1 LINE L1 611 1095 -1412 510 323 65 32 chr20 8147866 8148114 -58519891 + HAL1 LINE L1 1161 1416 -1091 1246 280 77 49 chr20 8148139 8148854 -58519151 + L1M4 LINE L1 15 749 -5793 200 128 0 26 chr20 8148974 8149013 -58518992 + (TAAAAA)n Simple_repeat Simple_repeat 2 39 0 191 149 0 21 chr20 8149019 8149066 -58518939 + (TTAAA)n Simple_repeat Simple_repeat 4 49 0 2322 273 110 23 chr20 8149080 8149616 -58518389 + L1M4 LINE L1 1164 1652 -4994 243 0 0 0 chr20 8149616 8149643 -58518362 + (CAA)n Simple_repeat Simple_repeat 1 27 0 2322 273 110 23 chr20 8149643 8150530 -58517475 + L1M4 LINE L1 1652 2711 -3935 1218 294 140 12 chr20 8151306 8151820 -58516185 + MLT1G LTR MaLR 9 588 -2 262 248 69 99 chr20 8152479 8152580 -58515425 + L2 LINE L2 3199 3296 -17 775 296 136 19 chr20 8152762 8153020 -58514985 + LTR16A LTR ERVL 18 331 -119 2699 153 5 9 chr20 8153020 8153450 -58514555 - MSTC LTR MaLR 0 428 1 775 296 136 19 chr20 8153450 8153552 -58514453 + LTR16A LTR ERVL 331 420 -30 270 0 0 0 chr20 8153614 8153644 -58514361 + (CA)n Simple_repeat Simple_repeat 1 30 0 680 274 129 30 chr20 8155652 8156125 -58511880 + MLT1H LTR MaLR 28 542 0 608 200 236 71 chr20 8156578 8156858 -58511147 + MER46C DNA MER2_type 9 334 -4 1280 97 36 109 chr20 8157687 8157935 -58510070 + MER30 DNA MER1_type 1 230 0 264 233 56 33 chr20 8158069 8158159 -58509846 + LTR67 LTR ERVL 446 537 -20 390 205 90 57 chr20 8158459 8158581 -58509424 - MLT1I LTR MaLR -9 400 275 240 35 0 0 chr20 8158968 8158997 -58509008 + (CA)n Simple_repeat Simple_repeat 2 30 0 8966 111 11 2 chr20 8159394 8160646 -58507359 + THE1B-int LTR MaLR 318 1580 0 2389 100 30 46 chr20 8160646 8161016 -58506989 + THE1B LTR MaLR 1 364 0 536 255 11 100 chr20 8161061 8161332 -58506673 + L1M4 LINE L1 4501 4747 -1399 2032 217 73 26 chr20 8161350 8162331 -58505674 + L1MB5 LINE L1 4637 5646 -528 2738 136 7 7 chr20 8162331 8162759 -58505246 + MSTA LTR MaLR 1 428 0 500 149 11 0 chr20 8162760 8162847 -58505158 + MSTA-int LTR MaLR 2 89 -1562 472 127 0 0 chr20 8162847 8162918 -58505087 + MSTA LTR MaLR 358 428 0 2409 198 19 13 chr20 8162918 8163402 -58504603 + L1MB5 LINE L1 5642 6131 -43 1963 153 0 0 chr20 8163402 8163689 -58504316 - AluSx SINE Alu -21 291 5 2409 198 19 13 chr20 8163689 8163734 -58504271 + L1MB5 LINE L1 6131 6174 0 7150 235 71 33 chr20 8164154 8165327 -58502678 - L1MD1 LINE L1 -7 6235 5108 1701 151 25 7 chr20 8165327 8165612 -58502393 + AluJb SINE Alu 1 290 -22 7150 235 71 33 chr20 8165612 8166398 -58501607 - L1MD1 LINE L1 -1134 5108 4353 2058 150 0 0 chr20 8166398 8166704 -58501301 - AluSx SINE Alu -4 308 3 7150 235 71 33 chr20 8166704 8168508 -58499497 - L1MD1 LINE L1 -1889 4353 2327 1065 83 0 0 chr20 8168517 8168661 -58499344 + L1PB1 LINE L1 5641 5784 -367 396 0 0 0 chr20 8168669 8168713 -58499292 + (TA)n Simple_repeat Simple_repeat 2 45 0 668 67 19 19 chr20 8168714 8168818 -58499187 + AluY SINE Alu 208 311 0 339 191 0 0 chr20 8168934 8169002 -58499003 + (TA)n Simple_repeat Simple_repeat 1 68 0 1689 149 100 7 chr20 8169002 8169311 -58498694 + L1PB1 LINE L1 5782 6119 -32 22 0 0 0 chr20 8169317 8169339 -58498666 + AT_rich Low_complexity Low_complexity 1 22 0 2230 192 92 29 chr20 8169344 8169853 -58498152 + L1MC1 LINE L1 1881 2483 -4097 1525 60 20 0 chr20 8169853 8170054 -58497951 + L1PA4 LINE L1 5949 6153 -2 2230 192 92 29 chr20 8170054 8170213 -58497792 + L1MC1 LINE L1 2483 2631 -3949 1375 228 148 27 chr20 8170254 8170415 -58497590 + L1MC1 LINE L1 4434 4574 -1852 2350 73 7 0 chr20 8170415 8170737 -58497268 + AluY SINE Alu 1 311 0 1375 228 148 27 chr20 8170737 8171197 -58496808 + L1MC1 LINE L1 4574 5130 -1296 1968 67 0 52 chr20 8171197 8171464 -58496541 + AluY SINE Alu 36 288 -23 302 222 0 0 chr20 8171465 8171528 -58496477 + L1MC4 LINE L1 6640 6702 -1340 258 156 0 0 chr20 8171530 8171575 -58496430 + (TATATG)n Simple_repeat Simple_repeat 2 46 0 5946 185 18 12 chr20 8171575 8173064 -58494941 + L1MC1 LINE L1 5116 6613 0 523 274 70 32 chr20 8173516 8173702 -58494303 - MIR SINE MIR 0 262 70 1272 262 78 47 chr20 8173723 8174059 -58493946 + L1MC4 LINE L1 7415 7772 -270 2100 115 14 0 chr20 8174059 8174354 -58493651 - AluSx SINE Alu -13 299 1 1272 262 78 47 chr20 8174354 8174506 -58493499 + L1MC4 LINE L1 7772 7918 -124 2088 128 6 9 chr20 8174622 8174957 -58493048 - L1PA16 LINE L1 -6 6160 5827 237 309 124 0 chr20 8177332 8177429 -58490576 - MIR SINE MIR -114 148 40 2253 85 0 0 chr20 8177434 8177738 -58490267 - AluY SINE Alu 0 304 1 38 51 0 0 chr20 8177813 8177872 -58490133 + AT_rich Low_complexity Low_complexity 1 59 0 187 359 54 0 chr20 8178137 8178229 -58489776 - MIR SINE MIR -61 147 51 1875 152 14 3 chr20 8178631 8178920 -58489085 - AluJb SINE Alu -20 292 1 338 303 241 40 chr20 8178922 8179246 -58488759 - L2 LINE L2 0 3313 2925 1566 305 62 25 chr20 8179299 8179949 -58488056 - L2 LINE L2 -453 2861 2188 331 255 114 7 chr20 8180807 8180956 -58487049 - L1ME4a LINE L1 -1 6120 5956 227 333 0 0 chr20 8181058 8181124 -58486881 - MER2 DNA MER2_type -279 66 1 773 274 161 15 chr20 8181340 8181669 -58486336 + LTR16A1 LTR ERVL 17 393 -64 * 895 303 35 21 chr20 8181665 8181955 -58486050 - MLT1H LTR MaLR -224 325 32 745 142 0 17 chr20 8181975 8182095 -58485910 + FLAM_C SINE Alu 1 118 -15 703 271 29 14 chr20 8182228 8182435 -58485570 + MIR SINE MIR 49 258 -4 360 319 136 44 chr20 8182983 8183350 -58484655 + L3b LINE CR1 1177 1577 -6 398 317 166 34 chr20 8184125 8184343 -58483662 + L3 LINE CR1 792 980 -597 1735 184 19 19 chr20 8184343 8184708 -58483297 + MLT1A1 LTR MaLR 1 365 0 398 317 166 34 chr20 8184708 8184839 -58483166 + L3 LINE CR1 980 1187 -390 207 265 59 0 chr20 8185460 8185537 -58482468 - MIR SINE MIR -73 135 55 199 191 48 0 chr20 8185526 8185568 -58482437 + L2 LINE L2 3270 3313 0 * 265 182 23 0 chr20 8185602 8185646 -58482359 + MER4E LTR ERV1 652 696 -70 303 345 35 0 chr20 8186053 8186166 -58481839 - L2 LINE L2 -290 2982 2866 3759 121 279 78 chr20 8186190 8187480 -58480525 - pTR5 LTR ERV1 0 2438 743 375 371 113 9 chr20 8187480 8187825 -58480180 - L2 LINE L2 -465 2849 2469 533 306 42 49 chr20 8187856 8188163 -58479842 + MLT1J LTR MaLR 2 306 -205 521 336 88 4 chr20 8188264 8188490 -58479515 - L2 LINE L2 -870 2444 2200 800 242 87 10 chr20 8188506 8188795 -58479210 + L1M4 LINE L1 4572 4882 -1264 532 216 28 28 chr20 8188799 8188975 -58479030 + L1M4 LINE L1 4978 5153 -993 605 121 250 8 chr20 8188976 8189150 -58478855 + L1M4 LINE L1 5230 5441 -737 500 163 10 0 chr20 8189150 8189248 -58478757 + L1MA6 LINE L1 6202 6300 0 3194 100 4 18 chr20 8189277 8189768 -58478237 - L1MA2 LINE L1 0 6304 5821 1221 102 0 0 chr20 8189779 8189945 -58478060 - L1PA7 LINE L1 -8 6146 5981 1979 201 98 19 chr20 8189945 8190417 -58477588 + LTR22 LTR ERVK 1 509 0 30811 99 8 14 chr20 8190418 8194122 -58473883 - L1PA7 LINE L1 -166 6303 2620 2281 96 0 3 chr20 8194122 8194415 -58473590 - AluY SINE Alu -8 303 12 30811 99 8 14 chr20 8194415 8196347 -58471658 - L1PA7 LINE L1 -3849 2620 679 396 234 2 3 chr20 8196345 8196458 -58471547 - L1M4 LINE L1 -726 5442 5331 * 1318 273 53 31 chr20 8196498 8197041 -58470964 + L1M4 LINE L1 3519 4073 -2073 * 3729 83 0 6 chr20 8197039 8197534 -58470471 - L1P3 LINE L1 -5130 1331 840 1951 124 0 0 chr20 8197526 8197817 -58470188 - L1M1 LINE L1 -532 5772 5482 * 3261 171 11 43 chr20 8197818 8198579 -58469426 + L1MB7 LINE L1 5428 6163 -21 2049 135 16 0 chr20 8198581 8198885 -58469120 - AluSx SINE Alu -3 309 1 748 226 42 6 chr20 8199516 8199684 -58468321 - MER5A DNA MER1_type -8 181 8 25 51 0 0 chr20 8200190 8200229 -58467776 + AT_rich Low_complexity Low_complexity 1 39 0 206 241 56 0 chr20 8200327 8200381 -58467624 + GA-rich Low_complexity Low_complexity 4 60 0 288 239 120 11 chr20 8200469 8200561 -58467444 - MER5A DNA MER1_type -77 112 11 227 289 0 0 chr20 8200791 8200843 -58467162 - L2 LINE L2 0 3272 3221 2284 72 0 27 chr20 8201146 8201438 -58466567 - AluY SINE Alu 0 311 28 22 94 0 0 chr20 8201665 8201729 -58466276 + AT_rich Low_complexity Low_complexity 1 64 0 294 324 181 14 chr20 8201959 8202169 -58465836 - L2 LINE L2 -45 3268 3024 234 105 0 0 chr20 8202175 8202213 -58465792 + (TG)n Simple_repeat Simple_repeat 1 38 0 29 0 0 0 chr20 8202217 8202246 -58465759 + AT_rich Low_complexity Low_complexity 1 29 0 1949 202 55 0 chr20 8202268 8202650 -58465355 - MLT2C2 LTR ERVL -61 403 1 187 361 204 24 chr20 8202852 8203757 -58464248 - L2 LINE L2 -1916 1398 331 29 0 0 0 chr20 8204090 8204119 -58463886 + AT_rich Low_complexity Low_complexity 1 29 0 201 196 0 0 chr20 8204963 8205014 -58462991 + (TA)n Simple_repeat Simple_repeat 2 52 0 325 174 165 41 chr20 8205737 8205858 -58462147 + L1ME4a LINE L1 5308 5443 -2599 282 157 0 20 chr20 8205991 8206042 -58461963 - L2 LINE L2 -1 3312 3263 213 132 26 0 chr20 8206010 8206048 -58461957 - MIR SINE MIR -13 249 211 * 372 220 0 11 chr20 8206364 8206455 -58461550 - MLT1I LTR MaLR 0 409 320 270 136 0 0 chr20 8206456 8206500 -58461505 + (TCCC)n Simple_repeat Simple_repeat 3 46 0 2068 157 0 3 chr20 8206500 8206806 -58461199 - AluSx SINE Alu -7 305 1 2602 143 11 0 chr20 8206964 8207405 -58460600 + L1MA2 LINE L1 5857 6302 -2 320 285 73 95 chr20 8207615 8208068 -58459937 + L1ME4a LINE L1 5630 6072 -49 26 30 0 0 chr20 8209237 8209270 -58458735 + AT_rich Low_complexity Low_complexity 1 33 0 2352 85 0 7 chr20 8209817 8210112 -58457893 + AluY SINE Alu 10 302 -9 616 292 121 48 chr20 8210905 8211449 -58456556 + MLT1G LTR MaLR 1 584 -6 1417 332 143 38 chr20 8211500 8212593 -58455412 - L3 LINE CR1 -118 1459 252 182 256 148 57 chr20 8212799 8212975 -58455030 + L2 LINE L2 3097 3288 -25 238 232 0 61 chr20 8213245 8213327 -58454678 - LTR16C LTR ERVL -50 441 365 266 267 0 17 chr20 8214520 8214580 -58453425 + L2 LINE L2 3246 3304 -9 1759 72 0 4 chr20 8216151 8216387 -58451618 - LTR12 LTR ERV1 0 714 480 280 258 21 0 chr20 8216388 8216485 -58451520 - LTR30 LTR ERV1 -80 642 544 997 72 158 0 chr20 8216485 8216637 -58451368 - LTR12 LTR ERV1 -437 277 102 * 5705 106 31 0 chr20 8216632 8217498 -58450507 - HERV9 LTR ERV1 -7506 893 1 5538 81 94 3 chr20 8217498 8218255 -58449750 - LTR12 LTR ERV1 0 826 1 534 214 86 0 chr20 8219068 8219208 -58448797 - MER3 DNA MER1_type -57 152 1 1779 226 108 22 chr20 8219458 8219949 -58448056 - MLT1F LTR MaLR -8 534 2 608 265 24 29 chr20 8220219 8220389 -58447616 - MER5B DNA MER1_type -7 171 3 420 257 230 7 chr20 8221125 8221277 -58446728 - MER5A DNA MER1_type 0 189 4 340 365 14 14 chr20 8222891 8223039 -58444966 + MIR3 SINE MIR 33 180 -28 2520 49 0 10 chr20 8223068 8223372 -58444633 - AluY SINE Alu -10 301 1 2789 164 138 18 chr20 8225948 8226576 -58441429 + MER39 LTR ERV1 1 704 -3 2125 166 53 33 chr20 8228824 8229276 -58438729 - LTR32 LTR ERVL 0 471 11 853 274 62 19 chr20 8229482 8229726 -58438279 - L1MEc LINE L1 -6026 370 106 1981 116 0 34 chr20 8229726 8230050 -58437955 - AluSx SINE Alu 0 315 2 853 274 62 19 chr20 8230050 8230125 -58437880 - L1MEc LINE L1 -6290 106 36 416 194 143 0 chr20 8230331 8230429 -58437576 - MLT1H LTR MaLR 0 467 356 276 241 0 65 chr20 8231205 8231313 -58436692 + LTR67 LTR ERVL 457 557 0 369 0 0 0 chr20 8231580 8231621 -58436384 + (TG)n Simple_repeat Simple_repeat 1 41 0 184 239 22 0 chr20 8231695 8231741 -58436264 - MIR3 SINE MIR -50 158 112 217 333 0 26 chr20 8232624 8232738 -58435267 + GA-rich Low_complexity Low_complexity 2 112 0 250 213 16 0 chr20 8233505 8233566 -58434439 + LTR37A LTR ERV1 111 172 -254 2172 96 17 7 chr20 8233626 8233928 -58434077 + AluSq SINE Alu 1 305 -8 615 98 0 74 chr20 8233929 8234051 -58433954 + LTR37A LTR ERV1 314 426 0 207 250 0 44 chr20 8234276 8234344 -58433661 + (CATA)n Simple_repeat Simple_repeat 3 67 0 648 227 162 0 chr20 8238155 8238353 -58429652 - MLT1H LTR MaLR -206 343 114 416 289 107 93 chr20 8239078 8239216 -58428789 + MLT1J2 LTR MaLR 6 141 -309 1028 228 27 5 chr20 8239216 8239435 -58428570 + MER58A DNA MER1_type 1 224 0 416 289 107 93 chr20 8239435 8239735 -58428270 + MLT1J2 LTR MaLR 141 450 0 204 333 0 0 chr20 8240537 8240597 -58427408 + L2 LINE L2 3249 3308 -5 1763 308 76 17 chr20 8240858 8241813 -58426192 - L2 LINE L2 0 3313 2304 308 127 0 79 chr20 8243005 8243131 -58424874 + (GGAAA)n Simple_repeat Simple_repeat 5 120 0 252 307 23 0 chr20 8243135 8243223 -58424782 - MIR3 SINE MIR -34 174 85 388 238 64 89 chr20 8243322 8243557 -58424448 + L1ME LINE L1 4795 5023 -1123 2176 86 0 0 chr20 8243576 8243868 -58424137 + L1PA7 LINE L1 5859 6150 -4 517 253 12 37 chr20 8243868 8244001 -58424004 + L1ME LINE L1 5555 5685 -479 1706 183 23 0 chr20 8244001 8244302 -58423703 + AluJo SINE Alu 1 308 -4 517 253 12 37 chr20 8244302 8244330 -58423675 + L1ME LINE L1 5685 5712 -452 1480 214 7 10 chr20 8244677 8244966 -58423039 + AluJo SINE Alu 1 288 -24 299 329 19 93 chr20 8245400 8245616 -58422389 - L2 LINE L2 0 3272 3073 217 186 0 0 chr20 8246287 8246330 -58421675 - L2 LINE L2 0 3313 3271 287 250 0 13 chr20 8246679 8246766 -58421239 + L1PA16 LINE L1 4812 4897 -1249 * 4401 157 9 4 chr20 8246764 8247541 -58420464 + L1PA16 LINE L1 5284 6064 -102 372 252 78 0 chr20 8248690 8248793 -58419212 + MER81 DNA DNA 2 112 -2 27 0 0 0 chr20 8249547 8249574 -58418431 + AT_rich Low_complexity Low_complexity 1 27 0 23 68 0 0 chr20 8251033 8251077 -58416928 + AT_rich Low_complexity Low_complexity 1 44 0 377 297 31 16 chr20 8252328 8252456 -58415549 + MER94 DNA DNA 5 134 0 311 261 80 0 chr20 8253273 8253361 -58414644 + MIR3 SINE MIR 62 156 -52 253 196 22 116 chr20 8253806 8253859 -58414146 - MER53 DNA DNA -5 184 128 2101 105 18 3 chr20 8253859 8254144 -58413861 - AluSc SINE Alu -20 289 1 253 196 22 116 chr20 8254144 8254228 -58413777 - MER53 DNA DNA -61 128 60 270 349 138 0 chr20 8255431 8255540 -58412465 - L2 LINE L2 0 3272 3149 195 318 236 7 chr20 8255689 8255837 -58412168 - L3 LINE CR1 -401 1176 995 27 62 0 0 chr20 8256561 8256609 -58411396 + AT_rich Low_complexity Low_complexity 1 48 0 3505 117 9 16 chr20 8257584 8257603 -58410402 + L1MA2 LINE L1 5627 5645 -659 2166 124 48 20 chr20 8257603 8257957 -58410048 + THE1B LTR MaLR 1 364 0 3505 117 9 16 chr20 8257957 8258510 -58409495 + L1MA2 LINE L1 5645 6195 -109 27 0 0 0 chr20 8259252 8259279 -58408726 + AT_rich Low_complexity Low_complexity 1 27 0 843 195 100 0 chr20 8259533 8259723 -58408282 - MER3 DNA MER1_type 0 209 1 1127 234 112 104 chr20 8259994 8260454 -58407551 + HAL1b LINE L1 317 772 -576 273 57 0 0 chr20 8260454 8260489 -58407516 + (TA)n Simple_repeat Simple_repeat 2 36 0 2412 81 0 0 chr20 8260489 8260786 -58407219 - AluY SINE Alu -14 297 1 2064 135 0 7 chr20 8260794 8261082 -58406923 + AluSx SINE Alu 4 289 -23 1127 234 112 104 chr20 8261082 8261450 -58406555 + HAL1b LINE L1 778 1165 -183 3382 154 66 46 chr20 8261450 8262163 -58405842 - LTR8A LTR ERV1 0 727 1 1127 234 112 104 chr20 8262163 8262290 -58405715 + HAL1b LINE L1 1165 1290 -58 27 49 0 0 chr20 8262367 8262408 -58405597 + AT_rich Low_complexity Low_complexity 1 41 0 192 272 112 48 chr20 8262466 8262591 -58405414 - MIR SINE MIR -82 180 48 424 263 118 7 chr20 8263831 8263983 -58404022 + Charlie8 DNA MER1_type 10 178 -2239 1159 225 131 0 chr20 8264012 8264332 -58403673 + L1ME3 LINE L1 5721 6082 -80 347 200 56 11 chr20 8264524 8264614 -58403391 + MER5A DNA MER1_type 96 189 0 23 54 0 0 chr20 8265493 8265530 -58402475 + AT_rich Low_complexity Low_complexity 1 37 0 1013 262 10 15 chr20 8265690 8266013 -58401992 + MER45C DNA AcHobo 8 375 -578 861 237 163 0 chr20 8266013 8266228 -58401777 + MER45C DNA AcHobo 704 953 0 2329 269 47 30 chr20 8267612 8268639 -58399366 - L2 LINE L2 0 3313 2277 2065 116 0 0 chr20 8269574 8269849 -58398156 - AluSx SINE Alu -14 298 24 347 293 44 75 chr20 8270171 8270386 -58397619 + MLT1H LTR MaLR 113 308 -101 181 295 0 64 chr20 8271570 8271648 -58396357 - L2 LINE L2 0 3272 3200 1498 227 158 27 chr20 8272075 8272550 -58395455 + MLT1H LTR MaLR 13 549 0 463 96 96 0 chr20 8273087 8273160 -58394845 - MADE1 DNA Mariner 0 80 1 2109 130 0 0 chr20 8273600 8273912 -58394093 - AluSq SINE Alu 0 312 1 21 0 0 0 chr20 8273931 8273952 -58394053 + AT_rich Low_complexity Low_complexity 1 21 0 6012 135 9 1 chr20 8273952 8275079 -58392926 - L1PB1 LINE L1 -3 6148 5015 2039 128 3 3 chr20 8275477 8275775 -58392230 - AluSx SINE Alu -6 306 9 222 37 0 0 chr20 8276147 8276174 -58391831 + (TAGA)n Simple_repeat Simple_repeat 1 27 0 201 158 18 35 chr20 8276174 8276231 -58391774 + (TA)n Simple_repeat Simple_repeat 1 56 0 3643 130 20 74 chr20 8276581 8277311 -58390694 + LTR8 LTR ERV1 1 691 0 600 174 58 58 chr20 8277802 8277957 -58390048 - MER5B DNA MER1_type -11 167 13 2077 91 0 82 chr20 8279164 8279483 -58388522 + AluSg SINE Alu 1 293 -17 22 0 0 0 chr20 8279848 8279870 -58388135 + AT_rich Low_complexity Low_complexity 1 22 0 743 158 0 0 chr20 8279992 8280106 -58387899 + MLT1A2 LTR MaLR 1 114 -260 678 297 162 14 chr20 8280235 8280673 -58387332 - HAL1 LINE L1 -607 1900 1398 374 267 59 55 chr20 8280740 8280995 -58387010 - HAL1 LINE L1 -1220 1287 1032 225 325 74 51 chr20 8281539 8281930 -58386075 - HAL1 LINE L1 -2107 400 1 633 197 27 20 chr20 8281997 8282144 -58385861 + MER3 DNA MER1_type 13 160 -49 711 267 87 5 chr20 8282547 8282753 -58385252 + MIR SINE MIR 40 262 0 417 147 0 0 chr20 8283573 8283641 -58384364 + Tigger1 DNA MER2_type 1 68 -2350 977 119 7 0 chr20 8283643 8283786 -58384219 + Tigger1 DNA MER2_type 2110 2253 -165 13848 120 66 16 chr20 8283795 8286028 -58381977 + Tigger1 DNA MER2_type 74 2418 0 804 173 0 0 chr20 8286844 8287077 -58380928 + (TGG)n Simple_repeat Simple_repeat 1 233 0 746 188 0 6 chr20 8287117 8287298 -58380707 + (TGG)n Simple_repeat Simple_repeat 1 180 0 356 292 90 39 chr20 8287611 8287844 -58380161 + L2 LINE L2 2553 2797 -517 24 32 0 0 chr20 8288106 8288137 -58379868 + AT_rich Low_complexity Low_complexity 1 31 0 297 151 0 0 chr20 8288162 8288215 -58379790 + (TGAA)n Simple_repeat Simple_repeat 2 54 0 718 144 0 0 chr20 8288449 8288567 -58379438 + L1MA5A LINE L1 6177 6294 -3 261 311 19 66 chr20 8290221 8290327 -58377678 - MIR3 SINE MIR -95 113 13 1064 234 37 11 chr20 8290732 8291005 -58377000 + LTR16C LTR ERVL 212 491 0 2182 99 10 7 chr20 8291506 8291808 -58376197 + AluSx SINE Alu 1 303 -9 375 23 0 0 chr20 8292759 8292803 -58375202 + (TA)n Simple_repeat Simple_repeat 2 45 0 290 211 0 0 chr20 8293397 8293449 -58374556 + MIR SINE MIR 49 100 -162 347 280 60 10 chr20 8293475 8293575 -58374430 - L2 LINE L2 -4 3309 3205 225 158 0 0 chr20 8293754 8293792 -58374213 + MLT1D LTR MaLR 459 496 -9 * 1769 209 106 5 chr20 8293788 8294176 -58373829 - MLT1D LTR MaLR -52 453 27 505 289 71 16 chr20 8294379 8294695 -58373310 - L2 LINE L2 -297 3016 2686 216 375 17 25 chr20 8297417 8297537 -58370468 - MIR3 SINE MIR -78 130 12 2179 110 0 3 chr20 8298236 8298528 -58369477 + AluSq SINE Alu 2 292 -21 1295 167 21 177 chr20 8298537 8298956 -58369049 + MLT2D LTR ERVL 1 354 -60 269 143 0 0 chr20 8299071 8299113 -58368892 + MLT2D LTR ERVL 423 464 0 21 82 0 0 chr20 8299661 8299710 -58368295 + AT_rich Low_complexity Low_complexity 1 49 0 775 164 132 19 chr20 8299868 8300027 -58367978 - MER5A DNA MER1_type -3 186 10 185 262 107 60 chr20 8300168 8300252 -58367753 - L3 LINE CR1 -9 1568 1481 2110 152 0 0 chr20 8300456 8300759 -58367246 + AluSx SINE Alu 1 303 -9 222 385 0 0 chr20 8301078 8301143 -58366862 + MER91 DNA MER1_type 132 196 0 22 0 0 0 chr20 8303269 8303291 -58364714 + AT_rich Low_complexity Low_complexity 1 22 0 3030 166 81 25 chr20 8303291 8303414 -58364591 - L1MA7 LINE L1 -1 6290 6175 1814 154 44 68 chr20 8303414 8303798 -58364207 + THE1C LTR MaLR 1 375 0 3030 166 81 25 chr20 8303798 8304341 -58363664 - L1MA7 LINE L1 -116 6175 5587 1708 129 6 79 chr20 8304337 8304531 -58363474 + L1M2 LINE L1 5141 5348 -943 * 5152 152 9 6 chr20 8304531 8305525 -58362480 + L1PA16 LINE L1 5170 6166 0 1708 129 6 79 chr20 8305525 8305810 -58362195 + L1M2 LINE L1 5348 5592 -699 585 179 28 0 chr20 8307137 8307243 -58360762 - MER5A DNA MER1_type -77 112 4 306 0 0 0 chr20 8307593 8307627 -58360378 + (TTG)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr20 8307693 8307714 -58360291 + AT_rich Low_complexity Low_complexity 1 21 0 186 71 0 0 chr20 8309448 8309476 -58358529 + (TG)n Simple_repeat Simple_repeat 1 28 0 299 315 163 5 chr20 8309550 8309734 -58358271 + MIR SINE MIR 30 242 -20 23 54 0 0 chr20 8310759 8310796 -58357209 + AT_rich Low_complexity Low_complexity 1 37 0 281 283 74 66 chr20 8311252 8311449 -58356556 + MIR SINE MIR 64 261 -1 190 391 11 0 chr20 8312054 8312146 -58355859 - MIR3 SINE MIR -49 159 67 648 261 54 71 chr20 8312159 8312439 -58355566 + Charlie8 DNA MER1_type 1 275 -2142 356 0 23 0 chr20 8312453 8312497 -58355508 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 286 180 16 0 chr20 8312833 8312894 -58355111 + MER53 DNA DNA 127 188 -1 2114 103 3 3 chr20 8312986 8313268 -58354737 + AluSc SINE Alu 5 286 -23 651 294 63 18 chr20 8313877 8314163 -58353842 - LTR16C LTR ERVL 0 491 193 821 291 8 8 chr20 8314791 8315035 -58352970 + MIR SINE MIR 9 252 -10 2033 119 52 35 chr20 8315347 8315716 -58352289 + THE1C LTR MaLR 1 375 0 437 270 37 37 chr20 8316104 8316400 -58351605 - L1ME LINE L1 -335 5786 5491 357 246 9 0 chr20 8316444 8316558 -58351447 - L1P5 LINE L1 -722 5434 5320 250 242 106 0 chr20 8317456 8317522 -58350483 + MIR SINE MIR 58 130 -78 795 241 80 5 chr20 8317548 8317772 -58350233 - MIR SINE MIR -4 258 18 25 0 0 0 chr20 8318038 8318063 -58349942 + AT_rich Low_complexity Low_complexity 1 25 0 1775 249 16 18 chr20 8318247 8318761 -58349244 - L1ME1 LINE L1 -5 6161 5649 396 0 0 0 chr20 8319902 8319946 -58348059 + (TG)n Simple_repeat Simple_repeat 2 45 0 183 80 0 0 chr20 8319947 8319972 -58348033 + (CG)n Simple_repeat Simple_repeat 1 25 0 346 235 82 20 chr20 8322142 8322240 -58345765 + L2 LINE L2 3187 3290 -23 1628 232 22 56 chr20 8324451 8324672 -58343333 - L1MA9 LINE L1 -38 6274 6047 1739 110 158 14 chr20 8324672 8324963 -58343042 + MER1B DNA MER1_type 1 333 -4 1628 232 22 56 chr20 8324963 8325297 -58342708 - L1MA9 LINE L1 -265 6047 5738 2136 128 3 13 chr20 8325306 8325611 -58342394 - AluSx SINE Alu -10 302 1 566 233 129 52 chr20 8325969 8326074 -58341931 + LTR16C LTR ERVL 242 337 -154 2369 93 0 0 chr20 8326074 8326375 -58341630 - AluSc SINE Alu -8 301 1 566 233 129 52 chr20 8326375 8326501 -58341504 + LTR16C LTR ERVL 337 491 0 2050 146 83 24 chr20 8326586 8326996 -58341009 + Tigger2a DNA MER2_type 1 434 0 864 186 81 0 chr20 8328128 8328300 -58339705 + MER5A DNA MER1_type 1 186 -3 13136 222 19 12 chr20 8328351 8329872 -58338133 - L1PA16 LINE L1 0 7604 6096 210 91 0 0 chr20 8329872 8329905 -58338100 + (TTG)n Simple_repeat Simple_repeat 2 34 0 13136 222 19 12 chr20 8329905 8333583 -58334422 - L1PA16 LINE L1 -1508 6096 2355 227 265 73 0 chr20 8333602 8333670 -58334335 - LTR9B LTR ERV1 -3 641 569 2294 105 3 10 chr20 8334207 8334520 -58333485 + AluSp SINE Alu 1 311 -2 37855 73 5 9 chr20 8334968 8339598 -58328407 - L1PA5 LINE L1 -34 6120 1515 7489 87 4 3 chr20 8339598 8340566 -58327439 + LTR5 LTR ERVK 1 969 0 37855 73 5 9 chr20 8340566 8342065 -58325940 - L1PA5 LINE L1 -4639 1515 12 257 313 12 0 chr20 8342328 8342408 -58325597 + CT-rich Low_complexity Low_complexity 2 82 0 1417 202 0 46 chr20 8342429 8342731 -58325274 - AluJo SINE Alu -20 292 5 189 279 0 0 chr20 8342756 8342835 -58325170 + CT-rich Low_complexity Low_complexity 3 81 0 203 0 37 0 chr20 8342911 8342938 -58325067 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 280 299 8 0 chr20 8343778 8343895 -58324110 - L1MEd LINE L1 -5947 172 55 439 279 92 71 chr20 8344167 8344461 -58323544 + MLT1I LTR MaLR 20 319 -90 1413 139 11 73 chr20 8345215 8345489 -58322516 - AluJo SINE Alu -13 299 43 28 48 0 0 chr20 8345509 8345551 -58322454 + AT_rich Low_complexity Low_complexity 1 42 0 2367 97 0 3 chr20 8345919 8346227 -58321778 + AluSx SINE Alu 1 307 -5 25 31 0 0 chr20 8346934 8346966 -58321039 + AT_rich Low_complexity Low_complexity 1 32 0 254 258 113 70 chr20 8347045 8347231 -58320774 + MLT1J LTR MaLR 224 417 -94 2325 66 31 0 chr20 8347274 8347561 -58320444 - AluY SINE Alu -15 296 1 229 203 81 0 chr20 8347660 8347734 -58320271 + (CATATA)n Simple_repeat Simple_repeat 2 81 0 569 143 0 0 chr20 8348024 8348108 -58319897 - AluJ/FLAM SINE Alu -228 84 1 695 165 0 0 chr20 8348897 8349006 -58318999 + FLAM_C SINE Alu 1 109 -34 2338 92 0 22 chr20 8349033 8349349 -58318656 + AluY SINE Alu 1 309 -2 28 0 0 0 chr20 8350113 8350141 -58317864 + AT_rich Low_complexity Low_complexity 1 28 0 689 155 14 40 chr20 8350373 8350521 -58317484 + LTR37A LTR ERV1 1 144 -282 394 344 26 10 chr20 8350571 8350763 -58317242 + L2 LINE L2 2423 2617 -697 872 214 0 40 chr20 8350793 8350994 -58317011 + AluJo SINE Alu 1 193 -119 1132 205 57 4 chr20 8351020 8351249 -58316756 + MLT1D LTR MaLR 261 501 -4 1759 167 44 26 chr20 8351309 8351650 -58316355 + MER7A DNA MER2_type 2 346 0 383 311 87 31 chr20 8351797 8351867 -58316138 - MER5B DNA MER1_type -6 172 107 362 279 133 6 chr20 8351867 8351911 -58316094 - MER45A DNA AcHobo -1403 178 141 1928 146 0 14 chr20 8351911 8352198 -58315807 + AluJo SINE Alu 2 284 -28 362 279 133 6 chr20 8352198 8352311 -58315694 - MER45A DNA AcHobo -1440 141 1 383 311 87 31 chr20 8352311 8352401 -58315604 - MER5B DNA MER1_type -71 107 3 1357 224 92 22 chr20 8352450 8352891 -58315114 - MER110A LTR ERV1 0 491 41 542 194 75 75 chr20 8357267 8357427 -58310578 - MIR SINE MIR -95 167 8 585 261 19 0 chr20 8357578 8357739 -58310266 + L1ME3 LINE L1 5721 5884 -278 450 290 46 0 chr20 8357848 8357979 -58310026 - L1MEd LINE L1 -5386 733 597 766 252 126 52 chr20 8358221 8358546 -58309459 - L1MEd LINE L1 -5751 368 20 232 174 101 0 chr20 8358552 8358621 -58309384 - MER103 DNA DNA -10 156 81 991 163 0 0 chr20 8358625 8358778 -58309227 - AluJo SINE Alu -159 153 1 712 256 77 51 chr20 8359339 8359579 -58308426 + MLT1J1 LTR MaLR 1 252 -194 2053 142 0 0 chr20 8359579 8359881 -58308124 - AluSx SINE Alu -10 302 1 712 256 77 51 chr20 8359881 8359952 -58308053 + MLT1J1 LTR MaLR 252 320 -126 23 33 0 0 chr20 8360763 8360793 -58307212 + AT_rich Low_complexity Low_complexity 1 30 0 27 29 0 0 chr20 8362465 8362499 -58305506 + AT_rich Low_complexity Low_complexity 1 34 0 2195 97 20 10 chr20 8362857 8363157 -58304848 + AluSp SINE Alu 2 304 -9 1896 155 37 3 chr20 8363186 8363534 -58304471 - MER46B DNA MER2_type -1 235 1 250 328 0 0 chr20 8365851 8365967 -58302038 + CT-rich Low_complexity Low_complexity 1 116 0 380 204 65 46 chr20 8366497 8366605 -58301400 + MLT1K LTR MaLR 452 561 -27 681 128 40 8 chr20 8368028 8368153 -58299852 - L1MA6 LINE L1 0 6300 6172 234 150 0 0 chr20 8368636 8368676 -58299329 + (TA)n Simple_repeat Simple_repeat 1 40 0 2200 112 3 0 chr20 8368676 8368971 -58299034 - AluJb SINE Alu -16 296 1 22 0 0 0 chr20 8370418 8370440 -58297565 + AT_rich Low_complexity Low_complexity 1 22 0 2215 108 10 0 chr20 8372141 8372436 -58295569 + AluSg SINE Alu 1 298 -12 2257 99 0 0 chr20 8373413 8373707 -58294298 + AluSg SINE Alu 1 294 -16 1369 136 40 9 chr20 8374769 8374997 -58293008 - MER46A DNA MER2_type 0 236 2 21 0 0 0 chr20 8375748 8375769 -58292236 + AT_rich Low_complexity Low_complexity 1 21 0 333 249 272 6 chr20 8377294 8377467 -58290538 + L1M4 LINE L1 2134 2352 -3794 21 57 0 0 chr20 8377606 8377641 -58290364 + AT_rich Low_complexity Low_complexity 1 35 0 874 214 62 26 chr20 8378877 8379069 -58288936 - MER58A DNA MER1_type -25 199 1 1692 289 166 22 chr20 8379548 8380605 -58287400 + L2 LINE L2 951 2160 -1154 2972 112 9 14 chr20 8380696 8380742 -58287263 + MSTA LTR MaLR 1 46 -382 2844 126 70 8 chr20 8380742 8381225 -58286780 + LTR10D LTR ERV1 1 513 0 2972 112 9 14 chr20 8381225 8381608 -58286397 + MSTA LTR MaLR 46 428 0 609 345 82 23 chr20 8381979 8382417 -58285588 + L2 LINE L2 2804 3267 -5 806 305 123 37 chr20 8383676 8384465 -58283540 + L2 LINE L2 1729 2585 -729 247 347 100 37 chr20 8384464 8384735 -58283270 + L2 LINE L2 2828 3115 -157 * 447 296 61 61 chr20 8385155 8385402 -58282603 + MIR SINE MIR 16 262 0 202 397 0 13 chr20 8385535 8385613 -58282392 - L2 LINE L2 -9 3263 3187 443 338 20 33 chr20 8385623 8385774 -58282231 - L2 LINE L2 -10 3262 3114 195 139 0 0 chr20 8386866 8386902 -58281103 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 238 309 21 0 chr20 8387142 8387236 -58280769 - L1ME LINE L1 -490 5631 5536 532 265 94 0 chr20 8388168 8388349 -58279656 + MIR SINE MIR 64 261 -1 26 30 0 0 chr20 8388447 8388480 -58279525 + AT_rich Low_complexity Low_complexity 1 33 0 3951 123 34 65 chr20 8388853 8389652 -58278353 + LTR1 LTR ERV1 12 785 0 2235 105 0 25 chr20 8390150 8390465 -58277540 - AluSq SINE Alu -6 307 1 1197 267 112 44 chr20 8390663 8391454 -58276551 + L2 LINE L2 2458 3308 -5 22 35 0 0 chr20 8391623 8391652 -58276353 + AT_rich Low_complexity Low_complexity 1 29 0 558 259 112 68 chr20 8392728 8393263 -58274742 + L1MC4 LINE L1 7127 7678 -364 255 225 0 28 chr20 8393316 8393387 -58274618 + L1MC4 LINE L1 7836 7904 -138 31 0 0 0 chr20 8393782 8393813 -58274192 + AT_rich Low_complexity Low_complexity 1 31 0 188 325 167 42 chr20 8394322 8394442 -58273563 - L2 LINE L2 -5 3267 3133 301 306 14 0 chr20 8395319 8395391 -58272614 + L2 LINE L2 3200 3272 0 489 182 73 0 chr20 8395587 8395715 -58272290 + MIR SINE MIR 64 199 -63 212 220 20 0 chr20 8396531 8396581 -58271424 + (TA)n Simple_repeat Simple_repeat 1 51 0 197 272 167 35 chr20 8397611 8397725 -58270280 + L2 LINE L2 3185 3313 0 229 281 44 97 chr20 8397829 8398057 -58269948 - L2 LINE L2 0 3313 3098 183 80 0 0 chr20 8398396 8398421 -58269584 + (T)n Simple_repeat Simple_repeat 1 25 0 335 246 164 41 chr20 8398669 8398864 -58269141 + MER20 DNA MER1_type 1 219 0 180 340 0 0 chr20 8398867 8398917 -58269088 + L2 LINE L2 3222 3271 -1 961 131 0 0 chr20 8399638 8399775 -58268230 + AluSg/x SINE Alu 149 285 -25 1139 71 14 5 chr20 8401711 8401926 -58266079 + (GA)n Simple_repeat Simple_repeat 1 217 0 317 342 124 42 chr20 8402648 8403166 -58264839 - L1M2 LINE L1 -5618 1231 672 * 329 304 72 101 chr20 8402896 8403353 -58264652 + L1M2 LINE L1 755 1198 -5651 281 280 54 11 chr20 8403716 8403809 -58264196 + MIR3 SINE MIR 107 203 -5 297 200 213 0 chr20 8404760 8404840 -58263165 + MIR SINE MIR 136 232 -30 255 86 0 0 chr20 8404863 8404898 -58263107 - MADE1 DNA Mariner 0 80 46 181 358 109 15 chr20 8405038 8405175 -58262830 + L2 LINE L2 2848 2997 -316 2355 94 19 38 chr20 8405267 8405638 -58262367 + THE1B LTR MaLR 1 364 0 663 241 143 93 chr20 8405802 8406305 -58261700 + MLT1F LTR MaLR 1 528 -14 645 272 161 31 chr20 8407009 8407358 -58260647 - MLT1G LTR MaLR -195 395 2 249 190 86 52 chr20 8407358 8407409 -58260596 + MLT1I LTR MaLR 353 405 -4 327 281 84 39 chr20 8408248 8408451 -58259554 + L1M4 LINE L1 4266 4477 -1669 230 308 37 0 chr20 8408617 8408724 -58259281 + L1M4 LINE L1 4729 4839 -1307 311 136 34 102 chr20 8408755 8408843 -58259162 - MLT1I LTR MaLR 0 409 344 573 266 149 56 chr20 8410039 8410830 -58257175 - L1M4 LINE L1 -1016 5130 4266 2165 206 154 4 chr20 8410850 8411402 -58256603 + MLT1E1 LTR MaLR 1 635 -19 1234 274 88 28 chr20 8411454 8412088 -58255917 - L1M4 LINE L1 -1956 4190 3519 207 0 0 0 chr20 8412634 8412657 -58255348 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 317 314 126 0 chr20 8413764 8413939 -58254066 + L1ME4a LINE L1 5813 6009 -112 1941 138 19 19 chr20 8414014 8414326 -58253679 - AluSx SINE Alu 0 312 1 866 291 72 23 chr20 8414346 8414693 -58253312 - L1MC4a LINE L1 -1964 5844 5481 1196 12 47 7 chr20 8414901 8415330 -58252675 + (TATG)n Simple_repeat Simple_repeat 1 446 0 211 215 134 107 chr20 8416414 8416549 -58251456 + MIR SINE MIR 17 148 -63 1300 213 91 31 chr20 8417282 8417700 -58250305 - LTR47B LTR ERVL 0 443 1 3342 119 52 17 chr20 8417832 8418410 -58249595 + L1MA5 LINE L1 5684 6281 -19 337 295 40 45 chr20 8418429 8418629 -58249376 - L1MC5 LINE L1 -118 7843 7645 354 350 121 8 chr20 8419126 8419366 -58248639 - L3 LINE CR1 -744 833 567 254 239 63 42 chr20 8419455 8419597 -58248408 - L1MC5 LINE L1 -394 7567 7423 1574 238 129 24 chr20 8419613 8420117 -58247888 - L1ME1 LINE L1 -156 6010 5454 863 169 51 20 chr20 8420120 8420315 -58247690 + L1MB4 LINE L1 5784 5984 -196 537 273 0 7 chr20 8420806 8420960 -58247045 + L1MB4 LINE L1 6022 6174 -6 2018 144 3 0 chr20 8421052 8421351 -58246654 + AluSq SINE Alu 1 300 -13 180 0 0 0 chr20 8421639 8421659 -58246346 + (A)n Simple_repeat Simple_repeat 1 20 0 25 51 0 0 chr20 8422055 8422094 -58245911 + AT_rich Low_complexity Low_complexity 1 39 0 1026 216 28 5 chr20 8422265 8422478 -58245527 - MER20 DNA MER1_type -1 218 1 3234 217 82 21 chr20 8423230 8424206 -58243799 - L1MC4a LINE L1 -1 7807 6773 1899 115 18 4 chr20 8424332 8424632 -58243373 + AluSx SINE Alu 1 304 0 21 36 0 0 chr20 8424748 8424776 -58243229 + AT_rich Low_complexity Low_complexity 1 28 0 231 289 96 0 chr20 8425687 8425822 -58242183 + L1M1 LINE L1 5255 5402 -2406 232 186 0 68 chr20 8425876 8425935 -58242070 + L1M1 LINE L1 5482 5536 -766 1719 160 7 7 chr20 8427526 8427807 -58240198 + AluJo SINE Alu 2 282 -30 189 115 33 33 chr20 8427812 8427873 -58240132 + (TAA)n Simple_repeat Simple_repeat 2 62 0 21 82 0 0 chr20 8427877 8427926 -58240079 + AT_rich Low_complexity Low_complexity 1 49 0 253 262 0 0 chr20 8428047 8428108 -58239897 + L2 LINE L2 3253 3313 0 645 233 158 16 chr20 8428663 8428916 -58239089 + LTR50 LTR ERVL 383 671 -124 21 36 0 0 chr20 8429871 8429899 -58238106 + AT_rich Low_complexity Low_complexity 1 28 0 514 274 79 32 chr20 8429921 8430078 -58237927 + L1ME LINE L1 5562 5731 -431 923 169 75 203 chr20 8430078 8430609 -58237396 + MER4C LTR ERV1 2 464 -1 514 274 79 32 chr20 8430609 8430641 -58237364 + L1ME LINE L1 5731 5760 -402 1613 108 100 4 chr20 8431151 8431401 -58236604 - AluSc SINE Alu -35 274 1 391 318 127 31 chr20 8431735 8432418 -58235587 + L1M3 LINE L1 4027 4775 -1371 1196 251 21 12 chr20 8432613 8432940 -58235065 - LTR16A LTR ERVL 0 450 121 2024 141 3 0 chr20 8433251 8433550 -58234455 - AluSx SINE Alu -12 300 1 380 279 137 18 chr20 8434494 8434864 -58233141 + L1M3 LINE L1 5237 5625 -496 457 276 120 51 chr20 8435858 8436075 -58231930 - MIR SINE MIR -10 252 21 302 196 6 184 chr20 8436193 8436314 -58231691 - L1MC4 LINE L1 -372 7670 7582 2063 224 83 41 chr20 8436314 8436880 -58231125 - MLT1G LTR MaLR 0 590 1 302 196 6 184 chr20 8436880 8436916 -58231089 - L1MC4 LINE L1 -460 7582 7541 3526 79 6 4 chr20 8437294 8437777 -58230228 - L1PA8 LINE L1 -1 6171 5688 1742 239 2 21 chr20 8437870 8438297 -58229708 - L1ME1 LINE L1 -14 6152 5734 2213 80 3 3 chr20 8439847 8440159 -58227846 - L1PA8 LINE L1 0 6172 5861 923 288 56 72 chr20 8440374 8440619 -58227386 - L2 LINE L2 -6 3307 3073 5739 39 0 1 chr20 8440619 8441315 -58226690 - L1PA4 LINE L1 0 6155 5461 923 288 56 72 chr20 8441315 8441566 -58226439 - L2 LINE L2 -240 3073 2819 2151 248 92 20 chr20 8441752 8442448 -58225557 - L1ME3A LINE L1 -5 6165 5411 2031 130 27 0 chr20 8442448 8442749 -58225256 - AluSx SINE Alu -3 309 1 2151 248 92 20 chr20 8442749 8442794 -58225211 - L1ME3A LINE L1 -759 5411 5371 335 202 21 64 chr20 8444160 8444254 -58223751 - L2 LINE L2 0 3313 3224 23 86 0 0 chr20 8446641 8446699 -58221306 + AT_rich Low_complexity Low_complexity 1 58 0 350 285 95 6 chr20 8447417 8447575 -58220430 - MLT1H LTR MaLR -37 512 341 236 302 174 20 chr20 8447683 8447832 -58220173 - MLT1H LTR MaLR -375 174 3 1563 284 29 25 chr20 8448821 8449307 -58218698 + LTR16C LTR ERVL 4 491 0 214 281 125 0 chr20 8450559 8450623 -58217382 - MIR SINE MIR -102 160 89 905 273 14 44 chr20 8451604 8451862 -58216143 - LTR16A1 LTR ERVL -1 456 207 207 0 0 0 chr20 8451862 8451885 -58216120 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 905 273 14 44 chr20 8451885 8451923 -58216082 - LTR16A1 LTR ERVL -250 207 169 289 167 128 51 chr20 8452569 8452647 -58215358 + MER103 DNA DNA 38 121 -45 786 278 96 38 chr20 8452743 8453402 -58214603 + L1M4 LINE L1 4012 4708 -1438 25 51 0 0 chr20 8453879 8453918 -58214087 + AT_rich Low_complexity Low_complexity 1 39 0 396 310 49 27 chr20 8454062 8454246 -58213759 + MIR SINE MIR 1 188 -74 225 286 84 24 chr20 8455499 8455786 -58212219 + L1ME LINE L1 4383 4686 -1460 1854 145 20 30 chr20 8455794 8456098 -58211907 - AluSx SINE Alu -11 301 1 1220 246 77 31 chr20 8456582 8457083 -58210922 + MLT1E LTR MaLR 1 587 -6 731 324 88 9 chr20 8457172 8457638 -58210367 + L1ME LINE L1 5263 5765 -405 33 85 0 0 chr20 8457733 8457815 -58210190 + AT_rich Low_complexity Low_complexity 1 82 0 180 0 0 0 chr20 8457839 8457859 -58210146 + (TTA)n Simple_repeat Simple_repeat 2 21 0 218 104 104 0 chr20 8457936 8457984 -58210021 + T-rich Low_complexity Low_complexity 2 54 0 25 65 0 0 chr20 8457991 8458037 -58209968 + AT_rich Low_complexity Low_complexity 1 46 0 36 53 0 0 chr20 8458097 8458154 -58209851 + AT_rich Low_complexity Low_complexity 1 57 0 466 271 117 35 chr20 8458468 8458773 -58209232 - MLT1H LTR MaLR 0 626 202 225 0 0 0 chr20 8460278 8460303 -58207702 + (CA)n Simple_repeat Simple_repeat 2 26 0 333 0 0 0 chr20 8461230 8461267 -58206738 + (GA)n Simple_repeat Simple_repeat 2 38 0 23 0 0 0 chr20 8462323 8462346 -58205659 + AT_rich Low_complexity Low_complexity 1 23 0 495 279 75 47 chr20 8462826 8463145 -58204860 - L1ME LINE L1 -480 5684 5357 282 249 107 24 chr20 8463425 8463594 -58204411 - L1ME LINE L1 -1072 5074 4892 21 0 0 0 chr20 8463671 8463692 -58204313 + AT_rich Low_complexity Low_complexity 1 21 0 412 221 9 71 chr20 8463741 8463854 -58204151 - L2 LINE L2 -1 3312 3207 2217 116 0 0 chr20 8464012 8464306 -58203699 - AluSg SINE Alu -16 294 1 25 0 0 0 chr20 8464504 8464529 -58203476 + AT_rich Low_complexity Low_complexity 1 25 0 1171 240 97 68 chr20 8465278 8465795 -58202210 + MLT1F1 LTR MaLR 11 567 0 1129 234 57 95 chr20 8466717 8467140 -58200865 + LTR16C LTR ERVL 85 491 0 207 319 59 25 chr20 8467482 8467601 -58200404 - MIR SINE MIR -3 259 137 271 301 70 19 chr20 8467605 8467656 -58200349 - L1MA10 LINE L1 -2 6332 6282 9433 251 60 32 chr20 8467656 8473652 -58194353 - L1ME1 LINE L1 -52 6183 36 469 310 49 0 chr20 8473664 8473806 -58194199 - MIR SINE MIR -113 149 1 208 359 10 19 chr20 8474050 8474153 -58193852 + L3b LINE CR1 1318 1419 -164 300 200 0 0 chr20 8474713 8474778 -58193227 + (CA)n Simple_repeat Simple_repeat 2 66 0 218 277 62 0 chr20 8474999 8475064 -58192941 + MIR SINE MIR 182 250 -12 432 353 79 5 chr20 8476864 8477054 -58190951 + MIR SINE MIR 20 223 -39 251 219 29 29 chr20 8477459 8477564 -58190441 - Charlie7 DNA MER1_type -32 2580 2476 338 260 0 0 chr20 8477571 8477648 -58190357 - Charlie7 DNA MER1_type -2511 101 25 2187 233 80 9 chr20 8478845 8479382 -58188623 + MLT1G LTR MaLR 10 584 -6 240 254 30 37 chr20 8479380 8479514 -58188491 + Charlie7 DNA MER1_type 2480 2612 0 * 231 217 38 57 chr20 8480005 8480111 -58187894 - Charlie7 DNA MER1_type -19 2593 2490 271 156 0 0 chr20 8480208 8480253 -58187752 + L1MB7 LINE L1 6069 6113 -71 3538 173 46 10 chr20 8480259 8480972 -58187033 - L1MB7 LINE L1 -78 6106 5368 182 255 20 39 chr20 8481042 8481093 -58186912 + L2 LINE L2 3174 3223 -49 710 291 15 0 chr20 8483187 8483393 -58184612 - MER63A DNA MER1_type -1 209 1 484 298 75 0 chr20 8483482 8483643 -58184362 - LTR16C LTR ERVL -1 490 318 3790 227 36 52 chr20 8483644 8485457 -58182548 + L1MD1 LINE L1 4264 6039 -203 * 8991 191 11 21 chr20 8485452 8485661 -58182344 - L1P4 LINE L1 -626 6243 6033 2316 102 3 6 chr20 8485661 8485974 -58182031 + AluSp SINE Alu 2 313 0 8991 191 11 21 chr20 8485974 8488999 -58179006 - L1P4 LINE L1 -836 6033 1506 4099 198 13 1 chr20 8488995 8489712 -58178293 + L1PA15-16 LINE L1 408 1132 -5717 * 2706 148 5 0 chr20 8489745 8490157 -58177848 - L1P4 LINE L1 -6434 415 2 958 287 45 41 chr20 8490494 8491144 -58176861 + L2 LINE L2 2666 3313 0 605 321 38 51 chr20 8491430 8491870 -58176135 - MLT1K LTR MaLR 0 588 97 42470 36 21 5 chr20 8492265 8498316 -58169689 - L1PA3 LINE L1 -1 6154 3 1064 240 114 53 chr20 8498986 8499441 -58168564 - LTR33 LTR ERVL 0 521 39 192 414 0 0 chr20 8500520 8500607 -58167398 + MIR SINE MIR 79 165 -97 1401 228 92 76 chr20 8500971 8501502 -58166503 - MLT1H LTR MaLR -8 582 1 479 301 111 10 chr20 8502837 8503036 -58164969 + MIR SINE MIR 37 255 -7 2690 271 65 61 chr20 8503078 8504519 -58163486 + HAL1 LINE L1 649 2101 -406 277 75 38 0 chr20 8504519 8504572 -58163433 + (TA)n Simple_repeat Simple_repeat 2 56 0 2690 271 65 61 chr20 8504572 8504981 -58163024 + HAL1 LINE L1 2101 2507 0 192 77 0 0 chr20 8505357 8505383 -58162622 + (TA)n Simple_repeat Simple_repeat 2 27 0 546 219 8 47 chr20 8506118 8506246 -58161759 - MER5A DNA MER1_type -63 126 4 270 0 0 0 chr20 8506621 8506651 -58161354 + (GA)n Simple_repeat Simple_repeat 2 31 0 243 0 0 0 chr20 8506650 8506677 -58161328 + (TG)n Simple_repeat Simple_repeat 1 27 0 * 1106 202 4 40 chr20 8506978 8507206 -58160799 + MER58A DNA MER1_type 2 221 -3 2453 75 3 0 chr20 8507467 8507774 -58160231 - AluY SINE Alu -3 308 1 403 285 123 12 chr20 8508827 8509080 -58158925 - MLT1J LTR MaLR 0 511 231 236 319 0 0 chr20 8509103 8509175 -58158830 - MLT1J LTR MaLR -439 72 1 380 230 18 44 chr20 8510489 8510602 -58157403 - MLT1J1 LTR MaLR -133 313 204 712 303 35 4 chr20 8511047 8511278 -58156727 + MIR SINE MIR 1 238 -24 228 304 13 13 chr20 8511302 8511381 -58156624 - MIR SINE MIR -68 140 62 325 346 72 20 chr20 8511572 8511725 -58156280 + MIR SINE MIR 3 163 -99 351 297 69 45 chr20 8511910 8512112 -58155893 - MLT1L LTR MaLR -387 228 22 238 277 0 15 chr20 8512126 8512191 -58155814 + MIR SINE MIR 193 256 -6 1586 51 0 28 chr20 8512362 8512577 -58155428 + L1PA4 LINE L1 5947 6155 0 434 34 34 0 chr20 8513487 8513546 -58154459 + (GGAAA)n Simple_repeat Simple_repeat 5 65 0 252 341 0 0 chr20 8513835 8513917 -58154088 + L2 LINE L2 3187 3268 -4 1451 235 111 16 chr20 8514170 8514709 -58153296 - L1ME1 LINE L1 -101 6065 5486 362 94 16 0 chr20 8514709 8514773 -58153232 + (TC)n Simple_repeat Simple_repeat 1 65 0 401 155 0 0 chr20 8514791 8514862 -58153143 - L1ME LINE L1 -634 5528 5458 195 129 0 0 chr20 8514865 8514896 -58153109 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 265 269 26 0 chr20 8515558 8515636 -58152369 + GA-rich Low_complexity Low_complexity 2 81 0 29 0 0 0 chr20 8515964 8515993 -58152012 + GC_rich Low_complexity Low_complexity 1 29 0 459 257 66 7 chr20 8517942 8518078 -58149927 - L2 LINE L2 -3 3310 3167 22 0 0 0 chr20 8518261 8518283 -58149722 + AT_rich Low_complexity Low_complexity 1 22 0 386 344 23 0 chr20 8518533 8518661 -58149344 + MIR SINE MIR 20 150 -112 469 308 19 6 chr20 8519561 8519720 -58148285 + MIR SINE MIR 88 248 -14 2567 40 0 0 chr20 8519743 8520039 -58147966 + AluY SINE Alu 1 296 -15 830 207 43 22 chr20 8520995 8521227 -58146778 - L1ME3A LINE L1 -5 6165 5929 36 62 0 0 chr20 8522375 8522439 -58145566 + AT_rich Low_complexity Low_complexity 1 64 0 2185 92 3 32 chr20 8522480 8522794 -58145211 - AluSx SINE Alu -7 305 1 248 375 62 16 chr20 8524012 8524140 -58143865 - MIR3 SINE MIR -65 143 10 2243 105 10 0 chr20 8524190 8524494 -58143511 - AluSp SINE Alu -6 307 1 2151 107 17 13 chr20 8524740 8525040 -58142965 + AluSx SINE Alu 1 301 -11 214 309 62 69 chr20 8526420 8526708 -58141297 + L2 LINE L2 1608 1893 -1421 210 343 201 34 chr20 8526796 8527175 -58140830 - L2 LINE L2 0 3272 2831 1005 184 29 0 chr20 8527257 8527464 -58140541 - MER20 DNA MER1_type -6 213 1 557 115 10 6 chr20 8527533 8527632 -58140373 + L1ME LINE L1 5365 5463 -701 1874 148 13 69 chr20 8528441 8528833 -58139172 - MLT1B LTR MaLR 0 390 21 281 255 21 43 chr20 8528864 8528958 -58139047 + L3 LINE CR1 1210 1301 -276 1000 202 101 24 chr20 8529103 8529400 -58138605 - MER33 DNA MER1_type -2 322 3 587 225 39 42 chr20 8529410 8529663 -58138342 + MER106B DNA MER1_type 1 1059 0 541 306 38 24 chr20 8529683 8529892 -58138113 + MIR SINE MIR 51 262 0 882 239 5 0 chr20 8530511 8530695 -58137310 + MER5A DNA MER1_type 3 187 -2 1030 48 0 0 chr20 8531271 8531395 -58136610 - AluY SINE Alu -12 299 176 2766 164 42 43 chr20 8531885 8532488 -58135517 + L1MB3 LINE L1 5572 6173 -10 325 273 98 28 chr20 8532559 8532702 -58135303 - MIR SINE MIR 0 262 110 21 0 0 0 chr20 8535957 8535978 -58132027 + AT_rich Low_complexity Low_complexity 1 21 0 268 324 124 13 chr20 8537866 8538165 -58129840 - L1MC/D LINE L1 -2154 5654 5323 325 272 22 0 chr20 8538175 8538267 -58129738 - L1MC/D LINE L1 -867 5279 5186 1200 249 81 3 chr20 8539530 8539863 -58128142 + LTR16C LTR ERVL 110 468 -23 336 352 73 18 chr20 8540026 8540245 -58127760 + MIR SINE MIR 15 245 -17 441 130 14 0 chr20 8541760 8541829 -58126176 - THE1C LTR MaLR 0 375 306 327 94 41 0 chr20 8541825 8541892 -58126113 - THE1A LTR MaLR -314 41 1 * 11791 90 8 11 chr20 8541892 8543104 -58124901 - THE1B-int LTR MaLR 0 1580 371 2359 103 3 3 chr20 8543104 8543415 -58124590 + AluSp SINE Alu 1 311 -2 11791 90 8 11 chr20 8543415 8543786 -58124219 - THE1B-int LTR MaLR -1209 371 1 2086 120 79 15 chr20 8543786 8544128 -58123877 - THE1B LTR MaLR 0 364 1 27 0 0 0 chr20 8544238 8544265 -58123740 + AT_rich Low_complexity Low_complexity 1 27 0 23 54 0 0 chr20 8544276 8544313 -58123692 + AT_rich Low_complexity Low_complexity 1 37 0 459 190 5 82 chr20 8544523 8544718 -58123287 + (TA)n Simple_repeat Simple_repeat 1 180 0 470 264 16 66 chr20 8544741 8544923 -58123082 - MIR SINE MIR -73 189 17 775 192 0 70 chr20 8545062 8545234 -58122771 - MER5B DNA MER1_type -6 172 13 907 252 0 0 chr20 8546445 8546655 -58121350 - LTR16C LTR ERVL -5 486 277 730 270 48 0 chr20 8547003 8547233 -58120772 + MER102b DNA MER1_type 89 329 -12 250 267 71 89 chr20 8547687 8547776 -58120229 + MLT1K LTR MaLR 114 203 -385 652 176 181 33 chr20 8547776 8547958 -58120047 - MER3 DNA MER1_type 0 209 1 250 267 71 89 chr20 8547958 8548093 -58119912 + MLT1K LTR MaLR 203 334 -254 209 288 136 32 chr20 8548709 8548834 -58119171 - MIR SINE MIR -32 230 93 210 338 154 17 chr20 8548835 8549075 -58118930 + L2 LINE L2 3039 3311 -2 663 335 145 17 chr20 8549167 8549863 -58118142 + L2 LINE L2 1307 2091 -1223 201 252 102 55 chr20 8549997 8550124 -58117881 + L2 LINE L2 2340 2472 -842 204 333 40 27 chr20 8550125 8550275 -58117730 + L2 LINE L2 2828 2979 -293 515 284 77 16 chr20 8550393 8550587 -58117418 + MER63A DNA MER1_type 1 206 -4 369 277 10 0 chr20 8550590 8550691 -58117314 + L2 LINE L2 3210 3311 -2 294 382 47 12 chr20 8550766 8550936 -58117069 - MIR3 SINE MIR -17 191 16 1698 204 87 40 chr20 8551166 8551672 -58116333 - MLT1H LTR MaLR -3 546 17 479 345 109 9 chr20 8552670 8552890 -58115115 + MIR SINE MIR 21 262 0 22 35 0 0 chr20 8552893 8552922 -58115083 + AT_rich Low_complexity Low_complexity 1 29 0 268 270 0 0 chr20 8554156 8554230 -58113775 - MER116 DNA Mariner -2 78 5 847 268 40 0 chr20 8554854 8555104 -58112901 + MIR SINE MIR 3 262 0 781 265 45 59 chr20 8555623 8556060 -58111945 - L2 LINE L2 -200 3113 2690 5825 227 54 24 chr20 8556061 8558012 -58109993 + L1MD2 LINE L1 7 2019 -4387 348 289 7 22 chr20 8558027 8558162 -58109843 + L1MD2 LINE L1 2072 2204 -4202 1353 191 3 68 chr20 8558165 8558474 -58109531 + AluJo SINE Alu 1 289 -23 314 87 0 0 chr20 8558475 8558521 -58109484 - MADE1 DNA Mariner -34 46 1 521 233 11 23 chr20 8558537 8558713 -58109292 + L1MD2 LINE L1 2243 2416 -3990 4841 187 53 49 chr20 8558718 8560227 -58107778 + L1MD2 LINE L1 5075 6602 -17 1790 175 38 15 chr20 8560501 8560844 -58107161 + MLT1A1 LTR MaLR 14 364 -1 207 69 0 0 chr20 8561013 8561042 -58106963 + (TTA)n Simple_repeat Simple_repeat 1 29 0 8699 181 19 17 chr20 8561093 8563245 -58104760 - L1PA15 LINE L1 -13 6152 3946 2758 26 0 0 chr20 8563245 8563556 -58104449 - AluYa5 SINE Alu 0 311 1 8699 181 19 17 chr20 8563556 8563932 -58104073 - L1PA15 LINE L1 -2219 3946 3572 405 293 141 30 chr20 8564135 8564337 -58103668 + L1ME4a LINE L1 5712 5890 -231 423 56 0 0 chr20 8564337 8564391 -58103614 + (TG)n Simple_repeat Simple_repeat 2 55 0 405 293 141 30 chr20 8564391 8564405 -58103600 + L1ME4a LINE L1 5890 5901 -220 2156 77 7 0 chr20 8564405 8564677 -58103328 + AluSx SINE Alu 39 312 0 405 293 141 30 chr20 8564677 8564763 -58103242 + L1ME4a LINE L1 5901 6049 -72 1496 182 31 11 chr20 8565098 8565384 -58102621 + AluJo SINE Alu 8 299 -13 1136 257 3 31 chr20 8565637 8565925 -58102080 + MLT1H LTR MaLR 39 318 -231 2272 118 0 0 chr20 8565973 8566279 -58101726 - AluSx SINE Alu -6 306 1 295 296 105 26 chr20 8566608 8566760 -58101245 + MIR SINE MIR 50 213 -49 591 282 95 41 chr20 8567413 8568002 -58100003 - HAL1b LINE L1 -9 1339 719 1168 242 106 56 chr20 8568071 8568168 -58099837 + L1MC4a LINE L1 5394 5485 -2323 360 0 0 0 chr20 8568168 8568208 -58099797 + (TTA)n Simple_repeat Simple_repeat 3 42 0 2660 48 0 12 chr20 8568208 8568542 -58099463 - L1PA7 LINE L1 -18 6136 5807 1168 242 106 56 chr20 8568542 8568906 -58099099 + L1MC4a LINE L1 5484 5879 -1929 229 197 28 14 chr20 8568943 8569014 -58098991 + (TA)n Simple_repeat Simple_repeat 1 72 0 396 278 73 59 chr20 8569156 8569429 -58098576 - HAL1b LINE L1 -632 716 440 852 287 97 18 chr20 8570046 8570436 -58097569 - LTR16B LTR ERVL -6 458 38 226 363 106 11 chr20 8570475 8570852 -58097153 + L2 LINE L2 2154 2566 -748 207 0 0 0 chr20 8571241 8571264 -58096741 + (TGG)n Simple_repeat Simple_repeat 1 23 0 299 226 303 9 chr20 8571664 8571773 -58096232 - MLT1I LTR MaLR -272 162 29 490 151 13 164 chr20 8572441 8572600 -58095405 - L1MA9 LINE L1 -323 5989 5855 429 223 0 36 chr20 8572667 8572779 -58095226 + L1MA9 LINE L1 6167 6274 -38 946 97 0 0 chr20 8574543 8574677 -58093328 - L1MA2 LINE L1 0 6304 6171 774 233 39 49 chr20 8574677 8574973 -58093032 - L1MC4 LINE L1 -7 8035 7741 617 261 187 11 chr20 8576513 8576815 -58091190 + L1ME4a LINE L1 5480 5835 -286 458 278 158 56 chr20 8577111 8577542 -58090463 + MLT1J LTR MaLR 3 477 -34 1056 164 15 5 chr20 8578691 8578886 -58089119 + MLT1A1 LTR MaLR 37 233 -132 1642 231 19 24 chr20 8578898 8579248 -58088757 - L1MC4a LINE L1 -62 7746 7397 1842 141 73 17 chr20 8579248 8579603 -58088402 - THE1C LTR MaLR 0 375 1 1642 231 19 24 chr20 8579603 8579677 -58088328 - L1MC4a LINE L1 -411 7397 7324 27 0 0 0 chr20 8580047 8580074 -58087931 + AT_rich Low_complexity Low_complexity 1 27 0 7870 46 3 0 chr20 8580074 8581805 -58086200 - L1PA5 LINE L1 -7 6147 4407 264 91 0 0 chr20 8582326 8582370 -58085635 + (CA)n Simple_repeat Simple_repeat 2 45 0 437 316 56 24 chr20 8582564 8582854 -58085151 - L1MC/D LINE L1 -394 5727 5511 669 290 32 9 chr20 8583219 8583440 -58084565 - MIR SINE MIR -32 230 5 311 318 16 0 chr20 8583440 8583569 -58084436 - L1MC/D LINE L1 -854 5292 5162 255 306 20 0 chr20 8583693 8583791 -58084214 - L1MC/D LINE L1 -1095 5051 4952 682 314 57 26 chr20 8583874 8584405 -58083600 - L1MC/D LINE L1 -1722 4424 3878 1761 145 14 3 chr20 8585476 8585773 -58082232 - AluSx SINE Alu -12 300 1 276 100 0 0 chr20 8586484 8586524 -58081481 + (CA)n Simple_repeat Simple_repeat 1 40 0 196 313 12 125 chr20 8586656 8586896 -58081109 - L2 LINE L2 -801 2513 2301 991 260 31 24 chr20 8587177 8587465 -58080540 + LTR16C LTR ERVL 202 491 0 1376 152 33 13 chr20 8587826 8588184 -58079821 + MSTB LTR MaLR 1 426 0 1014 224 112 58 chr20 8588712 8589328 -58078677 + L1MC5 LINE L1 7278 7926 -35 21 0 0 0 chr20 8589330 8589351 -58078654 + AT_rich Low_complexity Low_complexity 1 21 0 1660 191 3 13 chr20 8590974 8591278 -58076727 - AluJo SINE Alu -11 301 1 988 244 0 0 chr20 8593264 8593469 -58074536 - AluJo SINE Alu -40 272 68 1968 239 142 24 chr20 8593486 8594228 -58073777 - Charlie2a DNA MER1_type -566 2296 1468 942 260 226 28 chr20 8594338 8594803 -58073202 - Charlie2a DNA MER1_type -2267 595 39 209 305 53 53 chr20 8595809 8595940 -58072065 + MIR SINE MIR 21 151 -57 238 291 101 0 chr20 8596094 8596173 -58071832 - L1MC/D LINE L1 -531 5813 5727 284 292 142 35 chr20 8596833 8597059 -58070946 - L2 LINE L2 -337 2977 2728 180 0 0 0 chr20 8597074 8597094 -58070911 + (TGG)n Simple_repeat Simple_repeat 1 20 0 2299 162 47 0 chr20 8597589 8597997 -58070008 + MSTA LTR MaLR 1 427 -1 204 97 0 0 chr20 8599239 8599270 -58068735 + (TA)n Simple_repeat Simple_repeat 1 31 0 225 278 14 14 chr20 8599855 8599927 -58068078 + L3 LINE CR1 1070 1141 -436 2008 157 40 40 chr20 8601058 8601454 -58066551 + MSTD LTR MaLR 1 396 0 212 323 101 20 chr20 8601497 8601596 -58066409 - L2 LINE L2 0 3313 3207 414 200 70 0 chr20 8601711 8601811 -58066194 + Charlie2 DNA MER1_type 459 565 -2297 900 251 93 5 chr20 8601820 8602035 -58065970 + MIR SINE MIR 20 253 -9 1208 250 159 50 chr20 8602097 8602734 -58065271 + MER20B DNA MER1_type 2 707 -76 247 268 0 0 chr20 8603381 8603437 -58064568 + L2 LINE L2 3256 3311 -2 1878 200 57 11 chr20 8603764 8604204 -58063801 + MLT1C LTR MaLR 8 467 0 202 306 198 22 chr20 8604327 8604549 -58063456 + MIR SINE MIR 2 262 0 1095 279 77 31 chr20 8605378 8606175 -58061830 - L1MCa LINE L1 -4382 2225 1184 354 348 62 17 chr20 8607534 8607712 -58060293 + MIR SINE MIR 2 187 -75 916 191 39 85 chr20 8608011 8608341 -58059664 - L1ME3A LINE L1 -5 6165 5851 416 202 82 99 chr20 8608331 8608574 -58059431 - L1MC5 LINE L1 -27 7934 7696 * 215 61 30 0 chr20 8608659 8608692 -58059313 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 823 149 88 136 chr20 8610028 8610089 -58057916 - MER33 DNA MER1_type -2299 286 224 2185 108 0 3 chr20 8610089 8610385 -58057620 - AluSg SINE Alu -15 295 1 823 149 88 136 chr20 8610385 8610618 -58057387 - MER33 DNA MER1_type -2361 224 6 747 137 0 16 chr20 8611446 8611606 -58056399 + AluSc SINE Alu 170 327 0 968 139 46 109 chr20 8611903 8612141 -58055864 - AluJb SINE Alu -9 303 81 1945 159 46 3 chr20 8612164 8612555 -58055450 - L1MA5A LINE L1 -4 6293 5886 510 231 33 83 chr20 8612569 8612811 -58055194 - MER5C DNA MER1_type -52 272 43 1050 190 5 28 chr20 8612842 8613053 -58054952 - MER3 DNA MER1_type -3 206 1 257 299 0 0 chr20 8613069 8613136 -58054869 + MER5A DNA MER1_type 9 75 -114 1655 171 54 13 chr20 8613137 8613255 -58054750 + AluJo SINE Alu 1 113 -199 352 0 20 20 chr20 8613255 8613304 -58054701 + (TAAAA)n Simple_repeat Simple_repeat 5 53 0 1655 171 54 13 chr20 8613304 8613483 -58054522 + AluJo SINE Alu 113 310 -2 1344 131 13 97 chr20 8613657 8613955 -58054050 - L1MA4A LINE L1 -11 6292 6020 275 246 0 0 chr20 8613972 8614037 -58053968 - MER3 DNA MER1_type -2 207 143 648 242 24 12 chr20 8614059 8614224 -58053781 - MER3 DNA MER1_type -42 167 1 947 212 31 50 chr20 8614620 8614842 -58053163 - MER20 DNA MER1_type 0 219 2 896 206 0 0 chr20 8615459 8615624 -58052381 + FAM SINE Alu 1 165 -10 225 0 0 0 chr20 8615624 8615649 -58052356 + (GA)n Simple_repeat Simple_repeat 2 26 0 1406 229 51 88 chr20 8616941 8617512 -58050493 - L1ME3A LINE L1 -6 6164 5615 315 257 14 0 chr20 8617570 8617644 -58050361 - L1ME3A LINE L1 -535 5635 5561 207 100 0 0 chr20 8617695 8617725 -58050280 + (TAA)n Simple_repeat Simple_repeat 1 30 0 226 286 101 10 chr20 8618727 8618926 -58049079 + L1ME4a LINE L1 3764 3980 -2166 1693 193 0 7 chr20 8619650 8619935 -58048070 + AluJo SINE Alu 4 286 -26 29 0 0 0 chr20 8619935 8619964 -58048041 + AT_rich Low_complexity Low_complexity 1 29 0 551 296 85 38 chr20 8620239 8620794 -58047211 + L1ME4a LINE L1 5352 5932 -189 357 213 50 50 chr20 8620817 8620958 -58047047 + L1ME4a LINE L1 5980 6120 -1 193 320 60 40 chr20 8622350 8622550 -58045455 - L2 LINE L2 -1592 1722 1519 348 24 0 0 chr20 8623678 8623719 -58044286 + (CA)n Simple_repeat Simple_repeat 2 42 0 566 269 28 33 chr20 8623753 8624006 -58043999 - L1MC4a LINE L1 -541 5818 5644 209 315 34 48 chr20 8624950 8625096 -58042909 - MIR SINE MIR -10 252 109 262 387 16 0 chr20 8625197 8625321 -58042684 - L2 LINE L2 -220 3052 2927 1884 255 95 14 chr20 8627458 8628082 -58039923 + L1ME3 LINE L1 5440 6113 -49 21 0 0 0 chr20 8628401 8628422 -58039583 + AT_rich Low_complexity Low_complexity 1 21 0 464 322 87 26 chr20 8629176 8629406 -58038599 - MIR SINE MIR -16 246 3 1140 289 85 8 chr20 8629548 8629949 -58038056 - MLT1H LTR MaLR 0 549 118 181 133 0 0 chr20 8630577 8630607 -58037398 - MIR SINE MIR -120 142 113 207 320 31 82 chr20 8630914 8631011 -58036994 + MIR SINE MIR 11 102 -160 366 61 0 0 chr20 8631017 8631066 -58036939 + (CA)n Simple_repeat Simple_repeat 1 49 0 182 295 16 0 chr20 8631283 8631344 -58036661 + MIR SINE MIR 187 248 -14 988 275 62 17 chr20 8631409 8631792 -58036213 - LTR16A1 LTR ERVL 0 457 80 196 333 0 0 chr20 8634079 8634139 -58033866 - L2 LINE L2 -6 3307 3248 563 314 66 63 chr20 8634188 8634342 -58033663 - L2 LINE L2 -10 3262 3110 1776 190 19 27 chr20 8634342 8634710 -58033295 - MLT1A1 LTR MaLR 0 365 1 563 314 66 63 chr20 8634710 8634905 -58033100 - L2 LINE L2 -162 3110 2912 515 240 0 8 chr20 8636310 8636439 -58031566 - MER94 DNA DNA -3 131 4 291 325 130 20 chr20 8636439 8636639 -58031366 + LTR16C LTR ERVL 1 222 -269 581 247 65 0 chr20 8636663 8636833 -58031172 - L1M4 LINE L1 -1200 4946 4766 198 268 0 0 chr20 8636842 8636883 -58031122 - MER5B DNA MER1_type -135 43 3 2699 151 14 0 chr20 8637013 8637456 -58030549 - L1PA16 LINE L1 0 6166 5718 450 256 0 55 chr20 8638533 8638697 -58029308 - MER112 DNA MER1_type -6 254 100 2010 145 42 0 chr20 8639230 8639561 -58028444 + MER7A DNA MER2_type 4 346 0 1181 248 97 39 chr20 8639580 8640097 -58027908 - MLT1H LTR MaLR 0 549 3 616 348 82 0 chr20 8640869 8641102 -58026903 + MIR SINE MIR 1 252 -10 1332 227 145 10 chr20 8642205 8642606 -58025399 - L1ME1 LINE L1 -8 6158 5704 1543 210 3 0 chr20 8642733 8643024 -58024981 + AluSx SINE Alu 1 292 -20 1482 189 39 20 chr20 8643477 8643783 -58024222 - AluJo SINE Alu 0 312 1 1507 232 12 57 chr20 8644197 8644619 -58023386 + LTR16A1 LTR ERVL 49 451 -6 1804 115 0 90 chr20 8645454 8645789 -58022216 - AluSx SINE Alu 0 307 1 1258 160 34 147 chr20 8646057 8646444 -58021561 - MLT1A1 LTR MaLR -11 354 12 492 224 230 63 chr20 8646463 8646637 -58021368 + MIR SINE MIR 58 260 -2 7110 138 33 12 chr20 8646916 8648120 -58019885 - Tigger3b DNA MER2_type -1 1230 1 496 296 111 60 chr20 8648495 8648711 -58019294 + MIR SINE MIR 15 241 -21 373 263 125 80 chr20 8649510 8649799 -58018206 - MLT1H LTR MaLR 0 549 248 2279 110 7 0 chr20 8650155 8650463 -58017542 + AluSq SINE Alu 1 310 -3 1037 228 135 15 chr20 8650606 8651006 -58016999 + LTR16A1 LTR ERVL 10 457 0 1561 153 26 48 chr20 8651047 8651357 -58016648 - MER51A LTR ERV1 -81 553 155 225 0 0 0 chr20 8651358 8651383 -58016622 + (TTA)n Simple_repeat Simple_repeat 3 27 0 7075 40 1 7 chr20 8651383 8652250 -58015755 - L1PA5 LINE L1 -18 6136 5275 266 223 45 102 chr20 8652435 8652489 -58015516 + MIR SINE MIR 60 116 -146 2136 62 0 0 chr20 8652489 8652763 -58015242 - L1PA7 LINE L1 -6 6148 5875 266 223 45 102 chr20 8652763 8652865 -58015140 + MIR SINE MIR 116 207 -55 1269 251 87 39 chr20 8657605 8658328 -58009677 - HAL1b LINE L1 -59 1289 343 336 24 0 0 chr20 8658645 8658686 -58009319 + (TG)n Simple_repeat Simple_repeat 1 41 0 294 282 13 0 chr20 8659809 8659887 -58008118 + MIR SINE MIR 157 235 -27 647 12 12 0 chr20 8660307 8660387 -58007618 + (TTC)n Simple_repeat Simple_repeat 2 82 0 1415 96 0 0 chr20 8660387 8660595 -58007410 - AluSc SINE Alu 0 310 103 267 280 65 65 chr20 8660919 8661012 -58006993 + MER5A DNA MER1_type 14 106 -83 1093 252 136 29 chr20 8661132 8661648 -58006357 + L1MC4a LINE L1 5363 5933 -1875 441 98 54 0 chr20 8661654 8661766 -58006239 + (TA)n Simple_repeat Simple_repeat 2 119 0 717 294 73 45 chr20 8661827 8662358 -58005647 + L1ME3A LINE L1 5222 5769 -393 3230 169 96 3 chr20 8662386 8663031 -58004974 + L1MB4 LINE L1 5476 6180 0 813 221 70 120 chr20 8663022 8663448 -58004557 + L1ME3A LINE L1 5762 6166 -4 * 2330 88 3 0 chr20 8663452 8663749 -58004256 + AluSq SINE Alu 1 298 -15 25 0 0 0 chr20 8665379 8665404 -58002601 + AT_rich Low_complexity Low_complexity 1 25 0 577 240 139 50 chr20 8666263 8666521 -58001484 - MLT1J LTR MaLR -1 510 230 391 298 48 8 chr20 8666584 8666708 -58001297 - MLT1J LTR MaLR -380 131 3 27 81 0 0 chr20 8666820 8666882 -58001123 + AT_rich Low_complexity Low_complexity 1 62 0 208 67 0 44 chr20 8666945 8666990 -58001015 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 345 341 97 14 chr20 8667003 8667220 -58000785 - L1ME LINE L1 -478 5643 5409 774 196 0 0 chr20 8667854 8667987 -58000018 + FLAM_C SINE Alu 1 133 0 284 158 13 0 chr20 8668632 8668708 -57999297 + (TA)n Simple_repeat Simple_repeat 2 78 0 23 0 0 0 chr20 8668856 8668879 -57999126 + AT_rich Low_complexity Low_complexity 1 23 0 2125 122 3 0 chr20 8669443 8669737 -57998268 + AluSx SINE Alu 3 297 -15 25 51 0 0 chr20 8670613 8670652 -57997353 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr20 8670745 8670767 -57997238 + AT_rich Low_complexity Low_complexity 1 22 0 951 272 101 17 chr20 8671767 8672172 -57995833 - LTR16A1 LTR ERVL -18 439 1 439 220 120 65 chr20 8672212 8672412 -57995593 + L2 LINE L2 3099 3309 -4 207 297 0 54 chr20 8672600 8672674 -57995331 - MIR SINE MIR 0 262 193 455 258 172 7 chr20 8672676 8672827 -57995178 - MER5A DNA MER1_type 0 189 14 833 270 0 0 chr20 8672850 8673028 -57994977 - MIR SINE MIR -75 187 10 1080 269 109 16 chr20 8673641 8674090 -57993915 - LTR16C LTR ERVL 0 491 1 26 30 0 0 chr20 8674284 8674317 -57993688 + AT_rich Low_complexity Low_complexity 1 33 0 507 267 30 0 chr20 8675076 8675207 -57992798 - MIR SINE MIR -22 240 106 528 260 85 22 chr20 8675783 8676006 -57991999 + MIR SINE MIR 15 251 -11 575 293 18 0 chr20 8676119 8676283 -57991722 + MIR SINE MIR 60 226 -36 2909 205 83 20 chr20 8676472 8677170 -57990835 - Charlie1a DNA MER1_type -712 743 2 209 331 50 14 chr20 8677205 8677344 -57990661 - L2 LINE L2 -829 2485 2342 384 271 8 0 chr20 8677687 8677809 -57990196 + L1ME3 LINE L1 5391 5513 -651 321 274 0 0 chr20 8677861 8677978 -57990027 + (TA)n Simple_repeat Simple_repeat 1 117 0 740 287 99 18 chr20 8678079 8678462 -57989543 + L1ME3 LINE L1 5536 5949 -213 29 28 0 0 chr20 8678713 8678749 -57989256 + AT_rich Low_complexity Low_complexity 1 36 0 22 35 0 0 chr20 8678965 8678994 -57989011 + AT_rich Low_complexity Low_complexity 1 29 0 1539 165 15 11 chr20 8679110 8679370 -57988635 - AluJo SINE Alu -10 302 42 236 308 0 22 chr20 8680423 8680514 -57987491 - L1MC4 LINE L1 -1340 6702 6614 321 276 0 0 chr20 8680523 8680646 -57987359 + (TA)n Simple_repeat Simple_repeat 1 123 0 1669 193 7 0 chr20 8681413 8681709 -57986296 + AluJo SINE Alu 1 298 -14 22 35 0 0 chr20 8681876 8681905 -57986100 + AT_rich Low_complexity Low_complexity 1 29 0 226 77 0 103 chr20 8682352 8682391 -57985614 - HSMAR1 DNA Mariner 0 1287 1253 222 37 0 0 chr20 8682421 8682448 -57985557 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 195 100 0 0 chr20 8682791 8682821 -57985184 + (CA)n Simple_repeat Simple_repeat 1 30 0 564 327 71 40 chr20 8682825 8683247 -57984758 + L2 LINE L2 2136 2570 -744 678 303 126 39 chr20 8683417 8683829 -57984176 - MLT1H LTR MaLR -100 449 2 1031 32 0 0 chr20 8683939 8684065 -57983940 - L1PA4 LINE L1 0 6155 6030 326 248 50 59 chr20 8684098 8684199 -57983806 + L2 LINE L2 3156 3255 -17 253 289 56 0 chr20 8685105 8685195 -57982810 + L1ME2 LINE L1 5579 5673 -448 823 325 13 0 chr20 8685262 8685499 -57982506 + MIR SINE MIR 12 251 -11 30 0 0 0 chr20 8686106 8686136 -57981869 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr20 8686243 8686264 -57981741 + AT_rich Low_complexity Low_complexity 1 21 0 610 345 37 34 chr20 8687644 8688024 -57979981 - L3 LINE CR1 -17 1560 1180 639 187 120 0 chr20 8688100 8688250 -57979755 - MIR SINE MIR -3 259 92 306 379 33 0 chr20 8689890 8690043 -57977962 + MIR SINE MIR 88 245 -17 2256 84 0 7 chr20 8691037 8691345 -57976660 + AluSx SINE Alu 1 306 0 666 226 60 93 chr20 8691623 8691733 -57976272 - MIR SINE MIR -2 260 148 2307 98 0 7 chr20 8691733 8692040 -57975965 + AluSx SINE Alu 1 305 -7 666 226 60 93 chr20 8692040 8692177 -57975828 - MIR SINE MIR -114 148 21 26 0 0 0 chr20 8692212 8692238 -57975767 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr20 8692314 8692342 -57975663 + AT_rich Low_complexity Low_complexity 1 28 0 204 288 100 12 chr20 8692449 8692529 -57975476 - MIR3 SINE MIR -3 205 119 931 204 23 42 chr20 8693711 8693975 -57974030 + L1ME2 LINE L1 5792 6050 -114 1941 141 161 12 chr20 8693999 8694404 -57973601 - L1PA16 LINE L1 -1 6165 5701 456 195 0 2 chr20 8694396 8694492 -57973513 - L1M4 LINE L1 -611 5563 5469 * 393 237 51 0 chr20 8694494 8694612 -57973393 + L1ME2 LINE L1 6040 6163 -1 322 282 16 85 chr20 8695439 8695627 -57972378 + LTR16A1 LTR ERVL 2 176 -281 256 196 0 0 chr20 8695724 8695770 -57972235 + LTR16A1 LTR ERVL 245 290 -167 426 188 152 25 chr20 8696582 8696830 -57971175 - MLT1H LTR MaLR -13 536 207 358 324 22 7 chr20 8697528 8697667 -57970338 + MER117 DNA MER1_type 21 161 -36 749 230 86 19 chr20 8697878 8698087 -57969918 + MIR SINE MIR 40 262 0 1546 262 180 5 chr20 8698298 8698859 -57969146 - MLT2F LTR ERVL -4 659 1 385 298 85 48 chr20 8698875 8699063 -57968942 + MIR3 SINE MIR 9 203 -5 584 316 73 9 chr20 8699868 8700086 -57967919 + LTR16A LTR ERVL 207 438 -12 24 0 0 0 chr20 8700290 8700314 -57967691 + AT_rich Low_complexity Low_complexity 1 24 0 240 35 0 0 chr20 8700460 8700489 -57967516 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 515 196 0 0 chr20 8700641 8700738 -57967267 - MER5A DNA MER1_type -5 184 88 329 297 71 32 chr20 8700752 8700907 -57967098 + L2 LINE L2 3110 3270 -2 409 268 10 0 chr20 8701911 8702008 -57965997 + L2 LINE L2 3169 3266 -6 626 200 101 101 chr20 8702578 8702976 -57965029 - MLT1H LTR MaLR 0 549 86 1285 65 12 0 chr20 8703235 8703405 -57964600 + L1PA4 LINE L1 5981 6152 -3 543 333 26 4 chr20 8703712 8703943 -57964062 - MIR SINE MIR -26 236 1 555 225 12 23 chr20 8704187 8704448 -57963557 + GA-rich Low_complexity Low_complexity 1 257 0 909 316 80 29 chr20 8705212 8705665 -57962340 + LTR16C LTR ERVL 3 478 -13 875 253 192 47 chr20 8706658 8707164 -57960841 - MLT1G LTR MaLR 0 590 12 369 0 0 0 chr20 8707598 8707639 -57960366 + (TG)n Simple_repeat Simple_repeat 1 41 0 294 242 0 0 chr20 8708197 8708263 -57959742 + LTR16C LTR ERVL 426 491 0 22 0 0 0 chr20 8708781 8708803 -57959202 + AT_rich Low_complexity Low_complexity 1 22 0 592 263 126 10 chr20 8708930 8709128 -57958877 - MIR SINE MIR -22 240 20 670 292 123 42 chr20 8710256 8710285 -57957720 - MLT1J LTR MaLR -45 466 441 1927 167 0 0 chr20 8710285 8710584 -57957421 - AluJb SINE Alu -13 299 1 670 292 123 42 chr20 8710584 8710985 -57957020 - MLT1J LTR MaLR -70 441 1 214 229 34 8 chr20 8711260 8711378 -57956627 + (TA)n Simple_repeat Simple_repeat 1 121 0 1371 137 49 4 chr20 8711401 8711627 -57956378 - MER46A DNA MER2_type 0 236 1 33 66 0 0 chr20 8711974 8712035 -57955970 + AT_rich Low_complexity Low_complexity 1 61 0 724 174 8 0 chr20 8712719 8712851 -57955154 - FLAM_C SINE Alu 0 133 1 183 42 0 0 chr20 8712897 8712921 -57955084 + (TTTG)n Simple_repeat Simple_repeat 3 26 0 766 283 22 9 chr20 8713556 8713782 -57954223 - MIR SINE MIR 0 262 34 249 222 16 0 chr20 8714372 8714435 -57953570 - MER116 DNA Mariner -2 78 15 206 237 0 0 chr20 8715370 8715408 -57952597 + MIR SINE MIR 108 145 -63 760 284 84 9 chr20 8715884 8716099 -57951906 - MIR SINE MIR -31 231 1 627 246 161 42 chr20 8716340 8716726 -57951279 + MLT1J2 LTR MaLR 1 432 -18 1040 215 9 27 chr20 8716875 8717098 -57950907 + MER20 DNA MER1_type 1 219 0 2411 90 3 0 chr20 8717326 8717638 -57950367 + AluSp SINE Alu 1 313 0 399 341 43 12 chr20 8717673 8717837 -57950168 + MIR SINE MIR 84 252 -10 384 243 271 0 chr20 8719898 8720042 -57947963 - MER5A DNA MER1_type 0 189 7 181 299 117 13 chr20 8720066 8720143 -57947862 + L3 LINE CR1 1484 1568 -9 779 318 19 19 chr20 8720506 8720767 -57947238 - MIR SINE MIR 0 262 2 28 29 0 0 chr20 8721559 8721594 -57946411 + AT_rich Low_complexity Low_complexity 1 35 0 2153 225 40 41 chr20 8722040 8722671 -57945334 - L1ME2 LINE L1 -10 6154 5525 462 311 33 22 chr20 8723112 8723221 -57944784 + MIR SINE MIR 67 180 -82 761 210 45 19 chr20 8723221 8723378 -57944627 + FRAM SINE Alu 1 161 -5 462 311 33 22 chr20 8723378 8723448 -57944557 + MIR SINE MIR 180 248 -14 2645 19 0 7 chr20 8723812 8724122 -57943883 - AluY SINE Alu -3 308 1 295 275 117 85 chr20 8724604 8725105 -57942900 + L2 LINE L2 1739 3167 -146 620 320 81 13 chr20 8725154 8725388 -57942617 - MIR SINE MIR 0 262 13 458 273 167 13 chr20 8726517 8726667 -57941338 - MER5A DNA MER1_type -6 183 11 830 209 6 0 chr20 8726708 8726871 -57941134 - MER5A DNA MER1_type -23 166 3 557 159 39 154 chr20 8728957 8729139 -57938866 - MER20 DNA MER1_type -58 161 1 1034 62 0 0 chr20 8731265 8731393 -57936612 + AluY SINE Alu 177 304 -7 965 296 33 13 chr20 8731750 8732148 -57935857 + MLT1J LTR MaLR 106 511 0 312 269 0 32 chr20 8732396 8732489 -57935516 - L1MC4 LINE L1 -1339 6703 6614 10506 204 58 24 chr20 8733295 8733475 -57934530 + L1MC3 LINE L1 4181 4353 -3432 4406 105 9 3 chr20 8733475 8734121 -57933884 - L1PA11 LINE L1 -1 6173 5524 10506 204 58 24 chr20 8734121 8737424 -57930581 + L1MC3 LINE L1 4353 7785 0 1008 167 23 23 chr20 8737446 8737662 -57930343 + L1MB3 LINE L1 5965 6180 -3 212 218 126 23 chr20 8738114 8738201 -57929804 - MIR SINE MIR -35 227 132 337 277 59 0 chr20 8738431 8738538 -57929467 + MIR SINE MIR 38 155 -62 452 321 24 18 chr20 8738689 8738857 -57929148 - MLT1J2 LTR MaLR -29 421 253 1040 201 5 5 chr20 8739678 8739867 -57928138 - MER5A DNA MER1_type 0 189 1 823 153 0 8 chr20 8740932 8741063 -57926942 + FLAM_C SINE Alu 1 130 -3 2179 92 3 10 chr20 8741653 8741948 -57926057 - AluSx SINE Alu -18 294 2 208 163 0 23 chr20 8741967 8742010 -57925995 + CT-rich Low_complexity Low_complexity 4 45 0 637 280 43 10 chr20 8743353 8743560 -57924445 - LTR16A1 LTR ERVL -13 444 231 815 198 43 32 chr20 8744813 8745000 -57923005 - MER5A DNA MER1_type 0 189 1 249 216 0 0 chr20 8746331 8746382 -57921623 + MIR SINE MIR 87 137 -71 2069 174 155 54 chr20 8746565 8747157 -57920848 - MLT1E1 LTR MaLR 0 654 3 302 250 73 10 chr20 8747226 8747322 -57920683 + MIR SINE MIR 105 206 -56 207 351 18 35 chr20 8748573 8748687 -57919318 - MIR SINE MIR -67 141 30 883 222 5 11 chr20 8750698 8750887 -57917118 + MER5A DNA MER1_type 2 189 0 300 354 31 15 chr20 8750907 8751037 -57916968 - MIR3 SINE MIR -63 145 14 2114 145 3 0 chr20 8751644 8751955 -57916050 + AluSx SINE Alu 1 312 0 237 309 82 18 chr20 8752409 8752519 -57915486 + L2 LINE L2 3197 3313 0 30 0 0 0 chr20 8755845 8755875 -57912130 + AT_rich Low_complexity Low_complexity 1 30 0 309 283 101 50 chr20 8756700 8756856 -57911149 + MIR SINE MIR 53 216 -46 487 231 98 69 chr20 8756856 8757029 -57910976 - MER5B DNA MER1_type 0 178 1 2071 114 46 32 chr20 8757474 8757843 -57910162 + THE1C LTR MaLR 1 374 -1 463 245 94 38 chr20 8758753 8758965 -57909040 - MER112 DNA MER1_type -7 253 30 251 274 120 8 chr20 8759075 8759192 -57908813 + MIR3 SINE MIR 43 172 -36 189 0 0 0 chr20 8759342 8759363 -57908642 + (A)n Simple_repeat Simple_repeat 1 21 0 349 236 34 11 chr20 8759892 8759981 -57908024 - L2 LINE L2 -21 3292 3202 511 272 46 41 chr20 8760002 8760045 -57907960 + MER63A DNA MER1_type 8 49 -1639 2535 68 0 0 chr20 8760045 8760354 -57907651 + AluY SINE Alu 1 309 -2 511 272 46 41 chr20 8760354 8760505 -57907500 + MER63A DNA MER1_type 49 203 -7 1899 286 116 18 chr20 8760523 8761450 -57906555 - L2 LINE L2 -168 3145 2070 1137 152 4 8 chr20 8761451 8761695 -57906310 + L1MB3 LINE L1 5641 5932 -251 3374 151 29 43 chr20 8761695 8762344 -57905661 - Tigger1 DNA MER2_type 0 2418 1779 26448 130 11 20 chr20 8762376 8765672 -57902333 - L1PA8A LINE L1 -6 6440 3116 2192 76 0 4 chr20 8765672 8765947 -57902058 - AluY SINE Alu -3 308 35 2148 95 10 17 chr20 8765949 8766245 -57901760 - AluY SINE Alu -17 294 1 26448 130 11 20 chr20 8766245 8769365 -57898640 - L1PA8A LINE L1 -3331 3115 7 11234 125 27 12 chr20 8769365 8771137 -57896868 - Tigger1 DNA MER2_type -619 1799 2 1471 108 47 0 chr20 8771137 8771369 -57896636 + L1MB3 LINE L1 5930 6172 -11 26 0 0 0 chr20 8771369 8771395 -57896610 + AT_rich Low_complexity Low_complexity 1 26 0 353 252 50 25 chr20 8771395 8771514 -57896491 - L2 LINE L2 -1230 2084 1963 189 107 0 0 chr20 8772150 8772178 -57895827 + (TG)n Simple_repeat Simple_repeat 1 28 0 682 212 27 65 chr20 8773137 8773321 -57894684 + MER5B DNA MER1_type 1 177 -1 1939 178 26 18 chr20 8773501 8773888 -57894117 - MLT1B LTR MaLR 0 390 1 520 340 72 0 chr20 8774181 8774390 -57893615 + MIR SINE MIR 8 231 -31 561 99 0 0 chr20 8775162 8775243 -57892762 + (TA)n Simple_repeat Simple_repeat 1 81 0 1242 188 33 112 chr20 8775463 8775857 -57892148 + MLT1A1 LTR MaLR 3 365 0 207 381 59 17 chr20 8775857 8775975 -57892030 + MIR3 SINE MIR 49 171 -37 1219 165 99 29 chr20 8776793 8777035 -57890970 + AluJo SINE Alu 6 264 -48 346 145 246 0 chr20 8777035 8777104 -57890901 + MER103 DNA DNA 8 93 -73 429 316 60 0 chr20 8777911 8778044 -57889961 + MIR SINE MIR 63 203 -59 326 335 78 35 chr20 8780188 8780445 -57887560 - L1ME4a LINE L1 -237 5884 5617 940 280 113 72 chr20 8780449 8781607 -57886398 - L1MC4a LINE L1 -1239 6569 5365 354 242 16 16 chr20 8781609 8781737 -57886268 + (TA)n Simple_repeat Simple_repeat 2 129 0 1593 172 35 38 chr20 8781774 8782140 -57885865 - MLT1A1 LTR MaLR 0 365 1 514 284 41 99 chr20 8782170 8782655 -57885350 - L1MC4a LINE L1 -824 5322 4866 990 299 61 45 chr20 8784043 8784604 -57883401 - L1MC4a LINE L1 -1923 5885 5316 494 337 136 47 chr20 8784820 8784920 -57883085 - L1MC4a LINE L1 -1088 5058 4968 499 271 96 66 chr20 8784920 8785315 -57882690 - MLT1I LTR MaLR -2 407 1 494 337 136 47 chr20 8785315 8785951 -57882054 - L1MC4a LINE L1 -1178 4968 4237 2348 69 0 44 chr20 8785951 8786271 -57881734 + AluY SINE Alu 1 306 -5 494 337 136 47 chr20 8786271 8786366 -57881639 - L1MC4a LINE L1 -1909 4237 4152 747 201 12 35 chr20 8786632 8786801 -57881204 + FRAM SINE Alu 1 165 -1 715 177 0 0 chr20 8787011 8787124 -57880881 + AluJb SINE Alu 136 248 -64 222 359 90 21 chr20 8787609 8787754 -57880251 + MIR3 SINE MIR 33 187 -21 1349 216 102 94 chr20 8788472 8788994 -57879011 - MLT1H LTR MaLR -23 526 1 1297 193 101 26 chr20 8789113 8789460 -57878545 - MER63B DNA MER1_type -63 373 1 246 245 0 0 chr20 8790466 8790519 -57877486 + L1MD3 LINE L1 6517 6569 -1426 22 35 0 0 chr20 8790548 8790577 -57877428 + AT_rich Low_complexity Low_complexity 1 29 0 3105 184 27 32 chr20 8790590 8790763 -57877242 + L1MC3 LINE L1 7060 7232 -553 2646 96 3 0 chr20 8790763 8791117 -57876888 - THE1A LTR MaLR 0 355 1 3105 184 27 32 chr20 8791117 8791637 -57876368 + L1MC3 LINE L1 7232 7750 -35 752 186 60 36 chr20 8791668 8791869 -57876136 + FAM SINE Alu 1 72 0 266 308 19 56 chr20 8792094 8792201 -57875804 + MIR3 SINE MIR 10 112 -96 2229 108 0 0 chr20 8792835 8793161 -57874844 - AluSq SINE Alu 0 326 1 308 162 86 38 chr20 8793197 8793302 -57874703 - L2 LINE L2 -126 3187 3078 1199 258 118 9 chr20 8793430 8793864 -57874141 - L1ME3A LINE L1 -238 5932 5452 39 0 0 0 chr20 8793891 8793930 -57874075 + AT_rich Low_complexity Low_complexity 1 39 0 22 56 0 0 chr20 8794023 8794059 -57873946 + AT_rich Low_complexity Low_complexity 1 36 0 1225 222 109 50 chr20 8794059 8794500 -57873505 + MLT1C LTR MaLR 1 467 0 1107 214 18 14 chr20 8794560 8794835 -57873170 + MER33 DNA MER1_type 48 323 -1 2094 122 7 7 chr20 8795140 8795444 -57872561 + AluSq SINE Alu 1 304 -9 248 282 94 12 chr20 8796002 8796087 -57871918 + MIR SINE MIR 100 191 -71 276 254 130 7 chr20 8796227 8796365 -57871640 + L1ME4a LINE L1 5967 6121 0 21 0 0 0 chr20 8796589 8796610 -57871395 + AT_rich Low_complexity Low_complexity 1 21 0 947 189 68 0 chr20 8798049 8798239 -57869766 + MER3 DNA MER1_type 6 208 -1 312 195 293 0 chr20 8798269 8798351 -57869654 + MER5A DNA MER1_type 49 154 -35 588 309 10 14 chr20 8798833 8799040 -57868965 - LTR16C LTR ERVL -1 490 285 369 0 0 0 chr20 8800328 8800369 -57867636 + (CA)n Simple_repeat Simple_repeat 2 42 0 261 0 0 0 chr20 8800391 8800425 -57867580 + (CA)n Simple_repeat Simple_repeat 1 63 0 261 0 0 0 chr20 8800425 8800454 -57867551 + (CA)n Simple_repeat Simple_repeat 2 30 0 1794 69 0 0 chr20 8800473 8800689 -57867316 - AluY SINE Alu 0 311 96 236 279 38 0 chr20 8800716 8800795 -57867210 + (TA)n Simple_repeat Simple_repeat 1 82 0 496 322 62 9 chr20 8801318 8801529 -57866476 + MLT2F LTR ERVL 196 417 -246 284 288 0 0 chr20 8801511 8801577 -57866428 + MLT2E LTR ERVL 202 267 -361 * 254 264 46 0 chr20 8801632 8801719 -57866286 + MLT2E LTR ERVL 519 609 -19 29 70 0 0 chr20 8801967 8802024 -57865981 + AT_rich Low_complexity Low_complexity 1 57 0 23 68 0 0 chr20 8802047 8802091 -57865914 + AT_rich Low_complexity Low_complexity 1 44 0 1994 179 6 8 chr20 8802787 8803150 -57864855 + MER47A DNA MER2_type 4 365 -1 226 301 55 0 chr20 8803514 8803587 -57864418 + MIR SINE MIR 118 194 -68 1230 206 41 4 chr20 8803796 8804039 -57863966 - L1PA16 LINE L1 -23 6143 5892 493 232 58 0 chr20 8804917 8805055 -57862950 - MER103 DNA DNA -13 153 8 541 268 159 19 chr20 8805139 8805296 -57862709 + MER5A DNA MER1_type 9 187 -2 302 214 22 0 chr20 8805892 8805981 -57862024 + L1MA10 LINE L1 6230 6320 -14 698 295 69 9 chr20 8806194 8806428 -57861577 + MIR SINE MIR 2 252 -10 444 250 88 54 chr20 8806489 8806693 -57861312 + L2 LINE L2 3103 3313 0 2479 122 98 166 chr20 8808146 8808816 -57859189 - MER51A LTR ERV1 -9 625 1 240 246 134 60 chr20 8808829 8808963 -57859042 - MER5A DNA MER1_type -37 152 9 195 129 0 0 chr20 8809019 8809050 -57858955 + (A)n Simple_repeat Simple_repeat 1 31 0 927 239 29 11 chr20 8809943 8810215 -57857790 + L1MA9 LINE L1 5998 6274 -38 1844 148 25 0 chr20 8810333 8810611 -57857394 - AluSx SINE Alu -27 285 1 3416 123 65 9 chr20 8810909 8811480 -57856525 - LTR26 LTR ERV1 0 603 1 2225 123 0 0 chr20 8811619 8811920 -57856085 - AluSx SINE Alu -11 301 1 1831 147 0 26 chr20 8814082 8814389 -57853616 + AluJo SINE Alu 13 311 -1 29 84 0 0 chr20 8814435 8814506 -57853499 + AT_rich Low_complexity Low_complexity 1 71 0 189 196 0 0 chr20 8814782 8814828 -57853177 + GA-rich Low_complexity Low_complexity 4 49 0 401 304 7 0 chr20 8814882 8815017 -57852988 - MER46C DNA MER2_type -202 136 1 763 223 82 89 chr20 8815236 8815468 -57852537 - MLT1B LTR MaLR 0 390 158 2049 121 42 3 chr20 8815468 8815798 -57852207 - MER61A LTR ERV1 0 343 1 763 223 82 89 chr20 8815798 8815819 -57852186 - MLT1B LTR MaLR -232 158 138 207 69 0 0 chr20 8815819 8815848 -57852157 + (CCTAT)n Simple_repeat Simple_repeat 4 32 0 763 223 82 89 chr20 8815848 8815965 -57852040 - MLT1B LTR MaLR -252 138 1 526 296 40 0 chr20 8816909 8817085 -57850920 + MIR SINE MIR 68 250 -12 375 60 0 0 chr20 8817094 8817144 -57850861 + (TCC)n Simple_repeat Simple_repeat 2 51 0 200 313 92 15 chr20 8817654 8817785 -57850220 - L2 LINE L2 -5 3308 3168 365 313 17 0 chr20 8817808 8817923 -57850082 + L2 LINE L2 3193 3309 -4 318 250 177 0 chr20 8818066 8818162 -57849843 - MIR SINE MIR -138 124 12 1187 223 101 78 chr20 8818637 8819162 -57848843 + MLT1E1 LTR MaLR 1 537 -117 1634 120 79 41 chr20 8819454 8819745 -57848260 + AluSx SINE Alu 1 302 -10 225 140 20 40 chr20 8819931 8819981 -57848024 + CT-rich Low_complexity Low_complexity 1 49 0 383 314 50 69 chr20 8820021 8820176 -57847829 - MLT1K LTR MaLR -239 349 197 2156 128 0 0 chr20 8820176 8820487 -57847518 - AluSx SINE Alu 0 311 1 383 314 50 69 chr20 8820487 8820590 -57847415 - MLT1K LTR MaLR -391 197 94 22 94 0 0 chr20 8821392 8821456 -57846549 + AT_rich Low_complexity Low_complexity 1 64 0 354 294 58 34 chr20 8821566 8821978 -57846027 + L1M4 LINE L1 4877 5298 -848 1831 111 0 32 chr20 8824035 8824350 -57843655 + L1MA5A LINE L1 5990 6294 -3 1026 233 34 48 chr20 8825588 8825940 -57842065 - MLT1A1 LTR MaLR 0 365 19 2284 115 0 6 chr20 8826365 8826677 -57841328 - AluSg SINE Alu 0 310 1 386 301 90 46 chr20 8826953 8827317 -57840688 + LTR33 LTR ERVL 32 390 -133 8952 43 3 0 chr20 8827443 8829326 -57838679 - L1PA5 LINE L1 -6 6148 4272 5827 45 3 5 chr20 8829327 8830088 -57837917 + L1PA5 LINE L1 3512 4270 -1876 187 396 7 22 chr20 8830249 8830388 -57837617 + L3 LINE CR1 646 782 -795 225 299 189 8 chr20 8830471 8830598 -57837407 + L3 LINE CR1 945 1094 -483 194 258 136 68 chr20 8830627 8830759 -57837246 + MIR SINE MIR 4 144 -118 646 314 113 23 chr20 8830855 8831199 -57836806 + L3 LINE CR1 1136 1510 -67 264 286 0 0 chr20 8832295 8832358 -57835647 + MIR3 SINE MIR 144 206 -2 197 227 0 0 chr20 8832611 8832655 -57835350 - MIR SINE MIR -101 161 118 450 296 39 45 chr20 8832929 8833240 -57834765 + LTR16C LTR ERVL 181 489 -2 2198 118 0 7 chr20 8834743 8835047 -57832958 - AluSx SINE Alu -10 302 1 219 182 23 0 chr20 8835093 8835137 -57832868 + CT-rich Low_complexity Low_complexity 4 48 0 294 252 7 14 chr20 8835170 8835309 -57832696 + CT-rich Low_complexity Low_complexity 3 140 0 210 329 52 118 chr20 8835873 8836220 -57831785 - L2 LINE L2 -14 3258 2935 426 294 89 20 chr20 8836736 8836882 -57831123 + MIR SINE MIR 30 185 -77 782 287 181 15 chr20 8836882 8837208 -57830797 - L2 LINE L2 -5 3308 3037 1860 178 31 31 chr20 8837208 8837596 -57830409 + MLT1B LTR MaLR 1 388 -2 782 287 181 15 chr20 8837596 8838027 -57829978 - L2 LINE L2 -276 3037 2418 693 278 126 25 chr20 8838050 8838367 -57829638 + L2 LINE L2 2957 3305 -8 198 103 0 0 chr20 8838373 8838402 -57829603 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 2167 105 17 0 chr20 8838448 8838742 -57829263 + AluSp SINE Alu 1 299 -14 1806 56 0 0 chr20 8838830 8839045 -57828960 - AluY SINE Alu -4 307 93 23 33 0 0 chr20 8839953 8839983 -57828022 + AT_rich Low_complexity Low_complexity 1 30 0 1691 163 15 24 chr20 8840052 8840389 -57827616 - MLT1A1 LTR MaLR -15 350 17 21 0 0 0 chr20 8840982 8841003 -57827002 + AT_rich Low_complexity Low_complexity 1 21 0 327 49 0 0 chr20 8841112 8841153 -57826852 + (CA)n Simple_repeat Simple_repeat 1 41 0 1363 214 69 6 chr20 8841298 8841731 -57826274 - MER89 LTR ERV1 0 559 1 336 239 137 43 chr20 8844185 8844302 -57823703 - MER5A DNA MER1_type -53 136 9 911 148 18 6 chr20 8844318 8844487 -57823518 + MER3 DNA MER1_type 1 124 -85 421 242 37 99 chr20 8844726 8844887 -57823118 + MIR SINE MIR 29 179 -83 348 218 0 0 chr20 8845440 8845527 -57822478 + (TA)n Simple_repeat Simple_repeat 1 87 0 244 259 0 0 chr20 8845590 8845644 -57822361 - MIR SINE MIR -32 230 177 21 0 0 0 chr20 8846383 8846404 -57821601 + AT_rich Low_complexity Low_complexity 1 21 0 423 38 0 0 chr20 8846544 8846597 -57821408 + (TG)n Simple_repeat Simple_repeat 1 53 0 489 338 80 27 chr20 8847267 8847669 -57820336 - L1MEc LINE L1 -4584 1726 1304 303 314 112 12 chr20 8847676 8847934 -57820071 - L1MEc LINE L1 -4866 1253 970 617 238 69 61 chr20 8847944 8848304 -57819701 + LTR18B LTR ERVL 1 614 0 627 317 139 62 chr20 8848306 8849004 -57819001 - L1MEc LINE L1 -5158 961 210 7071 14 1 0 chr20 8849080 8849884 -57818121 + L1PA3 LINE L1 5351 6155 0 579 297 238 7 chr20 8849946 8850330 -57817675 - L3 LINE CR1 -603 974 468 2079 143 16 3 chr20 8850330 8850638 -57817367 - AluSx SINE Alu 0 312 1 579 297 238 7 chr20 8850638 8850707 -57817298 - L3 LINE CR1 -1109 468 416 1228 236 8 32 chr20 8851358 8851727 -57816278 + L1ME3 LINE L1 5802 6161 -1 215 233 78 112 chr20 8851849 8851965 -57816040 + MIR SINE MIR 119 230 -32 426 325 25 12 chr20 8852161 8852321 -57815684 - MIR SINE MIR -56 206 45 595 185 122 27 chr20 8852336 8852492 -57815513 - MER5A DNA MER1_type -9 180 4 3620 181 37 10 chr20 8853149 8853928 -57814077 - L1MB8 LINE L1 0 6178 5379 1093 167 93 0 chr20 8853938 8854142 -57813863 - AluJb SINE Alu -7 305 83 257 191 17 0 chr20 8854142 8854232 -57813773 - L1MB8 LINE L1 -809 5369 5276 200 119 0 24 chr20 8854254 8854296 -57813709 + (TTTTG)n Simple_repeat Simple_repeat 4 44 0 761 191 8 0 chr20 8855961 8856087 -57811918 + FLAM_A SINE Alu 1 127 -6 639 296 138 27 chr20 8856222 8856593 -57811412 - MLT1J2 LTR MaLR -18 432 21 715 277 190 33 chr20 8857527 8857988 -57810017 - L2 LINE L2 -1 3312 2784 375 41 0 0 chr20 8858397 8858446 -57809559 + (CA)n Simple_repeat Simple_repeat 1 49 0 752 180 0 0 chr20 8858702 8858824 -57809181 + FLAM_A SINE Alu 1 122 -11 390 226 57 19 chr20 8858849 8858955 -57809050 - MIR SINE MIR -79 183 74 338 208 65 0 chr20 8859364 8859441 -57808564 - MER5A DNA MER1_type -83 106 25 279 349 171 7 chr20 8860003 8860149 -57807856 - MER5A DNA MER1_type -6 183 14 357 352 31 0 chr20 8860405 8860533 -57807472 + MER5B DNA MER1_type 2 133 -45 292 272 328 0 chr20 8860521 8860646 -57807359 + MER5A DNA MER1_type 17 182 -7 * 2179 182 36 19 chr20 8860892 8861310 -57806695 - MSTB LTR MaLR 0 426 2 195 379 0 0 chr20 8861563 8861629 -57806376 - L2 LINE L2 -14 3299 3234 193 343 61 20 chr20 8861788 8861887 -57806118 - L2 LINE L2 -238 3034 2932 22 35 0 0 chr20 8861887 8861916 -57806089 + AT_rich Low_complexity Low_complexity 1 29 0 24 32 0 0 chr20 8862649 8862680 -57805325 + AT_rich Low_complexity Low_complexity 1 31 0 1622 145 30 7 chr20 8864227 8864496 -57803509 + AluSx SINE Alu 1 275 -37 2374 104 0 0 chr20 8865490 8865799 -57802206 - AluSc SINE Alu 0 309 1 357 250 91 122 chr20 8867346 8867424 -57800581 + L2 LINE L2 2910 2989 -324 2201 121 3 0 chr20 8867424 8867722 -57800283 - AluSp SINE Alu -14 299 1 357 250 91 122 chr20 8867722 8867751 -57800254 + L2 LINE L2 2989 3017 -296 1893 120 52 3 chr20 8867751 8868042 -57799963 - AluSx SINE Alu -4 308 4 357 250 91 122 chr20 8868042 8868285 -57799720 + L2 LINE L2 3017 3250 -63 180 288 136 15 chr20 8869163 8869229 -57798776 + MER5A DNA MER1_type 42 115 -74 2392 103 33 11 chr20 8869268 8869635 -57798370 - THE1C LTR MaLR 0 375 1 2892 6 0 0 chr20 8869879 8870192 -57797813 - AluYb8 SINE Alu -5 313 1 180 158 0 0 chr20 8870501 8870539 -57797466 + (TG)n Simple_repeat Simple_repeat 2 39 0 294 231 26 0 chr20 8871292 8871370 -57796635 + LTR16A1 LTR ERVL 159 238 -219 660 205 84 0 chr20 8871716 8871882 -57796123 + LTR16A1 LTR ERVL 270 449 -8 343 258 70 37 chr20 8873566 8873801 -57794204 + MLT1I LTR MaLR 90 384 -25 1269 210 52 12 chr20 8873852 8874242 -57793763 - L1MC/D LINE L1 -569 5833 5509 351 181 0 0 chr20 8874247 8874319 -57793686 + (TA)n Simple_repeat Simple_repeat 2 73 0 679 215 55 36 chr20 8874341 8874615 -57793390 - L1MC/D LINE L1 -880 5502 5224 518 181 26 0 chr20 8874602 8874718 -57793287 - L1MC/D LINE L1 -1598 4784 4666 * 264 241 35 51 chr20 8874719 8874847 -57793158 - L1MDa LINE L1 -4897 1485 1283 1063 236 55 89 chr20 8874985 8875425 -57792580 - L1MDa LINE L1 -5935 628 204 210 37 0 0 chr20 8875868 8875895 -57792110 + (TG)n Simple_repeat Simple_repeat 2 28 0 234 0 0 0 chr20 8876246 8876272 -57791733 + (TG)n Simple_repeat Simple_repeat 1 26 0 196 281 52 42 chr20 8878214 8878310 -57789695 + MIR SINE MIR 91 187 -75 619 279 77 39 chr20 8878511 8878744 -57789261 - MIR SINE MIR 0 262 21 2506 68 0 0 chr20 8878783 8879094 -57788911 - AluY SINE Alu 0 311 1 199 346 148 36 chr20 8879118 8879502 -57788503 + L2 LINE L2 2864 3290 -23 1537 132 11 53 chr20 8879608 8879873 -57788132 + AluJb SINE Alu 1 254 -58 218 273 69 23 chr20 8880243 8880370 -57787635 - MIR SINE MIR -55 207 76 2084 124 7 3 chr20 8881493 8881792 -57786213 - AluSc SINE Alu -9 300 1 235 367 25 17 chr20 8881843 8881963 -57786042 - L2 LINE L2 0 3313 3193 435 222 65 24 chr20 8882052 8882208 -57785797 - MLT1I LTR MaLR -6 548 338 334 348 58 0 chr20 8883201 8883339 -57784666 - L2 LINE L2 0 3313 3168 379 361 27 32 chr20 8884120 8884339 -57783666 + MIR SINE MIR 12 229 -33 283 250 0 15 chr20 8884739 8884807 -57783198 + L2 LINE L2 3205 3271 -1 468 0 0 0 chr20 8885262 8885314 -57782691 + (TA)n Simple_repeat Simple_repeat 2 53 0 262 209 173 58 chr20 8886408 8886547 -57781458 + MIR SINE MIR 67 221 -41 22 35 0 0 chr20 8887220 8887249 -57780756 + AT_rich Low_complexity Low_complexity 1 29 0 990 296 42 15 chr20 8887503 8887838 -57780167 - MLT1I LTR MaLR -60 349 6 1352 199 34 24 chr20 8888270 8888562 -57779443 - AluJo SINE Alu -17 295 1 22 35 0 0 chr20 8890237 8890266 -57777739 + AT_rich Low_complexity Low_complexity 1 29 0 2397 158 16 23 chr20 8890294 8890730 -57777275 - Tigger2a DNA MER2_type -1 433 1 267 180 20 0 chr20 8890748 8890798 -57777207 - MER94 DNA DNA -79 55 5 266 254 14 0 chr20 8891580 8891651 -57776354 - LTR58 LTR ERV1 -249 430 359 1539 214 39 120 chr20 8891841 8892457 -57775548 - MER97b DNA MER1_type? -486 567 2 713 92 23 8 chr20 8893053 8893183 -57774822 + (TAGA)n Simple_repeat Simple_repeat 4 135 0 2431 79 0 16 chr20 8893770 8894087 -57773918 - AluSq SINE Alu 0 313 2 5366 145 26 54 chr20 8894255 8895382 -57772623 - L1MA7 LINE L1 0 6291 5195 270 109 23 46 chr20 8895958 8896033 -57771972 - L1MA7 LINE L1 0 6297 6230 2061 150 50 13 chr20 8896105 8896486 -57771519 - L1MA7 LINE L1 -37 6254 5860 318 162 59 15 chr20 8896525 8896593 -57771412 + L1ME3 LINE L1 5883 5953 -217 244 320 82 0 chr20 8896599 8896696 -57771309 + L1ME3 LINE L1 6008 6112 -50 1646 154 19 56 chr20 8897125 8897449 -57770556 + AluJo SINE Alu 1 312 0 840 140 11 101 chr20 8897482 8897554 -57770451 + AluJo SINE Alu 24 101 -211 2185 113 0 19 chr20 8897554 8897872 -57770133 + AluSx SINE Alu 1 312 0 840 140 11 101 chr20 8897872 8897978 -57770027 + AluJo SINE Alu 101 186 -126 460 299 153 0 chr20 8898236 8898393 -57769612 - MER5A DNA MER1_type 0 189 9 228 250 177 0 chr20 8899118 8899214 -57768791 - MLT1F LTR MaLR -19 523 411 2333 133 23 0 chr20 8899255 8899609 -57768396 - THE1B LTR MaLR -2 362 1 231 263 53 13 chr20 8899766 8899842 -57768163 - MLT1I LTR MaLR -266 143 65 429 20 0 0 chr20 8900062 8900112 -57767893 + (TA)n Simple_repeat Simple_repeat 2 51 0 196 313 100 0 chr20 8900422 8900502 -57767503 - L2 LINE L2 -236 3036 2949 887 173 6 6 chr20 8900734 8900890 -57767115 - LTR32 LTR ERVL 0 471 316 * 1914 142 41 38 chr20 8900889 8901233 -57766772 - LTR32 LTR ERVL -119 352 8 2386 82 0 0 chr20 8901299 8901591 -57766414 + AluSc SINE Alu 1 292 -17 445 164 0 0 chr20 8901599 8901672 -57766333 - AluJ/FRAM SINE Alu -16 296 224 253 352 30 91 chr20 8901974 8902011 -57765994 - L2 LINE L2 -4 3268 3230 3426 136 8 22 chr20 8902011 8902546 -57765459 - MER1A DNA MER1_type 0 527 1 253 352 30 91 chr20 8902546 8902872 -57765133 - L2 LINE L2 -42 3230 2927 849 236 56 20 chr20 8903916 8904202 -57763803 - L1ME3 LINE L1 -7 6155 5860 1374 168 4 4 chr20 8904829 8905055 -57762950 + AluJb SINE Alu 11 236 -76 549 145 8 97 chr20 8905628 8905752 -57762253 + LTR16A1 LTR ERVL 345 457 0 298 267 0 0 chr20 8906610 8906670 -57761335 - L2 LINE L2 -16 3297 3238 285 29 0 0 chr20 8906796 8906830 -57761175 + (TG)n Simple_repeat Simple_repeat 1 34 0 288 0 0 0 chr20 8906863 8906895 -57761110 + (TC)n Simple_repeat Simple_repeat 2 33 0 225 0 0 0 chr20 8906894 8906919 -57761086 + (TA)n Simple_repeat Simple_repeat 1 25 0 * 204 179 0 0 chr20 8907355 8907394 -57760611 + (TTAA)n Simple_repeat Simple_repeat 4 42 0 29 28 0 0 chr20 8908426 8908462 -57759543 + AT_rich Low_complexity Low_complexity 1 36 0 432 325 12 6 chr20 8909392 8909552 -57758453 + L1ME3A LINE L1 5970 6130 -40 432 290 61 41 chr20 8910445 8910690 -57757315 + MIR SINE MIR 13 262 0 786 242 44 24 chr20 8910938 8911186 -57756819 + L1ME3 LINE L1 5908 6160 -2 21 36 0 0 chr20 8911203 8911231 -57756774 + AT_rich Low_complexity Low_complexity 1 28 0 233 281 27 68 chr20 8911343 8911489 -57756516 + L1ME LINE L1 5683 5822 -299 1753 196 71 51 chr20 8911497 8911947 -57756058 + L1ME2 LINE L1 5548 6006 -158 725 265 80 61 chr20 8913188 8913649 -57754356 - L1ME3 LINE L1 -447 5723 5254 496 327 64 11 chr20 8913697 8914055 -57753950 - L1ME3 LINE L1 -3094 3052 2676 385 324 77 31 chr20 8914155 8914377 -57753628 - L1M4 LINE L1 -1120 5026 4795 229 182 18 36 chr20 8914845 8914900 -57753105 + (TATG)n Simple_repeat Simple_repeat 2 55 0 244 258 45 0 chr20 8916140 8916229 -57751776 + GA-rich Low_complexity Low_complexity 4 96 0 7644 28 0 0 chr20 8916235 8917459 -57750546 - L1PA3 LINE L1 0 6155 4957 867 162 32 13 chr20 8917509 8917663 -57750342 - AluJo/FRAM SINE Alu -21 291 135 441 167 0 0 chr20 8917663 8917735 -57750270 - AluJ/FLAM SINE Alu -236 76 5 180 0 0 0 chr20 8918503 8918523 -57749482 + (A)n Simple_repeat Simple_repeat 1 20 0 243 88 0 0 chr20 8918600 8918634 -57749371 + (A)n Simple_repeat Simple_repeat 1 34 0 322 133 20 21 chr20 8918974 8919068 -57748937 + MER20 DNA MER1_type 21 215 -4 528 236 27 20 chr20 8919223 8919371 -57748634 + MER69 DNA AcHobo 1 149 -2377 23 0 0 0 chr20 8919371 8919394 -57748611 + AT_rich Low_complexity Low_complexity 1 23 0 409 270 87 44 chr20 8919889 8920242 -57747763 - MLT1F LTR MaLR -105 444 81 1788 150 49 14 chr20 8920415 8921017 -57746988 - MER50 LTR ERV1 0 734 1 1525 187 14 21 chr20 8921762 8922046 -57745959 - AluJo SINE Alu -30 282 1 2040 113 24 0 chr20 8922193 8922484 -57745521 - AluSx SINE Alu -14 298 1 216 261 77 15 chr20 8922933 8922998 -57745007 + L2 LINE L2 3218 3286 -27 907 127 11 17 chr20 8923014 8923195 -57744810 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 21 36 0 0 chr20 8924299 8924327 -57743678 + AT_rich Low_complexity Low_complexity 1 28 0 203 358 11 11 chr20 8924663 8924758 -57743247 - L2 LINE L2 -501 2813 2719 494 44 29 0 chr20 8924947 8925015 -57742990 + (GAAA)n Simple_repeat Simple_repeat 1 70 0 264 284 46 28 chr20 8926113 8926222 -57741783 - MIR3 SINE MIR -3 205 95 329 248 8 86 chr20 8926309 8926426 -57741579 - L2 LINE L2 0 3313 3206 336 207 0 0 chr20 8926473 8926531 -57741474 + MER5A DNA MER1_type 49 106 -83 359 309 20 13 chr20 8926630 8926779 -57741226 - L2 LINE L2 -455 2859 2710 676 274 74 0 chr20 8926813 8927003 -57741002 + L1ME1 LINE L1 5946 6149 -17 2047 109 87 6 chr20 8927048 8927395 -57740610 + THE1C LTR MaLR 1 375 0 770 128 7 28 chr20 8927450 8927591 -57740414 + L1PA16 LINE L1 6029 6166 0 293 310 26 69 chr20 8927755 8927977 -57740028 + MIR3 SINE MIR 5 216 -46 200 349 108 23 chr20 8928328 8928457 -57739548 - L2 LINE L2 0 3272 3133 604 342 57 53 chr20 8928619 8929125 -57738880 - L2 LINE L2 -384 2930 2423 268 261 81 9 chr20 8929220 8929331 -57738674 - MIR SINE MIR -56 206 88 2404 84 7 3 chr20 8929432 8929740 -57738265 + AluSg SINE Alu 1 309 -1 470 327 57 46 chr20 8930847 8931434 -57736571 + L2 LINE L2 2396 3060 -253 571 194 17 35 chr20 8931458 8931786 -57736219 + CT-rich Low_complexity Low_complexity 1 321 0 314 217 14 14 chr20 8931808 8931946 -57736059 + CT-rich Low_complexity Low_complexity 2 139 0 264 125 47 0 chr20 8931950 8932014 -57735991 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 322 312 65 43 chr20 8932051 8932237 -57735768 + L2 LINE L2 3123 3312 -1 1142 88 25 6 chr20 8932403 8932562 -57735443 + L1PA8 LINE L1 5998 6159 -13 33 0 0 0 chr20 8932581 8932614 -57735391 + AT_rich Low_complexity Low_complexity 1 33 0 1233 130 89 71 chr20 8932837 8932993 -57735012 + THE1C LTR MaLR 1 166 -209 1555 154 95 7 chr20 8932993 8933266 -57734739 - AluSx SINE Alu -12 300 4 1233 130 89 71 chr20 8933266 8933378 -57734627 + THE1C LTR MaLR 166 274 -101 2133 92 3 3 chr20 8933381 8933676 -57734329 + THE1C-int LTR MaLR 1285 1579 -1 1937 141 65 23 chr20 8933677 8934031 -57733974 + THE1C LTR MaLR 1 369 -6 200 271 0 0 chr20 8934239 8934287 -57733718 + CT-rich Low_complexity Low_complexity 1 48 0 845 270 172 3 chr20 8934930 8935249 -57732756 + LTR16C LTR ERVL 88 460 -31 29 0 0 0 chr20 8935622 8935651 -57732354 + AT_rich Low_complexity Low_complexity 1 29 0 1896 149 4 7 chr20 8937123 8937404 -57730601 + AluSx SINE Alu 8 287 -25 2629 230 34 36 chr20 8937442 8938178 -57729827 + L1ME2 LINE L1 5442 6334 0 207 0 0 0 chr20 8938368 8938391 -57729614 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 645 272 42 9 chr20 8938401 8938618 -57729387 - L1M4 LINE L1 -6318 224 1 1040 264 66 59 chr20 8939614 8940053 -57727952 + L1M4 LINE L1 325 766 -5776 414 0 0 0 chr20 8940054 8940100 -57727905 + (TG)n Simple_repeat Simple_repeat 2 47 0 476 200 61 0 chr20 8940102 8940217 -57727788 + L1M4 LINE L1 823 944 -5598 * 4100 183 27 18 chr20 8940211 8940369 -57727636 + L1MB3 LINE L1 5318 5473 -710 379 47 0 31 chr20 8940369 8940433 -57727572 + (TAAA)n Simple_repeat Simple_repeat 3 64 0 4100 183 27 18 chr20 8940433 8941130 -57726875 + L1MB3 LINE L1 5473 6181 -2 921 208 38 19 chr20 8941125 8941389 -57726616 + L1M4 LINE L1 926 1194 -5348 * 1727 128 28 28 chr20 8941391 8941712 -57726293 + L1MA3 LINE L1 5977 6297 -8 22 0 0 0 chr20 8941717 8941739 -57726266 + AT_rich Low_complexity Low_complexity 1 22 0 2668 246 48 38 chr20 8941786 8943185 -57724820 + L1M4 LINE L1 1438 2960 -3684 245 374 52 0 chr20 8943335 8943450 -57724555 - L2 LINE L2 -1 3271 3151 897 231 11 5 chr20 8943453 8943639 -57724366 - MER5A DNA MER1_type 0 189 3 566 239 68 6 chr20 8943653 8943816 -57724189 - MER5B DNA MER1_type -4 174 2 447 315 0 31 chr20 8943816 8943946 -57724059 + MER5B DNA MER1_type 8 133 -45 222 176 106 59 chr20 8944302 8944387 -57723618 + L3b LINE CR1 1296 1384 -199 453 316 23 0 chr20 8945594 8945768 -57722237 - MER5B DNA MER1_type 0 178 1 565 301 28 6 chr20 8946765 8946941 -57721064 - LTR33 LTR ERVL -315 206 27 8671 72 9 1 chr20 8946957 8948878 -57719127 + L1PA7 LINE L1 4204 6143 -11 39 74 0 0 chr20 8948888 8948969 -57719036 + AT_rich Low_complexity Low_complexity 1 81 0 392 266 5 101 chr20 8949067 8949255 -57718750 + MLT1J LTR MaLR 133 302 -209 21 36 0 0 chr20 8949391 8949419 -57718586 + AT_rich Low_complexity Low_complexity 1 28 0 633 164 0 0 chr20 8951042 8951152 -57716853 + 7SLRNA srpRNA srpRNA 210 319 -1 863 299 49 51 chr20 8952161 8952650 -57715355 - LTR16C LTR ERVL -2 489 2 268 313 102 23 chr20 8952981 8953246 -57714759 + L1ME4a LINE L1 5724 6009 -112 574 277 101 42 chr20 8953259 8953713 -57714292 - MLT1K LTR MaLR -1 571 111 215 296 14 0 chr20 8953784 8953855 -57714150 + (TATATG)n Simple_repeat Simple_repeat 1 72 0 322 294 108 0 chr20 8953912 8954014 -57713991 - L2 LINE L2 0 3313 3201 1722 331 73 30 chr20 8954016 8954591 -57713414 - L2 LINE L2 -29 3284 2735 1992 146 0 19 chr20 8954591 8954906 -57713099 + AluSx SINE Alu 1 309 -3 1722 331 73 30 chr20 8954906 8955245 -57712760 - L2 LINE L2 -578 2735 2412 4295 209 60 14 chr20 8955245 8956238 -57711767 - MER45B DNA AcHobo -1 1039 1 1722 331 73 30 chr20 8956238 8956819 -57711186 - L2 LINE L2 -901 2412 1713 2056 122 17 3 chr20 8957518 8957813 -57710192 + AluSx SINE Alu 1 299 -13 1509 269 42 12 chr20 8957902 8958303 -57709702 - LTR16C LTR ERVL -13 478 66 269 255 11 53 chr20 8958447 8958541 -57709464 - MIR3 SINE MIR -37 171 82 2441 61 0 29 chr20 8960545 8960857 -57707148 + AluY SINE Alu 1 303 -8 262 211 0 89 chr20 8962465 8962555 -57705450 + MLT1H LTR MaLR 7 88 -461 259 236 9 104 chr20 8962827 8962933 -57705072 + MLT1H LTR MaLR 454 549 0 2189 161 30 39 chr20 8963195 8963654 -57704351 - MER74A LTR ERVL -103 455 1 534 327 147 31 chr20 8964020 8964547 -57703458 - L2 LINE L2 -9 3263 2678 353 242 66 11 chr20 8964549 8964640 -57703365 + L2 LINE L2 3152 3247 -25 232 243 29 14 chr20 8964689 8964759 -57703246 + MLT1J LTR MaLR 111 181 -330 575 197 8 34 chr20 8965019 8965136 -57702869 + MER81 DNA DNA 1 114 0 794 265 5 28 chr20 8965301 8965516 -57702489 - MER63A DNA MER1_type 0 210 1 1377 235 22 35 chr20 8965571 8965976 -57702029 + LTR16A1 LTR ERVL 5 404 -53 2279 153 23 48 chr20 8965988 8966103 -57701902 + L1MB3 LINE L1 5711 5827 -356 2175 139 0 3 chr20 8966103 8966412 -57701593 + AluSx SINE Alu 1 308 -4 2279 153 23 48 chr20 8966412 8966779 -57701226 + L1MB3 LINE L1 5827 6181 -2 276 200 67 0 chr20 8966832 8966892 -57701113 + LTR16A1 LTR ERVL 394 457 0 399 56 0 0 chr20 8967851 8967905 -57700100 + (CA)n Simple_repeat Simple_repeat 2 55 0 2190 119 0 0 chr20 8968091 8968386 -57699619 - AluSg SINE Alu -15 295 1 185 357 56 56 chr20 8968867 8969063 -57698942 + L2 LINE L2 2841 3036 -277 194 387 95 41 chr20 8969204 8969447 -57698558 + L2 LINE L2 3017 3272 0 25 0 0 0 chr20 8970568 8970593 -57697412 + AT_rich Low_complexity Low_complexity 1 25 0 188 348 14 0 chr20 8971279 8971348 -57696657 + MIR3 SINE MIR 134 203 -5 1491 181 32 74 chr20 8971804 8972208 -57695797 + MLT1B LTR MaLR 1 387 -3 347 254 146 0 chr20 8972604 8972714 -57695291 - L2 LINE L2 0 3313 3188 2107 139 0 72 chr20 8972777 8973008 -57694997 - MLT1A1 LTR MaLR 0 365 172 1965 166 3 10 chr20 8973008 8973316 -57694689 - AluJb SINE Alu -6 306 1 2107 139 0 72 chr20 8973316 8973473 -57694532 - MLT1A1 LTR MaLR -193 172 5 21 36 0 0 chr20 8973771 8973799 -57694206 + AT_rich Low_complexity Low_complexity 1 28 0 1698 203 85 34 chr20 8973874 8974215 -57693790 - MLT1D LTR MaLR -9 496 123 2997 51 8 0 chr20 8974215 8974590 -57693415 - L1PA10 LINE L1 -5 6163 5786 1698 203 85 34 chr20 8974590 8974720 -57693285 - MLT1D LTR MaLR -382 123 1 2685 117 32 15 chr20 8975274 8975737 -57692268 - Tigger4(Zombi) DNA MER2_type 0 2731 2261 2435 155 58 7 chr20 8975736 8976168 -57691837 - Tigger4(Zombi) DNA MER2_type -2277 454 1 * 672 231 24 18 chr20 8976278 8976447 -57691558 + MER5B DNA MER1_type 1 170 -8 1519 186 51 7 chr20 8976581 8976739 -57691266 - AluJo SINE Alu -25 287 110 261 83 0 0 chr20 8976739 8976775 -57691230 + (TG)n Simple_repeat Simple_repeat 1 36 0 1519 186 51 7 chr20 8976775 8976891 -57691114 - AluJo SINE Alu -202 110 1 186 150 0 0 chr20 8977023 8977063 -57690942 + (TTTTTA)n Simple_repeat Simple_repeat 2 41 0 1501 182 13 64 chr20 8977285 8977598 -57690407 - AluJo SINE Alu -15 297 1 482 245 159 6 chr20 8977797 8977960 -57690045 - MER5A DNA MER1_type 0 189 2 41217 29 22 1 chr20 8978499 8984525 -57683480 - L1PA2 LINE L1 -2 6153 1 1887 77 8 4 chr20 8984617 8984878 -57683127 - L1PA13 LINE L1 -6 6157 5896 207 200 0 60 chr20 8984961 8985011 -57682994 - MIR SINE MIR -2 260 214 1013 153 68 0 chr20 8986949 8987125 -57680880 + MER5A DNA MER1_type 1 188 -1 889 104 0 104 chr20 8987236 8987368 -57680637 + L1MB5 LINE L1 6012 6121 -53 2190 149 0 0 chr20 8987368 8987676 -57680329 + AluSx SINE Alu 1 308 -4 889 104 0 104 chr20 8987676 8987725 -57680280 + L1MB5 LINE L1 6121 6174 0 21 36 0 0 chr20 8988197 8988225 -57679780 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr20 8988335 8988366 -57679639 + AT_rich Low_complexity Low_complexity 1 31 0 395 287 128 39 chr20 8988473 8988808 -57679197 - L1ME4a LINE L1 -11 6110 5746 186 43 0 0 chr20 8989003 8989026 -57678979 + (T)n Simple_repeat Simple_repeat 1 23 0 2266 167 9 23 chr20 8989057 8989494 -57678511 - L1PB4 LINE L1 -13 6143 5713 311 253 0 13 chr20 8989754 8989829 -57678176 + MIR SINE MIR 93 166 -96 308 326 93 17 chr20 8989981 8990217 -57677788 - L1 LINE L1 -2385 3761 3508 203 355 19 56 chr20 8990289 8990396 -57677609 - L2 LINE L2 -617 2697 2595 858 280 102 56 chr20 8990410 8990993 -57677012 + L2 LINE L2 2389 2991 -322 197 280 0 0 chr20 8991153 8991203 -57676802 + L2 LINE L2 3223 3272 0 702 109 5 9 chr20 8991289 8991417 -57676588 + L1MA8 LINE L1 6161 6277 -14 241 194 57 89 chr20 8991463 8991587 -57676418 + L1ME3 LINE L1 6043 6162 0 617 75 0 0 chr20 8992579 8992659 -57675346 + MADE1 DNA Mariner 1 80 0 698 205 0 54 chr20 8993046 8993212 -57674793 - FRAM SINE Alu -20 156 1 2977 179 14 16 chr20 8993298 8993552 -57674453 - L1MB7 LINE L1 -30 6154 5901 517 113 0 0 chr20 8993552 8993632 -57674373 - MADE1 DNA Mariner 0 80 1 2977 179 14 16 chr20 8993632 8994003 -57674002 - L1MB7 LINE L1 -283 5901 5530 1237 193 33 0 chr20 8994005 8994310 -57673695 - L1MB7 LINE L1 -885 5261 4947 28 61 0 0 chr20 8994473 8994522 -57673483 + AT_rich Low_complexity Low_complexity 1 49 0 1004 193 0 0 chr20 8995193 8995364 -57672641 + AluJb SINE Alu 133 303 -9 232 345 160 24 chr20 8995417 8995623 -57672382 + L2 LINE L2 3038 3271 -1 258 81 0 0 chr20 8996196 8996233 -57671772 - tRNA-Cys-TGC tRNA tRNA -38 37 1 21 36 0 0 chr20 8996509 8996537 -57671468 + AT_rich Low_complexity Low_complexity 1 28 0 366 316 65 53 chr20 8997175 8997625 -57670380 + L1ME LINE L1 5056 5505 -657 231 180 33 0 chr20 8997653 8997714 -57670291 + L1ME LINE L1 5603 5665 -456 287 264 149 0 chr20 8997732 8997873 -57670132 + L1ME LINE L1 5649 5812 -309 24 32 0 0 chr20 8997884 8997915 -57670090 + AT_rich Low_complexity Low_complexity 1 31 0 387 0 0 0 chr20 8997982 8998025 -57669980 + (TG)n Simple_repeat Simple_repeat 2 44 0 820 214 71 5 chr20 8998047 8998243 -57669762 - MER3 DNA MER1_type 0 209 1 280 215 131 9 chr20 8998243 8998350 -57669655 + HAL1b LINE L1 1212 1331 -17 386 192 0 0 chr20 8998388 8998466 -57669539 - L1ME4a LINE L1 -81 6040 5963 384 299 17 75 chr20 8999278 8999519 -57668486 + L2 LINE L2 2325 2551 -763 627 345 50 61 chr20 8999616 9000059 -57667946 + L2 LINE L2 2835 3272 0 1446 210 44 5 chr20 9000581 9000948 -57667057 - MER63 DNA MER1_type -5 1057 677 220 167 33 0 chr20 9000954 9001014 -57666991 + T-rich Low_complexity Low_complexity 4 65 0 669 200 0 15 chr20 9001777 9001912 -57666093 + FLAM_C SINE Alu 1 133 0 2254 88 54 0 chr20 9002552 9002846 -57665159 + AluSg SINE Alu 1 310 0 251 308 39 54 chr20 9003397 9003527 -57664478 + MIR SINE MIR 61 188 -74 650 338 5 0 chr20 9003637 9003841 -57664164 - MIR SINE MIR -14 248 44 1836 166 9 34 chr20 9003855 9004175 -57663830 + AluSx SINE Alu 1 312 0 271 320 164 0 chr20 9005177 9005305 -57662700 + MIR SINE MIR 45 193 -69 1925 82 15 8 chr20 9005404 9005671 -57662334 + AluSc SINE Alu 32 300 -9 754 269 50 11 chr20 9005915 9006198 -57661807 + LTR16C LTR ERVL 196 489 -2 254 56 481 0 chr20 9006238 9006292 -57661713 - MADE1 DNA Mariner 0 80 1 2192 104 0 0 chr20 9009311 9009598 -57658407 + AluSx SINE Alu 19 305 -7 217 224 190 17 chr20 9011503 9011561 -57656444 + MIR3 SINE MIR 89 156 -52 2272 110 7 0 chr20 9012050 9012359 -57655646 + AluSx SINE Alu 1 311 -1 28 79 0 0 chr20 9012619 9012682 -57655323 + AT_rich Low_complexity Low_complexity 1 63 0 1507 95 9 48 chr20 9013176 9013227 -57654778 - AluSc SINE Alu 0 597 546 1213 50 11 17 chr20 9013227 9013408 -57654597 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1507 95 9 48 chr20 9013408 9013707 -57654298 - AluSc SINE Alu -51 546 76 796 176 98 0 chr20 9014521 9014674 -57653331 - MER5A DNA MER1_type -20 169 2 264 273 174 37 chr20 9014689 9014850 -57653155 - Charlie8 DNA MER1_type -2233 184 2 324 48 0 0 chr20 9015423 9015465 -57652540 + (T)n Simple_repeat Simple_repeat 1 42 0 1915 279 75 47 chr20 9015751 9016499 -57651506 - L2 LINE L2 0 3313 2512 423 0 0 0 chr20 9016499 9016546 -57651459 + (CA)n Simple_repeat Simple_repeat 2 48 0 1915 279 75 47 chr20 9016546 9017014 -57650991 - L2 LINE L2 -801 2512 2058 1052 252 192 19 chr20 9017047 9017574 -57650431 - L1ME3A LINE L1 -2 6168 5551 468 248 53 0 chr20 9018121 9018234 -57649771 - L2 LINE L2 -3 3269 3151 301 118 44 29 chr20 9018649 9018717 -57649288 + GA-rich Low_complexity Low_complexity 2 70 0 2429 65 3 7 chr20 9021283 9021591 -57646414 - AluY SINE Alu -4 307 1 301 276 112 26 chr20 9022114 9022266 -57645739 - MIR SINE MIR -7 255 91 183 80 0 0 chr20 9022363 9022388 -57645617 + (TTTTC)n Simple_repeat Simple_repeat 1 25 0 2392 115 19 24 chr20 9022412 9022787 -57645218 - MER83C LTR ERV1 0 373 1 233 336 103 30 chr20 9022853 9023124 -57644881 - MLT1J LTR MaLR -192 319 29 29 28 0 0 chr20 9025976 9026012 -57641993 + AT_rich Low_complexity Low_complexity 1 36 0 327 158 18 0 chr20 9026096 9026153 -57641852 + L1MC1 LINE L1 5993 6050 -283 257 291 34 60 chr20 9026529 9026646 -57641359 + L2 LINE L2 2583 2696 -618 892 39 10 0 chr20 9027039 9027142 -57640863 + AluY SINE Alu 35 138 -173 7214 44 15 32 chr20 9027154 9028720 -57639285 + SVA Other Other 1 1384 -2 225 234 0 31 chr20 9030075 9030139 -57637866 + A-rich Low_complexity Low_complexity 4 65 0 259 224 20 41 chr20 9030764 9030862 -57637143 - L1ME LINE L1 -466 5704 5609 801 236 120 27 chr20 9030956 9031248 -57636757 + L1ME3A LINE L1 5844 6162 -8 508 250 71 14 chr20 9031710 9031922 -57636083 - MER102b DNA MER1_type 0 341 118 1897 189 0 3 chr20 9032055 9032368 -57635637 + AluJb SINE Alu 1 312 0 33 43 0 0 chr20 9032375 9032422 -57635583 + AT_rich Low_complexity Low_complexity 1 47 0 2066 153 105 15 chr20 9032863 9033255 -57634750 + MSTC LTR MaLR 1 427 -1 559 190 0 16 chr20 9033258 9033379 -57634626 + MSTC-int LTR MaLR 2 120 -1615 389 210 91 35 chr20 9033492 9033599 -57634406 + Charlie7 DNA MER1_type 571 689 -1923 2305 177 51 17 chr20 9033599 9034069 -57633936 + MER66B LTR ERV1 1 486 0 389 210 91 35 chr20 9034069 9034104 -57633901 + Charlie7 DNA MER1_type 689 721 -1891 280 209 107 45 chr20 9034097 9034274 -57633731 + Charlie7 DNA MER1_type 2417 2604 -8 * 364 276 135 29 chr20 9034985 9035155 -57632850 - L2 LINE L2 -9 3304 3117 213 337 10 40 chr20 9035174 9035275 -57632730 - L2 LINE L2 -292 2980 2883 22 99 0 0 chr20 9036622 9036693 -57631312 + AT_rich Low_complexity Low_complexity 1 71 0 22 35 0 0 chr20 9037024 9037053 -57630952 + AT_rich Low_complexity Low_complexity 1 29 0 456 309 33 13 chr20 9037259 9037411 -57630594 + MIR SINE MIR 87 241 -21 340 279 143 19 chr20 9037829 9038087 -57629918 - L2 LINE L2 -5 3308 3019 245 275 143 11 chr20 9038708 9038799 -57629206 - L2 LINE L2 0 3313 3211 191 323 0 0 chr20 9039627 9039689 -57628316 - L2 LINE L2 -1 3271 3210 365 289 33 8 chr20 9040428 9040549 -57627456 + GA-rich Low_complexity Low_complexity 6 129 0 206 247 221 26 chr20 9041014 9041091 -57626914 + MIR3 SINE MIR 92 183 -25 2222 142 0 0 chr20 9043109 9043418 -57624587 + AluSx SINE Alu 3 311 -1 30 0 0 0 chr20 9044144 9044174 -57623831 + AT_rich Low_complexity Low_complexity 1 30 0 307 337 82 25 chr20 9044287 9044483 -57623522 + MIR SINE MIR 53 259 -3 227 187 41 0 chr20 9045339 9045510 -57622495 + (TA)n Simple_repeat Simple_repeat 1 178 0 366 161 81 0 chr20 9045510 9045659 -57622346 + (TTATA)n Simple_repeat Simple_repeat 1 161 0 * 414 208 46 6 chr20 9045645 9045818 -57622187 + (TA)n Simple_repeat Simple_repeat 1 180 0 392 171 39 50 chr20 9045846 9046027 -57621978 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 268 271 8 4 chr20 9046037 9046155 -57621850 - MER5A DNA MER1_type -6 183 15 337 231 50 16 chr20 9046541 9046662 -57621343 + (CATATA)n Simple_repeat Simple_repeat 2 126 0 1040 291 73 30 chr20 9047983 9048477 -57619528 - MLT1K LTR MaLR -1 587 73 293 239 45 0 chr20 9049257 9049324 -57618681 + MIR3 SINE MIR 89 158 -50 1089 247 22 0 chr20 9049472 9049743 -57618262 + LTR16C LTR ERVL 215 491 0 471 247 39 19 chr20 9051899 9052053 -57615952 - LTR16C LTR ERVL 0 491 335 229 182 68 0 chr20 9052583 9052627 -57615378 - L2 LINE L2 0 3313 3267 225 119 24 24 chr20 9052767 9052809 -57615196 - MIR SINE MIR -102 160 119 242 323 78 46 chr20 9053540 9053757 -57614248 + MIR SINE MIR 40 262 0 316 304 22 29 chr20 9055225 9055363 -57612642 + MIR SINE MIR 43 179 -83 669 235 18 99 chr20 9055467 9055688 -57612317 + MIR SINE MIR 2 204 -58 2228 106 0 0 chr20 9056227 9056554 -57611451 + AluSx SINE Alu 1 327 0 347 259 47 0 chr20 9057184 9057269 -57610736 - L2 LINE L2 -2 3311 3223 764 233 48 15 chr20 9057279 9057485 -57610520 + LTR16C LTR ERVL 67 279 -212 451 257 45 54 chr20 9057505 9057727 -57610278 - L2 LINE L2 -81 3232 3013 2443 260 107 72 chr20 9059032 9059485 -57608520 + HAL1 LINE L1 2 438 -2069 1932 144 30 0 chr20 9059485 9059784 -57608221 + AluSx SINE Alu 1 308 -4 2443 260 107 72 chr20 9059784 9060509 -57607496 + HAL1 LINE L1 438 1260 -1247 2101 93 3 40 chr20 9060509 9060811 -57607194 + AluSp SINE Alu 1 291 -22 2443 260 107 72 chr20 9060811 9061368 -57606637 + HAL1 LINE L1 1260 1797 -710 1121 277 103 14 chr20 9061369 9061875 -57606130 + HAL1 LINE L1 1852 2402 -105 205 260 156 52 chr20 9063351 9063447 -57604558 - L3 LINE CR1 0 1577 1472 26 30 0 0 chr20 9064125 9064158 -57603847 + AT_rich Low_complexity Low_complexity 1 33 0 378 184 13 0 chr20 9064251 9064327 -57603678 + LTR37B LTR ERV1 209 285 -183 314 319 0 0 chr20 9064384 9064475 -57603530 + L1MC4 LINE L1 6613 6703 -1339 347 0 23 0 chr20 9064484 9064527 -57603478 + (TA)n Simple_repeat Simple_repeat 1 44 0 383 281 156 6 chr20 9064654 9064821 -57603184 - MER117 DNA MER1_type -5 192 1 279 273 13 0 chr20 9065124 9065201 -57602804 - MER116 DNA Mariner -2 78 1 208 360 132 0 chr20 9065422 9065536 -57602469 + L2 LINE L2 3143 3271 -1 1264 160 0 5 chr20 9065616 9065829 -57602176 + AluJo SINE Alu 1 212 -100 815 275 54 85 chr20 9066133 9066781 -57601224 + L1ME4a LINE L1 5491 6118 -3 387 117 91 0 chr20 9066966 9067043 -57600962 + L1MA9 LINE L1 6229 6312 0 2440 68 0 3 chr20 9067287 9067581 -57600424 - AluY SINE Alu -18 293 1 342 0 0 0 chr20 9067627 9067665 -57600340 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1933 88 15 4 chr20 9067668 9067931 -57600074 - AluSx SINE Alu -26 286 21 298 198 0 47 chr20 9067934 9068040 -57599965 - L1ME4a LINE L1 -34 6087 5987 2052 111 0 42 chr20 9068847 9069153 -57598852 + AluSq SINE Alu 9 301 -12 468 186 76 0 chr20 9069302 9069420 -57598585 - Charlie4 DNA MER1_type -29 1932 1806 377 239 97 9 chr20 9069511 9069624 -57598381 - Charlie4 DNA MER1_type -1796 165 43 667 213 59 95 chr20 9070089 9070310 -57597695 - L1MC4 LINE L1 -1050 6992 6687 1900 154 4 0 chr20 9070417 9070719 -57597286 - AluJo SINE Alu 0 306 4 26 0 0 0 chr20 9070724 9070750 -57597255 + AT_rich Low_complexity Low_complexity 1 26 0 6374 172 9 8 chr20 9070750 9072936 -57595069 - L1PB1 LINE L1 -8 6143 3958 1892 208 52 92 chr20 9073618 9074334 -57593671 - LTR8 LTR ERV1 0 691 5 25 65 0 0 chr20 9074689 9074735 -57593270 + AT_rich Low_complexity Low_complexity 1 46 0 591 303 143 65 chr20 9075927 9076485 -57591520 - MLT1L LTR MaLR -5 610 9 185 344 122 0 chr20 9076503 9076593 -57591412 + L2 LINE L2 3134 3234 -38 1704 203 0 0 chr20 9078817 9079108 -57588897 + AluJo SINE Alu 1 291 -21 2798 200 48 18 chr20 9079396 9080122 -57587883 - L1M4 LINE L1 -978 5168 4421 2352 74 0 0 chr20 9080123 9080430 -57587575 - AluY SINE Alu 0 307 1 21 0 0 0 chr20 9080430 9080451 -57587554 + AT_rich Low_complexity Low_complexity 1 21 0 449 262 69 50 chr20 9080605 9080807 -57587198 + MIR SINE MIR 57 262 0 254 262 24 71 chr20 9081531 9081657 -57586348 - L1ME3 LINE L1 -77 6085 5966 1374 244 71 3 chr20 9081940 9082276 -57585729 - MER90 LTR ERV1 0 614 256 509 316 25 22 chr20 9082274 9082597 -57585408 - MER115 DNA AcHobo -258 435 17 * 702 333 95 24 chr20 9082660 9083080 -57584925 - L2 LINE L2 -2525 789 340 699 245 74 0 chr20 9084354 9084517 -57583488 + MER96 DNA MER1_type 1 175 0 1222 248 40 83 chr20 9084616 9085145 -57582860 + L2 LINE L2 2804 3309 -4 210 246 33 0 chr20 9086387 9086448 -57581557 + GA-rich Low_complexity Low_complexity 6 68 0 624 277 36 51 chr20 9086450 9086703 -57581302 + MIR SINE MIR 8 256 -6 1977 157 3 3 chr20 9087469 9087774 -57580231 + AluSx SINE Alu 1 305 -7 613 264 0 0 chr20 9087982 9088107 -57579898 + MER58A DNA MER1_type 1 125 0 2076 206 60 27 chr20 9088134 9088585 -57579420 - MLT2B1 LTR ERVL -53 467 2 497 174 37 64 chr20 9088585 9088693 -57579312 + MER58A DNA MER1_type 120 224 0 1240 312 112 18 chr20 9088768 9089403 -57578602 - L2 LINE L2 0 3313 2576 582 333 79 11 chr20 9089403 9089782 -57578223 - MLT1I LTR MaLR -4 405 1 1240 312 112 18 chr20 9089782 9089934 -57578071 - L2 LINE L2 -737 2576 2440 199 264 103 69 chr20 9090115 9090202 -57577803 + MIR SINE MIR 37 126 -82 572 253 71 13 chr20 9090255 9090409 -57577596 - MIR SINE MIR -78 184 22 328 304 112 32 chr20 9090774 9091175 -57576830 + L1MB8 LINE L1 5352 5784 -337 1624 183 11 38 chr20 9091248 9091614 -57576391 + L1MB8 LINE L1 5823 6178 0 2346 129 61 24 chr20 9093437 9093849 -57574156 - MSTA LTR MaLR -1 427 1 2222 91 3 0 chr20 9093900 9094185 -57573820 - AluSp SINE Alu -1 312 27 988 265 8 36 chr20 9094349 9094602 -57573403 - MIR SINE MIR -2 260 15 434 182 196 28 chr20 9095157 9095300 -57572705 - MER117 DNA MER1_type -30 167 1 2070 108 20 23 chr20 9095422 9095727 -57572278 + AluSc SINE Alu 5 308 -1 296 323 65 0 chr20 9095834 9095958 -57572047 + MER5A DNA MER1_type 32 163 -26 287 313 88 27 chr20 9095836 9095983 -57572022 - MER5A DNA MER1_type -22 167 12 * 193 346 13 13 chr20 9096026 9096104 -57571901 + MIR SINE MIR 60 137 -125 1993 128 33 7 chr20 9096576 9096880 -57571125 - AluSx SINE Alu 0 312 1 377 209 0 44 chr20 9096921 9097012 -57570993 + MER5A DNA MER1_type 6 92 -97 239 316 58 29 chr20 9097087 9097226 -57570779 + MER5A DNA MER1_type 18 160 -29 673 184 177 19 chr20 9097515 9097673 -57570332 - MER5A DNA MER1_type 0 189 7 199 200 32 116 chr20 9098805 9098900 -57569105 - MIR SINE MIR -44 218 132 212 259 0 17 chr20 9099141 9099199 -57568806 + CT-rich Low_complexity Low_complexity 2 58 0 1815 115 9 96 chr20 9101306 9101629 -57566376 + AluSx SINE Alu 1 295 -17 1876 188 85 25 chr20 9101692 9102165 -57565840 - MLT1D LTR MaLR -2 503 3 2178 241 43 23 chr20 9102620 9103222 -57564783 + L1ME3A LINE L1 5556 6169 -1 24 0 0 0 chr20 9104205 9104229 -57563776 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr20 9104243 9104266 -57563739 + AT_rich Low_complexity Low_complexity 1 23 0 946 197 0 75 chr20 9106203 9106416 -57561589 + AluJo SINE Alu 86 282 -30 922 234 21 30 chr20 9106982 9107217 -57560788 - MIR SINE MIR -27 235 3 1261 107 51 23 chr20 9107415 9107630 -57560375 + L1PA13 LINE L1 5940 6160 -3 1652 133 91 34 chr20 9109789 9110142 -57557863 - THE1C LTR MaLR -2 373 1 199 329 26 0 chr20 9110147 9110223 -57557782 + MIR3 SINE MIR 129 206 -2 188 309 86 0 chr20 9111059 9111140 -57556865 + MIR SINE MIR 118 205 -57 697 272 24 0 chr20 9111546 9111715 -57556290 - MIR SINE MIR -62 200 28 21 71 0 0 chr20 9112995 9113037 -57554968 + AT_rich Low_complexity Low_complexity 1 42 0 427 310 46 43 chr20 9113134 9113482 -57554523 - L1ME LINE L1 -461 5660 5312 304 293 81 72 chr20 9113808 9114153 -57553852 - L1ME LINE L1 -1312 4834 4487 24 0 0 0 chr20 9114219 9114243 -57553762 + AT_rich Low_complexity Low_complexity 1 24 0 21 57 0 0 chr20 9114257 9114292 -57553713 + AT_rich Low_complexity Low_complexity 1 35 0 888 201 67 4 chr20 9114595 9114834 -57553171 - L1MA4 LINE L1 -2 6298 6045 240 286 102 39 chr20 9114829 9115035 -57552970 - L1ME LINE L1 -2039 4107 3889 * 402 250 139 49 chr20 9115573 9115917 -57552088 + L1ME LINE L1 5405 5779 -342 258 121 0 72 chr20 9115924 9116007 -57551998 + (TTATA)n Simple_repeat Simple_repeat 3 79 0 22 88 0 0 chr20 9116078 9116135 -57551870 + AT_rich Low_complexity Low_complexity 1 57 0 362 125 89 30 chr20 9116140 9116308 -57551697 + (TA)n Simple_repeat Simple_repeat 2 179 0 271 56 0 0 chr20 9116959 9116995 -57551010 - L1PA3 LINE L1 -199 5956 5921 1550 48 0 0 chr20 9116995 9117225 -57550780 + L1PA3 LINE L1 5951 6180 0 2465 44 0 47 chr20 9117237 9117558 -57550447 + AluY SINE Alu 1 306 -5 250 167 0 28 chr20 9117919 9117991 -57550014 + (TA)n Simple_repeat Simple_repeat 2 71 0 1656 143 109 37 chr20 9119904 9120254 -57547751 - THE1C LTR MaLR 0 375 1 316 305 6 85 chr20 9121231 9121395 -57546610 + MIR SINE MIR 106 256 -6 1655 0 0 0 chr20 9121661 9121853 -57546152 - L1P1 LINE L1 -579 5576 5385 817 38 0 9 chr20 9121853 9121958 -57546047 + L1PA3 LINE L1 6052 6155 0 2105 128 7 7 chr20 9122266 9122571 -57545434 + AluSx SINE Alu 1 305 -7 939 134 0 0 chr20 9123280 9123407 -57544598 + AluJo SINE Alu 1 127 -185 336 214 27 0 chr20 9124700 9124812 -57543193 + (TGGA)n Simple_repeat Simple_repeat 3 117 0 431 238 123 46 chr20 9125870 9126194 -57541811 - L1ME4a LINE L1 -30 6091 5743 360 123 14 27 chr20 9126208 9126281 -57541724 - L1MA3 LINE L1 -1 6304 6233 2886 140 15 19 chr20 9126281 9126811 -57541194 - L1 LINE L1 -1823 4323 3796 762 210 22 49 chr20 9126840 9127064 -57540941 + LTR16A1 LTR ERVL 232 449 -8 680 156 55 0 chr20 9127453 9127581 -57540424 + L1PA15 LINE L1 6031 6165 0 796 201 28 0 chr20 9127857 9128001 -57540004 + AluJo SINE Alu 135 282 -30 463 0 48 0 chr20 9128004 9128066 -57539939 + (TAAAA)n Simple_repeat Simple_repeat 2 66 0 305 279 102 14 chr20 9129212 9129327 -57538678 - L1ME4a LINE L1 -36 6085 5953 2231 116 0 0 chr20 9129327 9129629 -57538376 - AluSx SINE Alu -10 302 1 305 279 102 14 chr20 9129629 9129660 -57538345 - L1ME4a LINE L1 -168 5953 5926 780 295 12 52 chr20 9129849 9129910 -57538095 - MIR SINE MIR 0 262 200 706 204 8 0 chr20 9129910 9130042 -57537963 - FLAM_C SINE Alu 0 133 1 780 295 12 52 chr20 9130042 9130231 -57537774 - MIR SINE MIR -62 200 22 463 235 10 0 chr20 9130289 9130391 -57537614 - MER5A DNA MER1_type -83 106 4 853 199 26 0 chr20 9131014 9131165 -57536840 + AluJb SINE Alu 128 282 -30 194 0 39 0 chr20 9131168 9131194 -57536811 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 192 330 22 33 chr20 9131690 9131781 -57536224 - MIR SINE MIR -115 147 58 877 261 11 14 chr20 9132062 9132346 -57535659 + L1MA9 LINE L1 5992 6274 -38 405 257 221 7 chr20 9132359 9132495 -57535510 - MER5A DNA MER1_type -15 174 10 911 201 34 0 chr20 9132502 9132681 -57535324 - MER5A DNA MER1_type -4 185 1 198 71 0 0 chr20 9133202 9133230 -57534775 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 250 331 71 31 chr20 9133337 9133464 -57534541 - L2 LINE L2 0 3313 3182 301 287 93 0 chr20 9133798 9133906 -57534099 - L1MC4 LINE L1 -1 8041 7924 2458 48 0 29 chr20 9134331 9134641 -57533364 - AluY SINE Alu -10 301 1 180 188 0 0 chr20 9135682 9135714 -57532291 + MIR SINE MIR 81 112 -150 2432 88 3 0 chr20 9135909 9136206 -57531799 + AluSx SINE Alu 1 298 -14 3080 123 34 38 chr20 9136287 9136791 -57531214 + MER1A DNA MER1_type 28 529 0 233 347 147 6 chr20 9138121 9138291 -57529714 - Charlie8 DNA MER1_type -2222 195 2 217 242 30 61 chr20 9138950 9139016 -57528989 - L2 LINE L2 -3 3269 3206 2270 112 62 69 chr20 9139105 9139553 -57528452 - MER65A LTR ERV1 0 445 1 905 229 8 68 chr20 9139572 9139808 -57528197 - MIR SINE MIR -26 236 15 289 267 172 36 chr20 9139812 9140033 -57527972 - MLT1H LTR MaLR -3 546 296 456 335 45 29 chr20 9140975 9141220 -57526785 - MIR SINE MIR -9 253 5 345 47 0 0 chr20 9141250 9141293 -57526712 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 202 363 110 7 chr20 9141341 9141487 -57526518 + L2 LINE L2 3104 3264 -8 2099 134 3 3 chr20 9141696 9141995 -57526010 + AluSx SINE Alu 1 299 -13 2277 230 58 16 chr20 9142196 9142874 -57525131 - L1MC4a LINE L1 -4 7804 7099 1881 99 4 0 chr20 9142885 9143158 -57524847 - AluSp SINE Alu 0 313 40 2077 140 3 10 chr20 9143294 9143602 -57524403 - AluSq SINE Alu -7 306 1 239 237 40 0 chr20 9144295 9144371 -57523634 + L1ME3A LINE L1 5535 5613 -508 1193 285 53 9 chr20 9144388 9144855 -57523150 + L1ME3A LINE L1 5677 6164 -6 1788 118 4 0 chr20 9144919 9145164 -57522841 - AluSx SINE Alu -15 297 52 991 73 0 0 chr20 9145164 9145287 -57522718 - AluSq/x SINE Alu -185 127 5 2127 92 7 10 chr20 9145324 9145619 -57522386 + AluSp SINE Alu 1 294 -19 365 296 47 12 chr20 9146413 9146582 -57521423 - MER104 DNA MER2_type -2 178 4 2074 101 10 49 chr20 9146603 9146776 -57521229 - AluSx SINE Alu -16 296 118 216 0 0 0 chr20 9146776 9146800 -57521205 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2012 124 3 7 chr20 9146800 9147083 -57520922 - AluSx SINE Alu -30 282 1 2074 101 10 49 chr20 9147083 9147216 -57520789 - AluSx SINE Alu -192 120 1 1966 138 0 10 chr20 9147279 9147575 -57520430 + AluSx SINE Alu 1 293 -19 522 307 74 6 chr20 9147607 9147770 -57520235 - MER91B DNA MER1_type -2 188 15 262 283 11 33 chr20 9147792 9147884 -57520121 - MIR SINE MIR -33 229 140 1342 221 91 19 chr20 9147888 9148305 -57519700 + LTR16A1 LTR ERVL 9 455 -2 348 261 84 8 chr20 9148316 9148435 -57519570 - MIR SINE MIR -127 135 8 1960 130 32 0 chr20 9149092 9149376 -57518629 - AluSx SINE Alu -19 293 1 681 311 115 26 chr20 9149523 9150114 -57517891 - L2 LINE L2 -3 3310 2666 255 198 247 0 chr20 9150168 9150249 -57517756 - MER5A DNA MER1_type -80 109 9 492 270 8 0 chr20 9150268 9150394 -57517611 - L2 LINE L2 -661 2653 2527 593 275 12 18 chr20 9150539 9150710 -57517295 - MER5A DNA MER1_type 0 189 20 1549 209 55 44 chr20 9151189 9151299 -57516706 - MLT1C LTR MaLR -2 465 358 1883 120 49 0 chr20 9151299 9151598 -57516407 + AluSg SINE Alu 1 312 0 1549 209 55 44 chr20 9151598 9151941 -57516064 - MLT1C LTR MaLR -109 358 6 364 331 15 0 chr20 9151946 9152079 -57515926 - MIR SINE MIR -44 218 84 35 24 0 0 chr20 9152651 9152693 -57515312 + AT_rich Low_complexity Low_complexity 1 42 0 2611 53 0 0 chr20 9153345 9153649 -57514356 - AluY SINE Alu -7 304 1 327 361 47 24 chr20 9153649 9153808 -57514197 - MIR3 SINE MIR -8 200 35 1491 117 168 91 chr20 9153826 9154201 -57513804 - MER4A LTR ERV1 0 664 261 562 124 10 10 chr20 9154201 9154298 -57513707 - MER4A LTR ERV1 -566 98 2 1153 152 39 76 chr20 9154470 9154800 -57513205 + MER33 DNA MER1_type 5 322 -2 309 26 0 0 chr20 9155259 9155297 -57512708 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 1595 156 25 32 chr20 9155299 9155581 -57512424 - AluJb SINE Alu -32 280 1 2461 88 10 0 chr20 9156048 9156356 -57511649 + AluSp SINE Alu 1 311 -2 2124 144 0 0 chr20 9157089 9157387 -57510618 + AluSx SINE Alu 1 298 -14 207 0 0 0 chr20 9158471 9158494 -57509511 + (T)n Simple_repeat Simple_repeat 1 23 0 200 176 0 0 chr20 9158710 9158744 -57509261 + L2 LINE L2 3267 3300 -13 400 278 119 0 chr20 9159099 9159225 -57508780 - MER5A DNA MER1_type -2 187 47 201 287 96 52 chr20 9159216 9159331 -57508674 + MER5A DNA MER1_type 70 189 0 * 743 314 13 8 chr20 9159539 9159775 -57508230 - MIR SINE MIR -16 246 10 594 162 80 14 chr20 9159908 9160065 -57507940 - L1MB8 LINE L1 -2 6176 6010 876 276 114 48 chr20 9160068 9160682 -57507323 - L2 LINE L2 0 3313 2676 2294 113 0 0 chr20 9160834 9161134 -57506871 + AluSx SINE Alu 1 300 -12 1740 135 117 30 chr20 9161149 9161482 -57506523 - THE1B LTR MaLR -2 362 1 186 380 28 0 chr20 9162620 9162691 -57505314 - L2 LINE L2 -14 3258 3186 252 0 0 0 chr20 9162905 9162933 -57505072 + (A)n Simple_repeat Simple_repeat 1 28 0 411 289 211 7 chr20 9162977 9163129 -57504876 + MER5A DNA MER1_type 4 186 -3 354 281 6 30 chr20 9163246 9163413 -57504592 - Charlie4 DNA MER1_type -1779 182 20 198 103 0 0 chr20 9163839 9163868 -57504137 + (CTTTG)n Simple_repeat Simple_repeat 3 31 0 278 304 18 27 chr20 9164191 9164303 -57503702 + MIR SINE MIR 96 206 -56 492 32 0 0 chr20 9164784 9164846 -57503159 + (CA)n Simple_repeat Simple_repeat 1 62 0 313 257 88 0 chr20 9164859 9164995 -57503010 - L1ME4a LINE L1 -218 5903 5756 2264 114 19 30 chr20 9165005 9165373 -57502632 - THE1B LTR MaLR 0 364 1 277 241 107 62 chr20 9165636 9165748 -57502257 + L2 LINE L2 3153 3269 -3 1490 178 7 18 chr20 9165782 9166063 -57501942 - AluJo SINE Alu -4 308 31 21 57 0 0 chr20 9167543 9167578 -57500427 + AT_rich Low_complexity Low_complexity 1 35 0 2091 132 0 0 chr20 9167678 9167974 -57500031 + AluSx SINE Alu 1 296 -16 598 237 116 0 chr20 9168638 9168802 -57499203 - MER5A DNA MER1_type 0 189 4 276 254 0 0 chr20 9168831 9168886 -57499119 + L2 LINE L2 3251 3305 -8 456 228 87 40 chr20 9169373 9169522 -57498483 - MER5B DNA MER1_type -9 169 14 500 272 39 53 chr20 9169916 9170082 -57497923 + MIR SINE MIR 34 198 -64 2244 94 3 50 chr20 9170082 9170401 -57497604 - AluSq SINE Alu -9 304 1 500 272 39 53 chr20 9170401 9170440 -57497565 + MIR SINE MIR 198 236 -26 2128 153 12 3 chr20 9170453 9170793 -57497212 - MER61A LTR ERV1 0 343 1 195 414 131 0 chr20 9171063 9171162 -57496843 - L2 LINE L2 -1 3271 3160 1635 186 0 20 chr20 9172505 9172811 -57495194 + AluJo SINE Alu 13 312 0 201 253 103 46 chr20 9173033 9173120 -57494885 + L2 LINE L2 3155 3246 -26 410 280 5 11 chr20 9173826 9173938 -57494067 - MER5B DNA MER1_type -16 173 49 26 50 0 0 chr20 9174552 9174592 -57493413 + AT_rich Low_complexity Low_complexity 1 40 0 934 307 89 20 chr20 9175295 9175848 -57492157 - MLT1L LTR MaLR -5 610 20 23 0 0 0 chr20 9176153 9176176 -57491829 + AT_rich Low_complexity Low_complexity 1 23 0 8434 59 6 9 chr20 9176788 9177863 -57490142 - MER11C LTR ERVK 0 1071 1 1485 102 5 14 chr20 9179086 9179302 -57488703 + AluSg/x SINE Alu 96 309 -3 24 0 0 0 chr20 9179804 9179828 -57488177 + AT_rich Low_complexity Low_complexity 1 24 0 365 241 69 28 chr20 9180444 9180589 -57487416 - L1MDa LINE L1 -4600 1529 1379 229 299 65 55 chr20 9180716 9181041 -57486964 - L1MDa LINE L1 -4897 1222 895 1932 161 0 10 chr20 9181309 9181608 -57486397 + AluSx SINE Alu 1 296 -16 305 250 169 12 chr20 9181737 9181897 -57486108 - MLT2F LTR ERVL 0 663 479 496 237 44 25 chr20 9181925 9181959 -57486046 - MLT2F LTR ERVL -310 353 321 264 59 0 0 chr20 9181959 9181993 -57486012 + (CA)n Simple_repeat Simple_repeat 2 35 0 496 237 44 25 chr20 9181993 9182262 -57485743 - MLT2F LTR ERVL -342 321 1 1895 161 9 9 chr20 9183100 9183435 -57484570 + MER2 DNA MER2_type 4 338 -7 232 231 0 0 chr20 9183837 9183889 -57484116 + (CA)n Simple_repeat Simple_repeat 1 52 0 950 262 100 57 chr20 9184270 9184988 -57483017 + L2 LINE L2 2559 3311 -2 468 258 151 19 chr20 9186548 9186707 -57481298 - MER5A DNA MER1_type 0 189 10 2138 99 3 0 chr20 9187170 9187490 -57480515 - AluSp SINE Alu 0 321 1 2341 82 3 38 chr20 9188105 9188422 -57479583 + AluSq SINE Alu 1 306 -7 311 285 162 8 chr20 9188968 9189147 -57478858 - MIR SINE MIR 0 262 42 208 176 0 0 chr20 9189258 9189292 -57478713 + MIR SINE MIR 113 146 -116 183 197 82 66 chr20 9190136 9190197 -57477808 - L2 LINE L2 -1 3312 3251 344 299 90 24 chr20 9190292 9190459 -57477546 + L3b LINE CR1 1284 1461 -122 331 238 0 0 chr20 9190975 9191038 -57476967 - L2 LINE L2 -5 3308 3246 792 181 6 33 chr20 9191084 9191266 -57476739 + MER3 DNA MER1_type 2 131 -78 190 319 88 11 chr20 9191364 9191455 -57476550 - L2 LINE L2 -180 3092 2995 1360 201 42 77 chr20 9191549 9191951 -57476054 - MLT1B LTR MaLR 0 390 3 810 169 21 11 chr20 9192191 9192380 -57475625 - MER63B DNA MER1_type 0 435 245 1606 163 10 43 chr20 9192405 9192705 -57475300 - AluJb SINE Alu -22 290 1 460 254 41 24 chr20 9192823 9192992 -57475013 - MER63B DNA MER1_type -264 172 1 189 264 28 69 chr20 9193633 9193705 -57474300 - MIR SINE MIR -76 132 64 581 295 106 44 chr20 9193972 9194079 -57473926 - L2 LINE L2 -1103 2211 2112 1889 156 0 29 chr20 9194079 9194387 -57473618 + AluJb SINE Alu 1 299 -13 581 295 106 44 chr20 9194387 9194753 -57473252 - L2 LINE L2 -1202 2112 1709 388 161 0 0 chr20 9194834 9194896 -57473109 - L1PA15-16 LINE L1 -5276 1573 1512 1830 163 14 7 chr20 9196945 9197240 -57470765 + AluJo SINE Alu 1 297 -15 363 154 0 0 chr20 9197896 9197961 -57470044 + (TCCA)n Simple_repeat Simple_repeat 4 68 0 297 0 0 0 chr20 9197975 9198008 -57469997 + (TG)n Simple_repeat Simple_repeat 2 34 0 226 250 33 0 chr20 9198220 9198280 -57469725 - MIR3 SINE MIR -39 169 108 748 267 84 5 chr20 9199592 9199959 -57468046 + HAL1 LINE L1 1256 1651 -856 275 268 12 24 chr20 9200776 9200858 -57467147 + L1ME3A LINE L1 445 525 -5594 343 250 60 20 chr20 9200870 9200970 -57467035 + HAL1 LINE L1 1330 1433 -1074 599 271 114 14 chr20 9201039 9201479 -57466526 + L1ME3A LINE L1 627 1110 -5009 24 0 0 0 chr20 9201967 9201991 -57466014 + AT_rich Low_complexity Low_complexity 1 24 0 847 289 72 26 chr20 9202098 9202145 -57465860 + L1ME3A LINE L1 4495 4538 -1591 1715 75 0 9 chr20 9202145 9202358 -57465647 + AluSg/x SINE Alu 88 298 -12 847 289 72 26 chr20 9202358 9202972 -57465033 + L1ME3A LINE L1 4538 5187 -942 373 219 10 42 chr20 9203017 9203113 -57464892 + MER2 DNA MER2_type 4 96 -249 266 272 0 2 chr20 9203120 9203215 -57464790 - L1M3 LINE L1 -542 5579 5489 29 28 0 0 chr20 9203346 9203382 -57464623 + AT_rich Low_complexity Low_complexity 1 36 0 394 141 106 0 chr20 9203394 9203479 -57464526 + MER2 DNA MER2_type 118 211 -134 258 200 50 12 chr20 9203598 9203678 -57464327 + (TTATA)n Simple_repeat Simple_repeat 4 86 0 1142 291 42 14 chr20 9203693 9204331 -57463674 + L1ME3A LINE L1 5281 5936 -217 24 32 0 0 chr20 9204565 9204596 -57463409 + AT_rich Low_complexity Low_complexity 1 31 0 2321 97 3 0 chr20 9204596 9204894 -57463111 + AluSg SINE Alu 1 299 -11 537 16 0 0 chr20 9204894 9204956 -57463049 + (TA)n Simple_repeat Simple_repeat 2 63 0 244 310 267 26 chr20 9205294 9205597 -57462408 + L2 LINE L2 2938 3313 0 391 284 10 29 chr20 9205695 9205797 -57462208 - L2 LINE L2 -4 3309 3210 1499 177 22 87 chr20 9206264 9206518 -57461487 - MER2 DNA MER2_type 0 344 120 2116 136 0 0 chr20 9206518 9206820 -57461185 - AluSx SINE Alu -10 302 1 1499 177 22 87 chr20 9206820 9206933 -57461072 - MER2 DNA MER2_type -224 120 1 1059 334 73 54 chr20 9208476 9209567 -57458438 - L2 LINE L2 -1 3312 2213 2516 65 0 3 chr20 9209613 9209921 -57458084 + AluY SINE Alu 3 309 -2 1007 198 10 10 chr20 9210876 9211083 -57456922 - MER3 DNA MER1_type 0 209 3 1209 229 36 0 chr20 9211096 9211401 -57456604 + MER58B DNA MER1_type 26 341 0 253 281 90 24 chr20 9212381 9212548 -57455457 + L1MC4 LINE L1 7864 8041 -1 451 284 226 26 chr20 9213571 9213877 -57454128 - L2 LINE L2 -340 2974 2608 1308 134 5 14 chr20 9214582 9214791 -57453214 + U17 snRNA snRNA 1 207 0 1059 183 0 6 chr20 9215032 9215207 -57452798 - AluJo SINE Alu -17 295 122 1015 49 28 0 chr20 9215268 9215412 -57452593 + (TTTC)n Simple_repeat Simple_repeat 1 148 0 292 173 0 0 chr20 9215412 9215464 -57452541 - MER66A LTR ERV1 -139 339 288 1014 237 137 60 chr20 9216358 9216531 -57451474 + MLT1D LTR MaLR 1 159 -346 2784 93 0 3 chr20 9216531 9216895 -57451110 - THE1B LTR MaLR 0 364 2 1014 237 137 60 chr20 9216895 9217189 -57450816 + MLT1D LTR MaLR 159 504 -1 782 289 116 34 chr20 9217471 9217752 -57450253 - L2 LINE L2 -8 3305 2974 1479 163 21 146 chr20 9217752 9217936 -57450069 - MLT2D LTR ERVL 0 414 209 2271 107 20 0 chr20 9217936 9218235 -57449770 + AluSx SINE Alu 7 311 -1 1479 163 21 146 chr20 9218235 9218523 -57449482 - MLT2D LTR ERVL -205 209 1 782 289 116 34 chr20 9218523 9218681 -57449324 - L2 LINE L2 -339 2974 2830 985 222 112 102 chr20 9219209 9219682 -57448323 - MLT1H LTR MaLR -4 545 68 235 224 0 0 chr20 9219710 9219759 -57448246 + MLT2B2 LTR ERVL 1 49 -466 287 146 0 0 chr20 9219820 9219868 -57448137 + MLT2D LTR ERVL 367 414 0 12470 194 42 10 chr20 9219869 9222898 -57445107 + ERVL-D LTR ERVL 2 3200 -2564 23 54 0 0 chr20 9223113 9223150 -57444855 + AT_rich Low_complexity Low_complexity 1 37 0 2147 107 31 0 chr20 9223155 9223444 -57444561 + AluSx SINE Alu 1 298 -14 2072 113 3 64 chr20 9224208 9224535 -57443470 - AluSq SINE Alu -6 307 1 31 26 0 0 chr20 9225633 9225671 -57442334 + AT_rich Low_complexity Low_complexity 1 38 0 1806 163 78 32 chr20 9225916 9226353 -57441652 - LTR2B LTR ERV1 0 490 34 493 107 0 0 chr20 9226426 9226501 -57441504 - MADE1 DNA Mariner 0 80 6 31 26 0 0 chr20 9227012 9227050 -57440955 + AT_rich Low_complexity Low_complexity 1 38 0 827 204 86 51 chr20 9227067 9227380 -57440625 - Charlie7 DNA MER1_type -193 2419 2096 * 873 254 144 22 chr20 9227368 9227832 -57440173 - Charlie7 DNA MER1_type -1854 758 238 757 199 33 13 chr20 9227834 9227985 -57440020 + FRAM SINE Alu 1 154 -12 2397 83 0 13 chr20 9228226 9228540 -57439465 + AluY SINE Alu 1 310 -1 356 215 98 78 chr20 9228681 9228817 -57439188 - L1M4 LINE L1 -3640 2506 2363 901 176 96 0 chr20 9228817 9229004 -57439001 - MER3 DNA MER1_type -4 205 1 356 215 98 78 chr20 9229004 9229072 -57438933 - L1M4 LINE L1 -3783 2363 2298 342 323 13 66 chr20 9229073 9229299 -57438706 + L1M4 LINE L1 2512 2725 -3421 2063 114 172 5 chr20 9229416 9229783 -57438222 - MSTA LTR MaLR 0 428 1 431 216 121 70 chr20 9229830 9230004 -57438001 - MER5A DNA MER1_type 0 189 6 270 322 34 39 chr20 9230102 9230307 -57437698 + MER102b DNA MER1_type 87 290 -51 767 213 58 35 chr20 9230363 9230537 -57437468 - MER5B DNA MER1_type 0 178 1 1486 233 149 67 chr20 9230929 9231238 -57436767 - MER21B LTR ERV1 -107 756 474 1247 184 66 63 chr20 9231238 9231602 -57436403 - MLT1A1 LTR MaLR 0 365 1 1486 233 149 67 chr20 9231602 9231991 -57436014 - MER21B LTR ERV1 -389 474 1 235 322 23 23 chr20 9232144 9232231 -57435774 - MER5A DNA MER1_type -95 94 8 385 226 123 123 chr20 9232622 9232791 -57435214 - MIR SINE MIR -16 246 78 2237 110 0 19 chr20 9232791 9233108 -57434897 + AluSx SINE Alu 1 311 -1 385 226 123 123 chr20 9233108 9233130 -57434875 - MIR SINE MIR -184 78 57 2416 78 0 0 chr20 9233130 9233425 -57434580 + AluSc SINE Alu 1 295 -14 385 226 123 123 chr20 9233425 9233475 -57434530 - MIR SINE MIR -204 58 4 1707 197 25 27 chr20 9233907 9234273 -57433732 + MLT1A1 LTR MaLR 1 365 0 465 264 31 21 chr20 9234430 9234623 -57433382 + Charlie8 DNA MER1_type 71 265 -2152 355 269 57 21 chr20 9234905 9235046 -57432959 + MER117 DNA MER1_type 6 151 -46 210 156 0 0 chr20 9235097 9235142 -57432863 + T-rich Low_complexity Low_complexity 1 45 0 648 202 193 14 chr20 9235278 9235496 -57432509 + L1ME3A LINE L1 5687 5943 -227 1138 229 134 25 chr20 9236651 9237053 -57430952 - L1ME3A LINE L1 -38 6132 5687 230 260 13 13 chr20 9239522 9239599 -57428406 + (TATATG)n Simple_repeat Simple_repeat 4 80 0 1887 123 0 4 chr20 9239766 9240035 -57427970 + AluSx SINE Alu 36 303 -9 411 200 234 11 chr20 9240036 9240211 -57427794 + L1ME3A LINE L1 5884 6097 -73 1153 226 67 81 chr20 9240236 9240657 -57427348 - MLT1H LTR MaLR 0 549 135 914 272 54 48 chr20 9240774 9241556 -57426449 - L1ME3A LINE L1 -318 5852 5068 180 0 0 0 chr20 9242310 9242330 -57425675 + (A)n Simple_repeat Simple_repeat 1 20 0 242 218 359 0 chr20 9242753 9242880 -57425125 - MER5A DNA MER1_type -3 186 4 305 274 247 68 chr20 9243430 9243620 -57424385 + MIR SINE MIR 29 252 -10 270 167 0 0 chr20 9244818 9244860 -57423145 + Alu SINE Alu 3 44 -256 2430 63 0 0 chr20 9244860 9245146 -57422859 + AluSc SINE Alu 14 299 -10 248 227 0 0 chr20 9245146 9245190 -57422815 + Alu SINE Alu 81 124 -178 24 0 0 0 chr20 9245437 9245461 -57422544 + AT_rich Low_complexity Low_complexity 1 24 0 1100 246 14 14 chr20 9246201 9246477 -57421528 - LTR16C LTR ERVL -1 490 215 818 235 16 5 chr20 9246832 9247019 -57420986 - MER5A DNA MER1_type 0 189 1 300 293 100 53 chr20 9247805 9247955 -57420050 + L2 LINE L2 3116 3272 0 601 313 20 15 chr20 9248882 9249080 -57418925 - MLT1J2 LTR MaLR 0 450 252 381 231 39 0 chr20 9249886 9249990 -57418015 + MER102b DNA MER1_type 48 155 -186 367 197 0 26 chr20 9251289 9251365 -57416640 + MIR SINE MIR 189 262 0 1927 142 0 7 chr20 9252043 9252331 -57415674 - AluSx SINE Alu -26 286 1 416 38 0 0 chr20 9252591 9252644 -57415361 - L1PA6 LINE L1 -4 6150 6098 592 279 87 98 chr20 9253056 9253575 -57414430 - MLT1H LTR MaLR -36 513 1 356 287 66 16 chr20 9253592 9253714 -57414291 + MIR3 SINE MIR 52 179 -29 612 200 160 27 chr20 9254319 9254469 -57413536 + MER5A DNA MER1_type 2 171 -18 22 0 0 0 chr20 9254590 9254612 -57413393 + AT_rich Low_complexity Low_complexity 1 22 0 358 341 23 0 chr20 9255266 9255398 -57412607 - MIR SINE MIR -44 218 84 26 0 0 0 chr20 9255560 9255586 -57412419 + AT_rich Low_complexity Low_complexity 1 26 0 427 294 129 76 chr20 9255854 9256289 -57411716 - L1MEd LINE L1 -5396 723 266 820 188 6 0 chr20 9257420 9257601 -57410404 + L1MA7 LINE L1 6100 6281 -10 294 29 0 0 chr20 9257623 9257658 -57410347 + (CA)n Simple_repeat Simple_repeat 2 36 0 386 245 130 74 chr20 9257681 9257950 -57410055 + L1MC4a LINE L1 6181 6464 -1344 325 266 78 8 chr20 9257973 9258101 -57409904 + L1MC4 LINE L1 7819 7955 -87 229 248 30 75 chr20 9258197 9258330 -57409675 - L1MC/D LINE L1 -2107 5701 5575 30 45 0 0 chr20 9258382 9258426 -57409579 + AT_rich Low_complexity Low_complexity 1 44 0 186 152 66 13 chr20 9258790 9258941 -57409064 + (TA)n Simple_repeat Simple_repeat 1 159 0 1085 286 63 38 chr20 9259961 9260482 -57407523 - MLT1H LTR MaLR -13 536 3 481 203 174 81 chr20 9260792 9261028 -57406977 + MER102b DNA MER1_type 84 341 0 23 0 0 0 chr20 9261343 9261366 -57406639 + AT_rich Low_complexity Low_complexity 1 23 0 267 19 38 57 chr20 9262098 9262151 -57405854 + (TTTTTA)n Simple_repeat Simple_repeat 4 55 0 25 0 0 0 chr20 9262159 9262184 -57405821 + AT_rich Low_complexity Low_complexity 1 25 0 2952 110 14 49 chr20 9262184 9262676 -57405329 - L1PA16 LINE L1 -9 6157 5683 608 257 45 14 chr20 9262724 9262946 -57405059 - MER46C DNA MER2_type -1 337 109 22 0 0 0 chr20 9263067 9263089 -57404916 + AT_rich Low_complexity Low_complexity 1 22 0 214 338 12 0 chr20 9263365 9263445 -57404560 + MER5A DNA MER1_type 25 105 -84 258 178 0 0 chr20 9263962 9264007 -57403998 + L1ME3A LINE L1 6066 6110 -60 2092 150 3 6 chr20 9264210 9264563 -57403442 - AluSx SINE Alu 0 352 1 684 125 59 88 chr20 9264564 9264700 -57403305 - AluSq/x SINE Alu -178 134 3 279 0 0 0 chr20 9264726 9264757 -57403248 + (TG)n Simple_repeat Simple_repeat 1 31 0 27 29 0 0 chr20 9266978 9267012 -57400993 + AT_rich Low_complexity Low_complexity 1 34 0 195 204 0 0 chr20 9268537 9268581 -57399424 + CT-rich Low_complexity Low_complexity 3 46 0 301 227 0 34 chr20 9268766 9268854 -57399151 - MLT1F LTR MaLR 0 542 458 7080 149 22 6 chr20 9268866 9271204 -57396801 - L1MA3 LINE L1 -11 6294 3920 1052 252 49 31 chr20 9271204 9271700 -57396305 - MLT1G1 LTR MaLR -70 520 1 264 322 127 0 chr20 9271940 9272058 -57395947 + L2 LINE L2 2976 3108 -164 445 295 50 54 chr20 9272066 9272344 -57395661 - MLT1H LTR MaLR 0 549 273 678 207 0 0 chr20 9272355 9272500 -57395505 + L1MB7 LINE L1 5789 5933 -251 583 223 36 14 chr20 9272502 9272641 -57395364 - MLT1H LTR MaLR -286 263 122 1454 172 0 111 chr20 9272946 9273329 -57394676 + AluJo SINE Alu 1 346 0 21 57 0 0 chr20 9273711 9273746 -57394259 + AT_rich Low_complexity Low_complexity 1 35 0 822 203 34 0 chr20 9273765 9273913 -57394092 - FRAM SINE Alu -31 145 1 3808 160 73 21 chr20 9273914 9274752 -57393253 - L1MB7 LINE L1 -6 6178 5298 266 227 50 42 chr20 9275204 9275323 -57392682 - MER104 DNA Tc2 -57 123 4 217 229 0 0 chr20 9275888 9275936 -57392069 - L2 LINE L2 -4 3309 3262 464 330 43 13 chr20 9276545 9276778 -57391227 - LTR16C LTR ERVL -155 336 97 691 341 77 10 chr20 9276980 9277279 -57390726 - MER115 DNA AcHobo -374 319 1 25 31 0 0 chr20 9277300 9277332 -57390673 + AT_rich Low_complexity Low_complexity 1 32 0 2486 167 5 32 chr20 9277341 9277779 -57390226 + MSTB LTR MaLR 1 426 0 267 262 24 54 chr20 9279084 9279252 -57388753 - L1MEd LINE L1 -5092 1027 865 482 71 14 0 chr20 9279618 9279688 -57388317 + Alu SINE Alu 232 302 -8 300 320 72 0 chr20 9279975 9280128 -57387877 - L1MEd LINE L1 -5920 199 36 215 288 62 25 chr20 9280722 9280802 -57387203 + L2 LINE L2 3231 3313 0 1252 260 74 44 chr20 9280807 9281334 -57386671 + MLT1H LTR MaLR 1 543 -6 235 346 58 10 chr20 9281377 9281481 -57386524 + MIR SINE MIR 19 127 -81 1760 71 4 0 chr20 9281923 9282149 -57385856 + AluY SINE Alu 85 311 0 673 326 96 47 chr20 9282403 9282450 -57385555 + LTR67 LTR ERVL 2 45 -512 2152 108 59 0 chr20 9282450 9282737 -57385268 - AluSx SINE Alu -8 304 1 673 326 96 47 chr20 9282737 9283219 -57384786 + LTR67 LTR ERVL 45 557 0 977 177 108 100 chr20 9283462 9283741 -57384264 + MLT1G LTR MaLR 54 375 -220 231 228 35 0 chr20 9283782 9283839 -57384166 + MER94 DNA DNA 75 133 -1 258 273 43 58 chr20 9284019 9284158 -57383847 - Charlie8 DNA MER1_type -2165 252 116 271 164 109 125 chr20 9284524 9284652 -57383353 - MLT1H LTR MaLR 0 549 424 22 0 0 0 chr20 9285609 9285631 -57382374 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr20 9286084 9286107 -57381898 + (T)n Simple_repeat Simple_repeat 1 23 0 1752 186 16 3 chr20 9286122 9286429 -57381576 + AluJo SINE Alu 1 311 -1 508 302 88 14 chr20 9286628 9286843 -57381162 + MIR SINE MIR 17 247 -15 1439 215 25 30 chr20 9286965 9287332 -57380673 + MLT1A1 LTR MaLR 1 365 0 1974 176 0 0 chr20 9288380 9288681 -57379324 + AluSx SINE Alu 5 305 -7 224 206 10 52 chr20 9289073 9289170 -57378835 + (TATAA)n Simple_repeat Simple_repeat 5 97 0 368 221 163 0 chr20 9289505 9289591 -57378414 + MER5A DNA MER1_type 7 106 -83 183 205 0 0 chr20 9290009 9290048 -57377957 + (ATG)n Simple_repeat Simple_repeat 2 40 0 1261 254 94 24 chr20 9291025 9291434 -57376571 + MLT1G1 LTR MaLR 1 429 -126 1182 275 97 26 chr20 9291434 9291940 -57376065 - MER34 LTR ERV1 0 542 1 1261 254 94 24 chr20 9291940 9292068 -57375937 + MLT1G1 LTR MaLR 429 547 -8 314 319 50 85 chr20 9292573 9292833 -57375172 - MER102b DNA MER1_type -5 336 86 * 1528 301 50 2 chr20 9292830 9293311 -57374694 - MLT1H LTR MaLR -4 545 42 1369 252 93 35 chr20 9293894 9294409 -57373596 - MLT1H LTR MaLR -2 547 3 264 244 13 26 chr20 9294915 9294993 -57373012 + MLT1K LTR MaLR 512 588 0 1828 241 47 27 chr20 9295060 9295502 -57372503 + L1ME3A LINE L1 5417 5876 -294 2408 124 5 16 chr20 9295502 9295881 -57372124 + THE1C LTR MaLR 1 375 0 1828 241 47 27 chr20 9295881 9296040 -57371965 + L1ME3A LINE L1 5876 6030 -140 272 146 0 0 chr20 9296060 9296115 -57371890 + L1ME3A LINE L1 6111 6165 -5 780 193 10 107 chr20 9297109 9297306 -57370699 + MER45A DNA AcHobo 1 178 0 1469 147 44 4 chr20 9297422 9297695 -57370310 - L1MB7 LINE L1 -19 6165 5882 1829 204 36 120 chr20 9297715 9298471 -57369534 + LTR8A LTR ERV1 36 727 0 568 329 135 31 chr20 9298631 9299208 -57368797 + L2 LINE L2 1686 2322 -992 2101 151 0 3 chr20 9299524 9299835 -57368170 + AluSx SINE Alu 1 310 -2 274 298 83 12 chr20 9300143 9300311 -57367694 + L2 LINE L2 3129 3308 -5 1606 167 3 61 chr20 9300798 9301127 -57366878 - AluJb SINE Alu -2 310 1 266 214 36 0 chr20 9301310 9301366 -57366639 - L2 LINE L2 0 3313 3256 2344 133 40 30 chr20 9301366 9301794 -57366211 + LTR26E LTR ERV1 1 432 -190 1486 233 149 67 chr20 9352186 9352495 -57315510 - MER21B LTR ERV1 -107 756 474 1247 184 66 63 chr20 9352495 9352859 -57315146 - MLT1A1 LTR MaLR 0 365 1 1486 233 149 67 chr20 9352859 9353248 -57314757 - MER21B LTR ERV1 -389 474 1 235 322 23 23 chr20 9353401 9353488 -57314517 - MER5A DNA MER1_type -95 94 8 385 226 123 123 chr20 9353879 9354048 -57313957 - MIR SINE MIR -16 246 78 2237 110 0 19 chr20 9354048 9354365 -57313640 + AluSx SINE Alu 1 311 -1 385 226 123 123 chr20 9354365 9354387 -57313618 - MIR SINE MIR -184 78 57 2416 78 0 0 chr20 9354387 9354682 -57313323 + AluSc SINE Alu 1 295 -14 385 226 123 123 chr20 9354682 9354732 -57313273 - MIR SINE MIR -204 58 4 1707 197 25 27 chr20 9355164 9355530 -57312475 + MLT1A1 LTR MaLR 1 365 0 465 264 31 21 chr20 9355687 9355880 -57312125 + Charlie8 DNA MER1_type 82 276 -2141 355 269 57 21 chr20 9356162 9356303 -57311702 + MER117 DNA MER1_type 6 151 -46 210 156 0 0 chr20 9356354 9356399 -57311606 + T-rich Low_complexity Low_complexity 1 45 0 648 202 193 14 chr20 9356535 9356753 -57311252 + L1ME3A LINE L1 5687 5943 -227 1138 229 134 25 chr20 9357908 9358310 -57309695 - L1ME3A LINE L1 -38 6132 5687 230 260 13 13 chr20 9360779 9360856 -57307149 + (TATATG)n Simple_repeat Simple_repeat 4 80 0 1887 123 0 4 chr20 9361023 9361292 -57306713 + AluSx SINE Alu 36 303 -9 411 200 234 11 chr20 9361293 9361468 -57306537 + L1ME3A LINE L1 5884 6097 -73 1153 226 67 81 chr20 9361493 9361914 -57306091 - MLT1H LTR MaLR 0 549 135 914 272 54 48 chr20 9362031 9362813 -57305192 - L1ME3A LINE L1 -318 5852 5068 180 0 0 0 chr20 9363567 9363587 -57304418 + (A)n Simple_repeat Simple_repeat 1 20 0 242 218 359 0 chr20 9364010 9364137 -57303868 - MER5A DNA MER1_type -3 186 4 305 274 247 68 chr20 9364687 9364877 -57303128 + MIR SINE MIR 29 252 -10 270 167 0 0 chr20 9366075 9366117 -57301888 + Alu SINE Alu 3 44 -255 2430 63 0 0 chr20 9366117 9366403 -57301602 + AluSc SINE Alu 14 299 -10 248 227 0 0 chr20 9366403 9366447 -57301558 + Alu SINE Alu 81 124 -178 24 0 0 0 chr20 9366694 9366718 -57301287 + AT_rich Low_complexity Low_complexity 1 24 0 1100 246 14 14 chr20 9367458 9367734 -57300271 - LTR16C LTR ERVL -1 490 215 818 235 16 5 chr20 9368089 9368276 -57299729 - MER5A DNA MER1_type 0 189 1 300 293 100 53 chr20 9369062 9369212 -57298793 + L2 LINE L2 3116 3272 0 601 313 20 15 chr20 9370139 9370337 -57297668 - MLT1J2 LTR MaLR 0 450 252 381 231 39 0 chr20 9371143 9371247 -57296758 + MER102b DNA MER1_type 48 155 -186 367 197 0 26 chr20 9372546 9372622 -57295383 + MIR SINE MIR 189 262 0 1927 142 0 7 chr20 9373300 9373588 -57294417 - AluSx SINE Alu -26 286 1 392 99 0 14 chr20 9373848 9373919 -57294086 - L1PA2 LINE L1 -4 6151 6082 592 279 87 98 chr20 9374313 9374832 -57293173 - MLT1H LTR MaLR -36 513 1 356 287 66 16 chr20 9374849 9374971 -57293034 + MIR3 SINE MIR 52 179 -29 612 200 160 27 chr20 9375576 9375726 -57292279 + MER5A DNA MER1_type 2 171 -18 22 0 0 0 chr20 9375847 9375869 -57292136 + AT_rich Low_complexity Low_complexity 1 22 0 358 341 23 0 chr20 9376523 9376655 -57291350 - MIR SINE MIR -44 218 84 26 0 0 0 chr20 9376817 9376843 -57291162 + AT_rich Low_complexity Low_complexity 1 26 0 427 294 129 76 chr20 9377111 9377546 -57290459 - L1MEd LINE L1 -5396 723 266 820 188 6 0 chr20 9378677 9378858 -57289147 + L1MA7 LINE L1 6100 6281 -10 294 29 0 0 chr20 9378880 9378915 -57289090 + (CA)n Simple_repeat Simple_repeat 2 36 0 386 245 130 74 chr20 9378938 9379207 -57288798 + L1MC4a LINE L1 6181 6464 -1344 325 266 78 8 chr20 9379230 9379358 -57288647 + L1MC4 LINE L1 7819 7955 -87 229 248 30 75 chr20 9379454 9379587 -57288418 - L1MC/D LINE L1 -2107 5701 5575 30 45 0 0 chr20 9379639 9379683 -57288322 + AT_rich Low_complexity Low_complexity 1 44 0 186 152 66 13 chr20 9380047 9380198 -57287807 + (TA)n Simple_repeat Simple_repeat 1 159 0 1085 286 63 38 chr20 9381218 9381739 -57286266 - MLT1H LTR MaLR -13 536 3 481 203 174 81 chr20 9382049 9382285 -57285720 + MER102b DNA MER1_type 84 341 0 23 0 0 0 chr20 9382600 9382623 -57285382 + AT_rich Low_complexity Low_complexity 1 23 0 267 19 38 57 chr20 9383355 9383408 -57284597 + (TTTTTA)n Simple_repeat Simple_repeat 4 55 0 25 0 0 0 chr20 9383416 9383441 -57284564 + AT_rich Low_complexity Low_complexity 1 25 0 2952 110 14 49 chr20 9383441 9383933 -57284072 - L1PA16 LINE L1 -9 6157 5683 608 257 45 14 chr20 9383981 9384203 -57283802 - MER46C DNA MER2_type -1 337 109 22 0 0 0 chr20 9384324 9384346 -57283659 + AT_rich Low_complexity Low_complexity 1 22 0 214 338 12 0 chr20 9384622 9384702 -57283303 + MER5A DNA MER1_type 25 105 -84 258 178 0 0 chr20 9385219 9385264 -57282741 + L1ME3A LINE L1 6066 6110 -60 2092 150 3 6 chr20 9385467 9385820 -57282185 - AluSx SINE Alu 0 352 1 684 125 59 88 chr20 9385821 9385957 -57282048 - AluSq/x SINE Alu -179 134 3 279 0 0 0 chr20 9385983 9386014 -57281991 + (TG)n Simple_repeat Simple_repeat 1 31 0 27 29 0 0 chr20 9388235 9388269 -57279736 + AT_rich Low_complexity Low_complexity 1 34 0 195 204 0 0 chr20 9389794 9389838 -57278167 + CT-rich Low_complexity Low_complexity 3 46 0 301 227 0 34 chr20 9390023 9390111 -57277894 - MLT1F LTR MaLR 0 542 458 7080 149 22 6 chr20 9390123 9392461 -57275544 - L1MA3 LINE L1 -11 6294 3920 1052 252 49 31 chr20 9392461 9392957 -57275048 - MLT1G1 LTR MaLR -70 520 1 264 322 127 0 chr20 9393197 9393315 -57274690 + L2 LINE L2 2976 3108 -164 445 295 50 54 chr20 9393323 9393601 -57274404 - MLT1H LTR MaLR 0 549 273 678 207 0 0 chr20 9393612 9393757 -57274248 + L1MB7 LINE L1 5789 5933 -251 583 223 36 14 chr20 9393759 9393898 -57274107 - MLT1H LTR MaLR -286 263 122 1454 172 0 111 chr20 9394203 9394586 -57273419 + AluJo SINE Alu 1 346 0 21 57 0 0 chr20 9394968 9395003 -57273002 + AT_rich Low_complexity Low_complexity 1 35 0 822 203 34 0 chr20 9395022 9395170 -57272835 - FRAM SINE Alu -31 145 1 3808 160 73 21 chr20 9395171 9396009 -57271996 - L1MB7 LINE L1 -6 6178 5298 266 227 50 42 chr20 9396461 9396580 -57271425 - MER104 DNA Tc2 -57 123 4 217 229 0 0 chr20 9397145 9397193 -57270812 - L2 LINE L2 -4 3309 3262 464 330 43 13 chr20 9397802 9398035 -57269970 - LTR16C LTR ERVL -155 336 97 691 341 77 10 chr20 9398237 9398536 -57269469 - MER115 DNA AcHobo -374 319 1 25 31 0 0 chr20 9398557 9398589 -57269416 + AT_rich Low_complexity Low_complexity 1 32 0 2486 167 5 32 chr20 9398598 9399036 -57268969 + MSTB LTR MaLR 1 426 0 267 262 24 54 chr20 9400341 9400509 -57267496 - L1MEd LINE L1 -5092 1027 865 482 71 14 0 chr20 9400875 9400945 -57267060 + Alu SINE Alu 233 303 -8 300 320 72 0 chr20 9401232 9401385 -57266620 - L1MEd LINE L1 -5920 199 36 215 288 62 25 chr20 9401979 9402059 -57265946 + L2 LINE L2 3231 3313 0 1252 260 74 44 chr20 9402064 9402591 -57265414 + MLT1H LTR MaLR 1 543 -6 235 346 58 10 chr20 9402634 9402738 -57265267 + MIR SINE MIR 19 127 -81 1760 71 4 0 chr20 9403180 9403406 -57264599 + AluY SINE Alu 85 311 0 673 326 96 47 chr20 9403660 9403707 -57264298 + LTR67 LTR ERVL 2 45 -512 2152 108 59 0 chr20 9403707 9403994 -57264011 - AluSx SINE Alu -8 304 1 673 326 96 47 chr20 9403994 9404476 -57263529 + LTR67 LTR ERVL 45 557 0 977 177 108 100 chr20 9404719 9404998 -57263007 + MLT1G LTR MaLR 54 375 -220 231 228 35 0 chr20 9405039 9405096 -57262909 + MER94 DNA DNA 75 133 -1 258 273 43 58 chr20 9405276 9405415 -57262590 - Charlie8 DNA MER1_type -2165 252 116 271 164 109 125 chr20 9405781 9405909 -57262096 - MLT1H LTR MaLR 0 549 424 22 0 0 0 chr20 9406866 9406888 -57261117 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr20 9407341 9407364 -57260641 + (T)n Simple_repeat Simple_repeat 1 23 0 1752 186 16 3 chr20 9407379 9407686 -57260319 + AluJo SINE Alu 1 311 -1 508 302 88 14 chr20 9407885 9408100 -57259905 + MIR SINE MIR 17 247 -15 1439 215 25 30 chr20 9408222 9408589 -57259416 + MLT1A1 LTR MaLR 1 365 0 1974 176 0 0 chr20 9409637 9409938 -57258067 + AluSx SINE Alu 5 305 -7 224 206 10 52 chr20 9410330 9410427 -57257578 + (TATAA)n Simple_repeat Simple_repeat 5 97 0 368 221 163 0 chr20 9410762 9410848 -57257157 + MER5A DNA MER1_type 7 106 -83 183 205 0 0 chr20 9411266 9411305 -57256700 + (ATG)n Simple_repeat Simple_repeat 2 40 0 2197 193 42 2 chr20 9412341 9412751 -57255254 - MSTB LTR MaLR 0 426 1 2397 65 0 3 chr20 9413014 9413323 -57254682 + AluY SINE Alu 1 308 -3 209 431 0 10 chr20 9413615 9413717 -57254288 + MER91A DNA MER1_type 2 102 -94 242 189 0 19 chr20 9414050 9414103 -57253902 + MLT1I LTR MaLR 94 145 -264 312 250 109 71 chr20 9414176 9414360 -57253645 + MLT1H LTR MaLR 358 548 -1 609 324 65 49 chr20 9414361 9414793 -57253212 - L2 LINE L2 -66 3247 2809 870 165 142 52 chr20 9415648 9415915 -57252090 + L1ME2 LINE L1 5855 6145 -19 485 129 11 0 chr20 9415952 9416045 -57251960 + GA-rich Low_complexity Low_complexity 3 96 0 536 128 0 0 chr20 9417183 9417261 -57250744 + MER5A DNA MER1_type 1 78 -111 462 250 32 16 chr20 9417321 9417445 -57250560 + MER5A DNA MER1_type 61 186 -3 834 247 69 100 chr20 9417460 9417881 -57250124 - MLT1J LTR MaLR -4 507 100 314 311 59 25 chr20 9418077 9418196 -57249809 - MIR3 SINE MIR -34 174 52 226 242 32 42 chr20 9419081 9419176 -57248829 - MLT1I LTR MaLR 0 409 316 301 304 40 0 chr20 9419345 9419470 -57248535 - MLT1I LTR MaLR -264 145 16 189 304 54 0 chr20 9419650 9419706 -57248299 - MIR3 SINE MIR -54 154 96 235 409 91 17 chr20 9421505 9421735 -57246270 + L2 LINE L2 2993 3239 -33 195 69 0 0 chr20 9422244 9422273 -57245732 + (GA)n Simple_repeat Simple_repeat 2 30 0 294 324 0 18 chr20 9422614 9422725 -57245280 + MIR SINE MIR 17 125 -137 244 250 21 21 chr20 9422736 9422832 -57245173 - L1MC5 LINE L1 -33 7928 7833 1360 215 23 39 chr20 9422833 9423266 -57244739 + L1MD3 LINE L1 7569 7994 -1 510 236 98 60 chr20 9423267 9423704 -57244301 - L1MC5 LINE L1 -118 7843 7390 521 266 152 6 chr20 9424054 9424212 -57243793 + MER5A DNA MER1_type 9 189 0 2788 83 13 0 chr20 9424440 9424836 -57243169 + MER41A LTR ERV1 1 401 -153 286 128 0 0 chr20 9424817 9424864 -57243141 + MER41B LTR ERV1 589 635 0 * 189 226 0 65 chr20 9424980 9425042 -57242963 - L3 LINE CR1 -311 1266 1209 3573 152 94 61 chr20 9425046 9425260 -57242745 + MER4D LTR ERV1 4 209 -694 1554 181 76 3 chr20 9425260 9425548 -57242457 - AluJo SINE Alu -3 309 1 3573 152 94 61 chr20 9425548 9426204 -57241801 + MER4D LTR ERV1 209 903 0 233 152 22 0 chr20 9426547 9426593 -57241412 + (CAA)n Simple_repeat Simple_repeat 2 48 0 262 226 45 73 chr20 9426627 9426804 -57241201 - L1MC5 LINE L1 -181 7780 7609 2114 126 10 0 chr20 9426879 9427173 -57240832 - AluSx SINE Alu -15 297 1 340 235 29 44 chr20 9427193 9427329 -57240676 - L1MC5 LINE L1 -492 7469 7336 1271 198 27 45 chr20 9427383 9427716 -57240289 + MLT1A1 LTR MaLR 1 327 -38 552 126 11 21 chr20 9427708 9427803 -57240202 + MLT1A1 LTR MaLR 272 365 0 * 199 323 32 21 chr20 9428043 9428136 -57239869 + MIR3 SINE MIR 104 197 -11 243 288 122 36 chr20 9428246 9428385 -57239620 - L2 LINE L2 0 3272 3122 2031 129 0 7 chr20 9428403 9428722 -57239283 + AluSx SINE Alu 1 317 0 2040 132 17 0 chr20 9428752 9429047 -57238958 - AluSq SINE Alu -13 300 1 786 180 145 25 chr20 9430563 9430763 -57237242 - MER58A DNA MER1_type 0 224 1 28 0 0 0 chr20 9430892 9430920 -57237085 + AT_rich Low_complexity Low_complexity 1 28 0 2840 65 3 0 chr20 9431042 9431409 -57236596 - L1PA8 LINE L1 -1 6171 5804 314 148 0 0 chr20 9431847 9431901 -57236104 + MER20 DNA MER1_type 3 56 -163 236 61 0 0 chr20 9431933 9431966 -57236039 - L1PA3 LINE L1 -7 6148 6116 767 152 45 0 chr20 9431966 9432098 -57235907 + MER20 DNA MER1_type 59 196 -23 691 282 158 11 chr20 9432116 9432382 -57235623 + MER115 DNA AcHobo 5 309 -384 187 200 44 0 chr20 9433568 9433613 -57234392 + L2 LINE L2 2685 2731 -583 1571 129 11 35 chr20 9433703 9433989 -57234016 + L1MB1 LINE L1 5878 6156 -12 634 134 34 8 chr20 9433993 9434112 -57233893 + L1MB1 LINE L1 6047 6168 0 558 258 59 48 chr20 9434137 9434323 -57233682 - MER58A DNA MER1_type -36 188 1 2477 64 0 0 chr20 9436465 9436763 -57231242 - AluY SINE Alu -13 298 1 216 182 0 0 chr20 9436928 9436972 -57231033 + (TA)n Simple_repeat Simple_repeat 2 45 0 1299 165 182 0 chr20 9437073 9437364 -57230641 + MER2 DNA MER2_type 1 344 0 573 170 75 201 chr20 9437422 9437586 -57230419 + L1MC4 LINE L1 7538 7721 -321 2174 143 0 0 chr20 9437586 9437880 -57230125 - AluSx SINE Alu -17 295 2 573 170 75 201 chr20 9437880 9438144 -57229861 + L1MC4 LINE L1 7721 7912 -130 252 204 153 0 chr20 9438228 9438326 -57229679 + L1MC4 LINE L1 7930 8042 0 561 233 104 28 chr20 9439657 9439945 -57228060 + L1MEd LINE L1 1306 1615 -4915 272 294 106 6 chr20 9439975 9440155 -57227850 + L1MEd LINE L1 1698 1895 -4826 8399 129 32 18 chr20 9440163 9441594 -57226411 - Tigger1 DNA MER2_type 0 2418 967 1035 177 154 71 chr20 9441595 9441861 -57226144 + AluJo SINE Alu 1 288 -14 396 189 33 16 chr20 9441861 9441983 -57226022 + GA-rich Low_complexity Low_complexity 2 125 0 5400 142 13 11 chr20 9441984 9442908 -57225097 - Tigger1 DNA MER2_type -1491 927 2 383 224 0 0 chr20 9442915 9443000 -57225005 + L1MEd LINE L1 1915 1999 -4722 22 35 0 0 chr20 9443069 9443098 -57224907 + AT_rich Low_complexity Low_complexity 1 29 0 3192 177 39 3 chr20 9443198 9444119 -57223886 + L1 LINE L1 4084 5087 -1059 334 275 21 63 chr20 9444470 9444612 -57223393 + L1MEd LINE L1 2444 2579 -3961 233 158 95 21 chr20 9444632 9444727 -57223278 + (TAAA)n Simple_repeat Simple_repeat 3 104 0 1097 178 198 31 chr20 9445257 9445515 -57222490 - AluJo SINE Alu 0 302 2 231 143 48 0 chr20 9446433 9446475 -57221530 + MIR SINE MIR 110 153 -109 945 189 29 0 chr20 9447798 9447973 -57220032 + MER5A DNA MER1_type 1 180 -9 296 287 99 10 chr20 9448192 9448293 -57219712 - MER5B DNA MER1_type -47 131 22 694 282 116 29 chr20 9448296 9448486 -57219519 + MLT1H LTR MaLR 1 173 -422 2796 139 19 0 chr20 9448486 9448910 -57219095 + MSTB1 LTR MaLR 1 432 0 694 282 116 29 chr20 9448910 9449221 -57218784 + MLT1H LTR MaLR 173 593 -2 2047 104 52 0 chr20 9449994 9450281 -57217724 + AluSx SINE Alu 1 302 -10 1710 158 29 18 chr20 9450281 9450558 -57217447 - AluJo SINE Alu -31 281 1 4016 147 15 26 chr20 9451228 9451281 -57216724 + MER50 LTR ERV1 1 53 -681 288 0 0 0 chr20 9451281 9451313 -57216692 + (CA)n Simple_repeat Simple_repeat 2 33 0 4016 147 15 26 chr20 9451313 9451981 -57216024 + MER50 LTR ERV1 53 714 -20 708 200 4 130 chr20 9453213 9453483 -57214522 - MER106A DNA MER1_type 0 236 1 785 234 81 90 chr20 9453925 9454259 -57213746 - MLT1H LTR MaLR 0 549 219 244 369 77 17 chr20 9454384 9454575 -57213430 + MIR3 SINE MIR 7 204 -58 2134 101 45 0 chr20 9454575 9454862 -57213143 - AluSx SINE Alu -12 300 1 275 338 78 7 chr20 9455749 9455891 -57212114 + MIR SINE MIR 111 262 0 509 0 0 16 chr20 9455895 9455957 -57212048 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 213 251 14 7 chr20 9455955 9455980 -57212025 + CT-rich Low_complexity Low_complexity 1 24 -421 * 2077 132 0 0 chr20 9455980 9456275 -57211730 - AluSx SINE Alu -17 295 1 213 251 14 7 chr20 9456275 9456397 -57211608 + CT-rich Low_complexity Low_complexity 24 445 0 795 179 12 13 chr20 9456567 9456801 -57211204 - MLT1A1 LTR MaLR -27 338 1 405 0 0 0 chr20 9456920 9456965 -57211040 + (A)n Simple_repeat Simple_repeat 1 45 0 2205 107 7 3 chr20 9457384 9457683 -57210322 - AluSx SINE Alu -12 300 1 246 224 13 26 chr20 9457963 9458039 -57209966 + MER90 LTR ERV1 88 162 -452 269 263 38 53 chr20 9458162 9458231 -57209774 + MER90 LTR ERV1 381 449 -165 1939 167 25 11 chr20 9458231 9458591 -57209414 + MLT1A1 LTR MaLR 1 365 0 269 263 38 53 chr20 9458591 9458654 -57209351 + MER90 LTR ERV1 449 511 -103 1840 169 0 20 chr20 9458723 9459019 -57208986 + AluJo SINE Alu 1 290 -22 1255 225 107 60 chr20 9459409 9459827 -57208178 - L1MC5 LINE L1 -36 7925 7528 2055 138 23 0 chr20 9459827 9460131 -57207874 - AluSx SINE Alu -1 311 1 1255 225 107 60 chr20 9460131 9460476 -57207529 - L1MC5 LINE L1 -433 7528 7126 321 336 82 16 chr20 9461076 9461198 -57206807 + L2 LINE L2 3122 3251 -21 485 300 41 6 chr20 9461236 9461259 -57206746 - MIR SINE MIR -45 217 196 1526 128 18 0 chr20 9461259 9461485 -57206520 + MER30 DNA MER1_type 1 230 0 485 300 41 6 chr20 9461485 9461631 -57206374 - MIR SINE MIR -66 196 42 2087 129 6 24 chr20 9462013 9462354 -57205651 + THE1B LTR MaLR 30 364 0 346 316 74 61 chr20 9463281 9463512 -57204493 - L2 LINE L2 0 3272 3039 230 135 39 0 chr20 9463522 9463574 -57204431 + CT-rich Low_complexity Low_complexity 3 56 0 238 292 26 26 chr20 9463911 9464024 -57203981 + L2 LINE L2 3112 3224 -89 321 130 188 0 chr20 9464083 9464152 -57203853 + L2 LINE L2 3230 3311 -2 549 288 187 9 chr20 9464458 9464677 -57203328 + MLT1H1 LTR MaLR 13 270 -285 273 186 17 17 chr20 9464717 9464776 -57203229 + MLT1H1 LTR MaLR 336 394 -196 301 366 170 0 chr20 9465180 9465404 -57202601 + MIR SINE MIR 1 262 0 596 57 23 0 chr20 9466698 9466786 -57201219 - L1PB1 LINE L1 -1 6150 6061 337 143 32 0 chr20 9467292 9467355 -57200650 + MLT1F1 LTR MaLR 70 134 -433 28 29 0 0 chr20 9467830 9467865 -57200140 + AT_rich Low_complexity Low_complexity 1 35 0 407 228 359 11 chr20 9467865 9468049 -57199956 - MIR SINE MIR -3 259 12 34 65 0 0 chr20 9468621 9468683 -57199322 + AT_rich Low_complexity Low_complexity 1 62 0 2132 144 0 0 chr20 9468756 9469068 -57198937 - AluSx SINE Alu 0 312 1 180 0 0 0 chr20 9469381 9469401 -57198604 + (A)n Simple_repeat Simple_repeat 1 20 0 824 206 29 12 chr20 9470949 9471119 -57196886 - MER5A DNA MER1_type -11 178 6 589 228 64 35 chr20 9471503 9471598 -57196407 - MER5A DNA MER1_type -5 184 80 2121 128 0 3 chr20 9471598 9471894 -57196111 - AluSx SINE Alu -5 307 13 589 228 64 35 chr20 9471894 9471969 -57196036 - MER5A DNA MER1_type -109 80 9 1216 264 53 48 chr20 9472413 9472848 -57195157 - LTR16A1 LTR ERVL -9 448 12 24 0 0 0 chr20 9473707 9473731 -57194274 + AT_rich Low_complexity Low_complexity 1 24 0 1511 252 72 82 chr20 9473979 9474430 -57193575 + L2 LINE L2 2248 2702 -611 1518 155 41 28 chr20 9474430 9474721 -57193284 + AluJo SINE Alu 1 295 -17 1511 252 72 82 chr20 9474721 9474732 -57193273 + L2 LINE L2 2702 2712 -601 2097 108 0 32 chr20 9474732 9475012 -57192993 + AluSg SINE Alu 1 271 -39 210 37 0 0 chr20 9475012 9475039 -57192966 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2097 108 0 32 chr20 9475039 9475072 -57192933 + AluSg SINE Alu 271 304 -6 1511 252 72 82 chr20 9475072 9475226 -57192779 + L2 LINE L2 2712 2866 -447 2080 138 0 0 chr20 9475226 9475516 -57192489 - AluSx SINE Alu -17 295 6 1511 252 72 82 chr20 9475516 9475947 -57192058 + L2 LINE L2 2866 3281 -32 199 306 12 71 chr20 9475992 9476077 -57191928 - L2 LINE L2 -42 3271 3192 749 232 48 43 chr20 9476081 9476163 -57191842 - MER3 DNA MER1_type -1 208 128 2227 124 0 0 chr20 9476163 9476469 -57191536 - AluSx SINE Alu -6 306 1 749 232 48 43 chr20 9476469 9476593 -57191412 - MER3 DNA MER1_type -81 128 1 551 273 31 0 chr20 9476603 9476731 -57191274 - MIR3 SINE MIR -41 167 36 1953 105 25 7 chr20 9477099 9477376 -57190629 + LTR8 LTR ERV1 1 282 -409 1601 104 68 12 chr20 9477376 9477625 -57190380 - AluSx SINE Alu -11 301 39 601 146 0 0 chr20 9477625 9477714 -57190291 + LTR8 LTR ERV1 603 691 0 405 240 31 0 chr20 9477871 9477967 -57190038 + LTR67 LTR ERVL 459 557 0 590 158 137 36 chr20 9478014 9478153 -57189852 - MSTB1 LTR MaLR -60 372 220 1213 181 116 80 chr20 9478178 9478691 -57189314 - MER34B LTR ERV1 -5 560 1 880 223 82 41 chr20 9479293 9479612 -57188393 + L1M4 LINE L1 2622 2953 -3193 30 59 0 0 chr20 9480260 9480311 -57187694 + AT_rich Low_complexity Low_complexity 1 51 0 2198 119 0 0 chr20 9480735 9481030 -57186975 + AluSx SINE Alu 1 295 -17 27 0 0 0 chr20 9481240 9481267 -57186738 + AT_rich Low_complexity Low_complexity 1 27 0 791 262 52 18 chr20 9481321 9481550 -57186455 + MLT1J2 LTR MaLR 37 273 -177 186 381 0 0 chr20 9481765 9481828 -57186177 - L2 LINE L2 -5 3308 3246 217 339 144 6 chr20 9481878 9482052 -57185953 + L2 LINE L2 2550 2747 -567 216 164 27 14 chr20 9482127 9482200 -57185805 + (TA)n Simple_repeat Simple_repeat 1 74 0 1351 274 57 9 chr20 9482211 9482631 -57185374 - MLT1J1 LTR MaLR 0 446 7 448 259 38 23 chr20 9483187 9483318 -57184687 - L2 LINE L2 -1 3312 3180 743 188 5 157 chr20 9483818 9483892 -57184113 + MER5A DNA MER1_type 1 85 -104 1609 176 0 15 chr20 9483892 9484159 -57183846 + AluSx SINE Alu 1 263 -49 743 188 5 157 chr20 9484159 9484307 -57183698 + MER5A DNA MER1_type 85 189 0 3948 89 42 0 chr20 9484500 9485027 -57182978 - L1PA13 LINE L1 -2 6161 5613 825 246 46 64 chr20 9485465 9485746 -57182259 + LTR16A1 LTR ERVL 61 336 -121 1819 149 54 3 chr20 9485991 9486286 -57181719 + AluJb SINE Alu 1 310 -2 1616 163 71 14 chr20 9486567 9486862 -57181143 + AluJo SINE Alu 1 312 0 2379 90 7 0 chr20 9487501 9487800 -57180205 - AluSp SINE Alu -12 301 1 404 257 50 56 chr20 9487832 9487890 -57180115 - MER104 DNA Tc2 -1720 178 121 3084 169 49 6 chr20 9487890 9488417 -57179588 + MER44D DNA MER2_type 1 605 0 404 257 50 56 chr20 9488417 9488537 -57179468 - MER104 DNA Tc2 -1777 121 1 428 264 113 61 chr20 9488551 9488763 -57179242 + MIR SINE MIR 15 237 -25 703 265 40 40 chr20 9488772 9489025 -57178980 + MLT1L LTR MaLR 7 259 -356 2333 95 0 40 chr20 9489160 9489486 -57178519 - AluSp SINE Alu 0 313 1 231 283 109 51 chr20 9489490 9489628 -57178377 + MLT1L LTR MaLR 453 598 -17 389 299 20 7 chr20 9489696 9489843 -57178162 + MIR SINE MIR 100 248 -14 346 289 56 71 chr20 9490003 9490226 -57177779 + MLT1I LTR MaLR 91 286 -123 253 261 72 0 chr20 9490317 9490386 -57177619 + MLT1J2 LTR MaLR 369 442 -8 205 146 42 0 chr20 9491001 9491049 -57176956 + A-rich Low_complexity Low_complexity 5 54 0 425 281 37 0 chr20 9492496 9492631 -57175374 - MIR SINE MIR -78 184 45 643 250 7 0 chr20 9492687 9492827 -57175178 + MER3 DNA MER1_type 64 204 -5 339 269 32 0 chr20 9492922 9493016 -57174989 - MIR SINE MIR -62 146 46 280 264 16 50 chr20 9493050 9493171 -57174834 - L1ME LINE L1 -332 5789 5673 23 54 0 0 chr20 9493352 9493389 -57174616 + AT_rich Low_complexity Low_complexity 1 37 0 4635 91 0 39 chr20 9493795 9494444 -57173561 + L1PB2 LINE L1 5524 6147 -4 23 0 0 0 chr20 9494444 9494467 -57173538 + AT_rich Low_complexity Low_complexity 1 23 0 2830 131 44 11 chr20 9494483 9494570 -57173435 - MER4C LTR ERV1 0 465 382 186 43 0 0 chr20 9494570 9494593 -57173412 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2830 131 44 11 chr20 9494593 9494955 -57173050 - MER4C LTR ERV1 -83 382 1 2169 110 0 0 chr20 9495375 9495685 -57172320 + AluSx SINE Alu 1 310 0 1557 152 29 63 chr20 9495751 9496067 -57171938 + MER44D DNA MER2_type 1 575 -34 549 190 50 0 chr20 9496081 9496181 -57171824 - MER96B DNA MER1_type? -309 108 4 2126 130 0 10 chr20 9496658 9496959 -57171046 + AluSx SINE Alu 1 298 -14 530 174 85 177 chr20 9497277 9497368 -57170637 + MLT1E2 LTR MaLR 1 99 -527 2142 116 0 16 chr20 9497368 9497678 -57170327 + AluSx SINE Alu 1 305 -7 530 174 85 177 chr20 9497678 9497868 -57170137 + MLT1E2 LTR MaLR 99 256 -370 231 250 0 0 chr20 9497871 9497910 -57170095 - Tigger1 DNA MER2_type 0 2418 2380 3187 115 87 18 chr20 9497910 9498405 -57169600 - MER1A DNA MER1_type 0 529 1 2293 172 28 16 chr20 9498405 9498841 -57169164 - Tigger1 DNA MER2_type -31 2387 1947 6049 88 52 6 chr20 9498847 9499697 -57168308 + L1PA10 LINE L1 5254 6142 -26 492 133 33 67 chr20 9499706 9499776 -57168229 - Tigger1 DNA MER2_type -1175 1243 1175 2321 101 0 0 chr20 9499776 9500074 -57167931 - AluY SINE Alu -13 298 1 492 133 33 67 chr20 9500074 9500093 -57167912 - Tigger1 DNA MER2_type -1243 1175 1157 336 117 0 17 chr20 9500111 9500171 -57167834 + L1PA8 LINE L1 6114 6172 0 5942 129 27 16 chr20 9500172 9500954 -57167051 - Tigger1 DNA MER2_type -460 1958 1186 2355 94 0 3 chr20 9500954 9501253 -57166752 - AluY SINE Alu -13 298 1 5942 129 27 16 chr20 9501253 9501276 -57166729 - Tigger1 DNA MER2_type -1232 1186 1165 2071 124 34 0 chr20 9501276 9501567 -57166438 - AluSx SINE Alu -11 301 1 5942 129 27 16 chr20 9501567 9502416 -57165589 - Tigger1 DNA MER2_type -1253 1165 1 1280 237 95 21 chr20 9502421 9502759 -57165246 + MLT1E2 LTR MaLR 264 626 0 245 250 0 0 chr20 9503058 9503110 -57164895 - MLT1J2 LTR MaLR -126 324 273 242 300 33 11 chr20 9503186 9503276 -57164729 - MLT1J2 LTR MaLR -291 159 68 198 0 0 0 chr20 9503279 9503301 -57164704 + (T)n Simple_repeat Simple_repeat 1 22 0 1197 213 12 24 chr20 9503382 9503636 -57164369 + AluJb SINE Alu 1 251 -61 2574 59 0 0 chr20 9503796 9504101 -57163904 - AluY SINE Alu -6 305 1 208 280 20 0 chr20 9505196 9505246 -57162759 - MIR SINE MIR -6 256 206 697 153 8 23 chr20 9505246 9505377 -57162628 + MLT2B2 LTR ERVL 1 129 -386 23 33 0 0 chr20 9506007 9506037 -57161968 + AT_rich Low_complexity Low_complexity 1 30 0 27 0 0 0 chr20 9506350 9506377 -57161628 + AT_rich Low_complexity Low_complexity 1 27 0 1827 128 21 40 chr20 9506447 9506775 -57161230 - MER1B DNA MER1_type 0 339 18 2074 206 28 32 chr20 9507095 9507591 -57160414 + MLT1D LTR MaLR 12 505 0 589 294 163 19 chr20 9508341 9508905 -57159100 + HAL1b LINE L1 1 645 -703 292 236 0 0 chr20 9509280 9509352 -57158653 + L1MC/D LINE L1 5768 5839 -1969 1944 120 55 0 chr20 9509555 9509830 -57158175 - AluSq SINE Alu -23 290 1 1158 116 29 0 chr20 9509838 9510011 -57157994 - L1MA4 LINE L1 -6 6294 6117 423 103 0 0 chr20 9510367 9510435 -57157570 + L1MA7 LINE L1 6224 6291 0 22 0 0 0 chr20 9510437 9510459 -57157546 + AT_rich Low_complexity Low_complexity 1 22 0 232 309 52 10 chr20 9510515 9510612 -57157393 - L2 LINE L2 -9 3304 3204 241 297 135 31 chr20 9510633 9510862 -57157143 + MLT1H LTR MaLR 1 253 -296 519 351 58 0 chr20 9511073 9511244 -57156761 - MER91A DNA MER1_type -15 181 1 1544 135 5 0 chr20 9511269 9511491 -57156514 - AluSx SINE Alu -89 223 1 2081 80 0 4 chr20 9511748 9512012 -57155993 + AluY SINE Alu 31 293 -18 21 36 0 0 chr20 9512128 9512156 -57155849 + AT_rich Low_complexity Low_complexity 1 28 0 238 167 0 0 chr20 9512893 9512929 -57155076 + polypyrimidine Low_complexity Low_complexity 5 40 0 622 97 29 0 chr20 9512929 9513032 -57154973 + CT-rich Low_complexity Low_complexity 3 108 0 2081 104 43 0 chr20 9513055 9513334 -57154671 - AluSx SINE Alu -21 291 1 967 228 39 7 chr20 9513394 9513653 -57154352 + L1ME3 LINE L1 5749 6011 -167 556 255 25 6 chr20 9513670 9513827 -57154178 + L1ME3 LINE L1 5989 6148 -14 2830 91 11 11 chr20 9515334 9515698 -57152307 + THE1B LTR MaLR 1 364 0 787 261 160 14 chr20 9515750 9516222 -57151783 + L2 LINE L2 2614 3156 -157 261 57 0 0 chr20 9516226 9516261 -57151744 + (GA)n Simple_repeat Simple_repeat 2 36 0 279 0 0 0 chr20 9516318 9516349 -57151656 + (TA)n Simple_repeat Simple_repeat 2 32 0 1905 157 3 10 chr20 9516349 9516648 -57151357 - AluSx SINE Alu -15 297 1 289 255 103 28 chr20 9516655 9516800 -57151205 + L2 LINE L2 3151 3306 -7 1634 142 28 28 chr20 9516836 9517118 -57150887 + AluJo SINE Alu 13 294 -18 384 236 5 5 chr20 9517419 9517516 -57150489 + MLT1H LTR MaLR 71 135 -274 648 252 46 0 chr20 9517658 9517809 -57150196 + MLT1H LTR MaLR 392 549 0 425 291 15 30 chr20 9517906 9518040 -57149965 + MIR3 SINE MIR 15 146 -62 518 155 24 0 chr20 9518093 9518177 -57149828 + MER5A DNA MER1_type 30 115 -74 2249 88 0 33 chr20 9518258 9518564 -57149441 - AluSq SINE Alu -17 296 1 308 289 102 8 chr20 9519366 9519494 -57148511 + MIR SINE MIR 102 241 -21 389 284 107 81 chr20 9519495 9519942 -57148063 + L1M2 LINE L1 675 1133 -5716 338 277 195 61 chr20 9519872 9520349 -57147656 - L1M2 LINE L1 -5722 1127 587 * 273 197 0 0 chr20 9520367 9520428 -57147577 + (CA)n Simple_repeat Simple_repeat 1 61 0 304 289 10 10 chr20 9524606 9524710 -57143295 + Charlie4a DNA MER1_type 1 104 -404 * 554 227 49 54 chr20 9524680 9524883 -57143122 + Charlie4a DNA MER1_type 238 439 -69 1541 189 7 22 chr20 9524883 9525158 -57142847 + AluJo SINE Alu 1 271 -41 23 33 0 0 chr20 9525163 9525193 -57142812 + AT_rich Low_complexity Low_complexity 1 30 0 368 238 89 10 chr20 9525393 9525494 -57142511 + MIR SINE MIR 44 152 -110 405 0 0 0 chr20 9526089 9526134 -57141871 + (CAAAA)n Simple_repeat Simple_repeat 3 47 0 467 371 48 0 chr20 9526303 9526513 -57141492 - MIR SINE MIR -37 225 6 523 255 35 78 chr20 9526966 9527197 -57140808 - Charlie8 DNA MER1_type -2196 221 1 2179 116 0 0 chr20 9527466 9527776 -57140229 + AluSx SINE Alu 1 310 0 761 248 110 64 chr20 9528216 9528671 -57139334 - L1ME4a LINE L1 -87 6034 5559 1877 170 3 0 chr20 9529256 9529562 -57138443 - AluJo SINE Alu -5 307 1 249 33 0 0 chr20 9529622 9529652 -57138353 + (TTTTC)n Simple_repeat Simple_repeat 4 33 0 1993 109 88 0 chr20 9529658 9529943 -57138062 - AluSx SINE Alu -2 310 1 477 274 52 37 chr20 9530494 9530845 -57137160 - LTR33 LTR ERVL 0 521 103 21 0 0 0 chr20 9531103 9531124 -57136881 + AT_rich Low_complexity Low_complexity 1 21 0 35 0 0 0 chr20 9531297 9531332 -57136673 + AT_rich Low_complexity Low_complexity 1 35 0 187 374 0 0 chr20 9531595 9531678 -57136327 - MIR3 SINE MIR -6 202 120 345 315 100 30 chr20 9531980 9532250 -57135755 + L2 LINE L2 2187 2475 -839 231 184 20 20 chr20 9532411 9532460 -57135545 - L2 LINE L2 -92 3221 3173 191 369 82 8 chr20 9532471 9532593 -57135412 + L2 LINE L2 2643 2773 -541 329 273 25 41 chr20 9532760 9532881 -57135124 + L2 LINE L2 2973 3091 -181 270 56 0 0 chr20 9534642 9534678 -57133327 + (CA)n Simple_repeat Simple_repeat 2 37 0 298 351 87 16 chr20 9534837 9535022 -57132983 - MIR SINE MIR -38 224 27 1152 174 5 28 chr20 9535040 9535252 -57132753 + MLT1B LTR MaLR 184 390 0 1945 70 0 4 chr20 9536112 9536353 -57131652 + AluY SINE Alu 61 300 -11 237 259 138 0 chr20 9537651 9537767 -57130238 + MIR SINE MIR 3 134 -128 * 455 237 89 37 chr20 9537761 9537896 -57130109 - MIR SINE MIR -71 191 50 242 309 37 12 chr20 9538063 9538144 -57129861 + MIR SINE MIR 35 117 -91 981 219 35 18 chr20 9538175 9538458 -57129547 - L1M4 LINE L1 -3716 2430 2143 249 139 0 0 chr20 9539444 9539487 -57128518 + (TTTTC)n Simple_repeat Simple_repeat 4 46 0 282 283 0 10 chr20 9540108 9540207 -57127798 + (TA)n Simple_repeat Simple_repeat 2 99 0 27 0 0 0 chr20 9540251 9540278 -57127727 + AT_rich Low_complexity Low_complexity 1 27 0 25 75 0 0 chr20 9540501 9540554 -57127451 + AT_rich Low_complexity Low_complexity 1 53 0 231 61 0 0 chr20 9541507 9541540 -57126465 + (TG)n Simple_repeat Simple_repeat 2 34 0 284 306 78 32 chr20 9542770 9542989 -57125016 + MIR SINE MIR 4 232 -30 373 269 179 53 chr20 9543850 9544207 -57123798 - MLT1J LTR MaLR 0 511 110 422 214 71 77 chr20 9545775 9545971 -57122034 - L1MC5 LINE L1 -6 7955 7761 1918 156 7 0 chr20 9548213 9548514 -57119491 - AluSx SINE Alu -9 303 1 189 0 0 0 chr20 9548514 9548535 -57119470 + (T)n Simple_repeat Simple_repeat 1 21 0 204 125 0 0 chr20 9549903 9549935 -57118070 + (TA)n Simple_repeat Simple_repeat 2 33 0 262 268 0 0 chr20 9549946 9550028 -57117977 + L1MC4 LINE L1 6614 6695 -1347 255 284 0 0 chr20 9549962 9550050 -57117955 - L1MC4 LINE L1 -1341 6701 6614 * 267 103 0 0 chr20 9550199 9550238 -57117767 + (TA)n Simple_repeat Simple_repeat 1 39 0 664 203 84 55 chr20 9550686 9550888 -57117117 - MER3 DNA MER1_type -1 208 1 557 157 0 0 chr20 9551664 9551747 -57116258 - FRAM SINE Alu -21 155 73 249 315 0 0 chr20 9552797 9552870 -57115135 + MLT1J1 LTR MaLR 364 436 -10 2174 124 0 0 chr20 9553128 9553426 -57114579 - AluSx SINE Alu -14 298 1 896 47 0 0 chr20 9554308 9554414 -57113591 - AluYa5/8 SINE Alu -14 296 191 1675 214 60 13 chr20 9554468 9554931 -57113074 - Charlie1b DNA MER1_type -1 522 38 1560 248 125 15 chr20 9555261 9555732 -57112273 - MLT1G1 LTR MaLR 0 595 73 23 0 0 0 chr20 9556253 9556276 -57111729 + AT_rich Low_complexity Low_complexity 1 23 0 686 315 100 53 chr20 9556374 9557524 -57110481 + L1ME LINE L1 4245 5450 -816 589 76 0 0 chr20 9557524 9557603 -57110402 - MADE1 DNA Mariner 0 80 2 686 315 100 53 chr20 9557603 9557676 -57110329 + L1ME LINE L1 5450 5518 -748 728 238 107 16 chr20 9557713 9557812 -57110193 - MER5C DNA MER1_type -52 272 183 237 65 0 0 chr20 9557812 9557843 -57110162 + (CA)n Simple_repeat Simple_repeat 2 32 0 728 238 107 16 chr20 9557843 9557987 -57110018 - MER5C DNA MER1_type -141 183 7 438 281 154 15 chr20 9557987 9558254 -57109751 + L1ME LINE L1 5519 5822 -299 426 221 16 16 chr20 9558254 9558381 -57109624 - L1MC5 LINE L1 -20 7941 7815 2354 273 98 32 chr20 9558471 9559779 -57108226 - L2 LINE L2 0 3313 1927 433 124 11 11 chr20 9560137 9560226 -57107779 + (GA)n Simple_repeat Simple_repeat 1 89 0 285 281 117 23 chr20 9561154 9561282 -57106723 + MIR3 SINE MIR 69 208 0 23 0 0 0 chr20 9561321 9561344 -57106661 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr20 9561481 9561513 -57106492 + AT_rich Low_complexity Low_complexity 1 32 0 300 224 232 8 chr20 9562101 9562226 -57105779 - L1ME4a LINE L1 0 6121 5969 22 35 0 0 chr20 9563023 9563052 -57104953 + AT_rich Low_complexity Low_complexity 1 29 0 2237 108 7 0 chr20 9563538 9563835 -57104170 - AluSx SINE Alu -13 299 1 2247 108 0 0 chr20 9565213 9565500 -57102505 + AluSx SINE Alu 1 287 -25 25 0 0 0 chr20 9566642 9566667 -57101338 + AT_rich Low_complexity Low_complexity 1 25 0 2050 20 20 0 chr20 9566715 9566959 -57101046 - L1PA4 LINE L1 -1 6154 5906 22 35 0 0 chr20 9567110 9567139 -57100866 + AT_rich Low_complexity Low_complexity 1 29 0 234 91 0 0 chr20 9567416 9567449 -57100556 + (TG)n Simple_repeat Simple_repeat 1 33 0 229 275 29 0 chr20 9567614 9567683 -57100322 + (TA)n Simple_repeat Simple_repeat 1 71 0 674 276 63 37 chr20 9567938 9568401 -57099604 - L1M4 LINE L1 -1461 4685 4211 519 310 62 18 chr20 9568431 9568705 -57099300 - L1ME4a LINE L1 -331 5790 5505 854 314 64 31 chr20 9568723 9569331 -57098674 + L2 LINE L2 2601 3239 -74 1553 11 0 0 chr20 9569382 9569560 -57098445 - L1PA2 LINE L1 -30 6125 5948 305 65 0 0 chr20 9569560 9569596 -57098409 + L1PA4 LINE L1 6110 6155 0 1013 176 70 12 chr20 9569689 9569946 -57098059 - MER33 DNA MER1_type -62 262 1 192 152 0 0 chr20 9569988 9570021 -57097984 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 558 118 0 12 chr20 9571624 9571709 -57096296 - AluS SINE Alu -228 84 1 340 235 97 46 chr20 9573558 9573775 -57094230 - L1ME4a LINE L1 -161 5960 5733 23 0 0 0 chr20 9574702 9574725 -57093280 + AT_rich Low_complexity Low_complexity 1 23 0 180 111 0 0 chr20 9574982 9575009 -57092996 + (TAGG)n Simple_repeat Simple_repeat 1 27 0 1421 211 42 15 chr20 9575130 9575462 -57092543 - MER58B DNA MER1_type 0 341 1 1412 191 53 18 chr20 9575507 9575790 -57092215 + AluJo SINE Alu 3 295 -17 22 0 0 0 chr20 9576463 9576485 -57091520 + AT_rich Low_complexity Low_complexity 1 22 0 244 255 60 40 chr20 9576918 9577067 -57090938 - L1ME4a LINE L1 -29 6092 5941 400 330 89 6 chr20 9577097 9577276 -57090729 - L2 LINE L2 -17 3296 3103 231 114 0 0 chr20 9577286 9577321 -57090684 + (TG)n Simple_repeat Simple_repeat 2 36 0 312 266 106 45 chr20 9577338 9577650 -57090355 - L1ME4a LINE L1 -202 5919 5589 377 280 193 13 chr20 9578441 9578591 -57089414 - MER5A DNA MER1_type 0 189 13 22 70 0 0 chr20 9578645 9578688 -57089317 + AT_rich Low_complexity Low_complexity 1 43 0 531 45 0 0 chr20 9578920 9578986 -57089019 + (TCTA)n Simple_repeat Simple_repeat 1 66 0 2122 103 0 7 chr20 9578987 9579268 -57088737 - AluSx SINE Alu -33 279 1 2405 136 67 12 chr20 9579281 9579685 -57088320 + MSTB LTR MaLR 1 426 0 1630 136 124 12 chr20 9579711 9579969 -57088036 - AluSx SINE Alu -25 287 1 2826 122 9 2 chr20 9579973 9580434 -57087571 - L1MB3 LINE L1 -45 6138 5675 239 330 91 0 chr20 9580435 9580523 -57087482 + LTR16C LTR ERVL 29 124 -367 935 241 43 18 chr20 9580558 9580840 -57087165 + LTR16C LTR ERVL 193 481 -10 450 167 0 0 chr20 9582525 9582609 -57085396 + CT-rich Low_complexity Low_complexity 2 85 0 566 265 70 25 chr20 9583239 9583439 -57084566 + MLT1H1 LTR MaLR 346 554 -1 219 36 0 0 chr20 9583562 9583590 -57084415 + (TG)n Simple_repeat Simple_repeat 1 28 0 884 172 25 105 chr20 9584083 9584321 -57083684 + MER20 DNA MER1_type 1 219 0 1981 154 3 0 chr20 9584550 9584848 -57083157 - AluSx SINE Alu -13 299 1 478 275 66 0 chr20 9585364 9585531 -57082474 - MER5B DNA MER1_type 0 178 1 21 0 0 0 chr20 9585612 9585633 -57082372 + AT_rich Low_complexity Low_complexity 1 21 0 216 232 145 0 chr20 9586715 9586784 -57081221 - MIR SINE MIR -76 132 54 473 298 19 25 chr20 9587189 9587347 -57080658 - MIR3 SINE MIR -26 182 26 1112 236 31 12 chr20 9587487 9587813 -57080192 - LTR16C LTR ERVL 0 491 160 1035 225 165 29 chr20 9588097 9588551 -57079454 + LTR33 LTR ERVL 2 517 -4 240 357 18 120 chr20 9589100 9589442 -57078563 - L2 LINE L2 -3 3269 2963 1123 266 85 28 chr20 9590485 9590978 -57077027 - MLT1G1 LTR MaLR 0 595 75 258 289 167 42 chr20 9591407 9591743 -57076262 + L2 LINE L2 2934 3311 -2 2381 153 65 0 chr20 9591759 9592159 -57075846 + MSTB LTR MaLR 1 426 0 214 320 68 59 chr20 9593062 9593284 -57074721 - L2 LINE L2 -213 3059 2836 1468 288 76 10 chr20 9593866 9594630 -57073375 + L2 LINE L2 2491 3312 -1 549 200 0 0 chr20 9595829 9595934 -57072071 + FLAM_A SINE Alu 37 141 -1 659 195 0 7 chr20 9595940 9596089 -57071916 + GA-rich Low_complexity Low_complexity 3 150 0 214 254 16 16 chr20 9596921 9596984 -57071021 + (TCCA)n Simple_repeat Simple_repeat 1 63 0 1387 178 159 0 chr20 9597745 9598065 -57069940 - MER93b LTR ERV1 0 373 3 390 196 21 10 chr20 9598440 9598537 -57069468 + MER103 DNA DNA 1 98 -68 559 255 135 85 chr20 9598668 9599173 -57068832 - MLT1H LTR MaLR -16 533 4 333 303 25 37 chr20 9599365 9599527 -57068478 - MIR3 SINE MIR -5 203 44 859 231 101 75 chr20 9600313 9600751 -57067254 + LTR33A LTR ERVL 73 521 -2 508 295 32 6 chr20 9600883 9601039 -57066966 + MIR SINE MIR 2 161 -101 694 268 0 18 chr20 9601052 9601220 -57066785 - LTR16A LTR ERVL -10 440 276 376 311 12 25 chr20 9601261 9601422 -57066583 - LTR16A LTR ERVL -290 160 2 439 251 169 5 chr20 9601837 9602032 -57065973 - MIR SINE MIR -12 250 24 1464 176 106 3 chr20 9602325 9602637 -57065368 - MER2 DNA MER2_type 0 344 1 2713 79 6 3 chr20 9602637 9602989 -57065016 + THE1A LTR MaLR 1 355 0 11482 103 6 3 chr20 9602989 9604565 -57063440 + THE1A-int LTR MaLR 1 1580 0 2522 96 8 3 chr20 9604565 9604918 -57063087 + THE1A LTR MaLR 1 355 0 554 264 45 0 chr20 9605535 9605690 -57062315 - MLT1J LTR MaLR -349 162 1 215 204 74 19 chr20 9605890 9605944 -57062061 - L2 LINE L2 -1 3312 3256 483 70 70 0 chr20 9606022 9606108 -57061897 + CT-rich Low_complexity Low_complexity 2 93 0 975 99 0 0 chr20 9606108 9606249 -57061756 + (TTCC)n Simple_repeat Simple_repeat 2 142 0 2943 110 5 0 chr20 9606250 9606679 -57061326 - L1PB3 LINE L1 -16 6138 5708 316 317 0 0 chr20 9606680 9606784 -57061221 - MLT1H LTR MaLR -445 104 1 479 238 135 0 chr20 9607633 9607759 -57060246 - MIR SINE MIR -82 180 38 417 153 0 0 chr20 9608101 9608173 -57059832 + CT-rich Low_complexity Low_complexity 3 74 0 817 178 53 13 chr20 9609073 9609225 -57058780 + FRAM SINE Alu 1 158 -18 900 213 25 15 chr20 9609228 9609430 -57058575 - MIR SINE MIR -13 249 46 725 266 118 43 chr20 9609463 9609554 -57058451 + MER113 DNA MER1_type? 1 84 -437 1825 172 0 10 chr20 9609554 9609850 -57058155 - AluSx SINE Alu -19 293 1 725 266 118 43 chr20 9609850 9610242 -57057763 + MER113 DNA MER1_type? 84 520 -1 28 48 0 0 chr20 9611079 9611121 -57056884 + AT_rich Low_complexity Low_complexity 1 42 0 443 311 8 0 chr20 9611607 9611726 -57056279 + L2 LINE L2 3152 3271 -1 362 320 59 26 chr20 9612393 9612546 -57055459 - MIR SINE MIR -98 164 7 207 239 221 26 chr20 9612673 9612786 -57055219 - MIR SINE MIR -127 135 1 281 224 0 13 chr20 9613080 9613156 -57054849 - ALR/Alpha Satellite centromeric -66 106 32 22 35 0 0 chr20 9613159 9613188 -57054817 + AT_rich Low_complexity Low_complexity 1 29 0 567 232 130 16 chr20 9614185 9614370 -57053635 + MER63A DNA MER1_type 5 210 0 257 279 65 19 chr20 9614931 9615085 -57052920 - HAL1b LINE L1 -442 906 746 193 200 0 0 chr20 9615498 9615538 -57052467 + L2 LINE L2 3228 3267 -5 414 225 34 0 chr20 9615623 9615712 -57052293 - MIR SINE MIR -88 174 83 25 0 0 0 chr20 9615834 9615859 -57052146 + AT_rich Low_complexity Low_complexity 1 25 0 333 278 35 0 chr20 9616822 9616937 -57051068 - MER103 DNA DNA -1 165 47 372 22 0 0 chr20 9617071 9617116 -57050889 + (TG)n Simple_repeat Simple_repeat 2 46 0 668 113 0 0 chr20 9618458 9618555 -57049450 + L1MC1 LINE L1 6237 6333 0 486 253 158 19 chr20 9619753 9619911 -57048094 - MER5A DNA MER1_type 0 189 10 1743 125 4 8 chr20 9620607 9620863 -57047142 + AluSx SINE Alu 21 275 -37 360 0 0 0 chr20 9620867 9620907 -57047098 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 306 279 43 43 chr20 9621041 9621181 -57046824 - L1MC5 LINE L1 -50 7911 7772 354 246 43 22 chr20 9621277 9621415 -57046590 - L1ME2 LINE L1 -19 6145 6005 1403 196 160 20 chr20 9624715 9625114 -57042891 - MLT1D LTR MaLR 0 505 51 198 0 0 0 chr20 9625409 9625431 -57042574 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1534 164 18 31 chr20 9625440 9625726 -57042279 - AluJb SINE Alu -30 282 1 947 165 6 0 chr20 9626375 9626533 -57041472 + MER5A DNA MER1_type 28 186 -3 1752 236 77 33 chr20 9627139 9627750 -57040255 - L1ME1 LINE L1 -5 6161 5524 204 270 14 27 chr20 9627824 9627898 -57040107 + (CATATA)n Simple_repeat Simple_repeat 5 77 0 456 283 172 20 chr20 9629002 9629246 -57038759 + Charlie2 DNA MER1_type 25 305 -2557 1227 221 151 34 chr20 9629289 9629318 -57038687 + Charlie2 DNA MER1_type 1963 1987 -875 2107 118 0 7 chr20 9629318 9629629 -57038376 + AluSq SINE Alu 1 309 0 1227 221 151 34 chr20 9629629 9630402 -57037603 + Charlie2 DNA MER1_type 1987 2860 -2 953 190 23 9 chr20 9630671 9630887 -57037118 + MLT1D LTR MaLR 287 505 0 299 294 33 0 chr20 9631063 9631155 -57036850 + MIR3 SINE MIR 105 199 -9 1425 187 29 64 chr20 9632720 9633095 -57034910 - MLT1A2 LTR MaLR -12 362 1 255 309 82 0 chr20 9633310 9633407 -57034598 + L2 LINE L2 3209 3313 0 21 0 0 0 chr20 9635030 9635051 -57032954 + AT_rich Low_complexity Low_complexity 1 21 0 359 192 14 0 chr20 9635079 9635152 -57032853 - MER116 DNA Mariner 0 80 7 198 0 0 0 chr20 9635881 9635903 -57032102 + (A)n Simple_repeat Simple_repeat 1 22 0 1445 176 72 14 chr20 9636205 9636484 -57031521 - AluJo SINE Alu -17 295 1 1131 260 162 15 chr20 9636645 9637408 -57030597 + L2 LINE L2 2451 3312 -1 1936 125 26 22 chr20 9638244 9638555 -57029450 - AluSx SINE Alu 0 312 1 739 263 224 21 chr20 9639312 9639731 -57028274 - L2 LINE L2 -1 3312 2809 308 204 0 45 chr20 9639741 9639829 -57028176 - MER20 DNA MER1_type -6 213 130 947 164 0 75 chr20 9640765 9640873 -57027132 - MER20 DNA MER1_type -22 197 111 1539 185 41 41 chr20 9640873 9641236 -57026769 - MLT1A1 LTR MaLR 0 365 3 947 164 0 75 chr20 9641236 9641340 -57026665 - MER20 DNA MER1_type -108 111 1 459 259 175 34 chr20 9641407 9641502 -57026503 - L2 LINE L2 -646 2668 2588 1736 135 104 32 chr20 9641502 9641849 -57026156 + THE1C LTR MaLR 2 373 -2 459 259 175 34 chr20 9641849 9642050 -57025955 - L2 LINE L2 -726 2588 2330 457 289 58 13 chr20 9642074 9642230 -57025775 - MIR SINE MIR -80 182 20 1186 206 70 96 chr20 9642477 9642851 -57025154 + MLT1A1 LTR MaLR 2 365 0 22 0 0 0 chr20 9643162 9643184 -57024821 + AT_rich Low_complexity Low_complexity 1 22 0 359 225 9 99 chr20 9643689 9643800 -57024205 + MER45 DNA AcHobo 1 101 -1480 664 132 0 0 chr20 9643800 9643906 -57024099 - AluJb SINE Alu -5 307 202 1051 170 72 16 chr20 9643908 9644102 -57023903 + AluJb SINE Alu 98 302 -10 182 326 130 11 chr20 9644211 9644303 -57023702 + MER5A DNA MER1_type 65 167 -22 449 108 15 0 chr20 9644356 9644421 -57023584 - L2 LINE L2 0 3313 3248 1031 262 108 22 chr20 9644433 9644795 -57023210 - LTR16C LTR ERVL -9 482 90 242 281 11 45 chr20 9644849 9644938 -57023067 - L2 LINE L2 -217 3096 3011 2464 60 0 22 chr20 9645686 9646000 -57022005 + AluY SINE Alu 1 307 -4 313 200 29 0 chr20 9646541 9646611 -57021394 - MER5A DNA MER1_type -114 75 4 2593 169 39 31 chr20 9646618 9647134 -57020871 + MLT2B1 LTR ERVL 1 520 0 194 299 146 6 chr20 9647944 9648108 -57019897 + MIR SINE MIR 76 262 0 1096 185 70 38 chr20 9648573 9648887 -57019118 + MER33 DNA MER1_type 1 324 0 2460 93 3 0 chr20 9648975 9649287 -57018718 + AluSq SINE Alu 1 313 0 1241 292 60 24 chr20 9651546 9652158 -57015847 + L2 LINE L2 2469 3104 -209 208 244 189 0 chr20 9652781 9652871 -57015134 + MIR SINE MIR 48 154 -108 2560 223 54 25 chr20 9652949 9653667 -57014338 + L1ME1 LINE L1 5425 6163 -3 216 0 0 0 chr20 9654338 9654362 -57013643 + (TA)n Simple_repeat Simple_repeat 2 25 0 430 225 70 21 chr20 9654845 9654987 -57013018 - MIR SINE MIR -17 245 97 234 0 0 0 chr20 9655059 9655085 -57012920 + (T)n Simple_repeat Simple_repeat 1 26 0 2100 100 0 14 chr20 9655664 9655944 -57012061 - AluSx SINE Alu -36 276 1 1011 161 27 103 chr20 9656084 9656286 -57011719 + MER33 DNA MER1_type 20 236 -2349 1834 199 28 40 chr20 9656286 9656709 -57011296 + MER47B DNA MER2_type 1 418 0 1011 161 27 103 chr20 9656709 9656738 -57011267 + MER33 DNA MER1_type 236 266 -2319 2595 165 67 2 chr20 9656738 9657258 -57010747 - L1MD2 LINE L1 -13 6346 5793 1011 161 27 103 chr20 9657258 9657355 -57010650 + MER33 DNA MER1_type 266 324 0 309 51 0 0 chr20 9657565 9657604 -57010401 + (T)n Simple_repeat Simple_repeat 1 39 0 1945 108 4 0 chr20 9658154 9658414 -57009591 + AluSg SINE Alu 37 297 -13 220 349 119 0 chr20 9659224 9659333 -57008672 - MER91 DNA MER1_type 0 190 75 646 294 88 13 chr20 9659444 9659672 -57008333 + MIR SINE MIR 18 262 0 1984 177 0 3 chr20 9659811 9660122 -57007883 - AluJo SINE Alu -2 310 1 558 161 145 8 chr20 9660637 9660761 -57007244 + MLT1E1 LTR MaLR 7 147 -507 1044 169 105 63 chr20 9660810 9661048 -57006957 + MLT1E1 LTR MaLR 224 535 -119 1852 58 0 5 chr20 9661048 9661271 -57006734 + AluY SINE Alu 86 307 -4 1044 169 105 63 chr20 9661271 9661397 -57006608 + MLT1E1 LTR MaLR 535 654 0 449 283 104 36 chr20 9661761 9662047 -57005958 - Charlie8 DNA MER1_type -2141 276 7 482 246 18 9 chr20 9662106 9662216 -57005789 + L2 LINE L2 3198 3308 -5 314 284 107 45 chr20 9662458 9662656 -57005349 - MIR3 SINE MIR -52 210 3 450 238 175 28 chr20 9662664 9662807 -57005198 + MER5A DNA MER1_type 26 189 0 383 235 88 7 chr20 9663240 9663376 -57004629 + MLT1H LTR MaLR 8 154 -395 232 270 14 0 chr20 9663468 9663542 -57004463 + MLT1H LTR MaLR 475 549 0 23 0 0 0 chr20 9664005 9664028 -57003977 + AT_rich Low_complexity Low_complexity 1 23 0 3503 182 89 45 chr20 9664116 9664410 -57003595 - L1MB7 LINE L1 0 6184 5904 2215 136 0 16 chr20 9664410 9664726 -57003279 - AluSx SINE Alu -1 311 1 3503 182 89 45 chr20 9664726 9665712 -57002293 - L1MB7 LINE L1 -280 5904 4858 297 0 0 0 chr20 9665842 9665875 -57002130 + (CA)n Simple_repeat Simple_repeat 2 34 0 455 225 18 36 chr20 9666424 9666535 -57001470 - L2 LINE L2 0 3272 3164 307 232 289 37 chr20 9666621 9666811 -57001194 + MIR SINE MIR 12 249 -13 22 0 0 0 chr20 9666914 9666936 -57001069 + AT_rich Low_complexity Low_complexity 1 22 0 2420 58 0 29 chr20 9667465 9667798 -57000207 - AluY SINE Alu 0 311 1 1929 142 0 17 chr20 9667798 9668086 -56999919 - AluSx SINE Alu -29 283 1 2192 111 13 3 chr20 9669388 9669686 -56998319 - AluSg SINE Alu -9 301 1 2329 63 14 0 chr20 9670469 9670756 -56997249 + AluY SINE Alu 1 291 -20 1985 104 21 17 chr20 9671636 9671923 -56996082 + AluSx SINE Alu 1 288 -24 774 219 65 77 chr20 9672296 9672664 -56995341 - LTR16A1 LTR ERVL -1 474 111 771 11 0 0 chr20 9673304 9673392 -56994613 + (TTTTA)n Simple_repeat Simple_repeat 2 89 0 1611 181 11 18 chr20 9673392 9673674 -56994331 - AluJo SINE Alu -32 280 1 674 156 119 132 chr20 9673742 9674069 -56993936 - MER33 DNA MER1_type 0 324 2 371 160 27 0 chr20 9674007 9674082 -56993923 - MER3 DNA MER1_type -97 112 36 465 265 12 35 chr20 9674631 9674801 -56993204 - MLT1F LTR MaLR -7 535 370 306 263 103 32 chr20 9674867 9675023 -56992982 - MLT1F LTR MaLR -298 292 126 488 242 0 0 chr20 9675033 9675132 -56992873 - Tigger7 DNA MER2_type 0 2587 2489 * 862 221 119 18 chr20 9675130 9675356 -56992649 - Tigger7 DNA MER2_type -466 267 19 21 36 0 0 chr20 9676493 9676521 -56991484 + AT_rich Low_complexity Low_complexity 1 28 0 2061 195 60 71 chr20 9678179 9679085 -56988920 - L1M3 LINE L1 -622 5558 4670 24 53 0 0 chr20 9679106 9679144 -56988861 + AT_rich Low_complexity Low_complexity 1 38 0 204 182 0 0 chr20 9679937 9679981 -56988024 + (TATATG)n Simple_repeat Simple_repeat 4 47 0 231 236 18 0 chr20 9680339 9680394 -56987611 + MIR SINE MIR 207 262 0 1271 111 28 0 chr20 9680975 9681156 -56986849 - L1PA11 LINE L1 -2 6172 5987 1642 164 49 80 chr20 9681255 9681645 -56986360 - MLT1B LTR MaLR -12 378 1 1398 218 155 15 chr20 9681797 9682191 -56985814 - MLT1H LTR MaLR 0 549 101 21 0 0 0 chr20 9682249 9682270 -56985735 + AT_rich Low_complexity Low_complexity 1 21 0 1934 205 21 34 chr20 9683009 9683540 -56984465 + L1ME1 LINE L1 5569 6092 -74 884 297 82 45 chr20 9684580 9685068 -56982937 - L2 LINE L2 -1 3312 2807 1399 306 120 36 chr20 9685164 9685941 -56982064 - L2 LINE L2 -591 2723 1882 1045 335 97 10 chr20 9686028 9686639 -56981366 - L2 LINE L2 -1917 1397 734 484 292 49 5 chr20 9687255 9687440 -56980565 - L1ME3A LINE L1 -41 6129 5937 308 216 108 10 chr20 9688417 9688519 -56979486 - L1ME3 LINE L1 0 6162 6051 693 191 69 12 chr20 9688736 9688909 -56979096 + MER5A DNA MER1_type 4 186 -3 366 221 29 10 chr20 9689015 9689119 -56978886 + MER103 DNA DNA 25 130 -36 754 198 24 61 chr20 9690659 9690871 -56977134 - MER39 LTR ERV1 0 707 504 2000 155 43 33 chr20 9690890 9691436 -56976569 - MLT2A2 LTR ERVL 0 554 1 635 204 159 11 chr20 9691436 9691611 -56976394 - MER39 LTR ERV1 -247 460 260 282 73 0 0 chr20 9692668 9692709 -56975296 + (CA)n Simple_repeat Simple_repeat 1 41 0 1149 241 157 25 chr20 9693047 9693479 -56974526 - MLT1H LTR MaLR -20 529 41 941 194 11 11 chr20 9694002 9694182 -56973823 + MER5A DNA MER1_type 2 181 -8 790 158 16 43 chr20 9694252 9694436 -56973569 + MER53 DNA DNA 10 188 -1 249 328 153 11 chr20 9694440 9694617 -56973388 + L3b LINE CR1 1102 1303 -280 646 236 62 50 chr20 9694982 9695240 -56972765 + MIR SINE MIR 2 262 0 965 209 43 70 chr20 9696309 9696610 -56971395 - MLT1H LTR MaLR -199 350 58 855 225 130 57 chr20 9696618 9697017 -56970988 + MLT1D LTR MaLR 4 412 -55 1345 116 6 0 chr20 9697032 9697213 -56970792 - AluSg SINE Alu -128 182 1 308 191 0 29 chr20 9697213 9697281 -56970724 + MLT1D LTR MaLR 402 467 0 280 170 19 0 chr20 9697281 9697334 -56970671 - MLT1H LTR MaLR -491 58 5 315 45 0 0 chr20 9697588 9697632 -56970373 + MADE1 DNA Mariner 37 80 0 1386 248 70 4 chr20 9698097 9698568 -56969437 - Charlie4a DNA MER1_type -2 506 5 23 86 0 0 chr20 9699168 9699226 -56968779 + AT_rich Low_complexity Low_complexity 1 58 0 198 191 0 0 chr20 9699443 9699485 -56968520 + (TA)n Simple_repeat Simple_repeat 1 42 0 1419 207 59 77 chr20 9700068 9700505 -56967500 - MLT1D LTR MaLR 0 505 62 789 41 0 0 chr20 9700505 9700602 -56967403 - L1PA4 LINE L1 -3 6152 6056 1729 148 39 28 chr20 9700602 9700886 -56967119 - AluJo SINE Alu -25 287 1 1419 207 59 77 chr20 9700886 9700999 -56967006 - MLT1D LTR MaLR -441 64 1 186 350 140 13 chr20 9701049 9701206 -56966799 + L2 LINE L2 3137 3313 0 323 346 55 45 chr20 9701836 9702038 -56965967 - MIR SINE MIR -36 226 23 483 303 148 0 chr20 9702541 9702696 -56965309 + MER5A DNA MER1_type 12 189 0 257 254 0 0 chr20 9702796 9702851 -56965154 - MLT1L LTR MaLR -216 399 345 1302 189 61 21 chr20 9703047 9703423 -56964582 - MER3 DNA MER1_type 0 2624 2234 403 226 113 0 chr20 9703431 9703546 -56964459 - MER3 DNA MER1_type -87 122 42 524 224 0 0 chr20 9703556 9703654 -56964351 + MER5A DNA MER1_type 9 106 -83 551 272 6 50 chr20 9703706 9703863 -56964142 + MER5B DNA MER1_type 6 156 -22 2359 194 60 22 chr20 9703863 9704364 -56963641 + MLT2B1 LTR ERVL 1 520 0 551 272 6 50 chr20 9704364 9704386 -56963619 + MER5B DNA MER1_type 156 177 -1 2084 141 0 10 chr20 9705694 9706000 -56962005 + AluSx SINE Alu 1 303 -9 458 261 30 0 chr20 9706814 9706948 -56961057 + MER46C DNA MER2_type 59 196 -142 1120 208 9 0 chr20 9706948 9707164 -56960841 - MER58A DNA MER1_type -1 223 6 350 251 56 105 chr20 9707473 9707693 -56960312 - MLT1L LTR MaLR -73 542 226 23 0 0 0 chr20 9709122 9709145 -56958860 + AT_rich Low_complexity Low_complexity 1 23 0 281 324 41 12 chr20 9709156 9709400 -56958605 + HAL1 LINE L1 1018 1268 -1239 2379 96 0 0 chr20 9709716 9710018 -56957987 + AluSg SINE Alu 1 302 -8 336 296 22 7 chr20 9710026 9710161 -56957844 + HAL1 LINE L1 1520 1656 -851 320 319 42 42 chr20 9710640 9710784 -56957221 + HAL1b LINE L1 756 899 -449 1140 180 38 17 chr20 9710987 9711276 -56956729 + MER33 DNA MER1_type 25 319 -5 287 307 0 9 chr20 9711828 9711942 -56956063 + (TA)n Simple_repeat Simple_repeat 1 113 0 279 122 0 0 chr20 9713580 9713629 -56954376 + (TGAG)n Simple_repeat Simple_repeat 4 52 0 556 179 0 0 chr20 9714696 9714798 -56953207 + MER5A DNA MER1_type 4 105 -84 766 205 12 29 chr20 9715996 9716167 -56951838 - MER5B DNA MER1_type -3 175 8 251 331 14 47 chr20 9716217 9716365 -56951640 - MER5A DNA MER1_type -42 147 5 2149 142 0 0 chr20 9716482 9716792 -56951213 + AluSx SINE Alu 1 310 -2 304 301 39 39 chr20 9716859 9717015 -56950990 + MIR3 SINE MIR 51 206 -2 721 220 81 0 chr20 9717085 9717258 -56950747 + MER5A DNA MER1_type 1 187 -2 390 260 169 7 chr20 9717439 9717543 -56950462 + MER5A DNA MER1_type 11 97 -92 266 68 45 0 chr20 9717543 9717587 -56950418 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 390 260 169 7 chr20 9717587 9717636 -56950369 + MER5A DNA MER1_type 97 189 0 28 29 0 0 chr20 9718762 9718797 -56949208 + AT_rich Low_complexity Low_complexity 1 35 0 1690 140 70 104 chr20 9718982 9719425 -56948580 + MSTC LTR MaLR 1 428 0 235 269 35 78 chr20 9720593 9720734 -56947271 + MLT1K LTR MaLR 204 338 -250 299 145 32 16 chr20 9720962 9721024 -56946981 - LTR33A LTR ERVL -21 502 440 955 261 72 14 chr20 9721482 9721831 -56946174 - L1ME1 LINE L1 -22 6144 5776 446 304 135 14 chr20 9722578 9722785 -56945220 - MIR SINE MIR -22 240 9 1703 169 6 47 chr20 9723176 9723495 -56944510 + AluJo SINE Alu 1 306 -6 890 253 30 17 chr20 9724520 9724753 -56943252 - MIR SINE MIR -8 254 19 330 280 45 8 chr20 9724767 9724899 -56943106 - L2 LINE L2 -170 3102 2966 399 21 0 0 chr20 9724957 9725005 -56943000 + (TG)n Simple_repeat Simple_repeat 2 49 0 505 309 71 54 chr20 9725029 9725379 -56942626 - L2 LINE L2 -494 2820 2465 2618 88 11 0 chr20 9726359 9726710 -56941295 - THE1A LTR MaLR 0 355 1 227 305 24 37 chr20 9726775 9726857 -56941148 - MIR SINE MIR -109 99 19 227 218 0 0 chr20 9726963 9727017 -56940988 + MER5A DNA MER1_type 3 56 -133 373 348 76 31 chr20 9727032 9727256 -56940749 - MIR SINE MIR -14 248 15 653 233 93 48 chr20 9727357 9727670 -56940335 - MLT1J1 LTR MaLR -11 435 109 260 207 0 0 chr20 9728034 9728097 -56939908 + MER5A DNA MER1_type 3 65 -124 835 182 34 0 chr20 9728097 9728245 -56939760 + FRAM SINE Alu 21 173 -3 264 242 253 0 chr20 9728247 9728346 -56939659 + MER5A DNA MER1_type 66 189 0 235 264 253 22 chr20 9730148 9730239 -56937766 - L2 LINE L2 -1 3312 3201 288 317 17 17 chr20 9731113 9731293 -56936712 - L1ME4a LINE L1 -223 5898 5719 525 358 17 0 chr20 9732394 9732570 -56935435 + MIR SINE MIR 12 190 -72 21 0 0 0 chr20 9732724 9732745 -56935260 + AT_rich Low_complexity Low_complexity 1 21 0 380 266 127 76 chr20 9734096 9734371 -56933634 - MLT1H LTR MaLR -222 327 39 291 350 150 31 chr20 9734830 9735056 -56932949 + L2 LINE L2 3000 3252 -20 1081 292 91 19 chr20 9735250 9735778 -56932227 - L2 LINE L2 0 3313 2749 227 336 80 7 chr20 9739254 9739391 -56928614 + MIR3 SINE MIR 30 176 -32 * 250 331 172 38 chr20 9739377 9739773 -56928232 - L3 LINE CR1 -364 1213 765 538 244 15 15 chr20 9742206 9742337 -56925668 - MIR3 SINE MIR -66 142 12 2037 140 20 0 chr20 9744078 9744378 -56923627 + AluSx SINE Alu 1 306 -6 213 65 0 0 chr20 9744393 9744424 -56923581 + (CAGAGA)n Simple_repeat Simple_repeat 4 34 0 466 161 40 27 chr20 9744427 9744576 -56923429 + GA-rich Low_complexity Low_complexity 4 154 0 411 73 0 0 chr20 9744651 9744706 -56923299 + (GGGAA)n Simple_repeat Simple_repeat 2 56 0 297 167 0 0 chr20 9744708 9744762 -56923243 + Alu SINE Alu 240 293 -9 318 50 0 0 chr20 9744771 9744811 -56923194 + (GGAA)n Simple_repeat Simple_repeat 4 43 0 279 0 0 0 chr20 9744904 9744935 -56923070 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 189 360 116 12 chr20 9744941 9745027 -56922978 - L2 LINE L2 -52 3220 3126 757 201 65 0 chr20 9745969 9746138 -56921867 - MER5A DNA MER1_type -6 183 4 2283 38 0 0 chr20 9746872 9747162 -56920843 - L1PA4 LINE L1 -1163 4983 4694 7592 27 1 1 chr20 9747162 9748302 -56919703 + L1PA4 LINE L1 5015 6154 -1 1696 92 4 8 chr20 9748569 9748809 -56919196 + L1PB1 LINE L1 5912 6150 -1 469 220 90 14 chr20 9749257 9749421 -56918584 + MER39 LTR ERV1 6 183 -359 * 1363 208 39 12 chr20 9749389 9749726 -56918279 + MER39 LTR ERV1 357 702 -5 21 71 0 0 chr20 9749996 9750038 -56917967 + AT_rich Low_complexity Low_complexity 1 42 0 264 212 95 83 chr20 9750585 9750849 -56917156 - L1ME4a LINE L1 -2 6119 5853 321 303 145 0 chr20 9750915 9751149 -56916856 - L1ME4a LINE L1 -280 5841 5574 1341 219 146 32 chr20 9752138 9752576 -56915429 - MLT1D LTR MaLR -17 488 1 24 32 0 0 chr20 9754136 9754167 -56913838 + AT_rich Low_complexity Low_complexity 1 31 0 2917 136 3 46 chr20 9754524 9755089 -56912916 - L1MA7 LINE L1 -201 6090 5550 22 35 0 0 chr20 9756135 9756164 -56911841 + AT_rich Low_complexity Low_complexity 1 29 0 1218 39 13 0 chr20 9756172 9756327 -56911678 - L1PA4 LINE L1 -2 6153 5997 21 0 0 0 chr20 9756794 9756815 -56911190 + AT_rich Low_complexity Low_complexity 1 21 0 493 350 67 30 chr20 9757043 9757372 -56910633 - HAL1 LINE L1 -910 1597 1257 1887 120 0 39 chr20 9757413 9757696 -56910309 - AluSx SINE Alu -39 273 2 1642 186 55 6 chr20 9758165 9758492 -56909513 - MER61A LTR ERV1 0 343 1 477 0 0 0 chr20 9758776 9758829 -56909176 + (CA)n Simple_repeat Simple_repeat 2 54 0 23 0 0 0 chr20 9759218 9759241 -56908764 + AT_rich Low_complexity Low_complexity 1 23 0 519 240 16 8 chr20 9759356 9759477 -56908528 - MIR SINE MIR -13 249 128 240 197 33 16 chr20 9760221 9760282 -56907723 - L1ME4a LINE L1 -95 6026 5965 461 369 53 36 chr20 9760326 9760859 -56907146 + L2 LINE L2 2688 3229 -43 1941 164 0 6 chr20 9761710 9762021 -56905984 + AluY SINE Alu 1 309 -2 754 212 63 5 chr20 9763115 9763304 -56904701 + MER3 DNA MER1_type 10 209 0 483 48 0 0 chr20 9763635 9763697 -56904308 + (CA)n Simple_repeat Simple_repeat 2 63 0 836 243 34 80 chr20 9763920 9764398 -56903607 - LTR37B LTR ERV1 -2 466 11 1525 104 0 0 chr20 9766154 9766347 -56901658 - AluSp SINE Alu -14 299 107 752 287 45 80 chr20 9766627 9766932 -56901073 - L2 LINE L2 -39 3274 2991 2132 120 0 32 chr20 9766932 9767241 -56900764 + AluSx SINE Alu 1 299 -13 752 287 45 80 chr20 9767241 9767423 -56900582 - L2 LINE L2 -322 2991 2804 818 222 11 22 chr20 9767425 9767610 -56900395 + MER5A DNA MER1_type 1 183 -6 383 243 139 40 chr20 9767605 9767778 -56900227 - L2 LINE L2 -493 2821 2632 * 661 221 0 21 chr20 9768266 9768406 -56899599 - MER58B DNA MER1_type -3 338 202 389 153 14 0 chr20 9769026 9769098 -56898907 - LTR8A LTR ERV1 0 727 655 1286 117 0 0 chr20 9769098 9769269 -56898736 + AluSq SINE Alu 1 171 -142 1038 162 11 37 chr20 9769270 9769461 -56898544 + AluJb SINE Alu 122 307 -5 2105 176 143 34 chr20 9769461 9770056 -56897949 - LTR8A LTR ERV1 -67 660 1 2609 172 54 16 chr20 9770666 9771167 -56896838 - MLT2B1 LTR ERVL 0 520 1 3846 129 6 8 chr20 9771259 9771886 -56896119 - MER41B LTR ERV1 -7 628 3 343 282 25 22 chr20 9771891 9772026 -56895979 - MIR SINE MIR -62 146 62 1049 138 39 17 chr20 9772053 9772234 -56895771 + MER5A DNA MER1_type 1 185 -4 215 302 132 44 chr20 9772396 9772578 -56895427 - MIR SINE MIR -13 249 52 2093 118 0 29 chr20 9772900 9773215 -56894790 - AluSc SINE Alu -3 306 1 2011 140 3 37 chr20 9773219 9773540 -56894465 - AluJo SINE Alu -2 310 1 422 294 49 54 chr20 9774093 9774277 -56893728 + MIR SINE MIR 10 192 -70 * 732 251 215 14 chr20 9774271 9774727 -56893278 + L2 LINE L2 2684 3251 -62 443 280 70 21 chr20 9775039 9775325 -56892680 + LTR16B LTR ERVL 131 430 -34 1070 122 0 43 chr20 9775325 9775489 -56892516 + FRAM SINE Alu 20 176 0 1517 94 0 0 chr20 9775513 9775705 -56892300 + AluSc SINE Alu 87 278 -31 210 37 0 0 chr20 9775709 9775736 -56892269 + (CAA)n Simple_repeat Simple_repeat 1 27 0 1553 155 100 35 chr20 9777117 9777458 -56890547 - MLT1A1 LTR MaLR 0 365 3 32 0 0 0 chr20 9777482 9777514 -56890491 + AT_rich Low_complexity Low_complexity 1 32 0 216 339 57 16 chr20 9778247 9778371 -56889634 + MIR SINE MIR 59 187 -75 1505 139 15 133 chr20 9778438 9778768 -56889237 + AluJo SINE Alu 1 291 -11 2299 101 0 0 chr20 9778776 9779083 -56888922 + AluY SINE Alu 1 307 -4 536 197 14 84 chr20 9779981 9780025 -56887980 + MIR SINE MIR 110 156 -106 2140 202 38 64 chr20 9780025 9780653 -56887352 - LTR9 LTR ERV1 0 612 1 536 197 14 84 chr20 9780653 9780750 -56887255 + MIR SINE MIR 156 241 -21 257 335 92 38 chr20 9781800 9781913 -56886092 + MIR SINE MIR 24 152 -110 696 204 105 11 chr20 9781913 9782104 -56885901 - MER3 DNA MER1_type 0 209 1 257 335 92 38 chr20 9782104 9782175 -56885830 + MIR SINE MIR 152 218 -44 360 305 100 46 chr20 9782203 9782442 -56885563 - MIR SINE MIR -1 261 10 261 329 35 0 chr20 9784207 9784292 -56883713 - MER91A DNA MER1_type 0 196 109 25 65 0 0 chr20 9784422 9784468 -56883537 + AT_rich Low_complexity Low_complexity 1 46 0 284 277 10 50 chr20 9784490 9784591 -56883414 - L2 LINE L2 -50 3263 3167 1593 297 190 17 chr20 9784592 9785728 -56882277 - L2 LINE L2 -257 3056 1725 528 329 156 30 chr20 9785738 9786237 -56881768 - L2 LINE L2 -2032 1282 721 248 257 0 0 chr20 9786744 9786814 -56881191 - MER116 DNA Mariner -2 78 9 277 359 78 30 chr20 9786887 9787054 -56880951 - MIR SINE MIR -43 219 45 843 242 0 0 chr20 9787734 9787912 -56880093 - MER5A DNA MER1_type 0 189 12 186 118 0 0 chr20 9788013 9788047 -56879958 + (A)n Simple_repeat Simple_repeat 1 34 0 313 342 140 37 chr20 9788587 9788830 -56879175 - L2 LINE L2 0 3272 3005 210 118 0 0 chr20 9789060 9789094 -56878911 + (TA)n Simple_repeat Simple_repeat 2 35 0 1545 169 29 4 chr20 9789684 9789956 -56878049 + AluJb SINE Alu 1 279 -33 622 237 160 0 chr20 9790552 9790708 -56877297 - MER5A DNA MER1_type 0 189 9 1383 175 64 3 chr20 9790724 9791021 -56876984 - MER33 DNA MER1_type 0 324 10 395 234 171 19 chr20 9791580 9791738 -56876267 + MER5A DNA MER1_type 8 189 0 852 241 26 22 chr20 9791963 9792195 -56875810 + MIR SINE MIR 28 260 -2 506 231 148 24 chr20 9792210 9792379 -56875626 - MIR3 SINE MIR -15 193 4 2397 130 55 2 chr20 9792533 9792948 -56875057 - Tigger2 DNA MER2_type -2 2716 2280 362 132 0 0 chr20 9792951 9793004 -56875001 - Tigger2 DNA MER2_type -2653 65 13 23 0 0 0 chr20 9793246 9793269 -56874736 + AT_rich Low_complexity Low_complexity 1 23 0 970 279 124 35 chr20 9794995 9795796 -56872209 + L2 LINE L2 2345 3301 -12 1169 142 6 0 chr20 9796309 9796485 -56871520 + AluSq SINE Alu 121 297 -16 181 200 0 60 chr20 9797356 9797406 -56870599 + MER5A DNA MER1_type 22 68 -121 567 196 181 0 chr20 9797446 9797584 -56870421 + MER5A DNA MER1_type 27 189 0 386 271 107 40 chr20 9798456 9798681 -56869324 - Charlie8 DNA MER1_type -2141 276 37 240 330 21 32 chr20 9798859 9798953 -56869052 + MIR3 SINE MIR 87 179 -29 2305 106 7 0 chr20 9798977 9799280 -56868725 + AluSc SINE Alu 1 305 -4 216 0 0 0 chr20 9799914 9799938 -56868067 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 213 121 0 0 chr20 9800335 9800368 -56867637 + (A)n Simple_repeat Simple_repeat 1 33 0 1041 168 10 5 chr20 9800405 9800607 -56867398 - L1MB5 LINE L1 0 6174 5972 727 271 9 19 chr20 9801324 9801538 -56866467 + MER58C DNA MER1_type 3 214 -1 834 214 83 61 chr20 9801585 9801814 -56866191 - MIR SINE MIR -27 235 2 2077 139 3 3 chr20 9801829 9802139 -56865866 - AluSx SINE Alu -2 310 1 684 82 0 0 chr20 9802474 9802572 -56865433 - L1PA4 LINE L1 -7 6148 6051 21 36 0 0 chr20 9805613 9805641 -56862364 + AT_rich Low_complexity Low_complexity 1 28 0 759 218 18 6 chr20 9805739 9805904 -56862101 - MER5A DNA MER1_type -22 167 1 416 242 194 8 chr20 9806049 9806173 -56861832 + MER5A DNA MER1_type 41 187 -2 374 222 67 89 chr20 9806208 9806388 -56861617 + MER5B DNA MER1_type 1 176 -2 30 0 0 0 chr20 9806544 9806574 -56861431 + AT_rich Low_complexity Low_complexity 1 30 0 7421 37 15 0 chr20 9806580 9807602 -56860403 - L1PA3 LINE L1 -5 6150 5127 1802 179 3 6 chr20 9808115 9808427 -56859578 + AluJb SINE Alu 1 311 -1 1728 172 36 9 chr20 9808786 9809117 -56858888 + MLT1A1 LTR MaLR 1 340 -25 620 243 171 0 chr20 9809209 9809361 -56858644 - MER5A DNA MER1_type -3 186 9 725 240 76 0 chr20 9809377 9809548 -56858457 - MER5A DNA MER1_type 0 189 6 1970 139 3 16 chr20 9809894 9810203 -56857802 + AluSx SINE Alu 1 305 -7 193 236 181 0 chr20 9811399 9811471 -56856534 + MIR SINE MIR 65 149 -59 2717 141 82 68 chr20 9812255 9812951 -56855054 + L1MB3 LINE L1 5475 6180 -3 697 201 168 6 chr20 9813071 9813250 -56854755 + MER3 DNA MER1_type 1 208 -1 184 143 95 0 chr20 9815251 9815293 -56852712 + MIR SINE MIR 94 139 -123 607 256 118 44 chr20 9815610 9815931 -56852074 + LTR16A1 LTR ERVL 22 366 -91 935 168 5 16 chr20 9816407 9816598 -56851407 - MER53 DNA DNA 0 189 1 2206 90 6 32 chr20 9817389 9817700 -56850305 + AluY SINE Alu 1 303 -8 187 314 0 0 chr20 9820162 9820213 -56847792 - L2 LINE L2 -5 3267 3217 2366 101 0 3 chr20 9821907 9822214 -56845791 + AluSx SINE Alu 1 306 -6 292 169 42 0 chr20 9822717 9822788 -56845217 + CT-rich Low_complexity Low_complexity 3 76 0 22 35 0 0 chr20 9823050 9823079 -56844926 + AT_rich Low_complexity Low_complexity 1 29 0 198 0 0 0 chr20 9824139 9824161 -56843844 + (TTG)n Simple_repeat Simple_repeat 2 23 0 202 244 0 51 chr20 9825681 9825759 -56842246 + T-rich Low_complexity Low_complexity 5 78 0 356 331 49 20 chr20 9826949 9827194 -56840811 + L1 LINE L1 4143 4394 -1752 633 201 157 0 chr20 9827448 9827607 -56840398 + MER5A DNA MER1_type 4 187 -2 23 0 0 0 chr20 9828355 9828378 -56839627 + AT_rich Low_complexity Low_complexity 1 23 0 772 204 22 50 chr20 9829161 9829342 -56838663 - MER5A DNA MER1_type -1 188 13 27 29 0 0 chr20 9829531 9829565 -56838440 + AT_rich Low_complexity Low_complexity 1 34 0 180 77 0 0 chr20 9830478 9830504 -56837501 + (CA)n Simple_repeat Simple_repeat 2 27 0 213 246 41 0 chr20 9832553 9832629 -56835376 + MIR SINE MIR 68 151 -57 256 300 100 8 chr20 9832665 9832785 -56835220 - L2 LINE L2 -1 3312 3182 526 297 6 0 chr20 9832962 9833127 -56834878 + L1ME LINE L1 5493 5658 -504 1622 298 147 17 chr20 9833130 9834162 -56833843 + L2 LINE L2 2096 3270 -43 266 272 18 18 chr20 9834223 9834337 -56833668 + L1ME LINE L1 5728 5841 -329 192 279 82 68 chr20 9835077 9835224 -56832781 - MIR3 SINE MIR -35 173 25 295 100 0 0 chr20 9836010 9836050 -56831955 - tRNA-Ile-ATT tRNA tRNA -37 40 1 8429 93 15 97 chr20 9836077 9837570 -56830435 - SVA Other Other 0 1386 17 23 68 0 0 chr20 9837740 9837784 -56830221 + AT_rich Low_complexity Low_complexity 1 44 0 188 83 0 28 chr20 9837928 9837964 -56830041 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 1172 47 0 0 chr20 9837964 9838114 -56829891 - L1PA4 LINE L1 -24 6131 5982 1722 105 8 27 chr20 9838174 9838432 -56829573 - AluSq SINE Alu -14 299 47 2163 120 3 0 chr20 9839238 9839530 -56828475 + AluSp SINE Alu 1 293 -20 181 344 0 16 chr20 9839654 9839718 -56828287 - MER5B DNA MER1_type 0 178 116 1964 131 25 0 chr20 9839719 9840001 -56828004 + AluSx SINE Alu 2 290 -22 503 298 36 0 chr20 9842172 9842340 -56825665 - MER5B DNA MER1_type 0 178 5 635 258 77 13 chr20 9842907 9843320 -56824685 + LTR16C LTR ERVL 4 489 -2 2482 76 3 80 chr20 9843443 9843854 -56824151 - MER51B LTR ERV1 -2 375 7 268 286 13 0 chr20 9844163 9844240 -56823765 + (TGGA)n Simple_repeat Simple_repeat 4 81 0 202 260 14 27 chr20 9845649 9845722 -56822283 + (CATATA)n Simple_repeat Simple_repeat 6 77 0 316 326 44 34 chr20 9845951 9846228 -56821777 - L1MC/D LINE L1 -464 5657 5407 1829 132 3 43 chr20 9846963 9847266 -56820739 + AluJo SINE Alu 1 291 -21 4851 137 56 10 chr20 9847938 9848809 -56819196 - Tigger1 DNA MER2_type 0 2418 1508 883 237 128 60 chr20 9849071 9849619 -56818386 - MLT1G1 LTR MaLR -7 588 4 632 53 0 0 chr20 9849971 9850072 -56817933 - AluY SINE Alu 0 309 209 403 326 23 8 chr20 9850072 9850204 -56817801 - MIR SINE MIR -96 166 33 224 71 48 0 chr20 9851072 9851114 -56816891 + (TTAAA)n Simple_repeat Simple_repeat 2 45 0 339 281 26 26 chr20 9851218 9851332 -56816673 + MIR3 SINE MIR 71 184 -24 180 0 0 0 chr20 9851374 9851394 -56816611 + (TTG)n Simple_repeat Simple_repeat 2 21 0 355 269 58 6 chr20 9851545 9851701 -56816304 - MER104 DNA Tc2 -12 168 5 213 310 14 111 chr20 9853308 9853524 -56814481 - L2 LINE L2 -4 3309 3115 1081 287 111 22 chr20 9853643 9854193 -56813812 - L2 LINE L2 -414 2900 2302 782 238 17 17 chr20 9854220 9854392 -56813613 + MIR SINE MIR 65 236 -26 237 279 0 0 chr20 9854420 9854481 -56813524 + (CAT)n Simple_repeat Simple_repeat 2 62 0 292 251 235 25 chr20 9854490 9854733 -56813272 - L2 LINE L2 -1047 2267 1974 2012 139 47 28 chr20 9854743 9855130 -56812875 - MER57A LTR ERV1 -9 394 1 991 280 143 16 chr20 9855130 9855619 -56812386 - L2 LINE L2 -1345 1969 1419 1360 111 0 0 chr20 9855727 9855907 -56812098 + AluSg/x SINE Alu 124 303 -9 785 187 239 28 chr20 9855938 9856257 -56811748 - MLT1A1 LTR MaLR 0 365 1 22 0 0 0 chr20 9856334 9856356 -56811649 + AT_rich Low_complexity Low_complexity 1 22 0 2272 76 3 26 chr20 9857773 9858075 -56809930 - AluY SINE Alu -15 296 2 765 207 40 29 chr20 9858395 9858569 -56809436 + MER5A DNA MER1_type 13 188 -1 186 211 211 0 chr20 9858580 9858637 -56809368 + MIR SINE MIR 114 182 -80 1840 119 83 4 chr20 9858650 9858927 -56809078 - AluSg SINE Alu -11 299 1 239 318 34 59 chr20 9863601 9863766 -56804239 + MIR SINE MIR 18 178 -56 1065 248 151 17 chr20 9863812 9864223 -56803782 + MER31B LTR ERV1 1 466 0 258 136 0 0 chr20 9864612 9864656 -56803349 + Alu SINE Alu 1 44 -258 2458 63 0 10 chr20 9864656 9864959 -56803046 + AluY SINE Alu 1 300 -11 1596 196 31 0 chr20 9865047 9865333 -56802672 - AluJb SINE Alu -17 295 1 1126 133 86 26 chr20 9866190 9866423 -56801582 - Tigger7 DNA MER2_type 0 2587 2341 23 78 0 0 chr20 9866508 9866559 -56801446 + AT_rich Low_complexity Low_complexity 1 51 0 375 218 13 0 chr20 9866567 9866645 -56801360 - Tigger7 DNA MER2_type -2408 79 1 315 253 0 0 chr20 9866670 9866753 -56801252 + HsTC2 DNA Tc2 1815 1897 -1 721 226 101 0 chr20 9866979 9867138 -56800867 - MER45A DNA AcHobo -3 175 1 24 0 0 0 chr20 9868485 9868509 -56799496 + AT_rich Low_complexity Low_complexity 1 24 0 4055 205 59 10 chr20 9868602 9869634 -56798371 - L1MB7 LINE L1 -119 6065 4897 186 43 0 0 chr20 9869634 9869657 -56798348 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 4055 205 59 10 chr20 9869657 9870465 -56797540 - L1MB7 LINE L1 -1287 4897 4130 1014 189 69 36 chr20 9870465 9870825 -56797180 + Charlie4a DNA MER1_type 56 427 -81 747 253 34 51 chr20 9871374 9871613 -56796392 + L1ME1 LINE L1 5871 6106 -60 2040 125 30 0 chr20 9871613 9871910 -56796095 - AluSx SINE Alu -6 306 1 747 253 34 51 chr20 9871910 9871966 -56796039 + L1ME1 LINE L1 6106 6161 -5 240 293 71 20 chr20 9872194 9872293 -56795712 - MIR3 SINE MIR -1 207 104 261 271 35 24 chr20 9875395 9875480 -56792525 + MIR3 SINE MIR 119 204 -4 516 237 37 56 chr20 9875860 9876075 -56791930 + MIR SINE MIR 23 233 -29 2199 129 6 0 chr20 9877647 9877958 -56790047 - AluSq SINE Alu 0 313 1 23 0 0 0 chr20 9877965 9877988 -56790017 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr20 9878047 9878069 -56789936 + AT_rich Low_complexity Low_complexity 1 22 0 2007 144 0 0 chr20 9878224 9878529 -56789476 + AluSx SINE Alu 1 305 -7 325 259 153 0 chr20 9879661 9879792 -56788213 + MER103 DNA DNA 7 157 -9 1451 104 8 58 chr20 9881237 9881343 -56786662 + MER30 DNA MER1_type 2 112 -118 207 0 0 0 chr20 9881343 9881366 -56786639 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1451 104 8 58 chr20 9881366 9881499 -56786506 + MER30 DNA MER1_type 112 229 -1 1371 221 94 21 chr20 9882292 9882718 -56785287 - MLT1C LTR MaLR -5 462 6 2076 144 13 0 chr20 9882744 9882916 -56785089 - AluSx SINE Alu -9 303 124 408 20 0 0 chr20 9882916 9882965 -56785040 + (TG)n Simple_repeat Simple_repeat 2 50 0 2076 144 13 0 chr20 9882965 9883091 -56784914 - AluSx SINE Alu -188 124 1 664 284 75 53 chr20 9884562 9885030 -56782975 + L1MC5 LINE L1 7477 7954 -7 639 244 100 25 chr20 9885135 9885495 -56782510 + L1ME4a LINE L1 5511 5839 -282 2186 129 0 0 chr20 9885647 9885957 -56782048 - AluSx SINE Alu -2 310 1 21 0 0 0 chr20 9886244 9886265 -56781740 + AT_rich Low_complexity Low_complexity 1 21 0 383 295 87 15 chr20 9886390 9886584 -56781421 - MIR SINE MIR -43 219 17 1545 144 107 3 chr20 9887226 9887552 -56780453 + MER46B DNA MER2_type 2 236 0 1710 196 0 19 chr20 9887623 9887935 -56780070 - AluJo SINE Alu -6 306 1 2373 100 0 0 chr20 9889366 9889677 -56778328 + AluY SINE Alu 1 311 0 518 224 99 6 chr20 9890362 9890523 -56777482 - MLT1H LTR MaLR 0 549 374 440 222 9 13 chr20 9890652 9890765 -56777240 - MLT1H LTR MaLR -379 170 15 556 286 163 14 chr20 9891127 9891410 -56776595 - MLT1H LTR MaLR 0 549 225 1416 177 91 84 chr20 9891419 9891825 -56776180 - MER47B DNA MER2_type 0 418 10 937 208 5 10 chr20 9891833 9892035 -56775970 - MLT1H LTR MaLR -347 202 2 186 348 45 34 chr20 9892167 9892345 -56775660 - L2 LINE L2 -2410 904 725 980 252 53 13 chr20 9892704 9893022 -56774983 - LTR16C LTR ERVL 0 491 161 668 195 5 88 chr20 9893392 9893607 -56774398 - MER3 DNA MER1_type 0 209 13 248 271 29 14 chr20 9893877 9893947 -56774058 - MIR3 SINE MIR -27 181 111 1369 232 74 25 chr20 9894643 9895074 -56772931 + LTR16A1 LTR ERVL 3 454 -3 2179 126 3 0 chr20 9895764 9896058 -56771947 + AluSg SINE Alu 1 295 -15 22 0 0 0 chr20 9896573 9896595 -56771410 + AT_rich Low_complexity Low_complexity 1 22 0 492 328 88 17 chr20 9897332 9897570 -56770435 - MIR SINE MIR 0 262 8 2181 119 0 7 chr20 9897878 9898173 -56769832 + AluSq SINE Alu 1 293 -20 192 40 0 0 chr20 9898180 9898205 -56769800 + (CAA)n Simple_repeat Simple_repeat 2 26 0 1718 257 94 2 chr20 9898453 9898940 -56769065 - MLT1H LTR MaLR 0 549 18 305 341 0 12 chr20 9899000 9899085 -56768920 - MIR SINE MIR -171 91 8 1290 141 35 22 chr20 9899788 9900015 -56767990 - MER30 DNA MER1_type 0 230 1 346 277 74 83 chr20 9900629 9900954 -56767051 - MER102b DNA MER1_type -11 330 9 235 235 259 0 chr20 9901550 9901631 -56766374 - MIR3 SINE MIR -25 183 82 2084 127 40 0 chr20 9901930 9902230 -56765775 - AluSx SINE Alu 0 312 1 297 385 0 22 chr20 9902234 9902369 -56765636 - MIR3 SINE MIR -63 145 14 * 340 285 108 23 chr20 9902361 9902491 -56765514 - L2 LINE L2 -1 3312 3172 300 194 117 29 chr20 9903053 9903156 -56764849 - MIR SINE MIR -61 201 90 489 291 162 32 chr20 9904148 9904488 -56763517 + L3 LINE CR1 1144 1527 -50 2213 229 52 13 chr20 9905074 9905689 -56762316 - L1MC4a LINE L1 0 7808 7170 21 36 0 0 chr20 9906704 9906732 -56761273 + AT_rich Low_complexity Low_complexity 1 28 0 1903 149 4 4 chr20 9907142 9907417 -56760588 - AluSx SINE Alu -37 275 1 336 292 91 19 chr20 9909705 9909859 -56758146 - MLT1H LTR MaLR -1 548 384 716 236 81 8 chr20 9909916 9910162 -56757843 - MLT1H LTR MaLR -251 298 35 2323 115 0 0 chr20 9910343 9910655 -56757350 + AluSx SINE Alu 1 312 0 647 142 108 42 chr20 9911273 9911393 -56756612 + FLAM_C SINE Alu 1 128 -15 36369 83 8 9 chr20 9912571 9918737 -56749268 + L1PA6 LINE L1 11 6169 0 692 179 74 0 chr20 9919662 9919824 -56748181 - L1MB3 LINE L1 -19 6164 5991 24 32 0 0 chr20 9920226 9920257 -56747748 + AT_rich Low_complexity Low_complexity 1 31 0 2224 119 10 0 chr20 9920259 9920562 -56747443 - AluSx SINE Alu -6 306 1 566 258 150 0 chr20 9920763 9921003 -56747002 - LTR16A1 LTR ERVL -4 453 178 2289 114 0 7 chr20 9921328 9921635 -56746370 + AluSx SINE Alu 1 305 -7 363 205 29 10 chr20 9921978 9922088 -56745917 - L1MA4A LINE L1 -2 6280 6044 249 91 0 23 chr20 9922077 9922121 -56745884 - L1MA4A LINE L1 -181 6122 6080 * 719 267 87 41 chr20 9922339 9923105 -56744900 + L1ME3 LINE L1 2890 5572 -590 685 227 43 6 chr20 9923495 9923658 -56744347 + MER5A DNA MER1_type 20 188 -1 180 0 0 0 chr20 9924536 9924556 -56743449 + (T)n Simple_repeat Simple_repeat 1 20 0 2263 78 7 7 chr20 9925217 9925511 -56742494 + AluSc SINE Alu 1 294 -15 270 0 0 0 chr20 9925957 9925987 -56742018 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 643 239 15 0 chr20 9928540 9928670 -56739335 + MER94 DNA DNA 1 132 -2 654 237 102 0 chr20 9929933 9930095 -56737910 - MER5A DNA MER1_type -5 184 4 245 232 18 0 chr20 9931973 9932029 -56735976 + MIR3 SINE MIR 111 167 -41 25 0 0 0 chr20 9932530 9932555 -56735450 + AT_rich Low_complexity Low_complexity 1 25 0 778 217 5 33 chr20 9933318 9933502 -56734503 - MER104 DNA MER2_type 0 180 2 1532 211 24 27 chr20 9935824 9936156 -56731849 - MER87 LTR ERV1 0 541 211 2305 114 7 0 chr20 9936323 9936630 -56731375 - AluSx SINE Alu -3 309 1 1495 113 5 0 chr20 9936739 9936952 -56731053 + Tigger4(Zombi) DNA MER2_type 2518 2731 0 403 180 120 114 chr20 9937096 9937263 -56730742 + MLT1H LTR MaLR 382 549 0 335 125 0 16 chr20 9937512 9937576 -56730429 + (TCC)n Simple_repeat Simple_repeat 3 65 0 488 236 78 59 chr20 9938034 9938109 -56729896 + L1ME3 LINE L1 5578 5650 -512 548 240 38 82 chr20 9938109 9938292 -56729713 + FAM SINE Alu 1 175 0 488 236 78 59 chr20 9938292 9938530 -56729475 + L1ME3 LINE L1 5650 5988 -174 1520 192 52 50 chr20 9938642 9939063 -56728942 + Charlie1 DNA MER1_type 2340 2761 0 379 202 34 76 chr20 9939064 9939183 -56728822 + L1ME3 LINE L1 6046 6159 -3 488 332 57 22 chr20 9939807 9940036 -56727969 + MIR SINE MIR 8 244 -18 2945 172 26 6 chr20 9940338 9941199 -56726806 - L1M4 LINE L1 -400 5784 4906 321 274 41 11 chr20 9941241 9941352 -56726653 - L1M4 LINE L1 -1235 4911 4800 350 286 30 8 chr20 9941369 9941502 -56726503 + L2 LINE L2 1900 2035 -1279 2145 193 57 102 chr20 9941762 9942441 -56725564 - MLT1E1 LTR MaLR 0 654 6 372 94 0 0 chr20 9942446 9942499 -56725506 + (CA)n Simple_repeat Simple_repeat 1 53 0 1335 122 0 39 chr20 9942930 9943158 -56724847 + AluSg/x SINE Alu 86 305 0 1443 258 21 6 chr20 9943419 9943748 -56724257 + MER58B DNA MER1_type 4 337 -4 1206 253 68 50 chr20 9944169 9944651 -56723354 - LTR16C LTR ERVL 0 491 1 963 317 160 21 chr20 9945513 9946033 -56721972 + L2 LINE L2 2229 2820 -494 856 254 120 44 chr20 9946035 9946573 -56721432 - MLT1H1 LTR MaLR 0 555 1 706 261 122 46 chr20 9946662 9947121 -56720884 + MLT1J LTR MaLR 13 506 -5 1117 269 151 15 chr20 9947134 9947598 -56720407 - L2 LINE L2 -355 2959 2433 735 135 117 0 chr20 9947598 9947709 -56720296 + FRAM SINE Alu 28 151 -25 295 299 95 14 chr20 9947750 9947897 -56720108 - MLT1J LTR MaLR -5 506 348 244 225 195 117 chr20 9947955 9948033 -56719972 - L2 LINE L2 -902 2412 2341 2433 172 25 15 chr20 9948033 9948441 -56719564 - MLT2D LTR ERVL 0 414 3 1280 208 56 31 chr20 9948442 9948730 -56719275 + AluJo SINE Alu 1 295 -17 244 225 195 117 chr20 9948730 9948880 -56719125 - L2 LINE L2 -972 2342 2164 1950 209 64 56 chr20 9948888 9949372 -56718633 + LTR42 LTR ERVL 8 495 0 548 269 105 59 chr20 9949372 9949430 -56718575 - L2 LINE L2 -1146 2168 2114 1908 148 3 35 chr20 9949430 9949748 -56718257 + AluJo SINE Alu 1 308 -4 548 269 105 59 chr20 9949748 9949950 -56718055 - L2 LINE L2 -1200 2114 1891 1305 201 81 44 chr20 9949950 9950333 -56717672 - MLT2C1 LTR ERVL 0 397 1 548 269 105 59 chr20 9950333 9950357 -56717648 - L2 LINE L2 -1423 1891 1870 1487 279 104 58 chr20 9950363 9951220 -56716785 - L2 LINE L2 -2392 922 27 1037 219 11 0 chr20 9951672 9951859 -56716146 + MER5A DNA MER1_type 1 189 0 543 218 16 16 chr20 9952304 9952428 -56715577 + MER104 DNA Tc2 53 176 -4 514 276 44 61 chr20 9952439 9952667 -56715338 - L2 LINE L2 -169 3144 2921 190 278 14 42 chr20 9952656 9952728 -56715277 + L2 LINE L2 3167 3236 -36 * 293 326 126 0 chr20 9952895 9952990 -56715015 - L2 LINE L2 -29 3243 3137 2102 119 14 3 chr20 9953454 9953748 -56714257 - AluSg SINE Alu -13 297 1 325 259 129 62 chr20 9953792 9953985 -56714020 - MLT1K LTR MaLR -106 482 277 1130 191 179 52 chr20 9954323 9954647 -56713358 + MLT1A1 LTR MaLR 1 365 0 1102 171 97 52 chr20 9954762 9954881 -56713124 + MER33 DNA MER1_type 1 113 -2472 5697 132 29 30 chr20 9954881 9955804 -56712201 + MER49 LTR ERV1 1 922 -1 1102 171 97 52 chr20 9955804 9955994 -56712011 + MER33 DNA MER1_type 113 324 0 504 221 78 39 chr20 9956042 9956196 -56711809 + MER5A DNA MER1_type 4 163 -26 405 253 0 0 chr20 9956511 9956598 -56711407 - MIR SINE MIR -77 185 99 346 240 78 39 chr20 9956790 9956919 -56711086 - MER5B DNA MER1_type -9 169 36 314 259 129 0 chr20 9957075 9957160 -56710845 - MER5A DNA MER1_type -83 106 11 2075 106 0 4 chr20 9960988 9961262 -56706743 + AluSg SINE Alu 2 274 -36 249 57 0 0 chr20 9961263 9961298 -56706707 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 198 0 0 0 chr20 9964187 9964209 -56703796 + (GA)n Simple_repeat Simple_repeat 1 22 0 307 313 14 61 chr20 9964810 9964957 -56703048 + MIR SINE MIR 73 212 -50 22 0 0 0 chr20 9967226 9967248 -56700757 + GC_rich Low_complexity Low_complexity 1 22 0 1536 178 0 68 chr20 9968720 9969041 -56698964 - AluJo SINE Alu -13 299 1 346 303 7 26 chr20 9969698 9969850 -56698155 + CT-rich Low_complexity Low_complexity 3 151 0 327 96 0 0 chr20 9971844 9971896 -56696109 + (TG)n Simple_repeat Simple_repeat 2 53 0 323 180 101 22 chr20 9972234 9972323 -56695682 - MER5A DNA MER1_type -77 112 17 2419 162 18 49 chr20 9972348 9972842 -56695163 - LTR55 LTR ERV -69 479 1 288 91 0 0 chr20 9973228 9973272 -56694733 + (CAAAA)n Simple_repeat Simple_repeat 3 46 0 206 228 35 0 chr20 9973289 9973346 -56694659 - MIR SINE MIR -115 147 89 460 277 88 0 chr20 9973891 9974028 -56693977 - LTR16C LTR ERVL -196 295 147 582 183 157 0 chr20 9974258 9974373 -56693632 - FLAM_A SINE Alu 0 133 1 1512 179 181 33 chr20 9975163 9975593 -56692412 + Charlie4a DNA MER1_type 5 498 -10 564 261 55 40 chr20 9975603 9975802 -56692203 - MER112 DNA MER1_type -58 202 1 204 67 0 0 chr20 9975877 9975907 -56692098 + (A)n Simple_repeat Simple_repeat 1 30 0 1143 245 46 23 chr20 9975907 9976213 -56691792 - MER46C DNA MER2_type -22 316 4 199 227 0 0 chr20 9976607 9976651 -56691354 - L2 LINE L2 -16 3256 3213 * 465 270 147 0 chr20 9976624 9976787 -56691218 - MIR SINE MIR -27 235 49 21 0 0 0 chr20 9977460 9977481 -56690524 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr20 9977538 9977564 -56690441 + AT_rich Low_complexity Low_complexity 1 26 0 471 212 68 27 chr20 9977921 9978067 -56689938 - MER113 DNA MER1_type? -73 448 297 204 175 25 0 chr20 9978095 9978135 -56689870 + (TA)n Simple_repeat Simple_repeat 1 41 0 229 65 0 0 chr20 9978135 9978181 -56689824 + LTR66 LTR ERVL 394 439 -171 229 65 0 0 chr20 9978145 9978191 -56689814 - LTR66 LTR ERVL -171 439 394 498 233 116 0 chr20 9978196 9978343 -56689662 - L1MA10 LINE L1 -7 6327 6005 319 267 0 0 chr20 9978341 9978416 -56689589 - L1ME3A LINE L1 -51 6119 6045 * 393 312 109 0 chr20 9978492 9978630 -56689375 + MIR SINE MIR 24 176 -86 500 136 34 11 chr20 9979154 9979242 -56688763 + L1ME3A LINE L1 6029 6118 -52 1953 187 57 26 chr20 9979248 9979272 -56688733 - L1ME3 LINE L1 -6 6156 6134 3679 139 39 7 chr20 9979272 9979911 -56688094 + L1MA4A LINE L1 5682 6298 -5 3127 141 43 6 chr20 9979340 9979579 -56688426 + L1MA4A LINE L1 5749 5978 -325 324 48 0 0 chr20 9979579 9979621 -56688384 + (TG)n Simple_repeat Simple_repeat 2 43 0 3127 141 43 6 chr20 9979621 9979914 -56688091 + L1MA4A LINE L1 5978 6301 -2 1953 187 57 26 chr20 9979911 9980540 -56687465 - L1ME3 LINE L1 -28 6134 5474 * 403 298 25 25 chr20 9984165 9984323 -56683682 + MER5A DNA MER1_type 8 165 -24 257 301 148 7 chr20 9984353 9984526 -56683479 + MIR SINE MIR 66 262 0 2538 53 0 3 chr20 9984625 9984929 -56683076 + AluY SINE Alu 1 303 -8 1401 174 166 13 chr20 9985073 9985453 -56682552 + Charlie4a DNA MER1_type 47 484 -24 383 250 19 48 chr20 9985545 9985649 -56682356 - L2 LINE L2 -12 3301 3201 239 240 0 0 chr20 9985661 9985711 -56682294 + (TG)n Simple_repeat Simple_repeat 2 51 0 1557 150 0 17 chr20 9985728 9985968 -56682037 + MER46A DNA MER2_type 1 236 0 661 276 37 28 chr20 9986425 9986639 -56681366 + LTR16C LTR ERVL 276 491 0 3809 83 6 4 chr20 9987859 9988331 -56679674 + L1PA7 LINE L1 5668 6143 -11 189 0 0 0 chr20 9988331 9988352 -56679653 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 207 139 0 0 chr20 9990350 9990386 -56677619 + (T)n Simple_repeat Simple_repeat 1 36 0 769 159 44 0 chr20 9991408 9991521 -56676484 - FLAM_A SINE Alu -14 119 2 1113 276 71 31 chr20 9991528 9991980 -56676025 - L1ME3 LINE L1 -35 6127 5658 2424 77 0 0 chr20 9992019 9992317 -56675688 - AluY SINE Alu -13 298 1 839 313 91 43 chr20 9992725 9992981 -56675024 + L2 LINE L2 2787 3029 -284 1873 174 52 33 chr20 9992981 9993349 -56674656 + THE1C LTR MaLR 1 375 0 839 313 91 43 chr20 9993349 9993581 -56674424 + L2 LINE L2 3029 3294 -19 460 269 84 18 chr20 9993599 9993766 -56674239 - MIR SINE MIR -70 192 15 244 317 230 23 chr20 9996795 9997186 -56670819 + L2 LINE L2 2017 2488 -826 222 286 29 43 chr20 9997223 9997293 -56670712 + L2 LINE L2 3241 3309 -4 226 301 30 69 chr20 9997422 9997625 -56670380 - L1MC4 LINE L1 -3 8039 7845 226 247 41 14 chr20 9997652 9997725 -56670280 - L1ME2 LINE L1 0 6164 6090 1483 229 92 25 chr20 9998224 9998657 -56669348 + MLT1C LTR MaLR 6 467 0 808 234 16 10 chr20 9998658 9998850 -56669155 - MIR SINE MIR -15 247 55 423 158 0 13 chr20 9999043 9999119 -56668886 + MER5A DNA MER1_type 30 104 -85 361 256 12 12 chr20 9999437 9999523 -56668482 + MER81 DNA DNA 29 114 0 821 18 0 81 chr20 9999650 9999761 -56668244 - L1PA2 LINE L1 0 6155 6054 2826 124 51 24 chr20 10000884 10001337 -56666668 + MER4C LTR ERV1 1 465 0 270 0 0 0 chr20 10002013 10002043 -56665962 + (TG)n Simple_repeat Simple_repeat 2 31 0 722 224 7 0 chr20 10003011 10003163 -56664842 + MER5A DNA MER1_type 32 184 -5 325 303 25 33 chr20 10003185 10003307 -56664698 - LTR16C LTR ERVL -367 124 4 511 227 9 0 chr20 10003348 10003458 -56664547 - Charlie8 DNA MER1_type -2232 185 75 1709 181 7 23 chr20 10003998 10004308 -56663697 - AluJo SINE Alu -7 305 1 509 249 138 27 chr20 10004308 10004523 -56663482 - L1MD2 LINE L1 -9 6350 6108 423 200 0 42 chr20 10004535 10004630 -56663375 - LTR16C LTR ERVL -127 364 274 447 48 145 0 chr20 10004630 10004692 -56663313 - MADE1 DNA Mariner -8 72 2 3051 174 82 35 chr20 10004693 10005372 -56662633 - L1MD2 LINE L1 -261 6098 5388 1292 245 160 17 chr20 10005401 10005901 -56662104 + MLT1G1 LTR MaLR 1 553 -2 693 288 88 63 chr20 10006127 10006492 -56661513 + L2 LINE L2 2938 3311 -2 1009 229 130 80 chr20 10006905 10007428 -56660577 + MLT1H LTR MaLR 1 549 0 263 224 47 56 chr20 10007570 10007677 -56660328 + L1ME4a LINE L1 6016 6121 0 759 285 93 40 chr20 10008055 10008525 -56659480 + LTR33 LTR ERVL 1 512 -9 342 70 0 0 chr20 10009289 10009396 -56658609 - Alu SINE Alu 0 347 241 2030 129 0 14 chr20 10009401 10009696 -56658309 - AluSx SINE Alu -21 291 1 232 329 0 37 chr20 10009791 10009873 -56658132 + MIR SINE MIR 78 156 -106 263 295 116 0 chr20 10010133 10010245 -56657760 - MIR SINE MIR -88 174 50 1831 127 4 4 chr20 10010797 10011064 -56656941 + AluSx SINE Alu 37 303 -9 343 280 48 97 chr20 10011595 10011655 -56656350 + MIR SINE MIR 53 114 -148 1990 149 0 7 chr20 10011655 10011943 -56656062 - AluJo SINE Alu -26 286 1 343 280 48 97 chr20 10011943 10012068 -56655937 + MIR SINE MIR 114 229 -33 383 174 19 11 chr20 10012160 10012255 -56655750 - MER5A DNA MER1_type -47 131 35 377 316 200 0 chr20 10013146 10013301 -56654704 + MER5A DNA MER1_type 4 189 0 352 318 85 79 chr20 10013301 10013630 -56654375 + L2 LINE L2 2933 3263 -9 685 284 132 19 chr20 10015620 10016131 -56651874 + L1ME4a LINE L1 5255 5828 -293 34 84 0 0 chr20 10016153 10016236 -56651769 + AT_rich Low_complexity Low_complexity 1 83 0 352 259 140 97 chr20 10016303 10016654 -56651351 + L1ME4a LINE L1 5754 6119 -2 523 255 176 14 chr20 10016782 10016998 -56651007 + MIR SINE MIR 1 251 -11 219 274 0 0 chr20 10018513 10018564 -56649441 + L2 LINE L2 3217 3267 -5 709 218 128 11 chr20 10018682 10018861 -56649144 - MER3 DNA MER1_type -8 201 2 1220 264 138 25 chr20 10018894 10019756 -56648249 - L2 LINE L2 0 3313 2370 1738 210 109 61 chr20 10019756 10019967 -56648038 + MLT1F LTR MaLR 1 201 -341 960 170 14 14 chr20 10019967 10020142 -56647863 + FRAM SINE Alu 1 175 0 1738 210 109 61 chr20 10020142 10020432 -56647573 + MLT1F LTR MaLR 201 529 -13 411 82 0 33 chr20 10020453 10020514 -56647491 + MLT1F LTR MaLR 484 542 0 1134 265 152 7 chr20 10020515 10020923 -56647082 - L2 LINE L2 -941 2373 1907 182 250 104 0 chr20 10021273 10021321 -56646684 + MIR SINE MIR 77 129 -133 * 369 273 110 16 chr20 10021288 10021494 -56646511 + MIR SINE MIR 38 261 -1 687 328 9 4 chr20 10022884 10023113 -56644892 - MIR SINE MIR 0 262 33 934 189 30 0 chr20 10026472 10026636 -56641369 - FRAM SINE Alu -8 168 1 257 269 343 0 chr20 10026638 10026746 -56641259 - MIR SINE MIR -98 164 20 495 293 87 34 chr20 10027123 10027331 -56640674 + MIR SINE MIR 25 243 -19 666 289 68 5 chr20 10027399 10027589 -56640416 - MIR SINE MIR -49 213 12 989 213 23 32 chr20 10027619 10027840 -56640165 + MER20 DNA MER1_type 1 219 0 271 235 295 18 chr20 10028029 10028195 -56639810 + MIR SINE MIR 50 261 -1 207 273 0 0 chr20 10028661 10028705 -56639300 + (CA)n Simple_repeat Simple_repeat 1 44 0 397 308 43 0 chr20 10029405 10029522 -56638483 + MIR SINE MIR 24 145 -63 25 0 0 0 chr20 10029605 10029630 -56638375 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr20 10032608 10032630 -56635375 + AT_rich Low_complexity Low_complexity 1 22 0 195 250 56 0 chr20 10033265 10033337 -56634668 - MER5C DNA MER1_type -14 310 235 6149 198 103 73 chr20 10033341 10033875 -56634130 - L1MC3 LINE L1 0 7785 7269 268 298 0 12 chr20 10033875 10033959 -56634046 - MLT1F1 LTR MaLR -436 131 49 6149 198 103 73 chr20 10033959 10035286 -56632719 - L1MC3 LINE L1 -516 7269 5782 2292 89 0 0 chr20 10035583 10035892 -56632113 - AluSg SINE Alu 0 309 1 274 289 163 22 chr20 10036550 10036685 -56631320 - MIR3 SINE MIR -36 172 19 375 378 25 10 chr20 10038196 10038400 -56629605 + MIR SINE MIR 53 259 -3 254 234 19 37 chr20 10038769 10038876 -56629129 + L1ME4a LINE L1 5940 6044 -77 449 245 185 0 chr20 10038881 10039032 -56628973 - MER5A DNA MER1_type 0 189 11 232 188 71 18 chr20 10039138 10039250 -56628755 + (TA)n Simple_repeat Simple_repeat 1 118 0 1531 136 4 0 chr20 10040943 10041171 -56626834 - AluSq SINE Alu -4 309 81 1357 167 101 40 chr20 10041275 10041551 -56626454 - AluJo SINE Alu -19 293 1 361 183 14 0 chr20 10041559 10041630 -56626375 + Charlie5 DNA MER1_type 2514 2585 -27 811 198 178 41 chr20 10041638 10041835 -56626170 + MER58A DNA MER1_type 1 224 0 455 282 84 23 chr20 10042345 10042574 -56625431 - MIR SINE MIR -2 260 19 683 220 5 52 chr20 10043422 10043613 -56624392 + L1PB4 LINE L1 5950 6131 -25 237 242 0 16 chr20 10043658 10043720 -56624285 + L1ME3 LINE L1 5952 6012 -150 234 146 24 0 chr20 10043720 10043761 -56624244 + MER3 DNA MER1_type 8 49 -160 327 321 0 0 chr20 10043761 10043867 -56624138 + L1ME3 LINE L1 6055 6160 -2 1710 170 3 17 chr20 10044299 10044599 -56623406 + AluJo SINE Alu 1 296 -16 180 0 0 0 chr20 10044724 10044744 -56623261 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 954 78 42 7 chr20 10044745 10044928 -56623077 - L1PA8 LINE L1 -13 6141 5931 358 44 0 0 chr20 10044929 10044974 -56623031 + L1P2 LINE L1 5557 5596 -558 351 65 0 0 chr20 10045088 10045134 -56622871 + (TC)n Simple_repeat Simple_repeat 1 46 0 463 221 188 13 chr20 10045287 10045436 -56622569 + MER5B DNA MER1_type 1 175 -3 674 224 160 0 chr20 10045462 10045618 -56622387 + MER5A DNA MER1_type 9 189 0 3165 142 55 6 chr20 10045627 10046121 -56621884 + LTR44 LTR ERV1 2 519 0 239 258 0 0 chr20 10046264 10046326 -56621679 + (TA)n Simple_repeat Simple_repeat 2 63 0 233 178 0 0 chr20 10046326 10046371 -56621634 + LTR66 LTR ERVL 394 438 -172 252 86 0 0 chr20 10046372 10046407 -56621598 + (CATATA)n Simple_repeat Simple_repeat 6 40 0 2656 49 0 0 chr20 10047636 10047942 -56620063 + AluY SINE Alu 1 306 -5 502 211 35 56 chr20 10047961 10048103 -56619902 + MER5B DNA MER1_type 36 174 -4 391 273 11 0 chr20 10048184 10048272 -56619733 - MER5A DNA MER1_type -92 97 9 371 309 111 19 chr20 10048362 10048524 -56619481 + MIR3 SINE MIR 19 195 -13 1346 243 84 6 chr20 10048811 10049237 -56618768 + MLT1H LTR MaLR 5 492 -57 6393 87 17 8 chr20 10049244 10050132 -56617873 - L1PA10 LINE L1 -12 6156 5260 4507 200 38 16 chr20 10050136 10051818 -56616187 - L1MB4 LINE L1 0 6180 4458 280 252 117 29 chr20 10052719 10052822 -56615183 - MIR SINE MIR -72 190 79 300 165 66 104 chr20 10053178 10053295 -56614710 + MLT1I LTR MaLR 316 409 0 2103 73 0 0 chr20 10053325 10053624 -56614381 + AluSc SINE Alu 34 332 0 430 229 243 7 chr20 10055039 10055183 -56612822 - MIR SINE MIR -73 189 12 250 299 0 10 chr20 10055220 10055317 -56612688 - MIR SINE MIR -36 226 131 2432 173 51 7 chr20 10055329 10055762 -56612243 + LTR32 LTR ERVL 20 471 0 300 297 17 42 chr20 10055774 10055892 -56612113 - MIR SINE MIR -133 129 15 667 312 149 14 chr20 10056227 10056576 -56611429 - LTR16C LTR ERVL 0 491 96 376 322 61 28 chr20 10056703 10056883 -56611122 + MIR SINE MIR 49 234 -28 2029 128 0 3 chr20 10056929 10057219 -56610786 + AluSx SINE Alu 2 290 -22 2882 146 12 5 chr20 10057306 10057731 -56610274 + MSTA LTR MaLR 1 428 0 671 242 127 53 chr20 10057799 10058121 -56609884 + L1ME3A LINE L1 5825 6170 0 1336 242 74 18 chr20 10058328 10058822 -56609183 + L1MC4 LINE L1 7180 7710 -98 1656 167 29 36 chr20 10058829 10059135 -56608870 + AluJb SINE Alu 4 307 -5 2073 169 34 20 chr20 10059170 10059526 -56608479 - MLT1A1 LTR MaLR -4 361 1 246 197 0 33 chr20 10059597 10059658 -56608347 + L1MC4 LINE L1 7984 8042 0 748 235 55 102 chr20 10062030 10062413 -56605592 + MLT1A1 LTR MaLR 1 365 0 1105 237 87 82 chr20 10062491 10063040 -56604965 + MER34B LTR ERV1 14 565 0 573 293 59 13 chr20 10063040 10063276 -56604729 + LTR16A1 LTR ERVL 199 445 -12 368 296 227 29 chr20 10063454 10063588 -56604417 + L2 LINE L2 2816 2922 -391 3014 126 5 5 chr20 10063588 10064016 -56603989 - MSTA LTR MaLR 0 428 1 368 296 227 29 chr20 10064016 10064256 -56603749 + L2 LINE L2 2922 3264 -49 792 223 18 18 chr20 10064269 10064435 -56603570 - MER58A DNA MER1_type -16 208 43 8476 156 51 23 chr20 10064444 10066285 -56601720 + L1MCa LINE L1 29 2011 -4415 2998 157 26 4 chr20 10066286 10066789 -56601216 + L1MC1 LINE L1 5820 6333 0 245 250 19 0 chr20 10066804 10066856 -56601149 - MER58A DNA MER1_type -171 53 1 786 253 155 43 chr20 10066917 10067408 -56600597 - MLT1H1 LTR MaLR 0 555 10 278 339 165 27 chr20 10067475 10067699 -56600306 - MIR SINE MIR -6 256 2 411 273 175 0 chr20 10067781 10067935 -56600070 - MER5A DNA MER1_type -1 188 8 214 211 70 42 chr20 10068619 10068690 -56599315 + MER5A DNA MER1_type 89 161 -28 2590 59 0 0 chr20 10068831 10069135 -56598870 - AluY SINE Alu -6 305 2 2350 91 0 26 chr20 10069685 10069994 -56598011 - AluSg SINE Alu -9 301 1 1963 148 30 0 chr20 10070201 10070504 -56597501 - AluJb SINE Alu 0 312 1 390 335 65 40 chr20 10070853 10071131 -56596874 - L3 LINE CR1 -115 1462 1178 190 315 70 49 chr20 10071159 10071302 -56596703 - L3 LINE CR1 -326 1251 1106 209 319 43 32 chr20 10071483 10071577 -56596428 + L2 LINE L2 3178 3272 -41 26 0 0 0 chr20 10072174 10072200 -56595805 + AT_rich Low_complexity Low_complexity 1 26 0 363 44 0 0 chr20 10072223 10072268 -56595737 + (GA)n Simple_repeat Simple_repeat 2 46 0 21 0 0 0 chr20 10072684 10072705 -56595300 + AT_rich Low_complexity Low_complexity 1 21 0 814 271 46 57 chr20 10072969 10073357 -56594648 + LTR16A1 LTR ERVL 72 455 -2 255 212 45 0 chr20 10073530 10073596 -56594409 + MER3 DNA MER1_type 35 103 -106 * 742 224 93 0 chr20 10073550 10073733 -56594272 - MER3 DNA MER1_type -8 201 2 2170 159 6 15 chr20 10073802 10074142 -56593863 + MER1B DNA MER1_type 1 337 0 586 273 107 27 chr20 10075025 10075325 -56592680 + L1ME LINE L1 5316 5639 -527 381 267 114 34 chr20 10075938 10076114 -56591891 + MIR SINE MIR 14 203 -59 239 234 0 11 chr20 10076331 10076425 -56591580 + (CCA)n Simple_repeat Simple_repeat 2 94 0 1091 172 11 6 chr20 10076850 10077024 -56590981 - FAM SINE Alu 0 175 1 186 174 0 0 chr20 10077522 10077568 -56590437 + A-rich Low_complexity Low_complexity 1 46 0 1475 213 164 65 chr20 10077601 10078127 -56589878 + MER119 DNA MER1_type 6 583 0 2364 106 0 0 chr20 10078896 10079208 -56588797 - AluSx SINE Alu 0 312 1 744 222 51 37 chr20 10079438 10079654 -56588351 - MIR SINE MIR -42 220 2 276 311 238 8 chr20 10079837 10079959 -56588046 + L2 LINE L2 3122 3271 -1 469 319 103 7 chr20 10080063 10080345 -56587660 + LTR16C LTR ERVL 89 397 -94 * 996 191 115 68 chr20 10080335 10080587 -56587418 + MLT1E LTR MaLR 330 593 0 325 160 0 0 chr20 10080589 10080639 -56587366 + MLT1E-int LTR MaLR 3 52 -1319 360 78 0 20 chr20 10080640 10080691 -56587314 - MLT1B LTR MaLR -1 389 340 * 788 194 49 93 chr20 10080684 10080759 -56587246 - MLT1B LTR MaLR -154 236 159 783 147 0 91 chr20 10080759 10080902 -56587103 - FLAM_C SINE Alu 0 133 4 788 194 49 93 chr20 10080902 10081073 -56586932 - MLT1B LTR MaLR -231 159 1 928 236 61 15 chr20 10081073 10081472 -56586533 + MLT1E-int LTR MaLR 48 580 -791 398 285 38 119 chr20 10081703 10082124 -56585881 + MLT1E-int LTR MaLR 692 1078 -293 744 178 43 103 chr20 10082176 10082429 -56585576 + MLT1E-int LTR MaLR 1107 1344 -27 1629 242 74 42 chr20 10082438 10083008 -56584997 + MLT1E LTR MaLR 4 591 -2 250 371 0 11 chr20 10083966 10084055 -56583950 + MIR3 SINE MIR 67 154 -54 293 351 54 43 chr20 10084147 10084332 -56583673 + MIR SINE MIR 12 198 -64 320 345 22 21 chr20 10086671 10086904 -56581101 + L2 LINE L2 2777 3006 -307 528 120 112 16 chr20 10088169 10088294 -56579711 - Charlie1 DNA MER1_type -1 2760 2624 1483 174 14 33 chr20 10088299 10088575 -56579430 - AluJo SINE Alu -28 284 14 310 225 83 31 chr20 10088576 10088781 -56579224 - Charlie1 DNA MER1_type -2517 244 1 22 0 0 0 chr20 10088835 10088857 -56579148 + AT_rich Low_complexity Low_complexity 1 22 0 774 237 68 0 chr20 10089257 10089434 -56578571 + MER5A DNA MER1_type 1 189 0 225 338 27 0 chr20 10089465 10089539 -56578466 + L3 LINE CR1 413 488 -1089 1137 178 0 0 chr20 10089805 10089985 -56578020 + MER5A DNA MER1_type 10 189 0 4077 38 0 10 chr20 10091342 10091847 -56576158 - L1PA4 LINE L1 -4 6151 5652 4041 114 14 163 chr20 10091847 10093437 -56574568 - pTR5 LTR ERV1 0 2606 1524 1758 19 0 0 chr20 10093437 10093645 -56574360 - L1P2 LINE L1 -500 5655 5448 204 269 0 0 chr20 10094867 10094960 -56573045 + (TA)n Simple_repeat Simple_repeat 1 93 0 312 277 73 59 chr20 10095829 10096049 -56571956 + MLT1I LTR MaLR 64 286 -123 248 195 85 49 chr20 10096126 10096208 -56571797 + MLT1J2 LTR MaLR 366 450 0 263 277 134 18 chr20 10096283 10096395 -56571610 + MIR SINE MIR 134 258 -4 224 302 81 0 chr20 10096642 10096728 -56571277 + MIR SINE MIR 47 139 -123 2434 63 0 7 chr20 10096868 10097168 -56570837 - AluY SINE Alu -13 298 1 431 228 138 42 chr20 10097169 10097358 -56570647 + L2 LINE L2 3097 3303 -10 465 287 175 30 chr20 10097864 10098303 -56569702 + MLT1H LTR MaLR 1 503 -46 293 255 20 31 chr20 10099348 10099374 -56568631 - MIR SINE MIR -70 192 167 2647 208 25 18 chr20 10099374 10099928 -56568077 - MER68 LTR ERV1 -2 560 3 293 255 20 31 chr20 10099928 10099999 -56568006 - MIR SINE MIR -95 167 96 232 271 141 0 chr20 10100498 10100583 -56567422 + MER103 DNA DNA 2 98 -68 608 293 41 62 chr20 10101054 10101296 -56566709 - MIR SINE MIR -5 257 21 313 258 187 7 chr20 10101594 10101749 -56566256 + LTR33 LTR ERVL 28 210 -311 765 265 46 14 chr20 10102372 10102591 -56565414 + MIR SINE MIR 15 240 -22 611 157 0 0 chr20 10102820 10102935 -56565070 + L1MB3 LINE L1 6061 6175 -8 323 309 100 36 chr20 10104622 10104923 -56563082 + L2 LINE L2 2217 2536 -778 1105 243 38 27 chr20 10104956 10105228 -56562777 - MLT1D LTR MaLR 0 505 248 1994 119 9 55 chr20 10105228 10105555 -56562450 - AluSx SINE Alu 0 312 1 1105 243 38 27 chr20 10105555 10105683 -56562322 - MLT1D LTR MaLR -257 248 123 548 341 40 23 chr20 10105734 10106036 -56561969 + L2 LINE L2 2559 2865 -449 352 323 45 23 chr20 10106293 10106513 -56561492 + L2 LINE L2 2575 2799 -515 263 355 61 43 chr20 10106756 10106998 -56561007 - L1MC/D LINE L1 -1947 5861 5610 2027 146 77 8 chr20 10106998 10107361 -56560644 - MLT1B LTR MaLR 0 390 3 263 355 61 43 chr20 10107361 10107445 -56560560 - L1MC/D LINE L1 -2198 5610 5529 276 111 22 0 chr20 10107509 10107554 -56560451 + L2 LINE L2 3264 3309 -4 780 240 112 16 chr20 10107860 10108093 -56559912 + MIR SINE MIR 15 262 0 229 244 11 44 chr20 10108212 10108302 -56559703 - L1MD1 LINE L1 -77 6165 6079 * 1875 212 33 11 chr20 10108301 10108753 -56559252 - L1MD2 LINE L1 -216 6143 5682 480 209 92 12 chr20 10108772 10108935 -56559070 + Charlie5 DNA MER1_type 2406 2581 -31 381 363 47 12 chr20 10109006 10109177 -56558828 - L2 LINE L2 -288 3025 2849 1434 259 133 8 chr20 10109443 10109917 -56558088 - MLT1H LTR MaLR -3 546 14 635 237 27 82 chr20 10109934 10110153 -56557852 + MER63A DNA MER1_type 1 207 -3 1162 321 22 34 chr20 10111653 10112158 -56555847 - L2 LINE L2 -2 3311 2813 895 175 16 58 chr20 10112169 10112358 -56555647 + MER5A DNA MER1_type 1 181 -8 2958 136 57 73 chr20 10112527 10113158 -56554847 + LTR29 LTR ERV1 2 622 0 21 36 0 0 chr20 10113371 10113399 -56554606 + AT_rich Low_complexity Low_complexity 1 28 0 647 289 135 15 chr20 10113716 10114047 -56553958 + MLT1J2 LTR MaLR 57 442 -8 378 328 21 6 chr20 10114065 10114223 -56553782 - MIR SINE MIR -62 146 25 505 267 59 16 chr20 10115154 10115341 -56552664 + L1ME3A LINE L1 5717 5911 -259 192 119 48 71 chr20 10115666 10115677 -56552328 + L3 LINE CR1 1534 1574 -3 205 97 0 0 chr20 10115677 10115708 -56552297 + MIR3 SINE MIR 171 201 -7 1611 155 59 41 chr20 10116212 10116502 -56551503 - AluJo SINE Alu -17 295 1 372 267 63 111 chr20 10116641 10116764 -56551241 + MLT1J LTR MaLR 43 170 -315 1607 186 0 35 chr20 10116764 10117076 -56550929 - AluJo SINE Alu -11 301 1 372 267 63 111 chr20 10117076 10117222 -56550783 + MLT1J LTR MaLR 170 338 -147 189 147 0 0 chr20 10117721 10117755 -56550250 + (GAAA)n Simple_repeat Simple_repeat 3 36 0 277 39 39 39 chr20 10117937 10117988 -56550017 + (CAAAA)n Simple_repeat Simple_repeat 4 54 0 1521 255 91 43 chr20 10118218 10118281 -56549724 + MLT1H1 LTR MaLR 1 60 -495 2216 111 3 0 chr20 10118281 10118569 -56549436 + AluSq SINE Alu 4 292 -21 1521 255 91 43 chr20 10118569 10119035 -56548970 + MLT1H1 LTR MaLR 60 555 0 200 31 62 0 chr20 10121022 10121054 -56546951 + T-rich Low_complexity Low_complexity 1 34 0 11415 30 0 1 chr20 10121057 10123176 -56544829 - L1PA4 LINE L1 -3 6152 4034 2744 96 0 0 chr20 10123632 10123996 -56544009 + THE1B LTR MaLR 1 364 0 319 281 31 10 chr20 10124173 10124269 -56543736 + L3 LINE CR1 1476 1573 -4 686 219 30 35 chr20 10124635 10124836 -56543169 + MER3 DNA MER1_type 9 208 -1 831 214 171 70 chr20 10125905 10126320 -56541685 - LTR16A1 LTR ERVL 0 457 1 283 214 14 57 chr20 10126674 10126744 -56541261 + L2 LINE L2 3247 3313 0 694 205 0 0 chr20 10126777 10126924 -56541081 - FLAM_A SINE Alu 0 147 1 2214 103 63 23 chr20 10127238 10127588 -56540417 - THE1B LTR MaLR 0 364 1 22 35 0 0 chr20 10127670 10127699 -56540306 + AT_rich Low_complexity Low_complexity 1 29 0 408 71 0 0 chr20 10128319 10128375 -56539630 + (TG)n Simple_repeat Simple_repeat 2 57 0 1051 207 163 3 chr20 10128960 10129333 -56538672 + Charlie4a DNA MER1_type 75 504 -4 2666 82 18 32 chr20 10129526 10129568 -56538437 - THE1C LTR MaLR 0 375 334 2373 89 0 0 chr20 10129568 10129870 -56538135 + AluY SINE Alu 1 302 -9 2666 82 18 32 chr20 10129870 10130207 -56537798 - THE1C LTR MaLR -41 334 1 216 359 58 81 chr20 10130207 10130246 -56537759 + L2 LINE L2 3040 3078 -194 2434 144 23 28 chr20 10130246 10130682 -56537323 + Tigger2a DNA MER2_type 1 434 0 216 359 58 81 chr20 10130682 10130865 -56537140 + L2 LINE L2 3078 3257 -15 207 299 68 77 chr20 10131396 10131513 -56536492 - L2 LINE L2 -1 3271 3156 1163 318 36 5 chr20 10131576 10132019 -56535986 - LTR16C LTR ERVL 0 491 35 856 273 87 39 chr20 10132121 10132937 -56535068 - L1MEc LINE L1 -3411 2804 1978 27 73 0 0 chr20 10132990 10133045 -56534960 + AT_rich Low_complexity Low_complexity 1 55 0 * 481 322 124 0 chr20 10133019 10133261 -56534744 - L1MEc LINE L1 -4579 1817 1546 2335 75 0 0 chr20 10133358 10133638 -56534367 + AluY SINE Alu 1 280 -31 183 42 0 0 chr20 10133641 10133665 -56534340 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 348 307 91 17 chr20 10134347 10134523 -56533482 - L3b LINE CR1 -99 1484 1296 212 119 0 24 chr20 10134764 10134806 -56533199 + (TTC)n Simple_repeat Simple_repeat 1 41 0 309 217 14 0 chr20 10134852 10134921 -56533084 + MLT1J1 LTR MaLR 26 95 -351 746 169 0 0 chr20 10135000 10135138 -56532867 - FRAM SINE Alu 0 165 28 266 328 39 8 chr20 10135138 10135266 -56532739 + MLT1J2 LTR MaLR 97 228 -222 417 256 66 29 chr20 10135302 10135439 -56532566 + MLT1J2 LTR MaLR 291 432 -18 385 226 0 65 chr20 10135475 10135568 -56532437 + MIR SINE MIR 12 98 -164 302 241 48 12 chr20 10135587 10135670 -56532335 + MLT1J2 LTR MaLR 339 424 -26 2147 171 55 25 chr20 10136540 10136979 -56531026 + MLT1C LTR MaLR 16 467 0 267 276 71 0 chr20 10136981 10137079 -56530926 + MIR SINE MIR 142 246 -16 245 290 70 30 chr20 10137261 10137361 -56530644 - L3b LINE CR1 -339 1244 1141 460 312 65 5 chr20 10137471 10137670 -56530335 + LTR33 LTR ERVL 10 220 -301 867 158 26 7 chr20 10137674 10137826 -56530179 - FRAM SINE Alu -9 167 13 300 337 86 0 chr20 10137899 10138074 -56529931 + LTR33 LTR ERVL 332 521 0 775 328 52 27 chr20 10138081 10138484 -56529521 - LTR16C LTR ERVL -6 485 73 257 292 146 27 chr20 10138981 10139166 -56528839 - L2 LINE L2 0 3313 3107 356 88 18 0 chr20 10139169 10139226 -56528779 + (TG)n Simple_repeat Simple_repeat 2 59 0 848 232 17 25 chr20 10141656 10141897 -56526108 - LTR16C LTR ERVL 0 491 253 2412 93 3 3 chr20 10142025 10142337 -56525668 - AluSq SINE Alu -1 312 1 22 0 0 0 chr20 10143783 10143805 -56524200 + AT_rich Low_complexity Low_complexity 1 22 0 180 230 180 70 chr20 10144058 10144158 -56523847 + MIR SINE MIR 31 141 -67 213 121 0 0 chr20 10144733 10144766 -56523239 + (TC)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr20 10145533 10145554 -56522451 + AT_rich Low_complexity Low_complexity 1 21 0 402 39 0 0 chr20 10145576 10145628 -56522377 + (TG)n Simple_repeat Simple_repeat 2 53 0 2389 246 87 18 chr20 10145705 10146740 -56521265 - L1ME3A LINE L1 -5 6165 5052 665 159 40 7 chr20 10147179 10147330 -56520675 - MER3 DNA MER1_type 0 2585 2430 399 193 12 0 chr20 10147331 10147414 -56520591 - MER3 DNA MER1_type -95 114 31 448 242 222 7 chr20 10147511 10147664 -56520341 + MER5A DNA MER1_type 1 186 -3 464 254 24 16 chr20 10148119 10148245 -56519760 + L2 LINE L2 3187 3313 0 407 344 56 0 chr20 10148457 10148582 -56519423 + L2 LINE L2 3182 3313 0 357 207 35 35 chr20 10149079 10149166 -56518839 - MER94 DNA DNA -29 105 19 180 0 0 0 chr20 10150836 10150856 -56517149 + (T)n Simple_repeat Simple_repeat 1 20 0 932 238 60 31 chr20 10151253 10151413 -56516592 - L1ME3 LINE L1 -181 5981 5827 1818 173 3 0 chr20 10151413 10151702 -56516303 + AluJb SINE Alu 2 291 -21 932 238 60 31 chr20 10151702 10151892 -56516113 - L1ME3 LINE L1 -335 5827 5595 430 273 72 22 chr20 10152189 10152328 -56515677 + Charlie8 DNA MER1_type 87 232 -2185 1888 160 7 13 chr20 10152999 10153299 -56514706 + AluJo SINE Alu 1 298 -14 654 381 34 16 chr20 10153962 10154578 -56513427 - HERV16 LTR ERVL -3421 1575 949 2587 146 27 2 chr20 10154578 10155024 -56512981 + LTR32 LTR ERVL 15 471 0 762 218 46 60 chr20 10156248 10156464 -56511541 + MER20 DNA MER1_type 6 218 -1 808 269 40 54 chr20 10156516 10156828 -56511177 + L1ME LINE L1 5311 5615 -555 579 239 9 0 chr20 10156828 10156937 -56511068 - MER81 DNA DNA -1 113 4 808 269 40 54 chr20 10156937 10157144 -56510861 + L1ME LINE L1 5615 5823 -347 1747 152 0 92 chr20 10157754 10158090 -56509915 - AluJb SINE Alu -7 305 1 1522 174 85 0 chr20 10158404 10158686 -56509319 - AluJb SINE Alu -2 310 5 875 247 136 59 chr20 10158772 10159278 -56508727 + MLT1H LTR MaLR 4 548 -1 266 354 75 12 chr20 10159498 10159681 -56508324 + MIR SINE MIR 10 204 -58 250 295 39 0 chr20 10159717 10159795 -56508210 + MIR SINE MIR 176 256 -6 1032 281 60 45 chr20 10159842 10160326 -56507679 + LTR16C LTR ERVL 1 491 0 399 318 164 44 chr20 10161821 10162487 -56505518 + L2 LINE L2 2560 3313 0 329 333 66 61 chr20 10162889 10163087 -56504918 + L2 LINE L2 3052 3250 -22 1724 223 43 3 chr20 10163087 10163478 -56504527 + MER82 DNA MER2_type 1 407 -246 22 35 0 0 chr20 10163605 10163634 -56504371 + AT_rich Low_complexity Low_complexity 1 29 0 5839 152 17 3 chr20 10163739 10165438 -56502567 + L1MA4 LINE L1 4577 6295 -5 7558 34 0 0 chr20 10165929 10167334 -56500671 + L1PA5 LINE L1 4741 6147 -7 232 0 0 0 chr20 10167403 10167439 -56500566 + L1HS LINE L1 6120 6155 0 1852 167 3 7 chr20 10168084 10168389 -56499616 + AluJb SINE Alu 1 304 -8 291 238 48 67 chr20 10168530 10168635 -56499370 + MIR SINE MIR 49 151 -111 180 77 0 0 chr20 10168803 10168829 -56499176 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 2207 104 0 22 chr20 10168885 10169202 -56498803 - AluSx SINE Alu -2 310 1 776 216 202 18 chr20 10171504 10171846 -56496159 + Charlie4a DNA MER1_type 25 429 -79 2521 194 24 6 chr20 10171867 10172399 -56495606 + L1MB5 LINE L1 5625 6166 -8 2431 79 0 19 chr20 10172648 10172965 -56495040 + AluSx SINE Alu 1 311 -1 822 254 103 151 chr20 10173499 10173620 -56494385 - L2 LINE L2 -350 2964 2839 1941 84 25 4 chr20 10173620 10173919 -56494086 + AluY SINE Alu 1 305 0 822 254 103 151 chr20 10173919 10174027 -56493978 - L2 LINE L2 -475 2839 2727 1860 126 32 3 chr20 10174027 10174312 -56493693 - AluSx SINE Alu -17 295 3 822 254 103 151 chr20 10174312 10174730 -56493275 - L2 LINE L2 -587 2727 2346 232 239 0 91 chr20 10174736 10174824 -56493181 + MLT1H LTR MaLR 8 87 -462 1111 255 104 12 chr20 10175681 10176085 -56491920 + MER69 DNA AcHobo 1 441 -785 1406 130 8 4 chr20 10176087 10176333 -56491672 + L1MA2 LINE L1 6058 6304 0 25 0 0 0 chr20 10176333 10176358 -56491647 + AT_rich Low_complexity Low_complexity 1 25 0 2324 219 65 29 chr20 10176566 10177499 -56490506 + MER69 DNA AcHobo 1457 2423 -103 1285 61 0 0 chr20 10177960 10178123 -56489882 + L1PA8 LINE L1 6005 6167 -5 2385 199 71 43 chr20 10178608 10178926 -56489079 - L1MC4a LINE L1 -470 7338 7030 267 79 0 0 chr20 10178926 10178964 -56489041 + (TTTA)n Simple_repeat Simple_repeat 4 41 0 2385 199 71 43 chr20 10178964 10179285 -56488720 - L1MC4a LINE L1 -778 7030 6674 1640 187 36 33 chr20 10179285 10179649 -56488356 + MLT1A1 LTR MaLR 1 365 0 2385 199 71 43 chr20 10179649 10179723 -56488282 - L1MC4a LINE L1 -1134 6674 6604 1227 206 77 36 chr20 10179757 10179999 -56488006 + L1MD3 LINE L1 7570 7835 -160 791 221 101 29 chr20 10179999 10180207 -56487798 + MER58A DNA MER1_type 1 223 -1 1227 206 77 36 chr20 10180207 10180352 -56487653 + L1MD3 LINE L1 7835 7973 -22 1377 96 0 6 chr20 10180352 10180529 -56487476 + AluY SINE Alu 118 293 -18 343 262 9 0 chr20 10180542 10180649 -56487356 + Charlie8 DNA MER1_type 62 169 -2248 351 246 116 101 chr20 10180697 10181043 -56486962 + MLT1J LTR MaLR 8 358 -153 1178 143 71 25 chr20 10181101 10181297 -56486708 + AluJb SINE Alu 95 299 -13 32 26 0 0 chr20 10181434 10181473 -56486532 + AT_rich Low_complexity Low_complexity 1 39 0 1302 159 72 4 chr20 10182513 10182790 -56485215 - MER33 DNA MER1_type -22 302 7 405 172 97 30 chr20 10183671 10183805 -56484200 - L1ME4a LINE L1 -5 6116 5974 258 390 25 8 chr20 10184346 10184464 -56483541 - L2 LINE L2 -15 3257 3138 467 97 10 40 chr20 10184571 10184665 -56483340 - L1MA9 LINE L1 -35 6256 6162 2080 146 7 0 chr20 10184666 10185027 -56482978 - AluSx SINE Alu 0 363 1 182 36 0 36 chr20 10185172 10185200 -56482805 + (TAAAAA)n Simple_repeat Simple_repeat 2 28 0 318 106 0 0 chr20 10185818 10185865 -56482140 + (CA)n Simple_repeat Simple_repeat 2 48 0 335 299 48 0 chr20 10186411 10186558 -56481447 + L1ME1 LINE L1 439 592 -6015 1294 238 12 56 chr20 10186610 10187022 -56480983 + L1ME1 LINE L1 590 983 -5624 931 120 0 23 chr20 10187023 10187156 -56480849 + AluSq/x SINE Alu 1 130 -183 2196 117 3 0 chr20 10187185 10187483 -56480522 - AluSp SINE Alu -14 299 1 435 289 39 26 chr20 10187483 10187715 -56480290 + L1ME1 LINE L1 1347 1581 -5026 461 227 81 38 chr20 10187715 10187900 -56480105 - MER95 LTR ERV 0 431 239 522 293 57 7 chr20 10188107 10188390 -56479615 + L1ME1 LINE L1 1404 1700 -4726 * 1433 211 65 12 chr20 10188371 10188871 -56479134 + L1ME1 LINE L1 2387 2868 -3558 2926 218 16 56 chr20 10188910 10189143 -56478862 + L1ME1 LINE L1 5576 5817 -797 2250 88 0 7 chr20 10189143 10189463 -56478542 + AluSc SINE Alu 1 318 0 2926 218 16 56 chr20 10189463 10190101 -56477904 + L1ME1 LINE L1 5817 6572 -42 225 0 0 0 chr20 10190101 10190126 -56477879 + (TG)n Simple_repeat Simple_repeat 2 26 0 569 221 16 0 chr20 10190167 10190294 -56477711 - MER3 DNA MER1_type -74 135 7 624 256 128 43 chr20 10191711 10192016 -56475989 + MLT1H LTR MaLR 25 355 -194 251 196 0 0 chr20 10192188 10192234 -56475771 + MIR3 SINE MIR 139 184 -24 242 292 0 0 chr20 10192508 10192573 -56475432 + GA-rich Low_complexity Low_complexity 3 67 0 476 321 6 22 chr20 10192769 10192949 -56475056 + MIR SINE MIR 30 205 -57 1729 176 0 28 chr20 10194368 10194728 -56473277 + AluJo SINE Alu 1 351 0 1739 218 47 18 chr20 10195064 10195555 -56472450 + MLT1D LTR MaLR 1 505 0 447 260 21 0 chr20 10196944 10197040 -56470965 - MER5A DNA MER1_type -80 109 12 464 204 2 0 chr20 10197728 10197832 -56470173 - L1ME3 LINE L1 -20 6150 6044 573 183 147 63 chr20 10197833 10198024 -56469981 + MER3 DNA MER1_type 3 209 0 13959 35 0 1 chr20 10198061 10199837 -56468168 + L1P LINE L1 3083 4857 -1289 675 217 15 40 chr20 10199907 10199999 -56468006 - L1ME3 LINE L1 -25 6137 6044 731 174 117 61 chr20 10199999 10200195 -56467810 + MER3 DNA MER1_type 3 209 0 675 217 15 40 chr20 10200195 10200300 -56467705 - L1ME3 LINE L1 -118 6044 5945 228 191 24 0 chr20 10200972 10201014 -56466991 + MER5C DNA MER1_type 34 76 -248 227 301 14 0 chr20 10201150 10201223 -56466782 - MER5C DNA MER1_type -250 74 1 27 49 0 0 chr20 10201629 10201670 -56466335 + AT_rich Low_complexity Low_complexity 1 41 0 358 334 104 46 chr20 10201839 10202273 -56465732 - LTR67 LTR ERVL -4 553 95 214 232 28 160 chr20 10203176 10203357 -56464648 - L2 LINE L2 -10 3303 3147 228 409 44 10 chr20 10203384 10203587 -56464418 - L2 LINE L2 -252 3061 2852 555 280 54 6 chr20 10203636 10203804 -56464201 - L2 LINE L2 -579 2735 2560 595 127 28 4 chr20 10203808 10203931 -56464074 + L1MA5 LINE L1 6164 6294 -3 1283 221 91 47 chr20 10204010 10204525 -56463480 + MLT1H LTR MaLR 12 549 0 953 183 14 10 chr20 10205107 10205315 -56462690 + LTR16A1 LTR ERVL 247 455 -2 2904 170 55 86 chr20 10205452 10206165 -56461840 - LTR8 LTR ERV1 0 691 1 335 272 167 0 chr20 10207200 10207362 -56460643 + L2 LINE L2 3120 3308 -5 913 188 54 89 chr20 10207724 10208060 -56459945 + MER33 DNA MER1_type 1 324 0 1402 271 30 12 chr20 10208100 10208506 -56459499 + LTR16C LTR ERVL 79 491 0 528 251 79 54 chr20 10209803 10210006 -56457999 - MER63A DNA MER1_type -1 209 2 484 158 79 10 chr20 10210770 10210871 -56457134 - MER5A DNA MER1_type -38 151 44 1855 157 0 7 chr20 10211942 10212222 -56455783 - AluSx SINE Alu 0 312 35 1651 169 14 35 chr20 10212617 10212984 -56455021 + L1MA10 LINE L1 4439 4797 -1349 343 224 26 26 chr20 10212988 10213104 -56454901 + L1MA9 LINE L1 6167 6282 -30 348 203 0 40 chr20 10213114 10213188 -56454817 - L1MC3 LINE L1 -652 7133 7063 4677 185 24 34 chr20 10213197 10214750 -56453255 + L1MA10 LINE L1 4793 6333 -1 1943 231 59 82 chr20 10214988 10215880 -56452125 - L1MC4 LINE L1 0 8042 7171 233 302 23 12 chr20 10216472 10216558 -56451447 + MLT1I LTR MaLR 315 401 -8 375 250 152 8 chr20 10216787 10216919 -56451086 - MER63A DNA MER1_type -2 208 58 415 225 45 9 chr20 10217113 10217224 -56450781 + L1ME3A LINE L1 5651 5765 -405 2376 96 0 0 chr20 10217224 10217527 -56450478 + AluSc SINE Alu 1 303 -6 248 232 40 0 chr20 10217527 10217626 -56450379 + (TA)n Simple_repeat Simple_repeat 2 104 0 240 208 30 0 chr20 10217639 10217740 -56450265 + (TA)n Simple_repeat Simple_repeat 2 105 0 304 226 118 54 chr20 10217748 10217841 -56450164 + L1MC4 LINE L1 6613 6711 -1331 864 219 94 58 chr20 10217848 10218176 -56449829 + L1ME3A LINE L1 5791 6130 -40 342 304 225 25 chr20 10218647 10218887 -56449118 + L2 LINE L2 3006 3293 -20 1155 132 13 9 chr20 10219061 10219280 -56448725 + L1PA16 LINE L1 5668 5886 -280 251 128 0 0 chr20 10219491 10219530 -56448475 - L1PA11 LINE L1 -9 6165 6127 908 134 56 0 chr20 10219534 10219756 -56448249 + L1PA16 LINE L1 5894 6157 -9 2122 125 0 25 chr20 10219783 10220103 -56447902 + AluSx SINE Alu 1 312 0 23 0 0 0 chr20 10220205 10220228 -56447777 + AT_rich Low_complexity Low_complexity 1 23 0 2538 284 69 14 chr20 10221248 10222101 -56445904 - L2 LINE L2 -1522 1792 893 353 266 26 88 chr20 10222378 10222491 -56445514 - MIR3 SINE MIR -28 180 80 360 167 26 13 chr20 10222550 10222628 -56445377 - MER116 DNA Mariner -1 79 1 1768 159 7 45 chr20 10222694 10223003 -56445002 - AluJb SINE Alu -15 297 1 1765 176 7 3 chr20 10223048 10223344 -56444661 + AluJb SINE Alu 10 306 -6 396 267 50 0 chr20 10224112 10224232 -56443773 + LTR16C LTR ERVL 147 272 -219 1814 44 0 9 chr20 10224519 10224745 -56443260 - L1PA5 LINE L1 0 6154 5931 603 285 84 0 chr20 10225017 10225196 -56442809 - MIR SINE MIR -48 214 21 1726 220 126 35 chr20 10225611 10225988 -56442017 + L1ME2 LINE L1 5441 5782 -382 1738 101 7 47 chr20 10225988 10226266 -56441739 + AluY SINE Alu 45 311 0 1726 220 126 35 chr20 10226266 10226546 -56441459 + L1ME2 LINE L1 5782 6158 -6 186 71 0 0 chr20 10226815 10226843 -56441162 + (TTTTTA)n Simple_repeat Simple_repeat 2 29 0 544 301 75 19 chr20 10227354 10227567 -56440438 - MIR SINE MIR -18 244 20 317 273 239 17 chr20 10227596 10227710 -56440295 - L2 LINE L2 0 3313 3226 1884 199 127 40 chr20 10227710 10228228 -56439777 + MLT1F1 LTR MaLR 1 563 -4 317 273 239 17 chr20 10228228 10228351 -56439654 - L2 LINE L2 -87 3226 3023 418 209 0 55 chr20 10228359 10228450 -56439555 + FLAM_A SINE Alu 1 86 -56 252 314 43 71 chr20 10228467 10228539 -56439466 - L2 LINE L2 -1366 1948 1875 2354 119 28 0 chr20 10228539 10228893 -56439112 + THE1B LTR MaLR 1 364 0 252 314 43 71 chr20 10228893 10229030 -56438975 - L2 LINE L2 -1439 1875 1745 1582 227 0 3 chr20 10229516 10229820 -56438185 - AluJo SINE Alu -9 303 1 31 26 0 0 chr20 10230632 10230670 -56437335 + AT_rich Low_complexity Low_complexity 1 38 0 250 188 71 24 chr20 10231777 10231862 -56436143 - Charlie7 DNA MER1_type -25 2587 2499 2137 257 67 36 chr20 10232776 10233607 -56434398 + L2 LINE L2 2250 3096 -217 391 253 0 0 chr20 10233727 10233818 -56434187 - MER104 DNA Tc2 -89 91 1 341 333 91 38 chr20 10233930 10234116 -56433889 - L2 LINE L2 -1 3271 3076 2249 110 3 22 chr20 10234199 10234518 -56433487 - AluSp SINE Alu 0 313 1 376 269 39 105 chr20 10235506 10235811 -56432194 - L2 LINE L2 -880 2434 2150 205 200 0 0 chr20 10236064 10236104 -56431901 + A-rich Low_complexity Low_complexity 1 40 0 287 327 10 0 chr20 10237278 10237382 -56430623 - MLT1L LTR MaLR -165 450 346 248 185 19 19 chr20 10237490 10237544 -56430461 - LTR67 LTR ERVL -405 152 99 377 236 135 1 chr20 10237788 10237921 -56430084 - L1ME2 LINE L1 0 6164 6016 285 292 0 0 chr20 10238445 10238517 -56429488 - MIR SINE MIR -120 142 71 416 346 28 11 chr20 10238533 10238715 -56429290 + L2 LINE L2 2837 3021 -292 262 173 96 0 chr20 10238816 10238868 -56429137 + MIR SINE MIR 90 146 -116 366 23 0 0 chr20 10238902 10238945 -56429060 + (TG)n Simple_repeat Simple_repeat 2 44 0 1097 152 33 6 chr20 10238954 10239227 -56428778 + MER63 DNA MER1_type 1 974 -86 1652 174 24 0 chr20 10241792 10242079 -56425926 - AluJo SINE Alu -16 296 3 397 340 82 42 chr20 10242256 10242706 -56425299 + L2 LINE L2 2013 2480 -834 270 324 95 56 chr20 10243119 10243403 -56424602 + L2 LINE L2 2920 3214 -58 302 0 0 0 chr20 10244769 10244806 -56423199 - L1P LINE L1 -792 5339 5303 6262 75 4 4 chr20 10244806 10245634 -56422371 + L1PA8 LINE L1 5336 6165 -7 250 355 152 15 chr20 10245636 10245971 -56422034 - L2 LINE L2 -2216 1098 718 280 232 43 0 chr20 10246832 10246901 -56421104 + L2 LINE L2 3241 3312 -1 517 312 144 40 chr20 10247342 10248126 -56419879 - L2 LINE L2 -12 3301 2430 3542 30 0 0 chr20 10248152 10248597 -56419408 - L1P2 LINE L1 -480 5674 5230 2793 44 0 0 chr20 10248597 10248934 -56419071 + L1PA5 LINE L1 5809 6147 -7 183 100 0 0 chr20 10248965 10248995 -56419010 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 876 309 215 38 chr20 10248997 10250072 -56417933 - L2 LINE L2 -907 2407 1098 869 191 11 37 chr20 10250072 10250260 -56417745 + MER5A DNA MER1_type 4 186 -3 876 309 215 38 chr20 10250260 10250379 -56417626 - L2 LINE L2 -2216 1098 1001 324 334 169 20 chr20 10250645 10250989 -56417016 + L3 LINE CR1 829 1223 -354 1111 171 6 0 chr20 10251073 10251249 -56416756 + AluSc SINE Alu 131 307 -2 26 30 0 0 chr20 10252600 10252633 -56415372 + AT_rich Low_complexity Low_complexity 1 33 0 228 134 15 45 chr20 10252757 10252824 -56415181 + (CATATA)n Simple_repeat Simple_repeat 2 66 0 21 36 0 0 chr20 10252866 10252894 -56415111 + AT_rich Low_complexity Low_complexity 1 28 0 258 105 0 0 chr20 10254179 10254217 -56413788 + (TATATG)n Simple_repeat Simple_repeat 1 38 0 499 240 212 7 chr20 10255343 10255489 -56412516 + MER5A DNA MER1_type 14 189 0 182 328 0 45 chr20 10255512 10255579 -56412426 + MER5A DNA MER1_type 39 102 -87 1750 207 22 5 chr20 10255643 10256044 -56411961 + L1MB7 LINE L1 4784 5191 -955 852 166 0 14 chr20 10256049 10256194 -56411811 + FLAM_C SINE Alu 1 143 0 4332 154 28 33 chr20 10256200 10257134 -56410871 + L1MB7 LINE L1 5185 6110 -74 1949 140 7 0 chr20 10257260 10257415 -56410590 - AluSx SINE Alu -25 287 128 243 0 0 0 chr20 10257415 10257442 -56410563 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1949 140 7 0 chr20 10257442 10257571 -56410434 - AluSx SINE Alu -184 128 1 2542 196 33 4 chr20 10258053 10258544 -56409461 - MLT1D LTR MaLR 0 505 1 317 313 90 17 chr20 10258633 10258888 -56409117 + L1ME LINE L1 5473 5749 -415 645 266 149 34 chr20 10258890 10259045 -56408960 + MLT1J2 LTR MaLR 1 137 -313 261 0 0 0 chr20 10259045 10259074 -56408931 + (TAA)n Simple_repeat Simple_repeat 2 30 0 645 266 149 34 chr20 10259074 10259267 -56408738 + MLT1J2 LTR MaLR 137 389 -61 2595 173 99 24 chr20 10259601 10260186 -56407819 + L1MB7 LINE L1 5556 6184 0 266 264 11 65 chr20 10260443 10260561 -56407444 + MER5B DNA MER1_type 7 129 -60 180 354 0 31 chr20 10260588 10260684 -56407321 - L3 LINE CR1 -565 1012 920 279 285 208 0 chr20 10261395 10261525 -56406480 + MER5B DNA MER1_type 1 157 -21 1225 197 104 7 chr20 10261573 10261852 -56406153 + AluJb SINE Alu 1 306 -6 374 169 24 0 chr20 10262115 10262198 -56405807 + (CATA)n Simple_repeat Simple_repeat 2 86 0 322 301 73 15 chr20 10263133 10263269 -56404736 + MIR SINE MIR 25 168 -94 284 214 29 14 chr20 10263379 10263449 -56404556 - L2 LINE L2 -9 3304 3234 1934 223 74 67 chr20 10263451 10263980 -56404025 + L1ME1 LINE L1 5175 5713 -453 1469 141 11 0 chr20 10263980 10264249 -56403756 + L1MA4 LINE L1 6029 6300 0 1934 223 74 67 chr20 10264249 10264627 -56403378 + L1ME1 LINE L1 5713 6087 -79 1167 212 111 12 chr20 10264798 10265222 -56402783 + L1ME3A LINE L1 5665 6160 -10 322 336 49 30 chr20 10265230 10265560 -56402445 - L2 LINE L2 -208 3105 2717 953 233 28 31 chr20 10265727 10266044 -56401961 - HsTC2 DNA Tc2 -7 1891 1576 2560 139 21 16 chr20 10266130 10266560 -56401445 - MSTB1 LTR MaLR 0 432 1 274 125 0 0 chr20 10267465 10267505 -56400500 + LTR56 LTR ERV1 349 388 -57 26 0 0 0 chr20 10267505 10267531 -56400474 + AT_rich Low_complexity Low_complexity 1 26 0 197 240 0 20 chr20 10267531 10267581 -56400424 + MIR SINE MIR 136 184 -78 2234 190 102 39 chr20 10267620 10268097 -56399908 + MLT2B1 LTR ERVL 1 414 0 784 167 0 0 chr20 10268283 10268403 -56399602 + FLAM_A SINE Alu 1 120 -13 27 49 0 0 chr20 10268414 10268455 -56399550 + AT_rich Low_complexity Low_complexity 1 41 0 181 263 75 0 chr20 10268621 10268701 -56399304 - MIR SINE MIR -4 258 173 * 368 261 89 64 chr20 10268685 10268888 -56399117 - L2 LINE L2 0 3313 3106 224 365 65 6 chr20 10268913 10269083 -56398922 - MIR SINE MIR -81 181 2 2178 159 27 12 chr20 10269365 10269767 -56398238 + MER31A LTR ERV1 61 468 -17 1181 296 47 54 chr20 10270854 10271425 -56396580 + MLT1K LTR MaLR 13 579 -9 184 159 0 68 chr20 10271675 10271719 -56396286 + L2 LINE L2 1783 1823 -1491 288 351 97 12 chr20 10271820 10271985 -56396020 - L2 LINE L2 0 3272 3094 2200 102 10 0 chr20 10272382 10272676 -56395329 + AluSx SINE Alu 1 297 -15 1985 133 7 13 chr20 10273289 10273591 -56394414 + AluSx SINE Alu 1 300 -12 1117 256 185 19 chr20 10274017 10274247 -56393758 + LTR16C LTR ERVL 69 260 -231 1412 190 28 104 chr20 10274247 10274642 -56393363 + MLT1A1 LTR MaLR 1 365 0 2261 120 34 0 chr20 10274647 10274997 -56393008 + THE1B LTR MaLR 1 362 -2 1117 256 185 19 chr20 10274997 10275123 -56392882 + LTR16C LTR ERVL 263 491 0 402 349 8 0 chr20 10275241 10275367 -56392638 + MIR SINE MIR 133 259 -3 828 165 0 0 chr20 10275554 10275681 -56392324 + FLAM_C SINE Alu 1 127 -6 431 237 91 56 chr20 10275873 10276105 -56391900 + L2 LINE L2 2953 3192 -121 22 0 0 0 chr20 10277083 10277105 -56390900 + AT_rich Low_complexity Low_complexity 1 22 0 453 175 30 228 chr20 10277219 10277487 -56390518 - MER102a DNA MER1_type 0 330 116 446 293 57 0 chr20 10278699 10278822 -56389183 - L2 LINE L2 0 3272 3143 2253 74 3 14 chr20 10279107 10279417 -56388588 - AluSx SINE Alu 0 307 1 189 195 0 0 chr20 10280108 10280149 -56387856 + CT-rich Low_complexity Low_complexity 2 42 0 860 217 42 0 chr20 10280946 10281135 -56386870 - MER115 DNA AcHobo 0 693 497 247 311 76 15 chr20 10281168 10281300 -56386705 - MER115 DNA AcHobo -262 431 292 247 296 97 38 chr20 10281289 10281475 -56386530 - MER115 DNA AcHobo -475 218 22 190 314 20 0 chr20 10281476 10281527 -56386478 - L3b LINE CR1 -241 1342 1291 207 0 0 0 chr20 10282213 10282236 -56385769 + (GTTTG)n Simple_repeat Simple_repeat 2 24 0 186 133 0 0 chr20 10282489 10282519 -56385486 + (TG)n Simple_repeat Simple_repeat 2 31 0 405 182 25 50 chr20 10282532 10282653 -56385352 + LTR67 LTR ERVL 440 557 0 225 263 35 0 chr20 10282653 10282710 -56385295 + L2 LINE L2 3214 3272 0 1866 167 0 0 chr20 10282797 10283090 -56384915 - AluJb SINE Alu -19 293 1 546 290 71 45 chr20 10283120 10283557 -56384448 - L1ME4a LINE L1 -73 6048 5583 1898 148 3 17 chr20 10283557 10283854 -56384151 - AluSx SINE Alu -18 294 2 546 290 71 45 chr20 10283854 10284174 -56383831 - L1ME4a LINE L1 -538 5583 5273 264 279 51 0 chr20 10284559 10284638 -56383367 - L1ME4a LINE L1 -1314 4832 4750 222 237 10 52 chr20 10284673 10284770 -56383235 + C-rich Low_complexity Low_complexity 2 94 0 * 244 302 16 28 chr20 10284721 10284903 -56383102 + (CCA)n Simple_repeat Simple_repeat 1 180 0 330 277 71 22 chr20 10284991 10285175 -56382830 - L1ME4a LINE L1 -1556 4590 4398 33 56 0 0 chr20 10286052 10286106 -56381899 + AT_rich Low_complexity Low_complexity 1 54 0 209 286 114 0 chr20 10286135 10286205 -56381800 + L2 LINE L2 3187 3264 -8 186 292 0 0 chr20 10286450 10286498 -56381507 - L2 LINE L2 -1 3312 3265 467 287 164 60 chr20 10286612 10287141 -56380864 - L2 LINE L2 -338 2976 2393 1665 227 68 20 chr20 10287523 10287964 -56380041 + MLT1C LTR MaLR 6 467 0 432 300 19 44 chr20 10288087 10288246 -56379759 - MIR SINE MIR -66 196 43 243 88 0 0 chr20 10289472 10289506 -56378499 + (CA)n Simple_repeat Simple_repeat 1 34 0 306 190 101 0 chr20 10290681 10290760 -56377245 - MER5A DNA MER1_type -77 112 26 916 316 65 8 chr20 10292171 10292522 -56375483 - LTR16A LTR ERVL -79 371 1 2244 84 19 13 chr20 10293459 10293805 -56374200 + AluSx SINE Alu 1 348 0 1857 273 72 51 chr20 10293890 10293929 -56374076 + HAL1b LINE L1 115 152 -1196 785 231 53 48 chr20 10293929 10294137 -56373868 - MER63A DNA MER1_type 0 210 2 1857 273 72 51 chr20 10294137 10295304 -56372701 + HAL1b LINE L1 152 1346 -2 543 265 34 0 chr20 10295374 10295491 -56372514 + FLAM_A SINE Alu 1 121 -21 21 0 0 0 chr20 10295491 10295512 -56372493 + AT_rich Low_complexity Low_complexity 1 21 0 392 296 33 29 chr20 10295582 10295856 -56372149 + L1MD2 LINE L1 3249 3523 -2623 3755 230 44 64 chr20 10295971 10296140 -56371865 + L1MD2 LINE L1 3533 3704 -2442 511 149 0 0 chr20 10296140 10296214 -56371791 - AluSp SINE Alu -96 217 144 3755 230 44 64 chr20 10296214 10297409 -56370596 + L1MD2 LINE L1 3704 4946 -1200 4727 194 44 23 chr20 10297450 10297686 -56370319 + L1MB3 LINE L1 4018 4248 -1935 183 80 0 0 chr20 10297686 10297711 -56370294 + (CA)n Simple_repeat Simple_repeat 1 25 0 4727 194 44 23 chr20 10297711 10297921 -56370084 + L1MB3 LINE L1 4248 4452 -1731 2111 114 23 3 chr20 10297921 10298096 -56369909 - AluSx SINE Alu -7 305 120 387 0 0 0 chr20 10298096 10298139 -56369866 + (TG)n Simple_repeat Simple_repeat 2 44 0 2111 114 23 3 chr20 10298139 10298262 -56369743 - AluSx SINE Alu -192 120 1 4727 194 44 23 chr20 10298262 10298292 -56369713 + L1MB3 LINE L1 4452 4480 -1703 1983 141 116 38 chr20 10298292 10298689 -56369316 + MSTA LTR MaLR 1 428 0 4727 194 44 23 chr20 10298689 10300344 -56367661 + L1MB3 LINE L1 4480 6183 0 4000 196 53 21 chr20 10300336 10301001 -56367004 + L1MD2 LINE L1 4944 5669 -690 * 1446 199 75 41 chr20 10301001 10301363 -56366642 + MLT1A2 LTR MaLR 1 374 0 4000 196 53 21 chr20 10301363 10301844 -56366161 + L1MD2 LINE L1 5669 6133 -226 260 24 0 71 chr20 10301873 10301915 -56366090 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 232 121 0 0 chr20 10301916 10301949 -56366056 + Alu SINE Alu 130 162 -140 417 122 56 0 chr20 10301951 10302041 -56365964 + (TATG)n Simple_repeat Simple_repeat 2 96 0 414 146 37 0 chr20 10302064 10302146 -56365859 + (TA)n Simple_repeat Simple_repeat 2 86 0 210 37 0 0 chr20 10302146 10302173 -56365832 + (GA)n Simple_repeat Simple_repeat 2 28 0 643 207 52 0 chr20 10302174 10302309 -56365696 + L1MD2 LINE L1 6151 6292 -67 699 134 90 0 chr20 10302309 10302443 -56365562 + L1MD1 LINE L1 6091 6236 -6 2057 105 0 0 chr20 10302457 10302724 -56365281 + AluSq SINE Alu 1 267 -46 252 22 43 22 chr20 10302727 10302773 -56365232 + (TAAAA)n Simple_repeat Simple_repeat 4 50 0 893 154 101 0 chr20 10302773 10302922 -56365083 + AluSg/x SINE Alu 131 294 -18 363 342 117 68 chr20 10302954 10302982 -56365023 - L2 LINE L2 -13 3259 3234 1198 166 50 0 chr20 10302982 10303181 -56364824 + MER3 DNA MER1_type 1 209 0 363 342 117 68 chr20 10303181 10303718 -56364287 - L2 LINE L2 -38 3234 2725 1410 183 21 28 chr20 10303718 10304078 -56363927 + AluJo SINE Alu 1 358 0 363 342 117 68 chr20 10304078 10304767 -56363238 - L2 LINE L2 -547 2725 1964 1411 177 40 22 chr20 10304823 10305100 -56362905 + AluJo SINE Alu 1 282 -30 22 0 0 0 chr20 10306511 10306533 -56361472 + AT_rich Low_complexity Low_complexity 1 22 0 306 317 29 9 chr20 10306554 10306708 -56361297 + MIR SINE MIR 19 176 -66 236 252 36 18 chr20 10306812 10306877 -56361128 - MER5A DNA MER1_type -1 188 112 272 309 48 0 chr20 10306970 10307054 -56360951 + LTR16A LTR ERVL 16 103 -347 * 435 262 8 8 chr20 10307050 10307172 -56360833 + LTR16A LTR ERVL 329 450 0 204 306 139 56 chr20 10307765 10307873 -56360132 - MIR SINE MIR -109 153 37 21 57 0 0 chr20 10307882 10307917 -56360088 + AT_rich Low_complexity Low_complexity 1 35 0 1862 129 7 3 chr20 10307934 10308229 -56359776 + L1MC1 LINE L1 6037 6332 -1 353 300 32 8 chr20 10309132 10309297 -56358708 + MER68 LTR ERV1 416 544 -18 1479 243 27 17 chr20 10309298 10309710 -56358295 - L1ME3A LINE L1 -114 6056 5641 20677 26 0 0 chr20 10309711 10312946 -56355059 + L1PA2 LINE L1 2921 6155 0 24 0 0 0 chr20 10312946 10312970 -56355035 + AT_rich Low_complexity Low_complexity 1 24 0 879 285 65 31 chr20 10312970 10313261 -56354744 - LTR16C LTR ERVL -122 369 69 1029 253 101 27 chr20 10313641 10314009 -56353996 - MLT1J LTR MaLR -109 402 8 617 147 108 0 chr20 10315748 10315850 -56352155 + FRAM SINE Alu 40 152 -24 893 125 0 0 chr20 10316370 10316490 -56351515 + FLAM_C SINE Alu 1 120 -23 768 337 55 37 chr20 10317185 10317621 -56350384 - L2 LINE L2 -449 2865 2422 947 308 56 17 chr20 10317730 10318090 -56349915 - LTR16C LTR ERVL -14 477 104 281 383 42 12 chr20 10318513 10318680 -56349325 + L3 LINE CR1 565 736 -841 357 272 201 38 chr20 10320573 10320757 -56347248 + MIR SINE MIR 48 261 -1 448 278 107 51 chr20 10320984 10321200 -56346805 - MLT1J2 LTR MaLR -221 229 2 24 32 0 0 chr20 10321707 10321738 -56346267 + AT_rich Low_complexity Low_complexity 1 31 0 259 312 21 0 chr20 10321835 10321928 -56346077 - MIR SINE MIR 0 262 168 1512 163 67 50 chr20 10321929 10322286 -56345719 + THE1C LTR MaLR 1 363 -12 581 265 46 0 chr20 10322290 10322441 -56345564 - MIR SINE MIR -90 172 15 632 211 6 43 chr20 10323303 10323370 -56344635 + L1MA10 LINE L1 6172 6240 -94 405 0 0 0 chr20 10323370 10323415 -56344590 + (TG)n Simple_repeat Simple_repeat 1 45 0 632 211 6 43 chr20 10323415 10323508 -56344497 + L1MA10 LINE L1 6240 6326 -8 2024 174 93 86 chr20 10323918 10324292 -56343713 + LTR8A LTR ERV1 1 382 -345 2225 100 0 13 chr20 10324292 10324592 -56343413 - AluY SINE Alu -14 297 2 2024 174 93 86 chr20 10324592 10324796 -56343209 + LTR8A LTR ERV1 382 583 -144 1553 188 134 27 chr20 10324796 10325248 -56342757 + LTR10A LTR ERV1 1 548 -61 737 175 6 81 chr20 10325261 10325421 -56342584 + LTR8A LTR ERV1 580 727 0 4483 269 67 54 chr20 10325428 10325486 -56342519 + L1M4b LINE L1 12 68 -6889 189 107 0 0 chr20 10325486 10325514 -56342491 + (TA)n Simple_repeat Simple_repeat 1 28 0 4483 269 67 54 chr20 10325514 10327127 -56340878 + L1M4b LINE L1 68 1659 -5298 2332 144 21 82 chr20 10327127 10327691 -56340314 + L1MC2 LINE L1 5815 6344 0 4483 269 67 54 chr20 10327691 10329582 -56338423 + L1M4b LINE L1 1659 3618 -3339 1310 184 77 45 chr20 10329581 10329917 -56338088 + L1MB8 LINE L1 5831 6177 -1 * 350 310 60 71 chr20 10329939 10330488 -56337517 + L1M4 LINE L1 2392 2934 -3212 1894 119 7 11 chr20 10330562 10330848 -56337157 + AluSx SINE Alu 27 311 -1 503 296 157 9 chr20 10331254 10331572 -56336433 + LTR33A LTR ERVL 82 446 -77 5423 134 19 8 chr20 10331839 10332732 -56335273 - L1MA5 LINE L1 -6 6294 5392 1865 155 31 0 chr20 10332733 10333023 -56334982 - AluJb SINE Alu -3 309 11 5209 211 66 34 chr20 10333030 10334612 -56333393 - L1MA5 LINE L1 -864 5282 3650 280 155 14 84 chr20 10334621 10334692 -56333313 + L1MC4a LINE L1 5841 5906 -1902 33 0 0 0 chr20 10334736 10334769 -56333236 + AT_rich Low_complexity Low_complexity 1 33 0 1750 166 3 17 chr20 10334769 10335065 -56332940 - AluJo SINE Alu -20 292 1 592 325 42 14 chr20 10335234 10335446 -56332559 + MIR SINE MIR 20 237 -25 204 132 0 26 chr20 10336549 10336587 -56331418 + (TGGA)n Simple_repeat Simple_repeat 4 40 0 23 89 0 11 chr20 10336799 10336850 -56331155 + AT_rich Low_complexity Low_complexity 1 52 -37 2064 112 0 0 chr20 10336850 10337128 -56330877 + AluSq SINE Alu 18 295 -18 23 89 0 11 chr20 10337128 10337166 -56330839 + AT_rich Low_complexity Low_complexity 52 89 0 355 291 18 0 chr20 10337464 10337574 -56330431 - LTR67 LTR ERVL 0 557 446 422 265 0 10 chr20 10337710 10337808 -56330197 - Tigger1 DNA MER2_type 0 2418 2322 12528 120 25 12 chr20 10337995 10339817 -56328188 - Tigger1 DNA MER2_type -455 1963 112 2175 121 10 0 chr20 10339817 10340122 -56327883 + AluSx SINE Alu 1 308 -4 12528 120 25 12 chr20 10340122 10340234 -56327771 - Tigger1 DNA MER2_type -2306 112 3 1018 187 12 32 chr20 10340249 10340495 -56327510 - L1MA9 LINE L1 -5 6307 6067 2679 96 3 3 chr20 10340562 10340926 -56327079 - THE1B LTR MaLR 0 364 1 256 247 62 25 chr20 10341037 10341118 -56326887 - LTR67 LTR ERVL -378 179 96 724 219 173 7 chr20 10341127 10341405 -56326600 + MER5C DNA MER1_type 1 324 0 325 311 102 28 chr20 10341473 10341650 -56326355 + HAL1b LINE L1 537 726 -622 2264 251 25 2 chr20 10341710 10342225 -56325780 + MLT1F LTR MaLR 1 527 -15 1888 151 136 18 chr20 10342225 10342608 -56325397 - MSTA LTR MaLR 0 428 1 274 122 0 0 chr20 10342627 10342668 -56325337 + MLT1F LTR MaLR 502 542 0 52 0 0 0 chr20 10342678 10342730 -56325275 + AT_rich Low_complexity Low_complexity 1 52 0 234 0 0 0 chr20 10343013 10343039 -56324966 + (T)n Simple_repeat Simple_repeat 1 26 0 2111 145 20 73 chr20 10344144 10344394 -56323611 - MSTB LTR MaLR 0 426 205 2117 129 0 3 chr20 10344394 10344704 -56323301 - AluSc SINE Alu 0 309 1 2111 145 20 73 chr20 10344704 10344861 -56323144 - MSTB LTR MaLR -221 205 41 4563 129 71 13 chr20 10345216 10346036 -56321969 + L1MA4A LINE L1 5433 6299 -4 1737 112 62 25 chr20 10346397 10346706 -56321299 - AluSx SINE Alu 0 319 1 305 323 74 69 chr20 10346718 10346907 -56321098 + L2 LINE L2 3081 3270 -2 208 233 0 137 chr20 10348073 10348146 -56319859 - MER5A DNA MER1_type -6 183 121 212 344 147 8 chr20 10349236 10349495 -56318510 - L2 LINE L2 -1076 2238 1944 389 282 30 30 chr20 10349617 10349748 -56318257 - MIR SINE MIR -109 153 23 1716 235 104 2 chr20 10350870 10351494 -56316511 - L1ME2 LINE L1 -2 6162 5449 364 309 153 19 chr20 10351801 10352155 -56315850 + MLT1H LTR MaLR 1 434 -115 470 217 0 0 chr20 10352195 10352278 -56315727 + MER58A DNA MER1_type 1 83 -24 888 198 47 6 chr20 10352293 10352465 -56315540 - MLT1A1 LTR MaLR -17 348 170 1400 137 25 0 chr20 10352556 10352797 -56315208 - L1MA4 LINE L1 -26 6274 6028 314 160 21 160 chr20 10352797 10352891 -56315114 - MSTC LTR MaLR -284 81 1 523 163 39 137 chr20 10352900 10353053 -56314952 + MER58A DNA MER1_type 86 223 -1 398 93 0 0 chr20 10353055 10353109 -56314896 + MLT1H LTR MaLR 496 549 0 220 310 35 0 chr20 10353223 10353281 -56314724 - L2 LINE L2 -79 3193 3134 392 233 34 10 chr20 10353494 10353629 -56314376 + L1ME1 LINE L1 6022 6148 -18 832 270 75 40 chr20 10354358 10354706 -56313299 + Charlie7 DNA MER1_type 135 494 -2118 600 219 158 6 chr20 10355109 10355273 -56312732 - MER5A DNA MER1_type 0 189 1 420 272 154 0 chr20 10355858 10355994 -56312011 - MIR SINE MIR -17 245 89 253 297 0 0 chr20 10355994 10356058 -56311947 + MLT1J LTR MaLR 1 64 -447 824 172 0 0 chr20 10356104 10356226 -56311779 + FLAM_C SINE Alu 1 122 -21 244 219 16 16 chr20 10356248 10356312 -56311693 + MLT1J1 LTR MaLR 76 139 -307 501 256 56 73 chr20 10356431 10356678 -56311327 + MLT1J LTR MaLR 288 507 -4 521 283 85 24 chr20 10357047 10357259 -56310746 - L2 LINE L2 -3 3310 3086 2666 97 85 7 chr20 10357263 10357295 -56310710 - MLT2A1 LTR ERVL 0 444 416 2073 114 4 4 chr20 10357295 10357576 -56310429 + AluSx SINE Alu 16 296 -16 414 0 0 0 chr20 10357580 10357626 -56310379 + (TA)n Simple_repeat Simple_repeat 2 47 0 2666 97 85 7 chr20 10357626 10358000 -56310005 - MLT2A1 LTR ERVL -30 414 1 829 306 101 32 chr20 10359161 10359537 -56308468 - LTR16A1 LTR ERVL -11 446 45 2125 118 28 23 chr20 10359646 10360037 -56307968 - L1MA3 LINE L1 0 6305 5913 230 377 14 0 chr20 10360376 10360445 -56307560 + L2 LINE L2 3203 3272 0 329 281 98 58 chr20 10360514 10360738 -56307267 - MER102a DNA MER1_type -14 316 84 5257 146 27 49 chr20 10361317 10362716 -56305289 - L1PA16 LINE L1 0 6166 4765 1372 237 17 10 chr20 10363030 10363330 -56304675 - LTR16C LTR ERVL -3 488 187 209 235 353 0 chr20 10364406 10364508 -56303497 - MER5A DNA MER1_type 0 189 52 31 20 0 20 chr20 10365075 10365090 -56302915 + AT_rich Low_complexity Low_complexity 1 15 -33 815 129 22 7 chr20 10365090 10365229 -56302776 - L1PA16 LINE L1 -2 6164 6024 31 20 0 20 chr20 10365229 10365262 -56302743 + AT_rich Low_complexity Low_complexity 15 48 0 1072 162 5 0 chr20 10365262 10365459 -56302546 - L1PB1 LINE L1 -3 6148 5951 2285 207 72 53 chr20 10365570 10366269 -56301736 + L1ME2 LINE L1 5443 6154 -10 446 272 32 8 chr20 10367125 10367260 -56300745 - MER5B DNA MER1_type 0 178 47 819 206 44 50 chr20 10367272 10367326 -56300679 + MER5A DNA MER1_type 1 54 -135 2260 85 3 3 chr20 10367326 10367620 -56300385 - AluSc SINE Alu -13 296 3 819 206 44 50 chr20 10367620 10367745 -56300260 + MER5A DNA MER1_type 54 179 -10 376 227 0 15 chr20 10369407 10369473 -56298532 + MER58A DNA MER1_type 1 65 -42 456 160 0 50 chr20 10369553 10369653 -56298352 - AluJ/FRAM SINE Alu 0 312 218 822 155 0 0 chr20 10369653 10369769 -56298236 - AluJo/FLAM SINE Alu -192 120 5 522 257 22 15 chr20 10369769 10369905 -56298100 + MER58A DNA MER1_type 88 224 0 994 311 56 0 chr20 10370436 10370742 -56297263 + MLT1H LTR MaLR 13 335 -214 2288 154 24 11 chr20 10370981 10371363 -56296642 - MLT1B LTR MaLR -3 387 1 281 283 91 0 chr20 10371497 10371596 -56296409 - MIR SINE MIR -6 256 149 1808 111 121 7 chr20 10371666 10371946 -56296059 - AluSx SINE Alu 0 312 1 638 203 49 114 chr20 10372136 10372505 -56295500 - LTR37B LTR ERV1 -2 466 122 752 264 14 28 chr20 10372514 10372726 -56295279 - MER3 DNA MER1_type 0 209 1 938 215 16 5 chr20 10373119 10373305 -56294700 - AluJb SINE Alu -77 235 48 4334 227 97 64 chr20 10373390 10373877 -56294128 - Charlie2a DNA MER1_type -163 2699 2229 1550 191 6 41 chr20 10373877 10374196 -56293809 - AluJb SINE Alu -4 308 1 4334 227 97 64 chr20 10374196 10374423 -56293582 - Charlie2a DNA MER1_type -633 2229 2011 2495 69 0 0 chr20 10374423 10374726 -56293279 - AluY SINE Alu -8 303 1 4334 227 97 64 chr20 10374726 10375213 -56292792 - Charlie2a DNA MER1_type -851 2011 1541 2259 105 0 3 chr20 10375213 10375507 -56292498 + AluSc SINE Alu 1 293 -16 4334 227 97 64 chr20 10375507 10376466 -56291539 - Charlie2a DNA MER1_type -1321 1541 467 411 306 107 28 chr20 10376466 10377112 -56290893 + L1M4 LINE L1 2923 3619 -2527 333 335 86 69 chr20 10377219 10377787 -56290218 - L2 LINE L2 -603 2711 2134 1488 268 30 12 chr20 10377816 10378216 -56289789 + LTR16C LTR ERVL 80 486 -5 879 203 35 1 chr20 10378346 10378564 -56289441 + L1MB2 LINE L1 5923 6153 -45 358 368 15 0 chr20 10378724 10378860 -56289145 + MIR3 SINE MIR 67 204 -4 346 109 0 0 chr20 10379113 10379168 -56288837 + L1MB2 LINE L1 6113 6167 -4 206 348 50 14 chr20 10379184 10379325 -56288680 - L2 LINE L2 -1317 1997 1852 258 167 0 0 chr20 10379535 10379595 -56288410 + GA-rich Low_complexity Low_complexity 1 60 0 231 356 80 15 chr20 10379825 10380272 -56287733 - L2 LINE L2 -262 3010 2528 493 284 33 84 chr20 10380712 10380823 -56287182 - L2 LINE L2 0 3313 3198 383 233 65 88 chr20 10380823 10381038 -56286967 + MER63A DNA MER1_type 1 210 0 493 284 33 84 chr20 10381038 10381260 -56286745 - L2 LINE L2 -115 3198 2997 690 243 58 52 chr20 10381594 10381897 -56286108 + MLT1H LTR MaLR 226 571 -19 1062 211 108 87 chr20 10381897 10382433 -56285572 - MER39 LTR ERV1 -1 706 1 201 154 0 0 chr20 10382504 10382543 -56285462 + (TA)n Simple_repeat Simple_repeat 1 39 0 821 281 74 17 chr20 10383958 10384311 -56283694 + L1ME2 LINE L1 5792 6164 0 6358 158 17 6 chr20 10385247 10386959 -56281046 - L1PB1 LINE L1 -5 6146 4453 201 39 0 0 chr20 10386959 10386985 -56281020 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 6358 158 17 6 chr20 10386985 10387288 -56280717 - L1PB1 LINE L1 -1698 4453 4155 1750 120 6 107 chr20 10387288 10387614 -56280391 + AluSx SINE Alu 4 296 -16 6358 158 17 6 chr20 10387614 10388197 -56279808 - L1PB1 LINE L1 -1996 4155 3524 5093 207 15 3 chr20 10388197 10389348 -56278657 + L1 LINE L1 2403 3567 -2579 1110 170 63 10 chr20 10389549 10389755 -56278250 + MER20 DNA MER1_type 3 219 0 397 263 51 8 chr20 10390628 10390746 -56277259 - MLT1H LTR MaLR -4 545 423 699 227 51 11 chr20 10390844 10391020 -56276985 - MLT1H LTR MaLR -266 283 101 1075 257 33 7 chr20 10391037 10391313 -56276692 - MLT1H LTR MaLR -266 283 1 984 266 71 7 chr20 10391711 10392189 -56275816 - MLT1H LTR MaLR -7 542 12 590 152 0 9 chr20 10392473 10392585 -56275420 + CT-rich Low_complexity Low_complexity 2 112 0 2017 158 15 53 chr20 10392586 10392979 -56275026 - MER57A LTR ERV1 -25 378 1 493 196 9 9 chr20 10392980 10393087 -56274918 - MER57A-int LTR ERV1 -1 7536 7430 848 180 254 29 chr20 10393088 10393399 -56274606 - LTR54B LTR ERV1 -117 381 1 3063 169 47 42 chr20 10393400 10393913 -56274092 - MER57A-int LTR ERV1 -394 7143 6625 1635 178 3 36 chr20 10393913 10394217 -56273788 - AluJb SINE Alu -18 294 1 3063 169 47 42 chr20 10394217 10394320 -56273685 - MER57A-int LTR ERV1 -912 6625 6524 797 225 31 11 chr20 10394344 10394535 -56273470 - L1ME3A LINE L1 -9 6161 5967 2232 108 7 0 chr20 10394537 10394834 -56273171 - AluSx SINE Alu -13 299 1 3183 221 59 20 chr20 10394850 10395300 -56272705 - MER57A-int LTR ERV1 -997 6540 6109 1935 158 81 57 chr20 10395300 10395341 -56272664 - MSTA LTR MaLR 0 428 389 1693 171 40 20 chr20 10395341 10395645 -56272360 + AluJb SINE Alu 1 310 -2 1935 158 81 57 chr20 10395645 10396021 -56271984 - MSTA LTR MaLR -39 389 1 3183 221 59 20 chr20 10396021 10396365 -56271640 - MER57A-int LTR ERV1 -1428 6109 2520 5256 179 20 89 chr20 10396588 10396879 -56271126 - MER57A-int LTR ERV1 -1639 4692 4382 1632 173 7 15 chr20 10396879 10397150 -56270855 + AluJo SINE Alu 3 271 -41 5256 179 20 89 chr20 10397150 10398554 -56269451 - MER57A-int LTR ERV1 -1949 4382 3703 889 207 44 25 chr20 10398547 10399110 -56268895 - MER57A-int LTR ERV1 -1922 2958 1710 * 494 209 0 0 chr20 10399228 10399333 -56268672 - MER57A-int LTR ERV1 -2879 3452 3348 597 78 0 0 chr20 10399383 10399460 -56268545 - MER57A-int LTR ERV1 -2990 3341 3265 763 178 10 87 chr20 10399513 10399721 -56268284 - MER57A-int LTR ERV1 -3059 3272 3081 292 180 86 40 chr20 10399729 10399859 -56268146 - MER57A-int LTR ERV1 -3767 2689 1085 * 429 228 15 21 chr20 10399833 10399962 -56268043 - MER57A-int LTR ERV1 -3681 1980 1094 749 234 98 38 chr20 10399963 10400228 -56267777 - MER34C LTR ERV1 -158 427 147 444 258 23 24 chr20 10400228 10400404 -56267601 - MER57A-int LTR ERV1 -3233 2713 842 3364 188 39 36 chr20 10400436 10401204 -56266801 - MER57A-int LTR ERV1 -6687 850 1 570 170 54 0 chr20 10401204 10401316 -56266689 - MER57A LTR ERV1 0 403 286 555 114 0 0 chr20 10401549 10401628 -56266377 - MADE1 DNA Mariner 0 80 2 25 0 0 0 chr20 10401997 10402022 -56265983 + AT_rich Low_complexity Low_complexity 1 25 0 623 309 121 26 chr20 10402022 10402485 -56265520 + L1M4 LINE L1 4733 5239 -907 1891 118 62 14 chr20 10403065 10403354 -56264651 + AluSx SINE Alu 1 303 -9 1555 183 33 23 chr20 10403493 10403799 -56264206 + AluJo SINE Alu 1 309 -3 266 274 85 102 chr20 10403933 10404343 -56263662 + HAL1b LINE L1 1204 1620 -4501 192 40 0 0 chr20 10404343 10404368 -56263637 + (TG)n Simple_repeat Simple_repeat 2 26 0 266 274 85 102 chr20 10404368 10404523 -56263482 + HAL1b LINE L1 1620 6117 -4 557 258 36 57 chr20 10406311 10406559 -56261446 - L1M4 LINE L1 -368 5798 5560 2837 10 0 0 chr20 10406651 10406960 -56261045 + AluYa5 SINE Alu 1 309 -2 1373 285 72 32 chr20 10407568 10408094 -56259911 - MLT1H LTR MaLR -2 547 1 2491 63 0 0 chr20 10408231 10408532 -56259473 + AluY SINE Alu 1 301 -10 1484 265 90 87 chr20 10408787 10410000 -56258005 - HAL1 LINE L1 -3 2504 1288 574 142 0 54 chr20 10410051 10410199 -56257806 + (TTTC)n Simple_repeat Simple_repeat 4 143 0 1704 266 63 24 chr20 10410200 10410896 -56257109 - HAL1 LINE L1 -1230 1277 555 559 231 46 0 chr20 10410919 10411027 -56256978 + MER81 DNA DNA 2 114 0 729 300 39 16 chr20 10411126 10411383 -56256622 + MER115 DNA AcHobo 188 450 -243 1140 286 48 41 chr20 10411438 10411872 -56256133 - HAL1 LINE L1 -1985 522 82 2135 71 3 0 chr20 10411872 10412154 -56255851 + L1PA7 LINE L1 5865 6147 -7 1140 286 48 41 chr20 10412154 10412236 -56255769 - HAL1 LINE L1 -2425 82 2 281 277 27 54 chr20 10412912 10413024 -56254981 - MIR SINE MIR -118 144 36 315 0 0 0 chr20 10414026 10414061 -56253944 + (TG)n Simple_repeat Simple_repeat 2 36 0 2143 246 115 40 chr20 10414061 10414782 -56253223 - MER21B LTR ERV1 -88 775 1 45 45 0 0 chr20 10414783 10414849 -56253156 + AT_rich Low_complexity Low_complexity 1 66 0 678 293 56 50 chr20 10415159 10415696 -56252309 - L1ME1 LINE L1 -313 5853 5320 1024 316 65 48 chr20 10415699 10416621 -56251384 - L2 LINE L2 -7 3306 2367 2164 123 0 0 chr20 10416729 10417037 -56250968 + AluSx SINE Alu 1 308 -4 897 236 140 71 chr20 10417061 10417498 -56250507 - LTR33 LTR ERVL -52 469 3 319 339 85 15 chr20 10418285 10418415 -56249590 - MIR SINE MIR -118 144 6 270 193 0 0 chr20 10419010 10419067 -56248938 + (CA)n Simple_repeat Simple_repeat 1 57 0 921 281 99 34 chr20 10419347 10419823 -56248182 - LTR33 LTR ERVL -14 507 1 358 239 8 43 chr20 10420833 10420950 -56247055 + (TATATG)n Simple_repeat Simple_repeat 2 114 0 200 303 202 0 chr20 10421055 10421164 -56246841 - L2 LINE L2 0 3272 3142 2126 191 38 16 chr20 10421204 10421655 -56246350 - MER65C LTR ERV1 0 461 1 279 170 19 0 chr20 10421972 10422025 -56245980 + MLT1H LTR MaLR 1 54 -495 1874 188 6 22 chr20 10422042 10422209 -56245796 + MLT1A1 LTR MaLR 8 176 -189 2850 194 82 16 chr20 10422209 10422891 -56245114 - LTR8A LTR ERV1 0 727 1 1874 188 6 22 chr20 10422891 10423085 -56244920 + MLT1A1 LTR MaLR 176 363 -2 1767 240 48 28 chr20 10423085 10423547 -56244458 + MLT1H LTR MaLR 75 545 -4 229 362 64 0 chr20 10423618 10423712 -56244293 + MIR SINE MIR 38 137 -71 2525 148 21 86 chr20 10423844 10424276 -56243729 + L1MB7 LINE L1 5651 6040 -144 2755 7 0 3 chr20 10424276 10424580 -56243425 + AluYa5 SINE Alu 1 303 -8 2525 148 21 86 chr20 10424580 10424706 -56243299 + L1MB7 LINE L1 6040 6173 -11 1950 188 96 32 chr20 10425618 10425916 -56242089 - MLT1D LTR MaLR -2 503 163 261 0 0 0 chr20 10425916 10425945 -56242060 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1950 188 96 32 chr20 10425945 10426113 -56241892 - MLT1D LTR MaLR -342 163 7 2096 145 40 6 chr20 10426124 10426476 -56241529 + THE1B LTR MaLR 1 364 0 826 290 82 21 chr20 10426477 10426942 -56241063 + HAL1b LINE L1 303 795 -553 444 276 22 55 chr20 10427294 10427475 -56240530 + LTR33 LTR ERVL 1 175 -346 367 212 45 0 chr20 10428036 10428102 -56239903 + Tigger2 DNA MER2_type 1 69 -2649 * 2839 148 0 5 chr20 10428092 10428539 -56239466 + Tigger2 DNA MER2_type 2273 2717 -1 727 275 147 46 chr20 10428687 10429033 -56238972 + LTR16A1 LTR ERVL 55 435 -22 2357 130 11 19 chr20 10430318 10430694 -56237311 + THE1C LTR MaLR 3 375 0 1546 179 7 35 chr20 10431209 10431499 -56236506 + AluJo SINE Alu 1 282 -30 540 0 0 0 chr20 10431502 10431562 -56236443 + (TA)n Simple_repeat Simple_repeat 2 61 0 736 270 38 0 chr20 10431667 10431852 -56236153 - MIR SINE MIR -31 231 40 1020 264 79 27 chr20 10432556 10432886 -56235119 - MLT1I LTR MaLR 0 409 63 1278 161 139 15 chr20 10434039 10434306 -56233699 - AluJb SINE Alu -2 300 1 21 0 0 0 chr20 10435154 10435175 -56232830 + AT_rich Low_complexity Low_complexity 1 21 0 1248 173 107 0 chr20 10435673 10435962 -56232043 - MER33 DNA MER1_type -4 320 1 245 256 24 49 chr20 10435995 10436077 -56231928 - HAL1b LINE L1 -433 915 836 539 256 0 30 chr20 10436170 10436334 -56231671 - HAL1b LINE L1 -443 905 747 503 342 103 7 chr20 10436736 10437017 -56230988 - HAL1 LINE L1 -592 1915 1608 2299 91 7 19 chr20 10438804 10439113 -56228892 + AluY SINE Alu 1 305 -6 402 314 155 38 chr20 10440034 10440101 -56227904 - L3 LINE CR1 -15 1562 1504 1226 147 0 82 chr20 10440101 10440346 -56227659 - MER30 DNA MER1_type -4 226 2 402 314 155 38 chr20 10440346 10440517 -56227488 - L3 LINE CR1 -73 1504 1296 3033 37 11 0 chr20 10441261 10441636 -56226369 + L1PA4 LINE L1 5777 6155 0 1231 177 117 38 chr20 10441773 10442090 -56225915 - MER2 DNA MER2_type 0 344 3 204 267 123 48 chr20 10442094 10442240 -56225765 + MIR3 SINE MIR 21 177 -31 2147 120 0 13 chr20 10442296 10442597 -56225408 + AluSg SINE Alu 1 297 -13 4514 159 61 21 chr20 10443439 10444156 -56223849 + L1MB3 LINE L1 5088 5869 -314 2075 97 0 66 chr20 10444156 10444476 -56223529 - AluSc SINE Alu -10 299 1 4514 159 61 21 chr20 10444476 10444805 -56223200 + L1MB3 LINE L1 5869 6183 0 1823 155 0 21 chr20 10444839 10445158 -56222847 - AluJb SINE Alu 0 313 1 23 33 0 0 chr20 10445290 10445320 -56222685 + AT_rich Low_complexity Low_complexity 1 30 0 275 174 47 0 chr20 10445433 10445582 -56222423 + (TA)n Simple_repeat Simple_repeat 1 156 0 472 254 211 7 chr20 10445824 10445966 -56222039 - MER5B DNA MER1_type -7 171 1 2133 163 67 8 chr20 10446043 10446417 -56221588 - MSTD LTR MaLR 0 396 1 349 287 54 83 chr20 10447153 10447491 -56220514 - MLT1I LTR MaLR -182 367 13 6393 141 74 6 chr20 10448079 10449219 -56218786 - Tigger3b DNA MER2_type -1 1230 14 1264 46 0 0 chr20 10449545 10449696 -56218309 + L1PA3 LINE L1 6000 6150 -5 2246 118 0 6 chr20 10450064 10450378 -56217627 + AluSx SINE Alu 1 312 0 1034 215 78 90 chr20 10451095 10451495 -56216510 + MLT1H LTR MaLR 50 444 -105 1135 23 0 0 chr20 10452103 10452233 -56215772 + AluY SINE Alu 172 301 -10 600 261 122 55 chr20 10452660 10453139 -56214866 + L1MB7 LINE L1 2763 3278 -2868 2061 93 0 29 chr20 10453517 10453851 -56214154 + AluY SINE Alu 12 337 0 21 0 0 0 chr20 10454536 10454557 -56213448 + AT_rich Low_complexity Low_complexity 1 21 0 3492 133 11 52 chr20 10454593 10455231 -56212774 - LTR9 LTR ERV1 0 612 1 192 308 77 13 chr20 10455312 10455390 -56212615 + L2 LINE L2 3138 3220 -52 22 35 0 0 chr20 10455425 10455454 -56212551 + AT_rich Low_complexity Low_complexity 1 29 0 287 56 0 0 chr20 10455554 10455590 -56212415 - tRNA-His-CAC tRNA tRNA -39 36 1 24 53 0 0 chr20 10456136 10456174 -56211831 + AT_rich Low_complexity Low_complexity 1 38 0 844 194 127 40 chr20 10457335 10457587 -56210418 - MER74A LTR ERVL -284 274 1 240 344 47 23 chr20 10458943 10459071 -56208934 - LTR16C LTR ERVL -162 329 199 2387 125 13 13 chr20 10459450 10459825 -56208180 + THE1C LTR MaLR 1 375 0 538 262 14 21 chr20 10460080 10460137 -56207868 - LTR16C LTR ERVL -1 490 434 782 176 0 8 chr20 10460137 10460268 -56207737 - FLAM_A SINE Alu 0 133 4 538 262 14 21 chr20 10460268 10460355 -56207650 - LTR16C LTR ERVL -57 434 347 269 167 28 56 chr20 10461300 10461372 -56206633 + MLT1H LTR MaLR 99 168 -381 2046 119 0 7 chr20 10462354 10462661 -56205344 - AluSx SINE Alu 0 305 1 401 304 57 57 chr20 10462767 10463244 -56204761 + L1MB7 LINE L1 3544 4020 -2126 22 70 0 0 chr20 10463399 10463442 -56204563 + AT_rich Low_complexity Low_complexity 1 43 0 531 239 60 60 chr20 10463857 10464024 -56203981 - MIR SINE MIR -94 168 2 228 205 131 41 chr20 10464112 10464234 -56203771 + L1MB7 LINE L1 5299 5431 -860 195 204 0 0 chr20 10464711 10464755 -56203250 + (TATG)n Simple_repeat Simple_repeat 1 44 0 31 68 0 0 chr20 10464847 10464906 -56203099 + AT_rich Low_complexity Low_complexity 1 59 0 654 199 192 0 chr20 10465044 10465195 -56202810 + MER5A DNA MER1_type 9 188 -1 28 0 0 0 chr20 10465273 10465301 -56202704 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 10465436 10465459 -56202546 + AT_rich Low_complexity Low_complexity 1 23 0 908 198 6 0 chr20 10466412 10466584 -56201421 - MER5B DNA MER1_type -2 176 4 669 265 133 62 chr20 10466694 10467181 -56200824 + LTR33A LTR ERVL 2 523 0 238 244 70 58 chr20 10467461 10467547 -56200458 + MER5A DNA MER1_type 5 91 -98 2394 107 24 19 chr20 10467633 10468006 -56199999 - THE1C LTR MaLR 0 375 1 2978 115 78 22 chr20 10468008 10468548 -56199457 - Tigger3(Golem) DNA MER2_type -86 2943 2374 1068 200 35 32 chr20 10468548 10468832 -56199173 + L1MB7 LINE L1 5843 6129 -44 267 278 0 0 chr20 10468834 10468888 -56199117 + Tigger3(Golem) DNA MER2_type 1 54 -2975 376 338 13 26 chr20 10469109 10469260 -56198745 - MIR3 SINE MIR -6 202 54 4003 175 37 19 chr20 10469553 10471047 -56196958 - L1MB8 LINE L1 -309 5869 4358 245 236 18 0 chr20 10471065 10471120 -56196885 + MER5A DNA MER1_type 128 183 -6 377 348 36 0 chr20 10471536 10471674 -56196331 + MIR3 SINE MIR 54 196 -12 678 253 10 26 chr20 10472206 10472400 -56195605 - LTR16A1 LTR ERVL 0 457 267 430 254 73 39 chr20 10472702 10472907 -56195098 - LTR16A1 LTR ERVL -212 245 34 686 95 147 0 chr20 10473099 10473215 -56194790 - AluSq/x SINE Alu -179 133 1 208 289 298 0 chr20 10473394 10473508 -56194497 + L2 LINE L2 2421 2568 -746 331 225 362 7 chr20 10473624 10473762 -56194243 - MLT1H LTR MaLR -97 452 266 1038 279 118 23 chr20 10473829 10474492 -56193513 + L2 LINE L2 2570 3303 -10 1915 89 0 0 chr20 10474629 10474875 -56193130 + AluSg SINE Alu 54 299 -11 248 267 133 9 chr20 10476336 10476441 -56191564 - MLT1L LTR MaLR 0 615 498 350 231 51 161 chr20 10476701 10477130 -56190875 + L1MEc LINE L1 1609 1990 -4731 709 152 4 2 chr20 10477199 10477451 -56190554 + 7SLRNA srpRNA srpRNA 1 299 -21 279 0 0 0 chr20 10477454 10477485 -56190520 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1456 203 159 5 chr20 10477629 10478097 -56189908 - MLT1F LTR MaLR 0 542 1 292 353 0 9 chr20 10478114 10478230 -56189775 - MIR SINE MIR -138 124 10 372 285 26 67 chr20 10478658 10478894 -56189111 + L1MEc LINE L1 2452 2676 -3864 2389 60 0 26 chr20 10479267 10479569 -56188436 + AluY SINE Alu 1 294 -17 414 0 0 0 chr20 10479585 10479631 -56188374 + (CA)n Simple_repeat Simple_repeat 2 47 0 277 265 94 40 chr20 10479714 10480066 -56187939 + L1MEc LINE L1 3242 3620 -2920 682 158 0 63 chr20 10480335 10480462 -56187543 + FRAM SINE Alu 1 118 -58 471 35 0 0 chr20 10480463 10480520 -56187485 + (GA)n Simple_repeat Simple_repeat 2 58 0 189 0 0 0 chr20 10480521 10480542 -56187463 + (GGAA)n Simple_repeat Simple_repeat 2 22 0 21 36 0 0 chr20 10481489 10481517 -56186488 + AT_rich Low_complexity Low_complexity 1 28 0 4285 118 77 88 chr20 10482780 10484217 -56183788 + pTR5 LTR ERV1 61 2438 0 814 306 44 19 chr20 10484363 10484775 -56183230 + L1ME3A LINE L1 5530 5951 -219 226 211 39 0 chr20 10484931 10484983 -56183022 + T-rich Low_complexity Low_complexity 3 56 0 2975 93 9 29 chr20 10485079 10485528 -56182477 - L1PA13 LINE L1 -3 6160 5721 525 131 0 0 chr20 10486156 10486240 -56181765 + (CGGGGG)n Simple_repeat Simple_repeat 3 86 0 314 285 68 109 chr20 10486240 10486580 -56181425 + L1M2 LINE L1 772 1097 -5752 452 306 12 25 chr20 10486799 10486959 -56181046 - MIR SINE MIR -29 233 76 2223 84 0 0 chr20 10487842 10488115 -56179890 + AluSx SINE Alu 1 273 -39 303 269 115 10 chr20 10488134 10488342 -56179663 - L2 LINE L2 -1110 2204 1975 345 266 104 66 chr20 10488418 10488843 -56179162 - MLT1K LTR MaLR -11 577 102 23 86 0 0 chr20 10492288 10492346 -56175659 + AT_rich Low_complexity Low_complexity 1 58 0 24 53 0 0 chr20 10492565 10492603 -56175402 + AT_rich Low_complexity Low_complexity 1 38 0 781 292 128 39 chr20 10492884 10493500 -56174505 - HAL1b LINE L1 -471 877 207 2126 117 0 13 chr20 10494929 10495228 -56172777 - AluSx SINE Alu 0 312 18 22 35 0 0 chr20 10495966 10495995 -56172010 + AT_rich Low_complexity Low_complexity 1 29 0 634 231 19 43 chr20 10496574 10496782 -56171223 + MER3 DNA MER1_type 5 207 -2 1533 138 4 17 chr20 10497271 10497511 -56170494 + AluSx SINE Alu 1 237 -75 21 36 0 0 chr20 10497855 10497883 -56170122 + AT_rich Low_complexity Low_complexity 1 28 0 210 37 0 0 chr20 10499502 10499529 -56168476 + (TG)n Simple_repeat Simple_repeat 2 28 0 1349 139 63 0 chr20 10499559 10499811 -56168194 - L1MA2 LINE L1 0 6304 6037 491 305 52 0 chr20 10502266 10502420 -56165585 + MIR SINE MIR 51 212 -50 21 0 0 0 chr20 10502586 10502607 -56165398 + AT_rich Low_complexity Low_complexity 1 21 0 805 242 132 7 chr20 10503331 10503612 -56164393 - MER5C DNA MER1_type -1 323 8 737 189 0 34 chr20 10507252 10507400 -56160605 - FLAM_C SINE Alu 0 143 1 203 104 0 83 chr20 10507554 10507602 -56160403 + (CCCTAG)n Simple_repeat Simple_repeat 5 48 0 561 62 0 37 chr20 10507613 10507694 -56160311 + MADE1 DNA Mariner 1 78 -2 702 62 26 0 chr20 10507708 10507821 -56160184 + (TAGA)n Simple_repeat Simple_repeat 1 116 0 479 219 12 94 chr20 10507821 10507981 -56160024 - MLT2C1 LTR ERVL -55 342 196 318 211 0 0 chr20 10507986 10508057 -56159948 - L1MC4 LINE L1 -189 7853 7783 841 239 35 5 chr20 10508057 10508258 -56159747 - MLT2C1 LTR ERVL -187 210 4 1721 200 79 103 chr20 10508685 10509169 -56158836 - L1MC4 LINE L1 0 8042 7577 234 0 0 0 chr20 10509169 10509195 -56158810 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1721 200 79 103 chr20 10509195 10509369 -56158636 - L1MC4 LINE L1 -465 7577 7400 1056 84 0 0 chr20 10509390 10509533 -56158472 + Tigger2 DNA MER2_type 304 446 -2272 899 195 56 5 chr20 10509530 10509725 -56158280 + Tigger2 DNA MER2_type 2501 2705 -13 * 1048 223 32 11 chr20 10509727 10510010 -56157995 - L1MC4 LINE L1 -730 7312 7024 424 222 116 111 chr20 10510379 10510586 -56157419 + MER34 LTR ERV1 356 540 -2 498 167 0 0 chr20 10510586 10510670 -56157335 - L1MC4 LINE L1 -1015 7027 6944 209 189 132 0 chr20 10511099 10511152 -56156853 + MER5A DNA MER1_type 1 60 -129 203 267 0 0 chr20 10511355 10511415 -56156590 + T-rich Low_complexity Low_complexity 1 60 0 327 260 190 31 chr20 10511552 10511910 -56156095 - LTR16A1 LTR ERVL -12 445 31 271 321 48 71 chr20 10511946 10512198 -56155807 + MIR SINE MIR 15 260 -2 324 70 0 0 chr20 10512336 10512379 -56155626 + (TG)n Simple_repeat Simple_repeat 2 44 0 1414 118 228 0 chr20 10512390 10512627 -56155378 - AluSx SINE Alu -11 291 1 1149 244 81 50 chr20 10512802 10513245 -56154760 - LTR16A1 LTR ERVL 0 457 1 210 193 18 70 chr20 10514634 10514691 -56153314 - L2 LINE L2 -1 3312 3259 1184 285 56 25 chr20 10514736 10515181 -56152824 + LTR33A LTR ERVL 62 520 -3 270 360 88 9 chr20 10515182 10515296 -56152709 - L2 LINE L2 -37 3235 3113 221 358 32 41 chr20 10515862 10515985 -56152020 - L2 LINE L2 -222 3050 2929 185 269 103 13 chr20 10516112 10516190 -56151815 + L2 LINE L2 1966 2050 -1264 676 329 89 15 chr20 10516381 10516773 -56151232 - MLT1K LTR MaLR -158 430 10 685 172 35 6 chr20 10516794 10516968 -56151037 + GA-rich Low_complexity Low_complexity 2 180 0 257 194 0 16 chr20 10516983 10517045 -56150960 + A-rich Low_complexity Low_complexity 4 64 0 424 337 121 34 chr20 10517090 10517683 -56150322 + L2 LINE L2 2104 2748 -566 357 359 97 38 chr20 10519360 10519650 -56148355 - L2 LINE L2 0 3272 2966 1559 203 98 0 chr20 10519650 10519975 -56148030 - MSTD LTR MaLR 0 396 40 4853 102 24 1 chr20 10519982 10520705 -56147300 + L1MA2 LINE L1 5565 6303 -1 202 301 46 56 chr20 10520765 10520981 -56147024 - L2 LINE L2 -339 2975 2762 386 230 46 0 chr20 10521323 10521410 -56146595 + MIR SINE MIR 58 148 -114 763 257 141 25 chr20 10521417 10521693 -56146312 + MLT1I LTR MaLR 5 312 -97 190 303 9 64 chr20 10521738 10521773 -56146232 + MIR SINE MIR 150 185 -77 2283 113 46 62 chr20 10521773 10522208 -56145797 - MSTA LTR MaLR 0 428 1 190 303 9 64 chr20 10522208 10522281 -56145724 + MIR SINE MIR 185 252 -10 187 302 58 47 chr20 10523755 10523841 -56144164 - L2 LINE L2 -96 3176 3090 308 379 122 9 chr20 10523961 10524304 -56143701 - L2 LINE L2 -365 2949 2568 239 316 0 63 chr20 10525015 10525110 -56142895 + L3 LINE CR1 1383 1471 -106 503 155 19 10 chr20 10526599 10526702 -56141303 + FRAM SINE Alu 71 174 -2 1429 255 59 38 chr20 10526946 10527424 -56140581 + LTR16C LTR ERVL 4 491 0 263 341 49 12 chr20 10528381 10528463 -56139542 + L2 LINE L2 3127 3211 -61 373 267 104 25 chr20 10528472 10528712 -56139293 + LTR16A1 LTR ERVL 199 457 0 529 278 86 29 chr20 10529818 10530027 -56137978 + LTR16C LTR ERVL 35 255 -236 692 106 0 0 chr20 10530027 10530121 -56137884 - LTR12 LTR ERV1 -4 710 617 352 206 56 19 chr20 10530121 10530228 -56137777 - LTR30 LTR ERV1 -70 652 542 886 124 36 148 chr20 10530229 10530479 -56137526 - LTR12 LTR ERV1 -440 274 53 230 289 0 0 chr20 10530479 10530531 -56137474 - LTR30 LTR ERV1 -670 52 1 * 1390 163 40 8 chr20 10530531 10530762 -56137243 + LTR16C LTR ERVL 253 491 0 204 125 0 0 chr20 10531132 10531164 -56136841 + (TAA)n Simple_repeat Simple_repeat 2 33 0 427 169 24 48 chr20 10532142 10532225 -56135780 + MLT1D LTR MaLR 1 81 -424 1103 210 52 3 chr20 10532905 10533215 -56134790 - Charlie5 DNA MER1_type -46 2566 2242 461 176 23 92 chr20 10533222 10533284 -56134721 - MER3 DNA MER1_type -39 123 120 2050 124 0 23 chr20 10533284 10533590 -56134415 + AluSc SINE Alu 1 299 -10 461 176 23 92 chr20 10533590 10533658 -56134347 - MER3 DNA MER1_type -42 120 49 965 304 28 27 chr20 10533997 10534521 -56133484 - MLT1K LTR MaLR -16 572 17 439 293 26 0 chr20 10534687 10534803 -56133202 + MIR SINE MIR 79 197 -65 215 211 39 0 chr20 10534835 10534887 -56133118 - MIR SINE MIR -73 189 136 349 291 184 8 chr20 10535841 10536075 -56131930 + MLT1D LTR MaLR 31 305 -244 259 222 29 69 chr20 10536062 10536192 -56131813 + MLT1F LTR MaLR 275 526 0 * 207 0 0 0 chr20 10536414 10536437 -56131568 + (T)n Simple_repeat Simple_repeat 1 23 0 566 270 91 32 chr20 10536494 10536746 -56131259 + MLT1L LTR MaLR 310 576 -39 225 0 0 0 chr20 10537684 10537709 -56130296 + (A)n Simple_repeat Simple_repeat 1 25 0 1301 269 139 5 chr20 10537762 10538194 -56129811 - LTR16C LTR ERVL -1 490 1 410 239 192 54 chr20 10538425 10538759 -56129246 + L1ME4a LINE L1 5737 6116 -5 402 85 0 0 chr20 10538780 10538839 -56129166 + (TA)n Simple_repeat Simple_repeat 2 60 0 230 255 0 0 chr20 10539013 10539064 -56128941 - L2 LINE L2 0 3313 3263 3802 116 14 0 chr20 10539645 10540195 -56127810 - MER41B LTR ERV1 0 635 78 1166 250 32 18 chr20 10540182 10540462 -56127543 + LTR8 LTR ERV1 408 691 0 * 556 204 129 0 chr20 10542261 10542408 -56125597 + L1M4 LINE L1 4707 4872 -1274 476 179 74 11 chr20 10543022 10543117 -56124888 - MIR SINE MIR -113 149 49 319 217 0 0 chr20 10543195 10543255 -56124750 - MER91B DNA MER1_type -126 64 5 320 274 27 0 chr20 10543329 10543402 -56124603 + MER5A DNA MER1_type 9 83 -106 214 282 221 7 chr20 10543470 10543619 -56124386 - MER5A DNA MER1_type -6 183 3 455 242 21 0 chr20 10543629 10543724 -56124281 - MER5A DNA MER1_type 0 189 93 344 154 0 0 chr20 10543881 10543933 -56124072 - MER5A DNA MER1_type -86 103 52 1313 166 44 9 chr20 10543935 10544164 -56123841 + AluJo SINE Alu 1 237 -75 386 127 0 32 chr20 10544164 10544227 -56123778 - MER5A DNA MER1_type -128 61 1 296 319 238 6 chr20 10544313 10544473 -56123532 - MIR3 SINE MIR -8 200 4 372 154 103 0 chr20 10544929 10545007 -56122998 - MLT1H LTR MaLR 0 549 464 538 251 43 2 chr20 10545009 10545193 -56122812 - MLT1H LTR MaLR -318 231 12 994 289 83 24 chr20 10545209 10545465 -56122540 - LTR16C LTR ERVL -2 489 203 2361 161 43 28 chr20 10545465 10545887 -56122118 + MSTA LTR MaLR 1 428 0 994 289 83 24 chr20 10545887 10546004 -56122001 - LTR16C LTR ERVL -288 203 94 990 102 0 22 chr20 10546836 10546973 -56121032 + AluSq/x SINE Alu 1 134 -179 312 338 75 0 chr20 10547254 10547387 -56120618 + MIR SINE MIR 82 224 -38 2634 148 62 5 chr20 10547846 10548249 -56119756 + L1PB4 LINE L1 4887 5320 -897 210 71 0 0 chr20 10548249 10548277 -56119728 + (CAT)n Simple_repeat Simple_repeat 1 28 0 2634 148 62 5 chr20 10548277 10548442 -56119563 + L1PB4 LINE L1 5320 5474 -743 4216 90 50 20 chr20 10548458 10549057 -56118948 - L1PB1 LINE L1 0 6151 5535 1861 143 4 0 chr20 10549058 10549517 -56118488 - L1PB4 LINE L1 -697 5454 4995 1804 178 53 144 chr20 10549520 10550160 -56117845 + L1PB4 LINE L1 5464 6045 -111 * 3236 117 66 66 chr20 10549800 10550409 -56117596 + L1MA5 LINE L1 5686 6294 -6 386 247 16 73 chr20 10550402 10550588 -56117417 + L1 LINE L1 2960 3156 -2990 * 5052 194 32 26 chr20 10550691 10550795 -56117210 + L1MD1 LINE L1 4901 5003 -1239 2736 110 6 8 chr20 10550795 10551160 -56116845 + THE1B LTR MaLR 1 364 0 5052 194 32 26 chr20 10551160 10551763 -56116242 + L1MD1 LINE L1 5003 5601 -641 2164 99 0 3 chr20 10551763 10552046 -56115959 + AluSg SINE Alu 16 297 -13 5052 194 32 26 chr20 10552046 10552674 -56115331 + L1MD1 LINE L1 5601 6242 0 2293 125 57 142 chr20 10553448 10553921 -56114084 + Tigger2 DNA MER2_type 1 2717 -1 265 307 96 18 chr20 10553972 10554138 -56113867 - MLT1L LTR MaLR -47 541 363 636 247 98 47 chr20 10554201 10554436 -56113569 - MLT1L LTR MaLR -324 291 45 246 290 0 60 chr20 10554665 10554765 -56113240 + MIR SINE MIR 79 172 -90 2281 144 35 3 chr20 10554765 10555132 -56112873 - MLT1B LTR MaLR 0 390 12 1008 265 111 11 chr20 10555407 10555902 -56112103 - MLT1G1 LTR MaLR -2 593 3 370 236 64 93 chr20 10557088 10557228 -56110777 - MIR3 SINE MIR -39 169 34 375 280 145 26 chr20 10557585 10557778 -56110227 + LTR33 LTR ERVL 1 216 -305 358 287 0 25 chr20 10557795 10557917 -56110088 + MLT1H LTR MaLR 431 549 0 393 58 0 0 chr20 10558440 10558492 -56109513 + (GA)n Simple_repeat Simple_repeat 1 52 0 555 276 73 60 chr20 10558971 10559322 -56108683 + L1MEc LINE L1 2177 2490 -3725 2359 76 7 0 chr20 10559324 10559625 -56108380 + AluY SINE Alu 1 303 -8 370 323 24 31 chr20 10559804 10559931 -56108074 - MIR SINE MIR -63 145 20 737 252 142 21 chr20 10560176 10560458 -56107547 + LTR16A1 LTR ERVL 131 446 -11 1973 72 16 0 chr20 10560521 10560770 -56107235 + L1PA13 LINE L1 5892 6144 -19 191 324 29 29 chr20 10561537 10561605 -56106400 - MIR SINE MIR -65 143 76 1081 235 100 59 chr20 10561978 10562417 -56105588 - LTR16A1 LTR ERVL 0 457 1 2300 89 0 0 chr20 10564203 10564531 -56103474 - AluSc SINE Alu 0 328 1 1017 236 87 46 chr20 10564545 10565061 -56102944 + MLT1G LTR MaLR 10 595 0 699 326 61 28 chr20 10565456 10565852 -56102153 + MLT1K LTR MaLR 124 532 -56 414 0 0 0 chr20 10566067 10566113 -56101892 + (ATG)n Simple_repeat Simple_repeat 2 47 0 771 249 30 0 chr20 10566124 10566334 -56101671 - MIR SINE MIR -21 241 23 23 33 0 0 chr20 10567600 10567630 -56100375 + AT_rich Low_complexity Low_complexity 1 30 0 2219 121 3 0 chr20 10567733 10568030 -56099975 - AluSc SINE Alu -11 298 1 501 17 0 0 chr20 10568072 10568130 -56099875 + (TTTC)n Simple_repeat Simple_repeat 3 60 0 2417 115 0 64 chr20 10568134 10568332 -56099673 - L1PB1 LINE L1 -3 6148 5986 2102 136 0 3 chr20 10568332 10568634 -56099371 - AluSx SINE Alu -11 301 1 2417 115 0 64 chr20 10568634 10568827 -56099178 - L1PB1 LINE L1 -165 5986 5782 761 53 86 5 chr20 10568853 10569420 -56098585 + (TA)n Simple_repeat Simple_repeat 1 612 0 2336 95 3 3 chr20 10569428 10569734 -56098271 - AluSq SINE Alu -7 306 1 202 28 28 28 chr20 10569736 10569772 -56098233 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1988 134 0 7 chr20 10569778 10570061 -56097944 - AluSq SINE Alu -32 281 1 269 109 65 0 chr20 10570061 10570107 -56097898 - L1PB1 LINE L1 -366 5785 5737 1803 203 38 51 chr20 10570170 10570718 -56097287 + L1MB8 LINE L1 3893 4433 -1713 1077 211 46 90 chr20 10570724 10571112 -56096893 + MLT2D LTR ERVL 1 371 -43 258 136 0 0 chr20 10571129 10571173 -56096832 + (TA)n Simple_repeat Simple_repeat 1 44 0 3643 202 63 59 chr20 10571214 10572305 -56095700 + L1MB8 LINE L1 4462 5547 -631 372 22 0 0 chr20 10572305 10572350 -56095655 + (TG)n Simple_repeat Simple_repeat 2 46 0 813 112 0 0 chr20 10572351 10572458 -56095547 - AluSg/x SINE Alu -27 283 177 3643 202 63 59 chr20 10572458 10572953 -56095052 + L1MB8 LINE L1 5546 6172 -6 268 139 70 26 chr20 10572963 10573078 -56094927 + (TA)n Simple_repeat Simple_repeat 1 120 0 296 229 180 8 chr20 10573340 10573462 -56094543 + MIR SINE MIR 4 146 -116 6843 93 8 10 chr20 10573532 10574439 -56093566 + L1PA10 LINE L1 5200 6107 -61 2497 120 19 25 chr20 10574439 10574805 -56093200 - THE1B LTR MaLR 0 364 1 12802 88 2 0 chr20 10574805 10576380 -56091625 - THE1B-int LTR MaLR 0 1580 2 2348 139 22 27 chr20 10576381 10576747 -56091258 - THE1B LTR MaLR 0 364 1 6843 93 8 10 chr20 10576747 10576796 -56091209 + L1PA10 LINE L1 6105 6157 -11 24 67 0 0 chr20 10576796 10576841 -56091164 + AT_rich Low_complexity Low_complexity 1 45 0 914 129 7 7 chr20 10577496 10577636 -56090369 - THE1-int LTR MaLR -544 1036 897 962 181 6 0 chr20 10578002 10578168 -56089837 + MER5A DNA MER1_type 4 170 -19 371 290 82 48 chr20 10578282 10578513 -56089492 - MLT1J LTR MaLR -50 461 223 1971 152 0 7 chr20 10578673 10578983 -56089022 + AluJb SINE Alu 1 308 -4 475 223 198 13 chr20 10579659 10579816 -56088189 + MER5A DNA MER1_type 4 189 0 932 231 11 0 chr20 10579824 10580006 -56087999 + MER5A DNA MER1_type 1 184 -5 200 297 16 0 chr20 10580017 10580081 -56087924 - MER5B DNA MER1_type 0 178 114 1048 281 76 43 chr20 10580470 10580983 -56087022 + MLT1H LTR MaLR 2 531 -18 1506 235 100 56 chr20 10581455 10581494 -56086511 - L1ME3 LINE L1 0 6170 6134 2017 146 13 7 chr20 10581494 10581803 -56086202 + AluJo SINE Alu 1 311 -1 1506 235 100 56 chr20 10581803 10582261 -56085744 - L1ME3 LINE L1 -36 6134 5651 514 238 189 0 chr20 10582662 10582805 -56085200 + MER5A DNA MER1_type 14 183 -6 259 288 23 61 chr20 10582807 10582939 -56085066 - MIR SINE MIR -60 202 76 238 293 0 0 chr20 10584873 10584931 -56083074 - L2 LINE L2 0 3272 3215 387 224 72 32 chr20 10584963 10585088 -56082917 - L2 LINE L2 0 3313 3184 372 247 209 10 chr20 10585134 10585277 -56082728 + MER5A DNA MER1_type 13 189 0 441 296 239 9 chr20 10586844 10587178 -56080827 + L3 LINE CR1 1152 1562 -15 274 250 0 0 chr20 10587227 10587291 -56080714 - MIR SINE MIR -53 209 146 572 274 112 53 chr20 10587298 10587655 -56080350 + L2 LINE L2 2936 3313 0 379 243 65 9 chr20 10587662 10587769 -56080236 - MIR SINE MIR -122 140 28 2378 129 28 3 chr20 10587778 10588135 -56079870 + MER47A DNA MER2_type 1 366 0 199 320 90 0 chr20 10588755 10588833 -56079172 + MIR SINE MIR 107 191 -71 210 234 43 0 chr20 10589888 10589935 -56078070 + L2 LINE L2 3264 3312 -1 1191 187 34 5 chr20 10590266 10590475 -56077530 - MER20 DNA MER1_type -2 217 3 231 235 78 0 chr20 10590698 10590749 -56077256 - MLT1H LTR MaLR -12 537 483 214 335 174 29 chr20 10592145 10592831 -56075174 + L2 LINE L2 1893 2677 -637 824 192 0 0 chr20 10592889 10593019 -56074986 - FLAM_A SINE Alu -3 130 1 794 256 93 83 chr20 10593120 10593282 -56074723 - L2 LINE L2 -1 3312 3153 576 111 0 12 chr20 10593282 10593363 -56074642 - MADE1 DNA Mariner 0 80 1 794 256 93 83 chr20 10593363 10593660 -56074345 - L2 LINE L2 -160 3153 2848 344 257 26 79 chr20 10593810 10593962 -56074043 - MLT1H LTR MaLR 0 549 406 339 261 17 35 chr20 10594088 10594203 -56073802 - MLT1H LTR MaLR -386 163 51 209 251 230 68 chr20 10594783 10594974 -56073031 - L2 LINE L2 -5 3308 3087 456 193 0 35 chr20 10595685 10595799 -56072206 - MER113 DNA MER1_type? -298 223 114 338 203 83 68 chr20 10596108 10596241 -56071764 + LTR33A LTR ERVL 360 494 -29 198 71 0 0 chr20 10596938 10596966 -56071039 + (A)n Simple_repeat Simple_repeat 1 28 0 1545 258 46 71 chr20 10597141 10597733 -56070272 + MLT1K LTR MaLR 11 587 -1 259 235 0 0 chr20 10597858 10597909 -56070096 - L2 LINE L2 -4 3309 3259 345 209 48 48 chr20 10598181 10598286 -56069719 + MIR3 SINE MIR 89 193 -15 492 319 135 18 chr20 10598429 10598595 -56069410 + L2 LINE L2 2639 2784 -529 2629 134 65 0 chr20 10598595 10598997 -56069008 + MSTA LTR MaLR 1 428 0 492 319 135 18 chr20 10598997 10599311 -56068694 + L2 LINE L2 2784 3168 -145 210 189 0 19 chr20 10599315 10599368 -56068637 + (TTTAA)n Simple_repeat Simple_repeat 2 53 0 1762 223 52 38 chr20 10600100 10600597 -56067408 + L1ME3A LINE L1 5662 6165 -5 357 24 0 0 chr20 10600884 10600926 -56067079 + (CA)n Simple_repeat Simple_repeat 2 43 0 201 74 0 0 chr20 10600926 10600953 -56067052 + (TG)n Simple_repeat Simple_repeat 1 27 0 221 146 21 0 chr20 10600959 10601007 -56066998 + (TA)n Simple_repeat Simple_repeat 1 49 0 22 56 0 0 chr20 10601273 10601309 -56066696 + AT_rich Low_complexity Low_complexity 1 36 0 721 177 4 24 chr20 10601392 10601652 -56066353 + (TATATG)n Simple_repeat Simple_repeat 1 254 0 2250 173 25 67 chr20 10601685 10602130 -56065875 - MSTB LTR MaLR 0 426 1 2775 97 3 18 chr20 10602549 10602930 -56065075 - L1PB1 LINE L1 -1 6150 5776 291 28 0 0 chr20 10602936 10602972 -56065033 + (CA)n Simple_repeat Simple_repeat 2 37 0 1190 77 6 0 chr20 10602972 10603128 -56064877 - L1PB1 LINE L1 -361 5790 5634 363 44 0 0 chr20 10603310 10603355 -56064650 + (TG)n Simple_repeat Simple_repeat 1 45 0 267 31 0 0 chr20 10603357 10603389 -56064616 + (GA)n Simple_repeat Simple_repeat 2 33 0 201 139 0 0 chr20 10603587 10603630 -56064375 + (A)n Simple_repeat Simple_repeat 1 43 0 267 293 42 73 chr20 10603830 10604004 -56064001 + MIR3 SINE MIR 31 195 -13 191 243 143 43 chr20 10604532 10604602 -56063403 - L2 LINE L2 -40 3273 3197 574 299 77 62 chr20 10604650 10604740 -56063265 + L2 LINE L2 2817 2904 -409 1880 130 22 4 chr20 10604740 10605117 -56062888 + AluSc SINE Alu 1 382 0 574 299 77 62 chr20 10605117 10605507 -56062498 + L2 LINE L2 2904 3305 -8 242 359 55 0 chr20 10605699 10605827 -56062178 - L2 LINE L2 -212 3060 2926 22 56 0 0 chr20 10606123 10606159 -56061846 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr20 10607366 10607388 -56060617 + AT_rich Low_complexity Low_complexity 1 22 0 542 319 27 51 chr20 10607508 10607664 -56060341 + MIR SINE MIR 12 161 -101 3861 135 17 5 chr20 10607664 10608241 -56059764 - L1PA16 LINE L1 -3 6163 5580 542 319 27 51 chr20 10608241 10608341 -56059664 + MIR SINE MIR 161 262 0 407 331 45 7 chr20 10608556 10608710 -56059295 + MIR3 SINE MIR 42 201 -7 456 336 57 38 chr20 10609489 10609807 -56058198 + MLT1K LTR MaLR 187 510 -78 836 289 128 4 chr20 10610013 10610286 -56057719 + LTR16C LTR ERVL 144 450 -41 37181 91 11 15 chr20 10610352 10614596 -56053409 + L1PA6 LINE L1 11 4223 -1931 2570 57 0 16 chr20 10614596 10614912 -56053093 + AluY SINE Alu 1 311 0 37181 91 11 15 chr20 10614912 10616834 -56051171 + L1PA6 LINE L1 4223 6151 -3 1993 112 22 4 chr20 10617668 10617944 -56050061 + AluSp SINE Alu 14 294 -19 565 319 43 0 chr20 10617962 10618125 -56049880 - MIR3 SINE MIR -18 190 21 317 267 52 35 chr20 10619242 10619358 -56048647 - MIR SINE MIR -109 153 36 372 208 144 32 chr20 10619859 10619984 -56048021 + MLT1H LTR MaLR 411 549 0 188 361 160 14 chr20 10621243 10621387 -56046618 - MIR SINE MIR -50 212 48 222 314 4 0 chr20 10622027 10622099 -56045906 + MIR SINE MIR 31 103 -105 821 256 222 6 chr20 10622147 10622632 -56045373 - L2 LINE L2 -51 3262 2666 22 0 0 0 chr20 10623516 10623538 -56044467 + GC_rich Low_complexity Low_complexity 1 22 0 250 290 22 87 chr20 10623851 10623989 -56044016 + L2 LINE L2 3165 3293 -20 228 208 111 28 chr20 10624376 10624448 -56043557 - MIR3 SINE MIR -22 186 109 404 232 205 26 chr20 10625388 10625539 -56042466 + MER5B DNA MER1_type 1 178 0 1003 303 98 35 chr20 10625544 10626062 -56041943 + MLT1K LTR MaLR 2 552 -36 1150 236 206 10 chr20 10626662 10627013 -56040992 - MLT1H LTR MaLR -14 535 96 2243 110 0 0 chr20 10627013 10627313 -56040692 - AluSx SINE Alu -12 300 1 1150 236 206 10 chr20 10627313 10627360 -56040645 - MLT1H LTR MaLR -453 96 59 259 164 164 27 chr20 10627369 10627442 -56040563 - MIR3 SINE MIR -35 173 91 1601 252 24 14 chr20 10628517 10628930 -56039075 - L1MC3 LINE L1 -174 7611 7195 246 274 0 0 chr20 10628933 10628995 -56039010 - MLT1F1 LTR MaLR -442 125 64 376 265 0 100 chr20 10631303 10631473 -56036532 - MLT1H LTR MaLR -394 155 3 659 270 69 13 chr20 10632166 10632399 -56035606 - MLT1L LTR MaLR 0 615 370 969 162 17 0 chr20 10632408 10632581 -56035424 - Tigger7 DNA MER2_type 0 2487 2312 625 200 20 38 chr20 10632570 10632814 -56035191 - Tigger7 DNA MER2_type -2171 316 1 * 271 207 0 35 chr20 10632973 10633031 -56034974 - MLT1L LTR MaLR -415 200 145 840 153 0 0 chr20 10633638 10633756 -56034249 + FLAM_C SINE Alu 1 118 -15 987 206 19 29 chr20 10633786 10633995 -56034010 + AluJo SINE Alu 90 296 -16 525 254 51 61 chr20 10634103 10634300 -56033705 + L2 LINE L2 3119 3313 0 263 304 65 11 chr20 10634432 10634524 -56033481 - MIR SINE MIR -92 116 20 1615 233 75 18 chr20 10635329 10635771 -56032234 - MLT1C LTR MaLR 0 467 1 227 350 0 3 chr20 10635774 10635865 -56032140 - MIR SINE MIR -65 143 69 823 254 132 55 chr20 10635911 10636329 -56031676 + MLT1H LTR MaLR 100 549 0 883 236 107 42 chr20 10637007 10637316 -56030689 - MLT1H LTR MaLR -5 544 216 1870 168 10 3 chr20 10638331 10638640 -56029365 + AluJo SINE Alu 1 311 -1 1580 269 57 33 chr20 10638966 10639457 -56028548 - MLT1J LTR MaLR 0 511 9 2186 110 6 22 chr20 10639567 10639884 -56028121 + AluSx SINE Alu 1 312 0 230 280 40 13 chr20 10640372 10640447 -56027558 + MIR SINE MIR 109 185 -77 684 160 21 35 chr20 10640569 10640713 -56027292 + MER3 DNA MER1_type 28 122 -87 1618 202 29 18 chr20 10640721 10641107 -56026898 + MER3 DNA MER1_type 2234 2623 0 256 306 36 66 chr20 10641243 10641439 -56026566 - L2 LINE L2 -133 3180 2991 233 288 32 56 chr20 10641453 10641578 -56026427 - MIR SINE MIR -128 134 13 484 303 212 39 chr20 10642526 10642818 -56025187 + L2 LINE L2 2236 2604 -710 273 29 0 0 chr20 10642818 10642852 -56025153 + (TTAGGG)n Simple_repeat Simple_repeat 5 38 0 484 303 212 39 chr20 10642852 10642922 -56025083 + L2 LINE L2 2604 2661 -653 518 167 25 25 chr20 10642925 10643041 -56024964 - MLT1G LTR MaLR -434 121 6 307 294 13 33 chr20 10643273 10643416 -56024589 + MIR SINE MIR 57 197 -11 26 50 0 0 chr20 10643949 10643989 -56024016 + AT_rich Low_complexity Low_complexity 1 40 0 408 274 0 0 chr20 10644210 10644316 -56023689 - L1ME3A LINE L1 0 6170 6065 367 328 25 25 chr20 10644606 10644810 -56023195 + L2 LINE L2 2037 2240 -1074 1375 268 112 12 chr20 10644854 10645335 -56022670 + MLT1H LTR MaLR 21 549 0 1053 330 47 48 chr20 10645354 10645943 -56022062 + L2 LINE L2 2275 2871 -442 1915 156 0 16 chr20 10645943 10646250 -56021755 - AluSx SINE Alu -10 302 1 1053 330 47 48 chr20 10646250 10646693 -56021312 + L2 LINE L2 2871 3313 0 256 269 26 0 chr20 10646683 10646761 -56021244 - MIR SINE MIR -65 197 118 * 512 306 119 38 chr20 10647005 10647348 -56020657 - MLT1L LTR MaLR -244 371 1 405 258 10 10 chr20 10647850 10647947 -56020058 + MIR SINE MIR 17 113 -95 848 230 157 54 chr20 10648012 10648343 -56019662 - MLT1J2 LTR MaLR 0 450 76 1880 161 3 20 chr20 10648343 10648647 -56019358 + AluJb SINE Alu 1 299 -13 848 230 157 54 chr20 10648647 10648684 -56019321 - MLT1J2 LTR MaLR -374 76 44 926 158 0 0 chr20 10648739 10648872 -56019133 - FLAM_C SINE Alu 0 133 1 304 346 44 37 chr20 10648973 10649109 -56018896 + L2 LINE L2 3097 3233 -39 1087 204 10 0 chr20 10649894 10650095 -56017910 - MER3 DNA MER1_type -2 207 5 774 314 79 16 chr20 10650709 10651088 -56016917 + MLT1I LTR MaLR 6 408 -1 2342 103 0 0 chr20 10651235 10651537 -56016468 + AluSx SINE Alu 1 302 -10 185 180 20 0 chr20 10651879 10651929 -56016076 + GA-rich Low_complexity Low_complexity 2 52 0 21 0 0 0 chr20 10652076 10652097 -56015908 + AT_rich Low_complexity Low_complexity 1 21 0 301 288 72 24 chr20 10652208 10652333 -56015672 + MIR SINE MIR 53 183 -79 340 196 137 20 chr20 10652558 10652660 -56015345 - MIR SINE MIR -73 189 76 270 279 108 16 chr20 10652696 10652825 -56015180 - MLT1H LTR MaLR -27 522 382 555 244 17 17 chr20 10653215 10653334 -56014671 + MER5A DNA MER1_type 11 129 -60 792 272 78 23 chr20 10653497 10653924 -56014081 + MLT1K LTR MaLR 10 579 -9 2294 112 0 0 chr20 10654427 10654739 -56013266 + AluSq SINE Alu 1 312 -1 244 293 30 20 chr20 10654794 10654893 -56013112 - MIR SINE MIR -119 143 44 571 234 153 10 chr20 10654929 10655138 -56012867 + MIR SINE MIR 22 260 -2 190 140 18 88 chr20 10655278 10655335 -56012670 - MER5C DNA MER1_type -189 135 83 1243 197 10 69 chr20 10655544 10655834 -56012171 - AluJb SINE Alu -39 273 1 293 271 43 0 chr20 10655850 10655920 -56012085 + MER5B DNA MER1_type 52 124 -54 4698 181 23 18 chr20 10655920 10657000 -56011005 - L1MB3 LINE L1 -1 6182 5101 2856 196 50 22 chr20 10656992 10658148 -56009857 - L1M4 LINE L1 -439 5745 4564 * 1380 224 38 8 chr20 10658148 10658514 -56009491 - L1MB3 LINE L1 -1154 4992 4616 754 186 0 0 chr20 10658538 10658680 -56009325 - FLAM_A SINE Alu 0 147 6 2873 227 56 25 chr20 10658706 10660038 -56007967 - L1M4c LINE L1 -4357 2468 949 313 203 102 34 chr20 10660035 10660153 -56007852 - L1MB3 LINE L1 -3760 2386 2261 * 3781 222 41 46 chr20 10660159 10660767 -56007238 - L1M4c LINE L1 -5576 966 398 978 159 0 6 chr20 10660767 10660924 -56007081 - L1PA15 LINE L1 0 6165 6010 3781 222 41 46 chr20 10660924 10661305 -56006700 - L1M4c LINE L1 -6144 398 17 246 223 78 84 chr20 10661671 10661837 -56006168 - HAL1 LINE L1 -90 2417 2253 605 280 15 38 chr20 10662731 10662995 -56005010 - HAL1 LINE L1 -821 1686 1429 412 263 183 23 chr20 10662991 10663292 -56004713 + HAL1 LINE L1 2049 2397 -110 * 1813 299 122 13 chr20 10663311 10664309 -56003696 - L2 LINE L2 -150 3163 2055 301 358 12 43 chr20 10664408 10664570 -56003435 - L2 LINE L2 -968 2346 2190 206 308 0 13 chr20 10664768 10664846 -56003159 + MIR SINE MIR 136 212 -50 368 257 147 0 chr20 10665838 10665947 -56002058 + MIR SINE MIR 5 129 -133 190 226 151 38 chr20 10665958 10666011 -56001994 + L2 LINE L2 3214 3272 0 272 318 0 0 chr20 10666206 10666291 -56001714 - MIR SINE MIR -80 182 98 360 0 0 0 chr20 10668594 10668634 -55999371 + (TG)n Simple_repeat Simple_repeat 1 40 0 207 0 0 0 chr20 10669711 10669734 -55998271 + (TGGGGG)n Simple_repeat Simple_repeat 2 24 0 324 188 0 0 chr20 10669791 10669855 -55998150 + (CA)n Simple_repeat Simple_repeat 2 65 0 225 113 38 75 chr20 10670014 10670067 -55997938 + C-rich Low_complexity Low_complexity 3 53 0 626 254 107 17 chr20 10675275 10675452 -55992553 - MIR SINE MIR -39 223 31 315 0 0 0 chr20 10675540 10675575 -55992430 + (T)n Simple_repeat Simple_repeat 1 35 0 291 296 11 108 chr20 10675610 10675786 -55992219 + MIR3 SINE MIR 22 180 -28 308 290 19 37 chr20 10677710 10677817 -55990188 - L2 LINE L2 0 3313 3209 247 397 64 19 chr20 10678522 10678678 -55989327 + L2 LINE L2 3107 3269 -3 433 259 63 60 chr20 10679824 10680016 -55987989 + MIR SINE MIR 24 213 -49 199 262 0 0 chr20 10680923 10680965 -55987040 - L2 LINE L2 -18 3295 3254 992 149 58 0 chr20 10681760 10681934 -55986071 + MER5A DNA MER1_type 6 189 0 1372 159 0 0 chr20 10682983 10683191 -55984814 + MER46A DNA MER2_type 28 235 -1 247 308 42 42 chr20 10683312 10683432 -55984573 - MLT1K LTR MaLR -91 497 378 553 262 198 16 chr20 10683890 10684142 -55983863 - L2 LINE L2 -4 3309 3012 21 0 0 0 chr20 10685458 10685479 -55982526 + AT_rich Low_complexity Low_complexity 1 21 0 260 294 43 80 chr20 10685495 10685659 -55982346 - MIR SINE MIR -27 181 16 229 271 19 65 chr20 10685755 10685862 -55982143 + MER102a DNA MER1_type 221 322 -8 1289 173 19 71 chr20 10686075 10686156 -55981849 - Charlie4a DNA MER1_type -1469 492 408 273 29 0 0 chr20 10686156 10686190 -55981815 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 1512 178 6 116 chr20 10686199 10686536 -55981469 + AluJo SINE Alu 2 301 -1 1289 173 19 71 chr20 10686536 10686768 -55981237 - Charlie4a DNA MER1_type -1561 400 186 442 250 194 77 chr20 10686879 10687271 -55980734 - MLT1H LTR MaLR -5 544 107 354 23 0 0 chr20 10688236 10688279 -55979726 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1107 268 80 48 chr20 10688306 10688780 -55979225 - LTR16C LTR ERVL 0 491 3 635 308 72 0 chr20 10688892 10689113 -55978892 - MIR SINE MIR -12 250 14 2111 104 18 0 chr20 10689910 10690220 -55977785 + AluSx SINE Alu 1 315 0 201 225 135 22 chr20 10690610 10690699 -55977306 - L2 LINE L2 -163 3150 3052 361 299 22 15 chr20 10690859 10690993 -55977012 - MIR SINE MIR -36 226 92 2030 238 65 48 chr20 10691196 10691826 -55976179 - MLT1E1 LTR MaLR 0 654 14 646 325 130 12 chr20 10692665 10693213 -55974792 - L2 LINE L2 -7 3306 2686 828 239 66 66 chr20 10693449 10693843 -55974162 - LTR16A1 LTR ERVL -63 394 1 517 217 9 9 chr20 10694388 10694494 -55973511 + MER5B DNA MER1_type 1 106 -72 2768 216 46 27 chr20 10694496 10695127 -55972878 - L1MD3 LINE L1 0 7995 7353 414 269 120 42 chr20 10695256 10695472 -55972533 + MIR SINE MIR 28 260 -2 1061 260 29 4 chr20 10695644 10695890 -55972115 - MIR SINE MIR -10 252 1 2322 115 0 0 chr20 10696001 10696313 -55971692 - AluSx SINE Alu 0 312 1 229 313 38 0 chr20 10697521 10697601 -55970404 + (CGTG)n Simple_repeat Simple_repeat 3 85 0 226 175 25 0 chr20 10698111 10698151 -55969854 - MIR SINE MIR -9 253 213 183 295 116 11 chr20 10698187 10698282 -55969723 + MIR3 SINE MIR 85 189 -19 624 211 22 56 chr20 10699082 10699354 -55968651 - MLT1H LTR MaLR -4 590 230 309 185 87 0 chr20 10699627 10699719 -55968286 - L1ME4a LINE L1 -1 6120 6021 21 36 0 0 chr20 10699730 10699758 -55968247 + AT_rich Low_complexity Low_complexity 1 28 0 714 231 140 32 chr20 10699811 10700032 -55967973 - MIR SINE MIR -12 250 6 779 251 50 0 chr20 10700043 10700222 -55967783 - MER5A DNA MER1_type 0 189 2 307 276 48 9 chr20 10700226 10700331 -55967674 - MIR SINE MIR -82 180 72 652 207 64 7 chr20 10700921 10701061 -55966944 + MER5A DNA MER1_type 14 161 -28 907 218 11 0 chr20 10701181 10701355 -55966650 - MER5A DNA MER1_type -6 183 8 2272 137 39 0 chr20 10702007 10702342 -55965663 + MER7A DNA MER2_type 1 346 0 799 255 42 8 chr20 10703434 10703693 -55964312 - LTR37B LTR ERV1 -3 465 198 580 235 31 56 chr20 10703737 10703787 -55964218 - LTR37B LTR ERV1 -272 196 146 614 209 33 0 chr20 10703787 10703940 -55964065 + L1MA10 LINE L1 6177 6334 0 580 235 31 56 chr20 10703940 10704085 -55963920 - LTR37B LTR ERV1 -322 146 6 629 247 16 47 chr20 10704133 10704323 -55963682 + MIR SINE MIR 69 252 -10 704 246 27 16 chr20 10704652 10704835 -55963170 + MIR SINE MIR 42 226 -36 710 291 65 12 chr20 10705486 10705794 -55962211 + LTR16A1 LTR ERVL 153 455 -2 189 74 0 0 chr20 10706729 10706756 -55961249 + (CA)n Simple_repeat Simple_repeat 2 28 0 642 246 62 124 chr20 10707834 10708286 -55959719 + L1ME4a LINE L1 5543 5966 -155 819 190 29 23 chr20 10708298 10708472 -55959533 - MER5B DNA MER1_type 0 178 4 2144 121 0 38 chr20 10708573 10708716 -55959289 + AluSx SINE Alu 3 150 -162 2394 70 17 0 chr20 10708716 10709017 -55958988 + AluSp SINE Alu 1 306 -7 2144 121 0 38 chr20 10709017 10709187 -55958818 + AluSx SINE Alu 150 304 -8 1500 167 124 70 chr20 10709257 10709683 -55958322 + LTR37B LTR ERV1 6 454 -14 1774 185 7 0 chr20 10710811 10711119 -55956886 - AluJo SINE Alu -2 310 1 359 303 124 22 chr20 10711187 10711372 -55956633 - L3 LINE CR1 -1 1576 1373 440 225 8 67 chr20 10711746 10711866 -55956139 + MER5A DNA MER1_type 2 114 -75 444 19 0 0 chr20 10711971 10712024 -55955981 + (CA)n Simple_repeat Simple_repeat 2 54 0 272 287 89 0 chr20 10712410 10712511 -55955494 - L3 LINE CR1 -335 1242 1133 197 266 174 37 chr20 10713623 10713732 -55954273 + MIR3 SINE MIR 82 205 -3 930 227 22 64 chr20 10713900 10714213 -55953792 - LTR16A1 LTR ERVL 0 457 158 2555 58 0 3 chr20 10714292 10714601 -55953404 - AluY SINE Alu -3 308 1 216 197 105 53 chr20 10715067 10715143 -55952862 + L2 LINE L2 3192 3271 -1 238 243 97 19 chr20 10716056 10716159 -55951846 - MER5A DNA MER1_type -24 165 55 196 286 124 57 chr20 10716077 10716182 -55951823 + MER5A DNA MER1_type 56 167 -22 * 643 62 0 0 chr20 10716201 10716281 -55951724 - Alu SINE Alu -9 300 221 363 200 200 0 chr20 10717160 10717245 -55950760 - MER5A DNA MER1_type -84 105 4 544 320 88 41 chr20 10717968 10718674 -55949331 + L1M4 LINE L1 2401 3139 -3007 2099 101 4 0 chr20 10718823 10719132 -55948873 - AluSc SINE Alu 0 310 1 359 289 27 27 chr20 10719266 10719415 -55948590 + MIR SINE MIR 113 261 -1 1894 132 30 7 chr20 10720411 10720707 -55947298 + AluSx SINE Alu 1 303 -9 1607 189 68 12 chr20 10720882 10721204 -55946801 - MER58B DNA MER1_type -1 340 1 2333 89 3 3 chr20 10721254 10721558 -55946447 + AluSp SINE Alu 1 304 -9 689 245 15 51 chr20 10721625 10721699 -55946306 + MER5A DNA MER1_type 1 76 -113 2197 118 3 3 chr20 10721699 10722005 -55946000 + AluSx SINE Alu 1 306 -6 689 245 15 51 chr20 10722005 10722126 -55945879 + MER5A DNA MER1_type 76 189 0 209 278 0 56 chr20 10722193 10722265 -55945740 - L2 LINE L2 -1 3271 3204 284 48 24 0 chr20 10723000 10723042 -55944963 + (GA)n Simple_repeat Simple_repeat 1 43 0 386 308 107 0 chr20 10723530 10723689 -55944316 - MIR SINE MIR -73 189 14 334 308 72 14 chr20 10724653 10724818 -55943187 - MLT1J1 LTR MaLR -2 444 276 647 216 40 0 chr20 10725305 10725430 -55942575 + L2 LINE L2 3141 3270 -2 1269 230 8 59 chr20 10725656 10725844 -55942161 + L1ME2 LINE L1 5789 5948 -216 2580 60 0 0 chr20 10725844 10726145 -55941860 + AluY SINE Alu 1 301 -10 1269 230 8 59 chr20 10726145 10726343 -55941662 + L1ME2 LINE L1 5948 6155 -9 405 0 0 0 chr20 10726352 10726397 -55941608 + (TAAA)n Simple_repeat Simple_repeat 1 45 0 1664 176 47 3 chr20 10727130 10727449 -55940556 - MER63C DNA MER1_type 0 930 598 710 182 8 8 chr20 10727451 10727572 -55940433 + FLAM_A SINE Alu 1 121 -21 3009 178 46 7 chr20 10727587 10728171 -55939834 - MER63C DNA MER1_type -323 607 1 25 0 0 0 chr20 10732355 10732380 -55935625 + AT_rich Low_complexity Low_complexity 1 25 0 506 309 13 7 chr20 10732810 10732959 -55935046 - MIR SINE MIR -105 157 8 282 236 88 59 chr20 10733145 10733319 -55934686 - MIR SINE MIR -60 148 10 875 49 0 16 chr20 10733416 10733538 -55934467 + (GGAA)n Simple_repeat Simple_repeat 4 123 0 324 341 58 7 chr20 10733594 10733732 -55934273 - MIR3 SINE MIR -62 146 2 411 213 75 0 chr20 10734227 10734321 -55933684 + MER5A DNA MER1_type 9 109 -80 589 295 35 46 chr20 10734463 10734721 -55933284 - MIR SINE MIR -11 251 1 470 313 89 38 chr20 10737121 10737492 -55930513 + L1ME LINE L1 5429 5818 -303 466 332 8 10 chr20 10737575 10737929 -55930076 - LTR16B LTR ERVL -12 452 59 8258 25 0 0 chr20 10738346 10739452 -55928553 + L1PA3 LINE L1 5046 6152 -3 29 0 0 0 chr20 10739452 10739481 -55928524 + AT_rich Low_complexity Low_complexity 1 29 0 233 116 0 47 chr20 10740873 10740916 -55927089 - MER3 DNA MER1_type -18 191 151 21 0 0 0 chr20 10742337 10742358 -55925647 + AT_rich Low_complexity Low_complexity 1 21 0 2123 115 7 14 chr20 10742362 10742658 -55925347 - AluSq SINE Alu -19 294 1 198 103 0 0 chr20 10744320 10744349 -55923656 + (T)n Simple_repeat Simple_repeat 1 29 0 501 276 190 21 chr20 10748355 10748739 -55919266 - MLT1H LTR MaLR 0 549 101 * 1272 265 137 7 chr20 10748729 10749166 -55918839 - LTR33 LTR ERVL -18 503 10 677 232 22 61 chr20 10749349 10749530 -55918475 + MER5B DNA MER1_type 5 178 0 286 330 47 98 chr20 10750892 10751210 -55916795 - L2 LINE L2 -5 3267 2966 289 99 62 0 chr20 10753121 10753202 -55914803 + (TA)n Simple_repeat Simple_repeat 1 86 0 919 142 0 37 chr20 10753381 10753543 -55914462 + FRAM SINE Alu 20 175 -1 225 257 43 29 chr20 10753626 10753696 -55914309 + MIR SINE MIR 21 91 -171 226 266 16 0 chr20 10755314 10755378 -55912627 - MIR SINE MIR -16 246 182 428 327 37 25 chr20 10755390 10755552 -55912453 + MIR SINE MIR 6 169 -93 1430 131 89 0 chr20 10755603 10755839 -55912166 - Tigger2 DNA MER2_type 0 2718 2462 3924 154 48 14 chr20 10755909 10756542 -55911463 - Tigger2 DNA MER2_type -2006 712 53 1852 185 0 0 chr20 10756542 10756844 -55911161 + AluJo SINE Alu 1 302 -10 3924 154 48 14 chr20 10756844 10756899 -55911106 - Tigger2 DNA MER2_type -2665 53 1 21 36 0 0 chr20 10757142 10757170 -55910835 + AT_rich Low_complexity Low_complexity 1 28 0 197 65 32 0 chr20 10758101 10758132 -55909873 + (CAA)n Simple_repeat Simple_repeat 2 33 0 21 0 0 0 chr20 10758548 10758569 -55909436 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr20 10758672 10758694 -55909311 + AT_rich Low_complexity Low_complexity 1 22 0 2247 173 77 26 chr20 10759115 10759540 -55908465 - L1MB7 LINE L1 0 6184 5727 2067 105 3 68 chr20 10759540 10759863 -55908142 - AluSx SINE Alu -10 302 1 2247 173 77 26 chr20 10759863 10759945 -55908060 - L1MB7 LINE L1 -457 5727 5651 243 224 0 0 chr20 10759976 10760052 -55907953 + (CCA)n Simple_repeat Simple_repeat 3 78 0 334 234 0 21 chr20 10760141 10760282 -55907723 + (CCA)n Simple_repeat Simple_repeat 2 139 0 402 297 74 55 chr20 10761211 10761413 -55906592 - MIR SINE MIR -27 235 30 607 269 34 97 chr20 10761566 10761819 -55906186 - L2 LINE L2 0 3313 3083 1653 175 18 105 chr20 10761819 10762218 -55905787 - MLT1A1 LTR MaLR 0 365 2 607 269 34 97 chr20 10762218 10762284 -55905721 - L2 LINE L2 -230 3083 3014 1276 245 31 22 chr20 10763080 10763435 -55904570 + LTR16C LTR ERVL 134 491 0 2066 243 90 2 chr20 10764446 10764948 -55903057 - MLT1H LTR MaLR -3 546 1 267 301 20 59 chr20 10766113 10766266 -55901739 - LTR16C LTR ERVL -14 477 331 207 283 0 0 chr20 10766893 10766939 -55901066 + polypurine Low_complexity Low_complexity 3 48 0 23 33 0 0 chr20 10767003 10767033 -55900972 + AT_rich Low_complexity Low_complexity 1 30 0 1457 130 39 0 chr20 10767268 10767498 -55900507 + AluSq SINE Alu 72 310 -3 2365 246 56 18 chr20 10768093 10768231 -55899774 + L1ME3A LINE L1 5518 5649 -521 1353 234 0 0 chr20 10768231 10768470 -55899535 + MER8 DNA MER2_type 1 239 0 2365 246 56 18 chr20 10768470 10768960 -55899045 + L1ME3A LINE L1 5649 6170 0 1253 255 90 28 chr20 10769141 10769608 -55898397 - LTR33 LTR ERVL 0 521 26 596 286 106 61 chr20 10770252 10770629 -55897376 - LTR16C LTR ERVL -2 489 96 445 348 105 21 chr20 10770922 10771304 -55896701 + L2 LINE L2 1932 2345 -969 598 232 158 29 chr20 10771934 10772180 -55895825 - MLT1H LTR MaLR 0 549 272 2428 192 111 8 chr20 10772518 10773024 -55894981 + MLT1F1 LTR MaLR 4 561 -6 192 191 24 0 chr20 10774085 10774127 -55893878 - L2 LINE L2 -213 3059 3017 1291 235 107 26 chr20 10774209 10774491 -55893514 - MLT1D LTR MaLR -1 504 169 1955 148 10 13 chr20 10774491 10774802 -55893203 - AluSx SINE Alu -2 310 1 1291 235 107 26 chr20 10774802 10774978 -55893027 - MLT1D LTR MaLR -336 169 9 204 355 54 43 chr20 10775054 10775240 -55892765 - L2 LINE L2 -474 2840 2653 1116 221 60 28 chr20 10775598 10775915 -55892090 + LTR16A1 LTR ERVL 128 454 -3 886 199 34 6 chr20 10776380 10776556 -55891449 + MER5A DNA MER1_type 9 189 0 2297 101 0 0 chr20 10776628 10776926 -55891079 + AluY SINE Alu 1 298 -13 328 241 7 0 chr20 10777105 10777202 -55890803 + L1MC/D LINE L1 5731 5828 -299 225 217 60 12 chr20 10777343 10777426 -55890579 + (CATATA)n Simple_repeat Simple_repeat 3 89 0 1782 156 4 4 chr20 10777451 10777714 -55890291 + AluJb SINE Alu 4 266 -46 201 74 0 0 chr20 10777723 10777750 -55890255 + (CA)n Simple_repeat Simple_repeat 2 28 0 726 321 78 35 chr20 10777869 10778347 -55889658 - L2 LINE L2 -26 3287 2831 2114 129 13 0 chr20 10778347 10778649 -55889356 - AluSx SINE Alu -6 306 1 726 321 78 35 chr20 10778649 10778897 -55889108 - L2 LINE L2 -482 2831 2520 2200 123 0 0 chr20 10778897 10779190 -55888815 - AluSx SINE Alu -19 293 1 726 321 78 35 chr20 10779190 10779219 -55888786 - L2 LINE L2 -793 2520 2494 702 274 60 41 chr20 10779245 10779563 -55888442 - MLT1H LTR MaLR -195 354 31 2305 65 3 0 chr20 10779851 10780144 -55887861 - AluY SINE Alu -17 294 1 989 182 32 27 chr20 10781975 10782162 -55885843 + MER5A DNA MER1_type 2 189 0 1862 152 0 10 chr20 10783058 10783347 -55884658 - AluJo SINE Alu -15 297 12 241 287 56 28 chr20 10783369 10783477 -55884528 - MLT1J LTR MaLR 0 511 401 237 200 0 0 chr20 10783535 10783575 -55884430 - MLT1J LTR MaLR -201 310 271 220 347 79 41 chr20 10783635 10784004 -55884001 - L2 LINE L2 -1199 2115 1733 1635 191 126 7 chr20 10785189 10785619 -55882386 + L1M4 LINE L1 4822 5302 -844 2106 143 0 0 chr20 10786500 10786807 -55881198 + AluSx SINE Alu 1 307 -5 2045 144 10 0 chr20 10786870 10787169 -55880836 - AluSx SINE Alu -10 302 1 1100 132 17 6 chr20 10787426 10787600 -55880405 + MLT1B LTR MaLR 215 390 0 291 167 25 142 chr20 10788563 10788683 -55879322 + LTR37A LTR ERV1 8 113 -313 2080 177 23 23 chr20 10788702 10789097 -55878908 - L1MB7 LINE L1 -92 6092 5698 926 210 69 34 chr20 10789308 10789570 -55878435 + LTR37A LTR ERV1 151 421 -5 459 169 43 119 chr20 10790527 10790805 -55877200 - LTR37B LTR ERV1 -3 465 209 937 175 63 53 chr20 10791007 10791213 -55876792 + MER58A DNA MER1_type 1 208 -16 2190 181 78 2 chr20 10791235 10791633 -55876372 - MSTA LTR MaLR 0 428 1 312 27 0 0 chr20 10791685 10791722 -55876283 + (T)n Simple_repeat Simple_repeat 1 37 0 22 0 0 0 chr20 10792193 10792215 -55875790 + AT_rich Low_complexity Low_complexity 1 22 0 495 213 0 11 chr20 10792220 10792314 -55875691 - FLAM_A SINE Alu -27 115 23 7335 174 154 23 chr20 10792315 10793867 -55874138 + MER52A LTR ERV1 1 1755 0 573 284 72 54 chr20 10794753 10795157 -55872848 + LTR16C LTR ERVL 6 491 0 211 176 0 0 chr20 10795296 10795330 -55872675 + (CA)n Simple_repeat Simple_repeat 2 35 0 222 150 0 0 chr20 10795330 10795370 -55872635 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 22 70 0 0 chr20 10795436 10795479 -55872526 + AT_rich Low_complexity Low_complexity 1 43 0 1677 98 8 4 chr20 10795548 10795782 -55872223 - AluSq SINE Alu -41 272 38 822 218 79 46 chr20 10797016 10797361 -55870644 + MSTD LTR MaLR 1 396 0 212 278 167 0 chr20 10797971 10798079 -55869926 + MIR SINE MIR 130 255 -7 861 175 84 0 chr20 10798432 10798598 -55869407 - MLT1F1 LTR MaLR -1 566 387 225 0 0 0 chr20 10798640 10798665 -55869340 + (TC)n Simple_repeat Simple_repeat 2 26 0 408 55 0 0 chr20 10798887 10798942 -55869063 + (CA)n Simple_repeat Simple_repeat 2 56 0 24 53 0 0 chr20 10799036 10799074 -55868931 + AT_rich Low_complexity Low_complexity 1 38 0 189 0 0 0 chr20 10799467 10799488 -55868517 + (CA)n Simple_repeat Simple_repeat 2 22 0 390 254 64 9 chr20 10800041 10800151 -55867854 + L2 LINE L2 3191 3306 -7 772 206 23 11 chr20 10800213 10800388 -55867617 - MLT1C LTR MaLR 0 467 291 691 221 94 70 chr20 10800922 10801221 -55866784 - MLT1C LTR MaLR -161 306 1 244 317 58 29 chr20 10801243 10801347 -55866658 - L2 LINE L2 0 3272 3166 21 0 0 0 chr20 10801388 10801409 -55866596 + AT_rich Low_complexity Low_complexity 1 21 0 1916 100 89 0 chr20 10801926 10802197 -55865808 - AluSg SINE Alu -15 295 1 351 174 12 12 chr20 10802197 10802283 -55865722 + MER41B LTR ERV1 512 597 -38 1358 251 47 94 chr20 10802327 10802861 -55865144 - MER21B LTR ERV1 -335 528 20 994 92 0 8 chr20 10802862 10802993 -55865012 - AluSp/q SINE Alu -15 298 169 2253 105 3 3 chr20 10803186 10803481 -55864524 + AluSx SINE Alu 1 295 -17 3082 156 74 15 chr20 10803503 10804087 -55863918 - LTR35 LTR ERV1 0 618 1 2367 103 0 0 chr20 10805278 10805578 -55862427 - AluSg SINE Alu -10 300 1 342 231 39 67 chr20 10805726 10805830 -55862175 - MIR SINE MIR -65 197 97 1453 181 32 48 chr20 10805970 10806280 -55861725 - AluJo SINE Alu -2 310 6 234 366 149 0 chr20 10806733 10806867 -55861138 + MIR SINE MIR 47 200 -62 898 124 0 8 chr20 10807702 10807831 -55860174 - FLAM_C SINE Alu -5 128 1 303 259 72 22 chr20 10807979 10808118 -55859887 + MLT1J2 LTR MaLR 1 146 -304 487 282 11 52 chr20 10808188 10808362 -55859643 + MLT1J2 LTR MaLR 271 437 -13 1002 186 74 63 chr20 10808366 10808433 -55859572 + MLT2B3 LTR ERVL 1 66 -488 1977 133 45 48 chr20 10808433 10808809 -55859196 - THE1C LTR MaLR 0 375 1 1002 186 74 63 chr20 10808809 10809010 -55858995 + MLT2B3 LTR ERVL 66 272 -282 235 171 0 0 chr20 10809010 10809051 -55858954 + MLT2B3 LTR ERVL 472 512 -8 842 231 6 0 chr20 10809096 10809278 -55858727 + MER58A DNA MER1_type 42 224 0 1764 178 7 23 chr20 10809568 10809872 -55858133 + AluJb SINE Alu 1 299 -13 290 302 13 7 chr20 10809879 10810028 -55857977 + L1ME3A LINE L1 5795 5944 -226 3328 46 5 2 chr20 10810116 10810557 -55857448 + L1PA7 LINE L1 5736 6177 0 26 0 0 0 chr20 10810718 10810744 -55857261 + AT_rich Low_complexity Low_complexity 1 26 0 1796 204 43 87 chr20 10812398 10812497 -55855508 - MER92C LTR ERV1 -2 552 450 2067 122 14 0 chr20 10812497 10812785 -55855220 - AluY SINE Alu -19 292 1 1796 204 43 87 chr20 10812785 10813262 -55854743 - MER92C LTR ERV1 -104 450 1 295 310 10 0 chr20 10813577 10813677 -55854328 + MIR SINE MIR 109 209 -53 473 238 166 13 chr20 10813681 10813832 -55854173 - MER5A DNA MER1_type -6 183 10 1309 216 81 30 chr20 10814474 10814544 -55853461 + L1ME3A LINE L1 5520 5585 -577 9454 87 12 5 chr20 10814544 10815820 -55852185 + HSMAR1 DNA Mariner 2 1287 0 1309 216 81 30 chr20 10815820 10816273 -55851732 + L1ME3A LINE L1 5585 6101 -61 2405 240 127 11 chr20 10816306 10817014 -55850991 - MER21B LTR ERV1 -54 809 20 892 196 178 25 chr20 10817026 10817301 -55850704 - MER2 DNA MER2_type -27 318 2 396 241 0 0 chr20 10817327 10817406 -55850599 - MER21B LTR ERV1 -773 90 12 232 226 0 0 chr20 10817420 10817482 -55850523 + L1ME3A LINE L1 6100 6161 -9 1897 160 0 10 chr20 10817708 10818015 -55849990 - AluJb SINE Alu -8 304 1 736 192 24 0 chr20 10818244 10818369 -55849636 - FLAM_C SINE Alu -5 128 1 947 223 99 0 chr20 10818851 10819124 -55848881 + MER46C DNA MER2_type 5 304 -34 196 298 0 0 chr20 10819185 10819242 -55848763 + L3b LINE CR1 1350 1406 -177 2222 104 7 0 chr20 10819486 10819783 -55848222 - AluSp SINE Alu -14 299 1 290 279 193 0 chr20 10819978 10820113 -55847892 - MER5A DNA MER1_type 0 189 28 450 212 212 13 chr20 10820113 10820264 -55847741 - MER5A DNA MER1_type 0 189 9 37 0 0 0 chr20 10820313 10820350 -55847655 + AT_rich Low_complexity Low_complexity 1 37 0 980 175 0 0 chr20 10820648 10820808 -55847197 + FRAM SINE Alu 1 157 -19 482 126 39 48 chr20 10821344 10821427 -55846578 - MER53 DNA DNA 0 189 106 3250 158 40 21 chr20 10821427 10822059 -55845946 - LTR48B LTR ERV1 0 644 1 482 126 39 48 chr20 10822059 10822078 -55845927 - MER53 DNA DNA -83 106 88 185 387 0 13 chr20 10822298 10822373 -55845632 + MIR SINE MIR 23 96 -112 532 176 11 94 chr20 10822389 10822578 -55845427 - MER104 DNA Tc2 -5 175 2 366 326 15 0 chr20 10822922 10823054 -55844951 + (TCCA)n Simple_repeat Simple_repeat 1 134 0 1752 181 64 24 chr20 10823256 10823792 -55844213 + MER39 LTR ERV1 2 689 -18 6270 34 0 0 chr20 10823807 10824549 -55843456 - L1PA3 LINE L1 0 6155 5414 2333 269 93 38 chr20 10824724 10825047 -55842958 - L2 LINE L2 -145 3168 2864 2044 103 0 0 chr20 10825047 10825308 -55842697 + AluY SINE Alu 35 295 -16 2333 269 93 38 chr20 10825308 10825967 -55842038 - L2 LINE L2 -449 2864 2127 2015 257 53 51 chr20 10826307 10826376 -55841629 - MER21B LTR ERV1 -109 754 687 2512 145 5 2 chr20 10826376 10826777 -55841228 + MER57A LTR ERV1 2 403 0 2015 257 53 51 chr20 10826777 10826996 -55841009 - MER21B LTR ERV1 -176 687 470 2361 98 0 7 chr20 10826996 10827301 -55840704 + AluSg SINE Alu 1 303 -7 2015 257 53 51 chr20 10827301 10827761 -55840244 - MER21B LTR ERV1 -393 470 3 748 243 102 26 chr20 10827764 10828141 -55839864 + MLT1G3 LTR MaLR 1 401 -189 1734 168 7 26 chr20 10828229 10828539 -55839466 + AluJb SINE Alu 3 306 -6 348 317 10 0 chr20 10828709 10828813 -55839192 + MIR SINE MIR 48 152 -56 2215 117 7 0 chr20 10829741 10830041 -55837964 - AluSx SINE Alu -10 302 1 183 156 0 0 chr20 10830231 10830263 -55837742 + (TA)n Simple_repeat Simple_repeat 1 32 0 2308 233 75 42 chr20 10830353 10831343 -55836662 + L1ME3A LINE L1 5130 6159 -11 488 262 147 28 chr20 10831976 10832151 -55835854 - L1MC5 LINE L1 -54 7907 7754 306 0 0 0 chr20 10832151 10832185 -55835820 + (CA)n Simple_repeat Simple_repeat 2 35 0 488 262 147 28 chr20 10832185 10832398 -55835607 - L1MC5 LINE L1 -207 7754 7473 1901 107 50 11 chr20 10832432 10832713 -55835292 + AluSx SINE Alu 1 292 -20 768 280 60 4 chr20 10832889 10833105 -55834900 - MIR SINE MIR -10 252 21 1945 164 0 0 chr20 10833105 10833409 -55834596 - AluJo SINE Alu -8 304 1 768 280 60 4 chr20 10833409 10833424 -55834581 - MIR SINE MIR -241 21 8 2241 129 0 0 chr20 10833957 10834260 -55833745 + AluSx SINE Alu 1 303 -9 2707 105 3 0 chr20 10834810 10835173 -55832832 - THE1B LTR MaLR 0 364 1 289 209 157 17 chr20 10835445 10835560 -55832445 - L1ME4a LINE L1 0 6121 5991 1942 158 17 0 chr20 10836507 10836805 -55831200 - AluSx SINE Alu -9 303 1 273 119 0 0 chr20 10839912 10839954 -55828051 + (A)n Simple_repeat Simple_repeat 1 42 0 2859 116 113 0 chr20 10839958 10840408 -55827597 + MER61D LTR ERV1 1 501 0 244 167 17 50 chr20 10840454 10840514 -55827491 + L1M4 LINE L1 4105 4162 -1984 643 280 0 7 chr20 10840524 10840674 -55827331 + FRAM SINE Alu 4 152 -14 293 253 102 45 chr20 10840678 10840943 -55827062 + L1M4 LINE L1 4378 4657 -1489 287 242 30 0 chr20 10840943 10841009 -55826996 + L2 LINE L2 3246 3313 0 511 300 156 66 chr20 10841022 10841039 -55826966 + L2 LINE L2 2203 2217 -1055 2108 137 58 65 chr20 10841039 10841102 -55826903 - MSTB1 LTR MaLR -4 428 366 2250 111 3 9 chr20 10841102 10841417 -55826588 + AluSq SINE Alu 1 313 0 2108 137 58 65 chr20 10841417 10841430 -55826575 - MSTB1 LTR MaLR -66 366 354 2342 96 0 10 chr20 10841430 10841742 -55826263 + AluSc SINE Alu 1 309 0 2108 137 58 65 chr20 10841742 10842095 -55825910 - MSTB1 LTR MaLR -78 354 1 511 300 156 66 chr20 10842095 10842329 -55825676 + L2 LINE L2 2217 2429 -843 1638 179 33 0 chr20 10842329 10842631 -55825374 - AluJo SINE Alu 0 312 1 511 300 156 66 chr20 10842631 10842854 -55825151 + L2 LINE L2 2429 2631 -641 798 161 32 0 chr20 10842854 10842978 -55825027 + FLAM_C SINE Alu 1 128 -5 511 300 156 66 chr20 10842978 10843234 -55824771 + L2 LINE L2 2631 3000 -272 1654 192 65 0 chr20 10843297 10843589 -55824416 + AluSx SINE Alu 1 311 -1 181 171 229 133 chr20 10843688 10843716 -55824289 + L2 LINE L2 3199 3223 -90 2599 58 0 3 chr20 10843716 10844027 -55823978 - AluY SINE Alu -1 310 1 181 171 229 133 chr20 10844027 10844103 -55823902 + L2 LINE L2 3223 3313 0 572 131 0 0 chr20 10844184 10844268 -55823737 - AluJ/FRAM SINE Alu -13 299 216 215 196 143 0 chr20 10845388 10845444 -55822561 - MIR SINE MIR -12 250 187 360 0 0 0 chr20 10845522 10845562 -55822443 + (TTA)n Simple_repeat Simple_repeat 2 41 0 10244 37 7 103 chr20 10845577 10847111 -55820894 - SVA Other Other 0 1386 1 374 311 80 22 chr20 10847537 10848186 -55819819 + L1M4 LINE L1 4371 5057 -1089 481 328 103 27 chr20 10848362 10848770 -55819235 + L1M4 LINE L1 5257 5695 -483 538 263 26 13 chr20 10848864 10849020 -55818985 - LTR16A1 LTR ERVL -299 158 1 1930 174 3 0 chr20 10849268 10849573 -55818432 - AluSx SINE Alu -6 306 1 909 152 9 3 chr20 10849842 10850073 -55817932 - MER2 DNA MER2_type 0 345 59 1144 213 117 46 chr20 10850179 10850615 -55817390 + MLT1C LTR MaLR 1 467 0 469 260 83 71 chr20 10851187 10851405 -55816600 + L1ME4a LINE L1 5612 5839 -282 723 103 0 0 chr20 10851405 10851512 -55816493 + L1MA3 LINE L1 6198 6304 -1 469 260 83 71 chr20 10851512 10851716 -55816289 + L1ME4a LINE L1 5839 6039 -82 183 42 0 0 chr20 10851717 10851741 -55816264 + (TG)n Simple_repeat Simple_repeat 2 25 0 29 0 0 0 chr20 10851783 10851812 -55816193 + AT_rich Low_complexity Low_complexity 1 29 0 2495 71 6 0 chr20 10851815 10852126 -55815879 + AluSp SINE Alu 1 313 0 1290 232 125 27 chr20 10854161 10854663 -55813342 - MLT1F1 LTR MaLR -2 565 1 330 201 49 183 chr20 10854663 10854887 -55813118 - MLT1F1-int LTR MaLR -41 1330 1137 355 178 133 11 chr20 10854977 10855067 -55812938 - MLT1E LTR MaLR -492 101 1 1266 158 29 5 chr20 10855609 10855818 -55812187 + MER20 DNA MER1_type 4 217 -2 23 0 0 0 chr20 10856306 10856329 -55811676 + AT_rich Low_complexity Low_complexity 1 23 0 2046 141 39 0 chr20 10857585 10857919 -55810086 + MER7A DNA MER2_type 2 346 0 22 94 0 0 chr20 10858342 10858406 -55809599 + AT_rich Low_complexity Low_complexity 1 64 0 303 152 0 15 chr20 10858742 10858808 -55809197 + L1PA13 LINE L1 6096 6160 -3 2425 82 6 22 chr20 10860973 10861288 -55806717 + AluSx SINE Alu 1 310 -2 231 275 92 69 chr20 10861463 10861594 -55806411 + MIR SINE MIR 35 168 -94 2136 113 14 3 chr20 10861631 10861924 -55806081 + AluSx SINE Alu 1 296 -16 2211 87 17 7 chr20 10862277 10862566 -55805439 - AluSc SINE Alu -17 292 1 664 194 40 0 chr20 10862567 10862691 -55805314 - FLAM_A SINE Alu -4 129 1 226 250 59 15 chr20 10863222 10863290 -55804715 - L2 LINE L2 -8 3264 3194 2295 97 3 0 chr20 10865548 10865846 -55802159 - AluSp SINE Alu -13 300 2 793 226 78 94 chr20 10867563 10868053 -55799952 + L1MC5 LINE L1 6725 7206 -755 1020 237 9 9 chr20 10868064 10868283 -55799722 + MER58A DNA MER1_type 5 223 -1 1458 115 28 14 chr20 10868330 10868548 -55799457 + AluSg/x SINE Alu 80 300 -10 1616 186 4 0 chr20 10868611 10868885 -55799120 + AluJo SINE Alu 1 275 -37 308 113 0 81 chr20 10868885 10868947 -55799058 + AluJo/FRAM SINE Alu 201 257 -45 378 289 145 38 chr20 10869034 10869564 -55798441 + L1MC5 LINE L1 7268 7854 -107 478 255 19 66 chr20 10870543 10870755 -55797250 - MER46C DNA MER2_type 0 338 137 902 116 0 20 chr20 10870765 10870911 -55797094 - Tigger7 DNA MER2_type -6 2581 2439 * 1595 193 72 0 chr20 10870906 10871227 -55796778 - Tigger7 DNA MER2_type -389 344 1 488 202 101 8 chr20 10871228 10871347 -55796658 - MER46C DNA MER2_type -207 131 2 35 0 0 0 chr20 10872393 10872428 -55795577 + AT_rich Low_complexity Low_complexity 1 35 0 1961 139 45 0 chr20 10872430 10872718 -55795287 + AluSx SINE Alu 1 301 -11 32 0 0 0 chr20 10873053 10873085 -55794920 + AT_rich Low_complexity Low_complexity 1 32 0 2525 61 0 0 chr20 10873996 10874293 -55793712 - AluY SINE Alu -14 297 1 1304 200 76 17 chr20 10874437 10874727 -55793278 + AluJb SINE Alu 1 307 -5 29 46 0 31 chr20 10875510 10875556 -55792449 + AT_rich Low_complexity Low_complexity 1 46 -17 720 174 8 30 chr20 10875556 10875688 -55792317 + FLAM_C SINE Alu 1 129 -4 29 46 0 31 chr20 10875688 10875706 -55792299 + AT_rich Low_complexity Low_complexity 46 63 0 2460 84 0 3 chr20 10876052 10876362 -55791643 + AluSq SINE Alu 1 309 -4 1840 129 35 3 chr20 10877691 10877977 -55790028 - AluSx SINE Alu -13 299 5 459 0 0 0 chr20 10878312 10878363 -55789642 + (CA)n Simple_repeat Simple_repeat 2 52 0 1938 132 3 21 chr20 10879839 10880148 -55787857 + AluSx SINE Alu 1 304 0 288 360 130 24 chr20 10880576 10881070 -55786935 + L2 LINE L2 2063 2644 -670 936 205 27 5 chr20 10881070 10881255 -55786750 + MER5A DNA MER1_type 1 189 0 288 360 130 24 chr20 10881255 10881416 -55786589 + L2 LINE L2 2644 2787 -527 656 270 149 18 chr20 10881515 10881737 -55786268 + MIR SINE MIR 12 262 0 364 261 236 6 chr20 10882248 10882409 -55785596 + MIR SINE MIR 65 262 0 405 0 0 0 chr20 10882810 10882855 -55785150 + (CAAAC)n Simple_repeat Simple_repeat 2 46 0 354 259 77 14 chr20 10883107 10883250 -55784755 + L2 LINE L2 2982 3133 -180 1241 251 101 7 chr20 10883255 10883661 -55784344 + LTR16A LTR ERVL 1 444 -6 1558 145 29 71 chr20 10883698 10883793 -55784212 + MER2 DNA MER2_type 1 99 -246 2040 92 30 20 chr20 10883793 10884098 -55783907 + AluSx SINE Alu 1 308 -4 1558 145 29 71 chr20 10884098 10884288 -55783717 + MER2 DNA MER2_type 99 271 -74 1816 131 20 7 chr20 10884288 10884586 -55783419 - AluSx SINE Alu -10 302 1 1558 145 29 71 chr20 10884586 10884650 -55783355 + MER2 DNA MER2_type 271 336 -9 313 306 91 88 chr20 10885122 10885540 -55782465 + L1M2 LINE L1 276 694 -6155 279 250 183 10 chr20 10887114 10887218 -55780787 - L2 LINE L2 0 3313 3192 26 30 0 0 chr20 10887319 10887352 -55780653 + AT_rich Low_complexity Low_complexity 1 33 0 402 240 19 0 chr20 10887465 10887569 -55780436 + MER5A DNA MER1_type 4 109 -80 2193 96 7 0 chr20 10887635 10887937 -55780068 - AluSx SINE Alu -8 304 1 847 240 5 0 chr20 10888396 10888588 -55779417 - AluJo SINE Alu 0 312 120 295 210 74 25 chr20 10888605 10888686 -55779319 - MER5B DNA MER1_type 0 178 94 192 299 39 13 chr20 10888875 10888952 -55779053 + MIR SINE MIR 68 146 -116 827 270 117 4 chr20 10889105 10889335 -55778670 + MIR SINE MIR 2 257 -5 613 148 106 0 chr20 10889522 10889536 -55778469 - L1MA10 LINE L1 -3 6331 6318 499 196 134 46 chr20 10889536 10889730 -55778275 - L1ME2 LINE L1 -9 6155 5945 1992 131 40 14 chr20 10889755 10890052 -55777953 - AluSx SINE Alu -7 305 1 736 149 35 21 chr20 10890147 10890288 -55777717 - FLAM_C SINE Alu 0 143 1 542 231 0 7 chr20 10890290 10890437 -55777568 - L1ME2 LINE L1 -298 5868 5723 1784 167 20 3 chr20 10890492 10890792 -55777213 - AluJb SINE Alu -7 305 1 2141 140 0 10 chr20 10891455 10891769 -55776236 + AluSx SINE Alu 1 311 -1 376 264 65 69 chr20 10891782 10891998 -55776007 - L1ME1 LINE L1 -17 6149 5935 506 294 92 43 chr20 10892164 10892370 -55775635 - MIR SINE MIR -17 245 48 1917 154 0 7 chr20 10892435 10892741 -55775264 + AluJb SINE Alu 1 304 -8 210 37 0 0 chr20 10894501 10894528 -55773477 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 235 321 123 37 chr20 10894625 10894893 -55773112 - L2 LINE L2 -95 3177 2887 2093 130 138 5 chr20 10894962 10895340 -55772665 + MSTA LTR MaLR 1 428 0 1757 199 11 30 chr20 10895518 10895657 -55772348 - MLT1A1 LTR MaLR 0 365 225 2374 93 0 0 chr20 10895657 10895958 -55772047 - AluSg SINE Alu -9 301 1 1757 199 11 30 chr20 10895958 10896190 -55771815 - MLT1A1 LTR MaLR -140 225 1 2370 96 6 3 chr20 10896585 10896897 -55771108 - AluSq SINE Alu 0 313 1 2251 107 0 3 chr20 10896910 10897208 -55770797 - AluSx SINE Alu -15 297 1 2774 189 97 20 chr20 10897234 10897414 -55770591 - L1MD2 LINE L1 -475 5884 5719 2269 116 0 0 chr20 10897414 10897715 -55770290 + AluSg SINE Alu 1 301 -9 2774 189 97 20 chr20 10897715 10898452 -55769553 - L1MD2 LINE L1 -640 5719 4883 316 167 73 52 chr20 10898727 10898823 -55769182 - L1MD2 LINE L1 -1700 4446 4349 387 241 188 18 chr20 10898845 10898973 -55769032 - L1MD2 LINE L1 -2099 4047 3942 1897 137 16 22 chr20 10898973 10899287 -55768718 - AluJo SINE Alu 0 312 1 387 241 188 18 chr20 10899287 10899552 -55768453 - L1MD2 LINE L1 -2204 3942 3587 22 0 0 0 chr20 10901092 10901114 -55766891 + AT_rich Low_complexity Low_complexity 1 22 0 236 298 149 7 chr20 10902003 10902036 -55765969 - MIR SINE MIR 0 262 235 2445 47 0 3 chr20 10902036 10902333 -55765672 - AluY SINE Alu -14 297 2 236 298 149 7 chr20 10902333 10902440 -55765565 - MIR SINE MIR -27 235 102 2133 124 3 0 chr20 10902444 10902742 -55765263 - AluSx SINE Alu -13 299 1 1121 169 86 36 chr20 10902774 10902969 -55765036 + MER33 DNA MER1_type 1 218 -2367 2225 116 0 3 chr20 10902969 10903272 -55764733 + AluSg SINE Alu 1 302 -8 1121 169 86 36 chr20 10903272 10903377 -55764628 + MER33 DNA MER1_type 218 316 -8 1548 163 0 101 chr20 10903531 10903666 -55764339 + AluJb SINE Alu 1 148 -164 2394 91 7 0 chr20 10903666 10903964 -55764041 + AluSq SINE Alu 1 300 -13 1548 163 0 101 chr20 10903964 10904186 -55763819 + AluJb SINE Alu 148 312 0 925 260 184 27 chr20 10904325 10904590 -55763415 - HAL1 LINE L1 -278 2229 2007 234 0 0 0 chr20 10904590 10904616 -55763389 + (TG)n Simple_repeat Simple_repeat 2 27 0 925 260 184 27 chr20 10904616 10905085 -55762920 - HAL1 LINE L1 -500 2007 1380 1665 267 115 8 chr20 10905109 10905848 -55762157 - HAL1 LINE L1 -1286 1221 404 6152 207 47 19 chr20 10905871 10906862 -55761143 - L1M4 LINE L1 -358 5889 4927 2032 127 0 3 chr20 10906862 10907193 -55760812 - AluSx SINE Alu 0 330 1 6152 207 47 19 chr20 10907193 10907218 -55760787 - L1M4 LINE L1 -1320 4927 4904 2167 137 26 0 chr20 10907218 10907569 -55760436 + MER46B DNA MER2_type 2 236 0 6152 207 47 19 chr20 10907569 10907607 -55760398 - L1M4 LINE L1 -1343 4904 4869 2354 92 0 19 chr20 10907607 10907923 -55760082 - AluSg SINE Alu 0 310 1 6152 207 47 19 chr20 10907923 10909120 -55758885 - L1M4 LINE L1 -1378 4869 3581 857 165 0 0 chr20 10909127 10909260 -55758745 - FLAM_C SINE Alu 0 133 1 6199 96 0 3 chr20 10909639 10910703 -55757302 - L1PA11 LINE L1 0 6174 5096 341 294 44 0 chr20 10911362 10911554 -55756451 - L1M4 LINE L1 -856 1720 1537 408 292 121 53 chr20 10911555 10912011 -55755994 - MLT1H1 LTR MaLR 0 555 69 327 231 100 25 chr20 10912091 10912377 -55755628 - L1MEd LINE L1 -4354 1775 1102 1191 154 0 40 chr20 10913065 10913266 -55754739 - AluJb SINE Alu -17 295 103 1704 247 92 24 chr20 10913266 10914006 -55753999 + HAL1 LINE L1 983 1772 -735 1421 169 119 70 chr20 10914064 10914220 -55753785 - LTR48B LTR ERV1 0 729 582 758 180 0 8 chr20 10914220 10914342 -55753663 + FLAM_A SINE Alu 1 121 -12 1421 169 119 70 chr20 10914342 10914803 -55753202 - LTR48B LTR ERV1 -147 582 2 801 248 27 19 chr20 10914804 10915062 -55752943 + HAL1 LINE L1 1854 2113 -394 696 181 0 0 chr20 10915062 10915178 -55752827 - FRAM SINE Alu -10 166 51 263 240 103 34 chr20 10915271 10915446 -55752559 + HAL1 LINE L1 2243 2429 -78 754 181 0 0 chr20 10915459 10915603 -55752402 - FLAM_A SINE Alu 0 144 1 745 154 0 39 chr20 10915681 10915811 -55752194 + FLAM_C SINE Alu 1 125 -8 682 159 0 32 chr20 10916114 10916240 -55751765 - FLAM_A SINE Alu -11 122 1 783 216 57 23 chr20 10916552 10916728 -55751277 + MER58A DNA MER1_type 1 182 -42 2103 129 0 23 chr20 10916779 10917088 -55750917 - AluSx SINE Alu -10 302 1 391 233 0 0 chr20 10917102 10917188 -55750817 - MER33 DNA MER1_type -238 86 1 1231 55 88 6 chr20 10920220 10920401 -55747604 + MER30 DNA MER1_type 1 196 -34 23 0 0 0 chr20 10920786 10920809 -55747196 + AT_rich Low_complexity Low_complexity 1 23 0 282 393 16 22 chr20 10922181 10922364 -55745641 + MIR SINE MIR 27 208 -54 186 313 47 0 chr20 10922537 10922601 -55745404 - L2 LINE L2 -6 3307 3241 481 305 85 14 chr20 10922983 10923356 -55744649 - MLT1H LTR MaLR -75 480 76 265 275 25 12 chr20 10923435 10923515 -55744490 + MIR3 SINE MIR 123 203 -5 2341 88 0 0 chr20 10923517 10923812 -55744193 - AluY SINE Alu -16 295 1 309 262 67 47 chr20 10923851 10924000 -55744005 + MIR SINE MIR 4 155 -107 259 152 43 0 chr20 10924605 10924651 -55743354 + MER5A DNA MER1_type 1 48 -141 244 276 81 11 chr20 10924680 10924767 -55743238 + MIR SINE MIR 170 262 0 1634 100 0 14 chr20 10924885 10925105 -55742900 - AluSx SINE Alu -12 300 84 2264 112 3 0 chr20 10925110 10925405 -55742600 - AluSx SINE Alu -16 296 1 625 130 0 0 chr20 10925406 10925498 -55742507 - AluSx SINE Alu -220 92 1 1927 110 64 0 chr20 10928448 10928712 -55739293 - AluSg SINE Alu -15 295 15 1099 75 0 0 chr20 10928716 10928849 -55739156 - AluSq/x SINE Alu -179 133 1 271 280 203 17 chr20 10928906 10929024 -55738981 + MIR SINE MIR 110 249 -13 2169 100 3 7 chr20 10929181 10929481 -55738524 - AluSx SINE Alu -13 299 1 288 335 105 0 chr20 10929607 10929759 -55738246 - MIR SINE MIR -74 188 21 21 57 0 0 chr20 10929851 10929886 -55738119 + AT_rich Low_complexity Low_complexity 1 35 0 2266 84 17 3 chr20 10930631 10930929 -55737076 - AluSg SINE Alu -8 302 1 2135 121 0 0 chr20 10931006 10931304 -55736701 + AluSc SINE Alu 1 298 -11 1714 164 3 39 chr20 10931394 10931706 -55736299 + AluJb SINE Alu 1 301 -11 319 250 134 39 chr20 10931713 10932049 -55735956 - HAL1b LINE L1 -97 1251 884 998 259 7 24 chr20 10932066 10932359 -55735646 - HAL1b LINE L1 -768 580 293 426 127 13 0 chr20 10932443 10932522 -55735483 - L1PB4 LINE L1 -8 6148 6069 577 150 0 0 chr20 10932523 10932623 -55735382 + L1P5 LINE L1 5652 5751 -405 262 281 44 9 chr20 10932664 10932778 -55735227 - HAL1b LINE L1 -1158 190 73 1267 253 119 26 chr20 10932938 10933432 -55734573 - MLT1F LTR MaLR 0 542 3 484 239 78 0 chr20 10934023 10934165 -55733840 + L1ME1 LINE L1 6009 6161 -5 1780 159 7 7 chr20 10934398 10934704 -55733301 - AluSx SINE Alu 0 306 1 39 60 0 0 chr20 10934851 10934918 -55733087 + AT_rich Low_complexity Low_complexity 1 67 0 1131 199 65 78 chr20 10935065 10935513 -55732492 + MER39 LTR ERV1 266 707 0 186 257 174 46 chr20 10935839 10935948 -55732057 + L2 LINE L2 3190 3312 -1 2193 126 27 105 chr20 10936527 10936603 -55731402 - Tigger2 DNA MER2_type 0 2718 2638 1888 112 13 64 chr20 10936603 10936916 -55731089 + AluSx SINE Alu 1 297 -15 2193 126 27 105 chr20 10936916 10937323 -55730682 - Tigger2 DNA MER2_type -80 2638 2273 375 179 15 0 chr20 10937313 10937380 -55730625 - Tigger2 DNA MER2_type -2650 68 1 * 24 0 0 0 chr20 10937462 10937486 -55730519 + AT_rich Low_complexity Low_complexity 1 24 0 212 229 220 28 chr20 10937737 10937846 -55730159 - MIR SINE MIR -32 230 101 1765 170 93 36 chr20 10939394 10939836 -55728169 + MLT1C LTR MaLR 1 467 0 371 293 43 21 chr20 10939836 10939968 -55728037 + MIR3 SINE MIR 62 199 -9 29 60 0 0 chr20 10941534 10941584 -55726421 + AT_rich Low_complexity Low_complexity 1 50 0 452 307 102 31 chr20 10942642 10942935 -55725070 - HAL1b LINE L1 -833 515 202 586 311 37 22 chr20 10943354 10943755 -55724250 - L1ME LINE L1 -359 6205 5800 266 262 106 14 chr20 10943838 10943979 -55724026 - L1ME LINE L1 -893 5647 5494 278 263 189 44 chr20 10944202 10944258 -55723747 - L1ME LINE L1 -1353 5187 5140 817 143 0 0 chr20 10944258 10944384 -55723621 - FLAM_C SINE Alu -5 128 3 278 263 189 44 chr20 10944384 10944555 -55723450 - L1ME LINE L1 -1400 5140 4927 402 349 86 0 chr20 10944591 10944846 -55723159 - L1ME LINE L1 -1710 4830 4554 309 283 58 0 chr20 10944890 10945010 -55722995 - L1ME LINE L1 -1984 4556 4430 815 176 0 0 chr20 10945147 10945278 -55722727 - FLAM_C SINE Alu 0 133 3 243 148 37 0 chr20 10945626 10945680 -55722325 + (TTA)n Simple_repeat Simple_repeat 3 58 0 1307 145 92 0 chr20 10946123 10946406 -55721599 + L1MA7 LINE L1 5981 6289 -2 537 286 96 56 chr20 10946435 10947180 -55720825 - L1ME LINE L1 -3149 3391 2594 326 254 75 94 chr20 10947267 10947431 -55720574 - L1ME LINE L1 -3905 2635 2474 866 121 102 19 chr20 10947431 10947588 -55720417 - L1MA4A LINE L1 -1 6302 6133 326 254 75 94 chr20 10947588 10947624 -55720381 - L1ME LINE L1 -4066 2474 2439 357 247 101 95 chr20 10947707 10948093 -55719912 - MLT1L LTR MaLR -25 486 109 405 324 200 25 chr20 10948482 10948837 -55719168 - HAL1 LINE L1 -860 1647 1231 554 204 78 24 chr20 10949271 10949438 -55718567 + MER104 DNA MER2_type 2 177 -3 222 118 0 0 chr20 10949946 10949980 -55718025 + (T)n Simple_repeat Simple_repeat 1 34 0 24 0 0 0 chr20 10950364 10950388 -55717617 + AT_rich Low_complexity Low_complexity 1 24 0 506 269 66 33 chr20 10950617 10950799 -55717206 + MER112 DNA MER1_type 67 254 -6 2041 116 24 3 chr20 10951410 10951702 -55716303 - AluSx SINE Alu -5 307 10 1876 167 6 6 chr20 10951751 10952062 -55715943 + AluJo SINE Alu 1 311 -1 1059 267 123 35 chr20 10953563 10954197 -55713808 + L2 LINE L2 2628 3305 -8 1853 176 75 19 chr20 10954890 10955333 -55712672 - MLT1C LTR MaLR -4 463 3 182 186 47 23 chr20 10956981 10957024 -55710981 + L2 LINE L2 2441 2484 -830 25 51 0 0 chr20 10957084 10957123 -55710882 + AT_rich Low_complexity Low_complexity 1 39 0 231 294 91 75 chr20 10957689 10957876 -55710129 - L2 LINE L2 -1 3312 3123 350 219 65 191 chr20 10957893 10958155 -55709850 - L2 LINE L2 -40 3273 3072 1151 126 61 40 chr20 10958155 10958353 -55709652 - L1MA9 LINE L1 0 6312 6111 350 219 65 191 chr20 10958353 10958473 -55709532 - L2 LINE L2 -241 3072 2939 307 247 177 51 chr20 10958488 10958745 -55709260 - L2 LINE L2 -261 3052 2754 238 323 52 21 chr20 10958836 10958932 -55709073 + L2 LINE L2 3152 3250 -22 365 203 8 98 chr20 10959006 10959129 -55708876 - L1ME4a LINE L1 -44 6077 5966 325 125 0 28 chr20 10959187 10959259 -55708746 + (TA)n Simple_repeat Simple_repeat 1 70 0 254 330 51 25 chr20 10960548 10960666 -55707339 - MIR3 SINE MIR -23 185 65 290 286 0 0 chr20 10960880 10960950 -55707055 + L1ME4a LINE L1 5669 5738 -383 1294 164 102 36 chr20 10960979 10961254 -55706751 - AluJo SINE Alu -14 298 6 232 188 43 140 chr20 10961261 10961447 -55706558 + L1ME4a LINE L1 5768 5935 -186 2253 93 0 3 chr20 10961852 10962185 -55705820 - AluSc SINE Alu 0 333 2 240 202 138 83 chr20 10962736 10962845 -55705160 - L3 LINE CR1 -196 1381 1267 245 250 0 95 chr20 10962878 10962994 -55705011 - MIR SINE MIR -51 211 107 199 258 180 0 chr20 10963041 10963130 -55704875 - L3 LINE CR1 -292 1285 1181 1037 250 5 0 chr20 10963318 10963530 -55704475 - MER58A DNA MER1_type 0 224 12 321 190 63 38 chr20 10963600 10963679 -55704326 - MER94 DNA DNA -52 82 2 808 169 104 13 chr20 10963700 10963854 -55704151 - AluJo SINE Alu -20 292 125 683 78 39 30 chr20 10963867 10964105 -55703900 + (TA)n Simple_repeat Simple_repeat 1 240 0 575 196 0 39 chr20 10964116 10964218 -55703787 - AluJ/FLAM SINE Alu -213 99 2 663 301 34 10 chr20 10964448 10964654 -55703351 - MIR SINE MIR -29 233 23 2207 128 0 0 chr20 10966362 10966667 -55701338 - AluSq SINE Alu -8 305 1 1690 198 3 0 chr20 10967162 10967470 -55700535 - AluJb SINE Alu -3 309 1 416 276 116 74 chr20 10967555 10967892 -55700113 - MARNA DNA Mariner -215 371 21 317 256 104 30 chr20 10968799 10968963 -55699042 + MIR SINE MIR 17 192 -70 281 299 73 55 chr20 10969032 10969196 -55698809 + MIR3 SINE MIR 36 202 -6 1339 114 25 10 chr20 10969267 10969469 -55698536 + L1PA11 LINE L1 5969 6173 -1 1728 173 26 7 chr20 10969622 10969659 -55698346 - AluJb SINE Alu 0 536 501 1060 68 28 17 chr20 10969659 10969835 -55698170 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 1728 173 26 7 chr20 10969835 10970152 -55697853 - AluJb SINE Alu -35 501 1 313 182 15 0 chr20 10970323 10970389 -55697616 - L1MB8 LINE L1 -10 6168 6102 233 265 0 0 chr20 10970415 10970464 -55697541 - L1ME2 LINE L1 -57 6107 6059 5158 157 29 32 chr20 10970469 10971324 -55696681 - L1MB7 LINE L1 -1 6183 5324 2346 84 10 0 chr20 10971324 10971632 -55696373 - AluY SINE Alu 0 311 1 5158 157 29 32 chr20 10971632 10972078 -55695927 - L1MB7 LINE L1 -860 5324 4878 415 208 15 39 chr20 10972134 10972264 -55695741 - HAL1 LINE L1 -77 2430 2304 528 247 89 108 chr20 10972308 10972725 -55695280 - HAL1 LINE L1 -343 2164 1756 186 349 0 0 chr20 10972760 10972826 -55695179 - MIR SINE MIR -70 138 73 359 267 52 17 chr20 10974862 10974978 -55693027 + L2 LINE L2 3153 3272 0 21 0 0 0 chr20 10975864 10975885 -55692120 + AT_rich Low_complexity Low_complexity 1 21 0 349 359 28 0 chr20 10976164 10976306 -55691699 + L2 LINE L2 2553 2698 -616 1085 252 109 58 chr20 10976584 10977216 -55690789 - HAL1 LINE L1 -179 2328 1665 413 173 0 0 chr20 10977841 10977916 -55690089 - MLT1D LTR MaLR 0 505 431 1825 161 14 3 chr20 10977951 10978236 -55689769 + AluJb SINE Alu 1 288 -24 341 242 0 0 chr20 10978239 10978305 -55689700 - FAM SINE Alu -17 158 93 253 306 130 9 chr20 10978401 10978509 -55689496 - L2 LINE L2 0 3272 3152 306 148 19 0 chr20 10979484 10979538 -55688467 + L1MC4 LINE L1 7988 8042 0 23 0 0 0 chr20 10980356 10980379 -55687626 + AT_rich Low_complexity Low_complexity 1 23 0 2274 117 0 7 chr20 10980589 10980897 -55687108 + AluSx SINE Alu 1 306 -6 817 321 64 13 chr20 10982772 10983161 -55684844 - L2 LINE L2 -9 3304 2896 250 291 29 39 chr20 10983390 10983493 -55684512 + Charlie7 DNA MER1_type 2 103 -2509 803 109 94 2 chr20 10983497 10983652 -55684353 + L1MA7 LINE L1 6122 6285 -6 2174 125 0 3 chr20 10984061 10984357 -55683648 - AluSg SINE Alu -15 295 1 316 315 71 22 chr20 10984515 10984585 -55683420 - L1M4 LINE L1 -3680 2466 2401 1968 121 6 54 chr20 10984585 10984900 -55683105 - AluSx SINE Alu -12 300 1 1992 166 0 0 chr20 10984900 10985202 -55682803 - AluJb SINE Alu -10 302 1 316 315 71 22 chr20 10985202 10985314 -55682691 - L1M4 LINE L1 -3744 2402 2274 230 246 33 16 chr20 10985561 10985622 -55682383 - L2 LINE L2 -5 3308 3247 232 251 52 139 chr20 10985982 10986115 -55681890 - L2 LINE L2 -423 2891 2748 436 290 15 8 chr20 10986115 10986246 -55681759 + MER94 DNA DNA 2 133 -1 232 251 52 139 chr20 10986246 10986494 -55681511 - L2 LINE L2 -566 2748 2543 2238 111 3 0 chr20 10986606 10986903 -55681102 - AluSx SINE Alu -14 298 1 866 149 0 22 chr20 10987527 10987661 -55680344 + FLAM_C SINE Alu 1 131 -2 764 209 133 36 chr20 10989574 10989770 -55678235 - MER20 DNA MER1_type 0 219 5 2262 104 0 3 chr20 10989812 10990109 -55677896 - AluSx SINE Alu -16 296 1 826 197 22 28 chr20 10991016 10991194 -55676811 - MER5B DNA MER1_type 0 178 2 655 212 45 0 chr20 10991203 10991335 -55676670 + MER5A DNA MER1_type 1 138 -51 854 113 25 12 chr20 10991344 10991504 -55676501 + CT-rich Low_complexity Low_complexity 3 164 0 369 125 0 16 chr20 10991540 10991604 -55676401 + MER5A DNA MER1_type 127 189 0 838 151 68 92 chr20 10992741 10992947 -55675058 - MER3 DNA MER1_type -4 205 5 400 316 42 36 chr20 10993064 10993232 -55674773 - MIR SINE MIR -73 189 21 814 326 159 38 chr20 10993526 10994393 -55673612 - L3 LINE CR1 -140 1437 466 271 149 0 0 chr20 10994403 10994450 -55673555 - L2 LINE L2 -4 3309 3263 * 2268 233 95 20 chr20 10994449 10995083 -55672922 - L2 LINE L2 -781 2533 1853 261 394 8 0 chr20 10995080 10995207 -55672798 - L3 LINE CR1 -1101 476 349 * 1796 162 0 10 chr20 10995673 10995969 -55672036 - AluJb SINE Alu -19 293 1 786 218 16 57 chr20 10996224 10996417 -55671588 - MER5A DNA MER1_type 0 189 5 293 301 153 31 chr20 10997839 10998035 -55669970 - MIR SINE MIR -6 256 37 187 263 51 102 chr20 10999081 10999218 -55668787 - L2 LINE L2 -5 3267 3138 273 308 44 11 chr20 10999327 10999418 -55668587 - MIR3 SINE MIR -13 195 102 2488 54 0 3 chr20 10999524 10999821 -55668184 - AluY SINE Alu -15 296 1 336 306 46 0 chr20 11000033 11000141 -55667864 + MIR SINE MIR 150 262 0 540 281 96 15 chr20 11000943 11001142 -55666863 + MIR SINE MIR 48 262 0 216 97 0 0 chr20 11003671 11003702 -55664303 + (T)n Simple_repeat Simple_repeat 1 31 0 1479 224 50 20 chr20 11004329 11004788 -55663217 + Charlie4a DNA MER1_type 27 499 -9 476 227 106 71 chr20 11004904 11005102 -55662903 + MER112 DNA MER1_type 2 206 -54 2589 215 111 31 chr20 11005283 11006462 -55661543 - L1ME2 LINE L1 -9 6155 4881 770 184 72 68 chr20 11006693 11006900 -55661105 - MER3 DNA MER1_type 0 209 2 311 317 48 0 chr20 11008139 11008243 -55659762 + MIR3 SINE MIR 94 202 -6 2011 157 0 7 chr20 11009340 11009645 -55658360 + AluJb SINE Alu 1 303 -9 295 232 131 0 chr20 11011307 11011406 -55656599 + Charlie8 DNA MER1_type 72 183 -2234 301 250 26 0 chr20 11011703 11011779 -55656226 - MIR SINE MIR -108 154 77 1856 156 48 23 chr20 11012373 11012770 -55655235 - L1MA5 LINE L1 0 6300 5894 1901 133 45 6 chr20 11012838 11013169 -55654836 - L1PB1 LINE L1 -38 6113 5770 * 4310 146 20 20 chr20 11013153 11013204 -55654801 - L1MA5 LINE L1 -406 5894 5844 3889 155 33 37 chr20 11013204 11013992 -55654013 - LTR1 LTR ERV1 0 785 1 4310 146 20 20 chr20 11013992 11015252 -55652753 - L1MA5 LINE L1 -456 5844 4589 24 0 0 0 chr20 11015864 11015888 -55652117 + AT_rich Low_complexity Low_complexity 1 24 0 231 186 0 0 chr20 11016148 11016191 -55651814 - L1MC/D LINE L1 -2535 5507 5465 425 191 32 0 chr20 11016557 11016651 -55651354 - LTR67 LTR ERVL -42 515 419 334 311 6 37 chr20 11016831 11016992 -55651013 - LTR67 LTR ERVL -400 157 2 355 305 128 0 chr20 11017339 11017542 -55650463 - ERVL LTR ERVL -384 5380 5152 252 0 0 0 chr20 11017566 11017594 -55650411 + (T)n Simple_repeat Simple_repeat 1 28 0 1194 306 93 25 chr20 11017804 11018531 -55649474 - ERVL LTR ERVL -875 4779 3986 1006 195 75 101 chr20 11018531 11018906 -55649099 + MLT1A1 LTR MaLR 1 365 0 1194 306 93 25 chr20 11018906 11019133 -55648872 - ERVL LTR ERVL -1668 3986 3776 833 365 60 8 chr20 11019407 11020154 -55647851 - ERVL LTR ERVL -2885 2879 2094 2174 83 73 7 chr20 11020458 11020747 -55647258 - AluSq SINE Alu -5 308 1 1028 137 108 10 chr20 11020779 11020983 -55647022 - MLT1B LTR MaLR 0 390 167 1671 142 37 17 chr20 11020985 11021281 -55646724 - MLT1B LTR MaLR -88 302 1 2346 99 3 0 chr20 11021808 11022111 -55645894 - AluSq SINE Alu -9 304 1 1747 182 0 10 chr20 11022124 11022415 -55645590 - AluJb SINE Alu -24 288 1 247 183 104 78 chr20 11023449 11023564 -55644441 - MIR SINE MIR -123 139 22 2184 112 17 0 chr20 11025968 11026255 -55641750 - AluSp SINE Alu -21 292 1 221 240 13 27 chr20 11027972 11028047 -55639958 + (TATATG)n Simple_repeat Simple_repeat 2 75 0 1652 189 3 18 chr20 11028717 11029003 -55639002 + AluJo SINE Alu 1 282 -30 4424 161 31 19 chr20 11029343 11030698 -55637307 - L1MB8 LINE L1 0 6178 4808 2346 93 7 0 chr20 11030698 11031008 -55636997 - AluSx SINE Alu 0 312 1 4424 161 31 19 chr20 11031008 11031088 -55636917 - L1MB8 LINE L1 -1370 4808 4730 1619 139 12 36 chr20 11032916 11033168 -55634837 + AluJo SINE Alu 1 246 -66 975 239 74 70 chr20 11034270 11034903 -55633102 - L1MC5 LINE L1 -6 7955 7320 260 267 114 69 chr20 11035816 11035964 -55632041 + MER5A DNA MER1_type 1 153 -25 180 200 0 0 chr20 11036762 11036797 -55631208 + L2 LINE L2 2241 2275 -1039 243 19 113 38 chr20 11036800 11036853 -55631152 + CT-rich Low_complexity Low_complexity 4 60 0 2308 109 0 25 chr20 11036853 11037173 -55630832 - AluSx SINE Alu 0 312 1 1060 212 74 59 chr20 11037473 11037865 -55630140 - MER93a LTR ERV1 0 402 5 712 290 142 35 chr20 11037994 11038902 -55629103 + L1ME4a LINE L1 3286 4290 -1856 * 2590 152 30 63 chr20 11038886 11040380 -55627625 + L1MA9 LINE L1 4745 6312 0 269 248 8 32 chr20 11040487 11040612 -55627393 + L1ME4a LINE L1 4465 4586 -1560 244 277 87 39 chr20 11040991 11041222 -55626783 + L1ME4a LINE L1 5880 6121 0 263 245 0 0 chr20 11041354 11041403 -55626602 + L2 LINE L2 3265 3313 0 2090 119 3 3 chr20 11041617 11041943 -55626062 - AluSx SINE Alu 0 326 1 486 296 125 19 chr20 11041966 11042166 -55625839 + L3b LINE CR1 1137 1363 -220 537 276 167 14 chr20 11042166 11042459 -55625546 + MER102b DNA MER1_type 2 339 -2 486 296 125 19 chr20 11042459 11042474 -55625531 + L3b LINE CR1 1363 1375 -208 2407 91 3 3 chr20 11043905 11044214 -55623791 - AluSc SINE Alu 0 309 1 1780 179 7 3 chr20 11044735 11045026 -55622979 + AluJo SINE Alu 1 292 -20 365 278 163 42 chr20 11045041 11045495 -55622510 + L1MC4 LINE L1 7525 8033 -9 1864 139 10 20 chr20 11047516 11047810 -55620195 - AluJo SINE Alu -21 291 1 998 263 226 5 chr20 11048797 11049174 -55618831 - L1ME3A LINE L1 -257 5913 5454 2083 118 18 0 chr20 11049566 11049846 -55618159 - AluSx SINE Alu -27 285 1 223 372 0 0 chr20 11049846 11049924 -55618081 - L2 LINE L2 -6 3307 3230 1343 146 158 23 chr20 11050719 11050979 -55617026 - AluJo SINE Alu -7 295 1 26 0 0 0 chr20 11051087 11051113 -55616892 + AT_rich Low_complexity Low_complexity 1 26 0 390 127 0 0 chr20 11053563 11053634 -55614371 + (TC)n Simple_repeat Simple_repeat 2 72 0 23 0 0 0 chr20 11056389 11056412 -55611593 + AT_rich Low_complexity Low_complexity 1 23 0 243 343 48 0 chr20 11056564 11056669 -55611336 - L2 LINE L2 -9 3263 3154 2454 68 0 29 chr20 11059666 11059976 -55608029 + AluY SINE Alu 1 301 -10 201 74 0 0 chr20 11060356 11060383 -55607622 + (GGA)n Simple_repeat Simple_repeat 2 28 0 227 209 113 17 chr20 11061734 11061849 -55606156 + MIR SINE MIR 21 146 -116 788 264 94 8 chr20 11062562 11062816 -55605189 - MLT1K LTR MaLR 0 588 313 306 305 25 8 chr20 11063039 11063157 -55604848 - MIR SINE MIR -102 160 41 25 0 0 28 chr20 11063832 11063843 -55604162 + AT_rich Low_complexity Low_complexity 1 11 -24 2007 115 21 0 chr20 11063843 11064122 -55603883 - AluSq SINE Alu -28 285 1 25 0 0 28 chr20 11064122 11064146 -55603859 + AT_rich Low_complexity Low_complexity 11 35 0 241 158 0 53 chr20 11066064 11066121 -55601884 + L2 LINE L2 1745 1798 -1516 977 216 86 27 chr20 11066121 11066422 -55601583 + MER33 DNA MER1_type 1 319 -5 1365 272 155 42 chr20 11066476 11066929 -55601076 + L2 LINE L2 1826 2226 -1087 1373 172 50 88 chr20 11066929 11067306 -55600699 - MLT1A1 LTR MaLR -2 363 1 1365 272 155 42 chr20 11067306 11067661 -55600344 + L2 LINE L2 2226 2539 -774 389 36 0 18 chr20 11067661 11067717 -55600288 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 1365 272 155 42 chr20 11067717 11068176 -55599829 + L2 LINE L2 2539 3223 -90 338 240 100 33 chr20 11068302 11068452 -55599553 - MER5A DNA MER1_type -23 166 7 426 294 37 7 chr20 11068523 11068659 -55599346 + MER5A DNA MER1_type 28 167 -22 2018 147 40 0 chr20 11068897 11069223 -55598782 - AluJo SINE Alu 0 338 1 357 125 0 0 chr20 11070460 11070516 -55597489 + (T)n Simple_repeat Simple_repeat 1 56 0 23 0 0 0 chr20 11070716 11070739 -55597266 + AT_rich Low_complexity Low_complexity 1 23 0 2475 61 0 7 chr20 11071840 11072137 -55595868 - AluY SINE Alu -16 295 1 279 234 372 0 chr20 11075118 11075255 -55592750 + MER5A DNA MER1_type 2 189 0 2417 55 3 61 chr20 11077289 11077615 -55590390 - AluY SINE Alu -4 307 1 318 263 21 31 chr20 11080021 11080147 -55587858 + MIR SINE MIR 19 144 -64 257 267 35 60 chr20 11080268 11080384 -55587621 - MER5B DNA MER1_type -65 113 1 258 95 0 0 chr20 11081440 11081482 -55586523 + (CA)n Simple_repeat Simple_repeat 2 43 0 2169 195 114 56 chr20 11083071 11083660 -55584345 - MLT1E3 LTR MaLR 0 624 2 343 254 95 32 chr20 11083851 11083977 -55584028 - MIR SINE MIR -110 152 19 244 286 0 0 chr20 11084015 11084078 -55583927 - MIR SINE MIR -191 71 9 535 298 22 17 chr20 11085343 11085524 -55582481 + MIR3 SINE MIR 17 198 -10 241 309 29 73 chr20 11087117 11087253 -55580752 - MER5A DNA MER1_type -1 188 59 23 54 0 0 chr20 11089269 11089306 -55578699 + AT_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr20 11090282 11090313 -55577692 + AT_rich Low_complexity Low_complexity 1 31 0 248 222 61 50 chr20 11093291 11093390 -55574615 + MLT1I LTR MaLR 47 146 -263 274 259 49 0 chr20 11093496 11093577 -55574428 + MLT1G1 LTR MaLR 493 577 -18 368 192 323 6 chr20 11093943 11094110 -55573895 - L1ME3A LINE L1 -8 6162 5943 1157 194 24 0 chr20 11094164 11094370 -55573635 - MER58A DNA MER1_type -8 216 6 924 135 65 18 chr20 11095235 11095405 -55572600 - MER5B DNA MER1_type 0 178 1 485 138 32 0 chr20 11095432 11095526 -55572479 + MER5A DNA MER1_type 10 106 -83 351 0 0 0 chr20 11095559 11095598 -55572407 + (CA)n Simple_repeat Simple_repeat 1 39 0 2147 78 3 72 chr20 11097804 11098124 -55569881 + AluSp SINE Alu 2 299 -14 716 185 143 42 chr20 11098765 11098954 -55569051 - MER3 DNA MER1_type -1 208 1 251 342 107 20 chr20 11102098 11102294 -55565711 - MIR SINE MIR -36 226 14 272 285 190 15 chr20 11102311 11102448 -55565557 + MER5B DNA MER1_type 1 161 -17 401 307 123 0 chr20 11106524 11106687 -55561318 - MER5A DNA MER1_type -1 188 6 385 206 23 6 chr20 11106700 11106795 -55561210 + MER5A DNA MER1_type 1 109 -80 207 0 0 0 chr20 11108155 11108178 -55559827 + (A)n Simple_repeat Simple_repeat 1 23 0 1552 168 54 7 chr20 11108365 11108662 -55559343 + AluJo SINE Alu 1 311 -1 1191 207 212 16 chr20 11109222 11109604 -55558401 - LTR16A1 LTR ERVL 0 457 1 409 327 125 11 chr20 11110419 11110691 -55557314 - L1ME3A LINE L1 -2252 5556 5254 252 0 0 0 chr20 11110842 11110870 -55557135 + (T)n Simple_repeat Simple_repeat 1 28 0 686 340 65 39 chr20 11112686 11113381 -55554624 - L2 LINE L2 -275 2997 2286 351 0 0 0 chr20 11115656 11115695 -55552310 + (CA)n Simple_repeat Simple_repeat 2 40 0 216 0 0 0 chr20 11119375 11119399 -55548606 + (A)n Simple_repeat Simple_repeat 1 24 0 369 0 0 0 chr20 11120830 11120871 -55547134 + (A)n Simple_repeat Simple_repeat 1 41 0 306 277 0 11 chr20 11124818 11124912 -55543093 + (CCG)n Simple_repeat Simple_repeat 3 95 0 2293 82 0 0 chr20 11127137 11127440 -55540565 + AluSc SINE Alu 1 303 -6 1017 197 56 66 chr20 11128470 11128790 -55539215 + L1ME2 LINE L1 5824 6140 -24 1803 138 28 7 chr20 11128967 11129258 -55538747 - AluSx SINE Alu -15 297 1 2325 61 13 16 chr20 11129499 11129810 -55538195 + AluSp SINE Alu 1 310 -3 975 277 107 84 chr20 11131742 11131957 -55536048 + L3 LINE CR1 873 1082 -495 2822 124 42 31 chr20 11131957 11132480 -55535525 - L1MB2 LINE L1 -1 6170 5642 2224 94 3 3 chr20 11132489 11132786 -55535219 - AluSg SINE Alu -13 297 1 975 277 107 84 chr20 11132786 11133217 -55534788 + L3 LINE CR1 1089 1544 -33 477 237 170 7 chr20 11133527 11133662 -55534343 + MER5A DNA MER1_type 26 182 -7 648 306 124 14 chr20 11134321 11134596 -55533409 + MLT1H LTR MaLR 232 536 -13 232 253 107 13 chr20 11135566 11135641 -55532364 + L2 LINE L2 3228 3309 -4 782 219 69 0 chr20 11135902 11136062 -55531943 - MER5A DNA MER1_type -18 171 1 440 219 76 17 chr20 11136289 11136408 -55531597 - MIR SINE MIR -30 232 107 415 252 189 8 chr20 11136593 11136720 -55531285 - MER5A DNA MER1_type -6 183 34 1863 235 86 29 chr20 11137186 11137770 -55530235 - L1ME2 LINE L1 -20 6144 5528 876 168 74 7 chr20 11139267 11139416 -55528589 - MER5B DNA MER1_type -10 168 10 849 220 13 93 chr20 11139763 11140004 -55528001 + MIR SINE MIR 21 251 -11 656 242 38 27 chr20 11140996 11141182 -55526823 - MER5A DNA MER1_type -1 188 1 21 36 0 0 chr20 11141488 11141516 -55526489 + AT_rich Low_complexity Low_complexity 1 28 0 180 0 0 0 chr20 11142212 11142232 -55525773 + (T)n Simple_repeat Simple_repeat 1 20 0 2305 99 0 0 chr20 11142987 11143299 -55524706 - AluSx SINE Alu 0 312 1 279 328 16 0 chr20 11144799 11144921 -55523084 - L1ME LINE L1 -508 5654 5531 544 324 79 16 chr20 11145052 11145306 -55522699 - L1ME LINE L1 -765 5381 5102 234 91 0 0 chr20 11145306 11145339 -55522666 + (TG)n Simple_repeat Simple_repeat 2 34 0 544 324 79 16 chr20 11145339 11145402 -55522603 - L1ME LINE L1 -1044 5102 5044 474 292 64 60 chr20 11145555 11145728 -55522277 - L1ME LINE L1 -1301 4845 4674 1935 146 3 0 chr20 11145728 11146030 -55521975 - AluSx SINE Alu -9 303 1 474 292 64 60 chr20 11146030 11146308 -55521697 - L1ME LINE L1 -1472 4674 4392 1282 244 234 25 chr20 11147957 11148589 -55519416 + LTR50 LTR ERVL 3 766 -29 932 192 10 61 chr20 11148605 11148725 -55519280 - MER5A DNA MER1_type -1 188 80 1671 148 30 27 chr20 11148725 11149022 -55518983 - AluJo SINE Alu -14 298 1 932 192 10 61 chr20 11149022 11149099 -55518906 - MER5A DNA MER1_type -109 80 1 1748 228 85 56 chr20 11149854 11150421 -55517584 - MLT1G1 LTR MaLR -12 583 1 937 261 40 4 chr20 11151404 11151676 -55516329 + LTR16A1 LTR ERVL 176 457 0 573 219 18 44 chr20 11151819 11152047 -55515958 + LTR56-int LTR ERV1 4572 4793 -330 2507 116 21 25 chr20 11152156 11152195 -55515810 + LTR56 LTR ERV1 2 40 -405 1850 155 7 14 chr20 11152195 11152485 -55515520 - AluSx SINE Alu -24 288 1 2507 116 21 25 chr20 11152485 11152878 -55515127 + LTR56 LTR ERV1 40 432 -13 635 236 152 0 chr20 11152990 11153168 -55514837 + MER3 DNA MER1_type 1 205 -4 851 151 138 26 chr20 11153173 11153405 -55514600 + L1MC4 LINE L1 7737 7994 -48 237 157 0 0 chr20 11153490 11153541 -55514464 + HAL1 LINE L1 2312 2362 -145 1338 215 58 67 chr20 11153566 11154102 -55513903 + MLT1H LTR MaLR 19 549 0 288 340 78 42 chr20 11154173 11154364 -55513641 + MIR SINE MIR 52 249 -13 1276 138 9 9 chr20 11154536 11154761 -55513244 + MSTA LTR MaLR 6 230 -198 1300 54 0 22 chr20 11154762 11154946 -55513059 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 354 138 0 0 chr20 11154946 11155004 -55513001 + (TC)n Simple_repeat Simple_repeat 1 58 0 1758 144 7 4 chr20 11155004 11155274 -55512731 - AluSx SINE Alu -1 311 41 1537 79 9 0 chr20 11155276 11155490 -55512515 + MSTA LTR MaLR 212 427 -1 422 286 191 24 chr20 11155823 11156117 -55511888 - MLT1J1 LTR MaLR -8 438 96 669 176 0 8 chr20 11156137 11156268 -55511737 - L1MB3 LINE L1 -10 6173 6044 1514 154 0 4 chr20 11156269 11156542 -55511463 - L1MB3 LINE L1 -230 5953 5682 228 224 90 0 chr20 11156543 11156610 -55511395 - MLT1J1 LTR MaLR -371 75 3 423 356 21 13 chr20 11156642 11156956 -55511049 - Charlie8 DNA MER1_type -2146 271 9 198 283 87 43 chr20 11157677 11157769 -55510236 - L2 LINE L2 -40 3232 3137 24 0 0 0 chr20 11158796 11158820 -55509185 + AT_rich Low_complexity Low_complexity 1 24 0 1882 178 0 7 chr20 11160618 11160927 -55507078 - AluJb SINE Alu -5 307 1 356 209 72 58 chr20 11161111 11161250 -55506755 - L1MC5 LINE L1 -191 7770 7630 2031 166 0 3 chr20 11161286 11161599 -55506406 + AluSx SINE Alu 1 312 0 24 32 0 0 chr20 11161764 11161795 -55506210 + AT_rich Low_complexity Low_complexity 1 31 0 470 194 0 43 chr20 11162283 11162520 -55505485 + (TG)n Simple_repeat Simple_repeat 1 226 0 1448 110 14 23 chr20 11163934 11164152 -55503853 - AluSg/x SINE Alu -1 311 96 272 206 44 0 chr20 11164499 11164567 -55503438 - MLT1H LTR MaLR 0 549 479 928 309 50 10 chr20 11164686 11164984 -55503021 - MLT1H LTR MaLR -196 353 44 228 287 163 47 chr20 11165114 11165243 -55502762 + MER5A DNA MER1_type 7 150 -39 250 326 27 54 chr20 11166352 11166499 -55501506 + MIR3 SINE MIR 5 147 -61 567 170 0 9 chr20 11166570 11166682 -55501323 + MER3 DNA MER1_type 57 167 -42 1260 158 42 19 chr20 11166688 11166998 -55501007 + MER3 DNA MER1_type 2239 2555 0 359 331 0 73 chr20 11167148 11167284 -55500721 + L2 LINE L2 3143 3268 -4 24 32 0 0 chr20 11167286 11167317 -55500688 + AT_rich Low_complexity Low_complexity 1 31 0 237 281 37 12 chr20 11167332 11167414 -55500591 + MIR3 SINE MIR 114 197 -11 1109 259 134 34 chr20 11168683 11168762 -55499243 + L1MC4 LINE L1 7187 7257 -785 2133 136 0 0 chr20 11168762 11169064 -55498941 + AluSx SINE Alu 1 302 -10 1109 259 134 34 chr20 11169064 11169632 -55498373 + L1MC4 LINE L1 7257 7899 -143 25 51 0 0 chr20 11169712 11169751 -55498254 + AT_rich Low_complexity Low_complexity 1 39 0 408 20 0 0 chr20 11170788 11170837 -55497168 + (CA)n Simple_repeat Simple_repeat 2 50 0 366 286 216 17 chr20 11172590 11172821 -55495184 - L3b LINE CR1 -128 1455 1179 198 237 0 0 chr20 11174502 11174540 -55493465 - L2 LINE L2 -14 3299 3262 712 299 103 0 chr20 11174968 11175182 -55492823 - MIR SINE MIR 0 262 27 426 256 61 72 chr20 11176059 11176239 -55491766 - MER5A DNA MER1_type -1 188 11 267 297 79 0 chr20 11176244 11176345 -55491660 - MIR SINE MIR -118 144 36 258 32 0 0 chr20 11176423 11176454 -55491551 + (TG)n Simple_repeat Simple_repeat 1 31 0 200 281 45 34 chr20 11177159 11177248 -55490757 - MIR SINE MIR -61 201 112 2640 95 14 0 chr20 11177665 11178024 -55489981 + THE1B LTR MaLR 1 364 0 215 310 40 80 chr20 11178106 11178306 -55489699 - L2 LINE L2 -893 2421 2230 182 341 158 31 chr20 11178583 11178932 -55489073 + L2 LINE L2 2308 2700 -614 527 312 32 0 chr20 11181098 11181255 -55486750 + MIR SINE MIR 3 164 -98 256 196 20 0 chr20 11181526 11181577 -55486428 - MLT1I LTR MaLR -277 132 81 196 203 0 102 chr20 11181630 11181689 -55486316 + MIR SINE MIR 148 200 -62 903 88 16 39 chr20 11182110 11182292 -55485713 + (TTCCC)n Simple_repeat Simple_repeat 3 180 0 218 292 31 0 chr20 11182293 11182358 -55485647 + CT-rich Low_complexity Low_complexity 3 69 0 722 308 54 0 chr20 11182555 11182831 -55485174 - LTR16A LTR ERVL -159 291 1 2330 108 3 16 chr20 11183281 11183597 -55484408 - AluSx SINE Alu 0 312 1 336 362 40 7 chr20 11183612 11183764 -55484241 - MIR3 SINE MIR -3 205 49 2149 121 0 25 chr20 11183853 11184168 -55483837 + AluSx SINE Alu 2 308 -4 496 274 110 0 chr20 11184172 11184336 -55483669 + MIR SINE MIR 34 215 -47 1047 179 37 172 chr20 11184492 11184957 -55483048 - MLT1H LTR MaLR -146 403 2 385 360 80 6 chr20 11185166 11185341 -55482664 - MIR3 SINE MIR -5 203 16 584 269 154 0 chr20 11185633 11185789 -55482216 - MER5A DNA MER1_type -1 188 9 772 194 51 0 chr20 11185808 11185983 -55482022 + MER3 DNA MER1_type 6 189 -20 838 272 71 5 chr20 11186147 11186371 -55481634 + MIR SINE MIR 3 241 -21 412 98 0 0 chr20 11188507 11188568 -55479437 - Alu SINE Alu -7 304 244 326 255 51 32 chr20 11188576 11188594 -55479411 - L1MA10 LINE L1 0 6334 6317 2803 203 10 15 chr20 11188594 11189211 -55478794 - L1ME2 LINE L1 -10 6154 5541 1614 224 66 2 chr20 11189455 11189987 -55478018 + L1M4 LINE L1 4015 4580 -1566 852 249 21 0 chr20 11189987 11190176 -55477829 - MER58A DNA MER1_type 0 224 32 183 301 97 0 chr20 11190331 11190424 -55477581 + MIR SINE MIR 126 227 -35 1536 225 47 21 chr20 11192690 11193161 -55474844 + Charlie4a DNA MER1_type 25 507 -1 186 262 0 0 chr20 11193161 11193203 -55474802 - MIR3 SINE MIR -49 159 118 208 323 0 32 chr20 11193954 11194016 -55473989 - L3 LINE CR1 -2 1575 1516 2599 226 35 4 chr20 11194121 11194799 -55473206 - L1MC4a LINE L1 -1 7807 7109 1432 147 9 5 chr20 11195561 11195785 -55472220 + AluSx SINE Alu 1 225 -87 213 39 0 0 chr20 11195800 11195826 -55472179 + (A)n Simple_repeat Simple_repeat 1 26 0 436 285 34 82 chr20 11196142 11196433 -55471572 + L3 LINE CR1 599 875 -702 231 170 0 0 chr20 11196668 11196715 -55471290 + A-rich Low_complexity Low_complexity 1 47 0 3018 178 59 27 chr20 11197150 11197857 -55470148 + L1MA9 LINE L1 5545 6274 -38 285 247 10 41 chr20 11198902 11198999 -55469006 - L2 LINE L2 0 3313 3220 1649 131 0 0 chr20 11199389 11199663 -55468342 - L1MA5 LINE L1 -2 6298 6025 257 342 13 0 chr20 11200567 11200643 -55467362 + MIR SINE MIR 186 262 0 2161 227 60 59 chr20 11201540 11202074 -55465931 + L1ME3A LINE L1 5431 5963 -207 1922 133 4 0 chr20 11202074 11202345 -55465660 + AluSq SINE Alu 1 272 -41 2161 227 60 59 chr20 11202345 11202357 -55465648 + L1ME3A LINE L1 5963 5973 -197 351 0 0 0 chr20 11202357 11202396 -55465609 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 2161 227 60 59 chr20 11202396 11202583 -55465422 + L1ME3A LINE L1 5973 6165 -5 464 275 95 11 chr20 11202931 11203120 -55464885 - MIR SINE MIR -32 230 26 273 243 40 0 chr20 11203842 11203916 -55464089 - MIR SINE MIR -123 139 63 1464 219 36 15 chr20 11203933 11204266 -55463739 - MER58B DNA MER1_type 0 341 2 306 206 0 0 chr20 11204460 11204528 -55463477 + GA-rich Low_complexity Low_complexity 1 68 0 607 266 83 87 chr20 11207707 11207818 -55460187 - LTR33 LTR ERVL 0 521 411 2120 113 3 0 chr20 11207818 11208133 -55459872 + AluSx SINE Alu 1 316 0 607 266 83 87 chr20 11208133 11208527 -55459478 - LTR33 LTR ERVL -110 411 17 2406 80 0 0 chr20 11208931 11209219 -55458786 + AluSg SINE Alu 1 288 -22 2232 227 18 4 chr20 11209636 11210086 -55457919 + LTR16C LTR ERVL 36 491 0 317 251 77 115 chr20 11210275 11210640 -55457365 - L1ME4a LINE L1 -104 6017 5665 2120 129 10 0 chr20 11210709 11211019 -55456986 + AluSq SINE Alu 1 313 0 2241 109 3 0 chr20 11211342 11211645 -55456360 + AluSq SINE Alu 1 304 -9 633 245 88 60 chr20 11211833 11212162 -55455843 - L1ME4a LINE L1 -590 5576 5284 363 289 164 13 chr20 11212946 11213098 -55454907 + MIR3 SINE MIR 10 184 -24 401 198 75 56 chr20 11213901 11214048 -55453957 - L1MD3 LINE L1 -4 8038 7901 242 232 0 0 chr20 11214048 11214104 -55453901 + L1MC4 LINE L1 6648 6703 -1339 250 115 19 0 chr20 11214128 11214180 -55453825 + LTR66 LTR ERVL 394 446 -164 1560 179 105 30 chr20 11214183 11214546 -55453459 - L1MC4 LINE L1 -151 7891 7502 539 328 124 47 chr20 11216009 11216452 -55451553 - L2 LINE L2 -193 3079 2671 2133 133 6 35 chr20 11216452 11216799 -55451206 + MER1B DNA MER1_type 1 337 0 539 328 124 47 chr20 11216799 11216997 -55451008 - L2 LINE L2 -601 2671 2490 2364 75 13 41 chr20 11216997 11217315 -55450690 + AluY SINE Alu 1 309 -2 2335 94 0 3 chr20 11217325 11217622 -55450383 + AluSg SINE Alu 3 298 -12 539 328 124 47 chr20 11217622 11217764 -55450241 - L2 LINE L2 -790 2482 2352 1783 168 25 0 chr20 11217764 11218050 -55449955 + AluJo SINE Alu 1 293 -19 539 328 124 47 chr20 11218050 11218289 -55449716 - L2 LINE L2 -920 2352 1978 800 256 118 44 chr20 11218873 11219279 -55448726 - L1MC4a LINE L1 -1778 6030 5595 309 325 170 10 chr20 11220320 11220514 -55447491 + MIR SINE MIR 37 261 -1 735 203 31 78 chr20 11220735 11220927 -55447078 + MER5A DNA MER1_type 7 189 0 280 278 14 0 chr20 11221509 11221581 -55446424 - MER116 DNA Mariner -5 75 3 333 327 46 0 chr20 11221696 11221849 -55446156 + MIR SINE MIR 66 225 -37 194 79 0 26 chr20 11223479 11223517 -55444488 + (CAAAAA)n Simple_repeat Simple_repeat 3 39 0 370 192 154 58 chr20 11224363 11224416 -55443589 + MIR SINE MIR 37 84 -178 2458 181 43 0 chr20 11224416 11224830 -55443175 + MSTB1 LTR MaLR 1 432 0 370 192 154 58 chr20 11224830 11224880 -55443125 + MIR SINE MIR 84 150 -112 230 33 0 0 chr20 11224885 11224915 -55443090 + L1M3d LINE L1 1 30 -5861 * 1497 218 194 17 chr20 11224889 11225307 -55442698 + L1MA9 LINE L1 1 492 -6538 * 7085 167 39 25 chr20 11225299 11225567 -55442438 + L1MA9 LINE L1 4695 4958 -2314 847 179 0 21 chr20 11225567 11225712 -55442293 + FLAM_C SINE Alu 2 143 0 7085 167 39 25 chr20 11225712 11225955 -55442050 + L1MA9 LINE L1 4958 5196 -2076 1357 233 37 3 chr20 11225955 11226251 -55441754 - AluJo SINE Alu -6 306 1 7085 167 39 25 chr20 11226251 11228121 -55439884 + L1MA9 LINE L1 5196 7129 -143 306 0 0 0 chr20 11228121 11228155 -55439850 + (CA)n Simple_repeat Simple_repeat 1 34 0 7085 167 39 25 chr20 11228155 11228302 -55439703 + L1MA9 LINE L1 7129 7272 0 862 241 159 40 chr20 11228908 11229260 -55438745 - LTR16C LTR ERVL -1 490 97 211 158 26 0 chr20 11229481 11229519 -55438486 + CT-rich Low_complexity Low_complexity 2 40 0 297 297 44 0 chr20 11230316 11230407 -55437598 + L2 LINE L2 3214 3308 -5 200 200 0 0 chr20 11232045 11232080 -55435925 + T-rich Low_complexity Low_complexity 3 37 0 887 255 45 15 chr20 11232854 11233121 -55434884 + LTR16C LTR ERVL 209 483 -8 1393 272 69 14 chr20 11233213 11233636 -55434369 - LTR16C LTR ERVL -3 488 43 424 343 24 12 chr20 11233929 11234095 -55433910 + MIR3 SINE MIR 23 190 -18 297 311 89 7 chr20 11234198 11234333 -55433672 - MIR3 SINE MIR -11 197 52 186 167 0 0 chr20 11234359 11234395 -55433610 + CT-rich Low_complexity Low_complexity 1 36 0 1502 156 9 67 chr20 11234395 11234722 -55433283 - AluJb SINE Alu -2 310 3 2759 157 15 18 chr20 11235073 11235531 -55432474 - MER66B LTR ERV1 -29 457 1 443 287 76 32 chr20 11235965 11236122 -55431883 + MER5A DNA MER1_type 26 189 0 1619 203 10 0 chr20 11236651 11236952 -55431053 - AluJo SINE Alu -6 306 3 318 254 64 0 chr20 11237798 11237908 -55430097 - MER113 DNA MER1_type? -312 209 93 245 264 153 0 chr20 11238844 11238916 -55429089 + L2 LINE L2 3230 3312 -1 461 318 31 64 chr20 11239180 11239507 -55428498 - LTR16C LTR ERVL -38 453 138 396 0 0 0 chr20 11239890 11239934 -55428071 + (TG)n Simple_repeat Simple_repeat 1 44 0 1248 236 89 43 chr20 11240079 11240558 -55427447 - MLT1H LTR MaLR 0 547 1 1080 285 55 50 chr20 11240558 11240995 -55427010 - MLT1J2 LTR MaLR -11 439 1 925 183 124 0 chr20 11241947 11242133 -55425872 + MER3 DNA MER1_type 1 209 0 604 221 74 25 chr20 11242416 11242579 -55425426 - MER69A DNA AcHobo -4 173 3 389 273 105 7 chr20 11242607 11242750 -55425255 + MIR SINE MIR 48 204 -58 2002 167 52 3 chr20 11242862 11243210 -55424795 - MLT1A1 LTR MaLR 0 365 1 573 231 121 6 chr20 11243216 11243389 -55424616 - MIR SINE MIR -27 235 43 239 231 26 39 chr20 11243753 11243831 -55424174 + MER5A DNA MER1_type 44 120 -69 2493 120 28 11 chr20 11244027 11244385 -55423620 + THE1B LTR MaLR 1 364 0 198 277 23 0 chr20 11245525 11245655 -55422350 + CT-rich Low_complexity Low_complexity 2 134 0 508 238 0 0 chr20 11245715 11245816 -55422189 - L1PB4 LINE L1 -7 6149 6049 234 0 0 0 chr20 11245959 11245985 -55422020 + (CA)n Simple_repeat Simple_repeat 2 27 0 1866 143 3 14 chr20 11247793 11248086 -55419919 - AluSx SINE Alu -22 290 1 3568 204 35 74 chr20 11248414 11249002 -55419003 - L1ME2 LINE L1 -8 6156 5635 3910 53 0 0 chr20 11249002 11249453 -55418552 - L1PA6 LINE L1 -1 6153 5703 3568 204 35 74 chr20 11249453 11250038 -55417967 - L1ME2 LINE L1 -529 5635 5028 289 305 0 0 chr20 11250086 11250181 -55417824 + (CCAA)n Simple_repeat Simple_repeat 4 98 0 219 293 32 81 chr20 11251124 11251247 -55416758 - MIR SINE MIR -62 146 30 1614 206 16 39 chr20 11253523 11253959 -55414046 - MLT1C LTR MaLR 0 467 42 252 130 0 0 chr20 11253989 11254035 -55413970 + (TA)n Simple_repeat Simple_repeat 2 47 0 346 214 0 82 chr20 11254045 11254143 -55413862 - L1MC4 LINE L1 -1339 6703 6614 201 210 0 0 chr20 11254149 11254211 -55413794 + (TA)n Simple_repeat Simple_repeat 2 63 0 948 317 22 16 chr20 11254637 11255153 -55412852 + L2 LINE L2 2520 3036 -277 1308 218 30 70 chr20 11255307 11255330 -55412675 + Charlie4a DNA MER1_type 25 47 -1914 1059 244 88 65 chr20 11255330 11255821 -55412184 + MLT1D LTR MaLR 4 505 0 1308 218 30 70 chr20 11255821 11256256 -55411749 + Charlie4a DNA MER1_type 47 465 -43 329 0 24 0 chr20 11256301 11256342 -55411663 + (GAAA)n Simple_repeat Simple_repeat 3 44 0 241 314 157 0 chr20 11256356 11256458 -55411547 - MIR3 SINE MIR -49 159 42 185 174 0 43 chr20 11256814 11256860 -55411145 + L2 LINE L2 3270 3313 0 213 39 0 0 chr20 11258128 11258154 -55409851 + (A)n Simple_repeat Simple_repeat 1 26 0 243 0 0 0 chr20 11258656 11258683 -55409322 + (T)n Simple_repeat Simple_repeat 1 27 0 1198 248 122 20 chr20 11258715 11259166 -55408839 - LTR33 LTR ERVL -4 517 21 2247 49 0 0 chr20 11259452 11259718 -55408287 + AluY SINE Alu 1 266 -45 828 261 123 21 chr20 11259726 11260101 -55407904 + LTR33 LTR ERVL 105 517 -4 249 329 13 0 chr20 11260745 11260824 -55407181 - MIR3 SINE MIR -19 189 110 252 360 53 11 chr20 11260838 11261027 -55406978 - MER117 DNA MER1_type 0 197 1 852 142 7 7 chr20 11261436 11261591 -55406414 - LTR32 LTR ERVL 0 471 317 1878 177 24 0 chr20 11261637 11261971 -55406034 - LTR32 LTR ERVL -122 349 8 461 145 0 0 chr20 11262160 11262236 -55405769 + MER116 DNA Mariner 5 80 0 553 235 0 0 chr20 11262424 11262539 -55405466 + FLAM_A SINE Alu 1 115 -18 216 196 36 18 chr20 11262633 11262689 -55405316 - MER91C DNA MER1_type -30 110 54 242 337 69 0 chr20 11263077 11263178 -55404827 + MIR SINE MIR 36 143 -65 227 336 109 14 chr20 11263526 11263746 -55404259 + LTR16A1 LTR ERVL 209 449 -8 774 324 66 38 chr20 11265420 11265917 -55402088 - L1ME4a LINE L1 -97 6024 5514 216 143 0 0 chr20 11266741 11266783 -55401222 + (TG)n Simple_repeat Simple_repeat 1 42 0 438 302 22 17 chr20 11266793 11266972 -55401033 - LTR16C LTR ERVL -6 485 306 786 291 131 24 chr20 11267476 11267851 -55400154 + MLT1K LTR MaLR 159 573 -15 256 211 0 0 chr20 11267909 11267961 -55400044 - L2 LINE L2 -1 3312 3261 373 298 115 54 chr20 11268371 11268666 -55399339 - MLT1H LTR MaLR -107 442 130 509 315 91 14 chr20 11269408 11269627 -55398378 + MIR SINE MIR 15 250 -12 2364 119 22 11 chr20 11269697 11270057 -55397948 - THE1B LTR MaLR 0 364 1 2353 57 0 0 chr20 11270352 11270670 -55397335 - L1P LINE L1 -3041 3105 2788 378 37 0 0 chr20 11270665 11270719 -55397286 - L1P LINE L1 -2781 3365 3312 * 16048 84 8 0 chr20 11270719 11273748 -55394257 + L1PA7 LINE L1 3119 6151 -3 678 282 11 0 chr20 11273911 11274085 -55393920 - MER5B DNA MER1_type 0 178 3 771 275 108 3 chr20 11274897 11275192 -55392813 + MLT1J2 LTR MaLR 3 328 -122 549 238 144 0 chr20 11275386 11275567 -55392438 + LTR16A1 LTR ERVL 246 452 -5 218 266 31 16 chr20 11275576 11275640 -55392365 + L2 LINE L2 3188 3252 -61 819 195 87 0 chr20 11278114 11278299 -55389706 + MER3 DNA MER1_type 5 205 -4 731 241 47 56 chr20 11278369 11278578 -55389427 + MIR SINE MIR 1 209 -53 2280 95 3 0 chr20 11278578 11278873 -55389132 + AluSp SINE Alu 1 296 -17 731 241 47 56 chr20 11278873 11278895 -55389110 + MIR SINE MIR 209 230 -32 270 342 123 0 chr20 11279079 11279193 -55388812 - L2 LINE L2 -4 3268 3141 1214 226 56 46 chr20 11279194 11279584 -55388421 + MLT1H LTR MaLR 1 394 -155 302 224 224 17 chr20 11279736 11279852 -55388153 - L2 LINE L2 -219 3053 2914 1111 276 80 17 chr20 11281573 11282034 -55385971 + L1MC/D LINE L1 5291 5780 -2028 715 206 39 54 chr20 11282862 11283066 -55384939 + MER63A DNA MER1_type 3 203 -7 562 272 0 8 chr20 11283196 11283321 -55384684 + MER5A DNA MER1_type 65 188 -1 222 274 65 0 chr20 11283965 11284027 -55383978 - MIR SINE MIR -111 151 86 274 305 74 11 chr20 11284274 11284369 -55383636 + MIR SINE MIR 13 113 -149 1054 243 61 23 chr20 11284373 11284715 -55383290 - LTR16A1 LTR ERVL 0 457 103 335 284 71 16 chr20 11284822 11284949 -55383056 + MIR SINE MIR 119 252 -10 1250 301 65 24 chr20 11285088 11285985 -55382020 - L2 LINE L2 -2 3311 2379 1938 123 0 27 chr20 11287253 11287576 -55380429 - AluSx SINE Alu 0 315 1 786 168 6 39 chr20 11288083 11288262 -55379743 + MER3 DNA MER1_type 21 193 -16 194 245 0 38 chr20 11288591 11288644 -55379361 + L2 LINE L2 3263 3313 0 240 193 0 114 chr20 11288680 11288768 -55379237 - MLT1H LTR MaLR 0 549 472 406 261 58 43 chr20 11288919 11289107 -55378898 - MLT1H LTR MaLR -358 191 1 1718 175 102 89 chr20 11289633 11290204 -55377801 - L1ME1 LINE L1 -21 6145 5568 1313 271 42 35 chr20 11290650 11291081 -55376924 + LTR16C LTR ERVL 57 490 -1 652 305 64 24 chr20 11291859 11292108 -55375897 - MIR SINE MIR 0 262 4 264 335 151 20 chr20 11292108 11292352 -55375653 - L3 LINE CR1 -109 1468 1192 1153 276 63 24 chr20 11292492 11293122 -55374883 + L1MEc LINE L1 1745 2399 -3997 357 239 0 37 chr20 11295579 11295742 -55372263 + (CATA)n Simple_repeat Simple_repeat 1 157 0 295 322 0 8 chr20 11295773 11295891 -55372114 + (TG)n Simple_repeat Simple_repeat 2 118 0 256 201 14 36 chr20 11295940 11296079 -55371926 + (CATATA)n Simple_repeat Simple_repeat 6 141 0 1912 141 17 3 chr20 11296582 11296880 -55371125 + AluSx SINE Alu 1 302 -10 500 268 83 30 chr20 11296966 11297338 -55370667 - L1MC/D LINE L1 -396 5771 5427 425 316 65 29 chr20 11297491 11297766 -55370239 - L1MC/D LINE L1 -2358 3788 3504 4678 169 28 1 chr20 11297961 11298845 -55369160 + L1MB7 LINE L1 5259 6166 -18 325 283 180 48 chr20 11298870 11299142 -55368863 - L3 LINE CR1 -8 1569 1262 301 264 314 31 chr20 11299751 11299897 -55368108 + MIR SINE MIR 1 197 -65 183 80 0 0 chr20 11299897 11299922 -55368083 + (CA)n Simple_repeat Simple_repeat 1 25 0 301 264 314 31 chr20 11299922 11299934 -55368071 + MIR SINE MIR 197 204 -58 231 287 115 57 chr20 11300562 11300684 -55367321 - L2 LINE L2 0 3313 3185 182 302 60 115 chr20 11300697 11300879 -55367126 - L2 LINE L2 -841 2473 2302 1350 162 73 31 chr20 11300897 11301181 -55366824 - Charlie5 DNA MER1_type 0 2624 2318 912 51 5 185 chr20 11301181 11301376 -55366629 + L1MA2 LINE L1 6145 6304 0 1350 162 73 31 chr20 11301376 11301474 -55366531 - Charlie5 DNA MER1_type -306 2318 2226 537 146 0 19 chr20 11301468 11301571 -55366434 - MER3 DNA MER1_type -44 165 65 * 209 280 180 0 chr20 11301586 11301686 -55366319 - L2 LINE L2 -1044 2270 2153 342 115 0 0 chr20 11303043 11303095 -55364910 + (TTCA)n Simple_repeat Simple_repeat 4 55 0 554 307 105 40 chr20 11303116 11303344 -55364661 - MIR SINE MIR -8 254 12 524 306 52 48 chr20 11303350 11303660 -55364345 - L2 LINE L2 -80 3233 2923 274 272 160 18 chr20 11303663 11303832 -55364173 + LTR16A1 LTR ERVL 3 195 -262 468 287 58 17 chr20 11303865 11304039 -55363966 + LTR16A1 LTR ERVL 277 457 0 707 325 79 12 chr20 11304041 11304443 -55363562 - L2 LINE L2 -349 2924 2489 669 186 8 8 chr20 11304553 11304671 -55363334 - FLAM_C SINE Alu -17 126 9 300 111 0 0 chr20 11305377 11305422 -55362583 + (T)n Simple_repeat Simple_repeat 1 45 0 1146 168 0 0 chr20 11306603 11306811 -55361194 - L1 LINE L1 -1147 4999 4792 1694 135 10 3 chr20 11306859 11307155 -55360850 + L1 LINE L1 4457 4754 -1392 292 327 33 42 chr20 11307446 11307660 -55360345 - L2 LINE L2 -1759 1555 1344 852 219 17 22 chr20 11308546 11308724 -55359281 - MER45A DNA AcHobo -1 177 1 1725 128 58 0 chr20 11309091 11309349 -55358656 - AluSx SINE Alu -26 286 14 244 105 0 0 chr20 11309361 11309399 -55358606 - Alu SINE Alu -252 51 14 979 57 0 0 chr20 11310348 11310470 -55357535 - L1PA7 LINE L1 -5 6149 6028 1572 103 9 18 chr20 11310490 11310714 -55357291 - AluSc SINE Alu -7 302 81 673 232 54 21 chr20 11310714 11310955 -55357050 - L1ME2 LINE L1 -264 5900 5652 2901 264 96 10 chr20 11310957 11311888 -55356117 + L2 LINE L2 2043 3052 -261 2528 72 27 0 chr20 11311891 11312226 -55355779 + L1PA10 LINE L1 5821 6164 -4 348 271 62 69 chr20 11312587 11312731 -55355274 + MIR SINE MIR 66 208 -54 203 325 72 0 chr20 11314116 11314199 -55353806 + L3b LINE CR1 1407 1495 -88 639 294 92 27 chr20 11314391 11314728 -55353277 + LTR16C LTR ERVL 133 491 0 648 265 109 17 chr20 11314809 11314861 -55353144 - MIR SINE MIR -10 252 206 192 40 0 0 chr20 11314861 11314886 -55353119 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 299 96 19 0 chr20 11314885 11314937 -55353068 + (TA)n Simple_repeat Simple_repeat 2 54 0 648 265 109 17 chr20 11314886 11315114 -55352891 - MIR SINE MIR -56 206 2 314 360 53 26 chr20 11316944 11317172 -55350833 - L2 LINE L2 -227 3045 2812 1347 254 15 0 chr20 11317324 11317654 -55350351 - LTR16C LTR ERVL 0 491 157 381 207 0 0 chr20 11318596 11318683 -55349322 + (TCCA)n Simple_repeat Simple_repeat 3 89 0 180 205 301 0 chr20 11318683 11318766 -55349239 - L3b LINE CR1 -188 1395 1288 397 220 105 24 chr20 11318987 11319196 -55348809 + L1MC4a LINE L1 4619 4844 -1302 337 298 116 29 chr20 11319386 11319628 -55348377 + L1MC4a LINE L1 5106 5368 -778 435 229 36 21 chr20 11319654 11319794 -55348211 + L1MC4a LINE L1 5409 5550 -2258 460 231 93 0 chr20 11319797 11319905 -55348100 + MER58B DNA MER1_type 1 118 -223 360 94 0 0 chr20 11319905 11319958 -55348047 + (TATTG)n Simple_repeat Simple_repeat 3 55 0 630 204 13 13 chr20 11319959 11320116 -55347889 + L1MA9 LINE L1 6113 6269 -43 899 204 43 0 chr20 11320116 11320327 -55347678 + MER58B DNA MER1_type 109 328 -13 655 243 104 43 chr20 11320347 11320721 -55347284 + L1MC4a LINE L1 5574 5970 -1838 256 306 63 0 chr20 11320999 11321110 -55346895 + L2 LINE L2 3118 3235 -78 292 250 115 8 chr20 11321423 11321620 -55346385 + L1MC4a LINE L1 5692 5752 -432 22 0 0 0 chr20 11322112 11322134 -55345871 + AT_rich Low_complexity Low_complexity 1 22 0 255 93 0 0 chr20 11322497 11322540 -55345465 + (TG)n Simple_repeat Simple_repeat 2 44 0 598 216 157 0 chr20 11322720 11322873 -55345132 - MER5A DNA MER1_type 0 189 13 184 281 18 0 chr20 11322903 11322960 -55345045 - MIR SINE MIR -131 77 20 273 355 60 30 chr20 11323022 11323053 -55344952 - MER5A DNA MER1_type -18 171 142 1620 173 61 4 chr20 11323053 11323211 -55344794 - AluJo SINE Alu -17 295 113 279 0 0 0 chr20 11323211 11323242 -55344763 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1620 173 61 4 chr20 11323242 11323360 -55344645 - AluJo SINE Alu -199 113 3 273 355 60 30 chr20 11323360 11323494 -55344511 - MER5A DNA MER1_type -47 142 1 27 0 0 0 chr20 11323907 11323934 -55344071 + AT_rich Low_complexity Low_complexity 1 27 0 260 172 23 35 chr20 11325165 11325252 -55342753 + (TTA)n Simple_repeat Simple_repeat 2 87 0 229 228 39 94 chr20 11325263 11325390 -55342615 - MIR SINE MIR 0 262 143 287 284 45 0 chr20 11326063 11326151 -55341854 - MER117 DNA MER1_type -105 92 1 1562 219 90 86 chr20 11326639 11327186 -55340819 + MLT1H LTR MaLR 1 549 0 336 214 98 27 chr20 11327668 11327780 -55340225 + MIR3 SINE MIR 82 201 -7 821 276 70 0 chr20 11327802 11328030 -55339975 + MIR SINE MIR 19 262 0 398 276 119 27 chr20 11328307 11328543 -55339462 + MIR SINE MIR 10 262 0 1233 241 103 52 chr20 11328642 11329069 -55338936 + LTR16A1 LTR ERVL 9 457 0 2017 143 20 6 chr20 11329703 11330045 -55337960 + L1PB4 LINE L1 5809 6155 -1 237 309 73 44 chr20 11332546 11332682 -55335323 + L2 LINE L2 2567 2706 -608 1142 252 89 28 chr20 11332818 11333185 -55334820 - L1ME3A LINE L1 -9 6161 5761 1635 203 0 23 chr20 11333185 11333486 -55334519 - AluJb SINE Alu -18 294 1 1142 252 89 28 chr20 11333486 11333555 -55334450 - L1ME3A LINE L1 -409 5761 5698 477 270 52 33 chr20 11333589 11333859 -55334146 + L1M4 LINE L1 5119 5393 -753 302 380 88 15 chr20 11333873 11334078 -55333927 + L2 LINE L2 2872 3091 -181 226 333 0 15 chr20 11334127 11334193 -55333812 + L2 LINE L2 3205 3269 -3 221 0 35 0 chr20 11334416 11334445 -55333560 + (TA)n Simple_repeat Simple_repeat 2 31 0 1047 239 81 32 chr20 11335555 11335986 -55332019 - LTR16A1 LTR ERVL 0 457 6 389 339 131 51 chr20 11336010 11336462 -55331543 - L2 LINE L2 0 3313 2826 7356 91 9 0 chr20 11338062 11339866 -55328139 - L1PA7 LINE L1 -1 6153 4336 2261 114 7 0 chr20 11340374 11340673 -55327332 - AluSx SINE Alu -11 301 1 224 379 9 17 chr20 11341164 11341280 -55326725 + L2 LINE L2 2399 2513 -801 606 243 164 0 chr20 11341292 11341444 -55326561 + MER5A DNA MER1_type 7 183 -6 334 248 139 0 chr20 11341470 11341571 -55326434 + L2 LINE L2 2591 2705 -609 180 111 0 0 chr20 11341571 11341598 -55326407 + (A)n Simple_repeat Simple_repeat 1 27 0 419 337 111 33 chr20 11341696 11341880 -55326125 + L2 LINE L2 2853 3021 -292 1198 183 22 139 chr20 11341880 11342213 -55325792 - MLT1A1 LTR MaLR -2 363 85 2137 126 3 0 chr20 11342213 11342506 -55325499 - AluSx SINE Alu -18 294 1 1198 183 22 139 chr20 11342506 11342583 -55325422 - MLT1A1 LTR MaLR -280 85 1 419 337 111 33 chr20 11342583 11342822 -55325183 + L2 LINE L2 3021 3309 -4 225 94 0 0 chr20 11342890 11342922 -55325083 + (T)n Simple_repeat Simple_repeat 1 32 0 511 233 15 15 chr20 11343320 11343453 -55324552 - MER94 DNA DNA 0 134 2 783 264 16 51 chr20 11343503 11343757 -55324248 + MIR SINE MIR 14 258 -4 23 0 0 0 chr20 11343764 11343787 -55324218 + AT_rich Low_complexity Low_complexity 1 23 0 837 172 0 8 chr20 11343797 11343931 -55324074 - FAM SINE Alu -22 163 31 181 298 46 46 chr20 11343947 11344078 -55323927 - L2 LINE L2 -533 2781 2651 346 345 103 43 chr20 11346035 11346473 -55321532 - L2 LINE L2 -1 3271 2808 528 313 147 11 chr20 11346641 11346906 -55321099 - MLT1K LTR MaLR -187 401 101 353 315 0 0 chr20 11347301 11347412 -55320593 + LTR16A1 LTR ERVL 1 111 -346 * 680 285 30 0 chr20 11347400 11347635 -55320370 + LTR16A1 LTR ERVL 216 457 0 192 135 0 0 chr20 11350198 11350235 -55317770 + (GA)n Simple_repeat Simple_repeat 2 38 0 2028 85 8 0 chr20 11350770 11351147 -55316858 - AluSq SINE Alu 0 401 23 204 200 0 0 chr20 11351766 11351801 -55316204 + (CAG)n Simple_repeat Simple_repeat 2 36 0 288 258 21 21 chr20 11351804 11351901 -55316104 + MER94 DNA DNA 4 100 -34 345 197 0 0 chr20 11351991 11352062 -55315943 + (CA)n Simple_repeat Simple_repeat 1 71 0 3135 145 13 40 chr20 11352083 11352313 -55315692 + L1MA9 LINE L1 5708 5943 -369 2033 148 18 6 chr20 11352313 11352652 -55315353 + MER2 DNA MER2_type 2 344 0 3135 145 13 40 chr20 11352652 11353043 -55314962 + L1MA9 LINE L1 5943 6312 0 199 360 118 7 chr20 11353513 11353666 -55314339 - MIR SINE MIR -85 177 8 472 262 98 13 chr20 11355129 11355474 -55312531 + MLT1J2 LTR MaLR 62 449 -1 1785 203 70 37 chr20 11355879 11356363 -55311642 - MLT1H LTR MaLR -37 512 13 191 312 92 28 chr20 11356500 11356609 -55311396 + MIR SINE MIR 33 148 -60 1146 237 75 25 chr20 11358649 11359130 -55308875 - MER114 LTR ERV 0 648 144 994 251 122 3 chr20 11359139 11359443 -55308562 + MLT1A2 LTR MaLR 1 367 -23 23 54 0 0 chr20 11359592 11359629 -55308376 + AT_rich Low_complexity Low_complexity 1 37 0 24 32 0 0 chr20 11359744 11359775 -55308230 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr20 11359833 11359855 -55308150 + AT_rich Low_complexity Low_complexity 1 22 0 29 101 0 0 chr20 11359879 11359978 -55308027 + AT_rich Low_complexity Low_complexity 1 99 0 27 73 0 0 chr20 11360012 11360067 -55307938 + AT_rich Low_complexity Low_complexity 1 55 0 634 277 113 35 chr20 11360284 11360656 -55307349 + MLT1J2 LTR MaLR 50 450 0 22 56 0 0 chr20 11360854 11360890 -55307115 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr20 11360895 11360916 -55307089 + AT_rich Low_complexity Low_complexity 1 21 0 719 322 38 8 chr20 11360926 11361162 -55306843 - MIR SINE MIR -13 249 7 205 353 35 17 chr20 11361234 11361350 -55306655 - MIR SINE MIR 0 262 145 637 314 67 21 chr20 11363276 11363652 -55304353 - LTR16C LTR ERVL 0 491 99 555 233 259 11 chr20 11363935 11364124 -55303881 - MIR SINE MIR -12 250 15 1180 280 87 3 chr20 11364210 11364567 -55303438 + MLT1F LTR MaLR 1 387 -155 2386 219 68 41 chr20 11364567 11365458 -55302547 + L1ME2 LINE L1 4463 5375 -789 1279 221 13 93 chr20 11365458 11365856 -55302149 + MLT1A2 LTR MaLR 1 366 -8 1183 241 3 18 chr20 11365862 11366190 -55301815 + L1ME2 LINE L1 5369 5691 -473 * 1667 180 21 0 chr20 11366186 11366514 -55301491 + L1PB4 LINE L1 5784 6118 -38 2244 102 0 19 chr20 11366519 11366834 -55301171 + AluSc SINE Alu 1 309 0 1097 246 111 26 chr20 11366906 11367329 -55300676 + L1ME2 LINE L1 5698 6156 -8 2101 94 0 76 chr20 11367904 11368232 -55299773 - AluSq SINE Alu -10 303 1 279 235 0 0 chr20 11368401 11368452 -55299553 + L2 LINE L2 3212 3262 -51 275 234 0 16 chr20 11368469 11368533 -55299472 - MIR SINE MIR -65 143 81 3116 166 9 5 chr20 11368535 11369097 -55298908 + L1MB3 LINE L1 5618 6181 -2 2001 156 77 0 chr20 11369133 11369472 -55298533 + MLT1A1 LTR MaLR 1 365 0 770 172 41 53 chr20 11369699 11369868 -55298137 - MER5B DNA MER1_type -1 177 11 373 315 125 16 chr20 11370066 11370250 -55297755 + MIR SINE MIR 7 210 -52 276 30 0 0 chr20 11370467 11370500 -55297505 + (TG)n Simple_repeat Simple_repeat 1 33 0 483 159 30 76 chr20 11372195 11372327 -55295678 - L1MA9 LINE L1 -104 6208 6083 570 136 29 0 chr20 11372332 11372435 -55295570 + L1MB1 LINE L1 5765 5870 -319 343 201 49 49 chr20 11372466 11372610 -55295395 - L1MC5 LINE L1 -284 7677 7534 233 370 31 24 chr20 11372699 11372826 -55295179 + L2 LINE L2 3186 3313 0 593 129 0 0 chr20 11374951 11375036 -55292969 + L1PB4 LINE L1 6059 6143 -13 191 391 0 22 chr20 11375238 11375328 -55292677 + MIR3 SINE MIR 9 96 -112 269 209 275 0 chr20 11375328 11375419 -55292586 - MER5A DNA MER1_type 0 189 74 239 298 182 0 chr20 11375464 11375585 -55292420 + MIR SINE MIR 88 230 -32 264 303 22 11 chr20 11375626 11375715 -55292290 - MIR3 SINE MIR 0 208 119 26 0 0 0 chr20 11375910 11375936 -55292069 + AT_rich Low_complexity Low_complexity 1 26 0 641 269 13 0 chr20 11377158 11377314 -55290691 + MLT1H LTR MaLR 101 258 -291 223 114 45 0 chr20 11377608 11377652 -55290353 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 238 235 0 0 chr20 11377667 11377718 -55290287 + MLT1H LTR MaLR 485 535 -14 282 299 176 18 chr20 11378091 11378279 -55289726 - MIR SINE MIR -46 216 4 282 56 0 0 chr20 11378297 11378333 -55289672 + (GAA)n Simple_repeat Simple_repeat 2 37 0 182 260 0 20 chr20 11378430 11378480 -55289525 - L2 LINE L2 -10 3262 3214 429 344 71 34 chr20 11378700 11379081 -55288924 + LTR16C LTR ERVL 97 491 0 20147 107 13 13 chr20 11380938 11384759 -55283246 + L1PA7 LINE L1 2325 6154 0 1943 191 19 12 chr20 11385212 11385630 -55282375 - MER61C LTR ERV1 0 434 14 432 285 177 0 chr20 11387439 11387569 -55280436 + MER5A DNA MER1_type 31 183 -6 2034 220 89 55 chr20 11387819 11388450 -55279555 - MLT1E1 LTR MaLR 0 654 3 231 250 15 15 chr20 11388451 11388519 -55279486 + (CATATA)n Simple_repeat Simple_repeat 3 70 0 747 254 61 35 chr20 11388559 11389015 -55278990 + MER113 DNA MER1_type? 2 469 -52 450 247 128 13 chr20 11389642 11389986 -55278019 + LTR33 LTR ERVL 112 510 -11 329 271 78 0 chr20 11391011 11391132 -55276873 - MER113 DNA MER1_type? -43 478 348 255 341 28 28 chr20 11391132 11391311 -55276694 + HsTC2 DNA Tc2 1 179 -1719 * 560 225 6 17 chr20 11391310 11391483 -55276522 + HsTC2 DNA Tc2 1728 1898 0 345 269 58 19 chr20 11391633 11391737 -55276268 + MIR SINE MIR 85 192 -70 35 41 0 0 chr20 11391967 11392016 -55275989 + AT_rich Low_complexity Low_complexity 1 49 0 638 267 58 33 chr20 11393441 11393681 -55274324 + LTR16A1 LTR ERVL 147 392 -65 183 129 0 0 chr20 11393694 11393725 -55274280 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1286 145 9 22 chr20 11393735 11393962 -55274043 - L1PA16 LINE L1 -9 6157 5934 200 328 30 15 chr20 11394295 11394362 -55273643 - MIR SINE MIR -175 87 20 614 260 133 5 chr20 11395766 11395962 -55272043 + MIR SINE MIR 41 261 -1 352 326 145 31 chr20 11396235 11396462 -55271543 + MIR SINE MIR 7 259 -3 450 302 69 11 chr20 11397415 11397604 -55270401 - MIR SINE MIR 0 262 63 418 270 0 0 chr20 11397625 11397725 -55270280 + MER94 DNA DNA 1 100 -34 183 205 0 0 chr20 11397770 11397809 -55270196 + CT-rich Low_complexity Low_complexity 2 40 0 518 122 0 11 chr20 11397986 11398076 -55269929 + (TTCCC)n Simple_repeat Simple_repeat 5 93 0 898 147 6 11 chr20 11398077 11398254 -55269751 + CT-rich Low_complexity Low_complexity 3 178 0 693 296 49 42 chr20 11399166 11399453 -55268552 - LTR16C LTR ERVL -121 370 82 2262 90 7 3 chr20 11400337 11400637 -55267368 + AluSc SINE Alu 1 301 -8 244 265 0 59 chr20 11401151 11401219 -55266786 - L2 LINE L2 -1 3312 3249 816 320 14 46 chr20 11401653 11402003 -55266002 + MER115 DNA AcHobo 14 352 -341 23 0 0 0 chr20 11402275 11402298 -55265707 + AT_rich Low_complexity Low_complexity 1 23 0 909 247 122 67 chr20 11402923 11403356 -55264649 - LTR16A1 LTR ERVL 0 457 1 413 216 62 38 chr20 11405026 11405278 -55262727 + MLT1H LTR MaLR 229 520 -29 480 352 6 6 chr20 11406085 11406264 -55261741 + MIR3 SINE MIR 7 185 -23 476 168 32 0 chr20 11406382 11406477 -55261528 - MER5A DNA MER1_type -83 106 9 183 80 0 0 chr20 11407048 11407073 -55260932 + (T)n Simple_repeat Simple_repeat 1 25 0 255 279 0 0 chr20 11407349 11407410 -55260595 - Charlie8 DNA MER1_type -1000 1417 1357 23 33 0 0 chr20 11407828 11407858 -55260147 + AT_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr20 11407903 11407938 -55260067 + AT_rich Low_complexity Low_complexity 1 35 0 2134 65 0 95 chr20 11408655 11408992 -55259013 + AluYa8 SINE Alu 1 305 -5 2452 196 43 24 chr20 11409666 11410292 -55257713 - L1MC4 LINE L1 -148 7894 7257 2631 222 37 14 chr20 11410303 11411011 -55256994 - L1MC4a LINE L1 -6 7802 7079 405 194 10 10 chr20 11411016 11411114 -55256891 - L1MC4a LINE L1 -627 7181 7084 22 0 0 0 chr20 11411539 11411561 -55256444 + AT_rich Low_complexity Low_complexity 1 22 0 1059 255 72 33 chr20 11411586 11412005 -55256000 - MLT1J2 LTR MaLR -13 437 3 403 280 112 105 chr20 11414247 11414829 -55253176 + MLT1K LTR MaLR 3 588 0 520 302 79 5 chr20 11415528 11415717 -55252288 + MIR SINE MIR 54 256 -6 546 300 63 1 chr20 11416280 11416706 -55251299 - LTR33A LTR ERVL -1 522 66 675 207 71 47 chr20 11418512 11418681 -55249324 - MER5A DNA MER1_type 0 189 17 251 302 101 34 chr20 11419128 11419277 -55248728 + MIR SINE MIR 48 206 -56 6872 32 0 1 chr20 11419743 11420595 -55247410 - L1PA4 LINE L1 0 6155 5305 22 70 0 0 chr20 11420642 11420685 -55247320 + AT_rich Low_complexity Low_complexity 1 43 0 1989 243 48 20 chr20 11420713 11421364 -55246641 - L1ME3A LINE L1 -48 6122 5454 276 232 116 98 chr20 11422286 11422510 -55245495 - MLT1H LTR MaLR -5 544 317 354 176 220 0 chr20 11422533 11422624 -55245381 - MLT1H LTR MaLR -30 519 409 2030 247 86 9 chr20 11422624 11423171 -55244834 - MLT1E LTR MaLR 0 593 5 551 337 66 0 chr20 11423945 11424111 -55243894 + MER5B DNA MER1_type 1 177 -1 308 331 25 8 chr20 11424284 11424405 -55243600 - MIR3 SINE MIR -41 167 45 931 189 26 9 chr20 11424692 11424920 -55243085 - L1MC3 LINE L1 0 7785 7554 2717 146 4 4 chr20 11424934 11425386 -55242619 - L1PA16 LINE L1 -9 6157 5706 2411 193 45 7 chr20 11425693 11426231 -55241774 + MER74A LTR ERVL 1 558 0 400 262 0 0 chr20 11426232 11426316 -55241689 - MER5A DNA MER1_type -104 85 2 308 296 0 0 chr20 11426661 11426742 -55241263 + MIR SINE MIR 79 159 -103 1604 181 68 12 chr20 11426742 11427079 -55240926 - MLT1A1 LTR MaLR 0 365 10 342 223 58 48 chr20 11427088 11427191 -55240814 + MIR SINE MIR 159 262 0 274 235 37 0 chr20 11428147 11428228 -55239777 - MER112 DNA MER1_type -62 198 115 231 36 0 0 chr20 11428228 11428256 -55239749 + (TG)n Simple_repeat Simple_repeat 2 29 0 546 219 42 26 chr20 11428373 11428565 -55239440 - MER113 DNA MER1_type? -76 445 251 421 58 92 0 chr20 11429110 11429230 -55238775 + (TA)n Simple_repeat Simple_repeat 2 132 0 216 250 0 19 chr20 11430238 11430290 -55237715 + C-rich Low_complexity Low_complexity 5 55 0 671 143 0 254 chr20 11430980 11431092 -55236913 + MER5A DNA MER1_type 2 16 -173 2141 121 7 0 chr20 11431092 11431382 -55236623 - AluSx SINE Alu -20 292 1 671 143 0 254 chr20 11431382 11431521 -55236484 + MER5A DNA MER1_type 16 189 0 256 326 82 0 chr20 11433077 11433175 -55234830 - MIR3 SINE MIR -21 187 82 25 31 0 0 chr20 11433533 11433565 -55234440 + AT_rich Low_complexity Low_complexity 1 32 0 379 295 48 19 chr20 11433580 11433848 -55234157 - L1MC5 LINE L1 -68 7893 7618 1853 155 3 7 chr20 11434857 11435154 -55232851 - AluJb SINE Alu -16 296 1 228 206 40 95 chr20 11435617 11435743 -55232262 + MER5A DNA MER1_type 8 126 -63 * 852 228 5 11 chr20 11435634 11435818 -55232187 - MER5A DNA MER1_type -6 183 1 231 322 99 16 chr20 11437120 11437241 -55230764 - MIR3 SINE MIR -3 205 75 816 200 32 16 chr20 11438078 11438263 -55229742 + MER5A DNA MER1_type 1 188 -1 334 352 16 0 chr20 11438661 11438786 -55229219 + MIR SINE MIR 31 157 -105 1708 258 117 23 chr20 11439006 11439221 -55228784 - L1ME3A LINE L1 -13 6157 5964 234 0 0 0 chr20 11439221 11439247 -55228758 + (TG)n Simple_repeat Simple_repeat 1 26 0 1708 258 117 23 chr20 11439247 11439929 -55228076 - L1ME3A LINE L1 -206 5964 5177 625 220 21 5 chr20 11439940 11440126 -55227879 - MER53 DNA DNA 0 189 1 243 88 0 0 chr20 11440138 11440172 -55227833 + (T)n Simple_repeat Simple_repeat 1 34 0 211 226 45 34 chr20 11440785 11440962 -55227043 + (TA)n Simple_repeat Simple_repeat 1 179 0 * 262 331 0 0 chr20 11440835 11441004 -55227001 + (ATG)n Simple_repeat Simple_repeat 1 169 0 808 219 19 0 chr20 11441504 11441659 -55226346 + MER5A DNA MER1_type 10 167 -22 207 261 0 0 chr20 11441693 11441739 -55226266 - MER5A DNA MER1_type -1 188 143 279 0 0 0 chr20 11441964 11441995 -55226010 + (CA)n Simple_repeat Simple_repeat 2 32 0 234 0 0 0 chr20 11442425 11442451 -55225554 + (ATG)n Simple_repeat Simple_repeat 2 27 0 529 312 50 23 chr20 11442460 11442678 -55225327 - MIR SINE MIR -18 244 21 638 291 153 35 chr20 11442805 11443296 -55224709 + MLT1H LTR MaLR 1 549 0 384 185 22 43 chr20 11445425 11445517 -55222488 + MIR SINE MIR 100 189 -73 297 286 34 75 chr20 11445691 11445838 -55222167 + L2 LINE L2 2911 3051 -221 238 313 173 7 chr20 11446099 11446249 -55221756 - MIR3 SINE MIR -4 204 30 563 308 60 95 chr20 11446325 11446906 -55221099 + MLT1K LTR MaLR 28 588 0 653 304 17 0 chr20 11447286 11447467 -55220538 - MIR SINE MIR -11 251 68 249 302 105 12 chr20 11447473 11447559 -55220446 - MIR SINE MIR -152 110 17 753 221 7 7 chr20 11447594 11447734 -55220271 + MER5A DNA MER1_type 16 155 -34 1886 148 14 48 chr20 11447734 11448085 -55219920 + MER1B DNA MER1_type 1 339 0 559 243 46 35 chr20 11448471 11448582 -55219423 + MER5B DNA MER1_type 4 120 -58 2178 104 0 0 chr20 11448582 11448894 -55219111 - AluSc SINE Alu 0 312 1 559 243 46 35 chr20 11448894 11448954 -55219051 + MER5B DNA MER1_type 120 178 0 1506 234 123 5 chr20 11449603 11450052 -55217953 + MLT1H LTR MaLR 40 541 -8 24 53 0 0 chr20 11450076 11450114 -55217891 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr20 11450914 11450937 -55217068 + AT_rich Low_complexity Low_complexity 1 23 0 308 345 86 7 chr20 11451210 11451349 -55216656 + MIR3 SINE MIR 34 183 -25 1684 230 86 16 chr20 11452365 11452878 -55215127 - L1ME3A LINE L1 -6 6164 5616 594 219 152 6 chr20 11454742 11454906 -55213099 + MER5A DNA MER1_type 1 188 -1 207 191 24 0 chr20 11454977 11455019 -55212986 + CT-rich Low_complexity Low_complexity 3 45 0 1430 209 71 145 chr20 11455688 11455810 -55212195 - L1ME2 LINE L1 -9 6155 6025 810 197 7 7 chr20 11455810 11455957 -55212048 - FRAM SINE Alu -16 150 4 1430 209 71 145 chr20 11455957 11456193 -55211812 - L1ME2 LINE L1 -139 6025 5773 648 162 0 52 chr20 11456193 11456329 -55211676 - L1PA13 LINE L1 -1 6162 6034 1430 209 71 145 chr20 11456329 11456748 -55211257 - L1ME2 LINE L1 -391 5773 5435 397 106 15 0 chr20 11457042 11457108 -55210897 - MLT1D LTR MaLR 0 505 439 2528 113 8 0 chr20 11457145 11457515 -55210490 - L1PA13 LINE L1 0 6163 5791 1340 234 69 28 chr20 11457515 11457950 -55210055 - MLT1D LTR MaLR -52 453 1 414 234 60 98 chr20 11458220 11458435 -55209570 + MLT1H LTR MaLR 60 265 -144 234 222 0 111 chr20 11458511 11458619 -55209386 + MLT1I LTR MaLR 316 409 0 2359 75 14 0 chr20 11460889 11461183 -55206822 - AluSp SINE Alu -13 300 3 418 213 110 0 chr20 11461464 11461600 -55206405 + LTR33A LTR ERVL 373 523 0 298 405 15 8 chr20 11461631 11461762 -55206243 - MIR SINE MIR -129 133 2 1074 249 100 57 chr20 11462084 11462672 -55205333 + MLT1F LTR MaLR 2 538 -4 255 316 46 52 chr20 11462798 11462972 -55205033 - LTR33 LTR ERVL -237 284 112 241 250 0 0 chr20 11464233 11464285 -55203720 + L2 LINE L2 3261 3312 -1 338 294 62 12 chr20 11464843 11465003 -55203002 - MIR SINE MIR -13 249 82 309 341 102 63 chr20 11465861 11466608 -55201397 + L2 LINE L2 2256 3072 -200 209 278 0 0 chr20 11466608 11466662 -55201343 + L2 LINE L2 3210 3263 -9 2730 177 16 57 chr20 11466718 11467351 -55200654 + LTR9 LTR ERV1 1 607 -5 23 33 0 0 chr20 11468423 11468453 -55199552 + AT_rich Low_complexity Low_complexity 1 30 0 307 235 0 12 chr20 11469820 11469901 -55198104 - L1ME3A LINE L1 -10 6160 6081 372 274 12 30 chr20 11470667 11470831 -55197174 + A-rich Low_complexity Low_complexity 1 161 0 6250 201 21 18 chr20 11470834 11471004 -55197001 + L1PB3 LINE L1 3690 3858 -2288 2499 43 0 10 chr20 11471004 11471303 -55196702 + AluY SINE Alu 1 296 -15 6250 201 21 18 chr20 11471303 11472621 -55195384 + L1PB3 LINE L1 3858 5182 -964 22 35 0 0 chr20 11472621 11472650 -55195355 + AT_rich Low_complexity Low_complexity 1 29 0 349 91 97 6 chr20 11472650 11472815 -55195190 + (TA)n Simple_repeat Simple_repeat 1 180 0 4687 148 57 8 chr20 11472816 11473732 -55194273 + L1PB3 LINE L1 5188 6147 -7 304 343 56 36 chr20 11474042 11474345 -55193660 - L1MEc LINE L1 -4726 1584 1276 2000 144 0 3 chr20 11474354 11474645 -55193360 - AluSx SINE Alu -20 292 3 270 275 8 25 chr20 11474692 11474812 -55193193 - L1MEc LINE L1 -4919 1200 1083 4070 166 25 53 chr20 11474823 11475411 -55192594 - L1MB7 LINE L1 -17 6167 5563 221 30 61 0 chr20 11475411 11475444 -55192561 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1928 139 0 11 chr20 11475444 11475731 -55192274 - AluSx SINE Alu -28 284 1 4070 166 25 53 chr20 11475731 11476537 -55191468 - L1MB7 LINE L1 -619 5565 4833 307 281 144 45 chr20 11477030 11477383 -55190622 - MLT1H LTR MaLR -161 388 1 353 243 20 46 chr20 11477448 11477600 -55190405 + L1MC5 LINE L1 7782 7929 -32 2200 110 16 0 chr20 11479977 11480310 -55187695 - AluSq SINE Alu 0 338 1 35 54 0 0 chr20 11481372 11481428 -55186577 + AT_rich Low_complexity Low_complexity 1 56 0 225 0 0 0 chr20 11481533 11481558 -55186447 + (A)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr20 11481572 11481601 -55186404 + AT_rich Low_complexity Low_complexity 1 29 0 1740 140 31 67 chr20 11481610 11481968 -55186037 - MER46B DNA MER2_type -16 220 1 337 139 13 76 chr20 11481968 11481999 -55186006 + MER46A DNA MER2_type 145 170 -66 1968 180 46 59 chr20 11482084 11482540 -55185465 - MSTB2 LTR MaLR -7 450 1 1503 253 63 35 chr20 11482671 11483180 -55184825 - MLT1H LTR MaLR 0 549 27 357 350 106 25 chr20 11483317 11483751 -55184254 - L2 LINE L2 -664 2650 2182 247 304 54 9 chr20 11483958 11484070 -55183935 - MIR SINE MIR -14 248 132 210 337 117 17 chr20 11484276 11484405 -55183600 - MIR SINE MIR -62 146 6 424 299 89 6 chr20 11485103 11485260 -55182745 + MIR SINE MIR 64 233 -29 230 373 11 6 chr20 11485270 11485447 -55182558 + (TGG)n Simple_repeat Simple_repeat 3 180 0 198 143 0 0 chr20 11485501 11485536 -55182469 + (TGG)n Simple_repeat Simple_repeat 2 36 0 342 331 6 17 chr20 11485563 11485735 -55182270 + (TGG)n Simple_repeat Simple_repeat 1 170 0 398 230 0 7 chr20 11485773 11485912 -55182093 + (TGG)n Simple_repeat Simple_repeat 2 139 0 842 258 10 14 chr20 11487515 11487724 -55180281 - MIR SINE MIR -2 260 53 540 256 0 0 chr20 11488939 11489095 -55178910 + GA-rich Low_complexity Low_complexity 4 159 0 191 296 23 0 chr20 11489346 11489390 -55178615 - L3b LINE CR1 -22 1561 1517 252 146 0 0 chr20 11489652 11489693 -55178312 + L2 LINE L2 3262 3302 -11 1200 304 84 14 chr20 11491284 11491800 -55176205 - L2 LINE L2 -6 3307 2744 509 339 9 21 chr20 11491832 11492065 -55175940 - L2 LINE L2 -927 2387 2158 416 311 66 0 chr20 11492902 11493024 -55174981 + L2 LINE L2 3137 3266 -6 889 224 33 0 chr20 11493579 11493762 -55174243 - MER5A DNA MER1_type 0 189 1 477 298 0 8 chr20 11493763 11493884 -55174121 + MER5B DNA MER1_type 3 122 -56 497 238 175 0 chr20 11494033 11494193 -55173812 + MER5A DNA MER1_type 1 188 -1 523 282 77 0 chr20 11494231 11494387 -55173618 - MER5B DNA MER1_type 0 178 11 1115 263 62 7 chr20 11494672 11494980 -55173025 + MLT1H LTR MaLR 1 325 -224 559 260 47 6 chr20 11495111 11495280 -55172725 + MLT1H LTR MaLR 374 549 0 252 369 66 0 chr20 11496039 11496161 -55171844 - MIR SINE MIR -39 223 94 269 299 35 11 chr20 11496461 11496548 -55171457 - MLT1K LTR MaLR -354 234 146 558 244 39 0 chr20 11496587 11496714 -55171291 - FLAM_A SINE Alu -1 132 1 23 68 0 0 chr20 11497919 11497963 -55170042 + AT_rich Low_complexity Low_complexity 1 44 0 261 0 0 0 chr20 11500276 11500305 -55167700 + (CA)n Simple_repeat Simple_repeat 2 30 0 520 291 143 57 chr20 11500635 11501110 -55166895 - LTR33 LTR ERVL -4 517 2 294 296 112 24 chr20 11501232 11501438 -55166567 - L2 LINE L2 -854 2460 2237 301 293 0 52 chr20 11504147 11504263 -55163742 - MIR SINE MIR -75 187 78 1867 137 18 31 chr20 11504891 11505272 -55162733 + L1MA7 LINE L1 5912 6287 -4 328 246 76 42 chr20 11506070 11506188 -55161817 - MIR SINE MIR -66 142 21 233 320 20 33 chr20 11506320 11506473 -55161532 + MARNA DNA Mariner 16 166 -420 643 319 151 12 chr20 11506588 11506933 -55161072 + L2 LINE L2 2921 3313 0 334 248 0 88 chr20 11506990 11507127 -55160878 - 7SK RNA RNA -68 125 1 536 308 46 17 chr20 11507140 11507380 -55160625 + MARNA DNA Mariner 171 417 -169 221 103 26 0 chr20 11509309 11509348 -55158657 - L2 LINE L2 -1 3312 3273 1435 175 22 121 chr20 11509459 11509864 -55158141 + MLT1A1 LTR MaLR 1 365 0 251 289 0 13 chr20 11511200 11511276 -55156729 + MIR3 SINE MIR 104 178 -30 378 42 0 0 chr20 11512332 11512380 -55155625 + (TG)n Simple_repeat Simple_repeat 2 49 0 315 0 0 0 chr20 11513113 11513148 -55154857 + (CA)n Simple_repeat Simple_repeat 2 36 0 252 314 178 18 chr20 11514891 11515060 -55152945 + LTR16C LTR ERVL 296 491 0 186 300 29 0 chr20 11515181 11515251 -55152754 - L2 LINE L2 -13 3259 3188 233 310 10 10 chr20 11515722 11515822 -55152183 - MER103 DNA DNA -12 154 55 537 298 68 34 chr20 11516202 11516407 -55151598 + MIR SINE MIR 28 239 -23 215 295 166 14 chr20 11516441 11516580 -55151425 + MIR SINE MIR 1 160 -102 216 67 0 0 chr20 11518030 11518060 -55149945 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 211 315 47 82 chr20 11519673 11519905 -55148100 + MIR SINE MIR 32 255 -7 36 53 0 0 chr20 11520247 11520304 -55147701 + AT_rich Low_complexity Low_complexity 1 57 0 293 311 88 21 chr20 11520561 11520799 -55147206 - L1M4 LINE L1 -1967 4179 3926 27 81 0 0 chr20 11520813 11520875 -55147130 + AT_rich Low_complexity Low_complexity 1 62 0 698 228 72 8 chr20 11521319 11521556 -55146449 - L1MC4a LINE L1 -1867 5941 5690 323 295 74 0 chr20 11521617 11521712 -55146293 + L1MC/D LINE L1 5540 5641 -2167 339 280 91 55 chr20 11522272 11522547 -55145458 - HAL1 LINE L1 -17 2490 2206 30 93 0 0 chr20 11522547 11522633 -55145372 + AT_rich Low_complexity Low_complexity 1 86 0 217 340 0 0 chr20 11525197 11525247 -55142758 - MIR3 SINE MIR -40 168 119 314 250 29 0 chr20 11525585 11525652 -55142353 + Charlie4 DNA MER1_type 14 82 -1879 1275 164 132 9 chr20 11525652 11526075 -55141930 - LTR54 LTR ERV1 0 510 1 557 199 90 13 chr20 11526246 11526402 -55141603 + Charlie4 DNA MER1_type 1781 1948 -13 1637 194 10 7 chr20 11526640 11526969 -55141036 + AluJo SINE Alu 3 332 0 22 0 0 0 chr20 11529305 11529327 -55138678 + AT_rich Low_complexity Low_complexity 1 22 0 2474 168 9 12 chr20 11529369 11529798 -55138207 - MSTC LTR MaLR 0 428 1 46 54 0 0 chr20 11530027 11530101 -55137904 + AT_rich Low_complexity Low_complexity 1 74 0 1162 188 68 19 chr20 11530891 11531200 -55136805 + MER33 DNA MER1_type 1 324 0 345 196 9 103 chr20 11531293 11531400 -55136605 + MIR SINE MIR 118 214 -48 288 292 44 0 chr20 11532744 11532846 -55135159 - MIR SINE MIR -62 146 60 452 307 108 21 chr20 11533550 11533837 -55134168 - LTR16C LTR ERVL -2 489 178 226 323 32 36 chr20 11534082 11534274 -55133731 - L2 LINE L2 -314 2958 2766 946 298 41 52 chr20 11534312 11534964 -55133041 + Charlie7 DNA MER1_type 79 723 -1889 288 234 11 32 chr20 11535017 11535111 -55132894 + (CATATA)n Simple_repeat Simple_repeat 4 95 0 530 274 102 28 chr20 11535120 11535335 -55132670 - LTR16C LTR ERVL -63 428 198 1403 186 8 8 chr20 11535681 11535934 -55132071 + AluJo SINE Alu 22 274 -38 515 170 0 9 chr20 11535942 11536048 -55131957 + GA-rich Low_complexity Low_complexity 1 105 0 2100 128 14 0 chr20 11536464 11536761 -55131244 + AluSx SINE Alu 3 303 -9 21 36 0 0 chr20 11536794 11536822 -55131183 + AT_rich Low_complexity Low_complexity 1 28 0 405 225 50 0 chr20 11537214 11537294 -55130711 - MER5A DNA MER1_type -84 105 22 448 248 209 0 chr20 11538124 11538253 -55129752 - MER5A DNA MER1_type -2 187 32 2328 157 21 23 chr20 11538871 11539304 -55128701 - MSTB1 LTR MaLR 0 432 1 6806 65 10 0 chr20 11539523 11540870 -55127135 + L1PA7 LINE L1 4787 6151 -3 27 0 0 0 chr20 11541809 11541836 -55126169 + AT_rich Low_complexity Low_complexity 1 27 0 360 265 8 8 chr20 11542816 11542933 -55125072 - L2 LINE L2 -1285 2029 1913 634 264 86 6 chr20 11542977 11543151 -55124854 + MER5A DNA MER1_type 1 188 -1 198 382 13 0 chr20 11543725 11543801 -55124204 - L3 LINE CR1 -613 964 888 195 299 90 0 chr20 11543990 11544057 -55123948 + MER5A DNA MER1_type 117 189 0 207 0 0 0 chr20 11544086 11544109 -55123896 + (TTA)n Simple_repeat Simple_repeat 2 24 0 320 260 123 26 chr20 11547125 11547279 -55120726 - MARNA DNA Mariner -224 362 194 192 107 0 0 chr20 11547339 11547367 -55120638 - L2 LINE L2 -535 2779 2752 569 296 89 37 chr20 11547374 11547911 -55120094 - L2 LINE L2 0 3313 2704 2305 176 38 5 chr20 11547934 11548378 -55119627 - L1PB4 LINE L1 0 6156 5698 767 216 38 0 chr20 11548384 11548569 -55119436 + L1 LINE L1 4873 5064 -1082 606 239 22 0 chr20 11548574 11548712 -55119293 - L2 LINE L2 -599 2715 2575 598 277 110 68 chr20 11548715 11549188 -55118817 - LTR33 LTR ERVL -1 520 28 1663 305 76 29 chr20 11549722 11550513 -55117492 - ERVL LTR ERVL -757 5007 4180 865 283 42 21 chr20 11550558 11550894 -55117111 - ERVL LTR ERVL -2360 3294 2952 491 173 0 0 chr20 11550945 11551026 -55116979 - LTR29 LTR ERV1 -66 556 476 443 292 43 86 chr20 11551315 11551572 -55116433 - ERVL LTR ERVL -3174 2590 2345 1767 136 13 84 chr20 11551584 11551894 -55116111 - AluSx SINE Alu -24 288 1 311 333 61 14 chr20 11551957 11552104 -55115901 - ERVL LTR ERVL -5076 688 535 21 0 0 0 chr20 11552240 11552261 -55115744 + AT_rich Low_complexity Low_complexity 1 21 0 232 295 9 48 chr20 11552557 11552662 -55115343 - LTR33 LTR ERVL -20 501 401 1338 273 95 69 chr20 11552876 11553000 -55115005 - L2 LINE L2 -636 2678 2559 1444 184 106 0 chr20 11553000 11553176 -55114829 - AluJb SINE Alu 0 312 93 423 0 0 0 chr20 11553176 11553223 -55114782 + (TTTA)n Simple_repeat Simple_repeat 1 47 0 1444 184 106 0 chr20 11553223 11553328 -55114677 - AluJb SINE Alu -219 93 1 1338 273 95 69 chr20 11553328 11553874 -55114131 - L2 LINE L2 -755 2559 1990 3127 177 26 25 chr20 11553876 11554603 -55113402 - L1PA16 LINE L1 -1131 5015 4288 3504 146 4 31 chr20 11554604 11554869 -55113136 + L1PA16 LINE L1 5034 5305 -861 2071 122 0 10 chr20 11554869 11555163 -55112842 + AluSx SINE Alu 1 291 -21 3504 146 4 31 chr20 11555163 11555708 -55112297 + L1PA16 LINE L1 5305 5828 -338 1994 137 0 22 chr20 11555719 11556033 -55111972 + AluSx SINE Alu 6 312 0 1286 149 64 4 chr20 11556038 11556273 -55111732 + L1PA16 LINE L1 5909 6157 -9 2190 300 84 13 chr20 11556294 11557115 -55110890 - L2 LINE L2 -1342 1972 1094 23 33 0 0 chr20 11557275 11557305 -55110700 + AT_rich Low_complexity Low_complexity 1 30 0 210 288 122 29 chr20 11558081 11558220 -55109785 - MIR SINE MIR 0 262 111 223 62 0 0 chr20 11558222 11558254 -55109751 + (TTTA)n Simple_repeat Simple_repeat 4 180 0 1446 162 22 0 chr20 11558254 11558483 -55109522 - AluJo SINE Alu -30 282 50 199 241 134 54 chr20 11558565 11558677 -55109328 + L2 LINE L2 3192 3312 -1 22 0 0 0 chr20 11559141 11559163 -55108842 + AT_rich Low_complexity Low_complexity 1 22 0 386 294 103 7 chr20 11560630 11560766 -55107239 + MIR3 SINE MIR 12 160 -48 1894 143 7 0 chr20 11560850 11561154 -55106851 + AluSx SINE Alu 1 306 0 22 0 0 0 chr20 11561157 11561179 -55106826 + AT_rich Low_complexity Low_complexity 1 22 0 937 281 95 20 chr20 11561330 11561763 -55106242 - MLT1H LTR MaLR -41 508 1 183 114 0 0 chr20 11562791 11562826 -55105179 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 456 247 0 0 chr20 11563272 11563357 -55104648 + MER5A DNA MER1_type 105 189 0 2221 97 10 0 chr20 11563439 11563729 -55104276 + AluSg SINE Alu 1 293 -17 190 350 90 10 chr20 11564145 11564245 -55103760 - MIR SINE MIR -126 136 29 203 261 0 0 chr20 11564328 11564374 -55103631 + L2 LINE L2 3261 3306 -7 1460 205 3 50 chr20 11564540 11564862 -55103143 + AluJo SINE Alu 1 307 -5 1047 224 23 0 chr20 11564874 11565138 -55102867 + L1MA4 LINE L1 6019 6288 -12 302 395 35 35 chr20 11565597 11565936 -55102069 + L2 LINE L2 2327 2665 -649 272 380 47 16 chr20 11566394 11566523 -55101482 + L2 LINE L2 3140 3272 0 288 253 7 41 chr20 11566758 11566904 -55101101 - HAL1 LINE L1 -123 2384 2244 1570 126 0 0 chr20 11567158 11567372 -55100633 - AluSg/x SINE Alu -13 299 86 7624 27 0 0 chr20 11567378 11568602 -55099403 - L1PA4 LINE L1 0 6155 4932 252 369 13 40 chr20 11570455 11570604 -55097401 + MIR3 SINE MIR 38 182 -26 269 279 0 0 chr20 11571689 11571757 -55096248 - L2 LINE L2 -4 3268 3201 1009 263 122 24 chr20 11572280 11572449 -55095556 - L1ME LINE L1 -2694 3386 3235 252 0 0 0 chr20 11572449 11572477 -55095528 + (TC)n Simple_repeat Simple_repeat 1 28 0 1009 263 122 24 chr20 11572477 11572515 -55095490 - L1ME LINE L1 -2845 3235 3202 1563 129 0 0 chr20 11572515 11572732 -55095273 - AluSg/x SINE Alu -21 291 75 1009 263 122 24 chr20 11572732 11573204 -55094801 - L1ME LINE L1 -2878 3202 2639 203 0 37 0 chr20 11573430 11573457 -55094548 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 635 205 0 0 chr20 11573461 11573573 -55094432 - FRAM SINE Alu -46 130 19 686 315 79 55 chr20 11573645 11574486 -55093519 - L1ME LINE L1 -4880 1190 385 24 53 0 0 chr20 11574641 11574679 -55093326 + AT_rich Low_complexity Low_complexity 1 38 0 539 346 91 0 chr20 11574854 11575097 -55092908 + L2 LINE L2 2388 2652 -662 26 64 0 0 chr20 11575306 11575353 -55092652 + AT_rich Low_complexity Low_complexity 1 47 0 289 314 58 48 chr20 11575787 11576096 -55091909 - L2 LINE L2 -611 2703 2392 655 343 73 50 chr20 11577434 11578307 -55089698 + L2 LINE L2 2132 3042 -230 1836 173 3 3 chr20 11578307 11578656 -55089349 - AluSx SINE Alu 0 312 1 655 343 73 50 chr20 11578656 11578888 -55089117 + L2 LINE L2 3042 3267 -5 301 292 58 25 chr20 11579037 11579157 -55088848 - MIR3 SINE MIR -38 170 47 28 0 0 0 chr20 11579174 11579202 -55088803 + AT_rich Low_complexity Low_complexity 1 28 0 2090 113 3 7 chr20 11580545 11580827 -55087178 + AluSq SINE Alu 1 281 -32 960 53 0 0 chr20 11580827 11580958 -55087047 + (GAA)n Simple_repeat Simple_repeat 2 132 0 758 309 33 52 chr20 11580972 11581070 -55086935 - MLT1K LTR MaLR -87 501 403 2035 117 7 3 chr20 11581070 11581256 -55086749 - AluSx SINE Alu 0 312 122 222 37 0 0 chr20 11581256 11581283 -55086722 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2035 117 7 3 chr20 11581283 11581406 -55086599 - AluSx SINE Alu -190 122 1 758 309 33 52 chr20 11581406 11581673 -55086332 - MLT1K LTR MaLR -185 403 143 180 329 63 0 chr20 11583661 11583740 -55084265 - MIR SINE MIR -109 153 70 1809 170 0 3 chr20 11583941 11584235 -55083770 + AluSx SINE Alu 15 307 -5 194 203 0 34 chr20 11585786 11585845 -55082160 + GA-rich Low_complexity Low_complexity 4 60 0 544 292 65 6 chr20 11586851 11587019 -55080986 + MIR SINE MIR 13 190 -72 21 36 0 0 chr20 11587711 11587739 -55080266 + AT_rich Low_complexity Low_complexity 1 28 0 211 355 0 26 chr20 11587892 11587968 -55080037 - L3 LINE CR1 -5 1572 1499 243 422 54 5 chr20 11588620 11588805 -55079200 + MIR SINE MIR 49 242 -20 355 329 14 14 chr20 11589332 11589478 -55078527 + CT-rich Low_complexity Low_complexity 3 148 0 21 0 0 0 chr20 11589586 11589607 -55078398 + AT_rich Low_complexity Low_complexity 1 21 0 1029 240 71 45 chr20 11589837 11590262 -55077743 - LTR16A1 LTR ERVL -19 438 3 22 0 0 0 chr20 11591381 11591403 -55076602 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr20 11591639 11591665 -55076340 + AT_rich Low_complexity Low_complexity 1 26 0 189 74 0 0 chr20 11592078 11592105 -55075900 + (GGAAA)n Simple_repeat Simple_repeat 2 28 0 22 35 0 0 chr20 11592291 11592320 -55075685 + AT_rich Low_complexity Low_complexity 1 29 0 1257 198 59 72 chr20 11592774 11593148 -55074857 + MLT1B LTR MaLR 22 390 0 590 300 172 58 chr20 11593380 11594483 -55073522 - L2 LINE L2 -75 3197 1983 930 253 99 60 chr20 11594676 11595060 -55072945 + LTR16C LTR ERVL 85 483 -8 507 222 161 43 chr20 11596290 11596452 -55071553 - MER5A DNA MER1_type 0 189 9 353 296 16 16 chr20 11597081 11597206 -55070799 - MER5A DNA MER1_type -57 132 8 9444 85 5 1 chr20 11597993 11600066 -55067939 - L1PA7 LINE L1 -3 6151 4072 180 97 0 0 chr20 11600103 11600134 -55067871 + (TCTG)n Simple_repeat Simple_repeat 4 34 0 20334 135 14 78 chr20 11600141 11604500 -55063505 - L1PA7 LINE L1 -2061 4085 9 23 0 0 0 chr20 11604565 11604588 -55063417 + AT_rich Low_complexity Low_complexity 1 23 0 242 324 59 15 chr20 11604878 11605008 -55062997 - MIR SINE MIR -76 132 28 197 326 51 41 chr20 11605967 11606065 -55061940 + L2 LINE L2 3151 3249 -23 25 31 0 0 chr20 11606692 11606724 -55061281 + AT_rich Low_complexity Low_complexity 1 32 0 33 0 0 0 chr20 11607045 11607078 -55060927 + AT_rich Low_complexity Low_complexity 1 33 0 658 187 105 0 chr20 11607693 11607864 -55060141 - MER53 DNA DNA 0 189 1 427 271 130 38 chr20 11608257 11608519 -55059486 + MLT1H LTR MaLR 5 290 -259 255 31 0 0 chr20 11610557 11610589 -55057416 + (TTTTTG)n Simple_repeat Simple_repeat 3 34 0 1370 205 0 0 chr20 11610589 11610833 -55057172 - AluJo SINE Alu -66 246 3 318 50 0 0 chr20 11610915 11610955 -55057050 + (CA)n Simple_repeat Simple_repeat 2 41 0 351 269 126 63 chr20 11611661 11611884 -55056121 - MIR SINE MIR -2 260 24 554 319 94 4 chr20 11612327 11612562 -55055443 + MIR SINE MIR 7 262 0 420 234 28 9 chr20 11613342 11613449 -55054556 - MER5A DNA MER1_type -79 110 2 224 356 11 11 chr20 11614708 11614795 -55053210 + MIR SINE MIR 53 139 -69 2090 136 3 3 chr20 11615025 11615333 -55052672 - AluSx SINE Alu -4 308 1 218 182 73 0 chr20 11615558 11615613 -55052392 + L2 LINE L2 3165 3223 -90 244 185 25 37 chr20 11615660 11615722 -55052283 + (TTAA)n Simple_repeat Simple_repeat 2 64 -17 2104 119 0 24 chr20 11615722 11616016 -55051989 - AluSq SINE Alu -26 287 1 244 185 25 37 chr20 11616016 11616034 -55051971 + (TTAA)n Simple_repeat Simple_repeat 64 81 0 277 310 76 13 chr20 11616676 11616834 -55051171 + MER5B DNA MER1_type 11 178 0 470 296 82 0 chr20 11617241 11617400 -55050605 + MIR3 SINE MIR 36 207 -1 1652 228 117 24 chr20 11617723 11618263 -55049742 - L1ME3A LINE L1 -7 6163 5581 200 94 31 0 chr20 11618532 11618564 -55049441 + GA-rich Low_complexity Low_complexity 2 34 0 725 227 129 95 chr20 11619166 11619607 -55048398 - LTR16A1 LTR ERVL -1 456 1 737 312 90 26 chr20 11620039 11620350 -55047655 - LTR16C LTR ERVL 0 491 161 521 336 38 38 chr20 11621100 11621415 -55046590 - L2 LINE L2 -1 3312 2998 882 167 13 0 chr20 11622665 11622815 -55045190 - FRAM SINE Alu -2 174 23 240 86 0 0 chr20 11622835 11622870 -55045135 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 210 37 0 0 chr20 11623401 11623428 -55044577 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 225 108 0 0 chr20 11623584 11623621 -55044384 + (A)n Simple_repeat Simple_repeat 1 37 0 224 278 0 0 chr20 11624511 11624565 -55043440 + (TTG)n Simple_repeat Simple_repeat 1 54 0 1762 265 54 26 chr20 11624903 11625549 -55042456 + L1ME3A LINE L1 5455 6118 -52 24 77 0 0 chr20 11628000 11628052 -55039953 + AT_rich Low_complexity Low_complexity 1 52 0 317 107 0 18 chr20 11628086 11628142 -55039863 + (TTTTC)n Simple_repeat Simple_repeat 2 56 0 2172 125 0 6 chr20 11628144 11628456 -55039549 - AluSx SINE Alu -2 310 1 1722 273 25 2 chr20 11628999 11629431 -55038574 + LTR16C LTR ERVL 32 473 -18 24 0 0 0 chr20 11629914 11629938 -55038067 + AT_rich Low_complexity Low_complexity 1 24 0 228 371 69 9 chr20 11629940 11630056 -55037949 + MER5A DNA MER1_type 55 177 -12 2334 128 11 22 chr20 11632405 11632773 -55035232 + THE1B LTR MaLR 1 364 0 223 195 0 0 chr20 11632883 11632924 -55035081 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 485 350 102 9 chr20 11633137 11633460 -55034545 - MLT1I LTR MaLR 0 409 57 1181 278 111 18 chr20 11633901 11634351 -55033654 - MLT1H LTR MaLR 0 549 58 9674 204 58 20 chr20 11634377 11634728 -55033277 - L1MC3 LINE L1 -18 7767 7431 2269 116 0 0 chr20 11634728 11635031 -55032974 - AluSx SINE Alu -9 303 1 9674 204 58 20 chr20 11635031 11635391 -55032614 - L1MC3 LINE L1 -354 7431 7086 270 116 0 0 chr20 11635391 11635434 -55032571 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 9674 204 58 20 chr20 11635434 11636408 -55031597 - L1MC3 LINE L1 -699 7086 5972 189 0 0 0 chr20 11636408 11636429 -55031576 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 9674 204 58 20 chr20 11636429 11637016 -55030989 - L1MC3 LINE L1 -1813 5972 5408 21 57 0 0 chr20 11637056 11637091 -55030914 + AT_rich Low_complexity Low_complexity 1 35 0 258 250 148 23 chr20 11637181 11637269 -55030736 + L2 LINE L2 3215 3313 0 33 0 0 0 chr20 11637293 11637326 -55030679 + AT_rich Low_complexity Low_complexity 1 33 0 4231 181 78 50 chr20 11638037 11638274 -55029731 - MER21A LTR ERV1 0 931 702 2342 77 27 55 chr20 11638274 11638639 -55029366 - L1PA10 LINE L1 -8 6160 5806 4231 181 78 50 chr20 11638639 11639300 -55028705 - MER21A LTR ERV1 -229 702 8 1042 132 76 36 chr20 11639592 11639842 -55028163 - L1MA9 LINE L1 -10 6302 6043 408 331 40 74 chr20 11640716 11641039 -55026966 + MLT1I LTR MaLR 98 409 0 509 308 70 78 chr20 11641901 11642529 -55025476 - L2 LINE L2 -4 3268 2643 1871 135 15 0 chr20 11642637 11642911 -55025094 + AluSp SINE Alu 1 278 -35 423 0 0 0 chr20 11642913 11642960 -55025045 + (CA)n Simple_repeat Simple_repeat 1 47 0 395 317 154 35 chr20 11643025 11643337 -55024668 - L2 LINE L2 -750 2564 2216 1351 237 50 0 chr20 11643338 11643655 -55024350 + MER58B DNA MER1_type 1 333 -8 180 111 0 0 chr20 11643929 11643956 -55024049 + (A)n Simple_repeat Simple_repeat 1 27 0 26 0 0 0 chr20 11644480 11644506 -55023499 + AT_rich Low_complexity Low_complexity 1 26 0 216 0 0 0 chr20 11644610 11644634 -55023371 + (CA)n Simple_repeat Simple_repeat 2 25 0 207 284 15 30 chr20 11645288 11645355 -55022650 + L2 LINE L2 3248 3313 0 489 252 44 7 chr20 11645460 11645595 -55022410 - MIR SINE MIR -50 212 73 196 324 35 78 chr20 11646073 11646215 -55021790 + MIR3 SINE MIR 10 145 -63 237 65 0 0 chr20 11646996 11647027 -55020978 + (CA)n Simple_repeat Simple_repeat 1 62 0 237 65 0 0 chr20 11647027 11647058 -55020947 + (CA)n Simple_repeat Simple_repeat 1 31 0 885 278 177 24 chr20 11648585 11649038 -55018967 + MLT1H LTR MaLR 7 528 -21 297 245 21 115 chr20 11649379 11649571 -55018434 - L2 LINE L2 -127 3186 3013 414 370 17 0 chr20 11649802 11649975 -55018030 + MIR3 SINE MIR 30 205 -3 186 150 0 0 chr20 11651044 11651084 -55016921 + (CA)n Simple_repeat Simple_repeat 1 40 0 623 307 46 28 chr20 11651240 11651458 -55016547 + MIR SINE MIR 3 224 -38 253 390 44 25 chr20 11651788 11651947 -55016058 - L3 LINE CR1 -22 1555 1394 25 51 0 0 chr20 11652082 11652121 -55015884 + AT_rich Low_complexity Low_complexity 1 39 0 315 0 0 0 chr20 11652449 11652484 -55015521 + (CA)n Simple_repeat Simple_repeat 2 36 0 621 280 70 42 chr20 11652930 11653675 -55014330 + L1MEd LINE L1 925 1693 -4436 22 35 0 0 chr20 11653883 11653912 -55014093 + AT_rich Low_complexity Low_complexity 1 29 0 455 328 78 0 chr20 11654231 11654463 -55013542 + L1MEd LINE L1 2256 2505 -3624 2158 149 95 0 chr20 11654663 11655053 -55012952 - MSTA LTR MaLR 0 428 2 402 276 93 45 chr20 11655086 11655354 -55012651 + L1MEd LINE L1 3122 3402 -2727 863 280 0 0 chr20 11658692 11658881 -55009124 - MER58A DNA MER1_type -29 195 7 332 311 66 20 chr20 11659650 11659801 -55008204 - MIR3 SINE MIR -14 194 37 717 233 23 6 chr20 11660055 11660227 -55007778 + MER5B DNA MER1_type 4 178 0 285 29 0 0 chr20 11662896 11662930 -55005075 + (TG)n Simple_repeat Simple_repeat 1 34 0 336 358 21 21 chr20 11663670 11663860 -55004145 + MIR SINE MIR 32 221 -41 547 100 31 8 chr20 11664512 11664525 -55003480 + MER5A DNA MER1_type 4 19 -170 194 227 201 45 chr20 11664525 11664679 -55003326 - MER5A DNA MER1_type -2 187 10 1928 158 10 3 chr20 11665203 11665507 -55002498 + AluJb SINE Alu 1 306 -6 307 184 53 0 chr20 11666474 11666550 -55001455 + L1ME3 LINE L1 6081 6160 -2 309 198 148 60 chr20 11666709 11666891 -55001114 + L1ME3A LINE L1 5964 6161 -9 421 292 147 42 chr20 11667249 11667602 -55000403 + L2 LINE L2 2922 3311 -2 728 197 45 30 chr20 11670806 11671070 -54996935 - LTR37B LTR ERV1 0 468 201 245 234 11 43 chr20 11671155 11671249 -54996756 + MER113 DNA MER1_type? 111 201 -320 843 230 5 10 chr20 11671709 11671909 -54996096 + MER113 DNA MER1_type? 257 455 -66 848 275 17 13 chr20 11672303 11672536 -54995469 + MIR SINE MIR 23 256 -6 265 275 197 49 chr20 11673380 11673766 -54994239 + L3 LINE CR1 1014 1456 -121 21 0 0 0 chr20 11673873 11673894 -54994111 + AT_rich Low_complexity Low_complexity 1 21 0 516 273 55 16 chr20 11674436 11674619 -54993386 + MIR SINE MIR 70 259 -3 713 234 112 24 chr20 11677361 11677566 -54990439 - MIR SINE MIR 0 262 40 282 270 61 52 chr20 11677923 11678038 -54989967 - MIR SINE MIR -57 151 36 216 259 0 0 chr20 11678082 11678140 -54989865 + CT-rich Low_complexity Low_complexity 1 58 0 348 285 95 65 chr20 11678776 11679039 -54988966 - MLT1H LTR MaLR -198 351 81 1041 244 44 87 chr20 11679688 11680147 -54987858 + MLT1H LTR MaLR 18 456 -93 1536 85 0 19 chr20 11680344 11680556 -54987449 + AluY SINE Alu 93 300 -11 266 264 34 37 chr20 11680739 11680851 -54987154 + MIR SINE MIR 38 154 -63 1018 241 24 59 chr20 11680917 11681394 -54986611 + MLT1H1 LTR MaLR 10 555 0 328 242 0 42 chr20 11681427 11681522 -54986483 + MER81 DNA DNA 24 114 0 22 56 0 0 chr20 11681970 11682006 -54985999 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr20 11684847 11684877 -54983128 + AT_rich Low_complexity Low_complexity 1 30 0 255 239 0 45 chr20 11685761 11685828 -54982177 - L2 LINE L2 -4 3309 3246 1347 251 86 35 chr20 11687210 11687732 -54980273 - MLT1H LTR MaLR 0 549 1 1969 149 55 9 chr20 11687827 11688155 -54979850 - MER61A LTR ERV1 0 343 1 1966 152 13 7 chr20 11688410 11688719 -54979286 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr20 11688795 11688816 -54979189 + AT_rich Low_complexity Low_complexity 1 21 0 306 309 64 0 chr20 11690007 11690117 -54977888 - L2 LINE L2 -11 3261 3145 1941 144 16 48 chr20 11690177 11690553 -54977452 + THE1B LTR MaLR 1 364 0 566 276 24 93 chr20 11690916 11691249 -54976756 - MER102b DNA MER1_type -17 324 15 742 315 98 19 chr20 11691983 11692361 -54975644 + L2 LINE L2 2906 3313 0 1749 169 6 31 chr20 11692605 11692925 -54975080 + AluSx SINE Alu 1 312 0 731 349 111 18 chr20 11693665 11694431 -54973574 + L2 LINE L2 1839 2675 -639 2444 70 0 10 chr20 11694614 11694916 -54973089 - AluY SINE Alu -12 299 1 223 401 167 0 chr20 11695200 11695332 -54972673 + L2 LINE L2 3119 3272 0 22 0 0 0 chr20 11696464 11696486 -54971519 + AT_rich Low_complexity Low_complexity 1 22 0 300 244 101 50 chr20 11701085 11701204 -54966801 - MIR3 SINE MIR -12 196 72 212 306 228 11 chr20 11702280 11702460 -54965545 + MIR SINE MIR 5 223 -39 509 265 68 0 chr20 11703450 11703612 -54964393 + MLT1J LTR MaLR 17 189 -322 520 301 86 0 chr20 11704617 11704780 -54963225 + MIR SINE MIR 86 262 0 384 311 172 27 chr20 11707104 11707470 -54960535 - LTR33 LTR ERVL -2 519 101 23 68 0 0 chr20 11707470 11707514 -54960491 + AT_rich Low_complexity Low_complexity 1 44 0 2720 68 11 3 chr20 11707514 11707880 -54960125 - L1PB1 LINE L1 -1 6150 5782 301 196 0 0 chr20 11707881 11707937 -54960068 + L1MC4 LINE L1 6648 6703 -1339 776 48 19 0 chr20 11707952 11708056 -54959949 - L1P5 LINE L1 -360 5791 5686 5781 197 12 4 chr20 11708062 11709417 -54958588 + L1 LINE L1 3881 5245 -901 669 268 35 10 chr20 11709924 11710179 -54957826 + MLT1H LTR MaLR 13 316 -233 1895 139 3 16 chr20 11710556 11710859 -54957146 - AluSx SINE Alu -13 299 1 331 345 131 1 chr20 11710884 11711063 -54956942 + MIR SINE MIR 25 224 -38 1542 231 10 8 chr20 11711389 11711778 -54956227 - MER63 DNA MER1_type -1 1061 672 398 364 12 12 chr20 11712177 11712339 -54955666 + MIR3 SINE MIR 36 197 -11 1804 174 96 53 chr20 11713895 11714418 -54953587 + L1MB8 LINE L1 5629 6173 -5 26 0 0 0 chr20 11714454 11714480 -54953525 + AT_rich Low_complexity Low_complexity 1 26 0 819 278 195 20 chr20 11714711 11715027 -54952978 + L2 LINE L2 2769 3028 -285 2153 102 0 3 chr20 11715027 11715339 -54952666 + AluSp SINE Alu 1 311 0 819 278 195 20 chr20 11715339 11715487 -54952518 + L2 LINE L2 3028 3313 0 673 307 197 13 chr20 11715812 11716361 -54951644 - L2 LINE L2 -13 3300 2639 214 246 0 33 chr20 11716796 11716857 -54951148 + GA-rich Low_complexity Low_complexity 1 59 0 234 0 0 0 chr20 11717775 11717801 -54950204 + (TG)n Simple_repeat Simple_repeat 2 27 0 240 35 0 0 chr20 11718943 11718972 -54949033 + (TG)n Simple_repeat Simple_repeat 2 30 0 189 220 0 60 chr20 11718982 11719032 -54948973 + L3 LINE CR1 1499 1545 -32 864 261 103 58 chr20 11719080 11719525 -54948480 + MLT1H LTR MaLR 10 474 -75 1408 125 65 0 chr20 11719783 11719999 -54948006 - MER30 DNA MER1_type 0 230 1 203 218 18 18 chr20 11720640 11720695 -54947310 + (TATATG)n Simple_repeat Simple_repeat 6 60 0 216 319 28 0 chr20 11720831 11720903 -54947102 - L2 LINE L2 -4 3309 3236 793 233 33 14 chr20 11721637 11721847 -54946158 - LTR16C LTR ERVL 0 491 278 665 262 58 52 chr20 11722081 11722444 -54945561 + LTR33 LTR ERVL 139 503 -18 277 307 175 18 chr20 11722476 11722642 -54945363 - MIR SINE MIR -70 192 1 245 283 0 76 chr20 11724416 11724508 -54943497 - MIR SINE MIR -64 198 114 238 296 0 34 chr20 11726293 11726381 -54941624 - MER5B DNA MER1_type -69 109 25 2158 120 0 0 chr20 11726617 11726916 -54941089 + AluSx SINE Alu 1 299 -13 797 202 11 16 chr20 11726921 11727463 -54940542 + CT-rich Low_complexity Low_complexity 1 539 0 1122 50 0 0 chr20 11728587 11728728 -54939277 + (TTTTA)n Simple_repeat Simple_repeat 2 142 0 217 277 109 10 chr20 11728780 11728881 -54939124 + L2 LINE L2 2676 2786 -528 1999 267 125 32 chr20 11729170 11730217 -54937788 + L2 LINE L2 2042 3178 -135 354 269 55 63 chr20 11730404 11730675 -54937330 - MLT1G LTR MaLR -224 366 98 644 214 0 0 chr20 11730677 11730831 -54937174 - L1MB8 LINE L1 -304 5874 5721 922 147 66 30 chr20 11730834 11731031 -54936974 + L1MB5 LINE L1 5963 6166 -8 266 315 43 0 chr20 11731113 11731205 -54936800 + L2 LINE L2 2971 3066 -247 1962 127 32 0 chr20 11731429 11731712 -54936293 + AluSc SINE Alu 1 292 -17 898 228 64 14 chr20 11731946 11732165 -54935840 - MIR SINE MIR -28 234 5 31 68 0 0 chr20 11732546 11732605 -54935400 + AT_rich Low_complexity Low_complexity 1 59 0 4504 157 61 40 chr20 11733963 11734343 -54933662 + L1MA9 LINE L1 5108 5479 -833 1891 143 0 0 chr20 11734343 11734609 -54933396 + AluSx SINE Alu 1 266 -46 4504 157 61 40 chr20 11734609 11735409 -54932596 + L1MA9 LINE L1 5479 6312 0 27 29 0 0 chr20 11737663 11737697 -54930308 + AT_rich Low_complexity Low_complexity 1 34 0 505 280 90 65 chr20 11737715 11738180 -54929825 - L1MC5 LINE L1 -239 7722 7246 596 250 60 12 chr20 11739089 11739257 -54928748 + MER5A DNA MER1_type 12 187 -2 205 314 66 41 chr20 11739151 11739272 -54928733 - MER5A DNA MER1_type -63 126 3 * 345 268 0 0 chr20 11739522 11739593 -54928412 - MER81 DNA DNA -43 71 1 576 289 93 0 chr20 11739801 11740005 -54928000 + MIR SINE MIR 12 234 -28 370 277 59 0 chr20 11740152 11740271 -54927734 + MER117 DNA MER1_type 15 140 -57 25 0 0 0 chr20 11740453 11740478 -54927527 + AT_rich Low_complexity Low_complexity 1 25 0 273 57 0 0 chr20 11740620 11740655 -54927350 + (CATA)n Simple_repeat Simple_repeat 2 36 0 22 70 0 0 chr20 11740669 11740712 -54927293 + AT_rich Low_complexity Low_complexity 1 43 0 1558 242 41 32 chr20 11740885 11741377 -54926628 + LTR40a LTR ERVL 1 496 -23 264 77 0 0 chr20 11741403 11741442 -54926563 + (TC)n Simple_repeat Simple_repeat 1 39 0 354 175 26 0 chr20 11742623 11742737 -54925268 + (TG)n Simple_repeat Simple_repeat 1 117 0 1423 169 4 66 chr20 11742858 11743131 -54924874 + AluJo SINE Alu 1 256 -56 23 54 0 0 chr20 11744115 11744152 -54923853 + AT_rich Low_complexity Low_complexity 1 37 0 386 260 178 20 chr20 11744967 11745113 -54922892 - MER5A DNA MER1_type -12 177 9 408 198 45 9 chr20 11745134 11745245 -54922760 + MER3 DNA MER1_type 54 168 -41 1106 204 63 42 chr20 11745247 11745630 -54922375 + MER3 DNA MER1_type 2234 2624 0 289 326 141 28 chr20 11746037 11746389 -54921616 + L2 LINE L2 2702 3087 -185 216 329 29 50 chr20 11746424 11746564 -54921441 - L3 LINE CR1 -237 1340 1204 1653 144 12 0 chr20 11747080 11747323 -54920682 + AluSx SINE Alu 50 295 -17 657 139 31 7 chr20 11747483 11747681 -54920324 - LTR16A1 LTR ERVL 0 457 216 222 385 10 0 chr20 11747963 11748059 -54919946 - L3 LINE CR1 -465 1112 1016 402 198 58 0 chr20 11748724 11748810 -54919195 - MER5A DNA MER1_type 0 189 99 7137 238 46 29 chr20 11748825 11750155 -54917850 + L1MB8 LINE L1 2669 3974 -2210 1799 133 101 17 chr20 11750155 11750501 -54917504 - THE1C LTR MaLR 0 375 1 7137 238 46 29 chr20 11750501 11751935 -54916070 + L1MB8 LINE L1 3974 5486 -698 2081 50 123 0 chr20 11751935 11752212 -54915793 + AluY SINE Alu 1 311 0 7137 238 46 29 chr20 11752212 11752223 -54915782 + L1MB8 LINE L1 5486 5495 -689 1512 187 12 22 chr20 11752271 11752592 -54915413 + L1MB8 LINE L1 5855 6172 -6 436 301 14 42 chr20 11753458 11753601 -54914404 - MER5A DNA MER1_type -4 185 47 285 301 97 19 chr20 11753771 11753874 -54914131 - L2 LINE L2 -43 3229 3119 284 380 53 12 chr20 11754505 11754676 -54913329 - MIR SINE MIR -80 182 5 198 0 0 0 chr20 11754846 11754868 -54913137 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 280 330 81 17 chr20 11754907 11755080 -54912925 - MLT1J2 LTR MaLR -54 396 213 272 102 20 0 chr20 11757061 11757110 -54910895 + (TC)n Simple_repeat Simple_repeat 1 50 0 399 350 35 15 chr20 11757285 11757490 -54910515 - MIR SINE MIR -18 244 37 234 304 0 29 chr20 11757560 11757629 -54910376 - L2 LINE L2 -1 3271 3205 517 100 0 0 chr20 11757729 11757799 -54910206 - Alu SINE Alu -15 297 228 669 276 64 61 chr20 11757844 11758156 -54909849 + MLT1K LTR MaLR 190 502 -86 684 331 75 68 chr20 11758575 11759309 -54908696 - L2 LINE L2 -463 2851 2113 325 203 34 8 chr20 11759314 11759432 -54908573 - LTR37A LTR ERV1 0 426 306 3527 195 23 50 chr20 11759438 11761099 -54906906 + L1MB7 LINE L1 4559 6173 -11 442 204 88 0 chr20 11761155 11761302 -54906703 - LTR37A LTR ERV1 -175 251 92 2297 170 40 2 chr20 11761412 11761841 -54906164 - L1MB3 LINE L1 -8 6175 5731 609 198 16 115 chr20 11761856 11762038 -54905967 - MLT1H LTR MaLR -385 164 1 180 367 75 20 chr20 11762098 11762245 -54905760 + L2 LINE L2 3110 3264 -8 283 270 31 44 chr20 11762514 11762619 -54905386 - MER5A DNA MER1_type -23 155 59 301 300 209 5 chr20 11762633 11762984 -54905021 + LTR50 LTR ERVL 326 795 0 244 337 22 11 chr20 11763845 11763937 -54904068 + L2 LINE L2 2991 3083 -189 513 289 90 45 chr20 11763944 11764210 -54903795 + MLT1I LTR MaLR 101 378 -31 272 279 12 35 chr20 11764263 11764349 -54903656 + MIR SINE MIR 66 149 -113 2335 204 33 95 chr20 11766094 11767167 -54900838 + L1ME1 LINE L1 5007 5999 -167 574 160 0 0 chr20 11767179 11767285 -54900720 - L1MA8 LINE L1 -113 6178 6073 233 254 17 0 chr20 11767289 11767348 -54900657 + L1ME1 LINE L1 5997 6056 -110 590 277 28 21 chr20 11767461 11767602 -54900403 - L2 LINE L2 0 3313 3172 764 247 22 6 chr20 11767633 11767811 -54900194 - MER5A DNA MER1_type 0 189 9 681 337 69 33 chr20 11767819 11768348 -54899657 - L2 LINE L2 -157 3156 2601 3161 201 26 15 chr20 11768348 11769074 -54898931 - L1 LINE L1 -750 5396 4663 2637 93 6 105 chr20 11769117 11769623 -54898382 - L1PB1 LINE L1 -1 6150 5695 4813 144 56 22 chr20 11769623 11769980 -54898025 + L1MA10 LINE L1 5402 5746 -588 396 0 0 0 chr20 11769980 11770024 -54897981 + (CA)n Simple_repeat Simple_repeat 2 45 0 4813 144 56 22 chr20 11770024 11770562 -54897443 + L1MA10 LINE L1 5746 6327 -7 495 315 79 0 chr20 11770577 11770742 -54897263 - L2 LINE L2 -704 2610 2433 25 0 0 0 chr20 11771359 11771384 -54896621 + AT_rich Low_complexity Low_complexity 1 25 0 203 286 0 14 chr20 11771671 11771741 -54896264 + (TTA)n Simple_repeat Simple_repeat 2 70 0 266 293 0 13 chr20 11771886 11771961 -54896044 + MIR SINE MIR 49 122 -140 944 250 44 24 chr20 11771983 11772469 -54895536 + L1MB3 LINE L1 1747 2334 -4050 * 4674 232 53 20 chr20 11772441 11773954 -54894051 + L1MB3 LINE L1 3616 5366 -1016 1978 148 9 6 chr20 11773963 11774300 -54893705 + L1MB3 LINE L1 6035 6372 -47 253 265 199 15 chr20 11774757 11774893 -54893112 - MIR SINE MIR -74 188 28 23 0 0 0 chr20 11775176 11775199 -54892806 + AT_rich Low_complexity Low_complexity 1 23 0 988 238 68 57 chr20 11775958 11776328 -54891677 + MLT1A2 LTR MaLR 1 374 0 637 273 108 60 chr20 11776394 11776709 -54891296 - MLT1H LTR MaLR 0 549 220 435 239 58 13 chr20 11776948 11777103 -54890902 + L1ME3A LINE L1 2840 3001 -3381 289 346 13 0 chr20 11777241 11777397 -54890608 + (TTAGGG)n Simple_repeat Simple_repeat 5 162 0 413 290 68 46 chr20 11777575 11778470 -54889535 + L1ME3A LINE L1 5153 6278 -128 1537 97 0 5 chr20 11778470 11778676 -54889329 - AluY SINE Alu -3 308 104 413 290 68 46 chr20 11778676 11778807 -54889198 + L1ME3A LINE L1 6278 6405 -1 295 298 51 75 chr20 11778906 11779198 -54888807 - L1ME LINE L1 -431 5690 5406 355 333 138 5 chr20 11779244 11779439 -54888566 + MIR SINE MIR 28 248 -14 321 26 0 0 chr20 11779439 11779477 -54888528 + (TG)n Simple_repeat Simple_repeat 1 38 0 209 252 8 24 chr20 11779528 11779651 -54888354 + GA-rich Low_complexity Low_complexity 2 122 0 21 36 0 0 chr20 11780906 11780934 -54887071 + AT_rich Low_complexity Low_complexity 1 28 0 333 0 0 0 chr20 11781820 11781857 -54886148 + (CA)n Simple_repeat Simple_repeat 2 38 0 375 306 0 21 chr20 11782526 11782670 -54885335 - L1MC4a LINE L1 -1972 5836 5696 343 307 108 47 chr20 11782795 11783007 -54884998 + MIR SINE MIR 21 245 -17 68 55 0 0 chr20 11785047 11785157 -54882848 + AT_rich Low_complexity Low_complexity 1 110 0 192 352 0 0 chr20 11785609 11785663 -54882342 + L3 LINE CR1 1519 1572 -5 435 318 59 6 chr20 11785807 11785977 -54882028 + MIR SINE MIR 33 211 -51 1639 189 0 25 chr20 11787629 11787946 -54880059 + AluJb SINE Alu 1 309 -3 684 227 42 32 chr20 11787952 11788168 -54879837 - LTR37B LTR ERV1 -40 428 211 1071 230 24 0 chr20 11788237 11788450 -54879555 - MER58A DNA MER1_type 0 224 7 344 264 36 0 chr20 11788456 11788566 -54879439 - LTR37B LTR ERV1 -348 120 7 221 339 105 8 chr20 11788577 11788701 -54879304 + MIR SINE MIR 78 213 -49 688 336 52 17 chr20 11789284 11789673 -54878332 - LTR16A LTR ERVL 0 457 43 1546 201 67 24 chr20 11789830 11790203 -54877802 - MLT1F1 LTR MaLR -2 565 177 202 246 35 0 chr20 11790203 11790260 -54877745 + GA-rich Low_complexity Low_complexity 1 59 0 659 147 0 53 chr20 11790260 11790450 -54877555 + (GA)n Simple_repeat Simple_repeat 1 180 0 455 283 12 32 chr20 11790460 11790658 -54877347 - MLT1E LTR MaLR -370 197 1 257 203 95 0 chr20 11790824 11790898 -54877107 + MER5C DNA MER1_type 44 124 -200 206 271 186 0 chr20 11790943 11791013 -54876992 + MER5C DNA MER1_type 242 324 0 186 355 82 9 chr20 11791080 11791190 -54876815 + MIR SINE MIR 23 140 -68 21 95 0 0 chr20 11791463 11791526 -54876479 + AT_rich Low_complexity Low_complexity 1 63 0 21 36 0 0 chr20 11791840 11791868 -54876137 + AT_rich Low_complexity Low_complexity 1 28 0 500 283 27 80 chr20 11791891 11792136 -54875869 - MIR SINE MIR -27 235 6 342 362 58 23 chr20 11792763 11793108 -54874897 - L3 LINE CR1 -576 1001 645 438 363 33 20 chr20 11793209 11793454 -54874551 - L3 LINE CR1 -926 651 404 387 0 0 0 chr20 11793803 11793846 -54874159 + (TG)n Simple_repeat Simple_repeat 2 44 0 1043 292 25 23 chr20 11793846 11794235 -54873770 - LTR16C LTR ERVL -5 486 62 324 83 0 0 chr20 11794274 11794322 -54873683 + (TG)n Simple_repeat Simple_repeat 2 49 0 247 187 107 6 chr20 11795769 11795852 -54872153 - MLT1J2 LTR MaLR 0 430 318 263 279 33 25 chr20 11798540 11798662 -54869343 - MIR SINE MIR -46 216 94 805 228 107 0 chr20 11798746 11798943 -54869062 - MER20 DNA MER1_type 0 219 2 466 227 76 0 chr20 11799377 11799509 -54868496 - LTR50 LTR ERVL -653 142 1 267 259 0 0 chr20 11799719 11799804 -54868201 + CT-rich Low_complexity Low_complexity 1 85 0 242 316 117 12 chr20 11799814 11799985 -54868020 - L1MC/D LINE L1 -2132 5676 5488 2671 149 14 0 chr20 11800268 11800690 -54867315 + MSTA LTR MaLR 1 428 0 421 291 116 30 chr20 11801234 11801502 -54866503 - L2 LINE L2 0 3313 3023 210 269 86 21 chr20 11801526 11801619 -54866386 + L2 LINE L2 3215 3313 0 21 0 0 0 chr20 11802320 11802341 -54865664 + AT_rich Low_complexity Low_complexity 1 21 0 351 0 0 0 chr20 11802688 11802727 -54865278 + (CA)n Simple_repeat Simple_repeat 2 40 0 355 274 171 27 chr20 11803704 11803850 -54864155 + MER5A DNA MER1_type 23 189 0 238 259 0 0 chr20 11804130 11804188 -54863817 + Charlie5 DNA MER1_type 23 80 -2532 3385 189 118 12 chr20 11804334 11805081 -54862924 + LTR1B LTR ERV1 1 826 0 856 238 113 89 chr20 11805407 11805902 -54862103 + MLT1H LTR MaLR 21 527 -22 308 269 88 53 chr20 11806023 11806194 -54861811 - MIR3 SINE MIR -6 202 26 191 370 71 31 chr20 11806715 11806842 -54861163 - MIR3 SINE MIR -75 133 2 21 0 0 0 chr20 11807231 11807252 -54860753 + AT_rich Low_complexity Low_complexity 1 21 0 261 218 51 64 chr20 11807301 11807379 -54860626 - MIR SINE MIR -106 156 80 790 330 47 12 chr20 11808088 11808409 -54859596 + LTR16B LTR ERVL 123 454 -10 248 322 164 34 chr20 11809234 11809380 -54858625 - MER5A DNA MER1_type -6 183 19 631 218 16 0 chr20 11809388 11809512 -54858493 - MER5A DNA MER1_type -3 186 61 17063 139 8 10 chr20 11809558 11811609 -54856396 - L1PA8A LINE L1 -5 6441 4387 2291 99 20 0 chr20 11811609 11811913 -54856092 - AluSg SINE Alu 0 310 1 17063 139 8 10 chr20 11811913 11813660 -54854345 - L1PA8A LINE L1 -2059 4387 2637 267 31 0 0 chr20 11813660 11813692 -54854313 + (TTG)n Simple_repeat Simple_repeat 2 33 0 17063 139 8 10 chr20 11813692 11814164 -54853841 - L1PA8A LINE L1 -3809 2637 2165 1788 86 4 25 chr20 11814164 11814407 -54853598 + AluY SINE Alu 65 302 -9 17063 139 8 10 chr20 11814407 11815782 -54852223 - L1PA8A LINE L1 -4281 2165 824 260 224 0 0 chr20 11815784 11815833 -54852172 - MER5A DNA MER1_type -115 74 26 1365 185 67 12 chr20 11816066 11816194 -54851811 - AluJb SINE Alu -44 268 148 396 0 0 0 chr20 11816194 11816238 -54851767 + (TTTA)n Simple_repeat Simple_repeat 4 47 0 1365 185 67 12 chr20 11816238 11816363 -54851642 - AluJb SINE Alu -164 148 1 479 237 177 8 chr20 11816898 11817041 -54850964 + MER5A DNA MER1_type 9 158 -31 2190 101 54 3 chr20 11817465 11817761 -54850244 - AluSx SINE Alu -1 311 1 1146 277 16 9 chr20 11818024 11818345 -54849660 - MLT1H LTR MaLR -215 334 12 1515 286 67 6 chr20 11818572 11819226 -54848779 + L1ME3A LINE L1 5416 6096 -74 268 291 138 22 chr20 11819303 11819476 -54848529 + MIR SINE MIR 19 211 -40 477 239 0 11 chr20 11820254 11820721 -54847284 + (CA)n Simple_repeat Simple_repeat 1 461 0 579 194 0 15 chr20 11820753 11821014 -54846991 + (CA)n Simple_repeat Simple_repeat 1 256 0 341 344 23 0 chr20 11821258 11821389 -54846616 - MIR SINE MIR -21 241 108 471 263 144 12 chr20 11822399 11822559 -54845446 - MER5A DNA MER1_type 0 189 9 890 191 12 0 chr20 11823820 11823993 -54844012 - MER5B DNA MER1_type -3 175 1 1013 193 5 24 chr20 11824473 11824685 -54843320 + MER58A DNA MER1_type 2 209 -15 1500 287 58 6 chr20 11824753 11825275 -54842730 + MLT1H LTR MaLR 1 549 0 347 284 35 64 chr20 11825621 11825762 -54842243 - L2 LINE L2 -33 3280 3144 232 177 32 16 chr20 11825815 11825877 -54842128 + (TA)n Simple_repeat Simple_repeat 1 63 0 479 309 149 23 chr20 11825914 11826257 -54841748 + L2 LINE L2 2925 3310 -3 1303 239 72 48 chr20 11828189 11828686 -54839319 + MLT1H LTR MaLR 41 549 0 249 333 13 13 chr20 11828848 11828926 -54839079 - L2 LINE L2 -61 3211 3134 701 253 6 6 chr20 11828966 11829144 -54838861 + MER5B DNA MER1_type 1 178 0 487 259 48 48 chr20 11829149 11829338 -54838667 + MER5A DNA MER1_type 1 189 0 2210 203 18 25 chr20 11829393 11829882 -54838123 - MER66B LTR ERV1 0 486 1 690 189 15 0 chr20 11830292 11830424 -54837581 - MER94 DNA DNA 0 134 1 16184 160 8 21 chr20 11830516 11834961 -54833044 + L1P3 LINE L1 1 4449 -2012 678 303 52 23 chr20 11834961 11835268 -54832737 - MLT1G LTR MaLR -260 330 15 389 245 34 7 chr20 11835932 11836079 -54831926 + L1ME1 LINE L1 6007 6157 -9 264 198 43 35 chr20 11836793 11836909 -54831096 - L1ME2 LINE L1 -10 6154 6038 306 342 74 54 chr20 11836910 11837208 -54830797 - L1 LINE L1 -1762 4384 4081 561 301 32 40 chr20 11837355 11837523 -54830482 - L1 LINE L1 -2198 3948 3780 2067 139 35 0 chr20 11837523 11837811 -54830194 - AluSx SINE Alu -14 298 1 561 301 32 40 chr20 11837811 11838047 -54829958 - L1 LINE L1 -2366 3780 3547 2082 188 78 6 chr20 11838083 11838593 -54829412 - L1MC3 LINE L1 -13 7772 7226 394 301 19 0 chr20 11838623 11838726 -54829279 + MER5A DNA MER1_type 2 106 -83 2034 158 0 0 chr20 11838759 11839051 -54828954 - AluSx SINE Alu -20 292 1 482 262 8 0 chr20 11839109 11839231 -54828774 - MER58B DNA MER1_type -10 331 209 727 191 66 38 chr20 11839241 11839284 -54828721 + MER6B DNA MER2_type 4 44 -821 2366 119 14 8 chr20 11839284 11839646 -54828359 - THE1B LTR MaLR 0 364 1 727 191 66 38 chr20 11839646 11839785 -54828220 + MER6B DNA MER2_type 44 191 -19 31 68 0 0 chr20 11839889 11839948 -54828057 + AT_rich Low_complexity Low_complexity 1 59 0 248 258 0 93 chr20 11839951 11840048 -54827957 - MER58B DNA MER1_type -234 107 20 800 183 70 93 chr20 11840125 11840470 -54827535 - LTR37A LTR ERV1 -5 421 85 654 254 45 23 chr20 11841631 11841808 -54826197 - MER5A DNA MER1_type 0 189 9 1477 245 87 37 chr20 11841970 11842558 -54825447 - MLT1E3 LTR MaLR -7 617 1 214 288 38 0 chr20 11842891 11842971 -54825034 + MIR3 SINE MIR 76 158 -50 21 0 0 0 chr20 11843278 11843299 -54824706 + AT_rich Low_complexity Low_complexity 1 21 0 588 349 79 49 chr20 11843299 11843780 -54824225 - L2 LINE L2 -28 3244 2779 1422 188 26 43 chr20 11843780 11844084 -54823921 - AluJo SINE Alu -13 299 1 588 349 79 49 chr20 11844084 11844575 -54823430 - L2 LINE L2 -493 2779 2256 427 193 47 151 chr20 11844959 11845089 -54822916 + MER5B DNA MER1_type 5 111 -67 1886 115 52 0 chr20 11845089 11845394 -54822611 - AluSx SINE Alu 0 319 1 427 193 47 151 chr20 11845394 11845454 -54822551 + MER5B DNA MER1_type 111 176 -2 268 283 242 0 chr20 11845847 11845967 -54822038 + MER5A DNA MER1_type 41 189 0 216 345 134 14 chr20 11845996 11846138 -54821867 + MER5A DNA MER1_type 24 182 -7 487 211 128 9 chr20 11846513 11846622 -54821383 + FLAM_A SINE Alu 1 122 -11 529 252 0 0 chr20 11847787 11847894 -54820111 - MER2 DNA MER2_type -237 108 2 2331 189 13 17 chr20 11847994 11848465 -54819540 + MLT2B1 LTR ERVL 4 472 -48 1580 175 68 15 chr20 11848517 11848633 -54819372 + AluSg SINE Alu 1 109 -201 2420 74 3 6 chr20 11848633 11848944 -54819061 + AluY SINE Alu 2 311 0 1580 175 68 15 chr20 11848944 11849090 -54818915 + AluSg SINE Alu 109 277 -33 324 0 0 0 chr20 11849090 11849126 -54818879 + (CA)n Simple_repeat Simple_repeat 1 36 0 228 35 0 0 chr20 11849128 11849157 -54818848 + (TA)n Simple_repeat Simple_repeat 1 29 0 27 73 0 0 chr20 11849167 11849222 -54818783 + AT_rich Low_complexity Low_complexity 1 55 0 380 177 28 50 chr20 11849272 11849453 -54818552 + (TTATA)n Simple_repeat Simple_repeat 3 179 0 36 40 0 0 chr20 11849466 11849516 -54818489 + AT_rich Low_complexity Low_complexity 1 50 0 533 234 23 100 chr20 11849536 11849835 -54818170 - Charlie4a DNA MER1_type -172 336 61 302 348 44 0 chr20 11849883 11850153 -54817852 - L1MEd LINE L1 -3316 3224 2943 381 278 36 101 chr20 11850164 11850412 -54817593 - L1MEd LINE L1 -3699 2841 2610 340 295 16 16 chr20 11850454 11850583 -54817422 + MLT1E LTR MaLR 465 593 0 278 286 62 0 chr20 11850920 11851032 -54816973 - L1MEd LINE L1 -4561 1979 1861 644 311 84 63 chr20 11851062 11851548 -54816457 - L1MEd LINE L1 -4748 1792 1307 24 53 0 0 chr20 11851681 11851719 -54816286 + AT_rich Low_complexity Low_complexity 1 38 0 1041 230 58 54 chr20 11852370 11852827 -54815178 + MER39 LTR ERV1 1 671 -36 1654 182 117 17 chr20 11853156 11853514 -54814491 + MSTD LTR MaLR 1 394 -2 4647 192 98 79 chr20 11853545 11854380 -54813625 + L1MC3 LINE L1 6256 7213 -572 262 235 12 25 chr20 11854380 11854461 -54813544 + MLT1F1 LTR MaLR 46 125 -442 4647 192 98 79 chr20 11854461 11855046 -54812959 + L1MC3 LINE L1 7213 7785 0 908 221 74 140 chr20 11855133 11855604 -54812401 - MLT1H LTR MaLR -109 440 1 198 170 19 57 chr20 11855694 11855747 -54812258 - L2 LINE L2 0 3313 3263 946 167 79 19 chr20 11855985 11856200 -54811805 - MER34 LTR ERV1 0 542 315 639 277 41 5 chr20 11856227 11856447 -54811558 - MER34 LTR ERV1 -287 255 28 744 229 21 36 chr20 11856469 11856661 -54811344 + MER5A DNA MER1_type 1 189 0 2352 109 0 0 chr20 11856714 11857026 -54810979 + AluSx SINE Alu 1 312 0 22 80 0 0 chr20 11857077 11857127 -54810878 + AT_rich Low_complexity Low_complexity 1 50 0 291 71 0 0 chr20 11857602 11857644 -54810361 + (TC)n Simple_repeat Simple_repeat 2 43 0 1649 231 135 19 chr20 11857862 11858374 -54809631 + MLT1E LTR MaLR 15 585 -8 377 266 58 7 chr20 11858386 11858540 -54809465 - MLT1J2 LTR MaLR -288 162 1 28 29 0 0 chr20 11859679 11859714 -54808291 + AT_rich Low_complexity Low_complexity 1 35 0 256 282 0 32 chr20 11860472 11860596 -54807409 - L1M4 LINE L1 -1031 5115 4996 314 335 6 6 chr20 11860657 11860821 -54807184 - L1M4 LINE L1 -1309 4837 4674 387 125 117 102 chr20 11861247 11861375 -54806630 - L1MC3 LINE L1 0 7785 7656 3559 184 47 39 chr20 11861531 11862004 -54806001 - L1MC3 LINE L1 -15 8050 7582 2295 154 22 74 chr20 11862004 11862191 -54805814 + LTR54 LTR ERV1 1 196 -314 2214 85 3 19 chr20 11862191 11862498 -54805507 - AluY SINE Alu -9 302 1 2295 154 22 74 chr20 11862498 11862848 -54805157 + LTR54 LTR ERV1 196 510 0 3559 184 47 39 chr20 11862848 11862924 -54805081 - L1MC3 LINE L1 -483 7582 7508 2491 190 45 61 chr20 11862924 11863546 -54804459 + LTR9 LTR ERV1 1 612 0 3559 184 47 39 chr20 11863546 11863944 -54804061 - L1MC3 LINE L1 -557 7508 7112 6047 213 39 18 chr20 11863956 11865478 -54802527 - L1MC3 LINE L1 -743 5683 5433 207 0 0 0 chr20 11865478 11865501 -54802504 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 6047 213 39 18 chr20 11865501 11865518 -54802487 - L1MC3 LINE L1 -993 5433 5418 * 6436 252 60 51 chr20 11865515 11867280 -54800725 - L1MC3 LINE L1 -1386 5040 3292 2482 111 56 50 chr20 11867280 11867723 -54800282 - L1PA16 LINE L1 -4 6162 5717 6436 252 60 51 chr20 11867723 11869409 -54798596 - L1MC3 LINE L1 -3134 3292 1635 351 0 0 0 chr20 11869409 11869448 -54798557 + (TG)n Simple_repeat Simple_repeat 2 40 0 6436 252 60 51 chr20 11869448 11871075 -54796930 - L1MC3 LINE L1 -4791 1635 24 234 241 0 0 chr20 11871076 11871130 -54796875 + MLT1F1 LTR MaLR 500 553 -14 256 245 157 27 chr20 11871203 11871464 -54796541 - L1M4 LINE L1 -1541 4605 4311 24 0 0 0 chr20 11871470 11871494 -54796511 + AT_rich Low_complexity Low_complexity 1 24 0 13467 95 12 32 chr20 11871550 11874372 -54793633 - L1PA7 LINE L1 0 6469 3668 3311 123 16 0 chr20 11874372 11874858 -54793147 - L1PA7 LINE L1 -5960 501 8 258 255 69 20 chr20 11874871 11874973 -54793032 - L1ME3A LINE L1 -4 6166 6060 626 211 72 0 chr20 11875013 11875193 -54792812 - L1ME3A LINE L1 -182 5988 5796 379 310 0 0 chr20 11875202 11875315 -54792690 - L1ME3A LINE L1 -341 5829 5717 225 260 39 8 chr20 11875372 11875499 -54792506 + (TA)n Simple_repeat Simple_repeat 2 132 0 1533 291 72 50 chr20 11875531 11876855 -54791150 - L1ME3A LINE L1 -1035 5111 3758 525 313 107 26 chr20 11876954 11877187 -54790818 - MIR SINE MIR -3 259 8 317 315 123 19 chr20 11877498 11877660 -54790345 - HAL1 LINE L1 -1055 1452 1274 535 271 7 14 chr20 11878197 11878341 -54789664 + MER45A DNA AcHobo 36 178 0 280 352 33 24 chr20 11878657 11878867 -54789138 + L3 LINE CR1 1247 1458 -119 302 338 81 26 chr20 11879152 11879386 -54788619 - MIR SINE MIR -15 247 1 334 302 21 10 chr20 11879543 11879639 -54788366 - MIR SINE MIR -76 186 90 566 114 0 0 chr20 11879648 11879736 -54788269 - L1MA8 LINE L1 -157 6134 6047 863 156 18 0 chr20 11879748 11879915 -54788090 + L1MA8 LINE L1 6118 6287 -4 33 25 0 0 chr20 11879933 11879973 -54788032 + AT_rich Low_complexity Low_complexity 1 40 0 22 70 0 0 chr20 11880346 11880389 -54787616 + AT_rich Low_complexity Low_complexity 1 43 0 376 311 23 38 chr20 11882407 11882539 -54785466 - MIR SINE MIR -63 145 16 377 230 10 0 chr20 11883423 11883523 -54784482 + (TA)n Simple_repeat Simple_repeat 2 102 0 30 0 0 0 chr20 11883575 11883605 -54784400 + AT_rich Low_complexity Low_complexity 1 30 0 520 279 83 57 chr20 11883864 11884129 -54783876 - MLT1H LTR MaLR -240 309 38 1692 202 108 31 chr20 11884798 11885234 -54782771 + MLT2B1 LTR ERVL 1 473 -47 2204 113 3 0 chr20 11885234 11885534 -54782471 + AluSp SINE Alu 2 302 -11 282 116 0 0 chr20 11885555 11885598 -54782407 + (CA)n Simple_repeat Simple_repeat 2 44 0 253 263 20 61 chr20 11886062 11886161 -54781844 + MIR SINE MIR 6 100 -162 2108 133 22 30 chr20 11886321 11886683 -54781322 - THE1B LTR MaLR -5 359 1 11131 100 15 6 chr20 11886683 11888250 -54779755 - THE1B-int LTR MaLR 0 1580 1 1995 162 20 26 chr20 11888250 11888602 -54779403 - THE1B LTR MaLR 0 364 15 323 287 78 0 chr20 11890161 11890290 -54777715 - L1MC4 LINE L1 0 8042 7904 397 248 29 15 chr20 11890360 11890497 -54777508 - L1MC4 LINE L1 -151 7891 7753 467 195 46 0 chr20 11890497 11890577 -54777428 - Tigger7 DNA MER2_type 0 2587 2504 322 175 0 32 chr20 11890577 11890640 -54777365 + Tigger5 DNA MER2_type 2 62 -2261 * 1615 146 4 0 chr20 11890638 11890898 -54777107 + Tigger5 DNA MER2_type 2062 2322 -1 836 98 98 35 chr20 11890898 11891069 -54776936 - Tigger7 DNA MER2_type -80 2411 2230 291 226 0 0 chr20 11891122 11891175 -54776830 + Tigger5 DNA MER2_type 1 53 -2270 * 344 200 14 14 chr20 11891149 11891219 -54776786 + Tigger5 DNA MER2_type 2254 2323 0 379 256 22 0 chr20 11891260 11891350 -54776655 + Tigger5 DNA MER2_type 2232 2323 0 568 262 84 31 chr20 11891350 11891636 -54776369 - L1MC4 LINE L1 -290 7752 7452 1652 276 72 4 chr20 11891636 11892096 -54775909 - MLT1H LTR MaLR -48 501 11 2188 62 7 11 chr20 11892436 11892708 -54775297 - AluY SINE Alu -40 271 1 185 65 32 0 chr20 11895664 11895695 -54772310 + (AATTG)n Simple_repeat Simple_repeat 3 34 0 206 274 137 14 chr20 11897374 11897447 -54770558 - L2 LINE L2 -18 3254 3173 311 307 0 0 chr20 11897660 11897735 -54770270 + MIR3 SINE MIR 124 198 -10 1379 227 89 53 chr20 11898320 11898594 -54769411 + MLT1F1 LTR MaLR 1 264 -303 444 51 0 0 chr20 11898594 11898653 -54769352 + (TG)n Simple_repeat Simple_repeat 2 60 0 1379 227 89 53 chr20 11898653 11898997 -54769008 + MLT1F1 LTR MaLR 264 563 -4 29 0 0 0 chr20 11899656 11899685 -54768320 + AT_rich Low_complexity Low_complexity 1 29 0 1832 166 55 17 chr20 11901511 11901872 -54766133 - THE1C LTR MaLR 0 375 1 217 236 6 45 chr20 11902187 11902344 -54765661 + (TA)n Simple_repeat Simple_repeat 2 152 0 2083 84 0 0 chr20 11902400 11902662 -54765343 - AluY SINE Alu -13 298 37 325 152 0 25 chr20 11902707 11902786 -54765219 + (TA)n Simple_repeat Simple_repeat 1 77 0 271 253 0 12 chr20 11904112 11904195 -54763810 + A-rich Low_complexity Low_complexity 2 83 0 1008 262 124 15 chr20 11904207 11904619 -54763386 - LTR16A1 LTR ERVL 0 457 1 239 330 114 29 chr20 11904772 11905045 -54762960 + L1ME LINE L1 5599 5894 -268 23 86 0 0 chr20 11905142 11905200 -54762805 + AT_rich Low_complexity Low_complexity 1 58 0 26 30 0 0 chr20 11905287 11905320 -54762685 + AT_rich Low_complexity Low_complexity 1 33 0 231 36 0 0 chr20 11905862 11905890 -54762115 - MLT2D LTR ERVL -272 142 115 419 289 31 0 chr20 11905958 11906117 -54761888 + MER103 DNA DNA 3 166 0 225 0 0 0 chr20 11907065 11907090 -54760915 + (T)n Simple_repeat Simple_repeat 1 25 0 719 162 35 35 chr20 11907440 11907582 -54760423 + MLT1H LTR MaLR 1 142 -407 * 1259 206 46 31 chr20 11907576 11907901 -54760104 - MLT1H LTR MaLR -180 369 40 193 236 0 55 chr20 11908238 11908293 -54759712 + MER5B DNA MER1_type 1 52 -126 180 345 35 0 chr20 11908342 11908400 -54759605 + MER5A DNA MER1_type 112 171 -18 438 245 93 22 chr20 11908506 11908645 -54759360 + MIR SINE MIR 49 197 -65 565 252 39 17 chr20 11911475 11911641 -54756364 - MIR SINE MIR -66 142 5 967 288 89 24 chr20 11912540 11912957 -54755048 - LTR16A1 LTR ERVL -13 444 1 463 223 11 0 chr20 11913329 11913423 -54754582 - MIR3 SINE MIR -10 198 104 183 80 0 0 chr20 11914583 11914608 -54753397 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 14377 230 42 34 chr20 11914846 11921563 -54746442 - L1PB4 LINE L1 -5 6853 10 1591 216 65 86 chr20 11921835 11922357 -54745648 + MLT1H LTR MaLR 3 513 -36 266 327 246 0 chr20 11922502 11922713 -54745292 + L3 LINE CR1 1190 1452 -125 555 326 99 51 chr20 11922889 11923281 -54744724 - MLT1K LTR MaLR -162 426 16 281 232 0 0 chr20 11923433 11923489 -54744516 - L2 LINE L2 -5 3308 3253 1163 71 24 30 chr20 11924198 11924367 -54743638 - AluY SINE Alu -143 168 1 2113 162 89 18 chr20 11924392 11924786 -54743219 + LTR9 LTR ERV1 1 422 -190 1650 99 0 0 chr20 11924792 11925005 -54743000 + AluSq SINE Alu 1 213 -100 719 152 18 0 chr20 11925024 11925136 -54742869 + LTR9 LTR ERV1 499 612 0 19059 164 37 15 chr20 11925259 11928620 -54739385 + L1MA3 LINE L1 15 3449 -4116 505 117 58 19 chr20 11928619 11928722 -54739283 - L1M1 LINE L1 -4938 2627 2521 * 475 174 76 7 chr20 11928723 11928867 -54739138 + L1M1 LINE L1 4557 4710 -2855 * 14066 181 28 10 chr20 11928866 11932841 -54735164 + L1MA3 LINE L1 3441 7496 -228 727 258 0 7 chr20 11932841 11933030 -54734975 - AluJb SINE Alu 0 312 137 1423 131 4 0 chr20 11933031 11933268 -54734737 + L1MA3 LINE L1 6068 6305 0 1056 343 62 18 chr20 11933304 11934025 -54733980 - L2 LINE L2 -254 3059 2312 216 0 0 0 chr20 11935174 11935198 -54732807 + (A)n Simple_repeat Simple_repeat 1 24 0 677 283 42 33 chr20 11935264 11935504 -54732501 + MLT1J1 LTR MaLR 80 321 -125 234 0 0 0 chr20 11936058 11936084 -54731921 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 1505 223 49 39 chr20 11936164 11936464 -54731541 - MLT1F LTR MaLR 0 542 235 3096 158 1 72 chr20 11936464 11937134 -54730871 - L1PA15 LINE L1 0 6165 5543 1505 223 49 39 chr20 11937134 11937241 -54730764 - MLT1F LTR MaLR -307 235 131 588 214 8 16 chr20 11937333 11937459 -54730546 - MLT1F LTR MaLR -417 125 1 1755 154 89 3 chr20 11937883 11938220 -54729785 + MER47A DNA MER2_type 1 366 0 377 350 40 7 chr20 11938316 11938449 -54729556 - MIR3 SINE MIR -51 157 20 1086 179 48 0 chr20 11939148 11939355 -54728650 - MER20 DNA MER1_type -1 218 2 211 302 0 0 chr20 11939604 11939657 -54728348 - L2 LINE L2 -9 3263 3211 481 339 61 6 chr20 11940688 11940868 -54727137 + MIR SINE MIR 20 209 -53 195 42 0 0 chr20 11940919 11940943 -54727062 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 265 156 16 16 chr20 11941031 11941095 -54726910 + (TA)n Simple_repeat Simple_repeat 2 65 0 315 193 72 12 chr20 11941095 11941178 -54726827 - L1MC4 LINE L1 -1340 6702 6615 441 378 80 0 chr20 11941255 11941480 -54726525 + MIR SINE MIR 20 262 0 495 305 23 8 chr20 11942184 11942376 -54725629 - MIR SINE MIR -28 234 40 205 306 58 50 chr20 11942442 11942563 -54725442 - MIR SINE MIR -112 150 29 1113 303 72 24 chr20 11942784 11943253 -54724752 - MLT1H LTR MaLR 0 549 58 1036 267 11 4 chr20 11944117 11944383 -54723622 + L1ME3A LINE L1 5476 5743 -427 741 223 76 5 chr20 11944377 11944574 -54723431 + L1ME3A LINE L1 5945 6155 -15 * 22 56 0 0 chr20 11945297 11945333 -54722672 + AT_rich Low_complexity Low_complexity 1 36 0 535 250 65 56 chr20 11945419 11945635 -54722370 + L1MB8 LINE L1 5704 5921 -257 1819 197 12 14 chr20 11945635 11945980 -54722025 + MLT1A1 LTR MaLR 1 344 -21 236 75 0 25 chr20 11946015 11946055 -54721950 + (TA)n Simple_repeat Simple_repeat 1 39 0 302 237 10 52 chr20 11946138 11946235 -54721770 + L1MC4 LINE L1 6611 6703 -1339 337 184 0 23 chr20 11946245 11946332 -54721673 + (TA)n Simple_repeat Simple_repeat 2 86 0 229 267 0 0 chr20 11946523 11946583 -54721422 + GA-rich Low_complexity Low_complexity 1 60 0 304 292 26 9 chr20 11948439 11948552 -54719453 + GA-rich Low_complexity Low_complexity 2 116 0 779 183 0 0 chr20 11948631 11948768 -54719237 + AluJb SINE Alu 171 307 -5 407 254 7 0 chr20 11949508 11949646 -54718359 + GA-rich Low_complexity Low_complexity 3 141 0 687 249 29 29 chr20 11952598 11952803 -54715202 + L2 LINE L2 3109 3313 0 306 182 0 0 chr20 11953739 11953805 -54714200 + (TA)n Simple_repeat Simple_repeat 2 67 0 23 0 0 0 chr20 11953967 11953990 -54714015 + AT_rich Low_complexity Low_complexity 1 23 0 322 160 13 13 chr20 11954347 11954422 -54713583 + CT-rich Low_complexity Low_complexity 1 75 0 486 175 56 7 chr20 11954773 11954916 -54713089 + L1MA2 LINE L1 3161 3310 -2836 785 203 0 0 chr20 11954918 11955076 -54712929 - L1PB2 LINE L1 -3774 2372 2215 12449 185 31 10 chr20 11955077 11955305 -54712700 + L1PB2 LINE L1 2386 2608 -3543 2493 54 0 0 chr20 11955305 11955602 -54712403 + AluY SINE Alu 1 297 -14 12449 185 31 10 chr20 11955602 11957356 -54710649 + L1PB2 LINE L1 2608 4324 -1827 231 36 0 0 chr20 11957356 11957384 -54710621 + (TC)n Simple_repeat Simple_repeat 2 29 0 369 0 0 0 chr20 11957386 11957427 -54710578 + (CA)n Simple_repeat Simple_repeat 2 42 0 12449 185 31 10 chr20 11957427 11957701 -54710304 + L1PB2 LINE L1 4324 4591 -1560 1875 134 58 30 chr20 11957701 11958066 -54709939 + THE1C LTR MaLR 1 375 0 12449 185 31 10 chr20 11958066 11958548 -54709457 + L1PB2 LINE L1 4591 5062 -1089 216 0 0 0 chr20 11958548 11958572 -54709433 + (TAA)n Simple_repeat Simple_repeat 2 25 0 12449 185 31 10 chr20 11958572 11959157 -54708848 + L1PB2 LINE L1 5062 5633 -518 360 0 0 0 chr20 11959157 11959197 -54708808 + (TA)n Simple_repeat Simple_repeat 1 40 0 291 28 0 0 chr20 11959196 11959232 -54708773 + (CA)n Simple_repeat Simple_repeat 2 37 0 * 12449 185 31 10 chr20 11959197 11959582 -54708423 + L1PB2 LINE L1 5633 6138 -13 6840 170 28 18 chr20 11959592 11962484 -54705521 + L1MA2 LINE L1 3287 6304 0 21 0 0 0 chr20 11962518 11962539 -54705466 + AT_rich Low_complexity Low_complexity 1 21 0 274 288 65 14 chr20 11962874 11963013 -54704992 - HAL1 LINE L1 -921 1586 1441 325 261 70 35 chr20 11963202 11963344 -54704661 + MER5A DNA MER1_type 43 189 0 25 0 0 0 chr20 11964079 11964104 -54703901 + AT_rich Low_complexity Low_complexity 1 25 0 10572 50 10 40 chr20 11964105 11965499 -54702506 - SVA Other Other -14 1372 20 511 168 0 9 chr20 11966673 11966780 -54701225 - MER53 DNA DNA -83 106 1 605 255 19 25 chr20 11967579 11967740 -54700265 + MER63 DNA MER1_type 4 789 -273 196 354 13 0 chr20 11968533 11968612 -54699393 - L3 LINE CR1 -106 1471 1392 2507 176 30 77 chr20 11968822 11969457 -54698548 - LTR9 LTR ERV1 0 612 8 288 130 0 0 chr20 11970377 11970423 -54697582 + (GGAAA)n Simple_repeat Simple_repeat 5 50 0 444 104 0 0 chr20 11970811 11970878 -54697127 + (TA)n Simple_repeat Simple_repeat 1 67 0 249 139 0 0 chr20 11973245 11973288 -54694717 + (CATA)n Simple_repeat Simple_repeat 4 46 0 604 206 30 85 chr20 11974048 11974247 -54693758 - MER5A DNA MER1_type -1 188 1 263 301 6 103 chr20 11974837 11974993 -54693012 - L2 LINE L2 -926 2388 2248 640 316 72 65 chr20 11975055 11975114 -54692891 - L2 LINE L2 -1 3312 3255 1831 222 48 76 chr20 11975114 11975758 -54692247 - MLT1E2 LTR MaLR 0 626 1 640 316 72 65 chr20 11975758 11975809 -54692196 - L2 LINE L2 -58 3255 3206 290 25 0 25 chr20 11975809 11975849 -54692156 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1035 103 76 38 chr20 11975852 11976036 -54691969 - L1PA16 LINE L1 -13 6153 5963 640 316 72 65 chr20 11976036 11976394 -54691611 - L2 LINE L2 -108 3205 2836 494 214 0 0 chr20 11977262 11977360 -54690645 + MER58B DNA MER1_type 161 258 -83 2482 55 3 10 chr20 11977360 11977668 -54690337 + AluY SINE Alu 1 306 -5 867 133 26 26 chr20 11977668 11977819 -54690186 + AluSg/x SINE Alu 132 282 -28 262 224 60 0 chr20 11977822 11977889 -54690116 + MER58B DNA MER1_type 271 341 0 311 330 25 0 chr20 11977918 11978036 -54689969 - L2 LINE L2 -925 2389 2269 2124 108 7 7 chr20 11978521 11978817 -54689188 + AluSq SINE Alu 1 296 -17 438 361 120 37 chr20 11978844 11979653 -54688352 - L2 LINE L2 -1110 2204 1329 29 47 0 0 chr20 11980001 11980044 -54687961 + AT_rich Low_complexity Low_complexity 1 43 0 2364 100 0 3 chr20 11980572 11980882 -54687123 - AluSc SINE Alu 0 309 1 254 299 31 0 chr20 11980884 11980981 -54687024 + HAL1 LINE L1 813 912 -1595 9210 198 19 12 chr20 11981394 11984654 -54683351 + L1PA16 LINE L1 2869 6144 -22 1154 240 79 72 chr20 11984658 11985228 -54682777 + L1ME1 LINE L1 5584 6157 -9 197 353 166 36 chr20 11985544 11986147 -54681858 - L2 LINE L2 -1904 1410 730 2511 55 13 0 chr20 11987913 11988221 -54679784 + AluSx SINE Alu 1 312 0 185 290 16 32 chr20 11989324 11989386 -54678619 + L2 LINE L2 1350 1410 -1904 1628 199 23 35 chr20 11989689 11990336 -54677669 + L1M4 LINE L1 4944 5576 -598 1597 53 3 212 chr20 11992875 11993218 -54674787 - AluY SINE Alu 0 303 28 24 0 0 0 chr20 11993449 11993473 -54674532 + AT_rich Low_complexity Low_complexity 1 24 0 459 0 0 0 chr20 11994494 11994545 -54673460 + (CA)n Simple_repeat Simple_repeat 2 52 0 2190 105 0 0 chr20 11995962 11996276 -54671729 - AluSq SINE Alu 0 314 1 1358 121 0 19 chr20 11996286 11996492 -54671513 - AluSq SINE Alu -21 292 91 419 312 128 0 chr20 11996563 11996704 -54671301 - MIR SINE MIR -43 219 61 228 254 50 72 chr20 11997488 11997669 -54670336 - LTR16A LTR ERVL -120 330 154 413 335 90 32 chr20 11998194 11998570 -54669435 - LTR16B LTR ERVL -10 454 57 931 221 46 79 chr20 11998684 11998863 -54669142 - MLT1A1 LTR MaLR -8 374 191 2193 112 0 29 chr20 11998863 11999175 -54668830 - AluSx SINE Alu -7 305 3 931 221 46 79 chr20 11999175 11999395 -54668610 - MLT1A1 LTR MaLR -191 191 1 1673 185 20 7 chr20 11999558 11999855 -54668150 - AluJb SINE Alu -10 302 2 227 320 31 8 chr20 12000432 12000560 -54667445 - MER110 LTR ERV1 -36 455 325 345 248 93 50 chr20 12001019 12001180 -54666825 - HAL1b LINE L1 -435 913 746 508 263 81 19 chr20 12001250 12001410 -54666595 - MIR SINE MIR 0 262 93 307 343 85 44 chr20 12001509 12001673 -54666332 + L2 LINE L2 2912 3068 -245 2004 125 47 0 chr20 12001673 12001969 -54666036 - AluSx SINE Alu -2 310 1 307 343 85 44 chr20 12001969 12002168 -54665837 + L2 LINE L2 3068 3290 -23 723 245 70 17 chr20 12003258 12003645 -54664360 - LTR16A1 LTR ERVL 0 457 2 1321 214 152 17 chr20 12004199 12004619 -54663386 - MLT1D LTR MaLR -26 479 3 367 390 69 19 chr20 12004641 12005018 -54662987 - L2 LINE L2 -575 2739 2344 183 42 0 0 chr20 12005544 12005568 -54662437 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 241 341 15 0 chr20 12006060 12006192 -54661813 + LTR16A1 LTR ERVL 320 453 -4 2163 157 6 0 chr20 12006905 12007250 -54660755 - MER7A DNA MER2_type 0 346 2 785 194 8 0 chr20 12007540 12007664 -54660341 + MER5A DNA MER1_type 10 134 -55 242 318 16 0 chr20 12007789 12007852 -54660153 - MER5A DNA MER1_type -70 119 56 963 242 83 28 chr20 12008176 12008502 -54659503 - MER2 DNA MER2_type 0 344 1 2766 97 69 14 chr20 12008870 12009305 -54658700 - L1PA11 LINE L1 -1 6173 5715 2294 62 52 0 chr20 12009320 12009608 -54658397 - AluY SINE Alu -8 303 1 696 249 59 39 chr20 12009611 12009958 -54658047 + MLT1F LTR MaLR 38 368 -174 1258 156 25 0 chr20 12010657 12010895 -54657110 + L1M1 LINE L1 5297 5540 -760 * 4756 149 32 8 chr20 12010893 12011788 -54656217 + L1MA6 LINE L1 5384 6300 0 648 311 122 3 chr20 12012066 12012362 -54655643 - MLT1I LTR MaLR -76 333 3 1198 221 13 0 chr20 12013575 12013874 -54654131 - L1P LINE L1 -815 5331 5029 4702 121 29 4 chr20 12013876 12014645 -54653360 + L1PA16 LINE L1 5370 6157 -9 23 0 0 0 chr20 12014645 12014668 -54653337 + AT_rich Low_complexity Low_complexity 1 23 0 859 248 30 55 chr20 12015805 12016168 -54651837 + LTR16A1 LTR ERVL 16 369 -88 6448 145 26 5 chr20 12017678 12019814 -54648191 - L1MA3 LINE L1 0 6305 4123 459 305 94 21 chr20 12019930 12020237 -54647768 - L1ME LINE L1 -558 5612 5283 722 296 72 58 chr20 12020389 12020875 -54647130 - MLT1H LTR MaLR 0 549 57 297 286 90 34 chr20 12020929 12021195 -54646810 - L1ME LINE L1 -1006 5140 4860 562 236 136 27 chr20 12021774 12021994 -54646011 - LTR16B LTR ERVL 0 464 221 * 2048 205 96 22 chr20 12021993 12022452 -54645553 - MLT1D LTR MaLR -12 493 1 217 307 11 0 chr20 12022685 12022773 -54645232 + CT-rich Low_complexity Low_complexity 2 90 0 2130 126 0 3 chr20 12023078 12023380 -54644625 + AluSg1 SINE Alu 1 301 -8 3150 68 21 7 chr20 12023561 12023987 -54644018 + L1PA8 LINE L1 5736 6167 -5 198 0 0 0 chr20 12025124 12025146 -54642859 + (T)n Simple_repeat Simple_repeat 1 22 0 30 27 0 0 chr20 12025499 12025536 -54642469 + AT_rich Low_complexity Low_complexity 1 37 0 580 325 79 0 chr20 12025629 12025869 -54642136 - MIR SINE MIR 0 262 4 477 277 49 22 chr20 12026141 12026325 -54641680 - MER5A DNA MER1_type 0 189 1 262 296 56 9 chr20 12026650 12026758 -54641247 - L2 LINE L2 -8 3305 3193 285 275 38 12 chr20 12027287 12027367 -54640638 + MIR SINE MIR 60 141 -121 1221 259 39 94 chr20 12027450 12028014 -54639991 + MLT1H LTR MaLR 1 533 -16 258 81 0 0 chr20 12028437 12028474 -54639531 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 249 154 39 0 chr20 12028878 12028930 -54639075 - MADE1 DNA Mariner -24 56 3 2563 61 0 0 chr20 12029016 12029327 -54638678 + AluY SINE Alu 1 311 0 342 212 73 32 chr20 12029463 12029626 -54638379 - MLT1H LTR MaLR -10 608 431 247 266 21 32 chr20 12029751 12029845 -54638160 - MLT1H LTR MaLR -390 159 67 206 213 0 0 chr20 12031065 12031112 -54636893 + (GGGTG)n Simple_repeat Simple_repeat 5 51 0 200 200 0 20 chr20 12031924 12031974 -54636031 - L2 LINE L2 0 3313 3265 303 245 138 11 chr20 12032192 12032286 -54635719 - L2 LINE L2 -15 3298 3193 773 248 67 21 chr20 12032618 12032856 -54635149 - MLT1J2 LTR MaLR -201 249 1 769 182 122 23 chr20 12033020 12033234 -54634771 - L1MD3 LINE L1 -1 7994 7760 203 152 0 0 chr20 12033252 12033285 -54634720 + (CA)n Simple_repeat Simple_repeat 2 34 0 427 308 115 0 chr20 12033484 12033666 -54634339 - MIR SINE MIR -4 258 56 920 219 11 16 chr20 12034240 12034423 -54633582 + MER5A DNA MER1_type 1 182 -7 216 297 153 17 chr20 12034468 12034586 -54633419 + MIR SINE MIR 7 140 -122 859 219 11 11 chr20 12035256 12035434 -54632571 - LTR16C LTR ERVL 0 491 314 209 83 28 0 chr20 12035710 12035746 -54632259 + (TA)n Simple_repeat Simple_repeat 2 38 0 1776 118 4 0 chr20 12035751 12036013 -54631992 - L1PA13 LINE L1 -19 6144 5882 294 178 56 56 chr20 12036225 12036315 -54631690 + L1MD3 LINE L1 7892 7981 -14 1450 279 59 8 chr20 12036334 12036858 -54631147 + L1ME3A LINE L1 5537 6087 -83 205 292 21 0 chr20 12036938 12036986 -54631019 + L3 LINE CR1 1519 1567 -10 1433 254 91 39 chr20 12037663 12038178 -54629827 + MLT1H LTR MaLR 2 543 -6 208 182 23 0 chr20 12038349 12038393 -54629612 + (TCTA)n Simple_repeat Simple_repeat 4 48 0 1367 282 57 23 chr20 12038463 12038934 -54629071 - LTR16C LTR ERVL 0 491 5 205 211 0 18 chr20 12039136 12039193 -54628812 + (TAAA)n Simple_repeat Simple_repeat 4 59 0 321 330 26 17 chr20 12039479 12039594 -54628411 + L2 LINE L2 3197 3312 -1 243 0 0 0 chr20 12041087 12041114 -54626891 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1667 206 142 72 chr20 12041228 12041337 -54626668 + MLT1E1 LTR MaLR 1 101 -553 447 19 0 0 chr20 12041337 12041389 -54626616 + (TTATA)n Simple_repeat Simple_repeat 5 56 0 1667 206 142 72 chr20 12041389 12041890 -54626115 + MLT1E1 LTR MaLR 101 654 0 3880 267 48 28 chr20 12041962 12043739 -54624266 + L1M4 LINE L1 2517 4329 -1817 3849 261 53 49 chr20 12043746 12044920 -54623085 + L1MB3 LINE L1 11 1188 -5671 1174 165 25 0 chr20 12044926 12045126 -54622879 - MLT2B1 LTR ERVL -315 205 1 10139 227 37 32 chr20 12045204 12046750 -54621255 + L1MB3 LINE L1 2031 3568 -3423 2289 98 38 12 chr20 12046750 12047096 -54620909 - THE1A LTR MaLR 0 355 1 11677 92 5 2 chr20 12047096 12048672 -54619333 - THE1A-int LTR MaLR 0 1580 1 2524 79 35 0 chr20 12048672 12049015 -54618990 - THE1A LTR MaLR 0 355 1 10139 227 37 32 chr20 12049015 12049166 -54618839 + L1MB3 LINE L1 3568 3717 -3274 3032 121 58 10 chr20 12049166 12049647 -54618358 + MER84 LTR ERV1 1 504 -3 10139 227 37 32 chr20 12049647 12049907 -54618098 + L1MB3 LINE L1 3717 3974 -3017 1992 79 8 0 chr20 12049907 12050161 -54617844 - AluSq SINE Alu -17 296 41 10139 227 37 32 chr20 12050161 12052312 -54615693 + L1MB3 LINE L1 3974 6262 -729 1801 249 33 35 chr20 12052318 12052860 -54615145 - MER74B LTR ERVL -6 616 76 3089 182 47 16 chr20 12052876 12053304 -54614701 + L1MB3 LINE L1 6270 6730 -264 225 0 0 0 chr20 12053304 12053329 -54614676 + (CA)n Simple_repeat Simple_repeat 2 26 0 3089 182 47 16 chr20 12053329 12053603 -54614402 + L1MB3 LINE L1 6730 6994 0 207 308 0 0 chr20 12053624 12053676 -54614329 - MIR SINE MIR -206 56 5 814 215 25 104 chr20 12054600 12054916 -54613089 + MLT2C1 LTR ERVL 10 300 -97 276 352 28 0 chr20 12055173 12055281 -54612724 - LTR67 LTR ERVL -401 156 46 2340 84 0 0 chr20 12055321 12055606 -54612399 + AluSg SINE Alu 1 285 -25 677 309 36 27 chr20 12055864 12056165 -54611840 - MLT1I LTR MaLR 0 409 106 1478 68 155 14 chr20 12057611 12057818 -54610187 + AluY SINE Alu 69 304 -7 3584 99 41 2 chr20 12058890 12059423 -54608582 + MER41A LTR ERV1 1 554 0 1994 108 61 10 chr20 12061604 12061901 -54606104 - AluSx SINE Alu 0 312 1 204 213 43 0 chr20 12062075 12062122 -54605883 + T-rich Low_complexity Low_complexity 2 50 0 237 132 0 0 chr20 12062125 12062163 -54605842 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 306 223 31 46 chr20 12062717 12062847 -54605158 + (TATATG)n Simple_repeat Simple_repeat 2 129 0 2412 66 0 7 chr20 12063427 12063730 -54604275 + AluY SINE Alu 1 301 -10 315 214 0 0 chr20 12063888 12063958 -54604047 + CT-rich Low_complexity Low_complexity 3 72 0 1032 282 137 39 chr20 12063990 12065467 -54602538 + L1MC/D LINE L1 3631 5253 -893 542 234 16 0 chr20 12065499 12065623 -54602382 - MLT1D LTR MaLR -6 499 374 4408 147 16 42 chr20 12065624 12066459 -54601546 + L1MA7 LINE L1 5456 6268 -23 902 284 68 11 chr20 12066473 12066737 -54601268 - MLT1E2 LTR MaLR -143 483 205 225 0 0 0 chr20 12066742 12066767 -54601238 + (T)n Simple_repeat Simple_repeat 1 25 0 723 212 0 13 chr20 12067198 12067349 -54600656 - MLT1E2 LTR MaLR -302 203 55 332 303 76 42 chr20 12067555 12067819 -54600186 + L1MC/D LINE L1 5482 5754 -2054 757 277 136 25 chr20 12069138 12069155 -54598850 + LTR16C LTR ERVL 97 111 -380 213 65 0 0 chr20 12069155 12069186 -54598819 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 757 277 136 25 chr20 12069186 12069522 -54598483 + LTR16C LTR ERVL 111 489 -2 2782 32 0 0 chr20 12070025 12070341 -54597664 - AluYb8 SINE Alu -2 316 1 224 394 30 8 chr20 12070536 12070668 -54597337 + MER5A DNA MER1_type 54 188 -1 222 180 53 7 chr20 12073240 12073390 -54594615 + (TA)n Simple_repeat Simple_repeat 2 158 0 207 0 0 0 chr20 12073390 12073413 -54594592 + (CA)n Simple_repeat Simple_repeat 2 24 0 21 104 0 0 chr20 12074674 12074751 -54593254 + AT_rich Low_complexity Low_complexity 1 77 0 1528 209 212 9 chr20 12076349 12076798 -54591207 - MLT1F LTR MaLR 0 542 3 422 208 16 148 chr20 12077460 12077643 -54590362 + MER63 DNA MER1_type 1 785 -277 638 251 99 0 chr20 12077756 12077927 -54590078 - MER58A DNA MER1_type -1 223 36 695 261 52 93 chr20 12077973 12078437 -54589568 - LTR16A1 LTR ERVL -12 445 1 878 204 49 0 chr20 12078442 12078604 -54589401 - MER5A DNA MER1_type -4 185 16 1410 67 6 0 chr20 12079880 12080058 -54587947 + AluY SINE Alu 120 298 -13 1166 160 58 48 chr20 12080401 12080713 -54587292 - MER33 DNA MER1_type -9 315 1 209 364 68 0 chr20 12080714 12080802 -54587203 - MIR3 SINE MIR -49 159 66 860 267 5 24 chr20 12080939 12081145 -54586860 + MIR SINE MIR 3 204 -58 315 0 0 0 chr20 12081736 12081771 -54586234 + (TC)n Simple_repeat Simple_repeat 2 36 0 * 441 0 0 0 chr20 12081770 12081819 -54586186 + (TG)n Simple_repeat Simple_repeat 2 50 0 265 333 24 0 chr20 12082988 12083072 -54584933 + MIR SINE MIR 70 156 -52 303 260 0 0 chr20 12083324 12083397 -54584608 - MIR SINE MIR -19 243 171 262 364 50 0 chr20 12083433 12083573 -54584432 - LTR16C LTR ERVL 0 491 345 41202 29 21 1 chr20 12084062 12090087 -54577918 + L1HS LINE L1 5 6153 -2 201 162 0 0 chr20 12090088 12090125 -54577880 + A-rich Low_complexity Low_complexity 1 37 0 6195 133 12 9 chr20 12090127 12091317 -54576688 + L1MA4A LINE L1 5105 6301 -2 2177 142 0 0 chr20 12091317 12091626 -54576379 + AluSx SINE Alu 1 309 -3 261 366 98 6 chr20 12092287 12092451 -54575554 - MER5A DNA MER1_type -1 188 10 658 159 15 8 chr20 12093130 12093262 -54574743 + L1MB4 LINE L1 6042 6174 -6 308 263 42 55 chr20 12094246 12094420 -54573585 + MLT1I LTR MaLR 99 212 -197 313 289 53 109 chr20 12094557 12094704 -54573301 - L1MEc LINE L1 -3927 2383 2229 926 202 5 5 chr20 12094704 12094892 -54573113 - MER5A DNA MER1_type 0 189 2 313 289 53 109 chr20 12094892 12095101 -54572904 - L1MEc LINE L1 -4081 2229 2047 285 258 97 61 chr20 12095724 12096085 -54571920 - L1MEc LINE L1 -5061 1058 685 1565 199 28 20 chr20 12096092 12096449 -54571556 + MLT1A1 LTR MaLR 5 364 -1 446 226 10 0 chr20 12096516 12096618 -54571387 + MER5A DNA MER1_type 9 111 -78 289 309 32 82 chr20 12096737 12097116 -54570889 - L1MEc LINE L1 -5552 567 208 409 284 128 20 chr20 12097467 12097671 -54570334 - MIR SINE MIR -35 227 2 4064 221 71 59 chr20 12097700 12099042 -54568963 + MER52A LTR ERV1 1 1358 -397 325 284 9 9 chr20 12099814 12099923 -54568082 + GA-rich Low_complexity Low_complexity 2 110 0 21 71 0 0 chr20 12100648 12100690 -54567315 + AT_rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr20 12100690 12100710 -54567295 + (TG)n Simple_repeat Simple_repeat 2 21 0 * 483 100 0 0 chr20 12100709 12100779 -54567226 + (TA)n Simple_repeat Simple_repeat 1 70 0 240 250 58 0 chr20 12100838 12100994 -54567011 + (TA)n Simple_repeat Simple_repeat 2 166 0 30 123 0 0 chr20 12100994 12101206 -54566799 + AT_rich Low_complexity Low_complexity 1 212 0 21 36 0 0 chr20 12101353 12101381 -54566624 + AT_rich Low_complexity Low_complexity 1 28 0 687 252 78 88 chr20 12101536 12102070 -54565935 - MER34B LTR ERV1 -2 540 1 867 291 89 0 chr20 12102289 12102615 -54565390 + MLT1H LTR MaLR 1 355 -194 679 209 162 0 chr20 12103389 12103537 -54564468 - MER5A DNA MER1_type -8 181 10 496 203 203 38 chr20 12104142 12104300 -54563705 + MER5A DNA MER1_type 5 188 -1 207 235 10 92 chr20 12104433 12104531 -54563474 + MIR SINE MIR 142 231 -31 335 225 0 0 chr20 12105589 12105669 -54562336 + MER116 DNA Mariner 1 80 0 648 208 168 12 chr20 12107254 12107504 -54560501 + MER5C DNA MER1_type 1 289 -35 212 289 108 24 chr20 12107626 12107709 -54560296 - L3b LINE CR1 -115 1468 1379 4275 179 32 15 chr20 12108053 12109625 -54558380 + L1MA9 LINE L1 4382 6170 -142 342 0 0 0 chr20 12109625 12109663 -54558342 + (CA)n Simple_repeat Simple_repeat 1 38 0 4275 179 32 15 chr20 12109663 12109770 -54558235 + L1MA9 LINE L1 6170 6274 -38 24 0 0 0 chr20 12109770 12109794 -54558211 + AT_rich Low_complexity Low_complexity 1 24 0 39 50 0 0 chr20 12110649 12110709 -54557296 + AT_rich Low_complexity Low_complexity 1 60 0 323 302 99 40 chr20 12110945 12111147 -54556858 - L1ME3A LINE L1 -220 6019 5806 1584 259 159 6 chr20 12111147 12111688 -54556317 + MLT1E3 LTR MaLR 1 624 0 618 238 49 74 chr20 12111715 12112152 -54555853 - L1ME3A LINE L1 -457 5782 5346 622 276 48 81 chr20 12112302 12112631 -54555374 - L1ME3A LINE L1 -1465 4750 4412 5978 109 37 47 chr20 12112631 12113756 -54554249 - L1PA12 LINE L1 0 6168 5033 2054 119 3 7 chr20 12113756 12114049 -54553956 - AluSx SINE Alu -20 292 1 5978 109 37 47 chr20 12114049 12114105 -54553900 - L1PA12 LINE L1 -1135 5033 4993 1832 156 49 0 chr20 12114105 12114393 -54553612 - AluJb SINE Alu -10 302 1 5978 109 37 47 chr20 12114393 12114463 -54553542 - L1PA12 LINE L1 -1175 4993 4924 622 276 48 81 chr20 12114463 12114796 -54553209 - L1ME3A LINE L1 -1803 4412 4110 1423 253 0 17 chr20 12114796 12115152 -54552853 + MLT2D LTR ERVL 3 352 -62 307 71 0 0 chr20 12115219 12115261 -54552744 + MLT2D LTR ERVL 479 520 0 282 265 81 96 chr20 12115303 12115722 -54552283 - L1ME3A LINE L1 -2145 4070 3658 491 251 98 81 chr20 12116067 12116374 -54551631 - L1ME3A LINE L1 -2947 3268 2957 22 0 0 0 chr20 12117574 12117596 -54550409 + AT_rich Low_complexity Low_complexity 1 22 0 459 333 43 0 chr20 12118267 12118405 -54549600 + L2 LINE L2 3112 3255 -17 2525 63 0 13 chr20 12118897 12119212 -54548793 - AluY SINE Alu 0 311 1 663 306 80 45 chr20 12119984 12120612 -54547393 - L1MEc LINE L1 -3526 2689 2074 1352 239 5 51 chr20 12122149 12122521 -54545484 + MLT2C1 LTR ERVL 2 355 -42 243 61 0 0 chr20 12122521 12122554 -54545451 + (TG)n Simple_repeat Simple_repeat 2 34 0 1352 239 5 51 chr20 12122554 12122596 -54545409 + MLT2C1 LTR ERVL 355 397 0 1870 287 30 6 chr20 12122596 12123627 -54544378 + ERVL-C1 LTR ERVL 1 1132 -4632 813 263 33 8 chr20 12123625 12123868 -54544137 + ERVL-C1 LTR ERVL 1637 1885 -3879 * 5308 213 66 18 chr20 12123873 12125176 -54542829 + ERVL-C1 LTR ERVL 4391 5756 -8 425 167 0 0 chr20 12125176 12125248 -54542757 + MLT2C1 LTR ERVL 1 72 -325 216 322 260 14 chr20 12125371 12125517 -54542488 - MIR SINE MIR -49 213 32 32 26 0 0 chr20 12125709 12125748 -54542257 + AT_rich Low_complexity Low_complexity 1 39 0 31 26 0 0 chr20 12125877 12125915 -54542090 + AT_rich Low_complexity Low_complexity 1 38 0 193 378 22 11 chr20 12126137 12126227 -54541778 + L2 LINE L2 3190 3280 -33 214 286 48 0 chr20 12127794 12127857 -54540148 + MIR3 SINE MIR 95 160 -48 216 0 0 0 chr20 12128608 12128632 -54539373 + (T)n Simple_repeat Simple_repeat 1 24 0 856 281 89 36 chr20 12129180 12129596 -54538409 + LTR16A1 LTR ERVL 5 442 -15 705 116 174 29 chr20 12129823 12129961 -54538044 - FRAM SINE Alu -13 163 6 255 305 143 22 chr20 12129968 12130191 -54537814 - MIR SINE MIR -11 251 2 675 271 110 57 chr20 12130248 12130631 -54537374 + MER90 LTR ERV1 153 555 -20 1384 273 138 12 chr20 12130773 12131360 -54536645 - HsTC2c DNA Tc2 -67 662 2 664 234 57 139 chr20 12131925 12132378 -54535627 + LTR16A1 LTR ERVL 15 430 -27 32 43 0 0 chr20 12133341 12133387 -54534618 + AT_rich Low_complexity Low_complexity 1 46 0 996 241 9 0 chr20 12133685 12133897 -54534108 - MER58A DNA MER1_type -10 214 1 545 355 13 13 chr20 12134257 12134312 -54533693 - MIR SINE MIR -6 256 202 2237 100 0 13 chr20 12134312 12134622 -54533383 - AluSx SINE Alu -6 306 1 545 355 13 13 chr20 12134622 12134797 -54533208 - MIR SINE MIR -59 203 26 358 280 169 62 chr20 12135193 12135298 -54532707 - MIR SINE MIR -12 250 158 2252 112 13 49 chr20 12135298 12135683 -54532322 - THE1C LTR MaLR -4 371 1 358 280 169 62 chr20 12135683 12135802 -54532203 - MIR SINE MIR -104 158 2 2478 204 22 53 chr20 12136171 12136800 -54531205 + L1ME2 LINE L1 5436 6040 -124 2144 101 0 44 chr20 12136800 12137117 -54530888 - AluSx SINE Alu -9 303 1 2478 204 22 53 chr20 12137117 12137229 -54530776 + L1ME2 LINE L1 6040 6154 -10 330 277 37 49 chr20 12139488 12139702 -54528303 - MER58 DNA MER1_type -4 2416 2 239 331 65 19 chr20 12139907 12140061 -54527944 + MIR SINE MIR 53 213 -49 504 329 161 35 chr20 12140419 12141275 -54526730 + L2 LINE L2 1762 2725 -589 192 336 99 53 chr20 12141448 12141579 -54526426 + L2 LINE L2 3136 3272 0 4258 159 28 11 chr20 12142469 12143350 -54524655 + L1MC2 LINE L1 5186 6082 -262 1253 132 9 23 chr20 12143350 12143569 -54524436 + L1MC1 LINE L1 6117 6333 0 674 195 65 12 chr20 12143590 12143759 -54524246 + LTR16A1 LTR ERVL 280 457 0 1258 213 146 29 chr20 12144025 12144476 -54523529 - MLT1D LTR MaLR 0 505 2 2096 85 0 0 chr20 12144508 12144798 -54523207 - AluSx SINE Alu 0 311 22 200 194 0 0 chr20 12144974 12145010 -54522995 - MIR SINE MIR -108 154 119 511 320 39 0 chr20 12145891 12146072 -54521933 + MER5A DNA MER1_type 1 188 -1 833 217 46 6 chr20 12146081 12146256 -54521749 - MER5A DNA MER1_type 0 189 8 21 36 0 0 chr20 12146329 12146357 -54521648 + AT_rich Low_complexity Low_complexity 1 28 0 27 49 0 0 chr20 12148034 12148075 -54519930 + AT_rich Low_complexity Low_complexity 1 41 0 558 224 100 60 chr20 12148440 12148739 -54519266 - LTR16A1 LTR ERVL 0 457 147 1600 214 55 94 chr20 12149023 12149236 -54518769 - MLT1H LTR MaLR 0 549 329 2192 94 28 3 chr20 12149236 12149523 -54518482 + AluSp SINE Alu 11 304 -9 1600 214 55 94 chr20 12149523 12149832 -54518173 - MLT1H LTR MaLR -220 329 47 281 26 26 0 chr20 12150152 12150190 -54517815 + (TG)n Simple_repeat Simple_repeat 2 40 0 539 214 60 12 chr20 12150494 12150662 -54517343 + MER104 DNA MER2_type 4 179 -1 2332 98 0 13 chr20 12151157 12151464 -54516541 + AluSg1 SINE Alu 6 308 -1 332 277 54 31 chr20 12151828 12151958 -54516047 - MIR SINE MIR -107 155 23 221 326 22 43 chr20 12152023 12152115 -54515890 + MIR SINE MIR 59 145 -63 329 298 5 66 chr20 12152435 12152633 -54515372 - MER117 DNA MER1_type -11 186 1 239 333 99 54 chr20 12152954 12153176 -54514829 + L2 LINE L2 3020 3251 -21 40 99 0 0 chr20 12153554 12153685 -54514320 + AT_rich Low_complexity Low_complexity 1 131 0 23 0 0 0 chr20 12154357 12154380 -54513625 + AT_rich Low_complexity Low_complexity 1 23 0 841 234 16 11 chr20 12155049 12155237 -54512768 + MER5A DNA MER1_type 1 189 0 252 300 71 47 chr20 12155249 12155419 -54512586 + L2 LINE L2 1624 1797 -1517 344 288 66 38 chr20 12155422 12155634 -54512371 + L1M3c LINE L1 535 752 -5911 295 314 11 49 chr20 12155645 12155830 -54512175 + L1M3c LINE L1 1262 1439 -5214 657 231 70 70 chr20 12156218 12156467 -54511538 + L1M3c LINE L1 1439 1687 -4976 2326 91 0 7 chr20 12156467 12156763 -54511242 - AluSx SINE Alu -18 294 1 657 231 70 70 chr20 12156763 12156839 -54511166 + L1M3c LINE L1 1687 1762 -4901 216 0 0 0 chr20 12156839 12156863 -54511142 + (CA)n Simple_repeat Simple_repeat 2 25 0 657 231 70 70 chr20 12156863 12156994 -54511011 + L1M3c LINE L1 1761 1896 -4767 * 8369 242 40 44 chr20 12156988 12157873 -54510132 + L1M4c LINE L1 1200 2087 -4295 2217 73 0 21 chr20 12157873 12158159 -54509846 + AluSp SINE Alu 24 303 -10 8369 242 40 44 chr20 12158159 12159091 -54508914 + L1M4c LINE L1 2087 3021 -3361 1602 122 0 0 chr20 12159091 12159305 -54508700 + AluSq SINE Alu 5 218 -95 8369 242 40 44 chr20 12159305 12159408 -54508597 + L1M4c LINE L1 3021 3123 -3259 3868 48 27 0 chr20 12159408 12159885 -54508120 + LTR2B LTR ERV1 1 490 0 8369 242 40 44 chr20 12159885 12160568 -54507437 + L1M4c LINE L1 3123 3807 -2575 2563 56 0 0 chr20 12160568 12160874 -54507131 + AluY SINE Alu 1 306 -5 8369 242 40 44 chr20 12160874 12162154 -54505851 + L1M4c LINE L1 3807 5148 -1234 318 256 30 113 chr20 12162163 12162331 -54505674 + L2 LINE L2 3113 3266 -47 232 354 80 18 chr20 12162390 12162503 -54505502 + L2 LINE L2 2937 3056 -216 951 293 85 24 chr20 12163141 12163565 -54504440 + LTR16A1 LTR ERVL 8 457 0 784 179 0 15 chr20 12163591 12163725 -54504280 + FLAM_C SINE Alu 1 132 -1 210 91 0 0 chr20 12164564 12164597 -54503408 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 241 304 78 0 chr20 12164826 12164941 -54503064 + L1MC/D LINE L1 5759 5882 -1926 189 147 0 0 chr20 12165071 12165105 -54502900 + (CATATA)n Simple_repeat Simple_repeat 5 38 0 2102 72 41 31 chr20 12165219 12165511 -54502494 - AluY SINE Alu -16 295 1 299 436 0 0 chr20 12166743 12166906 -54501099 - MIR3 SINE MIR -13 195 33 1949 98 16 0 chr20 12167067 12167321 -54500684 - AluSq SINE Alu -55 258 1 608 243 104 5 chr20 12167424 12167713 -54500292 + LTR16A1 LTR ERVL 55 402 -55 2429 184 26 39 chr20 12168319 12168890 -54499115 + MLT2B3 LTR ERVL 1 515 0 603 280 23 23 chr20 12169128 12169303 -54498702 + MER5B DNA MER1_type 4 178 0 314 292 0 0 chr20 12169531 12169596 -54498409 + L2 LINE L2 3249 3313 0 397 254 212 0 chr20 12170012 12170130 -54497875 + MER5A DNA MER1_type 47 189 0 352 325 54 80 chr20 12170787 12171248 -54496757 + L1M4c LINE L1 1040 1488 -4896 30 83 0 0 chr20 12171623 12171695 -54496310 + AT_rich Low_complexity Low_complexity 1 72 0 510 334 67 26 chr20 12172122 12172583 -54495422 + L1M4c LINE L1 2367 2846 -3536 242 349 42 21 chr20 12172739 12172980 -54495025 + L1M4c LINE L1 3024 3269 -3113 356 335 36 23 chr20 12173060 12173281 -54494724 + L1M4c LINE L1 3389 3612 -2770 180 0 0 0 chr20 12173808 12173828 -54494177 + (CA)n Simple_repeat Simple_repeat 1 20 0 481 232 136 34 chr20 12174167 12174344 -54493661 - MLT1H LTR MaLR -15 534 340 826 303 54 4 chr20 12174480 12174757 -54493248 - MLT1H LTR MaLR -245 304 14 1117 236 75 96 chr20 12175115 12175585 -54492420 - LTR16C LTR ERVL -2 489 30 296 284 0 12 chr20 12175886 12175967 -54492038 + L2 LINE L2 3234 3313 0 421 245 10 0 chr20 12176457 12176555 -54491450 - L1ME3A LINE L1 -5 6165 6067 217 262 83 36 chr20 12176998 12177082 -54490923 + L2 LINE L2 3221 3308 -5 24485 165 12 25 chr20 12179422 12185480 -54482525 + L1PA10 LINE L1 496 6481 -2 293 330 102 35 chr20 12187097 12187382 -54480623 + L2 LINE L2 2562 2865 -449 623 313 48 40 chr20 12187669 12187918 -54480087 + MLT1J2 LTR MaLR 50 300 -150 218 367 0 0 chr20 12187987 12188047 -54479958 + L2 LINE L2 3195 3254 -18 2107 103 0 40 chr20 12188231 12188531 -54479474 + AluSg SINE Alu 3 290 -20 273 295 39 47 chr20 12188693 12188822 -54479183 + MIR SINE MIR 27 154 -108 482 353 59 8 chr20 12189257 12189495 -54478510 + MIR SINE MIR 5 254 -8 299 311 49 60 chr20 12189825 12190801 -54477204 - L1M4 LINE L1 -1440 4706 3742 650 299 168 38 chr20 12190984 12192090 -54475915 - L1M4 LINE L1 -2682 3464 2215 329 250 42 0 chr20 12192664 12192760 -54475245 + MIR SINE MIR 83 182 -80 2031 95 0 4 chr20 12192901 12193218 -54474787 - AluSc SINE Alu 0 356 41 429 253 170 11 chr20 12193489 12193676 -54474329 + MIR SINE MIR 50 262 0 766 206 83 89 chr20 12197219 12197545 -54470460 - MER5C DNA MER1_type 0 324 1 1987 122 26 3 chr20 12198108 12198412 -54469593 + AluSq SINE Alu 1 311 -2 684 56 0 0 chr20 12198427 12198516 -54469489 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 349 329 29 15 chr20 12198864 12199001 -54469004 + MER117 DNA MER1_type 36 174 -23 399 324 39 11 chr20 12199268 12199450 -54468555 - MIR3 SINE MIR -3 205 19 186 321 104 28 chr20 12199461 12199567 -54468438 - L2 LINE L2 -794 2520 2407 379 251 2 16 chr20 12199684 12199795 -54468210 - MLT1I LTR MaLR -2 424 320 503 205 33 16 chr20 12199856 12199978 -54468027 - MLT1I LTR MaLR -231 178 55 246 136 0 0 chr20 12200587 12200631 -54467374 + (A)n Simple_repeat Simple_repeat 1 44 0 232 270 14 0 chr20 12201160 12201234 -54466771 - L1MC/D LINE L1 -759 5585 5511 695 258 127 36 chr20 12201815 12202193 -54465812 + MER57A LTR ERV1 20 401 -2 457 310 42 15 chr20 12202374 12202706 -54465299 - L1MEd LINE L1 -3573 2556 2216 21 36 0 0 chr20 12203206 12203234 -54464771 + AT_rich Low_complexity Low_complexity 1 28 0 755 274 105 21 chr20 12203256 12203869 -54464136 - L1MEd LINE L1 -4655 1655 970 968 138 62 5 chr20 12204179 12204403 -54463602 + MER33 DNA MER1_type 53 289 -35 261 276 16 24 chr20 12204535 12204658 -54463347 - L1MEd LINE L1 -5289 830 709 434 302 13 13 chr20 12204827 12204986 -54463019 - L1ME3A LINE L1 -1 6169 6011 342 0 0 0 chr20 12204990 12205028 -54462977 + (TG)n Simple_repeat Simple_repeat 2 39 0 217 229 21 0 chr20 12205366 12205414 -54462591 + GA-rich Low_complexity Low_complexity 2 50 0 307 288 96 16 chr20 12205441 12205691 -54462314 + L1ME4a LINE L1 5754 6023 -98 594 253 93 0 chr20 12206442 12206592 -54461413 + MER5A DNA MER1_type 25 188 -1 2050 80 91 14 chr20 12207128 12207415 -54460590 + AluSp SINE Alu 3 311 -2 1957 183 8 11 chr20 12207700 12208066 -54459939 - MLT1A1 LTR MaLR 0 365 1 537 306 128 26 chr20 12208270 12208574 -54459431 - MLT1H LTR MaLR -214 335 1 594 301 92 68 chr20 12208575 12209043 -54458962 + L2 LINE L2 2487 2965 -349 8754 178 28 39 chr20 12209819 12210018 -54457987 - L1MA9 LINE L1 -282 6030 5830 1932 168 0 0 chr20 12210018 12210316 -54457689 - AluJb SINE Alu -14 298 1 8754 178 28 39 chr20 12210316 12211785 -54456220 - L1MA9 LINE L1 -482 5830 4388 1723 173 92 24 chr20 12211785 12212156 -54455849 - MSTD LTR MaLR 0 396 1 8754 178 28 39 chr20 12212156 12213067 -54454938 - L1MA9 LINE L1 -1924 4388 3469 1241 124 0 40 chr20 12213084 12213285 -54454720 - AluSg/x SINE Alu 0 312 120 661 200 0 19 chr20 12213287 12213442 -54454563 - L1MA9 LINE L1 -2675 3471 3320 1216 177 52 0 chr20 12213442 12213678 -54454327 + L1MA9 LINE L1 6051 6312 0 7419 42 2 8 chr20 12213808 12215070 -54452935 - L1PA5 LINE L1 -2 6152 4894 7317 45 4 0 chr20 12215070 12215977 -54452028 + L1PA5 LINE L1 3968 4878 -1268 211 340 129 27 chr20 12216772 12216919 -54451086 - MER5B DNA MER1_type -16 162 1 1210 237 153 58 chr20 12216973 12217113 -54450892 - MLT1H LTR MaLR -2 547 422 2029 157 97 40 chr20 12217113 12217214 -54450791 + MSTA LTR MaLR 4 98 -330 2059 120 0 44 chr20 12217214 12217531 -54450474 - AluY SINE Alu -8 303 1 2029 157 97 40 chr20 12217531 12217831 -54450174 + MSTA LTR MaLR 98 428 0 1210 237 153 58 chr20 12217831 12218188 -54449817 - MLT1H LTR MaLR -127 422 3 569 287 11 55 chr20 12218922 12219103 -54448902 - MER5B DNA MER1_type 0 178 6 187 256 115 39 chr20 12219126 12219204 -54448801 - L2 LINE L2 -1 3271 3188 402 342 88 9 chr20 12219821 12220049 -54447956 + L1ME LINE L1 230 475 -5595 614 266 70 56 chr20 12220053 12220538 -54447467 + L1ME LINE L1 383 874 -5196 324 256 12 54 chr20 12220542 12220661 -54447344 + L1ME LINE L1 2395 2507 -3573 2065 132 27 128 chr20 12220661 12221137 -54446868 - MSTA LTR MaLR 0 428 1 324 256 12 54 chr20 12221137 12221185 -54446820 + L1ME LINE L1 2507 2555 -3525 249 292 0 31 chr20 12221187 12221283 -54446722 + L1ME LINE L1 2621 2713 -3367 777 137 0 0 chr20 12221287 12221411 -54446594 + THE1B LTR MaLR 1 124 -240 279 0 0 0 chr20 12221903 12221934 -54446071 + (CA)n Simple_repeat Simple_repeat 1 31 0 297 0 0 0 chr20 12222074 12222107 -54445898 + (CA)n Simple_repeat Simple_repeat 2 34 0 818 165 45 5 chr20 12222295 12222495 -54445510 + L1MA7 LINE L1 6082 6289 -2 352 242 54 72 chr20 12222548 12222771 -54445234 + L1ME3A LINE L1 5948 6166 -4 444 367 33 60 chr20 12223260 12223628 -54444377 - L2 LINE L2 -4 3268 2911 3182 148 51 33 chr20 12223666 12224273 -54443732 - LTR35 LTR ERV1 0 618 1 465 235 110 71 chr20 12224333 12224588 -54443417 + LTR16A1 LTR ERVL 3 267 -190 2433 50 0 0 chr20 12224891 12225217 -54442788 + AluY SINE Alu 1 326 0 1053 272 97 52 chr20 12225440 12225954 -54442051 - MLT1H LTR MaLR 0 549 13 1998 139 14 6 chr20 12226676 12227021 -54440984 + LTR49 LTR ERV1 1 348 -247 1174 289 73 145 chr20 12227526 12227967 -54440038 + L2 LINE L2 95 566 -2748 1771 144 28 7 chr20 12227967 12228251 -54439754 - AluJb SINE Alu -11 301 12 1174 289 73 145 chr20 12228251 12228864 -54439141 + L2 LINE L2 566 1221 -2093 1500 156 21 64 chr20 12228864 12229146 -54438859 + AluJb SINE Alu 28 297 -15 402 21 0 0 chr20 12229153 12229200 -54438805 + (CA)n Simple_repeat Simple_repeat 2 48 0 1174 289 73 145 chr20 12229200 12229417 -54438588 + L2 LINE L2 1227 1458 -1856 230 213 0 0 chr20 12229417 12229464 -54438541 - MLT1I LTR MaLR -263 146 100 1174 289 73 145 chr20 12229464 12230999 -54437006 + L2 LINE L2 1458 2752 -562 894 206 123 4 chr20 12231000 12231228 -54436777 - MLT1G LTR MaLR 0 590 336 1883 218 64 57 chr20 12231249 12231810 -54436195 + L1MCb LINE L1 413 975 -5124 438 53 0 0 chr20 12231810 12231867 -54436138 + (CA)n Simple_repeat Simple_repeat 2 58 0 1883 218 64 57 chr20 12231867 12232144 -54435861 + L1MCb LINE L1 975 1248 -4851 * 3089 200 27 20 chr20 12232143 12233030 -54434975 + L1MC3 LINE L1 5055 5403 -743 2171 153 18 10 chr20 12233035 12233422 -54434583 + MLT1B LTR MaLR 1 390 0 189 0 0 0 chr20 12233428 12233449 -54434556 + (A)n Simple_repeat Simple_repeat 1 21 0 1279 238 80 10 chr20 12233595 12233894 -54434111 - MER21B LTR ERV1 -524 339 20 1886 146 33 3 chr20 12233908 12234237 -54433768 + MER2 DNA MER2_type 7 345 0 210 300 0 0 chr20 12234270 12234320 -54433685 - MIR SINE MIR -41 221 172 3497 169 15 7 chr20 12234483 12235097 -54432908 - LTR31 LTR ERV1 0 619 1 1294 220 7 17 chr20 12235148 12235444 -54432561 - LTR51 LTR ERV1 -154 517 225 180 169 119 51 chr20 12235702 12235761 -54432244 - MIR SINE MIR -97 165 103 1675 193 0 7 chr20 12236026 12236327 -54431678 - AluJb SINE Alu -13 299 1 789 250 53 13 chr20 12237120 12237348 -54430657 + LTR16A1 LTR ERVL 221 457 0 184 309 32 21 chr20 12237348 12237442 -54430563 - MIR SINE MIR -117 145 51 2245 257 77 26 chr20 12237601 12238557 -54429448 + L2 LINE L2 2299 3308 -5 235 281 0 0 chr20 12238714 12238771 -54429234 + (CA)n Simple_repeat Simple_repeat 2 58 0 2393 119 0 0 chr20 12241028 12241340 -54426665 + AluSx SINE Alu 1 312 0 24 0 0 0 chr20 12241589 12241613 -54426392 + AT_rich Low_complexity Low_complexity 1 24 0 2097 121 7 0 chr20 12241708 12242006 -54425999 - AluSx SINE Alu -11 301 2 24 0 0 0 chr20 12243065 12243089 -54424916 + AT_rich Low_complexity Low_complexity 1 24 0 723 205 152 0 chr20 12243594 12243745 -54424260 - MER5A DNA MER1_type -6 183 10 233 170 6 39 chr20 12243814 12243875 -54424130 + Charlie5 DNA MER1_type 2327 2412 -200 3765 180 19 12 chr20 12243876 12244678 -54423327 - L1MB7 LINE L1 -31 6153 5347 2542 164 40 31 chr20 12244690 12245269 -54422736 - L1MC3 LINE L1 -1 7784 7201 310 220 113 81 chr20 12245280 12245324 -54422681 - L1MD3 LINE L1 -957 7038 6997 2420 176 31 0 chr20 12245324 12245739 -54422266 - MSTA LTR MaLR 0 428 1 310 220 113 81 chr20 12245739 12245880 -54422125 - L1MD3 LINE L1 -998 6997 6847 1218 189 90 43 chr20 12245911 12246234 -54421771 - L1MC3 LINE L1 -1070 6715 6378 2651 223 67 43 chr20 12246350 12247381 -54420624 + L1ME1 LINE L1 5042 6087 -79 1242 231 101 42 chr20 12247381 12247858 -54420147 + MLT1D LTR MaLR 1 505 0 2651 223 67 43 chr20 12247858 12247922 -54420083 + L1ME1 LINE L1 6087 6148 -18 274 151 0 19 chr20 12247931 12247984 -54420021 + Charlie5 DNA MER1_type 2567 2618 0 2103 107 0 4 chr20 12248928 12249209 -54418796 - AluSg SINE Alu -30 280 1 217 254 237 0 chr20 12249812 12249926 -54418079 - MIR SINE MIR -25 237 97 3173 152 11 32 chr20 12249932 12250238 -54417767 - L1MB7 LINE L1 -9 6175 5864 185 0 40 0 chr20 12250238 12250263 -54417742 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 2185 93 0 0 chr20 12250267 12250547 -54417458 - AluY SINE Alu -31 280 1 3173 152 11 32 chr20 12250547 12250854 -54417151 - L1MB7 LINE L1 -323 5861 5570 2079 247 53 93 chr20 12250854 12252184 -54415821 - L1M4 LINE L1 -5098 1444 168 195 250 0 0 chr20 12252340 12252388 -54415617 + MIR SINE MIR 185 232 -30 2625 186 20 15 chr20 12253600 12254137 -54413868 + MER67A LTR ERV1 4 543 0 487 324 94 9 chr20 12254409 12254622 -54413383 - MIR SINE MIR -2 260 30 240 167 0 0 chr20 12255133 12255181 -54412824 + GA-rich Low_complexity Low_complexity 3 50 0 1184 203 44 70 chr20 12255449 12255848 -54412157 + MLT1B LTR MaLR 1 465 -2 300 193 60 36 chr20 12256740 12256823 -54411182 + MLT1G LTR MaLR 25 109 -446 * 809 261 28 21 chr20 12256818 12257109 -54410896 + MLT1G LTR MaLR 298 590 0 1950 262 18 77 chr20 12257109 12257597 -54410408 - L2 LINE L2 -671 2643 2215 2370 176 25 59 chr20 12257597 12258120 -54409885 - LTR10B LTR ERV1 0 505 1 1950 262 18 77 chr20 12258120 12258401 -54409604 - L2 LINE L2 -1099 2215 1919 215 294 0 44 chr20 12258428 12258496 -54409509 - L2 LINE L2 -19 3294 3230 454 303 216 10 chr20 12258523 12258731 -54409274 - MIR SINE MIR -1 261 11 25 31 0 0 chr20 12258871 12258903 -54409102 + AT_rich Low_complexity Low_complexity 1 32 0 1395 208 0 54 chr20 12258933 12259227 -54408778 - AluJo SINE Alu -30 282 5 271 258 110 49 chr20 12260101 12260264 -54407741 + Charlie8 DNA MER1_type 2 174 -2243 1055 291 112 13 chr20 12261229 12261724 -54406281 - MLT1G1 LTR MaLR -3 592 5 1439 110 55 5 chr20 12261726 12261945 -54406060 + MER30 DNA MER1_type 1 230 0 604 252 126 18 chr20 12262423 12262645 -54405360 + MIR SINE MIR 16 261 -1 532 292 99 26 chr20 12262872 12263105 -54404900 + MIR SINE MIR 11 260 -2 214 136 17 51 chr20 12263244 12263303 -54404702 + CT-rich Low_complexity Low_complexity 3 59 0 513 324 61 27 chr20 12263663 12264104 -54403901 - L1M4 LINE L1 -1346 4800 4345 1098 293 91 0 chr20 12264517 12264903 -54403102 + LTR16C LTR ERVL 71 491 0 254 273 140 28 chr20 12265014 12265157 -54402848 + L2 LINE L2 2933 3091 -181 707 256 153 32 chr20 12265180 12265695 -54402310 + MLT1H LTR MaLR 1 595 0 403 252 161 39 chr20 12266635 12266865 -54401140 + MIR SINE MIR 5 262 0 984 150 67 0 chr20 12270721 12270914 -54397091 + L1MB3 LINE L1 5971 6176 -7 311 211 0 0 chr20 12271069 12271126 -54396879 + MIR SINE MIR 85 141 -121 197 291 10 0 chr20 12272035 12272138 -54395867 + CT-rich Low_complexity Low_complexity 1 104 0 306 273 18 43 chr20 12273069 12273189 -54394816 - MIR SINE MIR -81 127 10 1036 291 71 8 chr20 12273824 12274202 -54393803 + LTR16C LTR ERVL 90 491 0 1860 191 41 59 chr20 12274651 12275079 -54392926 - MLT1D LTR MaLR -2 503 84 1541 148 7 10 chr20 12275079 12275369 -54392636 - L1MA8 LINE L1 -6 6285 5997 1860 191 41 59 chr20 12275369 12275452 -54392553 - MLT1D LTR MaLR -421 84 1 2072 259 34 21 chr20 12275636 12276200 -54391805 - L1ME3A LINE L1 -13 6157 5581 1787 146 60 30 chr20 12276200 12276564 -54391441 + THE1C LTR MaLR 1 375 0 2072 259 34 21 chr20 12276564 12276701 -54391304 - L1ME3A LINE L1 -589 5581 5447 329 203 14 0 chr20 12276728 12276802 -54391203 - L1ME2 LINE L1 -10 6154 6080 679 246 33 24 chr20 12277962 12278173 -54389832 - MLT1J2 LTR MaLR -237 213 1 207 0 0 0 chr20 12279352 12279375 -54388630 + (T)n Simple_repeat Simple_repeat 1 23 0 2463 75 3 0 chr20 12279500 12279808 -54388197 + AluY SINE Alu 1 309 -2 229 183 17 113 chr20 12280142 12280257 -54387748 + LTR37A LTR ERV1 90 193 -233 454 199 50 84 chr20 12280474 12280736 -54387269 + LTR37B LTR ERV1 212 464 -4 257 289 60 78 chr20 12280797 12281015 -54386990 - MIR SINE MIR -30 232 19 1663 172 18 7 chr20 12281154 12281439 -54386566 - AluJb SINE Alu -24 288 1 225 111 0 48 chr20 12281470 12281533 -54386472 + (CAAAA)n Simple_repeat Simple_repeat 1 60 0 918 207 86 9 chr20 12282173 12282405 -54385600 - L1ME3A LINE L1 -113 6057 5808 363 44 0 0 chr20 12282474 12282519 -54385486 + (CA)n Simple_repeat Simple_repeat 2 46 0 3994 170 32 35 chr20 12283009 12284097 -54383908 - L1MB8 LINE L1 -1 6177 5098 389 230 18 44 chr20 12284757 12284870 -54383135 + MIR SINE MIR 83 192 -70 251 188 16 62 chr20 12285037 12285101 -54382904 + MIR SINE MIR 157 217 -45 405 211 26 0 chr20 12285364 12285440 -54382565 + MIR SINE MIR 44 121 -87 502 263 68 10 chr20 12285759 12285964 -54382041 - L1ME3A LINE L1 -10 6160 5944 247 284 128 0 chr20 12286058 12286160 -54381845 + L1MC4a LINE L1 5547 5661 -460 357 185 0 5 chr20 12286642 12286730 -54381275 + L1MA4 LINE L1 6091 6175 -116 334 309 17 11 chr20 12286939 12287120 -54380885 + L1MC4a LINE L1 5728 5909 -1899 2144 112 0 7 chr20 12287313 12287639 -54380366 + AluSq SINE Alu 1 324 0 387 225 27 63 chr20 12289002 12289113 -54378892 - MIR SINE MIR -82 180 74 2146 92 7 33 chr20 12289840 12290144 -54377861 - AluY SINE Alu -15 296 1 366 200 47 35 chr20 12291830 12291915 -54376090 + MIR3 SINE MIR 115 200 -8 2166 109 0 57 chr20 12292186 12292517 -54375488 + AluSx SINE Alu 1 312 0 533 265 58 9 chr20 12292599 12292822 -54375183 + L1MA9 LINE L1 6039 6272 -40 280 305 76 9 chr20 12292993 12293098 -54374907 + MIR SINE MIR 31 142 -120 385 317 69 7 chr20 12293923 12294068 -54373937 - MIR3 SINE MIR -52 156 3 376 179 84 0 chr20 12294556 12294651 -54373354 + MER3 DNA MER1_type 90 192 -17 318 188 225 0 chr20 12294811 12294891 -54373114 - MER3 DNA MER1_type -111 98 1 22 0 0 0 chr20 12294993 12295015 -54372990 + AT_rich Low_complexity Low_complexity 1 22 0 667 318 49 35 chr20 12295182 12295672 -54372333 + L1ME3A LINE L1 264 760 -5359 705 292 65 50 chr20 12295685 12296281 -54371724 + L1ME3A LINE L1 3328 3932 -2197 450 294 68 31 chr20 12296316 12297077 -54370928 + L1ME3A LINE L1 4022 4810 -1319 948 279 77 34 chr20 12297555 12298188 -54369817 + L1ME3A LINE L1 5279 5939 -206 519 78 39 0 chr20 12298624 12298701 -54369304 - MADE1 DNA Mariner 0 80 1 474 18 0 0 chr20 12298791 12298846 -54369159 + (TC)n Simple_repeat Simple_repeat 2 56 0 324 0 0 0 chr20 12298845 12298881 -54369124 + (TG)n Simple_repeat Simple_repeat 1 36 0 * 311 278 149 10 chr20 12298939 12299248 -54368757 + HAL1 LINE L1 996 1347 -1160 1224 87 0 0 chr20 12299428 12299649 -54368356 + (TCCA)n Simple_repeat Simple_repeat 1 221 0 368 322 58 44 chr20 12299846 12300051 -54367954 - L1MC4a LINE L1 -1875 5933 5726 1596 238 69 47 chr20 12301123 12301758 -54366247 - L1ME2 LINE L1 -30 6134 5486 204 272 87 86 chr20 12301899 12302189 -54365816 + L2 LINE L2 2732 3035 -237 187 255 0 0 chr20 12302363 12302410 -54365595 + L2 LINE L2 3226 3272 0 422 143 0 0 chr20 12302779 12302849 -54365156 - Charlie1b DNA MER1_type 0 523 454 1041 194 74 19 chr20 12302876 12303134 -54364871 - Charlie1b DNA MER1_type -251 272 1 1532 236 111 36 chr20 12303490 12304202 -54363803 + MER20B DNA MER1_type 6 770 -13 7266 162 7 9 chr20 12304355 12306840 -54361165 + L1PB1 LINE L1 3673 6151 0 4775 115 5 8 chr20 12306841 12307579 -54360426 + L1PA13 LINE L1 5428 6163 0 333 296 140 22 chr20 12307999 12308178 -54359827 + MIR SINE MIR 20 219 -43 2053 121 45 0 chr20 12309440 12309730 -54358275 - AluSx SINE Alu -7 305 3 1661 199 169 5 chr20 12309763 12310200 -54357805 - LTR22 LTR ERVK 0 509 1 194 257 229 19 chr20 12310853 12310958 -54357047 + MIR SINE MIR 94 220 -42 417 263 30 0 chr20 12312584 12312717 -54355288 + L1ME3A LINE L1 6027 6163 -7 1188 246 133 27 chr20 12313714 12314158 -54353847 + LTR16C LTR ERVL 1 491 0 1355 210 123 22 chr20 12314253 12314610 -54353395 + MSTD LTR MaLR 1 393 -3 21 36 0 0 chr20 12315420 12315448 -54352557 + AT_rich Low_complexity Low_complexity 1 28 0 340 233 56 11 chr20 12316886 12316976 -54351029 + MIR SINE MIR 123 216 -46 435 277 46 21 chr20 12317057 12317374 -54350631 + L1ME3A LINE L1 5653 5989 -181 390 263 0 0 chr20 12318059 12318139 -54349866 - L2 LINE L2 0 3272 3193 2588 113 78 11 chr20 12318997 12319337 -54348668 - L1PB1 LINE L1 -2 6149 5770 324 0 0 0 chr20 12319337 12319373 -54348632 + (TA)n Simple_repeat Simple_repeat 1 36 0 2588 113 78 11 chr20 12319373 12319482 -54348523 - L1PB1 LINE L1 -381 5770 5670 282 333 9 9 chr20 12320040 12320148 -54347857 + MER5C DNA MER1_type 16 123 -201 4263 146 62 10 chr20 12320921 12321732 -54346273 + L1MA4A LINE L1 5440 6292 -11 24 0 0 0 chr20 12321737 12321761 -54346244 + AT_rich Low_complexity Low_complexity 1 24 0 203 32 65 0 chr20 12321995 12322026 -54345979 + (CATATA)n Simple_repeat Simple_repeat 2 34 0 3152 176 54 112 chr20 12322028 12322207 -54345798 + MER21A LTR ERV1 26 214 -717 1682 15 0 20 chr20 12322207 12322408 -54345597 + AluY SINE Alu 108 304 -7 3152 176 54 112 chr20 12322408 12323172 -54344833 + MER21A LTR ERV1 214 914 -17 208 275 170 35 chr20 12323281 12323452 -54344553 + MER5C DNA MER1_type 128 321 -3 21 0 0 0 chr20 12323851 12323872 -54344133 + AT_rich Low_complexity Low_complexity 1 21 0 2297 126 0 18 chr20 12323872 12324253 -54343752 - L1PB1 LINE L1 -1 6150 5777 210 191 0 0 chr20 12324263 12324305 -54343700 + (CATATA)n Simple_repeat Simple_repeat 1 42 0 3403 162 13 6 chr20 12324312 12325498 -54342507 - L1PB1 LINE L1 -369 5782 4586 * 5611 202 9 30 chr20 12325494 12325654 -54342351 + L1M4c LINE L1 2323 2485 -3897 6266 28 3 1 chr20 12325654 12326423 -54341582 + L1PA3 LINE L1 5409 6155 0 5611 202 9 30 chr20 12326423 12327707 -54340298 + L1M4c LINE L1 2485 3735 -2647 29 28 0 0 chr20 12328537 12328573 -54339432 + AT_rich Low_complexity Low_complexity 1 36 0 465 236 45 19 chr20 12330080 12330237 -54337768 - LTR45 LTR ERV1 0 525 365 1758 121 23 4 chr20 12330633 12330890 -54337115 + AluSg SINE Alu 32 293 -17 1539 235 66 33 chr20 12331844 12332329 -54335676 + MER90 LTR ERV1 1 501 -113 322 283 81 0 chr20 12332757 12332856 -54335149 + L1ME1 LINE L1 1468 1574 -4968 2590 226 64 19 chr20 12332856 12333792 -54334213 + L1ME1 LINE L1 5684 6658 -6 320 93 0 0 chr20 12333829 12333872 -54334133 + Alu SINE Alu 249 291 -11 6910 177 10 10 chr20 12334251 12336723 -54331282 - L1PB1 LINE L1 0 6151 3681 657 274 20 0 chr20 12337016 12337213 -54330792 - MER58A DNA MER1_type -17 207 7 197 62 0 31 chr20 12337486 12337496 -54330509 + (CA)n Simple_repeat Simple_repeat 2 11 -21 1669 118 9 115 chr20 12337496 12337826 -54330179 + AluSp SINE Alu 1 295 -18 197 62 0 31 chr20 12337826 12337847 -54330158 + (CA)n Simple_repeat Simple_repeat 11 32 0 274 333 8 8 chr20 12338104 12338227 -54329778 + MER5C DNA MER1_type 1 123 -201 4153 154 63 6 chr20 12339011 12339823 -54328182 + L1MA4A LINE L1 5440 6297 -6 204 86 86 0 chr20 12340078 12340148 -54327857 + (TA)n Simple_repeat Simple_repeat 1 76 0 3090 170 62 130 chr20 12340148 12340714 -54327291 + MER21A LTR ERV1 9 484 -447 2186 87 0 14 chr20 12340714 12341058 -54326947 - AluY SINE Alu 0 340 1 3090 170 62 130 chr20 12341058 12341462 -54326543 + MER21A LTR ERV1 484 914 -17 230 220 119 51 chr20 12341606 12341724 -54326281 + MER5C DNA MER1_type 199 324 0 27 0 0 0 chr20 12342940 12342967 -54325038 + AT_rich Low_complexity Low_complexity 1 27 0 356 215 61 61 chr20 12344492 12344655 -54323350 - LTR45B LTR ERV1 -15 474 312 1371 104 0 0 chr20 12344871 12345053 -54322952 - AluY SINE Alu -1 310 129 2370 253 66 21 chr20 12346097 12347076 -54320929 + L1MB8 LINE L1 3786 4808 -1338 2356 237 52 18 chr20 12347145 12347870 -54320135 + L1MB8 LINE L1 5425 6174 -4 304 218 11 45 chr20 12348024 12348203 -54319802 + (TATAA)n Simple_repeat Simple_repeat 3 175 0 21 36 0 0 chr20 12349389 12349417 -54318588 + AT_rich Low_complexity Low_complexity 1 28 0 1780 233 32 9 chr20 12349924 12350361 -54317644 + MER90 LTR ERV1 3 449 -165 1352 254 8 17 chr20 12350370 12350729 -54317276 + MLT1A1 LTR MaLR 10 365 0 578 200 69 7 chr20 12350732 12350877 -54317128 + MER90 LTR ERV1 448 601 -13 * 1024 158 47 0 chr20 12350874 12351064 -54316941 + MER66A LTR ERV1 278 476 -2 494 279 96 25 chr20 12351147 12351387 -54316618 - MIR SINE MIR 0 262 6 182 266 53 44 chr20 12352398 12352511 -54315494 - MIR SINE MIR -65 143 30 3967 94 28 0 chr20 12352538 12353102 -54314903 - LTR19B LTR ERV1 0 580 1 521 306 53 36 chr20 12353339 12353640 -54314365 + MLT1L LTR MaLR 88 393 -222 280 270 56 11 chr20 12354680 12354769 -54313236 - MIR SINE MIR -50 212 120 502 316 93 9 chr20 12355510 12355725 -54312280 - MIR SINE MIR -10 252 20 2149 174 39 0 chr20 12355926 12356333 -54311672 - MSTA LTR MaLR 0 428 6 3562 147 10 2 chr20 12356338 12356923 -54311082 - MSTA-int LTR MaLR 0 1651 1062 3199 156 11 0 chr20 12356945 12357510 -54310495 - MSTA-int LTR MaLR -1080 571 1 2340 168 24 0 chr20 12357510 12357920 -54310085 - MSTA LTR MaLR 0 428 9 1039 217 61 50 chr20 12359794 12360172 -54307833 - MER66A LTR ERV1 -52 426 45 702 171 44 13 chr20 12360716 12360874 -54307131 + L1ME3A LINE L1 6008 6170 0 212 0 0 35 chr20 12360918 12360947 -54307058 + (CA)n Simple_repeat Simple_repeat 2 29 0 576 285 75 73 chr20 12361644 12362083 -54305922 - MER21B LTR ERV1 -326 537 98 331 265 23 53 chr20 12362060 12362192 -54305813 - MER77 LTR ERV1 -412 193 66 * 824 265 102 41 chr20 12362621 12363013 -54304992 + LTR16C LTR ERVL 66 481 -10 369 0 0 0 chr20 12363193 12363234 -54304771 + (TG)n Simple_repeat Simple_repeat 2 42 0 2063 105 0 14 chr20 12363610 12363921 -54304084 + AluSx SINE Alu 1 307 0 405 209 5 114 chr20 12365654 12365842 -54302163 - LTR48 LTR ERV1 0 731 484 963 153 37 161 chr20 12365905 12366283 -54301722 - LTR49 LTR ERV1 -263 332 2 323 263 37 29 chr20 12366390 12366557 -54301448 + L1ME LINE L1 5443 5612 -509 1165 99 0 0 chr20 12366559 12366711 -54301294 + AluSp/q SINE Alu 162 313 0 337 207 37 0 chr20 12366745 12366827 -54301178 + MIR SINE MIR 124 208 -54 22 0 0 0 chr20 12366990 12367012 -54300993 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr20 12367759 12367783 -54300222 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 23 33 0 0 chr20 12368204 12368234 -54299771 + AT_rich Low_complexity Low_complexity 1 30 0 1606 205 22 75 chr20 12368726 12369179 -54298826 - LTR65 LTR ERV1 -2 667 239 1239 184 24 12 chr20 12369184 12369439 -54298566 + MLT1E2 LTR MaLR 312 569 -57 1189 161 28 4 chr20 12369477 12369725 -54298280 - LTR65 LTR ERV1 -415 254 1 546 273 29 35 chr20 12369752 12369924 -54298081 - MIR SINE MIR -63 199 29 544 303 80 11 chr20 12370193 12370381 -54297624 - MIR SINE MIR -57 205 5 182 263 0 70 chr20 12370941 12370998 -54297007 + L2 LINE L2 3215 3267 -5 439 343 101 32 chr20 12371537 12372044 -54295961 - LTR67 LTR ERVL -14 543 2 406 241 14 164 chr20 12372237 12372297 -54295708 - MIR SINE MIR -13 249 182 1986 113 3 17 chr20 12372297 12372314 -54295691 - AluSg SINE Alu 0 310 294 211 37 0 0 chr20 12372314 12372341 -54295664 + (TTTTA)n Simple_repeat Simple_repeat 3 100 0 1986 113 3 17 chr20 12372341 12372623 -54295382 - AluSg SINE Alu -16 294 1 406 241 14 164 chr20 12372623 12372848 -54295157 - MIR SINE MIR -80 182 7 2226 187 83 29 chr20 12373305 12373350 -54294655 - MLT2B1 LTR ERVL 0 520 479 6764 150 51 21 chr20 12373350 12373657 -54294348 - Tigger3b DNA MER2_type -1797 1231 935 2387 78 3 19 chr20 12373657 12373966 -54294039 + AluSp SINE Alu 1 304 -9 6764 150 51 21 chr20 12373966 12374275 -54293730 - Tigger3b DNA MER2_type -2093 935 637 1825 135 4 0 chr20 12374275 12374554 -54293451 - AluSx SINE Alu 0 314 35 6764 150 51 21 chr20 12374554 12375129 -54292876 - Tigger3b DNA MER2_type -2391 637 2 2226 187 83 29 chr20 12375129 12375574 -54292431 - MLT2B1 LTR ERVL -41 479 3 3400 144 29 18 chr20 12376227 12376784 -54291221 + L1PB4 LINE L1 5583 6145 -11 225 0 48 48 chr20 12376784 12376826 -54291179 + (TTTTTG)n Simple_repeat Simple_repeat 2 43 0 1752 151 20 17 chr20 12377022 12377314 -54290691 - AluJo SINE Alu -19 293 1 808 178 0 22 chr20 12377687 12377822 -54290183 + FLAM_C SINE Alu 1 132 -1 400 238 33 25 chr20 12378807 12378929 -54289076 - L2 LINE L2 0 3313 3191 5602 147 21 32 chr20 12379283 12379320 -54288685 + L1MA9 LINE L1 5298 5334 -978 2149 113 3 0 chr20 12379320 12379611 -54288394 + AluSx SINE Alu 1 292 -20 5602 147 21 32 chr20 12379611 12380598 -54287407 + L1MA9 LINE L1 5334 6311 -1 196 143 36 0 chr20 12380600 12380656 -54287349 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 1059 242 141 44 chr20 12380661 12381176 -54286829 + MLT1F LTR MaLR 40 542 0 462 294 103 33 chr20 12381263 12381447 -54286558 - MIR SINE MIR 0 262 66 239 282 45 64 chr20 12381723 12381833 -54286172 + L2 LINE L2 3188 3295 -18 1635 127 0 26 chr20 12381906 12382174 -54285831 + Tigger7 DNA MER2_type 2225 2485 -6 248 238 79 0 chr20 12382195 12382258 -54285747 + L2 LINE L2 3201 3268 -4 334 225 132 31 chr20 12382744 12382873 -54285132 - MIR3 SINE MIR -35 173 32 1372 217 96 28 chr20 12383721 12384108 -54283897 - LTR16C LTR ERVL -8 483 71 1945 185 112 28 chr20 12384153 12384617 -54283388 - MLT1D LTR MaLR -2 503 1 240 253 83 41 chr20 12386049 12386186 -54281819 - MIR3 SINE MIR -11 197 48 438 272 52 29 chr20 12386679 12386852 -54281153 + L2 LINE L2 3096 3272 0 211 218 51 39 chr20 12387695 12387773 -54280232 + MIR3 SINE MIR 3 81 -127 357 267 98 22 chr20 12387877 12388130 -54279875 + MLT1H LTR MaLR 98 527 -22 2994 73 3 0 chr20 12388137 12388491 -54279514 - THE1A LTR MaLR 0 355 1 3164 202 99 22 chr20 12388565 12389447 -54278558 - L1ME2 LINE L1 -11 6948 6000 1192 266 60 41 chr20 12389438 12390380 -54277625 - L1ME2 LINE L1 -3603 3338 2416 * 319 225 98 46 chr20 12390396 12390569 -54277436 - L1ME2 LINE L1 -6178 245 64 1955 118 21 4 chr20 12390634 12390937 -54277068 - AluSx SINE Alu 0 308 1 194 333 0 0 chr20 12391586 12391649 -54276356 + L2 LINE L2 3209 3271 -1 355 303 94 39 chr20 12391917 12392151 -54275854 + LTR16C LTR ERVL 193 439 -52 1574 230 89 15 chr20 12392158 12392550 -54275455 + MLT1F1 LTR MaLR 147 567 0 493 354 42 0 chr20 12392657 12392894 -54275111 + MIR SINE MIR 16 262 0 3291 102 22 2 chr20 12394374 12394835 -54273170 - L1MA1 LINE L1 0 6302 5833 393 258 75 8 chr20 12395839 12395959 -54272046 - MIR SINE MIR -12 250 123 479 341 24 6 chr20 12396101 12396271 -54271734 + MIR SINE MIR 26 198 -64 188 135 27 0 chr20 12397307 12397344 -54270661 + CT-rich Low_complexity Low_complexity 2 39 0 269 319 80 55 chr20 12398278 12398441 -54269564 - MIR SINE MIR -7 255 89 205 250 204 11 chr20 12398460 12398548 -54269457 + MIR3 SINE MIR 54 158 -50 180 97 0 0 chr20 12398813 12398844 -54269161 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 207 384 20 10 chr20 12399992 12400091 -54267914 + L2 LINE L2 1495 1594 -1720 818 354 65 23 chr20 12400133 12400797 -54267208 + L2 LINE L2 1938 2629 -685 302 321 137 0 chr20 12401656 12401824 -54266181 - L3 LINE CR1 -343 1234 1044 680 35 11 0 chr20 12401886 12401973 -54266032 + (TCTA)n Simple_repeat Simple_repeat 3 90 0 367 261 22 11 chr20 12402227 12402319 -54265686 - L2 LINE L2 -12 3301 3209 21 36 0 0 chr20 12402843 12402871 -54265134 + AT_rich Low_complexity Low_complexity 1 28 0 225 200 0 0 chr20 12404615 12404655 -54263350 - L2 LINE L2 -8 3305 3266 182 105 26 0 chr20 12404789 12404827 -54263178 + CT-rich Low_complexity Low_complexity 2 40 0 530 242 13 0 chr20 12404830 12404979 -54263026 + (TATATG)n Simple_repeat Simple_repeat 4 154 0 204 40 0 0 chr20 12404979 12405004 -54263001 + (CA)n Simple_repeat Simple_repeat 2 26 0 631 282 6 24 chr20 12405809 12405979 -54262026 + MLT2F LTR ERVL 369 535 -128 378 0 0 0 chr20 12405985 12406027 -54261978 + (CA)n Simple_repeat Simple_repeat 2 43 0 465 199 397 6 chr20 12407153 12407309 -54260696 - MIR SINE MIR -23 239 23 227 224 0 0 chr20 12407578 12407627 -54260378 + L2 LINE L2 3263 3311 -2 393 283 28 35 chr20 12408625 12408770 -54259235 + MIR3 SINE MIR 40 183 -25 22 0 0 0 chr20 12409990 12410012 -54257993 + AT_rich Low_complexity Low_complexity 1 22 0 2313 279 71 16 chr20 12411099 12411947 -54256058 - L1ME3A LINE L1 0 6170 5277 419 277 0 8 chr20 12411949 12412079 -54255926 - L1ME3A LINE L1 -896 5250 5122 22 35 0 0 chr20 12412612 12412641 -54255364 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr20 12412675 12412703 -54255302 + AT_rich Low_complexity Low_complexity 1 28 0 657 347 66 20 chr20 12413894 12414303 -54253702 + LTR16B LTR ERVL 35 462 -2 1138 333 50 27 chr20 12416400 12417189 -54250816 - L2 LINE L2 -2 3311 2494 30 69 0 0 chr20 12417698 12417756 -54250249 + AT_rich Low_complexity Low_complexity 1 58 0 224 328 76 8 chr20 12417927 12418058 -54249947 + MIR SINE MIR 53 192 -70 911 204 26 87 chr20 12418218 12418449 -54249556 + MER20 DNA MER1_type 3 219 0 297 228 120 43 chr20 12418655 12418747 -54249258 + MLT1I LTR MaLR 73 171 -238 323 226 87 78 chr20 12418895 12419010 -54248995 + MLT1H LTR MaLR 421 536 -13 296 94 19 0 chr20 12419431 12419484 -54248521 + (CAAAC)n Simple_repeat Simple_repeat 1 54 0 2301 81 0 0 chr20 12420118 12420433 -54247572 + AluY SINE Alu 1 315 0 3778 198 66 23 chr20 12420496 12421111 -54246894 - L1MD1 LINE L1 -107 6529 5942 5351 93 100 13 chr20 12421111 12421871 -54246134 - LTR12 LTR ERV1 0 826 1 3778 198 66 23 chr20 12421871 12422406 -54245599 - L1MD1 LINE L1 -694 5942 5336 6647 145 19 1 chr20 12422444 12424526 -54243479 - L1PA13 LINE L1 0 6163 4055 1574 247 42 27 chr20 12424533 12425198 -54242807 - L1MD1 LINE L1 -1198 5342 4668 225 284 29 48 chr20 12425204 12425412 -54242593 - L1MD1 LINE L1 -2542 3998 3795 1842 225 35 67 chr20 12425479 12426043 -54241962 + MLT2B3 LTR ERVL 1 546 -8 2414 246 114 14 chr20 12426045 12427077 -54240928 - L1MD1 LINE L1 -2897 3643 2508 1178 241 103 0 chr20 12427059 12427407 -54240598 - L1MD1 LINE L1 -6129 411 28 * 364 330 126 5 chr20 12427425 12427631 -54240374 + MIR SINE MIR 31 261 -1 235 319 0 0 chr20 12427632 12427704 -54240301 + (TTA)n Simple_repeat Simple_repeat 2 73 0 285 303 0 0 chr20 12428851 12428917 -54239088 + MIR SINE MIR 123 188 -74 276 193 42 32 chr20 12430288 12430383 -54237622 + MIR SINE MIR 86 183 -63 267 304 14 81 chr20 12430861 12431009 -54236996 - MIR SINE MIR -14 248 111 768 272 86 13 chr20 12432267 12432499 -54235506 - MIR SINE MIR -10 252 4 305 301 0 53 chr20 12432541 12432654 -54235351 + MIR SINE MIR 128 234 -28 240 35 0 0 chr20 12432719 12432748 -54235257 + (ATG)n Simple_repeat Simple_repeat 1 29 0 223 341 119 8 chr20 12434994 12435120 -54232885 + MIR SINE MIR 21 160 -102 21 36 0 0 chr20 12435157 12435185 -54232820 + AT_rich Low_complexity Low_complexity 1 28 0 232 196 0 22 chr20 12435186 12435232 -54232773 - MIR SINE MIR -1 261 217 352 325 63 16 chr20 12435242 12435433 -54232572 - L1ME3A LINE L1 -1 6169 5970 1104 132 13 0 chr20 12435507 12435666 -54232339 - AluSg/x SINE Alu -17 295 135 441 117 0 0 chr20 12435666 12435726 -54232279 - AluSq SINE Alu -111 202 143 1460 122 0 24 chr20 12435726 12435939 -54232066 - AluSq SINE Alu -103 210 3 1317 283 50 25 chr20 12435940 12436789 -54231216 - L1ME3A LINE L1 -213 5949 5083 261 0 0 0 chr20 12437100 12437129 -54230876 + (CA)n Simple_repeat Simple_repeat 1 29 0 361 321 105 12 chr20 12437461 12437623 -54230382 - MIR3 SINE MIR -11 197 21 22 70 0 0 chr20 12437792 12437835 -54230170 + AT_rich Low_complexity Low_complexity 1 43 0 2014 229 35 43 chr20 12437851 12438479 -54229526 + L1ME3A LINE L1 5318 5940 -230 1148 216 4 13 chr20 12438485 12438716 -54229289 - MER8 DNA MER2_type 0 239 11 394 202 92 140 chr20 12438726 12438954 -54229051 + L1ME3A LINE L1 5954 6170 0 304 258 101 25 chr20 12439614 12439773 -54228232 - MIR SINE MIR -72 190 20 285 196 22 11 chr20 12440496 12440588 -54227417 + (CA)n Simple_repeat Simple_repeat 1 93 0 401 286 9 0 chr20 12440617 12440722 -54227283 + MIR SINE MIR 34 139 -123 342 324 58 10 chr20 12440872 12441079 -54226926 + L3 LINE CR1 1308 1524 -53 379 339 119 0 chr20 12441476 12441644 -54226361 + LTR16C LTR ERVL 65 252 -239 354 289 16 8 chr20 12441645 12441766 -54226239 + LTR16C LTR ERVL 367 488 -3 237 245 75 43 chr20 12441915 12442009 -54225996 + L2 LINE L2 3163 3259 -13 1012 275 33 15 chr20 12442160 12442556 -54225449 - L1ME3A LINE L1 -189 5981 5579 1331 209 74 3 chr20 12442604 12442720 -54225285 + AluJo SINE Alu 1 107 -205 513 28 56 28 chr20 12442720 12442827 -54225178 + (TA)n Simple_repeat Simple_repeat 2 111 0 1331 209 74 3 chr20 12442827 12442993 -54225012 + AluJo SINE Alu 107 303 -9 30 45 0 0 chr20 12443002 12443046 -54224959 + AT_rich Low_complexity Low_complexity 1 44 0 276 317 21 49 chr20 12443225 12443367 -54224638 - LTR16C LTR ERVL -281 210 73 24 0 0 0 chr20 12443958 12443982 -54224023 + AT_rich Low_complexity Low_complexity 1 24 0 246 62 0 0 chr20 12444830 12444862 -54223143 + (CA)n Simple_repeat Simple_repeat 1 32 0 816 200 0 0 chr20 12444863 12445008 -54222997 + MER82 DNA MER2_type 2 146 -507 1870 237 11 26 chr20 12445442 12445897 -54222108 + MER82 DNA MER2_type 200 647 -6 339 325 45 13 chr20 12446199 12446356 -54221649 + MIR SINE MIR 51 212 -50 325 280 110 0 chr20 12446525 12446625 -54221380 + MLT1I LTR MaLR 232 342 -67 196 250 136 45 chr20 12447043 12447131 -54220874 - L2 LINE L2 -300 2972 2877 532 273 91 6 chr20 12448136 12448312 -54219693 + MIR SINE MIR 72 262 0 405 228 73 49 chr20 12448308 12448431 -54219574 - MIR SINE MIR -64 198 73 * 358 323 115 38 chr20 12448617 12448982 -54219023 - L1ME2 LINE L1 -259 5905 5510 2573 47 0 0 chr20 12449234 12449531 -54218474 - AluY SINE Alu -8 303 7 230 176 33 22 chr20 12450625 12450716 -54217289 + (CATA)n Simple_repeat Simple_repeat 3 94 0 314 168 9 28 chr20 12450763 12450870 -54217135 + (CA)n Simple_repeat Simple_repeat 2 106 0 326 212 0 12 chr20 12451910 12451995 -54216010 + CT-rich Low_complexity Low_complexity 2 85 0 404 341 145 21 chr20 12452726 12453210 -54214795 + MLT1K LTR MaLR 3 546 -42 317 327 176 7 chr20 12453431 12453584 -54214421 - MER5A DNA MER1_type 0 189 11 376 230 73 79 chr20 12455907 12456085 -54211920 + MIR3 SINE MIR 32 208 0 * 769 291 90 67 chr20 12456074 12456859 -54211146 + L2 LINE L2 2471 3293 -20 1817 82 19 11 chr20 12456865 12457132 -54210873 + L1PA8A LINE L1 5835 6103 -28 830 269 61 19 chr20 12457514 12457826 -54210179 + LTR16C LTR ERVL 161 485 -6 593 284 87 29 chr20 12458015 12458223 -54209782 + MIR SINE MIR 22 241 -21 4760 174 45 21 chr20 12458795 12458861 -54209144 - L1MA9 LINE L1 -3 6309 6246 236 30 30 0 chr20 12458861 12458894 -54209111 + (TA)n Simple_repeat Simple_repeat 1 34 0 4760 174 45 21 chr20 12458894 12458948 -54209057 - L1MA9 LINE L1 -66 6246 6195 192 77 0 0 chr20 12458948 12458974 -54209031 + (TG)n Simple_repeat Simple_repeat 1 26 0 4760 174 45 21 chr20 12458974 12459958 -54208047 - L1MA9 LINE L1 -117 6195 5237 1685 168 32 0 chr20 12459958 12460238 -54207767 - AluSx SINE Alu -9 303 15 4760 174 45 21 chr20 12460238 12460356 -54207649 - L1MA9 LINE L1 -1075 5237 5123 7427 37 3 0 chr20 12460356 12461436 -54206569 + L1PA4 LINE L1 5071 6153 -2 4760 174 45 21 chr20 12461436 12461698 -54206307 - L1MA9 LINE L1 -1189 5123 4787 2182 167 56 31 chr20 12462300 12462714 -54205291 - MSTB LTR MaLR -2 424 1 439 317 25 50 chr20 12463569 12463768 -54204237 + MIR SINE MIR 66 259 -3 592 233 0 0 chr20 12464396 12464512 -54203493 + MER45A DNA AcHobo 35 150 -28 8801 190 63 16 chr20 12464832 12466718 -54201287 - L1MA4A LINE L1 -5 7000 4870 2268 57 64 0 chr20 12466718 12466999 -54201006 - AluY SINE Alu -11 300 2 8801 190 63 16 chr20 12466999 12468493 -54199512 - L1MA4A LINE L1 -2135 4870 3448 1568 128 0 9 chr20 12468495 12468713 -54199292 - AluSg/x SINE Alu -24 286 71 3194 263 99 42 chr20 12468713 12471284 -54196721 - L1MA4A LINE L1 -4083 2766 6 1945 82 0 4 chr20 12471877 12472133 -54195872 - AluY SINE Alu -1 310 56 35948 30 11 1 chr20 12472416 12478443 -54189562 + L1HS LINE L1 4 6153 -2 195 393 11 0 chr20 12478489 12478578 -54189427 + L2 LINE L2 2698 2787 -527 344 258 11 22 chr20 12478717 12478806 -54189199 + L2 LINE L2 3170 3257 -15 4620 112 3 8 chr20 12478886 12479501 -54188504 + LTR9 LTR ERV1 1 612 0 32 26 0 0 chr20 12479625 12479664 -54188341 + AT_rich Low_complexity Low_complexity 1 39 0 621 138 37 28 chr20 12479807 12479916 -54188089 + MSTC LTR MaLR 1 110 -318 2451 71 0 10 chr20 12479949 12480258 -54187747 - AluY SINE Alu -5 306 1 769 215 45 6 chr20 12480313 12480490 -54187515 + MIR SINE MIR 66 249 -13 231 36 0 0 chr20 12480492 12480520 -54187485 + (TTA)n Simple_repeat Simple_repeat 2 29 0 189 311 73 53 chr20 12481174 12481325 -54186680 - L2 LINE L2 -21 3292 3139 272 272 11 43 chr20 12482404 12482496 -54185509 + L1ME1 LINE L1 5915 6003 -163 661 191 19 19 chr20 12482498 12482660 -54185345 + L1MA10 LINE L1 6171 6332 -2 2039 101 40 3 chr20 12482669 12482967 -54185038 + AluSp SINE Alu 1 309 -4 23 33 0 0 chr20 12483099 12483129 -54184876 + AT_rich Low_complexity Low_complexity 1 30 0 2313 165 64 2 chr20 12484798 12485205 -54182800 + LTR32 LTR ERVL 6 437 -34 1469 249 50 28 chr20 12485206 12485671 -54182334 - L1ME3A LINE L1 -28 6142 5668 599 226 72 32 chr20 12485682 12485903 -54182102 - L1ME3A LINE L1 -765 5381 5152 2650 146 36 10 chr20 12486030 12486447 -54181558 + MSTA LTR MaLR 1 428 0 1269 194 115 3 chr20 12487186 12487474 -54180531 + MER33 DNA MER1_type 1 320 -4 258 81 0 0 chr20 12487573 12487610 -54180395 + (CA)n Simple_repeat Simple_repeat 2 38 0 374 246 18 9 chr20 12488126 12488236 -54179769 - MIR SINE MIR -35 227 117 2199 166 79 20 chr20 12488255 12488658 -54179347 + MSTC LTR MaLR 2 428 0 611 152 0 10 chr20 12489458 12489557 -54178448 + MER4A LTR ERV1 1 98 -566 1807 151 6 22 chr20 12489557 12489908 -54178097 + MER4A LTR ERV1 261 664 0 2246 124 32 24 chr20 12491796 12492166 -54175839 - THE1C LTR MaLR -2 373 1 1725 244 117 22 chr20 12492805 12493280 -54174725 + L1ME3A LINE L1 5535 6076 -94 417 75 194 0 chr20 12493280 12493347 -54174658 + MADE1 DNA Mariner 1 80 0 1725 244 117 22 chr20 12493347 12493452 -54174553 + L1ME3A LINE L1 6076 6170 0 251 350 29 44 chr20 12493534 12493671 -54174334 - L2 LINE L2 -2 3270 3136 393 295 92 29 chr20 12494190 12494363 -54173642 - MIR SINE MIR -44 218 35 254 256 216 51 chr20 12495061 12495315 -54172690 - MLT1H LTR MaLR -2 547 252 387 339 29 12 chr20 12495345 12495516 -54172489 - MLT1H LTR MaLR -373 176 3 686 335 27 48 chr20 12496460 12496836 -54171169 + LTR16C LTR ERVL 99 466 -25 227 369 107 13 chr20 12496875 12497184 -54170821 + L2 LINE L2 1906 2243 -1071 869 226 72 0 chr20 12497246 12497441 -54170564 + MER3 DNA MER1_type 1 209 0 316 345 111 19 chr20 12497656 12497922 -54170083 + L1M4 LINE L1 4730 5039 -1107 6504 106 11 8 chr20 12497922 12499081 -54168924 + L1PA13 LINE L1 4999 6161 -2 316 345 111 19 chr20 12499081 12499173 -54168832 + L1M4 LINE L1 5039 5121 -1025 247 267 0 0 chr20 12499235 12499295 -54168710 - L2 LINE L2 -72 3241 3182 448 270 10 0 chr20 12499330 12499430 -54168575 - MER94 DNA DNA -33 101 1 43 47 0 0 chr20 12499712 12499776 -54168229 + AT_rich Low_complexity Low_complexity 1 64 0 567 290 65 58 chr20 12499844 12499940 -54168065 - L1MC4a LINE L1 -302 5819 5725 1675 231 110 79 chr20 12499940 12500547 -54167458 + MLT1E2 LTR MaLR 1 626 0 567 290 65 58 chr20 12500547 12500988 -54167017 - L1MC4a LINE L1 -396 5725 5338 372 210 67 25 chr20 12501616 12501735 -54166270 - L1MC4 LINE L1 -2 8040 7917 2002 142 15 89 chr20 12501867 12502262 -54165743 - MER47A DNA MER2_type 0 366 1 769 240 76 32 chr20 12502271 12502521 -54165484 - L1ME2 LINE L1 -9 6155 5895 768 136 57 0 chr20 12504876 12505016 -54162989 + Charlie5 DNA MER1_type 2432 2579 -33 288 218 36 0 chr20 12505030 12505085 -54162920 + MER58 DNA MER1_type 1 57 -158 * 357 224 0 0 chr20 12505079 12505146 -54162859 + MER58 DNA MER1_type 169 235 -2185 722 317 85 17 chr20 12505671 12506081 -54161924 + L2 LINE L2 1372 1809 -1505 3804 122 12 0 chr20 12506081 12506758 -54161247 + L1PB1 LINE L1 5120 5803 -348 195 70 47 23 chr20 12506831 12506874 -54161131 + (TA)n Simple_repeat Simple_repeat 1 44 0 2652 88 11 32 chr20 12506881 12507072 -54160933 + L1PB1 LINE L1 5782 5976 -175 2101 72 7 11 chr20 12507072 12507351 -54160654 + AluY SINE Alu 21 298 -13 207 0 0 0 chr20 12507351 12507374 -54160631 + (TA)n Simple_repeat Simple_repeat 1 23 0 2652 88 11 32 chr20 12507374 12507558 -54160447 + L1PB1 LINE L1 5974 6150 -1 1733 291 60 21 chr20 12507571 12508283 -54159722 + L2 LINE L2 1794 2533 -781 248 240 13 197 chr20 12508360 12508593 -54159412 + L2 LINE L2 3032 3221 -92 6230 116 15 8 chr20 12508654 12510470 -54157535 - L1PA13 LINE L1 -11 6152 4328 1406 212 48 15 chr20 12510470 12510800 -54157205 - MER63 DNA MER1_type -36 1025 685 222 291 58 23 chr20 12510800 12510886 -54157119 - MIR SINE MIR -152 110 22 231 205 121 24 chr20 12510942 12511025 -54156980 - MLT1K LTR MaLR -342 246 156 2480 70 3 0 chr20 12511055 12511356 -54156649 + AluSx SINE Alu 1 302 -10 382 303 0 106 chr20 12512327 12512391 -54155614 + MIR SINE MIR 57 126 -136 234 0 0 0 chr20 12512391 12512417 -54155588 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1723 134 3 49 chr20 12512419 12512703 -54155302 - AluSx SINE Alu -31 281 11 382 303 0 106 chr20 12512703 12512853 -54155152 + MIR SINE MIR 127 251 -11 388 268 72 13 chr20 12513152 12513305 -54154700 + L1MC/D LINE L1 4915 5076 -1070 483 279 88 60 chr20 12513540 12513959 -54154046 + L1MC/D LINE L1 5385 5815 -1993 1215 275 49 56 chr20 12514521 12515404 -54152601 - L2 LINE L2 0 3313 2427 186 43 0 0 chr20 12516828 12516851 -54151154 + (T)n Simple_repeat Simple_repeat 1 23 0 277 320 108 26 chr20 12517566 12517760 -54150245 + MIR SINE MIR 1 210 -52 22 0 0 0 chr20 12519349 12519371 -54148634 + AT_rich Low_complexity Low_complexity 1 22 0 2840 64 35 0 chr20 12519477 12519820 -54148185 + THE1A LTR MaLR 1 355 0 3703 50 0 15 chr20 12519827 12520282 -54147723 - LTR7 LTR ERV1 -2 448 1 2532 81 45 13 chr20 12520282 12520663 -54147342 - HERVH LTR ERV1 0 7713 7321 1394 127 18 18 chr20 12520660 12520880 -54147125 - HERVH LTR ERV1 -1894 5819 5600 * 4359 147 3 1 chr20 12520881 12521542 -54146463 - HERVH LTR ERV1 -2564 5149 4488 3214 133 2 6 chr20 12521544 12522048 -54145957 - HERVH LTR ERV1 -3720 3993 3492 985 127 7 0 chr20 12522038 12522188 -54145817 - HERVH LTR ERV1 -4423 3290 3140 * 20835 90 14 20 chr20 12522174 12525185 -54142820 - HERVH LTR ERV1 -4721 2992 1 3417 59 0 15 chr20 12525187 12525642 -54142363 - LTR7 LTR ERV1 -2 448 1 672 286 125 0 chr20 12525647 12525871 -54142134 - LTR16C LTR ERVL 0 491 240 3415 60 7 5 chr20 12526069 12526516 -54141489 - LTR7 LTR ERV1 -2 448 1 201 173 27 40 chr20 12526712 12526787 -54141218 + GA-rich Low_complexity Low_complexity 4 77 0 22 35 0 0 chr20 12527005 12527034 -54140971 + AT_rich Low_complexity Low_complexity 1 29 0 183 342 63 36 chr20 12527235 12527346 -54140659 + MIR SINE MIR 1 114 -148 1795 125 0 0 chr20 12527354 12527594 -54140411 - AluSg SINE Alu -68 242 3 494 325 7 0 chr20 12527594 12527748 -54140257 + MIR SINE MIR 99 253 -9 1472 159 51 57 chr20 12528087 12528383 -54139622 - AluJo SINE Alu -13 299 6 609 264 153 54 chr20 12528492 12529215 -54138790 - LTR1 LTR ERV1 0 826 18 183 273 78 52 chr20 12530176 12530253 -54137752 - L2 LINE L2 -1 3312 3234 186 103 0 0 chr20 12530757 12530786 -54137219 + (TC)n Simple_repeat Simple_repeat 2 30 0 312 304 40 92 chr20 12531156 12531406 -54136599 + L2 LINE L2 3032 3268 -4 192 179 0 0 chr20 12531486 12531525 -54136480 + T-rich Low_complexity Low_complexity 1 39 0 2330 114 0 0 chr20 12531547 12531855 -54136150 - AluSq SINE Alu -5 308 1 671 159 0 0 chr20 12531935 12532042 -54135963 - FLAM_C SINE Alu -25 118 12 394 160 13 0 chr20 12533000 12533075 -54134930 - L1PB3 LINE L1 0 6154 6079 372 329 156 22 chr20 12533534 12533899 -54134106 - L1M4 LINE L1 -1386 4760 4347 248 339 8 8 chr20 12534065 12534195 -54133810 - L1M4 LINE L1 -1999 4147 4018 226 209 0 93 chr20 12534270 12534356 -54133649 + (TATATG)n Simple_repeat Simple_repeat 6 83 0 204 158 0 0 chr20 12534361 12534399 -54133606 + (TA)n Simple_repeat Simple_repeat 1 38 0 382 267 36 33 chr20 12534451 12534826 -54133179 - L1P LINE L1 -2255 3891 3521 213 352 34 0 chr20 12535604 12535692 -54132313 - MIR SINE MIR -110 152 62 742 178 0 0 chr20 12536293 12536422 -54131583 + L1PB4 LINE L1 6028 6156 0 596 184 22 15 chr20 12536503 12536639 -54131366 - MER103 DNA DNA -19 147 11 315 238 86 19 chr20 12536921 12537026 -54130979 + MER58C DNA MER1_type 20 131 -84 324 200 25 100 chr20 12537037 12537157 -54130848 + MER58C DNA MER1_type 105 215 0 30 0 0 0 chr20 12537211 12537241 -54130764 + AT_rich Low_complexity Low_complexity 1 30 0 1705 187 0 41 chr20 12537289 12537605 -54130400 + AluJo SINE Alu 1 303 -9 691 260 128 13 chr20 12538136 12538534 -54129471 - MLT1G3 LTR MaLR -12 583 32 33 0 0 0 chr20 12539848 12539881 -54128124 + AT_rich Low_complexity Low_complexity 1 33 0 1620 187 61 19 chr20 12540338 12540717 -54127288 + MSTD LTR MaLR 2 396 0 475 308 62 25 chr20 12540939 12541179 -54126826 + MIR SINE MIR 14 262 0 371 294 56 25 chr20 12541634 12541831 -54126174 - LTR16A1 LTR ERVL -73 384 182 677 283 63 0 chr20 12542929 12543152 -54124853 - LTR16C LTR ERVL 0 491 255 2256 116 7 0 chr20 12543257 12543567 -54124438 + AluSx SINE Alu 1 312 0 187 319 43 11 chr20 12544070 12544164 -54123841 + MIR SINE MIR 31 127 -81 304 283 40 10 chr20 12544482 12544581 -54123424 + L3 LINE CR1 1215 1316 -261 1924 99 0 102 chr20 12545930 12546084 -54121921 - L1PA15 LINE L1 -2 6163 6064 2442 93 0 0 chr20 12546084 12546395 -54121610 - AluY SINE Alu 0 311 1 1924 99 0 102 chr20 12546395 12546593 -54121412 - L1PA15 LINE L1 -101 6064 5847 26 0 0 0 chr20 12546648 12546674 -54121331 + AT_rich Low_complexity Low_complexity 1 26 0 685 63 0 0 chr20 12547350 12547445 -54120560 - L1MD1 LINE L1 0 6242 6148 2744 263 64 8 chr20 12547446 12547945 -54120060 - L1M4 LINE L1 -1465 4681 4211 207 100 0 0 chr20 12547945 12547975 -54120030 + (ATTG)n Simple_repeat Simple_repeat 3 32 0 2744 263 64 8 chr20 12547975 12548375 -54119630 - L1M4 LINE L1 -1935 4211 3711 2257 110 0 0 chr20 12548375 12548674 -54119331 - AluSx SINE Alu -13 299 1 2744 263 64 8 chr20 12548674 12548843 -54119162 - L1M4 LINE L1 -2435 3711 3553 1029 163 87 117 chr20 12549110 12549410 -54118595 - AluJb SINE Alu -5 307 17 466 307 17 39 chr20 12550122 12550301 -54117704 + MIR SINE MIR 67 241 -21 21 0 0 0 chr20 12550301 12550322 -54117683 + AT_rich Low_complexity Low_complexity 1 21 0 1235 280 95 30 chr20 12550368 12550907 -54117098 + MLT1E LTR MaLR 9 582 -11 580 316 7 0 chr20 12551663 12551818 -54116187 - L2 LINE L2 0 3313 3158 942 176 0 19 chr20 12553181 12553340 -54114665 - FRAM SINE Alu -10 156 1 21 0 0 0 chr20 12553449 12553470 -54114535 + AT_rich Low_complexity Low_complexity 1 21 0 237 314 0 0 chr20 12554331 12554401 -54113604 - L2 LINE L2 0 3272 3203 563 186 7 28 chr20 12554474 12554619 -54113386 + Charlie5 DNA MER1_type 2444 2585 -27 1261 261 131 4 chr20 12555275 12555508 -54112497 + MLT1H LTR MaLR 39 241 -308 180 0 0 0 chr20 12555508 12555528 -54112477 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1261 261 131 4 chr20 12555528 12555746 -54112259 + MLT1H LTR MaLR 241 547 -2 21 0 0 0 chr20 12556038 12556059 -54111946 + AT_rich Low_complexity Low_complexity 1 21 0 534 222 0 102 chr20 12557949 12558174 -54109831 - MER3 DNA MER1_type 0 209 8 759 216 53 11 chr20 12559101 12559291 -54108714 - MLT1B LTR MaLR -5 385 188 644 181 105 23 chr20 12559342 12559513 -54108492 - MLT1B LTR MaLR -189 185 1 2069 140 0 34 chr20 12559577 12559945 -54108060 + AluSx SINE Alu 1 357 0 730 291 36 8 chr20 12560234 12560481 -54107524 - MIR SINE MIR -1 261 8 1846 194 15 50 chr20 12560810 12561270 -54106735 - L1MB7 LINE L1 -19 6165 5722 1370 192 58 33 chr20 12561271 12561397 -54106608 + MLT1B LTR MaLR 31 152 -238 2307 103 3 0 chr20 12561397 12561697 -54106308 - AluSp SINE Alu -12 301 1 1370 192 58 33 chr20 12561697 12561917 -54106088 + MLT1B LTR MaLR 152 390 0 411 299 15 54 chr20 12561922 12562126 -54105879 + L2 LINE L2 3114 3309 -4 348 262 127 93 chr20 12562406 12562643 -54105362 - MLT1J LTR MaLR -37 474 230 1524 202 48 71 chr20 12562898 12563374 -54104631 - MLT1C LTR MaLR -2 465 1 1678 275 90 8 chr20 12563399 12563934 -54104071 + MER119 DNA MER1_type 5 583 0 812 230 11 21 chr20 12564951 12565142 -54102863 + MER5A DNA MER1_type 1 189 0 201 250 0 0 chr20 12565142 12565182 -54102823 + (TG)n Simple_repeat Simple_repeat 1 40 0 207 191 21 0 chr20 12565264 12565311 -54102694 - L2 LINE L2 -2 3311 3264 441 0 0 0 chr20 12566620 12566669 -54101336 + (TG)n Simple_repeat Simple_repeat 2 50 0 4780 204 29 10 chr20 12567277 12568877 -54099128 + L1MC2 LINE L1 4705 6334 -10 3079 200 39 27 chr20 12568862 12569255 -54098750 + L1MB3 LINE L1 5281 5689 -494 * 2261 104 0 10 chr20 12569255 12569563 -54098442 + AluSg SINE Alu 1 305 -5 3079 200 39 27 chr20 12569563 12569914 -54098091 + L1MB3 LINE L1 5689 6034 -149 1060 120 0 0 chr20 12569925 12570092 -54097913 + L1MA4 LINE L1 6127 6293 -7 29 0 0 0 chr20 12570101 12570130 -54097875 + AT_rich Low_complexity Low_complexity 1 29 0 529 177 16 8 chr20 12570138 12570262 -54097743 + L1MB2 LINE L1 6044 6168 -3 1502 261 28 37 chr20 12570321 12570884 -54097121 + L1MC3 LINE L1 7 564 -5481 1059 247 32 40 chr20 12570986 12571391 -54096614 + L1MC3 LINE L1 575 976 -5069 7090 244 48 58 chr20 12571537 12572816 -54095189 + L1MC3 LINE L1 2690 3981 -4222 186 43 0 0 chr20 12572816 12572839 -54095166 + (TG)n Simple_repeat Simple_repeat 2 24 0 7090 244 48 58 chr20 12572839 12572959 -54095046 + L1MC3 LINE L1 3981 4101 -4102 535 99 0 12 chr20 12572959 12573040 -54094965 - MADE1 DNA Mariner 0 80 1 7090 244 48 58 chr20 12573040 12573700 -54094305 + L1MC3 LINE L1 4101 4766 -3437 2214 108 3 3 chr20 12573700 12574006 -54093999 + AluSx SINE Alu 1 306 -6 7090 244 48 58 chr20 12574006 12576906 -54091099 + L1MC3 LINE L1 4766 7767 -436 563 291 101 32 chr20 12577282 12577560 -54090445 + L2 LINE L2 2864 3160 -153 25 51 0 0 chr20 12577565 12577604 -54090401 + AT_rich Low_complexity Low_complexity 1 39 0 378 219 82 104 chr20 12577624 12577807 -54090198 + L2 LINE L2 3135 3313 0 2053 196 72 57 chr20 12578197 12578826 -54089179 - LTR9B LTR ERV1 0 644 7 291 353 111 0 chr20 12579398 12579588 -54088417 + MIR SINE MIR 2 212 -50 307 315 164 24 chr20 12579879 12580092 -54087913 - L2 LINE L2 -2 3270 3028 27 29 0 0 chr20 12580261 12580295 -54087710 + AT_rich Low_complexity Low_complexity 1 34 0 489 133 407 7 chr20 12581064 12581199 -54086806 + MER5A DNA MER1_type 1 189 0 419 357 75 8 chr20 12581838 12582079 -54085926 - MLT1K LTR MaLR -141 447 191 1729 64 5 0 chr20 12582608 12582827 -54085178 + AluY SINE Alu 85 304 -7 207 316 82 31 chr20 12583521 12583619 -54084386 + MIR SINE MIR 27 129 -133 2141 133 3 0 chr20 12583665 12583967 -54084038 + AluSq SINE Alu 1 303 -10 24 0 0 0 chr20 12584405 12584429 -54083576 + AT_rich Low_complexity Low_complexity 1 24 0 276 185 0 0 chr20 12584694 12584748 -54083257 + (TA)n Simple_repeat Simple_repeat 2 55 0 238 270 0 0 chr20 12584749 12584838 -54083167 + L1MC4 LINE L1 6615 6703 -1339 393 347 36 21 chr20 12585135 12585328 -54082677 - MLT1K LTR MaLR -355 233 38 1675 198 22 19 chr20 12585519 12585883 -54082122 - MLT1A1 LTR MaLR 0 365 1 605 211 51 99 chr20 12585883 12586195 -54081810 + LTR16A1 LTR ERVL 9 305 -152 418 239 20 78 chr20 12586566 12586681 -54081324 - MER5A DNA MER1_type -73 105 9 207 0 0 0 chr20 12586912 12586935 -54081070 + (T)n Simple_repeat Simple_repeat 1 23 0 276 263 142 27 chr20 12587536 12587679 -54080326 - MER5A DNA MER1_type -2 187 1 505 298 16 0 chr20 12587690 12587811 -54080194 - MER5A DNA MER1_type -3 186 64 708 183 0 8 chr20 12587823 12587943 -54080062 - FLAM_C SINE Alu -22 121 3 260 263 35 0 chr20 12587946 12588003 -54080002 - MER5A DNA MER1_type -114 75 17 2373 105 11 35 chr20 12588013 12588386 -54079619 + THE1B LTR MaLR 1 364 0 543 213 149 0 chr20 12588400 12588541 -54079464 + MER5B DNA MER1_type 17 178 0 633 239 82 53 chr20 12588606 12588849 -54079156 + MIR SINE MIR 13 262 0 21 57 0 0 chr20 12588896 12588931 -54079074 + AT_rich Low_complexity Low_complexity 1 35 0 2582 118 3 0 chr20 12588931 12589320 -54078685 - L1PA14 LINE L1 -3 6158 5769 1602 249 71 31 chr20 12589584 12590106 -54077899 + MLT1H LTR MaLR 7 549 0 360 0 0 0 chr20 12590349 12590389 -54077616 + (TG)n Simple_repeat Simple_repeat 2 41 0 205 414 7 7 chr20 12591436 12591576 -54076429 - L2 LINE L2 -262 3010 2871 185 386 0 0 chr20 12591688 12591776 -54076229 - L2 LINE L2 -654 2660 2573 630 271 5 5 chr20 12591792 12591980 -54076025 - LTR16A1 LTR ERVL -21 436 249 277 241 25 0 chr20 12592345 12592424 -54075581 + MER103 DNA DNA 15 95 -71 205 229 14 29 chr20 12592600 12592670 -54075335 - L2 LINE L2 -923 2391 2323 222 372 33 44 chr20 12592730 12592913 -54075092 - L2 LINE L2 -1120 2194 2014 280 344 0 86 chr20 12593386 12593537 -54074468 - L2 LINE L2 -1 3271 3134 338 277 68 47 chr20 12594916 12595064 -54072941 - MIR SINE MIR -74 188 38 275 140 20 0 chr20 12596334 12596384 -54071621 - MLT2F LTR ERVL 0 663 613 1458 251 96 7 chr20 12596388 12596838 -54071167 - MLT2F LTR ERVL -173 490 1 216 0 0 0 chr20 12597580 12597604 -54070401 + (TG)n Simple_repeat Simple_repeat 2 25 0 669 248 85 99 chr20 12598295 12598836 -54069169 + MLT1G LTR MaLR 34 578 -17 238 264 14 0 chr20 12598919 12598991 -54069014 + (TAG)n Simple_repeat Simple_repeat 2 74 0 376 345 62 0 chr20 12599029 12599174 -54068831 - MIR SINE MIR -96 166 13 215 219 0 96 chr20 12599226 12599299 -54068706 - MIR SINE MIR -2 260 195 21 0 0 0 chr20 12599661 12599682 -54068323 + AT_rich Low_complexity Low_complexity 1 21 0 2229 104 0 7 chr20 12600437 12600735 -54067270 + AluSx SINE Alu 1 296 -16 267 313 80 0 chr20 12600759 12600909 -54067096 + MLT1L LTR MaLR 446 607 -8 588 316 46 1 chr20 12601312 12601509 -54066496 + MIR SINE MIR 42 246 -16 428 222 188 0 chr20 12602113 12602230 -54065775 + MER5A DNA MER1_type 51 189 0 1485 182 39 4 chr20 12603493 12603773 -54064232 - AluJo SINE Alu -22 290 1 262 321 39 99 chr20 12604620 12605062 -54062943 + L2 LINE L2 2858 3272 0 259 294 15 15 chr20 12605082 12605150 -54062855 + MIR SINE MIR 78 145 -63 300 194 15 30 chr20 12605415 12605482 -54062523 - MIR3 SINE MIR -19 189 124 749 307 70 55 chr20 12609457 12609897 -54058108 - LTR16C LTR ERVL -44 447 1 272 241 17 0 chr20 12610881 12610939 -54057066 + L2 LINE L2 3214 3272 0 36765 34 10 1 chr20 12611206 12616699 -54051306 - L1PA3 LINE L1 -2 6153 617 677 47 0 0 chr20 12616693 12616779 -54051226 - L1PA3 LINE L1 -6048 98 13 * 262 348 15 45 chr20 12616836 12617037 -54050968 + L2 LINE L2 3090 3284 -29 916 313 75 3 chr20 12617055 12617413 -54050592 - LTR16C LTR ERVL -34 457 74 943 284 77 17 chr20 12618463 12618931 -54049074 - L1MC4 LINE L1 -9 8033 7538 192 77 0 0 chr20 12618933 12618959 -54049046 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 539 340 21 71 chr20 12619664 12620002 -54048003 - L2 LINE L2 -37 3235 2915 243 237 0 66 chr20 12620035 12620111 -54047894 - MLT1H LTR MaLR 0 549 479 348 239 0 58 chr20 12620949 12621063 -54046942 + MER5A DNA MER1_type 4 109 -80 2356 117 8 8 chr20 12621590 12621941 -54046064 - THE1A LTR MaLR 0 355 5 2174 128 0 0 chr20 12621968 12622273 -54045732 + AluSq SINE Alu 1 305 -8 471 299 0 15 chr20 12622459 12622596 -54045409 + MIR SINE MIR 12 146 -116 277 259 138 26 chr20 12622813 12623040 -54044965 + MLT1G1 LTR MaLR 282 595 0 709 331 38 31 chr20 12623234 12623842 -54044163 - L1MC4a LINE L1 -1925 5883 5272 3997 68 4 0 chr20 12623848 12624366 -54043639 - L1PA8 LINE L1 -11 6161 5642 696 176 99 0 chr20 12624588 12624730 -54043275 - L1PB4 LINE L1 0 6156 6001 354 269 62 7 chr20 12625171 12625316 -54042689 - MARNA DNA Mariner -189 397 245 241 330 11 0 chr20 12625506 12625597 -54042408 + MARNA DNA Mariner 456 547 -39 784 259 35 0 chr20 12626113 12626287 -54041718 + MER5A DNA MER1_type 10 189 0 211 296 28 14 chr20 12626514 12626585 -54041420 - L2 LINE L2 -8 3305 3234 1500 213 45 14 chr20 12626588 12626945 -54041060 - MER39 LTR ERV1 0 707 340 517 233 82 9 chr20 12627003 12627175 -54040830 - MER39 LTR ERV1 -503 155 6 205 375 12 12 chr20 12627180 12627260 -54040745 - L2 LINE L2 -88 3184 3105 235 0 28 28 chr20 12629650 12629686 -54038319 + (CAAAAA)n Simple_repeat Simple_repeat 3 38 0 253 312 0 26 chr20 12629761 12629838 -54038167 + CT-rich Low_complexity Low_complexity 3 77 0 2152 190 12 5 chr20 12630290 12630706 -54037299 + L1PB3 LINE L1 5729 6147 -7 222 174 0 0 chr20 12630706 12630752 -54037253 + (TA)n Simple_repeat Simple_repeat 1 46 0 2270 183 24 2 chr20 12631652 12632061 -54035944 - MER47B DNA MER2_type 0 418 1 238 401 41 7 chr20 12632075 12632222 -54035783 + MIR SINE MIR 3 154 -108 881 287 26 33 chr20 12632418 12632725 -54035280 + LTR16C LTR ERVL 83 387 -104 2529 122 23 50 chr20 12632858 12633294 -54034711 - MSTC LTR MaLR -4 424 1 474 65 0 0 chr20 12633953 12634015 -54033990 + (TCCA)n Simple_repeat Simple_repeat 3 64 0 208 366 0 15 chr20 12634018 12634152 -54033853 + CT-rich Low_complexity Low_complexity 3 134 0 599 297 56 36 chr20 12634247 12634496 -54033509 + MIR SINE MIR 9 262 0 311 227 68 84 chr20 12635379 12635558 -54032447 - MLT1J2 LTR MaLR -13 406 251 220 358 119 24 chr20 12636778 12637071 -54030934 - L2 LINE L2 -5 3308 2988 488 313 28 22 chr20 12638054 12638233 -54029772 + MIR3 SINE MIR 25 204 -4 231 114 0 0 chr20 12638445 12638480 -54029525 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 398 234 158 38 chr20 12639268 12639426 -54028579 + MER5B DNA MER1_type 2 178 0 1396 134 25 0 chr20 12639535 12639773 -54028232 - L1MA5A LINE L1 -10 6287 6044 199 338 149 14 chr20 12639935 12640083 -54027922 - MIR SINE MIR -74 188 21 472 330 93 56 chr20 12641143 12641388 -54026617 + L3 LINE CR1 733 967 -610 1105 264 56 29 chr20 12641388 12641832 -54026173 + LTR16A1 LTR ERVL 1 456 -1 472 330 93 56 chr20 12641832 12642231 -54025774 + L3 LINE CR1 967 1401 -176 242 292 15 0 chr20 12642506 12642571 -54025434 - L2 LINE L2 0 3313 3248 263 0 81 0 chr20 12642582 12642619 -54025386 + T-rich Low_complexity Low_complexity 2 41 0 182 271 42 42 chr20 12642957 12643005 -54025000 - L2 LINE L2 -69 3203 3156 1669 157 16 33 chr20 12643063 12643368 -54024637 - AluJo SINE Alu -12 300 1 10198 26 0 0 chr20 12643513 12645485 -54022520 - L1PA2 LINE L1 -7 6148 4177 2012 119 3 30 chr20 12645514 12645816 -54022189 + AluSg SINE Alu 4 297 -13 524 192 0 8 chr20 12646070 12646190 -54021815 + GA-rich Low_complexity Low_complexity 2 120 0 2220 116 0 10 chr20 12647024 12647334 -54020671 + AluSx SINE Alu 1 307 -5 434 281 91 63 chr20 12648806 12649242 -54018763 + MLT1H LTR MaLR 3 548 -1 686 304 47 22 chr20 12649537 12649856 -54018149 + L1M3c LINE L1 1356 1682 -5814 342 343 42 28 chr20 12650138 12650421 -54017584 + L1M3c LINE L1 1920 2206 -5360 1639 163 41 7 chr20 12650451 12650721 -54017284 + AluJb SINE Alu 2 280 -32 207 0 0 0 chr20 12650722 12650745 -54017260 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 667 228 6 41 chr20 12650745 12650916 -54017089 + L1M3c LINE L1 2804 2968 -4598 8755 220 35 32 chr20 12651040 12654293 -54013712 + L1MA9 LINE L1 2647 5916 -1649 1078 163 82 25 chr20 12654297 12654416 -54013589 + AluJb SINE Alu 3 139 -173 203 77 0 26 chr20 12654416 12654455 -54013550 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 1078 163 82 25 chr20 12654455 12654531 -54013474 + AluJb SINE Alu 139 209 -103 2764 190 30 36 chr20 12654537 12655173 -54012832 + L1MA9 LINE L1 7096 7727 -4 697 203 98 0 chr20 12656216 12656274 -54011731 + LTR47A LTR ERVL 274 325 -127 182 31 0 62 chr20 12656274 12656306 -54011699 + (TTA)n Simple_repeat Simple_repeat 3 32 0 1504 219 0 0 chr20 12656306 12656598 -54011407 - L1PB4 LINE L1 -15 6141 5850 697 203 98 0 chr20 12656598 12656701 -54011304 + LTR47A LTR ERVL 324 452 0 240 194 16 48 chr20 12657057 12657119 -54010886 + MIR SINE MIR 92 151 -57 2634 51 0 6 chr20 12658046 12658359 -54009646 - AluY SINE Alu 0 311 1 4707 123 17 13 chr20 12659096 12659876 -54008129 - L1MA4A LINE L1 -5 6298 5516 1446 237 27 22 chr20 12659876 12660285 -54007720 - L1 LINE L1 -3153 3695 3285 * 9124 176 42 154 chr20 12660261 12662307 -54005698 - L1 LINE L1 -4044 2805 1237 264 30 0 0 chr20 12662307 12662340 -54005665 + (TG)n Simple_repeat Simple_repeat 2 34 0 9124 176 42 154 chr20 12662340 12663443 -54004562 - L1 LINE L1 -5612 1237 11 195 42 0 0 chr20 12663930 12663954 -54004051 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 1271 253 107 53 chr20 12664095 12664620 -54003385 - MER119 DNA MER1_type -1 582 30 233 252 139 54 chr20 12664662 12664920 -54003085 + L1ME3A LINE L1 1063 1342 -4863 379 356 28 36 chr20 12665005 12665258 -54002747 + L1ME3A LINE L1 1491 1741 -4655 2289 128 27 3 chr20 12665357 12665723 -54002282 + THE1C LTR MaLR 1 375 0 641 333 36 9 chr20 12665991 12666441 -54001564 + L1ME3A LINE L1 3924 4385 -1830 349 286 85 72 chr20 12666490 12666739 -54001266 + L1ME3A LINE L1 4392 4636 -1579 858 247 18 35 chr20 12666739 12666966 -54001039 - MER58A DNA MER1_type 0 224 2 349 286 85 72 chr20 12666966 12667512 -54000493 + L1ME3A LINE L1 4636 5198 -1017 619 323 56 22 chr20 12667633 12668303 -53999702 + L1ME3A LINE L1 5327 6026 -213 440 241 63 115 chr20 12668955 12669129 -53998876 + MER5B DNA MER1_type 13 177 -1 513 268 20 26 chr20 12670160 12670313 -53997692 - LTR16C LTR ERVL 0 491 340 649 197 14 7 chr20 12670315 12670462 -53997543 + L1MB7 LINE L1 6032 6179 -5 588 279 89 30 chr20 12670491 12670728 -53997277 - LTR16C LTR ERVL -156 335 85 475 229 161 57 chr20 12670900 12671204 -53996801 - LTR49 LTR ERV1 0 595 271 972 192 142 0 chr20 12671207 12671426 -53996579 - MER34C LTR ERV1 -332 253 4 222 265 0 44 chr20 12671896 12672032 -53995973 + A-rich Low_complexity Low_complexity 2 131 0 584 319 65 26 chr20 12672880 12673393 -53994612 + L1MC4a LINE L1 2173 2678 -3537 12426 169 15 2 chr20 12673393 12675470 -53992535 + ERVL LTR ERVL 1375 3509 -2255 1027 219 50 10 chr20 12675480 12675681 -53992324 + MLT2B3 LTR ERVL 296 504 -50 543 16 0 0 chr20 12675681 12675745 -53992260 + (TCTA)n Simple_repeat Simple_repeat 2 65 0 1896 159 14 0 chr20 12675882 12676165 -53991840 + AluSx SINE Alu 6 292 -20 655 48 73 12 chr20 12676169 12676334 -53991671 + (TA)n Simple_repeat Simple_repeat 2 176 0 717 330 97 46 chr20 12676613 12677665 -53990340 + L1MC4a LINE L1 4252 5355 -860 430 258 46 36 chr20 12677667 12677861 -53990144 + L1MC4a LINE L1 5364 5559 -2318 1060 274 71 25 chr20 12677872 12678353 -53989652 + L1MC4a LINE L1 5598 6100 -1777 581 318 88 13 chr20 12678580 12679143 -53988862 + L1MC4a LINE L1 5352 5532 -691 22 0 0 0 chr20 12679345 12679367 -53988638 + AT_rich Low_complexity Low_complexity 1 22 0 934 206 15 5 chr20 12679555 12679754 -53988251 - L1PB4 LINE L1 -8 6148 5948 458 207 279 0 chr20 12679820 12679960 -53988045 - MER5A DNA MER1_type -1 188 10 372 298 16 16 chr20 12680939 12681130 -53986875 + L1ME4a LINE L1 5658 5848 -273 21 0 0 0 chr20 12681185 12681206 -53986799 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 12681451 12681472 -53986533 + AT_rich Low_complexity Low_complexity 1 21 0 270 0 0 0 chr20 12681711 12681741 -53986264 + (T)n Simple_repeat Simple_repeat 1 30 0 1453 228 60 36 chr20 12681924 12682372 -53985633 + MLT1C LTR MaLR 9 467 0 471 342 37 25 chr20 12682524 12682878 -53985127 - LTR16C LTR ERVL -35 456 99 270 250 36 54 chr20 12683148 12683316 -53984689 + MLT1K LTR MaLR 389 553 -35 902 181 53 0 chr20 12683345 12683516 -53984489 + MER5A DNA MER1_type 10 189 0 726 197 98 39 chr20 12684462 12684665 -53983340 + MLT1J2 LTR MaLR 48 262 -188 700 254 40 0 chr20 12684693 12684870 -53983135 + MER58A DNA MER1_type 37 220 -4 966 224 18 5 chr20 12686155 12686378 -53981627 - LTR16C LTR ERVL 0 491 266 315 329 44 0 chr20 12686439 12686576 -53981429 - LTR16C LTR ERVL -348 143 1 632 260 29 0 chr20 12687652 12687825 -53980180 - MER5B DNA MER1_type 0 178 1 1020 271 139 33 chr20 12687887 12688312 -53979693 + L2 LINE L2 2320 2789 -525 311 236 91 9 chr20 12688381 12688491 -53979514 + MER103 DNA DNA 17 135 -31 1696 192 48 3 chr20 12688537 12688891 -53979114 + MSTB LTR MaLR 1 370 -56 450 94 0 0 chr20 12688893 12688957 -53979048 + (TTCC)n Simple_repeat Simple_repeat 2 65 0 2177 118 7 0 chr20 12688977 12689265 -53978740 - AluSx SINE Alu -22 290 1 478 97 0 0 chr20 12689265 12689337 -53978668 + MSTB LTR MaLR 355 426 0 2184 71 0 4 chr20 12689646 12689913 -53978092 - AluSq SINE Alu -9 304 39 2501 114 23 46 chr20 12689936 12690123 -53977882 + MSTA LTR MaLR 1 191 -237 2318 92 7 7 chr20 12690123 12690429 -53977576 - AluSg SINE Alu -3 307 2 2501 114 23 46 chr20 12690429 12690679 -53977326 + MSTA LTR MaLR 191 428 0 40688 37 22 1 chr20 12690930 12696954 -53971051 - L1PA2 LINE L1 -1 6154 2 1287 133 0 0 chr20 12698178 12698358 -53969647 - AluSg/x SINE Alu -8 304 125 1605 128 30 40 chr20 12698375 12698502 -53969503 + L1PA16 LINE L1 5872 5999 -167 2317 109 0 0 chr20 12698502 12698806 -53969199 + AluSq SINE Alu 1 304 -9 1605 128 30 40 chr20 12698806 12698976 -53969029 + L1PA16 LINE L1 5999 6166 0 847 310 68 68 chr20 12698991 12699491 -53968514 - L2 LINE L2 -1 3312 2813 324 259 207 22 chr20 12699510 12699645 -53968360 + MER91A DNA MER1_type 15 174 -22 5053 291 106 11 chr20 12699733 12701652 -53966353 - L2 LINE L2 -513 2801 700 5003 169 53 20 chr20 12701722 12702936 -53965069 - L1MC3 LINE L1 0 7785 6476 256 355 0 11 chr20 12702960 12703053 -53964952 + MER20B DNA MER1_type 86 177 -606 283 286 33 0 chr20 12703095 12703186 -53964819 - L2 LINE L2 -2615 699 606 889 310 9 26 chr20 12703257 12703605 -53964400 + MLT1H LTR MaLR 10 351 -198 1604 226 67 36 chr20 12703666 12704209 -53963796 + MLT1F1 LTR MaLR 1 567 0 256 315 11 0 chr20 12704210 12704299 -53963706 + MLT1H LTR MaLR 443 532 -17 271 265 34 86 chr20 12704319 12704436 -53963569 - L2 LINE L2 -2764 550 440 291 54 0 0 chr20 12704905 12704942 -53963063 + (GA)n Simple_repeat Simple_repeat 2 38 0 1283 210 99 55 chr20 12704992 12705426 -53962579 + LTR16A1 LTR ERVL 1 453 -4 318 291 10 10 chr20 12706424 12706527 -53961478 - MIR SINE MIR -71 191 89 25 0 0 0 chr20 12707585 12707610 -53960395 + AT_rich Low_complexity Low_complexity 1 25 0 215 348 71 35 chr20 12707975 12708116 -53959889 + L2 LINE L2 3167 3312 -1 216 219 0 0 chr20 12708726 12708767 -53959238 + (TAA)n Simple_repeat Simple_repeat 1 41 0 244 145 158 26 chr20 12709100 12709176 -53958829 - MER89 LTR ERV1 0 559 474 38 61 0 0 chr20 12709325 12709391 -53958614 + AT_rich Low_complexity Low_complexity 1 66 0 962 212 9 107 chr20 12709736 12710169 -53957836 - MER89 LTR ERV1 -69 490 5 262 167 0 0 chr20 12710550 12710592 -53957413 - tRNA-Asp-GAC tRNA tRNA -33 42 1 441 285 102 7 chr20 12712181 12712318 -53955687 - MER5A DNA MER1_type -30 159 10 246 311 83 44 chr20 12713765 12713945 -53954060 - MIR SINE MIR -8 254 68 409 321 94 6 chr20 12714552 12714711 -53953294 + MIR3 SINE MIR 33 205 -3 267 356 0 0 chr20 12715660 12715775 -53952230 - L1ME LINE L1 -290 5880 5766 568 251 37 37 chr20 12715933 12716096 -53951909 - MER63 DNA MER1_type -273 789 1 231 306 51 44 chr20 12716101 12716153 -53951852 - L1ME LINE L1 -627 5539 5489 342 0 0 0 chr20 12716153 12716191 -53951814 + (CA)n Simple_repeat Simple_repeat 1 38 0 231 306 51 44 chr20 12716191 12716413 -53951592 - L1ME LINE L1 -677 5489 5263 6818 61 5 0 chr20 12716682 12718276 -53949729 - L1PA7 LINE L1 -6 6148 4544 1920 134 11 0 chr20 12718276 12718559 -53949446 - AluSx SINE Alu -26 286 1 711 282 170 47 chr20 12719211 12719425 -53948580 - L1ME LINE L1 -2678 3468 3282 2294 113 0 6 chr20 12719425 12719736 -53948269 - AluSg SINE Alu -1 309 1 711 282 170 47 chr20 12719736 12720057 -53947948 - L1ME LINE L1 -2864 3282 2867 786 179 7 26 chr20 12720076 12720254 -53947751 - FRAM SINE Alu 0 173 1 364 277 32 74 chr20 12720305 12720645 -53947360 - L1MC5 LINE L1 -104 7857 7549 2817 3 0 10 chr20 12720645 12720957 -53947048 - AluYa5 SINE Alu -2 309 1 364 277 32 74 chr20 12720957 12721183 -53946822 - L1MC5 LINE L1 -412 7549 7315 3601 258 63 36 chr20 12721383 12722774 -53945231 + L1ME1 LINE L1 3547 4898 -1268 378 0 0 0 chr20 12722774 12722816 -53945189 + (CA)n Simple_repeat Simple_repeat 2 43 0 3601 258 63 36 chr20 12722816 12723346 -53944659 + L1ME1 LINE L1 4898 5412 -754 2079 127 3 3 chr20 12723346 12723654 -53944351 + AluSx SINE Alu 1 308 -4 3601 258 63 36 chr20 12723654 12724218 -53943787 + L1ME1 LINE L1 5412 6101 -65 2023 152 0 0 chr20 12726614 12726916 -53941089 - AluSx SINE Alu -10 302 1 802 300 37 4 chr20 12729559 12729802 -53938203 - MIR SINE MIR 0 262 12 27 29 0 0 chr20 12730991 12731025 -53936980 + AT_rich Low_complexity Low_complexity 1 34 0 2312 259 16 40 chr20 12731055 12731724 -53936281 + L1M3e LINE L1 466 1118 -6371 2249 232 82 59 chr20 12731723 12732954 -53935051 + L1M3e LINE L1 2137 3309 -4256 * 2477 28 0 0 chr20 12732954 12733245 -53934760 + L1PA4 LINE L1 5862 6152 -3 2249 232 82 59 chr20 12733245 12733913 -53934092 + L1M3e LINE L1 3309 3960 -3605 * 15866 174 32 20 chr20 12733912 12736857 -53931148 + L1MB7 LINE L1 15 2993 -4572 2039 100 38 38 chr20 12736876 12737217 -53930788 + L1MA1 LINE L1 5962 6302 0 9260 206 52 25 chr20 12737217 12739662 -53928343 + L1MB7 LINE L1 3946 6458 -1107 * 9893 192 31 27 chr20 12739642 12744147 -53923858 - L1PBa LINE L1 -1577 5285 634 1094 166 5 0 chr20 12744147 12744346 -53923659 - L1PBa LINE L1 -6663 200 1 455 353 62 24 chr20 12744513 12744805 -53923200 + L2 LINE L2 3005 3307 -6 325 299 24 43 chr20 12745902 12746066 -53921939 + L2 LINE L2 3116 3276 -37 22 0 0 0 chr20 12746066 12746088 -53921917 + AT_rich Low_complexity Low_complexity 1 22 0 4114 205 22 2 chr20 12746094 12746959 -53921046 + L1MB7 LINE L1 6695 7576 -27 541 244 65 55 chr20 12746994 12747195 -53920810 - MIR SINE MIR -1 261 59 217 265 36 36 chr20 12747501 12747584 -53920421 + MIR3 SINE MIR 123 205 -3 469 288 72 40 chr20 12748433 12748655 -53919350 + LTR16A1 LTR ERVL 208 436 -21 339 374 42 21 chr20 12749340 12749629 -53918376 + L2 LINE L2 2591 2885 -429 1178 235 106 21 chr20 12751094 12751744 -53916261 - L1ME LINE L1 -707 5459 4742 230 216 124 31 chr20 12752338 12752435 -53915570 - MER113 DNA MER1_type? -407 114 9 303 292 26 18 chr20 12752506 12752619 -53915386 + LTR16A1 LTR ERVL 7 120 -337 2060 196 22 51 chr20 12752638 12753129 -53914876 - MER31A LTR ERV1 -8 477 1 601 202 0 0 chr20 12753232 12753341 -53914664 + LTR16A1 LTR ERVL 349 457 0 1071 309 15 2 chr20 12754117 12754512 -53913493 - L1ME3 LINE L1 -8 6154 5755 633 237 76 50 chr20 12754550 12754604 -53913401 - MSTD LTR MaLR 0 396 345 2384 140 29 17 chr20 12754604 12755025 -53912980 - MSTB LTR MaLR 0 426 1 633 237 76 50 chr20 12755025 12755168 -53912837 - MSTD LTR MaLR -51 345 194 709 241 70 51 chr20 12755170 12755426 -53912579 - MSTD LTR MaLR -163 263 1 2803 206 67 21 chr20 12755426 12756088 -53911917 + L1MB8 LINE L1 5404 6104 -74 412 175 0 0 chr20 12756088 12756168 -53911837 - MADE1 DNA Mariner 0 80 1 2803 206 67 21 chr20 12756168 12756232 -53911773 + L1MB8 LINE L1 6104 6164 -14 465 270 7 13 chr20 12756290 12756442 -53911563 - L1ME3 LINE L1 -1132 5014 4864 345 276 98 6 chr20 12756624 12756798 -53911207 + L1ME4a LINE L1 5526 5715 -406 310 234 145 20 chr20 12756869 12757117 -53910888 + L1ME4a LINE L1 5810 6088 -33 250 378 65 5 chr20 12757200 12757385 -53910620 + MIR SINE MIR 54 249 -13 332 309 120 5 chr20 12757392 12757609 -53910396 - L1ME LINE L1 -335 5786 5545 359 278 76 21 chr20 12757942 12758086 -53909919 - HAL1b LINE L1 -10 1338 1187 876 298 102 28 chr20 12758090 12758834 -53909171 - HAL1b LINE L1 -120 1228 430 767 226 0 26 chr20 12759075 12759230 -53908775 + AluJo SINE Alu 1 151 -161 1769 69 0 26 chr20 12759362 12759594 -53908411 - AluY SINE Alu -3 308 83 21 36 0 0 chr20 12759936 12759964 -53908041 + AT_rich Low_complexity Low_complexity 1 28 0 537 274 128 10 chr20 12760036 12760342 -53907663 + L1ME3 LINE L1 3637 3978 -2168 1228 256 43 5 chr20 12760361 12760799 -53907206 + L1ME3 LINE L1 4372 4826 -1320 284 241 222 0 chr20 12760805 12760913 -53907092 + L1ME3 LINE L1 4876 5007 -1139 1445 227 105 31 chr20 12760918 12761684 -53906321 + L1ME3 LINE L1 5078 5906 -256 268 253 22 66 chr20 12761688 12761779 -53906226 + L1ME3 LINE L1 5962 6048 -114 303 244 126 8 chr20 12761780 12761899 -53906106 + L1MC4a LINE L1 4875 5007 -1139 326 285 1 3 chr20 12761916 12762038 -53905967 + L1ME2 LINE L1 6049 6170 0 21 0 0 0 chr20 12762066 12762087 -53905918 + AT_rich Low_complexity Low_complexity 1 21 0 575 302 66 61 chr20 12762114 12762723 -53905282 + L1MC4a LINE L1 5301 5912 -1896 1428 291 60 29 chr20 12763133 12763649 -53904356 + MLT1H LTR MaLR 18 549 0 510 285 95 15 chr20 12763817 12763842 -53904163 + MIR SINE MIR 6 28 -234 2532 48 0 10 chr20 12763842 12764153 -53903852 + AluY SINE Alu 1 308 -3 510 285 95 15 chr20 12764153 12764327 -53903678 + MIR SINE MIR 28 221 -41 21 36 0 0 chr20 12764337 12764365 -53903640 + AT_rich Low_complexity Low_complexity 1 28 0 1066 252 76 60 chr20 12764444 12764841 -53903164 + LTR16A1 LTR ERVL 55 457 0 242 203 29 87 chr20 12765693 12765762 -53902243 - MER5A DNA MER1_type -84 105 41 1874 114 84 0 chr20 12765871 12766144 -53901861 + AluSq SINE Alu 1 296 -17 1659 304 140 10 chr20 12766156 12766373 -53901632 - L2 LINE L2 -19 3294 3107 1851 180 47 38 chr20 12766373 12766795 -53901210 + MSTB LTR MaLR 1 426 0 1659 304 140 10 chr20 12766795 12767741 -53900264 - L2 LINE L2 -206 3107 1988 3530 82 2 0 chr20 12768790 12769242 -53898763 - MLT2A2 LTR ERVL 0 453 1 265 327 120 27 chr20 12771384 12771534 -53896471 - MIR SINE MIR -79 183 20 213 387 57 16 chr20 12771827 12771951 -53896054 + L2 LINE L2 3121 3249 -23 231 260 0 0 chr20 12772422 12772472 -53895533 - L2 LINE L2 -2 3270 3221 486 0 0 0 chr20 12772827 12772881 -53895124 + (TG)n Simple_repeat Simple_repeat 2 55 0 294 283 121 10 chr20 12772890 12772989 -53895016 - MIR SINE MIR -152 110 1 224 266 152 0 chr20 12773466 12773545 -53894460 - MIR SINE MIR -78 184 94 518 311 16 55 chr20 12774170 12774353 -53893652 + MER5A DNA MER1_type 14 189 0 373 257 33 53 chr20 12776033 12776185 -53891820 - MIR SINE MIR -1 261 113 315 358 69 35 chr20 12777591 12777764 -53890241 - L1ME3A LINE L1 -29 6141 5963 23 54 0 0 chr20 12778888 12778925 -53889080 + AT_rich Low_complexity Low_complexity 1 37 0 284 333 91 16 chr20 12778949 12779135 -53888870 + MIR SINE MIR 5 204 -58 336 185 0 0 chr20 12780158 12780223 -53887782 + L2 LINE L2 3202 3266 -6 1452 254 55 25 chr20 12781031 12781464 -53886541 - LTR16A1 LTR ERVL -11 446 1 22 0 0 0 chr20 12781481 12781503 -53886502 + AT_rich Low_complexity Low_complexity 1 22 0 42444 53 5 2 chr20 12781718 12787836 -53880169 - L1PA5 LINE L1 -6 6148 11 382 216 49 10 chr20 12788470 12788572 -53879433 + MLT1J2 LTR MaLR 1 106 -344 1533 227 119 45 chr20 12788574 12789063 -53878942 - MLT1F LTR MaLR -2 540 16 380 317 22 54 chr20 12789064 12789288 -53878717 + MLT1J2 LTR MaLR 109 325 -125 206 231 15 0 chr20 12789340 12789405 -53878600 + CT-rich Low_complexity Low_complexity 1 66 0 1516 189 26 71 chr20 12791534 12791679 -53876326 + MLT1A1 LTR MaLR 1 151 -214 6905 15 6 2 chr20 12791679 12792479 -53875526 + L1PA3 LINE L1 5353 6155 0 1516 189 26 71 chr20 12792479 12792715 -53875290 + MLT1A1 LTR MaLR 151 365 0 606 270 80 48 chr20 12792715 12793044 -53874961 + MLT1H LTR MaLR 41 393 -202 1704 246 89 13 chr20 12793117 12793658 -53874347 - L1MD3 LINE L1 -10 7985 7404 601 133 25 0 chr20 12793757 12793877 -53874128 + (TAGA)n Simple_repeat Simple_repeat 2 124 0 316 265 99 76 chr20 12794633 12794803 -53873202 - L2 LINE L2 -57 3256 3091 1736 134 56 54 chr20 12794803 12795176 -53872829 - THE1C LTR MaLR 0 375 2 316 265 99 76 chr20 12795176 12795348 -53872657 - L2 LINE L2 -222 3091 2906 2297 75 0 26 chr20 12796744 12797051 -53870954 - AluY SINE Alu -12 299 1 1614 265 40 15 chr20 12797158 12797254 -53870751 - MER110 LTR ERV1 0 491 399 2246 143 94 8 chr20 12797254 12797646 -53870359 - MSTB LTR MaLR 0 426 1 1614 265 40 15 chr20 12797646 12798028 -53869977 - MER110 LTR ERV1 -92 399 1 22531 46 1 4 chr20 12798338 12801952 -53866053 - L1PA5 LINE L1 -4 6150 2547 1292 162 40 27 chr20 12802023 12802344 -53865661 + L1MC/D LINE L1 1718 2147 -4418 307 204 54 21 chr20 12802316 12802409 -53865596 + L1MC/D LINE L1 2059 2154 -4272 * 2089 245 146 29 chr20 12802406 12802798 -53865207 + L1MC/D LINE L1 4240 4585 -1841 2595 68 0 0 chr20 12802798 12803107 -53864898 + AluY SINE Alu 3 311 0 2089 245 146 29 chr20 12803107 12803652 -53864353 + L1MC/D LINE L1 4585 5287 -1139 * 3575 224 56 13 chr20 12803651 12805132 -53862873 + L1MB8 LINE L1 4642 6178 0 2645 189 38 1 chr20 12805129 12805912 -53862093 + L1MC/D LINE L1 5272 6084 -743 * 4310 197 93 45 chr20 12805902 12807071 -53860934 + L1MC3 LINE L1 6538 7762 -23 249 289 167 34 chr20 12808171 12808410 -53859595 - L2 LINE L2 -664 2650 2380 855 339 55 18 chr20 12808413 12808847 -53859158 - LTR16A LTR ERVL 0 450 1 252 301 20 111 chr20 12809133 12809226 -53858779 - L2 LINE L2 -988 2326 2259 2347 106 0 0 chr20 12809226 12809538 -53858467 - AluSx SINE Alu 0 312 1 252 301 20 111 chr20 12809538 12809643 -53858362 - L2 LINE L2 -1055 2259 2146 348 295 154 32 chr20 12809680 12809796 -53858209 - MER5A DNA MER1_type -6 183 42 2213 105 3 0 chr20 12809796 12810082 -53857923 + AluSx SINE Alu 3 289 -23 348 295 154 32 chr20 12810082 12810121 -53857884 - MER5A DNA MER1_type -147 42 9 327 299 153 0 chr20 12810785 12810942 -53857063 - LTR16C LTR ERVL 0 491 311 192 163 0 0 chr20 12812194 12812237 -53855768 + T-rich Low_complexity Low_complexity 1 43 0 4497 176 30 13 chr20 12812488 12813442 -53854563 - L1PB4 LINE L1 0 6156 5213 3417 193 4 8 chr20 12813435 12814154 -53853851 + L1 LINE L1 4379 5094 -1052 * 232 313 154 2 chr20 12814205 12814349 -53853656 - MIR SINE MIR -29 179 15 963 244 102 68 chr20 12814964 12815317 -53852688 + LTR16A1 LTR ERVL 1 365 -92 2209 293 157 23 chr20 12815812 12817271 -53850734 + L2 LINE L2 1640 3294 -19 4168 148 41 56 chr20 12817273 12818155 -53849850 - L1MA10 LINE L1 -4 6330 5462 1576 223 87 11 chr20 12818164 12818795 -53849210 + L1P5 LINE L1 4849 5522 -629 246 128 0 0 chr20 12822399 12822438 -53845567 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 23 33 0 0 chr20 12824594 12824624 -53843381 + AT_rich Low_complexity Low_complexity 1 30 0 549 256 52 70 chr20 12824810 12825138 -53842867 + HAL1 LINE L1 958 1279 -1228 760 272 40 72 chr20 12825152 12825633 -53842372 - L2 LINE L2 -4 3309 2769 510 315 93 42 chr20 12825857 12826362 -53841643 - L1M4 LINE L1 -2509 3637 3107 22 0 0 0 chr20 12826465 12826487 -53841518 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr20 12826752 12826772 -53841233 + (A)n Simple_repeat Simple_repeat 1 20 0 210 208 0 0 chr20 12827451 12827504 -53840501 + (TA)n Simple_repeat Simple_repeat 2 54 0 2060 148 45 28 chr20 12827606 12827964 -53840041 - THE1B LTR MaLR 0 364 1 11305 99 6 11 chr20 12827964 12829057 -53838948 - THE1B-int LTR MaLR 0 1580 497 2792 19 0 3 chr20 12829057 12829367 -53838638 - AluYa5 SINE Alu -2 309 1 11305 99 6 11 chr20 12829367 12829853 -53838152 - THE1B-int LTR MaLR -1083 497 10 2004 137 64 14 chr20 12829853 12830197 -53837808 - THE1B LTR MaLR -3 361 1 40168 37 25 2 chr20 12830320 12836330 -53831675 + L1PA3 LINE L1 1 6155 0 237 33 0 0 chr20 12836344 12836374 -53831631 + (A)n Simple_repeat Simple_repeat 1 30 0 472 290 0 0 chr20 12836852 12836990 -53831015 + L1MC5 LINE L1 6700 6837 -1124 620 256 77 4 chr20 12836990 12837040 -53830965 + L1MD2 LINE L1 6083 6128 -231 315 0 0 0 chr20 12837040 12837075 -53830930 + (CA)n Simple_repeat Simple_repeat 2 36 0 620 256 77 4 chr20 12837075 12837270 -53830735 + L1MD2 LINE L1 6128 6346 -13 1008 234 91 102 chr20 12837280 12837815 -53830190 + L1MC5 LINE L1 6815 7354 -607 1650 143 73 33 chr20 12837815 12838115 -53829890 + AluSx SINE Alu 1 312 0 467 179 0 0 chr20 12838123 12838218 -53829787 + L1PA8 LINE L1 6074 6168 -4 1008 234 91 102 chr20 12838218 12838796 -53829209 + L1MC5 LINE L1 7361 7925 -36 1907 231 62 21 chr20 12839571 12840086 -53827919 - MLT1F LTR MaLR 0 542 7 625 281 180 32 chr20 12840155 12840427 -53827578 - MLT1H1 LTR MaLR -9 546 315 1683 179 0 24 chr20 12840427 12840723 -53827282 - AluJo SINE Alu -19 293 5 625 281 180 32 chr20 12840723 12840884 -53827121 - MLT1H1 LTR MaLR -240 315 49 461 266 140 0 chr20 12840974 12841117 -53826888 - MER5B DNA MER1_type -8 170 8 213 65 0 0 chr20 12842757 12842788 -53825217 + (A)n Simple_repeat Simple_repeat 1 31 0 952 224 246 29 chr20 12844494 12844909 -53823096 - MLT1D LTR MaLR 0 505 1 250 333 79 30 chr20 12845690 12845855 -53822150 + L2 LINE L2 3121 3293 -20 2107 150 0 0 chr20 12847587 12847893 -53820112 + AluSx SINE Alu 1 306 -6 276 30 0 0 chr20 12847933 12847966 -53820039 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 385 161 69 0 chr20 12848455 12848542 -53819463 + L1MB7 LINE L1 6083 6175 -9 2268 173 37 22 chr20 12849227 12849739 -53818266 - LTR27 LTR ERV1 -11 490 2 279 0 0 0 chr20 12849750 12849781 -53818224 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1140 187 83 57 chr20 12849847 12849964 -53818041 + Charlie1 DNA MER1_type 2343 2455 -306 1608 176 9 47 chr20 12849964 12850283 -53817722 - AluJo SINE Alu -5 307 1 1140 187 83 57 chr20 12850283 12850550 -53817455 + Charlie1 DNA MER1_type 2455 2737 -24 449 263 40 51 chr20 12851073 12851163 -53816842 + MIR SINE MIR 47 136 -126 2549 123 3 3 chr20 12851163 12851538 -53816467 - THE1C LTR MaLR 0 375 1 449 263 40 51 chr20 12851538 12851622 -53816383 + MIR SINE MIR 136 219 -43 25978 83 6 3 chr20 12852216 12856783 -53811222 + L1PA7 LINE L1 1581 6153 -1 269 155 0 17 chr20 12856829 12856887 -53811118 + MER116 DNA Mariner 9 65 -15 1796 173 3 3 chr20 12857009 12857322 -53810683 + AluJb SINE Alu 1 313 0 356 237 23 23 chr20 12858892 12859023 -53808982 - MLT1I LTR MaLR -269 140 10 256 268 0 2 chr20 12860773 12860832 -53807173 - MER5B DNA MER1_type -60 118 66 313 220 53 38 chr20 12861373 12861505 -53806500 + HAL1 LINE L1 2229 2362 -145 1500 230 54 19 chr20 12862172 12862215 -53805790 + Charlie4a DNA MER1_type 5 45 -1916 240 35 0 0 chr20 12862215 12862244 -53805761 + (TGAA)n Simple_repeat Simple_repeat 2 30 0 1500 230 54 19 chr20 12862244 12862683 -53805322 + Charlie4a DNA MER1_type 45 504 -4 1191 219 48 37 chr20 12862694 12863293 -53804712 - MLT1E1 LTR MaLR 0 654 1 264 20 20 59 chr20 12864583 12864634 -53803371 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 1294 261 46 13 chr20 12865277 12865730 -53802275 - Charlie4a DNA MER1_type -5 503 36 205 333 95 0 chr20 12866436 12866541 -53801464 - L2 LINE L2 -1 3271 3157 216 0 0 0 chr20 12866634 12866658 -53801347 + (CAAAAA)n Simple_repeat Simple_repeat 4 27 0 262 191 0 0 chr20 12867795 12867842 -53800163 + (CA)n Simple_repeat Simple_repeat 1 47 0 416 332 64 33 chr20 12868282 12868643 -53799362 - LTR16A LTR ERVL -76 374 3 853 254 15 0 chr20 12868700 12868901 -53799104 - MLT1A1 LTR MaLR 0 365 162 900 167 11 11 chr20 12868963 12869137 -53798868 - MLT1A1 LTR MaLR -177 188 15 406 218 105 24 chr20 12870001 12870125 -53797880 + MLT1J2 LTR MaLR 41 174 -276 397 214 84 7 chr20 12870171 12870324 -53797681 + MLT1J2 LTR MaLR 273 380 -29 672 233 186 12 chr20 12870370 12870623 -53797382 - LTR16A1 LTR ERVL -1 456 160 216 0 0 0 chr20 12871634 12871658 -53796347 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 1416 265 103 11 chr20 12871933 12872397 -53795608 + MLT1H LTR MaLR 41 547 -2 22 56 0 0 chr20 12872761 12872797 -53795208 + AT_rich Low_complexity Low_complexity 1 36 0 2870 293 110 45 chr20 12873710 12873809 -53794196 + L2 LINE L2 1388 1479 -1834 5093 141 35 8 chr20 12873809 12874684 -53793321 + MER4D LTR ERV1 2 900 -3 2870 293 110 45 chr20 12874684 12875562 -53792443 + L2 LINE L2 1479 2299 -1014 1993 113 18 0 chr20 12875562 12875872 -53792133 - AluSc SINE Alu 0 315 1 2870 293 110 45 chr20 12875872 12876524 -53791481 + L2 LINE L2 2299 3124 -189 2289 72 21 14 chr20 12876541 12876832 -53791173 + AluY SINE Alu 1 293 -18 742 200 8 0 chr20 12876835 12876960 -53791045 - AluJo/FLAM SINE Alu -176 126 1 438 274 21 42 chr20 12877130 12877320 -53790685 + MLT1H LTR MaLR 72 257 -292 208 225 0 0 chr20 12877550 12877590 -53790415 + L2 LINE L2 3231 3270 -2 611 280 104 36 chr20 12877681 12877960 -53790045 + MLT1I LTR MaLR 99 396 -13 286 342 26 9 chr20 12878073 12878187 -53789818 + MIR SINE MIR 25 140 -68 220 313 0 15 chr20 12878570 12878637 -53789368 + L2 LINE L2 3248 3313 0 1544 174 13 74 chr20 12878824 12879135 -53788870 + AluJo SINE Alu 1 292 -20 411 296 153 25 chr20 12880245 12880441 -53787564 - MIR SINE MIR -26 236 16 205 311 31 19 chr20 12880460 12880621 -53787384 + (TCTA)n Simple_repeat Simple_repeat 2 164 0 * 293 337 0 6 chr20 12880559 12880731 -53787274 + CT-rich Low_complexity Low_complexity 2 172 0 315 244 35 0 chr20 12880744 12880830 -53787175 + (TCCA)n Simple_repeat Simple_repeat 1 89 0 1373 239 16 16 chr20 12881116 12881679 -53786326 + LTR40a LTR ERVL 12 517 -2 256 349 33 7 chr20 12882340 12882492 -53785513 + LTR16C LTR ERVL 306 461 -30 655 262 45 49 chr20 12882525 12882769 -53785236 + MIR SINE MIR 20 262 0 700 206 49 80 chr20 12884333 12884792 -53783213 - MLT1F1 LTR MaLR -5 562 11 400 151 90 12 chr20 12885173 12885399 -53782606 + (TA)n Simple_repeat Simple_repeat 1 243 0 330 170 44 13 chr20 12885422 12885581 -53782424 + (TA)n Simple_repeat Simple_repeat 2 165 0 211 97 83 28 chr20 12885625 12885697 -53782308 + (TA)n Simple_repeat Simple_repeat 2 77 0 1978 219 24 13 chr20 12886436 12886898 -53781107 - MLT1C LTR MaLR 0 467 1 205 281 67 11 chr20 12887152 12887241 -53780764 + L2 LINE L2 2583 2676 -638 683 199 8 15 chr20 12887821 12887952 -53780053 - FLAM_C SINE Alu -2 131 2 225 149 21 21 chr20 12888246 12888293 -53779712 - MER96B DNA MER1_type? -178 239 193 785 217 32 18 chr20 12888562 12888779 -53779226 + MER96B DNA MER1_type? 197 416 -1 419 287 49 0 chr20 12888810 12888932 -53779073 + LTR16C LTR ERVL 359 486 -5 424 237 21 11 chr20 12889092 12889185 -53778820 + MER21B LTR ERV1 1 94 -769 524 271 43 0 chr20 12889231 12889371 -53778634 + MER21B LTR ERV1 103 248 -615 1249 196 57 99 chr20 12889424 12889847 -53778158 + MER21B LTR ERV1 416 812 -51 266 125 54 18 chr20 12890880 12890936 -53777069 + L1ME LINE L1 5687 5744 -377 40 0 0 0 chr20 12891131 12891171 -53776834 + AT_rich Low_complexity Low_complexity 1 40 0 463 312 69 30 chr20 12891333 12891535 -53776470 + MER63A DNA MER1_type 1 210 0 248 274 108 10 chr20 12891944 12892046 -53775959 - MIR3 SINE MIR -10 198 87 417 283 184 7 chr20 12893343 12893495 -53774510 + MER5A DNA MER1_type 9 187 -2 2379 68 0 0 chr20 12894405 12894697 -53773308 + AluY SINE Alu 1 292 -19 413 294 111 13 chr20 12894744 12894897 -53773108 - MIR3 SINE MIR -18 190 23 630 237 23 23 chr20 12895712 12895889 -53772116 + MER5B DNA MER1_type 2 178 0 277 194 45 15 chr20 12895903 12895970 -53772035 - MER5A DNA MER1_type -6 183 115 558 284 91 17 chr20 12895992 12896168 -53771837 + MER5A DNA MER1_type 1 189 0 1741 166 61 0 chr20 12896930 12897208 -53770797 - AluSq SINE Alu -18 295 1 2223 125 0 3 chr20 12897268 12897581 -53770424 - AluSx SINE Alu 0 312 1 232 244 73 49 chr20 12897619 12897701 -53770304 + MER34 LTR ERV1 1 84 -458 486 205 138 20 chr20 12897732 12897927 -53770078 + LTR48 LTR ERV1 160 377 -410 216 0 0 0 chr20 12898274 12898298 -53769707 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 390 194 59 49 chr20 12899606 12899779 -53768226 + MER34 LTR ERV1 450 542 0 703 239 46 9 chr20 12900944 12901162 -53766843 + LTR33 LTR ERVL 289 514 -7 1217 233 86 24 chr20 12902350 12902805 -53765200 + L1ME3A LINE L1 5582 6064 -106 241 229 110 37 chr20 12903215 12903324 -53764681 + MLT1I LTR MaLR 21 137 -272 341 284 0 0 chr20 12903434 12903515 -53764490 - MER5A DNA MER1_type -103 86 6 277 227 76 0 chr20 12903520 12903586 -53764419 + MIR SINE MIR 112 182 -80 2067 117 0 0 chr20 12903732 12904014 -53763991 + AluSx SINE Alu 5 286 -26 301 58 39 0 chr20 12904014 12904066 -53763939 + (TA)n Simple_repeat Simple_repeat 2 55 0 507 270 169 0 chr20 12904083 12904261 -53763744 + MIR SINE MIR 49 256 -6 941 267 105 45 chr20 12904423 12905019 -53762986 + L2 LINE L2 2678 3308 -5 720 307 61 16 chr20 12905188 12905563 -53762442 - LTR16A LTR ERVL -2 448 57 606 314 25 63 chr20 12905631 12905994 -53762011 - L2 LINE L2 -69 3244 2896 462 233 10 0 chr20 12907443 12907546 -53760459 - LTR16A1 LTR ERVL -18 439 336 2585 216 34 26 chr20 12907986 12908860 -53759145 - L1MB5 LINE L1 -164 6010 5127 7647 22 2 0 chr20 12908890 12910067 -53757938 - L1PA3 LINE L1 -2 6153 4975 2263 229 38 10 chr20 12910090 12910944 -53757061 - L1MB5 LINE L1 -2753 3393 2429 719 285 111 89 chr20 12910984 12911974 -53756031 - L1M4 LINE L1 -1402 4744 3733 21 0 0 0 chr20 12912073 12912094 -53755911 + AT_rich Low_complexity Low_complexity 1 21 0 2262 101 0 0 chr20 12912257 12912545 -53755460 + AluSg SINE Alu 1 288 -22 285 235 0 24 chr20 12912687 12912772 -53755233 + (TA)n Simple_repeat Simple_repeat 2 84 0 812 229 45 76 chr20 12912856 12913415 -53754590 + L1MC/D LINE L1 5077 5617 -625 * 6249 198 13 44 chr20 12913385 12915326 -53752679 - L1M1 LINE L1 -689 5467 3618 4356 217 13 40 chr20 12915328 12915660 -53752345 - L1PBb LINE L1 -3996 2853 2514 2304 105 3 3 chr20 12915660 12915966 -53752039 + AluSp SINE Alu 1 306 -7 4356 217 13 40 chr20 12915966 12916287 -53751718 - L1PBb LINE L1 -4335 2514 2186 23468 31 3 3 chr20 12916287 12919896 -53748109 + L1PA3 LINE L1 2544 6155 0 4356 217 13 40 chr20 12919896 12920625 -53747380 - L1PBb LINE L1 -4663 2186 1419 765 234 21 0 chr20 12921023 12921211 -53746794 - L1PBb LINE L1 -5323 1527 1336 * 3754 206 18 11 chr20 12921191 12922436 -53745569 - L1PA15-16 LINE L1 -5280 1569 11 428 273 29 29 chr20 12922449 12922621 -53745384 + L1MCa LINE L1 1073 1244 -5182 28 0 0 0 chr20 12923340 12923368 -53744637 + AT_rich Low_complexity Low_complexity 1 28 0 285 29 0 0 chr20 12923828 12923862 -53744143 + (TG)n Simple_repeat Simple_repeat 2 35 0 422 296 69 60 chr20 12924021 12924338 -53743667 + MLT1I LTR MaLR 65 384 -25 501 348 40 18 chr20 12924446 12924774 -53743231 + LTR16B LTR ERVL 63 397 -67 239 252 39 52 chr20 12926632 12926787 -53741218 - L1ME LINE L1 -247 5919 5767 341 245 64 27 chr20 12926810 12926998 -53741007 - L1ME LINE L1 -901 5245 5051 228 293 70 15 chr20 12927055 12927328 -53740677 - L1ME LINE L1 -3672 2474 2187 351 280 60 0 chr20 12927962 12928062 -53739943 - MLT1H LTR MaLR -195 354 249 351 271 81 51 chr20 12930094 12930330 -53737675 - MER102b DNA MER1_type 0 341 99 2759 169 7 31 chr20 12930651 12931203 -53736802 - MER34B LTR ERV1 -26 539 1 305 247 133 40 chr20 12931435 12931585 -53736420 + L1MCa LINE L1 2565 2728 -3698 1464 261 91 63 chr20 12931860 12933324 -53734681 + L1MCa LINE L1 2735 4238 -2188 1179 168 0 5 chr20 12933330 12933521 -53734484 + AluJo SINE Alu 2 191 -121 2603 97 51 14 chr20 12933521 12933953 -53734052 + LTR7 LTR ERV1 1 448 -2 16299 89 20 11 chr20 12933955 12936874 -53731131 + HERVH LTR ERV1 1 2995 -4718 939 120 7 0 chr20 12936853 12937003 -53731002 + HERVH LTR ERV1 3140 3290 -4423 * 3136 115 6 6 chr20 12936993 12937497 -53730508 + HERVH LTR ERV1 3492 3995 -3718 4167 137 0 1 chr20 12937497 12938160 -53729845 + HERVH LTR ERV1 4488 5149 -2564 1304 128 18 9 chr20 12938161 12938379 -53729626 + HERVH LTR ERV1 5600 5819 -1894 * 2362 88 39 16 chr20 12938376 12938760 -53729245 + HERVH LTR ERV1 7321 7713 0 2625 95 51 14 chr20 12938760 12939192 -53728813 + LTR7 LTR ERV1 1 448 -2 476 238 20 0 chr20 12939192 12939293 -53728712 + AluJo SINE Alu 185 287 -25 416 283 60 20 chr20 12939421 12939480 -53728525 + L1MCa LINE L1 4384 4439 -1987 2112 120 13 26 chr20 12939480 12939789 -53728216 + AluSg SINE Alu 1 305 -5 416 283 60 20 chr20 12939789 12939980 -53728025 + L1MCa LINE L1 4439 4644 -1782 2491 131 2 60 chr20 12940213 12940665 -53727340 + LTR9 LTR ERV1 1 426 -186 1657 268 107 26 chr20 12940794 12941890 -53726115 + L1MCa LINE L1 4781 6013 -437 1618 141 52 0 chr20 12941890 12942138 -53725867 + AluJb SINE Alu 3 263 -49 1657 268 107 26 chr20 12942138 12942365 -53725640 + L1MCa LINE L1 6013 6220 -230 282 219 0 0 chr20 12942448 12942521 -53725484 + L1ME3A LINE L1 6364 6436 -14 24 32 0 0 chr20 12942521 12942552 -53725453 + AT_rich Low_complexity Low_complexity 1 31 0 258 339 70 11 chr20 12942999 12943185 -53724820 + MIR SINE MIR 53 249 -13 976 226 108 79 chr20 12944841 12945311 -53722694 + MLT1D LTR MaLR 19 502 -3 922 239 14 5 chr20 12946584 12946806 -53721199 - MER58A DNA MER1_type 0 224 1 1413 179 29 71 chr20 12947062 12947370 -53720635 - AluJo SINE Alu -17 295 1 837 185 0 0 chr20 12947370 12947505 -53720500 - AluJo SINE Alu -177 135 1 979 265 191 5 chr20 12948613 12949058 -53718947 - MLT1H LTR MaLR -19 530 3 27 49 0 0 chr20 12949097 12949138 -53718867 + AT_rich Low_complexity Low_complexity 1 41 0 1197 289 34 22 chr20 12949287 12949703 -53718302 + L1MD2 LINE L1 36 456 -5940 941 240 56 30 chr20 12949700 12950163 -53717842 + L1MD2 LINE L1 1027 1501 -4895 * 1212 208 16 73 chr20 12950176 12950560 -53717445 + L1MD2 LINE L1 3832 4193 -2022 282 213 0 0 chr20 12950584 12950645 -53717360 + L1MD2 LINE L1 4325 4385 -1830 659 177 64 0 chr20 12950678 12950819 -53717186 + L1MA10 LINE L1 6182 6331 -3 2287 102 0 3 chr20 12950835 12951130 -53716875 + AluSx SINE Alu 1 294 -18 180 0 0 0 chr20 12951133 12951153 -53716852 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2588 52 3 0 chr20 12953252 12953557 -53714448 - AluY SINE Alu -5 306 1 192 238 0 0 chr20 12953821 12953884 -53714121 + (TA)n Simple_repeat Simple_repeat 1 63 0 2411 245 62 15 chr20 12954417 12955224 -53712781 - L1ME3 LINE L1 -3 6159 5315 2561 60 0 0 chr20 12955239 12955541 -53712464 + AluY SINE Alu 1 302 -9 448 308 96 42 chr20 12955634 12955988 -53712017 + L1MD2 LINE L1 5354 5726 -507 252 268 24 0 chr20 12955989 12956071 -53711934 + L1MD2 LINE L1 5754 5837 -353 840 240 22 0 chr20 12956250 12956429 -53711576 + MER5A DNA MER1_type 2 184 -5 374 212 178 17 chr20 12958307 12958425 -53709580 - MIR SINE MIR -50 212 76 379 321 5 5 chr20 12958581 12958768 -53709237 - L1ME LINE L1 -312 5809 5623 3564 191 21 15 chr20 12958919 12959725 -53708280 - L1MD1 LINE L1 -5 6237 5427 26 0 0 0 chr20 12959812 12959838 -53708167 + AT_rich Low_complexity Low_complexity 1 26 0 1039 197 119 63 chr20 12959899 12960234 -53707771 - MLT1A1 LTR MaLR -8 357 4 23 68 0 0 chr20 12960256 12960300 -53707705 + AT_rich Low_complexity Low_complexity 1 44 0 206 388 23 0 chr20 12960802 12960931 -53707074 + MIR SINE MIR 52 183 -79 1219 244 66 12 chr20 12961581 12961868 -53706137 + MER58B DNA MER1_type 1 308 -2112 234 0 0 0 chr20 12961868 12961894 -53706111 + (CTTA)n Simple_repeat Simple_repeat 3 28 0 1219 244 66 12 chr20 12961894 12961926 -53706079 + MER58B DNA MER1_type 308 337 -4 188 320 0 64 chr20 12962072 12962150 -53705855 - L3 LINE CR1 -238 1339 1267 507 271 161 0 chr20 12962673 12962828 -53705177 + MER5A DNA MER1_type 8 187 -2 2235 221 53 8 chr20 12963119 12963706 -53704299 + L1MD2 LINE L1 5816 6428 0 2251 85 10 17 chr20 12964530 12964825 -53703180 + AluSg SINE Alu 1 293 -17 218 321 110 43 chr20 12965251 12965460 -53702545 + MIR SINE MIR 20 242 -20 486 333 86 35 chr20 12966088 12966541 -53701464 + MLT1K LTR MaLR 1 476 0 1179 248 59 30 chr20 12968092 12968531 -53699474 - LTR16A1 LTR ERVL -5 452 1 957 76 0 8 chr20 12968777 12968909 -53699096 - AluSg/x SINE Alu 0 312 182 1178 257 143 80 chr20 12969422 12970252 -53697753 + L1MC4 LINE L1 6937 7844 -198 2369 85 0 0 chr20 12970252 12970546 -53697459 + AluY SINE Alu 1 294 -17 1178 257 143 80 chr20 12970546 12970731 -53697274 + L1MC4 LINE L1 7844 8016 -26 2876 223 47 1 chr20 12970763 12971476 -53696529 + L1 LINE L1 3510 4262 -1884 510 17 0 0 chr20 12971476 12971535 -53696470 + (CA)n Simple_repeat Simple_repeat 1 59 0 2876 223 47 1 chr20 12971535 12971589 -53696416 + L1 LINE L1 4262 4312 -1834 968 259 12 8 chr20 12971715 12971974 -53696031 - MIR SINE MIR 0 262 3 272 300 30 0 chr20 12974331 12974431 -53693574 + MLT1I LTR MaLR 305 407 -2 2212 127 75 0 chr20 12974587 12974934 -53693071 + THE1C LTR MaLR 1 373 -2 9107 111 77 8 chr20 12974934 12976394 -53691611 + THE1C-int LTR MaLR 20 1580 0 2574 116 11 0 chr20 12976394 12976765 -53691240 + THE1C LTR MaLR 1 375 0 1480 92 0 0 chr20 12977169 12977388 -53690617 - AluY SINE Alu 0 316 98 24 0 0 0 chr20 12978602 12978626 -53689379 + AT_rich Low_complexity Low_complexity 1 24 0 13261 195 32 27 chr20 12979420 12983198 -53684807 + L1M2 LINE L1 5 3803 -3045 3035 118 6 2 chr20 12983198 12983670 -53684335 + L1MA4A LINE L1 5821 6296 -7 268 53 0 15 chr20 12985728 12985916 -53682089 + AluY SINE Alu 43 300 -2 237 335 155 25 chr20 12986283 12986444 -53681561 + MIR SINE MIR 4 185 -77 1655 192 20 6 chr20 12986657 12987000 -53681005 - MLT1A1 LTR MaLR -17 348 1 453 236 18 0 chr20 12987003 12987113 -53680892 - MLT1H LTR MaLR -213 336 225 250 235 62 74 chr20 12988524 12988605 -53679400 + MIR SINE MIR 35 114 -148 674 275 87 0 chr20 12988661 12988890 -53679115 - LTR16A1 LTR ERVL -30 427 179 540 266 12 18 chr20 12990597 12990766 -53677239 - MLT1H LTR MaLR 0 549 382 1238 147 30 35 chr20 12990827 12991058 -53676947 - MER30 DNA MER1_type 0 230 1 2610 180 10 68 chr20 12991165 12991753 -53676252 - MER41C LTR ERV1 0 554 1 697 211 8 0 chr20 12991960 12992083 -53675922 + FLAM_A SINE Alu 1 124 -9 1016 298 83 14 chr20 12992778 12993197 -53674808 + LTR16C LTR ERVL 44 491 0 271 327 29 0 chr20 12993279 12993383 -53674622 - MIR3 SINE MIR -6 202 96 291 271 0 17 chr20 12993502 12993620 -53674385 + (TATAA)n Simple_repeat Simple_repeat 4 119 0 537 281 47 12 chr20 12993738 12993909 -53674096 - MER5B DNA MER1_type -1 177 1 24 0 0 0 chr20 12993996 12994020 -53673985 + AT_rich Low_complexity Low_complexity 1 24 0 2117 194 75 8 chr20 12994127 12994597 -53673408 + MLT1D LTR MaLR 5 505 0 201 195 0 0 chr20 12995031 12995072 -53672933 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 761 203 39 0 chr20 12995133 12995315 -53672690 - MER53 DNA DNA 0 189 1 342 345 18 0 chr20 12995481 12995591 -53672414 - L2 LINE L2 0 3313 3202 202 216 20 20 chr20 12995624 12995675 -53672330 + L2 LINE L2 3216 3266 -6 28 0 0 0 chr20 12996132 12996160 -53671845 + AT_rich Low_complexity Low_complexity 1 28 0 14426 194 33 23 chr20 12996200 12996658 -53671347 - L1MA3 LINE L1 -20 7704 7252 2063 126 7 0 chr20 12996658 12996952 -53671053 - AluSx SINE Alu -16 296 1 14426 194 33 23 chr20 12996952 12997645 -53670360 - L1MA3 LINE L1 -472 7252 6568 257 0 30 0 chr20 12997645 12997678 -53670327 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 14426 194 33 23 chr20 12997678 13000392 -53667613 - L1MA3 LINE L1 -1156 6568 3884 279 0 0 0 chr20 13000392 13000423 -53667582 + (CA)n Simple_repeat Simple_repeat 2 32 0 14426 194 33 23 chr20 13000423 13003893 -53664112 - L1MA3 LINE L1 -3840 3884 16 2219 212 17 71 chr20 13003903 13004662 -53663343 - L1M4 LINE L1 -1907 4239 3522 71 95 0 0 chr20 13004666 13004877 -53663128 + AT_rich Low_complexity Low_complexity 1 211 0 682 306 20 0 chr20 13004877 13005276 -53662729 - L1M4 LINE L1 -2661 3485 3079 2661 90 3 3 chr20 13005313 13005668 -53662337 + THE1A LTR MaLR 1 355 0 4640 108 10 1 chr20 13005668 13006356 -53661649 + THE1A-int LTR MaLR 1 694 -886 1106 251 84 12 chr20 13006349 13006673 -53661332 - L1PA12 LINE L1 -6570 1011 661 * 6335 94 14 6 chr20 13006673 13007703 -53660302 + L1PA11 LINE L1 5136 6174 0 1655 141 97 64 chr20 13008154 13008558 -53659447 + MSTB1 LTR MaLR 4 420 -12 285 279 178 31 chr20 13008677 13008806 -53659199 + MER5A DNA MER1_type 42 189 0 967 227 61 52 chr20 13009360 13009703 -53658302 - LTR16A1 LTR ERVL 0 457 112 180 0 0 0 chr20 13009875 13009895 -53658110 + (A)n Simple_repeat Simple_repeat 1 20 0 458 265 0 120 chr20 13010038 13010272 -53657733 - LTR16C LTR ERVL 0 491 286 230 300 71 0 chr20 13010653 13010723 -53657282 - L2 LINE L2 0 3313 3239 273 369 85 7 chr20 13010936 13011077 -53656928 + MIR3 SINE MIR 12 163 -45 21 0 0 0 chr20 13011460 13011481 -53656524 + AT_rich Low_complexity Low_complexity 1 21 0 190 261 273 0 chr20 13012419 13012507 -53655498 - L3 LINE CR1 -20 1557 1446 409 228 19 37 chr20 13012567 13012782 -53655223 + CT-rich Low_complexity Low_complexity 1 211 0 274 374 28 0 chr20 13013181 13013288 -53654717 - MIR SINE MIR -144 118 9 2136 126 0 3 chr20 13013801 13014094 -53653911 - AluSx SINE Alu -20 292 1 1804 188 0 25 chr20 13014945 13015265 -53652740 - AluJb SINE Alu 0 312 1 1430 203 3 41 chr20 13015532 13015827 -53652178 + AluJo SINE Alu 1 284 -28 372 43 0 0 chr20 13015832 13015878 -53652127 + (GGA)n Simple_repeat Simple_repeat 3 48 0 194 317 0 17 chr20 13015887 13015947 -53652058 - MIR SINE MIR -201 61 3 1574 163 10 39 chr20 13016412 13016719 -53651286 - AluJo SINE Alu -4 308 11 21 36 0 0 chr20 13016729 13016757 -53651248 + AT_rich Low_complexity Low_complexity 1 28 0 375 235 34 27 chr20 13017196 13017345 -53650660 - L1ME4a LINE L1 -27 6094 5945 541 302 31 59 chr20 13017514 13017769 -53650236 + MIR SINE MIR 11 258 -4 1620 201 10 16 chr20 13017987 13018296 -53649709 - AluJo SINE Alu -5 307 1 207 359 64 0 chr20 13018942 13019020 -53648985 - L2 LINE L2 -254 3018 2936 2090 86 11 0 chr20 13019022 13019338 -53648667 + AluY SINE Alu 1 319 0 574 229 72 24 chr20 13019435 13019601 -53648404 + MER5B DNA MER1_type 1 174 -4 547 324 60 43 chr20 13019740 13019990 -53648015 + MIR SINE MIR 12 261 -1 2563 162 7 21 chr20 13020597 13021030 -53646975 + MSTC LTR MaLR 2 428 0 512 273 82 27 chr20 13021277 13021497 -53646508 + MLT1H1 LTR MaLR 322 553 -2 443 308 30 12 chr20 13022358 13022527 -53645478 + MLT1K LTR MaLR 154 325 -263 1003 243 70 77 chr20 13023236 13023692 -53644313 - LTR16A1 LTR ERVL -1 456 4 229 296 19 9 chr20 13023897 13024005 -53644000 + (TA)n Simple_repeat Simple_repeat 1 109 0 429 203 41 0 chr20 13024506 13024629 -53643376 - LTR37A LTR ERV1 0 426 299 525 250 19 6 chr20 13024700 13024860 -53643145 - MLT1E3 LTR MaLR -78 546 385 324 176 47 12 chr20 13024938 13025023 -53642982 - LTR37B LTR ERV1 -183 285 198 783 270 119 42 chr20 13025408 13025863 -53642142 + MLT1E1 LTR MaLR 1 490 -164 327 143 52 13 chr20 13026080 13026157 -53641848 - L1MC2 LINE L1 -110 6234 6155 713 200 19 19 chr20 13026157 13026317 -53641688 + MLT1E1 LTR MaLR 495 654 0 7494 154 20 2 chr20 13026813 13028939 -53639066 + L1PA13 LINE L1 4031 6163 0 547 198 5 165 chr20 13029343 13029555 -53638450 + MER5B DNA MER1_type 1 178 0 268 287 63 56 chr20 13029590 13029733 -53638272 + MER5A DNA MER1_type 21 164 -25 327 319 0 11 chr20 13030009 13030103 -53637902 - MER5B DNA MER1_type 0 178 86 4254 164 63 29 chr20 13030125 13031083 -53636922 - L1MC2 LINE L1 -15 6329 5340 225 296 0 0 chr20 13031094 13031148 -53636857 - MER5B DNA MER1_type -124 54 1 1307 211 75 67 chr20 13031292 13031680 -53636325 + LTR16C LTR ERVL 101 491 0 220 352 28 0 chr20 13033079 13033187 -53634818 - L2 LINE L2 -1 3271 3161 1961 218 78 30 chr20 13033336 13033942 -53634063 + MER92B LTR ERV1 2 636 0 1231 114 21 114 chr20 13033966 13034245 -53633760 - AluSq SINE Alu 0 325 69 515 204 68 37 chr20 13034246 13034408 -53633597 - MER5A DNA MER1_type -22 167 1 259 294 111 71 chr20 13034471 13035074 -53632931 - L2 LINE L2 -541 2773 2147 614 166 171 68 chr20 13035963 13036168 -53631837 + MER33 DNA MER1_type 2 227 -97 1532 185 15 85 chr20 13036199 13036610 -53631395 - MLT1B LTR MaLR -6 384 3 323 226 0 24 chr20 13036614 13036698 -53631307 + MER33 DNA MER1_type 243 324 0 261 210 0 0 chr20 13036961 13037023 -53630982 + (TTCA)n Simple_repeat Simple_repeat 3 64 0 2497 81 3 0 chr20 13038545 13038879 -53629126 - L1PA7 LINE L1 -3 6151 5817 235 315 34 34 chr20 13039134 13039280 -53628725 + MLT1H LTR MaLR 208 353 -196 207 179 0 0 chr20 13039310 13039349 -53628656 + (CAGCC)n Simple_repeat Simple_repeat 2 40 0 500 229 183 0 chr20 13040184 13040337 -53627668 - MER5A DNA MER1_type 0 189 9 196 232 232 42 chr20 13040403 13040498 -53627507 - MIR3 SINE MIR -92 116 4 1649 85 0 0 chr20 13040694 13040918 -53627087 - L1PA13 LINE L1 -8 6155 5932 1940 102 16 10 chr20 13040920 13041223 -53626782 + L1PA13 LINE L1 5623 5927 -236 28 29 0 0 chr20 13041817 13041852 -53626153 + AT_rich Low_complexity Low_complexity 1 35 0 263 345 57 48 chr20 13041918 13042127 -53625878 + L2 LINE L2 2918 3128 -144 202 279 0 15 chr20 13042847 13042915 -53625090 + A-rich Low_complexity Low_complexity 2 68 0 21 0 0 0 chr20 13043293 13043314 -53624691 + AT_rich Low_complexity Low_complexity 1 21 0 1824 184 62 28 chr20 13043546 13043566 -53624439 + L1MA9 LINE L1 5804 5822 -490 498 180 86 55 chr20 13043566 13043694 -53624311 + FLAM_A SINE Alu 1 132 -1 1824 184 62 28 chr20 13043694 13044127 -53623878 + L1MA9 LINE L1 5822 6275 -37 469 203 49 16 chr20 13044533 13044656 -53623349 + MER3 DNA MER1_type 83 209 0 417 197 13 0 chr20 13044656 13044693 -53623312 - MER3 DNA MER1_type -162 47 10 232 204 6 42 chr20 13044808 13044880 -53623125 + MLT1H LTR MaLR 68 159 -268 374 241 153 7 chr20 13045000 13045137 -53622868 + MLT1H LTR MaLR 355 511 -38 763 252 127 67 chr20 13047059 13047638 -53620367 - MLT1G LTR MaLR -6 584 1 758 329 59 33 chr20 13047729 13048066 -53619939 + L3 LINE CR1 706 1051 -526 3531 294 217 15 chr20 13048075 13050550 -53617455 - L2 LINE L2 0 3313 328 229 362 8 24 chr20 13050571 13050698 -53617307 + L2 LINE L2 524 648 -2666 219 396 22 0 chr20 13050720 13050811 -53617194 - L2 LINE L2 -3189 125 33 317 322 137 26 chr20 13050836 13051106 -53616899 + L3 LINE CR1 1060 1359 -218 273 170 57 0 chr20 13051169 13051222 -53616783 - MER5C DNA MER1_type -252 72 17 538 280 33 67 chr20 13051240 13051540 -53616465 + MER5C DNA MER1_type 27 316 -8 234 303 134 23 chr20 13051623 13051797 -53616208 + MIR SINE MIR 5 207 -55 203 152 0 177 chr20 13051870 13051949 -53616056 - MER5B DNA MER1_type -17 161 97 1945 152 26 3 chr20 13051998 13052300 -53615705 - AluSx SINE Alu -1 311 3 322 159 0 32 chr20 13052304 13052367 -53615638 + MER5A DNA MER1_type 128 188 -1 201 121 0 0 chr20 13052420 13052453 -53615552 + (TG)n Simple_repeat Simple_repeat 2 34 0 1029 221 22 67 chr20 13052456 13052751 -53615254 - L1ME3 LINE L1 -5 6157 5879 1895 123 68 41 chr20 13052751 13053116 -53614889 - THE1C LTR MaLR 0 375 1 1029 221 22 67 chr20 13053116 13053178 -53614827 - L1ME3 LINE L1 -283 5879 5816 180 0 0 0 chr20 13053181 13053201 -53614804 + (T)n Simple_repeat Simple_repeat 1 20 0 209 315 62 56 chr20 13054158 13054336 -53613669 - MIR SINE MIR -52 210 32 698 297 56 13 chr20 13054870 13055176 -53612829 + LTR16C LTR ERVL 172 490 -1 1316 156 78 71 chr20 13056582 13056981 -53611024 + MER67C LTR ERV1 1 403 -243 305 293 95 0 chr20 13056993 13057109 -53610896 + MER67D LTR ERV1 356 482 -32 802 239 83 23 chr20 13057325 13057543 -53610462 - MIR SINE MIR -2 260 30 516 320 115 33 chr20 13057659 13058050 -53609955 + MLT1H LTR MaLR 124 546 -3 586 309 79 45 chr20 13058482 13058861 -53609144 - MLT1J2 LTR MaLR 0 450 59 742 216 34 29 chr20 13059690 13059894 -53608111 + LTR16A1 LTR ERVL 240 444 -13 208 156 0 0 chr20 13060276 13060308 -53607697 + MIR SINE MIR 87 118 -144 350 253 53 0 chr20 13060479 13060554 -53607451 + L2 LINE L2 3194 3272 0 182 261 62 31 chr20 13061491 13061556 -53606449 + L2 LINE L2 3246 3312 -1 1245 261 48 46 chr20 13062584 13063039 -53604966 - LTR16A1 LTR ERVL 0 457 2 240 302 10 10 chr20 13063143 13063239 -53604766 + MER33 DNA MER1_type 1 96 -228 376 293 79 49 chr20 13063575 13063942 -53604063 - MLT1L LTR MaLR -90 525 148 657 132 24 113 chr20 13063942 13064154 -53603851 - Charlie5 DNA MER1_type 0 2624 2432 442 366 18 9 chr20 13065059 13065283 -53602722 + LTR16C LTR ERVL 155 380 -111 22 35 0 0 chr20 13065422 13065451 -53602554 + AT_rich Low_complexity Low_complexity 1 29 0 466 204 11 0 chr20 13065718 13065806 -53602199 - MER3 DNA MER1_type -74 135 47 2169 193 61 11 chr20 13066118 13066595 -53601410 - L1MCa LINE L1 -5900 526 26 502 312 192 16 chr20 13067953 13068386 -53599619 - L2 LINE L2 -1 3312 2804 308 197 0 30 chr20 13069246 13069312 -53598693 + MER58B DNA MER1_type 263 326 -15 351 272 60 92 chr20 13069405 13069655 -53598350 + L2 LINE L2 3072 3313 0 303 169 48 12 chr20 13070900 13070983 -53597022 - MER96B DNA MER1_type? -236 181 96 326 248 31 23 chr20 13070998 13071127 -53596878 + L1MB1 LINE L1 421 550 -5753 2696 224 22 66 chr20 13071454 13072634 -53595371 + L1MB1 LINE L1 821 1849 -4535 307 295 36 5 chr20 13072643 13072836 -53595169 + L1MB1 LINE L1 1975 2173 -4211 2074 237 32 29 chr20 13072851 13073540 -53594465 + L1MB1 LINE L1 3501 4191 -2191 * 4060 196 58 35 chr20 13073537 13075478 -53592527 + L1MB1 LINE L1 4411 6399 -5 344 235 0 0 chr20 13075479 13075560 -53592445 + MER96B DNA MER1_type? 308 388 -29 895 255 23 64 chr20 13076550 13076895 -53591110 - LTR16A1 LTR ERVL -10 447 117 463 223 61 7 chr20 13077426 13077574 -53590431 - LTR16A1 LTR ERVL 0 457 302 189 358 11 0 chr20 13077600 13077695 -53590310 - MIR SINE MIR -66 142 47 954 285 98 5 chr20 13077731 13078149 -53589856 - LTR16A1 LTR ERVL 0 457 1 2192 115 6 3 chr20 13078745 13079057 -53588948 - AluSp SINE Alu 0 313 1 1374 260 95 13 chr20 13079435 13079889 -53588116 + LTR16C LTR ERVL 1 491 0 1261 245 133 16 chr20 13080760 13081205 -53586800 + MLT1H LTR MaLR 46 542 -7 633 299 86 21 chr20 13081477 13081711 -53586294 - MIR SINE MIR -13 249 1 644 270 47 43 chr20 13081796 13082007 -53585998 - MIR SINE MIR -36 226 15 834 288 81 7 chr20 13082300 13082707 -53585298 + LTR16A1 LTR ERVL 1 437 -20 32 43 0 0 chr20 13082787 13082833 -53585172 + AT_rich Low_complexity Low_complexity 1 46 0 843 221 10 25 chr20 13083679 13083878 -53584127 + MER3 DNA MER1_type 12 207 -2 274 296 0 14 chr20 13084034 13084105 -53583900 + L2 LINE L2 3244 3313 0 5611 229 47 34 chr20 13085682 13086426 -53581579 + L1ME1 LINE L1 -257 476 -5804 405 0 0 0 chr20 13086426 13086471 -53581534 + (CA)n Simple_repeat Simple_repeat 2 46 0 5611 229 47 34 chr20 13086471 13086843 -53581162 + L1ME1 LINE L1 476 842 -5438 2384 65 0 29 chr20 13086843 13087149 -53580856 - AluY SINE Alu -14 297 1 5611 229 47 34 chr20 13087149 13087348 -53580657 + L1ME1 LINE L1 842 1037 -5243 6423 45 5 0 chr20 13087348 13088133 -53579872 + L1PA5 LINE L1 5366 6154 0 5611 229 47 34 chr20 13088133 13088361 -53579644 + L1ME1 LINE L1 1037 1307 -4973 3179 251 18 10 chr20 13088403 13089331 -53578674 + L1M4 LINE L1 2953 3888 -2258 1070 198 30 67 chr20 13089323 13089546 -53578459 + L1ME1 LINE L1 1316 1525 -4859 * 2110 111 3 32 chr20 13089546 13089862 -53578143 + AluSx SINE Alu 1 307 -5 1070 198 30 67 chr20 13089862 13089967 -53578038 + L1ME1 LINE L1 1525 1632 -4752 * 2982 260 8 5 chr20 13089956 13090813 -53577192 - L1PA16 LINE L1 -2279 3867 3008 * 5811 181 33 35 chr20 13090808 13093115 -53574890 + L1PA16 LINE L1 3864 6157 -9 194 0 39 0 chr20 13093158 13093184 -53574821 + (TAA)n Simple_repeat Simple_repeat 1 27 0 794 279 36 47 chr20 13093195 13093869 -53574136 + L1ME1 LINE L1 1637 2435 -4128 1181 197 62 48 chr20 13093879 13094169 -53573836 - MLT1C LTR MaLR -2 465 172 254 172 25 123 chr20 13094256 13094378 -53573627 - MLT1C LTR MaLR -300 167 58 483 63 0 0 chr20 13094388 13094451 -53573554 + (TA)n Simple_repeat Simple_repeat 1 63 0 2732 233 43 19 chr20 13094503 13095386 -53572619 + L1ME1 LINE L1 2404 3307 -3075 4274 221 69 48 chr20 13095425 13096971 -53571034 + L1ME1 LINE L1 3965 5542 -840 1105 204 19 45 chr20 13096995 13097230 -53570775 - L1MB4 LINE L1 -2 6178 5949 2380 102 0 0 chr20 13097230 13097543 -53570462 - AluSq SINE Alu 0 313 1 1105 204 19 45 chr20 13097543 13097571 -53570434 - L1MB4 LINE L1 -231 5949 5922 316 111 222 0 chr20 13097571 13097634 -53570371 - AluS SINE Alu -225 78 2 1632 172 89 0 chr20 13097634 13097971 -53570034 - L1MB4 LINE L1 -230 5950 5584 2663 214 97 13 chr20 13097972 13098758 -53569247 + L1ME1 LINE L1 5558 6395 -7 434 246 27 0 chr20 13101115 13101225 -53566780 + MER81 DNA DNA 2 114 0 525 309 18 73 chr20 13101962 13102237 -53565768 - MIR SINE MIR 0 262 3 23 33 0 0 chr20 13103513 13103543 -53564462 + AT_rich Low_complexity Low_complexity 1 30 0 446 335 164 31 chr20 13103685 13104809 -53563196 - L2 LINE L2 -185 3087 1807 687 243 28 11 chr20 13105027 13105204 -53562801 - MER5A DNA MER1_type 0 189 10 195 129 0 0 chr20 13106151 13106182 -53561823 + (T)n Simple_repeat Simple_repeat 1 31 0 2019 183 17 13 chr20 13106995 13107453 -53560552 + MER89 LTR ERV1 1 559 0 773 317 96 26 chr20 13107468 13107959 -53560046 - L2 LINE L2 -47 3266 2730 863 321 33 40 chr20 13108991 13109412 -53558593 + MLT1J2 LTR MaLR 30 447 -3 871 233 201 72 chr20 13109529 13109914 -53558091 - L1MB8 LINE L1 -2 6176 5711 8800 167 24 5 chr20 13109914 13112275 -53555730 + L1PA14 LINE L1 3767 6144 -17 871 233 201 72 chr20 13112275 13112386 -53555619 - L1MB8 LINE L1 -467 5711 5616 1595 279 48 35 chr20 13112690 13113309 -53554696 + MLT2E LTR ERVL 2 628 0 603 306 48 0 chr20 13114730 13114916 -53553089 + MIR SINE MIR 32 226 -36 511 44 0 0 chr20 13117308 13117376 -53550629 + L1PB3 LINE L1 6085 6152 -2 759 270 141 16 chr20 13117447 13117695 -53550310 + MLT1I LTR MaLR 127 405 -4 1079 230 98 18 chr20 13117749 13118084 -53549921 - MLT1I LTR MaLR -19 390 29 211 341 76 15 chr20 13118111 13118243 -53549762 - MIR SINE MIR -105 157 18 569 266 88 18 chr20 13118400 13118626 -53549379 + MIR SINE MIR 11 252 -10 233 352 0 0 chr20 13118620 13118711 -53549294 - MIR SINE MIR -10 252 162 * 25 0 0 0 chr20 13119549 13119574 -53548431 + AT_rich Low_complexity Low_complexity 1 25 0 224 222 28 14 chr20 13120096 13120111 -53547894 + (TA)n Simple_repeat Simple_repeat 1 14 -968 3794 190 48 24 chr20 13120111 13120988 -53547017 - MER54A LTR ERVL 0 901 4 224 222 28 14 chr20 13120988 13121065 -53546940 + (TA)n Simple_repeat Simple_repeat 14 982 0 1413 206 32 0 chr20 13121854 13122164 -53545841 + L1MB1 LINE L1 5848 6167 -1 2226 112 0 3 chr20 13122222 13122517 -53545488 - AluSq SINE Alu -19 294 1 1375 266 95 27 chr20 13122688 13123202 -53544803 - MLT1H LTR MaLR 0 549 1 1631 248 48 29 chr20 13123213 13123693 -53544312 + MER74B LTR ERVL 57 545 -77 295 211 191 104 chr20 13123966 13124217 -53543788 + MLT1J LTR MaLR 239 511 0 183 243 39 0 chr20 13124796 13124899 -53543106 + CT-rich Low_complexity Low_complexity 2 108 0 382 299 26 0 chr20 13124961 13125078 -53542927 - MER113 DNA MER1_type? -6 515 396 358 269 88 69 chr20 13125099 13125259 -53542746 - HAL1 LINE L1 -30 2477 2315 1472 277 87 28 chr20 13125319 13125849 -53542156 + MLT1F1 LTR MaLR 5 565 -2 300 260 71 25 chr20 13125865 13126061 -53541944 - HAL1 LINE L1 -302 2205 2001 2947 177 36 2 chr20 13126102 13126627 -53541378 + MER44D DNA MER2_type 2 599 -6 509 265 90 30 chr20 13126709 13126977 -53541028 - HAL1 LINE L1 -596 1911 1628 195 288 85 0 chr20 13127108 13127167 -53540838 + L2 LINE L2 3215 3278 -35 202 343 0 0 chr20 13127550 13127620 -53540385 + MIR3 SINE MIR 85 154 -54 1461 233 15 56 chr20 13128035 13128083 -53539922 + MLT1A2 LTR MaLR 1 49 -325 2524 140 44 0 chr20 13128083 13128491 -53539514 + MSTC LTR MaLR 3 428 0 1461 233 15 56 chr20 13128491 13128832 -53539173 + MLT1A2 LTR MaLR 49 374 0 382 349 91 0 chr20 13129282 13129491 -53538514 - MLT1H LTR MaLR -233 316 89 203 61 30 0 chr20 13129692 13129725 -53538280 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1649 153 69 0 chr20 13129745 13130007 -53537998 - AluSx SINE Alu -32 280 1 2092 164 32 57 chr20 13130146 13130616 -53537389 + MLT1C LTR MaLR 1 458 -9 6502 155 14 4 chr20 13131165 13132258 -53535747 - L1PA11 LINE L1 -1752 4394 3291 6143 104 15 0 chr20 13132260 13134006 -53533999 + L1PA11 LINE L1 4408 6174 0 9039 229 27 8 chr20 13134461 13137669 -53530336 + L1PA13 LINE L1 1229 4506 -2291 961 272 48 36 chr20 13137757 13138066 -53529939 + MLT1G LTR MaLR 251 563 -27 32 26 0 0 chr20 13138113 13138152 -53529853 + AT_rich Low_complexity Low_complexity 1 39 0 234 81 0 0 chr20 13138646 13138683 -53529322 + (A)n Simple_repeat Simple_repeat 1 37 0 14325 169 45 24 chr20 13138937 13141704 -53526301 + L1MA4A LINE L1 3411 6309 -1413 2194 58 0 0 chr20 13141704 13141980 -53526025 - L1PA5 LINE L1 0 6154 5879 14325 169 45 24 chr20 13141980 13143424 -53524581 + L1MA4A LINE L1 6309 7722 0 697 291 109 24 chr20 13143540 13143787 -53524218 - MLT1K LTR MaLR -158 430 163 5035 119 71 11 chr20 13143851 13145117 -53522888 + L1PB1 LINE L1 4833 6150 -1 237 317 48 59 chr20 13145208 13145394 -53522611 + L3 LINE CR1 1207 1390 -187 2340 98 0 3 chr20 13146538 13146845 -53521160 + AluSg SINE Alu 1 306 -4 4207 192 54 4 chr20 13147130 13148193 -53519812 - L1MB8 LINE L1 -5 6173 5060 474 227 77 66 chr20 13148481 13148789 -53519216 - MLT1H LTR MaLR -198 351 1 1643 195 0 34 chr20 13149030 13149328 -53518677 + AluJb SINE Alu 3 290 -22 42039 35 27 1 chr20 13149760 13155749 -53512256 + L1PA3 LINE L1 8 6155 0 1135 292 95 28 chr20 13156485 13157139 -53510866 - L1ME3A LINE L1 -11 6159 5462 1171 302 48 16 chr20 13157148 13157813 -53510192 - L1ME3A LINE L1 -874 5272 4587 573 100 0 0 chr20 13157871 13157951 -53510054 - THE1C LTR MaLR -54 321 242 609 278 80 67 chr20 13157970 13158481 -53509524 - L1ME3A LINE L1 -1564 4582 4065 872 39 0 0 chr20 13158547 13158649 -53509356 + AluY SINE Alu 192 293 -18 544 236 24 77 chr20 13158649 13158857 -53509148 - L1ME3A LINE L1 -2158 3988 3792 3293 180 39 13 chr20 13159054 13159748 -53508257 - L1MB1 LINE L1 -164 6004 5293 198 0 0 0 chr20 13159800 13159822 -53508183 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 6809 201 50 7 chr20 13159824 13161418 -53506587 - L1MB1 LINE L1 -853 5293 3632 2629 223 77 5 chr20 13161426 13162207 -53505798 - L1MB1 LINE L1 -2865 3281 2445 445 332 76 16 chr20 13162220 13162470 -53505535 - L1ME3A LINE L1 -2410 3736 3472 24 0 0 0 chr20 13163342 13163366 -53504639 + AT_rich Low_complexity Low_complexity 1 24 0 1620 104 29 4 chr20 13165172 13165412 -53502593 - MER51A LTR ERV1 0 634 389 543 113 0 153 chr20 13165382 13165506 -53502499 - MER51B LTR ERV1 -272 105 1 * 1443 241 24 73 chr20 13165562 13166068 -53501937 + MLT1E3 LTR MaLR 139 619 -5 390 250 0 75 chr20 13166086 13166206 -53501799 - MER5B DNA MER1_type -67 111 1 497 267 59 30 chr20 13166279 13166414 -53501591 - L2 LINE L2 0 3272 3134 216 318 178 31 chr20 13166969 13167098 -53500907 + MER5B DNA MER1_type 17 164 -14 * 222 294 12 24 chr20 13167093 13167178 -53500827 - L2 LINE L2 -351 2963 2880 279 71 0 0 chr20 13167445 13167487 -53500518 + (A)n Simple_repeat Simple_repeat 1 42 0 748 321 84 24 chr20 13167813 13168264 -53499741 + L2 LINE L2 2832 3309 -4 1659 161 120 79 chr20 13168290 13168831 -53499174 - LTR49 LTR ERV1 -23 599 2 2595 55 0 0 chr20 13169591 13169902 -53498103 - AluY SINE Alu 0 311 1 578 293 5 0 chr20 13169904 13170092 -53497913 - MER5A DNA MER1_type 0 189 1 7705 215 51 58 chr20 13170568 13170750 -53497255 - L1MB1 LINE L1 0 6168 5986 1653 138 85 28 chr20 13170750 13171104 -53496901 + THE1C LTR MaLR 1 374 -1 7705 215 51 58 chr20 13171104 13173312 -53494693 - L1MB1 LINE L1 -182 5986 3766 772 163 0 35 chr20 13173312 13173453 -53494552 - AluJo SINE Alu -176 136 1 7705 215 51 58 chr20 13173453 13173717 -53494288 - L1MB1 LINE L1 -2402 3766 3502 2538 83 43 92 chr20 13173717 13174184 -53493821 - MLT2A1 LTR ERVL 0 444 1 7705 215 51 58 chr20 13174184 13175328 -53492677 - L1MB1 LINE L1 -2666 3502 2276 520 224 22 0 chr20 13175316 13175472 -53492533 + L1MB1 LINE L1 2360 2519 -3863 * 411 313 78 61 chr20 13175575 13176034 -53491971 - L1MC4a LINE L1 -222 5948 5601 229 248 51 117 chr20 13176285 13176422 -53491583 + MLT1G1 LTR MaLR 284 411 -138 275 164 55 0 chr20 13176430 13176485 -53491520 + MLT1G1 LTR MaLR 522 579 -16 430 262 105 24 chr20 13176516 13176726 -53491279 - L1MC4a LINE L1 -580 5590 5364 23 33 0 0 chr20 13177250 13177280 -53490725 + AT_rich Low_complexity Low_complexity 1 30 0 498 311 44 17 chr20 13177919 13178099 -53489906 - MIR SINE MIR -3 259 75 1262 247 60 73 chr20 13178180 13178629 -53489376 + LTR16A1 LTR ERVL 15 457 0 1276 213 118 0 chr20 13178950 13179222 -53488783 + AluJo SINE Alu 5 308 -4 2099 117 18 9 chr20 13179751 13180085 -53487920 - L1PA16 LINE L1 0 6166 5830 472 251 33 107 chr20 13180863 13181106 -53486899 - MLT1H LTR MaLR -146 403 179 1845 149 0 4 chr20 13182538 13182806 -53485199 - AluSx SINE Alu -45 267 1 397 256 23 23 chr20 13183167 13183300 -53484705 - MLT1H LTR MaLR -388 161 29 233 286 29 0 chr20 13183482 13183552 -53484453 + CT-rich Low_complexity Low_complexity 4 75 0 368 260 31 0 chr20 13183583 13183679 -53484326 - L2 LINE L2 -9 3304 3206 546 284 167 18 chr20 13184766 13185048 -53482957 - L2 LINE L2 0 3313 2990 475 296 50 17 chr20 13185147 13185326 -53482679 + LTR16A1 LTR ERVL 168 352 -105 239 232 0 18 chr20 13185387 13185443 -53482562 + LTR16C LTR ERVL 426 480 -11 2223 116 3 0 chr20 13185490 13185792 -53482213 + AluSx SINE Alu 3 305 -7 297 355 36 14 chr20 13185884 13186022 -53481983 + MIR3 SINE MIR 50 190 -18 22 56 0 0 chr20 13186470 13186506 -53481499 + AT_rich Low_complexity Low_complexity 1 36 0 1844 116 18 60 chr20 13186516 13186851 -53481154 - L1MA5A LINE L1 -5 6292 5972 349 237 75 43 chr20 13187169 13187262 -53480743 + MIR SINE MIR 49 144 -118 526 253 50 56 chr20 13188096 13188444 -53479561 - LTR16A1 LTR ERVL -1 456 16 260 331 14 40 chr20 13188833 13188981 -53479024 + MIR SINE MIR 57 200 -62 2241 115 0 0 chr20 13189013 13189317 -53478688 - AluSq SINE Alu -5 308 5 707 241 29 6 chr20 13191262 13191432 -53476573 - LTR16C LTR ERVL 0 491 318 3063 116 39 77 chr20 13191905 13192438 -53475567 + LTR64 LTR ERVK 1 513 0 325 240 115 39 chr20 13193995 13194203 -53473802 - MER115 DNA AcHobo -242 451 228 1974 210 43 51 chr20 13194223 13194732 -53473273 + MLT1D LTR MaLR 1 505 0 906 229 33 0 chr20 13196027 13196210 -53471795 + MER5A DNA MER1_type 1 189 0 213 154 0 58 chr20 13196375 13196427 -53471578 + A-rich Low_complexity Low_complexity 2 50 0 264 333 36 22 chr20 13196758 13196896 -53471109 + MLT1K LTR MaLR 199 338 -250 2121 239 65 8 chr20 13197069 13197591 -53470414 - L1ME1 LINE L1 -69 6097 5546 551 40 0 13 chr20 13197996 13198071 -53469934 + (TAGA)n Simple_repeat Simple_repeat 1 74 0 252 0 0 0 chr20 13198950 13198978 -53469027 + (TG)n Simple_repeat Simple_repeat 2 29 0 414 252 43 22 chr20 13199395 13199534 -53468471 + LTR16C LTR ERVL 335 476 -15 428 298 49 72 chr20 13201843 13202148 -53465857 - L2 LINE L2 0 3313 3016 734 236 38 45 chr20 13202148 13202401 -53465604 + MLT1G1 LTR MaLR 1 297 -298 598 284 59 75 chr20 13203312 13203763 -53464242 + MLT1L LTR MaLR 16 405 -106 1093 317 54 39 chr20 13203877 13204394 -53463611 - MER115 DNA AcHobo 0 693 169 368 247 129 0 chr20 13204697 13204790 -53463215 + MER69 DNA AcHobo 1 105 -1121 1704 241 99 60 chr20 13204938 13205447 -53462558 + L1MB2 LINE L1 5550 6087 -84 1729 160 0 57 chr20 13205447 13205778 -53462227 - AluJo SINE Alu 0 312 1 1704 241 99 60 chr20 13205778 13205865 -53462140 + L1MB2 LINE L1 6087 6169 -2 883 311 119 7 chr20 13206485 13206913 -53461092 - LTR16C LTR ERVL -10 481 6 1833 191 57 40 chr20 13206969 13207424 -53460581 - MLT1C LTR MaLR -4 463 1 2857 10 0 0 chr20 13207711 13208021 -53459984 + AluYa5 SINE Alu 1 310 -1 409 303 0 106 chr20 13208558 13208766 -53459239 - MER5A DNA MER1_type -2 187 2 707 219 7 19 chr20 13208772 13208927 -53459078 + MER5A DNA MER1_type 4 156 -33 311 193 92 73 chr20 13209377 13209486 -53458519 - L1ME4a LINE L1 -27 6094 5984 217 169 15 31 chr20 13209553 13209618 -53458387 + (CATATA)n Simple_repeat Simple_repeat 2 65 0 198 0 0 0 chr20 13210318 13210340 -53457665 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 2079 132 0 0 chr20 13212073 13212362 -53455643 + AluSx SINE Alu 1 289 -23 424 269 98 93 chr20 13212399 13212797 -53455208 - MLT1J LTR MaLR -2 509 110 569 279 146 0 chr20 13212952 13213117 -53454888 + MER5A DNA MER1_type 1 189 0 4735 222 46 97 chr20 13213127 13214977 -53453028 + MER52A LTR ERV1 1 1755 0 370 212 227 23 chr20 13215128 13215260 -53452745 - MER5A DNA MER1_type -5 184 26 917 199 0 23 chr20 13215274 13215450 -53452555 + MER5A DNA MER1_type 15 186 -3 1681 189 81 35 chr20 13215537 13215908 -53452097 - MLT1B LTR MaLR 0 390 3 441 210 8 0 chr20 13215910 13216005 -53452000 - MER5A DNA MER1_type -93 96 1 226 382 0 32 chr20 13216245 13216368 -53451637 + L3 LINE CR1 729 847 -730 701 253 18 29 chr20 13216694 13216759 -53451246 + MER5B DNA MER1_type 10 74 -104 1544 200 72 88 chr20 13216759 13217188 -53450817 - MLT1C LTR MaLR 0 467 45 1336 186 115 11 chr20 13217188 13217467 -53450538 - AluSg SINE Alu -2 308 1 1544 200 72 88 chr20 13217467 13217512 -53450493 - MLT1C LTR MaLR -422 45 1 701 253 18 29 chr20 13217512 13217616 -53450389 + MER5B DNA MER1_type 74 177 -1 654 204 70 35 chr20 13217777 13217949 -53450056 - MER5B DNA MER1_type 0 178 1 566 312 75 35 chr20 13218122 13218520 -53449485 + L2 LINE L2 1686 2099 -1215 340 175 38 38 chr20 13218544 13218624 -53449381 - MER116 DNA Mariner 0 80 1 274 362 57 7 chr20 13218964 13219105 -53448900 + L2 LINE L2 2213 2360 -954 324 253 19 13 chr20 13219137 13219338 -53448667 + MLT1F LTR MaLR 20 211 -319 316 230 36 86 chr20 13219399 13219486 -53448519 + MLT1G LTR MaLR 457 536 -54 1889 199 64 89 chr20 13219486 13220050 -53447955 - MLT2B3 LTR ERVL -1 553 4 316 230 36 86 chr20 13220050 13220101 -53447904 + MLT1G LTR MaLR 536 588 -2 515 259 76 16 chr20 13220353 13220538 -53447467 - MER117 DNA MER1_type 0 197 2 1326 234 108 18 chr20 13220745 13221133 -53446872 + MLT1H LTR MaLR 6 428 -121 216 0 0 0 chr20 13221882 13221906 -53446099 + (T)n Simple_repeat Simple_repeat 1 24 0 455 253 143 55 chr20 13222171 13222607 -53445398 + MLT1H LTR MaLR 72 592 -3 24 0 0 0 chr20 13223508 13223532 -53444473 + AT_rich Low_complexity Low_complexity 1 24 0 662 239 165 71 chr20 13225262 13225347 -53442658 - L2 LINE L2 -1 3312 3236 2298 88 7 0 chr20 13225347 13225641 -53442364 + AluSq SINE Alu 1 296 -17 662 239 165 71 chr20 13225641 13225919 -53442086 - L2 LINE L2 -77 3236 2915 1579 222 162 40 chr20 13225924 13226450 -53441555 + MLT1G1 LTR MaLR 6 595 0 346 256 181 15 chr20 13226450 13226583 -53441422 - L2 LINE L2 -417 2897 2743 331 310 121 0 chr20 13227865 13227981 -53440024 - MIR3 SINE MIR -9 199 70 195 292 83 0 chr20 13228146 13228218 -53439787 + L2 LINE L2 3168 3245 -27 325 242 132 0 chr20 13228328 13228419 -53439586 - L2 LINE L2 -21 3292 3190 2220 89 0 3 chr20 13228850 13229155 -53438850 - AluSg1 SINE Alu 0 304 1 1249 227 163 62 chr20 13229748 13230246 -53437759 + MLT1H LTR MaLR 2 549 0 390 279 76 44 chr20 13230251 13230409 -53437596 - MER5B DNA MER1_type -11 167 5 497 283 35 0 chr20 13230941 13231086 -53436919 + LTR16A1 LTR ERVL 4 153 -304 6577 136 70 10 chr20 13231089 13232234 -53435771 - Tigger3b DNA MER2_type 0 1231 1 781 247 124 25 chr20 13232234 13232517 -53435488 + LTR16A1 LTR ERVL 145 455 -2 1059 124 0 0 chr20 13233949 13234126 -53433879 + (GGGGA)n Simple_repeat Simple_repeat 3 179 0 597 158 0 0 chr20 13234129 13234249 -53433756 + G-rich Low_complexity Low_complexity 3 122 0 1462 189 0 63 chr20 13234289 13234607 -53433398 + AluJb SINE Alu 1 298 -14 2101 167 182 55 chr20 13235622 13235761 -53432244 + LTR49 LTR ERV1 1 121 -474 2109 129 3 0 chr20 13235761 13236055 -53431950 + AluSx SINE Alu 1 295 -17 2101 167 182 55 chr20 13236055 13236443 -53431562 + LTR49 LTR ERV1 121 595 0 6326 93 29 8 chr20 13236746 13237775 -53430230 + L1PA13 LINE L1 5106 6163 0 26 50 0 0 chr20 13237775 13237815 -53430190 + AT_rich Low_complexity Low_complexity 1 40 0 632 253 67 6 chr20 13237888 13238066 -53429939 + MER5A DNA MER1_type 1 189 0 21 0 0 0 chr20 13238346 13238367 -53429638 + AT_rich Low_complexity Low_complexity 1 21 0 2280 94 0 7 chr20 13239227 13239535 -53428470 - AluSx SINE Alu -6 306 1 541 272 17 13 chr20 13239759 13239939 -53428066 + MIR SINE MIR 35 214 -48 1526 196 34 7 chr20 13239963 13240254 -53427751 + AluJb SINE Alu 4 302 -10 266 336 29 10 chr20 13240378 13240482 -53427523 + MIR3 SINE MIR 91 196 -12 280 223 26 4 chr20 13240658 13240743 -53427262 - L1ME3A LINE L1 -47 6115 6026 1535 200 40 7 chr20 13240846 13240968 -53427037 + AluJb SINE Alu 1 117 -195 252 0 0 0 chr20 13240968 13240996 -53427009 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1535 200 40 7 chr20 13240996 13241173 -53426832 + AluJb SINE Alu 117 310 -2 22 0 0 0 chr20 13242303 13242325 -53425680 + AT_rich Low_complexity Low_complexity 1 22 0 2120 124 3 13 chr20 13242699 13243014 -53424991 + AluSx SINE Alu 1 312 0 2242 110 7 0 chr20 13243929 13244228 -53423777 - AluSc SINE Alu -8 301 1 420 181 165 16 chr20 13244253 13244380 -53423625 + MER5A DNA MER1_type 7 152 -37 543 223 172 6 chr20 13244876 13245033 -53422972 + MER5A DNA MER1_type 4 186 -3 387 269 187 8 chr20 13245046 13245180 -53422825 - MER5B DNA MER1_type -2 176 19 1545 178 68 105 chr20 13245331 13245741 -53422264 - MSTD LTR MaLR 0 396 2 204 328 95 26 chr20 13245743 13245859 -53422146 - MIR SINE MIR -118 144 21 502 249 54 60 chr20 13246331 13246516 -53421489 + MIR SINE MIR 40 223 -39 546 281 27 14 chr20 13246718 13246864 -53421141 + L2 LINE L2 3124 3271 -1 742 272 163 0 chr20 13247012 13247288 -53420717 + MLT1L LTR MaLR 294 614 -1 304 301 112 0 chr20 13247427 13247570 -53420435 - MIR SINE MIR -58 204 46 829 243 11 11 chr20 13250824 13251013 -53416992 + MER5A DNA MER1_type 1 189 0 250 279 77 10 chr20 13251019 13251123 -53416882 + MIR SINE MIR 23 133 -75 470 244 127 141 chr20 13251123 13251490 -53416515 - MLT1H1 LTR MaLR 0 555 195 1232 162 209 50 chr20 13251490 13251749 -53416256 - AluJo SINE Alu -2 300 1 470 244 127 141 chr20 13251749 13251876 -53416129 - MLT1H1 LTR MaLR -360 195 68 298 267 40 0 chr20 13251928 13252003 -53416002 + MIR3 SINE MIR 129 206 -2 246 105 0 0 chr20 13252248 13252286 -53415719 + (ATG)n Simple_repeat Simple_repeat 2 39 0 207 0 0 0 chr20 13252471 13252494 -53415511 + (T)n Simple_repeat Simple_repeat 1 23 0 2393 92 0 0 chr20 13252537 13252840 -53415165 - AluSg SINE Alu -7 303 1 529 290 90 28 chr20 13252880 13253135 -53414870 + MLT1J2 LTR MaLR 180 450 0 250 278 67 0 chr20 13253321 13253411 -53414594 - L2 LINE L2 0 3272 3177 805 85 25 0 chr20 13253517 13253635 -53414370 + BC200 scRNA scRNA 36 156 -44 284 323 46 39 chr20 13253637 13253767 -53414238 - L2 LINE L2 -222 3050 2920 209 184 0 41 chr20 13254550 13254599 -53413406 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 244 297 98 108 chr20 13254612 13254884 -53413121 - L2 LINE L2 -660 2654 2381 2164 130 0 3 chr20 13254884 13255191 -53412814 + AluSx SINE Alu 1 306 -6 244 297 98 108 chr20 13255191 13255527 -53412478 - L2 LINE L2 -933 2381 2052 800 281 164 62 chr20 13255741 13256222 -53411783 - MLT1K LTR MaLR -14 574 45 215 276 0 0 chr20 13256499 13256527 -53411478 + A-rich Low_complexity Low_complexity 5 32 -30 2566 45 7 3 chr20 13256527 13256837 -53411168 + AluY SINE Alu 1 311 0 215 276 0 0 chr20 13256837 13256866 -53411139 + A-rich Low_complexity Low_complexity 31 62 0 189 74 0 0 chr20 13259165 13259192 -53408813 + (T)n Simple_repeat Simple_repeat 1 27 0 2088 120 0 3 chr20 13259719 13260003 -53408002 - AluSq SINE Alu -24 289 7 224 301 45 83 chr20 13261078 13261211 -53406794 - L2 LINE L2 0 3313 3186 324 0 0 0 chr20 13261795 13261831 -53406174 + (TG)n Simple_repeat Simple_repeat 2 37 0 2130 134 3 10 chr20 13263861 13264175 -53403830 - AluSx SINE Alu 0 312 1 1809 212 51 27 chr20 13264911 13265438 -53402567 + L1ME2 LINE L1 5593 6162 0 1129 290 77 5 chr20 13266816 13267195 -53400810 + LTR16C LTR ERVL 80 485 -6 231 336 8 48 chr20 13267930 13268055 -53399950 + MIR3 SINE MIR 68 187 -21 198 91 0 0 chr20 13268098 13268131 -53399874 + (A)n Simple_repeat Simple_repeat 1 33 0 2500 34 14 0 chr20 13268629 13268921 -53399084 + AluY SINE Alu 2 297 -14 21 0 0 0 chr20 13269271 13269292 -53398713 + AT_rich Low_complexity Low_complexity 1 21 0 415 188 0 0 chr20 13269292 13269361 -53398644 - Tigger5 DNA MER2_type 0 2323 2255 375 235 0 24 chr20 13269351 13269436 -53398569 + Tigger5 DNA MER2_type 2238 2320 -3 * 490 182 0 0 chr20 13269436 13269512 -53398493 - Tigger5 DNA MER2_type -2245 78 3 630 293 162 37 chr20 13269543 13269832 -53398173 - L1M4 LINE L1 -1071 5075 4824 1377 218 158 48 chr20 13269832 13270287 -53397718 + MLT1D LTR MaLR 1 505 0 630 293 162 37 chr20 13270287 13270676 -53397329 - L1M4 LINE L1 -1322 4824 4312 234 309 120 43 chr20 13270788 13272200 -53395805 - L1M4 LINE L1 -1956 4190 2671 323 279 90 49 chr20 13272472 13272716 -53395289 - L1M4 LINE L1 -3762 2384 2131 264 307 47 73 chr20 13273537 13273636 -53394369 - MIR SINE MIR -57 205 105 2345 127 19 35 chr20 13273636 13274005 -53394000 - THE1B LTR MaLR -1 363 1 12321 94 13 1 chr20 13274005 13275567 -53392438 - THE1B-int LTR MaLR 0 1580 1 1923 118 109 35 chr20 13275567 13275782 -53392223 - THE1B LTR MaLR 0 364 114 2726 45 0 0 chr20 13275782 13276092 -53391913 + AluY SINE Alu 1 310 -1 1923 118 109 35 chr20 13276092 13276215 -53391790 - THE1B LTR MaLR -250 114 1 264 307 47 73 chr20 13276215 13276263 -53391742 - MIR SINE MIR -154 108 60 783 214 32 32 chr20 13276916 13277103 -53390902 - MER5A DNA MER1_type -2 187 1 242 391 36 0 chr20 13278211 13278321 -53389684 + L2 LINE L2 3143 3256 -16 363 332 73 2 chr20 13278460 13278661 -53389344 - MIR SINE MIR -45 217 6 198 366 57 24 chr20 13278844 13278967 -53389038 - L2 LINE L2 -5 3267 3141 21 0 0 0 chr20 13279267 13279288 -53388717 + AT_rich Low_complexity Low_complexity 1 21 0 1468 218 133 3 chr20 13279482 13279867 -53388138 - MER63B DNA MER1_type 0 436 2 613 65 13 0 chr20 13279887 13279964 -53388041 + MADE1 DNA Mariner 3 80 0 830 244 19 38 chr20 13280523 13280736 -53387269 + MER3 DNA MER1_type 1 209 0 273 98 0 0 chr20 13281749 13281790 -53386215 + (T)n Simple_repeat Simple_repeat 1 41 0 1316 213 47 3 chr20 13281833 13282129 -53385876 - L1ME1 LINE L1 -5 6161 5853 254 325 12 119 chr20 13282810 13282970 -53385035 + MIR3 SINE MIR 63 205 -3 798 168 0 36 chr20 13283759 13283896 -53384109 - FLAM_A SINE Alu -1 132 1 350 148 89 59 chr20 13284095 13284196 -53383809 - MER67C LTR ERV1 0 710 607 2384 190 37 91 chr20 13284294 13284935 -53383070 - MER67C LTR ERV1 -103 607 1 411 289 37 16 chr20 13285138 13285297 -53382708 + MER5B DNA MER1_type 25 177 -1 499 349 17 0 chr20 13285338 13285510 -53382495 + MER5B DNA MER1_type 1 175 -3 2086 94 17 30 chr20 13285531 13285830 -53382175 + AluY SINE Alu 1 295 -16 192 345 108 16 chr20 13285859 13286053 -53381952 + MIR SINE MIR 51 262 0 180 0 0 0 chr20 13286288 13286308 -53381697 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 779 233 16 26 chr20 13286441 13286630 -53381375 - MER5A DNA MER1_type -2 187 1 622 201 189 13 chr20 13287485 13287644 -53380361 + MER53 DNA DNA 2 188 -1 536 221 18 61 chr20 13288011 13288174 -53379831 - MER5B DNA MER1_type -21 157 2 267 323 52 0 chr20 13288239 13288335 -53379670 - MER5A DNA MER1_type -80 109 9 270 0 0 0 chr20 13289789 13289819 -53378186 + (CA)n Simple_repeat Simple_repeat 2 31 0 311 282 161 55 chr20 13290113 13290368 -53377637 + MLT1H LTR MaLR 218 499 -50 405 348 0 18 chr20 13291256 13291420 -53376585 + MER5B DNA MER1_type 17 177 -1 405 290 21 21 chr20 13292470 13292615 -53375390 - L1ME4a LINE L1 -204 5917 5773 388 260 39 16 chr20 13292687 13292814 -53375191 - L1ME4a LINE L1 -459 5662 5533 1400 232 13 53 chr20 13292959 13293334 -53374671 - LTR16C LTR ERVL 0 491 132 893 231 29 25 chr20 13293600 13293842 -53374163 + L1MEc LINE L1 37 279 -6117 2080 234 79 53 chr20 13293864 13294375 -53373630 + L1MEc LINE L1 336 832 -5564 2095 130 7 3 chr20 13294375 13294682 -53373323 + AluSx SINE Alu 1 308 -4 2080 234 79 53 chr20 13294682 13294857 -53373148 + L1MEc LINE L1 832 1001 -5395 1520 163 38 55 chr20 13294857 13295322 -53372683 + AluJo SINE Alu 1 460 0 2080 234 79 53 chr20 13295322 13295415 -53372590 + L1MEc LINE L1 1001 1090 -5306 2289 101 0 25 chr20 13295415 13295731 -53372274 + AluSg SINE Alu 2 309 -1 2080 234 79 53 chr20 13295731 13295772 -53372233 + L1MEc LINE L1 1090 1180 -5216 636 209 30 58 chr20 13295773 13296011 -53371994 - L1ME4a LINE L1 -753 5393 5159 549 80 0 0 chr20 13296673 13296748 -53371257 + (CA)n Simple_repeat Simple_repeat 2 76 0 383 299 61 0 chr20 13296846 13296993 -53371012 - MIR3 SINE MIR -32 176 21 271 302 0 0 chr20 13297365 13297451 -53370554 + MIR SINE MIR 107 192 -70 2073 142 0 3 chr20 13297452 13297761 -53370244 + AluSx SINE Alu 1 308 -4 640 175 0 29 chr20 13297761 13297932 -53370073 + GA-rich Low_complexity Low_complexity 1 166 0 1737 171 0 21 chr20 13298182 13298506 -53369499 + AluJb SINE Alu 1 318 0 22 35 0 0 chr20 13301121 13301150 -53366855 + AT_rich Low_complexity Low_complexity 1 29 0 409 281 84 53 chr20 13301269 13301628 -53366377 + L1MB4 LINE L1 5629 5998 -182 * 1754 223 98 9 chr20 13301316 13301765 -53366240 + L1ME3A LINE L1 5677 6165 -5 367 279 0 25 chr20 13301795 13301917 -53366088 + L1MB8 LINE L1 6036 6154 -24 565 323 50 56 chr20 13302381 13302437 -53365568 - MLT1H LTR MaLR -197 352 297 2059 244 104 2 chr20 13302437 13302929 -53365076 + MLT1F LTR MaLR 1 542 0 565 323 50 56 chr20 13302929 13303175 -53364830 - MLT1H LTR MaLR -252 297 52 1681 207 134 47 chr20 13303176 13303279 -53364726 + MLT1F1 LTR MaLR 3 96 -471 2046 110 0 72 chr20 13303279 13303597 -53364408 - AluSc SINE Alu -14 295 1 1681 207 134 47 chr20 13303597 13304006 -53363999 + MLT1F1 LTR MaLR 96 560 -7 764 319 42 25 chr20 13304054 13304556 -53363449 - LTR67 LTR ERVL -6 551 3 419 292 22 15 chr20 13304655 13304792 -53363213 + MER117 DNA MER1_type 11 148 -49 263 301 216 7 chr20 13305646 13305799 -53362206 - MER5A DNA MER1_type 0 189 5 486 303 25 25 chr20 13305973 13306171 -53361834 - L2 LINE L2 0 3313 3116 2090 149 35 101 chr20 13307614 13307694 -53360311 - Tigger2a DNA MER2_type -2274 434 350 1822 158 3 3 chr20 13307694 13307992 -53360013 - AluJo SINE Alu -6 306 9 2090 149 35 101 chr20 13307992 13308108 -53359897 - Tigger2a DNA MER2_type -2358 350 228 194 0 39 0 chr20 13308108 13308134 -53359871 + (TA)n Simple_repeat Simple_repeat 1 27 0 2090 149 35 101 chr20 13308134 13308393 -53359612 - Tigger2a DNA MER2_type -2480 228 8 280 331 24 0 chr20 13310093 13310217 -53357788 + MER5B DNA MER1_type 4 130 -48 243 222 0 0 chr20 13310256 13310310 -53357695 + MER5B DNA MER1_type 125 178 0 * 890 268 28 24 chr20 13310310 13310558 -53357447 + MIR SINE MIR 9 257 -5 209 234 16 0 chr20 13310571 13310635 -53357370 + L2 LINE L2 2905 2969 -303 181 220 0 51 chr20 13310727 13310786 -53357219 + L2 LINE L2 3162 3217 -96 1544 177 7 11 chr20 13311789 13312066 -53355939 - AluJb SINE Alu 0 312 37 389 259 184 0 chr20 13312740 13312898 -53355107 - MER5A DNA MER1_type 0 189 3 290 248 178 0 chr20 13313973 13314074 -53353931 + MIR SINE MIR 95 213 -49 378 205 126 24 chr20 13314209 13314336 -53353669 - MER5A DNA MER1_type -10 179 40 194 267 168 46 chr20 13314690 13314821 -53353184 - L3 LINE CR1 -137 1440 1294 574 290 25 15 chr20 13314878 13315078 -53352927 + MIR SINE MIR 6 207 -55 21 36 0 0 chr20 13315532 13315560 -53352445 + AT_rich Low_complexity Low_complexity 1 28 0 1410 253 85 37 chr20 13315601 13316118 -53351887 + MLT1H LTR MaLR 6 547 -2 219 69 0 0 chr20 13316145 13316174 -53351831 + (CAA)n Simple_repeat Simple_repeat 2 30 0 307 216 27 0 chr20 13316207 13316281 -53351724 + MER116 DNA Mariner 2 77 -3 437 231 107 0 chr20 13316283 13316404 -53351601 - MIR SINE MIR -15 247 114 416 286 103 11 chr20 13316564 13316749 -53351256 - MIR SINE MIR -26 236 35 1749 158 30 82 chr20 13316970 13317337 -53350668 - MER7A DNA MER2_type 0 346 1 419 264 112 35 chr20 13317598 13317795 -53350210 - Charlie8 DNA MER1_type -2118 299 88 322 194 209 50 chr20 13317886 13318025 -53349980 + MER5A DNA MER1_type 1 161 -28 418 179 60 152 chr20 13319208 13319392 -53348613 - MLT1H LTR MaLR -2 547 381 801 256 72 9 chr20 13319606 13319829 -53348176 + LTR16A1 LTR ERVL 199 435 -22 257 262 13 31 chr20 13319938 13320170 -53347835 + CT-rich Low_complexity Low_complexity 1 227 0 190 315 109 11 chr20 13320983 13321075 -53346930 + MIR SINE MIR 25 125 -83 1894 255 69 6 chr20 13321077 13321587 -53346418 + MLT1H LTR MaLR 8 549 0 838 239 5 24 chr20 13321692 13321901 -53346104 - MER3 DNA MER1_type -4 205 1 376 325 75 16 chr20 13322676 13322864 -53345141 + MIR SINE MIR 45 243 -19 750 281 48 12 chr20 13323090 13323339 -53344666 + LTR16A1 LTR ERVL 199 456 -1 285 348 76 43 chr20 13323554 13323764 -53344241 - MER115 DNA AcHobo -260 433 217 460 284 47 0 chr20 13323765 13323913 -53344092 - MER5A DNA MER1_type -4 185 31 1319 175 98 49 chr20 13324115 13324541 -53343464 - MLT1D LTR MaLR 0 505 22 672 182 117 13 chr20 13325381 13325535 -53342470 + L1ME3A LINE L1 6000 6169 -1 1570 121 26 124 chr20 13325539 13325887 -53342118 + AluYb8 SINE Alu 1 314 -4 231 322 23 11 chr20 13326279 13326366 -53341639 + MLT1J1 LTR MaLR 69 156 -290 294 316 76 25 chr20 13326437 13326595 -53341410 + MLT1J2 LTR MaLR 284 449 -1 205 263 18 0 chr20 13326622 13326679 -53341326 - L2 LINE L2 0 3313 3256 265 321 36 15 chr20 13326745 13326882 -53341123 - MIR SINE MIR -25 237 98 234 237 0 17 chr20 13328068 13328127 -53339878 - L2 LINE L2 -10 3262 3205 303 200 31 0 chr20 13328526 13328591 -53339414 - L2 LINE L2 0 3313 3247 210 71 0 0 chr20 13328647 13328675 -53339330 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 21 0 0 0 chr20 13328704 13328725 -53339280 + AT_rich Low_complexity Low_complexity 1 21 0 1551 255 59 38 chr20 13328730 13329252 -53338753 - MLT1G LTR MaLR -1 589 57 200 408 41 0 chr20 13329289 13329436 -53338569 - L2 LINE L2 -254 3059 2907 680 256 79 58 chr20 13330929 13331310 -53336695 - MLT1H LTR MaLR 0 549 118 350 341 38 0 chr20 13332370 13332502 -53335503 + MER91C DNA MER1_type 4 140 0 2229 85 14 3 chr20 13332860 13333153 -53334852 + AluSq SINE Alu 1 296 -17 227 139 0 0 chr20 13333153 13333196 -53334809 + L1MC4 LINE L1 6661 6703 -1339 252 86 0 0 chr20 13333883 13333918 -53334087 + (T)n Simple_repeat Simple_repeat 1 35 0 840 136 15 0 chr20 13333918 13334050 -53333955 - L1PB1 LINE L1 0 6151 6018 306 281 149 45 chr20 13334059 13334301 -53333704 - MLT1K LTR MaLR -2 586 320 2136 229 44 51 chr20 13334366 13334917 -53333088 + MLT1H LTR MaLR 3 549 0 2278 118 7 0 chr20 13335778 13336083 -53331922 + AluSc SINE Alu 1 307 -2 392 327 119 0 chr20 13336716 13336884 -53331121 + MLT1H LTR MaLR 130 317 -232 2061 226 61 42 chr20 13336980 13337503 -53330502 - MLT1F LTR MaLR 0 542 10 264 186 0 17 chr20 13338459 13338518 -53329487 + MLT1H LTR MaLR 492 549 0 755 287 116 68 chr20 13339199 13339666 -53328339 - L2 LINE L2 -607 2707 2219 943 251 181 25 chr20 13339670 13340140 -53327865 - MLT1G LTR MaLR -33 557 15 210 260 20 0 chr20 13340154 13340204 -53327801 + L2 LINE L2 3172 3222 -91 385 111 0 28 chr20 13340214 13340286 -53327719 - MLT2B2 LTR ERVL 0 515 446 1345 196 31 42 chr20 13340297 13340583 -53327422 + AluJo SINE Alu 12 294 -18 2632 167 13 4 chr20 13340588 13341044 -53326961 - MLT2B2 LTR ERVL -55 460 1 347 271 45 38 chr20 13341092 13341225 -53326780 - L2 LINE L2 -1100 2214 2081 931 282 41 44 chr20 13341263 13341718 -53326287 + MER115 DNA AcHobo 119 606 -87 398 228 49 0 chr20 13341717 13341840 -53326165 + Zaphod DNA AcHobo 3900 4028 -3 * 502 15 15 15 chr20 13344036 13344104 -53323901 + (TC)n Simple_repeat Simple_repeat 2 69 0 1587 206 93 35 chr20 13344156 13344587 -53323418 + MSTB2 LTR MaLR 2 457 0 1761 189 19 22 chr20 13345460 13345826 -53322179 + MLT1A1 LTR MaLR 1 365 0 925 240 48 56 chr20 13347045 13347420 -53320585 + MLT1H LTR MaLR 1 372 -177 183 279 0 0 chr20 13348334 13348377 -53319628 + MER5B DNA MER1_type 67 109 -69 729 260 62 21 chr20 13349262 13349504 -53318501 - MIR SINE MIR -5 257 6 218 353 0 0 chr20 13350236 13350321 -53317684 + L2 LINE L2 3188 3272 0 26 0 0 0 chr20 13356979 13357005 -53311000 + AT_rich Low_complexity Low_complexity 1 26 0 192 77 0 0 chr20 13361055 13361081 -53306924 + (CTG)n Simple_repeat Simple_repeat 1 26 0 241 247 169 0 chr20 13363850 13363939 -53304066 + MER5A DNA MER1_type 9 112 -77 272 272 10 68 chr20 13364404 13364507 -53303498 + MIR SINE MIR 53 149 -59 600 221 104 64 chr20 13364521 13364770 -53303235 + MER112 DNA MER1_type 2 260 0 582 14 0 0 chr20 13364826 13364899 -53303106 - L1PA3 LINE L1 -3 6152 6080 216 235 0 20 chr20 13365456 13365507 -53302498 - L2 LINE L2 -42 3230 3181 357 324 71 24 chr20 13365736 13365906 -53302099 - MIR3 SINE MIR -25 183 6 233 188 149 117 chr20 13366638 13366792 -53301213 + MIR SINE MIR 85 243 -19 1185 154 75 0 chr20 13367778 13367992 -53300013 - MER30 DNA MER1_type 0 230 1 511 240 0 40 chr20 13368236 13368386 -53299619 + MER104 DNA Tc2 37 180 0 266 26 53 0 chr20 13369657 13369695 -53298310 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 1999 105 3 83 chr20 13370170 13370495 -53297510 - AluSq SINE Alu -14 299 1 30 0 0 0 chr20 13370810 13370840 -53297165 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr20 13371115 13371139 -53296866 + AT_rich Low_complexity Low_complexity 1 24 0 2275 113 3 0 chr20 13372897 13373206 -53294799 + AluSx SINE Alu 1 310 -2 180 0 0 0 chr20 13373384 13373404 -53294601 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 3812 165 42 9 chr20 13373980 13374774 -53293231 + Charlie1 DNA MER1_type 1589 2408 -353 317 229 153 0 chr20 13374773 13374917 -53293088 + Charlie1 DNA MER1_type 2596 2761 0 * 1903 144 152 8 chr20 13374981 13375355 -53292650 + MSTA LTR MaLR 1 428 0 2211 91 3 3 chr20 13375561 13375848 -53292157 + AluSq SINE Alu 9 295 -18 3873 156 37 9 chr20 13376405 13377142 -53290863 + Tigger2 DNA MER2_type 1 757 -1961 1062 147 59 0 chr20 13377197 13377401 -53290604 + Tigger2 DNA MER2_type 2462 2677 -41 2348 79 0 13 chr20 13378450 13378754 -53289251 + AluY SINE Alu 1 300 -11 602 162 0 18 chr20 13379781 13379892 -53288113 + L1PA8 LINE L1 6052 6160 -12 195 42 0 0 chr20 13379897 13379921 -53288084 + (GAAAA)n Simple_repeat Simple_repeat 5 28 0 28 86 0 0 chr20 13380037 13380107 -53287898 + AT_rich Low_complexity Low_complexity 1 70 0 199 270 112 22 chr20 13380587 13380676 -53287329 - MIR SINE MIR -30 232 136 2543 268 91 63 chr20 13380808 13381270 -53286735 - L2 LINE L2 0 3313 2865 2056 127 3 22 chr20 13381270 13381584 -53286421 - AluSx SINE Alu -4 308 1 2543 268 91 63 chr20 13381584 13382013 -53285992 - L2 LINE L2 -448 2865 2449 394 46 215 0 chr20 13382013 13382078 -53285927 - MADE1 DNA Mariner -1 79 1 2543 268 91 63 chr20 13382078 13382499 -53285506 - L2 LINE L2 -864 2449 1950 725 272 47 0 chr20 13383395 13383627 -53284378 + HAL1 LINE L1 3 245 -2262 321 235 86 74 chr20 13383650 13383812 -53284193 + HAL1 LINE L1 311 474 -2033 260 209 97 75 chr20 13383988 13384122 -53283883 + HAL1 LINE L1 2354 2490 -17 268 247 62 0 chr20 13385090 13385187 -53282818 + L1ME4a LINE L1 5570 5672 -449 264 268 222 13 chr20 13385288 13385441 -53282564 - MIR SINE MIR -66 196 12 336 299 126 25 chr20 13385494 13385772 -53282233 + L1ME4a LINE L1 5803 6108 -13 21 0 0 0 chr20 13386245 13386266 -53281739 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr20 13386623 13386652 -53281353 + AT_rich Low_complexity Low_complexity 1 29 0 441 184 265 0 chr20 13387439 13387575 -53280430 - MER5B DNA MER1_type 0 178 7 399 290 105 92 chr20 13387895 13388668 -53279337 + L1M2 LINE L1 441 1289 -5560 264 288 105 33 chr20 13389783 13389936 -53278069 + MIR SINE MIR 1 164 -98 1621 184 70 3 chr20 13389938 13390281 -53277724 + MLT2D LTR ERVL 1 366 -48 219 69 0 0 chr20 13390311 13390340 -53277665 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 773 211 223 31 chr20 13390347 13390702 -53277303 + LTR54 LTR ERV1 76 510 0 357 96 0 33 chr20 13390705 13390774 -53277231 + MLT2B1 LTR ERVL 398 520 0 180 286 119 24 chr20 13391401 13391485 -53276520 - L2 LINE L2 -1 3312 3221 1563 225 29 53 chr20 13392384 13392838 -53275167 - LTR47B LTR ERVL 0 443 1 21 0 0 0 chr20 13392902 13392923 -53275082 + AT_rich Low_complexity Low_complexity 1 21 0 1840 160 40 109 chr20 13393112 13393561 -53274444 + MER47B DNA MER2_type 1 418 0 2062 117 6 25 chr20 13393895 13394211 -53273794 - AluSg SINE Alu 0 310 1 7861 78 3 7 chr20 13394458 13396318 -53271687 + L1PA7 LINE L1 4285 6150 -4 1082 170 68 4 chr20 13396403 13396652 -53271353 - MER33 DNA MER1_type -68 256 1 319 149 0 0 chr20 13396660 13396707 -53271298 - MER5B DNA MER1_type -3 175 129 696 115 0 0 chr20 13396709 13396805 -53271200 - AluSp/q SINE Alu -22 291 196 453 264 16 25 chr20 13396813 13396934 -53271071 - MER5B DNA MER1_type -57 121 2 1440 134 88 69 chr20 13397220 13397526 -53270479 - AluJb SINE Alu 0 312 1 341 231 15 0 chr20 13398450 13398515 -53269490 - MLT1H LTR MaLR -199 350 285 * 475 118 0 75 chr20 13398494 13398587 -53269418 + MLT1H LTR MaLR 218 303 -246 245 219 37 49 chr20 13398600 13398682 -53269323 - MLT1H LTR MaLR -412 143 63 537 246 175 12 chr20 13399796 13400036 -53267969 - LTR16C LTR ERVL -9 482 204 250 349 16 69 chr20 13400036 13400225 -53267780 - LTR16C LTR ERVL -242 249 71 624 210 59 27 chr20 13400698 13400884 -53267121 + MER20 DNA MER1_type 28 219 0 2123 43 86 7 chr20 13400900 13401180 -53266825 + AluY SINE Alu 1 302 -9 233 288 9 54 chr20 13401928 13402039 -53265966 - MIR SINE MIR -65 197 92 2203 248 44 19 chr20 13402108 13402854 -53265151 - L1ME3A LINE L1 -3 6167 5406 457 273 23 0 chr20 13403888 13404020 -53263985 - MLT1H LTR MaLR -23 526 392 219 103 0 0 chr20 13404486 13404525 -53263480 + (TTA)n Simple_repeat Simple_repeat 3 41 0 305 82 20 0 chr20 13404690 13404739 -53263266 + (TGAA)n Simple_repeat Simple_repeat 3 52 0 279 345 98 51 chr20 13404835 13405224 -53262781 - L2 LINE L2 -52 3220 2814 187 284 0 95 chr20 13405528 13405623 -53262382 - L2 LINE L2 -6 3266 3181 837 298 23 12 chr20 13406163 13406490 -53261515 - LTR16A1 LTR ERVL 0 457 151 648 280 69 18 chr20 13406567 13406785 -53261220 - L2 LINE L2 -2284 1030 802 1067 280 98 17 chr20 13406785 13407256 -53260749 + MER20B DNA MER1_type 1 509 -274 538 174 0 32 chr20 13407300 13407455 -53260550 + GA-rich Low_complexity Low_complexity 3 152 0 430 299 122 9 chr20 13408258 13408472 -53259533 - MER102b DNA MER1_type -25 316 79 2267 155 75 20 chr20 13409053 13409881 -53258124 - MER21A LTR ERV1 0 931 1 237 259 45 94 chr20 13409930 13410131 -53257874 + L1ME LINE L1 5457 5647 -474 308 121 35 0 chr20 13410407 13410465 -53257540 + GA-rich Low_complexity Low_complexity 4 63 0 241 309 0 0 chr20 13410478 13410533 -53257472 - Tigger6a DNA MER2_type -2 1081 1027 1529 162 8 113 chr20 13410584 13410973 -53257032 - MER7A DNA MER2_type 0 346 1 3999 185 41 11 chr20 13410979 13411051 -53256954 - Tigger6a DNA MER2_type -718 879 811 2154 130 3 0 chr20 13411051 13411352 -53256653 + AluSx SINE Alu 1 302 -10 3999 185 41 11 chr20 13411352 13412129 -53255876 - Tigger6a DNA MER2_type -786 811 4 24 53 0 0 chr20 13412262 13412300 -53255705 + AT_rich Low_complexity Low_complexity 1 38 0 2450 77 0 0 chr20 13412869 13413179 -53254826 - AluY SINE Alu -1 310 1 393 270 123 56 chr20 13413194 13413446 -53254559 + L2 LINE L2 1553 1821 -1493 1794 242 129 10 chr20 13413446 13413941 -53254064 + MER68 LTR ERV1 1 554 -8 997 283 26 10 chr20 13413947 13414254 -53253751 + L2 LINE L2 1813 2124 -1190 701 290 142 60 chr20 13414257 13414292 -53253713 - L2 LINE L2 -1432 1882 1851 2097 147 7 3 chr20 13414292 13414592 -53253413 - AluSx SINE Alu -11 301 1 701 290 142 60 chr20 13414592 13415069 -53252936 - L2 LINE L2 -1463 1851 1328 283 185 37 0 chr20 13415406 13415460 -53252545 + MER21B LTR ERV1 12 67 -796 2377 244 52 40 chr20 13415498 13416227 -53251778 + MER21B LTR ERV1 19 756 -107 1318 205 18 76 chr20 13416228 13416608 -53251397 - MLT1A1 LTR MaLR 0 365 8 533 328 88 65 chr20 13416723 13417610 -53250395 - L2 LINE L2 -959 2355 1449 233 360 54 0 chr20 13417610 13417721 -53250284 - L2 LINE L2 0 3313 3197 22 0 0 0 chr20 13418260 13418282 -53249723 + AT_rich Low_complexity Low_complexity 1 22 0 439 358 78 20 chr20 13418680 13419024 -53248981 - L2 LINE L2 -24 3289 2926 * 654 331 98 11 chr20 13418997 13419365 -53248640 - L2 LINE L2 -2223 1091 692 2321 217 68 21 chr20 13419530 13420144 -53247861 + MER82 DNA MER2_type 1 643 -10 29 0 0 0 chr20 13420387 13420416 -53247589 + AT_rich Low_complexity Low_complexity 1 29 0 399 284 155 7 chr20 13420768 13420950 -53247055 - L1ME3A LINE L1 -233 5937 5783 444 19 0 0 chr20 13420950 13421003 -53247002 + (TG)n Simple_repeat Simple_repeat 2 54 0 399 284 155 7 chr20 13421003 13421098 -53246907 - L1ME3A LINE L1 -387 5783 5619 255 217 0 0 chr20 13421212 13421272 -53246733 + (TGAA)n Simple_repeat Simple_repeat 2 61 0 527 307 42 0 chr20 13421421 13421610 -53246395 - MIR SINE MIR -62 200 4 1018 71 0 0 chr20 13421643 13421769 -53246236 + AluY SINE Alu 173 298 -13 287 65 22 0 chr20 13421907 13421953 -53246052 + (TG)n Simple_repeat Simple_repeat 2 48 0 606 224 7 22 chr20 13422104 13422311 -53245694 + L1M4 LINE L1 4420 4626 -1520 463 316 76 0 chr20 13422387 13422637 -53245368 - L1M4 LINE L1 -1809 4337 4069 233 0 62 0 chr20 13422680 13422712 -53245293 + (TTTC)n Simple_repeat Simple_repeat 2 35 0 7673 166 97 30 chr20 13422865 13422939 -53245066 - L1MCa LINE L1 -4504 1922 1854 2219 100 0 3 chr20 13422939 13423257 -53244748 - AluSx SINE Alu 0 312 1 7673 166 97 30 chr20 13423257 13424567 -53243438 - L1MCa LINE L1 -4572 1854 633 1967 83 9 98 chr20 13424567 13424733 -53243272 - AluSx SINE Alu -16 296 117 204 40 0 0 chr20 13424733 13424758 -53243247 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2383 47 0 0 chr20 13424758 13425036 -53242969 - AluY SINE Alu -28 283 6 1967 83 9 98 chr20 13425036 13425193 -53242812 - AluSx SINE Alu -193 119 1 7673 166 97 30 chr20 13425193 13425587 -53242418 - L1MCa LINE L1 -5793 633 24 227 188 43 0 chr20 13425624 13425693 -53242312 + (TA)n Simple_repeat Simple_repeat 1 72 0 526 314 56 13 chr20 13425698 13426090 -53241915 - L1M4 LINE L1 -2313 3833 3425 735 178 25 31 chr20 13426325 13426488 -53241517 + MLT1J2 LTR MaLR 17 178 -272 737 239 135 90 chr20 13426512 13427072 -53240933 - MLT1H LTR MaLR -2 553 1 228 211 0 0 chr20 13427216 13427268 -53240737 + MLT1J2 LTR MaLR 366 417 -33 1235 202 4 4 chr20 13427278 13427506 -53240499 - AluJo SINE Alu -21 291 64 286 273 36 0 chr20 13427951 13428061 -53239944 - L1MEd LINE L1 -5961 158 45 440 212 12 0 chr20 13428557 13428642 -53239363 - LTR16C LTR ERVL 0 491 406 1550 163 108 18 chr20 13428760 13429092 -53238913 - MLT1A1 LTR MaLR -3 362 1 783 157 24 0 chr20 13429242 13429372 -53238633 + GA-rich Low_complexity Low_complexity 3 139 -33 2081 170 15 50 chr20 13429372 13429848 -53238157 - MER65C LTR ERV1 -2 459 1 783 157 24 0 chr20 13429848 13429883 -53238122 + GA-rich Low_complexity Low_complexity 139 172 0 208 211 39 0 chr20 13429895 13429947 -53238058 + GA-rich Low_complexity Low_complexity 2 55 0 766 247 11 16 chr20 13431113 13431295 -53236710 + MER5A DNA MER1_type 1 181 -8 720 231 121 10 chr20 13431313 13431512 -53236493 - MER58A DNA MER1_type -3 221 1 485 293 21 14 chr20 13431776 13431916 -53236089 - MIR SINE MIR -109 153 13 2136 145 3 0 chr20 13432040 13432351 -53235654 + AluSx SINE Alu 1 312 0 714 238 9 101 chr20 13432484 13432829 -53235176 - MLT1H LTR MaLR -2 547 171 951 224 224 18 chr20 13432841 13433172 -53234833 + MLT1H LTR MaLR 80 478 -71 311 280 11 0 chr20 13433375 13433468 -53234537 + MLT1H LTR MaLR 119 212 -337 291 274 83 24 chr20 13433985 13434153 -53233852 + LTR33A LTR ERVL 343 520 -3 833 293 85 64 chr20 13434328 13434880 -53233125 + L2 LINE L2 2431 2992 -321 190 388 31 0 chr20 13434973 13435102 -53232903 + L2 LINE L2 3005 3137 -176 308 117 0 33 chr20 13435156 13435216 -53232789 + (TTTC)n Simple_repeat Simple_repeat 3 60 0 307 332 69 57 chr20 13435330 13435679 -53232326 - L2 LINE L2 -746 2568 2216 213 284 11 0 chr20 13435723 13435811 -53232194 + (TA)n Simple_repeat Simple_repeat 2 90 0 521 276 109 42 chr20 13436880 13437282 -53230723 - MLT1J2 LTR MaLR -1 449 21 636 208 89 42 chr20 13437301 13437444 -53230561 + MIR SINE MIR 60 195 -67 2745 68 5 8 chr20 13437444 13437813 -53230192 + L1PA6 LINE L1 5768 6135 -19 198 0 0 0 chr20 13437813 13437835 -53230170 + (TA)n Simple_repeat Simple_repeat 1 22 0 636 208 89 42 chr20 13437835 13437858 -53230147 + MIR SINE MIR 194 235 -27 996 213 76 57 chr20 13437971 13438481 -53229524 + MLT1E2 LTR MaLR 3 503 -2 228 372 22 15 chr20 13438485 13438622 -53229383 - L2 LINE L2 -213 3059 2922 2180 98 21 0 chr20 13438699 13438985 -53229020 + AluSc SINE Alu 1 292 -17 666 291 19 5 chr20 13439262 13439472 -53228533 - LTR16A1 LTR ERVL 0 457 245 295 179 0 0 chr20 13439977 13440033 -53227972 + MER5A DNA MER1_type 132 187 -2 225 292 0 0 chr20 13440063 13440111 -53227894 + MIR SINE MIR 4 51 -211 2139 114 6 25 chr20 13440182 13440499 -53227506 - AluSx SINE Alu -1 311 1 733 130 0 9 chr20 13441272 13441409 -53226596 - AluY SINE Alu 0 311 194 1477 199 23 21 chr20 13441412 13441881 -53226124 + L1MB7 LINE L1 1275 6370 -312 1504 78 0 0 chr20 13441882 13442062 -53225943 + AluY SINE Alu 1 180 -131 1763 113 0 42 chr20 13442179 13442444 -53225561 - AluSx SINE Alu -58 254 1 227 237 17 0 chr20 13443742 13443801 -53224204 + MIR SINE MIR 132 191 -71 703 263 22 0 chr20 13443802 13443981 -53224024 + MER5A DNA MER1_type 4 186 -3 269 319 138 7 chr20 13444011 13444149 -53223856 + MIR SINE MIR 3 158 -104 303 315 77 8 chr20 13444303 13444433 -53223572 + MIR SINE MIR 46 184 -78 2481 184 63 31 chr20 13444492 13445034 -53222971 - MER34B LTR ERV1 0 565 7 932 80 17 11 chr20 13445364 13445377 -53222628 + (TTCCC)n Simple_repeat Simple_repeat 1 189 0 932 80 17 11 chr20 13445377 13445552 -53222453 + (TTCCC)n Simple_repeat Simple_repeat 5 180 0 286 344 16 8 chr20 13445612 13445734 -53222271 - L2 LINE L2 -16 3256 3134 432 0 0 0 chr20 13445740 13445788 -53222217 + (TCCA)n Simple_repeat Simple_repeat 2 49 0 2475 235 24 38 chr20 13446010 13446493 -53221512 - L1ME3A LINE L1 -3 6167 5694 1401 218 21 14 chr20 13446493 13446777 -53221228 + AluJo SINE Alu 5 290 -22 2475 235 24 38 chr20 13446777 13446949 -53221056 - L1ME3A LINE L1 -476 5694 5521 943 169 17 28 chr20 13447655 13447832 -53220173 + FAM SINE Alu 1 175 0 540 295 35 0 chr20 13448027 13448200 -53219805 - MLT1I LTR MaLR 0 409 231 893 272 112 33 chr20 13448306 13448699 -53219306 - MLT1H LTR MaLR -111 438 15 276 185 49 11 chr20 13448752 13448839 -53219166 - MLT1I LTR MaLR -263 146 92 1580 206 55 16 chr20 13450161 13450194 -53217811 + MER63B DNA MER1_type 4 34 -1028 180 0 0 0 chr20 13450194 13450214 -53217791 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1580 206 55 16 chr20 13450214 13450563 -53217442 + MER63B DNA MER1_type 34 401 -35 364 286 23 15 chr20 13450946 13451079 -53216926 + LTR16C LTR ERVL 358 491 0 615 193 99 156 chr20 13451370 13451470 -53216535 + MLT1G LTR MaLR 1 105 -490 2051 180 37 0 chr20 13451470 13451820 -53216185 - MLT1A1 LTR MaLR -1 364 2 615 193 99 156 chr20 13451820 13452057 -53215948 + MLT1G LTR MaLR 105 312 -283 264 137 0 0 chr20 13452064 13452115 -53215890 + (GA)n Simple_repeat Simple_repeat 2 52 0 1241 208 75 57 chr20 13452337 13452465 -53215540 - L1MC4 LINE L1 -5 8037 7913 324 0 0 0 chr20 13452465 13452501 -53215504 + (CA)n Simple_repeat Simple_repeat 2 37 0 1241 208 75 57 chr20 13452501 13452708 -53215297 - L1MC4 LINE L1 -129 7913 7689 2069 123 26 15 chr20 13452708 13453050 -53214955 - L1PA16 LINE L1 -9 6157 5812 1241 208 75 57 chr20 13453050 13453166 -53214839 - L1MC4 LINE L1 -353 7689 7577 377 179 15 0 chr20 13453835 13453902 -53214103 - Charlie4 DNA MER1_type -25 1936 1869 228 146 18 36 chr20 13453942 13453997 -53214008 + LTR13 LTR ERVK 662 715 -292 326 294 19 12 chr20 13453999 13454149 -53213856 + (CATATA)n Simple_repeat Simple_repeat 1 154 -7 3237 194 23 23 chr20 13454149 13454288 -53213717 - MER82 DNA MER2_type 0 653 515 2388 52 3 3 chr20 13454288 13454576 -53213429 + AluY SINE Alu 1 288 -23 3237 194 23 23 chr20 13454576 13455089 -53212916 - MER82 DNA MER2_type -137 516 1 326 294 19 12 chr20 13455089 13455098 -53212907 + (CATATA)n Simple_repeat Simple_repeat 154 161 0 258 151 40 32 chr20 13455201 13455327 -53212678 + (TTATA)n Simple_repeat Simple_repeat 5 131 0 297 260 13 0 chr20 13455531 13455608 -53212397 - MER67D LTR ERV1 -6 508 431 1725 125 23 78 chr20 13455668 13456055 -53211950 - MER67C LTR ERV1 -243 271 6 360 0 0 0 chr20 13457342 13457382 -53210623 + (CA)n Simple_repeat Simple_repeat 2 41 0 369 0 0 0 chr20 13457531 13457572 -53210433 + (TG)n Simple_repeat Simple_repeat 2 42 0 1600 173 3 33 chr20 13457587 13457887 -53210118 - AluJo SINE Alu -21 291 1 278 266 0 32 chr20 13459862 13459956 -53208049 + L1ME3A LINE L1 5906 5996 -174 231 254 63 0 chr20 13459980 13460043 -53207962 + L1ME3A LINE L1 6047 6113 -57 406 232 9 36 chr20 13460178 13460290 -53207715 - L1MD3 LINE L1 -9 7986 7878 565 14 27 0 chr20 13460296 13460370 -53207635 + (TCTA)n Simple_repeat Simple_repeat 2 77 0 824 153 21 14 chr20 13460370 13460514 -53207491 + 7SK RNA RNA 1 145 -48 414 147 0 0 chr20 13460533 13460601 -53207404 + 7SK RNA RNA 121 188 -5 688 42 21 0 chr20 13460601 13460697 -53207308 + (TCTA)n Simple_repeat Simple_repeat 2 99 0 3710 218 30 19 chr20 13460762 13461609 -53206396 - L1MD2 LINE L1 -214 6145 5290 922 292 183 12 chr20 13461995 13462406 -53205599 + LTR16C LTR ERVL 3 483 -8 411 21 0 0 chr20 13462491 13462539 -53205466 + (GA)n Simple_repeat Simple_repeat 2 49 0 303 367 14 14 chr20 13462548 13462695 -53205310 - L2 LINE L2 -343 2971 2825 494 271 115 38 chr20 13463532 13464044 -53203961 - MLT1G1 LTR MaLR 0 595 1 269 257 138 0 chr20 13464276 13464385 -53203620 + MIR SINE MIR 110 233 -29 226 261 65 0 chr20 13465068 13465160 -53202845 - L2 LINE L2 0 3313 3216 1029 273 112 44 chr20 13465160 13465582 -53202423 - LTR16C LTR ERVL 0 491 34 2016 173 57 37 chr20 13465582 13466040 -53201965 - MLT1C LTR MaLR 0 467 1 1029 273 112 44 chr20 13466040 13466072 -53201933 - LTR16C LTR ERVL -457 34 6 1926 131 20 51 chr20 13466108 13466414 -53201591 + MER1B DNA MER1_type 1 296 -2416 3178 143 68 45 chr20 13466414 13467034 -53200971 + MER51A LTR ERV1 1 634 0 1926 131 20 51 chr20 13467034 13467077 -53200928 + MER1B DNA MER1_type 296 339 0 276 192 0 50 chr20 13467078 13467177 -53200828 - L2 LINE L2 -118 3195 3102 208 258 16 0 chr20 13467509 13467571 -53200434 + (CATATA)n Simple_repeat Simple_repeat 4 66 0 2566 66 0 0 chr20 13467800 13468102 -53199903 + AluY SINE Alu 1 302 -9 799 260 20 10 chr20 13469267 13469471 -53198534 + LTR16C LTR ERVL 239 444 -47 2167 128 0 0 chr20 13469837 13470135 -53197870 + AluSx SINE Alu 11 308 -4 622 73 0 0 chr20 13470528 13470610 -53197395 + AluY SINE Alu 2 83 -235 184 258 15 61 chr20 13470926 13470992 -53197013 - L2 LINE L2 0 3272 3210 542 274 161 9 chr20 13472253 13472476 -53195529 + MLT1K LTR MaLR 319 575 -13 263 246 0 15 chr20 13472822 13472887 -53195118 - LTR16C LTR ERVL -136 355 292 205 203 177 38 chr20 13473008 13473087 -53194918 - MIR SINE MIR -72 136 47 319 188 75 56 chr20 13473168 13473328 -53194677 + MER113 DNA MER1_type? 22 184 -337 233 329 0 0 chr20 13473429 13473502 -53194503 + MIR SINE MIR 169 241 -21 300 156 156 31 chr20 13474656 13474720 -53193285 - LTR16C LTR ERVL 0 491 420 1451 48 21 0 chr20 13474886 13475074 -53192931 + LOR1b-int LTR ERV1 5848 6039 -2081 524 167 11 0 chr20 13475076 13475166 -53192839 + LOR1b-int LTR ERV1 8030 8120 0 2350 153 66 14 chr20 13475166 13475603 -53192402 + LOR1b LTR ERV1 1 460 -1 747 105 0 0 chr20 13475876 13475971 -53192034 - LTR12 LTR ERV1 0 714 620 668 206 94 6 chr20 13476451 13476611 -53191394 - MIR SINE MIR -81 181 8 253 252 30 29 chr20 13476782 13476909 -53191096 + MIR SINE MIR 57 184 -78 2673 83 6 0 chr20 13476933 13477283 -53190722 + L1P LINE L1 2 353 -5793 749 193 223 55 chr20 13477400 13477466 -53190539 + MER69 DNA AcHobo 78 132 -2394 2294 162 37 5 chr20 13477466 13477897 -53190108 - L1MB7 LINE L1 0 6184 5740 749 193 223 55 chr20 13477897 13478068 -53189937 + MER69 DNA AcHobo 132 355 -2171 813 161 0 2 chr20 13478077 13478277 -53189728 + MSTC LTR MaLR 3 249 -179 * 1796 140 30 0 chr20 13478275 13478540 -53189465 + MSTC LTR MaLR 66 338 -90 333 161 86 86 chr20 13478640 13478721 -53189284 - LTR30 LTR ERV1 -84 614 479 5190 177 91 52 chr20 13478721 13479956 -53188049 - pTR5 LTR ERV1 -413 2025 743 1520 146 32 0 chr20 13480147 13480393 -53187612 + Tigger7 DNA MER2_type 2238 2491 0 201 378 0 0 chr20 13480984 13481095 -53186910 + MIR3 SINE MIR 44 154 -54 22 0 0 0 chr20 13481720 13481742 -53186263 + AT_rich Low_complexity Low_complexity 1 22 0 191 221 13 39 chr20 13482044 13482121 -53185884 + MIR SINE MIR 76 150 -58 860 239 74 48 chr20 13482900 13483210 -53184795 - MLT1H LTR MaLR -195 354 37 218 354 0 0 chr20 13483265 13483361 -53184644 + (TG)n Simple_repeat Simple_repeat 2 97 0 312 282 173 0 chr20 13483607 13483717 -53184288 + MIR SINE MIR 20 148 -114 1304 201 92 21 chr20 13484516 13484905 -53183100 - MER113 DNA MER1_type? -96 425 9 275 152 0 0 chr20 13484938 13484984 -53183021 - L2 LINE L2 -1 3312 3267 187 323 109 16 chr20 13485069 13485261 -53182744 - L2 LINE L2 -520 2794 2585 184 298 0 0 chr20 13485256 13485303 -53182702 + L2 LINE L2 3248 3294 -19 * 371 289 88 13 chr20 13485371 13485530 -53182475 - MIR3 SINE MIR 0 208 38 1164 277 102 13 chr20 13485712 13486105 -53181900 - MLT1K LTR MaLR -144 444 17 723 275 26 70 chr20 13486141 13486454 -53181551 + L2 LINE L2 2962 3260 -12 294 187 13 32 chr20 13487443 13487598 -53180407 + GA-rich Low_complexity Low_complexity 1 152 0 368 178 14 27 chr20 13487739 13487812 -53180193 - AluS SINE Alu -246 62 1 1457 181 47 29 chr20 13487834 13488111 -53179894 - AluJo SINE Alu -30 282 1 189 175 0 0 chr20 13488215 13488255 -53179750 + G-rich Low_complexity Low_complexity 4 43 0 1665 250 40 10 chr20 13489085 13489489 -53178516 + LTR16C LTR ERVL 69 484 -7 275 200 0 0 chr20 13489689 13489739 -53178266 + L2 LINE L2 3004 3053 -219 323 349 16 8 chr20 13489847 13489973 -53178032 + L2 LINE L2 3187 3313 0 571 231 98 89 chr20 13490433 13490749 -53177256 - MER102b DNA MER1_type -17 324 6 193 326 41 41 chr20 13490907 13491005 -53177000 - MIR SINE MIR -10 252 155 662 251 19 47 chr20 13491107 13491322 -53176683 - MIR SINE MIR -48 214 6 376 283 90 28 chr20 13491417 13491562 -53176443 + MIR SINE MIR 7 160 -102 419 310 62 108 chr20 13491970 13492637 -53175368 + L2 LINE L2 2637 3272 0 201 268 18 0 chr20 13492637 13492693 -53175312 + (TGGA)n Simple_repeat Simple_repeat 2 58 0 491 285 23 41 chr20 13493165 13493337 -53174668 + MIR3 SINE MIR 9 177 -31 699 191 227 0 chr20 13494695 13494920 -53173085 - L2 LINE L2 -598 2716 2441 233 346 82 6 chr20 13494943 13495102 -53172903 + L2 LINE L2 2481 2651 -663 480 269 0 22 chr20 13495392 13495526 -53172479 + MIR SINE MIR 23 153 -109 415 227 127 0 chr20 13495634 13495744 -53172261 + MIR SINE MIR 22 145 -117 210 207 0 0 chr20 13496423 13496481 -53171524 + (CA)n Simple_repeat Simple_repeat 1 58 0 387 337 61 17 chr20 13496594 13496775 -53171230 - MIR SINE MIR -69 193 5 269 222 32 0 chr20 13496867 13496930 -53171075 + MIR SINE MIR 82 146 -62 439 323 92 20 chr20 13497342 13497537 -53170468 - MIR SINE MIR -8 254 46 201 303 81 43 chr20 13498243 13498428 -53169577 - L2 LINE L2 -172 3141 2950 191 234 141 0 chr20 13498555 13498619 -53169386 + L2 LINE L2 3026 3098 -174 633 245 138 73 chr20 13498957 13499114 -53168891 - L2 LINE L2 -248 3065 2920 1826 144 42 0 chr20 13499114 13499398 -53168607 + AluSg SINE Alu 1 296 -14 633 245 138 73 chr20 13499398 13499615 -53168390 - L2 LINE L2 -393 2920 2661 236 208 0 0 chr20 13499616 13499664 -53168341 + (TGAA)n Simple_repeat Simple_repeat 3 50 0 261 281 0 24 chr20 13500272 13500354 -53167651 + GA-rich Low_complexity Low_complexity 2 81 0 679 260 5 31 chr20 13500363 13500555 -53167450 - MIR SINE MIR -19 243 57 662 323 60 47 chr20 13500986 13501370 -53166635 - L2 LINE L2 -1 3271 2883 385 366 16 21 chr20 13501658 13501844 -53166161 + MIR SINE MIR 38 222 -40 619 294 43 24 chr20 13501939 13502150 -53165855 + MIR SINE MIR 48 262 0 229 209 0 0 chr20 13503249 13503292 -53164713 - MIR SINE MIR -55 153 111 572 257 17 0 chr20 13503302 13503468 -53164537 + MIR SINE MIR 20 187 -50 1565 86 222 0 chr20 13605313 13605556 -53062449 - AluY SINE Alu -2 299 3 2082 126 3 20 chr20 13605976 13606277 -53061728 + AluSx SINE Alu 6 301 -11 869 230 32 68 chr20 13606594 13606935 -53061070 + LTR47B LTR ERVL 123 443 0 2468 78 0 0 chr20 13606967 13607263 -53060742 + AluY SINE Alu 1 296 -15 24 0 0 0 chr20 13607287 13607311 -53060694 + AT_rich Low_complexity Low_complexity 1 24 0 2213 109 0 3 chr20 13607320 13607613 -53060392 + AluSq SINE Alu 1 292 -21 1426 173 0 0 chr20 13607720 13607951 -53060054 + AluJb SINE Alu 82 312 0 1324 127 10 15 chr20 13608019 13608216 -53059789 - AluJo SINE Alu -116 196 1 2407 93 0 0 chr20 13608695 13608997 -53059008 + AluSc SINE Alu 1 302 -7 826 168 0 0 chr20 13609655 13609780 -53058225 + FLAM_C SINE Alu 1 125 -18 21 0 0 0 chr20 13609830 13609851 -53058154 + AT_rich Low_complexity Low_complexity 1 21 0 2016 107 4 11 chr20 13609863 13610143 -53057862 + AluSg SINE Alu 1 278 -32 776 171 0 8 chr20 13610569 13610698 -53057307 - FLAM_A SINE Alu -7 135 8 2444 93 0 3 chr20 13611425 13611736 -53056269 - AluSx SINE Alu -2 310 1 1198 249 68 60 chr20 13611969 13612294 -53055711 + L2 LINE L2 1499 1820 -1494 2374 66 3 3 chr20 13612294 13612583 -53055422 + AluSg SINE Alu 1 289 -21 519 17 0 0 chr20 13612586 13612646 -53055359 + (CA)n Simple_repeat Simple_repeat 1 60 0 1198 249 68 60 chr20 13612646 13612786 -53055219 + L2 LINE L2 1821 1972 -1342 1749 179 3 3 chr20 13613017 13613318 -53054687 + AluJb SINE Alu 1 301 -11 2332 96 0 10 chr20 13613755 13614068 -53053937 - AluSg SINE Alu 0 310 1 315 272 39 0 chr20 13614538 13614641 -53053364 + MIR SINE MIR 156 262 0 1868 179 0 0 chr20 13615042 13615339 -53052666 - AluJb SINE Alu -13 299 3 2462 69 0 10 chr20 13615453 13615757 -53052248 + AluY SINE Alu 1 301 -10 644 283 145 25 chr20 13616331 13616607 -53051398 + MLT1K LTR MaLR 7 315 -273 261 314 113 0 chr20 13616669 13616793 -53051212 + MLT1K LTR MaLR 389 526 -62 1637 222 82 2 chr20 13616816 13617217 -53050788 - L1ME1 LINE L1 -30 6136 5704 466 143 0 24 chr20 13617250 13617334 -53050671 - AluJ/FRAM SINE Alu -2 310 229 297 149 0 0 chr20 13617440 13617492 -53050513 + L1M1 LINE L1 5609 5660 -522 1811 146 58 0 chr20 13617493 13617787 -53050218 + AluSq SINE Alu 1 311 -2 716 156 31 39 chr20 13617851 13617979 -53050026 - FLAM_C SINE Alu -10 133 7 2005 139 13 3 chr20 13618012 13618313 -53049692 + AluSx SINE Alu 2 305 -7 24 32 0 0 chr20 13618860 13618891 -53049114 + AT_rich Low_complexity Low_complexity 1 31 0 273 276 13 0 chr20 13619047 13619123 -53048882 - MIR SINE MIR -32 230 154 2499 80 0 0 chr20 13619588 13619890 -53048115 - AluSg SINE Alu -8 302 1 1909 175 0 3 chr20 13620006 13620315 -53047690 - AluSx SINE Alu -4 308 1 2189 107 20 3 chr20 13620572 13620872 -53047133 + AluSx SINE Alu 1 305 -7 1821 175 3 13 chr20 13621324 13621633 -53046372 + AluJo SINE Alu 2 307 -5 1600 165 40 11 chr20 13622294 13622587 -53045418 + AluJo SINE Alu 1 301 0 1745 155 0 59 chr20 13622594 13622730 -53045275 + AluJo SINE Alu 12 154 -158 2452 80 0 7 chr20 13622730 13623032 -53044973 + AluSg SINE Alu 1 300 -10 1745 155 0 59 chr20 13623032 13623199 -53044806 + AluJo SINE Alu 154 297 -15 10566 175 64 114 chr20 13623228 13624272 -53043733 + L1MA3 LINE L1 891 1986 -5579 2060 132 7 0 chr20 13624272 13624560 -53043445 - AluSq SINE Alu -19 294 5 1800 156 0 33 chr20 13624564 13624871 -53043134 - AluJb SINE Alu -15 297 1 10566 175 64 114 chr20 13624871 13625163 -53042842 + L1MA3 LINE L1 1989 2294 -5271 1158 142 0 0 chr20 13625163 13625339 -53042666 + AluSq SINE Alu 138 313 0 10566 175 64 114 chr20 13625339 13625444 -53042561 + L1MA3 LINE L1 2294 2403 -5162 2226 100 3 25 chr20 13625444 13625763 -53042242 + AluSp SINE Alu 1 312 -1 10566 175 64 114 chr20 13625763 13627600 -53040405 + L1MA3 LINE L1 2403 4331 -3234 461 154 43 77 chr20 13627600 13627696 -53040309 + MER50 LTR ERV1 492 586 -148 2279 81 0 3 chr20 13627696 13628003 -53040002 + AluSc SINE Alu 1 306 0 461 154 43 77 chr20 13628003 13628022 -53039983 + MER50 LTR ERV1 586 604 -130 257 146 91 0 chr20 13628029 13628084 -53039921 + THE1B LTR MaLR 195 254 -110 473 176 0 0 chr20 13628085 13628159 -53039846 + MER68 LTR ERV1 204 277 -285 10566 175 64 114 chr20 13628159 13628501 -53039504 + L1MA3 LINE L1 4337 4695 -2870 1823 101 70 28 chr20 13628501 13628787 -53039218 + AluSx SINE Alu 1 298 -14 10566 175 64 114 chr20 13628787 13629462 -53038543 + L1MA3 LINE L1 4695 5402 -2163 2043 90 90 11 chr20 13629462 13629740 -53038265 - AluSp SINE Alu -11 302 3 10566 175 64 114 chr20 13629740 13629989 -53038016 + L1MA3 LINE L1 5402 5662 -1903 2219 118 0 3 chr20 13629989 13630293 -53037712 + AluSg SINE Alu 4 306 -4 10566 175 64 114 chr20 13630293 13630749 -53037256 + L1MA3 LINE L1 5662 6338 -1227 1265 157 60 32 chr20 13630754 13631002 -53037003 - MER34C LTR ERV1 -268 317 63 1957 211 37 102 chr20 13631002 13631066 -53036939 + LTR8 LTR ERV1 1 68 -623 2249 99 3 3 chr20 13631066 13631358 -53036647 - AluSp SINE Alu -21 292 1 1957 211 37 102 chr20 13631358 13631961 -53036044 + LTR8 LTR ERV1 68 625 -66 3529 129 20 20 chr20 13631969 13632498 -53035507 + L1MA3 LINE L1 6325 6853 -871 2498 71 0 16 chr20 13632498 13632808 -53035197 + AluSg SINE Alu 1 305 -5 3529 129 20 20 chr20 13632808 13633189 -53034816 + L1MA3 LINE L1 6853 7238 -486 2253 77 7 11 chr20 13633189 13633475 -53034530 + AluSc SINE Alu 1 285 -24 437 234 89 46 chr20 13633497 13633800 -53034205 - L1MC5 LINE L1 -37 7924 7609 610 250 116 72 chr20 13633827 13634104 -53033901 + L1ME3A LINE L1 4672 4935 -1211 865 126 0 22 chr20 13634104 13634239 -53033766 + FLAM_C SINE Alu 2 133 0 610 250 116 72 chr20 13634239 13634545 -53033460 + L1ME3A LINE L1 4935 5281 -865 774 176 0 7 chr20 13634546 13634682 -53033323 + AluJo SINE Alu 2 136 -176 561 302 68 46 chr20 13634704 13635235 -53032770 + L1ME3A LINE L1 5330 5875 -295 929 130 0 9 chr20 13635255 13635471 -53032534 + AluSx SINE Alu 2 310 0 1659 193 0 13 chr20 13635529 13635840 -53032165 + AluJo SINE Alu 1 307 -5 240 230 0 40 chr20 13635892 13635966 -53032039 + L1ME LINE L1 5725 5795 -326 418 191 0 21 chr20 13636189 13636288 -53031717 + AluJ/FLAM SINE Alu 1 77 -225 1145 87 7 7 chr20 13636297 13636446 -53031559 - AluSq/x SINE Alu -163 149 1 245 343 64 57 chr20 13636581 13636846 -53031159 - L2 LINE L2 -209 3104 2838 766 184 0 53 chr20 13636850 13637002 -53031003 + FRAM SINE Alu 1 144 -32 243 133 0 0 chr20 13637117 13637162 -53030843 + (A)n Simple_repeat Simple_repeat 1 45 0 2263 116 6 0 chr20 13637162 13637473 -53030532 + AluSq SINE Alu 1 313 0 185 289 149 55 chr20 13637478 13637679 -53030326 - L2 LINE L2 -2634 680 461 * 476 268 46 0 chr20 13637676 13637829 -53030176 + MIR SINE MIR 47 206 -56 2371 94 3 0 chr20 13637857 13638155 -53029850 - AluSx SINE Alu -13 299 1 2259 120 0 0 chr20 13638276 13638584 -53029421 - AluSx SINE Alu -4 308 1 218 56 28 0 chr20 13639203 13639239 -53028766 + (GA)n Simple_repeat Simple_repeat 1 37 0 208 203 0 62 chr20 13639281 13639345 -53028660 + G-rich Low_complexity Low_complexity 6 65 0 2344 82 0 53 chr20 13640890 13641209 -53026796 + AluSg SINE Alu 1 302 -8 658 272 74 0 chr20 13641730 13641932 -53026073 - MIR SINE MIR -38 224 8 2136 71 8 4 chr20 13642520 13642788 -53025217 - AluSx SINE Alu -13 299 31 2008 114 17 13 chr20 13643141 13643439 -53024566 + AluSx SINE Alu 1 299 -13 2226 114 0 0 chr20 13643517 13643815 -53024190 - AluSx SINE Alu -14 298 1 2393 87 0 7 chr20 13643913 13644212 -53023793 + AluSc SINE Alu 1 297 -12 911 82 0 44 chr20 13644860 13644995 -53023010 - FLAM_C SINE Alu 0 133 5 1147 148 91 33 chr20 13645008 13645218 -53022787 + AluJb SINE Alu 65 286 -26 2039 122 25 0 chr20 13645226 13645505 -53022500 + AluSx SINE Alu 1 286 -26 305 234 148 23 chr20 13645833 13645961 -53022044 + HAL1 LINE L1 249 392 -2115 696 254 90 27 chr20 13646032 13646288 -53021717 + L1MC4 LINE L1 7768 8039 -3 522 227 200 0 chr20 13646650 13646811 -53021194 - MIR SINE MIR -10 252 62 1521 93 9 37 chr20 13647034 13647249 -53020756 - AluSq SINE Alu -103 210 2 664 161 129 16 chr20 13647357 13647481 -53020524 + AluJo SINE Alu 2 139 -173 1074 191 6 0 chr20 13647649 13647827 -53020178 + AluJo SINE Alu 1 179 -133 890 243 0 11 chr20 13647827 13648016 -53019989 + AluJo SINE Alu 108 294 -18 234 149 0 45 chr20 13648023 13648073 -53019932 + (GGAA)n Simple_repeat Simple_repeat 1 49 -15 2628 46 0 0 chr20 13648073 13648377 -53019628 + AluY SINE Alu 1 304 -7 234 149 0 45 chr20 13648377 13648393 -53019612 + (GGAA)n Simple_repeat Simple_repeat 49 64 0 1388 186 13 4 chr20 13648522 13648759 -53019246 - AluJb SINE Alu -30 282 44 981 233 86 69 chr20 13649133 13649405 -53018600 - L1MC4 LINE L1 -3 8039 7756 2214 87 10 37 chr20 13649405 13649703 -53018302 - AluSx SINE Alu -22 290 1 981 233 86 69 chr20 13649703 13649837 -53018168 - L1MC4 LINE L1 -286 7756 7626 2347 82 7 3 chr20 13649981 13650284 -53017721 + AluSp SINE Alu 1 304 -9 26 0 0 0 chr20 13651171 13651197 -53016808 + GC_rich Low_complexity Low_complexity 1 26 0 2491 73 3 0 chr20 13651779 13652080 -53015925 - AluSp SINE Alu -11 302 1 1246 174 13 13 chr20 13652440 13652664 -53015341 + AluJb SINE Alu 89 312 0 975 95 27 14 chr20 13652957 13653104 -53014901 - MER41B LTR ERV1 0 635 487 2205 81 14 0 chr20 13653104 13653388 -53014617 + AluSp SINE Alu 5 292 -21 615 129 10 0 chr20 13653405 13653506 -53014499 - MER41B LTR ERV1 -533 102 1 643 263 35 25 chr20 13653551 13653749 -53014256 + MIR SINE MIR 18 217 -45 3438 77 20 4 chr20 13653750 13653787 -53014218 - LTR46 LTR ERV1 0 460 425 297 0 0 0 chr20 13653787 13653820 -53014185 + (CA)n Simple_repeat Simple_repeat 2 34 0 3438 77 20 4 chr20 13653820 13654235 -53013770 - LTR46 LTR ERV1 -35 425 1 870 57 0 0 chr20 13654242 13654347 -53013658 + MER41B LTR ERV1 1 105 -530 865 71 32 84 chr20 13654350 13654433 -53013572 + MER41B LTR ERV1 489 562 -73 2382 88 3 0 chr20 13654433 13654730 -53013275 - AluSp SINE Alu -15 298 1 865 71 32 84 chr20 13654730 13654801 -53013204 + MER41B LTR ERV1 562 635 0 2641 103 48 0 chr20 13655006 13655385 -53012620 + LTR8A LTR ERV1 1 397 -330 335 122 0 0 chr20 13655442 13655491 -53012514 + LTR8A LTR ERV1 405 453 -274 9305 91 8 0 chr20 13655492 13656721 -53011284 + Harlequin LTR ERV1 5218 6456 -440 3951 43 11 0 chr20 13656734 13657197 -53010808 + Harlequin LTR ERV1 6428 6895 -1 2040 175 74 43 chr20 13657216 13657551 -53010454 + LTR2B LTR ERV1 32 386 -104 2466 75 0 7 chr20 13657551 13657856 -53010149 - AluY SINE Alu -8 303 1 2040 175 74 43 chr20 13657856 13657965 -53010040 + LTR2B LTR ERV1 386 490 0 796 161 8 0 chr20 13657980 13658110 -53009895 - FLAM_C SINE Alu 0 133 3 2295 102 6 16 chr20 13658114 13658429 -53009576 - AluSp SINE Alu -1 312 1 2400 187 49 21 chr20 13658590 13659171 -53008834 - Tigger7 DNA MER2_type 0 2587 100 1822 171 0 23 chr20 13659172 13659482 -53008523 + AluJb SINE Alu 3 305 -7 2418 87 7 0 chr20 13659484 13659793 -53008212 + AluSp SINE Alu 1 311 -2 1221 145 0 0 chr20 13659793 13659972 -53008033 + AluSg/x SINE Alu 134 312 0 693 148 0 0 chr20 13659975 13660076 -53007929 - Tigger7 DNA MER2_type -623 110 10 301 232 61 0 chr20 13660098 13660180 -53007825 + L2 LINE L2 1942 2028 -1286 495 345 88 44 chr20 13660180 13660728 -53007277 + L2 LINE L2 2306 2877 -437 2506 129 30 10 chr20 13660816 13661211 -53006794 + MER57A LTR ERV1 1 403 0 1003 304 146 3 chr20 13661258 13661636 -53006369 - LTR16A LTR ERVL -2 448 17 1760 170 61 21 chr20 13661641 13661971 -53006034 - MER61A LTR ERV1 0 343 1 955 151 88 12 chr20 13661971 13662331 -53005674 + MER63B DNA MER1_type 3 436 0 2174 122 3 0 chr20 13662578 13662874 -53005131 + AluSx SINE Alu 2 298 -14 2214 89 24 0 chr20 13663415 13663707 -53004298 - AluSx SINE Alu -13 299 1 519 203 134 27 chr20 13664014 13664356 -53003649 + LTR56 LTR ERV1 1 445 0 2285 119 7 0 chr20 13664483 13664793 -53003212 - AluSx SINE Alu 0 312 1 1742 169 197 21 chr20 13664844 13665036 -53002969 + LTR54 LTR ERV1 1 158 -352 2433 68 0 34 chr20 13665036 13665357 -53002648 - AluSg SINE Alu 0 310 1 1742 169 197 21 chr20 13665357 13665577 -53002428 + LTR54 LTR ERV1 158 494 -16 2018 141 10 7 chr20 13665577 13665883 -53002122 - AluSx SINE Alu -5 307 1 1742 169 197 21 chr20 13665883 13665901 -53002104 + LTR54 LTR ERV1 494 508 -2 418 266 53 53 chr20 13665901 13666108 -53001897 + L1ME3A LINE L1 5293 5499 -663 5167 78 6 15 chr20 13666115 13666792 -53001213 - LTR8 LTR ERV1 -20 671 1 372 326 30 62 chr20 13666818 13666930 -53001075 + L1ME3A LINE L1 5542 5656 -514 618 242 204 0 chr20 13666930 13667087 -53000918 + MER5A DNA MER1_type 1 189 0 372 326 30 62 chr20 13667087 13667191 -53000814 + L1ME3A LINE L1 5656 5748 -422 2499 71 0 0 chr20 13667191 13667487 -53000518 + AluY SINE Alu 1 296 -15 372 326 30 62 chr20 13667487 13667573 -53000432 + L1ME3A LINE L1 5748 5835 -335 2582 64 0 0 chr20 13667920 13668231 -52999774 - AluY SINE Alu 0 311 1 2289 102 3 3 chr20 13668242 13668547 -52999458 - AluSp SINE Alu -8 305 1 2259 120 0 0 chr20 13668667 13668975 -52999030 - AluSx SINE Alu -4 308 1 218 56 28 0 chr20 13669594 13669630 -52998375 + (GA)n Simple_repeat Simple_repeat 1 37 0 208 203 0 62 chr20 13669672 13669736 -52998269 + G-rich Low_complexity Low_complexity 6 65 0 2344 82 0 53 chr20 13671282 13671601 -52996404 + AluSg SINE Alu 1 302 -8 3046 181 70 43 chr20 13671810 13672078 -52995927 - L1MC4 LINE L1 -34 8008 7749 2414 86 0 3 chr20 13672078 13672380 -52995625 - AluSq SINE Alu -12 301 1 3046 181 70 43 chr20 13672380 13672675 -52995330 - L1MC4 LINE L1 -293 7749 7418 2376 98 0 0 chr20 13672675 13672972 -52995033 - AluSx SINE Alu -15 297 1 3046 181 70 43 chr20 13672972 13673148 -52994857 - L1MC4 LINE L1 -624 7418 7248 2246 92 23 0 chr20 13673157 13673460 -52994545 - AluSp SINE Alu -3 310 1 1216 136 9 59 chr20 13673462 13673683 -52994322 - AluJo SINE Alu -16 296 87 470 214 5 91 chr20 13673683 13673765 -52994240 - L1MC4 LINE L1 -802 7240 7181 2222 128 0 0 chr20 13673765 13674062 -52993943 + AluJo SINE Alu 1 297 -15 470 214 5 91 chr20 13674062 13674166 -52993839 - L1MC4 LINE L1 -861 7181 7070 22 56 0 0 chr20 13674172 13674208 -52993797 + AT_rich Low_complexity Low_complexity 1 36 0 1648 198 34 14 chr20 13674296 13674645 -52993360 - L1MC4 LINE L1 -956 7086 6731 276 77 0 0 chr20 13674670 13674709 -52993296 + (CATATA)n Simple_repeat Simple_repeat 6 44 0 2029 160 27 15 chr20 13674709 13675046 -52992959 + MER2 DNA MER2_type 3 343 -1 335 167 0 17 chr20 13675056 13675116 -52992889 - MLT1A1 LTR MaLR -303 62 4 945 196 44 9 chr20 13675119 13675298 -52992707 + L1M4 LINE L1 5026 5197 -949 1239 146 5 19 chr20 13675298 13675511 -52992494 + L1PA15 LINE L1 5954 6163 -2 945 196 44 9 chr20 13675511 13675569 -52992436 + L1M4 LINE L1 5197 5251 -895 1936 153 6 31 chr20 13675569 13675889 -52992116 + AluJb SINE Alu 1 312 0 945 196 44 9 chr20 13675889 13675912 -52992093 + L1M4 LINE L1 5251 5309 -837 538 225 19 86 chr20 13675896 13676105 -52991900 + L1ME LINE L1 4463 4657 -1489 * 2473 68 3 13 chr20 13676550 13676861 -52991144 - AluSq SINE Alu -5 308 1 2384 51 7 7 chr20 13677035 13677328 -52990677 - AluY SINE Alu -17 294 2 2473 80 3 0 chr20 13677526 13677828 -52990177 + AluSc SINE Alu 2 304 -5 490 243 98 71 chr20 13678240 13678383 -52989622 + L1ME LINE L1 4643 4781 -1365 2106 100 9 81 chr20 13678383 13678703 -52989302 + AluSx SINE Alu 1 297 -15 490 243 98 71 chr20 13678703 13678717 -52989288 + L1ME LINE L1 4781 4793 -1353 318 50 0 0 chr20 13678717 13678757 -52989248 + (TG)n Simple_repeat Simple_repeat 1 40 0 490 243 98 71 chr20 13678757 13678923 -52989082 + L1ME LINE L1 4793 4976 -1170 2031 153 0 7 chr20 13678970 13679278 -52988727 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr20 13679299 13679320 -52988685 + AT_rich Low_complexity Low_complexity 1 21 0 2121 94 31 3 chr20 13679457 13679745 -52988260 + AluSq SINE Alu 1 296 -17 882 264 79 53 chr20 13679748 13680307 -52987698 + L1ME LINE L1 5133 5710 -452 2099 98 0 45 chr20 13680307 13680457 -52987548 + L1MA3 LINE L1 2903 3058 -4507 1869 136 0 4 chr20 13680457 13680743 -52987262 + AluSx SINE Alu 21 305 0 2099 98 0 45 chr20 13680743 13680927 -52987078 + L1MA3 LINE L1 3058 3223 -4342 2340 95 0 7 chr20 13680931 13681235 -52986770 + AluSg SINE Alu 1 302 -8 1956 156 6 16 chr20 13681247 13681562 -52986443 + AluSx SINE Alu 1 312 0 11363 31 5 71 chr20 13681597 13681709 -52986296 + SVA Other Other 1 1382 -1285 11363 31 6 69 chr20 13681709 13683168 -52984837 + SVA Other Other 17 1382 -4 16652 146 22 20 chr20 13683187 13683297 -52984708 + L1MA3 LINE L1 3207 3315 -4404 2340 98 3 3 chr20 13683297 13683602 -52984403 - AluSp SINE Alu -8 305 1 16652 146 22 20 chr20 13683602 13684771 -52983234 + L1MA3 LINE L1 3315 4481 -3238 2427 111 0 29 chr20 13684771 13685115 -52982890 + MER1B DNA MER1_type 4 337 0 16652 146 22 20 chr20 13685115 13687784 -52980221 + L1MA3 LINE L1 4481 7145 -574 1721 104 96 4 chr20 13687784 13688059 -52979946 - AluSc SINE Alu 0 304 7 2342 90 0 3 chr20 13688063 13688363 -52979642 - AluSg1 SINE Alu -10 299 1 16652 146 22 20 chr20 13688363 13688700 -52979305 + L1MA3 LINE L1 7147 7482 -237 2271 100 3 0 chr20 13688700 13688989 -52979016 - AluSp SINE Alu -23 290 1 16652 146 22 20 chr20 13688989 13689015 -52978990 + L1MA3 LINE L1 7482 7506 -213 2176 125 0 7 chr20 13689015 13689319 -52978686 + AluSq SINE Alu 1 302 -11 16652 146 22 20 chr20 13689319 13689510 -52978495 + L1MA3 LINE L1 7506 7713 -6 2229 120 3 0 chr20 13689518 13689817 -52978188 - AluSx SINE Alu -12 300 1 1944 163 7 0 chr20 13689884 13690262 -52977743 - AluSx SINE Alu 0 382 3 2428 90 0 0 chr20 13690313 13690614 -52977391 - AluSg SINE Alu -7 303 3 634 292 216 16 chr20 13691136 13691506 -52976499 + LTR16A LTR ERVL 2 445 -5 1853 156 3 10 chr20 13691564 13691865 -52976140 + AluJo SINE Alu 1 299 -13 2239 101 0 35 chr20 13692032 13692349 -52975656 - AluSg SINE Alu -4 306 1 265 98 0 0 chr20 13692404 13692441 -52975564 - AluJ/FRAM SINE Alu -49 253 221 300 302 33 71 chr20 13692665 13692877 -52975128 - MIR3 SINE MIR -3 205 2 2184 106 3 0 chr20 13693078 13693360 -52974645 + AluSx SINE Alu 1 307 0 217 0 0 0 chr20 13693360 13693384 -52974621 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 2383 226 41 88 chr20 13693778 13693944 -52974061 - L1ME2 LINE L1 -10 6154 5982 2054 150 2 74 chr20 13693944 13694182 -52973823 - MLT1A1 LTR MaLR 0 365 164 1955 128 32 3 chr20 13694182 13694464 -52973541 - AluJb SINE Alu -22 290 1 2054 150 2 74 chr20 13694464 13694618 -52973387 - MLT1A1 LTR MaLR -201 164 1 2383 226 41 88 chr20 13694618 13694988 -52973017 - L1ME2 LINE L1 -182 5982 5682 1553 174 3 28 chr20 13694988 13695270 -52972735 - AluJo SINE Alu -37 275 1 2383 226 41 88 chr20 13695270 13695719 -52972286 - L1ME2 LINE L1 -482 5682 5214 252 241 71 71 chr20 13696263 13696404 -52971601 + L2 LINE L2 3173 3313 0 216 0 0 0 chr20 13696470 13696494 -52971511 + (CAA)n Simple_repeat Simple_repeat 1 24 0 2259 100 3 3 chr20 13696520 13696809 -52971196 - AluSq SINE Alu -24 289 1 268 261 0 58 chr20 13697599 13697668 -52970337 + L2 LINE L2 3201 3265 -7 225 174 109 0 chr20 13697942 13697988 -52970017 - MER5A DNA MER1_type 0 189 139 758 201 35 85 chr20 13698088 13698224 -52969781 + MER5A DNA MER1_type 1 125 -64 2092 122 23 10 chr20 13698224 13698528 -52969477 - AluSx SINE Alu -1 311 4 758 201 35 85 chr20 13698528 13698590 -52969415 + MER5A DNA MER1_type 125 189 0 384 195 39 13 chr20 13698974 13699051 -52968954 + MLT1A2 LTR MaLR 285 363 -11 213 111 0 0 chr20 13699099 13699126 -52968879 + (T)n Simple_repeat Simple_repeat 1 27 0 1933 93 26 84 chr20 13699232 13699543 -52968462 - AluSq SINE Alu -14 299 7 4878 91 28 10 chr20 13699673 13700352 -52967653 + LTR8 LTR ERV1 1 691 0 186 43 0 0 chr20 13701040 13701063 -52966942 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2096 108 10 26 chr20 13701175 13701482 -52966523 + AluSq SINE Alu 1 302 -11 26 0 0 0 chr20 13702028 13702054 -52965951 + AT_rich Low_complexity Low_complexity 1 26 0 454 327 56 0 chr20 13702529 13702691 -52965314 - L3 LINE CR1 -2 1575 1405 267 244 73 73 chr20 13702850 13703014 -52964991 - HAL1 LINE L1 -2307 200 37 2424 67 3 22 chr20 13703062 13703376 -52964629 - AluSp SINE Alu -3 310 3 462 304 264 6 chr20 13703404 13703726 -52964279 - L3 LINE CR1 -737 840 436 1897 138 47 0 chr20 13704242 13704518 -52963487 - AluSx SINE Alu -21 291 3 648 267 174 28 chr20 13704608 13704896 -52963109 + LTR33 LTR ERVL 3 332 -189 274 202 29 58 chr20 13704925 13705029 -52962976 + LTR33 LTR ERVL 397 497 -24 548 236 113 2 chr20 13705326 13705556 -52962449 + L1ME3A LINE L1 5232 5482 -688 693 188 0 36 chr20 13705626 13705764 -52962241 - FLAM_C SINE Alu -5 138 6 774 301 28 19 chr20 13705768 13706127 -52961878 + L1ME3A LINE L1 5552 5828 -342 2194 91 0 18 chr20 13706224 13706538 -52961467 + AluY SINE Alu 1 309 0 3472 125 13 15 chr20 13706575 13707103 -52960902 + MER1A DNA MER1_type 1 527 0 2058 112 48 3 chr20 13707340 13707635 -52960370 - AluSg SINE Alu -2 308 1 2408 42 59 0 chr20 13707753 13708042 -52959963 - AluY SINE Alu -5 306 1 1561 132 82 4 chr20 13708574 13708831 -52959174 + AluJb SINE Alu 35 311 -1 244 247 55 14 chr20 13709380 13709453 -52958552 - MIR3 SINE MIR -41 167 92 383 278 16 8 chr20 13709498 13709624 -52958381 - MIR SINE MIR -61 147 21 648 241 50 131 chr20 13709987 13710231 -52957774 - L1MC4a LINE L1 -1911 5897 5635 1001 218 51 14 chr20 13710231 13710447 -52957558 + MER58A DNA MER1_type 1 224 0 648 241 50 131 chr20 13710447 13710461 -52957544 - L1MC4a LINE L1 -2173 5635 5621 2004 130 3 38 chr20 13710461 13710777 -52957228 - AluSx SINE Alu -7 305 1 648 241 50 131 chr20 13710777 13710978 -52957027 - L1MC4a LINE L1 -2187 5621 5489 2084 105 14 0 chr20 13710978 13711274 -52956731 - L1MA2 LINE L1 -3 6301 6002 648 241 50 131 chr20 13711274 13711376 -52956629 - L1MC4a LINE L1 -2319 5489 5380 255 257 97 53 chr20 13711614 13711727 -52956278 - LTR67 LTR ERVL -424 133 16 2067 122 27 0 chr20 13711785 13711953 -52956052 - AluSx SINE Alu -9 303 122 234 0 0 0 chr20 13711953 13711979 -52956026 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 2067 122 27 0 chr20 13711979 13712105 -52955900 - AluSx SINE Alu -190 122 1 284 213 0 0 chr20 13712675 13712736 -52955269 + L1ME LINE L1 5758 5818 -303 566 193 133 18 chr20 13712884 13713050 -52954955 - LTR16A1 LTR ERVL 0 457 273 2107 111 7 26 chr20 13713530 13713836 -52954169 - AluSq SINE Alu -11 302 3 945 178 25 0 chr20 13713836 13713993 -52954012 - FRAM SINE Alu -14 162 2 1927 136 13 23 chr20 13714150 13714290 -52953715 + AluSx SINE Alu 3 143 -169 2201 107 0 32 chr20 13714290 13714598 -52953407 + AluSx SINE Alu 1 298 -14 1927 136 13 23 chr20 13714598 13714758 -52953247 + AluSx SINE Alu 143 300 -12 712 193 0 15 chr20 13715023 13715158 -52952847 + FLAM_C SINE Alu 1 133 0 252 281 109 0 chr20 13715619 13715683 -52952322 + MLT1I LTR MaLR 197 267 -142 2024 139 3 19 chr20 13715815 13716132 -52951873 + AluSx SINE Alu 1 312 0 1814 171 0 7 chr20 13716189 13716488 -52951517 + AluSx SINE Alu 1 297 -15 1978 124 16 7 chr20 13716725 13717031 -52950974 + AluSx SINE Alu 1 309 -3 2131 94 0 63 chr20 13717464 13717783 -52950222 - AluSg SINE Alu -10 300 2 2124 111 14 3 chr20 13717931 13718228 -52949777 + AluSx SINE Alu 2 301 -11 2140 101 4 0 chr20 13718366 13718642 -52949363 + AluSq SINE Alu 1 277 -36 1078 128 17 17 chr20 13719195 13719367 -52948638 - AluSq SINE Alu -9 304 133 298 296 91 15 chr20 13719494 13719693 -52948312 - L2 LINE L2 -746 2568 2355 2578 80 0 0 chr20 13719696 13720008 -52947997 + AluSx SINE Alu 1 312 0 1335 152 0 19 chr20 13720052 13720262 -52947743 + AluJo SINE Alu 85 290 -22 439 289 113 8 chr20 13720298 13720554 -52947451 - L2 LINE L2 -1052 2262 1980 1958 122 51 10 chr20 13720635 13720930 -52947075 + AluJb SINE Alu 1 307 -5 29 28 0 0 chr20 13720970 13721006 -52946999 + AT_rich Low_complexity Low_complexity 1 36 0 967 267 100 50 chr20 13721020 13721421 -52946584 + HAL1 LINE L1 382 802 -1705 243 0 0 0 chr20 13721432 13721459 -52946546 + (GA)n Simple_repeat Simple_repeat 1 27 0 588 259 0 0 chr20 13721459 13721567 -52946438 - FLAM_A SINE Alu -34 108 1 302 273 0 15 chr20 13721585 13721651 -52946354 - AluSg/x SINE Alu -113 189 125 246 143 0 0 chr20 13721663 13721698 -52946307 + L1M1 LINE L1 1882 1916 -5649 1833 156 0 3 chr20 13721720 13722002 -52946003 - AluJb SINE Alu -31 281 1 2220 75 0 34 chr20 13722012 13722304 -52945701 - AluY SINE Alu -16 295 14 1789 176 24 0 chr20 13722311 13722607 -52945398 - AluJo SINE Alu -9 303 1 1928 119 32 7 chr20 13722625 13722902 -52945103 - AluSg SINE Alu -24 286 3 2118 117 7 0 chr20 13722908 13723227 -52944778 - AluSx SINE Alu 0 321 1 719 113 35 9 chr20 13723255 13723370 -52944635 + L1M1 LINE L1 16 133 -7432 * 16351 136 18 60 chr20 13723367 13724521 -52943484 + L1M1 LINE L1 1099 2300 -5424 2049 127 0 25 chr20 13724521 13724836 -52943169 - AluSx SINE Alu -5 307 1 16351 136 18 60 chr20 13724836 13725075 -52942930 + L1M1 LINE L1 2300 2548 -5176 2620 64 0 0 chr20 13725075 13725386 -52942619 + AluY SINE Alu 1 311 0 16351 136 18 60 chr20 13725386 13725550 -52942455 + L1M1 LINE L1 2548 2717 -5007 2477 84 0 25 chr20 13725550 13725871 -52942134 + AluSq SINE Alu 1 313 0 16351 136 18 60 chr20 13725871 13726325 -52941680 + L1M1 LINE L1 2717 3189 -4535 1895 172 0 7 chr20 13726325 13726633 -52941372 + AluJo SINE Alu 3 308 -4 16351 136 18 60 chr20 13726633 13726861 -52941144 + L1M1 LINE L1 3189 3425 -4299 2504 73 0 0 chr20 13726861 13727164 -52940841 - AluY SINE Alu -8 303 1 16351 136 18 60 chr20 13727164 13727677 -52940328 + L1M1 LINE L1 3425 3958 -3766 2201 98 0 11 chr20 13727677 13727999 -52940006 + AluSx SINE Alu 1 319 0 16351 136 18 60 chr20 13727999 13728490 -52939515 + L1M1 LINE L1 3958 4468 -3256 2550 82 0 0 chr20 13728490 13728796 -52939209 + AluSq SINE Alu 2 307 -6 16351 136 18 60 chr20 13728796 13728976 -52939029 + L1M1 LINE L1 4468 4654 -3070 2340 104 0 0 chr20 13728976 13729275 -52938730 + AluSc SINE Alu 1 299 -10 16351 136 18 60 chr20 13729275 13729298 -52938707 + L1M1 LINE L1 4654 4676 -3048 249 33 0 0 chr20 13729298 13729328 -52938677 + (TA)n Simple_repeat Simple_repeat 1 30 0 16351 136 18 60 chr20 13729328 13730236 -52937769 + L1M1 LINE L1 4676 5621 -2103 2527 80 0 0 chr20 13730236 13730538 -52937467 + AluY SINE Alu 1 302 -9 16351 136 18 60 chr20 13730538 13730619 -52937386 + L1M1 LINE L1 5621 5704 -2020 2366 93 0 10 chr20 13730619 13730921 -52937084 + AluSq SINE Alu 1 299 -14 16351 136 18 60 chr20 13730921 13731235 -52936770 + L1M1 LINE L1 5704 6030 -1694 733 175 0 29 chr20 13731235 13731372 -52936633 + FLAM_C SINE Alu 2 134 -9 16351 136 18 60 chr20 13731372 13731390 -52936615 + L1M1 LINE L1 6030 6047 -1677 2305 117 0 0 chr20 13731390 13731690 -52936315 - AluSx SINE Alu -12 300 1 2119 126 20 0 chr20 13731692 13731986 -52936019 - AluSx SINE Alu -12 300 1 16351 136 18 60 chr20 13731986 13733139 -52934866 + L1M1 LINE L1 6048 6873 -851 1902 141 0 0 chr20 13733139 13733442 -52934563 + AluSx SINE Alu 14 316 0 16351 136 18 60 chr20 13733442 13733736 -52934269 + L1M1 LINE L1 6873 7178 -546 624 252 55 67 chr20 13733729 13733900 -52934105 + HAL1 LINE L1 1842 2009 -498 * 2514 78 0 0 chr20 13733900 13734209 -52933796 + AluSc SINE Alu 1 309 0 624 252 55 67 chr20 13734209 13734382 -52933623 + HAL1 LINE L1 2009 2182 -325 4195 147 21 36 chr20 13734382 13734664 -52933341 + L1PA16 LINE L1 5409 5694 -472 2350 119 0 0 chr20 13734664 13734974 -52933031 + AluSx SINE Alu 1 310 -2 2015 92 38 17 chr20 13734980 13735095 -52932910 + AluSx SINE Alu 13 124 -188 261 0 0 0 chr20 13735095 13735124 -52932881 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2015 92 38 17 chr20 13735124 13735301 -52932704 + AluSx SINE Alu 124 311 -1 4195 147 21 36 chr20 13735301 13735778 -52932227 + L1PA16 LINE L1 5699 6163 -3 954 173 103 130 chr20 13735871 13736172 -52931833 + AluSx SINE Alu 2 294 -8 24 53 0 0 chr20 13736236 13736274 -52931731 + AT_rich Low_complexity Low_complexity 1 38 0 2375 96 0 0 chr20 13736274 13736566 -52931439 + AluSx SINE Alu 1 292 -20 685 188 0 23 chr20 13736576 13736709 -52931296 - FLAM_C SINE Alu -3 130 1 458 143 29 0 chr20 13738343 13738442 -52929563 - AluSp/q SINE Alu 0 314 214 1325 108 114 114 chr20 13738454 13738751 -52929254 - AluSq SINE Alu -16 297 1 385 146 90 67 chr20 13739003 13739092 -52928913 + AluSp SINE Alu 130 220 -83 1555 133 28 8 chr20 13739103 13739351 -52928654 + AluJo SINE Alu 41 293 -19 281 296 176 19 chr20 13739515 13739674 -52928331 + L2 LINE L2 2579 2762 -552 209 226 21 118 chr20 13739703 13739796 -52928209 + L2 LINE L2 2882 2965 -349 500 267 7 7 chr20 13739951 13740086 -52927919 + MIR SINE MIR 30 164 -98 339 239 198 0 chr20 13740136 13740303 -52927702 + L2 LINE L2 3114 3313 0 1782 69 17 79 chr20 13740373 13740664 -52927341 + AluSc SINE Alu 1 273 -36 180 0 0 0 chr20 13740940 13740960 -52927045 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2261 110 0 0 chr20 13740965 13741264 -52926741 - AluSx SINE Alu -13 299 1 1771 166 99 3 chr20 13741264 13741608 -52926397 - L1MB2 LINE L1 -40 6131 5755 2354 84 0 7 chr20 13741613 13741910 -52926095 - AluY SINE Alu -16 295 1 2217 105 7 0 chr20 13741915 13742210 -52925795 - AluSx SINE Alu -15 297 1 1045 209 55 0 chr20 13742247 13742501 -52925504 - L1M4 LINE L1 -3244 2902 2635 771 171 27 126 chr20 13742506 13742728 -52925277 - MLT1A1 LTR MaLR -4 361 162 1727 79 9 0 chr20 13742749 13742965 -52925040 - AluY SINE Alu -11 300 83 1691 164 15 4 chr20 13742965 13743233 -52924772 + AluJo SINE Alu 23 293 -19 2420 80 0 0 chr20 13743408 13743707 -52924298 - AluY SINE Alu -12 299 1 1664 178 45 7 chr20 13743868 13744155 -52923850 - AluJo SINE Alu -14 298 1 1343 164 17 0 chr20 13746116 13746348 -52921657 + MER46A DNA MER2_type 1 236 0 657 74 0 0 chr20 13746391 13746472 -52921533 + FLAM_A SINE Alu 40 120 -22 21 0 0 0 chr20 13746791 13746812 -52921193 + AT_rich Low_complexity Low_complexity 1 21 0 2079 113 6 35 chr20 13746919 13747230 -52920775 + AluSx SINE Alu 1 302 -10 1871 115 22 62 chr20 13747814 13748136 -52919869 - AluSx SINE Alu -3 309 1 344 216 78 0 chr20 13748325 13748427 -52919578 + L1ME4a LINE L1 5740 5849 -272 213 39 0 0 chr20 13748647 13748673 -52919332 + (TA)n Simple_repeat Simple_repeat 2 27 0 2341 81 0 29 chr20 13748694 13749002 -52919003 - AluSg SINE Alu -11 299 1 620 143 109 0 chr20 13749043 13749162 -52918843 + AluJb SINE Alu 1 132 -180 541 343 72 33 chr20 13749366 13749425 -52918580 - L1M4 LINE L1 -777 5369 5314 1821 142 10 43 chr20 13749425 13749586 -52918419 - AluSx SINE Alu -20 292 127 2404 52 7 23 chr20 13749586 13749894 -52918111 - AluY SINE Alu -8 303 1 1972 121 0 33 chr20 13749897 13750203 -52917802 - AluSc SINE Alu -13 296 1 1821 142 10 43 chr20 13750203 13750339 -52917666 - AluSx SINE Alu -187 125 1 541 343 72 33 chr20 13750339 13750578 -52917427 - L1M4 LINE L1 -832 5314 5086 2083 99 31 0 chr20 13750578 13750871 -52917134 + AluSx SINE Alu 1 302 -10 541 343 72 33 chr20 13750871 13751110 -52916895 - L1M4 LINE L1 -1060 5086 4810 1982 40 0 0 chr20 13751317 13751545 -52916460 - AluY SINE Alu -10 301 74 317 375 50 0 chr20 13752306 13752466 -52915539 - L2 LINE L2 -1 3271 3104 2051 152 3 0 chr20 13752775 13753077 -52914928 - AluSx SINE Alu -9 303 1 1415 103 5 15 chr20 13753133 13753336 -52914669 - AluSq SINE Alu -112 201 1 239 163 0 0 chr20 13753336 13753385 -52914620 - L1M3 LINE L1 -350 5830 5782 756 133 30 59 chr20 13754302 13754437 -52913568 - FLAM_C SINE Alu -2 131 1 250 211 96 29 chr20 13754897 13755001 -52913004 - L1ME4a LINE L1 -65 6056 5946 1186 133 0 0 chr20 13755046 13755211 -52912794 - AluSg/x SINE Alu -11 299 135 431 284 53 5 chr20 13755211 13755401 -52912604 - L1MC4a LINE L1 -1915 5893 5695 2216 106 10 3 chr20 13755411 13755712 -52912293 - AluSx SINE Alu -9 303 1 587 91 0 0 chr20 13756117 13756194 -52911811 + AluSq SINE Alu 128 204 -109 180 111 0 0 chr20 13756194 13756221 -52911784 + (A)n Simple_repeat Simple_repeat 1 27 0 2142 129 13 0 chr20 13756349 13756652 -52911353 + AluSx SINE Alu 1 307 -5 363 250 0 31 chr20 13757128 13757224 -52910781 - L1MC4 LINE L1 -1339 6703 6611 2523 68 0 6 chr20 13757302 13757613 -52910392 - AluY SINE Alu -2 309 1 2417 82 0 0 chr20 13757618 13757912 -52910093 - AluSx SINE Alu -18 294 1 36 53 0 0 chr20 13757986 13758043 -52909962 + AT_rich Low_complexity Low_complexity 1 57 0 1062 135 0 35 chr20 13760329 13760499 -52907506 - FRAM SINE Alu -15 161 1 2239 100 7 0 chr20 13760596 13760895 -52907110 - AluSp SINE Alu -12 301 1 1351 127 34 0 chr20 13762859 13763064 -52904941 - AluJo SINE Alu -15 297 86 2091 108 21 0 chr20 13763178 13763464 -52904541 - AluSg SINE Alu -18 292 1 2308 109 0 6 chr20 13763877 13764189 -52903816 + AluSg SINE Alu 1 310 0 2239 114 7 0 chr20 13764192 13764489 -52903516 + AluSg SINE Alu 3 301 -9 2285 179 77 17 chr20 13765197 13765677 -52902328 + LTR22 LTR ERVK 1 509 0 871 203 106 86 chr20 13765878 13766017 -52901988 + L1MD2 LINE L1 5982 6117 -242 225 94 0 0 chr20 13766017 13766049 -52901956 + (CATA)n Simple_repeat Simple_repeat 3 34 0 871 203 106 86 chr20 13766049 13766134 -52901871 + L1MD2 LINE L1 6117 6199 -160 1562 93 8 0 chr20 13766134 13766370 -52901635 - L1MA2 LINE L1 0 6304 6067 871 203 106 86 chr20 13766370 13766494 -52901511 + L1MD2 LINE L1 6199 6338 -21 2256 123 0 0 chr20 13766637 13766939 -52901066 - AluSx SINE Alu -10 302 1 291 250 54 76 chr20 13767250 13767434 -52900571 + L1ME LINE L1 5550 5729 -441 2217 112 3 0 chr20 13767449 13767744 -52900261 + AluSc SINE Alu 1 296 -13 3076 109 122 73 chr20 13767762 13768317 -52899688 + Tigger3b DNA MER2_type 5 598 -2430 1703 165 10 19 chr20 13768317 13768626 -52899379 + AluJb SINE Alu 2 307 -5 3076 109 122 73 chr20 13768626 13768724 -52899281 + Tigger3b DNA MER2_type 598 690 -541 1138 169 42 5 chr20 13768738 13768927 -52899078 - AluJb SINE Alu -91 221 26 1973 163 9 15 chr20 13769456 13769794 -52898211 - MER1B DNA MER1_type 0 337 2 1344 130 219 12 chr20 13769807 13770053 -52897952 - AluSx SINE Alu -15 297 1 2255 107 0 13 chr20 13771038 13771347 -52896658 + AluSx SINE Alu 1 305 -7 734 272 74 0 chr20 13771811 13772013 -52895992 - MIR SINE MIR -38 224 8 277 290 85 60 chr20 13772479 13772601 -52895404 + MARNA DNA Mariner 28 158 -428 2300 93 3 3 chr20 13772601 13772901 -52895104 - AluSx SINE Alu -12 300 1 277 290 85 60 chr20 13772901 13772978 -52895027 + MARNA DNA Mariner 158 232 -354 2081 112 16 10 chr20 13773125 13773428 -52894577 + AluSx SINE Alu 1 305 -7 2173 117 0 0 chr20 13773506 13773804 -52894201 - AluSx SINE Alu -14 298 1 2374 87 0 7 chr20 13773902 13774201 -52893804 + AluSc SINE Alu 1 297 -12 910 82 0 44 chr20 13774851 13774986 -52893019 - FLAM_C SINE Alu 0 133 5 1124 152 91 33 chr20 13774999 13775209 -52892796 + AluJb SINE Alu 65 286 -26 2016 122 25 0 chr20 13775217 13775496 -52892509 + AluSx SINE Alu 1 286 -26 255 248 159 0 chr20 13775839 13775952 -52892053 + HAL1 LINE L1 262 392 -2115 610 252 91 28 chr20 13776023 13776277 -52891728 + L1MC4 LINE L1 7768 8037 -5 584 241 187 0 chr20 13776641 13776807 -52891198 - MIR SINE MIR -10 252 56 196 250 62 0 chr20 13776827 13776875 -52891130 + L2 LINE L2 3259 3309 -4 1497 97 9 37 chr20 13777023 13777240 -52890765 - AluSq SINE Alu -101 212 2 663 160 128 16 chr20 13777347 13777472 -52890533 + AluJo SINE Alu 1 139 -173 1081 191 6 0 chr20 13777640 13777818 -52890187 + AluJo SINE Alu 1 179 -133 887 243 0 11 chr20 13777818 13778007 -52889998 + AluJo SINE Alu 108 294 -18 234 149 0 45 chr20 13778014 13778064 -52889941 + (GGAA)n Simple_repeat Simple_repeat 1 49 -15 2636 45 0 0 chr20 13778064 13778375 -52889630 + AluY SINE Alu 1 311 0 234 149 0 45 chr20 13778375 13778391 -52889614 + (GGAA)n Simple_repeat Simple_repeat 49 64 0 1390 186 13 4 chr20 13778519 13778756 -52889249 - AluJb SINE Alu -30 282 44 634 233 97 50 chr20 13779132 13779390 -52888615 - L1MC4 LINE L1 -5 8037 7768 2004 97 23 53 chr20 13779402 13779701 -52888304 - AluSx SINE Alu -22 290 1 5551 114 38 24 chr20 13779701 13780215 -52887790 - L1 LINE L1 -3757 3808 3303 2482 75 0 0 chr20 13780215 13780522 -52887483 + AluY SINE Alu 1 307 -4 5551 114 38 24 chr20 13780522 13780750 -52887255 - L1 LINE L1 -4262 3303 3080 1898 172 0 7 chr20 13780750 13781058 -52886947 - AluJo SINE Alu -4 308 3 5551 114 38 24 chr20 13781058 13781475 -52886530 - L1 LINE L1 -4485 3080 2631 212 100 0 60 chr20 13781476 13781526 -52886479 + (T)n Simple_repeat Simple_repeat 1 47 0 533 281 44 0 chr20 13781748 13781908 -52886097 + MIR SINE MIR 40 206 -56 2314 91 0 7 chr20 13781936 13782234 -52885771 - AluSc SINE Alu -13 296 1 316 233 89 0 chr20 13783792 13783882 -52884123 + MIR SINE MIR 118 215 -47 444 219 163 64 chr20 13784043 13784294 -52883711 - L2 LINE L2 -22 3291 3016 * 592 234 39 39 chr20 13784265 13784419 -52883586 - L2 LINE L2 -557 2757 2604 2035 117 7 3 chr20 13784495 13784793 -52883212 - AluSx SINE Alu -13 299 1 608 263 122 33 chr20 13784891 13785104 -52882901 + MIR SINE MIR 30 261 -1 2108 113 10 13 chr20 13785275 13785586 -52882419 + AluSq SINE Alu 4 313 0 1948 212 101 0 chr20 13785885 13786370 -52881635 + MLT1F LTR MaLR 1 534 -8 2234 92 0 33 chr20 13786788 13787091 -52880914 - AluSq SINE Alu -20 293 1 2321 90 0 0 chr20 13787136 13787424 -52880581 - AluSg SINE Alu -21 289 2 26 0 0 0 chr20 13787424 13787450 -52880555 + AT_rich Low_complexity Low_complexity 1 26 0 1877 156 10 7 chr20 13787463 13787764 -52880241 - AluSx SINE Alu -10 302 1 2360 85 9 28 chr20 13789138 13789455 -52878550 - AluSq SINE Alu -2 311 1 539 144 10 0 chr20 13789506 13789603 -52878402 - Charlie1 DNA MER1_type -5 2756 2659 629 168 7 88 chr20 13790224 13790361 -52877644 - FLAM_A SINE Alu -7 126 1 200 194 0 0 chr20 13790795 13790831 -52877174 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 1994 124 7 7 chr20 13791019 13791317 -52876688 + AluSx SINE Alu 1 298 -14 2233 81 3 10 chr20 13791329 13791627 -52876378 - AluSx SINE Alu -16 296 1 1695 158 0 50 chr20 13792161 13792313 -52875692 + AluSx SINE Alu 1 159 -153 2331 87 0 35 chr20 13792313 13792625 -52875380 + AluSg SINE Alu 1 301 -9 2175 112 3 10 chr20 13792628 13792931 -52875074 + AluSg SINE Alu 1 301 -9 1695 158 0 50 chr20 13792931 13793077 -52874928 + AluSx SINE Alu 161 288 -24 1880 99 0 25 chr20 13793124 13793408 -52874597 - AluSc SINE Alu -31 278 2 669 194 25 50 chr20 13793430 13793590 -52874415 - AluSp SINE Alu -21 292 137 270 168 126 21 chr20 13793685 13793780 -52874225 - L1ME4a LINE L1 -3 6118 6014 2183 122 0 0 chr20 13793799 13794094 -52873911 - AluSx SINE Alu -17 295 1 1951 92 96 4 chr20 13794153 13794425 -52873580 - AluSg SINE Alu -13 297 1 2366 90 0 10 chr20 13794824 13795135 -52872870 + AluSc SINE Alu 1 308 -1 1918 113 35 7 chr20 13795134 13795417 -52872588 + AluSg1 SINE Alu 1 291 -18 * 682 163 101 23 chr20 13795516 13795645 -52872360 + FLAM_C SINE Alu 2 140 -3 2213 127 0 3 chr20 13796277 13796584 -52871421 + AluSx SINE Alu 1 306 -6 1823 154 28 3 chr20 13796661 13796946 -52871059 - AluJb SINE Alu -20 292 1 2426 59 3 0 chr20 13797002 13797291 -52870714 + AluY SINE Alu 1 290 -21 1818 159 7 17 chr20 13797510 13797806 -52870199 + AluJb SINE Alu 1 293 -19 234 225 42 0 chr20 13797888 13797959 -52870046 - L1MC5 LINE L1 -279 7682 7609 1871 163 0 10 chr20 13797970 13798270 -52869735 + AluJb SINE Alu 5 301 -11 465 172 18 31 chr20 13798309 13798423 -52869582 + L1MC1 LINE L1 5835 5951 -382 2396 100 0 0 chr20 13798433 13798733 -52869272 - AluSx SINE Alu -12 300 1 1795 182 53 50 chr20 13798771 13798800 -52869205 - L1M LINE L1 -784 5362 5335 1726 133 0 65 chr20 13798800 13799079 -52868926 - AluJb SINE Alu -17 295 35 1795 182 53 50 chr20 13799079 13799173 -52868832 - L1M LINE L1 -811 5335 5243 2206 98 40 0 chr20 13799173 13799469 -52868536 - AluSx SINE Alu -4 308 1 1795 182 53 50 chr20 13799469 13799870 -52868135 - L1M LINE L1 -903 5243 4844 1667 173 16 39 chr20 13799964 13800148 -52867857 - AluJo SINE Alu -7 305 129 4547 78 62 51 chr20 13800148 13800855 -52867150 - SVA Other Other 0 1386 672 1667 173 16 39 chr20 13800855 13800982 -52867023 - AluJo SINE Alu -183 129 1 1752 181 13 3 chr20 13801109 13801408 -52866597 - AluJo SINE Alu -10 302 1 608 200 0 0 chr20 13801514 13801619 -52866386 - FRAM SINE Alu -13 163 59 1366 213 142 12 chr20 13802019 13802430 -52865575 - L1ME LINE L1 -460 5704 5243 318 115 0 0 chr20 13802856 13802908 -52865097 + (CA)n Simple_repeat Simple_repeat 2 53 0 2308 82 3 0 chr20 13804199 13804493 -52863512 + AluSx SINE Alu 1 295 -17 180 0 0 0 chr20 13804668 13804688 -52863317 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 2234 111 0 0 chr20 13804693 13804991 -52863014 - AluSx SINE Alu -14 298 1 1852 167 86 3 chr20 13804991 13805339 -52862666 - L1MB2 LINE L1 -40 6131 5755 2330 84 0 7 chr20 13805344 13805641 -52862364 - AluY SINE Alu -16 295 1 2221 105 3 0 chr20 13805646 13805942 -52862063 - AluSx SINE Alu -15 297 1 1063 211 64 0 chr20 13805965 13806231 -52861774 - L1M4 LINE L1 -3229 2917 2635 1194 196 55 115 chr20 13806236 13806479 -52861526 - MLT1A1 LTR MaLR -4 361 148 2217 117 7 0 chr20 13806479 13806778 -52861227 - AluSx SINE Alu -11 301 1 1194 196 55 115 chr20 13806778 13806917 -52861088 - MLT1A1 LTR MaLR -217 148 2 2854 177 39 52 chr20 13806923 13806972 -52861033 - MLT1A1-int LTR MaLR -5 1730 1682 1912 139 3 20 chr20 13806972 13807275 -52860730 + AluSx SINE Alu 4 301 -11 2854 177 39 52 chr20 13807275 13807823 -52860182 - MLT1A1-int LTR MaLR -53 1682 1141 2270 78 7 3 chr20 13807874 13808158 -52859847 - AluY SINE Alu -24 287 3 890 191 25 0 chr20 13808158 13808315 -52859690 - FRAM SINE Alu -14 162 2 1846 141 7 30 chr20 13808471 13808611 -52859394 + AluSx SINE Alu 3 145 -167 2297 103 0 31 chr20 13808611 13808932 -52859073 + AluSx SINE Alu 1 311 -1 1846 141 7 30 chr20 13808932 13809096 -52858909 + AluSx SINE Alu 145 300 -12 208 216 38 81 chr20 13809540 13809725 -52858280 + T-rich Low_complexity Low_complexity 3 179 0 800 86 0 71 chr20 13809909 13810049 -52857956 - AluSg SINE Alu -180 130 1 23 0 0 0 chr20 13810061 13810084 -52857921 + AT_rich Low_complexity Low_complexity 1 23 0 809 171 8 0 chr20 13810134 13810257 -52857748 - FLAM_C SINE Alu -18 125 2 2384 93 0 0 chr20 13810915 13811217 -52856788 - AluSc SINE Alu -7 302 1 1312 127 10 15 chr20 13811696 13811893 -52856112 + AluJo SINE Alu 1 196 -116 1386 178 0 0 chr20 13811961 13812192 -52855813 - AluJb SINE Alu 0 312 82 2201 99 3 3 chr20 13812299 13812591 -52855414 - AluSq SINE Alu -21 292 1 25 0 0 0 chr20 13812600 13812625 -52855380 + AT_rich Low_complexity Low_complexity 1 25 0 2116 135 0 0 chr20 13812649 13812946 -52855059 - AluSx SINE Alu -15 297 1 2051 115 17 0 chr20 13813018 13813306 -52854699 - AluSx SINE Alu -19 293 1 2254 110 0 0 chr20 13813708 13814009 -52853996 - AluSx SINE Alu -9 303 3 809 157 67 112 chr20 13814028 13814251 -52853754 + MER20 DNA MER1_type 2 214 -5 2291 96 3 7 chr20 13814372 13814702 -52853303 + AluSx SINE Alu 1 312 0 903 322 128 5 chr20 13814764 13815289 -52852716 - L2 LINE L2 -27 3286 2700 535 107 12 0 chr20 13815293 13815377 -52852628 + L1PA16 LINE L1 6082 6166 0 1735 148 0 30 chr20 13815446 13815716 -52852289 + AluJb SINE Alu 1 262 -50 27 0 0 0 chr20 13815849 13815876 -52852129 + AT_rich Low_complexity Low_complexity 1 27 0 2061 89 0 0 chr20 13816198 13816457 -52851548 - AluSx SINE Alu -19 293 35 185 347 173 0 chr20 13816649 13816724 -52851281 - L2 LINE L2 -45 3227 3140 449 266 26 0 chr20 13817166 13817279 -52850726 - L2 LINE L2 -9 3304 3189 15146 62 8 21 chr20 13817953 13820021 -52847984 + L1P LINE L1 2541 4581 -1565 814 300 78 63 chr20 13821004 13821560 -52846445 + L2 LINE L2 2456 3022 -291 465 286 126 17 chr20 13821895 13822133 -52845872 - L2 LINE L2 0 3313 3050 2857 143 14 14 chr20 13822304 13822730 -52845275 + MSTC LTR MaLR 1 426 -2 1842 138 3 7 chr20 13822854 13823162 -52844843 - AluJb SINE Alu 0 307 1 7278 112 33 9 chr20 13824543 13826199 -52841806 - L1PBa LINE L1 -4390 2473 634 1083 177 5 5 chr20 13826199 13826397 -52841608 - L1PBa LINE L1 -6663 200 3 1570 137 0 0 chr20 13826607 13826834 -52841171 + AluSg/x SINE Alu 78 304 -8 24 53 0 0 chr20 13828401 13828439 -52839566 + AT_rich Low_complexity Low_complexity 1 38 0 790 145 102 81 chr20 13828825 13829011 -52838994 + MER46A DNA MER2_type 47 236 0 1045 176 33 66 chr20 13829997 13830241 -52837764 + MER46A DNA MER2_type 1 236 0 360 251 17 95 chr20 13830256 13830435 -52837570 + L2 LINE L2 2611 2775 -539 393 176 14 0 chr20 13833579 13833653 -52834352 + MER116 DNA Mariner 6 80 0 2237 156 8 20 chr20 13834231 13834621 -52833384 - MER101B LTR ERV1 0 570 186 351 188 0 0 chr20 13834642 13834706 -52833299 + MER31-int LTR ERV1 1743 1806 -3130 1672 155 26 40 chr20 13834716 13835020 -52832985 + MER101B LTR ERV1 8 307 -263 203 173 56 67 chr20 13835169 13835348 -52832657 + (TTGTG)n Simple_repeat Simple_repeat 4 180 0 3490 146 22 22 chr20 13835565 13836161 -52831844 - MER54A LTR ERVL -305 596 1 296 263 10 30 chr20 13836163 13836262 -52831743 + L2 LINE L2 3006 3102 -170 21 36 0 0 chr20 13836661 13836689 -52831316 + AT_rich Low_complexity Low_complexity 1 28 0 224 321 12 0 chr20 13836818 13836902 -52831103 + L2 LINE L2 2976 3060 -212 12578 21 6 0 chr20 13837631 13839764 -52828241 + L1PA3 LINE L1 3999 6140 -15 2597 98 81 39 chr20 13839871 13840053 -52827952 + MSTA LTR MaLR 3 176 -252 1477 150 0 0 chr20 13840053 13840266 -52827739 + AluSg/x SINE Alu 86 298 -12 2597 98 81 39 chr20 13840266 13840491 -52827514 + MSTA LTR MaLR 176 427 -1 1964 149 3 0 chr20 13840801 13841097 -52826908 - AluSx SINE Alu -14 298 2 193 388 44 19 chr20 13841115 13841275 -52826730 + L2 LINE L2 2886 3049 -223 3247 199 88 26 chr20 13842312 13843500 -52824505 - L1MC4 LINE L1 -20 6146 4902 830 201 26 53 chr20 13843500 13843524 -52824481 + Charlie2 DNA MER1_type 2605 2628 -234 1822 137 6 78 chr20 13843524 13843846 -52824159 + AluSx SINE Alu 1 299 -13 830 201 26 53 chr20 13843846 13844085 -52823920 + Charlie2 DNA MER1_type 2628 2861 -1 483 279 13 32 chr20 13844521 13844675 -52823330 + MIR SINE MIR 4 154 -108 538 207 77 30 chr20 13844841 13845010 -52822995 - LTR37B LTR ERV1 -5 463 287 198 240 80 70 chr20 13845656 13845756 -52822249 - L3 LINE CR1 -1044 533 433 26 0 0 0 chr20 13846048 13846074 -52821931 + AT_rich Low_complexity Low_complexity 1 26 0 240 250 10 20 chr20 13847901 13848001 -52820004 + L1MB7 LINE L1 5032 5130 -1016 2666 196 62 44 chr20 13848039 13848878 -52819127 + L1MB7 LINE L1 5319 6172 -12 824 211 30 111 chr20 13849030 13849400 -52818605 - MLT1A2 LTR MaLR -11 363 24 1590 163 35 54 chr20 13849872 13850240 -52817765 - THE1C LTR MaLR 0 375 15 464 185 13 60 chr20 13850417 13850568 -52817437 - L1M4 LINE L1 -1120 5026 4883 1725 144 0 8 chr20 13850583 13850833 -52817172 - AluSq SINE Alu -65 248 1 1155 167 26 4 chr20 13850868 13851096 -52816909 - MLT1D LTR MaLR 0 505 273 1472 259 30 26 chr20 13851096 13851556 -52816449 + MLT1C LTR MaLR 3 464 -3 316 246 27 36 chr20 13851567 13851677 -52816328 - MLT1D LTR MaLR -338 288 180 2275 78 7 32 chr20 13851677 13851986 -52816019 - AluSg SINE Alu -9 301 1 606 151 109 0 chr20 13852027 13852146 -52815859 + AluJb SINE Alu 1 132 -180 735 221 13 25 chr20 13852409 13852567 -52815438 - AluJo/FRAM SINE Alu -10 292 137 1184 68 31 144 chr20 13852570 13852792 -52815213 - AluYb8 SINE Alu -4 314 118 267 295 19 0 chr20 13853611 13853716 -52814289 - L1M4 LINE L1 -3595 2551 2445 3246 136 74 10 chr20 13853751 13854369 -52813636 - L1MA9 LINE L1 -1 6311 5654 295 260 67 31 chr20 13854379 13854602 -52813403 - L1M4 LINE L1 -3679 2467 2237 376 194 36 0 chr20 13854629 13854890 -52813115 + (TA)n Simple_repeat Simple_repeat 1 270 0 1515 162 3 91 chr20 13855106 13855415 -52812590 - AluJo SINE Alu -30 282 1 41 36 0 0 chr20 13856066 13856121 -52811884 + AT_rich Low_complexity Low_complexity 1 55 0 494 190 26 9 chr20 13856121 13856237 -52811768 - L1PA11 LINE L1 -2 6172 6055 4967 85 16 13 chr20 13856239 13857098 -52810907 - L1PA11 LINE L1 -118 6013 5153 * 8250 111 11 2 chr20 13857095 13858409 -52809596 + L1P LINE L1 2925 4249 -1897 1065 86 0 0 chr20 13858409 13858537 -52809468 + AluSq/x SINE Alu 1 128 -185 437 17 0 34 chr20 13858537 13858596 -52809409 + (TAA)n Simple_repeat Simple_repeat 2 58 0 5837 158 11 9 chr20 13862220 13864328 -52803677 + L1PB1 LINE L1 3982 6097 -54 2206 110 3 7 chr20 13864328 13864628 -52803377 + AluSg SINE Alu 1 299 -11 5837 158 11 9 chr20 13864628 13864684 -52803321 + L1PB1 LINE L1 6097 6151 0 22 0 0 0 chr20 13864684 13864706 -52803299 + AT_rich Low_complexity Low_complexity 1 22 0 274 222 0 62 chr20 13866050 13866131 -52801874 - AluJ/FLAM SINE Alu -224 78 3 1345 102 122 0 chr20 13866212 13866417 -52801588 + MER30 DNA MER1_type 1 230 0 684 120 45 0 chr20 13867368 13867501 -52800504 + L1MA5 LINE L1 6159 6297 -3 863 154 0 0 chr20 13868415 13868538 -52799467 + FLAM_C SINE Alu 1 123 -20 2001 134 21 0 chr20 13869285 13869569 -52798436 - AluSx SINE Alu -22 290 1 5358 130 13 15 chr20 13869570 13870722 -52797283 + L1M1 LINE L1 4317 5466 -839 1883 141 0 0 chr20 13870722 13871025 -52796980 + AluSx SINE Alu 14 316 0 5358 130 13 15 chr20 13871025 13871319 -52796686 + L1M1 LINE L1 5466 5759 -546 506 257 56 67 chr20 13871312 13871483 -52796522 + HAL1 LINE L1 1842 2009 -498 * 2481 78 0 0 chr20 13871483 13871792 -52796213 + AluSc SINE Alu 1 309 0 506 257 56 67 chr20 13871792 13871962 -52796043 + HAL1 LINE L1 2009 2179 -328 4072 149 21 32 chr20 13871965 13872247 -52795758 + L1PA16 LINE L1 5409 5692 -474 2327 123 0 0 chr20 13872247 13872557 -52795448 + AluSx SINE Alu 1 310 -2 1802 96 28 99 chr20 13872563 13872885 -52795120 + AluSx SINE Alu 13 311 -1 4072 149 21 32 chr20 13872885 13873352 -52794653 + L1PA16 LINE L1 5697 6157 -9 943 173 103 130 chr20 13873454 13873755 -52794250 + AluSx SINE Alu 2 294 -8 31 36 0 18 chr20 13873819 13873857 -52794148 + AT_rich Low_complexity Low_complexity 1 39 -16 1720 144 7 14 chr20 13873857 13874142 -52793863 + AluSq SINE Alu 1 283 -30 31 36 0 18 chr20 13874142 13874159 -52793846 + AT_rich Low_complexity Low_complexity 39 55 0 964 252 16 28 chr20 13875056 13875452 -52792553 - LTR16A LTR ERVL -4 446 25 273 57 0 0 chr20 13876055 13876090 -52791915 + (GA)n Simple_repeat Simple_repeat 2 36 0 704 250 165 0 chr20 13876090 13876290 -52791715 - MIR SINE MIR -20 242 10 1319 151 158 26 chr20 13877277 13877549 -52790456 - AluJo SINE Alu 0 312 5 460 351 93 32 chr20 13879461 13879946 -52788059 + L2 LINE L2 2601 3112 -160 442 271 104 35 chr20 13880837 13880981 -52787024 + MIR SINE MIR 5 158 -104 196 256 33 89 chr20 13881521 13881611 -52786394 + MIR SINE MIR 20 104 -158 183 346 59 10 chr20 13881923 13882024 -52785981 - MIR SINE MIR 0 262 157 3941 71 17 54 chr20 13884415 13885118 -52782887 + L1P LINE L1 1 677 -5469 32 43 0 0 chr20 13885670 13885716 -52782289 + AT_rich Low_complexity Low_complexity 1 46 0 214 225 43 43 chr20 13886927 13887065 -52780940 + (TTATA)n Simple_repeat Simple_repeat 5 142 0 1733 122 17 24 chr20 13887139 13887448 -52780557 - AluSx SINE Alu 0 312 13 303 312 187 21 chr20 13887843 13888180 -52779825 + L1M4 LINE L1 2110 2502 -3644 33 0 0 0 chr20 13889779 13889812 -52778193 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr20 13890375 13890405 -52777600 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr20 13891320 13891357 -52776648 + AT_rich Low_complexity Low_complexity 1 37 0 24 53 0 0 chr20 13891473 13891511 -52776494 + AT_rich Low_complexity Low_complexity 1 38 0 2282 82 10 3 chr20 13893403 13893706 -52774299 - AluSp SINE Alu -8 305 1 313 231 75 52 chr20 13893851 13893985 -52774020 + L1MC4 LINE L1 7626 7762 -280 2084 125 10 13 chr20 13893985 13894297 -52773708 + AluSx SINE Alu 1 311 -1 1126 163 0 0 chr20 13894297 13894475 -52773530 + AluSg/x SINE Alu 134 311 -1 748 116 99 25 chr20 13895470 13895591 -52772414 + FLAM_C SINE Alu 1 130 -3 1459 196 31 0 chr20 13895624 13895879 -52772126 + AluJo SINE Alu 1 263 -49 2144 112 0 59 chr20 13896261 13896583 -52771422 + AluSg SINE Alu 1 303 -7 2113 116 3 0 chr20 13896592 13896885 -52771120 + AluSg SINE Alu 1 294 -16 223 240 83 52 chr20 13896916 13897012 -52770993 - L2 LINE L2 -213 3059 2961 1943 95 44 0 chr20 13897185 13897458 -52770547 + AluSg SINE Alu 1 285 -25 21 36 0 0 chr20 13897612 13897640 -52770365 + AT_rich Low_complexity Low_complexity 1 28 0 729 250 119 17 chr20 13897874 13898110 -52769895 + MIR SINE MIR 3 262 0 199 274 60 0 chr20 13899889 13899964 -52768041 - MIR SINE MIR -76 132 48 271 229 18 64 chr20 13900097 13900206 -52767799 - L1MC4 LINE L1 0 8042 7939 180 204 19 148 chr20 13900536 13900644 -52767361 + L2 LINE L2 2930 3023 -249 2353 63 0 0 chr20 13900757 13901059 -52766946 - AluY SINE Alu -9 302 1 1182 165 119 4 chr20 13901069 13901305 -52766700 - L1MC1 LINE L1 -1 6332 6070 404 136 0 0 chr20 13901308 13901367 -52766638 - AluS SINE Alu -243 60 2 2679 136 83 42 chr20 13901369 13901595 -52766410 - L1MC1 LINE L1 -439 5894 5679 2362 74 0 0 chr20 13901595 13901906 -52766099 - AluY SINE Alu 0 311 1 2679 136 83 42 chr20 13901906 13902231 -52765774 - L1MC1 LINE L1 -654 5679 5320 1281 179 74 54 chr20 13902231 13902485 -52765520 - AluJo SINE Alu 0 302 55 270 0 0 0 chr20 13902485 13902515 -52765490 + (TA)n Simple_repeat Simple_repeat 2 31 0 2337 79 3 0 chr20 13902515 13902819 -52765186 - AluSg SINE Alu -5 305 1 1281 179 74 54 chr20 13902819 13902859 -52765146 - AluJo SINE Alu -246 56 1 434 185 50 50 chr20 13902868 13902987 -52765018 - AluJb SINE Alu -15 297 179 207 203 0 0 chr20 13902991 13903055 -52764950 + T-rich Low_complexity Low_complexity 1 64 0 1534 103 0 93 chr20 13903092 13903278 -52764727 - L1MA4 LINE L1 -1 6299 6097 1841 162 7 0 chr20 13903278 13903575 -52764430 + AluJb SINE Alu 1 299 -13 1688 133 47 33 chr20 13903575 13903875 -52764130 + AluSx SINE Alu 1 304 -8 1534 103 0 93 chr20 13903875 13903989 -52764016 - L1MA4 LINE L1 -201 6099 6026 3375 63 2 20 chr20 13904015 13904387 -52763618 - L1PA6 LINE L1 -6 6148 5784 1608 106 147 23 chr20 13904387 13904652 -52763353 - AluSp SINE Alu -3 300 3 3375 63 2 20 chr20 13904652 13904724 -52763281 - L1PA6 LINE L1 -370 5784 5712 713 163 23 31 chr20 13905045 13905174 -52762831 - FLAM_C SINE Alu -4 129 2 2032 108 3 13 chr20 13905262 13905567 -52762438 + AluSx SINE Alu 1 302 -10 1020 85 7 0 chr20 13905734 13905875 -52762130 - AluSg/x SINE Alu -10 302 161 1131 113 6 17 chr20 13905877 13906079 -52761926 + AluSg/x SINE Alu 111 310 0 1364 143 27 61 chr20 13906133 13906427 -52761578 + AluJo SINE Alu 14 297 -15 942 102 0 0 chr20 13906657 13906784 -52761221 + AluSq/x SINE Alu 7 133 -180 27 0 0 0 chr20 13906794 13906821 -52761184 + AT_rich Low_complexity Low_complexity 1 27 0 350 200 96 3 chr20 13906822 13906962 -52761043 - MER5A DNA MER1_type 0 189 3 1829 149 0 0 chr20 13907030 13907312 -52760693 + AluSx SINE Alu 1 282 -30 322 254 35 0 chr20 13907353 13907467 -52760538 + L1MC4 LINE L1 7116 7233 -809 506 273 172 33 chr20 13907495 13907884 -52760121 + L1MC4a LINE L1 7263 7705 -103 709 160 76 0 chr20 13907937 13908056 -52759949 - AluJo SINE Alu -161 151 24 632 126 0 0 chr20 13908061 13908156 -52759849 + AluJ/FLAM SINE Alu 6 100 -212 901 113 0 0 chr20 13908309 13908442 -52759563 + MER50 LTR ERV1 542 674 -60 2269 92 13 0 chr20 13908513 13908818 -52759187 + AluSg SINE Alu 1 309 -1 2070 108 7 0 chr20 13908845 13909141 -52758864 + AluSx SINE Alu 1 298 -14 1610 134 5 13 chr20 13909141 13909501 -52758504 - MER51A LTR ERV1 -117 517 1 1561 143 0 70 chr20 13909780 13910081 -52757924 - AluJo SINE Alu -6 306 27 830 130 0 0 chr20 13910084 13910207 -52757798 - AluJo/FLAM SINE Alu -179 133 11 1459 191 35 0 chr20 13910333 13910616 -52757389 - AluJb SINE Alu -19 293 1 2061 96 36 3 chr20 13910724 13911026 -52756979 + AluSp SINE Alu 1 312 -1 2004 91 34 17 chr20 13911028 13911324 -52756681 + AluY SINE Alu 1 301 -10 2224 82 0 3 chr20 13911428 13911722 -52756283 - AluY SINE Alu -18 293 1 4625 92 152 32 chr20 13911799 13912537 -52755468 + LTR12 LTR ERV1 1 826 0 1988 122 0 7 chr20 13912883 13913186 -52754819 + AluY SINE Alu 1 301 -10 1229 194 43 36 chr20 13913242 13913521 -52754484 + AluJo SINE Alu 2 282 -30 2175 91 3 7 chr20 13913794 13914102 -52753903 + AluSx SINE Alu 1 307 -5 2059 89 31 3 chr20 13914376 13914667 -52753338 + AluY SINE Alu 1 299 -12 2242 91 7 3 chr20 13914971 13915280 -52752725 + AluSx SINE Alu 1 310 -2 1695 178 78 0 chr20 13915366 13915687 -52752318 - MER7A DNA MER2_type -1 345 2 257 277 50 0 chr20 13915986 13916105 -52751900 + HAL1 LINE L1 2250 2374 -133 1752 101 36 11 chr20 13917181 13917457 -52750548 - AluSg SINE Alu -16 294 12 2204 62 3 45 chr20 13917500 13917809 -52750196 + AluY SINE Alu 1 296 -15 238 160 180 0 chr20 13917811 13917861 -52750144 + L2 LINE L2 3255 3313 0 839 183 0 0 chr20 13917983 13918120 -52749885 + AluJo SINE Alu 3 139 -173 423 134 256 0 chr20 13918113 13918153 -52749852 - AluJo SINE Alu -126 186 157 * 305 24 24 0 chr20 13918153 13918195 -52749810 + (TA)n Simple_repeat Simple_repeat 2 44 0 423 134 256 0 chr20 13918195 13918236 -52749769 - AluJo SINE Alu -155 157 84 647 158 0 0 chr20 13918244 13918345 -52749660 + U13 snRNA snRNA 4 104 0 572 174 0 0 chr20 13918388 13918480 -52749525 + AluSg/x SINE Alu 201 292 -17 1593 82 222 0 chr20 13919442 13919685 -52748320 - AluY SINE Alu -2 299 3 1984 123 3 20 chr20 13920105 13920406 -52747599 + AluSx SINE Alu 6 301 -11 876 230 32 68 chr20 13920723 13921064 -52746941 + LTR47B LTR ERVL 123 443 0 2435 75 0 0 chr20 13921096 13921403 -52746602 + AluY SINE Alu 1 307 -4 1965 125 10 13 chr20 13921612 13921924 -52746081 + AluSx SINE Alu 1 311 -1 1074 163 0 0 chr20 13921924 13922102 -52745903 + AluSg/x SINE Alu 132 309 -1 755 116 99 25 chr20 13923097 13923218 -52744787 + FLAM_C SINE Alu 1 130 -3 1356 196 31 0 chr20 13923251 13923506 -52744499 + AluJo SINE Alu 1 263 -49 2026 112 0 59 chr20 13923888 13924210 -52743795 + AluSg SINE Alu 1 303 -7 2084 119 3 0 chr20 13924219 13924512 -52743493 + AluSg SINE Alu 1 294 -16 223 240 83 52 chr20 13924543 13924639 -52743366 - L2 LINE L2 -213 3059 2961 1979 91 44 0 chr20 13924812 13925086 -52742919 + AluSg SINE Alu 1 286 -24 21 36 0 0 chr20 13925239 13925267 -52742738 + AT_rich Low_complexity Low_complexity 1 28 0 715 251 123 17 chr20 13925501 13925736 -52742269 + MIR SINE MIR 3 262 0 189 307 133 0 chr20 13927515 13927590 -52740415 - MIR SINE MIR -76 132 48 232 246 0 15 chr20 13928185 13928250 -52739755 + CT-rich Low_complexity Low_complexity 2 65 0 1640 116 7 38 chr20 13928251 13928543 -52739462 + AluSq SINE Alu 16 298 -15 615 164 64 18 chr20 13928735 13928845 -52739160 + FLAM_C SINE Alu 11 125 -18 1834 123 16 32 chr20 13928941 13929250 -52738755 + AluSq SINE Alu 1 304 -9 2107 86 7 0 chr20 13929254 13929546 -52738459 + AluSp SINE Alu 1 294 -19 1384 150 20 158 chr20 13929562 13929726 -52738279 + AluJb SINE Alu 1 95 -207 2407 65 0 3 chr20 13929726 13930032 -52737973 + AluY SINE Alu 1 305 -6 1384 150 20 158 chr20 13930032 13930208 -52737797 + AluJb SINE Alu 95 294 -8 1913 118 13 7 chr20 13930208 13930514 -52737491 + AluSx SINE Alu 1 308 -4 2298 97 0 0 chr20 13930518 13930829 -52737176 + AluY SINE Alu 1 311 0 1989 136 0 3 chr20 13930832 13931142 -52736863 + AluSg1 SINE Alu 1 309 0 1503 161 7 40 chr20 13931146 13931444 -52736561 + AluJo SINE Alu 1 288 -24 327 227 86 21 chr20 13931625 13931755 -52736250 - L1MCa LINE L1 -1339 6983 1986 1005 85 0 0 chr20 13931939 13932068 -52735937 + AluSx SINE Alu 7 135 -177 1926 131 7 7 chr20 13932069 13932360 -52735645 + AluSx SINE Alu 1 291 -21 21 0 0 0 chr20 13932364 13932385 -52735620 + AT_rich Low_complexity Low_complexity 1 21 0 1045 160 21 0 chr20 13932387 13932575 -52735430 + AluSx SINE Alu 118 309 -1 1643 124 0 81 chr20 13933640 13933866 -52734139 - L1MC1 LINE L1 -15 6318 6122 1636 174 3 0 chr20 13933866 13934148 -52733857 - AluJo SINE Alu -20 292 10 1643 124 0 81 chr20 13934148 13934228 -52733777 - L1MC1 LINE L1 -211 6122 6037 371 306 56 28 chr20 13934244 13934388 -52733617 - L2 LINE L2 -1 3312 3165 312 283 33 11 chr20 13934516 13934608 -52733397 - MER5A DNA MER1_type 0 189 96 828 114 30 30 chr20 13934608 13934740 -52733265 + FLAM_C SINE Alu 1 132 -1 1825 103 0 12 chr20 13934751 13935003 -52733002 + AluSx SINE Alu 56 304 -8 1039 141 179 88 chr20 13935192 13935532 -52732473 - MER93b LTR ERV1 -2 371 1 2357 88 3 0 chr20 13935583 13935891 -52732114 - AluSx SINE Alu -3 309 1 2975 106 49 33 chr20 13935919 13936248 -52731757 + LOR1a LTR ERV1 1 343 -154 1734 149 14 3 chr20 13936248 13936551 -52731454 + AluJb SINE Alu 1 306 0 2975 106 49 33 chr20 13936551 13936709 -52731296 + LOR1a LTR ERV1 343 497 0 1467 169 10 42 chr20 13936767 13937074 -52730931 - AluJo SINE Alu -11 301 5 1253 126 70 0 chr20 13937220 13937419 -52730586 + AluSg/x SINE Alu 82 294 -18 2401 56 7 0 chr20 13937509 13937812 -52730193 + AluY SINE Alu 1 305 -6 25 0 0 0 chr20 13937888 13937913 -52730092 + AT_rich Low_complexity Low_complexity 1 25 0 2389 35 0 0 chr20 13937913 13938195 -52729810 - L1PA4 LINE L1 -3 6152 5871 2089 113 0 7 chr20 13939063 13939363 -52728642 - AluSx SINE Alu -14 298 1 674 125 0 0 chr20 13939363 13939459 -52728546 + Tigger5 DNA MER2_type 2228 2323 0 1489 163 17 17 chr20 13939511 13939799 -52728206 + AluJb SINE Alu 24 311 -1 1325 183 9 105 chr20 13940368 13940500 -52727505 + AluJo SINE Alu 1 144 -158 2194 81 11 0 chr20 13940500 13940785 -52727220 - AluSp SINE Alu -25 288 1 1325 183 9 105 chr20 13940785 13940985 -52727020 + AluJo SINE Alu 144 301 -1 616 171 193 35 chr20 13941127 13941355 -52726650 - MER33 DNA MER1_type -2 322 59 1172 162 59 0 chr20 13941356 13941560 -52726445 + AluJb SINE Alu 78 293 -19 751 168 154 0 chr20 13941631 13941780 -52726225 + MER3 DNA MER1_type 14 185 -24 2073 97 37 3 chr20 13941780 13942078 -52725927 + AluSx SINE Alu 5 312 0 1305 181 68 32 chr20 13942095 13942376 -52725629 - AluJo SINE Alu -11 291 1 485 202 10 0 chr20 13942376 13942475 -52725530 + L1ME2 LINE L1 6038 6137 -27 267 270 0 0 chr20 13942522 13942611 -52725394 - L1MC4 LINE L1 -1339 6703 6615 2210 99 3 0 chr20 13942611 13942913 -52725092 - AluSp SINE Alu -10 303 1 235 265 0 20 chr20 13942913 13942929 -52725076 + L1MC4 LINE L1 6694 6709 -1333 231 143 0 0 chr20 13943020 13943055 -52724950 + AluJb SINE Alu 59 93 -73 636 245 7 14 chr20 13943059 13943198 -52724807 - AluJo SINE Alu -141 171 34 253 289 78 72 chr20 13943385 13943551 -52724454 + L2 LINE L2 2997 3163 -150 1045 174 9 19 chr20 13943638 13943850 -52724155 + AluJb SINE Alu 100 309 -3 22 0 0 0 chr20 13944037 13944059 -52723946 + AT_rich Low_complexity Low_complexity 1 22 0 2419 54 0 0 chr20 13944201 13944497 -52723508 - AluY SINE Alu -15 296 1 2113 82 0 39 chr20 13944824 13945130 -52722875 - AluSx SINE Alu -18 294 1 719 212 127 12 chr20 13945171 13945452 -52722553 - MER58 DNA MER1_type 0 2420 19 351 294 71 22 chr20 13945702 13945886 -52722119 - MIR SINE MIR -24 238 46 2415 71 3 3 chr20 13947061 13947356 -52720649 + AluSx SINE Alu 2 296 -16 2022 100 4 12 chr20 13947356 13947670 -52720335 + AluSg SINE Alu 1 283 -27 1583 146 58 7 chr20 13947697 13947811 -52720194 + AluJo SINE Alu 9 116 -196 201 39 0 0 chr20 13947811 13947837 -52720168 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1583 146 58 7 chr20 13947837 13947997 -52720008 + AluJo SINE Alu 116 297 -15 998 102 0 0 chr20 13948225 13948352 -52719653 + AluSq/x SINE Alu 7 133 -179 27 0 0 0 chr20 13948362 13948389 -52719616 + AT_rich Low_complexity Low_complexity 1 27 0 230 141 109 31 chr20 13948460 13948524 -52719481 - MER5A DNA MER1_type -118 71 3 1948 149 0 0 chr20 13948592 13948874 -52719131 + AluSx SINE Alu 1 282 -30 327 254 35 0 chr20 13948915 13949029 -52718976 + L1MC4 LINE L1 7116 7233 -809 523 267 167 32 chr20 13949057 13949446 -52718559 + L1MC4a LINE L1 7263 7877 -118 703 160 76 0 chr20 13949501 13949620 -52718385 - AluJo SINE Alu -161 151 24 622 126 0 0 chr20 13949625 13949720 -52718285 + AluJ/FLAM SINE Alu 6 100 -212 903 113 0 0 chr20 13949873 13950006 -52717999 + MER50 LTR ERV1 542 674 -60 2440 85 13 0 chr20 13950077 13950383 -52717622 + AluSg SINE Alu 1 310 0 2193 108 7 0 chr20 13950410 13950706 -52717299 + AluSx SINE Alu 1 298 -14 1607 137 5 13 chr20 13950706 13951066 -52716939 - MER51A LTR ERV1 -117 517 1 1672 143 0 70 chr20 13951345 13951646 -52716359 - AluJo SINE Alu -6 306 27 881 123 8 0 chr20 13951650 13951772 -52716233 - FLAM_C SINE Alu -10 133 11 1568 191 35 0 chr20 13951899 13952182 -52715823 - AluJb SINE Alu -19 293 1 2199 97 37 0 chr20 13952290 13952589 -52715416 + AluSp SINE Alu 1 310 -3 2151 91 30 20 chr20 13952591 13952889 -52715116 + AluSc SINE Alu 1 301 -8 2376 78 0 3 chr20 13952993 13953287 -52714718 - AluY SINE Alu -18 293 1 4610 92 152 32 chr20 13953364 13954102 -52713903 + LTR12 LTR ERV1 1 826 0 2104 122 0 7 chr20 13954448 13954751 -52713254 + AluY SINE Alu 1 301 -10 1327 194 43 36 chr20 13954807 13955086 -52712919 + AluJo SINE Alu 2 282 -30 2273 94 3 7 chr20 13955359 13955667 -52712338 + AluSx SINE Alu 1 307 -5 2184 89 31 3 chr20 13955940 13956231 -52711774 + AluY SINE Alu 1 299 -12 2415 84 7 3 chr20 13956535 13956844 -52711161 + AluSx SINE Alu 1 310 -2 1709 178 78 0 chr20 13956930 13957251 -52710754 - MER7A DNA MER2_type -1 345 2 267 277 50 0 chr20 13957550 13957669 -52710336 + HAL1 LINE L1 2250 2374 -133 2146 102 32 0 chr20 13958745 13959030 -52708975 - AluSg SINE Alu -16 294 1 2379 61 0 45 chr20 13959059 13959369 -52708636 + AluY SINE Alu 1 296 -15 211 160 180 0 chr20 13959371 13959421 -52708584 + L2 LINE L2 3255 3313 0 814 194 0 0 chr20 13959541 13959680 -52708325 + AluJo SINE Alu 1 139 -173 356 147 280 0 chr20 13959680 13959713 -52708292 - AluJo SINE Alu -123 179 156 305 24 24 0 chr20 13959713 13959755 -52708250 + (TA)n Simple_repeat Simple_repeat 1 43 0 356 147 280 0 chr20 13959755 13959796 -52708209 - AluJo SINE Alu -146 156 84 649 158 0 0 chr20 13959804 13959905 -52708100 + U13 snRNA snRNA 4 104 0 580 163 0 0 chr20 13959948 13960040 -52707965 + AluSg/x SINE Alu 202 293 -17 23 0 0 0 chr20 13961098 13961121 -52706884 + AT_rich Low_complexity Low_complexity 1 23 0 201 39 0 0 chr20 13961912 13961938 -52706067 + (A)n Simple_repeat Simple_repeat 1 26 0 544 291 14 33 chr20 13963119 13963394 -52704611 - THE1C LTR MaLR -103 272 3 419 319 6 18 chr20 13964104 13964270 -52703735 + GA-rich Low_complexity Low_complexity 5 168 0 721 285 67 18 chr20 13965621 13965985 -52702020 + L1MC4a LINE L1 5499 5768 -394 38 39 0 0 chr20 13966048 13966100 -52701905 + AT_rich Low_complexity Low_complexity 1 52 0 1019 177 39 5 chr20 13966461 13966664 -52701341 + AluSq SINE Alu 1 210 -103 1731 130 59 0 chr20 13966979 13967218 -52700787 + AluJb SINE Alu 1 253 -59 327 281 18 30 chr20 13968132 13968299 -52699706 + GA-rich Low_complexity Low_complexity 3 167 0 239 220 22 44 chr20 13968614 13968705 -52699300 + L2 LINE L2 3142 3230 -42 361 339 0 8 chr20 13968837 13968955 -52699050 + L1MC/D LINE L1 5542 5658 -2150 1792 169 14 3 chr20 13969121 13969416 -52698589 + AluJb SINE Alu 1 298 -14 297 0 0 0 chr20 13970378 13970411 -52697594 + (TA)n Simple_repeat Simple_repeat 2 34 0 1208 186 4 38 chr20 13971836 13972099 -52695906 + AluJb SINE Alu 1 254 -58 511 165 0 52 chr20 13972501 13972598 -52695407 - MLT1C LTR MaLR -375 92 1 401 256 146 18 chr20 13972620 13972784 -52695221 + MIR SINE MIR 46 230 -32 516 259 30 6 chr20 13972805 13972971 -52695034 - L2 LINE L2 0 3313 3144 1591 158 40 14 chr20 13972973 13973251 -52694754 + AluJb SINE Alu 9 293 -19 2208 129 7 0 chr20 13974014 13974323 -52693682 + AluSx SINE Alu 1 311 -1 929 101 125 6 chr20 13974576 13974744 -52693261 - AluSg/x SINE Alu -11 299 112 221 266 8 28 chr20 13975372 13975462 -52692543 + GA-rich Low_complexity Low_complexity 1 88 0 1539 144 10 26 chr20 13977310 13977622 -52690383 - L1 LINE L1 -1417 4729 4423 1589 133 7 32 chr20 13977787 13978072 -52689933 + AluSx SINE Alu 35 312 0 694 100 37 227 chr20 13978074 13978280 -52689725 + MER45B DNA AcHobo 786 931 -650 396 226 137 0 chr20 13978280 13978382 -52689623 - FLAM_C SINE Alu -16 117 2 694 100 37 227 chr20 13978382 13978444 -52689561 + MER45B DNA AcHobo 931 1003 -37 210 71 0 0 chr20 13979294 13979322 -52688683 + (TTTC)n Simple_repeat Simple_repeat 4 31 0 213 39 0 0 chr20 13979463 13979489 -52688516 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 625 82 0 0 chr20 13980795 13980880 -52687125 - AluY SINE Alu -14 297 213 425 279 55 60 chr20 13981558 13981831 -52686174 - L1MC4a LINE L1 -428 5814 5675 2025 151 0 3 chr20 13981904 13982216 -52685789 + AluSx SINE Alu 1 311 -1 243 146 0 0 chr20 13982690 13982731 -52685274 + (T)n Simple_repeat Simple_repeat 1 41 0 197 319 14 0 chr20 14083645 14083714 -52584291 + MIR SINE MIR 180 249 -13 1634 237 74 9 chr20 14083883 14084330 -52583675 - L1ME3A LINE L1 -35 6135 5660 2325 106 0 0 chr20 14084616 14084917 -52583088 + AluSc SINE Alu 5 305 -4 297 384 81 34 chr20 14085183 14085506 -52582499 - L2 LINE L2 0 3272 2935 226 260 0 0 chr20 14085710 14085760 -52582245 + L1MC4 LINE L1 7630 7679 -363 3839 149 53 8 chr20 14085873 14086066 -52581939 - Tigger3b DNA MER2_type -2222 806 623 1851 135 4 0 chr20 14086066 14086345 -52581660 - AluSx SINE Alu 0 314 35 3839 149 53 8 chr20 14086345 14086920 -52581085 - Tigger3b DNA MER2_type -2405 623 2 1844 193 63 31 chr20 14086939 14087364 -52580641 - MLT2B1 LTR ERVL -78 442 4 3086 146 27 18 chr20 14088026 14088575 -52579430 + L1PB4 LINE L1 5592 6145 -11 213 119 0 0 chr20 14088576 14088618 -52579387 + (T)n Simple_repeat Simple_repeat 1 42 0 946 148 0 51 chr20 14088840 14089056 -52578949 + Tigger3b DNA MER2_type 1027 1231 0 406 241 14 164 chr20 14089558 14089783 -52578222 + MIR SINE MIR 7 182 -80 1962 117 3 17 chr20 14089783 14090109 -52577896 + AluSg SINE Alu 1 310 0 406 241 14 164 chr20 14090109 14090169 -52577836 + MIR SINE MIR 182 249 -13 435 343 101 32 chr20 14090362 14090869 -52577136 + LTR67 LTR ERVL 2 543 -14 182 263 0 70 chr20 14091408 14091465 -52576540 - L2 LINE L2 -5 3267 3215 544 303 80 11 chr20 14092024 14092212 -52575793 + MIR SINE MIR 5 205 -57 568 275 28 34 chr20 14092474 14092652 -52575353 + MIR SINE MIR 23 199 -63 1189 161 28 4 chr20 14092679 14092927 -52575078 + LTR65 LTR ERV1 1 254 -415 1249 189 23 12 chr20 14092965 14093224 -52574781 - MLT1E2 LTR MaLR -57 569 308 1666 207 22 56 chr20 14093225 14093669 -52574336 + LTR65 LTR ERV1 239 667 -2 23 33 0 0 chr20 14094160 14094190 -52573815 + AT_rich Low_complexity Low_complexity 1 30 0 216 0 0 0 chr20 14094611 14094635 -52573370 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr20 14095379 14095401 -52572604 + AT_rich Low_complexity Low_complexity 1 22 0 337 207 37 0 chr20 14095564 14095646 -52572359 - MIR SINE MIR -54 208 124 1140 106 0 0 chr20 14095680 14095831 -52572174 - AluSp/q SINE Alu -1 312 162 323 255 33 30 chr20 14095833 14095968 -52572037 - L1ME LINE L1 -509 5612 5476 967 153 37 161 chr20 14096107 14096485 -52571520 + LTR49 LTR ERV1 2 332 -263 418 209 15 124 chr20 14096548 14096736 -52571269 + LTR48 LTR ERV1 521 644 0 2062 105 0 14 chr20 14098469 14098780 -52569225 - AluSx SINE Alu 0 307 1 333 0 0 0 chr20 14099156 14099193 -52568812 + (CA)n Simple_repeat Simple_repeat 2 38 0 824 265 102 41 chr20 14099373 14099765 -52568240 - LTR16C LTR ERVL -10 481 66 331 265 23 53 chr20 14100194 14100326 -52567679 + MER77 LTR ERV1 66 193 -412 * 576 285 75 73 chr20 14100303 14100742 -52567263 + MER21B LTR ERV1 98 537 -326 374 0 0 21 chr20 14101439 14101486 -52566519 + (TG)n Simple_repeat Simple_repeat 2 47 0 702 171 44 13 chr20 14101530 14101688 -52566317 - L1ME3A LINE L1 0 6170 6008 1039 217 61 50 chr20 14102232 14102610 -52565395 + MER66A LTR ERV1 45 426 -52 2316 171 24 0 chr20 14104484 14104894 -52563111 + MSTA LTR MaLR 9 428 0 3215 154 11 0 chr20 14104894 14105459 -52562546 + MSTA-int LTR MaLR 1 571 -1080 3562 147 10 2 chr20 14105481 14106066 -52561939 + MSTA-int LTR MaLR 1062 1651 0 2136 177 39 0 chr20 14106071 14106478 -52561527 + MSTA LTR MaLR 6 428 0 502 316 93 9 chr20 14106679 14106894 -52561111 + MIR SINE MIR 20 252 -10 280 270 56 11 chr20 14107635 14107724 -52560281 + MIR SINE MIR 120 212 -50 521 306 53 36 chr20 14108764 14109065 -52558940 - MLT1L LTR MaLR -222 393 88 3967 94 28 0 chr20 14109302 14109866 -52558139 + LTR19B LTR ERV1 1 580 0 182 266 53 44 chr20 14109893 14110006 -52557999 + MIR SINE MIR 30 143 -65 491 279 96 25 chr20 14111017 14111257 -52556748 + MIR SINE MIR 6 262 0 1024 158 47 0 chr20 14111340 14111530 -52556475 - MER66B LTR ERV1 -2 484 286 578 200 69 7 chr20 14111527 14111672 -52556333 - MER90 LTR ERV1 -13 601 448 * 1352 254 8 17 chr20 14111675 14112034 -52555971 - MLT1A1 LTR MaLR 0 365 10 1761 236 32 9 chr20 14112043 14112480 -52555525 - MER90 LTR ERV1 -165 449 3 21 36 0 0 chr20 14112987 14113015 -52554990 + AT_rich Low_complexity Low_complexity 1 28 0 304 218 11 45 chr20 14114201 14114380 -52553625 + (TTATA)n Simple_repeat Simple_repeat 3 175 0 2341 239 52 18 chr20 14114534 14115259 -52552746 - L1MB8 LINE L1 -4 6174 5425 2370 253 66 21 chr20 14115328 14116307 -52551698 - L1MB8 LINE L1 -1338 4808 3786 1379 104 0 0 chr20 14117351 14117534 -52550471 + AluY SINE Alu 129 311 0 356 215 61 61 chr20 14117750 14117913 -52550092 + LTR45B LTR ERV1 312 474 -15 28 0 0 0 chr20 14119438 14119466 -52548539 + AT_rich Low_complexity Low_complexity 1 28 0 230 220 119 51 chr20 14120682 14120800 -52547205 - MER5C DNA MER1_type 0 324 199 3090 170 62 130 chr20 14120944 14121348 -52546657 - MER21A LTR ERV1 -17 914 484 2187 87 0 14 chr20 14121348 14121692 -52546313 + AluY SINE Alu 1 340 0 3090 170 62 130 chr20 14121692 14122258 -52545747 - MER21A LTR ERV1 -447 484 9 204 86 86 0 chr20 14122258 14122328 -52545677 + (TA)n Simple_repeat Simple_repeat 1 76 0 4153 154 63 6 chr20 14122583 14123395 -52544610 - L1MA4A LINE L1 -6 6297 5440 274 333 8 8 chr20 14124179 14124302 -52543703 - MER5C DNA MER1_type -201 123 1 1638 121 9 115 chr20 14124580 14124910 -52543095 - AluSp SINE Alu -18 295 1 657 274 20 0 chr20 14125189 14125386 -52542619 + MER58A DNA MER1_type 7 207 -17 6910 177 10 10 chr20 14125679 14128151 -52539854 + L1PB1 LINE L1 3681 6151 0 320 93 0 0 chr20 14128530 14128573 -52539432 - Alu SINE Alu -11 291 249 2590 226 64 19 chr20 14128610 14129546 -52538459 - L1ME1 LINE L1 -6 6658 5684 322 283 81 0 chr20 14129546 14129645 -52538360 - L1ME1 LINE L1 -4968 1574 1468 1539 235 66 33 chr20 14130073 14130558 -52537447 - MER90 LTR ERV1 -113 501 1 1758 121 23 4 chr20 14131512 14131769 -52536236 - AluSg SINE Alu -17 293 32 465 236 45 19 chr20 14132165 14132322 -52535683 + LTR45 LTR ERV1 365 525 0 29 28 0 0 chr20 14133829 14133865 -52534140 + AT_rich Low_complexity Low_complexity 1 36 0 5629 201 9 28 chr20 14134695 14135979 -52532026 - L1 LINE L1 -2647 3735 2483 6294 27 3 1 chr20 14135979 14136747 -52531258 - L1PA3 LINE L1 0 6155 5409 5629 201 9 28 chr20 14136747 14136905 -52531100 - L1 LINE L1 -3899 2483 2323 3403 162 13 6 chr20 14136901 14138087 -52529918 + L1PB1 LINE L1 4586 5782 -369 * 210 191 0 0 chr20 14138093 14138135 -52529870 + (TA)n Simple_repeat Simple_repeat 2 43 0 2297 126 0 18 chr20 14138146 14138527 -52529478 + L1PB1 LINE L1 5777 6150 -1 21 0 0 0 chr20 14138527 14138548 -52529457 + AT_rich Low_complexity Low_complexity 1 21 0 208 275 170 35 chr20 14138947 14139118 -52528887 - MER5C DNA MER1_type -3 321 128 3152 176 54 112 chr20 14139227 14139991 -52528014 - MER21A LTR ERV1 -17 914 214 1682 15 0 20 chr20 14139991 14140192 -52527813 - AluY SINE Alu -7 304 108 3152 176 54 112 chr20 14140192 14140371 -52527634 - MER21A LTR ERV1 -717 214 26 203 32 65 0 chr20 14140373 14140404 -52527601 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 24 0 0 0 chr20 14140638 14140662 -52527343 + AT_rich Low_complexity Low_complexity 1 24 0 4263 146 62 10 chr20 14140667 14141478 -52526527 - L1MA4A LINE L1 -11 6292 5440 498 279 25 13 chr20 14143762 14143920 -52524085 + MIR3 SINE MIR 43 202 -6 195 204 0 0 chr20 14143974 14144018 -52523987 + (CA)n Simple_repeat Simple_repeat 1 44 0 216 253 11 46 chr20 14144030 14144117 -52523888 + CT-rich Low_complexity Low_complexity 2 85 0 245 330 20 10 chr20 14144958 14145058 -52522947 + MER5B DNA MER1_type 1 101 -77 230 261 15 31 chr20 14145202 14145267 -52522738 + MER5B DNA MER1_type 95 158 -20 189 389 57 64 chr20 14145450 14145607 -52522398 - L2 LINE L2 -16 3256 3101 2771 182 48 42 chr20 14145662 14146354 -52521651 + L1ME2 LINE L1 5450 6145 -19 383 304 121 34 chr20 14146424 14146631 -52521374 + MIR SINE MIR 21 245 -17 188 33 0 33 chr20 14147139 14147169 -52520836 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 568 291 82 28 chr20 14147191 14147545 -52520460 + L1MC4 LINE L1 7382 7754 -288 466 197 123 8 chr20 14147639 14147761 -52520244 + MER58C DNA MER1_type 80 215 0 304 271 56 0 chr20 14147796 14147903 -52520102 + L1MC4 LINE L1 7806 7918 -124 339 184 43 57 chr20 14147935 14148076 -52519929 + L1MC4 LINE L1 7903 8041 -1 194 329 66 0 chr20 14148263 14148339 -52519666 - MIR SINE MIR -2 260 180 282 333 9 9 chr20 14148625 14148733 -52519272 - MER5C DNA MER1_type -201 123 16 2588 113 78 11 chr20 14149291 14149400 -52518605 + L1PB1 LINE L1 5670 5770 -381 288 0 0 0 chr20 14149400 14149432 -52518573 + (TA)n Simple_repeat Simple_repeat 1 32 0 2588 113 78 11 chr20 14149432 14149772 -52518233 + L1PB1 LINE L1 5770 6149 -2 390 263 0 0 chr20 14150630 14150710 -52517295 + L2 LINE L2 3193 3272 0 435 277 46 21 chr20 14151395 14151712 -52516293 - L1ME3A LINE L1 -181 5989 5653 340 233 56 11 chr20 14151793 14151883 -52516122 - MIR SINE MIR -46 216 123 21 36 0 0 chr20 14153321 14153349 -52514656 + AT_rich Low_complexity Low_complexity 1 28 0 1355 210 123 22 chr20 14154159 14154516 -52513489 - MSTD LTR MaLR -3 393 1 1188 246 133 27 chr20 14154611 14155055 -52512950 - LTR16C LTR ERVL 0 491 1 417 263 30 0 chr20 14156052 14156185 -52511820 - L1ME3A LINE L1 -7 6146 6010 194 257 229 19 chr20 14157934 14158039 -52509966 - MIR SINE MIR -42 220 94 1661 199 169 5 chr20 14158692 14159129 -52508876 + LTR22 LTR ERVK 1 509 0 2053 121 45 0 chr20 14159162 14159452 -52508553 + AluSx SINE Alu 3 305 -7 333 296 140 22 chr20 14160714 14160893 -52507112 - MIR SINE MIR -43 219 20 4754 117 5 8 chr20 14161313 14162051 -52505954 - L1PA13 LINE L1 0 6163 5428 5969 157 7 10 chr20 14162052 14164086 -52503919 - L1PB1 LINE L1 0 6151 4124 2342 182 4 2 chr20 14164186 14164663 -52503342 - L1PB1 LINE L1 -1996 4150 3673 1532 236 111 36 chr20 14164817 14165529 -52502476 - MER20B DNA MER1_type -13 770 6 1041 194 74 19 chr20 14165885 14166143 -52501862 + Charlie1b DNA MER1_type 1 272 -251 422 143 0 0 chr20 14166170 14166240 -52501765 + Charlie1b DNA MER1_type 454 523 0 187 255 0 0 chr20 14166609 14166656 -52501349 - L2 LINE L2 0 3272 3226 204 272 87 86 chr20 14166830 14167120 -52500885 - L2 LINE L2 -237 3035 2732 1654 238 64 47 chr20 14167261 14167899 -52500106 + L1ME2 LINE L1 5486 6134 -30 235 96 58 19 chr20 14168243 14168295 -52499710 + MADE1 DNA Mariner 27 80 0 948 279 77 34 chr20 14168731 14169364 -52498641 - L1ME3A LINE L1 -206 5939 5279 432 296 68 31 chr20 14169842 14170603 -52497402 - L1ME3A LINE L1 -1319 4810 4022 507 297 67 8 chr20 14170638 14170877 -52497128 - L1ME3A LINE L1 -2197 3932 3680 262 284 49 27 chr20 14171181 14171364 -52496641 - L1ME3A LINE L1 -2615 3514 3328 667 318 49 35 chr20 14171377 14171867 -52496138 - L1ME3A LINE L1 -5359 760 264 22 0 0 0 chr20 14172034 14172056 -52495949 + AT_rich Low_complexity Low_complexity 1 22 0 318 188 225 0 chr20 14172158 14172238 -52495767 + MER3 DNA MER1_type 1 98 -111 376 179 84 0 chr20 14172398 14172493 -52495512 - MER3 DNA MER1_type -17 192 90 403 310 69 7 chr20 14172981 14173126 -52494879 + MIR3 SINE MIR 3 156 -52 280 305 76 9 chr20 14173959 14174064 -52493941 - MIR SINE MIR -120 142 31 533 265 58 9 chr20 14174235 14174458 -52493547 - L1MA9 LINE L1 -40 6272 6039 2154 108 0 63 chr20 14174540 14174873 -52493132 - AluSx SINE Alu 0 312 1 366 200 47 35 chr20 14175144 14175229 -52492776 - MIR3 SINE MIR -8 200 115 2152 92 7 30 chr20 14176947 14177250 -52490755 + AluY SINE Alu 1 296 -15 387 225 27 63 chr20 14177977 14178088 -52489917 + MIR SINE MIR 74 180 -82 2251 116 0 6 chr20 14179451 14179783 -52488222 - AluSq SINE Alu 0 330 1 334 309 17 11 chr20 14179976 14180157 -52487848 - L1MC4a LINE L1 -1899 5909 5728 249 318 55 0 chr20 14180273 14180383 -52487622 - L1MC4a LINE L1 -470 5651 5536 * 357 173 0 0 chr20 14180382 14180457 -52487548 - L1MA4 LINE L1 -125 6175 6101 247 284 128 0 chr20 14180939 14181041 -52486964 - L1ME LINE L1 -460 5661 5547 502 263 68 10 chr20 14181135 14181340 -52486665 + L1ME3A LINE L1 5944 6160 -10 405 211 26 0 chr20 14181659 14181735 -52486270 - MIR SINE MIR -87 121 44 251 188 16 62 chr20 14181998 14182062 -52485943 - MIR SINE MIR -45 217 157 363 248 18 44 chr20 14182229 14182342 -52485663 - MIR SINE MIR -70 192 83 3994 171 32 35 chr20 14182703 14183791 -52484214 + L1MB8 LINE L1 5099 6177 -1 381 43 0 0 chr20 14184281 14184328 -52483677 + (TG)n Simple_repeat Simple_repeat 2 48 0 918 207 86 9 chr20 14184397 14184629 -52483376 + L1ME3A LINE L1 5808 6057 -113 225 111 0 48 chr20 14185269 14185332 -52482673 + (TTTTG)n Simple_repeat Simple_repeat 1 60 0 1663 172 18 7 chr20 14185363 14185648 -52482357 + AluJb SINE Alu 1 288 -24 257 289 60 78 chr20 14185787 14186005 -52482000 + MIR SINE MIR 19 232 -30 454 199 50 84 chr20 14186066 14186328 -52481677 - LTR37B LTR ERV1 -4 464 212 229 183 17 113 chr20 14186545 14186660 -52481345 - LTR37A LTR ERV1 -233 193 90 2459 77 3 0 chr20 14186991 14187301 -52480704 - AluY SINE Alu 0 311 1 22 0 0 0 chr20 14187422 14187444 -52480561 + AT_rich Low_complexity Low_complexity 1 22 0 679 246 33 24 chr20 14188623 14188834 -52479171 + MLT1J2 LTR MaLR 1 213 -237 329 203 14 0 chr20 14189994 14190068 -52477937 + L1ME2 LINE L1 6080 6154 -10 2054 264 31 17 chr20 14190096 14190233 -52477772 + L1ME3A LINE L1 5447 5581 -589 1802 143 60 30 chr20 14190233 14190597 -52477408 - THE1C LTR MaLR 0 375 1 2054 264 31 17 chr20 14190597 14191160 -52476845 + L1ME3A LINE L1 5581 6157 -13 1860 191 41 59 chr20 14191344 14191427 -52476578 + MLT1D LTR MaLR 1 84 -421 1541 148 7 10 chr20 14191427 14191717 -52476288 + L1MA8 LINE L1 5997 6285 -6 1860 191 41 59 chr20 14191717 14192145 -52475860 + MLT1D LTR MaLR 84 503 -2 1036 291 71 8 chr20 14192594 14192972 -52475033 - LTR16C LTR ERVL 0 491 90 306 273 18 43 chr20 14193607 14193727 -52474278 + MIR SINE MIR 10 127 -81 197 291 10 0 chr20 14194655 14194758 -52473247 + GA-rich Low_complexity Low_complexity 1 104 0 311 211 0 0 chr20 14195667 14195724 -52472281 - MIR SINE MIR -121 141 85 984 150 67 0 chr20 14195879 14196072 -52471933 - L1MB3 LINE L1 -7 6176 5971 403 252 161 39 chr20 14199926 14200156 -52467849 - MIR SINE MIR 0 262 5 720 282 190 35 chr20 14201096 14201611 -52466394 - MLT1G1 LTR MaLR 0 595 1 254 273 140 28 chr20 14201634 14201777 -52466228 - L2 LINE L2 -181 3091 2933 1111 285 91 0 chr20 14201888 14202274 -52465731 - LTR16C LTR ERVL 0 491 71 513 324 61 27 chr20 14202687 14203128 -52464877 + L1M4 LINE L1 4345 4800 -1346 214 136 17 51 chr20 14203488 14203547 -52464458 + GA-rich Low_complexity Low_complexity 3 59 0 532 292 99 26 chr20 14203686 14203919 -52464086 - MIR SINE MIR -2 260 11 604 252 126 18 chr20 14204146 14204368 -52463637 - MIR SINE MIR -1 261 16 1439 110 55 5 chr20 14204846 14205065 -52462940 - MER30 DNA MER1_type 0 230 1 1055 291 112 13 chr20 14205067 14205562 -52462443 + MLT1G1 LTR MaLR 5 592 -3 271 258 110 49 chr20 14206527 14206690 -52461315 - Charlie8 DNA MER1_type -2243 174 2 1389 207 0 58 chr20 14207564 14207859 -52460146 + AluJo SINE Alu 5 282 -30 25 31 0 0 chr20 14207889 14207921 -52460084 + AT_rich Low_complexity Low_complexity 1 32 0 478 298 216 10 chr20 14208061 14208269 -52459736 + MIR SINE MIR 11 261 -1 215 294 0 44 chr20 14208296 14208364 -52459641 + L2 LINE L2 3230 3294 -19 1950 262 18 77 chr20 14208391 14208672 -52459333 + L2 LINE L2 1919 2215 -1099 2342 176 23 59 chr20 14208672 14209196 -52458809 + LTR10B LTR ERV1 1 505 0 1950 262 18 77 chr20 14209196 14209684 -52458321 + L2 LINE L2 2215 2643 -671 809 261 28 21 chr20 14209684 14209975 -52458030 - MLT1G LTR MaLR 0 590 298 372 221 54 5 chr20 14209970 14210078 -52457927 - MLT1G LTR MaLR -446 109 3 * 826 227 45 119 chr20 14210081 14210818 -52457187 + L2 LINE L2 2640 3312 -1 513 277 19 19 chr20 14211398 14211557 -52456448 - MIR SINE MIR -40 222 64 198 103 0 0 chr20 14211726 14211755 -52456250 + (TCTA)n Simple_repeat Simple_repeat 4 32 0 380 163 0 0 chr20 14211852 14211926 -52456079 - L1ME2 LINE L1 0 6166 6090 782 228 56 0 chr20 14212736 14212916 -52455089 + MIR SINE MIR 40 229 -33 416 66 0 0 chr20 14213025 14213086 -52454919 - L1P LINE L1 -780 5385 5325 1413 240 23 70 chr20 14213238 14213751 -52454254 + LTR16C LTR ERVL 3 491 0 203 246 159 0 chr20 14213918 14213987 -52454018 - MIR SINE MIR -67 141 62 372 43 0 0 chr20 14214169 14214215 -52453790 + (CA)n Simple_repeat Simple_repeat 1 46 0 225 246 15 31 chr20 14215421 14215486 -52452519 - MIR SINE MIR -64 144 81 187 339 120 10 chr20 14216943 14217135 -52450870 + L2 LINE L2 2657 2869 -445 * 490 242 25 33 chr20 14217121 14217241 -52450764 - L2 LINE L2 -1 3312 3194 260 391 77 10 chr20 14217238 14217445 -52450560 + L2 LINE L2 2872 3092 -180 * 826 226 65 0 chr20 14217512 14217698 -52450307 - MER58A DNA MER1_type 0 224 27 866 210 10 15 chr20 14217708 14217908 -52450097 + MER3 DNA MER1_type 11 209 0 455 250 9 0 chr20 14217915 14218023 -52449982 + L2 LINE L2 3164 3272 0 185 344 16 0 chr20 14218421 14218482 -52449523 + MIR SINE MIR 60 121 -141 1171 258 97 32 chr20 14219765 14220176 -52447829 - MLT1J1 LTR MaLR -8 438 1 329 287 53 0 chr20 14220813 14220907 -52447098 - L2 LINE L2 -1 3271 3173 301 212 71 0 chr20 14221017 14221102 -52446903 - L1M3b LINE L1 -4640 1641 1551 298 213 38 0 chr20 14221107 14221187 -52446818 + L1M3b LINE L1 1683 1765 -4516 234 259 0 0 chr20 14221410 14221464 -52446541 - L2 LINE L2 -668 2646 2593 346 176 0 15 chr20 14222720 14222788 -52445217 + Tigger2 DNA MER2_type 1 67 -2651 * 2416 142 32 18 chr20 14222780 14223217 -52444788 + Tigger2 DNA MER2_type 2273 2715 -3 866 299 142 22 chr20 14223400 14223936 -52444069 - MLT1L LTR MaLR -11 604 5 246 212 0 61 chr20 14224253 14224319 -52443686 - MLT1J2 LTR MaLR 0 450 389 354 299 21 21 chr20 14224420 14224564 -52443441 - MLT1I LTR MaLR -198 211 68 22 0 0 0 chr20 14224576 14224598 -52443407 + AT_rich Low_complexity Low_complexity 1 22 0 3889 264 65 12 chr20 14224663 14226496 -52441509 - L1M4c LINE L1 -2438 4519 2623 324 120 0 0 chr20 14226564 14226614 -52441391 + (TG)n Simple_repeat Simple_repeat 2 51 0 6198 234 66 32 chr20 14226766 14226899 -52441106 - L1M4c LINE L1 -4452 2686 2559 2123 90 11 7 chr20 14226899 14227178 -52440827 - AluSc SINE Alu -18 291 12 6198 234 66 32 chr20 14227178 14229482 -52438523 - L1M4c LINE L1 -4579 2559 21 304 263 0 0 chr20 14229542 14229618 -52438387 + MLT2E LTR ERVL 553 628 0 180 350 115 18 chr20 14230099 14230385 -52437620 + L2 LINE L2 1520 1833 -1481 2402 93 0 7 chr20 14230623 14230933 -52437072 - AluSx SINE Alu -4 308 1 313 305 165 12 chr20 14231181 14231345 -52436660 - MIR SINE MIR 0 262 74 369 0 0 0 chr20 14231527 14231568 -52436437 + (CA)n Simple_repeat Simple_repeat 1 41 0 291 299 11 11 chr20 14233296 14233383 -52434622 + L2 LINE L2 3168 3254 -18 360 300 97 4 chr20 14234289 14234516 -52433489 - L1MC4 LINE L1 0 8042 7795 983 81 6 25 chr20 14234576 14234737 -52433268 + L1P LINE L1 2352 2509 -3637 435 249 35 30 chr20 14234864 14235061 -52432944 - L1MC5 LINE L1 -461 7500 7303 389 255 21 21 chr20 14235170 14235311 -52432694 - L1MC4 LINE L1 -731 7311 7171 7768 163 54 6 chr20 14236173 14238599 -52429406 + L1PBa LINE L1 1300 3846 -3016 12353 94 7 11 chr20 14238604 14240518 -52427487 + L1P3 LINE L1 2 1887 -4564 790 336 87 47 chr20 14240527 14241435 -52426570 - L2 LINE L2 -199 3073 2120 630 243 107 83 chr20 14242231 14242605 -52425400 - LTR16A LTR ERVL -13 437 55 1686 150 22 8 chr20 14242981 14243248 -52424757 - AluSx SINE Alu -8 304 34 2240 121 0 0 chr20 14243273 14243571 -52424434 - AluSg SINE Alu -12 298 1 561 256 5 111 chr20 14244985 14245184 -52422821 - MER5B DNA MER1_type 0 178 1 546 219 174 13 chr20 14245192 14245347 -52422658 - MER5A DNA MER1_type 0 189 10 1139 228 47 16 chr20 14245354 14245674 -52422331 - MER87 LTR ERV1 -1 540 211 309 235 15 0 chr20 14245887 14245955 -52422050 + MER5A DNA MER1_type 121 189 0 188 138 0 0 chr20 14246167 14246196 -52421809 - MER5B DNA MER1_type 0 178 150 229 267 74 91 chr20 14246208 14246384 -52421621 + L2 LINE L2 860 1032 -2282 637 292 20 0 chr20 14246408 14246610 -52421395 + L2 LINE L2 1188 1393 -1921 2242 137 133 74 chr20 14246610 14246908 -52421097 - LTR64 LTR ERVK 0 558 279 360 0 0 0 chr20 14246908 14246948 -52421057 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 2242 137 133 74 chr20 14246948 14246982 -52421023 - LTR64 LTR ERVK -279 279 248 3968 149 30 1 chr20 14246982 14247345 -52420660 - L1PB4 LINE L1 0 6156 5764 213 39 0 0 chr20 14247345 14247371 -52420634 + (TG)n Simple_repeat Simple_repeat 1 26 0 3968 149 30 1 chr20 14247371 14247686 -52420319 - L1PB4 LINE L1 -392 5764 5459 2242 137 133 74 chr20 14247686 14247879 -52420126 - LTR64 LTR ERVK -310 248 1 411 239 161 0 chr20 14247879 14248034 -52419971 + L2 LINE L2 1390 1569 -1745 1497 277 93 19 chr20 14248043 14248676 -52419329 + L2 LINE L2 2325 3003 -310 255 315 0 34 chr20 14248825 14248971 -52419034 + MARNA DNA Mariner 383 523 -63 313 269 71 43 chr20 14249240 14249381 -52418624 - L1MB8 LINE L1 -258 5920 5776 338 297 68 56 chr20 14249459 14249796 -52418209 - L1MB8 LINE L1 -468 5653 5313 1865 134 0 33 chr20 14250146 14250486 -52417519 - AluSx SINE Alu 0 312 4 1246 126 11 0 chr20 14250554 14250736 -52417269 - AluSg/x SINE Alu 0 312 129 1805 123 60 23 chr20 14250805 14251106 -52416899 - AluSx SINE Alu 0 312 1 526 298 106 49 chr20 14251203 14251609 -52416396 - L1MB8 LINE L1 -1487 4659 4231 419 176 0 0 chr20 14252047 14252121 -52415884 - MER116 DNA Mariner -5 75 2 27 0 0 0 chr20 14252183 14252210 -52415795 + AT_rich Low_complexity Low_complexity 1 27 0 5247 153 51 15 chr20 14252294 14253229 -52414776 - L1MA9 LINE L1 -33 6279 5301 243 0 0 0 chr20 14253229 14253256 -52414749 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5247 153 51 15 chr20 14253256 14253537 -52414468 - L1MA9 LINE L1 -1011 5301 5032 1534 130 17 38 chr20 14253536 14253828 -52414177 - L1MA9 LINE L1 -133 6179 5894 * 2015 146 3 0 chr20 14253817 14254146 -52413859 - L1MA9 LINE L1 -1096 5050 4721 254 182 0 61 chr20 14254380 14254446 -52413559 + CT-rich Low_complexity Low_complexity 3 64 0 429 70 0 0 chr20 14254687 14254744 -52413261 + (TA)n Simple_repeat Simple_repeat 1 57 0 2178 119 0 45 chr20 14256986 14257339 -52410666 - MER1B DNA MER1_type 0 337 1 230 219 252 8 chr20 14258376 14258495 -52409510 - L2 LINE L2 -466 2848 2701 3240 127 16 16 chr20 14258750 14259261 -52408744 + MER75 DNA T2_type 4 514 0 1915 194 34 17 chr20 14260562 14261032 -52406973 - L1MA4 LINE L1 -8 6292 5815 376 313 45 45 chr20 14262351 14262530 -52405475 + L2 LINE L2 3043 3221 -92 29 84 0 0 chr20 14264876 14264947 -52403058 + AT_rich Low_complexity Low_complexity 1 71 0 805 203 11 28 chr20 14265421 14265598 -52402407 - AluJo SINE Alu -18 294 121 73 79 0 0 chr20 14265722 14265886 -52402119 + AT_rich Low_complexity Low_complexity 1 164 0 273 257 51 123 chr20 14266009 14266359 -52401646 + L1ME LINE L1 3893 4217 -1929 318 290 0 21 chr20 14266725 14266870 -52401135 + L1ME LINE L1 4456 4597 -1549 198 0 0 0 chr20 14267122 14267144 -52400861 + (CCA)n Simple_repeat Simple_repeat 1 22 0 189 147 0 0 chr20 14267157 14267191 -52400814 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 325 306 56 12 chr20 14267671 14267831 -52400174 + L1ME LINE L1 5160 5326 -820 2139 109 0 14 chr20 14267867 14268161 -52399844 + AluSc SINE Alu 1 290 -19 360 287 131 47 chr20 14268246 14268605 -52399400 + L1ME LINE L1 5435 5823 -298 918 225 70 12 chr20 14268703 14268947 -52399058 - LTR56 LTR ERV1 0 445 188 21 0 0 0 chr20 14269165 14269186 -52398819 + AT_rich Low_complexity Low_complexity 1 21 0 249 249 85 67 chr20 14269811 14269976 -52398029 - MIR3 SINE MIR -7 201 34 1190 194 49 0 chr20 14270071 14270318 -52397687 + MER58B DNA MER1_type 79 337 -4 302 375 59 0 chr20 14271145 14271281 -52396724 - MIR3 SINE MIR 0 208 65 540 191 55 109 chr20 14272073 14272293 -52395712 + MIR SINE MIR 31 238 -24 252 247 95 79 chr20 14272299 14272489 -52395516 + MIR SINE MIR 66 258 -4 1582 171 29 41 chr20 14274123 14274439 -52393566 - AluJo SINE Alu 0 312 1 208 222 185 0 chr20 14274943 14274997 -52393008 - L2 LINE L2 -27 3245 3182 205 308 26 26 chr20 14275359 14275437 -52392568 - MIR SINE MIR -111 97 20 2275 77 37 0 chr20 14275668 14275966 -52392039 - AluY SINE Alu -2 309 1 2010 113 3 48 chr20 14275966 14276276 -52391729 - AluSx SINE Alu -16 296 1 420 270 50 87 chr20 14327508 14327749 -52340256 + MER102b DNA MER1_type 103 334 -7 294 125 0 0 chr20 14328982 14329030 -52338975 + (TGGA)n Simple_repeat Simple_repeat 3 50 0 182 150 25 0 chr20 14329962 14330002 -52338003 + (CA)n Simple_repeat Simple_repeat 2 42 0 203 292 21 31 chr20 14330114 14330210 -52337795 + (CATA)n Simple_repeat Simple_repeat 4 98 0 220 218 109 0 chr20 14330516 14330571 -52337434 - L2 LINE L2 -15 3257 3197 224 30 30 0 chr20 14330627 14330660 -52337345 + (GA)n Simple_repeat Simple_repeat 1 34 0 191 304 0 36 chr20 14331157 14331213 -52336792 + L2 LINE L2 3148 3201 -71 1786 156 3 33 chr20 14331299 14331600 -52336405 - AluJb SINE Alu -20 292 1 1920 176 76 23 chr20 14331629 14332160 -52335845 - MLT2A2 LTR ERVL 0 554 1 205 233 0 0 chr20 14332165 14332208 -52335797 + MIR SINE MIR 196 238 -24 237 65 0 0 chr20 14332249 14332280 -52335725 + (TCC)n Simple_repeat Simple_repeat 3 33 0 324 343 56 0 chr20 14332354 14332462 -52335543 + MER91C DNA MER1_type 1 114 -26 1889 114 0 4 chr20 14332872 14333136 -52334869 + AluY SINE Alu 27 289 -22 381 348 52 13 chr20 14333240 14333470 -52334535 + L2 LINE L2 1422 1660 -1654 227 164 164 0 chr20 14333507 14333568 -52334437 - L1MC3 LINE L1 -1138 6647 6577 782 185 0 0 chr20 14333578 14333708 -52334297 - AluJb SINE Alu -1 311 182 1277 92 0 0 chr20 14335649 14335822 -52332183 + AluYa5 SINE Alu 134 306 -5 1066 244 30 20 chr20 14335878 14336173 -52331832 - MER89-int LTR ERV1 -5143 1658 1361 1138 213 36 5 chr20 14336203 14336424 -52331581 - MLT1A1 LTR MaLR -25 340 113 314 158 0 0 chr20 14336585 14336642 -52331363 + MER52A LTR ERV1 2 58 -1697 6543 180 130 8 chr20 14337384 14338826 -52329179 + MER52A LTR ERV1 46 1753 -2 857 113 73 7 chr20 14338952 14339102 -52328903 - AluSq SINE Alu -48 265 106 773 119 48 48 chr20 14339216 14339342 -52328663 - AluSg SINE Alu -183 127 2 268 393 51 9 chr20 14340290 14340626 -52327379 + HERV16 LTR ERVL 1023 1372 -3624 1081 337 80 18 chr20 14340691 14341370 -52326635 + HERV16 LTR ERVL 1512 2232 -3422 454 271 24 59 chr20 14341391 14341561 -52326444 - MIR SINE MIR -98 164 1 211 272 0 99 chr20 14342029 14342110 -52325895 + L2 LINE L2 3239 3311 -2 1089 168 10 15 chr20 14342140 14342342 -52325663 + MER41B LTR ERV1 349 549 -86 361 236 34 47 chr20 14342414 14342562 -52325443 - L1MC/D LINE L1 -2037 5771 5626 414 100 0 0 chr20 14342570 14342630 -52325375 + (TA)n Simple_repeat Simple_repeat 2 61 0 23 33 0 0 chr20 14342630 14342660 -52325345 + AT_rich Low_complexity Low_complexity 1 30 0 1905 139 4 4 chr20 14342663 14342943 -52325062 + AluSx SINE Alu 1 280 -32 336 111 0 0 chr20 14342943 14343006 -52324999 + (TCTG)n Simple_repeat Simple_repeat 2 64 0 21 36 0 0 chr20 14343006 14343034 -52324971 + AT_rich Low_complexity Low_complexity 1 28 0 376 106 106 0 chr20 14343076 14343237 -52324768 + (TA)n Simple_repeat Simple_repeat 1 178 0 29 60 0 0 chr20 14343237 14343287 -52324718 + AT_rich Low_complexity Low_complexity 1 50 0 368 96 117 0 chr20 14343289 14343846 -52324159 + (TA)n Simple_repeat Simple_repeat 1 622 0 806 204 12 41 chr20 14343847 14344019 -52323986 - AluJo SINE Alu -144 168 2 248 262 86 70 chr20 14344451 14344638 -52323367 - L1MC5 LINE L1 -48 7913 7724 2158 244 61 23 chr20 14344920 14345659 -52322346 + L1M4 LINE L1 2505 3271 -2875 1657 288 65 92 chr20 14345681 14346521 -52321484 + L1M4 LINE L1 3554 4371 -1775 * 2445 237 39 50 chr20 14346500 14347331 -52320674 + L1MC4 LINE L1 7215 8035 -7 380 220 28 28 chr20 14347564 14347673 -52320332 + MIR SINE MIR 84 192 -70 907 303 149 9 chr20 14347724 14348259 -52319746 + L2 LINE L2 2713 3313 0 27 49 0 0 chr20 14348341 14348382 -52319623 + AT_rich Low_complexity Low_complexity 1 41 0 1963 134 4 0 chr20 14348389 14348664 -52319341 + AluSx SINE Alu 1 276 -36 23 0 0 0 chr20 14348719 14348742 -52319263 + AT_rich Low_complexity Low_complexity 1 23 0 1716 253 31 13 chr20 14350098 14350548 -52317457 + LTR40c LTR ERVL 1 458 -7 646 325 38 80 chr20 14351021 14351760 -52316245 + L1ME2 LINE L1 110 817 -5579 * 2014 264 49 3 chr20 14351743 14352482 -52315523 + L1ME2 LINE L1 2888 3660 -2555 576 284 34 0 chr20 14352517 14352721 -52315284 + L1ME2 LINE L1 3959 4169 -2046 1536 232 166 14 chr20 14352750 14353449 -52314556 + L1ME2 LINE L1 4605 5409 -806 2125 206 89 33 chr20 14353451 14354081 -52313924 + L1ME2 LINE L1 5444 6108 -125 4339 36 4 0 chr20 14354856 14355411 -52312594 + L1P LINE L1 4170 4726 -1420 809 111 0 0 chr20 14356667 14356775 -52311230 + AluSg/x SINE Alu 175 282 -30 345 216 0 0 chr20 14356983 14357057 -52310948 + L1MC4 LINE L1 7785 7858 -184 427 324 0 16 chr20 14357118 14357300 -52310705 + (TA)n Simple_repeat Simple_repeat 2 180 0 235 247 0 0 chr20 14357354 14357427 -52310578 + L1MC4 LINE L1 7925 7997 -45 424 211 0 21 chr20 14357427 14357522 -52310483 - FAM SINE Alu -5 180 88 1215 280 75 20 chr20 14358145 14358859 -52309146 + L1ME3A LINE L1 5183 5934 -236 21 0 0 0 chr20 14359930 14359951 -52308054 + AT_rich Low_complexity Low_complexity 1 21 0 2090 148 33 25 chr20 14360026 14360385 -52307620 - THE1B LTR MaLR -2 362 1 2402 66 0 38 chr20 14360497 14360814 -52307191 + AluY SINE Alu 1 305 -6 380 312 102 16 chr20 14361056 14361242 -52306763 + MIR SINE MIR 61 262 0 242 389 18 42 chr20 14361781 14361948 -52306057 - MIR SINE MIR -79 183 21 225 0 0 0 chr20 14362126 14362151 -52305854 + (TG)n Simple_repeat Simple_repeat 1 25 0 328 268 120 11 chr20 14363638 14363785 -52304220 - MIR SINE MIR -33 175 19 546 239 103 0 chr20 14364247 14364402 -52303603 + MLT1J2 LTR MaLR 280 450 0 300 339 112 52 chr20 14364420 14364706 -52303299 + L2 LINE L2 2967 3269 -3 263 247 108 32 chr20 14365071 14365164 -52302841 + L2 LINE L2 2873 2972 -341 1160 292 78 19 chr20 14365222 14365665 -52302340 + LTR33 LTR ERVL 1 477 -44 2744 106 39 14 chr20 14365665 14366043 -52301962 + MLT2A1 LTR ERVL 1 393 -51 308 102 0 17 chr20 14366043 14366102 -52301903 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 2744 106 39 14 chr20 14366102 14366156 -52301849 + MLT2A1 LTR ERVL 393 444 0 1160 292 78 19 chr20 14366156 14366199 -52301806 + LTR33 LTR ERVL 477 516 -5 2458 11 0 0 chr20 14366314 14366582 -52301423 - AluYa5 SINE Alu -6 305 38 1754 158 16 19 chr20 14366765 14367088 -52300917 + MER2 DNA MER2_type 15 336 -9 277 303 125 20 chr20 14367112 14367264 -52300741 - MIR SINE MIR -5 257 90 3305 45 0 0 chr20 14367317 14367718 -52300287 - L1PA4 LINE L1 -3 6152 5752 225 262 131 0 chr20 14368693 14368754 -52299251 - L2 LINE L2 -19 3294 3226 445 254 141 27 chr20 14369329 14369549 -52298456 + MLT1L LTR MaLR 38 282 -333 272 383 104 0 chr20 14369838 14370039 -52297966 - L2 LINE L2 -663 2651 2430 252 59 0 0 chr20 14370154 14370188 -52297817 + (CTG)n Simple_repeat Simple_repeat 2 35 0 295 353 24 50 chr20 14370373 14370713 -52297292 + LTR16C LTR ERVL 159 489 -2 967 194 122 56 chr20 14370947 14371267 -52296738 - MER2 DNA MER2_type 0 344 4 230 213 106 64 chr20 14371717 14371811 -52296194 + MLT1I LTR MaLR 13 110 -299 863 257 0 5 chr20 14371911 14372174 -52295831 + MLT1I LTR MaLR 89 388 -21 1868 199 39 18 chr20 14372845 14373287 -52294718 + MLT1C LTR MaLR 11 461 -6 27 0 0 0 chr20 14373315 14373342 -52294663 + AT_rich Low_complexity Low_complexity 1 27 0 324 333 33 13 chr20 14373472 14373625 -52294380 + MIR SINE MIR 23 178 -84 396 151 0 0 chr20 14373633 14373706 -52294299 + LTR67 LTR ERVL 2 74 -483 495 299 139 43 chr20 14373761 14374135 -52293870 + LTR67 LTR ERVL 148 557 0 314 268 6 159 chr20 14375110 14375341 -52292664 - MIR SINE MIR -3 205 9 790 328 16 4 chr20 14375467 14375714 -52292291 + MIR SINE MIR 13 262 0 367 228 0 13 chr20 14376512 14376591 -52291414 - MIR3 SINE MIR -6 202 125 522 46 0 0 chr20 14377223 14377288 -52290717 + (TC)n Simple_repeat Simple_repeat 1 65 0 264 256 0 0 chr20 14377298 14377376 -52290629 + L1ME LINE L1 58 135 -5935 2772 94 5 0 chr20 14377384 14377757 -52290248 - THE1C LTR MaLR 0 375 1 253 338 0 0 chr20 14377959 14378030 -52289975 + C-rich Low_complexity Low_complexity 1 71 0 927 251 7 10 chr20 14378367 14378837 -52289168 + L1ME LINE L1 364 940 -5143 879 287 75 41 chr20 14379192 14379684 -52288321 - MLT1H LTR MaLR -40 509 1 282 307 0 13 chr20 14379757 14379832 -52288173 - MIR SINE MIR -85 123 50 2411 184 24 55 chr20 14380144 14380721 -52287284 - L1MB5 LINE L1 -10 6164 5606 234 388 10 0 chr20 14381004 14381107 -52286898 - MIR SINE MIR -67 141 38 813 159 28 14 chr20 14381226 14381371 -52286634 + FRAM SINE Alu 19 165 -11 614 251 94 30 chr20 14381593 14381796 -52286209 - MIR SINE MIR -2 260 45 327 157 0 0 chr20 14381789 14381840 -52286165 - MER5A DNA MER1_type -138 51 1 * 216 250 29 0 chr20 14382408 14382476 -52285529 + (TA)n Simple_repeat Simple_repeat 2 71 0 414 305 11 29 chr20 14383173 14383347 -52284658 + MER5B DNA MER1_type 2 172 -6 1403 202 112 30 chr20 14383471 14383757 -52284248 - MSTD LTR MaLR 0 396 72 2141 131 3 7 chr20 14383757 14384062 -52283943 - AluSq SINE Alu -9 304 1 1403 202 112 30 chr20 14384062 14384141 -52283864 - MSTD LTR MaLR -324 72 1 316 298 106 13 chr20 14384844 14384995 -52283010 - L1ME4a LINE L1 -202 5919 5755 239 294 228 0 chr20 14384999 14385091 -52282914 + MER5A DNA MER1_type 69 181 -8 2273 128 0 3 chr20 14385241 14385554 -52282451 - AluSx SINE Alu 0 312 1 261 222 193 19 chr20 14385601 14385808 -52282197 - L1ME4a LINE L1 -36 6085 5843 202 373 27 0 chr20 14385843 14385918 -52282087 - L3 LINE CR1 -1043 534 458 353 404 13 30 chr20 14385989 14386219 -52281786 - L3 LINE CR1 -1309 268 43 517 317 69 29 chr20 14386243 14386590 -52281415 - MARNA DNA Mariner -201 385 25 1453 219 38 27 chr20 14386598 14386964 -52281041 - MLT1A2 LTR MaLR -4 370 1 216 0 0 0 chr20 14387155 14387179 -52280826 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 23 0 0 0 chr20 14387271 14387294 -52280711 + AT_rich Low_complexity Low_complexity 1 23 0 195 42 0 0 chr20 14387506 14387530 -52280475 + (T)n Simple_repeat Simple_repeat 1 24 0 1935 68 0 16 chr20 14388677 14388925 -52279080 - AluY SINE Alu -5 306 63 252 331 58 32 chr20 14389060 14389214 -52278791 + L2 LINE L2 3149 3306 -7 549 203 25 20 chr20 14389244 14389492 -52278513 + CT-rich Low_complexity Low_complexity 1 249 0 511 311 85 5 chr20 14391059 14391271 -52276734 - MLT1K LTR MaLR -172 416 188 453 273 93 5 chr20 14391911 14392127 -52275878 + L1ME2 LINE L1 5897 6131 -33 3432 180 20 20 chr20 14393571 14393611 -52274394 - L1MB1 LINE L1 -209 5959 5920 606 193 0 0 chr20 14393611 14393746 -52274259 - L1MB1 LINE L1 -1 6167 6033 3432 180 20 20 chr20 14393746 14394895 -52273110 - L1MB1 LINE L1 -248 5920 4759 737 251 48 44 chr20 14395031 14395503 -52272502 - L1MB1 LINE L1 -720 5446 4998 1592 204 28 45 chr20 14395503 14395900 -52272105 + MLT1B LTR MaLR 1 390 0 737 251 48 44 chr20 14395900 14396084 -52271921 - L1MB1 LINE L1 -1168 4998 4816 894 136 0 0 chr20 14396095 14396235 -52271770 - L1PA16 LINE L1 -4 6162 6023 7658 27 0 0 chr20 14396256 14397375 -52270630 - L1PA3 LINE L1 -5 6150 5032 6006 24 0 0 chr20 14397375 14398119 -52269886 + L1PA3 LINE L1 4317 5060 -1086 256 224 40 0 chr20 14398122 14398198 -52269807 - L1PA16 LINE L1 -137 6029 5951 * 747 239 71 11 chr20 14398192 14398472 -52269533 - L1MB1 LINE L1 -1338 4808 4512 22 0 0 0 chr20 14398832 14398854 -52269151 + AT_rich Low_complexity Low_complexity 1 22 0 1046 279 44 8 chr20 14398886 14399251 -52268754 + MER92A LTR ERV1 35 412 0 2268 94 0 3 chr20 14399344 14399641 -52268364 + AluY SINE Alu 1 296 -15 708 237 63 0 chr20 14400176 14400366 -52267639 - MER58 DNA MER1_type -121 220 19 21 36 0 0 chr20 14400426 14400454 -52267551 + AT_rich Low_complexity Low_complexity 1 28 0 312 246 62 17 chr20 14400543 14400722 -52267283 - MER53 DNA DNA 0 189 3 707 238 34 12 chr20 14400794 14401167 -52266838 - MER114 LTR ERV 0 648 241 424 220 62 40 chr20 14401275 14401452 -52266553 - MER114 LTR ERV -465 183 3 23 0 0 0 chr20 14401676 14401699 -52266306 + AT_rich Low_complexity Low_complexity 1 23 0 215 182 23 0 chr20 14401707 14401751 -52266254 + (TA)n Simple_repeat Simple_repeat 1 45 0 2353 74 3 10 chr20 14402404 14402713 -52265292 - AluY SINE Alu -4 307 1 22 35 0 0 chr20 14403084 14403113 -52264892 + AT_rich Low_complexity Low_complexity 1 29 0 301 301 90 8 chr20 14403492 14403625 -52264380 - MIR SINE MIR -71 191 48 19248 31 0 0 chr20 14403910 14407003 -52261002 + L1PA3 LINE L1 3065 6155 0 305 357 47 16 chr20 14407040 14407169 -52260836 - L1ME LINE L1 -394 5727 5595 315 148 26 3 chr20 14407273 14407330 -52260675 - L1MA1 LINE L1 -156 6146 6082 576 126 0 21 chr20 14407330 14407408 -52260597 + L1MA3 LINE L1 6203 6295 -10 315 148 26 3 chr20 14407408 14407425 -52260580 - L1MA1 LINE L1 -220 6082 6067 281 291 74 29 chr20 14407812 14407987 -52260018 + L1ME LINE L1 5598 5780 -341 31 0 0 0 chr20 14408783 14408814 -52259191 + AT_rich Low_complexity Low_complexity 1 31 0 949 263 134 90 chr20 14409564 14409883 -52258122 + MLT1E LTR MaLR 1 357 -236 227 54 27 0 chr20 14409883 14409920 -52258085 + (CAAAC)n Simple_repeat Simple_repeat 2 39 0 949 263 134 90 chr20 14409920 14410166 -52257839 + MLT1E LTR MaLR 357 591 -2 2263 74 3 13 chr20 14411006 14411317 -52256688 + AluSx SINE Alu 5 312 0 29 47 0 0 chr20 14411623 14411666 -52256339 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr20 14411776 14411811 -52256194 + AT_rich Low_complexity Low_complexity 1 35 0 22 56 0 0 chr20 14412038 14412074 -52255931 + AT_rich Low_complexity Low_complexity 1 36 0 742 286 108 25 chr20 14412293 14412692 -52255313 + MLT1J1 LTR MaLR 1 432 -14 22 70 0 0 chr20 14412821 14412864 -52255141 + AT_rich Low_complexity Low_complexity 1 43 0 28 0 0 0 chr20 14413026 14413054 -52254951 + AT_rich Low_complexity Low_complexity 1 28 0 1216 182 17 24 chr20 14413602 14413898 -52254107 - L1MA9 LINE L1 0 6312 6019 35 41 0 0 chr20 14414095 14414144 -52253861 + AT_rich Low_complexity Low_complexity 1 49 0 34579 55 1 4 chr20 14416113 14420179 -52247826 + L1P LINE L1 1 4057 -2089 7316 46 2 3 chr20 14420179 14421077 -52246928 - MER11D LTR ERVK 0 897 1 34579 55 1 4 chr20 14421077 14421422 -52246583 + L1P LINE L1 4057 4401 -1745 1501 219 75 13 chr20 14421523 14421897 -52246108 + LTR52-int LTR ERVL 3109 3505 -51 761 286 114 19 chr20 14421906 14422102 -52245903 + LTR52 LTR ERVL 2 178 -243 336 24 0 0 chr20 14422102 14422143 -52245862 + (CA)n Simple_repeat Simple_repeat 2 42 0 761 286 114 19 chr20 14422143 14422306 -52245699 + LTR52 LTR ERVL 178 395 -26 23 68 0 0 chr20 14422508 14422552 -52245453 + AT_rich Low_complexity Low_complexity 1 44 0 187 427 10 10 chr20 14423885 14423988 -52244017 + L2 LINE L2 3192 3294 -19 25 65 0 0 chr20 14424069 14424115 -52243890 + AT_rich Low_complexity Low_complexity 1 46 0 448 164 0 0 chr20 14424227 14424294 -52243711 + Tigger2 DNA MER2_type 1 67 -2651 * 2344 166 58 2 chr20 14424280 14424707 -52243298 + Tigger2 DNA MER2_type 2267 2717 -1 227 310 14 0 chr20 14424890 14424961 -52243044 + MIR3 SINE MIR 97 168 -40 576 240 27 27 chr20 14425095 14425241 -52242764 + MER58B DNA MER1_type 189 334 -7 297 0 0 0 chr20 14426199 14426232 -52241773 + (TG)n Simple_repeat Simple_repeat 2 34 0 1402 199 79 8 chr20 14426683 14427064 -52240941 - L1MA9 LINE L1 0 6312 5905 1889 182 120 5 chr20 14427072 14427456 -52240549 - MSTA LTR MaLR 0 428 1 219 36 0 0 chr20 14428802 14428830 -52239175 + (GA)n Simple_repeat Simple_repeat 1 28 0 2018 105 3 18 chr20 14428989 14429299 -52238706 + AluSx SINE Alu 1 306 0 4793 184 21 21 chr20 14429341 14430863 -52237142 - L1PA16 LINE L1 -1 6165 4643 615 139 0 0 chr20 14430868 14430969 -52237036 + MER57A-int LTR ERV1 7437 7537 0 2262 169 10 0 chr20 14430971 14431368 -52236637 + MER57A LTR ERV1 3 403 0 36 0 0 0 chr20 14432043 14432079 -52235926 + AT_rich Low_complexity Low_complexity 1 36 0 645 178 30 0 chr20 14432119 14432254 -52235751 + L1MEc LINE L1 42 180 -6243 409 326 77 0 chr20 14432390 14432586 -52235419 + L1MEc LINE L1 2684 2894 -4228 1380 195 37 45 chr20 14432618 14432996 -52235009 + L1MA8 LINE L1 5926 6291 0 611 292 105 16 chr20 14433008 14433456 -52234549 + L1MEc LINE L1 2916 3403 -3538 469 215 30 15 chr20 14433486 14433621 -52234384 + L1ME2 LINE L1 5398 5534 -630 322 273 187 0 chr20 14433672 14433811 -52234194 + L1ME2 LINE L1 6000 6164 0 276 30 0 0 chr20 14434288 14434321 -52233684 + (CA)n Simple_repeat Simple_repeat 2 34 0 189 0 0 0 chr20 14434380 14434401 -52233604 + (TATAA)n Simple_repeat Simple_repeat 5 25 0 183 282 42 14 chr20 14434642 14434713 -52233292 + L2 LINE L2 3226 3298 -15 22 0 0 0 chr20 14435158 14435180 -52232825 + AT_rich Low_complexity Low_complexity 1 22 0 532 183 0 0 chr20 14435197 14435301 -52232704 - L1PA16 LINE L1 -2 6164 6061 3394 50 7 11 chr20 14436069 14436530 -52231475 - L1PA3 LINE L1 0 6155 5697 1347 13 0 0 chr20 14436530 14436681 -52231324 + L1PA3 LINE L1 5528 5678 -477 1283 102 16 0 chr20 14436681 14436867 -52231138 - MER9 LTR ERVK -322 189 1 309 290 40 8 chr20 14437166 14437290 -52230715 + L1ME LINE L1 5345 5472 -690 1025 309 86 27 chr20 14437631 14438108 -52229897 + L1ME3 LINE L1 4964 5411 -751 333 0 0 0 chr20 14438108 14438145 -52229860 + (CA)n Simple_repeat Simple_repeat 2 38 0 1025 309 86 27 chr20 14438145 14438707 -52229298 + L1ME3 LINE L1 5411 6074 -88 594 324 152 3 chr20 14438793 14439123 -52228882 - L2 LINE L2 -698 2616 2238 25 0 0 0 chr20 14439304 14439329 -52228676 + AT_rich Low_complexity Low_complexity 1 25 0 219 69 0 0 chr20 14439573 14439602 -52228403 + (TA)n Simple_repeat Simple_repeat 1 29 0 487 230 22 7 chr20 14440042 14440181 -52227824 - Charlie1 DNA MER1_type -1 2760 2620 * 849 270 35 0 chr20 14440163 14440393 -52227612 - Charlie1 DNA MER1_type -2522 239 2 390 298 136 14 chr20 14440515 14440794 -52227211 + L1M4 LINE L1 3048 3360 -2786 1417 191 0 52 chr20 14441962 14442250 -52225755 + MER44D DNA MER2_type 156 483 -122 458 240 0 40 chr20 14442333 14442380 -52225625 + MER44D DNA MER2_type 489 536 -1955 381 43 0 0 chr20 14442380 14442427 -52225578 + (CA)n Simple_repeat Simple_repeat 2 48 0 458 240 0 40 chr20 14442427 14442504 -52225501 + MER44D DNA MER2_type 536 608 -1 2009 270 26 64 chr20 14443688 14444380 -52223625 - L1M3e LINE L1 -6358 672 7 276 111 0 0 chr20 14444425 14444470 -52223535 + (TG)n Simple_repeat Simple_repeat 2 46 0 881 283 26 29 chr20 14444475 14444821 -52223184 - L1ME LINE L1 -492 6467 6123 457 264 62 0 chr20 14444874 14445052 -52222953 - L1ME LINE L1 -1310 5631 5443 954 301 96 25 chr20 14445264 14445508 -52222497 - MER90 LTR ERV1 -79 535 310 2050 169 88 8 chr20 14445508 14445904 -52222101 - MSTA LTR MaLR 0 428 1 954 301 96 25 chr20 14445904 14446147 -52221858 - MER90 LTR ERV1 -304 310 13 375 278 71 30 chr20 14446166 14446335 -52221670 - L1ME LINE L1 -4720 2221 2046 378 0 0 0 chr20 14446338 14446380 -52221625 + (TG)n Simple_repeat Simple_repeat 2 43 0 3172 171 13 20 chr20 14446389 14446987 -52221018 - L1PA16 LINE L1 -14 6152 5559 1375 182 0 0 chr20 14446987 14447223 -52220782 + L1PA16 LINE L1 5323 5558 -607 390 295 69 34 chr20 14447254 14447528 -52220477 - L1MDb LINE L1 -5036 1908 1544 435 333 92 11 chr20 14447535 14447904 -52220101 - L1MDb LINE L1 -4897 1526 1128 318 290 56 37 chr20 14448424 14448693 -52219312 - L1MDb LINE L1 -6131 292 19 21 0 0 0 chr20 14448874 14448895 -52219110 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr20 14448980 14449010 -52218995 + AT_rich Low_complexity Low_complexity 1 30 0 339 231 77 10 chr20 14449332 14449436 -52218569 - L1MEc LINE L1 -4649 1914 1804 23 33 0 0 chr20 14449670 14449700 -52218305 + AT_rich Low_complexity Low_complexity 1 30 0 374 246 64 35 chr20 14449737 14449908 -52218097 - L1MEc LINE L1 -5142 1421 1246 254 370 65 0 chr20 14449923 14450031 -52217974 - L2 LINE L2 -263 3050 2936 15522 189 29 24 chr20 14450053 14450205 -52217800 + L1M1 LINE L1 13 163 -7402 2331 95 0 6 chr20 14450205 14450520 -52217485 - AluSq SINE Alu 0 313 1 15522 189 29 24 chr20 14450520 14453418 -52214587 + L1M1 LINE L1 163 3077 -4488 3305 142 25 20 chr20 14453422 14454029 -52213976 + L1MA2 LINE L1 5695 6304 0 339 189 52 7 chr20 14454672 14454825 -52213180 + (TA)n Simple_repeat Simple_repeat 2 161 0 523 346 43 31 chr20 14455375 14455699 -52212306 - HERVL LTR ERVL -1124 4530 4203 431 305 119 31 chr20 14455734 14456168 -52211837 - L1ME LINE L1 -5018 1354 945 343 265 0 12 chr20 14457085 14457168 -52210837 + MLT1H LTR MaLR 146 227 -322 24 32 0 0 chr20 14457367 14457398 -52210607 + AT_rich Low_complexity Low_complexity 1 31 0 27 81 0 0 chr20 14457728 14457790 -52210215 + AT_rich Low_complexity Low_complexity 1 62 0 1307 224 6 74 chr20 14458293 14458645 -52209360 + MLT2D LTR ERVL 5 332 -82 21 71 0 0 chr20 14458810 14458852 -52209153 + AT_rich Low_complexity Low_complexity 1 42 0 34 0 0 0 chr20 14458933 14458967 -52209038 + AT_rich Low_complexity Low_complexity 1 34 0 2762 218 34 68 chr20 14460509 14461181 -52206824 - LTR1B LTR ERV1 0 826 188 2266 78 0 0 chr20 14461181 14461464 -52206541 - AluSc SINE Alu -26 283 1 2762 218 34 68 chr20 14461464 14461646 -52206359 - LTR1B LTR ERV1 -638 188 1 22 0 0 0 chr20 14462113 14462135 -52205870 + AT_rich Low_complexity Low_complexity 1 22 0 307 278 83 0 chr20 14463132 14463240 -52204765 + L2 LINE L2 3197 3313 0 4758 190 50 21 chr20 14464835 14466760 -52201245 - L1MA4A LINE L1 0 7365 5390 795 251 48 116 chr20 14466763 14467265 -52200740 - MER66A LTR ERV1 -10 468 1 3521 202 16 8 chr20 14467265 14468026 -52199979 - L1MA4A LINE L1 -1813 5395 4629 362 189 14 14 chr20 14468026 14468174 -52199831 + (TA)n Simple_repeat Simple_repeat 2 149 0 1827 146 50 31 chr20 14468274 14468595 -52199410 + THE1B LTR MaLR 38 364 0 275 111 0 19 chr20 14468595 14468649 -52199356 + (TA)n Simple_repeat Simple_repeat 1 53 0 422 179 0 0 chr20 14468706 14468773 -52199232 - MER66A LTR ERV1 -10 468 402 306 0 0 0 chr20 14468806 14468840 -52199165 + (TA)n Simple_repeat Simple_repeat 1 34 0 323 161 0 12 chr20 14468954 14469035 -52198970 + (TA)n Simple_repeat Simple_repeat 2 81 0 4424 247 28 5 chr20 14469075 14470378 -52197627 - L1MA4A LINE L1 -2589 4619 3288 5846 198 57 55 chr20 14470538 14472490 -52195515 - L1MA4A LINE L1 -4010 3199 689 245 290 161 0 chr20 14474409 14474502 -52193503 - L1ME LINE L1 -537 5584 5477 25 51 0 0 chr20 14474609 14474648 -52193357 + AT_rich Low_complexity Low_complexity 1 39 0 345 296 142 28 chr20 14474963 14475287 -52192718 - L1ME LINE L1 -1440 4706 4346 40 67 0 0 chr20 14475340 14475415 -52192590 + AT_rich Low_complexity Low_complexity 1 75 0 204 97 0 0 chr20 14477201 14477232 -52190773 + (CAT)n Simple_repeat Simple_repeat 3 33 0 759 152 22 60 chr20 14477581 14477765 -52190240 - L1MA8 LINE L1 -3 6288 6112 1076 206 12 16 chr20 14477774 14478021 -52189984 + L1 LINE L1 3663 3908 -2238 920 103 5 32 chr20 14479275 14479460 -52188545 + (TA)n Simple_repeat Simple_repeat 1 180 0 225 0 0 0 chr20 14479471 14479496 -52188509 + (TCTA)n Simple_repeat Simple_repeat 2 26 0 284 339 45 9 chr20 14480069 14480181 -52187824 - L2 LINE L2 -2 3311 3196 22 0 0 0 chr20 14480424 14480446 -52187559 + AT_rich Low_complexity Low_complexity 1 22 0 291 54 0 0 chr20 14481330 14481367 -52186638 + (TA)n Simple_repeat Simple_repeat 1 37 0 260 295 95 0 chr20 14481816 14481911 -52186094 - MLT1I LTR MaLR -54 355 252 29 28 0 0 chr20 14482437 14482473 -52185532 + AT_rich Low_complexity Low_complexity 1 36 0 192 323 129 26 chr20 14482517 14482672 -52185333 - MIR SINE MIR -14 248 78 22 56 0 0 chr20 14483113 14483149 -52184856 + AT_rich Low_complexity Low_complexity 1 36 0 258 232 34 45 chr20 14484167 14484344 -52183661 + (TA)n Simple_repeat Simple_repeat 1 175 0 648 280 103 45 chr20 14484755 14485151 -52182854 - LTR52 LTR ERVL 0 421 3 352 164 0 0 chr20 14485153 14485214 -52182791 - LTR52-int LTR ERVL 0 3556 3496 976 210 25 22 chr20 14485486 14485746 -52182259 + MLT2B3 LTR ERVL 1 252 -201 6533 184 62 65 chr20 14485781 14487430 -52180575 - MER52A LTR ERV1 0 1755 1 1193 209 24 37 chr20 14487430 14487718 -52180287 + MLT2B3 LTR ERVL 266 549 -5 206 310 0 0 chr20 14488025 14488096 -52179909 + T-rich Low_complexity Low_complexity 1 71 0 1421 286 69 15 chr20 14488096 14488575 -52179430 - LTR52-int LTR ERVL -3050 506 2 793 248 92 50 chr20 14488583 14488986 -52179019 - LTR52 LTR ERVL 0 421 2 189 147 0 0 chr20 14489032 14489066 -52178939 + (CTA)n Simple_repeat Simple_repeat 2 35 0 285 316 66 26 chr20 14489096 14489248 -52178757 - MIR SINE MIR 0 262 105 309 240 177 0 chr20 14491576 14491672 -52176333 - L1ME LINE L1 -568 5598 5486 21 0 0 0 chr20 14492151 14492172 -52175833 + AT_rich Low_complexity Low_complexity 1 21 0 1747 203 44 5 chr20 14493495 14493879 -52174126 - L1P LINE L1 -1909 4237 3839 1137 213 66 41 chr20 14493870 14494436 -52173569 - L1 LINE L1 -3778 3787 3210 * 1073 153 86 10 chr20 14494441 14494650 -52173355 + MSTA LTR MaLR 1 225 -203 763 288 23 0 chr20 14494688 14494907 -52173098 - MER58A DNA MER1_type 0 224 1 183 186 0 0 chr20 14496182 14496225 -52171780 + (CA)n Simple_repeat Simple_repeat 1 43 0 27 62 0 0 chr20 14496571 14496619 -52171386 + AT_rich Low_complexity Low_complexity 1 48 0 276 259 82 52 chr20 14496847 14496982 -52171023 - L2 LINE L2 -237 3035 2897 2401 179 100 26 chr20 14497108 14497638 -52170367 + MER101B LTR ERV1 1 569 -1 447 323 82 32 chr20 14497716 14497995 -52170010 - LTR16C LTR ERVL -11 480 188 24 32 0 0 chr20 14498306 14498337 -52169668 + AT_rich Low_complexity Low_complexity 1 31 0 611 63 0 0 chr20 14499114 14499193 -52168812 + MADE1 DNA Mariner 1 79 -1 333 253 0 33 chr20 14500382 14500473 -52167532 - L2 LINE L2 -3 3269 3182 21 95 0 0 chr20 14500649 14500712 -52167293 + AT_rich Low_complexity Low_complexity 1 63 0 252 329 105 49 chr20 14500933 14501258 -52166747 - L1ME3A LINE L1 -234 5936 5594 238 189 54 72 chr20 14501314 14501425 -52166580 + L1M4 LINE L1 3878 3986 -2160 625 308 155 34 chr20 14503095 14503533 -52164472 - L2 LINE L2 0 3313 2823 506 184 61 10 chr20 14504118 14504216 -52163789 + MER20 DNA MER1_type 63 165 -54 1250 228 56 14 chr20 14504567 14504926 -52163079 + Charlie7 DNA MER1_type 1912 2285 -327 356 248 56 31 chr20 14505130 14505149 -52162856 - L1MA10 LINE L1 0 6334 6316 2435 202 104 40 chr20 14505149 14505822 -52162183 - L1ME2 LINE L1 -11 6153 5438 21 0 0 0 chr20 14506066 14506087 -52161918 + AT_rich Low_complexity Low_complexity 1 21 0 2979 185 42 24 chr20 14507091 14507718 -52160287 + LTR9B LTR ERV1 7 644 0 773 206 101 42 chr20 14508132 14508527 -52159478 - MLT1A1 LTR MaLR 0 365 24 210 269 164 0 chr20 14508550 14508617 -52159388 + MIR SINE MIR 76 153 -55 473 240 112 0 chr20 14510406 14510531 -52157474 - LTR52-int LTR ERVL -2633 923 785 1136 208 4 49 chr20 14510534 14510799 -52157206 + MLT1A1 LTR MaLR 113 365 0 286 325 59 44 chr20 14511347 14511635 -52156370 + MLT1G LTR MaLR 192 594 -1 475 294 65 11 chr20 14511766 14511950 -52156055 + MLT1E1 LTR MaLR 57 250 -404 4076 73 3 28 chr20 14511957 14512440 -52155565 - L1PA8 LINE L1 -14 6158 5690 2066 117 7 13 chr20 14512440 14512740 -52155265 - AluY SINE Alu -13 298 1 4076 73 3 28 chr20 14512740 14512833 -52155172 - L1PA8 LINE L1 -482 5690 5596 1560 61 0 0 chr20 14512833 14513030 -52154975 + L1PA8 LINE L1 5400 5596 -576 1268 275 56 29 chr20 14513031 14513475 -52154530 + MLT1E2 LTR MaLR 171 626 0 1164 216 68 85 chr20 14513487 14513932 -52154073 - L1ME LINE L1 -468 5976 5545 228 67 0 0 chr20 14513932 14513962 -52154043 + (TG)n Simple_repeat Simple_repeat 1 30 0 1164 216 68 85 chr20 14513962 14514126 -52153879 - L1ME LINE L1 -899 5545 5380 1063 203 67 45 chr20 14514892 14515222 -52152783 - L1ME LINE L1 -4028 2398 2062 22 0 0 0 chr20 14515257 14515279 -52152726 + AT_rich Low_complexity Low_complexity 1 22 0 1241 251 61 15 chr20 14515297 14515742 -52152263 - L1MCa LINE L1 -4558 1868 1249 1124 234 48 7 chr20 14515816 14516085 -52151920 + MLT1B LTR MaLR 111 390 0 299 171 66 53 chr20 14516085 14516161 -52151844 + L1MCb LINE L1 408 484 -5561 231 88 0 0 chr20 14516201 14516235 -52151770 + (CA)n Simple_repeat Simple_repeat 1 34 0 26 0 0 0 chr20 14516904 14516930 -52151075 + AT_rich Low_complexity Low_complexity 1 26 0 7130 47 0 2 chr20 14516930 14518068 -52149937 - L1PA5 LINE L1 -3 6151 5012 9464 44 1 0 chr20 14518068 14519225 -52148780 + L1PA5 LINE L1 3867 5024 -1122 243 0 0 0 chr20 14519425 14519452 -52148553 + (CAA)n Simple_repeat Simple_repeat 1 27 0 356 315 24 0 chr20 14520714 14520841 -52147164 + MLT1E1 LTR MaLR 404 533 -16 22 35 0 0 chr20 14521250 14521279 -52146726 + AT_rich Low_complexity Low_complexity 1 29 0 279 192 0 0 chr20 14521292 14521344 -52146661 - L2 LINE L2 0 3313 3262 24 32 0 0 chr20 14521556 14521587 -52146418 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr20 14524154 14524182 -52143823 + AT_rich Low_complexity Low_complexity 1 28 0 779 350 24 6 chr20 14525262 14525596 -52142409 + L2 LINE L2 2387 2726 -588 649 245 15 81 chr20 14525610 14525883 -52142122 - LTR41 LTR ERVL -13 760 506 200 311 0 0 chr20 14526327 14526388 -52141617 + (TA)n Simple_repeat Simple_repeat 1 61 0 324 85 0 0 chr20 14526388 14526435 -52141570 - MADE1 DNA Mariner -1 79 33 237 144 67 122 chr20 14526438 14526528 -52141477 + L1MC4 LINE L1 6619 6703 -1339 234 0 0 0 chr20 14526528 14526554 -52141451 + (TA)n Simple_repeat Simple_repeat 2 27 0 23 68 0 0 chr20 14527276 14527320 -52140685 + AT_rich Low_complexity Low_complexity 1 44 0 579 323 5 5 chr20 14528203 14528395 -52139610 - MIR SINE MIR -3 259 68 26 30 0 0 chr20 14528881 14528914 -52139091 + AT_rich Low_complexity Low_complexity 1 33 0 21 71 0 0 chr20 14529240 14529282 -52138723 + AT_rich Low_complexity Low_complexity 1 42 0 454 258 48 8 chr20 14529346 14529470 -52138535 + MIR SINE MIR 48 176 -86 26 74 0 0 chr20 14531055 14531109 -52136896 + AT_rich Low_complexity Low_complexity 1 54 0 1306 267 74 8 chr20 14532260 14532638 -52135367 - MLT2B1 LTR ERVL -35 485 83 658 250 35 6 chr20 14533026 14533198 -52134807 + MER45A DNA AcHobo 1 177 -1 655 285 95 29 chr20 14534030 14534450 -52133555 - L1ME3A LINE L1 -12 6158 5711 216 329 14 0 chr20 14535288 14535361 -52132644 - L2 LINE L2 -3 3310 3237 237 367 0 42 chr20 14535375 14535422 -52132583 - L2 LINE L2 0 3272 3225 691 290 134 45 chr20 14535422 14536028 -52131977 - MLT2F LTR ERVL -3 660 1 237 367 0 42 chr20 14536028 14536100 -52131905 - L2 LINE L2 -47 3225 3158 28 0 0 0 chr20 14536438 14536466 -52131539 + AT_rich Low_complexity Low_complexity 1 28 0 380 246 26 73 chr20 14537321 14537512 -52130493 + L2 LINE L2 3096 3277 -36 317 129 0 48 chr20 14537552 14537614 -52130391 - L1PA5 LINE L1 -13 6141 6083 386 265 101 69 chr20 14539243 14539521 -52128484 + HAL1 LINE L1 818 1152 -1355 396 0 0 0 chr20 14539521 14539565 -52128440 + (TG)n Simple_repeat Simple_repeat 2 45 0 386 265 101 69 chr20 14539565 14539703 -52128302 + HAL1 LINE L1 1152 1284 -1223 239 286 138 20 chr20 14539772 14539968 -52128037 + HAL1 LINE L1 1387 1605 -902 365 281 138 24 chr20 14540026 14540236 -52127769 + HAL1 LINE L1 1684 1917 -590 205 173 25 49 chr20 14541137 14541218 -52126787 + (TA)n Simple_repeat Simple_repeat 2 80 0 184 364 35 63 chr20 14542657 14542800 -52125205 + L2 LINE L2 2916 3054 -259 631 256 20 10 chr20 14542805 14543000 -52125005 + MER105 DNA DNA 4 200 -4 205 310 48 96 chr20 14543017 14543246 -52124759 + L2 LINE L2 3080 3297 -16 896 168 21 11 chr20 14543999 14544189 -52123816 + L1MA6 LINE L1 6109 6300 0 239 352 96 32 chr20 14544200 14544419 -52123586 + MIR SINE MIR 20 252 -10 859 107 0 0 chr20 14547392 14547514 -52120491 - FRAM SINE Alu -1 175 54 347 320 109 6 chr20 14547522 14547697 -52120308 - MIR SINE MIR -62 200 8 1776 184 27 15 chr20 14547712 14548049 -52119956 + MER58B DNA MER1_type 1 341 0 281 191 83 48 chr20 14549042 14549126 -52118879 - MLT1J LTR MaLR -423 88 2 1080 224 29 22 chr20 14549435 14549748 -52118257 + MER33 DNA MER1_type 1 315 -9 201 309 73 0 chr20 14549755 14549823 -52118182 + L2 LINE L2 3198 3270 -43 425 365 36 12 chr20 14549994 14550246 -52117759 + MIR SINE MIR 5 262 0 959 273 90 19 chr20 14550579 14550957 -52117048 - MLT1I LTR MaLR -3 406 2 497 266 87 100 chr20 14551142 14551672 -52116333 + L1ME4a LINE L1 5485 6007 -114 184 240 40 0 chr20 14551837 14551887 -52116118 + L2 LINE L2 3261 3312 -1 7207 32 19 2 chr20 14552521 14553983 -52114022 + L1PA4 LINE L1 4698 6155 0 207 0 0 0 chr20 14554335 14554358 -52113647 + (A)n Simple_repeat Simple_repeat 1 23 0 312 181 97 42 chr20 14554765 14554837 -52113168 - MIR SINE MIR -142 120 45 1837 199 50 13 chr20 14554838 14555220 -52112785 - MER57A LTR ERV1 0 403 8 225 260 87 39 chr20 14555414 14555518 -52112487 + MIR SINE MIR 98 206 -56 2342 95 0 7 chr20 14555583 14555888 -52112117 - AluSp SINE Alu -10 303 1 194 182 250 0 chr20 14556545 14556589 -52111416 + L2 LINE L2 3217 3271 -1 25 51 0 0 chr20 14556878 14556917 -52111088 + AT_rich Low_complexity Low_complexity 1 39 0 1573 166 76 3 chr20 14557048 14557338 -52110667 + AluJb SINE Alu 1 311 -1 23 86 0 0 chr20 14557403 14557461 -52110544 + AT_rich Low_complexity Low_complexity 1 58 0 230 310 99 0 chr20 14557461 14557603 -52110402 + L1ME LINE L1 5482 5637 -484 1674 97 9 0 chr20 14557827 14558053 -52109952 + AluSq SINE Alu 1 228 -85 1528 245 273 23 chr20 14558757 14559857 -52108148 - L2 LINE L2 -10 3303 1919 23 0 0 0 chr20 14560115 14560138 -52107867 + AT_rich Low_complexity Low_complexity 1 23 0 871 282 43 21 chr20 14560161 14560487 -52107518 + L1ME LINE L1 5390 5722 -399 180 0 0 0 chr20 14560705 14560725 -52107280 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 1412 286 52 42 chr20 14560842 14561405 -52106600 - L2 LINE L2 -1 3312 2742 274 291 23 0 chr20 14561405 14561491 -52106514 - L2 LINE L2 -700 2614 2527 846 139 46 13 chr20 14562277 14562428 -52105577 + MER20 DNA MER1_type 2 157 -62 560 281 108 25 chr20 14563429 14563632 -52104373 - MIR SINE MIR 0 262 43 647 227 150 22 chr20 14563930 14564203 -52103802 + HAL1 LINE L1 1230 1537 -970 823 240 98 61 chr20 14564465 14564600 -52103405 + HAL1 LINE L1 2057 2186 -321 1217 197 66 16 chr20 14564600 14564920 -52103085 + MER46C DNA MER2_type 2 337 -1 823 240 98 61 chr20 14564920 14565193 -52102812 + HAL1 LINE L1 2186 2480 -27 341 321 15 22 chr20 14565984 14566121 -52101884 + MIR SINE MIR 17 152 -110 912 135 47 57 chr20 14566140 14566332 -52101673 - MER20 DNA MER1_type -7 212 23 368 293 83 21 chr20 14566565 14566749 -52101256 - MIR3 SINE MIR -9 199 1 203 319 14 0 chr20 14567411 14567480 -52100525 + (TATG)n Simple_repeat Simple_repeat 2 71 0 910 189 0 12 chr20 14567586 14567750 -52100255 - AluJb SINE Alu -9 303 142 23 0 0 0 chr20 14567878 14567901 -52100104 + AT_rich Low_complexity Low_complexity 1 23 0 272 294 85 7 chr20 14568563 14568716 -52099289 - L1ME LINE L1 -304 5817 5653 249 271 0 0 chr20 14568720 14568790 -52099215 - L1ME LINE L1 -499 5622 5553 478 373 12 12 chr20 14569239 14569408 -52098597 + MIR3 SINE MIR 31 199 -9 401 250 61 14 chr20 14569460 14569608 -52098397 - MER103 DNA DNA -1 165 11 281 254 0 0 chr20 14570236 14570295 -52097710 - MER4-int LTR ERV1 -5442 1156 1098 483 311 24 6 chr20 14570524 14570688 -52097317 + MIR SINE MIR 23 189 -73 23 0 0 0 chr20 14571001 14571024 -52096981 + AT_rich Low_complexity Low_complexity 1 23 0 239 239 33 0 chr20 14571024 14571116 -52096889 + L1ME LINE L1 5711 5805 -316 806 132 0 41 chr20 14571124 14571245 -52096760 - FLAM_C SINE Alu -16 127 12 1802 253 95 48 chr20 14571757 14572675 -52095330 + HAL1b LINE L1 123 1083 -265 284 184 145 20 chr20 14572693 14572845 -52095160 + HAL1b LINE L1 1178 1348 0 278 357 31 0 chr20 14574338 14574467 -52093538 - MIR3 SINE MIR -13 195 63 261 0 0 0 chr20 14574796 14574825 -52093180 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 238 383 150 0 chr20 14575343 14575463 -52092542 + L2 LINE L2 3125 3262 -10 949 210 110 0 chr20 14575816 14576106 -52091899 + LTR37A LTR ERV1 105 426 0 207 0 0 0 chr20 14576193 14576216 -52091789 + (TG)n Simple_repeat Simple_repeat 2 24 0 651 292 44 4 chr20 14576216 14576466 -52091539 + MIR SINE MIR 1 260 -2 395 290 82 29 chr20 14576633 14576840 -52091165 + MLT1J LTR MaLR 1 218 -293 1182 172 5 15 chr20 14577024 14577227 -52090778 - AluJo SINE Alu -105 207 7 253 325 36 0 chr20 14577707 14577790 -52090215 - MIR SINE MIR -65 197 112 233 232 10 81 chr20 14579493 14579592 -52088413 - MIR3 SINE MIR -11 197 106 227 360 126 18 chr20 14580484 14580595 -52087410 - L2 LINE L2 -23 3249 3127 687 289 64 40 chr20 14580600 14580765 -52087240 - MIR SINE MIR 0 262 88 2294 187 26 2 chr20 14580765 14581219 -52086786 + MLT1C LTR MaLR 2 466 -1 687 289 64 40 chr20 14581219 14581302 -52086703 - MIR SINE MIR -174 88 8 1270 165 9 0 chr20 14581769 14581993 -52086012 - L1PA15 LINE L1 -13 6152 5927 2391 130 16 3 chr20 14582355 14582733 -52085272 + MLT1B LTR MaLR 4 386 -4 230 300 0 0 chr20 14583307 14583367 -52084638 + (TG)n Simple_repeat Simple_repeat 2 61 0 259 383 67 46 chr20 14584389 14584671 -52083334 + MLT1K LTR MaLR 126 413 -175 1560 264 25 2 chr20 14584899 14585342 -52082663 + L1ME2 LINE L1 5449 5901 -263 460 35 0 0 chr20 14585334 14585391 -52082614 - L1P LINE L1 -5916 230 174 * 16337 67 2 1 chr20 14585395 14587522 -52080483 + L1P LINE L1 674 2803 -3343 245 51 26 0 chr20 14587628 14587667 -52080338 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 2267 177 11 20 chr20 14587678 14588130 -52079875 + L1M4c LINE L1 1477 1924 -4460 2016 152 0 0 chr20 14588132 14588434 -52079571 - AluSx SINE Alu -10 302 1 559 183 8 8 chr20 14588515 14588635 -52079370 - L1MA9 LINE L1 -4 6308 6189 245 215 0 31 chr20 14588635 14588700 -52079305 + L1M4c LINE L1 2039 2101 -4283 * 1694 236 29 28 chr20 14588689 14589341 -52078664 + L1M4c LINE L1 2835 3487 -2895 524 134 0 0 chr20 14589360 14589442 -52078563 + L1M4c LINE L1 1386 1467 -4917 337 146 0 0 chr20 14589444 14589492 -52078513 - Alu SINE Alu -15 287 240 2169 147 55 30 chr20 14589504 14590008 -52077997 - MLT2A2 LTR ERVL -22 532 2 3469 215 42 31 chr20 14590011 14590970 -52077035 + L1M4c LINE L1 3481 4449 -1933 1565 239 45 19 chr20 14592031 14592493 -52075512 + MLT1E2 LTR MaLR 156 626 0 1536 266 55 82 chr20 14592505 14593497 -52074508 + HAL1 LINE L1 739 1704 -803 583 283 97 39 chr20 14593694 14594005 -52074000 + HAL1 LINE L1 2168 2496 -11 631 298 50 17 chr20 14594021 14594259 -52073746 - MIR SINE MIR 0 262 17 1557 192 76 21 chr20 14594672 14595053 -52072952 + LTR52 LTR ERVL 18 419 -2 260 257 76 29 chr20 14595492 14595597 -52072408 - MIR SINE MIR -94 168 59 344 259 108 76 chr20 14595943 14596128 -52071877 - MIR3 SINE MIR -10 198 8 4841 197 23 34 chr20 14596295 14597574 -52070431 - L1MD2 LINE L1 -24 6335 5074 28 0 0 0 chr20 14598482 14598510 -52069495 + AT_rich Low_complexity Low_complexity 1 28 0 424 109 0 0 chr20 14598510 14598565 -52069440 + LOR1-int LTR ERV1 3813 3867 -4253 1308 134 0 0 chr20 14598592 14598801 -52069204 - L1MA2 LINE L1 -4 6300 6092 325 347 172 24 chr20 14599740 14600031 -52067974 - L2 LINE L2 -7 3265 2932 276 287 43 17 chr20 14600263 14600378 -52067627 - MIR SINE MIR -43 219 102 210 37 0 0 chr20 14600462 14600489 -52067516 + (TAAAAA)n Simple_repeat Simple_repeat 4 30 0 363 338 46 9 chr20 14600945 14601161 -52066844 + L1P LINE L1 3509 3732 -2414 201 412 0 8 chr20 14601164 14601283 -52066722 + MIR SINE MIR 41 158 -104 779 216 59 54 chr20 14601345 14601512 -52066493 - MIR SINE MIR -23 239 69 1818 189 55 3 chr20 14601512 14601855 -52066150 + MLT1A1 LTR MaLR 1 361 -4 779 216 59 54 chr20 14601855 14601909 -52066096 - MIR SINE MIR -193 69 17 326 298 127 72 chr20 14601936 14602249 -52065756 + L1ME LINE L1 3862 4156 -1990 2136 174 61 2 chr20 14602249 14602657 -52065348 - MSTB1 LTR MaLR 0 432 1 326 298 127 72 chr20 14602657 14602958 -52065047 + L1ME LINE L1 4156 4510 -1636 21 36 0 0 chr20 14603281 14603309 -52064696 + AT_rich Low_complexity Low_complexity 1 28 0 574 279 60 60 chr20 14603323 14603638 -52064367 + MLT1J LTR MaLR 197 511 0 5092 73 16 0 chr20 14604011 14604698 -52063307 - L1PA10 LINE L1 -186 5982 5285 490 304 68 34 chr20 14604716 14605042 -52062963 + L1ME LINE L1 5484 5820 -301 3278 146 8 42 chr20 14605523 14606139 -52061866 + L1MA10 LINE L1 5740 6334 0 208 311 39 0 chr20 14606940 14607043 -52060962 + L2 LINE L2 2549 2655 -659 303 339 99 9 chr20 14607101 14607322 -52060683 + MIR SINE MIR 6 246 -16 246 207 37 37 chr20 14607406 14607488 -52060517 - MER103 DNA DNA -82 84 3 1788 188 28 6 chr20 14608108 14608465 -52059540 - MLT1A1 LTR MaLR 0 365 1 24 0 0 0 chr20 14608476 14608500 -52059505 + AT_rich Low_complexity Low_complexity 1 24 0 548 326 82 10 chr20 14609110 14609306 -52058699 - MIR SINE MIR -33 229 20 186 327 140 47 chr20 14609379 14609486 -52058519 - L2 LINE L2 -17 3255 3139 1258 113 21 0 chr20 14610164 14610358 -52057647 - L1PB3 LINE L1 0 6154 5957 2869 9 0 0 chr20 14610742 14611057 -52056948 + AluYb8 SINE Alu 1 315 -3 426 253 7 20 chr20 14611069 14611215 -52056790 - L1MC4a LINE L1 -1913 5895 5752 433 280 19 32 chr20 14611288 14611566 -52056439 - L1MEd LINE L1 -4862 1257 1069 455 297 57 29 chr20 14611661 14611907 -52056098 + L1MEd LINE L1 971 1223 -4896 2201 114 0 7 chr20 14612235 14612541 -52055464 - AluSx SINE Alu -8 304 1 397 333 56 12 chr20 14612571 14612733 -52055272 - MIR3 SINE MIR -4 204 36 414 183 65 11 chr20 14613350 14613443 -52054562 + MER5A DNA MER1_type 9 106 -83 796 327 28 6 chr20 14614782 14615143 -52052862 + L1ME LINE L1 5452 5820 -301 1480 148 60 27 chr20 14615946 14616278 -52051727 - L1MA8 LINE L1 0 6291 5949 511 118 0 24 chr20 14617272 14617357 -52050648 - AluSc SINE Alu -226 83 1 3281 164 11 9 chr20 14617358 14617882 -52050123 + HUERS-P3 LTR ERV1 6198 6722 -2197 13005 119 27 45 chr20 14617882 14619051 -52048954 + HUERS-P3 LTR ERV1 6863 8051 -868 209 271 0 68 chr20 14619051 14619110 -52048895 + MER5A DNA MER1_type 1 55 -134 13005 119 27 45 chr20 14619110 14619127 -52048878 + HUERS-P3 LTR ERV1 8051 8067 -852 2225 114 0 7 chr20 14619127 14619435 -52048570 - AluSg SINE Alu -4 306 1 13005 119 27 45 chr20 14619435 14620283 -52047722 + HUERS-P3 LTR ERV1 8067 8919 0 2580 186 19 68 chr20 14620283 14620927 -52047078 + LTR9 LTR ERV1 1 612 0 1835 214 53 22 chr20 14620927 14621743 -52046262 - L1MC4a LINE L1 -477 5707 4918 252 0 0 0 chr20 14621743 14621771 -52046234 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1835 214 53 22 chr20 14621771 14622431 -52045574 - L1MC4a LINE L1 -1266 4918 4020 198 182 0 23 chr20 14622442 14622486 -52045519 - L2 LINE L2 -637 2677 2635 2029 125 3 28 chr20 14623031 14623352 -52044653 - AluSq SINE Alu 0 313 1 335 307 92 33 chr20 14623534 14623687 -52044318 + L2 LINE L2 2988 3149 -164 22 0 0 0 chr20 14623873 14623895 -52044110 + AT_rich Low_complexity Low_complexity 1 22 0 6203 132 52 9 chr20 14624399 14625480 -52042525 + L1MC1 LINE L1 5188 6317 -16 2121 105 19 6 chr20 14625508 14625833 -52042172 - L1PA13 LINE L1 -5 6158 5830 204 381 16 8 chr20 14626087 14626213 -52041792 + L2 LINE L2 2629 2755 -559 526 274 91 43 chr20 14626292 14626488 -52041517 + MIR SINE MIR 20 225 -37 209 194 0 0 chr20 14626958 14626994 -52041011 + (TGAA)n Simple_repeat Simple_repeat 4 39 0 186 133 0 0 chr20 14627715 14627745 -52040260 + (GAAA)n Simple_repeat Simple_repeat 1 30 0 1099 256 62 6 chr20 14628170 14628532 -52039473 - L1ME LINE L1 -552 5618 5237 826 333 89 24 chr20 14628644 14629016 -52038989 + LTR16C LTR ERVL 90 485 -6 242 270 79 0 chr20 14629863 14629952 -52038053 + L2 LINE L2 3218 3313 0 1048 176 0 6 chr20 14630093 14630269 -52037736 - AluSg/x SINE Alu -17 295 121 2583 92 3 3 chr20 14630386 14630744 -52037261 - L1PA12 LINE L1 -329 5839 5482 2399 0 0 0 chr20 14632712 14632967 -52035038 + AluYa5 SINE Alu 39 293 -18 1238 228 47 16 chr20 14633452 14633772 -52034233 - MER87 LTR ERV1 -1 540 211 308 235 15 0 chr20 14633986 14634054 -52033951 + MER5A DNA MER1_type 121 189 0 187 138 0 0 chr20 14634266 14634295 -52033710 - MER5B DNA MER1_type 0 178 150 225 267 74 91 chr20 14634307 14634483 -52033522 + L2 LINE L2 860 1032 -2282 620 292 20 0 chr20 14634507 14634709 -52033296 + L2 LINE L2 1188 1393 -1921 2403 137 133 74 chr20 14634709 14635007 -52032998 - LTR64 LTR ERVK 0 558 279 360 0 0 0 chr20 14635007 14635047 -52032958 + (TTTA)n Simple_repeat Simple_repeat 4 43 0 2403 137 133 74 chr20 14635047 14635081 -52032924 - LTR64 LTR ERVK -279 279 248 4028 147 30 1 chr20 14635081 14635444 -52032561 - L1PB4 LINE L1 0 6156 5764 195 42 0 0 chr20 14635444 14635468 -52032537 + (TG)n Simple_repeat Simple_repeat 1 24 0 4028 147 30 1 chr20 14635468 14635783 -52032222 - L1PB4 LINE L1 -392 5764 5459 2403 137 133 74 chr20 14635783 14635976 -52032029 - LTR64 LTR ERVK -310 248 1 394 239 161 0 chr20 14635976 14636131 -52031874 + L2 LINE L2 1390 1569 -1745 1472 278 91 22 chr20 14636140 14636776 -52031229 + L2 LINE L2 2325 3003 -310 277 294 14 48 chr20 14636925 14637071 -52030934 + MARNA DNA Mariner 383 523 -63 234 274 81 16 chr20 14637340 14637464 -52030541 - L1M4 LINE L1 -258 5920 5789 417 288 77 65 chr20 14637559 14637896 -52030109 - L1M4 LINE L1 -468 5653 5313 1868 131 0 33 chr20 14638246 14638582 -52029423 - AluSx SINE Alu 0 312 4 1221 127 11 0 chr20 14638650 14638831 -52029174 - AluSg/x SINE Alu -1 311 129 1754 128 60 24 chr20 14638877 14639229 -52028776 - AluSx SINE Alu 0 363 1 553 305 94 37 chr20 14639326 14639732 -52028273 - L1M4 LINE L1 -1487 4659 4231 441 162 0 0 chr20 14640170 14640244 -52027761 - MER116 DNA Mariner -5 75 2 219 254 0 61 chr20 14640287 14640401 -52027604 + T-rich Low_complexity Low_complexity 2 108 0 2117 137 16 18 chr20 14640420 14640807 -52027198 - L1MA9 LINE L1 -33 6279 5894 2029 143 3 0 chr20 14640796 14641125 -52026880 - L1MA9 LINE L1 -1096 5050 4721 * 254 182 0 61 chr20 14641359 14641425 -52026580 + CT-rich Low_complexity Low_complexity 3 64 0 543 31 0 0 chr20 14641671 14641736 -52026269 + (TA)n Simple_repeat Simple_repeat 1 65 0 2178 119 0 45 chr20 14643978 14644331 -52023674 - MER1B DNA MER1_type 0 337 1 224 219 252 8 chr20 14645369 14645488 -52022517 - L2 LINE L2 -466 2848 2701 3240 127 16 16 chr20 14645743 14646254 -52021751 + MER75 DNA T2_type 4 514 0 1915 194 34 17 chr20 14647555 14648025 -52019980 - L1MA4 LINE L1 -8 6292 5815 376 313 45 45 chr20 14649344 14649523 -52018482 + L2 LINE L2 3043 3221 -92 28 61 0 0 chr20 14651891 14651940 -52016065 + AT_rich Low_complexity Low_complexity 1 49 0 805 203 11 28 chr20 14652414 14652591 -52015414 - AluJo SINE Alu -18 294 121 70 81 0 0 chr20 14652715 14652876 -52015129 + AT_rich Low_complexity Low_complexity 1 161 0 273 257 51 123 chr20 14652999 14653349 -52014656 + L1ME LINE L1 3893 4217 -1929 307 269 7 28 chr20 14653715 14653860 -52014145 + L1ME LINE L1 4456 4597 -1549 198 0 0 0 chr20 14654112 14654134 -52013871 + (CCA)n Simple_repeat Simple_repeat 1 22 0 189 147 0 0 chr20 14654147 14654181 -52013824 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 325 306 56 12 chr20 14654661 14654821 -52013184 + L1ME LINE L1 5160 5326 -820 2139 109 0 14 chr20 14654857 14655151 -52012854 + AluSc SINE Alu 1 290 -19 360 287 131 47 chr20 14655236 14655595 -52012410 + L1ME LINE L1 5435 5823 -298 918 225 70 12 chr20 14655693 14655937 -52012068 - LTR56 LTR ERV1 0 445 188 21 0 0 0 chr20 14656155 14656176 -52011829 + AT_rich Low_complexity Low_complexity 1 21 0 249 249 85 67 chr20 14656799 14656964 -52011041 - MIR3 SINE MIR -7 201 34 1190 194 49 0 chr20 14657059 14657306 -52010699 + MER58B DNA MER1_type 79 337 -4 302 375 59 0 chr20 14658133 14658269 -52009736 - MIR3 SINE MIR 0 208 65 522 191 55 109 chr20 14659061 14659281 -52008724 + MIR SINE MIR 31 238 -24 234 247 95 79 chr20 14659287 14659477 -52008528 + MIR SINE MIR 66 258 -4 1598 171 29 41 chr20 14661409 14661725 -52006280 - AluJo SINE Alu 0 312 1 215 222 185 0 chr20 14662229 14662283 -52005722 - L2 LINE L2 -27 3245 3182 220 286 26 39 chr20 14662646 14662723 -52005282 - MIR SINE MIR -113 95 20 2302 77 37 0 chr20 14662954 14663252 -52004753 - AluY SINE Alu -2 309 1 2044 114 3 39 chr20 14663252 14663559 -52004446 - AluSx SINE Alu -16 296 1 1058 201 18 25 chr20 14663962 14664133 -52003872 - Charlie5 DNA MER1_type -1 2623 2453 2113 131 3 3 chr20 14664133 14664439 -52003566 + AluSx SINE Alu 1 306 -6 1058 201 18 25 chr20 14664439 14664541 -52003464 - Charlie5 DNA MER1_type -171 2453 2352 646 222 136 0 chr20 14664539 14664715 -52003290 - Charlie5 DNA MER1_type -2412 200 1 * 364 296 98 0 chr20 14664892 14665024 -52002981 + MIR SINE MIR 105 249 -13 1820 238 73 9 chr20 14665193 14665642 -52002363 - L1ME3A LINE L1 -35 6135 5658 2343 103 0 0 chr20 14665926 14666228 -52001777 + AluSc SINE Alu 5 306 -3 254 384 81 34 chr20 14666494 14666817 -52001188 - L2 LINE L2 0 3272 2935 481 253 5 99 chr20 14667021 14667242 -52000763 + L1MC4 LINE L1 7630 7829 -213 487 279 25 13 chr20 14668810 14668968 -51999037 + MIR3 SINE MIR 43 202 -6 195 204 0 0 chr20 14669022 14669066 -51998939 + (CA)n Simple_repeat Simple_repeat 1 44 0 216 253 11 46 chr20 14669078 14669165 -51998840 + CT-rich Low_complexity Low_complexity 2 85 0 244 330 20 10 chr20 14670006 14670106 -51997899 + MER5B DNA MER1_type 1 101 -77 226 261 15 31 chr20 14670250 14670315 -51997690 + MER5B DNA MER1_type 95 158 -20 187 366 45 75 chr20 14670498 14670632 -51997373 - L2 LINE L2 -16 3256 3127 3085 182 48 40 chr20 14670710 14671401 -51996604 + L1ME2 LINE L1 5450 6145 -19 369 304 121 34 chr20 14671471 14671678 -51996327 + MIR SINE MIR 21 245 -17 188 33 0 33 chr20 14672186 14672216 -51995789 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 713 280 77 53 chr20 14672238 14672617 -51995388 + L1MC4 LINE L1 7382 7769 -273 538 189 123 8 chr20 14672686 14672808 -51995197 + MER58C DNA MER1_type 80 215 0 423 171 43 200 chr20 14672843 14673123 -51994882 + L1MC4 LINE L1 7806 8041 -1 538 319 92 0 chr20 14673310 14673495 -51994510 - MIR SINE MIR -2 260 59 1903 206 67 57 chr20 14673618 14674114 -51993891 + MLT1D LTR MaLR 3 503 -2 676 250 0 0 chr20 14675077 14675209 -51992796 + FLAM_A SINE Alu 1 132 -1 429 298 111 25 chr20 14675304 14675502 -51992503 - MIR SINE MIR -8 254 40 1134 230 28 57 chr20 14675509 14675827 -51992178 - LTR16C LTR ERVL 0 491 183 314 277 185 15 chr20 14676331 14676451 -51991554 - MER5A DNA MER1_type 0 189 44 219 69 0 0 chr20 14676451 14676480 -51991525 + (CTG)n Simple_repeat Simple_repeat 1 29 0 627 250 114 26 chr20 14676908 14677136 -51990869 - MIR SINE MIR 0 262 15 2472 111 36 25 chr20 14678854 14679214 -51988791 + THE1B LTR MaLR 1 364 0 747 263 30 38 chr20 14681382 14681626 -51986379 - MLT1H LTR MaLR -270 279 39 370 328 8 31 chr20 14681776 14681904 -51986101 + MER5A DNA MER1_type 65 189 0 289 296 43 37 chr20 14681966 14682128 -51985877 - L2 LINE L2 -1217 2097 1935 1540 126 39 4 chr20 14683200 14683430 -51984575 - AluSg/x SINE Alu -9 303 66 910 272 39 12 chr20 14683944 14684198 -51983807 + MIR SINE MIR 2 262 0 250 215 77 15 chr20 14685301 14685366 -51982639 + LTR16A1 LTR ERVL 205 273 -184 891 204 87 29 chr20 14685955 14686161 -51981844 + MER20 DNA MER1_type 2 219 0 669 260 146 45 chr20 14686686 14687217 -51980788 - MLT1H1 LTR MaLR -5 550 1 264 205 64 64 chr20 14687377 14687455 -51980550 + MIR3 SINE MIR 91 168 -40 2029 152 0 0 chr20 14687529 14687832 -51980173 + AluSx SINE Alu 1 303 -9 245 235 82 47 chr20 14688208 14688293 -51979712 + MIR SINE MIR 4 91 -171 288 260 31 10 chr20 14688590 14688686 -51979319 - MIR SINE MIR -64 144 47 269 156 0 36 chr20 14688787 14688843 -51979162 + MIR3 SINE MIR 100 154 -54 372 331 24 18 chr20 14690392 14690561 -51977444 - MIR SINE MIR -26 236 67 26 50 0 0 chr20 14690843 14690883 -51977122 + AT_rich Low_complexity Low_complexity 1 40 0 860 223 17 0 chr20 14691360 14691535 -51976470 + MER5A DNA MER1_type 1 178 -11 222 281 18 0 chr20 14694240 14694297 -51973708 + CT-rich Low_complexity Low_complexity 3 60 0 218 136 23 0 chr20 14694847 14694891 -51973114 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 641 312 65 5 chr20 14697120 14697319 -51970686 + MIR SINE MIR 14 224 -38 2266 99 0 0 chr20 14697677 14697971 -51970034 + AluSx SINE Alu 1 294 -18 955 250 29 12 chr20 14697989 14698229 -51969776 - MIR SINE MIR -16 246 3 467 168 11 0 chr20 14698922 14699017 -51968988 + GA-rich Low_complexity Low_complexity 1 96 0 266 299 9 27 chr20 14699048 14699213 -51968792 + GA-rich Low_complexity Low_complexity 1 162 0 1960 236 103 6 chr20 14700092 14700576 -51967429 - MLT1H LTR MaLR -8 541 11 205 335 161 21 chr20 14700697 14700933 -51967072 + L2 LINE L2 3030 3298 -15 194 211 118 13 chr20 14702413 14702489 -51965516 + MIR3 SINE MIR 125 208 0 430 330 37 37 chr20 14702624 14702815 -51965190 + MIR SINE MIR 72 262 0 296 306 0 0 chr20 14702855 14702927 -51965078 + L3 LINE CR1 1476 1547 -30 543 257 107 43 chr20 14702927 14703243 -51964762 - MLT1I LTR MaLR 0 409 74 1808 143 0 73 chr20 14703304 14703500 -51964505 - AluSx SINE Alu -4 308 144 2171 108 34 0 chr20 14703500 14703795 -51964210 - AluSq SINE Alu -8 305 1 1808 143 0 73 chr20 14703795 14703927 -51964078 - AluSx SINE Alu -168 144 4 203 276 40 40 chr20 14705414 14705490 -51962515 + L2 LINE L2 3197 3272 -41 383 284 219 0 chr20 14705966 14706121 -51961884 + MIR SINE MIR 60 248 -14 1201 283 102 32 chr20 14706172 14706800 -51961205 + L2 LINE L2 2443 3145 -168 2219 118 3 0 chr20 14706800 14707104 -51960901 - AluSx SINE Alu -7 305 1 1201 283 102 32 chr20 14707104 14707282 -51960723 + L2 LINE L2 3145 3309 -4 352 133 239 26 chr20 14707873 14707986 -51960019 - MER5A DNA MER1_type -52 137 1 1773 115 0 0 chr20 14708080 14708314 -51959691 + AluSx SINE Alu 1 234 -78 2376 155 42 35 chr20 14708317 14708743 -51959262 - LTR32 LTR ERVL -29 442 14 214 155 0 103 chr20 14708770 14708828 -51959177 + L2 LINE L2 3261 3312 -1 505 162 324 14 chr20 14709148 14709290 -51958715 + MER5A DNA MER1_type 1 186 -3 220 220 20 0 chr20 14709393 14709443 -51958562 + GA-rich Low_complexity Low_complexity 2 52 0 22 0 0 0 chr20 14709792 14709814 -51958191 + AT_rich Low_complexity Low_complexity 1 22 0 1661 180 0 10 chr20 14710943 14711232 -51956773 + AluSx SINE Alu 1 286 -26 369 137 55 7 chr20 14711233 14711379 -51956626 + (TA)n Simple_repeat Simple_repeat 2 154 0 25 0 0 0 chr20 14712099 14712124 -51955881 + AT_rich Low_complexity Low_complexity 1 25 0 432 300 45 40 chr20 14712649 14712849 -51955156 + L2 LINE L2 3026 3226 -87 992 240 138 48 chr20 14713949 14714361 -51953644 - MLT1J2 LTR MaLR -1 449 1 1485 186 88 26 chr20 14717185 14717562 -51950443 - MLT1E3 LTR MaLR 0 624 225 394 233 180 79 chr20 14717996 14718185 -51949820 - MIR SINE MIR -21 241 34 386 215 31 11 chr20 14719045 14719171 -51948834 - MIR SINE MIR -62 146 38 184 330 134 0 chr20 14719276 14719373 -51948632 + MER5B DNA MER1_type 1 110 -68 2400 66 0 3 chr20 14719414 14719703 -51948302 - AluY SINE Alu -23 288 1 3922 164 8 5 chr20 14719776 14720540 -51947465 + L1P LINE L1 4147 4912 -1234 3807 70 4 0 chr20 14720568 14721070 -51946935 + L1PA14 LINE L1 5657 6160 -1 205 232 0 41 chr20 14721539 14721637 -51946368 + MIR SINE MIR 104 261 -1 557 209 22 37 chr20 14723354 14723488 -51944517 - MER5B DNA MER1_type -46 132 1 243 333 86 8 chr20 14723513 14723630 -51944375 - MIR SINE MIR -18 244 119 193 341 123 29 chr20 14725354 14725524 -51942481 + L2 LINE L2 2838 3023 -290 604 268 107 33 chr20 14726714 14726957 -51941048 + MIR SINE MIR 2 262 0 281 312 75 17 chr20 14727032 14727205 -51940800 - MLT1K LTR MaLR -59 529 347 235 242 101 50 chr20 14728949 14729048 -51938957 + MIR SINE MIR 42 145 -63 348 301 55 41 chr20 14729190 14729336 -51938669 - MIR SINE MIR -58 150 3 2034 111 10 27 chr20 14729527 14729825 -51938180 + AluSx SINE Alu 1 293 -19 2231 94 0 0 chr20 14730173 14730460 -51937545 + AluY SINE Alu 1 287 -24 243 103 0 0 chr20 14730682 14730721 -51937284 + (CA)n Simple_repeat Simple_repeat 2 40 0 181 400 11 0 chr20 14730772 14730862 -51937143 + L3 LINE CR1 624 714 -863 566 307 35 10 chr20 14731089 14731291 -51936714 + MIR SINE MIR 56 262 0 381 303 38 23 chr20 14731437 14731569 -51936436 + L3 LINE CR1 915 1048 -529 336 265 20 93 chr20 14731690 14731784 -51936221 - MIR SINE MIR -75 187 107 2006 116 34 31 chr20 14731784 14732076 -51935929 + AluSq SINE Alu 1 293 -20 336 265 20 93 chr20 14732076 14732132 -51935873 - MIR SINE MIR -155 107 48 180 111 0 0 chr20 14734515 14734542 -51933463 + (A)n Simple_repeat Simple_repeat 1 27 0 377 302 135 60 chr20 14735627 14736389 -51931616 - L2 LINE L2 -642 2672 1854 186 189 0 0 chr20 14736438 14736475 -51931530 + (CA)n Simple_repeat Simple_repeat 2 38 0 192 376 12 0 chr20 14736481 14736566 -51931439 + L2 LINE L2 3179 3264 -8 787 297 84 23 chr20 14737219 14737613 -51930392 + MER90 LTR ERV1 197 614 0 288 153 20 51 chr20 14737613 14737710 -51930295 - Charlie7 DNA MER1_type -85 2527 2434 269 273 10 20 chr20 14737699 14737714 -51930291 - Charlie7 DNA MER1_type -2514 98 84 * 2507 87 0 0 chr20 14737714 14738025 -51929980 + AluSx SINE Alu 1 311 -1 269 273 10 20 chr20 14738025 14738108 -51929897 - Charlie7 DNA MER1_type -2528 84 1 253 292 28 0 chr20 14738319 14738391 -51929614 - L3b LINE CR1 -121 1462 1389 204 327 14 13 chr20 14738419 14738520 -51929485 - MIR SINE MIR -59 149 54 1762 28 0 14 chr20 14738529 14738746 -51929259 - L1PA4 LINE L1 0 6155 5942 198 0 0 0 chr20 14739728 14739750 -51928255 + (CA)n Simple_repeat Simple_repeat 2 23 0 208 273 30 45 chr20 14740654 14740720 -51927285 - MER5A DNA MER1_type -84 105 41 201 237 0 0 chr20 14742072 14742110 -51925895 + (CA)n Simple_repeat Simple_repeat 1 38 0 444 271 36 29 chr20 14742363 14742503 -51925502 + MER5A DNA MER1_type 44 184 -5 2291 105 3 9 chr20 14742796 14743111 -51924894 - AluSp SINE Alu 0 313 1 273 128 0 0 chr20 14743573 14743620 -51924385 + (TG)n Simple_repeat Simple_repeat 1 47 0 27 29 0 0 chr20 14743700 14743734 -51924271 + AT_rich Low_complexity Low_complexity 1 34 0 386 276 138 64 chr20 14743753 14743822 -51924183 - LTR16A LTR ERVL -6 444 382 1031 196 77 0 chr20 14743822 14744016 -51923989 - MER63A DNA MER1_type -1 209 1 386 276 138 64 chr20 14744016 14744272 -51923733 - LTR16A LTR ERVL -68 382 95 629 182 67 43 chr20 14744321 14744530 -51923475 - L1MC5 LINE L1 -38 7923 7710 767 313 58 49 chr20 14746340 14746768 -51921237 + HAL1 LINE L1 817 1248 -1259 266 268 73 16 chr20 14746987 14747110 -51920895 - L1ME LINE L1 -556 5565 5436 572 305 60 13 chr20 14747225 14747523 -51920482 + HAL1 LINE L1 1507 1818 -689 345 197 14 0 chr20 14747593 14747664 -51920341 - MLT1J2 LTR MaLR -127 323 252 1920 158 3 7 chr20 14749044 14749342 -51918663 + AluJb SINE Alu 1 297 -15 2271 138 28 0 chr20 14749425 14749779 -51918226 + THE1B LTR MaLR 1 364 0 549 276 102 0 chr20 14749831 14750056 -51917949 + L1MEd LINE L1 2 249 -5870 969 280 129 20 chr20 14750142 14750793 -51917212 + L1MEd LINE L1 363 1084 -5035 * 2677 152 86 2 chr20 14750784 14751329 -51916676 - L1MA5A LINE L1 -1904 4242 3652 5838 137 40 17 chr20 14751331 14751586 -51916419 + L1MA5A LINE L1 4230 4478 -1819 2285 117 0 3 chr20 14751586 14751894 -51916111 + AluSx SINE Alu 1 307 -5 5838 137 40 17 chr20 14751894 14752679 -51915326 + L1MA5A LINE L1 4478 5243 -1054 183 42 0 0 chr20 14752679 14752703 -51915302 + (CAA)n Simple_repeat Simple_repeat 1 24 0 5838 137 40 17 chr20 14752703 14753697 -51914308 + L1MA5A LINE L1 5243 6294 -3 25 51 0 0 chr20 14753829 14753868 -51914137 + AT_rich Low_complexity Low_complexity 1 39 0 330 26 0 0 chr20 14754030 14754069 -51913936 + (TG)n Simple_repeat Simple_repeat 2 40 0 182 344 95 26 chr20 14755189 14755378 -51912627 - MIR SINE MIR -59 203 2 892 285 82 5 chr20 14755697 14756073 -51911932 + LTR16C LTR ERVL 85 489 -2 531 318 77 5 chr20 14756303 14756523 -51911482 + MIR SINE MIR 12 247 -15 230 340 20 20 chr20 14756772 14756872 -51911133 + L2 LINE L2 2932 3031 -241 258 307 129 0 chr20 14757296 14757397 -51910608 + L2 LINE L2 3199 3312 -1 1094 269 102 44 chr20 14757564 14758066 -51909939 + MLT1H LTR MaLR 19 549 0 2430 97 0 0 chr20 14758376 14758686 -51909319 + AluY SINE Alu 1 310 -1 491 261 9 17 chr20 14758730 14758845 -51909160 - L2 LINE L2 -3 3310 3197 296 125 39 173 chr20 14759442 14759546 -51908459 + MLT1F LTR MaLR 414 503 -39 343 305 120 12 chr20 14759659 14759826 -51908179 + L1MC/D LINE L1 5265 5449 -793 3326 216 62 58 chr20 14760447 14762096 -51905909 + L1MCc LINE L1 -514 1465 -4961 2269 86 48 0 chr20 14762096 14762386 -51905619 + AluSc SINE Alu 1 304 -5 3326 216 62 58 chr20 14762386 14762502 -51905503 + L1MCc LINE L1 1465 1579 -4847 307 205 74 127 chr20 14762502 14762728 -51905277 + MSTD LTR MaLR 1 276 -120 7077 157 15 20 chr20 14762730 14763390 -51904615 + L1MA5 LINE L1 4039 4701 -1599 3011 128 14 0 chr20 14763390 14763818 -51904187 + MER57B LTR ERV1 1 434 0 5808 129 29 2 chr20 14763818 14764921 -51903084 + L1PA16 LINE L1 5026 6151 -15 7077 157 15 20 chr20 14764921 14766516 -51901489 + L1MA5 LINE L1 4699 6294 -6 768 148 20 10 chr20 14766535 14766669 -51901336 + MSTD LTR MaLR 249 388 -8 778 195 63 20 chr20 14766671 14766880 -51901125 + L1MCc LINE L1 1692 1885 -4541 1363 194 32 25 chr20 14766883 14767167 -51900838 + AluJo SINE Alu 1 286 -26 209 108 0 27 chr20 14767167 14767204 -51900801 + (CA)n Simple_repeat Simple_repeat 1 36 0 1037 176 33 107 chr20 14767210 14767482 -51900523 - AluJo SINE Alu -60 252 1 1407 212 64 36 chr20 14767483 14767959 -51900046 + L1MCc LINE L1 2043 2479 -3947 789 281 39 78 chr20 14768177 14768612 -51899393 - MLT1J LTR MaLR 0 511 94 232 260 0 65 chr20 14769052 14769129 -51898876 - MLT1K LTR MaLR -10 578 507 438 20 0 0 chr20 14769172 14769223 -51898782 + (TG)n Simple_repeat Simple_repeat 2 52 0 248 345 69 52 chr20 14769435 14769551 -51898454 - MLT1K LTR MaLR -360 228 111 368 62 0 0 chr20 14769764 14769812 -51898193 + MADE1 DNA Mariner 33 80 0 1169 292 58 7 chr20 14769924 14770356 -51897649 + LTR16C LTR ERVL 38 491 0 317 250 107 0 chr20 14771045 14771129 -51896876 + L2 LINE L2 2922 3014 -299 284 237 0 0 chr20 14771152 14771211 -51896794 + Charlie5 DNA MER1_type 1 59 -2553 * 784 217 71 0 chr20 14771206 14771418 -51896587 + Charlie5 DNA MER1_type 2337 2563 -49 1594 194 19 16 chr20 14772864 14773179 -51894826 - MLT1A1 LTR MaLR -49 316 1 489 86 14 0 chr20 14773179 14773249 -51894756 - L1MB1 LINE L1 -37 6152 6082 922 115 6 13 chr20 14773389 14773546 -51894459 + (TTTC)n Simple_repeat Simple_repeat 2 157 0 1693 187 11 0 chr20 14773548 14773831 -51894174 - AluJo SINE Alu -26 286 1 237 145 48 0 chr20 14773977 14774039 -51893966 + CT-rich Low_complexity Low_complexity 1 65 0 204 260 55 41 chr20 14774075 14774148 -51893857 - L2 LINE L2 -70 3243 3170 270 160 0 0 chr20 14775278 14775328 -51892677 + A-rich Low_complexity Low_complexity 2 51 0 212 354 59 29 chr20 14775470 14775679 -51892326 - MIR SINE MIR -1 261 31 511 312 54 25 chr20 14775775 14776054 -51891951 - L2 LINE L2 -572 2742 2456 2313 84 0 3 chr20 14776383 14776680 -51891325 - AluSg SINE Alu -13 297 2 1676 221 62 26 chr20 14776747 14777167 -51890838 + MER63B DNA MER1_type 1 435 -1 2371 157 0 54 chr20 14777200 14777626 -51890379 - MER57A LTR ERV1 0 403 1 196 295 0 49 chr20 14777727 14777788 -51890217 - L2 LINE L2 -10 3262 3205 482 234 85 7 chr20 14777789 14777930 -51890075 - MIR SINE MIR -3 259 108 21 57 0 0 chr20 14778190 14778225 -51889780 + AT_rich Low_complexity Low_complexity 1 35 0 222 91 0 0 chr20 14779148 14779181 -51888824 + (TA)n Simple_repeat Simple_repeat 1 33 0 1105 98 0 0 chr20 14779181 14779324 -51888681 - AluSg/x SINE Alu -25 287 145 395 297 133 22 chr20 14779699 14780011 -51887994 + L2 LINE L2 2697 3050 -263 1477 220 8 47 chr20 14780019 14780378 -51887627 - MLT1A1 LTR MaLR 0 365 21 557 264 119 22 chr20 14780412 14780689 -51887316 - LTR16C LTR ERVL -100 391 88 670 235 77 141 chr20 14781040 14781495 -51886510 - MLT1J2 LTR MaLR -2 448 23 232 194 32 0 chr20 14781525 14781587 -51886418 - MER113 DNA MER1_type? -426 95 32 236 128 26 0 chr20 14781731 14781770 -51886235 - MLT1H LTR MaLR -13 577 538 419 274 160 50 chr20 14781776 14781995 -51886010 - MLT1H LTR MaLR -174 375 133 1834 163 140 93 chr20 14781995 14782487 -51885518 - MLT2B2 LTR ERVL 0 515 1 1629 255 134 16 chr20 14783085 14783576 -51884429 + MLT1H LTR MaLR 1 549 0 260 209 38 48 chr20 14783825 14783930 -51884075 + MLT1J2 LTR MaLR 325 428 -22 1786 237 49 25 chr20 14784488 14784978 -51883027 - L1ME3 LINE L1 -4 6158 5657 328 212 71 20 chr20 14785032 14785131 -51882874 + L1ME3A LINE L1 5743 5846 -275 288 0 0 0 chr20 14785245 14785277 -51882728 + (TG)n Simple_repeat Simple_repeat 2 33 0 29 47 0 0 chr20 14785382 14785425 -51882580 + AT_rich Low_complexity Low_complexity 1 43 0 406 203 0 0 chr20 14786415 14786489 -51881516 + MER58 DNA MER1_type 25 98 -2322 327 284 0 20 chr20 14786502 14786604 -51881401 + MER58 DNA MER1_type 2318 2417 -3 415 250 0 19 chr20 14786712 14786816 -51881189 + MLT1J2 LTR MaLR 32 133 -317 428 290 62 56 chr20 14786910 14787072 -51880933 + MLT1J2 LTR MaLR 288 450 0 1369 242 31 50 chr20 14788382 14788858 -51879147 + L1MC4 LINE L1 7392 7858 -184 645 215 207 160 chr20 14788877 14789148 -51878857 - MLT1H LTR MaLR -18 531 274 396 0 0 0 chr20 14789148 14789192 -51878813 + (CA)n Simple_repeat Simple_repeat 1 44 0 645 215 207 160 chr20 14789192 14789427 -51878578 - MLT1H LTR MaLR -275 274 1 596 214 213 0 chr20 14789511 14789745 -51878260 + L1ME3A LINE L1 5876 6163 -1 496 253 73 27 chr20 14789763 14789913 -51878092 + MIR3 SINE MIR 23 179 -29 288 224 282 0 chr20 14790698 14790783 -51877222 - L2 LINE L2 -1 3312 3204 238 156 78 111 chr20 14790857 14790947 -51877058 - MIR SINE MIR -75 187 101 892 244 52 5 chr20 14791027 14791240 -51876765 + MER58A DNA MER1_type 1 223 -1 868 231 183 53 chr20 14791262 14791656 -51876349 - MLT1J2 LTR MaLR -5 445 1 692 214 62 45 chr20 14791770 14791994 -51876011 + L1MC5 LINE L1 7701 7928 -33 243 301 115 39 chr20 14792423 14792579 -51875426 - MLT1J2 LTR MaLR -16 434 267 1978 134 6 34 chr20 14792596 14792917 -51875088 + AluSx SINE Alu 1 312 0 181 216 27 0 chr20 14793122 14793159 -51874846 - L2 LINE L2 -112 3160 3123 374 282 111 69 chr20 14795783 14795841 -51872164 + L1M2 LINE L1 677 731 -6118 591 40 0 0 chr20 14795841 14795915 -51872090 + (TCC)n Simple_repeat Simple_repeat 1 74 0 374 282 111 69 chr20 14795915 14796181 -51871824 + L1M2 LINE L1 731 984 -5865 234 62 0 0 chr20 14796181 14796213 -51871792 + (CGG)n Simple_repeat Simple_repeat 3 34 0 374 282 111 69 chr20 14796213 14796367 -51871638 + L1M2 LINE L1 984 1368 -5481 204 67 0 0 chr20 14796425 14796455 -51871550 + (CTG)n Simple_repeat Simple_repeat 2 31 0 2172 73 22 0 chr20 14797511 14797849 -51870156 + AluSx SINE Alu 3 346 0 632 207 58 29 chr20 14797955 14798129 -51869876 - MIR SINE MIR -2 260 82 774 196 65 54 chr20 14799391 14799462 -51868543 - MIR SINE MIR 0 262 193 2579 47 0 25 chr20 14799462 14799781 -51868224 - AluY SINE Alu 0 311 1 774 196 65 54 chr20 14799781 14799893 -51868112 - MIR SINE MIR -69 193 77 230 177 0 32 chr20 14800044 14800106 -51867899 - L1MC4 LINE L1 -1330 6712 6653 1448 238 92 53 chr20 14801067 14801579 -51866426 - MLT1H LTR MaLR 0 549 18 357 302 50 16 chr20 14801641 14801823 -51866182 - L1M4 LINE L1 -3712 2434 2247 2292 97 0 0 chr20 14801842 14802131 -51865874 - AluY SINE Alu -22 289 1 2496 63 0 0 chr20 14802135 14802436 -51865569 - AluY SINE Alu -10 301 1 2305 99 0 26 chr20 14802588 14802901 -51865104 - AluSx SINE Alu -7 305 1 558 313 102 31 chr20 14802931 14803410 -51864595 - HAL1 LINE L1 -781 1726 1214 333 217 9 19 chr20 14803678 14803784 -51864221 + CT-rich Low_complexity Low_complexity 4 108 0 2028 241 33 10 chr20 14803797 14804316 -51863689 - L1ME2 LINE L1 0 6164 5634 441 341 41 52 chr20 14804761 14805128 -51862877 - L3b LINE CR1 -107 1476 1114 237 65 0 0 chr20 14805373 14805404 -51862601 + (GAAAA)n Simple_repeat Simple_repeat 5 35 0 760 234 64 0 chr20 14805566 14805754 -51862251 + LTR16C LTR ERVL 289 488 -3 581 200 87 13 chr20 14806779 14806795 -51861210 - L1MA10 LINE L1 0 6334 6319 1721 234 107 19 chr20 14806795 14807328 -51860677 - L1ME1 LINE L1 -5 6161 5582 2366 93 3 0 chr20 14807943 14808243 -51859762 + AluSp SINE Alu 2 302 -11 394 257 40 10 chr20 14808488 14808589 -51859416 + MER5A DNA MER1_type 9 112 -77 5616 128 21 9 chr20 14808602 14809541 -51858464 - L1PB4 LINE L1 -4 6152 5215 254 261 15 0 chr20 14809541 14809606 -51858399 + MER5A DNA MER1_type 124 189 0 234 180 10 56 chr20 14809905 14809980 -51858025 - MLT1I LTR MaLR -260 180 104 323 311 95 20 chr20 14809981 14810129 -51857876 + MIR SINE MIR 25 183 -79 2215 110 0 3 chr20 14810556 14810848 -51857157 - AluSc SINE Alu -15 294 4 906 112 8 0 chr20 14810970 14811095 -51856910 - THE1A LTR MaLR -229 126 1 5313 74 5 0 chr20 14811095 14811755 -51856250 - THE1A-int LTR MaLR 0 1580 918 598 52 39 0 chr20 14811760 14811837 -51856168 - THE1A LTR MaLR -275 80 1 1980 218 89 4 chr20 14811838 14812343 -51855662 + L1ME3A LINE L1 5610 6157 -13 217 404 68 0 chr20 14814340 14814486 -51853519 - MIR3 SINE MIR -3 205 50 644 325 193 17 chr20 14814771 14815501 -51852504 - L2 LINE L2 0 3313 2448 2056 308 143 34 chr20 14815558 14817061 -51850944 - L2 LINE L2 -1180 2134 468 918 230 94 5 chr20 14817518 14817731 -51850274 - MIR SINE MIR -21 241 10 375 281 21 1 chr20 14817773 14817882 -51850123 + MIR SINE MIR 20 130 -78 363 136 51 0 chr20 14817883 14817942 -51850063 - MLT1J1 LTR MaLR -120 326 265 273 88 0 0 chr20 14817954 14817988 -51850017 - MLT1I LTR MaLR -249 160 127 726 196 0 77 chr20 14819746 14819914 -51848091 - MLT1E LTR MaLR 0 593 439 * 933 245 71 41 chr20 14819907 14820201 -51847804 - MLT1E LTR MaLR -290 303 1 210 111 89 0 chr20 14820311 14820356 -51847649 + (CATTT)n Simple_repeat Simple_repeat 4 52 0 2127 99 3 20 chr20 14820614 14820916 -51847089 + AluSx SINE Alu 1 297 -15 267 308 115 10 chr20 14821238 14821342 -51846663 - MIR SINE MIR -64 144 30 2080 99 17 3 chr20 14821583 14821877 -51846128 + AluSq SINE Alu 2 299 -14 378 0 0 0 chr20 14822146 14822188 -51845817 + (TG)n Simple_repeat Simple_repeat 2 43 0 558 29 0 0 chr20 14824399 14824467 -51843538 + (TTTTG)n Simple_repeat Simple_repeat 3 70 0 475 223 16 33 chr20 14825150 14825271 -51842734 - MER5B DNA MER1_type -6 172 54 412 311 74 16 chr20 14825284 14825406 -51842599 + L2 LINE L2 3144 3272 0 2118 101 0 17 chr20 14827097 14827395 -51840610 + AluSx SINE Alu 1 293 -19 774 236 34 0 chr20 14828179 14828357 -51839648 - MER5A DNA MER1_type 0 189 6 214 269 0 23 chr20 14828491 14828564 -51839441 + (TA)n Simple_repeat Simple_repeat 2 75 -97 1833 107 13 63 chr20 14828564 14828886 -51839119 + AluSx SINE Alu 1 307 0 214 269 0 23 chr20 14828886 14828986 -51839019 + (TA)n Simple_repeat Simple_repeat 75 172 0 840 310 55 11 chr20 14829544 14829892 -51838113 - L2 LINE L2 -1 3312 2950 271 329 77 19 chr20 14830095 14830250 -51837755 - L2 LINE L2 -164 3108 2945 303 274 27 0 chr20 14830349 14830422 -51837583 - MER91A DNA MER1_type -114 82 8 2202 118 0 0 chr20 14830742 14831047 -51836958 + AluSx SINE Alu 1 305 -7 269 285 23 41 chr20 14831397 14831540 -51836465 + MIR SINE MIR 113 251 -11 212 180 100 20 chr20 14831707 14831757 -51836248 - MIR SINE MIR -118 144 91 1581 119 0 9 chr20 14831861 14832088 -51835917 + AluSq SINE Alu 1 225 -88 290 265 112 0 chr20 14832610 14832708 -51835297 + MIR SINE MIR 111 219 -43 655 255 14 0 chr20 14832758 14832903 -51835102 + LTR33 LTR ERVL 14 160 -361 591 272 35 26 chr20 14832926 14833154 -51834851 + LTR33 LTR ERVL 292 521 0 2422 69 7 0 chr20 14833629 14833933 -51834072 + AluSx SINE Alu 1 306 -6 265 318 87 16 chr20 14834025 14834068 -51833937 + L2 LINE L2 3175 3214 -99 1069 212 71 67 chr20 14834068 14834534 -51833471 - LTR37B LTR ERV1 0 468 1 265 318 87 16 chr20 14834534 14834616 -51833389 + L2 LINE L2 3214 3309 -4 347 281 10 0 chr20 14835391 14835487 -51832518 - MLT1H LTR MaLR 0 549 453 287 301 58 0 chr20 14835594 14835697 -51832308 - MLT1H LTR MaLR -244 305 197 2160 98 0 35 chr20 14835760 14836078 -51831927 + AluSq SINE Alu 1 307 -6 256 344 10 0 chr20 14836172 14836268 -51831737 - MIR SINE MIR -95 113 17 658 281 25 10 chr20 14840079 14840282 -51827723 - L1MC4 LINE L1 -1040 7002 6797 423 38 0 0 chr20 14840306 14840359 -51827646 + MADE1 DNA Mariner 1 53 -27 563 308 70 48 chr20 14840468 14840880 -51827125 - MLT1J LTR MaLR -90 421 1 905 107 36 0 chr20 14842731 14843033 -51824972 + CT-rich Low_complexity Low_complexity 1 312 0 971 182 6 0 chr20 14843396 14843572 -51824433 + FRAM SINE Alu 1 176 0 770 308 84 35 chr20 14844101 14844529 -51823476 + L2 LINE L2 2825 3273 -40 509 192 8 0 chr20 14844538 14844663 -51823342 + (TGGA)n Simple_repeat Simple_repeat 1 126 0 536 262 28 0 chr20 14845528 14845669 -51822336 - MER104 DNA Tc2 -4 176 32 238 167 42 0 chr20 14845670 14845718 -51822287 + A-rich Low_complexity Low_complexity 1 50 0 301 336 12 52 chr20 14846097 14846271 -51821734 - MIR SINE MIR -73 189 24 1571 191 0 14 chr20 14846414 14846707 -51821298 - AluJb SINE Alu -23 289 1 351 0 0 0 chr20 14847844 14847883 -51820122 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1526 203 0 4 chr20 14847883 14848164 -51819841 - AluJo SINE Alu -32 280 1 225 94 0 0 chr20 14848688 14848720 -51819285 + (TG)n Simple_repeat Simple_repeat 1 32 0 31 0 0 0 chr20 14849294 14849325 -51818680 + GC_rich Low_complexity Low_complexity 1 31 0 507 227 0 170 chr20 14850120 14850367 -51817638 + MIR SINE MIR 34 238 -24 219 336 107 8 chr20 14850415 14850546 -51817459 + MIR3 SINE MIR 2 145 -63 465 252 110 8 chr20 14853153 14853280 -51814725 + MIR SINE MIR 1 140 -122 782 249 179 56 chr20 14853290 14853736 -51814269 - MLT1H1 LTR MaLR -28 527 27 287 241 81 11 chr20 14853750 14853837 -51814168 + MIR SINE MIR 170 262 0 358 214 120 60 chr20 14853892 14854009 -51813996 + MLT1H1 LTR MaLR 395 518 -37 1255 263 92 11 chr20 14855099 14855479 -51812526 - MLT1J2 LTR MaLR -34 416 6 284 221 171 76 chr20 14855748 14855906 -51812099 - L2 LINE L2 -2 3270 3098 675 251 154 9 chr20 14856038 14856265 -51811740 - MIR SINE MIR -1 261 2 195 344 11 11 chr20 14856489 14856556 -51811449 + MER5A DNA MER1_type 35 101 -88 766 167 86 40 chr20 14856556 14856730 -51811275 + MER5A DNA MER1_type 1 182 -7 774 246 0 11 chr20 14856732 14856911 -51811094 + MER5B DNA MER1_type 2 178 0 261 208 0 19 chr20 14856985 14857038 -51810967 + MER5A DNA MER1_type 136 187 -2 223 257 331 0 chr20 14857368 14857504 -51810501 - MER5A DNA MER1_type 0 189 9 182 186 23 23 chr20 14857518 14857561 -51810444 + L2 LINE L2 3271 3313 0 864 150 0 13 chr20 14857655 14857808 -51810197 - FRAM SINE Alu 0 40 1 617 218 39 19 chr20 14858609 14858765 -51809240 + MIR SINE MIR 35 193 -69 375 241 159 52 chr20 14859594 14859633 -51808372 - MLT1H LTR MaLR 0 549 516 1687 179 0 28 chr20 14859633 14859952 -51808053 + AluJo SINE Alu 1 310 -2 375 241 159 52 chr20 14859952 14860349 -51807656 - MLT1H LTR MaLR -33 516 27 2548 114 25 11 chr20 14861746 14862105 -51805900 - THE1B LTR MaLR 0 364 1 569 292 34 61 chr20 14862112 14862376 -51805629 + L2 LINE L2 3054 3310 -3 831 210 101 33 chr20 14862419 14862759 -51805246 - MLT1H1 LTR MaLR 0 555 191 2261 92 0 10 chr20 14863410 14863702 -51804303 - AluSg SINE Alu -9 301 13 283 241 241 19 chr20 14864152 14864260 -51803745 + MER58C DNA MER1_type 1 132 -83 279 79 0 0 chr20 14864277 14864315 -51803690 + (GGA)n Simple_repeat Simple_repeat 1 38 0 371 284 21 0 chr20 14864315 14864410 -51803595 + MER58C DNA MER1_type 119 215 0 316 276 13 33 chr20 14864877 14864997 -51803008 + GA-rich Low_complexity Low_complexity 2 120 -30 2425 60 0 29 chr20 14864997 14865311 -51802694 + AluY SINE Alu 2 306 -5 316 276 13 33 chr20 14865311 14865342 -51802663 + GA-rich Low_complexity Low_complexity 120 150 0 846 287 36 8 chr20 14865348 14865595 -51802410 - MIR SINE MIR -1 261 8 527 279 94 10 chr20 14866472 14866673 -51801332 - MIR SINE MIR -43 219 2 2412 60 0 38 chr20 14867543 14867857 -51800148 + AluY SINE Alu 1 302 -9 2424 100 0 0 chr20 14868322 14868632 -51799373 + AluSq SINE Alu 3 312 -1 374 251 112 58 chr20 14868670 14868893 -51799112 - Charlie8 DNA MER1_type -2218 199 29 452 224 9 9 chr20 14869208 14869315 -51798690 - LTR33 LTR ERVL 0 521 415 588 255 26 13 chr20 14869420 14869573 -51798432 - MIR SINE MIR -70 192 38 521 246 88 92 chr20 14870198 14870577 -51797428 - LTR16B LTR ERVL -15 449 1 325 289 147 15 chr20 14870796 14871000 -51797005 + LTR16C LTR ERVL 11 241 -250 2535 161 77 82 chr20 14871004 14871366 -51796639 - MER92B LTR ERV1 -5 631 272 2012 133 0 0 chr20 14871366 14871644 -51796361 + AluSg SINE Alu 1 278 -32 2535 161 77 82 chr20 14871644 14871914 -51796091 - MER92B LTR ERV1 -364 272 2 954 206 79 9 chr20 14871914 14872141 -51795864 + LTR16C LTR ERVL 249 491 0 772 294 40 43 chr20 14872179 14872505 -51795500 - MER102b DNA MER1_type -12 329 5 2197 97 0 55 chr20 14872714 14873044 -51794961 - AluSx SINE Alu 0 312 1 227 229 134 40 chr20 14873102 14873310 -51794695 + L1MC4 LINE L1 7781 8042 0 2059 135 7 0 chr20 14875827 14876115 -51791890 - AluSx SINE Alu -20 292 3 394 312 13 13 chr20 14876261 14876418 -51791587 + L3 LINE CR1 1315 1471 -106 435 252 37 30 chr20 14877698 14877833 -51790172 - MIR SINE MIR -109 153 18 198 348 56 0 chr20 14878226 14878315 -51789690 + MIR SINE MIR 9 102 -160 369 252 271 0 chr20 14878325 14878476 -51789529 - L2 LINE L2 0 3313 3122 941 258 128 34 chr20 14878508 14878915 -51789090 - MLT1J2 LTR MaLR -3 447 3 1339 262 23 67 chr20 14879127 14879608 -51788397 + LTR16C LTR ERVL 32 491 0 21 71 0 0 chr20 14879643 14879685 -51788320 + AT_rich Low_complexity Low_complexity 1 42 0 431 249 179 0 chr20 14879826 14879999 -51788006 - MER5C DNA MER1_type -120 204 1 191 36 36 0 chr20 14881124 14881152 -51786853 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 228 122 0 0 chr20 14881193 14881234 -51786771 + (A)n Simple_repeat Simple_repeat 1 41 0 573 164 0 82 chr20 14881910 14882044 -51785961 - L1ME3A LINE L1 -5 6165 6043 514 187 157 8 chr20 14882044 14882178 -51785827 + L1ME1 LINE L1 6011 6164 -2 1615 256 60 17 chr20 14882198 14882678 -51785327 - L1ME3A LINE L1 -149 6021 5521 195 358 63 0 chr20 14882771 14882866 -51785139 - L2 LINE L2 -28 3244 3144 290 286 9 9 chr20 14883167 14883272 -51784733 + L1ME LINE L1 5711 5810 -354 1990 174 6 14 chr20 14883353 14883710 -51784295 + MLT1A1 LTR MaLR 12 365 0 7975 167 28 17 chr20 14883928 14885540 -51782465 + L1MA7 LINE L1 3866 5460 -831 2404 83 0 0 chr20 14885540 14885830 -51782175 + AluSq SINE Alu 1 290 -23 613 0 26 0 chr20 14885835 14885912 -51782093 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 7975 167 28 17 chr20 14885912 14886696 -51781309 + L1MA7 LINE L1 5463 6290 -1 267 243 174 23 chr20 14887372 14887519 -51780486 - MIR SINE MIR -42 166 6 231 283 17 0 chr20 14887810 14887870 -51780135 + L1MC1 LINE L1 19 79 -6347 2460 137 25 18 chr20 14887890 14888283 -51779722 + MER57A LTR ERV1 8 403 0 8337 213 54 40 chr20 14888283 14892765 -51775240 + L1MC1 LINE L1 739 5589 -1024 243 0 0 0 chr20 14892765 14892792 -51775213 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 8337 213 54 40 chr20 14892792 14893828 -51774177 + L1MC1 LINE L1 5589 6608 -5 245 250 14 0 chr20 14895057 14895129 -51772876 - LTR67 LTR ERVL -19 538 466 1170 251 132 54 chr20 14895179 14895545 -51772460 - MLT1J LTR MaLR 0 511 108 1932 151 0 10 chr20 14895545 14895844 -51772161 + AluSx SINE Alu 1 296 -16 1170 251 132 54 chr20 14895844 14895887 -51772118 - MLT1J LTR MaLR -403 108 70 346 238 0 82 chr20 14896198 14896320 -51771685 + L2 LINE L2 3200 3311 -2 790 226 25 95 chr20 14896466 14896709 -51771296 + MIR SINE MIR 23 248 -14 386 308 0 0 chr20 14899438 14899529 -51768476 - MIR3 SINE MIR -25 183 93 2799 208 21 74 chr20 14900585 14901340 -51766665 - L1ME1 LINE L1 -150 6016 5301 10131 122 15 6 chr20 14901340 14903604 -51764401 + L1PA11 LINE L1 3889 6169 -5 27 62 0 0 chr20 14903608 14903656 -51764349 + AT_rich Low_complexity Low_complexity 1 48 0 4448 232 75 32 chr20 14903676 14903781 -51764224 - L1ME1 LINE L1 -1662 4484 4385 2145 156 42 39 chr20 14903781 14904166 -51763839 + MLT1B LTR MaLR 5 390 0 4448 232 75 32 chr20 14904166 14904587 -51763418 - L1ME1 LINE L1 -1761 4385 3984 2034 138 7 7 chr20 14904587 14904883 -51763122 - AluSx SINE Alu -16 296 1 4448 232 75 32 chr20 14904883 14905832 -51762173 - L1ME1 LINE L1 -2162 3984 2944 252 49 24 73 chr20 14906314 14906355 -51761650 + MLT1K LTR MaLR 550 588 0 234 308 0 0 chr20 14906431 14906483 -51761522 + L2 LINE L2 3148 3199 -73 4839 185 89 16 chr20 14906850 14907814 -51760191 - MER45B DNA AcHobo -2 1038 4 718 315 151 28 chr20 14909371 14909953 -51758052 + HAL1 LINE L1 2 690 -1817 390 21 0 0 chr20 14909953 14910000 -51758005 + (CA)n Simple_repeat Simple_repeat 1 47 0 718 315 151 28 chr20 14910000 14910132 -51757873 + HAL1 LINE L1 690 804 -1703 1084 238 106 36 chr20 14910207 14910762 -51757243 + HAL1 LINE L1 923 1516 -991 1092 196 60 16 chr20 14910801 14911051 -51756954 + MER45C DNA AcHobo 1 261 -692 782 251 146 14 chr20 14911128 14911347 -51756658 + MER45C DNA AcHobo 706 953 0 189 364 105 25 chr20 14911770 14911932 -51756073 + L3b LINE CR1 1406 1580 -3 4289 113 57 0 chr20 14912582 14913182 -51754823 - MER41B LTR ERV1 -1 634 1 225 211 0 0 chr20 14913539 14913596 -51754409 + (CA)n Simple_repeat Simple_repeat 2 58 0 438 274 161 66 chr20 14914681 14915060 -51752945 + MLT1L LTR MaLR 96 614 -1 973 152 15 20 chr20 14915153 14915350 -51752655 - L1MA4 LINE L1 0 6300 6105 257 305 219 0 chr20 14915515 14915620 -51752385 - MIR SINE MIR -115 147 20 489 281 98 15 chr20 14915980 14916183 -51751822 + MIR SINE MIR 12 231 -31 1360 193 141 75 chr20 14916305 14916787 -51751218 - MLT1H LTR MaLR -27 522 9 230 28 0 56 chr20 14918192 14918228 -51749777 + (CCCCCG)n Simple_repeat Simple_repeat 2 35 0 186 43 0 0 chr20 14918906 14918929 -51749076 + (CA)n Simple_repeat Simple_repeat 1 23 0 231 36 0 0 chr20 14920545 14920573 -51747432 + (A)n Simple_repeat Simple_repeat 1 28 0 2304 93 0 10 chr20 14922185 14922486 -51745519 + AluSx SINE Alu 1 298 -14 701 184 159 75 chr20 14922611 14922812 -51745193 + MER20 DNA MER1_type 1 218 -1 1523 247 49 33 chr20 14924286 14924499 -51743506 + L1ME1 LINE L1 4184 4392 -1754 1625 185 63 0 chr20 14924499 14924785 -51743220 + AluJb SINE Alu 3 306 -6 1523 247 49 33 chr20 14924785 14925145 -51742860 + L1ME1 LINE L1 4392 4766 -1380 482 194 111 7 chr20 14925145 14925289 -51742716 + L1ME1 LINE L1 5148 5306 -840 27 61 0 15 chr20 14925304 14925329 -51742676 + AT_rich Low_complexity Low_complexity 1 25 -40 1502 158 4 49 chr20 14925329 14925595 -51742410 - AluJo SINE Alu -24 288 35 27 61 0 15 chr20 14925595 14925635 -51742370 + AT_rich Low_complexity Low_complexity 25 65 0 2739 234 92 13 chr20 14925645 14926409 -51741596 + L1ME1 LINE L1 5325 6148 -18 1045 195 24 10 chr20 14926453 14926658 -51741347 + MER3 DNA MER1_type 1 208 -1 2068 124 7 0 chr20 14926796 14927094 -51740911 + AluSx SINE Alu 1 300 -12 1726 159 10 45 chr20 14927586 14927895 -51740110 + AluJo SINE Alu 4 301 -11 232 241 80 18 chr20 14927943 14928055 -51739950 + MER113 DNA MER1_type? 18 136 -385 2103 284 138 26 chr20 14928408 14929809 -51738196 + HAL1 LINE L1 780 2336 -171 283 185 173 49 chr20 14931092 14931173 -51736832 + MER110A LTR ERV1 80 170 -298 858 279 43 8 chr20 14931289 14931547 -51736458 + MER110 LTR ERV1 225 491 0 212 259 266 19 chr20 14931638 14931796 -51736209 - L2 LINE L2 0 3313 3117 1060 216 94 25 chr20 14932178 14932497 -51735508 + L1ME1 LINE L1 5551 5891 -273 3669 58 0 7 chr20 14932508 14932959 -51735046 + LTR7 LTR ERV1 1 448 -2 2910 132 46 61 chr20 14932961 14933776 -51734229 + HERVH LTR ERV1 1 767 -6946 * 8452 88 15 16 chr20 14933771 14934995 -51733010 + HERVH LTR ERV1 1773 2995 -4718 949 140 7 0 chr20 14934974 14935124 -51732881 + HERVH LTR ERV1 3140 3290 -4423 * 3312 119 6 6 chr20 14935114 14935616 -51732389 + HERVH LTR ERV1 3492 3993 -3720 4197 137 20 3 chr20 14935618 14936269 -51731736 + HERVH LTR ERV1 4488 5149 -2564 1374 132 18 14 chr20 14936270 14936489 -51731516 + HERVH LTR ERV1 5600 5819 -1894 * 2378 87 46 14 chr20 14936487 14936854 -51731151 + HERVH LTR ERV1 7322 7700 -13 457 188 197 8 chr20 14936854 14936867 -51731138 + L1ME1 LINE L1 5877 5886 -280 3714 58 0 7 chr20 14936867 14937318 -51730687 + LTR7 LTR ERV1 1 448 -2 457 188 197 8 chr20 14937318 14937421 -51730584 + L1ME1 LINE L1 5886 6015 -151 270 0 0 0 chr20 14937437 14937467 -51730538 + (TA)n Simple_repeat Simple_repeat 2 31 0 315 243 81 0 chr20 14937469 14937543 -51730462 + MER21B LTR ERV1 26 105 -758 241 256 47 23 chr20 14937560 14937646 -51730359 + MER21B LTR ERV1 19 106 -757 * 278 257 43 14 chr20 14937644 14937714 -51730291 + MER21B LTR ERV1 19 90 -773 2525 233 88 46 chr20 14937716 14938503 -51729502 + MER21B LTR ERV1 43 862 -1 1703 306 121 25 chr20 14939860 14941052 -51726953 - L2 LINE L2 -1 3312 2004 192 111 0 0 chr20 14941496 14941532 -51726473 + (CA)n Simple_repeat Simple_repeat 2 37 0 228 272 86 0 chr20 14942923 14943004 -51725001 - L2 LINE L2 -1 3312 3225 309 167 143 36 chr20 14943107 14943191 -51724814 - LTR16C LTR ERVL -249 242 150 2172 136 0 0 chr20 14943792 14944087 -51723918 + AluSx SINE Alu 1 295 -17 1114 213 33 0 chr20 14944456 14944667 -51723338 + L1MDa LINE L1 9 226 -6314 1047 205 51 0 chr20 14944666 14944920 -51723085 + L1MDa LINE L1 1085 1351 -5192 * 1177 136 11 16 chr20 14945214 14945398 -51722607 + MLT1B LTR MaLR 1 183 -207 4815 250 26 4 chr20 14945399 14946735 -51721270 - L1MEc LINE L1 -2598 3617 2252 705 248 157 44 chr20 14946741 14947135 -51720870 + MLT2D LTR ERVL 27 486 -34 261 197 0 0 chr20 14947154 14947215 -51720790 + (TA)n Simple_repeat Simple_repeat 2 62 0 655 269 56 69 chr20 14947248 14947783 -51720222 - L1MEc LINE L1 -4134 2262 1735 2522 219 59 70 chr20 14947814 14948978 -51719027 - L1M4c LINE L1 -4451 2687 1379 2465 67 0 3 chr20 14948978 14949276 -51718729 - AluY SINE Alu -14 297 1 2522 219 59 70 chr20 14949276 14949695 -51718310 - L1M4c LINE L1 -5759 1379 957 201 39 0 0 chr20 14949702 14949728 -51718277 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 33209 107 10 55 chr20 14949729 14956156 -51711849 - L1PA7 LINE L1 -17 6137 12 2006 232 129 48 chr20 14956165 14956962 -51711043 - L1M4c LINE L1 -5897 962 6 1901 161 3 0 chr20 14956993 14957279 -51710726 + AluJb SINE Alu 1 287 -25 434 286 71 6 chr20 14957294 14957476 -51710529 - L1M4 LINE L1 -1119 5027 4834 1092 240 149 24 chr20 14957491 14958055 -51709950 - L2 LINE L2 -190 3123 2459 661 232 133 87 chr20 14958061 14958529 -51709476 + MLT1H LTR MaLR 20 549 0 369 234 43 0 chr20 14958529 14958623 -51709382 - L2 LINE L2 -852 2462 2365 1080 279 100 8 chr20 14960217 14960568 -51707437 - LTR16C LTR ERVL 0 491 109 29 28 0 0 chr20 14961019 14961055 -51706950 + AT_rich Low_complexity Low_complexity 1 36 0 229 244 0 0 chr20 14961187 14961232 -51706773 + CT-rich Low_complexity Low_complexity 2 46 0 4185 141 31 14 chr20 14961489 14961813 -51706192 - L1PA15 LINE L1 0 6165 5848 2282 92 23 7 chr20 14961813 14962117 -51705888 - AluSq SINE Alu -4 309 1 4185 141 31 14 chr20 14962117 14962438 -51705567 - L1PA15 LINE L1 -317 5848 5509 185 224 17 0 chr20 14964739 14964797 -51703208 + (CA)n Simple_repeat Simple_repeat 2 60 0 444 330 0 0 chr20 14965260 14965378 -51702627 - L2 LINE L2 -6 3266 3149 2519 65 0 3 chr20 14966314 14966624 -51701381 + AluY SINE Alu 1 309 -2 1905 85 9 91 chr20 14968627 14968957 -51699048 + AluSx SINE Alu 1 303 -9 2428 67 0 7 chr20 14968957 14969254 -51698751 + AluY SINE Alu 1 295 -16 2278 97 7 7 chr20 14970318 14970627 -51697378 - AluSc SINE Alu 0 309 1 203 246 31 46 chr20 14971129 14971194 -51696811 + MIR3 SINE MIR 138 201 -7 220 352 48 32 chr20 14972040 14972165 -51695840 - MIR3 SINE MIR -67 141 15 384 347 24 42 chr20 14972310 14972477 -51695528 + MIR3 SINE MIR 33 196 -12 405 291 17 26 chr20 14973237 14973354 -51694651 + L2 LINE L2 2044 2159 -1155 3835 271 114 7 chr20 14973431 14974870 -51693135 + L2 LINE L2 1699 3307 -6 437 268 46 13 chr20 14975648 14975801 -51692204 - Charlie8 DNA MER1_type -2139 278 121 30 97 0 0 chr20 14975803 14975896 -51692109 + AT_rich Low_complexity Low_complexity 1 93 0 193 352 0 0 chr20 14976028 14976082 -51691923 - L2 LINE L2 -2 3270 3217 330 283 115 9 chr20 14978179 14978292 -51689713 - MIR SINE MIR -126 136 12 1228 168 14 14 chr20 14978316 14978530 -51689475 + AluJo SINE Alu 89 302 -10 860 209 74 42 chr20 14978569 14978852 -51689153 - L1ME2 LINE L1 -6 6158 5867 1724 166 10 24 chr20 14978947 14979237 -51688768 + AluJo SINE Alu 1 286 -26 22 0 0 0 chr20 14980162 14980184 -51687821 + AT_rich Low_complexity Low_complexity 1 22 0 2123 95 0 40 chr20 14980188 14980484 -51687521 - AluSc SINE Alu -25 284 1 1200 234 55 30 chr20 14980687 14981290 -51686715 - L1M4 LINE L1 -1375 4771 3950 2479 69 7 0 chr20 14981290 14981594 -51686411 - AluY SINE Alu -5 306 1 1200 234 55 30 chr20 14981594 14981711 -51686294 - L1M4 LINE L1 -2196 3950 3837 * 4698 161 49 5 chr20 14981708 14982932 -51685073 - L1MB7 LINE L1 -9 6175 4905 1291 263 118 31 chr20 14982933 14984170 -51683835 - L1M4 LINE L1 -2293 3853 2315 5883 187 38 9 chr20 14984322 14986265 -51681740 - L1MA4A LINE L1 -7 6296 4295 891 286 21 33 chr20 14986730 14987157 -51680848 - L1MCc LINE L1 -5982 441 20 188 270 130 20 chr20 14987594 14987694 -51680311 - MIR SINE MIR -63 145 35 209 302 19 94 chr20 14987899 14988005 -51680000 + L2 LINE L2 3171 3268 -4 2071 237 69 34 chr20 14988351 14989122 -51678883 - L1MC4 LINE L1 0 8042 7245 28 29 0 0 chr20 14989703 14989738 -51678267 + AT_rich Low_complexity Low_complexity 1 35 0 1115 144 72 0 chr20 14990666 14990861 -51677144 - MER3 DNA MER1_type 0 209 1 204 40 0 0 chr20 14992509 14992534 -51675471 + (CA)n Simple_repeat Simple_repeat 1 25 0 2208 115 3 0 chr20 14992544 14992840 -51675165 - AluSq SINE Alu -16 297 1 3855 202 90 60 chr20 14992840 14994068 -51673937 + L1MC4 LINE L1 6779 8042 0 23 68 0 0 chr20 14994811 14994855 -51673150 + AT_rich Low_complexity Low_complexity 1 44 0 186 369 46 23 chr20 14995376 14995506 -51672499 - MIR SINE MIR -128 134 2 1741 131 139 0 chr20 14995729 14996003 -51672002 - AluSx SINE Alu 0 312 1 500 234 94 55 chr20 14996040 14996387 -51671618 + L1MC4a LINE L1 5190 5543 -743 714 231 17 6 chr20 14996407 14996580 -51671425 + MER82 DNA MER2_type 7 181 -472 2052 58 8 8 chr20 14996582 14996843 -51671162 - AluY SINE Alu -12 299 39 30 45 0 0 chr20 14996852 14996896 -51671109 + AT_rich Low_complexity Low_complexity 1 44 0 2061 225 16 5 chr20 14997150 14997599 -51670406 + MER82 DNA MER2_type 200 653 0 622 247 103 8 chr20 14997599 14997842 -51670163 + L1MC4a LINE L1 5584 5849 -1959 309 239 73 58 chr20 14997933 14998138 -51669867 + MER112 DNA MER1_type 52 259 -1 22 0 0 0 chr20 15004100 15004122 -51663883 + AT_rich Low_complexity Low_complexity 1 22 0 363 98 0 0 chr20 15004234 15004295 -51663710 + (TG)n Simple_repeat Simple_repeat 1 61 0 2211 206 63 11 chr20 15004857 15005377 -51662628 - MLT1F1 LTR MaLR -2 565 19 188 214 24 0 chr20 15005405 15005447 -51662558 + L3 LINE CR1 1534 1576 -1 2424 140 40 35 chr20 15006274 15006696 -51661309 + MSTC LTR MaLR 1 424 -4 2409 71 0 6 chr20 15007605 15007927 -51660078 - L1PA7 LINE L1 -1 6153 5834 189 0 0 0 chr20 15008149 15008170 -51659835 + (A)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr20 15008466 15008487 -51659518 + AT_rich Low_complexity Low_complexity 1 21 0 1233 220 37 24 chr20 15008487 15008896 -51659109 + L1ME3A LINE L1 5754 6167 -3 212 247 153 0 chr20 15008981 15009066 -51658939 - MER91A DNA MER1_type -35 161 64 193 308 57 63 chr20 15009125 15009284 -51658721 - MIR SINE MIR -69 193 36 507 246 60 96 chr20 15010527 15010893 -51657112 + HAL1 LINE L1 3 355 -2152 472 195 13 87 chr20 15010952 15011101 -51656904 + MER58C DNA MER1_type 78 215 0 435 318 101 16 chr20 15011150 15011408 -51656597 + HAL1 LINE L1 418 697 -1810 8543 25 0 0 chr20 15011642 15012691 -51655314 + L1PA4 LINE L1 3645 4693 -1453 7458 36 2 0 chr20 15012704 15014296 -51653709 + L1PA4 LINE L1 4562 6155 0 7469 38 0 0 chr20 15013398 15014298 -51653707 + L1PA4 LINE L1 5256 6155 0 2560 244 55 22 chr20 15014367 15015270 -51652735 + HAL1 LINE L1 1147 2121 -386 332 195 103 23 chr20 15015351 15015438 -51652567 - MIR SINE MIR -74 188 95 584 263 210 18 chr20 15015877 15016215 -51651790 - L2 LINE L2 0 3313 2911 529 329 14 18 chr20 15016311 15016530 -51651475 - L2 LINE L2 -645 2669 2452 434 83 14 0 chr20 15016883 15016955 -51651050 + (CA)n Simple_repeat Simple_repeat 1 73 0 1747 119 0 35 chr20 15017009 15017269 -51650736 + AluSg1 SINE Alu 28 278 -31 228 35 0 0 chr20 15017273 15017302 -51650703 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 190 279 59 0 chr20 15017589 15017657 -51650348 + MIR SINE MIR 118 189 -73 308 275 127 49 chr20 15018591 15018733 -51649272 + MIR3 SINE MIR 20 172 -36 23 0 0 0 chr20 15019175 15019198 -51648807 + AT_rich Low_complexity Low_complexity 1 23 0 284 321 30 48 chr20 15020679 15020847 -51647158 - L2 LINE L2 -177 3136 2972 1201 281 59 47 chr20 15021408 15021982 -51646023 - L1MC4a LINE L1 -1897 5911 5331 299 233 44 37 chr20 15021982 15022126 -51645879 + MLT1L LTR MaLR 1 156 -355 262 278 96 70 chr20 15022191 15022378 -51645627 + MLT1J LTR MaLR 265 456 -55 391 326 36 32 chr20 15022424 15022957 -51645048 - L1MC4a LINE L1 -813 5333 4799 13158 140 49 32 chr20 15024594 15026948 -51641057 - Tigger1 DNA MER2_type -1 2417 24 204 200 18 18 chr20 15027143 15027198 -51640807 + (TA)n Simple_repeat Simple_repeat 2 56 0 372 221 91 0 chr20 15027227 15027304 -51640701 + L2 LINE L2 3230 3313 0 396 322 86 82 chr20 15028277 15028984 -51639021 - L2 LINE L2 -1 3312 2600 7685 106 22 90 chr20 15029919 15031311 -51636694 + HSMAR2 DNA Mariner 4 1301 -1 188 0 74 0 chr20 15031417 15031444 -51636561 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 2725 48 0 0 chr20 15031579 15031912 -51636093 + L1PA6 LINE L1 5822 6154 0 232 103 0 0 chr20 15032239 15032278 -51635727 - L1PA16 LINE L1 -2 6164 6126 2069 121 27 3 chr20 15032972 15033269 -51634736 - AluSq SINE Alu -9 304 1 4987 260 148 22 chr20 15033609 15036092 -51631913 + L2 LINE L2 510 3307 -6 1230 217 5 0 chr20 15036151 15036372 -51631633 - MER58A DNA MER1_type 0 224 3 842 195 0 6 chr20 15036868 15037027 -51630978 + MER3 DNA MER1_type 48 205 -4 252 167 0 0 chr20 15037265 15037313 -51630692 + L1MB2 LINE L1 4323 4370 -1776 4288 189 41 15 chr20 15037343 15038715 -51629290 + L1MB2 LINE L1 4329 5732 -451 2282 145 10 21 chr20 15038733 15039120 -51628885 + MLT1B LTR MaLR 8 390 0 2313 144 16 55 chr20 15039121 15039516 -51628489 + L1MB2 LINE L1 5732 6108 -63 1674 164 3 54 chr20 15039516 15039833 -51628172 + AluJo SINE Alu 8 308 -4 2313 144 16 55 chr20 15039833 15039888 -51628117 + L1MB2 LINE L1 6108 6164 -7 3801 186 54 49 chr20 15039922 15040835 -51627170 + L1MD2 LINE L1 5443 6359 0 1837 150 14 0 chr20 15041093 15041373 -51626632 + AluSg SINE Alu 1 284 -26 319 279 101 53 chr20 15041680 15041802 -51626203 - L1MC4 LINE L1 -17 8025 7910 328 39 20 20 chr20 15041802 15041853 -51626152 + (CA)n Simple_repeat Simple_repeat 2 52 0 319 279 101 53 chr20 15041853 15042067 -51625938 - L1MC4 LINE L1 -132 7910 7673 2114 141 3 0 chr20 15042363 15042675 -51625330 + AluSq SINE Alu 1 313 0 1887 140 0 0 chr20 15044425 15044703 -51623302 - AluSx SINE Alu 0 312 35 535 278 117 5 chr20 15045662 15045867 -51622138 - L2 LINE L2 -76 3237 3010 1480 132 4 4 chr20 15046335 15046562 -51621443 + L1P3 LINE L1 10 236 -6225 7181 47 0 2 chr20 15046565 15048117 -51619888 + L1PA6 LINE L1 4586 6143 -11 1688 192 0 10 chr20 15048419 15048726 -51619279 + AluJo SINE Alu 1 304 -8 5493 115 15 19 chr20 15048752 15049627 -51618378 - L1PB2 LINE L1 -2 6149 5279 321 261 160 37 chr20 15049982 15050170 -51617835 - L1ME LINE L1 -402 5760 5550 2272 111 0 3 chr20 15050241 15050548 -51617457 + AluSx SINE Alu 1 306 -6 1416 119 0 5 chr20 15050554 15050783 -51617222 + AluSq SINE Alu 91 318 0 276 357 67 5 chr20 15050784 15050994 -51617011 - L1MEd LINE L1 -5336 783 561 278 244 8 81 chr20 15051005 15051128 -51616877 - L1MEd LINE L1 -6004 115 2 248 352 62 39 chr20 15051192 15051320 -51616685 + L2 LINE L2 3137 3267 -5 489 92 0 0 chr20 15052776 15052841 -51615164 + HSMAR1 DNA Mariner 1219 1283 -4 2895 129 61 0 chr20 15052841 15052975 -51615030 + L1PB4 LINE L1 5635 5759 -397 252 0 0 0 chr20 15052975 15053003 -51615002 + (CA)n Simple_repeat Simple_repeat 2 29 0 2895 129 61 0 chr20 15053003 15053358 -51614647 + L1PB4 LINE L1 5759 6154 -2 561 130 191 0 chr20 15053358 15053473 -51614532 + L1MCa LINE L1 2175 2311 -4115 21 36 0 0 chr20 15053879 15053907 -51614098 + AT_rich Low_complexity Low_complexity 1 28 0 740 118 0 55 chr20 15054092 15054203 -51613802 - AluSg/x SINE Alu -14 298 193 1505 104 0 5 chr20 15054203 15054404 -51613601 - AluSq SINE Alu -93 220 21 740 118 0 55 chr20 15054404 15054419 -51613586 - AluSg/x SINE Alu -119 193 179 416 265 81 81 chr20 15054463 15054648 -51613357 - MIR3 SINE MIR -1 207 23 22 0 0 0 chr20 15054977 15054999 -51613006 + AT_rich Low_complexity Low_complexity 1 22 0 6976 120 34 4 chr20 15055441 15057249 -51610756 - L1MA2 LINE L1 0 6304 4440 6730 68 2 14 chr20 15058358 15059081 -51608924 + L1PA7 LINE L1 5063 5772 -382 2084 119 13 6 chr20 15059081 15059392 -51608613 + AluSq SINE Alu 1 313 0 6730 68 2 14 chr20 15059392 15059764 -51608241 + L1PA7 LINE L1 5772 6147 -7 1187 255 50 30 chr20 15061002 15061477 -51606528 + L1MC5 LINE L1 6881 7365 -596 * 1340 201 22 4 chr20 15061469 15061737 -51606268 + L1M4 LINE L1 3996 4268 -1878 807 237 59 5 chr20 15062429 15062615 -51605390 - MER58C DNA MER1_type -19 196 1 404 286 86 71 chr20 15062655 15063146 -51604859 + L1MEd LINE L1 1042 1574 -4736 1281 252 114 11 chr20 15063159 15063624 -51604381 + L2 LINE L2 612 1124 -2190 381 264 135 7 chr20 15063625 15063773 -51604232 - MLT1I LTR MaLR -1 408 242 207 162 0 0 chr20 15064150 15064187 -51603818 + A-rich Low_complexity Low_complexity 1 37 0 816 110 15 7 chr20 15064382 15064518 -51603487 - L1MB3 LINE L1 -21 6162 6026 328 177 16 0 chr20 15064509 15064571 -51603434 - L1MB3 LINE L1 -366 5802 5740 * 526 254 182 10 chr20 15065351 15065560 -51602445 + MIR SINE MIR 5 249 -13 1762 204 33 82 chr20 15067906 15068416 -51599589 + MLT2B3 LTR ERVL 70 554 0 236 253 145 36 chr20 15068831 15068914 -51599091 + MIR SINE MIR 62 153 -55 199 300 0 57 chr20 15069237 15069307 -51598698 - MIR3 SINE MIR -135 73 8 28 0 0 0 chr20 15069760 15069788 -51598217 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr20 15070390 15070417 -51597588 + AT_rich Low_complexity Low_complexity 1 27 0 2236 104 0 3 chr20 15070683 15070981 -51597024 - AluSx SINE Alu -13 299 3 413 235 28 123 chr20 15071073 15071324 -51596681 + L1MC4a LINE L1 6687 6920 -888 475 330 89 38 chr20 15071378 15071805 -51596200 + L1MCc LINE L1 19 467 -5956 5242 118 29 36 chr20 15072273 15072946 -51595059 + L1PA16 LINE L1 4650 5326 -840 1824 140 54 0 chr20 15072946 15072960 -51595045 - AluSg SINE Alu -16 294 282 432 0 0 0 chr20 15072960 15073008 -51594997 + (TG)n Simple_repeat Simple_repeat 1 48 0 1824 140 54 0 chr20 15073008 15073272 -51594733 - AluSg SINE Alu -28 282 1 5242 118 29 36 chr20 15073272 15074101 -51593904 + L1PA16 LINE L1 5326 6166 0 645 256 105 32 chr20 15074164 15074383 -51593622 + MLT1L LTR MaLR 328 562 -53 2032 194 0 3 chr20 15074383 15074769 -51593236 + L1PB4 LINE L1 5770 6154 -2 239 191 15 15 chr20 15074812 15074866 -51593139 + (TA)n Simple_repeat Simple_repeat 1 57 -11 189 74 0 0 chr20 15074866 15074893 -51593112 + (TG)n Simple_repeat Simple_repeat 2 28 0 239 191 15 15 chr20 15074893 15074906 -51593099 + (TA)n Simple_repeat Simple_repeat 56 68 0 967 270 76 42 chr20 15074907 15076658 -51591347 + L1MCc LINE L1 1206 3275 -3666 216 184 0 69 chr20 15076665 15076752 -51591253 + (TAAA)n Simple_repeat Simple_repeat 2 82 0 495 250 31 21 chr20 15076768 15076960 -51591045 + L1MC5 LINE L1 6958 7151 -810 385 260 42 20 chr20 15076952 15077146 -51590859 + L1ME1 LINE L1 5753 5951 -219 * 13037 206 65 39 chr20 15077337 15081879 -51586126 + L1MA4 LINE L1 1 4427 -1937 1798 169 13 3 chr20 15081879 15082181 -51585824 + AluJo SINE Alu 1 305 -7 13037 206 65 39 chr20 15082181 15082979 -51585026 + L1MA4 LINE L1 4427 5203 -1161 1512 146 0 0 chr20 15082979 15083212 -51584793 + MER46A DNA MER2_type 4 236 0 13037 206 65 39 chr20 15083212 15083727 -51584278 + L1MA4 LINE L1 5203 5704 -660 198 0 0 0 chr20 15083727 15083749 -51584256 + (TGAA)n Simple_repeat Simple_repeat 3 24 0 351 0 0 0 chr20 15083753 15083792 -51584213 + (TG)n Simple_repeat Simple_repeat 1 39 0 13037 206 65 39 chr20 15083792 15084196 -51583809 + L1MA4 LINE L1 5706 6292 -72 255 187 0 110 chr20 15084193 15084248 -51583757 - L1P LINE L1 -1634 4512 4469 * 2153 111 13 7 chr20 15084248 15084554 -51583451 - AluSg SINE Alu -2 308 1 255 187 0 110 chr20 15084554 15084589 -51583416 - L1P LINE L1 -1677 4469 4432 942 88 51 0 chr20 15084589 15084726 -51583279 + L1PA15 LINE L1 6019 6162 -3 232 347 14 0 chr20 15085392 15085464 -51582541 + MIR SINE MIR 190 262 0 955 267 76 42 chr20 15085677 15086111 -51581894 + MLT1L LTR MaLR 159 607 -8 7099 50 7 0 chr20 15086229 15087747 -51580258 - L1PA5 LINE L1 0 6154 4637 192 158 0 26 chr20 15087849 15087887 -51580118 - L2 LINE L2 -4 3309 3273 186 43 0 0 chr20 15088030 15088053 -51579952 + (GGGA)n Simple_repeat Simple_repeat 3 25 0 461 243 186 7 chr20 15090035 15090175 -51577830 + MER5A DNA MER1_type 4 168 -21 207 0 0 0 chr20 15090177 15090200 -51577805 + (A)n Simple_repeat Simple_repeat 1 23 0 28 0 0 0 chr20 15090696 15090724 -51577281 + AT_rich Low_complexity Low_complexity 1 28 0 192 40 0 0 chr20 15091283 15091308 -51576697 + (T)n Simple_repeat Simple_repeat 1 25 0 3491 137 7 5 chr20 15093407 15093978 -51574027 + L1PA16 LINE L1 5594 6165 -1 13497 36 1 9 chr20 15094014 15096410 -51571595 + L1PA4 LINE L1 3753 6142 -13 210 37 0 0 chr20 15096410 15096437 -51571568 + (TTAAA)n Simple_repeat Simple_repeat 4 30 0 3434 271 69 20 chr20 15096467 15097829 -51570176 - L2 LINE L2 -157 3156 1723 1699 152 0 16 chr20 15098523 15098780 -51569225 + AluJo SINE Alu 29 281 -31 1140 256 70 34 chr20 15099288 15099702 -51568303 + HsTC2 DNA Tc2 1 429 -1469 489 196 27 0 chr20 15099691 15099803 -51568202 + HsTC2 DNA Tc2 1786 1900 0 * 339 282 241 11 chr20 15099807 15099981 -51568024 - MIR SINE MIR -16 246 33 26 0 0 0 chr20 15101130 15101156 -51566849 + AT_rich Low_complexity Low_complexity 1 26 0 264 122 0 0 chr20 15102233 15102274 -51565731 + (CA)n Simple_repeat Simple_repeat 1 41 0 2192 113 10 3 chr20 15102568 15102878 -51565127 + AluSx SINE Alu 1 312 0 353 326 86 11 chr20 15103486 15103661 -51564344 - MER5A DNA MER1_type -1 188 1 288 268 43 78 chr20 15104059 15104290 -51563715 + L1MC4a LINE L1 5670 5892 -1916 469 301 257 0 chr20 15104448 15104744 -51563261 - L3 LINE CR1 -28 1549 1178 249 236 18 0 chr20 15104879 15104934 -51563071 - L3 LINE CR1 -464 1113 1058 368 290 153 0 chr20 15105614 15105745 -51562260 + MIR SINE MIR 108 258 -4 440 321 52 9 chr20 15105754 15105966 -51562039 - MIR SINE MIR -34 228 8 1217 126 10 43 chr20 15106115 15106288 -51561717 - AluSx SINE Alu -6 304 127 204 40 0 0 chr20 15106288 15106313 -51561692 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1812 137 11 7 chr20 15106315 15106593 -51561412 - AluSx SINE Alu -33 279 1 1217 126 10 43 chr20 15106593 15106623 -51561382 - AluSx SINE Alu -184 126 105 725 118 27 0 chr20 15106724 15106834 -51561171 - AluSx SINE Alu -199 113 1 183 234 0 43 chr20 15107913 15107960 -51560045 - L2 LINE L2 0 3272 3228 276 273 231 8 chr20 15110749 15110870 -51557135 - MER5A DNA MER1_type -6 183 36 846 124 41 24 chr20 15111463 15111632 -51556373 - L1MA8 LINE L1 -6 6285 6114 2188 113 3 7 chr20 15112631 15112932 -51555073 - AluSq SINE Alu -13 300 1 2075 106 3 20 chr20 15113389 15113681 -51554324 + AluSx SINE Alu 1 287 -25 1078 201 5 0 chr20 15113987 15114206 -51553799 + AluJo SINE Alu 91 310 -2 2246 208 61 8 chr20 15114977 15115502 -51552503 + L1ME2 LINE L1 5599 6151 -13 280 241 139 32 chr20 15115663 15115821 -51552184 + L1MEd LINE L1 1314 1488 -4884 317 306 81 60 chr20 15115832 15116092 -51551913 + L1MEd LINE L1 1505 1857 -4525 599 294 71 20 chr20 15116116 15116371 -51551634 + L2 LINE L2 3046 3313 0 1468 108 0 19 chr20 15116486 15116700 -51551305 + AluSg/x SINE Alu 95 304 -6 1322 268 109 31 chr20 15116737 15117673 -51550332 + L1MEd LINE L1 2446 3454 -2928 204 118 29 0 chr20 15117846 15117880 -51550125 + C-rich Low_complexity Low_complexity 5 39 0 1834 150 3 10 chr20 15117945 15118238 -51549767 + AluSx SINE Alu 1 291 -21 223 367 33 0 chr20 15120704 15120794 -51547211 + L2 LINE L2 3169 3261 -11 384 248 139 36 chr20 15122443 15122580 -51545425 - L2 LINE L2 -3 3310 3160 242 350 58 19 chr20 15122705 15122965 -51545040 - L2 LINE L2 -446 2868 2599 221 308 98 30 chr20 15123099 15123232 -51544773 - L2 LINE L2 0 3313 3172 281 273 47 62 chr20 15123461 15123589 -51544416 + MER5B DNA MER1_type 52 177 -1 361 374 61 0 chr20 15123676 15123839 -51544166 - MIR3 SINE MIR -25 183 11 249 33 0 0 chr20 15124052 15124082 -51543923 + (TG)n Simple_repeat Simple_repeat 2 31 0 180 258 73 105 chr20 15124205 15124329 -51543676 + L3 LINE CR1 1337 1456 -121 384 22 0 0 chr20 15124770 15124815 -51543190 + (CA)n Simple_repeat Simple_repeat 2 46 0 365 309 0 0 chr20 15126561 15126671 -51541334 + L1MC5 LINE L1 7334 7443 -518 3820 173 115 68 chr20 15126697 15127582 -51540423 + Tigger6a DNA MER2_type 6 947 -650 1705 160 0 31 chr20 15127582 15127869 -51540136 - AluJo SINE Alu -30 282 5 3820 173 115 68 chr20 15127869 15128013 -51539992 + Tigger6a DNA MER2_type 947 1083 0 276 291 60 100 chr20 15128548 15128968 -51539037 + MLT1J LTR MaLR 109 606 -9 6026 146 12 17 chr20 15129211 15129730 -51538275 - Tigger1 DNA MER2_type 0 2418 1905 2407 85 0 0 chr20 15129730 15130035 -51537970 + AluSx SINE Alu 1 305 -7 6026 146 12 17 chr20 15130035 15130535 -51537470 - Tigger1 DNA MER2_type -513 1905 1404 826 281 66 96 chr20 15130724 15131662 -51536343 + L2 LINE L2 2365 3268 -45 1596 209 98 5 chr20 15131759 15132179 -51535826 + L1ME2 LINE L1 5669 6127 -37 1781 161 33 3 chr20 15132201 15132500 -51535505 - AluJb SINE Alu -4 308 1 418 224 0 0 chr20 15133053 15133151 -51534854 + Charlie5 DNA MER1_type 10 107 -2505 * 1154 169 59 98 chr20 15133146 15133553 -51534452 + Charlie5 DNA MER1_type 2226 2616 0 27 62 0 0 chr20 15133744 15133792 -51534213 + AT_rich Low_complexity Low_complexity 1 48 0 387 353 60 57 chr20 15133793 15134195 -51533810 + L1MEd LINE L1 16 418 -5701 516 305 95 61 chr20 15134232 15134819 -51533186 + L1MEd LINE L1 425 1031 -5088 3999 170 123 25 chr20 15135269 15135989 -51532016 + L1MB3 LINE L1 1247 2008 -4376 2080 137 0 3 chr20 15135989 15136295 -51531710 - AluSx SINE Alu -7 305 1 3999 170 123 25 chr20 15136295 15136554 -51531451 + L1MB3 LINE L1 2008 2240 -4144 6854 202 63 78 chr20 15136564 15137223 -51530782 + L1MB3 LINE L1 2865 3532 -2887 1967 155 7 0 chr20 15137223 15137519 -51530486 + AluJb SINE Alu 1 298 -14 6854 202 63 78 chr20 15137519 15137544 -51530461 + L1MB3 LINE L1 3532 3556 -2863 425 103 15 0 chr20 15137544 15137612 -51530393 + (TG)n Simple_repeat Simple_repeat 2 70 0 6854 202 63 78 chr20 15137612 15138297 -51529708 + L1MB3 LINE L1 3556 4250 -2169 903 111 0 22 chr20 15138297 15138432 -51529573 - FLAM_C SINE Alu 0 133 2 6854 202 63 78 chr20 15138432 15139348 -51528657 + L1MB3 LINE L1 4250 5178 -1241 2134 111 3 20 chr20 15139348 15139654 -51528351 + AluSx SINE Alu 1 301 -11 6854 202 63 78 chr20 15139654 15140985 -51527020 + L1MB3 LINE L1 5178 6419 0 1460 140 51 35 chr20 15140990 15141305 -51526700 + L1MD1 LINE L1 5675 5994 -248 * 5044 111 19 1 chr20 15141303 15142050 -51525955 + L1PA13 LINE L1 5385 6144 -19 534 285 116 12 chr20 15142060 15142379 -51525626 + HAL1 LINE L1 1231 1582 -925 524 234 105 29 chr20 15142393 15142602 -51525403 + HAL1 LINE L1 1722 1946 -561 1024 174 0 0 chr20 15142784 15142945 -51525060 - FRAM SINE Alu -20 156 1 30 45 0 0 chr20 15143031 15143075 -51524930 + AT_rich Low_complexity Low_complexity 1 44 0 387 302 130 12 chr20 15143121 15143459 -51524546 - L1ME4a LINE L1 -216 5905 5528 216 67 0 0 chr20 15143817 15143847 -51524158 + (TC)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr20 15145701 15145723 -51522282 + AT_rich Low_complexity Low_complexity 1 22 0 1365 277 81 42 chr20 15146081 15146860 -51521145 + L2 LINE L2 2495 3297 -16 2290 102 0 7 chr20 15147030 15147334 -51520671 + AluSx SINE Alu 1 302 -10 756 137 15 72 chr20 15147855 15148117 -51519888 + MLT1A1 LTR MaLR 19 356 -18 3614 242 54 51 chr20 15148296 15149615 -51518390 + L1MEc LINE L1 35 1357 -5039 1915 237 37 19 chr20 15149624 15149920 -51518085 + L1M4 LINE L1 3660 3949 -2197 2161 155 19 14 chr20 15149920 15150282 -51517723 + THE1B LTR MaLR 1 364 0 1915 237 37 19 chr20 15150282 15150558 -51517447 + L1M4 LINE L1 3949 4242 -1904 1895 119 37 0 chr20 15150558 15150826 -51517179 + AluSx SINE Alu 1 278 -34 370 143 0 0 chr20 15150835 15150891 -51517114 + (GGGGA)n Simple_repeat Simple_repeat 1 56 0 766 118 7 15 chr20 15150891 15151026 -51516979 + (GAAA)n Simple_repeat Simple_repeat 4 137 0 677 247 69 16 chr20 15151037 15151284 -51516721 + L1M4 LINE L1 4246 4505 -1641 261 280 20 0 chr20 15151291 15151391 -51516614 + L1M4 LINE L1 4587 4688 -1458 22 0 0 0 chr20 15151451 15151473 -51516532 + AT_rich Low_complexity Low_complexity 1 22 0 1380 221 40 48 chr20 15152072 15152443 -51515562 + MLT1A2 LTR MaLR 3 370 -4 367 289 100 31 chr20 15152456 15153051 -51514954 - L1MC/D LINE L1 -399 5779 5213 391 305 76 30 chr20 15153264 15153592 -51514413 - L1MC/D LINE L1 -1172 4974 4632 2149 65 61 0 chr20 15154000 15154279 -51513726 - AluY SINE Alu -15 296 1 305 302 80 80 chr20 15154633 15154792 -51513213 + L1MC5 LINE L1 7616 7777 -184 1982 147 0 3 chr20 15154792 15155105 -51512900 + AluJo SINE Alu 1 312 0 305 302 80 80 chr20 15155105 15155256 -51512749 + L1MC5 LINE L1 7776 7926 -35 21 0 0 0 chr20 15155611 15155632 -51512373 + AT_rich Low_complexity Low_complexity 1 21 0 236 269 0 0 chr20 15156308 15156360 -51511645 + (ATG)n Simple_repeat Simple_repeat 1 52 0 289 328 113 34 chr20 15156387 15156591 -51511414 - MIR SINE MIR -31 231 12 23 108 0 0 chr20 15156902 15156995 -51511010 + AT_rich Low_complexity Low_complexity 1 93 0 945 157 6 17 chr20 15157397 15157569 -51510436 + LTR41 LTR ERVL 1 170 -603 364 311 145 4 chr20 15157958 15158193 -51509812 + LTR41 LTR ERVL 500 767 -6 445 165 155 10 chr20 15158201 15158298 -51509707 + MIR SINE MIR 86 196 -66 254 270 0 0 chr20 15158364 15158427 -51509578 + MIR SINE MIR 149 211 -51 2019 108 11 18 chr20 15158428 15158735 -51509270 + AluSx SINE Alu 1 305 0 296 225 18 63 chr20 15159047 15159158 -51508847 + L1MC/D LINE L1 5326 5431 -2377 961 243 12 0 chr20 15159165 15159420 -51508585 + L1ME3 LINE L1 2593 2850 -3296 301 270 145 21 chr20 15159421 15159662 -51508343 + L1ME3 LINE L1 3367 3637 -2509 1667 229 82 99 chr20 15159684 15160481 -51507524 + L1ME3 LINE L1 4823 5632 -530 2070 119 0 0 chr20 15160481 15160759 -51507246 + AluSx SINE Alu 1 278 -34 423 106 0 0 chr20 15160759 15160825 -51507180 + Alu SINE Alu 238 303 -8 1667 229 82 99 chr20 15160825 15161319 -51506686 + L1ME3 LINE L1 5630 6155 -7 23 78 0 0 chr20 15161381 15161432 -51506573 + AT_rich Low_complexity Low_complexity 1 51 0 1071 271 77 14 chr20 15162039 15162467 -51505538 + L1M4 LINE L1 3562 4016 -2130 1292 202 4 4 chr20 15162472 15162715 -51505290 + AluJo SINE Alu 1 243 -69 4813 206 68 32 chr20 15162718 15162855 -51505150 + L1M4 LINE L1 4012 4143 -2003 865 74 15 7 chr20 15162855 15162990 -51505015 + (GGAA)n Simple_repeat Simple_repeat 3 138 0 4813 206 68 32 chr20 15162990 15163686 -51504319 + L1M4 LINE L1 4143 4913 -1233 2376 77 0 3 chr20 15163686 15163986 -51504019 - AluY SINE Alu -12 299 1 4813 206 68 32 chr20 15163986 15164482 -51503523 + L1M4 LINE L1 4913 5390 -756 399 197 0 0 chr20 15164482 15164553 -51503452 + AluJo SINE Alu 232 302 0 580 188 36 11 chr20 15164562 15164578 -51503427 + L1M4 LINE L1 5375 5389 -766 2060 129 0 7 chr20 15164578 15164881 -51503124 + AluSx SINE Alu 1 301 -11 580 188 36 11 chr20 15164881 15164998 -51503007 + L1M4 LINE L1 5389 5511 -644 2298 282 49 33 chr20 15164999 15165216 -51502789 + L1MEc LINE L1 819 1031 -5365 2219 117 0 0 chr20 15165216 15165523 -51502482 + AluSg SINE Alu 3 309 -1 2298 282 49 33 chr20 15165523 15166745 -51501260 + L1MEc LINE L1 1031 2255 -4141 2212 112 7 0 chr20 15166745 15167041 -51500964 + AluSq SINE Alu 1 298 -15 2298 282 49 33 chr20 15167041 15167093 -51500912 + L1MEc LINE L1 2255 2305 -4091 690 229 53 33 chr20 15167183 15167484 -51500521 - L1M4 LINE L1 -2840 3306 3000 778 230 82 19 chr20 15167506 15167776 -51500229 + L1MEc LINE L1 3781 4067 -2148 315 239 0 0 chr20 15167781 15167852 -51500153 + L1ME1 LINE L1 3842 3912 -2303 36749 80 7 8 chr20 15167868 15170720 -51497285 + L1PA6 LINE L1 11 2865 -3289 2296 71 14 7 chr20 15170720 15171016 -51496989 + AluSp SINE Alu 2 299 -14 36749 80 7 8 chr20 15171016 15174317 -51493688 + L1PA6 LINE L1 2865 6150 -4 553 174 12 72 chr20 15174305 15174472 -51493533 + L1ME1 LINE L1 3905 4061 -2154 * 2008 215 136 16 chr20 15174565 15175379 -51492626 + L1ME1 LINE L1 4352 5263 -952 5431 147 29 57 chr20 15175390 15175622 -51492383 + L1MC3 LINE L1 6588 6825 -960 1903 132 3 33 chr20 15175622 15175925 -51492080 + AluJb SINE Alu 1 294 -18 5431 147 29 57 chr20 15175925 15176494 -51491511 + L1MC3 LINE L1 6825 7409 -376 2484 67 0 10 chr20 15176494 15176807 -51491198 - AluY SINE Alu -1 310 1 5431 147 29 57 chr20 15176807 15177168 -51490837 + L1MC3 LINE L1 7409 7717 -68 2345 125 9 9 chr20 15177168 15177505 -51490500 - MER1B DNA MER1_type 0 337 1 5431 147 29 57 chr20 15177505 15177565 -51490440 + L1MC3 LINE L1 7717 7777 -8 2220 138 0 0 chr20 15177577 15177882 -51490123 + AluSx SINE Alu 1 305 -7 1721 188 0 13 chr20 15177884 15178187 -51489818 + AluJb SINE Alu 1 299 -13 281 188 145 16 chr20 15178200 15178386 -51489619 + L1ME1 LINE L1 5265 5480 -743 2207 161 8 62 chr20 15178392 15178798 -51489207 + MER31A LTR ERV1 11 386 -99 2439 184 12 5 chr20 15178798 15179221 -51488784 + MSTB LTR MaLR 1 426 0 2207 161 8 62 chr20 15179221 15179316 -51488689 + MER31A LTR ERV1 386 485 0 899 209 75 41 chr20 15179317 15179585 -51488420 + L1ME1 LINE L1 5471 5747 -488 264 59 0 0 chr20 15179612 15179646 -51488359 + (TA)n Simple_repeat Simple_repeat 2 35 0 1473 207 21 0 chr20 15179648 15179976 -51488029 + L1ME1 LINE L1 5896 6230 -5 1358 178 23 23 chr20 15180058 15180316 -51487689 + AluJo SINE Alu 35 292 -20 33 0 0 0 chr20 15180316 15180349 -51487656 + AT_rich Low_complexity Low_complexity 1 33 0 825 253 81 23 chr20 15180421 15180682 -51487323 + L2 LINE L2 2681 2956 -358 255 61 0 0 chr20 15180752 15180785 -51487220 + (TG)n Simple_repeat Simple_repeat 2 34 0 1077 243 48 54 chr20 15180875 15181154 -51486851 + L2 LINE L2 2944 3222 -91 2559 63 0 0 chr20 15181154 15181457 -51486548 + AluY SINE Alu 1 303 -8 1077 243 48 54 chr20 15181457 15181548 -51486457 + L2 LINE L2 3222 3312 -1 1415 143 4 39 chr20 15182387 15182618 -51485387 + AluSg/x SINE Alu 75 297 -15 190 129 0 0 chr20 15183026 15183057 -51484948 - L2 LINE L2 -2 3311 3281 1723 192 3 6 chr20 15183066 15183400 -51484605 - MER58B DNA MER1_type -8 333 1 474 261 27 53 chr20 15183402 15183590 -51484415 - L2 LINE L2 -54 3259 3077 3227 192 42 49 chr20 15183680 15184030 -51483975 + L1MB5 LINE L1 5254 5605 -569 2300 91 7 13 chr20 15184030 15184337 -51483668 + AluSq SINE Alu 1 305 -8 3227 192 42 49 chr20 15184337 15184912 -51483093 + L1MB5 LINE L1 5605 6173 -1 988 181 52 44 chr20 15184907 15185177 -51482828 + L1ME3A LINE L1 5880 6151 -19 * 341 165 144 0 chr20 15185227 15185324 -51482681 + L1MD1 LINE L1 6122 6232 -10 220 267 55 64 chr20 15185348 15185467 -51482538 - MER5B DNA MER1_type -57 132 7 565 269 31 16 chr20 15186366 15186559 -51481446 - Charlie8 DNA MER1_type -2181 236 41 333 0 0 0 chr20 15187120 15187157 -51480848 + (CA)n Simple_repeat Simple_repeat 2 38 0 180 295 124 23 chr20 15188629 15188758 -51479247 + L3 LINE CR1 1436 1577 0 25 0 0 0 chr20 15189168 15189193 -51478812 + AT_rich Low_complexity Low_complexity 1 25 0 2447 77 3 0 chr20 15190131 15190431 -51477574 - AluY SINE Alu -10 301 1 207 114 0 0 chr20 15190689 15190724 -51477281 + (CA)n Simple_repeat Simple_repeat 2 36 0 2108 123 0 10 chr20 15192756 15193058 -51474947 + AluSx SINE Alu 1 299 -13 22 35 0 0 chr20 15193086 15193115 -51474890 + AT_rich Low_complexity Low_complexity 1 29 0 2022 92 0 92 chr20 15193499 15193826 -51474179 - AluSx SINE Alu -15 297 1 360 64 0 0 chr20 15194894 15194941 -51473064 + (CA)n Simple_repeat Simple_repeat 2 48 0 2129 105 0 24 chr20 15195770 15196064 -51471941 + AluSx SINE Alu 1 287 -25 23 0 0 0 chr20 15196064 15196087 -51471918 + AT_rich Low_complexity Low_complexity 1 23 0 639 231 64 54 chr20 15196760 15196963 -51471042 - MIR SINE MIR 0 262 58 26 0 0 0 chr20 15199447 15199473 -51468532 + AT_rich Low_complexity Low_complexity 1 26 0 1943 152 0 7 chr20 15200771 15201074 -51466931 + AluSx SINE Alu 1 301 -11 754 228 130 16 chr20 15201544 15201851 -51466154 - MER113 DNA MER1_type? -174 347 6 2888 135 19 19 chr20 15202060 15202098 -51465907 + LTR24 LTR ERV1 1 38 -429 1987 96 68 0 chr20 15202098 15202378 -51465627 + AluSq SINE Alu 1 299 -14 2888 135 19 19 chr20 15202378 15202806 -51465199 + LTR24 LTR ERV1 37 467 0 329 339 55 0 chr20 15203004 15203113 -51464892 + MIR SINE MIR 2 116 -92 299 338 0 57 chr20 15203555 15203712 -51464293 + MIR3 SINE MIR 5 152 -56 2269 123 7 0 chr20 15203712 15204014 -51463991 + AluSq SINE Alu 1 304 -9 859 121 0 0 chr20 15204101 15204225 -51463780 - AluSg/x SINE Alu -13 299 176 21 0 0 0 chr20 15204920 15204941 -51463064 + AT_rich Low_complexity Low_complexity 1 21 0 2269 99 10 7 chr20 15205035 15205339 -51462666 + AluSx SINE Alu 1 305 -7 207 171 0 0 chr20 15205347 15205382 -51462623 + A-rich Low_complexity Low_complexity 4 38 0 315 236 111 65 chr20 15205562 15205761 -51462244 + MER5C DNA MER1_type 117 324 0 29 78 0 0 chr20 15205805 15205869 -51462136 + AT_rich Low_complexity Low_complexity 1 64 0 21 0 0 0 chr20 15206379 15206400 -51461605 + AT_rich Low_complexity Low_complexity 1 21 0 2026 94 47 0 chr20 15206413 15206690 -51461315 + AluSg SINE Alu 1 290 -20 2319 77 13 19 chr20 15206711 15207023 -51460982 + AluSg SINE Alu 1 310 0 322 269 159 15 chr20 15207458 15207722 -51460283 + L1MB7 LINE L1 5297 5598 -2210 33 0 0 0 chr20 15208043 15208076 -51459929 + AT_rich Low_complexity Low_complexity 1 33 0 2567 152 46 33 chr20 15208618 15209076 -51458929 + L1MB7 LINE L1 5586 6037 -147 2283 100 7 0 chr20 15209076 15209375 -51458630 + AluSq SINE Alu 1 301 -12 2365 83 3 0 chr20 15209377 15209679 -51458326 + AluSp SINE Alu 3 305 -8 2567 152 46 33 chr20 15209679 15209764 -51458241 + L1MB7 LINE L1 6037 6139 -45 2244 125 0 0 chr20 15210012 15210316 -51457689 - AluSx SINE Alu -8 304 1 2324 94 0 44 chr20 15210769 15211088 -51456917 - AluSx SINE Alu -7 305 1 332 239 72 36 chr20 15211156 15211323 -51456682 + L1ME LINE L1 5598 5770 -351 * 4528 155 109 20 chr20 15211302 15212538 -51455467 + L1MB7 LINE L1 4800 6171 -13 233 290 33 66 chr20 15212925 15213108 -51454897 + L2 LINE L2 1976 2152 -1162 1301 196 37 21 chr20 15214067 15214306 -51453699 + Charlie1 DNA MER1_type 2378 2627 -134 2246 103 3 3 chr20 15214306 15214618 -51453387 - AluSx SINE Alu 0 312 1 1301 196 37 21 chr20 15214618 15214756 -51453249 + Charlie1 DNA MER1_type 2627 2761 0 325 264 0 0 chr20 15215071 15215162 -51452843 + MLT1-int LTR MaLR 285 375 -996 614 220 57 0 chr20 15215162 15215303 -51452702 + MLT1G LTR MaLR 441 589 -1 2178 126 0 0 chr20 15215525 15215827 -51452178 - AluSx SINE Alu -10 302 1 1040 182 250 5 chr20 15216208 15216693 -51451312 - MLT1E1 LTR MaLR -5 649 2 359 254 67 30 chr20 15216753 15216918 -51451087 + MLT1K LTR MaLR 2 172 -416 225 310 75 32 chr20 15217472 15217659 -51450346 + L2 LINE L2 3024 3218 -95 1026 186 0 0 chr20 15217664 15217841 -51450164 - FRAM SINE Alu -1 175 1 421 228 209 13 chr20 15217866 15218170 -51449835 - L1ME3A LINE L1 -5 6165 5755 6534 188 11 32 chr20 15218171 15220039 -51447966 - L1PA15 LINE L1 -3 6162 4322 2107 102 20 10 chr20 15220039 15220332 -51447673 + AluSq SINE Alu 13 308 -5 6534 188 11 32 chr20 15220332 15220648 -51447357 - L1PA15 LINE L1 -1843 4322 4001 2207 82 14 0 chr20 15220648 15220960 -51447045 - AluSx SINE Alu 0 316 1 233 226 20 69 chr20 15221047 15221149 -51446856 - LTR67 LTR ERVL -4 553 457 2021 102 6 75 chr20 15221555 15221887 -51446118 + AluSg SINE Alu 1 309 -1 780 164 0 8 chr20 15222163 15222291 -51445714 - FLAM_C SINE Alu -6 127 1 2253 104 10 0 chr20 15222325 15222614 -51445391 - AluSx SINE Alu -20 292 1 2338 99 0 0 chr20 15222658 15222961 -51445044 + AluSq SINE Alu 1 303 -10 251 139 23 0 chr20 15222961 15223004 -51445001 - Tigger1 DNA MER2_type -345 2073 2030 286 308 30 23 chr20 15223394 15223527 -51444478 + LTR16C LTR ERVL 358 491 0 1774 132 0 0 chr20 15223697 15223947 -51444058 - AluSx SINE Alu -24 288 39 237 132 0 0 chr20 15224005 15224043 -51443962 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 2029 128 28 0 chr20 15224673 15224961 -51443044 - AluSx SINE Alu -16 296 1 498 265 134 67 chr20 15225421 15225734 -51442271 + MLT1K LTR MaLR 133 466 -122 201 154 0 0 chr20 15225750 15225789 -51442216 + CT-rich Low_complexity Low_complexity 2 40 0 526 169 0 0 chr20 15225799 15225882 -51442123 - AluJ/FLAM SINE Alu -225 87 5 334 115 0 0 chr20 15225905 15225957 -51442048 + MLT1K LTR MaLR 537 588 0 325 309 29 15 chr20 15225957 15226093 -51441912 - MIR3 SINE MIR -51 157 20 2173 108 3 0 chr20 15226167 15226453 -51441552 + AluSx SINE Alu 1 287 -25 4937 134 9 36 chr20 15226534 15226906 -51441099 - LTR39 LTR ERV1 0 783 402 2138 94 45 0 chr20 15226906 15227194 -51440811 + AluSp SINE Alu 1 301 -12 4937 134 9 36 chr20 15227194 15227402 -51440603 - LTR39 LTR ERV1 -381 402 229 1539 87 0 5 chr20 15227402 15227598 -51440407 + AluSx SINE Alu 1 195 -117 4937 134 9 36 chr20 15227598 15227819 -51440186 - LTR39 LTR ERV1 -554 229 3 953 304 33 18 chr20 15228835 15229231 -51438774 + LTR16A1 LTR ERVL 73 456 -1 2225 112 20 0 chr20 15229822 15230117 -51437888 - AluSx SINE Alu -11 301 1 207 0 0 0 chr20 15230254 15230277 -51437728 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2016 177 52 74 chr20 15230332 15230779 -51437226 + MLT1D LTR MaLR 1 437 -68 2244 124 3 0 chr20 15230779 15231085 -51436920 - AluSx SINE Alu -5 307 1 2016 177 52 74 chr20 15231085 15231151 -51436854 + MLT1D LTR MaLR 437 503 -2 2846 260 120 38 chr20 15231705 15231975 -51436030 - L2 LINE L2 -7 3306 3059 2189 117 3 0 chr20 15231975 15232273 -51435732 + AluSx SINE Alu 1 299 -13 2846 260 120 38 chr20 15232273 15232511 -51435494 - L2 LINE L2 -254 3059 2842 2176 125 3 3 chr20 15232511 15232822 -51435183 + AluSx SINE Alu 1 311 -1 2846 260 120 38 chr20 15232822 15232880 -51435125 - L2 LINE L2 -471 2842 2790 1933 142 0 39 chr20 15232880 15233190 -51434815 + AluSx SINE Alu 1 298 -14 2846 260 120 38 chr20 15233190 15233791 -51434214 - L2 LINE L2 -523 2790 2239 2133 139 0 0 chr20 15233791 15234092 -51433913 + AluSx SINE Alu 1 301 -11 2846 260 120 38 chr20 15234092 15234535 -51433470 - L2 LINE L2 -1074 2239 1567 827 206 5 57 chr20 15234542 15234667 -51433338 - MER5A DNA MER1_type 0 189 76 2152 121 44 0 chr20 15234667 15234965 -51433040 - AluSx SINE Alu -1 311 1 827 206 5 57 chr20 15234965 15235033 -51432972 - MER5A DNA MER1_type -113 76 6 2002 101 18 7 chr20 15235079 15235383 -51432622 - AluSc SINE Alu 0 307 1 1944 137 0 65 chr20 15235409 15235731 -51432274 + AluSx SINE Alu 1 301 -11 2247 106 0 0 chr20 15236414 15236730 -51431275 + AluSq SINE Alu 1 316 0 211 250 0 0 chr20 15236744 15236800 -51431205 - MIR SINE MIR -110 152 97 3980 151 77 59 chr20 15237126 15237295 -51430710 - L1MC2 LINE L1 -11 6333 6168 2171 102 0 3 chr20 15237295 15237606 -51430399 - AluSx SINE Alu 0 310 1 3980 151 77 59 chr20 15237606 15237972 -51430033 - L1MC2 LINE L1 -176 6168 5810 1685 146 4 0 chr20 15237972 15238226 -51429779 - AluSx SINE Alu -57 255 1 3980 151 77 59 chr20 15238226 15238564 -51429441 - L1MC2 LINE L1 -534 5810 5443 2016 134 0 3 chr20 15238564 15238876 -51429129 - AluSx SINE Alu 0 313 3 979 170 12 0 chr20 15238882 15239081 -51428924 - AluJb SINE Alu 0 321 121 1082 193 0 10 chr20 15239379 15239576 -51428429 - AluJo SINE Alu -115 197 3 356 0 23 0 chr20 15239585 15239629 -51428376 + (TC)n Simple_repeat Simple_repeat 2 46 0 2461 97 0 0 chr20 15239773 15240082 -51427923 - AluSq SINE Alu -4 309 1 353 259 102 0 chr20 15240230 15240338 -51427667 - LTR67 LTR ERVL 0 557 439 246 336 62 31 chr20 15240422 15240550 -51427455 - LTR67 LTR ERVL -284 273 142 2770 233 9 68 chr20 15241033 15241214 -51426791 - L1MCa LINE L1 -3015 3411 3221 2252 87 38 0 chr20 15241214 15241501 -51426504 + AluSq SINE Alu 1 298 -15 2770 233 9 68 chr20 15241501 15241619 -51426386 - L1MCa LINE L1 -3205 3221 3098 2422 104 0 0 chr20 15241619 15241928 -51426077 - AluSx SINE Alu 0 312 4 2770 233 9 68 chr20 15241928 15242482 -51425523 - L1MCa LINE L1 -3328 3098 2513 2036 109 35 3 chr20 15242482 15242765 -51425240 - AluSc SINE Alu -17 292 1 2770 233 9 68 chr20 15242765 15242876 -51425129 - L1MCa LINE L1 -3913 2513 2502 1968 148 83 3 chr20 15242876 15243215 -51424790 - MER47A DNA MER2_type 0 366 1 2770 233 9 68 chr20 15243215 15243240 -51424765 - L1MCa LINE L1 -3924 2502 2477 2228 113 0 10 chr20 15243248 15243557 -51424448 - AluSx SINE Alu -6 306 1 8249 158 35 53 chr20 15243557 15244134 -51423871 - L1MCa LINE L1 -4250 2177 1591 261 0 0 0 chr20 15244134 15244163 -51423842 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 8249 158 35 53 chr20 15244163 15244331 -51423674 - L1MCa LINE L1 -4836 1591 1421 2103 110 0 11 chr20 15244331 15244612 -51423393 - AluSq SINE Alu -35 278 1 8249 158 35 53 chr20 15244612 15245640 -51422365 - L1MCa LINE L1 -5006 1421 7 271 205 39 0 chr20 15245916 15245994 -51422011 + CT-rich Low_complexity Low_complexity 3 83 0 1208 241 21 45 chr20 15247200 15247581 -51420424 - L1MC4a LINE L1 -2 7806 7435 467 293 118 24 chr20 15247858 15248070 -51419935 - MLT1K LTR MaLR -42 546 315 2222 115 70 50 chr20 15248230 15248379 -51419626 + THE1B LTR MaLR 1 146 -218 2557 69 0 0 chr20 15248379 15248684 -51419321 - AluY SINE Alu -6 305 1 2222 115 70 50 chr20 15248684 15248891 -51419114 + THE1B LTR MaLR 146 364 0 2198 111 3 10 chr20 15249511 15249817 -51418188 + AluSq SINE Alu 10 313 0 1156 89 11 11 chr20 15249826 15249853 -51418152 + (GAAA)n Simple_repeat Simple_repeat 1 207 0 1156 89 11 11 chr20 15249853 15250033 -51417972 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 280 249 111 142 chr20 15250113 15250283 -51417722 + LTR16C LTR ERVL 246 420 -71 2170 121 0 3 chr20 15250283 15250580 -51417425 + AluSx SINE Alu 3 298 -14 1857 171 10 0 chr20 15250585 15250883 -51417122 + AluJb SINE Alu 1 301 -11 280 249 111 142 chr20 15250883 15250899 -51417106 + LTR16C LTR ERVL 424 439 -52 1578 150 26 19 chr20 15250899 15251166 -51416839 + AluJb SINE Alu 23 291 -21 280 249 111 142 chr20 15251166 15251225 -51416780 + LTR16C LTR ERVL 439 490 -1 524 229 111 75 chr20 15251450 15251685 -51416320 + MLT1F LTR MaLR 1 226 -323 2324 107 10 0 chr20 15251685 15251995 -51416010 + AluSp SINE Alu 1 313 0 524 229 111 75 chr20 15251995 15252239 -51415766 + MLT1F LTR MaLR 226 549 0 448 267 184 31 chr20 15252500 15252755 -51415250 + MLT1K LTR MaLR 15 308 -280 868 272 102 15 chr20 15252834 15253176 -51414829 + L2 LINE L2 2253 2624 -690 288 286 36 0 chr20 15253315 15253399 -51414606 + L2 LINE L2 3227 3313 0 578 258 32 32 chr20 15253405 15253595 -51414410 + MLT1K LTR MaLR 391 580 -8 383 268 64 38 chr20 15254056 15254213 -51413792 - MIR3 SINE MIR -28 180 20 2473 50 0 13 chr20 15254576 15254874 -51413131 + AluY SINE Alu 1 294 -17 961 265 94 13 chr20 15255275 15255573 -51412432 + LTR16A LTR ERVL 123 444 -6 2606 78 0 0 chr20 15255604 15255913 -51412092 - AluSc SINE Alu 0 309 1 41 48 0 0 chr20 15256502 15256564 -51411441 + AT_rich Low_complexity Low_complexity 1 62 0 1534 167 40 11 chr20 15256594 15256869 -51411136 - AluJo SINE Alu -13 299 17 2135 111 7 0 chr20 15256887 15257187 -51410818 - AluSx SINE Alu 0 302 1 255 186 41 99 chr20 15257353 15257403 -51410602 + MSTD LTR MaLR 1 30 -366 2425 109 0 0 chr20 15257403 15257716 -51410289 + AluSq SINE Alu 1 313 0 255 186 41 99 chr20 15257716 15257764 -51410241 + MSTD LTR MaLR 30 79 -317 903 112 8 0 chr20 15257764 15257889 -51410116 - AluSg/x SINE Alu -14 296 171 1545 199 39 19 chr20 15257899 15258206 -51409799 + MSTD LTR MaLR 84 396 0 346 238 25 0 chr20 15258206 15258278 -51409727 + MLT1K LTR MaLR 479 552 -36 1034 277 64 17 chr20 15258526 15258822 -51409183 + LTR16C LTR ERVL 178 487 -4 1282 170 142 42 chr20 15259763 15260093 -51407912 - MLT1A1 LTR MaLR -2 363 1 182 224 0 13 chr20 15260190 15260266 -51407739 + (TA)n Simple_repeat Simple_repeat 1 75 0 685 199 10 2 chr20 15260271 15260683 -51407322 + GA-rich Low_complexity Low_complexity 1 414 0 569 196 0 26 chr20 15260683 15260830 -51407175 + L1MC4 LINE L1 7832 8042 0 1968 121 55 21 chr20 15260910 15261199 -51406806 + AluSx SINE Alu 1 299 -13 2412 131 54 47 chr20 15261226 15261576 -51406429 - L1MB5 LINE L1 -12 6162 5816 2377 87 7 0 chr20 15261576 15261874 -51406131 - AluSx SINE Alu -12 300 1 2446 103 0 0 chr20 15261874 15262184 -51405821 - AluSx SINE Alu -2 310 1 2412 131 54 47 chr20 15262184 15262297 -51405708 - L1MB5 LINE L1 -357 5817 5695 394 183 151 11 chr20 15262380 15262473 -51405532 + MLT1K LTR MaLR 483 588 0 307 223 10 10 chr20 15263478 15263581 -51404424 + GA-rich Low_complexity Low_complexity 2 104 0 2214 139 6 6 chr20 15263604 15263941 -51404064 + MER1B DNA MER1_type 1 337 0 499 278 0 80 chr20 15264134 15264310 -51403695 - MLT1K LTR MaLR -327 261 100 230 250 28 14 chr20 15264421 15264493 -51403512 + MLT1K LTR MaLR 515 587 -1 278 333 0 10 chr20 15265320 15265422 -51402583 + MIR SINE MIR 53 153 -109 482 227 21 43 chr20 15266182 15266323 -51401682 + L1ME LINE L1 5600 5737 -433 371 159 0 4 chr20 15266567 15266638 -51401367 + Alu SINE Alu 1 53 -247 2160 90 7 0 chr20 15266644 15266959 -51401046 + AluSg SINE Alu 3 319 0 216 0 0 0 chr20 15266993 15267017 -51400988 + (CA)n Simple_repeat Simple_repeat 2 25 0 317 80 21 0 chr20 15267017 15267059 -51400946 + MLT2B1 LTR ERVL 365 520 0 1624 193 43 15 chr20 15267099 15267426 -51400579 + MSTB LTR MaLR 1 336 -90 610 92 11 0 chr20 15267597 15267684 -51400321 + MSTB LTR MaLR 345 432 0 465 221 77 0 chr20 15267685 15267789 -51400216 + MER115 DNA AcHobo 553 664 -29 910 234 20 5 chr20 15267792 15267993 -51400012 - MER63A DNA MER1_type 0 210 7 2202 116 3 3 chr20 15268492 15268795 -51399210 - AluSq SINE Alu -10 303 1 652 297 11 11 chr20 15270412 15270597 -51397408 - MIR SINE MIR -71 191 7 648 258 145 33 chr20 15270987 15271352 -51396653 - MLT1I LTR MaLR 0 409 4 30 45 0 0 chr20 15272349 15272393 -51395612 + AT_rich Low_complexity Low_complexity 1 44 0 1646 151 21 42 chr20 15272472 15272756 -51395249 - AluJo SINE Alu -1 311 34 597 296 66 12 chr20 15272763 15273020 -51394985 - L1MC4 LINE L1 -130 7912 7642 1817 162 24 0 chr20 15273737 15274033 -51393972 - AluJo SINE Alu -9 303 1 244 95 24 0 chr20 15274325 15274367 -51393638 + MLT1K LTR MaLR 524 566 -22 2178 104 0 13 chr20 15274444 15274751 -51393254 - AluSx SINE Alu -9 303 1 22 56 0 0 chr20 15274974 15275010 -51392995 + AT_rich Low_complexity Low_complexity 1 36 0 476 16 0 16 chr20 15275150 15275212 -51392793 - MSTB2 LTR MaLR -382 75 15 664 291 115 62 chr20 15275843 15276311 -51391694 - MLT1J LTR MaLR -1 510 18 588 237 348 27 chr20 15276615 15276751 -51391254 + MLT1G1 LTR MaLR 72 163 -432 2255 108 0 3 chr20 15276751 15277046 -51390959 + AluSq SINE Alu 1 294 -19 588 237 348 27 chr20 15277046 15277280 -51390725 + MLT1G1 LTR MaLR 163 561 -34 761 206 23 139 chr20 15277451 15277796 -51390209 - LTR41 LTR ERVL -6 767 463 499 228 16 11 chr20 15277829 15278018 -51389987 + L1ME LINE L1 3164 3353 -2793 413 118 0 26 chr20 15278026 15278102 -51389903 + SVA Other Other 451 524 -862 3875 231 49 63 chr20 15278215 15278391 -51389614 + L1ME LINE L1 3364 3541 -2605 2233 121 3 0 chr20 15278391 15278688 -51389317 + AluSx SINE Alu 1 298 -14 3875 231 49 63 chr20 15278688 15279244 -51388761 + L1ME LINE L1 3541 4103 -2043 257 83 0 0 chr20 15279244 15279280 -51388725 + U2 snRNA snRNA 1 36 -152 3875 231 49 63 chr20 15279280 15280009 -51387996 + L1ME LINE L1 4103 4840 -1306 659 170 191 0 chr20 15280021 15280168 -51387837 - FRAM SINE Alu -7 169 1 11056 52 4 9 chr20 15280185 15282397 -51385608 + L1PA6 LINE L1 3961 6154 0 701 216 0 0 chr20 15282402 15282518 -51385487 - FLAM_C SINE Alu -16 117 2 3642 197 21 15 chr20 15282522 15283328 -51384677 - L1MD2 LINE L1 -2 6357 5547 1325 226 33 33 chr20 15283328 15283431 -51384574 - L1MD2 LINE L1 -1799 4347 4245 2267 92 27 3 chr20 15283431 15283724 -51384281 - AluSq SINE Alu -12 301 2 1325 226 33 33 chr20 15283724 15284009 -51383996 - L1MD2 LINE L1 -1900 4246 3959 1519 119 5 0 chr20 15284013 15284235 -51383770 - AluSx SINE Alu 0 303 81 824 104 0 0 chr20 15284241 15284347 -51383658 - AluSx SINE Alu -207 106 1 1235 215 45 77 chr20 15284350 15284909 -51383096 - L1MD2 LINE L1 -2187 3959 3419 * 1842 197 87 47 chr20 15284908 15285773 -51382232 + L1ME LINE L1 4845 5737 -429 265 232 142 65 chr20 15285928 15286083 -51381922 + MLT1H LTR MaLR 126 292 -257 356 240 53 45 chr20 15286100 15286254 -51381751 + MLT1H LTR MaLR 430 547 -2 669 244 23 35 chr20 15286345 15286410 -51381595 - MER5B DNA MER1_type -1 177 113 2096 99 13 30 chr20 15286410 15286712 -51381293 + AluSx SINE Alu 1 297 -15 669 244 23 35 chr20 15286712 15286818 -51381187 - MER5B DNA MER1_type -65 113 8 1442 174 9 114 chr20 15287827 15288047 -51379958 - AluJo SINE Alu -13 299 124 1876 140 11 11 chr20 15288047 15288333 -51379672 - AluSx SINE Alu -26 286 1 1442 174 9 114 chr20 15288333 15288446 -51379559 - AluJo SINE Alu -188 124 1 23 33 0 0 chr20 15289052 15289082 -51378923 + AT_rich Low_complexity Low_complexity 1 30 0 23 54 0 0 chr20 15289102 15289139 -51378866 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr20 15289248 15289270 -51378735 + AT_rich Low_complexity Low_complexity 1 22 0 32 26 0 0 chr20 15289806 15289845 -51378160 + AT_rich Low_complexity Low_complexity 1 39 0 2118 122 0 28 chr20 15291257 15291434 -51376571 - AluJb SINE Alu 0 312 146 2565 74 0 0 chr20 15291434 15291745 -51376260 - AluY SINE Alu 0 311 1 2118 122 0 28 chr20 15291745 15291888 -51376117 - AluJb SINE Alu -166 146 1 309 289 74 59 chr20 15293619 15293875 -51374130 + L1M4 LINE L1 4344 4603 -1543 * 315 161 42 169 chr20 15293851 15293969 -51374036 + L1M4 LINE L1 3852 3954 -2192 328 333 16 40 chr20 15294151 15294400 -51373605 + L1M4 LINE L1 4881 5123 -1023 279 269 47 0 chr20 15295011 15295149 -51372856 + L1MC5 LINE L1 7272 7413 -395 2255 108 0 7 chr20 15295467 15295772 -51372233 + AluSx SINE Alu 1 303 -9 377 382 100 13 chr20 15295897 15296198 -51371807 - L2 LINE L2 -1 3271 2945 1661 154 39 51 chr20 15297196 15297507 -51370498 + AluJo SINE Alu 1 307 -5 2322 105 0 3 chr20 15298640 15298953 -51369052 + AluSx SINE Alu 1 312 0 1384 315 167 14 chr20 15299912 15301388 -51366617 + L2 LINE L2 1606 3312 -1 324 0 0 0 chr20 15301461 15301497 -51366508 + (CAAAA)n Simple_repeat Simple_repeat 1 36 0 2253 109 0 13 chr20 15303213 15303525 -51364480 + AluSg SINE Alu 1 308 -2 253 268 85 98 chr20 15303576 15303605 -51364400 - L2 LINE L2 0 3313 3285 2163 119 7 0 chr20 15303605 15303908 -51364097 + AluSx SINE Alu 1 305 -7 253 268 85 98 chr20 15303908 15304173 -51363832 - L2 LINE L2 -28 3285 3023 315 255 191 21 chr20 15304283 15304424 -51363581 - L1MC5 LINE L1 -35 7926 7762 2244 98 0 7 chr20 15304707 15305002 -51363003 - AluSq SINE Alu -20 293 1 2411 77 0 3 chr20 15305014 15305312 -51362693 - AluY SINE Alu -14 297 1 2264 48 0 4 chr20 15305912 15306183 -51361822 + AluY SINE Alu 35 304 -7 458 187 35 4 chr20 15306273 15306457 -51361548 + MER21A LTR ERV1 2 264 -667 2907 136 70 21 chr20 15306462 15306992 -51361013 + MER21A LTR ERV1 376 931 0 332 289 139 50 chr20 15307154 15307334 -51360671 + MIR3 SINE MIR 4 199 -9 2071 125 4 0 chr20 15307532 15307854 -51360151 - AluSx SINE Alu 0 323 1 332 332 96 11 chr20 15308151 15308338 -51359667 + MIR SINE MIR 60 262 0 200 98 73 0 chr20 15308680 15308721 -51359284 + (CAAAC)n Simple_repeat Simple_repeat 3 46 0 250 229 0 0 chr20 15309670 15309718 -51358287 + MIR3 SINE MIR 112 159 -49 1083 203 63 5 chr20 15310766 15310973 -51357032 - MER20 DNA MER1_type 0 219 1 221 318 0 32 chr20 15311148 15311211 -51356794 + L2 LINE L2 3243 3303 -10 22 0 0 0 chr20 15311968 15311990 -51356015 + AT_rich Low_complexity Low_complexity 1 22 0 2247 96 3 10 chr20 15312291 15312584 -51355421 - AluSx SINE Alu -21 291 1 2040 141 3 7 chr20 15312946 15313243 -51354762 - AluJb SINE Alu -16 296 1 414 270 25 88 chr20 15313271 15313475 -51354530 + L2 LINE L2 3118 3308 -5 448 289 107 33 chr20 15314663 15314905 -51353100 + L1ME3A LINE L1 457 716 -5403 593 245 68 32 chr20 15315030 15315279 -51352726 + L1ME3A LINE L1 967 1224 -4895 1012 268 81 65 chr20 15315590 15316023 -51351982 + L2 LINE L2 27 466 -2848 343 288 120 24 chr20 15316057 15316656 -51351349 + L1ME3A LINE L1 4750 5412 -770 991 135 0 0 chr20 15316713 15316846 -51351159 + AluSq/x SINE Alu 1 133 -179 1725 112 124 11 chr20 15316849 15317116 -51350889 + AluSg SINE Alu 1 297 -13 434 286 175 16 chr20 15317116 15317375 -51350630 + L1ME3A LINE L1 5581 5880 -273 1107 142 182 0 chr20 15317434 15317681 -51350324 - L1MB8 LINE L1 -75 6103 5812 3855 139 57 6 chr20 15317724 15318538 -51349467 + L1MA9 LINE L1 5339 6290 -22 383 230 72 7 chr20 15318855 15318994 -51349011 + L1ME3A LINE L1 5162 5309 -837 1266 240 74 45 chr20 15319061 15319657 -51348348 + L2 LINE L2 2685 3290 -23 470 290 98 4 chr20 15319657 15320076 -51347929 + L1ME3A LINE L1 5410 5873 -297 2133 139 0 0 chr20 15320079 15320380 -51347625 - AluSx SINE Alu -11 301 1 2015 153 0 7 chr20 15320592 15320893 -51347112 - AluSx SINE Alu -13 299 1 2010 97 0 103 chr20 15321907 15322246 -51345759 + AluSc SINE Alu 1 304 -5 584 171 47 39 chr20 15322300 15322429 -51345576 - Tigger3(Golem) DNA MER2_type -2 3027 2898 1457 124 19 112 chr20 15322441 15322763 -51345242 - MER7A DNA MER2_type -56 290 1 354 310 203 6 chr20 15322844 15323002 -51345003 + MIR SINE MIR 62 250 -12 1011 161 0 0 chr20 15323041 15323221 -51344784 + (TA)n Simple_repeat Simple_repeat 1 180 0 2188 75 10 10 chr20 15323221 15323515 -51344490 - AluY SINE Alu -17 294 1 1567 114 107 75 chr20 15323703 15323983 -51344022 - AluSg SINE Alu -21 289 1 2273 98 0 10 chr20 15324190 15324495 -51343510 - AluSx SINE Alu -10 302 1 2229 117 0 0 chr20 15324851 15325160 -51342845 + AluSx SINE Alu 1 309 -3 1430 201 44 17 chr20 15325325 15325618 -51342387 + AluJo SINE Alu 1 301 -11 2014 101 40 3 chr20 15326350 15326646 -51341359 + AluSc SINE Alu 1 307 -2 274 293 49 12 chr20 15326905 15326987 -51341018 + MIR SINE MIR 46 130 -132 1406 279 153 65 chr20 15327622 15328438 -51339567 + L2 LINE L2 2 897 -2417 781 44 195 0 chr20 15328438 15328551 -51339454 + MER85 DNA T2_type 1 135 -4 1406 279 153 65 chr20 15328551 15328585 -51339420 + L2 LINE L2 897 927 -2387 1675 272 331 11 chr20 15328707 15329611 -51338394 + L2 LINE L2 1782 2974 -340 481 276 83 0 chr20 15329668 15329813 -51338192 + L2 LINE L2 3156 3312 -1 25 102 0 0 chr20 15330240 15330328 -51337677 + AT_rich Low_complexity Low_complexity 1 88 0 243 269 0 15 chr20 15330777 15330844 -51337161 - MIR SINE MIR -91 171 106 613 286 33 9 chr20 15330975 15331238 -51336767 + L1ME LINE L1 5423 5680 -441 487 267 68 6 chr20 15331768 15331944 -51336061 + L1M4 LINE L1 3631 3817 -2329 1793 147 0 21 chr20 15332025 15332330 -51335675 - AluJb SINE Alu 0 301 3 705 329 37 40 chr20 15332647 15332969 -51335036 - L3 LINE CR1 -86 1491 1171 1511 140 137 33 chr20 15333469 15333776 -51334229 - MER44D DNA MER2_type 0 609 1 7269 73 8 18 chr20 15334802 15336025 -51331980 + SVA Other Other 432 1385 -1 25 31 0 0 chr20 15336025 15336057 -51331948 + AT_rich Low_complexity Low_complexity 1 32 0 24 32 0 0 chr20 15336712 15336743 -51331262 + AT_rich Low_complexity Low_complexity 1 31 0 2554 59 0 3 chr20 15337483 15337789 -51330216 - AluY SINE Alu -6 305 1 255 266 242 8 chr20 15337850 15337978 -51330027 - MIR SINE MIR -88 174 17 2082 181 35 24 chr20 15339082 15339507 -51328498 - Tigger2a DNA MER2_type 0 434 5 2068 136 0 0 chr20 15339569 15339863 -51328142 + AluSx SINE Alu 1 294 -18 639 273 87 9 chr20 15340581 15341011 -51326994 + L1MEc LINE L1 896 1209 -4910 21 0 0 0 chr20 15341256 15341277 -51326728 + AT_rich Low_complexity Low_complexity 1 21 0 1941 100 43 50 chr20 15341873 15342174 -51325831 + AluSq SINE Alu 1 299 -14 1885 121 4 0 chr20 15342969 15343234 -51324771 + AluSx SINE Alu 41 306 -6 2333 99 0 3 chr20 15343243 15343556 -51324449 + AluSx SINE Alu 1 312 0 2002 141 10 10 chr20 15344132 15344436 -51323569 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr20 15344662 15344683 -51323322 + AT_rich Low_complexity Low_complexity 1 21 0 1493 162 101 25 chr20 15344997 15345275 -51322730 - AluJo SINE Alu -13 299 1 381 169 0 0 chr20 15345431 15345496 -51322509 + MER3 DNA MER1_type 1 65 -144 247 216 0 0 chr20 15345534 15345585 -51322420 + MER3 DNA MER1_type 155 205 -4 * 252 240 0 0 chr20 15345546 15345596 -51322409 - MER3 DNA MER1_type -119 90 41 186 43 0 0 chr20 15346537 15346560 -51321445 + (T)n Simple_repeat Simple_repeat 1 23 0 300 172 0 16 chr20 15348324 15348388 -51319617 - U2 snRNA snRNA -124 64 2 2625 31 0 0 chr20 15348441 15348735 -51319270 + AluY SINE Alu 1 294 -17 946 122 176 29 chr20 15348880 15349085 -51318920 + MER46A DNA MER2_type 1 235 -1 413 291 89 57 chr20 15349085 15349324 -51318681 - MIR SINE MIR -5 257 8 344 328 107 16 chr20 15349348 15349699 -51318306 - L1 LINE L1 -1646 4500 4106 216 219 0 0 chr20 15350653 15350735 -51317270 + (CAT)n Simple_repeat Simple_repeat 2 83 0 266 398 46 54 chr20 15351160 15351509 -51316496 - L2 LINE L2 -14 3258 2913 680 333 91 37 chr20 15351681 15352197 -51315808 - L2 LINE L2 -590 2724 2181 245 298 0 0 chr20 15352541 15352598 -51315407 - L2 LINE L2 -2 3270 3214 22 35 0 0 chr20 15353090 15353119 -51314886 + AT_rich Low_complexity Low_complexity 1 29 0 233 222 19 0 chr20 15353229 15353283 -51314722 + MER113 DNA MER1_type? 459 513 -8 1886 153 10 7 chr20 15353392 15353692 -51314313 + AluJb SINE Alu 1 301 -11 2206 133 0 0 chr20 15354162 15354462 -51313543 - AluSx SINE Alu -12 300 1 238 217 145 0 chr20 15354502 15354571 -51313434 - L1ME LINE L1 -440 5681 5603 234 220 237 0 chr20 15354783 15354842 -51313163 + MIR SINE MIR 36 108 -100 874 149 129 37 chr20 15355807 15356079 -51311926 + MER33 DNA MER1_type 1 290 -34 484 327 74 0 chr20 15356107 15356269 -51311736 + MER91A DNA MER1_type 3 176 -20 423 290 70 0 chr20 15356268 15356368 -51311637 + MER91A DNA MER1_type 90 196 0 * 2256 109 0 3 chr20 15356503 15356805 -51311200 - AluSx SINE Alu -11 301 1 1613 140 63 7 chr20 15358177 15358463 -51309542 + AluJb SINE Alu 1 302 -10 210 297 0 16 chr20 15359012 15359076 -51308929 - MIR SINE MIR -47 215 153 32 0 0 0 chr20 15359922 15359954 -51308051 + GC_rich Low_complexity Low_complexity 1 32 0 409 192 222 48 chr20 15360163 15360262 -51307743 - L2 LINE L2 -427 2887 2807 1321 122 52 67 chr20 15360262 15360591 -51307414 + MER33 DNA MER1_type 1 324 0 409 192 222 48 chr20 15360591 15360658 -51307347 - L2 LINE L2 -507 2807 2692 183 80 0 0 chr20 15361693 15361718 -51306287 + (TG)n Simple_repeat Simple_repeat 2 26 0 271 367 18 0 chr20 15362593 15362702 -51305303 + MIR SINE MIR 1 111 -151 197 286 104 13 chr20 15362674 15362751 -51305254 + L2 LINE L2 3174 3257 -15 * 2179 118 0 0 chr20 15363795 15364092 -51303913 - AluSx SINE Alu -15 297 1 2433 77 0 3 chr20 15364103 15364403 -51303602 - AluY SINE Alu -12 299 1 232 330 86 34 chr20 15364724 15364933 -51303072 - L2 LINE L2 -606 2708 2489 1355 269 137 27 chr20 15364941 15365606 -51302399 + L2 LINE L2 2416 3184 -129 507 214 151 38 chr20 15365864 15366023 -51301982 + MIR SINE MIR 16 192 -70 736 222 7 0 chr20 15366509 15366653 -51301352 - MER63A DNA MER1_type -9 201 57 383 182 159 0 chr20 15366811 15366899 -51301106 - MER63A DNA MER1_type 0 210 109 229 241 0 60 chr20 15367973 15368056 -51299949 - L1ME4a LINE L1 -52 6069 5992 365 289 64 45 chr20 15368198 15368464 -51299541 - L1ME4a LINE L1 -297 5824 5554 401 266 147 45 chr20 15368544 15368904 -51299101 - L1ME4a LINE L1 -764 5382 4988 2308 93 10 0 chr20 15368904 15369206 -51298799 - AluSx SINE Alu -7 305 1 401 266 147 45 chr20 15369206 15369288 -51298717 - L1ME4a LINE L1 -1158 4988 4916 1102 121 0 13 chr20 15369638 15369795 -51298210 + AluSx SINE Alu 1 155 -157 1914 161 0 0 chr20 15370164 15370450 -51297555 + AluJb SINE Alu 1 286 -26 361 194 28 0 chr20 15370766 15370838 -51297167 - MER81 DNA DNA 0 114 41 2128 123 7 0 chr20 15371326 15371618 -51296387 + AluSx SINE Alu 3 296 -16 5482 122 54 18 chr20 15371674 15372551 -51295454 + L1MC1 LINE L1 5426 6333 0 206 314 166 31 chr20 15373673 15373902 -51294103 - L2 LINE L2 -339 2975 2716 2357 105 0 0 chr20 15374044 15374348 -51293657 + AluSx SINE Alu 1 304 -8 1817 225 105 21 chr20 15375300 15375785 -51292220 - MLT1H LTR MaLR -9 540 15 32 26 0 0 chr20 15376043 15376082 -51291923 + AT_rich Low_complexity Low_complexity 1 39 0 2322 102 0 7 chr20 15377014 15377318 -51290687 + AluSq SINE Alu 1 302 -11 1919 196 63 36 chr20 15378195 15378406 -51289599 - Charlie1b DNA MER1_type -2243 518 314 2087 127 0 19 chr20 15378406 15378713 -51289292 - AluSx SINE Alu -11 301 1 1919 196 63 36 chr20 15378713 15379005 -51289000 - Charlie1b DNA MER1_type -2447 314 1 458 243 62 43 chr20 15379006 15379340 -51288665 - L1ME4a LINE L1 -104 6017 5670 475 227 31 0 chr20 15379340 15379437 -51288568 - L2 LINE L2 -1 3312 3213 22 0 0 0 chr20 15380116 15380138 -51287867 + AT_rich Low_complexity Low_complexity 1 22 0 1527 161 61 18 chr20 15380284 15380563 -51287442 + AluJb SINE Alu 1 291 -21 225 373 106 47 chr20 15380775 15380853 -51287152 + L3 LINE CR1 343 415 -1162 2148 104 0 29 chr20 15380853 15381162 -51286843 + AluY SINE Alu 1 300 -11 225 373 106 47 chr20 15381162 15381319 -51286686 + L3 LINE CR1 415 592 -985 843 168 0 0 chr20 15381536 15381673 -51286332 - AluSg/x SINE Alu -39 273 137 2276 104 0 0 chr20 15381675 15381973 -51286032 - AluY SINE Alu -13 298 1 356 303 51 6 chr20 15382104 15382282 -51285723 - L1MC4a LINE L1 -1898 5910 5725 1958 133 0 23 chr20 15382289 15382590 -51285415 + AluSg SINE Alu 1 294 -16 307 306 195 32 chr20 15383047 15383427 -51284578 + L3 LINE CR1 1066 1568 -9 328 267 86 35 chr20 15383610 15383726 -51284279 - L2 LINE L2 -15 3257 3136 182 317 98 12 chr20 15383870 15383952 -51284053 - L2 LINE L2 -2123 1191 1103 2355 323 143 35 chr20 15383961 15386390 -51281615 - L2 LINE L2 -205 3067 365 375 227 45 0 chr20 15387260 15387348 -51280657 - MIR SINE MIR -88 174 83 462 223 133 48 chr20 15387409 15387575 -51280430 - L1ME3 LINE L1 0 6162 5983 2245 110 0 0 chr20 15387575 15387867 -51280138 - AluSx SINE Alu -10 302 11 253 229 208 42 chr20 15388100 15388196 -51279809 - L2 LINE L2 -20 3293 3182 422 271 49 41 chr20 15388710 15388832 -51279173 - MIR SINE MIR -131 131 9 243 280 88 48 chr20 15389387 15389512 -51278493 - MIR SINE MIR -63 145 16 198 292 283 0 chr20 15389893 15390006 -51277999 - MIR3 SINE MIR -14 194 50 796 154 132 0 chr20 15393141 15393277 -51274728 + FRAM SINE Alu 1 154 -12 2194 92 3 14 chr20 15393969 15394294 -51273711 - AluSc SINE Alu 0 309 1 1909 149 17 3 chr20 15395039 15395335 -51272670 + AluJb SINE Alu 1 300 -12 2588 171 141 2 chr20 15395760 15396257 -51271748 + MLT1F1 LTR MaLR 1 566 -1 404 211 114 60 chr20 15397041 15397207 -51270798 + MIR3 SINE MIR 18 192 -16 290 186 0 17 chr20 15397575 15397634 -51270371 - AluSp SINE Alu -110 193 136 2120 118 7 0 chr20 15397644 15397941 -51270064 - AluSx SINE Alu -13 299 1 467 193 114 54 chr20 15398327 15398493 -51269512 - MIR SINE MIR -22 240 65 250 275 73 28 chr20 15399313 15399422 -51268583 + MIR SINE MIR 2 115 -147 341 167 152 0 chr20 15399936 15400002 -51268003 + MIR SINE MIR 75 150 -112 347 137 0 0 chr20 15400003 15400054 -51267951 + Alu SINE Alu 1 51 -251 1152 98 0 13 chr20 15400055 15400208 -51267797 + AluSg/x SINE Alu 145 295 -17 367 180 90 22 chr20 15400232 15400321 -51267684 + MIR SINE MIR 168 262 0 280 252 170 27 chr20 15400880 15401027 -51266978 - MIR3 SINE MIR -8 200 33 332 155 239 0 chr20 15401282 15401353 -51266652 - MER5B DNA MER1_type -48 130 43 233 290 269 0 chr20 15401595 15401688 -51266317 - L2 LINE L2 -5 3267 3150 183 241 145 36 chr20 15401738 15401821 -51266184 - L2 LINE L2 -15 3298 3207 451 202 11 0 chr20 15402104 15402193 -51265812 - HsTC2 DNA Tc2 -1805 93 4 193 219 0 24 chr20 15402208 15402249 -51265756 - L2 LINE L2 -23 3249 3210 * 286 115 16 98 chr20 15402216 15402277 -51265728 - MIR SINE MIR -24 238 183 363 60 0 0 chr20 15402553 15402603 -51265402 + (TG)n Simple_repeat Simple_repeat 2 51 0 2064 111 3 36 chr20 15402650 15402957 -51265048 + AluSx SINE Alu 1 297 -15 2149 143 0 0 chr20 15402961 15403268 -51264737 + AluSc SINE Alu 3 309 0 268 326 12 23 chr20 15403413 15403499 -51264506 + MER5A DNA MER1_type 104 188 -1 287 297 90 9 chr20 15403598 15403709 -51264296 + LTR16C LTR ERVL 372 491 0 862 180 0 36 chr20 15403762 15403929 -51264076 - FRAM SINE Alu -19 157 1 206 301 168 31 chr20 15403929 15403988 -51264017 - L2 LINE L2 -566 2748 2698 2041 148 3 0 chr20 15403988 15404292 -51263713 + AluSx SINE Alu 1 305 -7 206 301 168 31 chr20 15404292 15404488 -51263517 - L2 LINE L2 -616 2698 2458 995 164 12 18 chr20 15404604 15404775 -51263230 + FRAM SINE Alu 1 167 -9 557 246 221 9 chr20 15404828 15405158 -51262847 - L1ME4a LINE L1 -11 6110 5711 328 267 0 0 chr20 15405171 15405246 -51262759 - L1ME4a LINE L1 -468 5653 5579 401 218 8 81 chr20 15405289 15405413 -51262592 + L2 LINE L2 3198 3312 -1 321 216 235 39 chr20 15405592 15405745 -51262260 + MIR SINE MIR 71 253 -9 508 267 76 82 chr20 15406105 15406446 -51261559 - MLT1I LTR MaLR 0 409 71 3390 168 35 10 chr20 15406669 15407270 -51260735 - L1MB7 LINE L1 0 6184 5569 1832 218 57 11 chr20 15407275 15407753 -51260252 - L1M4 LINE L1 -3463 2683 2184 554 272 76 17 chr20 15407867 15408157 -51259848 - L1ME4a LINE L1 -188 5933 5627 304 291 90 39 chr20 15408767 15408928 -51259077 - L1ME4a LINE L1 -1099 5047 4869 1387 181 96 22 chr20 15408928 15409199 -51258806 - AluJo SINE Alu -17 295 5 304 291 90 39 chr20 15409199 15409271 -51258734 - L1ME4a LINE L1 -1277 4869 4802 2249 100 0 3 chr20 15409465 15409754 -51258251 - AluSq SINE Alu -25 288 1 430 206 0 72 chr20 15409890 15409987 -51258018 + MER21B LTR ERV1 1 90 -773 2966 206 66 56 chr20 15410007 15410792 -51257213 + MER21B LTR ERV1 19 811 -52 255 313 104 22 chr20 15410942 15411076 -51256929 - L2 LINE L2 0 3313 3169 1034 269 119 11 chr20 15411153 15411506 -51256499 - LTR16C LTR ERVL -2 489 99 2286 93 3 3 chr20 15411884 15412184 -51255821 + AluSg SINE Alu 1 300 -10 430 276 109 13 chr20 15412315 15412471 -51255534 + MIR SINE MIR 6 176 -86 2122 122 7 0 chr20 15412770 15413065 -51254940 + AluSx SINE Alu 1 297 -15 1210 164 111 158 chr20 15414146 15414676 -51253329 - MLT1D LTR MaLR 0 505 1 653 283 89 57 chr20 15414899 15415214 -51252791 + LTR16C LTR ERVL 167 491 0 216 267 168 20 chr20 15415698 15415799 -51252206 + MIR SINE MIR 132 247 -15 209 297 0 16 chr20 15415856 15415920 -51252085 + L2 LINE L2 3205 3267 -5 1311 249 129 29 chr20 15415960 15416264 -51251741 + LTR16C LTR ERVL 6 369 -122 1938 145 0 20 chr20 15416264 15416561 -51251444 - AluJo SINE Alu -21 291 1 1311 249 129 29 chr20 15416561 15416698 -51251307 + LTR16C LTR ERVL 369 491 0 901 232 188 77 chr20 15416812 15417317 -51250688 - MER34B LTR ERV1 0 565 5 2303 99 3 7 chr20 15417624 15417928 -51250077 - AluSq SINE Alu -10 303 1 848 189 0 0 chr20 15418335 15418467 -51249538 + FLAM_A SINE Alu 1 132 -1 303 28 0 0 chr20 15418989 15419025 -51248980 + (TG)n Simple_repeat Simple_repeat 2 37 0 809 240 175 17 chr20 15419284 15419728 -51248277 + MLT1H1 LTR MaLR 1 554 -1 567 273 143 5 chr20 15419730 15419946 -51248059 + MIR SINE MIR 7 252 -10 2380 91 0 0 chr20 15420227 15420525 -51247480 - AluSc SINE Alu -5 304 7 1685 164 53 13 chr20 15420564 15420700 -51247305 + AluSx SINE Alu 1 130 -182 2192 97 13 19 chr20 15420700 15421008 -51246997 + AluSc SINE Alu 1 306 -3 1685 164 53 13 chr20 15421008 15421170 -51246835 + AluSx SINE Alu 130 311 -1 545 299 86 0 chr20 15421997 15422171 -51245834 - MIR SINE MIR -50 212 24 477 270 47 0 chr20 15422398 15422546 -51245459 - MIR SINE MIR -7 255 101 2138 106 45 0 chr20 15422548 15422840 -51245165 + AluSx SINE Alu 1 305 -7 1165 81 8 43 chr20 15422877 15423247 -51244758 + (GAA)n Simple_repeat Simple_repeat 1 356 0 1868 212 126 23 chr20 15425020 15425506 -51242499 + MLT1E2 LTR MaLR 91 626 0 1927 142 35 7 chr20 15425580 15425869 -51242136 + AluSx SINE Alu 1 297 -15 450 291 134 0 chr20 15425932 15426104 -51241901 + L2 LINE L2 3118 3312 -1 401 274 84 53 chr20 15427550 15427831 -51240174 - L1ME4a LINE L1 -1 6120 5826 1748 152 0 52 chr20 15427831 15428141 -51239864 - AluJb SINE Alu -18 294 1 401 274 84 53 chr20 15428141 15428180 -51239825 - L1ME4a LINE L1 -295 5826 5790 718 272 107 49 chr20 15428180 15428423 -51239582 - MIR SINE MIR -1 261 5 230 181 167 28 chr20 15428550 15428622 -51239383 - L1ME4a LINE L1 -442 5679 5598 442 255 112 56 chr20 15429172 15429333 -51238672 + L2 LINE L2 3103 3272 0 2375 92 3 0 chr20 15429399 15429702 -51238303 + AluSc SINE Alu 1 304 -5 210 384 10 0 chr20 15429715 15429814 -51238191 - L2 LINE L2 -224 3048 2949 631 271 133 45 chr20 15430133 15430487 -51237518 - MLT1J2 LTR MaLR -2 448 64 1838 145 47 14 chr20 15430760 15431057 -51236948 - AluSx SINE Alu -5 307 1 462 333 5 20 chr20 15433012 15433207 -51234798 + MIR SINE MIR 36 227 -35 184 286 95 19 chr20 15433625 15433730 -51234275 + MIR SINE MIR 72 184 -78 2048 77 31 42 chr20 15434322 15434631 -51233374 - AluSq SINE Alu 0 306 1 1595 255 126 82 chr20 15434704 15435792 -51232213 + L2 LINE L2 1561 2696 -618 1315 181 127 7 chr20 15435792 15436068 -51231937 - AluSg SINE Alu -1 309 1 231 64 43 21 chr20 15436074 15436121 -51231884 + (TA)n Simple_repeat Simple_repeat 2 49 0 876 179 19 0 chr20 15436122 15436278 -51231727 - L1MB8 LINE L1 -5 6173 6015 493 309 101 48 chr20 15436281 15436760 -51231245 + L2 LINE L2 2688 3277 -36 1918 146 0 31 chr20 15437296 15437624 -51230381 - AluJb SINE Alu 0 319 1 2265 98 0 22 chr20 15438313 15438629 -51229376 + AluSc SINE Alu 1 309 0 309 26 0 0 chr20 15440448 15440486 -51227519 + (TG)n Simple_repeat Simple_repeat 2 39 0 306 247 195 26 chr20 15441970 15442124 -51225881 + MIR3 SINE MIR 12 191 -17 504 294 89 6 chr20 15442138 15442318 -51225687 + MIR SINE MIR 2 196 -66 2241 93 26 7 chr20 15443223 15443525 -51224480 - AluSg SINE Alu -2 308 1 22 35 0 0 chr20 15444349 15444378 -51223627 + AT_rich Low_complexity Low_complexity 1 29 0 208 289 37 96 chr20 15445047 15445182 -51222823 - L2 LINE L2 0 3272 3146 2373 107 0 0 chr20 15445268 15445576 -51222429 + AluSx SINE Alu 1 308 -4 287 252 8 106 chr20 15445598 15445721 -51222284 - L2 LINE L2 -186 3086 2976 2201 124 0 0 chr20 15446140 15446439 -51221566 - AluSx SINE Alu -13 299 1 2719 80 0 11 chr20 15446880 15447232 -51220773 + THE1C LTR MaLR 28 375 0 220 302 0 0 chr20 15447232 15447285 -51220720 + GA-rich Low_complexity Low_complexity 2 54 0 538 233 11 130 chr20 15447410 15447609 -51220396 - MER102a DNA MER1_type -1088 329 108 2095 136 3 3 chr20 15447609 15447918 -51220087 - AluSx SINE Alu -3 309 1 538 233 11 130 chr20 15447918 15447968 -51220037 - MER102a DNA MER1_type -1309 108 110 2261 99 0 0 chr20 15447968 15448287 -51219718 - AluSc SINE Alu 0 319 1 538 233 11 130 chr20 15448287 15448305 -51219700 - MER102a DNA MER1_type -1306 111 92 248 175 0 0 chr20 15449794 15449834 -51218171 - MIR SINE MIR -22 240 201 1278 154 0 0 chr20 15449849 15450031 -51217974 - AluJb SINE Alu -129 183 2 690 222 20 0 chr20 15450031 15450184 -51217821 - MIR SINE MIR -98 164 9 433 205 7 106 chr20 15450784 15450935 -51217070 + L1MB5 LINE L1 6037 6172 -2 183 205 0 0 chr20 15451015 15451054 -51216951 + T-rich Low_complexity Low_complexity 1 39 0 2351 94 0 3 chr20 15451445 15451752 -51216253 - AluSx SINE Alu -6 306 1 31 0 0 0 chr20 15451948 15451979 -51216026 + AT_rich Low_complexity Low_complexity 1 31 0 560 205 62 9 chr20 15451979 15452091 -51215914 - FLAM_A SINE Alu -14 119 2 1229 79 6 24 chr20 15452935 15453100 -51214905 - AluSg/x SINE Alu -16 296 135 25 0 0 0 chr20 15453965 15453990 -51214015 + AT_rich Low_complexity Low_complexity 1 25 0 2020 133 0 3 chr20 15453990 15454275 -51213730 - AluSx SINE Alu -23 289 6 21 0 0 0 chr20 15454293 15454314 -51213691 + AT_rich Low_complexity Low_complexity 1 21 0 185 306 48 0 chr20 15454500 15454562 -51213443 + MIR SINE MIR 69 133 -75 253 352 11 0 chr20 15454646 15454734 -51213271 + L2 LINE L2 3184 3272 0 267 268 56 0 chr20 15454749 15454820 -51213185 + MIR3 SINE MIR 131 205 -3 423 38 0 0 chr20 15455228 15455281 -51212724 + (TCCA)n Simple_repeat Simple_repeat 2 54 0 381 235 183 13 chr20 15455308 15455461 -51212544 + MER104 DNA Tc2 2 180 0 2300 97 0 0 chr20 15455650 15455939 -51212066 - AluSc SINE Alu -20 289 1 1029 105 24 4 chr20 15456494 15456673 -51211332 + L1MA6 LINE L1 6092 6289 -11 387 115 13 39 chr20 15456673 15456751 -51211254 + L1MA5A LINE L1 6222 6297 0 1029 105 24 4 chr20 15456751 15456763 -51211242 + L1MA6 LINE L1 6289 6299 -1 1654 190 92 77 chr20 15456926 15457424 -51210581 + MLT1H LTR MaLR 1 547 -2 2769 16 0 13 chr20 15457434 15457747 -51210258 - AluYa5 SINE Alu -2 309 1 206 328 16 0 chr20 15457937 15458001 -51210004 - MIR3 SINE MIR -23 185 121 340 277 26 58 chr20 15458035 15458190 -51209815 + MIR SINE MIR 3 152 -110 2144 121 0 3 chr20 15459128 15459434 -51208571 - AluSg SINE Alu -5 305 1 27 0 0 0 chr20 15459517 15459544 -51208461 + AT_rich Low_complexity Low_complexity 1 27 0 2468 67 0 7 chr20 15460381 15460678 -51207327 + AluY SINE Alu 1 295 -16 2161 128 0 0 chr20 15461233 15461529 -51206476 + AluSx SINE Alu 1 296 -16 275 335 70 19 chr20 15462791 15462949 -51205056 - MIR SINE MIR -12 250 85 2280 91 0 25 chr20 15463254 15463573 -51204432 - AluY SINE Alu 0 311 1 2069 101 3 83 chr20 15463575 15463913 -51204092 - AluSq SINE Alu -2 311 1 2553 66 0 0 chr20 15464137 15464441 -51203564 + AluY SINE Alu 1 304 -7 511 289 69 67 chr20 15464550 15464941 -51203064 + L1M3 LINE L1 423 814 -5489 3712 243 38 33 chr20 15465095 15465216 -51202789 + L1M3 LINE L1 816 935 -5447 192 77 0 0 chr20 15465216 15465242 -51202763 + (CAA)n Simple_repeat Simple_repeat 2 27 0 3712 243 38 33 chr20 15465242 15466014 -51201991 + L1M3 LINE L1 935 1702 -4680 2351 105 7 0 chr20 15466014 15466319 -51201686 + AluSc SINE Alu 1 307 -2 3712 243 38 33 chr20 15466319 15466806 -51201199 + L1M3 LINE L1 1702 2154 -4228 1913 151 3 3 chr20 15466806 15467090 -51200915 + AluSx SINE Alu 12 295 -17 3712 243 38 33 chr20 15467090 15467477 -51200528 + L1M3 LINE L1 2154 2538 -3844 524 213 90 16 chr20 15467477 15467599 -51200406 + MER101B LTR ERV1 1 131 -439 316 173 67 96 chr20 15467854 15467958 -51200047 + MER101 LTR ERV1 374 474 0 8619 196 36 46 chr20 15467958 15468905 -51199100 + L1M3 LINE L1 2535 3490 -2914 2056 149 0 0 chr20 15468905 15469213 -51198792 + AluSx SINE Alu 1 308 -4 8619 196 36 46 chr20 15469213 15469789 -51198216 + L1M3 LINE L1 3490 4070 -2334 1848 167 3 16 chr20 15469789 15470095 -51197910 + AluJb SINE Alu 1 302 -10 8619 196 36 46 chr20 15470095 15470518 -51197487 + L1M3 LINE L1 4070 4496 -1908 1906 162 0 7 chr20 15470518 15470815 -51197190 + AluSx SINE Alu 1 295 -17 2222 107 3 0 chr20 15470817 15471125 -51196880 + AluY SINE Alu 1 309 -2 8619 196 36 46 chr20 15471125 15472345 -51195660 + L1M3 LINE L1 4497 5678 -726 1224 109 0 6 chr20 15472347 15472522 -51195483 + AluSq SINE Alu 138 311 -2 1471 141 8 31 chr20 15472524 15472569 -51195436 + L1M3 LINE L1 5668 5713 -694 180 0 0 0 chr20 15472569 15472589 -51195416 + (CA)n Simple_repeat Simple_repeat 2 21 0 1471 141 8 31 chr20 15472589 15472798 -51195207 + L1M3 LINE L1 5713 5916 -491 540 275 101 31 chr20 15472815 15473073 -51194932 + HAL1 LINE L1 320 595 -1912 181 330 209 27 chr20 15473101 15473359 -51194646 + L2 LINE L2 2454 2758 -556 2274 107 3 0 chr20 15473361 15473669 -51194336 - AluSq SINE Alu -4 309 1 31 26 0 0 chr20 15473671 15473709 -51194296 + AT_rich Low_complexity Low_complexity 1 38 0 413 284 184 27 chr20 15473734 15474065 -51193940 - L1M4 LINE L1 -1887 4259 3877 318 241 46 11 chr20 15474079 15474166 -51193839 - L2 LINE L2 -4 3268 3179 829 180 14 95 chr20 15474167 15474378 -51193627 - MLT1A1 LTR MaLR -171 194 1 353 313 146 71 chr20 15474431 15474994 -51193011 - L1M4 LINE L1 -2270 3876 3272 252 274 0 36 chr20 15475187 15475271 -51192734 + LTR58 LTR ERV1 349 429 -250 339 281 176 36 chr20 15475600 15475686 -51192319 - L1M4 LINE L1 -2988 3158 3085 2625 55 0 0 chr20 15475686 15475997 -51192008 - AluY SINE Alu 0 311 1 339 281 176 36 chr20 15475997 15476131 -51191874 - L1M4 LINE L1 -3061 3085 2907 2336 85 0 19 chr20 15476274 15476590 -51191415 - AluSx SINE Alu -2 310 1 1692 178 0 7 chr20 15476590 15476859 -51191146 - MER66B LTR ERV1 -218 268 2 1293 208 81 75 chr20 15476860 15477341 -51190664 - L1MC5 LINE L1 -760 7201 6718 2167 100 3 13 chr20 15477463 15477764 -51190241 + AluSc SINE Alu 1 298 -11 295 222 47 88 chr20 15477795 15477966 -51190039 - HAL1 LINE L1 -120 2387 2224 1804 116 8 15 chr20 15478195 15478454 -51189551 + AluSx SINE Alu 38 294 -18 371 289 206 44 chr20 15478467 15478647 -51189358 - L3 LINE CR1 -943 634 426 28 22 0 22 chr20 15478849 15478874 -51189131 + AT_rich Low_complexity Low_complexity 1 26 -19 2118 130 3 0 chr20 15478874 15479175 -51188830 + AluSx SINE Alu 1 302 -10 28 22 0 22 chr20 15479175 15479195 -51188810 + AT_rich Low_complexity Low_complexity 26 45 0 2288 86 10 16 chr20 15479937 15480241 -51187764 - AluY SINE Alu -9 302 1 2229 127 0 3 chr20 15480489 15480803 -51187202 - AluSq SINE Alu 0 313 1 2184 107 0 10 chr20 15481308 15481606 -51186399 - AluSx SINE Alu -17 295 1 1613 183 3 17 chr20 15481920 15482209 -51185796 + AluJb SINE Alu 11 295 -17 578 27 27 0 chr20 15482302 15482377 -51185628 + (TTTC)n Simple_repeat Simple_repeat 2 78 0 1848 132 3 66 chr20 15482381 15482714 -51185291 - AluJb SINE Alu 0 312 1 2059 145 0 19 chr20 15482733 15483051 -51184954 - AluJb SINE Alu 0 312 1 242 132 19 0 chr20 15483714 15483767 -51184238 + CT-rich Low_complexity Low_complexity 1 54 0 1864 105 54 22 chr20 15484325 15484601 -51183404 + AluSx SINE Alu 1 285 -27 228 35 0 0 chr20 15484601 15484630 -51183375 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 305 246 80 4 chr20 15484753 15484876 -51183129 - MIR SINE MIR -48 160 20 228 309 0 37 chr20 15485689 15485770 -51182235 + L2 LINE L2 3007 3084 -188 21 0 0 0 chr20 15486259 15486280 -51181725 + AT_rich Low_complexity Low_complexity 1 21 0 230 336 0 17 chr20 15486288 15486407 -51181598 + L1MC/D LINE L1 5814 5930 -1878 251 150 50 0 chr20 15486472 15486532 -51181473 - L1MA8 LINE L1 -241 6050 5988 188 232 98 61 chr20 15486546 15486628 -51181377 - MIR SINE MIR -14 248 164 235 333 0 0 chr20 15486675 15486735 -51181270 - L2 LINE L2 -38 3234 3175 2364 102 3 0 chr20 15486920 15487224 -51180781 - AluSx SINE Alu -7 305 1 203 279 151 35 chr20 15487623 15487709 -51180296 - MIR SINE MIR -154 108 13 1058 242 29 8 chr20 15489132 15489372 -51178633 + MIR SINE MIR 18 262 0 219 69 0 0 chr20 15490783 15490812 -51177193 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 2218 114 0 0 chr20 15491151 15491440 -51176565 + AluSx SINE Alu 1 289 -23 457 283 48 24 chr20 15492018 15492184 -51175821 + MIR SINE MIR 90 259 -3 2010 141 30 7 chr20 15492414 15492718 -51175287 - AluSx SINE Alu -1 311 1 395 222 37 35 chr20 15492803 15492966 -51175039 - MIR SINE MIR -1 261 29 303 301 73 44 chr20 15493044 15493250 -51174755 + MIR SINE MIR 1 212 -50 2261 92 0 30 chr20 15494264 15494567 -51173438 + AluSg1 SINE Alu 1 294 -15 2197 116 7 3 chr20 15494574 15494876 -51173129 + AluSx SINE Alu 1 303 -9 252 100 0 0 chr20 15495197 15495237 -51172768 + (CA)n Simple_repeat Simple_repeat 1 40 0 41 21 0 0 chr20 15495430 15495478 -51172527 + AT_rich Low_complexity Low_complexity 1 48 0 1925 130 4 0 chr20 15495829 15496099 -51171906 - AluSx SINE Alu -41 271 1 579 288 108 9 chr20 15496440 15496662 -51171343 + MIR SINE MIR 19 262 0 23 0 0 0 chr20 15496779 15496802 -51171203 + AT_rich Low_complexity Low_complexity 1 23 0 231 279 0 0 chr20 15497507 15497575 -51170430 - LTR16A1 LTR ERVL -94 363 296 384 216 31 10 chr20 15497683 15497780 -51170225 + HsTC2 DNA Tc2 1800 1898 0 1188 272 81 42 chr20 15497780 15498114 -51169891 - L1MEd LINE L1 -3121 3008 2689 1923 148 50 0 chr20 15498114 15498411 -51169594 + AluSx SINE Alu 1 312 0 1188 272 81 42 chr20 15498411 15498892 -51169113 - L1MEd LINE L1 -3440 2689 2161 791 299 123 68 chr20 15498905 15499041 -51168964 - L1MEd LINE L1 -5052 1067 940 1694 184 3 7 chr20 15499041 15499334 -51168671 - AluJo SINE Alu -2 310 19 791 299 123 68 chr20 15499334 15499484 -51168521 - L1MEd LINE L1 -5179 940 800 2219 105 0 7 chr20 15499484 15499779 -51168226 + AluSx SINE Alu 1 293 -19 791 299 123 68 chr20 15499779 15500492 -51167513 - L1MEd LINE L1 -5319 800 12 345 219 14 82 chr20 15500507 15500599 -51167406 - MER113 DNA MER1_type? -376 145 65 1112 263 61 67 chr20 15500599 15500664 -51167341 - LTR16A LTR ERVL -4 446 382 2316 72 10 7 chr20 15500664 15500971 -51167034 + AluY SINE Alu 1 308 -3 1112 263 61 67 chr20 15500971 15501350 -51166655 - LTR16A LTR ERVL -68 382 5 345 219 14 82 chr20 15501350 15501403 -51166602 - MER113 DNA MER1_type? -456 65 10 201 264 19 0 chr20 15501942 15501995 -51166010 - L2 LINE L2 -8 3305 3252 443 273 136 50 chr20 15503199 15503419 -51164586 + L3 LINE CR1 592 830 -747 187 262 48 48 chr20 15503439 15503523 -51164482 + L3 LINE CR1 799 882 -695 1169 220 54 74 chr20 15503523 15503928 -51164077 + MLT2C1 LTR ERVL 1 397 0 181 184 0 26 chr20 15503948 15503986 -51164019 + L3 LINE CR1 1531 1567 -10 1155 241 99 55 chr20 15504085 15504115 -51163890 + LTR33 LTR ERVL 1 28 -493 2491 51 3 16 chr20 15504115 15504426 -51163579 - AluY SINE Alu -4 307 1 1876 161 0 0 chr20 15504426 15504718 -51163287 - AluSx SINE Alu -20 292 1 1155 241 99 55 chr20 15504718 15505179 -51162826 + LTR33 LTR ERVL 27 515 -6 1046 167 0 74 chr20 15505561 15505676 -51162329 + AluJo SINE Alu 86 177 -136 2183 64 53 0 chr20 15505676 15505957 -51162048 - AluY SINE Alu -15 296 1 1046 167 0 74 chr20 15505957 15506085 -51161920 + AluJo SINE Alu 177 313 0 2163 106 7 0 chr20 15507035 15507358 -51160647 - AluSx SINE Alu 0 325 1 1762 142 40 13 chr20 15507558 15507861 -51160144 + AluSx SINE Alu 1 311 -1 1978 150 8 49 chr20 15507865 15508252 -51159753 - L1MB8 LINE L1 -6 6172 5802 428 208 25 67 chr20 15508259 15508379 -51159626 - MLT1J1 LTR MaLR -130 316 202 202 155 52 0 chr20 15508408 15508466 -51159539 + (CTTTG)n Simple_repeat Simple_repeat 2 62 0 23 0 0 0 chr20 15508516 15508539 -51159466 + AT_rich Low_complexity Low_complexity 1 23 0 2547 130 3 3 chr20 15508599 15508975 -51159030 - L1PB1 LINE L1 0 6151 5776 218 121 61 0 chr20 15508975 15509041 -51158964 + (TA)n Simple_repeat Simple_repeat 2 71 0 2715 119 15 3 chr20 15509041 15509480 -51158525 - L1MC4a LINE L1 -350 5801 5413 319 305 32 0 chr20 15509500 15509595 -51158410 - MLT1J2 LTR MaLR -346 104 7 872 276 151 28 chr20 15509879 15510593 -51157412 - L2 LINE L2 -12 3301 2499 3619 152 102 31 chr20 15510775 15511454 -51156551 + LTR8A LTR ERV1 1 727 0 1756 156 145 16 chr20 15511897 15512270 -51155735 + MER61C LTR ERV1 14 434 0 2412 103 0 0 chr20 15512696 15513006 -51154999 - AluSg SINE Alu 0 310 1 773 209 93 11 chr20 15513280 15513462 -51154543 + MIR SINE MIR 66 262 0 2271 117 0 3 chr20 15513663 15513970 -51154035 - AluSg SINE Alu -4 306 1 2350 109 0 0 chr20 15514290 15514594 -51153411 - AluSq SINE Alu -9 304 1 991 310 62 48 chr20 15514632 15515279 -51152726 - L2 LINE L2 0 3313 2648 1907 97 131 0 chr20 15515279 15515538 -51152467 + AluSx SINE Alu 1 293 -9 991 310 62 48 chr20 15515538 15515665 -51152340 - L2 LINE L2 -665 2648 2524 280 287 23 39 chr20 15515985 15516114 -51151891 + MER87 LTR ERV1 395 521 -20 211 235 111 72 chr20 15516144 15516297 -51151708 - L2 LINE L2 -810 2504 2346 818 178 159 0 chr20 15517029 15517192 -51150813 + MER5A DNA MER1_type 1 189 0 301 107 21 73 chr20 15518474 15518542 -51149463 - LTR27 LTR ERV1 -316 320 266 784 238 6 17 chr20 15518570 15518751 -51149254 - LTR28 LTR ERV1 -841 179 1 897 306 250 6 chr20 15518751 15519267 -51148738 - L2 LINE L2 -371 2943 2302 1034 269 29 101 chr20 15519294 15519780 -51148225 - L2 LINE L2 -1820 1494 1044 772 226 51 14 chr20 15519798 15520015 -51147990 + MER46C DNA MER2_type 16 240 -98 195 42 0 0 chr20 15520105 15520129 -51147876 + (TA)n Simple_repeat Simple_repeat 2 25 0 3763 186 21 68 chr20 15520159 15521135 -51146870 + L1MB2 LINE L1 3579 4509 -1637 7875 180 49 24 chr20 15521135 15522754 -51145251 + MER52A LTR ERV1 1 1755 0 2774 197 20 8 chr20 15522754 15523339 -51144666 + L1MB2 LINE L1 4508 5099 -1047 915 115 126 82 chr20 15523339 15523522 -51144483 - LOR1a LTR ERV1 0 497 307 565 143 133 0 chr20 15523521 15523626 -51144379 - LOR1a LTR ERV1 -376 121 3 * 4214 169 64 30 chr20 15523629 15524010 -51143995 + L1MB2 LINE L1 5097 5464 -707 2411 73 3 13 chr20 15524010 15524324 -51143681 + AluY SINE Alu 1 311 0 4214 169 64 30 chr20 15524324 15524975 -51143030 + L1MB2 LINE L1 5464 6164 -7 532 260 373 17 chr20 15525058 15525578 -51142427 - L2 LINE L2 -2290 1024 320 2712 39 0 3 chr20 15525622 15525934 -51142071 + AluY SINE Alu 1 311 0 1972 98 55 0 chr20 15525974 15526248 -51141757 + AluY SINE Alu 15 303 -8 11509 89 60 11 chr20 15526254 15526470 -51141535 + MER61A-int LTR ERV1 3495 3699 -1518 195 100 0 0 chr20 15526470 15526500 -51141505 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 11509 89 60 11 chr20 15526500 15527375 -51140630 + MER61A-int LTR ERV1 3699 4697 -520 1637 104 22 5 chr20 15527375 15527597 -51140408 + AluSc SINE Alu 1 226 -83 11509 89 60 11 chr20 15527597 15528146 -51139859 + MER61A-int LTR ERV1 4697 5217 0 1849 155 54 33 chr20 15528146 15528482 -51139523 + MER61A LTR ERV1 1 343 0 202 53 0 53 chr20 15529157 15529195 -51138810 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1373 238 100 36 chr20 15529685 15530289 -51137716 - L2 LINE L2 0 3313 2662 560 70 0 0 chr20 15530404 15530475 -51137530 - MADE1 DNA Mariner -9 71 1 187 71 0 0 chr20 15530547 15530575 -51137430 + L2 LINE L2 3244 3271 -1 24 0 0 0 chr20 15530770 15530794 -51137211 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr20 15531706 15531731 -51136274 + AT_rich Low_complexity Low_complexity 1 25 0 1865 153 7 3 chr20 15531735 15532029 -51135976 - AluSx SINE Alu -17 295 1 1725 178 3 3 chr20 15532222 15532515 -51135490 + AluJb SINE Alu 1 293 -19 26 0 0 0 chr20 15532637 15532663 -51135342 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr20 15532879 15532903 -51135102 + AT_rich Low_complexity Low_complexity 1 24 0 9599 85 18 14 chr20 15532954 15533284 -51134721 + HSMAR1 DNA Mariner 9 336 -951 2091 60 74 28 chr20 15533284 15533567 -51134438 + AluY SINE Alu 3 298 -13 9599 85 18 14 chr20 15533567 15534510 -51133495 + HSMAR1 DNA Mariner 336 1287 0 280 183 97 11 chr20 15535462 15535555 -51132450 + Charlie7 DNA MER1_type 2443 2543 -69 290 216 171 11 chr20 15535740 15535828 -51132177 - MIR SINE MIR -148 114 13 872 181 130 80 chr20 15536788 15537264 -51130741 + MLT1H LTR MaLR 5 545 -4 2051 145 3 10 chr20 15537411 15537722 -51130283 + AluSg SINE Alu 1 309 -1 261 0 0 0 chr20 15538019 15538048 -51129957 + (A)n Simple_repeat Simple_repeat 1 29 0 2232 115 3 0 chr20 15538062 15538367 -51129638 + AluSx SINE Alu 1 306 -6 833 199 26 87 chr20 15538427 15538506 -51129499 - MER115 DNA AcHobo -1 4030 3948 2047 122 0 14 chr20 15538506 15538801 -51129204 - AluSg SINE Alu -19 291 1 833 199 26 87 chr20 15538801 15538978 -51129027 - MER115 DNA AcHobo -83 3948 452 180 0 0 0 chr20 15538982 15539002 -51129003 + (CACCC)n Simple_repeat Simple_repeat 2 21 0 2195 69 4 7 chr20 15539075 15539351 -51128654 - AluSp SINE Alu -8 305 31 2328 83 0 17 chr20 15540300 15540602 -51127403 + AluSc SINE Alu 1 297 -12 1410 139 14 0 chr20 15540602 15540825 -51127180 - Tigger1 DNA MER2_type -2192 226 1 2127 137 0 3 chr20 15540897 15541247 -51126758 - AluSx SINE Alu 0 349 1 352 224 51 31 chr20 15541319 15541417 -51126588 + MIR SINE MIR 97 196 -66 2303 110 0 3 chr20 15541507 15541808 -51126197 - AluSg SINE Alu -10 300 1 317 188 0 0 chr20 15543003 15543051 -51124954 + L2 LINE L2 3209 3256 -16 186 286 157 0 chr20 15544077 15544147 -51123858 + MIR SINE MIR 168 248 -14 223 303 0 15 chr20 15544411 15544477 -51123528 + L2 LINE L2 3249 3313 0 441 310 22 30 chr20 15544927 15545159 -51122846 - L1MC/D LINE L1 -2053 5738 5509 2147 126 3 0 chr20 15545178 15545471 -51122534 + AluSq SINE Alu 1 294 -19 28 71 0 0 chr20 15545482 15545538 -51122467 + AT_rich Low_complexity Low_complexity 1 56 0 508 267 74 86 chr20 15545588 15546044 -51121961 - L1MC/D LINE L1 -747 5382 4922 1914 141 0 31 chr20 15546044 15546362 -51121643 - AluSx SINE Alu 0 309 1 508 267 74 86 chr20 15546362 15547036 -51120969 - L1MC/D LINE L1 -1207 4922 4357 1186 263 66 70 chr20 15547113 15547890 -51120115 - HAL1 LINE L1 -743 1764 991 561 167 0 39 chr20 15547943 15548045 -51119960 - U6 snRNA snRNA 0 107 10 311 304 62 53 chr20 15548321 15548548 -51119457 - L1MC/D LINE L1 -5446 673 445 2040 124 38 0 chr20 15549103 15549393 -51118612 - AluSx SINE Alu -9 303 3 21 57 0 0 chr20 15550157 15550192 -51117813 + AT_rich Low_complexity Low_complexity 1 35 0 211 333 73 49 chr20 15550268 15550391 -51117614 - L2 LINE L2 -5 3267 3142 826 149 0 57 chr20 15550472 15550613 -51117392 - FLAM_C SINE Alu 0 143 11 2152 93 4 0 chr20 15550620 15550925 -51117080 - AluSg SINE Alu 0 308 3 287 310 168 0 chr20 15551504 15551617 -51116388 + MIR3 SINE MIR 40 171 -37 230 308 169 30 chr20 15551776 15552013 -51115992 - L2 LINE L2 -1020 2294 2025 5952 170 19 71 chr20 15552436 15553007 -51114998 + L1MA7 LINE L1 4443 5042 -1249 4629 135 29 52 chr20 15553007 15553404 -51114601 + L1MA5 LINE L1 5460 5865 -435 1955 151 3 10 chr20 15553404 15553716 -51114289 + AluSx SINE Alu 3 312 0 4629 135 29 52 chr20 15553716 15554179 -51113826 + L1MA5 LINE L1 5865 6300 0 5952 170 19 71 chr20 15554179 15554855 -51113150 + L1MA7 LINE L1 5042 5751 -540 2121 104 29 0 chr20 15554855 15555135 -51112870 - AluSx SINE Alu -24 288 1 5952 170 19 71 chr20 15555135 15555588 -51112417 + L1MA7 LINE L1 5751 5949 -342 2205 107 3 16 chr20 15555588 15555896 -51112109 + AluSq SINE Alu 1 304 -9 5952 170 19 71 chr20 15555896 15556218 -51111787 + L1MA7 LINE L1 5949 6286 -5 1824 177 7 0 chr20 15556856 15557156 -51110849 + AluJo SINE Alu 1 302 -10 2419 82 3 3 chr20 15557372 15557676 -51110329 + AluSc SINE Alu 1 304 -5 2307 105 3 3 chr20 15558135 15558448 -51109557 - AluSp SINE Alu 0 313 1 268 308 104 76 chr20 15558582 15558647 -51109358 + L2 LINE L2 1792 1854 -1460 2214 99 14 0 chr20 15558647 15558939 -51109066 - AluSx SINE Alu -16 296 1 268 308 104 76 chr20 15558939 15559162 -51108843 + L2 LINE L2 1854 2088 -1226 207 162 0 0 chr20 15559272 15559309 -51108696 + CT-rich Low_complexity Low_complexity 2 38 0 * 215 100 0 25 chr20 15559301 15559341 -51108664 + (TCCCC)n Simple_repeat Simple_repeat 5 43 0 2161 122 21 3 chr20 15559434 15559769 -51108236 - L1MA5 LINE L1 0 6300 5960 263 332 125 72 chr20 15559769 15560314 -51107691 + L2 LINE L2 2688 3260 -12 2771 167 61 6 chr20 15560323 15560862 -51107143 - L1MB8 LINE L1 -60 6118 5550 5198 180 34 92 chr20 15560866 15561427 -51106578 - L1MB5 LINE L1 -6 6176 5584 500 56 11 124 chr20 15561427 15561465 -51106540 + MADE1 DNA Mariner 2 26 -54 2405 68 3 0 chr20 15561465 15561758 -51106247 - AluY SINE Alu -17 294 1 500 56 11 124 chr20 15561758 15561808 -51106197 + MADE1 DNA Mariner 26 80 0 5198 180 34 92 chr20 15561808 15561972 -51106033 - L1MB5 LINE L1 -598 5584 5412 2271 92 0 16 chr20 15561972 15562275 -51105730 - AluSc SINE Alu -11 298 1 5198 180 34 92 chr20 15562275 15562815 -51105190 - L1MB5 LINE L1 -770 5412 4842 743 181 0 60 chr20 15562815 15562964 -51105041 - FLAM_C SINE Alu -2 141 2 5198 180 34 92 chr20 15562964 15563358 -51104647 - L1MB5 LINE L1 -1340 4842 4427 2038 113 3 11 chr20 15563358 15563669 -51104336 + AluSq SINE Alu 3 311 0 5198 180 34 92 chr20 15563669 15564429 -51103576 - L1MB5 LINE L1 -1755 4427 3802 501 167 0 0 chr20 15564451 15564523 -51103482 - tRNA-Glu-GAG tRNA tRNA -3 72 1 1486 203 103 32 chr20 15565964 15566334 -51101671 - MLT1D LTR MaLR -2 503 108 1801 156 0 48 chr20 15566338 15566652 -51101353 + AluSx SINE Alu 1 299 -13 212 315 18 45 chr20 15566689 15566800 -51101205 - L2 LINE L2 -218 3095 2988 2370 98 0 0 chr20 15566849 15567144 -51100861 + AluSq SINE Alu 1 295 -18 1141 199 112 64 chr20 15567296 15567653 -51100352 - MLT1A2 LTR MaLR 0 374 1 501 309 143 41 chr20 15567663 15568054 -51099951 - L2 LINE L2 -559 2755 2325 197 245 0 20 chr20 15568569 15568618 -51099387 + L2 LINE L2 3017 3064 -208 1895 123 58 3 chr20 15568656 15568948 -51099057 + AluSq SINE Alu 1 308 -5 301 292 44 84 chr20 15569779 15570029 -51097976 + L1M2 LINE L1 784 1023 -5826 212 189 57 0 chr20 15570457 15570510 -51097495 + G-rich Low_complexity Low_complexity 1 56 0 220 315 11 11 chr20 15570577 15570666 -51097339 + (CG)n Simple_repeat Simple_repeat 2 90 0 28 0 0 0 chr20 15572465 15572493 -51095512 + AT_rich Low_complexity Low_complexity 1 28 0 2242 100 0 3 chr20 15573301 15573601 -51094404 + AluSg SINE Alu 1 299 -11 450 245 29 0 chr20 15574044 15574146 -51093859 - MIR SINE MIR 0 262 158 489 242 81 34 chr20 15574172 15574321 -51093684 + MIR SINE MIR 16 171 -91 209 176 0 0 chr20 15574319 15574353 -51093652 - MIR SINE MIR -134 128 95 * 1160 79 0 0 chr20 15574510 15574650 -51093355 + AluSc SINE Alu 150 289 -20 732 287 118 22 chr20 15574926 15575428 -51092577 - Charlie7 DNA MER1_type -2051 561 12 531 234 133 37 chr20 15575769 15575957 -51092048 + MIR SINE MIR 45 250 -12 1709 161 67 85 chr20 15576176 15576612 -51091393 - MSTA LTR MaLR 0 428 1 239 231 165 74 chr20 15578450 15578571 -51089434 + MIR3 SINE MIR 6 137 -71 1210 147 118 0 chr20 15578636 15578847 -51089158 - MER46A DNA MER2_type 0 236 1 25 31 0 0 chr20 15579293 15579325 -51088680 + AT_rich Low_complexity Low_complexity 1 32 0 1912 136 7 14 chr20 15580230 15580525 -51087480 - AluSx SINE Alu -16 296 4 2022 156 12 6 chr20 15580579 15580925 -51087080 + MER7A DNA MER2_type 1 346 0 1506 191 35 85 chr20 15580934 15581558 -51086447 - L1MC5 LINE L1 -101 7860 7268 819 201 73 19 chr20 15581690 15581966 -51086039 - L1MC4 LINE L1 -728 7233 6959 209 274 20 0 chr20 15581993 15582044 -51085961 + CT-rich Low_complexity Low_complexity 5 56 0 205 215 31 31 chr20 15582181 15582246 -51085759 + (TAGA)n Simple_repeat Simple_repeat 3 67 0 21 0 0 0 chr20 15582590 15582611 -51085394 + AT_rich Low_complexity Low_complexity 1 21 0 7630 155 16 23 chr20 15582620 15584780 -51083225 + L1PA11 LINE L1 3999 6174 0 13819 125 53 25 chr20 15584809 15586158 -51081847 - Tigger2 DNA MER2_type -151 2567 1258 2349 67 0 7 chr20 15586158 15586456 -51081549 - AluY SINE Alu -15 296 1 13819 125 53 25 chr20 15586456 15586539 -51081466 - Tigger2 DNA MER2_type -1460 1258 1179 1907 160 7 0 chr20 15586539 15586832 -51081173 - AluSx SINE Alu -15 297 3 13819 125 53 25 chr20 15586832 15587894 -51080111 - Tigger2 DNA MER2_type -1539 1179 1 2513 63 0 0 chr20 15587897 15588199 -51079806 - AluY SINE Alu -9 302 1 1799 84 38 11 chr20 15588302 15588565 -51079440 - AluSq SINE Alu -7 306 37 1789 161 39 16 chr20 15589418 15589723 -51078282 - AluJb SINE Alu 0 312 1 6902 207 100 20 chr20 15589772 15589927 -51078078 - L1MB4 LINE L1 0 6678 6537 1475 199 27 17 chr20 15589927 15590224 -51077781 + AluJo SINE Alu 1 300 -12 6902 207 100 20 chr20 15590224 15593191 -51074814 - L1MB4 LINE L1 -141 6537 3311 399 191 136 0 chr20 15593200 15593347 -51074658 - L1MB4 LINE L1 -5251 1395 1229 803 164 121 39 chr20 15593418 15593650 -51074355 - LTR45B LTR ERV1 -14 475 225 2573 151 50 74 chr20 15593737 15593905 -51074100 - LTR8A LTR ERV1 0 727 556 1972 129 7 14 chr20 15593905 15594200 -51073805 - AluY SINE Alu -18 293 1 2573 151 50 74 chr20 15594200 15594692 -51073313 - LTR8A LTR ERV1 -171 556 83 2332 91 0 0 chr20 15594818 15595114 -51072891 + AluSp SINE Alu 1 296 -17 379 170 170 105 chr20 15595132 15595438 -51072567 - L1MB4 LINE L1 -5380 1162 837 364 207 22 7 chr20 15595510 15595611 -51072394 - L1MB4 LINE L1 -5746 900 611 2524 63 0 0 chr20 15595612 15595914 -51072091 - AluY SINE Alu -7 304 3 316 233 48 10 chr20 15596302 15596405 -51071600 - MLT1J2 LTR MaLR 0 450 344 482 241 8 77 chr20 15596542 15596748 -51071257 - MLT1J1 LTR MaLR -237 213 16 512 176 92 142 chr20 15596811 15597072 -51070933 - HsTC2a DNA Tc2 -35 707 460 27196 115 34 71 chr20 15597076 15603485 -51064520 - L1PA10 LINE L1 0 6168 12 1276 234 67 46 chr20 15603488 15603949 -51064056 - HsTC2a DNA Tc2 -263 481 11 385 329 84 32 chr20 15604152 15604401 -51063604 + L3 LINE CR1 1304 1565 -12 1411 204 4 22 chr20 15604696 15604965 -51063040 - AluJo SINE Alu -48 264 1 1947 139 0 17 chr20 15605023 15605325 -51062680 - AluSx SINE Alu -3 309 13 192 77 0 0 chr20 15605369 15605395 -51062610 + (TCCC)n Simple_repeat Simple_repeat 2 27 0 247 254 315 22 chr20 15606449 15606630 -51061375 - MIR SINE MIR -14 248 15 442 308 117 29 chr20 15606744 15607292 -51060713 - L1ME LINE L1 -266 5855 5272 602 281 138 0 chr20 15607336 15607539 -51060466 + MIR SINE MIR 11 241 -21 325 354 48 34 chr20 15607866 15608072 -51059933 - L1ME LINE L1 -1300 4846 4638 440 289 86 39 chr20 15608496 15608583 -51059422 - L1MC4a LINE L1 -301 5820 5739 2322 62 0 10 chr20 15608583 15608901 -51059104 - AluY SINE Alu 0 311 1 440 289 86 39 chr20 15608901 15609255 -51058750 - L1MC4a LINE L1 -382 5739 5456 370 153 97 0 chr20 15609321 15609393 -51058612 - MIR SINE MIR -1 261 183 240 309 12 0 chr20 15609820 15609904 -51058101 - L1MC4a LINE L1 -1982 4164 4080 2504 54 0 0 chr20 15610488 15610783 -51057222 + AluY SINE Alu 1 295 -16 197 328 0 0 chr20 15610909 15610970 -51057035 + L2 LINE L2 3205 3265 -7 * 265 258 141 55 chr20 15610944 15611072 -51056933 - MER5A DNA MER1_type -4 185 47 1049 171 6 0 chr20 15611322 15611503 -51056502 - AluJb SINE Alu -43 269 88 936 178 62 40 chr20 15612362 15612587 -51055418 + AluJo SINE Alu 2 231 -81 2241 92 3 7 chr20 15612642 15612936 -51055069 + AluSx SINE Alu 3 295 -17 961 223 42 0 chr20 15612959 15613152 -51054853 - MIR SINE MIR -21 241 41 2542 139 78 95 chr20 15614721 15615046 -51052959 - MER7C DNA MER2_type -2426 602 290 1154 80 0 0 chr20 15615046 15615196 -51052809 - L1PB1 LINE L1 -6 6145 5996 2542 139 78 95 chr20 15615196 15615482 -51052523 - MER7C DNA MER2_type -2738 290 1 304 285 252 33 chr20 15616599 15616841 -51051164 + HAL1 LINE L1 826 1120 -1387 2482 187 74 135 chr20 15616980 15617128 -51050877 - MER21A LTR ERV1 -6 925 770 1910 141 20 23 chr20 15617128 15617427 -51050578 - AluSx SINE Alu -14 298 1 2482 187 74 135 chr20 15617427 15617546 -51050459 - MER21A LTR ERV1 -161 770 645 1960 163 0 3 chr20 15617546 15617847 -51050158 - AluJo SINE Alu -12 300 1 2482 187 74 135 chr20 15617847 15618551 -51049454 - MER21A LTR ERV1 -286 645 12 242 197 49 0 chr20 15618558 15618619 -51049386 + L1MEd LINE L1 324 387 -5732 3599 98 159 111 chr20 15618646 15619976 -51048029 - pTR5 LTR ERV1 0 2438 742 900 277 73 52 chr20 15619980 15620611 -51047394 + L1MEd LINE L1 415 1058 -5061 244 295 39 8 chr20 15620816 15620945 -51047060 + HAL1b LINE L1 368 1568 -848 387 310 76 0 chr20 15621016 15621174 -51046831 + L1MC4a LINE L1 5477 5646 -516 264 220 35 165 chr20 15621216 15621343 -51046662 + MER112 DNA MER1_type 81 174 -86 378 0 0 0 chr20 15621343 15621385 -51046620 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 264 220 35 165 chr20 15621385 15621457 -51046548 + MER112 DNA MER1_type 174 254 -6 257 315 0 0 chr20 15621476 15621584 -51046421 + L1MC4a LINE L1 5681 5788 -2020 2426 80 0 32 chr20 15621792 15622103 -51045902 + AluSg SINE Alu 1 301 -9 331 274 81 24 chr20 15622306 15622430 -51045575 + L1MEd LINE L1 1025 1155 -4964 350 330 47 60 chr20 15622538 15622709 -51045296 + HAL1 LINE L1 1401 1570 -937 2356 161 19 30 chr20 15622709 15623175 -51044830 - LOR1b LTR ERV1 0 461 1 350 330 47 60 chr20 15623175 15623236 -51044769 + HAL1 LINE L1 1570 1630 -877 26 30 0 0 chr20 15623261 15623294 -51044711 + AT_rich Low_complexity Low_complexity 1 33 0 204 67 0 0 chr20 15623802 15623832 -51044173 + (A)n Simple_repeat Simple_repeat 1 30 0 2034 106 6 48 chr20 15624086 15624397 -51043608 + AluSq SINE Alu 1 298 -15 2280 84 0 10 chr20 15624434 15624732 -51043273 + AluSq SINE Alu 6 300 -13 344 308 119 63 chr20 15625198 15625547 -51042458 + L1MEd LINE L1 841 1178 -1329 377 314 174 4 chr20 15625606 15625842 -51042163 + L1MC4a LINE L1 5787 6062 -1746 24 32 0 0 chr20 15627028 15627059 -51040946 + AT_rich Low_complexity Low_complexity 1 31 0 204 219 0 0 chr20 15627683 15627724 -51040281 + T-rich Low_complexity Low_complexity 5 45 0 21 36 0 0 chr20 15628489 15628517 -51039488 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr20 15628669 15628697 -51039308 + AT_rich Low_complexity Low_complexity 1 28 0 312 301 48 63 chr20 15629214 15629420 -51038585 - L2 LINE L2 -1244 2070 1868 23 33 0 0 chr20 15630135 15630165 -51037840 + AT_rich Low_complexity Low_complexity 1 30 0 289 313 109 34 chr20 15630423 15630570 -51037435 + L2 LINE L2 3115 3272 0 346 333 87 36 chr20 15631078 15631525 -51036480 - L1M4 LINE L1 -3103 3043 2574 1898 231 68 84 chr20 15631644 15632849 -51035156 + L1ME3A LINE L1 4897 6161 -9 28 0 0 0 chr20 15632890 15632918 -51035087 + AT_rich Low_complexity Low_complexity 1 28 0 206 254 0 30 chr20 15633086 15633153 -51034852 + T-rich Low_complexity Low_complexity 2 66 0 2467 81 0 10 chr20 15633259 15633569 -51034436 - AluSc SINE Alu -2 307 1 587 286 148 24 chr20 15633941 15634273 -51033732 - L2 LINE L2 -2 3311 2939 586 322 150 10 chr20 15634284 15634598 -51033407 - L2 LINE L2 -1 3312 2955 238 186 0 129 chr20 15634791 15634861 -51033144 - MLT1J LTR MaLR -109 402 342 437 293 38 25 chr20 15635082 15635239 -51032766 - L2 LINE L2 -2933 381 223 223 346 74 31 chr20 15636877 15637039 -51030966 - L2 LINE L2 -5 3308 3140 263 329 102 0 chr20 15637090 15637227 -51030778 - L2 LINE L2 -260 3012 2862 217 267 107 61 chr20 15637281 15637412 -51030593 - L2 LINE L2 -722 2592 2456 263 308 88 50 chr20 15637834 15638016 -51029989 - MLT1J2 LTR MaLR -6 444 256 584 348 182 15 chr20 15638058 15638099 -51029906 + L2 LINE L2 1868 1901 -1413 1244 121 226 46 chr20 15638099 15638365 -51029640 + MER46B DNA MER2_type 1 205 -2526 1924 150 3 0 chr20 15638365 15638651 -51029354 - AluJb SINE Alu -22 290 4 1244 121 226 46 chr20 15638651 15638690 -51029315 + MER46B DNA MER2_type 205 236 0 584 348 182 15 chr20 15638690 15639334 -51028671 + L2 LINE L2 1901 2668 -646 819 251 76 5 chr20 15640200 15640411 -51027594 - MIR SINE MIR -11 251 26 373 240 0 0 chr20 15640563 15640638 -51027367 + MIR SINE MIR 67 141 -121 374 302 126 5 chr20 15641168 15641383 -51026622 + MER112 DNA MER1_type 8 248 -12 2349 82 0 3 chr20 15641433 15641738 -51026267 - AluY SINE Alu -7 304 1 2279 95 3 0 chr20 15641751 15642047 -51025958 - AluSc SINE Alu -11 298 2 445 258 65 32 chr20 15642448 15642572 -51025433 + MIR SINE MIR 2 129 -133 182 314 96 32 chr20 15643196 15643352 -51024653 - L2 LINE L2 -219 3053 2888 1962 125 7 0 chr20 15643566 15643874 -51024131 - AluSx SINE Alu 0 310 1 609 270 60 75 chr20 15643889 15644141 -51023864 + MER102b DNA MER1_type 79 326 -15 512 222 248 36 chr20 15644417 15644778 -51023227 + MLT1H LTR MaLR 119 583 -12 189 0 0 0 chr20 15644951 15644972 -51023033 + (TG)n Simple_repeat Simple_repeat 2 22 0 325 151 27 14 chr20 15645585 15645658 -51022347 - MLT1H LTR MaLR -5 544 471 2419 85 0 0 chr20 15645880 15646187 -51021818 - AluY SINE Alu -4 307 1 890 138 0 0 chr20 15646415 15646538 -51021467 + FLAM_C SINE Alu 1 123 -20 190 279 213 0 chr20 15647007 15647068 -51020937 + MIR SINE MIR 4 77 -185 576 250 45 34 chr20 15647095 15647271 -51020734 + MIR SINE MIR 42 219 -43 2393 71 3 0 chr20 15647281 15647576 -51020429 + AluY SINE Alu 1 296 -15 2238 116 3 0 chr20 15647681 15647974 -51020031 + AluSx SINE Alu 1 294 -18 632 233 70 54 chr20 15648029 15648287 -51019718 - LTR37A LTR ERV1 -122 304 43 1670 189 102 50 chr20 15648493 15648935 -51019070 + MER31B LTR ERV1 1 543 0 12310 193 84 76 chr20 15648985 15649377 -51018628 + MER31B-int LTR ERV1 15 402 -4534 3876 185 35 1 chr20 15649377 15650085 -51017920 + MER44D DNA MER2_type 1 604 -1 12310 193 84 76 chr20 15650085 15650996 -51017009 + MER31B-int LTR ERV1 402 1304 -3632 1757 129 3 93 chr20 15650996 15651306 -51016699 + AluJb SINE Alu 1 282 -30 12310 193 84 76 chr20 15651306 15652517 -51015488 + MER31B-int LTR ERV1 1304 2504 -2432 2535 70 3 0 chr20 15652517 15652829 -51015176 - AluSp SINE Alu 0 313 1 12310 193 84 76 chr20 15652829 15653029 -51014976 + MER31B-int LTR ERV1 2504 2701 -2235 2305 92 0 3 chr20 15653029 15653335 -51014670 - AluSq SINE Alu -8 305 1 12310 193 84 76 chr20 15653335 15654476 -51013529 + MER31B-int LTR ERV1 2701 3904 -1032 247 209 0 0 chr20 15654492 15654535 -51013470 + Charlie3 DNA MER1_type 56 98 -2612 * 371 191 0 0 chr20 15654532 15654595 -51013410 + Charlie3 DNA MER1_type 2623 2685 -25 1645 158 48 41 chr20 15654603 15654789 -51013216 + MER31B-int LTR ERV1 3892 4082 -854 2474 82 0 0 chr20 15654789 15655093 -51012912 + AluY SINE Alu 1 304 -7 1645 158 48 41 chr20 15655093 15655222 -51012783 + MER31B-int LTR ERV1 4082 4209 -727 292 210 136 12 chr20 15655241 15655322 -51012683 + LTR37A LTR ERV1 1 91 -335 959 186 16 78 chr20 15655333 15655575 -51012430 + MER31B-int LTR ERV1 4340 4566 -370 1678 201 64 39 chr20 15655608 15656061 -51011944 + MER31B LTR ERV1 1 661 0 2264 83 0 49 chr20 15656795 15657119 -51010886 - AluSc SINE Alu -1 308 1 30 27 0 0 chr20 15657641 15657678 -51010327 + AT_rich Low_complexity Low_complexity 1 37 0 2196 101 31 0 chr20 15657777 15658065 -51009940 + AluSq SINE Alu 1 297 -16 413 273 55 0 chr20 15658137 15658247 -51009758 - MIR SINE MIR -136 126 11 2217 58 65 3 chr20 15658428 15658719 -51009286 + AluY SINE Alu 3 311 0 1716 113 0 128 chr20 15659468 15659803 -51008202 + AluSx SINE Alu 1 292 -10 23 33 0 0 chr20 15660202 15660232 -51007773 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr20 15660396 15660424 -51007581 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr20 15660864 15660889 -51007116 + AT_rich Low_complexity Low_complexity 1 25 0 464 213 0 0 chr20 15661071 15661165 -51006840 - MER92B LTR ERV1 0 636 543 1177 215 124 43 chr20 15661184 15661556 -51006449 - MER92B LTR ERV1 -233 403 2 2073 124 3 10 chr20 15661740 15662038 -51005967 + AluSx SINE Alu 1 296 -16 263 229 36 6 chr20 15662480 15662646 -51005359 + (TA)n Simple_repeat Simple_repeat 1 171 0 22 0 0 0 chr20 15662650 15662672 -51005333 + AT_rich Low_complexity Low_complexity 1 22 0 2414 77 0 3 chr20 15662677 15662975 -51005030 + AluSc SINE Alu 2 298 -11 244 263 26 9 chr20 15663007 15663121 -51004884 + (TA)n Simple_repeat Simple_repeat 2 117 0 214 300 146 27 chr20 15663132 15663242 -51004763 - L3 LINE CR1 -224 1353 1231 390 246 108 0 chr20 15664375 15664505 -51003500 - L1MD2 LINE L1 -2 6357 6214 973 151 104 0 chr20 15664519 15664711 -51003294 - L1PA16 LINE L1 -17 6149 5938 692 240 64 80 chr20 15664705 15664920 -51003085 - L1MD2 LINE L1 -131 6228 6018 * 2344 94 0 0 chr20 15664920 15665217 -51002788 + AluSg SINE Alu 1 297 -13 692 240 64 80 chr20 15665217 15665314 -51002691 - L1MD2 LINE L1 -341 6018 5921 2476 149 39 5 chr20 15665332 15665909 -51002096 - L1M2 LINE L1 -577 5714 5115 1629 153 44 26 chr20 15665913 15666253 -51001752 + L1MA7 LINE L1 5940 6285 -6 1230 244 16 142 chr20 15666270 15666974 -51001031 - L1MB3 LINE L1 -255 5928 5314 334 303 126 11 chr20 15667253 15667428 -51000577 + MIR SINE MIR 64 258 -4 1656 179 3 27 chr20 15667718 15668014 -50999991 - AluJo SINE Alu -23 289 1 213 292 99 109 chr20 15668560 15668752 -50999253 - L2 LINE L2 -493 2821 2632 295 350 43 21 chr20 15669038 15669224 -50998781 + L2 LINE L2 1840 2029 -1285 366 247 0 34 chr20 15670097 15670186 -50997819 - MIR SINE MIR -121 141 56 1853 158 20 7 chr20 15670992 15671290 -50996715 - AluSx SINE Alu -10 302 1 601 283 23 74 chr20 15672160 15672302 -50995703 + MIR SINE MIR 10 135 -127 1953 128 52 6 chr20 15672302 15672647 -50995358 - MER46B DNA MER2_type 0 236 1 601 283 23 74 chr20 15672647 15672762 -50995243 + MIR SINE MIR 135 254 -8 1538 253 89 45 chr20 15673509 15673625 -50994380 - L1ME3A LINE L1 -3 6167 6058 2390 86 0 0 chr20 15673625 15673917 -50994088 + AluSg SINE Alu 1 292 -18 1538 253 89 45 chr20 15673917 15674465 -50993540 - L1ME3A LINE L1 -112 6058 5474 44 20 0 0 chr20 15675224 15675275 -50992730 + AT_rich Low_complexity Low_complexity 1 51 0 508 99 56 12 chr20 15675275 15675437 -50992568 + (TA)n Simple_repeat Simple_repeat 1 169 0 208 53 53 0 chr20 15675449 15675487 -50992518 + (TATAA)n Simple_repeat Simple_repeat 5 44 0 25 51 0 0 chr20 15675487 15675526 -50992479 + AT_rich Low_complexity Low_complexity 1 39 0 23 0 0 0 chr20 15675649 15675672 -50992333 + AT_rich Low_complexity Low_complexity 1 23 0 459 311 25 0 chr20 15675904 15676023 -50991982 - L2 LINE L2 -4 3309 3188 25 0 0 0 chr20 15676046 15676071 -50991934 + AT_rich Low_complexity Low_complexity 1 25 0 2395 88 0 3 chr20 15676621 15676929 -50991076 - AluSc SINE Alu -2 307 1 688 278 40 5 chr20 15678388 15678611 -50989394 - L1ME LINE L1 -299 5822 5592 280 246 0 15 chr20 15678617 15678682 -50989323 + (CA)n Simple_repeat Simple_repeat 2 65 0 236 261 155 31 chr20 15678682 15678843 -50989162 - L1ME LINE L1 -533 5588 5408 25 0 0 0 chr20 15679690 15679715 -50988290 + AT_rich Low_complexity Low_complexity 1 25 0 19836 154 47 12 chr20 15679720 15687143 -50980862 + L1MA2 LINE L1 24 7723 0 21 57 0 0 chr20 15687230 15687265 -50980740 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr20 15688526 15688558 -50979447 + AT_rich Low_complexity Low_complexity 1 32 0 379 299 56 0 chr20 15690937 15691044 -50976961 + L2 LINE L2 3160 3272 0 21 71 0 0 chr20 15691151 15691193 -50976812 + AT_rich Low_complexity Low_complexity 1 42 0 2439 77 0 0 chr20 15691414 15691711 -50976294 + AluSc SINE Alu 1 297 -12 193 330 138 0 chr20 15691950 15692044 -50975961 + L2 LINE L2 3193 3299 -14 393 203 143 60 chr20 15692448 15692581 -50975424 + MLT1E1 LTR MaLR 1 144 -510 533 182 20 0 chr20 15692669 15692768 -50975237 + MLT1E3 LTR MaLR 524 624 0 2339 95 0 7 chr20 15693470 15693775 -50974230 - AluSx SINE Alu -9 303 1 2257 116 0 7 chr20 15693787 15694097 -50973908 - AluSq SINE Alu -5 308 1 5717 80 26 20 chr20 15694449 15694554 -50973451 + L1PA8A LINE L1 5254 5357 -774 2236 115 0 13 chr20 15694554 15694868 -50973137 + AluSq SINE Alu 1 310 -3 5717 80 26 20 chr20 15694868 15695288 -50972717 + L1PA8A LINE L1 5357 5788 -343 220 51 26 26 chr20 15695288 15695327 -50972678 + (TA)n Simple_repeat Simple_repeat 1 39 0 5717 80 26 20 chr20 15695327 15695643 -50972362 + L1PA8A LINE L1 5788 6101 -30 444 373 6 0 chr20 15695847 15696024 -50971981 - MIR3 SINE MIR -11 197 20 443 283 178 11 chr20 15696819 15697014 -50970991 + MIR SINE MIR 34 258 -4 3562 171 31 35 chr20 15699210 15699948 -50968057 + L1MB5 LINE L1 5430 6164 -10 358 227 56 71 chr20 15700119 15700317 -50967688 - L1ME4a LINE L1 -55 6066 5872 258 105 0 0 chr20 15700483 15700521 -50967484 + (GATTG)n Simple_repeat Simple_repeat 2 39 0 1981 158 16 47 chr20 15700699 15701080 -50966925 - MLT1B LTR MaLR 0 390 22 4492 125 23 91 chr20 15701087 15701957 -50966048 + Tigger1 DNA MER2_type 2 812 -1606 270 291 13 0 chr20 15702374 15702453 -50965552 + GA-rich Low_complexity Low_complexity 2 81 0 9960 136 18 9 chr20 15703054 15704656 -50963349 + Tigger1 DNA MER2_type 802 2418 0 2330 85 10 7 chr20 15704893 15705199 -50962806 + AluSg1 SINE Alu 1 307 -2 1091 179 27 31 chr20 15705549 15705773 -50962232 - AluJo SINE Alu -3 309 87 1429 167 13 80 chr20 15706366 15706477 -50961528 - AluJo SINE Alu -22 290 173 2440 67 3 0 chr20 15706477 15706776 -50961229 + AluY SINE Alu 1 300 -11 1429 167 13 80 chr20 15706776 15706975 -50961030 - AluJo SINE Alu -139 173 1 1740 169 7 16 chr20 15707260 15707568 -50960437 - AluJo SINE Alu -7 305 1 388 180 63 84 chr20 15707592 15707783 -50960222 - MLT2D LTR ERVL 0 414 150 * 460 145 13 0 chr20 15707782 15707858 -50960147 - MLT2B2 LTR ERVL -438 77 1 691 266 139 19 chr20 15708042 15708301 -50959704 - L2 LINE L2 -47 3266 2977 1634 259 26 14 chr20 15708379 15708796 -50959209 + LTR16A LTR ERVL 19 440 -10 2324 84 7 0 chr20 15709152 15709450 -50958555 + AluSc SINE Alu 1 300 -9 1870 219 28 101 chr20 15709832 15710041 -50957964 + L1M4 LINE L1 3689 3912 -2234 1479 181 14 43 chr20 15710041 15710317 -50957688 + AluJo SINE Alu 29 296 -16 1870 219 28 101 chr20 15710317 15710818 -50957187 + L1M4 LINE L1 3912 4347 -1799 260 232 0 0 chr20 15710852 15710934 -50957071 + L1M4 LINE L1 4977 5058 -1088 394 125 0 0 chr20 15710950 15711006 -50956999 + AluS SINE Alu 2 57 -246 362 312 37 0 chr20 15711019 15711128 -50956877 + MIR SINE MIR 39 151 -111 788 159 159 0 chr20 15711153 15711316 -50956689 + MER5A DNA MER1_type 1 189 0 553 187 37 0 chr20 15711591 15711698 -50956307 + MER33 DNA MER1_type 17 127 -197 1725 169 7 13 chr20 15711707 15712009 -50955996 - Tigger2 DNA MER2_type 0 2718 2419 554 200 0 0 chr20 15712009 15712119 -50955886 - L1M1 LINE L1 -4504 3061 2952 * 4948 176 62 23 chr20 15712114 15713391 -50954614 + L1MA9 LINE L1 4847 6177 -135 387 0 0 0 chr20 15713391 15713434 -50954571 + (CA)n Simple_repeat Simple_repeat 1 43 0 4948 176 62 23 chr20 15713434 15713576 -50954429 + L1MA9 LINE L1 6177 6312 0 567 114 0 11 chr20 15713829 15713917 -50954088 - AluS SINE Alu -225 87 1 454 241 167 31 chr20 15713921 15714083 -50953922 - MIR SINE MIR -74 188 5 1700 158 51 34 chr20 15714382 15714737 -50953268 + MER46B DNA MER2_type 1 236 0 220 281 151 68 chr20 15715786 15715932 -50952073 + MIR3 SINE MIR 15 172 -36 545 266 117 33 chr20 15715938 15716091 -50951914 + MIR SINE MIR 15 192 -70 2279 109 3 0 chr20 15716091 15716402 -50951603 + AluSq SINE Alu 1 312 -1 545 266 117 33 chr20 15716402 15716462 -50951543 + MIR SINE MIR 192 246 -16 542 313 17 6 chr20 15716549 15716725 -50951280 - MIR SINE MIR -24 238 61 24 53 0 0 chr20 15717383 15717421 -50950584 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr20 15718491 15718513 -50949492 + AT_rich Low_complexity Low_complexity 1 22 0 233 354 90 42 chr20 15719105 15719249 -50948756 - L2 LINE L2 -1 3271 3121 2447 43 13 7 chr20 15720668 15720971 -50947034 + AluY SINE Alu 1 305 -6 221 271 213 16 chr20 15721484 15721606 -50946399 - MER5A DNA MER1_type 0 189 44 567 312 70 26 chr20 15721710 15721957 -50946048 - MIR SINE MIR -7 255 1 487 213 118 29 chr20 15721967 15722103 -50945902 + MIR SINE MIR 114 261 -1 208 299 103 10 chr20 15722123 15722220 -50945785 - L2 LINE L2 -27 3245 3140 4196 132 27 38 chr20 15723674 15724409 -50943596 - L1PA16 LINE L1 -79 6087 5361 296 364 8 0 chr20 15724663 15724784 -50943221 + CT-rich Low_complexity Low_complexity 1 122 0 2613 58 0 0 chr20 15726439 15726748 -50941257 - AluY SINE Alu -2 309 1 21 0 0 0 chr20 15726842 15726863 -50941142 + AT_rich Low_complexity Low_complexity 1 21 0 2318 107 0 0 chr20 15727056 15727354 -50940651 - AluSx SINE Alu -14 298 1 2279 60 3 81 chr20 15729007 15729339 -50938666 - AluY SINE Alu -5 306 1 261 385 39 10 chr20 15729521 15729625 -50938380 + L2 LINE L2 3115 3221 -51 266 243 18 27 chr20 15729767 15729878 -50938127 + (TA)n Simple_repeat Simple_repeat 2 111 0 21 0 0 0 chr20 15730455 15730476 -50937529 + AT_rich Low_complexity Low_complexity 1 21 0 1834 168 34 0 chr20 15730507 15730804 -50937201 + AluJb SINE Alu 1 307 -5 15283 163 35 20 chr20 15731894 15733582 -50934423 - L1MA4A LINE L1 -11 6994 5332 2298 124 0 3 chr20 15733582 15733896 -50934109 + AluSq SINE Alu 1 313 0 15283 163 35 20 chr20 15733896 15735468 -50932537 - L1MA4A LINE L1 -1673 5332 3785 2389 168 6 56 chr20 15735468 15735804 -50932201 - L1PB4 LINE L1 -2 6154 5803 2293 107 3 3 chr20 15735804 15736113 -50931892 - AluSc SINE Alu 0 309 1 2389 168 6 56 chr20 15736113 15736203 -50931802 - L1PB4 LINE L1 -353 5803 5756 1947 104 3 63 chr20 15736203 15736520 -50931485 - AluSc SINE Alu -11 298 1 2389 168 6 56 chr20 15736520 15736609 -50931396 - L1PB4 LINE L1 -400 5756 5664 15283 163 35 20 chr20 15736609 15740193 -50927812 - L1MA4A LINE L1 -3220 3785 10 24 32 0 0 chr20 15740785 15740816 -50927189 + AT_rich Low_complexity Low_complexity 1 31 0 272 27 27 0 chr20 15740948 15740985 -50927020 + (TG)n Simple_repeat Simple_repeat 2 39 0 279 373 15 20 chr20 15741053 15741257 -50926748 + L2 LINE L2 2150 2352 -962 2231 98 3 20 chr20 15742011 15742316 -50925689 - AluSq SINE Alu -13 300 1 216 175 0 0 chr20 15742860 15742900 -50925105 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 1652 141 35 81 chr20 15742993 15743363 -50924642 - L1MC2 LINE L1 -1 6343 5991 2430 178 4 11 chr20 15743367 15743839 -50924166 + L1 LINE L1 3525 3993 -2153 2234 89 4 0 chr20 15743951 15744231 -50923774 - AluSp SINE Alu -32 281 1 465 176 386 0 chr20 15744283 15744436 -50923569 - L1MCa LINE L1 -4256 2308 2097 230 239 15 0 chr20 15744441 15744508 -50923497 - L1MCa LINE L1 -4534 2030 1963 2162 111 0 0 chr20 15744540 15744819 -50923186 - AluSg SINE Alu -31 279 1 15864 149 72 12 chr20 15744847 15746931 -50921074 - L1PBa LINE L1 -1869 4993 3035 2289 113 0 0 chr20 15746931 15747232 -50920773 - AluSx SINE Alu -11 301 1 15864 149 72 12 chr20 15747232 15749843 -50918162 - L1PBa LINE L1 -3827 3035 3 889 251 0 5 chr20 15749855 15750054 -50917951 - L1MCa LINE L1 -5228 817 620 660 276 33 6 chr20 15750057 15750238 -50917767 - L1MCa LINE L1 -5673 753 568 399 258 0 0 chr20 15750245 15750334 -50917671 - L1MCa LINE L1 -5821 605 517 338 224 0 0 chr20 15751488 15751555 -50916450 - MLT1H1 LTR MaLR 0 555 489 632 321 47 46 chr20 15751570 15751926 -50916079 + L1MC4a LINE L1 4405 4759 -1387 2195 95 3 47 chr20 15751926 15752243 -50915762 - AluSp SINE Alu -10 303 1 632 321 47 46 chr20 15752243 15752756 -50915249 + L1MC4a LINE L1 4759 5275 -871 707 192 0 0 chr20 15752829 15752975 -50915030 + L1MA6 LINE L1 6150 6295 -5 846 274 50 33 chr20 15752987 15753349 -50914656 + L1MC4a LINE L1 5816 6183 -1625 207 0 0 0 chr20 15753354 15753377 -50914628 + (T)n Simple_repeat Simple_repeat 1 23 0 485 286 136 12 chr20 15753484 15753732 -50914273 - MLT1H1 LTR MaLR -292 263 18 196 331 132 19 chr20 15753896 15754153 -50913852 - L3 LINE CR1 -183 1394 1109 1163 161 31 0 chr20 15754537 15754760 -50913245 - L1MB3 LINE L1 -7 6176 5947 23 54 0 0 chr20 15755277 15755314 -50912691 + AT_rich Low_complexity Low_complexity 1 37 0 24 53 0 0 chr20 15755490 15755528 -50912477 + AT_rich Low_complexity Low_complexity 1 38 0 1888 151 3 10 chr20 15755696 15755995 -50912010 - AluJo SINE Alu -15 297 1 4185 180 30 28 chr20 15756102 15757307 -50910698 - L1MB7 LINE L1 -19 6165 4964 188 335 156 22 chr20 15757391 15757570 -50910435 + L2 LINE L2 2888 3090 -223 342 48 0 0 chr20 15757645 15757687 -50910318 + L1PA13 LINE L1 6073 6114 -49 6293 130 14 13 chr20 15757690 15759581 -50908424 - L1PA12 LINE L1 -51 6117 4226 321 254 123 66 chr20 15759587 15759709 -50908296 + L2 LINE L2 3156 3284 -29 223 302 32 0 chr20 15760105 15760168 -50907837 - L2 LINE L2 -4 3309 3245 29 28 0 0 chr20 15760234 15760270 -50907735 + AT_rich Low_complexity Low_complexity 1 36 0 661 339 57 0 chr20 15760279 15760506 -50907499 + MIR SINE MIR 5 244 -18 5092 132 16 10 chr20 15760916 15761748 -50906257 + L1PA16 LINE L1 5322 6162 -4 207 100 0 0 chr20 15761759 15761789 -50906216 + (A)n Simple_repeat Simple_repeat 1 30 0 441 333 56 11 chr20 15762747 15762927 -50905078 + MER5A DNA MER1_type 2 189 0 651 326 27 5 chr20 15764699 15764886 -50903119 + MIR3 SINE MIR 18 208 0 234 0 0 0 chr20 15765301 15765327 -50902678 + (TA)n Simple_repeat Simple_repeat 2 27 0 2541 55 13 0 chr20 15765327 15765634 -50902371 - AluY SINE Alu 0 311 1 959 231 160 16 chr20 15766107 15766601 -50901404 - L2 LINE L2 -77 3236 2677 198 0 0 0 chr20 15766608 15766630 -50901375 + (AGGGGG)n Simple_repeat Simple_repeat 2 23 0 415 286 32 42 chr20 15767455 15767644 -50900361 - MLT1K LTR MaLR -8 580 394 942 279 133 34 chr20 15768037 15768511 -50899494 - LTR33 LTR ERVL 0 521 1 4167 110 52 54 chr20 15770057 15770813 -50897192 + LTR1 LTR ERV1 32 785 0 276 278 28 0 chr20 15771180 15771252 -50896753 - MLT1K LTR MaLR -2 586 513 2272 97 3 0 chr20 15772118 15772408 -50895597 + AluSx SINE Alu 6 296 -16 378 139 35 0 chr20 15772763 15772849 -50895156 + GA-rich Low_complexity Low_complexity 1 89 0 249 382 0 0 chr20 15773308 15773397 -50894608 + CT-rich Low_complexity Low_complexity 6 94 0 236 151 0 38 chr20 15773617 15773670 -50894335 + CT-rich Low_complexity Low_complexity 3 53 0 555 289 48 24 chr20 15774357 15774523 -50893482 - MIR SINE MIR -28 234 65 3035 68 9 20 chr20 15774742 15775180 -50892825 + L1PA13 LINE L1 5731 6163 0 373 292 74 21 chr20 15775199 15775442 -50892563 - L1ME LINE L1 -457 5664 5409 2230 100 3 0 chr20 15776190 15776480 -50891525 + AluSg1 SINE Alu 4 294 -15 21 71 0 0 chr20 15776553 15776595 -50891410 + AT_rich Low_complexity Low_complexity 1 42 0 1915 126 8 0 chr20 15777426 15777689 -50890316 + AluSq SINE Alu 33 297 -16 6165 220 170 10 chr20 15777710 15779489 -50888516 - L1M2 LINE L1 -4784 2065 1 275 367 17 8 chr20 15779770 15779886 -50888119 - MER117 DNA MER1_type -32 165 49 2482 164 15 18 chr20 15779886 15780353 -50887652 - MER61D LTR ERV1 0 501 1 489 343 34 5 chr20 15780449 15780656 -50887349 - L3 LINE CR1 -996 581 369 844 218 99 15 chr20 15780671 15780873 -50887132 + MER20 DNA MER1_type 1 219 0 638 281 0 0 chr20 15780894 15781033 -50886972 + MER5A DNA MER1_type 48 186 -3 200 364 0 0 chr20 15781061 15781127 -50886878 - L2 LINE L2 -7 3306 3241 242 259 138 26 chr20 15781293 15781409 -50886596 + L3 LINE CR1 646 774 -803 2187 73 28 17 chr20 15781739 15782027 -50885978 - AluSc SINE Alu -18 291 1 270 252 36 36 chr20 15782440 15782551 -50885454 + ERVL LTR ERVL 5235 5345 -419 980 237 140 20 chr20 15784133 15784491 -50883514 - MLT1J1 LTR MaLR -2 444 44 516 285 58 0 chr20 15785802 15785939 -50882066 + MIR SINE MIR 8 152 -110 781 234 52 75 chr20 15785947 15786126 -50881879 + MER46C DNA MER2_type 39 210 -128 998 266 92 56 chr20 15786126 15786627 -50881378 + LTR33 LTR ERVL 3 521 0 781 234 52 75 chr20 15786627 15786754 -50881251 + MER46C DNA MER2_type 210 338 0 238 319 157 19 chr20 15787223 15787433 -50880572 + MIR SINE MIR 14 252 -10 225 0 0 0 chr20 15787989 15788014 -50879991 + (A)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr20 15788364 15788393 -50879612 + AT_rich Low_complexity Low_complexity 1 29 0 405 274 0 102 chr20 15788894 15789071 -50878934 - L1ME LINE L1 -5853 217 59 2359 138 0 0 chr20 15789234 15789604 -50878401 - L1PB1 LINE L1 0 6867 6498 182 167 28 28 chr20 15789613 15789685 -50878320 + (TA)n Simple_repeat Simple_repeat 2 73 0 362 179 34 67 chr20 15789734 15789913 -50878092 + (TTATA)n Simple_repeat Simple_repeat 5 177 0 396 0 0 0 chr20 15789965 15790009 -50877996 + (CA)n Simple_repeat Simple_repeat 2 45 0 9996 199 71 9 chr20 15790009 15795668 -50872337 - L1PB1 LINE L1 -369 6498 6 230 282 233 0 chr20 15795856 15795959 -50872046 + MIR SINE MIR 26 152 -110 4993 159 23 17 chr20 15796024 15797267 -50870738 + L1PB4 LINE L1 4905 6149 -7 267 31 0 0 chr20 15797441 15797473 -50870532 + (A)n Simple_repeat Simple_repeat 1 32 0 1389 147 9 0 chr20 15797686 15797897 -50870108 + 7SLRNA srpRNA srpRNA 22 234 -86 2318 82 27 0 chr20 15798131 15798425 -50869580 - AluSg SINE Alu -8 302 1 2102 163 64 8 chr20 15798447 15798839 -50869166 - MLT2D LTR ERVL 0 414 1 4566 116 103 100 chr20 15800931 15802324 -50865681 + pTR5 LTR ERV1 726 2437 -1 469 245 129 13 chr20 15802407 15802562 -50865443 - L1MC4 LINE L1 -298 7744 7572 399 81 0 0 chr20 15802569 15802631 -50865374 - L1MC2 LINE L1 -1 6343 6282 683 197 34 77 chr20 15802631 15802800 -50865205 + L1MC4 LINE L1 7744 7902 -140 198 0 0 0 chr20 15802800 15802822 -50865183 + (GA)n Simple_repeat Simple_repeat 2 23 0 683 197 34 77 chr20 15802822 15802886 -50865119 + L1MC4 LINE L1 7902 7967 -75 1453 78 11 0 chr20 15802960 15803151 -50864854 - AluY SINE Alu -7 304 112 258 270 40 38 chr20 15803158 15803325 -50864680 + L1ME LINE L1 5713 5825 -296 1735 140 68 14 chr20 15803353 15803645 -50864360 + AluSx SINE Alu 1 308 -4 2836 181 45 8 chr20 15803716 15804486 -50863519 + L1MC2 LINE L1 5007 5801 -543 14004 134 33 38 chr20 15804486 15805766 -50862239 - Tigger1 DNA MER2_type 0 2418 1154 7526 27 9 3 chr20 15805766 15806860 -50861145 - L1PA4 LINE L1 0 6155 5060 14004 134 33 38 chr20 15806860 15808009 -50859996 - Tigger1 DNA MER2_type -1264 1154 1 2473 63 0 16 chr20 15808038 15808354 -50859651 + AluY SINE Alu 1 311 0 2603 144 40 12 chr20 15808354 15808848 -50859157 + L1MC2 LINE L1 5817 6324 -20 503 266 29 7 chr20 15809986 15810125 -50857880 - MIR SINE MIR -115 147 6 23 0 0 0 chr20 15811230 15811253 -50856752 + AT_rich Low_complexity Low_complexity 1 23 0 448 269 38 68 chr20 15811601 15811865 -50856140 - HAL1 LINE L1 -856 1651 1396 478 271 51 86 chr20 15811910 15812165 -50855840 - L1MEd LINE L1 -4886 1233 988 5309 37 0 3 chr20 15812169 15812812 -50855193 - L1PA4 LINE L1 0 6155 5515 6867 179 22 16 chr20 15812812 15813376 -50854629 + L1PA15 LINE L1 3776 4335 -1830 2434 92 0 0 chr20 15813376 15813682 -50854323 + AluSg SINE Alu 3 308 -2 6867 179 22 16 chr20 15813682 15815474 -50852531 + L1PA15 LINE L1 4335 6152 -13 2105 101 47 0 chr20 15815476 15815754 -50852251 + AluSg SINE Alu 1 291 -19 233 143 0 20 chr20 15816149 15816198 -50851807 + (TA)n Simple_repeat Simple_repeat 1 48 0 233 345 18 67 chr20 15816247 15816412 -50851593 - L2 LINE L2 -181 3091 2935 21 36 0 0 chr20 15817174 15817202 -50850803 + AT_rich Low_complexity Low_complexity 1 28 0 543 280 64 24 chr20 15818662 15818912 -50849093 - MIR SINE MIR -1 261 2 2467 67 3 0 chr20 15819710 15820008 -50847997 + AluY SINE Alu 1 299 -12 501 277 25 12 chr20 15820035 15820218 -50847787 - MIR SINE MIR -63 145 9 27 0 0 0 chr20 15821774 15821801 -50846204 + AT_rich Low_complexity Low_complexity 1 27 0 628 146 0 0 chr20 15822178 15822267 -50845738 + Tigger4(Zombi) DNA MER2_type 1 89 -2642 5452 110 22 26 chr20 15822271 15822931 -50845074 + Tigger4(Zombi) DNA MER2_type 1875 2534 -197 2094 103 11 0 chr20 15822931 15823232 -50844773 + AluSx SINE Alu 1 304 0 5452 110 22 26 chr20 15823232 15823428 -50844577 + Tigger4(Zombi) DNA MER2_type 2534 2729 -2 198 0 0 0 chr20 15823756 15823778 -50844227 + (T)n Simple_repeat Simple_repeat 1 22 0 239 133 22 0 chr20 15825365 15825410 -50842595 + (TAA)n Simple_repeat Simple_repeat 1 46 0 665 247 25 0 chr20 15827138 15827296 -50840709 + L2 LINE L2 3152 3313 0 25 0 0 0 chr20 15829098 15829123 -50838882 + AT_rich Low_complexity Low_complexity 1 25 0 3534 30 12 0 chr20 15829372 15829798 -50838207 - L1P LINE L1 -3998 2148 1718 799 21 0 0 chr20 15829793 15829888 -50838117 + L1P LINE L1 2132 2226 -3920 * 3460 33 0 5 chr20 15829890 15830353 -50837652 + L1PA4 LINE L1 5721 6181 0 667 298 110 56 chr20 15830357 15831169 -50836836 - L1MEd LINE L1 -4831 1479 595 21 0 0 0 chr20 15832294 15832315 -50835690 + AT_rich Low_complexity Low_complexity 1 21 0 5792 103 18 0 chr20 15832368 15833550 -50834455 - L1PB1 LINE L1 0 6151 4941 2062 114 0 0 chr20 15833576 15833848 -50834157 - AluSg SINE Alu -18 292 21 21 36 0 0 chr20 15833982 15834010 -50833995 + AT_rich Low_complexity Low_complexity 1 28 0 455 329 57 0 chr20 15834203 15834343 -50833662 - L2 LINE L2 -7 3265 3118 864 200 0 12 chr20 15835069 15835229 -50832776 - FRAM SINE Alu -18 158 1 560 286 122 14 chr20 15835251 15835464 -50832541 + MIR SINE MIR 2 237 -25 402 324 54 31 chr20 15836424 15836646 -50831359 + MLT1K LTR MaLR 202 428 -160 390 328 185 28 chr20 15836888 15837803 -50830202 - L2 LINE L2 -785 2529 1472 575 254 113 19 chr20 15837808 15838021 -50829984 - LTR33A LTR ERVL -2 521 289 1623 164 0 38 chr20 15838306 15838598 -50829407 + AluJb SINE Alu 1 281 -31 500 0 17 0 chr20 15838600 15838660 -50829345 + (CA)n Simple_repeat Simple_repeat 2 62 0 2498 67 0 0 chr20 15840404 15840703 -50827302 - AluY SINE Alu -12 299 1 421 311 20 13 chr20 15840813 15840964 -50827041 + MIR3 SINE MIR 55 206 -2 180 125 0 0 chr20 15841386 15841418 -50826587 + (TATATG)n Simple_repeat Simple_repeat 5 36 0 240 162 0 0 chr20 15842185 15842222 -50825783 + MER94 DNA DNA 1 37 -97 358 272 121 39 chr20 15842650 15842988 -50825017 - L1MC5 LINE L1 -44 7917 7552 252 234 22 66 chr20 15843069 15843206 -50824799 - L1MC5 LINE L1 -570 7391 7261 21 0 0 0 chr20 15844738 15844759 -50823246 + AT_rich Low_complexity Low_complexity 1 21 0 202 333 0 0 chr20 15844825 15844885 -50823120 + (TA)n Simple_repeat Simple_repeat 1 60 0 2066 130 3 0 chr20 15844939 15845231 -50822774 + AluSc SINE Alu 3 295 -14 233 248 38 48 chr20 15845234 15845339 -50822666 - L3 LINE CR1 -321 1256 1153 634 37 0 12 chr20 15845339 15845420 -50822585 + L1PA3 LINE L1 2 81 -6065 41779 35 5 2 chr20 15845420 15851278 -50816727 + L1PA3 LINE L1 293 6165 0 205 297 103 122 chr20 15851278 15851598 -50816407 - L3 LINE CR1 -416 1161 848 596 187 86 36 chr20 15851661 15851800 -50816205 + AluSg SINE Alu 1 146 -164 2091 91 24 7 chr20 15851800 15852087 -50815918 + AluSc SINE Alu 6 297 -12 224 196 18 18 chr20 15852266 15852322 -50815683 - L2 LINE L2 0 3313 3258 192 40 0 0 chr20 15852333 15852358 -50815647 + (GA)n Simple_repeat Simple_repeat 2 26 0 21 36 0 0 chr20 15853464 15853492 -50814513 + AT_rich Low_complexity Low_complexity 1 28 0 316 305 19 19 chr20 15854196 15854301 -50813704 - MIR SINE MIR -122 140 36 308 236 149 0 chr20 15855558 15855706 -50812299 - Charlie1 DNA MER1_type 0 2761 2592 2542 161 32 0 chr20 15855711 15856176 -50811829 + L1MB7 LINE L1 5647 6126 -58 329 111 0 0 chr20 15856212 15856266 -50811739 + L1MB7 LINE L1 6112 6165 -19 2339 94 3 0 chr20 15856282 15856590 -50811415 + AluSg SINE Alu 1 309 -1 1345 215 37 6 chr20 15856591 15856945 -50811060 - Charlie1 DNA MER1_type -164 2597 2233 384 246 95 77 chr20 15856957 15857179 -50810826 - MLT1H1 LTR MaLR -149 446 156 2137 156 82 10 chr20 15857186 15857577 -50810428 - MSTA LTR MaLR 0 428 10 561 263 45 0 chr20 15857588 15857721 -50810284 - MLT1H1 LTR MaLR -400 155 17 1001 113 0 0 chr20 15858294 15858427 -50809578 - AluSq/x SINE Alu -180 133 1 1868 136 51 26 chr20 15859746 15860098 -50807907 - MER46B DNA MER2_type 0 236 1 369 43 0 0 chr20 15862011 15862058 -50805947 + (ATG)n Simple_repeat Simple_repeat 2 48 0 2407 236 33 25 chr20 15862166 15862735 -50805270 - MLT1E LTR MaLR -5 588 15 566 239 13 65 chr20 15862778 15862933 -50805072 + MLT1J LTR MaLR 7 153 -358 * 595 224 36 42 chr20 15862928 15863093 -50804912 + MLT1J LTR MaLR 324 487 -24 1790 165 3 10 chr20 15864165 15864468 -50803537 - AluJo SINE Alu -11 301 1 566 215 22 7 chr20 15864777 15864912 -50803093 + L1PA14 LINE L1 6023 6159 -2 2308 100 3 0 chr20 15865135 15865436 -50802569 - AluSp SINE Alu -11 302 1 1365 228 87 65 chr20 15866478 15866882 -50801123 - LTR16A1 LTR ERVL 0 457 41 946 196 41 45 chr20 15866882 15867102 -50800903 + MER20 DNA MER1_type 1 219 0 1365 228 87 65 chr20 15867102 15867144 -50800861 - LTR16A1 LTR ERVL -416 41 1 201 50 0 125 chr20 15867241 15867260 -50800745 + (TTCA)n Simple_repeat Simple_repeat 1 15 -20 2216 99 0 0 chr20 15867260 15867562 -50800443 - AluSq SINE Alu 0 302 1 201 50 0 125 chr20 15867562 15867581 -50800424 + (TTCA)n Simple_repeat Simple_repeat 15 35 0 356 258 140 0 chr20 15867589 15867682 -50800323 - L2 LINE L2 -9 3263 3158 1236 272 109 28 chr20 15867786 15868331 -50799674 - L2 LINE L2 -2 3311 2730 262 267 0 0 chr20 15868833 15868893 -50799112 + (TG)n Simple_repeat Simple_repeat 2 61 0 428 220 120 13 chr20 15869615 15869765 -50798240 - L1MC5 LINE L1 -95 7866 7701 207 306 28 0 chr20 15870268 15870340 -50797665 - L2 LINE L2 0 3313 3240 1374 251 26 13 chr20 15870839 15871230 -50796775 + L1ME3A LINE L1 5556 5951 -219 14321 137 30 9 chr20 15871451 15872913 -50795092 + Tigger1 DNA MER2_type 5 1534 -884 2434 90 0 0 chr20 15872913 15873214 -50794791 + AluSq SINE Alu 1 301 -12 14321 137 30 9 chr20 15873214 15874071 -50793934 + Tigger1 DNA MER2_type 1534 2372 -46 1135 98 0 6 chr20 15874069 15874232 -50793773 + Tigger1 DNA MER2_type 1790 1951 -467 * 337 93 0 0 chr20 15874235 15874278 -50793727 + Tigger1 DNA MER2_type 2376 2418 0 379 293 106 0 chr20 15874855 15874978 -50793027 - MIR SINE MIR -20 242 107 189 74 0 0 chr20 15875085 15875112 -50792893 + (TTG)n Simple_repeat Simple_repeat 2 28 0 767 292 19 4 chr20 15875592 15875849 -50792156 - MIR SINE MIR 0 262 2 1821 190 110 3 chr20 15876648 15877021 -50790984 - MLT1E2 LTR MaLR -1 625 213 325 202 214 24 chr20 15877007 15877091 -50790914 - MLT1E2 LTR MaLR -554 100 1 * 2089 113 13 3 chr20 15877278 15877579 -50790426 - AluSg SINE Alu -6 304 1 424 296 70 38 chr20 15878780 15878966 -50789039 - L3 LINE CR1 -385 1192 1001 289 308 9 19 chr20 15879036 15879143 -50788862 - L3 LINE CR1 -572 1005 900 202 135 27 0 chr20 15879374 15879411 -50788594 + T-rich Low_complexity Low_complexity 2 39 0 585 284 53 62 chr20 15879500 15879582 -50788423 + L2 LINE L2 2898 2979 -334 775 188 23 23 chr20 15879582 15879758 -50788247 + MER5B DNA MER1_type 2 177 -1 585 284 53 62 chr20 15879758 15879995 -50788010 + L2 LINE L2 2979 3214 -99 248 277 201 38 chr20 15880541 15880909 -50787096 + L2 LINE L2 1630 2057 -1257 511 313 106 8 chr20 15880922 15881168 -50786837 - L3 LINE CR1 -886 691 422 315 0 0 0 chr20 15881640 15881675 -50786330 + (CA)n Simple_repeat Simple_repeat 2 36 0 21 71 0 0 chr20 15883775 15883817 -50784188 + AT_rich Low_complexity Low_complexity 1 42 0 6911 115 69 9 chr20 15884976 15886137 -50781868 + Tigger3b DNA MER2_type 1 1231 0 2176 107 3 0 chr20 15886147 15886445 -50781560 - AluSx SINE Alu -13 299 1 239 227 30 82 chr20 15886765 15886874 -50781131 + MER5A DNA MER1_type 1 114 -75 326 335 12 4 chr20 15887105 15887286 -50780719 - MIR SINE MIR -13 249 2 454 314 124 38 chr20 15887316 15887526 -50780479 - MIR SINE MIR -31 231 4 2149 96 3 0 chr20 15889106 15889424 -50778581 + AluSp SINE Alu 1 319 0 456 306 102 11 chr20 15889465 15889651 -50778354 - MIR SINE MIR -49 213 11 347 299 69 21 chr20 15889749 15889896 -50778109 + MIR SINE MIR 3 149 -59 505 280 32 59 chr20 15890039 15890225 -50777780 - L2 LINE L2 0 3313 3133 1628 114 13 0 chr20 15891085 15891312 -50776693 - MER30 DNA MER1_type 0 230 1 189 250 24 71 chr20 15891419 15891503 -50776502 + L2 LINE L2 2637 2716 -598 326 332 152 41 chr20 15891652 15891969 -50776036 + L2 LINE L2 2825 3206 -107 2216 78 17 17 chr20 15891969 15892264 -50775741 + AluSc SINE Alu 5 299 -10 326 332 152 41 chr20 15892264 15892386 -50775619 + L2 LINE L2 3206 3313 0 452 271 66 13 chr20 15892388 15892539 -50775466 + MIR SINE MIR 96 254 -8 215 312 137 39 chr20 15894140 15894528 -50773477 + L2 LINE L2 1774 2199 -1115 321 215 127 0 chr20 15894652 15894731 -50773274 + MER94 DNA DNA 14 102 -32 217 361 138 4 chr20 15894771 15895031 -50772974 + L2 LINE L2 2371 2665 -649 23 0 0 0 chr20 15895040 15895063 -50772942 + AT_rich Low_complexity Low_complexity 1 23 0 207 220 70 180 chr20 15895255 15895455 -50772550 + MER5B DNA MER1_type 1 178 0 2304 106 0 0 chr20 15895710 15896003 -50772002 + AluSx SINE Alu 1 293 -19 234 0 0 0 chr20 15896803 15896829 -50771176 + (TA)n Simple_repeat Simple_repeat 2 27 0 398 255 129 0 chr20 15897457 15897597 -50770408 - MIR SINE MIR -57 151 32 3826 194 83 14 chr20 15897599 15898404 -50769601 - MER21B LTR ERV1 -2 861 1 22 0 0 0 chr20 15899699 15899721 -50768284 + AT_rich Low_complexity Low_complexity 1 22 0 203 241 17 35 chr20 15908323 15908381 -50759624 - L2 LINE L2 -9 3304 3248 31 68 0 0 chr20 15910940 15910999 -50757006 + AT_rich Low_complexity Low_complexity 1 59 0 1733 93 141 0 chr20 15912747 15912995 -50755010 + AluSp SINE Alu 1 283 -30 22 56 0 0 chr20 15913214 15913250 -50754755 + AT_rich Low_complexity Low_complexity 1 36 0 28 0 0 0 chr20 15914042 15914070 -50753935 + AT_rich Low_complexity Low_complexity 1 28 0 263 244 85 56 chr20 15914858 15915026 -50752979 + MIR SINE MIR 2 262 0 238 82 61 0 chr20 15915728 15915777 -50752228 + (TTCA)n Simple_repeat Simple_repeat 4 55 0 219 250 19 0 chr20 15915819 15915871 -50752134 + L3 LINE CR1 1525 1577 0 2231 106 3 3 chr20 15915987 15916288 -50751717 + AluSq SINE Alu 5 305 -8 799 294 69 71 chr20 15916326 15916888 -50751117 - MLT1K LTR MaLR -2 586 26 255 322 44 11 chr20 15917949 15918039 -50749966 + MIR SINE MIR 75 167 -95 180 111 0 0 chr20 15919883 15919910 -50748095 + (TTA)n Simple_repeat Simple_repeat 2 28 0 261 159 0 0 chr20 15920139 15920183 -50747822 - AluSx SINE Alu -7 294 251 1221 132 6 0 chr20 15920183 15920357 -50747648 - AluSx SINE Alu -137 175 1 2027 89 59 36 chr20 15920447 15920751 -50747254 + AluY SINE Alu 1 311 0 2230 110 3 25 chr20 15922607 15922926 -50745079 + AluSx SINE Alu 1 312 0 1726 183 0 0 chr20 15923444 15923723 -50744282 + AluJb SINE Alu 32 310 -2 1356 126 90 12 chr20 15923886 15924141 -50743864 - L1MA2 LINE L1 0 6304 6030 36 23 0 0 chr20 15924160 15924203 -50743802 + AT_rich Low_complexity Low_complexity 1 43 0 1491 135 0 17 chr20 15924203 15924440 -50743565 - L1MA2 LINE L1 -258 6046 5814 1583 75 5 5 chr20 15924477 15924676 -50743329 - AluSx SINE Alu -113 199 1 8920 144 17 20 chr20 15924676 15926833 -50741172 - L1MA2 LINE L1 -476 5828 3675 782 78 0 0 chr20 15926949 15927051 -50740954 + U6 snRNA snRNA 4 105 -2 301 266 31 8 chr20 15927075 15927203 -50740802 - L1ME LINE L1 -436 5685 5555 546 280 36 0 chr20 15927658 15927826 -50740179 - MLT1J LTR MaLR -4 507 334 415 264 35 14 chr20 15928001 15928145 -50739860 - L1ME LINE L1 -452 5718 5572 525 261 22 22 chr20 15928154 15928292 -50739713 - MLT1L LTR MaLR -4 611 474 392 300 139 48 chr20 15928352 15928625 -50739380 - MLT1L LTR MaLR -313 302 5 292 302 9 20 chr20 15928759 15928976 -50739029 - L1ME LINE L1 -747 5399 5187 371 243 0 0 chr20 15929140 15929210 -50738795 + Charlie1 DNA MER1_type 46 115 -2646 3549 108 58 45 chr20 15929232 15929855 -50738150 - L1PA16 LINE L1 -7 6159 5529 226 272 158 9 chr20 15929966 15930080 -50737925 + L1ME LINE L1 5539 5669 -452 267 159 130 0 chr20 15930301 15930370 -50737635 + L1ME4a LINE L1 5962 6039 -82 606 348 8 25 chr20 15930679 15930923 -50737082 + MIR SINE MIR 7 246 -16 1544 266 80 35 chr20 15930967 15931122 -50736883 - MLT1G1 LTR MaLR -5 590 443 2318 113 0 0 chr20 15931122 15931432 -50736573 - AluSx SINE Alu -2 310 1 1544 266 80 35 chr20 15931432 15931839 -50736166 - MLT1G1 LTR MaLR -152 443 3 499 236 103 56 chr20 15932974 15933077 -50734928 - MIR SINE MIR -13 249 152 2315 83 0 3 chr20 15933077 15933377 -50734628 - AluSc SINE Alu -4 305 7 499 236 103 56 chr20 15933377 15933468 -50734537 - MIR SINE MIR -110 152 46 1843 161 0 3 chr20 15933532 15933845 -50734160 + AluJo SINE Alu 1 312 0 4617 127 19 37 chr20 15933912 15934218 -50733787 + L1MA8 LINE L1 5461 5771 -520 1683 167 39 0 chr20 15934218 15934499 -50733506 + AluJb SINE Alu 1 292 -20 4617 127 19 37 chr20 15934499 15935021 -50732984 + L1MA8 LINE L1 5771 6274 -17 192 311 16 0 chr20 15935451 15935512 -50732493 + MIR SINE MIR 201 262 0 233 290 97 0 chr20 15935740 15935833 -50732172 + MER117 DNA MER1_type 24 125 -72 526 270 132 0 chr20 15936825 15936984 -50731021 - MIR SINE MIR -25 237 58 1010 154 67 5 chr20 15937450 15937645 -50730360 + MER63 DNA MER1_type 840 1046 -14 271 336 48 16 chr20 15937729 15937854 -50730151 + MIR SINE MIR 28 156 -106 393 293 93 13 chr20 15937905 15938055 -50729950 - MIR SINE MIR -99 163 2 2527 39 13 3 chr20 15938166 15938474 -50729531 + AluY SINE Alu 1 311 0 593 219 6 61 chr20 15938545 15938709 -50729296 + MER5B DNA MER1_type 2 156 -22 1998 205 16 38 chr20 15939058 15939506 -50728499 - L1MB5 LINE L1 -1 6671 6234 * 3685 242 70 68 chr20 15939478 15940999 -50727006 - L1MB5 LINE L1 -2370 4274 2758 2120 116 3 0 chr20 15940999 15941292 -50726713 - AluSc SINE Alu -15 294 1 3685 242 70 68 chr20 15941292 15942898 -50725107 - L1MB5 LINE L1 -3886 2758 1076 2132 92 32 0 chr20 15942898 15943180 -50724825 + AluY SINE Alu 1 291 -20 3685 242 70 68 chr20 15943180 15944258 -50723747 - L1MB5 LINE L1 -5568 1076 2 22 0 0 0 chr20 15945539 15945561 -50722444 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr20 15945628 15945668 -50722337 + AT_rich Low_complexity Low_complexity 1 40 0 1697 185 3 19 chr20 15945831 15946139 -50721866 + AluJo SINE Alu 2 304 -8 21 36 0 0 chr20 15946206 15946234 -50721771 + AT_rich Low_complexity Low_complexity 1 28 0 213 39 0 0 chr20 15946438 15946464 -50721541 + (TTTTC)n Simple_repeat Simple_repeat 2 27 0 282 312 71 68 chr20 15946482 15946793 -50721212 + L2 LINE L2 2999 3310 -3 225 227 0 61 chr20 15946910 15946976 -50721029 + L1P LINE L1 3717 3778 -2368 23 0 0 0 chr20 15949881 15949904 -50718101 + AT_rich Low_complexity Low_complexity 1 23 0 258 194 43 97 chr20 15950970 15951063 -50716942 + MER5B DNA MER1_type 2 89 -89 1832 149 3 11 chr20 15951097 15951427 -50716578 + AluJo SINE Alu 5 332 0 584 316 48 5 chr20 15951440 15951649 -50716356 + MIR SINE MIR 31 248 -14 358 256 42 48 chr20 15951670 15951838 -50716167 + MIR SINE MIR 70 236 -26 886 211 22 11 chr20 15952673 15952858 -50715147 - MER5A DNA MER1_type -1 188 2 782 294 173 18 chr20 15952873 15953203 -50714802 + LTR16A LTR ERVL 14 394 -56 816 260 48 8 chr20 15953663 15953913 -50714092 - MIR SINE MIR 0 262 3 481 138 0 0 chr20 15953970 15954050 -50713955 - L1MB8 LINE L1 -1 6177 6098 4645 186 47 10 chr20 15954075 15955521 -50712484 - L1MB4 LINE L1 -12 6168 4663 579 287 23 43 chr20 15955755 15956013 -50711992 + MER46C DNA MER2_type 86 338 0 2313 78 3 0 chr20 15956688 15956983 -50711022 - AluY SINE Alu -11 300 5 2227 80 3 0 chr20 15957014 15957302 -50710703 + AluSp SINE Alu 1 289 -24 225 0 0 0 chr20 15957305 15957330 -50710675 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 376 305 86 40 chr20 15960656 15960830 -50707175 - MIR SINE MIR -14 248 67 2150 192 19 10 chr20 15961014 15961218 -50706787 + MSTB LTR MaLR 3 204 -222 186 43 0 0 chr20 15961218 15961241 -50706764 + (TC)n Simple_repeat Simple_repeat 2 24 0 2150 192 19 10 chr20 15961241 15961452 -50706553 + MSTB LTR MaLR 204 422 -4 1561 251 102 43 chr20 15961648 15962552 -50705453 - L1M4c LINE L1 -5254 1026 31 2293 88 0 10 chr20 15962642 15962939 -50705066 - AluY SINE Alu -17 294 1 1131 177 74 12 chr20 15962977 15963220 -50704785 - Tigger2 DNA MER2_type 0 2718 2461 1143 165 20 10 chr20 15963287 15963487 -50704518 - Tigger2 DNA MER2_type -1975 743 542 2193 109 0 7 chr20 15963505 15963807 -50704198 - AluSx SINE Alu -12 300 1 1578 109 4 4 chr20 15963839 15964069 -50703936 + AluSg/x SINE Alu 71 300 -10 274 194 15 30 chr20 15964069 15964127 -50703878 - AluJ/FRAM SINE Alu -20 282 224 * 1153 220 116 0 chr20 15964116 15964366 -50703639 - Tigger2 DNA MER2_type -2175 543 265 5704 159 14 3 chr20 15964373 15965393 -50702612 + L1PA13 LINE L1 3983 5013 -1133 * 5800 120 10 3 chr20 15965379 15966262 -50701743 + L1PA13 LINE L1 5271 6159 -4 2219 103 6 3 chr20 15966291 15966610 -50701395 + L1PA16 LINE L1 5837 6156 -10 259 181 28 0 chr20 15966875 15966947 -50701058 + CT-rich Low_complexity Low_complexity 3 76 0 1759 202 27 25 chr20 15968362 15968728 -50699277 + MLT1A2 LTR MaLR 1 367 -7 7431 224 57 44 chr20 15968794 15970550 -50697455 - L1MDa LINE L1 -1548 4667 2935 670 225 0 0 chr20 15970550 15970679 -50697326 - FLAM_A SINE Alu -2 131 3 7431 224 57 44 chr20 15970679 15971271 -50696734 - L1MDa LINE L1 -3280 2935 2352 2400 74 0 0 chr20 15971271 15971568 -50696437 + AluY SINE Alu 1 297 -14 7431 224 57 44 chr20 15971568 15971617 -50696388 - L1MDa LINE L1 -3863 2352 2305 2240 102 0 7 chr20 15971617 15971920 -50696085 - AluSg SINE Alu -9 301 1 7431 224 57 44 chr20 15971920 15972229 -50695776 - L1MDa LINE L1 -3910 2305 1850 5311 136 38 48 chr20 15972233 15973376 -50694629 - L1MA5 LINE L1 0 6300 5170 548 244 105 6 chr20 15973352 15973524 -50694481 - L1MDa LINE L1 -4505 1891 1703 * 237 284 49 0 chr20 15973559 15973640 -50694365 - L1MDa LINE L1 -4677 1719 1635 1772 139 0 4 chr20 15973649 15973915 -50694090 - AluSx SINE Alu -14 298 34 2598 269 50 20 chr20 15973936 15975485 -50692520 - L1MDa LINE L1 -4747 1649 23 1401 100 0 0 chr20 15975839 15976029 -50691976 - L1P4 LINE L1 -425 5743 5554 285 172 0 0 chr20 15977125 15977189 -50690816 + (TG)n Simple_repeat Simple_repeat 1 64 0 765 280 154 23 chr20 15978316 15978927 -50689078 + L1MEd LINE L1 520 1210 -4909 1281 180 123 11 chr20 15978975 15979236 -50688769 + AluSx SINE Alu 4 293 -19 444 293 200 5 chr20 15979478 15979693 -50688312 + L1MEd LINE L1 2115 2371 -3758 286 292 36 66 chr20 15981235 15981372 -50686633 + L2 LINE L2 3179 3311 -2 752 236 80 42 chr20 15982585 15982822 -50685183 + MIR SINE MIR 1 246 -16 209 324 81 0 chr20 15983781 15983855 -50684150 + L2 LINE L2 3184 3263 -9 531 289 93 18 chr20 15983955 15984045 -50683960 - MIR SINE MIR -9 253 171 185 65 32 0 chr20 15984045 15984076 -50683929 + (TTA)n Simple_repeat Simple_repeat 2 33 0 531 289 93 18 chr20 15984076 15984210 -50683795 - MIR SINE MIR -91 171 12 429 306 45 38 chr20 15984598 15984755 -50683250 + LTR16C LTR ERVL 81 238 -253 264 324 176 14 chr20 15984764 15984850 -50683155 - MER5A DNA MER1_type -9 180 109 1963 155 19 30 chr20 15984850 15985218 -50682787 - L1PA16 LINE L1 0 6166 5803 264 324 176 14 chr20 15985218 15985279 -50682726 - MER5A DNA MER1_type -80 109 9 624 309 36 32 chr20 15985286 15985538 -50682467 + LTR16C LTR ERVL 236 488 -3 370 289 29 10 chr20 15986376 15986480 -50681525 + MER91C DNA MER1_type 1 106 -34 423 289 35 0 chr20 15987270 15987384 -50680621 + MIR SINE MIR 120 237 -25 324 306 0 0 chr20 15987752 15987824 -50680181 - MIR SINE MIR -180 82 11 216 255 20 20 chr20 15987841 15987939 -50680066 + (TA)n Simple_repeat Simple_repeat 1 98 0 1936 240 103 65 chr20 15988646 15989761 -50678244 + L2 LINE L2 2153 3313 0 2314 90 0 0 chr20 15990590 15990880 -50677125 - AluSc SINE Alu -15 294 5 272 137 0 59 chr20 15991295 15991346 -50676659 - L2 LINE L2 -1 3312 3265 679 11 23 0 chr20 15991650 15991738 -50676267 + (TCTA)n Simple_repeat Simple_repeat 2 91 0 314 268 0 0 chr20 15993068 15993139 -50674866 - MIR3 SINE MIR -10 198 128 2333 94 3 0 chr20 15993672 15993981 -50674024 - AluSp SINE Alu -3 310 1 24 67 0 0 chr20 15994232 15994277 -50673728 + AT_rich Low_complexity Low_complexity 1 45 0 580 234 129 24 chr20 15994449 15994697 -50673308 - L1ME4a LINE L1 -237 5884 5611 21 0 0 0 chr20 15994768 15994789 -50673216 + AT_rich Low_complexity Low_complexity 1 21 0 400 128 0 9 chr20 15994795 15994872 -50673133 + L1M4 LINE L1 5577 5649 -519 1745 183 0 45 chr20 15994878 15995326 -50672679 - L1M3 LINE L1 -562 6116 5691 1867 146 7 14 chr20 15995326 15995620 -50672385 - AluJo SINE Alu -20 292 1 1745 183 0 45 chr20 15995620 15995686 -50672319 - L1M3 LINE L1 -987 5691 5624 1795 234 17 19 chr20 15995686 15996164 -50671841 - L1M3 LINE L1 -2339 4305 3829 2352 224 46 19 chr20 15996192 15997606 -50670399 - L1M3 LINE L1 -3158 3486 1940 275 272 52 99 chr20 15997795 15998008 -50669997 - L1M3 LINE L1 -6293 249 47 2382 66 0 3 chr20 15998045 15998346 -50669659 + AluY SINE Alu 1 300 -11 2438 72 3 0 chr20 15998383 15998689 -50669316 - AluSp SINE Alu -6 307 1 27 49 0 0 chr20 15998857 15998898 -50669107 + AT_rich Low_complexity Low_complexity 1 41 0 387 290 37 43 chr20 15999194 15999356 -50668649 + MER117 DNA MER1_type 33 193 -4 3268 278 146 35 chr20 15999745 16001707 -50666298 - HAL1 LINE L1 -89 2418 239 341 199 53 20 chr20 16002078 16002229 -50665776 + (TA)n Simple_repeat Simple_repeat 2 157 0 929 279 52 47 chr20 16004286 16004691 -50663314 + LTR16C LTR ERVL 84 490 -1 366 357 106 38 chr20 16004812 16005239 -50662766 - L2 LINE L2 -498 2816 2349 899 234 122 68 chr20 16005239 16005721 -50662284 + MLT1J LTR MaLR 1 508 -3 366 357 106 38 chr20 16005721 16005794 -50662211 - L2 LINE L2 -965 2349 2282 321 309 73 9 chr20 16005874 16005984 -50662021 - MIR SINE MIR -141 121 5 317 338 45 25 chr20 16006303 16006460 -50661545 - MIR3 SINE MIR -12 196 37 343 311 133 36 chr20 16006719 16007135 -50660870 + L2 LINE L2 2770 3312 -1 235 250 14 42 chr20 16007608 16007680 -50660325 - MIR SINE MIR 0 262 193 891 220 203 10 chr20 16009218 16009514 -50658491 + L2 LINE L2 1585 1937 -1377 1134 244 76 42 chr20 16009626 16010073 -50657932 - MLT1C LTR MaLR 0 467 6 409 250 158 0 chr20 16010164 16010284 -50657721 - L2 LINE L2 0 3313 3175 1943 158 0 0 chr20 16010340 16010632 -50657373 - AluSx SINE Alu -18 294 3 190 426 45 13 chr20 16011120 16011275 -50656730 + L2 LINE L2 3082 3241 -31 246 300 94 81 chr20 16011321 16011544 -50656461 + MIR SINE MIR 35 260 -2 2048 134 7 3 chr20 16011940 16012231 -50655774 + AluSq SINE Alu 1 292 -21 4307 216 40 5 chr20 16012458 16014018 -50653987 - L1MA9 LINE L1 -39 6273 4655 909 288 28 4 chr20 16014169 16014419 -50653586 + MIR SINE MIR 1 256 -6 195 42 0 0 chr20 16014449 16014473 -50653532 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 447 273 60 40 chr20 16014777 16014877 -50653128 + MIR SINE MIR 108 213 -49 1380 135 36 0 chr20 16014877 16015099 -50652906 - MER30 DNA MER1_type 0 230 1 447 273 60 40 chr20 16015099 16015148 -50652857 + MIR SINE MIR 213 260 -2 550 340 99 0 chr20 16015471 16015633 -50652372 - MER91A DNA MER1_type -1 195 18 1083 275 149 23 chr20 16015716 16016105 -50651900 + MLT1H LTR MaLR 112 549 0 2166 138 0 0 chr20 16016615 16016920 -50651085 + AluSx SINE Alu 1 305 -7 180 176 0 0 chr20 16017160 16017194 -50650811 + CT-rich Low_complexity Low_complexity 2 35 0 2429 63 0 10 chr20 16017422 16017725 -50650280 + AluY SINE Alu 1 300 -11 2185 125 0 0 chr20 16017927 16018224 -50649781 - AluSx SINE Alu -15 297 1 860 288 31 0 chr20 16018355 16018577 -50649428 + MIR SINE MIR 34 262 0 2476 261 104 39 chr20 16018905 16019957 -50648048 + L2 LINE L2 1897 3305 -8 488 278 240 38 chr20 16020395 16020762 -50647243 - MLT1J2 LTR MaLR -7 443 3 486 286 131 0 chr20 16020902 16021070 -50646935 - MIR SINE MIR -71 191 2 2338 101 0 3 chr20 16021637 16021945 -50646060 - AluSg SINE Alu -3 307 1 333 82 0 0 chr20 16022604 16022653 -50645352 + (TG)n Simple_repeat Simple_repeat 2 50 0 2109 126 30 0 chr20 16023022 16023323 -50644682 + AluSx SINE Alu 1 310 -2 214 211 70 56 chr20 16024035 16024106 -50643899 - L2 LINE L2 -8 3305 3234 394 320 56 16 chr20 16024351 16024476 -50643529 - MIR SINE MIR -114 148 19 1382 248 39 45 chr20 16025638 16025787 -50642218 - LTR16C LTR ERVL 0 491 343 1982 130 7 23 chr20 16025787 16026088 -50641917 + AluSx SINE Alu 1 296 -16 1382 248 39 45 chr20 16026088 16026430 -50641575 - LTR16C LTR ERVL -148 343 3 188 211 39 148 chr20 16026607 16026735 -50641270 - MIR SINE MIR -136 126 13 226 284 68 27 chr20 16028439 16028587 -50639418 - L1ME LINE L1 -215 5906 5753 388 310 50 44 chr20 16028602 16028899 -50639106 - L1ME LINE L1 -2212 5596 5298 453 291 22 28 chr20 16029068 16029250 -50638755 - MLT1J LTR MaLR -5 506 326 261 254 134 0 chr20 16029282 16029349 -50638656 - MIR SINE MIR -56 152 77 2283 42 0 0 chr20 16029377 16029641 -50638364 - AluY SINE Alu -9 302 39 30 27 0 0 chr20 16030356 16030393 -50637612 + AT_rich Low_complexity Low_complexity 1 37 0 2209 42 0 4 chr20 16031341 16031603 -50636402 - AluY SINE Alu -9 302 42 2042 134 0 3 chr20 16032458 16032748 -50635257 + AluSx SINE Alu 14 302 -10 565 253 72 9 chr20 16032943 16033164 -50634841 + Charlie7 DNA MER1_type 1451 1685 -927 555 243 47 27 chr20 16033185 16033333 -50634672 + MER21B LTR ERV1 321 471 -392 416 237 64 39 chr20 16033364 16033520 -50634485 + Charlie7 DNA MER1_type 1699 1858 -754 22 0 0 0 chr20 16033679 16033701 -50634304 + AT_rich Low_complexity Low_complexity 1 22 0 273 284 14 14 chr20 16034030 16034171 -50633834 + (TA)n Simple_repeat Simple_repeat 2 142 0 6742 40 0 0 chr20 16034366 16035169 -50632836 - L1PA7 LINE L1 -13 6141 5339 6455 99 4 6 chr20 16035164 16036134 -50631871 - L1P LINE L1 -2107 4039 3072 * 43741 43 5 9 chr20 16036130 16042303 -50625702 - L1PA4 LINE L1 -3 6152 2 14372 139 17 121 chr20 16042302 16043166 -50624839 - L1P LINE L1 -3059 3087 2135 * 1978 122 4 0 chr20 16043166 16043437 -50624568 - AluSg SINE Alu -38 272 1 14372 139 17 121 chr20 16043437 16046005 -50622000 - L1P LINE L1 -4011 2135 12 194 269 128 0 chr20 16047025 16047103 -50620902 - MIR SINE MIR 0 262 175 24 0 0 0 chr20 16047214 16047238 -50620767 + AT_rich Low_complexity Low_complexity 1 24 0 268 312 0 46 chr20 16047285 16047394 -50620611 - L2 LINE L2 -191 3081 2978 242 196 0 0 chr20 16047483 16047534 -50620471 + (TG)n Simple_repeat Simple_repeat 1 51 0 23 0 0 0 chr20 16047628 16047651 -50620354 + AT_rich Low_complexity Low_complexity 1 23 0 5570 153 29 33 chr20 16047657 16048943 -50619062 - L1MA6 LINE L1 0 7719 6428 3189 209 46 54 chr20 16048939 16050573 -50617432 - L1MA6 LINE L1 -3336 4229 2616 * 2195 116 0 3 chr20 16050989 16051283 -50616722 - AluSx SINE Alu -18 294 2 30 0 0 0 chr20 16052323 16052353 -50615652 + AT_rich Low_complexity Low_complexity 1 30 0 1344 224 27 100 chr20 16052634 16053035 -50614970 - LTR16A LTR ERVL -1 449 78 716 193 123 60 chr20 16053035 16053335 -50614670 - L1MDb LINE L1 -4751 1655 1337 * 1615 228 89 78 chr20 16053323 16054338 -50613667 - L1MDb LINE L1 -5477 932 16 25 91 0 10 chr20 16054443 16054522 -50613483 + AT_rich Low_complexity Low_complexity 1 80 -18 1531 155 50 32 chr20 16054522 16054799 -50613206 - AluJo SINE Alu -30 282 1 25 91 0 10 chr20 16054799 16054818 -50613187 + AT_rich Low_complexity Low_complexity 80 98 0 23 54 0 0 chr20 16054897 16054934 -50613071 + AT_rich Low_complexity Low_complexity 1 37 0 202 244 24 0 chr20 16054934 16054975 -50613030 - MIR SINE MIR -143 119 78 23 0 0 0 chr20 16055169 16055192 -50612813 + AT_rich Low_complexity Low_complexity 1 23 0 538 282 46 6 chr20 16056364 16056538 -50611467 + MIR SINE MIR 69 249 -13 522 314 63 6 chr20 16057489 16057664 -50610341 + MIR SINE MIR 14 198 -64 186 311 16 16 chr20 16057825 16057886 -50610119 + L2 LINE L2 3211 3271 -1 2409 84 3 0 chr20 16058023 16058333 -50609672 - AluSp SINE Alu -2 311 1 22 94 0 0 chr20 16058807 16058871 -50609134 + AT_rich Low_complexity Low_complexity 1 64 0 4837 110 7 46 chr20 16058919 16059740 -50608265 - L1MA2 LINE L1 0 6304 5516 264 77 0 0 chr20 16059777 16059816 -50608189 + (CA)n Simple_repeat Simple_repeat 2 40 0 261 243 29 14 chr20 16059820 16059890 -50608115 + L1MC/D LINE L1 5696 5766 -2042 2563 56 0 3 chr20 16060047 16060351 -50607654 + AluY SINE Alu 1 303 -8 37 0 0 0 chr20 16060443 16060480 -50607525 + AT_rich Low_complexity Low_complexity 1 37 0 773 318 122 13 chr20 16060664 16061130 -50606875 - LTR33 LTR ERVL -4 517 1 2251 115 3 0 chr20 16061141 16061446 -50606559 - AluSq SINE Alu -7 306 1 187 292 45 22 chr20 16061837 16061926 -50606079 - MIR SINE MIR -6 256 166 266 339 119 0 chr20 16062246 16062355 -50605650 - L2 LINE L2 -2 3311 3190 279 233 0 81 chr20 16063317 16063403 -50604602 + MIR3 SINE MIR 84 162 -46 186 43 0 0 chr20 16063411 16063434 -50604571 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 916 101 0 16 chr20 16064485 16064614 -50603391 - AluSg/x SINE Alu -11 299 173 23 0 0 0 chr20 16068271 16068294 -50599711 + AT_rich Low_complexity Low_complexity 1 23 0 222 177 32 32 chr20 16068869 16068931 -50599074 + CT-rich Low_complexity Low_complexity 3 64 0 369 216 46 92 chr20 16069183 16069336 -50598669 + MIR SINE MIR 76 221 -41 654 224 159 101 chr20 16069769 16070197 -50597808 - MLT1J LTR MaLR -37 474 22 233 347 31 0 chr20 16071571 16071669 -50596336 - MIR3 SINE MIR -103 105 5 23 0 0 0 chr20 16072391 16072414 -50595591 + AT_rich Low_complexity Low_complexity 1 23 0 614 124 0 0 chr20 16072829 16072926 -50595079 + L1PB3 LINE L1 6058 6154 0 212 217 0 0 chr20 16073037 16073083 -50594922 - L2 LINE L2 0 3313 3268 1936 149 0 14 chr20 16073876 16074172 -50593833 + AluJb SINE Alu 1 292 -20 397 196 9 9 chr20 16074338 16074450 -50593555 + CT-rich Low_complexity Low_complexity 3 114 0 314 211 40 0 chr20 16074645 16074721 -50593284 - L2 LINE L2 -218 3054 2976 21 0 0 0 chr20 16075995 16076016 -50591989 + AT_rich Low_complexity Low_complexity 1 21 0 352 359 16 8 chr20 16078702 16078830 -50589175 + L2 LINE L2 3182 3310 -3 554 307 88 13 chr20 16078846 16079084 -50588921 - MIR SINE MIR -2 260 5 1090 207 0 0 chr20 16080206 16080394 -50587611 - MER5A DNA MER1_type -1 188 1 261 259 127 78 chr20 16080431 16080636 -50587369 + L1M4b LINE L1 20 234 -6625 275 266 40 145 chr20 16080845 16081093 -50586912 + L1M4b LINE L1 956 1177 -5678 1972 137 0 3 chr20 16081296 16081588 -50586417 + AluY SINE Alu 1 291 -20 299 206 108 20 chr20 16081607 16081709 -50586296 + L1M4b LINE L1 1332 1442 -5417 * 684 147 0 37 chr20 16081703 16081839 -50586166 + L1MB3 LINE L1 5955 6085 -98 264 157 29 29 chr20 16081845 16081915 -50586090 - L1MDa LINE L1 -4953 1587 1518 789 191 74 78 chr20 16081964 16082195 -50585810 + L1MB3 LINE L1 5952 6181 -2 441 230 25 81 chr20 16082183 16082344 -50585661 + L1M4b LINE L1 1422 1573 -5286 * 1667 241 55 104 chr20 16082468 16083228 -50584777 + L1M4 LINE L1 352 1074 -5468 361 305 11 11 chr20 16083228 16083323 -50584682 - L2 LINE L2 -27 3286 3192 223 211 19 0 chr20 16083474 16083526 -50584479 + (TCTA)n Simple_repeat Simple_repeat 3 55 0 469 191 16 26 chr20 16083538 16083682 -50584323 + L1ME4a LINE L1 5704 5829 -292 786 275 42 8 chr20 16084150 16084390 -50583615 + MIR SINE MIR 12 259 -3 1298 89 0 5 chr20 16085861 16086051 -50581954 + L1MA1 LINE L1 6113 6301 -1 24 0 0 0 chr20 16086052 16086076 -50581929 + AT_rich Low_complexity Low_complexity 1 24 0 252 86 0 0 chr20 16088524 16088559 -50579446 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 751 296 111 19 chr20 16088893 16089255 -50578750 + MLT1J2 LTR MaLR 56 450 0 3268 160 39 19 chr20 16089919 16090082 -50577923 + L1MA7 LINE L1 5620 5778 -513 375 23 0 0 chr20 16090082 16090126 -50577879 + (CA)n Simple_repeat Simple_repeat 2 45 0 3268 160 39 19 chr20 16090126 16090600 -50577405 + L1MA7 LINE L1 5778 6270 -21 52 58 0 0 chr20 16090600 16090687 -50577318 + AT_rich Low_complexity Low_complexity 1 87 0 198 0 0 0 chr20 16090698 16090720 -50577285 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 21 82 0 0 chr20 16090829 16090878 -50577127 + AT_rich Low_complexity Low_complexity 1 49 0 3752 65 2 0 chr20 16090885 16091378 -50576627 - L1PA7 LINE L1 -948 5198 4705 7120 52 6 0 chr20 16091378 16092312 -50575693 + L1PA7 LINE L1 5201 6139 -15 257 276 86 9 chr20 16092321 16092426 -50575579 - L1 LINE L1 -1152 4994 4882 368 308 40 31 chr20 16092694 16092921 -50575084 - L1 LINE L1 -1638 4508 4280 382 313 60 11 chr20 16093010 16093275 -50574730 - L1 LINE L1 -2001 4145 3868 5177 129 13 4 chr20 16094025 16094849 -50573156 + L1PA15 LINE L1 5321 6152 -13 219 273 45 82 chr20 16095251 16095361 -50572644 + L2 LINE L2 2979 3084 -188 312 211 0 0 chr20 16095538 16095614 -50572391 + (CA)n Simple_repeat Simple_repeat 2 77 0 259 278 0 33 chr20 16096006 16096096 -50571909 - MIR SINE MIR 0 262 176 480 319 51 7 chr20 16096100 16096238 -50571767 + L2 LINE L2 3125 3268 -4 490 244 0 39 chr20 16097452 16097579 -50570426 + L2 LINE L2 3191 3312 -1 352 283 10 0 chr20 16098700 16098799 -50569206 + MER94 DNA DNA 1 100 -34 513 313 78 22 chr20 16099994 16100224 -50567781 - MIR SINE MIR -1 261 19 3687 128 79 65 chr20 16101286 16102060 -50565945 - LTR1 LTR ERV1 0 785 1 1923 77 0 129 chr20 16102739 16103079 -50564926 - AluSp SINE Alu -5 298 3 183 290 70 30 chr20 16103422 16103522 -50564483 - MIR SINE MIR -3 259 156 1357 275 66 54 chr20 16103816 16104409 -50563596 - MLT1L LTR MaLR -15 600 1 874 244 205 32 chr20 16104538 16104948 -50563057 - LTR16C LTR ERVL 0 491 11 1043 218 147 70 chr20 16105776 16106245 -50561760 + MLT1D LTR MaLR 1 505 0 2340 51 3 20 chr20 16106846 16107139 -50560866 - AluY SINE Alu -12 299 12 1464 155 164 49 chr20 16107575 16108020 -50559985 + LTR54B LTR ERV1 1 496 -2 373 368 83 24 chr20 16109559 16109812 -50558193 + L3 LINE CR1 1301 1568 -9 2515 71 0 3 chr20 16109849 16110157 -50557848 + AluSq SINE Alu 1 307 -6 357 82 0 0 chr20 16111254 16111303 -50556702 + (TG)n Simple_repeat Simple_repeat 1 49 0 767 313 123 12 chr20 16111823 16112149 -50555856 - LTR16C LTR ERVL 0 491 130 455 239 115 53 chr20 16112654 16112880 -50555125 - MIR SINE MIR -14 248 9 849 276 85 55 chr20 16113006 16113648 -50554357 + L2 LINE L2 2631 3298 -15 469 302 159 26 chr20 16115901 16116209 -50551796 + L2 LINE L2 2928 3276 -37 208 0 0 59 chr20 16116211 16116245 -50551760 + (CA)n Simple_repeat Simple_repeat 2 33 0 502 300 6 12 chr20 16116615 16116775 -50551230 + Charlie8 DNA MER1_type 62 220 -2197 364 214 39 29 chr20 16117085 16117188 -50550817 + L1ME2 LINE L1 6041 6144 -20 24 32 0 0 chr20 16117604 16117635 -50550370 + AT_rich Low_complexity Low_complexity 1 31 0 588 178 20 0 chr20 16117726 16117827 -50550178 - Tigger7 DNA MER2_type 0 2487 2385 655 221 23 0 chr20 16117836 16117967 -50550038 - Tigger7 DNA MER2_type -309 241 108 419 139 69 14 chr20 16118280 16118352 -50549653 - Tigger5 DNA MER2_type 0 2323 2248 191 283 152 82 chr20 16118943 16119187 -50548818 + MIR SINE MIR 2 262 0 219 69 0 0 chr20 16119193 16119222 -50548783 + (ATG)n Simple_repeat Simple_repeat 2 30 0 1570 266 111 5 chr20 16119227 16119659 -50548346 - LTR16C LTR ERVL -8 483 6 1142 289 107 14 chr20 16122284 16122772 -50545233 - MLT1H LTR MaLR 0 549 17 2773 13 0 0 chr20 16123064 16123367 -50544638 + AluYa5 SINE Alu 1 303 -8 618 254 248 39 chr20 16123393 16123700 -50544305 - LTR16C LTR ERVL -42 449 79 21 0 0 0 chr20 16124014 16124035 -50543970 + AT_rich Low_complexity Low_complexity 1 21 0 341 376 37 0 chr20 16124302 16124411 -50543594 - L2 LINE L2 -2 3270 3158 2245 93 21 0 chr20 16124560 16124850 -50543155 - AluSx SINE Alu -16 296 1 281 78 31 31 chr20 16124907 16124971 -50543034 + (TTCCC)n Simple_repeat Simple_repeat 4 67 0 730 156 19 31 chr20 16124973 16125235 -50542770 + MLT1A1 LTR MaLR 1 303 -62 226 352 19 76 chr20 16125315 16125420 -50542585 + L2 LINE L2 3151 3249 -23 7149 126 37 14 chr20 16127151 16128353 -50539652 - Tigger3b DNA MER2_type -2 1229 1 1722 106 20 27 chr20 16129601 16129894 -50538111 + L1MA1 LINE L1 6011 6301 -1 327 272 116 14 chr20 16130070 16130217 -50537788 - MIR SINE MIR -13 249 88 830 306 61 19 chr20 16130835 16131198 -50536807 + L1MDa LINE L1 19 396 -6144 629 193 103 70 chr20 16131275 16131518 -50536487 + L1MDa LINE L1 2307 2557 -3983 * 4024 191 42 8 chr20 16131516 16132984 -50535021 + L1MB8 LINE L1 4652 6170 -8 1112 254 33 3 chr20 16132985 16133320 -50534685 + L1MDa LINE L1 2542 2886 -3654 33 66 0 0 chr20 16133920 16133981 -50534024 + AT_rich Low_complexity Low_complexity 1 61 0 401 318 46 4 chr20 16134152 16134391 -50533614 - HAL1b LINE L1 -442 906 658 279 0 0 0 chr20 16134936 16134967 -50533038 + (CA)n Simple_repeat Simple_repeat 2 32 0 21 57 0 0 chr20 16135453 16135488 -50532517 + AT_rich Low_complexity Low_complexity 1 35 0 375 222 0 12 chr20 16138044 16138125 -50529880 + L1MC/D LINE L1 5444 5523 -719 686 138 49 0 chr20 16138172 16138295 -50529710 - L1MD1 LINE L1 -8 6234 6106 286 137 0 27 chr20 16138296 16138369 -50529636 - L1MDb LINE L1 -5219 1190 1120 268 155 35 35 chr20 16138365 16138423 -50529582 - L1MD1 LINE L1 -113 6129 6072 * 5484 152 19 12 chr20 16138422 16139983 -50528022 + L1PB4 LINE L1 4586 6156 0 991 175 166 6 chr20 16140003 16140237 -50527768 - L1MD1 LINE L1 -174 6068 5795 345 264 115 46 chr20 16140504 16140678 -50527327 + LTR33 LTR ERVL 328 513 -8 435 247 39 9 chr20 16140708 16140921 -50527084 + L1MC/D LINE L1 5201 5420 -750 822 179 21 0 chr20 16140929 16141074 -50526931 + FAM SINE Alu 22 169 -16 412 326 69 17 chr20 16141199 16141432 -50526573 + LTR16A LTR ERVL 27 271 -179 246 281 40 89 chr20 16141493 16141581 -50526424 + L1MC/D LINE L1 5543 5634 -530 892 214 12 0 chr20 16141581 16141749 -50526256 - FAM SINE Alu -5 170 1 246 281 40 89 chr20 16141749 16142064 -50525941 + L1MC/D LINE L1 5634 5925 -239 1736 238 104 24 chr20 16144525 16145072 -50522933 + L1ME3A LINE L1 5505 6095 -75 414 272 5 94 chr20 16145592 16145783 -50522222 - MER5A DNA MER1_type -9 180 7 967 228 137 20 chr20 16146925 16147487 -50520518 + L1ME3A LINE L1 5511 6170 0 45 34 0 0 chr20 16147487 16147546 -50520459 + AT_rich Low_complexity Low_complexity 1 59 0 206 260 163 42 chr20 16147753 16147879 -50520126 + MIR SINE MIR 30 170 -92 455 305 26 7 chr20 16147888 16148039 -50519966 + L2 LINE L2 3160 3313 0 243 0 0 0 chr20 16149003 16149030 -50518975 + (TTCA)n Simple_repeat Simple_repeat 4 30 0 39 38 0 0 chr20 16149253 16149306 -50518699 + AT_rich Low_complexity Low_complexity 1 53 0 2808 13 0 0 chr20 16149357 16149670 -50518335 + AluYb8 SINE Alu 1 313 -5 2430 173 28 10 chr20 16149672 16150174 -50517831 - Charlie1b DNA MER1_type -6 517 7 28 29 0 0 chr20 16150314 16150349 -50517656 + AT_rich Low_complexity Low_complexity 1 35 0 1772 176 3 13 chr20 16152126 16152439 -50515566 + AluJo SINE Alu 3 312 0 225 0 0 0 chr20 16152439 16152464 -50515541 + (GAGAA)n Simple_repeat Simple_repeat 1 25 0 308 309 93 7 chr20 16152549 16152688 -50515317 - MIR3 SINE MIR -56 152 2 40 0 0 0 chr20 16152764 16152804 -50515201 + AT_rich Low_complexity Low_complexity 1 40 0 2845 9 0 0 chr20 16153752 16154068 -50513937 - AluYb8 SINE Alu -2 316 1 857 242 0 0 chr20 16155855 16156033 -50511972 + MER5B DNA MER1_type 1 178 0 22 56 0 0 chr20 16156207 16156243 -50511762 + AT_rich Low_complexity Low_complexity 1 36 0 474 308 34 72 chr20 16156502 16156794 -50511211 + LTR16C LTR ERVL 190 470 -21 599 315 70 39 chr20 16157846 16158230 -50509775 + LTR16C LTR ERVL 94 489 -2 393 291 57 14 chr20 16158230 16158371 -50509634 + MIR SINE MIR 85 231 -31 1455 174 104 20 chr20 16158968 16159313 -50508692 - MLT1A2 LTR MaLR 0 374 1 22 35 0 0 chr20 16159378 16159407 -50508598 + AT_rich Low_complexity Low_complexity 1 29 0 220 244 0 0 chr20 16159546 16159591 -50508414 + MIR3 SINE MIR 163 207 -1 255 61 0 0 chr20 16160863 16160896 -50507109 + (TG)n Simple_repeat Simple_repeat 2 34 0 527 338 120 40 chr20 16161396 16162221 -50505784 - L1M4c LINE L1 -1300 5240 4350 328 289 0 19 chr20 16162321 16162425 -50505580 - L1M4c LINE L1 -2287 4253 4152 481 197 24 3 chr20 16162435 16162549 -50505456 - L1ME1 LINE L1 0 6184 6065 277 266 54 38 chr20 16162548 16162732 -50505273 - L1M4c LINE L1 -2369 4171 3985 * 694 61 0 20 chr20 16163178 16163276 -50504729 - AluSg1 SINE Alu -56 253 158 806 124 0 0 chr20 16163276 16163389 -50504616 - AluSg1 SINE Alu -196 113 1 470 304 91 71 chr20 16163470 16164330 -50503675 - L1M4c LINE L1 -3169 3371 2462 25 0 0 0 chr20 16164698 16164723 -50503282 + AT_rich Low_complexity Low_complexity 1 25 0 220 255 0 0 chr20 16166419 16166466 -50501539 - L2 LINE L2 -12 3301 3255 1292 151 4 27 chr20 16167050 16167275 -50500730 - AluJb SINE Alu -11 301 82 22 35 0 0 chr20 16169061 16169090 -50498915 + AT_rich Low_complexity Low_complexity 1 29 0 2241 104 0 0 chr20 16169241 16169539 -50498466 + AluSg SINE Alu 3 300 -10 1839 146 23 43 chr20 16169800 16170150 -50497855 - MER61A LTR ERV1 0 343 1 304 312 7 36 chr20 16170237 16170375 -50497630 - L1ME LINE L1 -422 5699 5566 2334 47 0 17 chr20 16170718 16171017 -50496988 - AluY SINE Alu -17 294 1 198 0 0 0 chr20 16171040 16171062 -50496943 + (TA)n Simple_repeat Simple_repeat 2 23 0 543 261 69 27 chr20 16171295 16171483 -50496522 + MIR SINE MIR 7 202 -60 22 0 0 0 chr20 16173788 16173810 -50494195 + AT_rich Low_complexity Low_complexity 1 22 0 209 369 0 0 chr20 16174807 16174872 -50493133 + MIR SINE MIR 87 151 -111 272 208 0 14 chr20 16174952 16175024 -50492981 + (TA)n Simple_repeat Simple_repeat 2 72 0 561 296 115 26 chr20 16175126 16175356 -50492649 - MIR SINE MIR 0 262 12 289 282 61 38 chr20 16175554 16175685 -50492320 + MIR SINE MIR 6 139 -123 1085 166 30 98 chr20 16175762 16175805 -50492200 - ORSL DNA AcHobo 0 275 231 1497 128 149 10 chr20 16175805 16176101 -50491904 - MER1B DNA MER1_type 0 337 1 1085 166 30 98 chr20 16176101 16176352 -50491653 - ORSL DNA AcHobo -44 231 1 2149 163 139 16 chr20 16176609 16177110 -50490895 - MER61D LTR ERV1 0 501 1 182 343 14 14 chr20 16177115 16177188 -50490817 + L2 LINE L2 3195 3267 -5 389 341 88 6 chr20 16178287 16178469 -50489536 - MIR SINE MIR -21 241 45 1808 187 101 14 chr20 16179765 16180192 -50487813 - MLT1C LTR MaLR 0 467 4 444 360 17 21 chr20 16180819 16181052 -50486953 + MIR SINE MIR 7 238 -24 224 250 0 0 chr20 16182478 16182530 -50485475 + A-rich Low_complexity Low_complexity 1 52 0 2198 123 0 10 chr20 16182598 16182906 -50485099 + AluSq SINE Alu 1 305 -8 204 40 0 0 chr20 16183167 16183192 -50484813 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 625 293 134 69 chr20 16183193 16184062 -50483943 - L2 LINE L2 -12 3301 2374 723 269 66 51 chr20 16185716 16185973 -50482032 + MIR SINE MIR 2 262 0 180 0 0 0 chr20 16186080 16186100 -50481905 + (T)n Simple_repeat Simple_repeat 1 20 0 218 188 21 0 chr20 16186216 16186264 -50481741 + L2 LINE L2 3239 3287 -26 25 0 0 0 chr20 16188650 16188675 -50479330 + AT_rich Low_complexity Low_complexity 1 25 0 807 279 18 18 chr20 16188722 16188948 -50479057 + MIR SINE MIR 8 233 -29 559 153 123 106 chr20 16188960 16189130 -50478875 + MER5B DNA MER1_type 1 173 -5 295 323 23 31 chr20 16189154 16189284 -50478721 + L2 LINE L2 3184 3312 -1 1178 268 32 60 chr20 16189532 16189995 -50478010 - LTR16A LTR ERVL 0 450 1 186 321 76 23 chr20 16190298 16190429 -50477576 - L2 LINE L2 -579 2735 2598 322 309 0 0 chr20 16192734 16192828 -50475177 + L2 LINE L2 3179 3272 0 542 322 135 4 chr20 16192940 16193170 -50474835 + MIR SINE MIR 2 261 -1 248 270 153 44 chr20 16193500 16193637 -50474368 + MIR SINE MIR 63 214 -48 991 129 11 11 chr20 16193980 16194002 -50474003 + GA-rich Low_complexity Low_complexity 1 200 0 991 129 11 11 chr20 16194002 16194180 -50473825 + GA-rich Low_complexity Low_complexity 1 178 0 577 313 60 18 chr20 16194383 16194600 -50473405 - MLT1I LTR MaLR -16 393 168 978 259 115 15 chr20 16194733 16195073 -50472932 + MLT1I LTR MaLR 33 406 -3 643 220 70 21 chr20 16195673 16195859 -50472146 + MIR SINE MIR 68 262 0 246 216 72 62 chr20 16196545 16196642 -50471363 + MIR SINE MIR 73 170 -92 26 93 0 0 chr20 16196676 16196751 -50471254 + AT_rich Low_complexity Low_complexity 1 75 0 893 291 20 20 chr20 16197508 16197804 -50470201 + LTR16A LTR ERVL 16 311 -139 1314 305 69 9 chr20 16197936 16198402 -50469603 + HERV16 LTR ERVL 889 1382 -3614 1510 309 97 26 chr20 16198470 16199675 -50468330 + HERV16 LTR ERVL 2484 3951 -1703 2225 115 10 0 chr20 16199675 16199979 -50468026 + AluSq SINE Alu 1 307 -6 1510 309 97 26 chr20 16199979 16200350 -50467655 + HERV16 LTR ERVL 3951 4294 -1360 2051 141 0 10 chr20 16200445 16200751 -50467254 - AluSg SINE Alu -7 303 1 1080 336 42 40 chr20 16200785 16201685 -50466320 + HERV16 LTR ERVL 4511 4906 -90 1100 341 22 17 chr20 16201810 16202226 -50465779 + LTR16A LTR ERVL 18 435 -15 208 316 46 139 chr20 16202375 16202828 -50465177 - L2 LINE L2 0 3272 2862 421 275 170 70 chr20 16202851 16203404 -50464601 - L2 LINE L2 -568 2746 2139 241 340 101 0 chr20 16203443 16203602 -50464403 - L3b LINE CR1 -295 1288 1114 215 31 31 0 chr20 16203775 16203807 -50464198 + (TG)n Simple_repeat Simple_repeat 2 34 0 551 309 63 16 chr20 16204570 16204581 -50463424 - MIR SINE MIR -61 201 192 429 20 0 0 chr20 16204581 16204631 -50463374 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 551 309 63 16 chr20 16204631 16204810 -50463195 - MIR SINE MIR -70 192 2 23 0 0 0 chr20 16205357 16205380 -50462625 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr20 16205520 16205541 -50462464 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 32 26 0 0 chr20 16205661 16205700 -50462305 + AT_rich Low_complexity Low_complexity 1 39 0 1422 152 166 73 chr20 16205706 16206116 -50461889 + LTR54B LTR ERV1 2 459 -39 2411 65 3 16 chr20 16206116 16206425 -50461580 + AluY SINE Alu 1 305 -6 1422 152 166 73 chr20 16206425 16206467 -50461538 + LTR54B LTR ERV1 459 496 -2 22 35 0 0 chr20 16206885 16206914 -50461091 + AT_rich Low_complexity Low_complexity 1 29 0 1381 229 107 36 chr20 16207536 16208003 -50460002 - MLT1D LTR MaLR -1 504 5 233 408 125 0 chr20 16208857 16209009 -50458996 + L2 LINE L2 3098 3268 -4 222 299 13 13 chr20 16210979 16211056 -50456949 + CT-rich Low_complexity Low_complexity 2 78 0 740 232 59 72 chr20 16213114 16213296 -50454709 + MIR SINE MIR 8 188 -74 2200 112 0 7 chr20 16213296 16213600 -50454405 + AluSc SINE Alu 1 302 -7 740 232 59 72 chr20 16213600 16213654 -50454351 + MIR SINE MIR 188 241 -21 1434 249 56 7 chr20 16214618 16215064 -50452941 - Charlie4a DNA MER1_type -1 507 40 196 289 79 40 chr20 16215066 16215142 -50452863 - L2 LINE L2 -56 3216 3138 15538 129 12 5 chr20 16215230 16217609 -50450396 - Tigger1 DNA MER2_type 0 2418 23 28 29 0 0 chr20 16217617 16217652 -50450353 + AT_rich Low_complexity Low_complexity 1 35 0 333 225 45 22 chr20 16218394 16218483 -50449522 + L2 LINE L2 3223 3313 0 211 274 0 0 chr20 16218483 16218534 -50449471 + (TGGA)n Simple_repeat Simple_repeat 2 52 0 292 302 116 0 chr20 16218554 16218683 -50449322 + MIR SINE MIR 106 249 -13 32 109 0 0 chr20 16220603 16220740 -50447265 + AT_rich Low_complexity Low_complexity 1 137 0 312 302 112 12 chr20 16223289 16223458 -50444547 - L1MC4a LINE L1 -1861 5947 5762 366 279 132 0 chr20 16225706 16225842 -50442163 + MER103 DNA DNA 2 155 -11 366 304 72 29 chr20 16227554 16227692 -50440313 + MIR SINE MIR 2 145 -117 1652 159 0 18 chr20 16227707 16227844 -50440161 - AluJo SINE Alu -41 271 140 2521 60 0 0 chr20 16227844 16228145 -50439860 - AluY SINE Alu -10 301 1 1652 159 0 18 chr20 16228145 16228283 -50439722 - AluJo SINE Alu -172 140 1 856 281 65 8 chr20 16228362 16228690 -50439315 + LTR16C LTR ERVL 79 477 -14 193 200 0 0 chr20 16228700 16228735 -50439270 + MIR SINE MIR 201 235 -27 21 0 0 0 chr20 16228735 16228756 -50439249 + AT_rich Low_complexity Low_complexity 1 21 0 2199 111 3 0 chr20 16228892 16229189 -50438816 + AluSx SINE Alu 1 298 -14 365 81 16 0 chr20 16229947 16230009 -50437996 + (TG)n Simple_repeat Simple_repeat 2 64 0 205 285 21 111 chr20 16230626 16230770 -50437235 - MIR SINE MIR -62 146 16 315 307 44 44 chr20 16230823 16230960 -50437045 - MIR3 SINE MIR 0 208 72 184 42 0 0 chr20 16233234 16233258 -50434747 + (TTTG)n Simple_repeat Simple_repeat 1 112 0 1752 146 7 4 chr20 16233258 16233540 -50434465 - AluSx SINE Alu -1 306 1 21 0 0 0 chr20 16233550 16233571 -50434434 + AT_rich Low_complexity Low_complexity 1 21 0 846 234 11 5 chr20 16233571 16233755 -50434250 - MER5A DNA MER1_type -1 188 4 312 259 63 21 chr20 16233786 16233929 -50434076 + L1ME4a LINE L1 5971 6119 -2 23 54 0 0 chr20 16234398 16234435 -50433570 + AT_rich Low_complexity Low_complexity 1 37 0 5333 138 3 0 chr20 16235174 16236295 -50431710 - L1PA16 LINE L1 -13 6153 5037 315 227 93 0 chr20 16236678 16236775 -50431230 + L1MC4 LINE L1 7658 7763 -279 6111 120 19 7 chr20 16236781 16238107 -50429898 + L1PA13 LINE L1 4804 6143 -20 363 44 0 0 chr20 16238147 16238192 -50429813 + (CA)n Simple_repeat Simple_repeat 2 46 0 378 200 0 78 chr20 16238236 16238351 -50429654 + L1MC4 LINE L1 7935 8040 -2 414 332 86 5 chr20 16239359 16239546 -50428459 - MIR SINE MIR -41 221 20 218 323 97 32 chr20 16239755 16239848 -50428157 + L2 LINE L2 3174 3272 0 1752 148 28 28 chr20 16242505 16242795 -50425210 + AluJo SINE Alu 5 294 -18 26 0 0 0 chr20 16245548 16245574 -50422431 + AT_rich Low_complexity Low_complexity 1 26 0 260 238 32 0 chr20 16245741 16245804 -50422201 - MLT1L LTR MaLR -550 65 1 183 42 0 0 chr20 16246684 16246708 -50421297 + (ATG)n Simple_repeat Simple_repeat 3 26 0 2033 252 85 6 chr20 16246712 16247204 -50420801 - MLT1H LTR MaLR -18 531 1 511 206 57 43 chr20 16247206 16247347 -50420658 - MIR SINE MIR -10 252 110 370 262 23 45 chr20 16247387 16247635 -50420370 - Charlie7 DNA MER1_type -2 2610 21 251 388 14 14 chr20 16248001 16248148 -50419857 - MER5A DNA MER1_type -5 184 38 227 288 89 89 chr20 16248146 16248264 -50419741 + MIR SINE MIR 22 142 -120 * 2399 97 0 3 chr20 16248264 16248573 -50419432 + AluSq SINE Alu 1 308 -5 227 288 89 89 chr20 16248573 16248645 -50419360 + MIR SINE MIR 141 212 -50 387 254 99 49 chr20 16249036 16249178 -50418827 - MIR SINE MIR -4 258 110 12909 89 5 11 chr20 16249684 16251545 -50416460 + L1P LINE L1 1490 3339 -2807 1137 306 63 5 chr20 16252603 16253028 -50414977 - MLT1J2 LTR MaLR 0 450 1 361 334 46 66 chr20 16253820 16254245 -50413760 - L2 LINE L2 -167 3105 2661 475 324 56 59 chr20 16254481 16254889 -50413116 + L1ME2 LINE L1 47 453 -5617 453 267 30 55 chr20 16255154 16255565 -50412440 + L1ME2 LINE L1 530 920 -5150 2414 243 96 17 chr20 16255571 16256374 -50411631 + L1ME2 LINE L1 5217 6082 -16 259 255 193 55 chr20 16256462 16256607 -50411398 + MIR SINE MIR 11 175 -87 272 180 34 11 chr20 16257027 16257116 -50410889 + (TA)n Simple_repeat Simple_repeat 1 91 0 393 276 96 52 chr20 16257120 16257464 -50410541 - L1MC4a LINE L1 -157 5964 5606 2451 84 3 0 chr20 16257498 16257806 -50410199 - AluSp SINE Alu -4 309 1 206 322 0 56 chr20 16257906 16257996 -50410009 - MIR SINE MIR -32 230 146 192 77 0 0 chr20 16258337 16258363 -50409642 + (TAA)n Simple_repeat Simple_repeat 2 27 0 728 257 45 20 chr20 16259036 16259238 -50408767 - MER63A DNA MER1_type -2 208 2 22 0 0 0 chr20 16259276 16259298 -50408707 + GC_rich Low_complexity Low_complexity 1 22 0 291 130 29 14 chr20 16259753 16259822 -50408183 + (TA)n Simple_repeat Simple_repeat 2 71 0 2054 148 33 9 chr20 16260724 16260797 -50407208 + MER7A DNA MER2_type 4 74 -2964 2137 140 20 8 chr20 16260797 16261154 -50406851 - MER46B DNA MER2_type 0 236 1 2054 148 33 9 chr20 16261154 16261417 -50406588 + MER7A DNA MER2_type 74 346 0 724 255 214 25 chr20 16263613 16264087 -50403918 + L2 LINE L2 2772 3313 0 907 217 44 0 chr20 16265337 16265517 -50402488 + MER58A DNA MER1_type 37 224 0 2137 110 3 13 chr20 16265535 16265844 -50402161 - AluSx SINE Alu -6 306 1 783 175 181 0 chr20 16266717 16266877 -50401128 + MER5A DNA MER1_type 1 189 0 412 367 20 15 chr20 16266997 16267196 -50400809 + L2 LINE L2 3114 3313 0 355 312 30 40 chr20 16268562 16268761 -50399244 - L2 LINE L2 0 3313 3117 406 342 87 6 chr20 16268903 16269064 -50398941 - MIR3 SINE MIR -19 189 16 1516 211 49 59 chr20 16269495 16269697 -50398308 + MLT1F1 LTR MaLR 6 209 -358 1272 234 130 37 chr20 16269697 16270159 -50397846 - MLT1D LTR MaLR 0 505 1 1516 211 49 59 chr20 16270159 16270561 -50397444 + MLT1F1 LTR MaLR 209 567 0 282 29 0 0 chr20 16270796 16270831 -50397174 + (TAGA)n Simple_repeat Simple_repeat 1 35 0 297 333 0 18 chr20 16272599 16272713 -50395292 - L2 LINE L2 -1 3312 3201 180 211 0 105 chr20 16272736 16272793 -50395212 - MIR SINE MIR -155 107 57 569 286 155 5 chr20 16272884 16273097 -50394908 + MIR SINE MIR 13 257 -5 422 268 107 39 chr20 16273102 16273307 -50394698 + L2 LINE L2 3033 3251 -62 184 121 96 0 chr20 16273370 16273453 -50394552 + (TTTAA)n Simple_repeat Simple_repeat 4 94 0 324 0 0 0 chr20 16275150 16275186 -50392819 + (TG)n Simple_repeat Simple_repeat 2 37 0 957 188 39 19 chr20 16276440 16276648 -50391357 - MIR SINE MIR -32 230 19 1074 144 0 0 chr20 16277181 16277361 -50390644 + (TA)n Simple_repeat Simple_repeat 1 180 0 2118 130 0 0 chr20 16277363 16277655 -50390350 - AluSq SINE Alu -21 292 1 357 250 28 28 chr20 16277657 16277843 -50390162 - L1ME3A LINE L1 -297 5873 5683 278 291 13 25 chr20 16278094 16278173 -50389832 + MIR3 SINE MIR 11 88 -120 432 241 124 51 chr20 16278196 16278333 -50389672 + FRAM SINE Alu 1 147 -19 21 36 0 0 chr20 16278333 16278361 -50389644 + AT_rich Low_complexity Low_complexity 1 28 0 2181 113 0 3 chr20 16278362 16278655 -50389350 - AluSx SINE Alu -20 292 1 895 207 152 13 chr20 16278973 16279210 -50388795 + LTR16C LTR ERVL 222 491 0 391 218 188 15 chr20 16279452 16279585 -50388420 - MLT1A2 LTR MaLR -64 310 155 675 264 46 32 chr20 16279603 16279883 -50388122 - L1MA9 LINE L1 -37 6275 5992 28 29 0 0 chr20 16279956 16279991 -50388014 + AT_rich Low_complexity Low_complexity 1 35 0 220 186 34 0 chr20 16280505 16280564 -50387441 + CT-rich Low_complexity Low_complexity 2 62 0 2170 122 0 0 chr20 16280661 16280956 -50387049 + AluSc SINE Alu 1 295 -14 534 336 76 0 chr20 16282562 16282785 -50385220 + MIR SINE MIR 2 241 -21 934 249 14 0 chr20 16282877 16283094 -50384911 - MER58A DNA MER1_type -4 220 1 2262 94 0 7 chr20 16283236 16283545 -50384460 - AluSg SINE Alu -3 307 1 218 175 0 0 chr20 16284007 16284047 -50383958 + (CA)n Simple_repeat Simple_repeat 1 40 0 23 0 0 0 chr20 16284614 16284637 -50383368 + AT_rich Low_complexity Low_complexity 1 23 0 204 278 0 0 chr20 16287731 16287785 -50380220 + (TG)n Simple_repeat Simple_repeat 1 54 0 423 263 31 56 chr20 16287889 16288049 -50379956 - MIR SINE MIR -78 184 29 356 266 103 101 chr20 16288945 16289390 -50378615 + L2 LINE L2 2591 3035 -237 2616 102 16 8 chr20 16289627 16289999 -50378006 - THE1C LTR MaLR 0 375 1 25 31 0 0 chr20 16291637 16291669 -50376336 + AT_rich Low_complexity Low_complexity 1 32 0 195 100 0 0 chr20 16292593 16292623 -50375382 + (CA)n Simple_repeat Simple_repeat 2 31 0 2417 89 0 0 chr20 16292645 16292949 -50375056 + AluSg SINE Alu 6 309 -1 185 293 63 63 chr20 16293290 16293495 -50374510 + MER5C DNA MER1_type 26 230 -94 2357 86 3 0 chr20 16293579 16293870 -50374135 + AluSc SINE Alu 1 292 -17 310 100 33 0 chr20 16294090 16294150 -50373855 + GA-rich Low_complexity Low_complexity 3 64 0 2114 121 0 0 chr20 16295170 16295476 -50372529 - AluSc SINE Alu 0 309 4 2149 112 6 3 chr20 16295600 16295912 -50372093 + AluSq SINE Alu 1 313 0 359 102 0 0 chr20 16295984 16296033 -50371972 + Alu SINE Alu 243 291 -11 207 362 24 31 chr20 16296281 16296408 -50371597 + L2 LINE L2 2717 2842 -472 235 167 206 78 chr20 16296640 16296742 -50371263 - MLT1H LTR MaLR -1 548 434 338 193 140 35 chr20 16296870 16296984 -50371021 - MLT1H LTR MaLR -395 154 29 180 306 48 0 chr20 16297158 16297220 -50370785 + L2 LINE L2 3199 3263 -9 463 309 66 7 chr20 16298838 16298990 -50369015 + MIR SINE MIR 3 163 -99 2153 307 93 13 chr20 16299168 16300129 -50367876 - L2 LINE L2 -238 3075 2023 1062 261 159 6 chr20 16300177 16300522 -50367483 - LTR16C LTR ERVL -10 481 84 608 278 90 0 chr20 16301185 16301408 -50366597 - MIR SINE MIR 0 262 20 1872 149 0 14 chr20 16301884 16302166 -50365839 + AluJb SINE Alu 9 286 -26 186 43 0 0 chr20 16302167 16302190 -50365815 + (GA)n Simple_repeat Simple_repeat 2 24 0 21 0 0 0 chr20 16303299 16303320 -50364685 + AT_rich Low_complexity Low_complexity 1 21 0 335 333 53 67 chr20 16303922 16304147 -50363858 + L1MEd LINE L1 2 223 -5896 545 299 110 50 chr20 16304200 16305245 -50362760 + L1MEd LINE L1 465 1581 -4548 393 86 0 0 chr20 16305607 16305665 -50362340 + (CA)n Simple_repeat Simple_repeat 1 58 0 2082 164 68 17 chr20 16306256 16306739 -50361266 + Charlie1b DNA MER1_type 10 517 -6 26 30 0 0 chr20 16308082 16308115 -50359890 + AT_rich Low_complexity Low_complexity 1 33 0 499 283 14 35 chr20 16308445 16308657 -50359348 + MIR SINE MIR 16 221 -41 22 0 0 0 chr20 16308814 16308836 -50359169 + AT_rich Low_complexity Low_complexity 1 22 0 2371 92 0 10 chr20 16308844 16309158 -50358847 + AluY SINE Alu 1 311 0 4448 187 18 31 chr20 16309299 16310198 -50357807 + L1MB5 LINE L1 4675 5550 -624 1587 183 11 14 chr20 16310198 16310514 -50357491 + AluJb SINE Alu 6 320 0 4448 187 18 31 chr20 16310514 16311101 -50356904 + L1MB5 LINE L1 5550 6143 -31 633 350 62 0 chr20 16311247 16311473 -50356532 - MIR SINE MIR -22 240 1 6940 53 30 0 chr20 16311597 16312498 -50355507 - L1PA7 LINE L1 -15 6139 5233 243 299 179 0 chr20 16313121 16313238 -50354767 + L2 LINE L2 3176 3313 0 200 176 39 0 chr20 16313297 16313348 -50354657 + (TA)n Simple_repeat Simple_repeat 1 53 0 23 0 0 0 chr20 16313538 16313561 -50354444 + AT_rich Low_complexity Low_complexity 1 23 0 373 296 81 31 chr20 16313698 16314202 -50353803 + L1MC4a LINE L1 5512 5675 -446 347 216 43 35 chr20 16314610 16314726 -50353279 + L1ME4a LINE L1 5940 6056 -65 543 327 71 4 chr20 16314776 16315002 -50353003 - MIR SINE MIR -15 247 7 2524 28 0 0 chr20 16317382 16317693 -50350312 - AluYa5 SINE Alu 0 311 1 1838 210 73 21 chr20 16317838 16318318 -50349687 + MLT1D LTR MaLR 1 505 0 1787 242 50 14 chr20 16318323 16318807 -50349198 + MLT1D LTR MaLR 3 503 -2 771 181 17 6 chr20 16318953 16319130 -50348875 - L1MA8 LINE L1 -4 6287 6109 417 218 71 101 chr20 16319250 16319601 -50348404 + MLT1H1 LTR MaLR 123 549 -6 444 264 244 0 chr20 16320129 16320326 -50347679 + MIR SINE MIR 6 250 -12 379 255 78 161 chr20 16322729 16323090 -50344915 + L2 LINE L2 2929 3259 -13 280 77 39 19 chr20 16324027 16324079 -50343926 + GA-rich Low_complexity Low_complexity 3 55 0 1248 175 24 0 chr20 16324469 16324715 -50343290 + L1MB2 LINE L1 5913 6164 -7 1773 180 7 0 chr20 16325068 16325387 -50342618 - AluJb SINE Alu 0 321 1 25 0 0 0 chr20 16325393 16325418 -50342587 + AT_rich Low_complexity Low_complexity 1 25 0 1659 256 35 111 chr20 16325526 16326658 -50341347 - L1M4 LINE L1 -5330 1212 168 198 250 0 0 chr20 16326814 16326862 -50341143 + MIR SINE MIR 185 232 -30 1993 180 36 5 chr20 16328075 16328463 -50339542 + MER67A LTR ERV1 4 403 -140 572 300 94 68 chr20 16329256 16329723 -50338282 - L2 LINE L2 -349 2965 2487 537 306 128 26 chr20 16329724 16330028 -50337977 + MLT1H LTR MaLR 1 335 -214 1957 183 8 11 chr20 16330232 16330598 -50337407 + MLT1A1 LTR MaLR 1 365 0 2050 80 91 14 chr20 16330883 16331170 -50336835 - AluSp SINE Alu -2 311 3 594 253 93 0 chr20 16331706 16331856 -50336149 - MER5A DNA MER1_type -1 188 25 307 288 96 16 chr20 16332607 16332857 -50335148 - L1ME4a LINE L1 -98 6023 5754 217 229 21 0 chr20 16332884 16332932 -50335073 + CT-rich Low_complexity Low_complexity 2 50 0 342 0 0 0 chr20 16333270 16333308 -50334697 + (CA)n Simple_repeat Simple_repeat 2 39 0 434 302 13 13 chr20 16333312 16333471 -50334534 + L1ME3A LINE L1 6011 6169 -1 261 276 16 24 chr20 16333640 16333763 -50334242 + L1MEd LINE L1 709 830 -5289 279 136 86 0 chr20 16333895 16333976 -50334029 - Charlie5 DNA MER1_type -23 2589 2502 636 157 10 0 chr20 16334076 16334178 -50333827 - L1ME4a LINE L1 -526 5652 5550 3561 178 17 27 chr20 16334182 16334743 -50333262 - L1MB5 LINE L1 -6 6168 5614 500 56 11 124 chr20 16334743 16334781 -50333224 + MADE1 DNA Mariner 2 26 -54 2330 71 3 14 chr20 16334781 16335078 -50332927 - AluY SINE Alu -17 294 1 500 56 11 124 chr20 16335078 16335128 -50332877 + MADE1 DNA Mariner 26 80 0 3561 178 17 27 chr20 16335128 16335259 -50332746 - L1MB5 LINE L1 -560 5614 5483 2524 62 0 16 chr20 16335259 16335590 -50332415 - AluSc SINE Alu 0 309 1 579 295 142 18 chr20 16335962 16336294 -50331711 - L2 LINE L2 -2 3311 2939 545 322 150 10 chr20 16336305 16336619 -50331386 - L2 LINE L2 -1 3312 2955 7905 43 2 8 chr20 16336807 16338069 -50329936 - L1PA5 LINE L1 -2 6152 4894 6334 53 5 1 chr20 16338069 16338858 -50329147 + L1P LINE L1 3968 4759 -1387 227 79 26 0 chr20 16339895 16339933 -50328072 + (TA)n Simple_repeat Simple_repeat 1 39 0 24 32 0 0 chr20 16339936 16339967 -50328038 + AT_rich Low_complexity Low_complexity 1 31 0 935 309 30 13 chr20 16341118 16341506 -50326499 - LTR16A1 LTR ERVL 0 457 86 640 280 69 18 chr20 16341522 16341740 -50326265 - L2 LINE L2 -2284 1030 802 1235 280 98 17 chr20 16341740 16342211 -50325794 + MER20B DNA MER1_type 1 509 -274 538 174 0 32 chr20 16342255 16342410 -50325595 + GA-rich Low_complexity Low_complexity 3 152 0 505 299 122 9 chr20 16343213 16343427 -50324578 - MER102a DNA MER1_type -25 305 68 2445 157 75 20 chr20 16344008 16344836 -50323169 - MER21A LTR ERV1 0 931 1 275 273 189 78 chr20 16344885 16345219 -50322786 + L1ME LINE L1 5457 5827 -294 384 190 0 0 chr20 16345352 16345431 -50322574 + GA-rich Low_complexity Low_complexity 2 80 0 1609 206 55 16 chr20 16345773 16345806 -50322199 + MER63B DNA MER1_type 4 34 -1028 180 0 0 0 chr20 16345806 16345826 -50322179 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 1609 206 55 16 chr20 16345826 16346175 -50321830 + MER63B DNA MER1_type 34 401 -35 365 286 23 15 chr20 16346558 16346691 -50321314 + LTR16C LTR ERVL 358 491 0 617 193 99 156 chr20 16346982 16347082 -50320923 + MLT1G LTR MaLR 1 105 -490 2217 166 40 3 chr20 16347082 16347432 -50320573 - MLT1A1 LTR MaLR -1 364 2 617 193 99 156 chr20 16347432 16347669 -50320336 + MLT1G LTR MaLR 105 312 -283 264 137 0 0 chr20 16347676 16347727 -50320278 + (GA)n Simple_repeat Simple_repeat 2 52 0 1287 205 75 57 chr20 16347949 16348077 -50319928 - L1MC4 LINE L1 -5 8037 7913 288 0 0 0 chr20 16348077 16348109 -50319896 + (CA)n Simple_repeat Simple_repeat 2 33 0 1287 205 75 57 chr20 16348109 16348316 -50319689 - L1MC4 LINE L1 -129 7913 7689 2181 123 26 15 chr20 16348316 16348658 -50319347 - L1PA16 LINE L1 -9 6157 5812 1287 205 75 57 chr20 16348658 16348774 -50319231 - L1MC4 LINE L1 -353 7689 7577 377 179 15 0 chr20 16349443 16349510 -50318495 - Charlie4 DNA MER1_type -25 1936 1869 228 146 18 36 chr20 16349550 16349605 -50318400 + LTR13 LTR ERVK 662 715 -292 296 307 20 7 chr20 16349607 16349757 -50318248 + (CATATA)n Simple_repeat Simple_repeat 1 152 0 460 302 36 0 chr20 16349757 16349896 -50318109 - MER82 DNA MER2_type 0 653 510 891 28 19 0 chr20 16349896 16350004 -50318001 + AluY SINE Alu 1 110 -201 21 0 0 0 chr20 16350422 16350443 -50317562 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr20 16350801 16350830 -50317175 + AT_rich Low_complexity Low_complexity 1 29 0 443 184 265 0 chr20 16351617 16351753 -50316252 - MER5B DNA MER1_type 0 178 7 417 276 116 86 chr20 16352065 16352770 -50315235 + L1M2 LINE L1 526 1251 -5598 373 258 68 15 chr20 16353095 16353227 -50314778 - L1ME LINE L1 -511 5659 5521 1033 164 17 28 chr20 16353933 16354110 -50313895 + FAM SINE Alu 1 175 0 555 299 29 0 chr20 16354305 16354479 -50313526 - MLT1I LTR MaLR 0 409 231 889 272 112 33 chr20 16354585 16354978 -50313027 - MLT1H LTR MaLR -111 438 15 275 185 49 11 chr20 16355031 16355118 -50312887 - MLT1I LTR MaLR -263 146 92 180 150 125 0 chr20 16355602 16355642 -50312363 + MER5B DNA MER1_type 107 151 -27 197 270 112 22 chr20 16355748 16355837 -50312168 - MIR SINE MIR -30 232 136 2524 269 91 63 chr20 16355969 16356431 -50311574 - L2 LINE L2 0 3313 2866 2029 131 3 22 chr20 16356431 16356745 -50311260 - AluSx SINE Alu -4 308 1 2524 269 91 63 chr20 16356745 16357173 -50310832 - L2 LINE L2 -447 2866 2452 432 46 215 0 chr20 16357173 16357238 -50310767 - MADE1 DNA Mariner -1 79 1 2524 269 91 63 chr20 16357238 16357659 -50310346 - L2 LINE L2 -861 2452 1950 772 264 155 22 chr20 16358555 16358968 -50309037 + HAL1 LINE L1 3 470 -2037 309 220 98 61 chr20 16359147 16359279 -50308726 + HAL1 LINE L1 2354 2490 -17 374 303 84 34 chr20 16360026 16360264 -50307741 - L1M4 LINE L1 -2475 3671 3422 803 178 25 31 chr20 16360496 16360659 -50307346 + MLT1J2 LTR MaLR 17 178 -272 845 236 137 92 chr20 16360683 16361243 -50306762 - MLT1H LTR MaLR -2 553 1 244 232 13 6 chr20 16361351 16361440 -50306565 + MLT1J1 LTR MaLR 288 413 -33 1188 206 4 4 chr20 16361449 16361677 -50306328 - AluJo SINE Alu -21 291 64 324 282 34 0 chr20 16362115 16362232 -50305773 - L1MEd LINE L1 -5954 165 45 476 212 12 0 chr20 16362727 16362812 -50305193 - LTR16C LTR ERVL 0 491 406 1707 160 108 18 chr20 16362930 16363262 -50304743 - MLT1A1 LTR MaLR -3 362 1 601 154 24 0 chr20 16363412 16363535 -50304470 + GA-rich Low_complexity Low_complexity 3 128 0 255 304 22 0 chr20 16363796 16363888 -50304117 + MLT1H LTR MaLR 119 212 -337 346 274 83 24 chr20 16364405 16364573 -50303432 + LTR33A LTR ERVL 343 520 -3 819 293 85 64 chr20 16364747 16365299 -50302706 + L2 LINE L2 2431 2992 -321 180 388 31 0 chr20 16365392 16365521 -50302484 + L2 LINE L2 3005 3137 -176 320 117 0 33 chr20 16365575 16365635 -50302370 + (TTTC)n Simple_repeat Simple_repeat 3 60 0 253 347 60 49 chr20 16365749 16366098 -50301907 - L2 LINE L2 -746 2568 2216 213 284 11 0 chr20 16366142 16366230 -50301775 + (TA)n Simple_repeat Simple_repeat 1 89 0 632 281 109 42 chr20 16367300 16367702 -50300303 - MLT1J2 LTR MaLR -1 449 21 577 188 83 111 chr20 16367721 16367864 -50300141 + MIR SINE MIR 60 199 -63 2975 67 5 8 chr20 16367864 16368237 -50299768 + L1PA6 LINE L1 5768 6139 -15 577 188 83 111 chr20 16368237 16368274 -50299731 + MIR SINE MIR 199 235 -27 1212 224 71 88 chr20 16368387 16368897 -50299108 + MLT1D LTR MaLR 3 503 -2 218 372 22 15 chr20 16368901 16369038 -50298967 - L2 LINE L2 -213 3059 2922 2147 101 21 0 chr20 16369115 16369401 -50298604 + AluSc SINE Alu 1 292 -17 661 291 19 5 chr20 16369678 16369888 -50298117 - LTR16A1 LTR ERVL 0 457 245 312 179 0 0 chr20 16370393 16370449 -50297556 + MER5A DNA MER1_type 132 187 -2 239 292 0 0 chr20 16370479 16370527 -50297478 + MIR SINE MIR 4 51 -211 2123 114 6 25 chr20 16370598 16370914 -50297091 - AluSx SINE Alu -2 310 1 246 95 0 0 chr20 16371658 16371700 -50296305 + (TAA)n Simple_repeat Simple_repeat 3 44 0 520 265 23 0 chr20 16372166 16372298 -50295707 + MLT1H LTR MaLR 392 526 -23 2475 247 44 19 chr20 16373353 16374086 -50293919 + L1ME3A LINE L1 5417 6167 -3 230 258 11 65 chr20 16374173 16374266 -50293739 + MIR SINE MIR 110 197 -65 772 242 11 16 chr20 16375428 16375610 -50292395 + MER5A DNA MER1_type 1 181 -8 803 231 121 10 chr20 16375628 16375827 -50292178 - MER58A DNA MER1_type -3 221 1 481 293 21 14 chr20 16376091 16376231 -50291774 - MIR SINE MIR -109 153 13 2119 145 3 0 chr20 16376355 16376666 -50291339 + AluSx SINE Alu 1 312 0 214 333 136 34 chr20 16377556 16377703 -50290302 - MER5B DNA MER1_type -16 162 1 1230 237 153 58 chr20 16377757 16377897 -50290108 - MLT1H LTR MaLR -2 547 422 2208 157 97 40 chr20 16377897 16377998 -50290007 + MSTA LTR MaLR 4 98 -330 2074 120 0 44 chr20 16377998 16378315 -50289690 - AluY SINE Alu -8 303 1 2208 157 97 40 chr20 16378315 16378615 -50289390 + MSTA LTR MaLR 98 428 0 1230 237 153 58 chr20 16378615 16378972 -50289033 - MLT1H LTR MaLR -127 422 3 568 287 11 55 chr20 16379706 16379887 -50288118 - MER5B DNA MER1_type 0 178 6 337 388 22 27 chr20 16380192 16380416 -50287589 + MIR SINE MIR 30 252 -10 332 0 0 0 chr20 16380836 16380874 -50287131 - L1P LINE L1 -1823 4323 4286 257 132 0 57 chr20 16380874 16380927 -50287078 + Charlie5 DNA MER1_type 2514 2563 -49 2074 114 6 25 chr20 16381123 16381439 -50286566 + AluSg SINE Alu 1 310 0 2048 158 40 109 chr20 16381773 16382222 -50285783 - MER47B DNA MER2_type 0 418 1 21 0 0 0 chr20 16382411 16382432 -50285573 + AT_rich Low_complexity Low_complexity 1 21 0 1703 229 29 53 chr20 16382496 16382950 -50285055 + LTR47B LTR ERVL 1 443 0 233 0 62 0 chr20 16383190 16383222 -50284783 + (TTTC)n Simple_repeat Simple_repeat 2 35 0 7421 152 45 43 chr20 16383366 16383449 -50284556 - L1MCa LINE L1 -4496 1930 1849 2262 93 0 3 chr20 16383449 16383767 -50284238 - AluSx SINE Alu 0 312 1 7421 152 45 43 chr20 16383767 16385078 -50282927 - L1MCa LINE L1 -4577 1849 542 1972 83 9 98 chr20 16385078 16385244 -50282761 - AluSx SINE Alu -16 296 117 204 40 0 0 chr20 16385244 16385269 -50282736 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2409 43 0 0 chr20 16385269 16385547 -50282458 - AluY SINE Alu -28 283 6 1972 83 9 98 chr20 16385547 16385704 -50282301 - AluSx SINE Alu -193 119 1 7421 152 45 43 chr20 16385704 16386016 -50281989 - L1MCa LINE L1 -5884 542 121 1135 215 82 61 chr20 16386144 16386538 -50281467 + L1MCb LINE L1 574 980 -5119 438 53 0 0 chr20 16386538 16386595 -50281410 + (CA)n Simple_repeat Simple_repeat 2 58 0 1135 215 82 61 chr20 16386595 16386870 -50281135 + L1MCb LINE L1 980 1248 -4851 * 5740 202 38 33 chr20 16386869 16387761 -50280244 + L1MC3 LINE L1 5055 4650 -1496 2185 150 18 10 chr20 16387761 16388148 -50279857 + MLT1B LTR MaLR 1 390 0 5740 202 38 33 chr20 16388148 16388907 -50279098 + L1MC3 LINE L1 4649 5403 -743 310 220 113 81 chr20 16388937 16389078 -50278927 + L1MD3 LINE L1 6847 6997 -998 2420 176 31 0 chr20 16389078 16389493 -50278512 + MSTA LTR MaLR 1 428 0 310 220 113 81 chr20 16389493 16389537 -50278468 + L1MD3 LINE L1 6997 7038 -957 2542 164 40 31 chr20 16389548 16390127 -50277878 + L1MC3 LINE L1 7201 7784 -1 3765 180 19 12 chr20 16390139 16390941 -50277064 + L1MB7 LINE L1 5347 6153 -31 233 170 6 39 chr20 16390942 16391003 -50277002 - Charlie5 DNA MER1_type -200 2412 2327 723 205 152 0 chr20 16391072 16391223 -50276782 + MER5A DNA MER1_type 10 183 -6 24 0 0 0 chr20 16391728 16391752 -50276253 + AT_rich Low_complexity Low_complexity 1 24 0 399 285 102 75 chr20 16392606 16392643 -50275362 + L2 LINE L2 1509 1544 -1770 2459 77 0 0 chr20 16392643 16392954 -50275051 - AluY SINE Alu 0 311 1 399 285 102 75 chr20 16392954 16393221 -50274784 + L2 LINE L2 1544 1821 -1493 1777 244 129 10 chr20 16393221 16393716 -50274289 + MER68 LTR ERV1 1 554 -8 997 283 26 10 chr20 16393722 16394029 -50273976 + L2 LINE L2 1813 2124 -1190 701 290 142 60 chr20 16394032 16394067 -50273938 - L2 LINE L2 -1432 1882 1851 2052 154 7 3 chr20 16394067 16394365 -50273640 - AluSx SINE Alu -13 299 1 701 290 142 60 chr20 16394365 16394842 -50273163 - L2 LINE L2 -1463 1851 1328 283 185 37 0 chr20 16395179 16395233 -50272772 + MER21B LTR ERV1 12 67 -796 2377 244 52 40 chr20 16395271 16396000 -50272005 + MER21B LTR ERV1 19 756 -107 1318 205 18 76 chr20 16396001 16396381 -50271624 - MLT1A1 LTR MaLR 0 365 8 599 335 94 19 chr20 16396496 16396964 -50271041 - L2 LINE L2 -959 2355 1853 2292 113 3 0 chr20 16398883 16399194 -50268811 + AluSx SINE Alu 1 312 0 180 0 0 0 chr20 16399382 16399402 -50268603 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 3803 165 42 9 chr20 16399978 16400772 -50267233 + Charlie1 DNA MER1_type 1589 2408 -353 348 222 153 0 chr20 16400771 16400915 -50267090 + Charlie1 DNA MER1_type 2596 2761 0 * 487 324 94 9 chr20 16401309 16401522 -50266483 - MIR SINE MIR -2 260 30 240 167 0 0 chr20 16402031 16402079 -50265926 + GA-rich Low_complexity Low_complexity 3 50 0 997 236 41 70 chr20 16402347 16402747 -50265258 + MLT1B LTR MaLR 1 465 -2 188 307 88 35 chr20 16403434 16403548 -50264457 + L2 LINE L2 3145 3264 -8 279 0 0 0 chr20 16404008 16404039 -50263966 + (CA)n Simple_repeat Simple_repeat 1 31 0 234 0 0 0 chr20 16404179 16404205 -50263800 + (CA)n Simple_repeat Simple_repeat 2 27 0 818 165 45 5 chr20 16404401 16404601 -50263404 + L1MA7 LINE L1 6082 6289 -2 352 242 54 72 chr20 16404654 16404877 -50263128 + L1ME3A LINE L1 5948 6166 -4 444 367 33 60 chr20 16405366 16405734 -50262271 - L2 LINE L2 -4 3268 2911 3166 150 51 33 chr20 16405772 16406379 -50261626 - LTR35 LTR ERV1 0 618 1 465 235 110 71 chr20 16406439 16406694 -50261311 + LTR16A1 LTR ERVL 3 267 -190 2433 50 0 0 chr20 16406997 16407323 -50260682 + AluY SINE Alu 1 326 0 982 282 95 52 chr20 16407546 16408061 -50259944 - MLT1H LTR MaLR 0 549 13 2923 177 19 14 chr20 16408785 16409377 -50258628 + LTR49 LTR ERV1 1 595 0 239 325 38 0 chr20 16409493 16409573 -50258432 + MIR SINE MIR 107 189 -73 651 186 105 0 chr20 16409586 16409710 -50258295 + FAM SINE Alu 28 164 -21 3492 206 92 5 chr20 16409934 16410710 -50257295 - MER21B LTR ERV1 -1 862 20 1848 152 33 3 chr20 16410724 16411053 -50256952 + MER2 DNA MER2_type 7 345 0 210 300 0 0 chr20 16411086 16411136 -50256869 - MIR SINE MIR -41 221 172 3497 169 15 7 chr20 16411299 16411913 -50256092 - LTR31 LTR ERV1 0 619 1 1294 220 7 17 chr20 16411964 16412260 -50255745 - LTR51 LTR ERV1 -154 517 225 180 169 119 51 chr20 16412518 16412577 -50255428 - MIR SINE MIR -97 165 103 1675 193 0 7 chr20 16412842 16413143 -50254862 - AluJb SINE Alu -13 299 1 780 254 53 13 chr20 16413936 16414164 -50253841 + LTR16A1 LTR ERVL 221 457 0 184 309 32 21 chr20 16414164 16414258 -50253747 - MIR SINE MIR -117 145 51 2245 257 77 26 chr20 16414417 16415373 -50252632 + L2 LINE L2 2299 3308 -5 235 281 0 0 chr20 16415530 16415587 -50252418 + (CA)n Simple_repeat Simple_repeat 2 58 0 259 261 65 0 chr20 16417495 16417587 -50250418 - L2 LINE L2 0 3313 3216 874 273 112 44 chr20 16417587 16418009 -50249996 - LTR16C LTR ERVL 0 491 34 1942 173 57 37 chr20 16418009 16418467 -50249538 - MLT1C LTR MaLR 0 467 1 874 273 112 44 chr20 16418467 16418499 -50249506 - LTR16C LTR ERVL -457 34 6 1758 137 20 51 chr20 16418535 16418841 -50249164 + MER1B DNA MER1_type 1 296 -2416 3069 145 68 45 chr20 16418841 16419461 -50248544 + MER51A LTR ERV1 1 634 0 1758 137 20 51 chr20 16419461 16419504 -50248501 + MER1B DNA MER1_type 296 339 0 723 260 20 10 chr20 16419831 16420035 -50247970 + LTR16C LTR ERVL 239 444 -47 2181 139 0 0 chr20 16420391 16420701 -50247304 + AluSx SINE Alu 1 310 -2 620 72 0 0 chr20 16421093 16421176 -50246829 + AluY SINE Alu 1 83 -235 1182 156 33 5 chr20 16421384 16421595 -50246410 - MSTB LTR MaLR 0 426 210 402 342 88 9 chr20 16422226 16422454 -50245551 + L1ME LINE L1 230 475 -5595 614 266 70 56 chr20 16422458 16422943 -50245062 + L1ME LINE L1 383 874 -5196 2256 240 83 96 chr20 16422947 16423066 -50244939 + L1ME LINE L1 2395 2514 -3566 1463 363 118 0 chr20 16423066 16423449 -50244556 - MSTA LTR MaLR 0 428 1 2256 240 83 96 chr20 16423449 16423599 -50244406 + L1ME LINE L1 2514 2664 -3416 2200 130 40 8 chr20 16423599 16423952 -50244053 + THE1B LTR MaLR 1 364 0 2256 240 83 96 chr20 16423952 16425104 -50242901 + L1ME LINE L1 2664 3799 -2281 1278 218 45 51 chr20 16425098 16425674 -50242331 + L1ME LINE L1 4960 5520 -580 * 380 164 16 0 chr20 16475674 16475735 -50192270 - AluS SINE Alu -241 62 1 25 0 0 0 chr20 16475741 16475766 -50192239 + AT_rich Low_complexity Low_complexity 1 25 0 414 332 102 11 chr20 16476668 16476855 -50191150 - MLT1H LTR MaLR -323 226 23 859 364 99 28 chr20 16476876 16477675 -50190330 + L2 LINE L2 1944 2799 -515 238 312 28 18 chr20 16477710 16477819 -50190186 - LTR16C LTR ERVL -1 490 381 295 401 8 8 chr20 16478255 16478387 -50189618 + L2 LINE L2 3134 3265 -7 516 313 156 34 chr20 16481006 16481533 -50186472 + L2 LINE L2 2727 3309 -4 1880 134 89 17 chr20 16481724 16482074 -50185931 + THE1C LTR MaLR 1 375 0 219 343 66 55 chr20 16485666 16485955 -50182050 + L2 LINE L2 1678 1969 -1345 1857 172 0 0 chr20 16487624 16487937 -50180068 + AluSx SINE Alu 1 313 0 225 280 0 0 chr20 16488111 16488186 -50179819 + L1MD3 LINE L1 7911 7985 -10 687 328 122 45 chr20 16488355 16488864 -50179141 - L2 LINE L2 -552 2762 2215 441 289 143 22 chr20 16489017 16489429 -50178576 + LTR33 LTR ERVL 44 505 -16 187 278 0 125 chr20 16490579 16490651 -50177354 - MIR3 SINE MIR -8 200 138 821 160 0 0 chr20 16492023 16492142 -50175863 + FLAM_C SINE Alu 1 119 -24 286 297 50 0 chr20 16492492 16492593 -50175412 + MIR SINE MIR 49 154 -108 5406 59 3 0 chr20 16492630 16493313 -50174692 - L1PA7 LINE L1 -13 6141 5457 665 189 0 39 chr20 16493468 16493595 -50174410 - FLAM_C SINE Alu -21 122 1 1139 161 0 5 chr20 16493595 16493781 -50174224 - AluSg/x SINE Alu -14 298 114 271 259 63 60 chr20 16494845 16495243 -50172762 + L1ME4a LINE L1 5705 6103 -18 756 256 37 67 chr20 16495598 16495868 -50172137 - MIR SINE MIR 0 262 1 1561 209 154 19 chr20 16495891 16496317 -50171688 + MLT2B1 LTR ERVL 1 547 -7 243 0 0 0 chr20 16496621 16496648 -50171357 + (CA)n Simple_repeat Simple_repeat 2 28 0 276 30 0 0 chr20 16496714 16496747 -50171258 + (CA)n Simple_repeat Simple_repeat 2 34 0 288 154 0 0 chr20 16496756 16496808 -50171197 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 201 267 12 23 chr20 16497159 16497245 -50170760 + CT-rich Low_complexity Low_complexity 4 88 0 2175 133 19 27 chr20 16497291 16497658 -50170347 - THE1B LTR MaLR 0 364 1 336 256 185 38 chr20 16497827 16498038 -50169967 - MLT1J LTR MaLR -30 481 240 275 262 12 0 chr20 16498235 16498319 -50169686 - MLT1J LTR MaLR 0 567 483 1183 142 40 32 chr20 16498326 16498573 -50169432 - L1MA9 LINE L1 -282 6030 5782 459 120 27 0 chr20 16498732 16498807 -50169198 - MLT1B LTR MaLR 0 390 314 2283 179 24 7 chr20 16500238 16500657 -50167348 - MSTB LTR MaLR 0 426 1 286 288 42 34 chr20 16501316 16501434 -50166571 + MIR SINE MIR 118 236 -26 1404 244 142 19 chr20 16501668 16502237 -50165768 - L1ME3A LINE L1 -1 6169 5531 240 268 24 37 chr20 16503065 16503147 -50164858 - MIR SINE MIR -147 115 35 238 333 137 24 chr20 16503783 16503951 -50164054 - MIR3 SINE MIR -6 202 16 548 276 54 63 chr20 16504894 16505057 -50162948 - MIR SINE MIR -26 236 74 608 244 8 0 chr20 16505057 16505188 -50162817 + FLAM_A SINE Alu 2 133 0 548 276 54 63 chr20 16505188 16505245 -50162760 - MIR SINE MIR -188 74 18 2306 87 3 0 chr20 16505257 16505556 -50162449 + AluSp SINE Alu 1 300 -13 1656 169 46 9 chr20 16505887 16506237 -50161768 - L1MA6 LINE L1 0 6300 5938 2308 116 7 0 chr20 16506890 16507200 -50160805 - AluSx SINE Alu 0 312 1 879 244 23 30 chr20 16507543 16507809 -50160196 + LTR16A LTR ERVL 167 430 -20 1241 293 51 33 chr20 16508594 16509048 -50158957 - LTR16C LTR ERVL -1 490 29 282 321 117 88 chr20 16509191 16509602 -50158403 + L2 LINE L2 2850 3272 0 276 111 0 0 chr20 16510141 16510186 -50157819 + (CA)n Simple_repeat Simple_repeat 2 46 0 443 216 48 106 chr20 16510705 16510913 -50157092 - MLT1J LTR MaLR -101 410 215 333 47 0 0 chr20 16511171 16511214 -50156791 + (GA)n Simple_repeat Simple_repeat 2 44 0 1748 161 24 10 chr20 16513279 16513577 -50154428 + AluJb SINE Alu 1 302 -10 2376 98 0 0 chr20 16513740 16514045 -50153960 - AluSx SINE Alu -7 305 1 2370 109 0 0 chr20 16514439 16514752 -50153253 - AluSq SINE Alu 0 313 1 231 323 121 40 chr20 16516445 16516569 -50151436 + MIR3 SINE MIR 39 172 -36 29 0 0 0 chr20 16516808 16516837 -50151168 + AT_rich Low_complexity Low_complexity 1 29 0 286 306 37 28 chr20 16517954 16518043 -50149962 - L2 LINE L2 -2 3270 3181 215 367 85 15 chr20 16518043 16518242 -50149763 + MIR SINE MIR 1 213 -49 301 295 54 0 chr20 16518472 16518601 -50149404 - LTR33A LTR ERVL 0 523 388 322 212 230 0 chr20 16518897 16519062 -50148943 - LTR50 LTR ERVL -592 203 1 1225 319 119 35 chr20 16519686 16521001 -50147004 - L2 LINE L2 -1 3312 1875 1031 308 97 58 chr20 16521842 16522839 -50145166 + L2 LINE L2 2252 3302 -11 213 39 0 0 chr20 16522840 16522866 -50145139 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 246 266 13 25 chr20 16526686 16526765 -50141240 + MIR3 SINE MIR 128 205 -3 26 50 0 0 chr20 16527556 16527596 -50140409 + AT_rich Low_complexity Low_complexity 1 40 0 354 45 0 0 chr20 16527737 16527781 -50140224 + (CA)n Simple_repeat Simple_repeat 1 44 0 2237 125 0 0 chr20 16528452 16528757 -50139248 - AluSx SINE Alu -7 305 1 23 0 0 0 chr20 16529168 16529191 -50138814 + AT_rich Low_complexity Low_complexity 1 23 0 246 81 0 0 chr20 16529833 16529870 -50138135 + (TG)n Simple_repeat Simple_repeat 1 37 0 * 255 31 0 0 chr20 16529869 16529901 -50138104 + (GA)n Simple_repeat Simple_repeat 1 32 0 479 289 18 0 chr20 16530544 16530658 -50137347 - MIR SINE MIR -141 121 6 552 271 181 0 chr20 16530872 16531049 -50136956 + MIR SINE MIR 54 262 0 29753 108 14 56 chr20 16531139 16537556 -50130449 + L1PA7 LINE L1 13 6151 -3 1933 201 53 0 chr20 16537649 16538028 -50129977 - MER21B LTR ERV1 -1 862 464 23 33 0 0 chr20 16538123 16538153 -50129852 + AT_rich Low_complexity Low_complexity 1 30 0 2786 78 5 32 chr20 16538155 16538567 -50129438 - L1PA10 LINE L1 0 6168 5768 2457 189 4 62 chr20 16538568 16539065 -50128940 - MER21B LTR ERV1 -391 472 5 282 310 75 27 chr20 16539626 16539813 -50128192 - L2 LINE L2 -2 3311 3116 321 26 0 0 chr20 16539898 16539936 -50128069 + (TGAA)n Simple_repeat Simple_repeat 1 38 0 26 30 0 0 chr20 16540740 16540773 -50127232 + AT_rich Low_complexity Low_complexity 1 33 0 573 278 80 60 chr20 16542573 16542993 -50125012 - LTR16C LTR ERVL 0 491 1 234 0 0 0 chr20 16543802 16543828 -50124177 + (T)n Simple_repeat Simple_repeat 1 26 0 267 213 27 40 chr20 16543883 16543958 -50124047 - MIR SINE MIR -110 152 79 2151 128 3 6 chr20 16543959 16544272 -50123733 + AluSx SINE Alu 1 312 0 467 306 141 51 chr20 16544403 16544851 -50123154 - L2 LINE L2 0 3313 2826 301 259 17 43 chr20 16545283 16545399 -50122606 + L1ME4a LINE L1 5997 6109 -12 693 203 7 46 chr20 16546370 16546523 -50121482 - MER5B DNA MER1_type -26 152 6 916 265 79 71 chr20 16548302 16548749 -50119256 - MLT1J LTR MaLR 0 511 58 237 33 0 0 chr20 16548749 16548779 -50119226 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 916 265 79 71 chr20 16548779 16548837 -50119168 - MLT1J LTR MaLR -453 58 2 903 269 148 43 chr20 16549317 16549803 -50118202 - MLT1G1 LTR MaLR -5 588 1 194 170 0 64 chr20 16549820 16549867 -50118138 - L2 LINE L2 -12 3301 3258 184 329 0 14 chr20 16549897 16549970 -50118035 - MIR SINE MIR -110 152 81 21 57 0 0 chr20 16552960 16552995 -50115010 + AT_rich Low_complexity Low_complexity 1 35 0 489 301 59 70 chr20 16553435 16553691 -50114314 - L2 LINE L2 0 3272 3020 833 134 28 7 chr20 16553955 16554097 -50113908 - L1PA10 LINE L1 -54 6114 5970 2205 70 0 4 chr20 16554105 16554378 -50113627 - AluY SINE Alu -11 300 29 24 0 0 0 chr20 16555889 16555913 -50112092 + AT_rich Low_complexity Low_complexity 1 24 0 273 346 0 0 chr20 16556113 16556191 -50111814 + L2 LINE L2 3236 3313 0 2448 77 0 3 chr20 16556473 16556784 -50111221 + AluSq SINE Alu 1 310 -3 1758 55 0 9 chr20 16557011 16557231 -50110774 - AluY SINE Alu -4 307 90 749 300 34 69 chr20 16557697 16557948 -50110057 - LTR16C LTR ERVL -2 489 256 908 229 35 0 chr20 16557948 16558149 -50109856 + MER3 DNA MER1_type 2 209 0 749 300 34 69 chr20 16558149 16558304 -50109701 - LTR16C LTR ERVL -235 256 97 22 35 0 0 chr20 16558950 16558979 -50109026 + AT_rich Low_complexity Low_complexity 1 29 0 346 191 7 28 chr20 16559820 16559961 -50108044 + (TA)n Simple_repeat Simple_repeat 2 139 0 284 209 128 40 chr20 16561127 16561275 -50106730 + MER103 DNA DNA 4 164 -2 297 0 0 0 chr20 16562917 16562950 -50105055 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 2269 112 0 0 chr20 16565010 16565314 -50102691 - AluSq SINE Alu -9 304 1 762 161 0 31 chr20 16565381 16565511 -50102494 - FLAM_C SINE Alu -15 128 3 23 54 0 0 chr20 16566020 16566057 -50101948 + AT_rich Low_complexity Low_complexity 1 37 0 1505 197 54 39 chr20 16566925 16566997 -50101008 - MSTD LTR MaLR 0 396 327 213 39 0 0 chr20 16566997 16567023 -50100982 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 1505 197 54 39 chr20 16567023 16567340 -50100665 - MSTD LTR MaLR -69 327 1 380 181 56 49 chr20 16568275 16568419 -50099586 + Charlie7 DNA MER1_type 2440 2584 -28 2021 119 0 11 chr20 16569233 16569519 -50098486 + AluSx SINE Alu 26 308 -4 192 333 46 46 chr20 16570170 16570257 -50097748 + L2 LINE L2 3139 3225 -47 1494 96 9 37 chr20 16571199 16571417 -50096588 - AluSg/x SINE Alu -16 294 83 2378 76 0 0 chr20 16571502 16571793 -50096212 - AluY SINE Alu -20 291 1 180 0 0 0 chr20 16572462 16572482 -50095523 + (T)n Simple_repeat Simple_repeat 1 20 0 241 239 104 0 chr20 16573566 16573633 -50094372 + MER3 DNA MER1_type 41 114 -95 21 36 0 0 chr20 16573731 16573759 -50094246 + AT_rich Low_complexity Low_complexity 1 28 0 419 184 75 134 chr20 16573862 16574063 -50093942 - MER117 DNA MER1_type 0 197 9 247 164 0 36 chr20 16574149 16574204 -50093801 - HsTC2 DNA Tc2 -1843 55 3 2147 110 3 3 chr20 16574475 16574765 -50093240 + AluSx SINE Alu 1 290 -22 21 0 0 0 chr20 16576018 16576039 -50091966 + AT_rich Low_complexity Low_complexity 1 21 0 216 272 0 62 chr20 16576511 16576592 -50091413 - L2 LINE L2 -5 3267 3192 289 248 256 16 chr20 16576730 16576851 -50091154 - MIR SINE MIR -70 192 43 308 325 54 63 chr20 16576985 16577489 -50090516 - L2 LINE L2 -1079 2235 1737 363 23 0 0 chr20 16578133 16578177 -50089828 + (TG)n Simple_repeat Simple_repeat 2 45 0 270 0 0 0 chr20 16578784 16578814 -50089191 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 314 193 83 37 chr20 16579639 16579711 -50088294 - MER69 DNA AcHobo 0 2526 2446 2445 68 0 0 chr20 16579711 16580007 -50087998 + AluY SINE Alu 1 296 -15 314 193 83 37 chr20 16580007 16580043 -50087962 - MER69 DNA AcHobo -80 2446 2413 908 232 53 16 chr20 16580043 16580289 -50087716 - MER69 DNA AcHobo -340 2186 1932 710 193 44 0 chr20 16580300 16580435 -50087570 - MER69 DNA AcHobo -2385 141 1 270 0 0 0 chr20 16580574 16580604 -50087401 + (T)n Simple_repeat Simple_repeat 1 30 0 22 35 0 0 chr20 16581199 16581228 -50086777 + AT_rich Low_complexity Low_complexity 1 29 0 466 294 150 0 chr20 16581589 16581749 -50086256 - MER5A DNA MER1_type -2 187 4 2272 78 0 0 chr20 16582782 16583097 -50084908 - AluSq SINE Alu 0 315 1 606 259 14 0 chr20 16583718 16583865 -50084140 + MIR SINE MIR 48 196 -66 1402 99 9 24 chr20 16583999 16584212 -50083793 + L1PB2 LINE L1 5939 6148 -3 188 238 0 0 chr20 16584231 16584273 -50083732 + MIR SINE MIR 217 258 -4 323 200 40 13 chr20 16584360 16584435 -50083570 + MIR SINE MIR 186 262 0 303 261 168 25 chr20 16584848 16584967 -50083038 - MIR3 SINE MIR -14 194 59 567 273 52 32 chr20 16586037 16586294 -50081711 - LTR33 LTR ERVL -10 513 250 274 233 123 14 chr20 16586294 16586367 -50081638 - MER5B DNA MER1_type -14 164 84 338 267 187 6 chr20 16586451 16586596 -50081409 - LTR33A LTR ERVL -344 177 40 1028 100 3 11 chr20 16586944 16587304 -50080701 + (TA)n Simple_repeat Simple_repeat 1 357 0 36 0 0 0 chr20 16587304 16587340 -50080665 + AT_rich Low_complexity Low_complexity 1 36 0 1092 89 0 0 chr20 16587340 16587693 -50080312 + (TA)n Simple_repeat Simple_repeat 1 353 0 711 258 45 6 chr20 16588662 16588840 -50079165 - MIR SINE MIR -31 231 47 198 250 0 0 chr20 16588926 16588970 -50079035 - MER5A DNA MER1_type -110 79 36 953 216 192 46 chr20 16590016 16590469 -50077536 + LTR33A LTR ERVL 2 520 -3 205 161 0 0 chr20 16591075 16591106 -50076899 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 1697 171 79 10 chr20 16593150 16593442 -50074563 - AluJo SINE Alu 0 312 1 650 195 15 103 chr20 16593913 16594108 -50073897 - MER45A DNA AcHobo 0 178 1 521 291 29 12 chr20 16594754 16594926 -50073079 - MLT1J1 LTR MaLR -2 444 270 5962 101 3 3 chr20 16594926 16596023 -50071982 - L1PA13 LINE L1 -5 6158 5055 5296 202 8 5 chr20 16596023 16597170 -50070835 + L1P LINE L1 1514 2663 -3483 723 300 69 4 chr20 16597170 16597430 -50070575 - MLT1J1 LTR MaLR -169 277 1 360 293 51 32 chr20 16597507 16597664 -50070341 + MIR SINE MIR 77 236 -26 1942 146 27 40 chr20 16597715 16598091 -50069914 - THE1C LTR MaLR -4 371 1 203 297 27 0 chr20 16598122 16598196 -50069809 + MIR SINE MIR 186 261 -1 2203 121 13 0 chr20 16598557 16598863 -50069142 + AluSq SINE Alu 1 310 -3 21 0 0 0 chr20 16599169 16599190 -50068815 + AT_rich Low_complexity Low_complexity 1 21 0 330 26 0 0 chr20 16599262 16599301 -50068704 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 2084 130 0 0 chr20 16599648 16599981 -50068024 - AluSx SINE Alu 0 333 1 2113 109 0 27 chr20 16600077 16600371 -50067634 + AluSg SINE Alu 1 286 -24 7396 221 14 0 chr20 16600475 16602627 -50065378 - L1PA16 LINE L1 -9 6157 3944 216 0 0 0 chr20 16602627 16602651 -50065354 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7396 221 14 0 chr20 16602651 16603015 -50064990 - L1PA16 LINE L1 -2222 3944 3587 320 255 90 48 chr20 16606363 16606508 -50061497 + MIR SINE MIR 79 229 -33 487 291 6 63 chr20 16606918 16607093 -50060912 - MIR SINE MIR -56 206 42 219 325 49 57 chr20 16607103 16607226 -50060779 + L2 LINE L2 3146 3267 -5 891 237 289 13 chr20 16609184 16609568 -50058437 - MLT1G1 LTR MaLR -2 593 104 1730 141 116 66 chr20 16609572 16610085 -50057920 + MER4B LTR ERV1 1 872 0 268 146 42 0 chr20 16610085 16610132 -50057873 - MLT1G1 LTR MaLR -527 63 15 298 337 156 22 chr20 16610369 16610639 -50057366 + L2 LINE L2 2539 2844 -470 1625 286 19 21 chr20 16610854 16611480 -50056525 - L2 LINE L2 0 3313 2693 262 298 38 46 chr20 16611559 16611690 -50056315 + L2 LINE L2 3184 3313 0 1701 152 47 17 chr20 16612368 16612664 -50055341 - AluJb SINE Alu -7 305 1 22 0 0 0 chr20 16613562 16613584 -50054421 + AT_rich Low_complexity Low_complexity 1 22 0 2080 272 103 81 chr20 16614167 16615462 -50052543 - L2 LINE L2 -1 3312 1987 1520 191 61 3 chr20 16615462 16615755 -50052250 + AluJo SINE Alu 1 310 -2 2080 272 103 81 chr20 16615755 16615904 -50052101 - L2 LINE L2 -1326 1987 1843 781 142 13 13 chr20 16615915 16616070 -50051935 + CT-rich Low_complexity Low_complexity 3 157 0 261 392 33 20 chr20 16616400 16616553 -50051452 + L2 LINE L2 3107 3261 -11 271 319 51 13 chr20 16616933 16617168 -50050837 - L1ME LINE L1 -246 5875 5632 2023 103 46 11 chr20 16617171 16617452 -50050553 + AluSx SINE Alu 6 296 -16 3482 161 40 23 chr20 16617500 16617701 -50050304 - L1MB2 LINE L1 -2 6169 5973 1678 158 0 0 chr20 16617701 16617955 -50050050 - AluJb SINE Alu -58 254 1 3482 161 40 23 chr20 16617955 16618461 -50049544 - L1MB2 LINE L1 -198 5973 5450 348 307 18 25 chr20 16618580 16618743 -50049262 - L1MB2 LINE L1 -736 5428 5267 1764 201 0 3 chr20 16618754 16619062 -50048943 - AluJb SINE Alu -5 307 1 2326 84 27 3 chr20 16619200 16619499 -50048506 - AluY SINE Alu -5 306 1 21 0 0 0 chr20 16620782 16620803 -50047202 + AT_rich Low_complexity Low_complexity 1 21 0 2359 93 0 7 chr20 16620991 16621301 -50046704 + AluSg SINE Alu 1 308 -2 21 36 0 0 chr20 16621892 16621920 -50046085 + AT_rich Low_complexity Low_complexity 1 28 0 22 35 0 0 chr20 16622404 16622433 -50045572 + AT_rich Low_complexity Low_complexity 1 29 0 1694 185 26 6 chr20 16622685 16623031 -50044974 - MLT1A1 LTR MaLR -12 353 1 24 0 0 0 chr20 16623082 16623106 -50044899 + AT_rich Low_complexity Low_complexity 1 24 0 1031 69 0 0 chr20 16623423 16623553 -50044452 + AluSg SINE Alu 1 130 -180 2171 195 31 7 chr20 16624257 16624713 -50043292 - MLT1C LTR MaLR 0 467 1 2552 256 22 16 chr20 16624922 16625854 -50042151 - L1M4 LINE L1 -2136 4010 3073 2406 92 3 9 chr20 16628002 16628317 -50039688 - AluSq SINE Alu 0 313 1 28 0 0 0 chr20 16628533 16628561 -50039444 + AT_rich Low_complexity Low_complexity 1 28 0 458 317 34 15 chr20 16628620 16629027 -50038978 - MLT1J1 LTR MaLR -1 445 4 640 321 28 14 chr20 16629580 16629798 -50038207 + MIR SINE MIR 25 245 -17 2144 111 0 0 chr20 16631188 16631468 -50036537 + AluSx SINE Alu 1 280 -32 195 42 0 0 chr20 16631471 16631495 -50036510 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 3026 163 6 4 chr20 16631955 16632440 -50035565 + MER66B LTR ERV1 1 486 0 2184 116 10 0 chr20 16633038 16633339 -50034666 + AluSx SINE Alu 1 304 -8 1994 128 3 33 chr20 16633349 16633654 -50034351 + AluSx SINE Alu 1 296 -16 183 314 98 20 chr20 16633684 16633786 -50034219 - L2 LINE L2 -635 2679 2570 269 292 157 0 chr20 16634417 16634506 -50033499 + MIR SINE MIR 43 145 -117 251 186 68 51 chr20 16635071 16635130 -50032875 - MIR3 SINE MIR -15 193 134 411 204 88 41 chr20 16635860 16636007 -50031998 + MER112 DNA MER1_type 17 170 -90 231 362 103 21 chr20 16636079 16636241 -50031764 + MER5A DNA MER1_type 4 175 -3 1520 204 27 10 chr20 16636355 16636649 -50031356 - AluJb SINE Alu -13 299 1 821 274 58 4 chr20 16636720 16636946 -50031059 - MIR SINE MIR -10 252 15 195 204 0 0 chr20 16638036 16638085 -50029920 + (TG)n Simple_repeat Simple_repeat 2 50 0 1859 171 0 0 chr20 16638381 16638667 -50029338 + AluJo SINE Alu 1 286 -26 24 53 0 0 chr20 16639633 16639671 -50028334 + AT_rich Low_complexity Low_complexity 1 38 0 401 259 43 0 chr20 16641391 16641507 -50026498 + MIR SINE MIR 57 177 -85 236 254 62 72 chr20 16641529 16641722 -50026283 + L1MC4 LINE L1 7844 8034 -8 296 330 90 15 chr20 16641724 16641924 -50026081 - MLT1J LTR MaLR -264 247 33 497 323 135 33 chr20 16642617 16642946 -50025059 - L2 LINE L2 -1223 2091 1797 1899 152 0 10 chr20 16642946 16643243 -50024762 - AluJb SINE Alu -9 303 10 497 323 135 33 chr20 16643243 16643485 -50024520 - L2 LINE L2 -1517 1797 1462 183 42 0 0 chr20 16643585 16643609 -50024396 + (T)n Simple_repeat Simple_repeat 1 24 0 456 358 39 13 chr20 16643642 16643871 -50024134 - L3 LINE CR1 -683 894 660 184 265 72 72 chr20 16647019 16647102 -50020903 + MIR SINE MIR 32 114 -94 1571 267 85 35 chr20 16648067 16648606 -50019399 + L2 LINE L2 1971 2536 -778 218 175 0 0 chr20 16648766 16648806 -50019199 + G-rich Low_complexity Low_complexity 1 40 0 1817 152 76 0 chr20 16649155 16649445 -50018560 + AluSx SINE Alu 1 312 0 235 349 12 12 chr20 16650917 16651003 -50017002 + MIR SINE MIR 28 113 -95 216 0 0 0 chr20 16651140 16651164 -50016841 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2291 86 7 7 chr20 16651244 16651536 -50016469 + AluSc SINE Alu 1 292 -17 298 316 118 15 chr20 16653437 16653573 -50014432 - MIR3 SINE MIR -21 187 38 2099 245 96 7 chr20 16654070 16654682 -50013323 - MER21B LTR ERV1 -54 809 143 2488 54 0 3 chr20 16654857 16655155 -50012850 + AluY SINE Alu 2 298 -13 460 366 61 0 chr20 16655399 16655612 -50012393 + MIR SINE MIR 22 247 -15 742 147 16 0 chr20 16655630 16655759 -50012246 + FLAM_C SINE Alu 3 133 0 26 34 0 51 chr20 16655796 16655855 -50012150 + AT_rich Low_complexity Low_complexity 1 56 0 795 174 0 0 chr20 16655860 16655981 -50012024 + FLAM_A SINE Alu 1 121 -12 289 341 68 0 chr20 16655993 16656081 -50011924 - L2 LINE L2 -19 3294 3201 1649 186 102 16 chr20 16656141 16656513 -50011492 - LTR32 LTR ERVL 0 471 68 1824 147 13 45 chr20 16656688 16657002 -50011003 + AluJo SINE Alu 1 304 -8 2190 125 0 7 chr20 16657536 16657841 -50010164 - AluSg SINE Alu -6 304 2 783 171 0 0 chr20 16658374 16658497 -50009508 + AluJ SINE Alu 1 123 -179 816 143 0 0 chr20 16658506 16658625 -50009380 + AluJ SINE Alu 183 301 -11 757 239 33 47 chr20 16658870 16659083 -50008922 - MIR SINE MIR -44 218 9 182 347 198 0 chr20 16659155 16659276 -50008729 - L3 LINE CR1 -425 1152 1008 2161 142 3 0 chr20 16659481 16659790 -50008215 + AluSx SINE Alu 1 310 -2 507 298 73 5 chr20 16659877 16660082 -50007923 - LTR33 LTR ERVL -302 219 1 273 57 0 0 chr20 16660102 16660137 -50007868 + (CA)n Simple_repeat Simple_repeat 1 35 0 296 276 13 0 chr20 16660227 16660303 -50007702 - L3 LINE CR1 -770 807 731 253 276 81 86 chr20 16660304 16660478 -50007527 + MER5B DNA MER1_type 1 173 -5 758 274 141 21 chr20 16660940 16661316 -50006689 - L2 LINE L2 -9 3304 2884 498 250 113 6 chr20 16661552 16661712 -50006293 - MER69A DNA AcHobo 0 177 1 227 313 27 41 chr20 16662159 16662306 -50005699 + G-rich Low_complexity Low_complexity 5 149 0 4292 163 16 29 chr20 16662546 16663435 -50004570 - L1MA4 LINE L1 -35 6447 5571 1793 155 0 0 chr20 16663475 16663739 -50004266 + AluSq SINE Alu 1 264 -49 234 0 0 0 chr20 16663744 16663770 -50004235 + (CAAAA)n Simple_repeat Simple_repeat 1 26 0 5446 193 22 50 chr20 16663852 16665091 -50002914 - L1MA4 LINE L1 -772 5556 4386 1000 167 0 98 chr20 16665091 16665325 -50002680 + AluJb SINE Alu 87 297 -15 5446 193 22 50 chr20 16665325 16666255 -50001750 - L1MA4 LINE L1 -1942 4386 3432 2587 164 18 0 chr20 16666254 16666710 -50001295 - L1MA4 LINE L1 -4862 466 3 * 1443 206 6 48 chr20 16666759 16667075 -50000930 - AluJb SINE Alu -9 303 1 513 179 45 0 chr20 16667308 16667442 -50000563 + CT-rich Low_complexity Low_complexity 3 142 0 21 0 0 0 chr20 16668401 16668422 -49999583 + AT_rich Low_complexity Low_complexity 1 21 0 325 267 15 59 chr20 16668987 16669122 -49998883 - L1ME1 LINE L1 -62 6104 5976 211 135 0 39 chr20 16669151 16669203 -49998802 + (GAA)n Simple_repeat Simple_repeat 2 51 0 236 237 52 101 chr20 16670006 16670083 -49997922 + Charlie8 DNA MER1_type 67 146 -1271 1512 124 146 25 chr20 16670083 16670357 -49997648 - AluSg1 SINE Alu -2 307 1 236 237 52 101 chr20 16670357 16670532 -49997473 + Charlie8 DNA MER1_type 146 1405 -12 2082 122 31 0 chr20 16670902 16671189 -49996816 + AluSq SINE Alu 1 296 -17 499 345 61 4 chr20 16672265 16672511 -49995494 + MIR SINE MIR 1 260 -2 782 190 103 17 chr20 16672546 16672720 -49995285 - MER5A DNA MER1_type 0 189 1 217 129 0 0 chr20 16674677 16674708 -49993297 - L2 LINE L2 -25 3247 3217 305 367 44 0 chr20 16674793 16674951 -49993054 - MIR SINE MIR -51 211 47 673 276 10 25 chr20 16676345 16676544 -49991461 + MER117 DNA MER1_type 1 196 -1 2347 77 3 10 chr20 16678269 16678581 -49989424 - AluY SINE Alu -1 310 1 188 275 25 62 chr20 16679355 16679435 -49988570 + MIR SINE MIR 67 143 -119 318 150 61 0 chr20 16679444 16679733 -49988272 + (TA)n Simple_repeat Simple_repeat 1 306 0 191 126 74 0 chr20 16679756 16679851 -49988154 + (TA)n Simple_repeat Simple_repeat 1 102 0 335 120 78 0 chr20 16679868 16680035 -49987970 + (TA)n Simple_repeat Simple_repeat 1 180 0 232 159 45 23 chr20 16680041 16680129 -49987876 + (TTATA)n Simple_repeat Simple_repeat 5 94 0 259 118 76 21 chr20 16680136 16680280 -49987725 + (TATAA)n Simple_repeat Simple_repeat 5 156 0 40 37 0 0 chr20 16680280 16680334 -49987671 + AT_rich Low_complexity Low_complexity 1 54 0 249 183 207 0 chr20 16681883 16681965 -49986040 + MER113 DNA MER1_type? 1 99 -422 232 67 0 0 chr20 16682080 16682110 -49985895 - U6 snRNA snRNA -77 30 1 404 268 46 0 chr20 16682519 16682672 -49985333 + MER117 DNA MER1_type 33 192 -5 284 29 0 0 chr20 16682939 16682974 -49985031 - MADE1 DNA Mariner 0 80 46 1072 169 27 0 chr20 16683725 16683909 -49984096 - MER5A DNA MER1_type 0 189 1 2168 112 7 0 chr20 16684110 16684406 -49983599 - AluSq SINE Alu -15 298 1 219 264 69 56 chr20 16684591 16684663 -49983342 + MER91C DNA MER1_type 36 108 -32 402 315 25 44 chr20 16686217 16686420 -49981585 - MIR3 SINE MIR -5 203 5 737 119 0 25 chr20 16686492 16686610 -49981395 - AluJb SINE Alu -3 309 195 350 135 0 0 chr20 16686636 16686688 -49981317 - AluJ/FLAM SINE Alu -245 57 6 732 194 14 33 chr20 16686742 16686953 -49981052 - L1MD3 LINE L1 -9 7986 7780 999 170 12 0 chr20 16686955 16687120 -49980885 - AluSg/x SINE Alu -11 299 133 545 203 58 7 chr20 16687142 16687280 -49980725 - L1MD3 LINE L1 -242 7753 7609 756 172 0 0 chr20 16687283 16687405 -49980600 - FRAM SINE Alu -20 156 35 205 49 0 49 chr20 16687412 16687453 -49980552 + (TA)n Simple_repeat Simple_repeat 1 39 0 339 65 0 0 chr20 16687487 16687533 -49980472 + (TC)n Simple_repeat Simple_repeat 2 47 0 311 196 22 29 chr20 16687610 16687748 -49980257 + CT-rich Low_complexity Low_complexity 1 137 0 2641 45 0 3 chr20 16689267 16689576 -49978429 + AluY SINE Alu 1 308 -3 2422 69 0 25 chr20 16690425 16690744 -49977261 - AluY SINE Alu 0 311 1 1128 249 72 25 chr20 16691247 16691287 -49976718 - L1ME3 LINE L1 -72 6090 6053 1633 182 0 0 chr20 16691287 16691551 -49976454 + AluJo SINE Alu 18 281 -31 1128 249 72 25 chr20 16691551 16691955 -49976050 - L1ME3 LINE L1 -109 6053 5625 496 199 73 52 chr20 16692000 16692156 -49975849 - L1ME3 LINE L1 -712 5458 5301 1896 99 102 7 chr20 16692156 16692440 -49975565 - AluSx SINE Alu -1 311 1 496 199 73 52 chr20 16692440 16692582 -49975423 - L1ME3 LINE L1 -869 5301 5164 263 296 28 37 chr20 16693388 16693496 -49974509 - MER5B DNA MER1_type -26 152 46 1042 164 16 6 chr20 16693558 16693741 -49974264 - MER5A DNA MER1_type -4 185 1 325 287 87 41 chr20 16694091 16694286 -49973719 + L1ME4a LINE L1 5872 6075 -46 369 0 0 0 chr20 16694338 16694379 -49973626 + (CA)n Simple_repeat Simple_repeat 2 42 0 1035 116 71 11 chr20 16694981 16695287 -49972718 - THE1C LTR MaLR 0 375 1 33 25 0 0 chr20 16695586 16695626 -49972379 + AT_rich Low_complexity Low_complexity 1 40 0 1070 224 143 0 chr20 16695655 16695892 -49972113 - AluSx SINE Alu -40 272 2 1249 130 87 154 chr20 16695972 16696342 -49971663 + MER2 DNA MER2_type 1 345 0 429 272 117 19 chr20 16696482 16696688 -49971317 - MLT1G1 LTR MaLR -9 533 308 * 2068 126 12 67 chr20 16696679 16697083 -49970922 - LTR9 LTR ERV1 -230 382 1 597 239 51 7 chr20 16697107 16697329 -49970676 - MLT1G1 LTR MaLR -314 235 8 207 160 40 20 chr20 16697336 16697386 -49970619 + CT-rich Low_complexity Low_complexity 1 51 0 227 318 151 0 chr20 16697977 16698103 -49969902 - MIR SINE MIR -50 212 68 2081 135 30 0 chr20 16698202 16698499 -49969506 - AluSx SINE Alu -6 306 1 223 316 73 52 chr20 16698687 16698823 -49969182 - L2 LINE L2 0 3272 3134 613 131 20 0 chr20 16699179 16699292 -49968713 - MSTC LTR MaLR -328 100 1 1044 153 4 121 chr20 16699942 16700190 -49967815 - MER20 DNA MER1_type 0 219 1 387 284 53 48 chr20 16700579 16700787 -49967218 - MIR SINE MIR -8 254 46 1545 235 58 29 chr20 16701135 16701616 -49966389 - MLT1D LTR MaLR -7 498 4 498 309 119 21 chr20 16701658 16701894 -49966111 + MIR SINE MIR 4 262 0 189 0 0 0 chr20 16702274 16702295 -49965710 + (T)n Simple_repeat Simple_repeat 1 21 0 351 0 0 0 chr20 16702439 16702478 -49965527 + (CA)n Simple_repeat Simple_repeat 2 40 0 520 229 60 18 chr20 16702512 16702678 -49965327 + MIR SINE MIR 76 248 -14 237 315 8 102 chr20 16703538 16703665 -49964340 + MIR3 SINE MIR 70 184 -24 417 35 87 17 chr20 16703826 16703941 -49964064 + (TA)n Simple_repeat Simple_repeat 1 123 0 1681 182 0 31 chr20 16703945 16704236 -49963769 - AluJo SINE Alu -30 282 1 339 356 31 19 chr20 16704778 16704938 -49963067 + MIR SINE MIR 20 181 -81 679 313 23 30 chr20 16704981 16705074 -49962931 - MIR SINE MIR 0 262 170 2243 162 40 38 chr20 16705074 16705501 -49962504 + MSTC LTR MaLR 1 428 0 679 313 23 30 chr20 16705501 16705669 -49962336 - MIR SINE MIR -92 170 3 359 356 94 36 chr20 16705771 16705998 -49962007 + L2 LINE L2 2477 2689 -583 441 54 0 0 chr20 16705998 16706054 -49961951 + (TG)n Simple_repeat Simple_repeat 2 57 0 359 356 94 36 chr20 16706054 16706378 -49961627 + L2 LINE L2 2689 3058 -214 282 244 0 0 chr20 16706386 16706468 -49961537 + (TG)n Simple_repeat Simple_repeat 2 83 0 2114 140 73 15 chr20 16706469 16706811 -49961194 + THE1B LTR MaLR 3 364 0 11914 94 1 1 chr20 16706811 16708389 -49959616 + THE1B-int LTR MaLR 1 1579 -1 2063 122 78 20 chr20 16708390 16708734 -49959271 + THE1B LTR MaLR 1 364 0 213 143 24 0 chr20 16709320 16709362 -49958643 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 193 27 81 27 chr20 16710728 16710765 -49957240 + T-rich Low_complexity Low_complexity 2 40 0 639 200 0 0 chr20 16710804 16710914 -49957091 - FLAM_C SINE Alu -32 111 2 256 253 11 32 chr20 16712047 16712142 -49955863 + MARNA DNA Mariner 170 262 -324 464 281 106 0 chr20 16712195 16712355 -49955650 + MIR SINE MIR 86 262 0 1989 137 27 0 chr20 16713058 16713351 -49954654 + AluSx SINE Alu 1 301 -11 22 0 0 0 chr20 16713807 16713829 -49954176 + AT_rich Low_complexity Low_complexity 1 22 0 33 43 0 0 chr20 16713859 16713906 -49954099 + AT_rich Low_complexity Low_complexity 1 47 0 3054 140 2 59 chr20 16714284 16714827 -49953178 - MER41E LTR ERV1 0 512 1 2428 93 0 0 chr20 16715478 16715788 -49952217 - AluSg SINE Alu 0 310 1 226 146 24 0 chr20 16716876 16716917 -49951088 + (TCCA)n Simple_repeat Simple_repeat 2 43 0 193 274 0 0 chr20 16716917 16716968 -49951037 - L2 LINE L2 0 3313 3263 222 318 0 35 chr20 16717750 16717835 -49950170 + L3b LINE CR1 1428 1509 -74 289 259 37 0 chr20 16719071 16719152 -49948853 + (CATA)n Simple_repeat Simple_repeat 3 86 0 409 279 74 35 chr20 16719266 16719495 -49948510 - LTR33 LTR ERVL -235 286 49 410 195 0 13 chr20 16719502 16719579 -49948426 + FLAM SINE Alu 54 129 -14 884 158 0 0 chr20 16719833 16719966 -49948039 + FLAM_C SINE Alu 1 133 0 775 188 0 0 chr20 16720370 16720508 -49947497 + FLAM_C SINE Alu 1 138 -5 21 0 0 0 chr20 16720508 16720529 -49947476 + AT_rich Low_complexity Low_complexity 1 21 0 686 248 88 8 chr20 16720622 16720985 -49947020 + L1M4 LINE L1 2799 3190 -2956 15943 137 115 36 chr20 16721400 16724353 -49943652 + L1M1 LINE L1 15 3232 -4333 1494 181 90 4 chr20 16724353 16724630 -49943375 + AluJo SINE Alu 1 301 -11 15943 137 115 36 chr20 16724630 16724813 -49943192 + L1M1 LINE L1 3232 3399 -4166 2875 13 0 0 chr20 16725318 16725636 -49942369 + AluYb8 SINE Alu 1 318 0 301 232 0 12 chr20 16725647 16725729 -49942276 + L1ME3A LINE L1 6073 6153 -17 25 51 0 0 chr20 16726482 16726521 -49941484 + AT_rich Low_complexity Low_complexity 1 39 0 1443 102 5 0 chr20 16726693 16726909 -49941096 - L1PB1 LINE L1 -2 6149 5933 345 47 0 0 chr20 16726922 16726965 -49941040 + (CA)n Simple_repeat Simple_repeat 1 43 0 3210 92 6 4 chr20 16726966 16727453 -49940552 - L1PB1 LINE L1 -372 5779 5292 272 261 0 0 chr20 16727597 16727666 -49940339 - Charlie8 DNA MER1_type -8 2409 2341 354 216 18 54 chr20 16727777 16727888 -49940117 - Charlie8 DNA MER1_type -2215 202 96 288 264 0 35 chr20 16728290 16728377 -49939628 - L2 LINE L2 -1 3312 3229 3135 171 42 23 chr20 16728508 16729199 -49938806 + LTR8A LTR ERV1 1 704 -23 369 0 0 0 chr20 16731118 16731159 -49936846 + (TG)n Simple_repeat Simple_repeat 2 42 0 2258 143 115 2 chr20 16731159 16731627 -49936378 + L1MA9 LINE L1 5788 6312 0 2456 85 0 0 chr20 16732059 16732366 -49935639 + AluY SINE Alu 1 307 -4 345 257 46 37 chr20 16732512 16732712 -49935293 - LTR33A LTR ERVL 0 523 353 182 347 13 0 chr20 16732919 16732994 -49935011 - L2 LINE L2 -2992 322 247 743 170 0 0 chr20 16733178 16733290 -49934715 + FLAM_C SINE Alu 4 115 -28 367 111 0 0 chr20 16733298 16733352 -49934653 - MLT1C LTR MaLR -379 88 35 23 0 0 0 chr20 16733357 16733380 -49934625 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr20 16734747 16734769 -49933236 + AT_rich Low_complexity Low_complexity 1 22 0 297 310 0 0 chr20 16736252 16736339 -49931666 + GA-rich Low_complexity Low_complexity 1 87 0 266 245 47 28 chr20 16736980 16737086 -49930919 + MLT1K LTR MaLR 470 577 -11 361 188 65 65 chr20 16738115 16738253 -49929752 + MLT1K LTR MaLR 158 295 -293 1502 251 60 10 chr20 16738383 16738782 -49929223 + LTR16A LTR ERVL 32 450 0 1386 162 8 8 chr20 16741374 16741609 -49926396 + MSTB LTR MaLR 1 235 -191 2754 104 3 0 chr20 16741609 16741963 -49926042 - THE1A LTR MaLR 0 355 1 12554 91 9 1 chr20 16741965 16743530 -49924475 - THE1A-int LTR MaLR -2 1578 1 324 98 0 20 chr20 16743530 16743581 -49924424 - MLT2A1 LTR ERVL 0 453 404 183 42 0 0 chr20 16743581 16743605 -49924400 + (GA)n Simple_repeat Simple_repeat 2 25 0 1624 85 32 24 chr20 16743610 16743857 -49924148 - MLT2A1 LTR ERVL -195 249 1 1100 172 25 10 chr20 16743857 16744050 -49923955 + MSTB LTR MaLR 231 426 0 1540 204 25 48 chr20 16744732 16745124 -49922881 - MER58D DNA MER1_type -3 383 1 582 102 0 51 chr20 16745451 16745510 -49922495 + L1MC2 LINE L1 5865 5919 -425 2115 168 12 9 chr20 16745510 16745856 -49922149 - MER7A DNA MER2_type 0 346 2 582 102 0 51 chr20 16745856 16745894 -49922111 + L1MC2 LINE L1 5919 5957 -387 244 308 0 11 chr20 16745903 16745994 -49922011 + L1MC4 LINE L1 6614 6703 -1339 296 284 17 0 chr20 16746009 16746125 -49921880 + (TATATG)n Simple_repeat Simple_repeat 3 120 0 287 384 0 0 chr20 16746125 16746237 -49921768 + (CATATA)n Simple_repeat Simple_repeat 1 112 0 280 259 15 30 chr20 16746263 16746398 -49921607 + (TATATG)n Simple_repeat Simple_repeat 2 134 0 268 217 22 43 chr20 16746424 16746516 -49921489 - L1MC4 LINE L1 -1339 6703 6614 751 119 0 0 chr20 16746535 16746636 -49921369 - U6 snRNA snRNA -6 101 1 1940 144 88 3 chr20 16746638 16746991 -49921014 + L1MC2 LINE L1 5953 6335 -9 799 191 35 6 chr20 16747655 16747828 -49920177 - L1MC2 LINE L1 -216 6128 5951 774 108 0 0 chr20 16747828 16747930 -49920075 + U6 snRNA snRNA 1 102 -5 198 103 0 0 chr20 16747936 16747965 -49920040 + (TA)n Simple_repeat Simple_repeat 1 29 0 248 133 89 0 chr20 16747965 16748010 -49919995 - L1MC2 LINE L1 -1829 5956 5908 2614 110 49 0 chr20 16748466 16748812 -49919193 - THE1B LTR MaLR -1 363 1 281 250 38 0 chr20 16748885 16748965 -49919040 + MIR SINE MIR 123 205 -57 217 294 118 17 chr20 16749173 16749292 -49918713 - MIR SINE MIR -13 249 119 305 156 0 16 chr20 16749319 16749383 -49918622 + GA-rich Low_complexity Low_complexity 1 63 0 22 35 0 0 chr20 16749500 16749529 -49918476 + AT_rich Low_complexity Low_complexity 1 29 0 35 0 0 0 chr20 16749575 16749610 -49918395 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr20 16750174 16750197 -49917808 + AT_rich Low_complexity Low_complexity 1 23 0 938 129 65 129 chr20 16750621 16750853 -49917152 - MER20 DNA MER1_type -1 218 2 44 0 0 0 chr20 16751467 16751511 -49916494 + AT_rich Low_complexity Low_complexity 1 44 0 374 298 107 8 chr20 16752407 16752508 -49915497 + MIR SINE MIR 32 148 -114 210 71 0 0 chr20 16752508 16752536 -49915469 + (TGG)n Simple_repeat Simple_repeat 3 30 0 374 298 107 8 chr20 16752536 16752555 -49915450 + MIR SINE MIR 148 164 -98 844 81 52 37 chr20 16752574 16752710 -49915295 + FLAM_C SINE Alu 6 143 0 1850 287 89 7 chr20 16752732 16753339 -49914666 - MER115 DNA AcHobo -4 689 33 189 318 0 30 chr20 16753390 16753456 -49914549 + MIR SINE MIR 199 262 0 * 472 344 63 63 chr20 16753451 16753896 -49914109 - L2 LINE L2 -21 3251 2807 271 301 38 60 chr20 16754150 16754283 -49913722 + L2 LINE L2 2954 3083 -189 875 208 67 11 chr20 16754354 16754532 -49913473 - MER5A DNA MER1_type -1 188 1 288 250 0 29 chr20 16754740 16754808 -49913197 + L2 LINE L2 3201 3266 -6 1764 119 36 0 chr20 16754825 16755076 -49912929 + AluSc SINE Alu 40 299 -10 487 304 58 0 chr20 16755102 16755240 -49912765 + LTR16C LTR ERVL 51 196 -295 687 169 99 63 chr20 16755240 16755382 -49912623 + AluJo SINE Alu 86 232 -80 524 270 37 12 chr20 16755386 16755602 -49912403 + LTR16C LTR ERVL 211 489 -2 303 28 0 0 chr20 16755629 16755665 -49912340 + (TAGA)n Simple_repeat Simple_repeat 4 39 0 7287 178 77 9 chr20 16755827 16757398 -49910607 - MER52A LTR ERV1 0 1755 1 3918 144 16 2 chr20 16757618 16758231 -49909774 + L1MB4 LINE L1 5559 6180 0 336 323 107 21 chr20 16759715 16760006 -49907999 - L1ME4a LINE L1 -224 5897 5582 1694 176 0 31 chr20 16760088 16760407 -49907598 + AluJb SINE Alu 1 309 -3 941 207 21 27 chr20 16761330 16761518 -49906487 + MER5A DNA MER1_type 3 189 0 46 99 0 0 chr20 16761850 16762001 -49906004 + AT_rich Low_complexity Low_complexity 1 151 0 267 225 156 104 chr20 16762685 16762803 -49905202 + MIR SINE MIR 42 173 -89 1477 149 20 8 chr20 16762803 16763058 -49904947 + L1MA6 LINE L1 6039 6296 -4 267 225 156 104 chr20 16763058 16763112 -49904893 + MIR SINE MIR 173 223 -39 2049 209 43 10 chr20 16763952 16764557 -49903448 - MER39 LTR ERV1 0 707 1 1712 76 0 0 chr20 16765098 16765309 -49902696 + AluY SINE Alu 89 299 -12 1636 142 50 43 chr20 16766434 16766716 -49901289 - AluJo SINE Alu -24 288 5 21 0 0 0 chr20 16766722 16766743 -49901262 + AT_rich Low_complexity Low_complexity 1 21 0 404 267 144 72 chr20 16768155 16768391 -49899614 + Charlie8 DNA MER1_type 24 276 -2141 2391 192 59 84 chr20 16768685 16769342 -49898663 - MER21B LTR ERV1 -222 641 1 642 253 42 21 chr20 16769431 16769621 -49898384 + LTR33 LTR ERVL 1 194 -327 554 274 60 0 chr20 16769670 16769838 -49898167 + LTR33 LTR ERVL 342 519 -2 21 0 0 0 chr20 16769867 16769888 -49898117 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr20 16770107 16770130 -49897875 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 225 0 0 0 chr20 16770696 16770721 -49897284 + (T)n Simple_repeat Simple_repeat 1 25 0 24 32 0 0 chr20 16771148 16771179 -49896826 + AT_rich Low_complexity Low_complexity 1 31 0 248 324 35 55 chr20 16772579 16772724 -49895281 + MLT1I LTR MaLR 2 143 -266 635 256 14 76 chr20 16772813 16772958 -49895047 + MLT1I LTR MaLR 201 329 -80 1834 145 3 56 chr20 16772958 16773282 -49894723 + AluSx SINE Alu 1 307 -5 635 256 14 76 chr20 16773282 16773359 -49894646 + MLT1I LTR MaLR 329 409 0 268 266 63 70 chr20 16773359 16773517 -49894488 + MIR SINE MIR 48 204 -58 340 215 0 0 chr20 16773571 16773636 -49894369 - U3 snRNA snRNA -152 65 1 200 196 0 20 chr20 16774256 16774307 -49893698 + GA-rich Low_complexity Low_complexity 6 55 0 359 281 76 22 chr20 16774320 16774505 -49893500 - Charlie8 DNA MER1_type -2145 272 78 2364 102 0 0 chr20 16774642 16774946 -49893059 + AluSx SINE Alu 1 304 -8 869 81 0 24 chr20 16775510 16775633 -49892372 - AluY SINE Alu -4 307 188 549 0 0 0 chr20 16776315 16776376 -49891629 + (TG)n Simple_repeat Simple_repeat 2 62 0 1458 230 3 13 chr20 16776409 16776722 -49891283 - MLT2C1 LTR ERVL -87 310 1 2202 94 7 13 chr20 16776729 16777027 -49890978 - AluSc SINE Alu -13 296 1 201 294 71 79 chr20 16777157 16777265 -49890740 + L2 LINE L2 3127 3235 -37 15922 139 18 5 chr20 16777265 16779652 -49888353 + Tigger1 DNA MER2_type 1 2418 0 201 294 71 79 chr20 16779652 16779669 -49888336 + L2 LINE L2 3235 3251 -21 1094 147 6 0 chr20 16779760 16779923 -49888082 - AluSg/x SINE Alu -12 300 137 2368 103 0 0 chr20 16779923 16780224 -49887781 - AluSq SINE Alu -10 303 3 288 299 51 36 chr20 16780301 16780438 -49887567 + MIR3 SINE MIR 36 174 -34 2312 80 31 0 chr20 16780774 16781063 -49886942 - AluSx SINE Alu -14 298 1 504 294 35 0 chr20 16781400 16781543 -49886462 + MLT1J LTR MaLR 96 243 -268 1039 153 27 6 chr20 16783368 16783551 -49884454 - MER53 DNA DNA 0 189 3 211 200 0 0 chr20 16783917 16783957 -49884048 + L2 LINE L2 3268 3307 -6 2072 117 47 3 chr20 16784092 16784391 -49883614 + AluSx SINE Alu 1 312 0 1418 237 73 7 chr20 16785151 16785632 -49882373 + MLT2E LTR ERVL 21 581 -47 972 258 42 18 chr20 16786250 16786595 -49881410 + LTR16C LTR ERVL 100 487 -4 764 209 37 27 chr20 16787235 16787422 -49880583 + MER53 DNA DNA 1 189 0 551 272 0 0 chr20 16787622 16787747 -49880258 - L2 LINE L2 0 3313 3189 257 316 10 41 chr20 16788951 16789049 -49878956 - MIR3 SINE MIR -46 162 68 2516 56 3 0 chr20 16790350 16790654 -49877351 + AluY SINE Alu 1 305 -6 256 223 70 96 chr20 16790843 16791000 -49877005 - MLT1G LTR MaLR -12 578 426 2339 95 0 13 chr20 16791094 16791410 -49876595 - AluSx SINE Alu 0 312 1 304 282 11 11 chr20 16791420 16791540 -49876465 - MLT1H LTR MaLR -237 172 57 2130 120 0 7 chr20 16791574 16791874 -49876131 + AluSx SINE Alu 1 298 -14 2153 116 0 0 chr20 16792299 16792626 -49875379 - AluSx SINE Alu 0 327 1 2255 168 68 2 chr20 16793386 16793786 -49874219 + MSTB LTR MaLR 1 426 0 8531 161 36 25 chr20 16793786 16795418 -49872587 + MSTB-int LTR MaLR 1 1651 0 2051 182 76 2 chr20 16795418 16795814 -49872191 + MSTB LTR MaLR 1 425 -1 270 291 162 0 chr20 16796336 16796453 -49871552 + L2 LINE L2 3122 3257 -15 1683 219 64 5 chr20 16797790 16798164 -49869841 + MSTD LTR MaLR 1 396 0 396 0 0 0 chr20 16798443 16798487 -49869518 + (CA)n Simple_repeat Simple_repeat 2 45 0 1753 172 30 56 chr20 16799091 16799789 -49868216 + MER21B LTR ERV1 89 845 -18 310 287 19 9 chr20 16800381 16800489 -49867516 - MLT1L LTR MaLR -25 590 482 309 265 15 61 chr20 16800633 16800765 -49867240 - MLT1L LTR MaLR -348 267 142 499 316 75 7 chr20 16801043 16801458 -49866547 - L1ME4a LINE L1 -136 5985 5543 224 155 0 17 chr20 16801814 16801872 -49866133 + (TGAA)n Simple_repeat Simple_repeat 3 59 0 1536 152 5 0 chr20 16803698 16803922 -49864083 - AluSq SINE Alu -88 225 1 2584 309 170 26 chr20 16803924 16805092 -49862913 + L2 LINE L2 333 1331 -1983 414 0 0 0 chr20 16805092 16805138 -49862867 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 2584 309 170 26 chr20 16805138 16805849 -49862156 + L2 LINE L2 1331 2483 -831 256 206 14 27 chr20 16805884 16805957 -49862048 + L2 LINE L2 2468 2539 -775 353 280 21 11 chr20 16805966 16806059 -49861946 + L2 LINE L2 3168 3261 -52 1288 207 103 10 chr20 16806062 16806362 -49861643 + MER58B DNA MER1_type 4 331 -10 476 350 75 59 chr20 16806409 16806663 -49861342 - MLT1K LTR MaLR -298 290 33 207 0 0 0 chr20 16807500 16807523 -49860482 + (T)n Simple_repeat Simple_repeat 1 23 0 693 237 47 24 chr20 16808135 16808304 -49859701 - MLT2E LTR ERVL -437 191 19 2145 114 7 7 chr20 16809036 16809344 -49858661 - AluSq SINE Alu -5 308 1 313 242 42 100 chr20 16809406 16809526 -49858479 + MLT1I LTR MaLR 278 390 -19 247 183 0 135 chr20 16809533 16809637 -49858368 + L1ME4a LINE L1 5975 6064 -57 3060 210 51 11 chr20 16809819 16810567 -49857438 + L1M4 LINE L1 4563 5342 -820 446 0 19 0 chr20 16810835 16810889 -49857116 + (CA)n Simple_repeat Simple_repeat 2 56 0 463 215 23 154 chr20 16810911 16811125 -49856880 + MER5A DNA MER1_type 4 189 0 295 322 81 31 chr20 16811669 16811882 -49856123 + MIR SINE MIR 20 241 -21 306 200 21 21 chr20 16812021 16812116 -49855889 + (TCTA)n Simple_repeat Simple_repeat 3 97 0 446 297 22 66 chr20 16812187 16812598 -49855407 + L1MC4a LINE L1 4645 5037 -1109 620 344 45 25 chr20 16812853 16813324 -49854681 + L1MC4a LINE L1 5352 5831 -1977 499 14 14 14 chr20 16813359 16813428 -49854577 + (TA)n Simple_repeat Simple_repeat 2 70 0 557 326 93 46 chr20 16815817 16816277 -49851728 + LTR16C LTR ERVL 8 489 -2 100 55 0 0 chr20 16817302 16817465 -49850540 + AT_rich Low_complexity Low_complexity 1 163 0 355 224 58 96 chr20 16818600 16818756 -49849249 + MER103 DNA DNA 16 165 -1 308 270 230 0 chr20 16818787 16818959 -49849046 - MIR SINE MIR -10 252 42 207 132 19 57 chr20 16819550 16819603 -49848402 + T-rich Low_complexity Low_complexity 2 52 0 340 266 23 39 chr20 16819864 16819992 -49848013 + MIR SINE MIR 20 145 -63 2556 65 3 0 chr20 16820041 16820351 -49847654 - AluY SINE Alu 0 311 1 2345 71 0 0 chr20 16820467 16820793 -49847212 - AluY SINE Alu 0 326 1 282 29 0 0 chr20 16820834 16820869 -49847136 + (TG)n Simple_repeat Simple_repeat 2 36 0 299 105 18 0 chr20 16821422 16821479 -49846526 + (TA)n Simple_repeat Simple_repeat 2 59 0 2019 146 0 13 chr20 16821480 16821782 -49846223 - AluSx SINE Alu -8 304 7 2262 116 0 0 chr20 16821785 16822086 -49845919 - AluSx SINE Alu -9 303 3 721 261 23 40 chr20 16823092 16823268 -49844737 + MER45A DNA AcHobo 6 178 0 389 350 118 24 chr20 16823559 16823848 -49844157 - L2 LINE L2 -38 3234 2919 1543 185 5 93 chr20 16824175 16824585 -49843420 + MLT1A2 LTR MaLR 1 374 0 1516 160 57 143 chr20 16824589 16825063 -49842942 + MLT1A2-int LTR MaLR 5 437 -934 752 126 0 25 chr20 16825067 16825186 -49842819 - FLAM_C SINE Alu 0 143 28 454 217 0 0 chr20 16825261 16825344 -49842661 + Tigger5 DNA MER2_type 2237 2319 -4 473 274 136 16 chr20 16827013 16827425 -49840580 + L1ME1 LINE L1 5188 5651 -511 415 242 116 56 chr20 16827478 16827693 -49840312 - MER112 DNA MER1_type -31 229 2 327 290 51 37 chr20 16827730 16827944 -49840061 + L1ME1 LINE L1 5706 5922 -244 23 33 0 0 chr20 16827982 16828012 -49839993 + AT_rich Low_complexity Low_complexity 1 30 0 336 239 316 0 chr20 16828125 16828242 -49839763 - MLT1L LTR MaLR -58 557 404 490 320 140 22 chr20 16828563 16828928 -49839077 - L2 LINE L2 -58 3255 2848 203 271 21 42 chr20 16828981 16829077 -49838928 - L2 LINE L2 -705 2609 2516 948 284 192 23 chr20 16830059 16830538 -49837467 - MLT1K LTR MaLR -10 578 19 238 316 149 0 chr20 16830739 16830853 -49837152 - MIR SINE MIR -52 210 80 819 192 9 58 chr20 16830857 16831081 -49836924 + L1MA7 LINE L1 6068 6280 -11 191 330 33 22 chr20 16831694 16831785 -49836220 + L2 LINE L2 3214 3305 -8 210 158 0 0 chr20 16832958 16832996 -49835009 + T-rich Low_complexity Low_complexity 1 38 0 528 241 135 55 chr20 16833020 16833257 -49834748 + MIR SINE MIR 2 257 -5 293 364 60 24 chr20 16833517 16833767 -49834238 + L2 LINE L2 2525 2783 -531 374 304 13 9 chr20 16833816 16833941 -49834064 - MIR SINE MIR -72 136 8 900 224 41 18 chr20 16833961 16834180 -49833825 + MER58A DNA MER1_type 1 224 0 619 249 29 17 chr20 16835880 16836053 -49831952 - MIR SINE MIR -3 259 85 2133 121 3 0 chr20 16836140 16836446 -49831559 - AluSg SINE Alu -3 307 1 262 342 145 20 chr20 16837443 16837595 -49830410 - MIR SINE MIR -74 188 18 1295 168 43 12 chr20 16837605 16837927 -49830078 - L1MB3 LINE L1 -10 6173 5862 336 24 0 0 chr20 16837927 16837968 -49830037 + (TG)n Simple_repeat Simple_repeat 2 42 0 1295 168 43 12 chr20 16837968 16838209 -49829796 - L1MB3 LINE L1 -321 5862 5544 333 0 0 0 chr20 16838740 16838777 -49829228 + (TG)n Simple_repeat Simple_repeat 1 37 0 1479 263 142 17 chr20 16839218 16839697 -49828308 + MLT1E LTR MaLR 55 593 0 303 248 20 30 chr20 16840039 16840140 -49827865 + LTR67 LTR ERVL 458 557 0 1667 163 33 20 chr20 16840199 16840500 -49827505 - AluJb SINE Alu -7 305 1 2288 171 4 42 chr20 16841148 16841337 -49826668 + Tigger2a DNA MER2_type 1 196 -2512 2145 110 0 10 chr20 16841337 16841628 -49826377 + AluSp SINE Alu 1 288 -25 2288 171 4 42 chr20 16841628 16841889 -49826116 + Tigger2a DNA MER2_type 196 434 0 2206 112 0 0 chr20 16843173 16843467 -49824538 - AluSc SINE Alu -15 294 1 247 264 0 0 chr20 16845238 16845291 -49822714 + (TG)n Simple_repeat Simple_repeat 1 53 0 2255 115 0 3 chr20 16846206 16846518 -49821487 + AluSq SINE Alu 1 311 -2 420 238 107 0 chr20 16847976 16848098 -49819907 - MER3 DNA MER1_type 0 209 75 290 345 74 19 chr20 16848090 16848344 -49819661 + MLT1K LTR MaLR 220 514 -101 1307 197 51 3 chr20 16848344 16848658 -49819347 + MER33 DNA MER1_type 1 321 -3 380 245 10 10 chr20 16848666 16848764 -49819241 + MLT1K LTR MaLR 490 587 -1 25 65 0 0 chr20 16849636 16849682 -49818323 + AT_rich Low_complexity Low_complexity 1 46 0 22 70 0 0 chr20 16850068 16850111 -49817894 + AT_rich Low_complexity Low_complexity 1 43 0 198 103 0 0 chr20 16850424 16850453 -49817552 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 339 218 35 0 chr20 16850563 16850650 -49817355 - MER97a DNA MER1_type? -16 878 789 3241 192 39 28 chr20 16850662 16851376 -49816629 - L1MB7 LINE L1 -17 6167 5446 1051 252 116 7 chr20 16851376 16851808 -49816197 - MER97c DNA MER1_type? -117 777 299 960 239 24 0 chr20 16851840 16852053 -49815952 - MER97b DNA MER1_type? -826 227 10 1670 242 69 63 chr20 16852335 16852873 -49815132 - MLT1F LTR MaLR 0 542 2 221 83 28 0 chr20 16855217 16855253 -49812752 + (TCCA)n Simple_repeat Simple_repeat 3 39 0 297 51 0 0 chr20 16856323 16856362 -49811643 + MADE1 DNA Mariner 42 80 0 257 267 82 7 chr20 16856468 16856614 -49811391 + HAL1b LINE L1 667 823 -525 319 350 58 39 chr20 16856923 16857334 -49810671 + L1ME LINE L1 2200 2618 -3528 229 320 89 0 chr20 16857463 16857666 -49810339 + L1ME LINE L1 2708 2928 -3218 248 348 97 22 chr20 16857731 16858050 -49809955 + L1ME LINE L1 4674 5016 -1130 344 279 35 75 chr20 16858578 16858779 -49809226 + L1ME LINE L1 5582 5774 -347 2317 67 13 0 chr20 16858882 16859181 -49808824 - AluY SINE Alu -8 303 1 541 56 0 0 chr20 16859218 16859289 -49808716 + Alu SINE Alu 1 71 -239 22080 26 5 0 chr20 16859289 16862699 -49805306 + L1PA3 LINE L1 2734 6155 0 245 237 34 0 chr20 16865126 16865185 -49802820 - MER94 DNA DNA 0 134 74 254 228 0 119 chr20 16865992 16866194 -49801811 + (CATATA)n Simple_repeat Simple_repeat 2 179 0 233 331 6 25 chr20 16866208 16866371 -49801634 + (CATATA)n Simple_repeat Simple_repeat 5 164 0 330 354 55 30 chr20 16867044 16867208 -49800797 + L2 LINE L2 3100 3267 -5 7188 45 6 6 chr20 16867491 16868570 -49799435 - L1PA5 LINE L1 -3 6151 5073 1448 87 41 27 chr20 16868826 16869045 -49798960 + MER30 DNA MER1_type 2 223 -7 23 0 0 0 chr20 16869101 16869124 -49798881 + AT_rich Low_complexity Low_complexity 1 23 0 570 180 40 0 chr20 16869128 16869228 -49798777 - AluJb SINE Alu -208 104 1 28 0 0 0 chr20 16869379 16869407 -49798598 + AT_rich Low_complexity Low_complexity 1 28 0 277 149 43 43 chr20 16869813 16869907 -49798098 + (CTATA)n Simple_repeat Simple_repeat 2 95 0 41 36 0 0 chr20 16870719 16870774 -49797231 + AT_rich Low_complexity Low_complexity 1 55 0 25 51 0 0 chr20 16870989 16871028 -49796977 + AT_rich Low_complexity Low_complexity 1 39 0 1998 74 282 6 chr20 16872671 16873022 -49794983 - LTR7 LTR ERV1 -2 448 1 2415 92 45 18 chr20 16873022 16873402 -49794603 - HERVH LTR ERV1 0 7713 7324 1279 148 17 38 chr20 16873402 16873639 -49794366 - HERVH LTR ERV1 -1894 5819 5588 * 4271 151 0 1 chr20 16873619 16874282 -49793723 - HERVH LTR ERV1 -2564 5149 4488 6294 82 1 2 chr20 16874284 16875139 -49792866 - HERVH LTR ERV1 -3720 3993 3140 * 20297 95 14 18 chr20 16875118 16878126 -49789879 - HERVH LTR ERV1 -4718 2995 1 1962 86 282 6 chr20 16878128 16878479 -49789526 - LTR7 LTR ERV1 -2 448 1 1130 243 43 27 chr20 16878573 16878902 -49789103 + L1ME3A LINE L1 5836 6169 -1 1661 203 25 11 chr20 16879451 16879811 -49788194 - MLT1A1 LTR MaLR 0 365 1 183 315 0 0 chr20 16879908 16879962 -49788043 + MIR SINE MIR 13 66 -196 386 320 99 60 chr20 16880298 16880701 -49787304 + L2 LINE L2 2811 3229 -43 1195 196 43 97 chr20 16882048 16882440 -49785565 - MLT1A2 LTR MaLR 0 374 4 841 278 241 3 chr20 16882630 16883000 -49785005 + LTR33 LTR ERVL 44 501 -20 241 280 13 0 chr20 16883238 16883313 -49784692 + (TAA)n Simple_repeat Simple_repeat 1 76 0 288 296 31 43 chr20 16883331 16883493 -49784512 - MIR SINE MIR -50 212 53 180 269 0 39 chr20 16884673 16884725 -49783280 - L2 LINE L2 -95 3218 3169 201 156 0 0 chr20 16884731 16884763 -49783242 + (CA)n Simple_repeat Simple_repeat 1 32 0 454 274 126 6 chr20 16886047 16886222 -49781783 + MIR SINE MIR 53 248 -14 31 26 0 0 chr20 16886301 16886339 -49781666 + AT_rich Low_complexity Low_complexity 1 38 0 212 130 22 0 chr20 16886342 16886388 -49781617 + (TATAA)n Simple_repeat Simple_repeat 2 48 0 527 278 132 110 chr20 16887060 16887651 -49780354 + L1MEd LINE L1 114 717 -5488 302 328 25 17 chr20 16887654 16887773 -49780232 + L1MEd LINE L1 1571 1690 -4706 310 267 45 102 chr20 16888136 16888312 -49779693 + L1MEd LINE L1 2181 2346 -4050 405 340 67 8 chr20 16888354 16888592 -49779413 + L1MEd LINE L1 2554 2805 -3410 548 243 107 63 chr20 16888592 16888798 -49779207 + MER58C DNA MER1_type 1 215 0 667 259 15 41 chr20 16888839 16889036 -49778969 - L2 LINE L2 -6 3307 3116 1207 189 112 40 chr20 16889087 16889409 -49778596 - MER2 DNA MER2_type 0 345 1 304 262 90 83 chr20 16889516 16889590 -49778415 + L1MEd LINE L1 3077 3149 -3066 1697 182 7 17 chr20 16889590 16889887 -49778118 + AluJo SINE Alu 1 294 -18 304 262 90 83 chr20 16889887 16890102 -49777903 + L1MEd LINE L1 3149 3368 -2847 2058 145 0 0 chr20 16890150 16890440 -49777565 + AluSx SINE Alu 1 290 -22 309 275 103 53 chr20 16890452 16890774 -49777231 + L1MEd LINE L1 3439 3778 -2437 22 56 0 0 chr20 16890779 16890815 -49777190 + AT_rich Low_complexity Low_complexity 1 36 0 1199 203 78 17 chr20 16890886 16891181 -49776824 + L1MB7 LINE L1 5809 6121 -63 1523 200 52 14 chr20 16891186 16891531 -49776474 + MLT1A1 LTR MaLR 6 363 -2 283 293 71 25 chr20 16891551 16891749 -49776256 + L1MEd LINE L1 3944 4150 -2065 336 112 118 33 chr20 16891813 16891965 -49776040 + (TTTAA)n Simple_repeat Simple_repeat 1 165 0 22 35 0 0 chr20 16891970 16891999 -49776006 + AT_rich Low_complexity Low_complexity 1 29 0 241 291 82 15 chr20 16892016 16892150 -49775855 + L1MEd LINE L1 4273 4415 -1800 329 324 35 52 chr20 16893157 16893330 -49774675 + MIR3 SINE MIR 5 174 -34 441 0 0 0 chr20 16893418 16893467 -49774538 + (TG)n Simple_repeat Simple_repeat 2 50 0 2857 146 6 14 chr20 16893508 16893677 -49774328 + L1MB3 LINE L1 5656 5825 -358 795 196 0 0 chr20 16893677 16893810 -49774195 + FLAM_A SINE Alu 1 133 0 2857 146 6 14 chr20 16893810 16894167 -49773838 + L1MB3 LINE L1 5825 6182 -1 591 274 110 13 chr20 16895202 16895718 -49772287 - MLT2E LTR ERVL 0 628 7 401 295 6 38 chr20 16896198 16896430 -49771575 + CT-rich Low_complexity Low_complexity 1 224 0 202 56 56 0 chr20 16896589 16896625 -49771380 + CT-rich Low_complexity Low_complexity 1 38 0 575 304 46 36 chr20 16896637 16896940 -49771065 + L2 LINE L2 3008 3313 0 200 97 32 0 chr20 16896940 16896971 -49771034 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1160 196 128 4 chr20 16897381 16897530 -49770475 - AluJo SINE Alu -3 299 170 215 77 0 26 chr20 16897530 16897569 -49770436 + (TTTTG)n Simple_repeat Simple_repeat 5 42 0 1160 196 128 4 chr20 16897569 16897684 -49770321 - AluJo SINE Alu -132 170 2 21 0 0 0 chr20 16897977 16897998 -49770007 + AT_rich Low_complexity Low_complexity 1 21 0 231 133 0 0 chr20 16898015 16898060 -49769945 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 56 0 0 chr20 16898100 16898136 -49769869 + AT_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr20 16899121 16899156 -49768849 + AT_rich Low_complexity Low_complexity 1 35 0 4349 18 0 2 chr20 16899352 16900027 -49767978 - L1PA3 LINE L1 -373 5782 5109 3337 31 0 0 chr20 16900027 16900416 -49767589 + L1PA3 LINE L1 5763 6153 -2 6614 176 109 27 chr20 16900707 16902250 -49765755 + MER52A LTR ERV1 1 1755 0 322 262 38 90 chr20 16903017 16903284 -49764721 - MLT1K LTR MaLR -5 583 331 243 281 73 24 chr20 16903397 16903479 -49764526 - MIR SINE MIR -153 109 24 483 224 83 26 chr20 16904081 16904237 -49763768 + L1ME3 LINE L1 5969 6133 -29 1833 164 38 53 chr20 16904824 16905220 -49762785 - MLT1B LTR MaLR 0 390 1 291 266 13 0 chr20 16905513 16905592 -49762413 + L2 LINE L2 2897 2976 -337 679 116 0 0 chr20 16905672 16905767 -49762238 - AluS SINE Alu -217 95 1 686 208 94 0 chr20 16906019 16906178 -49761827 + MER8 DNA MER2_type 1 174 -65 366 133 13 40 chr20 16906214 16906289 -49761716 - Tigger2a DNA MER2_type -361 73 1 1091 172 235 8 chr20 16908230 16908345 -49759660 + AluJo SINE Alu 2 90 -212 216 0 0 0 chr20 16908345 16908369 -49759636 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 1091 172 235 8 chr20 16908369 16908491 -49759514 + AluJo SINE Alu 90 293 -9 477 295 76 19 chr20 16909363 16909725 -49758280 - MLT1J2 LTR MaLR 0 450 43 182 367 133 0 chr20 16909814 16909942 -49758063 - L2 LINE L2 -1 3271 3127 25 51 0 0 chr20 16910573 16910612 -49757393 + AT_rich Low_complexity Low_complexity 1 39 0 278 344 99 0 chr20 16911404 16911535 -49756470 + L2 LINE L2 3161 3304 -9 1097 257 41 28 chr20 16911596 16912055 -49755950 + Charlie4a DNA MER1_type 12 476 -32 231 288 9 69 chr20 16912128 16912244 -49755761 + MIR SINE MIR 31 140 -68 184 171 73 0 chr20 16912215 16912256 -49755749 + L3 LINE CR1 1531 1574 -3 * 558 344 0 5 chr20 16913927 16914116 -49753889 + MLT1I LTR MaLR 7 194 -215 242 122 0 41 chr20 16914298 16914347 -49753658 + (TATG)n Simple_repeat Simple_repeat 3 49 0 595 264 190 48 chr20 16915485 16915529 -49752476 - LTR16C LTR ERVL -8 483 447 2040 231 89 8 chr20 16915529 16916045 -49751960 - MER74A LTR ERVL 0 558 1 595 264 190 48 chr20 16916045 16916337 -49751668 - LTR16C LTR ERVL -44 447 99 230 258 21 0 chr20 16916881 16916974 -49751031 + (TA)n Simple_repeat Simple_repeat 1 95 0 462 18 0 0 chr20 16916986 16917041 -49750964 + (TCTA)n Simple_repeat Simple_repeat 1 55 0 249 322 0 23 chr20 16917101 16917188 -49750817 + CT-rich Low_complexity Low_complexity 5 89 0 222 200 0 50 chr20 16918108 16918168 -49749837 + CT-rich Low_complexity Low_complexity 3 59 0 1404 177 23 34 chr20 16918375 16918641 -49749364 + AluJo SINE Alu 39 301 -11 2370 108 0 0 chr20 16918940 16919247 -49748758 + AluSx SINE Alu 1 307 -5 1131 218 100 50 chr20 16919418 16919917 -49748088 - L1MC4 LINE L1 -1 8041 7518 6094 102 12 12 chr20 16919948 16921242 -49746763 + L1PA11 LINE L1 4879 6172 -2 704 235 43 28 chr20 16921260 16921515 -49746490 - LTR37B LTR ERV1 -12 456 198 21 36 0 0 chr20 16922286 16922314 -49745691 + AT_rich Low_complexity Low_complexity 1 28 0 1604 171 0 0 chr20 16922667 16922930 -49745075 - AluJb SINE Alu 0 306 44 2221 121 3 0 chr20 16922937 16923235 -49744770 - AluSg SINE Alu -11 299 1 306 135 0 19 chr20 16923236 16923288 -49744717 - AluJb SINE Alu -251 51 1 331 298 98 32 chr20 16923391 16923791 -49744214 - L1ME4a LINE L1 -74 6047 5622 1623 178 56 7 chr20 16924065 16924351 -49743654 + AluJb SINE Alu 1 300 -12 514 290 51 23 chr20 16924385 16924561 -49743444 + MIR SINE MIR 82 262 0 461 195 213 6 chr20 16925737 16925882 -49742123 - MER5A DNA MER1_type -6 183 4 569 285 25 13 chr20 16925911 16926069 -49741936 - MER5A DNA MER1_type -21 168 9 213 192 0 50 chr20 16926202 16926265 -49741740 + MIR SINE MIR 106 145 -63 450 196 11 0 chr20 16926342 16926434 -49741571 - MER115 DNA AcHobo -8 685 593 1727 279 24 2 chr20 16926445 16926914 -49741091 - Zaphod DNA AcHobo -3434 597 119 393 277 122 64 chr20 16927728 16928024 -49739981 - MLT1J LTR MaLR -198 313 1 219 226 19 38 chr20 16930144 16930197 -49737808 - MIR SINE MIR -167 95 44 416 270 17 0 chr20 16930792 16930907 -49737098 - MLT1G1 LTR MaLR -478 117 1 766 192 107 122 chr20 16931384 16931698 -49736307 - L1ME2 LINE L1 -2 6162 5854 2864 13 0 0 chr20 16931698 16932012 -49735993 - AluYb8 SINE Alu -4 314 1 766 192 107 122 chr20 16932012 16932108 -49735897 - L1ME2 LINE L1 -310 5854 5758 * 4894 209 77 54 chr20 16932106 16932413 -49735592 - L1MDa LINE L1 -4449 2091 1793 2216 115 0 3 chr20 16932413 16932717 -49735288 - AluSg SINE Alu -7 303 1 4894 209 77 54 chr20 16932717 16934064 -49733941 - L1MDa LINE L1 -4747 1793 321 261 0 0 0 chr20 16934064 16934093 -49733912 + (TGG)n Simple_repeat Simple_repeat 3 31 0 * 297 0 0 0 chr20 16934092 16934125 -49733880 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1092 212 78 12 chr20 16934125 16934380 -49733625 - L1MDa LINE L1 -6260 280 9 235 179 0 0 chr20 16934448 16934487 -49733518 + MIR SINE MIR 209 247 -15 201 154 0 0 chr20 16935507 16935546 -49732459 + T-rich Low_complexity Low_complexity 1 39 0 2051 143 138 5 chr20 16935566 16935944 -49732061 + MSTA LTR MaLR 1 428 0 2048 180 24 7 chr20 16935945 16936368 -49731637 - L1MB7 LINE L1 -51 6133 5704 2200 162 21 21 chr20 16936368 16936788 -49731217 + MSTB LTR MaLR 1 420 -6 1789 154 46 0 chr20 16936789 16937134 -49730871 - L1MB7 LINE L1 -471 5713 5353 21 0 0 0 chr20 16937306 16937327 -49730678 + AT_rich Low_complexity Low_complexity 1 21 0 721 200 5 93 chr20 16937772 16937977 -49730028 + MER5A DNA MER1_type 3 189 0 599 229 0 7 chr20 16938877 16939017 -49728988 - FLAM_C SINE Alu 0 143 5 703 136 0 0 chr20 16939399 16939530 -49728475 + FLAM_C SINE Alu 18 148 0 405 0 0 0 chr20 16940229 16940274 -49727731 + (TG)n Simple_repeat Simple_repeat 2 46 0 21 71 0 0 chr20 16940529 16940571 -49727434 + AT_rich Low_complexity Low_complexity 1 42 0 375 287 36 101 chr20 16940657 16941044 -49726961 + HAL1 LINE L1 963 1324 -1183 1722 86 8 0 chr20 16941068 16941325 -49726680 + L1MA2 LINE L1 6046 6304 0 22 0 0 0 chr20 16941501 16941523 -49726482 + AT_rich Low_complexity Low_complexity 1 22 0 228 284 11 11 chr20 16941803 16941891 -49726114 + L2 LINE L2 3085 3172 -141 351 269 161 20 chr20 16942278 16942427 -49725578 - MIR SINE MIR -23 239 70 2217 63 0 4 chr20 16943766 16944034 -49723971 + AluY SINE Alu 27 293 -18 24 0 0 85 chr20 16944376 16944423 -49723582 + AT_rich Low_complexity Low_complexity 1 43 0 241 277 24 24 chr20 16945471 16945554 -49722451 - L3 LINE CR1 -120 1457 1375 213 208 0 21 chr20 16945834 16945882 -49722123 + L2 LINE L2 3265 3311 -2 986 264 70 51 chr20 16948739 16949259 -49718746 + MLT1G LTR MaLR 10 549 -6 351 245 86 58 chr20 16949278 16949417 -49718588 - MARNA DNA Mariner -3 583 441 2126 120 0 47 chr20 16949639 16949956 -49718049 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr20 16950108 16950138 -49717867 + AT_rich Low_complexity Low_complexity 1 30 0 1024 280 94 57 chr20 16950353 16950980 -49717025 - L1MC4a LINE L1 -497 5657 5523 384 298 75 25 chr20 16951091 16951252 -49716753 - MIR3 SINE MIR -23 185 17 258 294 42 56 chr20 16951753 16951896 -49716109 - MIR3 SINE MIR -30 178 38 245 98 24 0 chr20 16952329 16952370 -49715635 + (TCCC)n Simple_repeat Simple_repeat 3 44 0 338 227 27 18 chr20 16952668 16952778 -49715227 - MER103 DNA DNA -2 164 54 234 0 0 0 chr20 16952800 16952826 -49715179 + (T)n Simple_repeat Simple_repeat 1 26 0 2259 108 0 7 chr20 16953457 16953763 -49714242 - AluSc SINE Alu -4 305 2 261 180 0 0 chr20 16957025 16957075 -49710930 + CT-rich Low_complexity Low_complexity 3 52 0 253 270 40 14 chr20 16957391 16957465 -49710540 + MIR SINE MIR 64 139 -123 303 49 0 0 chr20 16958946 16958987 -49709018 + (TA)n Simple_repeat Simple_repeat 2 42 0 2759 22 0 3 chr20 16958996 16959308 -49708697 - AluY SINE Alu 0 311 1 317 248 179 0 chr20 16961461 16961578 -49706427 - MIR SINE MIR 0 262 125 1460 257 141 8 chr20 16961915 16962510 -49705495 + MER20B DNA MER1_type 1 674 -109 1028 277 67 26 chr20 16962510 16962896 -49705109 - LTR16C LTR ERVL 0 491 90 411 261 9 0 chr20 16962984 16963095 -49704910 + MER20B DNA MER1_type 667 778 -5 22 0 0 0 chr20 16964261 16964283 -49703722 + AT_rich Low_complexity Low_complexity 1 22 0 807 169 76 47 chr20 16965398 16965570 -49702435 + FRAM SINE Alu 1 176 0 1490 217 11 27 chr20 16965627 16966000 -49702005 + MLT1A2 LTR MaLR 4 370 -4 303 190 0 0 chr20 16966005 16966063 -49701942 + L1MC5 LINE L1 7856 7913 -48 251 283 11 22 chr20 16966100 16966192 -49701813 + MIR SINE MIR 137 227 -35 286 289 247 0 chr20 16966204 16966301 -49701704 - L2 LINE L2 -4 3309 3189 1137 240 10 38 chr20 16966957 16967270 -49700735 + L1MC4a LINE L1 7210 7513 -295 906 239 93 30 chr20 16967286 16967587 -49700418 - L1M4 LINE L1 -2275 3871 3552 1256 316 43 7 chr20 16967792 16968210 -49699795 - LTR16A LTR ERVL -2 448 16 204 40 0 0 chr20 16968489 16968514 -49699491 + (CA)n Simple_repeat Simple_repeat 2 26 0 1766 216 14 31 chr20 16968548 16968610 -49699395 - MER63 DNA MER1_type -11 1049 987 2441 60 0 35 chr20 16968610 16968925 -49699080 + AluY SINE Alu 1 304 -7 1766 216 14 31 chr20 16968925 16969279 -49698726 - MER63 DNA MER1_type -73 987 640 1892 159 50 0 chr20 16970530 16970850 -49697155 + MER47A DNA MER2_type 29 364 -2 252 100 0 0 chr20 16971236 16971276 -49696729 + (TG)n Simple_repeat Simple_repeat 1 40 0 2886 169 85 29 chr20 16971526 16972184 -49695821 + L1MB7 LINE L1 5471 6165 -19 2188 122 0 0 chr20 16972679 16972974 -49695031 - AluSx SINE Alu -17 295 1 332 296 93 69 chr20 16973258 16973677 -49694328 + L2 LINE L2 1935 2363 -951 951 252 22 45 chr20 16973833 16974146 -49693859 - LTR16C LTR ERVL 0 491 186 1658 270 38 10 chr20 16974510 16975013 -49692992 + MER119 DNA MER1_type 3 519 -64 530 340 194 17 chr20 16975610 16975904 -49692101 + L2 LINE L2 2924 3269 -3 21 0 0 0 chr20 16976596 16976617 -49691388 + AT_rich Low_complexity Low_complexity 1 21 0 914 259 122 31 chr20 16977275 16977596 -49690409 - MLT1I LTR MaLR 0 409 60 222 282 175 19 chr20 16977638 16977741 -49690264 - MIR SINE MIR -58 150 32 493 279 43 17 chr20 16977950 16978239 -49689766 - MLT2E LTR ERVL 0 628 273 * 631 219 39 0 chr20 16978210 16978338 -49689667 + MER58B DNA MER1_type 209 341 0 419 327 57 1 chr20 16979397 16979565 -49688440 + MIR SINE MIR 25 198 -62 339 380 12 24 chr20 16979670 16979836 -49688169 - MIR SINE MIR -76 186 23 225 0 0 0 chr20 16979906 16979931 -49688074 + (T)n Simple_repeat Simple_repeat 1 25 0 1767 259 52 0 chr20 16980346 16980806 -49687199 - MER110 LTR ERV1 -7 484 1 221 257 14 57 chr20 16982356 16982426 -49685579 - L2 LINE L2 -13 3300 3234 5967 135 89 13 chr20 16982504 16983293 -49684712 + Tigger3b DNA MER2_type 7 910 -2118 212 0 36 0 chr20 16983293 16983321 -49684684 + (CTCA)n Simple_repeat Simple_repeat 2 30 0 5967 135 89 13 chr20 16983321 16983667 -49684338 + Tigger3b DNA MER2_type 910 1228 -3 1217 216 66 83 chr20 16983690 16984158 -49683847 - LTR37B LTR ERV1 0 468 9 180 0 0 0 chr20 16984159 16984179 -49683826 + (CAA)n Simple_repeat Simple_repeat 2 21 0 246 192 0 0 chr20 16984895 16984947 -49683058 + (GAATG)n Simple_repeat Simple_repeat 1 52 0 3854 172 41 15 chr20 16984964 16985776 -49682229 - L1MA3 LINE L1 0 6305 5473 7154 133 24 7 chr20 16986882 16988991 -49679014 - L1MA3 LINE L1 0 6305 4167 1001 206 298 63 chr20 16989327 16989968 -49678037 - LTR48 LTR ERV1 -4 740 1 590 332 66 27 chr20 16991517 16991851 -49676154 + L2 LINE L2 2596 2942 -372 348 262 77 104 chr20 16992158 16992456 -49675549 + L2 LINE L2 2970 3259 -13 1520 155 10 51 chr20 16992681 16993024 -49674981 + MER61B LTR ERV1 1 425 0 2085 93 4 14 chr20 16993352 16993632 -49674373 + AluSg1 SINE Alu 7 283 -26 228 229 0 0 chr20 16993747 16993795 -49674210 + (TGAA)n Simple_repeat Simple_repeat 4 51 0 24 32 0 0 chr20 16994843 16994874 -49673131 + AT_rich Low_complexity Low_complexity 1 31 0 297 279 0 0 chr20 16995068 16995136 -49672869 + MER69 DNA AcHobo 1 68 -2458 1436 235 134 0 chr20 16995151 16995546 -49672459 + L1MD2 LINE L1 5685 6132 -227 371 225 0 0 chr20 16995969 16996049 -49671956 + MER69 DNA AcHobo 2440 2519 -7 2000 179 20 6 chr20 16996066 16996424 -49671581 - MLT1A1 LTR MaLR -2 363 1 270 299 80 0 chr20 16996447 16996626 -49671379 + L2 LINE L2 3160 3311 -2 2895 87 27 40 chr20 16998014 16998464 -49669541 + MLT2A1 LTR ERVL 1 444 0 453 329 83 9 chr20 16998746 16998974 -49669031 + MIR SINE MIR 18 262 0 420 310 81 101 chr20 16999611 17000056 -49667949 - L2 LINE L2 -1 3271 2836 206 214 54 107 chr20 17000064 17000176 -49667829 + MER5B DNA MER1_type 28 133 -45 214 49 24 24 chr20 17000190 17000231 -49667774 + (CAAA)n Simple_repeat Simple_repeat 4 44 0 199 279 0 0 chr20 17000231 17000274 -49667731 - MER5B DNA MER1_type -129 49 7 * 238 306 118 69 chr20 17000269 17000413 -49667592 - L2 LINE L2 -481 2833 2683 2441 76 0 0 chr20 17001095 17001399 -49666606 + AluY SINE Alu 1 304 -7 499 282 61 32 chr20 17001949 17002352 -49665653 - MLT1L LTR MaLR -1 614 156 673 172 185 0 chr20 17002476 17002627 -49665378 - MER5A DNA MER1_type 0 189 11 221 234 0 0 chr20 17002707 17002754 -49665251 + MIR SINE MIR 77 123 -139 204 220 0 60 chr20 17002757 17002807 -49665198 + polypurine Low_complexity Low_complexity 3 49 0 295 292 0 0 chr20 17004735 17004807 -49663198 - MIR SINE MIR -10 252 181 250 263 147 11 chr20 17004907 17005002 -49663003 + L2 LINE L2 3205 3312 -1 28 29 0 0 chr20 17005290 17005325 -49662680 + AT_rich Low_complexity Low_complexity 1 35 0 582 155 0 0 chr20 17005760 17005844 -49662161 - 5S rRNA rRNA -31 90 7 1951 153 26 34 chr20 17005846 17006224 -49661781 - THE1C LTR MaLR 0 375 1 10474 105 21 34 chr20 17006224 17007826 -49660179 - THE1C-int LTR MaLR 0 1580 1 1988 140 32 24 chr20 17007826 17008198 -49659807 - THE1C LTR MaLR 0 375 1 2308 109 3 0 chr20 17008367 17008703 -49659302 + AluSq SINE Alu 1 313 0 633 217 104 51 chr20 17008794 17009130 -49658875 - L1MC5 LINE L1 -48 7913 7560 232 273 0 74 chr20 17009309 17009430 -49658575 - L1MC5 LINE L1 -552 7409 7298 247 222 123 25 chr20 17009743 17009824 -49658181 + MIR SINE MIR 66 154 -108 1075 230 30 85 chr20 17010021 17010516 -49657489 + LTR37B LTR ERV1 1 468 0 495 264 66 74 chr20 17011390 17011648 -49656357 - L2 LINE L2 -15 3298 3043 654 276 81 42 chr20 17013068 17013351 -49654654 - MLT1K LTR MaLR 0 588 295 2746 194 20 14 chr20 17013359 17013816 -49654189 + MLT2B2 LTR ERVL 6 468 -47 468 99 0 0 chr20 17013816 17013887 -49654118 + (TCTA)n Simple_repeat Simple_repeat 2 72 0 2746 194 20 14 chr20 17013887 17013928 -49654077 + MLT2B2 LTR ERVL 468 507 -8 215 391 69 25 chr20 17014534 17014736 -49653269 - L2 LINE L2 -446 2868 2658 297 250 0 0 chr20 17014767 17014823 -49653182 - L2 LINE L2 -2 3270 3215 223 308 22 22 chr20 17014995 17015086 -49652919 + MIR SINE MIR 110 200 -62 22 56 0 0 chr20 17015135 17015171 -49652834 + AT_rich Low_complexity Low_complexity 1 36 0 204 214 0 0 chr20 17015791 17015833 -49652172 + (TCCA)n Simple_repeat Simple_repeat 4 45 0 25 51 0 0 chr20 17016564 17016603 -49651402 + AT_rich Low_complexity Low_complexity 1 39 0 799 158 0 8 chr20 17017018 17017151 -49650854 - FLAM_A SINE Alu -1 132 1 515 87 0 0 chr20 17017442 17017511 -49650494 - THE1B LTR MaLR -293 71 3 193 282 87 48 chr20 17017557 17017660 -49650345 + MIR SINE MIR 16 122 -86 551 325 123 20 chr20 17017896 17018188 -49649817 - L3 LINE CR1 -17 1560 1239 442 242 60 71 chr20 17018714 17018812 -49649193 + Charlie8 DNA MER1_type 15 112 -229 2309 92 0 10 chr20 17018812 17019118 -49648887 + AluSq SINE Alu 1 303 -10 442 242 60 71 chr20 17019118 17019201 -49648804 + Charlie8 DNA MER1_type 112 194 -147 229 205 61 0 chr20 17019841 17019907 -49648098 + L1MC/D LINE L1 5384 5456 -727 2467 122 8 3 chr20 17019940 17020302 -49647703 + THE1B LTR MaLR 1 364 0 674 206 161 62 chr20 17020452 17020572 -49647433 + L1MC5 LINE L1 7084 7191 -770 345 47 0 0 chr20 17020572 17020615 -49647390 + (CA)n Simple_repeat Simple_repeat 1 43 0 674 206 161 62 chr20 17020615 17020707 -49647298 + L1MC5 LINE L1 7191 7272 -689 2847 124 28 2 chr20 17020707 17021144 -49646861 + MER83 LTR ERV1 1 448 0 674 206 161 62 chr20 17021144 17021333 -49646672 + L1MC5 LINE L1 7272 7526 -435 21 0 0 0 chr20 17022857 17022878 -49645127 + AT_rich Low_complexity Low_complexity 1 21 0 401 305 70 32 chr20 17023063 17023250 -49644755 + MIR SINE MIR 16 209 -53 677 314 57 13 chr20 17023742 17023971 -49644034 - MIR SINE MIR -3 259 21 342 288 144 45 chr20 17024994 17025216 -49642789 - L3 LINE CR1 -431 1146 903 667 222 48 0 chr20 17025263 17025430 -49642575 - MER5B DNA MER1_type -3 175 1 518 218 241 0 chr20 17025445 17025578 -49642427 + MER5A DNA MER1_type 10 174 -15 673 180 23 8 chr20 17026577 17026705 -49641300 - FLAM_C SINE Alu 0 133 4 617 243 183 70 chr20 17027324 17027338 -49640667 - L1MC4a LINE L1 -1842 5966 5955 255 61 0 0 chr20 17027338 17027371 -49640634 + (CA)n Simple_repeat Simple_repeat 2 34 0 617 243 183 70 chr20 17027371 17027772 -49640233 - L1MC4a LINE L1 -1853 5955 5504 247 246 0 7 chr20 17027805 17027884 -49640121 - L1MC4a LINE L1 -741 5423 5347 287 298 265 7 chr20 17027884 17028035 -49639970 + MIR SINE MIR 73 262 0 185 346 156 17 chr20 17028494 17028841 -49639164 + L2 LINE L2 2563 2957 -357 22 0 0 0 chr20 17029127 17029149 -49638856 + AT_rich Low_complexity Low_complexity 1 22 0 621 301 55 34 chr20 17029255 17029453 -49638552 + MER102b DNA MER1_type 5 214 -1214 2558 173 24 18 chr20 17029453 17029963 -49638042 + LTR10D LTR ERV1 1 513 0 621 301 55 34 chr20 17029963 17030090 -49637915 + MER102b DNA MER1_type 214 337 -4 215 222 48 0 chr20 17030094 17030157 -49637848 + MIR SINE MIR 72 137 -71 423 300 0 40 chr20 17030851 17031074 -49636931 - L1MC4a LINE L1 -1869 5939 5726 568 267 140 36 chr20 17031321 17031542 -49636463 - MIR SINE MIR -2 260 17 1203 169 106 33 chr20 17031781 17032145 -49635860 - MSTB LTR MaLR -2 428 1 2602 203 25 102 chr20 17032325 17033270 -49634735 - L1MC4 LINE L1 0 8042 7170 430 349 165 34 chr20 17034569 17034921 -49633084 - L2 LINE L2 -5 3267 2870 473 325 53 22 chr20 17034947 17035175 -49632830 + MIR SINE MIR 2 236 -26 26 0 0 0 chr20 17035176 17035202 -49632803 + AT_rich Low_complexity Low_complexity 1 26 0 196 68 23 45 chr20 17036241 17036285 -49631720 + (CAAAAA)n Simple_repeat Simple_repeat 1 43 0 3514 139 7 0 chr20 17036373 17036927 -49631078 + L1PA16 LINE L1 5606 6163 -3 235 194 16 32 chr20 17037147 17037209 -49630796 + L1MC4a LINE L1 5629 5689 -2119 * 619 171 93 102 chr20 17037191 17037524 -49630481 + L1MC5 LINE L1 7586 7915 -46 317 288 25 75 chr20 17037538 17037698 -49630307 + L1MC4a LINE L1 5880 6031 -1777 219 186 0 0 chr20 17037796 17037839 -49630166 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 273 298 11 0 chr20 17037928 17038022 -49629983 + (TATG)n Simple_repeat Simple_repeat 1 95 0 2528 59 0 3 chr20 17038201 17038505 -49629500 + AluY SINE Alu 1 303 -8 23 54 0 0 chr20 17038824 17038861 -49629144 + AT_rich Low_complexity Low_complexity 1 37 0 434 312 19 0 chr20 17039101 17039255 -49628750 + L1MB5 LINE L1 2 158 -6384 769 204 0 0 chr20 17039288 17039420 -49628585 + AluJo SINE Alu 4 135 -177 844 289 57 41 chr20 17039575 17039994 -49628011 + L1MB5 LINE L1 359 784 -5758 6686 217 38 82 chr20 17040002 17042397 -49625608 + L1MB5 LINE L1 1349 3581 -3063 1021 247 167 46 chr20 17042397 17042433 -49625572 - MLT2B1 LTR ERVL -1 519 489 539 73 0 12 chr20 17042433 17042515 -49625490 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 1021 247 167 46 chr20 17042515 17042939 -49625066 - MLT2B1 LTR ERVL -31 489 3 6686 217 38 82 chr20 17042939 17044421 -49623584 + L1MB5 LINE L1 3581 5126 -1518 2891 176 69 38 chr20 17044429 17044925 -49623080 + L1MB5 LINE L1 5951 6477 -195 2029 100 21 0 chr20 17044925 17045204 -49622801 + AluSx SINE Alu 23 307 -5 2891 176 69 38 chr20 17045204 17045400 -49622605 + L1MB5 LINE L1 6477 6665 -7 551 279 79 16 chr20 17045743 17045933 -49622072 - MLT1J2 LTR MaLR -225 225 24 2248 109 0 3 chr20 17046764 17047067 -49620938 - AluSc SINE Alu -7 302 1 203 321 113 28 chr20 17047907 17048013 -49619992 + MIR SINE MIR 33 147 -61 23 0 0 0 chr20 17051412 17051435 -49616570 + AT_rich Low_complexity Low_complexity 1 23 0 996 269 58 52 chr20 17051913 17052330 -49615675 - MER39 LTR ERV1 0 707 73 2532 98 45 3 chr20 17052330 17052688 -49615317 - THE1C LTR MaLR -2 373 1 996 269 58 52 chr20 17052688 17052762 -49615243 - MER39 LTR ERV1 -634 73 1 767 273 92 51 chr20 17052831 17053457 -49614548 - L2 LINE L2 -5 3308 2659 488 245 97 97 chr20 17053720 17054059 -49613946 + L1ME4a LINE L1 5571 5909 -212 735 167 0 38 chr20 17054432 17054564 -49613441 + FLAM_C SINE Alu 1 127 -16 322 194 0 45 chr20 17054722 17054789 -49613216 + MER5A DNA MER1_type 53 116 -73 960 212 129 62 chr20 17054801 17055253 -49612752 + MER39 LTR ERV1 5 707 0 255 169 0 34 chr20 17055255 17055314 -49612691 + MER5A DNA MER1_type 133 189 0 21 71 0 0 chr20 17056491 17056533 -49611472 + AT_rich Low_complexity Low_complexity 1 42 0 181 169 34 34 chr20 17056748 17056807 -49611198 + (CATA)n Simple_repeat Simple_repeat 2 60 0 761 257 22 6 chr20 17058090 17058273 -49609732 + MER5A DNA MER1_type 1 186 -3 552 276 29 11 chr20 17058534 17058708 -49609297 + MIR SINE MIR 25 201 -61 294 289 105 0 chr20 17059373 17059487 -49608518 + MIR SINE MIR 6 131 -131 222 91 0 0 chr20 17060719 17060752 -49607253 + (CA)n Simple_repeat Simple_repeat 2 34 0 272 121 182 15 chr20 17062162 17062228 -49605777 - MER95 LTR ERV -2 429 353 1078 142 41 23 chr20 17062460 17062679 -49605326 - L1MA8 LINE L1 -6 6285 6063 1395 222 36 17 chr20 17062682 17063043 -49604962 - MER95 LTR ERV -59 372 5 778 252 49 24 chr20 17063518 17063764 -49604241 - MIR SINE MIR -4 258 7 200 143 24 0 chr20 17064132 17064174 -49603831 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 2427 91 0 0 chr20 17065054 17065412 -49602593 - AluSg1 SINE Alu 0 358 1 696 101 0 0 chr20 17065839 17065928 -49602077 - FLAM SINE Alu -17 126 38 34 42 0 0 chr20 17066299 17066347 -49601658 + AT_rich Low_complexity Low_complexity 1 48 0 1624 201 0 10 chr20 17066751 17067039 -49600966 + AluJo SINE Alu 7 291 -21 223 280 150 30 chr20 17068536 17068636 -49599369 - MIR SINE MIR -72 136 25 1460 208 40 30 chr20 17069850 17070220 -49597785 - MLT1A2 LTR MaLR 0 374 1 327 283 10 10 chr20 17070246 17070345 -49597660 - L2 LINE L2 -1 3312 3214 950 200 24 29 chr20 17070524 17070734 -49597271 + MER3 DNA MER1_type 1 209 0 23 0 0 0 chr20 17071078 17071101 -49596904 + AT_rich Low_complexity Low_complexity 1 23 0 554 209 0 35 chr20 17071101 17071216 -49596789 - FRAM SINE Alu -54 122 12 356 272 134 69 chr20 17072550 17072638 -49595367 + L2 LINE L2 3052 3133 -180 276 100 0 0 chr20 17072638 17072678 -49595327 + (TATAA)n Simple_repeat Simple_repeat 1 40 0 356 272 134 69 chr20 17072678 17072835 -49595170 + L2 LINE L2 3133 3313 0 673 285 45 77 chr20 17072951 17073393 -49594612 + MLT1J2 LTR MaLR 1 428 -22 2654 93 0 29 chr20 17073489 17073864 -49594141 - THE1B LTR MaLR 0 364 1 2153 112 0 3 chr20 17074451 17074746 -49593259 + AluSg SINE Alu 1 294 -16 198 0 0 0 chr20 17075910 17075932 -49592073 + (CAAAAA)n Simple_repeat Simple_repeat 3 24 0 325 335 68 11 chr20 17076230 17076406 -49591599 + MIR SINE MIR 8 193 -69 782 287 50 4 chr20 17076408 17076666 -49591339 + MER77 LTR ERV1 329 598 -7 399 300 82 45 chr20 17077516 17077627 -49590378 + L1ME4a LINE L1 5411 5516 -605 9190 25 5 0 chr20 17077627 17079479 -49588526 + L1PA4 LINE L1 4289 6144 -11 399 300 82 45 chr20 17079479 17079854 -49588151 + L1ME4a LINE L1 5516 5915 -206 427 263 73 7 chr20 17079897 17080034 -49587971 - MIR SINE MIR -40 222 77 1828 252 75 68 chr20 17080069 17080799 -49587206 - MER21B LTR ERV1 -128 735 1 808 262 31 26 chr20 17081100 17081329 -49586676 + MIR SINE MIR 23 252 -10 1908 159 7 3 chr20 17081477 17081766 -49586239 + AluSx SINE Alu 1 290 -22 2535 58 0 6 chr20 17082772 17083084 -49584921 - AluY SINE Alu -1 310 1 1670 175 79 23 chr20 17083598 17083952 -49584053 - MLT1A2 LTR MaLR 0 374 1 220 149 64 0 chr20 17084105 17084152 -49583853 + (TTTAA)n Simple_repeat Simple_repeat 3 52 0 38 39 0 0 chr20 17084490 17084542 -49583463 + AT_rich Low_complexity Low_complexity 1 52 0 2267 228 114 11 chr20 17084701 17085394 -49582611 - L1MD2 LINE L1 0 6359 5604 4307 238 61 22 chr20 17085570 17086977 -49581028 - L1MD2 LINE L1 -613 5629 4130 2169 99 61 0 chr20 17086977 17087270 -49580735 - AluSx SINE Alu -1 311 1 4307 238 61 22 chr20 17087270 17087570 -49580435 - L1MD2 LINE L1 -2112 4130 3843 25 0 0 0 chr20 17087825 17087850 -49580155 + AT_rich Low_complexity Low_complexity 1 25 0 315 169 46 15 chr20 17087880 17087945 -49580060 + GA-rich Low_complexity Low_complexity 2 68 0 435 119 0 0 chr20 17087945 17088012 -49579993 + (GGAA)n Simple_repeat Simple_repeat 3 69 0 22 0 0 0 chr20 17088990 17089012 -49578993 + AT_rich Low_complexity Low_complexity 1 22 0 2159 100 14 3 chr20 17090359 17090650 -49577355 + AluSg SINE Alu 1 294 -16 22 0 0 0 chr20 17091071 17091093 -49576912 + AT_rich Low_complexity Low_complexity 1 22 0 1510 161 33 50 chr20 17091528 17091827 -49576178 - AluJo SINE Alu -18 294 1 2358 88 0 0 chr20 17092006 17092301 -49575704 - AluSg SINE Alu -15 295 1 23 54 0 0 chr20 17092856 17092893 -49575112 + AT_rich Low_complexity Low_complexity 1 37 0 695 199 25 19 chr20 17093118 17093279 -49574726 + MER5A DNA MER1_type 1 162 -27 2219 106 0 3 chr20 17093437 17093738 -49574267 - AluSx SINE Alu -12 300 1 21 0 0 0 chr20 17095846 17095867 -49572138 + AT_rich Low_complexity Low_complexity 1 21 0 466 291 74 34 chr20 17097200 17097578 -49570427 - L1ME LINE L1 -512 5719 5327 21 36 0 0 chr20 17097650 17097678 -49570327 + AT_rich Low_complexity Low_complexity 1 28 0 1503 204 17 27 chr20 17097745 17098039 -49569966 + AluJo SINE Alu 1 291 -21 289 260 31 68 chr20 17098310 17098372 -49569633 - L1ME LINE L1 -1453 4762 4699 1710 199 7 0 chr20 17098372 17098678 -49569327 - AluJo SINE Alu -4 308 1 289 260 31 68 chr20 17098678 17098807 -49569198 - L1ME LINE L1 -1516 4699 4578 220 222 16 16 chr20 17098916 17098979 -49569026 + (TTTG)n Simple_repeat Simple_repeat 2 64 0 247 241 138 0 chr20 17098986 17099073 -49568932 - L1ME LINE L1 -5045 1351 1253 279 239 23 11 chr20 17099127 17099215 -49568790 + (TA)n Simple_repeat Simple_repeat 2 90 0 216 235 0 0 chr20 17099242 17099310 -49568695 + (TA)n Simple_repeat Simple_repeat 1 68 0 342 303 5 128 chr20 17100665 17100876 -49567129 - MIR SINE MIR -18 244 60 472 346 78 6 chr20 17101644 17101831 -49566174 - MIR3 SINE MIR -2 206 4 2467 85 0 0 chr20 17101859 17102165 -49565840 - AluY SINE Alu -5 306 1 211 229 0 21 chr20 17102308 17102356 -49565649 + A-rich Low_complexity Low_complexity 3 49 0 2108 79 3 0 chr20 17102826 17103128 -49564877 + L1PA7 LINE L1 5852 6153 -1 198 167 0 0 chr20 17103259 17103295 -49564710 + GA-rich Low_complexity Low_complexity 3 38 0 331 209 0 0 chr20 17104294 17104361 -49563644 + MER116 DNA Mariner 14 80 0 974 318 46 44 chr20 17104361 17104928 -49563077 + L2 LINE L2 2282 2849 -465 498 289 71 40 chr20 17104994 17105219 -49562786 + L2 LINE L2 2942 3173 -140 2686 221 68 12 chr20 17105431 17106229 -49561776 - MER63C DNA MER1_type -88 842 1 1526 134 142 19 chr20 17106394 17106662 -49561343 + AluJb SINE Alu 1 301 -1 216 250 0 19 chr20 17107449 17107501 -49560504 + L2 LINE L2 3221 3271 -1 1301 139 0 29 chr20 17109246 17109454 -49558551 - AluSg/x SINE Alu -25 285 84 265 291 0 0 chr20 17109579 17109634 -49558371 - L2 LINE L2 -11 3261 3207 28 29 0 0 chr20 17109698 17109733 -49558272 + AT_rich Low_complexity Low_complexity 1 35 0 411 295 9 0 chr20 17111319 17111424 -49556581 - MIR3 SINE MIR -16 192 87 474 299 26 20 chr20 17112298 17112553 -49555452 + CT-rich Low_complexity Low_complexity 1 256 0 1607 144 11 49 chr20 17112714 17112999 -49555006 - AluJo SINE Alu -11 301 28 180 111 0 0 chr20 17113216 17113243 -49554762 + (GGGA)n Simple_repeat Simple_repeat 2 28 0 687 211 39 6 chr20 17113427 17113607 -49554398 - MER53 DNA DNA -3 186 1 349 295 129 42 chr20 17113667 17114118 -49553887 - L2 LINE L2 -1022 2292 1803 426 90 75 0 chr20 17114154 17114221 -49553784 + MER53 DNA DNA 1 72 -117 243 213 0 49 chr20 17114311 17114372 -49553633 + GA-rich Low_complexity Low_complexity 1 58 0 730 257 115 7 chr20 17114419 17114715 -49553290 - MER46C DNA MER2_type -1 337 10 647 277 69 50 chr20 17115218 17115521 -49552484 + L2 LINE L2 2996 3304 -9 21 0 0 0 chr20 17117383 17117404 -49550601 + AT_rich Low_complexity Low_complexity 1 21 0 461 316 30 6 chr20 17117634 17117802 -49550203 + CT-rich Low_complexity Low_complexity 2 173 0 254 357 25 19 chr20 17118282 17118439 -49549566 + L2 LINE L2 2334 2491 -823 29 94 0 0 chr20 17120343 17120428 -49547577 + AT_rich Low_complexity Low_complexity 1 85 0 1023 162 5 46 chr20 17120430 17120627 -49547378 - MER58A DNA MER1_type 0 224 36 224 154 77 77 chr20 17120732 17120797 -49547208 + L3 LINE CR1 412 476 -1101 591 294 43 19 chr20 17121196 17121407 -49546598 - MIR SINE MIR -4 258 43 232 349 35 0 chr20 17121472 17121558 -49546447 - MIR3 SINE MIR -10 198 110 1887 139 13 25 chr20 17122256 17122572 -49545433 - AluJb SINE Alu 0 312 1 344 330 52 0 chr20 17123257 17123372 -49544633 - MIR SINE MIR -108 154 34 261 327 49 37 chr20 17123587 17123749 -49544256 - MLT1J LTR MaLR -94 417 254 255 61 0 0 chr20 17123777 17123810 -49544195 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 767 214 21 7 chr20 17123813 17123958 -49544047 - FRAM SINE Alu -30 146 1 180 269 125 39 chr20 17125289 17125393 -49542612 + L2 LINE L2 3000 3112 -160 2560 40 0 3 chr20 17126015 17126313 -49541692 - AluY SINE Alu -14 297 1 663 279 113 0 chr20 17126458 17126687 -49541318 + MIR SINE MIR 6 260 -2 25 0 0 0 chr20 17127387 17127412 -49540593 + AT_rich Low_complexity Low_complexity 1 25 0 2188 104 0 4 chr20 17127917 17128238 -49539767 - AluSq SINE Alu 0 325 6 294 125 0 0 chr20 17128385 17128433 -49539572 + (GGA)n Simple_repeat Simple_repeat 2 49 0 402 276 125 52 chr20 17128456 17128880 -49539125 + MLT1J LTR MaLR 5 459 -52 2155 151 49 36 chr20 17129850 17130295 -49537710 + L1MB7 LINE L1 5718 6168 -16 209 319 18 157 chr20 17130569 17130958 -49537047 + L2 LINE L2 2917 3251 -21 185 270 9 113 chr20 17131116 17131231 -49536774 - MIR SINE MIR -71 191 89 551 270 170 4 chr20 17132241 17132482 -49535523 + LTR16C LTR ERVL 209 489 -2 839 216 110 26 chr20 17132546 17132773 -49535232 + MIR SINE MIR 2 247 -15 616 256 0 15 chr20 17132789 17132926 -49535079 - MIR3 SINE MIR -6 202 68 530 248 89 9 chr20 17134531 17134745 -49533260 - LTR16C LTR ERVL -12 479 249 180 0 0 0 chr20 17135629 17135649 -49532356 + (CA)n Simple_repeat Simple_repeat 1 20 0 279 0 0 0 chr20 17136125 17136156 -49531849 + (CA)n Simple_repeat Simple_repeat 2 32 0 209 311 33 0 chr20 17138722 17138783 -49529222 + MER5A DNA MER1_type 69 131 -58 471 325 147 0 chr20 17139232 17139389 -49528616 + MER5A DNA MER1_type 9 188 -1 383 219 73 0 chr20 17139783 17139879 -49528126 + MER5A DNA MER1_type 4 106 -83 275 365 20 20 chr20 17139944 17140092 -49527913 + L3 LINE CR1 1414 1561 -16 212 188 16 0 chr20 17140700 17140764 -49527241 + (TCCA)n Simple_repeat Simple_repeat 4 68 0 2368 48 7 3 chr20 17141598 17141892 -49526113 + AluY SINE Alu 1 295 -16 1832 169 3 28 chr20 17142284 17142604 -49525401 + AluJo SINE Alu 1 312 0 716 152 179 7 chr20 17142622 17142773 -49525232 + MER5A DNA MER1_type 12 188 -1 220 306 19 37 chr20 17143002 17143110 -49524895 + MIR3 SINE MIR 13 118 -90 413 291 134 36 chr20 17143994 17144351 -49523654 - LTR16C LTR ERVL 0 491 100 1280 238 17 17 chr20 17145780 17146070 -49521935 + AluJo SINE Alu 2 291 -21 1900 178 0 3 chr20 17146075 17146378 -49521627 + AluJo SINE Alu 5 306 -6 362 278 32 16 chr20 17146392 17146579 -49521426 + L1MC4a LINE L1 5708 5897 -1911 1087 264 137 40 chr20 17146661 17147215 -49520790 - L2 LINE L2 0 3313 2698 307 287 81 52 chr20 17147450 17147624 -49520381 + MIR SINE MIR 84 262 0 242 307 102 31 chr20 17147739 17147866 -49520139 - MIR3 SINE MIR -3 205 70 368 178 158 0 chr20 17147949 17148050 -49519955 + MER113 DNA MER1_type? 78 194 -327 1694 147 37 37 chr20 17148417 17148770 -49519235 - MLT1A1 LTR MaLR 0 365 13 244 260 14 0 chr20 17148781 17148796 -49519209 - MLT1H LTR MaLR -447 102 89 1575 174 19 40 chr20 17148796 17149169 -49518836 - MLT1A1 LTR MaLR 0 365 1 244 260 14 0 chr20 17149169 17149226 -49518779 - MLT1H LTR MaLR -460 89 29 1805 184 0 7 chr20 17149411 17149721 -49518284 + AluJo SINE Alu 1 308 -4 1963 228 66 30 chr20 17149732 17150442 -49517563 + HsTC2a DNA MER2_type 5 740 -4 1502 6 0 0 chr20 17151037 17151195 -49516810 + SVA Other Other 1227 1384 -2 1667 148 0 8 chr20 17151315 17151579 -49516426 - AluJb SINE Alu -8 304 43 264 143 0 0 chr20 17151957 17152013 -49515992 + (TC)n Simple_repeat Simple_repeat 2 57 0 1303 271 23 0 chr20 17152443 17152790 -49515215 - LTR16A LTR ERVL -15 435 81 1173 190 38 0 chr20 17152814 17153025 -49514980 + MER20 DNA MER1_type 1 219 0 3078 149 22 9 chr20 17153309 17153844 -49514161 + MER34 LTR ERV1 1 542 0 183 194 0 0 chr20 17154324 17154355 -49513650 - L2 LINE L2 -26 3287 3257 3234 128 43 59 chr20 17154757 17155388 -49512617 - L1PB4 LINE L1 -2 6154 5534 1025 196 65 14 chr20 17155629 17155905 -49512100 + MER63 DNA MER1_type 1 290 -640 1191 202 73 3 chr20 17155906 17156193 -49511812 + MER63 DNA MER1_type 733 1039 -21 5887 154 28 9 chr20 17157930 17160154 -49507851 + L1PB2 LINE L1 3890 6149 -2 691 261 19 48 chr20 17160363 17160641 -49507364 - L1M2 LINE L1 -532 5632 5378 2070 137 25 27 chr20 17161152 17161517 -49506488 - THE1B LTR MaLR 0 364 1 3330 113 8 2 chr20 17162482 17162977 -49505028 - L1PA14 LINE L1 -9 6152 5655 1111 127 42 0 chr20 17162978 17163143 -49504862 + AluSq SINE Alu 127 298 -15 2707 80 3 0 chr20 17163143 17163531 -49504474 - L1PA14 LINE L1 -494 5667 5279 229 295 53 21 chr20 17163706 17163801 -49504204 + L2 LINE L2 3169 3266 -6 250 226 0 0 chr20 17166523 17166585 -49501420 + L1PB4 LINE L1 6091 6152 -4 22 56 0 0 chr20 17166585 17166621 -49501384 + AT_rich Low_complexity Low_complexity 1 36 0 263 218 122 54 chr20 17167268 17167415 -49500590 - MLT1J1 LTR MaLR -2 444 288 364 275 55 0 chr20 17167535 17167695 -49500310 - MLT1J2 LTR MaLR -294 156 21 274 293 37 0 chr20 17168651 17168733 -49499272 + L2 LINE L2 3228 3312 -1 1334 227 105 0 chr20 17168970 17169323 -49498682 - L1MB8 LINE L1 -83 6095 5706 514 295 78 16 chr20 17169615 17169808 -49498197 + MIR SINE MIR 5 209 -53 284 284 39 29 chr20 17169833 17169935 -49498070 + MIR SINE MIR 150 252 -10 330 239 33 11 chr20 17169972 17170064 -49497941 + L2 LINE L2 3176 3269 -44 446 338 0 14 chr20 17170681 17170829 -49497176 - MIR3 SINE MIR -6 202 57 396 40 0 0 chr20 17172021 17172071 -49495934 + (TG)n Simple_repeat Simple_repeat 2 51 0 380 280 0 11 chr20 17173474 17173567 -49494438 + L2 LINE L2 3181 3272 0 2215 131 0 6 chr20 17174686 17174999 -49493006 + AluSx SINE Alu 1 311 -1 181 235 17 26 chr20 17175032 17175147 -49492858 + (TA)n Simple_repeat Simple_repeat 1 114 0 203 241 17 0 chr20 17175510 17175568 -49492437 + (TG)n Simple_repeat Simple_repeat 2 60 0 237 33 0 0 chr20 17176389 17176419 -49491586 + (A)n Simple_repeat Simple_repeat 1 30 0 319 274 170 15 chr20 17178546 17178681 -49489324 - MIR SINE MIR -76 186 31 432 0 0 0 chr20 17179382 17179430 -49488575 + (CA)n Simple_repeat Simple_repeat 2 49 0 217 298 73 46 chr20 17181152 17181303 -49486702 + L2 LINE L2 2826 2980 -333 642 242 22 44 chr20 17181666 17181848 -49486157 - MER5B DNA MER1_type 0 178 1 237 132 0 0 chr20 17182013 17182051 -49485954 + (T)n Simple_repeat Simple_repeat 1 38 0 227 299 23 23 chr20 17182820 17182907 -49485098 + MIR SINE MIR 90 176 -86 192 77 0 0 chr20 17182925 17182951 -49485054 + (A)n Simple_repeat Simple_repeat 1 26 0 186 71 0 0 chr20 17183587 17183615 -49484390 + (T)n Simple_repeat Simple_repeat 1 28 0 297 311 47 9 chr20 17184821 17184927 -49483078 + MLT1K LTR MaLR 62 171 -417 246 325 133 31 chr20 17184934 17185189 -49482816 + MLT1K LTR MaLR 136 416 -172 1080 236 210 14 chr20 17185236 17185727 -49482278 + LTR50 LTR ERVL 209 795 0 270 0 0 0 chr20 17185953 17185983 -49482022 + (TA)n Simple_repeat Simple_repeat 2 31 0 836 207 24 6 chr20 17185983 17186147 -49481858 - FAM SINE Alu -18 167 1 21 0 0 0 chr20 17186208 17186229 -49481776 + AT_rich Low_complexity Low_complexity 1 21 0 199 295 16 16 chr20 17186396 17186457 -49481548 + L2 LINE L2 3134 3194 -78 236 252 49 73 chr20 17186502 17186625 -49481380 + MIR SINE MIR 72 191 -71 259 190 35 0 chr20 17186735 17186793 -49481212 - MLT1G1 LTR MaLR -2 593 534 498 245 65 7 chr20 17188145 17188300 -49479705 + MER117 DNA MER1_type 2 165 -32 2256 113 3 0 chr20 17188443 17188745 -49479260 + AluSx SINE Alu 1 303 -9 1425 173 129 18 chr20 17189019 17189291 -49478714 - AluJb SINE Alu 0 302 1 237 347 178 27 chr20 17189662 17189887 -49478118 + L2 LINE L2 2985 3243 -29 457 312 65 33 chr20 17190858 17191073 -49476932 - L2 LINE L2 -17 3296 3075 288 91 0 0 chr20 17191168 17191212 -49476793 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 789 304 29 18 chr20 17191966 17192402 -49475603 + LTR16C LTR ERVL 1 491 0 307 287 50 0 chr20 17192403 17192504 -49475501 - MIR SINE MIR -52 210 105 223 349 12 0 chr20 17192730 17192813 -49475192 - L2 LINE L2 -1 3271 3188 381 278 160 0 chr20 17194776 17194920 -49473085 - MIR SINE MIR -13 249 83 2076 130 0 3 chr20 17195016 17195324 -49472681 - AluSg SINE Alu 0 307 1 288 280 60 20 chr20 17195344 17195444 -49472561 + L2 LINE L2 298 401 -2913 236 284 134 8 chr20 17196344 17196478 -49471527 - MIR SINE MIR -20 242 92 255 334 80 65 chr20 17196567 17197309 -49470696 + L2 LINE L2 1352 2104 -1210 531 350 40 5 chr20 17198024 17198247 -49469758 + MIR SINE MIR 23 253 -9 599 304 20 49 chr20 17198916 17199163 -49468842 + MIR SINE MIR 21 260 -2 1426 198 96 31 chr20 17199922 17200245 -49467760 - MER2 DNA MER2_type 0 344 1 1056 248 75 28 chr20 17201127 17201486 -49466519 - HsTC2 DNA Tc2 -3 1895 1520 1452 177 24 0 chr20 17202068 17202316 -49465689 - AluJo SINE Alu -4 308 55 520 325 57 68 chr20 17202483 17202637 -49465368 - LTR16C LTR ERVL -33 458 304 2399 207 8 37 chr20 17202637 17203155 -49464850 + MLT1D LTR MaLR 1 503 -2 520 325 57 68 chr20 17203155 17203369 -49464636 - LTR16C LTR ERVL -187 304 94 282 29 0 0 chr20 17203515 17203550 -49464455 + (TG)n Simple_repeat Simple_repeat 2 36 0 2855 3 0 3 chr20 17204241 17204548 -49463457 - AluYa5 SINE Alu -5 306 1 245 330 30 0 chr20 17205916 17206016 -49461989 + LTR33 LTR ERVL 419 521 0 224 200 15 31 chr20 17206430 17206495 -49461510 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 1349 136 5 0 chr20 17207247 17207460 -49460545 + L1MC/D LINE L1 5329 5542 -791 4537 207 29 13 chr20 17207538 17209018 -49458987 - L1MC/D LINE L1 -673 5940 4433 396 0 0 0 chr20 17209018 17209062 -49458943 + (TTTTA)n Simple_repeat Simple_repeat 2 45 0 4537 207 29 13 chr20 17209062 17209104 -49458901 - L1MC/D LINE L1 -2180 4433 4393 4648 172 9 74 chr20 17209104 17210062 -49457943 - L1MC/D LINE L1 -5498 928 33 270 226 134 73 chr20 17211437 17211601 -49456404 - MIR SINE MIR -74 188 15 248 263 10 40 chr20 17211812 17211911 -49456094 - MLT1H LTR MaLR 0 549 454 384 231 8 26 chr20 17212072 17212189 -49455816 - MLT1H LTR MaLR -376 173 59 342 274 19 0 chr20 17213388 17213494 -49454511 - L2 LINE L2 -77 3236 3129 312 244 49 32 chr20 17213500 17213623 -49454382 - L2 LINE L2 -508 2806 2682 801 97 14 28 chr20 17215107 17215251 -49452754 + (TTCC)n Simple_repeat Simple_repeat 3 144 0 1276 198 117 14 chr20 17215253 17215536 -49452469 - AluJo SINE Alu 0 312 1 2482 63 89 0 chr20 17215569 17215885 -49452120 - LTR14A LTR ERVK 0 344 1 278 265 0 41 chr20 17215980 17216078 -49451927 + MIR SINE MIR 159 252 -10 1252 270 101 13 chr20 17216388 17216766 -49451239 - LTR16C LTR ERVL 0 491 81 1931 251 62 10 chr20 17219192 17219711 -49448294 + L1ME3 LINE L1 5524 6069 -93 372 94 0 0 chr20 17219712 17219765 -49448240 + (TG)n Simple_repeat Simple_repeat 1 53 0 196 346 182 35 chr20 17220005 17220236 -49447769 - L3 LINE CR1 -7 1570 1306 596 318 61 86 chr20 17220595 17221070 -49446935 - L2 LINE L2 -2 3270 2808 233 324 167 20 chr20 17221257 17221461 -49446544 - L2 LINE L2 -2501 813 580 2142 120 0 0 chr20 17222274 17222565 -49445440 - AluSg1 SINE Alu -18 291 1 225 322 25 17 chr20 17222761 17222879 -49445126 + L2 LINE L2 3103 3221 -92 811 208 56 4 chr20 17223569 17223770 -49444235 + L1MB7 LINE L1 5926 6131 -43 219 267 168 69 chr20 17225949 17226080 -49441925 - MIR SINE MIR -71 191 48 967 325 109 42 chr20 17226945 17227716 -49440289 - L2 LINE L2 0 3313 2496 660 339 104 14 chr20 17227719 17228085 -49439920 - MLT1I LTR MaLR -4 405 7 585 270 27 77 chr20 17228095 17228354 -49439651 - L2 LINE L2 -812 2502 2257 636 183 17 25 chr20 17232177 17232418 -49435587 + CT-rich Low_complexity Low_complexity 1 239 0 522 101 45 11 chr20 17232421 17232510 -49435495 + T-rich Low_complexity Low_complexity 4 95 0 435 290 130 7 chr20 17234668 17234806 -49433199 + MIR3 SINE MIR 42 196 -12 236 219 143 76 chr20 17236820 17236925 -49431080 + MER5A DNA MER1_type 44 155 -34 558 222 0 9 chr20 17238791 17238899 -49429106 + Tigger3(Golem) DNA MER2_type 1 107 -2922 * 4013 145 45 18 chr20 17238891 17239621 -49428384 + Tigger3(Golem) DNA MER2_type 2278 3027 -2 326 281 189 27 chr20 17239636 17239821 -49428184 - MIR SINE MIR 0 262 48 185 255 21 0 chr20 17240596 17240643 -49427362 + L2 LINE L2 3266 3313 0 381 348 79 35 chr20 17241333 17241560 -49426445 - L2 LINE L2 0 3272 3036 1626 227 82 5 chr20 17241704 17242131 -49425874 + Charlie4a DNA MER1_type 35 494 -14 809 329 75 9 chr20 17242141 17242582 -49425423 + L2 LINE L2 2839 3308 -5 296 257 30 30 chr20 17243549 17243650 -49424355 + GA-rich Low_complexity Low_complexity 2 102 0 859 165 0 0 chr20 17243692 17243825 -49424180 + FLAM_C SINE Alu 1 133 -10 295 194 180 122 chr20 17243933 17244028 -49423977 - MIR SINE MIR 0 262 174 645 49 0 0 chr20 17244028 17244109 -49423896 + (TTCC)n Simple_repeat Simple_repeat 3 83 0 2052 84 0 49 chr20 17244113 17244399 -49423606 - AluY SINE Alu -39 272 1 295 194 180 122 chr20 17244399 17244437 -49423568 - MIR SINE MIR -90 172 116 364 245 138 0 chr20 17247075 17247169 -49420836 - MER96 DNA MER1_type? 0 175 69 223 296 265 0 chr20 17248850 17248982 -49419023 - MIR SINE MIR -25 237 71 537 296 136 20 chr20 17249230 17249524 -49418481 - MER102b DNA MER1_type -2 339 12 850 188 34 0 chr20 17249727 17249903 -49418102 - MER3 DNA MER1_type -22 187 6 23 78 0 0 chr20 17250950 17251001 -49417004 + AT_rich Low_complexity Low_complexity 1 51 0 210 194 83 0 chr20 17251076 17251112 -49416893 + L2 LINE L2 3154 3192 -80 815 257 25 38 chr20 17252811 17253048 -49414957 + L2 LINE L2 3078 3311 -2 505 205 216 32 chr20 17253055 17253116 -49414889 + MER20 DNA MER1_type 1 49 -170 2035 111 46 0 chr20 17253116 17253396 -49414609 - AluSg SINE Alu -17 293 1 505 205 216 32 chr20 17253396 17253519 -49414486 + MER20 DNA MER1_type 49 219 0 285 256 30 60 chr20 17253986 17254119 -49413886 - MLT1J LTR MaLR -57 454 326 270 116 0 0 chr20 17254244 17254287 -49413718 + (TG)n Simple_repeat Simple_repeat 2 44 0 2281 67 60 0 chr20 17255426 17255711 -49412294 + AluY SINE Alu 1 302 -9 26 0 0 0 chr20 17256027 17256053 -49411952 + AT_rich Low_complexity Low_complexity 1 26 0 41 96 0 0 chr20 17256227 17256352 -49411653 + AT_rich Low_complexity Low_complexity 1 125 0 812 170 21 27 chr20 17257124 17257312 -49410693 - MER53 DNA DNA -2 187 1 21 0 0 0 chr20 17257523 17257544 -49410461 + AT_rich Low_complexity Low_complexity 1 21 0 350 329 37 12 chr20 17257724 17257885 -49410120 + MIR3 SINE MIR 23 187 -21 387 83 0 0 chr20 17258498 17258558 -49409447 + (TC)n Simple_repeat Simple_repeat 2 61 0 251 356 68 20 chr20 17258971 17259117 -49408888 - MIR SINE MIR -108 154 2 21 57 0 0 chr20 17259926 17259961 -49408044 + AT_rich Low_complexity Low_complexity 1 35 0 1672 190 10 10 chr20 17259962 17260251 -49407754 - AluJo SINE Alu -23 289 1 912 221 6 0 chr20 17260317 17260475 -49407530 + MER5A DNA MER1_type 1 159 -30 247 325 114 87 chr20 17261914 17261991 -49406014 + L2 LINE L2 2835 2908 -364 2034 143 41 39 chr20 17261991 17262354 -49405651 + THE1B LTR MaLR 1 364 0 247 325 114 87 chr20 17262354 17262443 -49405562 + L2 LINE L2 2908 2993 -279 2293 128 0 0 chr20 17262443 17262749 -49405256 - AluSx SINE Alu -6 306 1 247 325 114 87 chr20 17262749 17262993 -49405012 + L2 LINE L2 2993 3257 -15 * 252 370 55 0 chr20 17262978 17263124 -49404881 - L2 LINE L2 -562 2752 2599 295 243 0 57 chr20 17263174 17263244 -49404761 - L2 LINE L2 0 3272 3207 302 367 77 24 chr20 17263264 17263512 -49404493 - L2 LINE L2 -747 2567 2307 24 53 0 0 chr20 17263969 17264007 -49403998 + AT_rich Low_complexity Low_complexity 1 38 0 2419 68 0 3 chr20 17264681 17264976 -49403029 + AluY SINE Alu 1 294 -17 268 339 144 50 chr20 17265292 17265575 -49402430 - L2 LINE L2 -571 2743 2413 2151 200 11 29 chr20 17265575 17266051 -49401954 - MLT1C LTR MaLR 0 467 1 268 339 144 50 chr20 17266051 17266148 -49401857 - L2 LINE L2 -901 2413 2327 429 299 39 53 chr20 17267125 17267332 -49400673 + MIR SINE MIR 17 220 -42 532 257 37 32 chr20 17268199 17268386 -49399619 + MIR SINE MIR 75 262 0 316 239 30 45 chr20 17268926 17269060 -49398945 - MLT1H LTR MaLR -374 175 44 21 0 0 0 chr20 17269713 17269734 -49398271 + AT_rich Low_complexity Low_complexity 1 21 0 2063 107 36 0 chr20 17270948 17271229 -49396776 + AluSq SINE Alu 1 291 -22 187 344 0 31 chr20 17271386 17271450 -49396555 - MIR SINE MIR -167 95 34 224 122 24 0 chr20 17273065 17273106 -49394899 + (TCCA)n Simple_repeat Simple_repeat 3 44 0 1096 231 77 89 chr20 17273261 17273360 -49394645 + MLT1F1 LTR MaLR 3 102 -465 2100 109 0 3 chr20 17273360 17273669 -49394336 - AluSg SINE Alu 0 308 1 1096 231 77 89 chr20 17273669 17274127 -49393878 + MLT1F1 LTR MaLR 102 554 -13 573 259 40 70 chr20 17274815 17275213 -49392792 - L1MC4 LINE L1 -122 7920 7535 288 229 10 0 chr20 17275219 17275315 -49392690 + (TAAA)n Simple_repeat Simple_repeat 2 98 0 667 286 27 46 chr20 17275336 17275706 -49392299 - L1MC4 LINE L1 -530 7512 7150 362 259 161 35 chr20 17275725 17275899 -49392106 - MIR SINE MIR -37 225 30 404 324 67 78 chr20 17276090 17276463 -49391542 - HAL1 LINE L1 -2115 392 24 1848 130 38 3 chr20 17276572 17276865 -49391140 + AluJb SINE Alu 1 303 -9 783 320 59 20 chr20 17277590 17277980 -49390025 + LTR16C LTR ERVL 87 491 0 453 241 84 30 chr20 17278130 17278296 -49389709 - L2 LINE L2 -14 3299 3125 233 280 20 0 chr20 17278344 17278394 -49389611 + L2 LINE L2 3191 3241 -31 1643 168 10 36 chr20 17278396 17278705 -49389300 - AluJb SINE Alu -11 301 1 182 356 100 30 chr20 17278893 17279163 -49388842 - L2 LINE L2 -554 2760 2472 24 53 0 0 chr20 17279522 17279560 -49388445 + AT_rich Low_complexity Low_complexity 1 38 0 1510 75 65 0 chr20 17280629 17280854 -49387151 + AluY SINE Alu 94 331 0 242 309 64 0 chr20 17282943 17283037 -49384968 - MIR SINE MIR -13 249 150 583 75 0 0 chr20 17283359 17283439 -49384566 + MADE1 DNA Mariner 1 80 0 2340 40 4 0 chr20 17283956 17284228 -49383777 + AluY SINE Alu 35 307 -4 382 300 39 23 chr20 17285201 17285331 -49382674 + MIR SINE MIR 47 178 -84 1919 161 6 6 chr20 17285456 17285767 -49382238 + AluSx SINE Alu 1 311 -1 626 267 49 21 chr20 17289643 17289969 -49378036 - L1MC4 LINE L1 0 8042 7708 944 161 161 20 chr20 17290586 17290785 -49377220 - AluJo SINE Alu -7 305 79 231 316 20 20 chr20 17290920 17291018 -49376987 + MIR3 SINE MIR 100 197 -11 2060 113 0 45 chr20 17291177 17291486 -49376519 + AluSx SINE Alu 1 295 -17 24 32 0 0 chr20 17292208 17292239 -49375766 + AT_rich Low_complexity Low_complexity 1 31 0 820 264 80 17 chr20 17292682 17292981 -49375024 - MER102a DNA MER1_type -12 318 1 235 276 29 29 chr20 17293314 17293419 -49374586 - MLT1I LTR MaLR 0 409 305 297 284 11 11 chr20 17293566 17293654 -49374351 - MLT1J1 LTR MaLR -290 156 69 1822 168 53 30 chr20 17294247 17294681 -49373324 - L1MA8 LINE L1 -4 6287 5844 2230 132 13 106 chr20 17294765 17295303 -49372702 - L1MA8 LINE L1 -432 5859 5372 629 302 90 17 chr20 17295437 17295791 -49372214 - MLT1K LTR MaLR -15 573 194 180 111 0 0 chr20 17295857 17295884 -49372121 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 24 53 0 0 chr20 17296480 17296518 -49371487 + AT_rich Low_complexity Low_complexity 1 38 0 202 125 12 62 chr20 17300346 17300426 -49367579 + (TGAA)n Simple_repeat Simple_repeat 2 77 0 661 243 62 37 chr20 17300656 17300899 -49367106 - L1ME3A LINE L1 0 6170 5922 341 251 25 108 chr20 17301086 17301289 -49366716 - L1ME1 LINE L1 -17 6149 5964 824 231 57 38 chr20 17302169 17302485 -49365520 - L1MC5 LINE L1 -30 7931 7610 543 296 65 22 chr20 17303254 17303484 -49364521 + MIR SINE MIR 15 254 -8 719 267 51 28 chr20 17303519 17303798 -49364207 + L1ME3A LINE L1 5885 6169 -1 502 320 19 22 chr20 17305140 17305508 -49362497 + L2 LINE L2 1406 1864 -1450 181 271 119 0 chr20 17305510 17305569 -49362436 + L2 LINE L2 2393 2458 -856 2112 223 87 31 chr20 17305602 17306212 -49361793 - LTR48B LTR ERV1 0 644 1 619 233 308 59 chr20 17306407 17306815 -49361190 - LTR50 LTR ERVL -41 754 449 2070 128 0 0 chr20 17306815 17307111 -49360894 + AluSx SINE Alu 1 296 -16 619 233 308 59 chr20 17307111 17307277 -49360728 - LTR50 LTR ERVL -346 449 37 2022 125 30 13 chr20 17308610 17308914 -49359091 - AluSx SINE Alu -3 309 1 407 310 49 27 chr20 17309086 17309270 -49358735 + MER5A DNA MER1_type 2 189 0 1094 296 46 36 chr20 17310054 17310163 -49357842 + LTR16C LTR ERVL 1 107 -384 2252 110 3 3 chr20 17310163 17310471 -49357534 - AluSg SINE Alu -2 308 1 1094 296 46 36 chr20 17310471 17310837 -49357168 + LTR16C LTR ERVL 107 481 -10 885 219 10 42 chr20 17311136 17311328 -49356677 - MER5A DNA MER1_type -3 186 1 442 281 94 104 chr20 17311683 17312019 -49355986 + L1M4 LINE L1 4254 4592 -1554 2758 89 14 0 chr20 17312019 17312369 -49355636 - THE1A LTR MaLR 0 355 1 12692 93 1 5 chr20 17312369 17313956 -49354049 - THE1A-int LTR MaLR 0 1580 1 3047 65 3 0 chr20 17313956 17314310 -49353695 - THE1A LTR MaLR 0 355 1 442 281 94 104 chr20 17314310 17314353 -49353652 + L1M4 LINE L1 4590 4632 -1514 3147 131 39 2 chr20 17314353 17314840 -49353165 - L1MC1 LINE L1 -18 6315 5811 442 281 94 104 chr20 17314840 17315054 -49352951 + L1M4 LINE L1 4632 4844 -1302 22 35 0 0 chr20 17315065 17315094 -49352911 + AT_rich Low_complexity Low_complexity 1 29 0 379 302 28 0 chr20 17315285 17315391 -49352614 - MIR SINE MIR -65 143 35 1927 138 40 0 chr20 17315576 17316010 -49351995 + AluSx SINE Alu 1 446 0 270 0 0 0 chr20 17316562 17316592 -49351413 + (A)n Simple_repeat Simple_repeat 1 30 0 705 288 30 26 chr20 17317016 17317249 -49350756 + MIR SINE MIR 16 249 -13 183 205 0 0 chr20 17319187 17319226 -49348779 + CT-rich Low_complexity Low_complexity 2 40 0 313 286 0 71 chr20 17319456 17319554 -49348451 - L1ME LINE L1 -547 5574 5484 311 333 84 51 chr20 17319602 17319935 -49348070 - L1ME LINE L1 -944 5202 4859 993 169 33 0 chr20 17320085 17320268 -49347737 + L1MB2 LINE L1 5981 6169 -2 923 230 134 18 chr20 17320333 17320767 -49347238 + L1ME4a LINE L1 5553 6036 -85 271 357 42 0 chr20 17320879 17321022 -49346983 - MIR SINE MIR -2 260 112 2231 102 0 3 chr20 17322772 17323067 -49344938 + AluSx SINE Alu 1 294 -18 551 196 27 0 chr20 17323789 17323901 -49344104 + MER53 DNA DNA 75 189 0 2286 53 3 46 chr20 17324074 17324376 -49343629 + AluSc SINE Alu 1 289 -20 307 194 233 10 chr20 17324498 17324601 -49343404 + MIR SINE MIR 72 197 -65 2305 98 0 0 chr20 17326722 17327017 -49340988 + AluY SINE Alu 1 295 -16 1047 318 41 6 chr20 17327151 17327491 -49340514 + LTR16A LTR ERVL 96 447 -3 2114 105 16 33 chr20 17328193 17328498 -49339507 + AluSx SINE Alu 1 300 -12 255 322 136 8 chr20 17329346 17329464 -49338541 + MER5B DNA MER1_type 44 176 -2 324 0 0 0 chr20 17330429 17330465 -49337540 + (TG)n Simple_repeat Simple_repeat 2 37 0 284 362 55 12 chr20 17331270 17331433 -49336572 + L2 LINE L2 2866 3035 -237 2395 93 3 0 chr20 17331696 17331997 -49336008 + AluSp SINE Alu 1 302 -11 762 206 0 0 chr20 17332011 17332142 -49335863 + FLAM_C SINE Alu 3 133 -10 245 394 11 0 chr20 17332147 17332241 -49335764 - MIR SINE MIR -79 129 35 2309 107 0 0 chr20 17332501 17332809 -49335196 - AluSx SINE Alu -4 308 1 1300 258 59 19 chr20 17335232 17335654 -49332351 - MLT1C LTR MaLR -28 439 1 225 0 0 0 chr20 17335967 17335992 -49332013 + (T)n Simple_repeat Simple_repeat 1 25 0 448 293 56 56 chr20 17336110 17336325 -49331680 - MIR SINE MIR -12 250 36 307 332 129 20 chr20 17338520 17338722 -49329283 - MIR SINE MIR -26 236 13 2306 110 0 3 chr20 17341071 17341379 -49326626 - AluSx SINE Alu -5 307 1 306 235 0 49 chr20 17342618 17342699 -49325306 - L2 LINE L2 0 3313 3237 198 0 0 0 chr20 17343071 17343093 -49324912 + (T)n Simple_repeat Simple_repeat 1 22 0 4693 117 28 20 chr20 17343721 17344407 -49323598 - LTR8 LTR ERV1 0 691 1 187 316 18 0 chr20 17344986 17345043 -49322962 - L2 LINE L2 -663 2651 2594 248 291 106 20 chr20 17345409 17345560 -49322445 + MIR SINE MIR 99 262 0 21 36 0 0 chr20 17345611 17345639 -49322366 + AT_rich Low_complexity Low_complexity 1 28 0 228 35 0 0 chr20 17345747 17345776 -49322229 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 25 0 0 0 chr20 17346437 17346462 -49321543 + AT_rich Low_complexity Low_complexity 1 25 0 354 264 0 0 chr20 17347306 17347378 -49320627 + Tigger7 DNA MER2_type 1 72 -661 1679 157 26 4 chr20 17347381 17347649 -49320356 - Tigger7 DNA MER2_type -203 347 74 2130 105 65 12 chr20 17347650 17347974 -49320031 + Tigger7 DNA MER2_type 2147 2487 0 738 92 23 0 chr20 17348648 17348778 -49319227 + (TCTA)n Simple_repeat Simple_repeat 2 134 0 2269 214 52 58 chr20 17348853 17349410 -49318595 - MLT2B3 LTR ERVL 0 554 1 999 220 17 60 chr20 17349516 17349748 -49318257 + MER58A DNA MER1_type 3 224 0 225 0 0 0 chr20 17350879 17350904 -49317101 + (A)n Simple_repeat Simple_repeat 1 25 0 612 278 27 11 chr20 17351148 17351335 -49316670 + L3b LINE CR1 1302 1491 -92 263 240 0 0 chr20 17351450 17351500 -49316505 - L2 LINE L2 -8 3305 3256 2144 111 0 34 chr20 17351552 17351849 -49316156 + AluSx SINE Alu 5 291 -21 180 0 0 0 chr20 17352204 17352224 -49315781 + (A)n Simple_repeat Simple_repeat 1 20 0 3116 134 148 25 chr20 17352305 17352952 -49315053 - LTR8A LTR ERV1 0 727 1 502 282 72 6 chr20 17353222 17353403 -49314602 - MIR SINE MIR -56 206 14 1254 232 32 6 chr20 17353488 17353803 -49314202 - MLT1H1 LTR MaLR 0 555 233 1639 198 88 24 chr20 17353805 17354270 -49313735 - L1ME3A LINE L1 -217 5953 5459 247 327 47 37 chr20 17355427 17355534 -49312471 + L2 LINE L2 3116 3223 -49 663 256 0 0 chr20 17356693 17356826 -49311179 - MER5B DNA MER1_type 0 178 46 2180 97 0 79 chr20 17356831 17357171 -49310834 + AluSq SINE Alu 1 313 0 23 0 0 0 chr20 17357176 17357199 -49310806 + AT_rich Low_complexity Low_complexity 1 23 0 362 298 60 60 chr20 17357264 17357415 -49310590 - L2 LINE L2 0 3272 3122 657 239 0 0 chr20 17357762 17357942 -49310063 + CT-rich Low_complexity Low_complexity 1 180 0 24 32 0 0 chr20 17358195 17358226 -49309779 + AT_rich Low_complexity Low_complexity 1 31 0 244 337 33 0 chr20 17359758 17359850 -49308155 + LTR67 LTR ERVL 101 195 -362 266 354 50 10 chr20 17360240 17360339 -49307666 - MIR SINE MIR -136 126 24 2008 131 33 12 chr20 17360385 17360721 -49307284 + L1PA16 LINE L1 5815 6157 -9 2274 114 0 13 chr20 17360761 17361119 -49306886 + AluSx SINE Alu 1 354 0 459 291 139 12 chr20 17362129 17362301 -49305704 + MIR SINE MIR 16 209 -53 498 294 0 3 chr20 17364766 17365058 -49302947 + GA-rich Low_complexity Low_complexity 1 290 0 195 245 0 31 chr20 17365077 17365175 -49302830 + GA-rich Low_complexity Low_complexity 2 96 0 338 279 16 0 chr20 17365221 17365343 -49302662 + GA-rich Low_complexity Low_complexity 1 124 0 21 0 0 0 chr20 17366735 17366756 -49301249 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr20 17367573 17367617 -49300388 + (CA)n Simple_repeat Simple_repeat 2 45 0 285 75 0 0 chr20 17367729 17367769 -49300236 + (TG)n Simple_repeat Simple_repeat 1 40 0 666 370 80 8 chr20 17368156 17368632 -49299373 + L2 LINE L2 2804 3313 0 210 274 14 14 chr20 17368656 17368729 -49299276 - MIR SINE MIR -44 218 146 320 178 33 33 chr20 17368738 17368828 -49299177 - MLT1J LTR MaLR -7 504 415 421 285 121 32 chr20 17368864 17369113 -49298892 - MLT1J LTR MaLR -202 309 39 229 276 13 26 chr20 17369136 17369212 -49298793 - MIR SINE MIR -83 125 51 276 276 32 77 chr20 17369512 17369668 -49298337 - MIR SINE MIR -14 248 100 2223 115 3 0 chr20 17369668 17369964 -49298041 - AluSq SINE Alu -16 297 1 489 280 39 50 chr20 17371395 17371513 -49296492 - MIR SINE MIR -60 202 85 2208 104 23 49 chr20 17371513 17371898 -49296107 + THE1C LTR MaLR 1 375 0 489 280 39 50 chr20 17371898 17371961 -49296044 - MIR SINE MIR -177 85 23 308 381 57 36 chr20 17372161 17372408 -49295597 - L2 LINE L2 -205 3067 2816 259 237 0 0 chr20 17372457 17372516 -49295489 + Charlie7 DNA MER1_type 43 101 -2511 2218 107 3 17 chr20 17372698 17372997 -49295008 - AluSx SINE Alu -15 297 3 554 288 176 21 chr20 17373267 17373642 -49294363 + L2 LINE L2 2863 3295 -18 422 114 14 0 chr20 17373659 17373729 -49294276 + (TGGA)n Simple_repeat Simple_repeat 4 74 0 358 253 31 49 chr20 17373881 17374043 -49293962 - MLT1K LTR MaLR -34 554 396 546 91 0 0 chr20 17374043 17374120 -49293885 + (TCCCC)n Simple_repeat Simple_repeat 5 81 0 * 690 80 18 9 chr20 17374117 17374229 -49293776 + (TTTC)n Simple_repeat Simple_repeat 2 114 0 242 304 0 25 chr20 17374626 17374705 -49293300 - MLT1L LTR MaLR -414 201 125 433 303 6 69 chr20 17377693 17377868 -49290137 + MIR SINE MIR 59 222 -40 232 116 23 0 chr20 17379411 17379454 -49288551 - HSMAR1 DNA Mariner 0 1287 1244 398 69 17 0 chr20 17380081 17380139 -49287866 + (TG)n Simple_repeat Simple_repeat 2 60 0 213 179 38 19 chr20 17381997 17382103 -49285902 + GA-rich Low_complexity Low_complexity 1 108 0 2134 104 3 3 chr20 17382686 17382975 -49285030 + AluSq SINE Alu 1 289 -24 30 27 0 0 chr20 17383088 17383125 -49284880 + AT_rich Low_complexity Low_complexity 1 37 0 186 189 0 0 chr20 17383179 17383216 -49284789 + T-rich Low_complexity Low_complexity 1 37 0 261 0 0 0 chr20 17384280 17384309 -49283696 + (T)n Simple_repeat Simple_repeat 1 29 0 374 200 25 0 chr20 17384550 17384630 -49283375 + MER20 DNA MER1_type 42 123 -96 829 133 12 40 chr20 17384630 17384831 -49283174 - MSTB1 LTR MaLR 0 432 262 478 286 45 30 chr20 17384954 17385087 -49282918 + L2 LINE L2 3136 3270 -2 1015 215 9 27 chr20 17386064 17386186 -49281819 + MER20 DNA MER1_type 1 119 -100 1965 194 28 31 chr20 17386186 17386644 -49281361 - MSTB2 LTR MaLR 0 457 1 1015 215 9 27 chr20 17386644 17386744 -49281261 + MER20 DNA MER1_type 119 219 0 195 296 49 12 chr20 17386756 17386837 -49281168 + MIR SINE MIR 118 201 -61 273 356 76 0 chr20 17387161 17387279 -49280726 + MER5A DNA MER1_type 7 133 -56 318 278 72 0 chr20 17387327 17387424 -49280581 + L2 LINE L2 3192 3295 -18 311 203 103 128 chr20 17387984 17388208 -49279797 - Charlie8 DNA MER1_type -3 1414 1186 2030 145 3 3 chr20 17388208 17388511 -49279494 - AluSx SINE Alu -9 303 1 311 203 103 128 chr20 17388511 17388565 -49279440 - Charlie8 DNA MER1_type -231 1186 59 316 250 121 0 chr20 17389429 17389553 -49278452 - MLT1H LTR MaLR 0 549 411 299 248 17 34 chr20 17389793 17389910 -49278095 - MLT1H LTR MaLR -412 137 23 294 247 93 0 chr20 17390005 17390102 -49277903 + MER113 DNA MER1_type? 306 411 -110 369 214 128 26 chr20 17391621 17391738 -49276267 - L2 LINE L2 -1 3312 3184 467 269 83 84 chr20 17391862 17392028 -49275977 - L1MC4 LINE L1 -2 8040 7875 2178 163 56 12 chr20 17392028 17392438 -49275567 + MSTA LTR MaLR 1 428 0 444 62 0 0 chr20 17392438 17392502 -49275503 + (TCTA)n Simple_repeat Simple_repeat 4 67 0 467 269 83 84 chr20 17392502 17392949 -49275056 - L1MC4 LINE L1 -166 7876 7430 2126 120 0 23 chr20 17392949 17393257 -49274748 + AluSx SINE Alu 4 304 -8 2251 110 0 13 chr20 17393258 17393566 -49274439 + AluSx SINE Alu 2 305 -7 467 269 83 84 chr20 17393566 17393895 -49274110 - L1MC4 LINE L1 -611 7431 7095 248 265 73 0 chr20 17394017 17394085 -49273920 - MIR3 SINE MIR -21 187 115 671 219 110 0 chr20 17394868 17395032 -49272973 - MIR SINE MIR -10 252 71 192 299 122 56 chr20 17395783 17395890 -49272115 + MIR SINE MIR 19 132 -76 546 259 180 53 chr20 17395942 17396414 -49271591 - MLT1H LTR MaLR 0 549 18 342 0 0 0 chr20 17397324 17397362 -49270643 + (CA)n Simple_repeat Simple_repeat 2 39 0 204 40 0 0 chr20 17397368 17397393 -49270612 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 644 271 133 52 chr20 17397417 17397751 -49270254 + MLT1K LTR MaLR 2 394 -194 2404 101 49 9 chr20 17397751 17398099 -49269906 + THE1B LTR MaLR 1 362 -2 644 271 133 52 chr20 17398099 17398284 -49269721 + MLT1K LTR MaLR 394 563 -25 539 181 245 0 chr20 17398806 17398961 -49269044 + MER3 DNA MER1_type 9 201 -8 308 252 259 7 chr20 17398991 17399126 -49268879 - MER5A DNA MER1_type -6 183 15 184 284 95 77 chr20 17399102 17399387 -49268618 - L2 LINE L2 -91 3222 2933 * 422 49 16 0 chr20 17399694 17399755 -49268250 + (TG)n Simple_repeat Simple_repeat 2 63 0 414 0 0 0 chr20 17402636 17402682 -49265323 + (CCAA)n Simple_repeat Simple_repeat 2 47 0 2179 98 7 0 chr20 17402762 17403049 -49264956 + AluSc SINE Alu 1 289 -20 251 337 0 23 chr20 17403103 17403189 -49264816 - MIR SINE MIR -153 109 26 910 188 0 0 chr20 17403195 17403339 -49264666 + FRAM SINE Alu 1 144 -32 2099 53 0 0 chr20 17403339 17403582 -49264423 - AluY SINE Alu -16 295 53 24 0 0 0 chr20 17403595 17403619 -49264386 + AT_rich Low_complexity Low_complexity 1 24 0 534 212 53 71 chr20 17403791 17403930 -49264075 + MER63 DNA MER1_type 652 792 -896 2328 117 0 0 chr20 17403930 17404229 -49263776 + AluSx SINE Alu 1 299 -13 534 212 53 71 chr20 17404229 17404276 -49263729 + MER63 DNA MER1_type 792 1688 0 627 246 145 39 chr20 17404399 17404924 -49263081 + MLT1G LTR MaLR 1 588 -2 2260 118 0 3 chr20 17408550 17408855 -49259150 - AluSx SINE Alu -8 304 1 24 53 0 0 chr20 17408873 17408911 -49259094 + AT_rich Low_complexity Low_complexity 1 38 0 21 71 0 0 chr20 17409997 17410039 -49257966 + AT_rich Low_complexity Low_complexity 1 42 0 21 36 0 0 chr20 17410095 17410123 -49257882 + AT_rich Low_complexity Low_complexity 1 28 0 365 292 101 112 chr20 17410558 17410986 -49257019 + L2 LINE L2 2837 3259 -13 2391 99 0 0 chr20 17411566 17411869 -49256136 + AluSx SINE Alu 1 303 -9 186 143 0 0 chr20 17411968 17412003 -49256002 + (T)n Simple_repeat Simple_repeat 1 35 0 460 283 88 18 chr20 17412106 17412262 -49255743 + MIR SINE MIR 49 216 -46 197 33 33 0 chr20 17412262 17412292 -49255713 + (TA)n Simple_repeat Simple_repeat 1 31 0 460 283 88 18 chr20 17412292 17412334 -49255671 + MIR SINE MIR 216 254 -8 614 335 64 45 chr20 17413917 17413997 -49254008 - L2 LINE L2 -12 3301 3224 2228 115 0 0 chr20 17413997 17414293 -49253712 + AluSq SINE Alu 1 296 -17 614 335 64 45 chr20 17414293 17414695 -49253310 - L2 LINE L2 -89 3224 2810 984 303 85 60 chr20 17414956 17415590 -49252415 - L2 LINE L2 -492 2822 2173 284 313 69 38 chr20 17415914 17416074 -49251931 - MIR SINE MIR -70 192 28 254 341 102 12 chr20 17416129 17416296 -49251709 + MIR SINE MIR 6 187 -75 464 270 38 54 chr20 17416335 17416520 -49251485 - L2 LINE L2 0 3313 3132 267 180 0 0 chr20 17416587 17416637 -49251368 + MIR SINE MIR 180 229 -33 194 274 20 0 chr20 17417149 17417200 -49250805 + L2 LINE L2 3221 3272 0 1787 162 141 11 chr20 17417783 17418160 -49249845 + MSTA LTR MaLR 1 426 -2 22 35 0 0 chr20 17418670 17418699 -49249306 + AT_rich Low_complexity Low_complexity 1 29 0 14352 189 18 11 chr20 17418699 17420371 -49247634 - L1PB1 LINE L1 -5 6862 5203 2291 107 0 10 chr20 17420371 17420680 -49247325 - AluSg SINE Alu 0 310 5 14352 189 18 11 chr20 17420680 17424563 -49243442 - L1PB1 LINE L1 -1664 5203 1113 1312 260 102 21 chr20 17424568 17425245 -49242760 - L1PB1 LINE L1 -6126 737 6 202 337 0 54 chr20 17425599 17425691 -49242314 + MIR3 SINE MIR 91 177 -31 282 243 72 4 chr20 17425902 17426035 -49241970 - MER5A DNA MER1_type -1 188 1 731 206 82 0 chr20 17426053 17426223 -49241782 + MER58A DNA MER1_type 1 184 -40 5334 126 40 3 chr20 17426649 17427486 -49240519 - L1PA16 LINE L1 -17 6149 5276 195 42 0 0 chr20 17427486 17427510 -49240495 + (TTG)n Simple_repeat Simple_repeat 1 24 0 5334 126 40 3 chr20 17427510 17427715 -49240290 - L1PA16 LINE L1 -890 5276 5080 2156 172 9 28 chr20 17427732 17428198 -49239807 + L1PA16 LINE L1 4615 5071 -1075 862 240 116 95 chr20 17428522 17429038 -49238967 - MLT1F LTR MaLR -2 540 14 282 56 0 0 chr20 17429108 17429144 -49238861 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 496 243 135 0 chr20 17429508 17429669 -49238336 - MER5A DNA MER1_type 0 189 4 586 270 37 5 chr20 17430167 17430332 -49237673 + MER5B DNA MER1_type 18 176 -2 1870 134 43 0 chr20 17430404 17430681 -49237324 - AluSx SINE Alu -21 291 3 532 309 0 0 chr20 17431198 17431337 -49236668 + MIR3 SINE MIR 38 176 -32 270 316 13 0 chr20 17431571 17431650 -49236355 - MIR3 SINE MIR -31 177 98 572 279 63 84 chr20 17432337 17432477 -49235528 - L2 LINE L2 -10 3303 3162 2026 132 3 7 chr20 17432477 17432781 -49235224 + AluSx SINE Alu 1 303 -9 572 279 63 84 chr20 17432781 17433034 -49234971 - L2 LINE L2 -151 3162 2918 26 0 0 0 chr20 17433107 17433133 -49234872 + AT_rich Low_complexity Low_complexity 1 26 0 636 258 175 40 chr20 17433177 17433549 -49234456 - L2 LINE L2 -86 3227 2806 820 173 13 27 chr20 17433568 17433718 -49234287 + AluJo SINE Alu 1 148 -164 1697 175 32 4 chr20 17433719 17433999 -49234006 + AluJo SINE Alu 1 288 -24 2021 148 0 20 chr20 17434354 17434659 -49233346 + AluJo SINE Alu 1 299 -13 1514 157 70 12 chr20 17434662 17434993 -49233012 - L1MA5 LINE L1 -25 6275 5926 1491 130 26 39 chr20 17434990 17435297 -49232708 + L1M2 LINE L1 5302 5604 -693 * 636 210 176 0 chr20 17437142 17437318 -49230687 - MER58A DNA MER1_type 0 224 18 211 370 50 28 chr20 17437767 17437948 -49230057 - MIR SINE MIR -50 212 28 2006 132 146 13 chr20 17438325 17438512 -49229493 - MSTA LTR MaLR 0 428 267 204 40 0 0 chr20 17438512 17438537 -49229468 + (GA)n Simple_repeat Simple_repeat 1 25 0 2006 132 146 13 chr20 17438537 17438727 -49229278 - MSTA LTR MaLR -161 267 1 477 50 0 0 chr20 17438948 17439008 -49228997 + (CA)n Simple_repeat Simple_repeat 2 61 0 181 164 0 33 chr20 17439776 17439837 -49228168 + (TA)n Simple_repeat Simple_repeat 1 59 0 304 291 30 45 chr20 17440735 17440869 -49227136 - MIR SINE MIR -13 249 118 21 36 0 0 chr20 17441128 17441156 -49226849 + AT_rich Low_complexity Low_complexity 1 28 0 642 246 120 20 chr20 17442530 17442877 -49225128 - L2 LINE L2 -1145 2169 1718 1853 115 115 0 chr20 17442985 17443264 -49224741 - AluSx SINE Alu -1 311 1 21 0 0 0 chr20 17444613 17444634 -49223371 + AT_rich Low_complexity Low_complexity 1 21 0 4449 141 4 1 chr20 17444634 17445372 -49222633 - L1MA6 LINE L1 -3 6297 5558 364 273 159 11 chr20 17446449 17446625 -49221380 - L1ME4a LINE L1 -5 6116 5915 1007 306 45 26 chr20 17446922 17447961 -49220044 - L1ME4a LINE L1 -222 5948 4888 5669 201 30 12 chr20 17448099 17449776 -49218229 - L1MC1 LINE L1 -9 6324 4603 2503 77 0 0 chr20 17449776 17450087 -49217918 + AluY SINE Alu 1 311 0 5669 201 30 12 chr20 17450087 17450703 -49217302 - L1MC1 LINE L1 -1730 4603 3999 22 0 0 0 chr20 17450801 17450823 -49217182 + AT_rich Low_complexity Low_complexity 1 22 0 324 106 30 15 chr20 17450823 17450889 -49217116 - L1PA15 LINE L1 -4 6812 6746 16695 204 22 13 chr20 17450947 17454807 -49213198 - L1PA15 LINE L1 -52 6764 2939 2223 108 7 0 chr20 17454807 17455103 -49212902 - AluSq SINE Alu -15 298 1 16695 204 22 13 chr20 17455103 17456720 -49211285 - L1PA15 LINE L1 -3877 2939 1203 2374 106 0 0 chr20 17456720 17457031 -49210974 - AluSq SINE Alu -2 311 1 16695 204 22 13 chr20 17457031 17457191 -49210814 - L1PA15 LINE L1 -5613 1203 1046 2830 227 25 83 chr20 17457427 17458590 -49209415 - L1MC1 LINE L1 -2159 3987 2893 224 250 0 0 chr20 17458601 17458649 -49209356 - MIR SINE MIR -209 53 6 225 0 0 0 chr20 17459930 17459955 -49208050 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1909 142 7 0 chr20 17459962 17460236 -49207769 - AluSx SINE Alu -36 276 1 258 264 0 42 chr20 17460878 17460950 -49207055 - L2 LINE L2 -3 3310 3242 274 238 230 0 chr20 17461040 17461166 -49206839 + MIR SINE MIR 102 256 -6 183 319 0 0 chr20 17461353 17461400 -49206605 - L2 LINE L2 -218 3054 3008 338 219 0 16 chr20 17461640 17461704 -49206301 - MER2 DNA MER2_type -1 344 282 * 764 278 0 6 chr20 17461679 17461859 -49206146 - MER8 DNA MER2_type -60 179 1 225 358 181 4 chr20 17461983 17462226 -49205779 - L2 LINE L2 -724 2590 2305 254 296 35 78 chr20 17462383 17462498 -49205507 - L2 LINE L2 -2 3311 3202 516 50 38 0 chr20 17462835 17462915 -49205090 + (TGGA)n Simple_repeat Simple_repeat 4 86 0 1998 105 70 18 chr20 17462962 17463304 -49204701 + L1MA3 LINE L1 5929 6288 -17 244 352 127 35 chr20 17463895 17464352 -49203653 - L2 LINE L2 -601 2713 2215 185 385 0 0 chr20 17464882 17464934 -49203071 + L2 LINE L2 3198 3249 -23 874 287 70 9 chr20 17464939 17465310 -49202695 - MLT1J2 LTR MaLR -2 407 1 1419 299 76 50 chr20 17465528 17466068 -49201937 + L2 LINE L2 2232 2756 -557 2236 95 3 33 chr20 17466068 17466374 -49201631 - AluSc SINE Alu -12 297 1 1419 299 76 50 chr20 17466374 17466873 -49201132 + L2 LINE L2 2756 3313 0 228 67 0 0 chr20 17466895 17466925 -49201080 + (ATTG)n Simple_repeat Simple_repeat 2 31 0 313 366 57 32 chr20 17468510 17468791 -49199214 + L2 LINE L2 2825 3112 -160 313 256 48 77 chr20 17468817 17469024 -49198981 - L1ME3A LINE L1 0 6170 5970 419 0 0 19 chr20 17469669 17469721 -49198284 + (CA)n Simple_repeat Simple_repeat 2 52 0 533 77 0 0 chr20 17469810 17469888 -49198117 - L1PA5 LINE L1 0 6154 6077 553 293 86 21 chr20 17469974 17470254 -49197751 - L1ME3A LINE L1 -258 5912 5615 1096 276 131 41 chr20 17470453 17471749 -49196256 - L1ME3A LINE L1 -856 5290 3878 2771 242 37 6 chr20 17471772 17472428 -49195577 - MER76 LTR ERV -12 676 1 1047 253 23 10 chr20 17472571 17472871 -49195134 - L1M4 LINE L1 -1793 4353 4050 360 148 0 0 chr20 17473316 17473377 -49194628 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 324 380 9 0 chr20 17473844 17473952 -49194053 + MIR SINE MIR 38 146 -62 198 197 8 154 chr20 17474314 17474431 -49193574 + L2 LINE L2 3109 3208 -105 2243 199 8 73 chr20 17474745 17475812 -49192193 + L1MD3 LINE L1 4905 5545 -744 * 2737 190 55 35 chr20 17475525 17475889 -49192116 + L1MA6 LINE L1 5582 5937 -363 251 28 28 0 chr20 17475889 17475925 -49192080 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2737 190 55 35 chr20 17475925 17476265 -49191740 + L1MA6 LINE L1 5937 6300 0 207 0 0 0 chr20 17477269 17477292 -49190713 + (TTA)n Simple_repeat Simple_repeat 2 24 0 236 186 17 0 chr20 17477924 17477983 -49190022 + (TA)n Simple_repeat Simple_repeat 1 60 0 24 0 0 0 chr20 17478080 17478104 -49189901 + AT_rich Low_complexity Low_complexity 1 24 0 4717 126 24 1 chr20 17478104 17478828 -49189177 - L1PA16 LINE L1 -8 6158 5419 336 311 18 12 chr20 17478872 17479036 -49188969 + L1M4 LINE L1 2455 2619 -3527 1929 99 46 56 chr20 17479316 17479620 -49188385 + AluSx SINE Alu 1 301 -11 456 263 113 12 chr20 17479752 17479841 -49188164 - MER5A DNA MER1_type -7 182 103 2032 150 0 0 chr20 17479841 17480134 -49187871 - AluSx SINE Alu -19 293 1 456 263 113 12 chr20 17480134 17480204 -49187801 - MER5A DNA MER1_type -86 103 7 207 273 154 18 chr20 17480625 17480735 -49187270 + L2 LINE L2 3184 3308 -5 1459 195 71 55 chr20 17482556 17482920 -49185085 - MLT1A2 LTR MaLR 0 374 5 2177 109 3 3 chr20 17483210 17483513 -49184492 - AluSq SINE Alu -8 305 3 1890 142 0 16 chr20 17483515 17483818 -49184187 - AluJo SINE Alu -14 298 1 2242 115 3 0 chr20 17483843 17484148 -49183857 + AluSg1 SINE Alu 1 306 -3 2106 117 0 0 chr20 17486015 17486321 -49181684 - AluSx SINE Alu 0 306 1 228 200 0 0 chr20 17487099 17487149 -49180856 + (TAA)n Simple_repeat Simple_repeat 2 51 0 324 303 123 12 chr20 17487206 17487368 -49180637 - MIR SINE MIR -82 180 1 705 241 25 49 chr20 17487435 17487680 -49180325 + MLT1H LTR MaLR 41 279 -270 1806 281 82 24 chr20 17489360 17490128 -49177877 + L2 LINE L2 2305 3110 -203 319 241 24 0 chr20 17491726 17491809 -49176196 - MLT1H LTR MaLR -1 548 464 279 254 147 56 chr20 17491807 17492039 -49175966 - MLT1H LTR MaLR -225 324 72 * 533 365 11 0 chr20 17492283 17492461 -49175544 + MER91B DNA MER1_type 1 180 -10 336 64 0 0 chr20 17493088 17493135 -49174870 + (TG)n Simple_repeat Simple_repeat 2 48 0 6877 130 25 45 chr20 17493135 17494106 -49173899 - Tigger3b DNA MER2_type -1798 1230 288 2220 80 4 0 chr20 17494106 17494418 -49173587 - AluSx SINE Alu 0 317 5 6877 130 25 45 chr20 17494418 17494700 -49173305 - Tigger3b DNA MER2_type -2740 288 2 28 0 0 0 chr20 17495032 17495060 -49172945 + AT_rich Low_complexity Low_complexity 1 28 0 842 133 0 0 chr20 17495060 17495188 -49172817 - FRAM SINE Alu -2 174 47 189 357 194 0 chr20 17495368 17495466 -49172539 + MIR3 SINE MIR 87 203 -5 270 220 0 121 chr20 17495574 17495665 -49172340 - MLT1H LTR MaLR -1 548 469 227 270 124 0 chr20 17495834 17495923 -49172082 - MLT1I LTR MaLR -215 194 95 1766 183 0 26 chr20 17496152 17496458 -49171547 - AluJb SINE Alu -14 298 1 256 131 16 33 chr20 17496582 17496643 -49171362 + (TATG)n Simple_repeat Simple_repeat 4 63 0 2450 63 0 3 chr20 17496778 17497077 -49170928 + AluY SINE Alu 1 298 -13 252 0 0 0 chr20 17497077 17497105 -49170900 + (TA)n Simple_repeat Simple_repeat 2 29 0 340 279 195 32 chr20 17497265 17497419 -49170586 - MIR SINE MIR -48 214 36 770 202 119 125 chr20 17497528 17497731 -49170274 - THE1C LTR MaLR 0 375 173 588 130 0 0 chr20 17497731 17497823 -49170182 + L1PB1 LINE L1 6059 6150 -1 770 202 119 125 chr20 17497823 17497996 -49170009 - THE1C LTR MaLR -202 173 1 180 364 11 68 chr20 17498329 17498417 -49169588 + MIR SINE MIR 38 120 -88 2767 155 17 2 chr20 17499925 17500592 -49167413 - MER72 LTR ERV1 -4 718 10 286 265 10 10 chr20 17501030 17501128 -49166877 + Charlie8 DNA MER1_type 54 151 -2266 231 254 0 16 chr20 17502170 17502233 -49165772 + (TA)n Simple_repeat Simple_repeat 2 63 0 224 344 67 0 chr20 17502363 17502453 -49165552 - MIR3 SINE MIR -48 160 65 1095 69 0 0 chr20 17502470 17502615 -49165390 + (TTCC)n Simple_repeat Simple_repeat 4 148 0 2094 120 0 20 chr20 17502630 17502922 -49165083 - AluSx SINE Alu -22 290 5 227 309 0 0 chr20 17502925 17502980 -49165025 - MIR SINE MIR -138 70 16 481 317 70 33 chr20 17502988 17503231 -49164774 - MIR SINE MIR -8 254 3 204 67 0 0 chr20 17504603 17504633 -49163372 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 552 347 50 26 chr20 17505553 17505896 -49162109 - L2 LINE L2 -570 2744 2394 24 32 0 0 chr20 17506028 17506059 -49161946 + AT_rich Low_complexity Low_complexity 1 31 0 431 250 128 35 chr20 17506064 17506236 -49161769 - MIR SINE MIR -45 217 30 207 320 20 0 chr20 17506222 17506272 -49161733 - L2 LINE L2 -98 3174 3124 * 1256 176 80 96 chr20 17506365 17506729 -49161276 - MLT1A1 LTR MaLR -7 358 1 269 371 16 24 chr20 17506737 17506861 -49161144 - L2 LINE L2 -217 3055 2933 208 338 0 0 chr20 17507154 17507228 -49160777 + MIR SINE MIR 178 251 -11 693 281 90 58 chr20 17507231 17507665 -49160340 - MLT1H LTR MaLR 0 549 102 198 0 0 0 chr20 17507693 17507715 -49160290 + (A)n Simple_repeat Simple_repeat 1 22 0 2533 48 0 19 chr20 17509842 17510157 -49157848 + AluY SINE Alu 1 309 -2 186 43 0 0 chr20 17510240 17510263 -49157742 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 572 289 100 52 chr20 17511176 17511854 -49156151 + HAL1b LINE L1 105 815 -533 2146 104 3 0 chr20 17511938 17512227 -49155778 - AluSx SINE Alu -2 310 21 2260 107 28 6 chr20 17512281 17512637 -49155368 - L1PA16 LINE L1 -2 6164 5801 30 45 0 0 chr20 17512693 17512737 -49155268 + AT_rich Low_complexity Low_complexity 1 44 0 237 237 144 0 chr20 17512830 17512927 -49155078 + HAL1b LINE L1 1211 1321 -27 555 287 40 37 chr20 17514238 17514538 -49153467 + MARNA DNA Mariner 144 444 -142 427 309 100 61 chr20 17514568 17515079 -49152926 + L1ME LINE L1 3123 3653 -2493 307 339 48 12 chr20 17515254 17515419 -49152586 + L1ME LINE L1 4027 4197 -1949 348 267 55 20 chr20 17516581 17516727 -49151278 + L1ME LINE L1 4312 4462 -1684 356 311 102 20 chr20 17517099 17517343 -49150662 + L1ME LINE L1 4877 5140 -1006 549 287 88 55 chr20 17517443 17517854 -49150151 + L1ME LINE L1 5282 5706 -415 876 199 45 6 chr20 17518189 17518365 -49149640 - MER5A DNA MER1_type -5 184 2 292 179 24 49 chr20 17518764 17518887 -49149118 + (TTATA)n Simple_repeat Simple_repeat 1 120 0 33 43 0 0 chr20 17518899 17518946 -49149059 + AT_rich Low_complexity Low_complexity 1 47 0 23 0 0 0 chr20 17519271 17519294 -49148711 + AT_rich Low_complexity Low_complexity 1 23 0 340 281 52 10 chr20 17520039 17520135 -49147870 + MER91C DNA MER1_type 35 134 -6 183 311 176 25 chr20 17521485 17521604 -49146401 + MIR SINE MIR 14 150 -112 303 309 111 58 chr20 17521925 17522073 -49145932 - MLT1L LTR MaLR -42 573 434 210 37 0 0 chr20 17522073 17522100 -49145905 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2377 45 0 7 chr20 17522102 17522390 -49145615 - AluY SINE Alu -25 286 1 303 309 111 58 chr20 17522390 17522581 -49145424 - MLT1L LTR MaLR -181 434 213 * 340 210 32 0 chr20 17522556 17522618 -49145387 - MLT1J LTR MaLR -338 173 110 1069 189 22 0 chr20 17522717 17522902 -49145103 - MER5A DNA MER1_type 0 189 1 610 266 101 0 chr20 17522912 17523081 -49144924 - MER58A DNA MER1_type -10 214 29 1254 277 61 34 chr20 17523155 17523661 -49144344 - MLT1G1 LTR MaLR -75 520 1 4900 159 47 20 chr20 17524156 17525565 -49142440 - L1MA4 LINE L1 -6 6294 4845 5674 23 0 0 chr20 17525565 17526180 -49141825 + SVA Other Other 771 1385 -1 5429 179 20 5 chr20 17526470 17527542 -49140463 - L1MA4 LINE L1 -1286 4860 3773 3182 191 24 20 chr20 17527528 17528272 -49139733 + L1MA4 LINE L1 3035 3781 -2365 * 1332 292 51 22 chr20 17529727 17530138 -49137867 + LTR16C LTR ERVL 69 491 0 2422 80 3 0 chr20 17530451 17530751 -49137254 - AluSp SINE Alu -12 301 1 1131 203 62 3 chr20 17532461 17532767 -49135238 + MER33 DNA MER1_type 1 324 0 1712 187 114 26 chr20 17532809 17533231 -49134774 + LTR2B LTR ERV1 32 490 0 423 298 71 53 chr20 17534058 17534283 -49133722 + L2 LINE L2 2664 2892 -422 2295 181 19 7 chr20 17534308 17534733 -49133272 - MSTB1 LTR MaLR -2 430 1 7028 24 0 2 chr20 17534824 17534839 -49133166 + L1P1 LINE L1 4553 4567 -1588 5613 23 0 0 chr20 17534839 17535488 -49132517 - L1PA4 LINE L1 0 6155 5507 7028 24 0 2 chr20 17535488 17536424 -49131581 + L1PA4 LINE L1 4567 5502 -653 189 384 122 22 chr20 17536716 17536987 -49131018 - L2 LINE L2 -167 3105 2808 193 315 0 19 chr20 17537174 17537228 -49130777 + L2 LINE L2 3216 3268 -4 1787 169 0 14 chr20 17538471 17538761 -49129244 + AluJo SINE Alu 1 286 -26 209 281 18 0 chr20 17539042 17539099 -49128906 + GA-rich Low_complexity Low_complexity 3 60 0 1010 281 59 53 chr20 17539123 17539611 -49128394 + LTR16C LTR ERVL 1 491 0 213 235 20 20 chr20 17539820 17539871 -49128134 + L2 LINE L2 3217 3267 -5 212 215 0 31 chr20 17540984 17541049 -49126956 + (TCTCTG)n Simple_repeat Simple_repeat 4 66 0 3995 148 0 2 chr20 17543077 17543711 -49124294 - MER41B LTR ERV1 0 635 3 192 256 0 0 chr20 17543943 17543986 -49124019 - MIR SINE MIR -174 88 46 847 218 24 0 chr20 17543993 17544163 -49123842 + L1MA9 LINE L1 5612 5785 -527 593 163 9 14 chr20 17544169 17544529 -49123476 + (TA)n Simple_repeat Simple_repeat 1 357 0 1863 227 33 14 chr20 17544532 17545016 -49122989 + L1MA9 LINE L1 5782 6274 -38 1836 146 18 4 chr20 17545191 17545465 -49122540 - AluJb SINE Alu -32 280 3 368 222 148 0 chr20 17546010 17546118 -49121887 - L1M4 LINE L1 -885 5261 5138 35 24 0 0 chr20 17546340 17546382 -49121623 + AT_rich Low_complexity Low_complexity 1 42 0 1729 161 58 15 chr20 17546535 17546865 -49121140 - MER2 DNA MER2_type 0 344 1 414 0 0 0 chr20 17548251 17548297 -49119708 + (TG)n Simple_repeat Simple_repeat 2 47 0 222 128 0 0 chr20 17549233 17549272 -49118733 + (TG)n Simple_repeat Simple_repeat 2 40 0 251 257 114 9 chr20 17549754 17549859 -49118146 + L2 LINE L2 3156 3271 -1 476 276 201 11 chr20 17550112 17550380 -49117625 + MLT1G LTR MaLR 12 330 -260 737 129 0 0 chr20 17550463 17550579 -49117426 - AluY SINE Alu -1 310 195 236 155 86 17 chr20 17550580 17550638 -49117367 + MLT1G LTR MaLR 485 546 -9 217 371 40 33 chr20 17550924 17551075 -49116930 - L3 LINE CR1 -48 1529 1378 1363 141 47 0 chr20 17552989 17553245 -49114760 + L1MA7 LINE L1 6024 6291 0 382 322 89 8 chr20 17557328 17557564 -49110441 - LTR33A LTR ERVL -106 417 163 197 291 35 23 chr20 17557731 17557817 -49110188 + MER5B DNA MER1_type 88 174 -4 273 306 75 17 chr20 17558888 17559061 -49108944 + MIR3 SINE MIR 23 205 -3 1154 110 0 0 chr20 17559160 17559346 -49108659 + AluSg/x SINE Alu 128 313 0 1136 269 60 21 chr20 17559781 17560290 -49107715 + MLT1F LTR MaLR 1 567 0 21 95 0 0 chr20 17560570 17560633 -49107372 + AT_rich Low_complexity Low_complexity 1 63 0 320 251 66 3 chr20 17560649 17560748 -49107257 - MIR SINE MIR -62 146 48 291 284 39 10 chr20 17560790 17560892 -49107113 + MIR SINE MIR 122 226 -36 21 57 0 0 chr20 17561559 17561594 -49106411 + AT_rich Low_complexity Low_complexity 1 35 0 201 283 19 0 chr20 17564189 17564242 -49103763 + MIR SINE MIR 3 56 -206 284 316 14 22 chr20 17564341 17564480 -49103525 + MLT1H LTR MaLR 108 245 -304 586 287 15 26 chr20 17564842 17565037 -49102968 + MIR SINE MIR 70 262 0 2498 148 31 9 chr20 17566291 17566710 -49101295 - MSTA LTR MaLR 0 428 1 357 109 0 0 chr20 17567684 17567739 -49100266 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 190 343 30 75 chr20 17567937 17568071 -49099934 + MIR3 SINE MIR 4 131 -77 583 321 77 9 chr20 17569362 17569583 -49098422 - MIR SINE MIR -8 254 19 584 204 102 13 chr20 17570059 17570216 -49097789 + MLT1C LTR MaLR 6 176 -291 199 341 54 23 chr20 17570269 17570398 -49097607 + MER5A DNA MER1_type 54 186 -3 299 311 98 30 chr20 17570686 17570850 -49097155 - MIR SINE MIR 0 262 88 224 250 0 26 chr20 17572758 17572834 -49095171 + T-rich Low_complexity Low_complexity 4 77 0 222 37 0 0 chr20 17573138 17573165 -49094840 + (TC)n Simple_repeat Simple_repeat 1 27 0 195 100 0 0 chr20 17574073 17574103 -49093902 + (CA)n Simple_repeat Simple_repeat 1 30 0 398 169 0 0 chr20 17575042 17575107 -49092898 - LTR16C LTR ERVL -2 489 425 409 271 169 27 chr20 17575157 17575382 -49092623 - LTR16C LTR ERVL -158 333 77 637 268 69 50 chr20 17576050 17576237 -49091768 - LTR16A LTR ERVL -6 444 262 2204 172 8 5 chr20 17576237 17576626 -49091379 - MLT1B LTR MaLR 0 390 1 637 268 69 50 chr20 17576626 17576859 -49091146 - LTR16A LTR ERVL -188 262 16 1089 191 0 25 chr20 17577750 17577954 -49090051 + AluJo SINE Alu 84 282 -30 213 39 0 0 chr20 17577957 17577983 -49090022 + (TAA)n Simple_repeat Simple_repeat 2 27 0 215 276 35 0 chr20 17578172 17578230 -49089775 - MIR SINE MIR -6 256 197 2015 211 82 24 chr20 17578259 17578809 -49089196 + MLT1E3 LTR MaLR 2 583 -41 454 241 65 0 chr20 17578823 17578931 -49089074 - MIR SINE MIR -114 148 34 1327 247 88 88 chr20 17578944 17579591 -49088414 + MLT1E3 LTR MaLR 2 618 -6 2313 236 46 28 chr20 17580472 17581125 -49086880 - L1ME3A LINE L1 -5 6165 5501 300 258 0 0 chr20 17581544 17581606 -49086399 - L2 LINE L2 -17 3255 3194 519 266 40 6 chr20 17581990 17582167 -49085838 - MLT2E LTR ERVL -3 625 443 * 708 283 95 39 chr20 17582155 17582639 -49085366 - MLT2F LTR ERVL -93 570 60 239 346 70 12 chr20 17582678 17582841 -49085164 - MIR3 SINE MIR -5 203 33 342 207 171 0 chr20 17582902 17582984 -49085021 + FLAM_A SINE Alu 23 118 -15 380 248 106 10 chr20 17583687 17583823 -49084182 - MLT1G1 LTR MaLR -317 278 75 2619 117 33 2 chr20 17583831 17584257 -49083748 - Tigger2 DNA MER2_type 0 2718 2280 424 174 0 0 chr20 17584255 17584324 -49083681 - Tigger2 DNA MER2_type -2649 69 1 * 379 260 29 10 chr20 17584324 17584428 -49083577 - MLT1G1 LTR MaLR -489 106 1 1878 115 0 0 chr20 17584841 17585102 -49082903 + AluY SINE Alu 45 305 -6 265 232 0 0 chr20 17585139 17585195 -49082810 + (CA)n Simple_repeat Simple_repeat 1 56 0 21 57 0 0 chr20 17585536 17585571 -49082434 + AT_rich Low_complexity Low_complexity 1 35 0 1818 167 53 0 chr20 17585753 17586094 -49081911 - MER93b LTR ERV1 -14 359 1 253 242 0 22 chr20 17586132 17586224 -49081781 - L1ME3A LINE L1 -231 5939 5848 222 37 0 0 chr20 17587495 17587522 -49080483 + (CA)n Simple_repeat Simple_repeat 2 28 0 326 289 53 59 chr20 17587903 17588090 -49079915 + MIR3 SINE MIR 23 208 0 188 146 0 62 chr20 17588991 17589039 -49078966 + (TTCTCC)n Simple_repeat Simple_repeat 3 47 0 219 196 11 65 chr20 17590250 17590342 -49077663 + (TAA)n Simple_repeat Simple_repeat 2 88 0 231 271 34 34 chr20 17590348 17590466 -49077539 - MIR SINE MIR -2 260 143 3040 171 27 13 chr20 17590468 17591070 -49076935 + MER73 LTR ERVL 1 610 -34 1399 186 87 36 chr20 17591071 17591370 -49076635 + AluJo SINE Alu 1 313 0 308 87 0 0 chr20 17591407 17591453 -49076552 + MER73 LTR ERVL 599 644 0 1900 199 16 0 chr20 17591872 17592254 -49075751 - MLT1B LTR MaLR 0 390 3 929 150 52 56 chr20 17592826 17593039 -49074966 + MER20 DNA MER1_type 1 212 -7 1514 194 0 63 chr20 17593716 17594035 -49073970 - AluJo SINE Alu -13 299 1 207 0 0 0 chr20 17594154 17594177 -49073828 + (TA)n Simple_repeat Simple_repeat 2 24 0 * 252 0 0 0 chr20 17594176 17594204 -49073801 + (GA)n Simple_repeat Simple_repeat 2 29 0 29 47 0 0 chr20 17594330 17594373 -49073632 + AT_rich Low_complexity Low_complexity 1 43 0 306 0 0 0 chr20 17595171 17595205 -49072800 + (TTA)n Simple_repeat Simple_repeat 2 35 0 1167 212 166 14 chr20 17595364 17595708 -49072297 + MSTD LTR MaLR 1 396 0 2331 101 3 0 chr20 17595835 17596133 -49071872 + AluSg SINE Alu 1 299 -11 192 208 113 38 chr20 17596376 17596429 -49071576 - L2 LINE L2 -14 3299 3243 239 270 63 56 chr20 17596865 17596991 -49071014 - MIR SINE MIR -80 182 56 290 256 12 12 chr20 17597411 17597493 -49070512 + MIR SINE MIR 58 139 -123 440 240 153 63 chr20 17597818 17598118 -49069887 - L1ME4a LINE L1 -222 5899 5573 272 233 110 7 chr20 17598421 17598567 -49069438 - L1ME4a LINE L1 -798 5348 5188 240 184 0 0 chr20 17598621 17598670 -49069335 + GA-rich Low_complexity Low_complexity 3 51 0 5876 60 3 1 chr20 17598855 17599632 -49068373 - L1PA6 LINE L1 0 6154 5377 1675 193 49 65 chr20 17599676 17600188 -49067817 + MLT1D LTR MaLR 1 504 -1 321 89 0 0 chr20 17601031 17601076 -49066929 + (TA)n Simple_repeat Simple_repeat 1 45 0 6082 65 10 0 chr20 17601076 17601896 -49066109 - L1PA5 LINE L1 -6 6148 5321 312 307 99 36 chr20 17602115 17602307 -49065698 + L2 LINE L2 2247 2450 -864 735 221 147 0 chr20 17603308 17603471 -49064534 - MER5A DNA MER1_type 0 189 3 1831 217 45 75 chr20 17604618 17605153 -49062852 - MLT2B1 LTR ERVL 0 520 2 269 346 16 85 chr20 17605251 17605330 -49062675 + L2 LINE L2 2897 2980 -292 1370 250 70 62 chr20 17605330 17605814 -49062191 - LTR16C LTR ERVL 0 491 4 269 346 16 85 chr20 17605814 17606040 -49061965 + L2 LINE L2 2980 3181 -91 2876 177 45 111 chr20 17606130 17606908 -49061097 - LTR8A LTR ERV1 0 727 1 388 183 292 0 chr20 17606916 17607036 -49060969 - MIR SINE MIR -3 259 105 2370 220 58 9 chr20 17607045 17607582 -49060423 - LTR48B LTR ERV1 -2 642 80 242 290 11 54 chr20 17607617 17607710 -49060295 - MIR SINE MIR -163 99 11 198 91 0 0 chr20 17607983 17608016 -49059989 + (A)n Simple_repeat Simple_repeat 1 33 0 180 356 0 46 chr20 17608026 17608113 -49059892 + L2 LINE L2 3229 3311 -2 21 0 0 0 chr20 17608247 17608268 -49059737 + AT_rich Low_complexity Low_complexity 1 21 0 180 382 114 24 chr20 17608726 17608849 -49059156 - L2 LINE L2 -5 3267 3134 750 265 25 49 chr20 17608894 17609139 -49058866 - MIR SINE MIR 0 262 24 2245 164 19 6 chr20 17609684 17610044 -49057961 - MLT1A1 LTR MaLR 0 365 1 825 298 175 28 chr20 17611015 17611519 -49056486 - MLT1G1 LTR MaLR -17 578 1 342 268 153 20 chr20 17611664 17611864 -49056141 + MIR SINE MIR 38 259 -3 333 335 171 25 chr20 17611961 17612277 -49055728 - L3 LINE CR1 -24 1553 1192 835 313 151 14 chr20 17612379 17612609 -49055396 + LTR16C LTR ERVL 1 198 -293 1570 153 41 47 chr20 17612609 17612929 -49055076 - MER33 DNA MER1_type -4 320 3 835 313 151 14 chr20 17612929 17613130 -49054875 + LTR16C LTR ERVL 198 491 0 584 273 76 15 chr20 17614044 17614242 -49053763 + MER63A DNA MER1_type 1 210 0 415 281 261 10 chr20 17614245 17614444 -49053561 - MIR SINE MIR -6 256 8 1066 299 107 41 chr20 17615889 17616774 -49051231 - L2 LINE L2 -44 3269 2325 268 272 88 35 chr20 17616871 17616985 -49051020 - LTR33 LTR ERVL -167 354 235 518 143 61 10 chr20 17617050 17617148 -49050857 - LTR33 LTR ERVL -413 108 6 247 346 0 0 chr20 17617155 17617236 -49050769 - L2 LINE L2 -997 2317 2237 259 86 0 0 chr20 17618610 17618645 -49049360 - U2 snRNA snRNA -153 35 1 346 296 174 48 chr20 17618780 17619091 -49048914 - LTR16B LTR ERVL -81 383 34 1359 199 12 4 chr20 17620465 17620871 -49047134 - LTR32 LTR ERVL 0 471 15 614 289 116 20 chr20 17622084 17622673 -49045332 - L1MEd LINE L1 -4722 1588 895 437 287 98 0 chr20 17622694 17622868 -49045137 - L1MEd LINE L1 -5269 850 660 611 211 143 6 chr20 17623181 17623233 -49044772 + MER5A DNA MER1_type 2 46 -143 2232 95 0 3 chr20 17623233 17623527 -49044478 + AluSx SINE Alu 15 307 -5 611 211 143 6 chr20 17623527 17623635 -49044370 + MER5A DNA MER1_type 46 184 -5 393 220 6 39 chr20 17623806 17623988 -49044017 + (TA)n Simple_repeat Simple_repeat 2 177 0 268 303 11 0 chr20 17623990 17624079 -49043926 - L1MC4 LINE L1 -1339 6703 6614 225 245 20 51 chr20 17624055 17624153 -49043852 + L1MC4 LINE L1 6614 6708 -1334 * 229 250 0 0 chr20 17624162 17624210 -49043795 + L1MC4 LINE L1 6652 6699 -1343 252 241 0 0 chr20 17624236 17624294 -49043711 - L1MC4 LINE L1 -1337 6705 6648 33 43 0 0 chr20 17624849 17624896 -49043109 + AT_rich Low_complexity Low_complexity 1 47 0 375 264 47 23 chr20 17625579 17625708 -49042297 - MER94 DNA DNA -1 133 2 212 381 48 0 chr20 17625777 17625903 -49042102 + MIR SINE MIR 90 221 -41 1587 193 107 21 chr20 17626250 17626633 -49041372 + MER47B DNA MER2_type 1 416 -2 345 250 0 36 chr20 17626927 17627011 -49040994 + Charlie1 DNA MER1_type 2 82 -2679 234 281 7 126 chr20 17627163 17627298 -49040707 - L2 LINE L2 -3 3310 3192 501 246 45 0 chr20 17627394 17627528 -49040477 - MLT1F1 LTR MaLR -3 564 425 * 1269 225 55 7 chr20 17627525 17627814 -49040191 + MLT1F LTR MaLR 122 424 -118 1278 251 84 81 chr20 17627935 17628046 -49039959 - L2 LINE L2 -266 3047 2938 1402 112 241 0 chr20 17628046 17628287 -49039718 + AluSx SINE Alu 1 299 -3 1278 251 84 81 chr20 17628287 17628439 -49039566 - L2 LINE L2 -375 2938 2788 771 211 63 6 chr20 17628439 17628614 -49039391 - MER5A DNA MER1_type -4 185 1 1278 251 84 81 chr20 17628614 17628934 -49039071 - L2 LINE L2 -525 2788 2459 1025 106 0 0 chr20 17629139 17629271 -49038734 - FLAM_C SINE Alu -1 132 1 234 270 0 40 chr20 17629539 17629563 -49038442 + GA-rich Low_complexity Low_complexity 3 26 -47 2306 71 37 0 chr20 17629563 17629858 -49038147 + AluY SINE Alu 1 306 -5 234 270 0 40 chr20 17629858 17629907 -49038098 + GA-rich Low_complexity Low_complexity 26 73 0 290 238 24 12 chr20 17630118 17630202 -49037803 - MIR3 SINE MIR -1 207 123 234 179 18 0 chr20 17631280 17631336 -49036669 - L1MC4 LINE L1 0 8042 7986 2429 255 29 14 chr20 17631338 17631992 -49036013 - L1MC4 LINE L1 -141 7901 7238 300 221 0 0 chr20 17631996 17632064 -49035941 - L1MC4 LINE L1 -953 7089 7022 453 247 11 0 chr20 17632067 17632160 -49035845 - L1MC4a LINE L1 -1039 6769 6676 830 189 11 23 chr20 17632892 17633067 -49034938 - MER106A DNA MER1_type -1 235 63 873 267 121 23 chr20 17633143 17633491 -49034514 + LTR33 LTR ERVL 134 515 -6 943 248 149 78 chr20 17633911 17634427 -49033578 - MLT1G1 LTR MaLR -37 558 6 2819 16 0 0 chr20 17634465 17634772 -49033233 - AluYa5 SINE Alu -4 307 1 333 0 0 0 chr20 17635344 17635381 -49032624 + (TG)n Simple_repeat Simple_repeat 2 38 0 206 228 35 0 chr20 17635661 17635718 -49032287 + MER5B DNA MER1_type 118 176 -2 632 297 153 69 chr20 17635745 17636253 -49031752 - MLT1K LTR MaLR -7 581 31 1195 121 0 0 chr20 17636812 17636986 -49031019 + AluSp SINE Alu 140 313 0 22 0 0 0 chr20 17637761 17637783 -49030222 + AT_rich Low_complexity Low_complexity 1 22 0 361 229 280 25 chr20 17637875 17637993 -49030012 + MIR SINE MIR 2 149 -113 183 80 0 0 chr20 17638101 17638126 -49029879 + (TTA)n Simple_repeat Simple_repeat 2 26 0 287 321 9 9 chr20 17639418 17639524 -49028481 + MIR SINE MIR 117 222 -40 2721 229 34 81 chr20 17639552 17640407 -49027598 - MER21B LTR ERV1 -48 815 1 1136 229 32 45 chr20 17641170 17641484 -49026521 - MLT1F1 LTR MaLR -255 312 3 868 177 188 0 chr20 17641849 17642030 -49025975 - MER58C DNA MER1_type 0 215 1 2127 123 3 3 chr20 17644404 17644706 -49023299 + AluSg SINE Alu 1 302 -8 303 307 5 114 chr20 17646345 17646547 -49021458 + L2 LINE L2 2871 3050 -222 1221 269 46 19 chr20 17646671 17647039 -49020966 - LTR16C LTR ERVL -12 479 102 1276 199 60 35 chr20 17647192 17647508 -49020497 - MER33 DNA MER1_type 0 324 1 226 321 25 0 chr20 17647751 17647832 -49020173 + L2 LINE L2 3231 3313 0 2988 65 8 0 chr20 17648106 17648458 -49019547 - THE1A LTR MaLR 0 355 1 665 237 112 12 chr20 17648459 17648628 -49019377 + MER5A DNA MER1_type 1 186 -3 206 342 13 13 chr20 17650119 17650195 -49017810 + MIR SINE MIR 39 114 -94 897 285 115 57 chr20 17651300 17651969 -49016036 - L2 LINE L2 -1 3312 2580 220 304 109 0 chr20 17652211 17652303 -49015702 - L2 LINE L2 -13 3300 3199 416 226 43 11 chr20 17652384 17652477 -49015528 + MIR SINE MIR 46 141 -67 210 143 0 0 chr20 17652774 17652809 -49015196 + (TTCC)n Simple_repeat Simple_repeat 4 38 0 1057 206 105 49 chr20 17652906 17653192 -49014813 + L1MC4 LINE L1 7601 7902 -140 229 224 52 0 chr20 17653189 17653247 -49014758 + L1MC4a LINE L1 7748 7808 0 * 541 286 84 25 chr20 17653477 17653680 -49014325 + MIR SINE MIR 48 262 0 386 188 7 162 chr20 17653950 17654104 -49013901 - MLT1H1 LTR MaLR 0 549 420 1755 157 3 20 chr20 17656310 17656610 -49011395 + AluJo SINE Alu 1 295 -17 612 280 42 45 chr20 17656990 17657405 -49010600 - MLT1H1 LTR MaLR -85 464 5 1994 120 33 0 chr20 17659615 17659937 -49008068 - AluSx SINE Alu 0 333 3 312 296 0 0 chr20 17659980 17660051 -49007954 + (CACG)n Simple_repeat Simple_repeat 1 71 0 661 324 92 20 chr20 17660626 17660919 -49007086 - L2 LINE L2 -8 3305 2992 324 196 12 42 chr20 17661094 17661262 -49006743 + (TA)n Simple_repeat Simple_repeat 2 164 0 222 239 15 0 chr20 17661282 17661349 -49006656 + (TA)n Simple_repeat Simple_repeat 2 69 0 272 118 10 59 chr20 17661371 17661473 -49006532 + (TA)n Simple_repeat Simple_repeat 1 97 0 183 156 0 0 chr20 17661607 17661639 -49006366 + (TA)n Simple_repeat Simple_repeat 2 33 0 258 105 0 0 chr20 17662680 17662718 -49005287 + (TA)n Simple_repeat Simple_repeat 1 38 0 12828 137 54 14 chr20 17663198 17665043 -49002962 + Tigger1 DNA MER2_type 2 1950 -468 1885 139 10 17 chr20 17665043 17665344 -49002661 - AluSq SINE Alu -14 299 1 12828 137 54 14 chr20 17665344 17665676 -49002329 + Tigger1 DNA MER2_type 1950 2267 -151 35 78 0 0 chr20 17668735 17668812 -48999193 + AT_rich Low_complexity Low_complexity 1 77 0 709 273 14 42 chr20 17668895 17669184 -48998821 - L1ME4a LINE L1 -241 5880 5600 298 252 94 31 chr20 17669197 17669356 -48998649 - L1ME4a LINE L1 -4 6117 5949 264 203 0 51 chr20 17669709 17669788 -48998217 - L1ME4a LINE L1 -58 6063 5989 572 294 34 42 chr20 17669914 17670176 -48997829 + MIR SINE MIR 3 262 0 701 295 57 16 chr20 17670263 17670578 -48997427 - L1MC4a LINE L1 -1949 5859 5532 367 261 101 36 chr20 17670660 17670798 -48997207 - MIR SINE MIR -108 154 8 207 244 0 0 chr20 17671278 17671323 -48996682 + CT-rich Low_complexity Low_complexity 3 47 0 223 275 35 120 chr20 17671534 17671626 -48996379 + L2 LINE L2 3179 3256 -57 3871 190 25 55 chr20 17671626 17672610 -48995395 - LTR5 LTR ERVK -14 955 1 223 275 35 120 chr20 17672610 17672659 -48995346 + L2 LINE L2 3256 3308 -5 1257 63 19 0 chr20 17672867 17673025 -48994980 + HERV17 LTR ERV1 8466 8626 0 2394 55 62 0 chr20 17673025 17673332 -48994673 + LTR17 LTR ERV1 1 326 -454 363 96 0 0 chr20 17673332 17673384 -48994621 + (A)n Simple_repeat Simple_repeat 1 52 0 568 248 52 13 chr20 17674060 17674213 -48993792 + MIR SINE MIR 80 238 -24 228 171 0 0 chr20 17675126 17675161 -48992844 - MER5A DNA MER1_type 0 189 155 352 264 57 21 chr20 17675702 17675842 -48992163 + MER103 DNA DNA 1 145 -21 405 0 0 0 chr20 17676256 17676301 -48991704 + (CA)n Simple_repeat Simple_repeat 2 46 0 2126 116 72 20 chr20 17676868 17677214 -48990791 + THE1B LTR MaLR 1 364 0 307 180 0 0 chr20 17677824 17677874 -48990131 + 5S rRNA rRNA 2 51 -70 3132 123 14 4 chr20 17677948 17678458 -48989547 + L1MA5A LINE L1 5779 6293 -4 325 355 24 8 chr20 17679449 17679573 -48988432 + L2 LINE L2 3137 3262 -10 195 294 185 17 chr20 17679588 17679707 -48988298 - L2 LINE L2 -10 3303 3165 529 310 60 11 chr20 17679745 17679929 -48988076 - MIR SINE MIR -6 256 64 1063 135 45 141 chr20 17680589 17680772 -48987233 - MER33 DNA MER1_type -2261 324 190 1176 83 0 0 chr20 17680772 17680929 -48987076 + L1PA11 LINE L1 6018 6174 0 1063 135 45 141 chr20 17680929 17681100 -48986905 - MER33 DNA MER1_type -2395 190 4 884 221 0 31 chr20 17681574 17681769 -48986236 + MER5A DNA MER1_type 1 189 0 920 252 45 36 chr20 17681925 17682258 -48985747 + L1ME3A LINE L1 5835 6170 0 1377 211 60 52 chr20 17683607 17683971 -48984034 + MLT1A2 LTR MaLR 1 367 -7 1990 118 0 17 chr20 17684468 17684781 -48983224 - AluSg SINE Alu 0 308 1 184 283 0 33 chr20 17685316 17685376 -48982629 + MIR SINE MIR 20 77 -131 766 239 113 73 chr20 17685410 17685808 -48982197 - LTR16C LTR ERVL -2 489 76 228 302 56 24 chr20 17685983 17686109 -48981896 + L1ME LINE L1 5727 5856 -265 205 330 47 66 chr20 17687255 17687361 -48980644 - MIR3 SINE MIR -28 180 77 229 179 0 0 chr20 17687569 17687608 -48980397 + Tigger4(Zombi) DNA MER2_type 1 39 -2692 * 370 142 18 0 chr20 17687585 17687651 -48980354 + Tigger4(Zombi) DNA MER2_type 270 2731 0 357 309 83 30 chr20 17688349 17688614 -48979391 + MARNA DNA Mariner 177 455 -131 1920 166 42 28 chr20 17689175 17689531 -48978474 - MLT1A1 LTR MaLR 0 365 5 603 242 38 6 chr20 17689995 17690152 -48977853 + MER104 DNA Tc2 15 176 -4 26 30 0 0 chr20 17690531 17690564 -48977441 + AT_rich Low_complexity Low_complexity 1 33 0 505 211 15 75 chr20 17691328 17691412 -48976593 + L2 LINE L2 3187 3262 -51 1497 219 3 0 chr20 17691412 17691695 -48976310 + AluJo SINE Alu 4 287 -25 505 211 15 75 chr20 17691695 17691743 -48976262 + L2 LINE L2 3262 3311 -2 180 0 0 0 chr20 17692631 17692651 -48975354 + (A)n Simple_repeat Simple_repeat 1 20 0 433 371 84 33 chr20 17692900 17693447 -48974558 + HAL1 LINE L1 1188 1762 -745 35 41 0 0 chr20 17693695 17693744 -48974261 + AT_rich Low_complexity Low_complexity 1 49 0 249 86 17 17 chr20 17693750 17693808 -48974197 - LTR66 LTR ERVL -171 439 382 501 267 68 76 chr20 17694401 17695238 -48972767 + L1MCa LINE L1 982 2008 -4599 1181 254 96 3 chr20 17695442 17696030 -48971975 + L1ME4a LINE L1 163 833 -5563 1153 215 203 62 chr20 17696031 17696189 -48971816 + LTR40b LTR ERVL 1 135 -327 2622 102 6 3 chr20 17696189 17696552 -48971453 + THE1B LTR MaLR 1 364 0 1153 215 203 62 chr20 17696552 17696798 -48971207 + LTR40b LTR ERVL 135 462 0 1263 299 27 18 chr20 17696799 17697471 -48970534 + L1ME4a LINE L1 831 1508 -4888 2108 120 6 28 chr20 17697477 17697794 -48970211 + AluSx SINE Alu 1 310 -2 274 205 103 51 chr20 17697813 17697930 -48970075 + L1ME3 LINE L1 5825 5947 -223 264 266 0 16 chr20 17698190 17698254 -48969751 + GA-rich Low_complexity Low_complexity 3 65 0 24 0 0 0 chr20 17698424 17698448 -48969557 + AT_rich Low_complexity Low_complexity 1 24 0 307 304 87 23 chr20 17698998 17699264 -48968741 + L1ME4a LINE L1 4835 5117 -1098 2282 110 6 3 chr20 17699275 17699621 -48968384 + L1MC1 LINE L1 5800 6146 -187 459 138 23 11 chr20 17699623 17699710 -48968295 + L1MC1 LINE L1 6246 6333 0 345 304 106 33 chr20 17700001 17700689 -48967316 + L1ME4a LINE L1 5358 6098 -92 22 0 0 0 chr20 17700763 17700785 -48967220 + AT_rich Low_complexity Low_complexity 1 22 0 197 286 54 0 chr20 17702329 17702385 -48965620 - MIR SINE MIR -126 136 78 367 231 10 39 chr20 17702675 17702779 -48965226 + L1ME3 LINE L1 6056 6156 -6 189 294 87 11 chr20 17702883 17702975 -48965030 + MIR SINE MIR 149 247 -15 612 236 134 0 chr20 17703003 17703160 -48964845 - MER5A DNA MER1_type 0 189 12 882 195 124 95 chr20 17703160 17703591 -48964414 + LTR21A LTR ERV1 1 486 -19 386 272 195 31 chr20 17704097 17704358 -48963647 - MLT1I LTR MaLR -13 396 93 4088 33 21 0 chr20 17704818 17705298 -48962707 - LTR2B LTR ERV1 0 490 1 20101 125 12 6 chr20 17705298 17706334 -48961671 - Harlequin LTR ERV1 0 6896 5868 219 36 0 0 chr20 17706334 17706362 -48961643 + (TTG)n Simple_repeat Simple_repeat 2 29 0 20101 125 12 6 chr20 17706362 17708851 -48959154 - Harlequin LTR ERV1 -1028 5868 3352 6422 65 38 1 chr20 17708850 17709817 -48958188 - Harlequin LTR ERV1 -4322 2574 1572 * 6017 86 12 24 chr20 17709802 17710716 -48957289 - Harlequin LTR ERV1 -5993 903 1 * 3991 44 21 0 chr20 17710717 17711196 -48956809 - LTR2B LTR ERV1 -1 489 1 191 36 36 0 chr20 17711821 17711849 -48956156 + (TG)n Simple_repeat Simple_repeat 2 30 0 842 259 15 0 chr20 17713911 17714108 -48953897 + MIR SINE MIR 60 259 -3 582 174 8 0 chr20 17718051 17718183 -48949822 - LTR37A LTR ERV1 -11 415 283 324 0 0 0 chr20 17718183 17718219 -48949786 + (TG)n Simple_repeat Simple_repeat 2 37 0 1909 180 12 0 chr20 17718237 17718571 -48949434 + MER7A DNA MER2_type 11 346 0 1063 240 123 44 chr20 17719226 17719777 -48948228 - HsTC2 DNA Tc2 -15 1883 1289 269 275 28 46 chr20 17720135 17720244 -48947761 - L2 LINE L2 0 3313 3207 2505 68 0 3 chr20 17720272 17720599 -48947406 - AluY SINE Alu 0 326 1 2948 139 27 57 chr20 17720616 17720808 -48947197 - L1MA9 LINE L1 -365 5947 5751 249 33 0 0 chr20 17720808 17720838 -48947167 + (TG)n Simple_repeat Simple_repeat 2 31 0 2948 139 27 57 chr20 17720838 17721280 -48946725 - L1MA9 LINE L1 -561 5751 5332 976 216 0 4 chr20 17721276 17721503 -48946502 - L1 LINE L1 -2478 3668 3443 * 11600 201 37 15 chr20 17721482 17723507 -48944498 - L1MA9 LINE L1 -802 5344 3231 2436 88 0 0 chr20 17723507 17723813 -48944192 - AluY SINE Alu -5 306 1 11600 201 37 15 chr20 17723813 17724753 -48943252 - L1MA9 LINE L1 -2915 3231 2313 264 208 0 0 chr20 17725067 17725120 -48942885 + MER58 DNA MER1_type 2366 2418 -2 246 156 0 0 chr20 17726992 17727037 -48940968 + (TA)n Simple_repeat Simple_repeat 2 46 0 2024 201 19 61 chr20 17727236 17727759 -48940246 + MLT1D LTR MaLR 5 505 0 250 291 52 45 chr20 17727933 17728020 -48939985 - L2 LINE L2 -1 3271 3181 372 71 0 0 chr20 17728020 17728076 -48939929 + (CA)n Simple_repeat Simple_repeat 1 56 0 250 291 52 45 chr20 17728076 17728122 -48939883 - L2 LINE L2 -91 3181 3137 473 241 0 0 chr20 17728137 17728220 -48939785 + MER5A DNA MER1_type 6 88 -101 222 279 12 47 chr20 17728166 17728252 -48939753 - MER5A DNA MER1_type -23 166 84 * 180 0 0 0 chr20 17728298 17728318 -48939687 + (TG)n Simple_repeat Simple_repeat 1 20 0 732 222 5 74 chr20 17728501 17728627 -48939378 - MER5A DNA MER1_type 0 189 81 2312 82 0 0 chr20 17728627 17728918 -48939087 - AluSg SINE Alu -19 291 1 732 222 5 74 chr20 17728918 17728994 -48939011 - MER5A DNA MER1_type -108 81 1 2514 120 199 47 chr20 17729434 17729967 -48938038 - LTR18B LTR ERVL 0 614 1 23 0 0 0 chr20 17732551 17732574 -48935431 + AT_rich Low_complexity Low_complexity 1 23 0 530 383 99 26 chr20 17732864 17733329 -48934676 - L3 LINE CR1 -13 1564 1066 736 255 104 9 chr20 17733465 17733677 -48934328 + MIR SINE MIR 30 261 -1 2370 92 0 0 chr20 17734424 17734719 -48933286 + AluSq SINE Alu 1 295 -18 694 254 36 6 chr20 17737296 17737461 -48930544 + MER5B DNA MER1_type 3 172 -6 2311 97 0 0 chr20 17737849 17738137 -48929868 + AluSc SINE Alu 1 288 -21 445 299 90 0 chr20 17739155 17739289 -48928716 + MIR SINE MIR 40 185 -77 324 245 136 45 chr20 17740428 17740583 -48927422 - L1M4 LINE L1 -1447 4699 4531 349 218 40 57 chr20 17740757 17740881 -48927124 - L1M4 LINE L1 -763 5383 5262 338 317 78 39 chr20 17740905 17741085 -48926920 - MIR3 SINE MIR -19 189 3 924 297 87 39 chr20 17741400 17741493 -48926512 + L2 LINE L2 2256 2343 -971 1636 74 37 0 chr20 17741493 17741709 -48926296 - AluSq SINE Alu -13 300 77 924 297 87 39 chr20 17741709 17742050 -48925955 + L2 LINE L2 2343 2711 -603 291 337 1 22 chr20 17742124 17742227 -48925778 + L2 LINE L2 2881 2982 -331 390 300 17 0 chr20 17742227 17742347 -48925658 + L2 LINE L2 3190 3311 -2 210 376 62 25 chr20 17742498 17742660 -48925345 + L2 LINE L2 2832 2999 -314 259 306 35 0 chr20 17742692 17742777 -48925228 + L2 LINE L2 3185 3272 0 245 370 55 28 chr20 17742813 17742994 -48925011 + L2 LINE L2 3086 3271 -1 232 254 0 0 chr20 17744497 17744556 -48923449 - MLT1J2 LTR MaLR -115 335 277 750 263 23 0 chr20 17744593 17744768 -48923237 + MER5A DNA MER1_type 11 189 0 334 324 29 12 chr20 17744779 17744952 -48923053 - MLT1J1 LTR MaLR -232 214 39 417 284 142 83 chr20 17745102 17745525 -48922480 + L2 LINE L2 2813 3260 -12 277 279 27 18 chr20 17746393 17746504 -48921501 - MIR SINE MIR -150 112 1 459 269 126 67 chr20 17746551 17746789 -48921216 - MIR SINE MIR 0 262 11 213 94 0 0 chr20 17746863 17746895 -48921110 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 2465 72 0 3 chr20 17746993 17747300 -48920705 - AluY SINE Alu -5 306 1 525 333 16 16 chr20 17747436 17747619 -48920386 - MER5A DNA MER1_type 0 189 7 2464 74 3 0 chr20 17748145 17748444 -48919561 + AluY SINE Alu 3 302 -9 694 313 30 21 chr20 17748451 17748780 -48919225 - LTR16C LTR ERVL 0 491 160 314 325 68 26 chr20 17749067 17749258 -48918747 + L1MEd LINE L1 449 647 -5472 366 42 0 0 chr20 17749447 17749495 -48918510 + (CA)n Simple_repeat Simple_repeat 1 48 0 207 0 0 0 chr20 17749890 17749913 -48918092 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2134 97 0 24 chr20 17750813 17751142 -48916863 + AluSq SINE Alu 1 322 0 259 271 158 15 chr20 17751519 17751652 -48916353 + MIR3 SINE MIR 8 159 -49 199 262 71 151 chr20 17753077 17753329 -48914676 + L2 LINE L2 2999 3230 -42 1448 196 39 28 chr20 17753874 17754232 -48913773 - MLT1A2 LTR MaLR -8 366 5 394 318 153 19 chr20 17755705 17755966 -48912039 + HAL1b LINE L1 98 393 -955 530 311 40 37 chr20 17756260 17756588 -48911417 + L1MC/D LINE L1 5474 5802 -2006 1205 167 48 12 chr20 17757114 17757365 -48910640 + L1PA16 LINE L1 5904 6163 -3 241 172 31 16 chr20 17757458 17757522 -48910483 + GA-rich Low_complexity Low_complexity 3 67 0 526 217 3 45 chr20 17757550 17757842 -48910163 + GA-rich Low_complexity Low_complexity 1 279 0 325 289 67 32 chr20 17758550 17758705 -48909300 - MIR SINE MIR -57 151 37 206 225 0 0 chr20 17758812 17758852 -48909153 + GA-rich Low_complexity Low_complexity 1 40 0 2174 149 3 6 chr20 17759615 17759977 -48908028 - L1PB1 LINE L1 -3 6148 5788 488 103 29 40 chr20 17759979 17760154 -48907851 + (TATAA)n Simple_repeat Simple_repeat 3 175 0 806 131 0 0 chr20 17760154 17760284 -48907721 - L1PB1 LINE L1 -348 5803 5674 439 107 0 6 chr20 17760284 17760360 -48907645 + L1PB1 LINE L1 5601 5673 -486 275 267 83 8 chr20 17760860 17760980 -48907025 - MLT1I LTR MaLR -268 141 13 223 314 9 19 chr20 17761732 17761837 -48906168 + (CA)n Simple_repeat Simple_repeat 1 104 0 32 0 0 0 chr20 17762481 17762513 -48905492 + AT_rich Low_complexity Low_complexity 1 32 0 348 206 75 47 chr20 17762645 17762752 -48905253 - L1M LINE L1 -799 5363 5254 287 303 41 41 chr20 17762995 17763309 -48904696 - L1MEc LINE L1 -4811 1499 1186 306 318 5 79 chr20 17763317 17763531 -48904474 - L1MEc LINE L1 -5036 1083 886 500 247 24 27 chr20 17764217 17764519 -48903486 - L1MC/D LINE L1 -756 5390 5139 377 261 0 8 chr20 17767400 17767519 -48900486 - MER103 DNA DNA -44 122 5 1787 212 14 12 chr20 17767952 17768411 -48899594 - MER89 LTR ERV1 0 559 1 1980 179 71 3 chr20 17768946 17769327 -48898678 - MSTB LTR MaLR 0 426 20 2435 212 26 20 chr20 17770289 17770826 -48897179 - MER87 LTR ERV1 0 541 2 2038 129 0 3 chr20 17771625 17771911 -48896094 - AluSx SINE Alu -7 305 21 251 290 0 0 chr20 17771943 17772005 -48896000 - MIR SINE MIR -76 132 71 302 283 66 46 chr20 17772222 17772374 -48895631 + L1ME LINE L1 5656 5810 -311 267 247 82 62 chr20 17772432 17772578 -48895427 + MLT1G1 LTR MaLR 162 310 -285 239 246 66 0 chr20 17773142 17773203 -48894802 + L1MEd LINE L1 704 768 -5351 2317 223 66 16 chr20 17773558 17774257 -48893748 + L1ME2 LINE L1 5430 6163 -1 189 107 0 0 chr20 17774991 17775019 -48892986 + (A)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr20 17778227 17778250 -48889755 + AT_rich Low_complexity Low_complexity 1 23 0 2234 84 42 35 chr20 17778958 17779268 -48888737 + AluSx SINE Alu 1 312 0 187 261 39 92 chr20 17779523 17779653 -48888352 + MIR SINE MIR 116 238 -24 793 294 118 0 chr20 17780053 17780366 -48887639 + MLT1I LTR MaLR 60 409 0 510 362 91 6 chr20 17780413 17780731 -48887274 + L2 LINE L2 2827 3171 -142 210 37 0 0 chr20 17780814 17780841 -48887164 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2021 125 0 0 chr20 17781047 17781465 -48886540 - AluSg SINE Alu 0 418 1 359 282 95 81 chr20 17781472 17781623 -48886382 + L1M4 LINE L1 2786 2933 -3213 1630 175 32 51 chr20 17781623 17781995 -48886010 + MLT1A1 LTR MaLR 1 365 0 359 282 95 81 chr20 17781995 17782286 -48885719 + L1M4 LINE L1 2933 3234 -2912 215 222 0 0 chr20 17782513 17782567 -48885438 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 309 215 112 9 chr20 17782636 17782743 -48885262 - L1ME4a LINE L1 -182 5939 5822 373 362 154 13 chr20 17782773 17783221 -48884784 - L1ME4a LINE L1 -346 5775 5265 284 256 23 70 chr20 17783474 17783603 -48884402 + MLT1K LTR MaLR 117 239 -349 259 229 71 0 chr20 17783651 17783721 -48884284 + MLT1K LTR MaLR 496 570 -18 832 271 91 64 chr20 17783721 17784279 -48883726 + L2 LINE L2 2748 3312 -1 321 311 132 6 chr20 17784798 17785011 -48882994 - MLT1J2 LTR MaLR -167 279 15 2271 114 10 3 chr20 17785579 17785885 -48882120 + AluSx SINE Alu 1 308 -4 751 244 54 5 chr20 17786881 17787086 -48880919 - MIR SINE MIR -41 221 7 708 208 27 16 chr20 17787088 17787271 -48880734 - MER5A DNA MER1_type -4 185 1 335 315 212 5 chr20 17787483 17787686 -48880319 + MIR SINE MIR 18 262 0 467 266 18 0 chr20 17788087 17788196 -48879809 - L2 LINE L2 -1 3312 3202 239 254 313 29 chr20 17788244 17788496 -48879509 - L2 LINE L2 -291 3022 2709 258 209 0 0 chr20 17788768 17788811 -48879194 + MER5B DNA MER1_type 6 48 -130 999 239 94 8 chr20 17788826 17789178 -48878827 + L1MD3 LINE L1 7603 7984 -11 438 295 41 0 chr20 17789181 17789303 -48878702 + MER5B DNA MER1_type 50 176 -2 568 273 16 2 chr20 17790213 17790360 -48877645 + MER5B DNA MER1_type 26 161 -17 582 189 116 30 chr20 17790376 17790540 -48877465 - MER58A DNA MER1_type 0 224 47 413 240 0 21 chr20 17790571 17790667 -48877338 + MER5A DNA MER1_type 11 104 -85 998 263 178 35 chr20 17792137 17792647 -48875358 + MLT1G1 LTR MaLR 1 583 -12 187 274 0 84 chr20 17792714 17792809 -48875196 + L2 LINE L2 2224 2310 -1004 205 382 96 19 chr20 17793287 17793444 -48874561 + L2 LINE L2 2896 3064 -208 213 273 0 23 chr20 17793536 17793580 -48874425 + MER5A DNA MER1_type 17 59 -130 946 221 0 0 chr20 17793652 17793824 -48874181 + MER5A DNA MER1_type 17 188 -1 594 196 152 0 chr20 17793836 17793974 -48874031 + MER5B DNA MER1_type 16 174 -4 587 230 149 31 chr20 17793992 17794153 -48873852 + MER5A DNA MER1_type 7 186 -3 321 197 15 0 chr20 17794155 17794221 -48873784 + L2 LINE L2 3187 3253 -19 379 300 142 0 chr20 17794360 17794480 -48873525 - L2 LINE L2 -2 3270 3134 608 270 130 32 chr20 17794706 17794991 -48873014 - LTR16C LTR ERVL -12 479 167 5006 182 38 6 chr20 17795062 17796710 -48871295 - L1PA16 LINE L1 -9 6157 4387 390 42 0 0 chr20 17796710 17796758 -48871247 + (TATG)n Simple_repeat Simple_repeat 2 49 0 5006 182 38 6 chr20 17796758 17797032 -48870973 - L1PA16 LINE L1 -1779 4387 4123 937 178 16 37 chr20 17797035 17797226 -48870779 + MER5A DNA MER1_type 2 188 -1 362 278 53 38 chr20 17797420 17797553 -48870452 - L2 LINE L2 -1 3312 3178 182 236 36 18 chr20 17797594 17797649 -48870356 - MER5A DNA MER1_type -4 185 130 244 242 113 0 chr20 17797700 17797762 -48870243 - L2 LINE L2 -225 3047 2979 353 113 16 16 chr20 17797914 17797976 -48870029 + MLT1A1 LTR MaLR 1 62 -303 * 377 143 0 0 chr20 17797975 17798038 -48869967 + MLT1A1 LTR MaLR 301 363 -2 752 150 7 46 chr20 17798230 17798383 -48869622 + MER3 DNA MER1_type 60 206 -3 277 200 0 0 chr20 17798343 17798393 -48869612 - MER3 DNA MER1_type -119 90 41 * 422 334 190 16 chr20 17798393 17798767 -48869238 - L2 LINE L2 -641 2673 2235 225 357 85 16 chr20 17799017 17799146 -48868859 - L2 LINE L2 -10 3262 3125 412 238 83 48 chr20 17799578 17799746 -48868259 + L2 LINE L2 2734 2907 -407 192 333 227 13 chr20 17799834 17799984 -48868021 + L2 LINE L2 3106 3287 -26 563 294 38 34 chr20 17800060 17800295 -48867710 - MLT1L LTR MaLR -361 254 19 770 174 7 7 chr20 17800387 17800536 -48867469 - MER65B LTR ERV1 -381 150 2 5077 228 51 9 chr20 17800540 17800918 -48867087 - MER65B-int LTR ERV1 -5 4866 4505 2579 51 0 6 chr20 17800918 17801231 -48866774 + AluY SINE Alu 1 311 0 5077 228 51 9 chr20 17801231 17802173 -48865832 - MER65B-int LTR ERV1 -366 4505 3531 261 253 101 0 chr20 17802179 17802258 -48865747 - MER65A-int LTR ERV1 -847 4089 4003 927 239 130 8 chr20 17802267 17802668 -48865337 - MER65A-int LTR ERV1 -1141 3795 3346 299 108 31 46 chr20 17802712 17802777 -48865228 + FAM SINE Alu 116 179 0 988 194 52 77 chr20 17802777 17803363 -48864642 - MER65A-int LTR ERV1 -1974 4022 2471 560 188 68 42 chr20 17803445 17803637 -48864368 - MER65A-int LTR ERV1 -2869 3729 3533 406 240 47 12 chr20 17803729 17803900 -48864105 - MER65A-int LTR ERV1 -6224 1896 1720 23 0 0 0 chr20 17803907 17803930 -48864075 + AT_rich Low_complexity Low_complexity 1 23 0 2016 108 0 14 chr20 17803930 17804246 -48863759 - AluSq SINE Alu 0 321 10 3034 186 59 109 chr20 17804252 17805523 -48862482 - MER65A-int LTR ERV1 -2450 2421 704 629 247 0 11 chr20 17805703 17805877 -48862128 + L1 LINE L1 2146 2317 -3829 1348 223 24 56 chr20 17805877 17806286 -48861719 - MER65A-int LTR ERV1 -4040 831 436 15177 217 32 19 chr20 17806309 17812128 -48855877 + L1MA5A LINE L1 11 6045 -743 4617 139 40 13 chr20 17812146 17812903 -48855102 + L1MA5A LINE L1 6159 6935 -4 927 196 22 98 chr20 17812911 17813228 -48854777 - MER65A-int LTR ERV1 -4509 362 70 2517 169 25 11 chr20 17813298 17813737 -48854268 - MER65A LTR ERV1 0 445 1 6442 184 32 28 chr20 17814067 17814198 -48853807 + L1MB7 LINE L1 3840 3969 -2215 2304 57 4 0 chr20 17814198 17814478 -48853527 - AluY SINE Alu -18 293 13 6442 184 32 28 chr20 17814478 17814776 -48853229 + L1MB7 LINE L1 3969 4264 -1920 2084 105 18 0 chr20 17814776 17815053 -48852952 + AluY SINE Alu 16 297 -14 6442 184 32 28 chr20 17815053 17816957 -48851048 + L1MB7 LINE L1 4264 6184 0 180 264 19 38 chr20 17818050 17818103 -48849902 - L2 LINE L2 -11 3302 3251 43 20 0 0 chr20 17818939 17818989 -48849016 + AT_rich Low_complexity Low_complexity 1 50 0 1292 170 138 7 chr20 17819063 17819704 -48848301 - L1MC1 LINE L1 -106 6227 5504 378 260 155 55 chr20 17820562 17820962 -48847043 + L2 LINE L2 2873 3312 -1 196 278 100 22 chr20 17821493 17821583 -48846422 - L2 LINE L2 -8 3305 3209 394 275 150 0 chr20 17821755 17821915 -48846090 - MIR SINE MIR 0 262 79 2127 147 42 6 chr20 17822155 17822489 -48845516 - MER7A DNA MER2_type -1 345 2 345 346 107 0 chr20 17822504 17822663 -48845342 + MIR SINE MIR 13 188 -74 834 167 0 0 chr20 17822667 17822787 -48845218 + FLAM_A SINE Alu 1 120 -13 230 360 9 18 chr20 17822843 17822954 -48845051 + L2 LINE L2 3141 3250 -22 285 277 27 47 chr20 17823160 17823308 -48844697 - L1MC4 LINE L1 -31 8011 7867 600 211 192 26 chr20 17823366 17823601 -48844404 - L1ME2 LINE L1 -2 6162 5888 1817 164 57 16 chr20 17823859 17824225 -48843780 + Charlie1b DNA MER1_type 3 383 -140 430 200 30 0 chr20 17824658 17824758 -48843247 + Charlie1b DNA MER1_type 411 513 -10 276 273 91 20 chr20 17825727 17825826 -48842179 + L3b LINE CR1 1296 1401 -182 230 114 0 23 chr20 17826191 17826235 -48841770 + (TCTCCC)n Simple_repeat Simple_repeat 1 43 0 1879 129 3 44 chr20 17826632 17826951 -48841054 + AluSx SINE Alu 1 307 0 180 0 0 0 chr20 17827352 17827372 -48840633 + (TTTTTG)n Simple_repeat Simple_repeat 1 20 0 865 209 18 0 chr20 17827420 17827583 -48840422 - MER5B DNA MER1_type -12 166 1 583 223 97 17 chr20 17827591 17827766 -48840239 - MER5A DNA MER1_type 0 189 1 330 26 0 0 chr20 17828180 17828219 -48839786 + (TG)n Simple_repeat Simple_repeat 2 40 0 657 215 32 91 chr20 17829157 17829343 -48838662 - MER5A DNA MER1_type -13 176 2 389 316 96 15 chr20 17829368 17829504 -48838501 + MER5B DNA MER1_type 32 178 0 1072 144 31 62 chr20 17829553 17829747 -48838258 + MER5A DNA MER1_type 1 188 -1 764 264 161 34 chr20 17830473 17830890 -48837115 + MLT1H LTR MaLR 80 549 0 242 231 0 0 chr20 17830890 17830938 -48837067 + AluSc SINE Alu 247 294 -5 202 191 24 0 chr20 17830987 17831029 -48836976 + L2 LINE L2 3023 3065 -248 211 260 268 24 chr20 17831785 17831908 -48836097 - MIR SINE MIR -108 154 2 529 255 161 6 chr20 17833243 17833404 -48834601 - MER5A DNA MER1_type 0 189 4 2247 112 3 0 chr20 17833515 17833811 -48834194 + AluSg SINE Alu 1 297 -13 256 304 44 44 chr20 17833954 17834089 -48833916 - MLT1K LTR MaLR 0 588 454 2045 203 126 46 chr20 17835325 17835827 -48832178 - MLT1F LTR MaLR 0 542 1 212 311 81 0 chr20 17837152 17837226 -48830779 + L2 LINE L2 2560 2639 -675 890 201 82 5 chr20 17837231 17837425 -48830580 + MER3 DNA MER1_type 1 209 0 294 263 96 39 chr20 17837586 17837742 -48830263 - Charlie8 DNA MER1_type -2251 166 2 2936 158 41 74 chr20 17838194 17838827 -48829178 - LTR9 LTR ERV1 0 612 1 307 273 56 19 chr20 17839433 17839594 -48828411 - L1ME LINE L1 -351 5770 5604 522 267 186 65 chr20 17839765 17840244 -48827761 + MLT1H LTR MaLR 13 549 0 284 306 24 0 chr20 17841117 17841202 -48826803 + MIR SINE MIR 51 137 -71 7958 150 19 7 chr20 17841618 17842995 -48825010 - L1PA13 LINE L1 -1743 4403 3011 6757 92 11 3 chr20 17842996 17844754 -48823251 + L1PA13 LINE L1 4379 6160 -3 2078 214 33 13 chr20 17844959 17845413 -48822592 - MLT1D LTR MaLR -8 497 35 * 2639 173 15 11 chr20 17845412 17845868 -48822137 + LTR32 LTR ERVL 14 471 0 277 125 0 0 chr20 17845868 17845907 -48822098 - MLT1D LTR MaLR -466 39 1 186 323 84 36 chr20 17845909 17846076 -48821929 + L2 LINE L2 2933 3107 -165 296 325 62 45 chr20 17847010 17847253 -48820752 + L3 LINE CR1 1298 1544 -33 835 133 6 6 chr20 17848079 17848245 -48819760 + (GA)n Simple_repeat Simple_repeat 2 167 0 658 232 132 26 chr20 17848651 17848841 -48819164 + MER63A DNA MER1_type 1 210 0 185 0 40 0 chr20 17850408 17850433 -48817572 + (CAAAG)n Simple_repeat Simple_repeat 1 26 0 1225 212 102 0 chr20 17850866 17851130 -48816875 + AluJo SINE Alu 1 291 -21 314 267 12 12 chr20 17851248 17851334 -48816671 - MIR SINE MIR -128 134 49 183 189 0 54 chr20 17851478 17851515 -48816490 - L2 LINE L2 -20 3252 3218 2201 118 7 7 chr20 17851837 17852142 -48815863 + AluSx SINE Alu 1 305 -7 205 304 0 0 chr20 17852222 17852268 -48815737 + L3b LINE CR1 1295 1340 -243 340 275 214 7 chr20 17852477 17852648 -48815357 + MIR SINE MIR 3 213 -49 1193 219 101 50 chr20 17853516 17853958 -48814047 - MLT1H LTR MaLR -8 541 38 498 336 78 17 chr20 17854102 17854334 -48813671 - MIR SINE MIR -13 249 4 207 0 0 0 chr20 17854666 17854689 -48813316 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 339 263 90 53 chr20 17855209 17855342 -48812663 - MIR3 SINE MIR -56 152 15 431 187 179 45 chr20 17855905 17856039 -48811966 + L2 LINE L2 2376 2527 -787 28 0 0 0 chr20 17856186 17856214 -48811791 + AT_rich Low_complexity Low_complexity 1 28 0 1131 230 0 81 chr20 17856646 17856990 -48811015 + L1ME3 LINE L1 5738 6053 -109 1055 222 5 10 chr20 17857012 17857215 -48810790 + MER58A DNA MER1_type 23 224 0 335 239 7 4 chr20 17857215 17857300 -48810705 + L1ME3 LINE L1 6045 6131 -39 705 61 35 17 chr20 17857306 17857421 -48810584 + (GGAA)n Simple_repeat Simple_repeat 4 120 0 547 286 106 11 chr20 17857638 17857827 -48810178 + MIR SINE MIR 48 254 -8 525 253 112 35 chr20 17858929 17859099 -48808906 - MLT1E LTR MaLR -205 388 206 3315 103 0 5 chr20 17859117 17859636 -48808369 - MER41A LTR ERV1 0 554 1 28 48 0 0 chr20 17859664 17859706 -48808299 + AT_rich Low_complexity Low_complexity 1 42 0 744 255 43 0 chr20 17859706 17859894 -48808111 - MLT1E LTR MaLR -397 196 1 335 310 70 23 chr20 17860103 17860232 -48807773 - MIR3 SINE MIR -62 146 12 4167 237 52 19 chr20 17860255 17861455 -48806550 + L1MB7 LINE L1 2 1241 -5301 1227 125 0 11 chr20 17861533 17861709 -48806296 + AluSg/x SINE Alu 130 303 -7 4740 241 88 20 chr20 17861712 17863243 -48804762 + L1MB7 LINE L1 1291 2716 -3928 1848 162 0 40 chr20 17863243 17863540 -48804465 + AluSx SINE Alu 1 285 -27 4740 241 88 20 chr20 17863540 17864829 -48803176 + L1MB7 LINE L1 2716 4325 -2319 2148 190 47 22 chr20 17864820 17866561 -48801444 + L1MB7 LINE L1 4784 6668 -14 * 1542 252 82 19 chr20 17866839 17867427 -48800578 + L1ME2 LINE L1 5530 6154 -10 196 265 82 0 chr20 17867453 17867502 -48800503 + MER5B DNA MER1_type 125 177 -1 24 0 0 0 chr20 17867660 17867684 -48800321 + AT_rich Low_complexity Low_complexity 1 24 0 194 298 11 32 chr20 17868427 17868521 -48799484 + MIR SINE MIR 170 261 -1 568 237 129 25 chr20 17868602 17869051 -48798954 + MLT1F LTR MaLR 1 540 -2 360 245 90 58 chr20 17869514 17869702 -48798303 - MIR SINE MIR 0 262 69 305 125 62 0 chr20 17870158 17870206 -48797799 + MER5B DNA MER1_type 1 51 -127 264 227 107 13 chr20 17870981 17871056 -48796949 + L2 LINE L2 3227 3308 -5 402 271 20 112 chr20 17871888 17872139 -48795866 - MIR SINE MIR -14 248 21 979 265 63 57 chr20 17872719 17873195 -48794810 + MLT1H LTR MaLR 71 549 0 4209 183 34 1 chr20 17873237 17874030 -48793975 + L1MC1 LINE L1 20 838 -5588 555 86 71 10 chr20 17874033 17874232 -48793773 + (TA)n Simple_repeat Simple_repeat 1 211 0 3606 161 55 19 chr20 17874232 17875192 -48792813 + L1MC1 LINE L1 846 1944 -4482 1241 114 6 0 chr20 17875198 17875365 -48792640 - AluSp SINE Alu -26 287 120 3916 226 42 10 chr20 17875369 17875473 -48792532 + L1MC1 LINE L1 2009 2108 -4318 1656 161 21 7 chr20 17875473 17875752 -48792253 - AluJb SINE Alu -9 303 21 3916 226 42 10 chr20 17875752 17877313 -48790692 + L1MC1 LINE L1 2108 3727 -2699 726 168 0 0 chr20 17877317 17877430 -48790575 + FLAM_C SINE Alu 1 113 -30 1661 193 23 7 chr20 17877454 17877755 -48790250 + AluJo SINE Alu 1 306 -6 761 167 23 6 chr20 17877761 17877935 -48790070 + GA-rich Low_complexity Low_complexity 3 179 0 235 221 13 13 chr20 17877957 17878034 -48789971 + GA-rich Low_complexity Low_complexity 3 79 0 6001 230 25 21 chr20 17878034 17879819 -48788186 + L1MC1 LINE L1 3721 5512 -914 4987 124 32 61 chr20 17879820 17880791 -48787214 + L1MC1 LINE L1 5671 6613 0 257 337 111 68 chr20 17881177 17881225 -48786780 - L2 LINE L2 0 3313 3269 2273 74 0 7 chr20 17881225 17881508 -48786497 - AluSq SINE Alu -13 300 20 257 337 111 68 chr20 17881508 17881827 -48786178 - L2 LINE L2 -44 3269 2930 383 315 14 91 chr20 17881960 17882236 -48785769 + MER115 DNA AcHobo 56 310 -383 870 206 46 0 chr20 17882303 17882497 -48785508 + MER115 DNA AcHobo 477 679 -14 326 256 0 4 chr20 17882550 17882680 -48785325 - MER5A DNA MER1_type -1 188 9 22 0 0 0 chr20 17882973 17882995 -48785010 + AT_rich Low_complexity Low_complexity 1 22 0 259 221 234 32 chr20 17884283 17884437 -48783568 - Charlie8 DNA MER1_type -2154 263 79 3057 72 26 2 chr20 17884583 17885002 -48783003 - L1PA10 LINE L1 -1 6167 5739 738 89 45 0 chr20 17885002 17885114 -48782891 + L1P4 LINE L1 5551 5667 -501 248 260 26 26 chr20 17886384 17886461 -48781544 + MIR SINE MIR 39 115 -147 356 273 101 14 chr20 17887712 17887851 -48780154 + MIR3 SINE MIR 33 183 -25 2127 139 0 0 chr20 17888288 17888582 -48779423 - AluSx SINE Alu -18 294 1 21 0 0 0 chr20 17888590 17888611 -48779394 + AT_rich Low_complexity Low_complexity 1 21 0 1171 223 148 47 chr20 17888707 17889240 -48778765 + MLT1G LTR MaLR 2 588 -2 2008 165 15 21 chr20 17889296 17889635 -48778370 - MER1B DNA MER1_type 0 337 1 291 335 168 19 chr20 17889934 17890143 -48777862 + MIR SINE MIR 2 241 -21 2265 161 78 22 chr20 17890345 17890804 -48777201 - MER31A LTR ERV1 0 485 1 184 333 38 76 chr20 17890933 17891038 -48776967 - L2 LINE L2 -4 3309 3209 617 260 18 26 chr20 17891158 17891352 -48776653 - MIR SINE MIR -41 221 25 293 280 112 21 chr20 17891574 17891717 -48776288 + MLT1J2 LTR MaLR 273 428 -22 245 344 62 0 chr20 17892187 17892283 -48775722 - L2 LINE L2 0 3272 3171 255 219 26 53 chr20 17893946 17894060 -48773945 - MER33 DNA MER1_type 0 324 214 241 203 165 60 chr20 17894049 17894182 -48773823 - MER33 DNA MER1_type -173 151 5 * 1415 243 105 89 chr20 17894186 17894817 -48773188 + MER115 DNA AcHobo 53 693 0 294 155 17 0 chr20 17895374 17895432 -48772573 - MLT1G1 LTR MaLR 0 595 537 229 250 0 0 chr20 17895725 17895781 -48772224 - MLT1I LTR MaLR -274 135 80 * 258 241 24 12 chr20 17895751 17895834 -48772171 - MLT1F LTR MaLR -439 103 20 413 320 46 81 chr20 17895948 17896232 -48771773 + L2 LINE L2 2993 3266 -6 659 134 0 28 chr20 17896234 17896376 -48771629 + (GGGA)n Simple_repeat Simple_repeat 3 140 0 679 298 96 0 chr20 17896466 17896684 -48771321 - MIR SINE MIR -11 251 13 933 272 50 9 chr20 17897352 17897675 -48770330 + L1ME3A LINE L1 5534 5869 -301 185 326 90 0 chr20 17898099 17898188 -48769817 + L2 LINE L2 3174 3270 -2 257 250 83 0 chr20 17898238 17898322 -48769683 - LTR16C LTR ERVL -14 477 387 279 0 0 0 chr20 17899196 17899227 -48768778 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 587 107 0 0 chr20 17899231 17899315 -48768690 - AluSg/x SINE Alu -31 278 195 610 236 111 53 chr20 17901156 17901690 -48766315 + MLT1F LTR MaLR 1 532 -10 2519 136 18 43 chr20 17901786 17902228 -48765777 + Tigger2a DNA MER2_type 1 431 -3 840 234 87 91 chr20 17902817 17903356 -48764649 - MLT1H LTR MaLR 0 549 13 527 317 67 0 chr20 17904125 17904305 -48763700 + MIR SINE MIR 61 252 -10 883 242 58 77 chr20 17904658 17905082 -48762923 - MLT1G LTR MaLR -161 434 38 29 47 0 0 chr20 17905171 17905214 -48762791 + AT_rich Low_complexity Low_complexity 1 43 0 1386 193 45 84 chr20 17905228 17905632 -48762373 - MLT1B LTR MaLR -2 388 1 2339 206 19 11 chr20 17905632 17906103 -48761902 - MLT1B-int LTR MaLR 0 1735 1261 546 236 16 0 chr20 17906387 17906510 -48761495 - MLT1B-int LTR MaLR -703 668 544 * 1170 187 47 4 chr20 17906503 17906760 -48761245 - MLT1B-int LTR MaLR -1103 268 1 1166 205 31 83 chr20 17906766 17906983 -48761022 - MLT1A2 LTR MaLR -6 368 178 204 40 0 0 chr20 17906983 17907008 -48760997 + (GA)n Simple_repeat Simple_repeat 2 26 0 1166 205 31 83 chr20 17907008 17907175 -48760830 - MLT1A2 LTR MaLR -196 178 4 1768 180 33 22 chr20 17908488 17908849 -48759156 + MLT1A1 LTR MaLR 1 365 0 851 250 103 56 chr20 17909130 17909690 -48758315 + MLT1G1 LTR MaLR 1 626 0 203 280 20 0 chr20 17911022 17911072 -48756933 + L2 LINE L2 3221 3271 -1 227 336 28 19 chr20 17911097 17911204 -48756801 - L2 LINE L2 -214 3058 2951 386 278 48 32 chr20 17912399 17912525 -48755480 - L2 LINE L2 0 3272 3145 376 262 11 59 chr20 17912735 17912922 -48755083 + (CAGTG)n Simple_repeat Simple_repeat 1 178 0 265 276 0 78 chr20 17912941 17913133 -48754872 + (CAGTA)n Simple_repeat Simple_repeat 3 179 0 * 474 216 40 34 chr20 17913022 17913198 -48754807 + (CAGTG)n Simple_repeat Simple_repeat 1 177 0 190 111 0 44 chr20 17913217 17913262 -48754743 + (CAGTG)n Simple_repeat Simple_repeat 1 43 0 343 185 0 58 chr20 17913296 17913485 -48754520 + (CAGTG)n Simple_repeat Simple_repeat 1 178 0 206 244 30 38 chr20 17913503 17913634 -48754371 + (CTGTG)n Simple_repeat Simple_repeat 5 134 0 * 374 176 55 55 chr20 17913550 17913715 -48754290 + (TAGTG)n Simple_repeat Simple_repeat 4 168 0 * 460 248 17 48 chr20 17913603 17914004 -48754001 + (CAGTG)n Simple_repeat Simple_repeat 1 388 0 1084 224 19 0 chr20 17915232 17915446 -48752559 - MER58A DNA MER1_type 0 224 7 189 147 0 0 chr20 17915580 17915614 -48752391 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 248 236 78 11 chr20 17915620 17915722 -48752283 + L1MC4 LINE L1 6572 6652 -1133 255 31 0 0 chr20 17916270 17916302 -48751703 + (TG)n Simple_repeat Simple_repeat 2 33 0 858 227 132 73 chr20 17916688 17917080 -48750925 + L1MEd LINE L1 520 953 -5166 1936 172 29 20 chr20 17917080 17917423 -48750582 - MER7A DNA MER2_type -1 345 2 858 227 132 73 chr20 17917423 17917562 -48750443 + L1MEd LINE L1 953 1082 -5037 353 138 28 119 chr20 17917617 17917726 -48750279 - Charlie8 DNA MER1_type -2245 172 74 221 163 0 0 chr20 17918691 17918734 -48749271 + T-rich Low_complexity Low_complexity 1 43 0 2528 55 0 13 chr20 17918933 17919240 -48748765 + AluY SINE Alu 1 303 -8 526 198 28 0 chr20 17919765 17919871 -48748134 - MER5A DNA MER1_type -77 112 4 406 274 27 14 chr20 17919883 17920029 -48747976 - MER5B DNA MER1_type 0 178 31 1709 143 50 18 chr20 17920034 17920314 -48747691 + AluJo SINE Alu 10 298 -14 976 232 65 77 chr20 17921452 17921853 -48746152 - MSTD LTR MaLR 0 396 1 776 99 18 0 chr20 17923315 17923426 -48744579 - FLAM_C SINE Alu -18 125 13 21 36 0 0 chr20 17923923 17923951 -48744054 + AT_rich Low_complexity Low_complexity 1 28 0 1891 225 139 15 chr20 17924129 17924667 -48743338 - MLT1E2 LTR MaLR -2 624 20 21 36 0 0 chr20 17924780 17924808 -48743197 + AT_rich Low_complexity Low_complexity 1 28 0 236 302 0 35 chr20 17925259 17925345 -48742660 + (TATATG)n Simple_repeat Simple_repeat 6 88 0 29 0 0 0 chr20 17925407 17925436 -48742569 + AT_rich Low_complexity Low_complexity 1 29 0 3950 99 42 54 chr20 17925618 17925774 -48742231 + LTR9B LTR ERV1 9 165 -479 2259 64 3 80 chr20 17925774 17926101 -48741904 - AluY SINE Alu -9 302 1 3950 99 42 54 chr20 17926101 17926588 -48741417 + LTR9B LTR ERV1 165 644 0 294 268 102 64 chr20 17926983 17927140 -48740865 - MIR3 SINE MIR -44 164 2 436 176 11 0 chr20 17927205 17927296 -48740709 + L1MA9 LINE L1 6189 6280 -32 554 280 102 51 chr20 17927354 17927668 -48740337 + HAL1 LINE L1 116 445 -2062 1367 169 97 133 chr20 17927928 17928402 -48739603 + MLT1E3 LTR MaLR 189 615 -9 994 146 10 44 chr20 17928555 17928697 -48739308 - L1MA4A LINE L1 -3 6300 6155 267 31 0 0 chr20 17928697 17928729 -48739276 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 1846 144 44 0 chr20 17928729 17928999 -48739006 - AluJb SINE Alu -29 283 2 994 146 10 44 chr20 17928999 17929060 -48738945 - L1MA4A LINE L1 -146 6157 6103 251 286 60 12 chr20 17929952 17930036 -48737969 - MIR3 SINE MIR -11 197 110 356 314 39 13 chr20 17930133 17930289 -48737716 + MIR SINE MIR 73 232 -30 2069 105 6 54 chr20 17930992 17931305 -48736700 - AluSx SINE Alu -14 298 1 414 0 0 0 chr20 17931444 17931490 -48736515 + (CA)n Simple_repeat Simple_repeat 1 46 0 1318 268 67 29 chr20 17931619 17932070 -48735935 - LTR16C LTR ERVL -18 473 6 2326 105 3 0 chr20 17932884 17933189 -48734816 + AluSx SINE Alu 1 306 -6 723 304 174 33 chr20 17934173 17934689 -48733316 - MLT1G1 LTR MaLR -2 593 5 1064 302 110 6 chr20 17935312 17935977 -48732028 + L2 LINE L2 2571 3311 -2 681 296 31 14 chr20 17936077 17936456 -48731549 + LTR16A LTR ERVL 18 444 -6 1211 182 18 36 chr20 17937114 17937389 -48730616 + L1MA9 LINE L1 6021 6290 -22 1884 156 3 19 chr20 17937435 17937750 -48730255 + AluJb SINE Alu 1 310 -2 318 254 85 25 chr20 17937752 17937870 -48730135 + L1ME LINE L1 5698 5822 -299 1582 152 22 7 chr20 17937895 17938164 -48729841 + AluSx SINE Alu 37 309 -3 1920 142 0 30 chr20 17939080 17939382 -48728623 - AluSx SINE Alu -19 293 1 315 209 27 0 chr20 17940349 17940459 -48727546 + GA-rich Low_complexity Low_complexity 2 114 0 346 281 36 71 chr20 17940468 17940577 -48727428 + L1ME4a LINE L1 5734 5845 -276 2369 96 0 0 chr20 17940577 17940869 -48727136 + AluSg SINE Alu 1 292 -18 346 281 36 71 chr20 17940869 17941012 -48726993 + L1ME4a LINE L1 5845 5977 -144 226 226 19 0 chr20 17941175 17941228 -48726777 - MIR SINE MIR -104 158 105 297 75 0 0 chr20 17941465 17941505 -48726500 + (T)n Simple_repeat Simple_repeat 1 40 0 1135 194 26 9 chr20 17942565 17942792 -48725213 + Charlie1 DNA MER1_type 9 239 -2522 421 220 30 0 chr20 17942778 17942878 -48725127 + Charlie1 DNA MER1_type 2622 2724 -37 * 215 314 31 52 chr20 17943706 17943900 -48724105 - L2 LINE L2 -743 2571 2382 2921 140 15 33 chr20 17945024 17945414 -48722591 + MER41B LTR ERV1 108 346 -140 2354 104 0 0 chr20 17945414 17945712 -48722293 - AluSg SINE Alu -12 298 1 2921 140 15 33 chr20 17945712 17945839 -48722166 + MER41B LTR ERV1 346 474 -12 490 253 102 15 chr20 17945959 17946241 -48721764 - MLT1I LTR MaLR -6 403 67 229 224 38 13 chr20 17946447 17946528 -48721477 - MIR SINE MIR -104 104 64 422 293 159 31 chr20 17947363 17947653 -48720352 - L3 LINE CR1 -29 1548 1222 2262 84 0 3 chr20 17948153 17948477 -48719528 - AluY SINE Alu 0 323 1 2284 112 0 3 chr20 17949034 17949337 -48718668 + AluSc SINE Alu 1 302 -7 540 242 51 67 chr20 17951264 17951442 -48716563 - MER5B DNA MER1_type 0 178 4 7110 59 6 42 chr20 17951480 17952470 -48715535 - SVA Other Other 0 1386 433 2846 88 24 90 chr20 17952537 17953352 -48714653 - SVA Other Other -518 868 393 2569 41 0 0 chr20 17954075 17954367 -48713638 + AluY SINE Alu 1 292 -19 238 333 11 73 chr20 17955763 17955940 -48712065 - MIR SINE MIR -49 213 48 181 300 25 0 chr20 17956193 17956273 -48711732 + MIR SINE MIR 66 147 -61 3275 71 18 29 chr20 17956342 17956791 -48711214 - MLT2A1 LTR ERVL 0 444 1 270 0 0 0 chr20 17957051 17957081 -48710924 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 214 224 0 35 chr20 17957158 17957216 -48710789 + GA-rich Low_complexity Low_complexity 4 59 0 201 336 84 0 chr20 17957220 17957339 -48710666 - MIR SINE MIR -17 245 117 2482 97 0 0 chr20 17958705 17959015 -48708990 + AluSg SINE Alu 1 310 0 399 301 24 60 chr20 17959247 17959333 -48708672 - MIR SINE MIR -6 256 168 1739 170 11 11 chr20 17959333 17959635 -48708370 + AluSx SINE Alu 1 302 0 399 301 24 60 chr20 17959635 17959808 -48708197 - MIR SINE MIR -94 168 12 21 0 0 0 chr20 17959808 17959829 -48708176 + AT_rich Low_complexity Low_complexity 1 21 0 372 269 28 64 chr20 17960380 17960521 -48707484 + MIR SINE MIR 14 149 -113 674 298 90 51 chr20 17960521 17960917 -48707088 - LTR16A1 LTR ERVL 0 482 73 2301 127 94 8 chr20 17962598 17962992 -48705013 - MSTA LTR MaLR 0 428 1 1659 212 84 47 chr20 17963008 17963539 -48704466 - MLT1F1 LTR MaLR 0 567 17 264 272 202 29 chr20 17964218 17964391 -48703614 + MLT1H LTR MaLR 347 549 0 309 230 19 118 chr20 17964395 17964556 -48703449 + MLT1H-int LTR MaLR 5 149 -1222 268 300 173 47 chr20 17965450 17965727 -48702278 + MLT1H-int LTR MaLR 1028 1339 -32 517 295 35 37 chr20 17965757 17966028 -48701977 + MLT1H LTR MaLR 1 316 -233 372 251 144 41 chr20 17966198 17966393 -48701612 + MLT1H LTR MaLR 333 547 -8 213 248 152 88 chr20 17967195 17967320 -48700685 + L2 LINE L2 3136 3268 -4 * 1778 276 116 38 chr20 17967314 17968304 -48699701 - L2 LINE L2 0 3313 2235 512 321 0 0 chr20 17968837 17968968 -48699037 - MER94 DNA DNA -1 133 3 2263 104 3 0 chr20 17969419 17969727 -48698278 + AluSx SINE Alu 1 309 -3 418 298 86 7 chr20 17969997 17970148 -48697857 - MIR SINE MIR -53 209 47 579 149 41 8 chr20 17970303 17970424 -48697581 - MER96B DNA MER1_type? -8 409 285 253 95 0 0 chr20 17970424 17970466 -48697539 - L1MA9 LINE L1 -282 6030 5989 1539 148 14 11 chr20 17970467 17970751 -48697254 + L1MA9 LINE L1 6026 6310 -2 256 182 182 0 chr20 17970765 17970820 -48697185 + MER58A DNA MER1_type 7 71 -36 555 148 0 0 chr20 17971816 17971897 -48696108 - AluJ/FLAM SINE Alu -230 82 2 825 201 114 59 chr20 17971920 17972209 -48695796 - MLT1K LTR MaLR -272 316 12 1418 264 31 17 chr20 17972293 17972710 -48695295 - LTR16A LTR ERVL -13 437 15 325 239 43 43 chr20 17973892 17973984 -48694021 - L1MC4 LINE L1 -1339 6703 6612 188 146 49 0 chr20 17973988 17974029 -48693976 + (TATG)n Simple_repeat Simple_repeat 2 44 0 1961 128 0 0 chr20 17974030 17974337 -48693668 - AluSx SINE Alu 0 307 1 1130 223 45 9 chr20 17974436 17974919 -48693086 + MER34 LTR ERV1 11 542 0 1106 283 84 11 chr20 17974922 17975460 -48692545 - L1MC4 LINE L1 -1973 5835 5259 207 0 0 0 chr20 17975553 17975576 -48692429 + (A)n Simple_repeat Simple_repeat 1 23 0 228 227 34 23 chr20 17975706 17975794 -48692211 - MLT1J1 LTR MaLR 0 446 358 374 229 48 12 chr20 17976274 17976357 -48691648 + L2 LINE L2 3223 3308 -5 25 0 0 0 chr20 17977030 17977055 -48690950 + AT_rich Low_complexity Low_complexity 1 25 0 759 277 43 18 chr20 17977463 17977792 -48690213 - MER46C DNA MER2_type 0 338 2 233 269 0 0 chr20 17977817 17977884 -48690121 + CT-rich Low_complexity Low_complexity 1 67 0 513 216 178 38 chr20 17978877 17979090 -48688915 - MLT1H LTR MaLR -302 247 5 231 320 99 37 chr20 17979104 17979376 -48688629 - L1ME LINE L1 -508 5613 5325 2512 152 30 15 chr20 17979685 17980198 -48687807 + L1MA4 LINE L1 5617 6171 0 486 213 58 146 chr20 17980664 17980708 -48687297 + MLT2C1 LTR ERVL 28 74 -323 2536 166 46 65 chr20 17980708 17981273 -48686732 - MLT2B3 LTR ERVL 0 554 1 486 213 58 146 chr20 17981273 17981408 -48686597 + MLT2C1 LTR ERVL 74 219 -178 441 0 0 0 chr20 17981408 17981457 -48686548 + (TG)n Simple_repeat Simple_repeat 1 49 0 198 0 0 0 chr20 17981456 17981478 -48686527 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 486 213 58 146 chr20 17981457 17981659 -48686346 + MLT2C1 LTR ERVL 219 357 -40 240 219 16 94 chr20 17983997 17984189 -48683816 + C-rich Low_complexity Low_complexity 3 179 0 237 282 0 42 chr20 17985515 17985586 -48682419 + G-rich Low_complexity Low_complexity 1 68 0 576 208 157 59 chr20 17985880 17986116 -48681889 - L1ME1 LINE L1 -6 6160 5902 440 248 26 0 chr20 17986138 17986255 -48681750 - MER69 DNA AcHobo -215 2311 2192 303 224 105 13 chr20 17986524 17986600 -48681405 - MER69 DNA AcHobo -2443 83 1 1779 187 171 78 chr20 17988625 17989348 -48678657 + LTR50 LTR ERVL 2 792 -3 221 204 0 23 chr20 17989654 17989698 -48678307 + MIR3 SINE MIR 151 193 -15 3305 122 27 0 chr20 17990788 17991272 -48676733 - LOR1a LTR ERV1 0 497 1 271 314 145 54 chr20 17992126 17992534 -48675471 + L2 LINE L2 2869 3313 0 234 167 37 0 chr20 17994602 17994656 -48673349 + A-rich Low_complexity Low_complexity 5 60 0 367 222 33 11 chr20 17996206 17996296 -48671709 - MIR3 SINE MIR -24 184 93 1209 143 125 5 chr20 17998395 17998611 -48669394 + AluJb SINE Alu 39 280 -32 351 0 0 0 chr20 17998611 17998650 -48669355 + (CAAT)n Simple_repeat Simple_repeat 4 42 0 501 219 225 28 chr20 17999611 17999789 -48668216 + MER20 DNA MER1_type 1 213 -6 2217 97 0 7 chr20 18000005 18000305 -48667700 - AluSx SINE Alu -14 298 1 296 190 160 20 chr20 18000309 18000409 -48667596 - L1MA10 LINE L1 -41 6293 6180 1267 272 25 11 chr20 18001812 18002180 -48665825 - L1ME3A LINE L1 -3 6167 5795 197 65 32 0 chr20 18002398 18002429 -48665576 + (TA)n Simple_repeat Simple_repeat 1 32 0 269 298 38 30 chr20 18005486 18005617 -48662388 - MIR SINE MIR -65 197 66 243 0 0 0 chr20 18005791 18005818 -48662187 + (TG)n Simple_repeat Simple_repeat 1 27 0 23 68 0 0 chr20 18006076 18006120 -48661885 + AT_rich Low_complexity Low_complexity 1 44 0 222 330 50 0 chr20 18006634 18006734 -48661271 - L2 LINE L2 0 3272 3168 278 282 74 139 chr20 18006891 18006970 -48661035 - L2 LINE L2 0 3272 3189 2215 113 0 3 chr20 18006970 18007281 -48660724 - AluSx SINE Alu -1 311 2 278 282 74 139 chr20 18007281 18007634 -48660371 - L2 LINE L2 -83 3189 2868 558 196 18 0 chr20 18008048 18008160 -48659845 - MER58 DNA MER1_type 0 2420 2307 1509 260 31 18 chr20 18008586 18008967 -48659038 - MLT1E2 LTR MaLR 0 626 241 1715 244 39 25 chr20 18008967 18009455 -48658550 + MER65B LTR ERV1 1 495 -36 309 220 144 17 chr20 18009478 18009579 -48658426 - MLT1E2 LTR MaLR -366 258 122 879 171 42 74 chr20 18009926 18010142 -48657863 + MER3 DNA MER1_type 1 209 0 23 0 0 0 chr20 18010219 18010242 -48657763 + AT_rich Low_complexity Low_complexity 1 23 0 2003 143 13 10 chr20 18010484 18010792 -48657213 + AluJb SINE Alu 1 309 -3 357 211 77 10 chr20 18010837 18010941 -48657064 - L1MC4a LINE L1 -1881 5927 5817 431 288 16 16 chr20 18011000 18011125 -48656880 + L2 LINE L2 3184 3308 -5 675 225 63 60 chr20 18011143 18011348 -48656657 - L1MC4a LINE L1 -523 5651 5512 280 191 24 113 chr20 18011739 18011897 -48656108 + MLT1E LTR MaLR 20 202 -347 530 243 21 21 chr20 18011941 18012085 -48655920 + MLT1H1 LTR MaLR 412 555 0 372 313 107 0 chr20 18013172 18013303 -48654702 + MIR SINE MIR 79 223 -39 245 146 104 0 chr20 18013838 18013886 -48654119 + Tigger5 DNA MER2_type 2271 2323 0 2237 112 37 3 chr20 18013909 18014257 -48653748 - MER47A DNA MER2_type -1 365 6 2205 63 42 0 chr20 18014521 18014808 -48653197 + AluY SINE Alu 1 299 -12 1735 237 109 45 chr20 18017948 18018783 -48649222 + HAL1 LINE L1 1139 2026 -481 307 191 107 65 chr20 18018894 18019062 -48648943 + HAL1 LINE L1 2257 2431 -76 366 329 53 20 chr20 18019306 18019607 -48648398 - LTR16C LTR ERVL -70 421 111 262 270 29 6 chr20 18020318 18020492 -48647513 + (TA)n Simple_repeat Simple_repeat 1 178 0 23 33 0 0 chr20 18020513 18020543 -48647462 + AT_rich Low_complexity Low_complexity 1 30 0 1730 209 29 55 chr20 18021701 18022227 -48645778 + MLT2B1 LTR ERVL 2 513 -7 2388 82 0 13 chr20 18022360 18022666 -48645339 + AluY SINE Alu 1 302 -9 347 339 136 15 chr20 18022723 18023053 -48644952 + L2 LINE L2 2492 2861 -453 371 263 8 68 chr20 18023061 18023194 -48644811 + MER5A DNA MER1_type 63 187 -2 262 280 21 105 chr20 18023066 18023209 -48644796 - MER5A DNA MER1_type -56 133 3 * 1226 108 0 0 chr20 18023338 18023523 -48644482 - L1P LINE L1 -2668 3478 3294 1143 238 102 50 chr20 18023670 18024166 -48643839 + L1MC5 LINE L1 7274 7808 -153 228 67 0 0 chr20 18024166 18024196 -48643809 + (TG)n Simple_repeat Simple_repeat 1 30 0 1143 238 102 50 chr20 18024196 18024296 -48643709 + L1MC5 LINE L1 7808 7901 -60 233 255 0 0 chr20 18025421 18025472 -48642533 + T-rich Low_complexity Low_complexity 1 51 0 5307 188 77 22 chr20 18025620 18026607 -48641398 - L1MC1 LINE L1 -5 6328 5397 2286 96 20 0 chr20 18026607 18026899 -48641106 - AluSx SINE Alu -14 298 1 5307 188 77 22 chr20 18026899 18027973 -48640032 - L1MC1 LINE L1 -936 5397 4126 687 296 75 0 chr20 18028042 18028282 -48639723 - MIR SINE MIR 0 262 5 484 267 60 7 chr20 18028326 18028476 -48639529 - MIR SINE MIR -56 206 49 339 284 101 50 chr20 18028568 18028846 -48639159 - L2 LINE L2 -7 3306 3015 1816 206 44 76 chr20 18030106 18030357 -48637648 + MER90 LTR ERV1 69 326 -288 3166 119 65 0 chr20 18030357 18030896 -48637109 - L1MA4 LINE L1 -6 6294 5721 1816 206 44 76 chr20 18030896 18031208 -48636797 + MER90 LTR ERV1 326 614 0 289 265 0 0 chr20 18031679 18031747 -48636258 + (CAT)n Simple_repeat Simple_repeat 1 68 0 539 268 168 10 chr20 18031754 18031963 -48636042 - MIR SINE MIR -6 256 15 654 147 129 17 chr20 18032529 18032754 -48635251 + MER5C DNA MER1_type 1 321 -3 230 214 48 12 chr20 18032844 18032928 -48635077 + (TA)n Simple_repeat Simple_repeat 1 87 0 358 223 128 0 chr20 18033212 18033306 -48634699 + L2 LINE L2 3207 3312 -1 391 320 94 26 chr20 18033432 18033666 -48634339 + MIR SINE MIR 5 254 -8 340 184 0 26 chr20 18033681 18033757 -48634248 + MER116 DNA Mariner 7 80 0 217 337 0 56 chr20 18034835 18034924 -48633081 + L2 LINE L2 3186 3269 -3 2134 135 3 0 chr20 18036156 18036467 -48631538 + AluSx SINE Alu 1 312 0 254 331 123 8 chr20 18037458 18037588 -48630417 + MIR3 SINE MIR 11 155 -53 2851 245 25 14 chr20 18038379 18039232 -48628773 - L1ME3A LINE L1 -12 6158 5297 238 331 107 24 chr20 18039472 18039641 -48628364 + MIR SINE MIR 9 191 -71 244 314 76 0 chr20 18040287 18040392 -48627613 - MIR SINE MIR -55 153 41 328 188 0 0 chr20 18041051 18041115 -48626890 - MER116 DNA Mariner -2 78 15 3503 163 102 56 chr20 18043361 18044338 -48623667 + L1MC3 LINE L1 6745 7766 -19 1928 223 111 59 chr20 18044366 18045303 -48622702 + L1MCb LINE L1 10 995 -5050 662 239 91 68 chr20 18045533 18046236 -48621769 + HAL1b LINE L1 482 1341 -7 487 321 18 18 chr20 18046322 18046490 -48621515 + MIR3 SINE MIR 33 200 -8 229 182 0 30 chr20 18047117 18047183 -48620822 + L1P LINE L1 4644 4707 -1439 32 0 0 0 chr20 18047388 18047420 -48620585 + AT_rich Low_complexity Low_complexity 1 32 0 375 331 90 6 chr20 18049253 18049431 -48618574 + MIR3 SINE MIR 6 198 -10 8091 160 6 23 chr20 18049649 18051922 -48616083 + L1PB1 LINE L1 3541 5791 -360 267 257 0 0 chr20 18051928 18052002 -48616003 + (TA)n Simple_repeat Simple_repeat 2 75 0 2512 70 35 35 chr20 18052002 18052018 -48615987 + L1PB1 LINE L1 5781 5796 -355 306 0 0 0 chr20 18052018 18052052 -48615953 + (CA)n Simple_repeat Simple_repeat 2 35 0 2512 70 35 35 chr20 18052052 18052406 -48615599 + L1PB1 LINE L1 5795 6151 0 346 308 15 39 chr20 18052473 18052603 -48615402 + MER5A DNA MER1_type 40 166 -23 1794 160 99 0 chr20 18053584 18053916 -48614089 - MLT1A1 LTR MaLR 0 365 1 248 161 21 97 chr20 18055475 18055568 -48612437 + L1ME LINE L1 5675 5760 -402 347 342 114 18 chr20 18057089 18057317 -48610688 + MIR SINE MIR 5 254 -8 247 284 69 10 chr20 18057781 18057883 -48610122 + L2 LINE L2 2260 2367 -947 773 297 150 11 chr20 18057888 18058409 -48609596 + L2 LINE L2 2650 3238 -75 203 229 92 64 chr20 18058742 18058851 -48609154 + L2 LINE L2 2996 3107 -206 183 350 77 26 chr20 18058928 18059045 -48608960 + L2 LINE L2 3160 3282 -31 2005 161 121 3 chr20 18059497 18059877 -48608128 + MSTB LTR MaLR 2 426 0 27 49 0 0 chr20 18061015 18061056 -48606949 + AT_rich Low_complexity Low_complexity 1 41 0 458 381 63 15 chr20 18061492 18061967 -48606038 + L2 LINE L2 2223 2720 -594 315 269 43 14 chr20 18062460 18062601 -48605404 - MER113 DNA MER1_type? -376 145 1 1195 269 48 30 chr20 18062987 18063492 -48604513 + L2 LINE L2 230 743 -2571 881 279 90 14 chr20 18063500 18063865 -48604140 + L2 LINE L2 1003 1395 -1919 350 304 121 13 chr20 18063879 18064103 -48603902 - L2 LINE L2 -1483 1831 1584 2646 264 96 28 chr20 18064110 18065461 -48602544 + L2 LINE L2 1861 3287 -26 924 193 56 5 chr20 18066099 18066296 -48601709 - MER6B DNA MER2_type -3 207 1 237 271 59 41 chr20 18066587 18066757 -48601248 - MER5A DNA MER1_type -16 173 1 218 308 0 0 chr20 18067293 18067345 -48600660 - L2 LINE L2 -13 3259 3208 280 225 52 84 chr20 18068774 18068965 -48599040 + Charlie7 DNA MER1_type 2419 2603 -9 339 365 0 0 chr20 18071935 18072031 -48595974 + MIR SINE MIR 47 142 -120 247 123 0 9 chr20 18073303 18073347 -48594658 + MIR SINE MIR 70 105 -103 613 264 83 21 chr20 18074370 18074612 -48593393 - Charlie8 DNA MER1_type -2157 260 4 203 238 0 0 chr20 18075476 18075518 -48592487 + GA-rich Low_complexity Low_complexity 1 42 0 1375 223 36 31 chr20 18076820 18077243 -48590762 + L1ME2 LINE L1 5750 6333 -1 608 243 96 0 chr20 18078432 18078609 -48589396 - MIR SINE MIR -2 260 67 431 183 33 33 chr20 18079035 18079155 -48588850 + MER113 DNA MER1_type? 5 124 -397 315 0 0 0 chr20 18079427 18079462 -48588543 + (CA)n Simple_repeat Simple_repeat 2 36 0 2256 92 0 7 chr20 18079613 18079905 -48588100 + AluSg SINE Alu 1 290 -20 204 327 103 51 chr20 18080276 18080432 -48587573 - MIR3 SINE MIR -16 192 29 583 198 18 0 chr20 18080923 18081034 -48586971 + MER81 DNA DNA 2 114 0 556 277 95 16 chr20 18082173 18082415 -48585590 - MIR SINE MIR 0 262 2 2127 118 0 0 chr20 18082857 18083153 -48584852 + AluY SINE Alu 1 296 -15 199 296 0 0 chr20 18083853 18083907 -48584098 - L2 LINE L2 -20 3252 3199 2136 174 72 8 chr20 18084107 18084509 -48583496 + MSTA LTR MaLR 1 428 0 180 0 0 0 chr20 18084604 18084624 -48583381 + (A)n Simple_repeat Simple_repeat 1 20 0 255 296 81 78 chr20 18087925 18088283 -48579722 + L3 LINE CR1 1101 1459 -118 362 222 109 80 chr20 18088497 18088808 -48579197 + MLT1I LTR MaLR 58 377 -32 30 45 0 0 chr20 18090159 18090203 -48577802 + AT_rich Low_complexity Low_complexity 1 44 0 22 0 0 0 chr20 18094410 18094432 -48573573 + AT_rich Low_complexity Low_complexity 1 22 0 213 125 0 0 chr20 18094773 18094805 -48573200 - L2 LINE L2 -22 3250 3219 2202 127 3 13 chr20 18096254 18096568 -48571437 + AluSx SINE Alu 1 311 -1 2147 118 0 0 chr20 18097659 18097947 -48570058 - AluSq SINE Alu -25 288 1 645 238 32 83 chr20 18098713 18098965 -48569040 - MER8 DNA MER2_type 0 239 1 303 274 66 0 chr20 18100170 18100296 -48567709 + MIR3 SINE MIR 67 201 -7 324 287 105 39 chr20 18100900 18101081 -48566924 + MIR SINE MIR 41 233 -29 1661 169 7 4 chr20 18102227 18102362 -48565643 + AluJo SINE Alu 1 134 -178 225 0 0 0 chr20 18102362 18102387 -48565618 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 1661 169 7 4 chr20 18102387 18102529 -48565476 + AluJo SINE Alu 134 279 -33 238 246 43 0 chr20 18102530 18102599 -48565406 - MIR3 SINE MIR -48 160 89 280 247 33 27 chr20 18103172 18103425 -48564580 + GA-rich Low_complexity Low_complexity 1 254 0 22 0 0 0 chr20 18105276 18105298 -48562707 + AT_rich Low_complexity Low_complexity 1 22 0 222 37 0 0 chr20 18107094 18107121 -48560884 + (GA)n Simple_repeat Simple_repeat 1 27 0 763 193 14 0 chr20 18107939 18108084 -48559921 - AluJb SINE Alu -8 304 158 472 327 31 18 chr20 18108106 18108332 -48559673 - MIR SINE MIR -17 245 17 195 266 205 0 chr20 18108927 18109049 -48558956 - MIR SINE MIR -37 171 12 221 338 12 0 chr20 18109159 18109239 -48558766 - L2 LINE L2 -39 3233 3153 243 348 22 0 chr20 18109742 18109831 -48558174 + L2 LINE L2 3143 3233 -39 2369 94 0 0 chr20 18109864 18110161 -48557844 + AluSq SINE Alu 1 297 -16 197 226 21 86 chr20 18110260 18110353 -48557652 - L2 LINE L2 -787 2527 2441 278 287 118 15 chr20 18110438 18110574 -48557431 + MIR SINE MIR 80 229 -33 284 270 189 0 chr20 18110726 18110837 -48557168 - MIR SINE MIR -6 256 125 373 358 76 40 chr20 18110922 18111503 -48556502 - L2 LINE L2 -955 2359 1758 237 325 118 18 chr20 18111673 18111842 -48556163 + MIR SINE MIR 7 192 -70 915 229 41 0 chr20 18114144 18114314 -48553691 + MER45A DNA AcHobo 2 178 0 23 0 0 0 chr20 18115223 18115246 -48552759 + AT_rich Low_complexity Low_complexity 1 23 0 223 291 94 16 chr20 18115453 18115580 -48552425 - MIR3 SINE MIR -59 149 13 226 275 257 37 chr20 18116339 18116713 -48551292 - L2 LINE L2 -40 3273 2818 293 222 86 34 chr20 18117969 18118086 -48549919 + L1ME4a LINE L1 5830 5952 -169 419 318 38 101 chr20 18118570 18118888 -48549117 - L2 LINE L2 -64 3208 2911 1092 104 0 0 chr20 18120126 18120332 -48547673 + (GGGGA)n Simple_repeat Simple_repeat 1 206 0 394 267 95 61 chr20 18120812 18121074 -48546931 + L1ME4a LINE L1 5513 5783 -338 1176 138 19 38 chr20 18121107 18121317 -48546688 + MER1B DNA MER1_type 134 339 0 312 278 73 104 chr20 18121320 18121647 -48546358 + L1ME4a LINE L1 5777 6093 -28 410 339 119 45 chr20 18122872 18123276 -48544729 - L2 LINE L2 -10 3262 2829 197 323 148 32 chr20 18124305 18124460 -48543545 + L2 LINE L2 3098 3270 -2 290 275 76 72 chr20 18124642 18124893 -48543112 + L2 LINE L2 2346 2597 -717 3566 171 70 12 chr20 18125230 18125921 -48542084 + L1MB3 LINE L1 5413 6143 -40 800 299 148 33 chr20 18126626 18127401 -48540604 + L2 LINE L2 2373 3309 -4 199 352 99 14 chr20 18127487 18127700 -48540305 - L2 LINE L2 -214 3058 2828 184 333 97 0 chr20 18128622 18128694 -48539311 + MIR3 SINE MIR 113 191 -17 333 231 231 0 chr20 18128949 18129057 -48538948 + MIR SINE MIR 124 256 -6 279 197 53 77 chr20 18129143 18129286 -48538719 - MIR SINE MIR -5 203 72 316 246 169 35 chr20 18132104 18132246 -48535759 + L3 LINE CR1 1348 1508 -69 622 287 77 45 chr20 18132699 18133009 -48534996 + MER102b DNA MER1_type 1 320 -21 291 377 0 0 chr20 18133022 18133128 -48534877 + L2 LINE L2 2253 2358 -956 529 271 19 26 chr20 18133864 18134019 -48533986 - L2 LINE L2 -5 3308 3155 782 371 45 19 chr20 18134223 18134865 -48533140 - L2 LINE L2 -383 2931 2273 332 300 0 0 chr20 18134902 18134992 -48533013 + L1MC4 LINE L1 6614 6703 -1339 238 311 0 0 chr20 18135002 18135092 -48532913 + L1MC4 LINE L1 6614 6703 -1339 209 143 0 41 chr20 18135097 18135146 -48532859 + (CATATA)n Simple_repeat Simple_repeat 5 51 0 229 275 0 44 chr20 18135146 18135237 -48532768 + L1MC4 LINE L1 6614 6700 -1342 342 67 0 0 chr20 18135239 18135249 -48532756 + (TG)n Simple_repeat Simple_repeat 1 55 0 342 67 0 0 chr20 18135249 18135294 -48532711 + (TG)n Simple_repeat Simple_repeat 2 46 0 2283 119 9 6 chr20 18135337 18135682 -48532323 - Tigger4(Zombi) DNA MER2_type 0 2731 2386 7526 140 26 11 chr20 18135682 18136879 -48531126 - Tigger4(Zombi) DNA MER2_type -1513 1218 4 387 0 0 0 chr20 18136879 18136922 -48531083 + (TG)n Simple_repeat Simple_repeat 1 43 0 406 339 140 23 chr20 18136984 18137370 -48530635 - L2 LINE L2 -1154 2160 1730 2633 108 30 14 chr20 18137377 18137746 -48530259 - THE1C LTR MaLR 0 375 1 339 260 87 29 chr20 18137923 18138027 -48529978 + MIR3 SINE MIR 84 193 -15 26 50 0 0 chr20 18138921 18138961 -48529044 + AT_rich Low_complexity Low_complexity 1 40 0 490 167 13 0 chr20 18139753 18139831 -48528174 + Tigger5 DNA MER2_type 1 79 -2244 * 1503 135 74 0 chr20 18139820 18140050 -48527955 + Tigger5 DNA MER2_type 2077 2323 0 2926 127 28 1 chr20 18140895 18141401 -48526604 - L1P LINE L1 -743 5403 4910 2321 58 44 0 chr20 18141401 18141688 -48526317 + L1PA10 LINE L1 5862 6168 0 1274 226 82 59 chr20 18142288 18143096 -48524909 + L1MDb LINE L1 786 1619 -4787 4178 161 29 6 chr20 18143249 18143947 -48524058 + MER72 LTR ERV1 9 722 0 718 193 113 0 chr20 18143948 18144098 -48523907 - MER5A DNA MER1_type -21 168 2 21 0 0 0 chr20 18144696 18144717 -48523288 + AT_rich Low_complexity Low_complexity 1 21 0 216 0 0 0 chr20 18145647 18145671 -48522334 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 329 299 133 28 chr20 18147655 18148009 -48519996 + L1 LINE L1 4443 4833 -1313 223 146 49 0 chr20 18149205 18149246 -48518759 + (TGGA)n Simple_repeat Simple_repeat 3 45 0 3144 205 96 55 chr20 18149772 18150749 -48517256 + L1MC4 LINE L1 6489 7505 -537 1982 123 148 13 chr20 18150749 18151122 -48516883 - MSTA LTR MaLR -5 423 1 316 108 44 58 chr20 18151123 18151204 -48516801 + L1MD3 LINE L1 7388 7673 -322 270 31 0 0 chr20 18151211 18151243 -48516762 - MSTA LTR MaLR -396 32 1 818 289 135 13 chr20 18151267 18151655 -48516350 + L1MC4 LINE L1 7443 7896 0 24 32 0 0 chr20 18151708 18151739 -48516266 + AT_rich Low_complexity Low_complexity 1 31 0 329 50 0 0 chr20 18153124 18153164 -48514841 + MADE1 DNA Mariner 1 40 -40 652 272 111 29 chr20 18155283 18155625 -48512380 + L2 LINE L2 1491 1860 -1454 1454 248 95 114 chr20 18155632 18155780 -48512225 + L2 LINE L2 2154 2303 -1011 231 192 0 19 chr20 18155780 18155832 -48512173 - LTR66 LTR ERVL -172 438 388 1454 248 95 114 chr20 18155832 18156456 -48511549 + L2 LINE L2 2303 2961 -353 674 222 111 0 chr20 18156506 18156659 -48511346 - MER20 DNA MER1_type -1 218 49 240 254 101 83 chr20 18156668 18156863 -48511142 + L2 LINE L2 2970 3171 -142 258 32 0 0 chr20 18156863 18156894 -48511111 + (CA)n Simple_repeat Simple_repeat 2 32 0 240 254 101 83 chr20 18156894 18156926 -48511079 + L2 LINE L2 3171 3201 -112 22 0 0 0 chr20 18157709 18157731 -48510274 + AT_rich Low_complexity Low_complexity 1 22 0 369 86 0 0 chr20 18158530 18158588 -48509417 + (CA)n Simple_repeat Simple_repeat 2 59 0 215 294 92 46 chr20 18159307 18159416 -48508589 + L2 LINE L2 3198 3311 -2 225 375 50 8 chr20 18159526 18159646 -48508359 + L2 LINE L2 3136 3260 -12 236 232 214 49 chr20 18159943 18160167 -48507838 - HAL1b LINE L1 -203 1145 885 * 1138 251 57 85 chr20 18160155 18160684 -48507321 - HAL1b LINE L1 -768 580 67 1758 134 11 0 chr20 18161867 18162129 -48505876 + MER2 DNA MER2_type 1 265 -80 434 215 38 0 chr20 18162174 18162253 -48505752 + MER2 DNA MER2_type 264 345 0 2033 122 0 45 chr20 18162800 18163111 -48504894 + AluSx SINE Alu 1 297 -15 1796 167 52 6 chr20 18163197 18163521 -48504484 + MER44D DNA MER2_type 1 609 0 207 86 0 29 chr20 18163879 18163914 -48504091 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 809 295 229 6 chr20 18164064 18164535 -48503470 + L2 LINE L2 2448 3016 -297 2056 122 78 23 chr20 18164566 18164911 -48503094 - THE1B LTR MaLR 0 364 1 486 75 0 0 chr20 18165468 18165535 -48502470 + (CA)n Simple_repeat Simple_repeat 2 68 0 262 257 152 0 chr20 18166519 18166624 -48501381 + MER5B DNA MER1_type 50 170 -8 315 318 24 0 chr20 18166742 18166827 -48501178 - L2 LINE L2 -4 3309 3223 475 219 10 0 chr20 18166932 18167028 -48500977 - Tigger3(Golem) DNA MER2_type 0 3029 2933 1254 147 20 32 chr20 18167035 18167287 -48500718 + L1MA8 LINE L1 5972 6220 -71 180 0 0 0 chr20 18167298 18167318 -48500687 + (TA)n Simple_repeat Simple_repeat 1 20 0 208 109 22 22 chr20 18167350 18167396 -48500609 + (TA)n Simple_repeat Simple_repeat 1 46 0 22 0 0 0 chr20 18167410 18167432 -48500573 + AT_rich Low_complexity Low_complexity 1 22 0 204 193 53 35 chr20 18167770 18167827 -48500178 + GA-rich Low_complexity Low_complexity 6 63 0 769 204 0 0 chr20 18167949 18168091 -48499914 + MER46A DNA MER2_type 3 144 -92 534 219 45 32 chr20 18169119 18169225 -48498780 + L1ME LINE L1 5548 5658 -512 1060 248 32 30 chr20 18169225 18169564 -48498441 + MER58B DNA MER1_type 2 341 0 534 219 45 32 chr20 18169564 18169612 -48498393 + L1ME LINE L1 5658 5704 -466 273 279 0 78 chr20 18169606 18169760 -48498245 - L1MC/D LINE L1 -1985 5823 5682 * 1015 165 24 0 chr20 18170005 18170175 -48497830 + FRAM SINE Alu 1 174 -2 234 0 0 0 chr20 18170369 18170395 -48497610 + (TG)n Simple_repeat Simple_repeat 2 27 0 834 246 99 4 chr20 18170677 18170949 -48497056 + MER5C DNA MER1_type 14 311 -13 747 155 8 23 chr20 18172441 18172570 -48495435 + FLAM_C SINE Alu 1 127 -6 651 183 0 78 chr20 18172774 18172916 -48495089 + FLAM_A SINE Alu 1 131 -2 235 200 0 93 chr20 18173526 18173676 -48494329 + (CAA)n Simple_repeat Simple_repeat 2 137 0 249 33 0 0 chr20 18173826 18173856 -48494149 + (GA)n Simple_repeat Simple_repeat 2 31 0 362 243 21 71 chr20 18173997 18174137 -48493868 + L1MEd LINE L1 1052 1184 -4935 27 0 0 0 chr20 18174218 18174245 -48493760 + AT_rich Low_complexity Low_complexity 1 27 0 330 289 33 33 chr20 18174495 18174675 -48493330 + HAL1b LINE L1 633 812 -536 254 274 74 91 chr20 18175505 18175680 -48492325 + L2 LINE L2 3076 3247 -25 2567 68 0 0 chr20 18177503 18177813 -48490192 + AluY SINE Alu 1 310 -1 1246 181 10 10 chr20 18178015 18178219 -48489786 + AluJo SINE Alu 81 284 -28 657 258 143 61 chr20 18178566 18179193 -48488812 + L1MC4 LINE L1 5301 5979 -1829 266 244 12 0 chr20 18179304 18179386 -48488619 + (TA)n Simple_repeat Simple_repeat 1 83 0 431 277 230 9 chr20 18179775 18179988 -48488017 + L1MC4 LINE L1 6672 6931 -854 22 0 0 0 chr20 18180146 18180168 -48487837 + AT_rich Low_complexity Low_complexity 1 22 0 836 154 0 0 chr20 18180178 18180295 -48487710 - FLAM_C SINE Alu -16 117 1 24 53 0 0 chr20 18180311 18180349 -48487656 + AT_rich Low_complexity Low_complexity 1 38 0 231 304 18 9 chr20 18180417 18180529 -48487476 + L1MC4 LINE L1 7122 7234 -808 558 0 0 0 chr20 18181046 18181108 -48486897 + (CAATA)n Simple_repeat Simple_repeat 1 62 0 345 311 19 10 chr20 18181558 18181661 -48486344 - MIR SINE MIR -156 106 3 189 330 179 9 chr20 18181702 18181808 -48486197 + L2 LINE L2 1145 1268 -2046 284 250 16 0 chr20 18183615 18183679 -48484326 + GA-rich Low_complexity Low_complexity 4 68 0 315 104 0 0 chr20 18183697 18183745 -48484260 + (CA)n Simple_repeat Simple_repeat 2 49 0 180 167 95 24 chr20 18184188 18184230 -48483775 - L2 LINE L2 -92 3221 3177 1903 120 69 0 chr20 18185248 18185524 -48482481 + AluSx SINE Alu 1 295 -17 21 36 0 0 chr20 18186007 18186035 -48481970 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr20 18186154 18186175 -48481830 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr20 18186457 18186493 -48481512 + AT_rich Low_complexity Low_complexity 1 36 0 1039 220 132 44 chr20 18186878 18186916 -48481089 + Charlie2 DNA MER1_type 68 101 -2761 2159 108 28 0 chr20 18186916 18187202 -48480803 + AluSq SINE Alu 1 294 -19 1039 220 132 44 chr20 18187202 18187549 -48480456 + Charlie2 DNA MER1_type 101 487 -2375 2021 183 25 129 chr20 18187578 18188261 -48479744 + LTR9 LTR ERV1 1 612 0 293 247 49 0 chr20 18188379 18188460 -48479545 + Charlie2a DNA MER1_type 1464 1548 -1314 1543 203 27 8 chr20 18188555 18188930 -48479075 + Charlie2a DNA MER1_type 1735 2116 -746 1600 245 67 16 chr20 18188963 18189604 -48478401 + Charlie2a DNA MER1_type 2189 2862 0 21 0 0 0 chr20 18190715 18190736 -48477269 + AT_rich Low_complexity Low_complexity 1 21 0 251 305 58 71 chr20 18190768 18190922 -48477083 + L2 LINE L2 3160 3311 -2 4161 155 48 73 chr20 18191149 18191316 -48476689 + L1MCa LINE L1 20 190 -6236 2831 83 3 0 chr20 18191316 18191679 -48476326 + THE1B LTR MaLR 1 364 0 4161 155 48 73 chr20 18191679 18192535 -48475470 + L1MCa LINE L1 190 1017 -5409 901 158 42 42 chr20 18192524 18192739 -48475266 + L1MCa LINE L1 1458 1672 -4754 * 382 196 0 0 chr20 18192730 18192822 -48475183 + L1MCa LINE L1 1880 1971 -4455 * 2462 218 37 15 chr20 18192821 18193239 -48474766 + L1MCa LINE L1 2259 2666 -3760 2294 111 0 13 chr20 18193239 18193555 -48474450 + AluSx SINE Alu 1 312 0 2462 218 37 15 chr20 18193555 18193924 -48474081 + L1MCa LINE L1 2666 3025 -3401 1988 147 3 10 chr20 18193924 18194230 -48473775 + AluJo SINE Alu 5 308 -4 2462 218 37 15 chr20 18194230 18194577 -48473428 + L1MCa LINE L1 3025 3422 -3004 4521 160 17 36 chr20 18194577 18195423 -48472582 + L1MC1 LINE L1 5446 6277 -56 1721 146 3 48 chr20 18195423 18195746 -48472259 - AluJb SINE Alu 0 310 1 4521 160 17 36 chr20 18195746 18195785 -48472220 + L1MC1 LINE L1 6277 6315 -18 765 220 77 10 chr20 18197030 18197239 -48470766 + MER58A DNA MER1_type 1 223 -1 367 275 46 15 chr20 18197244 18197375 -48470630 - MIR SINE MIR -38 224 90 207 0 0 0 chr20 18197503 18197526 -48470479 + (A)n Simple_repeat Simple_repeat 1 23 0 261 294 39 0 chr20 18198179 18198281 -48469724 - MER103 DNA DNA -50 116 11 276 264 0 14 chr20 18198330 18198402 -48469603 - L2 LINE L2 -3 3269 3199 279 342 15 85 chr20 18198503 18198702 -48469303 + MIR3 SINE MIR 12 196 -12 501 236 137 12 chr20 18199217 18199378 -48468627 + MIR SINE MIR 63 243 -19 183 302 0 0 chr20 18199935 18199988 -48468017 + L2 LINE L2 3219 3271 -1 970 232 54 5 chr20 18200166 18200390 -48467615 - MIR SINE MIR -20 242 8 2264 79 34 0 chr20 18201704 18201996 -48466009 - AluSc SINE Alu -7 302 1 276 317 101 10 chr20 18202017 18202132 -48465873 + MIR SINE MIR 3 130 -78 199 274 65 0 chr20 18202183 18202245 -48465760 + MIR3 SINE MIR 140 205 -3 1050 250 39 19 chr20 18203182 18203367 -48464638 + L1ME3A LINE L1 5415 5595 -575 2328 173 104 2 chr20 18203367 18203865 -48464140 + MER44D DNA MER2_type 2 605 0 1050 250 39 19 chr20 18203865 18204086 -48463919 + L1ME3A LINE L1 5595 5810 -360 2582 112 2 15 chr20 18204086 18204480 -48463525 + L1PA10 LINE L1 5774 6162 -6 1050 250 39 19 chr20 18204480 18204513 -48463492 + L1ME3A LINE L1 5810 5841 -329 1977 154 42 9 chr20 18204513 18204850 -48463155 + MER7A DNA MER2_type 1 346 0 1050 250 39 19 chr20 18204850 18205096 -48462909 + L1ME3A LINE L1 5841 6150 -20 420 360 6 12 chr20 18205275 18205436 -48462569 - MIR3 SINE MIR -7 201 42 359 240 47 8 chr20 18205617 18205746 -48462259 + L1ME3 LINE L1 6028 6161 -1 230 337 20 10 chr20 18206032 18206133 -48461872 - MER5A DNA MER1_type -50 139 38 1835 146 21 0 chr20 18206160 18206440 -48461565 - AluJo SINE Alu -26 286 1 352 288 135 18 chr20 18206824 18206994 -48461011 - MIR SINE MIR -15 247 58 241 271 47 78 chr20 18207806 18207935 -48460070 + MLT1K LTR MaLR 88 212 -376 265 306 163 22 chr20 18207936 18208292 -48459713 + MLT1K LTR MaLR 155 560 -28 272 328 132 0 chr20 18208529 18208703 -48459302 - MIR SINE MIR -21 241 45 254 209 75 0 chr20 18210225 18210292 -48457713 + MLT1H1 LTR MaLR 460 531 -24 275 250 0 0 chr20 18210653 18210709 -48457296 - L2 LINE L2 -71 3242 3187 300 234 0 0 chr20 18210804 18210868 -48457137 - L1MC4 LINE L1 -1339 6703 6640 513 237 25 0 chr20 18211115 18211233 -48456772 + L2 LINE L2 3191 3311 -2 209 250 0 0 chr20 18211233 18211277 -48456728 + GA-rich Low_complexity Low_complexity 1 44 0 2301 96 3 0 chr20 18211921 18212212 -48455793 + AluY SINE Alu 1 292 -19 807 276 100 0 chr20 18213896 18214237 -48453768 - LTR33A LTR ERVL 0 523 149 1922 152 0 0 chr20 18214386 18214662 -48453343 + AluJb SINE Alu 23 298 -14 431 213 213 24 chr20 18214669 18214796 -48453209 - MER5A DNA MER1_type -8 181 31 2226 139 7 89 chr20 18215036 18215219 -48452786 + MLT1B LTR MaLR 1 131 -259 2009 122 23 10 chr20 18215219 18215522 -48452483 + AluSq SINE Alu 5 311 -2 2226 139 7 89 chr20 18215522 18215763 -48452242 + MLT1B LTR MaLR 131 390 0 1813 183 0 3 chr20 18220645 18220940 -48447065 - AluJb SINE Alu -18 294 1 21 36 0 0 chr20 18221695 18221723 -48446282 + AT_rich Low_complexity Low_complexity 1 28 0 405 296 114 48 chr20 18223447 18223805 -48444200 - L1MC4 LINE L1 -1879 5929 5548 208 293 28 57 chr20 18224418 18224524 -48443481 + L2 LINE L2 3210 3312 -1 248 315 99 0 chr20 18224936 18225047 -48442958 - L1MC4 LINE L1 -2241 5567 5446 254 209 19 114 chr20 18225057 18225162 -48442843 - L1ME2 LINE L1 -1 6163 6067 287 284 28 18 chr20 18225169 18225278 -48442727 - L1MC4 LINE L1 -2384 5424 5315 345 298 62 45 chr20 18226027 18226205 -48441800 + L1ME LINE L1 5386 5566 -600 2198 240 39 28 chr20 18226325 18226971 -48441034 + L1ME3A LINE L1 5517 6169 -1 2068 117 20 7 chr20 18227882 18228181 -48439824 + AluSx SINE Alu 1 303 -9 241 203 54 40 chr20 18230071 18230145 -48437860 + GA-rich Low_complexity Low_complexity 1 75 0 1837 145 10 26 chr20 18231762 18232065 -48435940 + AluJb SINE Alu 1 298 -14 446 231 94 62 chr20 18233180 18233340 -48434665 + MIR SINE MIR 7 171 -91 2128 174 0 21 chr20 18233344 18233684 -48434321 - MER1B DNA MER1_type -4 333 1 1450 282 79 36 chr20 18233981 18234768 -48433237 - L1MC4a LINE L1 -745 5401 5151 21 0 0 0 chr20 18234899 18234920 -48433085 + AT_rich Low_complexity Low_complexity 1 21 0 2254 102 0 0 chr20 18235319 18235612 -48432393 + AluSg1 SINE Alu 1 293 -16 22 0 0 0 chr20 18236257 18236279 -48431726 + AT_rich Low_complexity Low_complexity 1 22 0 626 249 28 28 chr20 18236588 18236618 -48431387 - MIR SINE MIR -12 250 221 1072 183 0 83 chr20 18236618 18236818 -48431187 + MER6B DNA MER2_type 1 181 -684 2073 131 14 0 chr20 18236818 18237108 -48430897 + AluSx SINE Alu 1 294 -18 1072 183 0 83 chr20 18237108 18237136 -48430869 + MER6B DNA MER2_type 181 210 0 626 249 28 28 chr20 18237136 18237286 -48430719 - MIR SINE MIR -40 222 70 2356 101 0 3 chr20 18238326 18238633 -48429372 + AluSq SINE Alu 1 306 -7 231 88 0 0 chr20 18239522 18239556 -48428449 + (A)n Simple_repeat Simple_repeat 1 34 0 2368 92 16 0 chr20 18239558 18239864 -48428141 + AluSx SINE Alu 1 311 -1 21 57 0 0 chr20 18240012 18240047 -48427958 + AT_rich Low_complexity Low_complexity 1 35 0 637 266 6 12 chr20 18241688 18241861 -48426144 + MER5B DNA MER1_type 1 172 -6 336 263 132 13 chr20 18242364 18242516 -48425489 - MIR SINE MIR -46 216 47 238 349 83 12 chr20 18243976 18244145 -48423860 + MIR SINE MIR 76 256 -6 777 167 25 0 chr20 18244242 18244362 -48423643 - FLAM_A SINE Alu -10 123 1 535 225 146 13 chr20 18244488 18244639 -48423366 - MER5A DNA MER1_type -6 183 13 14279 134 13 113 chr20 18244673 18247849 -48420156 + L1PA7 LINE L1 12 2868 -3278 11758 73 2 1 chr20 18247849 18250136 -48417869 + L1PA7 LINE L1 3855 6154 0 33 0 0 0 chr20 18251266 18251299 -48416706 + AT_rich Low_complexity Low_complexity 1 33 0 278 227 67 13 chr20 18251461 18251536 -48416469 + MER91C DNA MER1_type 24 102 -38 1095 169 0 0 chr20 18252514 18252691 -48415314 - AluJb SINE Alu 0 312 136 350 252 27 68 chr20 18253921 18254068 -48413937 + L1MC5 LINE L1 5767 5907 -1901 365 296 128 49 chr20 18254141 18254619 -48413386 + L1MC5 LINE L1 6037 6596 -1221 2140 105 3 14 chr20 18254619 18254913 -48413092 + AluSp SINE Alu 1 291 -22 365 296 128 49 chr20 18254913 18255101 -48412904 + L1MC5 LINE L1 6596 6768 -1049 956 221 94 114 chr20 18255156 18255641 -48412364 + MLT1F1 LTR MaLR 1 500 -67 1854 168 3 3 chr20 18255641 18255950 -48412055 - AluJo SINE Alu -3 309 1 956 221 94 114 chr20 18255950 18256017 -48411988 + MLT1F1 LTR MaLR 500 567 0 1930 218 84 79 chr20 18256024 18256773 -48411232 + L1MC5 LINE L1 6850 7606 -355 2003 102 4 0 chr20 18256773 18257037 -48410968 + AluSq SINE Alu 38 302 -11 1930 218 84 79 chr20 18257037 18257226 -48410779 + L1MC5 LINE L1 7606 7793 -168 553 231 167 6 chr20 18258234 18258390 -48409615 + MER5A DNA MER1_type 9 189 0 22 0 0 0 chr20 18258498 18258520 -48409485 + AT_rich Low_complexity Low_complexity 1 22 0 30 0 0 0 chr20 18258893 18258923 -48409082 + AT_rich Low_complexity Low_complexity 1 30 0 2124 110 24 0 chr20 18258928 18259220 -48408785 + AluSq SINE Alu 1 299 -14 6795 172 32 6 chr20 18259341 18260598 -48407407 - L1MA4A LINE L1 -864 5282 3994 5956 112 46 8 chr20 18260601 18261561 -48406444 + L1MA4A LINE L1 5301 6296 -7 267 282 91 62 chr20 18261995 18262304 -48405701 + L2 LINE L2 2624 2941 -373 364 293 23 15 chr20 18262345 18262478 -48405527 + L2 LINE L2 3179 3312 -1 2125 144 3 6 chr20 18262640 18262953 -48405052 - AluSx SINE Alu 0 312 1 2352 156 43 19 chr20 18263662 18264079 -48403926 + MSTA LTR MaLR 1 427 -1 2411 143 13 0 chr20 18264081 18264453 -48403552 + MSTA-int LTR MaLR 2 378 -1273 1631 130 58 0 chr20 18264453 18264714 -48403291 + MSTA LTR MaLR 153 428 0 316 161 65 54 chr20 18265725 18265818 -48402187 - MER53 DNA DNA -1 188 95 978 276 10 7 chr20 18266588 18266878 -48401127 - LTR16A LTR ERVL -2 448 158 312 349 60 7 chr20 18267106 18267255 -48400750 + L3 LINE CR1 1356 1512 -65 701 296 87 35 chr20 18267256 18267898 -48400107 - L2 LINE L2 0 3313 2621 197 263 189 0 chr20 18268000 18268095 -48399910 + MER5A DNA MER1_type 77 189 0 929 186 5 59 chr20 18268320 18268524 -48399481 - MER105 DNA DNA -11 193 1 234 280 20 60 chr20 18268760 18268860 -48399145 - MIR SINE MIR -64 144 49 274 291 78 82 chr20 18269087 18269277 -48398728 + L2 LINE L2 2836 3025 -247 2204 122 10 0 chr20 18269277 18269581 -48398424 + AluSq SINE Alu 1 307 -6 274 291 78 82 chr20 18269581 18269802 -48398203 + L2 LINE L2 3025 3245 -27 243 0 0 0 chr20 18269804 18269831 -48398174 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 850 173 0 0 chr20 18270198 18270331 -48397674 + AluSq/x SINE Alu 1 133 -180 2285 106 0 0 chr20 18270332 18270624 -48397381 + AluSx SINE Alu 1 292 -20 216 284 90 0 chr20 18271123 18271190 -48396815 + MIR SINE MIR 47 119 -143 433 268 39 8 chr20 18271348 18271475 -48396530 - L2 LINE L2 -1 3312 3182 2123 114 0 0 chr20 18271713 18272026 -48395979 - AluSx SINE Alu 0 313 1 471 228 26 0 chr20 18272825 18272939 -48395066 + MER5B DNA MER1_type 6 122 -56 1547 168 26 68 chr20 18273333 18273685 -48394320 + MER1B DNA MER1_type 1 337 0 4870 17 0 0 chr20 18273991 18274534 -48393471 - L1PA2 LINE L1 -2 6153 5611 5742 18 0 7 chr20 18274534 18275431 -48392574 + L1PA2 LINE L1 4729 5619 -536 2001 141 16 7 chr20 18275475 18275780 -48392225 - AluJb SINE Alu -4 308 1 351 200 47 12 chr20 18275834 18275919 -48392086 + Charlie8 DNA MER1_type 58 145 -2272 2278 105 10 0 chr20 18276073 18276378 -48391627 - AluSq SINE Alu -5 308 1 345 224 12 0 chr20 18277619 18277698 -48390307 + Charlie1 DNA MER1_type 56 1446 -1315 26 0 0 0 chr20 18277740 18277766 -48390239 + AT_rich Low_complexity Low_complexity 1 26 0 1937 98 25 0 chr20 18277770 18278015 -48389990 - AluSq SINE Alu -62 251 1 551 244 9 0 chr20 18278676 18278791 -48389214 + MER52A LTR ERV1 3 118 -1637 7550 160 31 13 chr20 18278824 18280087 -48387918 + MER52A LTR ERV1 466 1751 -4 344 298 88 22 chr20 18280146 18280327 -48387678 - MIR SINE MIR -12 250 58 266 313 135 0 chr20 18281311 18281407 -48386598 + L2 LINE L2 3162 3270 -2 469 286 199 1 chr20 18281447 18281796 -48386209 + L2 LINE L2 2642 3065 -248 876 152 54 27 chr20 18281886 18282070 -48385935 + MER33 DNA MER1_type 1 189 -135 21 57 0 0 chr20 18282074 18282109 -48385896 + AT_rich Low_complexity Low_complexity 1 35 0 369 302 24 66 chr20 18282129 18282142 -48385863 - MIR SINE MIR -27 235 223 2231 104 3 0 chr20 18282142 18282429 -48385576 - AluSx SINE Alu -24 288 1 369 302 24 66 chr20 18282429 18282627 -48385378 - MIR SINE MIR -39 223 33 478 330 123 20 chr20 18282801 18283150 -48384855 - L2 LINE L2 -5 3308 2924 318 245 119 33 chr20 18283270 18283421 -48384584 + MLT1J2 LTR MaLR 73 236 -214 2026 131 20 3 chr20 18283574 18283871 -48384134 + AluSx SINE Alu 5 306 -6 26 0 0 0 chr20 18283946 18283972 -48384033 + AT_rich Low_complexity Low_complexity 1 26 0 266 105 26 0 chr20 18284014 18284052 -48383953 + Charlie8 DNA MER1_type 1379 1417 -1000 185 65 32 0 chr20 18284413 18284444 -48383561 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1594 164 0 48 chr20 18284449 18284741 -48383264 + AluJo SINE Alu 15 292 -20 743 212 45 87 chr20 18284747 18285044 -48382961 + L1MD3 LINE L1 6195 6359 0 1562 145 104 22 chr20 18285482 18285751 -48382254 + AluJb SINE Alu 9 299 -13 278 183 157 70 chr20 18285875 18285957 -48382048 - MER112 DNA MER1_type -4 256 160 2098 116 0 14 chr20 18285957 18286251 -48381754 + AluSx SINE Alu 1 290 -22 278 183 157 70 chr20 18286251 18286283 -48381722 - MER112 DNA MER1_type -100 160 132 2532 174 81 20 chr20 18286559 18287118 -48380887 + L1MD3 LINE L1 7402 7994 -1 320 286 98 8 chr20 18287539 18287672 -48380333 - L2 LINE L2 -8 3305 3161 265 220 85 59 chr20 18287787 18287905 -48380100 + MIR SINE MIR 108 228 -34 1795 38 0 0 chr20 18289145 18289354 -48378651 - L1PA4 LINE L1 -261 5893 5685 2360 18 0 4 chr20 18289354 18289626 -48378379 + L1PA4 LINE L1 5883 6155 0 21 0 0 0 chr20 18290040 18290061 -48377944 + AT_rich Low_complexity Low_complexity 1 21 0 663 209 0 7 chr20 18290100 18290239 -48377766 - Charlie1 DNA MER1_type -1 2760 2623 898 222 26 11 chr20 18290252 18290441 -48377564 - Charlie1 DNA MER1_type -2569 192 1 196 324 37 44 chr20 18290441 18290577 -48377428 - MIR3 SINE MIR -67 141 7 183 213 16 33 chr20 18290781 18290842 -48377163 + L2 LINE L2 2423 2482 -832 433 271 26 19 chr20 18290929 18291084 -48376921 + L1ME4a LINE L1 5962 6117 -4 608 248 64 15 chr20 18291461 18291663 -48376342 - MIR SINE MIR 0 262 51 371 246 98 16 chr20 18291730 18291852 -48376153 + MER3 DNA MER1_type 78 209 0 200 219 68 55 chr20 18292065 18292138 -48375867 + MIR SINE MIR 43 116 -92 2411 55 3 7 chr20 18292623 18292913 -48375092 + AluY SINE Alu 5 293 -18 184 200 0 0 chr20 18293270 18293305 -48374700 + L2 LINE L2 3227 3261 -11 192 260 10 73 chr20 18293366 18293462 -48374543 - MIR SINE MIR 0 262 173 1983 130 0 19 chr20 18293492 18293799 -48374206 + AluJo SINE Alu 12 312 0 347 235 88 47 chr20 18293835 18293858 -48374147 + MIR SINE MIR 86 107 -155 1836 168 45 31 chr20 18293858 18294216 -48373789 + MLT1A1 LTR MaLR 1 363 -2 347 235 88 47 chr20 18294216 18294362 -48373643 + MIR SINE MIR 107 262 0 225 0 0 0 chr20 18294920 18294945 -48373060 + (TG)n Simple_repeat Simple_repeat 2 26 0 227 296 42 21 chr20 18295044 18295186 -48372819 - L1ME LINE L1 -302 5819 5675 2201 92 14 0 chr20 18296581 18296874 -48371131 - AluY SINE Alu -14 297 1 23 0 0 0 chr20 18298149 18298172 -48369833 + GC_rich Low_complexity Low_complexity 1 23 0 189 147 0 0 chr20 18298741 18298775 -48369230 - MIR SINE MIR -119 143 110 2405 67 34 0 chr20 18299032 18299329 -48368676 - AluSx SINE Alu -5 307 1 209 306 194 0 chr20 18300492 18300626 -48367379 - MER5A DNA MER1_type -1 188 29 1824 147 0 33 chr20 18300725 18301031 -48366974 + AluSx SINE Alu 1 296 -16 282 307 29 15 chr20 18301078 18301215 -48366790 - MLT1H LTR MaLR -3 546 408 677 180 68 12 chr20 18301449 18301610 -48366395 + Charlie4 DNA MER1_type 1788 1957 -4 411 73 0 0 chr20 18301663 18301718 -48366287 + (TA)n Simple_repeat Simple_repeat 2 56 0 2588 58 6 6 chr20 18301720 18302033 -48365972 - AluSq SINE Alu 0 313 1 187 200 0 80 chr20 18302313 18302363 -48365642 + MIR SINE MIR 98 143 -119 2247 124 0 0 chr20 18302820 18303127 -48364878 - AluSx SINE Alu -5 307 1 188 370 43 27 chr20 18303577 18303761 -48364244 - L2 LINE L2 -222 3050 2864 1073 270 61 40 chr20 18303789 18304267 -48363738 + MLT1H LTR MaLR 39 526 -23 231 297 16 0 chr20 18306132 18306196 -48361809 - MIR SINE MIR -158 104 40 2625 139 110 0 chr20 18306365 18306803 -48361202 - MER66B LTR ERV1 0 486 1 294 29 0 0 chr20 18306944 18306979 -48361026 + (CA)n Simple_repeat Simple_repeat 1 35 0 * 342 0 0 0 chr20 18306978 18307016 -48360989 + (TC)n Simple_repeat Simple_repeat 2 39 0 492 219 71 17 chr20 18307060 18307207 -48360798 - L1ME3 LINE L1 0 6164 6018 2765 205 88 14 chr20 18307240 18307903 -48360102 - L1ME1 LINE L1 -7 6159 5448 423 0 0 0 chr20 18308359 18308406 -48359599 + (CA)n Simple_repeat Simple_repeat 2 48 0 28 48 0 0 chr20 18308870 18308912 -48359093 + AT_rich Low_complexity Low_complexity 1 42 0 820 277 175 37 chr20 18309302 18309328 -48358677 - MLT1J LTR MaLR -52 459 438 2051 125 33 10 chr20 18309328 18309633 -48358372 + AluSx SINE Alu 1 312 0 820 277 175 37 chr20 18309633 18310007 -48357998 - MLT1J LTR MaLR -73 438 4 2104 114 3 43 chr20 18310084 18310408 -48357597 - AluSx SINE Alu -1 311 1 662 244 60 78 chr20 18310443 18310762 -48357243 - L1ME3 LINE L1 -2177 5631 5319 1816 167 3 0 chr20 18310914 18311227 -48356778 + AluSx SINE Alu 2 315 0 1960 133 65 47 chr20 18312239 18312622 -48355383 + MLT1B LTR MaLR 1 390 0 994 265 105 8 chr20 18312709 18313082 -48354923 - LTR16A LTR ERVL -25 425 17 391 191 24 24 chr20 18313425 18313509 -48354496 - MLT1K LTR MaLR -493 95 12 283 278 150 8 chr20 18313523 18313656 -48354349 + MIR SINE MIR 40 191 -71 345 283 18 0 chr20 18313656 18313769 -48354236 + (TA)n Simple_repeat Simple_repeat 2 116 0 1616 191 17 0 chr20 18313929 18314217 -48353788 + AluJo SINE Alu 1 293 -19 1768 101 97 4 chr20 18314318 18314596 -48353409 - AluSx SINE Alu 0 302 1 32 0 0 0 chr20 18314643 18314675 -48353330 + AT_rich Low_complexity Low_complexity 1 32 0 3347 150 19 78 chr20 18316098 18316818 -48351187 - L1MB3 LINE L1 -16 6167 5490 21 36 0 0 chr20 18317119 18317147 -48350858 + AT_rich Low_complexity Low_complexity 1 28 0 534 282 84 29 chr20 18317167 18317739 -48350266 + L1M4 LINE L1 5219 5817 -361 189 107 0 0 chr20 18318118 18318146 -48349859 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 4936 195 31 61 chr20 18318296 18318644 -48349361 + L1MB7 LINE L1 4029 4386 -1798 1789 173 0 16 chr20 18318644 18318957 -48349048 + AluSx SINE Alu 1 308 -4 4936 195 31 61 chr20 18318957 18320472 -48347533 + L1MB7 LINE L1 4386 5818 -366 964 175 0 29 chr20 18320472 18320643 -48347362 + FRAM SINE Alu 1 166 0 4936 195 31 61 chr20 18320643 18320990 -48347015 + L1MB7 LINE L1 5818 6174 -10 1076 127 0 0 chr20 18321548 18321690 -48346315 + AluSx SINE Alu 1 142 -170 1082 171 0 0 chr20 18321906 18322076 -48345929 + AluSx SINE Alu 129 298 -14 24 0 0 0 chr20 18322432 18322456 -48345549 + AT_rich Low_complexity Low_complexity 1 24 0 242 131 0 3 chr20 18322997 18323127 -48344878 + AluSq SINE Alu 131 292 -10 2371 90 3 3 chr20 18323907 18324207 -48343798 + AluSg SINE Alu 1 300 -10 1559 130 157 0 chr20 18324867 18325128 -48342877 - AluSx SINE Alu 0 302 1 506 248 8 8 chr20 18325186 18325311 -48342694 + L1MD2 LINE L1 6225 6349 -10 24 0 0 0 chr20 18325340 18325364 -48342641 + AT_rich Low_complexity Low_complexity 1 24 0 582 236 8 0 chr20 18325526 18325649 -48342356 - FLAM_A SINE Alu -9 124 1 258 262 0 16 chr20 18325649 18325710 -48342295 - L2 LINE L2 -6 3307 3248 343 247 34 0 chr20 18327097 18327186 -48340819 + MIR SINE MIR 86 177 -85 1605 184 39 0 chr20 18327293 18327408 -48340597 + AluJb SINE Alu 1 110 -202 180 0 0 0 chr20 18327408 18327428 -48340577 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1605 184 39 0 chr20 18327428 18327595 -48340410 + AluJb SINE Alu 110 294 -18 258 301 12 0 chr20 18327713 18327796 -48340209 + (TA)n Simple_repeat Simple_repeat 2 85 0 601 278 62 9 chr20 18328447 18328674 -48339331 - MIR SINE MIR -3 259 21 1171 199 124 4 chr20 18328731 18328997 -48339008 + AluJo SINE Alu 2 299 -3 582 246 67 97 chr20 18329777 18330159 -48337846 - MLT1J LTR MaLR 0 511 220 1738 244 95 18 chr20 18330292 18330840 -48337165 + MLT1G LTR MaLR 1 590 0 577 262 30 10 chr20 18331617 18331944 -48336061 - MLT1I LTR MaLR -2 407 47 186 324 14 14 chr20 18332191 18332265 -48335740 + MIR SINE MIR 55 128 -80 499 250 207 9 chr20 18333523 18333755 -48334250 + L1ME3A LINE L1 5827 6104 -66 254 333 155 32 chr20 18333842 18334061 -48333944 + L2 LINE L2 3021 3266 -6 543 336 151 36 chr20 18334250 18335167 -48332838 + L2 LINE L2 1845 2866 -448 2183 110 3 0 chr20 18335213 18335519 -48332486 + AluSx SINE Alu 2 308 0 296 261 77 23 chr20 18337006 18337136 -48330869 + MLT1K LTR MaLR 341 477 -111 363 284 11 0 chr20 18337423 18337518 -48330487 - MIR SINE MIR -140 122 27 322 206 0 0 chr20 18338847 18338915 -48329090 + MER5A DNA MER1_type 42 109 -80 806 220 17 0 chr20 18338974 18339151 -48328854 - MER5A DNA MER1_type 0 189 10 861 176 111 42 chr20 18339182 18339444 -48328561 - MER5C DNA MER1_type -18 306 27 1401 199 126 65 chr20 18339448 18339695 -48328310 + Charlie1b DNA MER1_type 1 232 -2529 1577 164 49 28 chr20 18339695 18339981 -48328024 + AluJo SINE Alu 1 292 -20 1401 199 126 65 chr20 18339981 18340226 -48327779 + Charlie1b DNA MER1_type 232 523 0 247 303 147 24 chr20 18340453 18340664 -48327341 - MLT1L LTR MaLR 0 615 379 444 214 45 13 chr20 18340747 18340889 -48327116 - MLT1L LTR MaLR -365 146 1 284 250 15 0 chr20 18340896 18340964 -48327041 + L2 LINE L2 3204 3272 0 325 278 135 35 chr20 18341334 18341622 -48326383 - L1ME4a LINE L1 -47 6074 5758 1212 296 75 12 chr20 18341659 18342088 -48325917 - LTR16B LTR ERVL 0 464 9 1161 221 91 27 chr20 18342634 18342964 -48325041 - LTR16A1 LTR ERVL -16 441 91 399 68 0 149 chr20 18342970 18342988 -48325017 - LTR26B LTR ERV1 -339 192 173 2170 136 0 13 chr20 18342988 18343304 -48324701 + AluSx SINE Alu 1 312 0 399 68 0 149 chr20 18343304 18343359 -48324646 - LTR26B LTR ERV1 -358 173 130 2213 108 0 14 chr20 18343359 18343655 -48324350 + AluSx SINE Alu 1 292 -20 3106 143 0 41 chr20 18343695 18343942 -48324063 + LTR26B LTR ERV1 41 258 -273 2534 49 0 7 chr20 18343942 18344248 -48323757 + AluY SINE Alu 1 304 -7 3106 143 0 41 chr20 18344248 18344512 -48323493 + LTR26B LTR ERV1 258 531 0 652 217 32 95 chr20 18344516 18344705 -48323300 - MLT1J LTR MaLR -236 275 99 212 339 68 36 chr20 18345010 18345231 -48322774 - L2 LINE L2 -213 3059 2832 746 260 17 0 chr20 18345325 18345502 -48322503 - AluJo SINE Alu -14 298 119 531 257 30 83 chr20 18345502 18345814 -48322191 + LTR16C LTR ERVL 107 478 -13 184 255 0 0 chr20 18345938 18345985 -48322020 + L2 LINE L2 3267 3313 0 865 183 116 88 chr20 18346432 18346490 -48321515 + LTR8A LTR ERV1 287 342 -385 1442 181 61 20 chr20 18346490 18346783 -48321222 + AluJo SINE Alu 1 305 -7 865 183 116 88 chr20 18346783 18347094 -48320911 + LTR8A LTR ERV1 342 727 0 4202 126 12 66 chr20 18347985 18348379 -48319626 - LTR8 LTR ERV1 0 691 352 2362 44 30 14 chr20 18348379 18348674 -48319331 - AluY SINE Alu -11 300 1 4202 126 12 66 chr20 18348674 18349009 -48318996 - LTR8 LTR ERV1 -339 352 1 338 236 154 0 chr20 18349214 18349324 -48318681 + MIR SINE MIR 13 139 -123 261 0 0 0 chr20 18349565 18349594 -48318411 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 583 154 116 95 chr20 18349768 18350182 -48317823 + LTR29 LTR ERV1 1 563 -59 200 143 24 0 chr20 18350384 18350426 -48317579 + CT-rich Low_complexity Low_complexity 1 43 0 2277 96 20 0 chr20 18350762 18351054 -48316951 + AluSg SINE Alu 13 310 0 4012 179 8 19 chr20 18351222 18351651 -48316354 + MER72 LTR ERV1 9 428 -294 1567 178 74 4 chr20 18351651 18351921 -48316084 - AluJb SINE Alu -23 289 1 4012 179 8 19 chr20 18351921 18352213 -48315792 + MER72 LTR ERV1 428 722 0 2769 120 9 21 chr20 18352595 18352830 -48315175 - MSTA LTR MaLR 0 428 199 2234 112 0 3 chr20 18352830 18353133 -48314872 - AluSg SINE Alu -8 302 1 2769 120 9 21 chr20 18353133 18353329 -48314676 - MSTA LTR MaLR -229 199 2 751 287 163 0 chr20 18354305 18354643 -48313362 - LTR16C LTR ERVL -92 399 7 1084 119 55 82 chr20 18354881 18355100 -48312905 - AluSg/x SINE Alu -16 294 82 304 330 63 6 chr20 18355255 18355412 -48312593 - MIR SINE MIR -54 208 45 1192 265 85 9 chr20 18355845 18356268 -48311737 - LTR16A1 LTR ERVL -2 455 1 2087 113 0 52 chr20 18356336 18356646 -48311359 + AluSg SINE Alu 1 294 -16 556 247 263 28 chr20 18357326 18357775 -48310230 + LTR50 LTR ERVL 25 670 -125 263 296 56 0 chr20 18357857 18357965 -48310040 - MIR SINE MIR -72 190 77 2787 238 59 1 chr20 18358041 18358712 -48309293 - L1MC4 LINE L1 -17 6149 5449 533 180 33 40 chr20 18358849 18358999 -48309006 + MIR SINE MIR 114 262 0 2228 93 34 0 chr20 18359122 18359413 -48308592 - AluSp SINE Alu -12 301 1 1980 171 57 50 chr20 18360169 18360396 -48307609 + MLT1C LTR MaLR 8 232 -235 2107 128 7 0 chr20 18360396 18360694 -48307311 - AluSx SINE Alu -12 300 1 1980 171 57 50 chr20 18360694 18360923 -48307082 + MLT1C LTR MaLR 232 467 0 511 236 16 8 chr20 18360958 18361085 -48306920 - MIR SINE MIR -46 216 89 1337 195 0 0 chr20 18361184 18361405 -48306600 - AluJb SINE Alu -91 221 1 380 230 0 0 chr20 18361485 18361559 -48306446 - L1ME3 LINE L1 -24 6138 6065 2368 75 0 16 chr20 18361642 18361948 -48306057 - AluY SINE Alu -10 301 1 2454 43 0 0 chr20 18362146 18362453 -48305552 - AluY SINE Alu 0 307 1 200 280 0 0 chr20 18362469 18362519 -48305486 + (CA)n Simple_repeat Simple_repeat 1 50 0 5003 139 22 1 chr20 18364079 18364846 -48303159 - LTR39 LTR ERV1 0 783 1 536 302 115 13 chr20 18364880 18365115 -48302890 + LTR16C LTR ERVL 96 354 -137 585 234 31 63 chr20 18365367 18365653 -48302352 - MER34 LTR ERV1 -5 537 261 811 161 0 15 chr20 18365687 18365817 -48302188 - FLAM_C SINE Alu -13 130 3 630 207 88 101 chr20 18365821 18366112 -48301893 - MER34 LTR ERV1 -276 309 1 612 62 0 0 chr20 18366424 18366505 -48301500 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 426 252 102 14 chr20 18366531 18366678 -48301327 - MLT1L LTR MaLR -22 593 434 2123 101 0 7 chr20 18368394 18368681 -48299324 + AluSx SINE Alu 1 285 -27 198 0 0 0 chr20 18368688 18368710 -48299295 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 1771 168 3 10 chr20 18368719 18369022 -48298983 + AluJb SINE Alu 1 301 -11 733 291 180 43 chr20 18369254 18369721 -48298284 + MLT1K LTR MaLR 18 548 -40 280 308 9 19 chr20 18369742 18369849 -48298156 + L2 LINE L2 2494 2599 -715 1850 246 18 16 chr20 18369919 18370418 -48297587 - L1MD2 LINE L1 0 7797 6194 635 238 89 35 chr20 18370423 18370625 -48297380 - MER58C DNA MER1_type 0 215 3 1767 206 26 70 chr20 18370733 18370776 -48297229 - MLT2D LTR ERVL 0 515 472 243 61 0 0 chr20 18370776 18370809 -48297196 + (TG)n Simple_repeat Simple_repeat 2 34 0 1767 206 26 70 chr20 18370809 18371198 -48296807 - MLT2D LTR ERVL -43 472 3 347 321 19 77 chr20 18371200 18371302 -48296703 + L2 LINE L2 2780 2865 -449 1047 203 11 0 chr20 18371302 18371489 -48296516 - MER5A DNA MER1_type 0 189 1 347 321 19 77 chr20 18371489 18371595 -48296410 + L2 LINE L2 2865 2976 -338 588 261 128 6 chr20 18371617 18371645 -48296360 + MER63A DNA MER1_type 9 32 -1656 207 0 0 0 chr20 18371645 18371668 -48296337 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 588 261 128 6 chr20 18371668 18371819 -48296186 + MER63A DNA MER1_type 32 210 0 473 216 235 28 chr20 18371830 18372085 -48295920 + L2 LINE L2 3006 3313 0 249 327 9 65 chr20 18372093 18372200 -48295805 + L2 LINE L2 3122 3222 -50 343 194 0 65 chr20 18372218 18372305 -48295700 - FLAM_A SINE Alu -6 127 65 277 191 48 0 chr20 18372485 18372548 -48295457 + LTR16C LTR ERVL 426 491 0 557 276 105 22 chr20 18373759 18373987 -48294018 + MIR SINE MIR 4 250 -12 931 100 0 29 chr20 18374067 18374207 -48293798 - AluSg/x SINE Alu -3 309 174 494 159 0 0 chr20 18374207 18374276 -48293729 - AluS SINE Alu -242 70 2 2176 141 0 0 chr20 18374684 18374990 -48293015 + AluSx SINE Alu 1 306 -6 1334 154 62 41 chr20 18375149 18375279 -48292726 - MER33 DNA MER1_type -2261 324 198 1800 177 0 7 chr20 18375279 18375589 -48292416 - AluJo SINE Alu -4 308 1 1334 154 62 41 chr20 18375589 18375781 -48292224 - MER33 DNA MER1_type -2387 198 1 825 143 0 0 chr20 18376044 18376163 -48291842 - FLAM_C SINE Alu -20 123 5 28 22 0 22 chr20 18376170 18376198 -48291807 + AT_rich Low_complexity Low_complexity 1 29 -16 2212 107 3 0 chr20 18376198 18376488 -48291517 - AluSx SINE Alu -21 291 1 28 22 0 22 chr20 18376488 18376505 -48291500 + AT_rich Low_complexity Low_complexity 29 45 0 634 322 44 11 chr20 18377315 18377495 -48290510 - MER91A DNA MER1_type -9 187 2 1992 141 7 3 chr20 18377682 18377980 -48290025 - AluSx SINE Alu -13 299 1 790 285 94 40 chr20 18378862 18379140 -48288865 + LTR16C LTR ERVL 1 309 -182 763 188 50 17 chr20 18379140 18379321 -48288684 - MER53 DNA DNA -1 188 2 790 285 94 40 chr20 18379321 18379446 -48288559 + LTR16C LTR ERVL 309 426 -65 890 229 79 55 chr20 18379447 18379739 -48288266 - LTR16A1 LTR ERVL -3 454 156 196 245 0 20 chr20 18379944 18379993 -48288012 + L2 LINE L2 3262 3309 -4 1897 265 43 24 chr20 18381109 18381693 -48286312 + L1ME3A LINE L1 5555 6149 -21 2348 105 0 19 chr20 18381695 18382010 -48285995 - AluSc SINE Alu 0 309 1 2798 100 13 15 chr20 18382015 18382406 -48285599 - L1PA10 LINE L1 -9 6159 5770 11201 128 2 3 chr20 18382406 18384098 -48283907 - L1PA10 LINE L1 -1105 5041 3353 1900 159 0 17 chr20 18384288 18384589 -48283416 - AluJo SINE Alu -16 296 1 804 219 156 92 chr20 18384693 18385143 -48282862 - MER66A LTR ERV1 -10 599 99 667 242 0 0 chr20 18385297 18385421 -48282584 - FLAM_A SINE Alu -8 125 2 2010 141 13 13 chr20 18385439 18385751 -48282254 + AluSx SINE Alu 1 312 0 32 0 0 0 chr20 18385914 18385946 -48282059 + AT_rich Low_complexity Low_complexity 1 32 0 1655 158 4 8 chr20 18385953 18386213 -48281792 - AluSx SINE Alu -36 276 18 1882 206 40 88 chr20 18387899 18388056 -48279949 - MER34 LTR ERV1 0 542 379 438 160 28 57 chr20 18388056 18388162 -48279843 + L1PA12 LINE L1 6066 6168 0 1882 206 40 88 chr20 18388162 18388573 -48279432 - MER34 LTR ERV1 -163 379 1 195 292 21 0 chr20 18388719 18388767 -48279238 - L2 LINE L2 -66 3247 3199 441 58 0 0 chr20 18388817 18388869 -48279136 - Alu SINE Alu -257 53 2 428 234 37 0 chr20 18388869 18388976 -48279029 - L1MC4 LINE L1 -149 7893 7783 294 307 83 50 chr20 18388976 18389217 -48278788 - L2 LINE L2 -171 3101 2853 215 299 102 45 chr20 18389243 18389400 -48278605 - L2 LINE L2 -2170 1144 979 957 255 109 39 chr20 18389818 18389938 -48278067 - L1MC4 LINE L1 -5 8037 7927 1719 139 94 0 chr20 18389938 18390205 -48277800 - AluSx SINE Alu -20 292 1 957 255 109 39 chr20 18390205 18390496 -48277509 - L1MC4 LINE L1 -115 7927 7597 2341 96 0 3 chr20 18390697 18391000 -48277005 - AluSq SINE Alu -11 302 1 27 29 0 0 chr20 18391280 18391314 -48276691 + AT_rich Low_complexity Low_complexity 1 34 0 189 0 0 0 chr20 18391355 18391376 -48276629 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 21 57 0 0 chr20 18391729 18391764 -48276241 + AT_rich Low_complexity Low_complexity 1 35 0 2199 30 0 19 chr20 18391951 18392216 -48275789 - AluY SINE Alu -51 260 1 1832 133 47 4 chr20 18392352 18392631 -48275374 + AluSx SINE Alu 6 296 -16 2370 87 6 0 chr20 18395265 18395576 -48272429 - AluSp SINE Alu 0 313 1 903 40 0 0 chr20 18395591 18395692 -48272313 - HY3 scRNA scRNA 0 101 1 2187 141 0 0 chr20 18395904 18396210 -48271795 + AluSx SINE Alu 1 306 -6 21 0 0 0 chr20 18396286 18396307 -48271698 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 18396382 18396403 -48271602 + AT_rich Low_complexity Low_complexity 1 21 0 402 57 0 0 chr20 18396573 18396626 -48271379 + (CA)n Simple_repeat Simple_repeat 1 53 0 298 276 89 48 chr20 18396751 18397066 -48270939 + HAL1 LINE L1 1110 1437 -1070 736 267 53 9 chr20 18397217 18397505 -48270500 + MLT1H1 LTR MaLR 1 312 -278 2510 83 0 10 chr20 18397675 18397987 -48270018 - AluSq SINE Alu -4 309 1 405 58 0 0 chr20 18398013 18398065 -48269940 + (TA)n Simple_repeat Simple_repeat 2 53 0 1949 239 107 2 chr20 18398338 18398816 -48269189 + MER74A LTR ERVL 1 528 -30 2180 211 147 30 chr20 18398980 18399511 -48268494 + MLT1G1 LTR MaLR 1 593 -2 317 184 69 58 chr20 18399627 18399714 -48268291 - MER5B DNA MER1_type -69 109 22 325 255 19 38 chr20 18399719 18399825 -48268180 + MER5B DNA MER1_type 75 178 0 495 188 21 0 chr20 18399917 18400013 -48267992 - MER5A DNA MER1_type -83 106 9 334 213 107 13 chr20 18400637 18400712 -48267293 + MER58C DNA MER1_type 7 88 -127 385 271 39 23 chr20 18400771 18400900 -48267105 + MER58C DNA MER1_type 85 215 0 1831 144 17 114 chr20 18401041 18401445 -48266560 + MLT1A1 LTR MaLR 1 365 0 787 268 116 33 chr20 18401746 18402108 -48265897 - MLT1J2 LTR MaLR 0 450 59 1031 246 43 7 chr20 18402108 18402413 -48265592 + L1ME3A LINE L1 5850 6165 -5 2127 204 53 92 chr20 18403189 18404062 -48263943 + L1MC5 LINE L1 7091 7929 -32 665 248 75 91 chr20 18404070 18404509 -48263496 + HsTC2 DNA Tc2 1291 1898 0 280 309 198 0 chr20 18404942 18405068 -48262937 - MIR3 SINE MIR -24 184 34 663 200 44 19 chr20 18405103 18405263 -48262742 - LTR16A1 LTR ERVL -12 445 282 625 167 19 9 chr20 18405312 18405420 -48262585 + MLT1B LTR MaLR 1 109 -281 1759 166 16 95 chr20 18405690 18405912 -48262093 + MLT1B LTR MaLR 1 176 -214 1943 153 3 7 chr20 18405912 18406232 -48261773 + AluSx SINE Alu 1 312 0 1759 166 16 95 chr20 18406232 18406432 -48261573 + MLT1B LTR MaLR 176 390 0 243 250 12 38 chr20 18406441 18406521 -48261484 - LTR16A1 LTR ERVL -332 125 48 1591 170 83 7 chr20 18406972 18407261 -48260744 - AluJo SINE Alu -1 311 1 489 263 13 19 chr20 18407776 18407932 -48260073 + MER69A DNA AcHobo 21 175 -2 1031 169 29 124 chr20 18408209 18408291 -48259714 + MER20 DNA MER1_type 1 89 -130 1515 191 21 17 chr20 18408291 18408579 -48259426 - AluJo SINE Alu -23 289 1 1031 169 29 124 chr20 18408579 18408738 -48259267 + MER20 DNA MER1_type 89 219 0 473 289 7 40 chr20 18408819 18408968 -48259037 + MIR SINE MIR 119 262 0 194 279 15 44 chr20 18409402 18409470 -48258535 + MIR3 SINE MIR 105 170 -38 251 200 20 0 chr20 18410499 18410549 -48257456 - MER115 DNA AcHobo -2 691 641 1199 322 60 6 chr20 18410600 18410966 -48257039 - MER115 DNA AcHobo -307 386 1 356 303 130 23 chr20 18411015 18411082 -48256923 - L1MC4a LINE L1 -329 5792 5734 2730 184 7 41 chr20 18411082 18411620 -48256385 + MLT2B1 LTR ERVL 1 520 0 356 303 130 23 chr20 18411620 18411818 -48256187 - L1MC4a LINE L1 -387 5734 5571 * 413 262 104 43 chr20 18411809 18412049 -48255956 + L1MC/D LINE L1 5365 5610 -556 375 188 141 8 chr20 18413728 18413856 -48254149 - L1MC5 LINE L1 -916 7045 6901 2166 128 0 0 chr20 18413880 18414178 -48253827 - AluSx SINE Alu -14 298 1 939 165 51 0 chr20 18414212 18414370 -48253635 - AluJb SINE Alu -15 297 132 211 178 44 22 chr20 18414664 18414709 -48253296 - L2 LINE L2 -18 3295 3250 215 322 85 0 chr20 18415453 18415512 -48252493 + MIR SINE MIR 34 97 -165 1297 267 48 36 chr20 18415513 18415605 -48252400 - LTR16C LTR ERVL 0 491 402 2408 93 3 0 chr20 18415605 18415907 -48252098 + AluSg SINE Alu 1 303 -7 1297 267 48 36 chr20 18415907 18416230 -48251775 - LTR16C LTR ERVL -89 402 71 291 306 41 0 chr20 18416279 18416377 -48251628 + MIR SINE MIR 96 197 -65 1051 287 32 36 chr20 18417343 18417754 -48250251 - MLT1I LTR MaLR 0 409 1 751 217 22 56 chr20 18417881 18418061 -48249944 + MER3 DNA MER1_type 1 127 -82 321 303 8 82 chr20 18418176 18418409 -48249596 - MIR SINE MIR -46 216 4 540 254 18 0 chr20 18418702 18418812 -48249193 + MER81 DNA DNA 1 112 -2 510 211 92 0 chr20 18420349 18420458 -48247547 + MER5B DNA MER1_type 59 177 -1 598 252 129 0 chr20 18421150 18421305 -48246700 + MIR3 SINE MIR 33 207 -1 534 216 76 87 chr20 18421305 18421569 -48246436 - Charlie4a DNA MER1_type -24 484 224 734 253 185 43 chr20 18421594 18422037 -48245968 + MER90 LTR ERV1 52 557 -18 297 186 0 34 chr20 18422038 18422097 -48245908 - Charlie4a DNA MER1_type -283 225 169 228 338 0 15 chr20 18422100 18422168 -48245837 - MIR SINE MIR -188 74 8 295 125 175 125 chr20 18422595 18422675 -48245330 + MLT1B LTR MaLR 1 84 -306 1001 156 39 49 chr20 18422693 18422898 -48245107 + MLT1B LTR MaLR 188 390 0 219 88 0 0 chr20 18422976 18423010 -48244995 + (TTG)n Simple_repeat Simple_repeat 1 34 0 719 122 24 32 chr20 18423011 18423134 -48244871 + LOR1a LTR ERV1 50 171 -326 1365 147 5 13 chr20 18423139 18423363 -48244642 + LOR1a LTR ERV1 276 497 0 1687 121 31 170 chr20 18423434 18423445 -48244560 - MER63B DNA MER1_type -669 393 382 803 195 0 0 chr20 18423445 18423563 -48244442 - FLAM_C SINE Alu -15 118 1 1687 121 31 170 chr20 18423563 18423664 -48244341 - MER63B DNA MER1_type -680 382 269 2245 117 0 0 chr20 18423664 18423955 -48244050 + AluSg SINE Alu 6 296 -14 1687 121 31 170 chr20 18423955 18424288 -48243717 - MER63B DNA MER1_type -793 269 9 629 216 65 13 chr20 18425233 18425386 -48242619 - MER5B DNA MER1_type -11 167 7 588 150 235 39 chr20 18425397 18425550 -48242455 + MER5A DNA MER1_type 4 186 -3 202 267 47 58 chr20 18426494 18426580 -48241425 - MIR SINE MIR 0 262 178 2121 104 21 7 chr20 18426594 18426883 -48241122 - AluSx SINE Alu -19 293 1 230 323 61 10 chr20 18426943 18427042 -48240963 - L1ME3A LINE L1 -67 6103 6000 2838 167 16 14 chr20 18427088 18427591 -48240414 - L1MB3 LINE L1 -1 6182 5679 2289 113 0 0 chr20 18427709 18428009 -48239996 - AluSg SINE Alu -10 300 1 232 274 83 0 chr20 18428018 18428102 -48239903 - MIR SINE MIR -54 208 118 699 319 74 53 chr20 18428653 18429088 -48238917 - L2 LINE L2 -1 3312 2869 1831 124 54 7 chr20 18429231 18429529 -48238476 + AluSx SINE Alu 1 312 0 2374 111 47 39 chr20 18429860 18430221 -48237784 + THE1B LTR MaLR 1 364 0 12140 82 8 2 chr20 18430221 18431781 -48236224 + THE1B-int LTR MaLR 1 1569 -11 2164 124 48 37 chr20 18431790 18432145 -48235860 + THE1B LTR MaLR 1 359 -5 2255 73 43 7 chr20 18432147 18432447 -48235558 + AluY SINE Alu 1 311 0 228 258 30 0 chr20 18432522 18432588 -48235417 + L1MC4a LINE L1 7358 7425 -383 520 220 9 0 chr20 18432606 18432715 -48235290 + L1MC4 LINE L1 7547 7656 -386 1995 133 174 16 chr20 18433096 18433464 -48234541 + MSTB1 LTR MaLR 3 428 -4 426 241 108 54 chr20 18434227 18434393 -48233612 - MLT1H LTR MaLR 0 549 375 1967 156 3 0 chr20 18434659 18434948 -48233057 - AluSx SINE Alu -18 294 5 256 318 111 8 chr20 18435089 18435215 -48232790 + MIR3 SINE MIR 38 176 -32 2052 171 18 38 chr20 18437989 18438382 -48229623 + MLT1B LTR MaLR 1 385 -5 200 320 117 10 chr20 18438509 18438612 -48229393 + MIR SINE MIR 121 234 -28 2223 206 44 59 chr20 18440417 18440983 -48227022 - L1ME3A LINE L1 -5 6165 5609 2195 126 7 0 chr20 18440983 18441285 -48226720 - AluSq SINE Alu -9 304 1 2223 206 44 59 chr20 18441285 18441360 -48226645 - L1ME3A LINE L1 -561 5609 5534 494 262 174 88 chr20 18442307 18442507 -48225498 + MLT1J LTR MaLR 3 184 -327 1822 131 57 34 chr20 18442507 18442804 -48225201 + AluJo SINE Alu 1 304 -8 494 262 174 88 chr20 18442804 18443069 -48224936 + MLT1J LTR MaLR 184 508 -3 802 306 84 51 chr20 18443459 18443927 -48224078 + MLT1G1 LTR MaLR 6 498 -97 1904 164 6 3 chr20 18443927 18444238 -48223767 + AluJb SINE Alu 1 312 0 802 306 84 51 chr20 18444238 18444340 -48223665 + MLT1G1 LTR MaLR 498 595 0 571 331 102 16 chr20 18444365 18444679 -48223326 - L3 LINE CR1 -34 1543 1203 21 0 0 0 chr20 18445360 18445381 -48222624 + AT_rich Low_complexity Low_complexity 1 21 0 2978 70 0 3 chr20 18445421 18445778 -48222227 - L1PA8 LINE L1 -11 6161 5806 391 261 50 36 chr20 18446148 18446299 -48221706 - MIR3 SINE MIR -18 190 39 473 186 35 62 chr20 18446349 18446462 -48221543 - MER63 DNA MER1_type -100 736 1 760 294 128 69 chr20 18446579 18446798 -48221207 + L2 LINE L2 2262 2466 -848 1925 216 73 9 chr20 18446798 18447237 -48220768 + MLT1C LTR MaLR 1 467 0 760 294 128 69 chr20 18447237 18447687 -48220318 + L2 LINE L2 2466 2971 -343 1133 276 33 31 chr20 18447764 18448274 -48219731 + MLT1H1 LTR MaLR 22 590 0 410 333 0 0 chr20 18448338 18448434 -48219571 + L2 LINE L2 3160 3255 -17 2162 113 13 16 chr20 18449585 18449895 -48218110 - AluSx SINE Alu -3 309 1 873 249 97 56 chr20 18449927 18450026 -48217979 - MLT1I LTR MaLR 0 409 315 441 0 0 0 chr20 18450026 18450075 -48217930 + (TG)n Simple_repeat Simple_repeat 2 50 0 873 249 97 56 chr20 18450075 18450368 -48217637 - MLT1I LTR MaLR -94 315 1 1520 173 0 116 chr20 18450634 18450987 -48217018 - AluJo SINE Alu 0 312 1 2314 107 7 0 chr20 18450996 18451304 -48216701 - AluSg SINE Alu 0 310 1 360 203 14 0 chr20 18451343 18451412 -48216593 + MER5A DNA MER1_type 9 78 -111 817 209 0 0 chr20 18453500 18453629 -48214376 - FLAM_C SINE Alu -4 129 1 296 336 64 0 chr20 18453748 18453858 -48214147 - L2 LINE L2 -2 3311 3195 623 203 39 13 chr20 18453977 18454130 -48213875 - MIR SINE MIR -6 256 100 274 233 17 0 chr20 18455792 18455852 -48212153 + MIR SINE MIR 50 110 -152 543 257 101 22 chr20 18455913 18456092 -48211913 - MIR SINE MIR -68 194 2 543 289 80 8 chr20 18456321 18456560 -48211445 + MER113 DNA MER1_type? 164 419 -102 25 0 0 0 chr20 18456978 18457003 -48211002 + AT_rich Low_complexity Low_complexity 1 25 0 320 323 139 13 chr20 18457783 18457941 -48210064 - L2 LINE L2 -568 2746 2569 222 345 23 0 chr20 18458039 18458126 -48209879 + MIR3 SINE MIR 7 95 -113 522 270 122 25 chr20 18458175 18458371 -48209634 - MER58C DNA MER1_type 0 215 1 250 271 95 47 chr20 18458372 18458483 -48209522 - MIR SINE MIR -54 154 38 587 186 17 34 chr20 18458515 18458633 -48209372 - MER58B DNA MER1_type -4 337 222 952 229 85 0 chr20 18459537 18459738 -48208267 - MER20 DNA MER1_type -1 218 1 395 282 19 0 chr20 18460464 18460567 -48207438 + MER5A DNA MER1_type 1 105 -84 1392 210 138 13 chr20 18460996 18461381 -48206624 + L1ME1 LINE L1 5693 6125 -41 2449 81 0 10 chr20 18462704 18463013 -48204992 + AluY SINE Alu 1 306 -5 2210 102 0 16 chr20 18463110 18463413 -48204592 + AluSq SINE Alu 6 303 -10 596 171 193 11 chr20 18466968 18467149 -48200856 - HsTC2 DNA Tc2 -105 1793 1580 317 217 96 52 chr20 18467209 18467324 -48200681 - MER5C DNA MER1_type -200 124 5 213 276 35 0 chr20 18467390 18467448 -48200557 - L2 LINE L2 -509 2805 2746 924 228 58 17 chr20 18467456 18467697 -48200308 - L1ME1 LINE L1 -1 6165 5915 344 231 121 0 chr20 18467723 18467814 -48200191 - L1ME1 LINE L1 -406 5760 5659 816 227 273 27 chr20 18467838 18468063 -48199942 - L1MC4 LINE L1 -4 8038 7870 1413 201 58 0 chr20 18468063 18468337 -48199668 + AluJb SINE Alu 1 290 -22 816 227 273 27 chr20 18468337 18468485 -48199520 - L1MC4 LINE L1 -172 7870 7573 331 242 121 55 chr20 18468507 18468672 -48199333 - L1MC4 LINE L1 -1402 6640 6465 714 204 45 57 chr20 18468866 18469042 -48198963 + MER5B DNA MER1_type 2 175 -3 1457 161 74 97 chr20 18469158 18469549 -48198456 - MER66A LTR ERV1 0 478 97 363 274 233 7 chr20 18469852 18469998 -48198007 - MER5A DNA MER1_type 0 189 11 312 27 0 0 chr20 18470112 18470149 -48197856 + (CA)n Simple_repeat Simple_repeat 1 37 0 560 323 162 28 chr20 18470179 18470648 -48197357 - L2 LINE L2 -3 3310 2782 2214 121 0 0 chr20 18471552 18471857 -48196148 + AluSx SINE Alu 1 305 -7 199 227 45 0 chr20 18471891 18471935 -48196070 + MIR SINE MIR 113 158 -104 330 151 0 0 chr20 18471983 18472056 -48195949 + (CA)n Simple_repeat Simple_repeat 1 73 0 453 268 71 24 chr20 18472414 18472541 -48195464 + L2 LINE L2 3180 3312 -1 1079 111 132 0 chr20 18475214 18475353 -48192652 - L1MA9 LINE L1 0 6312 6140 234 0 0 0 chr20 18475353 18475379 -48192626 + (TG)n Simple_repeat Simple_repeat 1 26 0 1079 111 132 0 chr20 18475379 18475429 -48192576 - L1MA9 LINE L1 -172 6140 6098 339 227 173 53 chr20 18477796 18477946 -48190059 + MER5A DNA MER1_type 22 189 0 2339 151 3 0 chr20 18479029 18479384 -48188621 + LTR45 LTR ERV1 1 356 -169 2166 166 36 34 chr20 18479384 18479933 -48188072 + MLT2A2 LTR ERVL 1 554 0 9360 186 6 11 chr20 18479934 18481589 -48186416 - MSTB-int LTR MaLR -5 1646 1 2819 150 7 9 chr20 18481589 18482016 -48185989 - MSTB LTR MaLR 0 426 1 295 77 0 0 chr20 18482052 18482091 -48185914 + MSTB LTR MaLR 1 39 -387 2476 118 18 54 chr20 18482370 18482759 -48185246 - THE1C LTR MaLR 0 375 1 273 313 66 56 chr20 18483001 18483199 -48184806 + MIR SINE MIR 56 255 -7 541 290 29 58 chr20 18485741 18486017 -48181988 - LTR16A1 LTR ERVL 0 457 190 932 171 55 6 chr20 18487042 18487223 -48180782 + MER20 DNA MER1_type 29 218 -1 1366 266 22 25 chr20 18488838 18489241 -48178764 + LTR16C LTR ERVL 89 490 -1 2415 183 21 7 chr20 18489407 18489833 -48178172 + MSTB1 LTR MaLR 1 432 0 634 234 226 69 chr20 18492379 18492840 -48175165 + MLT1G1 LTR MaLR 1 589 -6 379 228 18 44 chr20 18493141 18493255 -48174750 + MLT1J LTR MaLR 3 113 -398 994 322 10 3 chr20 18493420 18493718 -48174287 + LTR16C LTR ERVL 192 491 0 727 253 46 76 chr20 18493863 18494100 -48173905 + MIR SINE MIR 7 236 -26 1869 151 78 71 chr20 18494100 18494524 -48173481 - MSTB1 LTR MaLR -5 427 1 420 312 111 5 chr20 18495449 18495638 -48172367 - MIR SINE MIR -48 214 6 4256 192 54 18 chr20 18495811 18497216 -48170789 - L1MB7 LINE L1 -22 6162 4682 2136 135 0 0 chr20 18497216 18497520 -48170485 - AluY SINE Alu -7 304 1 4256 192 54 18 chr20 18497520 18497942 -48170063 - L1MB7 LINE L1 -1502 4682 4276 2470 191 17 7 chr20 18497943 18498361 -48169644 + MSTB LTR MaLR 5 426 0 5554 201 10 66 chr20 18498361 18499347 -48168658 + MSTB-int LTR MaLR 1 1040 -540 1819 170 6 26 chr20 18499347 18499658 -48168347 + AluSx SINE Alu 1 305 -7 5554 201 10 66 chr20 18499658 18499735 -48168270 + MSTB-int LTR MaLR 1040 1120 -460 1023 82 11 28 chr20 18499735 18499917 -48168088 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 5554 201 10 66 chr20 18499917 18500619 -48167386 + MSTB-int LTR MaLR 1120 1580 0 2610 166 39 5 chr20 18500620 18501031 -48166974 + MSTB LTR MaLR 2 426 0 1511 190 12 39 chr20 18501032 18501364 -48166641 - L1MB7 LINE L1 -1866 4280 3958 1098 303 74 31 chr20 18501431 18502043 -48165962 + L2 LINE L2 2671 3310 -3 988 208 6 0 chr20 18502050 18502223 -48165782 + MER63A DNA MER1_type 1 174 -36 401 329 26 0 chr20 18502247 18502402 -48165603 + MER117 DNA MER1_type 1 159 -38 240 269 77 26 chr20 18503308 18503386 -48164619 - L2 LINE L2 -6 3266 3185 1253 237 32 0 chr20 18503393 18503731 -48164274 - LTR37A LTR ERV1 0 426 78 950 259 100 75 chr20 18503848 18504174 -48163831 - L2 LINE L2 -1283 2031 1686 8183 26 0 2 chr20 18504174 18505405 -48162600 - L1PA5 LINE L1 -5 6149 4921 950 259 100 75 chr20 18505405 18505588 -48162417 - L2 LINE L2 -1628 1686 1509 963 224 5 10 chr20 18505753 18505958 -48162047 - MER3 DNA MER1_type 0 209 6 22 0 0 0 chr20 18506528 18506550 -48161455 + AT_rich Low_complexity Low_complexity 1 22 0 2348 159 3 3 chr20 18506616 18506988 -48161017 - L1PA15 LINE L1 -333 6548 6177 * 9341 230 26 57 chr20 18506976 18506988 -48161017 - L1PA15 LINE L1 -1973 4889 4878 1938 138 0 0 chr20 18506988 18507263 -48160742 + AluSx SINE Alu 1 275 -37 9341 230 26 57 chr20 18507263 18510837 -48157168 - L1PA15 LINE L1 -1984 4878 1418 278 278 40 20 chr20 18511364 18511515 -48156490 + HAL1b LINE L1 746 899 -449 21 71 0 0 chr20 18511610 18511652 -48156353 + AT_rich Low_complexity Low_complexity 1 42 0 33 35 0 17 chr20 18511743 18511768 -48156237 + AT_rich Low_complexity Low_complexity 1 25 -32 1916 155 3 0 chr20 18511768 18512052 -48155953 - AluSx SINE Alu -27 285 1 33 35 0 17 chr20 18512052 18512084 -48155921 + AT_rich Low_complexity Low_complexity 25 57 0 560 29 0 0 chr20 18512084 18512153 -48155852 - L1MA2 LINE L1 0 6304 6236 21 36 0 0 chr20 18512166 18512194 -48155811 + AT_rich Low_complexity Low_complexity 1 28 0 4417 92 3 2 chr20 18512194 18512772 -48155233 - L1PB1 LINE L1 -1 6150 5572 40727 78 4 4 chr20 18512789 18518936 -48149069 - L1PA6 LINE L1 0 6154 2 3542 220 68 3 chr20 18518939 18519879 -48148126 - L1PA15 LINE L1 -5857 1006 6 500 128 0 0 chr20 18519894 18519972 -48148033 - AluSg/x SINE Alu -13 296 219 293 298 121 44 chr20 18519975 18520223 -48147782 + L1MEd LINE L1 94 360 -5759 321 319 17 35 chr20 18520264 18520380 -48147625 + L1MEd LINE L1 934 1047 -5072 878 186 0 53 chr20 18520630 18520818 -48147187 - Tigger2a DNA MER2_type -256 178 1 522 239 35 0 chr20 18521658 18521800 -48146205 - L1MA10 LINE L1 -4 6330 6184 30 0 0 0 chr20 18521846 18521876 -48146129 + AT_rich Low_complexity Low_complexity 1 30 0 5975 103 44 0 chr20 18521976 18523051 -48144954 - L1PA12 LINE L1 -13 6155 5050 3155 153 6 30 chr20 18523051 18523685 -48144320 + L1P LINE L1 4238 4856 -1290 3626 224 78 16 chr20 18525568 18526022 -48141983 + Charlie1 DNA MER1_type 1580 2004 -757 2363 45 24 0 chr20 18526022 18526186 -48141819 - AluY SINE Alu -16 295 120 459 0 0 0 chr20 18526186 18526237 -48141768 + (TG)n Simple_repeat Simple_repeat 2 52 0 2363 45 24 0 chr20 18526237 18526360 -48141645 - AluY SINE Alu -191 120 1 3626 224 78 16 chr20 18526360 18527018 -48140987 + Charlie1 DNA MER1_type 2004 2761 0 23 0 0 0 chr20 18527638 18527661 -48140344 + AT_rich Low_complexity Low_complexity 1 23 0 569 262 20 7 chr20 18528906 18529055 -48138950 + MER5B DNA MER1_type 26 176 -2 1819 162 7 0 chr20 18529219 18529503 -48138502 + AluJo SINE Alu 1 286 -26 211 165 72 10 chr20 18529503 18529600 -48138405 + (TA)n Simple_repeat Simple_repeat 2 104 0 240 324 0 0 chr20 18530209 18530283 -48137722 + L2 LINE L2 3193 3266 -6 826 204 80 4 chr20 18530575 18530800 -48137205 - Charlie4 DNA MER1_type -1702 259 18 333 140 0 0 chr20 18530901 18530958 -48137047 + (TTCC)n Simple_repeat Simple_repeat 4 60 0 784 195 81 0 chr20 18531049 18531223 -48136782 - MER5A DNA MER1_type 0 189 2 2728 164 68 51 chr20 18531469 18531651 -48136354 + LTR26 LTR ERV1 1 178 -425 1965 75 12 0 chr20 18531651 18531906 -48136099 + AluY SINE Alu 2 259 -52 2728 164 68 51 chr20 18531906 18532316 -48135689 + LTR26 LTR ERV1 178 603 0 373 281 16 36 chr20 18532506 18532698 -48135307 + LTR16C LTR ERVL 302 489 -2 357 315 59 35 chr20 18532700 18532903 -48135102 + MIR SINE MIR 49 256 -6 390 21 0 0 chr20 18536653 18536700 -48131305 + (TG)n Simple_repeat Simple_repeat 2 48 0 1915 136 50 39 chr20 18536711 18537071 -48130934 + THE1B LTR MaLR 1 364 0 238 336 25 33 chr20 18537220 18537342 -48130663 + L3 LINE CR1 1269 1389 -188 290 394 46 17 chr20 18537592 18537767 -48130238 + L3 LINE CR1 1393 1572 -5 369 288 88 40 chr20 18539264 18539514 -48128491 - L1ME4a LINE L1 -175 5946 5685 184 323 43 65 chr20 18540637 18540730 -48127275 - L2 LINE L2 -1 3312 3222 331 260 40 14 chr20 18540734 18540827 -48127178 + MIR SINE MIR 20 115 -93 4058 120 35 60 chr20 18541262 18542056 -48125949 - LTR1 LTR ERV1 0 785 12 463 313 27 0 chr20 18543390 18543537 -48124468 - L2 LINE L2 -1022 2292 2142 287 299 131 7 chr20 18544141 18544278 -48123727 + MIR SINE MIR 1 154 -108 1623 239 44 89 chr20 18545022 18545595 -48122410 - MLT1H1 LTR MaLR -2 553 7 294 232 0 91 chr20 18546037 18546136 -48121869 - MIR SINE MIR -102 106 17 12530 204 40 14 chr20 18546397 18551081 -48116924 + L1PA15-16 LINE L1 1222 6042 -807 279 130 136 0 chr20 18551090 18551156 -48116849 + L1PA16 LINE L1 5293 5367 -788 * 3820 100 0 7 chr20 18551149 18551727 -48116278 - L1P LINE L1 -1233 4913 4340 1480 98 4 27 chr20 18551727 18551949 -48116056 + L1PA8 LINE L1 5952 6171 -1 4487 119 59 7 chr20 18551970 18552737 -48115268 + L1PA16 LINE L1 5360 6166 0 2807 208 21 82 chr20 18552802 18553736 -48114269 - MER97a DNA MER1_type? 0 894 18 486 271 117 76 chr20 18554362 18554678 -48113327 + L2 LINE L2 2352 2700 -614 1519 203 0 32 chr20 18554678 18554989 -48113016 + AluJo SINE Alu 1 301 -11 486 271 117 76 chr20 18554989 18555200 -48112805 + L2 LINE L2 2700 2901 -413 588 206 64 7 chr20 18555228 18555369 -48112636 + L2 LINE L2 3165 3313 0 23 0 0 0 chr20 18555944 18555967 -48112038 + AT_rich Low_complexity Low_complexity 1 23 0 271 346 20 40 chr20 18557130 18557231 -48110774 + MIR SINE MIR 12 110 -152 237 253 0 40 chr20 18557450 18557525 -48110480 + L3 LINE CR1 577 648 -929 * 1669 253 90 30 chr20 18557466 18558031 -48109974 + L2 LINE L2 2107 2705 -609 1637 197 39 20 chr20 18558038 18558733 -48109272 - L1MC/D LINE L1 -743 5403 4977 * 1760 228 57 4 chr20 18558717 18559173 -48108832 + L1ME1 LINE L1 5685 6164 -2 556 157 0 100 chr20 18559178 18559318 -48108687 - L1MC1 LINE L1 -132 6201 6076 723 181 65 0 chr20 18559320 18559475 -48108530 + L1MC1 LINE L1 6169 6333 0 753 268 59 16 chr20 18559560 18559814 -48108191 + MER119 DNA MER1_type 68 332 -251 2764 143 17 38 chr20 18559819 18560010 -48107995 - LTR24 LTR ERV1 0 467 274 2295 122 0 0 chr20 18560010 18560321 -48107684 - AluSx SINE Alu -1 311 1 2764 143 17 38 chr20 18560321 18560606 -48107399 - LTR24 LTR ERV1 -193 274 1 2189 112 0 3 chr20 18560623 18560936 -48107069 - L1PB1 LINE L1 -3 6148 5837 2160 210 0 0 chr20 18560938 18561433 -48106572 + L1 LINE L1 4143 4637 -1509 430 235 9 0 chr20 18561434 18561549 -48106456 - LTR24-int LTR ERV1 0 5123 5008 1898 160 0 26 chr20 18562914 18563227 -48104778 - AluJb SINE Alu -7 305 1 810 128 0 0 chr20 18563552 18563677 -48104328 - L1PB1 LINE L1 -190 5961 5837 674 187 0 0 chr20 18563674 18563808 -48104197 + L1 LINE L1 4138 4271 -1875 * 260 305 8 30 chr20 18566516 18566647 -48101358 - LTR24-int LTR ERV1 -4324 3432 3305 715 186 40 0 chr20 18566783 18566907 -48101098 - FLAM_C SINE Alu -12 131 3 946 97 8 0 chr20 18567925 18568059 -48099946 + MER85 DNA T2_type 1 135 -4 207 0 0 0 chr20 18568329 18568352 -48099653 + (CAA)n Simple_repeat Simple_repeat 2 24 0 5000 130 19 1 chr20 18568353 18569175 -48098830 + L1PA16 LINE L1 5312 6148 -18 1873 183 6 3 chr20 18569451 18569762 -48098243 - AluJb SINE Alu 0 312 1 24 0 0 0 chr20 18569854 18569878 -48098127 + AT_rich Low_complexity Low_complexity 1 24 0 301 241 0 35 chr20 18570061 18570148 -48097857 - LTR24-int LTR ERV1 -4378 745 662 1465 207 47 41 chr20 18570464 18570960 -48097045 - LTR24-int LTR ERV1 -4472 651 17 2792 141 31 2 chr20 18570976 18571430 -48096575 - LTR24 LTR ERV1 0 467 1 273 284 0 12 chr20 18571539 18571620 -48096385 - LTR67 LTR ERVL -477 80 1 324 246 82 37 chr20 18571636 18571770 -48096235 + MIR SINE MIR 105 244 -18 2317 114 3 0 chr20 18572371 18572677 -48095328 - AluSq SINE Alu -6 307 1 734 310 112 17 chr20 18573680 18574218 -48093787 - L1MC4a LINE L1 -1907 5901 5313 1704 170 7 29 chr20 18574321 18574627 -48093378 - AluJo SINE Alu -13 299 1 28 111 0 0 chr20 18575160 18575286 -48092719 + AT_rich Low_complexity Low_complexity 1 126 0 801 301 89 31 chr20 18575544 18576125 -48091880 - L1MC4a LINE L1 -1807 4339 3725 463 298 94 57 chr20 18576142 18576682 -48091323 - L1MC4a LINE L1 -2503 3643 3084 279 0 0 0 chr20 18576696 18576727 -48091278 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 13797 200 24 7 chr20 18576727 18577096 -48090909 - L1PB1 LINE L1 -11 6856 6495 294 95 0 0 chr20 18577096 18577138 -48090867 + (CA)n Simple_repeat Simple_repeat 2 43 0 13797 200 24 7 chr20 18577138 18580758 -48087247 - L1PB1 LINE L1 -372 6495 2692 288 0 0 0 chr20 18580758 18580790 -48087215 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 13797 200 24 7 chr20 18580790 18581625 -48086380 - L1PB1 LINE L1 -4175 2692 1872 367 248 8 16 chr20 18581614 18581735 -48086270 - L1ME LINE L1 -297 5824 5705 * 2742 10 0 0 chr20 18581769 18582067 -48085938 - AluYa5 SINE Alu -13 298 1 391 294 25 109 chr20 18582873 18583074 -48084931 - MLT1K LTR MaLR -317 271 88 422 313 37 33 chr20 18583545 18583759 -48084246 + LTR16C LTR ERVL 275 489 -2 295 350 43 0 chr20 18584060 18584177 -48083828 - L2 LINE L2 -10 3303 3182 300 281 0 10 chr20 18584397 18584493 -48083512 + L1MC4 LINE L1 7427 7521 -521 268 263 0 0 chr20 18584495 18584509 -48083496 + MER3 DNA MER1_type 34 47 -162 423 132 132 0 chr20 18584509 18584585 -48083420 - MER3 DNA MER1_type 0 209 124 1061 187 31 8 chr20 18584585 18584842 -48083163 + L1MA7 LINE L1 6017 6279 -12 29 28 0 0 chr20 18584849 18584885 -48083120 + AT_rich Low_complexity Low_complexity 1 36 0 609 217 0 0 chr20 18584885 18585000 -48083005 + FLAM_C SINE Alu 3 117 -26 312 27 0 0 chr20 18585000 18585037 -48082968 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 569 240 40 0 chr20 18585037 18585162 -48082843 - MER3 DNA MER1_type -79 130 1 1118 213 166 0 chr20 18585182 18585459 -48082546 + L1MC4a LINE L1 7481 7803 -5 25 31 0 0 chr20 18585505 18585537 -48082468 + AT_rich Low_complexity Low_complexity 1 32 0 916 334 28 26 chr20 18585597 18586019 -48081986 + HERV16 LTR ERVL 61 483 -4513 1370 297 86 17 chr20 18586052 18586632 -48081373 + HERVL LTR ERVL 2711 3330 -2324 440 210 10 10 chr20 18586922 18587022 -48080983 + HERVL LTR ERVL 3764 3863 -1901 598 324 69 43 chr20 18587387 18587957 -48080048 + HERVL LTR ERVL 4525 5140 -624 3762 167 30 6 chr20 18587957 18588620 -48079385 - LTR58 LTR ERV1 0 679 1 598 324 69 43 chr20 18588620 18588817 -48079188 + HERVL LTR ERVL 5140 5330 -434 482 250 33 20 chr20 18588902 18589054 -48078951 + LTR16A LTR ERVL 196 349 -101 1429 221 206 17 chr20 18589057 18589532 -48078473 + MLT1F1 LTR MaLR 3 567 0 286 309 21 0 chr20 18589532 18589626 -48078379 + LTR16A LTR ERVL 349 444 -6 462 254 8 8 chr20 18589965 18590087 -48077918 + MIR SINE MIR 136 257 -5 795 256 141 34 chr20 18591168 18591709 -48076296 - L1MC4a LINE L1 -299 5822 5255 4714 194 9 21 chr20 18591867 18592985 -48075020 + L1MA3 LINE L1 3527 4630 -2935 6948 133 27 15 chr20 18593004 18595112 -48072893 + L1MA3 LINE L1 5586 7724 0 2639 166 44 69 chr20 18595429 18595995 -48072010 - MLT2B3 LTR ERVL -2 552 1 216 0 0 0 chr20 18596211 18596235 -48071770 + (TTTTA)n Simple_repeat Simple_repeat 3 26 0 7514 106 13 4 chr20 18596236 18598164 -48069841 - L1PA10 LINE L1 -20 6148 4204 2116 112 0 3 chr20 18598260 18598591 -48069414 - AluSp SINE Alu 0 330 1 225 148 0 98 chr20 18598797 18598858 -48069147 + L1ME2 LINE L1 5972 6026 -138 225 0 0 0 chr20 18598922 18598947 -48069058 + (TAAAA)n Simple_repeat Simple_repeat 3 27 0 203 231 0 0 chr20 18598996 18599035 -48068970 + (CA)n Simple_repeat Simple_repeat 2 40 0 289 237 0 17 chr20 18599035 18599094 -48068911 + Tigger5 DNA MER2_type 1 58 -2265 * 1762 131 25 0 chr20 18599078 18599360 -48068645 + Tigger5 DNA MER2_type 2035 2323 0 27 49 0 0 chr20 18599773 18599814 -48068191 + AT_rich Low_complexity Low_complexity 1 41 0 336 322 7 9 chr20 18599823 18599986 -48068019 + L1MC4a LINE L1 5670 5833 -297 2247 80 28 3 chr20 18600114 18600402 -48067603 - AluSg SINE Alu -15 295 1 1965 141 3 0 chr20 18600677 18600961 -48067044 - AluSx SINE Alu -25 287 3 2028 124 84 32 chr20 18601932 18602278 -48065727 + THE1B LTR MaLR 1 364 0 209 264 19 0 chr20 18602348 18602401 -48065604 + (CA)n Simple_repeat Simple_repeat 1 54 0 444 270 132 53 chr20 18602464 18602935 -48065070 - L1ME4a LINE L1 -4 6117 5610 201 161 0 0 chr20 18602984 18603015 -48064990 + L2 LINE L2 3227 3257 -15 238 291 23 12 chr20 18603015 18603101 -48064904 - L1ME4a LINE L1 -499 5622 5536 1641 122 4 35 chr20 18603155 18603409 -48064596 - AluSx SINE Alu -17 295 50 2018 123 6 35 chr20 18603416 18603734 -48064271 - THE1B LTR MaLR -55 309 1 320 216 163 64 chr20 18603741 18604023 -48063982 - L1ME4a LINE L1 -870 5276 4967 514 211 0 0 chr20 18604240 18604335 -48063670 - FLAM_A SINE Alu -13 129 35 264 314 94 31 chr20 18604434 18604625 -48063380 + MIR SINE MIR 58 260 -2 2059 150 26 58 chr20 18604690 18605117 -48062888 - MLT2D LTR ERVL -1 413 1 11591 209 46 17 chr20 18606029 18609837 -48058168 - L1 LINE L1 -1133 5715 1776 1268 183 0 0 chr20 18609837 18610039 -48057966 + AluJb SINE Alu 87 288 -24 27 29 0 0 chr20 18610039 18610073 -48057932 + AT_rich Low_complexity Low_complexity 1 34 0 4421 259 72 66 chr20 18610095 18610310 -48057695 - L1 LINE L1 -5060 1789 1577 1870 160 0 36 chr20 18610310 18610617 -48057388 - AluSx SINE Alu -16 296 1 4421 259 72 66 chr20 18610617 18612169 -48055836 - L1 LINE L1 -5272 1577 10 3907 187 96 70 chr20 18612173 18612218 -48055787 - L1MDa LINE L1 -4137 2403 2361 207 0 0 0 chr20 18612218 18612241 -48055764 + (TA)n Simple_repeat Simple_repeat 2 24 0 3907 187 96 70 chr20 18612241 18612685 -48055320 - L1MDa LINE L1 -4179 2361 1930 2128 97 7 10 chr20 18612685 18612973 -48055032 - AluSq SINE Alu -26 287 1 3907 187 96 70 chr20 18612973 18613749 -48054256 - L1MDa LINE L1 -4610 1930 1104 451 291 33 22 chr20 18613857 18614039 -48053966 + LTR16C LTR ERVL 287 470 -21 1015 165 0 96 chr20 18614353 18614583 -48053422 + L1PA13 LINE L1 3 210 -7371 * 22544 168 13 6 chr20 18614572 18619054 -48048951 + L1PA13 LINE L1 2409 6930 -671 2258 115 0 0 chr20 18619054 18619358 -48048647 + AluSx SINE Alu 3 306 -6 22544 168 13 6 chr20 18619358 18620030 -48047975 + L1PA13 LINE L1 6930 7596 -5 2504 193 47 33 chr20 18621539 18622119 -48045886 + MER92B LTR ERV1 46 633 -3 638 183 43 55 chr20 18622818 18622982 -48045023 + MER5A DNA MER1_type 14 175 -14 218 298 21 21 chr20 18623179 18623273 -48044732 - MIR SINE MIR -6 256 163 205 322 215 0 chr20 18624340 18624461 -48043544 - MIR3 SINE MIR -31 177 31 441 289 19 38 chr20 18624484 18624643 -48043362 - MER5A DNA MER1_type -22 167 12 1792 149 3 17 chr20 18625018 18625307 -48042698 + AluJb SINE Alu 1 285 -27 215 30 0 30 chr20 18625307 18625340 -48042665 + (TTTAA)n Simple_repeat Simple_repeat 1 32 0 1014 152 0 0 chr20 18625340 18625491 -48042514 + FRAM SINE Alu 1 144 -32 339 226 0 43 chr20 18625917 18626010 -48041995 + MLT1K LTR MaLR 177 265 -323 346 245 20 88 chr20 18626058 18626205 -48041800 - L2 LINE L2 -25 3288 3152 521 235 0 0 chr20 18626290 18626405 -48041600 - MIR SINE MIR -10 252 138 512 299 133 17 chr20 18627254 18627488 -48040517 + MIR SINE MIR 2 262 0 1509 182 3 47 chr20 18627594 18627919 -48040086 + AluJo SINE Alu 1 312 0 309 272 0 68 chr20 18628128 18628148 -48039857 - L1MC4 LINE L1 -1333 6709 6689 2156 80 22 0 chr20 18628148 18628444 -48039561 + AluY SINE Alu 1 302 0 309 272 0 68 chr20 18628444 18628525 -48039480 - L1MC4 LINE L1 -1353 6689 6614 * 314 326 0 0 chr20 18628451 18628540 -48039465 + L1MC4 LINE L1 6614 6702 -1340 259 328 75 22 chr20 18629231 18629365 -48038640 + MIR SINE MIR 94 234 -28 642 174 10 0 chr20 18630222 18630320 -48037685 + AluJo SINE Alu 21 119 -193 1166 142 0 0 chr20 18630331 18630500 -48037505 - AluSg/x SINE Alu -18 292 124 890 179 0 0 chr20 18630519 18630664 -48037341 + AluJo SINE Alu 129 273 -39 219 36 0 0 chr20 18630669 18630697 -48037308 + (TC)n Simple_repeat Simple_repeat 2 29 0 * 435 38 0 0 chr20 18630696 18630749 -48037256 + (TG)n Simple_repeat Simple_repeat 2 54 0 326 270 96 34 chr20 18631267 18631445 -48036560 + MIR SINE MIR 74 262 0 893 270 201 12 chr20 18631765 18632263 -48035742 + L2 LINE L2 2715 3313 0 23 0 0 0 chr20 18632364 18632387 -48035618 + AT_rich Low_complexity Low_complexity 1 23 0 42568 63 3 1 chr20 18632387 18638527 -48029478 - L1PA5 LINE L1 -2 6152 1 493 256 33 11 chr20 18639019 18639199 -48028806 - L1MEc LINE L1 -3965 2756 2573 1587 250 56 7 chr20 18639204 18639616 -48028389 + MER70A LTR ERVL 4 435 -37 281 105 0 0 chr20 18639642 18639680 -48028325 - L1MEc LINE L1 -4001 2539 2502 3541 182 74 100 chr20 18639834 18641099 -48026906 + MER52C LTR ERV1 76 1278 0 996 239 27 0 chr20 18641231 18641453 -48026552 - MSTB LTR MaLR -197 229 2 2246 264 84 30 chr20 18641477 18642253 -48025752 - L1MEc LINE L1 -5524 1019 202 366 270 75 13 chr20 18642253 18642412 -48025593 - L1M4 LINE L1 -2905 3477 3309 235 280 15 2 chr20 18642565 18642660 -48025345 - HAL1 LINE L1 -902 1841 1541 737 217 121 13 chr20 18642708 18642938 -48025067 + MLT1G3 LTR MaLR 151 436 -106 340 285 219 0 chr20 18642963 18643086 -48024919 + MIR SINE MIR 49 198 -64 * 358 309 42 42 chr20 18643080 18643248 -48024757 - MIR SINE MIR -84 178 11 494 266 145 5 chr20 18644066 18644273 -48023732 - MIR SINE MIR -26 236 1 329 217 24 0 chr20 18644346 18644429 -48023576 + MER113 DNA MER1_type? 366 450 -71 211 345 44 9 chr20 18644664 18644777 -48023228 + MIR3 SINE MIR 65 181 -27 2233 151 30 21 chr20 18644869 18645241 -48022764 + THE1C LTR MaLR 1 375 0 916 243 146 27 chr20 18645282 18645686 -48022319 - MER113 DNA MER1_type? 0 521 70 554 282 45 0 chr20 18645697 18645853 -48022152 - MLT1H LTR MaLR -5 544 382 * 1452 260 71 4 chr20 18645817 18646267 -48021738 - Charlie4a DNA MER1_type -7 501 22 314 249 99 86 chr20 18647510 18647892 -48020113 - L1ME4a LINE L1 -3 6118 5732 302 262 110 67 chr20 18649091 18649255 -48018750 - MIR SINE MIR -4 258 88 1966 150 7 7 chr20 18650392 18650692 -48017313 - AluJo SINE Alu -12 300 1 222 342 221 0 chr20 18651259 18651408 -48016597 - MIR SINE MIR -23 239 58 757 210 5 6 chr20 18651414 18651569 -48016436 + MLT1B LTR MaLR 1 139 -251 * 891 191 62 15 chr20 18651555 18651854 -48016151 + LOR1a LTR ERV1 126 497 0 1457 179 12 0 chr20 18651854 18652105 -48015900 + MLT1B LTR MaLR 137 390 0 1306 208 96 16 chr20 18652135 18652448 -48015557 - MLT1F LTR MaLR 0 542 205 560 250 40 45 chr20 18652683 18652859 -48015146 + MIR SINE MIR 31 205 -57 728 121 0 16 chr20 18652905 18653029 -48014976 + (TTCC)n Simple_repeat Simple_repeat 3 124 0 1205 163 51 99 chr20 18653471 18653765 -48014240 - AluJo SINE Alu -12 300 21 1943 123 54 92 chr20 18653803 18654193 -48013812 + THE1C LTR MaLR 1 375 0 1298 286 51 15 chr20 18654298 18654690 -48013315 - LTR16C LTR ERVL -1 490 85 6430 142 13 10 chr20 18655307 18661570 -48006435 + L1PA8A LINE L1 2 6445 -1 309 301 107 11 chr20 18661743 18661836 -48006169 - L1MC4 LINE L1 -18 8024 7941 2268 123 0 0 chr20 18661836 18662146 -48005859 - AluY SINE Alu 0 311 2 309 301 107 11 chr20 18662146 18662314 -48005691 - L1MC4 LINE L1 -101 7941 7738 1192 229 104 48 chr20 18662376 18662751 -48005254 - MSTD LTR MaLR 0 396 1 404 282 43 69 chr20 18662796 18663197 -48004808 - L1MC5 LINE L1 -452 7509 7246 977 221 43 29 chr20 18663352 18663560 -48004445 + MER58A DNA MER1_type 6 216 -8 592 237 20 7 chr20 18663671 18663687 -48004318 - L1MA10 LINE L1 -2 6332 6317 1015 262 28 16 chr20 18663687 18664004 -48004001 - L1ME2 LINE L1 -9 6155 5835 1551 157 27 37 chr20 18664009 18664303 -48003702 + MER49 LTR ERV1 4 294 -629 395 209 0 7 chr20 18664289 18664404 -48003601 + MER4E LTR ERV1 62 284 -588 * 565 184 0 9 chr20 18664402 18664511 -48003494 + MER4D LTR ERV1 547 654 -249 4034 162 21 13 chr20 18664517 18665234 -48002771 + MER50 LTR ERV1 12 734 0 965 240 53 20 chr20 18665234 18665479 -48002526 + MER4D LTR ERV1 651 903 0 2115 130 23 8 chr20 18665479 18665887 -48002118 + LTR49 LTR ERV1 23 659 -128 1110 206 59 47 chr20 18665880 18666220 -48001785 + LTR48B LTR ERV1 301 644 0 * 1203 195 18 5 chr20 18666226 18666500 -48001505 - L1ME2 LINE L1 -342 5822 5545 1909 212 24 19 chr20 18668165 18668590 -47999415 - L1MD3 LINE L1 0 7995 7569 1498 225 8 54 chr20 18668594 18668749 -47999256 + MLT1A1 LTR MaLR 1 162 -203 2411 95 0 0 chr20 18668749 18669053 -47998952 + AluSx SINE Alu 2 305 -7 1498 225 8 54 chr20 18669053 18669266 -47998739 + MLT1A1 LTR MaLR 162 352 -13 1118 243 57 25 chr20 18669275 18669629 -47998376 - L1MC4a LINE L1 -411 7397 7033 245 262 149 48 chr20 18669801 18669969 -47998036 + L2 LINE L2 2913 3097 -175 2526 249 56 36 chr20 18670180 18671139 -47996866 - L1ME1 LINE L1 -5 6161 5187 30 59 0 0 chr20 18671576 18671627 -47996378 + AT_rich Low_complexity Low_complexity 1 51 0 187 162 27 27 chr20 18671827 18671864 -47996141 - L2 LINE L2 -26 3246 3210 2598 113 54 0 chr20 18673088 18673458 -47994547 + MLT1B LTR MaLR 1 390 0 259 254 216 50 chr20 18674059 18674240 -47993765 + MIR SINE MIR 46 256 -6 3239 218 35 5 chr20 18674766 18675400 -47992605 - MER82 DNA MER2_type 0 653 1 1938 214 91 32 chr20 18675925 18676416 -47991589 + MLT1A2-int LTR MaLR 679 1140 -595 2060 128 7 7 chr20 18676416 18676721 -47991284 + AluSc SINE Alu 1 305 -4 1938 214 91 32 chr20 18676721 18676771 -47991234 + MLT1A2-int LTR MaLR 1140 1735 0 1573 197 15 82 chr20 18676771 18677172 -47990833 + MLT1A2 LTR MaLR 1 374 0 246 186 0 34 chr20 18677374 18677433 -47990572 + (CATA)n Simple_repeat Simple_repeat 2 58 0 289 259 147 94 chr20 18677457 18677638 -47990367 + MIR SINE MIR 19 206 -56 1988 206 130 0 chr20 18678788 18679195 -47988810 - MER74C LTR ERVL 0 460 1 186 43 0 0 chr20 18679687 18679710 -47988295 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 299 305 156 13 chr20 18679846 18680000 -47988005 + MIR3 SINE MIR 30 205 -3 22 0 0 0 chr20 18680037 18680059 -47987946 + AT_rich Low_complexity Low_complexity 1 22 0 319 346 0 0 chr20 18680321 18680399 -47987606 + L3 LINE CR1 1412 1489 -88 458 291 17 41 chr20 18680434 18680606 -47987399 - MIR3 SINE MIR -27 181 14 635 186 16 24 chr20 18681410 18681534 -47986471 + L1PA16 LINE L1 6030 6152 -14 1401 206 84 12 chr20 18681903 18682222 -47985783 + MLT1A1 LTR MaLR 23 428 0 3403 104 20 0 chr20 18682375 18682816 -47985189 + MLT2A2 LTR ERVL 1 450 -3 428 309 97 31 chr20 18683107 18683366 -47984639 - L2 LINE L2 -43 3270 2995 2735 235 86 24 chr20 18683533 18683857 -47984148 + L1ME2 LINE L1 4106 4409 -1737 8996 170 45 25 chr20 18683857 18685162 -47982843 + L1PA13 LINE L1 3765 5042 -1121 2128 148 72 17 chr20 18685162 18685507 -47982498 - THE1B LTR MaLR 0 364 1 12475 96 4 1 chr20 18685507 18687083 -47980922 - THE1B-int LTR MaLR 0 1580 1 2129 154 73 14 chr20 18687083 18687427 -47980578 - THE1B LTR MaLR 0 364 1 8996 170 45 25 chr20 18687427 18688503 -47979502 + L1PA13 LINE L1 5041 6159 -4 2735 235 86 24 chr20 18688503 18689230 -47978775 + L1ME2 LINE L1 4409 5222 -924 2984 233 52 17 chr20 18689248 18690078 -47977927 + L1ME2 LINE L1 5274 6132 -32 3247 191 24 88 chr20 18690254 18691086 -47976919 + MER4E LTR ERV1 1 779 0 263 295 0 0 chr20 18691710 18691805 -47976200 + T-rich Low_complexity Low_complexity 1 95 0 1433 275 67 53 chr20 18692789 18693353 -47974652 - MER50 LTR ERV1 -160 574 3 314 324 36 46 chr20 18693756 18693976 -47974029 + MIR SINE MIR 4 220 -42 1590 230 52 5 chr20 18694317 18694700 -47973305 - MLT1C LTR MaLR -54 413 13 264 215 31 0 chr20 18694721 18694786 -47973219 - MER94 DNA DNA -64 70 4 1907 144 10 0 chr20 18695183 18695474 -47972531 - AluSx SINE Alu -18 294 1 431 141 22 43 chr20 18698619 18698711 -47969294 - Charlie5 DNA MER1_type -10 2602 2513 2897 79 3 3 chr20 18698714 18699083 -47968922 - L1PA13 LINE L1 -11 6152 5784 6135 195 56 71 chr20 18699323 18701076 -47966929 + MER52A LTR ERV1 29 1755 0 2959 87 5 24 chr20 18701076 18701501 -47966504 - L1P4 LINE L1 -374 5789 5373 501 292 88 22 chr20 18701543 18701769 -47966236 - MLT1H LTR MaLR -200 349 109 3058 191 54 7 chr20 18701798 18702374 -47965631 - MER21B LTR ERV1 -246 617 15 192 152 0 0 chr20 18702374 18702407 -47965598 + (TATATG)n Simple_repeat Simple_repeat 5 37 0 235 224 20 0 chr20 18702562 18702611 -47965394 + LTR16C LTR ERVL 442 491 0 943 297 146 11 chr20 18703297 18703755 -47964250 + MLT1H LTR MaLR 12 531 -18 2345 85 3 23 chr20 18704030 18704335 -47963670 - AluSg SINE Alu -11 299 1 758 277 62 30 chr20 18706315 18706672 -47961333 + LTR16A1 LTR ERVL 106 457 0 930 167 0 0 chr20 18707298 18707527 -47960478 + CT-rich Low_complexity Low_complexity 1 229 0 740 188 9 13 chr20 18707541 18707771 -47960234 + CT-rich Low_complexity Low_complexity 1 228 0 1107 168 84 15 chr20 18707780 18707983 -47960022 - U3 snRNA snRNA 0 217 1 1870 142 17 13 chr20 18708006 18708308 -47959697 + MER1B DNA MER1_type 37 339 0 294 169 0 84 chr20 18708388 18708459 -47959546 + MER103 DNA DNA 48 112 -54 245 29 29 0 chr20 18709054 18709088 -47958917 + (TC)n Simple_repeat Simple_repeat 2 36 0 15292 147 24 5 chr20 18709095 18711468 -47956537 + Tigger1 DNA MER2_type 1 2418 0 284 319 55 11 chr20 18711473 18711564 -47956441 + L2 LINE L2 3169 3263 -50 304 136 15 15 chr20 18711592 18711658 -47956347 + GA-rich Low_complexity Low_complexity 3 68 0 429 70 0 0 chr20 18712846 18712903 -47955102 + (TA)n Simple_repeat Simple_repeat 1 57 0 2026 96 52 0 chr20 18713520 18713790 -47954215 - AluSx SINE Alu -28 284 1 1880 46 0 0 chr20 18714278 18714495 -47953510 + L1PA4 LINE L1 5936 6152 -3 411 324 6 6 chr20 18715133 18715312 -47952693 + (TG)n Simple_repeat Simple_repeat 2 180 0 2044 128 20 0 chr20 18715424 18715728 -47952277 - AluSx SINE Alu 0 312 3 215 387 99 0 chr20 18715995 18716106 -47951899 - L2 LINE L2 0 3313 3192 * 259 139 0 0 chr20 18716105 18716148 -47951857 - L2 LINE L2 -302 2970 2928 269 290 27 0 chr20 18716190 18716310 -47951695 - MLT1E LTR MaLR -366 183 20 4497 145 44 20 chr20 18716719 18716737 -47951268 - L1MA8 LINE L1 -10 6281 6265 234 0 0 0 chr20 18716737 18716763 -47951242 + (CA)n Simple_repeat Simple_repeat 2 27 0 4497 145 44 20 chr20 18716763 18717546 -47950459 - L1MA8 LINE L1 -26 6265 5461 3284 24 0 3 chr20 18717546 18717922 -47950083 - L1P LINE L1 -1851 4295 3921 9113 23 1 0 chr20 18717922 18719697 -47948308 + L1PA3 LINE L1 4377 6152 -3 28 0 0 0 chr20 18719697 18719725 -47948280 + AT_rich Low_complexity Low_complexity 1 28 0 1994 152 16 9 chr20 18719725 18720172 -47947833 - L1MA8 LINE L1 -743 5403 5024 488 126 0 92 chr20 18720177 18720264 -47947741 + MLT1A1 LTR MaLR 116 194 -171 1617 174 0 29 chr20 18720296 18720577 -47947428 - AluJo SINE Alu -39 273 1 294 120 53 107 chr20 18720577 18720652 -47947353 + MSTB2 LTR MaLR 358 457 0 1659 152 11 7 chr20 18720652 18720935 -47947070 - L1M3e LINE L1 -6746 284 1 726 205 44 31 chr20 18720941 18721249 -47946756 + L1ME2 LINE L1 5770 6155 -9 229 299 0 39 chr20 18721502 18721579 -47946426 + C-rich Low_complexity Low_complexity 1 74 0 459 266 11 0 chr20 18721995 18722089 -47945916 + MER5A DNA MER1_type 9 103 -86 180 183 290 21 chr20 18722029 18722122 -47945883 - MER5A DNA MER1_type -31 158 41 * 1726 170 7 0 chr20 18724687 18724963 -47943042 + AluSx SINE Alu 1 278 -34 249 33 0 0 chr20 18724963 18724993 -47943012 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 239 285 47 50 chr20 18725283 18725581 -47942424 + L1M4 LINE L1 4028 4324 -1822 1523 171 119 29 chr20 18726363 18726742 -47941263 + L1MB7 LINE L1 5734 6146 -38 331 243 103 18 chr20 18726830 18726997 -47941008 + L1MC4 LINE L1 7609 7899 -143 26 50 0 0 chr20 18726997 18727037 -47940968 + AT_rich Low_complexity Low_complexity 1 40 0 344 330 68 57 chr20 18727237 18727412 -47940593 + L1M4 LINE L1 4573 4745 -1401 2131 127 6 13 chr20 18727412 18727726 -47940279 + AluSx SINE Alu 1 312 0 344 330 68 57 chr20 18727726 18727920 -47940085 + L1M4 LINE L1 4745 4946 -1200 1881 157 58 32 chr20 18728275 18728815 -47939190 - MLT2A2 LTR ERVL 0 554 1 558 0 0 0 chr20 18729420 18729482 -47938523 + (GAAA)n Simple_repeat Simple_repeat 4 65 0 1208 288 44 15 chr20 18729758 18730213 -47937792 + MLT1J LTR MaLR 24 491 -20 241 259 0 25 chr20 18730504 18730585 -47937420 - MLT1L LTR MaLR -115 500 422 1445 285 53 20 chr20 18731251 18732137 -47935868 - L1ME3A LINE L1 -223 5947 5030 3582 165 58 53 chr20 18732294 18733211 -47934794 - L1MB3 LINE L1 -7 6176 5260 1346 114 9 9 chr20 18733221 18733441 -47934564 - LTR7 LTR ERV1 0 450 231 353 165 253 11 chr20 18733443 18733534 -47934471 - LTR7 LTR ERV1 -337 113 1 600 210 45 6 chr20 18733538 18733695 -47934310 - L1MB3 LINE L1 -896 5250 5088 1662 206 40 11 chr20 18733775 18734154 -47933851 - MLT1B LTR MaLR 0 390 1 612 238 24 73 chr20 18734362 18734568 -47933437 + MIR SINE MIR 66 261 -1 205 337 24 12 chr20 18735065 18735148 -47932857 - MIR SINE MIR -28 234 151 713 201 64 60 chr20 18735179 18735428 -47932577 + LTR48B LTR ERV1 1 250 -394 380 227 111 54 chr20 18735440 18735765 -47932240 + LTR48 LTR ERV1 252 729 -4 458 176 141 9 chr20 18735775 18735898 -47932107 - MIR SINE MIR -56 152 13 394 343 130 0 chr20 18736209 18736422 -47931583 + MIR SINE MIR 5 245 -17 2963 192 18 15 chr20 18737188 18737848 -47930157 + L1MB7 LINE L1 5508 6169 -15 1112 162 28 14 chr20 18737966 18738182 -47929823 + MER20 DNA MER1_type 1 219 0 201 372 64 0 chr20 18739087 18739181 -47928824 - MER5B DNA MER1_type -72 106 7 428 290 65 85 chr20 18740079 18740327 -47927678 - MIR SINE MIR -8 254 12 252 209 202 23 chr20 18740414 18740543 -47927462 + MER103 DNA DNA 13 164 -2 3761 189 46 57 chr20 18740741 18742214 -47925791 - L1M2 LINE L1 -743 6363 5058 1311 223 61 9 chr20 18742212 18742557 -47925448 - L1M2 LINE L1 -6667 363 1 * 241 330 80 0 chr20 18743076 18743188 -47924817 - L2 LINE L2 -4 3268 3148 202 300 0 0 chr20 18743628 18743678 -47924327 - MIR SINE MIR -93 115 66 236 219 0 14 chr20 18744112 18744185 -47923820 + (TTCA)n Simple_repeat Simple_repeat 1 72 0 810 21 0 0 chr20 18744838 18744931 -47923074 - L1PA5 LINE L1 -9 6145 6053 2179 23 0 0 chr20 18744931 18745193 -47922812 + L1PA5 LINE L1 5780 6041 -113 358 322 64 18 chr20 18745587 18745780 -47922225 - MIR SINE MIR -61 201 3 402 186 158 23 chr20 18747108 18747253 -47920752 + MIR SINE MIR 50 208 -54 28 29 0 0 chr20 18747451 18747486 -47920519 + AT_rich Low_complexity Low_complexity 1 35 0 405 0 0 0 chr20 18748694 18748739 -47919266 + (CA)n Simple_repeat Simple_repeat 1 45 0 488 268 7 65 chr20 18748785 18748880 -47919125 + MER5A DNA MER1_type 60 146 -43 1953 154 9 46 chr20 18748880 18749230 -47918775 + MER1B DNA MER1_type 1 337 0 488 268 7 65 chr20 18749230 18749272 -47918733 + MER5A DNA MER1_type 146 189 0 508 183 34 115 chr20 18750828 18751036 -47916969 - MER102a DNA MER1_type 0 330 140 276 100 0 0 chr20 18751079 18751119 -47916886 + (A)n Simple_repeat Simple_repeat 1 40 0 689 307 4 31 chr20 18751148 18751376 -47916629 + MIR SINE MIR 41 262 0 6532 117 26 31 chr20 18751906 18752982 -47915023 + MER11C LTR ERVK 1 1071 0 214 381 42 17 chr20 18753465 18753583 -47914422 + L2 LINE L2 3116 3236 -36 443 328 62 17 chr20 18755188 18755365 -47912640 - MIR3 SINE MIR -4 204 20 431 284 249 10 chr20 18755634 18755831 -47912174 - MIR SINE MIR 0 262 19 692 266 109 39 chr20 18756166 18756605 -47911400 - LTR33 LTR ERVL -4 517 48 304 258 91 53 chr20 18756892 18757024 -47910981 - HAL1 LINE L1 -2367 140 4 23 33 0 0 chr20 18757102 18757132 -47910873 + AT_rich Low_complexity Low_complexity 1 30 0 32 0 0 0 chr20 18757166 18757198 -47910807 + AT_rich Low_complexity Low_complexity 1 32 0 308 326 0 0 chr20 18757343 18757432 -47910573 - L1MC4 LINE L1 -1339 6703 6615 477 250 0 0 chr20 18757442 18757582 -47910423 + (TA)n Simple_repeat Simple_repeat 1 140 0 235 292 0 0 chr20 18757590 18757679 -47910326 + L1MC4 LINE L1 6615 6703 -1339 305 177 0 16 chr20 18757697 18757759 -47910246 + L1MC4 LINE L1 6648 6708 -1334 * 521 305 90 66 chr20 18757751 18758298 -47909707 - L1M4 LINE L1 -1988 4158 3599 369 271 96 16 chr20 18758454 18758642 -47909363 - L1M4 LINE L1 -2982 3164 2962 216 0 0 0 chr20 18758797 18758821 -47909184 + (A)n Simple_repeat Simple_repeat 1 24 0 181 0 0 65 chr20 18758922 18758953 -47909052 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2473 153 8 44 chr20 18760316 18760792 -47907213 - LTR9 LTR ERV1 -153 459 1 23 0 0 0 chr20 18762513 18762536 -47905469 + AT_rich Low_complexity Low_complexity 1 23 0 456 148 0 12 chr20 18762987 18763068 -47904937 + MADE1 DNA Mariner 1 80 0 386 282 243 34 chr20 18763279 18763485 -47904520 + MIR SINE MIR 14 262 0 23 0 0 0 chr20 18763856 18763879 -47904126 + AT_rich Low_complexity Low_complexity 1 23 0 330 354 15 0 chr20 18763884 18764014 -47903991 - L1ME LINE L1 -299 5822 5691 295 291 25 0 chr20 18764019 18764098 -47903907 - L2 LINE L2 0 3313 3233 430 181 57 0 chr20 18764104 18764209 -47903796 - L1ME LINE L1 -436 5685 5575 1599 204 7 0 chr20 18764288 18764703 -47903302 - AluJo SINE Alu 0 417 1 251 274 55 0 chr20 18766531 18766604 -47901401 + MER5C DNA MER1_type 48 124 -200 822 250 49 88 chr20 18766612 18767190 -47900815 - MLT1H1 LTR MaLR 0 555 1 766 330 17 10 chr20 18768436 18768727 -47899278 + L3 LINE CR1 1218 1510 -67 23 0 0 0 chr20 18769147 18769170 -47898835 + AT_rich Low_complexity Low_complexity 1 23 0 331 258 153 0 chr20 18769720 18769844 -47898161 - L1ME4a LINE L1 -1 6120 5978 227 256 12 105 chr20 18770220 18770306 -47897699 + L2 LINE L2 3234 3311 -2 495 139 79 0 chr20 18770972 18771073 -47896932 - L1MA9 LINE L1 -6 6306 6198 1196 220 75 8 chr20 18771701 18772248 -47895757 + MLT1E1 LTR MaLR 3 644 -10 2219 66 45 3 chr20 18772264 18772552 -47895453 - AluY SINE Alu -11 300 1 346 304 182 6 chr20 18773203 18773384 -47894621 + MIR SINE MIR 1 213 -49 387 0 0 0 chr20 18773675 18773718 -47894287 + (CA)n Simple_repeat Simple_repeat 2 44 0 954 220 59 28 chr20 18773991 18774277 -47893728 + Charlie4a DNA MER1_type 17 311 -197 1620 212 129 8 chr20 18774340 18774727 -47893278 + L1MD3 LINE L1 7552 7985 -10 723 195 68 21 chr20 18774753 18774943 -47893062 + Charlie4a DNA MER1_type 310 508 0 306 290 110 0 chr20 18776353 18776453 -47891552 - MIR SINE MIR -18 244 134 186 43 0 0 chr20 18776483 18776506 -47891499 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1677 185 3 11 chr20 18776509 18776796 -47891209 - AluJo SINE Alu -25 287 3 6787 193 28 39 chr20 18777003 18777882 -47890123 - L1P LINE L1 -1774 4372 3517 2358 129 33 30 chr20 18777882 18778245 -47889760 - THE1B LTR MaLR 0 364 1 6787 193 28 39 chr20 18778245 18778913 -47889092 - L1P LINE L1 -2629 3517 2843 6853 165 18 12 chr20 18778923 18779294 -47888711 - L1PA12 LINE L1 -6444 1137 770 1766 176 23 13 chr20 18779294 18779601 -47888404 + AluSx SINE Alu 1 310 -2 6853 165 18 12 chr20 18779601 18780354 -47887651 - L1PA12 LINE L1 -6811 770 6 851 277 21 0 chr20 18780884 18781122 -47886883 + MIR SINE MIR 12 254 -8 267 279 153 0 chr20 18781771 18781882 -47886123 - L2 LINE L2 -8 3264 3137 736 280 34 13 chr20 18781907 18782143 -47885862 - MIR SINE MIR -21 241 1 294 318 12 12 chr20 18782786 18782871 -47885134 + L2 LINE L2 3169 3253 -19 227 244 22 22 chr20 18782914 18782991 -47885014 + GA-rich Low_complexity Low_complexity 4 83 -10 2879 162 71 82 chr20 18782991 18783080 -47884925 - LTR8A LTR ERV1 0 727 639 2101 130 0 13 chr20 18783080 18783380 -47884625 + AluSg SINE Alu 1 296 -14 2879 162 71 82 chr20 18783380 18784025 -47883980 - LTR8A LTR ERV1 -88 639 1 227 244 22 22 chr20 18784025 18784037 -47883968 + GA-rich Low_complexity Low_complexity 82 93 0 304 221 53 21 chr20 18784702 18784797 -47883208 - MIR SINE MIR -44 218 121 205 270 160 76 chr20 18785179 18785416 -47882589 - L2 LINE L2 -94 3178 2922 1268 220 150 37 chr20 18786664 18787145 -47880860 - MLT1H LTR MaLR -2 547 13 33 0 0 0 chr20 18787165 18787198 -47880807 + AT_rich Low_complexity Low_complexity 1 33 0 324 102 0 0 chr20 18787318 18787367 -47880638 + (TC)n Simple_repeat Simple_repeat 1 49 0 562 244 8 0 chr20 18788069 18788200 -47879805 + MLT2F LTR ERVL 532 663 0 748 279 116 50 chr20 18788270 18788650 -47879355 - LTR16C LTR ERVL 0 491 87 224 374 15 38 chr20 18788729 18788860 -47879145 + MIR3 SINE MIR 30 157 -51 1638 203 124 6 chr20 18789575 18789929 -47878076 - MSTD LTR MaLR 0 396 1 1200 256 59 28 chr20 18790032 18790423 -47877582 + LTR16A1 LTR ERVL 50 452 -5 238 356 93 0 chr20 18790823 18790941 -47877064 + MIR SINE MIR 23 151 -111 237 314 14 0 chr20 18792316 18792386 -47875619 - L2 LINE L2 -50 3263 3193 663 266 131 5 chr20 18792670 18792869 -47875136 - MIR SINE MIR -24 238 15 1365 143 9 19 chr20 18792998 18793214 -47874791 + L1MB5 LINE L1 5953 6166 -8 275 303 22 34 chr20 18793317 18793406 -47874599 - L2 LINE L2 -177 3095 3008 347 342 38 41 chr20 18793817 18794156 -47873849 + MER110-int LTR ERV1 2105 2442 -2205 902 288 50 20 chr20 18795744 18796046 -47871959 - LTR16C LTR ERVL 0 491 181 419 254 15 23 chr20 18796419 18796549 -47871456 + LTR67 LTR ERVL 429 557 0 3209 108 0 0 chr20 18798119 18798572 -47869433 - L1P LINE L1 -1276 4870 4418 * 3951 65 11 39 chr20 18798570 18799135 -47868870 + L1P LINE L1 4851 5399 -747 387 43 14 57 chr20 18799135 18799184 -47868821 + L1PA4 LINE L1 6087 6153 -2 192 40 0 0 chr20 18799196 18799221 -47868784 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 397 155 14 0 chr20 18799344 18799415 -47868590 - Tigger6 DNA MER2_type -93 1504 1433 6365 71 0 1 chr20 18799415 18800180 -47867825 + L1PA7 LINE L1 5386 6149 -5 423 346 15 0 chr20 18800251 18800387 -47867618 - LTR16C LTR ERVL -240 251 114 559 313 96 54 chr20 18800703 18801525 -47866480 - L2 LINE L2 0 3272 2430 209 360 30 0 chr20 18801734 18801834 -47866171 - L2 LINE L2 0 3272 3170 528 250 14 29 chr20 18801868 18802008 -47865997 - MIR SINE MIR -65 197 60 3088 102 20 13 chr20 18802984 18803435 -47864570 - L1MA3 LINE L1 0 6305 5852 310 188 0 0 chr20 18804300 18804356 -47863649 - MLT2C2 LTR ERVL 0 464 416 24 0 0 0 chr20 18804371 18804395 -47863610 + AT_rich Low_complexity Low_complexity 1 24 0 498 222 11 0 chr20 18804449 18804539 -47863466 - MLT2B1 LTR ERVL -78 442 352 1631 170 79 0 chr20 18804539 18804816 -47863189 - HERVL LTR ERVL -990 4774 4476 255 239 33 54 chr20 18804807 18804899 -47863106 - HERVL LTR ERVL -5395 259 170 * 240 276 64 67 chr20 18804984 18805220 -47862785 + L1ME LINE L1 4177 4413 -1733 2401 114 12 0 chr20 18805220 18805562 -47862443 + L1PA14 LINE L1 5816 6161 0 240 276 64 67 chr20 18805562 18805683 -47862322 + L1ME LINE L1 4413 4533 -1613 287 246 82 71 chr20 18805695 18805878 -47862127 + L1ME LINE L1 5609 5763 -399 1141 0 29 0 chr20 18806191 18806330 -47861675 + (TTTTA)n Simple_repeat Simple_repeat 4 146 0 1750 172 4 0 chr20 18806332 18806611 -47861394 - AluJb SINE Alu -32 280 1 192 236 101 90 chr20 18806806 18806895 -47861110 + L2 LINE L2 3171 3260 -12 2376 66 0 26 chr20 18807756 18808058 -47859947 - AluY SINE Alu 0 311 18 405 58 0 0 chr20 18808153 18808205 -47859800 + (CA)n Simple_repeat Simple_repeat 2 53 0 297 229 157 78 chr20 18808385 18808538 -47859467 - MIR SINE MIR -89 173 9 2105 142 0 0 chr20 18809446 18809756 -47858249 + AluSg SINE Alu 1 310 0 384 285 90 28 chr20 18809847 18809991 -47858014 - L2 LINE L2 0 3313 3161 22 35 0 0 chr20 18810316 18810345 -47857660 + AT_rich Low_complexity Low_complexity 1 29 0 193 225 0 0 chr20 18810353 18810393 -47857612 - MIR SINE MIR -151 111 72 269 320 10 21 chr20 18811658 18811755 -47856250 + L2 LINE L2 3137 3232 -40 281 319 52 26 chr20 18811881 18811997 -47856008 - MIR3 SINE MIR -12 196 78 271 281 107 16 chr20 18812268 18812389 -47855616 + L2 LINE L2 3182 3313 0 201 159 0 0 chr20 18815097 18815141 -47852864 + A-rich Low_complexity Low_complexity 1 44 0 326 389 35 20 chr20 18815380 18815578 -47852427 + MIR3 SINE MIR 6 206 -2 424 283 9 0 chr20 18817038 18817151 -47850854 - MER94 DNA DNA -17 117 4 1392 199 75 15 chr20 18820616 18820947 -47847058 + MLT1A1 LTR MaLR 15 365 0 1838 230 93 51 chr20 18821169 18821738 -47846267 + MLT1G1 LTR MaLR 3 595 0 2259 125 0 0 chr20 18822173 18822477 -47845528 - AluSx SINE Alu -8 304 1 4254 197 10 25 chr20 18823439 18823939 -47844066 + L1 LINE L1 2611 3117 -3029 2113 134 0 0 chr20 18823939 18824223 -47843782 + AluSg SINE Alu 12 295 -15 4254 197 10 25 chr20 18824223 18824762 -47843243 + L1 LINE L1 3117 3634 -2512 194 328 9 86 chr20 18825791 18825907 -47842098 + MIR3 SINE MIR 65 171 -37 1564 253 52 37 chr20 18825914 18826078 -47841927 + L1ME3A LINE L1 5560 5720 -450 1205 197 170 58 chr20 18826078 18826530 -47841475 + MLT1D LTR MaLR 3 505 0 1564 253 52 37 chr20 18826530 18826962 -47841043 + L1ME3A LINE L1 5720 6165 -5 1931 154 0 0 chr20 18826981 18827279 -47840726 + AluJo SINE Alu 1 298 -14 627 26 0 0 chr20 18828714 18828791 -47839214 - L1PA4 LINE L1 -8 6147 6071 627 248 39 63 chr20 18828828 18828906 -47839099 - MIR SINE MIR -6 256 178 795 294 85 43 chr20 18828906 18829376 -47838629 + LTR16C LTR ERVL 2 491 0 627 248 39 63 chr20 18829376 18829443 -47838562 - MIR SINE MIR -84 178 115 1721 193 42 8 chr20 18829443 18829796 -47838209 + MLT1A1 LTR MaLR 1 365 0 627 248 39 63 chr20 18829796 18829855 -47838150 - MIR SINE MIR -147 115 56 1391 169 35 12 chr20 18831166 18831421 -47836584 + AluJo SINE Alu 46 306 -6 714 58 0 29 chr20 18832501 18832604 -47835401 - L1PA4 LINE L1 0 6155 6056 285 291 75 22 chr20 18833151 18833285 -47834720 + MIR3 SINE MIR 23 163 -45 652 252 100 98 chr20 18833759 18834287 -47833718 + MLT1H1 LTR MaLR 26 554 -1 5450 142 9 27 chr20 18834897 18835298 -47832707 - L1P4 LINE L1 -437 5726 5319 2377 74 0 3 chr20 18835298 18835595 -47832410 + AluY SINE Alu 1 296 -15 5450 142 9 27 chr20 18835595 18836626 -47831379 - L1P4 LINE L1 -844 5319 4313 3029 94 25 0 chr20 18836626 18837054 -47830951 + L1PA13 LINE L1 5713 6157 -6 1102 140 109 8 chr20 18837083 18837340 -47830665 - L1MC2 LINE L1 -9 6335 6053 7940 173 97 65 chr20 18837341 18837870 -47830135 - L1MC3 LINE L1 -31 8172 7662 253 322 0 0 chr20 18837870 18837960 -47830045 - MLT1F1 LTR MaLR -442 125 36 7940 173 97 65 chr20 18837960 18839736 -47828269 - L1MC3 LINE L1 -541 7662 5701 41808 40 4 1 chr20 18839740 18845868 -47822137 - L1PA3 LINE L1 0 6155 12 1118 249 6 0 chr20 18845869 18846199 -47821806 - L1MC3 LINE L1 -846 5718 5387 * 4001 233 114 23 chr20 18846198 18847767 -47820238 - L1MC3 LINE L1 -2473 4091 2315 2871 0 0 3 chr20 18847767 18848079 -47819926 - AluYa5 SINE Alu 0 311 1 4001 233 114 23 chr20 18848079 18848416 -47819589 - L1MC3 LINE L1 -4249 2315 2010 1790 163 3 7 chr20 18848416 18848698 -47819307 - AluJo SINE Alu -31 281 1 6147 144 19 61 chr20 18848722 18849025 -47818980 - Tigger3b DNA MER2_type -1802 1226 912 3410 125 15 2 chr20 18849025 18849562 -47818443 + L1PA16 LINE L1 5620 6163 -3 6147 144 19 61 chr20 18849562 18850301 -47817704 - Tigger3b DNA MER2_type -2116 912 245 2332 86 3 0 chr20 18850301 18850591 -47817414 + AluSc SINE Alu 1 291 -18 6147 144 19 61 chr20 18850591 18850827 -47817178 - Tigger3b DNA MER2_type -2783 245 1 3359 198 26 36 chr20 18850831 18851019 -47816986 - L1MC3 LINE L1 -4494 2070 1882 963 114 0 0 chr20 18851019 18851151 -47816854 - FLAM_C SINE Alu 0 133 2 3359 198 26 36 chr20 18851151 18852080 -47815925 - L1MC3 LINE L1 -4682 1882 813 905 227 35 63 chr20 18852099 18852416 -47815589 - L1MC3 LINE L1 -5630 415 108 2392 103 0 0 chr20 18852748 18853058 -47814947 - AluSg SINE Alu 0 310 1 272 242 83 76 chr20 18853719 18853851 -47814154 - MIR3 SINE MIR -25 183 51 343 376 19 12 chr20 18855038 18855200 -47812805 + L2 LINE L2 2928 3090 -182 * 743 268 18 53 chr20 18855198 18855426 -47812579 + L2 LINE L2 2240 2459 -855 1001 276 68 16 chr20 18855426 18855850 -47812155 - LTR16A1 LTR ERVL 0 457 12 1564 276 99 4 chr20 18856559 18856578 -47811427 + MLT1G1 LTR MaLR 1 17 -578 258 32 0 0 chr20 18856578 18856609 -47811396 + (GAAAA)n Simple_repeat Simple_repeat 2 32 0 1564 276 99 4 chr20 18856609 18857125 -47810880 + MLT1G1 LTR MaLR 17 587 -8 2221 261 69 64 chr20 18857412 18858546 -47809459 + L2 LINE L2 2156 3312 -1 645 316 136 35 chr20 18858556 18859233 -47808772 + L2 LINE L2 2221 2965 -349 285 29 0 0 chr20 18859755 18859789 -47808216 + (TG)n Simple_repeat Simple_repeat 2 35 0 916 239 54 29 chr20 18859801 18860178 -47807827 - MLT2D LTR ERVL -69 395 14 235 217 17 17 chr20 18860516 18860576 -47807429 + LTR16A1 LTR ERVL 395 454 -3 1561 112 181 8 chr20 18861363 18861622 -47806383 - AluSg1 SINE Alu -5 304 1 216 356 37 37 chr20 18862233 18862396 -47805609 - L2 LINE L2 -552 2762 2600 254 326 63 11 chr20 18862694 18862789 -47805216 + MIR3 SINE MIR 85 184 -24 6754 56 4 37 chr20 18863912 18865561 -47802444 + L1PA7 LINE L1 4517 6141 -13 386 216 0 0 chr20 18865611 18865699 -47802306 + MER94 DNA DNA 13 100 -34 469 326 57 11 chr20 18866102 18866277 -47801728 - MIR3 SINE MIR -21 187 5 24 0 0 0 chr20 18866312 18866336 -47801669 + AT_rich Low_complexity Low_complexity 1 24 0 389 264 115 29 chr20 18866374 18866582 -47801423 - L1ME4a LINE L1 -58 6063 5838 1073 284 56 33 chr20 18866842 18867357 -47800648 + L1MC4a LINE L1 5407 5933 -1875 568 318 131 4 chr20 18868465 18868710 -47799295 + LTR16C LTR ERVL 82 357 -134 352 372 62 42 chr20 18868742 18869143 -47798862 + L1MEd LINE L1 3 411 -5708 912 277 86 58 chr20 18869216 18870386 -47797619 + L1MEd LINE L1 458 1712 -4598 534 226 38 19 chr20 18870583 18870742 -47797263 + L1ME3A LINE L1 6008 6169 -1 353 303 86 46 chr20 18871092 18871416 -47796589 + L1MEd LINE L1 2278 2614 -3515 3076 63 47 0 chr20 18871437 18871863 -47796142 - L1PA7 LINE L1 -301 5853 5408 2381 52 0 0 chr20 18871863 18872153 -47795852 + L1PA7 LINE L1 5847 6137 -17 1895 245 75 30 chr20 18873031 18873630 -47794375 - MLT1E2 LTR MaLR 0 626 1 863 297 72 11 chr20 18874188 18874565 -47793440 - LTR16C LTR ERVL -11 480 81 873 256 49 49 chr20 18875457 18875824 -47792181 - L1ME1 LINE L1 -5 6161 5795 1462 204 62 73 chr20 18875877 18876343 -47791662 - MLT1C LTR MaLR 0 467 7 6870 24 0 0 chr20 18878712 18879509 -47788496 + L1PA4 LINE L1 5356 6152 -3 25 0 0 0 chr20 18879963 18879988 -47788017 + AT_rich Low_complexity Low_complexity 1 25 0 1511 162 77 8 chr20 18880104 18880455 -47787550 - L1MA4A LINE L1 0 6303 5929 8289 163 26 10 chr20 18880625 18882892 -47785113 - L1MA4A LINE L1 -379 5924 3612 234 243 26 79 chr20 18882969 18883158 -47784847 + L1ME4a LINE L1 5943 6121 0 25 51 0 0 chr20 18883608 18883647 -47784358 + AT_rich Low_complexity Low_complexity 1 39 0 2899 76 15 2 chr20 18884643 18885262 -47782743 - L1PA7 LINE L1 -593 5561 4939 4784 59 2 0 chr20 18885262 18885854 -47782151 + L1PA7 LINE L1 5560 6154 0 2481 42 0 0 chr20 18885855 18886138 -47781867 + AluY SINE Alu 17 299 -12 447 311 0 34 chr20 18886400 18886519 -47781486 - MER5B DNA MER1_type -63 115 1 214 317 179 28 chr20 18886533 18886678 -47781327 + MER5A DNA MER1_type 21 187 -2 * 505 198 18 36 chr20 18886581 18886692 -47781313 - MER5A DNA MER1_type -77 112 4 213 271 71 0 chr20 18887667 18887737 -47780268 - MIR SINE MIR -47 215 141 645 221 62 7 chr20 18887782 18887927 -47780078 - MIR SINE MIR -65 197 45 21 36 0 0 chr20 18888275 18888303 -47779702 + AT_rich Low_complexity Low_complexity 1 28 0 882 259 202 26 chr20 18888349 18888885 -47779120 + MLT1G LTR MaLR 1 584 -6 31 0 0 0 chr20 18889475 18889506 -47778499 + AT_rich Low_complexity Low_complexity 1 31 0 447 114 46 23 chr20 18889511 18889686 -47778319 + (TA)n Simple_repeat Simple_repeat 2 180 0 1149 246 34 15 chr20 18890743 18891068 -47776937 - MER87 LTR ERV1 0 541 211 302 339 17 17 chr20 18891221 18891336 -47776669 - MER5B DNA MER1_type -55 123 9 2261 55 0 0 chr20 18891873 18892187 -47775818 - AluY SINE Alu 0 325 12 3680 148 43 3 chr20 18892326 18893033 -47774972 - L1MC1 LINE L1 -375 5958 5225 405 0 0 0 chr20 18893219 18893264 -47774741 + (GGAA)n Simple_repeat Simple_repeat 4 48 0 828 259 149 58 chr20 18893708 18894348 -47773657 + L2 LINE L2 2579 3306 -7 317 310 18 9 chr20 18894463 18894576 -47773429 - MIR3 SINE MIR -32 176 63 320 285 77 0 chr20 18895136 18895266 -47772739 - MIR3 SINE MIR -4 204 65 345 171 34 0 chr20 18895464 18895552 -47772453 + (TA)n Simple_repeat Simple_repeat 2 92 0 225 265 123 31 chr20 18895686 18895848 -47772157 - L1ME LINE L1 -730 5436 5260 282 143 0 0 chr20 18895874 18895923 -47772082 + (TA)n Simple_repeat Simple_repeat 1 49 0 529 305 72 15 chr20 18895924 18896324 -47771681 - L1ME LINE L1 -921 5225 4803 198 239 45 75 chr20 18897586 18897653 -47770352 + MIR3 SINE MIR 15 79 -129 307 234 38 21 chr20 18897753 18897874 -47770131 - MIR SINE MIR -68 140 64 21 0 0 0 chr20 18898224 18898245 -47769760 + AT_rich Low_complexity Low_complexity 1 21 0 472 241 108 24 chr20 18898838 18899004 -47769001 + MER5A DNA MER1_type 9 188 -1 520 320 68 15 chr20 18899569 18899775 -47768230 - MIR SINE MIR -14 248 32 227 217 17 0 chr20 18899953 18900013 -47767992 - MLT1K LTR MaLR -6 582 522 307 299 102 83 chr20 18902709 18903033 -47764972 - L1MC4a LINE L1 -1639 6169 5840 562 188 8 8 chr20 18903039 18903156 -47764849 - L1MC4a LINE L1 -2004 5804 5688 1233 236 94 13 chr20 18903158 18903539 -47764466 + MLT1D LTR MaLR 2 413 -92 345 352 92 28 chr20 18903559 18903678 -47764327 - L1MC4a LINE L1 -798 5348 5238 1977 123 3 10 chr20 18903678 18903971 -47764034 - AluSq SINE Alu -1 312 22 345 352 92 28 chr20 18903971 18904344 -47763661 - L1MC4a LINE L1 -908 5238 4812 396 325 103 81 chr20 18904428 18904594 -47763411 + L1M2 LINE L1 45 206 -6643 366 61 0 0 chr20 18904594 18904643 -47763362 + (TGAG)n Simple_repeat Simple_repeat 2 50 0 396 325 103 81 chr20 18904643 18904824 -47763181 + L1M2 LINE L1 206 400 -6449 15749 210 20 21 chr20 18905640 18906749 -47761256 + L1PA15-16 LINE L1 1668 2776 -4073 207 0 0 0 chr20 18906749 18906772 -47761233 + (CA)n Simple_repeat Simple_repeat 2 24 0 15749 210 20 21 chr20 18906772 18907961 -47760044 + L1PA15-16 LINE L1 2776 3964 -2885 2257 118 0 0 chr20 18907961 18908258 -47759747 + AluSg SINE Alu 1 297 -13 15749 210 20 21 chr20 18908258 18909495 -47758510 + L1PA15-16 LINE L1 3964 5183 -1666 1591 21 0 16 chr20 18909495 18909683 -47758322 + AluYa5 SINE Alu 127 311 0 15749 210 20 21 chr20 18909683 18910557 -47757448 + L1PA15-16 LINE L1 5183 6056 -793 332 232 0 0 chr20 18910557 18910635 -47757370 + AluS SINE Alu 1 62 -238 27 29 0 0 chr20 18961033 18961067 -47706938 + AT_rich Low_complexity Low_complexity 1 34 0 2475 50 7 3 chr20 18961110 18961409 -47706596 + AluY SINE Alu 1 300 -11 2626 143 38 2 chr20 18961429 18961906 -47706099 + L1MB3 LINE L1 5687 6180 -3 2246 200 167 22 chr20 18961926 18962592 -47705413 - L1MC4a LINE L1 -53 7755 6994 1943 143 20 7 chr20 18962703 18963004 -47705001 + AluSq SINE Alu 1 305 -8 23 33 0 0 chr20 18963135 18963165 -47704840 + AT_rich Low_complexity Low_complexity 1 30 0 2183 237 42 19 chr20 18963555 18964132 -47703873 - MLT1G LTR MaLR 0 590 1 721 260 135 5 chr20 18964352 18964544 -47703461 - MIR SINE MIR -33 229 13 370 313 52 0 chr20 18964567 18964682 -47703323 + L2 LINE L2 3121 3241 -31 287 259 98 67 chr20 18964683 18965085 -47702920 + L1ME LINE L1 5298 5726 -395 * 6431 219 41 19 chr20 18965071 18967230 -47700775 - L1MB7 LINE L1 0 6682 4452 2415 81 0 0 chr20 18967230 18967526 -47700479 - AluY SINE Alu -15 296 1 6431 219 41 19 chr20 18967526 18968019 -47699986 - L1MB7 LINE L1 -2230 4452 3972 1297 166 28 101 chr20 18968019 18968483 -47699522 - L1MB7 LINE L1 -5164 1378 949 3342 67 9 0 chr20 18968512 18968947 -47699058 - L1PA7 LINE L1 -1 6153 5715 3119 78 16 2 chr20 18968947 18969370 -47698635 + L1PA7 LINE L1 5275 5703 -451 3341 256 31 34 chr20 18969376 18970320 -47697685 - L1MB7 LINE L1 -5585 957 17 367 227 17 34 chr20 18970344 18970463 -47697542 + L1ME LINE L1 5703 5819 -302 703 87 10 0 chr20 18970475 18970578 -47697427 + L1PA14 LINE L1 6057 6160 -1 324 0 0 0 chr20 18970647 18970683 -47697322 + (TG)n Simple_repeat Simple_repeat 2 37 0 36 40 0 0 chr20 18970878 18970928 -47697077 + AT_rich Low_complexity Low_complexity 1 50 0 350 285 62 21 chr20 18971283 18971427 -47696578 - MIR3 SINE MIR -54 154 5 23 0 0 0 chr20 18976111 18976134 -47691871 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr20 18976659 18976691 -47691314 + AT_rich Low_complexity Low_complexity 1 32 0 2030 130 0 0 chr20 18976737 18977021 -47690984 - AluSx SINE Alu 0 312 29 260 257 30 30 chr20 18977731 18977832 -47690173 - MIR SINE MIR -66 142 42 612 300 96 18 chr20 18978475 18978864 -47689141 - LTR16A LTR ERVL -9 441 1 275 104 21 0 chr20 18979914 18979962 -47688043 + (TA)n Simple_repeat Simple_repeat 1 49 0 2207 283 60 32 chr20 18980054 18981295 -47686710 - L2 LINE L2 -3 3310 2035 358 323 61 26 chr20 18982714 18982879 -47685126 + MIR3 SINE MIR 32 208 0 202 324 28 56 chr20 18982856 18982964 -47685041 - MIR SINE MIR -84 124 20 * 427 313 30 22 chr20 18983497 18983727 -47684278 - Charlie8 DNA MER1_type -2141 276 45 1139 284 200 46 chr20 18983750 18984580 -47683425 - L3 LINE CR1 -56 1521 564 191 239 56 42 chr20 18985154 18985225 -47682780 + MIR SINE MIR 66 137 -125 405 328 40 58 chr20 18985581 18985980 -47682025 - MLT1I LTR MaLR -2 407 16 511 261 121 52 chr20 18986206 18986700 -47681305 + MLT1H1 LTR MaLR 42 553 -2 288 53 0 0 chr20 18986961 18986999 -47681006 + (TA)n Simple_repeat Simple_repeat 1 38 0 389 294 17 17 chr20 18987215 18987372 -47680633 + MIR SINE MIR 37 189 -64 382 291 76 57 chr20 18987705 18987915 -47680090 + MIR SINE MIR 3 216 -46 710 258 104 22 chr20 18988103 18988331 -47679674 - HAL1 LINE L1 -31 2476 2268 321 26 0 0 chr20 18988331 18988369 -47679636 + (CA)n Simple_repeat Simple_repeat 2 39 0 710 258 104 22 chr20 18988369 18988543 -47679462 - HAL1 LINE L1 -239 2268 2041 11188 20 0 0 chr20 18988551 18990609 -47677396 + L1PA4 LINE L1 4088 6145 -10 637 122 0 0 chr20 18990639 18990729 -47677276 + FLAM_C SINE Alu 22 111 -32 694 300 123 11 chr20 18990743 18991286 -47676719 - HAL1 LINE L1 -475 2032 1429 2100 73 69 0 chr20 18991417 18991692 -47676313 + AluSp SINE Alu 9 302 -11 30 0 0 0 chr20 18991791 18991821 -47676184 + AT_rich Low_complexity Low_complexity 1 30 0 352 289 38 44 chr20 18992035 18992194 -47675811 - L1MC4a LINE L1 -1878 5930 5773 290 188 16 0 chr20 18992240 18992304 -47675701 - L1MC4a LINE L1 -440 5681 5617 251 228 0 0 chr20 18994014 18994071 -47673934 + (TA)n Simple_repeat Simple_repeat 1 57 0 213 94 0 0 chr20 18994119 18994151 -47673854 + (CA)n Simple_repeat Simple_repeat 1 32 0 280 214 10 10 chr20 18995046 18995144 -47672861 + (TAGA)n Simple_repeat Simple_repeat 1 98 0 2122 176 19 77 chr20 18996378 18996524 -47671481 - LTR54 LTR ERV1 0 510 357 3111 156 4 20 chr20 18996524 18997064 -47670941 - LTR26B LTR ERV1 0 531 1 2122 176 19 77 chr20 18997064 18997451 -47670554 - LTR54 LTR ERV1 -153 357 8 2275 120 33 64 chr20 18998716 18999140 -47668865 - MLT2D LTR ERVL -3 411 1 333 47 0 0 chr20 18999307 18999350 -47668655 + (TG)n Simple_repeat Simple_repeat 2 44 0 2058 172 24 5 chr20 19000384 19000767 -47667238 + MLT1B LTR MaLR 1 390 0 695 188 56 0 chr20 19001255 19001399 -47666606 + L1MC1 LINE L1 6176 6327 -6 347 249 47 74 chr20 19001655 19001912 -47666093 - L1ME4a LINE L1 -295 5826 5577 253 208 57 47 chr20 19001943 19002063 -47665942 - L1P4 LINE L1 -700 5466 5346 241 203 47 78 chr20 19002088 19002152 -47665853 + L2 LINE L2 3209 3270 -2 383 293 47 20 chr20 19002324 19002474 -47665531 - MIR SINE MIR -26 236 83 1639 217 25 15 chr20 19002586 19002978 -47665027 - MSTD LTR MaLR 0 396 1 663 285 127 20 chr20 19003053 19003254 -47664751 - L1MC4a LINE L1 -1763 6028 5850 228 35 0 0 chr20 19003254 19003283 -47664722 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 663 285 127 20 chr20 19003283 19003530 -47664475 - L1MC4a LINE L1 -1941 5850 5532 839 243 31 28 chr20 19003569 19003824 -47664181 - MLT1J LTR MaLR -2 509 254 373 296 55 76 chr20 19004464 19004711 -47663294 - L1MC4a LINE L1 -1542 4587 4347 2061 141 7 0 chr20 19004711 19005010 -47662995 - AluSx SINE Alu -11 301 1 373 296 55 76 chr20 19005010 19005106 -47662899 - L1MC4a LINE L1 -1782 4347 4251 241 286 48 0 chr20 19005214 19005319 -47662686 - L1P LINE L1 -1989 4157 4048 494 366 71 30 chr20 19005334 19005971 -47662034 - L1MC4a LINE L1 -2127 4002 3340 2623 32 0 6 chr20 19005979 19006291 -47661714 - AluY SINE Alu -1 310 1 641 292 149 53 chr20 19006387 19006877 -47661128 - HAL1 LINE L1 -875 1632 1096 288 0 0 0 chr20 19007099 19007131 -47660874 + (CA)n Simple_repeat Simple_repeat 2 33 0 206 206 44 44 chr20 19007205 19007273 -47660732 - MIR SINE MIR -191 71 4 349 90 30 0 chr20 19007361 19007428 -47660577 + (TTTA)n Simple_repeat Simple_repeat 4 72 0 1693 152 43 20 chr20 19007438 19007741 -47660264 - AluJo SINE Alu -2 310 1 25 31 0 0 chr20 19008584 19008616 -47659389 + AT_rich Low_complexity Low_complexity 1 32 0 363 289 89 34 chr20 19008998 19009233 -47658772 - L2 LINE L2 -343 2971 2724 408 346 50 21 chr20 19009577 19009829 -47658176 - L1MEc LINE L1 -3732 2397 2161 985 162 11 16 chr20 19010230 19010421 -47657584 + MER20 DNA MER1_type 17 206 -13 334 373 63 20 chr20 19011219 19011471 -47656534 - L1M4 LINE L1 -1311 4835 4573 308 337 92 25 chr20 19011490 19011653 -47656352 - L1MEc LINE L1 -5002 1117 944 41 17 0 17 chr20 19013505 19013536 -47654469 + AT_rich Low_complexity Low_complexity 1 32 -26 2077 121 3 0 chr20 19013536 19013818 -47654187 + AluSg SINE Alu 1 283 -27 41 17 0 17 chr20 19013818 19013845 -47654160 + AT_rich Low_complexity Low_complexity 32 58 0 325 378 32 16 chr20 19014303 19014488 -47653517 - HAL1 LINE L1 -742 1765 1578 185 65 32 0 chr20 19015055 19015086 -47652919 + (TA)n Simple_repeat Simple_repeat 2 33 0 283 142 71 12 chr20 19015132 19015301 -47652704 + (TA)n Simple_repeat Simple_repeat 1 179 0 439 38 119 6 chr20 19015323 19015471 -47652534 + (TA)n Simple_repeat Simple_repeat 2 171 -8 2008 136 0 10 chr20 19015471 19015765 -47652240 - AluSx SINE Alu -21 291 1 439 38 119 6 chr20 19015765 19015776 -47652229 + (TA)n Simple_repeat Simple_repeat 171 179 0 185 65 32 0 chr20 19015834 19015865 -47652140 + (TA)n Simple_repeat Simple_repeat 2 33 0 582 245 72 10 chr20 19015916 19016105 -47651900 + MIR SINE MIR 60 259 -3 257 223 43 53 chr20 19016127 19016221 -47651784 + L2 LINE L2 3221 3313 0 363 287 104 0 chr20 19016554 19016669 -47651336 + MIR SINE MIR 29 155 -107 444 221 74 40 chr20 19017379 19017528 -47650477 + MIR SINE MIR 39 192 -70 244 232 11 95 chr20 19017593 19017688 -47650317 + L2 LINE L2 3186 3272 0 365 246 115 52 chr20 19019498 19019689 -47648316 - L2 LINE L2 -4 3309 3107 1588 132 34 8 chr20 19019691 19019957 -47648048 - MSTA LTR MaLR -2 426 154 1540 137 4 8 chr20 19019957 19020212 -47647793 - MSTA LTR MaLR -174 254 1 585 300 72 45 chr20 19020222 19020445 -47647560 - L2 LINE L2 -222 3091 2863 1892 225 65 45 chr20 19020454 19020992 -47647013 - MLT1H LTR MaLR 0 549 1 473 87 0 0 chr20 19021353 19021422 -47646583 - MSTA LTR MaLR 0 428 360 2119 135 7 0 chr20 19021422 19021816 -47646189 + AluSx SINE Alu 2 397 0 1241 151 34 21 chr20 19021823 19022061 -47645944 - MSTA LTR MaLR -58 370 130 190 426 41 0 chr20 19022480 19022602 -47645403 + L2 LINE L2 3136 3262 -10 2102 93 0 43 chr20 19022603 19022904 -47645101 + AluSg1 SINE Alu 9 296 -13 184 211 26 0 chr20 19023540 19023578 -47644427 - MIR SINE MIR -138 70 32 1295 187 3 16 chr20 19024886 19025191 -47642814 - MER33 DNA MER1_type -4 320 20 267 298 12 0 chr20 19026812 19026896 -47641109 + L3b LINE CR1 1333 1417 -166 632 215 62 0 chr20 19028325 19028469 -47639536 + LTR16C LTR ERVL 331 483 -8 704 265 127 64 chr20 19031098 19031612 -47636393 - MLT1H LTR MaLR -3 546 1 952 249 73 13 chr20 19032367 19032668 -47635337 - LTR16C LTR ERVL -76 415 97 336 233 78 0 chr20 19033110 19033200 -47634805 + MIR SINE MIR 84 180 -82 956 190 37 2 chr20 19033979 19034250 -47633755 - MER110 LTR ERV1 -7 484 159 2321 118 45 24 chr20 19034250 19034402 -47633603 + MLT1B LTR MaLR 1 148 -242 1480 166 19 152 chr20 19034402 19034740 -47633265 - MLT1A1 LTR MaLR 0 365 -16 216 0 0 0 chr20 19034740 19034764 -47633241 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2154 113 3 3 chr20 19034766 19035050 -47632955 - AluSx SINE Alu -28 284 1 1480 166 19 152 chr20 19035050 19035129 -47632876 - MLT1A1 LTR MaLR -276 89 1 2321 118 45 24 chr20 19035129 19035358 -47632647 + MLT1B LTR MaLR 148 390 0 269 189 95 14 chr20 19035389 19035463 -47632542 - MIR SINE MIR -142 120 41 1331 248 70 28 chr20 19035696 19036055 -47631950 + LTR16C LTR ERVL 4 377 -114 332 204 80 35 chr20 19036286 19036399 -47631606 - LTR67 LTR ERVL -8 549 432 356 313 15 8 chr20 19037037 19037171 -47630834 + L2 LINE L2 3179 3313 0 253 229 37 92 chr20 19037440 19037549 -47630456 - MLT1L LTR MaLR 0 595 493 364 299 20 45 chr20 19037822 19038023 -47629982 - MLT1H LTR MaLR -259 290 95 1744 167 36 0 chr20 19038188 19038517 -47629488 + L1MC3 LINE L1 7430 7770 -15 316 243 47 6 chr20 19040204 19040373 -47627632 + (TA)n Simple_repeat Simple_repeat 2 177 0 323 318 16 23 chr20 19040540 19040669 -47627336 - MIR3 SINE MIR -21 187 60 31 0 0 0 chr20 19040943 19040974 -47627031 + AT_rich Low_complexity Low_complexity 1 31 0 1347 155 47 25 chr20 19041817 19042134 -47625871 - MER33 DNA MER1_type 0 324 1 2051 82 0 82 chr20 19042197 19042544 -47625461 + AluSg SINE Alu 1 322 0 295 263 122 78 chr20 19042689 19042894 -47625111 - MLT1L LTR MaLR -207 408 195 196 268 31 72 chr20 19043231 19043328 -47624677 - MIR SINE MIR -150 112 20 368 234 9 56 chr20 19043868 19043975 -47624030 - MIR SINE MIR 0 262 161 894 216 32 11 chr20 19044422 19044607 -47623398 + MER5A DNA MER1_type 1 189 0 1525 181 63 45 chr20 19044836 19045218 -47622787 + L1MC4 LINE L1 7654 8042 0 514 204 275 0 chr20 19045584 19045751 -47622254 + MIR SINE MIR 40 252 -10 234 0 0 0 chr20 19045796 19045822 -47622183 + (TA)n Simple_repeat Simple_repeat 2 27 0 374 236 22 0 chr20 19045875 19045964 -47622041 - MIR3 SINE MIR -46 162 72 295 277 0 12 chr20 19046836 19046919 -47621086 + MIR SINE MIR 69 150 -112 587 240 149 57 chr20 19046919 19047302 -47620703 - MLT1F LTR MaLR -2 540 123 315 0 0 0 chr20 19047313 19047348 -47620657 + (TG)n Simple_repeat Simple_repeat 2 36 0 3003 102 25 2 chr20 19047385 19047743 -47620262 - L1PB1 LINE L1 0 6151 5780 324 0 0 0 chr20 19047743 19047779 -47620226 + (TG)n Simple_repeat Simple_repeat 2 37 0 3003 102 25 2 chr20 19047779 19047859 -47620146 - L1PB1 LINE L1 -371 5780 5703 456 290 29 22 chr20 19047862 19048000 -47620005 - MLT1F LTR MaLR -451 139 1 1646 167 20 31 chr20 19049535 19049828 -47618177 + AluJb SINE Alu 7 296 -16 2091 140 0 0 chr20 19050073 19050380 -47617625 - AluSg SINE Alu -3 307 1 181 284 60 0 chr20 19050519 19050586 -47617419 - L2 LINE L2 -8 3305 3235 1942 126 44 3 chr20 19052853 19053146 -47614859 + AluSx SINE Alu 1 305 -7 234 62 0 0 chr20 19054191 19054223 -47613782 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 1684 168 4 4 chr20 19054223 19054503 -47613502 - AluJb SINE Alu -32 280 1 1670 155 9 76 chr20 19054523 19054840 -47613165 - AluJo SINE Alu -16 296 1 564 291 29 0 chr20 19054842 19055017 -47612988 - MIR SINE MIR -72 190 11 1887 202 72 45 chr20 19055404 19055890 -47612115 + MLT1D LTR MaLR 1 499 -6 1116 189 26 0 chr20 19057300 19057490 -47610515 - MER58A DNA MER1_type 0 224 30 978 200 14 27 chr20 19059438 19059658 -47608347 + L1MC1 LINE L1 6092 6308 -25 1283 37 11 22 chr20 19059673 19060028 -47607977 + (GAAA)n Simple_repeat Simple_repeat 1 351 0 225 304 157 49 chr20 19060422 19060442 -47607563 + MIR SINE MIR 37 53 -209 1482 170 93 61 chr20 19060442 19060819 -47607186 - MLT1B LTR MaLR -1 389 1 225 304 157 49 chr20 19060819 19061002 -47607003 + MIR SINE MIR 53 262 0 319 316 7 33 chr20 19061007 19061159 -47606846 - MIR SINE MIR -113 149 2 504 273 17 6 chr20 19061672 19061848 -47606157 - MER5B DNA MER1_type 0 178 1 1146 171 11 91 chr20 19061870 19062145 -47605860 - MLT1C LTR MaLR -210 257 5 2307 98 10 0 chr20 19062646 19062942 -47605063 + AluSx SINE Alu 1 299 -13 8506 174 25 9 chr20 19063155 19065066 -47602939 + L1PA16 LINE L1 3559 5514 -652 2298 91 0 23 chr20 19065066 19065375 -47602630 + AluSc SINE Alu 1 302 -7 8506 174 25 9 chr20 19065375 19066030 -47601975 + L1PA16 LINE L1 5514 6157 -9 231 228 132 77 chr20 19066467 19066711 -47601294 + L1ME4a LINE L1 5699 5941 -180 234 62 0 0 chr20 19067529 19067561 -47600444 + (CA)n Simple_repeat Simple_repeat 1 32 0 592 278 104 0 chr20 19067569 19067742 -47600263 + LTR16B LTR ERVL 8 198 -266 273 254 0 0 chr20 19067865 19067924 -47600081 + LTR16B LTR ERVL 392 450 -14 336 244 0 23 chr20 19067924 19068055 -47599950 + (TA)n Simple_repeat Simple_repeat 1 128 0 380 252 40 60 chr20 19068494 19068645 -47599360 - LTR67 LTR ERVL -1 556 409 2304 106 3 0 chr20 19069498 19069799 -47598206 + AluSp SINE Alu 1 302 -11 905 109 0 43 chr20 19069909 19070047 -47597958 + FLAM_C SINE Alu 1 132 -11 742 261 93 65 chr20 19071214 19071612 -47596393 - MLT1I LTR MaLR 0 409 1 21 36 0 0 chr20 19072722 19072750 -47595255 + AT_rich Low_complexity Low_complexity 1 28 0 691 182 94 68 chr20 19072869 19073061 -47594944 - MER3 DNA MER1_type -3 206 10 692 257 78 80 chr20 19074211 19074659 -47593346 - MLT1H LTR MaLR -4 545 99 580 224 100 0 chr20 19075641 19075811 -47592194 - MIR SINE MIR 0 262 76 1133 22 29 0 chr20 19075895 19076032 -47591973 + L1PA4 LINE L1 6015 6155 0 22 35 0 0 chr20 19076082 19076111 -47591894 + AT_rich Low_complexity Low_complexity 1 29 0 603 233 94 90 chr20 19076208 19076243 -47591762 - MLT1F LTR MaLR 0 555 522 1806 130 130 33 chr20 19076243 19076574 -47591431 - THE1B LTR MaLR 0 364 2 603 233 94 90 chr20 19076574 19076823 -47591182 - MLT1F LTR MaLR -33 522 270 549 211 18 0 chr20 19076823 19076932 -47591073 + MER54A LTR ERVL 1 111 -790 1425 172 52 99 chr20 19076932 19077315 -47590690 - MLT1A1 LTR MaLR 0 365 1 3760 191 18 3 chr20 19077340 19077963 -47590042 - MLT1A1-int LTR MaLR -12 1723 1092 180 0 0 0 chr20 19077989 19078009 -47589996 + (TTAGGG)n Simple_repeat Simple_repeat 4 23 0 47 61 0 0 chr20 19078960 19079042 -47588963 + AT_rich Low_complexity Low_complexity 1 82 0 423 304 120 14 chr20 19079199 19079416 -47588589 - MIR SINE MIR -1 261 22 271 219 0 0 chr20 19079489 19079553 -47588452 - AluJ/monomer SINE Alu 0 302 239 939 121 0 0 chr20 19079559 19079683 -47588322 - FLAM_C SINE Alu -19 124 1 329 356 124 10 chr20 19080132 19080334 -47587671 - MIR SINE MIR -31 231 7 395 352 6 0 chr20 19081255 19081431 -47586574 + (CA)n Simple_repeat Simple_repeat 2 178 0 445 180 94 39 chr20 19083604 19083732 -47584273 - L1ME4a LINE L1 -258 5863 5729 614 306 61 53 chr20 19083788 19084021 -47583984 + L3 LINE CR1 1165 1406 -171 1960 88 0 0 chr20 19084021 19084317 -47583688 + AluY SINE Alu 39 334 0 614 306 61 53 chr20 19084317 19084457 -47583548 + L3 LINE CR1 1406 1543 -34 23 0 0 0 chr20 19084762 19084785 -47583220 + AT_rich Low_complexity Low_complexity 1 23 0 1302 241 12 25 chr20 19084979 19085299 -47582706 - LTR16C LTR ERVL -1 490 175 889 222 69 9 chr20 19086427 19086643 -47581362 - LTR16C LTR ERVL -10 481 253 370 340 127 5 chr20 19086835 19087032 -47580973 + MIR SINE MIR 36 256 -6 952 236 43 111 chr20 19087730 19088289 -47579716 + MLT1H LTR MaLR 29 549 0 259 281 47 0 chr20 19088364 19088428 -47579577 + MER5A DNA MER1_type 72 138 -51 328 240 58 29 chr20 19088431 19088535 -47579470 + MER5A DNA MER1_type 59 165 -24 222 62 0 0 chr20 19088561 19088593 -47579412 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 213 245 142 66 chr20 19088632 19088738 -47579267 + L2 LINE L2 3192 3305 -8 205 317 109 20 chr20 19089879 19089980 -47578025 - L2 LINE L2 -7 3265 3156 1052 92 0 6 chr20 19090462 19090626 -47577379 + (TGGA)n Simple_repeat Simple_repeat 4 166 0 3190 171 81 23 chr20 19091486 19092102 -47575903 + MLT1E1 LTR MaLR 3 654 0 798 291 42 4 chr20 19092314 19092551 -47575454 + MIR SINE MIR 17 262 0 293 323 11 11 chr20 19092548 19092641 -47575364 - MIR SINE MIR -154 108 16 * 352 242 30 30 chr20 19092789 19092921 -47575084 + LTR16A1 LTR ERVL 320 451 -6 182 250 0 0 chr20 19093429 19093469 -47574536 + MIR SINE MIR 100 139 -69 550 296 56 0 chr20 19094124 19094303 -47573702 - MIR SINE MIR -8 254 66 449 302 125 33 chr20 19094330 19094691 -47573314 + L2 LINE L2 2371 2764 -550 401 286 48 42 chr20 19094847 19095036 -47572969 + L2 LINE L2 3122 3311 -2 210 171 0 0 chr20 19095527 19095562 -47572443 + A-rich Low_complexity Low_complexity 1 35 0 1946 117 3 50 chr20 19096191 19096490 -47571515 + AluSp SINE Alu 1 285 -28 1537 206 20 0 chr20 19096537 19096829 -47571176 + AluJo SINE Alu 1 298 -14 1048 203 66 14 chr20 19096889 19097101 -47570904 + MER58A DNA MER1_type 2 224 0 239 385 82 0 chr20 19097174 19097309 -47570696 + MIR3 SINE MIR 52 197 -11 972 302 125 20 chr20 19097522 19097929 -47570076 - LTR16C LTR ERVL 0 491 42 546 214 81 29 chr20 19097981 19098154 -47569851 - Charlie7 DNA MER1_type 0 2612 2431 2416 140 46 96 chr20 19098167 19098688 -47569317 + L1MB3 LINE L1 5686 6180 -3 274 252 78 39 chr20 19098699 19098802 -47569203 - Charlie7 DNA MER1_type -2501 111 5 272 287 37 59 chr20 19098950 19099086 -47568919 + MIR SINE MIR 28 160 -102 2402 193 62 33 chr20 19099142 19099661 -47568344 - MLT1F LTR MaLR 0 542 9 618 288 90 65 chr20 19099671 19100281 -47567724 - L2 LINE L2 -76 3237 2595 505 179 86 14 chr20 19100962 19101102 -47566903 + MER113 DNA MER1_type? 67 216 -305 2053 254 63 29 chr20 19101657 19102303 -47565702 + L1ME2 LINE L1 5497 6164 0 624 273 51 31 chr20 19102848 19103104 -47564901 - L1ME LINE L1 -329 5792 5532 1072 173 14 43 chr20 19103565 19103773 -47564232 + AluJo SINE Alu 101 302 -10 585 88 8 48 chr20 19103780 19103905 -47564100 + (GGAA)n Simple_repeat Simple_repeat 4 123 0 1657 224 114 11 chr20 19104360 19104815 -47563190 - L1ME1 LINE L1 -19 6147 5646 1034 219 52 64 chr20 19105293 19105681 -47562324 - Tigger8 DNA MER2_type -62 604 222 740 189 0 0 chr20 19105902 19106013 -47561992 + FLAM_A SINE Alu 1 111 -31 236 329 29 15 chr20 19106394 19106531 -47561474 - L2 LINE L2 -2557 757 619 424 305 33 12 chr20 19107353 19107531 -47560474 + MIR SINE MIR 17 197 -61 1327 148 5 28 chr20 19108504 19108720 -47559285 - AluJo SINE Alu -16 296 86 2345 90 0 0 chr20 19109372 19109662 -47558343 - AluSg1 SINE Alu -19 290 1 1879 151 33 30 chr20 19110128 19110432 -47557573 + AluJo SINE Alu 1 305 -7 531 214 20 0 chr20 19110436 19110534 -47557471 - MER5A DNA MER1_type -87 102 3 717 181 19 151 chr20 19110574 19110779 -47557226 + MER5B DNA MER1_type 1 178 0 192 135 54 0 chr20 19110899 19110936 -47557069 + L2 LINE L2 3270 3308 -5 903 296 92 10 chr20 19111228 19111617 -47556388 + MER113 DNA MER1_type? 61 481 -40 745 283 45 18 chr20 19112207 19112430 -47555575 + MIR SINE MIR 18 246 -16 1371 283 31 5 chr20 19112621 19113013 -47554992 - L1MC4a LINE L1 -1873 5935 5534 1181 192 121 42 chr20 19113021 19113094 -47554911 - Charlie4a DNA MER1_type -1502 459 393 2060 204 17 0 chr20 19113094 19113451 -47554554 - MLT1A1 LTR MaLR -2 363 1 1181 192 121 42 chr20 19113451 19113758 -47554247 - Charlie4a DNA MER1_type -1568 393 49 22 35 0 0 chr20 19114070 19114099 -47553906 + AT_rich Low_complexity Low_complexity 1 29 0 1992 116 34 17 chr20 19114269 19114563 -47553442 + AluSx SINE Alu 1 299 -13 2426 75 3 13 chr20 19114563 19114871 -47553134 + AluY SINE Alu 6 310 -1 375 253 28 115 chr20 19115911 19116093 -47551912 - MER91A DNA MER1_type -30 166 1 1087 209 47 5 chr20 19116679 19116894 -47551111 - MER58A DNA MER1_type 0 224 1 261 325 51 25 chr20 19116946 19117103 -47550902 - MIR SINE MIR -22 240 80 447 290 121 0 chr20 19120486 19120610 -47547395 + L2 LINE L2 3134 3272 0 345 312 65 40 chr20 19120640 19120839 -47547166 + L1MEd LINE L1 244 447 -5672 244 324 58 58 chr20 19121992 19122165 -47545840 - MIR SINE MIR -44 218 46 38708 77 19 7 chr20 19123002 19129069 -47538936 + L1PA6 LINE L1 11 6151 -3 420 233 67 83 chr20 19129629 19129822 -47538183 + L1MC5 LINE L1 7740 7929 -32 783 226 59 0 chr20 19130011 19130197 -47537808 - MIR SINE MIR -18 244 48 327 274 88 0 chr20 19132683 19132796 -47535209 + MIR SINE MIR 120 242 -20 294 73 0 0 chr20 19133693 19133734 -47534271 + (A)n Simple_repeat Simple_repeat 1 41 0 277 274 53 9 chr20 19134098 19134211 -47533794 + L1ME3 LINE L1 4007 4124 -2022 433 287 62 3 chr20 19134223 19134512 -47533493 + L1ME3 LINE L1 4403 4708 -1438 223 250 0 0 chr20 19134512 19134564 -47533441 + GA-rich Low_complexity Low_complexity 1 52 0 402 260 117 38 chr20 19134606 19134948 -47533057 + L1ME3 LINE L1 4725 5093 -1053 2649 165 43 10 chr20 19134958 19135444 -47532561 - MER4E LTR ERV1 -28 748 252 514 267 83 27 chr20 19135451 19136157 -47531848 + L1ME3 LINE L1 5086 5888 -282 2389 82 0 0 chr20 19136383 19136676 -47531329 - AluSg SINE Alu -17 293 1 1863 140 46 7 chr20 19136676 19136961 -47531044 - AluSx SINE Alu -16 296 1 24 67 0 0 chr20 19137072 19137117 -47530888 + AT_rich Low_complexity Low_complexity 1 45 0 917 256 114 48 chr20 19137472 19137893 -47530112 - MLT1J2 LTR MaLR 0 450 2 2091 115 55 30 chr20 19137953 19138317 -47529688 + THE1C LTR MaLR 1 373 -2 1594 208 51 58 chr20 19138382 19138849 -47529156 - MLT2C2 LTR ERVL 0 464 1 664 227 148 10 chr20 19138893 19139096 -47528909 + MIR SINE MIR 11 241 -21 1033 235 113 88 chr20 19139466 19139874 -47528131 - MLT1H LTR MaLR -17 532 115 1979 131 7 3 chr20 19140616 19140913 -47527092 + AluJb SINE Alu 15 312 0 816 219 91 30 chr20 19141574 19141839 -47526166 - L1ME3A LINE L1 -1 6169 5889 216 86 0 0 chr20 19142108 19142143 -47525862 + (CAGAGA)n Simple_repeat Simple_repeat 2 36 0 839 257 130 17 chr20 19142925 19143287 -47524718 - LTR16C LTR ERVL 0 491 89 358 226 19 0 chr20 19145671 19145777 -47522228 + CT-rich Low_complexity Low_complexity 1 108 0 634 160 11 27 chr20 19145791 19146145 -47521860 + CT-rich Low_complexity Low_complexity 1 348 0 22 35 0 0 chr20 19146795 19146824 -47521181 + AT_rich Low_complexity Low_complexity 1 29 0 268 349 24 48 chr20 19147114 19147323 -47520682 - L2 LINE L2 -4 3309 3106 423 299 206 16 chr20 19148863 19149247 -47518758 - LTR16B LTR ERVL 0 464 8 671 235 24 0 chr20 19149564 19149730 -47518275 - MLT1G LTR MaLR 0 590 421 22 0 0 0 chr20 19150106 19150128 -47517877 + AT_rich Low_complexity Low_complexity 1 22 0 1187 252 77 19 chr20 19150481 19150898 -47517107 + LTR16A1 LTR ERVL 4 444 -13 1796 152 50 0 chr20 19151024 19151307 -47516698 - AluJb SINE Alu -15 297 1 293 200 14 14 chr20 19151567 19151637 -47516368 - LTR37B LTR ERV1 -258 210 141 246 330 0 0 chr20 19151664 19151752 -47516253 + MER58A DNA MER1_type 1 88 -19 225 325 111 17 chr20 19151948 19152065 -47515940 + MIR SINE MIR 16 143 -65 2232 118 0 3 chr20 19152469 19152765 -47515240 + AluSq SINE Alu 6 300 -13 2145 124 71 42 chr20 19153361 19153715 -47514290 - THE1B LTR MaLR 0 364 1 1889 121 17 75 chr20 19153725 19154072 -47513933 + MLT1C LTR MaLR 1 327 -140 384 162 15 0 chr20 19154179 19154247 -47513758 + MLT1C LTR MaLR 372 440 -27 391 231 179 17 chr20 19154598 19154715 -47513290 - MER63 DNA MER1_type -299 763 2 1104 260 94 44 chr20 19156475 19156909 -47511096 - LTR16C LTR ERVL 0 491 36 629 176 9 9 chr20 19157810 19157918 -47510087 - MER81 DNA DNA -4 110 3 345 328 99 0 chr20 19158325 19158456 -47509549 - MLT1I LTR MaLR -265 144 1 1881 139 0 72 chr20 19158856 19159188 -47508817 + AluSx SINE Alu 1 308 -4 399 266 106 66 chr20 19159235 19159946 -47508059 + L1ME4a LINE L1 5350 6099 -22 659 213 94 25 chr20 19160424 19160626 -47507379 - MER20 DNA MER1_type 0 219 4 1227 142 111 66 chr20 19160779 19161067 -47506938 - AluJo SINE Alu -1 301 1 270 235 211 24 chr20 19161185 19161351 -47506654 + LTR33A LTR ERVL 327 523 0 304 217 0 0 chr20 19161375 19161430 -47506575 + L1MC4 LINE L1 6636 6693 -1349 2237 89 14 0 chr20 19161430 19161711 -47506294 - AluSp SINE Alu -27 286 2 304 217 0 0 chr20 19161711 19161724 -47506281 + L1MC4 LINE L1 6692 6704 -1338 2613 42 7 3 chr20 19161903 19162213 -47505792 - AluY SINE Alu 0 311 1 289 241 51 0 chr20 19162256 19162335 -47505670 + MIR SINE MIR 159 241 -21 1162 186 3 114 chr20 19162491 19162797 -47505208 - MLT1A1 LTR MaLR -93 272 1 1394 246 120 39 chr20 19163130 19163638 -47504367 - MLT1H LTR MaLR 0 549 1 1931 98 148 0 chr20 19163801 19164065 -47503940 - AluSx SINE Alu -9 303 1 202 239 18 37 chr20 19165004 19165113 -47502892 + (TA)n Simple_repeat Simple_repeat 2 108 0 2099 117 27 3 chr20 19167849 19168147 -47499858 + AluSx SINE Alu 1 305 -7 955 258 118 7 chr20 19170097 19170424 -47497581 - LTR16A1 LTR ERVL -19 469 100 225 296 14 14 chr20 19170838 19170909 -47497096 + L3 LINE CR1 1296 1366 -211 411 184 101 9 chr20 19170996 19171105 -47496900 - L1ME3A LINE L1 -5 6165 6047 1786 246 86 0 chr20 19171137 19171568 -47496437 - L1ME3A LINE L1 -311 5859 5392 226 292 10 52 chr20 19171570 19171666 -47496339 + MER5A DNA MER1_type 48 139 -50 554 199 146 82 chr20 19171822 19172089 -47495916 - MLT1J LTR MaLR -4 507 224 186 43 0 0 chr20 19172092 19172115 -47495890 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 231 114 0 0 chr20 19172115 19172150 -47495855 + (GA)n Simple_repeat Simple_repeat 2 36 0 518 262 39 52 chr20 19172161 19172394 -47495611 - MLT1J LTR MaLR -260 251 22 404 271 80 20 chr20 19172732 19172883 -47495122 - MIR SINE MIR -26 236 77 301 269 50 25 chr20 19173246 19173365 -47494640 - MIR3 SINE MIR -5 203 82 1067 60 0 0 chr20 19173698 19173831 -47494174 + L1MA3 LINE L1 6173 6305 0 219 188 47 31 chr20 19173906 19173970 -47494035 - MER5A DNA MER1_type -6 183 119 * 226 272 35 26 chr20 19173924 19174038 -47493967 + MER5B DNA MER1_type 26 140 -38 420 110 122 12 chr20 19174133 19174215 -47493790 + MER5B DNA MER1_type 88 178 0 214 281 98 12 chr20 19174230 19174312 -47493693 - MER5A DNA MER1_type -5 184 96 28 0 0 0 chr20 19174727 19174755 -47493250 + AT_rich Low_complexity Low_complexity 1 28 0 1439 46 14 60 chr20 19175394 19175611 -47492394 - L1PA5 LINE L1 -1 6153 5947 487 247 72 6 chr20 19175790 19175956 -47492049 + MER112 DNA MER1_type 5 181 -79 656 210 19 25 chr20 19175977 19176139 -47491866 - MER5B DNA MER1_type 0 178 18 2090 230 77 13 chr20 19176357 19176966 -47491039 - L1ME3A LINE L1 -72 6098 5451 1896 153 4 4 chr20 19177549 19177854 -47490151 - AluJo SINE Alu 0 305 1 938 244 58 17 chr20 19178000 19178343 -47489662 - L1ME3A LINE L1 -76 6094 5734 952 267 113 3 chr20 19178550 19178861 -47489144 - L1ME2 LINE L1 -9 6155 5811 1470 248 64 15 chr20 19179116 19179588 -47488417 - Charlie4a DNA MER1_type -6 502 8 243 262 196 0 chr20 19179600 19179707 -47488298 + MIR SINE MIR 124 251 -11 431 290 101 42 chr20 19181307 19181524 -47486481 - MIR SINE MIR -21 241 12 287 307 66 25 chr20 19181613 19181744 -47486261 - MIR SINE MIR -69 139 7 786 180 99 6 chr20 19182080 19182252 -47485753 + MER3 DNA MER1_type 18 205 -4 225 320 160 0 chr20 19183113 19183213 -47484792 - MIR3 SINE MIR -14 194 79 451 260 10 0 chr20 19183308 19183408 -47484597 + L2 LINE L2 3211 3311 -2 2300 100 0 0 chr20 19184455 19184744 -47483261 - AluSx SINE Alu -15 297 9 2349 92 3 0 chr20 19184973 19185276 -47482729 - AluSg SINE Alu -6 304 1 233 209 0 81 chr20 19185488 19185574 -47482431 - L1ME4a LINE L1 0 6121 6043 417 206 69 42 chr20 19185986 19186203 -47481802 + LTR16A1 LTR ERVL 4 273 -184 699 249 61 17 chr20 19186867 19187258 -47480747 - LTR16A1 LTR ERVL 0 457 3 870 220 0 41 chr20 19188193 19188411 -47479594 - MER3 DNA MER1_type 0 209 1 192 218 26 13 chr20 19188427 19188505 -47479500 + (TA)n Simple_repeat Simple_repeat 2 80 0 225 0 0 0 chr20 19189197 19189222 -47478783 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 21 0 0 0 chr20 19189252 19189273 -47478732 + AT_rich Low_complexity Low_complexity 1 21 0 2586 55 7 0 chr20 19191403 19191710 -47476295 + AluY SINE Alu 1 309 -2 255 341 16 47 chr20 19191721 19191850 -47476155 - MIR SINE MIR -135 127 3 2666 55 0 0 chr20 19192065 19192374 -47475631 - AluY SINE Alu -2 309 1 807 244 16 5 chr20 19192469 19192662 -47475343 - LTR16C LTR ERVL 0 491 297 258 227 99 116 chr20 19192906 19192984 -47475021 - MIR3 SINE MIR -23 185 107 2353 112 0 3 chr20 19192984 19193297 -47474708 + AluSx SINE Alu 1 312 0 258 227 99 116 chr20 19193297 19193390 -47474615 - MIR3 SINE MIR -101 107 17 189 0 0 0 chr20 19194228 19194249 -47473756 + (A)n Simple_repeat Simple_repeat 1 21 0 333 247 22 34 chr20 19195763 19195852 -47472153 + L1MC4 LINE L1 6616 6703 -1339 755 214 37 81 chr20 19196619 19196738 -47471267 - MER112 DNA MER1_type 0 260 137 396 59 0 0 chr20 19196738 19196789 -47471216 + (AATAG)n Simple_repeat Simple_repeat 2 52 0 755 214 37 81 chr20 19196789 19196940 -47471065 - MER112 DNA MER1_type -123 137 2 508 249 154 71 chr20 19196949 19197349 -47470656 - MLT1J2 LTR MaLR 0 450 1 27 87 0 0 chr20 19197491 19197560 -47470445 + AT_rich Low_complexity Low_complexity 1 69 0 1060 162 6 0 chr20 19197600 19197767 -47470238 + AluJb SINE Alu 134 301 -11 2041 109 19 50 chr20 19199668 19199707 -47468298 - AluSx SINE Alu 0 312 273 222 37 0 0 chr20 19199707 19199734 -47468271 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2041 109 19 50 chr20 19199734 19200016 -47467989 - AluSx SINE Alu -39 273 1 876 222 136 5 chr20 19200176 19200374 -47467631 + MER58A DNA MER1_type 1 224 0 462 320 35 35 chr20 19200474 19200733 -47467272 + LTR16C LTR ERVL 140 398 -93 389 164 125 16 chr20 19200730 19200858 -47467147 - LTR50 LTR ERVL -14 781 640 * 1034 200 216 14 chr20 19201325 19201556 -47466449 - LTR50 LTR ERVL -166 629 446 2308 150 8 3 chr20 19201556 19201917 -47466088 - MLT1A1 LTR MaLR 0 365 3 1034 200 216 14 chr20 19201917 19202130 -47465875 - LTR50 LTR ERVL -349 446 10 258 162 40 27 chr20 19202133 19202207 -47465798 + LTR16C LTR ERVL 408 482 -9 916 282 52 24 chr20 19202686 19203069 -47464936 - LTR16C LTR ERVL 0 491 98 840 301 119 13 chr20 19203678 19204133 -47463872 + L2 LINE L2 2811 3313 0 249 273 0 0 chr20 19204926 19204981 -47463024 + L2 LINE L2 3217 3271 -1 925 261 91 11 chr20 19205107 19205510 -47462495 + LTR16C LTR ERVL 2 489 -2 529 256 85 0 chr20 19207910 19208074 -47459931 - MER45A DNA AcHobo 0 178 1 200 217 0 0 chr20 19209200 19209246 -47458759 + T-rich Low_complexity Low_complexity 1 46 0 258 242 0 0 chr20 19209311 19209377 -47458628 + (TA)n Simple_repeat Simple_repeat 2 67 0 270 281 0 0 chr20 19209377 19209466 -47458539 - L1MC4 LINE L1 -1339 6703 6615 228 152 0 0 chr20 19209469 19209515 -47458490 - LTR66 LTR ERVL -171 439 394 291 191 0 0 chr20 19209515 19209578 -47458427 + (TA)n Simple_repeat Simple_repeat 1 63 0 422 256 45 0 chr20 19209590 19209723 -47458282 + L1MC4 LINE L1 7904 8042 0 616 243 135 46 chr20 19210418 19210677 -47457328 + L2 LINE L2 3032 3313 0 1690 171 16 23 chr20 19211128 19211432 -47456573 - AluJb SINE Alu -10 302 1 2204 111 3 0 chr20 19211535 19211824 -47456181 + AluSx SINE Alu 11 300 -12 2104 197 18 16 chr20 19212212 19212648 -47455357 + Tigger3(Golem) DNA MER2_type 1 437 -2592 241 171 29 14 chr20 19212637 19212707 -47455298 + Tigger3(Golem) DNA MER2_type 2451 2521 -508 * 447 184 51 0 chr20 19212865 19212963 -47455042 - MER5A DNA MER1_type -78 111 9 1994 92 35 0 chr20 19213168 19213428 -47454577 + AluSx SINE Alu 1 269 -43 305 78 39 0 chr20 19213448 19213499 -47454506 + AluSx SINE Alu 246 298 -4 1608 231 117 10 chr20 19214064 19214587 -47453418 + L1MC4a LINE L1 7229 7807 -1 1597 174 10 44 chr20 19214912 19215210 -47452795 - AluJb SINE Alu -19 293 6 512 213 199 0 chr20 19215381 19215522 -47452483 - MIR SINE MIR -45 217 49 214 157 78 20 chr20 19216650 19216701 -47451304 + L2 LINE L2 3121 3174 -98 266 0 29 0 chr20 19216790 19216824 -47451181 + (TTTTTG)n Simple_repeat Simple_repeat 3 37 0 531 224 86 0 chr20 19217142 19217316 -47450689 - MER5A DNA MER1_type 0 189 1 477 217 51 14 chr20 19217622 19217760 -47450245 + MER5A DNA MER1_type 3 145 -44 775 252 132 27 chr20 19217811 19218242 -47449763 + MLT1E2 LTR MaLR 54 552 -73 468 196 104 23 chr20 19218315 19218407 -47449598 + Charlie4 DNA MER1_type 1738 1821 -140 1982 165 0 3 chr20 19218407 19218710 -47449295 - AluJb SINE Alu -10 302 1 468 196 104 23 chr20 19218710 19218790 -47449215 + Charlie4 DNA MER1_type 1821 1924 -37 357 231 31 129 chr20 19219079 19219158 -47448847 + MER112 DNA MER1_type 1 86 -174 306 0 0 0 chr20 19219158 19219192 -47448813 + (TG)n Simple_repeat Simple_repeat 2 35 0 357 231 31 129 chr20 19219192 19219398 -47448607 + MER112 DNA MER1_type 86 258 -2 282 150 24 47 chr20 19219435 19219562 -47448443 + (CA)n Simple_repeat Simple_repeat 1 124 0 1439 198 34 60 chr20 19220954 19221338 -47446667 + MLT1A2 LTR MaLR 1 374 0 315 377 22 0 chr20 19221412 19221550 -47446455 + MIR3 SINE MIR 30 170 -38 317 284 205 0 chr20 19222010 19222137 -47445868 - MER5A DNA MER1_type 0 189 37 198 303 165 37 chr20 19222598 19222707 -47445298 - MER5B DNA MER1_type -53 125 3 814 191 0 0 chr20 19222865 19222996 -47445009 - FLAM_A SINE Alu -2 131 1 1013 219 80 21 chr20 19223305 19223592 -47444413 + L1ME LINE L1 5293 5596 -570 1837 180 0 10 chr20 19224322 19224617 -47443388 + AluJo SINE Alu 3 294 -18 327 244 154 41 chr20 19224662 19224785 -47443220 + MIR SINE MIR 13 149 -113 571 280 104 50 chr20 19224802 19225205 -47442800 + LTR16A1 LTR ERVL 30 454 -3 255 61 0 0 chr20 19225271 19225304 -47442701 + (CAT)n Simple_repeat Simple_repeat 2 34 0 1590 204 103 24 chr20 19225558 19226013 -47441992 - LTR16C LTR ERVL 0 491 1 236 288 45 0 chr20 19226051 19226117 -47441888 - MIR SINE MIR -115 147 79 201 274 160 38 chr20 19226155 19226367 -47441638 + L3 LINE CR1 1166 1403 -174 184 146 49 24 chr20 19226773 19226814 -47441191 + MER5A DNA MER1_type 34 75 -114 * 257 143 41 0 chr20 19226811 19226860 -47441145 - MER5A DNA MER1_type -84 105 55 1155 162 0 68 chr20 19226894 19227128 -47440877 + MER20 DNA MER1_type 2 219 0 2293 100 7 0 chr20 19227932 19228221 -47439784 + AluSp SINE Alu 1 291 -22 21 36 0 0 chr20 19228221 19228249 -47439756 + AT_rich Low_complexity Low_complexity 1 28 0 193 28 0 56 chr20 19229220 19229256 -47438749 + (CAAA)n Simple_repeat Simple_repeat 3 36 0 1548 98 0 0 chr20 19229276 19229469 -47438536 - AluSx SINE Alu -119 193 1 1543 153 18 11 chr20 19229469 19229751 -47438254 - MER33 DNA MER1_type -40 284 1 235 198 198 12 chr20 19230681 19230762 -47437243 - MLT1K LTR MaLR -348 240 145 707 171 55 111 chr20 19231962 19232161 -47435844 + MER5A DNA MER1_type 1 188 -1 205 255 13 67 chr20 19232500 19232649 -47435356 + CT-rich Low_complexity Low_complexity 1 141 0 692 253 77 9 chr20 19233566 19233799 -47434206 - LTR16C LTR ERVL -8 483 235 197 407 28 7 chr20 19234077 19234222 -47433783 + MIR3 SINE MIR 23 170 -38 311 288 50 22 chr20 19234301 19234440 -47433565 + MER113 DNA MER1_type? 22 164 -357 376 227 15 76 chr20 19234632 19234764 -47433241 - MIR SINE MIR -58 204 81 251 250 24 12 chr20 19237244 19237328 -47430677 - MIR SINE MIR -62 200 116 480 244 24 0 chr20 19237405 19237528 -47430477 + LTR16C LTR ERVL 149 274 -217 798 221 31 78 chr20 19237599 19237857 -47430148 + MLT1J LTR MaLR 17 262 -249 23 0 0 0 chr20 19238024 19238047 -47429958 + GC_rich Low_complexity Low_complexity 1 23 0 3890 148 29 24 chr20 19238047 19238770 -47429235 - L1MB3 LINE L1 -12 6171 5445 2487 66 0 3 chr20 19239333 19239634 -47428371 + AluY SINE Alu 3 302 -9 21 36 0 0 chr20 19240126 19240154 -47427851 + AT_rich Low_complexity Low_complexity 1 28 0 243 0 0 0 chr20 19240950 19240977 -47427028 + (TG)n Simple_repeat Simple_repeat 1 27 0 2177 102 0 11 chr20 19240977 19241261 -47426744 - AluSx SINE Alu -31 281 1 225 273 172 0 chr20 19241285 19241384 -47426621 - L1MC4a LINE L1 -1688 6120 6005 234 81 0 0 chr20 19241394 19241431 -47426574 + (TG)n Simple_repeat Simple_repeat 2 38 0 440 248 131 0 chr20 19241504 19241657 -47426348 - L1MC4a LINE L1 -1986 5822 5650 251 349 28 0 chr20 19241729 19241835 -47426170 - L1MC4a LINE L1 -2126 5682 5574 641 172 179 0 chr20 19241947 19242081 -47425924 - MER5A DNA MER1_type -28 161 4 286 272 9 29 chr20 19242163 19242273 -47425732 + MIR SINE MIR 46 152 -67 1499 186 38 22 chr20 19242293 19242610 -47425395 + L1ME2 LINE L1 5841 6162 -2 24 0 0 0 chr20 19243224 19243248 -47424757 + GC_rich Low_complexity Low_complexity 1 24 0 2384 68 27 0 chr20 19244026 19244320 -47423685 + AluSx SINE Alu 11 312 0 24 67 0 0 chr20 19244340 19244385 -47423620 + AT_rich Low_complexity Low_complexity 1 45 0 436 113 0 0 chr20 19244385 19244447 -47423558 - FLAM SINE Alu -27 116 55 27 0 0 0 chr20 19244551 19244578 -47423427 + AT_rich Low_complexity Low_complexity 1 27 0 692 161 7 54 chr20 19244955 19245104 -47422901 + FLAM_C SINE Alu 2 143 0 367 199 11 24 chr20 19245460 19245550 -47422455 - MLT1I LTR MaLR -265 144 72 327 214 67 22 chr20 19245893 19245982 -47422023 - MLT1I LTR MaLR -315 94 2 409 298 44 0 chr20 19246290 19246404 -47421601 - MER94 DNA DNA 0 134 16 1362 214 46 108 chr20 19246434 19246623 -47421382 + L1MC4 LINE L1 7473 7672 -370 2165 121 3 7 chr20 19246623 19246929 -47421076 + AluSx SINE Alu 1 305 -7 1362 214 46 108 chr20 19246929 19247134 -47420871 + L1MC4 LINE L1 7672 7820 -222 2176 116 0 7 chr20 19247134 19247428 -47420577 + AluSc SINE Alu 1 292 -17 1362 214 46 108 chr20 19247428 19247635 -47420370 + L1MC4 LINE L1 7820 8038 -4 669 188 0 8 chr20 19247807 19247962 -47420043 - FLAM_C SINE Alu 0 155 2 1703 167 67 0 chr20 19248154 19248436 -47419569 + AluJb SINE Alu 1 301 -11 216 266 255 0 chr20 19248678 19248772 -47419233 + MIR3 SINE MIR 66 183 -25 617 190 132 0 chr20 19248772 19248893 -47419112 + MLT1B LTR MaLR 1 137 -253 311 87 22 0 chr20 19248889 19248935 -47419070 + MLT1B LTR MaLR 344 390 0 * 239 258 32 0 chr20 19249468 19249530 -47418475 + MER90 LTR ERV1 512 575 0 532 228 32 150 chr20 19249530 19249721 -47418284 + L1MC4 LINE L1 7625 7728 -314 1975 164 0 10 chr20 19249721 19250033 -47417972 + AluJb SINE Alu 1 309 -3 532 228 32 150 chr20 19250033 19250315 -47417690 + L1MC4 LINE L1 7728 8042 0 1670 188 13 7 chr20 19250988 19251297 -47416708 - AluJo SINE Alu -1 311 1 1577 152 0 70 chr20 19251379 19251681 -47416324 + AluJb SINE Alu 30 310 -2 453 240 0 62 chr20 19252514 19252660 -47415345 + LTR33 LTR ERVL 24 160 -361 364 233 0 44 chr20 19252717 19252807 -47415198 + LTR33 LTR ERVL 329 414 -107 1019 179 0 0 chr20 19252929 19253097 -47414908 + FAM SINE Alu 1 168 -7 554 261 43 72 chr20 19254011 19254193 -47413812 - MER63A DNA MER1_type -1478 210 33 1715 186 0 29 chr20 19254193 19254500 -47413505 + AluJo SINE Alu 1 298 -14 554 261 43 72 chr20 19254500 19254524 -47413481 - MER63A DNA MER1_type -1655 33 10 21 0 0 0 chr20 19254740 19254761 -47413244 + AT_rich Low_complexity Low_complexity 1 21 0 394 321 192 0 chr20 19255679 19255872 -47412133 + MIR SINE MIR 33 262 0 1284 218 37 3 chr20 19255906 19256204 -47411801 - LTR16C LTR ERVL -1 490 183 2776 128 58 5 chr20 19256925 19257355 -47410650 - LTR35 LTR ERV1 -2 616 164 397 184 26 26 chr20 19257362 19257414 -47410591 + AluJ/FLAM SINE Alu 1 52 -250 3459 165 2 4 chr20 19257414 19257958 -47410047 + MER41D LTR ERV1 1 543 -14 1494 166 40 146 chr20 19257958 19258304 -47409701 - THE1C LTR MaLR 0 375 -6 2149 129 0 10 chr20 19258304 19258614 -47409391 + AluSx SINE Alu 1 307 -5 1494 166 40 146 chr20 19258614 19258629 -47409376 - THE1C LTR MaLR -381 4294967290 36 2413 89 0 10 chr20 19258629 19258933 -47409072 + AluSg SINE Alu 1 301 -9 1494 166 40 146 chr20 19258933 19258967 -47409038 - THE1C LTR MaLR -338 37 1 438 218 0 0 chr20 19258986 19259064 -47408941 + AluJb SINE Alu 49 126 -186 201 192 0 19 chr20 19259064 19259116 -47408889 + (TAAA)n Simple_repeat Simple_repeat 1 51 0 525 322 94 8 chr20 19259151 19259396 -47408609 - MER66-int LTR ERV1 -1 6675 6410 2009 131 3 55 chr20 19259605 19259934 -47408071 - AluSx SINE Alu 0 312 1 3115 146 105 41 chr20 19259997 19260662 -47407343 - MER66-int LTR ERV1 -621 5710 5003 243 0 0 0 chr20 19260682 19260709 -47407296 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1839 165 0 11 chr20 19260712 19260991 -47407014 - AluJo SINE Alu -31 281 6 2454 110 40 77 chr20 19261135 19261440 -47406565 - MSTA LTR MaLR 0 428 142 2075 129 0 3 chr20 19261440 19261734 -47406271 + AluSx SINE Alu 3 295 -17 2454 110 40 77 chr20 19261734 19261872 -47406133 - MSTA LTR MaLR -286 142 1 374 234 86 91 chr20 19261999 19262014 -47405991 - MLT1J LTR MaLR -75 436 422 3024 185 14 23 chr20 19262014 19262348 -47405657 - MER41D LTR ERV1 0 557 229 2399 84 0 26 chr20 19262348 19262658 -47405347 - AluSq SINE Alu -11 302 1 3024 185 14 23 chr20 19262658 19262885 -47405120 - MER41D LTR ERV1 -328 229 1 374 234 86 91 chr20 19262885 19262996 -47405009 - MLT1J LTR MaLR -89 422 309 2493 157 36 0 chr20 19262996 19263409 -47404596 - MSTA LTR MaLR 0 428 1 374 234 86 91 chr20 19263409 19263456 -47404549 - MLT1J LTR MaLR -202 309 263 3174 253 77 17 chr20 19263495 19263586 -47404419 - L2 LINE L2 0 3313 3229 2350 112 0 6 chr20 19263586 19263900 -47404105 + AluSq SINE Alu 1 312 -1 3174 253 77 17 chr20 19263900 19265195 -47402810 - L2 LINE L2 -84 3229 1854 552 260 56 56 chr20 19265318 19265587 -47402418 - L2 LINE L2 -9 3304 3036 350 278 0 0 chr20 19265665 19265755 -47402250 - L1MC4 LINE L1 -1339 6703 6614 348 324 85 42 chr20 19265892 19266410 -47401595 + L1M4 LINE L1 3343 3882 -2264 557 258 114 73 chr20 19266595 19266901 -47401104 + L1M4 LINE L1 4112 4404 -1742 1922 138 47 7 chr20 19266901 19267199 -47400806 + AluJo SINE Alu 1 310 -2 557 258 114 73 chr20 19267199 19267255 -47400750 + L1M4 LINE L1 4404 4456 -1690 2126 138 0 0 chr20 19267255 19267566 -47400439 + AluSx SINE Alu 1 311 -1 557 258 114 73 chr20 19267566 19268055 -47399950 + L1M4 LINE L1 4456 4999 -1147 1892 148 19 13 chr20 19268105 19268415 -47399590 + AluJo SINE Alu 1 312 0 188 57 0 57 chr20 19268433 19268468 -47399537 + (TCTA)n Simple_repeat Simple_repeat 3 35 0 28 0 0 0 chr20 19268627 19268655 -47399350 + AT_rich Low_complexity Low_complexity 1 28 0 228 35 0 0 chr20 19271121 19271150 -47396855 + (CAA)n Simple_repeat Simple_repeat 2 30 0 253 288 101 36 chr20 19271308 19271447 -47396558 - MIR3 SINE MIR -21 187 40 1886 106 82 64 chr20 19271448 19271778 -47396227 + MER1B DNA MER1_type 1 336 -1 184 313 0 45 chr20 19272385 19272452 -47395553 + L2 LINE L2 3189 3252 -20 2178 119 0 3 chr20 19273101 19273403 -47394602 + AluY SINE Alu 1 301 -10 2220 109 0 10 chr20 19273800 19274102 -47393903 - AluSg SINE Alu -9 301 3 2400 74 7 10 chr20 19274130 19274440 -47393565 + AluSg SINE Alu 1 309 -1 815 209 79 23 chr20 19275011 19275188 -47392817 + MLT1J LTR MaLR 1 187 -324 356 123 0 15 chr20 19275232 19275297 -47392708 + (TCCC)n Simple_repeat Simple_repeat 4 67 0 1422 108 46 0 chr20 19275320 19275515 -47392490 - AluSx SINE Alu -98 214 11 1244 164 0 23 chr20 19275573 19275792 -47392213 + AluJo SINE Alu 90 303 -9 1691 163 51 10 chr20 19275935 19276052 -47391953 + AluJb SINE Alu 1 112 -200 285 89 0 0 chr20 19276052 19276097 -47391908 + (CA)n Simple_repeat Simple_repeat 2 46 0 1691 163 51 10 chr20 19276097 19276273 -47391732 + AluJb SINE Alu 112 306 -6 2284 116 0 0 chr20 19276470 19276772 -47391233 - AluSx SINE Alu -9 303 2 251 87 348 0 chr20 19276773 19276819 -47391186 - L1ME2 LINE L1 -34 6130 6069 691 88 0 0 chr20 19276819 19276910 -47391095 - AluSg/x SINE Alu -15 297 207 412 245 31 50 chr20 19276910 19277069 -47390936 - L1ME2 LINE L1 -82 6082 5927 618 282 97 26 chr20 19277121 19277472 -47390533 + L1ME4a LINE L1 5531 5906 -215 2452 92 0 0 chr20 19277720 19278025 -47389980 + AluSx SINE Alu 1 305 -7 2034 149 24 35 chr20 19278331 19278548 -47389457 - MLT1A1 LTR MaLR 0 365 152 2209 108 0 0 chr20 19278548 19278836 -47389169 - AluSg1 SINE Alu -21 288 1 2034 149 24 35 chr20 19278836 19278987 -47389018 - MLT1A1 LTR MaLR -213 152 1 230 245 75 0 chr20 19279163 19279216 -47388789 - L2 LINE L2 -1 3312 3256 188 344 0 0 chr20 19279398 19279459 -47388546 + MER5A DNA MER1_type 122 182 -7 2347 83 3 7 chr20 19279462 19279762 -47388243 + AluSp SINE Alu 1 299 -14 206 269 77 54 chr20 19280089 19280219 -47387786 - L2 LINE L2 -547 2767 2635 665 230 67 0 chr20 19280367 19280532 -47387473 + MER5A DNA MER1_type 14 189 0 361 243 16 65 chr20 19281338 19281523 -47386482 + CT-rich Low_complexity Low_complexity 3 178 0 * 462 272 0 43 chr20 19281385 19281569 -47386436 + C-rich Low_complexity Low_complexity 5 180 0 21 71 0 0 chr20 19283415 19283457 -47384548 + AT_rich Low_complexity Low_complexity 1 42 0 188 261 23 68 chr20 19284544 19284632 -47383373 - MIR SINE MIR -83 179 96 392 191 0 0 chr20 19284847 19284915 -47383090 - MER92C LTR ERV1 -2 552 485 * 632 216 36 22 chr20 19284903 19285042 -47382963 - MER92B LTR ERV1 -486 150 10 367 238 144 64 chr20 19285237 19285677 -47382328 - L1ME2 LINE L1 -328 5842 5366 21 0 0 0 chr20 19285780 19285801 -47382204 + AT_rich Low_complexity Low_complexity 1 21 0 1467 202 3 14 chr20 19285802 19286099 -47381906 + AluJo SINE Alu 1 294 -18 311 135 40 27 chr20 19286389 19286463 -47381542 + L1MC2 LINE L1 6256 6330 -14 1334 77 0 0 chr20 19286463 19286632 -47381373 + AluSg/x SINE Alu 134 302 -8 1393 173 116 7 chr20 19286679 19287024 -47380981 - AluJo SINE Alu 0 380 6 847 172 11 28 chr20 19287349 19287529 -47380476 - AluJb SINE Alu -14 298 122 27 0 0 0 chr20 19287555 19287582 -47380423 + AT_rich Low_complexity Low_complexity 1 27 0 882 106 0 8 chr20 19287589 19287712 -47380293 - AluJb SINE Alu -190 122 1 430 164 0 0 chr20 19288164 19288231 -47379774 - 7SK RNA RNA -6 187 121 848 118 0 16 chr20 19288267 19288394 -47379611 - 7SK RNA RNA -68 125 1 1662 136 139 0 chr20 19288801 19289118 -47378887 + MER46B DNA MER2_type 1 236 0 1466 106 10 0 chr20 19289255 19289463 -47378542 + AluSp SINE Alu 86 295 -18 943 159 291 3 chr20 19289508 19289803 -47378202 - Charlie5 DNA MER1_type 0 2624 2245 652 126 54 9 chr20 19289814 19289925 -47378080 - Charlie5 DNA MER1_type -2489 123 8 2074 116 3 3 chr20 19290563 19290866 -47377139 + AluSp SINE Alu 1 303 -10 650 219 73 101 chr20 19290977 19291177 -47376828 + MIR SINE MIR 18 211 -51 1517 176 0 40 chr20 19291177 19291478 -47376527 + AluJo SINE Alu 1 289 -23 650 219 73 101 chr20 19291478 19291524 -47376481 + MIR SINE MIR 211 257 -5 946 282 118 62 chr20 19292166 19292350 -47375655 - L2 LINE L2 -2 3311 3139 2289 77 3 3 chr20 19292350 19292648 -47375357 + AluSq SINE Alu 1 298 -15 946 282 118 62 chr20 19292648 19293083 -47374922 - L2 LINE L2 -174 3139 2615 1545 182 7 13 chr20 19293083 19293385 -47374620 + AluJo SINE Alu 1 300 -12 946 282 118 62 chr20 19293385 19293600 -47374405 - L2 LINE L2 -698 2615 2413 503 260 46 73 chr20 19293848 19293962 -47374043 - L2 LINE L2 -2 3311 3204 2094 100 3 10 chr20 19293962 19294263 -47373742 - AluSg SINE Alu -11 299 1 503 260 46 73 chr20 19294263 19294367 -47373638 - L2 LINE L2 -109 3204 3099 4490 173 42 34 chr20 19294455 19295616 -47372389 + L1MB7 LINE L1 4860 6022 -162 1689 176 16 10 chr20 19295616 19295923 -47372082 - AluJb SINE Alu -3 309 1 4490 173 42 34 chr20 19295923 19296065 -47371940 + L1MB7 LINE L1 6022 6161 -23 2390 60 0 7 chr20 19296253 19296553 -47371452 + AluSp SINE Alu 2 299 -14 416 314 19 19 chr20 19296668 19296878 -47371127 - L1ME4a LINE L1 -196 5925 5716 458 180 0 81 chr20 19296881 19296992 -47371013 - L1ME4a LINE L1 -457 5664 5563 772 185 198 88 chr20 19297444 19297807 -47370198 - L1ME1 LINE L1 -79 6087 5790 180 97 0 0 chr20 19297826 19297857 -47370148 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 303 191 53 96 chr20 19297864 19297958 -47370047 - LTR9B LTR ERV1 -89 555 466 648 133 275 0 chr20 19298095 19298215 -47369790 + Tigger1 DNA MER2_type 2266 2418 0 361 240 20 20 chr20 19298702 19298802 -47369203 - MIR SINE MIR -91 171 72 23 0 0 0 chr20 19299084 19299107 -47368898 + AT_rich Low_complexity Low_complexity 1 23 0 945 145 26 0 chr20 19299162 19299314 -47368691 - AluJb SINE Alu -23 289 134 461 252 43 0 chr20 19299744 19299859 -47368146 - MER3 DNA MER1_type -60 149 30 * 1691 125 66 7 chr20 19299849 19300137 -47367868 + MER4C LTR ERV1 161 465 0 1291 137 31 9 chr20 19300137 19300363 -47367642 + MER4D LTR ERV1 609 839 -33 2374 51 0 10 chr20 19300384 19300676 -47367329 + AluY SINE Alu 1 289 -22 271 150 0 0 chr20 19300677 19300717 -47367288 - MER3 DNA MER1_type -167 42 3 374 234 146 15 chr20 19300834 19300971 -47367034 - HAL1 LINE L1 -2021 486 332 1928 116 28 0 chr20 19301104 19301389 -47366616 - AluSx SINE Alu -19 293 1 26 0 0 0 chr20 19301761 19301787 -47366218 + AT_rich Low_complexity Low_complexity 1 26 0 1905 121 4 7 chr20 19302709 19302990 -47365015 + AluJo SINE Alu 1 280 -32 383 168 120 88 chr20 19303203 19303328 -47364677 + Charlie4 DNA MER1_type 1818 1946 -15 332 267 276 0 chr20 19303483 19303599 -47364406 + MER5A DNA MER1_type 42 189 0 329 265 61 31 chr20 19303599 19303697 -47364308 - MIR3 SINE MIR -48 160 60 2060 121 0 13 chr20 19304028 19304333 -47363672 + AluJb SINE Alu 1 301 -11 227 357 74 22 chr20 19304648 19304917 -47363088 + L2 LINE L2 2466 2748 -566 349 289 147 31 chr20 19305451 19305681 -47362324 - L2 LINE L2 -224 3048 2763 1674 164 3 11 chr20 19305681 19306004 -47362001 + AluJo SINE Alu 1 321 0 349 289 147 31 chr20 19306004 19306074 -47361931 - L2 LINE L2 -509 2763 2703 304 226 48 12 chr20 19306139 19306223 -47361782 - MLT1J2 LTR MaLR -21 429 343 21 82 0 0 chr20 19306297 19306346 -47361659 + AT_rich Low_complexity Low_complexity 1 49 0 388 213 33 109 chr20 19306396 19306579 -47361426 - MLT1J2 LTR MaLR -274 176 8 392 313 240 21 chr20 19306591 19306978 -47361027 - L2 LINE L2 -679 2635 2164 258 335 126 6 chr20 19307189 19307356 -47360649 + L2 LINE L2 1386 1572 -1742 718 132 0 0 chr20 19307413 19307519 -47360486 + AluSp/q SINE Alu 193 298 -15 601 249 254 0 chr20 19307523 19307700 -47360305 + MIR SINE MIR 31 252 -10 251 319 112 12 chr20 19307946 19308115 -47359890 + L2 LINE L2 1912 2097 -1217 639 204 15 7 chr20 19309349 19309486 -47358519 - L1PB4 LINE L1 0 6156 6019 288 181 55 0 chr20 19309495 19309572 -47358433 - L1PB4 LINE L1 -171 5985 5901 4605 158 39 30 chr20 19309575 19310546 -47357459 - L1MB7 LINE L1 -9 6175 5191 563 229 25 0 chr20 19310661 19310779 -47357226 - FLAM_C SINE Alu -12 121 1 1354 132 40 16 chr20 19310813 19311032 -47356973 + L1MB8 LINE L1 5603 5830 -348 740 270 0 0 chr20 19311032 19311191 -47356814 + FAM SINE Alu 2 160 -15 1354 132 40 16 chr20 19311191 19311222 -47356783 + L1MB8 LINE L1 5830 5859 -319 994 180 82 16 chr20 19313394 19313588 -47354417 - MER3 DNA MER1_type -1 208 2 389 326 15 38 chr20 19314158 19314290 -47353715 - L2 LINE L2 -18 3254 3126 2030 95 31 17 chr20 19314630 19314924 -47353081 + AluSc SINE Alu 2 299 -10 1061 186 5 15 chr20 19315186 19315385 -47352620 + MER6B DNA MER2_type 14 210 0 317 225 96 20 chr20 19317141 19317246 -47350759 + MIR3 SINE MIR 44 156 -52 2179 89 3 20 chr20 19317705 19318007 -47349998 + AluSq SINE Alu 1 297 -16 822 259 65 60 chr20 19318427 19318824 -47349181 - L1ME3A LINE L1 -1 6169 5771 1667 143 49 7 chr20 19320232 19320518 -47347487 + AluJo SINE Alu 1 298 -14 22 70 0 0 chr20 19320595 19320638 -47347367 + AT_rich Low_complexity Low_complexity 1 43 0 1184 102 161 5 chr20 19320732 19320937 -47347068 + MER7A DNA MER2_type 39 273 -73 854 195 0 0 chr20 19321095 19321254 -47346751 - FRAM SINE Alu -19 157 1 248 270 48 0 chr20 19321549 19321612 -47346393 + MER5A DNA MER1_type 117 182 -7 415 283 131 7 chr20 19322207 19322352 -47345653 - MIR3 SINE MIR -29 179 17 424 244 31 13 chr20 19329682 19329800 -47338205 - Charlie8 DNA MER1_type -2285 132 14 1060 208 19 0 chr20 19330887 19331103 -47336902 - AluJo SINE Alu -92 220 1 226 290 89 48 chr20 19334985 19335109 -47332896 + MIR3 SINE MIR 74 202 -6 2076 122 0 0 chr20 19335534 19335829 -47332176 + AluSx SINE Alu 1 295 -17 285 267 60 0 chr20 19337106 19337222 -47330783 + MLT1K LTR MaLR 151 273 -315 346 286 131 50 chr20 19339930 19340227 -47327778 + L2 LINE L2 2053 2373 -941 406 270 101 0 chr20 19340735 19340883 -47327122 + MER58B DNA MER1_type 171 333 -8 260 232 158 0 chr20 19340886 19340981 -47327024 + MER58B DNA MER1_type 220 329 -12 444 122 14 0 chr20 19342317 19342391 -47325614 + MER116 DNA Mariner 1 75 -5 573 288 123 28 chr20 19343845 19344057 -47323948 - MIR SINE MIR -17 245 14 845 307 17 8 chr20 19344922 19345163 -47322842 + MIR SINE MIR 20 262 0 237 324 122 22 chr20 19349772 19349911 -47318094 - MIR SINE MIR -63 199 47 2348 81 3 3 chr20 19351496 19351805 -47316200 + AluSp SINE Alu 1 309 -4 1392 207 24 54 chr20 19356555 19356889 -47311116 + MER33 DNA MER1_type 1 324 0 319 311 34 62 chr20 19358054 19358263 -47309742 - Charlie8 DNA MER1_type -2199 218 16 812 278 74 0 chr20 19358275 19358505 -47309500 + MIR SINE MIR 2 248 -14 196 304 130 43 chr20 19361223 19361338 -47306667 + MIR SINE MIR 64 188 -74 268 267 35 0 chr20 19362060 19362146 -47305859 - L1ME4a LINE L1 -34 6087 5999 461 297 167 7 chr20 19363180 19363480 -47304525 + L1ME4a LINE L1 5547 5894 -227 1021 194 24 29 chr20 19364081 19364287 -47303718 + MER3 DNA MER1_type 5 209 0 2329 90 7 0 chr20 19365438 19365739 -47302266 + AluSx SINE Alu 1 303 -9 604 141 148 39 chr20 19367072 19367200 -47300805 - FLAM_C SINE Alu -1 142 1 316 328 104 0 chr20 19367533 19367658 -47300347 - L1ME4a LINE L1 -448 5673 5536 24 32 0 0 chr20 19367658 19367689 -47300316 + AT_rich Low_complexity Low_complexity 1 31 0 443 221 57 64 chr20 19367780 19367920 -47300085 + MER5A DNA MER1_type 16 154 -35 465 122 61 0 chr20 19369438 19369536 -47298469 + GA-rich Low_complexity Low_complexity 2 105 0 357 189 18 140 chr20 19370236 19370400 -47297605 + MLT1H LTR MaLR 406 549 0 239 295 0 0 chr20 19372158 19372219 -47295786 + CT-rich Low_complexity Low_complexity 3 63 0 238 293 160 33 chr20 19372787 19372999 -47295006 - Charlie8 DNA MER1_type -2141 276 38 2425 52 0 19 chr20 19373864 19374174 -47293831 + AluY SINE Alu 1 304 -7 815 169 0 22 chr20 19374777 19374913 -47293092 + FLAM_C SINE Alu 1 133 0 2696 173 89 2 chr20 19375823 19376327 -47291678 - MER44D DNA MER2_type 0 605 3 382 303 12 74 chr20 19376831 19376993 -47291012 - L1ME4a LINE L1 -42 6079 5928 341 332 132 26 chr20 19377115 19377253 -47290752 - L1ME3A LINE L1 -194 5959 5837 1532 114 0 5 chr20 19377253 19377472 -47290533 - AluSg/x SINE Alu -10 300 83 341 332 132 26 chr20 19377472 19377598 -47290407 - L1ME3A LINE L1 -316 5837 5667 444 353 133 8 chr20 19377693 19377948 -47290057 - L1ME3A LINE L1 -1096 5033 4747 476 334 111 34 chr20 19377962 19378109 -47289896 - L1ME3A LINE L1 -1522 4607 4473 784 183 8 0 chr20 19378109 19378240 -47289765 + FLAM_A SINE Alu 1 132 -1 476 334 111 34 chr20 19378240 19379113 -47288892 - L1ME3A LINE L1 -1656 4473 3509 325 312 65 0 chr20 19379253 19379423 -47288582 - L1ME3A LINE L1 -3006 3123 2943 311 330 104 18 chr20 19379677 19380137 -47287868 - L1MEd LINE L1 -4671 1639 1096 340 311 51 25 chr20 19380218 19380414 -47287591 - L1MEd LINE L1 -5357 762 562 457 324 70 50 chr20 19380435 19380877 -47287128 - L1MEd LINE L1 -5643 476 26 891 293 150 20 chr20 19381549 19382294 -47285711 - L1M4 LINE L1 -1699 4447 3606 500 301 92 0 chr20 19382755 19383037 -47284968 - L1MEd LINE L1 -4917 1202 895 1734 242 113 15 chr20 19384439 19385025 -47282980 + L1ME3A LINE L1 5528 6170 0 2368 93 3 0 chr20 19385291 19385591 -47282414 - AluSx SINE Alu -11 301 1 2137 73 28 10 chr20 19386365 19386653 -47281352 + AluY SINE Alu 1 293 -18 764 255 210 30 chr20 19387237 19387809 -47280196 - L2 LINE L2 -1 3312 2558 1645 201 10 7 chr20 19387809 19388108 -47279897 + AluJb SINE Alu 1 300 -12 764 255 210 30 chr20 19388108 19388327 -47279678 - L2 LINE L2 -755 2558 2380 287 177 32 32 chr20 19388284 19388346 -47279659 - MIR SINE MIR -64 144 83 * 234 284 168 13 chr20 19388475 19388630 -47279375 - MER102b DNA MER1_type -31 310 132 2026 156 10 0 chr20 19388630 19388931 -47279074 - AluJb SINE Alu -8 304 1 2431 103 3 0 chr20 19389441 19389753 -47278252 + AluSq SINE Alu 1 313 0 299 213 0 0 chr20 19390385 19390446 -47277559 + MER116 DNA Mariner 19 79 -1 820 182 155 0 chr20 19390508 19390689 -47277316 + MER3 DNA MER1_type 1 209 0 213 200 153 35 chr20 19391207 19391292 -47276713 - L2 LINE L2 -12 3301 3207 199 344 102 8 chr20 19392492 19392620 -47275385 - MIR SINE MIR -88 174 35 21 0 0 0 chr20 19392973 19392994 -47275011 + GC_rich Low_complexity Low_complexity 1 21 0 37 39 0 0 chr20 19393076 19393127 -47274878 + GC_rich Low_complexity Low_complexity 1 51 0 31 96 0 0 chr20 19393288 19393382 -47274623 + GC_rich Low_complexity Low_complexity 1 94 0 180 0 0 0 chr20 19393519 19393539 -47274466 + (CCCCG)n Simple_repeat Simple_repeat 3 22 0 38 39 0 0 chr20 19393763 19393815 -47274190 + GC_rich Low_complexity Low_complexity 1 52 0 206 147 59 29 chr20 19393832 19393900 -47274105 + (CCCGG)n Simple_repeat Simple_repeat 4 73 0 277 228 40 20 chr20 19394326 19394427 -47273578 + (CGGGG)n Simple_repeat Simple_repeat 2 104 0 276 30 0 0 chr20 19395673 19395706 -47272299 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 186 309 75 43 chr20 19395810 19395904 -47272101 + L2 LINE L2 3211 3307 -6 539 268 66 5 chr20 19395919 19396132 -47271873 - LTR16C LTR ERVL -98 393 168 263 227 187 0 chr20 19397023 19397098 -47270907 + FRAM/FAM SINE Alu 1 86 -80 552 140 0 0 chr20 19397103 19397196 -47270809 + (GGAGAA)n Simple_repeat Simple_repeat 5 97 0 392 217 124 31 chr20 19397336 19397465 -47270540 + L1ME1 LINE L1 6021 6161 -5 716 239 36 9 chr20 19397738 19397954 -47270051 - MIR SINE MIR -1 261 39 294 303 82 81 chr20 19398104 19398626 -47269379 - L2 LINE L2 -662 2652 2130 464 200 64 71 chr20 19398658 19398798 -47269207 - MLT1H LTR MaLR 0 549 404 315 312 114 30 chr20 19399040 19399303 -47268702 - L2 LINE L2 -1223 2091 1807 1022 287 76 40 chr20 19399313 19399996 -47268009 - L2 LINE L2 0 3313 2593 2065 174 42 28 chr20 19399997 19400423 -47267582 + MER63B DNA MER1_type 4 435 -1 273 98 0 0 chr20 19400453 19400494 -47267511 + (TG)n Simple_repeat Simple_repeat 1 41 0 1239 260 178 5 chr20 19400715 19401126 -47266879 - LTR16C LTR ERVL -9 482 1 2152 142 0 3 chr20 19401228 19401538 -47266467 + AluSx SINE Alu 1 309 -3 250 298 152 39 chr20 19401919 19402097 -47265908 - MIR SINE MIR 0 262 65 192 355 65 7 chr20 19402482 19402620 -47265385 - L3 LINE CR1 0 1577 1432 455 328 8 0 chr20 19402670 19402795 -47265210 - L2 LINE L2 0 3313 3188 254 287 55 152 chr20 19403551 19403840 -47264165 - L3b LINE CR1 -197 1386 1126 21 0 0 0 chr20 19403912 19403933 -47264072 + AT_rich Low_complexity Low_complexity 1 21 0 237 33 0 0 chr20 19404274 19404304 -47263701 + (TG)n Simple_repeat Simple_repeat 1 30 0 1951 159 10 0 chr20 19404504 19404800 -47263205 - AluSx SINE Alu -13 299 1 340 222 125 21 chr20 19404874 19405018 -47262987 - L1ME4a LINE L1 0 6121 5963 766 286 172 15 chr20 19405976 19406388 -47261617 - L2 LINE L2 -1 3312 2836 2028 156 0 9 chr20 19406490 19406805 -47261200 - AluJb SINE Alu 0 312 1 346 266 65 41 chr20 19406840 19406986 -47261019 - MIR3 SINE MIR -45 163 11 1775 135 54 24 chr20 19407056 19407353 -47260652 + AluJb SINE Alu 1 306 -6 240 235 25 25 chr20 19407386 19407467 -47260538 - L1ME4a LINE L1 -73 6048 5968 180 0 0 0 chr20 19407485 19407505 -47260500 + (TG)n Simple_repeat Simple_repeat 2 21 0 1820 212 33 29 chr20 19407562 19408047 -47259958 - L1ME2 LINE L1 -9 6155 5669 835 193 0 0 chr20 19408048 19408188 -47259817 - FLAM_C SINE Alu -3 140 1 1236 168 99 8 chr20 19408193 19408455 -47259550 - L1ME2 LINE L1 -494 5670 5385 279 79 0 0 chr20 19408830 19408868 -47259137 + (ATG)n Simple_repeat Simple_repeat 1 38 0 1537 236 69 22 chr20 19409456 19409625 -47258380 - LTR16C LTR ERVL -1 490 331 2121 172 63 29 chr20 19409625 19409806 -47258199 + MSTB LTR MaLR 1 174 -252 2293 114 0 9 chr20 19409806 19410121 -47257884 + AluSq SINE Alu 1 312 -1 2121 172 63 29 chr20 19410121 19410351 -47257654 + MSTB LTR MaLR 174 426 0 1537 236 69 22 chr20 19410351 19410642 -47257363 - LTR16C LTR ERVL -160 331 8 1001 215 0 11 chr20 19410840 19411026 -47256979 + MER5A DNA MER1_type 6 189 0 185 240 80 0 chr20 19413281 19413331 -47254674 + L3 LINE CR1 1077 1130 -447 378 300 147 18 chr20 19413352 19413522 -47254483 + L3 LINE CR1 1383 1574 -3 208 302 151 0 chr20 19413608 19413714 -47254291 - MIR3 SINE MIR -23 185 64 311 326 97 41 chr20 19413822 19414018 -47253987 - MIR SINE MIR -6 256 50 528 256 98 0 chr20 19414678 19414842 -47253163 + MER3 DNA MER1_type 10 189 -20 392 328 175 19 chr20 19414859 19415277 -47252728 + L2 LINE L2 2809 3291 -22 385 270 137 19 chr20 19415360 19415621 -47252384 - MLT1H1 LTR MaLR -16 539 231 2155 99 23 20 chr20 19415624 19415926 -47252079 - AluSx SINE Alu -9 303 1 361 221 157 21 chr20 19415926 19416066 -47251939 - MLT1H1 LTR MaLR -309 240 82 435 289 208 0 chr20 19416135 19416284 -47251721 - MER5A DNA MER1_type -1 188 9 762 262 177 14 chr20 19416585 19416952 -47251053 - MLT1K LTR MaLR -11 577 151 343 313 36 0 chr20 19417029 19417141 -47250864 - MLT1K LTR MaLR -412 176 61 283 222 0 0 chr20 19417471 19417525 -47250480 + MER103 DNA DNA 64 117 -49 408 234 96 0 chr20 19417578 19417672 -47250333 - MIR SINE MIR -59 149 47 612 279 45 25 chr20 19418319 19418520 -47249485 + MIR SINE MIR 50 254 -8 2255 68 24 24 chr20 19418985 19419279 -47248726 + AluY SINE Alu 1 294 -17 2207 123 0 0 chr20 19419471 19419763 -47248242 - AluSq SINE Alu -21 292 1 1916 144 9 75 chr20 19419803 19420136 -47247869 + AluSx SINE Alu 1 311 -1 535 246 21 14 chr20 19420255 19420397 -47247608 + Charlie8 DNA MER1_type 38 180 -2237 331 240 64 40 chr20 19421628 19421753 -47246252 + MIR SINE MIR 120 247 -15 582 272 108 15 chr20 19421809 19422077 -47245928 - LTR16C LTR ERVL -48 443 151 336 315 140 20 chr20 19422187 19422387 -47245618 + MIR SINE MIR 20 243 -19 878 185 11 11 chr20 19422838 19423022 -47244983 - MER53 DNA DNA -5 184 1 763 208 158 67 chr20 19423332 19423750 -47244255 - LTR16A1 LTR ERVL 0 457 2 1931 173 70 70 chr20 19424675 19424849 -47243156 + L1MB2 LINE L1 5640 5812 -359 1686 143 37 37 chr20 19424849 19425143 -47242862 + AluJo SINE Alu 1 294 -18 1931 173 70 70 chr20 19425143 19425434 -47242571 + L1MB2 LINE L1 5812 6124 -47 1919 143 0 14 chr20 19425434 19425751 -47242254 + AluJo SINE Alu 3 315 0 1931 173 70 70 chr20 19425751 19425798 -47242207 + L1MB2 LINE L1 6124 6169 -2 2110 120 36 10 chr20 19425809 19426110 -47241895 + AluSx SINE Alu 3 311 -1 1208 232 36 42 chr20 19426505 19426841 -47241164 - MER46C DNA MER2_type -4 334 1 250 286 157 43 chr20 19426891 19427031 -47240974 - MIR3 SINE MIR -29 179 24 244 227 0 61 chr20 19427236 19427302 -47240703 + L2 LINE L2 3211 3272 0 239 339 0 0 chr20 19427564 19427626 -47240379 + L2 LINE L2 3252 3313 0 755 274 48 34 chr20 19427648 19427940 -47240065 - MLT1K LTR MaLR -3 585 290 1232 158 81 5 chr20 19428213 19428422 -47239583 - AluJb SINE Alu -1 311 87 1793 149 80 3 chr20 19428465 19428753 -47239252 + AluSx SINE Alu 1 310 -2 748 134 0 25 chr20 19428780 19428899 -47239106 - FLAM_C SINE Alu -26 117 2 1886 109 109 7 chr20 19430082 19430358 -47237647 - AluSg SINE Alu -6 304 1 2281 113 0 22 chr20 19430995 19431313 -47236692 - AluSq SINE Alu 0 313 3 272 290 14 0 chr20 19431327 19431396 -47236609 + MIR3 SINE MIR 91 160 -48 27 0 0 0 chr20 19431560 19431587 -47236418 + AT_rich Low_complexity Low_complexity 1 27 0 755 238 18 6 chr20 19431852 19432020 -47235985 + MER5B DNA MER1_type 3 172 -6 2198 139 8 0 chr20 19432030 19432396 -47235609 + L1MB2 LINE L1 5555 5923 -260 1442 157 16 4 chr20 19432458 19432707 -47235298 + L1MB2 LINE L1 5915 6166 -5 416 227 167 27 chr20 19432756 19432906 -47235099 + MER5A DNA MER1_type 13 183 -6 550 272 138 28 chr20 19432958 19433241 -47234764 + MLT1L LTR MaLR 1 314 -301 2540 87 0 0 chr20 19433263 19433574 -47234431 - AluSx SINE Alu 0 312 2 261 330 9 9 chr20 19433653 19433754 -47234251 + MLT1L LTR MaLR 494 594 -21 1108 173 23 27 chr20 19433754 19433974 -47234031 - MER20 DNA MER1_type 0 219 1 286 303 0 9 chr20 19435371 19435480 -47232525 + MLT1L LTR MaLR 508 615 0 2354 108 0 0 chr20 19435596 19435901 -47232104 + AluSq SINE Alu 1 305 -8 1803 169 0 14 chr20 19438051 19438368 -47229637 - AluJb SINE Alu 0 312 4 523 273 1 46 chr20 19438406 19438637 -47229368 - L1ME3 LINE L1 0 6170 5949 803 212 86 31 chr20 19438700 19438922 -47229083 - L1ME1 LINE L1 -3 6163 5930 1594 150 75 14 chr20 19439616 19439910 -47228095 - AluJb SINE Alu 0 312 1 1131 177 39 12 chr20 19440729 19440983 -47227022 + Charlie5 DNA MER1_type 2364 2624 0 2072 140 3 0 chr20 19441338 19441631 -47226374 + AluSx SINE Alu 1 294 -18 613 322 53 16 chr20 19441995 19442240 -47225765 - MIR SINE MIR 0 262 9 2062 123 48 0 chr20 19442878 19443171 -47224834 + AluSx SINE Alu 1 307 -5 313 217 2 0 chr20 19443427 19443496 -47224509 - MER45 DNA AcHobo -4 1577 105 939 174 12 36 chr20 19443496 19443663 -47224342 + FRAM SINE Alu 4 166 0 2207 105 7 7 chr20 19443668 19443973 -47224032 + AluSc SINE Alu 1 305 -4 268 296 16 40 chr20 19443980 19444105 -47223900 - MER45 DNA AcHobo -918 122 1 2102 108 38 0 chr20 19444251 19444539 -47223466 - AluSx SINE Alu -13 299 1 227 313 48 0 chr20 19445210 19445293 -47222712 + MIR SINE MIR 176 262 0 23 33 0 0 chr20 19445361 19445391 -47222614 + AT_rich Low_complexity Low_complexity 1 30 0 1154 147 50 46 chr20 19446468 19446686 -47221319 + MER20 DNA MER1_type 1 219 0 2204 113 27 0 chr20 19446692 19447025 -47220980 + AluSx SINE Alu 5 345 0 398 195 258 0 chr20 19447156 19447291 -47220714 + MER5A DNA MER1_type 5 180 -9 436 240 80 57 chr20 19447782 19447957 -47220048 - HAL1b LINE L1 -2 1346 1168 1918 176 158 24 chr20 19447991 19448491 -47219514 - MLT1F1 LTR MaLR 0 567 1 1228 231 67 3 chr20 19448492 19448791 -47219214 - L1ME1 LINE L1 -5 6161 5844 1004 268 96 33 chr20 19448886 19449281 -47218724 + LTR16C LTR ERVL 71 490 -1 542 219 122 87 chr20 19449282 19449490 -47218515 - HAL1b LINE L1 -240 1108 909 3245 67 64 5 chr20 19449490 19449909 -47218096 + MLT2A1 LTR ERVL 1 444 0 542 219 122 87 chr20 19449909 19450174 -47217831 - HAL1b LINE L1 -439 909 618 1112 280 64 21 chr20 19450181 19450570 -47217435 - MLT1I LTR MaLR -2 407 2 954 238 166 47 chr20 19451298 19451769 -47216236 + MLT1H LTR MaLR 23 549 0 420 246 106 55 chr20 19451846 19452036 -47215969 + MIR SINE MIR 2 204 -58 2477 109 0 0 chr20 19452036 19452348 -47215657 + AluSx SINE Alu 1 312 0 180 234 78 16 chr20 19452469 19452533 -47215472 - L3 LINE CR1 0 1577 1510 618 271 97 11 chr20 19453058 19453439 -47214566 - LTR16C LTR ERVL 0 491 64 279 291 106 26 chr20 19453503 19453654 -47214351 + MIR SINE MIR 26 188 -74 2890 171 34 22 chr20 19453713 19454302 -47213703 + L1MA4 LINE L1 5703 6298 -2 212 271 0 0 chr20 19454363 19454411 -47213594 - L2 LINE L2 -208 3064 3017 584 204 19 0 chr20 19454435 19454538 -47213467 + FLAM_C SINE Alu 2 106 -37 1092 231 97 84 chr20 19454918 19455443 -47212562 + MLT1H LTR MaLR 18 549 0 974 224 99 128 chr20 19456267 19456464 -47211541 - L2 LINE L2 -6 3307 3106 2182 118 3 0 chr20 19456464 19456761 -47211244 + AluSp SINE Alu 1 298 -15 974 224 99 128 chr20 19456761 19457380 -47210625 - L2 LINE L2 -207 3106 2462 517 252 0 15 chr20 19457409 19457540 -47210465 - L2 LINE L2 -1258 2056 1928 995 256 113 6 chr20 19457598 19457926 -47210079 - L2 LINE L2 -1669 1645 1283 573 30 50 20 chr20 19458007 19458108 -47209897 + (TAGA)n Simple_repeat Simple_repeat 1 104 0 305 298 63 19 chr20 19458147 19458305 -47209700 + L1ME4a LINE L1 5955 6119 -2 198 347 146 7 chr20 19458765 19458909 -47209096 + MIR3 SINE MIR 23 186 -22 2124 122 0 0 chr20 19458968 19459282 -47208723 + AluSg SINE Alu 1 314 0 1024 275 75 21 chr20 19459395 19459781 -47208224 - MLT1I LTR MaLR 0 409 3 232 268 87 106 chr20 19459939 19460066 -47207939 - L1ME4a LINE L1 -32 6089 5961 1788 172 32 9 chr20 19460066 19460409 -47207596 - L1MB7 LINE L1 -1 6183 5833 232 268 87 106 chr20 19460409 19460437 -47207568 - L1ME4a LINE L1 -160 5961 5934 2058 114 19 23 chr20 19460437 19460745 -47207260 + AluSx SINE Alu 1 307 -5 232 268 87 106 chr20 19460745 19460853 -47207152 - L1ME4a LINE L1 -187 5934 5825 2460 88 0 0 chr20 19460853 19461161 -47206844 - AluSx SINE Alu -4 308 1 232 268 87 106 chr20 19461161 19461309 -47206696 - L1ME4a LINE L1 -296 5825 5684 268 314 9 9 chr20 19461344 19461449 -47206556 - L1MB7 LINE L1 -437 5684 5580 504 260 120 47 chr20 19461494 19461959 -47206046 + L2 LINE L2 2743 3308 -5 235 191 60 71 chr20 19462827 19462911 -47205094 - MARNA DNA Mariner -145 441 359 2025 248 133 5 chr20 19462990 19463627 -47204378 - L1ME3A LINE L1 -10 6160 5442 883 178 40 7 chr20 19463655 19463807 -47204198 - FRAM SINE Alu -16 160 4 2058 165 104 66 chr20 19463901 19464094 -47203911 - LTR36 LTR ERV1 0 611 427 1971 160 0 10 chr20 19464094 19464401 -47203604 + AluJb SINE Alu 1 304 -8 2058 165 104 66 chr20 19464401 19464796 -47203209 - LTR36 LTR ERV1 -184 427 1 608 294 156 36 chr20 19465374 19466054 -47201951 + L2 LINE L2 2448 3202 -111 315 287 78 47 chr20 19466410 19466539 -47201466 - L2 LINE L2 -23 3249 3117 1244 266 31 6 chr20 19466675 19467025 -47200980 + LTR16C LTR ERVL 133 491 0 531 249 159 5 chr20 19467059 19467260 -47200745 - Charlie8 DNA MER1_type -2152 265 34 590 276 93 1 chr20 19467589 19467775 -47200230 - MIR SINE MIR -28 234 33 249 336 39 19 chr20 19467773 19467877 -47200128 - L2 LINE L2 -484 2830 2725 * 779 329 120 24 chr20 19467957 19468541 -47199464 - L2 LINE L2 -883 2431 1792 216 0 0 0 chr20 19468685 19468709 -47199296 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 791 249 150 27 chr20 19469557 19469890 -47198115 + MLT1G LTR MaLR 217 590 0 575 306 169 21 chr20 19469890 19470559 -47197446 - L2 LINE L2 -27 3286 2450 1743 254 10 60 chr20 19470559 19470964 -47197041 - L1ME LINE L1 -5418 652 285 1984 140 65 0 chr20 19470964 19471257 -47196748 - AluSq SINE Alu -1 312 1 1743 254 10 60 chr20 19471257 19471454 -47196551 - L1ME LINE L1 -5785 285 80 * 4745 150 33 14 chr20 19471443 19472317 -47195688 - L1MD1 LINE L1 -14 6228 5338 270 0 0 0 chr20 19472573 19472603 -47195402 + (TC)n Simple_repeat Simple_repeat 2 31 0 406 286 244 13 chr20 19473425 19473733 -47194272 - MLT1J2 LTR MaLR -6 444 66 298 167 167 0 chr20 19474002 19474062 -47193943 + MER58A DNA MER1_type 7 76 -31 775 144 66 24 chr20 19474118 19474285 -47193720 - MER96B DNA MER1_type? -239 178 5 252 255 14 7 chr20 19474875 19475016 -47192989 + CT-rich Low_complexity Low_complexity 1 142 0 264 161 0 0 chr20 19475079 19475141 -47192864 + CT-rich Low_complexity Low_complexity 2 63 0 616 284 53 72 chr20 19475482 19475544 -47192461 + L1ME3A LINE L1 5603 5665 -505 2112 134 10 3 chr20 19475544 19475849 -47192156 + AluSg SINE Alu 1 307 -3 616 284 53 72 chr20 19475849 19475975 -47192030 + L1ME3A LINE L1 5665 5792 -378 2290 63 0 21 chr20 19475975 19476259 -47191746 + AluY SINE Alu 13 290 -21 616 284 53 72 chr20 19476259 19476593 -47191412 + L1ME3A LINE L1 5792 6116 -54 1542 125 73 31 chr20 19476606 19476893 -47191112 - MSTB1 LTR MaLR -133 299 1 434 306 71 20 chr20 19477595 19477850 -47190155 - MER115 DNA AcHobo -367 326 59 388 203 104 109 chr20 19477916 19478108 -47189897 - L2 LINE L2 -308 3005 2815 2061 234 21 41 chr20 19478135 19478742 -47189263 - L1ME3 LINE L1 -7 6155 5561 441 328 26 5 chr20 19478754 19478943 -47189062 - L2 LINE L2 -569 2745 2553 2041 133 0 3 chr20 19479246 19479540 -47188465 - AluSx SINE Alu -19 293 1 977 283 71 15 chr20 19479965 19480372 -47187633 - MLT1K LTR MaLR -1 587 158 38 0 0 0 chr20 19480475 19480513 -47187492 + AT_rich Low_complexity Low_complexity 1 38 0 23 0 0 0 chr20 19480534 19480557 -47187448 + AT_rich Low_complexity Low_complexity 1 23 0 399 209 12 0 chr20 19480778 19480864 -47187141 - MER117 DNA MER1_type -51 146 60 933 246 30 0 chr20 19481181 19481380 -47186625 + MER63A DNA MER1_type 4 208 -2 1996 151 0 0 chr20 19481761 19482069 -47185936 + AluSx SINE Alu 1 308 0 355 244 57 0 chr20 19482089 19482212 -47185793 - L1MC5 LINE L1 -108 7853 7724 1619 167 0 8 chr20 19482356 19482608 -47185397 - AluSx SINE Alu -13 299 50 1792 144 0 15 chr20 19482609 19482880 -47185125 + AluJo SINE Alu 45 311 -1 230 167 0 21 chr20 19482884 19482932 -47185073 + Charlie8 DNA MER1_type 76 122 -2295 458 291 52 6 chr20 19483023 19483195 -47184810 + LTR16C LTR ERVL 200 379 -112 194 197 49 66 chr20 19483839 19483900 -47184105 + L2 LINE L2 3246 3305 -8 380 223 10 0 chr20 19483949 19484052 -47183953 + CT-rich Low_complexity Low_complexity 1 104 0 582 255 152 33 chr20 19484077 19484379 -47183626 + L1MC4a LINE L1 5706 6043 -1765 604 263 88 77 chr20 19484726 19484895 -47183110 - L2 LINE L2 -1 3312 3146 2159 130 0 0 chr20 19484895 19485195 -47182810 + AluJb SINE Alu 1 300 -12 604 263 88 77 chr20 19485195 19485401 -47182604 - L2 LINE L2 -167 3146 2933 271 273 52 0 chr20 19485777 19485854 -47182151 - MER103 DNA DNA -83 83 3 903 251 127 35 chr20 19486307 19486646 -47181359 + L1ME3 LINE L1 5622 5991 -171 2238 78 0 0 chr20 19486782 19487053 -47180952 + AluSc SINE Alu 35 305 -4 308 324 81 58 chr20 19487149 19487793 -47180212 + L2 LINE L2 2554 3221 -51 892 248 53 27 chr20 19487882 19488140 -47179865 + LTR16C LTR ERVL 75 339 -152 719 201 49 70 chr20 19488140 19488237 -47179768 - LTR29 LTR ERV1 0 622 525 2062 132 36 7 chr20 19488237 19488540 -47179465 + AluSx SINE Alu 1 312 0 719 201 49 70 chr20 19488540 19488688 -47179317 - LTR29 LTR ERV1 -97 525 383 714 105 142 110 chr20 19488692 19488930 -47179075 - LTR29 LTR ERV1 -423 214 1 410 227 103 0 chr20 19488951 19489048 -47178957 + LTR16C LTR ERVL 368 474 -17 712 213 46 20 chr20 19490202 19490399 -47177606 + MER33 DNA MER1_type 30 231 -93 272 200 24 12 chr20 19490416 19490434 -47177571 + A-rich Low_complexity Low_complexity 5 21 -69 10854 50 47 8 chr20 19490434 19491765 -47176240 + SVA Other Other 3 1386 0 272 200 24 12 chr20 19491765 19491831 -47176174 + A-rich Low_complexity Low_complexity 21 90 0 22 0 0 0 chr20 19491909 19491931 -47176074 + AT_rich Low_complexity Low_complexity 1 22 0 204 49 49 49 chr20 19491934 19491975 -47176030 + (TAAAAA)n Simple_repeat Simple_repeat 1 41 0 1993 193 40 24 chr20 19491989 19492106 -47175899 + MLT1C LTR MaLR 3 117 -350 2502 118 41 14 chr20 19492106 19492523 -47175482 + MSTA LTR MaLR 1 428 0 1993 193 40 24 chr20 19492523 19492855 -47175150 + MLT1C LTR MaLR 117 459 -8 294 349 52 23 chr20 19492874 19493046 -47174959 - MIR SINE MIR -66 196 20 1445 141 168 32 chr20 19493048 19493388 -47174617 + LTR45B LTR ERV1 3 388 -101 959 292 35 44 chr20 19493499 19493931 -47174074 - L2 LINE L2 0 3313 2886 214 275 14 43 chr20 19495051 19495120 -47172885 - MIR3 SINE MIR -49 159 93 1247 208 118 10 chr20 19495526 19495839 -47172166 + L1ME1 LINE L1 5816 6162 -4 381 133 5 16 chr20 19496153 19496226 -47171779 + MLT1G1 LTR MaLR 482 595 0 262 200 0 0 chr20 19496446 19496496 -47171509 + L2 LINE L2 3263 3312 -1 216 288 45 68 chr20 19496689 19496821 -47171184 - L2 LINE L2 -250 3063 2935 294 377 23 8 chr20 19496891 19497021 -47170984 + MIR SINE MIR 22 153 -55 898 264 20 0 chr20 19497037 19497234 -47170771 - MER63A DNA MER1_type -9 201 1 2056 150 40 0 chr20 19497358 19497658 -47170347 + AluSx SINE Alu 1 312 0 246 128 0 0 chr20 19497829 19497868 -47170137 + (CA)n Simple_repeat Simple_repeat 2 40 0 435 329 150 21 chr20 19498953 19499239 -47168766 - LTR16C LTR ERVL 0 491 169 180 0 0 0 chr20 19499448 19499468 -47168537 + (CACCC)n Simple_repeat Simple_repeat 5 24 0 250 235 184 10 chr20 19499586 19499684 -47168321 + L2 LINE L2 3137 3251 -21 3399 176 43 61 chr20 19500037 19500835 -47167170 - L1MB5 LINE L1 -141 6033 5250 2295 80 19 32 chr20 19500835 19501146 -47166859 + AluY SINE Alu 1 307 -4 3399 176 43 61 chr20 19501146 19501470 -47166535 - L1MB5 LINE L1 -924 5250 4922 450 322 7 7 chr20 19501482 19501625 -47166380 - MIR SINE MIR -74 188 46 317 239 86 0 chr20 19501931 19502048 -47165957 + LTR16C LTR ERVL 362 488 -3 2257 111 0 3 chr20 19502945 19503242 -47164763 - AluSg SINE Alu -14 296 1 743 214 26 13 chr20 19503501 19503655 -47164350 - MER5B DNA MER1_type 0 178 23 429 145 7 179 chr20 19503662 19503807 -47164198 - MER5A DNA MER1_type 0 189 70 909 194 7 0 chr20 19503834 19503989 -47164016 - FRAM SINE Alu -23 153 1 377 294 29 29 chr20 19504304 19504508 -47163497 + L2 LINE L2 2582 2785 -529 319 314 57 0 chr20 19504572 19504677 -47163328 + LTR16B LTR ERVL 91 201 -263 355 296 21 7 chr20 19504929 19505037 -47162968 - LTR16A1 LTR ERVL -49 408 299 495 213 0 0 chr20 19505037 19505130 -47162875 + REP3 LTR ERV 1 93 -469 2113 144 161 7 chr20 19505130 19505560 -47162445 + MLT1D LTR MaLR 1 496 -9 1251 220 124 14 chr20 19505569 19505924 -47162081 + REP3 LTR ERV 89 482 -80 1176 179 5 28 chr20 19506927 19507145 -47160860 - MER58A DNA MER1_type -11 213 1 511 250 71 12 chr20 19507206 19507374 -47160631 + MER117 DNA MER1_type 1 178 -19 300 300 56 0 chr20 19507393 19507483 -47160522 - MIR3 SINE MIR -51 157 63 567 284 61 101 chr20 19508280 19508675 -47159330 + LTR16C LTR ERVL 83 461 -30 634 226 0 0 chr20 19508701 19508825 -47159180 - FLAM_A SINE Alu -5 128 5 577 222 161 24 chr20 19509189 19509437 -47158568 + MLT1K LTR MaLR 303 584 -4 237 229 16 33 chr20 19509642 19509703 -47158302 - LTR16C LTR ERVL 0 491 432 670 282 62 13 chr20 19509777 19510035 -47157970 - MLT1L LTR MaLR -19 596 246 1159 289 63 31 chr20 19510057 19510514 -47157491 + LTR16C LTR ERVL 4 475 -16 339 342 23 60 chr20 19510805 19511071 -47156934 + L3 LINE CR1 633 888 -689 342 137 6 2 chr20 19511085 19511350 -47156655 + AluSq SINE Alu 1 315 0 1167 214 150 6 chr20 19511424 19511751 -47156254 + MLT1A2 LTR MaLR 1 374 0 475 381 53 17 chr20 19511766 19512068 -47155937 + L3 LINE CR1 1000 1312 -265 572 291 122 0 chr20 19512081 19512277 -47155728 - LTR33A LTR ERVL 0 523 304 523 203 57 63 chr20 19512378 19512536 -47155469 - LTR33A LTR ERVL -361 162 6 552 229 23 57 chr20 19513688 19513863 -47154142 + MER5B DNA MER1_type 1 169 -9 821 271 108 55 chr20 19513863 19514372 -47153633 + MLT1F LTR MaLR 1 536 -6 24 0 0 0 chr20 19514600 19514624 -47153381 + AT_rich Low_complexity Low_complexity 1 24 0 229 333 36 14 chr20 19514699 19514837 -47153168 - MIR3 SINE MIR -65 143 3 396 0 0 0 chr20 19514848 19514892 -47153113 + (CA)n Simple_repeat Simple_repeat 2 45 0 855 259 122 75 chr20 19514900 19515352 -47152653 + MLT1J LTR MaLR 1 473 -38 259 223 23 16 chr20 19515967 19516052 -47151953 + MLT1I LTR MaLR 316 641 -13 330 297 187 27 chr20 19516059 19516359 -47151646 + L2 LINE L2 2408 2755 -559 3627 157 30 30 chr20 19516595 19516668 -47151337 + L1MA7 LINE L1 5535 5607 -684 2349 72 0 26 chr20 19516668 19516974 -47151031 + AluY SINE Alu 1 298 -13 3627 157 30 30 chr20 19516974 19517410 -47150595 + L1MA7 LINE L1 5607 6047 -244 2555 65 3 0 chr20 19517410 19517719 -47150286 - AluY SINE Alu -1 310 1 3627 157 30 30 chr20 19517719 19517964 -47150041 + L1MA7 LINE L1 6046 6290 -1 1817 154 10 13 chr20 19517981 19518279 -47149726 + AluJo SINE Alu 1 297 -15 219 276 35 0 chr20 19518296 19518354 -47149651 + L2 LINE L2 3117 3176 -96 228 308 8 26 chr20 19518503 19518620 -47149385 + GA-rich Low_complexity Low_complexity 3 117 0 978 201 70 96 chr20 19519289 19519632 -47148373 - MER58B DNA MER1_type -3 338 5 227 279 33 0 chr20 19519650 19519711 -47148294 + MER5C DNA MER1_type 62 124 -200 243 197 76 15 chr20 19519813 19519879 -47148126 + MER5C DNA MER1_type 252 321 -3 296 339 37 0 chr20 19520618 19520727 -47147278 + MIR SINE MIR 34 146 -62 561 208 197 22 chr20 19521087 19521265 -47146740 - MER3 DNA MER1_type 0 209 1 361 232 12 12 chr20 19522315 19522397 -47145608 + LTR16C LTR ERVL 399 480 -11 2118 217 45 32 chr20 19523825 19524382 -47143623 - L1MD3 LINE L1 -10 7985 7422 479 174 80 14 chr20 19524376 19524514 -47143491 - L1ME2 LINE L1 -239 5925 5779 * 631 242 58 54 chr20 19524767 19524970 -47143035 + MIR SINE MIR 2 208 -54 2343 107 3 0 chr20 19524970 19525268 -47142737 + AluSx SINE Alu 1 299 -13 631 242 58 54 chr20 19525268 19525324 -47142681 + MIR SINE MIR 208 262 0 2282 99 3 0 chr20 19525343 19525650 -47142355 + AluSp SINE Alu 1 308 0 1415 127 15 50 chr20 19525854 19525889 -47142116 - MLT2D LTR ERVL -2 412 377 359 73 18 0 chr20 19525889 19525944 -47142061 + (TG)n Simple_repeat Simple_repeat 1 56 0 1415 127 15 50 chr20 19525944 19526243 -47141762 - MLT2D LTR ERVL -37 377 1 333 324 48 0 chr20 19526459 19526604 -47141401 - Charlie8 DNA MER1_type -2261 156 5 729 207 56 0 chr20 19526739 19526918 -47141087 - MER5A DNA MER1_type 0 189 1 682 99 0 92 chr20 19527198 19527281 -47140724 + L1MB4 LINE L1 6060 6128 -52 1700 146 91 11 chr20 19527281 19527556 -47140449 + AluJo SINE Alu 1 297 -15 682 99 0 92 chr20 19527556 19527603 -47140402 + L1MB4 LINE L1 6128 6178 -2 232 213 160 27 chr20 19527701 19527776 -47140229 - MIR3 SINE MIR -16 192 108 1070 237 134 44 chr20 19527868 19528330 -47139675 + MLT1D LTR MaLR 7 502 -3 1094 118 106 0 chr20 19529974 19530135 -47137870 - FRAM SINE Alu -2 174 1 1915 299 57 26 chr20 19530282 19530743 -47137262 - MER115 DNA AcHobo -24 669 181 1862 177 0 13 chr20 19530743 19531048 -47136957 + AluJo SINE Alu 1 301 -11 1915 299 57 26 chr20 19531048 19531235 -47136770 - MER115 DNA AcHobo -512 181 1 561 264 6 31 chr20 19531235 19531258 -47136747 + MIR SINE MIR 83 105 -157 1420 164 117 33 chr20 19531258 19531618 -47136387 - MLT1B LTR MaLR 0 390 1 561 264 6 31 chr20 19531618 19531753 -47136252 + MIR SINE MIR 105 237 -25 1980 270 42 13 chr20 19531763 19532289 -47135716 - MLT1H1 LTR MaLR -14 541 1 635 280 93 0 chr20 19532637 19532819 -47135186 + MER63A DNA MER1_type 1 199 -11 222 299 131 0 chr20 19532899 19532998 -47135007 - L2 LINE L2 -236 3036 2921 2572 81 0 0 chr20 19532998 19533308 -47134697 + AluY SINE Alu 1 310 -1 1828 129 39 4 chr20 19533433 19533713 -47134292 + AluSx SINE Alu 1 290 -22 2099 152 70 0 chr20 19533785 19534154 -47133851 - MER57A LTR ERV1 -1 402 8 180 94 31 0 chr20 19534179 19534211 -47133794 - L2 LINE L2 -569 2745 2713 312 266 113 8 chr20 19534790 19534914 -47133091 - MIR SINE MIR -70 192 56 202 246 87 14 chr20 19535718 19535787 -47132218 + MIR SINE MIR 51 124 -84 382 222 111 30 chr20 19535879 19536014 -47131991 + L1MC4 LINE L1 7456 7601 -441 640 236 57 78 chr20 19536066 19536397 -47131608 + L1MC4 LINE L1 7719 8042 0 379 190 51 0 chr20 19536493 19536572 -47131433 - L2 LINE L2 -2 3311 3229 547 247 113 22 chr20 19536683 19536969 -47131036 + LTR16A LTR ERVL 84 437 -13 471 252 50 43 chr20 19536979 19537327 -47130678 - LTR33 LTR ERVL -9 512 106 310 286 48 62 chr20 19537725 19537935 -47130070 + HAL1 LINE L1 2245 2451 -56 222 37 0 0 chr20 19537966 19537993 -47130012 + (CA)n Simple_repeat Simple_repeat 2 28 0 991 296 139 7 chr20 19538165 19538624 -47129381 - MLT1G1 LTR MaLR 0 595 76 35 0 0 0 chr20 19538880 19538915 -47129090 + AT_rich Low_complexity Low_complexity 1 35 0 399 274 44 18 chr20 19539102 19539215 -47128790 + MER91C DNA MER1_type 25 140 0 538 197 197 7 chr20 19539279 19539426 -47128579 + MER5B DNA MER1_type 1 175 -3 271 310 231 20 chr20 19540377 19540680 -47127325 - L2 LINE L2 0 3272 2906 1830 167 7 7 chr20 19541016 19541303 -47126702 + AluJo SINE Alu 2 288 -24 1650 166 147 3 chr20 19541370 19541744 -47126261 + MSTC LTR MaLR 1 428 0 454 334 92 18 chr20 19541744 19542136 -47125869 + L1MC4 LINE L1 7480 7900 -142 1877 173 10 0 chr20 19542142 19542443 -47125562 + AluJo SINE Alu 1 304 -8 188 173 27 40 chr20 19542492 19542567 -47125438 + GA-rich Low_complexity Low_complexity 4 77 0 370 219 219 0 chr20 19542588 19542702 -47125303 + L1MC4 LINE L1 7904 8042 0 232 302 103 17 chr20 19543626 19543742 -47124263 + MIR SINE MIR 20 145 -117 342 135 0 0 chr20 19544146 19544198 -47123807 + Tigger3b DNA MER2_type 41 92 -1139 570 165 0 0 chr20 19544198 19544295 -47123710 + AluJb SINE Alu 204 300 -12 6691 112 42 16 chr20 19544295 19545410 -47122595 + Tigger3b DNA MER2_type 88 1231 0 2281 125 0 0 chr20 19545494 19545797 -47122208 + AluSx SINE Alu 1 303 -9 1089 305 81 35 chr20 19545810 19546223 -47121782 + L1MC4a LINE L1 4918 4792 -1354 2262 102 7 0 chr20 19546223 19546517 -47121488 - AluSx SINE Alu -16 296 1 1089 305 81 35 chr20 19546517 19547002 -47121003 + L1MC4a LINE L1 4791 5252 -894 550 236 32 83 chr20 19549038 19549254 -47118751 - Charlie8 DNA MER1_type -2210 207 3 2278 114 10 3 chr20 19549507 19549813 -47118192 - AluSx SINE Alu -4 308 1 217 218 36 82 chr20 19549975 19550045 -47117960 - MIR SINE MIR -48 214 149 2329 101 0 3 chr20 19550045 19550342 -47117663 - AluSg SINE Alu -14 296 1 217 218 36 82 chr20 19550342 19550381 -47117624 - MIR SINE MIR -113 149 110 614 263 43 60 chr20 19550490 19550791 -47117214 + LTR16A1 LTR ERVL 159 454 -3 203 343 0 37 chr20 19551763 19551897 -47116108 + MIR SINE MIR 106 234 -28 214 255 20 0 chr20 19552407 19552458 -47115547 - L2 LINE L2 -11 3261 3210 266 340 90 21 chr20 19552877 19553065 -47114940 - MIR SINE MIR -42 220 20 742 228 75 31 chr20 19553152 19553406 -47114599 - LTR16C LTR ERVL -26 465 201 2075 117 20 13 chr20 19553455 19553753 -47114252 - AluSx SINE Alu -12 300 1 286 244 47 12 chr20 19553773 19553859 -47114146 - MER5B DNA MER1_type -57 121 33 1017 99 44 22 chr20 19554441 19554622 -47113383 + MER53 DNA DNA 4 188 -1 194 355 65 16 chr20 19555638 19555762 -47112243 - L2 LINE L2 -1 3271 3142 270 312 138 0 chr20 19555811 19555920 -47112085 + MIR SINE MIR 120 243 -19 208 299 81 11 chr20 19556127 19556214 -47111791 - L2 LINE L2 -252 3020 2928 857 174 7 7 chr20 19556552 19556707 -47111298 - AluJo SINE Alu -1 311 157 245 246 29 14 chr20 19556708 19556777 -47111228 + MIR SINE MIR 31 100 -162 836 186 103 0 chr20 19556777 19556804 -47111201 - AluJo SINE Alu -152 160 137 899 81 23 29 chr20 19556804 19556976 -47111029 + (TTTC)n Simple_repeat Simple_repeat 2 172 0 836 186 103 0 chr20 19556976 19557093 -47110912 - AluJo SINE Alu -175 137 1 284 260 180 27 chr20 19557120 19557270 -47110735 - MIR SINE MIR -84 178 6 1370 120 0 16 chr20 19557272 19557291 -47110714 + AluSc SINE Alu 115 133 -176 2199 104 0 10 chr20 19557291 19557609 -47110396 + AluY SINE Alu 1 311 0 1370 120 0 16 chr20 19557609 19557780 -47110225 + AluSc SINE Alu 133 302 -7 815 282 158 18 chr20 19557962 19558419 -47109586 - LTR33A LTR ERVL 0 523 3 244 222 63 0 chr20 19558440 19558503 -47109502 - MIR SINE MIR -78 184 118 222 267 0 17 chr20 19558505 19558565 -47109440 + (CA)n Simple_repeat Simple_repeat 2 60 0 188 311 0 67 chr20 19558565 19558684 -47109321 - MIR SINE MIR -105 157 47 224 59 29 0 chr20 19558753 19558787 -47109218 + (CAA)n Simple_repeat Simple_repeat 1 35 0 1861 146 45 0 chr20 19559034 19559322 -47108683 - AluJb SINE Alu -11 301 1 366 294 10 10 chr20 19559568 19559877 -47108128 + (CA)n Simple_repeat Simple_repeat 1 309 0 203 200 0 20 chr20 19560337 19560387 -47107618 + MIR SINE MIR 91 139 -69 385 289 40 33 chr20 19561175 19561327 -47106678 + MER115 DNA AcHobo 11 163 -530 1479 218 135 48 chr20 19561977 19562472 -47105533 - MLT1H LTR MaLR -11 538 1 16082 118 29 49 chr20 19562700 19563285 -47104720 - Tigger2 DNA MER2_type -3 2715 2120 2258 122 7 0 chr20 19563285 19563581 -47104424 - AluSx SINE Alu -14 298 1 16082 118 29 49 chr20 19563581 19564668 -47103337 - Tigger2 DNA MER2_type -598 2120 1119 2347 74 44 0 chr20 19564668 19564966 -47103039 - AluY SINE Alu 0 311 1 16082 118 29 49 chr20 19564966 19566063 -47101942 - Tigger2 DNA MER2_type -1599 1119 1 683 241 87 46 chr20 19566063 19566426 -47101579 - LTR33A LTR ERVL -77 446 3 192 303 17 101 chr20 19566749 19566828 -47101177 - MIR SINE MIR -1 261 194 2327 83 0 0 chr20 19566828 19567140 -47100865 - AluY SINE Alu 0 311 1 192 303 17 101 chr20 19567140 19567179 -47100826 - MIR SINE MIR -68 194 153 213 222 19 0 chr20 19567484 19567505 -47100500 + GA-rich Low_complexity Low_complexity 2 21 -35 1944 175 0 6 chr20 19567505 19567819 -47100186 + AluJb SINE Alu 1 312 0 213 222 19 0 chr20 19567819 19567851 -47100154 + GA-rich Low_complexity Low_complexity 21 56 0 504 72 0 0 chr20 19567851 19567920 -47100085 + (GGGA)n Simple_repeat Simple_repeat 3 71 0 197 299 45 0 chr20 19567920 19567987 -47100018 - MIR SINE MIR -71 137 68 216 235 0 0 chr20 19568243 19568294 -47099711 - MIR SINE MIR -87 121 71 303 28 0 0 chr20 19568575 19568611 -47099394 + (TAA)n Simple_repeat Simple_repeat 2 37 0 1482 199 143 44 chr20 19569045 19569542 -47098463 - MLT1H LTR MaLR 0 549 4 526 244 114 42 chr20 19569701 19569894 -47098111 - MER63A DNA MER1_type 0 210 4 212 239 28 28 chr20 19570058 19570129 -47097876 - L2 LINE L2 -215 3057 2987 315 183 56 0 chr20 19570248 19570319 -47097686 - MLT1J LTR MaLR -19 492 418 318 321 91 32 chr20 19570480 19570667 -47097338 + MIR SINE MIR 46 243 -19 453 116 0 0 chr20 19570678 19570747 -47097258 + (TG)n Simple_repeat Simple_repeat 1 69 0 1392 256 119 20 chr20 19572711 19573247 -47094758 - MLT1E LTR MaLR 0 593 5 2177 134 7 0 chr20 19573410 19573717 -47094288 - AluSx SINE Alu -3 309 1 748 275 99 20 chr20 19573788 19574090 -47093915 + L2 LINE L2 2988 3313 0 186 133 0 0 chr20 19574720 19574750 -47093255 + (GGAA)n Simple_repeat Simple_repeat 4 33 0 1007 259 28 58 chr20 19575086 19575449 -47092556 + MLT1G1 LTR MaLR 1 352 -243 2182 87 28 3 chr20 19576230 19576518 -47091487 + AluSp SINE Alu 1 295 -18 222 233 0 0 chr20 19576589 19576632 -47091373 - L2 LINE L2 -10 3303 3261 918 204 73 19 chr20 19576688 19576894 -47091111 + MER20 DNA MER1_type 2 218 -1 770 249 33 5 chr20 19577206 19577419 -47090586 - MER20 DNA MER1_type 0 219 1 2564 70 0 16 chr20 19577677 19577990 -47090015 - AluY SINE Alu -3 308 1 665 293 24 48 chr20 19578603 19578852 -47089153 + MIR SINE MIR 20 262 0 1213 223 103 3 chr20 19579467 19579786 -47088219 - LTR16C LTR ERVL -5 486 136 503 208 9 9 chr20 19580710 19580816 -47087189 - MIR SINE MIR -57 205 100 272 200 62 75 chr20 19581356 19581436 -47086569 + MIR SINE MIR 111 189 -73 209 350 0 0 chr20 19582373 19582453 -47085552 + MIR3 SINE MIR 120 199 -9 1701 141 47 36 chr20 19582608 19582884 -47085121 - AluJo SINE Alu -33 279 1 1064 170 150 20 chr20 19583033 19583374 -47084631 - LTR37A LTR ERV1 -2 424 40 1699 150 21 31 chr20 19583637 19583923 -47084082 + AluJb SINE Alu 17 299 -13 282 159 0 0 chr20 19584945 19584989 -47083016 - L2 LINE L2 -20 3252 3209 1950 170 0 0 chr20 19585093 19585382 -47082623 + AluJo SINE Alu 1 289 -23 992 218 0 24 chr20 19586382 19586593 -47081412 + MIR SINE MIR 2 207 -55 274 235 265 10 chr20 19586818 19586916 -47081089 - L2 LINE L2 -16 3256 3134 1508 166 87 11 chr20 19587523 19587800 -47080205 - AluJb SINE Alu -14 298 1 269 215 31 0 chr20 19588330 19588395 -47079610 - MER53 DNA DNA -18 171 105 2254 203 23 68 chr20 19588444 19588636 -47079369 + L1MA10 LINE L1 5645 5844 -490 1673 175 3 13 chr20 19588636 19588945 -47079060 + AluJo SINE Alu 1 306 -6 2254 203 23 68 chr20 19588945 19589443 -47078562 + L1MA10 LINE L1 5844 6282 -52 2138 113 3 0 chr20 19589443 19589743 -47078262 + AluSx SINE Alu 1 301 -11 2254 203 23 68 chr20 19589743 19589794 -47078211 + L1MA10 LINE L1 6282 6334 0 795 299 84 32 chr20 19589802 19590264 -47077741 - L2 LINE L2 -782 2532 2047 1173 273 8 31 chr20 19590690 19591074 -47076931 + L1ME2 LINE L1 5780 6154 -10 2377 83 0 3 chr20 19591356 19591669 -47076336 - AluSq SINE Alu -1 312 1 224 213 53 67 chr20 19591679 19591754 -47076251 - L2 LINE L2 -5 3267 3194 832 147 14 14 chr20 19591925 19592068 -47075937 + FLAM_C SINE Alu 1 143 0 358 285 59 112 chr20 19592312 19592346 -47075659 + L1ME4a LINE L1 5676 5710 -411 2083 128 0 0 chr20 19592346 19592651 -47075354 - AluSx SINE Alu -5 307 3 358 285 59 112 chr20 19592651 19592921 -47075084 + L1ME4a LINE L1 5710 5964 -157 335 261 29 32 chr20 19592935 19593108 -47074897 + HAL1b LINE L1 1218 1343 -5 23 0 0 0 chr20 19593111 19593134 -47074871 + AT_rich Low_complexity Low_complexity 1 23 0 2247 89 0 0 chr20 19593192 19593484 -47074521 + AluSq SINE Alu 1 292 -21 965 198 11 6 chr20 19593611 19593788 -47074217 - MER45A DNA AcHobo 0 178 1 417 270 50 0 chr20 19594868 19595027 -47072978 + LTR16C LTR ERVL 300 466 -25 1671 161 4 4 chr20 19595076 19595356 -47072649 + AluJo SINE Alu 13 292 -20 414 297 131 46 chr20 19595776 19596210 -47071795 + LTR33 LTR ERVL 47 517 -4 328 291 146 0 chr20 19596290 19596393 -47071612 + MIR SINE MIR 40 157 -105 497 312 56 32 chr20 19597337 19597801 -47070204 - LTR33 LTR ERVL -9 512 13 1949 128 0 0 chr20 19598978 19599280 -47068725 - AluSx SINE Alu 0 302 1 2095 177 131 23 chr20 19599769 19600256 -47067749 + MLT1F LTR MaLR 1 540 -2 281 221 88 0 chr20 19600259 19600327 -47067678 - LTR33 LTR ERVL -431 90 17 543 322 131 59 chr20 19600401 19600977 -47067028 - L3 LINE CR1 -491 1086 553 678 203 23 0 chr20 19600977 19601105 -47066900 + FLAM_A SINE Alu 1 131 -2 543 322 131 59 chr20 19601105 19601199 -47066806 - L3 LINE CR1 -1024 553 467 1795 221 45 22 chr20 19601199 19601693 -47066312 - MLT1D LTR MaLR 0 505 1 543 322 131 59 chr20 19601693 19601847 -47066158 - L3 LINE CR1 -1110 467 202 280 250 31 0 chr20 19601998 19602062 -47065943 + MIR SINE MIR 8 73 -189 981 212 186 65 chr20 19602062 19602585 -47065420 + MLT1G1 LTR MaLR 1 586 -9 415 217 11 11 chr20 19602636 19602728 -47065277 - LTR16C LTR ERVL -6 485 394 942 177 0 0 chr20 19602728 19602886 -47065119 + L1MB2 LINE L1 5599 5756 -415 762 186 0 0 chr20 19602887 19603005 -47065000 + FLAM_C SINE Alu 1 118 -15 2109 125 3 3 chr20 19603048 19603361 -47064644 + AluSq SINE Alu 1 313 0 6846 125 8 2 chr20 19603365 19605292 -47062713 + L1MA3 LINE L1 4249 6186 -119 990 100 0 0 chr20 19605292 19605422 -47062583 + AluSg SINE Alu 1 130 -180 1836 125 88 6 chr20 19605422 19605751 -47062254 + L1MB2 LINE L1 5814 6169 -2 281 280 59 51 chr20 19605988 19606106 -47061899 + MIR SINE MIR 129 247 -15 865 171 0 0 chr20 19606117 19606257 -47061748 + AluJo SINE Alu 6 145 -167 732 173 24 0 chr20 19606279 19606406 -47061599 + AluJo SINE Alu 121 250 -62 983 167 0 90 chr20 19606406 19606471 -47061534 + AluJo SINE Alu 85 154 -158 2315 73 3 7 chr20 19606471 19606773 -47061232 + AluSp SINE Alu 1 301 -12 983 167 0 90 chr20 19606773 19606940 -47061065 + AluJo SINE Alu 154 296 -16 300 227 133 16 chr20 19607778 19607906 -47060099 + L1ME4a LINE L1 5976 6118 -3 2821 185 43 30 chr20 19608192 19608802 -47059203 + L1MC4 LINE L1 7403 8020 -22 717 243 41 34 chr20 19609010 19609259 -47058746 - MIR SINE MIR -11 251 8 3070 112 14 40 chr20 19609348 19609848 -47058157 + L1MA6 LINE L1 5807 6293 -7 27 0 0 0 chr20 19609849 19609876 -47058129 + AT_rich Low_complexity Low_complexity 1 27 0 972 144 33 28 chr20 19609898 19609925 -47058080 - MER3 DNA MER1_type -28 181 156 1137 192 137 16 chr20 19609925 19610180 -47057825 + AluJo SINE Alu 1 286 -16 219 69 0 0 chr20 19610180 19610209 -47057796 + (TTAA)n Simple_repeat Simple_repeat 3 31 0 972 144 33 28 chr20 19610209 19610360 -47057645 - MER3 DNA MER1_type -52 157 1 656 95 0 0 chr20 19610764 19610848 -47057157 + AluS SINE Alu 2 85 -227 2015 142 0 0 chr20 19611200 19611502 -47056503 + AluSx SINE Alu 1 302 -10 251 333 0 0 chr20 19612127 19612205 -47055800 - L2 LINE L2 -6 3266 3189 3056 203 84 40 chr20 19612352 19612437 -47055568 + L1ME3 LINE L1 5317 5397 -765 2071 121 0 3 chr20 19612437 19612734 -47055271 + AluSx SINE Alu 1 296 -16 3056 203 84 40 chr20 19612734 19613216 -47054789 + L1ME3 LINE L1 5397 5933 -229 1703 167 0 28 chr20 19613216 19613534 -47054471 + AluJo SINE Alu 1 309 -3 3056 203 84 40 chr20 19613534 19613774 -47054231 + L1ME3 LINE L1 5933 6161 -1 262 266 85 21 chr20 19614297 19614391 -47053614 + MER5B DNA MER1_type 1 100 -78 661 191 66 60 chr20 19614397 19614580 -47053425 + MER5A DNA MER1_type 3 186 -3 497 205 27 36 chr20 19614580 19614656 -47053349 - MER5A DNA MER1_type -112 77 3 594 90 27 99 chr20 19615343 19615382 -47052623 + U6 snRNA snRNA 1 41 -66 1864 129 42 0 chr20 19615382 19615669 -47052336 + AluSx SINE Alu 1 299 -13 594 90 27 99 chr20 19615669 19615740 -47052265 + U6 snRNA snRNA 41 103 -4 30 0 0 0 chr20 19615741 19615771 -47052234 + AT_rich Low_complexity Low_complexity 1 30 0 1478 221 45 141 chr20 19615870 19616225 -47051780 + L1ME2 LINE L1 5195 5582 -752 1823 170 0 6 chr20 19616225 19616537 -47051468 + AluJb SINE Alu 1 310 -2 1478 221 45 141 chr20 19616537 19617242 -47050763 + L1ME2 LINE L1 5582 6331 -3 2051 80 3 80 chr20 19617248 19617585 -47050420 + AluSx SINE Alu 1 311 -1 305 229 125 78 chr20 19617592 19617784 -47050221 + L1MDa LINE L1 1230 1430 -5110 365 306 64 17 chr20 19618342 19618515 -47049490 + L1MC4a LINE L1 5531 5711 -2097 2017 127 0 0 chr20 19618578 19618885 -47049120 - AluSq SINE Alu 0 307 1 2081 116 14 0 chr20 19618888 19619182 -47048823 - AluSx SINE Alu -14 298 1 297 81 177 0 chr20 19619209 19619271 -47048734 - MLT1A1 LTR MaLR -2 455 383 1329 158 9 4 chr20 19619289 19619517 -47048488 - AluJb SINE Alu -83 229 1 987 218 55 58 chr20 19619530 19619805 -47048200 - MLT1A1 LTR MaLR -68 297 24 365 248 44 29 chr20 19619852 19619989 -47048016 + L1MC4a LINE L1 5771 5909 -1899 2084 134 0 0 chr20 19619996 19620295 -47047710 - AluSx SINE Alu -13 299 1 1578 175 17 17 chr20 19620345 19620637 -47047368 + AluJb SINE Alu 1 292 -20 1000 154 0 0 chr20 19620668 19620817 -47047188 - AluSg/x SINE Alu -41 269 121 723 70 0 40 chr20 19620855 19620980 -47047025 + AluY SINE Alu 196 311 0 312 310 107 59 chr20 19621392 19621579 -47046426 + L1MC4a LINE L1 5989 6184 -1624 2080 90 4 0 chr20 19622466 19622744 -47045261 + AluSx SINE Alu 1 279 -33 180 77 0 0 chr20 19622744 19622770 -47045235 + (CA)n Simple_repeat Simple_repeat 1 26 0 803 160 240 65 chr20 19622770 19623030 -47044975 + MER41B LTR ERV1 105 443 -192 750 195 63 37 chr20 19623138 19623328 -47044677 + MER66A LTR ERV1 273 467 -11 591 264 128 16 chr20 19623336 19623586 -47044419 + L2 LINE L2 3035 3312 -1 1068 318 153 5 chr20 19623599 19624155 -47043850 - L2 LINE L2 -972 2342 1705 798 113 0 3 chr20 19624155 19624403 -47043602 + AluSx SINE Alu 1 311 -1 207 0 0 0 chr20 19624426 19624449 -47043556 + (TTTTTA)n Simple_repeat Simple_repeat 2 24 0 640 235 0 7 chr20 19624452 19624601 -47043404 + L1M4 LINE L1 4706 4853 -1293 1503 248 89 20 chr20 19624613 19625153 -47042852 - L1MC4 LINE L1 -21 8021 7445 724 308 56 90 chr20 19625159 19625606 -47042399 - L2 LINE L2 -1594 1720 1304 3172 154 44 40 chr20 19625606 19625907 -47042098 + L1MB2 LINE L1 5511 5809 -362 2182 115 3 0 chr20 19625907 19626211 -47041794 + AluSx SINE Alu 5 309 -3 3172 154 44 40 chr20 19626211 19626566 -47041439 + L1MB2 LINE L1 5809 6170 -1 724 308 56 90 chr20 19626566 19626816 -47041189 - L2 LINE L2 -2010 1304 1047 439 266 30 24 chr20 19626893 19627062 -47040943 + MLT1H LTR MaLR 107 276 -273 400 214 46 118 chr20 19627217 19627266 -47040739 - L1ME4a LINE L1 -220 5901 5850 2174 103 3 3 chr20 19627266 19627567 -47040438 + AluSx SINE Alu 1 301 -11 400 214 46 118 chr20 19627567 19627755 -47040250 - L1ME4a LINE L1 -271 5850 5681 1852 105 3 37 chr20 19627961 19628257 -47039748 + AluSx SINE Alu 1 286 -26 1022 257 91 35 chr20 19628268 19628673 -47039332 + MLT1H LTR MaLR 105 532 -17 1827 191 14 45 chr20 19628736 19628832 -47039173 + L1MD1 LINE L1 2 99 -5946 1430 162 63 21 chr20 19628832 19629116 -47038889 + AluJb SINE Alu 1 296 -16 1827 191 14 45 chr20 19629116 19629383 -47038622 + L1MD1 LINE L1 99 302 -5743 2083 133 0 0 chr20 19629383 19629685 -47038320 - AluSx SINE Alu -10 302 1 1827 191 14 45 chr20 19629685 19629766 -47038239 + L1MD1 LINE L1 302 384 -5661 4032 161 26 12 chr20 19629768 19630506 -47037499 + L1MC1 LINE L1 5586 6333 0 2452 44 7 0 chr20 19630514 19630812 -47037193 + AluY SINE Alu 2 301 -10 890 242 44 18 chr20 19630816 19631200 -47036805 + L1MD1 LINE L1 3456 3849 -2715 475 135 11 34 chr20 19631216 19631305 -47036700 + AluJ/FRAM SINE Alu 218 304 -8 4456 200 49 35 chr20 19631310 19631765 -47036240 + L1MD1 LINE L1 4858 5305 -1355 2179 75 4 0 chr20 19631765 19632077 -47035928 + AluSg SINE Alu 1 313 0 4456 200 49 35 chr20 19632077 19632336 -47035669 + L1MD1 LINE L1 5305 5559 -1101 1791 167 3 0 chr20 19632336 19632623 -47035382 + AluJo SINE Alu 1 288 -24 399 41 0 0 chr20 19632624 19632673 -47035332 + (TTA)n Simple_repeat Simple_repeat 2 50 0 4456 200 49 35 chr20 19632673 19633342 -47034663 + L1MD1 LINE L1 5559 6283 -377 1689 138 36 4 chr20 19633342 19633648 -47034357 + AluJb SINE Alu 1 315 0 4456 200 49 35 chr20 19633648 19634031 -47033974 + L1MD1 LINE L1 6283 6659 -1 357 242 146 63 chr20 19634009 19634169 -47033836 + HAL1 LINE L1 1487 1632 -1293 * 2273 188 50 45 chr20 19634169 19634602 -47033403 + MLT2B1 LTR ERVL 1 439 -81 2271 103 0 0 chr20 19634602 19634912 -47033093 + AluSx SINE Alu 1 310 -2 2273 188 50 45 chr20 19634912 19634995 -47033010 + MLT2B1 LTR ERVL 439 520 0 357 242 146 63 chr20 19634995 19635169 -47032836 + HAL1 LINE L1 1632 1849 -1076 423 283 42 0 chr20 19635191 19635236 -47032769 - HAL1 LINE L1 -2228 279 237 212 59 29 0 chr20 19635236 19635270 -47032735 + (CCCCCG)n Simple_repeat Simple_repeat 2 36 0 423 283 42 0 chr20 19635270 19635344 -47032661 - HAL1 LINE L1 -2270 237 155 372 332 41 32 chr20 19635949 19636169 -47031836 - L1MC4a LINE L1 -1867 5941 5720 944 247 39 48 chr20 19636193 19636460 -47031545 + MER5C DNA MER1_type 16 281 -43 2027 134 3 0 chr20 19636460 19636767 -47031238 + AluSx SINE Alu 3 310 -2 944 247 39 48 chr20 19636767 19636811 -47031194 + MER5C DNA MER1_type 281 324 0 205 283 38 0 chr20 19637887 19637940 -47030065 - L3 LINE CR1 -11 1566 1512 285 189 83 11 chr20 19637946 19638029 -47029976 + MIR SINE MIR 50 145 -63 932 271 43 8 chr20 19638155 19638410 -47029595 + LTR16C LTR ERVL 226 489 -2 2465 279 62 30 chr20 19638861 19639819 -47028186 + L1MC4a LINE L1 6789 7776 -32 252 327 72 20 chr20 19641026 19641179 -47026826 + MER5A DNA MER1_type 1 161 -28 280 275 97 47 chr20 19641567 19641956 -47026049 - MLT1K LTR MaLR -126 462 9 1393 132 0 9 chr20 19642416 19642635 -47025370 - AluJo SINE Alu -10 302 86 799 173 0 0 chr20 19642713 19642846 -47025159 - FLAM_C SINE Alu 0 133 1 270 0 0 0 chr20 19642906 19642936 -47025069 + (TG)n Simple_repeat Simple_repeat 2 31 0 200 256 120 105 chr20 19643121 19643254 -47024751 + MIR SINE MIR 11 145 -117 1529 230 74 9 chr20 19643259 19643638 -47024367 + MLT1H LTR MaLR 1 447 -102 1967 102 16 35 chr20 19643657 19643970 -47024035 + AluY SINE Alu 1 307 -4 899 231 156 54 chr20 19644010 19644383 -47023622 + L2 LINE L2 2903 3313 0 267 333 20 0 chr20 19645160 19645259 -47022746 - LTR16C LTR ERVL 0 491 391 409 278 9 28 chr20 19646908 19647016 -47020989 + MER5B DNA MER1_type 4 109 -69 214 260 130 14 chr20 19647027 19647173 -47020832 - L2 LINE L2 -338 2975 2813 525 202 13 178 chr20 19647188 19647340 -47020665 - MLT1G1 LTR MaLR -25 570 425 654 168 8 8 chr20 19647362 19647481 -47020524 - MER3 DNA MER1_type -5 204 86 925 111 7 0 chr20 19647496 19647631 -47020374 + AluJo SINE Alu 1 136 -176 718 205 58 0 chr20 19647652 19647823 -47020182 + MER53 DNA DNA 1 181 -8 340 268 12 0 chr20 19647835 19647917 -47020088 - MER3 DNA MER1_type -126 83 1 533 233 261 34 chr20 19647918 19648250 -47019755 - MLT1G1 LTR MaLR -208 382 10 496 283 64 16 chr20 19648260 19648447 -47019558 - L2 LINE L2 -492 2822 2627 1543 172 20 16 chr20 19649798 19650101 -47017904 + AluJo SINE Alu 9 312 0 583 230 143 0 chr20 19651436 19651597 -47016408 - AluJo SINE Alu -44 268 85 1574 142 96 36 chr20 19652947 19653250 -47014755 - MER1B DNA MER1_type -18 321 1 281 212 97 0 chr20 19653253 19653356 -47014649 + L1MC4 LINE L1 7471 7674 -321 889 128 0 0 chr20 19654658 19654791 -47013214 + AluSq/x SINE Alu 1 133 -180 3686 191 94 13 chr20 19655453 19656327 -47011678 + L1MA8 LINE L1 5347 6291 0 2457 53 0 0 chr20 19656428 19656727 -47011278 - AluY SINE Alu -12 299 1 22 35 0 0 chr20 19657488 19657517 -47010488 + AT_rich Low_complexity Low_complexity 1 29 0 1704 249 144 60 chr20 19658022 19659336 -47008669 + L1MC4 LINE L1 6521 8037 -5 356 70 0 0 chr20 19661609 19661652 -47006353 + MER4D LTR ERV1 760 802 -70 331 196 78 88 chr20 19662630 19662732 -47005273 + MER20 DNA MER1_type 66 166 -53 321 259 38 61 chr20 19662924 19663070 -47004935 - Charlie5 DNA MER1_type -2514 98 1 2378 74 0 0 chr20 19663824 19664123 -47003882 + AluY SINE Alu 1 299 -12 189 271 0 34 chr20 19665010 19665069 -47002936 + L2 LINE L2 3199 3255 -58 522 170 30 20 chr20 19665392 19665492 -47002513 + AluJb SINE Alu 11 111 -201 1735 149 0 4 chr20 19666596 19666877 -47001128 - AluSx SINE Alu -15 297 18 1320 156 67 73 chr20 19667645 19667959 -47000046 - AluJb SINE Alu 0 312 1 1134 123 8 2 chr20 19668341 19668585 -46999420 + AluSx SINE Alu 13 312 0 2257 77 6 13 chr20 19669036 19669349 -46998656 + AluY SINE Alu 1 311 0 180 0 0 0 chr20 19669885 19669905 -46998100 + (A)n Simple_repeat Simple_repeat 1 20 0 2061 88 16 42 chr20 19672060 19672195 -46995810 + AluSx SINE Alu 1 138 -174 2116 109 0 3 chr20 19672195 19672499 -46995506 + AluSg SINE Alu 1 303 -7 2061 88 16 42 chr20 19672499 19672670 -46995335 + AluSx SINE Alu 138 299 -13 23 0 0 0 chr20 19672737 19672760 -46995245 + AT_rich Low_complexity Low_complexity 1 23 0 2150 92 0 20 chr20 19674080 19674384 -46993621 - AluSg SINE Alu -12 298 1 1259 205 51 27 chr20 19675080 19675373 -46992632 + AluJo SINE Alu 2 301 -1 247 154 0 0 chr20 19675480 19675519 -46992486 - Alu SINE Alu -14 288 250 473 176 19 46 chr20 19675862 19675970 -46992035 + FLAM_A SINE Alu 34 138 -4 404 196 92 59 chr20 19677069 19677222 -46990783 + MER20 DNA MER1_type 58 215 -4 1293 143 0 10 chr20 19677319 19677570 -46990435 + AluJb SINE Alu 1 300 -12 1611 93 13 4 chr20 19678053 19678289 -46989716 + AluSg/x SINE Alu 66 303 -7 28 79 0 0 chr20 19680361 19680424 -46987581 + GC_rich Low_complexity Low_complexity 1 63 0 187 317 116 12 chr20 19681172 19681336 -46986669 + MIR SINE MIR 56 236 -26 21 0 0 0 chr20 19681528 19681549 -46986456 + AT_rich Low_complexity Low_complexity 1 21 0 387 271 102 0 chr20 19682391 19682509 -46985496 - MIR SINE MIR -51 211 82 1173 190 0 5 chr20 19683695 19683916 -46984089 - AluJb SINE Alu -90 222 3 25 0 0 0 chr20 19684312 19684337 -46983668 + AT_rich Low_complexity Low_complexity 1 25 0 1802 119 11 8 chr20 19684944 19685212 -46982793 + AluSq SINE Alu 1 269 -44 1519 149 56 31 chr20 19685247 19685535 -46982470 + AluJo SINE Alu 1 295 -17 271 293 171 39 chr20 19685685 19685866 -46982139 + MIR SINE MIR 26 230 -32 2242 99 7 0 chr20 19685943 19686246 -46981759 - AluSx SINE Alu -7 305 1 2312 93 7 0 chr20 19687158 19687460 -46980545 + AluSg SINE Alu 1 304 -6 2256 114 27 0 chr20 19688007 19688305 -46979700 - AluSx SINE Alu -6 306 1 2185 113 3 0 chr20 19688526 19688842 -46979163 - AluSp SINE Alu 0 317 1 3514 110 34 36 chr20 19688901 19688978 -46979027 - MER41C LTR ERV1 0 554 478 2361 110 3 0 chr20 19688978 19689286 -46978719 + AluSx SINE Alu 4 312 0 3514 110 34 36 chr20 19689286 19689763 -46978242 - MER41C LTR ERV1 -76 478 1 757 87 188 27 chr20 19689897 19690046 -46977959 - MER30 DNA MER1_type -57 173 1 2504 88 0 0 chr20 19690078 19690386 -46977619 - AluSq SINE Alu -5 308 1 2048 153 0 6 chr20 19690645 19690959 -46977046 - AluSx SINE Alu 0 312 1 1792 179 0 10 chr20 19690964 19691261 -46976744 - AluJb SINE Alu -18 294 1 2430 67 6 22 chr20 19691282 19691597 -46976408 - AluY SINE Alu -1 310 1 1638 191 11 3 chr20 19691605 19691912 -46976093 - AluJb SINE Alu 0 309 1 2264 109 0 0 chr20 19691914 19692207 -46975798 - AluSq SINE Alu -20 293 1 25 0 0 0 chr20 19692382 19692407 -46975598 + AT_rich Low_complexity Low_complexity 1 25 0 2499 77 0 0 chr20 19692409 19692706 -46975299 + AluY SINE Alu 1 297 -14 304 148 0 19 chr20 19692981 19693035 -46974970 - MER4D LTR ERV1 -60 812 760 577 304 143 4 chr20 19693149 19693379 -46974626 + MIR SINE MIR 1 262 0 601 151 71 48 chr20 19693392 19693518 -46974487 - FLAM_C SINE Alu 0 133 5 342 0 0 0 chr20 19693530 19693568 -46974437 + (TG)n Simple_repeat Simple_repeat 2 39 0 1809 124 56 11 chr20 19693568 19693834 -46974171 - AluSx SINE Alu -34 278 1 330 263 102 5 chr20 19693859 19693971 -46974034 - L1MC/D LINE L1 -320 5801 5685 2053 138 30 0 chr20 19694004 19694301 -46973704 - AluSq SINE Alu -7 306 1 299 134 134 0 chr20 19694536 19694603 -46973402 - L1MC/D LINE L1 -2372 5436 5361 5375 151 41 20 chr20 19694655 19695149 -46972856 - L1MA7 LINE L1 -3 6288 5806 315 0 0 0 chr20 19695149 19695184 -46972821 + (TG)n Simple_repeat Simple_repeat 2 36 0 5375 151 41 20 chr20 19695184 19696190 -46971815 - L1MA7 LINE L1 -485 5806 4747 1172 166 93 8 chr20 19696198 19696445 -46971560 + Tigger3(Golem) DNA MER2_type 1 268 -2761 4277 108 63 6 chr20 19696506 19696634 -46971371 + Tigger3(Golem) DNA MER2_type 2287 2406 -622 2194 136 0 7 chr20 19696634 19696944 -46971061 + AluSx SINE Alu 1 308 -4 4277 108 63 6 chr20 19696944 19697023 -46970982 + Tigger3(Golem) DNA MER2_type 2406 2479 -549 2231 121 3 0 chr20 19697023 19697320 -46970685 + AluSq SINE Alu 1 298 -15 4277 108 63 6 chr20 19697320 19697813 -46970192 + Tigger3(Golem) DNA MER2_type 2479 3028 0 1540 136 15 64 chr20 19697813 19697952 -46970053 - L1MA7 LINE L1 -1406 4740 4596 2374 101 0 0 chr20 19697952 19698249 -46969756 - AluSq SINE Alu -15 298 2 1742 145 62 10 chr20 19698253 19698542 -46969463 - AluJb SINE Alu -8 304 1 1540 136 15 64 chr20 19698542 19698732 -46969273 - L1MA7 LINE L1 -1553 4593 4419 2060 115 31 0 chr20 19698790 19699077 -46968928 + AluSx SINE Alu 11 306 -6 1133 163 58 83 chr20 19699163 19699518 -46968487 + MER33 DNA MER1_type 1 324 0 716 164 8 39 chr20 19699795 19699923 -46968082 + FLAM_A SINE Alu 8 131 -11 2264 113 0 26 chr20 19700241 19700551 -46967454 + AluSx SINE Alu 1 302 -10 1796 142 57 7 chr20 19700702 19700983 -46967022 + AluJb SINE Alu 1 295 -17 2076 121 7 0 chr20 19700985 19701265 -46966740 + AluSx SINE Alu 1 282 -30 297 0 0 0 chr20 19701270 19701303 -46966702 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 540 152 0 15 chr20 19701312 19701561 -46966444 + AluJo SINE Alu 1 298 -14 2549 53 0 0 chr20 19703147 19703447 -46964558 + AluY SINE Alu 1 300 -11 2125 120 40 0 chr20 19703714 19704014 -46963991 - AluSx SINE Alu 0 312 1 2078 133 10 7 chr20 19704382 19704676 -46963329 + AluSx SINE Alu 9 303 -9 24 32 0 0 chr20 19705014 19705045 -46962960 + AT_rich Low_complexity Low_complexity 1 31 0 1990 148 10 3 chr20 19705741 19706039 -46961966 + AluJb SINE Alu 1 300 -12 1458 192 43 17 chr20 19706113 19706246 -46961759 + AluJo SINE Alu 1 129 -183 2341 73 0 0 chr20 19706246 19706521 -46961484 + AluY SINE Alu 24 298 -13 1458 192 43 17 chr20 19706521 19706689 -46961316 + AluJo SINE Alu 129 310 -2 2261 112 0 10 chr20 19706701 19707005 -46961000 + AluSq SINE Alu 7 307 -6 248 238 62 0 chr20 19707277 19707357 -46960648 - L1MC/D LINE L1 -2056 5752 5668 706 207 89 69 chr20 19707389 19707447 -46960558 + MIR SINE MIR 52 107 -155 2555 50 0 7 chr20 19707447 19707749 -46960256 - AluY SINE Alu -11 300 1 706 207 89 69 chr20 19707749 19707893 -46960112 + MIR SINE MIR 107 258 -4 316 261 177 23 chr20 19707913 19708043 -46959962 - L1MC/D LINE L1 -479 5642 5493 2017 148 0 22 chr20 19708885 19709203 -46958802 + AluJb SINE Alu 1 311 -1 267 255 182 52 chr20 19709427 19709619 -46958386 + MIR SINE MIR 1 217 -45 1412 98 5 5 chr20 19709778 19710003 -46958002 + AluSg/x SINE Alu 96 320 0 2156 129 3 3 chr20 19710082 19710385 -46957620 - AluSx SINE Alu -9 303 1 2990 140 30 30 chr20 19710726 19711261 -46956744 - MLT2B3 LTR ERVL -19 535 1 639 297 90 35 chr20 19711339 19711824 -46956181 - L2 LINE L2 -104 3209 2695 793 121 9 9 chr20 19711828 19711944 -46956061 + AluJo/FLAM SINE Alu 1 116 -186 2021 107 32 21 chr20 19711944 19712268 -46955737 - AluSp SINE Alu 0 327 1 22 0 0 0 chr20 19712268 19712290 -46955715 + AT_rich Low_complexity Low_complexity 1 22 0 249 139 0 0 chr20 19712290 19712333 -46955672 + (GAA)n Simple_repeat Simple_repeat 2 44 0 183 129 0 0 chr20 19712334 19712365 -46955640 + (CAG)n Simple_repeat Simple_repeat 3 33 0 232 276 129 66 chr20 19712373 19712450 -46955555 - L2 LINE L2 -633 2681 2610 1263 229 35 44 chr20 19712450 19712790 -46955215 + MER58B DNA MER1_type 2 338 -3 232 276 129 66 chr20 19712790 19712998 -46955007 - L2 LINE L2 -704 2610 2378 1233 155 4 69 chr20 19713058 19713290 -46954715 + AluJb SINE Alu 85 301 -11 575 260 88 54 chr20 19713407 19713738 -46954267 - MLT1H LTR MaLR -196 353 12 422 252 49 16 chr20 19713743 19713866 -46954139 + MIR SINE MIR 75 201 -61 317 208 64 140 chr20 19713934 19714024 -46953981 + MER113 DNA MER1_type? 4 99 -422 2398 95 0 7 chr20 19714024 19714328 -46953677 - AluSc SINE Alu -7 302 1 317 208 64 140 chr20 19714328 19714359 -46953646 + MER113 DNA MER1_type? 99 131 -390 2446 97 3 0 chr20 19714359 19714669 -46953336 + AluSp SINE Alu 1 311 -2 317 208 64 140 chr20 19714669 19714796 -46953209 + MER113 DNA MER1_type? 131 234 -287 687 109 0 154 chr20 19714796 19714952 -46953053 + AluJb SINE Alu 2 133 -179 2221 102 3 3 chr20 19714953 19715268 -46952737 + AluSx SINE Alu 1 315 0 2181 108 36 0 chr20 19715268 19715547 -46952458 + AluSx SINE Alu 2 290 -22 288 270 133 39 chr20 19715549 19715782 -46952223 + MER113 DNA MER1_type? 224 478 -43 273 274 120 51 chr20 19715910 19716085 -46951920 + MIR SINE MIR 63 249 -13 1788 176 0 13 chr20 19716738 19717040 -46950965 - AluJo SINE Alu -14 298 1 376 250 206 0 chr20 19717315 19717495 -46950510 + LTR16C LTR ERVL 275 491 0 2213 127 0 9 chr20 19718287 19718602 -46949403 - AluSx SINE Alu 0 312 1 831 156 0 15 chr20 19718606 19718741 -46949264 - FLAM_C SINE Alu 0 133 1 597 280 61 31 chr20 19718751 19718945 -46949060 - L2 LINE L2 0 3313 3108 2276 112 7 3 chr20 19718945 19719250 -46948755 + AluSx SINE Alu 1 306 -6 597 280 61 31 chr20 19719250 19719316 -46948689 - L2 LINE L2 -205 3108 3045 710 238 78 135 chr20 19719316 19719830 -46948175 - MLT1H1 LTR MaLR 0 555 101 338 252 102 62 chr20 19719927 19720153 -46947852 - L2 LINE L2 -337 2977 2743 231 286 50 66 chr20 19720241 19720423 -46947582 + L2 LINE L2 3058 3236 -77 25 0 0 28 chr20 19720568 19720585 -46947420 + AT_rich Low_complexity Low_complexity 1 17 -18 2392 87 3 0 chr20 19720585 19720883 -46947122 - AluY SINE Alu -12 299 1 25 0 0 28 chr20 19720883 19720901 -46947104 + AT_rich Low_complexity Low_complexity 17 35 0 818 127 8 0 chr20 19721318 19721436 -46946569 - FLAM_A SINE Alu -3 139 21 6696 68 14 44 chr20 19721469 19722452 -46945553 - SVA Other Other 0 1386 433 1873 95 47 15 chr20 19722474 19722885 -46945120 - SVA Other Other -520 866 519 923 158 0 7 chr20 19722886 19723025 -46944980 - AluJo SINE Alu -169 143 6 210 94 0 0 chr20 19723029 19723061 -46944944 + L2 LINE L2 2453 2484 -830 1550 240 79 24 chr20 19723138 19723645 -46944360 + L2 LINE L2 2488 3022 -291 216 200 0 0 chr20 19723985 19724040 -46943965 + GA-rich Low_complexity Low_complexity 1 55 0 22 0 0 0 chr20 19724842 19724864 -46943141 + AT_rich Low_complexity Low_complexity 1 22 0 1785 141 67 7 chr20 19724956 19725239 -46942766 + AluJo SINE Alu 1 300 -12 700 237 94 84 chr20 19725296 19725379 -46942626 + MLT1G1 LTR MaLR 3 84 -506 2169 135 7 0 chr20 19725379 19725682 -46942323 - AluSx SINE Alu -7 305 1 700 237 94 84 chr20 19725682 19726107 -46941898 + MLT1G1 LTR MaLR 84 515 -75 632 228 117 61 chr20 19726146 19726343 -46941662 + L2 LINE L2 3106 3313 0 250 290 52 52 chr20 19726476 19726653 -46941352 + L1P LINE L1 4926 5102 -1044 201 150 0 25 chr20 19726672 19726685 -46941320 + (GAAA)n Simple_repeat Simple_repeat 2 14 -26 859 120 23 23 chr20 19726685 19726818 -46941187 + FLAM_C SINE Alu 1 133 0 201 150 0 25 chr20 19726818 19726844 -46941161 + (GAAA)n Simple_repeat Simple_repeat 14 40 0 2587 69 0 0 chr20 19726921 19727227 -46940778 + AluSg SINE Alu 1 306 -4 522 228 114 15 chr20 19727349 19727416 -46940589 - MER2 DNA MER2_type -1 344 285 1885 155 76 0 chr20 19727416 19727706 -46940299 + AluJb SINE Alu 1 312 0 522 228 114 15 chr20 19727706 19727840 -46940165 - MER2 DNA MER2_type -60 285 123 843 164 0 0 chr20 19727841 19727963 -46940042 + FLAM_C SINE Alu 1 122 -11 219 114 0 0 chr20 19727973 19728008 -46939997 + (TG)n Simple_repeat Simple_repeat 2 36 0 319 183 0 118 chr20 19728008 19728090 -46939915 - L1MC4 LINE L1 -1376 6666 6595 397 228 22 43 chr20 19728167 19728259 -46939746 - L1MC4 LINE L1 -1339 6703 6614 354 304 36 0 chr20 19728191 19728301 -46939704 + L1MC4 LINE L1 6614 6703 -1339 * 656 125 8 94 chr20 19728302 19728344 -46939661 - MER2 DNA MER2_type -214 131 87 2079 128 3 3 chr20 19728344 19728641 -46939364 - AluJb SINE Alu -15 297 1 656 125 8 94 chr20 19728641 19728726 -46939279 - MER2 DNA MER2_type -258 87 15 582 277 94 9 chr20 19728731 19728955 -46939050 + L1MC/D LINE L1 5360 5602 -2206 331 229 83 55 chr20 19729012 19729121 -46938884 + L1MC4a LINE L1 5274 5385 -2423 844 251 20 0 chr20 19729130 19729333 -46938672 + L1MC4a LINE L1 5620 5826 -1982 1214 124 6 0 chr20 19729336 19729505 -46938500 - AluSg/x SINE Alu -14 296 127 23 0 0 0 chr20 19729601 19729624 -46938381 + AT_rich Low_complexity Low_complexity 1 23 0 258 264 6 99 chr20 19729624 19729806 -46938199 + L1MC4a LINE L1 5876 6040 -1768 1193 170 179 20 chr20 19730067 19730408 -46937597 + LTR16A1 LTR ERVL 63 457 0 1023 251 82 35 chr20 19731022 19731333 -46936672 + LTR16C LTR ERVL 104 436 -55 2439 82 7 0 chr20 19731333 19731636 -46936369 - AluSq SINE Alu -8 305 1 1023 251 82 35 chr20 19731636 19731690 -46936315 + LTR16C LTR ERVL 436 486 -5 238 255 174 27 chr20 19731926 19732075 -46935930 + MLT1J2 LTR MaLR 258 428 -22 369 94 0 0 chr20 19732085 19732163 -46935842 - AluSc SINE Alu 0 304 227 827 105 0 0 chr20 19732163 19732268 -46935737 - AluSq/x SINE Alu -207 105 1 875 275 139 28 chr20 19732296 19732791 -46935214 + MLT1K LTR MaLR 23 572 -16 277 266 16 0 chr20 19733649 19733713 -46934292 + GA-rich Low_complexity Low_complexity 1 65 0 275 305 29 0 chr20 19733929 19734103 -46933902 + (TGG)n Simple_repeat Simple_repeat 2 180 0 290 295 35 0 chr20 19734292 19734465 -46933540 + (TGG)n Simple_repeat Simple_repeat 2 180 0 1531 148 0 0 chr20 19735709 19735919 -46932086 + AluJb SINE Alu 86 295 -17 219 154 0 26 chr20 19736500 19736539 -46931466 + CT-rich Low_complexity Low_complexity 2 39 0 243 0 0 0 chr20 19737036 19737063 -46930942 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2186 100 7 3 chr20 19737168 19737458 -46930547 + AluSx SINE Alu 1 291 -21 1205 255 99 15 chr20 19737458 19737862 -46930143 - LTR16C LTR ERVL -4 487 50 368 268 56 73 chr20 19738152 19738265 -46929740 + MER5B DNA MER1_type 1 111 -67 2525 67 0 0 chr20 19738265 19738563 -46929442 - AluY SINE Alu -13 298 1 368 268 56 73 chr20 19738563 19738628 -46929377 + MER5B DNA MER1_type 111 176 -2 1278 128 10 5 chr20 19738791 19738994 -46929011 + L1PA16 LINE L1 5953 6156 -10 2018 115 0 0 chr20 19739135 19739453 -46928552 + AluSx SINE Alu 8 325 0 2348 70 0 0 chr20 19739476 19739777 -46928228 - AluY SINE Alu -10 301 1 1908 140 0 0 chr20 19740041 19740359 -46927646 - AluSx SINE Alu 0 318 1 22 0 0 0 chr20 19740371 19740393 -46927612 + AT_rich Low_complexity Low_complexity 1 22 0 1849 145 0 0 chr20 19740393 19740710 -46927295 + AluSx SINE Alu 1 317 0 2067 114 0 7 chr20 19740905 19741211 -46926794 - AluSx SINE Alu -8 304 1 322 218 26 13 chr20 19741245 19741323 -46926682 + MER5B DNA MER1_type 95 173 -5 1809 127 13 10 chr20 19741583 19741882 -46926123 + AluJo SINE Alu 5 304 -8 227 154 19 0 chr20 19741888 19741940 -46926065 - MER96B DNA MER1_type? -71 346 294 1491 106 0 22 chr20 19743254 19743480 -46924525 + AluSg/x SINE Alu 83 303 -9 418 266 59 49 chr20 19743887 19744090 -46923915 + L1ME3A LINE L1 5533 5737 -2071 183 80 0 0 chr20 19744090 19744115 -46923890 + (GGAA)n Simple_repeat Simple_repeat 1 25 0 684 167 22 22 chr20 19744118 19744298 -46923707 + GA-rich Low_complexity Low_complexity 1 180 0 2104 107 0 0 chr20 19744376 19744689 -46923316 - AluSx SINE Alu 0 312 1 194 278 0 42 chr20 19745536 19745608 -46922397 - MER5A DNA MER1_type -112 77 9 529 228 201 69 chr20 19745985 19746389 -46921616 + LTR16A1 LTR ERVL 1 457 0 255 125 0 0 chr20 19746494 19746534 -46921471 + (TC)n Simple_repeat Simple_repeat 2 41 0 189 0 0 0 chr20 19746534 19746555 -46921450 + (CA)n Simple_repeat Simple_repeat 1 21 0 1853 141 0 22 chr20 19747054 19747367 -46920638 + AluSx SINE Alu 4 309 -3 954 241 28 34 chr20 19747717 19747894 -46920111 - MER33 DNA MER1_type -2262 323 147 2207 105 3 0 chr20 19747894 19748198 -46919807 + AluSp SINE Alu 1 305 -8 954 241 28 34 chr20 19748198 19748344 -46919661 - MER33 DNA MER1_type -2438 147 2 2570 36 0 0 chr20 19748737 19749044 -46918961 + AluY SINE Alu 1 307 -4 307 301 191 0 chr20 19749144 19749280 -46918725 + MIR SINE MIR 20 181 -81 864 224 40 18 chr20 19749613 19749836 -46918169 + LTR16C LTR ERVL 264 491 0 275 337 11 0 chr20 19749848 19749940 -46918065 + L2 LINE L2 2962 3054 -218 313 250 117 61 chr20 19750159 19750355 -46917650 - MIR SINE MIR 0 262 56 1005 229 39 36 chr20 19750923 19751203 -46916802 + L1ME3A LINE L1 5884 6164 -6 1618 138 81 34 chr20 19751222 19751520 -46916485 + AluJo SINE Alu 1 312 0 1732 162 7 3 chr20 19751810 19752106 -46915899 - AluJo SINE Alu -15 297 1 429 232 0 0 chr20 19752154 19752296 -46915709 + (GGATG)n Simple_repeat Simple_repeat 4 145 0 214 350 88 0 chr20 19752356 19752493 -46915512 - L2 LINE L2 -527 2787 2639 352 283 17 8 chr20 19752908 19753028 -46914977 - MIR SINE MIR -114 148 28 1887 73 4 8 chr20 19753043 19753290 -46914715 - AluSg SINE Alu -9 301 56 2183 113 0 7 chr20 19753786 19754095 -46913910 - AluSq SINE Alu -6 307 1 498 195 412 19 chr20 19754095 19754187 -46913818 + MLT1J LTR MaLR 17 72 -439 2238 147 55 29 chr20 19754187 19754377 -46913628 + MSTB LTR MaLR 1 184 -242 2243 90 7 0 chr20 19754377 19754677 -46913328 + AluSp SINE Alu 1 302 -11 2238 147 55 29 chr20 19754677 19754901 -46913104 + MSTB LTR MaLR 184 426 0 498 195 412 19 chr20 19754901 19755070 -46912935 + MLT1J LTR MaLR 72 381 -130 696 240 183 50 chr20 19755151 19755534 -46912471 + MLT1H1 LTR MaLR 45 478 -77 194 276 58 35 chr20 19755554 19755641 -46912364 - MIR SINE MIR -99 109 21 434 255 161 25 chr20 19755987 19756148 -46911857 - MER5A DNA MER1_type 0 189 7 349 267 184 53 chr20 19756441 19756816 -46911189 - L2 LINE L2 -11 3261 2838 808 145 0 15 chr20 19757519 19757650 -46910355 - FLAM_C SINE Alu -3 140 12 194 186 23 23 chr20 19757815 19757858 -46910147 - MIR SINE MIR -113 149 107 357 178 84 0 chr20 19758145 19758252 -46909753 + L1MC4a LINE L1 5710 5825 -1983 539 200 156 11 chr20 19758266 19758478 -46909527 + MLT1F LTR MaLR 299 536 -6 276 337 22 0 chr20 19758847 19758939 -46909066 + MIR3 SINE MIR 74 167 -41 415 245 37 98 chr20 19758943 19759106 -46908899 + MIR SINE MIR 2 154 -108 2104 114 10 0 chr20 19759116 19759415 -46908590 + AluSq SINE Alu 4 305 -8 2332 100 0 0 chr20 19759454 19759764 -46908241 + AluSx SINE Alu 1 310 -2 2077 112 10 0 chr20 19759888 19760184 -46907821 + AluSx SINE Alu 1 299 -13 595 268 34 64 chr20 19760276 19760327 -46907678 + MER46C DNA MER2_type 2 53 -285 1580 152 76 0 chr20 19760327 19760615 -46907390 + AluSx SINE Alu 1 308 0 595 268 34 64 chr20 19760615 19760797 -46907208 + MER46C DNA MER2_type 53 229 -109 291 296 46 28 chr20 19761548 19761656 -46906349 - MIR SINE MIR -129 133 24 231 269 134 60 chr20 19761850 19761984 -46906021 + MIR3 SINE MIR 33 176 -32 231 158 88 18 chr20 19762349 19762406 -46905599 + LTR67 LTR ERVL 481 541 -16 779 192 0 0 chr20 19762977 19763107 -46904898 + FLAM_C SINE Alu 2 131 -2 777 250 47 55 chr20 19763118 19763482 -46904523 + L1MC5 LINE L1 6957 7317 -644 647 240 36 26 chr20 19763498 19763629 -46904376 + MER3 DNA MER1_type 3 138 -71 1990 106 0 24 chr20 19763629 19763922 -46904083 - AluSx SINE Alu -26 286 1 647 240 36 26 chr20 19763922 19763982 -46904023 + MER3 DNA MER1_type 138 196 -13 1217 246 165 11 chr20 19763987 19764447 -46903558 + L1MC5 LINE L1 7334 7864 -97 387 314 58 0 chr20 19765155 19765292 -46902713 - MIR SINE MIR -48 214 70 2150 106 0 3 chr20 19765301 19765602 -46902403 + AluSx SINE Alu 1 300 -12 603 174 99 0 chr20 19766032 19766153 -46901852 - MIR SINE MIR -69 193 61 2143 80 3 71 chr20 19766343 19766679 -46901326 + AluSp SINE Alu 1 313 0 222 255 7 57 chr20 19768427 19768568 -46899437 + G-rich Low_complexity Low_complexity 1 134 0 243 146 0 0 chr20 19768715 19768756 -46899249 + (CTG)n Simple_repeat Simple_repeat 3 43 0 21 0 0 0 chr20 19769686 19769707 -46898298 + GC_rich Low_complexity Low_complexity 1 21 0 1555 214 20 3 chr20 19770283 19770634 -46897371 - THE1-int LTR MaLR -449 1131 775 2171 176 43 6 chr20 19770734 19771206 -46896799 - L1MC1 LINE L1 -482 5851 5384 693 232 5 60 chr20 19771478 19771663 -46896342 - FRAM SINE Alu -1 175 1 1811 130 10 30 chr20 19771673 19771832 -46896173 - AluSx SINE Alu -18 294 142 1979 128 3 3 chr20 19771832 19772137 -46895868 - AluSx SINE Alu -7 305 1 1811 130 10 30 chr20 19772137 19772277 -46895728 - AluSx SINE Alu -170 142 1 255 146 0 0 chr20 19772481 19772529 -46895476 - AluSc SINE Alu 0 299 252 833 121 0 0 chr20 19772529 19772653 -46895352 - AluSq/x SINE Alu -189 124 1 1171 150 0 5 chr20 19773327 19773514 -46894491 - MER46B DNA MER2_type -3 233 48 2224 66 0 3 chr20 19773518 19773804 -46894201 - AluY SINE Alu -1 310 26 654 202 16 8 chr20 19773823 19773947 -46894058 - FLAM_C SINE Alu -7 126 2 463 146 79 0 chr20 19773951 19774040 -46893965 - MER46B DNA MER2_type -183 53 83 323 199 99 84 chr20 19774342 19774473 -46893532 - Charlie1a DNA MER1_type -6 1449 1317 914 261 179 11 chr20 19774544 19774798 -46893207 - Charlie1a DNA MER1_type -1547 1214 1004 1661 179 20 0 chr20 19774798 19775100 -46892905 + AluJb SINE Alu 1 308 -4 914 261 179 11 chr20 19775100 19775281 -46892724 - Charlie1a DNA MER1_type -1757 1004 706 * 1205 269 80 56 chr20 19775275 19775815 -46892190 - Charlie1a DNA MER1_type -902 553 1 213 39 0 0 chr20 19776023 19776049 -46891956 + (T)n Simple_repeat Simple_repeat 1 26 0 541 220 18 0 chr20 19776153 19776262 -46891743 + MIR SINE MIR 64 174 -88 1822 129 0 45 chr20 19777738 19777930 -46890075 - AluSq SINE Alu -17 296 122 2346 80 0 6 chr20 19777930 19778241 -46889764 - AluY SINE Alu -2 309 1 1822 129 0 45 chr20 19778241 19778358 -46889647 - AluSq SINE Alu -191 122 1 1013 196 10 14 chr20 19778455 19778664 -46889341 + AluJo SINE Alu 1 208 -104 34 0 0 0 chr20 19778764 19778798 -46889207 + AT_rich Low_complexity Low_complexity 1 34 0 1952 197 128 65 chr20 19779094 19779551 -46888454 + L1ME2 LINE L1 4651 5078 -1086 1603 171 0 38 chr20 19779551 19779867 -46888138 + AluJo SINE Alu 9 312 0 1952 197 128 65 chr20 19779867 19779973 -46888032 + L1ME2 LINE L1 5078 5176 -988 2316 72 3 7 chr20 19779973 19780278 -46887727 + AluY SINE Alu 1 304 -7 1952 197 128 65 chr20 19780278 19780462 -46887543 + L1ME2 LINE L1 5176 5347 -817 1626 174 3 16 chr20 19780462 19780767 -46887238 + AluSx SINE Alu 3 303 -9 1871 97 45 39 chr20 19780776 19780881 -46887124 + AluSp SINE Alu 1 104 -209 2282 48 7 3 chr20 19780881 19781170 -46886835 + AluY SINE Alu 1 290 -21 1871 97 45 39 chr20 19781170 19781373 -46886632 + AluSp SINE Alu 104 311 -2 1952 197 128 65 chr20 19781373 19781784 -46886221 + L1ME2 LINE L1 5354 5899 -265 2056 128 0 7 chr20 19781938 19782244 -46885761 + AluSx SINE Alu 7 310 -2 859 211 0 0 chr20 19782257 19782423 -46885582 + AluJb SINE Alu 133 298 -14 216 348 22 11 chr20 19782869 19782961 -46885044 + L2 LINE L2 3220 3312 -1 2129 117 0 0 chr20 19782974 19783283 -46884722 + AluSx SINE Alu 1 309 -3 1218 111 0 11 chr20 19783283 19783464 -46884541 + AluSg/x SINE Alu 134 312 0 2043 120 3 0 chr20 19783485 19783786 -46884219 + AluSq SINE Alu 1 302 -11 21 36 0 0 chr20 19784581 19784609 -46883396 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 19785674 19785697 -46882308 + AT_rich Low_complexity Low_complexity 1 23 0 1658 173 17 3 chr20 19786128 19786428 -46881577 + AluJo SINE Alu 1 304 -8 21 71 0 0 chr20 19787089 19787131 -46880874 + AT_rich Low_complexity Low_complexity 1 42 0 722 149 130 13 chr20 19787470 19787624 -46880381 + MER2 DNA MER2_type 65 236 -109 * 1048 177 45 36 chr20 19787622 19787728 -46880277 + MER2 DNA MER2_type 120 224 -121 2350 66 3 0 chr20 19787728 19788029 -46879976 + AluY SINE Alu 1 302 -9 1048 177 45 36 chr20 19788029 19788142 -46879863 + MER2 DNA MER2_type 224 341 -4 875 181 100 35 chr20 19788168 19788428 -46879577 - L1MC4a LINE L1 -1371 6437 6161 2147 100 17 10 chr20 19788568 19788868 -46879137 + AluSq SINE Alu 1 302 -11 22 0 0 0 chr20 19788962 19788984 -46879021 + AT_rich Low_complexity Low_complexity 1 22 0 621 250 81 17 chr20 19788984 19789156 -46878849 - MER5A DNA MER1_type 0 189 7 2571 44 3 0 chr20 19789164 19789461 -46878544 + AluSp SINE Alu 1 298 -15 25 31 0 0 chr20 19790865 19790897 -46877108 + AT_rich Low_complexity Low_complexity 1 32 0 1652 168 14 24 chr20 19791804 19792096 -46875909 + AluJo SINE Alu 1 289 -23 2284 116 0 0 chr20 19792101 19792411 -46875594 + AluSq SINE Alu 1 310 -3 2134 118 0 7 chr20 19792417 19792706 -46875299 + AluSx SINE Alu 1 287 -25 26 0 0 0 chr20 19792707 19792733 -46875272 + AT_rich Low_complexity Low_complexity 1 26 0 2135 100 0 48 chr20 19794162 19794307 -46873698 + AluSg SINE Alu 1 125 -185 2325 90 3 7 chr20 19794307 19794617 -46873388 + AluSc SINE Alu 1 309 0 2135 100 0 48 chr20 19794617 19794780 -46873225 + AluSg SINE Alu 125 294 -16 455 178 28 161 chr20 19795063 19795194 -46872811 - MER58B DNA MER1_type -2079 341 239 206 32 32 0 chr20 19795194 19795225 -46872780 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 455 178 28 161 chr20 19795225 19795273 -46872732 - MER58B DNA MER1_type -2181 239 186 992 187 43 66 chr20 19795490 19795747 -46872258 + AluJo SINE Alu 23 273 -39 217 308 131 19 chr20 19795957 19796064 -46871941 + MER5B DNA MER1_type 60 178 0 594 191 122 0 chr20 19796213 19796328 -46871677 + FLAM_A SINE Alu 1 129 -4 2388 110 0 0 chr20 19796701 19797010 -46870995 + AluSq SINE Alu 1 309 -4 261 0 0 0 chr20 19798029 19798058 -46869947 + (CA)n Simple_repeat Simple_repeat 2 30 0 27 49 0 0 chr20 19798448 19798489 -46869516 + AT_rich Low_complexity Low_complexity 1 41 0 2351 105 0 0 chr20 19798826 19799122 -46868883 + AluSx SINE Alu 1 296 -16 307 203 166 31 chr20 19799275 19799438 -46868567 + L1MC5 LINE L1 7659 7843 -118 2019 122 44 0 chr20 19800247 19800542 -46867463 + AluSx SINE Alu 1 308 -4 255 118 0 0 chr20 19800971 19801026 -46866979 - Alu SINE Alu 0 302 248 330 26 0 0 chr20 19802301 19802340 -46865665 + (GGA)n Simple_repeat Simple_repeat 1 39 0 292 259 0 37 chr20 19802836 19802944 -46865061 - L1M4 LINE L1 -2871 3275 3172 3272 144 19 0 chr20 19803043 19803564 -46864441 + L1PA16 LINE L1 5524 6054 -112 2040 150 3 0 chr20 19803564 19803871 -46864134 - AluSx SINE Alu -4 308 1 1131 97 26 7 chr20 19804680 19804834 -46863171 - AluSg SINE Alu -153 157 1 1040 98 0 46 chr20 19804836 19804888 -46863117 + MER51B-int LTR ERV1 6086 6139 -1677 2363 95 0 3 chr20 19804888 19805194 -46862811 + AluY SINE Alu 2 306 -5 1040 98 0 46 chr20 19805194 19805315 -46862690 + MER51B-int LTR ERV1 6139 6251 -1565 1590 135 0 4 chr20 19805316 19805545 -46862460 + MER51B-int LTR ERV1 7578 7805 -11 1610 109 157 4 chr20 19805557 19805824 -46862181 + MER51B LTR ERV1 1 308 -69 2510 62 3 0 chr20 19806072 19806364 -46861641 + AluY SINE Alu 1 293 -18 2335 92 0 10 chr20 19806594 19806898 -46861107 + AluSx SINE Alu 1 301 -11 1159 159 0 10 chr20 19807028 19807223 -46860782 + AluSg/x SINE Alu 118 310 0 2099 136 0 0 chr20 19807851 19808146 -46859859 + AluSx SINE Alu 4 298 -14 1309 189 62 38 chr20 19808178 19808309 -46859696 + AluJo SINE Alu 6 132 -180 2447 73 0 10 chr20 19808309 19808609 -46859396 + AluSg SINE Alu 1 297 -13 1309 189 62 38 chr20 19808609 19808768 -46859237 + AluJo SINE Alu 132 303 -9 2119 106 3 14 chr20 19809878 19810170 -46857835 + AluSg SINE Alu 1 289 -21 1791 114 24 4 chr20 19810430 19810676 -46857329 + AluSg SINE Alu 1 251 -59 1663 101 14 0 chr20 19810776 19810994 -46857011 - AluSq SINE Alu -92 221 1 782 273 44 55 chr20 19811485 19811848 -46856157 - L3 LINE CR1 -7 1570 1212 2377 79 0 3 chr20 19811973 19812264 -46855741 - AluSp SINE Alu -18 295 6 485 288 42 71 chr20 19812357 19812591 -46855414 + L1MD2 LINE L1 4078 4296 -1850 2330 88 3 3 chr20 19812591 19812886 -46855119 + AluSc SINE Alu 1 295 -14 485 288 42 71 chr20 19812886 19813058 -46854947 + L1MD2 LINE L1 4296 4472 -1674 885 184 0 11 chr20 19813063 19813242 -46854763 + AluJb SINE Alu 135 311 -1 945 260 92 64 chr20 19813248 19813891 -46854114 + L1MD2 LINE L1 4475 5155 -1015 2280 93 0 10 chr20 19813891 19814193 -46853812 + AluSc SINE Alu 1 299 -10 945 260 92 64 chr20 19814193 19814556 -46853449 + L1MD2 LINE L1 5155 5507 -663 260 263 5 116 chr20 19814592 19814790 -46853215 + L1MD2 LINE L1 5619 5794 -368 27 49 0 0 chr20 19814863 19814904 -46853101 + AT_rich Low_complexity Low_complexity 1 41 0 2175 117 3 0 chr20 19814969 19815269 -46852736 + AluSx SINE Alu 1 301 -11 1800 195 162 5 chr20 19815272 19815564 -46852441 + L1MD2 LINE L1 5807 6052 -307 222 37 0 0 chr20 19815564 19815591 -46852414 + (CA)n Simple_repeat Simple_repeat 2 28 0 1800 195 162 5 chr20 19815591 19815767 -46852238 + L1MD2 LINE L1 6052 6353 -6 994 109 7 0 chr20 19815850 19815997 -46852008 + L1MA4 LINE L1 6149 6296 -4 701 144 144 0 chr20 19816009 19816127 -46851878 + AluSx SINE Alu 2 136 -176 2149 133 3 7 chr20 19816768 19817076 -46850929 - AluSx SINE Alu -5 307 1 999 123 0 0 chr20 19817449 19817603 -46850402 - AluSp/q SINE Alu 0 309 156 2750 131 78 18 chr20 19817760 19818273 -46849732 - L1MA9 LINE L1 -10 6302 5759 1132 123 0 6 chr20 19818343 19818505 -46849500 + AluSx SINE Alu 130 290 -22 27 0 0 0 chr20 19818505 19818532 -46849473 + AT_rich Low_complexity Low_complexity 1 27 0 3509 124 3 13 chr20 19818541 19819150 -46848855 - L1MA9 LINE L1 -524 5788 5182 2413 92 0 0 chr20 19819158 19819461 -46848544 - AluSx SINE Alu -9 303 1 609 322 62 42 chr20 19819504 19820023 -46847982 + LTR67 LTR ERVL 2 530 -27 2229 87 31 3 chr20 19820180 19820467 -46847538 - AluSx SINE Alu -17 295 1 207 184 0 0 chr20 19820536 19820574 -46847431 + CT-rich Low_complexity Low_complexity 1 38 0 1116 151 26 93 chr20 19820630 19820890 -46847115 + MER33 DNA MER1_type 2 278 -2346 2918 13 0 0 chr20 19820890 19821204 -46846801 - AluYb8 SINE Alu -4 314 1 1000 180 0 6 chr20 19821213 19821380 -46846625 - FAM SINE Alu -9 166 1 1116 151 26 93 chr20 19821380 19821440 -46846565 + MER33 DNA MER1_type 286 340 -23 189 0 0 0 chr20 19821442 19821463 -46846542 + (TCCC)n Simple_repeat Simple_repeat 4 24 0 356 188 0 12 chr20 19821604 19821684 -46846321 + CT-rich Low_complexity Low_complexity 1 79 0 1964 134 14 3 chr20 19821684 19821976 -46846029 - AluSg SINE Alu -15 295 1 1608 207 16 76 chr20 19822185 19822620 -46845385 - MLT2B3 LTR ERVL -145 409 1 1916 115 66 28 chr20 19822692 19822980 -46845025 + AluSx SINE Alu 1 299 -13 251 286 0 0 chr20 19823069 19823132 -46844873 - MIR SINE MIR -97 165 103 2070 127 0 0 chr20 19823171 19823477 -46844528 - AluSx SINE Alu 0 306 1 257 200 173 13 chr20 19824015 19824090 -46843915 + MLT1K LTR MaLR 322 408 -180 2471 87 0 3 chr20 19824378 19824687 -46843318 + AluSx SINE Alu 1 308 -4 2306 115 0 0 chr20 19824692 19824997 -46843008 + AluSg SINE Alu 1 305 -5 1140 222 26 63 chr20 19825548 19825651 -46842354 - MER113 DNA MER1_type? -80 441 336 1952 158 0 7 chr20 19825651 19825969 -46842036 - AluJb SINE Alu 0 312 1 1140 222 26 63 chr20 19825969 19826212 -46841793 - MER113 DNA MER1_type? -185 336 108 1244 286 43 11 chr20 19826223 19826660 -46841345 - LTR16B LTR ERVL -11 453 3 824 188 10 69 chr20 19826802 19827004 -46841001 + MLT1D LTR MaLR 1 190 -315 2600 144 52 18 chr20 19827006 19827114 -46840891 + L1MA5 LINE L1 5780 5883 -417 2249 118 0 0 chr20 19827114 19827411 -46840594 + AluSq SINE Alu 1 297 -16 2600 144 52 18 chr20 19827411 19827760 -46840245 + L1MA5 LINE L1 5883 6253 -47 1353 126 0 0 chr20 19827764 19827947 -46840058 + AluJo SINE Alu 5 187 -125 247 93 37 0 chr20 19828075 19828106 -46839899 + GA-rich Low_complexity Low_complexity 2 37 -20 2488 81 0 7 chr20 19828106 19828414 -46839591 + AluY SINE Alu 1 306 -5 247 93 37 0 chr20 19828414 19828436 -46839569 + GA-rich Low_complexity Low_complexity 37 57 0 733 257 147 47 chr20 19828506 19828954 -46839051 + MLT1H1 LTR MaLR 63 555 0 218 234 0 0 chr20 19828965 19829012 -46838993 - MIR SINE MIR -110 152 106 1835 139 68 0 chr20 19829150 19829430 -46838575 + AluSx SINE Alu 1 299 -13 435 190 253 17 chr20 19829636 19829810 -46838195 - L1MC5 LINE L1 -36 7925 7711 306 198 77 55 chr20 19829820 19829911 -46838094 - L1MC5 LINE L1 -417 7544 7452 1602 93 5 14 chr20 19829918 19830132 -46837873 + AluSg/x SINE Alu 77 288 -24 258 264 77 0 chr20 19830232 19830323 -46837682 - L1MC5 LINE L1 -518 7443 7346 2364 87 7 0 chr20 19830325 19830624 -46837381 - AluSp SINE Alu -12 301 1 456 194 62 39 chr20 19830629 19830758 -46837247 - L1MC5 LINE L1 -781 7180 7049 359 316 24 24 chr20 19830793 19831005 -46837000 + L2 LINE L2 1001 1212 -2102 399 247 0 0 chr20 19831071 19831160 -46836845 + MER3 DNA MER1_type 96 184 -25 233 167 37 37 chr20 19831149 19831203 -46836802 - MER3 DNA MER1_type -144 65 12 * 364 263 138 76 chr20 19831220 19831692 -46836313 + L2 LINE L2 1289 1789 -1525 830 175 94 12 chr20 19831700 19831871 -46836134 + MER5A DNA MER1_type 1 185 -4 832 314 131 22 chr20 19831968 19832700 -46835305 + L2 LINE L2 2127 2938 -376 509 304 84 87 chr20 19833102 19833310 -46834695 + MLT1K LTR MaLR 76 284 -304 2254 125 3 3 chr20 19833310 19833622 -46834383 - AluSx SINE Alu 0 312 1 509 304 84 87 chr20 19833622 19833748 -46834257 + MLT1K LTR MaLR 284 409 -179 * 647 261 90 25 chr20 19833745 19833997 -46834008 - MLT1J2 LTR MaLR -121 329 65 2361 109 0 0 chr20 19834272 19834584 -46833421 + AluSx SINE Alu 1 312 0 1188 212 43 64 chr20 19834605 19834978 -46833027 + MLT1A1 LTR MaLR 1 365 0 548 232 107 30 chr20 19835069 19835142 -46832863 - L1M4 LINE L1 -3004 3142 3076 1645 160 35 42 chr20 19835142 19835311 -46832694 - AluJo SINE Alu -2 310 142 2393 99 0 0 chr20 19835311 19835614 -46832391 - AluSx SINE Alu -9 303 1 1645 160 35 42 chr20 19835614 19835756 -46832249 - AluJo SINE Alu -170 142 1 548 232 107 30 chr20 19835756 19835945 -46832060 - L1M4 LINE L1 -3070 3076 2860 291 134 30 75 chr20 19836933 19837000 -46831005 + L1MC3 LINE L1 7044 7107 -678 1306 223 32 10 chr20 19837003 19837312 -46830693 - MLT1D LTR MaLR -2 503 188 2355 87 0 3 chr20 19837313 19837611 -46830394 - AluSx SINE Alu -11 301 5 685 165 5 10 chr20 19837623 19837817 -46830188 + CT-rich Low_complexity Low_complexity 1 193 0 1220 148 38 5 chr20 19837817 19838026 -46829979 - AluSg/x SINE Alu -11 299 84 384 230 0 0 chr20 19838027 19838101 -46829904 - MLT1D LTR MaLR -317 188 115 2093 118 7 0 chr20 19838112 19838401 -46829604 + AluSp SINE Alu 1 291 -22 1959 162 0 0 chr20 19838405 19838707 -46829298 + AluSx SINE Alu 3 304 -8 1539 154 38 10 chr20 19838790 19839082 -46828923 + L1MA4 LINE L1 5997 6296 -4 23 0 0 0 chr20 19839239 19839262 -46828743 + AT_rich Low_complexity Low_complexity 1 23 0 1859 133 41 4 chr20 19839951 19840222 -46827783 - AluJo SINE Alu -31 281 1 2176 133 0 0 chr20 19840253 19840607 -46827398 + AluSx SINE Alu 1 354 0 26 50 0 0 chr20 19840651 19840691 -46827314 + AT_rich Low_complexity Low_complexity 1 40 0 232 231 0 19 chr20 19841443 19841495 -46826510 + C-rich Low_complexity Low_complexity 5 55 0 884 208 96 69 chr20 19841541 19841694 -46826311 + LTR16C LTR ERVL 199 363 -128 2411 56 0 7 chr20 19841694 19841996 -46826009 - AluY SINE Alu -9 302 3 884 208 96 69 chr20 19841996 19842102 -46825903 + LTR16C LTR ERVL 363 465 -26 654 285 155 24 chr20 19842162 19842587 -46825418 + MLT1K LTR MaLR 67 547 -41 1942 109 69 0 chr20 19842954 19843228 -46824777 + AluSx SINE Alu 1 293 -19 719 209 0 7 chr20 19843735 19843874 -46824131 + MER58B DNA MER1_type 203 340 -1 497 244 26 0 chr20 19843880 19843995 -46824010 - MER5A DNA MER1_type 0 189 72 2526 116 18 53 chr20 19843995 19844374 -46823631 + Tigger2a DNA MER2_type 1 363 -2345 2222 129 0 0 chr20 19844374 19844676 -46823329 + AluSx SINE Alu 1 302 -10 2526 116 18 53 chr20 19844676 19844746 -46823259 + Tigger2a DNA MER2_type 363 434 0 349 123 18 0 chr20 19844774 19844831 -46823174 - U7 snRNA snRNA -1 62 5 215 182 0 0 chr20 19844834 19844878 -46823127 - MER5A DNA MER1_type -116 73 30 423 0 0 0 chr20 19845098 19845145 -46822860 + (CA)n Simple_repeat Simple_repeat 2 48 0 270 241 0 120 chr20 19845145 19845253 -46822752 - MLT1I LTR MaLR -73 336 242 2119 117 3 46 chr20 19845295 19845621 -46822384 + AluSx SINE Alu 1 312 0 887 192 34 6 chr20 19845624 19845801 -46822204 - L1ME3A LINE L1 -7 6163 5982 4192 97 4 0 chr20 19845807 19846356 -46821649 + MER41A LTR ERV1 1 551 -3 844 180 11 55 chr20 19846365 19846548 -46821457 + FRAM SINE Alu 1 172 -4 236 115 231 0 chr20 19846548 19846600 -46821405 - L1ME3A LINE L1 -185 5985 5922 1346 221 35 81 chr20 19846661 19847095 -46820910 - L1ME3A LINE L1 -263 5907 5494 486 264 125 43 chr20 19847280 19847488 -46820517 + MER102b DNA MER1_type 107 331 -10 2267 107 3 7 chr20 19847708 19848018 -46819987 + AluSc SINE Alu 1 309 0 922 226 238 48 chr20 19848111 19848590 -46819415 - MLT1G LTR MaLR -2 588 19 2224 115 3 0 chr20 19848591 19848895 -46819110 - AluSp SINE Alu -8 305 1 2027 137 3 7 chr20 19848971 19849270 -46818735 - AluSq SINE Alu -15 298 1 241 348 165 0 chr20 19849293 19849408 -46818597 - L2 LINE L2 -33 3239 3106 2252 129 3 0 chr20 19849587 19849898 -46818107 - AluSx SINE Alu 0 312 1 2048 99 11 0 chr20 19850060 19850332 -46817673 + AluSp SINE Alu 35 309 -4 244 288 25 0 chr20 19850695 19850775 -46817230 + MLT1J LTR MaLR 424 505 -6 906 248 5 0 chr20 19850841 19851047 -46816958 - LTR16A1 LTR ERVL 0 457 251 228 248 128 23 chr20 19851104 19851237 -46816768 - LTR16A1 LTR ERVL -310 147 1 546 228 116 49 chr20 19851293 19851517 -46816488 + L1ME1 LINE L1 5451 5689 -473 762 141 7 22 chr20 19851585 19851720 -46816285 - MER7A DNA MER2_type -215 131 1 900 270 22 18 chr20 19851727 19852005 -46816000 + L1ME1 LINE L1 5847 6125 -41 1367 244 96 12 chr20 19852026 19852431 -46815574 + L1ME3 LINE L1 5678 6116 -46 2123 138 3 6 chr20 19852431 19852742 -46815263 - AluSx SINE Alu -2 310 1 2120 120 10 0 chr20 19853161 19853453 -46814552 + AluSx SINE Alu 1 295 -17 1878 164 0 0 chr20 19853465 19853752 -46814253 + AluJb SINE Alu 1 287 -25 2101 112 0 0 chr20 19854488 19854766 -46813239 + AluSq SINE Alu 1 278 -35 235 0 0 54 chr20 19854770 19854807 -46813198 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 2535 189 25 32 chr20 19855086 19855648 -46812357 - MER74A LTR ERVL 0 558 1 1365 118 32 79 chr20 19855906 19856180 -46811825 + MER33 DNA MER1_type 1 239 -2346 2070 104 58 0 chr20 19856180 19856458 -46811547 - AluSg SINE Alu -14 296 3 1365 118 32 79 chr20 19856458 19856501 -46811504 + MER33 DNA MER1_type 239 282 -42 6935 183 37 46 chr20 19856667 19856872 -46811133 - L1MC1 LINE L1 -5 6608 6403 2205 106 0 3 chr20 19856872 19857190 -46810815 - AluSx SINE Alu 0 317 1 6935 183 37 46 chr20 19857190 19858266 -46809739 - L1MC1 LINE L1 -210 6403 5319 755 208 0 0 chr20 19858266 19858396 -46809609 - FLAM_A SINE Alu -3 130 1 6935 183 37 46 chr20 19858396 19858789 -46809216 - L1MC1 LINE L1 -1294 5319 4924 1895 136 3 46 chr20 19858789 19858945 -46809060 - AluJb SINE Alu -23 289 151 1681 177 3 17 chr20 19858945 19859244 -46808761 - AluJb SINE Alu -17 295 1 1895 136 3 46 chr20 19859244 19859389 -46808616 - AluJb SINE Alu -161 151 1 6935 183 37 46 chr20 19859389 19860345 -46807660 - L1MC1 LINE L1 -1689 4924 3961 2186 135 0 0 chr20 19860345 19860656 -46807349 - AluSx SINE Alu -1 311 1 6935 183 37 46 chr20 19860656 19860799 -46807206 - L1MC1 LINE L1 -2652 3961 3859 2180 118 0 0 chr20 19860799 19861086 -46806919 + AluSx SINE Alu 8 294 -18 6935 183 37 46 chr20 19861086 19861201 -46806804 - L1MC1 LINE L1 -2754 3859 3745 750 187 0 0 chr20 19861201 19861637 -46806368 + (TA)n Simple_repeat Simple_repeat 1 436 0 1923 196 30 101 chr20 19861644 19861950 -46806055 - L1MC1 LINE L1 -2672 3754 3428 2108 129 0 28 chr20 19861950 19862268 -46805737 - AluSx SINE Alu -3 309 1 1923 196 30 101 chr20 19862268 19862305 -46805700 - L1MC1 LINE L1 -2998 3428 3390 2222 117 3 3 chr20 19862305 19862605 -46805400 - AluSq SINE Alu -12 301 2 1923 196 30 101 chr20 19862605 19862739 -46805266 - L1MC1 LINE L1 -3036 3390 3248 819 90 0 0 chr20 19862739 19862850 -46805155 - HY1 scRNA scRNA -1 111 1 1923 196 30 101 chr20 19862850 19863149 -46804856 - L1MC1 LINE L1 -3178 3248 3032 6871 123 25 6 chr20 19863157 19864410 -46803595 - L1MA2 LINE L1 0 6304 5024 5238 170 54 53 chr20 19864413 19864998 -46803007 - L1MC1 LINE L1 -3381 3045 2462 2360 96 17 0 chr20 19864998 19865299 -46802706 - AluSq SINE Alu -7 306 1 5238 170 54 53 chr20 19865299 19865671 -46802334 - L1MC1 LINE L1 -3964 2462 2092 2034 131 3 0 chr20 19865671 19865954 -46802051 + AluSx SINE Alu 13 296 -16 5238 170 54 53 chr20 19865954 19866145 -46801860 - L1MC1 LINE L1 -4334 2092 1903 2226 105 3 7 chr20 19866145 19866449 -46801556 + AluSx SINE Alu 1 303 -9 5238 170 54 53 chr20 19866449 19866565 -46801440 - L1MC1 LINE L1 -4523 1903 1789 1910 154 0 10 chr20 19866565 19866864 -46801141 + AluSx SINE Alu 11 306 -6 5238 170 54 53 chr20 19866864 19867464 -46800541 - L1MC1 LINE L1 -4637 1789 1178 1823 159 56 75 chr20 19867459 19867865 -46800140 - L1MC1 LINE L1 -5890 536 137 * 2782 10 0 0 chr20 19867865 19868163 -46799842 - AluY SINE Alu -13 298 1 961 240 59 59 chr20 19868304 19868536 -46799469 + Tigger1 DNA MER2_type 2031 2265 -153 2572 86 0 0 chr20 19868536 19868849 -46799156 - AluSq SINE Alu 0 313 1 961 240 59 59 chr20 19868849 19869004 -46799001 + Tigger1 DNA MER2_type 2264 2418 0 5650 244 45 10 chr20 19869005 19870669 -46797336 + L1MB4 LINE L1 2282 4013 -2133 1414 210 44 46 chr20 19870669 19871035 -46796970 + MLT1A1 LTR MaLR 1 365 0 5650 244 45 10 chr20 19871035 19871126 -46796879 + L1MB4 LINE L1 4013 4099 -2047 1934 112 11 28 chr20 19871133 19871420 -46796585 - AluSx SINE Alu -15 297 16 1999 120 3 3 chr20 19871520 19871812 -46796193 - AluSx SINE Alu -20 292 1 1123 171 11 0 chr20 19871822 19872003 -46796002 - AluSg/x SINE Alu -22 288 106 1795 103 84 7 chr20 19872003 19872276 -46795729 - AluSx SINE Alu -14 298 5 2169 119 7 0 chr20 19873254 19873556 -46794449 + AluSx SINE Alu 1 304 -8 1697 243 34 44 chr20 19873756 19873910 -46794095 + L1MB4 LINE L1 4538 4692 -1454 2204 115 20 0 chr20 19873910 19874205 -46793800 - AluSx SINE Alu -11 301 1 1697 243 34 44 chr20 19874205 19874614 -46793391 + L1MB4 LINE L1 4692 5095 -1051 * 4998 50 2 2 chr20 19874605 19875248 -46792757 - L1PA5 LINE L1 -2587 3559 2917 15272 48 4 13 chr20 19875248 19877875 -46790130 + L1PA5 LINE L1 3535 6154 0 1737 201 23 39 chr20 19877877 19878128 -46789877 + L1MB4 LINE L1 5079 5333 -850 2313 97 3 3 chr20 19878128 19878427 -46789578 + AluSp SINE Alu 1 299 -14 1737 201 23 39 chr20 19878427 19878611 -46789394 + L1MB4 LINE L1 5333 5500 -683 2824 106 41 10 chr20 19878611 19879026 -46788979 - MSTA LTR MaLR 0 428 1 1737 201 23 39 chr20 19879026 19879163 -46788842 + L1MB4 LINE L1 5500 5638 -545 233 194 0 104 chr20 19879164 19879231 -46788774 - Tigger5 DNA MER2_type -22 2301 2242 2259 109 0 0 chr20 19879236 19879530 -46788475 - AluSx SINE Alu -16 296 3 2123 115 35 0 chr20 19879532 19879820 -46788185 - AluSx SINE Alu -14 298 1 466 167 0 0 chr20 19879824 19879896 -46788109 + Tigger5 DNA MER2_type 2249 2320 -3 462 195 0 0 chr20 19879896 19879972 -46788033 - Tigger5 DNA MER2_type -2245 78 3 3096 150 17 9 chr20 19879972 19880505 -46787500 + L1MB4 LINE L1 5643 6179 -1 1631 274 102 24 chr20 19880684 19881290 -46786715 + HAL1b LINE L1 95 652 -696 2230 116 7 0 chr20 19881290 19881593 -46786412 + AluSx SINE Alu 1 305 -7 1631 274 102 24 chr20 19881593 19881689 -46786316 + HAL1b LINE L1 652 739 -609 2333 132 79 17 chr20 19881689 19882092 -46785913 + MSTA LTR MaLR 1 428 0 1631 274 102 24 chr20 19882092 19882141 -46785864 + HAL1b LINE L1 739 906 -442 236 118 59 20 chr20 19882264 19882280 -46785725 + GA-rich Low_complexity Low_complexity 1 15 -38 2054 146 13 0 chr20 19882280 19882581 -46785424 + AluSx SINE Alu 1 305 -7 236 118 59 20 chr20 19882581 19882615 -46785390 + GA-rich Low_complexity Low_complexity 15 53 0 4448 194 25 23 chr20 19882633 19883564 -46784441 + L1MC3 LINE L1 6171 7103 -682 236 219 0 16 chr20 19884891 19884955 -46783050 + A-rich Low_complexity Low_complexity 2 64 0 2456 95 0 0 chr20 19885090 19885396 -46782609 - AluSx SINE Alu -6 306 1 2097 118 38 0 chr20 19885457 19885746 -46782259 - AluSx SINE Alu -12 300 1 266 235 0 0 chr20 19885809 19885877 -46782128 + A-rich Low_complexity Low_complexity 1 68 0 1398 153 21 8 chr20 19886011 19886246 -46781759 + AluSg/x SINE Alu 75 312 0 996 84 65 39 chr20 19887192 19887373 -46780632 + AluSg/x SINE Alu 127 311 0 345 312 40 29 chr20 19889460 19889633 -46778372 + MER5B DNA MER1_type 4 178 0 378 0 0 0 chr20 19889689 19889731 -46778274 + (TG)n Simple_repeat Simple_repeat 2 43 0 293 244 33 33 chr20 19889858 19889948 -46778057 - MIR SINE MIR -3 259 170 2229 102 0 34 chr20 19890583 19890906 -46777099 + AluSx SINE Alu 1 312 0 1350 178 6 88 chr20 19890920 19891240 -46776765 - AluJb SINE Alu -18 294 1 21 0 0 0 chr20 19891443 19891464 -46776541 + AT_rich Low_complexity Low_complexity 1 21 0 2204 105 3 10 chr20 19891658 19891962 -46776043 + AluSx SINE Alu 1 302 -10 1007 120 114 0 chr20 19893513 19893671 -46774334 - AluSp SINE Alu -4 309 134 2406 92 3 10 chr20 19893671 19893985 -46774020 - AluSp SINE Alu -1 312 1 231 342 74 40 chr20 19894686 19894835 -46773170 - MER5B DNA MER1_type -24 154 1 331 280 76 8 chr20 19894865 19894983 -46773022 + L2 LINE L2 3144 3269 -3 2019 121 0 0 chr20 19895576 19895849 -46772156 + AluSx SINE Alu 23 295 -17 1699 152 35 21 chr20 19896314 19896433 -46771572 + AluJb SINE Alu 3 119 -193 2406 86 3 6 chr20 19896433 19896747 -46771258 + AluSp SINE Alu 1 313 0 1699 152 35 21 chr20 19896747 19896916 -46771089 + AluJb SINE Alu 119 295 -17 478 255 39 33 chr20 19896942 19897095 -46770910 - L2 LINE L2 0 3313 3160 29 28 0 0 chr20 19897616 19897652 -46770353 + AT_rich Low_complexity Low_complexity 1 36 0 2297 90 0 3 chr20 19897653 19897941 -46770064 - AluSx SINE Alu -25 287 1 224 197 131 0 chr20 19898535 19898596 -46769409 - L2 LINE L2 -16 3256 3188 2523 82 0 0 chr20 19898659 19898965 -46769040 - AluSq SINE Alu -7 306 1 1043 121 52 11 chr20 19899251 19899425 -46768580 - L1MB3 LINE L1 -1 6182 6002 1791 148 79 3 chr20 19899746 19900036 -46767969 + AluSx SINE Alu 1 312 0 196 250 18 36 chr20 19900129 19900185 -46767820 + MIR3 SINE MIR 104 158 -50 1496 137 76 36 chr20 19901091 19901244 -46766761 - AluJo SINE Alu -15 297 152 198 0 0 0 chr20 19901244 19901266 -46766739 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2224 101 0 0 chr20 19901266 19901552 -46766453 - AluSx SINE Alu -26 286 1 1496 137 76 36 chr20 19901552 19901674 -46766331 - AluJo SINE Alu -159 153 10 2428 84 3 0 chr20 19901777 19902075 -46765930 + AluSx SINE Alu 1 299 -13 669 210 0 8 chr20 19902217 19902341 -46765664 + FLAM_A SINE Alu 1 123 -10 2267 109 0 0 chr20 19902350 19902662 -46765343 + AluSx SINE Alu 1 312 0 871 230 176 15 chr20 19903773 19904108 -46763897 + MER113 DNA MER1_type? 46 434 -87 985 81 0 0 chr20 19904379 19904502 -46763503 - AluSx SINE Alu -23 287 165 1120 169 42 0 chr20 19904502 19904691 -46763314 - L1M4c LINE L1 -6168 216 20 641 231 59 0 chr20 19904732 19904901 -46763104 - MER104 DNA MER2_type -1 179 1 1108 135 6 0 chr20 19905083 19905239 -46762766 - AluSx SINE Alu -155 157 1 1184 193 24 0 chr20 19905416 19905623 -46762382 + L1M4c LINE L1 219 430 -5954 * 4883 165 22 3 chr20 19905615 19906465 -46761540 + L1MB3 LINE L1 5310 6175 -8 1552 186 181 8 chr20 19906588 19906986 -46761019 - MLT1C LTR MaLR 0 467 1 375 271 93 43 chr20 19906998 19907266 -46760739 - L1MC/D LINE L1 -481 5640 5459 1330 168 0 31 chr20 19907266 19907492 -46760513 - AluJb SINE Alu -7 305 87 2157 142 22 32 chr20 19907496 19907904 -46760101 - L1MB2 LINE L1 -1 6170 5767 2193 101 7 0 chr20 19908003 19908291 -46759714 - AluSq SINE Alu -23 290 1 452 243 27 0 chr20 19908835 19908946 -46759059 - MIR SINE MIR -32 230 117 506 249 25 103 chr20 19909632 19909913 -46758092 - L1MC5 LINE L1 -78 7883 7625 1782 133 56 7 chr20 19909960 19910246 -46757759 - AluSx SINE Alu -3 309 10 327 261 108 71 chr20 19910353 19910684 -46757321 - L1ME4a LINE L1 -94 6027 5710 729 178 0 0 chr20 19910684 19910802 -46757203 - FLAM_C SINE Alu -15 118 1 327 261 108 71 chr20 19910802 19910948 -46757057 - L1ME4a LINE L1 -411 5710 5534 2353 88 3 3 chr20 19910948 19911244 -46756761 + AluSx SINE Alu 1 296 -16 327 261 108 71 chr20 19911244 19911316 -46756689 - L1ME4a LINE L1 -587 5534 5466 482 146 36 45 chr20 19911316 19911426 -46756579 - AluJb SINE Alu -81 231 123 1411 145 8 13 chr20 19911623 19911858 -46756147 + MER46A DNA MER2_type 3 236 0 607 197 111 49 chr20 19913716 19913960 -46754045 - HAL1 LINE L1 -1043 1464 1206 927 188 69 69 chr20 19913964 19914182 -46753823 - MER58A DNA MER1_type -5 219 2 400 265 197 45 chr20 19914217 19914643 -46753362 - HAL1 LINE L1 -1854 653 163 1859 163 16 32 chr20 19914664 19914977 -46753028 - AluJo SINE Alu -4 308 1 590 196 27 0 chr20 19915380 19915492 -46752513 + MLT1C LTR MaLR 1 115 -352 * 1056 190 19 19 chr20 19915484 19915695 -46752310 + MLT1C LTR MaLR 256 466 -1 3364 101 140 16 chr20 19916099 19916662 -46751343 - LTR10E LTR ERV1 0 633 1 493 251 175 0 chr20 19916722 19916893 -46751112 - HAL1 LINE L1 -680 1827 1627 598 267 286 12 chr20 19916969 19917396 -46750609 - HAL1 LINE L1 -1807 700 157 414 256 60 41 chr20 19917571 19917837 -46750168 - L1M4 LINE L1 -3111 3035 2765 260 319 95 35 chr20 19918048 19918280 -46749725 - HAL1 LINE L1 -766 1741 1496 2117 136 0 0 chr20 19918301 19918595 -46749410 + AluSx SINE Alu 1 294 -18 2659 117 40 13 chr20 19918835 19919304 -46748701 - L1MCa LINE L1 -5010 1416 935 14528 124 27 12 chr20 19919308 19920597 -46747408 + Tigger1 DNA MER2_type 2 1270 -1148 2460 58 0 10 chr20 19920597 19920892 -46747113 - AluY SINE Alu -19 292 1 14528 124 27 12 chr20 19920892 19921585 -46746420 + Tigger1 DNA MER2_type 1270 2025 -393 2227 114 0 0 chr20 19921585 19921874 -46746131 + AluSx SINE Alu 1 289 -23 14528 124 27 12 chr20 19921874 19922159 -46745846 + Tigger1 DNA MER2_type 2025 2304 -114 2448 84 0 0 chr20 19922159 19922455 -46745550 - AluSg SINE Alu -14 296 1 937 141 16 76 chr20 19922457 19922641 -46745364 - AluJb SINE Alu -15 297 125 588 182 10 0 chr20 19922641 19922740 -46745265 + Tigger1 DNA MER2_type 2318 2417 -1 3932 175 109 4 chr20 19922741 19923570 -46744435 - L1MCa LINE L1 -5494 932 17 210 167 0 0 chr20 19923678 19923714 -46744291 + T-rich Low_complexity Low_complexity 1 36 0 3831 162 44 11 chr20 19923878 19924624 -46743381 - L1MB7 LINE L1 -9 6175 5405 2350 105 0 3 chr20 19924706 19925019 -46742986 - AluSq SINE Alu 0 313 2 1818 117 58 11 chr20 19925804 19926078 -46741927 + AluJb SINE Alu 13 299 -13 2274 111 3 0 chr20 19926078 19926375 -46741630 + AluSg SINE Alu 1 299 -11 675 277 119 37 chr20 19926375 19927011 -46740994 - L2 LINE L2 -39 3274 2575 613 230 118 45 chr20 19927118 19927536 -46740469 - MLT1H LTR MaLR 0 595 76 966 108 0 0 chr20 19928056 19928185 -46739820 + AluSg/x SINE Alu 176 304 -8 1316 130 72 2 chr20 19928185 19928412 -46739593 + THE1-int LTR MaLR 397 690 -961 2454 110 8 8 chr20 19928449 19928804 -46739201 - THE1A LTR MaLR 0 355 1 10831 96 50 8 chr20 19928804 19929921 -46738084 - THE1A-int LTR MaLR 0 1580 382 2335 116 0 0 chr20 19929921 19930224 -46737781 - AluSx SINE Alu -9 303 1 10831 96 50 8 chr20 19930224 19930622 -46737383 - THE1A-int LTR MaLR -1198 382 2 2155 124 14 33 chr20 19930623 19930985 -46737020 - THE1A LTR MaLR 0 355 1 29 0 0 0 chr20 19931225 19931254 -46736751 + AT_rich Low_complexity Low_complexity 1 29 0 2469 80 3 6 chr20 19931412 19931724 -46736281 - AluY SINE Alu 0 311 1 2151 139 0 0 chr20 19932167 19932477 -46735528 - AluSx SINE Alu -2 310 1 184 277 100 51 chr20 19934266 19934439 -46733566 - MIR3 SINE MIR -60 148 2 26 0 0 0 chr20 19935213 19935239 -46732766 + AT_rich Low_complexity Low_complexity 1 26 0 1562 186 51 0 chr20 19935282 19935556 -46732449 - AluJo SINE Alu -24 288 1 418 289 87 44 chr20 19939052 19939064 -46728941 - L1MC5 LINE L1 -37 7924 7914 1907 129 26 32 chr20 19939064 19939375 -46728630 - AluSx SINE Alu -3 309 1 418 289 87 44 chr20 19939375 19939729 -46728276 - L1MC5 LINE L1 -47 7914 7542 253 226 48 0 chr20 19940861 19940923 -46727082 + MIR SINE MIR 116 180 -82 203 345 0 0 chr20 19940932 19941016 -46726989 - MIR SINE MIR -169 93 10 187 300 29 0 chr20 19941062 19941132 -46726873 + L2 LINE L2 3175 3246 -26 930 208 9 61 chr20 19941820 19941890 -46726115 + MER63 DNA MER1_type 665 737 -323 2229 100 0 49 chr20 19941890 19942082 -46725923 - AluSq SINE Alu 0 313 142 2500 78 3 0 chr20 19942082 19942391 -46725614 - AluY SINE Alu -1 310 1 2229 100 0 49 chr20 19942391 19942527 -46725478 - AluSq SINE Alu -171 142 1 930 208 9 61 chr20 19942527 19942687 -46725318 + MER63 DNA MER1_type 737 883 -177 769 158 15 30 chr20 19942719 19942852 -46725153 - FLAM_C SINE Alu -12 131 1 271 156 133 44 chr20 19942864 19942954 -46725051 + MER63 DNA MER1_type 897 994 -68 3879 113 0 8 chr20 19943280 19943809 -46724196 - MER1A DNA MER1_type -1 526 2 10774 38 7 93 chr20 19943935 19945445 -46722560 + SVA Other Other 3 1383 -3 1936 112 28 7 chr20 19945541 19945826 -46722179 - AluSx SINE Alu -21 291 1 310 261 54 0 chr20 19946249 19946360 -46721645 - MIR SINE MIR -82 180 64 2043 117 10 36 chr20 19946436 19946603 -46721402 - AluSx SINE Alu -13 299 129 216 0 0 0 chr20 19946603 19946627 -46721378 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2097 113 0 11 chr20 19946627 19946911 -46721094 - AluSg SINE Alu -29 281 1 2043 117 10 36 chr20 19946911 19947049 -46720956 - AluSx SINE Alu -181 131 1 2594 55 3 3 chr20 19947060 19947370 -46720635 - AluY SINE Alu 0 311 2 2191 115 7 0 chr20 19947924 19948220 -46719785 + AluSx SINE Alu 1 298 -14 468 250 61 0 chr20 19948925 19949073 -46718932 - MIR SINE MIR -60 202 46 2154 123 0 10 chr20 19949431 19949740 -46718265 + AluSx SINE Alu 1 306 -6 2002 187 81 49 chr20 19949843 19950373 -46717632 - L1MC4 LINE L1 -5 8037 7491 * 7487 194 37 54 chr20 19950371 19951000 -46717005 - L1 LINE L1 -3390 3818 3180 2104 128 3 10 chr20 19951000 19951305 -46716700 - AluSq SINE Alu -8 305 3 7487 194 37 54 chr20 19951305 19952488 -46715517 - L1 LINE L1 -4028 3180 2057 321 47 0 0 chr20 19952488 19952531 -46715474 + (TG)n Simple_repeat Simple_repeat 2 44 0 7487 194 37 54 chr20 19952531 19953204 -46714801 - L1 LINE L1 -5151 2057 1374 845 255 185 4 chr20 19953238 19953497 -46714508 - L1 LINE L1 -6424 785 480 2335 175 71 54 chr20 19953624 19953654 -46714351 + L1M4 LINE L1 4700 4728 -1418 2011 148 0 3 chr20 19953654 19953957 -46714048 - AluSx SINE Alu -10 302 1 2335 175 71 54 chr20 19953957 19954520 -46713485 + L1M4 LINE L1 4728 5303 -843 5195 182 65 125 chr20 19954523 19956533 -46711472 + L1MC/D LINE L1 3525 5464 -838 497 239 1 45 chr20 19957335 19957466 -46710539 - MER5B DNA MER1_type -50 139 4 385 240 39 0 chr20 19957994 19958098 -46709907 - MLT1L LTR MaLR -4 611 504 269 171 159 9 chr20 19958103 19958183 -46709822 + MIR SINE MIR 57 143 -67 1978 156 0 13 chr20 19958398 19958712 -46709293 + AluJb SINE Alu 1 310 -2 207 231 19 0 chr20 19958970 19959022 -46708983 + GA-rich Low_complexity Low_complexity 4 56 0 415 128 23 70 chr20 19959030 19959116 -46708889 + L1MC4 LINE L1 7961 8042 0 574 289 12 31 chr20 19960787 19960830 -46707175 - L1MC4a LINE L1 -1888 5920 5878 1940 158 10 0 chr20 19960830 19961127 -46706878 - AluSx SINE Alu -12 300 1 574 289 12 31 chr20 19961127 19961339 -46706666 - L1MC4a LINE L1 -1930 5878 5670 2261 105 0 0 chr20 19961720 19962015 -46705990 + AluSx SINE Alu 1 295 -17 209 297 30 20 chr20 19962181 19962282 -46705723 - MIR SINE MIR 0 262 161 1745 210 63 71 chr20 19962303 19962833 -46705172 - MLT1H LTR MaLR 0 590 33 2105 117 0 23 chr20 19962833 19963141 -46704864 + AluSx SINE Alu 1 301 -11 1745 210 63 71 chr20 19963141 19963162 -46704843 - MLT1H LTR MaLR -557 33 13 1097 189 0 0 chr20 19963170 19963355 -46704650 + MER58A DNA MER1_type 40 224 0 2530 62 3 0 chr20 19963949 19964257 -46703748 + AluY SINE Alu 1 309 -2 228 255 82 20 chr20 19964296 19964394 -46703611 + L1MC/D LINE L1 5832 5935 -1873 32 0 0 0 chr20 19964400 19964432 -46703573 + AT_rich Low_complexity Low_complexity 1 32 0 1294 180 77 31 chr20 19964435 19964861 -46703144 + MLT1D LTR MaLR 13 498 -7 191 27 0 108 chr20 19964861 19964881 -46703124 + (TA)n Simple_repeat Simple_repeat 1 17 -16 1333 187 154 23 chr20 19964881 19965277 -46702728 - LTR7 LTR ERV1 -2 448 1 191 27 0 108 chr20 19965277 19965293 -46702712 + (TA)n Simple_repeat Simple_repeat 17 33 0 2099 125 0 0 chr20 19965345 19965633 -46702372 - AluSg SINE Alu -9 301 14 341 223 223 0 chr20 19965812 19965933 -46702072 + MER5A DNA MER1_type 42 189 0 2254 98 10 0 chr20 19966733 19967028 -46700977 + AluSc SINE Alu 1 298 -11 2521 126 0 8 chr20 19967291 19967648 -46700357 + THE1B LTR MaLR 11 364 0 683 265 22 5 chr20 19968143 19968328 -46699677 - L1MB7 LINE L1 -10 6174 5987 210 233 0 0 chr20 19968677 19968737 -46699268 + (TG)n Simple_repeat Simple_repeat 1 60 0 1840 159 7 7 chr20 19969337 19969633 -46698372 + AluJo SINE Alu 1 296 -16 456 167 12 0 chr20 19969821 19969905 -46698100 + AluSg/x SINE Alu 207 291 -19 774 164 23 0 chr20 19969916 19970044 -46697961 + AluJ SINE Alu 2 132 -180 2040 106 29 0 chr20 19970767 19971042 -46696963 + AluSx SINE Alu 30 312 0 955 162 0 54 chr20 19971341 19971545 -46696460 + AluJ SINE Alu 120 312 0 989 200 71 11 chr20 19972036 19972320 -46695685 + L1MC4a LINE L1 6980 7270 -538 503 279 41 23 chr20 19972853 19973072 -46694933 + L1MEc LINE L1 2136 2358 -4038 374 212 0 0 chr20 19973191 19973257 -46694748 - MLT1H1 LTR MaLR -474 81 16 447 320 109 39 chr20 19973489 19973948 -46694057 - LTR16C LTR ERVL 0 491 1 325 313 67 13 chr20 19974119 19974269 -46693736 - MIR SINE MIR -70 192 35 1373 208 148 54 chr20 19974393 19974820 -46693185 - MLT1C LTR MaLR 0 467 1 189 241 130 0 chr20 19975930 19975984 -46692021 - L2 LINE L2 -2 3311 3251 1683 200 108 25 chr20 19976167 19976637 -46691368 + L1MC4a LINE L1 6790 7298 -510 4941 130 87 36 chr20 19976638 19977649 -46690356 + pTR5 LTR ERV1 743 2020 -418 329 231 29 19 chr20 19977649 19977753 -46690252 + LTR30 LTR ERV1 539 643 -79 2359 101 0 0 chr20 19977753 19978079 -46689926 + pTR5 LTR ERV1 67 392 -2046 1095 189 168 101 chr20 19978083 19978410 -46689595 + L1MD3 LINE L1 7475 7844 -151 2229 70 0 91 chr20 19978410 19978751 -46689254 - AluY SINE Alu -1 310 1 1095 189 168 101 chr20 19978751 19978888 -46689117 + L1MD3 LINE L1 7844 7970 -25 1477 139 46 17 chr20 19978920 19979157 -46688848 + AluSq SINE Alu 7 250 -63 318 60 40 0 chr20 19979265 19979315 -46688690 + AluSq SINE Alu 250 301 0 2391 67 0 51 chr20 19979382 19979696 -46688309 + AluY SINE Alu 1 298 -13 2130 100 48 0 chr20 19979707 19979997 -46688008 + AluSx SINE Alu 1 304 -8 1225 110 11 21 chr20 19980668 19980859 -46687146 - AluSg/x SINE Alu -3 307 119 2694 81 0 18 chr20 19980869 19981253 -46686752 - L1PB1 LINE L1 -1 6150 5774 2313 106 0 0 chr20 19981289 19981581 -46686424 + AluSg SINE Alu 1 292 -18 2188 140 0 0 chr20 19981597 19981897 -46686108 + AluSx SINE Alu 3 302 -10 621 282 39 11 chr20 19981984 19982165 -46685840 + MER91A DNA MER1_type 1 186 -10 4098 181 62 26 chr20 19982502 19983503 -46684502 - L1MB3 LINE L1 0 6183 5151 633 187 89 8 chr20 19983503 19983626 -46684379 + FLAM_C SINE Alu 1 133 0 22 0 0 0 chr20 19983643 19983665 -46684340 + AT_rich Low_complexity Low_complexity 1 22 0 419 138 46 18 chr20 19983694 19983803 -46684202 + CT-rich Low_complexity Low_complexity 1 112 0 591 202 0 34 chr20 19983809 19983928 -46684077 - AluSg/x SINE Alu 0 312 198 419 200 86 0 chr20 19983958 19984063 -46683942 - L1MB3 LINE L1 -1056 5090 4977 5447 127 20 16 chr20 19984063 19984883 -46683122 - Tigger1 DNA MER2_type 0 2418 1593 2046 119 26 7 chr20 19984883 19985186 -46682819 - AluSx SINE Alu -3 309 1 5447 127 20 16 chr20 19985186 19985221 -46682784 - Tigger1 DNA MER2_type -825 1593 1560 1680 152 8 13 chr20 19985218 19985573 -46682432 - Tigger1 DNA MER2_type -2009 409 1 * 2495 214 67 42 chr20 19985573 19986171 -46681834 - L1MB3 LINE L1 -1168 4978 4360 1761 122 12 104 chr20 19986171 19986507 -46681498 - AluSx SINE Alu 0 312 8 2495 214 67 42 chr20 19986507 19986576 -46681429 - L1MB3 LINE L1 -1786 4360 4294 343 251 107 15 chr20 19986697 19986875 -46681130 + MER58 DNA MER1_type 15 2418 -2 345 241 102 102 chr20 19986887 19986940 -46681065 - L1MC/D LINE L1 -2037 5771 5719 958 100 8 0 chr20 19986940 19987070 -46680935 - FLAM_C SINE Alu -2 131 1 345 241 102 102 chr20 19987070 19987261 -46680744 - L1MC/D LINE L1 -2088 5720 5527 547 248 101 38 chr20 19987736 19988078 -46679927 + LTR43 LTR ERV1 180 450 -62 228 243 208 21 chr20 19988355 19988499 -46679506 - L1P LINE L1 -1097 5049 4879 319 273 137 48 chr20 19988514 19988975 -46679030 - L1MC/D LINE L1 -1299 4847 4346 1169 161 0 0 chr20 19989007 19989199 -46678806 + L1P5 LINE L1 1 192 -6671 9950 159 32 26 chr20 19989202 19990644 -46677361 + L1P5 LINE L1 995 2426 -4441 2389 82 7 10 chr20 19990644 19990950 -46677055 - AluY SINE Alu -6 305 1 9950 159 32 26 chr20 19990950 19991786 -46676219 + L1P5 LINE L1 2426 3255 -3612 2282 111 7 0 chr20 19991786 19992084 -46675921 - AluSx SINE Alu -12 300 1 9950 159 32 26 chr20 19992084 19993708 -46674297 + L1P5 LINE L1 3255 4866 -2001 180 0 0 0 chr20 19993708 19993728 -46674277 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 9950 159 32 26 chr20 19993728 19994948 -46673057 + L1P5 LINE L1 4866 6506 -361 303 322 0 0 chr20 19994950 19995040 -46672965 + L1MC4 LINE L1 6614 6703 -1339 524 176 32 32 chr20 19995714 19995839 -46672166 + MIR SINE MIR 65 189 -73 37 0 0 0 chr20 19995842 19995879 -46672126 + AT_rich Low_complexity Low_complexity 1 37 0 1818 165 0 7 chr20 19996191 19996482 -46671523 - AluJo SINE Alu -9 303 15 5624 119 23 45 chr20 19996482 19996765 -46671240 - L1MC1 LINE L1 -38 6295 6007 13388 42 5 2 chr20 19996765 19999139 -46668866 + L1PA5 LINE L1 3771 6148 -6 5624 119 23 45 chr20 19999139 19999773 -46668232 - L1MC1 LINE L1 -326 6007 5398 756 285 5 9 chr20 19999776 19999990 -46668015 - L1ME LINE L1 -412 5758 5546 1187 132 0 0 chr20 20000312 20000486 -46667519 + L1PA14 LINE L1 5977 6150 -11 414 224 51 105 chr20 20000567 20000634 -46667371 + L1MC5 LINE L1 7580 7649 -312 837 156 0 15 chr20 20000634 20000769 -46667236 + FLAM_C SINE Alu 1 133 0 414 224 51 105 chr20 20000769 20000816 -46667189 + L1MC5 LINE L1 7649 7697 -264 2268 105 3 0 chr20 20000816 20001111 -46666894 + AluSc SINE Alu 1 296 -13 414 224 51 105 chr20 20001111 20001308 -46666697 + L1MC5 LINE L1 7697 7875 -86 180 357 0 0 chr20 20002104 20002188 -46665817 + MIR SINE MIR 161 244 -18 589 244 52 36 chr20 20003419 20003612 -46664393 - Charlie8 DNA MER1_type -2152 265 70 4640 153 26 16 chr20 20003620 20004416 -46663589 + L1MB3 LINE L1 5380 6183 0 229 303 0 15 chr20 20004563 20004629 -46663376 + MIR SINE MIR 24 88 -174 1787 167 3 27 chr20 20004999 20005299 -46662706 - AluJo SINE Alu -19 293 1 2273 166 14 70 chr20 20005585 20006067 -46661938 + MER65C LTR ERV1 1 455 -6 2265 111 14 0 chr20 20006102 20006399 -46661606 + AluSx SINE Alu 2 302 -10 2328 184 96 8 chr20 20006572 20007049 -46660956 + LTR53 LTR ERVL 1 519 0 245 327 29 62 chr20 20007204 20007256 -46660749 - L2 LINE L2 -559 2755 2703 1241 32 6 13 chr20 20007256 20007434 -46660571 - L1PA5 LINE L1 0 6154 6000 245 327 29 62 chr20 20007434 20007589 -46660416 - L2 LINE L2 -611 2703 2555 221 296 51 20 chr20 20007726 20007824 -46660181 + MER91A DNA MER1_type 2 102 -94 405 254 48 40 chr20 20008224 20008350 -46659655 - MER5A DNA MER1_type 0 189 63 225 205 0 0 chr20 20008477 20008516 -46659489 + L1MA6 LINE L1 5898 5936 -364 45 55 0 0 chr20 20008525 20008598 -46659407 + AT_rich Low_complexity Low_complexity 1 73 0 2107 139 3 0 chr20 20008598 20008907 -46659098 - 7SLRNA srpRNA srpRNA -10 310 1 1848 123 95 42 chr20 20008908 20009267 -46658738 + L1MA6 LINE L1 5923 6300 0 2346 83 0 20 chr20 20009611 20009911 -46658094 + AluSg SINE Alu 1 294 -16 1310 210 125 20 chr20 20010354 20010763 -46657242 - MER119 DNA MER1_type -1 582 131 2209 110 3 0 chr20 20010822 20011122 -46656883 - AluSg SINE Alu -9 301 1 2506 67 0 10 chr20 20011218 20011518 -46656487 - AluSp SINE Alu -16 297 1 662 65 0 0 chr20 20011686 20011779 -46656226 + AluSp/q SINE Alu 221 313 0 311 223 255 0 chr20 20011779 20011873 -46656132 + MER5A DNA MER1_type 65 182 -7 1784 48 26 0 chr20 20011873 20012101 -46655904 + L1PA14 LINE L1 5928 6161 0 2808 207 39 67 chr20 20012168 20012510 -46655495 + L1M4 LINE L1 2791 3141 -3005 1899 100 0 0 chr20 20012510 20012751 -46655254 + AluSc SINE Alu 1 241 -68 2808 207 39 67 chr20 20012751 20013341 -46654664 + L1M4 LINE L1 3141 3695 -2451 1740 160 0 66 chr20 20013341 20013659 -46654346 + AluSx SINE Alu 1 297 -15 2808 207 39 67 chr20 20013659 20013744 -46654261 + L1M4 LINE L1 3695 3781 -2365 1864 224 10 24 chr20 20013746 20014162 -46653843 + MLT1F1 LTR MaLR 1 410 -157 4687 168 50 16 chr20 20014195 20015100 -46652905 - L1MB5 LINE L1 -9 6165 5232 2232 120 0 0 chr20 20015101 20015400 -46652605 + AluSx SINE Alu 1 299 -13 1365 78 6 6 chr20 20015755 20015935 -46652070 - U2 snRNA snRNA -8 180 1 2416 113 14 0 chr20 20016139 20016494 -46651511 - Tigger4(Zombi) DNA MER2_type 0 2731 2372 1469 103 0 0 chr20 20016569 20016763 -46651242 - AluSg SINE Alu -116 194 1 21 36 0 0 chr20 20016888 20016916 -46651089 + AT_rich Low_complexity Low_complexity 1 28 0 1337 218 128 20 chr20 20017028 20017428 -46650577 + L1MA5 LINE L1 5858 6300 0 306 0 0 0 chr20 20017803 20017837 -46650168 + (GA)n Simple_repeat Simple_repeat 1 34 0 325 214 0 29 chr20 20017900 20017970 -46650035 + MER21B LTR ERV1 19 86 -777 3672 203 47 13 chr20 20017973 20018765 -46649240 + MER21B LTR ERV1 43 861 -2 228 194 90 15 chr20 20018812 20018879 -46649126 + MIR SINE MIR 117 188 -74 1960 81 46 53 chr20 20019316 20019600 -46648405 + AluSq SINE Alu 1 282 -31 222 37 0 0 chr20 20019605 20019632 -46648373 + (GGAGAA)n Simple_repeat Simple_repeat 5 31 0 224 188 31 0 chr20 20021641 20021705 -46646300 + (TA)n Simple_repeat Simple_repeat 2 67 0 2391 93 0 19 chr20 20021986 20022299 -46645706 - AluSx SINE Alu -5 307 1 198 250 31 16 chr20 20022919 20022983 -46645022 - L2 LINE L2 -222 3050 2986 701 187 13 39 chr20 20022989 20023169 -46644836 + FRAM SINE Alu 3 166 0 258 306 94 59 chr20 20023372 20023882 -46644123 - L2 LINE L2 -540 2774 2247 21 36 0 0 chr20 20024286 20024314 -46643691 + AT_rich Low_complexity Low_complexity 1 28 0 487 194 0 10 chr20 20024406 20024504 -46643501 + MER91B DNA MER1_type 82 178 -12 1855 93 30 158 chr20 20024563 20024962 -46643043 - MER7A DNA MER2_type 0 346 1 244 242 177 48 chr20 20025389 20025513 -46642492 + L2 LINE L2 3159 3298 -15 349 259 238 5 chr20 20025644 20025837 -46642168 - MIR SINE MIR -10 252 15 2164 102 0 7 chr20 20025961 20026246 -46641759 + AluSx SINE Alu 1 283 -29 198 0 0 0 chr20 20026249 20026271 -46641734 + (GAAA)n Simple_repeat Simple_repeat 2 23 0 247 262 140 9 chr20 20026494 20026601 -46641404 + L2 LINE L2 3192 3312 -1 449 261 35 2 chr20 20027051 20027217 -46640788 - MIR3 SINE MIR -3 205 32 2510 75 0 3 chr20 20027427 20027734 -46640271 - AluSc SINE Alu -3 306 1 186 304 25 25 chr20 20027906 20027985 -46640020 + MIR SINE MIR 183 261 -1 828 209 130 30 chr20 20028442 20028672 -46639333 + L1ME2 LINE L1 5912 6164 0 2519 76 0 0 chr20 20028875 20029178 -46638827 - AluSg SINE Alu -7 303 1 346 333 124 0 chr20 20029511 20029721 -46638284 + MIR SINE MIR 14 249 -13 1710 149 63 16 chr20 20030339 20030655 -46637350 + MER44D DNA MER2_type 3 603 -6 21 0 0 0 chr20 20030666 20030687 -46637318 + AT_rich Low_complexity Low_complexity 1 21 0 314 307 20 0 chr20 20030978 20031079 -46636926 + L1MC4 LINE L1 7122 7224 -818 241 241 76 13 chr20 20031076 20031155 -46636850 + L1MC4a LINE L1 7185 7268 -540 * 306 227 96 106 chr20 20031224 20031422 -46636583 + L1MC4 LINE L1 7573 7768 -274 183 114 0 0 chr20 20031532 20031567 -46636438 + (TAAAAA)n Simple_repeat Simple_repeat 6 40 0 2228 98 0 14 chr20 20031637 20031960 -46636045 + AluSq SINE Alu 1 319 0 563 345 55 12 chr20 20034171 20034501 -46633504 + L1MEc LINE L1 206 549 -6014 828 244 120 47 chr20 20034910 20035638 -46632367 + L1MEc LINE L1 806 1460 -4924 183 42 0 0 chr20 20035708 20035732 -46632273 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 403 231 22 0 chr20 20036418 20036509 -46631496 + MER5A DNA MER1_type 14 106 -83 286 180 281 0 chr20 20036708 20036797 -46631208 + MER5B DNA MER1_type 59 172 -6 349 220 60 0 chr20 20039428 20039528 -46628477 - L1MC5 LINE L1 -48 7913 7808 710 287 49 0 chr20 20039586 20039809 -46628196 + MIR SINE MIR 19 252 -10 430 241 30 23 chr20 20040436 20040569 -46627436 - L1MC5 LINE L1 -161 7800 7667 1561 87 10 0 chr20 20040902 20041097 -46626908 + AluSx SINE Alu 1 197 -115 235 139 0 0 chr20 20041101 20041144 -46626861 + AluSx SINE Alu 260 302 -6 1399 253 91 132 chr20 20041217 20041765 -46626240 + L2 LINE L2 1714 2283 -1030 999 152 6 6 chr20 20041765 20041930 -46626075 - AluSg/x SINE Alu -10 302 138 1399 253 91 132 chr20 20041930 20042879 -46625126 + L2 LINE L2 2283 3308 -5 513 254 135 83 chr20 20043169 20043614 -46624391 - MLT1H1 LTR MaLR -1 554 87 3384 210 70 24 chr20 20043617 20044690 -46623315 + L1MC4a LINE L1 6891 7808 0 480 312 40 12 chr20 20044723 20045124 -46622881 - L1ME LINE L1 -2190 4192 3781 361 270 109 35 chr20 20045156 20045270 -46622735 - L1ME LINE L1 -2745 3637 3533 1034 89 0 182 chr20 20045270 20045506 -46622499 - 7SK RNA RNA 0 193 1 361 270 109 35 chr20 20045506 20045717 -46622288 - L1ME LINE L1 -2849 3533 3286 1195 165 5 32 chr20 20045717 20045935 -46622070 - AluJb SINE Alu -16 296 85 3137 133 88 13 chr20 20046338 20046953 -46621052 - L1MB3 LINE L1 0 6183 5523 352 323 128 29 chr20 20046971 20047284 -46620721 - HAL1b LINE L1 -952 396 53 9562 206 86 15 chr20 20048390 20049012 -46618993 + L1MB3 LINE L1 46 622 -5797 233 0 62 0 chr20 20049012 20049044 -46618961 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 9562 206 86 15 chr20 20049044 20052174 -46615831 + L1MB3 LINE L1 622 3527 -2892 2231 102 0 10 chr20 20052174 20052478 -46615527 + AluSq SINE Alu 1 301 -12 9562 206 86 15 chr20 20052478 20053105 -46614900 + L1MB3 LINE L1 3527 4108 -2311 2301 98 7 3 chr20 20053105 20053402 -46614603 - AluSq SINE Alu -15 298 1 9562 206 86 15 chr20 20053402 20054851 -46613154 + L1MB3 LINE L1 4108 6298 -121 238 284 0 15 chr20 20055251 20055318 -46612687 - MIR SINE MIR -127 81 16 498 144 72 0 chr20 20056907 20057004 -46611001 + MER58 DNA MER1_type 2317 2420 0 702 282 78 37 chr20 20057071 20057532 -46610473 - L1ME LINE L1 -4402 2161 1682 599 252 70 21 chr20 20057624 20057975 -46610030 - L1ME LINE L1 -4981 1391 1046 1890 196 29 10 chr20 20058948 20059331 -46608674 - MLT1B LTR MaLR 0 390 1 241 342 102 37 chr20 20059816 20060003 -46608002 - L2 LINE L2 -2814 500 302 2500 103 73 5 chr20 20060521 20060947 -46607058 + L1MA8 LINE L1 5833 6287 -4 1599 174 7 32 chr20 20061087 20061397 -46606608 + AluJo SINE Alu 1 302 -10 1534 144 94 35 chr20 20062003 20062060 -46605945 - MER46B DNA MER2_type -2496 235 183 201 39 0 0 chr20 20062060 20062086 -46605919 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 1534 144 94 35 chr20 20062086 20062367 -46605638 - MER46B DNA MER2_type -2548 183 2 2035 138 27 0 chr20 20062765 20063062 -46604943 - AluSx SINE Alu -7 305 1 25 0 0 0 chr20 20063164 20063189 -46604816 + AT_rich Low_complexity Low_complexity 1 25 0 242 289 33 22 chr20 20064497 20064587 -46603418 + L2 LINE L2 3216 3306 -7 514 196 47 0 chr20 20067611 20067718 -46600287 + Tigger3(Golem) DNA MER2_type 1 112 -2917 * 2697 120 59 17 chr20 20067704 20068244 -46599761 + Tigger3(Golem) DNA MER2_type 2228 2790 -239 1863 110 54 48 chr20 20068249 20068603 -46599402 + Tigger3(Golem) DNA MER2_type 2673 3028 -1 274 267 95 9 chr20 20069479 20069595 -46598410 + MLT1F1-int LTR MaLR 1220 1345 -26 860 244 140 13 chr20 20069678 20070118 -46597887 + MLT1F1 LTR MaLR 66 590 0 700 238 115 41 chr20 20070402 20070818 -46597187 + L1MC4a LINE L1 5417 5863 -1945 354 179 0 0 chr20 20070916 20070983 -46597022 + L1M4 LINE L1 4697 4763 -1383 4646 114 53 24 chr20 20072579 20073336 -46594669 - MER4E LTR ERV1 0 779 1 378 91 195 13 chr20 20073474 20073551 -46594454 + MER4C LTR ERV1 1 91 -374 1567 152 120 101 chr20 20073556 20074511 -46593494 + PABL_A-int LTR ERV1 412 2323 -3623 15422 148 46 49 chr20 20074514 20074743 -46593262 + PABL_A-int LTR ERV1 1906 2134 -4464 5149 70 9 0 chr20 20074743 20075397 -46592608 + PABL_A LTR ERV1 1 660 0 15422 148 46 49 chr20 20075397 20075894 -46592111 + PABL_A-int LTR ERV1 2134 2631 -3967 2102 130 0 3 chr20 20075894 20076195 -46591810 + AluSx SINE Alu 1 300 -12 15422 148 46 49 chr20 20076195 20079052 -46588953 + PABL_A-int LTR ERV1 2631 6593 -5 648 80 0 11 chr20 20079064 20079152 -46588853 + HY4 scRNA scRNA 4 90 -3 2491 116 126 0 chr20 20079177 20079590 -46588415 + MER4C LTR ERV1 1 465 0 2307 78 19 16 chr20 20079714 20080023 -46587982 - AluSq SINE Alu -3 310 1 5035 217 45 44 chr20 20080091 20081537 -46586468 + L1M4 LINE L1 2 1444 -5202 1033 186 48 8 chr20 20081537 20081789 -46586216 + L1MA9 LINE L1 6044 6305 -7 5035 217 45 44 chr20 20081789 20081981 -46586024 + L1M4 LINE L1 1444 1634 -5012 537 79 13 0 chr20 20081981 20082057 -46585948 + MADE1 DNA Mariner 2 78 -2 5035 217 45 44 chr20 20082057 20082261 -46585744 + L1M4 LINE L1 1634 1858 -4788 681 162 140 29 chr20 20082282 20082418 -46585587 + AluJo SINE Alu 1 151 -161 1036 193 53 10 chr20 20082418 20082733 -46585272 + L1M4 LINE L1 2077 2497 -4149 1180 136 12 6 chr20 20082751 20082920 -46585085 - AluSg/x SINE Alu -17 293 124 42164 39 0 4 chr20 20082968 20089170 -46578835 + L1PA4 LINE L1 1 6155 0 2254 235 17 34 chr20 20089160 20090077 -46577928 + L1M4 LINE L1 2533 3431 -3213 * 2053 148 0 13 chr20 20090394 20090699 -46577306 - AluSx SINE Alu -11 301 1 21 0 0 0 chr20 20090714 20090735 -46577270 + AT_rich Low_complexity Low_complexity 1 21 0 2638 246 63 8 chr20 20090739 20091070 -46576935 + L1M4 LINE L1 3421 3732 -2912 2133 105 10 20 chr20 20091070 20091376 -46576629 - AluSx SINE Alu -9 303 1 2638 246 63 8 chr20 20091376 20091958 -46576047 + L1M4 LINE L1 3732 4385 -2259 1094 151 44 85 chr20 20091963 20092235 -46575770 + L1MB5 LINE L1 5914 6174 0 708 159 0 0 chr20 20092449 20092562 -46575443 + AluJo/FLAM SINE Alu 2 114 -188 1886 148 39 0 chr20 20092562 20092845 -46575160 - AluSx SINE Alu -17 295 2 2580 146 43 40 chr20 20093070 20093369 -46574636 - L1PB4 LINE L1 -1 6155 5858 2445 67 0 6 chr20 20093369 20093682 -46574323 + AluY SINE Alu 1 311 0 2580 146 43 40 chr20 20093682 20093924 -46574081 - L1PB4 LINE L1 -298 5858 5606 2166 113 0 13 chr20 20093924 20094235 -46573770 - AluSx SINE Alu -5 307 1 806 154 20 168 chr20 20094235 20094533 -46573472 - L1PB4 LINE L1 -780 5366 5113 307 308 141 13 chr20 20094538 20094772 -46573233 + L1M4 LINE L1 2860 3123 -3023 386 302 86 48 chr20 20095234 20095608 -46572397 + L1M4 LINE L1 3669 4056 -2090 2436 153 60 29 chr20 20095776 20096035 -46571970 + L1MC2 LINE L1 5847 6129 -215 1658 163 49 3 chr20 20096035 20096323 -46571682 + AluJb SINE Alu 3 303 -9 2436 153 60 29 chr20 20096323 20096545 -46571460 + L1MC2 LINE L1 6129 6343 -1 679 120 40 0 chr20 20096953 20097053 -46570952 + U13 snRNA snRNA 1 104 0 1005 177 51 37 chr20 20099441 20099656 -46568349 + MER20 DNA MER1_type 1 218 -1 2005 111 24 14 chr20 20099970 20100305 -46567700 - AluSx SINE Alu 0 312 1 2369 90 0 3 chr20 20100662 20100963 -46567042 - AluSq SINE Alu -13 300 1 2309 107 0 0 chr20 20102346 20102645 -46565360 - AluSx SINE Alu -13 299 1 202 350 12 0 chr20 20102848 20102928 -46565077 + MIR3 SINE MIR 122 202 -6 358 355 65 1 chr20 20103075 20103247 -46564758 - MIR SINE MIR -45 217 37 333 0 0 0 chr20 20103645 20103682 -46564323 + (TG)n Simple_repeat Simple_repeat 2 38 0 2492 73 3 0 chr20 20103728 20104029 -46563976 + AluSp SINE Alu 1 302 -11 2640 225 50 12 chr20 20104758 20105498 -46562507 + L1M4b LINE L1 1539 2299 -4660 1374 205 195 11 chr20 20105492 20106025 -46561980 + L1M4b LINE L1 2799 3438 -3519 * 1446 142 12 4 chr20 20106025 20106265 -46561740 + L1MB3 LINE L1 5648 5889 -294 1110 123 0 6 chr20 20106265 20106426 -46561579 + L1PA13 LINE L1 6002 6162 -1 236 170 19 0 chr20 20106540 20106593 -46561412 + (TA)n Simple_repeat Simple_repeat 2 55 0 1600 143 62 0 chr20 20106624 20106897 -46561108 + L1MB3 LINE L1 5887 6176 -7 2661 148 52 0 chr20 20107235 20107640 -46560365 + MSTB LTR MaLR 1 426 0 233 251 10 42 chr20 20108186 20108303 -46559702 + GA-rich Low_complexity Low_complexity 1 113 0 218 342 92 35 chr20 20110442 20110810 -46557195 - L2 LINE L2 -476 2838 2450 2043 165 48 14 chr20 20111393 20111744 -46556261 + MLT1A1 LTR MaLR 1 363 -2 189 0 0 0 chr20 20112559 20112580 -46555425 + (TTTTTA)n Simple_repeat Simple_repeat 6 26 0 3732 123 15 21 chr20 20113543 20114073 -46553932 - MER1A DNA MER1_type 0 527 1 2886 222 59 2 chr20 20114637 20115249 -46552756 - MLT1E1 LTR MaLR -7 647 1 21 0 0 0 chr20 20115565 20115586 -46552419 + AT_rich Low_complexity Low_complexity 1 21 0 2185 246 51 2 chr20 20115741 20116248 -46551757 + MLT1F LTR MaLR 1 532 -10 1894 160 68 60 chr20 20116780 20117240 -46550765 - MER31B LTR ERV1 -3 540 1 26 30 0 0 chr20 20117725 20117758 -46550247 + AT_rich Low_complexity Low_complexity 1 33 0 493 216 1 9 chr20 20117815 20117956 -46550049 - L1MEc LINE L1 -2964 3251 3112 911 102 8 0 chr20 20117956 20118074 -46549931 - FLAM_C SINE Alu -12 131 13 4189 205 20 16 chr20 20118076 20118341 -46549664 - L1MEc LINE L1 -3114 3101 2839 1029 65 8 0 chr20 20118341 20118465 -46549540 - L1PA7 LINE L1 -4 6150 6026 4189 205 20 16 chr20 20118465 20119180 -46548825 - L1MEc LINE L1 -3376 2839 2152 1620 188 30 6 chr20 20119182 20119517 -46548488 + L1PB4 LINE L1 4651 4993 -1153 761 134 150 16 chr20 20119517 20119644 -46548361 + AluJb SINE Alu 156 299 -13 1225 233 52 0 chr20 20119644 20119970 -46548035 + L1PB4 LINE L1 4989 5331 -815 662 96 8 64 chr20 20119974 20120099 -46547906 - L1PA4 LINE L1 -372 5783 5666 * 3077 25 3 0 chr20 20120044 20120398 -46547607 + L1PA4 LINE L1 5795 6149 -6 1301 172 13 0 chr20 20120398 20120630 -46547375 - L1MC2 LINE L1 -268 6076 5842 4977 145 29 8 chr20 20120698 20121156 -46546849 + L1PB4 LINE L1 5317 5801 -355 189 0 0 0 chr20 20121156 20121177 -46546828 + (CA)n Simple_repeat Simple_repeat 2 22 0 4977 145 29 8 chr20 20121177 20121539 -46546466 + L1PB4 LINE L1 5801 6154 -2 494 103 0 0 chr20 20121545 20121613 -46546392 + L1MA7 LINE L1 5882 5949 -342 1124 129 0 6 chr20 20121614 20121777 -46546228 + AluSp SINE Alu 137 298 -15 1114 195 4 33 chr20 20121778 20122019 -46545986 + L1MA7 LINE L1 5942 6175 -116 470 119 0 22 chr20 20122019 20122238 -46545767 + AluSx SINE Alu 1 293 -16 2976 188 58 3 chr20 20122483 20123083 -46544922 - LTR65 LTR ERV1 -36 633 1 313 304 103 46 chr20 20123124 20123204 -46544801 + L1MC4a LINE L1 4255 4329 -1817 6698 76 22 18 chr20 20123204 20123949 -46544056 + L1PA13 LINE L1 4858 5616 -547 1807 111 92 0 chr20 20123949 20124220 -46543785 + AluSx SINE Alu 1 296 -16 6698 76 22 18 chr20 20124220 20124770 -46543235 + L1PA13 LINE L1 5616 6162 -1 313 304 103 46 chr20 20124770 20125018 -46542987 + L1MC4a LINE L1 4329 4602 -1544 6567 53 11 6 chr20 20125131 20126373 -46541632 - SVA Other Other -955 1386 24 22 0 0 0 chr20 20127018 20127040 -46540965 + AT_rich Low_complexity Low_complexity 1 22 0 294 232 217 14 chr20 20127077 20127215 -46540790 + L1MC4a LINE L1 5496 5661 -460 991 109 0 0 chr20 20127479 20127607 -46540398 - FLAM_C SINE Alu -5 128 1 241 185 19 19 chr20 20128093 20128147 -46539858 + GA-rich Low_complexity Low_complexity 5 58 0 213 149 0 21 chr20 20128339 20128386 -46539619 + (CAG)n Simple_repeat Simple_repeat 1 46 0 607 203 28 57 chr20 20129099 20129276 -46538729 + MER33 DNA MER1_type 13 184 -140 5207 106 38 45 chr20 20129293 20129482 -46538523 - L1PA12 LINE L1 0 6168 5979 2501 47 7 7 chr20 20129482 20129778 -46538227 - AluY SINE Alu -15 296 1 5207 106 38 45 chr20 20129778 20129828 -46538177 - L1PA12 LINE L1 -189 5979 5930 2242 110 10 0 chr20 20129828 20130128 -46537877 - AluSq SINE Alu -10 303 1 5207 106 38 45 chr20 20130128 20130729 -46537276 - L1PA12 LINE L1 -238 5930 5333 568 184 0 0 chr20 20130736 20130839 -46537166 + MER33 DNA MER1_type 261 363 0 250 245 28 19 chr20 20131097 20131203 -46536802 + MLT2F LTR ERVL 206 312 -351 262 302 35 9 chr20 20131227 20131343 -46536662 + LTR16A LTR ERVL 13 131 -319 360 267 26 9 chr20 20131636 20131752 -46536253 + MLT2E LTR ERVL 184 301 -327 1586 124 22 102 chr20 20131807 20132129 -46535876 + AluJo SINE Alu 1 296 -16 582 244 106 6 chr20 20132863 20133043 -46534962 - MLT2F LTR ERVL -465 198 1 320 250 67 67 chr20 20133488 20133652 -46534353 + L1MC4a LINE L1 5794 5957 -1851 2383 82 3 0 chr20 20134117 20134409 -46533596 - AluSp SINE Alu -15 298 6 1960 106 0 8 chr20 20135478 20135743 -46532262 - AluSg SINE Alu -19 291 29 736 265 140 28 chr20 20136330 20136973 -46531032 + HAL1 LINE L1 757 1495 -1012 548 143 0 0 chr20 20136997 20137074 -46530931 - THE1C LTR MaLR 0 375 299 21 0 0 0 chr20 20138610 20138631 -46529374 + AT_rich Low_complexity Low_complexity 1 21 0 2010 144 17 0 chr20 20140973 20141272 -46526733 + AluSx SINE Alu 5 308 -4 2112 132 0 0 chr20 20141293 20141588 -46526417 - AluY SINE Alu -16 295 1 379 274 44 9 chr20 20142027 20142140 -46525865 + L2 LINE L2 3196 3312 -1 288 0 0 0 chr20 20142841 20142873 -46525132 + (CAAAC)n Simple_repeat Simple_repeat 2 33 0 187 298 248 22 chr20 20144469 20144788 -46523217 + L2 LINE L2 2363 2753 -561 654 204 26 33 chr20 20144817 20144969 -46523036 + MIR SINE MIR 40 190 -72 1907 133 4 4 chr20 20145137 20145455 -46522550 + AluSx SINE Alu 3 320 0 509 277 193 25 chr20 20145507 20145828 -46522177 + LTR16A1 LTR ERVL 7 381 -76 607 244 26 44 chr20 20146688 20146916 -46521089 + L1MDa LINE L1 2411 2683 -3983 943 245 57 0 chr20 20147053 20147265 -46520740 - MER58A DNA MER1_type 0 224 1 252 320 33 67 chr20 20147454 20147604 -46520401 + MIR SINE MIR 2 146 -62 1848 222 138 6 chr20 20147608 20148116 -46519889 - MLT1G LTR MaLR -2 588 14 711 241 19 51 chr20 20148357 20148573 -46519432 - LTR16A1 LTR ERVL 0 457 249 2166 105 24 0 chr20 20148906 20149200 -46518805 + AluSx SINE Alu 1 301 -11 1798 189 0 3 chr20 20149284 20149585 -46518420 - AluJb SINE Alu -12 300 1 397 147 73 0 chr20 20149626 20149694 -46518311 - L1ME2 LINE L1 -88 6076 6004 617 275 46 23 chr20 20149694 20149912 -46518093 + Charlie8 DNA MER1_type 49 271 -2146 563 270 28 22 chr20 20150005 20150183 -46517822 + MIR SINE MIR 2 180 -82 858 312 58 6 chr20 20150200 20150546 -46517459 - LTR16C LTR ERVL -2 489 126 597 196 76 32 chr20 20150792 20150950 -46517055 - L2 LINE L2 -3 3310 3146 2263 108 0 0 chr20 20150997 20151292 -46516713 - AluSq SINE Alu -18 295 1 825 250 67 118 chr20 20151452 20152037 -46515968 - MLT1H1 LTR MaLR 0 555 1 234 274 0 0 chr20 20152142 20152193 -46515812 + L1M4b LINE L1 -564 4294966782 -6798 4416 133 29 4 chr20 20152194 20152883 -46515122 + MER50 LTR ERV1 1 706 -28 5348 214 88 31 chr20 20152888 20153760 -46514245 + L1M4b LINE L1 -498 486 -5798 1268 144 44 48 chr20 20153760 20153844 -46514161 - MER30 DNA MER1_type -2 228 145 2109 119 23 0 chr20 20153844 20154146 -46513859 - AluSg SINE Alu -1 309 1 1268 144 44 48 chr20 20154146 20154290 -46513715 - MER30 DNA MER1_type -85 145 1 5348 214 88 31 chr20 20154290 20154820 -46513185 + L1M4b LINE L1 486 984 -5300 926 196 0 12 chr20 20154820 20154993 -46513012 + FRAM SINE Alu 1 170 -6 1571 170 18 29 chr20 20155000 20155276 -46512729 + AluJo SINE Alu 34 306 -6 1330 216 30 14 chr20 20155304 20155675 -46512330 + L1M4b LINE L1 1011 1387 -4997 9563 154 46 14 chr20 20155675 20158089 -46509916 + L1M1 LINE L1 16 2350 -5215 2065 126 0 3 chr20 20158089 20158403 -46509602 + AluSx SINE Alu 1 312 0 9563 154 46 14 chr20 20158403 20159130 -46508875 + L1M1 LINE L1 2350 3313 -4252 611 94 0 0 chr20 20159130 20159215 -46508790 + L1MA3 LINE L1 6216 6300 -5 23 0 0 0 chr20 20159223 20159246 -46508759 + AT_rich Low_complexity Low_complexity 1 23 0 1256 260 62 19 chr20 20159246 20159607 -46508398 + L1M4b LINE L1 1371 1715 -4848 288 0 0 0 chr20 20159607 20159639 -46508366 + (CA)n Simple_repeat Simple_repeat 2 33 0 1256 260 62 19 chr20 20159639 20159832 -46508173 + L1M4b LINE L1 1715 2111 -4452 1917 91 136 0 chr20 20159843 20160108 -46507897 + AluY SINE Alu 1 301 0 809 250 59 45 chr20 20160229 20160717 -46507288 + L1M4b LINE L1 2010 2453 -3931 1594 203 3 16 chr20 20160721 20161027 -46506978 + AluJb SINE Alu 2 303 -9 2487 234 81 7 chr20 20161039 20161777 -46506228 + L1M4b LINE L1 3200 3992 -2390 1211 170 29 125 chr20 20161777 20162153 -46505852 - MLT1A1 LTR MaLR 0 365 26 718 176 145 63 chr20 20162156 20162315 -46505690 - AluJo SINE Alu -139 173 2 306 121 45 0 chr20 20162318 20162384 -46505621 + L1MB3 LINE L1 6115 6183 0 499 222 23 171 chr20 20163295 20163511 -46504494 + MER91B DNA MER1_type 2 185 -5 2245 114 0 0 chr20 20163555 20163845 -46504160 + AluSg SINE Alu 1 290 -20 558 255 56 35 chr20 20164640 20164871 -46503134 + L1MC4a LINE L1 5593 5828 -1980 230 0 33 0 chr20 20165614 20165644 -46502361 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 255 329 36 7 chr20 20166106 20166243 -46501762 - MIR SINE MIR -19 243 103 247 281 94 62 chr20 20166427 20166555 -46501450 + L2 LINE L2 3141 3272 0 246 136 0 0 chr20 20167072 20167116 -46500889 + (A)n Simple_repeat Simple_repeat 1 44 0 2234 261 81 58 chr20 20167774 20167859 -46500146 + L1ME1 LINE L1 1 83 -5997 2277 106 0 0 chr20 20167859 20168152 -46499853 + AluSx SINE Alu 1 293 -19 2234 261 81 58 chr20 20168152 20169040 -46498965 + L1ME1 LINE L1 83 1042 -5038 2355 95 0 0 chr20 20169040 20169334 -46498671 + AluSx SINE Alu 6 299 -13 2234 261 81 58 chr20 20169334 20169948 -46498057 + L1ME1 LINE L1 1042 1640 -4440 3360 123 43 5 chr20 20171938 20172498 -46495507 - L1 LINE L1 -814 5332 4752 1678 134 19 1 chr20 20172499 20172808 -46495197 + MER46B DNA MER2_type 4 236 0 1830 116 30 51 chr20 20172808 20173066 -46494939 - L1 LINE L1 -1391 4755 4504 1188 207 161 23 chr20 20173066 20173370 -46494635 + MER7A DNA MER2_type 2 345 -1 1830 116 30 51 chr20 20173370 20173446 -46494559 - L1 LINE L1 -1642 4504 4428 * 2197 208 109 29 chr20 20173439 20174203 -46493802 + L1ME1 LINE L1 2466 3290 -2790 2324 101 0 16 chr20 20174223 20174540 -46493465 + AluSx SINE Alu 1 312 0 2083 209 75 82 chr20 20174554 20175248 -46492757 + L1ME1 LINE L1 5407 6095 -5 2363 82 0 0 chr20 20175330 20175621 -46492384 + AluSg SINE Alu 5 295 -15 2043 166 84 49 chr20 20175641 20176092 -46491913 + MLT1C LTR MaLR 1 467 0 2172 109 93 13 chr20 20176114 20176426 -46491579 + MER1B DNA MER1_type 1 337 0 832 199 0 0 chr20 20177401 20177542 -46490463 - FLAM_C SINE Alu -1 142 2 288 0 0 0 chr20 20177662 20177694 -46490311 + (TG)n Simple_repeat Simple_repeat 2 33 0 2473 67 0 3 chr20 20177924 20178224 -46489781 + AluY SINE Alu 1 299 -12 2284 101 0 0 chr20 20178246 20178542 -46489463 - AluSg SINE Alu -14 296 1 1090 257 53 48 chr20 20179219 20179482 -46488523 + MER110 LTR ERV1 63 330 -161 1166 166 10 10 chr20 20179482 20179687 -46488318 - L1MC1 LINE L1 -8 6325 6121 1090 257 53 48 chr20 20179687 20179836 -46488169 + MER110 LTR ERV1 330 477 -14 283 167 19 0 chr20 20179878 20179932 -46488073 + MER112 DNA MER1_type 21 75 -185 2162 121 3 6 chr20 20180588 20180901 -46487104 + AluJb SINE Alu 1 312 0 23 0 0 0 chr20 20181173 20181196 -46486809 + AT_rich Low_complexity Low_complexity 1 23 0 473 221 29 37 chr20 20182341 20182477 -46485528 - MLT1J LTR MaLR 0 511 377 2225 113 3 0 chr20 20183319 20183612 -46484393 + AluSx SINE Alu 4 297 -15 573 136 23 0 chr20 20183897 20183985 -46484020 + 5S rRNA rRNA 1 90 -31 747 95 9 0 chr20 20184036 20184141 -46483864 + L1MA5A LINE L1 6187 6292 -5 23 68 0 0 chr20 20184142 20184186 -46483819 + AT_rich Low_complexity Low_complexity 1 44 0 2382 102 0 0 chr20 20184318 20184623 -46483382 + AluSq SINE Alu 1 305 -8 3976 50 2 2 chr20 20185367 20185831 -46482174 + L1PA8 LINE L1 5709 6172 0 308 151 0 0 chr20 20185835 20185888 -46482117 + MER41B LTR ERV1 482 534 -101 25 0 0 0 chr20 20185889 20185914 -46482091 + AT_rich Low_complexity Low_complexity 1 25 0 1158 221 85 42 chr20 20185918 20186365 -46481640 + L1M4b LINE L1 1215 1680 -5179 1339 33 0 0 chr20 20186365 20186517 -46481488 + AluY SINE Alu 148 299 -12 2075 240 69 56 chr20 20186530 20187352 -46480653 + L1M4b LINE L1 1823 2633 -4324 2278 120 0 13 chr20 20187352 20187668 -46480337 + AluSx SINE Alu 1 312 0 2075 240 69 56 chr20 20187668 20187742 -46480263 + L1M4b LINE L1 2633 2705 -4252 804 66 9 0 chr20 20187742 20187848 -46480157 + L1MA2 LINE L1 6198 6304 0 2075 240 69 56 chr20 20187848 20187992 -46480013 + L1M4b LINE L1 2705 2846 -4111 2592 62 0 3 chr20 20187992 20188299 -46479706 + AluY SINE Alu 1 306 -5 2075 240 69 56 chr20 20188299 20188713 -46479292 + L1M4b LINE L1 2846 3262 -3695 2127 191 17 6 chr20 20188713 20189074 -46478931 - MLT1A1 LTR MaLR 0 365 1 2075 240 69 56 chr20 20189074 20189133 -46478872 + L1M4b LINE L1 3262 3319 -3638 1224 328 28 2 chr20 20189134 20189570 -46478435 - ERVL LTR ERVL -3671 2093 1647 1051 302 63 77 chr20 20189603 20189927 -46478078 - ERVL LTR ERVL -4207 1557 1230 2103 172 39 21 chr20 20189927 20190310 -46477695 + MLT1B LTR MaLR 1 390 0 1051 302 63 77 chr20 20190310 20190779 -46477226 - ERVL LTR ERVL -4534 1230 775 360 250 71 56 chr20 20190847 20191043 -46476962 - ERVL LTR ERVL -4879 618 408 812 196 17 113 chr20 20191433 20191734 -46476271 - LTR41 LTR ERVL 0 773 502 260 265 116 48 chr20 20192423 20192570 -46475435 - ERVL LTR ERVL -4623 1141 985 239 243 33 105 chr20 20193288 20193440 -46474565 - L2 LINE L2 -4 3309 3169 1087 229 46 26 chr20 20194438 20194740 -46473265 + L1ME2 LINE L1 614 921 -5800 1678 236 46 45 chr20 20194740 20194844 -46473161 + L1ME2 LINE L1 2545 2647 -3893 229 67 0 0 chr20 20194844 20194874 -46473131 + (TTTA)n Simple_repeat Simple_repeat 1 60 0 2241 73 0 24 chr20 20194874 20195162 -46472843 - AluY SINE Alu -30 281 1 1678 236 46 45 chr20 20195162 20195632 -46472373 + L1ME2 LINE L1 2646 3123 -3417 748 172 0 31 chr20 20195675 20195803 -46472202 + AluJ SINE Alu 2 125 -187 1883 146 0 27 chr20 20195819 20196120 -46471885 - AluSx SINE Alu -19 293 1 967 172 31 0 chr20 20196149 20196312 -46471693 + AluJ SINE Alu 132 299 -13 308 131 0 16 chr20 20196318 20196379 -46471626 + (GGAA)n Simple_repeat Simple_repeat 3 62 0 847 236 24 20 chr20 20196401 20196651 -46471354 + L1ME2 LINE L1 3233 3483 -3057 1728 225 34 64 chr20 20196651 20197246 -46470759 + L1ME2 LINE L1 3810 4386 -2154 1156 124 0 30 chr20 20197249 20197409 -46470596 + AluSx SINE Alu 1 157 -155 2146 70 0 22 chr20 20197409 20197681 -46470324 - AluSx SINE Alu -44 268 3 1205 199 53 136 chr20 20197702 20198534 -46469471 + L1ME2 LINE L1 5716 6492 -66 198 0 0 0 chr20 20198534 20198556 -46469449 + (CATA)n Simple_repeat Simple_repeat 3 24 0 1205 199 53 136 chr20 20198556 20198606 -46469399 + L1ME2 LINE L1 6492 6545 -13 2434 80 0 3 chr20 20198642 20198942 -46469063 + AluSc SINE Alu 1 299 -10 1114 182 54 0 chr20 20199223 20199426 -46468579 + L1PB4 LINE L1 5942 6155 -1 1677 96 9 17 chr20 20199611 20199841 -46468164 + AluSg/x SINE Alu 83 310 0 2198 92 7 0 chr20 20199852 20200184 -46467821 + AluSp SINE Alu 1 334 0 835 196 0 0 chr20 20200324 20200467 -46467538 + FLAM_C SINE Alu 1 143 0 521 290 26 31 chr20 20200485 20200678 -46467327 + Charlie8 DNA MER1_type 1 192 -2225 2277 120 0 0 chr20 20200991 20201299 -46466706 - AluSg SINE Alu -2 308 1 1635 251 207 33 chr20 20201306 20202083 -46465922 + L2 LINE L2 1882 2813 -501 668 223 63 69 chr20 20202083 20202258 -46465747 + MER5B DNA MER1_type 3 176 -2 1635 251 207 33 chr20 20202258 20202305 -46465700 + L2 LINE L2 2813 2850 -464 485 150 12 0 chr20 20202315 20202395 -46465610 - MER5A DNA MER1_type -108 81 1 531 246 56 39 chr20 20202396 20202575 -46465430 + L2 LINE L2 3098 3279 -34 2758 153 90 30 chr20 20203033 20203635 -46464370 + LTR65 LTR ERV1 31 668 -1 567 237 109 130 chr20 20205590 20206151 -46461854 - MLT1F LTR MaLR -6 549 1 3051 185 58 25 chr20 20206465 20207135 -46460870 - L1ME1 LINE L1 -5 6161 5470 1008 268 145 40 chr20 20207194 20207248 -46460757 - MLT1J LTR MaLR -8 503 456 1985 129 0 7 chr20 20207248 20207564 -46460441 + AluSx SINE Alu 1 314 0 1008 268 145 40 chr20 20207564 20207963 -46460042 - MLT1J LTR MaLR -55 456 1 192 40 0 0 chr20 20209615 20209640 -46458365 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 250 219 123 27 chr20 20209973 20210046 -46457959 + L1ME3 LINE L1 6080 6159 -3 2408 56 0 0 chr20 20210514 20210798 -46457207 + AluY SINE Alu 12 295 -16 678 254 123 4 chr20 20210871 20211099 -46456906 - MIR SINE MIR 0 262 8 1070 246 40 113 chr20 20211266 20211656 -46456349 - L1MC4a LINE L1 -1853 5955 5623 2333 107 0 0 chr20 20211656 20211955 -46456050 - AluSq SINE Alu -14 299 1 1070 246 40 113 chr20 20211955 20212166 -46455839 - L1MC4a LINE L1 -2185 5623 5398 467 204 43 143 chr20 20212175 20212405 -46455600 - L2 LINE L2 -4 3309 3103 1681 107 41 0 chr20 20212514 20212758 -46455247 + L1PA16 LINE L1 5345 5598 -568 441 103 0 0 chr20 20212770 20212828 -46455177 + Alu SINE Alu 2 59 -253 1295 131 0 15 chr20 20212828 20213016 -46454989 + AluSg/x SINE Alu 118 304 -8 3669 120 45 0 chr20 20213016 20213565 -46454440 + L1PA16 LINE L1 5593 6166 0 291 225 0 0 chr20 20213575 20213655 -46454350 - L1MC4a LINE L1 -802 5344 5265 204 125 0 0 chr20 20214022 20214054 -46453951 + (TATATG)n Simple_repeat Simple_repeat 5 36 0 2128 96 61 0 chr20 20214118 20214411 -46453594 - AluSx SINE Alu -1 311 1 631 264 86 15 chr20 20214456 20214653 -46453352 - MIR SINE MIR -26 236 26 2309 108 3 0 chr20 20214723 20215030 -46452975 - AluSx SINE Alu -4 308 1 189 0 0 0 chr20 20215416 20215437 -46452568 + (TC)n Simple_repeat Simple_repeat 2 22 0 2457 53 3 3 chr20 20218127 20218430 -46449575 - AluSc SINE Alu -6 303 1 2275 181 84 16 chr20 20219185 20219672 -46448333 + MLT2B1 LTR ERVL 1 520 0 951 211 32 16 chr20 20220388 20220578 -46447427 - MER58A DNA MER1_type 0 224 32 297 294 132 84 chr20 20220942 20221622 -46446383 + L2 LINE L2 2558 3270 -2 1890 145 3 0 chr20 20221756 20222045 -46445960 + AluSx SINE Alu 1 290 -22 1576 153 160 0 chr20 20222271 20222539 -46445466 - AluSx SINE Alu -1 311 1 40 59 0 0 chr20 20222604 20222672 -46445333 + AT_rich Low_complexity Low_complexity 1 68 0 368 281 45 54 chr20 20223091 20223315 -46444690 - L1MC4a LINE L1 -1774 6034 5813 375 231 81 43 chr20 20223788 20223927 -46444078 + MIR SINE MIR 45 188 -56 26 30 0 0 chr20 20224111 20224144 -46443861 + AT_rich Low_complexity Low_complexity 1 33 0 2283 102 0 10 chr20 20224573 20224877 -46443128 - AluSx SINE Alu -11 301 1 483 234 72 9 chr20 20225545 20225656 -46442349 - L2 LINE L2 -6 3307 3190 1753 181 58 65 chr20 20226120 20226567 -46441438 - L1MB7 LINE L1 -7 6177 5734 3775 150 64 51 chr20 20226573 20226879 -46441126 + L1MC3 LINE L1 4990 4670 -1476 2074 103 7 0 chr20 20226879 20227152 -46440853 + AluSq SINE Alu 32 306 -7 3775 150 64 51 chr20 20227152 20227897 -46440108 + L1MC3 LINE L1 4669 5403 -743 850 226 41 98 chr20 20227915 20228160 -46439845 - MER21B LTR ERV1 -269 336 98 277 264 100 45 chr20 20228133 20228243 -46439762 - MER77 LTR ERV1 -408 197 82 * 2101 142 7 0 chr20 20228266 20228569 -46439436 - AluJb SINE Alu -7 305 1 2000 191 97 39 chr20 20228603 20228916 -46439089 + L1MC3 LINE L1 6457 6750 -1035 2337 88 3 13 chr20 20228916 20229223 -46438782 + AluSq SINE Alu 1 304 -9 2000 191 97 39 chr20 20229223 20229269 -46438736 + L1MC3 LINE L1 6750 6792 -993 2154 104 0 7 chr20 20229269 20229566 -46438439 + AluSc SINE Alu 1 295 -14 2000 191 97 39 chr20 20229566 20229740 -46438265 + L1MC3 LINE L1 6792 7022 -763 1665 151 39 0 chr20 20229744 20230028 -46437977 + L1MC3 LINE L1 7472 7766 -19 648 162 0 0 chr20 20230785 20230884 -46437121 - FLAM_C SINE Alu -11 132 34 423 273 27 0 chr20 20230959 20231069 -46436936 + MIR3 SINE MIR 89 201 -7 2300 95 10 0 chr20 20231298 20231593 -46436412 - AluSq SINE Alu -14 299 2 2141 117 17 3 chr20 20232039 20232339 -46435666 - AluSx SINE Alu -8 304 1 395 315 135 0 chr20 20232463 20232641 -46435364 - MIR SINE MIR -13 249 48 328 248 148 0 chr20 20232682 20232783 -46435222 - L2 LINE L2 -1 3312 3197 1991 84 73 0 chr20 20233140 20233401 -46434604 - AluSg SINE Alu -30 280 1 26 64 0 0 chr20 20233488 20233535 -46434470 + AT_rich Low_complexity Low_complexity 1 47 0 2054 148 24 9 chr20 20234387 20234742 -46433263 + MLT1A1 LTR MaLR 1 501 -4 2304 98 7 0 chr20 20235694 20235991 -46432014 + AluSc SINE Alu 2 300 -9 987 80 0 0 chr20 20236144 20236295 -46431710 + (TA)n Simple_repeat Simple_repeat 2 152 0 745 176 37 0 chr20 20237135 20237271 -46430734 + MER3 DNA MER1_type 1 141 -68 1973 129 7 3 chr20 20237725 20238011 -46429994 + AluSx SINE Alu 1 287 -25 1830 143 10 10 chr20 20238328 20238621 -46429384 - AluJo SINE Alu -19 293 1 251 175 18 0 chr20 20238985 20239042 -46428963 + (TATATG)n Simple_repeat Simple_repeat 2 59 0 321 78 39 0 chr20 20239092 20239143 -46428862 + Charlie8 DNA MER1_type 143 195 -2222 204 256 0 0 chr20 20239513 20239552 -46428453 + MIR SINE MIR 30 68 -140 2392 103 3 0 chr20 20240732 20241034 -46426971 - AluSx SINE Alu -9 303 1 430 250 50 89 chr20 20241090 20241270 -46426735 + MER5A DNA MER1_type 12 184 -5 * 479 261 39 72 chr20 20241109 20241289 -46426716 - MER5A DNA MER1_type -15 174 1 346 292 69 15 chr20 20241336 20241466 -46426539 + L2 LINE L2 3152 3288 -25 366 44 0 0 chr20 20241474 20241519 -46426486 - MADE1 DNA Mariner 0 80 36 2424 97 0 0 chr20 20241870 20242178 -46425827 + AluSx SINE Alu 1 308 -4 1728 246 114 9 chr20 20242217 20242798 -46425207 - L1MC4 LINE L1 -199 7843 7202 1051 241 148 14 chr20 20243349 20243815 -46424190 - L2 LINE L2 -32 3281 2690 216 97 0 0 chr20 20244325 20244356 -46423649 + (T)n Simple_repeat Simple_repeat 1 31 0 2145 122 3 10 chr20 20244452 20244755 -46423250 + AluSx SINE Alu 1 301 -11 5711 13 0 21 chr20 20245049 20245637 -46422368 + SVA Other Other 776 1352 -34 378 0 0 0 chr20 20245637 20245679 -46422326 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 5711 13 0 21 chr20 20245679 20245714 -46422291 + SVA Other Other 1352 1386 0 4424 147 20 11 chr20 20247701 20248665 -46419340 + MER51B-int LTR ERV1 5759 6540 -997 2379 112 0 0 chr20 20248666 20248978 -46419027 + AluSx SINE Alu 1 312 0 3319 124 148 151 chr20 20248982 20249614 -46418391 + MER51B-int LTR ERV1 6907 7538 -278 2623 24 7 3 chr20 20249614 20249912 -46418093 - AluY SINE Alu -12 299 1 3319 124 148 151 chr20 20249912 20250189 -46417816 + MER51B-int LTR ERV1 7538 7814 -2 2093 127 115 0 chr20 20250193 20250531 -46417474 + MER51B LTR ERV1 1 377 0 612 174 136 0 chr20 20250540 20250672 -46417333 + L1MA10 LINE L1 6182 6331 -3 1696 171 22 0 chr20 20250682 20250956 -46417049 + AluJo SINE Alu 25 304 -8 2349 66 0 33 chr20 20251308 20251610 -46416395 - AluY SINE Alu -19 292 1 317 338 99 31 chr20 20252353 20252767 -46415238 - L2 LINE L2 -545 2769 2328 2236 179 141 2 chr20 20252789 20253207 -46414798 + MER70B LTR ERVL 1 476 -102 2200 106 20 0 chr20 20253309 20253612 -46414393 + AluSx SINE Alu 1 309 -3 2368 86 0 0 chr20 20253745 20254036 -46413969 + AluSc SINE Alu 1 291 -18 252 116 7 275 chr20 20254072 20254210 -46413795 + LTR37A LTR ERV1 85 185 -241 497 146 56 97 chr20 20254229 20254373 -46413632 + LTR37A LTR ERV1 289 426 0 1388 195 47 112 chr20 20255687 20255966 -46412039 + LTR26E LTR ERV1 1 297 -325 816 145 8 0 chr20 20255966 20256090 -46411915 + FLAM_C SINE Alu 5 129 -4 1388 195 47 112 chr20 20256090 20256384 -46411621 + LTR26E LTR ERV1 297 619 -3 1622 148 93 0 chr20 20256948 20257239 -46410766 + L1PA16 LINE L1 5827 6144 -22 272 273 202 0 chr20 20258268 20258367 -46409638 - MIR SINE MIR -55 153 35 2400 85 0 3 chr20 20258769 20259076 -46408929 - AluSx SINE Alu -6 306 1 2080 129 11 0 chr20 20259654 20259941 -46408064 - AluSg SINE Alu -20 290 1 1886 84 0 4 chr20 20260538 20260775 -46407230 + AluSx SINE Alu 1 236 -76 32 0 0 0 chr20 20262213 20262245 -46405760 + AT_rich Low_complexity Low_complexity 1 32 0 22 88 0 0 chr20 20262345 20262402 -46405603 + AT_rich Low_complexity Low_complexity 1 57 0 2252 95 14 14 chr20 20262825 20262959 -46405046 + AluSc SINE Alu 1 134 -175 2357 92 0 0 chr20 20262959 20263254 -46404751 + AluSc SINE Alu 1 295 -14 2252 95 14 14 chr20 20263254 20263413 -46404592 + AluSc SINE Alu 133 294 -15 561 206 15 15 chr20 20263425 20263561 -46404444 + L1MB8 LINE L1 6043 6178 0 1143 199 7 48 chr20 20263865 20264137 -46403868 + MIR SINE MIR 2 262 0 305 297 20 0 chr20 20264709 20264810 -46403195 + L1ME4a LINE L1 5825 5927 -194 439 279 0 7 chr20 20264811 20264947 -46403058 + L1ME4a LINE L1 5970 6104 -17 689 152 0 0 chr20 20265087 20265186 -46402819 + AluJ/FLAM SINE Alu 2 100 -212 1665 158 0 8 chr20 20265366 20265626 -46402379 - AluJb SINE Alu -12 300 43 907 265 86 3 chr20 20266006 20266308 -46401697 + L2 LINE L2 2375 2701 -613 340 278 1 1 chr20 20266322 20266439 -46401566 - L1M4 LINE L1 -398 5780 5664 740 247 44 54 chr20 20266449 20266595 -46401410 - L1M4 LINE L1 -1317 4829 4683 2559 70 0 6 chr20 20266595 20266908 -46401097 - AluY SINE Alu 0 311 1 740 247 44 54 chr20 20266908 20267077 -46400928 - L1M4 LINE L1 -1463 4683 4517 287 157 48 36 chr20 20267094 20267177 -46400828 - L1M4 LINE L1 -3278 2868 2785 1421 150 129 78 chr20 20267181 20267607 -46400398 - LTR7 LTR ERV1 -2 448 1 2679 127 9 12 chr20 20267607 20268039 -46399966 - HERVH LTR ERV1 0 7713 7283 7076 120 7 10 chr20 20268042 20269992 -46398013 - HERVH LTR ERV1 -1805 5286 3140 * 13747 146 25 41 chr20 20269978 20272700 -46395305 - HERVH LTR ERV1 -4721 2992 1 661 106 17 14 chr20 20272707 20272814 -46395191 - LTR7 LTR ERV1 -7 443 252 384 279 158 42 chr20 20272814 20272831 -46395174 + L2 LINE L2 2695 2709 -604 2395 77 0 32 chr20 20272831 20273142 -46394863 + AluY SINE Alu 1 301 -10 384 279 158 42 chr20 20273142 20273449 -46394556 + L2 LINE L2 2709 2979 -334 2316 111 3 0 chr20 20273449 20273755 -46394250 - AluSg SINE Alu -3 307 1 1697 160 3 40 chr20 20273758 20274058 -46393947 - AluJo SINE Alu -10 302 14 384 279 158 42 chr20 20274058 20274277 -46393728 + L2 LINE L2 2980 3297 -16 567 153 113 87 chr20 20274762 20274912 -46393093 - FRAM SINE Alu -12 154 1 271 194 58 19 chr20 20275117 20275220 -46392785 + Charlie7 DNA MER1_type 40 146 -2466 1855 125 56 14 chr20 20276853 20276989 -46391016 + AluSx SINE Alu 1 130 -182 2162 122 6 3 chr20 20276989 20277300 -46390705 + AluSx SINE Alu 1 312 0 1855 125 56 14 chr20 20277300 20277450 -46390555 + AluSx SINE Alu 130 299 -13 188 307 68 74 chr20 20277806 20277982 -46390023 + L3 LINE CR1 278 452 -1125 469 275 150 18 chr20 20278143 20278310 -46389695 + MER5A DNA MER1_type 1 189 0 659 266 23 18 chr20 20278315 20278509 -46389496 - MER5B DNA MER1_type 0 178 2 246 208 293 19 chr20 20278509 20278580 -46389425 + MER5A DNA MER1_type 87 186 -3 278 140 123 0 chr20 20278591 20278648 -46389357 - MER5A DNA MER1_type -100 89 26 1267 284 68 24 chr20 20278935 20279481 -46388524 + L3 LINE CR1 931 1500 -77 656 236 239 18 chr20 20279492 20279818 -46388187 - MLT1J LTR MaLR -7 504 107 218 93 0 23 chr20 20280266 20280309 -46387696 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1930 108 61 0 chr20 20280311 20280590 -46387415 - AluSx SINE Alu -16 296 1 21 0 0 0 chr20 20280592 20280613 -46387392 + AT_rich Low_complexity Low_complexity 1 21 0 727 172 31 8 chr20 20280870 20280998 -46387007 - FLAM_C SINE Alu -2 131 1 2158 104 17 0 chr20 20281430 20281727 -46386278 + AluSp SINE Alu 1 302 -11 1689 149 4 29 chr20 20281823 20282098 -46385907 + AluJo SINE Alu 1 268 -44 324 234 89 32 chr20 20282983 20283107 -46384898 - MIR3 SINE MIR -69 139 9 527 261 35 0 chr20 20283537 20283679 -46384326 + MIR SINE MIR 93 239 -23 457 213 115 66 chr20 20284157 20284401 -46383604 - L1MC4 LINE L1 -98 7944 7689 382 288 63 35 chr20 20284534 20284819 -46383186 - L1MC4 LINE L1 -612 7430 7138 906 190 0 0 chr20 20285285 20285448 -46382557 + FRAM SINE Alu 2 164 -2 248 206 37 84 chr20 20286098 20286205 -46381800 - L1MC4 LINE L1 -1 8041 7940 1084 149 26 10 chr20 20286211 20286405 -46381600 - Tigger1 DNA MER2_type -2 2416 2220 2343 123 42 78 chr20 20286405 20286466 -46381539 - Tigger2a DNA MER2_type -2274 434 372 2556 64 0 0 chr20 20286466 20286762 -46381243 + AluY SINE Alu 1 296 -15 2343 123 42 78 chr20 20286762 20287124 -46380881 - Tigger2a DNA MER2_type -2336 372 24 5821 30 8 0 chr20 20287124 20287824 -46380181 + L1PA3 LINE L1 5470 6174 0 2343 123 42 78 chr20 20287824 20287847 -46380158 - Tigger2a DNA MER2_type -2684 24 2 * 3127 120 16 32 chr20 20287847 20287984 -46380021 - Tigger1 DNA MER2_type -196 2222 2084 1664 173 19 26 chr20 20287984 20288291 -46379714 - AluSx SINE Alu -3 309 5 2503 62 0 13 chr20 20288301 20288608 -46379397 - AluY SINE Alu -8 303 1 3127 120 16 32 chr20 20288608 20288955 -46379050 - Tigger1 DNA MER2_type -343 2075 1735 2135 107 3 30 chr20 20288979 20289279 -46378726 + AluSg SINE Alu 1 292 -18 2503 69 0 16 chr20 20289279 20289584 -46378421 + AluY SINE Alu 1 300 -11 741 103 75 0 chr20 20289584 20289691 -46378314 - AluJo/FLAM SINE Alu -196 116 2 2278 101 3 0 chr20 20289701 20289999 -46378006 - AluSx SINE Alu -13 299 1 11035 108 38 18 chr20 20290000 20290631 -46377374 - Tigger1 DNA MER2_type -671 1747 1130 1823 185 0 0 chr20 20290631 20290918 -46377087 + AluJb SINE Alu 3 289 -23 11035 108 38 18 chr20 20290918 20291961 -46376044 - Tigger1 DNA MER2_type -1288 1130 40 1553 187 7 14 chr20 20292710 20292994 -46375011 - AluJb SINE Alu -30 282 1 1258 237 251 16 chr20 20293716 20294226 -46373779 - LTR41 LTR ERVL -143 630 1 248 263 76 42 chr20 20294234 20294352 -46373653 - MER103 DNA DNA -43 123 2 230 322 103 11 chr20 20295242 20295503 -46372502 - L2 LINE L2 -1132 2182 1898 242 264 0 0 chr20 20295760 20295813 -46372192 + MER5A DNA MER1_type 39 91 -98 234 0 0 0 chr20 20296959 20296985 -46371020 + (T)n Simple_repeat Simple_repeat 1 26 0 767 264 49 8 chr20 20297204 20297450 -46370555 + MIR SINE MIR 7 262 0 230 308 0 13 chr20 20297454 20297532 -46370473 - L3 LINE CR1 -109 1468 1392 2429 57 3 29 chr20 20297991 20298306 -46369699 - AluSp SINE Alu -6 307 1 1143 167 33 0 chr20 20298332 20298547 -46369458 - L1MB2 LINE L1 -2 6169 5948 2028 165 24 0 chr20 20299247 20299581 -46368424 + MER2 DNA MER2_type 1 342 -2 1667 126 28 0 chr20 20299805 20300052 -46367953 + AluSx SINE Alu 52 305 -7 348 169 37 7 chr20 20300056 20300192 -46367813 + (TA)n Simple_repeat Simple_repeat 1 140 0 1790 163 14 7 chr20 20300223 20300512 -46367493 - AluSx SINE Alu -21 291 1 1310 152 5 19 chr20 20300683 20300894 -46367111 + AluJo SINE Alu 87 294 -18 21 0 0 0 chr20 20301239 20301260 -46366745 + AT_rich Low_complexity Low_complexity 1 21 0 235 106 85 0 chr20 20301273 20301320 -46366685 - LTR49 LTR ERV1 -74 521 471 2124 144 0 0 chr20 20301487 20301779 -46366226 + AluSx SINE Alu 1 292 -20 378 234 0 0 chr20 20302476 20302540 -46365465 - MER2 DNA MER2_type 0 345 282 27 29 0 0 chr20 20302546 20302580 -46365425 + AT_rich Low_complexity Low_complexity 1 34 0 2286 116 0 0 chr20 20302587 20302889 -46365116 + AluSx SINE Alu 1 302 -10 1172 159 15 10 chr20 20302889 20303090 -46364915 - MER2 DNA MER2_type -143 202 1 2608 54 0 0 chr20 20304601 20304898 -46363107 + AluY SINE Alu 1 297 -14 1063 144 27 5 chr20 20305721 20305909 -46362096 - L1MD1 LINE L1 0 6242 6051 3053 111 12 2 chr20 20305910 20306324 -46361681 - MER1A DNA MER1_type -111 418 1 965 156 0 0 chr20 20306324 20306463 -46361542 - MER2 DNA MER2_type -206 139 1 770 240 50 6 chr20 20306463 20306759 -46361246 - L1MDa LINE L1 -1807 4733 3494 2196 108 3 3 chr20 20306771 20307066 -46360939 + AluSg SINE Alu 1 295 -15 7132 197 75 55 chr20 20307066 20307363 -46360642 - L1MDa LINE L1 -3900 2640 2351 897 129 0 23 chr20 20307363 20307495 -46360510 - FLAM_C SINE Alu -4 129 1 7132 197 75 55 chr20 20307495 20307796 -46360209 - L1MDa LINE L1 -4189 2351 2058 2554 71 7 0 chr20 20307796 20308106 -46359899 - AluSp SINE Alu -1 312 1 7132 197 75 55 chr20 20308106 20309985 -46358020 - L1MDa LINE L1 -4482 2058 27 450 297 88 33 chr20 20310017 20310290 -46357715 - L1ME4a LINE L1 -4 6117 5830 1771 159 10 20 chr20 20311522 20311818 -46356187 + AluJo SINE Alu 1 293 -19 1989 163 34 70 chr20 20312452 20312645 -46355360 + MSTB LTR MaLR 1 199 -227 2295 74 18 0 chr20 20312645 20312930 -46355075 + AluSx SINE Alu 1 290 -22 1989 163 34 70 chr20 20312930 20313178 -46354827 + MSTB LTR MaLR 199 426 0 474 266 37 79 chr20 20313231 20313389 -46354616 - L2 LINE L2 -1 3312 3164 2346 95 16 7 chr20 20313389 20313693 -46354312 + AluSx SINE Alu 1 307 -5 474 266 37 79 chr20 20313693 20313748 -46354257 - L2 LINE L2 -149 3164 3108 2362 105 0 7 chr20 20313903 20314209 -46353796 + AluSx SINE Alu 1 304 -8 2841 208 110 13 chr20 20315124 20315425 -46352580 - L1ME1 LINE L1 -7 6159 5888 2388 105 0 3 chr20 20315425 20315738 -46352267 - AluSx SINE Alu 0 312 1 2841 208 110 13 chr20 20315738 20316379 -46351626 - L1ME1 LINE L1 -278 5888 5122 695 158 0 0 chr20 20316398 20316512 -46351493 - FLAM_C SINE Alu -27 116 3 417 218 8 32 chr20 20316526 20316650 -46351355 - L1ME1 LINE L1 -1050 5096 4976 197 343 138 15 chr20 20316877 20317145 -46350860 - L2 LINE L2 -1527 1787 1487 947 164 47 26 chr20 20318091 20318323 -46349682 + L1MB8 LINE L1 5936 6172 -6 886 112 8 8 chr20 20318416 20318550 -46349455 + FLAM_C SINE Alu 1 134 -9 39 80 0 0 chr20 20318550 20318638 -46349367 + AT_rich Low_complexity Low_complexity 1 88 0 1067 140 17 6 chr20 20318656 20318834 -46349171 - AluSg/x SINE Alu -1 309 130 2043 120 3 13 chr20 20318835 20319135 -46348870 - AluSx SINE Alu -15 297 1 2451 79 0 0 chr20 20319625 20319929 -46348076 - AluY SINE Alu -7 304 1 189 294 44 0 chr20 20320243 20320311 -46347694 - L2 LINE L2 -2 3311 3241 2303 86 14 0 chr20 20320451 20320743 -46347262 + AluSc SINE Alu 1 296 -13 312 301 140 28 chr20 20321705 20322127 -46345878 + L2 LINE L2 2237 2705 -609 570 250 255 32 chr20 20322134 20322757 -46345248 - HAL1 LINE L1 0 2507 1746 1259 209 129 58 chr20 20322764 20322816 -46345189 - HAL1 LINE L1 -816 1691 1644 2123 117 10 0 chr20 20322816 20323106 -46344899 - AluSx SINE Alu -19 293 1 1259 209 129 58 chr20 20323106 20323574 -46344431 - HAL1 LINE L1 -863 1644 1134 1855 200 113 42 chr20 20323598 20323969 -46344036 - MER34 LTR ERV1 0 542 124 2451 97 0 0 chr20 20323969 20324277 -46343728 - AluSx SINE Alu -4 308 1 1855 200 113 42 chr20 20324277 20324411 -46343594 - MER34 LTR ERV1 -418 124 1 256 255 124 72 chr20 20324411 20324446 -46343559 - L2 LINE L2 -7 3306 3274 2314 162 74 0 chr20 20324446 20324865 -46343140 + LTR47A LTR ERVL 1 450 -2 256 255 124 72 chr20 20324865 20324982 -46343023 - L2 LINE L2 -39 3274 3146 869 158 0 0 chr20 20324994 20325127 -46342878 - FLAM_A SINE Alu 0 133 1 371 340 32 0 chr20 20325459 20325615 -46342390 - LTR67 LTR ERVL -6 551 391 685 289 43 17 chr20 20325729 20325964 -46342041 - LTR67 LTR ERVL -315 242 2 1656 196 43 23 chr20 20326320 20326440 -46341565 + MER68 LTR ERV1 207 323 -239 1958 86 116 8 chr20 20326440 20326708 -46341297 + AluSg SINE Alu 1 297 -13 1656 196 43 23 chr20 20326708 20326934 -46341071 + MER68 LTR ERV1 323 560 -2 705 169 116 110 chr20 20327035 20327354 -46340651 - LTR37B LTR ERV1 0 468 148 1348 170 5 0 chr20 20327363 20327575 -46340430 + AluJo SINE Alu 88 300 -12 2060 115 21 0 chr20 20327579 20327865 -46340140 + AluSx SINE Alu 1 292 -20 471 180 36 27 chr20 20327908 20328019 -46339986 - LTR37B LTR ERV1 -349 119 8 417 242 103 36 chr20 20328671 20328865 -46339140 - MIR SINE MIR -46 216 10 2310 87 10 10 chr20 20329267 20329578 -46338427 - AluSx SINE Alu -1 311 1 1514 205 0 7 chr20 20329847 20330145 -46337860 + AluJo SINE Alu 1 296 -16 418 215 234 19 chr20 20330338 20330496 -46337509 + MLT1J LTR MaLR 290 481 -30 2217 110 3 0 chr20 20330557 20330857 -46337148 + AluSx SINE Alu 1 301 -11 747 211 0 0 chr20 20331079 20331212 -46336793 - FLAM_C SINE Alu 0 133 1 261 75 0 0 chr20 20331329 20331369 -46336636 + (TA)n Simple_repeat Simple_repeat 2 41 0 1659 142 71 18 chr20 20331369 20331650 -46336355 - AluJo SINE Alu -16 296 1 315 252 72 27 chr20 20331650 20331761 -46336244 + L1ME LINE L1 5547 5662 -459 311 257 140 15 chr20 20331836 20331972 -46336033 + MLT1L LTR MaLR 7 159 -456 440 186 41 121 chr20 20332338 20332487 -46335518 + MLT1L LTR MaLR 289 392 -119 3730 150 11 21 chr20 20332519 20333172 -46334833 - L1MB2 LINE L1 0 6171 5526 2446 88 0 0 chr20 20333174 20333471 -46334534 + AluSg SINE Alu 1 297 -13 904 97 0 0 chr20 20333500 20333613 -46334392 - AluY SINE Alu -19 292 180 280 100 0 0 chr20 20333614 20333654 -46334351 + AluY SINE Alu 139 178 -123 324 274 85 101 chr20 20333892 20334257 -46333748 - L2 LINE L2 -42 3230 2872 502 284 112 14 chr20 20334268 20334553 -46333452 - L2 LINE L2 -604 2710 2398 2250 107 7 0 chr20 20334557 20334857 -46333148 + AluSx SINE Alu 3 304 -8 1402 280 74 62 chr20 20334895 20335627 -46332378 - MER21B LTR ERV1 -117 746 6 2245 110 3 3 chr20 20335665 20335964 -46332041 - AluSq SINE Alu -14 299 1 488 195 0 0 chr20 20335968 20336055 -46331950 + Charlie1 DNA MER1_type 104 190 -2571 * 702 165 53 43 chr20 20336053 20336241 -46331764 + Charlie1 DNA MER1_type 2572 2761 0 1807 113 0 4 chr20 20336345 20336593 -46331412 - AluSx SINE Alu -6 306 60 2113 120 3 0 chr20 20336701 20336992 -46331013 + AluSp SINE Alu 12 303 -10 1069 117 56 6 chr20 20337020 20337200 -46330805 - L1MC4 LINE L1 -498 7544 7356 187 244 81 23 chr20 20337404 20337490 -46330515 - MIR SINE MIR -47 215 125 2251 105 0 0 chr20 20339156 20339460 -46328545 + AluSx SINE Alu 1 304 -8 181 28 111 0 chr20 20339463 20339499 -46328506 + A-rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr20 20340207 20340228 -46327777 + AT_rich Low_complexity Low_complexity 1 21 0 903 169 7 19 chr20 20340270 20340424 -46327581 - FRAM SINE Alu -17 159 8 1920 145 7 7 chr20 20340563 20340860 -46327145 - AluSx SINE Alu -15 297 1 294 268 158 8 chr20 20341355 20341601 -46326404 + L1ME4a LINE L1 5600 5882 -239 260 247 82 10 chr20 20342047 20342144 -46325861 + Charlie7 DNA MER1_type 97 200 -2412 461 250 40 57 chr20 20342248 20342417 -46325588 + Charlie7 DNA MER1_type 446 616 -1996 1694 186 35 25 chr20 20342417 20342734 -46325271 + 7SLRNA srpRNA srpRNA 1 320 0 461 250 40 57 chr20 20342734 20342763 -46325242 + Charlie7 DNA MER1_type 616 644 -1968 2199 108 3 26 chr20 20342763 20343069 -46324936 - AluSq SINE Alu -14 299 1 461 250 40 57 chr20 20343069 20343117 -46324888 + Charlie7 DNA MER1_type 644 689 -1923 245 237 0 93 chr20 20343131 20343228 -46324777 + Charlie7 DNA MER1_type 2525 2612 0 194 295 0 16 chr20 20343494 20343555 -46324450 - MIR SINE MIR -122 140 81 225 336 14 64 chr20 20344273 20344413 -46323592 - MIR3 SINE MIR -63 145 13 181 300 0 17 chr20 20344473 20344533 -46323472 - MIR SINE MIR -123 139 81 2056 140 0 10 chr20 20345350 20345657 -46322348 - AluSx SINE Alu -8 304 1 405 274 17 0 chr20 20345868 20345985 -46322020 - MIR SINE MIR -81 181 63 835 142 39 63 chr20 20346618 20346823 -46321182 - Charlie5 DNA MER1_type 0 2623 2424 1484 127 35 96 chr20 20346827 20347141 -46320864 - L1MC1 LINE L1 0 6333 6039 414 0 0 0 chr20 20347242 20347288 -46320717 + (TG)n Simple_repeat Simple_repeat 2 47 0 1740 135 29 44 chr20 20347436 20347776 -46320229 - L1MB8 LINE L1 -1 6177 5843 325 265 10 0 chr20 20347976 20348074 -46319931 - L1MEc LINE L1 -4731 1665 1567 3806 67 41 0 chr20 20348093 20348585 -46319420 - L1PA7 LINE L1 -8 6146 5635 2307 82 0 39 chr20 20348591 20348896 -46319109 - AluY SINE Alu -18 293 1 4738 179 47 53 chr20 20348908 20349250 -46318755 - L1MC1 LINE L1 -292 6041 5698 2364 109 0 0 chr20 20349250 20349562 -46318443 - AluSx SINE Alu 0 312 1 4738 179 47 53 chr20 20349562 20351300 -46316705 - L1MC1 LINE L1 -635 5698 3981 2172 129 3 0 chr20 20351305 20351608 -46316397 + AluSx SINE Alu 1 304 -8 38815 28 23 1 chr20 20351611 20357027 -46310978 + L1PA2 LINE L1 616 6154 -1 2673 190 40 139 chr20 20357028 20357285 -46310720 - L1MC1 LINE L1 -2170 3976 3695 1898 119 19 0 chr20 20357285 20357546 -46310459 - AluSx SINE Alu -46 266 1 2673 190 40 139 chr20 20357546 20357789 -46310216 - L1MC1 LINE L1 -2451 3695 3430 2304 128 0 0 chr20 20357789 20358101 -46309904 - AluSx SINE Alu 0 312 1 2673 190 40 139 chr20 20358101 20358480 -46309525 - L1MC1 LINE L1 -2716 3430 3159 484 53 0 0 chr20 20358480 20358537 -46309468 - U6 snRNA snRNA -50 57 1 2673 190 40 139 chr20 20358537 20358688 -46309317 - L1MC1 LINE L1 -2987 3159 2995 505 231 86 8 chr20 20358709 20358826 -46309179 - MER33 DNA MER1_type -198 126 1 23 0 0 0 chr20 20359087 20359110 -46308895 + AT_rich Low_complexity Low_complexity 1 23 0 1833 133 7 36 chr20 20359233 20359535 -46308470 - AluJb SINE Alu -15 297 5 711 180 23 8 chr20 20360349 20360477 -46307528 - FLAM_A SINE Alu -3 130 1 1849 173 0 7 chr20 20360715 20361015 -46306990 + AluJo SINE Alu 1 298 -14 22 0 0 0 chr20 20361926 20361948 -46306057 + AT_rich Low_complexity Low_complexity 1 22 0 1193 109 0 0 chr20 20361955 20362111 -46305894 - AluSg/x SINE Alu -25 287 132 2791 26 0 0 chr20 20362113 20362421 -46305584 - AluYa5 SINE Alu -3 308 1 594 254 77 30 chr20 20362464 20362698 -46305307 - MIR SINE MIR -11 251 16 2286 119 0 0 chr20 20362734 20363046 -46304959 - AluSx SINE Alu 0 312 1 393 253 0 10 chr20 20363300 20363399 -46304606 - L2 LINE L2 -36 3236 3139 819 97 26 0 chr20 20364079 20364192 -46303813 - AluJb SINE Alu -196 116 1 389 258 11 0 chr20 20364278 20364371 -46303634 - MER81 DNA DNA -20 94 1 267 256 0 0 chr20 20364886 20364976 -46303029 + CT-rich Low_complexity Low_complexity 4 93 0 778 226 36 65 chr20 20365048 20365327 -46302678 - MLT1G LTR MaLR -301 289 19 1806 143 0 63 chr20 20366600 20366901 -46301104 + AluJo SINE Alu 8 289 -23 214 124 90 0 chr20 20367406 20367495 -46300510 + (TA)n Simple_repeat Simple_repeat 1 97 0 818 189 7 0 chr20 20367498 20367651 -46300354 - L1M4 LINE L1 -1296 4850 4697 638 285 146 77 chr20 20367767 20368403 -46299602 - L1MC4a LINE L1 -1777 6031 5352 1103 146 0 27 chr20 20368425 20368610 -46299395 - AluJ SINE Alu 0 312 133 327 217 75 47 chr20 20368630 20368736 -46299269 + L1MC4 LINE L1 6595 6703 -1339 369 0 0 0 chr20 20368760 20368801 -46299204 + (CA)n Simple_repeat Simple_repeat 2 42 0 2277 109 0 0 chr20 20368806 20369100 -46298905 - AluSq SINE Alu -19 294 1 888 152 15 0 chr20 20369100 20369232 -46298773 - AluJ SINE Alu -178 134 1 2199 108 3 10 chr20 20369505 20369812 -46298193 - AluSx SINE Alu -7 305 1 42 20 0 0 chr20 20370031 20370080 -46297925 + AT_rich Low_complexity Low_complexity 1 49 0 284 296 48 40 chr20 20370104 20370354 -46297651 - L1MC4a LINE L1 -1327 4819 4568 449 295 6 30 chr20 20370392 20370558 -46297447 + L2 LINE L2 2291 2452 -862 23 33 0 0 chr20 20370620 20370650 -46297355 + AT_rich Low_complexity Low_complexity 1 30 0 1575 184 29 29 chr20 20370672 20370982 -46297023 - AluJo SINE Alu -2 310 1 2203 208 51 5 chr20 20370988 20371638 -46296367 - L1MC4a LINE L1 0 7808 7091 2579 54 0 0 chr20 20371870 20372165 -46295840 + AluY SINE Alu 1 295 -16 1977 48 4 4 chr20 20372165 20372405 -46295600 - L1PA8 LINE L1 -9 6163 5921 2302 98 0 3 chr20 20373030 20373325 -46294680 - AluSc SINE Alu -14 295 2 507 324 19 0 chr20 20373651 20373858 -46294147 + L2 LINE L2 2487 2697 -617 297 0 0 0 chr20 20373962 20373995 -46294010 + (TG)n Simple_repeat Simple_repeat 2 34 0 2522 102 8 30 chr20 20377777 20378149 -46289856 + THE1B LTR MaLR 1 364 0 2420 84 3 3 chr20 20379076 20379384 -46288621 - AluSp SINE Alu -5 308 1 2213 114 3 10 chr20 20379384 20379690 -46288315 - AluJb SINE Alu -8 304 1 2442 97 131 11 chr20 20379735 20380117 -46287888 - MSTA LTR MaLR 0 428 1 2166 208 44 52 chr20 20380246 20380441 -46287564 - L1MD3 LINE L1 -8 7987 7792 2241 97 0 10 chr20 20380441 20380749 -46287256 - AluY SINE Alu -6 305 1 2166 208 44 52 chr20 20380749 20381116 -46286889 - L1MD3 LINE L1 -203 7792 7429 903 158 14 0 chr20 20381303 20381449 -46286556 - MER45A DNA AcHobo 0 178 31 183 296 37 0 chr20 20381774 20381855 -46286150 + L2 LINE L2 2013 2096 -1218 938 196 98 25 chr20 20382000 20382235 -46285770 + L1MA9 LINE L1 6011 6262 -50 455 239 0 7 chr20 20382857 20382999 -46285006 + (TG)n Simple_repeat Simple_repeat 2 142 0 271 281 30 103 chr20 20386948 20387151 -46280854 + MER5A DNA MER1_type 2 189 0 588 164 0 0 chr20 20388215 20388325 -46279680 + (TCCA)n Simple_repeat Simple_repeat 1 110 0 479 254 235 15 chr20 20388345 20388824 -46279181 - L2 LINE L2 -5 3308 2732 22 35 0 0 chr20 20389257 20389286 -46278719 + AT_rich Low_complexity Low_complexity 1 29 0 4369 163 46 31 chr20 20390603 20390717 -46277288 - L1MB3 LINE L1 0 6183 6072 2446 100 0 0 chr20 20390717 20391018 -46276987 - AluSx SINE Alu -11 301 1 4369 163 46 31 chr20 20391018 20391597 -46276408 - L1MB3 LINE L1 -111 6072 5465 243 61 0 0 chr20 20391597 20391630 -46276375 + (TG)n Simple_repeat Simple_repeat 2 34 0 4369 163 46 31 chr20 20391630 20392140 -46275865 - L1MB3 LINE L1 -718 5465 4964 702 251 34 10 chr20 20392186 20392393 -46275612 - L1MC4 LINE L1 -139 7903 7692 846 163 0 27 chr20 20392509 20392656 -46275349 - FLAM_C SINE Alu 0 143 1 2353 106 3 0 chr20 20392990 20393302 -46274703 - AluSp SINE Alu 0 313 1 1147 169 71 4 chr20 20393723 20393937 -46274068 - L1MC4 LINE L1 -331 7711 7480 210 71 0 0 chr20 20393937 20393965 -46274040 + (TG)n Simple_repeat Simple_repeat 2 29 0 348 304 16 21 chr20 20394058 20394252 -46273753 - L1ME2 LINE L1 -311 5853 5661 1608 186 3 18 chr20 20394951 20395236 -46272769 + AluJo SINE Alu 1 281 -31 222 91 0 0 chr20 20395239 20395272 -46272733 + (CAAT)n Simple_repeat Simple_repeat 2 34 0 232 280 112 14 chr20 20396607 20396750 -46271255 + MIR3 SINE MIR 23 179 -29 21 0 0 0 chr20 20397334 20397355 -46270650 + AT_rich Low_complexity Low_complexity 1 21 0 534 232 0 0 chr20 20398347 20398459 -46269546 + MER5B DNA MER1_type 1 112 -66 3876 223 50 38 chr20 20398594 20398845 -46269160 - MER45B DNA AcHobo -557 1024 778 2247 57 0 0 chr20 20398845 20399107 -46268898 + AluY SINE Alu 44 305 -6 3876 223 50 38 chr20 20399107 20399414 -46268591 - MER45B DNA AcHobo -803 778 476 2256 58 4 0 chr20 20399414 20399688 -46268317 - AluY SINE Alu 0 311 37 3876 223 50 38 chr20 20399688 20400018 -46267987 - MER45B DNA AcHobo -1105 476 118 1707 172 0 49 chr20 20400018 20400343 -46267662 + AluJo SINE Alu 1 309 -3 3876 223 50 38 chr20 20400343 20400463 -46267542 - MER45B DNA AcHobo -1463 118 1 200 280 0 67 chr20 20400687 20400762 -46267243 + L2 LINE L2 3154 3223 -90 203 0 0 36 chr20 20401228 20401256 -46266749 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2029 132 4 0 chr20 20401258 20401538 -46266467 - AluSx SINE Alu -31 281 1 492 204 26 26 chr20 20401740 20401853 -46266152 - MER5B DNA MER1_type -61 117 5 180 0 0 0 chr20 20403181 20403201 -46264804 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 1672 196 28 0 chr20 20403207 20403493 -46264512 + AluJb SINE Alu 1 294 -18 2086 118 78 26 chr20 20404204 20404550 -46263455 + THE1B LTR MaLR 1 364 0 285 260 0 77 chr20 20405547 20405651 -46262354 - L1MC5 LINE L1 -33 7928 7833 2367 102 3 3 chr20 20405845 20406158 -46261847 - AluSp SINE Alu 0 313 1 380 223 292 38 chr20 20406408 20406624 -46261381 - MLT1J2 LTR MaLR -15 435 124 514 221 97 23 chr20 20407011 20407240 -46260765 - L1MC4a LINE L1 0 7808 7621 659 150 25 17 chr20 20407749 20407869 -46260136 - MLT1F LTR MaLR -2 540 420 * 1238 181 98 4 chr20 20407862 20408128 -46259877 - MLT1F LTR MaLR -251 291 1 228 175 0 0 chr20 20408226 20408266 -46259739 - L2 LINE L2 -327 2986 2947 351 0 0 0 chr20 20408277 20408316 -46259689 + (TG)n Simple_repeat Simple_repeat 2 40 0 1018 49 0 0 chr20 20408414 20408536 -46259469 - AluY SINE Alu -13 298 177 2676 78 0 8 chr20 20409666 20410024 -46257981 + L1PA8 LINE L1 5818 6172 0 1742 106 121 19 chr20 20410039 20410303 -46257702 + AluSx SINE Alu 1 291 -21 2045 152 0 3 chr20 20410306 20410608 -46257397 - AluJb SINE Alu -11 301 1 22 0 0 0 chr20 20410763 20410785 -46257220 + AT_rich Low_complexity Low_complexity 1 22 0 807 186 23 12 chr20 20410880 20411052 -46256953 - L1MD2 LINE L1 -3 6356 6183 1118 235 81 47 chr20 20411054 20411459 -46256546 - L1M4 LINE L1 -1186 4960 4537 2525 70 0 0 chr20 20411459 20411758 -46256247 - AluY SINE Alu -12 299 1 1118 235 81 47 chr20 20411758 20411799 -46256206 - L1M4 LINE L1 -1609 4537 4499 319 305 54 71 chr20 20411822 20411957 -46256048 + L1M4 LINE L1 5255 5386 -2422 2088 137 0 7 chr20 20411957 20412249 -46255756 + AluJo SINE Alu 1 290 -22 319 305 54 71 chr20 20412249 20412352 -46255653 + L1M4 LINE L1 5386 5489 -2319 364 104 0 0 chr20 20412362 20412410 -46255595 - AluS SINE Alu -203 99 52 635 149 0 0 chr20 20412414 20412508 -46255497 - AluS SINE Alu -218 94 1 312 303 76 20 chr20 20412529 20412782 -46255223 + L1M4 LINE L1 5567 5842 -340 837 155 8 0 chr20 20413326 20413455 -46254550 + FLAM_C SINE Alu 2 131 -2 1743 122 67 100 chr20 20413546 20413731 -46254274 + MER7A DNA MER2_type 1 168 -2870 2063 137 52 25 chr20 20413731 20414096 -46253909 - THE1C LTR MaLR 0 375 1 1743 122 67 100 chr20 20414096 20414270 -46253735 + MER7A DNA MER2_type 168 346 0 2225 147 148 60 chr20 20415908 20416454 -46251551 - L1MD3 LINE L1 0 7995 7402 284 247 13 52 chr20 20416458 20416535 -46251470 - MLT1F1 LTR MaLR -448 119 46 338 154 77 3 chr20 20416561 20416683 -46251322 - MER53 DNA DNA -18 171 1 292 90 42 0 chr20 20416683 20416737 -46251268 - L1MD3 LINE L1 -697 7107 7034 2081 144 3 0 chr20 20420262 20420560 -46247445 + AluSx SINE Alu 1 299 -13 1951 167 0 0 chr20 20422039 20422332 -46245673 + AluJb SINE Alu 1 293 -19 264 183 0 67 chr20 20423089 20423149 -46244856 + L2 LINE L2 3217 3272 0 1492 228 44 11 chr20 20424992 20425470 -46242535 - MLT1F LTR MaLR -2 540 1 330 266 0 0 chr20 20425804 20425932 -46242073 + (TA)n Simple_repeat Simple_repeat 1 128 0 372 350 63 30 chr20 20425932 20426441 -46241564 - L1ME4a LINE L1 -153 5968 5443 904 201 0 0 chr20 20430294 20430453 -46237552 - AluJ SINE Alu -34 278 120 732 139 66 0 chr20 20430505 20430627 -46237378 - AluJ SINE Alu -170 132 3 1646 239 241 14 chr20 20431615 20432251 -46235754 + L1MCa LINE L1 1496 2275 -4151 3368 271 45 73 chr20 20432251 20433574 -46234431 - MER21-int LTR ERV1 -892 3299 2014 1110 262 50 58 chr20 20434013 20434379 -46233626 - L1MCb LINE L1 -5751 294 259 1996 156 0 0 chr20 20434379 20434674 -46233331 - AluSx SINE Alu -17 295 1 1110 262 50 58 chr20 20434674 20434929 -46233076 - L1MCb LINE L1 -5786 259 3 1221 201 88 27 chr20 20434982 20435276 -46232729 - AluJo SINE Alu 0 312 1 777 248 140 21 chr20 20436246 20436734 -46231271 - L1ME4a LINE L1 -200 5921 5347 341 43 21 0 chr20 20436734 20436781 -46231224 + (TG)n Simple_repeat Simple_repeat 1 48 0 777 248 140 21 chr20 20436781 20436870 -46231135 - L1ME4a LINE L1 -774 5347 5270 372 263 147 77 chr20 20436986 20437415 -46230590 - L2 LINE L2 0 3313 2855 1529 164 59 0 chr20 20437636 20437892 -46230113 - AluJo SINE Alu -2 310 40 488 262 144 39 chr20 20438277 20438632 -46229373 - L2 LINE L2 0 3313 2922 314 171 136 11 chr20 20439687 20439775 -46228230 - MER97a DNA MER1_type? -722 172 74 668 188 69 31 chr20 20439778 20439938 -46228067 + MER3 DNA MER1_type 1 166 -43 1917 151 6 22 chr20 20439938 20440250 -46227755 + AluJo SINE Alu 1 307 -5 3671 188 10 8 chr20 20440253 20441026 -46226979 - L1PA16 LINE L1 -831 5315 4558 5240 141 13 6 chr20 20441033 20441868 -46226137 + L1PA16 LINE L1 5323 6163 -3 401 80 0 0 chr20 20441868 20441918 -46226087 + MER3 DNA MER1_type 160 209 0 332 172 0 0 chr20 20441875 20441933 -46226072 - MER3 DNA MER1_type -119 90 33 * 2348 80 10 7 chr20 20442978 20443280 -46224725 - AluSx SINE Alu -9 303 1 2230 117 0 3 chr20 20443462 20443761 -46224244 + AluSx SINE Alu 1 298 -14 672 199 48 14 chr20 20443998 20444144 -46223861 - MER3 DNA MER1_type -56 153 3 286 191 0 36 chr20 20445496 20445580 -46222425 + C-rich Low_complexity Low_complexity 4 84 0 1689 157 7 31 chr20 20445618 20445905 -46222100 - AluJo SINE Alu -32 280 1 2384 94 3 0 chr20 20446474 20446781 -46221224 - AluSp SINE Alu -5 308 1 2216 95 3 3 chr20 20446878 20447174 -46220831 + AluY SINE Alu 1 296 -15 1071 178 30 51 chr20 20447367 20447603 -46220402 - MER46A DNA MER2_type -2 234 4 1841 79 0 0 chr20 20447610 20447839 -46220166 - AluY SINE Alu -10 301 73 382 249 213 27 chr20 20448696 20448917 -46219088 - MLT1L LTR MaLR -31 584 323 204 97 0 0 chr20 20449686 20449717 -46218288 + (TG)n Simple_repeat Simple_repeat 2 32 0 1081 197 225 45 chr20 20449736 20450200 -46217805 - L1MC4a LINE L1 -3 7807 7317 790 151 0 46 chr20 20450443 20450595 -46217410 - L1PB3 LINE L1 -2 6152 6008 220 211 0 58 chr20 20451647 20451699 -46216306 + L2 LINE L2 3262 3310 -3 835 257 97 86 chr20 20452804 20453881 -46214124 - HAL1 LINE L1 -598 1909 822 2394 67 0 0 chr20 20453929 20454227 -46213778 - AluY SINE Alu -13 298 1 1125 143 43 29 chr20 20454521 20454730 -46213275 + MER20 DNA MER1_type 4 215 -4 559 221 204 12 chr20 20454906 20455078 -46212927 - MER3 DNA MER1_type -4 205 1 228 149 0 0 chr20 20457674 20457721 -46210284 + (CA)n Simple_repeat Simple_repeat 2 48 0 483 178 50 0 chr20 20457982 20458083 -46209922 + MER33 DNA MER1_type 49 154 -170 799 33 33 44 chr20 20458112 20458293 -46209712 + (TA)n Simple_repeat Simple_repeat 2 180 0 2133 107 0 0 chr20 20458293 20458583 -46209422 - AluSx SINE Alu -22 290 1 364 237 79 18 chr20 20458584 20458698 -46209307 - MER5C DNA MER1_type -203 121 1 323 172 0 17 chr20 20460026 20460084 -46207921 + MER94 DNA DNA 78 134 0 582 263 78 0 chr20 20460856 20461035 -46206970 - L1MEc LINE L1 -5610 786 594 1289 245 98 25 chr20 20461045 20461522 -46206483 - L1MEc LINE L1 -5848 548 37 1804 102 6 87 chr20 20461691 20462014 -46205991 + AluSx SINE Alu 1 297 -15 295 265 15 0 chr20 20464101 20464169 -46203836 + MIR3 SINE MIR 92 160 -48 250 186 0 0 chr20 20465420 20465463 -46202542 - 5S rRNA rRNA -78 43 1 904 193 12 12 chr20 20466595 20466761 -46201244 - Tigger2 DNA MER2_type 0 2718 2553 * 5017 144 26 23 chr20 20466754 20467608 -46200397 - Tigger2 DNA MER2_type -1862 856 1 310 211 26 0 chr20 20468531 20468607 -46199398 + MER116 DNA Mariner 3 80 0 399 198 12 0 chr20 20468919 20469000 -46199005 - Tigger5 DNA MER2_type 0 2323 2242 * 453 184 0 0 chr20 20468990 20469066 -46198939 + Tigger5 DNA MER2_type 2242 2317 -6 309 172 203 0 chr20 20469069 20469133 -46198872 - Tigger5 DNA MER2_type -2245 78 2 339 113 0 0 chr20 20469151 20469204 -46198801 + (TG)n Simple_repeat Simple_repeat 2 54 0 1711 149 4 14 chr20 20470512 20470793 -46197212 + AluJb SINE Alu 13 290 -22 1485 281 76 36 chr20 20470859 20471638 -46196367 - L1M4 LINE L1 -1842 4304 3495 985 198 32 0 chr20 20472999 20473186 -46194819 - MER20 DNA MER1_type 0 219 27 746 283 172 16 chr20 20473718 20474096 -46193909 - MLT1L LTR MaLR -6 609 173 251 253 76 38 chr20 20474712 20474791 -46193214 - L3b LINE CR1 -94 1489 1408 2373 166 42 21 chr20 20474864 20475340 -46192665 - MER66B LTR ERV1 0 486 1 936 258 186 11 chr20 20477466 20477838 -46190167 - L1MB8 LINE L1 0 6178 5742 304 299 194 0 chr20 20478335 20478479 -46189526 - MER5A DNA MER1_type 0 189 18 1534 140 4 0 chr20 20478947 20479182 -46188823 - AluJb SINE Alu -28 284 49 664 320 55 31 chr20 20480104 20480526 -46187479 - L1ME LINE L1 -333 5788 5357 592 291 95 27 chr20 20481354 20481797 -46186208 - HAL1 LINE L1 -7 2500 2028 499 316 47 9 chr20 20483069 20483284 -46184721 - LTR16C LTR ERVL -196 295 73 1304 108 0 31 chr20 20485785 20485980 -46182025 - MER30B DNA MER1_type 0 190 2 195 152 30 0 chr20 20487927 20487960 -46180045 + MIR SINE MIR 194 227 -35 304 333 120 0 chr20 20487982 20488099 -46179906 + L2 LINE L2 3178 3308 -5 269 309 18 9 chr20 20488126 20488236 -46179769 + MIR3 SINE MIR 9 119 -89 377 280 77 16 chr20 20488438 20488620 -46179385 - MLT1L LTR MaLR -220 395 203 285 228 26 6 chr20 20489047 20489137 -46178868 + Charlie8 DNA MER1_type 242 2417 0 233 29 0 29 chr20 20490232 20490267 -46177738 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 453 146 67 0 chr20 20490595 20490684 -46177321 - L1MB2 LINE L1 0 6171 6077 236 217 33 33 chr20 20490991 20491051 -46176954 + MER5C DNA MER1_type 31 90 -234 423 77 0 0 chr20 20491152 20491204 -46176801 - AluSg/x SINE Alu -46 263 212 22 0 0 0 chr20 20491640 20491662 -46176343 + AT_rich Low_complexity Low_complexity 1 22 0 1536 158 10 53 chr20 20491662 20491965 -46176040 - AluJo SINE Alu -22 290 1 354 279 39 41 chr20 20491995 20492199 -46175806 - L1ME LINE L1 -351 5811 5605 2251 129 0 35 chr20 20492292 20492640 -46175365 + MER1B DNA MER1_type 1 336 -1 1769 143 70 0 chr20 20493344 20493631 -46174374 + AluJb SINE Alu 6 312 0 22 35 0 0 chr20 20493995 20494024 -46173981 + AT_rich Low_complexity Low_complexity 1 29 0 1450 121 49 186 chr20 20494354 20494809 -46173196 - THE1B LTR MaLR 0 364 1 577 278 214 42 chr20 20495524 20496208 -46171797 - L2 LINE L2 -339 2975 2175 1723 157 13 20 chr20 20496343 20496643 -46171362 + AluJb SINE Alu 1 298 -14 2111 94 3 29 chr20 20497658 20497987 -46170018 + AluSc SINE Alu 1 309 0 246 62 0 0 chr20 20498095 20498127 -46169878 + (CA)n Simple_repeat Simple_repeat 1 32 0 237 33 0 0 chr20 20500992 20501022 -46166983 + (TG)n Simple_repeat Simple_repeat 2 31 0 693 173 130 45 chr20 20501195 20501421 -46166584 - L1MEc LINE L1 -4176 2290 2069 1942 143 0 17 chr20 20501421 20501721 -46166284 - AluSx SINE Alu -17 295 1 693 173 130 45 chr20 20501721 20501741 -46166264 - L1MEc LINE L1 -4397 2069 2052 207 0 0 0 chr20 20501779 20501802 -46166203 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2806 163 72 49 chr20 20501908 20502619 -46165386 - L1MEc LINE L1 -4826 1600 874 262 260 48 10 chr20 20502628 20502732 -46165273 - L1M4c LINE L1 -4993 1391 1284 837 182 28 0 chr20 20503005 20503148 -46164857 - MER3 DNA MER1_type -1 208 62 2376 94 3 0 chr20 20503253 20503550 -46164455 + AluSq SINE Alu 1 298 -15 43833 42 9 1 chr20 20505198 20511298 -46156707 - L1PA4 LINE L1 0 6155 2 293 269 81 12 chr20 20511299 20511459 -46156546 - L1ME4a LINE L1 -110 6011 5841 1602 239 64 8 chr20 20512514 20513029 -46154976 - L1M4 LINE L1 -2734 3412 2869 22 0 0 0 chr20 20513787 20513809 -46154196 + AT_rich Low_complexity Low_complexity 1 22 0 331 246 318 0 chr20 20515013 20515277 -46152728 + L3 LINE CR1 1080 1427 -150 2555 46 16 0 chr20 20516389 20516695 -46151310 + AluY SINE Alu 1 311 0 225 239 57 34 chr20 20517349 20517437 -46150568 - L3 LINE CR1 -332 1245 1156 318 255 72 78 chr20 20517528 20517681 -46150324 + MIR SINE MIR 40 191 -71 229 266 217 21 chr20 20517886 20518029 -46149976 - L3 LINE CR1 -841 736 566 388 372 87 9 chr20 20518076 20518307 -46149698 - L3 LINE CR1 -1131 446 198 2349 86 23 3 chr20 20518356 20518658 -46149347 - AluSp SINE Alu -5 308 1 562 268 85 46 chr20 20518857 20518999 -46149006 - MIR SINE MIR -3 259 106 1116 234 165 18 chr20 20518999 20519400 -46148605 - LTR40b LTR ERVL 0 462 3 562 268 85 46 chr20 20519400 20519509 -46148496 - MIR SINE MIR -156 106 3 243 158 53 18 chr20 20519648 20519705 -46148300 + MER5A DNA MER1_type 82 140 -49 22211 140 24 32 chr20 20519713 20523672 -46144333 - L1MA3 LINE L1 0 7724 3736 1543 178 25 25 chr20 20523672 20523958 -46144047 + AluJb SINE Alu 1 286 -26 289 160 0 0 chr20 20523967 20524017 -46143988 + Alu SINE Alu 253 302 0 22211 140 24 32 chr20 20524017 20526291 -46141714 - L1MA3 LINE L1 -3996 3728 72 1055 60 0 0 chr20 20526301 20526435 -46141570 + LTR10C LTR ERV1 1 134 -457 1074 60 0 0 chr20 20526527 20526661 -46141344 + LTR10C LTR ERV1 1 134 -457 4828 48 10 0 chr20 20526753 20527338 -46140667 + LTR10C LTR ERV1 1 591 0 299 146 21 0 chr20 20527345 20527393 -46140612 - L1MA3 LINE L1 -7505 60 12 260 215 31 0 chr20 20527395 20527460 -46140545 + MER5A DNA MER1_type 123 189 0 423 236 11 0 chr20 20527512 20527601 -46140404 + MER5B DNA MER1_type 1 90 -88 186 289 0 0 chr20 20527597 20527642 -46140363 - MER5B DNA MER1_type -131 47 3 * 202 216 0 0 chr20 20527907 20527944 -46140061 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 185 294 159 18 chr20 20528602 20528765 -46139240 + MIR SINE MIR 21 206 -56 877 217 13 94 chr20 20529509 20529808 -46138197 - L1MC4 LINE L1 0 8042 7768 2001 101 26 13 chr20 20529830 20530406 -46137599 + MER61-int LTR ERV1 1923 2635 -2582 1733 97 120 0 chr20 20530406 20530665 -46137340 + MER51B LTR ERV1 88 377 0 1149 224 104 84 chr20 20530837 20531288 -46136717 - MLT1H LTR MaLR -39 510 51 227 330 0 21 chr20 20531405 20531502 -46136503 - LTR67 LTR ERVL -2 555 461 281 118 196 0 chr20 20533617 20533668 -46134337 + LTR67 LTR ERVL 497 557 0 241 116 70 0 chr20 20533697 20533740 -46134265 + MER63 DNA MER1_type 14 685 -377 340 239 22 22 chr20 20533740 20533832 -46134173 - L1MC/D LINE L1 -605 5559 5468 375 213 0 64 chr20 20535260 20535327 -46132678 - MLT1H LTR MaLR 0 549 479 3198 153 49 21 chr20 20535327 20535937 -46132068 - L1MC1 LINE L1 0 6333 5707 2232 121 36 36 chr20 20535937 20536301 -46131704 - THE1B LTR MaLR 0 364 1 11317 87 34 14 chr20 20536301 20537851 -46130154 - THE1B-int LTR MaLR 0 1580 1 2050 134 6 34 chr20 20537851 20538179 -46129826 - THE1B LTR MaLR 0 364 46 232 167 0 37 chr20 20538185 20538239 -46129766 + L1PB4 LINE L1 6093 6144 -12 296 109 0 0 chr20 20538241 20538287 -46129718 - THE1B LTR MaLR -382 46 1 1670 161 14 21 chr20 20538287 20538578 -46129427 - L1MC1 LINE L1 -622 5711 5423 575 260 89 65 chr20 20538670 20538916 -46129089 - MLT1H LTR MaLR -222 327 76 757 194 0 0 chr20 20539030 20539164 -46128841 + L1PB4 LINE L1 6021 6154 -2 435 285 29 0 chr20 20539910 20540047 -46127958 - L1ME3A LINE L1 -3 6167 6027 888 200 43 143 chr20 20540050 20540510 -46127495 - L1ME3A LINE L1 -263 5907 5494 396 0 0 0 chr20 20540553 20540597 -46127408 + (GA)n Simple_repeat Simple_repeat 1 44 0 22 35 0 0 chr20 20540634 20540663 -46127342 + AT_rich Low_complexity Low_complexity 1 29 0 254 203 0 181 chr20 20542010 20542148 -46125857 + MLT1H LTR MaLR 421 533 -16 2396 70 0 35 chr20 20542403 20542717 -46125288 - AluY SINE Alu -8 303 1 869 192 32 41 chr20 20543024 20543254 -46124751 - L1ME2 LINE L1 -126 6038 5800 618 242 37 91 chr20 20543881 20544379 -46123626 + MLT2F LTR ERVL 5 663 0 706 288 79 62 chr20 20544901 20545514 -46122491 - MER49 LTR ERV1 -81 842 21 258 170 64 0 chr20 20545520 20545567 -46122438 - MER81 DNA DNA -29 85 36 298 195 49 80 chr20 20545588 20545711 -46122294 + MLT1L LTR MaLR 460 610 -5 262 222 183 94 chr20 20545723 20545903 -46122102 + MARNA DNA Mariner 380 575 -11 780 191 7 0 chr20 20546523 20546659 -46121346 + MLT1H LTR MaLR 400 536 -13 858 246 22 0 chr20 20547094 20547273 -46120732 - MER3 DNA MER1_type -26 183 1 375 282 129 12 chr20 20548675 20548838 -46119167 - MIR SINE MIR -4 258 77 2500 196 86 8 chr20 20549437 20549963 -46118042 - MLT1F1 LTR MaLR 0 567 1 2184 151 37 10 chr20 20550078 20550459 -46117546 - L1MB3 LINE L1 -1 6182 5773 980 34 17 0 chr20 20550459 20550575 -46117430 + L1PA7 LINE L1 6031 6150 -4 2184 151 37 10 chr20 20550575 20550867 -46117138 - L1MB3 LINE L1 -410 5773 5491 2338 102 0 3 chr20 20550873 20551177 -46116828 - AluY SINE Alu -4 307 5 1675 173 7 17 chr20 20551180 20551481 -46116524 - AluJb SINE Alu -14 298 1 301 241 0 0 chr20 20551504 20551562 -46116443 + L2 LINE L2 3215 3272 0 255 225 38 38 chr20 20551794 20551874 -46116131 - Charlie8 DNA MER1_type -2258 159 80 281 223 50 129 chr20 20552148 20552287 -46115718 + MLT1H LTR MaLR 419 546 -3 2668 229 29 62 chr20 20552476 20552926 -46115079 - L1ME1 LINE L1 -5 6161 5754 2071 109 0 22 chr20 20552926 20553238 -46114767 + AluSx SINE Alu 1 305 -7 2668 229 29 62 chr20 20553238 20553635 -46114370 - L1ME1 LINE L1 -412 5754 5346 461 252 191 0 chr20 20553818 20553965 -46114040 + MIR SINE MIR 78 252 -10 3574 160 30 8 chr20 20554043 20554700 -46113305 + L1MC2 LINE L1 5663 6334 -10 288 0 0 0 chr20 20554792 20554824 -46113181 + (TG)n Simple_repeat Simple_repeat 2 33 0 221 125 56 42 chr20 20554906 20554978 -46113027 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 384 268 204 0 chr20 20555001 20555143 -46112862 - MER5A DNA MER1_type -10 179 9 322 288 131 65 chr20 20555372 20555678 -46112327 - MLT1I LTR MaLR -4 405 80 2345 136 53 62 chr20 20555964 20556398 -46111607 + MSTB1 LTR MaLR 1 430 -2 918 188 59 20 chr20 20556449 20556651 -46111354 - MLT1A1 LTR MaLR 0 365 156 250 83 0 42 chr20 20556673 20556721 -46111284 + (TTC)n Simple_repeat Simple_repeat 3 48 0 823 169 0 0 chr20 20556731 20556855 -46111150 - AluJb SINE Alu -187 125 2 578 197 129 27 chr20 20556859 20557006 -46110999 - MLT1A1 LTR MaLR -212 162 1 334 139 88 31 chr20 20557008 20557087 -46110918 + L1ME LINE L1 5510 5580 -586 889 188 81 67 chr20 20557176 20557494 -46110511 - L1ME2 LINE L1 -1 6163 5827 826 246 183 43 chr20 20557570 20557823 -46110182 + LTR16C LTR ERVL 36 252 -239 2075 69 0 18 chr20 20557823 20558098 -46109907 - AluY SINE Alu -5 306 37 826 246 183 43 chr20 20558098 20558242 -46109763 + LTR16C LTR ERVL 252 489 -2 386 183 20 24 chr20 20558965 20559062 -46108943 + L1ME2 LINE L1 6069 6170 0 467 288 131 14 chr20 20559869 20560091 -46107914 + MLT1L LTR MaLR 200 447 -168 770 199 6 50 chr20 20560152 20560186 -46107819 - MER5A DNA MER1_type -35 154 120 1935 212 78 23 chr20 20560186 20560672 -46107333 + MLT2B2 LTR ERVL 3 515 0 770 199 6 50 chr20 20560672 20560798 -46107207 - MER5A DNA MER1_type -69 120 1 30 0 0 0 chr20 20560876 20560906 -46107099 + AT_rich Low_complexity Low_complexity 1 30 0 472 267 67 6 chr20 20561093 20561258 -46106747 + MER97c DNA MER1_type? 1 175 -915 2663 236 55 24 chr20 20561715 20562587 -46105418 + L1MC4a LINE L1 6850 7772 -13 977 189 18 54 chr20 20562603 20562735 -46105270 + MIR SINE MIR 28 150 -112 1757 127 4 0 chr20 20562735 20563002 -46105003 + AluJb SINE Alu 40 307 -5 977 189 18 54 chr20 20563002 20563091 -46104914 + MIR SINE MIR 150 241 -21 787 189 116 0 chr20 20564807 20564971 -46103034 - MER5A DNA MER1_type 0 189 7 1521 224 25 78 chr20 20565437 20565951 -46102054 + L1ME1 LINE L1 5596 6082 -84 310 261 130 29 chr20 20565887 20566025 -46101980 + L1MA10 LINE L1 6176 6327 -7 * 2221 97 3 0 chr20 20566555 20566863 -46101142 - AluSq SINE Alu -4 309 1 298 333 34 8 chr20 20567359 20567476 -46100529 + MIR SINE MIR 20 139 -123 381 306 82 11 chr20 20567708 20567891 -46100114 + Charlie8 DNA MER1_type 36 231 -2186 2086 189 128 22 chr20 20568045 20568552 -46099453 - MLT1E2 LTR MaLR -2 624 64 850 184 37 53 chr20 20568552 20568696 -46099309 + MLT1A2 LTR MaLR 1 143 -231 2632 135 31 2 chr20 20568696 20569112 -46098893 - MSTA LTR MaLR 0 428 1 850 184 37 53 chr20 20569112 20569157 -46098848 + MLT1A2 LTR MaLR 143 187 -187 750 109 14 14 chr20 20569157 20569295 -46098710 + (TTTC)n Simple_repeat Simple_repeat 1 138 0 725 224 120 6 chr20 20569310 20569493 -46098512 + MLT1A2 LTR MaLR 162 365 0 205 67 0 0 chr20 20570543 20570573 -46097432 - L2 LINE L2 -253 3060 3031 1018 242 40 40 chr20 20570599 20570864 -46097141 - LTR16C LTR ERVL -25 466 199 2944 90 57 9 chr20 20570864 20571246 -46096759 + MLT2A1 LTR ERVL 1 406 -38 360 0 0 0 chr20 20571246 20571286 -46096719 + (TA)n Simple_repeat Simple_repeat 2 41 0 2944 90 57 9 chr20 20571286 20571327 -46096678 + MLT2A1 LTR ERVL 406 444 0 1018 242 40 40 chr20 20571327 20571363 -46096642 - LTR16C LTR ERVL -291 200 165 229 281 18 0 chr20 20571504 20571561 -46096444 + MIR SINE MIR 10 67 -195 1929 130 27 0 chr20 20571589 20571890 -46096115 - AluSx SINE Alu -3 309 1 1513 241 117 28 chr20 20571901 20572373 -46095632 - L1ME3A LINE L1 0 6170 5657 201 289 0 0 chr20 20572423 20572475 -46095530 + L2 LINE L2 3217 3268 -4 656 94 85 0 chr20 20573390 20573496 -46094509 - L1PA16 LINE L1 -10 6156 6042 525 298 150 48 chr20 20573842 20573946 -46094059 - L2 LINE L2 0 3272 3180 2277 141 13 16 chr20 20573946 20574322 -46093683 + THE1C LTR MaLR 1 375 0 525 298 150 48 chr20 20574322 20574610 -46093395 - L2 LINE L2 -92 3180 2840 22 0 0 0 chr20 20575693 20575715 -46092290 + AT_rich Low_complexity Low_complexity 1 22 0 197 341 57 11 chr20 20576061 20576149 -46091856 - MIR SINE MIR -138 124 33 228 380 0 10 chr20 20576224 20576324 -46091681 - MIR3 SINE MIR -23 185 87 304 341 37 18 chr20 20576374 20576538 -46091467 + MIR3 SINE MIR 42 208 0 2796 136 12 9 chr20 20577370 20577797 -46090208 + MSTC LTR MaLR 1 428 0 622 266 11 5 chr20 20578019 20578197 -46089808 + MLT1G1 LTR MaLR 1 225 -324 460 146 138 27 chr20 20578290 20578452 -46089553 + MLT1G LTR MaLR 361 588 -2 411 309 138 16 chr20 20578483 20578671 -46089334 + MIR SINE MIR 45 255 -7 255 31 0 0 chr20 20578815 20578847 -46089158 + (TG)n Simple_repeat Simple_repeat 1 32 0 2030 89 11 0 chr20 20578899 20579169 -46088836 - AluSx SINE Alu -39 273 1 1118 243 55 44 chr20 20579465 20579901 -46088104 - L1ME3A LINE L1 -5 6165 5725 2470 49 0 0 chr20 20580214 20580521 -46087484 + AluY SINE Alu 1 307 -4 1249 221 84 43 chr20 20580835 20581176 -46086829 - HsTC2 DNA Tc2 -36 1862 1454 1740 176 11 22 chr20 20581176 20581534 -46086471 - L1MA7 LINE L1 0 6291 5938 1249 221 84 43 chr20 20581534 20581734 -46086271 - HsTC2 DNA Tc2 -444 1454 1264 318 311 7 47 chr20 20581732 20581880 -46086125 - HsTC2 DNA Tc2 -1751 147 6 * 298 232 7 126 chr20 20583193 20583344 -46084661 + MLT1F LTR MaLR 410 542 0 1432 146 35 178 chr20 20583653 20584132 -46083873 - MLT2D LTR ERVL -3 411 1 947 208 85 5 chr20 20584337 20584549 -46083456 - L1ME3A LINE L1 -5 6165 5937 1073 257 184 2 chr20 20584557 20585042 -46082963 + MLT1G1 LTR MaLR 1 592 -3 1104 279 65 0 chr20 20585046 20585387 -46082618 - L1ME3A LINE L1 -239 5931 5569 393 289 129 10 chr20 20585892 20586093 -46081912 - HsTC2 DNA Tc2 -1660 238 14 206 189 38 0 chr20 20586461 20586514 -46081491 + GA-rich Low_complexity Low_complexity 2 56 0 235 290 65 19 chr20 20586711 20586818 -46081187 + MIR SINE MIR 140 251 -11 869 210 58 15 chr20 20587086 20587291 -46080714 + MIR SINE MIR 43 256 -6 4942 166 21 13 chr20 20587462 20588318 -46079687 + MER49 LTR ERV1 6 868 -55 750 192 0 0 chr20 20588318 20588482 -46079523 + FRAM SINE Alu 1 74 0 1590 173 7 7 chr20 20588572 20588872 -46079133 - AluJb SINE Alu -5 307 8 1777 262 49 2 chr20 20589172 20589619 -46078386 + MLT1H LTR MaLR 12 479 -70 2269 99 0 0 chr20 20590546 20590849 -46077156 - AluSg SINE Alu -7 303 1 374 229 110 17 chr20 20591214 20591332 -46076673 - L1ME LINE L1 -500 5621 5493 538 244 23 8 chr20 20592158 20592289 -46075716 + MER94 DNA DNA 2 134 0 995 134 43 37 chr20 20593127 20593192 -46074813 - MLT1D LTR MaLR -317 188 125 2472 142 65 2 chr20 20593192 20593593 -46074412 - MSTB LTR MaLR 0 426 1 995 134 43 37 chr20 20593593 20593714 -46074291 - MLT1D LTR MaLR -380 125 1 1115 278 32 54 chr20 20594885 20595085 -46072920 - LTR16C LTR ERVL -9 482 279 661 224 106 12 chr20 20595085 20595255 -46072750 + MER5A DNA MER1_type 4 189 0 1115 278 32 54 chr20 20595255 20595496 -46072509 - LTR16C LTR ERVL -212 279 51 2612 158 19 0 chr20 20595722 20596140 -46071865 + MSTB LTR MaLR 1 426 0 1554 47 0 0 chr20 20596338 20596528 -46071477 - L1PA5 LINE L1 0 6154 5965 2559 155 29 0 chr20 20596801 20597221 -46070784 - MSTB1 LTR MaLR 0 432 1 305 316 138 44 chr20 20597555 20597798 -46070207 - LTR16A LTR ERVL -93 357 75 740 206 40 23 chr20 20597798 20597973 -46070032 - MER45A DNA AcHobo 0 178 1 305 316 138 44 chr20 20597973 20598049 -46069956 - LTR16A LTR ERVL -375 75 8 747 314 12 21 chr20 20598159 20598401 -46069604 + LTR16C LTR ERVL 252 491 0 1630 256 73 7 chr20 20599023 20599433 -46068572 + LTR16A LTR ERVL 12 448 -2 397 186 72 21 chr20 20599606 20599703 -46068302 - MER46C DNA MER2_type -235 103 2 1957 228 64 38 chr20 20599826 20600432 -46067573 - L1ME2 LINE L1 0 6164 5543 351 311 36 25 chr20 20600811 20600957 -46067048 - MIR3 SINE MIR -48 160 41 1870 167 3 0 chr20 20600957 20601262 -46066743 - AluJo SINE Alu 0 312 7 351 311 36 25 chr20 20601262 20601290 -46066715 - MIR3 SINE MIR -167 41 15 435 297 43 7 chr20 20601961 20602099 -46065906 + MIR3 SINE MIR 44 186 -22 1004 223 143 54 chr20 20602205 20602596 -46065409 + MLT1H LTR MaLR 25 450 -99 4897 157 30 41 chr20 20602780 20603914 -46064091 - L1M4c LINE L1 -4549 1835 714 988 151 11 16 chr20 20603922 20604108 -46063897 - L1M4c LINE L1 -6169 215 31 1194 206 4 14 chr20 20604120 20604396 -46063609 - L1MC/D LINE L1 -750 5609 5337 522 318 46 14 chr20 20604946 20605163 -46062842 + LTR16C LTR ERVL 89 312 -179 2425 184 75 28 chr20 20605215 20605851 -46062154 - L1MC4 LINE L1 -1 8041 7376 371 303 79 0 chr20 20606359 20606511 -46061494 + MIR SINE MIR 97 260 -2 422 306 26 37 chr20 20606522 20606738 -46061267 + MIR SINE MIR 8 221 -41 257 73 0 24 chr20 20607193 20607234 -46060771 - MER5B DNA MER1_type 0 178 139 189 0 0 0 chr20 20607279 20607300 -46060705 + (CA)n Simple_repeat Simple_repeat 2 22 0 1918 220 12 12 chr20 20607321 20607730 -46060275 - MLT2C2 LTR ERVL -55 409 1 708 271 31 0 chr20 20607772 20608063 -46059942 - L1MCa LINE L1 -3293 3133 2834 2329 159 23 26 chr20 20608065 20608492 -46059513 + MSTB LTR MaLR 1 426 0 7266 176 17 90 chr20 20608492 20608951 -46059054 + MSTB-int LTR MaLR 1 492 -1159 444 189 0 0 chr20 20608951 20609025 -46058980 + AluJ/FRAM SINE Alu 222 295 -17 7266 176 17 90 chr20 20609025 20610268 -46057737 + MSTB-int LTR MaLR 492 1646 -5 2319 163 39 5 chr20 20610283 20610693 -46057312 + MSTB LTR MaLR 3 426 0 910 253 7 4 chr20 20610694 20610971 -46057034 - L1MCa LINE L1 -3591 2835 2558 24 53 0 0 chr20 20610975 20611013 -46056992 + AT_rich Low_complexity Low_complexity 1 38 0 654 125 50 0 chr20 20611013 20611133 -46056872 - L1PB1 LINE L1 -8 6859 6734 39957 58 2 2 chr20 20611144 20617277 -46050728 - L1PA5 LINE L1 -8 6146 11 381 156 0 0 chr20 20617282 20617359 -46050646 - L1PB1 LINE L1 -116 6751 6675 * 29205 114 12 55 chr20 20617354 20623793 -46044212 - L1PA7 LINE L1 0 6154 2 13171 185 39 13 chr20 20623791 20629011 -46038994 - L1PB1 LINE L1 -177 6690 1332 * 3579 221 94 6 chr20 20629026 20630087 -46037918 - L1PB1 LINE L1 -5703 1160 6 10992 159 81 6 chr20 20630102 20631000 -46037005 - L1MCa LINE L1 -3947 2479 1649 2608 151 22 0 chr20 20631000 20631417 -46036588 + MSTB LTR MaLR 1 426 0 10992 159 81 6 chr20 20631417 20632823 -46035182 - L1MCa LINE L1 -4777 1649 86 4701 156 37 46 chr20 20632829 20633531 -46034474 - L1MA9 LINE L1 -6 6306 5599 2398 84 0 3 chr20 20633531 20633830 -46034175 - AluY SINE Alu -13 298 1 4701 156 37 46 chr20 20633830 20634775 -46033230 - L1MA9 LINE L1 -713 5599 4671 2019 207 48 9 chr20 20634769 20635306 -46032699 + L1 LINE L1 2577 3134 -3012 * 537 101 13 0 chr20 20635309 20635388 -46032617 - L1MCa LINE L1 -6328 98 19 1922 130 4 4 chr20 20635396 20635673 -46032332 - AluJo SINE Alu -12 300 24 211 380 0 0 chr20 20636005 20636084 -46031921 - MIR SINE MIR -71 191 113 339 336 43 9 chr20 20636616 20636732 -46031273 + MIR3 SINE MIR 40 159 -49 472 292 38 32 chr20 20636738 20636923 -46031082 - MER117 DNA MER1_type -7 190 5 247 220 0 17 chr20 20636923 20636982 -46031023 + MIR3 SINE MIR 150 207 -1 201 238 0 0 chr20 20637118 20637160 -46030845 + MER5B DNA MER1_type 8 49 -129 1868 221 79 21 chr20 20637165 20637686 -46030319 - L1ME3 LINE L1 -6 6156 5606 2571 200 54 36 chr20 20637687 20638185 -46029820 - MER82 DNA MER2_type -1 652 139 1562 182 14 24 chr20 20638185 20638481 -46029524 - AluJb SINE Alu -19 293 1 2571 200 54 36 chr20 20638481 20638613 -46029392 - MER82 DNA MER2_type -514 139 11 403 319 28 0 chr20 20638662 20638803 -46029202 + MER5B DNA MER1_type 32 176 -2 873 152 0 104 chr20 20639578 20639671 -46028334 + MER5A DNA MER1_type 1 61 -128 689 145 47 72 chr20 20639671 20639864 -46028141 - MER53 DNA DNA -1 188 1 873 152 0 104 chr20 20639864 20639981 -46028024 + MER5A DNA MER1_type 61 189 0 484 299 42 69 chr20 20640472 20640733 -46027272 - MIR SINE MIR -3 259 6 1930 209 58 2 chr20 20640748 20641164 -46026841 + L1MC1 LINE L1 232 670 -5756 9795 214 46 20 chr20 20641165 20641859 -46026146 + L1MC1 LINE L1 2042 2716 -3897 1968 43 0 0 chr20 20641859 20642093 -46025912 + L1PA3 LINE L1 5908 6141 -14 9795 214 46 20 chr20 20642093 20645468 -46022537 + L1MC1 LINE L1 2716 6241 -372 2364 128 31 0 chr20 20645468 20645821 -46022184 + THE1B LTR MaLR 1 364 0 9795 214 46 20 chr20 20645821 20646204 -46021801 + L1MC1 LINE L1 6241 6613 0 684 228 111 0 chr20 20646547 20646736 -46021269 - LTR16C LTR ERVL 0 491 282 2174 171 77 2 chr20 20646781 20647208 -46020797 - MER65C LTR ERV1 -2 459 1 281 356 81 0 chr20 20647365 20647525 -46020480 - L2 LINE L2 -208 3064 2892 1794 181 11 14 chr20 20648086 20648434 -46019571 + MLT1A1 LTR MaLR 19 365 0 615 202 87 63 chr20 20648458 20648711 -46019294 - L1MC4 LINE L1 -209 7833 7575 558 78 9 43 chr20 20648731 20648847 -46019158 + (TA)n Simple_repeat Simple_repeat 1 112 0 348 243 9 47 chr20 20648886 20648993 -46019012 + L1MC4 LINE L1 6601 6703 -1339 327 164 0 135 chr20 20649031 20649135 -46018870 + L1MC4 LINE L1 6614 6703 -1339 1236 224 31 0 chr20 20649140 20649466 -46018539 - L1MC4 LINE L1 -472 7570 7235 331 290 101 7 chr20 20649466 20649604 -46018401 - MIR SINE MIR -96 166 16 712 257 78 4 chr20 20649839 20650096 -46017909 + LTR16C LTR ERVL 213 488 -3 489 293 100 0 chr20 20650507 20650746 -46017259 - LTR16A1 LTR ERVL -2 455 193 1667 203 3 0 chr20 20650858 20651159 -46016846 + AluJo SINE Alu 1 302 -10 1037 209 36 81 chr20 20651198 20651628 -46016377 - MLT1B LTR MaLR 0 390 1 204 265 265 10 chr20 20651710 20651808 -46016197 - L3 LINE CR1 -605 972 850 209 399 49 14 chr20 20651862 20652005 -46016000 - MIR3 SINE MIR -23 185 38 1038 152 38 38 chr20 20652839 20653016 -46014989 - L1MA7 LINE L1 -7 6284 6105 2112 146 35 30 chr20 20653016 20653387 -46014618 - THE1C LTR MaLR -2 373 1 1038 152 38 38 chr20 20653387 20653420 -46014585 - L1MA7 LINE L1 -185 6106 6074 1065 230 38 21 chr20 20654130 20654417 -46013588 + LTR16C LTR ERVL 200 491 0 429 283 220 21 chr20 20656378 20656806 -46011199 + L1ME LINE L1 4085 4597 -1549 298 279 71 32 chr20 20656916 20657070 -46010935 + L1ME LINE L1 5008 5167 -979 3702 118 41 6 chr20 20657619 20658151 -46009854 + MER41C LTR ERV1 1 551 -3 801 151 0 118 chr20 20658371 20658583 -46009422 - MER53 DNA DNA 0 189 3 562 194 14 36 chr20 20659129 20659268 -46008737 - LTR37B LTR ERV1 0 468 333 287 239 15 0 chr20 20659292 20659359 -46008646 - LTR37A LTR ERV1 -248 178 111 254 321 29 21 chr20 20659399 20659539 -46008466 - LTR37B LTR ERV1 -327 141 1 244 167 44 78 chr20 20659593 20659683 -46008322 + L1M2 LINE L1 5350 5436 -861 426 301 64 6 chr20 20659692 20659871 -46008134 + L1ME LINE L1 5490 5675 -446 1112 269 95 55 chr20 20659897 20660646 -46007359 - L2 LINE L2 -4 3309 2540 1310 170 42 213 chr20 20660685 20660863 -46007142 - L1MA9 LINE L1 -55 6257 6050 5181 133 69 34 chr20 20660863 20661736 -46006269 + MER4D LTR ERV1 1 903 0 1310 170 42 213 chr20 20661736 20662021 -46005984 - L1MA9 LINE L1 -262 6050 5924 1938 136 3 63 chr20 20662021 20662352 -46005653 - AluJo SINE Alu -1 311 1 1310 170 42 213 chr20 20662352 20662531 -46005474 - L1MA9 LINE L1 -388 5924 5716 332 175 29 124 chr20 20662575 20662712 -46005293 - L2 LINE L2 -843 2471 2348 1859 250 144 12 chr20 20662846 20663415 -46004590 - LTR48B LTR ERV1 0 644 1 3064 189 164 19 chr20 20664098 20664835 -46003170 + MER21B LTR ERV1 1 844 -19 260 239 30 15 chr20 20665287 20665354 -46002651 - L1ME4a LINE L1 -100 6021 5954 1833 141 151 10 chr20 20665354 20665758 -46002247 - MER31B LTR ERV1 0 466 6 1659 231 76 9 chr20 20666049 20666468 -46001537 - MER39 LTR ERV1 -1 706 260 329 315 9 27 chr20 20666691 20666802 -46001203 + MIR3 SINE MIR 67 175 -33 830 282 99 12 chr20 20667659 20668162 -45999843 + L2 LINE L2 2544 3154 -159 427 266 172 0 chr20 20668357 20668485 -45999520 - MER5A DNA MER1_type 0 189 40 3005 188 28 6 chr20 20668485 20669021 -45998984 - LTR39 LTR ERV1 0 783 236 2933 99 46 17 chr20 20669022 20669438 -45998567 + MSTA LTR MaLR 1 428 0 1534 136 0 4 chr20 20669438 20669680 -45998325 + MSTA-int LTR MaLR 1 241 -1410 3613 148 33 42 chr20 20669683 20670358 -45997647 + LTR8 LTR ERV1 1 669 -22 1446 104 78 17 chr20 20670378 20670389 -45997616 - LTR39 LTR ERV1 -538 245 236 2439 152 56 10 chr20 20670389 20670798 -45997207 + MSTA LTR MaLR 1 428 0 1446 104 78 17 chr20 20670798 20671017 -45996988 - LTR39 LTR ERV1 -547 236 1 2203 138 0 0 chr20 20671083 20671395 -45996610 - AluSx SINE Alu 0 312 1 352 279 13 76 chr20 20671455 20671613 -45996392 - MER5B DNA MER1_type -30 148 1 447 19 0 0 chr20 20672010 20672062 -45995943 + (CA)n Simple_repeat Simple_repeat 2 53 0 1178 262 113 15 chr20 20672201 20672529 -45995476 + MLT1G1 LTR MaLR 73 432 -163 951 305 68 24 chr20 20672677 20673103 -45994902 - MLT1J2 LTR MaLR -5 445 1 303 257 27 0 chr20 20673103 20673177 -45994828 + MIR SINE MIR 113 188 -74 245 261 0 81 chr20 20673738 20673849 -45994156 + MIR SINE MIR 119 220 -42 664 248 0 8 chr20 20673873 20674006 -45993999 - AluJo SINE Alu -61 251 120 1929 141 17 10 chr20 20674027 20674326 -45993679 - AluSx SINE Alu -9 303 3 747 188 16 0 chr20 20674441 20674569 -45993436 - AluJo SINE Alu -172 130 1 552 323 109 30 chr20 20674831 20675271 -45992734 + L1ME4a LINE L1 5573 6047 -74 21 0 0 0 chr20 20675343 20675364 -45992641 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr20 20677656 20677684 -45990321 + AT_rich Low_complexity Low_complexity 1 28 0 238 287 156 54 chr20 20678676 20678843 -45989162 + MIR3 SINE MIR 20 203 -5 4570 39 2 0 chr20 20679166 20679679 -45988326 - L1PA5 LINE L1 -5 6149 5636 194 260 78 39 chr20 20680622 20680699 -45987306 - L3 LINE CR1 -572 1005 926 14955 165 28 18 chr20 20681071 20682591 -45985414 - L1PB1 LINE L1 -2 6865 5362 207 0 0 0 chr20 20682591 20682614 -45985391 + (TG)n Simple_repeat Simple_repeat 2 24 0 2019 119 7 7 chr20 20682614 20682899 -45985106 - AluSg SINE Alu -25 285 1 14955 165 28 18 chr20 20682899 20685776 -45982229 - L1PB1 LINE L1 -1504 5363 2411 * 31513 112 7 23 chr20 20685772 20692240 -45975765 - L1PA7 LINE L1 0 6469 8 6986 121 33 10 chr20 20692246 20693853 -45974152 - L1PB1 LINE L1 -4436 2427 636 1127 170 5 5 chr20 20693855 20694055 -45973950 - L1PB1 LINE L1 -6663 200 1 254 203 57 138 chr20 20694116 20694239 -45973766 + MLT1K LTR MaLR 190 302 -286 347 301 87 82 chr20 20694460 20694849 -45973156 + L1ME4a LINE L1 4017 4407 -1739 396 290 59 25 chr20 20695065 20695303 -45972702 + L1ME4a LINE L1 5637 5882 -239 652 252 165 21 chr20 20695620 20695875 -45972130 - MLT1F LTR MaLR 0 542 325 330 26 0 0 chr20 20695875 20695914 -45972091 + (GA)n Simple_repeat Simple_repeat 2 40 0 652 252 165 21 chr20 20695914 20696055 -45971950 - MLT1F LTR MaLR -217 325 43 248 316 13 0 chr20 20697273 20697352 -45970653 + (CA)n Simple_repeat Simple_repeat 1 80 0 865 231 102 9 chr20 20699004 20699229 -45968776 + MIR SINE MIR 17 262 0 1829 183 34 17 chr20 20699320 20699675 -45968330 - MLT1A1 LTR MaLR -4 361 1 21 36 0 0 chr20 20699773 20699801 -45968204 + AT_rich Low_complexity Low_complexity 1 28 0 41 72 0 0 chr20 20699811 20699894 -45968111 + AT_rich Low_complexity Low_complexity 1 83 0 26726 20 0 0 chr20 20699895 20704319 -45963686 - L1HS LINE L1 -2 6153 1731 34 79 0 0 chr20 20704334 20704410 -45963595 + AT_rich Low_complexity Low_complexity 1 76 0 206 313 60 0 chr20 20704666 20704749 -45963256 - MIR3 SINE MIR -4 204 117 696 203 16 0 chr20 20706307 20706435 -45961570 + FLAM_A SINE Alu 2 131 -2 216 176 39 0 chr20 20706590 20706641 -45961364 + (TTAAA)n Simple_repeat Simple_repeat 5 57 0 950 195 66 22 chr20 20706671 20706897 -45961108 - MIR SINE MIR -13 249 14 442 301 32 0 chr20 20707439 20707562 -45960443 + MER5A DNA MER1_type 1 127 -62 3790 201 84 11 chr20 20707567 20708426 -45959579 + MER63C DNA MER1_type 1 922 -8 345 133 17 0 chr20 20708426 20708486 -45959519 + MER5A DNA MER1_type 129 189 0 900 303 75 19 chr20 20708838 20709521 -45958484 - L2 LINE L2 -5 3308 2571 522 148 0 21 chr20 20712122 20712264 -45955741 + (CAAAAA)n Simple_repeat Simple_repeat 5 143 0 1361 97 0 0 chr20 20713120 20713295 -45954710 - AluSg/x SINE Alu -4 306 132 315 0 0 0 chr20 20713489 20713524 -45954481 + (TG)n Simple_repeat Simple_repeat 2 36 0 1070 119 0 0 chr20 20713524 20713667 -45954338 - AluSg/x SINE Alu -27 283 141 4907 161 52 34 chr20 20713870 20714655 -45953350 - L1MC3 LINE L1 0 7785 6976 1867 170 0 16 chr20 20714655 20714967 -45953038 - AluJo SINE Alu -5 307 1 4907 161 52 34 chr20 20714967 20715204 -45952801 - L1MC3 LINE L1 -809 6976 6745 1217 176 13 25 chr20 20715199 20715437 -45952568 - L1MC3 LINE L1 -1492 6293 6059 * 1407 190 161 67 chr20 20715444 20715880 -45952125 + MLT1D LTR MaLR 8 484 -21 1016 132 6 24 chr20 20715880 20716047 -45951958 + MLT1D-int LTR MaLR 2 165 -1206 17680 150 18 25 chr20 20716061 20716284 -45951721 + L1P3 LINE L1 1028 1251 -5210 186 43 0 0 chr20 20716284 20716307 -45951698 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 17680 150 18 25 chr20 20716307 20719386 -45948619 + L1P3 LINE L1 1251 4312 -2149 693 170 9 0 chr20 20719386 20719498 -45948507 - FRAM SINE Alu -29 147 35 829 211 19 147 chr20 20719503 20719890 -45948115 + MLT1J LTR MaLR 42 413 -98 1194 210 29 0 chr20 20719904 20720142 -45947863 - MLT1E1 LTR MaLR 0 654 410 252 254 0 0 chr20 20720143 20720202 -45947803 - MIR SINE MIR -182 80 22 181 156 0 0 chr20 20720226 20720258 -45947747 + MER5A DNA MER1_type 43 74 -115 278 172 229 49 chr20 20720946 20721068 -45946937 + MLT1J LTR MaLR 406 549 0 216 225 70 31 chr20 20721308 20721437 -45946568 + L2 LINE L2 2927 3060 -212 942 248 123 77 chr20 20722114 20722634 -45945371 - MLT1H1 LTR MaLR 0 555 12 2090 139 3 19 chr20 20724015 20724332 -45943673 - AluSx SINE Alu 0 312 1 502 256 103 31 chr20 20724477 20724672 -45943333 - LTR16C LTR ERVL 0 491 283 320 338 6 25 chr20 20725236 20725393 -45942612 + CT-rich Low_complexity Low_complexity 4 157 0 4209 241 101 39 chr20 20725404 20725637 -45942368 - L1MCc LINE L1 -3274 3667 3450 1594 90 22 9 chr20 20725637 20725859 -45942146 - AluY SINE Alu -10 301 77 4209 241 101 39 chr20 20725859 20727186 -45940819 - L1MCc LINE L1 -3491 3450 2207 297 118 0 0 chr20 20727186 20727237 -45940768 + (TG)n Simple_repeat Simple_repeat 2 52 0 4209 241 101 39 chr20 20727237 20728925 -45939080 - L1MCc LINE L1 -4734 2207 21 273 239 42 0 chr20 20729342 20729413 -45938592 + MIR3 SINE MIR 92 165 -43 601 250 57 10 chr20 20729732 20729924 -45938081 + L1ME1 LINE L1 5954 6154 -12 760 279 40 12 chr20 20730291 20730542 -45937463 - MIR SINE MIR -2 260 3 1573 124 28 8 chr20 20730638 20730888 -45937117 - L1PA8 LINE L1 0 6172 5918 221 279 0 16 chr20 20730957 20731018 -45936987 + CT-rich Low_complexity Low_complexity 3 62 0 210 171 0 0 chr20 20731089 20731130 -45936875 + (CA)n Simple_repeat Simple_repeat 1 41 0 381 224 12 0 chr20 20731619 20731704 -45936301 - MER58 DNA MER1_type -3 2417 2332 878 121 0 23 chr20 20731754 20731886 -45936119 + FLAM_C SINE Alu 2 130 -3 274 284 21 53 chr20 20731907 20732002 -45936003 - MER58 DNA MER1_type -249 92 1 375 23 0 0 chr20 20732947 20732991 -45935014 + (TG)n Simple_repeat Simple_repeat 2 45 0 2443 95 0 0 chr20 20733062 20733368 -45934637 + AluSc SINE Alu 1 306 -3 1341 248 108 0 chr20 20735117 20735525 -45932480 - LTR16C LTR ERVL -4 487 36 231 284 43 17 chr20 20735976 20736092 -45931913 - MIR SINE MIR -20 242 124 278 216 0 0 chr20 20737482 20737533 -45930472 - MLT1H LTR MaLR -3 546 496 753 167 31 62 chr20 20737533 20737695 -45930310 + L1MA9 LINE L1 6119 6275 -37 327 148 19 0 chr20 20737702 20737756 -45930249 - MLT1H LTR MaLR -37 512 458 379 240 149 34 chr20 20738428 20738636 -45929369 + L2 LINE L2 3080 3311 -2 232 224 15 30 chr20 20739114 20739181 -45928824 - MIR SINE MIR -117 145 80 43 20 0 0 chr20 20739291 20739341 -45928664 + AT_rich Low_complexity Low_complexity 1 50 0 749 125 0 25 chr20 20739344 20739464 -45928541 - FLAM_C SINE Alu 0 143 27 1950 120 92 90 chr20 20740772 20741205 -45926800 + LTR47A LTR ERVL 1 434 -18 1681 276 73 7 chr20 20741209 20741782 -45926223 + L2 LINE L2 2247 2857 -457 2313 165 93 116 chr20 20741841 20742001 -45926004 + LTR8A LTR ERV1 1 163 -564 1588 156 3 109 chr20 20742001 20742340 -45925665 + AluJb SINE Alu 1 303 -9 2313 165 93 116 chr20 20742340 20742810 -45925195 + LTR8A LTR ERV1 163 614 -113 1962 153 24 0 chr20 20742810 20743104 -45924901 - AluJo SINE Alu -11 301 1 2313 165 93 116 chr20 20743104 20743216 -45924789 + LTR8A LTR ERV1 614 727 0 1041 208 112 4 chr20 20743423 20743664 -45924341 + LTR16C LTR ERVL 207 473 -18 1020 218 97 91 chr20 20744200 20744664 -45923341 - MLT1G1 LTR MaLR -3 592 126 281 216 0 78 chr20 20746274 20746376 -45921629 + GA-rich Low_complexity Low_complexity 3 96 0 2155 115 10 6 chr20 20746509 20746821 -45921184 + AluSq SINE Alu 1 313 0 494 246 24 74 chr20 20746957 20747195 -45920810 - L1ME4a LINE L1 -293 5828 5610 217 303 11 0 chr20 20747844 20747933 -45920072 + MIR SINE MIR 173 262 0 1493 181 4 0 chr20 20747992 20748235 -45919770 + AluJo SINE Alu 1 244 -68 4444 135 29 3 chr20 20748235 20748922 -45919083 + MER50 LTR ERV1 7 711 -23 366 108 0 81 chr20 20748923 20748997 -45919008 + AluJo SINE Alu 235 302 0 369 274 142 67 chr20 20751268 20751655 -45916350 + MLT1H LTR MaLR 118 533 -16 282 280 52 83 chr20 20752694 20752887 -45915118 - MIR3 SINE MIR -7 201 15 230 275 29 0 chr20 20753063 20753132 -45914873 + (TATATG)n Simple_repeat Simple_repeat 2 72 0 646 132 51 10 chr20 20753133 20753412 -45914593 + (TA)n Simple_repeat Simple_repeat 1 290 0 966 104 92 0 chr20 20753555 20753719 -45914286 + L1MA2 LINE L1 6022 6200 -104 200 347 0 10 chr20 20754198 20754296 -45913709 + T-rich Low_complexity Low_complexity 5 101 0 732 221 116 35 chr20 20754497 20754669 -45913336 - MER5A DNA MER1_type 0 189 4 359 233 166 36 chr20 20755583 20755776 -45912229 + LTR16C LTR ERVL 167 384 -107 272 346 37 22 chr20 20756862 20756998 -45911007 + MER5B DNA MER1_type 38 175 -3 304 320 14 20 chr20 20757443 20757590 -45910415 + GA-rich Low_complexity Low_complexity 2 147 0 223 241 13 101 chr20 20758149 20758228 -45909777 - L2 LINE L2 0 3313 3242 313 282 154 0 chr20 20758264 20758381 -45909624 + MER5B DNA MER1_type 6 140 -38 27 29 0 0 chr20 20758386 20758420 -45909585 + AT_rich Low_complexity Low_complexity 1 34 0 764 243 125 46 chr20 20758569 20758849 -45909156 + LTR33A LTR ERVL 222 523 0 249 251 117 74 chr20 20758987 20759150 -45908855 + MER5A DNA MER1_type 1 170 -19 1900 258 34 21 chr20 20761147 20761681 -45906324 - MLT1H1 LTR MaLR 0 555 15 429 222 23 108 chr20 20761695 20761871 -45906134 + L2 LINE L2 3109 3269 -44 3209 78 7 2 chr20 20761871 20762293 -45905712 + L1PA10 LINE L1 5574 5997 -171 538 169 0 0 chr20 20762301 20762384 -45905621 - MIR SINE MIR -133 129 47 384 318 25 86 chr20 20763516 20763878 -45904127 - L2 LINE L2 0 3272 2933 276 320 50 0 chr20 20764121 20764221 -45903784 + L2 LINE L2 3204 3308 -5 1510 278 75 38 chr20 20764224 20764490 -45903515 - MLT1G LTR MaLR 0 590 335 2075 147 39 30 chr20 20764490 20764851 -45903154 - THE1B LTR MaLR 0 364 1 1510 278 75 38 chr20 20764851 20765117 -45902888 - MLT1G LTR MaLR -255 335 38 638 241 74 0 chr20 20765895 20766057 -45901948 - L1MB7 LINE L1 -103 6081 5908 477 323 70 5 chr20 20766567 20766768 -45901237 + MIR SINE MIR 28 241 -21 782 275 10 0 chr20 20766865 20767072 -45900933 - MER3 DNA MER1_type 0 209 1 249 345 35 7 chr20 20767326 20767471 -45900534 - MLT1H LTR MaLR -377 172 24 240 287 85 67 chr20 20767958 20768122 -45899883 + MIR3 SINE MIR 34 200 -8 231 337 87 0 chr20 20769290 20769382 -45898623 - MIR SINE MIR -79 183 84 1192 182 52 10 chr20 20769422 20769729 -45898276 - MER33 DNA MER1_type 0 324 5 259 311 14 0 chr20 20770760 20770834 -45897171 - MER5A DNA MER1_type -106 83 9 358 319 17 17 chr20 20770870 20770986 -45897019 + MER5B DNA MER1_type 8 123 -55 526 233 50 74 chr20 20771060 20771307 -45896698 + MLT1G LTR MaLR 299 590 0 271 296 214 0 chr20 20772333 20772431 -45895574 + MER5C DNA MER1_type 9 127 -197 2142 83 0 51 chr20 20772459 20772771 -45895234 - AluSq SINE Alu -17 296 1 295 215 152 0 chr20 20772776 20772855 -45895150 + MER5C DNA MER1_type 234 324 0 767 232 16 22 chr20 20773041 20773226 -45894779 + MER5A DNA MER1_type 1 184 -5 2462 66 0 0 chr20 20773867 20774172 -45893833 + AluY SINE Alu 1 305 -6 1489 170 39 20 chr20 20774181 20774487 -45893518 + AluJo SINE Alu 1 312 0 416 288 130 0 chr20 20774902 20775048 -45892957 - MER5B DNA MER1_type -13 165 1 421 280 207 0 chr20 20775369 20775519 -45892486 - MER5A DNA MER1_type 0 189 9 700 217 53 0 chr20 20775735 20775887 -45892118 - MER5B DNA MER1_type 0 178 19 815 173 64 17 chr20 20775904 20776077 -45891928 + MER5A DNA MER1_type 8 188 -1 704 253 80 22 chr20 20777485 20777711 -45890294 + MIR SINE MIR 5 247 -15 2222 79 31 0 chr20 20778294 20778586 -45889419 - AluY SINE Alu -10 301 1 6294 55 0 5 chr20 20778782 20779552 -45888453 + L1PA8 LINE L1 5407 6172 0 2482 225 68 69 chr20 20779554 20781238 -45886767 - L1MDb LINE L1 -3942 2464 783 4374 159 58 14 chr20 20781919 20782407 -45885598 - MER6 DNA MER2_type 0 865 325 628 42 21 21 chr20 20782407 20782503 -45885502 + (TTTC)n Simple_repeat Simple_repeat 1 96 0 4374 159 58 14 chr20 20782503 20782843 -45885162 - MER6 DNA MER2_type -540 325 1 408 294 137 62 chr20 20783501 20783642 -45884363 + L1ME4a LINE L1 5543 5672 -449 1690 177 0 25 chr20 20783642 20783959 -45884046 + AluJb SINE Alu 1 309 -3 17966 33 1 3 chr20 20783959 20786854 -45881151 + L1PA4 LINE L1 3263 6155 0 408 294 137 62 chr20 20786854 20787017 -45880988 + L1ME4a LINE L1 5671 5871 -250 1901 76 90 14 chr20 20787220 20787520 -45880485 + AluY SINE Alu 1 311 0 400 250 14 71 chr20 20787822 20787962 -45880043 + L1M4 LINE L1 3850 3981 -2165 6942 50 26 3 chr20 20788051 20789070 -45878935 + L1PA6 LINE L1 5120 6151 -3 1040 217 146 57 chr20 20789159 20789418 -45878587 - L1M4 LINE L1 -1014 5132 4898 1689 115 0 4 chr20 20789418 20789693 -45878312 + AluY SINE Alu 39 312 0 1040 217 146 57 chr20 20789693 20789925 -45878080 - L1M4 LINE L1 -1248 4898 4596 366 297 29 51 chr20 20789983 20790158 -45877847 - L1M4 LINE L1 -2313 3833 3663 516 285 58 55 chr20 20790290 20790777 -45877228 - HAL1 LINE L1 -840 1667 1180 673 273 6 11 chr20 20791083 20791259 -45876746 + MER5B DNA MER1_type 3 177 -1 1531 212 21 9 chr20 20791821 20792151 -45875854 + L1ME1 LINE L1 5828 6161 -5 271 357 171 27 chr20 20792179 20792512 -45875493 + L2 LINE L2 2871 3251 -21 1904 139 3 10 chr20 20793631 20793932 -45874073 - AluJo SINE Alu -13 299 1 267 191 0 15 chr20 20794281 20794349 -45873656 - MER116 DNA Mariner 0 80 14 * 3700 238 122 23 chr20 20794347 20794415 -45873590 - Charlie7 DNA MER1_type -445 2167 2107 1611 165 0 21 chr20 20794415 20794738 -45873267 - AluJb SINE Alu 0 321 5 3700 238 122 23 chr20 20794738 20796014 -45871991 - Charlie7 DNA MER1_type -505 2107 689 610 239 72 6 chr20 20796021 20796188 -45871817 - MER105 DNA DNA -21 183 6 2001 127 26 52 chr20 20796193 20796578 -45871427 - THE1C LTR MaLR 0 375 1 348 308 92 48 chr20 20796603 20796853 -45871152 - Charlie7 DNA MER1_type -2347 265 5 183 80 0 0 chr20 20796893 20796918 -45871087 + (TTTA)n Simple_repeat Simple_repeat 3 27 0 332 284 8 24 chr20 20797549 20797676 -45870329 - MLT2E LTR ERVL -26 602 478 1775 153 0 25 chr20 20798285 20798599 -45869406 - AluJo SINE Alu -6 306 1 24 0 0 0 chr20 20798601 20798625 -45869380 + AT_rich Low_complexity Low_complexity 1 24 0 21 82 0 0 chr20 20798822 20798871 -45869134 + AT_rich Low_complexity Low_complexity 1 49 0 209 265 20 0 chr20 20799952 20800001 -45868004 + CT-rich Low_complexity Low_complexity 1 50 0 2003 225 99 26 chr20 20800027 20800632 -45867373 + L1ME3A LINE L1 5522 6170 0 1422 261 80 25 chr20 20802090 20802603 -45865402 - MER90 LTR ERV1 0 575 35 339 342 194 10 chr20 20802768 20802964 -45865041 + MIR SINE MIR 1 232 -30 589 222 104 0 chr20 20803712 20803847 -45864158 + MER5A DNA MER1_type 1 149 -40 908 81 40 0 chr20 20803852 20803976 -45864029 + AluY SINE Alu 1 129 -182 1318 119 0 0 chr20 20804012 20804206 -45863799 + AluY SINE Alu 118 311 0 228 91 30 0 chr20 20804216 20804249 -45863756 + MER5A DNA MER1_type 156 189 0 3383 189 13 99 chr20 20805089 20806329 -45861676 + L1MC2 LINE L1 4381 5530 -743 1186 151 5 0 chr20 20806341 20806533 -45861472 + L1PB1 LINE L1 3 195 -6668 15033 149 52 11 chr20 20806541 20810766 -45857239 + L1PB1 LINE L1 636 5187 -1680 207 0 0 0 chr20 20810766 20810789 -45857216 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 15033 149 52 11 chr20 20810789 20812543 -45855462 + L1PB1 LINE L1 5187 6867 0 3055 156 80 12 chr20 20812555 20813133 -45854872 + L1MC2 LINE L1 5525 6141 -203 1706 147 107 21 chr20 20813929 20814256 -45853749 + THE1B LTR MaLR 1 355 -9 11430 106 10 5 chr20 20814256 20815826 -45852179 + THE1B-int LTR MaLR 3 1580 0 2240 113 29 69 chr20 20815826 20816205 -45851800 + THE1B LTR MaLR 1 364 0 1815 185 70 0 chr20 20816307 20816621 -45851384 + MER1B DNA MER1_type 2 337 -2 225 336 69 26 chr20 20816623 20816692 -45851313 - LTR16C LTR ERVL -269 222 145 1285 186 110 52 chr20 20816692 20817037 -45850968 + MLT1A1 LTR MaLR 1 365 0 225 336 69 26 chr20 20817037 20817083 -45850922 - LTR16C LTR ERVL -346 145 102 1514 203 73 23 chr20 20817977 20818331 -45849674 - MLT1A2 LTR MaLR 0 374 3 1022 277 69 35 chr20 20818504 20818929 -45849076 - LTR33 LTR ERVL -36 485 41 1676 178 38 44 chr20 20818929 20819084 -45848921 + MLT1A1 LTR MaLR 1 155 -210 2243 108 10 3 chr20 20819084 20819391 -45848614 + AluSc SINE Alu 1 309 0 1676 178 38 44 chr20 20819391 20819600 -45848405 + MLT1A1 LTR MaLR 155 363 -2 1022 277 69 35 chr20 20819600 20819636 -45848369 - LTR33 LTR ERVL -480 41 8 1728 295 81 5 chr20 20819792 20820395 -45847610 - ERVL LTR ERVL -796 4968 4320 213 303 51 67 chr20 20820925 20821103 -45846902 + MIR SINE MIR 20 194 -68 354 215 43 11 chr20 20822002 20822095 -45845910 + MLT1L LTR MaLR 195 290 -325 274 250 15 0 chr20 20822312 20822380 -45845625 + MLT1L LTR MaLR 2 70 -545 235 105 0 0 chr20 20823392 20823437 -45844568 + HSMAR1 DNA Mariner 1 45 -35 299 257 14 0 chr20 20823513 20823587 -45844418 - L2 LINE L2 -5 3308 3234 807 250 45 5 chr20 20825735 20825995 -45842010 - L1ME3 LINE L1 -7 6163 5881 379 202 67 11 chr20 20825997 20826086 -45841919 - L1ME3 LINE L1 -454 5708 5615 431 233 16 23 chr20 20826264 20826393 -45841612 + MIR SINE MIR 42 169 -93 2484 231 100 19 chr20 20826403 20826527 -45841478 - MER97a DNA MER1_type? -14 880 767 2375 76 3 0 chr20 20826527 20826817 -45841188 - AluY SINE Alu -20 291 1 2484 231 100 19 chr20 20826817 20827425 -45840580 - MER97a DNA MER1_type? -127 767 89 793 261 153 68 chr20 20827515 20828266 -45839739 - L2 LINE L2 -6 3307 2621 378 0 0 0 chr20 20828266 20828308 -45839697 + (TG)n Simple_repeat Simple_repeat 1 42 0 793 261 153 68 chr20 20828308 20828659 -45839346 - L2 LINE L2 -692 2621 2301 1521 198 40 17 chr20 20828659 20829012 -45838993 + MLT1A1 LTR MaLR 5 365 0 793 261 153 68 chr20 20829012 20829206 -45838799 - L2 LINE L2 -1012 2301 1917 28 61 0 0 chr20 20829312 20829361 -45838644 + AT_rich Low_complexity Low_complexity 1 49 0 1182 266 114 50 chr20 20830405 20830500 -45837505 + L2 LINE L2 2251 2338 -975 2061 179 8 16 chr20 20830500 20830710 -45837295 - MLT1A1 LTR MaLR 0 365 158 2838 0 0 10 chr20 20830710 20831014 -45836991 - AluYa5 SINE Alu -10 301 1 2061 179 8 16 chr20 20831014 20831171 -45836834 - MLT1A1 LTR MaLR -207 158 1 1182 266 114 50 chr20 20831171 20831924 -45836081 + L2 LINE L2 2338 3155 -158 19728 91 25 3 chr20 20831947 20834594 -45833411 + Charlie3 DNA MER1_type 1 2706 -4 454 163 12 0 chr20 20834633 20834719 -45833286 + MIR SINE MIR 81 167 -95 496 219 38 38 chr20 20834762 20834922 -45833083 + L2 LINE L2 3153 3312 -1 3187 56 0 2 chr20 20835090 20835486 -45832519 + L1PA7 LINE L1 5754 6148 -6 909 207 6 0 chr20 20835491 20835655 -45832350 + FRAM SINE Alu 1 163 -13 2430 74 7 0 chr20 20836012 20836309 -45831696 + AluY SINE Alu 1 299 -12 2113 100 0 31 chr20 20836791 20837108 -45830897 - AluSq SINE Alu 0 308 1 325 258 11 0 chr20 20837514 20837607 -45830398 + MIR SINE MIR 101 194 -68 7860 12 10 0 chr20 20837796 20838681 -45829324 - L1PA2 LINE L1 0 6155 5262 6265 18 0 0 chr20 20838680 20839395 -45828610 + L1PA2 LINE L1 4528 5242 -904 * 371 273 123 79 chr20 20841302 20841633 -45826372 + LTR16C LTR ERVL 72 422 -69 2346 125 30 22 chr20 20841633 20841994 -45826011 + THE1B LTR MaLR 1 364 0 371 273 123 79 chr20 20841994 20842028 -45825977 + LTR16C LTR ERVL 422 453 -38 2252 89 0 14 chr20 20842733 20843024 -45824981 - AluSq SINE Alu -16 297 11 443 222 40 8 chr20 20843136 20843262 -45824743 - MER5B DNA MER1_type -2 176 47 2234 113 3 0 chr20 20843301 20843593 -45824412 + AluSx SINE Alu 1 293 -19 1353 206 32 83 chr20 20844554 20844985 -45823020 - MER63B DNA MER1_type -8 428 20 477 278 35 0 chr20 20845535 20845679 -45822326 + LTR16C LTR ERVL 311 459 -32 228 219 37 0 chr20 20846277 20846359 -45821646 + (TA)n Simple_repeat Simple_repeat 1 85 0 308 323 21 0 chr20 20846377 20846470 -45821535 - L1MC4 LINE L1 -1333 6709 6615 195 220 0 0 chr20 20846471 20846521 -45821484 + (TATATG)n Simple_repeat Simple_repeat 4 53 0 437 158 33 0 chr20 20846542 20846662 -45821343 + (TATAG)n Simple_repeat Simple_repeat 2 125 0 198 236 0 0 chr20 20846748 20846803 -45821202 + (TATG)n Simple_repeat Simple_repeat 2 56 0 367 263 60 15 chr20 20847221 20847354 -45820651 - LTR33A LTR ERVL -3 520 382 327 160 32 0 chr20 20847460 20847554 -45820451 + GA-rich Low_complexity Low_complexity 1 97 0 423 303 109 76 chr20 20847896 20848371 -45819634 - LTR67 LTR ERVL -12 545 55 417 286 135 5 chr20 20849750 20849942 -45818063 - MIR SINE MIR -26 236 20 885 176 136 0 chr20 20850479 20850655 -45817350 + MER20 DNA MER1_type 2 201 -18 280 174 0 72 chr20 20851279 20851348 -45816657 + L2 LINE L2 3209 3272 0 218 238 63 0 chr20 20851359 20851422 -45816583 - MIR SINE MIR -76 132 66 214 308 108 31 chr20 20851507 20851637 -45816368 + L2 LINE L2 3119 3258 -14 305 24 24 0 chr20 20851841 20851883 -45816122 + (CA)n Simple_repeat Simple_repeat 2 44 0 738 197 8 0 chr20 20851884 20852011 -45815994 + MER82 DNA MER2_type 2 129 -524 761 262 56 97 chr20 20852586 20853029 -45814976 - MLT1H LTR MaLR -113 436 12 720 220 145 16 chr20 20853605 20853791 -45814214 + MER63A DNA MER1_type 1 210 0 319 328 188 16 chr20 20854015 20854207 -45813798 - MIR SINE MIR -36 226 2 2749 208 107 7 chr20 20854427 20855101 -45812904 - MER63C DNA MER1_type 0 930 190 912 203 104 111 chr20 20855101 20855506 -45812499 + L1MEc LINE L1 37 438 -5958 287 314 53 35 chr20 20856489 20856658 -45811347 - MIR SINE MIR -71 191 20 561 289 53 5 chr20 20856859 20857046 -45810959 + MIR SINE MIR 7 202 -60 24 67 0 0 chr20 20857990 20858035 -45809970 + AT_rich Low_complexity Low_complexity 1 45 0 225 265 39 0 chr20 20858417 20858519 -45809486 - L1ME LINE L1 -274 5896 5791 266 300 107 9 chr20 20858903 20859136 -45808869 - L1MDa LINE L1 -4439 2101 1846 2307 97 0 7 chr20 20859252 20859550 -45808455 - AluSc SINE Alu -13 296 1 965 157 25 91 chr20 20859654 20859896 -45808109 - MER96B DNA MER1_type? 0 417 192 280 301 110 18 chr20 20861901 20862064 -45805941 + MER3 DNA MER1_type 32 209 0 * 967 169 87 0 chr20 20862064 20862109 -45805896 - MER3 DNA MER1_type -147 62 2 437 181 0 43 chr20 20862714 20862808 -45805197 + MLT1G LTR MaLR 1 90 -465 1857 222 36 67 chr20 20862824 20863320 -45804685 - MLT1E2 LTR MaLR -9 617 137 1539 235 83 24 chr20 20863434 20863902 -45804103 + MLT1G LTR MaLR 95 590 0 377 340 65 28 chr20 20864040 20864331 -45803674 - L2 LINE L2 -4 3309 3008 1704 114 30 134 chr20 20864997 20865399 -45802606 + THE1B LTR MaLR 1 360 -4 181 161 0 0 chr20 20865870 20865901 -45802104 - MIR SINE MIR -133 75 45 2226 102 0 58 chr20 20866409 20866734 -45801271 - AluSx SINE Alu -6 306 1 816 157 0 0 chr20 20867888 20868003 -45800002 + AluJb SINE Alu 1 115 -197 244 171 11 11 chr20 20868012 20868100 -45799905 + (TA)n Simple_repeat Simple_repeat 1 88 0 6417 15 0 1 chr20 20868377 20869064 -45798941 - L1PA2 LINE L1 -2 6153 5468 575 300 113 19 chr20 20869271 20869634 -45798371 + L1ME4a LINE L1 5725 6121 0 915 291 108 25 chr20 20869857 20870255 -45797750 - LTR16C LTR ERVL -59 432 2 205 376 40 7 chr20 20871723 20871872 -45796133 + MIR SINE MIR 105 258 -4 1070 58 32 32 chr20 20871873 20872151 -45795854 + (TCTA)n Simple_repeat Simple_repeat 1 278 0 447 275 157 63 chr20 20872484 20872866 -45795139 + MLT1J LTR MaLR 39 456 -55 613 122 0 47 chr20 20873104 20873211 -45794794 - L1PA13 LINE L1 -4 6159 6058 22 56 0 0 chr20 20873380 20873416 -45794589 + AT_rich Low_complexity Low_complexity 1 36 0 2182 58 0 0 chr20 20873568 20873827 -45794178 - AluY SINE Alu -8 303 45 216 0 0 0 chr20 20873862 20873886 -45794119 + (TG)n Simple_repeat Simple_repeat 2 25 0 1893 64 24 8 chr20 20873886 20874136 -45793869 - AluSx SINE Alu -23 289 36 206 162 0 0 chr20 20874566 20874603 -45793402 - L2 LINE L2 -17 3255 3219 22 0 0 0 chr20 20874623 20874645 -45793360 + GC_rich Low_complexity Low_complexity 1 22 0 1740 157 12 104 chr20 20874802 20875204 -45792801 - MLT1A1 LTR MaLR 0 365 1 3092 151 31 6 chr20 20875246 20875764 -45792241 - L1MA9 LINE L1 0 7272 6742 243 0 0 0 chr20 20875764 20875791 -45792214 + (TG)n Simple_repeat Simple_repeat 2 28 0 * 302 169 15 0 chr20 20875790 20875855 -45792150 + (TA)n Simple_repeat Simple_repeat 1 66 0 726 185 37 0 chr20 20875912 20876047 -45791958 - L1M3e LINE L1 -6783 247 108 * 4928 166 13 13 chr20 20876044 20877318 -45790687 - L1MA9 LINE L1 -561 6711 5431 7517 184 28 10 chr20 20877737 20879293 -45788712 - L1MA9 LINE L1 -1693 5413 3829 1251 225 107 17 chr20 20879297 20879706 -45788299 - L1MA9 LINE L1 -6313 717 7 397 222 74 28 chr20 20879699 20879807 -45788198 - L1MD3 LINE L1 -14 7981 7869 * 181 295 39 51 chr20 20881047 20881125 -45786880 - L3b LINE CR1 -114 1469 1393 272 27 27 0 chr20 20881443 20881480 -45786525 + (TG)n Simple_repeat Simple_repeat 1 38 0 201 196 0 0 chr20 20881686 20881732 -45786273 + CT-rich Low_complexity Low_complexity 2 47 0 198 0 0 0 chr20 20882191 20882213 -45785792 + (TA)n Simple_repeat Simple_repeat 2 23 0 838 156 0 0 chr20 20882232 20882354 -45785651 - AluSg/x SINE Alu -35 277 156 1593 207 82 24 chr20 20882367 20882783 -45785222 - L1ME2 LINE L1 -64 6100 5661 2018 216 64 28 chr20 20884522 20884754 -45783251 - MER77 LTR ERV1 -5 600 378 1442 232 46 25 chr20 20884754 20885120 -45782885 + MLT1A2 LTR MaLR 1 374 0 2018 216 64 28 chr20 20885120 20885415 -45782590 - MER77 LTR ERV1 -227 378 54 1689 187 65 67 chr20 20885441 20885993 -45782012 - L1MC5 LINE L1 -240 7721 7171 241 219 85 37 chr20 20886795 20886877 -45781128 + LTR25 LTR ERV1 2 87 -707 1905 158 3 7 chr20 20886969 20887260 -45780745 + AluSx SINE Alu 1 290 -22 2121 151 19 24 chr20 20888407 20888784 -45779221 - THE1C LTR MaLR 0 375 1 11023 101 48 14 chr20 20888784 20890311 -45777694 - THE1C-int LTR MaLR 0 1580 1 2007 154 40 27 chr20 20890311 20890681 -45777324 - THE1C LTR MaLR 0 375 1 1648 246 211 9 chr20 20891820 20892466 -45775539 + LTR50 LTR ERVL 18 793 -2 1598 209 107 17 chr20 20893506 20893928 -45774077 + MLT1C LTR MaLR 6 465 -2 229 118 118 32 chr20 20893978 20894071 -45773934 + (TTTAA)n Simple_repeat Simple_repeat 3 103 0 2105 179 79 28 chr20 20894757 20895226 -45772779 + MLT1D LTR MaLR 6 498 -7 367 286 34 42 chr20 20895389 20895508 -45772497 + L2 LINE L2 3154 3271 -1 250 328 143 0 chr20 20895676 20895795 -45772210 - MIR SINE MIR -36 226 91 376 294 106 12 chr20 20896216 20896376 -45771629 + MIR SINE MIR 2 176 -86 22 0 0 0 chr20 20896389 20896411 -45771594 + AT_rich Low_complexity Low_complexity 1 22 0 10518 226 54 60 chr20 20896660 20897523 -45770482 + L1MC2 LINE L1 19 886 -5738 2419 41 6 41 chr20 20897523 20897839 -45770166 - AluY SINE Alu -6 305 1 10518 226 54 60 chr20 20897839 20899512 -45768493 + L1MC2 LINE L1 886 2568 -4056 1472 205 6 22 chr20 20899512 20899824 -45768181 + AluJo SINE Alu 1 307 -5 10518 226 54 60 chr20 20899824 20903505 -45764500 + L1MC2 LINE L1 2568 6197 -427 438 233 84 40 chr20 20903520 20903671 -45764334 - MIR SINE MIR -62 146 16 412 280 71 71 chr20 20903836 20904061 -45763944 - LTR33A LTR ERVL -231 292 68 335 253 106 86 chr20 20904667 20904727 -45763278 - L1ME3A LINE L1 -204 5949 5892 2091 98 34 142 chr20 20904727 20905135 -45762870 - THE1B LTR MaLR 0 364 1 335 253 106 86 chr20 20905135 20905434 -45762571 - L1ME3A LINE L1 -261 5892 5583 7799 117 42 11 chr20 20905450 20906644 -45761361 - Tigger3b DNA MER2_type 0 1231 1 333 239 24 44 chr20 20906684 20906879 -45761126 - L1ME3A LINE L1 -576 5569 5339 1453 231 55 14 chr20 20906879 20907225 -45760780 - MLT1A1 LTR MaLR 0 365 6 314 276 92 10 chr20 20907231 20907427 -45760578 - L1M4 LINE L1 -786 5360 5149 485 270 102 102 chr20 20907598 20908391 -45759614 - L1M4 LINE L1 -2289 3857 3065 415 264 111 43 chr20 20908730 20908965 -45759040 - L1M4 LINE L1 -3669 2477 2227 1961 93 93 0 chr20 20909189 20909459 -45758546 - AluSq SINE Alu -18 295 1 5981 232 63 32 chr20 20909619 20911572 -45756433 - L1ME3A LINE L1 -920 5209 3196 39473 77 5 8 chr20 20911573 20917744 -45750261 - L1PA5 LINE L1 -3 6151 4 1864 243 35 22 chr20 20917745 20918433 -45749572 - L1ME3A LINE L1 -2915 3214 2518 541 283 83 108 chr20 20918547 20918861 -45749144 - L1ME3A LINE L1 -5060 1059 739 225 0 0 0 chr20 20918861 20918886 -45749119 + (TTG)n Simple_repeat Simple_repeat 3 27 0 541 283 83 108 chr20 20918886 20919513 -45748492 - L1ME3A LINE L1 -5380 739 142 290 309 24 8 chr20 20919880 20920003 -45748002 + A-rich Low_complexity Low_complexity 4 128 0 2144 156 32 0 chr20 20920580 20920958 -45747047 + MLT1B LTR MaLR 1 390 0 470 265 95 65 chr20 20921121 20921446 -45746559 + MLT1H LTR MaLR 95 429 -120 2137 236 41 12 chr20 20921883 20921914 -45746091 + L1MCb LINE L1 3 32 -6013 2398 46 0 7 chr20 20921914 20922240 -45745765 + AluY SINE Alu 1 324 0 2137 236 41 12 chr20 20922240 20923187 -45744818 + L1MCb LINE L1 32 1069 -4976 8884 140 26 1 chr20 20923187 20924623 -45743382 - Tigger1 DNA MER2_type 0 2418 946 301 180 0 0 chr20 20924626 20924676 -45743329 - Tigger1 DNA MER2_type -2368 50 1 421 196 0 0 chr20 20924684 20924781 -45743224 + L1MA8 LINE L1 6192 6288 -3 338 114 71 29 chr20 20924793 20924863 -45743142 + L1MA9 LINE L1 6240 6312 0 2885 219 78 26 chr20 20924867 20925316 -45742689 + L1MCb LINE L1 1065 1489 -5075 207 69 0 0 chr20 20925316 20925345 -45742660 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 2885 219 78 26 chr20 20925345 20925390 -45742615 + L1MCb LINE L1 1489 1530 -5034 2081 146 0 0 chr20 20925390 20925698 -45742307 - AluSx SINE Alu -4 308 1 2885 219 78 26 chr20 20925698 20926470 -45741535 + L1MCb LINE L1 1530 2260 -4304 2958 168 0 2 chr20 20926470 20926957 -45741048 + MER66B LTR ERV1 1 486 0 2885 219 78 26 chr20 20926957 20927790 -45740215 + L1MCb LINE L1 2260 3383 -3181 813 235 92 49 chr20 20928501 20928829 -45739176 + MER2 DNA MER2_type 2 343 -1 893 176 83 3 chr20 20929126 20929411 -45738594 - MLT1B LTR MaLR 0 390 1 1741 162 84 6 chr20 20931994 20932328 -45735677 + MER46B DNA MER2_type 2 236 0 424 250 7 4 chr20 20932328 20932469 -45735536 - MIR SINE MIR -2 260 69 2780 225 81 10 chr20 20932503 20933928 -45734077 - L1MB4 LINE L1 0 6180 4646 1528 197 41 3 chr20 20933977 20934292 -45733713 - L1MC1 LINE L1 -26 6587 6261 5701 73 5 5 chr20 20934322 20934713 -45733292 + L1PB1 LINE L1 5388 5781 -370 189 0 0 0 chr20 20934713 20934734 -45733271 + (TA)n Simple_repeat Simple_repeat 2 22 0 5701 73 5 5 chr20 20934734 20935106 -45732899 + L1PB1 LINE L1 5780 6151 0 3350 151 24 7 chr20 20935343 20935940 -45732065 - L1MC1 LINE L1 -425 6188 5582 1350 172 0 38 chr20 20935941 20936203 -45731802 - AluJb SINE Alu -5 307 56 829 200 89 0 chr20 20936203 20936393 -45731612 - L1MC1 LINE L1 -851 5575 5369 9031 217 50 21 chr20 20936621 20936999 -45731006 - L1MC1 LINE L1 -1069 5357 4991 7663 56 3 1 chr20 20936999 20938751 -45729254 - L1PA6 LINE L1 -5 6149 4396 9031 217 50 21 chr20 20938751 20938802 -45729203 - L1MC1 LINE L1 -1435 4991 4943 2221 133 11 24 chr20 20938802 20939171 -45728834 + THE1B LTR MaLR 1 364 0 9031 217 50 21 chr20 20939171 20939354 -45728651 - L1MC1 LINE L1 -1483 4943 4767 2813 13 0 0 chr20 20939354 20939661 -45728344 - AluY SINE Alu -4 307 1 9031 217 50 21 chr20 20939661 20943325 -45724680 - L1MC1 LINE L1 -1659 4767 802 261 0 0 0 chr20 20943325 20943354 -45724651 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 9031 217 50 21 chr20 20943354 20944159 -45723846 - L1MC1 LINE L1 -5624 802 21 729 237 120 4 chr20 20944160 20944434 -45723571 - L1MEc LINE L1 -1485 4897 4592 2730 241 69 9 chr20 20944434 20945387 -45722618 - L1MEc LINE L1 -2154 4228 3219 189 0 0 0 chr20 20945529 20945550 -45722455 + (TTTA)n Simple_repeat Simple_repeat 4 24 0 1470 194 23 23 chr20 20945550 20945860 -45722145 - MLT1A1 LTR MaLR -55 310 1 277 288 160 52 chr20 20945873 20946217 -45721788 - L1ME LINE L1 -343 5778 5398 932 286 12 20 chr20 20946495 20946750 -45721255 - MIR SINE MIR 0 262 10 9350 201 38 29 chr20 20946822 20947497 -45720508 - L1PA16 LINE L1 -20 6146 5479 2069 128 7 3 chr20 20947497 20947801 -45720204 - AluSc SINE Alu -4 305 1 9350 201 38 29 chr20 20947801 20950537 -45717468 - L1PA16 LINE L1 -687 5479 2700 2487 258 36 49 chr20 20950536 20951175 -45716830 - L1MEc LINE L1 -3149 3233 2587 * 2827 10 0 0 chr20 20951175 20951482 -45716523 - AluYb8 SINE Alu -11 307 1 2487 258 36 49 chr20 20951482 20952253 -45715752 - L1MEc LINE L1 -3795 2587 1870 1729 240 32 40 chr20 20952272 20952801 -45715204 - L1MA9 LINE L1 -38 6274 5750 2654 232 80 39 chr20 20952826 20953541 -45714464 - L1MEc LINE L1 -4709 1675 912 983 54 8 0 chr20 20953541 20953671 -45714334 + L1PB1 LINE L1 6021 6151 0 2654 232 80 39 chr20 20953671 20953885 -45714120 - L1MEc LINE L1 -5472 912 708 756 153 73 0 chr20 20953896 20954020 -45713985 + FLAM_C SINE Alu 1 133 -10 975 237 231 0 chr20 20954157 20954499 -45713506 + L1MC4a LINE L1 7099 7519 -289 617 278 15 0 chr20 20954495 20954693 -45713312 + L1MD3 LINE L1 7785 7985 -10 * 1733 147 0 0 chr20 20954711 20954962 -45713043 + AluSx SINE Alu 47 297 -15 297 189 0 122 chr20 20955624 20955714 -45712291 - MER5A DNA MER1_type -107 82 4 202 263 182 20 chr20 20956464 20956563 -45711442 - MIR SINE MIR -122 140 26 29 28 0 0 chr20 20956783 20956819 -45711186 + AT_rich Low_complexity Low_complexity 1 36 0 233 282 161 24 chr20 20957604 20957728 -45710277 - MER5A DNA MER1_type 0 189 49 679 271 131 31 chr20 20958180 20958501 -45709504 + L1ME3 LINE L1 5802 6154 -8 2410 104 0 0 chr20 20958505 20958813 -45709192 - AluSx SINE Alu -4 308 1 187 83 21 42 chr20 20962392 20962440 -45705565 + (CCG)n Simple_repeat Simple_repeat 2 48 0 189 107 0 0 chr20 20962533 20962561 -45705444 + (GGA)n Simple_repeat Simple_repeat 2 29 0 222 269 0 0 chr20 20962575 20962642 -45705363 + GA-rich Low_complexity Low_complexity 2 68 0 222 188 12 38 chr20 20962685 20962765 -45705240 + (CCG)n Simple_repeat Simple_repeat 2 79 0 213 39 0 0 chr20 20962800 20962826 -45705179 + (CCG)n Simple_repeat Simple_repeat 1 26 0 199 0 65 0 chr20 20963864 20963895 -45704110 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 216 200 40 53 chr20 20964739 20964814 -45703191 + CT-rich Low_complexity Low_complexity 2 75 0 190 314 0 0 chr20 20965211 20965262 -45702743 - MIR SINE MIR -132 130 80 267 202 32 0 chr20 20965493 20965587 -45702418 + CT-rich Low_complexity Low_complexity 4 100 0 206 271 35 35 chr20 20965897 20965982 -45702023 - MIR SINE MIR 0 262 178 1250 162 31 31 chr20 20966337 20966566 -45701439 + AluJo SINE Alu 84 312 0 233 296 25 0 chr20 20966572 20966653 -45701352 - L1MC4 LINE L1 -1347 6695 6613 1503 258 34 59 chr20 20966670 20967262 -45700743 - MLT1G1 LTR MaLR -4 591 15 244 258 0 30 chr20 20967333 20967399 -45700606 + (CATA)n Simple_repeat Simple_repeat 1 64 0 314 269 83 36 chr20 20967820 20968013 -45699992 + L2 LINE L2 3095 3296 -17 263 159 0 0 chr20 20968161 20968205 -45699800 - MADE1 DNA Mariner 0 80 37 183 324 15 0 chr20 20968812 20968880 -45699125 - MIR SINE MIR -122 140 72 408 282 74 15 chr20 20969077 20969279 -45698726 + LTR33 LTR ERVL 297 510 -11 393 281 36 30 chr20 20969573 20969841 -45698164 + L1MC/D LINE L1 5314 5576 -2340 612 225 6 55 chr20 20970631 20970813 -45697192 - MER5B DNA MER1_type -2 176 4 1059 155 12 0 chr20 20970989 20971150 -45696855 - FRAM SINE Alu -14 162 1 3214 260 62 45 chr20 20971155 20972519 -45695486 - HAL1 LINE L1 -543 1964 577 817 93 16 0 chr20 20972644 20972773 -45695232 + (TTCC)n Simple_repeat Simple_repeat 1 131 0 264 149 90 45 chr20 20972871 20972938 -45695067 - L1MD2 LINE L1 -1 6358 6289 2154 113 3 0 chr20 20972938 20973220 -45694785 + AluSq SINE Alu 1 283 -30 617 201 65 0 chr20 20973238 20973377 -45694628 - L1MD2 LINE L1 -56 6303 6156 3235 163 101 12 chr20 20973379 20974025 -45693980 - MER44D DNA MER2_type -2 703 1 303 49 0 0 chr20 20974035 20974076 -45693929 + (TG)n Simple_repeat Simple_repeat 1 41 0 571 204 0 0 chr20 20974079 20974182 -45693823 - L1MD2 LINE L1 -221 6138 6036 221 344 11 11 chr20 20974602 20974692 -45693313 - MIR3 SINE MIR -11 197 108 1440 231 48 13 chr20 20975469 20975842 -45692163 - L1ME1 LINE L1 -107 6059 5674 2057 254 31 5 chr20 20975843 20976417 -45691588 - L1ME1 LINE L1 -1983 4163 3575 995 248 17 4 chr20 20976535 20976773 -45691232 - MIR SINE MIR -10 252 12 568 317 60 25 chr20 20976854 20977286 -45690719 - L1ME LINE L1 -413 5708 5262 2514 53 0 20 chr20 20978285 20978585 -45689420 + AluY SINE Alu 1 294 -17 326 314 107 27 chr20 20978680 20979008 -45688997 - L1ME LINE L1 -2326 3820 3467 2204 189 43 32 chr20 20981185 20981678 -45686327 + MLT1D LTR MaLR 1 498 -7 374 252 39 39 chr20 20981800 20981927 -45686078 + L2 LINE L2 3131 3257 -56 258 306 157 8 chr20 20983706 20983840 -45684165 + MIR3 SINE MIR 15 168 -40 567 218 26 57 chr20 20984097 20984290 -45683715 + MER5A DNA MER1_type 3 189 0 250 313 0 0 chr20 20985120 20985184 -45682821 + MER91A DNA MER1_type 110 173 -23 1864 163 0 13 chr20 20986407 20986713 -45681292 + AluJo SINE Alu 11 312 0 1122 248 138 28 chr20 20987940 20988492 -45679513 - L1ME3A LINE L1 0 6170 5552 210 171 0 0 chr20 20988876 20988917 -45679088 + (CA)n Simple_repeat Simple_repeat 1 41 0 25 0 0 0 chr20 20989041 20989066 -45678939 + AT_rich Low_complexity Low_complexity 1 25 0 543 240 101 40 chr20 20990577 20990873 -45677132 - LTR16A1 LTR ERVL -89 368 55 1872 172 82 0 chr20 20992505 20992894 -45675111 - LTR37A LTR ERV1 -1 425 5 1114 297 91 40 chr20 20994672 20995245 -45672760 + L1MEd LINE L1 26 627 -5492 28 61 0 0 chr20 20995277 20995326 -45672679 + AT_rich Low_complexity Low_complexity 1 49 0 648 241 60 99 chr20 20995504 20996039 -45671966 + L1MEd LINE L1 2232 2745 -3384 395 270 51 51 chr20 20996143 20996380 -45671625 + L1MEd LINE L1 3018 3254 -2875 380 151 57 9 chr20 20996668 20996774 -45671231 + (TCTCTG)n Simple_repeat Simple_repeat 4 114 0 276 323 85 5 chr20 20996804 20997027 -45670978 + L1MEd LINE L1 3981 4221 -1908 844 199 105 22 chr20 20997500 20997767 -45670238 + MER33 DNA MER1_type 17 305 -19 237 299 9 28 chr20 20997806 20997913 -45670092 + MIR SINE MIR 70 174 -88 213 94 0 0 chr20 20998043 20998075 -45669930 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 810 224 28 0 chr20 20998227 20998441 -45669564 - Tigger6a DNA MER2_type -20 1063 844 3310 160 20 9 chr20 20998442 20999093 -45668912 + L1MA7 LINE L1 5510 6280 -11 3027 192 125 15 chr20 20999094 20999813 -45668192 - Tigger6a DNA MER2_type -214 869 72 404 307 34 17 chr20 21000718 21000894 -45667111 - MIR SINE MIR -30 232 54 814 255 84 21 chr20 21001333 21001619 -45666386 - LTR16C LTR ERVL 0 491 188 381 141 31 0 chr20 21003958 21004022 -45663983 - Charlie8 DNA MER1_type -2234 183 118 768 246 22 0 chr20 21004728 21004911 -45663094 + MIR SINE MIR 2 188 -74 229 209 105 92 chr20 21005432 21005585 -45662420 + MIR3 SINE MIR 6 160 -48 754 200 39 0 chr20 21005585 21005740 -45662265 + MER33 DNA MER1_type 1 161 -163 1807 158 3 14 chr20 21005741 21006057 -45661948 + AluJo SINE Alu 1 313 0 1862 153 18 21 chr20 21006073 21006412 -45661593 + L1MB8 LINE L1 5808 6145 -33 2211 137 0 0 chr20 21006414 21006721 -45661284 + AluJb SINE Alu 1 307 -5 858 134 43 0 chr20 21006760 21006924 -45661081 + MER33 DNA MER1_type 150 320 -4 874 214 0 12 chr20 21007751 21007919 -45660086 - FRAM SINE Alu 0 166 1 2026 113 7 0 chr20 21008355 21008646 -45659359 + AluSg SINE Alu 5 297 -13 354 296 35 70 chr20 21010170 21010342 -45657663 + MIR SINE MIR 78 243 -19 1566 162 13 44 chr20 21011261 21011576 -45656429 - AluJo SINE Alu -7 305 1 645 252 93 71 chr20 21011862 21012049 -45655956 - MLT1L LTR MaLR -97 518 337 2629 13 0 7 chr20 21012049 21012358 -45655647 + AluY SINE Alu 1 307 -4 645 252 93 71 chr20 21012358 21012579 -45655426 - MLT1L LTR MaLR -278 337 101 351 0 0 0 chr20 21012961 21013000 -45655005 + (TG)n Simple_repeat Simple_repeat 2 40 0 356 156 118 17 chr20 21013884 21014104 -45653901 + AluJb SINE Alu 2 300 -2 2016 91 0 14 chr20 21014399 21014684 -45653321 + AluSx SINE Alu 30 310 -2 620 306 45 4 chr20 21014755 21014997 -45653008 + LTR16C LTR ERVL 240 491 0 477 236 51 82 chr20 21015505 21015700 -45652305 - MLT1K LTR MaLR -34 554 366 225 302 16 0 chr20 21015759 21015822 -45652183 - MLT1K LTR MaLR -341 247 184 190 314 215 16 chr20 21016039 21016160 -45651845 - L2 LINE L2 -20 3293 3149 426 202 71 20 chr20 21016832 21016931 -45651074 + MER69 DNA AcHobo 2421 2524 -2 2049 219 45 105 chr20 21016939 21017986 -45650019 - Charlie7 DNA MER1_type -135 2477 1494 391 291 75 69 chr20 21018000 21018320 -45649685 - Charlie7 DNA MER1_type -2256 356 35 297 306 104 28 chr20 21018395 21018539 -45649466 - MIR3 SINE MIR -7 201 47 880 209 39 0 chr20 21019007 21019189 -45648816 - MER3 DNA MER1_type -18 191 3 428 221 21 0 chr20 21020155 21020250 -45647755 + MER5A DNA MER1_type 9 105 -84 1154 193 138 55 chr20 21020310 21020637 -45647368 - MLT1A1 LTR MaLR 0 365 12 206 184 35 11 chr20 21020690 21020777 -45647228 + GA-rich Low_complexity Low_complexity 1 89 0 5490 87 17 1 chr20 21021163 21021911 -45646094 + L1PB1 LINE L1 5390 6149 -2 412 164 0 0 chr20 21022418 21022485 -45645520 - MER5A DNA MER1_type -119 70 4 180 250 28 0 chr20 21022518 21022554 -45645451 + MIR SINE MIR 41 77 -131 183 182 0 0 chr20 21022867 21022900 -45645105 - L2 LINE L2 -210 3062 3030 1709 163 92 21 chr20 21026288 21026550 -45641455 - MER7A DNA MER2_type -2692 346 57 1725 155 38 0 chr20 21026550 21026840 -45641165 + AluJo SINE Alu 1 301 -11 1709 163 92 21 chr20 21026840 21026902 -45641103 - MER7A DNA MER2_type -2981 57 1 646 278 98 24 chr20 21027072 21027277 -45640728 + MIR SINE MIR 31 250 -12 1128 313 81 7 chr20 21027979 21028388 -45639617 + LTR16C LTR ERVL 53 491 0 231 297 31 0 chr20 21028929 21028993 -45639012 - L2 LINE L2 -9 3263 3198 243 338 35 15 chr20 21029338 21029536 -45638469 + L2 LINE L2 1897 2098 -1216 957 248 11 49 chr20 21030273 21030377 -45637628 - LTR16C LTR ERVL 0 491 385 848 234 24 19 chr20 21030377 21030582 -45637423 - MER63A DNA MER1_type -4 206 1 957 248 11 49 chr20 21030582 21030743 -45637262 - LTR16C LTR ERVL -106 385 236 718 260 73 0 chr20 21031674 21031866 -45636139 - MER58C DNA MER1_type -2 213 8 195 69 0 0 chr20 21032223 21032252 -45635753 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 577 226 97 7 chr20 21033306 21033461 -45634544 - MER3 DNA MER1_type -82 127 6 188 304 104 16 chr20 21033600 21033725 -45634280 + MIR SINE MIR 79 214 -48 247 262 16 0 chr20 21034935 21034996 -45633009 + CT-rich Low_complexity Low_complexity 4 65 0 2059 131 0 0 chr20 21035125 21035430 -45632575 + AluJb SINE Alu 3 307 -5 208 269 71 56 chr20 21036397 21036555 -45631450 - MIR SINE MIR -14 194 43 761 164 7 0 chr20 21036610 21036750 -45631255 - Charlie5 DNA MER1_type -28 2584 2444 986 261 141 20 chr20 21036993 21037391 -45630614 - MLT1J2 LTR MaLR -4 446 1 426 303 122 27 chr20 21037731 21037952 -45630053 + MIR SINE MIR 20 261 -1 1016 207 18 9 chr20 21038709 21038931 -45629074 + MER58A DNA MER1_type 1 224 0 293 296 37 37 chr20 21039762 21039897 -45628108 - MIR3 SINE MIR -63 145 11 667 259 0 0 chr20 21039975 21040137 -45627868 + MER5A DNA MER1_type 28 189 0 371 224 103 17 chr20 21040137 21040248 -45627757 + MER5B DNA MER1_type 19 139 -39 2062 189 0 11 chr20 21040253 21040612 -45627393 + MLT1A1 LTR MaLR 2 356 -9 251 310 0 0 chr20 21042016 21042087 -45625918 + MIR SINE MIR 80 150 -112 1751 196 28 22 chr20 21042653 21043016 -45624989 - MLT1A1 LTR MaLR 0 365 1 2198 106 3 0 chr20 21043301 21043603 -45624402 + AluSq SINE Alu 1 303 -10 1151 119 0 40 chr20 21043808 21043984 -45624021 + MER2 DNA MER2_type 1 169 -176 6073 91 26 31 chr20 21044220 21045134 -45622871 - L1PA10 LINE L1 -5 6163 5254 8233 126 15 5 chr20 21045141 21046445 -45621560 - L1PA10 LINE L1 -1847 4299 2983 2394 160 10 0 chr20 21046449 21046842 -45621163 + L1P LINE L1 2410 2806 -3340 373 222 42 0 chr20 21046843 21046915 -45621090 + MER2 DNA MER2_type 271 345 0 996 199 74 30 chr20 21047214 21047511 -45620494 - L1ME2 LINE L1 -21 6143 5834 228 250 0 16 chr20 21047523 21047587 -45620418 + (CATATA)n Simple_repeat Simple_repeat 6 68 0 622 175 8 24 chr20 21048412 21048538 -45619467 - LTR16C LTR ERVL -15 476 353 185 156 0 22 chr20 21048542 21048587 -45619418 + A-rich Low_complexity Low_complexity 2 45 0 1445 213 22 0 chr20 21048695 21048968 -45619037 - LTR16C LTR ERVL -152 339 61 393 22 0 0 chr20 21049105 21049151 -45618854 + (TG)n Simple_repeat Simple_repeat 2 47 0 797 275 203 15 chr20 21050043 21050520 -45617485 + MLT1F1 LTR MaLR 1 567 0 507 318 133 52 chr20 21051298 21051704 -45616301 - L3 LINE CR1 -5 1572 1134 291 252 25 67 chr20 21052150 21052269 -45615736 + L2 LINE L2 3199 3312 -1 269 281 11 0 chr20 21052706 21052795 -45615210 - L1ME2 LINE L1 -345 5817 5728 4130 103 8 5 chr20 21052931 21053530 -45614475 - L1PA15 LINE L1 -2 6163 5563 269 257 79 10 chr20 21054218 21054319 -45613686 + MIR SINE MIR 60 167 -95 400 271 35 14 chr20 21054340 21054484 -45613521 + MER69A DNA AcHobo 29 175 -2 5632 151 48 1 chr20 21055492 21056826 -45611179 + L1PA16 LINE L1 4790 6190 0 205 301 54 11 chr20 21056871 21056964 -45611041 + L2 LINE L2 329 425 -2889 298 289 58 41 chr20 21057093 21057214 -45610791 + MIR SINE MIR 128 250 -12 238 293 32 49 chr20 21057190 21057313 -45610692 + MIR3 SINE MIR 83 203 -5 * 2386 69 0 0 chr20 21057404 21057708 -45610297 + L1PA8 LINE L1 5867 6170 -2 321 377 42 19 chr20 21059115 21059327 -45608678 + MIR SINE MIR 15 231 -31 527 235 90 30 chr20 21059347 21059513 -45608492 + MER5A DNA MER1_type 14 189 0 229 273 13 0 chr20 21060156 21060233 -45607772 + MER5A DNA MER1_type 9 86 -103 580 97 0 52 chr20 21060911 21061045 -45606960 + (TTCC)n Simple_repeat Simple_repeat 3 129 0 2196 121 7 0 chr20 21062956 21063262 -45604743 - AluSx SINE Alu -4 308 1 1901 151 0 3 chr20 21064190 21064542 -45603463 - AluJb SINE Alu 0 351 1 1765 195 13 81 chr20 21065721 21066168 -45601837 - MER47B DNA MER2_type -1 417 1 1340 66 0 28 chr20 21066748 21066929 -45601076 - L1PA11 LINE L1 -1 6173 5998 1936 143 0 3 chr20 21066935 21067242 -45600763 + L1P LINE L1 4830 5135 -1011 1582 240 99 5 chr20 21067806 21068252 -45599753 + LTR16C LTR ERVL 4 491 0 1464 181 148 13 chr20 21070549 21070852 -45597153 + MER2 DNA MER2_type 1 344 0 209 243 14 0 chr20 21070865 21070935 -45597070 + (TATATG)n Simple_repeat Simple_repeat 4 74 0 225 212 0 106 chr20 21070943 21071009 -45596996 + MER2 DNA MER2_type 287 345 0 180 77 0 0 chr20 21071017 21071043 -45596962 + (TA)n Simple_repeat Simple_repeat 1 26 0 435 203 28 70 chr20 21071046 21071189 -45596816 - L1MC4 LINE L1 -138 7904 7768 945 238 220 34 chr20 21071802 21072272 -45595733 - L1MC4 LINE L1 -432 7610 7018 674 24 0 12 chr20 21072272 21072357 -45595648 + (TTCC)n Simple_repeat Simple_repeat 3 86 0 945 238 220 34 chr20 21072357 21072444 -45595561 - L1MC4 LINE L1 -1024 7018 6949 2848 19 0 0 chr20 21072852 21073163 -45594842 + AluY SINE Alu 1 311 0 22 35 0 0 chr20 21073392 21073421 -45594584 + AT_rich Low_complexity Low_complexity 1 29 0 233 344 48 0 chr20 21073875 21074000 -45594005 + MIR SINE MIR 123 253 -9 1513 180 53 7 chr20 21075073 21075192 -45592813 + AluJo SINE Alu 1 113 -199 264 30 0 0 chr20 21075192 21075225 -45592780 + (TAA)n Simple_repeat Simple_repeat 2 34 0 1513 180 53 7 chr20 21075225 21075389 -45592616 + AluJo SINE Alu 113 297 -15 420 111 0 157 chr20 21075544 21075652 -45592353 - MER46B DNA MER2_type 0 236 146 253 130 0 0 chr20 21075671 21075717 -45592288 + LTR66 LTR ERVL 394 439 -171 * 1547 139 43 18 chr20 21075697 21075723 -45592282 - MER46B DNA MER2_type -2569 162 138 420 20 0 0 chr20 21075723 21075772 -45592233 + (GA)n Simple_repeat Simple_repeat 2 50 0 1547 139 43 18 chr20 21075772 21076025 -45591980 - MER46B DNA MER2_type -2593 138 1 343 267 97 12 chr20 21076080 21076245 -45591760 - LTR33 LTR ERVL -9 512 334 463 279 101 4 chr20 21076292 21076464 -45591541 - LTR33 LTR ERVL -305 216 3 1594 171 4 21 chr20 21076495 21076775 -45591230 - AluJb SINE Alu -2 310 36 24 53 0 0 chr20 21076962 21077000 -45591005 + AT_rich Low_complexity Low_complexity 1 38 0 1351 277 146 38 chr20 21077717 21079181 -45588824 - L2 LINE L2 -1 3312 1681 2167 244 124 41 chr20 21080379 21081275 -45586730 + L1MC4 LINE L1 6941 7910 -132 335 146 10 31 chr20 21081294 21081390 -45586615 + (TAGA)n Simple_repeat Simple_repeat 3 96 0 452 262 7 7 chr20 21081400 21081541 -45586464 + L1MC4 LINE L1 7892 8032 -10 684 308 101 15 chr20 21081647 21082207 -45585798 - L2 LINE L2 -72 3241 2631 396 55 0 0 chr20 21083550 21083605 -45584400 + (TG)n Simple_repeat Simple_repeat 1 55 0 381 170 28 38 chr20 21083868 21083974 -45584031 + L1MB8 LINE L1 6074 6178 0 529 298 98 20 chr20 21083996 21084291 -45583714 - MARNA DNA Mariner -8 578 261 611 323 25 29 chr20 21084576 21084855 -45583150 - LTR16C LTR ERVL -126 365 88 584 209 190 12 chr20 21084935 21085098 -45582907 + MER3 DNA MER1_type 15 206 -3 357 280 9 19 chr20 21085815 21085922 -45582083 - MER117 DNA MER1_type -35 162 57 714 205 88 41 chr20 21086136 21086307 -45581698 + MER58A DNA MER1_type 46 224 0 1988 109 51 3 chr20 21086316 21086610 -45581395 - AluSx SINE Alu -4 308 1 2335 88 3 0 chr20 21087090 21087421 -45580584 + AluSp SINE Alu 1 332 0 657 232 119 54 chr20 21087561 21087998 -45580007 - MLT1H LTR MaLR -2 547 29 369 289 111 31 chr20 21088555 21088780 -45579225 + MIR SINE MIR 18 260 -2 2329 184 24 15 chr20 21089983 21090446 -45577559 + MLT1C LTR MaLR 1 467 0 413 246 44 9 chr20 21090993 21091107 -45576898 - MER5B DNA MER1_type -27 151 34 379 285 15 10 chr20 21091201 21091345 -45576660 + MER5A DNA MER1_type 31 184 -5 290 256 29 51 chr20 21092404 21092541 -45575464 + L1ME4a LINE L1 5774 5907 -214 2502 71 3 3 chr20 21092717 21093025 -45574980 + AluY SINE Alu 2 309 -2 616 227 79 35 chr20 21093201 21093404 -45574601 + MIR SINE MIR 36 247 -15 225 300 30 30 chr20 21093643 21093743 -45574262 - L2 LINE L2 -424 2890 2791 1192 282 22 47 chr20 21094333 21094737 -45573268 - LTR16C LTR ERVL -1 490 97 2145 247 131 3 chr20 21094809 21095474 -45572531 + L1ME1 LINE L1 4038 4787 -1359 3888 70 21 2 chr20 21095477 21096005 -45572000 + L1PB1 LINE L1 5254 5791 -360 695 131 0 61 chr20 21096007 21096372 -45571633 + (TA)n Simple_repeat Simple_repeat 1 342 0 2519 61 5 84 chr20 21096380 21096774 -45571231 + L1PB1 LINE L1 5787 6149 -2 3161 163 40 11 chr20 21096876 21097475 -45570530 + L1MC2 LINE L1 5723 7781 -4 284 332 73 27 chr20 21097659 21097879 -45570126 + MIR SINE MIR 4 233 -29 334 239 0 0 chr20 21098337 21098404 -45569601 - MER3 DNA MER1_type -140 69 3 1114 289 110 33 chr20 21099276 21099730 -45568275 + LTR16C LTR ERVL 1 489 -2 225 308 26 0 chr20 21100253 21100331 -45567674 + CT-rich Low_complexity Low_complexity 3 82 0 683 236 73 94 chr20 21101865 21102331 -45565674 - LTR16A1 LTR ERVL 0 457 2 382 294 76 15 chr20 21102359 21102556 -45565449 - MIR SINE MIR -6 256 48 1657 152 5 127 chr20 21102755 21103149 -45564856 + MER7A DNA MER2_type 3 346 0 207 320 130 0 chr20 21103436 21103536 -45564469 - L2 LINE L2 -9 3304 3192 1926 231 68 2 chr20 21103635 21104107 -45563898 + L1ME1 LINE L1 5369 5871 -295 609 238 41 26 chr20 21104136 21104447 -45563558 + L1ME1 LINE L1 5798 6184 0 198 271 0 0 chr20 21104447 21104495 -45563510 + MIR SINE MIR 207 254 -8 405 58 0 0 chr20 21104510 21104562 -45563443 + (TG)n Simple_repeat Simple_repeat 1 52 0 876 195 18 59 chr20 21104564 21104785 -45563220 + L1ME LINE L1 5369 5580 -586 1217 229 30 52 chr20 21105604 21105970 -45562035 - Charlie4a DNA MER1_type -150 358 1 262 233 0 35 chr20 21106063 21106149 -45561856 - L1MC5 LINE L1 -33 7928 7846 1172 296 66 18 chr20 21106331 21106780 -45561225 - L1ME3A LINE L1 -226 5944 5465 225 0 0 0 chr20 21106780 21106805 -45561200 + (TAA)n Simple_repeat Simple_repeat 1 25 0 1172 296 66 18 chr20 21106805 21106869 -45561136 - L1ME3A LINE L1 -705 5465 5406 1719 204 143 9 chr20 21106891 21107318 -45560687 + MLT1D LTR MaLR 22 505 0 248 262 116 12 chr20 21107404 21107576 -45560429 - L1ME3A LINE L1 -846 5300 5111 184 228 120 54 chr20 21108376 21108468 -45559537 + MIR3 SINE MIR 85 182 -26 3002 194 32 15 chr20 21108552 21109151 -45558854 - L1MB5 LINE L1 -14 6160 5552 668 270 74 6 chr20 21109721 21109990 -45558015 - LTR16C LTR ERVL -60 431 89 2538 54 0 3 chr20 21110756 21111054 -45556951 - AluY SINE Alu -14 297 1 418 280 40 33 chr20 21111396 21111573 -45556432 + L1ME2 LINE L1 5982 6153 -11 368 295 84 44 chr20 21112237 21112464 -45555541 + MIR SINE MIR 18 253 -9 212 296 63 63 chr20 21112535 21112677 -45555328 - MIR3 SINE MIR -64 144 3 1908 166 3 0 chr20 21114386 21114682 -45553323 - AluJo SINE Alu -15 297 1 835 166 26 57 chr20 21115140 21115333 -45552672 + MER5A DNA MER1_type 1 187 -2 949 178 28 47 chr20 21116912 21117125 -45550880 + MER3 DNA MER1_type 1 209 0 198 118 0 0 chr20 21118013 21118047 -45549958 + (TG)n Simple_repeat Simple_repeat 2 35 0 3139 204 98 31 chr20 21118741 21119556 -45548449 + L1MC4a LINE L1 6842 7711 -97 488 228 18 0 chr20 21119596 21119710 -45548295 + L1MC4 LINE L1 7757 7872 -170 812 183 0 8 chr20 21119769 21119895 -45548110 - FLAM_C SINE Alu -18 125 1 512 244 17 0 chr20 21119895 21120010 -45547995 + L1ME2 LINE L1 6039 6155 -9 332 211 37 41 chr20 21120954 21121159 -45546846 - LTR16C LTR ERVL 0 491 215 1598 178 150 89 chr20 21121705 21122131 -45545874 - LTR47A LTR ERVL 0 452 1 294 319 98 29 chr20 21124503 21124707 -45543298 - MIR SINE MIR -29 233 16 1235 290 44 5 chr20 21124720 21125106 -45542899 + LTR16C LTR ERVL 86 486 -5 23 54 0 0 chr20 21126138 21126175 -45541830 + AT_rich Low_complexity Low_complexity 1 37 0 532 284 36 5 chr20 21127233 21127591 -45540414 + L1ME2 LINE L1 5756 6155 -9 851 248 56 9 chr20 21127775 21127989 -45540016 + MER58A DNA MER1_type 1 224 0 23 0 0 0 chr20 21128210 21128233 -45539772 + AT_rich Low_complexity Low_complexity 1 23 0 217 275 38 61 chr20 21129124 21129255 -45538750 - L2 LINE L2 0 3313 3186 457 253 20 47 chr20 21129861 21130011 -45537994 - L2 LINE L2 0 3313 3168 184 333 85 82 chr20 21130140 21130458 -45537547 - L2 LINE L2 -340 2974 2656 976 249 142 30 chr20 21131100 21131473 -45536532 - L2 LINE L2 0 3313 2899 23 0 0 0 chr20 21132326 21132349 -45535656 + AT_rich Low_complexity Low_complexity 1 23 0 1798 150 85 12 chr20 21133562 21133902 -45534103 - MLT1A1 LTR MaLR 0 365 1 14134 202 72 30 chr20 21133950 21135571 -45532434 - L1MA9 LINE L1 0 7272 5720 1765 158 31 7 chr20 21135571 21135862 -45532143 - AluJo SINE Alu -14 298 1 14134 202 72 30 chr20 21135862 21137883 -45530122 - L1MA9 LINE L1 -1552 5720 3785 1673 112 12 0 chr20 21137883 21138134 -45529871 - L1MA2 LINE L1 0 6304 6051 14134 202 72 30 chr20 21138134 21138357 -45529648 - L1MA9 LINE L1 -3487 3785 3573 1957 81 0 4 chr20 21138357 21138605 -45529400 + AluY SINE Alu 1 247 -64 14134 202 72 30 chr20 21138605 21141016 -45526989 - L1MA9 LINE L1 -3699 3573 1039 735 226 44 0 chr20 21141407 21141588 -45526417 + MER5A DNA MER1_type 1 189 0 228 207 198 52 chr20 21141915 21142031 -45525974 + L2 LINE L2 3171 3303 -10 349 177 0 16 chr20 21143115 21143177 -45524828 + L1MB2 LINE L1 4017 4077 -2069 5408 210 35 12 chr20 21143249 21145290 -45522715 + L1MB2 LINE L1 4081 6171 0 227 192 14 96 chr20 21145305 21145378 -45522627 - L1ME4a LINE L1 -91 6030 5964 344 324 28 47 chr20 21145585 21145838 -45522167 - L2 LINE L2 -211 3061 2814 1259 207 39 0 chr20 21146197 21146510 -45521495 - MER33 DNA MER1_type -10 314 1 273 57 0 0 chr20 21147560 21147595 -45520410 + (T)n Simple_repeat Simple_repeat 1 35 0 2066 215 43 38 chr20 21148131 21148717 -45519288 - L1MEc LINE L1 -1520 4695 4107 3184 226 100 29 chr20 21148723 21149783 -45518222 - L1MEc LINE L1 -2472 3743 2609 * 4209 232 45 16 chr20 21149781 21150882 -45517123 - L1MEc LINE L1 -5222 1174 43 276 267 185 22 chr20 21150883 21151018 -45516987 + MIR SINE MIR 86 242 -20 267 306 12 12 chr20 21151412 21151497 -45516508 - MIR3 SINE MIR -34 174 90 1460 238 65 23 chr20 21151598 21151984 -45516021 + LTR16C LTR ERVL 90 491 0 858 267 0 5 chr20 21152764 21152974 -45515031 + MER3 DNA MER1_type 1 209 0 207 338 58 36 chr20 21152997 21153136 -45514869 + L3 LINE CR1 82 223 -1354 391 191 7 21 chr20 21153244 21153342 -45514663 + LTR54 LTR ERV1 384 477 -21 430 293 63 23 chr20 21153563 21153737 -45514268 - L2 LINE L2 -220 3052 2872 454 187 57 41 chr20 21154083 21154206 -45513799 - L2 LINE L2 0 3313 3189 381 43 0 0 chr20 21156109 21156156 -45511849 + (TG)n Simple_repeat Simple_repeat 1 47 0 182 277 39 115 chr20 21156448 21156578 -45511427 - L2 LINE L2 -76 3196 3077 413 205 112 77 chr20 21158072 21158318 -45509687 - L1ME4a LINE L1 -2 6119 5883 2255 117 0 0 chr20 21158318 21158617 -45509388 - AluSx SINE Alu -13 299 1 413 205 112 77 chr20 21158617 21158733 -45509272 - L1ME4a LINE L1 -238 5883 5602 361 291 119 52 chr20 21158834 21159222 -45508783 - L2 LINE L2 0 3313 2900 377 314 63 0 chr20 21159528 21159703 -45508302 + L1ME4a LINE L1 5721 5906 -215 401 253 67 17 chr20 21159775 21159953 -45508052 + L1ME4a LINE L1 5935 6121 0 340 152 136 0 chr20 21160574 21160640 -45507365 + L2 LINE L2 3219 3293 -20 502 224 12 16 chr20 21162321 21162573 -45505432 + GA-rich Low_complexity Low_complexity 1 250 0 810 297 97 31 chr20 21163735 21164659 -45503346 + L1ME4a LINE L1 5130 6121 0 387 151 41 0 chr20 21165506 21165579 -45502426 + L1MA10 LINE L1 6259 6334 0 382 267 30 22 chr20 21165863 21165998 -45502007 + MIR SINE MIR 4 139 -123 424 302 30 91 chr20 21166008 21166273 -45501732 - MIR SINE MIR 0 262 14 299 267 11 11 chr20 21166337 21166427 -45501578 + LTR67 LTR ERVL 466 555 -2 342 326 75 65 chr20 21166699 21167086 -45500919 - L2 LINE L2 -23 3249 2859 2669 269 58 62 chr20 21167211 21168599 -45499406 + HAL1 LINE L1 2 1384 -1123 31 0 0 0 chr20 21168599 21168630 -45499375 + AT_rich Low_complexity Low_complexity 1 31 0 2111 202 35 79 chr20 21168630 21169250 -45498755 + L1MC5 LINE L1 6709 7301 -660 6515 11 0 0 chr20 21169755 21170474 -45497531 - L1HS LINE L1 0 6155 5437 * 7449 20 0 23 chr20 21170465 21171402 -45496603 + L1P LINE L1 4511 5421 -734 441 289 224 23 chr20 21171460 21171515 -45496490 - LTR16C LTR ERVL -63 428 385 1761 160 47 32 chr20 21171515 21171853 -45496152 - MER61A LTR ERV1 0 343 1 441 289 224 23 chr20 21171853 21172060 -45495945 - LTR16C LTR ERVL -106 385 113 183 313 24 12 chr20 21172119 21172202 -45495803 - MIR SINE MIR -175 87 4 685 198 19 19 chr20 21172482 21172644 -45495361 - MER5B DNA MER1_type 0 178 17 1818 246 163 77 chr20 21174148 21174335 -45493670 - L1MC4 LINE L1 0 8042 7873 1848 95 6 143 chr20 21174335 21174693 -45493312 + AluSg1 SINE Alu 1 309 0 1818 246 163 77 chr20 21174693 21174950 -45493055 - L1MC4 LINE L1 -169 7873 7640 2430 92 0 0 chr20 21174950 21175243 -45492762 + AluSg SINE Alu 1 293 -17 1818 246 163 77 chr20 21175243 21176128 -45491877 - L1MC4 LINE L1 -402 7640 6500 316 283 205 49 chr20 21176137 21176444 -45491561 - L1MC4a LINE L1 -1341 6467 6113 * 714 271 108 5 chr20 21176436 21176650 -45491355 - L1MC4a LINE L1 -2024 5784 5549 183 368 16 8 chr20 21176671 21176796 -45491209 - L2 LINE L2 -639 2675 2550 423 217 0 0 chr20 21176959 21177065 -45490940 + (TG)n Simple_repeat Simple_repeat 1 106 0 315 315 18 9 chr20 21180312 21180423 -45487582 + GA-rich Low_complexity Low_complexity 3 114 0 226 345 0 0 chr20 21180588 21180672 -45487333 + (CA)n Simple_repeat Simple_repeat 1 84 0 198 301 0 0 chr20 21180684 21180807 -45487198 + (CA)n Simple_repeat Simple_repeat 1 123 0 352 267 51 37 chr20 21181140 21181357 -45486648 - LTR16B LTR ERVL -12 452 233 232 91 0 0 chr20 21181386 21181419 -45486586 - LTR16B LTR ERVL -308 156 124 195 264 132 33 chr20 21181786 21181907 -45486098 + L3b LINE CR1 1332 1464 -119 219 78 59 0 chr20 21182185 21182236 -45485769 + (TA)n Simple_repeat Simple_repeat 1 54 0 941 56 87 0 chr20 21182810 21182936 -45485069 - MER85 DNA T2_type -2 137 1 347 137 0 0 chr20 21183590 21183641 -45484364 - MER74B LTR ERVL -34 588 538 791 153 35 7 chr20 21183643 21183787 -45484218 - LTR56 LTR ERV1 -297 148 1 * 1230 197 27 23 chr20 21183787 21184043 -45483962 - MER74A LTR ERVL -301 257 1 332 329 53 7 chr20 21185056 21185208 -45482797 + MIR SINE MIR 9 167 -95 308 318 73 0 chr20 21185987 21186097 -45481908 - MIR SINE MIR 0 262 145 1948 123 70 25 chr20 21187090 21187449 -45480556 + THE1C LTR MaLR 1 375 0 198 0 0 0 chr20 21190573 21190595 -45477410 + (T)n Simple_repeat Simple_repeat 1 22 0 198 370 11 0 chr20 21191121 21191237 -45476768 + MIR SINE MIR 53 135 -73 5779 224 41 66 chr20 21191433 21194798 -45473207 - L1MC2 LINE L1 -8 6336 3067 261 0 0 0 chr20 21194798 21194827 -45473178 + (TTG)n Simple_repeat Simple_repeat 2 30 0 5779 224 41 66 chr20 21194827 21194974 -45473031 - L1MC2 LINE L1 -3277 3067 2918 805 226 77 10 chr20 21195345 21195553 -45472452 - LTR16C LTR ERVL 0 491 270 211 235 15 44 chr20 21195895 21195963 -45472042 - MIR SINE MIR -70 192 127 246 241 0 0 chr20 21196610 21196664 -45471341 + MIR SINE MIR 61 114 -94 242 267 0 0 chr20 21196896 21196956 -45471049 + L3 LINE CR1 655 714 -863 430 283 94 28 chr20 21196985 21197197 -45470808 + MIR SINE MIR 20 245 -17 183 80 0 0 chr20 21197491 21197516 -45470489 + (CAAAA)n Simple_repeat Simple_repeat 5 29 0 222 313 23 31 chr20 21198652 21198780 -45469225 + MIR SINE MIR 123 249 -13 2149 136 0 3 chr20 21200644 21200945 -45467060 + AluSx SINE Alu 1 300 -12 553 209 54 8 chr20 21200962 21201091 -45466914 + L1ME3A LINE L1 6027 6161 -9 412 255 0 10 chr20 21201148 21201250 -45466755 - MER91A DNA MER1_type -88 108 8 441 0 0 0 chr20 21202304 21202353 -45465652 + (TG)n Simple_repeat Simple_repeat 2 50 0 1395 133 9 156 chr20 21202658 21202831 -45465174 + AluJo SINE Alu 1 104 -208 2142 94 4 0 chr20 21202831 21203128 -45464877 + AluSg1 SINE Alu 3 300 0 1395 133 9 156 chr20 21203128 21203291 -45464714 + AluJo SINE Alu 104 289 -23 693 304 82 63 chr20 21204231 21204783 -45463222 + L3 LINE CR1 334 895 -682 294 232 0 0 chr20 21205006 21205062 -45462943 - MLT1L LTR MaLR -407 208 153 733 326 128 11 chr20 21205397 21205756 -45462249 + LTR16C LTR ERVL 89 489 -2 2047 138 19 41 chr20 21206170 21206532 -45461473 + THE1A LTR MaLR 2 355 0 330 355 74 0 chr20 21207170 21207291 -45460714 + MIR3 SINE MIR 42 171 -37 1966 141 90 15 chr20 21208282 21208672 -45459333 - L1MB3 LINE L1 0 6183 5765 434 225 0 0 chr20 21209868 21209957 -45458048 - MER5A DNA MER1_type -80 109 21 495 226 0 131 chr20 21209977 21210176 -45457829 + MER96 DNA MER1_type? 3 175 0 229 273 68 34 chr20 21210496 21210584 -45457421 - MIR SINE MIR -171 91 1 219 114 0 0 chr20 21211276 21211311 -45456694 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 238 241 96 12 chr20 21211314 21211397 -45456608 - L1MC4 LINE L1 -1339 6703 6614 381 272 108 89 chr20 21211399 21211448 -45456557 - MIR SINE MIR -17 245 198 2195 122 0 0 chr20 21211448 21211760 -45456245 - AluSx SINE Alu 0 312 1 381 272 108 89 chr20 21211760 21211923 -45456082 - MIR SINE MIR -64 198 29 399 152 8 149 chr20 21211931 21212066 -45455939 - L1PA15 LINE L1 0 6165 6050 399 250 19 19 chr20 21212075 21212183 -45455822 - MER5A DNA MER1_type 0 189 82 1040 72 78 0 chr20 21212198 21212351 -45455654 - AluY SINE Alu -14 297 133 262 176 15 59 chr20 21212353 21212421 -45455584 - MER5A DNA MER1_type -124 65 1 374 361 143 16 chr20 21212987 21213231 -45454774 - L1ME4a LINE L1 -227 5894 5620 195 250 0 0 chr20 21214291 21214343 -45453662 + (CA)n Simple_repeat Simple_repeat 1 52 0 206 253 0 0 chr20 21214686 21214742 -45453263 - MIR SINE MIR -114 148 94 1027 224 5 10 chr20 21214852 21215057 -45452948 + MER3 DNA MER1_type 1 204 -5 287 164 0 36 chr20 21215020 21215075 -45452930 - MER3 DNA MER1_type -120 89 37 * 23 0 0 0 chr20 21215307 21215330 -45452675 + AT_rich Low_complexity Low_complexity 1 23 0 537 259 47 29 chr20 21215728 21215898 -45452107 + MER5B DNA MER1_type 3 175 -3 421 250 107 36 chr20 21216791 21216987 -45451018 - L2 LINE L2 0 3313 3104 2395 296 188 34 chr20 21216997 21217526 -45450479 - L2 LINE L2 -576 2738 2292 2124 117 0 0 chr20 21217526 21217824 -45450181 + AluSx SINE Alu 1 298 -14 2395 296 188 34 chr20 21217824 21219256 -45448749 - L2 LINE L2 -1022 2292 474 348 347 71 6 chr20 21219496 21219666 -45448339 + MIR3 SINE MIR 22 202 -6 239 293 0 0 chr20 21220492 21220550 -45447455 + (CA)n Simple_repeat Simple_repeat 1 58 0 255 321 69 61 chr20 21223448 21223579 -45444426 - MIR SINE MIR -110 152 21 281 306 41 16 chr20 21224352 21224473 -45443532 + L1MC4a LINE L1 3742 3865 -2281 1627 165 53 28 chr20 21224544 21224865 -45443140 - L1MA7 LINE L1 -25 6266 5938 2325 70 0 3 chr20 21224984 21225282 -45442723 + AluY SINE Alu 1 297 -14 496 339 66 18 chr20 21225353 21225627 -45442378 + L1MC4a LINE L1 4177 4463 -1683 1195 224 18 4 chr20 21226299 21226580 -45441425 + L1MC4a LINE L1 5003 5287 -859 212 306 82 20 chr20 21228742 21228840 -45439165 + L2 LINE L2 3168 3271 -1 935 231 137 19 chr20 21229401 21229708 -45438297 - LTR16C LTR ERVL 0 491 149 261 335 68 6 chr20 21229876 21230037 -45437968 + MIR SINE MIR 90 260 -2 266 277 117 36 chr20 21230123 21230260 -45437745 + MIR3 SINE MIR 16 163 -45 218 287 69 23 chr20 21231012 21231099 -45436906 - L2 LINE L2 -45 3227 3137 498 296 151 15 chr20 21231196 21231402 -45436603 - MIR SINE MIR 0 262 29 262 340 21 43 chr20 21231761 21231902 -45436103 + L2 LINE L2 2252 2389 -925 295 296 133 48 chr20 21231910 21232309 -45435696 + L2 LINE L2 2545 2977 -337 294 282 13 0 chr20 21232487 21232565 -45435440 + L2 LINE L2 3235 3313 0 2787 178 31 28 chr20 21233860 21234049 -45433956 + L1MB2 LINE L1 5593 5780 -391 2267 143 8 0 chr20 21234049 21234405 -45433600 - MER46B DNA MER2_type -2 234 1 2787 178 31 28 chr20 21234405 21234789 -45433216 + L1MB2 LINE L1 5780 6168 -3 768 301 92 29 chr20 21234842 21235361 -45432644 + L1MC4a LINE L1 5384 5935 -1873 384 245 8 32 chr20 21236252 21236379 -45431626 + L1ME1 LINE L1 6033 6156 -22 279 329 185 14 chr20 21236888 21237034 -45430971 + MIR SINE MIR 14 184 -78 1646 133 42 9 chr20 21238568 21238913 -45429092 - Tigger4(Zombi) DNA MER2_type 0 2731 1 348 274 98 20 chr20 21241644 21241848 -45426157 - LTR16C LTR ERVL -79 412 193 503 364 32 8 chr20 21242167 21242420 -45425585 + MIR SINE MIR 2 260 -2 24 0 0 0 chr20 21242687 21242711 -45425294 + AT_rich Low_complexity Low_complexity 1 24 0 918 254 163 10 chr20 21244798 21245191 -45422814 - LTR16A1 LTR ERVL 0 457 5 287 328 46 6 chr20 21246505 21246679 -45421326 - LTR16C LTR ERVL -4 487 307 3779 124 8 2 chr20 21247792 21248316 -45419689 + MER1A DNA MER1_type 1 527 -2 845 245 115 68 chr20 21248602 21249166 -45418839 + MLT1H1 LTR MaLR 2 546 -9 710 224 45 45 chr20 21249177 21249400 -45418605 - MLT1A1 LTR MaLR 0 365 143 383 252 39 4 chr20 21249393 21249514 -45418491 - FLAM_A SINE Alu -11 122 1 * 733 147 124 8 chr20 21249519 21249648 -45418357 - MLT1A1 LTR MaLR -217 148 5 289 137 20 59 chr20 21249693 21249795 -45418210 + (CATA)n Simple_repeat Simple_repeat 2 99 0 627 284 53 47 chr20 21251954 21252334 -45415671 + L1ME LINE L1 112 493 -5577 326 245 32 0 chr20 21252565 21252659 -45415346 + L1ME LINE L1 531 627 -5443 1628 158 44 30 chr20 21252676 21252974 -45415031 + AluJo SINE Alu 1 302 -10 21 36 0 0 chr20 21254327 21254355 -45413650 + AT_rich Low_complexity Low_complexity 1 28 0 1279 258 69 36 chr20 21255388 21255780 -45412225 - LTR16C LTR ERVL -2 489 85 516 303 11 32 chr20 21255919 21256104 -45411901 - MIR SINE MIR -46 216 36 455 268 54 36 chr20 21256425 21256593 -45411412 + MIR SINE MIR 37 207 -55 287 320 62 8 chr20 21257083 21257211 -45410794 - L2 LINE L2 -1 3271 3137 782 278 60 47 chr20 21257300 21257685 -45410320 - MLT1I LTR MaLR -17 392 3 219 278 70 61 chr20 21259001 21259116 -45408889 - MIR SINE MIR -30 232 117 303 239 71 80 chr20 21259740 21259853 -45408152 - MIR SINE MIR -65 143 32 1505 229 30 30 chr20 21260424 21260791 -45407214 + MLT1A2 LTR MaLR 1 367 -7 562 274 30 20 chr20 21260837 21261190 -45406815 + LTR16C LTR ERVL 87 491 0 2501 47 0 0 chr20 21261256 21261554 -45406451 - AluY SINE Alu -13 298 1 248 273 30 30 chr20 21262501 21262600 -45405405 + MIR SINE MIR 34 132 -130 436 321 109 0 chr20 21263212 21263405 -45404600 + MIR SINE MIR 48 261 -1 1008 180 47 13 chr20 21263678 21263823 -45404182 - L1MA9 LINE L1 -7 6305 6148 192 40 0 0 chr20 21263823 21263848 -45404157 + (TG)n Simple_repeat Simple_repeat 2 26 0 1008 180 47 13 chr20 21263848 21263935 -45404070 - L1MA9 LINE L1 -164 6148 6065 528 270 25 34 chr20 21264105 21264309 -45403696 + LTR16C LTR ERVL 290 491 0 291 316 36 7 chr20 21264307 21264446 -45403559 + MER117 DNA MER1_type 1 143 -54 * 1341 244 100 30 chr20 21264891 21265351 -45402654 - Charlie4a DNA MER1_type 0 508 17 585 262 198 8 chr20 21265772 21266024 -45401981 + L2 LINE L2 3014 3313 0 186 300 0 0 chr20 21266035 21266085 -45401920 + L2 LINE L2 3211 3260 -12 752 253 207 15 chr20 21266319 21266756 -45401249 - MLT1G LTR MaLR -2 588 46 244 304 0 45 chr20 21266766 21266878 -45401127 + MIR3 SINE MIR 7 113 -95 296 247 43 32 chr20 21268738 21268831 -45399174 - MER115 DNA AcHobo -446 247 154 207 139 0 0 chr20 21271044 21271080 -45396925 + (TCCC)n Simple_repeat Simple_repeat 1 36 0 709 136 106 8 chr20 21271962 21272094 -45395911 + MER3 DNA MER1_type 41 185 -24 831 154 96 0 chr20 21272718 21272906 -45395099 - L1MA7 LINE L1 0 6291 6086 1164 168 51 19 chr20 21272911 21273167 -45394838 + L1 LINE L1 4180 4443 -1703 520 316 92 14 chr20 21273537 21273755 -45394250 + MIR SINE MIR 5 239 -23 881 318 85 8 chr20 21273803 21274181 -45393824 + LTR16C LTR ERVL 68 474 -17 24 32 0 0 chr20 21274599 21274630 -45393375 + AT_rich Low_complexity Low_complexity 1 31 0 670 275 86 28 chr20 21275245 21275569 -45392436 - LTR16C LTR ERVL 0 491 149 360 298 240 0 chr20 21276218 21276389 -45391616 + MIR SINE MIR 50 261 -1 682 295 47 54 chr20 21276598 21276856 -45391149 + MIR SINE MIR 6 261 -1 375 301 49 87 chr20 21277042 21277308 -45390697 + L2 LINE L2 3016 3271 -1 21 0 0 0 chr20 21277742 21277763 -45390242 + AT_rich Low_complexity Low_complexity 1 21 0 232 194 0 60 chr20 21279086 21279153 -45388852 + L1MC4 LINE L1 6644 6706 -1336 322 306 117 15 chr20 21279248 21279454 -45388551 + L2 LINE L2 2367 2593 -721 23 0 0 0 chr20 21280005 21280028 -45387977 + AT_rich Low_complexity Low_complexity 1 23 0 330 297 22 0 chr20 21280417 21280508 -45387497 + MIR SINE MIR 54 146 -62 189 245 94 0 chr20 21281471 21281524 -45386481 - MIR SINE MIR -116 146 89 289 226 16 0 chr20 21281779 21281841 -45386164 - MIR SINE MIR -107 155 93 600 264 29 0 chr20 21281841 21281981 -45386024 - MIR SINE MIR -91 171 28 587 241 90 33 chr20 21282962 21283419 -45384586 - MLT1F LTR MaLR -2 593 1 358 285 74 55 chr20 21283453 21283780 -45384225 - L2 LINE L2 -282 2990 2654 189 0 0 0 chr20 21284337 21284358 -45383647 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 1849 124 22 7 chr20 21284358 21284632 -45383373 - AluSg SINE Alu -32 278 1 260 282 127 7 chr20 21284844 21284986 -45383019 + MER103 DNA DNA 8 166 0 1513 246 52 12 chr20 21285101 21285507 -45382498 - MLT1H LTR MaLR 0 549 128 1533 182 176 9 chr20 21285697 21286032 -45381973 - MSTD LTR MaLR 0 396 6 237 243 140 65 chr20 21286152 21286366 -45381639 - MER90 LTR ERV1 -4 610 381 7762 25 1 1 chr20 21286366 21287965 -45380040 + L1PA4 LINE L1 4554 6152 -3 2494 235 77 47 chr20 21288292 21289150 -45378855 + L1ME3A LINE L1 5239 6131 -39 2958 161 163 5 chr20 21289528 21290137 -45377868 - MER39 LTR ERV1 -2 705 1 183 284 11 91 chr20 21290137 21290225 -45377780 - MIR SINE MIR -105 103 23 225 204 37 19 chr20 21291507 21291561 -45376444 - L3b LINE CR1 -3 1580 1526 433 308 33 16 chr20 21292821 21293003 -45375002 + MIR SINE MIR 78 262 0 229 284 34 128 chr20 21293017 21293165 -45374840 - MIR SINE MIR -70 192 59 261 344 94 16 chr20 21293369 21293497 -45374508 - L2 LINE L2 -3 3269 3132 1001 301 29 29 chr20 21293765 21294177 -45373828 + MARNA DNA Mariner 11 422 -164 2510 68 0 0 chr20 21295805 21296116 -45371889 + AluY SINE Alu 1 311 0 209 288 34 0 chr20 21296554 21296613 -45371392 + L3 LINE CR1 1513 1573 -4 296 192 96 0 chr20 21296708 21296781 -45371224 + LTR16A1 LTR ERVL 216 295 -162 306 294 23 130 chr20 21296891 21297153 -45370852 + L2 LINE L2 2992 3225 -47 1117 258 22 6 chr20 21297159 21297477 -45370528 + L1ME1 LINE L1 5839 6161 -5 826 153 118 0 chr20 21298393 21298537 -45369468 - MLT1E3 LTR MaLR 0 624 464 * 1126 232 85 0 chr20 21298533 21298792 -45369213 - MLT1E3 LTR MaLR -343 281 1 * 1148 272 33 39 chr20 21298792 21299153 -45368852 - MLT1J1 LTR MaLR -38 408 50 339 309 63 57 chr20 21299343 21299429 -45368576 + MARNA DNA Mariner 241 325 -261 2057 138 0 0 chr20 21299429 21299741 -45368264 + AluSx SINE Alu 1 312 0 339 309 63 57 chr20 21299741 21299987 -45368018 + MARNA DNA Mariner 325 575 -11 183 204 0 0 chr20 21300466 21300515 -45367490 + (TG)n Simple_repeat Simple_repeat 2 50 0 853 270 59 22 chr20 21301127 21301397 -45366608 - L2 LINE L2 -2378 936 657 184 203 186 34 chr20 21302344 21302403 -45365602 + L2 LINE L2 523 590 -2724 662 136 8 0 chr20 21302924 21303042 -45364963 + CT-rich Low_complexity Low_complexity 2 120 0 299 356 0 0 chr20 21303109 21303227 -45364778 + (TG)n Simple_repeat Simple_repeat 1 118 0 760 238 55 42 chr20 21304010 21304321 -45363684 + MER33 DNA MER1_type 6 320 -4 395 348 24 18 chr20 21304420 21304584 -45363421 + MIR SINE MIR 71 235 -27 2239 137 14 14 chr20 21305802 21306167 -45361838 - MLT1A1 LTR MaLR 0 365 1 186 43 0 0 chr20 21306504 21306527 -45361478 + (A)n Simple_repeat Simple_repeat 1 23 0 802 249 83 0 chr20 21307206 21307399 -45360606 - MER63A DNA MER1_type 0 210 2 198 143 0 0 chr20 21307904 21307939 -45360066 + (TGGA)n Simple_repeat Simple_repeat 4 38 0 461 100 0 0 chr20 21308161 21308231 -45359774 - AluSx SINE Alu -4 307 238 2490 219 55 52 chr20 21308235 21309532 -45358473 - L1ME1 LINE L1 -12 6347 5039 554 204 21 49 chr20 21309801 21309943 -45358062 + MER63 DNA MER1_type 1 764 -298 617 300 25 50 chr20 21310022 21310339 -45357666 - LTR16C LTR ERVL -49 442 134 591 262 154 27 chr20 21311592 21311813 -45356192 - MIR SINE MIR 0 262 14 403 237 13 0 chr20 21314284 21314440 -45353565 + (CAT)n Simple_repeat Simple_repeat 1 158 0 1511 126 17 0 chr20 21314801 21315032 -45352973 - AluSx SINE Alu -77 235 1 414 299 177 7 chr20 21315348 21315580 -45352425 + LTR16A1 LTR ERVL 177 490 -1 383 344 65 23 chr20 21315741 21315956 -45352049 + MIR SINE MIR 15 238 -24 237 65 0 0 chr20 21315956 21315987 -45352018 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 199 261 22 0 chr20 21316000 21316046 -45351959 - L2 LINE L2 -39 3274 3228 195 250 66 26 chr20 21316059 21316135 -45351870 - L2 LINE L2 -367 2905 2827 411 284 29 0 chr20 21316155 21316257 -45351748 + Charlie8 DNA MER1_type 96 200 -2217 4701 116 49 40 chr20 21316799 21317600 -45350405 + L1PA15 LINE L1 5357 6164 -1 4824 168 47 4 chr20 21317697 21318706 -45349299 + L1MB3 LINE L1 5126 6180 -3 787 283 94 60 chr20 21319416 21319914 -45348091 + LTR33 LTR ERVL 7 521 0 1985 142 152 8 chr20 21319937 21320311 -45347694 - MSTA LTR MaLR 0 428 1 324 290 40 16 chr20 21320384 21320508 -45347497 + MER5A DNA MER1_type 41 167 -22 1240 221 37 0 chr20 21320512 21320811 -45347194 - Charlie4a DNA MER1_type -169 339 30 207 0 0 0 chr20 21320971 21320994 -45347011 + (GTGTG)n Simple_repeat Simple_repeat 3 25 0 367 233 70 0 chr20 21321019 21321105 -45346900 + MIR SINE MIR 47 138 -124 215 241 0 35 chr20 21321370 21321428 -45346577 + GA-rich Low_complexity Low_complexity 5 60 0 862 256 159 75 chr20 21321837 21321982 -45346023 - LTR16C LTR ERVL 0 491 360 1466 187 3 32 chr20 21321982 21322297 -45345708 + AluJo SINE Alu 1 306 -6 862 256 159 75 chr20 21322297 21322604 -45345401 - LTR16C LTR ERVL -131 360 1 23 33 0 0 chr20 21322807 21322837 -45345168 + AT_rich Low_complexity Low_complexity 1 30 0 502 285 158 26 chr20 21323408 21323846 -45344159 - MLT1L LTR MaLR -3 611 1 536 248 159 39 chr20 21324316 21324574 -45343431 - MLT1H LTR MaLR -13 536 248 258 281 104 73 chr20 21324615 21324779 -45343226 - MIR SINE MIR -40 222 54 1657 164 7 23 chr20 21324895 21325205 -45342800 + AluJb SINE Alu 1 305 -7 400 297 83 22 chr20 21325913 21326129 -45341876 + MIR SINE MIR 31 262 0 2221 84 0 3 chr20 21326982 21327279 -45340726 - AluY SINE Alu -12 299 4 398 329 66 9 chr20 21327656 21327884 -45340121 - L1MC4a LINE L1 -1923 5885 5645 303 261 100 15 chr20 21328065 21328195 -45339810 - MLT1K LTR MaLR -22 566 426 275 234 0 11 chr20 21328195 21328289 -45339716 + (TG)n Simple_repeat Simple_repeat 1 93 0 288 240 73 42 chr20 21328289 21328385 -45339620 - MLT1K LTR MaLR -160 428 330 362 299 91 18 chr20 21328937 21329158 -45338847 - MLT1L LTR MaLR -369 246 10 931 250 198 17 chr20 21329352 21329813 -45338192 - L2 LINE L2 0 3313 2770 25 0 0 0 chr20 21330676 21330701 -45337304 + AT_rich Low_complexity Low_complexity 1 25 0 511 135 0 103 chr20 21330828 21330954 -45337051 - MER5A DNA MER1_type -74 115 3 501 303 85 18 chr20 21331577 21331742 -45336263 - MIR SINE MIR -74 188 13 180 265 0 0 chr20 21332530 21332579 -45335426 + MIR SINE MIR 96 144 -64 377 200 13 0 chr20 21334381 21334456 -45333549 + Charlie8 DNA MER1_type 95 170 -2247 691 278 57 14 chr20 21337579 21337788 -45330217 + MIR SINE MIR 20 237 -25 1544 247 62 14 chr20 21339020 21339441 -45328564 - LTR16C LTR ERVL -8 483 43 247 362 73 26 chr20 21339629 21339861 -45328144 - MIR SINE MIR 0 262 20 686 38 0 0 chr20 21340033 21340113 -45327892 - MADE1 DNA Mariner 0 80 1 432 259 85 95 chr20 21341233 21341662 -45326343 - MLT1K LTR MaLR -16 572 134 1524 206 57 33 chr20 21341856 21342252 -45325753 - L1ME LINE L1 -483 5683 5283 2141 126 0 0 chr20 21342713 21343023 -45324982 - AluSx SINE Alu -2 310 1 461 277 119 17 chr20 21343379 21343556 -45324449 - MIR SINE MIR -2 260 66 436 226 0 0 chr20 21344459 21344543 -45323462 - L2 LINE L2 0 3313 3230 234 208 0 0 chr20 21344598 21344651 -45323354 + (TGGG)n Simple_repeat Simple_repeat 2 54 0 263 277 36 45 chr20 21344715 21344827 -45323178 - L2 LINE L2 -166 3147 3037 271 323 43 11 chr20 21345170 21345263 -45322742 + L2 LINE L2 3150 3245 -27 939 310 121 26 chr20 21345565 21346319 -45321686 - L2 LINE L2 -56 3257 2435 32 20 0 20 chr20 21346994 21347029 -45320976 + AT_rich Low_complexity Low_complexity 1 36 -13 1537 178 13 29 chr20 21347029 21347344 -45320661 + AluJo SINE Alu 2 311 -1 32 20 0 20 chr20 21347344 21347358 -45320647 + AT_rich Low_complexity Low_complexity 36 49 0 3870 128 23 3 chr20 21347372 21347988 -45320017 - L1MA4A LINE L1 -14 6289 5662 28 0 0 0 chr20 21348799 21348827 -45319178 + AT_rich Low_complexity Low_complexity 1 28 0 231 36 0 0 chr20 21348833 21348861 -45319144 + (CA)n Simple_repeat Simple_repeat 2 29 0 24 0 0 0 chr20 21348882 21348906 -45319099 + AT_rich Low_complexity Low_complexity 1 24 0 725 277 20 15 chr20 21348960 21349155 -45318850 - MIR SINE MIR -57 205 10 1656 180 0 7 chr20 21350599 21350888 -45317117 - AluJo SINE Alu -25 287 1 775 289 5 0 chr20 21350907 21351094 -45316911 + MIR SINE MIR 29 216 -46 2219 88 0 3 chr20 21351818 21352113 -45315892 + AluSq SINE Alu 1 294 -19 404 313 60 0 chr20 21352138 21352272 -45315733 - MIR SINE MIR -8 254 113 192 221 47 81 chr20 21352457 21352543 -45315462 - MIR SINE MIR -174 88 6 650 291 70 48 chr20 21353971 21354384 -45313621 - L2 LINE L2 -25 3288 2867 332 331 26 13 chr20 21356653 21356804 -45311201 - MIR3 SINE MIR -15 193 41 281 297 60 115 chr20 21357793 21358062 -45309943 + L2 LINE L2 2813 3066 -206 1728 57 18 9 chr20 21359330 21359559 -45308446 - L1PA8 LINE L1 -2 6170 5940 331 267 17 17 chr20 21360036 21360152 -45307853 + CT-rich Low_complexity Low_complexity 2 117 0 1481 296 59 2 chr20 21360456 21360915 -45307090 - LTR16C LTR ERVL -6 485 1 249 309 0 15 chr20 21361596 21361664 -45306341 - L3 LINE CR1 -13 1564 1498 688 273 210 69 chr20 21361670 21362226 -45305779 + L2 LINE L2 1829 2305 -1008 1419 174 4 25 chr20 21362226 21362501 -45305504 + L1MA5 LINE L1 6032 6300 0 688 273 210 69 chr20 21362501 21362535 -45305470 + L2 LINE L2 2305 2333 -980 306 0 0 0 chr20 21362535 21362569 -45305436 + (TG)n Simple_repeat Simple_repeat 2 35 0 688 273 210 69 chr20 21362569 21363246 -45304759 + L2 LINE L2 2333 3268 -45 456 330 176 27 chr20 21363281 21363987 -45304018 - L3 LINE CR1 -85 1492 682 863 279 8 20 chr20 21364054 21364305 -45303700 + MIR SINE MIR 14 261 -1 248 205 18 0 chr20 21365165 21365230 -45302775 - LTR16B LTR ERVL 0 452 385 2421 138 3 0 chr20 21365239 21365593 -45302412 - MSTA LTR MaLR 0 428 74 1548 173 36 53 chr20 21365575 21365990 -45302015 + MLT2B3 LTR ERVL 153 554 0 * 489 310 134 21 chr20 21365990 21366317 -45301688 - LTR16A LTR ERVL -85 365 2 232 229 0 0 chr20 21366920 21366968 -45301037 - L2 LINE L2 -72 3241 3194 524 237 12 64 chr20 21368114 21368154 -45299851 + MIR SINE MIR 36 77 -185 2266 139 18 18 chr20 21368154 21368542 -45299463 - MLT1B LTR MaLR -2 388 1 524 237 12 64 chr20 21368542 21368674 -45299331 + MIR SINE MIR 77 199 -63 631 279 155 62 chr20 21368988 21369518 -45298487 + MLT1G LTR MaLR 12 590 0 300 274 153 45 chr20 21371523 21371680 -45296325 - MER5A DNA MER1_type 0 189 16 2361 160 54 5 chr20 21372630 21373036 -45294969 - MSTB LTR MaLR 0 426 1 1039 174 31 5 chr20 21373454 21373650 -45294355 - MER3 DNA MER1_type -4 205 5 276 219 8 84 chr20 21374321 21374440 -45293565 - MLT1H LTR MaLR 0 542 433 507 307 30 15 chr20 21374455 21374657 -45293348 - MLT1H LTR MaLR -292 257 53 767 247 95 19 chr20 21374770 21375169 -45292836 - MLT1H LTR MaLR -2 547 26 25 0 0 0 chr20 21375997 21376022 -45291983 + AT_rich Low_complexity Low_complexity 1 25 0 201 263 0 0 chr20 21376177 21376234 -45291771 - MIR SINE MIR -109 153 97 2317 92 0 25 chr20 21377843 21378160 -45289845 + AluSc SINE Alu 1 309 0 522 276 30 20 chr20 21378230 21378450 -45289555 + L1M3d LINE L1 -719 565 -5738 344 348 11 45 chr20 21378438 21378616 -45289389 + L1M3d LINE L1 922 1093 -5210 * 3287 234 29 47 chr20 21378751 21379989 -45288016 + L1M3d LINE L1 794 1896 -4488 1494 148 54 64 chr20 21380993 21381291 -45286714 + AluJb SINE Alu 5 299 -13 549 214 0 0 chr20 21381390 21381488 -45286517 - Tigger5 DNA MER2_type -1 2322 2225 * 1207 194 33 0 chr20 21381484 21381695 -45286310 - Tigger5 DNA MER2_type -2104 219 2 336 94 0 0 chr20 21381702 21381755 -45286250 + (TG)n Simple_repeat Simple_repeat 2 54 0 288 281 39 59 chr20 21381794 21381947 -45286058 + MIR SINE MIR 40 189 -73 2045 187 105 7 chr20 21382150 21382577 -45285428 - MLT1D LTR MaLR 0 505 37 316 209 14 135 chr20 21383015 21383058 -45284947 + MIR SINE MIR 124 171 -91 2134 158 12 45 chr20 21383058 21383295 -45284710 - MLT1B LTR MaLR -4 386 166 2879 7 0 0 chr20 21383295 21383601 -45284404 + AluYa5 SINE Alu 1 306 -5 2134 158 12 45 chr20 21383601 21383762 -45284243 - MLT1B LTR MaLR -224 166 1 316 209 14 135 chr20 21383762 21383866 -45284139 + MIR SINE MIR 171 253 -9 1484 182 138 50 chr20 21384372 21384827 -45283178 + L1ME2 LINE L1 5670 6164 0 2540 221 43 14 chr20 21385393 21385786 -45282219 - MLT1G LTR MaLR -5 585 169 2431 64 0 0 chr20 21385786 21386096 -45281909 + AluY SINE Alu 1 310 0 2540 221 43 14 chr20 21386096 21386261 -45281744 - MLT1G LTR MaLR -421 169 10 225 288 0 15 chr20 21386525 21386591 -45281414 + HAL1 LINE L1 745 809 -1698 286 254 63 58 chr20 21386708 21386897 -45281108 + HAL1 LINE L1 851 1040 -1467 2109 117 3 13 chr20 21386943 21387241 -45280764 + AluSx SINE Alu 1 295 -17 295 279 30 77 chr20 21387519 21387752 -45280253 + HAL1b LINE L1 678 899 -449 1729 95 15 5 chr20 21387881 21388142 -45279863 - L1PA8 LINE L1 0 6172 5862 350 288 72 40 chr20 21388140 21388362 -45279643 + HAL1 LINE L1 2255 2483 -24 * 711 199 23 27 chr20 21388499 21388677 -45279328 - MIR SINE MIR -26 236 62 1241 134 6 0 chr20 21388677 21388856 -45279149 - LTR12 LTR ERV1 -158 556 377 287 245 31 20 chr20 21388857 21388955 -45279050 - LTR30 LTR ERV1 -80 642 544 5711 111 50 66 chr20 21388955 21390128 -45277877 - pTR5 LTR ERV1 -413 2025 741 1924 137 0 0 chr20 21390411 21390682 -45277323 + AluSx SINE Alu 17 287 -25 682 249 117 19 chr20 21391003 21391268 -45276737 + MLT1G LTR MaLR 127 417 -173 24 0 0 0 chr20 21391327 21391351 -45276654 + AT_rich Low_complexity Low_complexity 1 24 0 855 185 23 12 chr20 21391580 21391753 -45276252 + MER5B DNA MER1_type 1 175 -3 273 186 47 58 chr20 21391753 21391839 -45276166 - MER5A DNA MER1_type -65 124 40 360 244 197 0 chr20 21391947 21392074 -45275931 + MIR SINE MIR 108 259 -3 356 215 13 0 chr20 21394306 21394385 -45273620 - MER5A DNA MER1_type -80 109 30 1086 236 103 29 chr20 21394787 21395232 -45272773 + Charlie4a DNA MER1_type 29 506 -2 264 161 48 32 chr20 21395535 21395597 -45272408 - Charlie8 DNA MER1_type -2253 164 102 1801 175 0 7 chr20 21395699 21395996 -45272009 + AluJb SINE Alu 1 295 -17 445 183 53 154 chr20 21396173 21396381 -45271624 - MER53 DNA DNA 0 189 3 843 243 37 8 chr20 21396498 21396741 -45271264 - L1ME3A LINE L1 -8 6162 5913 240 35 0 0 chr20 21396769 21396798 -45271207 + (TG)n Simple_repeat Simple_repeat 2 30 0 1562 225 116 17 chr20 21396881 21397286 -45270719 + LTR16C LTR ERVL 43 487 -4 256 282 56 0 chr20 21397322 21397393 -45270612 - L2 LINE L2 -3 3310 3236 247 287 84 49 chr20 21399686 21399829 -45268176 + MIR SINE MIR 2 149 -113 2575 262 78 58 chr20 21400299 21401299 -45266706 - HAL1 LINE L1 -3 2504 1525 360 64 0 0 chr20 21401299 21401346 -45266659 + (TA)n Simple_repeat Simple_repeat 2 48 0 2575 262 78 58 chr20 21401346 21401505 -45266500 - HAL1 LINE L1 -982 1525 1371 2466 67 0 7 chr20 21401505 21401805 -45266200 + AluY SINE Alu 1 298 -13 2575 262 78 58 chr20 21401805 21401913 -45266092 - HAL1 LINE L1 -1136 1371 1211 250 380 73 0 chr20 21401892 21402042 -45265963 - HAL1 LINE L1 -2044 463 303 * 561 264 51 17 chr20 21402045 21402223 -45265782 - HAL1 LINE L1 -2323 184 1 675 270 85 31 chr20 21403547 21403840 -45264165 + LTR16B LTR ERVL 154 462 -2 2251 115 3 0 chr20 21404569 21404874 -45263131 - AluSx SINE Alu -6 306 1 312 293 25 96 chr20 21405345 21405408 -45262597 + MIR3 SINE MIR 20 86 -122 2494 181 77 4 chr20 21405408 21405889 -45262116 + MLT2B1 LTR ERVL 5 520 0 312 293 25 96 chr20 21405889 21405982 -45262023 + MIR3 SINE MIR 86 165 -43 308 212 0 127 chr20 21407254 21407372 -45260633 - MER5A DNA MER1_type -84 105 3 548 227 87 13 chr20 21409302 21409452 -45258553 + MER3 DNA MER1_type 1 161 -48 3952 127 0 3 chr20 21410064 21410645 -45257360 - L1PB3 LINE L1 0 6154 5576 819 214 6 0 chr20 21413006 21413165 -45254840 - FRAM SINE Alu -22 154 1 645 97 0 0 chr20 21413324 21413427 -45254578 + (TCC)n Simple_repeat Simple_repeat 2 104 0 274 344 86 8 chr20 21414812 21414940 -45253065 + MIR3 SINE MIR 21 158 -50 882 271 106 11 chr20 21414967 21415344 -45252661 - MER113 DNA MER1_type? -43 478 66 360 0 0 0 chr20 21415720 21415760 -45252245 + (TG)n Simple_repeat Simple_repeat 2 41 0 2219 80 0 30 chr20 21416152 21416452 -45251553 + AluY SINE Alu 1 291 -20 671 81 0 0 chr20 21416630 21416717 -45251288 + AluS SINE Alu 2 88 -224 364 231 131 15 chr20 21418757 21418887 -45249118 - MLT1J LTR MaLR -169 342 198 306 291 76 52 chr20 21418877 21419087 -45248918 - MLT1L LTR MaLR -367 248 34 * 2095 125 0 0 chr20 21419147 21419451 -45248554 + AluSx SINE Alu 1 304 -8 398 254 85 32 chr20 21421030 21421219 -45246786 - L2 LINE L2 -208 3064 2866 219 103 0 0 chr20 21421564 21421603 -45246402 + (T)n Simple_repeat Simple_repeat 1 39 0 895 294 136 26 chr20 21421649 21422184 -45245821 - L2 LINE L2 -991 2323 1730 375 268 35 102 chr20 21422190 21422281 -45245724 - L1ME4a LINE L1 -229 5892 5796 1439 187 3 11 chr20 21422281 21422564 -45245441 - AluJo SINE Alu -31 281 1 375 268 35 102 chr20 21422564 21422756 -45245249 - L1ME4a LINE L1 -325 5796 5625 1334 190 105 5 chr20 21424161 21424638 -45243367 - MLT1F1 LTR MaLR -1 566 3 2186 93 17 0 chr20 21424699 21425000 -45243005 + AluSx SINE Alu 2 307 -5 353 309 10 0 chr20 21426816 21426913 -45241092 + MIR SINE MIR 65 162 -100 761 200 8 0 chr20 21427107 21427237 -45240768 + FLAM_A SINE Alu 2 132 -1 392 280 82 22 chr20 21427382 21427564 -45240441 - L1MC5 LINE L1 -52 7909 7717 264 59 0 0 chr20 21427600 21427634 -45240371 + (T)n Simple_repeat Simple_repeat 1 34 0 6390 58 15 49 chr20 21427636 21429487 -45238518 - SVA Other Other -551 1383 1 263 96 19 0 chr20 21429487 21429539 -45238466 + (GGGAGA)n Simple_repeat Simple_repeat 2 54 0 356 192 56 32 chr20 21429560 21429685 -45238320 - L1MC5 LINE L1 -254 7707 7580 192 125 0 0 chr20 21429775 21429807 -45238198 + (TG)n Simple_repeat Simple_repeat 1 32 0 188 86 29 0 chr20 21429924 21429959 -45238046 + (TG)n Simple_repeat Simple_repeat 1 36 0 782 126 0 6 chr20 21429973 21430132 -45237873 + (TG)n Simple_repeat Simple_repeat 1 158 0 406 171 8 114 chr20 21430385 21430508 -45237497 - L1MC5 LINE L1 -698 7263 7154 1555 158 4 7 chr20 21431931 21432209 -45235796 + AluSx SINE Alu 33 309 -3 313 227 64 22 chr20 21432453 21432586 -45235419 + MIR SINE MIR 7 150 -63 230 159 23 0 chr20 21433823 21433867 -45234138 + GA-rich Low_complexity Low_complexity 1 45 0 360 189 0 31 chr20 21433869 21433996 -45234009 + (TGGA)n Simple_repeat Simple_repeat 1 123 0 228 266 0 0 chr20 21435198 21435262 -45232743 + GA-rich Low_complexity Low_complexity 2 65 0 2968 176 2 6 chr20 21435529 21436028 -45231977 - LOR1a LTR ERV1 0 497 1 823 214 254 25 chr20 21436938 21437331 -45230674 - MLT1E3 LTR MaLR -3 621 139 419 142 18 124 chr20 21438087 21438200 -45229805 - MER5A DNA MER1_type -83 106 6 383 259 36 18 chr20 21438785 21438951 -45229054 + (TA)n Simple_repeat Simple_repeat 1 169 0 331 261 210 25 chr20 21439020 21439177 -45228828 + L1ME4a LINE L1 5934 6119 -2 433 244 23 69 chr20 21439401 21439532 -45228473 + L2 LINE L2 3189 3313 0 2160 112 0 10 chr20 21439673 21439985 -45228020 + AluSx SINE Alu 1 309 -3 682 286 167 24 chr20 21440928 21441688 -45226317 - L2 LINE L2 -17 3296 2432 574 255 48 7 chr20 21441721 21441866 -45226139 - MIR SINE MIR -64 198 48 23 54 0 0 chr20 21442034 21442071 -45225934 + AT_rich Low_complexity Low_complexity 1 37 0 1801 220 112 10 chr20 21442109 21442608 -45225397 + L1ME2 LINE L1 5538 6087 -77 465 268 170 78 chr20 21443438 21443915 -45224090 - MLT1H LTR MaLR 0 549 29 250 313 30 20 chr20 21443932 21444031 -45223974 + MIR3 SINE MIR 109 208 0 676 179 19 51 chr20 21445439 21445595 -45222410 - L1PB4 LINE L1 0 6156 6006 767 212 0 0 chr20 21445688 21445834 -45222171 - L1PB4 LINE L1 -154 6002 5857 1798 179 0 3 chr20 21445933 21446246 -45221759 - AluJo SINE Alu 0 312 1 675 167 7 13 chr20 21446860 21447010 -45220995 + GA-rich Low_complexity Low_complexity 1 149 0 400 290 7 65 chr20 21447278 21447433 -45220572 - MIR SINE MIR -58 204 59 2639 118 39 5 chr20 21447826 21448240 -45219765 - MSTA LTR MaLR 0 428 1 1633 234 9 0 chr20 21448795 21449132 -45218873 - MER58B DNA MER1_type 0 341 2 637 279 146 25 chr20 21449509 21449824 -45218181 - MER68 LTR ERV1 -13 549 197 225 313 47 60 chr20 21449887 21450037 -45217968 - MER77 LTR ERV1 -444 161 14 500 313 90 40 chr20 21450068 21450445 -45217560 - MLT1J2 LTR MaLR -2 448 53 237 95 48 24 chr20 21450447 21450489 -45217516 + MER3 DNA MER1_type 160 202 -7 550 271 175 10 chr20 21450508 21450822 -45217183 - L1ME4a LINE L1 -77 6044 5679 21 36 0 0 chr20 21451274 21451302 -45216703 + AT_rich Low_complexity Low_complexity 1 28 0 454 191 0 0 chr20 21452678 21452762 -45215243 - L1ME4a LINE L1 -1163 4983 4900 346 312 24 32 chr20 21453946 21454071 -45213934 + L2 LINE L2 3136 3259 -13 519 69 0 0 chr20 21454071 21454143 -45213862 + (TGGA)n Simple_repeat Simple_repeat 1 72 0 324 351 9 0 chr20 21454220 21454334 -45213671 - MIR SINE MIR 0 262 148 * 481 279 111 75 chr20 21454326 21454713 -45213292 - L2 LINE L2 -2 3311 2911 244 208 222 0 chr20 21454821 21454893 -45213112 - MIR SINE MIR -110 152 65 399 264 57 14 chr20 21456126 21456266 -45211739 - L2 LINE L2 0 3313 3168 984 319 210 15 chr20 21457376 21458091 -45209914 - L2 LINE L2 -508 2806 1953 242 259 301 12 chr20 21458112 21458278 -45209727 + L2 LINE L2 3015 3228 -44 636 237 15 0 chr20 21458446 21458577 -45209428 - MER63A DNA MER1_type 0 210 78 866 264 71 19 chr20 21458871 21459182 -45208823 - LTR16C LTR ERVL -6 485 159 1417 124 0 0 chr20 21459358 21459560 -45208445 + AluSg/x SINE Alu 92 293 -19 429 327 18 60 chr20 21459642 21459863 -45208142 + MIR SINE MIR 1 214 -48 667 197 14 27 chr20 21460679 21460826 -45207179 + L1ME2 LINE L1 6019 6163 -1 428 268 3 0 chr20 21460993 21461354 -45206651 + (CA)n Simple_repeat Simple_repeat 1 362 0 231 311 0 0 chr20 21461380 21461541 -45206464 + (CA)n Simple_repeat Simple_repeat 1 161 0 2085 121 3 0 chr20 21461567 21461865 -45206140 - AluSc SINE Alu -10 299 1 1487 215 0 13 chr20 21461876 21462178 -45205827 - AluJb SINE Alu -14 298 1 724 271 69 2 chr20 21462629 21463032 -45204973 + L1ME2 LINE L1 5699 6143 -21 296 304 134 18 chr20 21463462 21463574 -45204431 - L2 LINE L2 -2 3270 3146 750 274 26 13 chr20 21463638 21463868 -45204137 - MIR SINE MIR -12 250 18 851 240 29 0 chr20 21463870 21464045 -45203960 - MER58A DNA MER1_type 0 224 45 1877 159 0 6 chr20 21464048 21464362 -45203643 + AluJo SINE Alu 1 312 0 1023 160 44 0 chr20 21465952 21466133 -45201872 - MER5A DNA MER1_type 0 189 1 846 225 24 29 chr20 21466267 21466476 -45201529 - MER3 DNA MER1_type 0 209 2 1523 159 38 0 chr20 21466549 21466813 -45201192 + AluJb SINE Alu 21 294 -18 297 333 54 50 chr20 21468349 21468571 -45199434 - MIR SINE MIR -35 227 5 2824 253 148 93 chr20 21468642 21470030 -45197975 - L2 LINE L2 -926 2388 723 371 216 270 0 chr20 21470030 21470178 -45197827 + MER3 DNA MER1_type 1 188 -21 2824 253 148 93 chr20 21470178 21470590 -45197415 - L2 LINE L2 -2591 723 335 1595 51 0 0 chr20 21474757 21474953 -45193052 + AluY SINE Alu 96 291 -20 186 43 0 0 chr20 21475219 21475242 -45192763 + (CA)n Simple_repeat Simple_repeat 1 23 0 480 287 132 0 chr20 21476514 21476681 -45191324 - MER5A DNA MER1_type 0 189 1 1828 145 3 0 chr20 21477808 21478091 -45189914 + AluJo SINE Alu 21 304 -8 1735 155 3 19 chr20 21478262 21478572 -45189433 + AluJb SINE Alu 1 305 -7 2179 118 36 33 chr20 21478889 21479252 -45188753 + THE1B LTR MaLR 1 364 0 2123 98 3 0 chr20 21479304 21479599 -45188406 - AluSp SINE Alu -17 296 1 356 87 0 0 chr20 21480376 21480422 -45187583 - AluJb SINE Alu -137 165 120 5555 102 35 36 chr20 21481552 21482075 -45185930 - L1MA3 LINE L1 0 6305 5782 2247 99 3 0 chr20 21482075 21482379 -45185626 - AluSg1 SINE Alu -4 305 1 5555 102 35 36 chr20 21482379 21482789 -45185216 - L1MA3 LINE L1 -523 5782 5373 892 124 0 102 chr20 21483197 21483383 -45184622 - AluSg/x SINE Alu -6 304 138 27 0 0 0 chr20 21483808 21483835 -45184170 + AT_rich Low_complexity Low_complexity 1 27 0 466 220 32 75 chr20 21483999 21484185 -45183820 + MER5B DNA MER1_type 1 178 0 180 0 0 0 chr20 21484307 21484327 -45183678 + (GA)n Simple_repeat Simple_repeat 1 20 0 922 251 0 9 chr20 21484352 21484563 -45183442 + MER3 DNA MER1_type 1 209 0 699 165 152 43 chr20 21484697 21484861 -45183144 + MER5A DNA MER1_type 1 182 -7 2293 74 0 7 chr20 21486095 21486392 -45181613 - AluSc SINE Alu -14 295 1 1628 195 0 16 chr20 21486412 21486725 -45181280 + AluJo SINE Alu 5 312 0 720 266 66 60 chr20 21486785 21487206 -45180799 - LTR37B LTR ERV1 0 468 42 192 77 0 0 chr20 21487206 21487232 -45180773 + (CCCTAA)n Simple_repeat Simple_repeat 3 28 0 720 266 66 60 chr20 21487232 21487264 -45180741 - LTR37B LTR ERV1 -426 42 12 1810 190 47 49 chr20 21488223 21488411 -45179594 + MLT1C LTR MaLR 1 188 -279 2122 118 0 0 chr20 21488411 21488736 -45179269 + AluSq SINE Alu 1 313 0 1810 190 47 49 chr20 21488736 21489015 -45178990 + MLT1C LTR MaLR 188 467 0 553 275 187 37 chr20 21490977 21491464 -45176541 + HAL1 LINE L1 1362 1921 -586 255 125 0 0 chr20 21491545 21491585 -45176420 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 707 238 14 0 chr20 21492403 21492546 -45175459 + MER5B DNA MER1_type 10 154 -24 217 316 115 63 chr20 21492573 21492747 -45175258 + MER5A DNA MER1_type 7 189 0 695 223 82 55 chr20 21493360 21493578 -45174427 + MLT1E LTR MaLR 65 288 -305 1753 242 16 18 chr20 21493578 21494025 -45173980 + MER89 LTR ERV1 1 446 -113 361 326 54 0 chr20 21494029 21494158 -45173847 - L2 LINE L2 -1390 1924 1789 984 200 14 73 chr20 21494206 21494255 -45173750 - MER58A DNA MER1_type -2213 207 157 2060 120 3 3 chr20 21494255 21494554 -45173451 - AluSx SINE Alu -13 299 1 2910 152 29 34 chr20 21494563 21495122 -45172883 - MER74A LTR ERVL -2 556 1 984 200 14 73 chr20 21495122 21495282 -45172723 - MER58A DNA MER1_type -2271 149 1 615 310 112 55 chr20 21495342 21495603 -45172402 + HAL1b LINE L1 221 466 -882 991 224 112 88 chr20 21495603 21496138 -45171867 - MLT1H LTR MaLR -1 548 1 615 310 112 55 chr20 21496138 21496441 -45171564 + HAL1b LINE L1 466 817 -531 1280 158 97 24 chr20 21496819 21497154 -45170851 - MSTD LTR MaLR 0 396 1 255 297 46 67 chr20 21497404 21497643 -45170362 + L2 LINE L2 2512 2745 -569 761 313 92 29 chr20 21497667 21498082 -45169923 + L2 LINE L2 2871 3311 -2 1887 115 52 3 chr20 21498084 21498320 -45169685 + AluSc SINE Alu 3 257 -52 207 0 0 0 chr20 21498320 21498343 -45169662 + (CACTC)n Simple_repeat Simple_repeat 5 27 0 1887 115 52 3 chr20 21498343 21498393 -45169612 + AluSc SINE Alu 257 303 -6 448 337 42 39 chr20 21498567 21498926 -45169079 + L1M4 LINE L1 2205 2564 -3582 478 283 44 112 chr20 21499151 21499402 -45168603 + L1M4 LINE L1 2678 2911 -3235 3314 161 71 3 chr20 21499455 21500033 -45167972 + MER41B LTR ERV1 17 633 -2 28 0 0 0 chr20 21500062 21500090 -45167915 + AT_rich Low_complexity Low_complexity 1 28 0 1864 149 7 0 chr20 21500124 21500419 -45167586 + AluJb SINE Alu 2 298 -14 180 0 0 0 chr20 21500846 21500866 -45167139 + (GGAGA)n Simple_repeat Simple_repeat 2 21 0 712 185 23 52 chr20 21501201 21501374 -45166631 + L2 LINE L2 3144 3311 -2 669 256 104 15 chr20 21501679 21501949 -45166056 + L2 LINE L2 2467 2760 -554 1377 154 124 77 chr20 21501976 21502404 -45165601 - LTR7 LTR ERV1 -2 448 1 2518 82 45 13 chr20 21502404 21502782 -45165223 - HERVH LTR ERV1 0 7713 7324 381 118 105 53 chr20 21502782 21502858 -45165147 - HERVH LTR ERV1 -1894 5819 5740 * 2936 114 7 2 chr20 21502845 21503282 -45164723 - HERVH LTR ERV1 -3783 3930 3492 866 162 20 0 chr20 21503272 21503420 -45164585 - HERVH LTR ERV1 -4423 3290 3140 * 19992 89 51 7 chr20 21503414 21506273 -45161732 - HERVH LTR ERV1 -4726 2987 1 1414 156 121 77 chr20 21506275 21506704 -45161301 - LTR7 LTR ERV1 -2 448 1 370 285 57 0 chr20 21506853 21506976 -45161029 + L2 LINE L2 3141 3270 -2 323 209 0 23 chr20 21508075 21508161 -45159844 + C-rich Low_complexity Low_complexity 5 88 0 1956 127 7 0 chr20 21509510 21509801 -45158204 + AluSx SINE Alu 1 293 -19 184 286 0 88 chr20 21510858 21510949 -45157056 + L2 LINE L2 3231 3313 0 301 299 78 7 chr20 21511287 21511441 -45156564 + MER103 DNA DNA 1 165 -1 2062 97 0 4 chr20 21512678 21512986 -45155019 - AluSq SINE Alu 0 313 7 1877 133 0 11 chr20 21513030 21513338 -45154667 + AluSx SINE Alu 1 305 0 258 81 0 0 chr20 21513449 21513486 -45154519 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 227 308 29 29 chr20 21514617 21514789 -45153216 - L1M4 LINE L1 -1090 5056 4885 689 99 20 0 chr20 21514846 21514947 -45153058 - AluSx SINE Alu -5 307 205 1063 62 0 0 chr20 21514947 21515077 -45152928 - AluSx SINE Alu -182 130 1 185 286 71 12 chr20 21515311 21515395 -45152610 + MIR3 SINE MIR 7 95 -113 2239 111 30 0 chr20 21516566 21516864 -45151141 + AluSx SINE Alu 1 307 -5 3697 137 55 0 chr20 21516914 21517529 -45150476 - MER39B LTR ERV1 0 653 5 2344 81 10 3 chr20 21517569 21517867 -45150138 + AluSq SINE Alu 1 300 -13 271 271 107 0 chr20 21518136 21518258 -45149747 - LTR16A1 LTR ERVL -1 456 322 299 327 83 6 chr20 21518370 21518526 -45149479 - LTR16C LTR ERVL -321 170 3 2209 95 0 41 chr20 21518840 21519157 -45148848 - AluSx SINE Alu -3 309 6 2007 126 110 40 chr20 21520638 21521012 -45146993 - MER21A LTR ERV1 -20 911 512 1566 209 98 6 chr20 21521013 21521329 -45146676 - MER21B LTR ERV1 -518 345 1 181 316 59 7 chr20 21521335 21521471 -45146534 + L2 LINE L2 1049 1191 -2123 254 213 53 40 chr20 21521659 21521734 -45146271 + MER112 DNA MER1_type 152 227 -33 1052 265 96 49 chr20 21521751 21522389 -45145616 + L2 LINE L2 1305 1972 -1342 449 190 13 0 chr20 21522389 21522468 -45145537 - MER45 DNA AcHobo -960 80 1 320 346 47 0 chr20 21522696 21522823 -45145182 - MIR SINE MIR -113 149 17 1090 177 55 124 chr20 21522871 21523289 -45144716 - MLT1B LTR MaLR 0 390 2 223 141 56 14 chr20 21523789 21523860 -45144145 + (TATAA)n Simple_repeat Simple_repeat 2 75 0 385 328 179 6 chr20 21524663 21525154 -45142851 - L2 LINE L2 -575 2739 2164 315 346 78 4 chr20 21525470 21525701 -45142304 - MIR SINE MIR -13 249 2 3122 112 24 93 chr20 21525997 21526377 -45141628 + MER4B LTR ERV1 1 486 -293 2295 122 0 0 chr20 21526377 21526688 -45141317 + AluSx SINE Alu 1 311 -1 3122 112 24 93 chr20 21526688 21526963 -45141042 + MER4B LTR ERV1 486 779 0 208 306 45 18 chr20 21528173 21528284 -45139721 - MIR3 SINE MIR -4 204 91 471 269 53 62 chr20 21528297 21528524 -45139481 - MIR SINE MIR -10 252 28 183 244 44 0 chr20 21529262 21529307 -45138698 - L2 LINE L2 -16 3256 3210 245 242 33 0 chr20 21529935 21530026 -45137979 - L1ME4a LINE L1 0 6121 6028 607 308 53 4 chr20 21530570 21530797 -45137208 + MIR SINE MIR 6 243 -19 498 305 133 13 chr20 21530952 21531185 -45136820 - MLT1J2 LTR MaLR -119 331 71 1703 138 0 8 chr20 21531408 21531655 -45136350 - AluSq SINE Alu -68 245 1 2102 117 31 0 chr20 21532210 21532500 -45135505 + AluSx SINE Alu 1 299 -13 833 247 151 47 chr20 21533484 21533929 -45134076 - LTR16C LTR ERVL 0 491 1 228 67 0 0 chr20 21534248 21534278 -45133727 + (TG)n Simple_repeat Simple_repeat 1 30 0 249 33 0 0 chr20 21535199 21535229 -45132776 + (CA)n Simple_repeat Simple_repeat 2 31 0 1050 253 74 106 chr20 21535993 21536599 -45131406 + MLT1G LTR MaLR 1 582 -8 2386 95 0 7 chr20 21537070 21537374 -45130631 + AluSg SINE Alu 3 304 -6 606 255 184 5 chr20 21537442 21537654 -45130351 + MIR SINE MIR 8 257 -5 350 223 66 146 chr20 21537984 21538240 -45129765 + L1M4 LINE L1 3957 4191 -1955 1908 157 3 23 chr20 21538240 21538546 -45129459 + AluSq SINE Alu 1 300 -13 350 223 66 146 chr20 21538546 21538563 -45129442 + L1M4 LINE L1 4191 4208 -1938 1837 245 72 25 chr20 21538572 21539307 -45128698 + L1M4 LINE L1 4335 5104 -1042 303 91 0 0 chr20 21539312 21539356 -45128649 + L1ME3 LINE L1 6112 6155 -7 471 314 220 5 chr20 21539653 21540026 -45127979 - L3 LINE CR1 -73 1504 1052 611 191 0 37 chr20 21540438 21540574 -45127431 + FLAM_A SINE Alu 1 131 -2 184 299 195 0 chr20 21542599 21542743 -45125262 + MIR SINE MIR 58 228 -34 287 25 25 0 chr20 21542867 21542907 -45125098 + (TG)n Simple_repeat Simple_repeat 2 42 0 1323 211 73 3 chr20 21543016 21543319 -45124686 - MER33 DNA MER1_type 0 324 1 1922 120 85 0 chr20 21544201 21544484 -45123521 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr20 21544827 21544848 -45123157 + AT_rich Low_complexity Low_complexity 1 21 0 499 185 22 0 chr20 21545895 21546038 -45121967 + AluY SINE Alu 218 362 0 551 267 43 51 chr20 21546288 21546543 -45121462 - MER112 DNA MER1_type 0 256 4 420 210 232 7 chr20 21546560 21546698 -45121307 - MER5B DNA MER1_type -5 173 5 2239 86 34 0 chr20 21547787 21548078 -45119927 - AluY SINE Alu -10 301 1 255 152 0 0 chr20 21548549 21548595 -45119410 + (TG)n Simple_repeat Simple_repeat 2 47 0 22 0 0 0 chr20 21548632 21548654 -45119351 + AT_rich Low_complexity Low_complexity 1 22 0 1821 180 0 3 chr20 21548832 21549126 -45118879 - AluJb SINE Alu -17 295 3 409 287 13 33 chr20 21549921 21550071 -45117934 - MIR SINE MIR -6 256 110 847 248 124 32 chr20 21550239 21550554 -45117451 + MLT1G3 LTR MaLR 1 344 -251 469 218 30 105 chr20 21550580 21550713 -45117292 + MLT1G3 LTR MaLR 429 551 -44 376 331 22 17 chr20 21550713 21550891 -45117114 - MIR SINE MIR -71 191 13 194 0 0 37 chr20 21551206 21551233 -45116772 + (TTTTA)n Simple_repeat Simple_repeat 4 29 0 2430 67 0 3 chr20 21551249 21551547 -45116458 - AluY SINE Alu -13 298 2 581 236 23 14 chr20 21552047 21552232 -45115773 - MIR SINE MIR -63 145 13 711 193 7 22 chr20 21552280 21552415 -45115590 + FLAM_C SINE Alu 1 133 0 2205 123 9 0 chr20 21553223 21553564 -45114441 + L1P LINE L1 4694 5037 -1109 8773 121 0 30 chr20 21553568 21554956 -45113049 - L1P LINE L1 -1438 4708 3363 360 175 0 0 chr20 21554956 21555019 -45112986 - MIR SINE MIR -104 158 96 435 306 60 9 chr20 21555096 21555312 -45112693 - LTR16C LTR ERVL -38 453 227 2358 103 0 0 chr20 21555337 21555629 -45112376 - AluSx SINE Alu -20 292 1 5797 51 1 4 chr20 21555646 21556358 -45111647 - L1PA7 LINE L1 0 6154 5445 250 183 30 168 chr20 21556492 21556542 -45111463 - MLT1H LTR MaLR -8 541 486 1646 174 75 3 chr20 21556542 21556824 -45111181 + AluJb SINE Alu 1 302 -10 250 183 30 168 chr20 21556824 21556904 -45111101 - MLT1H LTR MaLR -63 486 429 503 349 12 0 chr20 21557029 21557201 -45110804 - MLT1H LTR MaLR -298 251 78 2120 123 0 29 chr20 21560044 21560353 -45107652 + AluSx SINE Alu 1 300 -12 2484 49 0 61 chr20 21560611 21560938 -45107067 - AluY SINE Alu -4 307 1 1110 280 69 3 chr20 21561064 21561428 -45106577 - LTR16C LTR ERVL -30 461 74 273 305 42 8 chr20 21561669 21561787 -45106218 + L1MC4a LINE L1 5815 5936 -1872 * 311 226 21 11 chr20 21561777 21561870 -45106135 - L1MB7 LINE L1 -5 6179 6086 * 2981 217 31 6 chr20 21561869 21562514 -45105491 - L1ME1 LINE L1 -230 5936 5276 247 106 0 43 chr20 21562521 21562568 -45105437 + L1MD3 LINE L1 7941 7985 -10 440 322 47 28 chr20 21563326 21563537 -45104468 - L2 LINE L2 0 3313 3099 28 48 0 0 chr20 21563643 21563685 -45104320 + AT_rich Low_complexity Low_complexity 1 42 0 1522 187 34 10 chr20 21564526 21564820 -45103185 - AluJo SINE Alu -11 301 1 22 35 0 0 chr20 21564886 21564915 -45103090 + AT_rich Low_complexity Low_complexity 1 29 0 751 225 157 64 chr20 21566710 21567107 -45100898 + HAL1 LINE L1 1914 2391 -116 1839 196 14 19 chr20 21567107 21567470 -45100535 - MLT1A1 LTR MaLR -4 361 1 751 225 157 64 chr20 21567470 21567598 -45100407 + HAL1 LINE L1 2391 2506 -1 329 319 8 8 chr20 21567650 21567769 -45100236 - MIR SINE MIR -133 129 11 1646 146 51 42 chr20 21567860 21568237 -45099768 - Tigger3(Golem) DNA MER2_type -2 3027 1 2130 110 0 0 chr20 21568408 21568689 -45099316 + AluSg SINE Alu 30 310 0 293 317 107 39 chr20 21568735 21568940 -45099065 + L1MC4a LINE L1 5700 5918 -1890 1712 193 67 20 chr20 21569048 21569405 -45098600 - MLT1A2 LTR MaLR 0 374 1 1701 165 37 0 chr20 21569488 21569761 -45098244 - AluJb SINE Alu -29 283 1 341 217 198 0 chr20 21570629 21570735 -45097270 - MER5A DNA MER1_type -4 185 59 336 245 61 95 chr20 21570789 21570936 -45097069 + MER63A DNA MER1_type 53 194 -16 300 331 0 8 chr20 21571054 21571184 -45096821 + L2 LINE L2 2245 2373 -941 192 40 0 0 chr20 21572579 21572604 -45095401 + (CA)n Simple_repeat Simple_repeat 2 26 0 30 45 0 0 chr20 21572864 21572908 -45095097 + AT_rich Low_complexity Low_complexity 1 44 0 382 175 12 25 chr20 21572987 21573067 -45094938 - MIR SINE MIR -110 152 74 481 306 17 12 chr20 21574389 21574562 -45093443 + MER69A DNA AcHobo 1 174 -3 580 277 104 43 chr20 21574822 21575198 -45092807 + LTR16A1 LTR ERVL 58 456 -1 296 273 11 0 chr20 21575246 21575334 -45092671 - L3 LINE CR1 -128 1449 1361 182 278 74 28 chr20 21575722 21575830 -45092175 - L3 LINE CR1 -730 847 735 25 31 0 0 chr20 21576163 21576195 -45091810 + AT_rich Low_complexity Low_complexity 1 32 0 343 225 258 26 chr20 21576198 21576349 -45091656 - MIR SINE MIR -3 259 74 259 254 118 0 chr20 21576442 21576552 -45091453 - MER113 DNA MER1_type? -398 123 1 2399 97 0 0 chr20 21576903 21577203 -45090802 - AluSq SINE Alu -13 300 1 210 71 0 0 chr20 21577725 21577753 -45090252 + (T)n Simple_repeat Simple_repeat 1 28 0 350 214 64 121 chr20 21578746 21578919 -45089086 + LTR33A LTR ERVL 12 174 -349 238 261 15 0 chr20 21579511 21579576 -45088429 - LTR67 LTR ERVL 0 557 492 602 262 37 29 chr20 21580605 21580849 -45087156 + LTR16A LTR ERVL 3 248 -202 576 193 34 0 chr20 21580884 21581003 -45087002 + LTR16A LTR ERVL 321 443 -7 221 303 0 0 chr20 21581929 21581995 -45086010 - MIR SINE MIR -21 241 176 374 349 34 8 chr20 21582097 21582335 -45085670 + LTR16B LTR ERVL 134 377 -87 * 887 184 38 14 chr20 21582332 21582558 -45085447 + MER74A LTR ERVL 73 346 -276 * 1241 210 20 78 chr20 21582555 21582902 -45085103 - MLT1A1 LTR MaLR -38 327 1 * 1518 192 17 3 chr20 21582902 21583187 -45084818 + MER74A LTR ERVL 263 551 -7 1069 154 0 0 chr20 21583230 21583392 -45084613 - L1PA8A LINE L1 -18 6113 5952 572 235 139 36 chr20 21583675 21583926 -45084079 + LTR16A1 LTR ERVL 142 418 -39 566 262 73 0 chr20 21584734 21585081 -45082924 + AluJb SINE Alu 137 495 0 201 156 0 0 chr20 21585081 21585113 -45082892 + GA-rich Low_complexity Low_complexity 1 32 0 363 303 77 54 chr20 21586433 21586786 -45081219 - L1M4 LINE L1 -1542 4604 4244 519 241 68 72 chr20 21586917 21587097 -45080908 - MIR SINE MIR -2 260 80 387 0 0 0 chr20 21587097 21587140 -45080865 + (CA)n Simple_repeat Simple_repeat 2 44 0 519 241 68 72 chr20 21587140 21587195 -45080810 - MIR SINE MIR -182 80 26 310 311 101 34 chr20 21587327 21587536 -45080469 - L1MC/D LINE L1 -2331 5477 5255 22 0 0 0 chr20 21587621 21587643 -45080362 + AT_rich Low_complexity Low_complexity 1 22 0 342 141 0 47 chr20 21587663 21587748 -45080257 + (TTTC)n Simple_repeat Simple_repeat 3 83 0 944 157 0 6 chr20 21588328 21588487 -45079518 - L1MB7 LINE L1 -322 5862 5705 217 329 0 12 chr20 21589341 21589423 -45078582 - MIR SINE MIR -117 145 65 377 216 128 24 chr20 21589940 21590065 -45077940 + L1ME4a LINE L1 5983 6120 -1 719 197 0 15 chr20 21591001 21591138 -45076867 - FAM SINE Alu -14 171 37 10092 128 38 24 chr20 21591681 21592124 -45075881 + Tigger1 DNA MER2_type 769 1204 -1214 1969 107 0 63 chr20 21592124 21592469 -45075536 - AluSx SINE Alu 0 326 1 10092 128 38 24 chr20 21592469 21593651 -45074354 + Tigger1 DNA MER2_type 1204 2418 0 1226 26 0 7 chr20 21594521 21594672 -45073333 + (TTC)n Simple_repeat Simple_repeat 2 151 0 10164 80 14 1 chr20 21594675 21596795 -45071210 - L1PA7 LINE L1 -13 6141 4004 506 301 7 0 chr20 21596819 21596965 -45071040 - Charlie8 DNA MER1_type -2185 232 86 1136 205 75 0 chr20 21597479 21597772 -45070233 + MER33 DNA MER1_type 10 324 0 931 238 10 5 chr20 21597785 21597978 -45070027 - MER58A DNA MER1_type -1 223 30 573 176 68 23 chr20 21598008 21598160 -45069845 + L1ME3A LINE L1 6008 6167 -2 2369 95 0 10 chr20 21598180 21598484 -45069521 + AluSc SINE Alu 1 301 -8 1985 130 13 41 chr20 21600610 21600905 -45067100 + AluSq SINE Alu 1 288 -25 877 56 8 8 chr20 21600905 21601030 -45066975 + (GGAA)n Simple_repeat Simple_repeat 3 127 0 1985 130 13 41 chr20 21601030 21601050 -45066955 + AluSq SINE Alu 288 307 -6 1597 169 15 11 chr20 21601368 21601634 -45066371 + AluJo SINE Alu 1 267 -45 325 215 18 141 chr20 21601735 21601898 -45066107 - MLT1H LTR MaLR -1 548 406 500 214 46 38 chr20 21602049 21602180 -45065825 - MLT1H LTR MaLR -389 160 29 15824 38 2 0 chr20 21602811 21605458 -45062547 - L1PA5 LINE L1 0 6154 3503 761 235 115 47 chr20 21605471 21605721 -45062284 + HsTC2a DNA Tc2 74 306 -1592 2278 113 0 0 chr20 21605721 21606023 -45061982 + AluSg SINE Alu 1 302 -8 761 235 115 47 chr20 21606023 21606239 -45061766 + HsTC2a DNA Tc2 306 638 -104 1168 157 0 79 chr20 21606245 21606474 -45061531 + AluJo SINE Alu 86 296 -16 563 116 0 11 chr20 21606485 21606580 -45061425 + (GGAA)n Simple_repeat Simple_repeat 4 97 0 313 258 21 11 chr20 21606588 21606681 -45061324 + HsTC2a DNA Tc2 645 738 -4 3017 223 61 52 chr20 21606903 21607633 -45060372 - L1ME3 LINE L1 -3 6159 5416 699 211 0 0 chr20 21607633 21607769 -45060236 + FLAM_A SINE Alu 2 137 0 3017 223 61 52 chr20 21607769 21608116 -45059889 - L1ME3 LINE L1 -746 5416 5074 193 368 149 0 chr20 21608372 21608600 -45059405 - L3 LINE CR1 -1072 505 244 310 219 42 31 chr20 21609213 21609309 -45058696 + MIR SINE MIR 3 99 -163 434 324 23 0 chr20 21609517 21609733 -45058272 + L2 LINE L2 2173 2393 -921 1424 290 26 0 chr20 21609780 21610159 -45057846 - LTR16C LTR ERVL -34 457 69 187 53 26 26 chr20 21610226 21610264 -45057741 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2064 99 18 21 chr20 21610266 21610550 -45057455 - AluSx SINE Alu -29 283 1 1171 157 34 0 chr20 21611288 21611492 -45056513 + MER31A LTR ERV1 1 211 -274 1219 121 83 194 chr20 21611948 21612237 -45055768 + MER31A LTR ERV1 131 367 -118 2188 99 0 3 chr20 21612237 21612556 -45055449 + AluSx SINE Alu 1 318 0 1219 121 83 194 chr20 21612556 21612662 -45055343 + MER31A LTR ERV1 367 483 -2 219 349 0 35 chr20 21612671 21612757 -45055248 + L2 LINE L2 3151 3233 -39 1402 233 50 9 chr20 21613348 21613666 -45054339 + LTR16C LTR ERVL 161 491 0 534 252 76 57 chr20 21613879 21614089 -45053916 + MER106A DNA MER1_type 1 214 -22 457 261 55 70 chr20 21614495 21614767 -45053238 - LTR37B LTR ERV1 0 468 201 416 230 202 37 chr20 21614993 21615175 -45052830 + MER63B DNA MER1_type 1 1059 -3 1732 174 10 26 chr20 21615408 21615719 -45052286 - AluJo SINE Alu -6 306 1 3508 101 13 4 chr20 21615811 21616276 -45051729 - MER1A DNA MER1_type -1 528 60 1980 142 0 0 chr20 21616545 21616852 -45051153 - AluSx SINE Alu 0 307 1 21 0 0 0 chr20 21616926 21616947 -45051058 + AT_rich Low_complexity Low_complexity 1 21 0 369 195 47 39 chr20 21616962 21617090 -45050915 - L1MC4 LINE L1 0 8042 7914 2172 238 31 20 chr20 21617121 21617705 -45050300 - L1MC4 LINE L1 -117 7925 7336 267 335 60 56 chr20 21618484 21618726 -45049279 - L2 LINE L2 -42 3230 2985 2197 95 3 7 chr20 21618726 21619032 -45048973 + AluSx SINE Alu 1 305 -7 267 335 60 56 chr20 21619032 21619108 -45048897 - L2 LINE L2 -287 2985 2911 1520 143 70 14 chr20 21619538 21619720 -45048285 - AluJo SINE Alu 0 312 107 378 0 0 0 chr20 21619720 21619762 -45048243 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1520 143 70 14 chr20 21619762 21619865 -45048140 - AluJo SINE Alu -205 107 11 1793 276 68 30 chr20 21619878 21620292 -45047713 - L1MC4 LINE L1 -3 8039 7583 1997 147 7 0 chr20 21620292 21620599 -45047406 + AluSx SINE Alu 1 309 -3 1793 276 68 30 chr20 21620599 21620915 -45047090 - L1MC4 LINE L1 -459 7583 7281 244 211 18 18 chr20 21620928 21620985 -45047020 + MLT1L LTR MaLR 555 611 -4 485 191 48 9 chr20 21621218 21621323 -45046682 + AluJb SINE Alu 2 110 -202 267 333 35 0 chr20 21621323 21621410 -45046595 - LTR16C LTR ERVL -170 321 232 2012 125 67 30 chr20 21621898 21622259 -45045746 + THE1C LTR MaLR 1 374 -1 250 199 12 123 chr20 21622626 21622686 -45045319 - LTR37A LTR ERV1 -2 424 359 900 210 5 15 chr20 21622686 21622886 -45045119 + L1PB4 LINE L1 5955 6152 -4 250 199 12 123 chr20 21622886 21622996 -45045009 - LTR37A LTR ERV1 -67 359 273 1707 149 7 26 chr20 21623013 21623353 -45044652 - AluJb SINE Alu 0 312 1 910 230 34 10 chr20 21623359 21623568 -45044437 - MER58A DNA MER1_type -10 214 1 527 241 66 6 chr20 21623569 21623735 -45044270 - LTR37A LTR ERV1 -155 271 96 3031 194 68 5 chr20 21623735 21623989 -45044016 - MER82 DNA MER2_type 0 653 417 273 29 0 0 chr20 21623989 21624023 -45043982 + (TG)n Simple_repeat Simple_repeat 2 35 0 3031 194 68 5 chr20 21624023 21624367 -45043638 - MER82 DNA MER2_type -236 417 17 551 232 7 58 chr20 21624478 21624633 -45043372 + LTR16C LTR ERVL 345 491 0 243 0 0 0 chr20 21624770 21624797 -45043208 + (TTTTA)n Simple_repeat Simple_repeat 2 28 0 1871 150 0 0 chr20 21624800 21625087 -45042918 - AluSx SINE Alu -24 288 2 2136 97 0 27 chr20 21625093 21625392 -45042613 - AluSg SINE Alu -19 291 1 727 208 46 0 chr20 21625417 21625547 -45042458 + FRAM SINE Alu 1 131 -45 27 29 0 0 chr20 21625547 21625581 -45042424 + AT_rich Low_complexity Low_complexity 1 34 0 316 127 0 18 chr20 21626213 21626268 -45041737 + U5 snRNA snRNA 1 54 -62 2154 104 16 3 chr20 21626550 21626859 -45041146 + AluSq SINE Alu 1 313 0 1668 164 10 7 chr20 21627664 21627957 -45040048 + AluJb SINE Alu 1 294 -18 1092 302 53 14 chr20 21628065 21628601 -45039404 + MER115 DNA AcHobo 89 682 -11 1876 137 17 10 chr20 21629898 21630198 -45037807 + AluSx SINE Alu 1 302 -10 1317 196 127 0 chr20 21630320 21630595 -45037410 - AluJb SINE Alu -2 310 1 318 337 42 0 chr20 21630659 21630754 -45037251 - L2 LINE L2 0 3272 3174 896 188 59 30 chr20 21631081 21631283 -45036722 - MER63A DNA MER1_type -1 209 2 839 185 0 51 chr20 21631497 21631675 -45036330 - FRAM SINE Alu -11 165 1 979 154 16 21 chr20 21632662 21632850 -45035155 + Tigger2 DNA MER2_type 3 189 -2529 870 183 52 0 chr20 21632842 21632995 -45035010 + Tigger2 DNA MER2_type 2558 2718 0 * 1714 161 0 10 chr20 21633265 21633570 -45034435 - AluJo SINE Alu -10 302 1 709 160 0 76 chr20 21633892 21634036 -45033969 - FLAM_C SINE Alu -9 134 2 1676 152 3 27 chr20 21634062 21634359 -45033646 + AluJo SINE Alu 1 290 -22 21 0 0 0 chr20 21634359 21634380 -45033625 + AT_rich Low_complexity Low_complexity 1 21 0 1393 140 23 104 chr20 21635146 21635311 -45032694 + L1MA8 LINE L1 5956 6078 -213 1959 126 3 25 chr20 21635311 21635629 -45032376 + AluSx SINE Alu 1 311 -1 1393 140 23 104 chr20 21635629 21635827 -45032178 + L1MA8 LINE L1 6078 6291 0 189 196 0 0 chr20 21635873 21635919 -45032086 + G-rich Low_complexity Low_complexity 5 50 0 219 139 0 0 chr20 21636521 21636557 -45031448 + (TTC)n Simple_repeat Simple_repeat 2 37 0 1567 148 60 25 chr20 21636954 21637237 -45030768 - AluJo SINE Alu -13 299 7 23 0 0 0 chr20 21637269 21637292 -45030713 + AT_rich Low_complexity Low_complexity 1 23 0 284 0 28 0 chr20 21639981 21640017 -45027988 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 1093 279 44 49 chr20 21640624 21641125 -45026880 - MER110 LTR ERV1 -6 462 1 2036 121 0 32 chr20 21641464 21641779 -45026226 + AluSx SINE Alu 1 305 -7 204 67 0 0 chr20 21642130 21642160 -45025845 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 2114 82 4 0 chr20 21642160 21642440 -45025565 - AluSg1 SINE Alu -28 281 1 191 36 36 0 chr20 21642495 21642523 -45025482 + (TTTC)n Simple_repeat Simple_repeat 3 31 0 527 127 0 0 chr20 21642524 21642603 -45025402 - AluJ/FLAM SINE Alu -232 80 2 242 289 83 33 chr20 21642857 21642978 -45025027 - L2 LINE L2 -22 3291 3165 1902 143 3 3 chr20 21643717 21644025 -45023980 + AluSx SINE Alu 1 308 -4 31 0 0 0 chr20 21644314 21644345 -45023660 + AT_rich Low_complexity Low_complexity 1 31 0 581 217 17 0 chr20 21644363 21644478 -45023527 - FLAM_C SINE Alu -25 118 2 210 189 27 27 chr20 21644503 21644577 -45023428 + CT-rich Low_complexity Low_complexity 5 78 0 1570 128 0 4 chr20 21646104 21646346 -45021659 - AluSg/x SINE Alu 0 312 72 896 149 21 10 chr20 21646708 21646902 -45021103 - Charlie5 DNA MER1_type 0 2612 2417 560 161 15 106 chr20 21646971 21647029 -45020976 - MER33 DNA MER1_type -97 65 73 1882 143 0 10 chr20 21647029 21647336 -45020669 - AluSx SINE Alu -8 304 1 560 161 15 106 chr20 21647336 21647410 -45020595 - MER33 DNA MER1_type -88 74 1 273 152 0 22 chr20 21647410 21647456 -45020549 - MIR3 SINE MIR -50 158 114 1602 183 0 7 chr20 21647641 21647941 -45020064 - AluJo SINE Alu -14 298 1 1614 203 37 17 chr20 21648332 21648740 -45019265 - LTR37B LTR ERV1 0 468 53 302 234 50 59 chr20 21648792 21648953 -45019052 + L1M4 LINE L1 2879 3035 -3111 1439 230 155 22 chr20 21649374 21649850 -45018155 - MLT1F1 LTR MaLR -9 558 14 713 181 62 119 chr20 21649874 21650117 -45017888 - MER102a DNA MER1_type -5 325 97 2031 112 37 0 chr20 21650129 21650425 -45017580 + AluSx SINE Alu 1 307 -5 855 129 0 50 chr20 21650435 21650574 -45017431 + FLAM_C SINE Alu 2 133 0 2252 85 20 0 chr20 21650596 21650901 -45017104 + AluSp SINE Alu 1 311 -2 410 229 174 0 chr20 21650901 21651010 -45016995 + MER5A DNA MER1_type 62 189 0 2190 110 3 0 chr20 21651662 21651970 -45016035 + AluSx SINE Alu 1 309 -3 521 174 261 7 chr20 21651970 21652108 -45015897 - MIR SINE MIR -18 244 72 654 298 75 26 chr20 21652436 21652598 -45015407 - MER90 LTR ERV1 -17 558 405 598 142 120 87 chr20 21652598 21652739 -45015266 + MER53 DNA DNA 1 152 -37 2172 81 0 0 chr20 21652739 21653053 -45014952 + AluY SINE Alu 1 314 0 598 142 120 87 chr20 21653053 21653093 -45014912 + MER53 DNA DNA 152 189 0 654 298 75 26 chr20 21653093 21653319 -45014686 - MER90 LTR ERV1 -170 405 151 953 177 18 0 chr20 21653494 21653658 -45014347 + MER20 DNA MER1_type 53 219 0 282 250 40 105 chr20 21653790 21653896 -45014109 + L2 LINE L2 3197 3308 -5 1972 96 70 0 chr20 21653896 21654168 -45013837 + AluSx SINE Alu 1 291 -21 260 27 27 0 chr20 21654168 21654205 -45013800 + (TA)n Simple_repeat Simple_repeat 2 39 0 282 250 40 105 chr20 21654205 21654221 -45013784 + L2 LINE L2 3306 3312 -1 221 286 22 55 chr20 21654262 21654353 -45013652 - L2 LINE L2 -1 3312 3225 196 319 168 13 chr20 21654372 21654598 -45013407 - L2 LINE L2 -210 3103 2843 749 228 46 64 chr20 21655310 21655368 -45012637 + MER58A DNA MER1_type 10 68 -2352 1401 141 47 78 chr20 21655368 21655688 -45012317 + AluJo SINE Alu 1 310 -2 749 228 46 64 chr20 21655688 21655848 -45012157 + MER58A DNA MER1_type 68 224 0 255 333 45 15 chr20 21655871 21656003 -45012002 - MIR SINE MIR -71 191 56 1780 169 3 7 chr20 21656095 21656391 -45011614 + AluJo SINE Alu 1 295 -17 247 290 0 14 chr20 21656409 21656478 -45011527 - Charlie8 DNA MER1_type 0 2417 2350 253 246 321 8 chr20 21656541 21656675 -45011330 - Charlie8 DNA MER1_type -2141 276 101 1941 145 11 103 chr20 21656840 21657275 -45010730 - MSTD LTR MaLR 0 396 2 444 233 98 38 chr20 21657755 21657888 -45010117 + MIR SINE MIR 57 197 -65 2456 62 0 0 chr20 21658137 21658445 -45009560 + AluY SINE Alu 1 308 -3 2085 114 3 0 chr20 21658792 21659091 -45008914 - AluSq SINE Alu -13 300 1 353 215 83 56 chr20 21659584 21659728 -45008277 - MIR SINE MIR -113 149 2 22 0 0 0 chr20 21660072 21660094 -45007911 + AT_rich Low_complexity Low_complexity 1 22 0 1895 154 13 0 chr20 21660094 21660400 -45007605 - AluSx SINE Alu -2 310 1 183 156 0 0 chr20 21660411 21660443 -45007562 + T-rich Low_complexity Low_complexity 1 32 0 2082 110 3 7 chr20 21660498 21660797 -45007208 - AluSx SINE Alu -14 298 1 495 238 14 49 chr20 21660807 21660950 -45007055 - L1MC4 LINE L1 -2 8040 7903 2081 104 0 10 chr20 21660984 21661281 -45006724 - AluSq SINE Alu -19 294 1 408 260 60 97 chr20 21661318 21661637 -45006368 - L1MC4 LINE L1 -120 7922 7616 325 250 48 0 chr20 21661671 21661755 -45006250 - L1ME3A LINE L1 -8 6162 6075 2171 123 0 0 chr20 21662393 21662702 -45005303 - AluSq SINE Alu 0 313 5 380 68 0 0 chr20 21663165 21663224 -45004781 - L1MB3 LINE L1 0 6183 6125 740 192 0 0 chr20 21663255 21663375 -45004630 - FLAM_C SINE Alu -13 120 1 2771 143 16 2 chr20 21663376 21663503 -45004502 - L1MB3 LINE L1 -41 6142 6016 856 277 62 11 chr20 21663503 21663860 -45004145 - L1ME2 LINE L1 -139 6025 5651 267 315 72 9 chr20 21664486 21664597 -45003408 - L2 LINE L2 -8 3264 3147 315 250 271 0 chr20 21664605 21664745 -45003260 + MER5A DNA MER1_type 10 187 -2 692 207 85 38 chr20 21665051 21665402 -45002603 - LTR16C LTR ERVL -7 484 79 2257 95 0 0 chr20 21665887 21666191 -45001814 + AluSc SINE Alu 1 304 -5 1434 182 68 0 chr20 21666264 21666544 -45001461 + AluJo SINE Alu 1 299 -13 315 272 22 0 chr20 21666600 21666692 -45001313 - MER103 DNA DNA -13 153 60 27 0 0 0 chr20 21667023 21667050 -45000955 + AT_rich Low_complexity Low_complexity 1 27 0 590 286 77 18 chr20 21667676 21667949 -45000056 - L1ME4a LINE L1 -272 5849 5561 253 269 127 75 chr20 21668101 21668235 -44999770 - MIR3 SINE MIR -20 188 48 346 158 168 20 chr20 21668236 21668281 -44999724 - LTR37B LTR ERV1 -9 459 422 369 0 0 0 chr20 21668281 21668322 -44999683 + (TG)n Simple_repeat Simple_repeat 2 42 0 346 158 168 20 chr20 21668322 21668377 -44999628 - LTR37B LTR ERV1 -46 422 344 393 191 18 131 chr20 21668556 21668724 -44999281 - LTR37B LTR ERV1 -196 272 124 253 304 78 0 chr20 21669336 21669451 -44998554 + MER104 DNA Tc2 46 169 -11 1914 134 40 0 chr20 21669452 21669750 -44998255 + AluSx SINE Alu 1 310 -2 2501 49 0 7 chr20 21669940 21670247 -44997758 + AluY SINE Alu 1 305 -6 1998 124 13 3 chr20 21670593 21670900 -44997105 - AluSx SINE Alu -2 310 1 234 0 0 0 chr20 21670916 21670942 -44997063 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 351 293 38 0 chr20 21671421 21671527 -44996478 - L2 LINE L2 -19 3294 3185 553 260 56 62 chr20 21671592 21671777 -44996228 - LTR16C LTR ERVL 0 491 306 324 0 0 0 chr20 21671777 21671813 -44996192 + (TTTG)n Simple_repeat Simple_repeat 4 39 0 1957 125 0 0 chr20 21671813 21672093 -44995912 - AluSx SINE Alu -32 280 1 553 260 56 62 chr20 21672093 21672210 -44995795 - LTR16C LTR ERVL -183 308 190 246 311 98 30 chr20 21672924 21673056 -44994949 - MIR SINE MIR -114 148 8 2038 98 0 0 chr20 21673069 21673419 -44994586 + AluSg SINE Alu 7 356 0 819 115 0 39 chr20 21673434 21673564 -44994441 + AluJo SINE Alu 12 136 -176 346 184 0 151 chr20 21673916 21674128 -44993877 + C-rich Low_complexity Low_complexity 1 180 0 280 212 11 112 chr20 21674144 21674323 -44993682 + C-rich Low_complexity Low_complexity 3 163 0 358 220 6 96 chr20 21674357 21674534 -44993471 + C-rich Low_complexity Low_complexity 3 163 0 203 333 11 0 chr20 21674510 21674603 -44993402 + (CACCC)n Simple_repeat Simple_repeat 3 96 0 * 2392 80 3 0 chr20 21674654 21674966 -44993039 - AluSp SINE Alu 0 313 1 441 287 174 29 chr20 21675501 21676131 -44991874 + L1ME2 LINE L1 5295 6036 -85 1651 155 3 17 chr20 21677183 21677343 -44990662 - AluJo SINE Alu -20 292 136 1968 141 3 3 chr20 21677343 21677642 -44990363 - AluSx SINE Alu -13 299 1 1651 155 3 17 chr20 21677642 21677777 -44990228 - AluJo SINE Alu -176 136 1 2143 114 0 0 chr20 21677833 21678130 -44989875 - AluSx SINE Alu -15 297 1 243 0 0 0 chr20 21679269 21679296 -44988709 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1996 126 0 0 chr20 21679304 21679589 -44988416 - AluSx SINE Alu -27 285 1 717 194 0 15 chr20 21680896 21681030 -44986975 + AluJo SINE Alu 3 134 -178 22 0 0 0 chr20 21681194 21681216 -44986789 + AT_rich Low_complexity Low_complexity 1 22 0 802 163 16 0 chr20 21681244 21681367 -44986638 - FLAM_C SINE Alu -17 126 2 281 155 28 0 chr20 21681368 21681439 -44986566 - Charlie5 DNA MER1_type -128 2484 2412 654 107 100 29 chr20 21681448 21681588 -44986417 - L1MA4 LINE L1 0 6300 6151 327 276 114 32 chr20 21681678 21681801 -44986204 - L1ME3 LINE L1 -299 5863 5731 438 228 58 95 chr20 21681874 21681968 -44986037 - L1ME3 LINE L1 -549 5617 5532 1671 208 67 11 chr20 21681968 21682343 -44985662 + MSTD LTR MaLR 1 396 0 438 228 58 95 chr20 21682343 21682437 -44985568 - L1ME3 LINE L1 -634 5532 5436 1559 286 116 39 chr20 21682537 21683571 -44984434 + L2 LINE L2 2081 3272 0 891 171 78 81 chr20 21683680 21683735 -44984270 - Charlie1 DNA MER1_type -1 2760 2706 2043 126 0 3 chr20 21683735 21684037 -44983968 - AluSx SINE Alu -11 301 1 891 171 78 81 chr20 21684037 21684239 -44983766 - Charlie1 DNA MER1_type -55 2706 2504 189 153 305 17 chr20 21684252 21684311 -44983694 + L2 LINE L2 3197 3272 0 234 272 10 78 chr20 21686110 21686213 -44981792 + MIR3 SINE MIR 104 199 -9 232 310 20 20 chr20 21686896 21686996 -44981009 - MIR SINE MIR -42 220 121 470 184 46 9 chr20 21687551 21687660 -44980345 - Charlie4 DNA MER1_type -42 1919 1807 695 199 83 22 chr20 21687719 21687900 -44980105 - Charlie4 DNA MER1_type -1712 249 58 432 317 40 5 chr20 21687901 21688125 -44979880 + L2 LINE L2 1924 2155 -1159 1713 149 0 21 chr20 21688125 21688452 -44979553 - AluJo SINE Alu 0 321 1 720 219 6 24 chr20 21688499 21688668 -44979337 + MIR SINE MIR 86 251 -11 1164 243 252 38 chr20 21688694 21688974 -44979031 + L2 LINE L2 2173 2392 -921 1922 133 0 17 chr20 21688974 21689275 -44978730 - AluSx SINE Alu -16 296 1 1164 243 252 38 chr20 21689275 21689771 -44978234 + L2 LINE L2 2392 2781 -532 1700 156 13 16 chr20 21689771 21690079 -44977926 - AluSx SINE Alu -5 307 1 1164 243 252 38 chr20 21690079 21690224 -44977781 + L2 LINE L2 2781 3312 -1 2016 130 10 0 chr20 21691760 21692060 -44975945 + AluSg SINE Alu 1 303 -7 243 0 0 0 chr20 21693903 21693930 -44974075 + (T)n Simple_repeat Simple_repeat 1 27 0 215 365 79 16 chr20 21695035 21695161 -44972844 - MIR3 SINE MIR -67 141 8 1661 150 29 23 chr20 21696361 21696668 -44971337 + AluSx SINE Alu 1 309 -3 2111 103 28 0 chr20 21696676 21696967 -44971038 + AluSx SINE Alu 1 299 -13 778 141 0 47 chr20 21697147 21697275 -44970730 + FLAM_A SINE Alu 1 122 -11 30 27 0 0 chr20 21697276 21697313 -44970692 + AT_rich Low_complexity Low_complexity 1 37 0 1524 92 0 0 chr20 21698332 21698539 -44969466 - AluSg/x SINE Alu -22 290 84 830 207 0 11 chr20 21698729 21698903 -44969102 - AluJb SINE Alu -11 301 130 2015 119 3 10 chr20 21698925 21699227 -44968778 + AluSx SINE Alu 1 300 -12 448 228 104 47 chr20 21700352 21700497 -44967508 - L1MD3 LINE L1 -3 8039 7904 180 0 0 0 chr20 21700497 21700517 -44967488 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 448 228 104 47 chr20 21700517 21700631 -44967374 - L1MD3 LINE L1 -138 7904 7768 862 181 7 39 chr20 21700635 21700810 -44967195 - AluSg/x SINE Alu 0 301 132 1626 166 0 14 chr20 21700812 21701102 -44966903 - AluJb SINE Alu -7 305 20 1152 286 43 13 chr20 21701147 21701616 -44966389 - L1MC4 LINE L1 -381 7661 7179 209 307 129 21 chr20 21701618 21701758 -44966247 - MIR SINE MIR -102 160 6 1043 211 155 48 chr20 21701897 21702310 -44965695 - LTR16A1 LTR ERVL 0 457 1 487 244 131 12 chr20 21702847 21703015 -44964990 + MER5A DNA MER1_type 2 189 0 213 146 24 0 chr20 21703024 21703065 -44964940 - MER5B DNA MER1_type -1 177 136 1895 126 24 7 chr20 21703066 21703359 -44964646 - AluSx SINE Alu -12 300 3 225 0 0 0 chr20 21703359 21703384 -44964621 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 1694 132 40 4 chr20 21703384 21703657 -44964348 - AluSx SINE Alu -29 283 1 214 238 0 0 chr20 21703657 21703699 -44964306 - MER5B DNA MER1_type -135 43 2 349 333 25 25 chr20 21704390 21704594 -44963411 + MIR SINE MIR 15 218 -44 239 327 58 10 chr20 21704712 21704816 -44963189 + MIR SINE MIR 39 147 -115 2483 180 8 17 chr20 21704872 21705263 -44962742 - L1MB7 LINE L1 -17 6167 5779 1815 169 0 3 chr20 21705263 21705564 -44962441 - AluJb SINE Alu -12 300 1 2483 180 8 17 chr20 21705564 21705645 -44962360 - L1MB7 LINE L1 -405 5779 5699 2239 109 0 3 chr20 21705902 21706215 -44961790 + AluSx SINE Alu 1 312 0 1951 125 0 14 chr20 21707322 21707619 -44960386 + AluSx SINE Alu 1 293 -19 847 219 41 5 chr20 21707635 21707831 -44960174 - MER3 DNA MER1_type -2 207 5 2050 135 0 0 chr20 21708514 21708825 -44959180 + AluSx SINE Alu 1 311 -1 1152 201 23 5 chr20 21708946 21709165 -44958840 - MER58A DNA MER1_type -1 223 1 405 202 56 11 chr20 21709733 21709822 -44958183 - MER91C DNA MER1_type -41 99 7 373 250 90 101 chr20 21709979 21710167 -44957838 - Charlie8 DNA MER1_type -2159 258 73 361 309 135 7 chr20 21710795 21711014 -44956991 + MIR SINE MIR 7 256 -6 1623 130 62 46 chr20 21711946 21712253 -44955752 + AluJb SINE Alu 1 312 0 1742 114 0 8 chr20 21712642 21712897 -44955108 + AluSx SINE Alu 41 293 -19 298 213 43 149 chr20 21712967 21713108 -44954897 - MIR SINE MIR -51 211 86 2144 90 17 0 chr20 21713264 21713553 -44954452 + AluSp SINE Alu 6 299 -14 2154 123 0 0 chr20 21713783 21714091 -44953914 - AluSx SINE Alu -4 308 1 787 121 9 0 chr20 21714220 21714336 -44953669 - FLAM_C SINE Alu -16 117 1 366 205 0 0 chr20 21715245 21715328 -44952677 + (CA)n Simple_repeat Simple_repeat 2 84 0 2163 121 0 0 chr20 21715533 21715839 -44952166 - AluSx SINE Alu -6 306 1 182 61 0 61 chr20 21715887 21715920 -44952085 + (TTTC)n Simple_repeat Simple_repeat 3 33 0 2223 91 3 3 chr20 21716253 21716550 -44951455 - AluSq SINE Alu -16 297 1 246 105 0 0 chr20 21716830 21716868 -44951137 + (CA)n Simple_repeat Simple_repeat 2 39 0 369 232 21 32 chr20 21717644 21717739 -44950266 - MER5A DNA MER1_type -77 112 19 447 274 177 27 chr20 21717785 21717971 -44950034 - MIR SINE MIR -43 219 6 282 179 0 0 chr20 21718371 21718427 -44949578 + (TG)n Simple_repeat Simple_repeat 1 56 0 1066 278 116 14 chr20 21719239 21719653 -44948352 + L2 LINE L2 2858 3313 0 183 42 0 0 chr20 21719691 21719715 -44948290 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 437 221 11 0 chr20 21720070 21720165 -44947840 + MER5A DNA MER1_type 10 105 -84 1999 134 0 0 chr20 21721663 21721969 -44946036 - AluSx SINE Alu -6 306 1 252 350 0 0 chr20 21722495 21722575 -44945430 - L2 LINE L2 -5 3267 3188 1568 177 65 30 chr20 21722745 21723117 -44944888 - Charlie5 DNA MER1_type 0 2620 2236 603 211 8 0 chr20 21723119 21723242 -44944763 - Charlie5 DNA MER1_type -2488 124 1 2236 96 0 0 chr20 21723434 21723736 -44944269 + AluSx SINE Alu 1 302 -10 268 308 58 58 chr20 21726121 21726293 -44941712 - L1ME3A LINE L1 -5 6165 5994 236 77 26 0 chr20 21726749 21726788 -44941217 + (TC)n Simple_repeat Simple_repeat 2 41 0 187 294 118 59 chr20 21727393 21727580 -44940425 - MIR SINE MIR -13 249 52 198 0 0 0 chr20 21729539 21729561 -44938444 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 2301 85 3 7 chr20 21729688 21729994 -44938011 + AluSq SINE Alu 1 305 -8 297 246 55 55 chr20 21730982 21731092 -44936913 - MIR SINE MIR -50 212 103 377 275 99 0 chr20 21731190 21731321 -44936684 - L1MD3 LINE L1 -434 7561 7418 429 213 0 32 chr20 21731336 21731430 -44936575 - MLT1F1 LTR MaLR -442 125 35 359 118 3 3 chr20 21731430 21731492 -44936513 - L1MC3 LINE L1 -688 7097 7048 246 171 0 0 chr20 21732180 21732221 -44935784 - MIR SINE MIR -117 145 105 338 264 99 8 chr20 21732459 21732580 -44935425 + MIR SINE MIR 12 143 -119 1406 238 106 20 chr20 21732621 21733016 -44934989 + LTR16C LTR ERVL 63 491 0 201 211 175 0 chr20 21733056 21733113 -44934892 + MIR SINE MIR 195 261 -1 442 261 67 36 chr20 21733270 21733435 -44934570 + MIR SINE MIR 92 261 -1 851 178 0 7 chr20 21733609 21733761 -44934244 - L1PB4 LINE L1 -6 6150 6000 1230 71 36 0 chr20 21733813 21733981 -44934024 - L1PA5 LINE L1 0 6154 5981 1069 46 0 8 chr20 21733982 21734113 -44933892 + L1PA5 LINE L1 5851 5980 -174 1888 169 11 31 chr20 21734128 21734412 -44933593 - MER7A DNA MER2_type -2692 346 71 2195 114 0 0 chr20 21734412 21734711 -44933294 + AluSx SINE Alu 1 299 -13 1888 169 11 31 chr20 21734711 21734780 -44933225 - MER7A DNA MER2_type -2967 71 2 761 151 0 50 chr20 21735518 21735657 -44932348 + FLAM_C SINE Alu 2 133 -10 500 301 93 6 chr20 21735762 21735945 -44932060 + MIR SINE MIR 25 223 -39 1461 238 56 60 chr20 21736733 21737213 -44930792 - L1ME3 LINE L1 -4 6158 5681 586 238 32 43 chr20 21737408 21737593 -44930412 + MIR SINE MIR 78 260 -2 1854 155 0 3 chr20 21738044 21738347 -44929658 - AluSx SINE Alu -10 302 1 1253 157 44 189 chr20 21738699 21739176 -44928829 - L1MC4 LINE L1 0 8042 7635 2161 121 0 7 chr20 21739197 21739503 -44928502 - AluSx SINE Alu -8 304 1 877 204 85 15 chr20 21741314 21741515 -44926490 - MER20 DNA MER1_type -4 215 1 846 210 0 0 chr20 21742277 21742444 -44925561 - L1MB5 LINE L1 0 6174 6008 382 135 0 27 chr20 21742510 21742584 -44925421 - L1ME4a LINE L1 -3 6118 6047 335 281 114 36 chr20 21744870 21745037 -44922968 - MLT1I LTR MaLR -8 401 222 27 0 0 0 chr20 21745179 21745206 -44922799 + AT_rich Low_complexity Low_complexity 1 27 0 1945 121 7 0 chr20 21745961 21746278 -44921727 + AluSx SINE Alu 1 319 0 200 289 118 52 chr20 21746282 21746417 -44921588 + L2 LINE L2 3163 3306 -7 2221 103 0 0 chr20 21747404 21747704 -44920301 + AluSx SINE Alu 1 300 -12 2110 99 0 20 chr20 21747906 21748209 -44919796 - AluSx SINE Alu -15 297 1 1643 153 3 45 chr20 21748243 21748557 -44919448 + AluJo SINE Alu 1 301 -11 501 206 10 0 chr20 21749105 21749207 -44918798 + MIR SINE MIR 66 168 -94 298 217 0 14 chr20 21749463 21749532 -44918473 + MER53 DNA DNA 122 189 0 246 227 0 91 chr20 21749835 21749923 -44918082 - MER116 DNA Mariner 0 80 1 694 215 0 15 chr20 21749976 21750111 -44917894 + FLAM_A SINE Alu 1 133 0 270 81 0 0 chr20 21751279 21751316 -44916689 + (T)n Simple_repeat Simple_repeat 1 37 0 312 279 48 58 chr20 21752753 21752857 -44915148 + L2 LINE L2 3210 3312 -1 678 126 16 63 chr20 21753357 21753484 -44914521 + FRAM SINE Alu 45 165 -11 2175 107 3 0 chr20 21754117 21754425 -44913580 + AluSx SINE Alu 1 309 -3 21 0 0 0 chr20 21754585 21754606 -44913399 + AT_rich Low_complexity Low_complexity 1 21 0 1556 151 7 32 chr20 21754629 21754913 -44913092 - AluJb SINE Alu -7 305 29 544 233 68 14 chr20 21755569 21755715 -44912290 + MER5B DNA MER1_type 3 156 -22 1327 192 38 22 chr20 21755873 21756190 -44911815 - MER33 DNA MER1_type -2 322 1 322 256 25 50 chr20 21756335 21756456 -44911549 + MIR SINE MIR 144 261 -1 2455 65 0 0 chr20 21756654 21756962 -44911043 - AluY SINE Alu -3 308 1 309 218 161 0 chr20 21757772 21757859 -44910146 + MER5A DNA MER1_type 12 112 -77 2207 100 3 0 chr20 21758448 21758748 -44909257 + AluSp SINE Alu 3 303 -10 504 241 69 86 chr20 21759092 21759271 -44908734 - HAL1 LINE L1 -27 2480 2305 2204 110 7 0 chr20 21759271 21759579 -44908426 - AluSx SINE Alu -2 310 1 504 241 69 86 chr20 21759579 21759644 -44908361 - HAL1 LINE L1 -202 2305 2240 408 289 35 75 chr20 21759690 21759891 -44908114 - HAL1 LINE L1 -1797 710 518 454 240 119 96 chr20 21759974 21760286 -44907719 - HAL1 LINE L1 -2185 322 4 30 27 0 0 chr20 21760293 21760330 -44907675 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr20 21760447 21760470 -44907535 + AT_rich Low_complexity Low_complexity 1 23 0 249 33 0 0 chr20 21761020 21761050 -44906955 + (TTCC)n Simple_repeat Simple_repeat 2 31 0 510 153 0 0 chr20 21761129 21761214 -44906791 - AluS SINE Alu 0 310 226 204 125 0 0 chr20 21761229 21761261 -44906744 + (TTCCC)n Simple_repeat Simple_repeat 3 34 0 816 179 0 7 chr20 21761274 21761414 -44906591 - AluJo SINE Alu -53 259 121 671 115 44 9 chr20 21761415 21761567 -44906438 - FLAM_C SINE Alu 0 182 27 346 245 29 10 chr20 21761585 21761687 -44906318 - L1ME1 LINE L1 -5 6161 6058 389 171 6 79 chr20 21761689 21761761 -44906244 - L1ME1 LINE L1 -180 5986 5910 2108 139 0 0 chr20 21761761 21762071 -44905934 + AluSx SINE Alu 1 310 -2 389 171 6 79 chr20 21762071 21762313 -44905692 - L1ME1 LINE L1 -256 5910 5516 593 268 70 95 chr20 21762455 21762855 -44905150 + HAL1b LINE L1 376 765 -583 1053 132 6 0 chr20 21762872 21763039 -44904966 + AluSg/x SINE Alu 145 312 0 2097 102 0 7 chr20 21763054 21763348 -44904657 + AluSg1 SINE Alu 1 292 -17 965 154 12 0 chr20 21763354 21763523 -44904482 + AluSg/x SINE Alu 142 312 0 183 100 0 0 chr20 21763707 21763737 -44904268 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2180 94 0 13 chr20 21763747 21764045 -44903960 - AluSg SINE Alu -16 294 1 216 0 0 0 chr20 21764045 21764069 -44903936 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 2103 92 0 0 chr20 21764069 21764350 -44903655 - AluSx SINE Alu -30 282 2 497 224 109 61 chr20 21764350 21764644 -44903361 + HAL1b LINE L1 1041 1348 0 744 200 39 0 chr20 21764930 21765085 -44902920 - MIR SINE MIR -5 257 97 401 215 70 104 chr20 21765678 21765948 -44902057 + LTR37A LTR ERV1 8 268 -158 914 198 0 0 chr20 21765954 21766126 -44901879 - AluJb SINE Alu -3 309 138 1002 196 43 43 chr20 21766179 21766460 -44901545 + Charlie5 DNA MER1_type 2234 2514 -98 259 198 38 85 chr20 21766501 21766550 -44901455 + Charlie5 DNA MER1_type 2500 2550 -74 2056 78 9 56 chr20 21766550 21766872 -44901133 - AluSx SINE Alu -5 307 1 259 198 38 85 chr20 21766872 21766928 -44901077 + Charlie5 DNA MER1_type 2550 2600 -24 195 217 157 24 chr20 21768543 21768626 -44899379 + L3b LINE CR1 1292 1385 -198 412 298 139 14 chr20 21768656 21768864 -44899141 - MIR SINE MIR -16 246 13 234 225 113 0 chr20 21769105 21769176 -44898829 + L1MC4 LINE L1 7912 7990 -52 1834 179 0 3 chr20 21769514 21769811 -44898194 - AluJo SINE Alu -14 298 3 303 231 173 19 chr20 21769950 21770054 -44897951 - L2 LINE L2 -1 3312 3193 307 309 31 0 chr20 21770062 21770159 -44897846 - Charlie1 DNA MER1_type -2659 102 3 380 288 209 18 chr20 21770182 21770524 -44897481 - L2 LINE L2 -172 3141 2740 223 295 189 14 chr20 21770524 21770780 -44897225 - L2 LINE L2 -1011 2303 1952 1274 200 165 28 chr20 21771143 21771603 -44896402 + Charlie1b DNA MER1_type 1 523 0 1891 62 3 98 chr20 21772951 21773256 -44894749 + AluSg SINE Alu 21 296 -14 320 213 24 63 chr20 21773461 21773588 -44894417 - MLT1I LTR MaLR -7 402 281 524 289 51 16 chr20 21773596 21773830 -44894175 + L1ME LINE L1 5345 5585 -536 994 180 92 5 chr20 21773881 21774087 -44893918 + MER58A DNA MER1_type 1 224 0 266 309 53 0 chr20 21774220 21774372 -44893633 + L1ME LINE L1 5727 5886 -278 190 179 0 0 chr20 21775197 21775225 -44892780 - L2 LINE L2 -22 3291 3264 359 314 0 10 chr20 21775836 21775938 -44892067 - L2 LINE L2 -35 3278 3178 2116 131 3 3 chr20 21775950 21776248 -44891757 + AluSx SINE Alu 1 298 -14 255 327 82 25 chr20 21776967 21777126 -44890879 - MIR SINE MIR -76 186 19 1719 244 103 0 chr20 21777172 21777669 -44890336 - MER119 DNA MER1_type -33 550 3 1789 44 13 0 chr20 21778200 21778427 -44889578 + L1PA7 LINE L1 5925 6154 0 301 145 0 29 chr20 21778590 21778659 -44889346 + (CATATA)n Simple_repeat Simple_repeat 4 70 0 959 153 7 0 chr20 21778870 21779020 -44888985 - AluSg/x SINE Alu -25 285 135 23 0 0 0 chr20 21779081 21779104 -44888901 + AT_rich Low_complexity Low_complexity 1 23 0 464 264 87 19 chr20 21779104 21779264 -44888741 + L1ME3A LINE L1 2258 2406 -3740 2338 101 0 0 chr20 21779264 21779561 -44888444 + AluSx SINE Alu 3 299 -13 464 264 87 19 chr20 21779561 21779710 -44888295 + L1ME3A LINE L1 2406 2588 -3558 272 263 79 0 chr20 21779729 21779805 -44888200 - MER58 DNA MER1_type 0 2420 134 261 0 0 0 chr20 21779809 21779838 -44888167 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1169 258 137 86 chr20 21779909 21781626 -44886379 + L1ME3A LINE L1 3474 5279 -867 366 256 137 19 chr20 21781660 21781997 -44886008 + L1ME3A LINE L1 5345 5735 -512 271 196 94 6 chr20 21782049 21782152 -44885853 + L1ME3A LINE L1 5852 5961 -201 1501 127 131 12 chr20 21783600 21783852 -44884153 + AluSx SINE Alu 24 305 -7 225 236 135 40 chr20 21785158 21785306 -44882699 - MER103 DNA DNA -3 163 2 268 236 309 39 chr20 21785593 21785771 -44882234 - MIR SINE MIR -6 256 31 2275 85 3 3 chr20 21787734 21788027 -44879978 + AluSc SINE Alu 1 293 -16 942 172 6 17 chr20 21790097 21790271 -44877734 + AluSg/x SINE Alu 139 310 0 194 61 0 30 chr20 21790739 21790772 -44877233 + (TTAAA)n Simple_repeat Simple_repeat 3 34 0 192 278 9 102 chr20 21791264 21791372 -44876633 + L2 LINE L2 3099 3196 -76 1058 263 93 36 chr20 21793767 21794288 -44873717 + L2 LINE L2 2259 2812 -502 1250 172 44 9 chr20 21794288 21794515 -44873490 - MER46A DNA MER2_type -1 235 1 1598 164 20 8 chr20 21794554 21794804 -44873201 - AluJo SINE Alu -21 291 39 580 239 15 85 chr20 21795687 21795888 -44872117 + MIR SINE MIR 74 260 -2 752 284 98 0 chr20 21796054 21796279 -44871726 + MIR SINE MIR 2 248 -14 448 220 0 0 chr20 21796391 21796482 -44871523 + MER82 DNA MER2_type 2 92 -561 206 301 159 18 chr20 21796499 21796662 -44871343 - MIR SINE MIR -57 205 20 683 192 0 8 chr20 21796757 21796882 -44871123 + MER82 DNA MER2_type 530 653 0 445 277 82 19 chr20 21796891 21797050 -44870955 - MIR SINE MIR -46 216 48 1469 170 67 0 chr20 21797117 21797429 -44870576 - MER2 DNA MER2_type 0 345 13 2352 100 3 0 chr20 21799734 21800044 -44867961 - AluSx SINE Alu -1 311 1 1252 146 95 17 chr20 21801073 21801367 -44866638 + MER33 DNA MER1_type 1 317 -7 212 273 76 0 chr20 21801449 21801515 -44866490 - MIR SINE MIR -2 260 190 206 271 85 0 chr20 21801592 21801651 -44866354 + MIR SINE MIR 197 260 -2 315 353 107 29 chr20 21801699 21801971 -44866034 + L2 LINE L2 2942 3234 -38 250 304 33 22 chr20 21802990 21803082 -44864923 + MIR SINE MIR 81 173 -89 1289 112 32 90 chr20 21803163 21803441 -44864564 - L1MC1 LINE L1 0 6333 6072 21 0 0 0 chr20 21803719 21803740 -44864265 + AT_rich Low_complexity Low_complexity 1 21 0 240 59 0 0 chr20 21803928 21803962 -44864043 + (T)n Simple_repeat Simple_repeat 1 34 0 304 296 46 9 chr20 21804129 21804237 -44863768 - L1MCa LINE L1 -4729 1400 1289 241 135 39 19 chr20 21804315 21804367 -44863638 - L1MC4 LINE L1 -1329 6713 6661 867 250 19 0 chr20 21804426 21804638 -44863367 + MER58B DNA MER1_type 126 341 0 339 268 102 0 chr20 21804640 21804767 -44863238 - L1MCa LINE L1 -4711 1418 1279 522 243 143 26 chr20 21804771 21805199 -44862806 - L1MCa LINE L1 -4870 1249 772 316 323 109 23 chr20 21805188 21805445 -44862560 - L1MCa LINE L1 -5573 546 268 * 268 258 97 0 chr20 21805962 21806055 -44861950 + MER103 DNA DNA 18 119 -47 2142 117 7 10 chr20 21806763 21807072 -44860933 + AluSx SINE Alu 1 308 -4 280 346 0 0 chr20 21807242 21807320 -44860685 + MIR SINE MIR 25 102 -160 200 308 144 0 chr20 21807340 21807444 -44860561 - MIR SINE MIR -18 244 126 1899 137 3 39 chr20 21807649 21807955 -44860050 - AluSx SINE Alu -17 295 1 247 260 0 0 chr20 21808104 21808177 -44859828 + L1ME LINE L1 5543 5615 -506 995 276 88 60 chr20 21808574 21808976 -44859029 + L1MEd LINE L1 539 929 -5467 2299 82 13 10 chr20 21808976 21809280 -44858725 + AluSc SINE Alu 1 305 -4 995 276 88 60 chr20 21809280 21809301 -44858704 + L1MEd LINE L1 929 948 -5448 1893 128 0 4 chr20 21809301 21809574 -44858431 + AluSx SINE Alu 40 311 -1 995 276 88 60 chr20 21809574 21810362 -44857643 + L1MEd LINE L1 948 1822 -4574 748 272 147 26 chr20 21810549 21811030 -44856975 + MLT1H1 LTR MaLR 26 555 0 659 294 35 22 chr20 21811124 21811596 -44856409 + L1MEd LINE L1 2120 2555 -3660 283 221 26 13 chr20 21811845 21811922 -44856083 + MER96B DNA MER1_type? 97 174 -1 244 215 6 35 chr20 21811943 21812024 -44855981 + MLT1G LTR MaLR 200 275 -280 383 196 113 0 chr20 21812195 21812292 -44855713 + MLT1G LTR MaLR 471 578 -12 358 279 98 4 chr20 21812303 21812557 -44855448 + L1MEd LINE L1 3054 3331 -2884 422 316 68 8 chr20 21812635 21812869 -44855136 - MER46C DNA MER2_type -1 337 90 485 292 139 55 chr20 21813136 21813954 -44854051 + L1MEd LINE L1 3684 4570 -1645 3395 173 71 27 chr20 21813971 21814665 -44853340 - MER44D DNA MER2_type -7 598 3 305 288 150 13 chr20 21814734 21815047 -44852958 + L1MEd LINE L1 4662 5017 -1198 407 280 155 18 chr20 21815145 21815313 -44852692 + L2 LINE L2 2263 2453 -861 6997 39 22 0 chr20 21815893 21816758 -44851247 + L1PA7 LINE L1 5269 6152 -2 274 283 85 31 chr20 21816766 21816989 -44851016 + L1ME2 LINE L1 5928 6162 -2 690 124 107 0 chr20 21817228 21817349 -44850656 + AluSc SINE Alu 1 134 -175 1645 89 0 5 chr20 21817359 21817573 -44850432 + AluSc SINE Alu 71 283 -26 490 88 75 0 chr20 21817573 21817720 -44850285 + (TA)n Simple_repeat Simple_repeat 1 158 0 2257 102 0 0 chr20 21818677 21818970 -44849035 - AluSc SINE Alu -16 293 1 461 136 87 0 chr20 21818971 21819074 -44848931 - MER113 DNA MER1_type? -321 200 89 25 31 0 0 chr20 21819189 21819221 -44848784 + AT_rich Low_complexity Low_complexity 1 32 0 2029 120 11 0 chr20 21819222 21819505 -44848500 - AluSx SINE Alu -26 286 1 254 175 0 113 chr20 21819566 21819663 -44848342 + L1ME4a LINE L1 5970 6055 -66 525 234 18 18 chr20 21820314 21820425 -44847580 - MER81 DNA DNA -3 111 1 772 158 40 128 chr20 21821934 21822030 -44845975 + LTR37B LTR ERV1 198 301 -167 2603 70 0 3 chr20 21822030 21822342 -44845663 - AluY SINE Alu 0 311 1 772 158 40 128 chr20 21822342 21822542 -44845463 + LTR37B LTR ERV1 301 468 0 1690 152 13 13 chr20 21822606 21822922 -44845083 + MER33 DNA MER1_type 1 316 -8 206 283 19 0 chr20 21823135 21823188 -44844817 + MIR SINE MIR 170 223 -39 1101 235 152 24 chr20 21826000 21826501 -44841504 + MLT1G1 LTR MaLR 1 498 -57 560 316 40 16 chr20 21826694 21826947 -44841058 + MIR SINE MIR 4 262 0 673 223 32 81 chr20 21827076 21827323 -44840682 + L1ME1 LINE L1 5731 5965 -201 5169 145 64 14 chr20 21827399 21828255 -44839750 - MER4D LTR ERV1 0 903 5 725 303 46 8 chr20 21828754 21829015 -44838990 + L1M4 LINE L1 3211 3481 -2665 377 268 66 102 chr20 21830211 21830649 -44837356 - L1MC4a LINE L1 -324 5797 5458 2464 89 0 0 chr20 21830649 21830951 -44837054 + AluSc SINE Alu 1 302 -7 377 268 66 102 chr20 21830951 21831044 -44836961 - L1MC4a LINE L1 -663 5458 5363 220 269 0 0 chr20 21831556 21831608 -44836397 + CT-rich Low_complexity Low_complexity 2 53 0 5293 103 18 8 chr20 21832662 21833429 -44834576 + L1PB2 LINE L1 5377 6151 0 351 0 0 0 chr20 21834329 21834368 -44833637 + (CTG)n Simple_repeat Simple_repeat 1 39 0 3014 41 0 3 chr20 21836096 21836440 -44831565 - L1PA4 LINE L1 -3 6152 5810 2593 111 11 0 chr20 21837066 21837416 -44830589 - L1PA16 LINE L1 -9 6157 5804 396 225 108 31 chr20 21837662 21837791 -44830214 - MIR SINE MIR -119 143 5 2712 120 8 11 chr20 21838212 21838588 -44829417 - THE1C LTR MaLR 0 375 1 320 309 24 52 chr20 21839097 21839275 -44828730 + MIR3 SINE MIR 2 144 -64 386 178 178 0 chr20 21839842 21839949 -44828056 + MER103 DNA DNA 5 130 -36 592 261 212 33 chr20 21840113 21840337 -44827668 + L2 LINE L2 2947 3242 -71 2405 101 0 0 chr20 21840337 21840643 -44827362 + AluSc SINE Alu 1 306 -3 592 261 212 33 chr20 21840643 21840725 -44827280 + L2 LINE L2 3242 3308 -5 1865 175 88 112 chr20 21841288 21841598 -44826407 - L1MC4 LINE L1 0 8042 7750 2299 76 0 14 chr20 21841598 21841909 -44826096 - AluSx SINE Alu 0 307 1 1865 175 88 112 chr20 21841909 21842180 -44825825 - L1MC4 LINE L1 -292 7750 7474 360 280 37 9 chr20 21842182 21842289 -44825716 + Charlie8 DNA MER1_type 64 173 -2244 273 197 15 45 chr20 21842452 21842518 -44825487 + MER5B DNA MER1_type 1 64 -114 4461 158 60 34 chr20 21842523 21843358 -44824647 + L1MB7 LINE L1 5254 6115 -69 2179 113 34 0 chr20 21843358 21843651 -44824354 - AluSx SINE Alu -8 304 2 4461 158 60 34 chr20 21843651 21843723 -44824282 + L1MB7 LINE L1 6115 6184 0 418 150 18 106 chr20 21843741 21843789 -44824216 + MER5B DNA MER1_type 75 126 -52 558 174 148 17 chr20 21843789 21843904 -44824101 - FLAM_C SINE Alu -3 130 1 418 150 18 106 chr20 21843904 21843968 -44824037 + MER5B DNA MER1_type 126 177 -1 31 44 0 0 chr20 21844091 21844136 -44823869 + AT_rich Low_complexity Low_complexity 1 45 0 1826 206 50 19 chr20 21844844 21845262 -44822743 - MER63B DNA MER1_type 0 436 6 22 0 0 0 chr20 21846877 21846899 -44821106 + AT_rich Low_complexity Low_complexity 1 22 0 2238 109 7 0 chr20 21848255 21848557 -44819448 + AluSx SINE Alu 1 304 -8 252 0 0 0 chr20 21849055 21849083 -44818922 + (CA)n Simple_repeat Simple_repeat 1 28 0 519 267 85 18 chr20 21849423 21849588 -44818417 + MIR SINE MIR 85 260 -2 2290 112 0 0 chr20 21850104 21850400 -44817605 - AluSq SINE Alu -17 296 1 437 289 14 14 chr20 21850405 21850547 -44817458 + MIR SINE MIR 105 246 -16 2085 131 3 13 chr20 21851541 21851855 -44816150 - AluSx SINE Alu -1 311 1 364 316 17 0 chr20 21852090 21852207 -44815798 + LTR16C LTR ERVL 373 491 0 1019 219 11 73 chr20 21852274 21852411 -44815594 + LTR16C LTR ERVL 222 337 -154 1696 44 29 0 chr20 21852411 21852617 -44815388 - L1PA13 LINE L1 -2 6161 5950 1019 219 11 73 chr20 21852617 21852739 -44815266 + LTR16C LTR ERVL 337 465 -26 279 333 101 38 chr20 21853304 21853541 -44814464 + L3 LINE CR1 1311 1562 -15 22 35 0 0 chr20 21853813 21853842 -44814163 + AT_rich Low_complexity Low_complexity 1 29 0 2040 159 46 21 chr20 21854602 21854974 -44813031 - MLT1B LTR MaLR -4 386 6 2315 67 0 27 chr20 21855552 21855850 -44812155 - AluY SINE Alu -5 306 17 450 0 0 0 chr20 21855928 21855978 -44812027 + (TA)n Simple_repeat Simple_repeat 1 50 0 233 128 26 0 chr20 21857377 21857416 -44810589 - L1M4 LINE L1 -2687 3459 3420 221 182 23 0 chr20 21857481 21857525 -44810480 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 1744 180 10 10 chr20 21857554 21857854 -44810151 - AluJo SINE Alu -12 300 1 486 274 119 86 chr20 21857919 21858547 -44809458 + L1ME4a LINE L1 5348 5996 -125 1183 265 136 35 chr20 21858645 21859166 -44808839 - L1MC4 LINE L1 -128 7914 7341 229 233 87 27 chr20 21859681 21859831 -44808174 - L1P LINE L1 -2925 3221 3063 2011 92 0 4 chr20 21859834 21860094 -44807911 - AluSq SINE Alu -13 300 42 263 134 146 61 chr20 21860119 21860201 -44807804 - MER34 LTR ERV1 -4 538 450 26 0 0 0 chr20 21860204 21860230 -44807775 + AT_rich Low_complexity Low_complexity 1 26 0 604 225 6 77 chr20 21860402 21860571 -44807434 - MER31-int LTR ERV1 -209 4727 4571 395 205 3 173 chr20 21860652 21860920 -44807085 - MER31-int LTR ERV1 -380 4556 4482 270 218 109 40 chr20 21860936 21861037 -44806968 - LTR37A LTR ERV1 -309 117 10 4993 198 71 70 chr20 21861041 21862359 -44805646 - MER31-int LTR ERV1 -687 4249 2927 180 0 0 0 chr20 21862359 21862379 -44805626 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 4993 198 71 70 chr20 21862379 21862484 -44805521 - MER31-int LTR ERV1 -2009 2927 2824 485 267 75 74 chr20 21862703 21863396 -44804609 - L1M4 LINE L1 -3127 3019 2326 2642 268 92 55 chr20 21863537 21863916 -44804089 - L1M4 LINE L1 -1119 5027 4664 1799 168 0 3 chr20 21863916 21864202 -44803803 + AluJb SINE Alu 3 287 -25 2642 268 92 55 chr20 21864202 21865196 -44802809 - L1M4 LINE L1 -1482 4664 3602 5949 135 29 13 chr20 21865257 21866576 -44801429 - L1MA4 LINE L1 -32 6268 4937 1157 201 0 0 chr20 21866577 21866791 -44801214 - L1MA4 LINE L1 -193 6107 5894 462 127 0 0 chr20 21866849 21866920 -44801085 - L1MA4 LINE L1 -2354 3792 3722 * 7586 208 22 73 chr20 21866914 21867001 -44801004 - L1 LINE L1 -1214 5114 5024 1884 132 44 0 chr20 21867001 21867318 -44800687 + AluSx SINE Alu 1 329 0 7586 208 22 73 chr20 21867318 21868262 -44799743 - L1 LINE L1 -1304 5024 4033 2248 125 0 0 chr20 21868262 21868566 -44799439 - AluSq SINE Alu -7 306 3 7586 208 22 73 chr20 21868566 21868781 -44799224 - L1 LINE L1 -2295 4033 3809 680 244 8 0 chr20 21868781 21868908 -44799097 - FLAM_A SINE Alu -14 128 1 7586 208 22 73 chr20 21868908 21869568 -44798437 - L1 LINE L1 -2519 3809 3117 3551 94 70 0 chr20 21869568 21870068 -44797937 - L1PA13 LINE L1 -1 6162 5628 7586 208 22 73 chr20 21870068 21871024 -44796981 - L1 LINE L1 -3211 3117 2114 1816 175 3 10 chr20 21871024 21871332 -44796673 - AluJb SINE Alu -2 310 5 7586 208 22 73 chr20 21871332 21871413 -44796592 - L1 LINE L1 -4214 2114 2030 21 0 0 0 chr20 21871413 21871434 -44796571 + AT_rich Low_complexity Low_complexity 1 21 0 1773 188 3 0 chr20 21871434 21871721 -44796284 - AluSx SINE Alu -24 288 1 7586 208 22 73 chr20 21871721 21871871 -44796134 - L1 LINE L1 -4003 2325 2169 * 13578 188 27 10 chr20 21871867 21872069 -44795936 - L1PB4 LINE L1 0 6872 6675 2059 121 0 10 chr20 21872069 21872382 -44795623 - AluSg SINE Alu 0 310 1 13578 188 27 10 chr20 21872382 21877641 -44790364 - L1PB4 LINE L1 -197 6675 1297 3473 212 68 15 chr20 21877651 21878642 -44789363 - L1PB4 LINE L1 -5815 1048 6 7243 162 19 56 chr20 21878660 21879935 -44788070 - L1 LINE L1 -4065 1263 1025 2313 101 0 3 chr20 21879935 21880232 -44787773 + AluSg SINE Alu 1 296 -14 7243 162 19 56 chr20 21880232 21881221 -44786784 - L1 LINE L1 -4303 1025 2 714 233 116 46 chr20 21881199 21881870 -44786135 - L1MEc LINE L1 -2612 3716 2999 * 1939 153 11 21 chr20 21881874 21882253 -44785752 - L1MB1 LINE L1 -34 6134 5760 979 270 80 20 chr20 21882294 21882986 -44785019 - L1MEc LINE L1 -3330 2885 2173 578 259 112 58 chr20 21883187 21883465 -44784540 - MLT1H LTR MaLR -147 402 110 254 300 167 82 chr20 21883899 21884796 -44783209 - L2 LINE L2 0 3272 2307 1670 194 101 44 chr20 21884832 21885306 -44782699 + MLT1D LTR MaLR 5 505 0 189 245 20 20 chr20 21885372 21885421 -44782584 + L2 LINE L2 1756 1804 -1510 20229 123 43 8 chr20 21885421 21888733 -44779272 - L1M1 LINE L1 -4136 3429 1 466 287 145 18 chr20 21888734 21889016 -44778989 - L1M4 LINE L1 -1239 4907 4590 21 0 0 0 chr20 21889037 21889058 -44778947 + AT_rich Low_complexity Low_complexity 1 21 0 585 244 23 17 chr20 21889121 21889293 -44778712 - MER69A DNA AcHobo -2 175 3 364 231 19 0 chr20 21889958 21890062 -44777943 + L1ME3 LINE L1 5943 6048 -114 27 0 0 0 chr20 21890096 21890123 -44777882 + AT_rich Low_complexity Low_complexity 1 27 0 2877 32 0 3 chr20 21890123 21890468 -44777537 - L1PA3 LINE L1 -3 6152 5809 2930 17 3 0 chr20 21890468 21890821 -44777184 + L1PA3 LINE L1 5469 5822 -333 2139 132 13 7 chr20 21890838 21891148 -44776857 - AluSx SINE Alu 0 312 1 5192 246 102 28 chr20 21893439 21895908 -44772097 + L1ME1 LINE L1 51 2689 -3526 5836 148 13 24 chr20 21896692 21898847 -44769158 - L1PB2 LINE L1 -2 6149 4027 768 205 14 29 chr20 21898988 21899258 -44768747 + L1ME1 LINE L1 2688 3826 -2389 16806 164 25 13 chr20 21899258 21901472 -44766533 + L1P5 LINE L1 1 2187 -4680 2327 98 0 13 chr20 21901472 21901779 -44766226 + AluY SINE Alu 1 303 -8 16806 164 25 13 chr20 21901779 21905960 -44762045 + L1P5 LINE L1 2187 6472 -395 812 81 40 8 chr20 21905974 21906098 -44761907 + L1PB1 LINE L1 6024 6151 0 4336 219 80 35 chr20 21906101 21907027 -44760978 + L1ME1 LINE L1 3812 4694 -1521 1694 169 11 11 chr20 21907027 21907300 -44760705 - AluSx SINE Alu -39 273 1 4336 219 80 35 chr20 21907300 21907889 -44760116 + L1ME1 LINE L1 4694 5400 -815 2558 10 0 0 chr20 21907889 21908177 -44759828 + L1PA2 LINE L1 5863 6150 -5 4336 219 80 35 chr20 21908177 21908194 -44759811 + L1ME1 LINE L1 5400 5415 -800 663 201 126 0 chr20 21908281 21908455 -44759550 + L1ME1 LINE L1 5383 5578 -657 975 271 21 27 chr20 21908458 21908834 -44759171 + L1ME1 LINE L1 5847 6220 -15 305 127 25 76 chr20 21908855 21908934 -44759071 + MADE1 DNA Mariner 6 80 0 786 248 69 45 chr20 21909009 21909255 -44758750 - MIR SINE MIR 0 262 11 519 228 93 26 chr20 21909789 21909982 -44758023 + LTR33 LTR ERVL 307 512 -9 673 267 73 14 chr20 21910761 21911049 -44756956 + LTR16C LTR ERVL 185 489 -2 257 296 53 68 chr20 21911254 21911460 -44756545 + HAL1 LINE L1 18 220 -2287 2016 195 61 2 chr20 21911829 21912285 -44755720 - MLT1D LTR MaLR 0 505 23 238 270 32 95 chr20 21912452 21912578 -44755427 + HAL1 LINE L1 1664 1781 -726 496 262 121 46 chr20 21912746 21913135 -44754870 + HAL1 LINE L1 2080 2497 -10 1654 65 0 13 chr20 21913536 21913766 -44754239 - L1PA8 LINE L1 -7 6165 5939 189 274 354 0 chr20 21914237 21914350 -44753655 + MER5A DNA MER1_type 1 153 -36 392 233 14 86 chr20 21914491 21914668 -44753337 - MLT1K LTR MaLR -18 570 409 2268 111 36 30 chr20 21914668 21915030 -44752975 - THE1B LTR MaLR 0 364 1 392 233 14 86 chr20 21915030 21915062 -44752943 - MLT1K LTR MaLR -179 409 376 1475 186 58 23 chr20 21917882 21918017 -44749988 - Charlie5 DNA MER1_type 0 2624 2495 1439 174 74 11 chr20 21918017 21918287 -44749718 - AluJo SINE Alu -23 289 3 1475 186 58 23 chr20 21918287 21918548 -44749457 - Charlie5 DNA MER1_type -129 2495 2214 338 139 0 14 chr20 21918541 21918613 -44749392 - MER3 DNA MER1_type -41 168 98 * 30 0 0 0 chr20 21919461 21919491 -44748514 + AT_rich Low_complexity Low_complexity 1 30 0 307 342 97 59 chr20 21919904 21920141 -44747864 - L2 LINE L2 -39 3233 2988 303 304 37 43 chr20 21920250 21920411 -44747594 + L1M4 LINE L1 5209 5368 -778 338 160 0 0 chr20 21920470 21920536 -44747469 + L1ME2 LINE L1 6097 6155 -9 1015 213 60 24 chr20 21920809 21921058 -44746947 - MIR SINE MIR -4 258 1 1424 236 56 11 chr20 21921336 21921785 -44746220 + Charlie4a DNA MER1_type 36 504 -4 467 264 46 32 chr20 21921840 21922078 -44745927 - MLT1J LTR MaLR -244 267 20 1840 166 7 10 chr20 21922250 21922545 -44745460 - AluJb SINE Alu -18 294 1 5529 168 45 7 chr20 21922545 21923552 -44744453 - L1MC1 LINE L1 -6 6327 5283 502 221 201 13 chr20 21925243 21925392 -44742613 + MER5A DNA MER1_type 13 189 0 2154 94 0 21 chr20 21925406 21925758 -44742247 - AluY SINE Alu 0 346 1 6512 72 32 31 chr20 21925816 21926805 -44741200 + L1PA10 LINE L1 5174 6163 -5 194 0 0 37 chr20 21926892 21926919 -44741086 + (TTTTA)n Simple_repeat Simple_repeat 3 28 0 308 293 17 17 chr20 21927220 21927336 -44740669 - MLT1L LTR MaLR -10 605 490 521 240 87 66 chr20 21927494 21927827 -44740178 - L2 LINE L2 -2 3311 2972 26 0 0 0 chr20 21928501 21928527 -44739478 + AT_rich Low_complexity Low_complexity 1 26 0 6460 163 16 3 chr20 21928972 21930123 -44737882 + L1PA13 LINE L1 4157 5321 -825 1210 74 0 0 chr20 21930125 21930274 -44737731 + AluY SINE Alu 151 299 -12 5922 92 16 0 chr20 21930275 21931093 -44736912 + L1PA13 LINE L1 5323 6153 -10 430 189 18 0 chr20 21931093 21931204 -44736801 + (TA)n Simple_repeat Simple_repeat 1 113 0 225 0 0 0 chr20 21931204 21931229 -44736776 + (CA)n Simple_repeat Simple_repeat 2 26 0 190 222 125 56 chr20 21932392 21932464 -44735541 + MER5A DNA MER1_type 7 83 -106 * 485 230 35 35 chr20 21932426 21932539 -44735466 + L2 LINE L2 3160 3272 0 180 0 0 0 chr20 21932711 21932731 -44735274 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2045 144 0 22 chr20 21933070 21933389 -44734616 - AluSx SINE Alu 0 312 1 1296 177 25 22 chr20 21933466 21933743 -44734262 - MER33 DNA MER1_type 0 324 47 842 263 88 30 chr20 21934223 21934562 -44733443 - L2 LINE L2 0 3313 2955 326 211 28 174 chr20 21934780 21934998 -44733007 - L2 LINE L2 -368 2945 2761 358 169 40 14 chr20 21935003 21935138 -44732867 + Charlie4a DNA MER1_type 239 453 -55 900 263 92 22 chr20 21935168 21935525 -44732480 - L2 LINE L2 -566 2748 2367 522 307 71 8 chr20 21935634 21935888 -44732117 - L1M4 LINE L1 -3575 2571 2302 2974 193 11 2 chr20 21935933 21936466 -44731539 - L1MB7 LINE L1 -9 6175 5638 325 204 0 0 chr20 21936815 21936869 -44731136 - MER45 DNA AcHobo 0 1581 1528 * 1625 237 70 84 chr20 21936865 21937507 -44730498 - MER45C DNA AcHobo -320 633 1 307 218 69 10 chr20 21937618 21937719 -44730286 + L1ME4a LINE L1 6006 6112 -9 836 235 50 10 chr20 21938696 21939051 -44728954 - L1ME3A LINE L1 -59 6111 5709 566 216 103 147 chr20 21939270 21939562 -44728443 + Charlie1a DNA MER1_type 5 283 -1172 2684 176 64 103 chr20 21939562 21939701 -44728304 + L1MD1 LINE L1 5451 5594 -648 2150 90 35 0 chr20 21939701 21940011 -44727994 - AluSq SINE Alu 0 313 2 2684 176 64 103 chr20 21940011 21940673 -44727332 + L1MD1 LINE L1 5594 6220 -22 502 127 13 0 chr20 21940683 21940762 -44727243 + Charlie1a DNA MER1_type 246 325 -1130 1844 156 21 0 chr20 21940764 21941078 -44726927 + AluSq SINE Alu 1 320 0 226 303 56 0 chr20 21941079 21941168 -44726837 + MIR SINE MIR 163 256 -6 343 289 72 62 chr20 21941718 21941926 -44726079 - L1ME3A LINE L1 -1166 4980 4771 23 0 0 0 chr20 21942021 21942044 -44725961 + AT_rich Low_complexity Low_complexity 1 23 0 513 260 27 0 chr20 21942231 21942381 -44725624 + LTR33 LTR ERVL 14 167 -354 351 235 143 31 chr20 21942457 21942653 -44725352 + LTR33 LTR ERVL 304 521 0 355 284 62 23 chr20 21942669 21942845 -44725160 - L1ME3A LINE L1 -1721 4425 4243 471 218 42 104 chr20 21942852 21943045 -44724960 - MLT1G1 LTR MaLR -414 181 1 764 298 57 3 chr20 21943046 21943345 -44724660 - L1ME3A LINE L1 -1957 4189 3875 298 253 134 100 chr20 21943359 21943554 -44724451 - HAL1 LINE L1 -762 1745 1558 2094 113 0 3 chr20 21943554 21943837 -44724168 - AluSx SINE Alu -25 287 6 298 253 134 100 chr20 21943837 21944504 -44723501 - HAL1 LINE L1 -949 1558 853 1935 142 10 7 chr20 21945725 21946028 -44721977 + AluSx SINE Alu 1 304 -8 282 248 261 13 chr20 21947306 21947463 -44720542 + L2 LINE L2 3082 3277 -36 329 276 24 0 chr20 21947463 21947590 -44720415 + (CA)n Simple_repeat Simple_repeat 1 130 0 273 29 0 0 chr20 21949162 21949196 -44718809 + (TTG)n Simple_repeat Simple_repeat 1 34 0 887 200 186 7 chr20 21950962 21951237 -44716768 - MER5C DNA MER1_type 0 324 1 479 237 15 22 chr20 21951237 21951372 -44716633 - L1MC5 LINE L1 -89 7872 7739 26 0 0 0 chr20 21952443 21952469 -44715536 + AT_rich Low_complexity Low_complexity 1 26 0 24 32 0 0 chr20 21953371 21953402 -44714603 + AT_rich Low_complexity Low_complexity 1 31 0 950 90 0 30 chr20 21953409 21953543 -44714462 - L1MA2 LINE L1 0 6304 6175 22 35 0 0 chr20 21954987 21955016 -44712989 + AT_rich Low_complexity Low_complexity 1 29 0 400 231 86 65 chr20 21955191 21955377 -44712628 - MIR SINE MIR -70 192 3 3043 144 58 47 chr20 21956169 21956667 -44711338 - L1MB8 LINE L1 -3 6175 5667 182 36 0 36 chr20 21956667 21956695 -44711310 + (TA)n Simple_repeat Simple_repeat 2 28 0 3043 144 58 47 chr20 21956695 21956820 -44711185 - L1MB8 LINE L1 -511 5667 5545 187 245 19 19 chr20 21958032 21958085 -44709920 - MIR SINE MIR -110 152 100 313 292 69 14 chr20 21959153 21959297 -44708708 - L1ME LINE L1 -355 5766 5615 784 168 16 8 chr20 21960772 21960897 -44707108 + FLAM_C SINE Alu 2 127 -16 205 195 0 0 chr20 21962205 21962246 -44705759 + CT-rich Low_complexity Low_complexity 1 41 0 319 306 190 16 chr20 21962735 21962993 -44705012 - L2 LINE L2 -2 3311 3009 180 0 0 0 chr20 21963827 21963847 -44704158 + (TC)n Simple_repeat Simple_repeat 1 20 0 28 61 0 0 chr20 21965734 21965783 -44702222 + AT_rich Low_complexity Low_complexity 1 49 0 220 386 14 7 chr20 21967873 21968013 -44699992 + L2 LINE L2 2925 3065 -207 2834 83 3 25 chr20 21968056 21968419 -44699586 + THE1A LTR MaLR 1 355 0 635 250 7 0 chr20 21968419 21968559 -44699446 + MLT1H LTR MaLR 409 549 0 268 370 117 0 chr20 21968560 21968714 -44699291 + L2 LINE L2 3134 3305 -8 801 220 217 31 chr20 21968878 21969233 -44698772 + LTR54 LTR ERV1 75 509 -1 392 221 11 74 chr20 21969722 21969817 -44698188 + MER21B LTR ERV1 1 89 -774 2457 175 120 39 chr20 21969980 21970597 -44697408 + MER21B LTR ERV1 143 809 -54 3329 214 32 11 chr20 21971350 21972061 -44695944 - HsTC2c DNA Tc2 -3 726 1 195 229 0 83 chr20 21974001 21974097 -44693908 - L2 LINE L2 -67 3246 3159 743 89 10 0 chr20 21974526 21974627 -44693378 + AluSp/q SINE Alu 192 293 -20 380 254 25 17 chr20 21976060 21976178 -44691827 + MLT1H LTR MaLR 35 153 -396 352 197 15 153 chr20 21976310 21976447 -44691558 + MLT1H LTR MaLR 430 547 -2 * 355 307 166 24 chr20 21976447 21976736 -44691269 - MLT1K LTR MaLR -72 516 187 267 307 0 0 chr20 21977241 21977316 -44690689 - L1MEc LINE L1 -4829 1567 1493 190 186 23 0 chr20 21977317 21977360 -44690645 + L2 LINE L2 3270 3313 0 223 286 13 39 chr20 21977645 21977722 -44690283 - L2 LINE L2 -7 3306 3232 21 0 0 0 chr20 21978334 21978355 -44689650 + AT_rich Low_complexity Low_complexity 1 21 0 1013 206 17 80 chr20 21978463 21978701 -44689304 + MER58A DNA MER1_type 1 223 -1 329 345 9 9 chr20 21978741 21978857 -44689148 + MER5A DNA MER1_type 43 158 -31 2091 128 3 10 chr20 21980471 21980783 -44687222 - AluSx SINE Alu -2 310 1 21 0 0 0 chr20 21982274 21982295 -44685710 + AT_rich Low_complexity Low_complexity 1 21 0 185 94 31 0 chr20 21982312 21982344 -44685661 + GA-rich Low_complexity Low_complexity 2 34 0 360 237 0 0 chr20 21982396 21982472 -44685533 + MER5A DNA MER1_type 15 90 -99 435 238 61 55 chr20 21983991 21984172 -44683833 - LTR16C LTR ERVL 0 491 310 520 230 54 14 chr20 21984546 21984694 -44683311 + MER5A DNA MER1_type 1 154 -35 769 162 13 13 chr20 21985241 21985395 -44682610 + MER5A DNA MER1_type 1 154 -35 342 261 14 70 chr20 21986132 21986274 -44681731 - MER5A DNA MER1_type -38 151 18 432 268 18 31 chr20 21987573 21987797 -44680208 - L1MC5 LINE L1 -279 7682 7462 32 26 0 0 chr20 21987952 21987991 -44680014 + AT_rich Low_complexity Low_complexity 1 39 0 537 244 157 28 chr20 21989429 21989646 -44678359 - MIR SINE MIR 0 262 18 190 288 114 23 chr20 21989987 21990119 -44677886 - L2 LINE L2 -909 2405 2262 336 227 209 36 chr20 21990308 21990533 -44677472 + LTR33 LTR ERVL 256 519 -2 799 223 108 52 chr20 21990677 21990964 -44677041 + MLT1J LTR MaLR 100 402 -109 21 36 0 0 chr20 21991839 21991867 -44676138 + AT_rich Low_complexity Low_complexity 1 28 0 291 313 48 29 chr20 21992415 21992575 -44675430 + MIR SINE MIR 9 179 -29 451 255 82 62 chr20 21992831 21992918 -44675087 + MIR SINE MIR 1 85 -177 2609 82 19 25 chr20 21992918 21993284 -44674721 - THE1B LTR MaLR 0 364 1 12407 81 4 6 chr20 21993284 21993362 -44674643 - THE1B-int LTR MaLR 0 1580 1503 2326 109 3 0 chr20 21993362 21993664 -44674341 - AluSq SINE Alu -10 303 1 12407 81 4 6 chr20 21993664 21995168 -44672837 - THE1B-int LTR MaLR -77 1503 1 2401 108 19 35 chr20 21995168 21995538 -44672467 - THE1B LTR MaLR 0 364 1 451 255 82 62 chr20 21995538 21995656 -44672349 + MIR SINE MIR 84 212 -50 225 333 108 10 chr20 21996943 21997045 -44670960 + MIR SINE MIR 19 130 -78 211 277 75 11 chr20 21997333 21997427 -44670578 + L2 LINE L2 2631 2730 -584 734 157 239 0 chr20 21997438 21997597 -44670408 - MER3 DNA MER1_type 0 209 13 427 287 188 81 chr20 21997629 21998071 -44669934 + L2 LINE L2 2824 3312 -1 185 292 0 0 chr20 21998603 21998651 -44669354 + MIR3 SINE MIR 158 205 -3 1549 183 0 11 chr20 21999205 21999478 -44668527 + AluJo SINE Alu 25 294 -18 836 120 0 0 chr20 22000405 22000543 -44667462 + FLAM_A SINE Alu 11 148 0 279 93 0 0 chr20 22001237 22001280 -44666725 + (CA)n Simple_repeat Simple_repeat 1 43 0 1282 134 65 9 chr20 22002381 22002597 -44665408 - MER30 DNA MER1_type 0 230 3 588 242 62 6 chr20 22002764 22002925 -44665080 - MER5B DNA MER1_type -6 172 3 184 264 38 0 chr20 22002978 22003031 -44664974 - MER5A DNA MER1_type -7 182 128 637 101 9 9 chr20 22003089 22003198 -44664807 + (TTCC)n Simple_repeat Simple_repeat 4 112 0 236 279 0 0 chr20 22003788 22003849 -44664156 - MER5A DNA MER1_type -120 69 9 1146 114 0 0 chr20 22003877 22004136 -44663869 + (TCCCC)n Simple_repeat Simple_repeat 1 259 0 481 291 22 56 chr20 22004795 22005063 -44662942 - HAL1 LINE L1 -3 2504 2246 214 371 17 9 chr20 22005385 22005501 -44662504 + L3 LINE CR1 900 1016 -561 1947 297 19 6 chr20 22005698 22006237 -44661768 + MLT1H1 LTR MaLR 10 555 0 306 0 0 0 chr20 22006328 22006362 -44661643 + (CA)n Simple_repeat Simple_repeat 1 34 0 388 321 66 64 chr20 22006948 22007260 -44660745 + HAL1b LINE L1 387 650 -698 2352 101 10 0 chr20 22007260 22007568 -44660437 + AluSx SINE Alu 1 311 -1 388 321 66 64 chr20 22007568 22007768 -44660237 + HAL1b LINE L1 650 848 -500 328 332 32 45 chr20 22008418 22008665 -44659340 + L3 LINE CR1 1202 1445 -132 344 341 29 18 chr20 22008721 22008891 -44659114 - MIR SINE MIR -59 203 32 625 231 71 53 chr20 22009046 22009173 -44658832 - MLT1J LTR MaLR -45 466 332 1868 135 9 64 chr20 22009173 22009500 -44658505 - AluJb SINE Alu -3 309 1 625 231 71 53 chr20 22009500 22009597 -44658408 - MLT1J LTR MaLR -179 332 238 250 242 0 32 chr20 22009717 22009779 -44658226 - MLT1J LTR MaLR -450 61 2 555 326 135 17 chr20 22011600 22011956 -44656049 + Charlie8 DNA MER1_type 95 492 -1925 1716 216 66 66 chr20 22012029 22012684 -44655321 + MLT1G3 LTR MaLR 1 555 0 21 36 0 0 chr20 22013273 22013301 -44654704 + AT_rich Low_complexity Low_complexity 1 28 0 40 67 0 0 chr20 22013883 22013958 -44654047 + AT_rich Low_complexity Low_complexity 1 75 0 393 270 34 25 chr20 22014071 22014244 -44653761 - L1 LINE L1 -2369 3777 3597 819 177 32 65 chr20 22014530 22014571 -44653434 - MER58A DNA MER1_type -2196 224 183 1771 150 0 0 chr20 22014571 22014824 -44653181 + AluJb SINE Alu 35 287 -25 819 177 32 65 chr20 22014824 22014968 -44653037 - MER58A DNA MER1_type -2237 183 45 261 260 0 41 chr20 22016354 22016427 -44651578 + L2 LINE L2 3202 3271 -1 495 256 177 39 chr20 22016665 22016868 -44651137 + MIR SINE MIR 23 253 -9 1485 123 139 57 chr20 22017559 22017876 -44650129 - MER61A LTR ERV1 0 343 1 270 0 0 0 chr20 22019045 22019075 -44648930 + (TA)n Simple_repeat Simple_repeat 1 30 0 229 171 0 133 chr20 22019092 22019197 -44648808 - L1MC4 LINE L1 -1339 6703 6613 21 36 0 0 chr20 22019235 22019263 -44648742 + AT_rich Low_complexity Low_complexity 1 28 0 226 182 0 0 chr20 22019274 22019318 -44648687 - L1MC4 LINE L1 -1339 6703 6660 2082 128 0 0 chr20 22019318 22019599 -44648406 - AluSx SINE Alu -31 281 1 405 234 128 48 chr20 22019751 22019939 -44648066 + MIR SINE MIR 3 205 -57 21 36 0 0 chr20 22020021 22020049 -44647956 + AT_rich Low_complexity Low_complexity 1 28 0 1730 170 34 7 chr20 22020605 22020899 -44647106 - AluSx SINE Alu -10 302 1 1594 170 11 14 chr20 22020971 22021247 -44646758 + AluJo SINE Alu 35 309 -3 32 26 0 0 chr20 22022013 22022052 -44645953 + AT_rich Low_complexity Low_complexity 1 39 0 1777 158 54 0 chr20 22022086 22022365 -44645640 + AluSx SINE Alu 1 294 -18 21 0 0 0 chr20 22022365 22022386 -44645619 + AT_rich Low_complexity Low_complexity 1 21 0 942 185 38 33 chr20 22022924 22023108 -44644897 - AluJo SINE Alu -127 185 1 222 310 0 0 chr20 22023589 22023647 -44644358 - L2 LINE L2 -43 3229 3172 2054 153 3 0 chr20 22024306 22024614 -44643391 + AluSx SINE Alu 1 309 -3 23 33 0 0 chr20 22024723 22024753 -44643252 + AT_rich Low_complexity Low_complexity 1 30 0 315 304 109 0 chr20 22024882 22025020 -44642985 + MLT1I LTR MaLR 16 168 -241 863 261 100 80 chr20 22027511 22028013 -44639992 - MLT1G3 LTR MaLR 0 595 8 186 43 0 0 chr20 22028760 22028783 -44639222 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 383 250 0 0 chr20 22028784 22028868 -44639137 - L2 LINE L2 -13 3300 3217 2545 150 9 40 chr20 22029151 22029598 -44638407 - Tigger2a DNA MER2_type -1 433 1 321 284 47 76 chr20 22029671 22029882 -44638123 + LTR33A LTR ERVL 2 206 -317 1581 224 63 27 chr20 22029942 22030389 -44637616 + MLT1C LTR MaLR 1 463 -4 1572 214 77 15 chr20 22030429 22030965 -44637040 - L1MD2 LINE L1 -428 6325 5723 * 6183 229 60 46 chr20 22030959 22032584 -44635421 - L1MD2 LINE L1 -1752 4788 3123 2136 137 0 0 chr20 22032584 22032884 -44635121 + AluSx SINE Alu 1 300 -12 6183 229 60 46 chr20 22032884 22033403 -44634602 - L1MD2 LINE L1 -3417 3123 2613 2505 204 109 12 chr20 22033405 22033974 -44634031 - MLT1E3 LTR MaLR 0 624 1 2100 253 81 55 chr20 22033974 22034178 -44633827 - L1MD2 LINE L1 -3934 2606 2409 2353 71 0 0 chr20 22034178 22034512 -44633493 - AluY SINE Alu 0 334 1 2100 253 81 55 chr20 22034512 22035512 -44632493 - L1MD2 LINE L1 -4131 2409 1369 1980 140 3 13 chr20 22035563 22035877 -44632128 + AluJb SINE Alu 1 311 -1 247 229 86 0 chr20 22036067 22036137 -44631868 - L1MD2 LINE L1 -5993 537 462 192 299 256 8 chr20 22036281 22036398 -44631607 + L2 LINE L2 3127 3272 0 21 0 0 0 chr20 22036922 22036943 -44631062 + AT_rich Low_complexity Low_complexity 1 21 0 1027 160 10 36 chr20 22037261 22037455 -44630550 + MER3 DNA MER1_type 5 193 -16 247 245 0 0 chr20 22037898 22037951 -44630054 + L2 LINE L2 3255 3307 -6 222 213 53 40 chr20 22039103 22039178 -44628827 - MIR SINE MIR -116 146 71 2171 208 61 42 chr20 22040442 22040916 -44627089 + MLT1F LTR MaLR 5 491 -51 3554 147 12 7 chr20 22040916 22041502 -44626503 - L1MC1 LINE L1 0 6333 5745 2171 208 61 42 chr20 22041502 22041551 -44626454 + MLT1F LTR MaLR 491 538 -4 420 255 99 37 chr20 22041809 22041970 -44626035 + MLT1J LTR MaLR 9 179 -332 2049 207 95 105 chr20 22042354 22042954 -44625051 - MLT1G LTR MaLR 0 590 2 2750 10 0 10 chr20 22044574 22044913 -44623092 + AluYb8 SINE Alu 1 318 0 1014 87 6 27 chr20 22045919 22046102 -44621903 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 999 109 11 6 chr20 22046107 22046225 -44621780 + (TTCC)n Simple_repeat Simple_repeat 1 294 0 999 109 11 6 chr20 22046225 22046400 -44621605 + (TTCC)n Simple_repeat Simple_repeat 3 178 0 238 211 78 70 chr20 22046524 22046652 -44621353 - L1ME4a LINE L1 -3 6118 5990 185 238 24 0 chr20 22047263 22047305 -44620700 - L2 LINE L2 -4 3268 3226 223 364 34 0 chr20 22048729 22048847 -44619158 + L3 LINE CR1 1437 1558 -19 359 327 0 0 chr20 22049330 22049440 -44618565 - MER58 DNA MER1_type -2138 282 173 1184 256 69 15 chr20 22049596 22049896 -44618109 - L1ME3A LINE L1 -281 5881 5599 6162 135 73 35 chr20 22049896 22050521 -44617484 + Tigger3b DNA MER2_type 3 603 -2425 2328 112 0 3 chr20 22050521 22050833 -44617172 - AluSx SINE Alu -1 311 1 6162 135 73 35 chr20 22050833 22051392 -44616613 + Tigger3b DNA MER2_type 603 1231 0 1184 256 69 15 chr20 22051392 22051749 -44616256 - L1ME3A LINE L1 -563 5599 5179 1474 264 100 21 chr20 22051773 22052307 -44615698 - L1ME3A LINE L1 -1441 4705 4098 2033 147 0 0 chr20 22052307 22052606 -44615399 + AluSx SINE Alu 1 299 -13 1474 264 100 21 chr20 22052606 22052794 -44615211 - L1ME3A LINE L1 -2048 4098 3926 310 319 22 15 chr20 22052804 22052939 -44615066 - HAL1b LINE L1 -759 589 454 288 0 0 0 chr20 22054200 22054232 -44613773 + (TG)n Simple_repeat Simple_repeat 1 32 0 234 0 0 0 chr20 22054231 22054257 -44613748 + (GA)n Simple_repeat Simple_repeat 1 26 0 * 283 260 20 10 chr20 22054426 22054526 -44613479 + (CA)n Simple_repeat Simple_repeat 1 101 0 383 307 7 2 chr20 22057138 22057266 -44610739 + MIR SINE MIR 20 150 -58 436 231 11 0 chr20 22058019 22058110 -44609895 - MER3 DNA MER1_type -117 92 1 202 298 48 10 chr20 22059416 22059520 -44608485 - MIR SINE MIR -70 138 31 610 288 182 28 chr20 22059688 22059918 -44608087 + Charlie7 DNA MER1_type 28 221 -2391 2032 130 38 0 chr20 22059918 22060211 -44607794 - AluSx SINE Alu -8 304 1 610 288 182 28 chr20 22060211 22060414 -44607591 + Charlie7 DNA MER1_type 221 528 -2084 280 305 42 8 chr20 22060430 22060548 -44607457 - LTR67 LTR ERVL -4 553 432 316 253 21 32 chr20 22061079 22061174 -44606831 + Charlie7 DNA MER1_type 546 639 -1973 281 179 39 51 chr20 22061190 22061268 -44606737 - MER46C DNA MER2_type 0 338 262 4478 235 74 47 chr20 22061269 22062734 -44605271 + L1MEc LINE L1 70 1573 -4823 1425 196 61 77 chr20 22062942 22063320 -44604685 + MLT1A2 LTR MaLR 1 372 -2 2507 153 30 35 chr20 22063619 22064032 -44603973 - MSTB2 LTR MaLR 0 457 45 1667 180 0 26 chr20 22064032 22064337 -44603668 + AluJb SINE Alu 4 300 -12 2507 153 30 35 chr20 22064337 22064382 -44603623 - MSTB2 LTR MaLR -412 45 1 200 57 0 29 chr20 22064446 22064481 -44603524 + (TTA)n Simple_repeat Simple_repeat 3 36 0 12547 27 0 1 chr20 22064481 22066683 -44601322 - L1PA3 LINE L1 -18 6137 3937 1071 90 0 0 chr20 22066683 22066816 -44601189 + AluSg/x SINE Alu 157 289 -23 2149 108 11 0 chr20 22066823 22067101 -44600904 - AluSx SINE Alu -31 281 1 238 367 50 0 chr20 22067102 22067222 -44600783 + MIR SINE MIR 90 215 -47 274 173 39 0 chr20 22068338 22068390 -44599615 - MLT1K LTR MaLR -1 587 534 737 231 12 0 chr20 22069117 22069286 -44598719 + HAL1 LINE L1 1422 1592 -915 2257 100 162 5 chr20 22069289 22069659 -44598346 + MSTA LTR MaLR 1 428 0 1072 231 88 63 chr20 22069689 22070247 -44597758 + L1MC5 LINE L1 7119 7690 -271 589 52 104 0 chr20 22070251 22070462 -44597543 + (TA)n Simple_repeat Simple_repeat 1 232 0 578 203 122 40 chr20 22070462 22070684 -44597321 + L1MC5 LINE L1 7678 7917 -44 502 247 161 36 chr20 22070845 22071181 -44596824 + HAL1 LINE L1 1927 2304 -203 * 558 173 0 58 chr20 22071155 22071294 -44596711 + L1MC5 LINE L1 7730 7860 -101 2169 225 23 21 chr20 22071700 22072239 -44595766 + MLT1G LTR MaLR 10 553 -2 309 336 17 9 chr20 22073259 22073375 -44594630 - Tigger8 DNA MER2_type -2 664 548 227 274 122 39 chr20 22073794 22074024 -44593981 - L1ME LINE L1 -225 5896 5648 520 247 176 57 chr20 22074208 22074907 -44593098 - L1MD2 LINE L1 -180 5941 5209 382 58 87 14 chr20 22074911 22074980 -44593025 - L1MC2 LINE L1 -7 6337 6264 383 172 0 0 chr20 22074981 22075045 -44592960 + FLAM SINE Alu 65 128 -5 4431 143 76 21 chr20 22075045 22075889 -44592116 - L1MC2 LINE L1 -67 6277 5388 23 33 0 0 chr20 22075895 22075925 -44592080 + AT_rich Low_complexity Low_complexity 1 30 0 419 228 141 0 chr20 22075927 22076019 -44591986 - FLAM_A SINE Alu -34 108 4 764 288 116 54 chr20 22076022 22077272 -44590733 - L1MC2 LINE L1 -760 5386 4060 346 103 0 0 chr20 22077669 22077727 -44590278 + Alu SINE Alu 245 302 0 263 193 0 7 chr20 22078023 22078084 -44589921 - L2 LINE L2 -365 2907 2852 1706 190 21 7 chr20 22078354 22078833 -44589172 + L1M2 LINE L1 5032 5515 -751 376 240 100 33 chr20 22078839 22078989 -44589016 + MER90 LTR ERV1 454 613 -1 378 329 19 32 chr20 22079433 22079591 -44588414 + L2 LINE L2 2634 2789 -525 1336 183 25 40 chr20 22079999 22080259 -44587746 - MER33 DNA MER1_type -2261 324 68 1870 141 3 7 chr20 22080259 22080565 -44587440 - AluSx SINE Alu -7 305 1 1336 183 25 40 chr20 22080565 22080626 -44587379 - MER33 DNA MER1_type -2517 68 8 268 216 54 68 chr20 22080652 22080726 -44587279 + MIR3 SINE MIR 115 187 -21 1376 204 33 60 chr20 22080824 22081222 -44586783 - L1MC4 LINE L1 -661 7381 6995 27 0 0 0 chr20 22081428 22081455 -44586550 + AT_rich Low_complexity Low_complexity 1 27 0 1520 159 24 30 chr20 22082549 22082844 -44585161 - AluJo SINE Alu -19 293 1 618 309 14 24 chr20 22083134 22083341 -44584664 - MIR SINE MIR 0 262 58 2127 114 0 0 chr20 22084056 22084354 -44583651 - AluSx SINE Alu -14 298 1 1111 297 104 14 chr20 22085279 22085720 -44582285 + MLT1J LTR MaLR 28 508 -3 629 289 64 0 chr20 22085803 22086007 -44581998 + MIR SINE MIR 9 225 -37 1484 156 78 21 chr20 22086286 22086568 -44581437 + AluJo SINE Alu 1 298 -14 1368 83 0 4 chr20 22087158 22087618 -44580387 + (TGGA)n Simple_repeat Simple_repeat 1 458 0 24 0 0 0 chr20 22089176 22089200 -44578805 + AT_rich Low_complexity Low_complexity 1 24 0 1728 112 0 89 chr20 22089391 22089704 -44578301 - AluJo SINE Alu -11 301 17 463 144 0 44 chr20 22090276 22090366 -44577639 + L1MC2 LINE L1 5975 6060 -284 216 344 0 0 chr20 22092719 22092780 -44575225 - MIR SINE MIR -96 166 106 2229 91 13 0 chr20 22092787 22093094 -44574911 - AluSx SINE Alu -1 311 1 5885 137 15 16 chr20 22094340 22095348 -44572657 + L1MA3 LINE L1 5293 6304 -1 1722 122 0 4 chr20 22095576 22095822 -44572183 + AluSq SINE Alu 1 245 -68 252 0 0 0 chr20 22095822 22095850 -44572155 + (T)n Simple_repeat Simple_repeat 1 28 0 817 158 0 0 chr20 22095976 22096109 -44571896 + AluSg/x SINE Alu 154 286 -23 2079 116 0 0 chr20 22096113 22096398 -44571607 + AluY SINE Alu 1 285 -26 2212 100 0 3 chr20 22096413 22096714 -44571291 + AluSq SINE Alu 1 300 -13 8244 223 51 22 chr20 22096887 22097831 -44570174 + L1M4 LINE L1 2427 3342 -2804 2238 100 0 0 chr20 22097831 22098132 -44569873 + AluSg SINE Alu 1 301 -9 8244 223 51 22 chr20 22098132 22098584 -44569421 + L1M4 LINE L1 3342 3779 -2367 1926 157 0 6 chr20 22098584 22098897 -44569108 + AluSx SINE Alu 1 311 -1 8244 223 51 22 chr20 22098897 22099360 -44568645 + L1M4 LINE L1 3779 4227 -1919 2318 169 39 10 chr20 22099360 22099774 -44568231 - MSTB LTR MaLR 0 426 1 8244 223 51 22 chr20 22099774 22100251 -44567754 + L1M4 LINE L1 4227 4834 -1312 4949 147 34 30 chr20 22100257 22100525 -44567480 + L1MB5 LINE L1 3873 4138 -2036 2150 123 0 0 chr20 22100525 22100835 -44567170 + AluSx SINE Alu 1 310 -2 4949 147 34 30 chr20 22100835 22101477 -44566528 + L1MB5 LINE L1 4138 4776 -1398 2118 93 31 3 chr20 22101477 22101766 -44566239 + AluSq SINE Alu 1 297 -16 4949 147 34 30 chr20 22101766 22102200 -44565805 + L1MB5 LINE L1 4776 5890 -284 1506 120 74 79 chr20 22102200 22102642 -44565363 - THE1C LTR MaLR 0 375 1 3012 138 9 80 chr20 22102642 22103278 -44564727 + L1MA8 LINE L1 4768 5358 -788 2928 133 67 64 chr20 22103278 22103884 -44564121 + MER6A DNA MER2_type -5 586 -19 3348 144 28 31 chr20 22103890 22104404 -44563601 + L1MA8 LINE L1 5369 5882 -409 1968 125 20 3 chr20 22104404 22104699 -44563306 + AluSx SINE Alu 1 300 -12 3348 144 28 31 chr20 22104699 22104796 -44563209 + L1MA8 LINE L1 5882 5978 -313 275 256 111 0 chr20 22108931 22109048 -44558957 + L1MC4 LINE L1 7912 8041 -1 34 0 0 0 chr20 22109265 22109299 -44558706 + AT_rich Low_complexity Low_complexity 1 34 0 2162 109 3 0 chr20 22109303 22109615 -44558390 + AluSp SINE Alu 1 313 0 1748 163 56 0 chr20 22109673 22109993 -44558012 + L1MB3 LINE L1 5844 6181 -2 329 109 18 0 chr20 22112715 22112770 -44555235 + (GA)n Simple_repeat Simple_repeat 2 57 0 202 241 12 12 chr20 22113108 22113191 -44554814 + GA-rich Low_complexity Low_complexity 2 84 0 340 299 9 46 chr20 22113218 22113538 -44554467 + GA-rich Low_complexity Low_complexity 1 307 0 * 443 294 6 40 chr20 22113420 22113597 -44554408 + G-rich Low_complexity Low_complexity 1 171 0 21 57 0 0 chr20 22114389 22114424 -44553581 + GC_rich Low_complexity Low_complexity 1 35 0 204 263 0 0 chr20 22116720 22116777 -44551228 + (CGG)n Simple_repeat Simple_repeat 2 58 0 36 70 0 0 chr20 22116828 22116899 -44551106 + GC_rich Low_complexity Low_complexity 1 71 0 38 0 0 0 chr20 22117055 22117093 -44550912 + GC_rich Low_complexity Low_complexity 1 38 0 34 0 0 0 chr20 22117257 22117291 -44550714 + GC_rich Low_complexity Low_complexity 1 34 0 25 31 0 0 chr20 22118605 22118637 -44549368 + AT_rich Low_complexity Low_complexity 1 32 0 212 218 18 36 chr20 22121822 22121877 -44546128 + MIR SINE MIR 98 151 -111 1158 213 33 0 chr20 22124936 22125147 -44542858 + MER58A DNA MER1_type 2 219 -5 1985 133 6 22 chr20 22125340 22125657 -44542348 - AluSx SINE Alu 0 312 1 1847 163 7 3 chr20 22125682 22125989 -44542016 - AluJo SINE Alu -4 308 1 1851 128 0 51 chr20 22126259 22126572 -44541433 - AluSx SINE Alu 0 312 16 296 264 208 5 chr20 22126984 22127133 -44540872 + MER5A DNA MER1_type 4 189 0 266 333 20 0 chr20 22127384 22127483 -44540522 - MIR SINE MIR -44 218 118 1293 82 0 0 chr20 22128096 22128313 -44539692 - AluSg/x SINE Alu 0 358 142 22 0 0 0 chr20 22128605 22128627 -44539378 + AT_rich Low_complexity Low_complexity 1 22 0 401 259 79 14 chr20 22128768 22128907 -44539098 + MIR SINE MIR 17 164 -98 552 270 0 22 chr20 22128913 22129050 -44538955 + LTR67 LTR ERVL 5 138 -419 426 289 42 26 chr20 22129273 22129463 -44538542 + LTR67 LTR ERVL 349 541 -16 2156 104 0 16 chr20 22129563 22129881 -44538124 - AluSq SINE Alu 0 313 1 610 214 131 52 chr20 22129929 22130373 -44537632 + MLT1G LTR MaLR 10 585 -5 1547 177 3 27 chr20 22130474 22130774 -44537231 - AluJb SINE Alu -19 293 1 190 259 165 89 chr20 22130774 22130932 -44537073 - MIR SINE MIR -58 204 35 1677 215 121 38 chr20 22131038 22131523 -44536482 - MLT1F LTR MaLR 0 590 1 392 300 65 40 chr20 22131997 22132018 -44535987 + L1MC4a LINE L1 5585 5604 -517 1719 183 28 79 chr20 22132018 22132412 -44535593 - MLT1A2 LTR MaLR 0 374 1 392 300 65 40 chr20 22132412 22132635 -44535370 + L1MC4a LINE L1 5604 5823 -298 1993 116 14 0 chr20 22132741 22133033 -44534972 - AluSx SINE Alu -16 296 1 2373 65 0 3 chr20 22135105 22135414 -44532591 + AluY SINE Alu 1 308 -3 185 300 38 50 chr20 22135448 22135528 -44532477 + MIR3 SINE MIR 78 156 -52 282 325 71 19 chr20 22136617 22136771 -44531234 + MER5A DNA MER1_type 28 189 0 1389 141 37 8 chr20 22142435 22142676 -44525329 + AluJb SINE Alu 45 292 -20 189 0 0 0 chr20 22142925 22142946 -44525059 + (A)n Simple_repeat Simple_repeat 1 21 0 351 265 12 0 chr20 22146795 22146878 -44521127 - L2 LINE L2 -25 3288 3205 604 211 53 20 chr20 22146945 22147097 -44520908 + MER106B DNA MER1_type 896 1052 -7 2177 90 13 7 chr20 22147098 22147398 -44520607 + AluSq SINE Alu 1 302 -11 28 29 0 0 chr20 22148572 22148607 -44519398 + AT_rich Low_complexity Low_complexity 1 35 0 2103 212 29 15 chr20 22148764 22149245 -44518760 + L1MB8 LINE L1 5689 6176 -2 535 277 201 51 chr20 22150783 22151338 -44516667 + L2 LINE L2 2659 3310 -3 657 183 43 86 chr20 22154156 22154342 -44513663 + MER5B DNA MER1_type 1 178 0 1581 178 0 4 chr20 22154665 22154941 -44513064 + AluJb SINE Alu 1 275 -37 312 231 83 50 chr20 22155112 22155233 -44512772 + MIR3 SINE MIR 74 198 -10 212 264 14 14 chr20 22156761 22156833 -44511172 + (TATATG)n Simple_repeat Simple_repeat 6 77 0 736 228 23 65 chr20 22161500 22161715 -44506290 - MER3 DNA MER1_type 0 209 4 237 149 21 43 chr20 22161868 22161915 -44506090 + MLT1F1 LTR MaLR 73 118 -449 817 129 0 0 chr20 22163660 22163776 -44504229 + FLAM_A SINE Alu 20 135 -7 196 175 75 0 chr20 22164064 22164104 -44503901 - MIR SINE MIR -114 148 106 * 267 307 64 36 chr20 22164069 22164209 -44503796 + MIR SINE MIR 70 213 -49 292 250 69 58 chr20 22164368 22164503 -44503502 - MIR SINE MIR -62 146 39 605 199 133 20 chr20 22165280 22165431 -44502574 - MLT1C LTR MaLR 0 467 300 535 257 78 37 chr20 22165468 22165686 -44502319 - MLT1C LTR MaLR -262 243 17 575 318 111 15 chr20 22165962 22166765 -44501240 + L1MB8 LINE L1 5031 5921 -257 1694 163 0 3 chr20 22166773 22167075 -44500930 - AluJo SINE Alu 0 301 1 333 299 82 69 chr20 22167871 22168102 -44499903 - L2 LINE L2 -2 3311 3078 4826 164 23 30 chr20 22169038 22169424 -44498581 + L1MB7 LINE L1 5188 5575 -609 2228 81 3 0 chr20 22169424 22169739 -44498266 + AluSp SINE Alu 1 316 0 4826 164 23 30 chr20 22169739 22170339 -44497666 + L1MB7 LINE L1 5575 6168 -16 1456 159 110 4 chr20 22170352 22170616 -44497389 + AluJo SINE Alu 1 292 -20 214 322 138 0 chr20 22170800 22170887 -44497118 - L2 LINE L2 -35 3237 3139 981 33 16 0 chr20 22172726 22172848 -44495157 + L1PA4 LINE L1 6032 6155 0 24 0 0 0 chr20 22172977 22173001 -44495004 + AT_rich Low_complexity Low_complexity 1 24 0 342 289 51 11 chr20 22174937 22175135 -44492870 - MIR SINE MIR -54 208 2 447 174 0 0 chr20 22176747 22176833 -44491172 + (CCCA)n Simple_repeat Simple_repeat 2 87 0 225 318 61 30 chr20 22177173 22177305 -44490700 - MIR SINE MIR -126 136 1 242 279 86 29 chr20 22178020 22178160 -44489845 + MIR3 SINE MIR 18 165 -43 287 248 163 8 chr20 22178234 22178363 -44489642 - LTR50 LTR ERVL -643 152 4 1208 130 47 0 chr20 22179667 22179859 -44488146 + L1MA7 LINE L1 6075 6275 -16 359 248 108 39 chr20 22181177 22181306 -44486699 - MIR SINE MIR -25 237 100 244 33 0 0 chr20 22181316 22181346 -44486659 - MER116 DNA Mariner -49 31 2 1693 184 3 3 chr20 22182689 22182977 -44485028 + AluJb SINE Alu 1 288 -24 297 197 167 0 chr20 22184037 22184103 -44483902 + MER116 DNA Mariner 1 77 -3 582 256 192 20 chr20 22185285 22185895 -44482110 + L2 LINE L2 2455 3224 -89 1652 187 140 16 chr20 22186065 22186509 -44481496 + Charlie4a DNA MER1_type 3 501 -7 183 339 0 0 chr20 22187091 22187156 -44480849 - MIR SINE MIR -58 150 86 2054 142 0 0 chr20 22187253 22187548 -44480457 - AluJb SINE Alu -17 295 1 446 280 190 9 chr20 22190112 22190323 -44477682 + MIR SINE MIR 1 249 -13 198 331 88 0 chr20 22191672 22191802 -44476203 + MIR SINE MIR 22 133 -75 199 209 60 45 chr20 22191869 22191936 -44476069 - L3 LINE CR1 -15 1562 1495 556 243 59 24 chr20 22191992 22192161 -44475844 + MER5B DNA MER1_type 1 175 -3 189 74 0 0 chr20 22192485 22192512 -44475493 + (CA)n Simple_repeat Simple_repeat 2 28 0 437 205 172 26 chr20 22192517 22192668 -44475337 - L1ME3A LINE L1 -50 6120 5948 466 222 52 34 chr20 22192670 22192805 -44475200 - L1ME3A LINE L1 -567 5595 5466 1860 177 96 10 chr20 22192805 22193276 -44474729 + MER44D DNA MER2_type 5 605 0 404 40 0 0 chr20 22194457 22194507 -44473498 + MADE1 DNA Mariner 31 80 0 194 323 0 32 chr20 22194582 22194644 -44473361 + MIR SINE MIR 148 207 -55 305 171 23 114 chr20 22195643 22195731 -44472274 - MER116 DNA Mariner 0 80 1 266 311 99 13 chr20 22198588 22198739 -44469266 + MIR SINE MIR 20 183 -79 976 309 94 23 chr20 22198781 22199257 -44468748 + Tigger8 DNA MER2_type 39 548 -118 22 35 0 0 chr20 22199829 22199858 -44468147 + AT_rich Low_complexity Low_complexity 1 29 0 390 225 67 33 chr20 22200957 22201077 -44466928 + MIR SINE MIR 14 137 -125 249 225 135 0 chr20 22201149 22201238 -44466767 + MIR SINE MIR 136 236 -26 281 315 65 9 chr20 22201765 22201873 -44466132 + L2 LINE L2 3159 3272 0 27 49 0 0 chr20 22202879 22202920 -44465085 + AT_rich Low_complexity Low_complexity 1 41 0 256 306 180 0 chr20 22204277 22204388 -44463617 - L2 LINE L2 -5 3267 3137 370 213 188 61 chr20 22204517 22204794 -44463211 + MLT1H1 LTR MaLR 65 376 -179 583 168 298 0 chr20 22204874 22205005 -44463000 - FAM SINE Alu -15 170 1 634 267 75 31 chr20 22205052 22205307 -44462698 + Charlie7 DNA MER1_type 61 326 -2286 849 222 0 30 chr20 22205349 22205547 -44462458 + Charlie7 DNA MER1_type 1490 1681 -931 618 270 79 4 chr20 22206184 22206425 -44461580 + Charlie7 DNA MER1_type 1761 2019 -593 509 77 83 12 chr20 22206448 22206616 -44461389 + (TA)n Simple_repeat Simple_repeat 1 180 0 707 174 0 22 chr20 22206728 22206912 -44461093 + (TA)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr20 22206921 22206943 -44461062 + AT_rich Low_complexity Low_complexity 1 22 0 1321 221 82 43 chr20 22206950 22207462 -44460543 + Charlie7 DNA MER1_type 2043 2574 -38 219 135 177 73 chr20 22208275 22208371 -44459634 - MIR SINE MIR -56 206 101 322 257 14 0 chr20 22212904 22212978 -44455027 - L2 LINE L2 -18 3295 3221 441 0 0 0 chr20 22213185 22213234 -44454771 + (CA)n Simple_repeat Simple_repeat 1 49 0 188 399 49 28 chr20 22213812 22213955 -44454050 - L3 LINE CR1 -51 1526 1381 446 256 113 95 chr20 22214155 22214429 -44453576 - Charlie8 DNA MER1_type -2138 279 1 208 310 14 0 chr20 22214432 22214503 -44453502 - L3 LINE CR1 -191 1386 1315 1218 331 132 28 chr20 22214554 22215586 -44452419 - L3 LINE CR1 -407 1170 32 288 0 0 0 chr20 22215598 22215630 -44452375 + (ATTG)n Simple_repeat Simple_repeat 1 32 0 408 20 0 0 chr20 22216977 22217026 -44450979 + (TG)n Simple_repeat Simple_repeat 2 50 0 275 236 14 0 chr20 22217136 22217208 -44450797 + L2 LINE L2 3193 3265 -7 1034 155 35 0 chr20 22218630 22218804 -44449201 - MER45 DNA AcHobo 0 1581 1402 198 0 0 0 chr20 22219450 22219472 -44448533 + (T)n Simple_repeat Simple_repeat 1 22 0 29 0 0 0 chr20 22220676 22220705 -44447300 + AT_rich Low_complexity Low_complexity 1 29 0 1008 162 52 0 chr20 22221528 22221701 -44446304 - AluJo SINE Alu -22 290 109 2156 272 143 16 chr20 22221917 22223059 -44444946 - L2 LINE L2 0 3313 2041 28 0 0 0 chr20 22223125 22223153 -44444852 + AT_rich Low_complexity Low_complexity 1 28 0 246 269 43 43 chr20 22223189 22223282 -44444723 - L2 LINE L2 -10 3303 3211 3586 241 81 53 chr20 22223282 22224710 -44443295 + L1ME3A LINE L1 3671 5144 -1002 423 0 0 0 chr20 22224710 22224757 -44443248 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 3586 241 81 53 chr20 22224757 22224827 -44443178 + L1ME3A LINE L1 5144 5211 -935 1205 304 25 9 chr20 22224828 22225268 -44442737 + L1ME3A LINE L1 5719 6165 -5 2115 267 88 58 chr20 22225271 22225422 -44442583 + L1M4 LINE L1 2584 2729 -3417 1387 185 86 40 chr20 22225422 22225626 -44442379 + MER58B DNA MER1_type 1 227 -2193 1945 145 0 7 chr20 22225626 22225923 -44442082 - AluSx SINE Alu -17 295 1 1387 185 86 40 chr20 22225923 22226043 -44441962 + MER58B DNA MER1_type 227 340 -1 2115 267 88 58 chr20 22226043 22226525 -44441480 + L1M4 LINE L1 2729 3195 -2951 2465 78 10 88 chr20 22226525 22226912 -44441093 + L1PA16 LINE L1 5808 6164 -2 2115 267 88 58 chr20 22226912 22228210 -44439795 + L1M4 LINE L1 3195 4590 -1556 195 305 110 12 chr20 22231990 22232072 -44435933 + L3 LINE CR1 1484 1573 -4 373 314 71 7 chr20 22232835 22232975 -44435030 - MIR SINE MIR -19 243 95 1524 106 35 22 chr20 22232983 22233209 -44434796 - MER30 DNA MER1_type -1 229 1 4229 222 78 80 chr20 22233260 22233893 -44434112 - L1MCb LINE L1 -3743 2830 2197 1921 166 3 3 chr20 22233893 22234194 -44433811 + AluJb SINE Alu 1 301 -11 4229 222 78 80 chr20 22234194 22235662 -44432343 - L1MCb LINE L1 -4376 2197 727 1980 152 0 10 chr20 22235662 22235965 -44432040 + AluJb SINE Alu 1 300 -12 4229 222 78 80 chr20 22235965 22236014 -44431991 - L1MCb LINE L1 -5846 727 679 1244 187 42 54 chr20 22236014 22236255 -44431750 + MER8 DNA MER2_type 2 239 0 4229 222 78 80 chr20 22236255 22236714 -44431291 - L1MCb LINE L1 -5894 679 5 356 291 161 52 chr20 22236714 22236944 -44431061 + L2 LINE L2 3058 3312 -1 26 30 0 0 chr20 22237494 22237527 -44430478 + AT_rich Low_complexity Low_complexity 1 33 0 360 111 0 0 chr20 22238887 22238950 -44429055 + (CA)n Simple_repeat Simple_repeat 2 64 0 344 340 19 0 chr20 22239117 22239223 -44428782 - MIR SINE MIR -65 143 36 477 211 0 28 chr20 22242113 22242222 -44425783 - MIR SINE MIR 0 262 157 452 301 62 48 chr20 22243884 22244093 -44423912 - MIR SINE MIR -5 257 46 39 38 0 0 chr20 22247391 22247444 -44420561 + AT_rich Low_complexity Low_complexity 1 53 0 15465 131 31 17 chr20 22247887 22250270 -44417735 - Tigger1 DNA MER2_type 0 2418 1 476 264 8 8 chr20 22250451 22250580 -44417425 - MIR SINE MIR -36 226 98 317 321 49 43 chr20 22251650 22251834 -44416171 - L1ME4a LINE L1 -1 6120 5936 287 311 19 28 chr20 22251934 22252040 -44415965 - L1ME4a LINE L1 -493 5628 5524 2063 104 0 14 chr20 22252503 22252790 -44415215 + AluSc SINE Alu 27 309 0 192 158 0 0 chr20 22252887 22252925 -44415080 + (TATG)n Simple_repeat Simple_repeat 4 41 0 400 333 68 13 chr20 22253667 22253904 -44414101 - MIR SINE MIR -11 251 2 201 284 0 45 chr20 22254316 22254383 -44413622 + L2 LINE L2 3197 3260 -12 28 0 0 0 chr20 22254708 22254736 -44413269 + AT_rich Low_complexity Low_complexity 1 28 0 398 65 0 16 chr20 22255146 22255208 -44412797 - L1MB4 LINE L1 0 6180 6120 1750 140 10 47 chr20 22255391 22255691 -44412314 - AluSx SINE Alu -23 289 1 227 29 57 0 chr20 22257726 22257761 -44410244 + (GAAAA)n Simple_repeat Simple_repeat 4 40 0 206 312 147 52 chr20 22259645 22259876 -44408129 + L2 LINE L2 2952 3204 -68 2103 108 7 3 chr20 22259944 22260240 -44407765 + AluSg SINE Alu 1 297 -13 384 22 0 0 chr20 22260260 22260305 -44407700 + (CA)n Simple_repeat Simple_repeat 2 46 0 5800 153 7 191 chr20 22261410 22263340 -44404665 + L1PA15-16 LINE L1 8 1583 -5266 * 6128 233 42 25 chr20 22263335 22264946 -44403059 + L1PBa LINE L1 2 1639 -5224 * 6210 151 28 14 chr20 22264917 22266100 -44401905 + L1PBb LINE L1 7 1201 -5003 2174 96 0 4 chr20 22266110 22266390 -44401615 - AluSc SINE Alu -30 279 1 200 263 126 42 chr20 22267199 22267294 -44400711 + MIR SINE MIR 47 149 -113 335 320 75 32 chr20 22267564 22267842 -44400163 + L2 LINE L2 1861 2150 -1164 726 207 6 65 chr20 22267912 22268081 -44399924 - FRAM SINE Alu -17 159 1 1354 158 49 20 chr20 22268091 22268338 -44399667 - L1MD2 LINE L1 -16 6343 6090 185 303 97 55 chr20 22268563 22268708 -44399297 + L2 LINE L2 3043 3193 -79 2142 249 57 22 chr20 22270165 22270763 -44397242 + L1ME3A LINE L1 5547 6165 -5 1099 193 53 0 chr20 22271516 22271760 -44396245 + L1MA4 LINE L1 6042 6298 -2 2285 75 0 0 chr20 22272012 22272291 -44395714 - AluY SINE Alu -32 279 1 216 158 0 0 chr20 22272688 22272726 -44395279 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 341 185 99 12 chr20 22273312 22273393 -44394612 - MER94 DNA DNA -46 88 1 219 259 103 17 chr20 22274786 22274844 -44393161 - MIR SINE MIR -77 185 123 471 291 22 28 chr20 22275451 22275633 -44392372 + L2 LINE L2 2881 3061 -252 187 354 47 0 chr20 22276128 22276255 -44391750 - L2 LINE L2 -349 2965 2833 1569 189 58 49 chr20 22277519 22277863 -44390142 + MER7A DNA MER2_type 1 345 -1 217 346 9 19 chr20 22278191 22278298 -44389707 + MIR SINE MIR 83 188 -74 203 351 176 0 chr20 22278765 22278930 -44389075 + MIR SINE MIR 50 243 -19 425 321 52 9 chr20 22279078 22279284 -44388721 + MIR SINE MIR 45 262 0 22 35 0 0 chr20 22280267 22280296 -44387709 + AT_rich Low_complexity Low_complexity 1 29 0 863 303 103 30 chr20 22280445 22280911 -44387094 - L2 LINE L2 -785 2529 2030 180 111 0 0 chr20 22281073 22281100 -44386905 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 638 290 125 19 chr20 22281211 22281859 -44386146 + L1M4 LINE L1 2115 2831 -3315 708 303 90 40 chr20 22281972 22282198 -44385807 + L1M4 LINE L1 3109 3322 -2824 2460 68 0 3 chr20 22282198 22282493 -44385512 + AluY SINE Alu 1 294 -17 708 303 90 40 chr20 22282493 22282969 -44385036 + L1M4 LINE L1 3322 3846 -2300 340 243 14 0 chr20 22283372 22283442 -44384563 - MER20 DNA MER1_type -147 72 2 311 247 41 35 chr20 22283443 22283613 -44384392 - L1MC4a LINE L1 -1779 6029 5859 2276 112 0 0 chr20 22285373 22285676 -44382329 + AluSx SINE Alu 1 303 -9 784 288 30 0 chr20 22285807 22286040 -44381965 - MIR SINE MIR 0 262 23 378 188 125 0 chr20 22286574 22286654 -44381351 + MER103 DNA DNA 77 166 0 879 257 131 9 chr20 22286865 22287208 -44380797 - L1ME3A LINE L1 -113 6057 5673 4355 126 39 12 chr20 22287508 22288269 -44379736 - L1MA9 LINE L1 0 6312 5531 368 100 62 25 chr20 22288784 22288864 -44379141 - L1MA9 LINE L1 0 6312 6230 21 0 0 0 chr20 22289091 22289112 -44378893 + AT_rich Low_complexity Low_complexity 1 21 0 853 146 64 23 chr20 22289113 22289260 -44378745 - L1MA9 LINE L1 -777 5535 5379 2820 174 45 8 chr20 22289260 22289789 -44378216 - MER44D DNA MER2_type -1 604 1 853 146 64 23 chr20 22289789 22289812 -44378193 - L1MA9 LINE L1 -933 5379 5358 4315 72 12 38 chr20 22289928 22291087 -44376918 + L1PA5 LINE L1 4114 5302 -852 1997 134 0 10 chr20 22291087 22291379 -44376626 - AluSc SINE Alu -19 290 2 4315 72 12 38 chr20 22291379 22291411 -44376594 + L1PA5 LINE L1 5302 5333 -821 4315 40 0 0 chr20 22291411 22291928 -44376077 + L1PA5 LINE L1 5637 6154 0 4315 72 12 38 chr20 22291928 22292175 -44375830 + L1PA5 LINE L1 5333 6154 0 230 91 0 9 chr20 22292175 22292385 -44375620 + AluY SINE Alu 1 293 -9 5336 59 3 6 chr20 22292385 22293063 -44374942 + L1PA7 LINE L1 5476 6151 -3 680 188 14 51 chr20 22293248 22293401 -44374604 - FLAM_A SINE Alu 0 148 1 1618 187 3 34 chr20 22293819 22294140 -44373865 + AluJo SINE Alu 1 311 -1 1454 174 107 10 chr20 22295781 22296080 -44371925 - MER7A DNA MER2_type 0 346 21 234 0 0 0 chr20 22296161 22296187 -44371818 + (CA)n Simple_repeat Simple_repeat 1 26 0 2066 99 10 0 chr20 22298028 22298322 -44369683 - L1PB1 LINE L1 0 6151 5855 489 292 43 32 chr20 22298340 22298621 -44369384 + MER113 DNA MER1_type? 174 457 -64 217 284 203 47 chr20 22298658 22298806 -44369199 + MIR SINE MIR 14 144 -64 306 0 0 0 chr20 22300979 22301013 -44366992 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1616 210 0 0 chr20 22301305 22301613 -44366392 + AluJo SINE Alu 1 308 0 1934 181 28 52 chr20 22302020 22302484 -44365521 - L1MB7 LINE L1 -9 6175 5723 729 156 50 25 chr20 22302488 22302648 -44365357 - L1MB7 LINE L1 -746 5434 5271 842 191 0 0 chr20 22302698 22302839 -44365166 - AluSq/x SINE Alu -171 141 1 4992 203 41 13 chr20 22302840 22304032 -44363973 - L1MB7 LINE L1 -861 5285 4060 2380 76 3 0 chr20 22305063 22305354 -44362651 + AluSx SINE Alu 1 292 -20 198 319 83 0 chr20 22305798 22305870 -44362135 - MIR3 SINE MIR -6 202 125 2329 93 0 13 chr20 22306031 22306341 -44361664 - AluSq SINE Alu -7 306 1 291 212 30 0 chr20 22307796 22307880 -44360125 + MIR SINE MIR 69 153 -63 24 0 0 0 chr20 22307955 22307979 -44360026 + AT_rich Low_complexity Low_complexity 1 24 0 933 173 104 20 chr20 22309845 22310047 -44357958 - MER20 DNA MER1_type 0 219 1 216 111 0 0 chr20 22311849 22311885 -44356120 + (CA)n Simple_repeat Simple_repeat 1 36 0 218 250 14 28 chr20 22311887 22311959 -44356046 + (CATATA)n Simple_repeat Simple_repeat 4 74 0 270 302 188 7 chr20 22312649 22312798 -44355207 - MIR3 SINE MIR -1 207 32 25 31 0 0 chr20 22313779 22313811 -44354194 + AT_rich Low_complexity Low_complexity 1 32 0 290 279 57 29 chr20 22313903 22314043 -44353962 - LTR67 LTR ERVL -6 551 408 691 270 82 10 chr20 22314662 22314858 -44353147 - MIR SINE MIR -48 214 5 201 266 93 98 chr20 22315640 22315748 -44352257 + MIR SINE MIR 37 144 -118 723 200 114 0 chr20 22315748 22315888 -44352117 + FRAM SINE Alu 2 157 -9 576 0 0 0 chr20 22315893 22315957 -44352048 + (TAAAA)n Simple_repeat Simple_repeat 4 67 0 201 266 93 98 chr20 22315957 22316056 -44351949 + MIR SINE MIR 148 249 -13 23 54 0 0 chr20 22316891 22316928 -44351077 + AT_rich Low_complexity Low_complexity 1 37 0 191 273 81 126 chr20 22318635 22318833 -44349172 + L2 LINE L2 2554 2742 -572 189 348 45 0 chr20 22319284 22319373 -44348632 - L2 LINE L2 -554 2760 2668 936 82 0 37 chr20 22320364 22320498 -44347507 + AluSg/x SINE Alu 168 296 -14 330 244 114 16 chr20 22320527 22320650 -44347355 + L1ME4a LINE L1 5975 6109 -12 2969 218 47 38 chr20 22321481 22322248 -44345757 - L1ME1 LINE L1 -5 6161 5388 272 323 62 8 chr20 22322251 22322381 -44345624 - L2 LINE L2 -282 3031 2895 831 304 163 18 chr20 22322906 22323343 -44344662 + L2 LINE L2 1815 2314 -1000 1412 279 104 14 chr20 22323489 22323998 -44344007 - HAL1 LINE L1 -1943 564 10 1613 192 70 5 chr20 22324128 22324513 -44343492 - L1MC3 LINE L1 -1 7784 7375 341 303 17 11 chr20 22324524 22324699 -44343306 - L1M4 LINE L1 -2324 3822 3647 22 0 0 0 chr20 22324832 22324854 -44343151 + AT_rich Low_complexity Low_complexity 1 22 0 301 224 104 22 chr20 22324887 22325070 -44342935 - L1M4 LINE L1 -2885 3261 3064 23 0 0 0 chr20 22326386 22326409 -44341596 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr20 22327235 22327264 -44340741 + AT_rich Low_complexity Low_complexity 1 29 0 212 361 41 16 chr20 22327323 22327445 -44340560 - L2 LINE L2 -14 3258 3134 474 305 15 15 chr20 22327704 22327973 -44340032 - L1ME1 LINE L1 -1097 5049 4781 1817 220 53 13 chr20 22328248 22328770 -44339235 + MER74A LTR ERVL 1 622 0 229 302 63 10 chr20 22329482 22329621 -44338384 + MIR3 SINE MIR 5 152 -67 188 143 143 20 chr20 22330148 22330197 -44337808 - MIR SINE MIR -71 137 83 399 21 0 0 chr20 22330197 22330245 -44337760 + (TG)n Simple_repeat Simple_repeat 2 49 0 522 304 31 16 chr20 22330268 22330462 -44337543 - MIR SINE MIR -37 225 29 1366 199 0 15 chr20 22332582 22332849 -44335156 + AluJb SINE Alu 50 312 0 467 275 84 68 chr20 22334398 22334958 -44333047 + L1ME3 LINE L1 1013 1581 -4949 324 283 56 61 chr20 22335020 22335200 -44332805 + L1ME3 LINE L1 1547 1725 -4815 1033 289 76 14 chr20 22335447 22336397 -44331608 + L1ME3 LINE L1 5275 6280 -276 21 0 0 0 chr20 22336866 22336887 -44331118 + AT_rich Low_complexity Low_complexity 1 21 0 236 287 46 23 chr20 22337789 22338005 -44330000 + L1MEd LINE L1 3648 3868 -2672 1202 147 56 8 chr20 22338023 22338274 -44329731 - L1MA8 LINE L1 -3 6288 6026 232 292 34 0 chr20 22338892 22338981 -44329024 + L2 LINE L2 2827 2918 -354 240 35 0 0 chr20 22339720 22339749 -44328256 + (CA)n Simple_repeat Simple_repeat 1 29 0 181 299 88 100 chr20 22340132 22340473 -44327532 + L2 LINE L2 2594 2930 -384 1281 202 62 0 chr20 22340981 22341238 -44326767 - AluJb SINE Alu -39 273 1 2186 109 31 0 chr20 22342760 22343054 -44324951 - AluY SINE Alu -8 303 1 1907 130 18 25 chr20 22343707 22344026 -44323979 + AluSg SINE Alu 1 317 0 929 186 129 0 chr20 22344812 22345005 -44323000 - MER20 DNA MER1_type -1 218 1 2008 120 0 0 chr20 22345630 22345904 -44322101 + AluSg SINE Alu 37 310 0 2070 139 0 0 chr20 22347746 22348034 -44319971 + AluSx SINE Alu 21 308 -4 1977 148 0 3 chr20 22348048 22348353 -44319652 + AluSx SINE Alu 1 304 -8 2433 97 0 0 chr20 22348855 22349164 -44318841 + AluSg SINE Alu 1 309 -1 290 25 0 25 chr20 22350849 22350889 -44317116 + (TG)n Simple_repeat Simple_repeat 1 39 0 641 233 116 53 chr20 22351588 22351889 -44316116 + MLT1H LTR MaLR 229 548 -1 469 234 5 151 chr20 22352530 22352608 -44315397 + MIR SINE MIR 48 89 -173 1473 117 26 30 chr20 22352608 22352839 -44315166 - MER30 DNA MER1_type 0 230 1 469 234 5 151 chr20 22352839 22352942 -44315063 + MIR SINE MIR 89 205 -57 251 298 111 47 chr20 22353748 22354264 -44313741 + L2 LINE L2 1277 1825 -1489 309 329 93 0 chr20 22354504 22354665 -44313340 + L2 LINE L2 2880 3055 -217 32 26 0 0 chr20 22355497 22355536 -44312469 + AT_rich Low_complexity Low_complexity 1 39 0 22 56 0 0 chr20 22355619 22355655 -44312350 + AT_rich Low_complexity Low_complexity 1 36 0 324 260 73 8 chr20 22356058 22356181 -44311824 + MIR3 SINE MIR 73 203 -5 426 330 17 22 chr20 22356838 22357017 -44310988 - MIR SINE MIR -74 188 11 1757 178 3 16 chr20 22357030 22357334 -44310671 - AluJo SINE Alu -12 300 1 235 244 58 47 chr20 22358964 22359050 -44308955 + L2 LINE L2 2174 2260 -1054 30 0 0 0 chr20 22359243 22359273 -44308732 + AT_rich Low_complexity Low_complexity 1 30 0 184 365 58 19 chr20 22360211 22360315 -44307690 - L3b LINE CR1 -205 1378 1271 582 270 179 50 chr20 22361440 22362103 -44305902 + L2 LINE L2 2548 3312 -1 233 238 32 16 chr20 22362103 22362166 -44305839 + GA-rich Low_complexity Low_complexity 4 67 0 2264 94 17 7 chr20 22363198 22363497 -44304508 - AluSx SINE Alu -10 302 1 21 36 0 0 chr20 22363875 22363903 -44304102 + AT_rich Low_complexity Low_complexity 1 28 0 1045 180 50 0 chr20 22365993 22366193 -44301812 - MER6B DNA MER2_type 0 210 1 194 239 106 80 chr20 22366708 22366821 -44301184 - MIR3 SINE MIR -25 183 85 29 0 0 0 chr20 22367511 22367540 -44300465 + AT_rich Low_complexity Low_complexity 1 29 0 209 307 0 80 chr20 22367619 22367707 -44300298 + L2 LINE L2 3192 3272 0 2401 100 0 0 chr20 22368896 22369206 -44298799 + AluSg SINE Alu 1 310 0 489 252 8 0 chr20 22369379 22369498 -44298507 - MER63 DNA MER1_type -273 789 44 273 304 0 0 chr20 22369498 22369577 -44298428 + T-rich Low_complexity Low_complexity 1 79 0 225 253 111 61 chr20 22369871 22369970 -44298035 - MIR SINE MIR -121 141 38 581 297 102 24 chr20 22370133 22370752 -44297253 + L1MEc LINE L1 1075 1741 -4655 598 269 67 41 chr20 22371143 22371607 -44296398 + L1MEc LINE L1 2182 2657 -3558 501 219 57 57 chr20 22371631 22371841 -44296164 - L1MEd LINE L1 -5006 1113 904 1100 265 95 27 chr20 22372002 22372081 -44295924 + HAL1b LINE L1 467 539 -809 2289 117 0 3 chr20 22372081 22372389 -44295616 + AluSx SINE Alu 2 308 -4 1100 265 95 27 chr20 22372389 22372897 -44295108 + HAL1b LINE L1 539 1094 -254 305 333 5 53 chr20 22373079 22373268 -44294737 + (CCTG)n Simple_repeat Simple_repeat 1 180 0 610 254 26 71 chr20 22373539 22373807 -44294198 + MER112 DNA MER1_type 1 256 -4 815 226 16 5 chr20 22374793 22374983 -44293022 + MER58A DNA MER1_type 33 224 0 1046 188 14 40 chr20 22376568 22376791 -44291214 - MER20 DNA MER1_type -2 217 1 342 0 0 0 chr20 22377356 22377394 -44290611 + (CA)n Simple_repeat Simple_repeat 2 39 0 801 286 83 20 chr20 22378981 22379331 -44288674 + MLT1H1 LTR MaLR 3 374 -181 2159 184 105 4 chr20 22379336 22379793 -44288212 + MLT1D LTR MaLR 3 505 0 2367 53 0 20 chr20 22380063 22380365 -44287640 - AluY SINE Alu -15 296 1 342 290 125 40 chr20 22380707 22380907 -44287098 - L1MC/D LINE L1 -2337 5471 5255 2300 115 0 3 chr20 22381047 22381470 -44286535 - AluSx SINE Alu 0 422 1 2009 91 34 0 chr20 22381548 22381813 -44286192 - AluY SINE Alu -37 274 1 375 23 0 0 chr20 22384575 22384619 -44283386 + (TG)n Simple_repeat Simple_repeat 2 45 0 240 323 0 0 chr20 22386598 22386660 -44281345 - MIR SINE MIR -108 100 39 913 291 29 0 chr20 22389070 22389314 -44278691 + MIR SINE MIR 2 252 -10 22 0 0 0 chr20 22389902 22389924 -44278081 + AT_rich Low_complexity Low_complexity 1 22 0 651 60 0 0 chr20 22390139 22390223 -44277782 + (GGGGA)n Simple_repeat Simple_repeat 4 87 0 2228 97 0 45 chr20 22390236 22390546 -44277459 - AluSx SINE Alu -16 296 1 241 261 152 48 chr20 22391176 22391341 -44276664 - MIR3 SINE MIR -5 203 22 2414 94 3 0 chr20 22393142 22393449 -44274556 - AluSx SINE Alu -4 308 1 275 54 0 0 chr20 22393610 22393647 -44274358 + MLT1E2 LTR MaLR 590 626 0 939 251 39 4 chr20 22393704 22393935 -44274070 + MIR SINE MIR 2 240 -22 29 0 0 0 chr20 22393979 22394008 -44273997 + AT_rich Low_complexity Low_complexity 1 29 0 1662 123 112 8 chr20 22394091 22394359 -44273646 - AluSc SINE Alu -13 296 1 486 179 135 43 chr20 22394692 22394899 -44273106 - MER96B DNA MER1_type? 0 417 192 21 71 0 0 chr20 22395011 22395053 -44272952 + AT_rich Low_complexity Low_complexity 1 42 0 284 306 67 0 chr20 22395364 22395498 -44272507 + L1MCc LINE L1 993 1135 -5288 1070 183 68 0 chr20 22395502 22395754 -44272251 + L1ME1 LINE L1 4978 5246 -900 2731 208 89 33 chr20 22395764 22396551 -44271454 + L1ME1 LINE L1 5318 6148 -18 25 31 0 0 chr20 22396565 22396597 -44271408 + AT_rich Low_complexity Low_complexity 1 32 0 278 228 55 170 chr20 22398912 22399294 -44268711 + MER46C DNA MER2_type 1 338 0 26 30 0 0 chr20 22399961 22399994 -44268011 + AT_rich Low_complexity Low_complexity 1 33 0 287 292 150 8 chr20 22400292 22400412 -44267593 + L2 LINE L2 2934 3070 -202 2489 76 3 16 chr20 22400945 22401261 -44266744 + AluSx SINE Alu 1 312 0 498 230 10 0 chr20 22401273 22401373 -44266632 - MER5A DNA MER1_type -86 103 3 22 0 0 0 chr20 22401919 22401941 -44266064 + AT_rich Low_complexity Low_complexity 1 22 0 3644 128 9 24 chr20 22402177 22402230 -44265775 - L1MA7 LINE L1 -334 5957 5905 2165 119 0 3 chr20 22402230 22402525 -44265480 - AluSx SINE Alu -18 294 1 3644 128 9 24 chr20 22402525 22403106 -44264899 - L1MA7 LINE L1 -386 5905 5332 28 0 0 0 chr20 22403257 22403285 -44264720 + AT_rich Low_complexity Low_complexity 1 28 0 30 0 0 0 chr20 22403351 22403381 -44264624 + AT_rich Low_complexity Low_complexity 1 30 0 295 322 124 33 chr20 22403419 22403661 -44264344 - L2 LINE L2 -190 3082 2819 23 0 0 0 chr20 22407695 22407718 -44260287 + AT_rich Low_complexity Low_complexity 1 23 0 1853 131 71 14 chr20 22407997 22408280 -44259725 + AluSx SINE Alu 1 299 -13 26 0 0 0 chr20 22409080 22409106 -44258899 + AT_rich Low_complexity Low_complexity 1 26 0 2155 134 0 3 chr20 22409189 22409495 -44258510 - AluSx SINE Alu -7 305 1 390 309 207 17 chr20 22410686 22411116 -44256889 - L2 LINE L2 -1 3271 2752 571 163 0 0 chr20 22411336 22411428 -44256577 - Tigger7 DNA MER2_type 0 2587 2496 * 3032 139 13 50 chr20 22411427 22411640 -44256365 - Tigger7 DNA MER2_type -212 521 302 2088 132 0 0 chr20 22411640 22411927 -44256078 - AluSx SINE Alu -25 287 1 3032 139 13 50 chr20 22411927 22412254 -44255751 - Tigger7 DNA MER2_type -431 302 1 22 0 0 0 chr20 22413117 22413139 -44254866 + AT_rich Low_complexity Low_complexity 1 22 0 181 160 20 20 chr20 22414929 22414979 -44253026 + GA-rich Low_complexity Low_complexity 2 51 0 232 35 0 0 chr20 22416184 22416213 -44251792 + Charlie5 DNA MER1_type 6 34 -2578 1710 120 0 0 chr20 22416213 22416465 -44251540 + AluSx SINE Alu 58 309 0 1583 197 76 63 chr20 22417343 22417870 -44250135 + MER74A LTR ERVL 1 534 -24 424 254 42 34 chr20 22418145 22418263 -44249742 + L2 LINE L2 3195 3313 0 476 318 65 30 chr20 22418343 22418544 -44249461 + MIR SINE MIR 8 215 -47 2280 105 0 7 chr20 22418701 22419006 -44248999 + AluSx SINE Alu 1 303 -9 518 275 71 62 chr20 22420305 22420868 -44247137 + L1MC/D LINE L1 690 1257 -4862 2336 97 0 7 chr20 22420937 22421247 -44246758 + AluY SINE Alu 1 308 -3 24 32 0 0 chr20 22421247 22421278 -44246727 + AT_rich Low_complexity Low_complexity 1 31 0 228 163 0 0 chr20 22421382 22421425 -44246580 + (CTA)n Simple_repeat Simple_repeat 1 43 0 579 273 46 85 chr20 22421571 22421937 -44246068 + L1MC/D LINE L1 3383 3734 -2395 1649 159 28 28 chr20 22421941 22422263 -44245742 + AluJo SINE Alu 1 322 0 340 233 95 50 chr20 22422268 22422551 -44245454 + L1MC/D LINE L1 3817 4112 -2017 356 338 14 0 chr20 22422686 22422828 -44245177 + L1ME3A LINE L1 5807 5950 -220 21 36 0 0 chr20 22423809 22423837 -44244168 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 22423914 22423937 -44244068 + AT_rich Low_complexity Low_complexity 1 23 0 255 286 43 50 chr20 22423966 22424127 -44243878 + L1MC/D LINE L1 5544 5703 -2088 183 254 0 36 chr20 22424492 22424547 -44243458 + MIR SINE MIR 36 88 -174 181 261 109 0 chr20 22424810 22424856 -44243149 - MIR SINE MIR -29 233 183 799 188 71 0 chr20 22424858 22425028 -44242977 - MER58A DNA MER1_type -1 223 42 189 0 0 0 chr20 22425083 22425104 -44242901 + (TTCA)n Simple_repeat Simple_repeat 3 23 0 1038 254 99 66 chr20 22425105 22425667 -44242338 - L2 LINE L2 -12 3301 2648 2600 57 0 10 chr20 22425667 22425981 -44242024 - AluY SINE Alu 0 311 1 1038 254 99 66 chr20 22425981 22426225 -44241780 - L2 LINE L2 -665 2648 2414 328 339 135 14 chr20 22427138 22427486 -44240519 + L2 LINE L2 2258 2647 -667 187 294 44 15 chr20 22428017 22428085 -44239920 - L2 LINE L2 -11 3302 3233 238 248 115 18 chr20 22428098 22428211 -44239794 - MIR SINE MIR -126 136 13 812 181 13 27 chr20 22429744 22429893 -44238112 + FRAM SINE Alu 1 146 -30 203 59 0 29 chr20 22429896 22429930 -44238075 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 205 194 0 0 chr20 22430700 22430736 -44237269 - L2 LINE L2 -86 3186 3151 184 365 0 0 chr20 22430731 22430783 -44237222 + L2 LINE L2 3183 3234 -38 * 1019 315 92 21 chr20 22430907 22431632 -44236373 + L2 LINE L2 2208 2997 -316 1939 174 103 72 chr20 22431636 22432148 -44235857 + LTR64 LTR ERVK 1 528 -30 577 293 20 0 chr20 22432766 22432916 -44235089 + L2 LINE L2 3159 3311 -2 181 269 135 29 chr20 22433219 22433323 -44234682 - L2 LINE L2 -3 3269 3155 227 255 109 51 chr20 22433473 22433594 -44234411 - MIR SINE MIR -66 196 70 534 216 119 67 chr20 22434181 22434299 -44233706 + MIR SINE MIR 16 149 -113 2099 108 49 0 chr20 22434299 22434585 -44233420 + AluSx SINE Alu 1 300 -12 534 216 119 67 chr20 22434585 22434660 -44233345 + MIR SINE MIR 149 219 -43 836 97 0 0 chr20 22436248 22436361 -44231644 + AluSp/q SINE Alu 190 302 -11 2351 88 0 0 chr20 22437400 22437697 -44230308 + AluSc SINE Alu 4 300 -9 1720 303 96 30 chr20 22438460 22439431 -44228574 + L2 LINE L2 92 1126 -2188 257 204 216 0 chr20 22439606 22439694 -44228311 + L2 LINE L2 1837 1943 -1371 2249 164 105 0 chr20 22439835 22440225 -44227780 + MSTB1 LTR MaLR 1 431 -1 26 64 0 0 chr20 22440310 22440357 -44227648 + AT_rich Low_complexity Low_complexity 1 47 0 551 276 151 47 chr20 22440553 22440981 -44227024 + MLT1L LTR MaLR 104 492 -19 2071 130 3 13 chr20 22441858 22442165 -44225840 + AluJb SINE Alu 1 304 -8 643 290 95 37 chr20 22444459 22444936 -44223069 + L2 LINE L2 2665 3170 -143 898 148 0 15 chr20 22444936 22445071 -44222934 - FLAM_C SINE Alu 0 133 1 643 290 95 37 chr20 22445071 22445134 -44222871 + L2 LINE L2 3170 3228 -85 698 116 0 74 chr20 22445278 22445399 -44222606 + AluJb SINE Alu 196 307 -5 366 253 22 51 chr20 22445614 22445861 -44222144 + MLT1K LTR MaLR 134 422 -166 363 178 196 28 chr20 22445940 22446047 -44221958 + MLT1K LTR MaLR 456 580 -8 754 204 38 0 chr20 22446151 22446308 -44221697 + L1MB5 LINE L1 5971 6133 -41 806 81 0 0 chr20 22446309 22446408 -44221597 - AluSg/x SINE Alu -15 295 197 2080 110 16 44 chr20 22446416 22446735 -44221270 - AluSx SINE Alu -2 310 1 269 104 0 0 chr20 22446735 22446783 -44221222 + L1MB5 LINE L1 6127 6174 0 357 306 16 16 chr20 22446821 22446945 -44221060 - L1ME LINE L1 -468 5653 5530 5783 99 18 11 chr20 22447653 22448509 -44219496 + L1PA16 LINE L1 5303 6164 -2 226 343 0 0 chr20 22449080 22449150 -44218855 + L2 LINE L2 3243 3312 -1 * 871 235 94 4 chr20 22449136 22449367 -44218638 + MIR SINE MIR 12 262 0 2024 107 31 7 chr20 22449491 22449782 -44218223 + AluSg SINE Alu 1 298 -12 2381 101 0 0 chr20 22449794 22450102 -44217903 + AluSg SINE Alu 1 308 -2 1805 239 43 5 chr20 22450306 22450749 -44217256 - LTR16B LTR ERVL -4 460 1 1876 158 0 0 chr20 22450927 22451218 -44216787 + AluSx SINE Alu 3 293 -19 24 32 0 0 chr20 22451571 22451602 -44216403 + AT_rich Low_complexity Low_complexity 1 31 0 201 127 16 159 chr20 22452794 22452857 -44215148 + L2 LINE L2 2725 2778 -536 199 282 20 92 chr20 22452892 22453087 -44214918 + L2 LINE L2 2933 3113 -159 1585 192 20 7 chr20 22453245 22453537 -44214468 - AluJb SINE Alu -16 296 1 21 0 0 0 chr20 22453628 22453649 -44214356 + AT_rich Low_complexity Low_complexity 1 21 0 280 0 0 48 chr20 22453682 22453724 -44214281 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 2104 98 0 0 chr20 22453727 22454001 -44214004 - AluSg SINE Alu -36 274 1 243 283 195 0 chr20 22454851 22454964 -44213041 + MIR SINE MIR 57 191 -71 233 200 240 0 chr20 22455326 22455426 -44212579 + L1ME LINE L1 5604 5727 -394 206 143 0 48 chr20 22455427 22455469 -44212536 + (GGAA)n Simple_repeat Simple_repeat 1 40 0 1527 187 19 7 chr20 22456000 22456323 -44211682 + MER33 DNA MER1_type 1 319 -5 2560 108 40 3 chr20 22456366 22456717 -44211288 + THE1B LTR MaLR 1 364 0 1488 185 10 34 chr20 22456934 22457071 -44210934 + AluJb SINE Alu 1 140 -172 2212 119 0 0 chr20 22457071 22457373 -44210632 + AluSx SINE Alu 1 302 -10 1488 185 10 34 chr20 22457373 22457532 -44210473 + AluJb SINE Alu 140 290 -22 218 284 20 56 chr20 22457607 22457740 -44210265 + MIR SINE MIR 30 154 -62 417 268 33 33 chr20 22458018 22458171 -44209834 - MIR SINE MIR -65 197 45 23 0 0 0 chr20 22459824 22459847 -44208158 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chr20 22460371 22460405 -44207600 + GC_rich Low_complexity Low_complexity 1 34 0 22 0 0 0 chr20 22460528 22460550 -44207455 + GC_rich Low_complexity Low_complexity 1 22 0 279 122 0 0 chr20 22460616 22460665 -44207340 + (CCG)n Simple_repeat Simple_repeat 2 50 0 183 355 40 0 chr20 22461510 22461586 -44206419 - MIR SINE MIR -164 98 20 390 285 73 8 chr20 22461773 22461896 -44206109 + L2 LINE L2 3137 3267 -5 459 150 0 0 chr20 22462027 22462107 -44205898 + L1ME2 LINE L1 5783 5862 -302 393 314 41 0 chr20 22462423 22462544 -44205461 - L2 LINE L2 -10 3262 3137 440 183 124 183 chr20 22462973 22463195 -44204810 + L1MC4a LINE L1 5415 5648 -2160 1594 122 83 8 chr20 22463195 22463449 -44204556 - AluSx SINE Alu 0 312 40 2157 126 13 0 chr20 22463451 22463752 -44204253 - AluSx SINE Alu -7 305 1 440 183 124 183 chr20 22463752 22463799 -44204206 + L1MC4a LINE L1 5649 5671 -2137 446 202 89 65 chr20 22463845 22464013 -44203992 + L1MC4a LINE L1 6066 6237 -1571 994 240 201 52 chr20 22464101 22464539 -44203466 + MLT1D LTR MaLR 1 503 -2 830 219 251 45 chr20 22464596 22465102 -44202903 + L1MC4a LINE L1 5748 6357 -1451 1948 120 62 7 chr20 22465255 22465547 -44202458 + AluSc SINE Alu 1 308 -1 1011 205 86 52 chr20 22465601 22465616 -44202389 - L1M4 LINE L1 -1196 4950 4937 2156 121 13 0 chr20 22465616 22465923 -44202082 + AluSx SINE Alu 2 312 0 1011 205 86 52 chr20 22465923 22465963 -44202042 - L1M4 LINE L1 -1209 4937 4900 2431 61 7 0 chr20 22465963 22466258 -44201747 - AluY SINE Alu -14 297 1 1011 205 86 52 chr20 22466258 22466528 -44201477 - L1M4 LINE L1 -1246 4900 4613 281 194 236 0 chr20 22466569 22466641 -44201364 + L1MC4a LINE L1 6645 6733 -1075 794 148 0 94 chr20 22466641 22466790 -44201215 - FLAM_C SINE Alu -2 141 7 465 213 259 11 chr20 22466800 22466974 -44201031 + L1MC4 LINE L1 6812 7028 -1014 757 200 23 0 chr20 22466987 22467117 -44200888 + AluJo SINE Alu 3 135 -177 2316 82 0 30 chr20 22467176 22467480 -44200525 - AluY SINE Alu -16 295 1 1219 139 191 45 chr20 22467637 22467926 -44200079 + AluJo SINE Alu 1 312 0 185 257 122 40 chr20 22468360 22468434 -44199571 + L2 LINE L2 3234 3313 0 1729 185 3 3 chr20 22468872 22469170 -44198835 + AluJo SINE Alu 5 302 -10 1744 150 39 3 chr20 22469392 22469678 -44198327 + AluJo SINE Alu 1 296 -16 1901 151 0 16 chr20 22469940 22470245 -44197760 + AluJb SINE Alu 1 300 -12 29 0 0 25 chr20 22470638 22470657 -44197348 + AT_rich Low_complexity Low_complexity 1 19 -20 2009 109 0 0 chr20 22470657 22470913 -44197092 + AluSx SINE Alu 33 288 -24 29 0 0 25 chr20 22470913 22470933 -44197072 + AT_rich Low_complexity Low_complexity 19 39 0 24 32 0 0 chr20 22471007 22471038 -44196967 + AT_rich Low_complexity Low_complexity 1 31 0 831 264 0 0 chr20 22471313 22471476 -44196529 - FRAM SINE Alu -2 164 2 2249 111 3 0 chr20 22471660 22471966 -44196039 + AluSp SINE Alu 1 307 -6 384 216 108 9 chr20 22472933 22473044 -44194961 - LTR67 LTR ERVL 0 557 436 351 302 49 71 chr20 22474068 22474293 -44193712 - L2 LINE L2 -82 3190 2971 327 250 33 132 chr20 22474516 22474747 -44193258 + MIR SINE MIR 22 249 -13 955 180 0 12 chr20 22475061 22475228 -44192777 + FRAM SINE Alu 1 165 -11 3762 109 9 0 chr20 22475751 22476285 -44191720 + L1MA5A LINE L1 5757 6295 -2 361 219 0 0 chr20 22476288 22476352 -44191653 + L2 LINE L2 2771 2834 -480 1055 179 14 29 chr20 22476390 22476597 -44191408 - AluJo SINE Alu -13 299 96 205 156 44 0 chr20 22477073 22477118 -44190887 + T-rich Low_complexity Low_complexity 4 50 0 1159 259 75 52 chr20 22477151 22477675 -44190330 - MLT1G1 LTR MaLR 0 595 20 1275 119 5 16 chr20 22478034 22478219 -44189786 + AluSg/x SINE Alu 110 292 -18 644 202 0 0 chr20 22478230 22478339 -44189666 + AluJo/FLAM SINE Alu 2 110 -202 373 206 0 0 chr20 22478341 22478404 -44189601 + AluJ/FRAM SINE Alu 226 288 -14 903 196 6 12 chr20 22478683 22478846 -44189159 + FRAM SINE Alu 1 159 -17 2251 115 3 0 chr20 22478929 22479224 -44188781 - AluSx SINE Alu -16 296 1 344 210 10 70 chr20 22480906 22481006 -44186999 - MER96 DNA MER1_type? 0 175 82 1960 159 3 0 chr20 22481211 22481506 -44186499 + AluJo SINE Alu 1 296 -16 354 212 7 95 chr20 22481630 22481656 -44186349 - MLT1K LTR MaLR -2 586 559 1962 134 3 23 chr20 22481656 22481961 -44186044 + AluSx SINE Alu 10 308 -4 354 212 7 95 chr20 22481961 22482071 -44185934 - MLT1K LTR MaLR -29 559 462 1092 137 47 26 chr20 22483304 22483537 -44184468 + L1MA7 LINE L1 6053 6290 -1 21 0 0 0 chr20 22483537 22483558 -44184447 + AT_rich Low_complexity Low_complexity 1 21 0 306 242 145 98 chr20 22483703 22484274 -44183731 + L1ME4a LINE L1 5524 6121 0 1153 264 67 23 chr20 22484984 22485370 -44182635 - LTR16C LTR ERVL 0 491 89 1884 154 3 19 chr20 22485874 22486185 -44181820 - AluJo SINE Alu -6 306 1 541 240 183 19 chr20 22486188 22486306 -44181699 - L1MD3 LINE L1 -804 7191 7094 189 74 0 0 chr20 22486306 22486333 -44181672 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 541 240 183 19 chr20 22486333 22486422 -44181583 - L1MD3 LINE L1 -901 7094 6950 2150 159 0 0 chr20 22486446 22486766 -44181239 - 7SLRNA srpRNA srpRNA 0 320 1 2327 83 105 0 chr20 22486799 22486922 -44181083 + MER41-int LTR ERV1 2637 2746 -3200 207 0 0 0 chr20 22486922 22486945 -44181060 + (TCTG)n Simple_repeat Simple_repeat 2 24 0 2327 83 105 0 chr20 22486945 22487172 -44180833 + MER41-int LTR ERV1 2746 3024 -2922 6363 69 41 5 chr20 22487181 22488323 -44179682 + L1PB1 LINE L1 4970 6142 -9 318 266 86 8 chr20 22489001 22489129 -44178876 + MIR SINE MIR 10 147 -115 578 240 179 68 chr20 22489159 22489568 -44178437 + LTR33 LTR ERVL 1 454 -67 2321 102 3 0 chr20 22490469 22490772 -44177233 + AluSx SINE Alu 3 306 -6 22 0 0 0 chr20 22491080 22491102 -44176903 + AT_rich Low_complexity Low_complexity 1 22 0 191 282 48 58 chr20 22491407 22491510 -44176495 + MIR SINE MIR 53 154 -108 2585 151 21 5 chr20 22492786 22493211 -44174794 + MSTB1 LTR MaLR 1 432 0 863 197 33 61 chr20 22493600 22493813 -44174192 - LTR16C LTR ERVL -27 464 258 219 259 62 25 chr20 22493824 22493905 -44174100 + MIR SINE MIR 160 243 -19 711 169 40 0 chr20 22494384 22494508 -44173497 + FRAM SINE Alu 9 137 -39 1212 256 99 27 chr20 22496684 22496834 -44171171 + MLT1G1 LTR MaLR 76 214 -381 3486 115 8 2 chr20 22496834 22497328 -44170677 + LOR1a LTR ERV1 1 497 0 1212 256 99 27 chr20 22497328 22497662 -44170343 + MLT1G1 LTR MaLR 214 595 0 40 31 0 15 chr20 22498200 22498247 -44169758 + AT_rich Low_complexity Low_complexity 1 48 -16 2131 127 3 0 chr20 22498247 22498539 -44169466 + AluSx SINE Alu 1 293 -19 40 31 0 15 chr20 22498539 22498556 -44169449 + AT_rich Low_complexity Low_complexity 48 64 0 686 156 37 0 chr20 22498556 22498665 -44169340 - AluJb SINE Alu -189 123 11 219 288 19 100 chr20 22499600 22499760 -44168245 + MIR SINE MIR 70 216 -46 215 220 0 20 chr20 22500021 22500071 -44167934 + GA-rich Low_complexity Low_complexity 1 49 0 390 210 74 68 chr20 22500218 22500395 -44167610 - MIR SINE MIR -62 146 16 217 245 179 9 chr20 22501413 22501519 -44166486 + MIR SINE MIR 35 158 -104 * 1949 289 171 15 chr20 22501514 22502476 -44165529 + L2 LINE L2 906 2017 -1297 1181 215 130 106 chr20 22502476 22503044 -44164961 - MLT1G1 LTR MaLR 0 595 14 2196 100 0 7 chr20 22503051 22503340 -44164665 + AluSq SINE Alu 17 303 -10 1246 268 95 10 chr20 22503372 22503868 -44164137 + L2 LINE L2 2065 2602 -712 2121 129 0 7 chr20 22504182 22504484 -44163521 - AluSg SINE Alu -10 300 1 604 264 50 81 chr20 22505756 22505797 -44162208 - LTR16A1 LTR ERVL 0 457 416 1403 162 6 105 chr20 22505797 22506130 -44161875 - AluY SINE Alu -11 300 1 604 264 50 81 chr20 22506130 22506384 -44161621 - LTR16A1 LTR ERVL -41 416 182 2318 98 7 0 chr20 22506583 22506880 -44161125 + AluSg SINE Alu 1 299 -11 1940 168 0 0 chr20 22507050 22507359 -44160646 - AluSx SINE Alu -3 309 1 1965 175 0 0 chr20 22508089 22508398 -44159607 + AluSx SINE Alu 1 309 -3 657 248 115 13 chr20 22508651 22508914 -44159091 - L1ME2 LINE L1 -70 6094 5796 264 284 30 0 chr20 22509807 22509874 -44158131 - L1ME2 LINE L1 -516 5654 5586 231 299 42 0 chr20 22510361 22510480 -44157525 - MIR SINE MIR -23 185 63 834 268 154 22 chr20 22510583 22510998 -44157007 + LTR33 LTR ERVL 44 513 -8 1661 224 128 17 chr20 22511155 22511797 -44156208 + L1ME3A LINE L1 5368 6111 -59 1416 167 7 43 chr20 22511801 22512077 -44155928 - AluJo SINE Alu -9 303 38 296 209 11 44 chr20 22514411 22514502 -44153503 - L1ME LINE L1 -303 5818 5731 4252 91 1 59 chr20 22515086 22515542 -44152463 - MER4B LTR ERV1 0 610 200 2186 109 0 3 chr20 22515542 22515826 -44152179 - AluSx SINE Alu -28 284 2 4252 91 1 59 chr20 22515826 22516016 -44151989 - MER4B LTR ERV1 -410 200 1 320 294 99 14 chr20 22516077 22516298 -44151707 + L2 LINE L2 2895 3134 -179 7365 137 70 116 chr20 22516300 22518079 -44149926 + pTR5 LTR ERV1 743 2438 0 285 335 28 33 chr20 22518080 22518262 -44149743 + L2 LINE L2 3130 3310 -3 261 83 0 0 chr20 22518375 22518411 -44149594 + (TCCCC)n Simple_repeat Simple_repeat 1 36 0 1598 185 34 0 chr20 22518421 22518686 -44149319 - AluJb SINE Alu -38 274 1 404 300 31 0 chr20 22519317 22519447 -44148558 + LTR16C LTR ERVL 152 285 -206 2386 86 0 3 chr20 22519659 22519961 -44148044 - AluY SINE Alu -10 301 1 2127 191 57 7 chr20 22520082 22520521 -44147484 - LOR1b LTR ERV1 0 461 1 239 29 147 0 chr20 22521207 22521241 -44146764 - U2 snRNA snRNA -136 52 14 650 279 98 17 chr20 22521381 22521668 -44146337 + LTR16C LTR ERVL 181 490 -1 1893 109 60 8 chr20 22521750 22522045 -44145960 - AluSc SINE Alu 0 309 1 531 221 12 2 chr20 22522601 22522735 -44145270 + MLT1H LTR MaLR 1 174 -375 1020 204 55 68 chr20 22522749 22523058 -44144947 - MLT1C LTR MaLR -129 338 34 1570 118 4 9 chr20 22523157 22523385 -44144620 + AluJb SINE Alu 85 311 -1 2914 214 55 45 chr20 22523466 22523495 -44144510 - L1M4 LINE L1 -1364 4782 4755 2022 123 0 60 chr20 22523495 22523813 -44144192 - AluSq SINE Alu -14 299 1 2914 214 55 45 chr20 22523813 22524578 -44143427 - L1M4 LINE L1 -1391 4755 3980 2124 131 0 0 chr20 22524587 22524885 -44143120 - AluSq SINE Alu -15 298 1 1505 154 9 109 chr20 22526251 22526581 -44141424 + AluJo SINE Alu 2 298 -4 407 297 166 4 chr20 22526683 22526912 -44141093 + L1ME3A LINE L1 5459 5724 -446 1491 170 207 11 chr20 22526918 22527271 -44140734 + MER39 LTR ERV1 4 425 -282 24 96 0 0 chr20 22527271 22527344 -44140661 + AT_rich Low_complexity Low_complexity 1 73 0 2050 115 7 3 chr20 22527356 22527642 -44140363 + AluSx SINE Alu 24 310 -2 1181 165 35 89 chr20 22527673 22527989 -44140016 + MER39 LTR ERV1 409 707 0 410 214 0 51 chr20 22527989 22528087 -44139918 + L1ME3A LINE L1 5723 5815 -355 237 237 17 0 chr20 22528087 22528146 -44139859 + L1ME3A LINE L1 6106 6165 -5 277 231 26 51 chr20 22528878 22528995 -44139010 - L1MA10 LINE L1 -7 6327 6214 1451 178 3 68 chr20 22529463 22529800 -44138205 - MLT1B LTR MaLR -70 320 6 571 291 118 63 chr20 22530749 22531220 -44136785 + Charlie8 DNA MER1_type 1 485 -1932 288 111 0 0 chr20 22532315 22532360 -44135645 + (TG)n Simple_repeat Simple_repeat 1 45 0 871 223 100 76 chr20 22532456 22532666 -44135339 - L1MC5 LINE L1 -41 7920 7717 1942 137 0 0 chr20 22532666 22533007 -44134998 - AluSx SINE Alu 0 341 1 871 223 100 76 chr20 22533007 22533253 -44134752 - L1MC5 LINE L1 -244 7717 7452 1042 273 129 27 chr20 22533582 22534070 -44133935 + MLT1H LTR MaLR 12 549 0 192 97 0 0 chr20 22534097 22534128 -44133877 + (CA)n Simple_repeat Simple_repeat 1 31 0 485 330 70 13 chr20 22534583 22534813 -44133192 - MIR SINE MIR 0 262 20 21 0 0 0 chr20 22534826 22534847 -44133158 + AT_rich Low_complexity Low_complexity 1 21 0 988 268 90 38 chr20 22535107 22535507 -44132498 + LTR16C LTR ERVL 67 487 -4 210 236 90 67 chr20 22535521 22535610 -44132395 + L2 LINE L2 2422 2512 -802 298 267 0 33 chr20 22535767 22535857 -44132148 - MIR SINE MIR 0 262 176 1951 213 56 11 chr20 22536040 22536501 -44131504 + L1MC3 LINE L1 6144 6625 -1160 1741 156 38 63 chr20 22536504 22536851 -44131154 - MER7A DNA MER2_type -1 345 10 5322 198 20 19 chr20 22536853 22537978 -44130027 + L1MC3 LINE L1 6642 7768 -17 2237 102 0 6 chr20 22537987 22538335 -44129670 + AluSx SINE Alu 1 312 0 2295 75 0 3 chr20 22539116 22539421 -44128584 + AluY SINE Alu 1 304 -7 1327 176 13 63 chr20 22539434 22539735 -44128270 + AluJo SINE Alu 1 286 -16 343 242 76 45 chr20 22539890 22540022 -44127983 + LTR16C LTR ERVL 72 207 -284 446 241 53 10 chr20 22540082 22540269 -44127736 + LTR16A1 LTR ERVL 298 457 0 249 276 11 23 chr20 22540451 22540539 -44127466 + LTR16B LTR ERVL 372 444 -6 186 43 0 0 chr20 22540899 22540922 -44127083 + (TC)n Simple_repeat Simple_repeat 2 24 0 1959 108 4 0 chr20 22540931 22541210 -44126795 - AluSx SINE Alu -32 280 1 1062 187 39 10 chr20 22541409 22541612 -44126393 - MER20 DNA MER1_type -4 215 7 629 233 190 5 chr20 22542053 22542237 -44125768 + MIR SINE MIR 31 255 -7 831 219 26 0 chr20 22542602 22542757 -44125248 + FRAM SINE Alu 1 157 -19 1995 120 17 0 chr20 22542777 22543076 -44124929 + AluSx SINE Alu 1 304 -8 421 202 17 135 chr20 22543088 22543266 -44124739 + MIR SINE MIR 106 262 0 586 277 18 6 chr20 22543326 22543492 -44124513 - MER20 DNA MER1_type -51 168 1 2082 118 0 0 chr20 22543969 22544258 -44123747 - AluSx SINE Alu -21 291 3 326 263 228 9 chr20 22544429 22544543 -44123462 - MER5A DNA MER1_type -31 158 20 321 26 0 0 chr20 22544674 22544712 -44123293 + (TG)n Simple_repeat Simple_repeat 2 39 0 221 235 118 13 chr20 22545674 22545765 -44122240 + MIR SINE MIR 38 136 -72 1977 216 78 33 chr20 22545977 22546675 -44121330 - L1ME2 LINE L1 -33 6131 5349 1684 137 13 48 chr20 22546675 22546988 -44121017 + AluJo SINE Alu 1 302 -10 1977 216 78 33 chr20 22546988 22547126 -44120879 - L1ME2 LINE L1 -815 5349 5219 494 224 99 13 chr20 22547702 22547854 -44120151 - MLT1H LTR MaLR 0 549 385 566 258 167 18 chr20 22548062 22548283 -44119722 - LTR16C LTR ERVL 0 491 238 1863 126 51 3 chr20 22548636 22548929 -44119076 - AluJo SINE Alu -5 307 1 1309 186 72 4 chr20 22549826 22550089 -44117916 + AluJo SINE Alu 1 281 -31 420 20 0 0 chr20 22550090 22550139 -44117866 + (TG)n Simple_repeat Simple_repeat 1 49 0 228 306 0 0 chr20 22550271 22550333 -44117672 - L1MC/D LINE L1 -1903 5905 5844 301 143 0 86 chr20 22550351 22550421 -44117584 - MLT2C1 LTR ERVL 0 397 334 1361 227 125 36 chr20 22550442 22550882 -44117123 - MLT2B1 LTR ERVL -41 479 1 834 262 109 0 chr20 22550906 22551154 -44116851 - L1MC/D LINE L1 -2012 5796 5522 606 255 95 61 chr20 22551164 22551490 -44116515 + MLT1K LTR MaLR 183 519 -69 2026 112 7 7 chr20 22551493 22551796 -44116209 - AluJb SINE Alu -9 303 1 871 107 38 0 chr20 22552225 22552356 -44115649 - AluJo SINE Alu -176 136 1 220 233 23 0 chr20 22552686 22552729 -44115276 + MER91 DNA MER1_type 130 173 -17 886 230 78 8 chr20 22552743 22553000 -44115005 - LTR16C LTR ERVL -2 489 215 237 257 86 0 chr20 22553271 22553341 -44114664 + L2 LINE L2 3155 3230 -42 853 207 58 13 chr20 22553349 22553589 -44114416 - LTR35 LTR ERV1 -1 676 432 320 114 38 89 chr20 22553607 22553686 -44114319 - LTR43 LTR ERV1 -345 257 183 1317 192 77 0 chr20 22555763 22556071 -44111934 - AluJo SINE Alu 0 328 1 2049 133 0 3 chr20 22556764 22557065 -44110940 + AluSx SINE Alu 1 300 -12 1580 170 20 24 chr20 22557396 22557690 -44110315 - AluJo SINE Alu -16 296 4 257 264 113 28 chr20 22557948 22558054 -44109951 + MLT1J LTR MaLR 26 140 -371 3019 109 7 2 chr20 22558069 22558501 -44109504 + MER57B LTR ERV1 1 434 0 3190 108 63 24 chr20 22558623 22559244 -44108761 - LTR8A LTR ERV1 0 727 1 2533 110 11 14 chr20 22559735 22560098 -44107907 - LTR8 LTR ERV1 0 691 330 2997 145 82 36 chr20 22560098 22560649 -44107356 + LTR9 LTR ERV1 37 612 0 2059 139 0 9 chr20 22560657 22560973 -44107032 - LTR8 LTR ERV1 -376 315 3 2235 48 48 3 chr20 22561351 22561642 -44106363 - AluY SINE Alu -7 304 1 218 257 189 27 chr20 22561880 22561954 -44106051 + MIR3 SINE MIR 96 181 -27 1890 154 138 54 chr20 22562194 22562674 -44105331 + MLT2B1 LTR ERVL 1 520 0 2200 133 99 35 chr20 22562743 22563267 -44104738 + LTR35 LTR ERV1 1 618 0 4528 147 62 25 chr20 22563508 22564378 -44103627 - MER4D LTR ERV1 0 862 1 238 184 0 0 chr20 22564561 22564599 -44103406 + MER34C LTR ERV1 4 41 -544 1203 214 115 45 chr20 22564907 22565369 -44102636 + LTR54B LTR ERV1 1 494 -4 1090 234 146 68 chr20 22565801 22565932 -44102073 + MER34C LTR ERV1 1 120 -465 2440 77 0 0 chr20 22565932 22566243 -44101762 + AluY SINE Alu 1 311 0 1090 234 146 68 chr20 22566243 22566654 -44101351 + MER34C LTR ERV1 120 585 0 830 171 167 16 chr20 22566894 22567031 -44100974 - MER63 DNA MER1_type -77 984 869 2246 113 0 0 chr20 22567031 22567341 -44100664 - AluSx SINE Alu -2 310 1 830 171 167 16 chr20 22567341 22567448 -44100557 - MER63 DNA MER1_type -192 869 703 2560 145 48 24 chr20 22567448 22567694 -44100311 + LTR24 LTR ERV1 1 265 -202 1660 152 7 7 chr20 22567694 22567990 -44100015 + AluJb SINE Alu 1 296 -16 2560 145 48 24 chr20 22567990 22568199 -44099806 + LTR24 LTR ERV1 265 467 0 388 231 60 0 chr20 22568666 22568783 -44099222 - LTR33 LTR ERVL -89 432 309 315 274 20 41 chr20 22569215 22569361 -44098644 + HAL1 LINE L1 999 1141 -1366 301 274 53 18 chr20 22569530 22569643 -44098362 - LTR16A LTR ERVL -229 221 105 454 331 61 51 chr20 22569856 22570345 -44097660 - ERVL LTR ERVL -377 5387 4894 955 156 9 108 chr20 22570353 22570487 -44097518 + MER3 DNA MER1_type 2 105 -104 1523 148 133 11 chr20 22570487 22570751 -44097254 + AluJb SINE Alu 1 296 -6 955 156 9 108 chr20 22570751 22570847 -44097158 + MER3 DNA MER1_type 105 209 0 661 344 80 18 chr20 22570900 22572085 -44095920 - ERVL LTR ERVL -923 4841 3522 798 279 75 18 chr20 22572169 22572477 -44095528 - LTR16A LTR ERVL -107 350 28 305 212 45 0 chr20 22572522 22572588 -44095417 + HAL1 LINE L1 1425 1493 -1014 1496 163 30 30 chr20 22573627 22573794 -44094211 - AluJb SINE Alu -12 300 131 2178 117 0 0 chr20 22573794 22574101 -44093904 - AluSx SINE Alu -5 307 1 1496 163 30 30 chr20 22574101 22574233 -44093772 - AluJb SINE Alu -180 132 1 426 303 130 23 chr20 22574512 22574812 -44093193 - L1ME2 LINE L1 0 6164 5833 1037 168 50 23 chr20 22574851 22575071 -44092934 - LTR16C LTR ERVL -4 487 262 434 188 10 0 chr20 22575841 22575937 -44092068 + GA-rich Low_complexity Low_complexity 2 98 0 276 159 37 19 chr20 22575991 22576098 -44091907 + GA-rich Low_complexity Low_complexity 2 110 0 532 275 82 77 chr20 22576100 22576453 -44091552 - LTR16B LTR ERVL -92 372 18 35 0 0 0 chr20 22576534 22576569 -44091436 + AT_rich Low_complexity Low_complexity 1 35 0 409 161 0 25 chr20 22576775 22576856 -44091149 + MIR SINE MIR 61 139 -123 1797 158 49 35 chr20 22576875 22577243 -44090762 + THE1C LTR MaLR 1 373 -2 9976 130 11 22 chr20 22577247 22578844 -44089161 + THE1C-int LTR MaLR 3 1580 0 1875 134 56 39 chr20 22578844 22579201 -44088804 + THE1C LTR MaLR 1 363 -12 1638 189 27 3 chr20 22579201 22579502 -44088503 - AluJb SINE Alu -4 308 1 1893 122 7 4 chr20 22580427 22580706 -44087299 + AluSx SINE Alu 1 280 -32 207 186 0 0 chr20 22580708 22580751 -44087254 + (CA)n Simple_repeat Simple_repeat 2 44 0 578 245 69 69 chr20 22581167 22581428 -44086577 + LTR16C LTR ERVL 231 491 0 511 335 113 36 chr20 22581754 22582303 -44085702 - L2 LINE L2 -546 2768 2178 * 773 213 27 43 chr20 22582292 22582480 -44085525 + MER5A DNA MER1_type 5 189 0 353 164 16 0 chr20 22582488 22582549 -44085456 + MER5B DNA MER1_type 1 62 -116 872 157 52 23 chr20 22582551 22582723 -44085282 + AluJb SINE Alu 130 306 -6 2228 115 3 6 chr20 22582726 22583039 -44084966 + AluSx SINE Alu 1 312 0 470 170 0 100 chr20 22583101 22583201 -44084804 - MER81 DNA DNA -1 113 24 261 200 29 14 chr20 22583205 22583275 -44084730 + MER5B DNA MER1_type 108 178 0 459 256 25 38 chr20 22583297 22583457 -44084548 - MER5B DNA MER1_type -16 162 5 200 280 0 0 chr20 22583805 22583855 -44084150 + CT-rich Low_complexity Low_complexity 4 53 0 2504 84 0 0 chr20 22584446 22584754 -44083251 - AluSc SINE Alu -1 308 1 202 204 19 37 chr20 22584899 22584953 -44083052 + CT-rich Low_complexity Low_complexity 3 55 0 2307 102 3 0 chr20 22586277 22586582 -44081423 + AluSx SINE Alu 1 306 -6 1689 158 132 42 chr20 22586994 22587374 -44080631 - MLT2D LTR ERVL 0 414 1 2736 115 33 9 chr20 22587785 22588204 -44079801 + MSTB1 LTR MaLR 1 429 -3 1825 173 23 3 chr20 22588250 22588551 -44079454 - AluSx SINE Alu -5 307 1 1806 231 123 15 chr20 22588595 22589075 -44078930 + MLT1H LTR MaLR 3 534 -15 3534 115 19 8 chr20 22589636 22590157 -44077848 + MER1A DNA MER1_type 1 527 0 270 273 218 0 chr20 22590655 22590765 -44077240 - MIR SINE MIR -56 152 19 1498 56 0 0 chr20 22590927 22591106 -44076899 + AluY SINE Alu 133 311 0 2363 43 11 0 chr20 22592674 22592976 -44075029 - AluY SINE Alu 0 305 1 207 189 11 44 chr20 22593606 22593696 -44074309 + G-rich Low_complexity Low_complexity 5 91 0 187 186 17 17 chr20 22593698 22593757 -44074248 + GA-rich Low_complexity Low_complexity 3 61 0 1911 143 7 20 chr20 22594384 22594678 -44073327 - AluSx SINE Alu -22 290 1 1082 198 12 65 chr20 22595187 22595435 -44072570 + MER8 DNA MER2_type 2 236 -3 284 366 6 0 chr20 22596556 22596728 -44071277 + (TG)n Simple_repeat Simple_repeat 1 173 0 256 256 173 51 chr20 22598018 22598174 -44069831 + MER5A DNA MER1_type 9 183 -6 1053 176 0 0 chr20 22598440 22598610 -44069395 - AluJo SINE Alu -28 284 115 31 0 0 0 chr20 22598617 22598648 -44069357 + AT_rich Low_complexity Low_complexity 1 31 0 734 154 49 16 chr20 22598651 22598774 -44069231 - AluJo SINE Alu -174 128 2 190 254 99 63 chr20 22598779 22598921 -44069084 - L2 LINE L2 -56 3257 3111 28 29 0 0 chr20 22599986 22600021 -44067984 + AT_rich Low_complexity Low_complexity 1 35 0 1372 157 123 42 chr20 22600025 22600286 -44067719 - AluJo SINE Alu -30 282 1 2158 140 135 5 chr20 22600323 22600702 -44067303 - MSTA LTR MaLR 0 428 1 6915 164 12 13 chr20 22600702 22601855 -44066150 - MSTA-int LTR MaLR 0 1580 429 873 182 0 0 chr20 22602876 22603024 -44064981 - MSTA-int LTR MaLR -1167 484 337 33 25 0 0 chr20 22603024 22603064 -44064941 + AT_rich Low_complexity Low_complexity 1 40 0 665 124 0 0 chr20 22603069 22603158 -44064847 - AluJ/FLAM SINE Alu -222 90 2 2325 128 3 0 chr20 22603158 22603509 -44064496 - MSTA-int LTR MaLR -1299 352 1 2310 110 131 8 chr20 22603509 22603890 -44064115 - MSTA LTR MaLR 0 428 1 271 229 0 0 chr20 22604832 22604893 -44063112 + (TA)n Simple_repeat Simple_repeat 1 61 0 2546 57 0 0 chr20 22605793 22606090 -44061915 + AluY SINE Alu 1 297 -14 244 315 85 62 chr20 22606692 22606822 -44061183 - L2 LINE L2 -4 3268 3136 2340 115 0 0 chr20 22606962 22607267 -44060738 - AluSx SINE Alu -3 309 5 318 26 0 0 chr20 22608068 22608107 -44059898 + (CA)n Simple_repeat Simple_repeat 1 39 0 2041 149 0 0 chr20 22609840 22610135 -44057870 - AluSx SINE Alu -17 295 1 738 194 10 75 chr20 22610428 22610629 -44057376 - L1MA10 LINE L1 -1 6333 6146 823 189 41 0 chr20 22611752 22611921 -44056084 - MER3 DNA MER1_type -80 129 1 1570 158 55 48 chr20 22613062 22613222 -44054783 - AluJo SINE Alu -19 293 129 2208 78 10 26 chr20 22613222 22613528 -44054477 - AluY SINE Alu -10 301 1 1570 158 55 48 chr20 22613528 22613658 -44054347 - AluJo SINE Alu -183 129 1 296 283 141 4 chr20 22614454 22614653 -44053352 + MIR SINE MIR 30 262 0 1818 155 20 3 chr20 22614993 22615111 -44052894 + AluJb SINE Alu 1 116 -196 234 91 0 0 chr20 22615111 22615144 -44052861 + (CAAA)n Simple_repeat Simple_repeat 4 36 0 1818 155 20 3 chr20 22615144 22615322 -44052683 + AluJb SINE Alu 116 302 -10 444 193 175 0 chr20 22616283 22616397 -44051608 + MIR SINE MIR 123 256 -6 268 327 70 23 chr20 22617191 22617405 -44050600 - MIR SINE MIR -38 224 1 2606 53 0 0 chr20 22617821 22618125 -44049880 - AluY SINE Alu -7 304 1 2027 161 85 0 chr20 22618232 22618622 -44049383 + Charlie4a DNA MER1_type 20 442 -66 23 0 0 0 chr20 22618810 22618833 -44049172 + AT_rich Low_complexity Low_complexity 1 23 0 336 264 47 16 chr20 22619667 22619796 -44048209 - MER94 DNA DNA 0 134 2 266 279 121 55 chr20 22621196 22621634 -44046371 + L1M4 LINE L1 2254 2720 -3426 532 288 88 18 chr20 22621778 22622108 -44045897 + L1M4 LINE L1 2786 3138 -3008 2129 123 3 3 chr20 22622248 22622558 -44045447 + AluJb SINE Alu 1 310 -2 443 228 35 76 chr20 22622990 22623187 -44044818 - L1ME3A LINE L1 -228 5942 5754 1027 194 14 67 chr20 22623195 22623479 -44044526 - L1MA7 LINE L1 -9 6282 6014 223 273 197 8 chr20 22625056 22625188 -44042817 + MIR3 SINE MIR 33 189 -19 379 265 61 72 chr20 22625332 22625411 -44042594 + MIR SINE MIR 84 162 -100 1996 171 0 0 chr20 22625411 22625721 -44042284 + AluJb SINE Alu 1 310 -2 379 265 61 72 chr20 22625721 22625822 -44042183 + MIR SINE MIR 162 262 0 363 267 29 0 chr20 22625924 22626029 -44041976 + MLT1J2 LTR MaLR 33 140 -310 308 284 42 79 chr20 22626074 22626264 -44041741 + MLT1J LTR MaLR 242 463 -22 483 136 25 0 chr20 22626279 22626360 -44041645 - AluJb SINE Alu -3 309 227 848 145 110 0 chr20 22626360 22626505 -44041500 - AluJb SINE Alu -148 164 4 30 45 0 30 chr20 22626542 22626574 -44041431 + AT_rich Low_complexity Low_complexity 1 32 -32 1574 191 7 28 chr20 22626574 22626862 -44041143 + AluJo SINE Alu 1 282 -30 30 45 0 30 chr20 22626862 22626895 -44041110 + AT_rich Low_complexity Low_complexity 32 64 0 40 21 0 0 chr20 22627277 22627324 -44040681 + AT_rich Low_complexity Low_complexity 1 47 0 441 0 0 0 chr20 22628270 22628319 -44039686 + (TG)n Simple_repeat Simple_repeat 2 50 0 308 294 91 43 chr20 22628924 22629111 -44038894 + MIR SINE MIR 48 243 -19 312 263 33 33 chr20 22629846 22629998 -44038007 + L1MC4a LINE L1 4902 5053 -1093 2200 157 111 0 chr20 22630034 22630441 -44037564 - LTR47A LTR ERVL 0 452 1 3223 247 61 14 chr20 22630457 22631435 -44036570 + L1MC4a LINE L1 5254 6277 -1531 508 301 203 8 chr20 22631903 22632292 -44035713 - L2 LINE L2 -13 3300 2836 21 0 0 0 chr20 22632619 22632640 -44035365 + AT_rich Low_complexity Low_complexity 1 21 0 2054 134 16 3 chr20 22633716 22634024 -44033981 + AluSx SINE Alu 1 355 -33 243 146 0 0 chr20 22634024 22634065 -44033940 + (GGAA)n Simple_repeat Simple_repeat 3 43 0 2054 134 16 3 chr20 22634065 22634100 -44033905 + AluSx SINE Alu 355 388 0 377 146 27 36 chr20 22635053 22635163 -44032842 + (CATA)n Simple_repeat Simple_repeat 3 111 0 974 183 154 8 chr20 22638098 22638338 -44029667 + L1MC2 LINE L1 6029 6303 -41 22 0 0 0 chr20 22638383 22638405 -44029600 + AT_rich Low_complexity Low_complexity 1 22 0 771 103 8 17 chr20 22638405 22638522 -44029483 + AluY SINE Alu 23 138 -173 2277 117 0 0 chr20 22638533 22638842 -44029163 + AluSx SINE Alu 1 309 -3 21 57 0 0 chr20 22638843 22638878 -44029127 + AT_rich Low_complexity Low_complexity 1 35 0 475 159 34 0 chr20 22639515 22639603 -44028402 + AluSg/x SINE Alu 205 295 -15 1260 259 227 8 chr20 22640212 22640684 -44027321 + MLT1E1 LTR MaLR 19 654 0 1032 258 101 21 chr20 22641157 22641545 -44026460 + MLT1J2 LTR MaLR 9 427 -23 22 0 0 0 chr20 22641757 22641779 -44026226 + AT_rich Low_complexity Low_complexity 1 22 0 1920 132 3 17 chr20 22641887 22642174 -44025831 - AluJb SINE Alu -29 283 1 218 370 67 0 chr20 22642483 22642602 -44025403 + L2 LINE L2 3146 3272 0 2364 62 0 17 chr20 22643070 22643361 -44024644 + AluSx SINE Alu 1 286 -26 219 114 0 0 chr20 22643363 22643398 -44024607 + (GGGAGA)n Simple_repeat Simple_repeat 3 37 0 1198 219 39 82 chr20 22643526 22643991 -44024014 + LTR56 LTR ERV1 1 445 0 2280 110 0 3 chr20 22644410 22644719 -44023286 + AluSg SINE Alu 1 308 -2 2138 153 42 11 chr20 22646649 22647003 -44021002 + MLT1A1 LTR MaLR 1 365 0 42 89 0 0 chr20 22647774 22647886 -44020119 + AT_rich Low_complexity Low_complexity 1 112 0 1035 246 59 42 chr20 22648024 22648253 -44019752 - MER115 DNA AcHobo -11 682 445 2739 137 33 5 chr20 22648253 22648675 -44019330 - MER61C LTR ERV1 0 434 1 1035 246 59 42 chr20 22648675 22648734 -44019271 - MER115 DNA AcHobo -248 445 389 375 296 53 23 chr20 22648808 22648940 -44019065 - MER115 DNA AcHobo -434 259 124 * 542 277 191 41 chr20 22648938 22649252 -44018753 + LTR16B LTR ERVL 104 464 0 2500 85 0 0 chr20 22649363 22649669 -44018336 - AluY SINE Alu -5 306 1 579 177 69 15 chr20 22649680 22649810 -44018195 - L1MD2 LINE L1 -2 6357 6221 538 313 13 31 chr20 22649813 22650037 -44017968 + L2 LINE L2 2199 2418 -896 411 315 0 0 chr20 22650117 22650225 -44017780 + L2 LINE L2 3206 3313 0 253 98 20 20 chr20 22650443 22650494 -44017511 + (TTCC)n Simple_repeat Simple_repeat 1 51 0 2238 127 0 0 chr20 22650701 22651001 -44017004 - AluSg SINE Alu -10 300 1 726 283 97 4 chr20 22651055 22651281 -44016724 + MIR SINE MIR 3 249 -13 1101 252 86 16 chr20 22652444 22652758 -44015247 - LTR16C LTR ERVL -2 489 154 303 149 0 0 chr20 22652814 22652861 -44015144 - MLT1H LTR MaLR -2 547 501 25 0 0 0 chr20 22652880 22652905 -44015100 + AT_rich Low_complexity Low_complexity 1 25 0 268 276 77 83 chr20 22653079 22653235 -44014770 - MLT1H LTR MaLR -274 275 121 382 186 0 12 chr20 22653242 22653328 -44014677 - MER53 DNA DNA -1 188 104 2436 188 33 39 chr20 22653339 22653382 -44014623 - MLT2B2 LTR ERVL -1 514 472 835 26 64 13 chr20 22653382 22653538 -44014467 + (TAGA)n Simple_repeat Simple_repeat 3 166 0 2436 188 33 39 chr20 22653538 22654011 -44013994 - MLT2B2 LTR ERVL -43 472 1 180 111 0 0 chr20 22654877 22654904 -44013101 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 283 298 61 15 chr20 22655529 22655660 -44012345 - MIR3 SINE MIR -12 196 60 379 314 22 7 chr20 22655670 22655807 -44012198 - LTR16A1 LTR ERVL 0 457 319 260 26 0 26 chr20 22655965 22656003 -44012002 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 1235 141 31 16 chr20 22656674 22656865 -44011140 + AluJo SINE Alu 1 194 -118 1294 159 0 5 chr20 22656865 22657085 -44010920 - MER83B LTR ERV1 0 378 160 628 144 303 0 chr20 22657083 22657215 -44010790 + LTR39 LTR ERV1 183 354 -429 * 1613 154 85 13 chr20 22657207 22657512 -44010493 + LTR39 LTR ERV1 457 783 0 656 104 83 0 chr20 22657512 22657607 -44010398 + MER89 LTR ERV1 242 344 -215 1903 182 30 14 chr20 22657616 22657714 -44010291 - MER61B LTR ERV1 -29 396 301 459 0 0 0 chr20 22657714 22657765 -44010240 + (CA)n Simple_repeat Simple_repeat 2 52 0 1903 182 30 14 chr20 22657765 22658029 -44009976 - MER61B LTR ERV1 -124 301 28 1145 200 23 0 chr20 22658111 22658326 -44009679 + MER89 LTR ERV1 340 559 0 225 247 0 25 chr20 22658341 22658422 -44009583 + L1P4 LINE L1 5362 5440 -734 464 249 124 12 chr20 22658437 22658674 -44009331 + L1M2 LINE L1 5564 5828 -303 2234 170 23 9 chr20 22659332 22659762 -44008243 + LTR1B LTR ERV1 1 436 -390 696 223 198 0 chr20 22659757 22659959 -44008046 + LTR1B LTR ERV1 585 826 0 * 428 218 18 36 chr20 22660193 22660303 -44007702 - LTR36 LTR ERV1 -57 554 447 242 54 0 27 chr20 22660306 22660343 -44007662 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 741 135 9 0 chr20 22660343 22660454 -44007551 - FRAM SINE Alu -28 148 37 568 171 121 200 chr20 22660474 22660789 -44007216 - LTR36 LTR ERV1 -198 413 124 2047 155 0 0 chr20 22662297 22662588 -44005417 - AluSx SINE Alu -21 291 1 1372 280 55 12 chr20 22662796 22663199 -44004806 - LTR16C LTR ERVL 0 491 72 6562 220 73 32 chr20 22664273 22666900 -44001105 + L1M4 LINE L1 1 2863 -3962 5042 207 37 22 chr20 22666884 22668101 -43999904 + L1M4 LINE L1 4542 5776 -868 * 228 311 22 0 chr20 22668120 22668210 -43999795 + L2 LINE L2 2992 3083 -189 211 229 114 48 chr20 22668989 22669094 -43998911 - L3 LINE CR1 -174 1403 1292 748 296 86 44 chr20 22670188 22670850 -43997155 + L1M4 LINE L1 4446 5135 -1011 2276 179 82 10 chr20 22670932 22671419 -43996586 - MER63C DNA MER1_type -408 522 1 44 20 0 0 chr20 22671552 22671603 -43996402 + AT_rich Low_complexity Low_complexity 1 51 0 1248 240 48 67 chr20 22672233 22672258 -43995747 + LTR16A1 LTR ERVL 3 27 -430 2512 129 3 3 chr20 22672258 22672622 -43995383 - THE1B LTR MaLR 0 364 1 1248 240 48 67 chr20 22672622 22673058 -43994947 + LTR16A1 LTR ERVL 27 455 -2 335 271 29 0 chr20 22673823 22673963 -43994042 + L1M4 LINE L1 3630 3773 -2871 25 0 0 0 chr20 22674159 22674184 -43993821 + AT_rich Low_complexity Low_complexity 1 25 0 299 145 277 0 chr20 22674250 22674333 -43993672 - LTR16C LTR ERVL -3 488 383 682 285 142 24 chr20 22674434 22674844 -43993161 + MLT1H1 LTR MaLR 91 548 -7 426 228 81 13 chr20 22674875 22675024 -43992981 - LTR16C LTR ERVL -160 331 173 242 308 56 30 chr20 22675170 22675368 -43992637 + L2 LINE L2 2846 3048 -224 592 264 49 79 chr20 22675369 22675634 -43992371 - MLT1K LTR MaLR -1 587 331 512 252 131 19 chr20 22676301 22676477 -43991528 - L1ME3A LINE L1 -9 6161 5956 1877 121 0 0 chr20 22676477 22676791 -43991214 - AluSx SINE Alu 0 338 25 512 252 131 19 chr20 22676791 22676819 -43991186 - L1ME3A LINE L1 -214 5956 5933 * 1412 218 35 13 chr20 22676802 22677132 -43990873 - L1ME3A LINE L1 -339 5831 5516 207 69 0 0 chr20 22677217 22677246 -43990759 + (TGAA)n Simple_repeat Simple_repeat 4 32 0 293 358 71 8 chr20 22677957 22678225 -43989780 + L2 LINE L2 2025 2309 -1005 604 267 12 12 chr20 22678416 22678588 -43989417 + LTR16A1 LTR ERVL 267 438 -19 477 311 0 6 chr20 22678798 22678975 -43989030 + C-rich Low_complexity Low_complexity 2 177 0 470 285 149 46 chr20 22679106 22679429 -43988576 + MLT1J2 LTR MaLR 64 419 -31 209 314 71 18 chr20 22679457 22679626 -43988379 + L2 LINE L2 2558 2735 -579 496 255 180 15 chr20 22682002 22682202 -43985803 - MIR SINE MIR -21 241 9 1862 205 79 15 chr20 22682248 22682746 -43985259 + L1ME3A LINE L1 5631 6163 -7 24 0 0 0 chr20 22683264 22683288 -43984717 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr20 22683917 22683939 -43984066 + AT_rich Low_complexity Low_complexity 1 22 0 974 117 7 0 chr20 22683939 22684084 -43983921 - L1PB1 LINE L1 -1 6150 6005 189 0 0 0 chr20 22684354 22684375 -43983630 + (TG)n Simple_repeat Simple_repeat 2 22 0 1884 274 69 8 chr20 22684417 22685008 -43982997 - L1ME3A LINE L1 -5 6165 5539 243 0 0 0 chr20 22685366 22685393 -43982612 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1624 193 69 33 chr20 22686078 22686528 -43981477 - MLT1C LTR MaLR -1 466 1 1031 300 50 5 chr20 22686533 22686913 -43981092 - LTR16A1 LTR ERVL 0 457 61 1197 143 29 29 chr20 22687145 22687354 -43980651 + Tigger2a DNA MER2_type 1 209 -225 539 185 22 0 chr20 22687364 22687456 -43980549 - FRAM SINE Alu -60 116 23 1117 60 16 28 chr20 22687484 22687666 -43980339 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 490 211 54 27 chr20 22687676 22687699 -43980306 + Tigger2a DNA MER2_type 197 218 -2500 1458 194 92 0 chr20 22687699 22687983 -43980022 - AluJo SINE Alu -2 310 1 490 211 54 27 chr20 22687983 22688106 -43979899 + Tigger2a DNA MER2_type 218 347 -97 392 219 76 62 chr20 22688153 22688363 -43979642 + LTR16C LTR ERVL 245 491 0 2498 200 80 26 chr20 22688570 22689230 -43978775 - L1ME2 LINE L1 -8 6156 5461 243 229 82 0 chr20 22689575 22689636 -43978369 + MLT1H LTR MaLR 479 544 -5 232 246 16 0 chr20 22690283 22690344 -43977661 + (CATA)n Simple_repeat Simple_repeat 3 64 0 221 200 30 180 chr20 22691590 22691690 -43976315 + MIR SINE MIR 144 228 -34 2365 110 0 0 chr20 22691735 22692045 -43975960 - AluY SINE Alu -1 310 1 61 27 0 0 chr20 22692088 22692163 -43975842 + AT_rich Low_complexity Low_complexity 1 75 0 205 333 15 0 chr20 22692497 22692563 -43975442 + L2 LINE L2 2992 3058 -214 564 237 62 77 chr20 22692978 22693172 -43974833 - MLT1H LTR MaLR -5 544 354 2210 143 0 0 chr20 22693312 22693620 -43974385 - AluSx SINE Alu -4 308 1 2163 104 7 7 chr20 22693721 22694018 -43973987 + AluSc SINE Alu 1 297 -12 2354 110 0 7 chr20 22694969 22695279 -43972726 + AluSq SINE Alu 1 308 -5 2263 125 3 0 chr20 22695288 22695600 -43972405 + AluSq SINE Alu 1 313 0 1949 148 0 0 chr20 22695971 22696248 -43971757 + AluSx SINE Alu 4 280 -32 222 62 0 0 chr20 22696250 22696282 -43971723 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 493 230 163 43 chr20 22697374 22697446 -43970559 + MIR SINE MIR 12 74 -188 2657 94 17 8 chr20 22697446 22697807 -43970198 - THE1B LTR MaLR 0 364 1 493 230 163 43 chr20 22697807 22697943 -43970062 + MIR SINE MIR 74 245 -17 843 248 232 50 chr20 22698547 22699022 -43968983 - MLT1G1 LTR MaLR -34 561 1 508 268 120 2 chr20 22699624 22699917 -43968088 + LTR16C LTR ERVL 107 487 -4 316 289 115 26 chr20 22700160 22700316 -43967689 + MIR SINE MIR 87 256 -6 2159 122 55 19 chr20 22700468 22700830 -43967175 + THE1C LTR MaLR 1 375 0 273 320 0 29 chr20 22701097 22701200 -43966805 - MLT1K LTR MaLR -346 242 143 948 224 161 70 chr20 22701538 22702080 -43965925 - LTR50 LTR ERVL -25 770 90 479 154 152 11 chr20 22702093 22702185 -43965820 - MER66A LTR ERV1 -9 542 388 715 185 104 116 chr20 22702299 22702643 -43965362 - MER41B LTR ERV1 -129 506 114 279 254 0 0 chr20 22702645 22702712 -43965293 - LTR50 LTR ERVL -727 68 2 204 279 16 0 chr20 22704280 22704341 -43963664 + GA-rich Low_complexity Low_complexity 2 63 0 1406 226 17 20 chr20 22705319 22705611 -43962394 + AluJo SINE Alu 1 291 -11 412 271 57 0 chr20 22705703 22705825 -43962180 - L2 LINE L2 0 3313 3185 2418 107 0 0 chr20 22706176 22706486 -43961519 - AluSq SINE Alu -3 310 1 1713 168 41 0 chr20 22706745 22707037 -43960968 + AluJo SINE Alu 9 312 0 207 0 0 0 chr20 22707824 22707847 -43960158 + (A)n Simple_repeat Simple_repeat 1 23 0 355 235 0 0 chr20 22708396 22708481 -43959524 - L1PB4 LINE L1 -3 6153 6069 3341 191 10 10 chr20 22708481 22709200 -43958805 + L1 LINE L1 4368 5086 -1060 823 147 7 15 chr20 22709971 22710107 -43957898 + AluJo SINE Alu 1 135 -177 567 281 4 62 chr20 22710246 22710488 -43957517 - L2 LINE L2 -5 3308 3081 246 32 0 0 chr20 22710943 22710974 -43957031 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 348 24 0 0 chr20 22711422 22711463 -43956542 + (TG)n Simple_repeat Simple_repeat 1 41 0 265 338 45 8 chr20 22712437 22712570 -43955435 + MIR SINE MIR 118 255 -7 2120 136 0 16 chr20 22712879 22713188 -43954817 + AluSx SINE Alu 1 304 -8 449 224 56 126 chr20 22713357 22713413 -43954592 - L2 LINE L2 -4 3309 3251 907 169 87 31 chr20 22713413 22713608 -43954397 + MER3 DNA MER1_type 1 206 -3 449 224 56 126 chr20 22713608 22713765 -43954240 - L2 LINE L2 -62 3251 3111 204 255 0 0 chr20 22714582 22714629 -43953376 + T-rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr20 22715413 22715434 -43952571 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr20 22718590 22718613 -43949392 + (GA)n Simple_repeat Simple_repeat 1 23 0 484 265 127 0 chr20 22720594 22720783 -43947222 - MIR SINE MIR -9 253 41 2426 96 0 0 chr20 22720951 22721263 -43946742 + AluSq SINE Alu 1 312 -1 1888 208 87 21 chr20 22722153 22722625 -43945380 - MLT1D LTR MaLR -2 503 1 216 97 0 0 chr20 22722660 22722691 -43945314 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 190 308 217 23 chr20 22722711 22722932 -43945073 - L2 LINE L2 -45 3227 2964 1773 194 0 7 chr20 22723159 22723468 -43944537 - AluJo SINE Alu -5 307 1 1283 221 54 19 chr20 22723533 22723850 -43944155 + L1MC4 LINE L1 7259 7586 -456 * 2547 168 72 23 chr20 22723845 22724369 -43943636 - L1MB8 LINE L1 -205 5973 5424 364 73 55 0 chr20 22724366 22724421 -43943584 + L1MC4 LINE L1 7985 8042 0 * 233 321 136 22 chr20 22724924 22725108 -43942897 - L3 LINE CR1 -1138 439 235 930 289 73 47 chr20 22725320 22725579 -43942426 + L2 LINE L2 2414 2665 -648 2180 107 34 0 chr20 22725579 22725870 -43942135 - AluSg SINE Alu -9 301 1 930 289 73 47 chr20 22725870 22726218 -43941787 + L2 LINE L2 2665 3051 -262 2426 89 0 3 chr20 22726218 22726522 -43941483 - AluSx SINE Alu -9 303 1 930 289 73 47 chr20 22726522 22726792 -43941213 + L2 LINE L2 3051 3312 -1 319 264 25 25 chr20 22726935 22727056 -43940949 - LTR16C LTR ERVL 0 491 371 1948 358 60 2 chr20 22727610 22728529 -43939476 - ERVL LTR ERVL -708 5056 4085 254 297 11 0 chr20 22728592 22728683 -43939322 - ERVL LTR ERVL -1778 3986 3895 676 230 14 0 chr20 22728686 22728837 -43939168 - L1PB4 LINE L1 -58 6096 5945 1037 82 7 41 chr20 22728968 22729115 -43938890 - THE1C LTR MaLR 0 375 234 5011 192 29 14 chr20 22729117 22729853 -43938152 - L1PB4 LINE L1 -1004 5142 4383 351 44 0 0 chr20 22729853 22729898 -43938107 + (TG)n Simple_repeat Simple_repeat 2 46 0 5011 192 29 14 chr20 22729898 22730243 -43937762 - L1PB4 LINE L1 -1763 4383 4045 1090 262 114 22 chr20 22730247 22730652 -43937353 - ERVL LTR ERVL -3328 2326 1885 630 285 70 0 chr20 22731172 22731358 -43936647 - LTR16C LTR ERVL -1 490 292 372 189 14 0 chr20 22732691 22732765 -43935240 - MLT1K LTR MaLR -2 586 512 186 311 0 0 chr20 22733213 22733258 -43934747 + MIR3 SINE MIR 141 185 -23 263 28 28 0 chr20 22733669 22733705 -43934300 + (TTCA)n Simple_repeat Simple_repeat 2 38 0 288 290 156 37 chr20 22734208 22734526 -43933479 - MLT1J1 LTR MaLR -20 430 65 308 284 11 11 chr20 22735341 22735436 -43932569 - MER94 DNA DNA -35 99 5 6031 174 24 28 chr20 22735547 22736050 -43931955 + L1MC2 LINE L1 4574 5078 -1266 1973 141 10 7 chr20 22736050 22736341 -43931664 - AluJo SINE Alu -20 292 1 6031 174 24 28 chr20 22736341 22736697 -43931308 + L1MC2 LINE L1 5078 5434 -910 2360 80 0 0 chr20 22736697 22736984 -43931021 + AluY SINE Alu 1 287 -24 180 0 0 0 chr20 22736987 22737007 -43930998 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 6031 174 24 28 chr20 22737007 22737919 -43930086 + L1MC2 LINE L1 5436 6343 -1 24 67 0 0 chr20 22738079 22738124 -43929881 + AT_rich Low_complexity Low_complexity 1 45 0 279 259 205 0 chr20 22738211 22738323 -43929682 - MIR SINE MIR -44 218 84 599 170 36 79 chr20 22738985 22739036 -43928969 - LTR16C LTR ERVL 0 491 439 1593 216 52 3 chr20 22739036 22739384 -43928621 - MLT1A1 LTR MaLR 0 365 1 599 170 36 79 chr20 22739384 22739497 -43928508 - LTR16C LTR ERVL -52 439 334 419 217 52 0 chr20 22739664 22739779 -43928226 - LTR16C LTR ERVL -11 480 360 1767 251 86 48 chr20 22742206 22742328 -43925677 + L1ME3A LINE L1 5485 5601 -569 383 84 28 14 chr20 22742328 22742399 -43925606 - L1MA4A LINE L1 -5 6298 6227 1767 251 86 48 chr20 22742399 22742683 -43925322 + L1ME3A LINE L1 5601 5873 -297 2160 122 0 19 chr20 22742683 22742994 -43925011 + AluSp SINE Alu 1 305 -8 1767 251 86 48 chr20 22742994 22743239 -43924766 + L1ME3A LINE L1 5873 6162 -8 1370 150 18 0 chr20 22743313 22743539 -43924466 + L1PA16 LINE L1 5928 6157 -9 1807 63 0 5 chr20 22744172 22744395 -43923610 + AluY SINE Alu 77 298 -13 2281 103 3 0 chr20 22744409 22744700 -43923305 + AluSx SINE Alu 3 294 -18 664 273 5 16 chr20 22744876 22745070 -43922935 + MIR SINE MIR 65 256 -6 265 242 251 24 chr20 22745477 22745688 -43922317 + MLT1I LTR MaLR 66 324 -122 432 288 46 75 chr20 22748238 22748478 -43919527 - LTR16A1 LTR ERVL -4 453 221 2292 181 74 27 chr20 22748741 22748775 -43919230 + MLT1F LTR MaLR 4 35 -507 3195 91 18 7 chr20 22748775 22749214 -43918791 - MLT2A1 LTR ERVL 0 444 1 2292 181 74 27 chr20 22749214 22749694 -43918311 + MLT1F LTR MaLR 35 542 0 236 315 51 67 chr20 22750175 22750294 -43917711 + MLT1L LTR MaLR 220 337 -278 1657 115 21 80 chr20 22750294 22750633 -43917372 - L1MA2 LINE L1 0 6304 5986 236 315 51 67 chr20 22750633 22750691 -43917314 + MLT1L LTR MaLR 337 394 -221 458 225 124 52 chr20 22750845 22751052 -43916953 - MLT1H1 LTR MaLR -10 532 313 407 101 31 57 chr20 22751134 22751293 -43916712 + (TCTA)n Simple_repeat Simple_repeat 3 157 0 932 252 44 32 chr20 22751293 22751543 -43916462 - MLT1H1 LTR MaLR -302 253 1 525 277 55 32 chr20 22751917 22752227 -43915778 - LTR16C LTR ERVL 0 491 149 816 101 31 0 chr20 22752821 22752950 -43915055 - L1MB3 LINE L1 -3 6180 6048 1885 166 47 0 chr20 22753096 22753440 -43914565 - L1PB4 LINE L1 -4 6152 5793 195 204 0 0 chr20 22753530 22753574 -43914431 + (TATG)n Simple_repeat Simple_repeat 2 45 0 464 122 81 16 chr20 22753655 22754091 -43913914 + (TA)n Simple_repeat Simple_repeat 1 464 0 1033 209 156 73 chr20 22754177 22754574 -43913431 - MLT1H LTR MaLR 0 549 120 2372 93 3 3 chr20 22755054 22755366 -43912639 - AluSq SINE Alu -1 312 1 2179 136 18 12 chr20 22755811 22756149 -43911856 + MER47A DNA MER2_type 27 366 0 323 253 0 0 chr20 22756154 22756233 -43911772 + MER116 DNA Mariner 2 80 0 502 238 79 50 chr20 22756261 22756284 -43911721 - L1MC4a LINE L1 -1905 5903 5882 1849 161 7 3 chr20 22756284 22756583 -43911422 - AluJo SINE Alu -12 300 1 502 238 79 50 chr20 22756583 22756761 -43911244 - L1MC4a LINE L1 -1926 5882 5696 453 229 0 9 chr20 22757113 22757218 -43910787 + MIR SINE MIR 40 143 -119 2086 108 0 7 chr20 22757686 22757963 -43910042 - AluSx SINE Alu -11 301 27 2793 215 64 71 chr20 22758105 22758869 -43909136 - MER21B LTR ERV1 -57 806 48 365 238 0 12 chr20 22758915 22758995 -43909010 - MER21B LTR ERV1 -773 90 12 393 234 121 0 chr20 22759063 22759187 -43908818 - HAL1b LINE L1 -2 1346 1208 529 214 34 0 chr20 22759315 22759432 -43908573 + L2 LINE L2 3186 3306 -7 933 167 0 0 chr20 22759463 22759601 -43908404 + FRAM SINE Alu 14 151 -25 554 243 106 34 chr20 22759638 22759930 -43908075 - HAL1b LINE L1 -971 377 65 1426 247 94 35 chr20 22761752 22762149 -43905856 + MLT1G1 LTR MaLR 10 490 -105 1627 162 55 87 chr20 22762149 22762551 -43905454 - MLT1B LTR MaLR -1 389 1 1426 247 94 35 chr20 22762551 22762648 -43905357 + MLT1G1 LTR MaLR 490 580 -15 558 255 50 6 chr20 22763110 22763271 -43904734 + MIR SINE MIR 8 175 -87 334 301 0 0 chr20 22763428 22763521 -43904484 - L2 LINE L2 0 3313 3221 1067 245 24 27 chr20 22764214 22764512 -43903493 + LTR16C LTR ERVL 193 489 -2 270 73 0 0 chr20 22767539 22767580 -43900425 + (CA)n Simple_repeat Simple_repeat 1 41 0 585 0 0 0 chr20 22770144 22770209 -43897796 + (TA)n Simple_repeat Simple_repeat 2 66 0 36 19 0 19 chr20 22770641 22770671 -43897334 + AT_rich Low_complexity Low_complexity 1 31 -22 1548 167 4 16 chr20 22770671 22770929 -43897076 + AluJb SINE Alu 35 289 -23 36 19 0 19 chr20 22770929 22770952 -43897053 + AT_rich Low_complexity Low_complexity 31 53 0 360 211 142 83 chr20 22771215 22771433 -43896572 + MLT1H LTR MaLR 249 479 -70 219 88 0 0 chr20 22771723 22771757 -43896248 + (TG)n Simple_repeat Simple_repeat 2 35 0 295 217 43 0 chr20 22772151 22772220 -43895785 + MLT1K LTR MaLR 508 579 -9 931 97 20 3 chr20 22772817 22772980 -43895025 + L1MB3 LINE L1 5290 5451 -732 316 170 0 0 chr20 22772980 22773027 -43894978 + MER2 DNA MER2_type 299 345 0 1013 139 0 36 chr20 22773085 22773279 -43894726 - MER2 DNA MER2_type -112 233 47 1679 134 14 4 chr20 22773279 22773555 -43894450 + L1MB3 LINE L1 5905 6183 0 284 342 38 25 chr20 22773612 22773770 -43894235 + MIR SINE MIR 9 168 -94 300 271 0 47 chr20 22774471 22774578 -43893427 + MIR SINE MIR 107 208 -54 2669 22 0 29 chr20 22774702 22775017 -43892988 + AluY SINE Alu 1 306 -5 734 210 14 7 chr20 22775018 22775161 -43892844 - FRAM SINE Alu -32 144 1 2236 111 0 10 chr20 22776008 22776314 -43891691 + AluSx SINE Alu 1 303 -9 246 363 0 24 chr20 22778123 22778246 -43889759 - MIR SINE MIR -55 153 41 1129 282 95 38 chr20 22778631 22779489 -43888516 + L1MEc LINE L1 125 982 -5223 191 219 49 0 chr20 22779818 22779859 -43888146 + MIR SINE MIR 40 82 -180 1098 218 98 109 chr20 22779879 22779949 -43888056 - MLT1J2 LTR MaLR -14 436 367 5936 102 17 7 chr20 22779949 22781031 -43886974 + L1PB2 LINE L1 5059 6149 -2 1098 218 98 109 chr20 22781031 22781401 -43886604 - MLT1J2 LTR MaLR -83 367 1 543 242 27 59 chr20 22781401 22781587 -43886418 + MIR SINE MIR 81 260 -2 239 79 26 0 chr20 22781971 22782009 -43885996 + (CA)n Simple_repeat Simple_repeat 1 39 0 2127 118 0 44 chr20 22783257 22783578 -43884427 - AluJb SINE Alu -5 307 1 2469 87 3 0 chr20 22784049 22784359 -43883646 + AluSq SINE Alu 1 311 -2 305 295 36 36 chr20 22784773 22784912 -43883093 - MIR SINE MIR -32 230 92 834 231 17 0 chr20 22785482 22785655 -43882350 - MER5B DNA MER1_type -2 176 1 2574 61 0 0 chr20 22785890 22786187 -43881818 + AluY SINE Alu 1 297 -14 2194 49 0 0 chr20 22786194 22786459 -43881546 + L1PA7 LINE L1 5724 5988 -166 3585 59 0 0 chr20 22786196 22786619 -43881386 + L1PA6 LINE L1 5726 6148 -6 2059 137 0 36 chr20 22786637 22787029 -43880976 - Tigger3(Golem) DNA MER2_type -1 3028 2 422 277 87 78 chr20 22787603 22787897 -43880108 + MLT1H LTR MaLR 57 358 -191 1893 202 16 21 chr20 22787897 22788273 -43879732 + MLT1A2 LTR MaLR 1 374 0 422 277 87 78 chr20 22788273 22788451 -43879554 + MLT1H LTR MaLR 358 533 -16 379 279 58 0 chr20 22788486 22788590 -43879415 + L2 LINE L2 3200 3309 -4 1135 204 8 191 chr20 22788672 22789182 -43878823 - MLT2B1 LTR ERVL -2 518 137 1537 129 71 0 chr20 22789182 22789406 -43878599 + AluSx SINE Alu 53 292 -20 1135 204 8 191 chr20 22789406 22789508 -43878497 - MLT2B1 LTR ERVL -383 137 18 271 168 18 2 chr20 22790311 22790374 -43877631 - MLT2B1 LTR ERVL 0 464 410 500 90 26 0 chr20 22790376 22790454 -43877551 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 198 0 0 0 chr20 22790475 22790497 -43877508 + (GA)n Simple_repeat Simple_repeat 1 22 0 1223 161 99 0 chr20 22790500 22790711 -43877294 - MLT2B1 LTR ERVL -61 459 228 1604 162 48 42 chr20 22790929 22791233 -43876772 + THE1C LTR MaLR 1 309 -66 2101 131 3 3 chr20 22791233 22791530 -43876475 - AluSx SINE Alu -15 297 1 1604 162 48 42 chr20 22791530 22791583 -43876422 + THE1C LTR MaLR 309 360 -15 617 320 29 20 chr20 22791714 22791958 -43876047 - MIR SINE MIR 0 262 17 1156 265 17 33 chr20 22792113 22792475 -43875530 - LTR16C LTR ERVL -11 480 125 306 125 0 0 chr20 22793129 22793177 -43874828 + (TG)n Simple_repeat Simple_repeat 2 49 0 288 0 0 0 chr20 22793972 22794004 -43874001 + (CA)n Simple_repeat Simple_repeat 1 32 0 561 196 69 94 chr20 22794079 22794470 -43873535 + MLT1G LTR MaLR 107 555 0 647 283 92 7 chr20 22794533 22794805 -43873200 + LTR16C LTR ERVL 1 295 -196 188 277 15 15 chr20 22795591 22795656 -43872349 - MIR SINE MIR -1 261 197 641 279 6 45 chr20 22796079 22796258 -43871747 - MIR SINE MIR -88 174 3 272 363 0 0 chr20 22796581 22796683 -43871322 - MIR SINE MIR 0 262 161 580 213 103 43 chr20 22797500 22797753 -43870252 + LTR16A1 LTR ERVL 62 329 -128 219 69 0 0 chr20 22798090 22798119 -43869886 + (CA)n Simple_repeat Simple_repeat 2 30 0 367 272 139 48 chr20 22798120 22798429 -43869576 - LTR16C LTR ERVL 0 491 155 196 256 0 0 chr20 22798775 22798814 -43869191 - MIR3 SINE MIR -41 167 129 289 128 39 93 chr20 22799017 22799102 -43868903 - L1ME3 LINE L1 -160 6004 5925 1872 211 16 0 chr20 22799311 22799694 -43868311 - L1M4 LINE L1 -1028 5118 4730 507 229 89 0 chr20 22799683 22799827 -43868178 - L1ME3 LINE L1 -439 5731 5573 * 749 267 108 52 chr20 22800547 22801012 -43866993 - LTR16C LTR ERVL 0 491 1 244 351 53 26 chr20 22802499 22802613 -43865392 - L2 LINE L2 -3 3269 3153 732 162 60 0 chr20 22802691 22802808 -43865197 + FLAM_C SINE Alu 8 131 -12 195 217 22 0 chr20 22802987 22803033 -43864972 + MIR SINE MIR 128 174 -88 5145 245 124 21 chr20 22803225 22805257 -43862748 + Charlie7 DNA MER1_type 34 2274 -338 743 239 72 56 chr20 22805279 22805693 -43862312 - L1MC5 LINE L1 -305 7656 7236 298 298 0 12 chr20 22806558 22806642 -43861363 - HAL1 LINE L1 -636 1871 1789 363 222 20 0 chr20 22806688 22806787 -43861218 + L1ME3A LINE L1 5789 5889 -281 1251 192 255 31 chr20 22806805 22807389 -43860616 - HAL1 LINE L1 -739 1768 1054 922 261 43 40 chr20 22807396 22807457 -43860548 - L1ME3A LINE L1 -5 6559 6500 1886 161 3 3 chr20 22807457 22807755 -43860250 - AluJb SINE Alu -14 298 1 922 261 43 40 chr20 22807755 22808069 -43859936 - L1ME3A LINE L1 -64 6500 6183 640 265 63 0 chr20 22808085 22808274 -43859731 - L1ME3A LINE L1 -351 6213 6013 2043 164 21 102 chr20 22808274 22808397 -43859608 - MER66B LTR ERV1 0 486 355 1677 147 110 65 chr20 22808397 22808826 -43859179 - LTR7 LTR ERV1 -2 448 1 2043 164 21 102 chr20 22808826 22809231 -43858774 - MER66B LTR ERV1 -131 355 1 675 246 19 94 chr20 22809231 22809335 -43858670 - L1ME3A LINE L1 -551 6013 5903 2233 107 7 13 chr20 22809335 22809645 -43858360 + AluSq SINE Alu 1 308 -5 675 246 19 94 chr20 22809645 22809848 -43858157 - L1ME3A LINE L1 -661 5903 5724 301 252 91 43 chr20 22809937 22809994 -43858011 - L1ME3A LINE L1 -1006 5534 5481 2153 101 13 7 chr20 22809994 22810292 -43857713 + AluSx SINE Alu 1 300 -12 301 252 91 43 chr20 22810292 22811230 -43856775 - L1ME3A LINE L1 -1059 5481 4412 1550 254 50 10 chr20 22811298 22811700 -43856305 - MER70B LTR ERVL -157 421 4 3284 241 68 62 chr20 22811714 22813348 -43854657 - L1ME3A LINE L1 -2171 4369 2726 1366 132 3 14 chr20 22813346 22813539 -43854466 - L1MC/D LINE L1 -541 5627 5437 * 322 24 71 0 chr20 22813539 22813576 -43854429 + L1PA10 LINE L1 6121 6165 -3 1366 132 3 14 chr20 22813576 22813597 -43854408 - L1MC/D LINE L1 -731 5437 5417 734 288 34 7 chr20 22813601 22813896 -43854109 - L1ME3A LINE L1 -3948 2773 2471 637 280 57 76 chr20 22814107 22814215 -43853790 + L1MEc LINE L1 1727 1836 -4560 1041 208 23 14 chr20 22814215 22814431 -43853574 + MER20 DNA MER1_type 2 219 0 637 280 57 76 chr20 22814431 22815058 -43852947 + L1MEc LINE L1 1836 2448 -3948 284 48 71 0 chr20 22815083 22815125 -43852880 - L1PA10 LINE L1 -3 6165 6121 * 1384 109 0 10 chr20 22815120 22815313 -43852692 + L1P4 LINE L1 5437 5627 -541 1374 248 73 45 chr20 22815311 22815913 -43852092 + L1MEc LINE L1 2401 3019 -3196 * 503 273 110 46 chr20 22815928 22816300 -43851705 - L1MEc LINE L1 -4606 1934 1541 613 332 48 29 chr20 22816356 22816672 -43851333 - HAL1 LINE L1 -1728 779 458 904 284 90 39 chr20 22816715 22817199 -43850806 - L1M4 LINE L1 -2107 4039 3505 2730 77 13 52 chr20 22817199 22817274 -43850731 - THE1C LTR MaLR -2 373 297 2128 88 14 7 chr20 22817274 22817570 -43850435 + AluSg SINE Alu 1 298 -12 2730 77 13 52 chr20 22817570 22817882 -43850123 - THE1C LTR MaLR -78 297 1 904 284 90 39 chr20 22817882 22818116 -43849889 - L1M4 LINE L1 -2641 3505 3284 469 296 98 50 chr20 22818140 22818631 -43849374 - L1M4 LINE L1 -2922 3224 2758 1640 185 0 46 chr20 22818631 22818955 -43849050 - AluJb SINE Alu -3 309 1 469 296 98 50 chr20 22818955 22819001 -43849004 - L1M4 LINE L1 -3388 2758 2716 276 120 0 0 chr20 22819001 22819051 -43848954 + (TCTCTG)n Simple_repeat Simple_repeat 2 51 0 469 296 98 50 chr20 22819051 22819480 -43848525 - L1M4 LINE L1 -3430 2716 2210 521 211 1 70 chr20 22819601 22819759 -43848246 - L1MC4a LINE L1 -303 5818 5682 2350 93 0 0 chr20 22819759 22820060 -43847945 - AluSg SINE Alu -9 301 1 521 211 1 70 chr20 22820060 22820080 -43847925 - L1MC4a LINE L1 -439 5682 5662 462 237 79 13 chr20 22820152 22820304 -43847701 - LTR16C LTR ERVL 0 491 330 193 316 36 58 chr20 22820667 22820751 -43847254 + MIR SINE MIR 26 108 -154 1742 112 0 0 chr20 22820751 22821029 -43846976 - AluSx SINE Alu 0 330 53 193 316 36 58 chr20 22821029 22821082 -43846923 + MIR SINE MIR 108 161 -101 207 0 0 0 chr20 22821153 22821176 -43846829 + (TTG)n Simple_repeat Simple_repeat 1 23 0 1654 159 4 18 chr20 22821180 22821456 -43846549 - AluJo SINE Alu -30 282 11 1755 147 7 47 chr20 22821953 22822252 -43845753 + AluJb SINE Alu 2 288 -24 1808 167 42 83 chr20 22823456 22823754 -43844251 - MLT1B LTR MaLR 0 390 112 2065 141 0 0 chr20 22823754 22824053 -43843952 - AluSx SINE Alu -13 299 1 1808 167 42 83 chr20 22824053 22824161 -43843844 - MLT1B LTR MaLR -278 112 1 544 245 50 40 chr20 22824268 22824468 -43843537 + Charlie5 DNA MER1_type 1 202 -2410 * 1232 172 42 11 chr20 22824467 22824729 -43843276 + Charlie5 DNA MER1_type 2355 2624 0 186 43 0 0 chr20 22825051 22825074 -43842931 + (T)n Simple_repeat Simple_repeat 1 23 0 1477 157 68 32 chr20 22825189 22825469 -43842536 + AluJo SINE Alu 10 299 -13 261 0 0 0 chr20 22826232 22826261 -43841744 + (TG)n Simple_repeat Simple_repeat 2 30 0 241 276 55 37 chr20 22826588 22826751 -43841254 + HAL1 LINE L1 2222 2387 -120 402 337 96 18 chr20 22827084 22827419 -43840586 + L2 LINE L2 2124 2484 -830 3043 240 43 46 chr20 22827538 22828237 -43839768 + L1MB3 LINE L1 4147 4846 -1316 2229 91 0 45 chr20 22828237 22828545 -43839460 - AluSp SINE Alu -19 294 1 3043 240 43 46 chr20 22828545 22828884 -43839121 + L1MB3 LINE L1 4846 5182 -980 691 221 15 0 chr20 22828884 22829015 -43838990 + FLAM_A SINE Alu 1 133 0 3043 240 43 46 chr20 22829015 22829284 -43838721 + L1MB3 LINE L1 5182 5450 -712 1643 135 4 8 chr20 22829292 22829552 -43838453 + L1MB3 LINE L1 5823 6081 -102 1218 216 67 52 chr20 22829552 22829709 -43838296 + MSTB2 LTR MaLR 64 217 -240 1815 176 3 0 chr20 22829709 22830015 -43837990 + AluJo SINE Alu 2 308 -4 1218 216 67 52 chr20 22830015 22830245 -43837760 + MSTB2 LTR MaLR 217 457 0 948 378 35 18 chr20 22830246 22831046 -43836959 + ERVL LTR ERVL 4531 5344 -420 258 327 10 19 chr20 22831294 22831398 -43836607 + LTR16A LTR ERVL 105 207 -243 1456 245 132 38 chr20 22831473 22831632 -43836373 - L2 LINE L2 -2 3311 3168 2133 114 10 10 chr20 22831632 22831938 -43836067 + AluSx SINE Alu 1 306 -6 1456 245 132 38 chr20 22831938 22832682 -43835323 - L2 LINE L2 -145 3168 2318 522 263 80 90 chr20 22832724 22833036 -43834969 + LTR16A1 LTR ERVL 147 455 -2 404 250 10 10 chr20 22833058 22833162 -43834843 - L2 LINE L2 -1042 2272 2169 1484 230 104 0 chr20 22833463 22833846 -43834159 + L1ME3A LINE L1 5727 6149 -21 2045 224 49 16 chr20 22833876 22834328 -43833677 - LTR40a LTR ERVL -52 467 1 232 253 0 22 chr20 22834516 22834607 -43833398 + L1MC4 LINE L1 6615 6703 -1339 539 70 70 23 chr20 22834649 22834820 -43833185 + (CTATA)n Simple_repeat Simple_repeat 2 180 0 * 589 83 0 89 chr20 22834783 22835098 -43832907 + (TA)n Simple_repeat Simple_repeat 1 286 0 308 102 0 34 chr20 22835126 22835185 -43832820 + (CAGAGA)n Simple_repeat Simple_repeat 2 58 0 318 260 79 8 chr20 22835323 22835450 -43832555 - L1MC/D LINE L1 -1976 5832 5697 435 302 34 36 chr20 22835530 22835760 -43832245 - L1MC/D LINE L1 -539 5582 5357 363 268 19 55 chr20 22835766 22835944 -43832061 - MIR SINE MIR -30 232 68 558 327 83 40 chr20 22835954 22836352 -43831653 + MLT1J LTR MaLR 12 426 -85 202 322 86 26 chr20 22836731 22836883 -43831122 + MIR SINE MIR 52 212 -50 351 96 0 0 chr20 22839065 22839117 -43828888 + (TG)n Simple_repeat Simple_repeat 2 53 0 321 272 64 85 chr20 22840854 22841089 -43826916 - MIR SINE MIR -12 250 21 437 176 0 24 chr20 22842713 22842798 -43825207 + FRAM SINE Alu 75 157 -19 2031 128 3 3 chr20 22842802 22843107 -43824898 + AluSx SINE Alu 3 307 0 918 241 165 35 chr20 22843107 22843513 -43824492 + MLT1H LTR MaLR 91 549 0 769 258 112 8 chr20 22843744 22844160 -43823845 + LTR16C LTR ERVL 3 489 -2 761 224 172 50 chr20 22844217 22844560 -43823445 - MLT1J1 LTR MaLR -24 422 38 21 36 0 0 chr20 22850718 22850746 -43817259 + AT_rich Low_complexity Low_complexity 1 28 0 198 174 0 0 chr20 22852853 22852899 -43815106 + (CA)n Simple_repeat Simple_repeat 2 47 0 209 216 0 20 chr20 22856395 22856446 -43811559 - MIR SINE MIR -139 69 20 184 222 0 44 chr20 22856582 22856627 -43811378 + MIR SINE MIR 63 105 -103 971 246 36 24 chr20 22856631 22857039 -43810966 - LTR16C LTR ERVL 0 491 45 1046 235 118 54 chr20 22857043 22857496 -43810509 + MLT1G1 LTR MaLR 9 436 -131 1938 140 86 0 chr20 22857496 22857810 -43810195 + MLT2C1 LTR ERVL 1 341 -56 237 65 0 0 chr20 22857844 22857875 -43810130 + (CA)n Simple_repeat Simple_repeat 2 32 0 264 157 39 0 chr20 22857881 22857932 -43810073 + MLT2C1 LTR ERVL 464 516 -4 861 176 88 0 chr20 22858965 22859124 -43808881 - FAM SINE Alu -2 173 1 231 263 61 10 chr20 22859192 22859291 -43808714 + L1MCc LINE L1 51 154 -6269 1711 171 119 44 chr20 22859447 22859902 -43808103 - L1M4 LINE L1 -1392 4754 4266 1058 269 71 48 chr20 22860405 22860485 -43807520 + LTR16C LTR ERVL 89 166 -325 1524 196 70 50 chr20 22860485 22860781 -43807224 - MLT1A1 LTR MaLR 0 365 59 2432 109 0 0 chr20 22860781 22861093 -43806912 + AluSx SINE Alu 1 312 0 1524 196 70 50 chr20 22861093 22861154 -43806851 - MLT1A1 LTR MaLR -306 59 1 1058 269 71 48 chr20 22861154 22861467 -43806538 + LTR16C LTR ERVL 166 491 0 299 259 49 12 chr20 22861468 22861549 -43806456 - MIR SINE MIR -104 104 21 342 308 56 46 chr20 22862106 22862301 -43805704 + L1MC4a LINE L1 5729 5925 -1883 22 35 0 0 chr20 22862504 22862533 -43805472 + AT_rich Low_complexity Low_complexity 1 29 0 208 256 0 0 chr20 22863376 22863419 -43804586 + A-rich Low_complexity Low_complexity 3 45 0 199 277 193 0 chr20 22863631 22863714 -43804291 + MIR SINE MIR 95 193 -69 785 230 16 78 chr20 22863800 22864057 -43803948 - MLT1F LTR MaLR 0 542 302 412 154 44 22 chr20 22864062 22864141 -43803864 - MLT1F LTR MaLR -440 102 22 2403 125 34 16 chr20 22864141 22864251 -43803754 + MLT1B LTR MaLR 1 108 -282 2213 176 56 7 chr20 22864251 22864659 -43803346 - MSTA LTR MaLR 0 428 1 2403 125 34 16 chr20 22864659 22864931 -43803074 + MLT1B LTR MaLR 108 390 0 1506 161 64 0 chr20 22864995 22865275 -43802730 + L1MB7 LINE L1 5887 6184 0 420 324 7 0 chr20 22865641 22865789 -43802216 + MIR SINE MIR 3 151 -111 651 288 31 18 chr20 22865984 22866210 -43801795 - MIR SINE MIR -14 248 20 606 256 0 0 chr20 22866594 22866750 -43801255 - MIR SINE MIR -34 228 73 1984 131 16 3 chr20 22867582 22867888 -43800117 - AluSx SINE Alu -2 310 1 1115 132 7 0 chr20 22868016 22868168 -43799837 + FRAM SINE Alu 1 150 -26 21 0 0 0 chr20 22868170 22868191 -43799814 + AT_rich Low_complexity Low_complexity 1 21 0 1191 116 5 183 chr20 22868235 22868275 -43799730 - MLT2D LTR ERVL 0 414 369 213 39 0 0 chr20 22868275 22868301 -43799704 + (CA)n Simple_repeat Simple_repeat 2 27 0 1191 116 5 183 chr20 22868301 22868326 -43799679 - MLT2D LTR ERVL -45 369 341 1257 61 0 0 chr20 22868326 22868506 -43799499 + (TA)n Simple_repeat Simple_repeat 1 180 0 1191 116 5 183 chr20 22868506 22868783 -43799222 - MLT2D LTR ERVL -73 341 1 1280 124 158 101 chr20 22868815 22869170 -43798835 - THE1C LTR MaLR 0 375 1 683 164 30 85 chr20 22869285 22869366 -43798639 - MER3 DNA MER1_type 0 209 140 2168 131 0 3 chr20 22869366 22869671 -43798334 + AluSx SINE Alu 1 304 -8 683 164 30 85 chr20 22869671 22869754 -43798251 - MER3 DNA MER1_type -69 140 54 2679 179 11 2 chr20 22869801 22870264 -43797741 + MLT1C LTR MaLR 1 467 0 2418 88 3 0 chr20 22870350 22870646 -43797359 + AluSp SINE Alu 1 297 -16 1295 181 69 72 chr20 22870650 22870970 -43797035 + MER21A LTR ERV1 260 578 -353 234 163 0 0 chr20 22871072 22871115 -43796890 + MER116 DNA Mariner 38 80 0 324 266 88 9 chr20 22871222 22871335 -43796670 + MIR3 SINE MIR 78 199 -9 867 270 47 92 chr20 22871997 22872442 -43795563 + MER115 DNA AcHobo 1 425 -268 784 216 28 6 chr20 22872475 22872651 -43795354 + MER115 DNA AcHobo 511 690 -3 2187 104 0 58 chr20 22872809 22873135 -43794870 + AluSx SINE Alu 1 307 -5 334 269 172 11 chr20 22873249 22873435 -43794570 - MIR SINE MIR -24 238 23 243 242 13 70 chr20 22873876 22874033 -43793972 + (CCCCG)n Simple_repeat Simple_repeat 2 149 0 375 232 141 0 chr20 22875782 22875881 -43792124 + MIR3 SINE MIR 45 157 -51 195 42 0 0 chr20 22876040 22876064 -43791941 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 2149 102 0 0 chr20 22876070 22876345 -43791660 - AluSx SINE Alu -37 275 1 257 340 103 0 chr20 22877162 22877356 -43790649 + L3b LINE CR1 1102 1315 -268 2147 131 10 0 chr20 22877485 22877776 -43790229 + AluSx SINE Alu 1 294 -18 1281 259 87 64 chr20 22877798 22878374 -43789631 - L1MC4 LINE L1 -6 8036 7448 532 243 30 24 chr20 22879632 22879801 -43788204 + L2 LINE L2 3139 3308 -5 2035 132 3 28 chr20 22880294 22880613 -43787392 - AluSx SINE Alu -1 311 1 23 33 0 0 chr20 22881021 22881051 -43786954 + AT_rich Low_complexity Low_complexity 1 30 0 304 324 150 0 chr20 22882360 22882533 -43785472 + MIR SINE MIR 29 227 -35 251 262 16 162 chr20 22882579 22882693 -43785312 + L2 LINE L2 2915 2992 -280 2233 128 0 0 chr20 22882693 22882999 -43785006 - AluSx SINE Alu -6 306 1 251 262 16 162 chr20 22882999 22883075 -43784930 + L2 LINE L2 2992 3077 -195 23 0 0 0 chr20 22883875 22883898 -43784107 + AT_rich Low_complexity Low_complexity 1 23 0 21 71 0 0 chr20 22883960 22884002 -43784003 + AT_rich Low_complexity Low_complexity 1 42 0 727 200 0 0 chr20 22884632 22884752 -43783253 - FLAM_A SINE Alu -10 132 13 274 175 123 0 chr20 22884767 22884824 -43783181 - AluSg/x SINE Alu -121 181 118 664 271 91 84 chr20 22885544 22885822 -43782183 - L1MC4 LINE L1 -1 8041 7766 1649 182 21 4 chr20 22885822 22886102 -43781903 - AluJo SINE Alu -25 287 3 664 271 91 84 chr20 22886102 22886410 -43781595 - L1MC4 LINE L1 -276 7766 7331 864 171 28 34 chr20 22886412 22886588 -43781417 + MER3 DNA MER1_type 2 129 -80 1694 250 35 70 chr20 22886590 22886983 -43781022 - L1MC4 LINE L1 -592 7450 7092 785 131 0 25 chr20 22886983 22887105 -43780900 - 5S rRNA rRNA 0 121 3 1694 250 35 70 chr20 22887105 22887430 -43780575 - L1MC4 LINE L1 -950 7092 6757 1525 160 0 91 chr20 22888731 22889049 -43778956 + AluJo SINE Alu 3 291 -21 21 36 0 0 chr20 22889049 22889077 -43778928 + AT_rich Low_complexity Low_complexity 1 28 0 580 257 109 6 chr20 22889228 22889411 -43778594 - LTR16C LTR ERVL 0 491 290 234 0 0 0 chr20 22889831 22889857 -43778148 + (CA)n Simple_repeat Simple_repeat 2 27 0 240 100 0 0 chr20 22889857 22889897 -43778108 + (TC)n Simple_repeat Simple_repeat 1 40 0 210 312 28 9 chr20 22889920 22890029 -43777976 + CT-rich Low_complexity Low_complexity 5 115 0 189 178 0 0 chr20 22890112 22890157 -43777848 + (CA)n Simple_repeat Simple_repeat 1 45 0 270 319 216 0 chr20 22890316 22890432 -43777573 + L2 LINE L2 3116 3256 -16 1137 164 10 10 chr20 22890628 22890850 -43777155 + AluJb SINE Alu 88 309 0 197 326 32 0 chr20 22891231 22891326 -43776679 + MIR3 SINE MIR 110 207 -1 216 158 0 0 chr20 22893298 22893336 -43774669 + (TA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr20 22894853 22894874 -43773131 + AT_rich Low_complexity Low_complexity 1 21 0 306 0 0 0 chr20 22895994 22896028 -43771977 + (TG)n Simple_repeat Simple_repeat 1 34 0 21 36 0 0 chr20 22896608 22896636 -43771369 + AT_rich Low_complexity Low_complexity 1 28 0 808 291 86 0 chr20 22897004 22897238 -43770767 - MIR SINE MIR 0 262 9 936 259 23 8 chr20 22897890 22898152 -43769853 - LTR16C LTR ERVL 0 491 226 473 244 30 67 chr20 22899047 22899211 -43768794 - MIR SINE MIR -37 225 68 251 346 23 15 chr20 22899824 22899954 -43768051 + L1P4 LINE L1 5617 5747 -419 24 53 0 0 chr20 22900302 22900340 -43767665 + AT_rich Low_complexity Low_complexity 1 38 0 230 263 259 6 chr20 22901058 22901166 -43766839 + MIR SINE MIR 34 156 -85 1834 158 60 25 chr20 22901623 22901991 -43766014 - MLT1B LTR MaLR 0 390 10 22 35 0 0 chr20 22902011 22902040 -43765965 + AT_rich Low_complexity Low_complexity 1 29 0 3435 152 18 41 chr20 22903086 22903751 -43764254 + L1MB7 LINE L1 5534 6183 -1 482 297 56 30 chr20 22903827 22904093 -43763912 - L1ME LINE L1 -359 5762 5490 1286 173 4 24 chr20 22904103 22904358 -43763647 - L1MD3 LINE L1 0 7995 7746 26 30 0 0 chr20 22904360 22904393 -43763612 + AT_rich Low_complexity Low_complexity 1 33 0 1204 130 62 19 chr20 22904430 22904638 -43763367 + Tigger3(Golem) DNA MER2_type 62 278 -2751 1024 198 5 109 chr20 22904642 22905010 -43762995 + L1MC4 LINE L1 7711 8040 -2 791 172 31 0 chr20 22905010 22905138 -43762867 + FLAM_A SINE Alu 1 132 -1 829 245 10 0 chr20 22906391 22906591 -43761414 + L1MC/D LINE L1 5615 5816 -1992 1075 156 7 0 chr20 22906835 22906989 -43761016 - FRAM SINE Alu -11 155 1 1313 162 34 49 chr20 22907030 22907319 -43760686 - AluSq SINE Alu 0 313 29 2701 172 36 62 chr20 22907412 22908058 -43759947 - L1MB7 LINE L1 -74 6110 5482 2191 176 19 27 chr20 22908058 22908468 -43759537 - MER54A LTR ERVL 0 901 495 1171 171 27 2 chr20 22908668 22908694 -43759311 - L1MB7 LINE L1 -710 5468 5444 1942 192 31 17 chr20 22908694 22909054 -43758951 + MLT1A1 LTR MaLR 1 365 0 1171 171 27 2 chr20 22909054 22909349 -43758656 - L1MB7 LINE L1 -734 5444 5167 2107 106 42 0 chr20 22909381 22909664 -43758341 - AluSq SINE Alu -18 295 1 287 130 19 0 chr20 22911342 22911396 -43756609 + CT-rich Low_complexity Low_complexity 2 56 0 229 279 0 58 chr20 22911958 22912044 -43755961 - MIR3 SINE MIR -21 187 107 1126 176 88 0 chr20 22913627 22913866 -43754139 + MLT1E1 LTR MaLR 1 260 -394 723 186 32 0 chr20 22913870 22913994 -43754011 - AluSq SINE Alu -52 261 134 1390 104 0 0 chr20 22913994 22914177 -43753828 - AluSp SINE Alu -9 304 122 334 147 0 0 chr20 22914653 22914721 -43753284 - AluSp SINE Alu -167 136 69 1336 158 0 0 chr20 22914721 22914924 -43753081 - AluSx SINE Alu -109 203 1 1822 199 84 3 chr20 22914925 22915271 -43752734 + MLT1E1 LTR MaLR 281 654 0 2098 122 27 0 chr20 22915591 22915885 -43752120 - AluSq SINE Alu -11 302 1 259 157 0 20 chr20 22915903 22915954 -43752051 - L1MC2 LINE L1 -253 6091 6042 3791 31 2 0 chr20 22915954 22916379 -43751626 - L1PA4 LINE L1 -2 6153 5728 8309 25 7 0 chr20 22916394 22917714 -43750291 + L1PA4 LINE L1 4421 5745 -410 4119 145 36 54 chr20 22917714 22918179 -43749826 - L1MC2 LINE L1 -292 6052 5614 3496 90 2 62 chr20 22918179 22918423 -43749582 - L1MA2 LINE L1 0 6304 6108 2562 54 0 0 chr20 22918423 22918719 -43749286 - AluY SINE Alu -15 296 1 3496 90 2 62 chr20 22918719 22919009 -43748996 - L1MA2 LINE L1 -196 6108 5802 4119 145 36 54 chr20 22919009 22919464 -43748541 - L1MC2 LINE L1 -730 5614 5152 1885 154 3 3 chr20 22919478 22919776 -43748229 - AluJb SINE Alu -14 298 1 1827 266 7 14 chr20 22919780 22920205 -43747800 + MLT1H1 LTR MaLR 132 553 -2 244 275 65 72 chr20 22920213 22920354 -43747651 - L2 LINE L2 -3 3269 3129 1802 146 31 11 chr20 22920354 22920641 -43747364 + AluJb SINE Alu 1 293 -19 244 275 65 72 chr20 22920641 22920785 -43747220 - L2 LINE L2 -143 3129 2985 2293 257 125 18 chr20 22920893 22921327 -43746678 - L2 LINE L2 -303 3010 2624 2365 110 0 0 chr20 22921327 22921635 -43746370 + AluSx SINE Alu 1 308 -4 2293 257 125 18 chr20 22921635 22922115 -43745890 - L2 LINE L2 -689 2624 1997 318 283 131 0 chr20 22922117 22922216 -43745789 - MIR SINE MIR -140 122 11 498 178 204 32 chr20 22922229 22922386 -43745619 - MIR SINE MIR 0 262 79 2778 137 29 80 chr20 22923571 22923759 -43744246 + L1MCb LINE L1 565 761 -5350 1838 152 0 20 chr20 22923759 22924055 -43743950 + AluSx SINE Alu 1 290 -22 2042 138 0 0 chr20 22924059 22924342 -43743663 + AluSx SINE Alu 1 283 -29 231 36 0 0 chr20 22924342 22924370 -43743635 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 2778 137 29 80 chr20 22924370 22924900 -43743105 + L1MCb LINE L1 762 1259 -4852 13641 175 34 17 chr20 22924901 22928221 -43739784 - L1MB1 LINE L1 -274 5894 2509 1242 195 93 30 chr20 22928768 22929070 -43738935 + MLT1G LTR MaLR 270 590 0 2095 132 0 0 chr20 22929494 22929790 -43738215 - AluSx SINE Alu -16 296 1 530 277 19 34 chr20 22929855 22930061 -43737944 - MLT1L LTR MaLR -8 607 405 1080 181 29 19 chr20 22930092 22930302 -43737703 + MLT1A2 LTR MaLR 1 212 -162 426 235 92 10 chr20 22930415 22930513 -43737492 - MLT1L LTR MaLR -365 250 145 2090 128 0 13 chr20 22930545 22930851 -43737154 + AluSx SINE Alu 1 302 -10 275 300 36 36 chr20 22930974 22931114 -43736891 - MLT1L LTR MaLR -458 157 18 241 208 0 0 chr20 22931250 22931298 -43736707 + L1ME4a LINE L1 6074 6121 0 702 137 8 23 chr20 22931315 22931446 -43736559 + L1MB8 LINE L1 6050 6178 0 2292 89 3 10 chr20 22932178 22932481 -43735524 - AluSq SINE Alu -12 301 1 1665 182 11 7 chr20 22932804 22933090 -43734915 + AluJo SINE Alu 12 298 -14 228 111 0 0 chr20 22933094 22933130 -43734875 + (TG)n Simple_repeat Simple_repeat 1 36 0 2269 109 0 3 chr20 22933439 22933742 -43734263 - AluSx SINE Alu -10 302 1 1133 142 0 0 chr20 22933746 22933908 -43734097 - AluJb SINE Alu -15 297 136 924 196 91 18 chr20 22935005 22935224 -43732781 + MER46A DNA MER2_type 1 235 -1 3296 179 26 13 chr20 22935999 22936614 -43731391 + MER39 LTR ERV1 85 707 0 2250 68 0 31 chr20 22936708 22937039 -43730966 - AluY SINE Alu 0 322 1 845 145 0 0 chr20 22937041 22937165 -43730840 - FLAM_C SINE Alu -9 134 11 197 319 101 0 chr20 22939190 22939259 -43728746 - L2 LINE L2 -1 3271 3196 198 0 0 0 chr20 22940311 22940333 -43727672 + (T)n Simple_repeat Simple_repeat 1 22 0 746 183 0 0 chr20 22940349 22940480 -43727525 - FLAM_A SINE Alu -2 131 1 1234 249 107 53 chr20 22940628 22941190 -43726815 - LTR29 LTR ERV1 -28 594 3 5007 34 0 0 chr20 22941488 22942047 -43725958 + L1PA4 LINE L1 5594 6152 -3 918 117 0 58 chr20 22942740 22942877 -43725128 + FLAM_C SINE Alu 2 130 -3 489 190 116 0 chr20 22943344 22943465 -43724540 + MER97c DNA MER1_type? 42 176 -914 558 248 15 79 chr20 22943642 22943844 -43724161 + Charlie8 DNA MER1_type 3 191 -2226 2345 71 0 0 chr20 22946087 22946392 -43721613 - AluY SINE Alu 0 305 1 1949 144 3 7 chr20 22947852 22948150 -43719855 - AluSx SINE Alu -15 297 1 3265 127 73 30 chr20 22948298 22948803 -43719202 - MER1A DNA MER1_type 0 527 1 1919 136 14 10 chr20 22948932 22949227 -43718778 + AluJb SINE Alu 5 300 -12 261 215 105 76 chr20 22950680 22950852 -43717153 - L1MC4 LINE L1 -1 8041 7865 2006 212 97 112 chr20 22950895 22951813 -43716192 - L1MC5 LINE L1 -89 7872 6973 2085 144 37 64 chr20 22951813 22952136 -43715869 - L1MB2 LINE L1 0 6171 5862 2572 7 0 0 chr20 22952136 22952412 -43715593 - AluYa5 SINE Alu -2 309 34 2085 144 37 64 chr20 22952412 22952525 -43715480 - L1MB2 LINE L1 -309 5862 5747 2006 212 97 112 chr20 22952525 22952772 -43715233 - L1MC5 LINE L1 -988 6973 6724 257 258 15 0 chr20 22952961 22953027 -43714978 + MER5B DNA MER1_type 1 67 -111 764 167 0 0 chr20 22953028 22953142 -43714863 + AluJb SINE Alu 3 116 -196 22 35 0 0 chr20 22953157 22953186 -43714819 + AT_rich Low_complexity Low_complexity 1 29 0 457 274 16 0 chr20 22953194 22953318 -43714687 + MER5B DNA MER1_type 47 172 -6 29 0 0 0 chr20 22953676 22953705 -43714300 + AT_rich Low_complexity Low_complexity 1 29 0 2186 92 35 0 chr20 22953710 22953992 -43714013 + AluSc SINE Alu 1 292 -17 187 283 101 101 chr20 22954508 22954755 -43713250 - L2 LINE L2 -354 2960 2714 411 314 39 0 chr20 22955456 22955612 -43712393 + CT-rich Low_complexity Low_complexity 6 167 0 2022 116 0 35 chr20 22955733 22956044 -43711961 - AluSx SINE Alu -12 300 1 2496 54 3 0 chr20 22956451 22956745 -43711260 + AluY SINE Alu 1 295 -16 659 298 76 48 chr20 22957985 22958094 -43709911 - L1ME4a LINE L1 -59 6062 5957 1815 124 0 0 chr20 22958094 22958336 -43709669 + AluSx SINE Alu 40 281 -31 659 298 76 48 chr20 22958336 22959083 -43708922 - L1ME4a LINE L1 -164 5957 5177 2121 112 0 0 chr20 22959841 22960126 -43707879 + AluSx SINE Alu 6 290 -22 1835 147 103 26 chr20 22960330 22960670 -43707335 + MER47A DNA MER2_type 1 366 0 201 308 0 19 chr20 22961730 22961782 -43706223 + MIR SINE MIR 20 70 -138 203 261 252 17 chr20 22965664 22965783 -43702222 + MIR SINE MIR 99 245 -17 228 196 252 37 chr20 22967100 22967207 -43700798 + L3 LINE CR1 1147 1276 -301 1920 151 0 20 chr20 22967343 22967647 -43700358 - AluJb SINE Alu -14 298 1 222 229 34 17 chr20 22968083 22968201 -43699804 + (TA)n Simple_repeat Simple_repeat 1 120 0 27 29 0 0 chr20 22968207 22968241 -43699764 + AT_rich Low_complexity Low_complexity 1 34 0 334 347 123 18 chr20 22968306 22968487 -43699518 - MIR SINE MIR -63 145 3 1754 143 14 0 chr20 22968490 22968809 -43699196 - AluSx SINE Alu 0 323 1 310 193 105 0 chr20 22969316 22969373 -43698632 + L2 LINE L2 3250 3312 -1 439 285 20 6 chr20 22970301 22970451 -43697554 + MER5B DNA MER1_type 28 184 -5 1196 178 51 88 chr20 22970576 22970974 -43697031 - MLT1B LTR MaLR 0 390 8 2289 103 0 26 chr20 22971695 22972007 -43695998 - AluSx SINE Alu -8 304 1 1961 107 54 3 chr20 22972010 22972308 -43695697 - AluSp SINE Alu 0 313 1 261 376 78 0 chr20 22973958 22974099 -43693906 - L3b LINE CR1 -156 1427 1276 510 237 5 108 chr20 22974162 22974356 -43693649 + MER102b DNA MER1_type 153 326 -15 300 209 284 22 chr20 22975788 22975922 -43692083 + MER112 DNA MER1_type 57 225 -35 24 32 0 0 chr20 22975978 22976009 -43691996 + AT_rich Low_complexity Low_complexity 1 31 0 1926 140 11 4 chr20 22977583 22977903 -43690102 - AluJb SINE Alu 0 324 3 1691 193 24 0 chr20 22978224 22978514 -43689491 + AluJo SINE Alu 3 299 -13 231 325 108 8 chr20 22978869 22978989 -43689016 - MIR3 SINE MIR -8 200 69 2084 113 31 0 chr20 22979080 22979373 -43688632 + AluSx SINE Alu 1 302 -10 189 0 0 0 chr20 22982803 22982824 -43685181 + (A)n Simple_repeat Simple_repeat 1 21 0 2086 122 7 16 chr20 22984742 22985045 -43682960 + AluSx SINE Alu 1 300 -12 2250 125 0 0 chr20 22985049 22985352 -43682653 + AluSx SINE Alu 1 303 -9 206 274 16 32 chr20 22985654 22985716 -43682289 + L2 LINE L2 2959 3019 -253 1895 149 7 3 chr20 22985861 22986157 -43681848 - AluJb SINE Alu -14 298 2 22 0 0 0 chr20 22986248 22986270 -43681735 + AT_rich Low_complexity Low_complexity 1 22 0 300 138 0 0 chr20 22986382 22986447 -43681558 + (TG)n Simple_repeat Simple_repeat 1 65 0 296 333 9 0 chr20 22986733 22986841 -43681164 + L2 LINE L2 3123 3231 -41 350 256 13 0 chr20 22987175 22987253 -43680752 - MIR SINE MIR -109 153 75 259 263 84 21 chr20 22987441 22987536 -43680469 + MIR3 SINE MIR 65 165 -43 22 35 0 0 chr20 22988130 22988159 -43679846 + AT_rich Low_complexity Low_complexity 1 29 0 2117 102 32 0 chr20 22988162 22988445 -43679560 - AluSx SINE Alu -20 292 1 1719 194 25 0 chr20 22988700 22989015 -43678990 + MER58B DNA MER1_type 19 341 0 235 297 102 34 chr20 22990066 22990184 -43677821 - L2 LINE L2 -5 3267 3142 479 318 24 35 chr20 22990311 22990566 -43677439 - L2 LINE L2 -512 2802 2551 329 296 10 0 chr20 22992948 22993046 -43674959 + L2 LINE L2 2924 3022 -250 423 330 48 5 chr20 22993368 22993574 -43674431 + MIR SINE MIR 14 228 -34 1150 236 75 25 chr20 22993711 22994071 -43673934 + LTR16C LTR ERVL 85 462 -29 4115 160 83 94 chr20 22994812 22994934 -43673071 + L1MB8 LINE L1 4585 4707 -1471 2161 89 0 0 chr20 22994934 22995204 -43672801 + AluSx SINE Alu 39 308 -4 4115 160 83 94 chr20 22995204 22995577 -43672428 + L1MB8 LINE L1 4707 5083 -1095 2028 119 0 0 chr20 22995577 22995838 -43672167 + AluSq SINE Alu 1 261 -52 623 158 0 0 chr20 22995838 22995933 -43672072 + AluSp/q SINE Alu 202 296 -17 4115 160 83 94 chr20 22995933 22996034 -43671971 + L1MB8 LINE L1 5082 5183 -995 2159 115 10 3 chr20 22996034 22996329 -43671676 + AluSx SINE Alu 1 297 -15 4115 160 83 94 chr20 22996329 22997224 -43670781 + L1MB8 LINE L1 5183 6164 -14 181 73 24 24 chr20 22997961 22998002 -43670003 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 553 255 77 20 chr20 22998422 22998618 -43669387 + MLT1I LTR MaLR 85 291 -118 2141 99 41 0 chr20 22998719 22999011 -43668994 - AluSx SINE Alu -8 304 1 352 142 0 151 chr20 22999472 22999578 -43668427 + MLT1F1 LTR MaLR 49 138 -429 2367 182 65 17 chr20 22999578 23000124 -43667881 + L1MD3 LINE L1 6136 6334 -10 403 258 153 11 chr20 23000363 23000553 -43667452 - MER113 DNA MER1_type? -137 384 168 800 217 22 5 chr20 23000553 23000737 -43667268 + AluJb SINE Alu 120 306 -6 264 208 52 10 chr20 23000740 23000836 -43667169 - MER113 DNA MER1_type? -361 160 61 195 42 0 0 chr20 23001234 23001258 -43666747 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 9054 20 0 1 chr20 23001261 23003050 -43664955 - L1PA7 LINE L1 -13 6141 4351 4029 18 2 0 chr20 23003050 23003504 -43664501 + L1PA7 LINE L1 3895 4349 -1797 1237 49 0 0 chr20 23003533 23003676 -43664329 + AluSg/x SINE Alu 158 300 -10 825 329 63 2 chr20 23003686 23004257 -43663748 + L1M4 LINE L1 4563 5168 -978 1552 179 19 0 chr20 23004258 23004520 -43663485 + AluJb SINE Alu 1 267 -45 647 198 6 22 chr20 23004523 23004705 -43663300 + GA-rich Low_complexity Low_complexity 2 180 0 285 271 37 28 chr20 23004716 23004823 -43663182 + L1M4 LINE L1 5170 5277 -869 2421 80 7 0 chr20 23004835 23005134 -43662871 + AluY SINE Alu 1 301 -10 1065 169 91 85 chr20 23005461 23005684 -43662321 + MER33 DNA MER1_type 4 231 -2354 2365 104 7 0 chr20 23005684 23005993 -43662012 - AluSp SINE Alu -2 311 1 1065 169 91 85 chr20 23005993 23006088 -43661917 + MER33 DNA MER1_type 231 324 0 1500 189 0 54 chr20 23006477 23006809 -43661196 + AluJb SINE Alu 1 316 0 354 204 282 0 chr20 23007433 23007536 -43660469 + HsTC2 DNA Tc2 1 132 -1766 * 834 246 37 25 chr20 23007532 23007776 -43660229 + HsTC2 DNA Tc2 1292 1714 -184 5210 135 20 29 chr20 23007791 23008007 -43659998 - L1MB3 LINE L1 -1 6182 5966 2178 123 0 22 chr20 23008007 23008323 -43659682 - AluSx SINE Alu -3 309 1 5210 135 20 29 chr20 23008323 23008827 -43659178 - L1MB3 LINE L1 -217 5966 5469 2472 115 22 0 chr20 23008827 23009183 -43658822 - THE1B LTR MaLR 0 364 1 5210 135 20 29 chr20 23009183 23009358 -43658647 - L1MB3 LINE L1 -714 5469 5294 589 208 22 77 chr20 23009371 23009523 -43658482 + HsTC2 DNA Tc2 1720 1863 -35 2137 130 0 0 chr20 23009523 23009856 -43658149 - AluSx SINE Alu 0 333 1 589 208 22 77 chr20 23009856 23009885 -43658120 + HsTC2 DNA Tc2 1863 1892 -6 25 0 0 0 chr20 23009935 23009960 -43658045 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr20 23009992 23010022 -43657983 + AT_rich Low_complexity Low_complexity 1 30 0 2262 115 20 0 chr20 23010330 23010670 -43657335 - AluSx SINE Alu 0 346 1 466 222 34 17 chr20 23010836 23010953 -43657052 - LTR67 LTR ERVL -7 550 432 275 311 11 11 chr20 23011150 23011240 -43656765 - LTR67 LTR ERVL -355 202 113 1512 170 119 0 chr20 23011398 23011675 -43656330 + AluJb SINE Alu 1 310 -2 548 153 8 23 chr20 23011679 23011810 -43656195 + GA-rich Low_complexity Low_complexity 3 131 0 496 104 39 0 chr20 23012186 23012263 -43655742 - MADE1 DNA Mariner 0 80 1 410 208 109 3 chr20 23012435 23012543 -43655462 - L1ME2 LINE L1 -4 6330 6052 305 264 11 0 chr20 23012578 23012669 -43655336 + LTR30 LTR ERV1 552 643 -79 833 239 95 8 chr20 23012881 23013122 -43654883 - MLT1H1 LTR MaLR -298 257 32 428 196 106 2 chr20 23013399 23013507 -43654498 + L1ME2 LINE L1 6052 6330 -4 283 256 24 49 chr20 23015155 23015237 -43652768 - LTR67 LTR ERVL -364 193 114 230 97 0 0 chr20 23015212 23015243 -43652762 - MLT1J LTR MaLR -377 134 104 * 274 283 43 58 chr20 23016951 23017089 -43650916 - L2 LINE L2 0 3272 3137 384 237 138 101 chr20 23017100 23017534 -43650471 - MLT1J2 LTR MaLR 0 450 1 29 60 0 0 chr20 23018264 23018314 -43649691 + AT_rich Low_complexity Low_complexity 1 50 0 2439 146 30 0 chr20 23018314 23019425 -43648580 - L1PA15 LINE L1 -53 6112 4883 485 235 143 43 chr20 23019693 23020097 -43647908 + MLT1G LTR MaLR 68 594 -1 1787 177 3 0 chr20 23020473 23020755 -43647250 + AluJb SINE Alu 1 283 -29 793 211 32 11 chr20 23022910 23023095 -43644910 - MER5A DNA MER1_type 0 189 1 2586 55 0 13 chr20 23023377 23023687 -43644318 + AluY SINE Alu 1 306 -5 1826 138 71 0 chr20 23023693 23023976 -43644029 + AluSx SINE Alu 1 303 -9 2133 134 0 25 chr20 23024284 23024604 -43643401 + AluSx SINE Alu 1 312 0 1091 189 21 75 chr20 23024787 23024987 -43643018 + L1MC4 LINE L1 6814 6996 -1046 1871 122 26 45 chr20 23024987 23025298 -43642707 + AluJo SINE Alu 1 305 -7 1091 189 21 75 chr20 23025298 23025377 -43642628 + L1MC4 LINE L1 6996 7078 -964 336 48 0 0 chr20 23025384 23025426 -43642579 + (TG)n Simple_repeat Simple_repeat 1 42 0 223 238 41 34 chr20 23025436 23025583 -43642422 + (CATATA)n Simple_repeat Simple_repeat 6 153 0 * 289 223 12 60 chr20 23025516 23025682 -43642323 + (TATAA)n Simple_repeat Simple_repeat 3 160 0 260 207 83 24 chr20 23025594 23025763 -43642242 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 * 275 65 87 0 chr20 23025768 23025814 -43642191 - L1MC4 LINE L1 -898 7144 7095 2114 124 0 0 chr20 23025814 23026127 -43641878 + AluSx SINE Alu 1 313 0 297 122 0 0 chr20 23026148 23026197 -43641808 + L1MC4 LINE L1 7128 7176 -866 2285 125 0 3 chr20 23026197 23026648 -43641357 + AluSx SINE Alu 1 450 0 3066 231 49 26 chr20 23026648 23027346 -43640659 + L1MC4 LINE L1 7141 7808 -187 2334 135 32 56 chr20 23027346 23027396 -43640609 - MSTB1 LTR MaLR 0 432 382 1626 170 38 35 chr20 23027396 23027685 -43640320 - AluSx SINE Alu -22 290 1 2334 135 32 56 chr20 23027685 23028077 -43639928 - MSTB1 LTR MaLR -50 382 1 3066 231 49 26 chr20 23028077 23028268 -43639737 + L1MC4 LINE L1 7808 7993 -2 1894 133 3 71 chr20 23029777 23029947 -43638058 - AluJo SINE Alu -10 302 122 10577 52 6 0 chr20 23029947 23032015 -43635990 - L1PA5 LINE L1 -4 6150 4077 1894 133 3 71 chr20 23032015 23032029 -43635976 - AluJo SINE Alu -190 122 109 1924 106 6 90 chr20 23032029 23032377 -43635628 - AluSx SINE Alu 0 322 1 1894 133 3 71 chr20 23032377 23032514 -43635491 - AluJo SINE Alu -203 109 1 398 196 65 0 chr20 23032516 23032623 -43635382 + L2 LINE L2 1988 2101 -1213 1790 95 4 0 chr20 23032625 23032857 -43635148 - AluSp SINE Alu -16 297 65 378 263 1 37 chr20 23033038 23033150 -43634855 + MIR SINE MIR 49 156 -64 2189 69 44 0 chr20 23033155 23033429 -43634576 - AluSc SINE Alu -23 286 1 1331 285 108 0 chr20 23033430 23033921 -43634084 + L2 LINE L2 2093 2636 -678 1127 275 138 24 chr20 23033921 23034383 -43633622 - MLT1G1 LTR MaLR 0 595 81 1666 186 0 28 chr20 23034486 23034804 -43633201 + AluJo SINE Alu 1 309 -3 316 352 51 19 chr20 23034866 23035082 -43632923 + L2 LINE L2 2830 3052 -261 613 204 34 27 chr20 23035083 23035230 -43632775 + L1ME2 LINE L1 5932 6079 -85 812 242 114 29 chr20 23035233 23035559 -43632446 - MLT1G LTR MaLR -2 588 163 279 0 0 0 chr20 23035606 23035637 -43632368 + (GA)n Simple_repeat Simple_repeat 1 31 0 332 263 70 59 chr20 23035656 23035763 -43632242 - MLT1G LTR MaLR -379 188 77 2126 128 3 7 chr20 23035763 23036069 -43631936 + AluSx SINE Alu 1 305 -7 332 263 70 59 chr20 23036069 23036147 -43631858 - MLT1G LTR MaLR -490 77 1 269 253 48 0 chr20 23036147 23036230 -43631775 + L1ME2 LINE L1 6077 6163 -1 1975 154 0 0 chr20 23036241 23036553 -43631452 + AluSx SINE Alu 1 312 0 1415 164 16 35 chr20 23036555 23036811 -43631194 + AluJo SINE Alu 1 251 -61 263 237 71 150 chr20 23036813 23037066 -43630939 + L2 LINE L2 3081 3313 0 297 336 10 0 chr20 23037218 23037322 -43630683 - MIR3 SINE MIR -23 185 81 235 224 0 0 chr20 23038610 23038659 -43629346 + L2 LINE L2 3220 3268 -4 2254 109 20 0 chr20 23038715 23039018 -43628987 + AluSx SINE Alu 3 311 -1 1205 49 0 0 chr20 23039483 23039627 -43628378 - L1PA4 LINE L1 -3 6152 6009 827 43 0 0 chr20 23039627 23039721 -43628284 - AluY SINE Alu -13 298 205 4352 130 66 82 chr20 23039721 23040726 -43627279 + pTR5 LTR ERV1 743 2020 -418 304 257 46 18 chr20 23040729 23040838 -43627167 + LTR30 LTR ERV1 544 655 -67 1439 95 5 5 chr20 23040840 23041050 -43626955 + pTR5 LTR ERV1 181 390 -2048 1698 77 0 0 chr20 23041052 23041259 -43626746 - AluY SINE Alu -103 208 2 2138 225 62 40 chr20 23041334 23041935 -43626070 + L1ME1 LINE L1 5548 6161 -5 180 77 0 0 chr20 23042149 23042175 -43625830 + (GA)n Simple_repeat Simple_repeat 2 27 0 342 207 37 12 chr20 23043498 23043580 -43624425 - MER103 DNA DNA -81 85 2 1971 125 47 10 chr20 23043682 23043978 -43624027 - AluJb SINE Alu -5 307 1 2385 180 78 10 chr20 23044337 23044827 -43623178 - Charlie1b DNA MER1_type 0 523 1 557 241 108 31 chr20 23045303 23045498 -43622507 + MLT1J1 LTR MaLR 1 210 -236 265 228 0 18 chr20 23045612 23045669 -43622336 + MLT1I LTR MaLR 345 400 -9 805 189 91 0 chr20 23045968 23046111 -43621894 + AluJb SINE Alu 142 297 -15 466 167 19 9 chr20 23046120 23046228 -43621777 + GA-rich Low_complexity Low_complexity 1 109 0 409 204 91 0 chr20 23046415 23046503 -43621502 - MIR SINE MIR -71 191 96 885 173 152 11 chr20 23046507 23046698 -43621307 - MLT2D LTR ERVL 0 414 197 649 91 11 0 chr20 23046699 23046787 -43621218 - ERVL-D LTR ERVL -2012 3752 3664 * 2712 219 42 7 chr20 23046770 23047937 -43620068 - ERVL-D LTR ERVL -4477 1287 1 1215 214 77 17 chr20 23047944 23048243 -43619762 - MLT2D LTR ERVL -7 407 91 1061 173 0 0 chr20 23048596 23048769 -43619236 - FRAM SINE Alu -3 173 1 2430 87 0 0 chr20 23049184 23049484 -43618521 + AluSc SINE Alu 1 300 -9 2177 109 13 0 chr20 23049677 23049979 -43618026 + AluSx SINE Alu 1 306 -6 409 287 127 6 chr20 23050523 23050680 -43617325 + MIR SINE MIR 79 254 -8 263 315 79 28 chr20 23053097 23053275 -43614730 - HAL1 LINE L1 -568 1939 1753 1853 146 17 3 chr20 23053289 23053583 -43614422 - AluSx SINE Alu -14 298 1 781 132 23 0 chr20 23053601 23053730 -43614275 - AluSq/x SINE Alu -179 133 2 2068 61 0 25 chr20 23053761 23054038 -43613967 - AluY SINE Alu 0 311 42 509 260 5 81 chr20 23054048 23054164 -43613841 - HAL1 LINE L1 -815 1692 1600 2306 90 7 0 chr20 23054164 23054464 -43613541 - AluSx SINE Alu -10 302 1 509 260 5 81 chr20 23054464 23054570 -43613435 - HAL1 LINE L1 -907 1600 1487 200 231 165 50 chr20 23054579 23054700 -43613305 - MIR SINE MIR -5 257 123 2283 78 7 0 chr20 23054757 23055041 -43612964 + AluSc SINE Alu 1 286 -23 369 274 3 36 chr20 23055046 23055158 -43612847 - MIR SINE MIR -64 144 49 251 295 72 43 chr20 23055196 23055403 -43612602 - HAL1 LINE L1 -1036 1471 1259 297 175 0 16 chr20 23055501 23055564 -43612441 - L1MA9 LINE L1 0 6312 6251 574 150 20 30 chr20 23055564 23055664 -43612341 - FRAM SINE Alu -14 162 64 2445 222 89 36 chr20 23055673 23055954 -43612051 - L1ME1 LINE L1 -68 6909 6644 2110 83 4 0 chr20 23055954 23056218 -43611787 - AluSx SINE Alu 0 312 48 2445 222 89 36 chr20 23056218 23056959 -43611046 - L1ME1 LINE L1 -333 6644 5833 2985 224 148 84 chr20 23056967 23057378 -43610627 - L1ME1 LINE L1 -2254 4703 4320 192 77 0 0 chr20 23057378 23057404 -43610601 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2985 224 148 84 chr20 23057404 23057461 -43610544 - L1ME1 LINE L1 -2637 4320 4268 1498 98 79 9 chr20 23057461 23057676 -43610329 - MER30 DNA MER1_type 0 230 1 2985 224 148 84 chr20 23057676 23058764 -43609241 - L1ME1 LINE L1 -2689 4268 3060 2318 73 0 22 chr20 23058764 23059080 -43608925 - AluY SINE Alu -2 309 1 2985 224 148 84 chr20 23059080 23059132 -43608873 - L1ME1 LINE L1 -3897 3060 3013 2962 147 108 13 chr20 23059122 23059679 -43608326 - L1MB4 LINE L1 -1 6179 5570 * 712 159 32 82 chr20 23059682 23059735 -43608270 - L1ME1 LINE L1 -4102 3036 2982 1822 145 3 26 chr20 23059735 23060038 -43607967 + AluSx SINE Alu 1 296 -16 712 159 32 82 chr20 23060038 23060144 -43607861 - L1ME1 LINE L1 -4156 2982 2888 1880 72 111 43 chr20 23060144 23060423 -43607582 - AluY SINE Alu -13 298 1 712 159 32 82 chr20 23060423 23060482 -43607523 - L1ME1 LINE L1 -4250 2888 2828 2099 114 27 3 chr20 23060632 23060929 -43607076 - AluSx SINE Alu -6 306 3 687 254 263 21 chr20 23060939 23061270 -43606735 - MER57B LTR ERV1 -23 411 1 1067 224 15 0 chr20 23061326 23061527 -43606478 + MER82 DNA MER2_type 449 652 -1 3023 178 30 20 chr20 23061938 23062540 -43605465 - L1MB8 LINE L1 -2 6245 5638 1381 159 14 0 chr20 23062540 23062754 -43605251 - AluJo SINE Alu -36 276 60 433 133 0 0 chr20 23062754 23062814 -43605191 - L1MB8 LINE L1 -623 5630 5571 2043 192 17 128 chr20 23062814 23063345 -43604660 - MER70A LTR ERVL 0 472 1 2665 158 49 80 chr20 23063345 23063531 -43604474 - L1MB8 LINE L1 -668 5575 5385 1828 155 0 17 chr20 23063531 23063827 -43604178 - AluSq SINE Alu -22 291 1 2665 158 49 80 chr20 23063827 23064002 -43604003 - L1MB8 LINE L1 -858 5385 5206 2338 92 0 3 chr20 23064002 23064305 -43603700 + AluSq SINE Alu 3 304 -9 2665 158 49 80 chr20 23064305 23064715 -43603290 - L1MB8 LINE L1 -1037 5206 4822 7294 218 80 48 chr20 23064730 23065539 -43602466 - L1MB8 LINE L1 -1560 4655 3874 2225 170 9 0 chr20 23065539 23065880 -43602125 + MER2 DNA MER2_type 1 344 0 7294 218 80 48 chr20 23065880 23067804 -43600201 - L1MB8 LINE L1 -2341 3874 1883 375 238 50 32 chr20 23068075 23068261 -43599744 - L1ME1 LINE L1 -4589 2368 2185 2296 75 0 0 chr20 23068294 23068628 -43599377 - AluY SINE Alu 0 334 1 1740 89 9 5 chr20 23068631 23068855 -43599150 - AluSg/x SINE Alu -17 293 69 486 289 28 17 chr20 23068864 23069044 -43598961 - L1ME1 LINE L1 -5880 979 798 1549 183 49 3 chr20 23069046 23069331 -43598674 - AluJb SINE Alu -13 299 2 441 0 0 0 chr20 23069331 23069380 -43598625 + (TG)n Simple_repeat Simple_repeat 2 50 0 1105 218 53 15 chr20 23069380 23069642 -43598363 - AluJo SINE Alu -35 277 6 599 199 151 7 chr20 23069741 23069887 -43598118 - L1ME1 LINE L1 -6691 168 2 691 252 81 24 chr20 23070010 23070256 -43597749 + MIR SINE MIR 3 262 0 180 0 0 0 chr20 23071321 23071341 -43596664 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 674 213 14 0 chr20 23071842 23071983 -43596022 + MER58A DNA MER1_type 46 188 -36 844 208 0 0 chr20 23072681 23072825 -43595180 - FRAM SINE Alu -30 146 3 1559 199 42 24 chr20 23072843 23073179 -43594826 - L1MB7 LINE L1 -9 6175 5834 367 347 98 15 chr20 23073801 23074066 -43593939 - L2 LINE L2 -604 2710 2424 221 325 0 0 chr20 23075695 23075772 -43592233 + (TA)n Simple_repeat Simple_repeat 1 77 0 378 0 0 0 chr20 23077886 23077928 -43590077 + (TG)n Simple_repeat Simple_repeat 2 43 0 2110 109 0 3 chr20 23078030 23078335 -43589670 + AluSx SINE Alu 1 304 0 21 0 0 0 chr20 23078983 23079004 -43589001 + AT_rich Low_complexity Low_complexity 1 21 0 351 0 0 0 chr20 23079429 23079468 -43588537 + (CA)n Simple_repeat Simple_repeat 1 39 0 23 0 0 0 chr20 23079754 23079777 -43588228 + AT_rich Low_complexity Low_complexity 1 23 0 398 147 27 0 chr20 23080514 23080589 -43587416 - L1MB4 LINE L1 -5 6175 6099 693 161 67 13 chr20 23081241 23081390 -43586615 + MER58C DNA MER1_type 59 215 0 531 315 88 38 chr20 23082752 23083149 -43584856 - L2 LINE L2 -858 2456 2040 262 258 0 15 chr20 23084018 23084084 -43583921 + Charlie4 DNA MER1_type 1884 1948 -13 2087 127 0 10 chr20 23084207 23084506 -43583499 + AluSx SINE Alu 1 296 -16 2538 250 162 23 chr20 23084594 23085667 -43582338 - L2 LINE L2 -1 3312 2029 916 87 87 0 chr20 23085667 23085794 -43582211 - MER85 DNA T2_type -1 138 1 2538 250 162 23 chr20 23085794 23086012 -43581993 - L2 LINE L2 -1284 2029 1843 207 0 0 0 chr20 23086712 23086735 -43581270 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1171 156 0 0 chr20 23088168 23088341 -43579664 + AluSg/x SINE Alu 125 297 -13 289 163 0 0 chr20 23089119 23089162 -43578843 + Alu SINE Alu 248 290 -12 564 260 52 74 chr20 23090666 23090897 -43577108 - MIR SINE MIR 0 262 37 28 33 0 49 chr20 23091302 23091363 -43576642 + AT_rich Low_complexity Low_complexity 1 58 0 206 198 12 49 chr20 23091615 23091696 -43576309 + (TTATA)n Simple_repeat Simple_repeat 4 81 0 26 50 0 0 chr20 23091816 23091856 -43576149 + AT_rich Low_complexity Low_complexity 1 40 0 254 277 12 0 chr20 23093766 23093849 -43574156 + (TA)n Simple_repeat Simple_repeat 2 85 0 2246 113 3 0 chr20 23094637 23094946 -43573059 - AluSg SINE Alu 0 310 1 2268 91 7 0 chr20 23096665 23096972 -43571033 - AluY SINE Alu -2 309 1 1330 153 0 0 chr20 23097576 23097799 -43570206 + AluJb SINE Alu 87 309 0 2568 48 0 0 chr20 23098274 23098583 -43569422 + AluY SINE Alu 1 309 -2 2994 186 60 3 chr20 23099247 23100040 -43567965 - L1M3 LINE L1 -645 5538 4701 23 68 0 0 chr20 23100099 23100143 -43567862 + AT_rich Low_complexity Low_complexity 1 44 0 2190 97 0 10 chr20 23100361 23100660 -43567345 - AluSx SINE Alu -16 296 1 296 356 87 0 chr20 23100760 23100864 -43567141 - MIR SINE MIR -146 116 4 253 86 100 0 chr20 23101144 23101214 -43566791 + (TA)n Simple_repeat Simple_repeat 1 77 0 303 282 94 0 chr20 23101216 23101301 -43566704 + L1MC4 LINE L1 6617 6709 -1333 1884 161 0 13 chr20 23101541 23101840 -43566165 + AluJo SINE Alu 4 298 -14 23 33 0 0 chr20 23102266 23102296 -43565709 + AT_rich Low_complexity Low_complexity 1 30 0 190 328 0 0 chr20 23102389 23102450 -43565555 - MIR SINE MIR -57 151 91 1072 121 99 17 chr20 23103734 23103966 -43564039 - L1MA4 LINE L1 -3 6297 6047 26 30 0 0 chr20 23103973 23104006 -43563999 + AT_rich Low_complexity Low_complexity 1 33 0 834 152 38 0 chr20 23104249 23104407 -43563598 - L1MB4 LINE L1 -6 6174 6011 725 169 113 12 chr20 23104415 23104602 -43563403 - L1MB4 LINE L1 -336 5838 5633 216 224 61 0 chr20 23104832 23104881 -43563124 + MIR SINE MIR 41 92 -170 1284 178 220 31 chr20 23104881 23105303 -43562702 + Charlie1b DNA MER1_type 20 521 -2 510 310 43 19 chr20 23105310 23105568 -43562437 - L1MB4 LINE L1 -513 5651 5388 1853 132 38 14 chr20 23107277 23107566 -43560439 + AluSx SINE Alu 1 296 -16 652 226 12 54 chr20 23110766 23110934 -43557071 + MER105 DNA DNA 2 162 -42 1926 72 0 0 chr20 23111966 23112203 -43555802 - AluY SINE Alu -19 292 56 229 267 24 37 chr20 23112251 23112369 -43555636 - L1ME LINE L1 -322 5799 5679 1856 157 7 0 chr20 23112554 23112848 -43555157 + AluJb SINE Alu 3 298 -14 493 96 70 0 chr20 23113827 23113983 -43554022 + (TA)n Simple_repeat Simple_repeat 1 167 0 606 78 39 30 chr20 23114036 23114269 -43553736 + (TA)n Simple_repeat Simple_repeat 1 235 0 2143 93 0 40 chr20 23114293 23114617 -43553388 + AluY SINE Alu 1 311 0 394 287 50 0 chr20 23115071 23115252 -43552753 - L1ME LINE L1 -679 5485 5296 547 264 73 69 chr20 23115484 23115745 -43552260 + MIR SINE MIR 1 262 0 6546 123 46 4 chr20 23116803 23118373 -43549632 - L1MA3 LINE L1 -6 6299 4663 32 43 0 0 chr20 23120479 23120525 -43547480 + AT_rich Low_complexity Low_complexity 1 46 0 1980 246 72 57 chr20 23120690 23121029 -43546976 - L1ME3A LINE L1 -4 6166 5833 2030 138 10 0 chr20 23121029 23121334 -43546671 - AluSg SINE Alu -1 309 2 1980 246 72 57 chr20 23121334 23121984 -43546021 - L1ME3A LINE L1 -337 5833 5160 475 152 65 0 chr20 23121984 23122076 -43545929 + L1MC4 LINE L1 7945 8042 0 2254 264 78 50 chr20 23122138 23123610 -43544395 - L1ME3A LINE L1 -1774 4372 2860 551 291 11 33 chr20 23123656 23123838 -43544167 - L1ME LINE L1 -459 5662 5485 2338 50 0 0 chr20 23123838 23124165 -43543840 - AluY SINE Alu 0 327 1 261 108 0 0 chr20 23124192 23124229 -43543776 + Alu SINE Alu 1 37 -266 886 143 20 7 chr20 23124233 23124380 -43543625 + FRAM SINE Alu 1 146 -30 1963 137 13 3 chr20 23125285 23125585 -43542420 - AluSx SINE Alu -9 303 1 378 327 77 19 chr20 23126492 23126648 -43541357 + MIR SINE MIR 77 241 -21 330 26 0 0 chr20 23129731 23129770 -43538235 + (CA)n Simple_repeat Simple_repeat 2 40 0 523 296 28 17 chr20 23131384 23131560 -43536445 - MIR SINE MIR 0 262 85 1706 168 3 7 chr20 23132534 23132819 -43535186 - AluJb SINE Alu -28 284 1 23 68 0 0 chr20 23133031 23133075 -43534930 + AT_rich Low_complexity Low_complexity 1 44 0 299 286 163 14 chr20 23136149 23136296 -43531709 - MIR3 SINE MIR -25 183 15 308 218 121 100 chr20 23145373 23145653 -43522352 - L1M2 LINE L1 -5706 1143 858 321 269 81 122 chr20 23146113 23146622 -43521383 + L1M2 LINE L1 717 1204 -5645 31 0 0 0 chr20 23149754 23149785 -43518220 + AT_rich Low_complexity Low_complexity 1 31 0 227 229 42 0 chr20 23149933 23149981 -43518024 - L1MC/D LINE L1 -1884 5924 5875 33 56 0 0 chr20 23152790 23152844 -43515161 + AT_rich Low_complexity Low_complexity 1 54 0 25 90 0 0 chr20 23153033 23153100 -43514905 + AT_rich Low_complexity Low_complexity 1 67 0 2481 61 0 0 chr20 23154347 23154642 -43513363 + AluY SINE Alu 17 311 0 329 311 97 15 chr20 23154664 23154860 -43513145 - L3 LINE CR1 -169 1408 1197 2239 161 97 0 chr20 23155042 23155433 -43512572 + MSTB1 LTR MaLR 1 429 -3 226 185 0 74 chr20 23155546 23155627 -43512378 + L1MCa LINE L1 2006 2080 -4346 1976 138 3 3 chr20 23155922 23156212 -43511793 - AluSx SINE Alu -22 290 1 1734 186 13 0 chr20 23156424 23156730 -43511275 - AluJb SINE Alu -2 310 1 1102 210 84 52 chr20 23156895 23157008 -43510997 - MER33 DNA MER1_type -2261 324 216 888 126 0 37 chr20 23157008 23157143 -43510862 + FLAM_C SINE Alu 1 130 -3 1102 210 84 52 chr20 23157143 23157339 -43510666 - MER33 DNA MER1_type -2369 216 5 1794 188 52 0 chr20 23157351 23157675 -43510330 + MER58B DNA MER1_type 1 341 0 274 250 50 0 chr20 23157987 23158000 -43510005 - L1MC/D LINE L1 -287 5834 5823 1586 147 16 67 chr20 23158000 23158314 -43509691 - AluJo SINE Alu -14 298 1 274 250 50 0 chr20 23158314 23158423 -43509582 - L1MC/D LINE L1 -298 5823 5719 471 226 96 92 chr20 23158445 23158567 -43509438 - L1MC/D LINE L1 -376 5745 5625 1686 191 0 3 chr20 23158567 23158870 -43509135 - AluJo SINE Alu -10 302 1 471 226 96 92 chr20 23158870 23159008 -43508997 - L1MC/D LINE L1 -496 5625 5484 2017 98 84 3 chr20 23159326 23159611 -43508394 + AluSx SINE Alu 1 308 -4 275 244 69 36 chr20 23159626 23159728 -43508277 + MIR SINE MIR 54 160 -48 1986 153 59 28 chr20 23159842 23160233 -43507772 - L1MA5 LINE L1 0 7002 6600 11400 154 63 87 chr20 23160235 23162272 -43505733 - L1MA5 LINE L1 -816 6032 3850 1015 190 0 77 chr20 23162272 23162493 -43505512 - AluJo SINE Alu -23 289 86 11400 154 63 87 chr20 23162493 23162962 -43505043 - L1MA5 LINE L1 -2998 3850 3371 28323 118 15 75 chr20 23162963 23168107 -43499898 + L1P LINE L1 12 4845 -1301 3685 38 0 2 chr20 23168107 23168522 -43499483 + L1PA6 LINE L1 5735 6150 -4 955 80 22 0 chr20 23168536 23168673 -43499332 + L1MB3 LINE L1 6044 6183 0 3022 77 3 10 chr20 23168689 23169078 -43498927 + L1PA7 LINE L1 5769 6154 0 2305 168 34 23 chr20 23169079 23169691 -43498314 - L1MA5 LINE L1 -3453 3395 2763 1607 175 53 0 chr20 23169691 23169847 -43498158 - AluJb SINE Alu -25 287 110 381 93 0 0 chr20 23169847 23169901 -43498104 + (TG)n Simple_repeat Simple_repeat 1 54 0 1607 175 53 0 chr20 23169901 23170007 -43497998 - AluJb SINE Alu -202 110 11 2305 168 34 23 chr20 23170007 23170467 -43497538 - L1MA5 LINE L1 -4085 2763 2310 972 191 0 6 chr20 23170469 23170637 -43497368 - AluJ SINE Alu -16 296 130 228 67 0 0 chr20 23170639 23170669 -43497336 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 1604 157 30 11 chr20 23170678 23170946 -43497059 - AluSx SINE Alu -39 273 1 850 183 0 29 chr20 23170946 23171083 -43496922 - AluJ SINE Alu -176 136 4 676 224 11 11 chr20 23171091 23171265 -43496740 - L1MA5 LINE L1 -4530 2319 2146 518 184 13 26 chr20 23171270 23171422 -43496583 + C-rich Low_complexity Low_complexity 5 154 0 517 246 189 17 chr20 23171425 23171600 -43496405 - AluJo SINE Alu 0 312 108 2272 129 116 35 chr20 23171600 23171996 -43496009 - MSTA LTR MaLR 0 428 1 9898 132 13 36 chr20 23172030 23173640 -43494365 - MSTA-int LTR MaLR -5 1575 3 2390 125 128 13 chr20 23173642 23174026 -43493979 - MSTA LTR MaLR 0 428 1 769 139 0 0 chr20 23174029 23174137 -43493868 - AluJo SINE Alu -203 109 2 2926 198 106 35 chr20 23174140 23174238 -43493767 - L1MA5 LINE L1 -4665 2184 2094 1033 126 0 161 chr20 23174238 23174468 -43493537 - 7SK RNA RNA 0 193 1 2926 198 106 35 chr20 23174468 23174721 -43493284 - L1MA5 LINE L1 -4755 2094 1861 1541 117 0 0 chr20 23174721 23174927 -43493078 - AluSg/x SINE Alu -19 293 88 2926 198 106 35 chr20 23174927 23175439 -43492566 - L1MA5 LINE L1 -4988 1861 1258 270 253 152 20 chr20 23176356 23176455 -43491550 + MIR3 SINE MIR 45 156 -52 667 216 0 9 chr20 23176614 23176730 -43491275 + FLAM_A SINE Alu 2 116 -17 312 302 167 32 chr20 23176765 23177113 -43490892 + L1ME LINE L1 5337 5731 -390 2225 189 138 49 chr20 23177565 23177805 -43490200 - L1MCb LINE L1 -4835 1729 1512 2213 113 3 0 chr20 23177805 23178098 -43489907 - AluSx SINE Alu -18 294 1 2225 189 138 49 chr20 23178098 23178522 -43489483 - L1MCb LINE L1 -5052 1512 1127 2283 108 0 16 chr20 23178522 23178836 -43489169 - AluSq SINE Alu -4 309 1 2225 189 138 49 chr20 23178836 23179160 -43488845 - L1MCb LINE L1 -5437 1127 630 1645 262 21 36 chr20 23179276 23179802 -43488203 - L1MCb LINE L1 -5407 638 121 2481 75 7 0 chr20 23180425 23180732 -43487273 - AluSq SINE Alu -4 309 1 195 245 61 51 chr20 23180895 23180993 -43487012 - MIR SINE MIR -102 160 62 2010 134 22 0 chr20 23181043 23181345 -43486660 - AluSx SINE Alu 0 308 1 535 259 14 0 chr20 23181354 23181497 -43486508 - L1ME1 LINE L1 -2 6164 6020 * 591 234 101 82 chr20 23181495 23181752 -43486253 - L1M4 LINE L1 -1098 5048 4787 717 268 119 64 chr20 23183602 23183839 -43484166 - L1ME1 LINE L1 -301 5820 5598 2383 70 0 10 chr20 23183839 23184137 -43483868 + AluY SINE Alu 1 295 -16 717 268 119 64 chr20 23184137 23184581 -43483424 - L1ME1 LINE L1 -523 5598 5106 23 0 0 0 chr20 23184598 23184621 -43483384 + AT_rich Low_complexity Low_complexity 1 23 0 1866 196 55 18 chr20 23185036 23185107 -43482898 - LTR52 LTR ERVL -3 418 351 249 33 0 0 chr20 23185107 23185137 -43482868 + (CA)n Simple_repeat Simple_repeat 2 31 0 1866 196 55 18 chr20 23185137 23185464 -43482541 - LTR52 LTR ERVL -70 351 5 1473 189 180 3 chr20 23187559 23187893 -43480112 + MLT2C1 LTR ERVL 1 393 -4 610 188 9 0 chr20 23187914 23188026 -43479979 - Tigger5 DNA MER2_type 0 2323 2211 2302 115 0 6 chr20 23188041 23188355 -43479650 + AluSx SINE Alu 1 312 0 1529 190 19 35 chr20 23188498 23188809 -43479196 - AluJo SINE Alu -1 311 6 2321 96 0 0 chr20 23189452 23189745 -43478260 - AluSx SINE Alu -19 293 1 199 333 60 24 chr20 23189752 23189836 -43478169 - L2 LINE L2 -16 3256 3170 1814 233 102 19 chr20 23189930 23190579 -43477426 - L1ME1 LINE L1 -1267 4879 4177 2195 222 28 41 chr20 23190596 23190846 -43477159 + L1ME1 LINE L1 3815 4067 -2079 2167 113 10 10 chr20 23190846 23191156 -43476849 + AluSg SINE Alu 1 310 0 2195 222 28 41 chr20 23191156 23191584 -43476421 + L1ME1 LINE L1 4067 4484 -1662 2429 91 0 0 chr20 23191592 23191900 -43476105 + AluSg SINE Alu 1 308 -2 533 165 127 32 chr20 23191902 23192060 -43475945 + L1ME1 LINE L1 4991 5163 -983 * 996 194 128 83 chr20 23192048 23192471 -43475534 + L1ME1 LINE L1 5723 6164 -2 396 301 107 27 chr20 23192482 23192848 -43475157 - L1MC/D LINE L1 -2159 5649 5255 296 193 23 53 chr20 23193335 23193434 -43474571 + LTR16A1 LTR ERVL 150 244 -206 2830 60 0 11 chr20 23193579 23193946 -43474059 + L1PA7 LINE L1 5788 6150 -4 2230 92 0 0 chr20 23193999 23194304 -43473701 + AluSg SINE Alu 1 305 0 443 266 179 0 chr20 23194320 23194493 -43473512 + LTR16A LTR ERVL 241 444 -6 303 244 47 71 chr20 23194881 23195008 -43472997 - L1MDa LINE L1 -3961 2579 2456 26 30 0 0 chr20 23195267 23195300 -43472705 + AT_rich Low_complexity Low_complexity 1 33 0 1985 108 4 8 chr20 23195446 23195714 -43472291 - AluSx SINE Alu -14 298 32 2191 216 75 9 chr20 23196101 23196778 -43471227 - L1MC/D LINE L1 -1517 4629 3908 477 118 82 0 chr20 23196790 23196875 -43471130 - AluSg/x SINE Alu -8 304 213 543 217 91 59 chr20 23196877 23196966 -43471039 - L1MC/D LINE L1 -2161 3985 3900 1702 161 28 14 chr20 23196966 23197257 -43470748 - AluSx SINE Alu -17 295 1 543 217 91 59 chr20 23197257 23197388 -43470617 - L1MC/D LINE L1 -2246 3900 3758 423 83 0 0 chr20 23197608 23197668 -43470337 + (TCTA)n Simple_repeat Simple_repeat 3 62 0 2030 223 69 37 chr20 23197673 23197784 -43470221 - L1MC4a LINE L1 -743 5403 5297 1647 154 33 30 chr20 23197784 23198083 -43469922 - AluJo SINE Alu -2 310 11 2030 223 69 37 chr20 23198083 23198722 -43469283 - L1MC4a LINE L1 -849 5297 5149 2632 52 0 0 chr20 23198829 23199138 -43468867 - AluY SINE Alu -2 309 1 3329 241 27 29 chr20 23199714 23200745 -43467260 + L1MC4 LINE L1 6440 7468 -574 1496 131 27 5 chr20 23200910 23201132 -43466873 - MER30 DNA MER1_type 0 230 4 2215 113 3 3 chr20 23201433 23201735 -43466270 - AluSq SINE Alu -11 302 1 1829 146 0 39 chr20 23202429 23202737 -43465268 - AluJb SINE Alu -16 296 1 468 207 68 44 chr20 23202781 23202903 -43465102 + MIR3 SINE MIR 49 176 -32 439 339 61 91 chr20 23203354 23203794 -43464211 - L2 LINE L2 -15 3257 2831 947 245 68 34 chr20 23204386 23204712 -43463293 - MER46C DNA MER2_type -1 337 1 200 317 0 0 chr20 23204747 23204807 -43463198 - L2 LINE L2 -217 3055 2996 5684 108 51 2 chr20 23204862 23206463 -43461542 - L1PA11 LINE L1 0 6174 4492 349 328 167 0 chr20 23207003 23207207 -43460798 + MIR SINE MIR 1 238 -24 2219 122 0 0 chr20 23207281 23207577 -43460428 - AluSx SINE Alu -16 296 1 1069 95 154 0 chr20 23210018 23210187 -43457818 + L1PB1 LINE L1 5957 6151 0 664 190 17 0 chr20 23210196 23210312 -43457693 + FLAM_C SINE Alu 1 118 -15 1440 89 0 0 chr20 23210349 23210528 -43457477 - AluSx SINE Alu -93 219 41 1196 105 70 0 chr20 23210527 23210698 -43457307 + AluSg/x SINE Alu 114 296 -16 * 672 152 0 2 chr20 23210924 23211188 -43456817 + AluSx SINE Alu 1 312 0 735 274 78 24 chr20 23211219 23211602 -43456403 + L1ME LINE L1 5309 5712 -409 331 204 0 73 chr20 23212069 23212206 -43455799 - LTR33 LTR ERVL -391 130 4 1460 251 166 10 chr20 23212669 23213170 -43454835 + MLT1G1 LTR MaLR 2 580 -15 2084 92 48 0 chr20 23213413 23213748 -43454257 + AluSx SINE Alu 1 348 0 348 285 100 18 chr20 23214247 23214292 -43453713 + L1MC5 LINE L1 7660 7700 -342 471 245 172 13 chr20 23214292 23214443 -43453562 - MER96 DNA MER1_type 0 175 1 348 285 100 18 chr20 23214443 23214699 -43453306 + L1MC5 LINE L1 7700 8002 -40 485 276 135 16 chr20 23215028 23215220 -43452785 + MIR SINE MIR 24 238 -24 409 170 53 0 chr20 23216584 23216678 -43451327 + MER5B DNA MER1_type 75 173 -5 463 274 51 40 chr20 23216702 23216877 -43451128 - MER5B DNA MER1_type -1 177 1 254 217 82 94 chr20 23218847 23219091 -43448914 - L1ME LINE L1 -342 5779 5539 288 0 0 0 chr20 23219273 23219305 -43448700 + (TG)n Simple_repeat Simple_repeat 1 32 0 653 292 210 6 chr20 23220541 23221049 -43446956 - L2 LINE L2 0 3313 2704 939 70 78 0 chr20 23221415 23221544 -43446461 - MER85 DNA T2_type 0 139 1 266 267 9 67 chr20 23221771 23221876 -43446129 + MLT1H LTR MaLR 255 353 -196 239 185 0 77 chr20 23221946 23222011 -43445994 + MLT1H LTR MaLR 488 547 -2 755 207 20 0 chr20 23222957 23223107 -43444898 + FRAM SINE Alu 1 153 -13 991 245 80 52 chr20 23223575 23224019 -43443986 + MLT1J LTR MaLR 1 457 -54 294 47 23 0 chr20 23224019 23224062 -43443943 - MLT2B1 LTR ERVL -1 463 420 1414 154 42 85 chr20 23224101 23224245 -43443760 + MER2 DNA MER2_type 1 150 -195 2092 118 38 0 chr20 23224245 23224532 -43443473 - AluSx SINE Alu -14 298 1 1414 154 42 85 chr20 23224532 23224718 -43443287 + MER2 DNA MER2_type 150 317 -28 381 43 0 0 chr20 23224760 23224807 -43443198 + (GA)n Simple_repeat Simple_repeat 2 48 0 2066 171 75 30 chr20 23224811 23225238 -43442767 - MLT2B1 LTR ERVL -74 446 1 274 196 0 0 chr20 23225242 23225298 -43442707 + MLT1J LTR MaLR 454 509 -2 248 274 0 17 chr20 23225732 23225849 -43442156 + CT-rich Low_complexity Low_complexity 2 116 0 962 193 17 124 chr20 23225853 23226200 -43441805 - L1ME3 LINE L1 -22 6140 5831 257 316 15 15 chr20 23226312 23226448 -43441557 + L1MEd LINE L1 1154 1289 -4916 471 254 15 8 chr20 23226593 23226727 -43441278 + L1ME2 LINE L1 6027 6161 -3 237 167 0 0 chr20 23226871 23226919 -43441086 + L1MEd LINE L1 1619 1666 -4730 2267 118 0 0 chr20 23226992 23227297 -43440708 + AluSg SINE Alu 1 305 -5 2608 55 0 3 chr20 23227425 23227737 -43440268 + AluY SINE Alu 1 311 0 2195 105 0 7 chr20 23227933 23228292 -43439713 + AluSx SINE Alu 1 357 0 1806 79 26 0 chr20 23228298 23228525 -43439480 - AluY SINE Alu -78 233 1 321 164 90 0 chr20 23229152 23229219 -43438786 - LTR54B LTR ERV1 -425 73 1 22385 46 3 2 chr20 23229417 23233021 -43434984 - L1PA5 LINE L1 0 6154 2546 337 256 56 8 chr20 23233117 23233242 -43434763 - MLT1I LTR MaLR -266 143 13 591 237 63 52 chr20 23233645 23234012 -43433993 + L1MEd LINE L1 562 932 -5187 602 132 0 0 chr20 23234015 23234106 -43433899 - 5S rRNA rRNA -30 91 1 4278 154 56 2 chr20 23234221 23235041 -43432964 + L1MB5 LINE L1 5290 6153 -21 428 256 168 44 chr20 23235206 23235389 -43432616 + L1MEd LINE L1 1063 1222 -5088 1962 125 33 20 chr20 23235389 23235694 -43432311 + AluSx SINE Alu 1 309 -3 428 256 168 44 chr20 23235694 23235942 -43432063 + L1MEd LINE L1 1222 1581 -4729 2361 89 0 10 chr20 23235961 23236265 -43431740 - AluY SINE Alu -10 301 1 445 255 28 0 chr20 23238194 23238300 -43429705 - LTR16C LTR ERVL 0 491 383 1273 211 73 38 chr20 23238529 23238870 -43429135 - MLT1A1 LTR MaLR -12 353 1 695 304 110 19 chr20 23238870 23239133 -43428872 - LTR16C LTR ERVL -120 371 85 339 242 40 30 chr20 23239537 23239636 -43428369 + MER5A DNA MER1_type 78 188 -1 1631 269 77 27 chr20 23239736 23239793 -43428212 + MLT1G LTR MaLR 1 54 -536 1263 201 31 90 chr20 23239793 23240181 -43427824 - MLT1A1 LTR MaLR 0 365 1 1631 269 77 27 chr20 23240181 23240685 -43427320 + MLT1G LTR MaLR 54 590 0 862 202 0 12 chr20 23241715 23241888 -43426117 + FAM SINE Alu 5 175 0 884 269 29 8 chr20 23242273 23242518 -43425487 + MIR SINE MIR 2 251 -11 2931 217 30 19 chr20 23243420 23244153 -43423852 + L1MC4a LINE L1 7068 7808 0 22 0 0 0 chr20 23244606 23244628 -43423377 + AT_rich Low_complexity Low_complexity 1 22 0 2133 110 40 3 chr20 23245616 23245916 -43422089 - AluSx SINE Alu -1 311 1 2479 103 0 0 chr20 23246426 23246738 -43421267 - AluSx SINE Alu 0 312 1 444 229 9 0 chr20 23248460 23248565 -43419440 + Charlie4 DNA MER1_type 1856 1961 0 298 238 100 56 chr20 23248961 23249121 -43418884 + MER3 DNA MER1_type 35 201 -8 * 1019 176 16 0 chr20 23248986 23249173 -43418832 - MER3 DNA MER1_type -19 190 1 204 215 44 158 chr20 23249365 23249523 -43418482 - MIR SINE MIR -41 221 82 239 258 11 75 chr20 23249737 23249830 -43418175 + MIR3 SINE MIR 121 207 -1 306 246 282 7 chr20 23249998 23250140 -43417865 + MER5A DNA MER1_type 9 189 0 1957 173 24 0 chr20 23251548 23251896 -43416109 - MLT1B LTR MaLR -28 400 8 367 228 134 46 chr20 23252514 23252747 -43415258 - LTR16C LTR ERVL 0 483 212 1769 196 3 0 chr20 23253278 23253589 -43414416 + AluJo SINE Alu 1 312 0 286 250 0 0 chr20 23254520 23254584 -43413421 + L1ME2 LINE L1 6018 6081 -83 342 0 0 0 chr20 23256093 23256131 -43411874 + (TG)n Simple_repeat Simple_repeat 2 39 0 403 259 25 6 chr20 23257628 23257786 -43410219 + GA-rich Low_complexity Low_complexity 2 162 0 24 0 0 0 chr20 23260360 23260384 -43407621 + GC_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr20 23260467 23260496 -43407509 + AT_rich Low_complexity Low_complexity 1 29 0 186 71 0 0 chr20 23260677 23260705 -43407300 + (CAAAAA)n Simple_repeat Simple_repeat 1 28 0 219 36 0 0 chr20 23261236 23261264 -43406741 + (TAA)n Simple_repeat Simple_repeat 3 30 0 243 226 0 0 chr20 23263169 23263222 -43404783 + G-rich Low_complexity Low_complexity 1 53 0 25 51 0 0 chr20 23263356 23263395 -43404610 + GC_rich Low_complexity Low_complexity 1 39 0 323 173 27 0 chr20 23263545 23263620 -43404385 + GA-rich Low_complexity Low_complexity 1 77 0 261 328 0 0 chr20 23265699 23265763 -43402242 + polypyrimidine Low_complexity Low_complexity 3 66 0 877 174 3 144 chr20 23275319 23275618 -43392387 + L1MB8 LINE L1 5922 6178 0 619 272 77 70 chr20 23275731 23276491 -43391514 - L1MC4 LINE L1 0 8042 7246 1484 179 34 83 chr20 23278110 23278519 -43389486 - MLT1B LTR MaLR -1 389 1 223 336 18 53 chr20 23280083 23280196 -43387809 + L3b LINE CR1 1224 1332 -251 1926 126 3 34 chr20 23280413 23280739 -43387266 + AluSx SINE Alu 1 317 0 254 276 105 29 chr20 23281412 23281517 -43386488 + MER91B DNA MER1_type 77 189 -1 570 254 131 26 chr20 23281534 23281884 -43386121 - L1ME4a LINE L1 -158 5963 5577 399 41 0 0 chr20 23282682 23282731 -43385274 + (TG)n Simple_repeat Simple_repeat 1 49 0 1026 215 116 55 chr20 23283420 23283764 -43384241 + MLT1A1 LTR MaLR 1 365 0 512 328 113 9 chr20 23285251 23285693 -43382312 - L1ME4a LINE L1 0 6121 5634 892 253 165 54 chr20 23285837 23286368 -43381637 + MLT1E1 LTR MaLR 3 651 -3 815 239 18 9 chr20 23286701 23286919 -43381086 - L1MC4 LINE L1 -969 7073 6854 537 110 0 0 chr20 23286962 23287044 -43380961 + (TCCCC)n Simple_repeat Simple_repeat 5 86 0 802 113 14 7 chr20 23287047 23287189 -43380816 + (TTTC)n Simple_repeat Simple_repeat 4 180 0 963 200 6 0 chr20 23287189 23287360 -43380645 - AluJo SINE Alu 0 436 123 657 247 72 75 chr20 23287350 23287668 -43380337 - L1MC4a LINE L1 -1285 6523 6207 * 2609 65 0 0 chr20 23287668 23287975 -43380030 - AluY SINE Alu -4 307 1 657 247 72 75 chr20 23287975 23288022 -43379983 - L1MC4a LINE L1 -1601 6207 6161 878 144 8 0 chr20 23288016 23288148 -43379857 - AluJo SINE Alu -169 133 1 793 223 33 73 chr20 23288568 23288842 -43379163 + L1MC4 LINE L1 7654 7916 -126 386 262 0 16 chr20 23288844 23289027 -43378978 + (CA)n Simple_repeat Simple_repeat 1 180 0 * 434 182 0 68 chr20 23288996 23289188 -43378817 + (CATA)n Simple_repeat Simple_repeat 2 180 0 317 281 0 7 chr20 23289212 23289365 -43378640 + (CATA)n Simple_repeat Simple_repeat 3 154 0 276 237 13 13 chr20 23289386 23289462 -43378543 + L1MC4 LINE L1 7967 8042 0 321 332 37 14 chr20 23289634 23289851 -43378154 + L1M4 LINE L1 3014 3235 -2911 1069 236 54 6 chr20 23290666 23291063 -43376942 - MLT1E-int LTR MaLR -836 535 1 1541 256 100 33 chr20 23291063 23291143 -43376862 - MLT1E LTR MaLR 0 593 520 201 39 0 0 chr20 23291153 23291179 -43376826 + (TATTG)n Simple_repeat Simple_repeat 3 28 0 1381 149 145 30 chr20 23291179 23291430 -43376575 - AluJo SINE Alu -27 285 1 1541 256 100 33 chr20 23291430 23291799 -43376206 - MLT1E LTR MaLR -73 520 114 1519 283 75 14 chr20 23292126 23292191 -43375814 - MLT1H1 LTR MaLR -2 553 493 2062 145 0 22 chr20 23292191 23292502 -43375503 - AluJo SINE Alu -8 304 1 1519 283 75 14 chr20 23292502 23292930 -43375075 - MLT1H1 LTR MaLR -62 493 30 379 209 157 0 chr20 23293129 23293263 -43374742 + MER5C DNA MER1_type 160 314 -10 267 229 14 14 chr20 23293314 23293384 -43374621 - Tigger5 DNA MER2_type -3 2320 2251 2319 141 58 19 chr20 23293773 23294185 -43373820 - MSTA LTR MaLR 0 428 1 341 267 127 68 chr20 23294185 23294421 -43373584 + L3 LINE CR1 809 1058 -519 220 301 85 26 chr20 23294575 23294728 -43373277 + L3 LINE CR1 1077 1238 -339 823 214 86 0 chr20 23294758 23294945 -43373060 - MER3 DNA MER1_type -6 203 1 278 325 106 0 chr20 23295027 23295150 -43372855 + L3 LINE CR1 1335 1470 -107 333 299 111 34 chr20 23295228 23295435 -43372570 - MIR SINE MIR -14 248 26 618 240 164 70 chr20 23295761 23296206 -43371799 - MLT1H LTR MaLR -1 548 62 2487 139 30 14 chr20 23296589 23297020 -43370985 + L1MB2 LINE L1 5732 6169 -2 216 0 0 0 chr20 23297051 23297075 -43370930 + (A)n Simple_repeat Simple_repeat 1 24 0 2457 82 0 0 chr20 23297207 23297511 -43370494 + AluSc SINE Alu 1 304 -5 2222 114 0 0 chr20 23298409 23298707 -43369298 - AluSx SINE Alu -14 298 1 363 221 88 18 chr20 23300163 23300276 -43367729 + MIR SINE MIR 96 216 -46 592 191 17 0 chr20 23300284 23300399 -43367606 + FLAM_A SINE Alu 23 139 -3 24 32 0 0 chr20 23300523 23300554 -43367451 + AT_rich Low_complexity Low_complexity 1 31 0 330 194 15 0 chr20 23300554 23300621 -43367384 - L2 LINE L2 -4 3268 3201 1786 166 10 13 chr20 23300677 23300990 -43367015 - AluJo SINE Alu 0 312 1 3085 43 8 0 chr20 23301024 23301397 -43366608 + L1PA8 LINE L1 5793 6168 -4 238 324 73 45 chr20 23301402 23301581 -43366424 - L1ME LINE L1 -481 5640 5457 2022 143 39 26 chr20 23302088 23302474 -43365531 - L1MB3 LINE L1 0 6183 5793 1623 145 112 15 chr20 23302892 23303161 -43364844 + AluJo SINE Alu 1 295 -17 1931 128 68 0 chr20 23303184 23303465 -43364540 - AluSx SINE Alu -12 300 1 588 84 0 0 chr20 23305219 23305302 -43362703 + (TTCC)n Simple_repeat Simple_repeat 2 84 0 35 0 0 0 chr20 23305476 23305511 -43362494 + AT_rich Low_complexity Low_complexity 1 35 0 198 0 0 0 chr20 23305607 23305629 -43362376 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 258 56 0 0 chr20 23305628 23305664 -43362341 + (CA)n Simple_repeat Simple_repeat 1 36 0 257 353 10 0 chr20 23305689 23305791 -43362214 - MER5A DNA MER1_type -5 184 82 1796 229 13 0 chr20 23305900 23306289 -43361716 - L1MD3 LINE L1 0 7995 7602 498 290 17 40 chr20 23306629 23306805 -43361200 - MIR3 SINE MIR -32 176 5 2227 245 121 14 chr20 23307467 23308241 -43359764 - L1ME2 LINE L1 -9 6155 5299 279 214 0 0 chr20 23308252 23308308 -43359697 - Charlie8 DNA MER1_type -2270 147 92 2225 112 0 7 chr20 23308326 23308630 -43359375 + AluSx SINE Alu 8 309 -3 1155 160 52 4 chr20 23308964 23309195 -43358810 + L1MB3 LINE L1 5942 6183 0 737 240 50 0 chr20 23310358 23310537 -43357468 - MER5A DNA MER1_type 0 189 2 2147 119 7 0 chr20 23310600 23310894 -43357111 + AluSx SINE Alu 1 296 -16 1393 282 123 15 chr20 23311317 23311838 -43356167 - MLT1K LTR MaLR -8 580 4 311 156 26 65 chr20 23311856 23311933 -43356072 + MER5A DNA MER1_type 1 74 -115 1991 161 3 0 chr20 23311935 23312245 -43355760 + AluJo SINE Alu 1 311 -1 315 240 86 74 chr20 23312289 23312464 -43355541 + MER5B DNA MER1_type 1 177 -1 2278 124 0 0 chr20 23312981 23313287 -43354718 - AluSx SINE Alu -6 306 1 2199 237 49 28 chr20 23314207 23314878 -43353127 - MER97b DNA MER1_type? -328 725 41 291 227 0 0 chr20 23314889 23314955 -43353050 + MIR SINE MIR 163 228 -34 1417 102 6 0 chr20 23315071 23315248 -43352757 + AluSx SINE Alu 1 178 -134 492 229 8 8 chr20 23315269 23315387 -43352618 - L1ME3A LINE L1 -342 5828 5711 2953 278 113 25 chr20 23315396 23317119 -43350886 - L1ME3A LINE L1 -746 5424 3543 334 341 82 19 chr20 23317339 23317547 -43350458 + MIR SINE MIR 26 246 -16 245 288 75 12 chr20 23317580 23317660 -43350345 - L2 LINE L2 0 3313 3229 25 0 0 0 chr20 23318273 23318298 -43349707 + AT_rich Low_complexity Low_complexity 1 25 0 286 262 0 29 chr20 23318490 23318593 -43349412 + (CATATA)n Simple_repeat Simple_repeat 3 102 0 1980 135 0 30 chr20 23318604 23318908 -43349097 - AluSx SINE Alu -17 295 1 462 296 15 0 chr20 23320155 23320290 -43347715 - MER5A DNA MER1_type -52 137 1 392 215 21 11 chr20 23320335 23320428 -43347577 + MER5B DNA MER1_type 2 95 -83 328 233 14 0 chr20 23320535 23320608 -43347397 + MER5B DNA MER1_type 105 178 0 987 261 81 22 chr20 23320686 23320830 -43347175 - MER20B DNA MER1_type -42 741 607 333 0 0 0 chr20 23320830 23320867 -43347138 + (CA)n Simple_repeat Simple_repeat 2 38 0 987 261 81 22 chr20 23320867 23321079 -43346926 - MER20B DNA MER1_type -176 607 364 272 272 35 18 chr20 23321900 23322069 -43345936 + (TA)n Simple_repeat Simple_repeat 2 173 0 30 45 0 0 chr20 23322069 23322113 -43345892 + AT_rich Low_complexity Low_complexity 1 44 0 1798 159 51 0 chr20 23322208 23322504 -43345501 - AluJo SINE Alu -1 311 1 738 295 142 18 chr20 23323262 23323719 -43344286 - L1MC4a LINE L1 -1861 5947 5434 1233 179 115 8 chr20 23324928 23325162 -43342843 - AluJo SINE Alu -53 259 1 747 0 0 0 chr20 23325709 23325792 -43342213 + (TTCC)n Simple_repeat Simple_repeat 4 86 0 203 263 12 75 chr20 23326221 23326301 -43341704 - MER91 DNA MER1_type -65 75 1 2707 248 32 17 chr20 23326851 23327483 -43340522 + MER82 DNA MER2_type 9 649 -4 338 237 13 118 chr20 23327870 23328022 -43339983 - Charlie8 DNA MER1_type -2244 173 38 185 355 0 48 chr20 23329109 23329233 -43338772 - MIR SINE MIR -26 236 119 427 298 181 41 chr20 23330086 23330766 -43337239 + L2 LINE L2 1656 2240 -1074 2213 125 57 40 chr20 23330766 23331191 -43336814 - MSTB1 LTR MaLR 0 432 1 427 298 181 41 chr20 23331191 23331670 -43336335 + L2 LINE L2 2240 2977 -337 233 290 122 30 chr20 23331810 23331941 -43336064 + L2 LINE L2 3171 3313 0 348 238 89 0 chr20 23334525 23334626 -43333379 + MLT1J LTR MaLR 69 178 -333 201 325 13 26 chr20 23334628 23334705 -43333300 - MIR SINE MIR -167 95 20 1042 224 32 16 chr20 23334944 23335190 -43332815 - L1ME1 LINE L1 -4 6162 5913 683 251 240 3 chr20 23335921 23336204 -43331801 - LTR16C LTR ERVL 0 491 142 1414 118 5 9 chr20 23337188 23337408 -43330597 - L1MA6 LINE L1 0 6300 6082 25 0 0 0 chr20 23337408 23337433 -43330572 + AT_rich Low_complexity Low_complexity 1 25 0 1147 196 38 0 chr20 23337559 23337768 -43330237 + MER20 DNA MER1_type 1 217 -2 1474 168 55 52 chr20 23337787 23338040 -43329965 - AluJb SINE Alu -20 292 36 2274 93 3 16 chr20 23338040 23338350 -43329655 + AluSq SINE Alu 1 306 -7 1474 168 55 52 chr20 23338350 23338387 -43329618 - AluJb SINE Alu -276 36 1 24 0 0 0 chr20 23338853 23338877 -43329128 + AT_rich Low_complexity Low_complexity 1 24 0 377 341 0 0 chr20 23339297 23339429 -43328576 + MIR SINE MIR 5 136 -126 1799 184 23 0 chr20 23340335 23340640 -43327365 - AluJo SINE Alu 0 312 1 25 31 0 0 chr20 23340680 23340712 -43327293 + AT_rich Low_complexity Low_complexity 1 32 0 754 229 60 20 chr20 23340897 23341098 -43326907 + MER3 DNA MER1_type 1 209 0 1825 174 0 7 chr20 23341250 23341544 -43326461 - AluJb SINE Alu -20 292 1 484 225 39 39 chr20 23341592 23341746 -43326259 - MIR SINE MIR -44 218 63 330 236 89 58 chr20 23341760 23341951 -43326054 - L1M4 LINE L1 -1299 4847 4651 453 256 280 0 chr20 23341952 23342120 -43325885 - MER20 DNA MER1_type -1 218 4 1025 314 41 22 chr20 23342123 23342662 -43325343 - L1M4 LINE L1 -1488 4658 4110 255 301 126 10 chr20 23342680 23342783 -43325222 - MIR SINE MIR -58 150 36 619 289 62 8 chr20 23343099 23343341 -43324664 - MIR SINE MIR -3 259 5 243 355 116 0 chr20 23343508 23343663 -43324342 - MIR SINE MIR -13 249 77 26 30 0 0 chr20 23344438 23344471 -43323534 + AT_rich Low_complexity Low_complexity 1 33 0 287 286 36 64 chr20 23344508 23344648 -43323357 - HAL1 LINE L1 -12 2495 2360 678 266 122 42 chr20 23344709 23345063 -43322942 - HAL1 LINE L1 -150 2357 1976 879 210 194 46 chr20 23345086 23345502 -43322503 - MER66A LTR ERV1 0 604 96 347 275 70 79 chr20 23345565 23345794 -43322211 - HAL1 LINE L1 -560 1947 1721 2976 276 83 42 chr20 23346065 23346641 -43321364 - HAL1 LINE L1 -795 1712 1161 1118 162 0 22 chr20 23346641 23346820 -43321185 - FAM SINE Alu 0 175 1 2976 276 83 42 chr20 23346820 23347858 -43320147 - HAL1 LINE L1 -1346 1161 2 755 148 0 70 chr20 23348056 23348316 -43319689 - FLAM_A SINE Alu -169 142 58 3141 137 26 26 chr20 23348316 23348812 -43319193 - LOR1a LTR ERV1 0 497 2 755 148 0 70 chr20 23348812 23348867 -43319138 - FLAM_A SINE Alu -253 58 1 343 285 33 98 chr20 23348868 23349142 -43318863 - MER112 DNA MER1_type -1 259 4 228 265 51 10 chr20 23349362 23349460 -43318545 + MLT1J LTR MaLR 410 511 0 334 261 33 72 chr20 23349589 23349742 -43318263 - MIR SINE MIR -55 207 61 328 337 89 37 chr20 23349793 23349976 -43318029 + MIR SINE MIR 4 205 -57 1720 259 109 45 chr20 23349976 23350271 -43317734 + MLT1G1 LTR MaLR 1 276 -319 2234 100 40 3 chr20 23350271 23350570 -43317435 + AluSg SINE Alu 1 310 0 1720 259 109 45 chr20 23350570 23350833 -43317172 + MLT1G1 LTR MaLR 276 595 0 328 337 89 37 chr20 23350833 23350895 -43317110 + MIR SINE MIR 205 262 0 257 310 77 10 chr20 23351844 23351970 -43316035 + L2 LINE L2 2791 2923 -349 693 251 177 79 chr20 23352005 23352423 -43315582 + LTR16C LTR ERVL 1 459 -32 238 196 0 0 chr20 23352597 23352643 -43315362 - L2 LINE L2 0 3313 3268 272 281 31 10 chr20 23353107 23353203 -43314802 + LTR16C LTR ERVL 11 108 -383 678 253 31 0 chr20 23353230 23353392 -43314613 + LTR16C LTR ERVL 323 489 -2 1123 100 0 18 chr20 23353469 23353480 -43314525 - L1P LINE L1 -2657 3489 3479 5079 59 7 0 chr20 23353480 23354092 -43313913 - L1PA8 LINE L1 -2 6170 5555 1123 100 0 18 chr20 23354092 23354250 -43313755 - L1P LINE L1 -2667 3479 3323 1490 177 115 10 chr20 23354681 23354986 -43313019 + MER44D DNA MER2_type 2 608 -1 1177 297 68 69 chr20 23355047 23356165 -43311840 - HAL1 LINE L1 -575 1932 816 202 220 70 5 chr20 23358003 23358088 -43309917 + MIR SINE MIR 17 113 -95 289 250 0 24 chr20 23358233 23358397 -43309608 + (CATA)n Simple_repeat Simple_repeat 4 163 0 281 272 0 44 chr20 23358409 23358523 -43309482 + (CA)n Simple_repeat Simple_repeat 1 109 0 186 208 0 0 chr20 23358543 23358591 -43309414 + (CA)n Simple_repeat Simple_repeat 1 48 0 943 229 123 108 chr20 23359346 23359931 -43308074 + MLT1G1 LTR MaLR 2 595 0 904 191 17 0 chr20 23360542 23360720 -43307285 + AluJo SINE Alu 122 302 -10 590 233 103 27 chr20 23360720 23360943 -43307062 - MER5C DNA MER1_type -82 242 3 3514 40 0 0 chr20 23361156 23361552 -43306453 + L1PA4 LINE L1 5760 6155 0 333 0 0 0 chr20 23361574 23361611 -43306394 + (CA)n Simple_repeat Simple_repeat 2 38 0 371 21 21 0 chr20 23361842 23361890 -43306115 + (TG)n Simple_repeat Simple_repeat 1 49 0 359 328 17 47 chr20 23362452 23362684 -43305321 + L1MC4a LINE L1 5618 5842 -1966 458 297 99 39 chr20 23363213 23363445 -43304560 + MIR SINE MIR 17 262 0 251 277 149 14 chr20 23363572 23363720 -43304285 - MIR3 SINE MIR -29 179 12 1579 172 50 7 chr20 23363773 23364052 -43303953 + AluJb SINE Alu 1 291 -21 308 286 50 64 chr20 23365653 23365936 -43302069 - L1ME4a LINE L1 -7 6114 5836 225 333 136 14 chr20 23365985 23366132 -43301873 - MIR SINE MIR -10 252 88 547 291 53 53 chr20 23366178 23366463 -43301542 - L1ME4a LINE L1 -2030 5778 5494 536 278 90 45 chr20 23366518 23366806 -43301199 - L1MC4 LINE L1 -20 8022 7722 2191 155 14 0 chr20 23366821 23367176 -43300829 - MER47A DNA MER2_type -6 360 1 2488 246 107 11 chr20 23367196 23367982 -43300023 - L1MC4 LINE L1 -366 7676 6816 24 0 0 0 chr20 23367992 23368016 -43299989 + AT_rich Low_complexity Low_complexity 1 24 0 2742 235 31 43 chr20 23368037 23368143 -43299862 - L1ME1 LINE L1 -15 6151 6045 441 130 0 0 chr20 23368143 23368212 -43299793 + L1MA9 LINE L1 6239 6307 -5 2742 235 31 43 chr20 23368212 23368823 -43299182 - L1ME1 LINE L1 -121 6045 5443 7484 112 6 44 chr20 23369279 23369909 -43298096 + L1MA3 LINE L1 4558 5210 -1095 2105 133 0 3 chr20 23369909 23370203 -43297802 + AluSx SINE Alu 1 293 -19 7484 112 6 44 chr20 23370203 23371389 -43296616 + L1MA3 LINE L1 5210 6300 -5 897 202 165 53 chr20 23372303 23372925 -43295080 - LTR50 LTR ERVL -16 779 3 302 121 0 17 chr20 23373069 23373127 -43294878 + (TTCC)n Simple_repeat Simple_repeat 3 59 0 619 144 22 44 chr20 23373144 23373325 -43294680 + CT-rich Low_complexity Low_complexity 4 180 0 222 286 57 67 chr20 23373561 23373666 -43294339 + MIR SINE MIR 89 192 -70 1651 196 10 6 chr20 23373672 23373983 -43294022 + AluJo SINE Alu 1 312 0 1854 278 118 12 chr20 23374024 23374787 -43293218 + HAL1 LINE L1 11 854 -1653 1765 230 148 5 chr20 23374792 23375231 -43292774 - MLT1D LTR MaLR -3 502 1 474 149 47 47 chr20 23375290 23375397 -43292608 + MER105 DNA DNA 95 201 -3 1309 236 67 36 chr20 23375429 23375495 -43292510 + HAL1 LINE L1 926 989 -1518 2266 131 0 61 chr20 23375495 23375854 -43292151 - MER1B DNA MER1_type 0 337 1 1309 236 67 36 chr20 23375854 23376283 -43291722 + HAL1 LINE L1 989 1436 -1071 300 222 25 8 chr20 23376295 23376539 -43291466 + (TATATG)n Simple_repeat Simple_repeat 1 248 0 829 243 187 88 chr20 23376547 23377252 -43290753 + HAL1 LINE L1 1472 2246 -261 190 244 67 0 chr20 23377445 23377490 -43290515 + MIR SINE MIR 89 136 -72 3490 128 8 14 chr20 23377728 23378228 -43289777 + LOR1a LTR ERV1 1 497 0 247 359 57 9 chr20 23378881 23378987 -43289018 + MIR SINE MIR 37 147 -61 594 278 140 50 chr20 23379315 23379806 -43288199 - L2 LINE L2 -47 3266 2727 22 52 0 35 chr20 23380315 23380343 -43287662 + AT_rich Low_complexity Low_complexity 1 28 -28 1775 156 6 61 chr20 23380343 23380671 -43287334 + AluJo SINE Alu 1 310 -2 22 52 0 35 chr20 23380671 23380700 -43287305 + AT_rich Low_complexity Low_complexity 28 56 0 1266 189 88 135 chr20 23380992 23381584 -43286421 - L1MC4 LINE L1 0 8042 7479 261 256 157 22 chr20 23382549 23382699 -43285306 + MIR SINE MIR 12 184 -62 1738 220 65 39 chr20 23382755 23383246 -43284759 + Charlie4a DNA MER1_type 5 508 0 2130 108 3 30 chr20 23383612 23383917 -43284088 + AluSx SINE Alu 2 298 -14 327 325 101 18 chr20 23384196 23384365 -43283640 + MIR SINE MIR 77 259 -3 9378 72 11 23 chr20 23384460 23386514 -43281491 + L1PA6 LINE L1 4128 6154 0 302 392 36 14 chr20 23386521 23386743 -43281262 + MLT1K LTR MaLR 93 319 -269 492 242 170 7 chr20 23386785 23386938 -43281067 + MLT1K LTR MaLR 397 574 -14 2559 183 13 18 chr20 23387389 23387898 -43280107 - L1MA3 LINE L1 0 6305 5808 633 290 88 37 chr20 23388757 23389218 -43278787 + MLT1H LTR MaLR 21 544 -5 815 30 0 0 chr20 23389234 23389333 -43278672 + AluYa5/8 SINE Alu 212 310 0 335 240 182 47 chr20 23391335 23391527 -43276478 + MER112 DNA MER1_type 1 218 -42 543 294 76 17 chr20 23391987 23392225 -43275780 + MIR SINE MIR 4 255 -7 234 0 0 0 chr20 23392969 23392995 -43275010 + (TG)n Simple_repeat Simple_repeat 2 27 0 254 368 75 26 chr20 23393541 23393807 -43274198 + L2 LINE L2 2563 2841 -473 7730 206 23 100 chr20 23393979 23394473 -43273532 + L1M4 LINE L1 2516 3046 -3100 1943 145 0 21 chr20 23394473 23394790 -43273215 + AluSx SINE Alu 1 311 0 7730 206 23 100 chr20 23394790 23395712 -43272293 + L1M4 LINE L1 3046 4037 -2109 480 120 40 10 chr20 23395712 23395812 -43272193 + Charlie5 DNA MER1_type 2389 2491 -121 2326 12 0 0 chr20 23395818 23396071 -43271934 + AluYa5 SINE Alu 45 297 -14 7730 206 23 100 chr20 23396071 23396687 -43271318 + L1M4 LINE L1 4042 4411 -1735 2210 123 3 0 chr20 23396687 23396996 -43271009 + AluSx SINE Alu 1 310 -2 7730 206 23 100 chr20 23396996 23397532 -43270473 + L1M4 LINE L1 4411 4987 -1159 773 234 5 5 chr20 23397538 23397730 -43270275 + L1MB4 LINE L1 6 197 -6666 * 9257 192 42 23 chr20 23397727 23400662 -43267343 + L1MB4 LINE L1 1392 4377 -2485 3557 133 72 0 chr20 23400662 23401179 -43266826 + MER41C LTR ERV1 1 554 0 7050 74 26 0 chr20 23401266 23402170 -43265835 + MER41C-int LTR ERV1 3 930 -6826 * 12476 83 28 2 chr20 23402162 23403812 -43264193 + MER41C-int LTR ERV1 1363 3055 -4701 15790 67 14 1 chr20 23403812 23405784 -43262221 + MER41C-int LTR ERV1 4399 6395 -1361 3857 84 39 13 chr20 23405780 23406315 -43261690 + MER41C-int LTR ERV1 7208 7756 0 * 3597 131 65 0 chr20 23406315 23406835 -43261170 + MER41C LTR ERV1 1 554 0 8302 184 25 20 chr20 23407004 23408813 -43259192 + L1MB4 LINE L1 4372 6202 -694 288 0 0 0 chr20 23408813 23408845 -43259160 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 8302 184 25 20 chr20 23408845 23409544 -43258461 + L1MB4 LINE L1 6202 6896 0 22 0 0 0 chr20 23409903 23409925 -43258080 + AT_rich Low_complexity Low_complexity 1 22 0 27 29 0 0 chr20 23409943 23409977 -43258028 + AT_rich Low_complexity Low_complexity 1 34 0 255 293 108 36 chr20 23409998 23410220 -43257785 + L1ME LINE L1 5527 5764 -357 202 245 0 0 chr20 23410719 23410768 -43257237 - L2 LINE L2 -4 3309 3261 251 241 127 0 chr20 23410844 23410923 -43257082 - MIR SINE MIR -87 175 87 194 260 0 96 chr20 23411514 23411587 -43256418 + MIR3 SINE MIR 119 184 -24 28 86 0 0 chr20 23411806 23411876 -43256129 + AT_rich Low_complexity Low_complexity 1 70 0 2668 283 133 37 chr20 23411930 23413413 -43254592 - L2 LINE L2 -251 3062 1429 1783 153 39 11 chr20 23413413 23413694 -43254311 - AluJo SINE Alu -23 289 1 2668 283 133 37 chr20 23413694 23413786 -43254219 - L2 LINE L2 -1884 1429 1347 1922 168 73 68 chr20 23413786 23414304 -43253701 - Charlie1b DNA MER1_type -2 521 1 209 271 0 21 chr20 23414330 23414378 -43253627 - MIR SINE MIR -135 73 27 2158 104 16 13 chr20 23415784 23416092 -43251913 + AluSx SINE Alu 1 309 -3 578 321 113 0 chr20 23416353 23416565 -43251440 - MIR SINE MIR -16 246 11 339 290 80 35 chr20 23416598 23416932 -43251073 - L1ME LINE L1 -297 5824 5417 2471 90 0 0 chr20 23417326 23417637 -43250368 + AluY SINE Alu 1 311 0 768 284 107 12 chr20 23418210 23418611 -43249394 - LTR16A LTR ERVL -11 439 1 364 305 96 40 chr20 23418885 23419062 -43248943 - MER45C DNA AcHobo -441 512 326 680 259 81 25 chr20 23419134 23419370 -43248635 - MER45C DNA AcHobo -651 302 54 2480 68 0 0 chr20 23419934 23420243 -43247762 + AluY SINE Alu 1 309 -2 431 234 0 4 chr20 23420489 23420723 -43247282 + (CA)n Simple_repeat Simple_repeat 1 232 0 1445 196 21 11 chr20 23420814 23421099 -43246906 - AluJb SINE Alu -18 294 7 1410 178 30 0 chr20 23422044 23422280 -43245725 - AluJb SINE Alu -12 300 58 239 336 39 16 chr20 23422288 23422416 -43245589 + MIR SINE MIR 65 195 -67 2427 229 48 12 chr20 23423189 23423751 -43244254 - MLT1G LTR MaLR -1 589 8 2082 133 0 3 chr20 23424351 23424651 -43243354 + AluSg SINE Alu 1 299 -11 1562 238 90 0 chr20 23424729 23425141 -43242864 + MLT1G LTR MaLR 125 573 -17 324 48 0 0 chr20 23425496 23425538 -43242467 + (CA)n Simple_repeat Simple_repeat 1 42 0 860 191 27 33 chr20 23426810 23426993 -43241012 - MIR SINE MIR -60 202 21 773 177 8 8 chr20 23427252 23427382 -43240623 + FLAM_C SINE Alu 2 131 -2 499 184 60 1 chr20 23427439 23427566 -43240439 + L1ME1 LINE L1 6027 6162 -2 255 233 78 60 chr20 23428361 23428477 -43239528 - L1MC4 LINE L1 -1 8041 7924 1990 197 8 27 chr20 23428545 23428915 -43239090 - MLT1A1 LTR MaLR -1 364 2 764 245 10 25 chr20 23429004 23429208 -43238797 - L1ME2 LINE L1 -20 6144 5944 321 229 16 0 chr20 23429272 23429333 -43238672 + Tigger3(Golem) DNA MER2_type 1 62 -2967 775 81 0 0 chr20 23429508 23429607 -43238398 + AluY SINE Alu 211 309 -2 242 178 14 0 chr20 23429717 23429732 -43238273 + A-rich Low_complexity Low_complexity 1 14 -60 2216 128 0 3 chr20 23429732 23430045 -43237960 + AluSx SINE Alu 1 312 0 242 178 14 0 chr20 23430045 23430102 -43237903 + A-rich Low_complexity Low_complexity 14 74 0 271 293 41 61 chr20 23430293 23430440 -43237565 - MIR SINE MIR -67 195 52 340 273 83 25 chr20 23433753 23433874 -43234131 - MIR SINE MIR -62 146 19 648 297 51 25 chr20 23434485 23434721 -43233284 + MIR SINE MIR 6 247 -15 21 36 0 0 chr20 23435214 23435242 -43232763 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr20 23436071 23436093 -43231912 + AT_rich Low_complexity Low_complexity 1 22 0 1865 111 93 0 chr20 23436368 23436638 -43231367 - AluSx SINE Alu -17 295 1 1124 242 37 58 chr20 23437234 23437718 -43230287 - L1MC5 LINE L1 -178 7783 7310 821 180 0 55 chr20 23437812 23437995 -43230010 + FRAM SINE Alu 2 174 -2 660 281 138 30 chr20 23438694 23439357 -43228648 + L1MC4a LINE L1 4957 5681 -748 468 278 68 17 chr20 23439378 23439612 -43228393 + L1MC4a LINE L1 5763 6008 -1800 238 257 46 64 chr20 23439617 23439726 -43228279 + L1MC4a LINE L1 6069 6175 -1633 1949 121 24 0 chr20 23439734 23440024 -43227981 + AluSx SINE Alu 1 297 -15 183 276 92 13 chr20 23440499 23440575 -43227430 - L2 LINE L2 0 3272 3191 570 311 36 0 chr20 23442303 23442499 -43225506 - MIR SINE MIR -1 261 59 594 265 185 12 chr20 23443942 23444267 -43223738 - LTR16A LTR ERVL -47 403 23 2171 100 3 0 chr20 23445226 23445526 -43222479 + AluSp SINE Alu 1 301 -12 1645 168 38 0 chr20 23445563 23445854 -43222151 + AluJb SINE Alu 1 302 -10 297 0 0 0 chr20 23446191 23446224 -43221781 + (CA)n Simple_repeat Simple_repeat 2 34 0 844 229 0 6 chr20 23448403 23448578 -43219427 + MER5B DNA MER1_type 5 178 0 306 73 0 0 chr20 23448934 23448975 -43219030 + (TATG)n Simple_repeat Simple_repeat 2 42 0 396 0 0 0 chr20 23454870 23454914 -43213091 + (TG)n Simple_repeat Simple_repeat 2 45 0 24 0 0 0 chr20 23461003 23461027 -43206978 + AT_rich Low_complexity Low_complexity 1 24 0 23 97 0 0 chr20 23461638 23461710 -43206295 + AT_rich Low_complexity Low_complexity 1 72 0 261 0 0 0 chr20 23462810 23462839 -43205166 + (TG)n Simple_repeat Simple_repeat 2 30 0 217 233 12 12 chr20 23464331 23464417 -43203588 + CT-rich Low_complexity Low_complexity 1 86 0 183 42 0 0 chr20 23465207 23465231 -43202774 + (CAA)n Simple_repeat Simple_repeat 2 25 0 22 0 0 0 chr20 23465934 23465956 -43202049 + AT_rich Low_complexity Low_complexity 1 22 0 243 61 0 0 chr20 23468418 23468451 -43199554 + (T)n Simple_repeat Simple_repeat 1 33 0 183 156 0 0 chr20 23469359 23469391 -43198614 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1782 146 3 47 chr20 23469580 23469902 -43198103 + AluJo SINE Alu 1 308 -4 574 273 60 28 chr20 23470337 23470553 -43197452 + MIR SINE MIR 40 262 0 299 96 84 0 chr20 23470635 23470718 -43197287 + (TA)n Simple_repeat Simple_repeat 1 90 0 423 211 11 42 chr20 23470718 23470813 -43197192 + L1MC4 LINE L1 6612 6703 -1339 324 189 56 33 chr20 23470820 23470910 -43197095 + L1MC4 LINE L1 6612 6703 -1339 539 117 81 0 chr20 23470911 23471133 -43196872 + (TA)n Simple_repeat Simple_repeat 1 239 0 1744 151 0 43 chr20 23471148 23471452 -43196553 - AluJo SINE Alu -21 291 1 603 300 109 22 chr20 23473695 23473925 -43194080 - MIR SINE MIR 0 262 13 1558 247 58 41 chr20 23474117 23474655 -43193350 - MLT1H LTR MaLR 0 549 3 25 0 0 0 chr20 23475055 23475080 -43192925 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr20 23475383 23475405 -43192600 + AT_rich Low_complexity Low_complexity 1 22 0 2514 128 18 54 chr20 23475637 23476081 -43191924 - MSTC LTR MaLR 0 428 1 390 324 36 7 chr20 23476140 23476279 -43191726 + MIR SINE MIR 2 144 -118 751 171 171 0 chr20 23476685 23476837 -43191168 + MER45A DNA AcHobo 1 178 0 375 279 93 39 chr20 23477145 23477349 -43190656 + L1M4 LINE L1 5087 5301 -845 2351 63 0 7 chr20 23477476 23477777 -43190228 - AluY SINE Alu -12 299 1 872 184 101 75 chr20 23477965 23478243 -43189762 + LTR12 LTR ERV1 1 285 -429 292 200 0 40 chr20 23478244 23478319 -43189686 + LTR30 LTR ERV1 553 624 -98 663 157 0 7 chr20 23478319 23478441 -43189564 + LTR12 LTR ERV1 52 582 -132 337 259 222 26 chr20 23478442 23478712 -43189293 - LTR16A LTR ERVL -66 384 62 1077 224 36 0 chr20 23479879 23480102 -43187903 + L1PA16 LINE L1 5912 6142 -24 1265 216 77 26 chr20 23480657 23481008 -43186997 + MLT1C LTR MaLR 9 377 -90 262 330 52 35 chr20 23481137 23481252 -43186753 + L2 LINE L2 3195 3311 -2 240 86 0 0 chr20 23481779 23481814 -43186191 + (CA)n Simple_repeat Simple_repeat 1 35 0 1626 224 44 52 chr20 23481864 23482442 -43185563 - L1MC4 LINE L1 0 7854 7307 1819 176 19 80 chr20 23482442 23482619 -43185386 + MLT1B LTR MaLR 1 187 -203 2030 150 7 3 chr20 23482619 23482925 -43185080 + AluSx SINE Alu 2 308 -4 1819 176 19 80 chr20 23482925 23483162 -43184843 + MLT1B LTR MaLR 187 390 0 1626 224 44 52 chr20 23483162 23483342 -43184663 - L1MC4 LINE L1 -547 7307 7127 14272 167 56 9 chr20 23483387 23489319 -43178686 - L1PB1 LINE L1 -2 6865 637 934 175 31 0 chr20 23489322 23489516 -43178489 - L1PB1 LINE L1 -6663 200 1 247 178 0 0 chr20 23489522 23489567 -43178438 - L1MC4a LINE L1 -673 7135 7091 1255 247 118 41 chr20 23489581 23490341 -43177664 - L1ME3A LINE L1 -5 6559 5741 1846 143 7 24 chr20 23490405 23490692 -43177313 - AluJb SINE Alu -30 282 1 287 250 16 24 chr20 23490749 23490873 -43177132 - L1ME3A LINE L1 -4276 2445 2323 540 276 42 39 chr20 23490982 23491268 -43176737 - L1ME3A LINE L1 -4483 2238 1952 551 254 72 75 chr20 23492626 23492762 -43175243 - L1ME3A LINE L1 -4619 1921 1786 1920 132 102 9 chr20 23492762 23493095 -43174910 - THE1B LTR MaLR 0 364 1 551 254 72 75 chr20 23493095 23493414 -43174591 - L1ME3A LINE L1 -4754 1786 1467 2549 63 0 3 chr20 23493470 23493773 -43174232 + AluY SINE Alu 3 304 -7 495 244 95 18 chr20 23493799 23494020 -43173985 - L1M4c LINE L1 -1410 4805 4568 3373 121 21 68 chr20 23494020 23494308 -43173697 - Tigger3b DNA MER2_type -1798 1230 930 2136 136 62 45 chr20 23494308 23494727 -43173278 - MSTB LTR MaLR 0 426 1 3373 121 21 68 chr20 23494727 23495117 -43172888 - Tigger3b DNA MER2_type -2098 930 584 32306 73 7 8 chr20 23495119 23500519 -43167486 - L1PA6 LINE L1 -14 6140 753 2280 148 78 24 chr20 23500520 23500980 -43167025 - Tigger3b DNA MER2_type -745 486 2 961 286 96 24 chr20 23500981 23501817 -43166188 - L1M4 LINE L1 -1645 4501 3606 577 165 0 29 chr20 23501822 23501925 -43166080 - Tigger3(Golem) DNA MER2_type -2929 100 1 317 228 51 0 chr20 23501925 23502004 -43166001 - L1M4c LINE L1 -1645 4570 4488 432 96 70 185 chr20 23502008 23502165 -43165840 + Tigger3b DNA MER2_type 238 376 -855 814 276 61 40 chr20 23502297 23502923 -43165082 - L1M4c LINE L1 -2938 3277 2639 408 281 88 30 chr20 23502902 23503525 -43164480 - L1M4c LINE L1 -4953 1443 790 * 1839 141 0 28 chr20 23504125 23504415 -43163590 + AluJb SINE Alu 1 282 -30 291 330 94 0 chr20 23504447 23504553 -43163452 - MIR SINE MIR -63 145 30 195 42 0 0 chr20 23505070 23505094 -43162911 + (A)n Simple_repeat Simple_repeat 1 24 0 2395 126 27 52 chr20 23505932 23506377 -43161628 - Tigger2a DNA MER2_type 0 434 1 1043 243 10 21 chr20 23508328 23508616 -43159389 + MLT1F LTR MaLR 8 292 -250 342 271 31 0 chr20 23508618 23508714 -43159291 + MIR SINE MIR 113 211 -51 362 324 22 11 chr20 23508720 23508905 -43159100 - L1ME4a LINE L1 -285 5836 5650 1219 226 58 39 chr20 23510002 23510365 -43157640 - L1ME3 LINE L1 -21 6141 5772 1924 117 9 77 chr20 23510365 23510691 -43157314 + AluSc SINE Alu 1 304 -5 1185 211 5 0 chr20 23512206 23512429 -43155576 + MER58A DNA MER1_type 1 224 0 229 378 58 16 chr20 23512621 23512809 -43155196 - L2 LINE L2 -222 3050 2855 2456 210 30 16 chr20 23512908 23513465 -43154540 + MLT1F1 LTR MaLR 1 565 -2 260 307 89 0 chr20 23513820 23513921 -43154084 - MIR SINE MIR -118 144 35 197 65 32 0 chr20 23514279 23514310 -43153695 + (CA)n Simple_repeat Simple_repeat 2 33 0 2316 100 0 3 chr20 23514435 23514766 -43153239 - L1PB1 LINE L1 0 6151 5822 511 198 73 0 chr20 23515867 23515963 -43152042 + MER5A DNA MER1_type 10 112 -77 923 206 6 12 chr20 23516086 23516256 -43151749 - FRAM SINE Alu -8 168 1 519 183 26 52 chr20 23516341 23516494 -43151511 - MER113 DNA MER1_type? -320 201 53 340 320 164 27 chr20 23516696 23516921 -43151084 + MIR SINE MIR 1 256 -6 337 182 0 0 chr20 23518323 23518389 -43149616 + L1ME3A LINE L1 6047 6112 -58 1507 167 20 39 chr20 23518780 23519086 -43148919 - AluJo SINE Alu -12 300 1 35 0 0 0 chr20 23519096 23519131 -43148874 + AT_rich Low_complexity Low_complexity 1 35 0 6345 87 14 7 chr20 23519131 23520162 -43147843 - L1PA11 LINE L1 0 6174 5116 791 339 175 2 chr20 23520612 23521235 -43146770 + L2 LINE L2 1713 2443 -871 214 254 15 30 chr20 23521245 23521312 -43146693 + MIR SINE MIR 104 169 -93 * 274 225 12 75 chr20 23521311 23521391 -43146614 + MIR SINE MIR 117 191 -71 29 0 0 0 chr20 23521463 23521492 -43146513 + AT_rich Low_complexity Low_complexity 1 29 0 1909 186 0 0 chr20 23521643 23521955 -43146050 - AluJb SINE Alu 0 312 1 449 258 46 57 chr20 23522714 23522924 -43145081 - MLT1J LTR MaLR -302 209 3 4796 144 16 45 chr20 23523201 23523899 -43144106 - L1PB4 LINE L1 -10 6146 5429 2330 108 0 3 chr20 23523899 23524206 -43143799 - AluSq SINE Alu -7 306 1 4796 144 16 45 chr20 23524206 23525049 -43142956 - L1PB4 LINE L1 -727 5429 4645 21 36 0 0 chr20 23525092 23525120 -43142885 + AT_rich Low_complexity Low_complexity 1 28 0 277 215 2 13 chr20 23525897 23525975 -43142030 + MLT2F LTR ERVL 1 79 -549 441 285 108 31 chr20 23526049 23526439 -43141566 + MLT2F LTR ERVL 239 658 -5 188 140 380 0 chr20 23526557 23526607 -43141398 - MIR SINE MIR -72 190 122 967 255 55 36 chr20 23527765 23528149 -43139856 + LTR16C LTR ERVL 99 489 -2 537 164 17 17 chr20 23529238 23529354 -43138651 - MER103 DNA DNA -48 118 3 280 264 285 14 chr20 23529876 23530020 -43137985 + MIR SINE MIR 20 202 -60 473 281 16 18 chr20 23530122 23530329 -43137676 - MIR SINE MIR -1 261 1 207 100 0 0 chr20 23530772 23530802 -43137203 + (CAAG)n Simple_repeat Simple_repeat 2 31 0 214 320 33 60 chr20 23531403 23531553 -43136452 + L2 LINE L2 2946 3091 -181 738 271 112 20 chr20 23531862 23532052 -43135953 + MLT1J2 LTR MaLR 59 279 -171 2568 211 71 4 chr20 23532052 23532560 -43135445 + MLT1F LTR MaLR 1 542 0 738 271 112 20 chr20 23532560 23532620 -43135385 + MLT1J2 LTR MaLR 279 332 -118 305 204 19 0 chr20 23532641 23532695 -43135310 - MER69 DNA AcHobo -2471 55 1 708 311 98 30 chr20 23532705 23533648 -43134357 - L1MEc LINE L1 -1630 4585 3579 476 314 58 0 chr20 23533784 23534109 -43133896 - L1MEc LINE L1 -2845 3370 3027 962 296 36 24 chr20 23534314 23534850 -43133155 - L1MEc LINE L1 -3553 2662 2166 2181 70 0 7 chr20 23534890 23535161 -43132844 - AluY SINE Alu -8 303 35 207 146 0 0 chr20 23535611 23535652 -43132353 + (TG)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr20 23536358 23536387 -43131618 + AT_rich Low_complexity Low_complexity 1 29 0 261 0 0 0 chr20 23536791 23536820 -43131185 + (TA)n Simple_repeat Simple_repeat 2 30 0 3090 116 53 6 chr20 23536820 23537308 -43130697 - L1PB3 LINE L1 -7 6147 5637 2407 85 0 13 chr20 23537895 23538212 -43129793 - AluSq SINE Alu 0 313 1 313 218 57 21 chr20 23539313 23539531 -43128474 - L1MC5 LINE L1 -46 7915 7638 560 319 65 13 chr20 23539812 23540041 -43127964 + MIR SINE MIR 12 252 -10 479 259 38 15 chr20 23541286 23541417 -43126588 - MLT1H LTR MaLR -319 230 97 224 212 197 0 chr20 23542251 23542317 -43125688 - L2 LINE L2 -48 3265 3187 438 266 76 43 chr20 23542384 23542568 -43125437 - MIR SINE MIR -53 209 20 203 56 56 0 chr20 23542750 23542786 -43125219 + A-rich Low_complexity Low_complexity 3 40 0 966 216 62 0 chr20 23543756 23543964 -43124041 + MIR SINE MIR 2 222 -40 900 175 42 21 chr20 23544490 23544703 -43123302 + AluJb SINE Alu 107 312 0 1034 209 164 0 chr20 23544923 23545191 -43122814 - LTR16C LTR ERVL 0 491 180 422 276 113 64 chr20 23545945 23546047 -43121958 - L2 LINE L2 0 3313 3217 2143 129 47 19 chr20 23546047 23546412 -43121593 + THE1C LTR MaLR 1 375 0 422 276 113 64 chr20 23546412 23546836 -43121169 - L2 LINE L2 -96 3217 2741 1298 232 63 36 chr20 23546998 23547360 -43120645 + MLT1A2 LTR MaLR 3 374 0 203 308 0 0 chr20 23547751 23547803 -43120202 + MIR3 SINE MIR 143 194 -14 887 143 0 11 chr20 23547925 23548107 -43119898 + (TG)n Simple_repeat Simple_repeat 1 180 0 183 346 0 0 chr20 23548686 23548738 -43119267 + MIR3 SINE MIR 143 194 -14 1414 188 7 52 chr20 23549581 23549890 -43118115 + LTR1 LTR ERV1 1 295 -490 350 253 47 26 chr20 23551316 23551437 -43116568 + L1ME LINE L1 5533 5635 -486 999 61 0 0 chr20 23551444 23551575 -43116430 - L1P LINE L1 -926 5220 5090 3802 53 0 5 chr20 23551575 23552015 -43115990 + L1PA8 LINE L1 5720 6166 -6 348 324 38 43 chr20 23552787 23552972 -43115033 + MLT1I LTR MaLR 102 285 -124 300 137 0 0 chr20 23553435 23553486 -43114519 + (TG)n Simple_repeat Simple_repeat 2 52 0 230 244 12 0 chr20 23553543 23553625 -43114380 + (TG)n Simple_repeat Simple_repeat 2 84 0 2098 143 3 0 chr20 23553936 23554237 -43113768 - AluJb SINE Alu -10 302 1 303 345 8 0 chr20 23554879 23554998 -43113007 - L1ME LINE L1 -452 5718 5599 1768 184 106 16 chr20 23555874 23555923 -43112082 - MLT2D LTR ERVL -2 412 369 417 39 0 0 chr20 23555923 23555974 -43112031 + (GA)n Simple_repeat Simple_repeat 2 52 0 1768 184 106 16 chr20 23555974 23556300 -43111705 - MLT2D LTR ERVL -45 369 3 272 281 0 0 chr20 23557759 23557823 -43110182 + L2 LINE L2 3247 3310 -3 262 233 30 60 chr20 23558727 23558860 -43109145 - LTR16C LTR ERVL -11 480 352 1386 224 58 3 chr20 23559048 23559392 -43108613 - MLT1A1 LTR MaLR -1 364 2 982 256 108 23 chr20 23560910 23561347 -43106658 - LTR16C LTR ERVL -9 482 9 1493 231 59 0 chr20 23562635 23563041 -43104964 - L1ME2 LINE L1 -9 6155 5726 571 325 126 32 chr20 23563079 23563862 -43104143 + L2 LINE L2 2446 3309 -4 1658 109 0 0 chr20 23564850 23565071 -43102934 - L1PA8 LINE L1 -2 6170 5950 225 169 22 45 chr20 23565477 23565566 -43102439 + (TATAA)n Simple_repeat Simple_repeat 3 89 0 643 274 146 5 chr20 23565953 23566172 -43101833 + MIR SINE MIR 12 261 -1 302 321 68 34 chr20 23566201 23566256 -43101749 - L1ME2 LINE L1 -377 5744 5692 2337 139 16 22 chr20 23566256 23566622 -43101383 + THE1B LTR MaLR 1 364 0 302 321 68 34 chr20 23566622 23566831 -43101174 - L1ME2 LINE L1 -429 5692 5471 208 343 180 13 chr20 23566874 23567113 -43100892 + L3 LINE CR1 640 918 -659 21 0 0 0 chr20 23567468 23567489 -43100516 + AT_rich Low_complexity Low_complexity 1 21 0 1608 231 79 25 chr20 23567491 23567971 -43100034 - L1ME1 LINE L1 -65 6101 5596 4430 118 22 6 chr20 23568474 23569154 -43098851 + L1MA5A LINE L1 5584 6274 -23 31 0 0 0 chr20 23569978 23570009 -43097996 + AT_rich Low_complexity Low_complexity 1 31 0 180 0 0 0 chr20 23570660 23570680 -43097325 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 655 242 39 39 chr20 23570967 23571149 -43096856 + MER5A DNA MER1_type 8 189 0 21 0 0 0 chr20 23571196 23571217 -43096788 + AT_rich Low_complexity Low_complexity 1 21 0 705 259 149 19 chr20 23571228 23571544 -43096461 + LTR16C LTR ERVL 135 491 0 686 328 38 0 chr20 23571678 23571916 -43096089 + MIR SINE MIR 15 261 -1 491 321 14 24 chr20 23572133 23572345 -43095660 - MIR SINE MIR -49 213 4 651 261 103 0 chr20 23572375 23572540 -43095465 - MER5A DNA MER1_type -1 188 7 813 229 11 90 chr20 23572679 23572946 -43095059 - MLT1J LTR MaLR -58 453 208 532 141 7 74 chr20 23572956 23573091 -43094914 - L1MB2 LINE L1 -2 6169 6044 396 294 114 43 chr20 23573839 23574023 -43093982 + MIR3 SINE MIR 5 201 -7 247 211 19 0 chr20 23574569 23574621 -43093384 - MIR SINE MIR -102 160 108 183 80 0 0 chr20 23574779 23574804 -43093201 + (CATATA)n Simple_repeat Simple_repeat 2 26 0 1989 137 0 7 chr20 23574812 23575096 -43092909 - AluSx SINE Alu -30 282 1 1772 145 35 14 chr20 23575216 23575498 -43092507 - AluSx SINE Alu -18 294 7 25 0 0 0 chr20 23575564 23575589 -43092416 + AT_rich Low_complexity Low_complexity 1 25 0 278 362 158 26 chr20 23577491 23577795 -43090210 + L2 LINE L2 2920 3263 -9 1713 158 13 26 chr20 23577890 23578200 -43089805 - AluJb SINE Alu -6 306 1 938 205 0 0 chr20 23578343 23578504 -43089501 - FRAM SINE Alu -15 161 1 249 213 31 106 chr20 23578587 23578747 -43089258 - HAL1b LINE L1 -10 1338 1191 233 269 148 53 chr20 23579582 23579865 -43088140 - L1MC/D LINE L1 -2244 5564 5255 299 242 62 16 chr20 23580107 23580259 -43087746 + MSTC LTR MaLR 45 250 -146 2423 81 0 0 chr20 23580303 23580600 -43087405 + AluY SINE Alu 1 297 -14 199 284 185 75 chr20 23582116 23582200 -43085805 + L2 LINE L2 2564 2637 -677 1091 207 231 42 chr20 23582200 23582533 -43085472 - MSTD LTR MaLR 0 396 1 199 284 185 75 chr20 23582533 23582821 -43085184 + L2 LINE L2 2637 2977 -337 2039 101 69 0 chr20 23583108 23583396 -43084609 + AluY SINE Alu 1 308 -3 835 150 0 0 chr20 23583481 23583601 -43084404 + FLAM_C SINE Alu 1 120 -13 410 256 103 37 chr20 23583616 23583858 -43084147 - L1ME4a LINE L1 -192 5929 5672 1213 276 89 3 chr20 23584057 23584448 -43083557 - LTR16C LTR ERVL 0 491 67 301 68 14 54 chr20 23584644 23584718 -43083287 + (TAA)n Simple_repeat Simple_repeat 2 72 0 303 218 16 105 chr20 23584755 23584879 -43083126 - MIR SINE MIR -50 212 100 787 238 35 6 chr20 23585908 23586080 -43081925 - MER5A DNA MER1_type -12 177 1 292 245 0 48 chr20 23586348 23586465 -43081540 + MIR SINE MIR 45 131 -77 384 302 163 14 chr20 23587851 23588066 -43079939 - LTR16C LTR ERVL 0 491 245 428 302 71 14 chr20 23588646 23588811 -43079194 - MIR3 SINE MIR -22 186 10 911 263 45 45 chr20 23589056 23589413 -43078592 + L1ME3 LINE L1 5805 6161 -1 729 299 101 5 chr20 23589524 23589959 -43078046 + LTR16C LTR ERVL 5 481 -10 1902 152 30 0 chr20 23591129 23591426 -43076579 - AluJb SINE Alu -6 306 1 3090 201 19 13 chr20 23591552 23592168 -43075837 - MLT1E3 LTR MaLR -4 620 1 257 282 94 8 chr20 23592353 23592444 -43075561 - Charlie8 DNA MER1_type -2207 210 105 1414 216 3 23 chr20 23592444 23592749 -43075256 - AluJo SINE Alu -13 299 1 257 282 94 8 chr20 23592749 23592774 -43075231 - Charlie8 DNA MER1_type -2312 105 84 3447 180 8 18 chr20 23592776 23593387 -43074618 + L1MB3 LINE L1 21 625 -5759 11752 202 30 18 chr20 23593387 23598166 -43069839 + L1MB3 LINE L1 1606 6418 -1 226 250 33 0 chr20 23598173 23598233 -43069772 - Charlie8 DNA MER1_type -2323 94 33 1747 168 10 16 chr20 23598249 23598559 -43069446 - AluJo SINE Alu -4 308 1 196 269 58 19 chr20 23598649 23598701 -43069304 - L2 LINE L2 -15 3298 3245 1302 275 63 28 chr20 23598701 23599313 -43068692 - L2 LINE L2 -250 3063 2421 33 0 0 0 chr20 23599350 23599383 -43068622 + AT_rich Low_complexity Low_complexity 1 33 0 832 242 46 33 chr20 23599834 23600140 -43067865 - L1M4 LINE L1 -2673 3473 3164 450 190 183 49 chr20 23600343 23600458 -43067547 - L2 LINE L2 -5 3308 3169 3791 142 0 2 chr20 23600458 23600986 -43067019 - MER1A DNA MER1_type 0 527 1 450 190 183 49 chr20 23600986 23601012 -43066993 - L2 LINE L2 -144 3169 3148 804 259 29 17 chr20 23602539 23602778 -43065227 + L1ME3 LINE L1 5921 6162 0 38684 83 9 13 chr20 23602873 23605949 -43062056 + L1PA6 LINE L1 12 3054 -3121 2618 65 0 0 chr20 23605949 23606256 -43061749 + AluY SINE Alu 1 307 -4 38684 83 9 13 chr20 23606256 23609367 -43058638 + L1PA6 LINE L1 3054 6175 0 6917 78 10 0 chr20 23610384 23611468 -43056537 + L1PB1 LINE L1 5053 6146 -5 683 218 4 0 chr20 23612403 23612641 -43055364 + (TG)n Simple_repeat Simple_repeat 1 239 0 1628 178 49 0 chr20 23614719 23615023 -43052982 - MLT1B LTR MaLR 0 390 72 1082 123 45 0 chr20 23615045 23615200 -43052805 - AluYb8 SINE Alu -24 294 133 469 154 26 0 chr20 23615209 23615287 -43052718 - MLT1B LTR MaLR -310 80 1 712 138 0 0 chr20 23619144 23619253 -43048752 - AluJ SINE Alu -2 310 202 297 223 0 29 chr20 23619253 23619331 -43048674 - AluJo SINE Alu -140 162 96 215 293 129 35 chr20 23620408 23620521 -43047484 - L2 LINE L2 -1 3312 3189 629 252 145 15 chr20 23620521 23620783 -43047222 - MER5C DNA MER1_type 0 324 29 246 293 92 66 chr20 23620864 23621137 -43046868 + MLT1L LTR MaLR 1 280 -335 2361 100 10 189 chr20 23621179 23621699 -43046306 - MLT2A2 LTR ERVL 0 453 27 4108 165 24 6 chr20 23621907 23622621 -43045384 - L1MC2 LINE L1 -148 6196 5470 209 315 18 18 chr20 23623366 23623477 -43044528 + GA-rich Low_complexity Low_complexity 5 115 0 251 317 39 10 chr20 23624663 23624767 -43043238 + MIR SINE MIR 106 212 -50 882 237 5 5 chr20 23624796 23624982 -43043023 + MER3 DNA MER1_type 24 209 0 18368 181 31 11 chr20 23626742 23626992 -43041013 - L1PA15 LINE L1 -328 6488 6244 2526 71 0 3 chr20 23626992 23627303 -43040702 + AluY SINE Alu 1 310 -1 18368 181 31 11 chr20 23627303 23633369 -43034636 - L1PA15 LINE L1 -572 6244 1 2285 148 11 11 chr20 23634060 23634449 -43033556 - MLT1B LTR MaLR -10 616 1 246 267 0 17 chr20 23634776 23634836 -43033169 - LTR33 LTR ERVL 0 521 463 672 261 153 42 chr20 23634881 23635214 -43032791 - LTR33 LTR ERVL -151 370 1 200 180 40 0 chr20 23635431 23635481 -43032524 + (TA)n Simple_repeat Simple_repeat 1 52 0 2702 126 27 50 chr20 23635647 23636085 -43031920 - MSTA LTR MaLR 0 428 1 236 242 143 11 chr20 23636589 23636680 -43031325 - MLT1H LTR MaLR -102 447 345 884 216 11 26 chr20 23636892 23637082 -43030923 - L1MA10 LINE L1 -2 6332 6146 43212 37 21 1 chr20 23637083 23643113 -43024892 + L1PA2 LINE L1 1 6155 0 1202 189 21 4 chr20 23643137 23643370 -43024635 - L1MB1 LINE L1 -13 6155 5919 1306 197 3 2 chr20 23643382 23643691 -43024314 + MLT1A1 LTR MaLR 8 365 0 2204 153 94 24 chr20 23643691 23644117 -43023888 - L1MB1 LINE L1 -392 5920 5465 1671 143 215 41 chr20 23644649 23644690 -43023315 - MSTB LTR MaLR 0 426 393 2474 71 3 0 chr20 23644690 23644999 -43023006 + AluY SINE Alu 1 310 -1 1671 143 215 41 chr20 23644999 23645320 -43022685 - MSTB LTR MaLR -33 393 1 840 240 111 49 chr20 23645726 23646014 -43021991 + LTR16C LTR ERVL 186 491 0 22 0 0 0 chr20 23646134 23646156 -43021849 + AT_rich Low_complexity Low_complexity 1 22 0 1386 279 72 64 chr20 23646274 23646833 -43021172 + MLT1G1 LTR MaLR 33 595 0 1990 143 3 7 chr20 23647037 23647344 -43020661 + AluSc SINE Alu 2 307 -2 199 213 0 21 chr20 23649069 23649116 -43018889 - L2 LINE L2 -4 3309 3264 2043 153 37 59 chr20 23649153 23649557 -43018448 - MER57A LTR ERV1 0 403 9 1649 163 7 17 chr20 23649557 23649852 -43018153 - AluJo SINE Alu -16 296 5 338 325 75 6 chr20 23651346 23651506 -43016499 + MIR SINE MIR 22 192 -70 185 200 20 80 chr20 23651560 23651610 -43016395 - L2 LINE L2 -36 3236 3190 30 27 0 0 chr20 23651634 23651671 -43016334 + AT_rich Low_complexity Low_complexity 1 37 0 2880 112 49 11 chr20 23651689 23652136 -43015869 - L1MA4A LINE L1 -5 6298 5835 2297 105 0 0 chr20 23652201 23652495 -43015510 + AluSx SINE Alu 9 302 -10 524 322 88 31 chr20 23652512 23652739 -43015266 + MER115 DNA AcHobo 4 243 -450 701 280 41 45 chr20 23652813 23653127 -43014878 + MER115 DNA AcHobo 356 668 -25 200 333 58 8 chr20 23653228 23653348 -43014657 + L2 LINE L2 2926 3051 -221 1113 142 0 0 chr20 23653567 23653729 -43014276 - AluSg/x SINE Alu -20 292 131 635 286 56 8 chr20 23654195 23654447 -43013558 + LTR16C LTR ERVL 228 491 0 318 296 0 0 chr20 23655271 23655342 -43012663 - MIR3 SINE MIR -52 156 86 3439 210 81 23 chr20 23655502 23656801 -43011204 - L1ME1 LINE L1 -5 6161 4786 274 206 137 20 chr20 23657743 23657845 -43010160 - MLT1K LTR MaLR -146 442 329 786 280 41 25 chr20 23658135 23658539 -43009466 + MLT1H LTR MaLR 23 398 -11 312 302 62 0 chr20 23658584 23658680 -43009325 + L2 LINE L2 3195 3296 -17 1048 252 162 56 chr20 23658888 23659332 -43008673 + LTR16C LTR ERVL 1 491 0 236 238 0 32 chr20 23659504 23659567 -43008438 - Charlie7 DNA MER1_type -1888 724 664 864 253 93 21 chr20 23659664 23659953 -43008052 - Charlie7 DNA MER1_type -2115 497 188 43277 36 21 1 chr20 23660281 23666309 -43001696 - L1PA2 LINE L1 -4 6151 2 260 154 0 0 chr20 23668362 23668401 -42999604 - MIR SINE MIR -118 144 106 555 287 55 59 chr20 23668567 23668821 -42999184 + MIR SINE MIR 10 262 0 236 229 0 0 chr20 23668989 23669037 -42998968 - MLT1I LTR MaLR -264 145 98 1052 249 75 43 chr20 23670323 23670697 -42997308 + LTR16C LTR ERVL 106 491 0 270 336 84 28 chr20 23671509 23671652 -42996353 - L2 LINE L2 0 3272 3122 233 363 0 0 chr20 23671723 23671803 -42996202 - MIR SINE MIR -95 113 34 268 185 93 0 chr20 23671823 23671877 -42996128 + L2 LINE L2 3251 3309 -4 5641 89 23 0 chr20 23671883 23672658 -42995347 - L1PA13 LINE L1 -1 6162 5370 252 279 33 0 chr20 23672709 23672770 -42995235 + MIR SINE MIR 200 262 0 1135 187 35 98 chr20 23672809 23673124 -42994881 + MER2 DNA MER2_type 51 345 0 247 254 36 0 chr20 23673221 23673303 -42994702 + CT-rich Low_complexity Low_complexity 4 143 0 1092 287 64 12 chr20 23673372 23673776 -42994229 + LTR16B LTR ERVL 35 459 -5 2280 113 0 0 chr20 23673941 23674250 -42993755 + AluSc SINE Alu 1 309 0 305 244 37 0 chr20 23674736 23674818 -42993187 - L1ME LINE L1 -623 5543 5459 1007 245 46 10 chr20 23674822 23675246 -42992759 - L1ME LINE L1 -664 5498 5060 184 222 0 28 chr20 23675374 23675410 -42992595 + MIR SINE MIR 34 68 -194 * 558 252 82 25 chr20 23675407 23675566 -42992439 - MIR SINE MIR -79 183 16 289 301 155 28 chr20 23675503 23675716 -42992289 + MIR SINE MIR 5 244 -18 * 21 43 0 22 chr20 23675750 23675767 -42992238 + AT_rich Low_complexity Low_complexity 1 17 -28 1687 154 39 0 chr20 23675767 23676046 -42991959 + AluJb SINE Alu 1 290 -22 21 43 0 22 chr20 23676046 23676074 -42991931 + AT_rich Low_complexity Low_complexity 17 45 0 731 225 41 6 chr20 23676526 23676695 -42991310 - HAL1 LINE L1 -803 1704 1530 1672 167 54 0 chr20 23676698 23676974 -42991031 - AluJb SINE Alu -21 291 1 404 250 150 14 chr20 23677043 23677183 -42990822 + L2 LINE L2 2489 2647 -667 1119 185 5 5 chr20 23677265 23677460 -42990545 + AluSx SINE Alu 2 196 -116 208 221 7 37 chr20 23677525 23677601 -42990404 + GA-rich Low_complexity Low_complexity 1 129 0 285 369 68 19 chr20 23677621 23677827 -42990178 + MIR SINE MIR 28 243 -19 182 354 32 44 chr20 23678006 23678164 -42989841 + MIR SINE MIR 64 219 -43 27560 32 3 2 chr20 23678416 23682533 -42985472 + L1PA3 LINE L1 2035 6152 -3 235 237 0 0 chr20 23682705 23682764 -42985241 + A-rich Low_complexity Low_complexity 1 59 0 407 366 44 0 chr20 23683074 23683279 -42984726 + LTR16A LTR ERVL 159 372 -78 354 198 0 27 chr20 23683301 23683412 -42984593 + (TA)n Simple_repeat Simple_repeat 2 109 0 1439 214 3 27 chr20 23683429 23683724 -42984281 - AluJo SINE Alu -24 288 1 236 254 0 75 chr20 23684339 23684406 -42983599 + MLT1L LTR MaLR 4 65 -550 640 224 39 34 chr20 23684475 23684654 -42983351 - MER3 DNA MER1_type -29 180 1 301 258 144 12 chr20 23684850 23685017 -42982988 + MLT1L LTR MaLR 423 611 -4 285 213 65 19 chr20 23685195 23685303 -42982702 - L1ME4a LINE L1 -15 6106 5994 305 165 25 63 chr20 23685814 23685893 -42982112 + L2 LINE L2 3172 3247 -25 454 269 71 28 chr20 23686748 23686842 -42981163 - LTR16A LTR ERVL 0 450 362 360 43 0 0 chr20 23686842 23686888 -42981117 + (TAA)n Simple_repeat Simple_repeat 2 47 0 454 269 71 28 chr20 23686888 23686975 -42981030 - LTR16A LTR ERVL -88 362 261 3398 170 14 2 chr20 23686982 23687576 -42980429 + MER6A DNA MER2_type 1 601 -4 2313 209 45 4 chr20 23687580 23688524 -42979481 - MER45B DNA AcHobo -14 1026 1 451 304 33 37 chr20 23688526 23688794 -42979211 - LTR16A LTR ERVL -178 272 12 355 257 175 29 chr20 23689387 23689558 -42978447 - L2 LINE L2 0 3313 3118 1879 119 0 0 chr20 23689698 23689958 -42978047 - AluSx SINE Alu -52 260 1 224 214 243 14 chr20 23689962 23690032 -42977973 + MIR SINE MIR 104 189 -73 1066 254 75 80 chr20 23690036 23690473 -42977532 - LTR16C LTR ERVL 0 491 57 187 270 143 0 chr20 23690532 23690595 -42977410 + MIR SINE MIR 191 262 0 225 0 0 0 chr20 23690653 23690678 -42977327 + (CA)n Simple_repeat Simple_repeat 2 26 0 488 231 43 87 chr20 23695103 23695311 -42972694 + MER63A DNA MER1_type 1 199 -11 249 313 73 0 chr20 23695570 23695666 -42972339 - MIR SINE MIR -18 244 142 306 220 17 0 chr20 23698060 23698119 -42969886 - L2 LINE L2 -7 3306 3247 335 296 131 38 chr20 23698434 23698701 -42969304 + LTR16C LTR ERVL 198 489 -2 264 246 227 82 chr20 23698706 23699120 -42968885 - L2 LINE L2 -145 3168 2729 13692 185 38 28 chr20 23700384 23707300 -42960705 - L1MA4A LINE L1 -6 6999 1 7830 219 94 46 chr20 23707502 23708980 -42959025 - L1M3 LINE L1 -627 5789 4383 2169 119 0 16 chr20 23708980 23709292 -42958713 + AluSx SINE Alu 1 307 -5 7830 219 94 46 chr20 23709292 23709738 -42958267 - L1M3 LINE L1 -2033 4383 3960 2505 77 0 0 chr20 23709738 23710049 -42957956 - AluY SINE Alu 0 311 1 7830 219 94 46 chr20 23710049 23710994 -42957011 - L1M3 LINE L1 -2456 3960 3061 1200 191 17 4 chr20 23710994 23711225 -42956780 + MER46A DNA MER2_type 1 234 -2 7830 219 94 46 chr20 23711225 23711519 -42956486 - L1M3 LINE L1 -3355 3061 2782 2420 25 7 3 chr20 23711519 23711842 -42956163 + AluY SINE Alu 1 324 0 7830 219 94 46 chr20 23711842 23712189 -42955816 - L1M3 LINE L1 -3634 2782 2115 897 189 36 5 chr20 23712178 23712374 -42955631 - L1M3 LINE L1 -380 5800 5599 * 2135 241 48 34 chr20 23712369 23713222 -42954783 - L1M3 LINE L1 -4262 2122 1170 21 0 0 0 chr20 23713230 23713251 -42954754 + AT_rich Low_complexity Low_complexity 1 21 0 1298 82 25 10 chr20 23713258 23713454 -42954551 - L1MA5A LINE L1 -4 6293 6095 391 329 81 55 chr20 23713455 23713960 -42954045 - L1M4 LINE L1 -3429 2717 2200 1980 180 21 7 chr20 23714243 23714670 -42953335 - L1MB4 LINE L1 -6 6174 5742 961 274 24 5 chr20 23714671 23715050 -42952955 - L1 LINE L1 -2622 3524 3139 1054 213 57 0 chr20 23715105 23715316 -42952689 + MER58A DNA MER1_type 2 224 0 188 178 188 50 chr20 23716808 23716909 -42951096 + MIR SINE MIR 131 245 -17 358 279 124 41 chr20 23717839 23717889 -42950116 + L1ME4a LINE L1 5431 5475 -646 1535 187 7 111 chr20 23717889 23718296 -42949709 + MLT1A1 LTR MaLR 1 365 0 358 279 124 41 chr20 23718296 23718683 -42949322 + L1ME4a LINE L1 5475 5901 -220 22 70 0 0 chr20 23718704 23718747 -42949258 + AT_rich Low_complexity Low_complexity 1 43 0 290 26 26 0 chr20 23720276 23720315 -42947690 + (TG)n Simple_repeat Simple_repeat 2 41 0 1008 257 174 3 chr20 23722257 23722596 -42945409 - MLT1I LTR MaLR -10 399 3 465 297 81 24 chr20 23722652 23722861 -42945144 - MIR SINE MIR -37 225 5 965 219 81 3 chr20 23723078 23723361 -42944644 + MER33 DNA MER1_type 1 305 -19 1989 111 42 7 chr20 23723361 23723650 -42944355 - AluSx SINE Alu -13 299 1 8200 184 11 7 chr20 23723654 23726722 -42941283 - L1PB2 LINE L1 -1 6150 3073 218 216 14 0 chr20 23730954 23731028 -42936977 + (TG)n Simple_repeat Simple_repeat 2 76 0 199 214 146 22 chr20 23731194 23731283 -42936722 - MIR SINE MIR -76 132 33 269 322 117 10 chr20 23732355 23732560 -42935445 + MLT1H LTR MaLR 23 249 -300 247 195 171 0 chr20 23732724 23732806 -42935199 + MLT1I LTR MaLR 281 376 -33 300 307 175 0 chr20 23733039 23733153 -42934852 - L2 LINE L2 -1 3271 3138 426 291 8 16 chr20 23733264 23733391 -42934614 - L2 LINE L2 -1811 1503 1378 2169 129 10 0 chr20 23734269 23734579 -42933426 + AluSp SINE Alu 1 313 0 2437 40 40 3 chr20 23734614 23734914 -42933091 - AluY SINE Alu 0 311 1 183 284 119 37 chr20 23735199 23735308 -42932697 + MIR SINE MIR 94 211 -51 1575 232 48 63 chr20 23735967 23736471 -42931534 + MLT1D LTR MaLR 6 501 -4 349 247 184 36 chr20 23736483 23736706 -42931299 + LTR16C LTR ERVL 230 485 -6 479 265 41 71 chr20 23737053 23737321 -42930684 + MLT1K LTR MaLR 329 588 0 864 299 101 20 chr20 23738000 23738368 -42929637 + L1MEc LINE L1 1487 1923 -4473 845 227 37 19 chr20 23738368 23738484 -42929521 + MER58A DNA MER1_type 5 128 -2292 348 24 0 0 chr20 23738484 23738525 -42929480 + (TC)n Simple_repeat Simple_repeat 2 42 0 845 227 37 19 chr20 23738525 23738624 -42929381 + MER58A DNA MER1_type 128 224 0 864 299 101 20 chr20 23738624 23738851 -42929154 + L1MEc LINE L1 1923 2130 -4266 548 280 113 11 chr20 23740702 23740888 -42927117 - MIR SINE MIR -48 214 10 2171 125 3 0 chr20 23741057 23741353 -42926652 - AluSx SINE Alu -15 297 1 254 400 46 31 chr20 23741487 23741747 -42926258 - L2 LINE L2 -8 3264 3001 307 299 119 34 chr20 23741782 23741992 -42926013 + MIR SINE MIR 4 220 -42 198 329 161 13 chr20 23742205 23742354 -42925651 + MIR SINE MIR 91 261 -1 224 180 20 20 chr20 23742396 23742446 -42925559 + L2 LINE L2 782 831 -2483 573 283 44 19 chr20 23742492 23742697 -42925308 + MIR SINE MIR 41 250 -12 727 286 84 80 chr20 23742720 23743132 -42924873 + L2 LINE L2 2567 2976 -337 223 49 49 0 chr20 23743132 23743173 -42924832 + (TTG)n Simple_repeat Simple_repeat 2 44 0 1899 125 36 4 chr20 23743177 23743456 -42924549 - AluSx SINE Alu -24 288 1 727 286 84 80 chr20 23743456 23743783 -42924222 + L2 LINE L2 2978 3309 -4 371 319 8 0 chr20 23743781 23743900 -42924105 + MIR SINE MIR 131 250 -12 * 332 100 0 0 chr20 23744014 23744064 -42923941 + MADE1 DNA Mariner 31 80 0 2046 103 7 36 chr20 23744532 23744833 -42923172 - AluSx SINE Alu -20 292 1 6611 206 26 60 chr20 23744975 23746687 -42921318 + L1MA4A LINE L1 565 2218 -4631 * 9156 180 26 13 chr20 23746684 23749845 -42918160 + L1MA4A LINE L1 3792 7004 -1 2277 88 3 55 chr20 23750242 23750572 -42917433 - AluSp SINE Alu 0 313 1 242 352 22 0 chr20 23750698 23750789 -42917216 + MIR3 SINE MIR 86 178 -30 186 308 115 13 chr20 23750992 23751070 -42916935 + L2 LINE L2 3162 3247 -25 2464 167 29 9 chr20 23752029 23752477 -42915528 + MSTB2 LTR MaLR 1 457 0 2441 96 3 0 chr20 23752526 23752838 -42915167 + AluSp SINE Alu 1 313 0 204 88 176 0 chr20 23754478 23754512 -42913493 - MER5C DNA MER1_type 0 324 285 440 262 41 33 chr20 23754676 23754798 -42913207 - MER5C DNA MER1_type -200 124 2 40 83 0 0 chr20 23755129 23755225 -42912780 + AT_rich Low_complexity Low_complexity 1 96 0 230 313 15 0 chr20 23755458 23755525 -42912480 - Charlie8 DNA MER1_type -2141 276 209 224 109 65 0 chr20 23755546 23755592 -42912413 + A-rich Low_complexity Low_complexity 2 50 0 727 249 98 0 chr20 23756803 23757028 -42910977 - LTR16C LTR ERVL 0 491 245 754 296 22 13 chr20 23757689 23757919 -42910086 - MIR SINE MIR 0 262 31 23 0 0 0 chr20 23758337 23758360 -42909645 + AT_rich Low_complexity Low_complexity 1 23 0 1412 192 4 11 chr20 23758571 23758831 -42909174 - AluJo SINE Alu -54 258 1 41744 45 0 3 chr20 23758860 23765024 -42902981 + L1PA3 LINE L1 7 6155 0 3093 41 0 13 chr20 23765040 23765431 -42902574 + L1PA3 LINE L1 5770 6155 0 1983 77 0 0 chr20 23767551 23767797 -42900208 - AluY SINE Alu -10 301 56 4897 189 62 65 chr20 23768024 23768330 -42899675 - Zaphod DNA AcHobo -6 4025 3720 2410 103 0 0 chr20 23768330 23768641 -42899364 - AluSx SINE Alu -1 311 1 4897 189 62 65 chr20 23768641 23769956 -42898049 - Zaphod DNA AcHobo -311 3720 2409 900 230 127 57 chr20 23769953 23770132 -42897873 - Zaphod DNA AcHobo -3246 785 620 * 7383 38 0 0 chr20 23770132 23771046 -42896959 - L1PA4 LINE L1 -8 6147 5234 900 230 127 57 chr20 23771046 23771392 -42896613 - Zaphod DNA AcHobo -3411 620 223 278 267 58 23 chr20 23771585 23771671 -42896334 + L2 LINE L2 3223 3311 -2 210 216 0 0 chr20 23772353 23772390 -42895615 + (CAG)n Simple_repeat Simple_repeat 2 38 0 1789 94 41 0 chr20 23772469 23772736 -42895269 - L1PB1 LINE L1 -1 6150 5873 15024 170 88 2 chr20 23772741 23776923 -42891082 - L1PBa LINE L1 -2316 4546 1 1512 260 103 29 chr20 23777397 23777951 -42890054 - L1ME3A LINE L1 -35 6135 5541 311 318 148 32 chr20 23778595 23778812 -42889193 - MIR SINE MIR 0 262 21 1989 141 3 3 chr20 23779083 23779406 -42888599 + AluSx SINE Alu 1 323 0 337 69 0 69 chr20 23779674 23779732 -42888273 + MADE1 DNA Mariner 27 80 0 237 145 0 105 chr20 23779771 23779847 -42888158 - L1MC4 LINE L1 -1339 6703 6636 245 188 62 0 chr20 23779884 23779948 -42888057 + L1MC4 LINE L1 6636 6703 -1339 1075 151 0 6 chr20 23779963 23780122 -42887883 - FAM SINE Alu -16 169 12 402 261 11 0 chr20 23780254 23780346 -42887659 + MER5A DNA MER1_type 4 96 -93 1659 157 29 4 chr20 23780370 23780650 -42887355 - L1MC1 LINE L1 0 6333 6047 808 218 24 6 chr20 23781276 23781446 -42886559 - MER5A DNA MER1_type 0 189 17 333 288 128 59 chr20 23782480 23782786 -42885219 + LTR16C LTR ERVL 1 327 -164 421 37 37 73 chr20 23784155 23784264 -42883741 + (CTAAT)n Simple_repeat Simple_repeat 4 108 0 2711 151 39 0 chr20 23784888 23785319 -42882686 - L1PB4 LINE L1 0 6156 5709 2386 109 0 0 chr20 23785680 23785992 -42882013 - AluSx SINE Alu 0 312 1 2266 101 3 16 chr20 23786507 23786814 -42881191 - AluSg1 SINE Alu -6 303 1 322 279 13 13 chr20 23787981 23788060 -42879945 - MER5B DNA MER1_type -44 134 56 439 185 74 0 chr20 23788073 23788154 -42879851 + MER58B DNA MER1_type 252 338 -3 509 270 65 50 chr20 23788557 23788757 -42879248 - MIR SINE MIR -25 237 35 482 292 39 13 chr20 23789166 23789320 -42878685 + MIR SINE MIR 15 172 -90 246 32 0 0 chr20 23789517 23789548 -42878457 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 44517 46 2 1 chr20 23789889 23796042 -42871963 - L1PA3 LINE L1 0 6155 1 195 42 0 0 chr20 23796079 23796103 -42871902 + (TG)n Simple_repeat Simple_repeat 2 25 0 23 0 0 0 chr20 23796515 23796538 -42871467 + AT_rich Low_complexity Low_complexity 1 23 0 299 137 14 68 chr20 23796766 23796839 -42871166 + Charlie5 DNA MER1_type 56 124 -2488 1716 177 50 21 chr20 23796841 23797219 -42870786 + Charlie5 DNA MER1_type 2236 2624 0 507 242 52 33 chr20 23797447 23797600 -42870405 - MIR SINE MIR -17 245 90 638 108 0 10 chr20 23798378 23798480 -42869525 + (TCTCC)n Simple_repeat Simple_repeat 4 104 0 * 1151 57 23 17 chr20 23798449 23798535 -42869470 + (TTTC)n Simple_repeat Simple_repeat 1 264 0 1151 57 23 17 chr20 23798535 23798712 -42869293 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 331 314 77 12 chr20 23798872 23799041 -42868964 - MIR3 SINE MIR -26 182 3 237 196 0 0 chr20 23799059 23799115 -42868890 + (TG)n Simple_repeat Simple_repeat 1 56 0 709 255 103 11 chr20 23799117 23799443 -42868562 - L1MC4 LINE L1 -97 7711 7431 4961 197 29 21 chr20 23799940 23800057 -42867948 - L1MC2 LINE L1 -2 6342 6227 1741 78 102 0 chr20 23800057 23800301 -42867704 - AluY SINE Alu -6 305 37 4961 197 29 21 chr20 23800301 23801660 -42866345 - L1MC2 LINE L1 -117 6227 4847 1751 232 116 17 chr20 23801625 23802748 -42865257 + L1MDb LINE L1 783 1995 -4411 * 1428 194 4 4 chr20 23802754 23803006 -42864999 - L1PB4 LINE L1 0 6156 5905 1030 92 7 26 chr20 23803015 23803167 -42864838 + L1PB4 LINE L1 5786 5934 -222 295 247 45 11 chr20 23803606 23803695 -42864310 + MLT1K LTR MaLR 375 466 -122 364 274 26 17 chr20 23804178 23804295 -42863710 + MER94 DNA DNA 16 133 -1 451 297 12 19 chr20 23804325 23804486 -42863519 + MIR SINE MIR 22 182 -78 210 140 0 60 chr20 23805995 23806045 -42861960 + (TTTC)n Simple_repeat Simple_repeat 4 50 0 26 50 0 0 chr20 23806286 23806326 -42861679 + AT_rich Low_complexity Low_complexity 1 40 0 482 293 92 37 chr20 23806537 23806810 -42861195 + MLT1J LTR MaLR 222 509 -2 28 61 0 0 chr20 23806811 23806860 -42861145 + AT_rich Low_complexity Low_complexity 1 49 0 246 217 33 0 chr20 23806864 23806924 -42861081 + (TAGA)n Simple_repeat Simple_repeat 4 65 0 780 175 17 0 chr20 23806935 23807100 -42860905 + (TGGA)n Simple_repeat Simple_repeat 1 171 -9 2717 99 6 0 chr20 23807100 23807452 -42860553 + THE1A LTR MaLR 1 354 -1 780 175 17 0 chr20 23807452 23807463 -42860542 + (TGGA)n Simple_repeat Simple_repeat 171 180 0 643 219 102 0 chr20 23809072 23809209 -42858796 - MER5A DNA MER1_type -38 151 1 812 203 52 0 chr20 23810441 23810630 -42857375 - MIR SINE MIR -34 228 34 256 284 99 37 chr20 23811189 23811351 -42856654 + LTR33A LTR ERVL 117 288 -235 252 77 0 0 chr20 23811941 23811980 -42856025 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 398 159 11 0 chr20 23813151 23813239 -42854766 + (TA)n Simple_repeat Simple_repeat 2 90 0 184 338 0 13 chr20 23814051 23814128 -42853877 + MIR SINE MIR 79 154 -108 854 213 33 0 chr20 23815283 23815466 -42852539 - MER5A DNA MER1_type 0 189 1 264 359 0 0 chr20 23815513 23815605 -42852400 + MIR3 SINE MIR 90 181 -27 311 164 30 30 chr20 23817298 23817365 -42850640 - MER5A DNA MER1_type -118 71 5 2186 130 0 0 chr20 23817436 23817735 -42850270 - AluSx SINE Alu -13 299 1 2274 100 20 0 chr20 23819538 23819839 -42848166 - AluSx SINE Alu -5 307 1 403 234 195 19 chr20 23819961 23820115 -42847890 - MER5A DNA MER1_type 0 189 9 385 202 0 85 chr20 23820884 23820978 -42847027 - MIR3 SINE MIR 0 208 123 1770 217 48 17 chr20 23821877 23822296 -42845709 + L1MC3 LINE L1 7354 7785 0 391 274 28 95 chr20 23822365 23822544 -42845461 - MIR SINE MIR -65 197 31 222 320 93 10 chr20 23822942 23823039 -42844966 - MER5A DNA MER1_type -21 168 64 813 182 110 38 chr20 23823187 23823396 -42844609 + MER58A DNA MER1_type 1 224 0 183 333 30 20 chr20 23823398 23823457 -42844548 + L3 LINE CR1 860 919 -658 379 289 107 0 chr20 23823457 23823578 -42844427 - MER5A DNA MER1_type -1 188 55 1453 199 45 68 chr20 23823731 23824128 -42843877 + MLT1B LTR MaLR 3 390 0 405 221 100 7 chr20 23824296 23824311 -42843694 - L1MA10 LINE L1 -4 6330 6316 3079 197 86 36 chr20 23824311 23825806 -42842199 - L1ME1 LINE L1 -10 6156 4597 4032 212 61 13 chr20 23826052 23827653 -42840352 - L1MB5 LINE L1 -6 6168 4497 * 6940 67 1 1 chr20 23827651 23828548 -42839457 - L1PA6 LINE L1 0 6154 5258 2364 41 0 0 chr20 23828547 23828842 -42839163 + L1PA6 LINE L1 4945 5239 -907 * 3096 235 61 44 chr20 23828876 23829657 -42838348 - L1MB5 LINE L1 -2579 3567 2801 2084 122 0 26 chr20 23829657 23829960 -42838045 + AluSg SINE Alu 1 295 -15 3096 235 61 44 chr20 23829960 23830257 -42837748 - L1MB5 LINE L1 -3345 2801 2463 1500 252 16 38 chr20 23830257 23830710 -42837295 - LTR47B LTR ERVL 0 443 1 3096 235 61 44 chr20 23830710 23830862 -42837143 - L1MB5 LINE L1 -3683 2463 2315 3166 124 6 4 chr20 23830884 23831384 -42836621 - L1PB1 LINE L1 -5 6146 5646 533 157 53 10 chr20 23831419 23831480 -42836525 + (TA)n Simple_repeat Simple_repeat 1 58 -433 227 30 0 30 chr20 23831480 23831513 -42836492 + (TATAA)n Simple_repeat Simple_repeat 3 34 0 533 157 53 10 chr20 23831513 23831890 -42836115 + (TA)n Simple_repeat Simple_repeat 58 491 0 287 203 0 53 chr20 23831912 23832099 -42835906 + (TA)n Simple_repeat Simple_repeat 1 177 0 527 152 44 15 chr20 23832135 23832851 -42835154 + (TA)n Simple_repeat Simple_repeat 1 737 0 568 160 29 17 chr20 23832919 23833094 -42834911 + (TA)n Simple_repeat Simple_repeat 2 178 0 301 188 10 89 chr20 23833094 23833195 -42834810 - L1MC4 LINE L1 -1339 6703 6611 631 111 62 4 chr20 23833274 23833520 -42834485 + (TA)n Simple_repeat Simple_repeat 1 260 0 25 0 0 0 chr20 23833670 23833695 -42834310 + AT_rich Low_complexity Low_complexity 1 25 0 231 218 115 11 chr20 23836754 23836841 -42831164 - Zaphod DNA AcHobo -3344 687 592 1382 272 76 21 chr20 23836850 23837284 -42830721 - Zaphod DNA AcHobo -3414 617 160 667 247 60 42 chr20 23837472 23837857 -42830148 - L1M4b LINE L1 -3991 3147 2756 4634 269 75 26 chr20 23838219 23839009 -42828996 - L1M4b LINE L1 -4571 2388 1638 1240 177 4 33 chr20 23839009 23839252 -42828753 - MER46A DNA MER2_type 0 236 1 4634 269 75 26 chr20 23839252 23840578 -42827427 - L1M4b LINE L1 -5321 1638 155 1879 141 0 40 chr20 23840578 23840882 -42827123 - AluY SINE Alu -19 292 1 4634 269 75 26 chr20 23840882 23841031 -42826974 - L1M4b LINE L1 -6804 155 15 876 233 3 50 chr20 23841048 23841331 -42826674 - L1M4c LINE L1 -4731 2228 1959 310 231 19 96 chr20 23841335 23841439 -42826566 + L1M4b LINE L1 812 907 -5952 22 0 0 0 chr20 23841439 23841461 -42826544 + AT_rich Low_complexity Low_complexity 1 22 0 3854 179 46 21 chr20 23841534 23842340 -42825665 - LTR1B LTR ERV1 0 826 1 2216 251 54 74 chr20 23842492 23843315 -42824690 - L1M4c LINE L1 -4906 1949 1111 2909 70 0 3 chr20 23843315 23843701 -42824304 - L1PA5 LINE L1 0 6154 5770 2216 251 54 74 chr20 23843701 23844774 -42823231 - L1M4c LINE L1 -5744 1111 11 460 259 37 7 chr20 23844781 23844916 -42823089 - L1MC5 LINE L1 -1131 6830 6692 30 77 0 0 chr20 23845287 23845352 -42822653 + AT_rich Low_complexity Low_complexity 1 65 0 24 77 0 0 chr20 23845454 23845506 -42822499 + AT_rich Low_complexity Low_complexity 1 52 0 2386 71 7 3 chr20 23846468 23846776 -42821229 + AluY SINE Alu 1 309 -2 23 0 0 0 chr20 23847923 23847946 -42820059 + AT_rich Low_complexity Low_complexity 1 23 0 1461 180 104 56 chr20 23848921 23849333 -42818672 + MSTB1 LTR MaLR 1 432 0 231 36 0 0 chr20 23849699 23849727 -42818278 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 243 333 48 0 chr20 23850785 23850890 -42817115 - L2 LINE L2 -1 3312 3203 183 114 0 0 chr20 23851118 23851153 -42816852 + (TG)n Simple_repeat Simple_repeat 2 36 0 387 203 6 22 chr20 23851176 23851358 -42816647 + GA-rich Low_complexity Low_complexity 2 180 0 207 314 196 29 chr20 23851384 23852182 -42815823 - L2 LINE L2 -448 2866 1936 1080 263 45 53 chr20 23852761 23853248 -42814757 + LTR16C LTR ERVL 5 487 -4 337 249 14 145 chr20 23854358 23854579 -42813426 + MIR3 SINE MIR 16 207 -1 2075 136 0 7 chr20 23854597 23854907 -42813098 - AluSg SINE Alu -2 308 1 2034 216 61 19 chr20 23855276 23855817 -42812188 - L1MC4 LINE L1 -124 7918 7355 341 326 76 37 chr20 23856979 23857416 -42810589 + L3 LINE CR1 1050 1572 -5 267 221 52 13 chr20 23857915 23857949 -42810056 + MER116 DNA Mariner 1 32 -48 626 152 40 0 chr20 23857949 23858074 -42809931 - L1MD1 LINE L1 -1 6241 6112 267 221 52 13 chr20 23858074 23858116 -42809889 + MER116 DNA Mariner 32 80 0 768 192 0 0 chr20 23858513 23858643 -42809362 + FLAM_A SINE Alu 1 130 -3 470 286 125 37 chr20 23859137 23859490 -42808515 + L3 LINE CR1 784 1167 -410 287 188 0 14 chr20 23860023 23860092 -42807913 + CT-rich Low_complexity Low_complexity 2 69 0 250 260 14 27 chr20 23860153 23860226 -42807779 - L2 LINE L2 -67 3205 3134 6529 148 18 22 chr20 23860450 23860949 -42807056 - L1P LINE L1 -2163 3983 3483 1739 157 73 20 chr20 23860949 23861305 -42806700 - THE1C LTR MaLR 0 375 1 6529 148 18 22 chr20 23861305 23862024 -42805981 - L1P LINE L1 -2663 3483 2770 7920 138 24 9 chr20 23862036 23864042 -42803963 + L1PA11 LINE L1 4011 6039 -135 42937 50 3 3 chr20 23864064 23868709 -42799296 + L1PA4 LINE L1 7 4648 -1507 2541 50 3 0 chr20 23868709 23869011 -42798994 + AluY SINE Alu 1 303 -8 42937 50 3 3 chr20 23869011 23870519 -42797486 + L1PA4 LINE L1 4648 6155 0 1044 93 0 7 chr20 23870519 23870664 -42797341 + L1PA11 LINE L1 6026 6174 0 236 319 32 19 chr20 23871025 23871338 -42796667 - L1M4 LINE L1 -2974 3172 2856 674 313 0 6 chr20 23871519 23871698 -42796307 + MER8 DNA MER2_type 2 179 -60 1286 123 0 30 chr20 23872493 23872696 -42795309 - MER107 DNA MER1_type 0 197 1 1333 323 103 22 chr20 23872760 23873543 -42794462 + L2 LINE L2 1790 2636 -678 609 331 82 58 chr20 23873541 23874098 -42793907 - L2 LINE L2 0 3313 2736 * 1643 227 37 0 chr20 23874136 23874541 -42793464 - L1MC3 LINE L1 -21 7764 7345 416 313 113 54 chr20 23874727 23875344 -42792661 + L1M4 LINE L1 3036 3688 -2458 2083 100 0 0 chr20 23875646 23875915 -42792090 + AluSq SINE Alu 33 301 -12 10739 228 42 28 chr20 23876851 23881061 -42786944 + L1M2 LINE L1 2265 6259 -1306 583 147 63 119 chr20 23881058 23881183 -42786822 + L1MA9 LINE L1 5644 5758 -539 * 23210 34 1 0 chr20 23881183 23884761 -42783244 + L1PA4 LINE L1 2571 6149 -6 583 147 63 119 chr20 23884761 23884803 -42783202 + L1MA9 LINE L1 5758 5801 -496 223 200 22 0 chr20 23884817 23884862 -42783143 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 2209 163 83 39 chr20 23884865 23885373 -42782632 + L1MA9 LINE L1 5783 6312 0 227 155 35 0 chr20 23885509 23885567 -42782438 + (TTATA)n Simple_repeat Simple_repeat 4 63 0 1014 247 71 33 chr20 23885658 23886325 -42781680 + L1M2 LINE L1 6413 7103 -480 2127 158 8 19 chr20 23886326 23886693 -42781312 - THE1B LTR MaLR -1 363 1 5131 95 32 0 chr20 23886693 23887387 -42780618 - THE1B-int LTR MaLR 0 1580 865 925 79 0 0 chr20 23887377 23887503 -42780502 + THE1-int LTR MaLR 1426 1551 -29 * 294 56 0 0 chr20 23887503 23887539 -42780466 - THE1B LTR MaLR -328 36 1 1416 133 14 0 chr20 23887610 23887821 -42780184 + AluSp SINE Alu 81 294 -19 183 156 0 0 chr20 23887821 23887853 -42780152 + GA-rich Low_complexity Low_complexity 1 32 0 566 204 244 6 chr20 23887906 23888082 -42779923 + L1ME3 LINE L1 5939 6156 -6 307 278 65 78 chr20 23888205 23888450 -42779555 - L1M4 LINE L1 -3627 2519 2278 4008 169 46 72 chr20 23888474 23889655 -42778350 - L1MB3 LINE L1 -29 6154 4998 24 0 0 0 chr20 23889748 23889772 -42778233 + AT_rich Low_complexity Low_complexity 1 24 0 245 260 118 31 chr20 23890056 23890183 -42777822 - HAL1b LINE L1 -806 542 405 1663 175 0 11 chr20 23890283 23890552 -42777453 - AluJb SINE Alu -44 268 3 264 337 43 0 chr20 23890658 23890750 -42777255 - L2 LINE L2 -43 3229 3134 338 326 45 53 chr20 23890996 23891260 -42776745 - L2 LINE L2 -508 2806 2545 329 273 0 0 chr20 23891435 23891512 -42776493 - L2 LINE L2 -6 3307 3231 540 306 92 75 chr20 23891523 23892069 -42775936 - L2 LINE L2 -976 2338 1784 662 298 62 9 chr20 23892087 23892312 -42775693 + MIR SINE MIR 24 260 -2 269 253 8 16 chr20 23892349 23892578 -42775427 + CT-rich Low_complexity Low_complexity 1 227 0 242 179 18 0 chr20 23892974 23893030 -42774975 + (TA)n Simple_repeat Simple_repeat 2 58 0 1635 186 10 16 chr20 23893654 23893961 -42774044 - AluJb SINE Alu -7 305 1 22 35 0 0 chr20 23894837 23894866 -42773139 + AT_rich Low_complexity Low_complexity 1 29 0 486 75 0 0 chr20 23895310 23895377 -42772628 + (TG)n Simple_repeat Simple_repeat 2 68 0 507 326 78 35 chr20 23896237 23896581 -42771424 - LTR16C LTR ERVL -92 399 41 568 270 77 73 chr20 23898463 23898737 -42769268 + MLT1H1 LTR MaLR 1 275 -280 299 261 54 0 chr20 23898823 23898915 -42769090 + MLT1H1 LTR MaLR 459 555 0 2392 154 158 9 chr20 23900651 23901099 -42766906 - MLT2B2 LTR ERVL 0 515 1 284 256 139 0 chr20 23901099 23901185 -42766820 + LTR16A LTR ERVL 4 101 -349 2460 63 0 3 chr20 23901303 23901602 -42766403 - AluY SINE Alu -12 299 2 307 247 0 13 chr20 23902690 23902767 -42765238 + MIR SINE MIR 68 143 -119 223 320 107 0 chr20 23904334 23904409 -42763596 - L2 LINE L2 0 3313 3231 682 297 168 18 chr20 23904573 23905234 -42762771 - L2 LINE L2 -261 3052 2284 745 257 75 0 chr20 23905234 23905448 -42762557 + MER46C DNA MER2_type 1 230 -108 252 254 101 29 chr20 23906930 23907139 -42760866 - L1ME4a LINE L1 -17 6104 5881 32 0 0 0 chr20 23907250 23907282 -42760723 + AT_rich Low_complexity Low_complexity 1 32 0 311 186 17 0 chr20 23907477 23907536 -42760469 - L1ME4a LINE L1 -252 5869 5810 404 301 55 27 chr20 23907812 23907958 -42760047 - MER91A DNA MER1_type -37 159 10 288 0 0 0 chr20 23908270 23908302 -42759703 + (TAA)n Simple_repeat Simple_repeat 2 33 0 529 236 260 8 chr20 23908962 23909220 -42758785 - L1MC4 LINE L1 0 8042 7720 856 219 16 37 chr20 23909222 23909464 -42758541 + L1MC4 LINE L1 7353 7589 -453 499 213 50 35 chr20 23910344 23910485 -42757520 - MER69 DNA AcHobo -4 2522 2380 283 171 18 36 chr20 23913955 23914039 -42753966 + A-rich Low_complexity Low_complexity 5 88 -25 1768 108 88 30 chr20 23914039 23914334 -42753671 + AluSx SINE Alu 1 312 0 283 171 18 36 chr20 23914334 23914360 -42753645 + A-rich Low_complexity Low_complexity 88 113 0 22 70 0 0 chr20 23917053 23917096 -42750909 + AT_rich Low_complexity Low_complexity 1 43 0 186 188 0 62 chr20 23918167 23918215 -42749790 + L2 LINE L2 3225 3269 -3 21 0 0 0 chr20 23918367 23918388 -42749617 + AT_rich Low_complexity Low_complexity 1 21 0 488 284 138 37 chr20 23918640 23918858 -42749147 - MIR SINE MIR -21 241 2 519 324 51 30 chr20 23918868 23919239 -42748766 - L1MC4a LINE L1 -1897 5911 5533 323 268 71 16 chr20 23919333 23919460 -42748545 - L1MC4a LINE L1 -827 5319 5186 497 289 57 11 chr20 23920069 23920332 -42747673 + L1ME LINE L1 5531 5805 -316 509 283 154 41 chr20 23920365 23920683 -42747322 + MLT1I LTR MaLR 2 355 -54 470 239 68 8 chr20 23921562 23921679 -42746326 - MER5C DNA MER1_type -200 124 1 1920 96 4 0 chr20 23921902 23922172 -42745833 - L1PB1 LINE L1 -2 6800 6530 13439 217 44 10 chr20 23922173 23922194 -42745811 - L1PB1 LINE L1 -328 6474 6455 207 100 0 0 chr20 23922194 23922224 -42745781 + (TG)n Simple_repeat Simple_repeat 2 31 0 * 452 32 0 16 chr20 23922223 23922286 -42745719 + (TA)n Simple_repeat Simple_repeat 1 62 0 13439 217 44 10 chr20 23922224 23926558 -42741447 - L1PB1 LINE L1 -347 6455 2042 439 225 72 0 chr20 23926582 23926720 -42741285 + L1M4 LINE L1 2269 2416 -3730 * 1947 218 45 12 chr20 23926695 23927674 -42740331 + L1M3d LINE L1 1 1177 -4714 24 0 0 0 chr20 23927675 23927699 -42740306 + AT_rich Low_complexity Low_complexity 1 24 0 1531 228 58 11 chr20 23927768 23928216 -42739789 + L1M3d LINE L1 2266 2734 -3236 637 196 24 183 chr20 23928231 23928608 -42739397 + L1M3d LINE L1 3554 3870 -2100 274 297 81 27 chr20 23928704 23928889 -42739116 + MIR SINE MIR 40 234 -28 254 370 41 27 chr20 23930101 23930247 -42737758 + MER5B DNA MER1_type 30 177 -1 7810 179 40 26 chr20 23930258 23930424 -42737581 - L1MC3 LINE L1 -1 7784 7622 216 97 0 0 chr20 23930424 23930455 -42737550 + (ATG)n Simple_repeat Simple_repeat 2 32 0 7810 179 40 26 chr20 23930455 23931922 -42736083 - L1MC3 LINE L1 -163 7622 6128 693 135 45 8 chr20 23931933 23932066 -42735939 - L1MB5 LINE L1 0 6174 6037 3671 252 75 13 chr20 23932068 23933937 -42734068 - L1M4 LINE L1 -2462 3920 1923 14515 198 25 17 chr20 23934037 23934337 -42733668 - L1PB1 LINE L1 0 6867 6571 2251 107 3 0 chr20 23934337 23934636 -42733369 + AluSp SINE Alu 1 300 -13 14515 198 25 17 chr20 23934636 23935209 -42732796 - L1PB1 LINE L1 -296 6571 6004 2302 105 0 0 chr20 23935209 23935514 -42732491 - AluSg SINE Alu -5 305 1 14515 198 25 17 chr20 23935514 23939783 -42728222 - L1PB1 LINE L1 -863 6004 1697 277 260 0 0 chr20 23939778 23939851 -42728154 - L1M4 LINE L1 -4738 1646 1574 * 4510 184 11 17 chr20 23939842 23941389 -42726616 + L1PA16 LINE L1 4316 5851 -315 8701 216 45 15 chr20 23941397 23943554 -42724451 + L1PA13 LINE L1 1060 3280 -2866 38135 84 9 7 chr20 23943565 23949701 -42718304 + L1PA6 LINE L1 11 6154 0 11468 155 16 4 chr20 23949690 23952457 -42715548 + L1PA13 LINE L1 3256 6152 -11 * 2343 157 2 2 chr20 23952461 23952855 -42715150 + L1PA16 LINE L1 5773 6166 0 2348 251 94 33 chr20 23952869 23953809 -42714196 - L1M4 LINE L1 -4842 1700 704 315 328 82 41 chr20 23954038 23954233 -42713772 - Charlie8 DNA MER1_type -2063 354 152 * 1167 277 79 39 chr20 23954230 23954789 -42713216 + MLT1G1 LTR MaLR 9 589 -6 315 226 86 0 chr20 23954795 23954888 -42713117 - Charlie8 DNA MER1_type -2257 160 60 764 127 14 7 chr20 23954899 23955041 -42712964 + L1MA4A LINE L1 6145 6287 -16 340 326 76 29 chr20 23955123 23955295 -42712710 - MIR SINE MIR -46 216 37 603 0 0 0 chr20 23955948 23956015 -42711990 + (GAAAA)n Simple_repeat Simple_repeat 5 71 0 483 260 50 79 chr20 23956857 23957188 -42710817 + MLT1I LTR MaLR 94 384 -25 691 309 41 16 chr20 23957480 23957726 -42710279 + MIR SINE MIR 5 256 -6 6907 62 0 0 chr20 23957862 23958835 -42709170 - L1PA7 LINE L1 -2 6152 5185 4288 76 29 40 chr20 23958837 23959288 -42708717 + L1P LINE L1 4547 4990 -1156 5494 19 0 0 chr20 23959288 23959909 -42708096 + L1PA3 LINE L1 5526 6151 -4 4288 76 29 40 chr20 23959909 23960105 -42707900 + L1P LINE L1 4990 5187 -959 4733 170 14 6 chr20 23961351 23962208 -42705797 - L1MB3 LINE L1 -1 6182 5319 628 231 102 5 chr20 23962212 23962398 -42705607 - L1MA4 LINE L1 -11 6289 6086 279 132 38 0 chr20 23962414 23962467 -42705538 - L1MB3 LINE L1 -847 5333 5279 765 293 44 1 chr20 23962968 23963185 -42704820 - MIR SINE MIR -6 256 33 242 283 101 0 chr20 23964224 23964323 -42703682 - MIR SINE MIR -101 161 53 188 330 143 22 chr20 23964958 23965188 -42702817 - MIR SINE MIR 0 262 5 411 214 200 21 chr20 23968104 23968244 -42699761 + MER5B DNA MER1_type 7 171 -7 235 296 11 45 chr20 23968627 23968715 -42699290 - L2 LINE L2 0 3272 3188 21 0 0 0 chr20 23971032 23971053 -42696952 + AT_rich Low_complexity Low_complexity 1 21 0 1523 126 39 12 chr20 23971224 23971479 -42696526 - L1MA5A LINE L1 -5 6292 6031 2083 164 9 6 chr20 23973409 23973757 -42694248 - MLT1A1 LTR MaLR -4 361 13 246 290 68 74 chr20 23973846 23974022 -42693983 - MER5B DNA MER1_type -2 176 2 1820 172 39 0 chr20 23974332 23974617 -42693388 - AluJb SINE Alu -16 296 1 453 336 150 18 chr20 23974865 23975553 -42692452 + L2 LINE L2 2511 3307 -6 436 264 159 15 chr20 23975785 23975986 -42692019 - MIR SINE MIR -30 232 3 252 308 75 15 chr20 23976097 23976230 -42691775 - L3 LINE CR1 -687 890 750 348 333 23 23 chr20 23976252 23976381 -42691624 + MIR SINE MIR 20 148 -114 673 246 16 37 chr20 23977381 23977568 -42690437 + L1ME LINE L1 5543 5725 -445 560 110 258 18 chr20 23977568 23977699 -42690306 - MLT1B LTR MaLR 0 390 268 294 197 66 0 chr20 23978327 23978388 -42689617 - MER63 DNA MER1_type -85 751 687 188 284 130 86 chr20 23978630 23978968 -42689037 - L2 LINE L2 -10 3262 2910 291 207 181 69 chr20 23979130 23979246 -42688759 + HsTC2 DNA Tc2 23 151 -1747 * 1137 243 42 52 chr20 23979239 23979663 -42688342 + HsTC2 DNA Tc2 1288 1883 -15 278 399 31 21 chr20 23980368 23980561 -42687444 + MIR SINE MIR 46 240 -22 324 277 69 63 chr20 23980647 23980806 -42687199 - MIR3 SINE MIR -29 179 20 309 307 10 0 chr20 23981697 23981798 -42686207 + L1ME1 LINE L1 6050 6151 -15 2264 103 3 3 chr20 23982677 23982978 -42685027 - AluSq SINE Alu -12 301 1 645 263 68 19 chr20 23982998 23983203 -42684802 + LTR16C LTR ERVL 277 491 0 328 320 0 0 chr20 23983218 23983318 -42684687 + (CA)n Simple_repeat Simple_repeat 1 100 0 423 326 13 35 chr20 23984035 23984262 -42683743 - MIR SINE MIR -10 252 31 188 217 65 0 chr20 23984941 23984987 -42683018 - L2 LINE L2 -206 3066 3018 474 252 79 0 chr20 23985053 23985180 -42682825 + MER5B DNA MER1_type 3 139 -39 217 233 0 0 chr20 23986853 23986896 -42681109 + CT-rich Low_complexity Low_complexity 3 45 0 223 273 136 0 chr20 23987157 23987223 -42680782 + MIR SINE MIR 73 147 -61 201 315 41 0 chr20 23987224 23987297 -42680708 + L2 LINE L2 3011 3086 -227 385 49 16 16 chr20 23987343 23987404 -42680601 + (TTTC)n Simple_repeat Simple_repeat 3 63 0 2106 108 3 7 chr20 23987442 23987884 -42680121 - AluSq SINE Alu 0 441 1 184 343 27 0 chr20 23987940 23988013 -42679992 + L2 LINE L2 3239 3313 0 217 217 0 22 chr20 23988745 23988791 -42679214 + CT-rich Low_complexity Low_complexity 2 46 0 734 253 78 55 chr20 23989474 23989818 -42678187 + LTR16A LTR ERVL 18 369 -81 472 232 96 43 chr20 23990104 23990325 -42677680 + MLT1E1 LTR MaLR 57 321 -272 387 317 12 12 chr20 23990331 23990498 -42677507 + LTR33 LTR ERVL 355 521 0 284 180 16 16 chr20 23992111 23992172 -42675833 + MIR SINE MIR 77 137 -125 554 271 96 39 chr20 23992218 23992447 -42675558 + MIR SINE MIR 21 262 0 201 108 0 0 chr20 23993480 23993517 -42674488 + (T)n Simple_repeat Simple_repeat 1 37 0 351 0 0 0 chr20 23994353 23994392 -42673613 + (TG)n Simple_repeat Simple_repeat 2 40 0 189 311 151 57 chr20 23995054 23995160 -42672845 - MIR SINE MIR -77 131 16 186 325 64 45 chr20 23995879 23996036 -42671969 + MER5A DNA MER1_type 2 161 -28 264 292 133 71 chr20 23996713 23996939 -42671066 - L2 LINE L2 0 3272 3033 280 245 47 28 chr20 23997137 23997243 -42670762 - L1ME4a LINE L1 -177 5944 5837 337 268 112 64 chr20 23999094 23999389 -42668616 - L1ME4a LINE L1 -23 6098 5790 230 273 0 0 chr20 23999406 23999461 -42668544 - L1P4 LINE L1 -414 5747 5693 199 347 28 28 chr20 23999541 23999613 -42668392 - MIR SINE MIR -55 153 82 193 286 65 0 chr20 23999810 23999887 -42668118 - MIR SINE MIR -70 192 111 388 271 14 28 chr20 23999972 24000116 -42667889 + GA-rich Low_complexity Low_complexity 1 142 0 287 260 14 0 chr20 24000258 24000331 -42667674 - MER116 DNA Mariner -1 79 6 284 333 67 0 chr20 24000377 24000482 -42667523 - MIR SINE MIR -122 140 29 21 36 0 0 chr20 24001160 24001188 -42666817 + AT_rich Low_complexity Low_complexity 1 28 0 254 288 243 32 chr20 24001566 24001879 -42666126 + L2 LINE L2 2027 2405 -909 1346 280 132 0 chr20 24001957 24002360 -42665645 - LTR16C LTR ERVL -3 488 33 516 317 101 59 chr20 24002371 24003164 -42664841 + L2 LINE L2 2443 3272 0 191 309 62 31 chr20 24003505 24003602 -42664403 + L2 LINE L2 3209 3308 -5 21 36 0 0 chr20 24003631 24003659 -42664346 + AT_rich Low_complexity Low_complexity 1 28 0 2643 143 71 22 chr20 24003659 24004163 -42663842 + L1MB7 LINE L1 5637 6165 -19 416 339 47 6 chr20 24004194 24004365 -42663640 + MIR SINE MIR 3 180 -82 2685 50 0 0 chr20 24005029 24005347 -42662658 - L1PA5 LINE L1 -373 5782 5465 3297 45 0 5 chr20 24005347 24005717 -42662288 + L1PA5 LINE L1 5775 6153 -1 308 208 0 14 chr20 24006774 24006846 -42661159 + MLT1K LTR MaLR 175 245 -343 248 307 23 0 chr20 24007403 24007491 -42660514 + MARNA DNA Mariner 97 186 -400 238 341 116 8 chr20 24007552 24007598 -42660407 - MIR SINE MIR -81 181 141 372 22 0 0 chr20 24007598 24007643 -42660362 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 238 341 116 8 chr20 24007643 24007725 -42660280 - MIR SINE MIR -121 141 39 193 292 31 31 chr20 24008131 24008227 -42659778 - MIR SINE MIR -34 228 133 214 195 0 0 chr20 24010052 24010093 -42657912 + CT-rich Low_complexity Low_complexity 2 42 0 255 318 26 71 chr20 24012220 24012374 -42655631 + MIR SINE MIR 24 170 -92 317 315 84 0 chr20 24013947 24014090 -42653915 - L2 LINE L2 -1062 2252 2098 435 279 33 66 chr20 24015977 24016044 -42651961 + MER5A DNA MER1_type 7 75 -114 1554 187 19 29 chr20 24016044 24016359 -42651646 + AluJo SINE Alu 1 312 0 435 279 33 66 chr20 24016359 24016474 -42651531 + MER5A DNA MER1_type 75 183 -6 1916 114 73 0 chr20 24016689 24016962 -42651043 - AluSx SINE Alu -18 294 2 570 300 141 19 chr20 24017003 24017617 -42650388 + L2 LINE L2 2520 3196 -117 3851 198 54 54 chr20 24017705 24018658 -42649347 - L1MA9 LINE L1 -30 6282 5327 1688 85 9 13 chr20 24018658 24018882 -42649123 - AluY SINE Alu -15 296 74 3851 198 54 54 chr20 24018882 24018957 -42649048 - L1MA9 LINE L1 -984 5328 5254 867 138 26 53 chr20 24019002 24019053 -42648952 - MLT1A1 LTR MaLR -212 153 102 1998 211 45 79 chr20 24019053 24019625 -42648380 - MLT2B3 LTR ERVL -1 553 1 867 138 26 53 chr20 24019625 24019725 -42648280 - MLT1A1 LTR MaLR -263 102 6 269 200 0 0 chr20 24019750 24019800 -42648205 + L2 LINE L2 3223 3272 0 240 143 0 0 chr20 24023280 24023322 -42644683 + (TG)n Simple_repeat Simple_repeat 2 43 0 420 275 28 0 chr20 24023810 24023919 -42644086 - L2 LINE L2 0 3313 3202 390 303 30 39 chr20 24024274 24024453 -42643552 + L1ME4a LINE L1 5597 5775 -346 731 74 0 11 chr20 24024453 24024548 -42643457 - L1PA7 LINE L1 -5 6149 6056 390 303 30 39 chr20 24024548 24024602 -42643403 + L1ME4a LINE L1 5775 5828 -293 252 213 98 0 chr20 24024663 24024724 -42643281 + L3 LINE CR1 327 393 -1184 199 364 81 20 chr20 24024820 24024919 -42643086 - L2 LINE L2 -52 3220 3116 202 304 29 0 chr20 24024947 24025016 -42642989 - L2 LINE L2 -42 3230 3160 7716 55 0 0 chr20 24026313 24027899 -42640106 + L1PA5 LINE L1 4549 6152 -2 201 94 0 0 chr20 24027903 24027935 -42640070 + (TCTA)n Simple_repeat Simple_repeat 2 33 0 21 36 0 0 chr20 24028086 24028114 -42639891 + AT_rich Low_complexity Low_complexity 1 28 0 208 0 62 0 chr20 24028900 24028932 -42639073 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 450 291 51 0 chr20 24029291 24029408 -42638597 + L2 LINE L2 3149 3271 -1 853 241 58 0 chr20 24029925 24030132 -42637873 + MER58A DNA MER1_type 1 219 -5 24 32 0 0 chr20 24030476 24030507 -42637498 + AT_rich Low_complexity Low_complexity 1 31 0 22 88 0 0 chr20 24030564 24030621 -42637384 + AT_rich Low_complexity Low_complexity 1 57 0 378 350 54 23 chr20 24030863 24031251 -42636754 - L1ME3 LINE L1 -224 5938 5539 2216 164 86 46 chr20 24032083 24032539 -42635466 + MER101 LTR ERV1 1 474 0 270 250 0 0 chr20 24033804 24033868 -42634137 - MIR SINE MIR -64 144 81 689 296 94 32 chr20 24035369 24035741 -42632264 - LTR16C LTR ERVL 0 491 97 223 174 0 43 chr20 24038970 24039039 -42628966 + (TATATG)n Simple_repeat Simple_repeat 6 71 0 741 242 62 19 chr20 24040303 24040559 -42627446 + LTR16A1 LTR ERVL 191 457 0 1601 32 0 0 chr20 24040559 24040744 -42627261 - L1PA8 LINE L1 -308 5864 5680 2495 70 0 0 chr20 24040744 24041045 -42626960 + L1PA8 LINE L1 5872 6172 0 183 80 0 0 chr20 24041709 24041734 -42626271 + (A)n Simple_repeat Simple_repeat 1 25 0 186 374 114 8 chr20 24041982 24042113 -42625892 + MIR SINE MIR 51 195 -67 500 322 38 28 chr20 24042246 24042334 -42625671 - LTR16C LTR ERVL -33 458 372 2527 114 5 40 chr20 24042334 24042711 -42625294 + THE1B LTR MaLR 1 364 0 500 322 38 28 chr20 24042711 24042833 -42625172 - LTR16C LTR ERVL -119 372 246 323 339 30 24 chr20 24042880 24043045 -42624960 - LTR16C LTR ERVL -325 166 1 246 329 49 12 chr20 24043633 24043715 -42624290 + MIR SINE MIR 85 169 -93 552 211 23 23 chr20 24043715 24043843 -42624162 + MER3 DNA MER1_type 1 128 -81 2438 124 16 32 chr20 24043859 24044229 -42623776 + THE1B LTR MaLR 1 364 0 391 175 0 0 chr20 24044333 24044396 -42623609 + MER3 DNA MER1_type 145 207 -2 2281 72 0 36 chr20 24046171 24046477 -42621528 - AluY SINE Alu -15 296 2 1271 189 40 4 chr20 24047261 24047489 -42620516 - MER46A DNA MER2_type 0 236 1 210 37 0 0 chr20 24047498 24047525 -42620480 + (T)n Simple_repeat Simple_repeat 1 27 0 7311 28 19 0 chr20 24047545 24048398 -42619607 - L1PA3 LINE L1 -1 6154 5286 4437 33 0 0 chr20 24048398 24048919 -42619086 + L1PA3 LINE L1 4747 5267 -879 4003 158 20 16 chr20 24048926 24049628 -42618377 - L1MB3 LINE L1 -3 6180 5476 194 313 141 0 chr20 24049823 24049887 -42618118 - L3 LINE CR1 -1004 573 501 189 121 0 0 chr20 24050239 24050272 -42617733 + (TATATG)n Simple_repeat Simple_repeat 3 35 0 981 218 64 0 chr20 24050356 24050576 -42617429 + MIR SINE MIR 8 241 -21 209 178 67 0 chr20 24050542 24050587 -42617418 + L2 LINE L2 3210 3257 -15 * 619 366 133 29 chr20 24050696 24051318 -42616687 - L3 LINE CR1 -72 1505 746 198 0 0 0 chr20 24051318 24051340 -42616665 + (TA)n Simple_repeat Simple_repeat 2 23 0 619 366 133 29 chr20 24051340 24051678 -42616327 - L3 LINE CR1 -831 746 445 786 227 38 108 chr20 24051871 24052056 -42615949 - MER5A DNA MER1_type -5 173 2 488 329 151 19 chr20 24053169 24053494 -42614511 + L2 LINE L2 2946 3313 0 462 301 53 29 chr20 24054008 24054217 -42613788 - MIR SINE MIR -26 236 23 21 0 0 0 chr20 24056388 24056409 -42611596 + AT_rich Low_complexity Low_complexity 1 21 0 634 299 62 61 chr20 24056717 24057681 -42610324 - L1ME3A LINE L1 -281 5889 4938 1621 206 30 43 chr20 24057681 24058049 -42609956 + MLT1A1 LTR MaLR 1 363 -2 634 299 62 61 chr20 24058049 24058242 -42609763 - L1ME3A LINE L1 -1232 4938 4747 28 29 0 0 chr20 24058773 24058808 -42609197 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr20 24058961 24058986 -42609019 + AT_rich Low_complexity Low_complexity 1 25 0 2049 140 0 31 chr20 24059245 24059566 -42608439 - AluJb SINE Alu -1 311 1 24 32 0 0 chr20 24059761 24059792 -42608213 + AT_rich Low_complexity Low_complexity 1 31 0 449 261 0 27 chr20 24059932 24060043 -42607962 + MER8 DNA MER2_type 6 113 -126 208 241 11 81 chr20 24060263 24060350 -42607655 - MER5A DNA MER1_type -18 171 91 26 30 0 0 chr20 24060678 24060711 -42607294 + AT_rich Low_complexity Low_complexity 1 33 0 2269 133 80 0 chr20 24061434 24061771 -42606234 - THE1B LTR MaLR 0 364 1 275 49 24 0 chr20 24061921 24061962 -42606043 + (CA)n Simple_repeat Simple_repeat 1 42 0 1264 240 133 7 chr20 24062805 24063226 -42604779 + L1MC4 LINE L1 7360 7833 -209 186 304 43 33 chr20 24064043 24064135 -42603870 + MIR SINE MIR 39 131 -131 418 219 102 7 chr20 24064213 24064350 -42603655 - L1ME3A LINE L1 -1 6169 6020 188 200 18 0 chr20 24064564 24064619 -42603386 + GA-rich Low_complexity Low_complexity 1 56 0 217 229 49 16 chr20 24065338 24065399 -42602606 + MIR SINE MIR 28 90 -172 181 222 32 0 chr20 24065566 24065629 -42602376 + CT-rich Low_complexity Low_complexity 2 66 0 292 267 86 9 chr20 24065785 24065890 -42602115 + MER5B DNA MER1_type 66 178 0 2080 113 0 35 chr20 24066645 24066963 -42601042 + AluSx SINE Alu 1 307 -5 1862 147 27 0 chr20 24067166 24067465 -42600540 - AluJb SINE Alu -5 307 1 677 258 67 0 chr20 24068408 24068617 -42599388 + L1MC4 LINE L1 6705 6927 -1115 678 181 42 0 chr20 24068623 24068767 -42599238 - MLT1B LTR MaLR -1 389 240 185 191 0 21 chr20 24068899 24068946 -42599059 + GA-rich Low_complexity Low_complexity 2 47 0 306 269 43 97 chr20 24069019 24069205 -42598800 + L1MC4 LINE L1 7836 8011 -31 254 291 45 9 chr20 24069506 24069616 -42598389 + L2 LINE L2 3186 3299 -14 500 299 76 5 chr20 24069832 24070029 -42597976 + MIR SINE MIR 40 250 -12 281 295 18 0 chr20 24070564 24070676 -42597329 + Charlie2 DNA MER1_type 1 114 -2668 250 267 0 13 chr20 24070724 24070799 -42597206 + Charlie2 DNA MER1_type 230 303 -2559 228 35 0 0 chr20 24071908 24071937 -42596068 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 312 281 55 16 chr20 24072088 24072216 -42595789 + MIR SINE MIR 41 173 -89 189 194 28 0 chr20 24072219 24072255 -42595750 + L2 LINE L2 3216 3252 -20 250 335 161 7 chr20 24076480 24076635 -42591370 + MIR3 SINE MIR 11 189 -19 226 277 59 20 chr20 24076618 24076719 -42591286 - MER5B DNA MER1_type -4 174 70 * 1880 126 28 3 chr20 24076949 24077235 -42590770 + AluSx SINE Alu 1 293 -19 942 35 0 0 chr20 24077235 24077349 -42590656 + (TA)n Simple_repeat Simple_repeat 2 115 0 2224 150 25 3 chr20 24078096 24078450 -42589555 + THE1B LTR MaLR 3 364 0 3185 155 13 24 chr20 24078554 24078983 -42589022 - L1MA7 LINE L1 -380 5911 5494 2203 127 0 16 chr20 24078983 24079298 -42588707 - AluSx SINE Alu -2 310 1 3185 155 13 24 chr20 24079298 24079702 -42588303 - L1MA7 LINE L1 -797 5494 5087 676 133 33 53 chr20 24079698 24079848 -42588157 + L1MA7 LINE L1 5902 6048 -243 * 850 147 0 6 chr20 24079866 24080022 -42587983 + L1MA7 LINE L1 6134 6288 -3 387 252 98 42 chr20 24081275 24081418 -42586587 - MER5B DNA MER1_type -3 175 25 334 270 18 18 chr20 24081479 24081590 -42586415 - MIR SINE MIR -127 135 25 354 314 59 29 chr20 24082419 24082623 -42585382 + L2 LINE L2 3104 3313 0 351 139 14 14 chr20 24083156 24083228 -42584777 + MER58 DNA MER1_type 2318 2389 -31 2097 98 70 0 chr20 24084520 24084805 -42583200 + AluSx SINE Alu 1 305 -7 282 125 0 0 chr20 24085449 24085497 -42582508 + (TCCC)n Simple_repeat Simple_repeat 2 49 0 260 273 8 0 chr20 24085486 24085618 -42582387 + CT-rich Low_complexity Low_complexity 3 135 0 * 451 307 7 7 chr20 24086528 24086665 -42581340 - MIR SINE MIR -70 192 56 791 233 158 32 chr20 24086797 24087209 -42580796 - MER110 LTR ERV1 -27 464 1 214 268 0 18 chr20 24087209 24087265 -42580740 - L2 LINE L2 -57 3256 3202 1911 201 28 9 chr20 24087525 24087987 -42580018 + L1MA9 LINE L1 5670 6140 -172 25 31 0 0 chr20 24088252 24088284 -42579721 + AT_rich Low_complexity Low_complexity 1 32 0 623 232 232 3 chr20 24089386 24089696 -42578309 + LTR50 LTR ERVL 3 383 -412 2271 158 18 47 chr20 24089741 24090236 -42577769 + L1MC2 LINE L1 5548 6028 -316 810 189 59 13 chr20 24090241 24090394 -42577611 - FRAM SINE Alu -11 165 6 1551 115 64 45 chr20 24090400 24090712 -42577293 + L1MC2 LINE L1 6018 6335 -9 575 251 98 8 chr20 24091252 24091559 -42576446 + L1MC4 LINE L1 7477 7711 -97 207 229 0 0 chr20 24091561 24091622 -42576383 + (CA)n Simple_repeat Simple_repeat 1 61 0 288 0 0 0 chr20 24091886 24091918 -42576087 + (CA)n Simple_repeat Simple_repeat 2 33 0 225 0 0 0 chr20 24092037 24092062 -42575943 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 199 330 155 0 chr20 24092063 24092166 -42575839 - L2 LINE L2 -13 3259 3141 389 36 18 0 chr20 24092393 24092448 -42575557 + (TTTTG)n Simple_repeat Simple_repeat 1 56 0 2047 112 0 4 chr20 24092448 24092726 -42575279 - AluSg SINE Alu -33 277 1 396 0 0 0 chr20 24092768 24092812 -42575193 + (TG)n Simple_repeat Simple_repeat 1 44 0 196 128 106 64 chr20 24093485 24093532 -42574473 + MER5B DNA MER1_type 1 49 -129 1247 220 115 19 chr20 24093589 24093914 -42574091 + Charlie1b DNA MER1_type 1 389 -2372 1953 122 11 0 chr20 24093914 24094224 -42573781 - AluSx SINE Alu 0 313 1 1247 220 115 19 chr20 24094224 24094374 -42573631 + Charlie1b DNA MER1_type 389 523 0 340 250 0 0 chr20 24094823 24094903 -42573102 - MER116 DNA Mariner 0 80 1 214 182 0 23 chr20 24095349 24095393 -42572612 + MIR SINE MIR 122 164 -98 192 158 53 123 chr20 24095784 24095841 -42572164 + MIR3 SINE MIR 111 163 -45 334 259 273 7 chr20 24096845 24096984 -42571021 + MER5A DNA MER1_type 9 184 -5 313 273 34 0 chr20 24098002 24098090 -42569915 - MIR SINE MIR -100 162 72 481 293 61 35 chr20 24098311 24098509 -42569496 + MIR SINE MIR 35 237 -25 783 208 18 0 chr20 24098891 24099059 -42568946 - MER58B DNA MER1_type 0 341 171 186 188 0 0 chr20 24100276 24100308 -42567697 + L3 LINE CR1 808 839 -738 236 364 43 6 chr20 24101746 24101908 -42566097 + MIR3 SINE MIR 35 202 -6 202 268 122 24 chr20 24102349 24102472 -42565533 + MIR SINE MIR 86 220 -42 283 242 197 0 chr20 24102716 24102814 -42565191 - MIR3 SINE MIR -50 158 48 502 260 219 0 chr20 24103202 24103348 -42564657 - MER5A DNA MER1_type -3 186 9 25 31 0 0 chr20 24103603 24103635 -42564370 + AT_rich Low_complexity Low_complexity 1 32 0 319 237 13 13 chr20 24103761 24103837 -42564168 + MER21B LTR ERV1 15 90 -773 1905 216 144 54 chr20 24103860 24104490 -42563515 + MER21B LTR ERV1 20 706 -157 1313 240 9 7 chr20 24104495 24105082 -42562923 + L1M4c LINE L1 1585 2265 -4119 * 9859 205 25 29 chr20 24105072 24106282 -42561723 + L1PA16 LINE L1 2819 4033 -2369 386 91 212 0 chr20 24106282 24106348 -42561657 - MADE1 DNA Mariner 0 80 1 9859 205 25 29 chr20 24106348 24107918 -42560087 + L1PA16 LINE L1 4033 5587 -815 2147 112 10 3 chr20 24107918 24108213 -42559792 + AluSg SINE Alu 3 299 -11 9859 205 25 29 chr20 24108213 24109017 -42558988 + L1PA16 LINE L1 5587 6393 -9 232 121 193 0 chr20 24109056 24109139 -42558866 + L1M4c LINE L1 2256 2354 -4030 8298 240 53 29 chr20 24109243 24110721 -42557284 + L1M4c LINE L1 2426 3866 -2516 2259 98 10 3 chr20 24110721 24111026 -42556979 + AluSx SINE Alu 1 307 -5 8298 240 53 29 chr20 24111026 24112679 -42555326 + L1M4c LINE L1 3866 5637 -745 1138 260 52 3 chr20 24112692 24113058 -42554947 + L1MB3 LINE L1 4692 5075 -1071 258 143 0 0 chr20 24113089 24113138 -42554867 + (CA)n Simple_repeat Simple_repeat 2 50 0 3778 171 9 3 chr20 24113153 24113847 -42554158 + L1MB3 LINE L1 5484 6181 -2 189 0 0 0 chr20 24114422 24114443 -42553562 + (TTTAA)n Simple_repeat Simple_repeat 2 22 0 282 301 14 0 chr20 24114444 24114517 -42553488 - Charlie8 DNA MER1_type -2343 74 1 643 218 0 15 chr20 24115060 24115193 -42552812 + L1PB4 LINE L1 6012 6142 -14 23 0 0 0 chr20 24115458 24115481 -42552524 + AT_rich Low_complexity Low_complexity 1 23 0 203 0 37 0 chr20 24116029 24116056 -42551949 + (CA)n Simple_repeat Simple_repeat 1 28 0 450 314 99 41 chr20 24117044 24117337 -42550668 - MLT1I LTR MaLR -21 388 79 239 310 115 0 chr20 24120049 24120136 -42547869 + MLT1J LTR MaLR 236 332 -179 603 222 49 0 chr20 24121588 24121732 -42546273 + LTR16C LTR ERVL 339 489 -2 339 96 0 0 chr20 24121732 24121784 -42546221 + (CA)n Simple_repeat Simple_repeat 2 53 0 235 200 15 15 chr20 24122105 24122170 -42545835 + (TA)n Simple_repeat Simple_repeat 1 65 0 788 180 25 0 chr20 24122252 24122374 -42545631 - FLAM_A SINE Alu -8 125 1 220 217 43 0 chr20 24122441 24122487 -42545518 - MER5A DNA MER1_type -95 94 47 372 333 23 0 chr20 24122580 24122712 -42545293 + MIR SINE MIR 58 192 -70 538 240 73 22 chr20 24123045 24123224 -42544781 - LTR16A1 LTR ERVL -1 456 269 206 267 93 35 chr20 24123643 24123729 -42544276 - MIR SINE MIR -108 154 64 387 251 216 0 chr20 24123746 24123849 -42544156 - MIR SINE MIR -24 238 158 186 71 0 0 chr20 24123849 24123877 -42544128 + (TAA)n Simple_repeat Simple_repeat 3 30 0 387 251 216 0 chr20 24123877 24123940 -42544065 - MIR SINE MIR -104 158 36 259 372 16 23 chr20 24124169 24124298 -42543707 - L2 LINE L2 0 3272 3145 238 196 71 0 chr20 24125065 24125121 -42542884 + MER94 DNA DNA 20 79 -55 21 0 0 0 chr20 24125587 24125608 -42542397 + AT_rich Low_complexity Low_complexity 1 21 0 2131 120 3 10 chr20 24126191 24126490 -42541515 + AluSx SINE Alu 1 297 -15 556 295 67 13 chr20 24126610 24126834 -42541171 + MIR SINE MIR 3 238 -24 279 0 0 0 chr20 24126835 24126866 -42541139 + (TA)n Simple_repeat Simple_repeat 2 32 0 483 219 9 0 chr20 24126881 24126995 -42541010 - L1MC4 LINE L1 -1 8041 7927 1575 248 55 43 chr20 24127002 24127605 -42540400 - MLT1E3 LTR MaLR -5 619 9 1955 221 48 76 chr20 24127606 24127844 -42540161 - L1MC4 LINE L1 -131 7911 7668 1074 144 0 0 chr20 24127844 24128024 -42539981 + (TA)n Simple_repeat Simple_repeat 1 180 0 1955 221 48 76 chr20 24128024 24128391 -42539614 - L1MC4 LINE L1 -374 7668 7323 644 274 90 38 chr20 24128721 24129009 -42538996 + L2 LINE L2 1777 2079 -1235 1101 247 67 19 chr20 24129019 24129335 -42538670 - MLT1H LTR MaLR -215 334 4 310 286 42 0 chr20 24130427 24130546 -42537459 + L1MC4a LINE L1 5885 6008 -1800 312 27 0 0 chr20 24130975 24131012 -42536993 + (TC)n Simple_repeat Simple_repeat 2 38 0 506 185 37 0 chr20 24131460 24131568 -42536437 - MER103 DNA DNA -45 121 10 1990 184 6 3 chr20 24131995 24132332 -42535673 + MER7A DNA MER2_type 3 338 -8 231 36 0 0 chr20 24133151 24133179 -42534826 + (TG)n Simple_repeat Simple_repeat 2 29 0 183 42 0 0 chr20 24133473 24133497 -42534508 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 189 0 0 0 chr20 24134393 24134414 -42533591 + (TTCA)n Simple_repeat Simple_repeat 2 22 0 188 65 0 32 chr20 24137021 24137052 -42530953 + (GAAA)n Simple_repeat Simple_repeat 1 30 0 1955 151 0 10 chr20 24137829 24138127 -42529878 + AluJb SINE Alu 1 295 -17 1819 185 9 6 chr20 24138213 24138553 -42529452 + L1MA9 LINE L1 5442 5782 -530 696 118 0 0 chr20 24138554 24138647 -42529358 - AluSc SINE Alu -215 94 2 1928 255 13 4 chr20 24138649 24139124 -42528881 + L1MA9 LINE L1 5796 6274 -38 398 204 68 54 chr20 24141306 24141453 -42526552 + L1ME4a LINE L1 5812 5960 -161 24 32 0 0 chr20 24141958 24141989 -42526016 + AT_rich Low_complexity Low_complexity 1 31 0 370 214 155 0 chr20 24144018 24144121 -42523884 - L2 LINE L2 -1 3271 3153 299 276 166 31 chr20 24144260 24144423 -42523582 - MIR3 SINE MIR -9 199 15 263 53 0 0 chr20 24144544 24144582 -42523423 - L1PA6 LINE L1 -4 6150 6113 336 261 104 71 chr20 24145283 24145518 -42522487 + L1ME LINE L1 4732 4979 -1167 263 240 0 66 chr20 24145763 24145884 -42522121 + L1ME LINE L1 5254 5366 -2442 311 311 87 37 chr20 24146056 24146355 -42521650 + L1ME LINE L1 5496 5809 -312 180 326 132 44 chr20 24147447 24147674 -42520331 + L2 LINE L2 1705 1951 -1363 203 307 86 14 chr20 24147753 24147893 -42520112 + L2 LINE L2 2123 2272 -1042 403 341 0 33 chr20 24148082 24148264 -42519741 - MER91B DNA MER1_type -14 176 1 214 356 0 0 chr20 24148348 24148407 -42519598 - L3 LINE CR1 -86 1491 1433 567 321 58 33 chr20 24148522 24148762 -42519243 + MIR SINE MIR 2 247 -15 217 359 107 39 chr20 24148800 24149184 -42518821 - L3 LINE CR1 -381 1196 787 191 311 194 29 chr20 24149342 24149445 -42518560 + L2 LINE L2 3104 3223 -49 1882 165 81 43 chr20 24149672 24150114 -42517891 - L1MB7 LINE L1 -9 6175 5717 23 54 0 0 chr20 24150897 24150934 -42517071 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr20 24151043 24151065 -42516940 + AT_rich Low_complexity Low_complexity 1 22 0 200 114 0 29 chr20 24153287 24153322 -42514683 + (GAAAA)n Simple_repeat Simple_repeat 4 37 0 1918 108 12 0 chr20 24155112 24155403 -42512602 - AluSx SINE Alu 0 314 21 600 235 231 8 chr20 24155788 24156043 -42511962 + MER46C DNA MER2_type 11 322 -16 294 320 0 0 chr20 24156328 24156450 -42511555 + L1MC4 LINE L1 7918 8039 -3 438 306 9 0 chr20 24156724 24156835 -42511170 + MIR SINE MIR 82 193 -69 499 252 14 14 chr20 24156913 24157052 -42510953 - MIR SINE MIR -25 237 99 429 225 11 0 chr20 24157324 24157413 -42510592 - Tigger7 DNA MER2_type 0 2587 2498 1459 218 4 0 chr20 24157414 24157671 -42510334 - Tigger7 DNA MER2_type -2228 259 2 281 128 43 0 chr20 24157676 24157723 -42510282 + MER63C DNA MER1_type 11 59 -871 4468 162 56 8 chr20 24157742 24158801 -42509204 + L1MA9 LINE L1 5039 6172 -119 204 40 0 0 chr20 24158801 24158826 -42509179 + (CA)n Simple_repeat Simple_repeat 2 26 0 4468 162 56 8 chr20 24158826 24158948 -42509057 + L1MA9 LINE L1 6172 6287 -4 465 185 11 0 chr20 24158953 24159045 -42508960 + MER63C DNA MER1_type 140 232 -698 2126 127 0 29 chr20 24159055 24159371 -42508634 - AluSx SINE Alu -5 307 1 289 294 34 34 chr20 24159394 24159540 -42508465 - MER63C DNA MER1_type -541 389 244 * 2106 217 26 12 chr20 24159425 24159849 -42508156 + MER63C DNA MER1_type 246 675 -255 322 314 25 8 chr20 24160372 24160493 -42507512 + L2 LINE L2 3149 3271 -1 1078 249 73 18 chr20 24161633 24162015 -42505990 - L1ME3A LINE L1 -9 6161 5759 1686 260 43 9 chr20 24164523 24164985 -42503020 - MER110 LTR ERV1 0 491 14 2174 177 52 55 chr20 24165091 24165510 -42502495 + MER47B DNA MER2_type 1 418 0 2364 138 44 20 chr20 24166829 24167073 -42500932 - MSTA LTR MaLR 0 428 169 2132 110 0 7 chr20 24167073 24167385 -42500620 + AluSq SINE Alu 1 313 0 2364 138 44 20 chr20 24167385 24167546 -42500459 - MSTA LTR MaLR -259 169 13 2214 171 16 25 chr20 24167765 24168204 -42499801 + L1MC3 LINE L1 6673 7107 -678 240 313 0 0 chr20 24168204 24168271 -42499734 + MLT1F1 LTR MaLR 45 111 -456 583 179 36 0 chr20 24168271 24168383 -42499622 + L1MC3 LINE L1 7175 7290 -495 1933 159 28 0 chr20 24168400 24168721 -42499284 + MER46B DNA MER2_type 32 236 0 2902 143 31 4 chr20 24168721 24169204 -42498801 + L1MC3 LINE L1 7289 7784 -1 1831 257 74 4 chr20 24169281 24169740 -42498265 + MER110 LTR ERV1 1 491 0 511 359 49 11 chr20 24170667 24171035 -42496970 + LTR16B LTR ERVL 76 457 -7 407 244 173 19 chr20 24171357 24171513 -42496492 + LTR33 LTR ERVL 42 221 -300 250 286 10 0 chr20 24171563 24171661 -42496344 + LTR33 LTR ERVL 308 406 -115 21 0 0 0 chr20 24171839 24171860 -42496145 + AT_rich Low_complexity Low_complexity 1 21 0 225 240 0 0 chr20 24172359 24172434 -42495571 + (CA)n Simple_repeat Simple_repeat 2 76 0 309 344 85 68 chr20 24173155 24173579 -42494426 + L2 LINE L2 2842 3272 0 356 317 6 18 chr20 24173832 24173999 -42494006 + (CATA)n Simple_repeat Simple_repeat 3 167 0 21 0 0 0 chr20 24174082 24174103 -42493902 + AT_rich Low_complexity Low_complexity 1 21 0 215 178 0 22 chr20 24174607 24174652 -42493353 + (TA)n Simple_repeat Simple_repeat 2 45 0 198 128 128 21 chr20 24175550 24175597 -42492408 + MIR SINE MIR 21 72 -136 1641 202 25 27 chr20 24176129 24176496 -42491509 + MLT1A2 LTR MaLR 1 366 -8 1766 115 4 4 chr20 24176629 24176873 -42491132 - AluSq SINE Alu -69 244 1 195 246 0 0 chr20 24177169 24177226 -42490779 + (TA)n Simple_repeat Simple_repeat 1 57 0 731 254 141 71 chr20 24177295 24177729 -42490276 - MLT1F1 LTR MaLR -8 541 37 649 250 45 35 chr20 24178182 24178518 -42489487 - LTR16A LTR ERVL -30 420 21 406 254 18 27 chr20 24178528 24178638 -42489367 - MER5A DNA MER1_type -42 147 39 26 0 0 0 chr20 24180897 24180923 -42487082 + AT_rich Low_complexity Low_complexity 1 26 0 692 110 0 8 chr20 24180943 24181061 -42486944 + (TCTA)n Simple_repeat Simple_repeat 2 118 0 353 234 137 24 chr20 24182250 24182374 -42485631 - MIR SINE MIR -24 238 101 328 296 119 57 chr20 24182558 24182876 -42485129 + L1MC4a LINE L1 5546 5883 -1925 2444 231 63 27 chr20 24183299 24183921 -42484084 - MER82 DNA MER2_type -1 652 9 244 277 121 7 chr20 24185085 24185226 -42482779 + LTR16A LTR ERVL 106 262 -188 22 35 0 0 chr20 24185788 24185817 -42482188 + AT_rich Low_complexity Low_complexity 1 29 0 1804 175 21 6 chr20 24186635 24186966 -42481039 - L1MA5 LINE L1 0 6300 5965 217 298 0 0 chr20 24186992 24187049 -42480956 + MIR SINE MIR 200 256 -6 604 157 10 0 chr20 24187245 24187347 -42480658 + L1MB2 LINE L1 5736 5838 -345 247 130 37 0 chr20 24187342 24187396 -42480609 + L1MB2 LINE L1 6114 6169 -2 * 234 0 0 0 chr20 24187532 24187558 -42480447 + (A)n Simple_repeat Simple_repeat 1 26 0 240 339 34 51 chr20 24187826 24188003 -42480002 - MIR3 SINE MIR -5 203 30 22 99 0 0 chr20 24188219 24188290 -42479715 + AT_rich Low_complexity Low_complexity 1 71 0 1062 306 50 3 chr20 24188376 24188719 -42479286 + LTR16C LTR ERVL 102 460 -31 189 0 0 0 chr20 24189259 24189280 -42478725 + (TGG)n Simple_repeat Simple_repeat 1 21 0 290 149 0 0 chr20 24189603 24189650 -42478355 - L1MA5 LINE L1 -4 6296 6250 218 405 8 8 chr20 24189861 24189992 -42478013 - L2 LINE L2 -181 3091 2961 518 289 103 92 chr20 24190385 24190402 -42477603 + HAL1 LINE L1 844 859 -1648 2376 69 0 25 chr20 24190402 24190721 -42477284 + AluY SINE Alu 1 311 0 518 289 103 92 chr20 24190721 24191346 -42476659 + HAL1 LINE L1 859 1493 -1014 485 168 154 0 chr20 24191540 24191621 -42476384 - MER33 DNA MER1_type -2261 363 296 1909 129 4 4 chr20 24191621 24191901 -42476104 + AluSx SINE Alu 1 280 -32 413 0 39 0 chr20 24191901 24191953 -42476052 + (TAAAA)n Simple_repeat Simple_repeat 4 57 0 485 168 154 0 chr20 24191953 24192013 -42475992 - MER33 DNA MER1_type -2327 297 199 366 239 0 0 chr20 24192024 24192095 -42475910 - MER33 DNA MER1_type -217 107 37 182 37 37 0 chr20 24192185 24192212 -42475793 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1396 174 8 12 chr20 24192213 24192455 -42475550 - AluJo SINE Alu -71 241 1 330 26 0 0 chr20 24192849 24192888 -42475117 + (CA)n Simple_repeat Simple_repeat 2 40 0 512 257 112 57 chr20 24193191 24193681 -42474324 - L1MC5 LINE L1 -184 7777 7261 235 285 89 28 chr20 24193957 24194136 -42473869 + L1P5 LINE L1 5270 5459 -692 414 293 105 68 chr20 24194166 24194593 -42473412 - L2 LINE L2 0 3313 2871 393 281 194 29 chr20 24194656 24195073 -42472932 - L2 LINE L2 -460 2854 2369 1339 301 31 0 chr20 24198454 24198846 -42469159 + LTR16C LTR ERVL 88 491 0 295 238 36 0 chr20 24199728 24199812 -42468193 - L2 LINE L2 -1 3312 3226 331 343 76 17 chr20 24201145 24201381 -42466624 + L3 LINE CR1 208 457 -1120 222 37 0 0 chr20 24203559 24203586 -42464419 + (CA)n Simple_repeat Simple_repeat 2 28 0 311 290 64 24 chr20 24206804 24206970 -42461035 - LTR16B LTR ERVL -2 450 264 1663 176 7 10 chr20 24207846 24208147 -42459858 + AluJb SINE Alu 1 300 -12 1674 177 23 19 chr20 24208764 24209074 -42458931 + AluJo SINE Alu 1 311 -1 22 0 0 0 chr20 24209114 24209136 -42458869 + AT_rich Low_complexity Low_complexity 1 22 0 347 188 10 89 chr20 24210090 24210191 -42457814 + Charlie7 DNA MER1_type 22 114 -2498 232 228 105 9 chr20 24210164 24210278 -42457727 + Charlie7 DNA MER1_type 2437 2561 -51 * 1839 186 32 18 chr20 24210732 24211071 -42456934 - MER2 DNA MER2_type 0 344 1 200 188 0 0 chr20 24412727 24412759 -42255246 + polypurine Low_complexity Low_complexity 5 36 0 319 290 11 0 chr20 24413164 24413257 -42254748 - MER117 DNA MER1_type -53 144 51 483 273 102 57 chr20 24413594 24413928 -42254077 + LTR16A1 LTR ERVL 98 423 -34 247 316 13 0 chr20 24414652 24414728 -42253277 - MARNA DNA Mariner -42 544 468 1850 204 31 60 chr20 24415778 24416298 -42251707 - MLT1D LTR MaLR 0 505 1 13426 141 13 4 chr20 24416363 24418576 -42249429 + L1PA11 LINE L1 2706 4938 -1208 6304 87 22 15 chr20 24418577 24419525 -42248480 + L1PA11 LINE L1 5217 6170 -4 493 215 57 96 chr20 24420087 24420296 -42247709 - LTR16A1 LTR ERVL -13 444 244 390 57 0 0 chr20 24420912 24420965 -42247040 + (CA)n Simple_repeat Simple_repeat 2 54 0 294 239 76 43 chr20 24421510 24421602 -42246403 - MLT1J LTR MaLR 0 511 417 455 307 36 26 chr20 24421749 24421941 -42246064 - MLT1J LTR MaLR -317 194 1 663 266 82 30 chr20 24422183 24422488 -42245517 + LTR16A LTR ERVL 117 437 -13 258 223 147 58 chr20 24422709 24422872 -42245133 + MIR SINE MIR 6 201 -61 628 229 42 57 chr20 24423323 24423515 -42244490 + MER5A DNA MER1_type 1 189 0 253 286 14 0 chr20 24423585 24423655 -42244350 + CT-rich Low_complexity Low_complexity 2 72 0 2198 127 0 0 chr20 24424280 24424587 -42243418 + AluSx SINE Alu 1 307 -5 3571 206 83 19 chr20 24425379 24426241 -42241764 - L1MD1 LINE L1 -20 6222 5305 737 139 33 0 chr20 24426245 24426367 -42241638 - AluSg/x SINE Alu -18 294 169 7965 258 27 9 chr20 24426367 24428893 -42239112 - L1MD1 LINE L1 -864 5282 2713 273 215 63 0 chr20 24428910 24428989 -42239016 - L1 LINE L1 -2874 3272 3189 222 37 0 0 chr20 24429095 24429122 -42238883 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2084 100 0 0 chr20 24431323 24431593 -42236412 - AluSg SINE Alu -3 307 38 2015 141 12 3 chr20 24432740 24433073 -42234932 + L1MA3 LINE L1 5970 6305 0 841 272 77 17 chr20 24433461 24433759 -42234246 - LTR16C LTR ERVL -30 461 146 490 284 25 0 chr20 24434408 24434570 -42233435 + MER5A DNA MER1_type 18 183 -6 25 0 0 0 chr20 24434752 24434777 -42233228 + AT_rich Low_complexity Low_complexity 1 25 0 439 270 37 2 chr20 24435325 24435568 -42232437 - LTR16A LTR ERVL 0 450 158 1402 230 36 45 chr20 24436030 24436477 -42231528 + L1ME2 LINE L1 5712 6154 -10 274 287 97 10 chr20 24436511 24436706 -42231299 + L1MC4 LINE L1 7827 8038 -4 2236 196 25 12 chr20 24437612 24438091 -42229914 - L1P LINE L1 -1214 4932 4448 3308 143 14 18 chr20 24438091 24438661 -42229344 + L1PA16 LINE L1 5595 6165 -1 386 278 90 0 chr20 24438851 24438984 -42229021 - MIR SINE MIR -13 249 105 207 268 49 0 chr20 24439061 24439143 -42228862 + MIR SINE MIR 107 192 -70 281 253 13 12 chr20 24440840 24440932 -42227073 + MIR SINE MIR 22 105 -103 805 275 92 35 chr20 24441420 24441930 -42226075 + MLT2E LTR ERVL 1 605 -23 511 183 21 0 chr20 24443463 24443556 -42224449 - MER3 DNA MER1_type -100 109 15 1172 28 7 0 chr20 24445083 24445227 -42222778 + (TTTC)n Simple_repeat Simple_repeat 2 146 0 2399 39 0 11 chr20 24445229 24445511 -42222494 - AluY SINE Alu -32 279 1 22 0 0 0 chr20 24445570 24445592 -42222413 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr20 24445713 24445742 -42222263 + AT_rich Low_complexity Low_complexity 1 29 0 22 70 0 0 chr20 24446198 24446241 -42221764 + AT_rich Low_complexity Low_complexity 1 43 0 198 254 141 0 chr20 24446246 24446317 -42221688 - MIR3 SINE MIR -23 185 105 1818 162 27 0 chr20 24446452 24446748 -42221257 + AluJo SINE Alu 1 304 -8 27 29 0 0 chr20 24446824 24446858 -42221147 + AT_rich Low_complexity Low_complexity 1 34 0 192 264 56 0 chr20 24448198 24448270 -42219735 - L2 LINE L2 0 3313 3238 567 205 96 6 chr20 24448535 24448691 -42219314 - MER5B DNA MER1_type -6 172 3 1346 211 48 56 chr20 24449324 24449706 -42218299 + L1M4 LINE L1 5414 5794 -370 2471 46 0 0 chr20 24450530 24450832 -42217173 + AluY SINE Alu 1 302 0 252 143 0 0 chr20 24451067 24451109 -42216896 + (TG)n Simple_repeat Simple_repeat 2 43 0 600 144 162 9 chr20 24451122 24451233 -42216772 - FLAM_C SINE Alu -14 129 2 1024 114 0 10 chr20 24452707 24452912 -42215093 + (TC)n Simple_repeat Simple_repeat 1 202 0 442 291 71 71 chr20 24453537 24453919 -42214086 - L1M4 LINE L1 -2988 3158 2777 1639 162 92 0 chr20 24454015 24454373 -42213632 - Charlie5 DNA MER1_type 0 2624 2234 580 110 92 9 chr20 24454374 24454483 -42213522 - Charlie5 DNA MER1_type -2488 124 7 1769 210 3 0 chr20 24455588 24455926 -42212079 + L1PB4 LINE L1 5818 6156 0 208 147 0 0 chr20 24455936 24455970 -42212035 + (A)n Simple_repeat Simple_repeat 1 34 0 1973 154 3 3 chr20 24455980 24456292 -42211713 - AluSx SINE Alu 0 312 1 890 189 98 7 chr20 24457185 24457457 -42210548 + MER33 DNA MER1_type 1 262 -62 2165 121 0 0 chr20 24457611 24457900 -42210105 - AluSx SINE Alu -23 289 1 724 272 123 33 chr20 24458089 24458481 -42209524 - L2 LINE L2 -144 3169 2814 2082 97 7 4 chr20 24458481 24458782 -42209223 + AluSc SINE Alu 1 302 0 724 272 123 33 chr20 24458782 24459019 -42208986 - L2 LINE L2 -499 2814 2423 293 371 52 31 chr20 24459377 24459859 -42208146 - L2 LINE L2 -442 2872 2381 421 306 127 4 chr20 24459886 24460115 -42207890 - LTR16C LTR ERVL 0 491 235 2214 106 3 0 chr20 24460644 24460955 -42207050 - AluSq SINE Alu 0 312 1 2319 111 0 13 chr20 24460980 24461296 -42206709 + AluSq SINE Alu 1 312 -1 1470 141 137 22 chr20 24461362 24461632 -42206373 + AluJo SINE Alu 1 301 -1 1970 123 0 0 chr20 24461692 24461961 -42206044 - AluSx SINE Alu -43 269 1 205 345 52 10 chr20 24462246 24462373 -42205632 + MIR SINE MIR 32 137 -71 293 249 182 42 chr20 24463843 24464008 -42203997 + MIR SINE MIR 28 215 -47 26 0 0 0 chr20 24464648 24464674 -42203331 + AT_rich Low_complexity Low_complexity 1 26 0 1904 177 0 13 chr20 24465034 24465350 -42202655 + AluJb SINE Alu 1 312 0 1577 185 31 3 chr20 24465927 24466219 -42201786 + AluJo SINE Alu 1 300 -12 333 159 0 16 chr20 24466219 24466282 -42201723 + GA-rich Low_complexity Low_complexity 1 62 0 490 126 11 11 chr20 24466282 24466377 -42201628 + (GGAA)n Simple_repeat Simple_repeat 3 97 0 2082 120 14 0 chr20 24467002 24467278 -42200727 + AluSx SINE Alu 1 280 -32 435 38 0 0 chr20 24467278 24467331 -42200674 + (GAAAA)n Simple_repeat Simple_repeat 3 55 0 195 295 29 48 chr20 24467464 24467569 -42200436 + MIR SINE MIR 62 164 -98 2334 91 0 22 chr20 24467877 24468195 -42199810 - AluY SINE Alu 0 311 1 524 260 0 26 chr20 24469757 24469911 -42198094 - MIR SINE MIR -5 257 108 21 0 0 0 chr20 24471336 24471357 -42196648 + AT_rich Low_complexity Low_complexity 1 21 0 303 182 23 11 chr20 24471382 24471470 -42196535 + GA-rich Low_complexity Low_complexity 2 90 0 337 279 90 0 chr20 24471771 24471882 -42196123 + MER103 DNA DNA 45 165 -1 261 203 31 36 chr20 24472147 24472233 -42195772 + MIR SINE MIR 33 116 -92 1236 253 172 33 chr20 24472275 24472793 -42195212 - MLT1E LTR MaLR -3 590 1 538 271 144 6 chr20 24473134 24473315 -42194690 - MIR SINE MIR -41 221 16 260 364 29 0 chr20 24474801 24474941 -42193064 + MIR SINE MIR 46 189 -73 302 197 15 15 chr20 24475564 24475630 -42192375 + MIR SINE MIR 77 142 -66 519 237 79 20 chr20 24476118 24476270 -42191735 - MIR SINE MIR -15 247 87 387 343 129 11 chr20 24476325 24476970 -42191035 + L2 LINE L2 2175 2895 -419 189 296 86 0 chr20 24477033 24477114 -42190891 - MIR SINE MIR -71 191 104 427 350 13 30 chr20 24477713 24477947 -42190058 - MIR SINE MIR -6 256 27 1472 174 87 10 chr20 24477962 24478250 -42189755 - AluJo SINE Alu -2 310 1 1440 47 3 3 chr20 24478375 24478671 -42189334 + (TTC)n Simple_repeat Simple_repeat 1 296 0 2863 210 108 31 chr20 24478953 24480109 -42187896 + L1ME1 LINE L1 4934 6163 -3 1219 259 100 24 chr20 24480944 24481442 -42186563 + L1MC4 LINE L1 7366 7901 -141 6211 118 4 0 chr20 24481922 24482904 -42185101 - L1PA15 LINE L1 -6 6159 5174 393 248 128 17 chr20 24483137 24483254 -42184751 - MLT1J2 LTR MaLR -34 416 287 597 273 94 49 chr20 24483377 24483426 -42184579 + MLT1G1 LTR MaLR 48 93 -502 1764 178 0 3 chr20 24483426 24483737 -42184268 + AluJb SINE Alu 1 310 0 597 273 94 49 chr20 24483737 24484119 -42183886 + MLT1G1 LTR MaLR 93 595 0 780 303 115 10 chr20 24484251 24484692 -42183313 - LTR33 LTR ERVL 0 521 20 858 184 0 0 chr20 24484712 24484891 -42183114 + (CAT)n Simple_repeat Simple_repeat 1 179 0 2212 120 0 7 chr20 24485335 24485634 -42182371 + AluSq SINE Alu 1 297 -16 199 366 73 26 chr20 24485653 24485844 -42182161 - L2 LINE L2 -405 2909 2710 250 325 0 0 chr20 24486101 24486181 -42181824 - L2 LINE L2 -13 3300 3221 201 260 13 39 chr20 24486247 24486324 -42181681 + L2 LINE L2 2936 3010 -262 240 317 50 68 chr20 24486770 24486991 -42181014 + MIR SINE MIR 23 239 -23 600 228 111 11 chr20 24487274 24487463 -42180542 - L2 LINE L2 0 3313 3106 27 0 0 0 chr20 24487722 24487749 -42180256 + AT_rich Low_complexity Low_complexity 1 27 0 1936 130 103 30 chr20 24488051 24488390 -42179615 - THE1B LTR MaLR 0 364 1 11814 88 5 45 chr20 24488390 24490036 -42177969 - THE1B-int LTR MaLR 0 1580 1 1904 148 111 15 chr20 24490036 24490368 -42177637 - THE1B LTR MaLR 0 364 1 355 272 73 22 chr20 24490713 24490849 -42177156 + MIR SINE MIR 118 260 -2 228 86 0 0 chr20 24491280 24491315 -42176690 + (CA)n Simple_repeat Simple_repeat 2 36 0 26 50 0 0 chr20 24491381 24491421 -42176584 + AT_rich Low_complexity Low_complexity 1 40 0 379 294 50 6 chr20 24491470 24491650 -42176355 - MIR SINE MIR 0 262 75 1191 183 0 0 chr20 24491809 24492011 -42175994 + AluJb SINE Alu 87 288 -24 398 228 25 0 chr20 24492356 24492435 -42175570 - AluJo SINE Alu -1 301 221 521 171 63 18 chr20 24492435 24492546 -42175459 - AluJo SINE Alu -124 188 73 1150 227 68 64 chr20 24493408 24493603 -42174402 - L1MC5 LINE L1 -66 7895 7702 2019 108 0 0 chr20 24493603 24493862 -42174143 + AluSc SINE Alu 38 296 -13 1150 227 68 64 chr20 24493862 24494257 -42173748 - L1MC5 LINE L1 -259 7702 7303 898 207 6 6 chr20 24494647 24494826 -42173179 + AluJo SINE Alu 118 296 -16 267 31 0 0 chr20 24497086 24497118 -42170887 + (TG)n Simple_repeat Simple_repeat 1 32 0 183 162 0 0 chr20 24500300 24500337 -42167668 + (CA)n Simple_repeat Simple_repeat 2 38 0 500 0 0 16 chr20 24501512 24501573 -42166432 + (GAAA)n Simple_repeat Simple_repeat 3 62 0 200 114 0 29 chr20 24506376 24506411 -42161594 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 30 27 0 0 chr20 24510339 24510376 -42157629 + AT_rich Low_complexity Low_complexity 1 37 0 349 20 20 20 chr20 24511119 24511170 -42156835 + (TG)n Simple_repeat Simple_repeat 1 51 0 230 215 0 62 chr20 24512999 24513064 -42154941 + MIR SINE MIR 79 139 -123 25 31 0 0 chr20 24518109 24518141 -42149864 + GC_rich Low_complexity Low_complexity 1 32 0 188 139 56 0 chr20 24520681 24520717 -42147288 + L2 LINE L2 1971 2008 -1306 21 0 0 0 chr20 24521054 24521075 -42146930 + AT_rich Low_complexity Low_complexity 1 21 0 180 77 0 0 chr20 24521634 24521660 -42146345 + (TGG)n Simple_repeat Simple_repeat 1 26 0 251 266 0 0 chr20 24523962 24524026 -42143979 + CT-rich Low_complexity Low_complexity 6 69 0 569 58 0 11 chr20 24524227 24524314 -42143691 + (GGA)n Simple_repeat Simple_repeat 1 86 0 195 42 0 0 chr20 24526122 24526146 -42141859 + (CA)n Simple_repeat Simple_repeat 2 25 0 2280 112 3 0 chr20 24527751 24528055 -42139950 + AluSq SINE Alu 1 305 -8 255 143 0 0 chr20 24529692 24529734 -42138271 - L2 LINE L2 -4 3309 3268 453 220 213 35 chr20 24530399 24530540 -42137465 - MER5A DNA MER1_type -8 181 16 22 35 0 0 chr20 24530960 24530989 -42137016 + AT_rich Low_complexity Low_complexity 1 29 0 274 242 0 16 chr20 24532766 24532828 -42135177 + (TG)n Simple_repeat Simple_repeat 1 61 0 243 170 0 0 chr20 24534191 24534238 -42133767 + (TGGA)n Simple_repeat Simple_repeat 1 47 0 592 267 121 0 chr20 24534334 24534566 -42133439 - MER112 DNA MER1_type 0 260 1 436 277 15 22 chr20 24534610 24534747 -42133258 + MIR SINE MIR 117 252 -10 401 250 9 18 chr20 24536020 24536132 -42131873 - LTR16A1 LTR ERVL 0 457 347 757 304 70 11 chr20 24537106 24537464 -42130541 + LTR16A LTR ERVL 64 442 -8 1577 257 44 2 chr20 24537688 24538096 -42129909 - LTR16C LTR ERVL 0 491 67 2075 84 0 4 chr20 24538395 24538657 -42129348 + AluY SINE Alu 1 261 -50 1883 153 7 27 chr20 24538878 24539034 -42128971 - AluSx SINE Alu -17 295 137 369 0 0 0 chr20 24539034 24539075 -42128930 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 2203 112 0 20 chr20 24539076 24539371 -42128634 - AluSp SINE Alu -24 289 1 1883 153 7 27 chr20 24539371 24539513 -42128492 - AluSx SINE Alu -174 138 1 34 0 0 0 chr20 24539518 24539552 -42128453 + AT_rich Low_complexity Low_complexity 1 34 0 529 316 53 27 chr20 24541360 24541585 -42126420 + MIR SINE MIR 6 236 -26 216 0 0 0 chr20 24542034 24542058 -42125947 + (T)n Simple_repeat Simple_repeat 1 24 0 278 361 27 10 chr20 24542122 24542248 -42125757 + MIR SINE MIR 20 145 -84 243 206 7 184 chr20 24542598 24542739 -42125266 + MER5B DNA MER1_type 38 153 -25 * 457 202 9 73 chr20 24542661 24542770 -42125235 - MER5A DNA MER1_type -83 106 5 1919 136 122 20 chr20 24544202 24544556 -42123449 + MLT1B LTR MaLR 1 390 0 191 320 131 63 chr20 24544858 24545208 -42122797 - L2 LINE L2 -341 2973 2600 1533 217 0 16 chr20 24548325 24548639 -42119366 - AluJo SINE Alu -3 309 1 646 294 174 9 chr20 24548730 24549149 -42118856 + L1MC4a LINE L1 5416 5903 -1905 25 51 0 0 chr20 24549317 24549356 -42118649 + AT_rich Low_complexity Low_complexity 1 39 0 1986 164 0 0 chr20 24549361 24549665 -42118340 - AluSx SINE Alu -8 304 1 1819 210 106 46 chr20 24549981 24550529 -42117476 - MLT1E LTR MaLR -1 592 12 341 317 69 14 chr20 24551099 24551244 -42116761 + L2 LINE L2 3159 3311 -2 244 333 16 13 chr20 24552739 24552865 -42115140 + MIR SINE MIR 51 176 -32 568 308 99 56 chr20 24553194 24553607 -42114398 + L2 LINE L2 2344 2774 -540 290 291 48 0 chr20 24553850 24553953 -42114052 - MLT1L LTR MaLR -2 613 506 993 247 21 29 chr20 24554474 24554753 -42113252 + L1MC4a LINE L1 7532 7808 0 336 252 63 18 chr20 24555018 24555129 -42112876 + HAL1b LINE L1 857 972 -376 941 211 23 0 chr20 24555135 24555310 -42112695 - FAM SINE Alu -1 48 1 1618 200 10 7 chr20 24555326 24555626 -42112379 - AluJb SINE Alu -11 301 1 369 274 40 97 chr20 24555629 24556053 -42111952 + HAL1b LINE L1 947 1346 -2 475 256 78 33 chr20 24557195 24557465 -42110540 - MER97c DNA MER1_type? -1 1089 808 1246 232 132 44 chr20 24557494 24557972 -42110033 - MER97a DNA MER1_type? -324 570 51 180 77 0 0 chr20 24559384 24559410 -42108595 + (TG)n Simple_repeat Simple_repeat 2 27 0 393 366 59 42 chr20 24559448 24559735 -42108270 + L3b LINE CR1 1292 1583 0 895 197 14 0 chr20 24561236 24561383 -42106622 + FAM SINE Alu 1 149 -36 186 43 0 0 chr20 24561390 24561413 -42106592 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 311 280 42 85 chr20 24561550 24561739 -42106266 - MLT1J LTR MaLR -330 181 1 183 129 0 0 chr20 24562387 24562418 -42105587 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 769 253 111 58 chr20 24562448 24562863 -42105142 - LTR16A LTR ERVL -1 449 13 516 255 139 53 chr20 24562985 24563322 -42104683 - MLT1J LTR MaLR -145 366 1 506 283 14 0 chr20 24563518 24563663 -42104342 - MER5B DNA MER1_type -20 158 12 1862 173 0 3 chr20 24563690 24564003 -42104002 + AluJo SINE Alu 1 312 0 309 68 0 0 chr20 24564047 24564091 -42103914 + (TG)n Simple_repeat Simple_repeat 2 45 0 443 244 23 68 chr20 24564091 24564267 -42103738 - MLT1K LTR MaLR -27 561 394 806 273 107 57 chr20 24564489 24565124 -42102881 - L1ME3 LINE L1 -91 6079 5336 1601 183 7 18 chr20 24565124 24565409 -42102596 - AluJo SINE Alu -30 282 1 806 273 107 57 chr20 24565409 24565865 -42102140 - L1ME3 LINE L1 -834 5336 4904 1146 220 94 101 chr20 24565931 24566367 -42101638 - MLT1E LTR MaLR 0 593 135 1506 188 21 14 chr20 24566376 24566663 -42101342 + AluJb SINE Alu 23 311 -1 24 0 0 0 chr20 24566769 24566793 -42101212 + AT_rich Low_complexity Low_complexity 1 24 0 277 268 21 21 chr20 24566871 24566968 -42101037 - MLT1E LTR MaLR -557 97 1 181 298 0 0 chr20 24566968 24567025 -42100980 + MIR SINE MIR 159 215 -47 1372 195 29 0 chr20 24567180 24567457 -42100548 + MLT2B1 LTR ERVL 1 285 -235 261 0 0 0 chr20 24569804 24569833 -42098172 + (CA)n Simple_repeat Simple_repeat 2 30 0 2121 133 0 0 chr20 24571839 24572133 -42095872 + AluSg SINE Alu 1 294 -16 268 283 9 38 chr20 24572166 24572272 -42095733 + MER103 DNA DNA 2 104 -62 420 210 38 57 chr20 24573436 24573593 -42094412 - LTR16A1 LTR ERVL 0 457 304 617 274 145 20 chr20 24573601 24573856 -42094149 - L2 LINE L2 -188 3125 2839 218 286 133 0 chr20 24573927 24574032 -42093973 + MIR3 SINE MIR 84 202 -6 1387 205 165 9 chr20 24574377 24574388 -42093617 - L1M4 LINE L1 -748 5398 5390 2408 193 44 10 chr20 24574388 24574886 -42093119 - L1MB7 LINE L1 -15 6667 6153 1387 205 165 9 chr20 24574886 24575298 -42092707 - L1M4 LINE L1 -756 5390 4909 29 0 0 0 chr20 24575312 24575341 -42092664 + AT_rich Low_complexity Low_complexity 1 29 0 660 200 70 19 chr20 24576399 24576614 -42091391 - L1MB7 LINE L1 -1676 4968 4743 * 2559 243 78 68 chr20 24576605 24577790 -42090215 - L1MB7 LINE L1 -3462 3182 1851 2247 122 3 0 chr20 24577790 24578101 -42089904 - AluSx SINE Alu 0 312 1 2559 243 78 68 chr20 24578101 24578791 -42089214 - L1MB7 LINE L1 -4793 1851 1169 2819 251 61 27 chr20 24578801 24579607 -42088398 - L1MB7 LINE L1 -5705 837 5 21 57 0 0 chr20 24580511 24580546 -42087459 + AT_rich Low_complexity Low_complexity 1 35 0 1068 295 65 25 chr20 24581194 24581762 -42086243 + L2 LINE L2 2729 3313 0 423 282 176 54 chr20 24582082 24582469 -42085536 + L2 LINE L2 2880 3313 0 2142 130 81 29 chr20 24583107 24583453 -42084552 - THE1B LTR MaLR 0 364 1 12351 102 4 6 chr20 24583453 24585036 -42082969 - THE1B-int LTR MaLR 0 1580 1 2174 114 79 26 chr20 24585038 24585380 -42082625 - THE1B LTR MaLR -2 362 3 801 311 42 9 chr20 24586086 24586514 -42081491 - L1M4 LINE L1 -2539 3607 3166 651 237 0 22 chr20 24586852 24586987 -42081018 - FLAM_C SINE Alu -1 132 1 243 61 0 0 chr20 24587610 24587643 -42080362 + (CA)n Simple_repeat Simple_repeat 2 34 0 2943 124 26 0 chr20 24587705 24588059 -42079946 - L1PB1 LINE L1 -4 6147 5779 492 18 0 0 chr20 24588059 24588116 -42079889 + (TA)n Simple_repeat Simple_repeat 1 57 0 2943 124 26 0 chr20 24588116 24588188 -42079817 - L1PB1 LINE L1 -372 5779 5710 2152 224 4 16 chr20 24588189 24588698 -42079307 + L1P LINE L1 4852 5354 -792 745 291 149 7 chr20 24588788 24589218 -42078787 - LTR16C LTR ERVL 0 491 1 5759 143 6 14 chr20 24589461 24591083 -42076922 - L1PA15 LINE L1 -1 6164 4542 860 276 105 84 chr20 24591174 24591747 -42076258 - MLT1G LTR MaLR 0 590 11 188 250 106 48 chr20 24591888 24591992 -42076013 + L2 LINE L2 3163 3272 0 181 250 19 39 chr20 24592558 24592610 -42075395 + L2 LINE L2 344 394 -2920 291 267 0 0 chr20 24593787 24593922 -42074083 + (CA)n Simple_repeat Simple_repeat 1 135 0 480 235 0 0 chr20 24593947 24594109 -42073896 + (CA)n Simple_repeat Simple_repeat 1 162 0 532 331 0 0 chr20 24594127 24594305 -42073700 + (CA)n Simple_repeat Simple_repeat 1 178 0 291 210 34 17 chr20 24594316 24594435 -42073570 + (CATATA)n Simple_repeat Simple_repeat 2 122 0 379 343 6 0 chr20 24594435 24594607 -42073398 + (CA)n Simple_repeat Simple_repeat 2 174 0 252 367 0 0 chr20 24594642 24594811 -42073194 + (CA)n Simple_repeat Simple_repeat 2 170 0 24 53 0 0 chr20 24595439 24595477 -42072528 + AT_rich Low_complexity Low_complexity 1 38 0 2790 149 24 20 chr20 24595742 24596246 -42071759 - L1MB3 LINE L1 -2 6181 5676 198 146 49 0 chr20 24596363 24596404 -42071601 - MER5B DNA MER1_type -134 44 2 1736 99 11 27 chr20 24596503 24596766 -42071239 - L1MA5 LINE L1 -336 5964 5706 284 235 26 0 chr20 24597542 24597626 -42070379 - MIR SINE MIR -68 140 60 189 248 60 68 chr20 24597626 24597656 -42070349 + L2 LINE L2 1390 1502 -1812 410 204 50 52 chr20 24598568 24598752 -42069253 - HsTC2 DNA Tc2 -2 1896 4 2219 116 3 0 chr20 24600205 24600516 -42067489 + AluSx SINE Alu 1 312 0 574 169 0 0 chr20 24600526 24600609 -42067396 + AluS SINE Alu 2 84 -228 2220 126 0 0 chr20 24600757 24601059 -42066946 - AluSq SINE Alu -11 302 1 22 35 0 0 chr20 24601523 24601552 -42066453 + AT_rich Low_complexity Low_complexity 1 29 0 316 192 50 10 chr20 24601725 24601824 -42066181 - L1MA4A LINE L1 -1 6302 6200 207 0 0 0 chr20 24601824 24601847 -42066158 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 225 0 0 0 chr20 24601846 24601871 -42066134 + (TA)n Simple_repeat Simple_repeat 2 26 0 2065 131 7 7 chr20 24601871 24602168 -42065837 - AluSx SINE Alu -15 297 1 895 234 21 4 chr20 24602168 24602407 -42065598 - L1MA4A LINE L1 -182 6121 5879 814 230 65 30 chr20 24604367 24604567 -42063438 - MSTD LTR MaLR -2 394 188 841 214 0 0 chr20 24604567 24604721 -42063284 - FRAM SINE Alu -21 155 2 683 237 54 21 chr20 24604722 24604908 -42063097 - MSTD LTR MaLR -204 192 1 6008 228 70 67 chr20 24604908 24606451 -42061554 - MSTD-int LTR MaLR 0 1735 184 2169 76 0 0 chr20 24606451 24606713 -42061292 + AluY SINE Alu 1 262 -49 6008 228 70 67 chr20 24606713 24606896 -42061109 - MSTD-int LTR MaLR -1551 184 3 1211 209 78 33 chr20 24606900 24607246 -42060759 - MSTD LTR MaLR -2 394 1 778 227 115 54 chr20 24607691 24607986 -42060019 + MLT1J1 LTR MaLR 64 376 -70 404 254 132 79 chr20 24609057 24609337 -42058668 - MLT1H LTR MaLR -252 297 3 7798 163 9 38 chr20 24609704 24611335 -42056670 + L1M2 LINE L1 3403 4971 -1329 2166 114 0 0 chr20 24611335 24611633 -42056372 + AluSc SINE Alu 6 303 0 7798 163 9 38 chr20 24611633 24612216 -42055789 + L1M2 LINE L1 4971 5569 -731 405 250 103 60 chr20 24612842 24613026 -42054979 - L1ME2 LINE L1 -57 6107 5916 695 160 0 3 chr20 24613415 24613532 -42054473 + L1PA16 LINE L1 5996 6110 -44 483 205 53 116 chr20 24613919 24614000 -42054005 - L1MC5 LINE L1 -205 7756 7671 2321 117 24 46 chr20 24614000 24614297 -42053708 + L1PA16 LINE L1 5761 6048 -118 2768 35 0 0 chr20 24614297 24614608 -42053397 + AluY SINE Alu 1 311 0 2321 117 24 46 chr20 24614608 24614720 -42053285 + L1PA16 LINE L1 6048 6161 -5 483 205 53 116 chr20 24614720 24614941 -42053064 - L1MC5 LINE L1 -290 7671 7473 2456 50 3 0 chr20 24615333 24615630 -42052375 - AluY SINE Alu -12 299 2 184 210 222 0 chr20 24616578 24616659 -42051346 - MIR SINE MIR -6 256 158 2033 194 49 9 chr20 24616724 24617173 -42050832 + MLT1C LTR MaLR 1 467 0 180 280 75 32 chr20 24617282 24617375 -42050630 - MIR SINE MIR -59 149 53 718 299 134 36 chr20 24618441 24618919 -42049086 - MLT1H LTR MaLR 0 549 25 809 203 158 20 chr20 24619287 24619489 -42048516 + MER46A DNA MER2_type 1 230 -6 1368 178 0 4 chr20 24622593 24622818 -42045187 + MER58A DNA MER1_type 1 224 0 278 358 0 0 chr20 24623101 24623210 -42044795 + MIR SINE MIR 104 212 -50 196 264 69 23 chr20 24623262 24623349 -42044656 - MIR3 SINE MIR -24 184 94 198 375 16 0 chr20 24623408 24623536 -42044469 - MIR SINE MIR -8 254 125 864 197 59 25 chr20 24624020 24624223 -42043782 + MER20 DNA MER1_type 10 219 0 517 304 55 37 chr20 24624412 24624685 -42043320 - LTR16C LTR ERVL -2 489 212 961 270 106 27 chr20 24625819 24626226 -42041779 + LTR33A LTR ERVL 57 495 -28 2235 84 45 0 chr20 24626319 24626606 -42041399 - AluY SINE Alu -11 300 1 264 323 31 8 chr20 24626611 24626741 -42041264 + L2 LINE L2 2889 3021 -292 588 256 31 31 chr20 24627484 24627675 -42040330 + LTR16C LTR ERVL 298 488 -3 430 292 70 0 chr20 24628004 24628175 -42039830 + MER5A DNA MER1_type 7 189 0 1881 227 75 50 chr20 24628620 24629157 -42038848 - MER77 LTR ERV1 -15 590 41 334 294 102 47 chr20 24629178 24629433 -42038572 + LTR16C LTR ERVL 223 491 0 391 292 44 9 chr20 24629691 24629804 -42038201 - LTR33A LTR ERVL -341 182 66 1668 84 34 0 chr20 24632184 24632421 -42035584 - L1PA10 LINE L1 -1 6167 5923 3375 89 0 33 chr20 24632440 24632471 -42035534 - MER41A LTR ERV1 -85 469 439 1859 94 25 97 chr20 24632471 24632790 -42035215 + AluSg SINE Alu 1 296 -14 3375 89 0 33 chr20 24632790 24633243 -42034762 - MER41A LTR ERV1 -115 439 1 1106 52 22 0 chr20 24633244 24633378 -42034627 - MER41A-int LTR ERV1 -11 5935 5799 1564 87 5 0 chr20 24633378 24633586 -42034419 - L1PA10 LINE L1 -232 5936 5728 27 49 0 0 chr20 24634060 24634101 -42033904 + AT_rich Low_complexity Low_complexity 1 41 0 754 218 19 66 chr20 24634964 24635175 -42032830 + MER3 DNA MER1_type 1 201 -8 830 307 95 0 chr20 24635200 24635506 -42032499 + L2 LINE L2 633 967 -2347 736 261 103 52 chr20 24635506 24635595 -42032410 - L1MEc LINE L1 -5609 787 704 712 204 8 0 chr20 24635595 24635727 -42032278 + FLAM_A SINE Alu 1 133 0 736 261 103 52 chr20 24635727 24636005 -42032000 - L1MEc LINE L1 -5692 704 401 339 218 178 20 chr20 24636173 24636274 -42031731 - L1MEc LINE L1 -6010 386 270 225 0 0 0 chr20 24636303 24636328 -42031677 + (GA)n Simple_repeat Simple_repeat 2 26 0 376 203 0 0 chr20 24636336 24636405 -42031600 - L1MEc LINE L1 -6294 102 34 3704 274 141 19 chr20 24636417 24636700 -42031305 + L2 LINE L2 996 1243 -2070 729 0 0 0 chr20 24636700 24636781 -42031224 + (TTCTC)n Simple_repeat Simple_repeat 1 81 0 3704 274 141 19 chr20 24636781 24638511 -42029494 + L2 LINE L2 1243 3305 -8 295 278 0 14 chr20 24639722 24639794 -42028211 + (TG)n Simple_repeat Simple_repeat 1 71 0 432 258 139 57 chr20 24640670 24641023 -42026982 + MLT1J1 LTR MaLR 15 396 -50 * 1356 255 81 9 chr20 24641003 24641434 -42026571 - MLT1C LTR MaLR -5 462 1 253 143 0 82 chr20 24641443 24641492 -42026513 + MLT1J2 LTR MaLR 403 447 -3 1547 183 42 25 chr20 24642433 24642717 -42025288 - AluJo SINE Alu -23 289 1 5392 170 49 15 chr20 24642717 24644545 -42023460 - L1MC1 LINE L1 -9 6324 4596 7475 208 30 25 chr20 24644550 24645088 -42022917 - L1 LINE L1 -2451 4337 3803 1560 199 19 13 chr20 24645088 24645395 -42022610 - AluJo SINE Alu -3 309 1 7475 208 30 25 chr20 24645395 24648354 -42019651 - L1 LINE L1 -2985 3803 844 1565 211 61 12 chr20 24648913 24649390 -42018615 - L1MCa LINE L1 -4630 1977 1290 2204 108 0 40 chr20 24649390 24649714 -42018291 - AluY SINE Alu 0 311 1 946 201 91 42 chr20 24649731 24650069 -42017936 - MSTC LTR MaLR -17 348 2 6322 186 18 41 chr20 24650069 24651373 -42016632 - L1MCa LINE L1 -5133 1293 20 217 304 139 17 chr20 24651662 24651777 -42016228 - MIR SINE MIR -10 252 124 1229 196 164 116 chr20 24652019 24652341 -42015664 - MLT1F1 LTR MaLR 0 567 262 195 42 0 0 chr20 24652341 24652365 -42015640 + (GA)n Simple_repeat Simple_repeat 1 24 0 1229 196 164 116 chr20 24652365 24652404 -42015601 - MLT1F1 LTR MaLR -305 262 226 8192 141 3 0 chr20 24652404 24654559 -42013446 - L1PA10 LINE L1 -13 6155 4058 1229 196 164 116 chr20 24654559 24654739 -42013266 - MLT1F1 LTR MaLR -341 226 1 2335 248 51 11 chr20 24654908 24655540 -42012465 + L1MC4 LINE L1 7260 7916 -126 230 191 0 0 chr20 24655561 24655603 -42012402 + L1MC4 LINE L1 8000 8041 -1 479 319 22 4 chr20 24656872 24657101 -42010904 - L1M4 LINE L1 -2686 3460 3228 215 182 11 68 chr20 24657725 24657813 -42010192 + A-rich Low_complexity Low_complexity 2 84 0 258 222 0 0 chr20 24658672 24658726 -42009279 + MER103 DNA DNA 58 111 -55 28 29 0 0 chr20 24659243 24659278 -42008727 + AT_rich Low_complexity Low_complexity 1 35 0 25 0 0 0 chr20 24659690 24659715 -42008290 + AT_rich Low_complexity Low_complexity 1 25 0 318 212 106 78 chr20 24659757 24659936 -42008069 - L1ME3 LINE L1 -45 6117 5934 243 0 0 0 chr20 24659940 24659967 -42008038 + (A)n Simple_repeat Simple_repeat 1 27 0 2363 107 3 22 chr20 24659979 24660344 -42007661 - L1PA15 LINE L1 -13 6152 5795 582 264 165 24 chr20 24660350 24660683 -42007322 - L1ME3 LINE L1 -219 5943 5564 269 245 0 0 chr20 24660759 24660812 -42007193 + MER31B LTR ERV1 5 57 -409 1106 45 0 0 chr20 24660818 24660952 -42007053 - L1PA5 LINE L1 -6 6148 6015 2513 30 7 0 chr20 24660952 24661253 -42006752 + L1P LINE L1 4918 5220 -926 1846 226 92 7 chr20 24661255 24661711 -42006294 + MER67A LTR ERV1 49 543 0 466 235 80 8 chr20 24661711 24661879 -42006126 - L1ME3 LINE L1 -720 5444 5272 1740 137 21 3 chr20 24663200 24663485 -42004520 - L1PB3 LINE L1 0 6154 5865 2136 111 7 0 chr20 24663607 24663913 -42004092 + AluSg SINE Alu 1 308 -2 2079 115 0 3 chr20 24664285 24664580 -42003425 - AluSq SINE Alu -19 294 1 204 287 11 35 chr20 24664877 24664964 -42003041 - L2 LINE L2 -58 3255 3171 235 331 86 0 chr20 24664984 24665135 -42002870 + L1MC/D LINE L1 5682 5845 -1963 1113 182 79 87 chr20 24665219 24665587 -42002418 - MLT1A1 LTR MaLR 0 365 1 1838 147 0 0 chr20 24665823 24666154 -42001851 - AluSq SINE Alu 0 331 1 27 49 0 0 chr20 24666163 24666204 -42001801 + AT_rich Low_complexity Low_complexity 1 41 0 210 118 0 0 chr20 24666333 24666367 -42001638 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 231 114 0 0 chr20 24666485 24666520 -42001485 + (TG)n Simple_repeat Simple_repeat 2 36 0 788 276 54 44 chr20 24666656 24667062 -42000943 - MER20B DNA MER1_type -373 410 1 198 331 31 86 chr20 24669959 24670088 -41997917 - MIR SINE MIR -38 224 104 1074 269 85 45 chr20 24670088 24670560 -41997445 + LTR16C LTR ERVL 1 491 0 198 331 31 86 chr20 24670560 24670593 -41997412 - MIR SINE MIR -158 104 71 1536 134 24 38 chr20 24671412 24671703 -41996302 - L1MB3 LINE L1 0 6183 5897 1525 243 31 21 chr20 24671843 24672325 -41995680 + L1MC1 LINE L1 4159 4645 -1501 1615 251 63 2 chr20 24673739 24674266 -41993739 + L1MC1 LINE L1 4637 5195 -951 41896 66 6 1 chr20 24674267 24680383 -41987622 + L1PA5 LINE L1 2 6154 0 6105 158 27 3 chr20 24680384 24681503 -41986502 + L1MC1 LINE L1 5188 6333 0 1126 319 158 37 chr20 24681546 24681993 -41986012 + L2 LINE L2 1377 1768 -1545 1842 123 0 60 chr20 24681993 24682309 -41985696 + AluSx SINE Alu 1 297 -15 1126 319 158 37 chr20 24682309 24683312 -41984693 + L2 LINE L2 1768 3044 -269 333 0 0 0 chr20 24683409 24683446 -41984559 + (CA)n Simple_repeat Simple_repeat 1 37 0 343 311 11 0 chr20 24683458 24683548 -41984457 + L2 LINE L2 3223 3313 0 1825 162 33 0 chr20 24683682 24684015 -41983990 + L1MA7 LINE L1 5795 6138 -153 196 269 124 48 chr20 24685202 24685347 -41982658 - MIR SINE MIR -64 144 9 2280 232 16 33 chr20 24685818 24686395 -41981610 + MLT1F1 LTR MaLR 1 567 0 245 279 36 18 chr20 24686518 24686629 -41981376 + LTR33 LTR ERVL 405 517 -4 2164 82 0 33 chr20 24687282 24687587 -41980418 + AluY SINE Alu 1 295 -16 613 170 9 9 chr20 24689200 24689312 -41978693 - MER53 DNA DNA -77 112 1 509 312 25 10 chr20 24689315 24689514 -41978491 - LTR16A LTR ERVL -75 375 174 860 239 140 51 chr20 24690076 24690432 -41977573 - LTR16C LTR ERVL 0 491 104 230 358 62 0 chr20 24690595 24690771 -41977234 - L2 LINE L2 -339 2975 2789 307 300 11 94 chr20 24691641 24691821 -41976184 + MIR3 SINE MIR 3 167 -41 282 250 313 25 chr20 24691884 24692044 -41975961 + MIR SINE MIR 2 207 -55 345 279 50 14 chr20 24692177 24692317 -41975688 - LTR67 LTR ERVL -4 553 409 1629 140 64 0 chr20 24692746 24693011 -41974994 + AluSx SINE Alu 19 300 -12 347 314 73 73 chr20 24693698 24693946 -41974059 - MIR SINE MIR -3 259 12 189 107 0 0 chr20 24693962 24693990 -41974015 + (CAGA)n Simple_repeat Simple_repeat 3 30 0 2303 68 0 0 chr20 24694138 24694470 -41973535 - AluY SINE Alu 0 311 1 223 304 14 0 chr20 24694983 24695052 -41972953 + (TG)n Simple_repeat Simple_repeat 1 70 0 832 267 123 11 chr20 24695404 24695778 -41972227 - LTR16A1 LTR ERVL -34 423 8 624 228 6 6 chr20 24696137 24696308 -41971697 - L1M4 LINE L1 -1695 4451 4281 625 252 70 93 chr20 24696980 24697397 -41970608 - MLT1I LTR MaLR 0 409 3 353 222 22 22 chr20 24698738 24698828 -41969177 - MIR SINE MIR -67 141 52 22 0 0 0 chr20 24698883 24698905 -41969100 + AT_rich Low_complexity Low_complexity 1 22 0 2706 78 0 3 chr20 24698909 24699257 -41968748 - L1PA8 LINE L1 -12 6160 5814 720 182 0 8 chr20 24699348 24699480 -41968525 - L1PA16 LINE L1 -9 6157 6027 187 171 14 114 chr20 24699706 24699776 -41968229 + MIR SINE MIR 170 232 -30 652 261 34 0 chr20 24700696 24700903 -41967102 - Charlie5 DNA MER1_type -27 2585 2372 1951 101 64 13 chr20 24701048 24701346 -41966659 - AluSp SINE Alu 0 313 1 240 174 261 0 chr20 24701615 24701684 -41966321 + L1MB7 LINE L1 6089 6175 -9 546 188 0 0 chr20 24701685 24701850 -41966155 + GA-rich Low_complexity Low_complexity 2 166 0 309 99 39 72 chr20 24701853 24702079 -41965926 + HERV17 LTR ERV1 704 852 -7774 192 40 0 0 chr20 24702725 24702750 -41965255 + (TCTG)n Simple_repeat Simple_repeat 2 26 0 234 0 0 0 chr20 24703705 24703731 -41964274 + (TA)n Simple_repeat Simple_repeat 2 27 0 1977 101 0 60 chr20 24703731 24704047 -41963958 - AluSc SINE Alu -12 297 1 201 225 0 0 chr20 24705059 24705099 -41962906 + GA-rich Low_complexity Low_complexity 3 42 0 540 224 38 93 chr20 24706658 24706841 -41961164 - MIR SINE MIR -28 234 62 655 275 100 53 chr20 24707031 24707543 -41960462 + MLT1H1 LTR MaLR 14 549 -6 611 228 0 0 chr20 24709175 24709289 -41958716 + MER58B DNA MER1_type 227 340 -1 2420 174 26 2 chr20 24709382 24709797 -41958208 - MSTB LTR MaLR -1 425 1 276 223 0 0 chr20 24709829 24709932 -41958073 + (CA)n Simple_repeat Simple_repeat 2 104 0 503 275 161 0 chr20 24710191 24710427 -41957578 + LTR16C LTR ERVL 180 453 -38 369 323 76 46 chr20 24714298 24714666 -41953339 - L2 LINE L2 -467 2847 2469 219 125 0 0 chr20 24715154 24715194 -41952811 + (TG)n Simple_repeat Simple_repeat 1 40 0 350 161 0 0 chr20 24715934 24715990 -41952015 - MLT1H LTR MaLR -4 545 490 23 54 0 0 chr20 24716983 24717020 -41950985 + AT_rich Low_complexity Low_complexity 1 37 0 971 165 18 18 chr20 24717331 24717501 -41950504 - MLT1A1 LTR MaLR 0 365 196 648 144 0 0 chr20 24717497 24717587 -41950418 - 5S rRNA rRNA -31 90 1 * 637 211 147 42 chr20 24717589 24717779 -41950226 - MLT1A1 LTR MaLR -155 210 1 386 299 138 19 chr20 24718412 24718723 -41949282 - L1MC/D LINE L1 -2194 5614 5267 230 283 62 26 chr20 24719299 24719412 -41948593 - HAL1b LINE L1 -437 911 795 1351 238 101 52 chr20 24719460 24720022 -41947983 - MLT1G LTR MaLR 0 590 1 393 287 82 94 chr20 24720195 24720536 -41947469 + L2 LINE L2 2932 3268 -4 676 260 96 29 chr20 24720578 24720963 -41947042 - HAL1b LINE L1 -472 876 466 334 219 62 110 chr20 24720980 24721050 -41946955 + MIR SINE MIR 15 76 -186 1251 210 37 43 chr20 24721050 24721350 -41946655 - AluJb SINE Alu -14 298 1 334 219 62 110 chr20 24721350 24721425 -41946580 + MIR SINE MIR 76 153 -109 443 223 46 69 chr20 24721793 24721923 -41946082 - MER63 DNA MER1_type -82 754 2 12218 135 53 72 chr20 24722030 24722329 -41945676 + Tigger1 DNA MER2_type 2 305 -2113 1894 152 10 0 chr20 24722329 24722618 -41945387 - AluSx SINE Alu -20 292 1 12218 135 53 72 chr20 24722618 24724782 -41943223 + Tigger1 DNA MER2_type 305 2418 0 289 119 0 0 chr20 24724796 24724838 -41943167 - 5S rRNA rRNA -79 42 1 464 264 87 10 chr20 24724888 24725096 -41942909 - HAL1b LINE L1 -897 451 228 2282 98 0 3 chr20 24725242 24725538 -41942467 - AluY SINE Alu -16 295 1 2056 276 88 27 chr20 24726045 24726978 -41941027 + Zaphod DNA AcHobo 1 990 -3041 743 216 37 26 chr20 24727033 24727223 -41940782 - MER20 DNA MER1_type -26 193 2 767 288 117 8 chr20 24727234 24727585 -41940420 + Zaphod DNA AcHobo 3600 3988 -43 323 253 91 7 chr20 24728328 24728482 -41939523 + L1ME1 LINE L1 5747 5913 -208 1165 240 122 6 chr20 24728516 24728828 -41939177 + MER7A DNA MER2_type 1 346 0 1302 253 118 28 chr20 24729979 24730525 -41937480 - L1ME2 LINE L1 -16 6148 5549 276 345 30 36 chr20 24730529 24730697 -41937308 - MIR3 SINE MIR -6 202 36 206 347 20 0 chr20 24731112 24731210 -41936795 - L2 LINE L2 -1318 1996 1897 465 279 43 0 chr20 24731354 24731494 -41936511 - L2 LINE L2 -1536 1778 1633 244 277 109 34 chr20 24732334 24732453 -41935552 + MIR SINE MIR 64 191 -71 2716 136 21 2 chr20 24732735 24733155 -41934850 + MSTA LTR MaLR 1 428 0 399 308 117 62 chr20 24733967 24734240 -41933765 - L2 LINE L2 0 3272 2985 358 244 0 0 chr20 24734249 24734335 -41933670 - L2 LINE L2 -1078 2236 2151 192 269 52 90 chr20 24734672 24734806 -41933199 - L2 LINE L2 -700 2614 2486 404 332 72 11 chr20 24736678 24736955 -41931050 + L2 LINE L2 1993 2286 -1028 315 330 176 10 chr20 24736993 24737463 -41930542 + L2 LINE L2 2503 3049 -223 605 236 130 17 chr20 24738152 24738358 -41929647 + L1ME1 LINE L1 5943 6170 0 865 289 57 21 chr20 24738606 24739076 -41928929 - LTR16C LTR ERVL -2 489 3 302 300 91 50 chr20 24739306 24739526 -41928479 - MIR SINE MIR -13 249 21 404 191 152 0 chr20 24740232 24740337 -41927668 + LTR16C LTR ERVL 371 491 0 234 202 42 34 chr20 24742310 24742429 -41925576 + GA-rich Low_complexity Low_complexity 1 120 0 311 237 68 8 chr20 24743879 24743997 -41924008 + MIR SINE MIR 109 233 -29 434 293 0 14 chr20 24745080 24745220 -41922785 + MER117 DNA MER1_type 58 195 -2 282 369 28 0 chr20 24746557 24746698 -41921307 - MIR SINE MIR -71 191 47 210 239 0 0 chr20 24746881 24746927 -41921078 + L2 LINE L2 3227 3272 0 1513 234 165 17 chr20 24746950 24747121 -41920884 - MLT1D LTR MaLR -7 498 354 1450 122 8 239 chr20 24747121 24747645 -41920360 - MER57A LTR ERV1 0 403 1 1513 234 165 17 chr20 24747645 24747891 -41920114 - MLT1D LTR MaLR -151 354 19 185 379 11 0 chr20 24748131 24748226 -41919779 + MIR SINE MIR 123 218 -44 205 351 32 0 chr20 24750555 24750649 -41917356 + L2 LINE L2 3204 3300 -13 231 271 25 57 chr20 24751043 24751165 -41916840 - LTR67 LTR ERVL -14 543 426 1296 249 148 15 chr20 24752963 24753441 -41914564 + L1MC4 LINE L1 7362 7903 -139 186 211 0 0 chr20 24753814 24753852 -41914153 - MIR3 SINE MIR -53 155 118 21 0 0 0 chr20 24754529 24754550 -41913455 + AT_rich Low_complexity Low_complexity 1 21 0 306 0 0 0 chr20 24756409 24756443 -41911562 + (TA)n Simple_repeat Simple_repeat 2 35 0 4171 56 9 34 chr20 24756550 24757107 -41910898 - L1PA8 LINE L1 -8 6164 5622 690 292 75 59 chr20 24757251 24757744 -41910261 - MLT1J LTR MaLR 0 511 11 1861 253 32 26 chr20 24757820 24758319 -41909686 + LTR45 LTR ERV1 22 523 -2 489 287 72 29 chr20 24758319 24758520 -41909485 - MLT1J LTR MaLR -192 319 110 355 247 47 20 chr20 24758913 24759063 -41908942 - MER103 DNA DNA -9 157 4 429 263 28 38 chr20 24759827 24760040 -41907965 + L1ME4a LINE L1 5846 6056 -65 2204 111 0 13 chr20 24760199 24760506 -41907499 - AluSx SINE Alu -9 303 1 418 222 0 0 chr20 24762369 24762450 -41905555 - L1MC4 LINE L1 -20 8022 7942 1010 244 109 0 chr20 24762476 24762787 -41905218 - L1MC4 LINE L1 -183 7859 7515 27 0 0 0 chr20 24764519 24764546 -41903459 + AT_rich Low_complexity Low_complexity 1 27 0 1714 197 29 36 chr20 24764546 24764962 -41903043 - L1PB4 LINE L1 0 6156 5744 312 240 70 16 chr20 24764964 24765093 -41902912 + LTR16C LTR ERVL 355 490 -1 2191 121 3 3 chr20 24765749 24766046 -41901959 - AluJb SINE Alu -15 297 1 295 222 0 14 chr20 24767151 24767223 -41900782 + MIR SINE MIR 116 186 -76 460 223 197 72 chr20 24768507 24768832 -41899173 + MLT1H LTR MaLR 51 533 -16 5498 196 33 85 chr20 24769650 24770209 -41897796 + L1MC1 LINE L1 3915 4501 -1832 6966 65 6 28 chr20 24770209 24771879 -41896126 - L1PA7 LINE L1 -16 6138 4488 5498 196 33 85 chr20 24771879 24773860 -41894145 + L1MC1 LINE L1 4501 6317 -16 798 203 14 6 chr20 24774202 24774850 -41893155 + CT-rich Low_complexity Low_complexity 1 653 0 255 302 9 35 chr20 24775036 24775152 -41892853 - L2 LINE L2 -193 3079 2967 1073 234 95 58 chr20 24775430 24775840 -41892165 - LTR16A LTR ERVL -10 440 16 777 266 178 23 chr20 24776864 24777218 -41890787 + LTR16C LTR ERVL 83 491 0 347 256 116 18 chr20 24777982 24778146 -41889859 + L3b LINE CR1 1161 1340 -243 2158 107 14 0 chr20 24778210 24778500 -41889505 - AluSg1 SINE Alu -15 294 1 299 117 333 0 chr20 24778724 24778784 -41889221 - MADE1 DNA Mariner 0 80 1 464 165 10 31 chr20 24783232 24783329 -41884676 - FLAM_C SINE Alu -2 141 47 1553 216 50 41 chr20 24783550 24784013 -41883992 + MLT1C LTR MaLR 1 467 0 231 293 60 29 chr20 24784450 24784604 -41883401 + MIR SINE MIR 44 205 -57 2732 241 39 31 chr20 24786519 24787294 -41880711 + L1MCb LINE L1 -135 645 -5262 1250 188 43 14 chr20 24787278 24787716 -41880289 + L1MCb LINE L1 1443 2253 -4173 * 5112 110 37 0 chr20 24787722 24788460 -41879545 + L1PA14 LINE L1 5397 6161 0 1220 254 89 41 chr20 24788453 24789503 -41878502 + L1MEc LINE L1 1660 2693 -3522 * 6726 175 41 11 chr20 24789624 24791443 -41876562 + L1MA9 LINE L1 3975 5842 -470 * 36727 100 16 21 chr20 24791416 24797388 -41870617 + L1MD2 LINE L1 433 6358 -1 549 288 48 92 chr20 24797848 24798303 -41869702 - L2 LINE L2 0 3313 2879 597 316 163 38 chr20 24798971 24799708 -41868297 + L2 LINE L2 2448 3272 0 218 189 0 0 chr20 24799752 24799789 -41868216 + CT-rich Low_complexity Low_complexity 2 38 0 969 297 105 13 chr20 24804038 24804428 -41863577 + LTR16A1 LTR ERVL 26 451 -6 360 246 55 9 chr20 24805687 24805797 -41862208 + MLT1K LTR MaLR 349 463 -125 3874 214 38 37 chr20 24806266 24806699 -41861306 + L1MCb LINE L1 1 432 -6132 192 40 0 0 chr20 24806699 24806724 -41861281 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 3874 214 38 37 chr20 24806724 24808105 -41859900 + L1MCb LINE L1 432 1930 -4634 711 183 4 55 chr20 24808098 24808325 -41859680 - L1ME2 LINE L1 -307 5857 5653 * 26 34 0 51 chr20 24808399 24808458 -41859547 + AT_rich Low_complexity Low_complexity 1 56 0 1479 202 59 24 chr20 24808500 24808700 -41859305 + L1MC2 LINE L1 5960 6178 -166 2284 92 0 20 chr20 24808700 24809003 -41859002 + AluY SINE Alu 2 298 -13 1479 202 59 24 chr20 24809003 24809139 -41858866 + L1MC2 LINE L1 6178 6308 -36 27986 42 5 2 chr20 24809188 24813417 -41854588 - L1PA4 LINE L1 0 6549 1933 244 25 75 0 chr20 24813731 24813771 -41854234 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 6740 80 10 10 chr20 24813771 24814752 -41853253 - L1PA8 LINE L1 -22 6150 5172 2734 182 16 0 chr20 24815394 24815895 -41852110 - L1MC3 LINE L1 -15 7770 7262 454 314 98 18 chr20 24815978 24816248 -41851757 - ERVL LTR ERVL -185 5300 5047 957 276 65 17 chr20 24816284 24816639 -41851366 - ERVL LTR ERVL -804 4960 4589 2061 151 0 22 chr20 24816668 24817024 -41850981 - AluSx SINE Alu 0 349 1 453 288 22 33 chr20 24817038 24817222 -41850783 - ERVL LTR ERVL -1223 4541 4360 691 253 152 81 chr20 24817229 24817711 -41850294 - LTR33 LTR ERVL 0 521 6 1389 260 56 46 chr20 24819280 24819780 -41848225 - MLT1D LTR MaLR 0 505 1 994 270 118 6 chr20 24820294 24820650 -41847355 - LTR16C LTR ERVL 0 491 96 10898 161 13 27 chr20 24822039 24822392 -41845613 - L1PA12 LINE L1 -10 6158 5801 2143 130 0 0 chr20 24822392 24822692 -41845313 - AluSx SINE Alu -11 301 2 10898 161 13 27 chr20 24822692 24825079 -41842926 - L1PA12 LINE L1 -367 5801 3465 6069 166 25 5 chr20 24825664 24825941 -41842064 - L1PA12 LINE L1 -2689 3457 3187 338 0 24 0 chr20 24825941 24825983 -41842022 + (TTG)n Simple_repeat Simple_repeat 2 44 0 6069 166 25 5 chr20 24825983 24826816 -41841189 - L1PA12 LINE L1 -2959 3187 2324 400 276 103 22 chr20 24827693 24827878 -41840127 + L1ME LINE L1 10 209 -5910 280 346 84 5 chr20 24828140 24828342 -41839663 + L1ME LINE L1 4941 5158 -971 285 29 0 0 chr20 24828407 24828441 -41839564 + (GA)n Simple_repeat Simple_repeat 2 35 0 543 282 91 31 chr20 24828451 24828914 -41839091 + L1ME LINE L1 5262 5756 -397 228 246 0 0 chr20 24829966 24830035 -41837970 + (CA)n Simple_repeat Simple_repeat 2 70 0 1635 154 7 40 chr20 24831099 24831397 -41836608 + AluJo SINE Alu 2 289 -23 274 356 171 19 chr20 24831474 24832002 -41836003 - L3 LINE CR1 -154 1423 816 386 305 8 15 chr20 24832429 24832560 -41835445 + LTR16C LTR ERVL 362 491 0 2345 168 72 2 chr20 24832999 24833399 -41834606 + MSTA LTR MaLR 1 428 0 210 118 0 0 chr20 24833855 24833889 -41834116 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 2386 87 0 0 chr20 24835779 24836079 -41831926 - AluY SINE Alu -11 300 1 1037 214 78 0 chr20 24836158 24836401 -41831604 + L1MA8 LINE L1 6027 6288 -3 925 236 134 99 chr20 24836844 24837387 -41830618 - MLT1G LTR MaLR -33 557 1 2027 138 7 7 chr20 24837944 24838248 -41829757 + AluSx SINE Alu 9 312 0 1067 288 91 11 chr20 24839335 24839710 -41828295 - LTR16C LTR ERVL -14 477 73 8134 235 11 4 chr20 24839900 24841766 -41826239 + L1PA15 LINE L1 2761 4640 -1506 5452 128 17 19 chr20 24841759 24842620 -41825385 + L1PA15 LINE L1 5304 6163 -2 * 695 169 8 0 chr20 24842691 24842809 -41825196 - L1MA10 LINE L1 -2 6332 6214 2255 101 0 7 chr20 24843622 24843920 -41824085 - AluSg SINE Alu -9 301 6 684 239 33 11 chr20 24845305 24845485 -41822520 + MER5A DNA MER1_type 1 184 -5 1047 308 40 0 chr20 24845610 24845931 -41822074 + LTR16C LTR ERVL 146 479 -12 690 209 7 7 chr20 24846432 24846580 -41821425 - LTR32 LTR ERVL 0 471 324 1770 158 20 69 chr20 24846594 24846705 -41821300 - LTR32 LTR ERVL -126 345 230 2231 110 0 7 chr20 24846705 24847005 -41821000 - AluSx SINE Alu -14 298 1 1770 158 20 69 chr20 24847005 24847241 -41820764 - LTR32 LTR ERVL -241 230 15 1075 297 71 2 chr20 24848147 24848568 -41819437 + LTR16C LTR ERVL 42 491 0 874 318 135 38 chr20 24848850 24849815 -41818190 - L2 LINE L2 -518 2796 1739 229 302 139 62 chr20 24851177 24851306 -41816699 - L2 LINE L2 0 3272 3134 21 82 0 0 chr20 24851490 24851539 -41816466 + AT_rich Low_complexity Low_complexity 1 49 0 23 0 0 0 chr20 24851583 24851606 -41816399 + AT_rich Low_complexity Low_complexity 1 23 0 12075 185 8 22 chr20 24851826 24852982 -41815023 - L1PB1 LINE L1 -4 6863 5693 2017 119 13 29 chr20 24852982 24853293 -41814712 - AluSx SINE Alu -2 310 5 12075 185 8 22 chr20 24853293 24855758 -41812247 - L1PB1 LINE L1 -1174 5693 3295 245 216 0 0 chr20 24855747 24855798 -41812207 - L1P LINE L1 -2057 4089 4039 * 4116 222 93 3 chr20 24855815 24856849 -41811156 - L1PB1 LINE L1 -5706 1157 31 3150 198 51 11 chr20 24856861 24857661 -41810344 - L1MD3 LINE L1 -4 7991 6951 221 0 0 33 chr20 24857832 24857862 -41810143 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 231 309 41 21 chr20 24857968 24858065 -41809940 - MIR SINE MIR -73 135 36 227 332 85 68 chr20 24858324 24858914 -41809091 + L2 LINE L2 2351 2950 -364 592 235 161 0 chr20 24858963 24859112 -41808893 + MER5A DNA MER1_type 10 182 -7 323 266 32 21 chr20 24859317 24859411 -41808594 - L2 LINE L2 -5 3267 3173 180 387 52 23 chr20 24859677 24859850 -41808155 - L3 LINE CR1 -11 1566 1389 1906 151 20 7 chr20 24860013 24860318 -41807687 - AluSx SINE Alu -3 309 1 271 313 36 71 chr20 24860417 24860529 -41807476 - LTR16C LTR ERVL -277 214 107 245 29 29 0 chr20 24862268 24862302 -41805703 + (CA)n Simple_repeat Simple_repeat 1 35 0 508 246 55 55 chr20 24862845 24863028 -41804977 - MER5A DNA MER1_type 0 189 7 183 156 0 0 chr20 24864783 24864815 -41803190 + CT-rich Low_complexity Low_complexity 2 33 0 219 360 27 9 chr20 24866106 24866217 -41801788 + L2 LINE L2 2563 2675 -639 913 199 54 50 chr20 24866518 24866779 -41801226 - L1MD3 LINE L1 0 7995 7734 2413 146 23 50 chr20 24866782 24867220 -41800785 + Tigger2a DNA MER2_type 1 426 -8 415 267 52 7 chr20 24867225 24867360 -41800645 - L1MD3 LINE L1 -261 7734 7594 21 36 0 0 chr20 24867609 24867637 -41800368 + AT_rich Low_complexity Low_complexity 1 28 0 230 71 0 48 chr20 24868962 24869004 -41799001 + (CATA)n Simple_repeat Simple_repeat 2 41 0 2051 63 0 4 chr20 24869863 24870117 -41797888 + AluY SINE Alu 44 296 -15 440 329 74 18 chr20 24870183 24870520 -41797485 - L1M4 LINE L1 -2106 4040 3685 1295 203 78 73 chr20 24871350 24871729 -41796276 - MLT2B1 LTR ERVL 0 397 1 289 264 165 8 chr20 24871729 24871850 -41796155 - L1M4 LINE L1 -3331 2815 2676 190 316 88 0 chr20 24872230 24872287 -41795718 + MIR SINE MIR 6 67 -195 190 347 0 13 chr20 24872331 24872406 -41795599 + MIR SINE MIR 189 262 0 24 32 0 0 chr20 24872407 24872438 -41795567 + AT_rich Low_complexity Low_complexity 1 31 0 5740 246 31 40 chr20 24873156 24873357 -41794648 - L1 LINE L1 -2055 3915 3714 2279 85 0 0 chr20 24873357 24873664 -41794341 - AluSg SINE Alu 0 307 1 5740 246 31 40 chr20 24873664 24875398 -41792607 - L1 LINE L1 -2256 3714 1996 3742 242 51 38 chr20 24875394 24876798 -41791207 - L1 LINE L1 -4189 1781 365 * 387 41 0 0 chr20 24876857 24876906 -41791099 + (TG)n Simple_repeat Simple_repeat 2 50 0 438 323 67 70 chr20 24877076 24877463 -41790542 - L1 LINE L1 -5505 386 1 1267 303 26 16 chr20 24878285 24878668 -41789337 - LTR16C LTR ERVL -29 462 76 258 345 57 48 chr20 24880125 24880334 -41787671 - L2 LINE L2 -3 3269 3059 1167 252 47 47 chr20 24880530 24881054 -41786951 - MLT1E LTR MaLR 0 593 19 2380 80 0 40 chr20 24881885 24882209 -41785796 - AluY SINE Alu 0 311 1 466 268 8 16 chr20 24882222 24882349 -41785656 - L2 LINE L2 -1 3312 3187 2286 236 115 20 chr20 24882386 24883091 -41784914 + L1MC4 LINE L1 7271 8042 0 252 384 46 9 chr20 24884773 24884992 -41783013 - MIR SINE MIR -28 234 8 1445 233 88 9 chr20 24885241 24885674 -41782331 - Charlie4a DNA MER1_type -8 500 34 1441 236 53 17 chr20 24886584 24886945 -41781060 - MLT1A2 LTR MaLR 0 374 1 2475 183 31 86 chr20 24887006 24887586 -41780419 + MLT2B3 LTR ERVL 1 548 -6 24 0 0 0 chr20 24887684 24887708 -41780297 + AT_rich Low_complexity Low_complexity 1 24 0 257 280 10 40 chr20 24887711 24887811 -41780194 - HAL1b LINE L1 -54 1294 1198 201 303 90 8 chr20 24888934 24889056 -41778949 - MIR3 SINE MIR -75 133 2 441 276 52 15 chr20 24890477 24890611 -41777394 + MER3 DNA MER1_type 1 139 -70 186 71 0 0 chr20 24890703 24890731 -41777274 + (TATTG)n Simple_repeat Simple_repeat 2 29 0 330 139 42 42 chr20 24890750 24890822 -41777183 + MER3 DNA MER1_type 136 207 -2 * 334 149 15 45 chr20 24890779 24890846 -41777159 - MER3 DNA MER1_type -117 92 28 257 329 81 31 chr20 24891024 24891185 -41776820 - MIR3 SINE MIR -10 198 30 1105 191 13 40 chr20 24891501 24891726 -41776279 + MER20 DNA MER1_type 1 219 0 1190 188 41 103 chr20 24892168 24892605 -41775400 - LTR37A LTR ERV1 0 426 17 552 351 57 25 chr20 24892679 24893152 -41774853 - L2 LINE L2 -1622 1692 1205 1715 221 82 33 chr20 24893156 24893317 -41774688 + L1MD1 LINE L1 4775 4927 -1219 291 54 0 0 chr20 24893317 24893354 -41774651 + (CAAA)n Simple_repeat Simple_repeat 4 40 0 1715 221 82 33 chr20 24893354 24893767 -41774238 + L1MD1 LINE L1 4927 5377 -769 1455 194 46 22 chr20 24893773 24894097 -41773908 + L1MD1 LINE L1 5909 6240 -2 691 275 211 51 chr20 24894098 24894847 -41773158 - L2 LINE L2 -2098 1216 348 780 204 7 0 chr20 24894848 24894990 -41773015 + MER5A DNA MER1_type 3 145 -44 2048 119 7 7 chr20 24895255 24895558 -41772447 + AluSq SINE Alu 1 303 -10 1056 208 68 24 chr20 24895966 24896216 -41771789 + MIR SINE MIR 2 262 0 280 250 75 0 chr20 24898990 24899070 -41768935 - MER5A DNA MER1_type 0 189 104 2885 90 0 3 chr20 24899199 24899555 -41768450 + THE1A LTR MaLR 1 355 0 1214 77 0 0 chr20 24899555 24899710 -41768295 + THE1A-int LTR MaLR 1 155 -1425 1681 197 37 40 chr20 24900469 24900844 -41767161 + MLT1A2 LTR MaLR 1 374 0 1653 190 3 7 chr20 24901556 24901846 -41766159 - AluJo SINE Alu -23 289 1 1091 149 139 0 chr20 24902833 24903034 -41764971 + LTR47A LTR ERVL 16 244 -208 527 158 0 0 chr20 24903070 24903152 -41764853 + MER4B-int LTR ERV1 2645 2726 -3220 332 203 14 0 chr20 24903183 24903252 -41764753 + MER34C LTR ERV1 155 224 -361 2229 128 91 13 chr20 24903264 24903647 -41764358 - MER4D LTR ERV1 -308 595 183 668 133 0 20 chr20 24903647 24903745 -41764260 + FLAM_A SINE Alu 35 130 -12 1173 137 16 5 chr20 24903745 24903935 -41764070 - MER4B LTR ERV1 -418 192 1 5574 157 54 23 chr20 24903940 24905000 -41763005 + MER4B-int LTR ERV1 2915 4007 -2751 378 216 0 68 chr20 24905014 24905102 -41762903 + MER4B-int LTR ERV1 5977 6058 -700 1699 190 78 59 chr20 24905117 24905539 -41762466 + LTR47A LTR ERVL 1 430 -22 488 250 158 0 chr20 24906082 24906246 -41761759 - L1M4 LINE L1 -2118 4028 3839 14946 199 18 7 chr20 24906288 24912801 -41755204 + L1PB1 LINE L1 6 6859 -8 1590 178 70 7 chr20 24912803 24913073 -41754932 - AluSx SINE Alu -23 289 3 682 253 51 54 chr20 24913073 24913307 -41754698 - L1M4 LINE L1 -2299 3847 3613 3192 132 78 5 chr20 24913307 24913869 -41754136 + LTR26 LTR ERV1 1 603 0 682 253 51 54 chr20 24913869 24913950 -41754055 - L1M4 LINE L1 -2533 3613 3533 1014 233 32 13 chr20 24915465 24915865 -41752140 + Charlie4a DNA MER1_type 49 493 -15 324 143 143 14 chr20 24917350 24917420 -41750585 + MLT1G1 LTR MaLR 103 181 -414 1110 241 82 11 chr20 24917420 24917785 -41750220 + L1M4 LINE L1 3626 4016 -2130 * 1955 221 85 55 chr20 24917783 24918028 -41749977 - L1MDa LINE L1 -5924 616 380 3353 182 16 3 chr20 24918028 24918644 -41749361 - L1PB4 LINE L1 -1 6155 5532 1955 221 85 55 chr20 24918644 24918976 -41749029 - L1MDa LINE L1 -6160 380 22 313 296 98 80 chr20 24918974 24919493 -41748512 - HAL1 LINE L1 -850 1657 1116 * 1240 219 131 27 chr20 24919493 24919639 -41748366 + MLT1A1 LTR MaLR 1 130 -235 2175 104 0 7 chr20 24919639 24919954 -41748051 + AluSc SINE Alu 1 313 0 1240 219 131 27 chr20 24919954 24920133 -41747872 + MLT1A1 LTR MaLR 130 362 -3 313 296 98 80 chr20 24920133 24920459 -41747546 - HAL1 LINE L1 -1391 1116 797 914 253 67 14 chr20 24920462 24920918 -41747087 + LTR33 LTR ERVL 1 513 -8 2123 173 10 30 chr20 24921009 24921407 -41746598 - MLT1B LTR MaLR 0 390 1 2194 124 50 19 chr20 24922001 24922365 -41745640 - THE1C LTR MaLR 0 375 1 1118 184 74 220 chr20 24922850 24923124 -41744881 - L1MC3 LINE L1 -2 7993 7681 972 182 0 0 chr20 24923124 24923278 -41744727 - FRAM SINE Alu -22 154 1 1118 184 74 220 chr20 24923278 24923636 -41744369 - L1MC3 LINE L1 -314 7681 7323 2616 53 0 0 chr20 24925353 24925654 -41742351 - AluY SINE Alu -10 301 1 228 279 8 33 chr20 24925827 24925888 -41742117 + (TG)n Simple_repeat Simple_repeat 1 59 -60 980 147 32 37 chr20 24925888 24926078 -41741927 + MER53 DNA DNA 1 189 0 228 279 8 33 chr20 24926078 24926138 -41741867 + (TG)n Simple_repeat Simple_repeat 59 119 0 1167 193 218 0 chr20 24926534 24926773 -41741232 + AluJo SINE Alu 1 291 -21 44645 44 4 0 chr20 24927191 24933319 -41734686 - L1PA4 LINE L1 -2 6153 2 232 269 167 0 chr20 24934389 24934467 -41733538 + MLT1L LTR MaLR 190 280 -335 353 314 124 31 chr20 24935328 24935716 -41732289 - MLT1L LTR MaLR -2 613 190 395 277 110 0 chr20 24937036 24937191 -41730814 + MER5A DNA MER1_type 18 189 0 306 0 0 0 chr20 24937268 24937302 -41730703 + (TG)n Simple_repeat Simple_repeat 2 35 0 185 314 0 47 chr20 24937586 24937672 -41730333 - L2 LINE L2 -1 3271 3190 1486 244 25 8 chr20 24939718 24940075 -41727930 - MLT1A1 LTR MaLR 0 365 3 447 314 27 50 chr20 24940864 24941084 -41726921 + LTR16C LTR ERVL 127 341 -150 309 241 46 19 chr20 24941126 24941234 -41726771 + LTR16C LTR ERVL 350 460 -31 1934 221 106 8 chr20 24941755 24942267 -41725738 - REP3 LTR ERV 0 562 1 1469 220 51 61 chr20 24942394 24942789 -41725216 - MLT2B1 LTR ERVL 0 520 130 207 0 0 0 chr20 24942827 24942850 -41725155 + (CAAT)n Simple_repeat Simple_repeat 1 23 0 631 304 103 22 chr20 24944659 24944991 -41723014 + L1M4 LINE L1 4760 5139 -1007 1067 167 12 69 chr20 24944991 24945237 -41722768 - MER46A DNA MER2_type 0 236 5 631 304 103 22 chr20 24945237 24945352 -41722653 + L1M4 LINE L1 5139 5243 -903 344 233 67 112 chr20 24945407 24945630 -41722375 - MIR SINE MIR 0 262 50 331 322 0 0 chr20 24945676 24945791 -41722214 + (TCCA)n Simple_repeat Simple_repeat 4 118 0 1962 167 11 59 chr20 24945791 24946073 -41721932 + LTR53 LTR ERVL 1 262 -257 1852 139 26 20 chr20 24946073 24946242 -41721763 - AluJb SINE Alu -8 304 131 228 35 0 0 chr20 24946242 24946271 -41721734 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1852 139 26 20 chr20 24946271 24946403 -41721602 - AluJb SINE Alu -181 131 1 1962 167 11 59 chr20 24946403 24946491 -41721514 + LTR53 LTR ERVL 262 353 -166 1598 183 3 10 chr20 24946686 24946976 -41721029 + AluJb SINE Alu 1 288 -24 203 194 45 30 chr20 24947653 24947720 -41720285 + MER5B DNA MER1_type 106 173 -5 263 223 21 64 chr20 24948619 24948713 -41719292 + L1MC4 LINE L1 6614 6703 -1339 234 222 0 0 chr20 24948713 24948767 -41719238 + (TA)n Simple_repeat Simple_repeat 2 55 0 308 276 23 0 chr20 24948772 24948859 -41719146 + L1MC4 LINE L1 6615 6703 -1339 229 263 0 53 chr20 24948869 24948964 -41719041 + L1MC4 LINE L1 6614 6703 -1339 1841 163 0 0 chr20 24950313 24950601 -41717404 + AluSx SINE Alu 24 311 -1 383 275 45 110 chr20 24951674 24951874 -41716131 + MER102b DNA MER1_type 155 341 0 888 150 0 0 chr20 24953423 24953550 -41714455 + AluSq/x SINE Alu 1 127 -186 2120 110 41 0 chr20 24953588 24953878 -41714127 + AluSq SINE Alu 1 302 -11 241 326 52 22 chr20 24953880 24954015 -41713990 - L2 LINE L2 -351 2962 2824 2378 112 0 0 chr20 24954117 24954421 -41713584 - AluSq SINE Alu -9 304 1 2694 205 2 4 chr20 24954773 24955260 -41712745 - MER66B LTR ERV1 0 486 1 207 306 94 0 chr20 24955790 24955875 -41712130 - MIR SINE MIR -168 94 2 1141 284 108 55 chr20 24956201 24956925 -41711080 - L1ME LINE L1 -5178 892 131 356 307 34 45 chr20 24956954 24957130 -41710875 - MIR SINE MIR -70 192 19 823 270 32 48 chr20 24957876 24958124 -41709881 + MIR SINE MIR 19 262 0 450 276 0 0 chr20 24958165 24958328 -41709677 + (CTA)n Simple_repeat Simple_repeat 3 165 0 609 157 38 148 chr20 24958426 24958636 -41709369 + MER53 DNA DNA 3 189 0 219 36 0 0 chr20 24958692 24958720 -41709285 + (CA)n Simple_repeat Simple_repeat 2 29 0 4304 131 16 0 chr20 24960026 24960651 -41707354 + MER41B LTR ERV1 1 635 0 2345 158 77 2 chr20 24962393 24962822 -41705183 - MER65C LTR ERV1 0 461 1 2790 159 22 26 chr20 24963128 24963524 -41704481 + LTR26B LTR ERV1 1 396 -135 2595 106 30 52 chr20 24963524 24963931 -41704074 - MER48 LTR ERV1 0 398 1 2790 159 22 26 chr20 24963931 24964067 -41703938 + LTR26B LTR ERV1 396 531 0 * 2804 183 72 13 chr20 24964067 24964674 -41703331 - LTR51 LTR ERV1 -28 643 1 321 298 97 9 chr20 24964731 24964845 -41703160 - L1ME4a LINE L1 0 6121 5998 677 226 142 17 chr20 24964882 24965098 -41702907 - L1MC4 LINE L1 -6 8036 7848 2953 85 31 3 chr20 24965098 24965485 -41702520 - MER48 LTR ERV1 0 398 1 677 226 142 17 chr20 24965485 24965572 -41702433 - L1MC4 LINE L1 -194 7848 7602 876 273 11 8 chr20 24965607 24965874 -41702131 - L1MC4 LINE L1 -467 7575 7308 568 258 56 11 chr20 24966194 24966372 -41701633 - MER5A DNA MER1_type 0 189 4 217 273 78 116 chr20 24966974 24967216 -41700789 + L2 LINE L2 3040 3272 0 322 267 35 0 chr20 24967646 24967732 -41700273 + MER92A LTR ERV1 1 89 -323 1630 249 83 26 chr20 24968817 24969308 -41698697 + LTR40a LTR ERVL 1 519 0 217 286 14 0 chr20 24969781 24969851 -41698154 + MIR SINE MIR 192 262 0 * 251 310 120 0 chr20 24969810 24969952 -41698053 - MIR SINE MIR -18 244 86 358 310 116 13 chr20 24969955 24970257 -41697748 - MLT1L LTR MaLR -7 608 187 588 276 43 5 chr20 24970435 24970620 -41697385 + MER3 DNA MER1_type 18 209 0 1063 194 70 0 chr20 24970702 24970975 -41697030 - MER33 DNA MER1_type -13 311 20 540 225 73 17 chr20 24971077 24971255 -41696750 - MER5A DNA MER1_type 0 189 2 525 301 39 7 chr20 24972707 24972860 -41695145 + MER5B DNA MER1_type 21 178 0 27 29 0 0 chr20 24974893 24974927 -41693078 + GC_rich Low_complexity Low_complexity 1 34 0 24 32 0 0 chr20 24975189 24975220 -41692785 + GC_rich Low_complexity Low_complexity 1 31 0 241 192 39 0 chr20 24978209 24978261 -41689744 + MIR SINE MIR 89 142 -120 292 346 63 79 chr20 24979483 24979798 -41688207 - L2 LINE L2 -84 3229 2920 249 236 0 45 chr20 24980695 24980784 -41687221 - L1ME3 LINE L1 -1 6161 6080 186 344 264 0 chr20 24983071 24983234 -41684771 - MIR SINE MIR -10 252 47 444 325 94 63 chr20 24983486 24983944 -41684061 + L2 LINE L2 2838 3309 -4 252 0 0 0 chr20 24984037 24984065 -41683940 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 294 274 191 45 chr20 24985989 24986146 -41681859 - MER5A DNA MER1_type -2 187 8 21 0 0 0 chr20 24987006 24987027 -41680978 + AT_rich Low_complexity Low_complexity 1 21 0 442 221 71 0 chr20 24991293 24991406 -41676599 - MER45A DNA AcHobo 0 178 58 731 251 47 38 chr20 24993414 24993649 -41674356 + MIR SINE MIR 18 254 -8 187 359 31 0 chr20 24993695 24993759 -41674246 + L2 LINE L2 3199 3264 -8 423 315 15 0 chr20 24993862 24993992 -41674013 - MIR SINE MIR -75 187 56 214 294 160 8 chr20 24994034 24994153 -41673852 + MIR SINE MIR 52 188 -74 1607 184 7 34 chr20 24994386 24994680 -41673325 - AluJb SINE Alu -26 286 1 4957 192 55 34 chr20 24995153 24996819 -41671186 + L1MB8 LINE L1 4004 5725 -453 2296 116 0 10 chr20 24996819 24997121 -41670884 - AluSc SINE Alu -10 299 1 4957 192 55 34 chr20 24997121 24997579 -41670426 + L1MB8 LINE L1 5725 6172 -6 1478 218 26 47 chr20 24998073 24998541 -41669464 - Charlie4a DNA MER1_type -18 490 33 3758 149 64 5 chr20 24999239 24999910 -41668095 + MER50 LTR ERV1 1 711 -23 437 206 33 0 chr20 25000473 25000565 -41667440 - MER58B DNA MER1_type -19 322 228 243 242 32 0 chr20 25000587 25000649 -41667356 - MLT1F LTR MaLR -3 539 476 482 153 31 0 chr20 25002016 25002114 -41665891 + MER5A DNA MER1_type 9 109 -80 767 193 29 0 chr20 25002331 25002471 -41665534 + MER5A DNA MER1_type 43 186 -3 1175 190 36 12 chr20 25002923 25003170 -41664835 - MER58B DNA MER1_type -88 253 1 952 168 199 78 chr20 25003977 25004299 -41663706 - MLT1D LTR MaLR 0 505 145 22 0 0 0 chr20 25004524 25004546 -41663459 + AT_rich Low_complexity Low_complexity 1 22 0 468 327 128 5 chr20 25005977 25006188 -41661817 - MIR SINE MIR -12 250 14 1258 258 41 21 chr20 25006354 25006789 -41661216 + L1ME2 LINE L1 5711 6154 -10 433 275 7 35 chr20 25007334 25007476 -41660529 + MIR SINE MIR 19 156 -106 1250 194 52 49 chr20 25007843 25008167 -41659838 + MER76 LTR ERV 364 688 0 380 222 0 0 chr20 25008206 25008296 -41659709 + L1MC2 LINE L1 5152 5241 -905 1949 153 22 0 chr20 25008304 25008625 -41659380 - MER7A DNA MER2_type -19 327 2 5188 147 32 6 chr20 25008640 25009571 -41658434 + L1MC2 LINE L1 5254 6208 -136 240 241 98 18 chr20 25009573 25009685 -41658320 + MER34B LTR ERV1 1 121 -444 420 297 10 63 chr20 25009771 25009915 -41658090 + MER34B LTR ERV1 279 400 -165 2546 65 0 0 chr20 25009915 25010221 -41657784 + AluY SINE Alu 1 306 -5 420 297 10 63 chr20 25010221 25010379 -41657626 + MER34B LTR ERV1 400 565 0 356 187 37 47 chr20 25010401 25010508 -41657497 + L1MC2 LINE L1 6239 6344 0 183 129 0 0 chr20 25010552 25010583 -41657422 + (GGA)n Simple_repeat Simple_repeat 3 33 0 942 235 16 12 chr20 25010636 25010887 -41657118 + L1ME2 LINE L1 5912 6163 -1 1512 279 90 26 chr20 25012321 25012930 -41655075 - L1ME1 LINE L1 -5 6161 5514 357 24 0 0 chr20 25013158 25013200 -41654805 + (TG)n Simple_repeat Simple_repeat 2 43 0 308 203 0 0 chr20 25013433 25013497 -41654508 + MIR SINE MIR 102 165 -97 397 281 83 55 chr20 25013935 25014152 -41653853 + LTR16C LTR ERVL 77 299 -192 520 277 20 80 chr20 25014470 25014719 -41653286 - L2 LINE L2 -2 3311 3078 574 206 176 61 chr20 25014868 25015033 -41652972 + MER5A DNA MER1_type 1 184 -5 2328 69 0 17 chr20 25015199 25015487 -41652518 + AluSg SINE Alu 27 309 -1 331 327 39 19 chr20 25015521 25015677 -41652328 + HAL1 LINE L1 1494 1652 -855 304 191 35 78 chr20 25016172 25016287 -41651718 + L1M4c LINE L1 2367 2476 -3908 181 136 23 23 chr20 25017064 25017108 -41650897 + CT-rich Low_complexity Low_complexity 1 44 0 498 119 40 10 chr20 25017152 25017253 -41650752 + CT-rich Low_complexity Low_complexity 1 104 0 306 179 19 9 chr20 25018073 25018179 -41649826 + (TG)n Simple_repeat Simple_repeat 2 108 0 306 0 0 0 chr20 25022134 25022168 -41645837 + (TG)n Simple_repeat Simple_repeat 1 34 0 204 40 0 0 chr20 25022167 25022192 -41645813 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 210 37 0 0 chr20 25025746 25025773 -41642232 + (CAG)n Simple_repeat Simple_repeat 1 27 0 261 253 100 1 chr20 25026835 25027075 -41640930 - LTR16C LTR ERVL -9 482 190 3548 184 38 0 chr20 25027117 25027823 -41640182 + MER54A LTR ERVL 169 901 0 235 318 151 62 chr20 25028146 25028549 -41639456 - L2 LINE L2 0 3272 2834 182 250 111 28 chr20 25029566 25029638 -41638367 + MIR3 SINE MIR 114 191 -17 24 53 0 0 chr20 25030551 25030589 -41637416 + AT_rich Low_complexity Low_complexity 1 38 0 1353 241 64 5 chr20 25030635 25031012 -41636993 + MER97a DNA MER1_type? 486 884 -10 1374 176 104 31 chr20 25031102 25031391 -41636614 + AluJb SINE Alu 1 310 -2 361 269 35 60 chr20 25031393 25031594 -41636411 + MIR SINE MIR 33 228 -34 231 279 58 76 chr20 25031673 25031845 -41636160 + MIR SINE MIR 65 233 -29 463 249 71 0 chr20 25032890 25033045 -41634960 + MIR SINE MIR 56 228 -34 422 276 52 57 chr20 25035072 25035282 -41632723 + Charlie8 DNA MER1_type 3 211 -2206 1516 92 55 5 chr20 25035444 25035662 -41632343 - MER30 DNA MER1_type 0 230 2 381 315 56 0 chr20 25036071 25036233 -41631772 + MLT1L LTR MaLR 435 605 -10 192 321 107 27 chr20 25038105 25038217 -41629788 + L2 LINE L2 2600 2720 -594 2172 110 24 3 chr20 25038292 25038583 -41629422 - AluSx SINE Alu -15 297 1 2449 98 0 0 chr20 25038637 25038944 -41629061 - AluSc SINE Alu -1 308 2 245 373 95 8 chr20 25039209 25039322 -41628683 + L2 LINE L2 3122 3245 -27 283 364 18 9 chr20 25039322 25039432 -41628573 + MER5B DNA MER1_type 1 111 -67 264 59 0 0 chr20 25039433 25039467 -41628538 + (CA)n Simple_repeat Simple_repeat 1 34 0 217 341 37 0 chr20 25039925 25040007 -41627998 + L2 LINE L2 3149 3233 -39 2333 217 34 14 chr20 25040770 25041333 -41626672 + L1MD1 LINE L1 5669 6242 0 1026 236 14 0 chr20 25041753 25041973 -41626032 - MER58A DNA MER1_type 0 224 2 2435 93 3 3 chr20 25042615 25042951 -41625054 + AluSp SINE Alu 1 336 0 307 256 12 0 chr20 25043350 25043432 -41624573 - L1ME3A LINE L1 -60 6110 6028 418 234 156 18 chr20 25043511 25043678 -41624327 - L1ME3A LINE L1 -251 5913 5724 186 227 68 0 chr20 25044038 25044082 -41623923 - L2 LINE L2 -77 3195 3149 312 319 111 15 chr20 25045107 25045242 -41622763 - MIR SINE MIR -80 182 35 1015 246 109 43 chr20 25045537 25045932 -41622073 + MER63B DNA MER1_type 14 434 -2 414 331 26 13 chr20 25047906 25048057 -41619948 - MIR3 SINE MIR -9 199 47 203 103 26 0 chr20 25048057 25048096 -41619909 + (TG)n Simple_repeat Simple_repeat 1 40 0 249 282 42 0 chr20 25049765 25049836 -41618169 + MER5A DNA MER1_type 1 74 -115 2201 139 0 0 chr20 25049837 25050147 -41617858 + AluSx SINE Alu 1 310 -2 483 63 0 0 chr20 25050151 25050214 -41617791 + (GGAA)n Simple_repeat Simple_repeat 2 64 0 1529 223 94 21 chr20 25050226 25050661 -41617344 - MLT1C LTR MaLR 0 467 1 259 276 86 0 chr20 25050910 25051026 -41616979 - LTR16C LTR ERVL 0 491 366 1220 232 40 16 chr20 25051762 25052132 -41615873 - MLT1B LTR MaLR -4 386 8 213 295 84 42 chr20 25052140 25052306 -41615699 - MIR SINE MIR -57 205 33 269 332 55 59 chr20 25052618 25052820 -41615185 + L2 LINE L2 2865 3065 -248 224 333 29 0 chr20 25052845 25052914 -41615091 + L2 LINE L2 3201 3271 -42 251 323 94 31 chr20 25053721 25053848 -41614157 - MIR3 SINE MIR -65 143 9 2076 143 10 0 chr20 25054598 25054906 -41613099 - AluSx SINE Alu -1 311 1 362 299 90 30 chr20 25055642 25055776 -41612229 - MIR SINE MIR -65 143 19 337 333 10 0 chr20 25056089 25056191 -41611814 + MIR SINE MIR 6 108 -154 267 289 62 41 chr20 25056287 25056481 -41611524 - LTR16C LTR ERVL -39 452 255 328 271 24 0 chr20 25056701 25056786 -41611219 + MIR3 SINE MIR 83 169 -39 602 289 55 18 chr20 25058534 25058840 -41609165 - MLT1G1 LTR MaLR -283 272 2 305 300 0 0 chr20 25059028 25059108 -41608897 - MIR SINE MIR -106 156 77 207 278 67 33 chr20 25060597 25060687 -41607318 + L2 LINE L2 3178 3270 -2 202 307 120 0 chr20 25061972 25062047 -41605958 + MER5C DNA MER1_type 111 194 -130 228 291 13 0 chr20 25063092 25063171 -41604834 - MIR SINE MIR -64 144 65 728 231 94 0 chr20 25063928 25064140 -41603865 + L1ME1 LINE L1 5799 6030 -136 1704 162 62 14 chr20 25064210 25064659 -41603346 + LTR64 LTR ERVK 1 535 -23 286 293 12 0 chr20 25064891 25064973 -41603032 - MER58A DNA MER1_type -19 88 6 502 243 0 59 chr20 25066066 25066202 -41601803 - MER3 DNA MER1_type -81 128 1 306 274 21 0 chr20 25066309 25066404 -41601601 - MER20 DNA MER1_type 0 219 123 464 256 163 6 chr20 25068008 25068180 -41599825 - MIR SINE MIR -55 207 9 1749 189 3 3 chr20 25070953 25071265 -41596740 + AluJo SINE Alu 1 312 0 431 305 13 20 chr20 25072205 25072356 -41595649 + MIR SINE MIR 111 260 -2 4421 199 23 34 chr20 25073550 25073689 -41594316 + L1MB2 LINE L1 4335 4474 -1697 2348 50 43 3 chr20 25073689 25073971 -41594034 + AluY SINE Alu 1 293 -18 4421 199 23 34 chr20 25073971 25075684 -41592321 + L1MB2 LINE L1 4474 6167 -4 294 339 27 0 chr20 25076141 25076253 -41591752 - MIR SINE MIR -112 150 36 285 251 132 65 chr20 25076253 25076458 -41591547 - MLT1B LTR MaLR 0 555 331 1675 214 12 3 chr20 25077505 25077851 -41590154 + MER65C LTR ERV1 1 349 -112 371 260 24 47 chr20 25077818 25077945 -41590060 + LTR51 LTR ERV1 548 671 0 * 511 289 115 46 chr20 25079440 25079525 -41588480 - L1MC/D LINE L1 -803 5343 5265 1813 14 0 0 chr20 25079525 25079774 -41588231 + L1PA2 LINE L1 5934 6182 0 511 289 115 46 chr20 25079774 25080116 -41587889 - L1MC/D LINE L1 -881 5265 5006 602 274 149 4 chr20 25081681 25081936 -41586069 - L2 LINE L2 -3 3310 3019 322 258 79 0 chr20 25082642 25082731 -41585274 + HAL1b LINE L1 1249 1344 -4 265 303 0 0 chr20 25083336 25083402 -41584603 + GA-rich Low_complexity Low_complexity 3 68 0 476 236 6 0 chr20 25083427 25083584 -41584421 + (TG)n Simple_repeat Simple_repeat 1 158 0 188 309 48 24 chr20 25085659 25085743 -41582262 + L2 LINE L2 3185 3270 -2 210 356 11 11 chr20 25086512 25086599 -41581406 - MER5A DNA MER1_type -38 151 65 265 309 90 56 chr20 25087133 25087421 -41580584 + L1ME4a LINE L1 5813 6110 -11 342 297 36 14 chr20 25088088 25088226 -41579779 - L3 LINE CR1 -75 1502 1362 404 255 10 0 chr20 25088257 25088355 -41579650 - MER5A DNA MER1_type -87 102 4 330 26 0 0 chr20 25088456 25088495 -41579510 + (CA)n Simple_repeat Simple_repeat 2 40 0 237 275 50 0 chr20 25088498 25088578 -41579427 - L3 LINE CR1 -241 1336 1253 428 274 164 42 chr20 25091291 25091601 -41576404 - MLT1H1 LTR MaLR -8 547 200 1845 189 44 6 chr20 25093496 25093862 -41574143 - MLT1B LTR MaLR -10 380 1 608 215 16 0 chr20 25094262 25094383 -41573622 + FRAM SINE Alu 1 122 -54 1274 33 0 33 chr20 25094388 25094406 -41573599 + (GAAA)n Simple_repeat Simple_repeat 1 195 0 1274 33 0 33 chr20 25094406 25094590 -41573415 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 1031 272 24 20 chr20 25094828 25095126 -41572879 + LTR10D LTR ERV1 157 455 -58 791 131 17 26 chr20 25095133 25095364 -41572641 + GA-rich Low_complexity Low_complexity 1 229 0 1100 86 23 0 chr20 25095367 25095542 -41572463 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 2455 65 3 7 chr20 25097132 25097439 -41570566 - AluY SINE Alu -5 306 1 281 330 36 18 chr20 25097783 25097895 -41570110 + L2 LINE L2 3197 3310 -3 * 303 244 84 38 chr20 25097879 25098010 -41569995 + MIR SINE MIR 72 208 -54 661 147 37 0 chr20 25100454 25100563 -41567442 - 5S rRNA rRNA -1 120 8 197 260 104 52 chr20 25101406 25101483 -41566522 + L2 LINE L2 3192 3272 0 234 312 75 58 chr20 25101921 25102094 -41565911 + L2 LINE L2 3117 3292 -21 438 319 55 12 chr20 25103462 25103625 -41564380 - MER5B DNA MER1_type -8 170 1 2063 113 14 14 chr20 25104472 25104763 -41563242 - AluSq SINE Alu -22 291 1 2130 117 3 0 chr20 25106634 25106949 -41561056 + AluSx SINE Alu 1 316 0 802 246 144 11 chr20 25107165 25107442 -41560563 - L1ME1 LINE L1 -259 5905 5589 5463 49 0 3 chr20 25107618 25108277 -41559728 - L1PA5 LINE L1 -6 6148 5492 352 283 101 7 chr20 25108959 25109097 -41558908 - L1ME LINE L1 -334 5787 5637 266 366 33 13 chr20 25109121 25109274 -41558731 - MIR SINE MIR -63 199 44 1056 139 31 10 chr20 25110608 25110802 -41557203 + HSMAR2 DNA Mariner 5 202 -1100 9282 178 15 5 chr20 25110802 25111812 -41556193 - L1PB1 LINE L1 -8 6143 5144 1592 110 0 22 chr20 25111812 25112060 -41555945 - AluY SINE Alu 0 311 80 9282 178 15 5 chr20 25112060 25113970 -41554035 - L1PB1 LINE L1 -1007 5144 3191 556 224 27 14 chr20 25114098 25114245 -41553760 - MER51-int LTR ERV1 -2432 2583 2435 863 165 34 0 chr20 25114247 25114423 -41553582 - MER51-int LTR ERV1 -3693 4123 3942 * 3459 160 43 5 chr20 25114415 25115002 -41553003 - MER51-int LTR ERV1 -1936 6983 6375 1150 136 6 11 chr20 25115053 25115229 -41552776 - LTR9 LTR ERV1 0 612 438 6612 144 27 2 chr20 25115235 25116295 -41551710 + HSMAR2 DNA Mariner 214 1300 -2 1699 157 58 68 chr20 25116387 25116781 -41551224 - MLT1B LTR MaLR 0 390 1 1445 221 32 2 chr20 25116781 25117183 -41550822 + L1M4 LINE L1 4169 4582 -1564 701 297 51 20 chr20 25118042 25118335 -41549670 + LTR16A LTR ERVL 89 390 -60 195 294 7 98 chr20 25119442 25119585 -41548420 + L2 LINE L2 2921 3050 -222 8577 63 8 0 chr20 25120866 25122740 -41545265 - L1PA6 LINE L1 0 6154 4273 18947 124 11 13 chr20 25122740 25125641 -41542364 - L1PA6 LINE L1 -3242 2904 11 243 0 0 0 chr20 25125737 25125764 -41542241 + (TTTTG)n Simple_repeat Simple_repeat 5 31 0 182 289 221 0 chr20 25125884 25125988 -41542017 - MIR SINE MIR -116 146 20 1273 248 2 60 chr20 25126581 25126980 -41541025 - MLT1B LTR MaLR -7 383 8 353 235 5 43 chr20 25127811 25127998 -41540007 + (TG)n Simple_repeat Simple_repeat 1 180 0 364 141 22 49 chr20 25128010 25128195 -41539810 + (TG)n Simple_repeat Simple_repeat 1 180 0 468 153 31 25 chr20 25128229 25128763 -41539242 + (TG)n Simple_repeat Simple_repeat 1 537 0 855 281 102 19 chr20 25130348 25130722 -41537283 + MLT1I LTR MaLR 5 409 0 369 131 0 0 chr20 25130786 25130847 -41537158 + (TGGA)n Simple_repeat Simple_repeat 4 64 0 1193 255 89 25 chr20 25131732 25132136 -41535869 + MER74B LTR ERVL 136 565 -57 685 298 76 17 chr20 25132228 25132584 -41535421 + L1ME4a LINE L1 5490 5866 -255 262 214 87 10 chr20 25132673 25132776 -41535229 + L1ME4a LINE L1 6011 6121 0 5480 199 104 57 chr20 25134515 25134779 -41533226 + L1PA16 LINE L1 3985 4235 -1931 261 98 0 0 chr20 25134779 25134820 -41533185 + (CA)n Simple_repeat Simple_repeat 1 41 0 5480 199 104 57 chr20 25134820 25135967 -41532038 + L1PA16 LINE L1 4235 5327 -839 1947 141 3 16 chr20 25135967 25136271 -41531734 + AluSq SINE Alu 3 302 -11 5480 199 104 57 chr20 25136271 25136464 -41531541 + L1PA16 LINE L1 5327 5509 -657 285 29 0 0 chr20 25136464 25136498 -41531507 + (CA)n Simple_repeat Simple_repeat 2 35 0 5480 199 104 57 chr20 25136498 25136966 -41531039 + L1PA16 LINE L1 5509 6164 -2 2475 217 18 7 chr20 25136961 25137579 -41530426 + L1M4 LINE L1 4745 5369 -777 * 758 251 88 49 chr20 25137584 25137891 -41530114 - L1MEc LINE L1 -5826 570 252 838 204 71 5 chr20 25138000 25138138 -41529867 - L1MEc LINE L1 -6153 243 87 228 35 0 0 chr20 25138138 25138167 -41529838 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 838 204 71 5 chr20 25138167 25138224 -41529781 - L1MEc LINE L1 -6309 87 35 245 279 70 47 chr20 25138867 25138996 -41529009 - MIR3 SINE MIR -36 172 41 238 150 0 0 chr20 25139636 25139676 -41528329 + L1M4 LINE L1 2784 2823 -3323 278 78 78 0 chr20 25139946 25139997 -41528008 - L1MC2 LINE L1 -11 6333 6279 354 310 89 25 chr20 25141067 25141270 -41526735 + MIR SINE MIR 24 239 -23 315 151 161 167 chr20 25141861 25141886 -41526119 - L2 LINE L2 -6 3307 3283 2057 186 49 14 chr20 25141886 25142331 -41525674 + MER65C LTR ERV1 1 461 0 315 151 161 167 chr20 25142331 25142497 -41525508 - L2 LINE L2 -30 3283 3117 1166 203 65 76 chr20 25143468 25143941 -41524064 + LTR37B LTR ERV1 1 468 0 2050 189 76 57 chr20 25143984 25144604 -41523401 + MER92B LTR ERV1 4 635 -1 298 310 158 0 chr20 25144773 25144931 -41523074 + MER5A DNA MER1_type 7 189 0 213 314 57 16 chr20 25145646 25145770 -41522235 + MIR SINE MIR 22 150 -58 504 287 44 6 chr20 25145780 25145961 -41522044 - MER5A DNA MER1_type -1 188 1 204 167 37 37 chr20 25146060 25146114 -41521891 - MER5B DNA MER1_type -124 54 1 183 261 31 15 chr20 25146114 25146167 -41521838 + MIR3 SINE MIR 154 207 -1 483 303 27 5 chr20 25146290 25146475 -41521530 + MER5A DNA MER1_type 1 189 0 184 289 206 0 chr20 25146920 25147017 -41520988 + MER5B DNA MER1_type 55 171 -7 207 254 34 17 chr20 25147058 25147117 -41520888 + MIR SINE MIR 78 137 -71 215 314 25 8 chr20 25147239 25147357 -41520648 + MIR SINE MIR 143 262 0 281 325 26 32 chr20 25148269 25148423 -41519582 + MIR SINE MIR 20 172 -90 1720 211 20 9 chr20 25148432 25148773 -41519232 + MLT1A1 LTR MaLR 10 354 -11 4034 244 107 31 chr20 25148784 25150050 -41517955 + MLT1A1-int LTR MaLR 5 1366 -5 1822 194 19 8 chr20 25150063 25150424 -41517581 + MLT1A1 LTR MaLR 1 365 0 210 113 38 19 chr20 25152709 25152762 -41515243 + (TA)n Simple_repeat Simple_repeat 2 55 0 693 204 105 12 chr20 25152767 25152939 -41515066 - MER33 DNA MER1_type -136 188 1 412 173 51 64 chr20 25153017 25153173 -41514832 + L1M4 LINE L1 3690 3843 -2303 219 130 87 0 chr20 25153359 25153405 -41514600 + A-rich Low_complexity Low_complexity 2 51 0 246 303 53 20 chr20 25153760 25153912 -41514093 + L1 LINE L1 3692 3848 -2298 476 230 12 91 chr20 25153978 25154143 -41513862 + MLT1A1 LTR MaLR 2 153 -352 896 224 25 25 chr20 25154145 25154390 -41513615 + MLT1D LTR MaLR 261 505 0 782 173 6 22 chr20 25155767 25155925 -41512080 + MER2 DNA MER2_type 1 154 -162 355 204 191 57 chr20 25156083 25156240 -41511765 + MER5A DNA MER1_type 9 186 -3 293 290 153 16 chr20 25156486 25156610 -41511395 + MIR SINE MIR 72 212 -50 347 257 0 64 chr20 25156640 25156657 -41511348 + L1MC4 LINE L1 6602 6619 -1423 2409 105 30 8 chr20 25156657 25157019 -41510986 - L1PB1 LINE L1 0 6867 6498 347 257 0 64 chr20 25157019 25157110 -41510895 + L1MC4 LINE L1 6619 6703 -1339 14705 158 36 10 chr20 25157111 25162521 -41505484 - L1PB1 LINE L1 -360 6507 965 866 221 128 46 chr20 25162925 25163291 -41504714 - MSTD LTR MaLR 0 396 1 1557 149 166 3 chr20 25163808 25164115 -41503890 + MLT1B LTR MaLR 2 358 -32 1768 162 33 30 chr20 25164115 25164449 -41503556 + MER2 DNA MER2_type 1 335 -10 313 125 77 106 chr20 25165643 25165747 -41502258 + MIR SINE MIR 107 207 -55 260 313 125 18 chr20 25167348 25167460 -41500545 + MIR SINE MIR 103 226 -36 2001 129 26 7 chr20 25167497 25167800 -41500205 + MLT2A2 LTR ERVL 1 309 -144 2000 171 28 6 chr20 25167887 25168244 -41499761 + MLT1A1 LTR MaLR 1 365 0 355 263 179 45 chr20 25168343 25168567 -41499438 + Charlie7 DNA MER1_type 1 254 -2358 1756 229 123 48 chr20 25168712 25169597 -41498408 + Charlie7 DNA MER1_type 1618 2569 -43 232 336 8 42 chr20 25171628 25171747 -41496258 + LTR37B LTR ERV1 8 122 -346 1154 202 214 59 chr20 25171752 25172234 -41495771 + MLT1F1 LTR MaLR 1 650 -4 236 178 0 0 chr20 25172242 25172287 -41495718 + LTR37B LTR ERV1 154 198 -270 345 238 119 0 chr20 25172422 25172548 -41495457 + LTR37B LTR ERV1 328 468 0 1879 193 100 32 chr20 25173547 25173607 -41494398 - MLT1D LTR MaLR -8 497 443 2185 91 0 23 chr20 25173607 25173915 -41494090 + AluSq SINE Alu 1 301 -12 1879 193 100 32 chr20 25173915 25174295 -41493710 - MLT1D LTR MaLR -62 443 27 1324 242 60 11 chr20 25174408 25174755 -41493250 - MLT1H LTR MaLR -173 376 13 781 230 56 56 chr20 25175493 25175849 -41492156 - L1MC4 LINE L1 0 8042 7687 16732 125 33 3 chr20 25176920 25179568 -41488437 - L1P LINE L1 -1103 5043 2316 1614 164 8 0 chr20 25179568 25179830 -41488175 - MER50 LTR ERV1 -470 264 1 1978 134 7 0 chr20 25179845 25180144 -41487861 - AluSx SINE Alu -11 301 1 423 288 106 61 chr20 25180167 25180545 -41487460 + L1ME2 LINE L1 5470 5864 -300 * 759 164 93 0 chr20 25180540 25180700 -41487305 + L1MB3 LINE L1 5959 6143 -36 1346 176 10 67 chr20 25180806 25181118 -41486887 - AluJb SINE Alu -18 294 1 1340 224 94 0 chr20 25181980 25182288 -41485717 - MER58B DNA MER1_type -4 337 1 286 308 94 0 chr20 25182566 25182683 -41485322 - MIR SINE MIR -125 137 10 4269 6 2 0 chr20 25182719 25183190 -41484815 - L1PA2 LINE L1 -176 5979 5508 1513 6 0 0 chr20 25183190 25183356 -41484649 + L1PA2 LINE L1 5980 6146 -9 2517 154 14 49 chr20 25183356 25183843 -41484162 + MER101 LTR ERV1 5 474 0 672 176 0 0 chr20 25185067 25185362 -41482643 + (TG)n Simple_repeat Simple_repeat 1 295 0 425 256 23 23 chr20 25185362 25185534 -41482471 + LTR16C LTR ERVL 272 443 -48 218 268 0 0 chr20 25186099 25186155 -41481850 - MIR SINE MIR -114 148 93 441 301 39 39 chr20 25187771 25187977 -41480028 - L1ME4a LINE L1 -11 6110 5905 532 288 76 25 chr20 25188124 25188424 -41479581 - L1M3 LINE L1 -463 5717 5397 22 0 0 0 chr20 25188604 25188626 -41479379 + AT_rich Low_complexity Low_complexity 1 22 0 763 131 12 88 chr20 25188679 25188839 -41479166 - MER65A LTR ERV1 0 445 298 299 311 24 53 chr20 25189827 25189901 -41478104 - L1ME4a LINE L1 -387 5734 5659 1957 144 3 3 chr20 25189901 25190213 -41477792 - AluSx SINE Alu 0 312 1 299 311 24 53 chr20 25190213 25190382 -41477623 - L1ME4a LINE L1 -462 5659 5493 2313 64 3 0 chr20 25190432 25190727 -41477278 - AluY SINE Alu -15 296 1 261 222 83 65 chr20 25191374 25191482 -41476523 + L2 LINE L2 3197 3306 -7 1512 179 3 13 chr20 25192038 25192339 -41475666 + AluJb SINE Alu 14 311 -1 223 348 11 0 chr20 25192600 25192692 -41475313 + L3 LINE CR1 696 788 -789 278 301 41 0 chr20 25192700 25192773 -41475232 - L3 LINE CR1 -88 1489 1414 1202 176 65 29 chr20 25192840 25193118 -41474887 - L1MA9 LINE L1 -22 6290 6003 180 289 184 0 chr20 25193175 25193251 -41474754 - MER5B DNA MER1_type -15 163 74 1292 223 144 3 chr20 25193258 25193634 -41474371 + MER63B DNA MER1_type 1 429 -7 1020 141 0 0 chr20 25194145 25194322 -41473683 + (GGGA)n Simple_repeat Simple_repeat 4 180 0 295 269 96 58 chr20 25194425 25194581 -41473424 - MIR SINE MIR -45 217 56 319 274 26 26 chr20 25194802 25194915 -41473090 + MLT1F1 LTR MaLR 35 147 -420 348 152 0 0 chr20 25195091 25195157 -41472848 + (TG)n Simple_repeat Simple_repeat 1 66 0 1308 212 71 33 chr20 25195890 25196258 -41471747 - MLT1C LTR MaLR 0 467 86 241 273 93 70 chr20 25197216 25197388 -41470617 - MIR SINE MIR -69 193 18 400 240 257 0 chr20 25198341 25198520 -41469485 + HAL1 LINE L1 1312 1536 -971 808 131 0 148 chr20 25198545 25198748 -41469257 + AluSg/x SINE Alu 134 310 0 1790 266 82 11 chr20 25198750 25198802 -41469203 + HAL1 LINE L1 1548 1595 -912 1900 182 45 8 chr20 25198802 25199154 -41468851 - MLT1A1 LTR MaLR 0 365 1 1790 266 82 11 chr20 25199154 25199724 -41468281 + HAL1 LINE L1 1595 2214 -293 270 194 0 0 chr20 25199738 25199800 -41468205 + (TG)n Simple_repeat Simple_repeat 1 62 0 421 278 26 64 chr20 25200347 25200613 -41467392 + HAL1 LINE L1 2241 2496 -11 23 33 0 0 chr20 25200928 25200958 -41467047 + AT_rich Low_complexity Low_complexity 1 30 0 248 271 0 0 chr20 25200961 25201020 -41466985 - MIR SINE MIR 0 262 204 207 0 0 0 chr20 25201020 25201043 -41466962 + (T)n Simple_repeat Simple_repeat 1 23 0 8084 8 0 0 chr20 25201688 25203037 -41464968 - L1PA2 LINE L1 0 6155 4806 209 329 24 0 chr20 25203059 25203141 -41464864 - MIR SINE MIR -77 185 102 1752 192 24 55 chr20 25203447 25203676 -41464329 - MLT1B LTR MaLR -21 369 155 1815 107 0 0 chr20 25203676 25203928 -41464077 - AluSx SINE Alu 0 312 61 1752 192 24 55 chr20 25203928 25204079 -41463926 - MLT1B LTR MaLR -235 155 1 565 262 49 0 chr20 25204991 25205155 -41462850 + MER5A DNA MER1_type 10 181 -8 2056 119 20 7 chr20 25205347 25205649 -41462356 - AluSx SINE Alu -6 306 1 235 253 44 55 chr20 25205964 25206055 -41461950 + MER5B DNA MER1_type 1 90 -88 422 242 8 47 chr20 25206121 25206249 -41461756 - LTR16C LTR ERVL -2 489 367 401 226 16 24 chr20 25206473 25206597 -41461408 + GA-rich Low_complexity Low_complexity 4 126 0 530 29 0 14 chr20 25207590 25207659 -41460346 + (GGATG)n Simple_repeat Simple_repeat 2 69 0 357 319 38 38 chr20 25208249 25208434 -41459571 - L2 LINE L2 -1 3312 3128 2221 169 97 13 chr20 25208438 25208904 -41459101 - LTR22 LTR ERVK -4 505 1 356 138 15 0 chr20 25209109 25209174 -41458831 - MER41B LTR ERV1 -88 547 482 591 282 29 0 chr20 25210590 25210760 -41457245 + MER34B-int LTR ERV1 6100 6274 -57 669 245 58 68 chr20 25210800 25211340 -41456665 + MER34B LTR ERV1 1 551 -14 263 218 182 47 chr20 25212753 25212900 -41455105 - MIR SINE MIR -68 194 32 206 273 78 13 chr20 25213018 25213095 -41454910 + MIR SINE MIR 61 142 -66 240 269 0 0 chr20 25213480 25213532 -41454473 - MER5A DNA MER1_type -129 60 9 24 0 0 0 chr20 25214199 25214223 -41453782 + AT_rich Low_complexity Low_complexity 1 24 0 379 294 20 0 chr20 25214850 25214952 -41453053 - MIR SINE MIR -106 156 53 283 175 18 0 chr20 25215387 25215431 -41452574 - MLT2B2 LTR ERVL 0 515 471 11324 118 50 19 chr20 25215431 25216648 -41451357 + Tigger1 DNA MER2_type 1 1300 -1118 252 0 0 0 chr20 25216648 25216676 -41451329 + (CA)n Simple_repeat Simple_repeat 1 28 0 11324 118 50 19 chr20 25216676 25217363 -41450642 + Tigger1 DNA MER2_type 1300 1964 -454 378 247 48 14 chr20 25217406 25217552 -41450453 - L1MC4 LINE L1 0 8042 7892 301 253 0 0 chr20 25217593 25217668 -41450337 - L1MC4 LINE L1 -126 7916 7842 583 199 0 8 chr20 25217670 25217801 -41450204 - Tigger1 DNA MER2_type -522 1896 1767 336 233 135 38 chr20 25217803 25217936 -41450069 - L1ME4a LINE L1 -33 6088 5943 3127 113 9 0 chr20 25217975 25218437 -41449568 + Tigger1 DNA MER2_type 1952 2417 -1 1345 219 120 81 chr20 25218449 25218906 -41449099 - MLT2B2 LTR ERVL -40 475 1 285 246 0 46 chr20 25218907 25218923 -41449082 + L2 LINE L2 3209 3224 -89 1773 169 68 0 chr20 25218923 25219249 -41448756 + MER7A DNA MER2_type 1 346 0 285 246 0 46 chr20 25219249 25219297 -41448708 + L2 LINE L2 3224 3270 -43 23 0 0 0 chr20 25220381 25220404 -41447601 + AT_rich Low_complexity Low_complexity 1 23 0 204 40 0 0 chr20 25220512 25220537 -41447468 + (TTAA)n Simple_repeat Simple_repeat 1 25 0 216 97 0 0 chr20 25220562 25220593 -41447412 + (TTTTG)n Simple_repeat Simple_repeat 5 35 0 1771 179 26 7 chr20 25220653 25220955 -41447050 + AluJo SINE Alu 1 308 -4 558 134 0 12 chr20 25220957 25221060 -41446945 - AluSg/x SINE Alu 0 305 204 31 0 0 0 chr20 25221060 25221091 -41446914 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr20 25221450 25221475 -41446530 + AT_rich Low_complexity Low_complexity 1 25 0 561 252 7 37 chr20 25221486 25221621 -41446384 + FLAM_C SINE Alu 3 133 0 498 71 94 0 chr20 25221765 25221905 -41446100 + GA-rich Low_complexity Low_complexity 1 153 0 370 292 90 6 chr20 25222149 25222327 -41445678 - LTR16C LTR ERVL 0 491 299 184 235 0 59 chr20 25223238 25223289 -41444716 + L2 LINE L2 589 636 -2678 6495 86 8 1 chr20 25223445 25224875 -41443130 - L1PA11 LINE L1 0 6174 4739 1753 143 3 19 chr20 25224879 25225187 -41442818 - L1PA11 LINE L1 -1355 4791 4489 836 154 7 27 chr20 25225687 25225836 -41442169 + FRAM SINE Alu 31 176 0 248 229 48 38 chr20 25225867 25225972 -41442033 - MLT1K LTR MaLR -2 586 481 296 254 36 9 chr20 25227089 25227199 -41440806 - LTR16A1 LTR ERVL -2 455 367 2201 120 0 0 chr20 25228339 25228680 -41439325 - AluSx SINE Alu 0 341 1 243 200 70 113 chr20 25228860 25228975 -41439030 - MLT1I LTR MaLR -13 396 287 599 222 0 6 chr20 25230949 25231129 -41436876 + (CA)n Simple_repeat Simple_repeat 2 180 0 744 198 92 0 chr20 25231352 25231569 -41436436 + Charlie5 DNA MER1_type 2349 2585 -27 231 282 12 0 chr20 25231670 25231755 -41436250 + MER58B DNA MER1_type 247 332 -9 1728 47 0 0 chr20 25231755 25231966 -41436039 + L1PA4 LINE L1 5942 6152 -3 1382 153 59 81 chr20 25231984 25232133 -41435872 + AluJo SINE Alu 1 141 -171 1919 152 14 10 chr20 25232133 25232429 -41435576 + AluJb SINE Alu 1 297 -15 1382 153 59 81 chr20 25232429 25232586 -41435419 + AluJo SINE Alu 141 300 -12 525 288 160 23 chr20 25233889 25234711 -41433294 + L2 LINE L2 2293 3310 -3 1251 188 58 0 chr20 25235405 25235645 -41432360 - MER54B LTR ERVL -26 767 514 2182 129 0 10 chr20 25235753 25236064 -41431941 + AluSp SINE Alu 1 308 -5 264 247 0 0 chr20 25237358 25237443 -41430562 + (CA)n Simple_repeat Simple_repeat 2 86 0 251 350 10 19 chr20 25238781 25238884 -41429121 + MIR SINE MIR 51 152 -110 935 128 39 28 chr20 25239557 25239736 -41428269 + MLT1C LTR MaLR 1 181 -286 1624 99 13 9 chr20 25239747 25239980 -41428025 - LTR9 LTR ERV1 -86 526 293 3538 160 16 10 chr20 25239986 25240592 -41427413 - HUERS-P3 LTR ERV1 -8295 624 15 1198 101 6 22 chr20 25240607 25240785 -41427220 - LTR9 LTR ERV1 0 612 438 1087 177 63 11 chr20 25240786 25241057 -41426948 + MLT1C LTR MaLR 171 455 -12 633 290 29 24 chr20 25241093 25241385 -41426620 - MLT1H1 LTR MaLR -266 264 10 942 198 0 0 chr20 25241686 25241843 -41426162 + AluJb SINE Alu 136 292 -20 516 89 0 0 chr20 25242931 25243010 -41424995 + (TC)n Simple_repeat Simple_repeat 1 79 0 2282 127 0 0 chr20 25243402 25243845 -41424160 - AluSx SINE Alu 0 443 1 7588 31 2 0 chr20 25245980 25247577 -41420428 + L1PA4 LINE L1 4608 6206 0 994 211 79 13 chr20 25247577 25248094 -41419911 + MER92B LTR ERV1 38 633 -3 507 184 6 38 chr20 25248777 25248935 -41419070 + C-rich Low_complexity Low_complexity 5 157 0 307 249 24 6 chr20 25248902 25249067 -41418938 + CT-rich Low_complexity Low_complexity 1 168 0 * 666 226 168 10 chr20 25249079 25249378 -41418627 + MLT1G LTR MaLR 163 583 -7 227 280 112 16 chr20 25250411 25250536 -41417469 + L2 LINE L2 2188 2324 -990 391 277 123 104 chr20 25250954 25251332 -41416673 + L2 LINE L2 2807 3198 -115 210 91 0 0 chr20 25251332 25251365 -41416640 + (TG)n Simple_repeat Simple_repeat 2 34 0 391 277 123 104 chr20 25251365 25251484 -41416521 + L2 LINE L2 3198 3313 0 259 406 71 18 chr20 25252254 25252424 -41415581 - L2 LINE L2 -1 3271 3093 343 225 9 99 chr20 25253428 25253539 -41414466 - L1MC4 LINE L1 -1328 6714 6614 1679 192 51 0 chr20 25253590 25253882 -41414123 - AluJo SINE Alu -3 309 3 549 274 214 29 chr20 25254017 25254166 -41413839 - MLT1H LTR MaLR 0 549 429 189 0 0 0 chr20 25254166 25254187 -41413818 + (GGCTG)n Simple_repeat Simple_repeat 5 25 0 549 274 214 29 chr20 25254187 25254453 -41413552 - MLT1H LTR MaLR -120 429 57 275 283 0 30 chr20 25255437 25255536 -41412469 - LTR67 LTR ERVL -5 552 457 808 207 53 0 chr20 25256687 25256856 -41411149 - MER45A DNA AcHobo 0 178 1 2149 148 0 0 chr20 25257628 25257939 -41410066 - AluSq SINE Alu -2 311 1 198 0 0 0 chr20 25257940 25257962 -41410043 + (T)n Simple_repeat Simple_repeat 1 22 0 881 208 42 9 chr20 25259298 25259510 -41408495 - MER20 DNA MER1_type 0 219 1 2056 137 7 7 chr20 25259592 25259899 -41408106 - AluSx SINE Alu -5 307 1 788 307 69 26 chr20 25260038 25260220 -41407785 - L2 LINE L2 -2 3311 3138 4198 156 89 7 chr20 25260220 25260983 -41407022 - LTR1B LTR ERV1 0 826 1 788 307 69 26 chr20 25260983 25261444 -41406561 - L2 LINE L2 -175 3138 2638 1182 271 124 31 chr20 25261465 25261918 -41406087 - MLT1J LTR MaLR -13 498 4 180 282 14 0 chr20 25261920 25261991 -41406014 - L2 LINE L2 -686 2628 2557 232 180 40 0 chr20 25261996 25262046 -41405959 + LTR56 LTR ERV1 9 60 -385 4807 117 10 18 chr20 25262046 25262833 -41405172 + L1PB3 LINE L1 5373 6153 -1 22 0 0 0 chr20 25262833 25262855 -41405150 + AT_rich Low_complexity Low_complexity 1 22 0 449 113 31 82 chr20 25262857 25262954 -41405051 + L1MC1 LINE L1 6241 6332 -1 200 79 53 0 chr20 25262960 25262998 -41405007 + A-rich Low_complexity Low_complexity 1 40 0 1983 139 25 42 chr20 25263003 25263405 -41404600 + LTR56 LTR ERV1 51 445 0 424 241 27 0 chr20 25263422 25263534 -41404471 - L2 LINE L2 -740 2574 2460 1639 213 121 11 chr20 25263545 25263991 -41404014 - MLT1D LTR MaLR -4 501 7 702 302 92 23 chr20 25264000 25264391 -41403614 - L2 LINE L2 -866 2448 2031 434 313 8 0 chr20 25264706 25264834 -41403171 - MER5B DNA MER1_type -32 146 18 1054 250 77 81 chr20 25264946 25265109 -41402896 + L1ME2 LINE L1 5500 5662 -502 1963 117 3 24 chr20 25265109 25265400 -41402605 + AluSq SINE Alu 6 290 -23 1054 250 77 81 chr20 25265400 25265704 -41402301 + L1ME2 LINE L1 5662 5965 -199 618 256 119 0 chr20 25265728 25265888 -41402117 + MLT1J LTR MaLR 17 195 -316 551 285 84 4 chr20 25266489 25266738 -41401267 + LTR16A LTR ERVL 57 325 -125 2152 121 0 0 chr20 25266935 25267248 -41400757 + AluSx SINE Alu 3 315 0 827 301 18 4 chr20 25268038 25268267 -41399738 - MLT2E LTR ERVL -339 289 58 322 272 25 0 chr20 25268412 25268493 -41399512 + MIR SINE MIR 102 184 -78 1686 203 42 22 chr20 25269774 25270351 -41397654 + MLT2B1 LTR ERVL 1 474 -46 33 85 0 0 chr20 25270355 25270437 -41397568 + AT_rich Low_complexity Low_complexity 1 82 0 312 107 20 0 chr20 25270456 25270512 -41397493 + MLT2B2 LTR ERVL 403 510 -5 261 287 49 63 chr20 25270834 25270977 -41397028 + MER5A DNA MER1_type 49 189 0 396 278 115 19 chr20 25271136 25271345 -41396660 - LTR16A1 LTR ERVL -1 456 228 231 228 89 0 chr20 25271367 25271446 -41396559 - LTR16A1 LTR ERVL -360 97 12 2277 128 7 0 chr20 25273223 25273528 -41394477 - AluSx SINE Alu -5 307 1 257 209 30 0 chr20 25273531 25273598 -41394407 + LTR16C LTR ERVL 363 431 -60 220 255 0 0 chr20 25274351 25274398 -41393607 + MIR SINE MIR 56 102 -160 506 204 171 17 chr20 25274651 25274832 -41393173 + LTR16A LTR ERVL 237 445 -5 435 149 0 0 chr20 25274913 25274987 -41393018 + (CAG)n Simple_repeat Simple_repeat 2 75 0 2341 82 0 0 chr20 25275490 25275771 -41392234 + AluSq SINE Alu 1 281 -32 180 77 0 0 chr20 25275771 25275797 -41392208 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 243 0 0 0 chr20 25275798 25275825 -41392180 + (TAAAA)n Simple_repeat Simple_repeat 4 30 0 1843 132 74 15 chr20 25275926 25276444 -41391561 + MER51A LTR ERV1 1 625 -9 349 201 201 95 chr20 25277105 25277284 -41390721 - MLT1G1 LTR MaLR -188 407 210 232 182 23 0 chr20 25277291 25277335 -41390670 + GA-rich Low_complexity Low_complexity 1 45 0 421 223 54 39 chr20 25277393 25277523 -41390482 - MLT1G1 LTR MaLR -462 133 2 395 185 12 12 chr20 25277608 25277689 -41390316 - MIR SINE MIR -151 111 31 448 272 117 93 chr20 25277779 25278103 -41389902 + HAL1 LINE L1 1016 1347 -1160 770 306 95 3 chr20 25278688 25279015 -41388990 - MLT1J LTR MaLR -123 388 32 329 261 8 30 chr20 25279226 25279360 -41388645 + HAL1 LINE L1 2261 2391 -116 23 0 0 0 chr20 25279466 25279489 -41388516 + AT_rich Low_complexity Low_complexity 1 23 0 2315 114 3 0 chr20 25280376 25280682 -41387323 + AluSx SINE Alu 1 307 -5 449 259 142 6 chr20 25280800 25280962 -41387043 + MER5A DNA MER1_type 1 184 -5 740 276 142 3 chr20 25281119 25281442 -41386563 - LTR16C LTR ERVL -17 474 107 184 120 0 80 chr20 25282320 25282370 -41385635 - MIR3 SINE MIR -154 54 9 3349 184 66 10 chr20 25282752 25283068 -41384937 - L1MB5 LINE L1 -9 6165 5868 1584 208 13 3 chr20 25283068 25283366 -41384639 - AluJo SINE Alu -11 301 1 3349 184 66 10 chr20 25283366 25283760 -41384245 - L1MB5 LINE L1 -306 5868 5415 661 240 142 43 chr20 25284275 25284529 -41383476 + LTR16C LTR ERVL 213 491 0 2247 105 17 3 chr20 25285174 25285470 -41382535 - AluSg SINE Alu -10 300 1 633 202 8 0 chr20 25285631 25285750 -41382255 - MLT1G1 LTR MaLR -15 580 461 338 349 80 11 chr20 25285835 25286099 -41381906 - MLT1G1 LTR MaLR -313 282 1 344 326 0 0 chr20 25286132 25286224 -41381781 + (TG)n Simple_repeat Simple_repeat 2 93 0 211 202 3 0 chr20 25286866 25286912 -41381093 - MIR SINE MIR -53 155 108 500 345 11 0 chr20 25287517 25287694 -41380311 - MIR SINE MIR -8 254 76 289 315 192 14 chr20 25287738 25288014 -41379991 - MLT1K LTR MaLR -39 549 225 1416 204 25 26 chr20 25288111 25288550 -41379455 + LTR2B LTR ERV1 1 490 0 291 269 0 0 chr20 25288663 25288730 -41379275 - L2 LINE L2 -5 3308 3242 215 275 53 61 chr20 25288922 25289053 -41378952 + MIR SINE MIR 120 249 -13 303 302 22 36 chr20 25291431 25291553 -41376452 + MIR SINE MIR 99 220 -42 1688 144 30 26 chr20 25291553 25291892 -41376113 - MER2 DNA MER2_type -4 340 1 303 302 22 36 chr20 25291892 25291908 -41376097 + MIR SINE MIR 220 235 -27 298 223 0 87 chr20 25292830 25292933 -41375072 + MER2 DNA MER2_type 1 94 -251 2199 110 7 0 chr20 25292936 25293226 -41374779 + AluSx SINE Alu 1 292 -20 254 263 53 0 chr20 25294518 25294594 -41373411 + MER5B DNA MER1_type 3 82 -96 441 0 0 0 chr20 25294607 25294656 -41373349 + (TG)n Simple_repeat Simple_repeat 1 49 0 958 128 0 8 chr20 25294683 25294816 -41373189 - AluSg/x SINE Alu -53 259 128 526 302 132 29 chr20 25295432 25295780 -41372225 + MLT1J LTR MaLR 124 507 -4 1621 81 0 0 chr20 25296939 25297137 -41370868 + AluSg/x SINE Alu 80 277 -33 185 0 40 0 chr20 25297137 25297162 -41370843 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 452 251 98 14 chr20 25298118 25298333 -41369672 - L1ME4a LINE L1 -206 5915 5683 3240 187 38 34 chr20 25298497 25299234 -41368771 - MER49 LTR ERV1 0 923 184 2072 107 3 31 chr20 25299320 25299474 -41368531 - AluSx SINE Alu -30 282 138 2186 129 0 0 chr20 25299474 25299768 -41368237 - AluSx SINE Alu -18 294 1 2072 107 3 31 chr20 25299768 25299903 -41368102 - AluSx SINE Alu -174 138 1 264 95 0 0 chr20 25300041 25300083 -41367922 - L2 LINE L2 0 3313 3272 2916 178 80 8 chr20 25300098 25300760 -41367245 - MER67C LTR ERV1 0 710 1 635 245 204 0 chr20 25300789 25301058 -41366947 - MER110A LTR ERV1 -1 467 144 22 35 0 0 chr20 25301679 25301708 -41366297 + GC_rich Low_complexity Low_complexity 1 29 0 193 200 0 0 chr20 25303187 25303222 -41364783 + MIR SINE MIR 126 160 -102 219 200 117 0 chr20 25303298 25303358 -41364647 - MIR SINE MIR -122 140 74 288 154 0 0 chr20 25304872 25304924 -41363081 + GA-rich Low_complexity Low_complexity 1 52 0 334 346 99 9 chr20 25306927 25307259 -41360746 + L1ME4a LINE L1 5584 5945 -176 3180 135 38 0 chr20 25312775 25313250 -41354755 - MER1A DNA MER1_type 0 529 37 1637 167 0 43 chr20 25317627 25317926 -41350079 + AluJb SINE Alu 1 286 -26 2241 105 0 0 chr20 25318023 25318340 -41349665 - AluSq SINE Alu 0 317 1 25 0 0 0 chr20 25318389 25318414 -41349591 + AT_rich Low_complexity Low_complexity 1 25 0 2350 93 3 0 chr20 25318414 25318714 -41349291 - AluSc SINE Alu -8 301 1 2192 118 0 7 chr20 25320119 25320423 -41347582 - AluSx SINE Alu -10 302 1 777 153 34 17 chr20 25320493 25320611 -41347394 - 5S rRNA rRNA -1 120 1 6901 200 143 60 chr20 25321111 25322471 -41345534 + L1MDa LINE L1 1 1248 -5292 2183 124 0 7 chr20 25322471 25322778 -41345227 + AluSx SINE Alu 1 305 -7 6901 200 143 60 chr20 25322778 25323035 -41344970 + L1MDa LINE L1 1248 1482 -5058 586 149 0 23 chr20 25323035 25323122 -41344883 + AluS SINE Alu 3 87 -226 6901 200 143 60 chr20 25323122 25323614 -41344391 + L1MDa LINE L1 1482 1932 -4608 1349 219 4 8 chr20 25323614 25323851 -41344154 - MER8 DNA MER2_type -3 236 1 6901 200 143 60 chr20 25323851 25323875 -41344130 + L1MDa LINE L1 1932 2405 -4135 817 161 0 0 chr20 25323878 25324002 -41344003 + AluJb SINE Alu 1 124 -188 1432 154 36 24 chr20 25324003 25324250 -41343755 + AluJb SINE Alu 63 312 0 1508 194 62 13 chr20 25324250 25324436 -41343569 + L1MDa LINE L1 2431 2607 -3933 2115 135 3 0 chr20 25324436 25324739 -41343266 + AluSx SINE Alu 1 304 -8 1508 194 62 13 chr20 25324739 25325074 -41342931 + L1MDa LINE L1 2607 2987 -3553 1021 159 0 6 chr20 25325077 25325341 -41342664 + AluSx SINE Alu 2 310 0 369 62 0 0 chr20 25325341 25325389 -41342616 + (GA)n Simple_repeat Simple_repeat 1 48 0 1067 217 119 31 chr20 25325390 25325944 -41342061 + L1MDa LINE L1 2975 3577 -2963 1003 198 44 0 chr20 25325948 25326175 -41341830 + L1MDa LINE L1 3937 4173 -2367 1464 247 20 14 chr20 25326175 25326519 -41341486 + MER77 LTR ERV1 254 599 -6 743 166 20 7 chr20 25326531 25326682 -41341323 + L1MDa LINE L1 4185 4337 -2203 263 75 50 0 chr20 25326667 25326707 -41341298 + L1MDa LINE L1 4271 4312 -2228 * 3003 208 19 23 chr20 25326716 25327412 -41340593 + L1MB7 LINE L1 3873 4565 -1581 2026 203 100 15 chr20 25327412 25327841 -41340164 + MLT2B1 LTR ERVL 1 475 -45 288 91 0 0 chr20 25327841 25327885 -41340120 + (CA)n Simple_repeat Simple_repeat 2 45 0 2026 203 100 15 chr20 25327885 25327927 -41340078 + MLT2B1 LTR ERVL 475 512 -8 3950 191 58 14 chr20 25327932 25329471 -41338534 + L1MB7 LINE L1 4563 6168 -16 487 312 36 53 chr20 25330035 25330372 -41337633 + MLT1J1 LTR MaLR 15 345 -101 2041 97 22 7 chr20 25330631 25330936 -41337069 + AluSq SINE Alu 1 309 0 1298 208 78 11 chr20 25331154 25331438 -41336567 - MER58B DNA MER1_type 0 341 39 463 313 20 13 chr20 25331664 25331814 -41336191 - L2 LINE L2 -1 3271 3121 1529 193 4 14 chr20 25331983 25332258 -41335747 + AluJo SINE Alu 1 272 -40 962 159 0 37 chr20 25332258 25332421 -41335584 - AluJb SINE Alu -155 157 1 947 253 116 90 chr20 25333096 25334179 -41333826 - L2 LINE L2 0 3313 2187 617 286 124 8 chr20 25337288 25337529 -41330476 + MER46C DNA MER2_type 20 288 -50 1474 102 46 141 chr20 25337970 25338157 -41329848 - AluJo SINE Alu -14 298 150 2163 108 0 14 chr20 25338157 25338453 -41329552 + AluSx SINE Alu 1 292 -20 1474 102 46 141 chr20 25338453 25338570 -41329435 - AluJo SINE Alu -162 150 23 215 211 19 39 chr20 25338697 25338749 -41329256 + MIR SINE MIR 23 73 -189 1751 221 19 11 chr20 25338817 25339179 -41328826 + MLT1A1 LTR MaLR 1 365 0 1938 114 18 0 chr20 25339839 25340111 -41327894 + AluSg SINE Alu 1 277 -33 847 271 65 60 chr20 25340371 25340785 -41327220 - L2 LINE L2 0 3313 2898 210 300 158 33 chr20 25340830 25340877 -41327128 - L2 LINE L2 -586 2728 2688 970 53 76 38 chr20 25340877 25341009 -41326996 - MER85 DNA T2_type -1 138 2 210 300 158 33 chr20 25341009 25341081 -41326924 - L2 LINE L2 -626 2688 2594 1944 128 3 3 chr20 25341197 25341530 -41326475 + AluSx SINE Alu 1 333 0 485 259 168 22 chr20 25342734 25342919 -41325086 - MIR SINE MIR -3 259 48 2305 102 0 0 chr20 25342919 25343214 -41324791 + AluSq SINE Alu 1 295 -18 310 288 71 29 chr20 25343573 25343743 -41324262 - L3 LINE CR1 -70 1507 1331 472 327 42 14 chr20 25344053 25344289 -41323716 + MIR SINE MIR 23 261 -1 1315 191 103 131 chr20 25344369 25344619 -41323386 + L1MB8 LINE L1 5417 5672 -506 1518 120 127 40 chr20 25344619 25344895 -41323110 + AluSx SINE Alu 1 300 -12 1315 191 103 131 chr20 25344895 25345038 -41322967 + L1MB8 LINE L1 5672 5817 -361 2061 112 7 7 chr20 25345038 25345334 -41322671 + AluSx SINE Alu 1 296 -16 1315 191 103 131 chr20 25345334 25345513 -41322492 + L1MB8 LINE L1 5817 5966 -212 1360 182 97 57 chr20 25345513 25345864 -41322141 + MLT1A1 LTR MaLR 1 365 0 1315 191 103 131 chr20 25345864 25346062 -41321943 + L1MB8 LINE L1 5966 6168 -10 321 339 85 26 chr20 25346494 25346683 -41321322 - MIR SINE MIR -20 242 43 969 170 6 0 chr20 25348334 25348505 -41319500 + L1MA6 LINE L1 6124 6295 -5 1927 121 39 0 chr20 25350016 25350298 -41317707 + L1PA16 LINE L1 5869 6161 -5 538 301 61 27 chr20 25350757 25351053 -41316952 + HAL1b LINE L1 219 524 -824 250 218 3 3 chr20 25351846 25351905 -41316100 - MLT1I LTR MaLR -270 139 83 407 336 103 13 chr20 25351958 25352336 -41315669 + L1M4 LINE L1 2300 2711 -3435 1908 114 23 0 chr20 25352338 25352600 -41315405 + AluSx SINE Alu 27 294 -18 783 142 8 24 chr20 25352612 25352739 -41315266 + FLAM_C SINE Alu 2 126 -7 1090 324 141 23 chr20 25352922 25353490 -41314515 + L1M4 LINE L1 2932 3566 -2580 463 313 124 34 chr20 25353496 25353639 -41314366 + L1M4 LINE L1 3596 3725 -2421 1722 180 3 0 chr20 25353639 25353950 -41314055 + AluJb SINE Alu 1 312 0 463 313 124 34 chr20 25353950 25354186 -41313819 + L1M4 LINE L1 3725 4009 -2137 30 45 0 0 chr20 25354519 25354563 -41313442 + AT_rich Low_complexity Low_complexity 1 44 0 427 242 39 33 chr20 25354706 25354859 -41313146 + HAL1 LINE L1 2249 2402 -105 2200 106 0 0 chr20 25354913 25355206 -41312799 + AluSg SINE Alu 2 294 -16 1639 168 3 16 chr20 25355279 25355588 -41312417 + AluJo SINE Alu 2 306 -6 231 294 87 22 chr20 25355692 25355784 -41312221 - L2 LINE L2 0 3313 3216 33 56 0 0 chr20 25356162 25356216 -41311789 + AT_rich Low_complexity Low_complexity 1 54 0 2317 86 0 0 chr20 25356679 25356982 -41311023 - AluSx SINE Alu -9 303 1 2079 89 0 36 chr20 25358254 25358557 -41309448 + AluSg SINE Alu 1 292 -18 577 269 66 6 chr20 25358692 25358859 -41309146 - MIR SINE MIR -41 221 45 21 0 0 0 chr20 25360135 25360156 -41307849 + GC_rich Low_complexity Low_complexity 1 21 0 183 240 90 80 chr20 25362408 25362508 -41305497 - MER5B DNA MER1_type -40 138 38 786 212 7 0 chr20 25362945 25363091 -41304914 - MER3 DNA MER1_type 0 209 63 1859 101 3 85 chr20 25363169 25363485 -41304520 + AluSx SINE Alu 9 298 -14 311 211 18 0 chr20 25363488 25363545 -41304460 + MER34 LTR ERV1 66 123 -419 2427 157 19 19 chr20 25363567 25363582 -41304423 + MER34 LTR ERV1 98 112 -430 2285 70 37 0 chr20 25363582 25363880 -41304125 - AluY SINE Alu -2 309 1 2427 157 19 19 chr20 25363880 25364279 -41303726 + MER34 LTR ERV1 111 512 -30 282 189 104 21 chr20 25364723 25364834 -41303171 - MLT1H LTR MaLR -374 175 14 439 90 0 0 chr20 25365634 25365701 -41302304 - AluJo SINE Alu -1 311 245 44208 28 21 1 chr20 25365707 25371739 -41296266 + L1HS LINE L1 2 6155 0 28 0 0 0 chr20 25371800 25371828 -41296177 + AT_rich Low_complexity Low_complexity 1 28 0 1350 183 0 20 chr20 25371828 25372074 -41295931 - AluJo SINE Alu -71 241 1 23 0 0 0 chr20 25372176 25372199 -41295806 + AT_rich Low_complexity Low_complexity 1 23 0 1024 216 20 112 chr20 25372797 25372999 -41295006 - MER82 DNA MER2_type 0 653 485 1680 146 0 0 chr20 25372999 25373267 -41294738 - AluSx SINE Alu -1 311 44 1024 216 20 112 chr20 25373267 25373360 -41294645 - MER82 DNA MER2_type -168 485 385 762 154 17 0 chr20 25373362 25373479 -41294526 - FLAM_C SINE Alu -16 127 9 1939 211 21 10 chr20 25373491 25373880 -41294125 - MER82 DNA MER2_type -260 393 1 464 296 28 51 chr20 25374020 25374067 -41293938 + LTR33 LTR ERVL 2 49 -472 2059 182 124 19 chr20 25374067 25374534 -41293471 + MLT2B1 LTR ERVL 1 516 -4 464 296 28 51 chr20 25374534 25374702 -41293303 + LTR33 LTR ERVL 49 212 -309 481 259 0 0 chr20 25374912 25375047 -41292958 + L1M4 LINE L1 3622 3756 -2390 * 528 240 201 10 chr20 25375046 25375359 -41292646 + L1M4 LINE L1 4968 5340 -806 216 0 0 0 chr20 25376151 25376175 -41291830 + (A)n Simple_repeat Simple_repeat 1 24 0 1772 149 16 7 chr20 25376694 25377003 -41291002 - AluJb SINE Alu 0 312 1 553 244 26 0 chr20 25377003 25377140 -41290865 - L1MA10 LINE L1 -34 6130 5990 1468 124 4 13 chr20 25377362 25377596 -41290409 - AluJb SINE Alu -41 271 40 340 270 126 29 chr20 25378330 25378505 -41289500 - MIR3 SINE MIR -63 145 7 1037 228 13 0 chr20 25378546 25378778 -41289227 - L1MD3 LINE L1 -15 7980 7746 2178 113 3 0 chr20 25378780 25379091 -41288914 - AluSx SINE Alu 0 312 1 2185 103 0 7 chr20 25380355 25380657 -41287348 - AluSq SINE Alu -13 300 1 1715 187 42 6 chr20 25381050 25381382 -41286623 + MER2 DNA MER2_type 1 344 0 200 255 63 33 chr20 25381882 25382059 -41285946 + MIR SINE MIR 38 262 0 264 299 0 0 chr20 25382705 25382772 -41285233 - MIR SINE MIR -90 172 106 27 29 0 0 chr20 25382879 25382913 -41285092 + AT_rich Low_complexity Low_complexity 1 34 0 424 316 117 12 chr20 25382936 25383107 -41284898 - MIR SINE MIR -72 190 2 423 277 17 11 chr20 25384553 25384778 -41283227 + (CA)n Simple_repeat Simple_repeat 1 226 0 1520 164 3 84 chr20 25384818 25385153 -41282852 - AluJb SINE Alu 0 312 5 2152 204 44 48 chr20 25385341 25385844 -41282161 - MER68 LTR ERV1 0 562 60 2232 97 0 7 chr20 25385844 25386154 -41281851 - AluSc SINE Alu -1 308 1 2152 204 44 48 chr20 25386154 25386214 -41281791 - MER68 LTR ERV1 -502 60 1 324 291 91 0 chr20 25386631 25386741 -41281264 - MIR SINE MIR -17 245 126 910 223 104 73 chr20 25386745 25387055 -41280950 - L1ME3A LINE L1 -181 5989 5663 2186 86 36 10 chr20 25387055 25387359 -41280646 - AluSq SINE Alu -1 312 1 910 223 104 73 chr20 25387359 25387433 -41280572 - L1ME3A LINE L1 -507 5663 5593 218 32 32 0 chr20 25387619 25387650 -41280355 + (TTA)n Simple_repeat Simple_repeat 2 33 0 762 142 24 0 chr20 25387650 25387777 -41280228 - L1PB1 LINE L1 -10 6141 6012 376 269 0 0 chr20 25387974 25388067 -41279938 + L1MD2 LINE L1 6035 6127 -232 428 238 21 28 chr20 25388073 25388216 -41279789 + L1MD3 LINE L1 7835 7976 -19 481 263 44 22 chr20 25388410 25388547 -41279458 - MIR SINE MIR -2 260 121 422 208 190 69 chr20 25388752 25388968 -41279037 + LTR16C LTR ERVL 12 253 -238 330 87 0 0 chr20 25388988 25389034 -41278971 + (TG)n Simple_repeat Simple_repeat 2 47 0 276 299 17 43 chr20 25389072 25389189 -41278816 + MLT1K LTR MaLR 253 366 -222 591 206 9 9 chr20 25390521 25390745 -41277260 + (TCCA)n Simple_repeat Simple_repeat 1 224 0 704 257 40 36 chr20 25391780 25392002 -41276003 - MER58A DNA MER1_type -1 223 1 271 214 16 0 chr20 25393478 25393604 -41274401 + (CA)n Simple_repeat Simple_repeat 2 129 0 357 220 11 6 chr20 25393649 25393826 -41274179 + (CA)n Simple_repeat Simple_repeat 2 179 0 470 181 13 9 chr20 25393856 25394089 -41273916 + (CA)n Simple_repeat Simple_repeat 1 234 0 645 258 117 83 chr20 25394433 25394828 -41273177 + MLT1J LTR MaLR 45 452 -59 185 274 20 0 chr20 25394919 25394970 -41273035 + MIR SINE MIR 211 262 0 1686 180 132 41 chr20 25396212 25396673 -41271332 - MLT1D LTR MaLR 0 505 3 261 139 0 0 chr20 25397131 25397174 -41270831 + (TA)n Simple_repeat Simple_repeat 1 43 0 744 99 0 0 chr20 25397183 25397284 -41270721 - HY3 scRNA scRNA 0 101 1 216 372 35 0 chr20 25398619 25398732 -41269273 + L2 LINE L2 2948 3064 -208 692 269 96 10 chr20 25398865 25399073 -41268932 + MIR SINE MIR 37 262 0 198 103 0 0 chr20 25399144 25399173 -41268832 + (CA)n Simple_repeat Simple_repeat 1 29 0 268 198 244 0 chr20 25399277 25399363 -41268642 + L2 LINE L2 3206 3312 -1 366 173 17 0 chr20 25400130 25400202 -41267803 - MER4B LTR ERV1 -9 655 527 321 102 20 0 chr20 25400202 25400251 -41267754 - MER4C LTR ERV1 -114 351 302 1145 143 122 13 chr20 25400375 25400605 -41267400 + MER4A LTR ERV1 1 255 -409 2333 107 34 11 chr20 25400626 25400981 -41267024 + Tigger1 DNA MER2_type 2055 2417 -1 1035 197 79 52 chr20 25400984 25401441 -41266564 - L1MC/D LINE L1 -649 5987 5515 * 6227 127 15 3 chr20 25401427 25403272 -41264733 - L1PA13 LINE L1 -8 6155 4291 751 203 129 42 chr20 25403332 25403618 -41264387 - L1MC/D LINE L1 -1034 5506 5196 453 123 93 11 chr20 25403777 25403885 -41264120 - L1MEc LINE L1 -3918 2640 2504 2934 158 16 6 chr20 25404614 25405122 -41262883 - L1MB3 LINE L1 -2 6181 5669 348 207 9 78 chr20 25405752 25405868 -41262137 + L1MDa LINE L1 1857 1992 -4576 347 235 0 68 chr20 25405971 25406103 -41261902 + L1MDa LINE L1 3289 3411 -3129 3659 117 0 4 chr20 25406523 25407036 -41260969 + MER9 LTR ERVK 1 511 0 47515 65 10 1 chr20 25407036 25407741 -41260264 + HERVK9 LTR ERVK 1 698 -5218 687 134 17 25 chr20 25407741 25407860 -41260145 + L1PA8 LINE L1 6049 6166 -6 207 0 0 0 chr20 25407869 25407892 -41260113 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 47515 65 10 1 chr20 25407892 25413025 -41254980 + HERVK9 LTR ERVK 705 5907 -9 1890 159 24 0 chr20 25413125 25413420 -41254585 + AluSx SINE Alu 1 302 -10 346 231 19 39 chr20 25413447 25413551 -41254454 + L1MEc LINE L1 2156 2257 -4139 990 234 102 75 chr20 25413569 25413968 -41254037 + L1MEc LINE L1 2218 2605 -3610 181 0 0 65 chr20 25413968 25413999 -41254006 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 990 234 102 75 chr20 25413999 25414034 -41253971 + L1MEc LINE L1 2605 2638 -3577 2112 142 30 0 chr20 25414034 25414337 -41253668 + AluSx SINE Alu 1 312 0 990 234 102 75 chr20 25414337 25414677 -41253328 + L1MEc LINE L1 2638 3014 -3201 326 267 17 33 chr20 25415937 25416117 -41251888 + (TG)n Simple_repeat Simple_repeat 2 178 0 374 225 37 9 chr20 25416166 25416496 -41251509 + (TG)n Simple_repeat Simple_repeat 1 339 0 451 329 64 7 chr20 25416805 25417100 -41250905 - L1ME3A LINE L1 -93 6077 5766 7811 17 1 0 chr20 25417358 25418237 -41249768 - L1PA3 LINE L1 -2 6153 5274 697 141 7 7 chr20 25419717 25419859 -41248146 + (TCCA)n Simple_repeat Simple_repeat 1 142 0 297 163 125 0 chr20 25422277 25422357 -41245648 + MER5C DNA MER1_type 233 322 -2 831 190 92 31 chr20 25422765 25422960 -41245045 - MLT1E1 LTR MaLR 0 654 448 683 268 16 0 chr20 25422960 25423143 -41244862 - L1ME3A LINE L1 -1308 4838 4653 1018 244 26 19 chr20 25423198 25423464 -41244541 - MLT1E1 LTR MaLR -386 268 1 1902 174 34 92 chr20 25424289 25424534 -41243471 + MLT1D LTR MaLR 58 263 -242 2370 189 36 40 chr20 25424534 25425054 -41242951 - MLT2B1 LTR ERVL 0 520 3 1902 174 34 92 chr20 25425054 25425284 -41242721 + MLT1D LTR MaLR 263 505 0 6398 99 8 3 chr20 25425358 25427282 -41240723 - L1PA14 LINE L1 -3 6158 4233 2503 166 34 4 chr20 25427282 25427747 -41240258 + L1MA9 LINE L1 5828 6310 -2 195 162 0 0 chr20 25428063 25428100 -41239905 + (TG)n Simple_repeat Simple_repeat 1 37 0 342 269 170 7 chr20 25428615 25428756 -41239249 + MER5A DNA MER1_type 10 173 -16 490 245 92 18 chr20 25428779 25428942 -41239063 - MER5B DNA MER1_type 0 178 4 261 305 72 40 chr20 25428971 25429194 -41238811 + L1MB2 LINE L1 5576 5805 -2003 319 58 0 159 chr20 25429549 25429618 -41238387 - MLT2A1 LTR ERVL 0 453 396 620 38 71 28 chr20 25429641 25429857 -41238148 + (TA)n Simple_repeat Simple_repeat 1 225 0 521 87 74 0 chr20 25429875 25430109 -41237896 + (TA)n Simple_repeat Simple_repeat 1 251 0 2925 82 22 12 chr20 25430109 25430510 -41237495 - MLT2A1 LTR ERVL -39 405 1 195 195 0 0 chr20 25431692 25431733 -41236272 - MIR SINE MIR -44 218 178 240 236 38 85 chr20 25431944 25432050 -41235955 - L2 LINE L2 -9 3304 3204 277 254 15 100 chr20 25433059 25433189 -41234816 - L2 LINE L2 0 3272 3154 501 262 146 6 chr20 25433406 25433542 -41234463 - MER5A DNA MER1_type -2 187 23 186 43 0 0 chr20 25433542 25433565 -41234440 + (CTG)n Simple_repeat Simple_repeat 1 23 0 501 262 146 6 chr20 25433565 25433592 -41234413 - MER5A DNA MER1_type -166 23 1 204 125 0 0 chr20 25434237 25434269 -41233736 + (TCCA)n Simple_repeat Simple_repeat 4 35 0 3977 127 35 9 chr20 25434421 25435058 -41232947 - L1PA15 LINE L1 -17 6148 5496 210 71 0 0 chr20 25435363 25435391 -41232614 + (T)n Simple_repeat Simple_repeat 1 28 0 7526 104 4 19 chr20 25435836 25436909 -41231096 - MER11C LTR ERVK -14 1057 1 2014 139 83 3 chr20 25437139 25437476 -41230529 - THE1B LTR MaLR 0 364 1 336 127 0 0 chr20 25437576 25437631 -41230374 + (TG)n Simple_repeat Simple_repeat 2 56 0 202 143 29 0 chr20 25437631 25437666 -41230339 + GA-rich Low_complexity Low_complexity 2 37 0 692 172 119 0 chr20 25437751 25437902 -41230103 + L1MB2 LINE L1 6001 6169 -2 30 0 0 0 chr20 25438841 25438871 -41229134 + AT_rich Low_complexity Low_complexity 1 30 0 1045 193 83 90 chr20 25439426 25439861 -41228144 - MSTB1 LTR MaLR 0 432 1 683 256 90 72 chr20 25440495 25440940 -41227065 + LTR37B LTR ERV1 6 458 -10 2696 177 62 10 chr20 25441943 25442462 -41225543 + LTR64 LTR ERVK 1 546 -12 355 252 305 9 chr20 25443311 25443652 -41224353 - L2 LINE L2 -1111 2203 1762 1255 223 46 64 chr20 25443652 25444105 -41223900 + LTR56 LTR ERV1 1 445 0 2438 91 0 0 chr20 25444735 25445042 -41222963 - AluY SINE Alu -4 307 1 431 250 176 0 chr20 25445324 25445472 -41222533 + MER5A DNA MER1_type 16 189 0 21 36 0 0 chr20 25446237 25446265 -41221740 + AT_rich Low_complexity Low_complexity 1 28 0 268 219 14 14 chr20 25446806 25446879 -41221126 + (TA)n Simple_repeat Simple_repeat 2 74 0 476 273 123 55 chr20 25446938 25447186 -41220819 + LTR33 LTR ERVL 58 348 -173 1166 224 89 63 chr20 25447186 25447678 -41220327 + MLT1D LTR MaLR 1 505 0 476 273 123 55 chr20 25447678 25447851 -41220154 + LTR33 LTR ERVL 348 508 -13 267 54 0 0 chr20 25450625 25450662 -41217343 + (CAAT)n Simple_repeat Simple_repeat 2 38 0 531 198 11 82 chr20 25451166 25451348 -41216657 - MLT1D LTR MaLR -229 276 108 1839 188 20 0 chr20 25452667 25453008 -41214997 + MER7A DNA MER2_type 1 346 0 338 143 16 0 chr20 25453097 25453160 -41214845 + CT-rich Low_complexity Low_complexity 1 64 0 886 129 0 14 chr20 25453843 25453982 -41214023 + LTR7 LTR ERV1 1 137 -313 883 141 13 19 chr20 25454240 25454396 -41213609 + LTR7 LTR ERV1 296 450 0 766 167 0 0 chr20 25455283 25455403 -41212602 + FLAM_C SINE Alu 2 121 -22 303 28 0 0 chr20 25455403 25455439 -41212566 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 466 254 96 72 chr20 25455443 25455893 -41212112 - L1MC/D LINE L1 -2053 5755 5291 1986 86 89 0 chr20 25455893 25456162 -41211843 + AluSp SINE Alu 2 294 -19 466 254 96 72 chr20 25456162 25456200 -41211805 - L1MC/D LINE L1 -2517 5291 5255 3063 210 23 30 chr20 25456235 25456972 -41211033 + L1MB8 LINE L1 5447 6178 0 1143 173 62 159 chr20 25459940 25460310 -41207695 - MER21B LTR ERV1 -528 335 2 5349 130 39 16 chr20 25460752 25461063 -41206942 - MER4D LTR ERV1 0 903 601 1923 134 7 14 chr20 25461063 25461376 -41206629 + AluSp SINE Alu 1 311 0 5349 130 39 16 chr20 25461376 25461946 -41206059 - MER4D LTR ERV1 -302 601 1 1086 268 149 57 chr20 25462294 25462809 -41205196 + L1MC4 LINE L1 7095 7682 -360 2995 208 23 54 chr20 25462809 25463554 -41204451 - MER72 LTR ERV1 0 722 1 1086 268 149 57 chr20 25463554 25463684 -41204321 + L1MC4 LINE L1 7682 7799 -243 345 167 45 0 chr20 25464751 25464817 -41203188 + MER58B DNA MER1_type 256 324 -17 1000 176 21 34 chr20 25464860 25465099 -41202906 - L1MA9 LINE L1 -6 6306 6071 452 207 20 14 chr20 25465253 25465384 -41202621 - MIR SINE MIR -35 173 46 1477 158 61 65 chr20 25465386 25465696 -41202309 + AluJo SINE Alu 1 309 -3 2116 103 0 50 chr20 25465979 25466299 -41201706 - AluY SINE Alu -7 304 1 966 226 24 9 chr20 25466356 25466568 -41201437 + MER20 DNA MER1_type 1 215 -4 267 287 191 43 chr20 25466865 25466982 -41201023 - L1MC/D LINE L1 -2008 5800 5702 1985 190 72 71 chr20 25466982 25467534 -41200471 + MLT2B3 LTR ERVL 1 553 -1 267 287 191 43 chr20 25467534 25467719 -41200286 - L1MC/D LINE L1 -2106 5702 5453 322 306 47 66 chr20 25467805 25467904 -41200101 - L1MC/D LINE L1 -811 5335 5236 3215 76 20 20 chr20 25467904 25468352 -41199653 - LTR7 LTR ERV1 -2 448 1 322 306 47 66 chr20 25468352 25468510 -41199495 - L1MC/D LINE L1 -910 5236 5083 1882 151 98 64 chr20 25468551 25468988 -41199017 - LTR10A LTR ERV1 -61 548 97 375 296 7 7 chr20 25469612 25469747 -41198258 - L1ME3 LINE L1 -213 5949 5815 1075 234 29 4 chr20 25469785 25470058 -41197947 - L1MA9 LINE L1 -38 6274 5995 431 141 0 39 chr20 25470075 25470153 -41197852 + L1MA9 LINE L1 5867 5941 -371 397 321 15 0 chr20 25470159 25470290 -41197715 - L1ME3 LINE L1 -342 5828 5696 14417 137 22 33 chr20 25470292 25472735 -41195270 - Tigger1 DNA MER2_type 0 2418 1 243 147 0 0 chr20 25472762 25472796 -41195209 - L1M3 LINE L1 -530 5653 5620 478 186 182 49 chr20 25472812 25473022 -41194983 - MLT1E1 LTR MaLR -361 293 1 23 0 0 0 chr20 25473062 25473085 -41194920 + AT_rich Low_complexity Low_complexity 1 23 0 3623 195 159 20 chr20 25474048 25475066 -41192939 - MER52A LTR ERV1 0 1278 1 204 184 0 0 chr20 25475072 25475121 -41192884 + (CA)n Simple_repeat Simple_repeat 2 50 0 257 288 0 14 chr20 25475190 25475263 -41192742 - MLT1G LTR MaLR -195 395 324 578 257 9 0 chr20 25475320 25475433 -41192572 + MER81 DNA DNA 1 114 0 251 213 288 0 chr20 25475435 25475515 -41192490 - MLT1G LTR MaLR -317 273 171 3446 118 14 10 chr20 25475729 25476239 -41191766 - MER41E LTR ERV1 0 512 1 24 53 0 0 chr20 25476586 25476624 -41191381 + AT_rich Low_complexity Low_complexity 1 38 0 2253 120 0 0 chr20 25477093 25477392 -41190613 + AluSx SINE Alu 1 299 -13 38 51 0 0 chr20 25477588 25477647 -41190358 + AT_rich Low_complexity Low_complexity 1 59 0 3160 201 82 36 chr20 25477647 25478442 -41189563 - L1MA9 LINE L1 -30 6282 5452 316 271 65 9 chr20 25478730 25478837 -41189168 - LTR33 LTR ERVL -332 189 77 249 246 31 0 chr20 25478890 25478955 -41189050 - LTR33 LTR ERVL -379 142 76 245 170 0 0 chr20 25479179 25479226 -41188779 - LTR33 LTR ERVL -399 122 76 403 304 36 0 chr20 25479238 25479376 -41188629 - LTR33 LTR ERVL -378 143 1 21 36 0 0 chr20 25479818 25479846 -41188159 + AT_rich Low_complexity Low_complexity 1 28 0 525 322 110 20 chr20 25479863 25480354 -41187651 - L1ME4a LINE L1 -30 6091 5557 201 237 0 0 chr20 25481923 25481982 -41186023 + (TG)n Simple_repeat Simple_repeat 1 59 0 1045 269 168 27 chr20 25481994 25482469 -41185536 - MLT1F LTR MaLR 0 542 1 740 291 165 6 chr20 25482734 25483085 -41184920 + LTR16C LTR ERVL 79 485 -6 1583 209 9 12 chr20 25483175 25483514 -41184491 - MER4D LTR ERV1 -2 901 564 766 179 13 19 chr20 25483517 25483694 -41184311 - MER4E LTR ERV1 -588 284 1 1000 177 172 35 chr20 25484465 25484663 -41183342 + MSTD LTR MaLR 141 396 0 527 215 164 18 chr20 25486287 25486506 -41181499 - LTR16C LTR ERVL -9 482 232 691 291 9 26 chr20 25486567 25486794 -41181211 + MER58A DNA MER1_type 2 224 0 228 172 0 0 chr20 25489538 25489596 -41178409 + CT-rich Low_complexity Low_complexity 2 59 0 244 315 33 0 chr20 25490596 25490688 -41177317 - LTR16C LTR ERVL -18 473 379 426 138 64 11 chr20 25492657 25492751 -41175254 - L1MB2 LINE L1 -3 6168 6070 1780 161 0 22 chr20 25493327 25493638 -41174367 + AluJo SINE Alu 1 304 -8 4227 123 55 20 chr20 25493672 25494385 -41173620 - L1PA16 LINE L1 0 6166 5429 * 10871 186 7 8 chr20 25494381 25497253 -41170752 - L1PA15 LINE L1 -2 6163 3281 4768 222 13 4 chr20 25497261 25498417 -41169588 - L1PA15 LINE L1 -2983 3163 1998 4360 257 104 27 chr20 25498404 25499478 -41168527 - L1 LINE L1 -3052 4054 3064 * 2594 74 0 0 chr20 25499478 25499787 -41168218 - AluY SINE Alu -2 309 1 4360 257 104 27 chr20 25499787 25499999 -41168006 - L1 LINE L1 -4042 3064 2870 1947 152 39 36 chr20 25499999 25500335 -41167670 + MER1B DNA MER1_type 1 337 0 4360 257 104 27 chr20 25500335 25500531 -41167474 - L1 LINE L1 -4236 2870 2690 1191 112 0 0 chr20 25500531 25500710 -41167295 + (TTCC)n Simple_repeat Simple_repeat 2 180 0 4360 257 104 27 chr20 25500710 25500738 -41167267 - L1 LINE L1 -4416 2690 2666 1821 121 67 20 chr20 25500738 25501036 -41166969 - AluSq SINE Alu -1 312 1 258 200 0 36 chr20 25500990 25501045 -41166960 - AluSg/x SINE Alu -121 181 129 * 4360 257 104 27 chr20 25501036 25503524 -41164481 - L1 LINE L1 -4440 2666 1 229 100 80 60 chr20 25505021 25505071 -41162934 - LTR35 LTR ERV1 -41 577 527 2030 123 0 14 chr20 25506202 25506510 -41161495 + AluSg SINE Alu 1 304 0 2265 107 3 3 chr20 25506826 25507126 -41160879 + AluSg SINE Alu 1 300 -10 1945 120 20 20 chr20 25509610 25509909 -41158096 - AluSx SINE Alu -13 299 1 468 290 30 0 chr20 25510349 25510480 -41157525 + L1M4 LINE L1 655 789 -5753 742 237 22 13 chr20 25510529 25510753 -41157252 + L1M4 LINE L1 883 1108 -5434 * 11960 201 35 36 chr20 25510752 25513606 -41154399 - L1 LINE L1 -963 6602 3745 2448 100 0 0 chr20 25513606 25513916 -41154089 - AluY SINE Alu -1 310 1 11960 201 35 36 chr20 25513916 25515090 -41152915 - L1 LINE L1 -3820 3745 2572 13419 192 59 66 chr20 25515100 25519973 -41148032 - L1PB1 LINE L1 -3 6864 2054 3138 130 2 4 chr20 25519973 25520456 -41147549 - L1PB1 LINE L1 -8 6143 5662 13419 192 59 66 chr20 25520456 25522490 -41145515 - L1PB1 LINE L1 -4813 2054 6 1912 109 0 0 chr20 25522585 25522850 -41145155 - L1PA8 LINE L1 0 6172 5908 695 209 16 16 chr20 25522862 25523044 -41144961 - L1M4 LINE L1 -846 5300 5119 248 315 63 0 chr20 25524360 25524503 -41143502 - MER112 DNA MER1_type -99 161 10 740 282 13 26 chr20 25526697 25526924 -41141081 - MER58A DNA MER1_type 0 224 1 594 239 115 21 chr20 25527131 25527374 -41140631 + LTR16C LTR ERVL 225 490 -1 43947 29 25 1 chr20 25528907 25534910 -41133095 + L1PA2 LINE L1 8 6155 0 340 263 114 70 chr20 25535213 25535441 -41132564 - MER57A LTR ERV1 0 403 166 486 277 58 29 chr20 25535459 25535665 -41132340 - MER93a LTR ERV1 -190 212 1 1491 329 45 30 chr20 25535669 25536536 -41131469 - MER31-int LTR ERV1 -425 7112 6233 1077 248 62 99 chr20 25536951 25537973 -41130032 - MER31-int LTR ERV1 -780 6199 2143 525 259 35 15 chr20 25537963 25538164 -41129841 - MER31-int LTR ERV1 -1987 2949 2745 * 201 171 0 0 chr20 25538164 25538199 -41129806 + A-rich Low_complexity Low_complexity 1 35 0 910 254 74 74 chr20 25538200 25538964 -41129041 - MER31-int LTR ERV1 -1698 3182 2371 420 274 19 17 chr20 25539500 25539706 -41128299 - MER57A LTR ERV1 0 403 198 446 271 26 13 chr20 25539757 25539912 -41128093 - MER5A DNA MER1_type -11 178 22 467 301 85 20 chr20 25539915 25540114 -41127891 - MER93a LTR ERV1 -190 212 1 241 279 27 18 chr20 25540599 25540710 -41127295 + MER5A DNA MER1_type 10 121 -68 746 260 32 9 chr20 25541191 25541410 -41126595 + MER58A DNA MER1_type 1 224 0 183 250 21 0 chr20 25544037 25544085 -41123920 - L2 LINE L2 -502 2812 2764 477 115 0 0 chr20 25544757 25544844 -41123161 + (TC)n Simple_repeat Simple_repeat 2 88 0 458 292 24 12 chr20 25546541 25546709 -41121296 - MER5A DNA MER1_type -11 178 9 558 152 0 11 chr20 25549097 25549189 -41118816 - AluJo SINE Alu -178 134 44 259 197 30 15 chr20 25549218 25549284 -41118721 - MLT1J LTR MaLR -22 489 423 884 135 0 8 chr20 25549874 25550007 -41117998 - FLAM_C SINE Alu -4 139 8 285 392 38 12 chr20 25551001 25551241 -41116764 + MIR SINE MIR 13 258 -4 27 29 0 0 chr20 25552853 25552887 -41115118 + AT_rich Low_complexity Low_complexity 1 34 0 252 86 0 0 chr20 25553365 25553400 -41114605 + (CA)n Simple_repeat Simple_repeat 1 35 0 288 306 67 60 chr20 25553704 25553838 -41114167 - MER5B DNA MER1_type 0 178 44 3147 142 45 7 chr20 25554378 25554935 -41113070 - L1MB3 LINE L1 -11 6172 5595 38018 90 12 11 chr20 25554936 25561066 -41106939 - L1PA6 LINE L1 -8 6146 10 1520 195 84 18 chr20 25561074 25561505 -41106500 - L1MB3 LINE L1 -569 5614 5149 684 132 30 1 chr20 25561513 25561631 -41106374 + MSTA LTR MaLR 1 121 -311 4826 84 29 13 chr20 25561631 25562313 -41105692 - L1PA10 LINE L1 -5 6163 5471 309 316 71 19 chr20 25562435 25562590 -41105415 + MLT1J LTR MaLR 17 179 -332 1594 200 85 3 chr20 25562852 25563182 -41104823 + MLT2C1 LTR ERVL 1 357 -40 240 133 0 0 chr20 25563173 25563218 -41104787 - LTR66 LTR ERVL -172 438 394 * 185 204 31 10 chr20 25563235 25563333 -41104672 + (TA)n Simple_repeat Simple_repeat 2 101 0 292 111 0 173 chr20 25563344 25563425 -41104580 + MLT2C1 LTR ERVL 454 520 0 1970 148 43 32 chr20 25563425 25563796 -41104209 - THE1C LTR MaLR 0 375 1 1510 143 4 8 chr20 25563998 25564257 -41103748 + L1MA4A LINE L1 5866 6123 -180 486 183 0 11 chr20 25564260 25564353 -41103652 + L1MA4A LINE L1 6189 6280 -23 1030 53 26 0 chr20 25564382 25564534 -41103471 + (GAAA)n Simple_repeat Simple_repeat 3 158 0 621 263 104 15 chr20 25564885 25565144 -41102861 - LTR43 LTR ERV1 -124 478 197 339 263 12 0 chr20 25565946 25566026 -41101979 - LTR64 LTR ERVK -477 81 1 679 200 30 0 chr20 25566026 25566161 -41101844 - MER5A DNA MER1_type -43 146 8 3115 188 65 43 chr20 25566612 25567489 -41100516 - L1MB8 LINE L1 0 6178 5282 505 188 62 12 chr20 25567540 25567700 -41100305 - L1MB8 LINE L1 -825 5321 5154 819 188 50 12 chr20 25568324 25568484 -41099521 - FRAM SINE Alu -11 165 1 434 293 77 75 chr20 25568493 25568869 -41099136 - MLT1K LTR MaLR -172 416 40 213 283 151 26 chr20 25569714 25569866 -41098139 - MER5B DNA MER1_type 0 178 8 1156 171 182 4 chr20 25570900 25571224 -41096781 + LTR47A LTR ERVL 17 452 0 398 346 6 0 chr20 25574579 25574758 -41093247 + (CA)n Simple_repeat Simple_repeat 1 180 0 225 0 0 0 chr20 25574781 25574806 -41093199 + (CA)n Simple_repeat Simple_repeat 1 25 0 199 335 18 49 chr20 25575567 25575731 -41092274 + MIR3 SINE MIR 17 175 -33 607 278 56 56 chr20 25576458 25576782 -41091223 + L1MC4 LINE L1 7719 8042 0 310 305 36 18 chr20 25577601 25577768 -41090237 + (CCCCG)n Simple_repeat Simple_repeat 3 172 0 370 174 12 43 chr20 25577780 25577941 -41090064 + C-rich Low_complexity Low_complexity 3 158 0 223 326 6 34 chr20 25577954 25578132 -41089873 + C-rich Low_complexity Low_complexity 5 177 0 * 251 299 23 40 chr20 25578103 25578277 -41089728 + CT-rich Low_complexity Low_complexity 1 171 0 * 394 318 6 17 chr20 25578162 25578341 -41089664 + C-rich Low_complexity Low_complexity 1 177 0 985 235 76 17 chr20 25578782 25579084 -41088921 - MER33 DNA MER1_type -4 320 1 224 248 161 13 chr20 25579214 25579363 -41088642 - L2 LINE L2 -296 3017 2847 253 272 145 61 chr20 25579578 25579806 -41088199 - L1ME2 LINE L1 -11 6153 5907 984 213 25 33 chr20 25582315 25582559 -41085446 + MER31B LTR ERV1 225 466 0 314 293 18 84 chr20 25582745 25582970 -41085035 - L1MC4 LINE L1 -1 8041 7832 771 273 73 26 chr20 25583020 25583337 -41084668 - L1ME2 LINE L1 -16 6148 5817 424 336 0 0 chr20 25583747 25583881 -41084124 + (TG)n Simple_repeat Simple_repeat 1 134 0 359 280 117 43 chr20 25583883 25584208 -41083797 - L1ME4a LINE L1 -153 5968 5620 184 238 0 24 chr20 25584538 25584580 -41083425 - L2 LINE L2 -1 3312 3272 781 295 147 22 chr20 25584734 25585239 -41082766 + L2 LINE L2 2177 2744 -570 433 189 142 9 chr20 25585242 25585348 -41082657 + MER3 DNA MER1_type 76 195 -14 527 251 210 6 chr20 25585363 25585597 -41082408 + L2 LINE L2 2743 3034 -279 546 170 36 0 chr20 25586057 25586169 -41081836 - L1MCa LINE L1 -4481 1945 1830 1689 184 3 13 chr20 25586419 25586723 -41081282 - AluJb SINE Alu -11 301 1 1174 259 18 29 chr20 25586774 25587113 -41080892 + MLT2C1 LTR ERVL 4 338 -59 4438 127 7 25 chr20 25587113 25587515 -41080490 - Tigger1 DNA MER2_type -1 2417 2031 2036 99 0 59 chr20 25587515 25587839 -41080166 + AluSx SINE Alu 1 305 -7 4438 127 7 25 chr20 25587839 25588131 -41079874 - Tigger1 DNA MER2_type -387 2031 1735 2619 116 26 3 chr20 25588246 25588635 -41079370 - L1PB3 LINE L1 -47 6107 5710 10500 132 29 24 chr20 25588635 25589701 -41078304 - Tigger1 DNA MER2_type -675 1743 683 1713 171 14 3 chr20 25589701 25589988 -41078017 - AluJo SINE Alu -22 290 1 10500 132 29 24 chr20 25589988 25590253 -41077752 - Tigger1 DNA MER2_type -1735 683 421 2003 137 3 10 chr20 25590253 25590567 -41077438 - AluSx SINE Alu 0 312 1 10500 132 29 24 chr20 25590567 25590945 -41077060 - Tigger1 DNA MER2_type -1997 421 25 311 207 11 103 chr20 25591099 25591186 -41076819 - L1MCa LINE L1 -4342 2084 2006 1328 243 56 79 chr20 25591191 25591264 -41076741 - L1MC4 LINE L1 -156 7886 7813 2044 101 0 41 chr20 25591264 25591582 -41076423 + AluSq SINE Alu 6 310 -3 1328 243 56 79 chr20 25591582 25592203 -41075802 - L1MC4 LINE L1 -229 7813 7208 1385 130 47 0 chr20 25592790 25593005 -41075000 - AluSx SINE Alu -24 288 64 236 291 126 20 chr20 25593208 25593359 -41074646 - MER5B DNA MER1_type -1 177 11 217 283 200 22 chr20 25594267 25594447 -41073558 - MIR SINE MIR -3 259 48 420 147 74 0 chr20 25596054 25596149 -41071856 - MER5A DNA MER1_type -79 110 9 900 148 0 0 chr20 25598155 25598252 -41069753 + (CA)n Simple_repeat Simple_repeat 1 100 -76 4975 81 11 12 chr20 25598252 25598919 -41069086 - PABL_B LTR ERV1 -1 666 1 900 148 0 0 chr20 25598919 25598997 -41069008 + (CA)n Simple_repeat Simple_repeat 99 176 0 2418 134 61 30 chr20 25599015 25599527 -41068478 - MLT2A2 LTR ERVL 0 554 1 822 200 0 0 chr20 25599527 25599849 -41068156 + (CA)n Simple_repeat Simple_repeat 1 322 0 2112 160 77 3 chr20 25600334 25600722 -41067283 - LTR23 LTR ERV1 -10 427 11 607 172 147 0 chr20 25601212 25601369 -41066636 - LTR54 LTR ERV1 0 510 331 1599 184 0 3 chr20 25601459 25601747 -41066258 - AluJb SINE Alu -18 294 8 193 369 10 19 chr20 25602516 25602619 -41065386 + MIR3 SINE MIR 106 207 -1 22 0 0 0 chr20 25603170 25603192 -41064813 + AT_rich Low_complexity Low_complexity 1 22 0 775 174 26 118 chr20 25603202 25603472 -41064533 + L1MC4 LINE L1 6914 7158 -884 3157 268 117 35 chr20 25603505 25604734 -41063271 - L1MD3 LINE L1 -6 8036 6676 801 230 95 0 chr20 25604734 25604934 -41063071 + MER20 DNA MER1_type 1 219 0 3157 268 117 35 chr20 25604934 25605177 -41062828 - L1MD3 LINE L1 -1366 6676 6454 183 239 239 22 chr20 25606043 25606135 -41061870 + L2 LINE L2 3202 3313 0 217 366 18 9 chr20 25606909 25607021 -41060984 - L2 LINE L2 -252 3061 2949 531 332 64 31 chr20 25607070 25607555 -41060450 - L2 LINE L2 -443 2871 2371 211 275 6 18 chr20 25608932 25609103 -41058902 + (CACCAT)n Simple_repeat Simple_repeat 5 173 0 728 193 18 0 chr20 25609123 25609294 -41058711 + (CACCAT)n Simple_repeat Simple_repeat 1 174 0 440 260 6 0 chr20 25609312 25609485 -41058520 + (CAT)n Simple_repeat Simple_repeat 1 174 0 380 248 0 14 chr20 25609520 25609665 -41058340 + (CACCAT)n Simple_repeat Simple_repeat 1 143 0 212 197 0 28 chr20 25609686 25609757 -41058248 + (CACCAT)n Simple_repeat Simple_repeat 4 72 0 193 356 0 22 chr20 25610429 25610519 -41057486 + L2 LINE L2 3099 3186 -86 640 222 62 12 chr20 25610611 25610773 -41057232 - MIR SINE MIR -59 203 34 628 277 48 19 chr20 25611062 25611268 -41056737 - LTR16C LTR ERVL 0 491 280 204 357 135 11 chr20 25611438 25611623 -41056382 + L2 LINE L2 3044 3251 -21 240 35 0 0 chr20 25612147 25612176 -41055829 + (TA)n Simple_repeat Simple_repeat 1 29 0 1856 124 10 28 chr20 25612176 25612466 -41055539 - AluSx SINE Alu -17 295 11 717 279 113 40 chr20 25612655 25613035 -41054970 + MLT1I LTR MaLR 1 408 -1 454 249 46 55 chr20 25613739 25613976 -41054029 - LTR56 LTR ERV1 -21 424 190 21 0 0 0 chr20 25613976 25613997 -41054008 + AT_rich Low_complexity Low_complexity 1 21 0 3164 171 23 13 chr20 25614002 25614616 -41053389 - L1PB4 LINE L1 -1 6858 6239 1527 185 0 20 chr20 25614618 25614921 -41053084 - AluJo SINE Alu -15 297 1 11311 224 27 11 chr20 25614922 25617994 -41050011 - L1PB4 LINE L1 -667 6192 3075 4047 274 29 73 chr20 25617990 25620173 -41047832 - L1PB4 LINE L1 -4586 2263 616 * 2651 250 32 44 chr20 25620216 25620900 -41047105 - L1P LINE L1 -3325 2821 2152 1995 114 0 4 chr20 25620900 25621204 -41046801 - AluSg SINE Alu 0 303 1 2651 250 32 44 chr20 25621204 25621531 -41046474 - L1P LINE L1 -3994 2152 1822 308 325 8 8 chr20 25621531 25621648 -41046357 + MER69 DNA AcHobo 593 709 -517 615 300 106 26 chr20 25621688 25622038 -41045967 + MER69 DNA AcHobo 697 1074 -1452 * 686 193 41 150 chr20 25622033 25622473 -41045532 + MER69 DNA AcHobo 1938 2329 -197 1502 240 166 17 chr20 25622496 25623075 -41044930 + LTR65 LTR ERV1 3 667 -2 730 272 0 0 chr20 25623077 25623272 -41044733 + MER69 DNA AcHobo 2323 2517 -9 342 0 0 0 chr20 25624674 25624712 -41043293 + (CA)n Simple_repeat Simple_repeat 2 39 0 403 363 0 0 chr20 25626421 25626600 -41041405 + (CA)n Simple_repeat Simple_repeat 1 179 0 335 303 146 19 chr20 25628007 25628268 -41039737 + L1MC4 LINE L1 7482 7775 -267 316 267 12 56 chr20 25628683 25628844 -41039161 + C-rich Low_complexity Low_complexity 6 159 0 823 220 65 45 chr20 25629299 25629608 -41038397 - MER33 DNA MER1_type -4 320 6 246 225 90 27 chr20 25629763 25629874 -41038131 - L2 LINE L2 -344 2970 2853 413 296 69 36 chr20 25630090 25630367 -41037638 - L1ME3 LINE L1 -4 6158 5873 198 0 0 0 chr20 25631299 25631321 -41036684 + (T)n Simple_repeat Simple_repeat 1 22 0 506 271 16 8 chr20 25631769 25631891 -41036114 + FLAM_A SINE Alu 1 123 -19 1110 175 13 94 chr20 25633229 25633537 -41034468 + MER31B LTR ERV1 6 288 -178 3044 100 31 2 chr20 25633537 25633958 -41034047 - HERVK LTR ERVK -6810 433 1 5285 153 20 19 chr20 25633958 25634926 -41033079 - LTR5 LTR ERVK 0 969 1 11089 67 1 39 chr20 25634928 25636505 -41031500 + L1P LINE L1 2849 4365 -1781 1578 108 0 0 chr20 25636505 25636726 -41031279 + L1PA6 LINE L1 5932 6154 0 181 360 56 22 chr20 25638393 25638482 -41029523 + L2 LINE L2 390 481 -2833 1148 248 42 39 chr20 25638565 25639701 -41028304 - L1MC4 LINE L1 -1 8041 6837 632 216 36 0 chr20 25639789 25639928 -41028077 + MER20 DNA MER1_type 1 144 -75 12982 183 126 5 chr20 25639928 25642460 -41025545 + L1PA15-16 LINE L1 1 2837 -4012 189 329 13 0 chr20 25642460 25642536 -41025469 - MIR SINE MIR -79 183 107 627 284 40 99 chr20 25642591 25643013 -41024992 + LTR16A LTR ERVL 47 443 -7 405 0 0 0 chr20 25643881 25643926 -41024079 + (GA)n Simple_repeat Simple_repeat 1 45 0 273 163 0 0 chr20 25643967 25644016 -41023989 + T-rich Low_complexity Low_complexity 1 49 0 1695 162 7 17 chr20 25644743 25645039 -41022966 - AluSq SINE Alu -20 293 1 330 308 90 60 chr20 25645494 25645728 -41022277 - L1MC4 LINE L1 -1869 5939 5699 387 294 35 35 chr20 25645828 25646029 -41021976 + MLT1L LTR MaLR 186 386 -229 2278 299 79 16 chr20 25646383 25647381 -41020624 + MER69 DNA AcHobo 7 1067 -1459 605 245 86 40 chr20 25647434 25647760 -41020245 + MER69 DNA AcHobo 1987 2327 -199 270 177 170 78 chr20 25647793 25647934 -41020071 + LTR65 LTR ERV1 12 165 -504 1089 59 0 0 chr20 25648136 25648272 -41019733 + MER41B LTR ERV1 1 136 -499 * 1350 206 201 10 chr20 25648271 25648674 -41019331 + LTR65 LTR ERV1 151 630 -39 449 216 33 94 chr20 25648705 25648918 -41019087 + MER69 DNA AcHobo 2323 2522 -4 293 349 24 0 chr20 25849441 25849610 -40818395 + (CA)n Simple_repeat Simple_repeat 2 174 0 278 26 26 0 chr20 25849749 25849788 -40818217 + (CA)n Simple_repeat Simple_repeat 2 41 0 189 231 39 0 chr20 25850763 25850815 -40817190 + MIR SINE MIR 88 141 -67 376 311 133 26 chr20 25851376 25851646 -40816359 + L1MC4 LINE L1 7478 7776 -266 339 298 0 41 chr20 25852120 25852241 -40815764 + C-rich Low_complexity Low_complexity 1 116 0 951 253 60 3 chr20 25852696 25852996 -40815009 - MER33 DNA MER1_type -3 321 5 343 215 192 29 chr20 25853129 25853301 -40814704 - L2 LINE L2 -296 3017 2818 361 311 65 36 chr20 25853462 25853739 -40814266 - L1ME3 LINE L1 -9 6153 5869 535 147 29 110 chr20 25855035 25855171 -40812834 + FLAM_A SINE Alu 5 129 -4 1390 208 21 74 chr20 25856451 25856884 -40811121 + MER31B LTR ERV1 6 415 -51 223 287 103 15 chr20 25856930 25857066 -40810939 + L2 LINE L2 2291 2438 -876 266 279 58 12 chr20 25857086 25857172 -40810833 + MIR SINE MIR 94 183 -79 254 305 71 57 chr20 25857270 25857480 -40810525 - MLT1H LTR MaLR -242 307 95 275 193 0 36 chr20 25857580 25857663 -40810342 + (TCTA)n Simple_repeat Simple_repeat 3 82 0 808 220 105 5 chr20 25859458 25859667 -40808338 + MSTA LTR MaLR 1 230 -198 375 364 100 12 chr20 25859679 25860314 -40807691 - L2 LINE L2 -245 3068 2377 2768 168 44 2 chr20 25860414 25860891 -40807114 - LOR1a LTR ERV1 0 497 1 551 165 0 0 chr20 25860892 25860983 -40807022 - LOR1a-int LTR ERV1 -3 8117 8027 * 659 96 11 0 chr20 25860982 25861076 -40806929 - LOR1a-int LTR ERV1 -858 7262 7168 295 222 0 0 chr20 25861076 25861139 -40806866 - MER72 LTR ERV1 -650 72 10 1197 161 5 23 chr20 25861139 25861357 -40806648 - LOR1a-int LTR ERV1 -1077 7043 6830 1922 120 0 0 chr20 25861538 25861812 -40806193 - LOR1a-int LTR ERV1 -4070 4050 3777 504 198 8 25 chr20 25861800 25861921 -40806084 - LOR1a-int LTR ERV1 -2186 4145 4027 * 6862 114 43 6 chr20 25862116 25863255 -40804750 - LOR1a-int LTR ERV1 -4337 3783 2603 934 128 8 0 chr20 25863257 25863390 -40804615 + AluJo SINE Alu 3 136 -176 9384 145 49 38 chr20 25863392 25864363 -40803642 - LOR1a-int LTR ERV1 -5113 2703 1744 2198 116 0 0 chr20 25864363 25864656 -40803349 - AluY SINE Alu -18 293 1 2367 95 0 0 chr20 25864665 25864961 -40803044 - AluSg SINE Alu -14 296 1 9384 145 49 38 chr20 25864961 25866248 -40801757 - LOR1a-int LTR ERV1 -6079 1737 1 2350 162 94 9 chr20 25866248 25866706 -40801299 - LOR1a LTR ERV1 0 497 1 354 263 0 0 chr20 25867609 25867685 -40800320 + MER52A LTR ERV1 1 76 -1679 6742 193 84 22 chr20 25867685 25869165 -40798840 + MER52A LTR ERV1 184 1755 0 209 289 0 40 chr20 25869182 25869258 -40798747 + CT-rich Low_complexity Low_complexity 4 76 0 856 193 17 10 chr20 25869370 25869663 -40798342 + L1 LINE L1 3868 4239 -1907 225 156 0 0 chr20 25869663 25869708 -40798297 + Alu SINE Alu 253 297 -3 1819 134 4 14 chr20 25869708 25869985 -40798020 - AluSg SINE Alu -36 274 1 651 131 0 0 chr20 25869985 25870084 -40797921 - AluSp/q SINE Alu -5 308 210 1254 73 0 0 chr20 25872657 25872808 -40795197 + AluY SINE Alu 155 305 -6 2055 128 7 17 chr20 25872897 25873194 -40794811 - AluSx SINE Alu 0 312 19 1950 155 0 0 chr20 25873241 25873532 -40794473 - AluSg SINE Alu -19 291 1 1910 155 0 7 chr20 25873535 25873839 -40794166 - AluSx SINE Alu -10 302 1 2118 132 3 0 chr20 25873863 25874158 -40793847 + AluSx SINE Alu 13 308 -4 191 377 0 60 chr20 25874252 25874419 -40793586 + MIR3 SINE MIR 16 172 -36 1553 168 64 7 chr20 25874580 25874860 -40793145 + AluJo SINE Alu 1 296 -16 298 199 3 66 chr20 25877654 25877890 -40790115 + (TTA)n Simple_repeat Simple_repeat 1 221 0 2254 125 0 0 chr20 25879235 25879586 -40788419 - AluSx SINE Alu 0 312 1 1095 181 91 4 chr20 25879588 25879842 -40788163 - L1PA16 LINE L1 -10 6156 5881 1201 132 0 0 chr20 25881442 25881601 -40786404 + AluSg SINE Alu 1 159 -151 297 0 0 0 chr20 25881864 25881897 -40786108 + (TTGTG)n Simple_repeat Simple_repeat 2 34 0 1721 194 0 0 chr20 25881904 25882192 -40785813 - AluJo SINE Alu -23 289 2 314 291 143 79 chr20 25882324 25883255 -40784750 + L1M4 LINE L1 2131 3296 -2850 468 224 65 82 chr20 25883446 25883814 -40784191 - MLT1H LTR MaLR -13 536 117 804 203 0 0 chr20 25884578 25884923 -40783082 + (CA)n Simple_repeat Simple_repeat 1 345 0 700 243 116 71 chr20 25885260 25885593 -40782412 + MER34B LTR ERV1 6 374 -191 2230 98 21 0 chr20 25885593 25885879 -40782126 - AluSq SINE Alu -21 292 1 700 243 116 71 chr20 25885879 25886081 -40781924 + MER34B LTR ERV1 374 565 0 265 344 0 0 chr20 25886085 25886181 -40781824 + MER34 LTR ERV1 1 96 -446 555 184 24 8 chr20 25886184 25886309 -40781696 + LTR29 LTR ERV1 137 263 -359 601 267 73 6 chr20 25886311 25886476 -40781529 - MER21B LTR ERV1 -676 187 12 1030 188 105 46 chr20 25886745 25887139 -40780866 + LTR54 LTR ERV1 38 498 0 * 1277 295 66 12 chr20 25887139 25887646 -40780359 - MLT1G1 LTR MaLR -58 537 3 707 283 80 9 chr20 25889256 25889482 -40778523 - MIR SINE MIR -4 258 17 1472 295 114 32 chr20 25889581 25890354 -40777651 + L2 LINE L2 1810 2645 -669 199 277 208 30 chr20 25890398 25890600 -40777405 + MIR SINE MIR 24 261 -1 503 288 216 36 chr20 25890685 25891098 -40776907 + L2 LINE L2 2827 3313 0 281 330 103 21 chr20 25891116 25891310 -40776695 - MIR SINE MIR -22 240 31 537 195 9 0 chr20 25891405 25891518 -40776487 + MER3 DNA MER1_type 96 209 0 1995 192 6 6 chr20 25891595 25891960 -40776045 + MLT1A1 LTR MaLR 1 365 0 256 335 69 5 chr20 25895524 25895712 -40772293 + Charlie7 DNA MER1_type 36 235 -2377 203 152 9 57 chr20 25895752 25895857 -40772148 + (TG)n Simple_repeat Simple_repeat 1 100 0 995 187 77 40 chr20 25895876 25896202 -40771803 + MER31B LTR ERV1 128 465 -1 2221 129 48 10 chr20 25898895 25899290 -40768715 - L1MB3 LINE L1 -2 6181 5772 308 265 198 58 chr20 25900703 25900960 -40767045 + LTR16C LTR ERVL 127 419 -72 3263 85 28 5 chr20 25901029 25901463 -40766542 + MLT2A1 LTR ERVL 1 444 0 11407 66 9 3 chr20 25901463 25902882 -40765123 + HERVL-A1 LTR ERVL 1 1427 -4227 1270 86 15 51 chr20 25902867 25903064 -40764941 + HERVL LTR ERVL 5132 5321 -333 * 306 156 0 0 chr20 25903121 25903166 -40764839 + L1MC4 LINE L1 6659 6703 -1339 309 98 78 0 chr20 25903203 25903254 -40764751 + MLT2A2 LTR ERVL 399 453 0 281 206 31 52 chr20 25903563 25903660 -40764345 + LTR16C LTR ERVL 393 487 -4 251 319 11 11 chr20 25904892 25904986 -40763019 + GA-rich Low_complexity Low_complexity 3 96 0 456 257 117 32 chr20 25905323 25905759 -40762246 - MLT1F LTR MaLR -35 507 1 342 311 113 42 chr20 25906596 25906834 -40761171 - HAL1 LINE L1 -8 2499 2245 334 330 67 45 chr20 25907970 25908237 -40759768 + HAL1 LINE L1 1077 1349 -1158 493 352 86 17 chr20 25908371 25908672 -40759333 - HAL1 LINE L1 -1324 1183 862 31 0 0 0 chr20 25908843 25908874 -40759131 + AT_rich Low_complexity Low_complexity 1 31 0 366 234 81 117 chr20 25908999 25909306 -40758699 + MLT1I LTR MaLR 104 399 -10 320 272 156 21 chr20 25909430 25909713 -40758292 - L1M4 LINE L1 -1302 4844 4524 30 27 0 0 chr20 25910229 25910266 -40757739 + AT_rich Low_complexity Low_complexity 1 37 0 2061 129 0 3 chr20 25910266 25910575 -40757430 - AluSq SINE Alu -5 308 1 2019 194 60 17 chr20 25911606 25912008 -40755997 + MSTB1 LTR MaLR 1 419 -13 251 200 0 0 chr20 25912203 25912253 -40755752 - MLT2B3 LTR ERVL -4 550 501 210 206 199 59 chr20 25912428 25912564 -40755441 - MIR SINE MIR -38 224 70 646 286 93 46 chr20 25913624 25914102 -40753903 + MER101 LTR ERV1 24 445 -29 200 189 0 0 chr20 25914402 25914439 -40753566 + CT-rich Low_complexity Low_complexity 1 37 0 189 0 0 0 chr20 25914445 25914466 -40753539 + (TTG)n Simple_repeat Simple_repeat 1 21 0 708 279 138 74 chr20 25914710 25915175 -40752830 + MLT1H LTR MaLR 15 549 0 296 224 0 0 chr20 25915275 25915342 -40752663 - MLT1K LTR MaLR -23 565 499 2444 68 6 0 chr20 25915683 25915994 -40752011 - AluSq SINE Alu 0 313 1 802 324 71 38 chr20 25915997 25916519 -40751486 + LTR67 LTR ERVL 8 546 -11 616 289 158 16 chr20 25916993 25917458 -40750547 - MLT1H1 LTR MaLR -2 565 8 697 258 218 17 chr20 25917509 25917807 -40750198 - LTR16C LTR ERVL 0 491 134 337 289 85 63 chr20 25918068 25918338 -40749667 - MLT1K LTR MaLR -9 579 304 985 264 127 25 chr20 25921554 25922027 -40745978 + L2 LINE L2 368 888 -2426 503 297 0 0 chr20 25922574 25922712 -40745293 + L2 LINE L2 1817 1954 -1360 318 80 0 0 chr20 25923205 25923255 -40744750 + (T)n Simple_repeat Simple_repeat 1 50 0 598 274 193 43 chr20 25923261 25924001 -40744004 + L2 LINE L2 2421 3270 -2 447 284 17 0 chr20 25925278 25925394 -40742611 + MER20B DNA MER1_type 36 153 -630 261 254 0 0 chr20 25925408 25925471 -40742534 - MLT1I LTR MaLR -27 382 320 236 193 129 86 chr20 25925598 25925738 -40742267 - MLT1J LTR MaLR -253 258 113 22 35 0 0 chr20 25926759 25926788 -40741217 + AT_rich Low_complexity Low_complexity 1 29 0 399 299 72 29 chr20 25927238 25927516 -40740489 + LTR16A1 LTR ERVL 168 457 0 723 271 150 12 chr20 25928042 25928569 -40739436 - Charlie7 DNA MER1_type -243 2369 1721 1637 179 6 31 chr20 25929204 25929523 -40738482 - AluJo SINE Alu -1 311 1 288 250 28 0 chr20 25930484 25930556 -40737449 + (CA)n Simple_repeat Simple_repeat 2 75 0 189 325 53 18 chr20 25930754 25930868 -40737137 + L2 LINE L2 3149 3266 -6 277 323 181 0 chr20 25931014 25931169 -40736836 - MIR SINE MIR -19 243 61 471 264 206 18 chr20 25931600 25931876 -40736129 + LTR16C LTR ERVL 154 481 -10 235 200 12 12 chr20 25932163 25932248 -40735757 + CT-rich Low_complexity Low_complexity 1 85 0 21 0 0 0 chr20 25932787 25932808 -40735197 + AT_rich Low_complexity Low_complexity 1 21 0 2114 138 47 96 chr20 25933088 25933538 -40734467 - MSTA LTR MaLR 0 428 1 1128 120 0 0 chr20 25935541 25935729 -40732276 - AluY SINE Alu 0 312 125 207 69 0 0 chr20 25986888 25986917 -40681088 + (CA)n Simple_repeat Simple_repeat 1 29 0 180 77 0 0 chr20 25987647 25987673 -40680332 + (TC)n Simple_repeat Simple_repeat 2 27 0 256 299 0 0 chr20 25987677 25987744 -40680261 + (TA)n Simple_repeat Simple_repeat 1 67 0 378 317 100 31 chr20 25988031 25988422 -40679583 + MLT1L LTR MaLR 183 600 -15 2231 297 72 17 chr20 25988593 25989972 -40678033 + MER69 DNA AcHobo 1 2327 -199 1540 224 170 19 chr20 25990006 25990578 -40677427 + LTR65 LTR ERV1 12 669 0 642 244 10 15 chr20 25990578 25990779 -40677226 + MER69 DNA AcHobo 2323 2522 -4 293 349 24 0 chr20 25993806 25993975 -40674030 + (CA)n Simple_repeat Simple_repeat 2 174 0 332 22 22 0 chr20 25994114 25994159 -40673846 + (CA)n Simple_repeat Simple_repeat 2 47 0 350 311 133 26 chr20 25995747 25996017 -40671988 + L1MC4 LINE L1 7478 7776 -266 339 298 0 41 chr20 25996491 25996612 -40671393 + C-rich Low_complexity Low_complexity 1 116 0 971 253 60 3 chr20 25997067 25997367 -40670638 - MER33 DNA MER1_type -3 321 5 309 209 192 29 chr20 25997500 25997672 -40670333 - L2 LINE L2 -296 3017 2818 412 311 65 36 chr20 25997833 25998110 -40669895 - L1ME3 LINE L1 -9 6153 5869 563 147 29 110 chr20 25999406 25999542 -40668463 + FLAM_A SINE Alu 5 129 -4 1531 206 21 74 chr20 26000822 26001255 -40666750 + MER31B LTR ERV1 6 415 -51 217 279 103 15 chr20 26001301 26001437 -40666568 + L2 LINE L2 2291 2438 -876 260 279 58 12 chr20 26001457 26001543 -40666462 + MIR SINE MIR 94 183 -79 272 282 109 73 chr20 26001603 26001851 -40666154 - MLT1H LTR MaLR -198 351 95 275 193 0 36 chr20 26001951 26002034 -40665971 + (TCTA)n Simple_repeat Simple_repeat 3 82 0 860 220 105 5 chr20 26003831 26004040 -40663965 + MSTA LTR MaLR 1 230 -198 354 360 111 17 chr20 26004052 26004687 -40663318 - L2 LINE L2 -245 3068 2377 2866 170 44 2 chr20 26004787 26005264 -40662741 - LOR1a LTR ERV1 0 497 1 582 165 0 0 chr20 26005265 26005356 -40662649 - LOR1a-int LTR ERV1 -3 8117 8027 * 692 96 11 0 chr20 26005355 26005449 -40662556 - LOR1a-int LTR ERV1 -858 7262 7168 308 222 0 0 chr20 26005449 26005512 -40662493 - MER72 LTR ERV1 -650 72 10 1267 161 5 23 chr20 26005512 26005730 -40662275 - LOR1a-int LTR ERV1 -1077 7043 6830 2027 120 0 0 chr20 26005911 26006185 -40661820 - LOR1a-int LTR ERV1 -4070 4050 3777 548 198 8 25 chr20 26006173 26006294 -40661711 - LOR1a-int LTR ERV1 -2186 4145 4027 * 7275 114 43 6 chr20 26006489 26007628 -40660377 - LOR1a-int LTR ERV1 -4337 3783 2603 914 123 8 0 chr20 26007630 26007760 -40660245 + FLAM_C SINE Alu 3 133 -10 10034 145 48 37 chr20 26007762 26008736 -40659269 - LOR1a-int LTR ERV1 -5110 2706 1744 2178 116 0 0 chr20 26008736 26009030 -40658975 - AluY SINE Alu -17 294 1 2330 95 0 0 chr20 26009039 26009335 -40658670 - AluSg SINE Alu -14 296 1 10034 145 48 37 chr20 26009335 26010622 -40657383 - LOR1a-int LTR ERV1 -6079 1737 1 2473 162 94 9 chr20 26010622 26011080 -40656925 - LOR1a LTR ERV1 0 497 1 7053 194 88 22 chr20 26011983 26013539 -40654466 + MER52A LTR ERV1 1 1755 0 209 289 0 40 chr20 26013556 26013632 -40654373 + CT-rich Low_complexity Low_complexity 4 76 0 4335 194 54 41 chr20 26013725 26014985 -40653020 + L1PB4 LINE L1 3845 5213 -943 1593 193 3 3 chr20 26014985 26015285 -40652720 + AluJo SINE Alu 12 311 -1 4335 194 54 41 chr20 26015285 26015873 -40652132 + L1PB4 LINE L1 5213 5792 -364 861 52 0 17 chr20 26015928 26016080 -40651925 + L1PA4 LINE L1 6019 6168 0 1601 201 25 3 chr20 26016080 26016398 -40651607 + L1PB4 LINE L1 5829 6153 -3 357 305 9 0 chr20 26016585 26016690 -40651315 + (CAT)n Simple_repeat Simple_repeat 3 108 0 397 204 44 0 chr20 26016704 26016841 -40651164 + (CACCAT)n Simple_repeat Simple_repeat 1 143 0 482 228 0 5 chr20 26016854 26017065 -40650940 + (CACCAT)n Simple_repeat Simple_repeat 1 209 0 2190 194 36 14 chr20 26017065 26017482 -40650523 + MSTB LTR MaLR 1 426 0 598 215 6 11 chr20 26017484 26017661 -40650344 + (CACCAT)n Simple_repeat Simple_repeat 4 179 0 186 298 88 0 chr20 26018027 26018084 -40649921 - MER5A DNA MER1_type -63 126 65 29 28 0 0 chr20 26018601 26018637 -40649368 + AT_rich Low_complexity Low_complexity 1 36 0 523 222 56 35 chr20 26018664 26018808 -40649197 - MIR SINE MIR -82 180 34 643 260 56 20 chr20 26019110 26019306 -40648699 - LTR16C LTR ERVL -18 473 271 22 35 0 0 chr20 26019767 26019796 -40648209 + AT_rich Low_complexity Low_complexity 1 29 0 420 309 131 33 chr20 26020352 26020689 -40647316 + MLT1I LTR MaLR 1 370 -39 4527 163 30 24 chr20 26020698 26021533 -40646472 - L1PA16 LINE L1 -9 6157 5318 * 7448 144 14 7 chr20 26021511 26023030 -40644975 - L1PA12 LINE L1 -159 6009 4503 2314 92 3 3 chr20 26023030 26023333 -40644672 - AluY SINE Alu -8 303 1 7448 144 14 7 chr20 26023333 26023418 -40644587 - L1PA12 LINE L1 -1665 4503 4420 219 69 0 0 chr20 26023418 26023447 -40644558 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 7448 144 14 7 chr20 26023447 26023771 -40644234 - L1PA12 LINE L1 -1748 4420 4066 4240 139 29 3 chr20 26023777 26024488 -40643517 - L1PA15-16 LINE L1 -3866 2983 2255 1435 161 8 12 chr20 26024485 26024733 -40643272 - L1MB3 LINE L1 -236 5947 5701 * 339 276 10 0 chr20 26025257 26025355 -40642650 - MIR SINE MIR -71 191 93 536 294 77 70 chr20 26025361 26025789 -40642216 + LTR16A LTR ERVL 12 442 -8 192 152 0 0 chr20 26026574 26026607 -40641398 + GA-rich Low_complexity Low_complexity 1 33 0 195 42 0 0 chr20 26027800 26027824 -40640181 + (TC)n Simple_repeat Simple_repeat 2 25 0 221 196 18 0 chr20 26027829 26027885 -40640120 + (TATATG)n Simple_repeat Simple_repeat 1 57 0 2189 289 92 16 chr20 26028330 26029322 -40638683 + MER69 DNA AcHobo 1 1067 -1459 679 263 101 20 chr20 26029327 26029684 -40638321 + MER69 DNA AcHobo 1942 2327 -199 2190 110 17 0 chr20 26029690 26029990 -40638015 + AluSg SINE Alu 1 305 -5 1072 207 175 35 chr20 26030023 26030428 -40637577 + LTR65 LTR ERV1 3 464 -205 669 234 52 0 chr20 26030508 26030700 -40637305 + MER69 DNA AcHobo 2325 2526 0 365 238 140 61 chr20 26033232 26033325 -40634680 + MER5A DNA MER1_type 10 94 -95 248 0 0 30 chr20 26033325 26033358 -40634647 + (GTGTG)n Simple_repeat Simple_repeat 1 32 0 365 238 140 61 chr20 26033358 26033428 -40634577 + MER5A DNA MER1_type 94 186 -3 490 167 0 0 chr20 26034275 26034359 -40633646 - L1MB3 LINE L1 -635 5665 5582 620 83 19 83 chr20 26034359 26034467 -40633538 + L1MA5 LINE L1 6194 6294 -6 1223 172 52 39 chr20 26034860 26035093 -40632912 - LOR1a LTR ERV1 0 497 262 807 127 102 19 chr20 26035095 26035252 -40632753 - LOR1b LTR ERV1 -291 170 1 1676 133 23 0 chr20 26035252 26035508 -40632497 - LOR1b-int LTR ERV1 0 8120 7859 1944 148 10 3 chr20 26035539 26035888 -40632117 - LOR1a-int LTR ERV1 -595 6163 3777 417 250 0 26 chr20 26035876 26035992 -40632013 - LOR1a-int LTR ERV1 -2186 4145 4033 * 7609 111 46 26 chr20 26036175 26036294 -40631711 - LOR1a-int LTR ERV1 -4341 3779 3664 4655 122 9 3 chr20 26036294 26036976 -40631029 + L1MA2 LINE L1 5615 6300 -4 7609 111 46 26 chr20 26036976 26038126 -40629879 - LOR1a-int LTR ERV1 -4456 3664 2485 10508 116 17 11 chr20 26038151 26039807 -40628198 - LOR1a-int LTR ERV1 -5931 2189 524 300 176 0 0 chr20 26039837 26039888 -40628117 - 5S rRNA rRNA -70 51 1 1388 144 39 0 chr20 26039978 26040207 -40627798 - LOR1a-int LTR ERV1 -7685 435 198 1817 172 44 28 chr20 26040231 26040592 -40627413 - LOR1a-int LTR ERV1 -7753 367 1 1404 180 27 12 chr20 26040592 26040989 -40627016 - LOR1a LTR ERV1 0 497 3 874 168 0 0 chr20 26041386 26041517 -40626488 - AluSq/x SINE Alu -182 131 1 236 291 171 26 chr20 26041753 26041870 -40626135 - L2 LINE L2 0 3313 3180 221 219 0 0 chr20 26041873 26041914 -40626091 + G-rich Low_complexity Low_complexity 2 42 0 475 282 73 39 chr20 26042096 26042355 -40625650 + MLT1-int LTR MaLR 334 601 -770 236 337 0 0 chr20 26042585 26042671 -40625334 + MLT1-int LTR MaLR 699 784 -587 2203 185 129 11 chr20 26043023 26043466 -40624539 - LTR42 LTR ERVL 0 495 1 1281 224 197 8 chr20 26043739 26044114 -40623891 + MLT1F1 LTR MaLR 122 567 0 181 229 125 0 chr20 26044480 26044528 -40623477 + L2 LINE L2 3204 3257 -56 2602 268 120 26 chr20 26044626 26045709 -40622296 - L1MC4 LINE L1 0 8042 6858 352 233 22 0 chr20 26046932 26047022 -40620983 - MER103 DNA DNA -65 101 10 846 251 55 25 chr20 26047214 26047449 -40620556 + MIR SINE MIR 21 262 0 948 259 71 7 chr20 26047690 26047984 -40620021 - L2 LINE L2 -899 2415 2103 413 252 7 0 chr20 26048770 26048905 -40619100 + (TCCA)n Simple_repeat Simple_repeat 1 136 0 644 237 188 11 chr20 26049079 26049265 -40618740 + MER20 DNA MER1_type 1 219 0 206 284 83 37 chr20 26049423 26049532 -40618473 - L2 LINE L2 -558 2756 2643 2063 132 0 7 chr20 26049711 26050007 -40617998 - AluSx SINE Alu -11 301 8 207 0 0 0 chr20 26050012 26050035 -40617970 + (T)n Simple_repeat Simple_repeat 1 23 0 2182 137 0 7 chr20 26050815 26051121 -40616884 + AluSp SINE Alu 2 305 -8 2744 154 9 4 chr20 26051166 26051619 -40616386 - MLT2C2 LTR ERVL -7 457 3 23 33 0 0 chr20 26051675 26051705 -40616300 + AT_rich Low_complexity Low_complexity 1 30 0 2381 113 0 0 chr20 26051747 26052058 -40615947 - AluSx SINE Alu -1 311 1 2192 100 28 0 chr20 26052258 26052549 -40615456 + AluSc SINE Alu 1 299 -10 229 302 0 0 chr20 26053355 26053418 -40614587 + (TGGA)n Simple_repeat Simple_repeat 2 64 0 774 162 0 0 chr20 26054187 26054366 -40613639 + (CA)n Simple_repeat Simple_repeat 1 179 0 638 179 5 0 chr20 26054432 26054660 -40613345 + (CA)n Simple_repeat Simple_repeat 1 229 0 288 337 17 22 chr20 26054930 26055108 -40612897 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 * 361 297 29 23 chr20 26054976 26055151 -40612854 + (CAGA)n Simple_repeat Simple_repeat 4 179 0 6348 128 18 18 chr20 26056780 26057749 -40610256 + LTR5 LTR ERVK 1 969 0 181 284 98 20 chr20 26057894 26057996 -40610009 + MIR SINE MIR 37 146 -62 693 186 8 0 chr20 26058033 26058151 -40609854 + AluSq/x SINE Alu 2 120 -192 38 0 0 0 chr20 26058153 26058191 -40609814 + AT_rich Low_complexity Low_complexity 1 38 0 289 276 288 12 chr20 26061020 26061556 -40606449 - L2 LINE L2 0 3313 2584 293 308 123 8 chr20 26061570 26061830 -40606175 - L2 LINE L2 -885 2429 2140 2332 47 9 68 chr20 26061887 26062208 -40605797 + AluY SINE Alu 3 304 -7 1810 141 4 14 chr20 26062208 26062485 -40605520 - AluSg SINE Alu -36 274 1 632 121 0 0 chr20 26062485 26062584 -40605421 - AluSp/q SINE Alu -5 308 210 1260 73 0 0 chr20 26065157 26065308 -40602697 + AluY SINE Alu 155 305 -6 2054 128 7 17 chr20 26065397 26065694 -40602311 - AluSx SINE Alu 0 312 19 1962 155 0 0 chr20 26065741 26066032 -40601973 - AluSg SINE Alu -19 291 1 1912 155 0 7 chr20 26066035 26066339 -40601666 - AluSx SINE Alu -10 302 1 2119 132 3 0 chr20 26066363 26066658 -40601347 + AluSx SINE Alu 13 308 -4 1556 168 64 7 chr20 26067080 26067360 -40600645 + AluJo SINE Alu 1 296 -16 298 199 3 66 chr20 26070154 26070390 -40597615 + (TTA)n Simple_repeat Simple_repeat 1 221 0 2262 125 0 0 chr20 26071735 26072086 -40595919 - AluSx SINE Alu 0 312 1 1118 181 91 4 chr20 26072088 26072342 -40595663 - L1PA16 LINE L1 -10 6156 5881 1207 132 0 0 chr20 26073942 26074101 -40593904 + AluSg SINE Alu 1 159 -151 297 0 0 0 chr20 26074364 26074397 -40593608 + (TTGTG)n Simple_repeat Simple_repeat 2 34 0 1730 194 0 0 chr20 26074404 26074692 -40593313 - AluJo SINE Alu -23 289 2 350 301 125 82 chr20 26074824 26075755 -40592250 + L1M4 LINE L1 2131 3296 -2850 478 236 61 81 chr20 26075946 26076370 -40591635 - MLT1H LTR MaLR -13 536 21 804 203 0 0 chr20 26077078 26077423 -40590582 + (CA)n Simple_repeat Simple_repeat 1 345 0 767 259 108 63 chr20 26077760 26078093 -40589912 + MER34B LTR ERV1 6 374 -191 2241 98 21 0 chr20 26078093 26078379 -40589626 - AluSq SINE Alu -21 292 1 767 259 108 63 chr20 26078379 26078581 -40589424 + MER34B LTR ERV1 374 565 0 281 344 0 0 chr20 26078585 26078681 -40589324 + MER34 LTR ERV1 1 96 -446 567 184 24 8 chr20 26078684 26078809 -40589196 + LTR29 LTR ERV1 137 263 -359 623 267 73 6 chr20 26078811 26078976 -40589029 - MER21B LTR ERV1 -676 187 12 1041 190 105 46 chr20 26079245 26079639 -40588366 + LTR54 LTR ERV1 38 498 0 * 1385 295 66 12 chr20 26079639 26080146 -40587859 - MLT1G1 LTR MaLR -58 537 3 662 287 78 9 chr20 26081752 26081982 -40586023 - MIR SINE MIR 0 262 17 1381 298 67 26 chr20 26082081 26082723 -40585282 + L2 LINE L2 1810 2477 -837 545 317 33 46 chr20 26083295 26083598 -40584407 + L2 LINE L2 3015 3313 0 247 354 51 25 chr20 26083652 26083810 -40584195 - MIR SINE MIR -70 192 31 545 217 8 0 chr20 26083898 26084018 -40583987 + MER3 DNA MER1_type 89 209 0 1876 192 6 6 chr20 26084095 26084460 -40583545 + MLT1A1 LTR MaLR 1 365 0 282 356 64 0 chr20 26088024 26088212 -40579793 + Charlie7 DNA MER1_type 36 235 -2377 203 152 9 57 chr20 26088252 26088357 -40579648 + (TG)n Simple_repeat Simple_repeat 1 100 0 1033 206 64 28 chr20 26088376 26088702 -40579303 + MER31B LTR ERV1 128 465 -1 2096 129 48 10 chr20 26091395 26091790 -40576215 - L1MB3 LINE L1 -2 6181 5772 297 288 183 43 chr20 26093203 26093460 -40574545 + LTR16C LTR ERVL 127 419 -72 3101 85 28 5 chr20 26093529 26093963 -40574042 + MLT2A1 LTR ERVL 1 444 0 10858 70 7 1 chr20 26093963 26095382 -40572623 + HERVL-A1 LTR ERVL 1 1427 -4227 1201 91 15 51 chr20 26095367 26095564 -40572441 + HERVL LTR ERVL 5132 5321 -333 * 302 156 0 0 chr20 26095621 26095666 -40572339 + L1MC4 LINE L1 6659 6703 -1339 291 98 78 0 chr20 26095703 26095754 -40572251 + MLT2A2 LTR ERVL 399 453 0 272 206 31 52 chr20 26096063 26096160 -40571845 + LTR16C LTR ERVL 393 487 -4 251 319 11 11 chr20 26097392 26097486 -40570519 + GA-rich Low_complexity Low_complexity 3 96 0 429 274 119 25 chr20 26097823 26098259 -40569746 - MLT1F LTR MaLR -35 507 1 340 311 113 42 chr20 26099096 26099309 -40568696 - HAL1 LINE L1 -8 2499 2249 21 0 0 0 chr20 26099309 26099330 -40568675 + AT_rich Low_complexity Low_complexity 1 21 0 343 352 86 17 chr20 26100871 26101172 -40566833 - HAL1 LINE L1 -1324 1183 862 31 0 0 0 chr20 26101343 26101374 -40566631 + AT_rich Low_complexity Low_complexity 1 31 0 350 231 81 117 chr20 26101499 26101806 -40566199 + MLT1I LTR MaLR 104 399 -10 327 272 156 21 chr20 26101930 26102213 -40565792 - L1M4 LINE L1 -1302 4844 4524 30 27 0 0 chr20 26102729 26102766 -40565239 + AT_rich Low_complexity Low_complexity 1 37 0 2185 129 0 3 chr20 26102766 26103075 -40564930 - AluSq SINE Alu -5 308 1 2006 194 60 17 chr20 26104106 26104508 -40563497 + MSTB1 LTR MaLR 1 419 -13 251 200 0 0 chr20 26104703 26104753 -40563252 - MLT2B3 LTR ERVL -4 550 501 655 289 93 46 chr20 26106124 26106602 -40561403 + MER101 LTR ERV1 24 445 -29 200 189 0 0 chr20 26106902 26106939 -40561066 + CT-rich Low_complexity Low_complexity 1 37 0 189 0 0 0 chr20 26106945 26106966 -40561039 + (TTG)n Simple_repeat Simple_repeat 1 21 0 698 279 138 74 chr20 26107210 26107675 -40560330 + MLT1H LTR MaLR 15 549 0 300 224 0 0 chr20 26107775 26107842 -40560163 - MLT1K LTR MaLR -23 565 499 2576 68 6 0 chr20 26108183 26108494 -40559511 - AluSq SINE Alu 0 313 1 766 316 77 44 chr20 26108497 26109019 -40558986 + LTR67 LTR ERVL 8 546 -11 616 289 158 16 chr20 26109493 26109958 -40558047 - MLT1H1 LTR MaLR -2 565 8 687 258 218 17 chr20 26110009 26110307 -40557698 - LTR16C LTR ERVL 0 491 134 330 289 85 63 chr20 26110568 26110838 -40557167 - MLT1K LTR MaLR -9 579 304 801 266 127 25 chr20 26114054 26114527 -40553478 + L2 LINE L2 368 888 -2426 450 297 0 0 chr20 26115074 26115212 -40552793 + L2 LINE L2 1817 1954 -1360 318 80 0 0 chr20 26115705 26115755 -40552250 + (T)n Simple_repeat Simple_repeat 1 50 0 425 274 193 43 chr20 26115761 26116501 -40551504 + L2 LINE L2 2421 3270 -2 448 284 17 0 chr20 26117778 26117894 -40550111 + MER20B DNA MER1_type 36 153 -630 260 254 0 0 chr20 26117908 26117971 -40550034 - MLT1I LTR MaLR -27 382 320 22 35 0 0 chr20 26119259 26119288 -40548717 + AT_rich Low_complexity Low_complexity 1 29 0 365 299 72 29 chr20 26119738 26120016 -40547989 + LTR16A1 LTR ERVL 168 457 0 744 271 150 12 chr20 26120542 26121069 -40546936 - Charlie7 DNA MER1_type -243 2369 1721 1747 179 6 31 chr20 26121704 26122023 -40545982 - AluJo SINE Alu -1 311 1 288 250 28 0 chr20 26122984 26123056 -40544949 + (CA)n Simple_repeat Simple_repeat 2 75 0 212 335 181 0 chr20 26123514 26123669 -40544336 - MIR SINE MIR -19 243 61 434 264 206 18 chr20 26124100 26124376 -40543629 + LTR16C LTR ERVL 154 481 -10 235 200 12 12 chr20 26124663 26124748 -40543257 + CT-rich Low_complexity Low_complexity 1 85 0 21 0 0 0 chr20 26125287 26125308 -40542697 + AT_rich Low_complexity Low_complexity 1 21 0 2105 138 47 96 chr20 26125588 26126038 -40541967 - MSTA LTR MaLR 0 428 1 1198 120 0 0 chr20 26128041 26128229 -40539776 - AluY SINE Alu 0 312 125 388 323 43 0 chr20 26129243 26129429 -40538576 + MER90 LTR ERV1 419 612 -2 4660 192 32 26 chr20 26130911 26131811 -40536194 + L1MB3 LINE L1 4677 5570 -613 2444 64 0 3 chr20 26131811 26132131 -40535874 + AluY SINE Alu 1 311 0 4660 192 32 26 chr20 26132131 26132203 -40535802 + L1MB3 LINE L1 5570 5640 -543 1972 140 0 29 chr20 26132203 26132511 -40535494 + AluSq SINE Alu 2 300 -13 4660 192 32 26 chr20 26132511 26133034 -40534971 + L1MB3 LINE L1 5640 6181 -2 23 22 0 44 chr20 26134078 26134108 -40533897 + AT_rich Low_complexity Low_complexity 1 30 -13 1920 111 6 117 chr20 26134108 26134458 -40533547 - AluSx SINE Alu -1 311 1 23 22 0 44 chr20 26134458 26134472 -40533533 + AT_rich Low_complexity Low_complexity 30 43 0 434 252 7 7 chr20 26135750 26135889 -40532116 - L1MC4 LINE L1 -1 8041 7903 220 269 34 17 chr20 26135890 26136126 -40531879 + (TA)n Simple_repeat Simple_repeat 1 240 0 1137 233 55 60 chr20 26136128 26136345 -40531660 - L1MC4 LINE L1 -125 7917 7701 2008 190 98 21 chr20 26136345 26136814 -40531191 - MLT1D LTR MaLR 0 505 1 1137 233 55 60 chr20 26136814 26136999 -40531006 - L1MC4 LINE L1 -341 7701 7517 906 246 144 78 chr20 26137204 26137717 -40530288 + MLT1H LTR MaLR 1 547 -2 3180 134 2 0 chr20 26138294 26138734 -40529271 + MER1A DNA MER1_type 1 441 -88 200 271 14 14 chr20 26139067 26139137 -40528868 + (TCCA)n Simple_repeat Simple_repeat 4 73 0 316 325 12 19 chr20 26139142 26139300 -40528705 + CT-rich Low_complexity Low_complexity 1 156 0 249 245 0 0 chr20 26139314 26139416 -40528589 + (TCCA)n Simple_repeat Simple_repeat 4 105 0 571 301 35 18 chr20 26139511 26139737 -40528268 + MIR SINE MIR 10 239 -23 1056 183 37 37 chr20 26140560 26140801 -40527204 - L1ME1 LINE L1 -12 6154 5914 307 347 8 0 chr20 26140966 26141090 -40526915 + MIR SINE MIR 40 164 -98 340 238 24 40 chr20 26141232 26141358 -40526647 + MIR SINE MIR 95 218 -44 6398 225 68 34 chr20 26141513 26143809 -40524196 - L1MB7 LINE L1 -28 6654 4439 2157 108 0 0 chr20 26143809 26144086 -40523919 - AluSc SINE Alu -8 301 25 6398 225 68 34 chr20 26144086 26144107 -40523898 - L1MB7 LINE L1 -2243 4439 4420 2471 92 0 0 chr20 26144107 26144413 -40523592 - AluSg1 SINE Alu -3 306 1 6398 225 68 34 chr20 26144413 26146430 -40521575 - L1MB7 LINE L1 -2262 4420 2 185 180 20 0 chr20 26147889 26147939 -40520066 + G-rich Low_complexity Low_complexity 1 51 0 1102 126 79 0 chr20 26149248 26149438 -40518567 - MSTA-int LTR MaLR -1446 205 1 2196 171 63 19 chr20 26149438 26149848 -40518157 - MSTA LTR MaLR 0 428 1 828 244 111 22 chr20 26149852 26150123 -40517882 + MLT1E1 LTR MaLR 359 653 -1 235 343 67 0 chr20 26150626 26150731 -40517274 + MIR SINE MIR 33 144 -118 447 231 0 0 chr20 26151396 26151556 -40516449 + (TG)n Simple_repeat Simple_repeat 2 161 0 425 376 86 0 chr20 26151608 26151818 -40516187 - MIR SINE MIR -21 241 14 695 263 16 0 chr20 26151823 26152009 -40515996 - MER5A DNA MER1_type 0 189 1 1241 196 93 63 chr20 26152637 26152908 -40515097 - MER31B LTR ERV1 -77 389 102 2165 107 0 10 chr20 26152908 26153218 -40514787 - AluSc SINE Alu -2 307 1 1241 196 93 63 chr20 26153218 26153324 -40514681 - MER31B LTR ERV1 -364 102 1 799 248 118 4 chr20 26154139 26154385 -40513620 - LTR16A LTR ERVL -3 447 174 274 218 113 60 chr20 26154590 26154723 -40513282 + L2 LINE L2 3162 3301 -12 238 221 71 97 chr20 26155747 26155860 -40512145 + L1ME4a LINE L1 5619 5728 -393 287 181 117 32 chr20 26156077 26156171 -40511834 + L1ME4a LINE L1 6001 6102 -19 257 296 102 9 chr20 26157187 26157295 -40510710 + MIR3 SINE MIR 6 123 -85 * 259 289 67 22 chr20 26157291 26157381 -40510624 + MIR SINE MIR 163 256 -6 955 232 42 38 chr20 26158951 26159188 -40508817 + MIR SINE MIR 15 252 -10 188 267 27 27 chr20 26159325 26159400 -40508605 + MIR3 SINE MIR 124 198 -10 1346 183 40 4 chr20 26160009 26160282 -40507723 - AluJo SINE Alu -6 306 24 236 405 53 8 chr20 26160706 26160837 -40507168 - MER5B DNA MER1_type -35 143 7 5105 193 49 11 chr20 26160895 26162404 -40505601 - L1MC1 LINE L1 -6 6327 4756 3005 231 58 24 chr20 26162688 26163038 -40504967 - L1MCa LINE L1 -5004 1041 704 1590 78 181 30 chr20 26163038 26163308 -40504697 - AluY SINE Alu 0 311 1 3005 231 58 24 chr20 26163308 26164008 -40503997 - L1MCa LINE L1 -5341 704 4 * 4080 185 68 41 chr20 26164006 26164957 -40503048 - L1MC3 LINE L1 -293 7492 6516 248 233 38 38 chr20 26164957 26165090 -40502915 + Zaphod DNA AcHobo 837 969 -3062 1131 221 35 90 chr20 26165152 26165418 -40502587 + Zaphod DNA AcHobo 3601 3880 -151 1568 202 0 0 chr20 26165418 26165720 -40502285 + AluJo SINE Alu 7 308 -4 198 71 0 0 chr20 26165722 26165750 -40502255 + (CA)n Simple_repeat Simple_repeat 2 29 0 1131 221 35 90 chr20 26165750 26165936 -40502069 + Zaphod DNA AcHobo 3881 4031 0 1938 124 14 0 chr20 26166183 26166474 -40501531 + AluSg SINE Alu 1 295 -15 254 297 69 10 chr20 26166632 26166733 -40501272 + L2 LINE L2 2651 2757 -557 3743 110 22 73 chr20 26167691 26168195 -40499810 + LTR9 LTR ERV1 1 466 -146 2410 74 0 0 chr20 26168195 26168504 -40499501 - AluY SINE Alu 0 311 3 3743 110 22 73 chr20 26168504 26168644 -40499361 + LTR9 LTR ERV1 466 612 0 2083 182 87 53 chr20 26168792 26169456 -40498549 - LTR26E LTR ERV1 0 622 1 33 25 0 0 chr20 26169741 26169781 -40498224 + AT_rich Low_complexity Low_complexity 1 40 0 184 342 114 0 chr20 26169851 26169930 -40498075 + L3 LINE CR1 1484 1571 -6 206 323 0 0 chr20 26171656 26171721 -40496284 - L2 LINE L2 -667 2647 2583 190 268 95 115 chr20 26171730 26171961 -40496044 + MIR SINE MIR 16 247 -15 201 222 0 0 chr20 26171978 26172014 -40495991 + (CA)n Simple_repeat Simple_repeat 2 37 0 1719 117 24 87 chr20 26172351 26172684 -40495321 - AluSx SINE Alu 0 312 1 233 254 56 48 chr20 26173240 26173366 -40494639 + MER65A LTR ERV1 1 127 -318 21 0 0 0 chr20 26173415 26173436 -40494569 + AT_rich Low_complexity Low_complexity 1 21 0 1422 222 106 0 chr20 26173865 26174167 -40493838 + Tigger7 DNA MER2_type 11 344 -389 465 213 43 0 chr20 26174184 26174278 -40493727 + Tigger7 DNA MER2_type 2490 2587 0 289 198 58 23 chr20 26174280 26174366 -40493639 - L1MC/D LINE L1 -491 5868 5780 342 178 337 10 chr20 26174921 26175022 -40492983 + MER91C DNA MER1_type 1 134 -6 336 242 0 0 chr20 26175329 26175391 -40492614 + Tigger7 DNA MER2_type 2430 2491 0 295 230 62 18 chr20 26175391 26175504 -40492501 - L1MC/D LINE L1 -490 5869 5752 183 316 53 0 chr20 26176701 26176777 -40491228 + L2 LINE L2 2550 2629 -685 391 262 126 43 chr20 26177888 26178340 -40489665 - MLT1H LTR MaLR -22 533 51 1195 257 152 30 chr20 26180423 26180541 -40487464 + L1MB5 LINE L1 5329 5431 -743 291 71 0 0 chr20 26180541 26180583 -40487422 + (CA)n Simple_repeat Simple_repeat 2 43 0 1195 257 152 30 chr20 26180583 26181194 -40486811 + L1MB5 LINE L1 5431 6166 -8 2292 98 0 16 chr20 26181839 26182157 -40485848 + AluSq SINE Alu 1 313 0 436 320 172 9 chr20 26183881 26184245 -40483760 + L1M4 LINE L1 2972 3402 -2744 680 279 73 15 chr20 26184380 26184584 -40483421 - MIR SINE MIR -19 243 28 964 295 77 35 chr20 26184667 26184798 -40483207 + L1M4 LINE L1 3630 3754 -2392 2192 169 0 3 chr20 26184798 26185147 -40482858 + MER7A DNA MER2_type 1 346 0 964 295 77 35 chr20 26185147 26185990 -40482015 + L1M4 LINE L1 3754 4645 -1501 273 192 34 0 chr20 26186862 26186940 -40481065 - MIR SINE MIR -62 146 100 386 256 10 56 chr20 26187774 26187915 -40480090 + MIR SINE MIR 30 157 -86 335 202 395 0 chr20 26188192 26188311 -40479694 + MER5A DNA MER1_type 17 182 -7 225 275 210 7 chr20 26188342 26188480 -40479525 - MER5B DNA MER1_type -8 170 5 3939 80 37 4 chr20 26188940 26189476 -40478529 + MER41A LTR ERV1 1 554 0 246 270 14 0 chr20 26189714 26189788 -40478217 + (CA)n Simple_repeat Simple_repeat 2 76 0 1903 117 3 3 chr20 26189938 26190316 -40477689 + AluSq SINE Alu 1 378 0 22 0 0 0 chr20 26190539 26190561 -40477444 + AT_rich Low_complexity Low_complexity 1 22 0 3297 120 49 59 chr20 26190570 26191178 -40476827 - MER51C LTR ERV1 0 640 1 194 308 192 33 chr20 26191219 26191339 -40476666 + MIR3 SINE MIR 58 196 -12 298 345 107 6 chr20 26191492 26191660 -40476345 + MIR3 SINE MIR 20 204 -4 227 278 205 60 chr20 26192773 26192924 -40475081 + MER5A DNA MER1_type 17 189 0 622 270 86 17 chr20 26193218 26193451 -40474554 + MIR SINE MIR 14 262 0 219 336 88 16 chr20 26193948 26194073 -40473932 + MIR SINE MIR 59 192 -70 530 280 79 15 chr20 26194750 26195190 -40472815 + MER90 LTR ERV1 71 613 -1 224 371 111 25 chr20 26195258 26195770 -40472235 - L2 LINE L2 -457 2857 2302 197 161 89 36 chr20 26195976 26196032 -40471973 + MIR SINE MIR 90 148 -114 276 77 0 0 chr20 26199828 26199867 -40468138 + (TG)n Simple_repeat Simple_repeat 1 39 0 480 238 37 129 chr20 26199913 26200207 -40467798 + LTR16A1 LTR ERVL 11 277 -180 1500 239 50 37 chr20 26200221 26200682 -40467323 - MLT1H1 LTR MaLR -2 553 87 1035 145 48 0 chr20 26200685 26200871 -40467134 + L1PA15 LINE L1 5141 5335 -811 4579 136 23 3 chr20 26200876 26201609 -40466396 + L1PA15 LINE L1 5416 6163 -2 315 247 26 0 chr20 26201610 26201687 -40466318 - MLT1H1 LTR MaLR -486 104 26 551 219 103 13 chr20 26201697 26201852 -40466153 + LTR16A1 LTR ERVL 286 454 -3 2379 158 18 98 chr20 26201974 26202473 -40465532 - LTR32 LTR ERVL 0 471 13 411 261 185 62 chr20 26202472 26202828 -40465177 + MLT1L LTR MaLR 209 608 -7 * 498 287 32 45 chr20 26203541 26203788 -40464217 - LTR16C LTR ERVL 0 491 248 2065 154 92 15 chr20 26203836 26204226 -40463779 + LTR24 LTR ERV1 10 429 -38 4597 177 26 22 chr20 26204265 26205121 -40462884 - MER4D LTR ERV1 -8 895 34 3909 158 6 2 chr20 26205121 26205753 -40462252 - MER41B LTR ERV1 0 635 1 4597 177 26 22 chr20 26205753 26205788 -40462217 - MER4D LTR ERV1 -869 34 1 302 93 0 0 chr20 26205788 26205831 -40462174 + LTR24 LTR ERV1 425 467 0 2722 147 14 0 chr20 26205834 26206256 -40461749 - MSTA LTR MaLR 0 428 1 1072 168 66 168 chr20 26206500 26206987 -40461018 + LTR23 LTR ERV1 1 437 0 1350 264 53 24 chr20 26207332 26207782 -40460223 + HAL1 LINE L1 1475 1937 -570 1047 223 9 24 chr20 26207816 26208027 -40459978 - MER58A DNA MER1_type -15 209 2 741 266 74 41 chr20 26208052 26208390 -40459615 + HAL1 LINE L1 1987 2335 -172 453 228 191 99 chr20 26208498 26208853 -40459152 + MER115 DNA AcHobo 210 597 -96 249 235 118 0 chr20 26209467 26209552 -40458453 - MIR SINE MIR -82 180 86 607 224 80 40 chr20 26210525 26210726 -40457279 + MER3 DNA MER1_type 1 209 0 232 214 0 0 chr20 26212425 26212481 -40455524 - MER5A DNA MER1_type -108 81 26 243 270 68 0 chr20 26213677 26213751 -40454254 - LTR16C LTR ERVL -136 355 277 935 223 76 45 chr20 26213785 26214140 -40453865 + MLT1B LTR MaLR 1 366 -24 3136 211 164 22 chr20 26215015 26215959 -40452046 - LTR28 LTR ERV1 -4 1016 1 21 36 0 0 chr20 26216315 26216343 -40451662 + AT_rich Low_complexity Low_complexity 1 28 0 302 302 10 0 chr20 26217019 26217115 -40450890 + MIR SINE MIR 76 172 -90 491 328 104 18 chr20 26218530 26218868 -40449137 + LTR16C LTR ERVL 125 491 0 265 225 162 0 chr20 26219226 26219337 -40448668 - MIR3 SINE MIR -49 159 31 664 157 0 35 chr20 26219426 26219541 -40448464 + FLAM_A SINE Alu 26 136 -6 197 81 0 27 chr20 26220128 26220165 -40447840 + (TTTTTG)n Simple_repeat Simple_repeat 1 36 0 26 0 0 0 chr20 26220905 26220931 -40447074 + AT_rich Low_complexity Low_complexity 1 26 0 1199 230 98 9 chr20 26222851 26223280 -40444725 - MLT1G1 LTR MaLR 0 555 1 359 364 77 14 chr20 26224719 26224939 -40443066 + ERVL LTR ERVL 2020 2253 -3511 386 230 106 6 chr20 26226196 26226357 -40441648 + LTR16C LTR ERVL 252 428 -63 216 250 0 0 chr20 26230928 26230992 -40437013 + GA-rich Low_complexity Low_complexity 1 64 0 234 140 53 35 chr20 26231294 26231351 -40436654 - MLT1G3 LTR MaLR -14 516 459 698 283 0 0 chr20 26231721 26231905 -40436100 - L1PB4 LINE L1 -1 6155 5972 1232 218 97 12 chr20 26231917 26232137 -40435868 - L1 LINE L1 -3466 2680 2480 306 0 0 0 chr20 26232137 26232171 -40435834 + (TG)n Simple_repeat Simple_repeat 2 35 0 198 91 0 0 chr20 26232170 26232203 -40435802 + (TA)n Simple_repeat Simple_repeat 1 33 0 * 1232 218 97 12 chr20 26232171 26232312 -40435693 - L1 LINE L1 -3666 2480 2323 501 284 109 0 chr20 26233526 26233709 -40434296 + LTR16A1 LTR ERVL 255 457 0 1207 281 123 20 chr20 26233969 26234524 -40433481 - MER115 DNA AcHobo 0 693 20 301 305 62 0 chr20 26234539 26234667 -40433338 + MIR3 SINE MIR 68 203 -5 14231 144 24 19 chr20 26236269 26238676 -40429329 + Tigger1 DNA MER2_type 1 2418 0 219 250 0 0 chr20 26239691 26239751 -40428254 + A-rich Low_complexity Low_complexity 1 60 0 2549 158 18 27 chr20 26240130 26240619 -40427386 + MER31A LTR ERV1 1 485 0 288 308 38 30 chr20 26241613 26241746 -40426259 + L2 LINE L2 3139 3272 0 950 250 119 84 chr20 26242046 26242734 -40425271 - L1ME3A LINE L1 -1 6169 5458 4817 194 49 22 chr20 26242737 26243493 -40424512 - L1MD1 LINE L1 0 6636 5901 2751 154 35 37 chr20 26243493 26243980 -40424025 + MER66B LTR ERV1 1 486 0 4817 194 49 22 chr20 26243980 26244461 -40423544 - L1MD1 LINE L1 -735 5901 5378 1897 121 4 8 chr20 26244461 26244758 -40423247 - AluSg SINE Alu 0 310 30 4817 194 49 22 chr20 26244758 26244803 -40423202 - L1MD1 LINE L1 -1258 5378 5336 571 270 62 24 chr20 26244804 26245093 -40422912 - L1MD1 LINE L1 -2401 4139 3840 1105 133 0 17 chr20 26245105 26245278 -40422727 - Tigger7 DNA MER2_type -6 2485 2316 5148 230 89 31 chr20 26245308 26247468 -40420537 - L1MD1 LINE L1 -2836 3704 1671 240 86 0 0 chr20 26247468 26247503 -40420502 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 5148 230 89 31 chr20 26247503 26248248 -40419757 - L1MD1 LINE L1 -4869 1671 971 1940 199 34 10 chr20 26248248 26248660 -40419345 - L1MB2 LINE L1 -4 6167 5746 5148 230 89 31 chr20 26248660 26248962 -40419043 - L1MD1 LINE L1 -5569 971 2 1506 279 44 17 chr20 26250218 26250744 -40417261 - MLT1H1 LTR MaLR -7 548 9 864 215 42 77 chr20 26251176 26251436 -40416569 - MLT1A2 LTR MaLR -119 255 5 198 71 0 0 chr20 26251493 26251521 -40416484 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 240 114 0 0 chr20 26252771 26252806 -40415199 + MIR SINE MIR 215 249 -13 215 203 279 0 chr20 26253487 26253566 -40414439 + L2 LINE L2 1803 1903 -1411 738 319 93 28 chr20 26253623 26254094 -40413911 + L2 LINE L2 2323 2824 -490 1021 235 86 52 chr20 26254099 26254619 -40413386 + MLT1F LTR MaLR 8 538 -4 766 310 65 36 chr20 26254630 26255017 -40412988 + L2 LINE L2 2862 3259 -54 503 212 82 27 chr20 26255114 26255260 -40412745 + MLT1H1 LTR MaLR 402 555 0 276 29 0 0 chr20 26256550 26256584 -40411421 + AluY SINE Alu 8 41 -260 360 319 43 14 chr20 26256618 26256759 -40411246 - MIR SINE MIR -65 197 53 1834 152 3 3 chr20 26257259 26257569 -40410436 + AluJo SINE Alu 1 310 0 674 211 86 0 chr20 26258424 26258576 -40409429 + MER5B DNA MER1_type 1 165 -13 409 236 32 32 chr20 26258577 26258700 -40409305 - MER5A DNA MER1_type 0 189 67 312 221 258 6 chr20 26258944 26259107 -40408898 - LTR37A LTR ERV1 -2 424 221 231 179 104 0 chr20 26259074 26259141 -40408864 - LTR37B LTR ERV1 -172 296 223 * 1391 112 0 115 chr20 26259322 26259608 -40408397 - AluY SINE Alu -4 307 55 23 33 0 0 chr20 26260028 26260058 -40407947 + AT_rich Low_complexity Low_complexity 1 30 0 3126 178 7 1 chr20 26260241 26260937 -40407068 - L1P4 LINE L1 -719 5446 4747 827 324 82 9 chr20 26260998 26261573 -40406432 - L1M4 LINE L1 -1941 4205 3589 824 285 83 21 chr20 26261745 26262481 -40405524 - L1M4 LINE L1 -3082 3064 2277 3524 207 55 14 chr20 26262500 26263307 -40404698 - L1MC3 LINE L1 -346 7439 6600 368 246 12 12 chr20 26263394 26263561 -40404444 + (TA)n Simple_repeat Simple_repeat 1 167 0 237 183 0 67 chr20 26263581 26263641 -40404364 + L1MC4 LINE L1 6648 6703 -1339 255 350 21 0 chr20 26263648 26263745 -40404260 + (CATA)n Simple_repeat Simple_repeat 3 101 0 1815 239 101 74 chr20 26263745 26264763 -40403242 - L1MC3 LINE L1 -1139 6646 5601 3572 216 33 16 chr20 26264774 26265695 -40402310 - L1MB8 LINE L1 -1 6177 5240 3090 225 16 12 chr20 26265695 26266336 -40401669 - MER82 DNA MER2_type 0 653 11 538 263 48 0 chr20 26266347 26266533 -40401472 - L1MB8 LINE L1 -905 5241 5047 452 191 45 0 chr20 26266539 26266628 -40401377 + MLT2B1 LTR ERVL 425 517 -3 963 256 97 22 chr20 26266652 26266973 -40401032 + ERVL-B1 LTR ERVL 27 371 -5393 805 281 35 17 chr20 26266965 26267196 -40400809 - ERVL LTR ERVL -5192 572 338 * 16347 182 26 11 chr20 26267160 26270068 -40397937 + ERVL LTR ERVL 2122 5074 -690 2990 264 77 6 chr20 26270118 26271238 -40396767 - L1MB8 LINE L1 -2771 3375 2177 2329 106 0 0 chr20 26272257 26272558 -40395447 + AluSc SINE Alu 1 301 -8 322 250 54 36 chr20 26273507 26273619 -40394386 - MLT1J LTR MaLR 0 511 398 396 282 69 0 chr20 26273829 26273960 -40394045 - MLT1J LTR MaLR -369 142 3 2068 135 0 0 chr20 26274619 26274915 -40393090 + AluSg SINE Alu 2 297 -13 1844 189 61 0 chr20 26275002 26275330 -40392675 - MER7A DNA MER2_type 0 346 1 1763 125 64 0 chr20 26276771 26277074 -40390931 - AluSx SINE Alu 0 320 1 737 222 31 46 chr20 26280552 26280746 -40387259 + MLT2B2 LTR ERVL 14 204 -311 631 230 91 0 chr20 26280802 26280967 -40387038 + MLT1H LTR MaLR 3 182 -367 253 289 75 31 chr20 26281643 26281743 -40386262 + MIR SINE MIR 87 198 -64 186 43 0 0 chr20 26281743 26281766 -40386239 + (CATATA)n Simple_repeat Simple_repeat 4 26 0 253 289 75 31 chr20 26281766 26281824 -40386181 + MIR SINE MIR 198 252 -10 210 37 0 0 chr20 26281857 26281884 -40386121 + (CAA)n Simple_repeat Simple_repeat 2 28 0 462 159 0 92 chr20 26282049 26282244 -40385761 + (TG)n Simple_repeat Simple_repeat 2 178 0 358 194 0 67 chr20 26282283 26282672 -40385333 + (TG)n Simple_repeat Simple_repeat 1 362 0 474 151 6 47 chr20 26282715 26282887 -40385118 + (TG)n Simple_repeat Simple_repeat 2 166 0 886 161 12 36 chr20 26284245 26284413 -40383592 - MLT1A1 LTR MaLR 0 365 202 2925 184 94 7 chr20 26284414 26285012 -40382993 - LTR34 LTR ERV1 -1 698 49 402 21 0 0 chr20 26285034 26285081 -40382924 + (TA)n Simple_repeat Simple_repeat 1 47 0 3146 58 5 0 chr20 26285084 26285460 -40382545 - L1PA8 LINE L1 -13 6159 5782 481 248 16 39 chr20 26285579 26285708 -40382297 - MLT1A1 LTR MaLR -302 126 1 455 269 132 55 chr20 26286475 26286802 -40381203 + L1M4c LINE L1 525 876 -5508 1759 163 118 138 chr20 26286807 26287483 -40380522 - MER4A LTR ERV1 -1 663 1 1483 276 5 5 chr20 26287497 26287928 -40380077 + L1M4c LINE L1 2535 2965 -3417 2607 184 86 60 chr20 26288006 26288114 -40379891 + MER21A LTR ERV1 12 116 -747 276 30 0 0 chr20 26288114 26288147 -40379858 + (TC)n Simple_repeat Simple_repeat 2 34 0 2607 184 86 60 chr20 26288147 26288809 -40379196 + MER21A LTR ERV1 116 860 -3 279 245 78 0 chr20 26288815 26288917 -40379088 + L1M4c LINE L1 2959 3068 -3314 5845 181 16 47 chr20 26288929 26289108 -40378897 + L1MC1 LINE L1 185 368 -6058 937 226 146 49 chr20 26289108 26289498 -40378507 + MSTC LTR MaLR 1 428 0 5845 181 16 47 chr20 26289498 26290540 -40377465 + L1MC1 LINE L1 368 1368 -5058 3162 116 22 45 chr20 26290537 26290745 -40377260 + L1P LINE L1 2634 2845 -3301 * 2316 119 0 0 chr20 26290745 26291055 -40376950 + AluSg SINE Alu 1 310 0 3162 116 22 45 chr20 26291055 26291397 -40376608 + L1P LINE L1 2845 3171 -2975 17851 92 10 2 chr20 26291397 26293777 -40374228 - MER57A-int LTR ERV1 -394 7143 4745 5633 148 127 95 chr20 26293780 26295426 -40372579 - pTR5 LTR ERV1 0 2438 741 * 9761 113 57 11 chr20 26295417 26296946 -40371059 - MER57A-int LTR ERV1 -2781 4756 3157 8060 128 15 25 chr20 26296942 26298204 -40369801 - MER57A-int LTR ERV1 -4583 2954 1705 * 8230 141 21 10 chr20 26298198 26299452 -40368553 - MER57A-int LTR ERV1 -6269 1268 1 2214 168 15 5 chr20 26299452 26299851 -40368154 - MER57A LTR ERV1 0 403 1 5058 239 48 18 chr20 26299895 26302130 -40365875 + L1MC1 LINE L1 2053 4357 -2069 1107 231 151 9 chr20 26302134 26302597 -40365408 + L1MC1 LINE L1 4544 5072 -1354 2052 118 0 0 chr20 26302602 26302921 -40365084 + AluSg SINE Alu 1 319 0 5668 152 33 8 chr20 26302921 26304007 -40363998 + L1MC1 LINE L1 5481 6594 -19 4045 220 94 25 chr20 26304023 26306264 -40361741 + L1MB4 LINE L1 3775 6179 -1 279 337 11 0 chr20 26306704 26306793 -40361212 + MIR SINE MIR 61 150 -112 317 222 76 83 chr20 26307099 26307243 -40360762 + MLT1H LTR MaLR 383 525 -24 819 260 11 6 chr20 26307339 26307520 -40360485 - MER5A DNA MER1_type -6 183 2 193 365 66 12 chr20 26307905 26308072 -40359933 + MIR SINE MIR 81 256 -6 309 74 74 25 chr20 26308299 26308420 -40359585 + (TA)n Simple_repeat Simple_repeat 2 128 0 2017 117 10 7 chr20 26308482 26308772 -40359233 + AluSc SINE Alu 1 291 -18 329 273 66 0 chr20 26308805 26308926 -40359079 + L1M4 LINE L1 2177 2305 -3841 292 297 42 21 chr20 26309337 26309529 -40358476 - MER105 DNA DNA 0 204 9 991 98 0 0 chr20 26310733 26310856 -40357149 - AluSq/x SINE Alu -188 125 3 22 0 0 0 chr20 26311003 26311025 -40356980 + AT_rich Low_complexity Low_complexity 1 22 0 225 182 0 0 chr20 26311042 26311086 -40356919 + MER65A LTR ERV1 1 44 -401 1454 177 28 7 chr20 26311121 26311403 -40356602 + MER65A LTR ERV1 44 331 -114 648 188 125 0 chr20 26311395 26311539 -40356466 + U1 snRNA snRNA 3 164 -1 * 34 0 0 0 chr20 26311540 26311574 -40356431 + AT_rich Low_complexity Low_complexity 1 34 0 532 188 60 23 chr20 26311575 26311608 -40356397 + MER65A LTR ERV1 308 338 -107 359 21 21 0 chr20 26311608 26311656 -40356349 + (CA)n Simple_repeat Simple_repeat 2 50 0 532 188 60 23 chr20 26311656 26311755 -40356250 + MER65A LTR ERV1 338 445 0 472 293 148 34 chr20 26311999 26312385 -40355620 - L1MC4a LINE L1 -1845 5963 5534 301 319 92 32 chr20 26312457 26312642 -40355363 - L1MC4a LINE L1 -1887 4259 4064 216 288 55 0 chr20 26313313 26313386 -40354619 - MIR SINE MIR -112 150 74 509 132 0 0 chr20 26314730 26314806 -40353199 - AluSg/x SINE Alu -37 273 198 308 319 92 32 chr20 26314832 26315017 -40352988 - L1M4 LINE L1 -1887 4259 4064 885 167 160 6 chr20 26315038 26315194 -40352811 - AluSx SINE Alu -131 181 2 1657 115 4 0 chr20 26315592 26315845 -40352160 - L1PA13 LINE L1 -3 6160 5907 561 234 0 0 chr20 26317031 26317189 -40350816 + (CA)n Simple_repeat Simple_repeat 1 158 0 22 0 0 0 chr20 26317584 26317606 -40350399 + AT_rich Low_complexity Low_complexity 1 22 0 713 258 68 114 chr20 26318256 26318891 -40349114 + MER77 LTR ERV1 79 651 -7 2219 231 48 63 chr20 26320125 26320858 -40347147 + MER72 LTR ERV1 1 722 0 226 276 28 117 chr20 26321275 26321420 -40346585 - MIR3 SINE MIR -64 144 13 186 125 0 0 chr20 26321793 26321815 -40346190 + (TCTCCC)n Simple_repeat Simple_repeat 5 29 -7 2205 128 31 17 chr20 26321815 26322174 -40345831 + THE1B LTR MaLR 1 364 0 186 125 0 0 chr20 26322174 26322183 -40345822 + (TCTCCC)n Simple_repeat Simple_repeat 28 36 0 6160 212 59 41 chr20 26322566 26324785 -40343220 + L1MDa LINE L1 21 2453 -4087 2847 142 86 7 chr20 26324805 26325409 -40342596 + L1 LINE L1 4386 5037 -1109 433 270 54 0 chr20 26325413 26325598 -40342407 + L1MDa LINE L1 2962 3156 -3384 474 286 78 8 chr20 26325602 26325857 -40342148 + L1MDa LINE L1 3603 3875 -2665 966 219 62 17 chr20 26325876 26326228 -40341777 + L1MDa LINE L1 4025 4392 -2148 440 214 0 0 chr20 26326245 26326348 -40341657 + L1MC4a LINE L1 2266 2368 -3778 303 296 191 20 chr20 26326829 26326981 -40341024 + L1MC4a LINE L1 3590 3767 -2379 556 258 82 77 chr20 26327048 26327439 -40340566 + L1MC4a LINE L1 5536 5928 -1880 208 47 16 109 chr20 26327615 26327679 -40340326 + (TTAAG)n Simple_repeat Simple_repeat 3 60 0 461 320 101 30 chr20 26327687 26328015 -40339990 + L1MC4a LINE L1 6114 6464 -1344 371 291 62 19 chr20 26328190 26328400 -40339605 + L1MC4 LINE L1 6829 7047 -995 298 294 91 3 chr20 26328566 26328826 -40339179 + L1MC4 LINE L1 7064 7396 -492 490 199 64 0 chr20 26328849 26329005 -40339000 + L1MC5 LINE L1 7276 7441 -520 2165 133 7 0 chr20 26329514 26329823 -40338182 + AluSx SINE Alu 1 311 -1 320 228 0 0 chr20 26329855 26329912 -40338093 + MER5A DNA MER1_type 10 66 -123 954 307 46 10 chr20 26330091 26330479 -40337526 - LTR16C LTR ERVL -1 490 89 423 267 0 0 chr20 26333167 26333257 -40334748 + MER81 DNA DNA 10 99 -15 252 272 25 25 chr20 26334233 26334314 -40333691 - L2 LINE L2 -8 3305 3225 742 272 32 35 chr20 26336318 26336631 -40331374 + LTR16C LTR ERVL 179 490 -1 346 320 82 17 chr20 26336780 26337011 -40330994 + L1 LINE L1 4177 4422 -1724 3792 93 21 12 chr20 26337272 26337842 -40330163 - L1PA16 LINE L1 -9 6157 5583 559 84 0 0 chr20 26338220 26338303 -40329702 - MLT2A2 LTR ERVL 0 453 371 229 289 22 0 chr20 26338974 26339064 -40328941 - MER94 DNA DNA -42 92 1 208 232 87 73 chr20 26339433 26339518 -40328487 - MIR SINE MIR -111 97 11 439 320 141 0 chr20 26340673 26340879 -40327126 + MIR SINE MIR 16 250 -12 301 244 0 24 chr20 26341233 26341315 -40326690 - L1MC4 LINE L1 -1339 6703 6624 704 224 49 26 chr20 26341709 26341973 -40326032 - L1MCa LINE L1 -1464 4962 4693 4363 137 16 0 chr20 26341973 26342666 -40325339 + L1PA15 LINE L1 5460 6163 -2 2291 242 46 39 chr20 26342675 26342846 -40325159 - L1MCa LINE L1 -2536 3890 3722 2366 106 0 0 chr20 26342846 26343158 -40324847 - AluSx SINE Alu 0 312 1 2291 242 46 39 chr20 26343158 26343684 -40324321 - L1MCa LINE L1 -2704 3722 3181 2457 88 0 0 chr20 26343684 26343990 -40324015 - AluSg SINE Alu -4 306 1 2291 242 46 39 chr20 26343990 26344335 -40323670 - L1MCa LINE L1 -3245 3181 2840 515 218 22 18 chr20 26344341 26344525 -40323480 - L1MCa LINE L1 -5882 343 1 796 258 69 10 chr20 26344533 26344698 -40323307 - L1MCa LINE L1 -4352 2255 2101 14150 143 21 17 chr20 26344698 26347108 -40320897 - Tigger1 DNA MER2_type 0 2418 1 796 258 69 10 chr20 26347108 26347472 -40320533 - L1MCa LINE L1 -4506 2101 1502 812 202 9 67 chr20 26347477 26347700 -40320305 + LTR52 LTR ERVL 6 215 -206 * 1072 189 16 28 chr20 26347697 26347945 -40320060 + LTR52 LTR ERVL 174 418 -3 1203 231 20 20 chr20 26348148 26348499 -40319506 - L1MCa LINE L1 -5037 1389 1039 1203 166 0 67 chr20 26348504 26348713 -40319292 + AluJb SINE Alu 87 282 -30 199 0 0 0 chr20 26348713 26348735 -40319270 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1203 166 0 67 chr20 26348735 26348748 -40319257 + AluJb SINE Alu 282 294 -18 633 258 11 39 chr20 26348809 26348987 -40319018 - MER5B DNA MER1_type -3 175 3 206 390 7 14 chr20 26349507 26349648 -40318357 - L2 LINE L2 -962 2352 2213 655 230 88 13 chr20 26350843 26351069 -40316936 - L2 LINE L2 -736 2578 2336 392 235 59 47 chr20 26351788 26351958 -40316047 + Charlie4 DNA MER1_type 24 195 -1766 512 231 38 6 chr20 26351973 26352133 -40315872 + Charlie4 DNA MER1_type 1748 1912 -49 227 309 49 0 chr20 26352159 26352240 -40315765 + L2 LINE L2 3188 3272 0 1570 155 69 28 chr20 26352370 26352660 -40315345 - MER66A-int LTR ERV1 -9 6667 6366 * 3377 172 42 71 chr20 26352635 26353537 -40314468 - MER66A-int LTR ERV1 -1735 4941 2411 302 267 0 0 chr20 26353533 26353608 -40314397 - MER66A-int LTR ERV1 -2542 4134 4060 * 347 203 283 7 chr20 26353598 26353736 -40314269 - MER66A-int LTR ERV1 -6244 1876 1701 * 6250 210 43 25 chr20 26353716 26353778 -40314227 - MER66A-int LTR ERV1 -2996 3680 3621 2098 105 0 11 chr20 26353778 26354104 -40313901 - AluSx SINE Alu 0 323 1 6250 210 43 25 chr20 26354104 26355361 -40312644 - MER66A-int LTR ERV1 -3055 3621 2336 * 8775 200 93 28 chr20 26355354 26357384 -40310621 - MER66A-int LTR ERV1 -4512 2164 3 895 177 111 44 chr20 26357428 26357733 -40310272 - MER66A LTR ERV1 -70 408 97 1880 144 67 25 chr20 26358057 26358417 -40309588 - THE1C LTR MaLR 0 375 1 303 146 0 0 chr20 26358422 26358477 -40309528 + (GGGA)n Simple_repeat Simple_repeat 4 58 0 271 360 80 38 chr20 26359232 26359922 -40308083 + L2 LINE L2 2584 3306 -7 733 188 34 0 chr20 26360169 26360318 -40307687 - MER5A DNA MER1_type -35 154 1 3647 128 7 2 chr20 26360597 26361152 -40306853 - L1PA11 LINE L1 -1817 4329 3772 6435 96 19 1 chr20 26361152 26362980 -40305025 + L1PA11 LINE L1 4327 6174 0 2094 18 0 0 chr20 26363108 26363336 -40304669 - AluYa5 SINE Alu -5 306 79 186 43 0 0 chr20 26363397 26363420 -40304585 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1191 157 40 0 chr20 26363602 26363800 -40304205 - LTR39 LTR ERV1 -577 206 1 216 86 0 0 chr20 26364633 26364668 -40303337 + (CA)n Simple_repeat Simple_repeat 2 36 0 3712 176 14 13 chr20 26365635 26366323 -40301682 - L1PA16 LINE L1 -2 6164 5476 299 178 0 0 chr20 26366339 26366384 -40301621 - AluJ/FRAM SINE Alu -29 273 229 914 130 26 1 chr20 26366384 26366556 -40301449 - L1PA16 LINE L1 -675 5490 5299 252 59 0 0 chr20 26371632 26371666 -40296339 + (TG)n Simple_repeat Simple_repeat 2 35 0 194 370 78 7 chr20 26371975 26372129 -40295876 + MIR3 SINE MIR 30 194 -14 3819 203 45 16 chr20 26372663 26373838 -40294167 - L1MB8 LINE L1 0 6989 5788 * 3975 242 37 15 chr20 26373829 26375277 -40292728 - L1MB8 LINE L1 -5344 1515 11 221 291 145 17 chr20 26375930 26376047 -40291958 + MIR3 SINE MIR 12 143 -65 639 130 37 0 chr20 26377206 26377314 -40290691 - L1MA4 LINE L1 -10 6290 6179 295 262 137 38 chr20 26377314 26377497 -40290508 - MIR SINE MIR -48 214 14 283 270 61 71 chr20 26377624 26377820 -40290185 + MIR SINE MIR 69 262 0 210 91 0 0 chr20 26378535 26378568 -40289437 + (GA)n Simple_repeat Simple_repeat 2 34 0 185 352 99 7 chr20 26379272 26379414 -40288591 + L2 LINE L2 2921 3075 -238 354 224 0 0 chr20 26379871 26379956 -40288049 + CT-rich Low_complexity Low_complexity 2 86 0 4124 208 41 26 chr20 26379961 26381703 -40286302 - L1MC3 LINE L1 -743 5403 4457 270 295 13 0 chr20 26382615 26382693 -40285312 - L2 LINE L2 -218 3054 2976 4556 109 9 3 chr20 26382773 26383404 -40284601 + MER41B LTR ERV1 1 635 0 231 281 10 73 chr20 26384960 26385056 -40282949 - L2 LINE L2 0 3272 3183 360 155 0 0 chr20 26385592 26385663 -40282342 + G-rich Low_complexity Low_complexity 2 72 0 188 308 43 34 chr20 26388622 26388739 -40279266 + MIR SINE MIR 17 134 -74 587 238 21 0 chr20 26388798 26388941 -40279064 - MIR SINE MIR -20 242 97 714 195 8 0 chr20 26389044 26389172 -40278833 + FLAM_C SINE Alu 2 130 -3 1539 246 95 92 chr20 26389260 26389828 -40278177 - MLT1H1 LTR MaLR -13 542 13 1448 161 218 0 chr20 26389868 26390166 -40277839 - MER47A DNA MER2_type 0 366 4 299 244 67 0 chr20 26390168 26390258 -40277747 + MER112 DNA MER1_type 133 228 -32 420 195 34 31 chr20 26390321 26390499 -40277506 - L1MA9 LINE L1 -4 6287 5994 1447 167 6 74 chr20 26392401 26392713 -40275292 + AluJo SINE Alu 3 293 -19 731 306 74 16 chr20 26392795 26393118 -40274887 - LTR16C LTR ERVL 0 491 150 1227 229 104 78 chr20 26394006 26394478 -40273527 - MLT1H LTR MaLR 0 549 66 615 198 17 0 chr20 26394505 26394621 -40273384 + MLT1H LTR MaLR 431 548 -1 693 307 109 25 chr20 26394623 26395027 -40272978 - LTR16C LTR ERVL 0 491 54 299 320 38 55 chr20 26395165 26395456 -40272549 - L3b LINE CR1 -187 1396 1111 243 317 62 29 chr20 26395956 26396164 -40271841 + L3 LINE CR1 1188 1402 -175 206 367 61 22 chr20 26396327 26396507 -40271498 + MIR3 SINE MIR 3 189 -19 1336 191 72 0 chr20 26397455 26397750 -40270255 - AluJo SINE Alu 0 314 1 275 321 40 18 chr20 26398990 26399214 -40268791 - L1ME4a LINE L1 -224 5897 5669 845 227 40 82 chr20 26399795 26400099 -40267906 - LTR16C LTR ERVL -51 440 150 1070 192 56 83 chr20 26400618 26401004 -40267001 - MLT2B2 LTR ERVL -52 362 3 24655 164 21 39 chr20 26401006 26401277 -40266728 - ERVL-B2 LTR ERVL -7 5757 5483 1720 165 3 30 chr20 26401277 26401574 -40266431 + AluJb SINE Alu 1 289 -23 24655 164 21 39 chr20 26401574 26405849 -40262156 - ERVL-B2 LTR ERVL -281 5483 1293 643 319 39 4 chr20 26406433 26406662 -40261343 + LTR16C LTR ERVL 255 491 0 2089 200 126 12 chr20 26407886 26408385 -40259620 + L1MC3 LINE L1 6176 6731 -1054 794 246 44 79 chr20 26408428 26408745 -40259260 + MLT1D LTR MaLR 34 339 -166 1030 133 13 286 chr20 26408745 26409025 -40258980 + L1MC3 LINE L1 7283 7276 -509 965 103 23 0 chr20 26409025 26409200 -40258805 + (CA)n Simple_repeat Simple_repeat 1 179 0 1030 133 13 286 chr20 26409200 26409590 -40258415 + L1MC3 LINE L1 7275 7770 -15 3514 146 59 42 chr20 26409594 26410120 -40257885 - L1MA6 LINE L1 -329 5971 5413 1395 167 4 4 chr20 26410120 26410390 -40257615 - L1MA4 LINE L1 -4 6296 6027 3514 146 59 42 chr20 26410390 26410612 -40257393 - L1MA6 LINE L1 -887 5413 5196 1993 146 3 6 chr20 26410613 26410936 -40257069 + L1MA6 LINE L1 5979 6300 0 24 0 0 0 chr20 26412492 26412516 -40255489 + AT_rich Low_complexity Low_complexity 1 24 0 1474 160 71 8 chr20 26412534 26412802 -40255203 + AluJo SINE Alu 12 296 -16 183 356 62 6 chr20 26412815 26412975 -40255030 - MIR SINE MIR -12 250 82 951 280 84 27 chr20 26413412 26414040 -40253965 + L2 LINE L2 2342 3005 -308 365 328 51 6 chr20 26414687 26414864 -40253141 + L2 LINE L2 3114 3298 -15 829 272 129 50 chr20 26415044 26415543 -40252462 - MLT1G3 LTR MaLR 0 595 67 1413 194 31 10 chr20 26415549 26415843 -40252162 + L1MC3 LINE L1 7485 7784 -1 274 254 0 0 chr20 26415848 26415911 -40252094 - MLT1G3 LTR MaLR -532 63 1 686 242 240 28 chr20 26416399 26416857 -40251148 + MLT1H1 LTR MaLR 1 555 0 1974 123 0 0 chr20 26417122 26417398 -40250607 - AluSx SINE Alu -7 305 30 1949 151 0 25 chr20 26417614 26417931 -40250074 - AluJb SINE Alu -3 309 1 7766 160 17 3 chr20 26418088 26420334 -40247671 + L1PA13 LINE L1 3929 6156 -7 24 53 0 0 chr20 26420352 26420390 -40247615 + AT_rich Low_complexity Low_complexity 1 38 0 229 362 82 45 chr20 26420577 26420820 -40247185 - L2 LINE L2 -72 3200 2949 759 226 11 117 chr20 26420964 26421197 -40246808 + MER33 DNA MER1_type 4 187 -2398 1664 160 64 3 chr20 26421197 26421479 -40246526 + AluJb SINE Alu 4 302 -10 759 226 11 117 chr20 26421479 26421603 -40246402 + MER33 DNA MER1_type 187 323 -1 2023 136 7 7 chr20 26422098 26422407 -40245598 - AluSx SINE Alu -3 309 1 2609 59 0 0 chr20 26422892 26423198 -40244807 + AluY SINE Alu 1 306 -5 2064 105 3 40 chr20 26423201 26423523 -40244482 + AluSq SINE Alu 1 311 0 280 264 109 9 chr20 26423560 26423670 -40244335 - MIR SINE MIR -64 198 78 1312 260 39 39 chr20 26424461 26424849 -40243156 + MSTD LTR MaLR 1 388 -8 265 100 0 25 chr20 26424858 26424898 -40243107 + MSTD-int LTR MaLR 5 43 -1328 256 224 13 13 chr20 26424908 26424984 -40243021 + L1MA7 LINE L1 6214 6289 -2 415 330 43 54 chr20 26426996 26427392 -40240613 - L1M4 LINE L1 -1808 4338 3946 297 0 0 0 chr20 26427392 26427425 -40240580 + (CA)n Simple_repeat Simple_repeat 2 34 0 415 330 43 54 chr20 26427425 26427494 -40240511 - L1M4 LINE L1 -2200 3946 3878 1240 157 72 110 chr20 26427540 26427859 -40240146 - AluJb SINE Alu -5 307 1 269 273 0 0 chr20 26428376 26428453 -40239552 - L1M4 LINE L1 -3132 3014 2938 1512 183 21 21 chr20 26428480 26428770 -40239235 - AluJb SINE Alu -22 290 1 3928 168 50 28 chr20 26431652 26432397 -40235608 - LTR39 LTR ERV1 -22 761 1 469 290 102 29 chr20 26432719 26432964 -40235041 - L1ME1 LINE L1 -5 6161 5899 1495 232 24 42 chr20 26432972 26433382 -40234623 - L1ME1 LINE L1 -317 5847 5445 201 333 26 48 chr20 26433597 26433828 -40234177 - L2 LINE L2 -181 3091 2866 193 239 0 0 chr20 26433942 26433988 -40234017 + L2 LINE L2 3268 3313 0 184 296 185 19 chr20 26434357 26434465 -40233540 - L2 LINE L2 -5 3267 3142 2131 150 18 0 chr20 26434488 26434828 -40233177 + L1PA16 LINE L1 5812 6157 -9 590 39 0 13 chr20 26434835 26434913 -40233092 + (GGAAA)n Simple_repeat Simple_repeat 3 79 0 744 284 37 21 chr20 26435335 26435725 -40232280 - MLT1H1 LTR MaLR 0 555 115 416 270 77 40 chr20 26436149 26436371 -40231634 - L1ME3 LINE L1 -149 6013 5784 732 344 50 3 chr20 26436551 26436914 -40231091 + LTR16C LTR ERVL 106 485 -6 252 0 0 0 chr20 26437058 26437086 -40230919 + (TG)n Simple_repeat Simple_repeat 2 29 0 2099 119 7 23 chr20 26437737 26438039 -40229966 + AluSx SINE Alu 2 298 -14 1141 276 141 34 chr20 26438040 26438698 -40229307 + L1ME3A LINE L1 5276 6006 -164 236 218 0 39 chr20 26439110 26439188 -40228817 - L1ME3 LINE L1 -965 5181 5107 317 273 53 8 chr20 26443538 26443670 -40224335 + MIR SINE MIR 5 142 -120 1384 198 101 28 chr20 26443775 26444211 -40223794 - Charlie1 DNA MER1_type -24 2737 3 1229 262 146 8 chr20 26446043 26446528 -40221477 - MER69 DNA AcHobo -8 2518 1967 3052 157 31 15 chr20 26447485 26448008 -40219997 - LTR26B LTR ERV1 0 531 1 310 195 0 49 chr20 26448074 26448156 -40219849 + L1ME1 LINE L1 5785 5862 -304 847 273 50 8 chr20 26448165 26448425 -40219580 - L1M4b LINE L1 -6577 282 12 225 303 147 0 chr20 26448913 26449022 -40218983 - L1 LINE L1 -2313 3833 3709 382 325 60 8 chr20 26449089 26449338 -40218667 - L1 LINE L1 -3506 2640 2379 926 208 43 31 chr20 26450225 26450480 -40217525 + L1MC4a LINE L1 7152 7409 -399 1609 274 54 53 chr20 26450613 26451416 -40216589 - L1ME3 LINE L1 -98 6064 5254 197 193 0 18 chr20 26451427 26451484 -40216521 + (TA)n Simple_repeat Simple_repeat 2 57 0 228 246 0 16 chr20 26451489 26451550 -40216455 + (TATATG)n Simple_repeat Simple_repeat 3 62 0 450 276 0 0 chr20 26451555 26451729 -40216276 + (TATG)n Simple_repeat Simple_repeat 2 175 0 433 261 4 19 chr20 26451731 26451802 -40216203 + (TATATG)n Simple_repeat Simple_repeat 1 72 -540 2786 90 0 0 chr20 26451802 26452157 -40215848 + THE1A LTR MaLR 1 355 0 433 261 4 19 chr20 26452157 26452353 -40215652 + (TATATG)n Simple_repeat Simple_repeat 72 612 0 357 241 0 43 chr20 26452373 26452489 -40215516 + (TATATG)n Simple_repeat Simple_repeat 2 112 0 499 243 0 11 chr20 26452490 26452671 -40215334 + (TG)n Simple_repeat Simple_repeat 2 180 0 499 247 0 11 chr20 26452705 26452887 -40215118 + (TG)n Simple_repeat Simple_repeat 1 180 0 2878 125 3 1 chr20 26454172 26454723 -40213282 + L1M1 LINE L1 5109 5659 -646 401 300 78 28 chr20 26454780 26454960 -40213045 + LTR33 LTR ERVL 11 199 -322 622 218 0 0 chr20 26457746 26457856 -40210149 - FLAM_C SINE Alu -32 111 2 298 314 151 21 chr20 26459047 26459432 -40208573 - L2 LINE L2 -1078 2236 1802 287 65 22 0 chr20 26459532 26459578 -40208427 + (TG)n Simple_repeat Simple_repeat 1 47 0 1691 188 93 14 chr20 26460547 26460914 -40207091 + MSTD LTR MaLR 1 396 0 242 292 49 42 chr20 26461477 26461621 -40206384 - MER5A DNA MER1_type -38 151 7 218 303 114 0 chr20 26461747 26461879 -40206126 + MIR SINE MIR 110 256 -6 186 43 0 0 chr20 26462052 26462075 -40205930 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 268 331 48 0 chr20 26462945 26463090 -40204915 + MER5B DNA MER1_type 13 164 -14 283 225 99 18 chr20 26463108 26463219 -40204786 + MER5B DNA MER1_type 6 125 -53 338 214 87 95 chr20 26463280 26463406 -40204599 - MER63 DNA MER1_type -311 751 1 359 301 115 19 chr20 26464269 26464478 -40203527 + MIR SINE MIR 14 242 -20 267 146 0 0 chr20 26464768 26464809 -40203196 + LTR33 LTR ERVL 104 144 -377 34 0 0 0 chr20 26465171 26465205 -40202800 + AT_rich Low_complexity Low_complexity 1 34 0 376 267 25 17 chr20 26467804 26467924 -40200081 + GA-rich Low_complexity Low_complexity 1 121 0 210 320 0 0 chr20 26468601 26468676 -40199329 + MIR SINE MIR 152 226 -36 27989 61 5 5 chr20 26470632 26475026 -40192979 - HAL1b LINE L1 -8 6146 390 322 243 28 133 chr20 26475821 26476183 -40191822 - L1M4 LINE L1 -1455 4691 4368 309 68 0 0 chr20 26476731 26476775 -40191230 + (TG)n Simple_repeat Simple_repeat 2 45 0 5398 199 66 25 chr20 26477078 26479226 -40188779 - L1MB7 LINE L1 -9 6175 3943 1933 131 55 7 chr20 26479311 26479601 -40188404 - AluSx SINE Alu 0 312 9 22 35 0 0 chr20 26479758 26479787 -40188218 + AT_rich Low_complexity Low_complexity 1 29 0 198 208 0 0 chr20 26480960 26481013 -40186992 + GA-rich Low_complexity Low_complexity 1 53 0 368 261 18 9 chr20 26481932 26482043 -40185962 + MIR SINE MIR 30 141 -67 256 188 0 0 chr20 26483152 26483200 -40184805 - MLT1H LTR MaLR 0 549 502 1515 97 0 5 chr20 26483200 26483395 -40184610 + AluSc SINE Alu 96 289 -20 668 257 171 32 chr20 26484285 26484631 -40183374 - LTR16C LTR ERVL -2 489 96 1487 190 7 7 chr20 26484731 26485036 -40182969 + L1MB5 LINE L1 5851 6155 -19 602 265 18 0 chr20 26486527 26486697 -40181308 - MER5B DNA MER1_type -2 176 4 309 297 51 0 chr20 26486912 26487030 -40180975 + MIR SINE MIR 30 153 -55 955 169 0 13 chr20 26487539 26487693 -40180312 + FRAM SINE Alu 1 151 -25 22 35 0 0 chr20 26487700 26487729 -40180276 + AT_rich Low_complexity Low_complexity 1 29 0 422 314 53 14 chr20 26487773 26487980 -40180025 + MIR SINE MIR 15 229 -33 6620 123 17 29 chr20 26489175 26490259 -40177746 + MER11C LTR ERVK 1 1071 0 649 266 173 20 chr20 26490786 26491180 -40176825 + LTR16A1 LTR ERVL 3 456 -1 1609 198 43 6 chr20 26492193 26492521 -40175484 - MER58B DNA MER1_type 0 341 2 323 224 30 82 chr20 26492602 26492736 -40175269 + L1ME4a LINE L1 5973 6099 -22 25 0 0 0 chr20 26492739 26492764 -40175241 + AT_rich Low_complexity Low_complexity 1 25 0 331 219 73 0 chr20 26493799 26493881 -40174124 - L2 LINE L2 -49 3223 3136 26 30 0 0 chr20 26495556 26495589 -40172416 + AT_rich Low_complexity Low_complexity 1 33 0 372 209 0 0 chr20 26495694 26495785 -40172220 + CT-rich Low_complexity Low_complexity 3 93 0 185 293 17 17 chr20 26495889 26495947 -40172058 - L2 LINE L2 -28 3285 3228 4391 179 31 7 chr20 26496266 26497146 -40170859 - MER54A LTR ERVL 0 901 1 1309 181 0 22 chr20 26497227 26497459 -40170546 + AluJo SINE Alu 37 263 -49 1087 168 0 59 chr20 26498264 26498467 -40169538 + AluJb SINE Alu 122 312 0 1312 130 51 24 chr20 26498526 26498780 -40169225 - L1MA8 LINE L1 -4 6287 6027 26 64 0 0 chr20 26499098 26499145 -40168860 + AT_rich Low_complexity Low_complexity 1 47 0 288 241 35 26 chr20 26499373 26499489 -40168516 - MLT1J2 LTR MaLR -242 208 92 827 172 47 7 chr20 26499489 26499707 -40168298 + L1MC/D LINE L1 5306 5529 -641 1865 159 82 50 chr20 26499764 26500180 -40167825 + MSTB1 LTR MaLR 4 432 0 310 239 15 15 chr20 26500204 26500271 -40167734 - L2 LINE L2 -4 3268 3202 219 315 33 11 chr20 26500266 26500358 -40167647 - MIR SINE MIR -103 159 66 * 287 283 13 13 chr20 26501355 26501514 -40166491 + L1MEc LINE L1 707 865 -5531 1567 164 79 33 chr20 26501525 26501891 -40166114 + L1MC/D LINE L1 635 1017 -5409 3385 150 43 15 chr20 26501892 26502498 -40165507 + L1MC1 LINE L1 5700 6322 -11 309 266 75 29 chr20 26502558 26502731 -40165274 + L1MC/D LINE L1 1047 1227 -5189 1014 309 92 25 chr20 26502742 26503627 -40164378 + L1MC/D LINE L1 1193 2295 -4312 255 244 32 16 chr20 26503775 26503898 -40164107 + (TA)n Simple_repeat Simple_repeat 1 125 0 794 110 87 0 chr20 26504003 26504130 -40163875 + MER85 DNA T2_type 2 139 0 279 169 12 36 chr20 26504157 26504240 -40163765 + HAL1 LINE L1 981 1061 -1446 847 356 55 55 chr20 26506671 26507371 -40160634 + L1MC/D LINE L1 4502 5201 -1225 1397 242 104 13 chr20 26507371 26507834 -40160171 + MLT1D LTR MaLR 1 505 0 847 356 55 55 chr20 26507834 26507931 -40160074 + L1MC/D LINE L1 5201 5297 -1129 198 0 0 0 chr20 26507931 26507953 -40160052 + (CA)n Simple_repeat Simple_repeat 2 23 0 847 356 55 55 chr20 26507953 26508325 -40159680 + L1MC/D LINE L1 5297 5671 -755 2407 78 0 13 chr20 26508909 26509216 -40158789 - AluY SINE Alu -8 303 1 338 298 33 33 chr20 26509384 26509505 -40158500 + L1MC/D LINE L1 5937 6057 -2031 297 0 0 0 chr20 26509534 26509567 -40158438 + (TG)n Simple_repeat Simple_repeat 1 33 0 249 108 0 0 chr20 26509623 26509660 -40158345 + (TG)n Simple_repeat Simple_repeat 1 37 0 321 26 0 0 chr20 26509720 26509758 -40158247 + (TG)n Simple_repeat Simple_repeat 1 38 0 299 331 261 0 chr20 26510207 26510349 -40157656 + MIR SINE MIR 49 227 -35 1008 224 0 14 chr20 26510394 26510604 -40157401 + MER58A DNA MER1_type 3 209 -15 320 286 126 23 chr20 26510916 26511091 -40156914 - MLT1L LTR MaLR -2 613 421 207 100 0 0 chr20 26511357 26511387 -40156618 + (CTTG)n Simple_repeat Simple_repeat 2 31 0 276 235 88 0 chr20 26513716 26513784 -40154221 - L2 LINE L2 -1 3271 3198 656 272 129 31 chr20 26513835 26514341 -40153664 - MLT1G1 LTR MaLR 0 595 1 229 307 211 18 chr20 26514896 26515010 -40152995 - MIR SINE MIR -78 184 49 195 389 56 6 chr20 26516218 26516380 -40151625 + MIR SINE MIR 34 203 -59 1353 252 133 22 chr20 26516950 26517505 -40150500 - MLT1E3 LTR MaLR -7 617 1 3605 162 119 8 chr20 26518239 26518943 -40149062 - LTR39 LTR ERV1 0 783 2 1174 176 82 72 chr20 26521833 26522374 -40145631 - LTR36 LTR ERV1 -4 607 1 4108 191 42 12 chr20 26522998 26523931 -40144074 - L1MB3 LINE L1 -2 6181 5223 2144 120 0 0 chr20 26523973 26524257 -40143748 - AluSx SINE Alu -28 284 1 621 247 0 28 chr20 26524257 26524434 -40143571 - L1MB3 LINE L1 -879 5267 5096 195 356 54 31 chr20 26525428 26525650 -40142355 - L3 LINE CR1 -765 812 586 412 238 9 0 chr20 26525684 26525905 -40142100 + (CA)n Simple_repeat Simple_repeat 1 223 0 679 325 122 44 chr20 26526419 26527612 -40140393 + L2 LINE L2 2013 3311 -2 591 191 10 126 chr20 26527650 26527849 -40140156 - MER5B DNA MER1_type -2 176 1 893 245 138 11 chr20 26527928 26528304 -40139701 - MER110 LTR ERV1 -67 424 1 188 310 159 35 chr20 26529370 26529483 -40138522 + L2 LINE L2 3141 3267 -5 198 0 0 0 chr20 26529872 26529894 -40138111 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 202 308 76 67 chr20 26530283 26530436 -40137569 - MIR SINE MIR -2 260 110 342 0 0 0 chr20 26530436 26530474 -40137531 + (TC)n Simple_repeat Simple_repeat 1 38 0 216 0 0 0 chr20 26530473 26530497 -40137508 + (CA)n Simple_repeat Simple_repeat 1 24 0 * 202 308 76 67 chr20 26530474 26530567 -40137438 - MIR SINE MIR -152 110 35 381 295 48 59 chr20 26530763 26531034 -40136971 - LTR16A1 LTR ERVL 0 457 190 199 336 48 62 chr20 26531347 26531493 -40136512 + L3b LINE CR1 1146 1289 -294 748 210 22 0 chr20 26534510 26534648 -40133357 + FLAM_C SINE Alu 2 142 -1 776 202 0 0 chr20 26534668 26534797 -40133208 - FLAM_A SINE Alu -4 129 1 1055 204 83 45 chr20 26534822 26535135 -40132870 + MLT1A2 LTR MaLR 1 325 -49 270 343 56 28 chr20 26538852 26538995 -40129010 - MIR SINE MIR -114 148 2 385 250 127 48 chr20 26539824 26540092 -40127913 + MLT1H LTR MaLR 3 291 -258 710 171 23 63 chr20 26540139 26540314 -40127691 + MLT1H LTR MaLR 382 549 0 323 235 17 96 chr20 26540424 26540539 -40127466 + MIR3 SINE MIR 88 193 -15 1760 161 36 4 chr20 26541095 26541374 -40126631 + AluJb SINE Alu 1 288 -24 526 49 0 37 chr20 26541374 26541455 -40126550 + L1PA11 LINE L1 6097 6174 0 315 0 0 0 chr20 26541910 26541945 -40126060 + (TG)n Simple_repeat Simple_repeat 2 36 0 575 54 0 0 chr20 26541969 26542043 -40125962 - Alu SINE Alu -4 308 235 224 340 109 20 chr20 26542152 26542299 -40125706 + MIR SINE MIR 13 172 -90 25 83 0 0 chr20 26543648 26543708 -40124297 + GC_rich Low_complexity Low_complexity 1 60 0 241 265 0 20 chr20 26543709 26543807 -40124198 + G-rich Low_complexity Low_complexity 3 98 0 24 32 0 0 chr20 26543906 26543937 -40124068 + GC_rich Low_complexity Low_complexity 1 31 0 180 111 0 0 chr20 26545741 26545768 -40122237 + (A)n Simple_repeat Simple_repeat 1 27 0 532 171 51 0 chr20 26545957 26546074 -40121931 + L1MA7 LINE L1 6158 6280 -11 252 322 25 25 chr20 26548023 26548118 -40119887 - MIR SINE MIR -78 130 33 2206 128 0 0 chr20 26550002 26550299 -40117706 - AluSx SINE Alu -15 297 1 2349 92 0 10 chr20 26550524 26550838 -40117167 + AluY SINE Alu 1 311 0 238 325 12 0 chr20 26554083 26554163 -40113842 + (CACG)n Simple_repeat Simple_repeat 3 83 0 3638 174 26 19 chr20 26554563 26555283 -40112722 + L1MB2 LINE L1 5447 6171 0 687 234 128 20 chr20 26555343 26555802 -40112203 - MLT1G LTR MaLR -10 580 11 363 296 136 33 chr20 26556063 26556306 -40111699 + L1M4 LINE L1 5124 5391 -755 982 174 0 0 chr20 26556334 26556506 -40111499 - AluSg/x SINE Alu -4 308 137 191 333 87 0 chr20 26557846 26557915 -40110090 - L2 LINE L2 -5 3267 3193 864 253 26 32 chr20 26558436 26558804 -40109201 - MLT1G LTR MaLR -264 326 1 2717 114 70 5 chr20 26558941 26559370 -40108635 + MSTB2 LTR MaLR 1 457 0 274 192 0 0 chr20 26560505 26560557 -40107448 - MER5B DNA MER1_type -1 177 126 2192 110 0 7 chr20 26560785 26561095 -40106910 - AluSc SINE Alu -1 308 1 330 212 30 0 chr20 26561095 26561161 -40106844 - MER5A DNA MER1_type -113 76 9 204 158 0 0 chr20 26561761 26561799 -40106206 + (TATATG)n Simple_repeat Simple_repeat 4 41 0 291 323 46 0 chr20 26561905 26562035 -40105970 + MLT1H LTR MaLR 56 191 -358 304 273 123 19 chr20 26562082 26562236 -40105769 + MLT1H LTR MaLR 365 534 -15 258 271 0 0 chr20 26563303 26563410 -40104595 + (CA)n Simple_repeat Simple_repeat 1 107 0 241 290 0 0 chr20 26563422 26563491 -40104514 + (CA)n Simple_repeat Simple_repeat 2 70 0 390 278 0 0 chr20 26563504 26563684 -40104321 + (CA)n Simple_repeat Simple_repeat 1 180 0 410 283 14 0 chr20 26563695 26563833 -40104172 + (CA)n Simple_repeat Simple_repeat 2 141 0 353 306 109 5 chr20 26564627 26564820 -40103185 + MIR SINE MIR 28 240 -22 223 143 41 0 chr20 26566052 26566101 -40101904 + A-rich Low_complexity Low_complexity 4 54 0 266 284 0 19 chr20 26567496 26567651 -40100354 + (CA)n Simple_repeat Simple_repeat 2 153 0 298 224 106 12 chr20 26567735 26567820 -40100185 + L2 LINE L2 3197 3289 -24 23 0 0 0 chr20 26568282 26568305 -40099700 + GC_rich Low_complexity Low_complexity 1 23 0 2426 87 0 3 chr20 26569973 26570283 -40097722 - AluY SINE Alu -2 309 1 788 217 10 14 chr20 26570415 26570622 -40097383 - L1M4 LINE L1 -1550 4596 4391 322 323 78 42 chr20 26570637 26570854 -40097151 + MIR SINE MIR 11 235 -27 1939 157 6 6 chr20 26571282 26571639 -40096366 - AluSx SINE Alu 0 312 1 1876 204 49 158 chr20 26572258 26573119 -40094886 - L1MA10 LINE L1 -13 6321 5555 2135 98 7 14 chr20 26573155 26573463 -40094542 - AluSx SINE Alu 0 306 1 801 58 16 8 chr20 26574613 26574734 -40093271 + (TTTC)n Simple_repeat Simple_repeat 3 124 0 200 170 19 0 chr20 26575225 26575278 -40092727 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 618 303 6 22 chr20 26575658 26575836 -40092169 + MIR SINE MIR 5 179 -83 762 283 120 17 chr20 26576031 26576388 -40091617 + LTR16C LTR ERVL 82 475 -16 220 361 111 0 chr20 26577825 26578033 -40089972 + L2 LINE L2 3083 3313 0 2486 76 3 0 chr20 26578095 26578396 -40089609 - AluY SINE Alu -9 302 1 375 350 127 0 chr20 26578826 26579109 -40088896 - L2 LINE L2 -420 2894 2576 191 246 101 43 chr20 26579348 26579486 -40088519 - L2 LINE L2 -1219 2095 1950 21 0 0 0 chr20 26579688 26579709 -40088296 + AT_rich Low_complexity Low_complexity 1 21 0 388 157 43 78 chr20 26581105 26581220 -40086785 - LTR16C LTR ERVL 0 491 381 2438 77 37 0 chr20 26582357 26582656 -40085349 - AluSx SINE Alu -2 310 1 209 161 0 0 chr20 26583335 26583366 -40084639 + (TG)n Simple_repeat Simple_repeat 2 32 0 423 291 117 54 chr20 26583687 26583932 -40084073 - L1MDa LINE L1 -760 1730 1502 2717 134 29 2 chr20 26583932 26584349 -40083656 + MSTA LTR MaLR 1 428 0 423 291 117 54 chr20 26584349 26584425 -40083580 - L1MDa LINE L1 -988 1502 1432 2241 123 0 0 chr20 26584425 26584733 -40083272 + AluSq SINE Alu 1 308 -5 423 291 117 54 chr20 26584733 26585926 -40082079 - L1MDa LINE L1 -1058 1432 43 414 0 0 0 chr20 26586247 26586293 -40081712 + (TA)n Simple_repeat Simple_repeat 2 47 0 23454 79 5 0 chr20 26586302 26589496 -40078509 + L1PA5 LINE L1 11 3220 -2926 9777 41 38 0 chr20 26589496 26591472 -40076533 + L1PA5 LINE L1 4160 6174 0 2440 64 0 14 chr20 26591473 26591768 -40076237 + AluY SINE Alu 2 292 -19 407 264 23 0 chr20 26591769 26591856 -40076149 - L1MC4 LINE L1 -1340 6702 6614 393 283 33 0 chr20 26591836 26591928 -40076077 + L1MC4 LINE L1 6614 6708 -1334 * 27 0 0 0 chr20 26591931 26591958 -40076047 + AT_rich Low_complexity Low_complexity 1 27 0 1966 98 0 4 chr20 26591958 26592213 -40075792 - AluY SINE Alu -26 285 32 323 271 90 39 chr20 26592246 26592401 -40075604 - MER90 LTR ERV1 -7 568 406 252 184 0 0 chr20 26593891 26593940 -40074065 + CT-rich Low_complexity Low_complexity 2 50 0 261 167 0 0 chr20 26593943 26593997 -40074008 + (CA)n Simple_repeat Simple_repeat 2 55 0 40 73 0 0 chr20 26594353 26594435 -40073570 + AT_rich Low_complexity Low_complexity 1 82 0 2049 129 10 0 chr20 26594552 26594847 -40073158 + AluSq SINE Alu 1 298 -15 2348 191 39 8 chr20 26594947 26595461 -40072544 - L1MB3 LINE L1 -2 6181 5652 346 157 0 0 chr20 26595464 26595515 -40072490 - AluJ/FRAM SINE Alu -20 282 232 590 255 25 0 chr20 26595516 26595673 -40072332 - L1MB3 LINE L1 -511 5669 5509 2164 113 0 7 chr20 26595761 26596054 -40071951 + AluSx SINE Alu 8 298 -14 1498 185 19 69 chr20 26596210 26596529 -40071476 - AluJo SINE Alu -9 303 1 2365 181 39 0 chr20 26596790 26597200 -40070805 - MSTB LTR MaLR 0 426 1 833 315 20 4 chr20 26597249 26597500 -40070505 + MIR SINE MIR 3 257 -5 2504 50 0 3 chr20 26598502 26598800 -40069205 + AluY SINE Alu 1 297 -14 804 290 85 78 chr20 26598978 26599419 -40068586 - L1MEd LINE L1 -2929 3200 2763 2353 93 26 0 chr20 26599419 26599721 -40068284 - AluSx SINE Alu -1 311 2 804 290 85 78 chr20 26599721 26600460 -40067545 - L1MEd LINE L1 -3366 2763 2060 240 203 0 0 chr20 26600689 26600748 -40067257 + (TA)n Simple_repeat Simple_repeat 2 60 0 360 298 43 60 chr20 26600827 26601572 -40066433 - L1MEd LINE L1 -837 1653 834 390 91 0 0 chr20 26601629 26601684 -40066321 + (TTTTC)n Simple_repeat Simple_repeat 4 58 0 733 204 74 11 chr20 26601874 26602050 -40065955 + MER5A DNA MER1_type 1 187 -2 361 307 72 80 chr20 26602354 26602514 -40065491 - L1MEd LINE L1 -5248 871 711 1235 213 47 89 chr20 26602514 26602895 -40065110 - MLT1A1 LTR MaLR 0 365 1 361 307 72 80 chr20 26602895 26603148 -40064857 - L1MEd LINE L1 -5408 711 461 268 153 14 28 chr20 26603442 26603514 -40064491 + (TGG)n Simple_repeat Simple_repeat 3 73 0 1456 224 56 0 chr20 26603532 26603854 -40064151 - MER58B DNA MER1_type -1 340 1 344 344 0 0 chr20 26603857 26603982 -40064023 + (TGG)n Simple_repeat Simple_repeat 3 127 0 561 231 0 0 chr20 26604002 26604175 -40063830 + (ATGGTG)n Simple_repeat Simple_repeat 1 173 0 2234 115 0 13 chr20 26604934 26605248 -40062757 - AluSx SINE Alu -2 310 1 1633 182 146 42 chr20 26606340 26606773 -40061232 + L1MB7 LINE L1 5707 6184 0 301 289 70 6 chr20 26607766 26607922 -40060083 - LTR16C LTR ERVL -188 303 138 1464 168 212 22 chr20 26607994 26608357 -40059648 - MSTB1 LTR MaLR 0 432 1 2435 128 87 17 chr20 26609620 26610035 -40057970 - MER65A LTR ERV1 0 445 2 285 226 89 57 chr20 26611391 26611515 -40056490 - L1MC5 LINE L1 -50 7911 7784 299 177 21 94 chr20 26612095 26612191 -40055814 - L1MC5 LINE L1 -166 7795 7707 7264 191 44 24 chr20 26612254 26613902 -40054103 - L1MB3 LINE L1 -26 6157 4442 2060 125 0 11 chr20 26613902 26614220 -40053785 - AluSx SINE Alu 0 315 1 7264 191 44 24 chr20 26614220 26615151 -40052854 - L1MB3 LINE L1 -1741 4442 3530 235 345 138 0 chr20 26615205 26615350 -40052655 - MIR3 SINE MIR -12 196 32 184 230 260 10 chr20 26616482 26616582 -40051423 + MER5A DNA MER1_type 42 166 -23 * 392 205 12 0 chr20 26616508 26616591 -40051414 - MER5A DNA MER1_type -80 109 26 737 189 58 44 chr20 26620446 26620652 -40047353 - MLT1H LTR MaLR 0 549 341 292 303 22 34 chr20 26622612 26622790 -40045215 + HAL1 LINE L1 814 989 -1518 3546 253 68 47 chr20 26622840 26623065 -40044940 - L1M4 LINE L1 -1981 4976 4757 3916 140 21 25 chr20 26623065 26623569 -40044436 - L1MA5A LINE L1 0 6297 5795 3696 188 92 5 chr20 26623569 26624329 -40043676 - LTR1B LTR ERV1 0 826 1 3916 140 21 25 chr20 26624329 26624546 -40043459 - L1MA5A LINE L1 -502 5795 5579 3546 253 68 47 chr20 26624546 26624651 -40043354 - L1M4 LINE L1 -2200 4757 4656 2607 37 0 7 chr20 26624651 26624948 -40043057 - AluY SINE Alu -16 295 1 3546 253 68 47 chr20 26624948 26626342 -40041663 - L1M4 LINE L1 -2301 4656 3215 611 128 32 0 chr20 26626350 26626444 -40041561 - LOR1a LTR ERV1 0 497 401 39594 37 4 2 chr20 26626452 26632009 -40035996 - L1PA3 LINE L1 -7 6463 893 618 140 0 0 chr20 26631976 26632069 -40035936 - L1PA3 LINE L1 -6365 96 4 * 2013 182 39 0 chr20 26632074 26632437 -40035568 - LOR1b LTR ERV1 -84 377 1 737 260 117 37 chr20 26632437 26633080 -40034925 - L1M4 LINE L1 -3750 3207 2565 * 1909 167 84 38 chr20 26633074 26633516 -40034489 + L1MA4A LINE L1 5570 6062 -122 736 232 0 11 chr20 26633417 26633594 -40034411 + L1PB4 LINE L1 5980 6154 -2 * 1538 252 71 92 chr20 26633690 26634202 -40033803 - L1M4 LINE L1 -4568 2391 1870 1682 88 22 9 chr20 26634202 26634429 -40033576 - AluSg/x SINE Alu -2 310 81 1538 252 71 92 chr20 26634429 26635131 -40032874 - L1M4 LINE L1 -5089 1870 1188 328 290 43 43 chr20 26635201 26635363 -40032642 - L1M4 LINE L1 -5667 1188 1027 266 279 107 25 chr20 26635686 26635883 -40032122 - L1M4 LINE L1 -6635 224 12 381 261 140 71 chr20 26636304 26636626 -40031379 + MARNA DNA Mariner 202 545 -41 3092 139 8 33 chr20 26637409 26637746 -40030259 + LOR1a LTR ERV1 1 322 -175 1629 190 14 20 chr20 26637746 26638041 -40029964 - AluJb SINE Alu -18 294 2 3092 139 8 33 chr20 26638041 26638213 -40029792 + LOR1a LTR ERV1 322 497 0 264 323 36 21 chr20 26639874 26640066 -40027939 + L2 LINE L2 2836 3030 -283 285 259 149 58 chr20 26640121 26640295 -40027710 - LTR16A1 LTR ERVL 0 457 268 1773 153 88 16 chr20 26641194 26641514 -40026491 - MER61A LTR ERV1 0 343 1 2295 110 0 22 chr20 26641990 26642309 -40025696 + AluSx SINE Alu 1 312 0 180 298 214 0 chr20 26643645 26643729 -40024276 - MIR SINE MIR -159 103 2 285 265 25 125 chr20 26643875 26644075 -40023930 + L1MC4 LINE L1 7836 8015 -27 3234 223 79 34 chr20 26644297 26645545 -40022460 + L1MD2 LINE L1 4995 6303 -56 264 83 0 0 chr20 26645515 26645551 -40022454 + L1MC3 LINE L1 7701 7736 -49 * 285 155 35 0 chr20 26645553 26645611 -40022394 + L1MD3 LINE L1 7918 7977 -18 293 224 35 0 chr20 26645613 26645698 -40022307 + (TA)n Simple_repeat Simple_repeat 2 89 0 2556 144 12 21 chr20 26645956 26646380 -40021625 + LOR1b LTR ERV1 40 459 -2 537 230 120 27 chr20 26646843 26647028 -40020977 + L1MD2 LINE L1 5841 6034 -132 292 217 60 0 chr20 26648218 26648301 -40019704 + LTR16C LTR ERVL 380 467 -24 1889 143 0 38 chr20 26648334 26648629 -40019376 + AluSx SINE Alu 1 282 -30 331 26 0 0 chr20 26648629 26648668 -40019337 + (TAAA)n Simple_repeat Simple_repeat 2 160 0 720 266 98 48 chr20 26652175 26652303 -40015702 - L2 LINE L2 -2 3311 3191 2356 98 3 0 chr20 26652303 26652608 -40015397 + AluSx SINE Alu 5 310 -2 720 266 98 48 chr20 26652608 26652897 -40015108 - L2 LINE L2 -122 3191 2873 4239 147 12 18 chr20 26652939 26653660 -40014345 - LTR62 LTR ERVK -2 717 1 406 304 72 6 chr20 26653665 26653846 -40014159 + MER3 DNA MER1_type 1 193 -16 1870 157 7 0 chr20 26654537 26654843 -40013162 - AluSx SINE Alu 0 312 5 231 277 40 69 chr20 26655322 26655423 -40012582 + MIR SINE MIR 56 153 -109 208 117 67 100 chr20 26657854 26657914 -40010091 - MER5B DNA MER1_type 0 178 121 1451 169 18 11 chr20 26657916 26658189 -40009816 + L1PA13 LINE L1 5889 6163 0 439 258 42 0 chr20 26662613 26662733 -40005272 + MER5A DNA MER1_type 47 171 -18 338 317 24 8 chr20 26663346 26663469 -40004536 - MIR SINE MIR -66 196 72 323 272 105 18 chr20 26664041 26664155 -40003850 - L2 LINE L2 0 3313 3190 25 31 0 0 chr20 26664407 26664439 -40003566 + GC_rich Low_complexity Low_complexity 1 32 0 364 231 119 1 chr20 26665117 26665218 -40002787 + L1ME3A LINE L1 6009 6133 -31 261 0 0 0 chr20 26665218 26665247 -40002758 + (TG)n Simple_repeat Simple_repeat 1 29 0 364 231 119 1 chr20 26665247 26665282 -40002723 + L1ME3A LINE L1 6133 6162 -2 1149 174 85 25 chr20 26665301 26665536 -40002469 + AluJo SINE Alu 38 286 -26 468 279 39 73 chr20 26665545 26665778 -40002227 - L2 LINE L2 -1484 1830 1606 199 250 92 0 chr20 26665860 26665936 -40002069 - MIR SINE MIR -125 137 55 21 0 0 0 chr20 26666744 26666765 -40001240 + AT_rich Low_complexity Low_complexity 1 21 0 1721 167 7 4 chr20 26666765 26667041 -40000964 - AluJo SINE Alu -25 287 11 11340 201 37 4 chr20 26667208 26670419 -39997586 - L1PA15 LINE L1 -17 6148 2827 2111 138 0 0 chr20 26670520 26670817 -39997188 - AluSx SINE Alu -15 297 1 365 284 0 0 chr20 26672382 26672470 -39995535 - MIR SINE MIR -50 212 125 253 302 76 58 chr20 26672532 26672704 -39995301 - MIR SINE MIR -31 231 57 4505 160 26 11 chr20 26672942 26674194 -39993811 + L1MA4A LINE L1 4955 6282 -21 2350 110 0 25 chr20 26674736 26675053 -39992952 - AluSq SINE Alu -4 309 1 1083 282 84 7 chr20 26675175 26675724 -39992281 - L1MDa LINE L1 -2191 4349 3759 317 315 20 5 chr20 26675876 26676079 -39991926 - L1MDa LINE L1 -4466 2074 1869 22 35 0 0 chr20 26676114 26676143 -39991862 + AT_rich Low_complexity Low_complexity 1 29 0 291 256 75 15 chr20 26676236 26676369 -39991636 - L1MDa LINE L1 -5269 1261 1121 227 281 0 18 chr20 26677561 26677618 -39990387 - LTR16C LTR ERVL -293 198 143 4420 113 13 6 chr20 26678368 26678999 -39989006 + MER41B LTR ERV1 1 635 0 2318 118 0 3 chr20 26681216 26681529 -39986476 + AluSx SINE Alu 1 312 0 2181 89 32 0 chr20 26682332 26682613 -39985392 - AluSx SINE Alu -18 294 5 308 307 88 7 chr20 26687034 26687171 -39980834 - MIR SINE MIR -8 254 107 1927 142 7 30 chr20 26688140 26688442 -39979563 - AluJb SINE Alu -17 295 1 257 164 0 18 chr20 26688746 26688801 -39979204 + GA-rich Low_complexity Low_complexity 4 57 0 1433 223 75 5 chr20 26690011 26690411 -39977594 + Charlie4a DNA MER1_type 20 447 -61 195 282 118 12 chr20 26690971 26691056 -39976949 - L2 LINE L2 -20 3293 3200 224 287 0 80 chr20 26691910 26692098 -39975907 + G-rich Low_complexity Low_complexity 4 176 0 264 301 0 66 chr20 26692203 26692386 -39975619 + G-rich Low_complexity Low_complexity 2 172 0 230 296 12 0 chr20 26692905 26692986 -39975019 + CT-rich Low_complexity Low_complexity 2 83 0 185 233 0 15 chr20 26694072 26694127 -39973878 - MIR SINE MIR -67 141 90 1209 240 115 47 chr20 26694335 26694866 -39973139 - MLT1G3 LTR MaLR -9 586 1 1759 241 71 35 chr20 26695796 26696537 -39971468 + L1MCb LINE L1 601 1396 -5168 2443 137 0 3 chr20 26696537 26696874 -39971131 + MER1B DNA MER1_type 1 336 -1 1759 241 71 35 chr20 26696874 26697190 -39970815 + L1MCb LINE L1 1396 1699 -4865 1040 122 14 0 chr20 26697192 26697339 -39970666 + AluSg/x SINE Alu 158 306 -6 2874 256 49 65 chr20 26697339 26698119 -39969886 + L1MCb LINE L1 1688 2479 -4085 2245 109 20 0 chr20 26698119 26698412 -39969593 + AluY SINE Alu 1 299 -12 2874 256 49 65 chr20 26698412 26699523 -39968482 + L1MCb LINE L1 2479 3687 -2877 7041 70 47 27 chr20 26699523 26701276 -39966729 - SVA Other Other -553 1384 1 2874 256 49 65 chr20 26701276 26701482 -39966523 + L1MCb LINE L1 3687 3895 -2669 445 284 37 31 chr20 26701483 26701645 -39966360 - MER5B DNA MER1_type 0 178 16 1008 287 46 12 chr20 26704243 26704657 -39963348 + L1ME LINE L1 5316 5743 -421 185 178 22 0 chr20 26705873 26705918 -39962087 + (TA)n Simple_repeat Simple_repeat 1 46 0 224 0 65 0 chr20 26706374 26706405 -39961600 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 2002 119 26 0 chr20 26706410 26706678 -39961327 - AluSx SINE Alu -37 275 1 470 230 40 27 chr20 26707742 26707890 -39960115 + MER5A DNA MER1_type 6 155 -34 415 277 100 30 chr20 26708414 26708775 -39959230 - L1ME LINE L1 -301 5820 5375 2750 171 24 64 chr20 26710381 26711019 -39956986 - LTR9 LTR ERV1 0 612 1 238 298 86 7 chr20 26711176 26711327 -39956678 - LTR16A1 LTR ERVL -287 170 8 357 282 19 0 chr20 26712080 26712183 -39955822 - MIR SINE MIR -84 124 20 1594 173 13 53 chr20 26712479 26712797 -39955208 - AluJb SINE Alu -7 305 1 288 316 30 38 chr20 26713935 26714172 -39953833 - L1ME4a LINE L1 -222 5899 5665 1638 161 84 0 chr20 26714190 26714475 -39953530 + AluSx SINE Alu 1 309 -3 805 123 25 12 chr20 26714508 26714670 -39953335 + GA-rich Low_complexity Low_complexity 4 167 0 282 256 56 0 chr20 26715268 26715348 -39952657 + MIR SINE MIR 67 142 -66 345 24 0 0 chr20 26715410 26715452 -39952553 + (TGGA)n Simple_repeat Simple_repeat 3 44 0 207 311 57 25 chr20 26715572 26715694 -39952311 + MIR SINE MIR 137 262 0 5295 181 81 124 chr20 26715955 26717103 -39950902 - L1MC3 LINE L1 0 7995 6879 264 98 0 0 chr20 26717103 26717144 -39950861 + MADE1 DNA Mariner 40 80 0 5295 181 81 124 chr20 26717144 26717961 -39950044 - L1MC3 LINE L1 -1116 6879 6029 1148 226 41 126 chr20 26718442 26718992 -39949013 + MLT1G LTR MaLR 1 555 0 547 291 87 0 chr20 26718997 26719203 -39948802 - MIR SINE MIR -27 235 12 1801 171 40 70 chr20 26720437 26720765 -39947240 + MSTB1 LTR MaLR 1 314 -118 2115 129 3 0 chr20 26720765 26721059 -39946946 - AluSx SINE Alu -17 295 1 1801 171 40 70 chr20 26721059 26721175 -39946830 + MSTB1 LTR MaLR 314 432 0 1369 227 21 35 chr20 26721959 26722334 -39945671 - MLT1A2 LTR MaLR -4 370 1 1795 147 0 7 chr20 26724962 26725235 -39942770 - AluSx SINE Alu 0 312 42 1242 260 210 11 chr20 26725796 26726257 -39941748 + MLT1H1 LTR MaLR 1 553 -2 334 324 80 9 chr20 26726808 26727183 -39940822 + LTR16C LTR ERVL 75 488 -3 559 291 44 86 chr20 26727750 26727811 -39940194 + HAL1 LINE L1 621 683 -1824 1886 168 54 0 chr20 26727811 26728181 -39939824 - MLT1B LTR MaLR 0 390 1 559 291 44 86 chr20 26728181 26728710 -39939295 + HAL1 LINE L1 683 1186 -1321 659 149 8 0 chr20 26728718 26728839 -39939166 + GA-rich Low_complexity Low_complexity 4 125 0 611 316 159 32 chr20 26728857 26729361 -39938644 + HAL1 LINE L1 1385 1952 -555 373 238 97 57 chr20 26729478 26729705 -39938300 + HAL1 LINE L1 2164 2399 -108 1073 295 105 23 chr20 26729834 26730350 -39937655 + L1ME3A LINE L1 5596 6153 -17 1903 193 61 8 chr20 26730953 26731346 -39936659 + MSTB LTR MaLR 13 426 0 511 242 45 0 chr20 26732945 26733077 -39934928 - MER3 DNA MER1_type -4 205 68 231 317 10 10 chr20 26733888 26733992 -39934013 - L1M4 LINE L1 -2415 3731 3628 578 283 44 74 chr20 26734259 26734556 -39933449 - L1ME LINE L1 -404 5766 5479 317 106 29 67 chr20 26735433 26735537 -39932468 + GA-rich Low_complexity Low_complexity 3 102 0 534 140 37 37 chr20 26735560 26735724 -39932281 + GA-rich Low_complexity Low_complexity 2 165 0 214 29 57 0 chr20 26735740 26735775 -39932230 + (GGGA)n Simple_repeat Simple_repeat 4 40 0 249 33 0 0 chr20 26738096 26738126 -39929879 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 235 236 318 0 chr20 26740951 26741061 -39926944 - MER5B DNA MER1_type -33 145 1 328 254 49 90 chr20 26741273 26741384 -39926621 + MIR SINE MIR 6 107 -153 2189 100 7 13 chr20 26741384 26741685 -39926320 + AluSg SINE Alu 5 303 -7 328 254 49 90 chr20 26741685 26741741 -39926264 + MIR SINE MIR 107 164 -96 197 151 19 0 chr20 26744329 26744382 -39923623 + (GTTTG)n Simple_repeat Simple_repeat 2 55 0 623 191 143 37 chr20 26746926 26747115 -39920890 + MER20 DNA MER1_type 11 219 0 210 329 27 0 chr20 26748052 26748125 -39919880 - L2 LINE L2 -9 3263 3189 345 258 62 86 chr20 26748772 26748981 -39919024 - MIR SINE MIR -1 207 4 317 329 40 26 chr20 26749309 26749461 -39918544 - MIR SINE MIR -74 188 35 1618 173 105 3 chr20 26749528 26749870 -39918135 - MLT1B LTR MaLR -8 382 6 207 255 57 57 chr20 26752270 26752376 -39915629 + L2 LINE L2 2959 3064 -208 3871 158 70 32 chr20 26754176 26754924 -39913081 + LTR39 LTR ERV1 1 776 -7 260 141 0 28 chr20 26755642 26755713 -39912292 + (TCTCTG)n Simple_repeat Simple_repeat 4 72 0 2904 161 41 4 chr20 26757174 26757685 -39910320 + L1PB4 LINE L1 5625 6154 -2 200 272 74 12 chr20 26757892 26757973 -39910032 - L2 LINE L2 -36 3236 3151 230 273 31 117 chr20 26758347 26758475 -39909530 - MIR SINE MIR -44 218 102 320 200 25 0 chr20 26759459 26759539 -39908466 + LTR16C LTR ERVL 385 466 -25 1273 296 53 8 chr20 26759878 26760371 -39907634 - L1ME1 LINE L1 -31 6135 5621 22 0 0 0 chr20 26760677 26760699 -39907306 + AT_rich Low_complexity Low_complexity 1 22 0 12823 169 11 27 chr20 26760699 26763313 -39904692 - L1PB1 LINE L1 0 6867 4303 1564 181 51 0 chr20 26763313 26763606 -39904399 - AluJb SINE Alu -4 308 1 12823 169 11 27 chr20 26763606 26764659 -39903346 - L1PB1 LINE L1 -2564 4303 3234 767 127 13 53 chr20 26764658 26764808 -39903197 - L1PB1 LINE L1 -6084 779 636 * 1087 169 0 0 chr20 26764806 26764989 -39903016 - L1PB1 LINE L1 -6678 185 3 2173 71 0 3 chr20 26765330 26765660 -39902345 - AluY SINE Alu 0 329 1 516 249 162 0 chr20 26766360 26766533 -39901472 + MER3 DNA MER1_type 9 209 0 206 253 101 13 chr20 26767122 26767201 -39900804 + MIR SINE MIR 58 143 -65 243 266 16 16 chr20 26767222 26767286 -39900719 - MER5A DNA MER1_type -6 183 120 953 206 24 28 chr20 26767287 26767535 -39900470 + L1MD3 LINE L1 7749 7995 0 287 288 92 25 chr20 26768687 26768850 -39899155 + MER5A DNA MER1_type 14 187 -2 230 208 38 0 chr20 26769707 26769760 -39898245 - L2 LINE L2 -4 3268 3214 2258 63 0 11 chr20 26771047 26771365 -39896640 - AluY SINE Alu 0 315 1 283 205 217 12 chr20 26771671 26771754 -39896251 + MLT1J1 LTR MaLR 36 135 -311 339 274 103 45 chr20 26771763 26771986 -39896019 + MLT1J2 LTR MaLR 204 439 -11 361 237 112 10 chr20 26772831 26772972 -39895033 + MIR SINE MIR 25 180 -77 476 291 118 34 chr20 26775097 26775556 -39892449 + MLT1G1 LTR MaLR 16 590 0 267 344 18 12 chr20 26776533 26776696 -39891309 + G-rich Low_complexity Low_complexity 6 169 0 266 248 53 60 chr20 26776880 26777013 -39890992 - LTR16C LTR ERVL -1 490 359 266 233 14 14 chr20 26777657 26777730 -39890275 - MER63 DNA MER1_type -11 1049 977 366 247 22 0 chr20 26777732 26777821 -39890184 - MER63 DNA MER1_type -312 749 659 304 299 69 52 chr20 26777903 26778077 -39889928 + MER5A DNA MER1_type 12 188 -1 534 204 190 7 chr20 26778517 26778659 -39889346 - MER5A DNA MER1_type -7 182 15 245 188 0 21 chr20 26778890 26778938 -39889067 - MLT1G LTR MaLR -97 458 412 273 306 35 12 chr20 26779052 26779137 -39888868 - MLT1G LTR MaLR -313 277 191 241 259 0 35 chr20 26779209 26779294 -39888711 - MLT1G LTR MaLR -488 105 24 22 0 0 0 chr20 26779972 26779994 -39888011 + AT_rich Low_complexity Low_complexity 1 22 0 210 128 0 0 chr20 26780119 26780158 -39887847 + (TG)n Simple_repeat Simple_repeat 2 40 0 507 281 89 38 chr20 26780279 26780999 -39887006 - L1MEd LINE L1 -4786 1524 700 354 296 47 71 chr20 26781032 26781252 -39886753 - HAL1b LINE L1 -740 608 397 2297 89 0 0 chr20 26781252 26781554 -39886451 - AluY SINE Alu -9 302 1 354 296 47 71 chr20 26781554 26781671 -39886334 - HAL1b LINE L1 -951 397 279 212 194 0 0 chr20 26781791 26781827 -39886178 + (TA)n Simple_repeat Simple_repeat 1 36 0 782 271 61 23 chr20 26782106 26782545 -39885460 - LTR50 LTR ERVL -13 782 380 * 833 246 195 11 chr20 26782531 26782987 -39885018 - LTR50 LTR ERVL -244 551 12 218 250 0 0 chr20 26784395 26784443 -39883562 + (TGAG)n Simple_repeat Simple_repeat 3 50 0 4565 175 24 13 chr20 26784795 26785830 -39882175 - L1MB7 LINE L1 -31 6869 5822 1251 96 5 81 chr20 26785841 26786050 -39881955 - L1PB1 LINE L1 -1 6150 5958 10591 137 65 8 chr20 26786056 26789705 -39878300 - L1MB7 LINE L1 -2738 4124 125 9220 241 55 13 chr20 26789690 26792536 -39875469 - L1M4 LINE L1 -1029 5117 2151 * 225 307 40 13 chr20 26792647 26792722 -39875283 + MIR SINE MIR 68 144 -64 539 229 85 45 chr20 26793473 26793642 -39874363 - Charlie2a DNA MER1_type -30 2832 2650 2223 100 3 0 chr20 26793642 26793951 -39874054 + AluSg SINE Alu 1 310 0 539 229 85 45 chr20 26793951 26794004 -39874001 - Charlie2a DNA MER1_type -212 2650 2601 1422 119 15 0 chr20 26794004 26794205 -39873800 + AluSg SINE Alu 21 224 -86 3411 240 94 83 chr20 26794210 26796356 -39871649 - Charlie2a DNA MER1_type -246 2616 447 3091 207 75 39 chr20 26797926 26798451 -39869554 - MER89-int LTR ERV1 -3053 3748 3176 1273 261 54 24 chr20 26798451 26798876 -39869129 + LTR47B LTR ERVL 2 439 -4 3091 207 75 39 chr20 26798876 26799240 -39868765 - MER89-int LTR ERV1 -3625 3176 2827 428 230 20 0 chr20 26799248 26799348 -39868657 - MER89-int LTR ERV1 -4153 2648 2547 6007 197 49 49 chr20 26799622 26800840 -39867165 - MER89-int LTR ERV1 -4232 2569 1349 1460 237 12 19 chr20 26800840 26800884 -39867121 - MLT2D LTR ERVL 0 414 371 315 0 0 0 chr20 26800884 26800919 -39867086 + (TG)n Simple_repeat Simple_repeat 1 35 0 1460 237 12 19 chr20 26800919 26801291 -39866714 - MLT2D LTR ERVL -43 371 1 6007 197 49 49 chr20 26801291 26801554 -39866451 - MER89-int LTR ERV1 -5451 1350 1088 575 267 71 35 chr20 26801556 26801867 -39866138 + L1ME3 LINE L1 5756 6077 -85 1727 127 8 80 chr20 26802498 26802869 -39865136 - MER4A LTR ERV1 0 664 261 575 147 0 11 chr20 26802873 26802968 -39865037 - MER4A LTR ERV1 -570 94 1 786 253 47 4 chr20 26804445 26804817 -39863188 + MER63 DNA MER1_type 4 1061 0 238 245 138 32 chr20 26806483 26806577 -39861428 + MER5A DNA MER1_type 86 189 0 307 132 88 29 chr20 26806581 26806649 -39861356 + L2 LINE L2 3186 3257 -56 285 228 141 34 chr20 26806774 26806923 -39861082 - MER117 DNA MER1_type -28 169 5 184 253 24 84 chr20 26807242 26807325 -39860680 - L2 LINE L2 -3 3269 3192 452 301 85 35 chr20 26808622 26808941 -39859064 + L1MC4 LINE L1 7538 7872 -170 388 254 69 23 chr20 26809005 26809135 -39858870 - L1MC4 LINE L1 -11 8031 7896 301 104 0 0 chr20 26809134 26809182 -39858823 + L1MA9 LINE L1 6265 6312 0 * 256 210 16 16 chr20 26809731 26809793 -39858212 - L1P5 LINE L1 -268 5888 5827 1343 164 18 32 chr20 26809825 26810105 -39857900 + L1MA7 LINE L1 5876 6151 -140 351 113 0 0 chr20 26810105 26810158 -39857847 + (CA)n Simple_repeat Simple_repeat 1 53 0 274 233 89 0 chr20 26811278 26811368 -39856637 + LTR16C LTR ERVL 380 477 -14 446 282 71 74 chr20 26812056 26812393 -39855612 - LTR16C LTR ERVL 0 491 156 1587 194 28 22 chr20 26812733 26813089 -39854916 + MLT1A1 LTR MaLR 8 365 0 476 227 141 12 chr20 26813134 26813297 -39854708 + MER5A DNA MER1_type 6 189 0 283 350 65 33 chr20 26813892 26814341 -39853664 - L1MC/D LINE L1 -2011 5797 5335 507 339 124 28 chr20 26814988 26815207 -39852798 - L1MC/D LINE L1 -1537 4609 4413 1644 195 13 3 chr20 26815207 26815505 -39852500 - AluJb SINE Alu -11 301 1 507 339 124 28 chr20 26815505 26815721 -39852284 - L1MC/D LINE L1 -1733 4413 4132 592 220 67 0 chr20 26817587 26817737 -39850268 + MER5B DNA MER1_type 16 175 -3 304 283 11 22 chr20 26817824 26817916 -39850089 - MER5A DNA MER1_type -65 124 34 2259 79 0 4 chr20 26818338 26818616 -39849389 + AluY SINE Alu 33 309 -2 328 261 11 11 chr20 26818630 26818722 -39849283 + MER103 DNA DNA 4 95 -71 510 310 39 0 chr20 26819327 26819482 -39848523 + MER5A DNA MER1_type 29 189 0 310 247 37 0 chr20 26819941 26820022 -39847983 + MER5B DNA MER1_type 91 174 -4 586 229 110 8 chr20 26820337 26820573 -39847432 + MER76 LTR ERV 1 260 -428 255 294 28 28 chr20 26821524 26821633 -39846372 - MIR3 SINE MIR -93 115 7 271 227 93 0 chr20 26821657 26821732 -39846273 - L2 LINE L2 -19 3253 3172 1631 198 35 24 chr20 26821945 26822318 -39845687 + MLT1B LTR MaLR 1 377 -13 305 329 97 81 chr20 26822867 26823311 -39844694 + L1MEd LINE L1 693 1143 -4976 673 311 55 10 chr20 26823341 26823499 -39844506 + HAL1b LINE L1 292 441 -907 324 0 0 0 chr20 26823499 26823535 -39844470 + (TAAA)n Simple_repeat Simple_repeat 2 37 0 673 311 55 10 chr20 26823535 26823685 -39844320 + HAL1b LINE L1 441 614 -734 294 73 0 0 chr20 26824128 26824169 -39843836 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 1394 256 114 60 chr20 26824187 26825003 -39843002 + L1MC5 LINE L1 6651 7510 -451 1617 171 3 45 chr20 26825237 26825356 -39842649 + AluJo SINE Alu 27 149 -163 2266 120 0 3 chr20 26825356 26825655 -39842350 + AluSx SINE Alu 1 298 -14 1617 171 3 45 chr20 26825655 26825827 -39842178 + AluJo SINE Alu 149 306 -6 356 238 262 0 chr20 26825831 26825957 -39842048 - MER5A DNA MER1_type -27 162 4 206 62 31 0 chr20 26826099 26826131 -39841874 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 2238 94 0 4 chr20 26826135 26826411 -39841594 - AluSc SINE Alu -34 275 1 285 236 38 19 chr20 26826719 26826819 -39841186 - MLT1J LTR MaLR 0 595 450 835 270 80 26 chr20 26827139 26827450 -39840555 + MLT1A2 LTR MaLR 6 333 -41 449 262 159 0 chr20 26827713 26827858 -39840147 + MER5A DNA MER1_type 16 183 -6 278 330 36 0 chr20 26827881 26827993 -39840012 + L1MC5 LINE L1 7453 7568 -393 386 239 158 56 chr20 26828008 26828293 -39839712 + L1MC5 LINE L1 7616 7929 -32 4930 170 31 8 chr20 26829308 26830210 -39837795 - MER49 LTR ERV1 0 923 1 681 170 0 44 chr20 26830384 26830519 -39837486 + L1MCa LINE L1 21 149 -6277 3176 119 53 2 chr20 26830519 26831005 -39837000 - LTR1 LTR ERV1 0 785 275 6627 189 61 42 chr20 26831005 26832232 -39835773 + L1MCa LINE L1 888 2090 -4336 2109 128 7 0 chr20 26832232 26832529 -39835476 + AluSg SINE Alu 1 299 -11 6627 189 61 42 chr20 26832529 26834783 -39833222 + L1MCa LINE L1 2090 4433 -1993 1088 163 0 16 chr20 26834783 26834967 -39833038 + FRAM SINE Alu 1 174 -2 1015 250 10 7 chr20 26834967 26835275 -39832730 + L1MCa LINE L1 4456 4764 -1662 710 158 60 0 chr20 26835275 26835408 -39832597 + L1MC1 LINE L1 6188 6328 -5 249 219 68 14 chr20 26835797 26835870 -39832135 + L2 LINE L2 3150 3226 -46 222 37 0 0 chr20 26836251 26836278 -39831727 + (TG)n Simple_repeat Simple_repeat 2 28 0 255 61 0 0 chr20 26839387 26839420 -39828585 + (CA)n Simple_repeat Simple_repeat 2 34 0 591 283 44 49 chr20 26840770 26840996 -39827009 - MLT1J LTR MaLR -200 311 87 188 256 0 0 chr20 26843639 26843682 -39824323 - MIR SINE MIR -114 148 106 287 291 51 68 chr20 26845622 26845800 -39822205 + MIR SINE MIR 2 171 -37 681 171 0 0 chr20 26846303 26846478 -39821527 + (TG)n Simple_repeat Simple_repeat 2 176 0 182 283 0 33 chr20 26846802 26846862 -39821143 - MIR SINE MIR 0 262 205 215 250 65 15 chr20 26846987 26847117 -39820888 - L2 LINE L2 -308 3005 2872 261 320 113 13 chr20 26847262 26847412 -39820593 - MIR SINE MIR -21 241 77 519 304 136 19 chr20 26849412 26850131 -39817874 + L1M4c LINE L1 2276 3098 -3284 387 313 103 15 chr20 26850330 26850525 -39817480 + L1M4c LINE L1 3192 3403 -2979 536 294 93 15 chr20 26850689 26851070 -39816935 - L2 LINE L2 -129 3184 2768 639 88 0 0 chr20 26852551 26852642 -39815363 + (GA)n Simple_repeat Simple_repeat 1 91 0 201 74 0 0 chr20 26855394 26855421 -39812584 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2365 217 48 33 chr20 26857873 26858453 -39809552 - MLT1E LTR MaLR -4 589 1 671 257 19 12 chr20 26859050 26859253 -39808752 + ERVL LTR ERVL 4812 5012 -647 336 241 13 0 chr20 26860464 26860543 -39807462 + LTR16C LTR ERVL 75 154 -337 437 240 50 0 chr20 26861065 26861186 -39806819 + LTR16C LTR ERVL 350 476 -15 273 323 17 82 chr20 26861731 26861963 -39806042 - MIR SINE MIR -37 225 9 441 280 23 0 chr20 26862049 26862181 -39805824 - Charlie4a DNA MER1_type -14 494 360 3615 100 13 13 chr20 26862184 26862706 -39805299 - L1PB3 LINE L1 -6 6148 5627 478 209 50 7 chr20 26862712 26862851 -39805154 + L1P LINE L1 5089 5233 -913 1935 107 71 0 chr20 26862863 26863144 -39804861 - AluSx SINE Alu -11 301 1 530 288 152 28 chr20 26863146 26863469 -39804536 - Charlie4a DNA MER1_type -145 363 1 224 250 38 38 chr20 26863742 26863822 -39804183 + MER5A DNA MER1_type 88 167 -22 * 278 258 67 22 chr20 26863763 26863852 -39804153 - MER5A DNA MER1_type -95 94 2 221 41 41 41 chr20 26864378 26864427 -39803578 + (GGA)n Simple_repeat Simple_repeat 1 49 0 216 311 75 0 chr20 26864535 26864641 -39803364 - MIR SINE MIR -115 147 34 458 163 2 4 chr20 26866253 26866342 -39801663 - MLT1J2 LTR MaLR -309 138 50 1652 186 48 3 chr20 26867537 26867870 -39800135 + MER68 LTR ERV1 43 390 -172 361 136 45 0 chr20 26867874 26867940 -39800065 + MER68 LTR ERV1 322 390 -172 352 152 45 0 chr20 26867944 26868010 -39799995 + MER68 LTR ERV1 322 390 -172 321 167 45 0 chr20 26868014 26868080 -39799925 + MER68 LTR ERV1 322 390 -172 330 167 45 0 chr20 26868084 26868150 -39799855 + MER68 LTR ERV1 322 390 -172 1041 226 48 0 chr20 26868154 26868384 -39799621 + MER68 LTR ERV1 322 562 0 260 286 75 30 chr20 26869785 26869918 -39798087 + MIR3 SINE MIR 1 139 -69 367 325 6 0 chr20 26870099 26870256 -39797749 + MER103 DNA DNA 8 165 -1 2649 146 45 7 chr20 26871004 26871448 -39796557 - MER65C LTR ERV1 0 461 1 330 224 84 28 chr20 26871670 26871777 -39796228 + Charlie7 DNA MER1_type 45 157 -2455 827 226 28 0 chr20 26871964 26872141 -39795864 + MER5A DNA MER1_type 7 188 -1 1053 251 166 31 chr20 26872310 26872829 -39795176 + MLT1G LTR MaLR 1 589 -1 312 303 49 16 chr20 26872946 26873068 -39794937 - MIR3 SINE MIR -33 175 50 187 240 40 20 chr20 26873087 26873137 -39794868 + MIR SINE MIR 20 70 -192 455 274 202 23 chr20 26873899 26874219 -39793786 - MLT1J LTR MaLR -2 509 109 276 30 0 0 chr20 26877954 26877987 -39790018 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 1942 112 0 14 chr20 26877988 26878273 -39789732 - AluSq SINE Alu -32 281 1 180 156 0 0 chr20 26878950 26878982 -39789023 + MIR SINE MIR 118 149 -113 318 299 11 0 chr20 26879178 26879265 -39788740 + MER94 DNA DNA 18 105 -29 415 300 23 0 chr20 26880131 26880261 -39787744 + LTR16A LTR ERVL 138 270 -180 381 217 24 0 chr20 26880301 26880384 -39787621 + LTR16A LTR ERVL 366 450 0 233 351 36 0 chr20 26880432 26880543 -39787462 + (CATG)n Simple_repeat Simple_repeat 4 118 0 2144 123 3 0 chr20 26881815 26882125 -39785880 - AluSx SINE Alu -1 311 1 2377 74 0 3 chr20 26882218 26882530 -39785475 - AluY SINE Alu 0 311 1 380 233 78 24 chr20 26882582 26882697 -39785308 - MLT1G1 LTR MaLR -2 615 475 308 346 243 4 chr20 26883883 26884146 -39783859 + L1MC4 LINE L1 7402 7727 -315 2102 116 0 0 chr20 26884181 26884473 -39783532 + AluSg SINE Alu 1 292 -18 673 165 87 0 chr20 26884473 26884600 -39783405 + L1PA16 LINE L1 6020 6157 -9 21 0 0 0 chr20 26884631 26884652 -39783353 + AT_rich Low_complexity Low_complexity 1 21 0 291 364 7 36 chr20 26884659 26884799 -39783206 + L1MC4 LINE L1 7764 7899 -143 269 222 0 16 chr20 26884795 26884858 -39783147 + L1MC4a LINE L1 7747 7808 0 * 236 229 46 46 chr20 26885482 26885635 -39782370 + (CCCTA)n Simple_repeat Simple_repeat 2 154 0 181 326 116 11 chr20 26887064 26887159 -39780846 - MER5A DNA MER1_type -22 167 63 801 216 0 3 chr20 26887240 26887568 -39780437 + (TG)n Simple_repeat Simple_repeat 1 326 0 209 227 67 27 chr20 26887602 26887677 -39780328 - MER5A DNA MER1_type -100 89 12 1680 287 30 6 chr20 26890823 26891324 -39776681 - LTR45 LTR ERV1 -12 513 1 307 341 16 0 chr20 26891726 26891849 -39776156 + MER5B DNA MER1_type 53 177 -1 276 341 169 19 chr20 26893146 26893466 -39774539 - L2 LINE L2 -36 3277 2910 505 174 94 36 chr20 26893794 26893932 -39774073 + MLT1G LTR MaLR 148 293 -297 530 181 78 0 chr20 26893985 26894101 -39773904 + MLT1G LTR MaLR 461 585 -5 1962 149 67 15 chr20 26894802 26895145 -39772860 + MER46B DNA MER2_type 1 236 0 192 40 0 0 chr20 26896436 26896461 -39771544 + (GA)n Simple_repeat Simple_repeat 2 26 0 1500 229 59 61 chr20 26896710 26897220 -39770785 + L1MB5 LINE L1 5666 6174 0 1109 269 91 27 chr20 26898553 26899037 -39768968 - MLT1E2 LTR MaLR -1 625 111 1288 164 51 101 chr20 26899055 26899435 -39768570 - MLT1A1 LTR MaLR -8 449 1 271 114 0 23 chr20 26899490 26899534 -39768471 - MLT1E2 LTR MaLR -611 43 1 442 286 42 24 chr20 26899670 26899838 -39768167 - MIR SINE MIR -33 229 59 618 119 0 50 chr20 26900406 26900507 -39767498 + AluSg/x SINE Alu 208 303 -7 228 266 14 21 chr20 26901092 26901235 -39766770 + (CATATA)n Simple_repeat Simple_repeat 5 146 0 350 331 8 0 chr20 26901245 26901366 -39766639 + (CA)n Simple_repeat Simple_repeat 1 122 0 635 178 16 47 chr20 26901594 26901747 -39766258 + FLAM_A SINE Alu 1 133 0 539 233 14 48 chr20 26902253 26902399 -39765606 - MIR SINE MIR -44 218 78 1131 260 130 9 chr20 26902861 26903284 -39764721 + MLT1E2 LTR MaLR 137 610 -16 280 312 51 58 chr20 26903476 26903614 -39764391 + MIR SINE MIR 53 189 -73 1832 198 97 11 chr20 26903705 26904169 -39763836 + MLT1D LTR MaLR 2 505 0 588 265 25 25 chr20 26904924 26905086 -39762919 - MIR SINE MIR -70 192 31 1588 176 28 72 chr20 26905120 26905366 -39762639 + MLT1A2 LTR MaLR 1 225 -149 4148 155 78 7 chr20 26905366 26906097 -39761908 + LTR39 LTR ERV1 1 783 0 1588 176 28 72 chr20 26906097 26906237 -39761768 + MLT1A2 LTR MaLR 225 370 -4 229 318 123 7 chr20 26907194 26907348 -39760657 + MIR SINE MIR 29 200 -62 490 190 103 48 chr20 26908575 26908738 -39759267 + MIR SINE MIR 40 232 -30 363 155 36 83 chr20 26909800 26909884 -39758121 - MER116 DNA Mariner 0 80 1 250 255 43 11 chr20 26910335 26910429 -39757576 + (CCCA)n Simple_repeat Simple_repeat 2 98 0 288 226 65 0 chr20 26910715 26910777 -39757228 + MLT1L LTR MaLR 217 282 -333 1962 132 165 8 chr20 26910792 26911162 -39756843 - MSTA LTR MaLR 0 428 1 218 304 114 91 chr20 26911574 26911794 -39756211 - L3b LINE CR1 -40 1543 1319 2502 184 26 2 chr20 26911928 26912384 -39755621 + LTR24 LTR ERV1 1 467 0 432 280 34 40 chr20 26912447 26912622 -39755383 - MER104 DNA Tc2 -1 179 6 207 331 155 7 chr20 26914011 26914153 -39753852 + MIR3 SINE MIR 10 172 -36 4718 138 3 1 chr20 26915028 26915759 -39752246 + L1PA16 LINE L1 5423 6154 -12 24 32 0 0 chr20 26915766 26915797 -39752208 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr20 26916081 26916106 -39751899 + AT_rich Low_complexity Low_complexity 1 25 0 2002 109 17 17 chr20 26916234 26916536 -39751469 + LTR8 LTR ERV1 390 691 0 499 227 172 0 chr20 26917060 26917223 -39750782 + MER21B LTR ERV1 613 803 -60 503 241 6 0 chr20 26917594 26917756 -39750249 + (TG)n Simple_repeat Simple_repeat 2 164 0 362 242 58 33 chr20 26917982 26918102 -39749903 + MER94 DNA DNA 1 123 -11 324 0 0 0 chr20 26918249 26918285 -39749720 + (TTTA)n Simple_repeat Simple_repeat 2 37 0 25571 127 12 18 chr20 26918285 26918617 -39749388 - L1PA8 LINE L1 -17 6155 5822 1900 96 31 8 chr20 26918617 26918877 -39749128 - AluY SINE Alu -7 304 39 25571 127 12 18 chr20 26918877 26922856 -39745149 - L1PA8 LINE L1 -350 5822 1886 2176 88 0 0 chr20 26922856 26923119 -39744886 - AluY SINE Alu -16 295 33 25571 127 12 18 chr20 26923119 26924105 -39743900 - L1PA8 LINE L1 -4286 1886 895 412 226 10 10 chr20 26924903 26925019 -39742986 - MER97a DNA MER1_type? 0 894 803 1863 203 46 110 chr20 26925019 26925102 -39742903 + L1M4 LINE L1 4766 4853 -1331 2214 122 0 3 chr20 26925102 26925396 -39742609 - AluSp SINE Alu -19 294 2 1863 203 46 110 chr20 26925396 26925961 -39742044 + L1M4 LINE L1 4853 5453 -731 189 0 0 0 chr20 26925961 26925982 -39742023 + (CACCT)n Simple_repeat Simple_repeat 3 23 0 1863 203 46 110 chr20 26925982 26926016 -39741989 + L1M4 LINE L1 5453 5488 -696 1490 212 0 34 chr20 26926016 26926309 -39741696 + AluJo SINE Alu 1 283 -29 1863 203 46 110 chr20 26926309 26926522 -39741483 + L1M4 LINE L1 5488 5601 -583 2871 178 64 70 chr20 26926522 26927253 -39740752 - LTR8A LTR ERV1 0 727 1 1863 203 46 110 chr20 26927253 26927331 -39740674 + L1M4 LINE L1 5601 5682 -502 272 179 51 0 chr20 26927304 26927380 -39740625 + L1ME1 LINE L1 6096 6183 -1 * 409 171 62 23 chr20 26927383 26927512 -39740493 - MER97a DNA MER1_type? -84 810 677 1846 130 52 50 chr20 26927513 26927952 -39740053 + LTR56 LTR ERV1 2 437 0 582 216 26 31 chr20 26927952 26928140 -39739865 - MER97a DNA MER1_type? -218 676 490 2298 212 37 88 chr20 26928156 26928887 -39739118 + LTR8A LTR ERV1 34 727 0 623 276 64 58 chr20 26928888 26929200 -39738805 - MER97c DNA MER1_type? -598 492 179 * 2972 154 58 23 chr20 26929144 26929715 -39738290 - LTR59 LTR ERV1 -6 591 1 925 187 79 10 chr20 26929722 26929925 -39738080 - MER97b DNA MER1_type? -798 255 39 454 284 43 25 chr20 26930344 26930506 -39737499 + MIR3 SINE MIR 16 180 -28 2582 172 71 69 chr20 26930710 26931403 -39736602 + LTR8A LTR ERV1 34 727 0 4706 83 84 9 chr20 26932565 26933205 -39734800 - LTR12 LTR ERV1 0 688 1 330 351 163 25 chr20 26933567 26933812 -39734193 + L3 LINE CR1 702 980 -597 414 304 92 20 chr20 26934247 26934497 -39733508 + L2 LINE L2 2589 2856 -458 232 307 109 0 chr20 26934715 26934816 -39733189 + L2 LINE L2 3117 3228 -44 576 77 0 0 chr20 26934970 26935048 -39732957 + (TGGA)n Simple_repeat Simple_repeat 1 78 0 302 290 28 37 chr20 26936189 26936296 -39731709 - MIR SINE MIR -103 159 54 381 317 111 10 chr20 26936529 26936737 -39731268 + L1MEd LINE L1 444 672 -5447 222 184 26 0 chr20 26936752 26936790 -39731215 - MER5A DNA MER1_type -136 53 15 357 226 0 54 chr20 26937131 26937224 -39730781 + L1MEd LINE L1 2214 2301 -3828 331 246 112 0 chr20 26937533 26937667 -39730338 + L1MEd LINE L1 2732 2880 -3249 1156 141 78 36 chr20 26937762 26938076 -39729929 + THE1C LTR MaLR 1 375 0 6124 124 17 53 chr20 26938078 26939154 -39728851 + THE1C-int LTR MaLR 3 1039 -541 919 158 16 49 chr20 26939154 26939337 -39728668 + THE1B LTR MaLR 153 329 -35 774 199 104 56 chr20 26939337 26939624 -39728381 - MLT1A2 LTR MaLR -73 301 1 937 230 31 27 chr20 26940154 26940415 -39727590 - MLT1F1 LTR MaLR -1 566 305 1365 227 81 17 chr20 26940444 26940854 -39727151 + L1MEc LINE L1 419 854 -5542 2188 128 0 7 chr20 26941058 26941362 -39726643 + AluSx SINE Alu 1 302 -10 283 272 182 30 chr20 26942556 26942891 -39725114 - MLT1H LTR MaLR -28 521 136 1965 187 15 0 chr20 26943668 26944011 -39723994 + MER7A DNA MER2_type 1 346 0 2679 214 100 13 chr20 26944018 26944690 -39723315 - L1MB7 LINE L1 0 6184 5455 385 214 177 38 chr20 26944923 26945211 -39722794 + MLT1G LTR MaLR 109 528 -62 353 206 302 8 chr20 26949741 26949867 -39718138 - MIR SINE MIR -69 193 31 708 241 36 20 chr20 26949932 26950127 -39717878 - L1ME1 LINE L1 -18 6148 5951 1844 161 0 10 chr20 26950143 26950454 -39717551 - AluJb SINE Alu 0 312 5 1895 217 20 4 chr20 26950749 26951200 -39716805 + L1MB4 LINE L1 4929 5386 -760 777 183 0 8 chr20 26951201 26951327 -39716678 + AluSq/x SINE Alu 2 126 -187 4722 161 8 5 chr20 26951342 26952137 -39715868 + L1MB4 LINE L1 5374 6170 -10 408 136 62 0 chr20 26952152 26952233 -39715772 + L1MB8 LINE L1 6093 6178 0 198 0 0 0 chr20 26952400 26952422 -39715583 + (A)n Simple_repeat Simple_repeat 1 22 0 1715 51 5 0 chr20 26952456 26952671 -39715334 - L1PA4 LINE L1 -5 6150 5935 2178 25 0 0 chr20 26952671 26952916 -39715089 + L1P2 LINE L1 5474 5718 -437 370 328 91 21 chr20 26953945 26954186 -39713819 + MLT1L LTR MaLR 50 307 -242 467 269 35 45 chr20 26955168 26955369 -39712636 + MLT1L LTR MaLR 130 328 -287 595 246 56 16 chr20 26955471 26955672 -39712333 + MLT1L LTR MaLR 327 539 -52 973 238 70 3 chr20 26955720 26956006 -39711999 + L1M4 LINE L1 3627 3931 -2215 392 250 28 9 chr20 26956047 26956155 -39711850 + L1ME3A LINE L1 6056 6165 -5 430 213 130 32 chr20 26956507 26956723 -39711282 + L1ME LINE L1 3731 3967 -2179 12239 184 38 57 chr20 26956723 26959142 -39708863 + L1MB3 LINE L1 24 2345 -4037 771 225 184 44 chr20 26959142 26959462 -39708543 - MLT1A1 LTR MaLR 0 365 1 12239 184 38 57 chr20 26959462 26961016 -39706989 + L1MB3 LINE L1 2345 3926 -2456 4735 198 36 55 chr20 26961015 26963244 -39704761 + L1MB3 LINE L1 4171 6357 -62 * 2043 129 0 0 chr20 26963244 26963547 -39704458 + AluSx SINE Alu 1 303 -9 4735 198 36 55 chr20 26963547 26963608 -39704397 + L1MB3 LINE L1 6357 6418 -1 971 267 98 82 chr20 26963623 26965228 -39702777 + L1ME LINE L1 3947 5565 -597 232 284 88 0 chr20 26965498 26965600 -39702405 + L1MC4 LINE L1 7927 8037 -5 267 291 111 0 chr20 26967528 26967645 -39700360 + L1ME LINE L1 6 135 -5935 494 259 48 0 chr20 26967932 26968079 -39699926 + MER5A DNA MER1_type 33 186 -3 469 248 57 69 chr20 26968810 26969072 -39698933 + MIR SINE MIR 3 261 -1 1947 194 38 0 chr20 26969145 26969537 -39698468 + MER65C LTR ERV1 1 407 -54 * 2100 125 142 5 chr20 26969529 26969896 -39698109 - MSTA LTR MaLR -11 417 1 334 185 25 12 chr20 26969896 26969977 -39698028 + MER65C LTR ERV1 380 461 0 219 173 136 74 chr20 26970185 26970266 -39697739 + L3 LINE CR1 1081 1166 -411 375 266 25 89 chr20 26970746 26970983 -39697022 + L1MC5 LINE L1 7690 7911 -50 1785 210 94 16 chr20 26971082 26971506 -39696499 + LTR32 LTR ERVL 15 471 0 3931 197 61 12 chr20 26971512 26972287 -39695718 - MER21B LTR ERV1 -40 823 11 383 268 45 71 chr20 26972505 26972703 -39695302 + LTR56 LTR ERV1 22 214 -231 1922 178 70 31 chr20 26972725 26973284 -39694721 - LTR27 LTR ERV1 0 636 3 724 138 9 0 chr20 26973286 26973395 -39694610 - LTR27-int LTR ERV1 -1 7090 6981 * 899 104 15 0 chr20 26973392 26973527 -39694478 - MER61-int LTR ERV1 -2077 3140 3004 1613 135 40 4 chr20 26973529 26973791 -39694214 - LTR28 LTR ERV1 -768 802 1 454 275 55 10 chr20 26973791 26973999 -39694006 + LTR56 LTR ERV1 250 437 0 430 153 59 0 chr20 26974402 26974487 -39693518 + LTR39 LTR ERV1 1 90 -693 42836 41 24 1 chr20 26974744 26980757 -39687248 + L1PA2 LINE L1 4 6155 0 2990 233 55 10 chr20 26980826 26981777 -39686228 + L1ME2 LINE L1 5160 6155 -9 6247 87 5 4 chr20 26981836 26982660 -39685345 + L1PA11 LINE L1 5346 6170 -4 22 0 0 0 chr20 26982690 26982712 -39685293 + AT_rich Low_complexity Low_complexity 1 22 0 1100 233 50 82 chr20 26982726 26983103 -39684902 + MSTD LTR MaLR 32 396 0 205 269 176 8 chr20 26984983 26985102 -39682903 + MER5A DNA MER1_type 1 139 -50 212 211 39 19 chr20 26985969 26986021 -39681984 + MER5A DNA MER1_type 49 101 -88 4290 149 115 10 chr20 26986022 26986821 -39681184 + MER4D LTR ERV1 4 886 -17 587 244 152 11 chr20 26987259 26987598 -39680407 - MER89 LTR ERV1 -70 489 2 5400 59 1 1 chr20 26987978 26988638 -39679367 + PABL_A LTR ERV1 1 660 0 316 284 24 47 chr20 26988787 26988914 -39679091 + MLT1E2 LTR MaLR 113 236 -390 223 291 0 18 chr20 26988972 26989082 -39678923 + C-rich Low_complexity Low_complexity 4 111 0 228 257 71 14 chr20 26989759 26989829 -39678176 - LTR16A LTR ERVL -289 161 88 683 153 36 7 chr20 26990476 26990613 -39677392 - MER53 DNA DNA -7 182 42 307 294 81 31 chr20 26990939 26991181 -39676824 - MLT1K LTR MaLR 0 615 323 996 228 160 19 chr20 26991768 26992285 -39675720 + MLT1G1 LTR MaLR 17 589 -1 229 243 153 72 chr20 26993145 26993256 -39674749 + MIR SINE MIR 28 147 -115 454 163 54 11 chr20 26993274 26993366 -39674639 + L1MA8 LINE L1 6055 6150 -141 1726 204 41 60 chr20 26993450 26993867 -39674138 + LTR2 LTR ERV1 41 449 0 15627 79 3 5 chr20 26993867 26995860 -39672145 + HERVE LTR ERV1 1 1989 -5824 31951 40 0 8 chr20 26995862 27002048 -39665957 + L1PA4 LINE L1 26 6155 0 35318 66 28 7 chr20 27002083 27006718 -39661287 + HERVE LTR ERV1 1975 6705 -1108 1162 80 0 0 chr20 27006720 27006871 -39661134 + HERVE LTR ERV1 6930 7080 -733 1360 227 48 3 chr20 27006871 27007166 -39660839 + LTR2 LTR ERV1 142 449 0 516 186 16 39 chr20 27007178 27007307 -39660698 + L1MA8 LINE L1 6164 6289 -2 261 292 167 7 chr20 27008090 27008234 -39659771 + MIR SINE MIR 93 259 -3 280 207 24 49 chr20 27009037 27009119 -39658886 - MER103 DNA DNA -65 101 22 796 233 122 21 chr20 27009635 27009970 -39658035 - L1MC4 LINE L1 -967 7075 6707 1144 231 150 66 chr20 27009997 27010543 -39657462 + MLT1E LTR MaLR 1 592 -1 650 207 53 18 chr20 27011310 27011479 -39656526 - MER5A DNA MER1_type -6 183 9 195 162 0 0 chr20 27011496 27011533 -39656472 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 411 297 6 22 chr20 27011608 27011790 -39656215 + (CA)n Simple_repeat Simple_repeat 2 180 0 21784 179 44 15 chr20 27011873 27015997 -39652008 - ERVL-B1 LTR ERVL -1501 4263 20 1814 176 71 77 chr20 27016017 27016540 -39651465 - MLT2B1 LTR ERVL 0 520 1 185 237 0 13 chr20 27016634 27016710 -39651295 + (CA)n Simple_repeat Simple_repeat 2 76 0 218 346 20 0 chr20 27017694 27017795 -39650210 - MIR SINE MIR -132 130 28 298 65 0 0 chr20 27018175 27018221 -39649784 - L1PA7 LINE L1 -4854 1607 1562 27514 85 11 1 chr20 27018228 27023047 -39644958 + L1PA7 LINE L1 1609 6469 0 272 157 20 0 chr20 27024241 27024292 -39643713 - MIR SINE MIR -134 128 77 206 222 48 16 chr20 27024382 27024445 -39643560 - MIR SINE MIR -59 149 85 551 208 0 0 chr20 27026380 27026481 -39641524 - MIR SINE MIR -115 147 47 1045 206 100 5 chr20 27027311 27027597 -39640408 - LTR26B LTR ERV1 -19 512 235 489 191 21 0 chr20 27027592 27027686 -39640319 - LTR26E LTR ERV1 -526 96 1 * 429 185 115 55 chr20 27028800 27029000 -39639005 + HAL1b LINE L1 910 1121 -227 303 267 162 0 chr20 27029000 27029105 -39638900 + L1ME4a LINE L1 5997 6118 -3 180 0 0 0 chr20 27029176 27029196 -39638809 + (CAA)n Simple_repeat Simple_repeat 2 21 0 210 267 33 0 chr20 27029457 27029517 -39638488 + MER5A DNA MER1_type 30 91 -98 2551 48 0 0 chr20 27029585 27029877 -39638128 - AluY SINE Alu -9 302 11 355 284 6 33 chr20 27031124 27031307 -39636698 + G-rich Low_complexity Low_complexity 1 178 0 185 93 0 74 chr20 27033486 27033540 -39634465 + (TA)n Simple_repeat Simple_repeat 1 50 0 276 299 94 0 chr20 27033542 27033669 -39634336 + L1MC4 LINE L1 7904 8042 0 180 210 65 65 chr20 27034882 27034944 -39633061 + MIR SINE MIR 85 146 -62 201 237 244 46 chr20 27038881 27039012 -39628993 + L3 LINE CR1 1321 1477 -100 1361 221 148 49 chr20 27039942 27040477 -39627528 + L1MC4 LINE L1 6469 7056 -986 1159 302 89 17 chr20 27040500 27041085 -39626920 + L1MC4 LINE L1 7196 7903 -139 2319 109 0 3 chr20 27041150 27041453 -39626552 + AluSx SINE Alu 1 302 -10 318 178 25 127 chr20 27041621 27041739 -39626266 - L2 LINE L2 -28 3285 3180 355 273 79 14 chr20 27041764 27041903 -39626102 - MIR SINE MIR -48 214 67 426 287 88 6 chr20 27044904 27045085 -39622920 - MIR SINE MIR -45 217 22 214 282 10 39 chr20 27045185 27045288 -39622717 + GA-rich Low_complexity Low_complexity 5 104 0 296 289 130 16 chr20 27047051 27047254 -39620751 + HAL1b LINE L1 1198 1348 0 645 154 0 27 chr20 27048309 27048419 -39619586 + U6 snRNA snRNA 1 107 0 1600 190 20 2 chr20 27048420 27049046 -39618959 + L1MC1 LINE L1 2194 2831 -3595 * 6039 179 26 39 chr20 27049040 27051545 -39616460 + L1MC1 LINE L1 4146 6613 0 193 332 124 9 chr20 27053414 27053640 -39614365 + L2 LINE L2 1372 1623 -1691 589 281 202 25 chr20 27053661 27054343 -39613662 + L2 LINE L2 2482 3308 -5 330 339 138 34 chr20 27055237 27055535 -39612470 + L3 LINE CR1 267 595 -982 764 203 51 6 chr20 27059542 27059744 -39608261 + MLT1D LTR MaLR 325 503 -2 1477 231 76 18 chr20 27059772 27060230 -39607775 + MLT1D-int LTR MaLR 11 495 -876 181 276 95 19 chr20 27060855 27060960 -39607045 - MIR SINE MIR -59 149 37 706 229 73 0 chr20 27061077 27061256 -39606749 - L1MB5 LINE L1 -225 5949 5758 1591 201 0 29 chr20 27061259 27061567 -39606438 - AluJo SINE Alu -13 299 1 971 156 5 47 chr20 27061592 27061784 -39606221 + L1MB5 LINE L1 5991 6174 0 584 204 8 0 chr20 27061794 27061926 -39606079 + L1MB7 LINE L1 6043 6175 -9 420 163 267 0 chr20 27062988 27063074 -39604931 + MER3 DNA MER1_type 3 111 -98 240 303 207 11 chr20 27063109 27063297 -39604708 - L3 LINE CR1 -554 1023 799 478 167 135 0 chr20 27065472 27065568 -39602437 - MER81 DNA DNA 0 114 6 254 265 54 75 chr20 27067626 27067773 -39600232 - L2 LINE L2 -42 3271 3128 214 365 133 8 chr20 27068170 27068419 -39599586 + L2 LINE L2 2804 3083 -189 924 167 76 48 chr20 27069039 27069249 -39598756 - MER20 DNA MER1_type -3 216 1 229 139 0 0 chr20 27069892 27069935 -39598070 + L1MA3 LINE L1 6263 6305 0 210 274 105 48 chr20 27069957 27070081 -39597924 - L2 LINE L2 -2808 506 376 391 157 0 14 chr20 27071464 27071534 -39596471 + Tigger2 DNA MER2_type 1 69 -2649 2620 113 15 5 chr20 27071541 27071949 -39596056 + Tigger2 DNA MER2_type 2307 2718 0 249 274 32 0 chr20 27072987 27073049 -39594956 - L2 LINE L2 -5 3308 3245 566 197 137 0 chr20 27073571 27073688 -39594317 - MER5B DNA MER1_type 0 178 46 331 301 110 1 chr20 27073976 27074129 -39593876 + L1ME3 LINE L1 5980 6145 -17 190 227 0 23 chr20 27074339 27074383 -39593622 + MER5A DNA MER1_type 45 87 -102 682 170 37 7 chr20 27074619 27074754 -39593251 + MER20 DNA MER1_type 1 139 -80 1848 147 13 37 chr20 27074951 27075251 -39592754 - AluJb SINE Alu -19 293 1 7224 52 0 1 chr20 27075340 27076785 -39591220 - L1PA5 LINE L1 -1 6153 4703 318 283 22 25 chr20 27076890 27077048 -39590957 + LTR16C LTR ERVL 304 491 0 1200 282 63 69 chr20 27077050 27078174 -39589831 + L1MEd LINE L1 1083 2212 -3917 796 189 0 0 chr20 27078174 27078306 -39589699 + FLAM_A SINE Alu 2 133 0 1200 282 63 69 chr20 27078306 27078937 -39589068 + L1MEd LINE L1 2212 2850 -3279 2359 104 0 0 chr20 27078937 27079234 -39588771 + AluSx SINE Alu 1 297 -15 1200 282 63 69 chr20 27079234 27079293 -39588712 + L1MEd LINE L1 2850 2908 -3221 497 176 89 3 chr20 27079756 27079892 -39588113 - MLT1A2 LTR MaLR 0 390 224 281 234 128 11 chr20 27080105 27080199 -39587806 + MER3 DNA MER1_type 83 187 -22 263 241 101 25 chr20 27083775 27083854 -39584151 + MIR SINE MIR 60 144 -64 503 257 81 0 chr20 27084433 27084569 -39583436 + L2 LINE L2 3167 3313 0 351 274 49 0 chr20 27084615 27084717 -39583288 + L2 LINE L2 2951 3057 -215 325 292 25 8 chr20 27085141 27085261 -39582744 + L1ME3 LINE L1 5375 5496 -666 240 316 101 34 chr20 27088947 27089156 -39578849 - MIR SINE MIR -19 243 21 2180 94 50 3 chr20 27089438 27089735 -39578270 - AluSx SINE Alu -1 311 1 370 336 124 13 chr20 27090010 27090460 -39577545 + L1ME3 LINE L1 5552 6051 -111 1074 133 6 61 chr20 27091117 27091297 -39576708 - AluJb SINE Alu -7 305 136 1394 193 149 17 chr20 27092204 27092552 -39575453 + MSTD LTR MaLR 1 394 -2 484 253 80 35 chr20 27092664 27092850 -39575155 + MIR SINE MIR 15 203 -59 699 129 10 0 chr20 27093678 27093779 -39574226 - FRAM SINE Alu -32 144 43 231 242 16 0 chr20 27096029 27096091 -39571914 + L1MC5 LINE L1 7316 7378 -583 2011 138 0 14 chr20 27096213 27096496 -39571509 + AluSx SINE Alu 1 279 -33 318 26 0 0 chr20 27096499 27096538 -39571467 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 299 330 19 0 chr20 27098703 27098806 -39569199 + LTR16C LTR ERVL 191 295 -196 1878 224 93 22 chr20 27099584 27100151 -39567854 - MLT1E2 LTR MaLR 0 626 1 828 280 102 58 chr20 27100381 27100855 -39567150 + MLT1G LTR MaLR 16 549 0 652 220 8 0 chr20 27101167 27101299 -39566706 + MIR SINE MIR 2 134 -128 7256 192 49 16 chr20 27101311 27102818 -39565187 + L1MB4 LINE L1 3515 5302 -878 1942 103 0 11 chr20 27102818 27103090 -39564915 + AluSc SINE Alu 41 309 0 7256 192 49 16 chr20 27103090 27103970 -39564035 + L1MB4 LINE L1 5302 6151 -29 287 206 10 98 chr20 27103976 27104078 -39563927 + MIR SINE MIR 142 234 -28 191 250 0 0 chr20 27104049 27104085 -39563920 + L2 LINE L2 3251 3286 -27 * 3182 160 45 2 chr20 27105363 27105895 -39562110 + MER41D LTR ERV1 3 557 0 339 250 12 0 chr20 27106375 27106459 -39561546 + MLT1K LTR MaLR 169 253 -335 447 310 159 45 chr20 27108234 27108713 -39559292 - L3 LINE CR1 -7 1570 1147 2257 81 3 10 chr20 27108713 27109009 -39558996 - AluSp SINE Alu -19 294 1 447 310 159 45 chr20 27109009 27109020 -39558985 - L3 LINE CR1 -430 1147 1139 2257 89 0 10 chr20 27109020 27109333 -39558672 - AluY SINE Alu -1 310 1 447 310 159 45 chr20 27109333 27109549 -39558456 - L3 LINE CR1 -438 1139 949 2115 109 7 0 chr20 27109549 27109842 -39558163 - AluSx SINE Alu -17 295 1 447 310 159 45 chr20 27109842 27109968 -39558037 - L3 LINE CR1 -628 949 641 1993 142 10 3 chr20 27110811 27111121 -39556884 + AluSx SINE Alu 1 312 0 403 99 14 14 chr20 27111124 27111195 -39556810 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 287 303 139 0 chr20 27111272 27111394 -39556611 + L2 LINE L2 3172 3310 -3 252 282 28 0 chr20 27112474 27112545 -39555460 + MIR SINE MIR 117 189 -73 614 284 34 38 chr20 27113201 27113440 -39554565 - MIR SINE MIR -10 252 15 411 267 139 22 chr20 27114695 27114875 -39553130 + MER63A DNA MER1_type 1 201 -9 2513 50 0 0 chr20 27115117 27115414 -39552591 + AluY SINE Alu 3 299 -12 321 242 91 0 chr20 27117083 27117182 -39550823 - MIR SINE MIR -65 143 36 280 250 265 1 chr20 27117933 27118066 -39549939 - MIR3 SINE MIR -19 189 19 1441 162 64 17 chr20 27118484 27118781 -39549224 + AluJb SINE Alu 1 311 -1 232 262 47 56 chr20 27119324 27119431 -39548574 - MIR SINE MIR -61 147 42 2014 123 0 46 chr20 27120055 27120379 -39547626 - AluSx SINE Alu -3 309 1 196 248 21 90 chr20 27121395 27121540 -39546465 + L2 LINE L2 2921 3055 -217 245 204 0 0 chr20 27121581 27121625 -39546380 + MLT1I LTR MaLR 359 402 -7 256 276 313 0 chr20 27122557 27122691 -39545314 - MER5B DNA MER1_type 0 178 3 413 221 98 8 chr20 27123845 27123967 -39544038 - MIR SINE MIR -104 158 26 345 149 45 15 chr20 27124339 27124406 -39543599 + Charlie8 DNA MER1_type 97 165 -2252 233 204 37 0 chr20 27124533 27124587 -39543418 + MER5A DNA MER1_type 47 102 -87 404 212 233 0 chr20 27125610 27125756 -39542249 - MER5A DNA MER1_type 0 189 10 248 242 0 11 chr20 27126280 27126371 -39541634 + GA-rich Low_complexity Low_complexity 3 92 0 1917 135 3 7 chr20 27127199 27127503 -39540502 - AluJo SINE Alu -9 303 1 438 232 195 12 chr20 27128695 27128859 -39539146 + MLT1G LTR MaLR 202 395 -195 1151 170 62 1 chr20 27128882 27129307 -39538698 + LTR54 LTR ERV1 1 510 0 609 244 8 0 chr20 27129307 27129434 -39538571 + MLT1G LTR MaLR 463 590 0 910 220 21 5 chr20 27129673 27129859 -39538146 - MER5A DNA MER1_type 0 189 1 25 31 0 0 chr20 27131661 27131693 -39536312 + GC_rich Low_complexity Low_complexity 1 32 0 328 250 0 0 chr20 27133065 27133137 -39534868 + MIR SINE MIR 79 150 -112 832 178 33 33 chr20 27133621 27133801 -39534204 - FRAM SINE Alu -2 174 1 258 294 24 0 chr20 27133863 27133948 -39534057 - MIR SINE MIR -73 135 49 569 285 224 11 chr20 27134178 27134553 -39533452 + MLT1G1 LTR MaLR 141 595 0 1081 283 191 14 chr20 27134586 27135226 -39532779 + L2 LINE L2 2055 2807 -507 430 207 201 6 chr20 27135232 27135382 -39532623 + MER5A DNA MER1_type 6 189 0 * 556 270 113 35 chr20 27135382 27135747 -39532258 + L2 LINE L2 2827 3220 -93 216 301 97 0 chr20 27136404 27136507 -39531498 - MIR SINE MIR -87 175 63 406 231 69 103 chr20 27138514 27138717 -39529288 + MIR3 SINE MIR 13 208 0 606 12 36 0 chr20 27140377 27140460 -39527545 + (TAGA)n Simple_repeat Simple_repeat 4 89 0 351 272 129 45 chr20 27140946 27141181 -39526824 + L1MCa LINE L1 2234 2488 -3940 492 96 44 22 chr20 27141228 27141364 -39526641 + (CA)n Simple_repeat Simple_repeat 2 140 0 662 120 44 25 chr20 27141376 27142036 -39525969 + (CA)n Simple_repeat Simple_repeat 1 672 0 486 167 49 6 chr20 27142048 27142210 -39525795 + (CA)n Simple_repeat Simple_repeat 2 170 0 407 301 50 10 chr20 27142224 27142503 -39525502 + L1M2 LINE L1 1265 1787 -4429 369 283 33 0 chr20 27142479 27142599 -39525406 + L1MEc LINE L1 1547 1670 -4726 * 23 33 0 0 chr20 27143069 27143099 -39524906 + AT_rich Low_complexity Low_complexity 1 30 0 348 274 169 20 chr20 27143099 27143453 -39524552 + L1MEc LINE L1 2200 2606 -3609 2625 149 10 0 chr20 27144052 27144449 -39523556 - MER57A LTR ERV1 0 403 3 1527 131 54 0 chr20 27144779 27145039 -39522966 + L1MA8 LINE L1 6012 6285 -6 856 177 20 0 chr20 27145464 27145611 -39522394 + FRAM SINE Alu 1 148 -28 365 309 95 28 chr20 27146356 27146749 -39521256 - L1M4 LINE L1 -1104 5042 4624 44 0 0 0 chr20 27147358 27147402 -39520603 + AT_rich Low_complexity Low_complexity 1 44 0 578 293 76 27 chr20 27147583 27147846 -39520159 + MLT1L LTR MaLR 12 287 -328 531 235 102 27 chr20 27148254 27148441 -39519564 - MIR SINE MIR 0 262 62 212 51 0 51 chr20 27150693 27150732 -39517273 + (TAAAAA)n Simple_repeat Simple_repeat 1 37 0 233 305 0 0 chr20 27152533 27152611 -39515394 + (TATATG)n Simple_repeat Simple_repeat 1 78 0 820 244 28 52 chr20 27153772 27154022 -39513983 - MIR SINE MIR -6 256 13 328 311 128 18 chr20 27154107 27154271 -39513734 + MER5A DNA MER1_type 7 188 -1 620 225 165 32 chr20 27154487 27154772 -39513233 + MER33 DNA MER1_type 2 324 0 210 37 0 0 chr20 27156482 27156509 -39511496 + (CACCC)n Simple_repeat Simple_repeat 5 31 0 2201 90 10 0 chr20 27159395 27159696 -39508309 + AluSp SINE Alu 3 306 -7 246 325 90 52 chr20 27159714 27160003 -39508002 + LTR16C LTR ERVL 24 323 -168 262 256 172 62 chr20 27160037 27160281 -39507724 + LTR16A1 LTR ERVL 6 271 -179 664 291 13 43 chr20 27160803 27161033 -39506972 - MIR SINE MIR -4 258 36 1756 176 12 95 chr20 27161116 27161548 -39506457 + MSTD LTR MaLR 1 396 0 216 97 0 0 chr20 27161669 27161700 -39506305 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 540 219 128 26 chr20 27162401 27162639 -39505366 - MLT1F1 LTR MaLR 0 555 282 242 246 31 0 chr20 27162666 27162731 -39505274 - MLT1F1 LTR MaLR -402 188 122 629 216 131 27 chr20 27162746 27162968 -39505037 + ORSL DNA AcHobo 4 248 -27 666 253 51 0 chr20 27163391 27163569 -39504436 + MER5A DNA MER1_type 1 187 -2 369 317 109 10 chr20 27163827 27164029 -39503976 - MIR SINE MIR -4 258 37 244 162 44 15 chr20 27164283 27164351 -39503654 + CT-rich Low_complexity Low_complexity 2 71 0 410 205 62 0 chr20 27165354 27165466 -39502539 + LTR16C LTR ERVL 372 490 -1 194 283 71 0 chr20 27165467 27165566 -39502439 + L2 LINE L2 3153 3258 -14 397 76 33 130 chr20 27166552 27166644 -39501361 - MER4B LTR ERV1 -527 83 1 4421 232 17 29 chr20 27166659 27167265 -39500740 + L1MC2 LINE L1 2453 3065 -3081 2156 123 3 0 chr20 27167265 27167575 -39500430 + AluSx SINE Alu 1 311 -1 4421 232 17 29 chr20 27167575 27168316 -39499689 + L1MC2 LINE L1 3065 3784 -2362 1079 184 18 58 chr20 27168317 27168594 -39499411 + AluJo SINE Alu 2 267 -45 2017 248 43 12 chr20 27168595 27168645 -39499360 + L1 LINE L1 2037 2084 -4062 2117 114 0 7 chr20 27168645 27168944 -39499061 + AluSx SINE Alu 1 297 -15 2017 248 43 12 chr20 27168944 27169664 -39498341 + L1 LINE L1 2084 4026 -2120 369 172 0 16 chr20 27169690 27169754 -39498251 - MSTA-int LTR MaLR -1588 63 1 1965 157 123 23 chr20 27169754 27170143 -39497862 - MSTA LTR MaLR 0 428 1 302 68 0 0 chr20 27170143 27170187 -39497818 + L1MA3 LINE L1 6262 6305 0 5046 207 33 16 chr20 27170197 27172269 -39495736 + L1MC2 LINE L1 4013 6117 -227 805 160 8 0 chr20 27172270 27172395 -39495610 + FLAM_C SINE Alu 1 126 -17 1096 118 56 6 chr20 27172407 27172585 -39495420 + L1MC2 LINE L1 6107 6293 -51 284 259 93 19 chr20 27172617 27172725 -39495280 - L1MEd LINE L1 -5908 211 96 2287 62 10 7 chr20 27172880 27173187 -39494818 + AluY SINE Alu 1 308 -3 942 163 59 68 chr20 27174915 27175136 -39492869 + MER20 DNA MER1_type 1 219 0 335 164 15 30 chr20 27175848 27175915 -39492090 - LTR67 LTR ERVL -8 549 484 2272 165 25 42 chr20 27175931 27175999 -39492006 - MSTB LTR MaLR -2 424 356 2005 104 0 17 chr20 27175999 27176340 -39491665 - AluSx SINE Alu 0 336 1 2272 165 25 42 chr20 27176340 27176701 -39491304 - MSTB LTR MaLR -70 356 1 2650 132 90 0 chr20 27177193 27177639 -39490366 + LTR19A LTR ERV1 1 486 0 232 261 14 14 chr20 27179163 27179232 -39488773 + MLT1G1 LTR MaLR 525 593 -2 388 245 161 7 chr20 27179242 27179385 -39488620 - Charlie2b DNA MER1_type -107 2675 2511 41708 69 2 3 chr20 27179385 27185176 -39482829 + L1PA5 LINE L1 4 5784 -370 7260 35 0 0 chr20 27185175 27186036 -39481969 - L1PA3 LINE L1 -1078 5068 4208 * 7873 18 6 0 chr20 27186036 27187116 -39480889 + L1PA3 LINE L1 5071 6155 0 2990 67 0 3 chr20 27187116 27187528 -39480477 + L1PA5 LINE L1 5770 6180 0 2400 237 95 55 chr20 27187739 27187939 -39480066 - Charlie2b DNA MER1_type -323 2539 2349 2015 124 3 0 chr20 27187939 27188237 -39479768 + AluSg SINE Alu 1 299 -11 2400 237 95 55 chr20 27188237 27188580 -39479425 - Charlie2b DNA MER1_type -513 2349 2021 1878 152 0 0 chr20 27188580 27188882 -39479123 - AluJb SINE Alu -10 302 1 2400 237 95 55 chr20 27188882 27189612 -39478393 - Charlie2b DNA MER1_type -841 2021 1155 1198 125 0 0 chr20 27189678 27189854 -39478151 - AluSg/x SINE Alu -5 305 130 420 264 0 23 chr20 27189900 27190029 -39477976 - Charlie2b DNA MER1_type -1762 1020 895 242 194 58 58 chr20 27190206 27190245 -39477760 + LTR16A1 LTR ERVL 22 60 -397 369 0 0 0 chr20 27190245 27190286 -39477719 + (CA)n Simple_repeat Simple_repeat 1 41 0 242 194 58 58 chr20 27190286 27190349 -39477656 + LTR16A1 LTR ERVL 59 124 -333 385 183 200 0 chr20 27190480 27190600 -39477405 + LTR16A1 LTR ERVL 314 457 0 323 159 16 0 chr20 27190650 27190713 -39477292 + L1ME1 LINE L1 6098 6161 -5 359 317 81 38 chr20 27191710 27191896 -39476109 + L1ME LINE L1 5631 5824 -297 282 316 123 42 chr20 27191901 27192325 -39475680 + HAL1 LINE L1 6 463 -2044 574 235 0 8 chr20 27192561 27193049 -39474956 + (CA)n Simple_repeat Simple_repeat 1 483 0 2584 236 100 71 chr20 27193067 27194478 -39473527 + HAL1 LINE L1 762 2213 -294 759 287 190 19 chr20 27194643 27195012 -39472993 - LTR16C LTR ERVL -11 480 49 542 231 153 100 chr20 27195537 27195995 -39472010 + L1MEd LINE L1 417 898 -5221 833 168 7 0 chr20 27196017 27196154 -39471851 - AluJo SINE Alu -174 138 1 531 302 82 15 chr20 27196191 27196519 -39471486 + L1MEd LINE L1 904 1253 -4866 512 246 80 11 chr20 27196530 27196717 -39471288 + HAL1 LINE L1 1424 1623 -884 4075 199 36 30 chr20 27196779 27196874 -39471131 + L1M3 LINE L1 4238 4331 -1849 1344 172 90 11 chr20 27196874 27197141 -39470864 + AluJb SINE Alu 4 291 -21 4075 199 36 30 chr20 27197141 27198397 -39469608 + L1M3 LINE L1 4331 5597 -583 22044 148 25 16 chr20 27198397 27198822 -39469183 + ERVL LTR ERVL 1926 2346 -3418 1684 167 10 10 chr20 27198822 27199121 -39468884 + AluJo SINE Alu 1 299 -13 22044 148 25 16 chr20 27199121 27202286 -39465719 + ERVL LTR ERVL 2346 5548 -216 1348 181 104 29 chr20 27202337 27202646 -39465359 - MLT1A1 LTR MaLR -33 332 1 760 152 171 25 chr20 27202668 27202826 -39465179 - MER21B LTR ERV1 -682 181 1 292 86 86 17 chr20 27202826 27202884 -39465121 + L1MB7 LINE L1 6117 6178 -6 485 309 40 24 chr20 27203933 27204151 -39463854 + MIR SINE MIR 4 223 -39 340 298 34 34 chr20 27204873 27205051 -39462954 + LTR16C LTR ERVL 244 421 -70 290 223 96 11 chr20 27205463 27205557 -39462448 - LTR16A1 LTR ERVL -9 448 347 1892 171 30 38 chr20 27205813 27206153 -39461852 - MLT1A1 LTR MaLR 0 365 27 1912 244 102 4 chr20 27206153 27206645 -39461360 - MER87 LTR ERV1 0 541 2 1892 171 30 38 chr20 27206645 27206672 -39461333 - MLT1A1 LTR MaLR -338 27 1 209 319 36 48 chr20 27207361 27207527 -39460478 + L2 LINE L2 2141 2304 -1010 294 310 70 0 chr20 27207954 27208083 -39459922 + L2 LINE L2 2957 3094 -178 416 321 101 6 chr20 27208177 27208345 -39459660 + MIR SINE MIR 68 251 -11 199 179 0 26 chr20 27209477 27209516 -39458489 + L3 LINE CR1 1528 1565 -12 184 121 30 0 chr20 27209487 27209520 -39458485 + MIR3 SINE MIR 163 196 -12 * 1726 234 116 4 chr20 27210311 27210428 -39457577 - MLT1F LTR MaLR -6 536 434 2098 160 23 28 chr20 27210428 27210822 -39457183 + MSTD LTR MaLR 1 392 -4 1726 234 116 4 chr20 27210822 27211186 -39456819 - MLT1F LTR MaLR -108 434 1 453 267 87 38 chr20 27211620 27211882 -39456123 - L1MC4a LINE L1 -297 5824 5656 276 330 28 23 chr20 27211891 27212067 -39455938 - L1M4 LINE L1 -3310 2836 2660 761 270 83 0 chr20 27212232 27212436 -39455569 - MIR SINE MIR -8 254 34 809 196 169 89 chr20 27212487 27212595 -39455410 - HsTC2 DNA Tc2 -44 1854 1756 1789 122 3 31 chr20 27212595 27212881 -39455124 - AluJb SINE Alu -22 290 13 809 196 169 89 chr20 27212881 27213175 -39454830 - HsTC2 DNA Tc2 -142 1756 1244 926 304 182 16 chr20 27214943 27215459 -39452546 - L1ME3A LINE L1 -9 6161 5560 197 136 0 23 chr20 27215896 27215940 -39452065 + (TC)n Simple_repeat Simple_repeat 2 44 0 337 252 19 39 chr20 27215977 27216080 -39451925 - MIR SINE MIR -82 180 80 356 201 149 15 chr20 27217776 27217910 -39450095 - L1ME4a LINE L1 -2 6119 5968 303 212 30 10 chr20 27218025 27218124 -39449881 + L1ME4a LINE L1 6002 6102 -19 275 265 0 0 chr20 27218144 27218212 -39449793 - L1ME4a LINE L1 -289 5832 5765 594 236 112 39 chr20 27218234 27218412 -39449593 + MER69 DNA AcHobo 62 252 -974 584 262 42 143 chr20 27218894 27219326 -39448679 + HAL1b LINE L1 75 462 -886 1471 182 52 12 chr20 27219937 27220267 -39447738 + L1MD3 LINE L1 7653 7995 0 470 295 110 17 chr20 27221229 27221575 -39446430 + LTR16C LTR ERVL 104 481 -10 402 223 74 27 chr20 27223170 27223334 -39444671 + MIR SINE MIR 1 171 -62 1642 162 7 7 chr20 27223582 27223872 -39444133 + AluJo SINE Alu 2 291 -21 2360 78 7 3 chr20 27225022 27225330 -39442675 + AluSx SINE Alu 1 309 -3 1510 157 86 7 chr20 27225473 27225753 -39442252 + AluSq SINE Alu 1 302 -11 2140 181 63 88 chr20 27225902 27226583 -39441422 - MER4A LTR ERV1 0 664 1 2379 87 0 0 chr20 27227003 27227312 -39440693 - AluY SINE Alu -2 309 1 1963 215 107 14 chr20 27227614 27228182 -39439823 + L1MC4 LINE L1 7199 7819 -223 6684 211 54 31 chr20 27228190 27228734 -39439271 - L1MB7 LINE L1 -9 6175 5645 1572 188 10 10 chr20 27228734 27229042 -39438963 - AluJo SINE Alu -4 308 1 6684 211 54 31 chr20 27229042 27229131 -39438874 - L1MB7 LINE L1 -539 5645 5560 2024 138 6 6 chr20 27229131 27229443 -39438562 - AluSx SINE Alu 0 312 1 6684 211 54 31 chr20 27229443 27230546 -39437459 - L1MB7 LINE L1 -624 5560 4485 2396 3 79 10 chr20 27230546 27230836 -39437169 - AluY SINE Alu -1 310 1 6684 211 54 31 chr20 27230836 27230856 -39437149 - L1MB7 LINE L1 -1699 4485 4467 1518 163 37 0 chr20 27230856 27231126 -39436879 - AluJo SINE Alu -30 282 3 6684 211 54 31 chr20 27231126 27231499 -39436506 - L1MB7 LINE L1 -1717 4467 4104 1841 48 4 0 chr20 27231499 27231728 -39436277 - L1PA4 LINE L1 0 6155 5926 6684 211 54 31 chr20 27231728 27232000 -39436005 - L1MB7 LINE L1 -2080 4104 3840 1376 190 68 60 chr20 27232000 27232385 -39435620 + MLT1B LTR MaLR 1 388 -2 6684 211 54 31 chr20 27232385 27232544 -39435461 - L1MB7 LINE L1 -2344 3840 3566 844 164 26 42 chr20 27233183 27233372 -39434633 - AluJo SINE Alu -126 186 1 218 176 11 66 chr20 27233826 27233917 -39434088 + (ATAAG)n Simple_repeat Simple_repeat 3 88 0 2585 177 10 73 chr20 27236341 27236510 -39431495 - L1MA10 LINE L1 0 6334 6156 396 0 0 0 chr20 27236510 27236554 -39431451 + (TTA)n Simple_repeat Simple_repeat 2 45 0 1813 143 7 0 chr20 27236554 27236834 -39431171 - AluSx SINE Alu -30 282 1 2585 177 10 73 chr20 27236834 27237105 -39430900 - L1MA10 LINE L1 -177 6157 5939 1535 191 20 92 chr20 27237105 27237498 -39430507 + MLT1A1 LTR MaLR 1 365 0 2585 177 10 73 chr20 27237498 27237659 -39430346 - L1MA10 LINE L1 -395 5939 5769 3744 104 32 0 chr20 27237664 27238194 -39429811 - MER41B LTR ERV1 -88 547 1 1299 124 0 0 chr20 27238194 27238371 -39429634 - MER41B-int LTR ERV1 0 5946 5770 * 7512 99 12 20 chr20 27238369 27238754 -39429251 - MER41B-int LTR ERV1 -544 5402 5015 2052 127 0 0 chr20 27238754 27239045 -39428960 + AluSg SINE Alu 1 291 -19 7512 99 12 20 chr20 27239045 27239772 -39428233 - MER41B-int LTR ERV1 -931 5015 4299 32088 107 12 61 chr20 27239780 27244334 -39423671 + L1PA7 LINE L1 10 4147 -2007 2207 109 3 0 chr20 27244334 27244645 -39423360 + AluSp SINE Alu 2 313 0 32088 107 12 61 chr20 27244645 27246550 -39421455 + L1PA7 LINE L1 4147 6143 -11 3313 135 54 30 chr20 27246560 27247204 -39420801 - MER41B-int LTR ERV1 -1510 3505 2846 5032 114 31 6 chr20 27247204 27248000 -39420005 - MER57-int LTR ERV1 -3941 3596 2781 837 113 42 14 chr20 27248014 27248156 -39419849 - MER57-int LTR ERV1 -4174 2089 1944 * 3663 118 31 17 chr20 27248135 27248713 -39419292 - MER57-int LTR ERV1 -4171 1775 1190 614 62 0 0 chr20 27248708 27248788 -39419217 - MER57-int LTR ERV1 -5144 802 723 * 1503 244 83 5 chr20 27248809 27249218 -39418787 - L1M4b LINE L1 -6416 443 3 316 263 58 66 chr20 27249309 27249446 -39418559 - MIR SINE MIR -63 199 64 234 0 0 0 chr20 27249506 27249532 -39418473 + (TG)n Simple_repeat Simple_repeat 2 27 0 1842 155 23 23 chr20 27249648 27249957 -39418048 + AluJo SINE Alu 1 309 -3 247 258 16 0 chr20 27250169 27250231 -39417774 + MIR3 SINE MIR 143 205 -3 273 190 17 0 chr20 27250374 27250432 -39417573 + LTR16C LTR ERVL 195 253 -238 481 244 111 15 chr20 27251042 27251113 -39416892 + MIR SINE MIR 19 82 -180 1901 160 6 26 chr20 27251113 27251426 -39416579 - AluJb SINE Alu -5 307 1 481 244 111 15 chr20 27251426 27251489 -39416516 + MIR SINE MIR 82 166 -96 1591 217 78 80 chr20 27251500 27251998 -39416007 + L1MC4 LINE L1 7317 7813 -229 218 310 62 55 chr20 27252211 27252356 -39415649 - L2 LINE L2 -5 3267 3122 296 184 11 69 chr20 27252564 27252651 -39415354 + AluSp/q SINE Alu 222 303 0 31 0 0 0 chr20 27252653 27252684 -39415321 + AT_rich Low_complexity Low_complexity 1 31 0 260 197 49 16 chr20 27252881 27252942 -39415063 + MIR3 SINE MIR 143 205 -3 242 279 15 0 chr20 27253088 27253156 -39414849 + LTR16C LTR ERVL 185 253 -238 288 127 365 0 chr20 27253267 27253330 -39414675 - AluJ SINE Alu -49 253 168 626 167 19 0 chr20 27253331 27253439 -39414566 - AluJ SINE Alu -201 111 2 22 56 0 0 chr20 27253803 27253839 -39414166 + AT_rich Low_complexity Low_complexity 1 36 0 259 281 146 0 chr20 27253894 27253983 -39414022 - L2 LINE L2 -10 3303 3202 353 311 80 34 chr20 27254188 27254426 -39413579 + L1M4 LINE L1 2615 2863 -3283 729 123 0 0 chr20 27254871 27254985 -39413020 + L1MA4 LINE L1 6175 6288 -12 37044 84 8 8 chr20 27254986 27261123 -39406882 - L1PA6 LINE L1 -6 6148 11 331 304 18 12 chr20 27261136 27261304 -39406701 + L1M4 LINE L1 2869 3037 -3109 584 243 142 9 chr20 27261715 27261933 -39406072 + LTR65 LTR ERV1 278 524 -145 603 275 174 28 chr20 27263070 27263791 -39404214 + L1M4 LINE L1 3028 3895 -2251 2335 94 3 7 chr20 27263791 27264089 -39403916 + AluSx SINE Alu 1 297 -15 603 275 174 28 chr20 27264089 27264221 -39403784 + L1M4 LINE L1 3895 4006 -2140 704 221 115 1 chr20 27264734 27265011 -39402994 - LTR16C LTR ERVL 0 491 150 295 306 24 0 chr20 27265507 27265592 -39402413 - LTR16C LTR ERVL 0 491 405 180 0 0 0 chr20 27265593 27265613 -39402392 + (GA)n Simple_repeat Simple_repeat 1 20 0 2649 178 40 2 chr20 27265762 27266217 -39401788 - MER70A LTR ERVL 0 472 1 405 230 59 89 chr20 27266419 27266554 -39401451 - L2 LINE L2 -28 3285 3155 2214 189 35 115 chr20 27266617 27266837 -39401168 + LTR8 LTR ERV1 31 267 -424 2507 86 0 0 chr20 27266837 27267141 -39400864 + AluSq SINE Alu 1 304 -9 2214 189 35 115 chr20 27267141 27267460 -39400545 + LTR8 LTR ERV1 267 500 -191 1925 117 8 4 chr20 27267460 27267724 -39400281 + AluSx SINE Alu 27 291 -21 2214 189 35 115 chr20 27267724 27267902 -39400103 + LTR8 LTR ERV1 500 691 0 351 257 186 44 chr20 27267904 27268087 -39399918 - L2 LINE L2 -174 3139 2931 623 279 60 40 chr20 27268223 27268570 -39399435 + L1MC/D LINE L1 5401 5754 -2054 2046 120 34 0 chr20 27269060 27269351 -39398654 + AluSx SINE Alu 1 301 -11 22 35 0 0 chr20 27269898 27269927 -39398078 + GC_rich Low_complexity Low_complexity 1 29 0 28 29 0 0 chr20 27270010 27270045 -39397960 + GC_rich Low_complexity Low_complexity 1 35 0 2186 113 3 23 chr20 27272332 27272632 -39395373 + AluSx SINE Alu 1 294 -18 213 335 65 20 chr20 27273007 27273207 -39394798 + L2 LINE L2 2305 2513 -801 3385 197 64 14 chr20 27273625 27274638 -39393367 - L1MB3 LINE L1 -7 6412 5314 5354 216 100 31 chr20 27274639 27275824 -39392181 - L1MB3 LINE L1 -2702 3680 2579 2142 136 111 40 chr20 27275824 27275896 -39392109 - Tigger2a DNA MER2_type -2274 434 369 1490 139 0 9 chr20 27275896 27276119 -39391886 - AluJo SINE Alu -54 258 38 2142 136 111 40 chr20 27276119 27276451 -39391554 - Tigger2a DNA MER2_type -2339 369 1 5354 216 100 31 chr20 27276451 27278047 -39389958 - L1MB3 LINE L1 -3803 2579 777 338 313 39 16 chr20 27278066 27278194 -39389811 - L1MB3 LINE L1 -5719 665 535 21 0 0 0 chr20 27278607 27278628 -39389377 + AT_rich Low_complexity Low_complexity 1 21 0 335 321 130 13 chr20 27279266 27279658 -39388347 - L2 LINE L2 -60 3253 2816 322 319 104 14 chr20 27280937 27281081 -39386924 + MIR SINE MIR 35 191 -71 301 274 148 7 chr20 27281603 27281738 -39386267 - MER5A DNA MER1_type -22 167 14 1006 119 0 0 chr20 27282457 27282591 -39385414 + AluSp/q SINE Alu 156 289 -24 24 0 0 0 chr20 27282609 27282633 -39385372 + AT_rich Low_complexity Low_complexity 1 24 0 1375 121 5 0 chr20 27283043 27283234 -39384771 - AluSg/x SINE Alu 0 312 118 2508 70 0 10 chr20 27283234 27283548 -39384457 - AluY SINE Alu 0 311 1 830 155 8 0 chr20 27283576 27283705 -39384300 + FLAM_A SINE Alu 1 130 -3 60 15 0 0 chr20 27283705 27283772 -39384233 + AT_rich Low_complexity Low_complexity 1 67 0 1673 174 52 14 chr20 27284502 27284789 -39383216 + AluJb SINE Alu 1 298 -14 2206 108 0 14 chr20 27284798 27285093 -39382912 + AluSx SINE Alu 1 291 -21 252 226 60 68 chr20 27285762 27285895 -39382110 - L1MC/D LINE L1 -1976 5832 5701 1490 212 15 4 chr20 27285953 27286227 -39381778 - AluJb SINE Alu -18 294 18 1609 174 7 30 chr20 27286711 27286835 -39381170 + AluJo SINE Alu 1 126 -186 2466 88 0 0 chr20 27286835 27287143 -39380862 - AluY SINE Alu -3 308 1 1609 174 7 30 chr20 27287143 27287322 -39380683 + AluJo SINE Alu 126 297 -15 1966 168 0 0 chr20 27287806 27288104 -39379901 + AluJo SINE Alu 1 298 -14 732 74 11 0 chr20 27288837 27288932 -39379073 + HY3 scRNA scRNA 2 97 -4 236 148 0 56 chr20 27291847 27291901 -39376104 + (TCC)n Simple_repeat Simple_repeat 3 53 0 215 135 0 77 chr20 27291936 27291988 -39376017 + (TCC)n Simple_repeat Simple_repeat 3 50 0 193 54 0 54 chr20 27292025 27292062 -39375943 + (TCC)n Simple_repeat Simple_repeat 3 37 0 193 54 0 54 chr20 27292111 27292148 -39375857 + (TCC)n Simple_repeat Simple_repeat 3 37 0 225 137 0 59 chr20 27292190 27292241 -39375764 + (TCC)n Simple_repeat Simple_repeat 3 50 0 218 304 89 0 chr20 27292437 27292516 -39375489 + L2 LINE L2 3183 3268 -4 1894 159 3 13 chr20 27293018 27293319 -39374686 - AluSx SINE Alu -14 298 1 199 260 188 10 chr20 27295044 27295140 -39372865 + MIR SINE MIR 117 229 -33 237 341 173 8 chr20 27296117 27296372 -39371633 - L2 LINE L2 -189 3124 2828 182 272 152 11 chr20 27296517 27296609 -39371396 + MIR SINE MIR 48 152 -56 251 229 202 27 chr20 27302013 27302201 -39365804 - L1MC/D LINE L1 -2333 5475 5255 1993 150 7 0 chr20 27302389 27302682 -39365323 - AluSx SINE Alu -13 299 5 265 306 62 14 chr20 27302689 27302780 -39365225 - MARNA DNA Mariner -197 389 287 1992 114 13 45 chr20 27302780 27303088 -39364917 + AluSq SINE Alu 1 298 -15 265 306 62 14 chr20 27303088 27303140 -39364865 - MARNA DNA Mariner -299 287 239 2282 82 0 24 chr20 27303145 27303438 -39364567 + AluSg SINE Alu 1 286 -24 300 253 159 44 chr20 27303586 27303768 -39364237 + L3 LINE CR1 1159 1361 -216 2285 97 0 0 chr20 27304799 27305089 -39362916 + AluSg SINE Alu 1 290 -20 2017 152 14 0 chr20 27305104 27305393 -39362612 + AluSg SINE Alu 3 295 -15 889 206 6 0 chr20 27305402 27305582 -39362423 - L1ME LINE L1 -401 5763 5583 478 48 0 0 chr20 27305589 27305651 -39362354 + AluSc SINE Alu 6 67 -243 1267 152 91 117 chr20 27305651 27306111 -39361894 + LTR7 LTR ERV1 1 448 -2 1953 81 0 0 chr20 27306113 27306347 -39361658 + AluSc SINE Alu 63 296 -13 371 203 0 0 chr20 27306348 27306417 -39361588 - L1ME LINE L1 -583 5583 5515 2244 114 0 16 chr20 27306531 27306838 -39361167 + AluSg SINE Alu 1 302 -8 1157 97 26 0 chr20 27306838 27306993 -39361012 + AluSg/x SINE Alu 134 292 -20 1190 207 113 12 chr20 27306994 27307323 -39360682 + L1MB7 LINE L1 5823 6184 0 2361 225 37 77 chr20 27307943 27307976 -39360029 - L1ME2 LINE L1 -2 6162 6129 7860 80 6 2 chr20 27307976 27308941 -39359064 - LTR5 LTR ERVK 0 969 1 2361 225 37 77 chr20 27308941 27309508 -39358497 - L1ME2 LINE L1 -35 6129 5541 2429 68 0 3 chr20 27309508 27309803 -39358202 + AluY SINE Alu 1 294 -17 2361 225 37 77 chr20 27309803 27309953 -39358052 - L1ME2 LINE L1 -623 5541 5441 716 179 8 0 chr20 27309953 27310076 -39357929 - FLAM_A SINE Alu -9 124 1 2361 225 37 77 chr20 27310076 27310106 -39357899 - L1ME2 LINE L1 -723 5441 5411 1290 206 71 0 chr20 27310311 27310593 -39357412 - MER58B DNA MER1_type -7 334 33 1904 107 0 4 chr20 27311330 27311574 -39356431 + AluSq SINE Alu 1 243 -70 1064 245 124 0 chr20 27312037 27312360 -39355645 - L1ME3A LINE L1 -260 5910 5548 643 224 18 174 chr20 27312752 27313091 -39354914 + MLT1A1 LTR MaLR 7 292 -73 2367 133 53 17 chr20 27313093 27313506 -39354499 - MSTA LTR MaLR 0 428 1 2344 86 41 0 chr20 27314540 27314831 -39353174 + AluSq SINE Alu 1 303 -10 520 278 37 16 chr20 27315048 27315257 -39352748 - L1MC4 LINE L1 -426 7462 7170 313 208 54 107 chr20 27315287 27315384 -39352621 - L1MC4 LINE L1 -895 7147 7059 8104 68 3 4 chr20 27315384 27316354 -39351651 + LTR5 LTR ERVK 1 969 0 313 208 54 107 chr20 27316354 27316405 -39351600 - L1MC4 LINE L1 -983 7059 7007 1955 171 0 3 chr20 27316885 27317189 -39350816 + AluJb SINE Alu 1 303 -9 1182 233 81 83 chr20 27317558 27317811 -39350194 - MER34C LTR ERV1 -6 579 327 1624 201 99 8 chr20 27317811 27318174 -39349831 - MSTD LTR MaLR 0 396 1 1182 233 81 83 chr20 27318174 27318452 -39349553 - MER34C LTR ERV1 -258 327 49 181 176 0 0 chr20 27318496 27318530 -39349475 + L2 LINE L2 2923 2956 -358 2011 115 54 0 chr20 27318545 27318824 -39349181 - AluSx SINE Alu -18 294 1 2249 122 3 0 chr20 27318943 27319254 -39348751 + AluSx SINE Alu 1 312 0 2381 147 40 11 chr20 27319486 27319957 -39348048 - MER31A LTR ERV1 0 485 1 250 202 0 77 chr20 27320136 27320240 -39347765 - L1ME4a LINE L1 -38 6083 5988 299 193 12 60 chr20 27320246 27320329 -39347676 - MER3 DNA MER1_type 0 209 131 410 250 132 7 chr20 27320498 27320650 -39347355 + MIR SINE MIR 34 204 -58 254 311 68 0 chr20 27320782 27320885 -39347120 - L1ME LINE L1 -462 5659 5550 589 267 115 16 chr20 27321181 27321711 -39346294 - LTR65 LTR ERV1 -6 663 14 222 210 0 49 chr20 27322119 27322200 -39345805 + (CCCCG)n Simple_repeat Simple_repeat 2 78 0 2305 87 0 7 chr20 27323989 27324287 -39343718 - AluSg SINE Alu -14 296 1 310 285 14 48 chr20 27325441 27325583 -39342422 + MIR3 SINE MIR 58 194 -14 1910 207 99 94 chr20 27326526 27327260 -39340745 - MER21B LTR ERV1 -125 738 1 738 181 80 27 chr20 27327292 27327480 -39340525 + MLT2D LTR ERVL 217 414 0 1862 109 69 0 chr20 27327508 27327755 -39340250 + AluSq SINE Alu 1 264 -49 327 49 0 0 chr20 27327762 27327803 -39340202 + (TAAAA)n Simple_repeat Simple_repeat 3 43 0 842 241 39 73 chr20 27327835 27328011 -39339994 - L1MD3 LINE L1 -12 8028 7876 1649 111 0 0 chr20 27328011 27328227 -39339778 + AluSg/x SINE Alu 84 299 -13 842 241 39 73 chr20 27328227 27328391 -39339614 - L1MD3 LINE L1 -164 7876 7708 23 33 0 0 chr20 27328476 27328506 -39339499 + AT_rich Low_complexity Low_complexity 1 30 0 194 318 129 12 chr20 27328992 27329077 -39338928 + L3 LINE CR1 1480 1574 -3 2324 101 3 0 chr20 27329875 27330171 -39337834 - AluSq SINE Alu -16 297 1 843 113 0 0 chr20 27330549 27330664 -39337341 + AluSg/x SINE Alu 196 310 0 304 200 67 48 chr20 27331145 27331250 -39336755 - MIR3 SINE MIR -95 113 7 749 165 0 8 chr20 27331686 27331813 -39336192 + FLAM_A SINE Alu 1 126 -7 329 272 0 56 chr20 27332450 27332575 -39335430 - MLT1F1 LTR MaLR -447 120 3 373 238 48 0 chr20 27332579 27332663 -39335342 - L1MD3 LINE L1 -719 7276 7189 321 301 10 10 chr20 27332987 27333090 -39334915 - MIR SINE MIR -148 114 12 33838 75 46 1 chr20 27334639 27339378 -39328627 + L1P LINE L1 3 4953 -1193 1757 185 17 53 chr20 27339377 27339731 -39328274 - L1M3 LINE L1 -538 5645 5306 * 2507 80 0 3 chr20 27339731 27340033 -39327972 - AluY SINE Alu -10 301 1 1757 185 17 53 chr20 27340033 27340156 -39327849 - L1M3 LINE L1 -877 5306 5180 866 127 0 0 chr20 27340171 27340289 -39327716 - AluSq/x SINE Alu -195 118 1 379 176 11 0 chr20 27340289 27340380 -39327625 - L1M3 LINE L1 -959 5187 5096 * 2067 182 124 15 chr20 27340375 27341572 -39326433 + L1MB7 LINE L1 4839 6169 -15 2005 153 10 10 chr20 27341662 27341969 -39326036 - AluJb SINE Alu -5 307 1 622 173 18 50 chr20 27342473 27342693 -39325312 + Charlie1 DNA MER1_type 2493 2705 -56 2367 82 3 13 chr20 27344300 27344640 -39323365 - AluY SINE Alu 0 311 1 1873 126 15 0 chr20 27344671 27344933 -39323072 - AluJo SINE Alu -46 266 1 856 161 21 54 chr20 27347966 27348152 -39319853 - FRAM SINE Alu 0 176 1 941 241 75 4 chr20 27348213 27348478 -39319527 - L1MB7 LINE L1 -72 6112 5829 758 186 0 0 chr20 27353724 27353842 -39314163 + FLAM_C SINE Alu 9 126 -17 1612 138 36 4 chr20 27358611 27358864 -39309141 - AluJb SINE Alu -51 261 1 215 359 0 0 chr20 27359783 27359861 -39308144 + (TG)n Simple_repeat Simple_repeat 1 78 0 243 313 65 19 chr20 27360028 27360242 -39307763 - HAL1b LINE L1 -743 605 382 225 240 0 0 chr20 27360506 27360556 -39307449 + C-rich Low_complexity Low_complexity 2 51 0 1428 229 3 23 chr20 27361502 27361808 -39306197 + AluJo SINE Alu 1 300 -2 1785 177 0 3 chr20 27361841 27362140 -39305865 + AluJo SINE Alu 6 303 -9 348 299 55 16 chr20 27363365 27363492 -39304513 - L1MC5 LINE L1 -158 7803 7672 1934 148 10 3 chr20 27363502 27363812 -39304193 + AluJb SINE Alu 1 312 0 319 340 30 0 chr20 27363876 27363976 -39304029 - L1MC4 LINE L1 -149 7893 7791 301 174 84 42 chr20 27365016 27365183 -39302822 + (CCCTG)n Simple_repeat Simple_repeat 1 174 0 272 220 0 0 chr20 27367266 27367325 -39300680 + G-rich Low_complexity Low_complexity 1 59 0 494 295 30 0 chr20 27367418 27367584 -39300421 - L1MD3 LINE L1 -180 7815 7645 207 0 0 0 chr20 27368460 27368483 -39299522 + (GGGA)n Simple_repeat Simple_repeat 1 23 0 383 218 0 0 chr20 27370991 27371069 -39296936 + LTR49-int LTR ERV1 3261 3338 -2993 413 171 31 78 chr20 27371118 27371247 -39296758 + LTR49-int LTR ERV1 3341 3463 -2868 2102 97 38 0 chr20 27372403 27372693 -39295312 - AluSq SINE Alu -12 301 1 1897 127 31 14 chr20 27373259 27373550 -39294455 + AluJo SINE Alu 1 296 -16 250 184 0 0 chr20 27375672 27375721 -39292284 - MIR SINE MIR -144 118 70 187 184 0 0 chr20 27378323 27378361 -39289644 + L2 LINE L2 3138 3175 -97 2159 107 7 7 chr20 27378697 27379005 -39289000 - AluSc SINE Alu -1 308 1 1630 105 151 0 chr20 27379047 27379305 -39288700 - AluSx SINE Alu -15 297 1 21 0 0 0 chr20 27379466 27379487 -39288518 + AT_rich Low_complexity Low_complexity 1 21 0 2323 94 0 3 chr20 27379492 27379799 -39288206 - AluSc SINE Alu -3 306 1 2185 105 3 6 chr20 27380022 27380335 -39287670 + AluSx SINE Alu 1 312 0 1847 157 0 14 chr20 27380516 27380809 -39287196 - AluJb SINE Alu -12 300 12 30 100 0 0 chr20 27381994 27382094 -39285911 + AT_rich Low_complexity Low_complexity 1 100 0 292 110 24 87 chr20 27384790 27384917 -39283088 + (CAGAGA)n Simple_repeat Simple_repeat 6 124 0 1203 233 175 43 chr20 27385238 27385684 -39282321 + MLT1D LTR MaLR 1 505 0 1892 145 0 10 chr20 27385856 27386146 -39281859 - AluSx SINE Alu -25 287 1 1623 177 7 13 chr20 27386190 27386307 -39281698 + AluJb SINE Alu 16 132 -180 10525 40 9 52 chr20 27386307 27387769 -39280236 + SVA Other Other 19 1419 0 1623 177 7 13 chr20 27387769 27387949 -39280056 + AluJb SINE Alu 132 312 0 2169 112 3 0 chr20 27388115 27388411 -39279594 - AluSx SINE Alu -15 297 1 1751 179 3 7 chr20 27388534 27388835 -39279170 + AluJo SINE Alu 1 300 -12 2281 91 3 10 chr20 27390288 27390597 -39277408 - AluSg1 SINE Alu -2 307 1 1490 105 74 39 chr20 27390812 27391069 -39276936 + AluJo SINE Alu 18 283 -29 2088 131 7 0 chr20 27392173 27392479 -39275526 + AluSx SINE Alu 1 308 -4 451 308 57 21 chr20 27393731 27394066 -39273939 + LTR65 LTR ERV1 10 356 -313 530 228 158 0 chr20 27394107 27394278 -39273727 + LTR65 LTR ERV1 472 669 0 180 0 0 0 chr20 27396501 27396521 -39271484 + (TA)n Simple_repeat Simple_repeat 2 21 0 2183 93 0 20 chr20 27396521 27396821 -39271184 - AluSx SINE Alu -16 296 3 2028 149 3 0 chr20 27396852 27397160 -39270845 - AluSx SINE Alu -3 309 1 261 266 0 0 chr20 27397615 27397709 -39270296 + (CA)n Simple_repeat Simple_repeat 2 95 0 1340 172 9 0 chr20 27399139 27399372 -39268633 + AluJb SINE Alu 78 312 0 1332 203 118 55 chr20 27399485 27399924 -39268081 + MLT1C LTR MaLR 1 467 0 2196 110 3 0 chr20 27399927 27400237 -39267768 + AluSx SINE Alu 1 311 -1 315 218 36 0 chr20 27400242 27400352 -39267653 + GA-rich Low_complexity Low_complexity 3 116 0 5888 134 9 22 chr20 27400371 27401324 -39266681 + HUERS-P1 LTR ERV1 5317 6257 -6 2253 97 0 0 chr20 27401326 27401624 -39266381 + AluSg SINE Alu 2 299 -11 3830 102 21 61 chr20 27401633 27402242 -39265763 + LTR8 LTR ERV1 1 585 -106 43058 36 23 1 chr20 27404088 27410109 -39257896 + L1PA3 LINE L1 1 6155 0 306 254 10 129 chr20 27410318 27410511 -39257494 + L1ME4a LINE L1 5930 6099 -22 1796 157 0 13 chr20 27411118 27411431 -39256574 + AluJb SINE Alu 1 309 -3 218 196 0 43 chr20 27411681 27411727 -39256278 - L2 LINE L2 -4 3268 3225 514 250 39 32 chr20 27413123 27413279 -39254726 + L1ME3 LINE L1 6003 6159 -3 1528 175 66 113 chr20 27414182 27414731 -39253274 - Charlie1b DNA MER1_type 0 523 1 1457 209 39 3 chr20 27414811 27415142 -39252863 + L1ME1 LINE L1 5820 6162 -4 559 339 56 5 chr20 27415580 27415775 -39252230 + MIR SINE MIR 6 210 -52 278 167 0 0 chr20 27416151 27416199 -39251806 + L1ME1 LINE L1 5649 5696 -468 380 82 0 4 chr20 27416199 27416262 -39251743 + AluSp/q SINE Alu 249 303 0 958 174 26 0 chr20 27416263 27416453 -39251552 + L1ME1 LINE L1 5691 5885 -281 880 128 0 123 chr20 27416539 27416718 -39251287 + Tigger1 DNA MER2_type 1 157 -2261 1418 179 56 18 chr20 27416730 27417015 -39250990 - AluJo SINE Alu -5 307 12 1107 204 0 14 chr20 27417017 27417233 -39250772 - AluSx SINE Alu -99 213 1 287 64 0 21 chr20 27417233 27417280 -39250725 + Tigger1 DNA MER2_type 2220 2265 -153 5812 181 61 62 chr20 27417281 27417544 -39250461 + L1MC3 LINE L1 3421 3683 -4102 521 222 0 0 chr20 27417544 27417643 -39250362 + FLAM_A SINE Alu 1 99 -43 5812 181 61 62 chr20 27417643 27417661 -39250344 + L1MC3 LINE L1 3683 3700 -4085 1904 122 36 7 chr20 27417661 27417965 -39250040 + AluSq SINE Alu 1 313 0 5812 181 61 62 chr20 27417965 27419225 -39248780 + L1MC3 LINE L1 3700 4960 -2825 2168 107 0 0 chr20 27419225 27419523 -39248482 - AluY SINE Alu -13 298 1 5812 181 61 62 chr20 27419523 27420785 -39247220 + L1MC3 LINE L1 4960 6222 -1563 2223 84 3 3 chr20 27420785 27421082 -39246923 - AluY SINE Alu -14 297 1 5812 181 61 62 chr20 27421082 27421104 -39246901 + L1MC3 LINE L1 6222 7785 0 1031 199 5 23 chr20 27421681 27421897 -39246108 + AluJo SINE Alu 1 212 -100 2147 98 0 3 chr20 27422070 27422367 -39245638 + AluSc SINE Alu 3 298 -11 192 40 0 0 chr20 27422585 27422610 -39245395 + (A)n Simple_repeat Simple_repeat 1 25 0 826 223 0 0 chr20 27422613 27422770 -39245235 + FAM SINE Alu 1 157 -18 2483 52 0 7 chr20 27422942 27423250 -39244755 + AluY SINE Alu 4 309 -2 3869 138 6 16 chr20 27423423 27424070 -39243935 + L1MB4 LINE L1 5540 6180 0 226 255 122 43 chr20 27424183 27424438 -39243567 + L1M4 LINE L1 3923 4197 -1949 2324 128 34 3 chr20 27424450 27424803 -39243202 + THE1B LTR MaLR 1 364 0 428 125 97 0 chr20 27424820 27424892 -39243113 + MER72 LTR ERV1 2 80 -642 459 0 0 0 chr20 27425098 27425149 -39242856 + (CA)n Simple_repeat Simple_repeat 1 51 0 272 320 87 0 chr20 27425353 27425456 -39242549 + L2 LINE L2 3182 3293 -20 312 327 28 9 chr20 27425629 27425736 -39242269 - MER5B DNA MER1_type -14 164 56 1692 108 62 0 chr20 27425779 27426067 -39241938 + AluSp SINE Alu 7 310 0 2103 128 0 0 chr20 27426124 27426430 -39241575 - AluSx SINE Alu -6 306 1 2203 98 0 3 chr20 27426430 27426727 -39241278 - AluSx SINE Alu -15 297 2 432 182 20 13 chr20 27426900 27427148 -39240857 + AluJo SINE Alu 1 282 -30 24 67 0 0 chr20 27428878 27428923 -39239082 + AT_rich Low_complexity Low_complexity 1 45 0 2271 86 7 0 chr20 27429691 27429995 -39238010 - AluSc SINE Alu -3 306 1 553 217 17 9 chr20 27430999 27431114 -39236891 + FLAM_C SINE Alu 7 122 -21 1856 160 0 0 chr20 27431867 27432154 -39235851 + AluJb SINE Alu 1 287 -25 436 252 139 54 chr20 27432184 27432442 -39235563 + L1MC/D LINE L1 5499 5778 -2030 22 0 0 0 chr20 27433238 27433260 -39234745 + AT_rich Low_complexity Low_complexity 1 22 0 2586 26 0 10 chr20 27433278 27433584 -39234421 + AluY SINE Alu 1 303 -8 1811 148 0 4 chr20 27433732 27434009 -39233996 - AluSx SINE Alu -36 276 1 2437 77 0 3 chr20 27434367 27434678 -39233327 - AluSg SINE Alu 0 310 1 690 264 287 10 chr20 27434703 27435188 -39232817 + HAL1 LINE L1 8 626 -1881 542 127 0 0 chr20 27435536 27435615 -39232390 - AluY SINE Alu -14 297 219 310 309 36 58 chr20 27435667 27435806 -39232199 - L1 LINE L1 -1725 4421 4286 2325 80 0 0 chr20 27435812 27436123 -39231882 + AluY SINE Alu 1 311 0 1978 117 7 17 chr20 27436133 27436431 -39231574 + AluSx SINE Alu 3 297 -15 1978 101 22 0 chr20 27436431 27436709 -39231296 + AluSg1 SINE Alu 1 284 -25 387 98 0 0 chr20 27436717 27436778 -39231227 + (GGGGA)n Simple_repeat Simple_repeat 5 65 0 2213 94 7 0 chr20 27436803 27437111 -39230894 - AluSp SINE Alu -3 310 1 258 222 0 0 chr20 27437288 27437333 -39230672 - L2 LINE L2 -1 3312 3268 2136 103 7 0 chr20 27437354 27437655 -39230350 - AluSc SINE Alu -6 303 1 2037 128 7 0 chr20 27437723 27438027 -39229978 + AluSq SINE Alu 1 306 -7 1748 139 145 36 chr20 27438394 27438781 -39229224 - MSTB1 LTR MaLR 0 432 4 256 291 19 39 chr20 27439095 27439198 -39228807 + MLT1J LTR MaLR 75 175 -336 1245 231 216 39 chr20 27439383 27439907 -39228098 - L1MC4a LINE L1 -1761 6047 5379 1549 173 34 0 chr20 27439907 27440173 -39227832 + AluJb SINE Alu 3 277 -35 1245 231 216 39 chr20 27440173 27440314 -39227691 - L1MC4a LINE L1 -2429 5379 5264 2082 97 35 0 chr20 27440410 27440700 -39227305 - AluSp SINE Alu -9 304 5 254 345 10 31 chr20 27440815 27441009 -39226996 - L1MC4a LINE L1 -1162 4984 4795 3583 158 48 14 chr20 27441550 27442216 -39225789 - L1MB3 LINE L1 -20 6163 5475 1401 208 31 0 chr20 27442986 27443274 -39224731 + AluJo SINE Alu 4 300 -12 1028 153 61 5 chr20 27443275 27443471 -39224534 - L1MB3 LINE L1 -710 5470 5264 445 295 43 82 chr20 27443471 27443752 -39224253 - MLT1I LTR MaLR -14 395 126 573 147 0 176 chr20 27443918 27444088 -39223917 + FLAM_C SINE Alu 2 141 -2 705 244 62 21 chr20 27444771 27444964 -39223041 + MIR SINE MIR 62 262 0 847 128 15 15 chr20 27444989 27445122 -39222883 - FLAM_C SINE Alu 0 133 1 515 183 0 11 chr20 27445893 27445986 -39222019 - AluJ/FLAM SINE Alu -218 94 3 336 215 47 37 chr20 27445990 27446097 -39221908 - L1MEc LINE L1 -3064 3151 3044 772 252 0 0 chr20 27446144 27446303 -39221702 - FRAM SINE Alu -6 160 2 343 170 6 214 chr20 27446306 27446354 -39221651 - L1MEc LINE L1 -4682 1714 1658 1298 163 107 69 chr20 27446354 27446643 -39221362 - AluJb SINE Alu -2 300 1 343 170 6 214 chr20 27446643 27446776 -39221229 - L1MEc LINE L1 -4738 1658 1571 2903 183 58 16 chr20 27446776 27447345 -39220660 + MER7C DNA MER2_type 1 593 -9 2028 137 0 0 chr20 27447403 27447709 -39220296 + AluSx SINE Alu 1 306 -6 582 324 37 17 chr20 27447765 27448064 -39219941 - L1MEc LINE L1 -4893 1503 1199 1304 181 32 28 chr20 27448065 27448347 -39219658 - AluJb SINE Alu -12 300 18 554 247 84 59 chr20 27448465 27448632 -39219373 - L1MEc LINE L1 -5284 1112 934 2225 78 3 23 chr20 27448632 27448938 -39219067 - AluSp SINE Alu -13 300 1 554 247 84 59 chr20 27448938 27449057 -39218948 - L1MEc LINE L1 -5462 934 819 2216 180 16 0 chr20 27449057 27449441 -39218564 + MLT1B LTR MaLR 1 390 0 1369 238 112 5 chr20 27449517 27449891 -39218114 - L1MEc LINE L1 -5889 507 94 2208 70 3 3 chr20 27449979 27450285 -39217720 + AluY SINE Alu 1 306 0 488 244 52 66 chr20 27450741 27450954 -39217051 + L2 LINE L2 3103 3312 -1 1745 146 61 20 chr20 27451489 27451832 -39216173 - MSTC LTR MaLR -2 426 70 2193 97 0 3 chr20 27451834 27452134 -39215871 - AluSc SINE Alu -10 299 1 282 106 0 167 chr20 27452163 27452229 -39215776 - MSTC LTR MaLR -337 59 5 298 253 187 0 chr20 27452439 27452530 -39215475 + L2 LINE L2 3160 3267 -5 180 0 0 0 chr20 27452836 27452856 -39215149 + (T)n Simple_repeat Simple_repeat 1 20 0 634 302 117 3 chr20 27453483 27453774 -39214231 + L2 LINE L2 1347 1670 -1644 1021 188 160 4 chr20 27453861 27454111 -39213894 - AluJb SINE Alu -6 306 18 335 227 0 59 chr20 27454230 27454349 -39213656 - L1MEc LINE L1 -5285 1111 1000 516 93 0 0 chr20 27454398 27454473 -39213532 - AluSp/q SINE Alu -11 302 228 22 0 0 0 chr20 27454552 27454574 -39213431 + AT_rich Low_complexity Low_complexity 1 22 0 442 244 446 15 chr20 27454604 27455322 -39212683 + L2 LINE L2 1729 2755 -559 1996 108 0 58 chr20 27455765 27456090 -39211915 - AluSx SINE Alu 0 312 7 266 304 193 0 chr20 27456151 27456286 -39211719 - MIR SINE MIR -12 250 90 205 250 0 0 chr20 27456665 27456705 -39211300 + polypurine Low_complexity Low_complexity 1 40 0 2356 66 0 44 chr20 27457677 27457812 -39210193 + AluSg SINE Alu 1 140 -170 2256 100 0 3 chr20 27457812 27458122 -39209883 + AluSg SINE Alu 1 309 -1 2356 66 0 44 chr20 27458122 27458306 -39209699 + AluSg SINE Alu 140 306 -4 180 77 0 0 chr20 27458541 27458567 -39209438 + (CA)n Simple_repeat Simple_repeat 2 27 0 1735 181 3 0 chr20 27458601 27458911 -39209094 + AluJb SINE Alu 1 311 -1 360 331 0 0 chr20 27458922 27459052 -39208953 + Charlie8 DNA MER1_type 134 263 -2154 204 40 0 0 chr20 27459092 27459117 -39208888 + (TG)n Simple_repeat Simple_repeat 2 26 0 2189 93 23 0 chr20 27459194 27459494 -39208511 + AluSp SINE Alu 1 307 -6 603 197 17 8 chr20 27459710 27459827 -39208178 + FLAM_C SINE Alu 9 126 -17 234 0 0 0 chr20 27459828 27459854 -39208151 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 21 36 0 0 chr20 27459897 27459925 -39208080 + AT_rich Low_complexity Low_complexity 1 28 0 2214 73 0 10 chr20 27459955 27460270 -39207735 + AluY SINE Alu 1 312 0 417 257 103 62 chr20 27460320 27460388 -39207617 + L1M4 LINE L1 3658 3722 -2424 2336 65 3 10 chr20 27460388 27460698 -39207307 - AluY SINE Alu -3 308 1 417 257 103 62 chr20 27460698 27460736 -39207269 + L1M4 LINE L1 3722 3757 -2389 2086 118 3 3 chr20 27460736 27461042 -39206963 + AluSq SINE Alu 1 306 -7 417 257 103 62 chr20 27461042 27461417 -39206588 + L1M4 LINE L1 3757 4160 -1986 1387 127 33 118 chr20 27461417 27461747 -39206258 + AluSx SINE Alu 1 302 0 584 156 73 0 chr20 27461785 27461881 -39206124 + AluJb SINE Alu 190 292 -20 2331 67 7 0 chr20 27461899 27462198 -39205807 + AluSg SINE Alu 1 301 -9 476 264 174 0 chr20 27462433 27462588 -39205417 - L2 LINE L2 0 3313 3132 2213 65 3 56 chr20 27462919 27463243 -39204762 - AluSp SINE Alu -5 308 2 23 33 0 0 chr20 27464612 27464642 -39203363 + GC_rich Low_complexity Low_complexity 1 30 0 2424 49 10 3 chr20 27465859 27466166 -39201839 - AluY SINE Alu -2 309 1 998 133 0 30 chr20 27466295 27466460 -39201545 + AluSx SINE Alu 1 160 -152 1192 104 6 6 chr20 27466490 27466503 -39201502 + AluSc SINE Alu 119 131 -178 1949 131 0 7 chr20 27466503 27466801 -39201204 + AluSc SINE Alu 1 296 -13 1192 104 6 6 chr20 27466801 27466969 -39201036 + AluSc SINE Alu 130 300 -9 888 165 0 47 chr20 27466972 27467142 -39200863 + FRAM SINE Alu 1 162 -14 2230 58 0 49 chr20 27467302 27467629 -39200376 + AluY SINE Alu 1 311 0 1215 279 127 21 chr20 27467735 27468270 -39199735 + L2 LINE L2 2221 2812 -502 2240 151 12 60 chr20 27468337 27468768 -39199237 - LTR3 LTR ERVK -22 410 1 48207 119 15 23 chr20 27468770 27471682 -39196323 - HERVK3 LTR ERVK -2 7241 4307 1855 91 94 7 chr20 27471682 27471958 -39196047 + AluSg SINE Alu 1 300 -10 48207 119 15 23 chr20 27471958 27475070 -39192935 - HERVK3 LTR ERVK -2936 4307 1171 2469 71 0 0 chr20 27475070 27475379 -39192626 + AluY SINE Alu 1 309 -2 48207 119 15 23 chr20 27475379 27476252 -39191753 - HERVK3 LTR ERVK -6072 1171 404 2210 87 7 3 chr20 27476252 27476551 -39191454 + AluSc SINE Alu 1 300 -9 48207 119 15 23 chr20 27476551 27476950 -39191055 - HERVK3 LTR ERVK -6839 404 3 2396 147 7 55 chr20 27476973 27477410 -39190595 - LTR3 LTR ERVK -16 416 1 521 254 207 39 chr20 27477410 27477796 -39190209 + L2 LINE L2 2831 3281 -32 4432 161 51 35 chr20 27477796 27478674 -39189331 + MER4D LTR ERV1 1 892 -11 3738 134 20 84 chr20 27478950 27479036 -39188969 - LTR8 LTR ERV1 0 691 601 1993 102 0 34 chr20 27479036 27479223 -39188782 - AluSx SINE Alu 0 320 146 2122 101 14 7 chr20 27479223 27479520 -39188485 - AluSx SINE Alu -11 301 3 1993 102 0 34 chr20 27479520 27479662 -39188343 - AluSx SINE Alu -174 146 1 3738 134 20 84 chr20 27479662 27480312 -39187693 - LTR8 LTR ERV1 -90 601 1 1615 155 14 3 chr20 27480326 27480616 -39187389 + AluSq SINE Alu 2 294 -19 2408 44 0 7 chr20 27480746 27481041 -39186964 + AluY SINE Alu 2 294 -17 273 68 227 0 chr20 27481292 27481336 -39186669 + MIR SINE MIR 79 132 -130 650 233 106 47 chr20 27482345 27482581 -39185424 + MIR SINE MIR 11 260 -2 494 279 53 62 chr20 27482653 27482714 -39185291 - MIR SINE MIR -36 226 166 575 205 24 0 chr20 27482714 27482841 -39185164 + FLAM_C SINE Alu 1 130 -3 494 279 53 62 chr20 27482841 27483005 -39185000 - MIR SINE MIR -96 166 3 250 311 127 40 chr20 27483353 27483732 -39184273 - L2 LINE L2 -559 2755 2344 * 299 324 11 91 chr20 27483727 27483903 -39184102 - MIR3 SINE MIR -34 174 13 202 261 165 26 chr20 27484015 27484130 -39183875 - MIR3 SINE MIR -64 144 14 2105 102 0 0 chr20 27484198 27484493 -39183512 + AluY SINE Alu 1 295 -16 2172 94 3 7 chr20 27484694 27485001 -39183004 - AluSq SINE Alu -7 306 1 1671 188 10 13 chr20 27485130 27485434 -39182571 + AluJb SINE Alu 1 303 -9 1788 141 0 42 chr20 27485655 27485799 -39182206 + AluSx SINE Alu 1 149 -163 2077 114 10 10 chr20 27485799 27486096 -39181909 + AluSq SINE Alu 1 297 -16 1788 141 0 42 chr20 27486096 27486263 -39181742 + AluSx SINE Alu 149 299 -13 2166 93 0 3 chr20 27486410 27486701 -39181304 + AluSx SINE Alu 1 290 -22 1433 204 143 49 chr20 27486789 27486897 -39181108 - L1MB5 LINE L1 -4 6162 6065 371 94 0 0 chr20 27486897 27486961 -39181044 + L1MA3 LINE L1 6242 6305 0 1433 204 143 49 chr20 27486961 27487069 -39180936 - L1MB5 LINE L1 -101 6065 5968 225 103 0 0 chr20 27487069 27487098 -39180907 - MER58 DNA MER1_type -6 2414 2386 1433 204 143 49 chr20 27487098 27487195 -39180810 - L1MB5 LINE L1 -198 5968 5881 2036 103 41 3 chr20 27487195 27487487 -39180518 - AluSq SINE Alu -10 303 1 1433 204 143 49 chr20 27487487 27487810 -39180195 - L1MB5 LINE L1 -285 5881 5449 2293 92 3 0 chr20 27488048 27488351 -39179654 + AluSg SINE Alu 1 304 -6 1312 216 40 7 chr20 27488567 27488864 -39179141 + AluJo SINE Alu 1 307 -5 325 357 34 34 chr20 27489149 27489440 -39178565 + L3 LINE CR1 551 841 -736 779 293 83 58 chr20 27489447 27489542 -39178463 - L2 LINE L2 0 3313 3222 2195 86 10 7 chr20 27489542 27489844 -39178161 + AluSp SINE Alu 1 303 -10 779 293 83 58 chr20 27489844 27490215 -39177790 - L2 LINE L2 -91 3222 2835 285 196 0 18 chr20 27490553 27490609 -39177396 + L2 LINE L2 3200 3254 -18 347 230 40 63 chr20 27491479 27491605 -39176400 - L1MC5 LINE L1 -30 7931 7809 2046 120 7 0 chr20 27491712 27492004 -39176001 + AluSq SINE Alu 1 294 -19 358 271 150 21 chr20 27492694 27492834 -39175171 + MIR SINE MIR 7 164 -98 754 225 25 148 chr20 27492844 27493270 -39174735 - MER21B LTR ERV1 -227 349 6 710 43 0 0 chr20 27493404 27493498 -39174507 + L1PA8 LINE L1 6076 6169 -3 2001 118 3 0 chr20 27493801 27494097 -39173908 - AluSg SINE Alu -12 298 2 28 0 0 26 chr20 27494265 27494283 -39173722 + AT_rich Low_complexity Low_complexity 1 18 -20 2076 115 0 0 chr20 27494283 27494570 -39173435 - AluSg SINE Alu -23 287 1 28 0 0 26 chr20 27494570 27494590 -39173415 + AT_rich Low_complexity Low_complexity 18 38 0 1500 126 0 9 chr20 27494719 27494949 -39173056 + AluSg/x SINE Alu 84 311 -1 544 330 73 4 chr20 27495210 27495443 -39172562 + MIR SINE MIR 14 262 0 298 279 100 21 chr20 27496239 27496379 -39171626 - L1ME3A LINE L1 -26 6144 5994 1578 169 6 54 chr20 27496432 27496745 -39171260 + AluJb SINE Alu 3 300 -12 349 214 56 84 chr20 27496770 27496913 -39171092 - L1ME3A LINE L1 -196 5968 5829 2024 106 3 10 chr20 27496913 27497215 -39170790 - AluSp SINE Alu -13 300 1 349 214 56 84 chr20 27497215 27497249 -39170756 - L1ME3A LINE L1 -335 5829 5796 1892 134 10 0 chr20 27497252 27497550 -39170455 - AluSx SINE Alu -11 301 1 1056 71 0 0 chr20 27497595 27497735 -39170270 - AluY SINE Alu 0 311 172 2278 77 6 10 chr20 27497740 27498052 -39169953 - AluY SINE Alu 0 311 1 1121 253 133 21 chr20 27498052 27498578 -39169427 - L1ME3A LINE L1 -1087 5059 4475 1472 197 3 10 chr20 27498584 27498651 -39169354 - L1MB7 LINE L1 0 6184 6118 662 246 183 27 chr20 27498651 27498989 -39169016 - L1MD3 LINE L1 -1867 6128 5738 327 307 36 36 chr20 27499100 27499240 -39168765 + L2 LINE L2 3174 3313 0 391 268 242 22 chr20 27499499 27499768 -39168237 + L1MC4a LINE L1 5897 6224 -1584 2640 145 28 147 chr20 27499963 27500420 -39167585 - L1MB3 LINE L1 -83 6336 5826 1675 100 38 0 chr20 27500420 27500660 -39167345 + AluSp SINE Alu 1 249 -64 2168 96 3 0 chr20 27500662 27500963 -39167042 - AluSp SINE Alu -11 302 1 2640 145 28 147 chr20 27500963 27501299 -39166706 - L1MB3 LINE L1 -594 5825 5722 669 91 10 20 chr20 27501306 27501405 -39166600 - AluSq SINE Alu -15 298 201 1525 90 66 0 chr20 27501410 27501622 -39166383 - AluSq SINE Alu -87 226 1 7735 191 42 86 chr20 27501625 27502008 -39165997 - L1MB3 LINE L1 -693 5723 5325 2221 106 0 3 chr20 27502008 27502311 -39165694 - AluSq SINE Alu -11 302 1 7735 191 42 86 chr20 27502311 27502532 -39165473 - L1MB3 LINE L1 -1091 5325 5096 2460 61 0 3 chr20 27502532 27502842 -39165163 - AluY SINE Alu -2 309 1 7735 191 42 86 chr20 27502842 27503115 -39164890 - L1MB3 LINE L1 -1320 5096 4812 2253 99 3 3 chr20 27503115 27503427 -39164578 - AluSx SINE Alu 0 312 1 7735 191 42 86 chr20 27503427 27504054 -39163951 - L1MB3 LINE L1 -1604 4812 4159 2059 129 0 0 chr20 27504054 27504349 -39163656 - AluSg SINE Alu -15 295 1 7735 191 42 86 chr20 27504349 27504665 -39163340 - L1MB3 LINE L1 -2257 4159 3830 2276 86 3 0 chr20 27504665 27504968 -39163037 - AluSp SINE Alu -9 304 1 7735 191 42 86 chr20 27504968 27505700 -39162305 - L1MB3 LINE L1 -2586 3830 3067 1976 142 0 3 chr20 27505700 27506010 -39161995 - AluSx SINE Alu -3 309 1 1985 123 3 17 chr20 27506010 27506310 -39161695 - AluSx SINE Alu -16 296 1 7735 191 42 86 chr20 27506310 27506437 -39161568 - L1MB3 LINE L1 -3127 3289 3158 1128 114 48 0 chr20 27506442 27506608 -39161397 - AluSg/x SINE Alu -5 305 132 2243 98 0 0 chr20 27506608 27506904 -39161101 - AluSx SINE Alu -15 297 2 252 184 101 0 chr20 27506928 27507037 -39160968 + (TTATA)n Simple_repeat Simple_repeat 5 124 0 1293 167 33 84 chr20 27507038 27507489 -39160516 - L1MB3 LINE L1 -3734 2648 2224 1421 191 11 11 chr20 27507493 27507775 -39160230 + MER2 DNA MER2_type 39 320 -25 2009 124 24 122 chr20 27507783 27508138 -39159867 - L1MB3 LINE L1 -4167 2217 1829 1647 151 7 11 chr20 27508138 27508416 -39159589 + AluSx SINE Alu 1 277 -35 2009 124 24 122 chr20 27508416 27508512 -39159493 - L1MB3 LINE L1 -4555 1829 1819 907 208 25 121 chr20 27508512 27508578 -39159427 - MLT1A1 LTR MaLR 0 365 294 1538 187 10 23 chr20 27508578 27508883 -39159122 - AluJo SINE Alu -11 301 1 907 208 25 121 chr20 27508883 27509220 -39158785 - MLT1A1 LTR MaLR -71 294 1 2009 124 24 122 chr20 27509220 27509275 -39158730 - L1MB3 LINE L1 -4565 1819 1760 7965 151 73 18 chr20 27509279 27509436 -39158569 - L1MB3 LINE L1 -4753 1631 1484 1297 154 12 130 chr20 27509436 27509616 -39158389 - AluJo SINE Alu -14 298 98 2198 97 0 22 chr20 27509616 27509927 -39158078 + AluSg SINE Alu 1 304 -6 1297 154 12 130 chr20 27509927 27509949 -39158056 - AluJo SINE Alu -214 98 75 2195 78 10 32 chr20 27509949 27510257 -39157748 - AluY SINE Alu -10 301 1 1297 154 12 130 chr20 27510257 27510391 -39157614 - AluJo SINE Alu -237 75 1 7965 151 73 18 chr20 27510391 27511760 -39156245 - L1MB3 LINE L1 -4900 1484 22 2302 90 0 0 chr20 27511975 27512276 -39155729 + AluSq SINE Alu 1 301 -12 1047 278 42 19 chr20 27512277 27512637 -39155368 + L1MC4 LINE L1 6701 7068 -974 452 165 0 0 chr20 27512651 27512736 -39155269 - AluS SINE Alu -4 307 223 1279 182 0 0 chr20 27512781 27513012 -39154993 - AluJb SINE Alu -81 231 1 742 223 58 107 chr20 27513049 27513528 -39154477 + L1MC5 LINE L1 6980 7435 -526 509 169 0 0 chr20 27513535 27513612 -39154393 + AluJ/FLAM SINE Alu 7 83 -229 784 218 112 79 chr20 27513613 27513853 -39154152 + L1MC5 LINE L1 7432 7663 -298 2078 102 14 7 chr20 27513853 27514148 -39153857 + AluSx SINE Alu 1 297 -15 784 218 112 79 chr20 27514148 27514173 -39153832 + L1MC5 LINE L1 7663 7686 -275 1503 125 125 8 chr20 27514173 27514429 -39153576 - AluSg1 SINE Alu -13 296 11 784 218 112 79 chr20 27514429 27514644 -39153361 + L1MC5 LINE L1 7686 7929 -32 2225 119 0 0 chr20 27514667 27514979 -39153026 + AluSx SINE Alu 1 312 0 432 130 0 0 chr20 27516459 27516528 -39151477 + (TCTA)n Simple_repeat Simple_repeat 2 70 0 653 191 0 17 chr20 27516538 27516653 -39151352 - FLAM_C SINE Alu -25 118 6 1869 130 10 3 chr20 27516726 27517044 -39150961 - AluSx SINE Alu 0 320 1 2200 104 0 10 chr20 27517611 27517920 -39150085 - AluSq SINE Alu -7 306 1 357 24 0 0 chr20 27518116 27518158 -39149847 + (TCTA)n Simple_repeat Simple_repeat 4 45 0 2144 93 0 10 chr20 27518160 27518451 -39149554 - AluSg SINE Alu -22 288 1 1908 98 45 21 chr20 27519339 27519487 -39148518 - AluSp SINE Alu -19 294 151 2316 68 0 3 chr20 27519487 27519783 -39148222 - AluY SINE Alu -14 297 3 1908 98 45 21 chr20 27519783 27519921 -39148084 - AluSp SINE Alu -162 151 1 836 166 14 0 chr20 27520333 27520472 -39147533 - FLAM_C SINE Alu -1 142 2 3432 189 69 140 chr20 27520962 27521152 -39146853 - L1M4 LINE L1 -953 5193 4991 183 42 0 0 chr20 27521152 27521176 -39146829 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1976 136 14 0 chr20 27521180 27521474 -39146531 - AluSx SINE Alu -14 298 1 3432 189 69 140 chr20 27521474 27521782 -39146223 - L1M4 LINE L1 -1158 4988 4660 731 137 8 0 chr20 27521782 27521899 -39146106 - AluJb SINE Alu -181 131 14 3432 189 69 140 chr20 27521899 27521987 -39146018 - L1M4 LINE L1 -1486 4660 4567 1727 165 3 3 chr20 27521987 27522278 -39145727 + AluJb SINE Alu 1 291 -21 3432 189 69 140 chr20 27522278 27522906 -39145099 - L1M4 LINE L1 -1579 4567 3988 2183 122 42 11 chr20 27522906 27523259 -39144746 + THE1B LTR MaLR 1 364 0 3432 189 69 140 chr20 27523259 27523540 -39144465 - L1M4 LINE L1 -2158 3988 3689 3124 178 111 77 chr20 27523599 27524457 -39143548 - MER21A LTR ERV1 -36 895 9 769 215 110 66 chr20 27524469 27524679 -39143326 - L1M4 LINE L1 -2566 3580 3381 1592 109 109 0 chr20 27524679 27524944 -39143061 + AluJo SINE Alu 1 294 -18 769 215 110 66 chr20 27524944 27525143 -39142862 - L1M4 LINE L1 -2765 3381 3153 259 254 32 103 chr20 27525168 27525294 -39142711 - MER58B DNA MER1_type -46 295 179 1509 208 70 88 chr20 27525344 27525704 -39142301 - L1M4 LINE L1 -2994 3152 2804 2476 53 0 0 chr20 27525704 27526008 -39141997 - L1PA5 LINE L1 0 6154 5851 1509 208 70 88 chr20 27526008 27526206 -39141799 - L1M4 LINE L1 -3342 2804 2604 320 128 0 0 chr20 27526260 27526307 -39141698 - L1ME2 LINE L1 -49 6115 6069 22 35 0 0 chr20 27526794 27526823 -39141182 + AT_rich Low_complexity Low_complexity 1 29 0 2203 70 0 20 chr20 27527907 27528209 -39139796 + AluY SINE Alu 1 296 -15 245 316 194 19 chr20 27529027 27529233 -39138772 + L2 LINE L2 2695 2936 -378 2056 74 64 11 chr20 27529949 27530232 -39137773 + AluSx SINE Alu 1 298 -14 1292 99 0 0 chr20 27530232 27530404 -39137601 + AluSc SINE Alu 132 303 -6 2078 122 3 3 chr20 27530404 27530716 -39137289 + AluSx SINE Alu 1 312 0 2068 122 0 3 chr20 27530787 27531083 -39136922 + AluSx SINE Alu 1 295 -17 2030 103 4 4 chr20 27531182 27531487 -39136518 + AluSc SINE Alu 1 305 0 665 263 37 5 chr20 27531928 27532118 -39135887 - MIR SINE MIR -32 230 35 212 246 169 46 chr20 27532134 27532394 -39135611 + L2 LINE L2 2817 3108 -205 187 185 108 92 chr20 27535779 27535844 -39132161 + L3 LINE CR1 839 904 -673 279 324 9 27 chr20 27536217 27536328 -39131677 - L1ME LINE L1 -488 5633 5525 252 0 0 0 chr20 27536781 27536809 -39131196 + (TTTTG)n Simple_repeat Simple_repeat 2 29 0 1560 160 7 7 chr20 27536812 27537093 -39130912 - AluJo SINE Alu -31 281 1 385 271 26 3 chr20 27537150 27537312 -39130693 + MER20 DNA MER1_type 6 219 0 27 0 0 0 chr20 27537426 27537453 -39130552 + AT_rich Low_complexity Low_complexity 1 27 0 2049 113 0 0 chr20 27538273 27538595 -39129410 + AluSx SINE Alu 1 322 0 270 122 61 0 chr20 27538595 27538644 -39129361 - L1MC4 LINE L1 0 8042 7991 319 233 128 30 chr20 27538908 27539041 -39128964 - L1MC4 LINE L1 -417 7625 7480 269 362 0 0 chr20 27539238 27539365 -39128640 + L1MC5 LINE L1 7314 7440 -521 524 276 51 15 chr20 27539688 27539884 -39128121 + MLT1G LTR MaLR 349 551 -39 325 269 42 159 chr20 27539966 27540182 -39127823 + L1MC4 LINE L1 7687 7836 -206 1738 155 14 0 chr20 27540182 27540460 -39127545 - AluJb SINE Alu -30 282 1 325 269 42 159 chr20 27540460 27540645 -39127360 + L1MC4 LINE L1 7836 8041 -1 1983 131 0 0 chr20 27540656 27540946 -39127059 + AluSx SINE Alu 1 290 -22 828 178 0 7 chr20 27540971 27541123 -39126882 + AluJo SINE Alu 9 159 -153 251 298 11 11 chr20 27541901 27541995 -39126010 - MER46C DNA MER2_type -133 205 112 215 280 38 32 chr20 27542629 27542786 -39125219 + (CCCTG)n Simple_repeat Simple_repeat 3 160 0 804 182 0 0 chr20 27544852 27544984 -39123021 + FLAM_A SINE Alu 1 132 -1 1433 135 139 11 chr20 27545158 27545424 -39122581 - AluJo SINE Alu -12 300 1 230 300 170 0 chr20 27545530 27545630 -39122375 - L2 LINE L2 -561 2753 2637 916 221 69 64 chr20 27545974 27546443 -39121562 + L1MEd LINE L1 1069 1542 -4988 387 0 0 0 chr20 27546463 27546506 -39121499 + (TA)n Simple_repeat Simple_repeat 1 43 0 663 59 0 0 chr20 27546507 27546592 -39121413 - AluSp/q SINE Alu -15 298 214 1319 169 143 7 chr20 27546672 27546944 -39121061 - AluJb SINE Alu -3 309 1 1649 208 186 2 chr20 27546979 27547462 -39120543 + L1ME3A LINE L1 5601 6170 0 760 141 0 62 chr20 27547465 27547593 -39120412 + FLAM_C SINE Alu 2 121 -22 534 12 75 0 chr20 27547595 27547675 -39120330 + A-rich Low_complexity Low_complexity 4 89 0 1757 151 20 10 chr20 27547677 27547806 -39120199 + AluSx SINE Alu 1 127 -185 438 20 0 0 chr20 27547806 27547857 -39120148 + (CA)n Simple_repeat Simple_repeat 2 52 0 1757 151 20 10 chr20 27547857 27548051 -39119954 + AluSx SINE Alu 127 312 0 830 264 109 28 chr20 27548209 27548531 -39119474 + MLT1D LTR MaLR 128 475 -30 307 289 21 41 chr20 27548656 27548753 -39119252 + L1MEd LINE L1 1897 1991 -4549 1194 96 0 24 chr20 27548754 27548920 -39119085 - AluSg/x SINE Alu -17 293 132 2244 81 17 7 chr20 27548920 27549217 -39118788 - AluSq SINE Alu -9 304 5 1222 89 0 0 chr20 27549249 27549417 -39118588 + AluSg/x SINE Alu 143 310 0 1115 139 42 29 chr20 27549426 27549664 -39118341 + L1 LINE L1 3515 3755 -2391 1441 98 59 0 chr20 27549728 27549932 -39118073 + AluSq SINE Alu 1 216 -97 2104 90 9 47 chr20 27552065 27552386 -39115619 - AluSx SINE Alu -3 309 1 1939 136 0 37 chr20 27556466 27556789 -39111216 - AluSx SINE Alu -1 311 1 2156 113 3 13 chr20 27556880 27557191 -39110814 + AluSq SINE Alu 1 308 -5 2346 90 0 3 chr20 27557191 27557501 -39110504 + AluSc SINE Alu 1 309 0 601 223 82 30 chr20 27557985 27558223 -39109782 + MLT1G1 LTR MaLR 70 312 -249 502 94 24 0 chr20 27558238 27558323 -39109682 + L1PA16 LINE L1 6079 6165 -1 1458 256 146 50 chr20 27558463 27559288 -39108717 + L1MC4 LINE L1 6728 7631 -411 245 226 65 0 chr20 27559415 27559477 -39108528 + MER63 DNA MER1_type 27 718 -344 300 183 87 26 chr20 27559706 27559821 -39108184 - L1M4 LINE L1 -821 5325 5204 574 223 41 51 chr20 27559963 27560160 -39107845 - L1MC4 LINE L1 -371 7671 7477 235 228 47 102 chr20 27560219 27560346 -39107659 + L1MC4 LINE L1 7923 8042 0 27 0 0 0 chr20 27561338 27561365 -39106640 + AT_rich Low_complexity Low_complexity 1 27 0 2144 94 0 17 chr20 27562365 27562662 -39105343 - AluSg SINE Alu -18 292 1 1206 220 57 21 chr20 27562665 27563037 -39104968 + Charlie1b DNA MER1_type 113 497 -26 2442 71 0 0 chr20 27564417 27564725 -39103280 + AluY SINE Alu 1 308 -3 270 242 0 91 chr20 27566476 27566575 -39101430 + L1ME4a LINE L1 5730 5819 -302 2225 63 35 3 chr20 27566596 27566880 -39101125 - AluY SINE Alu -18 293 1 268 256 96 45 chr20 27566907 27567063 -39100942 + L1ME4a LINE L1 5955 6118 -3 269 272 66 41 chr20 27569034 27569209 -39098796 + MIR3 SINE MIR 11 182 -33 2019 120 10 7 chr20 27570003 27570311 -39097694 + AluSx SINE Alu 1 309 -3 279 274 150 0 chr20 27571099 27571212 -39096793 - MIR SINE MIR -105 157 28 234 0 0 0 chr20 27574084 27574110 -39093895 + (A)n Simple_repeat Simple_repeat 1 26 0 1126 197 27 0 chr20 27575843 27576066 -39091939 - AluJb SINE Alu -83 229 1 1986 141 0 0 chr20 27576123 27576420 -39091585 - AluSx SINE Alu -15 297 1 3089 108 12 9 chr20 27576677 27577104 -39090901 + MSTA LTR MaLR 1 428 0 249 350 66 7 chr20 27577791 27577928 -39090077 - MIR SINE MIR -89 173 29 180 0 0 0 chr20 27578308 27578328 -39089677 + (TCCC)n Simple_repeat Simple_repeat 3 22 0 2679 179 47 14 chr20 27579250 27579763 -39088242 + L1MA9 LINE L1 5783 6312 0 315 192 0 0 chr20 27579843 27579921 -39088084 + (TGGA)n Simple_repeat Simple_repeat 3 80 0 2022 124 0 0 chr20 27580120 27580411 -39087594 + AluSg1 SINE Alu 1 291 -18 318 337 91 57 chr20 27580470 27580611 -39087394 - L1MC4 LINE L1 -6 8036 7901 1863 201 25 3 chr20 27580611 27580969 -39087036 - MER47A DNA MER2_type 0 366 1 318 337 91 57 chr20 27580969 27581091 -39086914 - L1MC4 LINE L1 -141 7901 7764 426 283 71 39 chr20 27581096 27581407 -39086598 - L1MC5 LINE L1 -348 7613 7293 1102 231 157 22 chr20 27583120 27583542 -39084463 + MLT1G LTR MaLR 1 446 -144 900 126 52 13 chr20 27586558 27586733 -39081272 + MSTA LTR MaLR 146 342 -84 249 293 81 0 chr20 27587583 27587682 -39080323 + MER94 DNA DNA 2 108 -26 2270 118 136 16 chr20 27587719 27588101 -39079904 + MSTA LTR MaLR 1 428 0 8805 171 32 17 chr20 27588101 27589715 -39078290 + MSTA-int LTR MaLR 1 1637 -14 2191 104 129 69 chr20 27589730 27589898 -39078107 + MSTA LTR MaLR 1 158 -270 2148 102 3 16 chr20 27589898 27590212 -39077793 - AluY SINE Alu -1 310 1 2191 104 129 69 chr20 27590212 27590447 -39077558 + MSTA LTR MaLR 158 428 0 186 133 0 0 chr20 27590504 27590534 -39077471 + (GAAAA)n Simple_repeat Simple_repeat 1 30 0 199 275 114 46 chr20 27590801 27590932 -39077073 - MIR3 SINE MIR -65 143 4 437 301 61 12 chr20 27591009 27591172 -39076833 + MIR SINE MIR 20 190 -72 626 303 60 30 chr20 27592533 27592954 -39075051 - L1MEd LINE L1 -3720 2437 2000 2313 92 3 0 chr20 27592954 27593258 -39074747 + AluSx SINE Alu 1 305 -7 626 303 60 30 chr20 27593258 27593485 -39074520 - L1MEd LINE L1 -4157 2000 1781 376 324 129 0 chr20 27593491 27593661 -39074344 - L1MEd LINE L1 -4578 1732 1541 859 248 115 35 chr20 27593710 27593873 -39074132 + L1ME3A LINE L1 5731 5880 -290 1731 130 95 0 chr20 27593873 27594157 -39073848 + AluJb SINE Alu 1 311 -1 859 248 115 35 chr20 27594157 27594392 -39073613 + L1ME3A LINE L1 5880 6161 -9 214 261 27 5 chr20 27594591 27594707 -39073298 + L2 LINE L2 3130 3306 -7 408 269 34 29 chr20 27594765 27594973 -39073032 - L1MEd LINE L1 -4614 1515 1307 * 459 105 12 47 chr20 27594946 27595032 -39072973 - L1MD1 LINE L1 -1 6224 6142 380 309 79 9 chr20 27595035 27595296 -39072709 - L1MEd LINE L1 -4862 1257 1063 430 288 40 36 chr20 27595315 27595617 -39072388 - L1MEd LINE L1 -5108 1011 709 1562 171 82 7 chr20 27596066 27596346 -39071659 - AluJo SINE Alu -11 301 1 327 300 20 10 chr20 27596367 27596467 -39071538 - L1MEd LINE L1 -5930 189 89 287 272 71 33 chr20 27596471 27596655 -39071350 - L1MC/D LINE L1 -1952 5856 5666 266 297 69 40 chr20 27596655 27596756 -39071249 + L2 LINE L2 3169 3272 0 1606 158 22 0 chr20 27597082 27597360 -39070645 + MER2 DNA MER2_type 1 284 -61 1827 176 0 3 chr20 27597407 27597691 -39070314 - AluJo SINE Alu -29 283 1 2210 113 7 0 chr20 27597776 27598077 -39069928 - AluSg SINE Alu -7 303 1 309 118 0 0 chr20 27599043 27599094 -39068911 + (TA)n Simple_repeat Simple_repeat 2 52 0 1847 174 7 7 chr20 27599508 27599812 -39068193 + AluJo SINE Alu 1 304 -8 774 246 17 11 chr20 27601003 27601178 -39066827 + AluJo SINE Alu 117 292 -20 2171 128 3 0 chr20 27601295 27601591 -39066414 - AluSx SINE Alu -15 297 1 301 235 88 29 chr20 27601710 27601812 -39066193 + L1ME4a LINE L1 5291 5398 -2387 432 261 113 55 chr20 27601890 27602164 -39065841 + L1ME4a LINE L1 5523 5819 -302 1829 175 3 19 chr20 27602164 27602473 -39065532 - AluJo SINE Alu -8 304 1 432 261 113 55 chr20 27602473 27602509 -39065496 + L1ME4a LINE L1 5819 5851 -270 210 255 0 0 chr20 27602565 27602616 -39065389 - MIR SINE MIR -53 209 159 375 173 0 27 chr20 27602833 27602908 -39065097 + MER116 DNA Mariner 7 79 -1 301 267 110 55 chr20 27602909 27603055 -39064950 + L1ME LINE L1 5319 5472 -649 1105 142 6 34 chr20 27603248 27603424 -39064581 + AluJo SINE Alu 125 295 -17 1454 141 0 9 chr20 27603781 27604008 -39063997 + AluJb SINE Alu 87 311 -1 7515 83 6 21 chr20 27604686 27605760 -39062245 - MER11C LTR ERVK -14 1057 1 1306 211 18 98 chr20 27607686 27608136 -39059869 + L1MA8 LINE L1 4752 5165 -981 1763 150 177 0 chr20 27608147 27608508 -39059497 + MER83 LTR ERV1 24 448 0 1554 163 176 0 chr20 27608546 27608841 -39059164 - MER7A DNA MER2_type 0 346 2 1980 153 24 18 chr20 27608850 27609190 -39058815 + MER2 DNA MER2_type 3 344 0 2030 205 40 4 chr20 27609201 27609689 -39058316 + L1MA8 LINE L1 5791 6320 -10 635 154 17 0 chr20 27609699 27609816 -39058189 + L1MB2 LINE L1 6049 6167 -4 432 281 139 7 chr20 27609990 27610293 -39057712 + HAL1 LINE L1 1241 1583 -924 2067 119 10 30 chr20 27610567 27610869 -39057136 + AluSx SINE Alu 1 296 -16 250 206 48 16 chr20 27611100 27611163 -39056842 + HAL1 LINE L1 2338 2402 -105 1670 165 23 19 chr20 27611211 27611520 -39056485 - AluJb SINE Alu -2 310 1 212 374 0 17 chr20 27612848 27613027 -39054978 + (CAGGG)n Simple_repeat Simple_repeat 1 176 0 580 239 122 61 chr20 27615289 27615502 -39052503 + MIR SINE MIR 27 252 -10 272 231 39 39 chr20 27615894 27616024 -39051981 + L1MC4a LINE L1 7028 7157 -651 704 247 117 0 chr20 27616498 27616745 -39051260 + L1M4c LINE L1 1192 1467 -4917 521 146 45 0 chr20 27616747 27616836 -39051169 + MER41A LTR ERV1 373 465 -89 459 0 0 0 chr20 27616836 27616887 -39051118 + (A)n Simple_repeat Simple_repeat 1 51 0 2279 110 0 28 chr20 27616889 27617208 -39050797 + AluSx SINE Alu 3 312 0 439 158 29 164 chr20 27617235 27617406 -39050599 + L1 LINE L1 4181 4328 -1818 1169 180 0 5 chr20 27617406 27617600 -39050405 + AluJo SINE Alu 1 193 -119 1919 165 112 31 chr20 27617600 27618048 -39049957 + MER51A LTR ERV1 1 484 -150 401 22 0 0 chr20 27618048 27618094 -39049911 - AluY SINE Alu -265 47 2 417 196 10 21 chr20 27618140 27618237 -39049768 - L1M4 LINE L1 -1367 4779 4684 2176 165 74 25 chr20 27619117 27619589 -39048416 - LTR34 LTR ERV1 0 699 205 2733 139 89 14 chr20 27619589 27620107 -39047898 + MER4D LTR ERV1 1 557 -346 422 100 0 0 chr20 27620109 27620179 -39047826 - Alu SINE Alu -1 310 241 669 230 27 27 chr20 27620179 27620366 -39047639 + MER4D LTR ERV1 717 903 0 310 267 69 35 chr20 27620824 27620940 -39047065 + L1MC/D LINE L1 5344 5463 -2345 396 155 71 0 chr20 27621089 27621172 -39046833 - MLT1B LTR MaLR -185 205 117 493 242 73 105 chr20 27621172 27621420 -39046585 + MER21B LTR ERV1 1 240 -623 1248 236 65 8 chr20 27621425 27621793 -39046212 + MER21B LTR ERV1 421 809 -54 732 139 9 0 chr20 27621824 27621939 -39046066 - MLT1B LTR MaLR -274 116 1 284 319 53 0 chr20 27621945 27622039 -39045966 + L1MC/D LINE L1 5489 5587 -2221 516 227 23 0 chr20 27622039 27622182 -39045823 + L1M4 LINE L1 5330 5472 -702 267 213 96 57 chr20 27622315 27622446 -39045559 + MIR3 SINE MIR 63 201 -7 275 204 44 66 chr20 27623177 27623358 -39044647 + (CCCCAG)n Simple_repeat Simple_repeat 2 178 0 231 208 33 71 chr20 27623407 27623590 -39044415 + (CCCCAG)n Simple_repeat Simple_repeat 1 176 0 1604 183 23 23 chr20 27624241 27624481 -39043524 + AluJb SINE Alu 5 247 -65 5216 164 15 37 chr20 27624481 27625472 -39042533 - LTR5 LTR ERVK 0 969 1 1604 183 23 23 chr20 27625472 27625537 -39042468 + AluJb SINE Alu 246 310 -2 1457 254 84 50 chr20 27625602 27626176 -39041829 - LTR34 LTR ERV1 -3 696 104 237 237 105 13 chr20 27626201 27626277 -39041728 - MER4C LTR ERV1 -354 111 29 723 181 0 31 chr20 27626391 27626518 -39041487 + FLAM_A SINE Alu 1 123 -10 868 185 80 0 chr20 27627243 27627405 -39040600 - FAM SINE Alu 0 175 1 1595 158 0 74 chr20 27628641 27628938 -39039067 + AluJo SINE Alu 1 275 -37 207 0 0 0 chr20 27628945 27628968 -39039037 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 250 231 0 0 chr20 27629483 27629535 -39038470 - L1ME LINE L1 -526 5595 5544 273 284 9 17 chr20 27629597 27629713 -39038292 - L1ME3A LINE L1 -5 6165 6051 838 115 0 101 chr20 27629722 27629847 -39038158 + AluJo/FLAM SINE Alu 1 110 -192 2076 105 0 0 chr20 27629847 27630113 -39037892 - AluSx SINE Alu -46 266 1 838 115 0 101 chr20 27630113 27630135 -39037870 + AluJo/FLAM SINE Alu 110 133 -169 1766 189 0 10 chr20 27630137 27630439 -39037566 + AluJo SINE Alu 1 299 -13 1901 174 0 3 chr20 27630484 27630771 -39037234 + AluJb SINE Alu 5 290 -22 818 191 66 7 chr20 27630784 27630936 -39037069 + AluJb SINE Alu 123 283 -29 420 263 0 25 chr20 27630965 27631083 -39036922 + L1ME LINE L1 34 148 -5922 634 169 156 19 chr20 27631132 27631292 -39036713 + L1MB8 LINE L1 5992 6173 -5 597 199 78 87 chr20 27631320 27631387 -39036618 + L1ME LINE L1 2230 2296 -3784 2070 163 0 0 chr20 27631387 27631694 -39036311 + AluSx SINE Alu 1 307 -5 597 199 78 87 chr20 27631694 27631958 -39036047 + L1ME LINE L1 2296 2558 -3522 2034 141 0 38 chr20 27631985 27632305 -39035700 + AluSx SINE Alu 1 308 -4 1785 130 38 4 chr20 27632336 27632624 -39035381 - AluSx SINE Alu 0 310 14 21 0 0 0 chr20 27632637 27632658 -39035347 + AT_rich Low_complexity Low_complexity 1 21 0 2377 95 0 0 chr20 27633382 27633677 -39034328 - AluSc SINE Alu -14 295 1 1741 178 0 20 chr20 27633742 27634045 -39033960 - AluJo SINE Alu -15 297 1 1498 183 10 63 chr20 27634087 27634387 -39033618 - AluJo SINE Alu -28 284 1 1121 225 103 105 chr20 27634979 27635155 -39032850 + L1MDa LINE L1 1895 2070 -4470 6870 68 33 25 chr20 27635155 27636929 -39031076 + SVA Other Other 2 1385 -1 1121 225 103 105 chr20 27636929 27637024 -39030981 + L1MDa LINE L1 2070 2164 -4376 2379 74 3 0 chr20 27637024 27637308 -39030697 + AluY SINE Alu 1 285 -26 1121 225 103 105 chr20 27637308 27638029 -39029976 + L1MDa LINE L1 2164 2888 -3652 1012 154 31 72 chr20 27638075 27638270 -39029735 + AluJo SINE Alu 1 187 -125 2279 114 0 25 chr20 27638276 27638460 -39029545 - AluSx SINE Alu 0 312 138 2182 132 0 0 chr20 27638460 27638756 -39029249 - AluSq SINE Alu -17 296 1 2279 114 0 25 chr20 27638756 27638886 -39029119 - AluSx SINE Alu -174 138 6 1024 220 67 113 chr20 27638887 27639428 -39028577 + L1MCa LINE L1 167 682 -5882 226 227 27 0 chr20 27639504 27639579 -39028426 + GA-rich Low_complexity Low_complexity 1 77 0 790 162 42 0 chr20 27639589 27639731 -39028274 + L1MCa LINE L1 564 711 -5334 2236 222 28 10 chr20 27639758 27640257 -39027748 + MLT2B3 LTR ERVL 1 508 -46 1801 198 20 11 chr20 27640330 27640774 -39027231 + L1MCa LINE L1 747 1194 -4851 874 215 6 0 chr20 27640787 27640959 -39027046 + FRAM SINE Alu 2 174 -2 1310 164 119 74 chr20 27640960 27641010 -39026995 + L1MCa LINE L1 1167 1213 -5351 1374 160 197 0 chr20 27641010 27641254 -39026751 + AluJo SINE Alu 1 292 -10 1310 164 119 74 chr20 27641254 27641624 -39026381 + L1MCa LINE L1 1213 1606 -4958 490 166 113 0 chr20 27641649 27641800 -39026205 + L1MCa LINE L1 1541 1708 -4856 * 1742 202 42 25 chr20 27641799 27642353 -39025652 + L1MCa LINE L1 3134 3696 -2868 357 302 44 63 chr20 27642479 27642540 -39025465 + L1MCa LINE L1 3757 3818 -2746 1790 168 3 13 chr20 27642540 27642849 -39025156 - AluJb SINE Alu -6 306 1 357 302 44 63 chr20 27642849 27642946 -39025059 + L1MCa LINE L1 3818 3912 -2652 821 134 0 39 chr20 27642947 27643074 -39024931 + FLAM_C SINE Alu 5 126 -17 2162 122 14 7 chr20 27643087 27643383 -39024622 + AluSx SINE Alu 2 299 -13 26 30 0 0 chr20 27643383 27643416 -39024589 + AT_rich Low_complexity Low_complexity 1 33 0 1914 127 24 14 chr20 27644041 27644332 -39023673 + AluSg SINE Alu 1 294 -16 2526 149 42 2 chr20 27644368 27644778 -39023227 + MSTA LTR MaLR 3 428 0 2266 100 27 7 chr20 27644833 27645133 -39022872 - AluSx SINE Alu -6 306 1 2213 133 3 3 chr20 27645724 27646032 -39021973 + AluSx SINE Alu 1 308 -4 666 205 157 6 chr20 27646578 27646744 -39021261 - MIR SINE MIR -1 261 71 2314 93 0 0 chr20 27647153 27647464 -39020541 + AluSq SINE Alu 1 311 -2 201 309 29 0 chr20 27648300 27648368 -39019637 - L3 LINE CR1 -5 1572 1503 249 263 111 76 chr20 27649027 27649198 -39018807 - MER104 DNA Tc2 -3 177 1 930 230 133 112 chr20 27649258 27649305 -39018700 - L1MC4 LINE L1 0 8042 7997 2466 56 3 0 chr20 27649305 27649607 -39018398 + AluY SINE Alu 1 303 -8 2029 105 23 7 chr20 27649609 27649914 -39018091 + AluSg SINE Alu 1 310 0 930 230 133 112 chr20 27649914 27650550 -39017455 - L1MC4 LINE L1 -45 7997 7342 1639 172 7 13 chr20 27650593 27650895 -39017110 - AluJb SINE Alu -7 305 6 2158 102 3 0 chr20 27651959 27652254 -39015751 - AluSp SINE Alu -1 312 17 1939 130 10 0 chr20 27652254 27652546 -39015459 - AluSx SINE Alu -17 295 1 2300 73 3 3 chr20 27652650 27652951 -39015054 + AluY SINE Alu 1 301 -10 216 0 0 0 chr20 27652981 27653005 -39015000 + (TTAAA)n Simple_repeat Simple_repeat 3 26 0 731 159 16 0 chr20 27653013 27653139 -39014866 + FLAM_A SINE Alu 14 141 -1 386 328 35 29 chr20 27653372 27653543 -39014462 + MIR SINE MIR 81 252 -10 254 253 27 13 chr20 27653952 27654027 -39013978 + MLT1K LTR MaLR 513 588 0 2065 114 0 3 chr20 27654189 27654487 -39013518 + AluSx SINE Alu 1 297 -15 204 209 47 0 chr20 27654549 27654592 -39013413 - MER5A DNA MER1_type -1 188 144 1998 116 7 23 chr20 27655297 27655599 -39012406 + AluSx SINE Alu 1 297 -15 2068 89 4 0 chr20 27656114 27656424 -39011581 + AluSc SINE Alu 1 311 0 708 142 63 16 chr20 27656500 27656627 -39011378 + AluJb SINE Alu 2 134 -178 7105 54 5 17 chr20 27656970 27658305 -39009700 + L1PA8 LINE L1 4841 6172 0 2013 65 50 11 chr20 27658327 27658644 -39009361 + AluSq SINE Alu 1 328 0 780 106 0 0 chr20 27660065 27660169 -39007836 + MER46A DNA MER2_type 1 104 -132 1628 138 16 41 chr20 27660170 27660490 -39007515 - AluJb SINE Alu 0 312 1 857 124 0 0 chr20 27660490 27660619 -39007386 - AluJb SINE Alu -183 129 1 797 124 108 0 chr20 27660619 27660748 -39007257 + MER46A DNA MER2_type 94 236 0 359 170 132 107 chr20 27660751 27660869 -39007136 - L2 LINE L2 -17 3296 3182 2070 106 27 0 chr20 27660869 27661161 -39006844 + AluSx SINE Alu 1 300 -12 1809 145 0 7 chr20 27661169 27661472 -39006533 + AluSx SINE Alu 1 301 -11 359 170 132 107 chr20 27661472 27661503 -39006502 - L2 LINE L2 -137 3176 3134 371 200 106 111 chr20 27662016 27662163 -39005842 + MIR SINE MIR 22 169 -93 1643 176 24 0 chr20 27662163 27662458 -39005547 - AluJb SINE Alu -8 304 3 371 200 106 111 chr20 27662458 27662490 -39005515 + MIR SINE MIR 169 200 -62 226 250 0 0 chr20 27662553 27662601 -39005404 - MER5B DNA MER1_type -49 129 82 2799 139 65 45 chr20 27662617 27662948 -39005057 - MER21A LTR ERV1 -34 897 551 2074 121 0 3 chr20 27662948 27663254 -39004751 - AluSx SINE Alu -7 305 1 2799 139 65 45 chr20 27663254 27663434 -39004571 - MER21A LTR ERV1 -380 551 376 770 155 263 24 chr20 27663439 27663507 -39004498 - MER21A LTR ERV1 -667 264 214 2101 105 0 10 chr20 27663507 27663811 -39004194 + AluSc SINE Alu 1 301 -8 770 155 263 24 chr20 27663811 27663955 -39004050 - MER21A LTR ERV1 -717 214 1 313 240 94 0 chr20 27663956 27664052 -39003953 + L2 LINE L2 2434 2538 -776 1695 121 7 15 chr20 27664070 27664343 -39003662 + AluSq SINE Alu 41 311 -2 407 266 0 0 chr20 27664343 27664456 -39003549 - L1MD3 LINE L1 -12 7983 7871 536 180 193 7 chr20 27664482 27664632 -39003373 - L1ME3A LINE L1 -10 6160 5983 4006 56 48 0 chr20 27665270 27665771 -39002234 - LTR17 LTR ERV1 0 780 256 523 167 61 68 chr20 27665796 27665928 -39002077 - L1MD3 LINE L1 -107 7873 7571 935 164 0 68 chr20 27666189 27666366 -39001639 + FRAM SINE Alu 1 165 -1 2076 112 7 0 chr20 27667228 27667523 -39000482 + AluSp SINE Alu 2 298 -15 1483 184 0 4 chr20 27667534 27667801 -39000204 + AluJb SINE Alu 1 266 -46 2326 86 3 0 chr20 27668513 27668815 -38999190 - AluSp SINE Alu -10 303 1 1781 128 77 0 chr20 27669239 27669513 -38998492 - AluSx SINE Alu -17 295 1 4219 213 161 102 chr20 27669558 27670084 -38997921 - L1MC3 LINE L1 -8 7777 7284 456 218 9 55 chr20 27670084 27670099 -38997906 - MLT1F1 LTR MaLR -428 139 125 1858 138 3 0 chr20 27670099 27670396 -38997609 - AluJb SINE Alu -14 298 1 456 218 9 55 chr20 27670396 27670490 -38997515 - MLT1F1 LTR MaLR -442 125 35 4219 213 161 102 chr20 27670490 27671154 -38996851 - L1MC3 LINE L1 -501 7284 6661 1812 161 3 3 chr20 27671154 27671452 -38996553 - AluJb SINE Alu -14 298 1 4219 213 161 102 chr20 27671452 27671821 -38996184 - L1MC3 LINE L1 -1124 6661 6316 2466 101 8 8 chr20 27671821 27672176 -38995829 + THE1A LTR MaLR 1 355 0 4219 213 161 102 chr20 27672176 27672319 -38995686 - L1MC3 LINE L1 -1469 6316 6183 2173 114 0 0 chr20 27672319 27672625 -38995380 - AluSc SINE Alu -3 306 1 4219 213 161 102 chr20 27672625 27672729 -38995276 - L1MC3 LINE L1 -1602 6183 6087 1624 173 3 19 chr20 27672729 27673036 -38994969 + AluJo SINE Alu 1 302 -10 4219 213 161 102 chr20 27673036 27673303 -38994702 - L1MC3 LINE L1 -1698 6087 5460 2258 111 0 0 chr20 27673630 27673937 -38994068 + AluSx SINE Alu 1 307 -5 291 202 141 30 chr20 27674207 27674306 -38993699 + L2 LINE L2 3197 3306 -7 1609 182 38 54 chr20 27674352 27674743 -38993262 - MLT1B LTR MaLR 0 390 6 534 160 29 11 chr20 27675334 27675509 -38992496 + (TCTCTG)n Simple_repeat Simple_repeat 3 180 0 435 234 0 62 chr20 27675755 27675947 -38992058 + (CA)n Simple_repeat Simple_repeat 1 180 0 779 189 0 0 chr20 27677798 27677930 -38990075 + FLAM_C SINE Alu 2 133 0 1761 137 17 14 chr20 27678463 27678755 -38989250 - AluSx SINE Alu -14 298 6 2060 104 3 16 chr20 27679090 27679398 -38988607 + AluSx SINE Alu 1 304 -8 21 36 0 0 chr20 27679603 27679631 -38988374 + AT_rich Low_complexity Low_complexity 1 28 0 2177 87 35 0 chr20 27679934 27680223 -38987782 + AluSc SINE Alu 1 299 -10 1581 183 3 20 chr20 27680234 27680540 -38987465 + AluJb SINE Alu 1 301 -11 589 152 18 91 chr20 27680911 27681093 -38986912 + MLT1G1 LTR MaLR 234 389 -206 261 233 14 27 chr20 27681066 27681139 -38986866 + MLT1G1 LTR MaLR 331 402 -153 * 318 150 12 50 chr20 27681127 27681207 -38986798 + MLT1G1 LTR MaLR 519 595 0 882 125 0 22 chr20 27681227 27681363 -38986642 - FLAM_C SINE Alu 0 133 1 1873 141 20 3 chr20 27681554 27681853 -38986152 + AluJb SINE Alu 1 304 -8 26 30 0 0 chr20 27682193 27682226 -38985779 + AT_rich Low_complexity Low_complexity 1 33 0 299 224 45 15 chr20 27682244 27682311 -38985694 - L2 LINE L2 -5 3308 3240 492 305 24 24 chr20 27682317 27682484 -38985521 - L2 LINE L2 -881 2433 2267 497 164 0 0 chr20 27682663 27682736 -38985269 - AluJ/FLAM SINE Alu -239 73 1 2004 133 0 0 chr20 27682766 27683059 -38984946 + AluSx SINE Alu 1 293 -19 1556 160 0 62 chr20 27683075 27683382 -38984623 - AluJo SINE Alu -24 288 1 1894 288 97 17 chr20 27683995 27684832 -38983173 + HAL1 LINE L1 2 905 -1602 2273 81 0 3 chr20 27684984 27685281 -38982724 + AluSc SINE Alu 1 296 -13 279 0 0 0 chr20 27685357 27685388 -38982617 + (TA)n Simple_repeat Simple_repeat 1 31 0 1414 123 26 0 chr20 27685408 27685635 -38982370 - AluSx SINE Alu -20 292 60 1708 174 0 13 chr20 27685650 27685954 -38982051 + AluJo SINE Alu 1 300 -12 1451 215 169 51 chr20 27685956 27686641 -38981364 + HAL1 LINE L1 1059 1824 -683 824 152 0 36 chr20 27686869 27687007 -38980998 + FLAM_C SINE Alu 2 134 -9 233 163 20 0 chr20 27687263 27687312 -38980693 + (TA)n Simple_repeat Simple_repeat 1 50 0 1619 170 24 7 chr20 27688844 27689132 -38978873 + AluJb SINE Alu 1 293 -19 868 145 8 0 chr20 27691043 27691174 -38976831 + FLAM_C SINE Alu 1 132 -1 1938 139 3 0 chr20 27691355 27691649 -38976356 - AluSx SINE Alu -17 295 1 2007 129 0 0 chr20 27691660 27691955 -38976050 - AluSx SINE Alu -17 295 1 216 320 127 36 chr20 27692416 27692639 -38975366 - L2 LINE L2 -236 3036 2798 772 301 111 23 chr20 27692684 27693079 -38974926 + LTR16C LTR ERVL 55 484 -7 1423 170 47 37 chr20 27693260 27693560 -38974445 - AluJo SINE Alu -9 303 1 2439 162 35 28 chr20 27694754 27695211 -38972794 + LTR32 LTR ERVL 12 471 0 275 295 244 14 chr20 27695282 27695499 -38972506 + L2 LINE L2 2974 3240 -73 2329 42 3 0 chr20 27695705 27695991 -38972014 - AluY SINE Alu -24 287 1 235 331 110 49 chr20 27696221 27696384 -38971621 - L2 LINE L2 -546 2768 2596 267 295 101 16 chr20 27696514 27696643 -38971362 - MIR SINE MIR -102 160 21 235 325 86 52 chr20 27696805 27697153 -38970852 - L2 LINE L2 -1339 1975 1616 988 216 78 51 chr20 27699042 27699084 -38968921 + MER58B DNA MER1_type 37 76 -2344 2325 82 0 25 chr20 27699084 27699402 -38968603 - AluSg SINE Alu 0 310 1 988 216 78 51 chr20 27699402 27699655 -38968350 + MER58B DNA MER1_type 76 340 -1 2307 113 18 0 chr20 27700232 27700560 -38967445 + HERVK22 LTR ERVK 574 907 -6336 2109 169 0 0 chr20 27700550 27700887 -38967118 + HERVK22 LTR ERVK 282 618 -6219 * 2219 169 19 24 chr20 27700921 27701334 -38966671 - LTR3 LTR ERVK -16 416 6 2091 128 3 0 chr20 27701406 27701695 -38966310 - AluSq SINE Alu -23 290 1 180 0 0 0 chr20 27701701 27701721 -38966284 + (ATTG)n Simple_repeat Simple_repeat 4 23 0 1824 129 65 0 chr20 27701721 27701984 -38966021 - AluSx SINE Alu -32 280 1 695 156 0 33 chr20 27701987 27702109 -38965896 - AluJb SINE Alu -9 303 186 1097 159 95 95 chr20 27702146 27702472 -38965533 - THE1C LTR MaLR -49 326 1 502 292 129 54 chr20 27702472 27702845 -38965160 - MLT1J2 LTR MaLR -3 447 47 7658 50 2 5 chr20 27704590 27705737 -38962268 - L1PA6 LINE L1 0 6154 5010 1761 181 7 0 chr20 27705922 27706214 -38961791 + AluJo SINE Alu 10 303 -9 1451 225 73 60 chr20 27706521 27706810 -38961195 + L2 LINE L2 1722 2023 -1291 2061 144 0 22 chr20 27706810 27707129 -38960876 - AluSx SINE Alu 0 312 1 1451 225 73 60 chr20 27707129 27707360 -38960645 + L2 LINE L2 2023 2249 -1065 796 252 154 66 chr20 27707404 27707844 -38960161 + L1MB4 LINE L1 5362 5840 -340 2074 141 0 0 chr20 27708167 27708466 -38959539 - AluSx SINE Alu -13 299 1 2429 178 64 2 chr20 27708828 27708854 -38959151 - L1 LINE L1 -836 5310 5287 1869 131 4 4 chr20 27708854 27709122 -38958883 - AluSx SINE Alu -44 268 1 2429 178 64 2 chr20 27709122 27709595 -38958410 - L1 LINE L1 -859 5287 4780 1804 152 3 33 chr20 27709595 27709731 -38958274 - MER4A LTR ERV1 0 664 525 2095 108 4 0 chr20 27709731 27710033 -38957972 - AluSg1 SINE Alu 0 303 1 1804 152 3 33 chr20 27710033 27710250 -38957755 - MER4A LTR ERV1 -139 525 262 582 163 0 10 chr20 27710252 27710350 -38957655 - MER4A LTR ERV1 -567 97 1 17078 108 45 10 chr20 27710358 27713025 -38954980 - MER4A-int LTR ERV1 -2 6596 3837 8972 112 158 128 chr20 27713024 27713382 -38954623 - MER4A-int LTR ERV1 -2917 3681 3335 * 2062 129 7 20 chr20 27713382 27713684 -38954321 - AluSx SINE Alu -14 298 1 8972 112 158 128 chr20 27713684 27713789 -38954216 - MER4A-int LTR ERV1 -3263 3335 3235 477 0 0 0 chr20 27713795 27713848 -38954157 + (TA)n Simple_repeat Simple_repeat 2 54 0 2381 76 3 3 chr20 27713848 27714143 -38953862 - AluSc SINE Alu -11 298 1 8972 112 158 128 chr20 27714143 27715944 -38952061 - MER4A-int LTR ERV1 -3363 3235 1489 2434 94 3 0 chr20 27715944 27716253 -38951752 - AluSx SINE Alu -2 310 1 1723 109 0 83 chr20 27716253 27716529 -38951476 - AluSx SINE Alu -59 253 1 8972 112 158 128 chr20 27716529 27716728 -38951277 - MER4A-int LTR ERV1 -5109 1489 1297 252 0 0 0 chr20 27716728 27716756 -38951249 + (CA)n Simple_repeat Simple_repeat 2 29 0 8972 112 158 128 chr20 27716756 27716899 -38951106 - MER4A-int LTR ERV1 -5301 1297 993 253 156 0 44 chr20 27716919 27716964 -38951041 - LTR49 LTR ERV1 -282 313 271 332 127 0 70 chr20 27716964 27717035 -38950970 - MER4A-int LTR ERV1 -5845 753 688 378 0 0 0 chr20 27717042 27717084 -38950921 + (TG)n Simple_repeat Simple_repeat 1 42 0 2379 137 53 25 chr20 27717084 27717729 -38950276 - MER4A-int LTR ERV1 -5792 806 1 1896 99 6 73 chr20 27717732 27717823 -38950182 - MER4A LTR ERV1 0 664 568 1607 266 43 68 chr20 27717823 27718451 -38949554 - LTR9 LTR ERV1 0 612 1 1896 99 6 73 chr20 27718451 27718673 -38949332 - MER4A LTR ERV1 -96 568 372 348 115 19 0 chr20 27718673 27718725 -38949280 - MER4A LTR ERV1 -351 313 261 671 110 0 20 chr20 27718725 27718825 -38949180 - MER4A LTR ERV1 -566 98 1 4789 190 26 97 chr20 27718825 27719245 -38948760 - L1 LINE L1 -807 5339 4891 2300 88 3 25 chr20 27719245 27719562 -38948443 - AluSp SINE Alu -3 310 1 4789 190 26 97 chr20 27719562 27719648 -38948357 - L1 LINE L1 -1255 4891 4800 1861 139 4 0 chr20 27719648 27719915 -38948090 - AluJo SINE Alu -16 296 29 4789 190 26 97 chr20 27719915 27720663 -38947342 - L1 LINE L1 -1346 4800 4000 2384 91 0 0 chr20 27720663 27720959 -38947046 - AluSg SINE Alu -14 296 1 4789 190 26 97 chr20 27720959 27721260 -38946745 - L1 LINE L1 -2146 4000 4019 2067 130 20 0 chr20 27721260 27721552 -38946453 - AluSx SINE Alu -14 298 1 4789 190 26 97 chr20 27721552 27721676 -38946329 - L1 LINE L1 -2126 4020 3889 2354 96 0 16 chr20 27722489 27722792 -38945213 - AluSp SINE Alu -15 298 1 321 276 82 22 chr20 27722876 27723010 -38944995 - MIR SINE MIR -101 161 20 3249 191 29 34 chr20 27723120 27723894 -38944111 - L1MA4 LINE L1 0 6171 5352 227 160 0 20 chr20 27723916 27723966 -38944039 - L1MA4 LINE L1 -932 5373 5325 853 199 0 13 chr20 27723968 27724124 -38943881 - FRAM SINE Alu 0 176 23 11195 174 33 54 chr20 27724124 27724854 -38943151 - L1 LINE L1 -1015 6550 5806 2038 103 0 60 chr20 27724854 27725155 -38942850 - AluSc SINE Alu -26 283 1 11195 174 33 54 chr20 27725155 27725233 -38942772 - L1 LINE L1 -1759 5806 5728 2303 112 3 6 chr20 27725233 27725547 -38942458 - AluSp SINE Alu 0 313 1 11195 174 33 54 chr20 27725547 27726573 -38941432 - L1 LINE L1 -1837 5728 4682 4897 139 19 65 chr20 27726573 27727285 -38940720 - LTR25 LTR ERV1 0 794 124 2314 80 0 3 chr20 27727285 27727572 -38940433 - AluSc SINE Alu -15 294 9 4897 139 19 65 chr20 27727572 27727691 -38940314 - LTR25 LTR ERV1 -670 124 1 11195 174 33 54 chr20 27727691 27727827 -38940178 - L1 LINE L1 -2883 4682 4545 1824 154 34 0 chr20 27727827 27728120 -38939885 + AluJb SINE Alu 1 303 -9 11195 174 33 54 chr20 27728120 27728408 -38939597 - L1 LINE L1 -3020 4545 4253 1661 188 3 16 chr20 27728408 27728711 -38939294 + AluJb SINE Alu 1 299 -13 1537 226 49 7 chr20 27728715 27729020 -38938985 - 7SLRNA srpRNA srpRNA -2 318 1 11195 174 33 54 chr20 27729020 27729316 -38938689 - L1 LINE L1 -3315 4250 3949 2113 88 57 27 chr20 27729316 27729612 -38938393 - AluSx SINE Alu -7 305 1 11195 174 33 54 chr20 27729612 27729822 -38938183 - L1 LINE L1 -3616 3949 3736 2326 78 0 0 chr20 27729822 27730131 -38937874 - AluY SINE Alu 0 309 1 11195 174 33 54 chr20 27730131 27730763 -38937242 - L1 LINE L1 -3829 3736 3214 1684 175 17 3 chr20 27730764 27731056 -38936949 - AluSq SINE Alu -17 296 1 2140 216 44 4 chr20 27731087 27731609 -38936396 - L1 LINE L1 -4528 3037 2495 1507 165 79 10 chr20 27731612 27731903 -38936102 - AluJb SINE Alu -1 311 1 4453 196 62 3 chr20 27731903 27732789 -38935216 - L1 LINE L1 -4362 2203 1266 1115 179 36 0 chr20 27733345 27733540 -38934465 + AluJo SINE Alu 1 202 -110 297 154 0 0 chr20 27733544 27733596 -38934409 + FAM SINE Alu 128 179 0 1174 246 120 14 chr20 27734049 27734407 -38933598 - MER89 LTR ERV1 0 559 164 1406 231 32 21 chr20 27734563 27734901 -38933104 - L1MB5 LINE L1 -8 6166 5825 705 148 0 17 chr20 27734910 27735025 -38932980 - AluJb SINE Alu 0 312 200 1829 141 10 17 chr20 27735025 27735316 -38932689 - MER1B DNA MER1_type -50 289 1 373 197 56 0 chr20 27735469 27735540 -38932465 + MER2 DNA MER2_type 266 340 -5 1846 175 51 6 chr20 27735544 27735899 -38932106 + L1MB2 LINE L1 5783 6153 -18 1838 150 42 18 chr20 27735906 27736192 -38931813 - AluJo SINE Alu -19 293 1 2063 118 7 3 chr20 27736282 27736571 -38931434 + AluJo SINE Alu 7 296 -16 2347 52 0 43 chr20 27736976 27737281 -38930724 - AluY SINE Alu -19 292 1 2431 162 55 55 chr20 27737288 27737836 -38930169 - L1 LINE L1 -1826 4320 3773 243 0 0 0 chr20 27737848 27737875 -38930130 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 2121 124 0 0 chr20 27737876 27738159 -38929846 - AluSx SINE Alu -27 285 3 287 236 51 51 chr20 27738167 27738183 -38929822 - L1MA10 LINE L1 -1 6333 6318 989 214 96 7 chr20 27738183 27738463 -38929542 - L1ME1 LINE L1 -4 6162 5858 5839 203 58 8 chr20 27738473 27739097 -38928908 - L1MA4 LINE L1 -7 6293 5702 2289 113 10 0 chr20 27739097 27739399 -38928606 - AluSx SINE Alu -7 305 1 5839 203 58 8 chr20 27739399 27741487 -38926518 - L1MA4 LINE L1 -598 5702 3437 2192 105 10 13 chr20 27741653 27741959 -38926046 + AluSg SINE Alu 1 305 -5 2319 87 0 7 chr20 27741959 27742256 -38925749 + AluSg1 SINE Alu 1 296 -13 638 172 16 0 chr20 27744546 27744668 -38923337 - L1MA4 LINE L1 -2699 3447 3324 * 1511 209 42 34 chr20 27744662 27744728 -38923277 - L1MA4 LINE L1 -3311 2835 2771 2389 72 14 0 chr20 27744728 27745020 -38922985 - AluY SINE Alu -15 296 1 1511 209 42 34 chr20 27745020 27745042 -38922963 - L1MA4 LINE L1 -3375 2771 2751 1440 185 31 27 chr20 27745042 27745334 -38922671 + AluJo SINE Alu 1 293 -19 1511 209 42 34 chr20 27745334 27745651 -38922354 - L1MA4 LINE L1 -3395 2751 2426 490 306 31 55 chr20 27745666 27745960 -38922045 - ERVL LTR ERVL -1060 4425 4210 1319 208 156 80 chr20 27746110 27746212 -38921793 - MER45B DNA AcHobo -552 1029 936 290 155 14 0 chr20 27746212 27746222 -38921783 + (TA)n Simple_repeat Simple_repeat 2 10 -63 2336 110 0 0 chr20 27746222 27746521 -38921484 + AluSg SINE Alu 1 299 -11 290 155 14 0 chr20 27746521 27746581 -38921424 + (TA)n Simple_repeat Simple_repeat 10 73 0 1319 208 156 80 chr20 27746581 27746749 -38921256 - MER45B DNA AcHobo -645 936 782 1625 199 31 0 chr20 27746749 27747036 -38920969 - AluJb SINE Alu -11 301 6 1319 208 156 80 chr20 27747036 27747347 -38920658 - MER45B DNA AcHobo -799 782 327 323 180 131 0 chr20 27747363 27747424 -38920581 + MER45B DNA AcHobo 252 320 -720 1091 172 27 160 chr20 27748307 27748719 -38919286 - MLT1A1 LTR MaLR -3 362 6 299 238 50 12 chr20 27748815 27748895 -38919110 - LTR16B LTR ERVL -288 176 94 8221 170 67 32 chr20 27751181 27751679 -38916326 + L1MA4 LINE L1 3456 3935 -2365 1812 142 3 61 chr20 27751679 27751990 -38916015 - AluJb SINE Alu -19 293 1 8221 170 67 32 chr20 27751990 27752802 -38915203 + L1MA4 LINE L1 3935 4716 -1584 1666 162 30 17 chr20 27752802 27753099 -38914906 + AluJo SINE Alu 1 301 -11 8221 170 67 32 chr20 27753099 27754543 -38913462 + L1MA4 LINE L1 4716 6300 0 290 242 15 0 chr20 27754938 27755004 -38913001 + LTR37B LTR ERV1 346 412 -56 786 202 10 13 chr20 27755124 27755409 -38912596 + MLT1A2 LTR MaLR 5 351 -23 760 262 32 40 chr20 27755679 27755931 -38912074 + L1ME2 LINE L1 5895 6144 -20 368 252 29 10 chr20 27756376 27756479 -38911526 + L1MC5 LINE L1 7734 7838 -123 2117 121 3 10 chr20 27756689 27756987 -38911018 + AluSq SINE Alu 1 296 -17 369 0 0 0 chr20 27757368 27757409 -38910596 + (CAT)n Simple_repeat Simple_repeat 2 42 0 7614 42 9 1 chr20 27757619 27758503 -38909502 + L1PA3 LINE L1 5263 6153 -2 31 0 0 0 chr20 27758503 27758534 -38909471 + AT_rich Low_complexity Low_complexity 1 31 0 6060 67 1 3 chr20 27758534 27759276 -38908729 + L1PA7 LINE L1 5413 6153 -1 216 0 0 0 chr20 27759347 27759371 -38908634 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 325 218 188 64 chr20 27761159 27761457 -38906548 + L1MC5 LINE L1 7554 7888 -73 2621 122 112 2 chr20 27761722 27762141 -38905864 + MER4C LTR ERV1 1 465 0 262 296 0 0 chr20 27762245 27762326 -38905679 - L1M4 LINE L1 -1034 5923 5843 * 1160 274 82 21 chr20 27762305 27762826 -38905179 - L1M4 LINE L1 -1718 5239 4687 827 122 23 0 chr20 27762840 27762971 -38905034 + MER4C LTR ERV1 2 135 -330 2149 52 19 42 chr20 27762986 27763293 -38904712 + AluY SINE Alu 2 301 -10 1218 104 0 0 chr20 27763293 27763456 -38904549 + AluY SINE Alu 133 295 -16 288 89 0 22 chr20 27763456 27763501 -38904504 + MER4C LTR ERV1 128 171 -294 282 341 0 0 chr20 27763511 27763596 -38904409 - L1M4 LINE L1 -2334 4623 4539 473 213 125 31 chr20 27763601 27763761 -38904244 + L1ME2 LINE L1 5980 6154 -10 1590 184 65 0 chr20 27764142 27764435 -38903570 + AluJb SINE Alu 1 312 0 1426 232 171 29 chr20 27764850 27765622 -38902383 + L1M4c LINE L1 548 1429 -4955 1239 268 36 43 chr20 27765619 27766033 -38901972 - L1M4 LINE L1 -6436 423 13 * 339 269 69 113 chr20 27766391 27766726 -38901279 + L1MC5 LINE L1 7609 7928 -33 410 194 60 27 chr20 27766987 27767140 -38900865 + L1ME1 LINE L1 6028 6161 -5 2070 122 7 0 chr20 27767229 27767515 -38900490 - AluSx SINE Alu -24 288 1 653 286 76 13 chr20 27768263 27768501 -38899504 - MIR SINE MIR -1 261 9 2244 201 68 105 chr20 27768765 27769133 -38898872 + MER4E LTR ERV1 1 381 -398 2238 104 0 10 chr20 27769133 27769442 -38898563 + AluSx SINE Alu 7 312 0 2244 201 68 105 chr20 27769442 27769696 -38898309 + MER4E LTR ERV1 381 591 -188 1297 171 123 34 chr20 27769696 27769965 -38898040 - AluJo SINE Alu -9 293 1 2244 201 68 105 chr20 27769965 27770123 -38897882 + MER4E LTR ERV1 591 753 -26 36 29 0 43 chr20 27771520 27771589 -38896416 + AT_rich Low_complexity Low_complexity 1 66 0 10781 170 30 11 chr20 27771830 27774864 -38893141 - L1MA4 LINE L1 -2 7000 3909 * 31971 106 15 59 chr20 27774854 27781291 -38886714 - L1PA7 LINE L1 -4 6150 12 3354 201 35 60 chr20 27781300 27782604 -38885401 - L1MA4 LINE L1 -2923 3925 2645 31609 79 6 9 chr20 27782635 27787789 -38880216 - L1PA7 LINE L1 0 6154 1018 44096 45 1 3 chr20 27787795 27793952 -38874053 - L1PA3 LINE L1 -5 6150 7 5557 168 16 26 chr20 27793966 27795000 -38873005 - L1PA7 LINE L1 -5112 1034 11 225 220 0 0 chr20 27795043 27795093 -38872912 - Tigger3(Golem) DNA MER2_type -2782 247 198 2666 152 75 6 chr20 27795096 27795590 -38872415 - L1PB4 LINE L1 -2 6154 5627 330 214 0 54 chr20 30795673 30795719 -35872286 - MIR SINE MIR -64 144 151 2093 127 0 7 chr20 30795719 30796018 -35871987 - AluSx SINE Alu -15 297 1 330 214 0 54 chr20 30796018 30796088 -35871917 - MIR SINE MIR -56 152 80 1821 118 57 7 chr20 30796309 30796588 -35871417 - AluSx SINE Alu -19 293 1 2570 75 0 0 chr20 30796589 30796897 -35871108 - AluSx SINE Alu -4 308 1 184 202 184 37 chr20 30797310 30797419 -35870586 + MIR3 SINE MIR 8 132 -76 281 50 0 0 chr20 30797422 30797462 -35870543 - AluSx SINE Alu -3 298 259 1526 131 5 0 chr20 30797462 30797683 -35870322 - AluSx SINE Alu -90 222 1 2292 103 3 0 chr20 30797693 30797995 -35870010 - AluSx SINE Alu -9 303 1 729 240 17 6 chr20 30797995 30798170 -35869835 - MLT1G1 LTR MaLR -379 216 40 2732 79 26 0 chr20 30798190 30798532 -35869473 - L1PA10 LINE L1 0 6168 5818 1035 140 7 0 chr20 30798535 30798685 -35869320 - FRAM SINE Alu -15 151 1 714 185 0 0 chr20 30798879 30798987 -35869018 + AluJ SINE Alu 2 109 -203 2132 100 4 4 chr20 30798999 30799318 -35868687 - AluSc SINE Alu 0 319 1 883 152 18 61 chr20 30799322 30799377 -35868628 - L1MDa LINE L1 -6366 174 118 2107 151 0 0 chr20 30799377 30799688 -35868317 - AluSx SINE Alu -1 311 1 883 152 18 61 chr20 30799688 30799796 -35868209 - L1MDa LINE L1 -6422 118 18 929 214 49 35 chr20 30799878 30800163 -35867842 - L1MC5 LINE L1 -493 7468 7180 719 272 210 7 chr20 30800157 30800466 -35867539 + L1MC/D LINE L1 5355 5726 -2082 * 1233 173 10 10 chr20 30800470 30800678 -35867327 + AluJb SINE Alu 87 294 -18 671 267 54 47 chr20 30800834 30801092 -35866913 + LTR16C LTR ERVL 135 394 -97 2388 63 7 7 chr20 30801226 30801528 -35866477 + AluY SINE Alu 1 302 -9 591 154 0 0 chr20 30801634 30801770 -35866235 + (GAATG)n Satellite Satellite 4 139 0 372 172 0 0 chr20 30801790 30801877 -35866128 + (GAATG)n Satellite Satellite 2 88 0 609 190 0 0 chr20 30801918 30802097 -35865908 + (GAATG)n Satellite Satellite 2 180 0 1163 121 2 6 chr20 30802128 30802619 -35865386 + (GAATG)n Satellite Satellite 1 489 0 1002 166 3 9 chr20 30802635 30803287 -35864718 + (GAATG)n Satellite Satellite 1 648 0 825 139 0 0 chr20 30803318 30803491 -35864514 + (GAATG)n Satellite Satellite 3 175 0 936 144 4 7 chr20 30803507 30804484 -35863521 + (GAATG)n Satellite Satellite 1 973 0 729 168 0 0 chr20 30804499 30804678 -35863327 + (GAATG)n Satellite Satellite 2 180 0 789 159 0 0 chr20 30804696 30805026 -35862979 + (GAATG)n Satellite Satellite 1 330 0 744 164 0 0 chr20 30805039 30805216 -35862789 + (GAATG)n Satellite Satellite 4 180 0 828 151 0 0 chr20 30805270 30805449 -35862556 + (GAATG)n Satellite Satellite 1 179 0 870 140 0 0 chr20 30805484 30805663 -35862342 + (GAATG)n Satellite Satellite 2 180 0 699 174 0 0 chr20 30805689 30805867 -35862138 + (GAATG)n Satellite Satellite 3 180 0 812 147 0 27 chr20 30805924 30806108 -35861897 + (GAATG)n Satellite Satellite 1 179 0 770 171 2 0 chr20 30806149 30806627 -35861378 + (GAATG)n Satellite Satellite 1 479 0 870 135 0 0 chr20 30806657 30806835 -35861170 + (GAATG)n Satellite Satellite 3 180 0 788 162 3 0 chr20 30806846 30807145 -35860860 + (GAATG)n Satellite Satellite 1 300 0 859 128 6 6 chr20 30807192 30807371 -35860634 + (GAATG)n Satellite Satellite 1 179 0 348 206 0 0 chr20 30807398 30807524 -35860481 + (GAATG)n Satellite Satellite 3 128 0 794 131 0 27 chr20 30807541 30807724 -35860281 + (GAATG)n Satellite Satellite 3 180 0 700 158 6 6 chr20 30807741 30807918 -35860087 + (GAATG)n Satellite Satellite 4 180 0 978 144 3 3 chr20 30807959 30808316 -35859689 + (GAATG)n Satellite Satellite 1 357 0 666 190 0 0 chr20 30808337 30808621 -35859384 + (GAATG)n Satellite Satellite 1 284 0 819 167 0 0 chr20 30808646 30809016 -35858989 + (GAATG)n Satellite Satellite 1 370 0 454 207 3 6 chr20 30809039 30809375 -35858630 + (GAATG)n Satellite Satellite 1 334 0 312 212 0 0 chr20 30809402 30809534 -35858471 + (GAATG)n Satellite Satellite 3 134 0 1032 146 0 1 chr20 30809586 30810318 -35857687 + (GAATG)n Satellite Satellite 1 910 0 978 172 4 0 chr20 30810337 30810615 -35857390 + (GAATG)n Satellite Satellite 1 279 0 384 206 0 0 chr20 30810637 30810763 -35857242 + (GAATG)n Satellite Satellite 2 127 0 678 175 0 0 chr20 30810778 30810955 -35857050 + (GAATG)n Satellite Satellite 4 180 0 876 152 0 0 chr20 30810980 30811235 -35856770 + (GAATG)n Satellite Satellite 1 255 0 491 195 0 6 chr20 30811246 30811415 -35856590 + (GAATG)n Satellite Satellite 2 169 0 915 170 3 3 chr20 30811437 30812107 -35855898 + (GAATG)n Satellite Satellite 1 670 0 752 186 3 3 chr20 30812129 30812486 -35855519 + (GAATG)n Satellite Satellite 1 357 0 960 154 0 0 chr20 30812497 30812831 -35855174 + (GAATG)n Satellite Satellite 1 334 0 846 152 0 0 chr20 30812866 30813106 -35854899 + (GAATG)n Satellite Satellite 1 240 0 805 162 1 12 chr20 30813184 30814025 -35853980 + (GAATG)n Satellite Satellite 1 831 0 932 161 2 2 chr20 30814089 30815140 -35852865 + (GAATG)n Satellite Satellite 2 1229 0 828 144 0 0 chr20 30815186 30815473 -35852532 + (GAATG)n Satellite Satellite 1 287 0 978 122 0 0 chr20 30815495 30815675 -35852330 + (GAATG)n Satellite Satellite 1 180 0 887 122 6 0 chr20 30815694 30815866 -35852139 + (GAATG)n Satellite Satellite 3 175 0 748 144 12 0 chr20 30815893 30816066 -35851939 + (GAATG)n Satellite Satellite 1 175 0 1233 134 3 2 chr20 30816082 30816792 -35851213 + (GAATG)n Satellite Satellite 1 891 0 203 103 26 0 chr20 30816810 30816849 -35851156 - HSATII Satellite Satellite -110 60 21 * 675 178 4 4 chr20 30816840 30817335 -35850670 + (GAATG)n Satellite Satellite 1 495 0 873 171 3 0 chr20 30817355 30817998 -35850007 + (GAATG)n Satellite Satellite 1 645 0 247 290 0 0 chr20 30818005 30818067 -35849938 + (GAGTG)n Simple_repeat Simple_repeat 1 62 0 1230 153 0 5 chr20 30818067 30819988 -35848017 + (GAATG)n Satellite Satellite 1 2090 0 699 174 0 0 chr20 30820038 30820552 -35847453 + (GAATG)n Satellite Satellite 1 514 0 1155 146 2 2 chr20 30820568 30821237 -35846768 + (GAATG)n Satellite Satellite 1 848 0 927 144 3 4 chr20 30821248 30821871 -35846134 + (GAATG)n Satellite Satellite 2 800 0 828 171 0 0 chr20 30821890 30822188 -35845817 + (GAATG)n Satellite Satellite 1 298 0 855 175 0 0 chr20 30822210 30822735 -35845270 + (GAATG)n Satellite Satellite 1 525 0 220 208 19 0 chr20 30822735 30822788 -35845217 + (GACTG)n Simple_repeat Simple_repeat 2 55 0 939 138 3 0 chr20 30822793 30823117 -35844888 + (GAATG)n Satellite Satellite 1 325 0 873 163 0 0 chr20 30823136 30823961 -35844044 + (GAATG)n Satellite Satellite 1 825 0 683 194 4 0 chr20 30823989 30824244 -35843761 + (GAATG)n Satellite Satellite 1 256 0 828 168 0 0 chr20 30824262 30824597 -35843408 + (GAATG)n Satellite Satellite 1 335 0 681 144 0 0 chr20 30824617 30824763 -35843242 + (GAATG)n Satellite Satellite 5 150 0 861 136 0 0 chr20 30824777 30824954 -35843051 + (GAATG)n Satellite Satellite 4 180 0 866 136 4 14 chr20 30824973 30825258 -35842747 + (GAATG)n Satellite Satellite 1 282 0 672 133 0 48 chr20 30825276 30825464 -35842541 + (GAATG)n Satellite Satellite 1 179 0 501 193 0 0 chr20 30825483 30825628 -35842377 + (GAATG)n Satellite Satellite 2 146 0 876 160 0 0 chr20 30825649 30826269 -35841736 + (GAATG)n Satellite Satellite 1 620 0 880 110 0 28 chr20 30826289 30826471 -35841534 + (GAATG)n Satellite Satellite 4 180 0 339 132 0 0 chr20 30826491 30826559 -35841446 + (GAATG)n Satellite Satellite 1 68 0 789 172 0 0 chr20 30826574 30826928 -35841077 + (GAATG)n Satellite Satellite 1 354 0 1479 72 1 0 chr20 30826968 30827676 -35840329 + (GAATG)n Satellite Satellite 1 709 0 312 164 0 0 chr20 30827709 30827776 -35840229 + (GAATG)n Satellite Satellite 2 68 0 816 156 0 0 chr20 30827797 30827977 -35840028 + (GAATG)n Satellite Satellite 1 180 0 778 143 0 13 chr20 30827996 30828298 -35839707 + (GAATG)n Satellite Satellite 1 297 0 798 153 0 0 chr20 30828331 30828508 -35839497 + (GAATG)n Satellite Satellite 3 179 0 225 83 83 0 chr20 30828516 30828552 -35839453 - HSATII Satellite Satellite -34 136 98 1035 129 0 0 chr20 30828559 30828909 -35839096 + (GAATG)n Satellite Satellite 1 350 0 723 161 0 0 chr20 30828934 30829114 -35838891 + (GAATG)n Satellite Satellite 1 180 0 446 202 6 0 chr20 30829125 30829303 -35838702 + (GAATG)n Satellite Satellite 1 179 0 707 173 0 3 chr20 30829317 30829676 -35838329 + (GAATG)n Satellite Satellite 1 357 0 1020 128 0 0 chr20 30829710 30829963 -35838042 + (GAATG)n Satellite Satellite 1 253 0 876 152 0 4 chr20 30830005 30830789 -35837216 + (GAATG)n Satellite Satellite 1 959 0 831 161 0 0 chr20 30830802 30830982 -35837023 + (GAATG)n Satellite Satellite 1 180 0 21 57 0 0 chr20 30831499 30831534 -35836471 + AT_rich Low_complexity Low_complexity 1 35 0 391 311 15 15 chr20 30831583 30831718 -35836287 + L1M3c LINE L1 2 136 -6005 1793 243 91 21 chr20 30831743 30832302 -35835703 + L1M2a LINE L1 500 1097 -6469 1125 200 14 9 chr20 30832345 30832648 -35835357 + L1M2a LINE L1 2868 3405 -4161 2187 186 24 95 chr20 30832648 30832813 -35835192 - LTR54 LTR ERV1 0 510 335 2241 99 0 31 chr20 30832813 30833136 -35834869 + AluSq SINE Alu 1 313 0 2187 186 24 95 chr20 30833136 30833519 -35834486 - LTR54 LTR ERV1 -175 335 1 661 195 49 0 chr20 30833519 30833642 -35834363 - MER57-int LTR ERV1 -393 7144 7016 1518 159 15 18 chr20 30833662 30833973 -35834032 - MER61B LTR ERV1 -28 396 1 1090 197 127 84 chr20 30833973 30834129 -35833876 - MER57-int LTR ERV1 -516 7021 6873 2252 74 0 3 chr20 30834129 30834438 -35833567 + AluSc SINE Alu 1 308 0 1090 197 127 84 chr20 30834438 30834650 -35833355 - MER57-int LTR ERV1 -664 6873 6636 2409 232 24 18 chr20 30834687 30835239 -35832766 - MER57-int LTR ERV1 -768 4103 3549 1431 172 14 21 chr20 30835249 30835528 -35832477 + MER31-int LTR ERV1 3547 3823 -1113 1008 175 96 13 chr20 30835523 30835791 -35832214 + MER31-int LTR ERV1 4002 5977 -621 * 629 248 63 76 chr20 30836053 30836356 -35831649 - LTR57-int LTR ERVL -3771 1572 1274 2378 114 0 38 chr20 30836361 30836701 -35831304 + Tigger2a DNA MER2_type 3 329 -2379 2874 141 27 14 chr20 30836701 30837140 -35830865 - MER65A LTR ERV1 0 445 1 2378 114 0 38 chr20 30837140 30837168 -35830837 + Tigger2a DNA MER2_type 329 357 -77 2104 117 75 3 chr20 30837170 30837504 -35830501 - MER83 LTR ERV1 0 448 91 4460 172 10 26 chr20 30837508 30838953 -35829052 + L1MA6 LINE L1 4597 5983 -317 1679 213 134 43 chr20 30838951 30839213 -35828792 + L1MD2 LINE L1 5641 5878 -2064 * 2097 118 28 0 chr20 30839213 30839500 -35828505 + AluSx SINE Alu 1 295 -17 1679 213 134 43 chr20 30839500 30839856 -35828149 + L1MD2 LINE L1 5878 7931 -11 415 301 15 30 chr20 30839890 30840023 -35827982 + MIR3 SINE MIR 13 143 -65 311 176 24 47 chr20 30840045 30840130 -35827875 + MER113 DNA MER1_type? 11 93 -428 2091 115 3 0 chr20 30840134 30840420 -35827585 + AluSx SINE Alu 1 287 -25 765 313 34 11 chr20 30840749 30841096 -35826909 + L2 LINE L2 2752 3109 -204 210 91 0 0 chr20 30841124 30841157 -35826848 + (CA)n Simple_repeat Simple_repeat 2 34 0 222 204 0 0 chr20 30841434 30841478 -35826527 + (CA)n Simple_repeat Simple_repeat 1 44 0 236 203 329 14 chr20 30841483 30841626 -35826379 + L2 LINE L2 3088 3275 -38 550 284 117 44 chr20 30841636 30841953 -35826052 - L3 LINE CR1 -60 1517 1178 292 305 27 24 chr20 30841967 30842154 -35825851 + MIR SINE MIR 11 250 -12 183 333 31 54 chr20 30842496 30842625 -35825380 + MIR SINE MIR 18 143 -65 289 258 45 0 chr20 30844573 30844639 -35823366 + L2 LINE L2 3243 3311 -2 766 246 68 14 chr20 30845709 30845929 -35822076 - MIR SINE MIR -8 254 23 2023 194 7 61 chr20 30846715 30847127 -35820878 + MLT1B LTR MaLR 1 390 0 27 31 0 62 chr20 30848096 30848160 -35819845 + AT_rich Low_complexity Low_complexity 1 60 0 34272 63 5 7 chr20 30848568 30854110 -35813895 - L1PA5 LINE L1 -2 6152 622 592 118 0 0 chr20 30854110 30854195 -35813810 - L1PA5 LINE L1 -6051 95 11 304 291 108 32 chr20 30854202 30854360 -35813645 + MIR SINE MIR 31 200 -62 1045 157 0 20 chr20 30854428 30854626 -35813379 + L1PB1 LINE L1 5957 6150 -1 186 103 0 0 chr20 30854671 30854700 -35813305 + (TC)n Simple_repeat Simple_repeat 2 30 0 2133 266 62 50 chr20 30855393 30856013 -35811992 + L1M2a LINE L1 1496 2107 -5061 2197 122 7 0 chr20 30856013 30856309 -35811696 + AluSx SINE Alu 1 298 -14 2133 266 62 50 chr20 30856309 30857159 -35810846 + L1M2a LINE L1 2107 2996 -4172 4680 246 168 24 chr20 30857165 30857227 -35810778 + L1M2 LINE L1 11 63 -6786 352 185 0 12 chr20 30857227 30857308 -35810697 - MADE1 DNA Mariner 0 80 1 4680 246 168 24 chr20 30857308 30859334 -35808671 + L1M2 LINE L1 63 2399 -4450 1892 86 0 0 chr20 30859343 30859575 -35808430 + AluSx SINE Alu 12 243 -69 27 0 0 0 chr20 30860476 30860503 -35807502 + AT_rich Low_complexity Low_complexity 1 27 0 6863 171 28 12 chr20 30860612 30862078 -35805927 - L1 LINE L1 -975 6131 4643 3752 238 168 38 chr20 30862090 30863057 -35804948 - L1 LINE L1 -4576 2461 1620 1324 183 25 110 chr20 30863057 30863456 -35804549 + MLT1A1 LTR MaLR 1 365 0 3752 238 168 38 chr20 30863456 30864579 -35803426 - L1 LINE L1 -5417 1620 1 828 236 40 37 chr20 30864585 30864634 -35803371 + L1M2 LINE L1 3568 3615 -3233 2606 55 0 0 chr20 30864634 30864944 -35803061 + AluY SINE Alu 1 310 -1 828 236 40 37 chr20 30864944 30865242 -35802763 + L1M2 LINE L1 3615 3916 -2932 3551 147 18 0 chr20 30865259 30865831 -35802174 + L1PA13 LINE L1 1 582 -6205 10819 174 53 2 chr20 30865847 30867897 -35800108 + L1PA13 LINE L1 3818 5948 -866 2270 127 82 17 chr20 30867897 30868299 -35799706 + MSTA LTR MaLR 1 428 0 10819 174 53 2 chr20 30868299 30869207 -35798798 + L1PA13 LINE L1 5948 6808 -6 3527 220 14 36 chr20 30869224 30870253 -35797752 + L1M2 LINE L1 3922 4927 -1921 240 35 0 0 chr20 30870253 30870282 -35797723 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 1654 125 14 35 chr20 30870282 30870570 -35797435 - L1PA8 LINE L1 -16 6156 5875 1310 51 23 0 chr20 30872390 30872567 -35795438 - L1PA8 LINE L1 -229 5902 5722 318 152 98 11 chr20 30872568 30872660 -35795345 + L1M2 LINE L1 4919 5018 -1830 25 65 0 0 chr20 30874259 30874305 -35793700 + AT_rich Low_complexity Low_complexity 1 46 0 246 32 0 0 chr20 30874868 30874899 -35793106 + (TG)n Simple_repeat Simple_repeat 1 31 0 7841 183 7 0 chr20 30875807 30878307 -35789698 + L1PA15 LINE L1 3661 6159 -6 534 144 0 0 chr20 30878324 30878414 -35789591 - L1 LINE L1 -2585 3561 3472 642 139 15 0 chr20 30878417 30878528 -35789477 + MSTC LTR MaLR 1 116 -249 13845 157 70 34 chr20 30878528 30881228 -35786777 + L1MA1 LINE L1 27 2832 -4733 1691 190 0 27 chr20 30881228 30881523 -35786482 + AluJo SINE Alu 3 289 -23 13845 157 70 34 chr20 30881523 30881590 -35786415 + L1MA1 LINE L1 2832 2895 -4670 304 277 0 43 chr20 30881602 30881696 -35786309 - L1MC4 LINE L1 -1339 6703 6614 304 239 68 23 chr20 30881642 30881730 -35786275 + L1MC4 LINE L1 6614 6705 -1337 419 168 0 10 chr20 30881732 30881833 -35786172 + (TA)n Simple_repeat Simple_repeat 2 101 0 11603 156 44 21 chr20 30881846 30885490 -35782515 + L1MA1 LINE L1 3987 7717 -4 28 48 0 0 chr20 30885504 30885546 -35782459 + AT_rich Low_complexity Low_complexity 1 42 0 218 212 45 0 chr20 30885632 30885698 -35782307 + A-rich Low_complexity Low_complexity 2 70 0 234 363 60 12 chr20 30886788 30886956 -35781049 - L2 LINE L2 -883 2431 2256 984 118 0 0 chr20 30887143 30887278 -35780727 - AluSg/x SINE Alu -3 309 175 189 0 0 0 chr20 30887685 30887706 -35780299 + (A)n Simple_repeat Simple_repeat 1 21 0 241 340 60 26 chr20 30887714 30887982 -35780023 - L2 LINE L2 -1310 2004 1728 663 338 30 4 chr20 30889064 30889295 -35778710 + MIR SINE MIR 18 254 -8 309 375 86 7 chr20 30889930 30890128 -35777877 - MIR SINE MIR -50 212 3 30 0 0 0 chr20 30890991 30891021 -35776984 + AT_rich Low_complexity Low_complexity 1 30 0 273 344 49 8 chr20 30891334 30891456 -35776549 - MER5B DNA MER1_type -30 148 22 256 373 45 0 chr20 30891742 30891852 -35776153 - L2 LINE L2 0 3313 3199 335 305 0 17 chr20 30892130 30892248 -35775757 + GA-rich Low_complexity Low_complexity 5 120 0 1020 196 10 82 chr20 30892532 30892838 -35775167 - L1MA10 LINE L1 -4 6330 6047 1974 167 8 0 chr20 30892838 30893209 -35774796 + L1 LINE L1 4889 5262 -884 608 62 0 0 chr20 30894494 30894574 -35773431 + L1PA7 LINE L1 6075 6154 0 1676 159 3 21 chr20 30894577 30894904 -35773101 - L1MA7 LINE L1 -185 6106 5786 432 156 135 0 chr20 30894899 30894995 -35773010 + L1MA6 LINE L1 6094 6202 -98 * 2163 239 53 23 chr20 30895005 30896128 -35771877 - L1 LINE L1 -3726 3839 2688 4066 127 9 0 chr20 30896143 30896782 -35771223 - Tigger1 DNA MER2_type -906 1512 868 2491 43 0 0 chr20 30897097 30897401 -35770604 - L1PA5 LINE L1 -5 6149 5846 2324 96 0 10 chr20 30898509 30898822 -35769183 + AluSx SINE Alu 2 311 -1 953 273 104 11 chr20 30899322 30900096 -35767909 - L1ME3A LINE L1 -289 5864 5005 529 288 84 0 chr20 30900153 30900427 -35767578 - L1ME3A LINE L1 -1231 4898 4602 2532 50 0 28 chr20 30900550 30900868 -35767137 - AluSc SINE Alu 0 309 1 484 321 42 18 chr20 30901011 30901391 -35766614 - L1ME3A LINE L1 -2210 3919 3531 417 303 114 53 chr20 30901512 30901984 -35766021 - L1ME3A LINE L1 -2594 3535 3035 398 260 195 5 chr20 30901998 30902198 -35765807 - L1ME4a LINE L1 -11 6110 5873 255 322 56 26 chr20 30902515 30902785 -35765220 - L1MC4 LINE L1 -571 7471 7194 762 266 25 106 chr20 30902828 30903358 -35764647 - L1MC4 LINE L1 -852 7109 6626 555 269 23 23 chr20 30903741 30904001 -35764004 - L1ME3A LINE L1 -3581 2548 2289 1052 276 63 52 chr20 30904163 30904871 -35763134 - L1MEd LINE L1 -4520 1609 910 1791 175 3 3 chr20 30904871 30905168 -35762837 - AluJb SINE Alu -15 297 1 1052 276 63 52 chr20 30905168 30905237 -35762768 - L1MEd LINE L1 -5219 910 843 1963 129 6 38 chr20 30905237 30905554 -35762451 - AluSx SINE Alu -5 307 1 1052 276 63 52 chr20 30905554 30905918 -35762087 - L1MEd LINE L1 -5286 843 455 21 71 0 0 chr20 30907068 30907110 -35760895 + AT_rich Low_complexity Low_complexity 1 42 0 25 0 0 0 chr20 30907392 30907417 -35760588 + AT_rich Low_complexity Low_complexity 1 25 0 313 288 23 5 chr20 30907421 30907623 -35760382 - L1ME LINE L1 -318 5844 5125 250 351 9 18 chr20 30908628 30908739 -35759266 + MIR SINE MIR 26 135 -73 22 0 0 0 chr20 30909727 30909749 -35758256 + AT_rich Low_complexity Low_complexity 1 22 0 964 211 330 18 chr20 30909750 30910296 -35757709 - LTR50 LTR ERVL -63 732 17 1961 218 21 64 chr20 30910889 30911627 -35756378 + L1M4c LINE L1 2329 3027 -3355 2527 47 3 0 chr20 30911640 30911939 -35756066 + AluY SINE Alu 1 300 -11 4030 178 50 3 chr20 30912218 30913066 -35754939 + L1 LINE L1 4268 5158 -1224 1743 133 74 20 chr20 30913066 30913417 -35754588 + L1MA9 LINE L1 5942 6312 0 4030 178 50 3 chr20 30913417 30913431 -35754574 + L1 LINE L1 5158 5170 -1212 185 309 85 32 chr20 30913714 30913808 -35754197 - MIR SINE MIR -70 138 40 24 85 0 0 chr20 30913867 30913926 -35754079 + AT_rich Low_complexity Low_complexity 1 59 0 2233 114 0 0 chr20 30914702 30915000 -35753005 - AluSq SINE Alu -15 298 1 410 226 84 71 chr20 30915546 30915785 -35752220 + LTR16A LTR ERVL 18 324 -126 1816 82 0 0 chr20 30915785 30916004 -35752001 - AluSc SINE Alu -17 292 74 410 226 84 71 chr20 30916004 30916126 -35751879 + LTR16A LTR ERVL 324 443 -7 1322 268 17 0 chr20 30916184 30916479 -35751526 + AluJo SINE Alu 1 300 -12 205 28 0 56 chr20 30916479 30916515 -35751490 + (GGAGAA)n Simple_repeat Simple_repeat 1 34 0 203 133 0 0 chr20 30916520 30916550 -35751455 + (AGGGGG)n Simple_repeat Simple_repeat 3 32 0 828 139 26 11 chr20 30916551 30916906 -35751099 + GA-rich Low_complexity Low_complexity 1 360 0 42301 36 2 2 chr20 30918238 30924385 -35743620 + L1PA3 LINE L1 7 6152 -3 2112 147 0 0 chr20 30926158 30926470 -35741535 + AluSx SINE Alu 1 312 0 2015 81 77 0 chr20 30927702 30927974 -35740031 - AluY SINE Alu -17 294 2 2722 3 0 0 chr20 30928938 30929232 -35738773 + AluY SINE Alu 1 294 -17 38 0 0 0 chr20 30931156 30931194 -35736811 + AT_rich Low_complexity Low_complexity 1 38 0 22 0 0 0 chr20 30931692 30931714 -35736291 + AT_rich Low_complexity Low_complexity 1 22 0 1103 98 5 43 chr20 30932330 30932514 -35735491 + LTR8 LTR ERV1 411 587 -104 2243 119 3 6 chr20 30932694 30933005 -35735000 + AluSq SINE Alu 2 311 -2 10344 155 24 16 chr20 30933181 30935001 -35733004 + L1M1 LINE L1 16 1850 -5715 1669 224 70 6 chr20 30934996 30935479 -35732526 + L1MC3 LINE L1 5872 6385 -1400 * 1157 169 5 0 chr20 30935472 30935667 -35732338 + L1MC3 LINE L1 6627 6822 -963 * 194 380 0 22 chr20 30935815 30935907 -35732098 + L2 LINE L2 2885 2974 -340 938 196 108 31 chr20 30935918 30936178 -35731827 + MLT1F LTR MaLR 259 538 -4 391 231 0 13 chr20 30936781 30936859 -35731146 + MIR SINE MIR 3 79 -183 3775 13 25 7 chr20 30937426 30937875 -35730130 + L1PA2 LINE L1 5696 6152 -3 468 286 48 41 chr20 30938029 30938298 -35729707 + HAL1 LINE L1 1256 1526 -981 674 167 0 0 chr20 30938312 30938414 -35729591 + AluJ/FLAM SINE Alu 1 102 -210 273 288 0 12 chr20 30939106 30939186 -35728819 + MIR3 SINE MIR 96 174 -34 28 48 0 0 chr20 30939279 30939321 -35728684 + AT_rich Low_complexity Low_complexity 1 42 0 355 284 72 64 chr20 30940424 30940709 -35727296 - L1MC4a LINE L1 -1826 5982 5701 351 0 0 0 chr20 30940709 30940748 -35727257 + (TA)n Simple_repeat Simple_repeat 1 39 0 355 284 72 64 chr20 30940748 30940761 -35727244 - L1MC4a LINE L1 -2107 5701 5690 2447 78 0 0 chr20 30940761 30941056 -35726949 - AluY SINE Alu -16 295 1 355 284 72 64 chr20 30941056 30941147 -35726858 - L1MC4a LINE L1 -2118 5690 5589 266 296 69 13 chr20 30941283 30941442 -35726563 + HAL1 LINE L1 1494 1661 -846 469 116 0 0 chr20 30941492 30941561 -35726444 + Alu SINE Alu 235 303 -9 529 307 74 70 chr20 30941561 30941660 -35726345 + L1M4 LINE L1 2324 2421 -3725 1452 190 39 28 chr20 30941660 30941944 -35726061 + AluJb SINE Alu 1 287 -25 529 307 74 70 chr20 30941944 30942385 -35725620 + L1M4 LINE L1 2421 2866 -3280 549 146 11 0 chr20 30942392 30942481 -35725524 + 5S rRNA rRNA 1 90 -31 364 275 44 25 chr20 30942523 30942683 -35725322 - MLT1H LTR MaLR -386 163 1 261 244 204 47 chr20 30942683 30942855 -35725150 + L1ME3A LINE L1 5956 6154 -16 5923 145 19 9 chr20 30943468 30945119 -35722886 + L1MA6 LINE L1 4640 6300 0 810 202 24 12 chr20 30945192 30945360 -35722645 + MER5A DNA MER1_type 17 186 -3 696 168 19 25 chr20 30945444 30945605 -35722400 - L1MA10 LINE L1 0 6334 6175 2175 112 26 0 chr20 30945730 30946034 -35721971 + AluSx SINE Alu 1 312 0 2203 49 4 4 chr20 30946904 30947171 -35720834 + AluY SINE Alu 2 268 -43 222 37 0 0 chr20 30947177 30947204 -35720801 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 23 0 0 0 chr20 30947411 30947434 -35720571 + AT_rich Low_complexity Low_complexity 1 23 0 247 143 0 0 chr20 30947483 30947525 -35720480 + L1ME1 LINE L1 3812 3853 -2293 3636 86 25 23 chr20 30947525 30948095 -35719910 + L1MA8 LINE L1 5702 6272 -19 3736 88 31 23 chr20 30947532 30948108 -35719897 + L1MA8 LINE L1 5709 6289 -2 331 194 125 0 chr20 30948150 30948222 -35719783 + AluJb SINE Alu 43 123 -179 2713 223 64 33 chr20 30948236 30948603 -35719402 + L1ME1 LINE L1 3840 4194 -1952 2023 130 0 3 chr20 30948603 30948917 -35719088 + AluY SINE Alu 1 311 0 2713 223 64 33 chr20 30948917 30949375 -35718630 + L1ME1 LINE L1 4194 4691 -1455 227 160 0 120 chr20 30949376 30949430 -35718575 + L1ME1 LINE L1 5380 5424 -2361 2274 110 3 0 chr20 30949430 30949730 -35718275 + AluSx SINE Alu 1 301 -11 227 160 0 120 chr20 30949730 30949750 -35718255 + L1ME1 LINE L1 5424 5445 -2340 2096 99 55 39 chr20 30949750 30950113 -35717892 - THE1C LTR MaLR 0 375 7 2783 97 5 10 chr20 30950117 30950500 -35717505 - THE1C-int LTR MaLR -4 1576 1196 2562 53 0 3 chr20 30950501 30950802 -35717203 + AluY SINE Alu 1 300 -11 2395 194 59 83 chr20 30950828 30951571 -35716434 + L1ME1 LINE L1 5437 6161 -5 340 95 10 0 chr20 30951583 30951641 -35716364 + AluSx SINE Alu 1 42 -261 1879 127 0 8 chr20 30951755 30952023 -35715982 + AluSx SINE Alu 41 306 -6 180 0 0 0 chr20 30952225 30952245 -35715760 + (T)n Simple_repeat Simple_repeat 1 20 0 182 351 32 0 chr20 30952518 30952612 -35715393 - L3 LINE CR1 -100 1477 1381 1876 148 13 26 chr20 30952637 30952948 -35715057 + AluJo SINE Alu 1 307 -5 1309 98 16 22 chr20 30953353 30953536 -35714469 - AluSg/x SINE Alu -13 299 118 278 304 172 49 chr20 30953680 30953884 -35714121 - L2 LINE L2 -2 3270 3042 2441 95 0 3 chr20 30954908 30955212 -35712793 - AluSx SINE Alu -9 303 1 227 279 140 39 chr20 30955224 30955453 -35712552 - L1MC/D LINE L1 -1925 5883 5632 1843 136 0 0 chr20 30956268 30956533 -35711472 - AluSx SINE Alu -7 305 41 422 305 159 11 chr20 30956595 30956907 -35711098 + L2 LINE L2 2782 3137 -176 1331 120 11 0 chr20 30956984 30957175 -35710830 - AluSg/x SINE Alu -1 309 117 3683 84 4 2 chr20 30957214 30957699 -35710306 - L1PB3 LINE L1 0 6154 5669 2337 84 3 0 chr20 30957792 30958078 -35709927 + AluSc SINE Alu 1 287 -22 905 293 79 8 chr20 30959437 30959955 -35708050 - HERVL LTR ERVL -1504 3981 3420 470 284 93 93 chr20 30959962 30960660 -35707345 - L1MEd LINE L1 -5270 849 149 2384 104 0 0 chr20 30960660 30960968 -35707037 - AluSg SINE Alu 0 310 3 470 284 93 93 chr20 30960968 30961074 -35706931 - L1MEd LINE L1 -5969 150 45 188 273 91 37 chr20 30961650 30961837 -35706168 - L2 LINE L2 -1216 2098 1902 214 287 52 52 chr20 30961988 30962124 -35705881 - L2 LINE L2 -1406 1908 1773 186 343 40 0 chr20 30962325 30962424 -35705581 - L3 LINE CR1 -153 1424 1322 2660 236 77 88 chr20 30963082 30963161 -35704844 + L1MDa LINE L1 18 96 -6444 219 69 0 0 chr20 30963161 30963190 -35704815 + (TG)n Simple_repeat Simple_repeat 2 30 0 2660 236 77 88 chr20 30963190 30964072 -35703933 + L1MDa LINE L1 96 1130 -5410 616 226 67 5 chr20 30964074 30964263 -35703742 - L1MD2 LINE L1 -322 5829 5660 2052 100 4 0 chr20 30964464 30964725 -35703280 - AluSx SINE Alu -15 297 36 1177 123 31 0 chr20 30964828 30965023 -35702982 - L1MD2 LINE L1 -873 5486 5286 1121 138 6 0 chr20 30965024 30965183 -35702822 - AluSc SINE Alu -18 291 132 2344 92 0 7 chr20 30965183 30965486 -35702519 - AluY SINE Alu -9 302 2 3809 214 32 63 chr20 30965489 30965797 -35702208 - L1MD2 LINE L1 -850 5296 4980 1761 169 7 7 chr20 30965797 30966087 -35701918 - AluJo SINE Alu -21 291 2 3809 214 32 63 chr20 30966087 30966982 -35701023 - L1MD2 LINE L1 -1166 4980 4130 1698 180 154 66 chr20 30966983 30967054 -35700951 + L1MD2 LINE L1 5803 5866 -493 2033 124 10 0 chr20 30967054 30967344 -35700661 + AluJb SINE Alu 1 293 -19 1698 180 154 66 chr20 30967344 30967771 -35700234 + L1MD2 LINE L1 5866 6345 -14 499 277 60 24 chr20 30967799 30968048 -35699957 + MIR SINE MIR 5 262 0 199 294 35 35 chr20 30968248 30968333 -35699672 - L2 LINE L2 -2 3270 3186 2316 124 16 53 chr20 30968625 30968786 -35699219 + THE1B LTR MaLR 1 166 -198 2057 121 38 3 chr20 30968786 30969076 -35698929 + AluSx SINE Alu 3 302 -10 2194 72 3 31 chr20 30969076 30969394 -35698611 + AluY SINE Alu 1 310 0 2316 124 16 53 chr20 30969394 30969608 -35698397 + THE1B LTR MaLR 164 364 0 1658 138 4 0 chr20 30969696 30969965 -35698040 + L1MA3 LINE L1 6036 6305 0 232 178 0 0 chr20 30970870 30970915 -35697090 + A-rich Low_complexity Low_complexity 1 45 0 412 213 148 0 chr20 30970919 30971041 -35696964 + MIR SINE MIR 52 191 -71 1925 152 0 10 chr20 30971107 30971404 -35696601 + AluJb SINE Alu 1 294 -18 3264 113 23 49 chr20 30971935 30972324 -35695681 + L1MA5 LINE L1 5738 6109 -191 2304 75 30 7 chr20 30972324 30972629 -35695376 - AluSx SINE Alu 0 312 1 3264 113 23 49 chr20 30972629 30972815 -35695190 + L1MA5 LINE L1 6109 6298 -2 1073 250 35 41 chr20 30972859 30973418 -35694587 - MER115 DNA AcHobo 0 693 73 392 244 82 0 chr20 30973845 30973980 -35694025 - MIR SINE MIR -55 207 62 239 234 39 13 chr20 30973981 30974058 -35693947 + (TGAA)n Simple_repeat Simple_repeat 3 81 0 270 206 29 15 chr20 30975312 30975339 -35692666 + (CCCCAG)n Simple_repeat Simple_repeat 1 26 -168 218 31 0 31 chr20 30975339 30975371 -35692634 + (CTAAT)n Simple_repeat Simple_repeat 1 31 0 270 206 29 15 chr20 30975371 30975504 -35692501 + (CCCCAG)n Simple_repeat Simple_repeat 26 194 0 22 94 0 0 chr20 30976548 30976612 -35691393 + AT_rich Low_complexity Low_complexity 1 64 0 2162 103 40 13 chr20 30976614 30976915 -35691090 + AluSg SINE Alu 1 309 -1 451 323 52 10 chr20 30977013 30977304 -35690701 + L2 LINE L2 2900 3202 -111 1167 252 58 60 chr20 30977362 30977662 -35690343 - MLT1J LTR MaLR -20 470 193 1861 130 7 46 chr20 30977662 30977969 -35690036 + AluSx SINE Alu 1 295 -17 1167 252 58 60 chr20 30977969 30978162 -35689843 - MLT1J LTR MaLR -297 193 1 30 0 0 0 chr20 30978168 30978198 -35689807 + AT_rich Low_complexity Low_complexity 1 30 0 980 173 40 35 chr20 30978304 30978506 -35689499 + AluJo SINE Alu 22 224 -88 552 303 98 52 chr20 30978522 30978889 -35689116 + LTR67 LTR ERVL 114 497 -60 375 226 219 0 chr20 30978911 30979057 -35688948 + MIR SINE MIR 85 262 0 626 180 63 79 chr20 30979708 30979739 -35688266 + MIR SINE MIR 77 107 -155 1980 153 3 3 chr20 30979739 30980034 -35687971 + AluSx SINE Alu 1 295 -17 626 180 63 79 chr20 30980034 30980191 -35687814 + MIR SINE MIR 107 262 0 266 290 19 25 chr20 30980405 30980567 -35687438 + (TATATG)n Simple_repeat Simple_repeat 4 164 0 351 44 0 0 chr20 30981817 30981862 -35686143 + (TG)n Simple_repeat Simple_repeat 1 45 0 2431 100 0 3 chr20 30981877 30982188 -35685817 - AluSq SINE Alu -3 310 1 2175 48 4 11 chr20 30982528 30982800 -35685205 - L1PA8 LINE L1 -3 6169 5900 225 0 0 0 chr20 30982905 30982930 -35685075 + (CA)n Simple_repeat Simple_repeat 1 25 0 2217 109 0 7 chr20 30983196 30983498 -35684507 - AluSx SINE Alu -12 300 1 1884 148 0 21 chr20 30983568 30983758 -35684247 - AluSx SINE Alu 0 323 140 2455 82 16 0 chr20 30983758 30984062 -35683943 - AluSg SINE Alu -1 309 1 1884 148 0 21 chr20 30984062 30984195 -35683810 - AluSx SINE Alu -183 140 6 23 0 0 0 chr20 30984295 30984318 -35683687 + AT_rich Low_complexity Low_complexity 1 23 0 296 288 91 23 chr20 30984443 30984575 -35683430 - L2 LINE L2 -2 3311 3171 465 200 0 0 chr20 30984691 30984776 -35683229 + MER96 DNA MER1_type? 91 175 0 270 273 249 36 chr20 30984965 30985302 -35682703 + LTR67 LTR ERVL 99 507 -50 2244 122 0 3 chr20 30985705 30986016 -35681989 - AluSx SINE Alu -2 310 1 2293 293 136 46 chr20 30986489 30988458 -35679547 - L2 LINE L2 0 3313 1116 1691 163 13 43 chr20 30988458 30988759 -35679246 + AluJo SINE Alu 1 292 -20 2293 293 136 46 chr20 30988759 30988934 -35679071 - L2 LINE L2 -2197 1116 958 581 317 25 9 chr20 30989090 30989318 -35678687 - MIR SINE MIR -11 251 21 1027 185 35 10 chr20 30989911 30990111 -35677894 - MER3 DNA MER1_type -4 205 1 294 29 0 0 chr20 30990266 30990301 -35677704 + (CA)n Simple_repeat Simple_repeat 2 36 0 980 187 12 0 chr20 30992316 30992487 -35675518 - FRAM SINE Alu -4 172 1 708 290 64 40 chr20 30992506 30992517 -35675488 + MLT1H LTR MaLR 3 12 -537 2014 95 0 11 chr20 30992517 30992790 -35675215 + AluY SINE Alu 30 299 -12 708 290 64 40 chr20 30992790 30993075 -35674930 + MLT1H LTR MaLR 12 306 -243 394 192 0 13 chr20 30993150 30993228 -35674777 + MLT1H LTR MaLR 473 549 0 2334 107 0 3 chr20 30993293 30993601 -35674404 - AluSx SINE Alu -5 307 1 1479 186 16 29 chr20 30993684 30993996 -35674009 + AluJo SINE Alu 1 308 -4 1057 171 92 13 chr20 30994036 30994264 -35673741 - MER58B DNA MER1_type -13 328 83 2222 125 0 0 chr20 30994266 30994561 -35673444 + AluSq SINE Alu 1 295 -18 414 171 0 95 chr20 30994565 30994670 -35673335 + FLAM_C SINE Alu 47 141 -2 1963 182 126 51 chr20 30994691 30994981 -35673024 + L1ME1 LINE L1 5552 5819 -515 2297 101 0 19 chr20 30994981 30995289 -35672716 + AluSq SINE Alu 1 302 -11 1963 182 126 51 chr20 30995289 30995587 -35672418 + L1ME1 LINE L1 5819 6334 0 2042 140 4 3 chr20 30995664 30995999 -35672006 + L1PA16 LINE L1 5775 6112 -56 330 26 0 0 chr20 30996346 30996385 -35671620 + (GA)n Simple_repeat Simple_repeat 1 39 0 862 277 11 9 chr20 30997864 30998125 -35669880 + MIR SINE MIR 3 262 0 1042 274 40 37 chr20 30998942 30999318 -35668687 - MLT1I LTR MaLR -4 405 29 762 133 23 0 chr20 30999320 30999448 -35668557 + L1MB1 LINE L1 5477 5607 -561 2165 130 10 0 chr20 30999448 30999756 -35668249 + AluSp SINE Alu 1 311 -2 349 71 48 48 chr20 30999759 30999843 -35668162 + GA-rich Low_complexity Low_complexity 4 87 0 2897 164 18 36 chr20 30999847 31000291 -35667714 + L1MB1 LINE L1 5616 6049 -119 1914 118 3 64 chr20 31000291 31000605 -35667400 + AluJo SINE Alu 1 295 -17 2897 164 18 36 chr20 31000605 31000722 -35667283 + L1MB1 LINE L1 6049 6167 -1 2207 114 0 0 chr20 31000770 31001067 -35666938 - AluSx SINE Alu -10 302 6 21 0 0 0 chr20 31001164 31001185 -35666820 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr20 31001577 31001600 -35666405 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2182 117 0 0 chr20 31001602 31001883 -35666122 - AluSx SINE Alu -31 281 1 684 326 92 6 chr20 31002046 31002393 -35665612 - L3 LINE CR1 -11 1566 1190 2108 142 3 0 chr20 31002586 31002889 -35665116 + AluSx SINE Alu 1 304 -8 1057 210 50 86 chr20 31002898 31003203 -35664802 + HAL1 LINE L1 1092 1407 -1100 2326 111 0 0 chr20 31003203 31003501 -35664504 + AluSq SINE Alu 1 298 -15 2929 6 0 0 chr20 31003501 31003812 -35664193 + AluYa5 SINE Alu 1 311 0 1057 210 50 86 chr20 31003812 31003947 -35664058 + HAL1 LINE L1 1405 1517 -990 1439 182 141 23 chr20 31003954 31004301 -35663704 + MER66A LTR ERV1 27 414 -64 959 272 160 13 chr20 31004322 31004715 -35663290 + HAL1 LINE L1 1514 1964 -543 553 190 37 163 chr20 31004722 31005017 -35662988 + HAL1 LINE L1 2246 2503 -4 1491 164 45 42 chr20 31005116 31005428 -35662577 + THE1C LTR MaLR 63 375 0 2597 164 9 2 chr20 31005428 31005873 -35662132 + L1MA9 LINE L1 5639 6086 -226 1286 152 56 128 chr20 31005884 31006258 -35661747 - MLT1A1 LTR MaLR -12 353 7 1482 111 12 25 chr20 31006258 31006501 -35661504 + L1MA9 LINE L1 6073 6312 0 1648 171 58 0 chr20 31006550 31006843 -35661162 + AluJo SINE Alu 3 312 0 1413 235 41 78 chr20 31007808 31008463 -35659542 + L1MC5 LINE L1 6572 7146 -815 338 293 20 33 chr20 31008463 31008613 -35659392 + L2 LINE L2 2966 3113 -200 338 238 172 16 chr20 31008609 31008659 -35659346 + L2 LINE L2 3173 3214 -99 195 100 0 0 chr20 31008659 31008689 -35659316 + (TTGG)n Simple_repeat Simple_repeat 2 31 0 338 238 172 16 chr20 31008689 31008760 -35659245 + L2 LINE L2 3214 3313 0 204 330 36 18 chr20 31009086 31009198 -35658807 - MIR SINE MIR -110 152 39 284 277 43 35 chr20 31009671 31009812 -35658193 + L2 LINE L2 2677 2818 -496 442 275 58 0 chr20 31010051 31010189 -35657816 + MIR3 SINE MIR 59 204 -4 9561 22 0 249 chr20 31011789 31013634 -35654371 + SVA Other Other 1 1386 0 28 79 0 0 chr20 31014092 31014155 -35653850 + AT_rich Low_complexity Low_complexity 1 63 0 1979 169 47 38 chr20 31014169 31014412 -35653593 - MLT1C LTR MaLR -36 431 181 2314 119 0 0 chr20 31014412 31014722 -35653283 - AluSx SINE Alu -2 310 1 1979 169 47 38 chr20 31014722 31014905 -35653100 - MLT1C LTR MaLR -286 181 1 451 181 11 0 chr20 31014919 31015013 -35652992 - L1M LINE L1 -2396 5412 5318 1089 235 50 62 chr20 31015020 31015522 -35652483 - HAL1 LINE L1 -1220 1287 792 1730 270 102 63 chr20 31015531 31015599 -35652406 - HAL1 LINE L1 -1596 911 847 1820 150 39 7 chr20 31015599 31015912 -35652093 - AluSx SINE Alu 0 312 1 1730 270 102 63 chr20 31015912 31016720 -35651285 - HAL1 LINE L1 -1660 847 1 2289 87 0 10 chr20 31016779 31017068 -35650937 + AluSx SINE Alu 1 286 -26 194 0 0 37 chr20 31017068 31017095 -35650910 + (TTAAA)n Simple_repeat Simple_repeat 2 27 0 591 320 54 0 chr20 31017136 31017395 -35650610 - L1M4 LINE L1 -2275 3871 3599 23 0 0 0 chr20 31017531 31017554 -35650451 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr20 31017712 31017740 -35650265 + AT_rich Low_complexity Low_complexity 1 28 0 766 318 0 5 chr20 31017788 31018011 -35649994 + L1MEc LINE L1 36 257 -6139 1296 220 104 64 chr20 31018406 31018774 -35649231 + MLT1E LTR MaLR 1 388 -205 2600 58 3 0 chr20 31018774 31019083 -35648922 + AluY SINE Alu 1 310 -1 1296 220 104 64 chr20 31019083 31019119 -35648886 + MLT1E LTR MaLR 388 421 -172 2222 87 4 0 chr20 31019608 31019885 -35648120 + AluSp SINE Alu 1 278 -35 234 0 0 0 chr20 31019889 31019915 -35648090 + (TAAA)n Simple_repeat Simple_repeat 1 26 0 2103 98 11 11 chr20 31019996 31020282 -35647723 + AluSx SINE Alu 6 291 -21 365 325 71 35 chr20 31020694 31020891 -35647114 - MLT1J LTR MaLR -177 334 131 371 266 58 36 chr20 31020894 31021033 -35646972 + L2 LINE L2 2184 2325 -989 1211 224 133 85 chr20 31021037 31021066 -35646939 + MLT1G LTR MaLR 1 27 -563 2179 118 3 0 chr20 31021066 31021362 -35646643 + AluSx SINE Alu 1 297 -15 1211 224 133 85 chr20 31021362 31021730 -35646275 + MLT1G LTR MaLR 27 452 -138 363 302 74 30 chr20 31021818 31022020 -35645985 - MIR SINE MIR -37 225 15 731 295 24 8 chr20 31022079 31022330 -35645675 - L2 LINE L2 -255 3058 2804 1933 117 3 54 chr20 31022440 31022738 -35645267 + AluSx SINE Alu 6 288 -24 36 0 0 0 chr20 31022738 31022774 -35645231 + AT_rich Low_complexity Low_complexity 1 36 0 354 327 0 9 chr20 31022824 31022931 -35645074 - MLT1K LTR MaLR -465 123 18 292 259 76 118 chr20 31022946 31023117 -35644888 - L1ME LINE L1 -479 5642 5465 1852 121 0 71 chr20 31023117 31023248 -35644757 + AluSx SINE Alu 7 107 -205 2321 112 0 0 chr20 31023248 31023551 -35644454 - AluSx SINE Alu -9 303 1 1852 121 0 71 chr20 31023551 31023716 -35644289 + AluSx SINE Alu 107 282 -30 189 0 0 0 chr20 31023722 31023743 -35644262 + (TA)n Simple_repeat Simple_repeat 1 21 0 292 259 76 118 chr20 31023743 31023826 -35644179 - L1ME LINE L1 -661 5460 5392 276 284 73 46 chr20 31024308 31024417 -35643588 - MIR3 SINE MIR -47 161 50 237 146 0 18 chr20 31024533 31024588 -35643417 + Alu SINE Alu 249 302 0 198 0 0 0 chr20 31024840 31024862 -35643143 + (TTG)n Simple_repeat Simple_repeat 2 23 0 388 250 56 56 chr20 31024924 31024993 -35643012 - LTR50 LTR ERVL -151 644 576 2241 99 17 0 chr20 31024993 31025286 -35642719 - AluSx SINE Alu -14 298 1 388 250 56 56 chr20 31025286 31025360 -35642645 - LTR50 LTR ERVL -218 577 501 385 265 118 70 chr20 31026346 31026701 -35641304 - L2 LINE L2 -35 3237 2866 190 358 37 0 chr20 31027002 31027111 -35640894 + MIR SINE MIR 39 151 -111 690 285 76 50 chr20 31027548 31027791 -35640214 - L2 LINE L2 -5 3308 3050 2013 135 3 26 chr20 31027791 31028102 -35639903 - AluSx SINE Alu -8 304 1 690 285 76 50 chr20 31028102 31028240 -35639765 - L2 LINE L2 -263 3050 2917 206 304 88 20 chr20 31029550 31029652 -35638353 + L2 LINE L2 3110 3218 -54 351 266 60 49 chr20 31029919 31030103 -35637902 - L1ME3A LINE L1 -43 6127 5942 1684 231 34 92 chr20 31030166 31030734 -35637271 - L1MC5 LINE L1 -431 7530 7015 2280 103 3 3 chr20 31030734 31031035 -35636970 - AluSx SINE Alu -11 301 1 1684 231 34 92 chr20 31031035 31031224 -35636781 - L1MC5 LINE L1 -946 7015 6817 1606 237 37 51 chr20 31031238 31031728 -35636277 - LTR65 LTR ERV1 -20 649 167 334 233 0 35 chr20 31031756 31031842 -35636163 - L1MC5 LINE L1 -1120 6841 6759 * 785 214 59 32 chr20 31031841 31032061 -35635944 - L1MEc LINE L1 -4329 2067 1842 743 111 0 0 chr20 31032063 31032171 -35635834 + AluY SINE Alu 204 311 0 2479 74 7 0 chr20 31032175 31032484 -35635521 + AluSp SINE Alu 1 311 -2 2910 266 55 44 chr20 31032484 31032811 -35635194 - L1MEc LINE L1 -4546 1850 1528 1908 139 34 7 chr20 31032811 31032975 -35635030 - AluJb SINE Alu -10 302 125 2616 59 0 0 chr20 31032975 31033280 -35634725 - AluY SINE Alu -6 305 1 1908 139 34 7 chr20 31033280 31033409 -35634596 - AluJb SINE Alu -187 125 1 2910 266 55 44 chr20 31033409 31033910 -35634095 - L1MEc LINE L1 -4868 1528 1034 2272 90 0 51 chr20 31033910 31034222 -35633783 - AluSp SINE Alu -17 296 1 2910 266 55 44 chr20 31034222 31034787 -35633218 - L1MEc LINE L1 -5362 1034 442 903 181 12 12 chr20 31034816 31034987 -35633018 + AluSg/x SINE Alu 137 307 -5 1720 232 40 34 chr20 31035471 31035549 -35632456 + Charlie1 DNA MER1_type 24 100 -2661 1948 70 0 74 chr20 31035549 31035720 -35632285 - AluY SINE Alu -9 302 159 414 0 0 0 chr20 31035720 31035766 -35632239 + (TA)n Simple_repeat Simple_repeat 2 47 0 1948 70 0 74 chr20 31035766 31035879 -35632126 - AluY SINE Alu -152 159 39 1720 232 40 34 chr20 31035879 31036244 -35631761 + Charlie1 DNA MER1_type 100 470 -2291 664 153 127 0 chr20 31036247 31036365 -35631640 - AluJo SINE Alu -175 137 5 543 261 42 61 chr20 31036404 31036592 -35631413 + L1MCc LINE L1 1226 1407 -5016 2497 120 57 47 chr20 31036592 31036935 -35631070 + MSTA LTR MaLR 1 350 -78 2283 105 0 3 chr20 31036935 31037231 -35630774 - AluSx SINE Alu -17 295 1 2497 120 57 47 chr20 31037231 31037311 -35630694 + MSTA LTR MaLR 350 428 0 543 261 42 61 chr20 31037311 31037432 -35630573 + L1MCc LINE L1 1407 1529 -4894 341 209 2 20 chr20 31037439 31037528 -35630477 - MLT1H LTR MaLR 0 567 462 265 213 0 0 chr20 31037653 31037700 -35630305 - AluY SINE Alu -253 47 1 298 215 13 63 chr20 31037881 31037960 -35630045 - MLT1F LTR MaLR -439 103 29 1116 150 0 17 chr20 31038036 31038209 -35629796 + FAM SINE Alu 1 170 -5 487 265 42 32 chr20 31038212 31038401 -35629604 + L1MCc LINE L1 1760 1950 -4981 736 186 0 0 chr20 31038409 31038527 -35629478 + AluJo/FLAM SINE Alu 1 118 -184 654 175 75 8 chr20 31038527 31038647 -35629358 - AluJo/FLAM SINE Alu -170 132 5 426 200 29 102 chr20 31038669 31038814 -35629191 + L1MCc LINE L1 1981 2108 -5014 2160 112 10 3 chr20 31038814 31039119 -35628886 + AluSx SINE Alu 2 308 -4 426 200 29 102 chr20 31039119 31039178 -35628827 + L1MCc LINE L1 2108 2170 -4952 1010 63 0 0 chr20 31039181 31039308 -35628697 + AluY SINE Alu 172 298 -13 403 280 16 11 chr20 31039317 31039506 -35628499 + L1M4 LINE L1 4409 4598 -1548 2284 66 0 87 chr20 31040029 31040361 -35627644 - AluY SINE Alu -8 303 1 1727 174 3 11 chr20 31040510 31040792 -35627213 - AluJb SINE Alu -22 290 11 669 224 20 0 chr20 31040797 31040949 -35627056 - L1MA10 LINE L1 -10 6324 6170 2162 96 43 10 chr20 31040966 31041269 -35626736 - AluSq SINE Alu 0 313 1 880 288 30 43 chr20 31041274 31041549 -35626456 + L2 LINE L2 2820 3090 -223 2572 52 0 3 chr20 31041549 31041854 -35626151 + AluY SINE Alu 1 304 -7 880 288 30 43 chr20 31041854 31041950 -35626055 + L2 LINE L2 3090 3186 -127 180 182 0 0 chr20 31042051 31042095 -35625910 + (TA)n Simple_repeat Simple_repeat 2 45 0 326 230 27 0 chr20 31042180 31042254 -35625751 + LTR33A LTR ERVL 448 523 0 231 206 59 15 chr20 31042338 31042406 -35625599 - L2 LINE L2 0 3272 3202 243 0 0 0 chr20 31042522 31042549 -35625456 + (TCCCC)n Simple_repeat Simple_repeat 2 28 0 390 250 57 57 chr20 31042550 31042690 -35625315 - LTR50 LTR ERVL -628 167 28 1018 155 0 7 chr20 31042856 31043011 -35624994 - AluJo SINE Alu -81 231 78 1834 157 0 43 chr20 31043141 31043466 -35624539 + AluJo SINE Alu 1 311 -1 728 120 64 0 chr20 31043474 31043599 -35624406 + L1MA5 LINE L1 6151 6283 -17 24 0 0 0 chr20 31043606 31043630 -35624375 + AT_rich Low_complexity Low_complexity 1 24 0 721 225 0 0 chr20 31043630 31043820 -35624185 + FLAM_A SINE Alu 1 190 0 1753 153 73 0 chr20 31044311 31044586 -35623419 - AluJb SINE Alu -17 295 1 516 235 10 0 chr20 31045180 31045282 -35622723 + L2 LINE L2 3191 3293 -20 1038 183 36 40 chr20 31045282 31045533 -35622472 + Tigger8 DNA MER2_type 261 510 -156 2205 90 3 0 chr20 31045534 31045834 -35622171 + AluSx SINE Alu 1 301 -11 2202 204 88 13 chr20 31046087 31046367 -35621638 - L1ME2 LINE L1 -213 5951 5694 2007 117 3 11 chr20 31046367 31046686 -35621319 - AluSx SINE Alu 0 317 1 2202 204 88 13 chr20 31046686 31047073 -35620932 - L1ME2 LINE L1 -470 5694 5224 192 97 0 0 chr20 31047650 31047681 -35620324 + (TA)n Simple_repeat Simple_repeat 1 31 0 2496 91 3 0 chr20 31047766 31048095 -35619910 - AluSx SINE Alu 0 330 1 2486 84 3 0 chr20 31048320 31048631 -35619374 - AluSx SINE Alu 0 312 1 346 218 82 9 chr20 31048637 31048747 -35619258 + L1ME4a LINE L1 6004 6121 0 2043 134 7 0 chr20 31048787 31049070 -35618935 + AluJo SINE Alu 6 290 -22 235 279 13 38 chr20 31049114 31049193 -35618812 + MIR SINE MIR 56 132 -130 637 151 57 0 chr20 31049210 31049316 -35618689 + AluJo SINE Alu 2 113 -199 181 0 69 0 chr20 31049320 31049349 -35618656 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 917 159 35 75 chr20 31049356 31049557 -35618448 + AluJo SINE Alu 100 292 -20 504 105 0 0 chr20 31049570 31049646 -35618359 + (GGAA)n Simple_repeat Simple_repeat 4 79 0 241 258 103 0 chr20 31049789 31049886 -35618119 - L3 LINE CR1 -50 1527 1421 251 299 23 11 chr20 31049923 31050010 -35617995 + MIR SINE MIR 52 139 -69 336 277 79 0 chr20 31050426 31050527 -35617478 - MIR SINE MIR -103 159 51 2246 117 0 0 chr20 31051069 31051368 -35616637 + AluSx SINE Alu 1 299 -13 453 230 0 174 chr20 31051415 31051512 -35616493 - MIR SINE MIR -79 183 135 2229 110 0 0 chr20 31051512 31051802 -35616203 + AluSx SINE Alu 1 290 -22 453 230 0 174 chr20 31051802 31051900 -35616105 - MIR SINE MIR -127 135 22 317 250 31 10 chr20 31052085 31052181 -35615824 - L2 LINE L2 -58 3255 3158 367 227 357 27 chr20 31052582 31052767 -35615238 + MIR SINE MIR 4 249 -13 271 293 12 0 chr20 31052849 31052931 -35615074 - MIR SINE MIR -93 115 33 1970 169 0 3 chr20 31052953 31053248 -35614757 - AluJo SINE Alu -18 294 1 553 261 113 20 chr20 31053321 31053524 -35614481 + L2 LINE L2 2804 3025 -288 385 206 83 67 chr20 31053529 31053659 -35614346 + L1MC5 LINE L1 7734 7869 -92 2551 71 0 3 chr20 31053659 31053969 -35614036 - AluSc SINE Alu 0 309 1 385 206 83 67 chr20 31053969 31054018 -35613987 + L1MC5 LINE L1 7869 7916 -45 849 133 8 0 chr20 31054037 31054157 -35613848 + AluJo SINE Alu 14 134 -178 2185 118 27 0 chr20 31054335 31054632 -35613373 + AluSq SINE Alu 1 305 -8 6826 69 12 42 chr20 31054640 31055623 -35612382 - SVA Other Other 0 1386 433 944 109 32 106 chr20 31055640 31056367 -35611638 - SVA Other Other -520 866 519 1267 49 8 65 chr20 31056395 31056641 -35611364 - SVA Other Other -520 866 635 6093 55 19 52 chr20 31056674 31057648 -35610357 - SVA Other Other -520 866 1 377 277 30 60 chr20 31057886 31058052 -35609953 - MIR SINE MIR -58 204 44 207 162 0 0 chr20 31058102 31058139 -35609866 + (CA)n Simple_repeat Simple_repeat 1 37 0 371 212 30 10 chr20 31058529 31058628 -35609377 + MIR SINE MIR 44 144 -64 185 188 0 200 chr20 31058677 31058760 -35609245 + MIR SINE MIR 133 198 -64 436 194 41 10 chr20 31058760 31058858 -35609147 + MER5A DNA MER1_type 1 101 -88 413 180 10 16 chr20 31059002 31059092 -35608913 + MER5A DNA MER1_type 86 189 0 226 229 0 0 chr20 31059092 31059138 -35608867 + MIR SINE MIR 191 236 -26 424 206 40 56 chr20 31059339 31059465 -35608540 - MIR3 SINE MIR -52 156 33 451 285 44 25 chr20 31060021 31060179 -35607826 + MER5A DNA MER1_type 1 161 -28 541 192 31 62 chr20 31062044 31062174 -35605831 + MER91C DNA MER1_type 1 126 -14 263 269 13 13 chr20 31062676 31062754 -35605251 - MIR SINE MIR -69 139 62 298 119 90 30 chr20 31062797 31062864 -35605141 - L2 LINE L2 -1 3312 3242 406 331 6 6 chr20 31063409 31063566 -35604439 + MIR SINE MIR 20 176 -86 235 317 19 10 chr20 31063897 31064001 -35604004 - MIR SINE MIR -110 152 48 2526 88 0 0 chr20 31064023 31064329 -35603676 - AluSq SINE Alu -7 306 1 386 303 101 0 chr20 31064441 31064560 -35603445 - L2 LINE L2 0 3272 3142 183 352 117 23 chr20 31064658 31064786 -35603219 + MIR3 SINE MIR 19 158 -50 2414 106 3 0 chr20 31065002 31065313 -35602692 + AluSp SINE Alu 1 312 -1 253 128 0 0 chr20 31065347 31065386 -35602619 + Alu SINE Alu 251 289 -12 316 348 0 22 chr20 31065386 31065475 -35602530 + L1MC4 LINE L1 6617 6703 -1339 2382 107 3 0 chr20 31065508 31065817 -35602188 - AluSx SINE Alu -2 310 1 210 266 62 16 chr20 31065944 31066008 -35601997 - MIR3 SINE MIR -49 159 93 2246 118 3 3 chr20 31066185 31066491 -35601514 + AluSx SINE Alu 1 306 -6 203 286 44 11 chr20 31066494 31066585 -35601420 + L2 LINE L2 2884 2977 -337 188 259 130 0 chr20 31066754 31066808 -35601197 + L2 LINE L2 3141 3201 -71 303 301 48 0 chr20 31067247 31067350 -35600655 - MIR SINE MIR -89 173 66 861 144 0 15 chr20 31068049 31068181 -35599824 + AluJo SINE Alu 5 134 -178 2196 132 0 0 chr20 31068212 31068507 -35599498 + AluSx SINE Alu 1 295 -17 180 0 0 0 chr20 31068969 31068989 -35599016 + (A)n Simple_repeat Simple_repeat 1 20 0 585 209 30 8 chr20 31068991 31069125 -35598880 + MER5A DNA MER1_type 32 168 -21 367 289 32 19 chr20 31070265 31070421 -35597584 - MIR SINE MIR -72 190 33 265 260 94 10 chr20 31070561 31070657 -35597348 - MIR3 SINE MIR -27 181 78 465 209 46 39 chr20 31071333 31071486 -35596519 - L2 LINE L2 -1 3312 3159 240 204 31 112 chr20 31071487 31071585 -35596420 - MIR3 SINE MIR 0 208 119 624 14 0 0 chr20 31071587 31071660 -35596345 + (GA)n Simple_repeat Simple_repeat 1 73 0 498 306 20 0 chr20 31071871 31072018 -35595987 + MIR SINE MIR 107 256 -6 1695 164 0 29 chr20 31072055 31072335 -35595670 - AluJb SINE Alu -31 281 10 592 216 96 6 chr20 31072419 31072586 -35595419 + L2 LINE L2 3132 3313 0 299 318 73 47 chr20 31072775 31072967 -35595038 - MIR SINE MIR 0 262 66 206 280 0 0 chr20 31073004 31073054 -35594951 - MIR SINE MIR -67 141 92 635 225 62 70 chr20 31073067 31073294 -35594711 - MIR SINE MIR -2 260 36 186 43 0 0 chr20 31074278 31074301 -35593704 + (TG)n Simple_repeat Simple_repeat 2 24 0 233 301 206 15 chr20 31074342 31074478 -35593527 + MIR SINE MIR 12 173 -89 520 201 52 81 chr20 31074510 31074592 -35593413 + MIR SINE MIR 81 164 -98 2224 110 3 10 chr20 31074592 31074893 -35593112 + AluSx SINE Alu 1 299 -13 520 201 52 81 chr20 31074893 31074984 -35593021 + MIR SINE MIR 164 249 -13 425 251 139 14 chr20 31075065 31075288 -35592717 - L1ME3A LINE L1 -255 5915 5665 377 294 47 14 chr20 31075297 31075533 -35592472 - MLT1L LTR MaLR -164 451 181 1754 134 0 34 chr20 31075769 31076037 -35591968 + AluSx SINE Alu 36 294 -18 562 226 44 109 chr20 31076112 31076360 -35591645 - MER102b DNA MER1_type 0 341 110 1831 153 7 17 chr20 31076362 31076656 -35591349 - AluJb SINE Alu -21 291 1 2471 92 0 3 chr20 31076660 31076966 -35591039 - AluSp SINE Alu -8 305 1 1312 125 0 5 chr20 31077005 31077182 -35590823 - AluSg/x SINE Alu -1 309 132 2450 66 0 26 chr20 31077182 31077487 -35590518 - AluY SINE Alu -14 297 1 1312 125 0 5 chr20 31077487 31077501 -35590504 - AluSg/x SINE Alu -178 132 119 2331 107 7 3 chr20 31077518 31077827 -35590178 + AluSx SINE Alu 3 312 0 1790 167 4 0 chr20 31077848 31078154 -35589851 + AluJb SINE Alu 1 307 0 654 270 150 50 chr20 31078559 31078632 -35589373 + MLT1L LTR MaLR 220 284 -331 198 0 0 0 chr20 31078632 31078654 -35589351 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 654 270 150 50 chr20 31078654 31078880 -35589125 + MLT1L LTR MaLR 284 549 -66 2389 101 0 0 chr20 31078892 31079188 -35588817 + AluSx SINE Alu 1 296 -16 1205 233 131 50 chr20 31079306 31079635 -35588370 - MLT1J LTR MaLR -38 473 101 2249 120 3 0 chr20 31079635 31079651 -35588354 - AluSx SINE Alu -3 309 295 180 77 0 0 chr20 31079651 31079677 -35588328 + (TTGG)n Simple_repeat Simple_repeat 2 27 0 2249 120 3 0 chr20 31079677 31079968 -35588037 - AluSx SINE Alu -17 295 1 1205 233 131 50 chr20 31079968 31080059 -35587946 - MLT1J LTR MaLR -410 101 19 1772 203 176 7 chr20 31080196 31080759 -35587246 - L1M4 LINE L1 -3006 3140 2483 440 301 148 51 chr20 31080767 31081159 -35586846 - L1ME LINE L1 -302 5819 5390 557 279 59 36 chr20 31081370 31081592 -35586413 + MIR SINE MIR 21 247 -15 558 264 106 19 chr20 31081605 31081813 -35586192 - MIR SINE MIR -2 260 35 203 239 0 0 chr20 31081842 31081888 -35586117 - MIR SINE MIR -63 145 100 530 233 100 7 chr20 31082931 31083081 -35584924 - MIR3 SINE MIR -9 199 36 199 250 181 0 chr20 31083364 31083436 -35584569 - MIR SINE MIR -89 119 35 204 299 30 0 chr20 31083856 31083923 -35584082 + MIR SINE MIR 82 150 -58 207 270 0 0 chr20 31084085 31084148 -35583857 - L2 LINE L2 -300 2972 2910 658 154 0 0 chr20 31084200 31084326 -35583679 + FLAM_C SINE Alu 21 146 0 555 261 57 11 chr20 31084670 31084846 -35583159 + MIR SINE MIR 79 262 0 416 268 22 80 chr20 31084853 31084991 -35583014 - L2 LINE L2 -21 3251 3122 2248 127 0 0 chr20 31085013 31085320 -35582685 + AluSx SINE Alu 1 307 -5 273 235 143 10 chr20 31085814 31085912 -35582093 - MER102a DNA MER1_type -6 324 214 551 193 67 25 chr20 31085916 31086035 -35581970 + FLAM_C SINE Alu 2 125 -18 721 274 94 17 chr20 31086097 31086247 -35581758 + MIR SINE MIR 3 179 -83 2287 102 0 13 chr20 31086247 31086383 -35581622 + AluSx SINE Alu 1 137 -175 2413 82 0 3 chr20 31086383 31086675 -35581330 + AluY SINE Alu 1 291 -20 2287 102 0 13 chr20 31086675 31086841 -35581164 + AluSx SINE Alu 137 299 -13 721 274 94 17 chr20 31086841 31086924 -35581081 + MIR SINE MIR 179 254 -8 326 314 5 77 chr20 31086936 31087052 -35580953 - MER102a DNA MER1_type -149 192 95 1629 192 0 24 chr20 31087052 31087379 -35580626 - AluJo SINE Alu 0 320 1 326 314 5 77 chr20 31087379 31087468 -35580537 - MER102a DNA MER1_type -246 95 1 1749 131 4 0 chr20 31087716 31087960 -35580045 + AluJo SINE Alu 1 245 -67 35 0 0 0 chr20 31088003 31088038 -35579967 + AT_rich Low_complexity Low_complexity 1 35 0 2070 82 99 14 chr20 31088566 31088848 -35579157 + AluSx SINE Alu 7 312 0 312 297 85 68 chr20 31088891 31089184 -35578821 + L2 LINE L2 2395 2692 -622 1706 130 49 52 chr20 31089458 31089765 -35578240 - AluJo SINE Alu -6 306 1 2494 79 0 3 chr20 31090047 31090351 -35577654 - AluSq SINE Alu -10 303 1 3487 116 4 2 chr20 31091222 31091741 -35576264 + MER41B LTR ERV1 1 520 -115 2199 97 28 0 chr20 31091743 31092031 -35575974 - AluSg SINE Alu -14 296 1 284 246 15 0 chr20 31092128 31092193 -35575812 + MLT1J LTR MaLR 3 68 -443 2314 110 10 13 chr20 31092209 31092382 -35575623 - AluSx SINE Alu -3 309 136 2581 73 0 9 chr20 31092382 31092697 -35575308 - AluSp SINE Alu -1 312 1 2314 110 10 13 chr20 31092697 31092832 -35575173 - AluSx SINE Alu -176 136 2 25 31 0 0 chr20 31092842 31092874 -35575131 + AT_rich Low_complexity Low_complexity 1 32 0 1012 273 19 72 chr20 31092944 31093277 -35574728 + MLT1J LTR MaLR 115 423 -88 2170 120 3 0 chr20 31093277 31093568 -35574437 - AluSx SINE Alu -20 292 1 1012 273 19 72 chr20 31093568 31093651 -35574354 + MLT1J LTR MaLR 423 509 -2 1993 223 44 2 chr20 31093654 31094067 -35573938 - MLT1G LTR MaLR 0 590 161 2301 98 7 0 chr20 31094501 31094806 -35573199 + AluSx SINE Alu 1 307 -5 2426 63 0 30 chr20 31094957 31095256 -35572749 + AluY SINE Alu 1 290 -21 2272 116 0 0 chr20 31095273 31095567 -35572438 + AluSg SINE Alu 1 294 -16 1981 166 3 0 chr20 31095745 31096035 -35571970 + AluJb SINE Alu 1 291 -21 768 147 16 0 chr20 31096616 31096745 -35571260 - FLAM_C SINE Alu -2 131 1 2340 91 7 0 chr20 31096959 31097256 -35570749 + AluSp SINE Alu 1 299 -14 2406 64 0 0 chr20 31097404 31097724 -35570281 + AluY SINE Alu 1 320 0 1933 144 0 4 chr20 31097740 31098045 -35569960 + AluJb SINE Alu 9 312 0 848 142 8 0 chr20 31098130 31098250 -35569755 + AluJb SINE Alu 9 129 -183 199 178 67 0 chr20 31098361 31098406 -35569599 + MIR SINE MIR 202 249 -13 * 215 61 61 0 chr20 31098376 31098409 -35569596 + L2 LINE L2 3265 3299 -14 2471 63 33 0 chr20 31098516 31098816 -35569189 - AluY SINE Alu -1 310 1 2563 67 0 3 chr20 31098816 31099129 -35568876 - AluSq SINE Alu -1 312 1 482 194 31 148 chr20 31099129 31099325 -35568680 + L2 LINE L2 3140 3312 -1 234 174 0 0 chr20 31099563 31099609 -35568396 + (CGTG)n Simple_repeat Simple_repeat 3 48 0 312 234 78 70 chr20 31102056 31102184 -35565821 - MIR SINE MIR -74 188 60 306 308 75 15 chr20 31102620 31102753 -35565252 - L2 LINE L2 -10 3262 3122 22 0 0 0 chr20 31103177 31103199 -35564806 + AT_rich Low_complexity Low_complexity 1 22 0 2434 81 3 0 chr20 31103232 31103528 -35564477 - AluSp SINE Alu -15 298 2 2306 106 0 3 chr20 31103557 31103860 -35564145 + AluSx SINE Alu 1 302 -10 894 159 97 0 chr20 31103899 31104044 -35563961 + FRAM SINE Alu 1 152 -24 2198 125 3 0 chr20 31104292 31104595 -35563410 - AluSx SINE Alu -8 304 1 330 248 44 26 chr20 31104597 31104710 -35563295 - L1MC4a LINE L1 -1906 5902 5788 781 141 160 6 chr20 31104730 31104886 -35563119 + MER5A DNA MER1_type 4 183 -6 730 239 58 26 chr20 31104890 31105038 -35562967 - L1MC4a LINE L1 -2046 5762 5603 2176 96 6 45 chr20 31105038 31105351 -35562654 - AluSx SINE Alu -11 301 1 730 239 58 26 chr20 31105351 31105428 -35562577 - L1MC4a LINE L1 -2205 5603 5530 2176 117 3 19 chr20 31105481 31105798 -35562207 - AluSx SINE Alu 0 312 1 873 208 45 40 chr20 31106496 31106638 -35561367 + MIR SINE MIR 20 165 -97 2279 106 0 17 chr20 31106638 31106940 -35561065 + AluSg SINE Alu 1 297 -13 873 208 45 40 chr20 31106940 31106999 -35561006 + MIR SINE MIR 165 222 -40 716 150 0 0 chr20 31107046 31107166 -35560839 - FLAM_C SINE Alu -1 142 23 2074 101 63 0 chr20 31107475 31107761 -35560244 + AluSq SINE Alu 1 304 -9 433 239 43 29 chr20 31108026 31108164 -35559841 - MIR SINE MIR -122 140 1 1643 116 0 0 chr20 31108249 31108464 -35559541 - AluSg/x SINE Alu -16 296 82 * 2295 99 3 0 chr20 31108463 31108757 -35559248 - AluSx SINE Alu -17 295 1 1007 150 0 48 chr20 31109288 31109455 -35558550 + FRAM SINE Alu 1 159 -17 984 291 35 9 chr20 31109558 31109901 -35558104 - L1MC/D LINE L1 -2109 5699 5348 2506 80 0 0 chr20 31109905 31110207 -35557798 - AluY SINE Alu -9 302 1 543 179 0 0 chr20 31110333 31110417 -35557588 + FRAM/FAM SINE Alu 1 81 -95 181 320 90 0 chr20 31110791 31110891 -35557114 - L2 LINE L2 -188 3084 2976 219 139 0 0 chr20 31110954 31110990 -35557015 + (A)n Simple_repeat Simple_repeat 1 36 0 1994 152 3 13 chr20 31111038 31111340 -35556665 + AluSx SINE Alu 1 299 -13 2382 78 0 7 chr20 31111355 31111651 -35556354 - AluSg SINE Alu -16 294 1 2186 130 10 0 chr20 31112253 31112545 -35555460 + AluSx SINE Alu 1 295 -17 295 217 145 72 chr20 31112835 31112987 -35555018 - L1ME4a LINE L1 0 6121 5959 21 0 0 0 chr20 31113091 31113112 -35554893 + AT_rich Low_complexity Low_complexity 1 21 0 309 191 24 48 chr20 31113287 31113371 -35554634 - L1ME4a LINE L1 -199 5922 5841 1922 144 10 20 chr20 31113511 31113680 -35554325 - AluJb SINE Alu -12 300 134 2382 93 0 0 chr20 31113680 31113971 -35554034 - AluSg SINE Alu -19 291 1 1922 144 10 20 chr20 31113971 31114100 -35553905 - AluJb SINE Alu -178 134 5 564 165 28 0 chr20 31114189 31114298 -35553707 - FRAM SINE Alu -4 172 61 462 220 195 0 chr20 31114311 31114429 -35553576 - FLAM_C SINE Alu -1 142 2 194 0 39 0 chr20 31114431 31114457 -35553548 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1850 153 7 3 chr20 31114457 31114739 -35553266 - AluJo SINE Alu -29 283 1 1200 152 13 61 chr20 31114828 31114963 -35553042 + AluSx SINE Alu 1 122 -190 1711 100 0 9 chr20 31114963 31115192 -35552813 + AluSc SINE Alu 83 309 0 1200 152 13 61 chr20 31115192 31115286 -35552719 + AluSx SINE Alu 122 219 -93 271 116 0 0 chr20 31115380 31115423 -35552582 + Alu SINE Alu 251 293 -9 23 0 0 0 chr20 31115513 31115536 -35552469 + AT_rich Low_complexity Low_complexity 1 23 0 2372 95 0 7 chr20 31115598 31115903 -35552102 - AluSc SINE Alu -6 303 1 492 292 176 18 chr20 31115903 31116232 -35551773 - L1MC4a LINE L1 -1979 5829 5449 2323 96 21 0 chr20 31116242 31116533 -35551472 - AluSx SINE Alu -15 297 1 829 241 0 0 chr20 31116593 31116755 -35551250 - FRAM SINE Alu -4 162 1 911 114 45 0 chr20 31116784 31116916 -35551089 - AluSg/x SINE Alu -2 310 173 1143 190 19 0 chr20 31116956 31117167 -35550838 + AluJo SINE Alu 84 298 -14 2368 87 0 0 chr20 31117339 31117639 -35550366 + AluSc SINE Alu 1 300 -9 244 194 28 42 chr20 31118033 31118105 -35549900 - L1ME4a LINE L1 -451 5670 5600 1414 144 42 36 chr20 31118389 31118415 -35549590 - MER88 LTR ERVL 0 464 440 2353 105 0 7 chr20 31118415 31118721 -35549284 + AluSx SINE Alu 1 304 -8 1414 144 42 36 chr20 31118721 31119024 -35548981 - MER88 LTR ERVL -24 440 45 1511 176 107 94 chr20 31119040 31119072 -35548933 + MER88 LTR ERVL 1 31 -433 1785 190 7 0 chr20 31119072 31119372 -35548633 - AluJo SINE Alu -10 302 1 1511 176 107 94 chr20 31119372 31119696 -35548309 + MER88 LTR ERVL 31 349 -115 2195 120 7 0 chr20 31119696 31119996 -35548009 + AluJb SINE Alu 1 302 -10 2413 66 7 10 chr20 31119998 31120299 -35547706 + AluY SINE Alu 1 300 -11 1511 176 107 94 chr20 31120299 31120386 -35547619 + MER88 LTR ERVL 349 454 -10 458 280 60 6 chr20 31120882 31121064 -35546941 - L2 LINE L2 0 3313 3122 2251 92 3 3 chr20 31121275 31121558 -35546447 + AluSq SINE Alu 1 283 -30 797 280 173 8 chr20 31121581 31122240 -35545765 + L2 LINE L2 2529 3311 -2 248 333 50 37 chr20 31122280 31122596 -35545409 - L2 LINE L2 -249 3023 2704 198 249 30 146 chr20 31123503 31123668 -35544337 + MIR SINE MIR 2 147 -115 749 225 134 30 chr20 31123853 31124084 -35543921 + MIR SINE MIR 8 262 0 602 269 42 10 chr20 31124079 31124272 -35543733 - MIR SINE MIR -57 205 7 * 344 294 53 37 chr20 31124344 31124531 -35543474 - MER20B DNA MER1_type -593 190 1 2398 75 10 7 chr20 31124710 31125003 -35543002 + AluSc SINE Alu 1 294 -15 453 304 76 18 chr20 31125042 31125266 -35542739 + MIR SINE MIR 2 238 -24 2104 101 42 3 chr20 31125907 31126195 -35541810 + AluSx SINE Alu 5 303 -9 2019 160 0 6 chr20 31126395 31126707 -35541298 + AluJb SINE Alu 3 312 0 396 254 51 8 chr20 31127044 31127162 -35540843 - MIR SINE MIR -123 139 17 789 243 55 0 chr20 31127979 31128160 -35539845 - MIR SINE MIR -70 192 2 2298 93 7 10 chr20 31128479 31128781 -35539224 - AluSx SINE Alu -11 301 1 2539 54 0 10 chr20 31128844 31129139 -35538866 + AluY SINE Alu 1 292 -19 337 314 81 54 chr20 31129208 31129393 -35538612 - MIR SINE MIR -28 234 45 182 351 117 0 chr20 31129725 31129819 -35538186 - MER5A DNA MER1_type -84 105 1 402 290 57 30 chr20 31129881 31130056 -35537949 + MIR SINE MIR 2 184 -63 660 273 31 82 chr20 31130314 31130570 -35537435 + MIR SINE MIR 2 244 -18 817 159 0 29 chr20 31130677 31130815 -35537190 + AluJo SINE Alu 1 134 -178 1712 138 116 22 chr20 31130918 31131194 -35536811 - AluSx SINE Alu -9 303 2 2355 55 48 3 chr20 31131239 31131530 -35536475 - AluY SINE Alu -7 304 1 2211 91 17 14 chr20 31131668 31131965 -35536040 + AluSx SINE Alu 1 298 -14 915 156 31 0 chr20 31131976 31132136 -35535869 + FRAM SINE Alu 1 165 -1 295 218 209 0 chr20 31132159 31132269 -35535736 - MLT1J LTR MaLR -136 375 243 715 246 31 10 chr20 31133756 31133951 -35534054 - MIR SINE MIR -12 250 52 182 111 44 67 chr20 31133996 31134041 -35533964 + MIR SINE MIR 110 153 -55 1088 305 104 13 chr20 31135731 31135759 -35532246 - MLT1L LTR MaLR -20 595 571 1198 150 77 90 chr20 31135759 31135926 -35532079 + MER46B DNA MER2_type 1 37 -2694 1595 167 8 8 chr20 31135926 31136177 -35531828 + AluJo SINE Alu 37 287 -25 1198 150 77 90 chr20 31136177 31136375 -35531630 + MER46B DNA MER2_type 37 236 0 1088 305 104 13 chr20 31136375 31136883 -35531122 - MLT1L LTR MaLR -44 571 10 279 339 130 26 chr20 31137001 31137231 -35530774 - MLT1K LTR MaLR -210 378 125 604 311 24 19 chr20 31137769 31137978 -35530027 + MIR SINE MIR 2 211 -51 547 120 0 0 chr20 31138097 31138172 -35529833 + AluSg/x SINE Alu 208 282 -27 2496 87 0 0 chr20 31138210 31138509 -35529496 + AluSg SINE Alu 1 299 -11 357 272 88 0 chr20 31138667 31138781 -35529224 - MIR SINE MIR -62 200 77 813 107 113 96 chr20 31139415 31139592 -35528413 + AluSq SINE Alu 124 303 -10 2527 68 0 0 chr20 31139595 31139891 -35528114 + AluY SINE Alu 1 296 -15 193 373 109 0 chr20 31140172 31140282 -35527723 - L2 LINE L2 -10 3262 3141 2042 141 0 3 chr20 31140881 31141172 -35526833 + AluJo SINE Alu 1 290 -22 2288 95 13 25 chr20 31141218 31141533 -35526472 - AluSp SINE Alu -2 311 1 332 321 27 0 chr20 31141704 31141816 -35526189 - MIR SINE MIR -116 146 32 348 263 129 94 chr20 31141876 31141933 -35526072 - MIR SINE MIR -1 261 207 2515 67 3 0 chr20 31141933 31142233 -35525772 + AluY SINE Alu 1 301 -10 348 263 129 94 chr20 31142233 31142346 -35525659 - MIR SINE MIR -55 207 85 2394 91 13 3 chr20 31142895 31143202 -35524803 - AluSq SINE Alu -3 310 1 317 293 172 13 chr20 31143440 31143754 -35524251 + L2 LINE L2 2600 2963 -351 401 176 15 0 chr20 31143851 31143919 -35524086 - AluSg/x SINE Alu -104 196 128 1320 86 0 0 chr20 31143923 31144085 -35523920 - AluSg/x SINE Alu -17 295 134 1907 122 4 0 chr20 31144085 31144376 -35523629 - AluSc SINE Alu 0 309 35 240 263 263 0 chr20 31144462 31144542 -35523463 + L2 LINE L2 3199 3299 -14 288 244 58 0 chr20 31145089 31145175 -35522830 + MIR SINE MIR 73 163 -99 280 257 27 0 chr20 31146071 31146145 -35521860 - L2 LINE L2 0 3313 3238 562 272 38 22 chr20 31146364 31146548 -35521457 + MER5A DNA MER1_type 3 189 0 398 251 84 11 chr20 31146561 31146731 -35521274 - MIR SINE MIR -58 150 2 275 284 96 51 chr20 31147074 31147271 -35520734 - MLT1J LTR MaLR -196 315 110 206 196 0 54 chr20 31147625 31147681 -35520324 - MIR SINE MIR -171 91 39 260 127 55 18 chr20 31147882 31147937 -35520068 - MIR SINE MIR -26 236 180 1831 123 4 0 chr20 31148570 31148814 -35519191 - AluSx SINE Alu -63 249 5 2390 86 7 0 chr20 31148989 31149290 -35518715 + AluSp SINE Alu 1 303 -10 243 307 89 0 chr20 31149363 31149464 -35518541 - L2 LINE L2 -18 3254 3145 1912 166 0 0 chr20 31149489 31149784 -35518221 + AluJb SINE Alu 1 295 -17 526 100 0 26 chr20 31149870 31150071 -35517934 + AluSg/x SINE Alu 84 308 -1 2453 88 0 3 chr20 31150078 31150384 -35517621 + AluY SINE Alu 1 305 -6 2381 89 0 7 chr20 31150391 31150697 -35517308 + AluSq SINE Alu 1 302 -11 214 288 61 0 chr20 31150900 31150966 -35517039 + MIR SINE MIR 23 92 -170 305 260 69 61 chr20 31151002 31151178 -35516827 + MER5A DNA MER1_type 16 178 0 273 169 123 0 chr20 31151241 31151306 -35516699 + MIR SINE MIR 33 105 -103 194 241 241 0 chr20 31151783 31151862 -35516143 + MIR SINE MIR 39 136 -72 209 139 23 0 chr20 31152702 31152745 -35515260 + CT-rich Low_complexity Low_complexity 1 44 0 239 350 81 26 chr20 31152903 31153137 -35514868 - L1MC4a LINE L1 -1833 5975 5729 220 226 32 0 chr20 31153204 31153266 -35514739 + CT-rich Low_complexity Low_complexity 1 64 0 182 169 364 39 chr20 31153705 31153782 -35514223 + MIR SINE MIR 82 183 -79 249 342 70 0 chr20 31155606 31155720 -35512285 - MIR SINE MIR -25 237 116 1613 168 158 18 chr20 31156653 31156867 -35511138 - Tigger2a DNA MER2_type -2274 434 251 1811 81 0 4 chr20 31156867 31157102 -35510903 + AluY SINE Alu 1 234 -77 1834 94 0 0 chr20 31157102 31157347 -35510658 + AluSg SINE Alu 49 293 -17 1613 168 158 18 chr20 31157347 31157512 -35510493 - Tigger2a DNA MER2_type -2456 252 1 257 208 139 0 chr20 31157521 31157593 -35510412 - MIR SINE MIR -69 193 112 23 33 0 0 chr20 31158348 31158378 -35509627 + GC_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr20 31158394 31158429 -35509576 + GC_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr20 31158506 31158538 -35509467 + GC_rich Low_complexity Low_complexity 1 32 0 363 221 23 17 chr20 31158570 31158684 -35509321 + MIR SINE MIR 30 146 -62 1525 127 72 28 chr20 31158698 31158989 -35509016 - AluJb SINE Alu -3 309 6 264 289 10 29 chr20 31158993 31159097 -35508908 + MIR SINE MIR 65 166 -96 309 244 61 0 chr20 31159112 31159194 -35508811 + L2 LINE L2 3184 3270 -2 266 277 181 0 chr20 31159276 31159419 -35508586 + MIR SINE MIR 66 252 -10 905 189 12 0 chr20 31159559 31159728 -35508277 - FRAM SINE Alu -12 164 1 2295 73 3 13 chr20 31159732 31160046 -35507959 - AluY SINE Alu 0 311 1 921 139 139 68 chr20 31160072 31160201 -35507804 + AluSg SINE Alu 3 121 -189 2230 101 0 7 chr20 31160201 31160507 -35507498 + AluSq SINE Alu 1 304 -9 921 139 139 68 chr20 31160507 31160643 -35507362 + AluSg SINE Alu 121 287 -23 2163 102 0 7 chr20 31160650 31160955 -35507050 + AluSx SINE Alu 1 303 -9 2030 118 3 16 chr20 31160955 31161260 -35506745 + AluSg SINE Alu 1 301 -9 1294 184 7 74 chr20 31161263 31161572 -35506433 + AluJo SINE Alu 1 288 -24 1494 154 72 4 chr20 31161572 31161851 -35506154 + AluJb SINE Alu 1 298 -14 877 166 70 0 chr20 31162622 31162779 -35505226 + AluSx SINE Alu 1 168 -144 5272 136 72 32 chr20 31162783 31164308 -35503697 - pTR5 LTR ERV1 0 2438 744 942 87 16 0 chr20 31164309 31164435 -35503570 + AluSx SINE Alu 164 291 -19 2312 85 3 0 chr20 31164762 31165069 -35502936 - AluSp SINE Alu -5 308 1 258 32 0 0 chr20 31165074 31165105 -35502900 + (TG)n Simple_repeat Simple_repeat 2 32 0 1223 164 4 66 chr20 31165155 31165275 -35502730 - AluJo SINE Alu -66 246 149 2312 84 0 3 chr20 31165275 31165586 -35502419 - AluSx SINE Alu -2 310 1 1223 164 4 66 chr20 31165586 31165721 -35502284 - AluJo SINE Alu -163 149 7 332 256 124 16 chr20 31165785 31165906 -35502099 + MIR SINE MIR 20 153 -109 632 111 30 0 chr20 31166283 31166382 -35501623 + U6 snRNA snRNA 1 102 -5 2303 64 3 3 chr20 31167012 31167307 -35500698 + AluSg SINE Alu 1 295 -15 814 128 0 48 chr20 31167353 31167478 -35500527 + FLAM_C SINE Alu 14 132 -11 661 163 89 0 chr20 31167501 31167624 -35500381 + AluJo SINE Alu 2 135 -177 2218 92 3 0 chr20 31167625 31167919 -35500086 + AluSc SINE Alu 1 295 -14 1987 130 3 10 chr20 31167921 31168215 -35499790 + AluSx SINE Alu 1 294 -18 405 0 0 0 chr20 31168215 31168260 -35499745 + (TA)n Simple_repeat Simple_repeat 2 46 0 2127 91 0 14 chr20 31168274 31168571 -35499434 + AluSc SINE Alu 1 293 -16 1069 158 6 0 chr20 31168572 31168737 -35499268 - AluSx SINE Alu -140 172 7 455 116 0 0 chr20 31168742 31168811 -35499194 + L1MB8 LINE L1 6110 6178 0 2195 92 0 3 chr20 31168820 31169112 -35498893 + AluSg SINE Alu 1 291 -19 599 174 122 0 chr20 31169557 31169672 -35498333 - FLAM_A SINE Alu -1 132 4 1156 188 0 31 chr20 31169785 31169921 -35498084 + AluJb SINE Alu 1 130 -182 1978 120 7 0 chr20 31169921 31170233 -35497772 + AluSx SINE Alu 1 314 0 1156 188 0 31 chr20 31170233 31170318 -35497687 + AluJb SINE Alu 130 216 -96 2209 83 10 0 chr20 31170359 31170661 -35497344 - AluSx SINE Alu -6 306 2 2179 215 67 47 chr20 31170780 31171167 -35496838 + MER4B LTR ERV1 4 409 -201 2238 101 0 0 chr20 31171167 31171465 -35496540 - AluSx SINE Alu -14 298 1 2179 215 67 47 chr20 31171465 31171672 -35496333 + MER4B LTR ERV1 409 610 0 219 356 54 7 chr20 31171767 31171876 -35496129 + MIR3 SINE MIR 40 159 -49 2100 74 3 37 chr20 31171876 31172030 -35495975 - AluSg SINE Alu -21 289 148 2352 52 3 10 chr20 31172030 31172337 -35495668 - AluY SINE Alu -6 305 1 2100 74 3 37 chr20 31172337 31172480 -35495525 - AluSg SINE Alu -162 148 2 219 356 54 7 chr20 31172480 31172519 -35495486 + MIR3 SINE MIR 159 195 -13 206 298 87 10 chr20 31172497 31172601 -35495404 + MIR SINE MIR 100 211 -51 * 2001 96 0 11 chr20 31173779 31174114 -35493891 - AluSc SINE Alu 0 332 1 1732 141 17 10 chr20 31174114 31174404 -35493601 - AluJo SINE Alu -8 304 13 627 265 89 62 chr20 31174668 31174760 -35493245 - L1ME3 LINE L1 -332 5830 5742 806 128 0 64 chr20 31174760 31174901 -35493104 - FLAM_C SINE Alu -1 132 1 627 265 89 62 chr20 31174901 31175133 -35492872 - L1ME3 LINE L1 -420 5742 5497 2389 61 0 3 chr20 31175133 31175429 -35492576 - AluY SINE Alu -16 295 1 1551 167 16 66 chr20 31175501 31175685 -35492320 - AluJb SINE Alu -1 301 138 2359 80 0 0 chr20 31175685 31175985 -35492020 - AluSq SINE Alu -13 300 1 1551 167 16 66 chr20 31175985 31176117 -35491888 - AluJb SINE Alu -164 138 1 268 347 5 51 chr20 31176205 31176401 -35491604 + L2 LINE L2 2990 3176 -96 294 318 11 11 chr20 31176456 31176544 -35491461 + MER91A DNA MER1_type 107 194 -2 2079 106 36 0 chr20 31176852 31177153 -35490852 - AluSx SINE Alu 0 312 1 941 117 0 0 chr20 31177168 31177296 -35490709 - FLAM_C SINE Alu -5 128 1 1362 171 19 65 chr20 31177298 31177462 -35490543 - AluJo SINE Alu -14 298 153 2492 65 0 0 chr20 31177462 31177772 -35490233 - AluY SINE Alu -1 310 1 1362 171 19 65 chr20 31177772 31177917 -35490088 - AluJo SINE Alu -159 153 3 1945 124 21 10 chr20 31177934 31178094 -35489911 - AluSx SINE Alu -19 293 127 2406 60 0 7 chr20 31178094 31178394 -35489611 - AluY SINE Alu -13 298 1 1945 124 21 10 chr20 31178394 31178523 -35489482 - AluSx SINE Alu -185 127 1 2147 114 0 0 chr20 31179242 31179540 -35488465 - AluSx SINE Alu -14 298 1 197 286 0 16 chr20 31180446 31180509 -35487496 - MIR SINE MIR -83 179 118 183 324 59 20 chr20 31180646 31180748 -35487257 - MIR SINE MIR -46 216 111 250 125 0 0 chr20 31180805 31180845 -35487160 + MIR SINE MIR 80 119 -143 * 706 276 128 33 chr20 31180832 31181223 -35486782 - L2 LINE L2 -31 3282 2855 427 233 112 0 chr20 31181628 31181744 -35486261 + MIR SINE MIR 31 159 -103 1958 82 0 44 chr20 31181770 31182063 -35485942 - AluSx SINE Alu 0 312 33 342 298 24 24 chr20 31182072 31182196 -35485809 - L2 LINE L2 -1 3312 3189 378 215 13 0 chr20 31182373 31182452 -35485553 - MIR SINE MIR -70 192 113 307 279 8 78 chr20 31182488 31182617 -35485388 + MIR SINE MIR 93 212 -50 330 224 72 46 chr20 31182843 31182861 -35485144 + L1MD2 LINE L1 6105 6121 -238 1692 149 10 10 chr20 31182861 31183156 -35484849 + AluJb SINE Alu 1 295 -17 330 224 72 46 chr20 31183156 31183221 -35484784 + L1MD2 LINE L1 6121 6183 -176 1979 113 31 3 chr20 31183221 31183512 -35484493 + AluSx SINE Alu 2 300 -12 2090 110 7 3 chr20 31183512 31183813 -35484192 + AluSq SINE Alu 1 302 -11 330 224 72 46 chr20 31183813 31183879 -35484126 + L1MD2 LINE L1 6182 6260 -99 * 1012 185 142 50 chr20 31183877 31183972 -35484033 + L1ME LINE L1 5492 5577 -589 1585 152 9 109 chr20 31183972 31184302 -35483703 - AluJb SINE Alu -3 299 3 1012 185 142 50 chr20 31184302 31184339 -35483666 + L1ME LINE L1 5577 5609 -557 1976 120 0 0 chr20 31184339 31184614 -35483391 + AluSx SINE Alu 1 275 -37 1012 185 142 50 chr20 31184614 31184654 -35483351 + L1ME LINE L1 5609 5644 -522 2237 58 0 51 chr20 31184654 31184965 -35483040 + AluY SINE Alu 1 295 -16 1012 185 142 50 chr20 31184965 31185093 -35482912 + L1ME LINE L1 5644 5822 -344 2082 93 3 20 chr20 31185098 31185399 -35482606 + AluSx SINE Alu 6 301 -11 2238 90 0 22 chr20 31185399 31185711 -35482294 + AluSg1 SINE Alu 1 305 -4 2481 68 0 0 chr20 31185711 31186020 -35481985 + AluY SINE Alu 1 309 -2 1285 90 0 0 chr20 31186021 31186198 -35481807 + AluY SINE Alu 132 308 -3 2036 128 0 3 chr20 31186198 31186495 -35481510 + AluSx SINE Alu 1 296 -16 1920 158 0 0 chr20 31186539 31186849 -35481156 - AluSx SINE Alu -2 310 1 1462 145 0 0 chr20 31186872 31187099 -35480906 - AluSg/x SINE Alu -5 307 81 2070 120 0 7 chr20 31187153 31187452 -35480553 + AluSg SINE Alu 1 297 -13 2043 103 38 0 chr20 31187463 31187753 -35480252 + AluSx SINE Alu 1 301 -11 2202 84 3 7 chr20 31188447 31188743 -35479262 - AluSg SINE Alu -15 295 1 2335 65 7 0 chr20 31188753 31189047 -35478958 - AluSx SINE Alu -10 302 7 251 311 88 15 chr20 31189156 31189264 -35478741 - MIR SINE MIR -72 136 42 229 257 54 14 chr20 31190071 31190145 -35477860 + MIR3 SINE MIR 78 154 -54 24 0 0 0 chr20 31190715 31190739 -35477266 + GC_rich Low_complexity Low_complexity 1 24 0 197 216 0 0 chr20 31191960 31191997 -35476008 - MER5A DNA MER1_type -24 165 129 195 296 57 23 chr20 31192064 31192152 -35475853 - MIR3 SINE MIR -50 158 68 226 295 0 0 chr20 31192978 31193039 -35474966 - MIR SINE MIR -57 151 91 263 283 44 35 chr20 31193370 31193483 -35474522 + MIR SINE MIR 149 262 0 381 277 9 18 chr20 31194182 31194294 -35473711 - MIR SINE MIR -16 246 136 221 319 184 7 chr20 31194377 31194518 -35473487 + MIR SINE MIR 88 253 -9 335 239 0 103 chr20 31194538 31194584 -35473421 - MIR SINE MIR -78 184 135 2024 127 0 7 chr20 31194584 31194883 -35473122 - AluSx SINE Alu -15 297 1 335 239 0 103 chr20 31194883 31194953 -35473052 - MIR SINE MIR -127 135 80 1747 115 57 7 chr20 31195174 31195453 -35472552 - AluSx SINE Alu -19 293 1 2433 81 0 0 chr20 31195453 31195761 -35472244 - AluSx SINE Alu -3 309 1 188 239 165 18 chr20 31196174 31196283 -35471722 + MIR3 SINE MIR 8 132 -76 254 50 0 0 chr20 31196286 31196326 -35471679 - AluSx SINE Alu -3 298 259 1468 131 5 0 chr20 31196326 31196547 -35471458 - AluSx SINE Alu -90 222 1 2073 112 3 10 chr20 31196557 31196861 -35471144 - AluSg SINE Alu -8 302 1 345 260 89 34 chr20 31196992 31197138 -35470867 - L2 LINE L2 -5 3308 3155 299 254 202 18 chr20 31197138 31197252 -35470753 + MER69 DNA AcHobo 1 135 -1091 1757 159 10 3 chr20 31197413 31197589 -35470416 - AluSq SINE Alu -2 311 131 2160 102 7 3 chr20 31197589 31197892 -35470113 - AluSx SINE Alu -8 304 1 1757 159 10 3 chr20 31197892 31198024 -35469981 - AluSq SINE Alu -182 131 1 2454 50 0 0 chr20 31198441 31198740 -35469265 - AluY SINE Alu -11 300 2 2286 50 40 3 chr20 31198818 31199117 -35468888 - AluY SINE Alu -1 310 1 1934 82 60 0 chr20 31199117 31199397 -35468608 - AluSp SINE Alu -11 302 5 472 138 0 0 chr20 31199417 31199497 -35468508 - AluS SINE Alu 0 310 231 1126 103 0 6 chr20 31199499 31199655 -35468350 - AluSq SINE Alu -158 155 1 562 118 200 9 chr20 31199751 31199861 -35468144 + FLAM_C SINE Alu 1 131 -2 198 0 0 0 chr20 31199861 31199883 -35468122 + (TG)n Simple_repeat Simple_repeat 1 22 0 410 288 7 21 chr20 31199883 31200027 -35467978 - L1MC3 LINE L1 -1140 6703 6550 364 327 64 0 chr20 31200028 31200138 -35467867 - L1MC4 LINE L1 -1339 6703 6587 503 265 60 17 chr20 31200309 31200459 -35467546 - L1ME3A LINE L1 -219 5951 5792 2287 77 7 0 chr20 31200459 31200757 -35467248 - AluSp SINE Alu -13 300 1 503 265 60 17 chr20 31200757 31200876 -35467129 - L1ME3A LINE L1 -378 5792 5680 395 296 0 9 chr20 31200959 31201074 -35466931 - MIR3 SINE MIR -13 195 82 2273 110 0 3 chr20 31201218 31201517 -35466488 + AluSg SINE Alu 1 298 -12 2379 106 0 3 chr20 31201561 31201863 -35466142 + AluSc SINE Alu 2 302 -7 1782 156 41 0 chr20 31201945 31202215 -35465790 - AluJb SINE Alu -31 281 1 2265 105 0 3 chr20 31202223 31202518 -35465487 - AluSx SINE Alu -18 294 1 852 273 91 6 chr20 31202519 31202871 -35465134 + L2 LINE L2 2523 2904 -410 1534 164 18 29 chr20 31202989 31203270 -35464735 - AluJo SINE Alu -2 310 33 1315 83 65 0 chr20 31203270 31203439 -35464566 - AluJb SINE Alu -110 202 23 545 191 18 18 chr20 31203444 31203554 -35464451 - MLT1G LTR MaLR -462 128 19 2466 79 0 16 chr20 31203567 31203883 -35464122 + AluSp SINE Alu 1 311 -2 443 230 63 16 chr20 31203909 31204035 -35463970 + FLAM_A SINE Alu 1 132 -1 1166 101 0 35 chr20 31204177 31204346 -35463659 + AluSx SINE Alu 1 163 -149 1348 174 0 99 chr20 31204362 31204695 -35463310 + AluJb SINE Alu 2 301 -1 701 187 0 8 chr20 31204695 31204818 -35463187 + MLT1H1 LTR MaLR 418 539 -16 489 243 100 21 chr20 31204853 31204993 -35463012 + L2 LINE L2 3161 3311 -2 378 299 43 24 chr20 31205516 31205680 -35462325 - MIR SINE MIR -25 237 71 231 36 0 0 chr20 31205697 31205725 -35462280 + (CAT)n Simple_repeat Simple_repeat 3 30 0 2322 221 47 16 chr20 31205754 31205875 -35462130 + L1MD3 LINE L1 7122 7238 -744 2358 93 3 0 chr20 31205875 31206166 -35461839 - AluSg SINE Alu -18 292 1 2322 221 47 16 chr20 31206166 31206474 -35461531 + L1MD3 LINE L1 7238 7535 -447 1905 155 3 13 chr20 31206474 31206783 -35461222 + AluJb SINE Alu 2 307 -5 2212 97 3 44 chr20 31206792 31207112 -35460893 + AluY SINE Alu 1 307 -4 2322 221 47 16 chr20 31207112 31207347 -35460658 + L1MD3 LINE L1 7542 7982 0 1612 168 4 8 chr20 31207370 31207626 -35460379 + AluJo SINE Alu 1 255 -57 356 271 38 114 chr20 31207681 31207744 -35460261 + L1MDa LINE L1 34 100 -6440 2327 113 0 0 chr20 31207744 31208054 -35459951 + AluSx SINE Alu 3 312 0 356 271 38 114 chr20 31208054 31208307 -35459698 + L1MDa LINE L1 100 326 -6214 1851 165 0 34 chr20 31208385 31208545 -35459460 - AluJb SINE Alu -19 293 146 2489 82 0 3 chr20 31208545 31208851 -35459154 - AluY SINE Alu -6 305 1 1851 165 0 34 chr20 31208851 31208987 -35459018 - AluJb SINE Alu -166 146 7 185 0 40 0 chr20 31209037 31209062 -35458943 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2056 114 3 33 chr20 31209064 31209363 -35458642 - AluSq SINE Alu -23 290 1 2450 81 13 0 chr20 31209384 31209692 -35458313 - AluSp SINE Alu -1 312 1 405 0 0 0 chr20 31209790 31209835 -35458170 + (CA)n Simple_repeat Simple_repeat 1 45 0 738 165 8 8 chr20 31209859 31209981 -35458024 + AluJo/FLAM SINE Alu 1 123 -175 2355 84 3 3 chr20 31209981 31210277 -35457728 - AluY SINE Alu -15 296 1 30 0 0 0 chr20 31210281 31210311 -35457694 + AT_rich Low_complexity Low_complexity 1 30 0 775 251 71 14 chr20 31210311 31210563 -35457442 + L1M4 LINE L1 2320 2593 -3553 2208 122 0 25 chr20 31210563 31210884 -35457121 + AluSq SINE Alu 1 313 0 775 251 71 14 chr20 31210884 31210926 -35457079 + L1M4 LINE L1 2593 2631 -3515 801 144 0 0 chr20 31210936 31211061 -35456944 - AluSg/x SINE Alu -3 307 183 265 59 0 0 chr20 31211061 31211095 -35456910 - AluSp SINE Alu -150 153 120 2337 110 0 0 chr20 31211098 31211408 -35456597 - AluSx SINE Alu -2 310 1 513 199 92 0 chr20 31211411 31211542 -35456463 - L1M4 LINE L1 -3321 2825 2683 1154 171 5 0 chr20 31211545 31211744 -35456261 + AluSg/x SINE Alu 110 309 -1 849 192 46 113 chr20 31211745 31211868 -35456137 + L1M4 LINE L1 2835 2965 -3181 2076 121 3 0 chr20 31211868 31212150 -35455855 - AluSx SINE Alu -29 283 1 849 192 46 113 chr20 31212150 31212224 -35455781 + L1M4 LINE L1 2965 3042 -3104 2021 123 0 60 chr20 31212224 31212395 -35455610 - AluSg SINE Alu -12 298 153 2456 73 0 13 chr20 31212395 31212710 -35455295 - AluYb8 SINE Alu -7 311 1 2021 123 0 60 chr20 31212710 31212855 -35455150 - AluSg SINE Alu -157 153 1 849 192 46 113 chr20 31212855 31213073 -35454932 + L1M4 LINE L1 3042 3223 -2923 774 197 183 90 chr20 31213076 31213231 -35454774 + MLT1C LTR MaLR 152 291 -176 4535 32 2 2 chr20 31213231 31213793 -35454212 + L1PA4 LINE L1 5592 6153 -2 774 197 183 90 chr20 31213793 31213926 -35454079 + MLT1C LTR MaLR 291 467 0 436 186 7 71 chr20 31213926 31213987 -35454018 + L1M4 LINE L1 4269 4332 -1814 2077 151 3 0 chr20 31213987 31214285 -35453720 - AluSx SINE Alu -13 299 1 436 186 7 71 chr20 31214285 31214324 -35453681 + L1M4 LINE L1 4332 4360 -1786 698 181 47 0 chr20 31214324 31214451 -35453554 - FLAM_A SINE Alu 0 133 1 436 186 7 71 chr20 31214451 31214489 -35453516 + L1M4 LINE L1 4360 4399 -1747 2037 109 3 56 chr20 31214491 31214821 -35453184 + AluSq SINE Alu 1 314 0 1795 189 0 10 chr20 31214992 31215298 -35452707 + AluJb SINE Alu 1 303 -9 232 232 54 0 chr20 31215308 31215364 -35452641 - L2 LINE L2 -250 3063 3005 1636 231 61 49 chr20 31215479 31215862 -35452143 - MLT1G1 LTR MaLR 0 595 201 2199 110 0 39 chr20 31215862 31216030 -35451975 - AluSg1 SINE Alu -10 299 147 2464 76 7 0 chr20 31216030 31216331 -35451674 - AluSq SINE Alu -3 310 8 2199 110 0 39 chr20 31216331 31216471 -35451534 - AluSg1 SINE Alu -162 147 3 1636 231 61 49 chr20 31216471 31216675 -35451330 - MLT1G1 LTR MaLR -394 201 1 386 242 58 0 chr20 31216791 31216911 -35451094 - L2 LINE L2 -336 2977 2851 1863 143 10 55 chr20 31217456 31217763 -35450242 - AluJb SINE Alu -19 293 1 851 125 0 29 chr20 31218975 31219111 -35448894 + FLAM_C SINE Alu 2 133 0 2250 108 0 7 chr20 31219232 31219538 -35448467 - AluSx SINE Alu -8 304 1 1745 129 102 0 chr20 31219818 31220104 -35447901 - AluSx SINE Alu 0 312 1 685 176 145 0 chr20 31220381 31220534 -35447471 - AluSg/x SINE Alu 0 304 133 281 258 63 78 chr20 31220534 31220659 -35447346 + L2 LINE L2 2756 2881 -391 2410 109 0 0 chr20 31220659 31220972 -35447033 - AluSq SINE Alu 0 313 1 281 258 63 78 chr20 31220972 31220987 -35447018 + L2 LINE L2 2881 2895 -377 2395 90 3 0 chr20 31220987 31221287 -35446718 - AluY SINE Alu -10 301 1 281 258 63 78 chr20 31221287 31221364 -35446641 + L2 LINE L2 2895 2964 -308 270 327 96 19 chr20 31221365 31221469 -35446536 + L2 LINE L2 3152 3263 -9 2207 119 10 10 chr20 31221487 31221797 -35446208 - AluSx SINE Alu 0 312 3 2059 95 4 7 chr20 31221840 31222114 -35445891 - AluY SINE Alu -10 301 29 2210 110 0 13 chr20 31222117 31222297 -35445708 - AluSx SINE Alu 0 312 136 2435 92 3 0 chr20 31222297 31222601 -35445404 - AluSg SINE Alu -5 305 1 2210 110 0 13 chr20 31222601 31222728 -35445277 - AluSx SINE Alu -176 136 9 26 0 0 0 chr20 31223052 31223078 -35444927 + GC_rich Low_complexity Low_complexity 1 26 0 2294 104 0 7 chr20 31224752 31225049 -35442956 - AluSg SINE Alu -15 295 1 353 348 75 43 chr20 31225448 31225730 -35442275 - L2 LINE L2 -19 3253 2963 299 245 142 19 chr20 31225994 31226100 -35441905 - L2 LINE L2 0 3313 3195 369 0 0 0 chr20 31226148 31226189 -35441816 + (CA)n Simple_repeat Simple_repeat 2 42 0 1017 49 83 0 chr20 31226229 31226373 -35441632 + L1PA4 LINE L1 5997 6152 -3 1067 173 0 32 chr20 31226402 31226587 -35441418 + AluJb SINE Alu 134 312 0 328 302 28 30 chr20 31226686 31226831 -35441174 - MIR SINE MIR -61 147 3 2042 122 13 23 chr20 31226895 31227199 -35440806 - AluSg SINE Alu -9 301 1 884 127 8 30 chr20 31227212 31227346 -35440659 - FLAM_C SINE Alu -12 131 1 2642 43 7 0 chr20 31227625 31227928 -35440077 - AluY SINE Alu -4 307 3 912 176 0 0 chr20 31227933 31228075 -35439930 - AluJo SINE Alu -170 142 1 281 283 58 93 chr20 31228077 31228282 -35439723 + L2 LINE L2 2751 2948 -366 436 223 91 8 chr20 31228391 31228512 -35439493 + L2 LINE L2 3178 3308 -5 430 167 125 17 chr20 31228898 31229018 -35438987 + MIR SINE MIR 102 234 -28 1782 94 5 0 chr20 31229079 31229302 -35438703 - AluSx SINE Alu -86 226 3 649 265 121 9 chr20 31229435 31229658 -35438347 - MIR SINE MIR -1 261 14 1154 69 0 14 chr20 31230451 31230596 -35437409 + AluSq/x SINE Alu 1 143 -169 1072 101 0 34 chr20 31230603 31230615 -35437390 - AluSg SINE Alu -167 143 132 2635 59 0 0 chr20 31230615 31230922 -35437083 - AluY SINE Alu -4 307 1 1072 101 0 34 chr20 31230922 31231057 -35436948 - AluSg SINE Alu -178 132 1 648 125 0 0 chr20 31231061 31231157 -35436848 - AluJb SINE Alu -187 125 30 902 218 5 24 chr20 31231185 31231396 -35436609 - LTR16B LTR ERVL 0 464 258 344 174 20 61 chr20 31231407 31231505 -35436500 - LTR41 LTR ERVL -7 766 673 2258 121 7 0 chr20 31231511 31231808 -35436197 + AluSx SINE Alu 1 299 -13 2232 108 7 0 chr20 31231816 31232111 -35435894 + AluSp SINE Alu 1 297 -16 361 215 174 21 chr20 31232572 31232716 -35435289 - LTR41 LTR ERVL -607 166 1 247 325 36 24 chr20 31232716 31232799 -35435206 - LTR16B LTR ERVL -205 259 176 1857 150 41 107 chr20 31232814 31233178 -35434827 - MLT2A2 LTR ERVL 0 554 167 2088 121 4 0 chr20 31233178 31233481 -35434524 - AluSx SINE Alu 0 304 1 1857 150 41 107 chr20 31233481 31233662 -35434343 - MLT2A2 LTR ERVL -387 167 24 2546 72 3 0 chr20 31233662 31233967 -35434038 - AluY SINE Alu -5 306 1 1857 150 41 107 chr20 31233967 31233990 -35434015 - MLT2A2 LTR ERVL -530 24 1 350 343 0 66 chr20 31233992 31234158 -35433847 - LTR16B LTR ERVL -301 163 9 1878 81 24 68 chr20 31234252 31234579 -35433426 - AluSq SINE Alu 0 314 1 584 146 9 27 chr20 31234579 31234689 -35433316 - MLT1B LTR MaLR -282 108 1 1966 151 7 0 chr20 31234701 31234993 -35433012 + AluSx SINE Alu 1 294 -18 1293 247 75 77 chr20 31235173 31235504 -35432501 - MLT1G1 LTR MaLR 0 595 265 2144 115 7 0 chr20 31235504 31235792 -35432213 + AluSc SINE Alu 1 290 -19 1293 247 75 77 chr20 31235792 31235834 -35432171 - MLT1G1 LTR MaLR -330 265 224 2421 89 6 13 chr20 31235834 31236148 -35431857 - AluSx SINE Alu 0 312 1 1293 247 75 77 chr20 31236148 31236331 -35431674 - MLT1G1 LTR MaLR -371 224 39 2445 80 27 0 chr20 31236343 31236680 -35431325 - L1PA10 LINE L1 0 6168 5823 941 158 6 0 chr20 31236680 31236838 -35431167 - FRAM SINE Alu -7 159 1 650 185 0 0 chr20 31237032 31237140 -35430865 + FLAM_C SINE Alu 2 109 -34 2172 100 4 4 chr20 31237152 31237471 -35430534 - AluSc SINE Alu 0 319 1 832 161 18 60 chr20 31237471 31237530 -35430475 - L1MDa LINE L1 -6362 178 118 2165 151 0 0 chr20 31237530 31237841 -35430164 - AluSx SINE Alu -1 311 1 832 161 18 60 chr20 31237841 31237949 -35430056 - L1MDa LINE L1 -6422 118 18 850 240 40 48 chr20 31237962 31238316 -35429689 - L1MC5 LINE L1 -431 7530 7180 646 271 214 7 chr20 31238310 31238613 -35429392 + L1MC/D LINE L1 5355 5720 -2088 * 1279 174 32 9 chr20 31238613 31238831 -35429174 + AluJb SINE Alu 72 294 -18 679 267 54 47 chr20 31238987 31239245 -35428760 + LTR16C LTR ERVL 135 394 -97 577 277 161 5 chr20 31239361 31239379 -35428626 - MIR SINE MIR -1 261 247 2436 63 7 7 chr20 31239379 31239681 -35428324 + AluY SINE Alu 1 302 -9 577 277 161 5 chr20 31239681 31239886 -35428119 - MIR SINE MIR -15 247 3 29 0 0 0 chr20 31240137 31240166 -35427839 + AT_rich Low_complexity Low_complexity 1 29 0 787 151 24 0 chr20 31240216 31240342 -35427663 - FLAM_C SINE Alu -3 130 2 2398 95 0 3 chr20 31240342 31240648 -35427357 - AluSq SINE Alu -8 305 1 2174 107 13 0 chr20 31241073 31241372 -35426633 + AluSx SINE Alu 1 303 -9 2393 100 3 0 chr20 31241411 31241720 -35426285 - AluSp SINE Alu -3 310 1 2414 93 0 31 chr20 31241742 31242065 -35425940 - AluSq SINE Alu 0 313 1 2293 112 3 13 chr20 31242208 31242522 -35425483 - AluSx SINE Alu -1 311 1 1992 157 0 3 chr20 31242524 31242823 -35425182 - AluJb SINE Alu -14 298 1 782 153 0 23 chr20 31242902 31243033 -35424972 + FLAM_C SINE Alu 3 130 -3 24 0 0 0 chr20 31243118 31243142 -35424863 + AT_rich Low_complexity Low_complexity 1 24 0 2202 127 0 0 chr20 31243156 31243455 -35424550 + AluSx SINE Alu 1 299 -13 362 299 33 73 chr20 31243455 31243564 -35424441 - L1M4 LINE L1 -2200 3946 3834 2446 109 0 0 chr20 31243564 31243876 -35424129 + AluSx SINE Alu 1 312 0 362 299 33 73 chr20 31243876 31244040 -35423965 - L1M4 LINE L1 -2312 3834 3684 283 171 26 13 chr20 31244040 31244116 -35423889 + CT-rich Low_complexity Low_complexity 3 79 0 2413 64 0 3 chr20 31244137 31244449 -35423556 - AluY SINE Alu 0 312 2 2095 109 3 62 chr20 31244741 31245063 -35422942 - AluSx SINE Alu -3 309 7 2350 73 0 61 chr20 31245093 31245422 -35422583 - AluSg SINE Alu -1 309 1 24 32 0 0 chr20 31245481 31245512 -35422493 + AT_rich Low_complexity Low_complexity 1 31 0 1314 117 164 107 chr20 31245848 31246129 -35421876 + AluSx SINE Alu 1 297 -15 275 229 76 17 chr20 31246131 31246249 -35421756 + L1MC4a LINE L1 5854 5978 -1830 1949 125 18 4 chr20 31246257 31246568 -35421437 + AluJo SINE Alu 1 315 0 225 0 0 0 chr20 31246941 31246966 -35421039 + (CGGGG)n Simple_repeat Simple_repeat 4 28 0 283 330 4 33 chr20 31247174 31247312 -35420693 - MIR SINE MIR -46 162 29 211 346 77 13 chr20 31247329 31247485 -35420520 + L2 LINE L2 2620 2785 -529 227 316 12 76 chr20 31247586 31247757 -35420248 + L2 LINE L2 2937 3096 -176 261 271 199 6 chr20 31247811 31247992 -35420013 + L2 LINE L2 2443 2658 -656 1332 139 84 17 chr20 31247996 31248234 -35419771 + MER39 LTR ERV1 4 257 -450 365 271 10 11 chr20 31248234 31248328 -35419677 - L1MC4 LINE L1 -1341 6981 1995 312 137 0 0 chr20 31248328 31248379 -35419626 + (CA)n Simple_repeat Simple_repeat 2 52 0 2149 25 0 12 chr20 31248393 31248634 -35419371 - AluY SINE Alu -18 293 56 355 180 0 0 chr20 31248634 31248695 -35419310 + MER39 LTR ERV1 242 302 -405 1357 180 20 16 chr20 31248705 31248950 -35419055 + AluJo SINE Alu 51 296 -16 394 107 80 27 chr20 31248963 31249038 -35418967 + MER39 LTR ERV1 361 439 -268 552 209 31 16 chr20 31249038 31249167 -35418838 - AluJo SINE Alu -173 139 9 386 125 42 28 chr20 31249175 31249247 -35418758 + MER39 LTR ERV1 635 707 0 307 260 122 32 chr20 31249267 31249390 -35418615 + L2 LINE L2 3173 3306 -7 426 180 150 0 chr20 31249391 31249491 -35418514 + L2 LINE L2 3138 3252 -20 314 336 17 0 chr20 31249481 31249597 -35418408 - MIR3 SINE MIR -48 160 43 * 227 310 33 51 chr20 31251484 31251737 -35416268 - L2 LINE L2 -284 2988 2744 442 273 53 7 chr20 31252190 31252340 -35415665 - MIR SINE MIR -71 191 35 2321 87 17 0 chr20 31252370 31252659 -35415346 + AluSx SINE Alu 1 294 -18 270 0 0 0 chr20 31252676 31252706 -35415299 + (TG)n Simple_repeat Simple_repeat 2 31 0 288 280 121 6 chr20 31252729 31252886 -35415119 + MER102a DNA MER1_type 128 302 -28 658 249 107 21 chr20 31253129 31253500 -35414505 + L2 LINE L2 2721 3114 -199 1927 154 55 0 chr20 31253502 31253795 -35414210 - AluSx SINE Alu -3 309 1 2477 80 3 3 chr20 31253795 31254096 -35413909 - AluSp SINE Alu -12 301 1 484 182 152 0 chr20 31254100 31254199 -35413806 - FLAM_A SINE Alu -6 136 23 1968 139 3 23 chr20 31254240 31254550 -35413455 - AluJo SINE Alu -8 304 1 2074 100 54 0 chr20 31254650 31254929 -35413076 - AluSx SINE Alu -18 294 1 223 247 137 0 chr20 31254932 31255005 -35413000 + L2 LINE L2 3149 3231 -41 190 250 50 0 chr20 31255031 31255071 -35412934 - L2 LINE L2 -10 3303 3262 * 309 309 242 11 chr20 31255038 31255216 -35412789 - MIR SINE MIR -13 249 31 200 297 11 66 chr20 31256391 31256482 -35411523 - MIR SINE MIR -85 123 38 182 286 238 0 chr20 31256799 31256862 -35411143 - L2 LINE L2 -46 3267 3190 516 191 139 0 chr20 31256863 31256978 -35411027 + MER106A DNA MER1_type 5 135 -101 310 124 79 79 chr20 31257074 31257163 -35410842 - L1MC4 LINE L1 -1339 6703 6615 448 144 45 45 chr20 31257164 31257275 -35410730 + MER106B DNA MER1_type 949 1059 0 232 183 83 0 chr20 31257361 31257374 -35410631 - L2 LINE L2 -329 2984 2973 2273 122 3 0 chr20 31257374 31257670 -35410335 + AluSq SINE Alu 1 297 -16 232 183 83 0 chr20 31257670 31257716 -35410289 - L2 LINE L2 -340 2973 2920 188 270 68 27 chr20 31257733 31257807 -35410198 + L2 LINE L2 3111 3187 -85 721 183 36 22 chr20 31258050 31258187 -35409818 - FLAM_C SINE Alu 0 143 5 267 231 92 0 chr20 31258192 31258257 -35409748 + MIR SINE MIR 60 130 -78 2204 121 0 7 chr20 31258260 31258565 -35409440 - AluSx SINE Alu -9 303 1 1440 153 21 59 chr20 31258589 31258877 -35409128 + AluJo SINE Alu 36 312 0 241 248 19 105 chr20 31259039 31259144 -35408861 + L2 LINE L2 3177 3272 0 308 281 237 0 chr20 31259148 31259287 -35408718 - MIR SINE MIR -71 191 20 482 345 46 0 chr20 31259411 31259649 -35408356 - MIR SINE MIR -11 251 3 193 288 83 91 chr20 31259711 31259786 -35408219 - MIR SINE MIR -117 145 70 1755 177 0 20 chr20 31259786 31260085 -35407920 + AluJb SINE Alu 9 301 -11 193 288 83 91 chr20 31260085 31260141 -35407864 - MIR SINE MIR -192 70 15 182 250 91 0 chr20 31261406 31261450 -35406555 - L2 LINE L2 -15 3257 3210 * 1002 252 9 9 chr20 31261417 31261639 -35406366 - MIR SINE MIR -24 238 17 345 284 65 65 chr20 31261988 31262157 -35405848 - L3 LINE CR1 -99 1478 1310 398 175 26 143 chr20 31262334 31262374 -35405631 + MIR SINE MIR 127 170 -92 2318 113 0 7 chr20 31262374 31262675 -35405330 - AluSx SINE Alu -13 299 1 398 175 26 143 chr20 31262675 31262788 -35405217 + MIR SINE MIR 170 262 0 189 314 157 43 chr20 31262860 31263070 -35404935 + L2 LINE L2 2866 3099 -173 273 250 113 106 chr20 31263482 31263642 -35404363 + MIR3 SINE MIR 21 181 -27 192 262 0 49 chr20 31264186 31264247 -35403758 - MIR SINE MIR -134 74 17 220 247 108 32 chr20 31264554 31264647 -35403358 - MIR SINE MIR -72 136 37 * 377 360 58 0 chr20 31264643 31264815 -35403190 + MIR SINE MIR 30 211 -51 2022 104 0 75 chr20 31264865 31265172 -35402833 - AluSx SINE Alu -28 284 1 305 276 89 24 chr20 31265282 31265405 -35402600 - MIR SINE MIR -64 198 68 1393 216 122 59 chr20 31265855 31266558 -35401447 - L2 LINE L2 0 3313 2547 1466 203 37 7 chr20 31266558 31266829 -35401176 + AluJb SINE Alu 1 279 -33 1393 216 122 59 chr20 31266829 31266903 -35401102 - L2 LINE L2 -766 2547 2479 229 254 127 18 chr20 31266881 31266991 -35401014 + MIR3 SINE MIR 76 197 -11 * 180 97 0 0 chr20 31267317 31267348 -35400657 + (ACTG)n Simple_repeat Simple_repeat 4 34 0 190 236 55 0 chr20 31267522 31267577 -35400428 - MIR3 SINE MIR 0 208 151 1874 159 0 30 chr20 31267644 31267946 -35400059 - AluJb SINE Alu -19 293 1 1363 262 159 17 chr20 31268048 31268678 -35399327 + L2 LINE L2 2458 3227 -86 2574 80 0 0 chr20 31268678 31268991 -35399014 + AluSq SINE Alu 1 313 0 1363 262 159 17 chr20 31268991 31269093 -35398912 + L2 LINE L2 3227 3313 0 217 237 119 0 chr20 31269210 31269269 -35398736 - MIR3 SINE MIR -31 177 112 2482 77 6 10 chr20 31270312 31270624 -35397381 + AluY SINE Alu 1 311 0 457 304 31 12 chr20 31270752 31270913 -35397092 + MIR3 SINE MIR 40 203 -5 392 226 23 58 chr20 31270945 31271087 -35396918 + MIR SINE MIR 2 140 -68 353 258 92 25 chr20 31271380 31271500 -35396505 - MIR SINE MIR -115 147 20 313 344 74 6 chr20 31272053 31272216 -35395789 + MIR SINE MIR 15 188 -74 685 192 0 8 chr20 31272228 31272348 -35395657 + FLAM_C SINE Alu 2 120 -23 207 0 0 0 chr20 31272348 31272371 -35395634 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 204 200 0 0 chr20 31272385 31272420 -35395585 + L2 LINE L2 3261 3295 -18 2097 72 6 90 chr20 31272561 31272893 -35395112 + AluSc SINE Alu 1 304 -5 200 214 192 26 chr20 31272936 31273061 -35394944 + MIR SINE MIR 21 165 -43 519 206 217 33 chr20 31273091 31273275 -35394730 + MIR SINE MIR 19 236 -26 2219 128 3 3 chr20 31273353 31273702 -35394303 + AluSx SINE Alu 1 349 0 782 237 43 39 chr20 31273800 31274079 -35393926 + L1MC4a LINE L1 5587 5866 -1942 866 157 0 15 chr20 31274287 31274421 -35393584 + FLAM_C SINE Alu 1 132 -1 275 143 0 18 chr20 31274421 31274477 -35393528 + (GGGAA)n Simple_repeat Simple_repeat 2 56 0 249 197 0 45 chr20 31274514 31274580 -35393425 + G-rich Low_complexity Low_complexity 2 64 0 1055 180 10 5 chr20 31274604 31274798 -35393207 - AluSx SINE Alu -117 195 1 582 239 0 22 chr20 31274800 31274934 -35393071 - AluJo/FLAM SINE Alu -171 131 1 2294 107 0 3 chr20 31274950 31275248 -35392757 - AluSx SINE Alu -15 297 1 2298 100 7 0 chr20 31275254 31275553 -35392452 - AluSx SINE Alu -11 301 1 2471 76 0 7 chr20 31275817 31276120 -35391885 + AluSp SINE Alu 2 302 -11 1608 184 16 42 chr20 31276163 31276473 -35391532 - AluJb SINE Alu -10 302 1 412 195 119 25 chr20 31276483 31276642 -35391363 - L1MC5 LINE L1 -33 7928 7755 1175 138 0 6 chr20 31276656 31276823 -35391182 - AluSg/x SINE Alu -16 294 129 2533 79 0 13 chr20 31276949 31277265 -35390740 + AluSx SINE Alu 1 312 0 1832 117 4 4 chr20 31277355 31277651 -35390354 + AluSx SINE Alu 42 337 0 293 138 0 92 chr20 31277654 31277719 -35390286 + AluSg/x SINE Alu 137 195 -107 1011 279 113 19 chr20 31277719 31278114 -35389891 + L1ME3A LINE L1 5214 5571 -599 1036 169 11 11 chr20 31278114 31278303 -35389702 + MER5A DNA MER1_type 1 189 0 1011 279 113 19 chr20 31278303 31278567 -35389438 + L1ME3A LINE L1 5571 5937 -233 2245 103 10 16 chr20 31278576 31278711 -35389294 + AluSg SINE Alu 1 135 -175 2157 109 0 7 chr20 31278711 31279005 -35389000 + AluSg SINE Alu 1 292 -18 2245 103 10 16 chr20 31279005 31279181 -35388824 + AluSg SINE Alu 135 310 0 26 50 0 0 chr20 31279225 31279265 -35388740 + AT_rich Low_complexity Low_complexity 1 40 0 1420 179 101 15 chr20 31279268 31279536 -35388469 + AluJo SINE Alu 1 291 -21 1831 158 10 17 chr20 31279613 31279911 -35388094 - AluJo SINE Alu -10 302 7 590 276 64 60 chr20 31280701 31280880 -35387125 - MIR SINE MIR -1 261 79 602 180 74 0 chr20 31280880 31281002 -35387003 + FLAM_C SINE Alu 2 132 -1 590 276 64 60 chr20 31281002 31281072 -35386933 - MIR SINE MIR -183 79 11 1369 258 157 21 chr20 31281083 31281533 -35386472 + L2 LINE L2 2395 2782 -531 1485 182 81 27 chr20 31281533 31281829 -35386176 - AluJo SINE Alu 0 312 1 1369 258 157 21 chr20 31281829 31282032 -35385973 + L2 LINE L2 2782 2956 -357 849 169 0 0 chr20 31282032 31282162 -35385843 - FLAM_C SINE Alu -3 130 1 1369 258 157 21 chr20 31282162 31282315 -35385690 + L2 LINE L2 2956 3313 0 907 172 0 69 chr20 31282712 31282856 -35385149 + AluJo SINE Alu 1 133 -179 2335 97 17 0 chr20 31282856 31283155 -35384850 + AluSx SINE Alu 1 304 -8 907 172 0 69 chr20 31283155 31283184 -35384821 + AluJo SINE Alu 133 162 -150 246 354 77 0 chr20 31283189 31283319 -35384686 + MIR SINE MIR 117 256 -6 2495 74 0 0 chr20 31283521 31283819 -35384186 - AluY SINE Alu -13 298 1 439 260 10 0 chr20 31283822 31283926 -35384079 + MIR SINE MIR 96 200 -62 2353 112 0 0 chr20 31283975 31284270 -35383735 - AluSx SINE Alu -17 295 1 307 217 33 0 chr20 31284272 31284332 -35383673 + L2 LINE L2 2691 2752 -562 1608 196 28 11 chr20 31284333 31284618 -35383387 - AluJo SINE Alu -22 290 1 1964 166 7 3 chr20 31284620 31284922 -35383083 - AluJb SINE Alu -9 303 1 522 321 69 26 chr20 31285719 31285963 -35382042 + MIR SINE MIR 6 257 -5 617 288 33 42 chr20 31286114 31286326 -35381679 + L2 LINE L2 3104 3313 0 2352 82 3 3 chr20 31287142 31287434 -35380571 - AluSc SINE Alu -17 292 1 233 229 0 121 chr20 31287757 31287840 -35380165 + MIR SINE MIR 172 244 -18 1076 293 83 36 chr20 31287933 31288434 -35379571 - L2 LINE L2 -4 3309 2779 1712 149 3 70 chr20 31288434 31288589 -35379416 + AluSg SINE Alu 2 127 -183 1962 134 7 0 chr20 31288589 31288881 -35379124 - AluSp SINE Alu -6 307 14 1712 149 3 70 chr20 31288881 31289041 -35378964 + AluSg SINE Alu 127 296 -14 1076 293 83 36 chr20 31289041 31289116 -35378889 - L2 LINE L2 -534 2779 2709 2112 119 7 10 chr20 31289118 31289421 -35378584 - AluSq SINE Alu -11 302 1 1122 83 0 0 chr20 31289424 31289557 -35378448 - AluSq/x SINE Alu -180 133 1 2307 106 0 3 chr20 31289569 31289870 -35378135 - AluSx SINE Alu -12 300 1 2325 103 3 0 chr20 31289876 31290176 -35377829 - AluSx SINE Alu -11 301 1 2339 85 10 3 chr20 31290183 31290478 -35377527 - AluSg SINE Alu -13 297 1 213 157 0 129 chr20 31290510 31290580 -35377425 + MIR3 SINE MIR 145 205 -3 235 287 169 29 chr20 31290964 31291100 -35376905 - L2 LINE L2 -2 3270 3116 628 241 175 6 chr20 31291165 31291331 -35376674 + MIR SINE MIR 29 222 -40 679 281 23 6 chr20 31291411 31291582 -35376423 - MIR SINE MIR -74 188 15 185 256 0 0 chr20 31291610 31291649 -35376356 + L2 LINE L2 3214 3252 -20 239 211 26 66 chr20 31292463 31292539 -35375466 - MIR SINE MIR -3 259 187 346 233 129 52 chr20 31292651 31292767 -35375238 - MIR SINE MIR -70 192 68 286 315 83 33 chr20 31292875 31293056 -35374949 - MIR SINE MIR -45 217 28 253 284 15 0 chr20 31293087 31293154 -35374851 - MIR SINE MIR -16 246 179 362 281 56 104 chr20 31293476 31293575 -35374430 - MIR SINE MIR -16 246 144 2549 80 3 0 chr20 31293575 31293887 -35374118 + AluSp SINE Alu 1 313 0 362 281 56 104 chr20 31293887 31294036 -35373969 - MIR SINE MIR -118 144 10 1946 141 0 24 chr20 31295457 31295630 -35372375 - AluSx SINE Alu -29 283 118 2600 50 0 25 chr20 31295630 31295948 -35372057 + AluY SINE Alu 1 310 -1 1946 141 0 24 chr20 31295948 31296064 -35371941 - AluSx SINE Alu -194 118 1 574 225 70 35 chr20 31296188 31296330 -35371675 - L2 LINE L2 -2 3311 3165 326 272 0 29 chr20 31296337 31296440 -35371565 - L2 LINE L2 -272 3041 2942 181 275 0 0 chr20 31296432 31296472 -35371533 - MIR SINE MIR -84 178 139 * 229 186 23 0 chr20 31296473 31296516 -35371489 - MIR SINE MIR -102 160 117 353 329 123 41 chr20 31297049 31297268 -35370737 + MIR SINE MIR 26 262 0 214 299 93 21 chr20 31297593 31297690 -35370315 + L2 LINE L2 3168 3271 -1 208 248 277 0 chr20 31297771 31297872 -35370133 + MIR SINE MIR 37 165 -97 422 275 85 34 chr20 31297952 31298106 -35369899 + MIR SINE MIR 22 185 -61 234 338 0 13 chr20 31298109 31298186 -35369819 + MIR SINE MIR 16 91 -171 1095 188 15 5 chr20 31298358 31298560 -35369445 + MIR SINE MIR 59 262 0 254 276 0 0 chr20 31299880 31299938 -35368067 - MIR SINE MIR -97 111 54 318 257 40 51 chr20 31299938 31300096 -35367909 + MIR SINE MIR 58 212 -50 336 278 83 9 chr20 31300302 31300410 -35367595 - MIR3 SINE MIR -45 163 48 198 271 248 23 chr20 31300627 31300756 -35367249 - MIR SINE MIR -60 202 45 422 247 275 64 chr20 31300958 31301071 -35366934 + L2 LINE L2 2550 2638 -675 2410 75 7 0 chr20 31301071 31301366 -35366639 + AluY SINE Alu 1 297 -14 422 247 275 64 chr20 31301366 31301651 -35366354 + L2 LINE L2 2638 3026 -287 1031 155 130 5 chr20 31301669 31301876 -35366129 + MER34C LTR ERV1 1 233 -352 970 140 0 43 chr20 31301910 31302074 -35365931 - AluJb SINE Alu -12 300 144 525 186 93 73 chr20 31302141 31302345 -35365660 + LTR48 LTR ERV1 580 787 0 793 230 84 54 chr20 31302345 31302606 -35365399 + L2 LINE L2 3045 3313 0 227 341 71 0 chr20 31302694 31302779 -35365226 - L2 LINE L2 -23 3249 3159 436 263 102 38 chr20 31302788 31302974 -35365031 - L3 LINE CR1 -176 1401 1204 2374 85 3 0 chr20 31304452 31304758 -35363247 + AluSp SINE Alu 1 307 -6 203 343 10 40 chr20 31305022 31305121 -35362884 + MIR SINE MIR 11 106 -156 265 299 124 0 chr20 31305206 31305303 -35362702 + L2 LINE L2 3204 3312 -1 239 233 0 0 chr20 31305302 31305345 -35362660 + L2 LINE L2 3210 3252 -20 * 360 300 0 11 chr20 31306755 31306845 -35361160 - MIR SINE MIR -62 146 58 224 77 26 0 chr20 31310184 31310223 -35357782 + (CAGT)n Simple_repeat Simple_repeat 4 43 0 514 213 39 31 chr20 31310307 31310434 -35357571 + MIR SINE MIR 91 218 -44 1602 55 0 5 chr20 31310434 31310636 -35357369 + AluSx SINE Alu 1 201 -111 339 249 78 78 chr20 31310674 31310879 -35357126 - L1MC/D LINE L1 -2288 5520 5316 2118 114 0 13 chr20 31310909 31311225 -35356780 - AluSx SINE Alu 0 312 1 1722 152 20 3 chr20 31311225 31311522 -35356483 - AluJb SINE Alu -10 302 1 2243 84 3 0 chr20 31311532 31311829 -35356176 - AluSg SINE Alu -12 298 1 973 132 63 181 chr20 31312408 31312756 -35355249 - AluYb8 SINE Alu 0 308 2 2046 128 0 0 chr20 31312801 31313097 -35354908 + AluSg SINE Alu 1 296 -14 1518 160 3 69 chr20 31313108 31313426 -35354579 + AluJb SINE Alu 1 297 -15 228 235 94 0 chr20 31313428 31313513 -35354492 + L1ME3A LINE L1 5853 5945 -225 509 255 21 28 chr20 31313529 31313670 -35354335 + MLT1F1 LTR MaLR 1 140 -402 1367 126 19 5 chr20 31313696 31313910 -35354095 - AluJb SINE Alu -11 301 85 2265 89 0 16 chr20 31313954 31314267 -35353738 + AluY SINE Alu 1 308 -3 812 146 230 34 chr20 31314272 31314552 -35353453 + MLT1F1 LTR MaLR 163 560 -7 1701 166 28 0 chr20 31314616 31314906 -35353099 + AluSx SINE Alu 1 298 -14 2169 112 0 6 chr20 31315042 31315354 -35352651 + AluSg SINE Alu 1 310 0 771 159 0 29 chr20 31315602 31315740 -35352265 - L1PB3 LINE L1 -13 6141 6008 1979 117 31 3 chr20 31315780 31316071 -35351934 + AluSx SINE Alu 1 299 -13 1325 147 4 38 chr20 31316204 31316442 -35351563 - AluJo SINE Alu -10 302 73 2274 88 3 0 chr20 31316483 31316779 -35351226 + AluSx SINE Alu 1 297 -15 2380 68 0 0 chr20 31316780 31317076 -35350929 + AluY SINE Alu 1 296 -15 1503 191 93 31 chr20 31317080 31317435 -35350570 - LTR48 LTR ERV1 -410 377 1 698 173 0 0 chr20 31317517 31317627 -35350378 - AluJb SINE Alu -11 301 192 863 209 0 0 chr20 31317906 31318069 -35349936 - AluJb SINE Alu -17 295 133 2221 81 7 0 chr20 31318177 31318474 -35349531 + AluSx SINE Alu 3 301 -11 2163 111 7 0 chr20 31318526 31318833 -35349172 - AluSq SINE Alu -4 309 1 863 300 21 8 chr20 31318999 31319242 -35348763 + MIR SINE MIR 13 258 -4 2220 69 7 0 chr20 31319329 31319617 -35348388 - AluSq SINE Alu -23 290 1 365 260 136 30 chr20 31319629 31319798 -35348207 - L1MC4a LINE L1 -1926 5882 5696 210 266 47 0 chr20 31319858 31319922 -35348083 + MIR3 SINE MIR 142 208 0 189 74 0 0 chr20 31320084 31320111 -35347894 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 753 212 12 35 chr20 31320387 31320557 -35347448 + L2 LINE L2 3129 3294 -19 2009 117 17 0 chr20 31320674 31320974 -35347031 + AluSq SINE Alu 1 305 -8 955 165 0 6 chr20 31320974 31321138 -35346867 + AluSg/x SINE Alu 132 294 -16 382 211 119 0 chr20 31321188 31321314 -35346691 - L1MC4a LINE L1 -657 5507 5366 1668 136 0 78 chr20 31321315 31321497 -35346508 - AluJb SINE Alu -6 306 160 2186 114 0 0 chr20 31321497 31321805 -35346200 - AluSg SINE Alu -2 308 1 1668 136 0 78 chr20 31321805 31321954 -35346051 - AluJb SINE Alu -152 160 1 1546 176 75 4 chr20 31321984 31322262 -35345743 - AluJo SINE Alu -3 299 2 2247 86 3 0 chr20 31322345 31322647 -35345358 - AluSp SINE Alu -9 304 2 2412 51 0 7 chr20 31322655 31322951 -35345054 - AluY SINE Alu -17 294 1 823 155 20 7 chr20 31322980 31323128 -35344877 + AluJb SINE Alu 148 297 -15 866 122 0 0 chr20 31323158 31323281 -35344724 - AluSg/x SINE Alu -21 289 167 558 197 72 54 chr20 31323308 31323531 -35344474 - L1MC5 LINE L1 -48 7913 7687 1782 125 40 3 chr20 31323538 31323835 -35344170 + AluSq SINE Alu 6 313 0 310 143 95 12 chr20 31323863 31323947 -35344058 - L1MC5 LINE L1 -491 7470 7380 2164 92 0 16 chr20 31324130 31324433 -35343572 - AluSx SINE Alu -14 298 1 530 222 0 0 chr20 31324545 31324653 -35343352 - FLAM_A SINE Alu -34 108 1 284 321 46 9 chr20 31324686 31324795 -35343210 + MIR SINE MIR 40 152 -110 267 273 68 53 chr20 31325747 31325879 -35342126 - MIR SINE MIR -42 220 87 197 309 18 0 chr20 31326905 31326960 -35341045 + L2 LINE L2 3250 3305 -8 2157 111 0 13 chr20 31327378 31327557 -35340448 - AluSx SINE Alu 0 312 137 2140 103 0 10 chr20 31327557 31327857 -35340148 - AluSc SINE Alu -12 297 1 2157 111 0 13 chr20 31327857 31327993 -35340012 - AluSx SINE Alu -175 137 1 2161 92 7 13 chr20 31328253 31328556 -35339449 - AluSx SINE Alu -11 301 1 404 219 136 16 chr20 31328799 31328943 -35339062 - L1ME4a LINE L1 -12 6109 5984 1959 143 3 63 chr20 31328943 31329011 -35338994 + MER2 DNA MER2_type 2 73 -271 1899 124 38 3 chr20 31329011 31329301 -35338704 + AluSx SINE Alu 1 300 -12 1959 143 3 63 chr20 31329301 31329482 -35338523 + MER2 DNA MER2_type 73 263 -81 1510 169 10 34 chr20 31329482 31329778 -35338227 + AluJo SINE Alu 1 289 -23 1959 143 3 63 chr20 31329778 31329805 -35338200 + MER2 DNA MER2_type 263 290 -54 2209 85 20 0 chr20 31329805 31330099 -35337906 - AluSp SINE Alu -13 300 1 1959 143 3 63 chr20 31330099 31330185 -35337820 + MER2 DNA MER2_type 290 344 0 404 219 136 16 chr20 31330185 31330228 -35337777 - L1ME4a LINE L1 -137 5984 5948 2204 68 13 13 chr20 31330228 31330535 -35337470 - AluSg SINE Alu -3 307 1 404 219 136 16 chr20 31330535 31330588 -35337417 - L1ME4a LINE L1 -173 5948 5839 1076 152 0 37 chr20 31330592 31330783 -35337222 - AluJb SINE Alu 0 312 129 266 244 52 96 chr20 31330847 31330882 -35337123 - L1ME4a LINE L1 -485 5636 5601 2127 92 10 13 chr20 31330882 31331185 -35336820 + AluSq SINE Alu 1 302 -11 266 244 52 96 chr20 31331185 31331264 -35336741 - L1ME4a LINE L1 -520 5601 5527 2130 104 7 0 chr20 31331407 31331696 -35336309 - AluSx SINE Alu -11 301 11 2078 94 13 3 chr20 31333197 31333496 -35334509 - AluSg SINE Alu -8 302 1 309 109 0 0 chr20 31333515 31333561 -35334444 + (TCTG)n Simple_repeat Simple_repeat 3 48 0 180 0 0 0 chr20 31333848 31333868 -35334137 + (T)n Simple_repeat Simple_repeat 1 20 0 387 278 60 103 chr20 31334730 31334982 -35333023 + MIR SINE MIR 21 261 -1 2447 53 0 3 chr20 31335025 31335324 -35332681 - AluY SINE Alu -13 298 1 1027 270 25 0 chr20 31335351 31335592 -35332413 + MIR SINE MIR 13 259 -3 2175 94 7 3 chr20 31335592 31335890 -35332115 + AluSq SINE Alu 1 299 -14 38 22 0 0 chr20 31335985 31336030 -35331975 + AT_rich Low_complexity Low_complexity 1 45 0 1476 92 10 0 chr20 31336030 31336237 -35331768 - AluSg/x SINE Alu -25 285 77 2213 85 14 0 chr20 31336237 31336531 -35331474 - AluSp SINE Alu -14 299 2 387 0 0 0 chr20 31336531 31336574 -35331431 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 1333 90 63 11 chr20 31336574 31336763 -35331242 - AluSg/x SINE Alu -30 280 82 198 0 0 0 chr20 31336975 31336997 -35331008 + (TTG)n Simple_repeat Simple_repeat 3 24 0 915 179 0 0 chr20 31337004 31337155 -35330850 - AluJo/FRAM SINE Alu -30 282 132 416 176 49 39 chr20 31337157 31337259 -35330746 + FLAM_A SINE Alu 40 142 0 2187 104 0 0 chr20 31337832 31338121 -35329884 - AluSq SINE Alu -24 289 1 316 277 60 76 chr20 31338276 31338460 -35329545 - MLT1J LTR MaLR -203 308 128 2137 100 3 7 chr20 31338692 31338992 -35329013 - AluY SINE Alu -12 299 1 448 296 107 22 chr20 31339308 31339538 -35328467 + MIR SINE MIR 3 252 -10 2242 100 0 0 chr20 31339822 31340132 -35327873 + AluSx SINE Alu 1 310 -2 1814 109 67 0 chr20 31340175 31340459 -35327546 - AluSx SINE Alu -9 303 1 435 243 201 19 chr20 31340713 31340927 -35327078 + L1ME4a LINE L1 5615 5867 -254 2014 119 0 3 chr20 31341023 31341326 -35326679 - AluY SINE Alu -9 302 1 1050 70 0 0 chr20 31341329 31341457 -35326548 - AluSq/x SINE Alu -180 133 6 1861 109 67 0 chr20 31341576 31341859 -35326146 + AluSx SINE Alu 1 302 -10 324 282 127 50 chr20 31342173 31342230 -35325775 - L2 LINE L2 -8 3305 3254 219 36 0 0 chr20 31342230 31342258 -35325747 + (TGGA)n Simple_repeat Simple_repeat 3 30 0 324 282 127 50 chr20 31342258 31342381 -35325624 - L2 LINE L2 -59 3254 3111 30 48 0 16 chr20 31342657 31342690 -35325315 + AT_rich Low_complexity Low_complexity 1 34 -27 2105 118 0 9 chr20 31342690 31343005 -35325000 - AluSq SINE Alu -1 312 1 30 48 0 16 chr20 31343005 31343033 -35324972 + AT_rich Low_complexity Low_complexity 34 61 0 615 186 51 0 chr20 31343168 31343286 -35324719 - FLAM_C SINE Alu -9 124 1 693 211 120 6 chr20 31344012 31344187 -35323818 - L1MD2 LINE L1 -133 6226 6032 2053 113 10 3 chr20 31344198 31344498 -35323507 - AluSx SINE Alu -10 302 1 2139 106 3 10 chr20 31345465 31345776 -35322229 - AluSc SINE Alu 0 309 1 1274 178 116 29 chr20 31346461 31346736 -35321269 - AluJo SINE Alu -1 301 3 326 0 0 0 chr20 31346909 31346944 -35321061 + U2 snRNA snRNA 1 35 -153 598 188 46 30 chr20 31347058 31347265 -35320740 - L1MB7 LINE L1 0 6184 5981 2193 103 0 3 chr20 31347276 31347578 -35320427 - AluSg SINE Alu -9 301 1 3883 161 39 78 chr20 31347580 31348414 -35319591 - L1MA5 LINE L1 -394 5906 5041 2095 124 0 6 chr20 31348414 31348728 -35319277 - AluSx SINE Alu 0 312 1 3883 161 39 78 chr20 31348728 31348887 -35319118 - L1MA5 LINE L1 -1259 5041 4877 491 196 0 21 chr20 31348887 31348984 -35319021 - FLAM_C SINE Alu -12 131 37 3883 161 39 78 chr20 31348984 31349264 -35318741 - L1MA5 LINE L1 -1423 4877 4641 2162 105 0 0 chr20 31349264 31349558 -35318447 - AluSq SINE Alu -19 294 1 589 233 76 6 chr20 31349589 31349761 -35318244 - L1MEc LINE L1 -3549 2666 2483 262 0 0 50 chr20 31349763 31349803 -35318202 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 2186 99 0 3 chr20 31349816 31350109 -35317896 + AluSg SINE Alu 1 292 -18 244 277 0 12 chr20 31350133 31350216 -35317789 - L1MC4 LINE L1 -1347 6695 6614 241 294 0 33 chr20 31350137 31350229 -35317776 + L1MC4 LINE L1 6614 6702 -1340 * 1814 147 7 0 chr20 31350261 31350546 -35317459 - AluJb SINE Alu -25 287 1 564 231 192 14 chr20 31350549 31350757 -35317248 - L1MEc LINE L1 -3874 2522 2278 1024 169 0 5 chr20 31351020 31351204 -35316801 - AluJb SINE Alu 0 312 130 751 148 7 90 chr20 31351256 31351411 -35316594 + FLAM_C SINE Alu 2 143 0 587 191 0 0 chr20 31351548 31351658 -35316347 - FLAM_A SINE Alu -2 140 31 955 299 37 8 chr20 31351999 31352401 -35315604 - HAL1 LINE L1 -721 1786 1373 240 226 32 0 chr20 31352438 31352500 -35315505 - Charlie8 DNA MER1_type -1641 776 713 378 0 0 0 chr20 31352533 31352575 -35315430 + (TG)n Simple_repeat Simple_repeat 2 43 0 2369 85 3 10 chr20 31352874 31353180 -35314825 - AluSq SINE Alu -9 304 1 277 278 139 21 chr20 31353238 31353382 -35314623 - MIR SINE MIR -77 185 25 1007 156 17 82 chr20 31353449 31353680 -35314325 - AluJo SINE Alu -12 300 85 1815 172 7 10 chr20 31353628 31353931 -35314074 - AluJb SINE Alu -10 302 1 225 254 0 56 chr20 31353932 31354003 -35314002 - L1MEc LINE L1 -5674 531 465 1858 168 0 7 chr20 31354014 31354311 -35313694 - AluJb SINE Alu -16 296 2 2300 60 7 33 chr20 31354322 31354623 -35313382 - AluY SINE Alu -18 293 1 582 259 92 43 chr20 31354625 31355014 -35312991 + L1P1 LINE L1 5083 5493 -662 * 634 247 39 18 chr20 31354982 31355195 -35312810 + L1ME3A LINE L1 5709 5932 -230 838 30 0 0 chr20 31355197 31355297 -35312708 + L1PA3 LINE L1 6056 6155 0 2522 52 0 20 chr20 31355397 31355702 -35312303 - AluY SINE Alu -12 299 1 1602 196 3 10 chr20 31355882 31356178 -35311827 - AluJo SINE Alu -18 294 1 23 0 0 0 chr20 31356379 31356402 -35311603 + AT_rich Low_complexity Low_complexity 1 23 0 276 292 79 75 chr20 31357053 31357358 -35310647 - MLT1J LTR MaLR -203 308 3 28 0 0 0 chr20 31357915 31357943 -35310062 + AT_rich Low_complexity Low_complexity 1 28 0 1624 171 10 48 chr20 31357943 31358098 -35309907 - AluJb SINE Alu -25 287 147 2341 110 0 0 chr20 31358098 31358399 -35309606 - AluSx SINE Alu -11 301 1 1624 171 10 48 chr20 31358399 31358535 -35309470 - AluJb SINE Alu -165 147 7 398 281 129 13 chr20 31358826 31359050 -35308955 - L1ME LINE L1 -338 5783 5534 2318 99 6 29 chr20 31359050 31359222 -35308783 - AluSx SINE Alu -7 305 142 2316 111 3 0 chr20 31359222 31359529 -35308476 - AluSx SINE Alu -4 308 1 2318 99 6 29 chr20 31359529 31359668 -35308337 - AluSx SINE Alu -170 142 1 1115 190 67 33 chr20 31359795 31359949 -35308056 - L1MA7 LINE L1 0 6291 6144 2245 107 10 0 chr20 31359949 31360247 -35307758 - AluSq SINE Alu -12 301 1 1115 190 67 33 chr20 31360247 31360392 -35307613 - L1MA7 LINE L1 -147 6144 5982 339 276 99 50 chr20 31360574 31360755 -35307250 - MIR SINE MIR -16 246 57 749 211 0 0 chr20 31360849 31360982 -35307023 - FLAM_A SINE Alu 0 133 1 2224 95 7 0 chr20 31361025 31361336 -35306669 - AluSx SINE Alu 0 312 1 2208 129 3 0 chr20 31361443 31361754 -35306251 - AluSx SINE Alu 0 312 1 2973 13 0 0 chr20 31362140 31362458 -35305547 - AluYb8 SINE Alu 0 318 1 2278 111 0 3 chr20 31362598 31362905 -35305100 - AluSq SINE Alu -7 306 1 2312 102 7 0 chr20 31363859 31364153 -35303852 - AluSq SINE Alu -17 296 1 205 290 139 23 chr20 31365718 31365977 -35302028 - L2 LINE L2 -1619 1695 1407 2056 121 0 24 chr20 31366133 31366430 -35301575 - AluSx SINE Alu -22 290 1 21 0 0 0 chr20 31366439 31366460 -35301545 + AT_rich Low_complexity Low_complexity 1 21 0 198 0 0 0 chr20 31366973 31366995 -35301010 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 1720 181 0 14 chr20 31366998 31367290 -35300715 - AluJo SINE Alu -12 300 13 2431 64 0 29 chr20 31367332 31367643 -35300362 - AluY SINE Alu -9 302 1 1955 147 10 7 chr20 31367738 31368031 -35299974 + AluJb SINE Alu 1 294 -18 1715 130 63 19 chr20 31368684 31368953 -35299052 + AluJb SINE Alu 1 281 -31 462 36 0 0 chr20 31368955 31369011 -35298994 + (CA)n Simple_repeat Simple_repeat 1 56 0 2287 112 3 0 chr20 31369317 31369629 -35298376 - AluSq SINE Alu 0 313 1 779 221 84 4 chr20 31370368 31370594 -35297411 - MIR SINE MIR -1 261 18 2374 91 0 0 chr20 31371569 31371876 -35296129 - AluSq SINE Alu -6 307 1 418 214 107 25 chr20 31371938 31372097 -35295908 + MER113 DNA MER1_type? 21 192 -329 917 214 41 37 chr20 31372104 31372347 -35295658 - MIR SINE MIR 0 262 19 1913 148 7 26 chr20 31372479 31372782 -35295223 - AluSx SINE Alu -15 297 1 343 301 98 7 chr20 31373149 31373292 -35294713 - MIR SINE MIR 0 262 107 2331 134 166 60 chr20 31373558 31374155 -35293850 - MER4A LTR ERV1 -4 660 1 2375 82 7 10 chr20 31374213 31374518 -35293487 + AluSx SINE Alu 1 304 -8 509 271 100 40 chr20 31375156 31375407 -35292598 + L2 LINE L2 3022 3287 -26 218 361 82 10 chr20 31375442 31375539 -35292466 - L2 LINE L2 -40 3232 3129 252 328 94 16 chr20 31375974 31376102 -35291903 - MIR3 SINE MIR -18 190 53 309 291 55 16 chr20 31376306 31376433 -35291572 + MARNA DNA Mariner 31 162 -424 * 646 297 104 34 chr20 31376319 31376733 -35291272 - MARNA DNA Mariner -41 545 103 348 333 91 67 chr20 31376791 31377241 -35290764 - L2 LINE L2 -3 3269 2809 2519 58 0 3 chr20 31377367 31377662 -35290343 - AluY SINE Alu -17 294 1 1541 169 110 0 chr20 31378185 31378458 -35289547 + AluJb SINE Alu 1 303 -9 870 119 8 0 chr20 31378608 31378726 -35289279 + FLAM_C SINE Alu 1 119 -24 278 316 0 0 chr20 31380263 31380342 -35287663 - MIR SINE MIR -88 120 42 903 231 14 19 chr20 31380751 31380834 -35287171 - MER58C DNA MER1_type -2205 215 133 411 21 0 0 chr20 31380834 31380882 -35287123 + (TG)n Simple_repeat Simple_repeat 2 49 0 903 231 14 19 chr20 31380882 31380893 -35287112 - MER58C DNA MER1_type -2287 133 123 2261 94 0 3 chr20 31380893 31381199 -35286806 - AluY SINE Alu 0 305 1 903 231 14 19 chr20 31381199 31381214 -35286791 - MER58C DNA MER1_type -2297 123 109 2269 112 0 0 chr20 31381214 31381508 -35286497 - AluSx SINE Alu -14 298 5 903 231 14 19 chr20 31381508 31381611 -35286394 - MER58C DNA MER1_type -2311 109 1 1230 223 99 85 chr20 31382210 31382879 -35285126 - L1MC5 LINE L1 -49 7912 7235 988 85 0 0 chr20 31382929 31383070 -35284935 - L1MA5A LINE L1 -2 6295 6155 764 22 0 0 chr20 31383101 31383192 -35284813 + L1PA4 LINE L1 6063 6153 -2 827 118 0 39 chr20 31383995 31384122 -35283883 + FLAM_C SINE Alu 3 124 -9 22 35 0 0 chr20 31385027 31385056 -35282949 + AT_rich Low_complexity Low_complexity 1 29 0 935 157 45 122 chr20 31385381 31385693 -35282312 + L1MA8 LINE L1 6003 6290 -1 2302 88 13 7 chr20 31385696 31386003 -35282002 + AluSx SINE Alu 1 309 -3 720 188 0 29 chr20 31386043 31386181 -35281824 + FLAM_C SINE Alu 1 134 -9 2452 57 0 17 chr20 31387975 31388272 -35279733 - AluY SINE Alu -19 292 1 2253 93 10 3 chr20 31388417 31388707 -35279298 - AluSx SINE Alu -20 292 1 2453 75 0 0 chr20 31388793 31389087 -35278918 - AluY SINE Alu -17 294 1 339 111 0 0 chr20 31389569 31389614 -35278391 - MER2 DNA MER2_type -300 45 1 452 158 30 40 chr20 31389625 31389726 -35278279 - L2 LINE L2 -46 3267 3168 557 254 32 55 chr20 31389756 31389976 -35278029 - L2 LINE L2 -625 2689 2475 310 145 14 87 chr20 31390244 31390313 -35277692 - L1MEc LINE L1 -6265 131 68 2130 100 38 3 chr20 31390834 31391125 -35276880 - AluSx SINE Alu -11 301 1 2033 106 42 0 chr20 31391267 31391550 -35276455 - AluSp SINE Alu -17 296 2 22 35 0 0 chr20 31391870 31391899 -35276106 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr20 31393382 31393404 -35274601 + AT_rich Low_complexity Low_complexity 1 22 0 357 186 0 0 chr20 31393832 31393902 -35274103 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 2381 102 0 0 chr20 31393905 31394209 -35273796 - AluSg SINE Alu -6 304 1 2287 90 0 0 chr20 31395211 31395490 -35272515 + AluSg SINE Alu 1 279 -31 276 30 0 0 chr20 31395493 31395526 -35272479 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 204 238 48 48 chr20 31395601 31395664 -35272341 + MIR SINE MIR 82 144 -118 240 217 163 54 chr20 31396323 31396415 -35271590 + MIR3 SINE MIR 78 179 -29 240 88 0 0 chr20 31396730 31396764 -35271241 + MLT1E2 LTR MaLR 590 623 -3 1899 86 112 11 chr20 31396846 31397113 -35270892 - AluSg SINE Alu -16 294 1 929 206 27 0 chr20 31397273 31397457 -35270548 + MER5A DNA MER1_type 1 189 0 473 226 21 17 chr20 31397764 31397897 -35270108 - MIR SINE MIR -64 144 8 674 251 183 0 chr20 31398933 31399152 -35268853 + MIR SINE MIR 4 262 0 2090 130 0 32 chr20 31399375 31399690 -35268315 + AluSx SINE Alu 1 305 -7 538 262 41 41 chr20 31399736 31399908 -35268097 - MER5B DNA MER1_type 0 178 7 244 256 26 26 chr20 31400049 31400127 -35267878 - MER5A DNA MER1_type -2 187 110 2188 132 0 0 chr20 31400136 31400446 -35267559 - AluSx SINE Alu -2 310 1 1745 160 0 14 chr20 31400790 31401078 -35266927 - AluJb SINE Alu -11 301 18 185 71 0 119 chr20 31402359 31402401 -35265604 + MIR SINE MIR 111 147 -115 327 227 61 44 chr20 31402756 31402957 -35265048 + MIR SINE MIR 48 255 -7 301 376 65 2 chr20 31403360 31403562 -35264443 + MIR SINE MIR 21 239 -23 608 310 90 10 chr20 31403584 31403784 -35264221 + MIR SINE MIR 47 262 0 380 265 34 49 chr20 31404068 31404294 -35263711 - L1MC4a LINE L1 -1802 6006 5784 796 166 0 43 chr20 31404438 31404577 -35263428 - FLAM_C SINE Alu 0 133 1 219 208 0 57 chr20 31405364 31405417 -35262588 + C-rich Low_complexity Low_complexity 4 53 0 811 203 0 0 chr20 31407998 31408131 -35259874 - FLAM_A SINE Alu 0 133 1 285 268 102 39 chr20 31408174 31408301 -35259704 - MIR SINE MIR -110 152 18 342 303 82 0 chr20 31410695 31410817 -35257188 - L2 LINE L2 -8 3264 3133 353 324 79 23 chr20 31410962 31411178 -35256827 - L2 LINE L2 -147 3125 2898 199 372 0 0 chr20 31411352 31411430 -35256575 + L2 LINE L2 3173 3250 -22 619 231 40 100 chr20 31411462 31411783 -35256222 - L2 LINE L2 -9 3304 3003 369 264 0 56 chr20 31411828 31411953 -35256052 + MER63 DNA MER1_type 13 756 -306 939 308 38 53 chr20 31411974 31412558 -35255447 - L2 LINE L2 -706 2608 2034 207 259 0 0 chr20 31413084 31413138 -35254867 + (TCCA)n Simple_repeat Simple_repeat 2 55 0 246 318 24 48 chr20 31413139 31413265 -35254740 - L2 LINE L2 -1 3312 3190 535 208 0 25 chr20 31413403 31413523 -35254482 - L2 LINE L2 0 3313 3197 2289 95 0 0 chr20 31413601 31413897 -35254108 - AluSx SINE Alu -16 296 1 2236 102 0 7 chr20 31413961 31414266 -35253739 - AluSx SINE Alu -9 303 1 330 273 180 0 chr20 31414519 31414647 -35253358 - L2 LINE L2 -1 3271 3121 640 268 75 26 chr20 31414903 31415168 -35252837 - L2 LINE L2 -638 2676 2399 408 293 100 50 chr20 31415631 31415870 -35252135 - MER102b DNA MER1_type -14 327 77 187 266 64 73 chr20 31415880 31415989 -35252016 - MIR3 SINE MIR -36 172 65 187 291 103 51 chr20 31415963 31416080 -35251925 - L2 LINE L2 -2 3270 3148 425 259 29 43 chr20 31416138 31416277 -35251728 + MIR SINE MIR 33 169 -93 469 259 34 34 chr20 31417484 31417631 -35250374 - MIR SINE MIR -39 223 77 1182 250 70 14 chr20 31418446 31418566 -35249439 - L2 LINE L2 -2 3311 3199 2196 112 7 0 chr20 31418566 31418869 -35249136 - AluSg SINE Alu -5 305 1 1182 250 70 14 chr20 31418869 31418964 -35249041 - L2 LINE L2 -114 3199 3111 1513 169 81 18 chr20 31418964 31419248 -35248757 - AluJo SINE Alu -10 302 1 1182 250 70 14 chr20 31419248 31419585 -35248420 - L2 LINE L2 -202 3111 2724 228 289 35 53 chr20 31420882 31420996 -35247009 + MIR SINE MIR 51 162 -100 * 346 317 10 10 chr20 31420983 31421087 -35246918 - MIR SINE MIR 0 262 159 195 42 0 0 chr20 31421087 31421111 -35246894 + (ATTG)n Simple_repeat Simple_repeat 2 25 0 604 124 0 41 chr20 31421114 31421211 -35246794 - AluSg/x SINE Alu -32 280 188 265 170 57 0 chr20 31421211 31421264 -35246741 - MIR SINE MIR -98 164 109 184 321 0 37 chr20 31421274 31421355 -35246650 + MIR SINE MIR 153 230 -32 375 277 74 1 chr20 31421361 31421483 -35246522 - MIR SINE MIR -62 146 31 613 297 95 22 chr20 31421820 31422052 -35245953 - MIR SINE MIR -1 261 13 347 204 168 0 chr20 31422526 31422639 -35245366 - MIR3 SINE MIR -72 136 5 199 189 0 0 chr20 31422619 31422656 -35245349 + MIR SINE MIR 116 152 -110 * 347 200 29 0 chr20 31422729 31422799 -35245206 - MIR SINE MIR -62 146 75 663 282 97 0 chr20 31423789 31423995 -35244010 - MIR SINE MIR -2 260 35 301 322 163 44 chr20 31424003 31424413 -35243592 - L2 LINE L2 -3 3269 2811 378 233 33 0 chr20 31424667 31424757 -35243248 + MIR SINE MIR 100 192 -70 452 261 314 12 chr20 31424796 31425137 -35242868 - L2 LINE L2 -5 3308 2865 2276 84 3 3 chr20 31425188 31425485 -35242520 - AluSx SINE Alu -15 297 1 492 330 137 17 chr20 31425531 31425882 -35242123 - L2 LINE L2 0 3313 2921 523 237 14 26 chr20 31426296 31426461 -35241544 - MIR SINE MIR -61 147 19 2162 128 0 0 chr20 31426572 31426878 -35241127 - AluSx SINE Alu -6 306 1 855 185 43 22 chr20 31426878 31427062 -35240943 - MIR SINE MIR -6 256 69 206 283 206 72 chr20 31427468 31427648 -35240357 + L3 LINE CR1 1371 1574 -3 283 265 12 0 chr20 31427921 31428004 -35240001 + MIR SINE MIR 62 145 -117 181 365 24 12 chr20 31428274 31428359 -35239646 - MIR SINE MIR -72 136 51 290 149 39 78 chr20 31431951 31432105 -35235900 + (CAGAGA)n Simple_repeat Simple_repeat 5 152 0 798 165 0 0 chr20 31432134 31432402 -35235603 + (CA)n Simple_repeat Simple_repeat 1 268 0 347 0 23 0 chr20 31432521 31432564 -35235441 + (GA)n Simple_repeat Simple_repeat 2 45 0 201 217 0 43 chr20 31432866 31432925 -35235080 + MIR SINE MIR 99 152 -110 431 297 42 17 chr20 31433208 31433380 -35234625 - MIR SINE MIR -63 145 13 340 214 63 111 chr20 31433426 31433552 -35234453 + L2 LINE L2 3193 3312 -1 567 236 163 77 chr20 31436336 31436569 -35231436 + MIR SINE MIR 9 261 -1 283 213 27 13 chr20 31437100 31437175 -35230830 - LTR45 LTR ERV1 0 525 450 211 250 42 42 chr20 31438001 31438073 -35229932 + MIR SINE MIR 60 131 -77 2220 118 0 3 chr20 31438074 31438387 -35229618 - AluSq SINE Alu -1 312 1 2324 74 7 7 chr20 31438607 31438906 -35229099 + AluSq SINE Alu 1 299 -14 241 231 0 19 chr20 31439142 31439194 -35228811 + CT-rich Low_complexity Low_complexity 1 51 0 302 288 136 23 chr20 31439196 31439328 -35228677 - L2 LINE L2 -11 3261 3115 371 354 49 12 chr20 31439401 31439565 -35228440 + L1M4 LINE L1 4927 5096 -1050 1023 127 0 48 chr20 31439576 31439741 -35228264 + AluJb SINE Alu 102 258 -54 1473 137 17 25 chr20 31439741 31439982 -35228023 - AluJb SINE Alu -73 239 1 503 284 131 0 chr20 31439988 31440171 -35227834 - L2 LINE L2 -240 3073 2867 417 300 0 31 chr20 31440372 31440502 -35227503 + MIR SINE MIR 109 234 -28 352 283 26 18 chr20 31440565 31440678 -35227327 + L2 LINE L2 3193 3306 -7 246 355 30 45 chr20 31440680 31440845 -35227160 - L2 LINE L2 -249 3023 2854 3284 205 21 23 chr20 31440845 31441499 -35226506 + MER82 DNA MER2_type 1 653 0 246 355 30 45 chr20 31441499 31441635 -35226370 - L2 LINE L2 -418 2854 2718 288 316 250 0 chr20 31441766 31441902 -35226103 - L2 LINE L2 0 3272 3103 1086 83 7 0 chr20 31442025 31442170 -35225835 - L1PB1 LINE L1 -2 6149 6004 363 309 221 27 chr20 31442170 31443189 -35224816 - L2 LINE L2 -221 3051 1827 263 297 131 23 chr20 31443365 31443402 -35224603 + L2 LINE L2 2686 2718 -554 876 130 15 0 chr20 31443402 31443533 -35224472 - FLAM_C SINE Alu 0 133 1 263 297 131 23 chr20 31443533 31443825 -35224180 + L2 LINE L2 2718 3043 -229 337 294 39 56 chr20 31444845 31445025 -35222980 - MER5A DNA MER1_type 0 189 13 577 302 68 8 chr20 31445049 31445284 -35222721 - MIR SINE MIR -12 250 2 662 128 0 0 chr20 31445734 31445828 -35222177 - AluSg/x SINE Alu -10 302 209 308 254 88 26 chr20 31446019 31446133 -35221872 + L2 LINE L2 2888 3008 -305 * 698 187 173 0 chr20 31446124 31446274 -35221731 + L2 LINE L2 3136 3311 -2 214 270 0 67 chr20 31446283 31446372 -35221633 - L3 LINE CR1 -21 1556 1474 289 287 21 0 chr20 31446634 31446728 -35221277 + MIR SINE MIR 35 130 -132 231 270 122 36 chr20 31448817 31449004 -35219001 + L2 LINE L2 2772 2968 -304 577 315 166 17 chr20 31449042 31449464 -35218541 - L2 LINE L2 0 3313 2829 483 281 20 7 chr20 31449685 31449831 -35218174 - MIR SINE MIR -58 204 57 459 280 68 5 chr20 31450523 31450735 -35217270 - MIR SINE MIR 0 262 29 288 353 17 0 chr20 31450786 31450902 -35217103 - MIR SINE MIR -98 164 47 217 294 92 18 chr20 31451159 31451268 -35216737 + MIR3 SINE MIR 84 200 -8 497 273 102 28 chr20 31452137 31452313 -35215692 - MIR3 SINE MIR -7 201 13 452 294 15 22 chr20 31452410 31452546 -35215459 - MIR SINE MIR -63 199 65 235 186 71 29 chr20 31452741 31452811 -35215194 - MIR SINE MIR -71 137 65 650 332 74 0 chr20 31452879 31453096 -35214909 + MIR SINE MIR 16 248 -14 473 329 64 24 chr20 31453462 31453711 -35214294 + L1MC4a LINE L1 5607 5865 -1943 2511 48 0 3 chr20 31453711 31454023 -35213982 - AluY SINE Alu 0 311 1 268 349 67 62 chr20 31454214 31454409 -35213596 - L2 LINE L2 -6 3266 3071 2544 80 0 0 chr20 31454546 31454858 -35213147 - AluSx SINE Alu 0 312 1 215 248 129 10 chr20 31455239 31455340 -35212665 - MIR3 SINE MIR -15 193 81 36 53 0 0 chr20 31456335 31456392 -35211613 + GC_rich Low_complexity Low_complexity 1 57 0 192 77 0 0 chr20 31456615 31456641 -35211364 + (CCG)n Simple_repeat Simple_repeat 3 28 0 337 270 0 11 chr20 31457099 31457188 -35210817 + (TCCA)n Simple_repeat Simple_repeat 4 91 0 233 288 15 0 chr20 31457365 31457431 -35210574 + MIR SINE MIR 36 102 -106 363 279 95 48 chr20 31457785 31457886 -35210119 - L2 LINE L2 -6 3307 3212 1223 150 119 17 chr20 31457886 31458180 -35209825 - MER33 DNA MER1_type 0 324 1 363 279 95 48 chr20 31458180 31458329 -35209676 - L2 LINE L2 -101 3212 2990 820 167 0 0 chr20 31458345 31458471 -35209534 + AluJb SINE Alu 1 126 -186 1631 123 39 99 chr20 31458473 31458805 -35209200 + AluJo SINE Alu 1 312 0 616 341 153 31 chr20 31458809 31459287 -35208718 - L2 LINE L2 -339 2975 2440 1895 133 39 36 chr20 31459446 31459754 -35208251 + AluJb SINE Alu 2 310 -2 1245 54 0 32 chr20 31459764 31459950 -35208055 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 266 308 0 69 chr20 31460302 31460357 -35207648 + L2 LINE L2 2701 2758 -556 2194 157 53 65 chr20 31460357 31460488 -35207517 + MLT1D LTR MaLR 1 132 -373 2325 103 7 0 chr20 31460488 31460788 -35207217 - AluSx SINE Alu -10 302 1 2194 157 53 65 chr20 31460788 31461167 -35206838 + MLT1D LTR MaLR 132 505 0 266 308 0 69 chr20 31461167 31461241 -35206764 + L2 LINE L2 2758 2821 -493 455 274 41 14 chr20 31461247 31461393 -35206612 + MIR SINE MIR 86 235 -27 183 184 0 0 chr20 31461394 31461432 -35206573 + (TTA)n Simple_repeat Simple_repeat 3 40 0 263 81 0 0 chr20 31461966 31462003 -35206002 - tRNA-Asp-GAC tRNA tRNA -38 37 1 360 283 46 64 chr20 31462102 31462243 -35205762 - L1MC4a LINE L1 -1884 5924 5789 2302 104 7 3 chr20 31462243 31462541 -35205464 + AluSq SINE Alu 1 299 -14 360 283 46 64 chr20 31462541 31462682 -35205323 - L1MC4a LINE L1 -2019 5789 5647 378 252 173 0 chr20 31462754 31462881 -35205124 - L1MC4a LINE L1 -523 5641 5493 480 246 65 85 chr20 31463046 31463268 -35204737 - L1MC4a LINE L1 -753 5393 5179 1970 82 16 0 chr20 31463268 31463511 -35204494 - AluSc SINE Alu -62 247 1 480 246 65 85 chr20 31463511 31463629 -35204376 - L1MC4a LINE L1 -967 5179 5060 370 206 108 0 chr20 31463925 31464027 -35203978 - L1MC4a LINE L1 -1578 4568 4456 372 306 27 0 chr20 31464027 31464138 -35203867 + L2 LINE L2 3187 3300 -13 373 281 146 42 chr20 31464146 31464338 -35203667 - L1MC4a LINE L1 -1700 4446 4235 243 167 0 21 chr20 31464371 31464419 -35203586 - MLT1L LTR MaLR -568 47 1 256 335 62 78 chr20 31464481 31464851 -35203154 + LTR67 LTR ERVL 186 549 -8 626 228 28 0 chr20 31464949 31465094 -35202911 - L1ME2 LINE L1 -25 6139 5991 2343 100 0 0 chr20 31465119 31465418 -35202587 + AluSg SINE Alu 1 299 -11 236 211 155 0 chr20 31465418 31465489 -35202516 + L1MC/D LINE L1 5432 5513 -729 264 59 0 0 chr20 31466337 31466371 -35201634 + (TCCA)n Simple_repeat Simple_repeat 2 35 0 273 274 88 9 chr20 31466375 31466488 -35201517 - L2 LINE L2 0 3272 3151 199 279 16 16 chr20 31466482 31466543 -35201462 - MIR3 SINE MIR -52 156 96 * 2476 55 14 0 chr20 31466575 31466865 -35201140 - AluSc SINE Alu -15 294 1 1509 181 22 50 chr20 31466922 31467242 -35200763 - AluJo SINE Alu -1 311 1 187 363 186 0 chr20 31467341 31467465 -35200540 + L2 LINE L2 3117 3263 -9 * 334 287 85 24 chr20 31467452 31467616 -35200389 + L2 LINE L2 2412 2585 -729 901 132 0 0 chr20 31467681 31467810 -35200195 - AluJb SINE Alu -9 303 175 485 270 106 95 chr20 31468809 31469272 -35198733 + L1MEd LINE L1 2 469 -5650 2204 133 7 0 chr20 31469272 31469573 -35198432 - AluSg SINE Alu -6 304 2 3142 225 59 21 chr20 31469823 31470214 -35197791 + L1M4 LINE L1 3943 4318 -1828 1424 177 156 91 chr20 31470214 31470297 -35197708 - MLT1D LTR MaLR 0 505 429 2318 94 0 3 chr20 31470297 31470605 -35197400 - AluSx SINE Alu 0 307 1 1424 177 156 91 chr20 31470605 31470994 -35197011 - MLT1D LTR MaLR -76 429 1 3142 225 59 21 chr20 31470994 31471568 -35196437 + L1M4 LINE L1 4318 4945 -1201 1630 239 90 62 chr20 31471766 31472343 -35195662 + MLT1E LTR MaLR 1 593 0 2135 114 4 0 chr20 31472616 31472917 -35195088 + AluSx SINE Alu 1 302 0 201 231 0 0 chr20 31473359 31473398 -35194607 + CT-rich Low_complexity Low_complexity 4 42 0 1016 245 24 23 chr20 31473438 31473698 -35194307 - MIR SINE MIR 0 262 5 489 34 0 0 chr20 31473925 31473984 -35194021 + (TTCTC)n Simple_repeat Simple_repeat 4 62 0 2193 101 4 0 chr20 31473986 31474262 -35193743 - AluSp SINE Alu -36 277 1 291 136 0 0 chr20 31474501 31474545 -35193460 - MSTB LTR MaLR 0 426 383 1388 86 0 0 chr20 31474545 31474719 -35193286 - AluSq SINE Alu -8 305 132 2497 119 43 0 chr20 31474719 31475090 -35192915 - MSTB LTR MaLR -39 387 1 252 0 0 0 chr20 31475117 31475145 -35192860 + (CA)n Simple_repeat Simple_repeat 1 28 0 474 275 80 56 chr20 31475205 31475346 -35192659 - MLT1J LTR MaLR -18 493 357 1753 134 17 60 chr20 31475346 31475506 -35192499 - AluJb SINE Alu -14 298 155 2263 96 17 0 chr20 31475506 31475798 -35192207 - AluSg SINE Alu -13 297 1 1753 134 17 60 chr20 31475798 31475935 -35192070 - AluJb SINE Alu -157 155 14 474 275 80 56 chr20 31475935 31476051 -35191954 - MLT1J LTR MaLR -154 357 245 1033 88 17 4 chr20 31476051 31476290 -35191715 + (TTTC)n Simple_repeat Simple_repeat 1 242 0 474 275 80 56 chr20 31476290 31476403 -35191602 - MLT1J LTR MaLR -266 245 111 244 273 97 40 chr20 31476409 31476585 -35191420 - L1ME3A LINE L1 -242 5928 5743 1347 281 38 15 chr20 31476589 31477063 -35190942 - LTR16C LTR ERVL -6 485 1 324 310 142 22 chr20 31477095 31477327 -35190678 - L1ME3A LINE L1 -467 5703 5444 341 269 36 18 chr20 31477334 31477501 -35190504 - L1ME LINE L1 -571 5595 5426 986 142 0 0 chr20 31477577 31477718 -35190287 - FLAM_C SINE Alu -2 141 1 1486 185 33 49 chr20 31477748 31477878 -35190127 - Charlie1 DNA MER1_type 0 2761 2630 2247 109 0 0 chr20 31477878 31478181 -35189824 - AluSx SINE Alu 0 303 1 1486 185 33 49 chr20 31478181 31478257 -35189748 - Charlie1 DNA MER1_type -131 2630 2554 2114 113 34 0 chr20 31478257 31478548 -35189457 - AluSx SINE Alu -11 301 1 1486 185 33 49 chr20 31478548 31478765 -35189240 - Charlie1 DNA MER1_type -207 2554 2343 2393 259 60 57 chr20 31478832 31479361 -35188644 - L1MEc LINE L1 -4331 2390 1864 2365 117 0 0 chr20 31479361 31479669 -35188336 - AluSx SINE Alu -4 308 1 2393 259 60 57 chr20 31479669 31480174 -35187831 - L1MEc LINE L1 -4857 1864 1349 2055 141 21 0 chr20 31480174 31480465 -35187540 - AluJb SINE Alu -4 308 12 2393 259 60 57 chr20 31480465 31480705 -35187300 - L1MEc LINE L1 -5372 1349 1111 350 227 0 10 chr20 31480739 31480836 -35187169 + (CATA)n Simple_repeat Simple_repeat 3 98 0 352 119 0 0 chr20 31481037 31481096 -35186909 - FLAM SINE Alu -1 132 74 1553 238 6 58 chr20 31481109 31481605 -35186400 - MER65B LTR ERV1 -8 523 54 1256 126 0 0 chr20 31481606 31481781 -35186224 - AluSx SINE Alu -3 307 133 457 139 51 0 chr20 31481781 31481860 -35186145 + MLT1D LTR MaLR 309 391 -114 2116 110 0 0 chr20 31481883 31482218 -35185787 - AluSx SINE Alu 0 335 1 1029 98 0 0 chr20 31482223 31482356 -35185649 - AluSx SINE Alu -179 133 1 356 125 31 16 chr20 31482356 31482420 -35185585 - MER65B LTR ERV1 -466 65 1 3115 234 42 15 chr20 31482420 31482599 -35185406 - L1M4 LINE L1 -2101 4045 3872 2214 126 7 0 chr20 31482599 31482908 -35185097 - AluSx SINE Alu -1 311 1 3115 234 42 15 chr20 31482908 31483605 -35184400 - L1M4 LINE L1 -2274 3872 3145 2891 194 62 2 chr20 31483602 31484235 -35183770 - L1MEc LINE L1 -5842 698 28 * 269 222 111 10 chr20 31484259 31484358 -35183647 + MIR SINE MIR 154 262 0 412 197 247 28 chr20 31484762 31484940 -35183065 - MIR SINE MIR -11 251 35 1062 241 65 70 chr20 31485150 31485426 -35182579 - MLT1J LTR MaLR -2 509 233 2144 149 0 13 chr20 31485426 31485742 -35182263 + AluJo SINE Alu 1 312 0 1062 241 65 70 chr20 31485742 31485846 -35182159 - MLT1J LTR MaLR -278 233 130 2441 68 14 0 chr20 31485846 31486138 -35181867 - AluY SINE Alu -15 296 1 1062 241 65 70 chr20 31486138 31486245 -35181760 - MLT1J LTR MaLR -381 130 23 644 280 42 5 chr20 31486302 31486495 -35181510 - MIR SINE MIR -34 228 29 856 166 7 0 chr20 31487332 31487477 -35180528 + U1 snRNA snRNA 1 146 -19 498 325 104 35 chr20 31487606 31488091 -35179914 + L2 LINE L2 2764 3272 0 1241 132 62 126 chr20 31488135 31488460 -35179545 - L1MB7 LINE L1 -62 6122 5819 1015 92 0 0 chr20 31488460 31488601 -35179404 - AluY SINE Alu -13 298 158 2450 186 65 12 chr20 31488601 31488929 -35179076 - L1MB7 LINE L1 -362 5822 5513 1668 190 0 21 chr20 31488929 31489244 -35178761 - AluJb SINE Alu 0 313 5 2450 186 65 12 chr20 31489244 31489754 -35178251 - L1MB7 LINE L1 -671 5513 4942 3054 189 53 33 chr20 31489774 31490426 -35177579 - L1MC4a LINE L1 0 7808 7136 2211 139 0 0 chr20 31490426 31490736 -35177269 - AluJb SINE Alu -2 310 1 3054 189 53 33 chr20 31490736 31490876 -35177129 - L1MC4a LINE L1 -672 7136 7000 191 224 194 0 chr20 31490932 31490999 -35177006 - MIR SINE MIR -66 142 63 2191 117 0 13 chr20 31491154 31491453 -35176552 - AluSx SINE Alu -17 295 1 2523 90 3 0 chr20 31491830 31492142 -35175863 + AluSp SINE Alu 1 313 0 650 253 97 2 chr20 31492192 31492453 -35175552 - MLT1G LTR MaLR 0 590 325 1970 164 3 3 chr20 31492729 31493028 -35174977 - AluSx SINE Alu -13 299 1 301 329 76 19 chr20 31493028 31493178 -35174827 + L1MC4a LINE L1 5737 5898 -1910 993 210 54 9 chr20 31493204 31493428 -35174577 + MIR SINE MIR 21 254 -8 2358 90 7 0 chr20 31493518 31493819 -35174186 + AluSq SINE Alu 1 303 -10 325 231 67 0 chr20 31494331 31494435 -35173570 - Charlie8 DNA MER1_type -2143 274 164 520 204 25 111 chr20 31495177 31495204 -35172801 + MIR SINE MIR 3 31 -231 2377 89 0 29 chr20 31495204 31495520 -35172485 - AluSg SINE Alu -3 307 1 520 204 25 111 chr20 31495520 31495654 -35172351 + MIR SINE MIR 31 150 -112 270 286 48 0 chr20 31496133 31496217 -35171788 + L2 LINE L2 3226 3313 0 274 289 89 0 chr20 31496267 31496357 -35171648 - MIR SINE MIR -48 214 117 466 242 121 8 chr20 31496363 31496495 -35171510 - L2 LINE L2 0 3313 3167 788 245 134 9 chr20 31496597 31496813 -35171192 + MIR SINE MIR 19 261 -1 370 301 70 32 chr20 31496830 31496970 -35171035 - L2 LINE L2 -249 3023 2875 2351 113 0 3 chr20 31496970 31497280 -35170725 + AluSx SINE Alu 1 309 -3 370 301 70 32 chr20 31497280 31497295 -35170710 - L2 LINE L2 -397 2875 2862 450 36 0 0 chr20 31497898 31497954 -35170051 + (TG)n Simple_repeat Simple_repeat 2 57 0 550 273 6 48 chr20 31498026 31498191 -35169814 + MIR SINE MIR 46 203 -59 467 176 59 0 chr20 31498374 31498476 -35169529 - MER5A DNA MER1_type -77 112 5 845 141 81 60 chr20 31498488 31498619 -35169386 - MER5A DNA MER1_type 0 189 62 1818 151 101 50 chr20 31498619 31498657 -35169348 - MLT2C1 LTR ERVL 0 397 362 585 64 0 0 chr20 31498657 31498735 -35169270 + (TG)n Simple_repeat Simple_repeat 2 79 0 1818 151 101 50 chr20 31498735 31498955 -35169050 - MLT2C1 LTR ERVL -35 362 112 1897 148 7 7 chr20 31498955 31499245 -35168760 + AluJo SINE Alu 1 290 -22 1818 151 101 50 chr20 31499245 31499363 -35168642 - MLT2C1 LTR ERVL -285 112 1 845 141 81 60 chr20 31499363 31499416 -35168589 - MER5A DNA MER1_type -127 62 1 241 258 0 0 chr20 31500288 31500354 -35167651 - MLT1L LTR MaLR -6 609 544 * 521 217 6 75 chr20 31500351 31500432 -35167573 - Charlie4a DNA MER1_type -1453 508 442 459 235 10 0 chr20 31500432 31500534 -35167471 - L1MA10 LINE L1 0 6334 6232 521 217 6 75 chr20 31500534 31500613 -35167392 - Charlie4a DNA MER1_type -1519 442 359 756 262 138 12 chr20 31500614 31501026 -35166979 - LTR16B LTR ERVL 0 464 1 1019 218 45 0 chr20 31501032 31501275 -35166730 - Charlie4a DNA MER1_type -152 356 103 2352 98 0 3 chr20 31501278 31501584 -35166421 + AluY SINE Alu 1 305 -6 586 306 35 35 chr20 31501715 31501914 -35166091 + MIR SINE MIR 58 256 -6 1437 257 159 16 chr20 31501955 31502472 -35165533 - MLT1G1 LTR MaLR 0 595 5 896 251 61 78 chr20 31502597 31503008 -35164997 - MLT1L LTR MaLR -44 571 168 2064 230 115 35 chr20 31503159 31503823 -35164182 - L1ME3A LINE L1 -9 6161 5552 4320 84 28 16 chr20 31503823 31504396 -35163609 - LTR19B LTR ERV1 0 580 1 2064 230 115 35 chr20 31504396 31504443 -35163562 - L1ME3A LINE L1 -618 5552 5510 1503 203 9 44 chr20 31504443 31504758 -35163247 - AluJb SINE Alu -4 308 5 2064 230 115 35 chr20 31504758 31504819 -35163186 - L1ME3A LINE L1 -660 5510 5326 343 248 319 0 chr20 31504929 31505042 -35162963 - MER91A DNA MER1_type -47 149 1 360 284 31 132 chr20 31505086 31505541 -35162464 + L3 LINE CR1 1168 1576 -1 636 208 188 43 chr20 31506139 31506301 -35161704 + MIR SINE MIR 22 222 -40 288 120 0 0 chr20 31506301 31506351 -35161654 + (CA)n Simple_repeat Simple_repeat 2 51 0 636 208 188 43 chr20 31506351 31506395 -35161610 + MIR SINE MIR 222 258 -4 304 260 0 0 chr20 31506526 31506599 -35161406 + MIR SINE MIR 51 123 -139 784 239 19 10 chr20 31507118 31507260 -35160745 + MER3 DNA MER1_type 1 140 -69 6394 38 8 1 chr20 31507260 31508060 -35159945 + L1PA5 LINE L1 5346 6150 -4 2249 109 14 0 chr20 31508065 31508358 -35159647 + AluSx SINE Alu 1 297 -15 1890 140 28 11 chr20 31508358 31508714 -35159291 - L1MB3 LINE L1 -9 6174 5813 784 239 19 10 chr20 31508714 31508769 -35159236 + MER3 DNA MER1_type 142 207 -2 944 272 12 19 chr20 31508770 31509027 -35158978 + MIR SINE MIR 8 262 0 447 276 214 24 chr20 31509379 31509716 -35158289 - L2 LINE L2 0 3313 2913 489 282 252 15 chr20 31509830 31510493 -35157512 + L2 LINE L2 2084 2903 -411 1965 142 27 0 chr20 31510660 31510955 -35157050 - AluJo SINE Alu -9 303 1 312 245 202 0 chr20 31510975 31511069 -35156936 + L2 LINE L2 3201 3313 0 1037 221 49 0 chr20 31511381 31511607 -35156398 - MIR SINE MIR -11 251 15 241 299 26 0 chr20 31511657 31511734 -35156271 - L2 LINE L2 -37 3235 3157 234 322 148 0 chr20 31512110 31512225 -35155780 - L2 LINE L2 0 3272 3141 1193 244 144 65 chr20 31512429 31512902 -35155103 + L1MC4a LINE L1 5439 5873 -1935 1720 161 16 46 chr20 31512902 31513207 -35154798 + AluJo SINE Alu 1 296 -16 1193 244 144 65 chr20 31513207 31513278 -35154727 + L1MC4a LINE L1 5873 5937 -1871 2240 133 3 0 chr20 31513278 31513587 -35154418 + AluSx SINE Alu 1 310 -2 1193 244 144 65 chr20 31513587 31513714 -35154291 + L1MC4a LINE L1 5937 6164 -1644 344 200 0 0 chr20 31514146 31514216 -35153789 + MIR SINE MIR 186 255 -7 456 315 48 72 chr20 31514604 31514934 -35153071 + L1MC4a LINE L1 5643 5982 -139 1503 156 14 83 chr20 31514986 31515274 -35152731 - AluJo SINE Alu -44 268 1 334 283 136 29 chr20 31515425 31515874 -35152131 - L1ME4a LINE L1 -7 6114 5618 2314 116 3 0 chr20 31515927 31516230 -35151775 + AluSx SINE Alu 3 306 -6 295 212 24 11 chr20 31516326 31516416 -35151589 + L1MC4 LINE L1 7904 8042 0 2085 120 3 0 chr20 31517151 31517435 -35150570 - AluJo SINE Alu -5 307 23 1428 161 5 0 chr20 31517435 31517653 -35150352 - AluJb SINE Alu -93 219 1 1599 170 114 1 chr20 31517653 31518135 -35149870 - L1ME4a LINE L1 -684 5500 4979 917 142 0 0 chr20 31518135 31518262 -35149743 + AluJb SINE Alu 1 127 -185 2294 115 0 0 chr20 31518268 31518564 -35149441 + AluSx SINE Alu 1 296 -16 2062 120 31 0 chr20 31518796 31519088 -35148917 + AluSq SINE Alu 3 303 -10 275 211 0 0 chr20 31519163 31519215 -35148790 + MIR SINE MIR 99 150 -112 331 331 114 6 chr20 31519315 31519481 -35148524 - L3 LINE CR1 -13 1564 1381 438 328 27 22 chr20 31519592 31519775 -35148230 - MIR SINE MIR -73 189 6 838 168 13 0 chr20 31520057 31520206 -35147799 - Zaphod DNA AcHobo 0 4031 3881 513 288 121 1 chr20 31520247 31520578 -35147427 - MER115 DNA AcHobo -112 581 171 303 228 13 13 chr20 31520610 31520689 -35147316 - MER115 DNA AcHobo -614 79 1 700 236 19 58 chr20 31521009 31521217 -35146788 + MIR SINE MIR 30 229 -33 184 338 38 0 chr20 31521460 31521540 -35146465 - MIR SINE MIR -78 130 48 302 231 13 13 chr20 31521919 31521997 -35146008 + MER115 DNA AcHobo 1 78 -615 283 245 64 11 chr20 31522052 31522146 -35145859 + MIR SINE MIR 99 197 -65 301 155 42 28 chr20 31522181 31522252 -35145753 + MIR3 SINE MIR 88 159 -49 273 307 29 43 chr20 31522254 31522394 -35145611 + Charlie8 DNA MER1_type 2 139 -2278 801 167 0 22 chr20 31522426 31522564 -35145441 + FRAM SINE Alu 25 159 -17 595 234 13 7 chr20 31522568 31522722 -35145283 + Charlie8 DNA MER1_type 126 280 -2137 2421 82 0 7 chr20 31522902 31523196 -35144809 + AluSq SINE Alu 11 302 -11 783 137 0 43 chr20 31523204 31523343 -35144662 + FLAM_C SINE Alu 1 133 0 223 290 19 37 chr20 31523662 31523769 -35144236 - MIR3 SINE MIR -14 194 90 437 269 128 6 chr20 31523839 31523995 -35144010 + MIR SINE MIR 72 246 -16 258 229 94 31 chr20 31524036 31524132 -35143873 - MLT1K LTR MaLR -92 496 395 505 112 0 41 chr20 31524132 31524230 -35143775 + (TCTCCC)n Simple_repeat Simple_repeat 4 97 0 878 251 94 30 chr20 31524237 31524504 -35143501 - MLT1K LTR MaLR -303 285 2 556 277 34 0 chr20 31524521 31524669 -35143336 - L2 LINE L2 -4 3268 3116 2301 116 3 0 chr20 31524674 31524985 -35143020 + AluSx SINE Alu 1 312 0 347 190 127 0 chr20 31525429 31525508 -35142497 + MIR SINE MIR 38 126 -136 349 244 226 18 chr20 31525535 31525756 -35142249 - L1ME4a LINE L1 -3 6118 5852 372 273 148 27 chr20 31525805 31525988 -35142017 - MIR SINE MIR -56 206 2 711 252 77 29 chr20 31526001 31526275 -35141730 - L1ME4a LINE L1 -289 5832 5546 259 248 155 12 chr20 31526301 31526462 -35141543 - L1ME4a LINE L1 -647 5474 5291 435 202 246 0 chr20 31526497 31526611 -35141394 - MER5A DNA MER1_type -8 181 40 757 249 179 79 chr20 31526612 31527015 -35140990 - MLT1H LTR MaLR -2 547 94 2537 42 13 7 chr20 31527015 31527323 -35140682 + AluY SINE Alu 2 311 0 757 249 179 79 chr20 31527323 31527426 -35140579 - MLT1H LTR MaLR -455 94 3 618 145 184 13 chr20 31527480 31527632 -35140373 - MER5B DNA MER1_type 0 178 1 1349 122 13 84 chr20 31527632 31527870 -35140135 - AluJo SINE Alu -7 305 85 220 188 21 0 chr20 31528270 31528318 -35139687 - L2 LINE L2 0 3272 3224 208 241 69 0 chr20 31528519 31528577 -35139428 - MIR SINE MIR -6 256 195 221 263 18 0 chr20 31528604 31528661 -35139344 + MIR SINE MIR 2 59 -203 326 299 50 70 chr20 31528772 31528948 -35139057 - MIR SINE MIR -68 140 12 303 277 219 8 chr20 31530580 31530699 -35137306 - L1MC4a LINE L1 -1881 5927 5784 392 294 62 12 chr20 31530710 31530870 -35137135 + Charlie8 DNA MER1_type 47 214 -2203 195 143 0 0 chr20 31531037 31531072 -35136933 - L2 LINE L2 0 3313 3279 2060 121 17 17 chr20 31533686 31533984 -35134021 + AluSx SINE Alu 1 298 -14 429 195 0 11 chr20 31534272 31534359 -35133646 + MLT1J LTR MaLR 95 180 -331 280 282 48 32 chr20 31534510 31534634 -35133371 + MLT1J LTR MaLR 384 509 -2 1154 257 91 59 chr20 31534979 31535368 -35132637 - L2 LINE L2 -4 3309 2886 2188 117 0 0 chr20 31535368 31535678 -35132327 + AluSx SINE Alu 1 310 0 1154 257 91 59 chr20 31535678 31535840 -35132165 - L2 LINE L2 -427 2886 2731 448 272 217 18 chr20 31536941 31537158 -35130847 + MIR SINE MIR 3 262 0 637 268 169 3 chr20 31537207 31537502 -35130503 + L2 LINE L2 2388 2731 -583 610 223 64 13 chr20 31538297 31538454 -35129551 - L2 LINE L2 -17 3296 3132 1868 146 0 30 chr20 31538621 31538922 -35129083 + AluJb SINE Alu 1 292 -20 181 372 0 0 chr20 31539137 31539215 -35128790 - MIR3 SINE MIR -21 187 110 355 183 14 0 chr20 31539230 31539301 -35128704 - L2 LINE L2 -304 3009 2938 223 287 98 25 chr20 31539495 31539617 -35128388 - MIR SINE MIR -55 207 77 537 246 91 32 chr20 31540202 31540381 -35127624 - L2 LINE L2 -3 3310 3114 1905 163 3 28 chr20 31540381 31540700 -35127305 + AluJo SINE Alu 1 311 -1 537 246 91 32 chr20 31540700 31540740 -35127265 - L2 LINE L2 -199 3114 3078 366 123 0 0 chr20 31540740 31540797 -35127208 + (GGAA)n Simple_repeat Simple_repeat 3 59 0 668 226 44 11 chr20 31540803 31540984 -35127021 - L2 LINE L2 -189 3124 2938 320 283 20 0 chr20 31541270 31541369 -35126636 - L2 LINE L2 -673 2641 2541 195 330 27 36 chr20 31541367 31541479 -35126526 + L2 LINE L2 2927 3037 -276 * 225 146 24 0 chr20 31541584 31541625 -35126380 + L2 LINE L2 3199 3240 -73 1265 242 22 62 chr20 31541651 31541780 -35126225 + L2 LINE L2 2881 3014 -299 2209 132 0 10 chr20 31541780 31542084 -35125921 - AluSx SINE Alu -11 301 1 1265 242 22 62 chr20 31542084 31542405 -35125600 + L2 LINE L2 3014 3313 0 255 260 99 50 chr20 31542446 31542627 -35125378 - L2 LINE L2 -473 2841 2652 250 288 59 10 chr20 31542988 31543138 -35124867 - MIR SINE MIR -70 192 35 1556 163 103 0 chr20 31543614 31543866 -35124139 + AluJb SINE Alu 7 284 -28 509 56 44 0 chr20 31543866 31543956 -35124049 + (TA)n Simple_repeat Simple_repeat 2 95 0 2229 113 10 0 chr20 31544261 31544562 -35123443 + AluSx SINE Alu 1 304 -8 279 197 120 86 chr20 31544580 31544697 -35123308 + L1ME LINE L1 5578 5698 -472 1700 140 0 0 chr20 31544697 31544932 -35123073 - AluSx SINE Alu -77 235 1 2152 137 3 13 chr20 31545239 31545554 -35122451 - AluJo SINE Alu 0 312 1 284 176 54 40 chr20 31545693 31545767 -35122238 - L1MC/D LINE L1 -2035 5773 5699 222 277 0 0 chr20 31546240 31546287 -35121718 + polypyrimidine Low_complexity Low_complexity 3 49 0 351 285 61 131 chr20 31546447 31546875 -35121130 - L2 LINE L2 -34 3238 2841 396 208 177 0 chr20 31546928 31547024 -35120981 - L2 LINE L2 0 3313 3201 630 190 58 75 chr20 31547039 31547213 -35120792 - MIR SINE MIR 0 262 92 867 271 133 55 chr20 31547262 31547877 -35120128 + L1MC4a LINE L1 5515 6177 -1631 441 286 78 7 chr20 31547955 31548109 -35119896 - MIR3 SINE MIR -39 169 5 * 925 282 158 11 chr20 31548105 31548749 -35119256 - L2 LINE L2 -23 3290 2558 257 329 0 0 chr20 31548743 31548828 -35119177 + MIR3 SINE MIR 121 205 -3 * 788 284 44 0 chr20 31549255 31549480 -35118525 + Charlie8 DNA MER1_type 3 237 -2180 598 268 216 9 chr20 31549484 31549910 -35118095 - L1MC4a LINE L1 -1639 6169 5656 1620 157 47 8 chr20 31550049 31550304 -35117701 + AluJo SINE Alu 1 265 -47 326 182 0 102 chr20 31550396 31550484 -35117521 + MIR3 SINE MIR 110 188 -20 330 253 235 12 chr20 31550809 31550971 -35117034 + MIR SINE MIR 50 247 -15 1760 195 20 0 chr20 31551041 31551339 -35116666 - AluJb SINE Alu -8 304 1 231 114 0 0 chr20 31551358 31551393 -35116612 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 295 287 132 40 chr20 31551400 31551574 -35116431 - L2 LINE L2 -17 3296 3107 361 235 76 25 chr20 31551696 31551815 -35116190 - MIR SINE MIR -65 197 73 2461 91 0 0 chr20 31551837 31552145 -35115860 - AluSg SINE Alu -2 308 1 230 286 0 29 chr20 31552809 31552879 -35115126 + C-rich Low_complexity Low_complexity 1 68 0 617 268 81 0 chr20 31552896 31553105 -35114900 + MIR SINE MIR 30 255 -7 339 327 123 9 chr20 31553187 31553520 -35114485 + L2 LINE L2 2593 2963 -351 23 0 0 0 chr20 31554093 31554116 -35113889 + GC_rich Low_complexity Low_complexity 1 23 0 227 103 26 0 chr20 31554137 31554176 -35113829 + GA-rich Low_complexity Low_complexity 1 40 0 54 40 0 0 chr20 31554332 31554407 -35113598 + GC_rich Low_complexity Low_complexity 1 75 0 339 269 0 13 chr20 31555709 31555787 -35112218 + MIR SINE MIR 73 149 -59 184 305 95 11 chr20 31556023 31556118 -35111887 + MIR SINE MIR 34 136 -126 639 294 35 28 chr20 31556868 31557123 -35110882 - MIR SINE MIR -4 258 2 408 312 51 13 chr20 31557311 31557468 -35110537 + MIR3 SINE MIR 39 201 -7 409 269 171 52 chr20 31557840 31558126 -35109879 - Charlie8 DNA MER1_type -1010 1407 1 207 344 41 25 chr20 31558234 31558356 -35109649 - MIR SINE MIR -17 245 122 531 285 91 22 chr20 31558996 31559244 -35108761 + MIR SINE MIR 2 262 0 1291 251 26 59 chr20 31559373 31559991 -35108014 - L2 LINE L2 -2 3311 2668 2237 97 0 3 chr20 31559991 31560300 -35107705 + AluSc SINE Alu 1 308 -1 1291 251 26 59 chr20 31560300 31560406 -35107599 - L2 LINE L2 -645 2668 2560 626 273 101 18 chr20 31560479 31560706 -35107299 + MIR SINE MIR 12 257 -5 234 315 34 0 chr20 31561537 31561626 -35106379 + L2 LINE L2 2996 3087 -226 833 249 35 10 chr20 31562039 31562240 -35105765 + MIR SINE MIR 57 262 0 477 294 98 0 chr20 31562233 31562376 -35105629 - MIR SINE MIR -105 157 1 * 2368 78 0 0 chr20 31562457 31562763 -35105242 - AluSx SINE Alu -6 306 1 184 237 0 0 chr20 31563287 31563325 -35104680 + MIR SINE MIR 218 255 -7 244 241 37 0 chr20 31563354 31563408 -35104597 + MIR SINE MIR 89 144 -64 538 246 96 18 chr20 31563498 31563665 -35104340 + MIR SINE MIR 72 251 -11 536 293 135 19 chr20 31563783 31564049 -35103956 + L3 LINE CR1 1281 1577 0 1931 138 7 13 chr20 31564177 31564482 -35103523 - AluJb SINE Alu -3 309 7 370 188 89 20 chr20 31564520 31564621 -35103384 - L1MC5 LINE L1 -47 7914 7807 763 186 77 66 chr20 31564624 31564807 -35103198 + MER3 DNA MER1_type 1 185 -24 329 196 168 63 chr20 31564843 31564932 -35103073 - L1MC5 LINE L1 -157 7804 7726 2378 81 0 0 chr20 31564932 31565228 -35102777 + AluSx SINE Alu 2 297 -15 329 196 168 63 chr20 31565228 31565281 -35102724 - L1MC5 LINE L1 -235 7726 7647 889 234 0 0 chr20 31565281 31565465 -35102540 - FRAM SINE Alu 0 176 1 480 283 152 0 chr20 31565536 31565727 -35102278 + MER102b DNA MER1_type 119 338 -3 303 310 0 10 chr20 31565960 31566060 -35101945 - MIR SINE MIR -63 145 47 180 0 0 0 chr20 31566210 31566230 -35101775 + (A)n Simple_repeat Simple_repeat 1 20 0 235 338 0 0 chr20 31566577 31566648 -35101357 + MIR SINE MIR 35 105 -157 468 318 105 56 chr20 31566672 31566858 -35101147 + L2 LINE L2 2578 2754 -559 1920 148 0 10 chr20 31566858 31567161 -35100844 + AluJo SINE Alu 1 300 -12 1664 171 3 34 chr20 31567162 31567484 -35100521 + AluSx SINE Alu 1 312 0 2097 110 0 0 chr20 31567488 31567809 -35100196 + AluSx SINE Alu 1 321 0 468 318 105 56 chr20 31567809 31568317 -35099688 + L2 LINE L2 2756 3299 -14 2153 107 7 3 chr20 31568317 31568616 -35099389 + AluSx SINE Alu 1 300 -12 468 318 105 56 chr20 31568616 31568632 -35099373 + L2 LINE L2 3299 3313 0 262 250 70 30 chr20 31568643 31568743 -35099262 + MIR SINE MIR 103 206 -56 362 350 153 10 chr20 31568970 31569173 -35098832 - MIR SINE MIR -23 239 8 713 276 154 29 chr20 31569237 31569743 -35098262 - L2 LINE L2 0 3313 2872 2090 106 0 3 chr20 31569743 31570058 -35097947 + AluSx SINE Alu 1 314 0 1853 125 35 3 chr20 31570067 31570354 -35097651 + AluSx SINE Alu 1 296 -16 713 276 154 29 chr20 31570354 31570534 -35097471 - L2 LINE L2 -447 2866 2534 620 296 28 7 chr20 31570921 31571146 -35096859 + MIR SINE MIR 35 261 -1 208 363 0 0 chr20 31571700 31571846 -35096159 + (CAGA)n Simple_repeat Simple_repeat 4 149 0 270 0 0 0 chr20 31571860 31571890 -35096115 + (CAGA)n Simple_repeat Simple_repeat 4 33 0 234 0 0 0 chr20 31571951 31571977 -35096028 + (CAGA)n Simple_repeat Simple_repeat 4 29 0 254 95 40 40 chr20 31572038 31572112 -35095893 + (CAGA)n Simple_repeat Simple_repeat 4 77 0 198 0 0 0 chr20 31572214 31572236 -35095769 + (CAGA)n Simple_repeat Simple_repeat 4 25 0 337 241 17 40 chr20 31572346 31572575 -35095430 + (CAGA)n Simple_repeat Simple_repeat 1 223 0 353 282 11 11 chr20 31572590 31572764 -35095241 + (CAGA)n Simple_repeat Simple_repeat 4 177 0 213 132 0 0 chr20 31572862 31572900 -35095105 + (CAGA)n Simple_repeat Simple_repeat 4 41 0 198 0 0 0 chr20 31572954 31572976 -35095029 + (CAGA)n Simple_repeat Simple_repeat 4 25 0 226 270 0 47 chr20 31573002 31573150 -35094855 + (CAGA)n Simple_repeat Simple_repeat 4 144 0 228 308 0 27 chr20 31573318 31573464 -35094541 + (CAGA)n Simple_repeat Simple_repeat 4 145 0 222 200 0 0 chr20 31574695 31574735 -35093270 + MIR SINE MIR 117 156 -106 1168 250 127 29 chr20 31574993 31575695 -35092310 - L2 LINE L2 0 3313 2540 1872 155 3 0 chr20 31575695 31575991 -35092014 - AluJo SINE Alu -15 297 1 1168 250 127 29 chr20 31575991 31576008 -35091997 - L2 LINE L2 -773 2540 2526 321 26 0 0 chr20 31576255 31576293 -35091712 + (TG)n Simple_repeat Simple_repeat 1 38 0 757 164 0 0 chr20 31576293 31576409 -35091596 - FLAM_C SINE Alu -17 116 1 339 222 12 0 chr20 31576439 31576520 -35091485 - MIR SINE MIR -77 131 50 218 241 19 0 chr20 31576593 31576647 -35091358 - MIR SINE MIR -115 147 93 308 344 119 19 chr20 31577581 31577914 -35090091 + L2 LINE L2 2658 3022 -250 2160 89 4 0 chr20 31577914 31578236 -35089769 + AluSp SINE Alu 1 323 0 211 273 0 0 chr20 31578333 31578388 -35089617 + L2 LINE L2 3218 3272 0 220 370 19 9 chr20 31578432 31578540 -35089465 + L3 LINE CR1 1328 1436 -141 301 319 22 0 chr20 31578839 31578930 -35089075 - MIR3 SINE MIR -7 201 109 381 43 0 0 chr20 31579167 31579214 -35088791 + (CA)n Simple_repeat Simple_repeat 1 47 0 351 298 84 0 chr20 31579479 31579610 -35088395 - MIR3 SINE MIR -46 162 21 523 329 80 78 chr20 31579691 31580141 -35087864 - L2 LINE L2 -1 3271 2821 637 250 14 0 chr20 31580363 31580507 -35087498 + MIR SINE MIR 2 147 -115 1617 163 42 17 chr20 31580509 31580798 -35087207 + AluJo SINE Alu 1 296 -16 318 259 82 15 chr20 31580925 31581060 -35086945 - MIR SINE MIR -26 236 93 334 289 35 9 chr20 31585224 31585338 -35082667 - MIR3 SINE MIR -7 201 85 355 246 45 20 chr20 31585736 31585880 -35082125 - MIR SINE MIR -14 248 101 263 253 33 22 chr20 31586546 31586637 -35081368 - MIR SINE MIR -59 149 58 455 211 53 53 chr20 31588941 31589074 -35078931 - MIR3 SINE MIR -36 172 40 180 0 0 0 chr20 31589339 31589359 -35078646 + (AGGGGG)n Simple_repeat Simple_repeat 5 24 0 265 310 89 51 chr20 31589638 31589796 -35078209 - MIR3 SINE MIR -9 199 36 468 194 37 9 chr20 31589800 31589908 -35078097 - L2 LINE L2 -11 3302 3192 324 217 116 65 chr20 31589964 31590102 -35077903 - MER5A DNA MER1_type 0 189 45 1829 163 3 10 chr20 31590171 31590484 -35077521 - AluJo SINE Alu -1 311 1 279 338 0 0 chr20 31590510 31590590 -35077415 + L2 LINE L2 2706 2785 -529 377 298 72 34 chr20 31590704 31590850 -35077155 + MLT1L LTR MaLR 7 165 -450 852 209 99 0 chr20 31590850 31591022 -35076983 + MER5A DNA MER1_type 1 189 0 377 298 72 34 chr20 31591022 31591083 -35076922 + MLT1L LTR MaLR 165 222 -393 978 240 208 5 chr20 31591083 31591462 -35076543 + MLT1J LTR MaLR 1 456 -55 2168 113 8 80 chr20 31591667 31591787 -35076218 - MLT1B LTR MaLR -6 384 257 4352 82 5 0 chr20 31591787 31592338 -35075667 - MER41A LTR ERV1 0 554 1 2168 113 8 80 chr20 31592338 31592452 -35075553 - MLT1B LTR MaLR -133 257 136 1979 124 7 0 chr20 31592452 31592742 -35075263 - AluSx SINE Alu -1 311 20 2168 113 8 80 chr20 31592742 31592906 -35075099 - MLT1B LTR MaLR -254 136 14 466 242 70 0 chr20 31592937 31593065 -35074940 + MLT1L LTR MaLR 462 598 -17 536 258 49 18 chr20 31593271 31593434 -35074571 - MER117 DNA MER1_type -23 174 7 424 313 0 9 chr20 31593533 31593645 -35074360 - MIR SINE MIR -70 192 82 275 303 98 0 chr20 31593835 31593957 -35074048 - MIR3 SINE MIR -51 157 24 545 0 0 0 chr20 31594454 31594516 -35073489 + 5S rRNA rRNA 29 90 -31 278 221 0 96 chr20 31594516 31594620 -35073385 - MIR SINE MIR -76 132 39 401 274 129 35 chr20 31594678 31594879 -35073126 + MIR SINE MIR 4 223 -39 2345 128 19 72 chr20 31594937 31595407 -35072598 + MER65A LTR ERV1 1 445 0 2232 110 0 0 chr20 31595459 31595767 -35072238 - AluSx SINE Alu -4 308 1 801 249 93 0 chr20 31595767 31595972 -35072033 - MIR SINE MIR -15 247 24 298 269 48 84 chr20 31596043 31596210 -35071795 - MIR SINE MIR -50 212 52 224 260 0 0 chr20 31597305 31597355 -35070650 - L2 LINE L2 -1 3312 3263 2001 96 41 0 chr20 31597401 31597699 -35070306 + AluSx SINE Alu 1 309 0 279 269 117 23 chr20 31597736 31597956 -35070049 - L2 LINE L2 -233 3039 2801 240 133 22 0 chr20 31598130 31598175 -35069830 + L2 LINE L2 2936 2981 -332 574 216 24 24 chr20 31598229 31598354 -35069651 - MER5A DNA MER1_type -4 185 61 1133 160 15 15 chr20 31598354 31598554 -35069451 + AluJo SINE Alu 1 200 -112 320 132 103 0 chr20 31598563 31598631 -35069374 - MER5A DNA MER1_type -114 75 1 525 214 6 89 chr20 31598641 31598809 -35069196 + MER5A DNA MER1_type 4 157 -32 296 250 135 0 chr20 31598797 31598893 -35069112 + L2 LINE L2 3164 3272 0 * 186 329 0 0 chr20 31598903 31598973 -35069032 + L2 LINE L2 3158 3227 -86 458 222 5 162 chr20 31599024 31599107 -35068898 - MER5B DNA MER1_type 0 178 138 1790 164 3 3 chr20 31599107 31599399 -35068606 + AluJo SINE Alu 13 304 -8 458 222 5 162 chr20 31599399 31599500 -35068505 - MER5B DNA MER1_type -40 138 23 1725 163 7 33 chr20 31599521 31599828 -35068177 - AluJb SINE Alu -13 299 1 907 178 46 0 chr20 31599884 31600058 -35067947 - MER5A DNA MER1_type -7 182 1 280 117 17 17 chr20 31600280 31600340 -35067665 + (TA)n Simple_repeat Simple_repeat 1 60 0 2095 105 0 20 chr20 31600340 31600644 -35067361 - AluSx SINE Alu -14 298 1 564 296 103 0 chr20 31600727 31600940 -35067065 + MIR SINE MIR 14 248 -14 197 206 185 43 chr20 31601266 31601358 -35066647 + MIR SINE MIR 42 146 -62 2539 128 82 5 chr20 31601424 31601837 -35066168 - MER65A LTR ERV1 0 445 1 2135 116 0 7 chr20 31601935 31602236 -35065769 - AluSx SINE Alu -12 300 2 687 140 27 176 chr20 31602299 31602443 -35065562 + MER53 DNA DNA 1 102 -87 1868 94 3 42 chr20 31602443 31602729 -35065276 + AluSg SINE Alu 1 275 -35 687 140 27 176 chr20 31602729 31602806 -35065199 + MER53 DNA DNA 102 189 0 2039 108 14 0 chr20 31602944 31603230 -35064775 + AluSx SINE Alu 1 290 -22 374 279 274 24 chr20 31603546 31603754 -35064251 + MIR SINE MIR 2 261 -1 507 71 35 0 chr20 31604248 31604333 -35063672 + (CGGGGG)n Simple_repeat Simple_repeat 4 91 0 28 48 0 0 chr20 31605179 31605221 -35062784 + GC_rich Low_complexity Low_complexity 1 42 0 221 57 29 0 chr20 31605298 31605333 -35062672 + (CGG)n Simple_repeat Simple_repeat 3 38 0 595 297 95 22 chr20 31605786 31606018 -35061987 - MIR SINE MIR -2 260 12 205 238 0 0 chr20 31606056 31606098 -35061907 + C-rich Low_complexity Low_complexity 5 46 0 425 303 25 0 chr20 31606111 31606233 -35061772 - L2 LINE L2 -1 3271 3147 223 182 0 0 chr20 31606302 31606335 -35061670 - L2 LINE L2 -69 3203 3171 1540 218 266 31 chr20 31606374 31606799 -35061206 + L2 LINE L2 1973 2297 -1017 1811 107 76 0 chr20 31606799 31607061 -35060944 + AluSx SINE Alu 18 299 -13 1540 218 266 31 chr20 31607061 31607309 -35060696 + L2 LINE L2 2297 2804 -510 194 310 17 0 chr20 31607414 31607472 -35060533 + L2 LINE L2 3214 3272 0 1661 135 50 8 chr20 31607475 31607734 -35060271 + AluJb SINE Alu 24 293 -19 399 280 28 19 chr20 31607802 31607909 -35060096 + MIR SINE MIR 30 137 -71 210 304 32 0 chr20 31608380 31608494 -35059511 + MIR SINE MIR 76 193 -69 2357 102 0 16 chr20 31609034 31609348 -35058657 - AluSg1 SINE Alu 0 309 1 224 262 0 0 chr20 31609598 31609640 -35058365 - L2 LINE L2 -15 3257 3216 367 289 21 10 chr20 31609657 31609754 -35058251 + L2 LINE L2 3174 3271 -1 2302 90 3 16 chr20 31609799 31610111 -35057894 - AluSc SINE Alu -1 308 1 609 214 8 8 chr20 31610114 31610231 -35057774 - MIR SINE MIR -115 147 31 477 228 57 70 chr20 31610454 31610612 -35057393 - L2 LINE L2 0 3313 3158 2332 107 0 0 chr20 31610623 31610921 -35057084 + AluSq SINE Alu 1 298 -15 728 175 9 22 chr20 31611116 31611339 -35056666 + CT-rich Low_complexity Low_complexity 1 220 0 1766 171 20 0 chr20 31611341 31611634 -35056371 - AluJb SINE Alu -2 310 12 240 329 57 32 chr20 31611690 31611848 -35056157 - MIR SINE MIR -55 207 46 622 249 176 54 chr20 31612299 31612652 -35055353 - MLT1J LTR MaLR -11 500 105 2137 142 0 0 chr20 31612672 31612975 -35055030 + AluSx SINE Alu 1 303 -9 838 136 0 0 chr20 31612979 31613097 -35054908 + FLAM_C SINE Alu 1 118 -15 258 32 0 0 chr20 31613100 31613131 -35054874 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 576 159 0 0 chr20 31613173 31613261 -35054744 + MER81 DNA DNA 1 88 -26 796 244 98 9 chr20 31613541 31613766 -35054239 - MIR SINE MIR -14 248 4 876 241 89 121 chr20 31613843 31614236 -35053769 - L2 LINE L2 -5 3308 2933 2102 126 17 3 chr20 31614236 31614530 -35053475 + AluSx SINE Alu 3 300 -12 876 241 89 121 chr20 31614530 31614669 -35053336 - L2 LINE L2 -380 2933 2791 474 282 60 60 chr20 31614660 31614961 -35053044 - L2 LINE L2 -165 3107 2807 * 200 348 109 22 chr20 31615216 31615400 -35052605 - L2 LINE L2 -354 2960 2761 * 937 265 22 9 chr20 31615387 31615617 -35052388 - MIR SINE MIR -12 250 18 517 200 35 9 chr20 31616143 31616258 -35051747 - MIR SINE MIR -72 190 73 508 236 157 39 chr20 31616294 31616593 -35051412 - MIR SINE MIR 0 262 25 211 200 0 0 chr20 31616604 31616634 -35051371 + (TAA)n Simple_repeat Simple_repeat 3 35 -12 1779 89 13 0 chr20 31616634 31616859 -35051146 + AluSx SINE Alu 1 228 -84 211 200 0 0 chr20 31616859 31616873 -35051132 + (TAA)n Simple_repeat Simple_repeat 34 47 0 294 188 43 0 chr20 31616932 31617001 -35051004 - MIR SINE MIR -143 119 48 354 281 93 22 chr20 31618103 31618242 -35049763 + MIR SINE MIR 105 253 -9 821 196 27 0 chr20 31619036 31619184 -35048821 - FRAM SINE Alu -24 152 1 628 324 75 16 chr20 31619248 31619818 -35048187 - L1P4 LINE L1 -351 5810 5197 843 173 62 34 chr20 31619837 31619947 -35048058 - MER5A DNA MER1_type -5 184 66 1879 108 90 11 chr20 31619947 31620224 -35047781 - AluSx SINE Alu -13 299 1 843 173 62 34 chr20 31620224 31620292 -35047713 - MER5A DNA MER1_type -123 66 1 461 266 104 26 chr20 31620347 31620501 -35047504 - MIR SINE MIR -96 166 1 611 322 106 14 chr20 31621247 31621595 -35046410 - L2 LINE L2 -2 3270 2891 520 261 90 63 chr20 31621612 31621834 -35046171 + MIR SINE MIR 23 250 -12 1538 149 38 8 chr20 31621987 31622283 -35045722 - AluJo SINE Alu 0 318 15 231 36 0 0 chr20 31622564 31622592 -35045413 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 184 107 0 0 chr20 31622617 31622645 -35045360 - L2 LINE L2 -95 3218 3191 2007 245 55 28 chr20 31623077 31623787 -35044218 + L1MC4a LINE L1 5210 5403 -743 450 53 0 0 chr20 31624065 31624122 -35043883 + (CA)n Simple_repeat Simple_repeat 2 58 0 1002 170 34 24 chr20 31624174 31624380 -35043625 + MLT1F1 LTR MaLR 299 506 -61 773 162 0 0 chr20 31624381 31624498 -35043507 + FLAM_C SINE Alu 2 118 -25 323 143 18 0 chr20 31624558 31624614 -35043391 + MLT1F1 LTR MaLR 511 567 0 202 0 0 83 chr20 31624625 31624661 -35043344 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1698 181 6 35 chr20 31624667 31624981 -35043024 - AluJo SINE Alu -5 307 3 257 247 43 75 chr20 31625102 31625195 -35042810 - L2 LINE L2 0 3313 3224 704 149 0 0 chr20 31625202 31625309 -35042696 + FLAM_A SINE Alu 20 126 -16 340 235 73 15 chr20 31625340 31625476 -35042529 + L1ME2 LINE L1 6011 6154 -10 1648 83 0 0 chr20 31625813 31626029 -35041976 + L1PA8 LINE L1 5957 6172 0 285 231 111 26 chr20 31626296 31626413 -35041592 - MIR3 SINE MIR -80 128 2 511 324 80 77 chr20 31626919 31627063 -35040942 + L2 LINE L2 2870 3012 -260 2066 122 31 0 chr20 31627063 31627350 -35040655 - AluSx SINE Alu -16 296 1 511 324 80 77 chr20 31627350 31627606 -35040399 + L2 LINE L2 3012 3271 -1 309 240 150 20 chr20 31627614 31627714 -35040291 + MIR SINE MIR 50 162 -100 * 352 248 62 56 chr20 31627713 31627874 -35040131 - L2 LINE L2 -104 3209 3048 409 234 36 36 chr20 31628325 31628436 -35039569 + MIR SINE MIR 8 118 -144 266 234 181 0 chr20 31628494 31628588 -35039417 - MIR SINE MIR -85 177 67 313 358 8 22 chr20 31628896 31629030 -35038975 - L1MC4a LINE L1 -1866 5942 5811 4493 164 36 14 chr20 31629039 31629248 -35038757 - L1MB8 LINE L1 -12 6166 5963 800 170 0 30 chr20 31629248 31629383 -35038622 - FLAM_A SINE Alu -2 131 1 4493 164 36 14 chr20 31629383 31630288 -35037717 - L1MB8 LINE L1 -215 5963 5030 1179 161 16 5 chr20 31630288 31630480 -35037525 + AluSg/x SINE Alu 86 279 -33 360 0 0 0 chr20 31630480 31630520 -35037485 + (CA)n Simple_repeat Simple_repeat 1 40 0 2896 163 73 51 chr20 31630520 31631216 -35036789 - L1MB8 LINE L1 -1107 5039 4325 1606 98 0 0 chr20 31631216 31631421 -35036584 - AluSq SINE Alu -20 293 89 2896 163 73 51 chr20 31631421 31631447 -35036558 - L1MB8 LINE L1 -1821 4325 4301 336 259 58 13 chr20 31631429 31631611 -35036394 - L1ME LINE L1 -275 5846 5656 * 1510 265 32 38 chr20 31631637 31631814 -35036191 + L2 LINE L2 2569 2746 -567 2152 118 10 3 chr20 31631814 31632111 -35035894 + AluSx SINE Alu 1 299 -13 1510 265 32 38 chr20 31632111 31632683 -35035322 + L2 LINE L2 2746 3313 0 507 299 142 0 chr20 31632684 31632881 -35035124 + L2 LINE L2 2716 2940 -374 308 200 44 67 chr20 31632886 31632956 -35035049 - MLT1F LTR MaLR 0 542 436 2423 101 0 0 chr20 31632956 31633264 -35034741 + AluSx SINE Alu 1 308 -4 308 200 44 67 chr20 31633264 31633283 -35034722 - MLT1F LTR MaLR -106 436 418 294 324 59 22 chr20 31633389 31633525 -35034480 + L2 LINE L2 3171 3311 -2 270 295 126 11 chr20 31633518 31633613 -35034392 - MIR SINE MIR -72 136 31 * 599 239 99 50 chr20 31633872 31634073 -35033932 - MIR SINE MIR -17 245 35 2313 104 13 0 chr20 31634106 31634415 -35033590 - AluSq SINE Alu 0 313 1 3112 187 41 21 chr20 31634588 31634697 -35033308 + L1ME1 LINE L1 5469 5574 -592 1874 164 10 0 chr20 31634697 31635001 -35033004 + AluJo SINE Alu 1 307 -5 3112 187 41 21 chr20 31635001 31635570 -35032435 + L1ME1 LINE L1 5574 6161 -5 1463 209 62 3 chr20 31635814 31636139 -35031866 + LTR16C LTR ERVL 147 490 -1 310 328 33 0 chr20 31636275 31636397 -35031608 + L1ME LINE L1 5682 5807 -355 782 186 0 0 chr20 31636534 31636652 -35031353 + FLAM_C SINE Alu 1 118 -15 729 186 8 0 chr20 31636666 31636784 -35031221 + 5S rRNA rRNA 1 119 -2 1121 136 21 5 chr20 31636873 31637064 -35030941 + MER20 DNA MER1_type 26 219 0 206 312 52 13 chr20 31637118 31637195 -35030810 - L2 LINE L2 -711 2603 2524 22 0 0 0 chr20 31638875 31638897 -35029108 + AT_rich Low_complexity Low_complexity 1 22 0 201 236 91 0 chr20 31639154 31639209 -35028796 + MIR SINE MIR 89 148 -114 473 265 22 65 chr20 31639308 31639434 -35028571 + MIR SINE MIR 76 193 -69 2464 88 0 0 chr20 31639434 31639740 -35028265 + AluSx SINE Alu 1 306 -6 473 265 22 65 chr20 31639740 31639798 -35028207 + MIR SINE MIR 193 252 -10 831 166 89 0 chr20 31639829 31639998 -35028007 - MER5A DNA MER1_type -5 184 1 1282 83 0 6 chr20 31640417 31640585 -35027420 + AluSp SINE Alu 147 313 0 2407 43 0 0 chr20 31640605 31640903 -35027102 + AluY SINE Alu 3 300 0 317 383 43 14 chr20 31641017 31641226 -35026779 - L1MC/D LINE L1 -1972 5836 5622 380 253 55 25 chr20 31641488 31641690 -35026315 - L1ME4a LINE L1 -153 5968 5761 3284 163 35 58 chr20 31641732 31642310 -35025695 - L1MB5 LINE L1 -1 6173 5614 2468 54 0 10 chr20 31642310 31642608 -35025397 + AluY SINE Alu 1 295 -16 3284 163 35 58 chr20 31642608 31642766 -35025239 - L1MB5 LINE L1 -560 5614 5454 336 291 58 10 chr20 31642884 31642987 -35025018 + L2 LINE L2 3186 3293 -20 508 250 66 55 chr20 31643089 31643345 -35024660 + MER102b DNA MER1_type 81 339 -2 2061 148 3 0 chr20 31643397 31643695 -35024310 + AluJb SINE Alu 1 299 -13 344 180 0 0 chr20 31643695 31643756 -35024249 - MIR SINE MIR -79 129 69 320 311 12 9 chr20 31644179 31644315 -35023690 + MIR SINE MIR 7 141 -67 2237 95 10 3 chr20 31644328 31644623 -35023382 + AluSq SINE Alu 1 297 -16 375 23 0 0 chr20 31644684 31644728 -35023277 + (CA)n Simple_repeat Simple_repeat 2 45 0 1936 211 68 23 chr20 31644747 31645217 -35022788 - LTR16C LTR ERVL 0 491 1 523 178 22 35 chr20 31645358 31645590 -35022415 + CT-rich Low_complexity Low_complexity 1 229 0 1916 141 30 30 chr20 31645590 31645894 -35022111 - AluJo SINE Alu -8 304 1 225 200 50 17 chr20 31646147 31646207 -35021798 - Charlie8 DNA MER1_type -2162 255 194 2155 117 0 66 chr20 31646288 31646621 -35021384 - AluSx SINE Alu -1 311 1 960 229 76 113 chr20 31646816 31647051 -35020954 - LTR16B LTR ERVL -5 459 250 2516 84 0 0 chr20 31647051 31647360 -35020645 - AluSg SINE Alu -1 309 1 960 229 76 113 chr20 31647360 31647600 -35020405 - LTR16B LTR ERVL -214 250 2 707 247 93 48 chr20 31647608 31648015 -35019990 - L2 LINE L2 -173 3140 2714 2419 90 0 0 chr20 31648015 31648316 -35019689 - AluSx SINE Alu -9 303 3 707 247 93 48 chr20 31648316 31648343 -35019662 - L2 LINE L2 -599 2714 2690 223 286 24 37 chr20 31648333 31648425 -35019580 - MIR SINE MIR -130 78 3 * 280 260 167 10 chr20 31649132 31649228 -35018777 + MIR SINE MIR 34 144 -64 1690 182 25 3 chr20 31649341 31649627 -35018378 - AluJo SINE Alu -20 292 1 324 242 113 24 chr20 31649824 31649948 -35018057 - MLT1K LTR MaLR 0 588 454 705 295 22 37 chr20 31650005 31650071 -35017934 - MLT1K LTR MaLR -317 271 206 2317 81 37 3 chr20 31650071 31650368 -35017637 - AluSx SINE Alu -1 311 5 705 295 22 37 chr20 31650368 31650569 -35017436 - MLT1K LTR MaLR -382 206 8 594 288 6 6 chr20 31650576 31650736 -35017269 - MIR3 SINE MIR -39 169 10 565 259 7 22 chr20 31651149 31651284 -35016721 - MIR SINE MIR -60 148 16 451 275 25 8 chr20 31651290 31651410 -35016595 - MER5A DNA MER1_type -2 187 66 1858 255 39 26 chr20 31651413 31651982 -35016023 - MLT1K LTR MaLR -3 585 10 383 215 239 31 chr20 31652017 31652147 -35015858 - MER5A DNA MER1_type -29 160 4 2298 113 7 3 chr20 31652382 31652691 -35015314 - AluSx SINE Alu -2 310 1 1094 121 65 23 chr20 31653297 31653512 -35014493 - L1MB3 LINE L1 -7 6176 5953 189 0 0 0 chr20 31653610 31653631 -35014374 + (T)n Simple_repeat Simple_repeat 1 21 0 224 302 0 47 chr20 31653693 31653779 -35014226 - L2 LINE L2 0 3313 3232 882 194 79 2 chr20 31653794 31654052 -35013953 + MER33 DNA MER1_type 1 253 -71 259 99 42 70 chr20 31654078 31654093 -35013912 + A-rich Low_complexity Low_complexity 1 15 -54 2227 106 0 22 chr20 31654093 31654413 -35013592 + AluSp SINE Alu 1 313 0 259 99 42 70 chr20 31654413 31654468 -35013537 + A-rich Low_complexity Low_complexity 15 69 0 180 0 0 0 chr20 31654487 31654507 -35013498 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 1600 148 29 81 chr20 31654722 31655032 -35012973 + AluJb SINE Alu 1 294 -18 300 300 118 0 chr20 31655205 31655315 -35012690 - MIR SINE MIR -10 252 130 194 184 0 0 chr20 31655472 31655510 -35012495 - MIR SINE MIR -89 119 82 1168 275 108 26 chr20 31656158 31656902 -35011103 + L2 LINE L2 2493 3313 0 494 155 0 47 chr20 31656936 31657084 -35010921 + GA-rich Low_complexity Low_complexity 2 142 0 325 238 24 0 chr20 31658368 31658452 -35009553 - MIR SINE MIR -11 251 166 1141 138 11 16 chr20 31658480 31658669 -35009336 + AluJo SINE Alu 122 309 -3 2002 104 82 0 chr20 31658921 31659200 -35008805 + AluSg SINE Alu 1 302 -8 184 378 63 0 chr20 31659218 31659345 -35008660 + MIR3 SINE MIR 62 196 -12 474 286 169 48 chr20 31660844 31661200 -35006805 + L2 LINE L2 2910 3308 -5 2022 137 0 32 chr20 31661268 31661581 -35006424 - AluJb SINE Alu -9 303 1 249 277 119 0 chr20 31661591 31661692 -35006313 - L2 LINE L2 -1 3271 3159 524 15 15 0 chr20 31661761 31661826 -35006179 + (TCCA)n Simple_repeat Simple_repeat 1 66 0 2097 107 7 20 chr20 31662119 31662417 -35005588 + AluSx SINE Alu 1 294 -18 431 203 209 38 chr20 31662706 31662864 -35005141 - MER5A DNA MER1_type -4 185 1 2187 121 7 0 chr20 31662882 31663187 -35004818 + AluSx SINE Alu 1 307 -5 279 0 0 0 chr20 31663590 31663621 -35004384 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2236 79 11 0 chr20 31663623 31663900 -35004105 - AluSp SINE Alu -31 282 3 329 294 123 16 chr20 31663903 31664090 -35003915 - L1MC/D LINE L1 -1983 5825 5619 2359 54 0 37 chr20 31664102 31664423 -35003582 - AluY SINE Alu 0 310 1 891 232 0 37 chr20 31664511 31664653 -35003352 + MIR SINE MIR 2 137 -125 2342 115 0 0 chr20 31664653 31664958 -35003047 + AluSx SINE Alu 1 305 -7 891 232 0 37 chr20 31664958 31665005 -35003000 + MIR SINE MIR 137 184 -78 355 292 9 24 chr20 31665009 31665132 -35002873 - MIR SINE MIR -59 149 45 589 299 140 0 chr20 31665336 31665543 -35002462 + MER69 DNA AcHobo 1 236 -2290 295 202 21 75 chr20 31665551 31665645 -35002360 + MER69 DNA AcHobo 2436 2524 -2 2259 99 0 10 chr20 31666248 31666575 -35001430 - AluSc SINE Alu 0 309 1 1545 172 3 65 chr20 31666577 31666867 -35001138 - AluJb SINE Alu -17 295 24 1530 184 0 4 chr20 31666924 31667185 -35000820 + AluJo SINE Alu 41 300 -12 900 190 41 36 chr20 31668120 31668315 -34999690 + MIR SINE MIR 10 205 -57 414 182 129 77 chr20 31668378 31668438 -34999567 - MIR SINE MIR -20 242 187 2174 123 0 0 chr20 31668438 31668738 -34999267 + AluSx SINE Alu 1 300 -12 414 182 129 77 chr20 31668738 31668847 -34999158 - MIR SINE MIR -75 187 64 538 114 0 0 chr20 31668896 31668975 -34999030 + MADE1 DNA Mariner 2 80 0 2458 176 86 2 chr20 31668979 31669445 -34998560 - MLT1D LTR MaLR 0 505 1 686 222 51 40 chr20 31669613 31669863 -34998142 - MIR SINE MIR -1 261 3 194 121 61 0 chr20 31671010 31671043 -34996962 - L2 LINE L2 -24 3248 3214 2052 133 0 10 chr20 31671309 31671618 -34996387 + AluSg SINE Alu 1 306 -4 433 319 56 19 chr20 31671741 31672074 -34995931 - L2 LINE L2 -228 3044 2699 2294 67 0 0 chr20 31672080 31672386 -34995619 - AluY SINE Alu 0 317 12 474 269 23 63 chr20 31672398 31672573 -34995432 - MIR SINE MIR -74 188 21 1523 168 60 47 chr20 31673380 31673533 -34994472 - AluJo SINE Alu 0 302 153 189 74 0 0 chr20 31673533 31673560 -34994445 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1429 172 49 49 chr20 31673560 31673724 -34994281 - AluJo SINE Alu -27 285 119 2333 91 0 3 chr20 31673724 31674020 -34993985 - AluY SINE Alu -16 295 1 1429 172 49 49 chr20 31674020 31674140 -34993865 - AluJo SINE Alu -192 120 1 1523 168 60 47 chr20 31674140 31674283 -34993722 - AluJo SINE Alu -148 154 1 296 44 0 22 chr20 31674566 31674611 -34993394 - MADE1 DNA Mariner -1 79 36 464 209 104 0 chr20 31674936 31675051 -34992954 - MLT1H1 LTR MaLR -7 548 422 262 129 48 48 chr20 31675379 31675441 -34992564 - MIR SINE MIR -100 162 101 386 317 41 0 chr20 31675469 31675592 -34992413 - L2 LINE L2 -24 3289 3162 621 263 88 29 chr20 31675841 31676046 -34991959 - L2 LINE L2 -194 3078 2862 204 224 52 17 chr20 31676667 31676725 -34991280 + MIR3 SINE MIR 147 206 -2 304 296 102 10 chr20 31676892 31676990 -34991015 + MIR SINE MIR 30 136 -72 504 280 171 19 chr20 31677015 31677226 -34990779 - MIR SINE MIR -19 243 1 501 300 12 25 chr20 31677373 31677533 -34990472 + MIR SINE MIR 12 169 -93 1411 188 70 44 chr20 31677786 31678084 -34989921 + AluJo SINE Alu 5 310 -2 191 306 0 0 chr20 31678390 31678439 -34989566 + MIR SINE MIR 125 173 -89 947 281 78 11 chr20 31678595 31679016 -34988989 + L2 LINE L2 2656 3112 -201 2305 117 0 0 chr20 31679016 31679323 -34988682 - AluSx SINE Alu -5 307 1 947 281 78 11 chr20 31679323 31679355 -34988650 + L2 LINE L2 3112 3140 -173 414 100 0 0 chr20 31679569 31679629 -34988376 + (TG)n Simple_repeat Simple_repeat 2 61 0 653 234 35 74 chr20 31680358 31680476 -34987529 + L1ME3 LINE L1 5703 5824 -340 1609 181 3 28 chr20 31680476 31680763 -34987242 + AluJo SINE Alu 1 280 -32 1301 67 0 6 chr20 31680764 31680942 -34987063 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 653 234 35 74 chr20 31680942 31681077 -34986928 + L1ME3 LINE L1 5823 5948 -216 * 2029 158 62 62 chr20 31681072 31681340 -34986665 + L1MB8 LINE L1 5680 5950 -228 2297 102 7 3 chr20 31681340 31681635 -34986370 - AluSx SINE Alu -16 296 1 2029 158 62 62 chr20 31681635 31681865 -34986140 + L1MB8 LINE L1 5949 6178 0 250 245 0 0 chr20 31681868 31681921 -34986084 + L1ME3 LINE L1 5937 5989 -173 2079 126 0 0 chr20 31681936 31682263 -34985742 - AluSx SINE Alu 0 332 6 2493 79 0 10 chr20 31682295 31682600 -34985405 + AluSg SINE Alu 1 302 -8 1742 182 0 0 chr20 31682600 31682874 -34985131 - AluJo SINE Alu -31 281 7 594 269 5 16 chr20 31682884 31683070 -34984935 + L1ME3 LINE L1 5979 6162 0 2037 158 0 0 chr20 31683076 31683373 -34984632 + AluJo SINE Alu 1 297 -15 2388 89 0 6 chr20 31683376 31683689 -34984316 + AluY SINE Alu 1 311 0 246 116 0 0 chr20 31683793 31683836 -34984169 + (CA)n Simple_repeat Simple_repeat 2 44 0 306 316 0 0 chr20 31683836 31683950 -34984055 + L1M4 LINE L1 2703 2816 -3330 1597 162 46 46 chr20 31683974 31684099 -34983906 + AluJo SINE Alu 2 126 -186 1816 132 64 0 chr20 31684099 31684409 -34983596 - AluSx SINE Alu 0 327 1 1597 162 46 46 chr20 31684409 31684585 -34983420 + AluJo SINE Alu 125 304 -8 978 267 53 53 chr20 31685262 31685429 -34982576 + L2 LINE L2 2322 2488 -826 2613 68 0 0 chr20 31685429 31685736 -34982269 - AluSx SINE Alu -5 307 1 978 267 53 53 chr20 31685736 31685980 -34982025 + L2 LINE L2 2487 2733 -581 1797 174 0 26 chr20 31685981 31686286 -34981719 - AluJo SINE Alu -15 297 1 454 278 224 31 chr20 31686336 31686760 -34981245 - L2 LINE L2 -600 2714 2209 295 250 54 35 chr20 31687064 31687248 -34980757 - MLT1L LTR MaLR -249 366 113 262 217 0 84 chr20 31687714 31687797 -34980208 + MIR3 SINE MIR 118 193 -15 943 190 0 6 chr20 31688055 31688218 -34979787 + FRAM SINE Alu 2 163 -3 925 218 98 37 chr20 31688301 31688381 -34979624 - MLT1D LTR MaLR 0 626 552 2148 117 3 0 chr20 31688381 31688663 -34979342 + AluSx SINE Alu 1 283 -29 237 65 0 0 chr20 31688663 31688694 -34979311 + (CATA)n Simple_repeat Simple_repeat 2 32 0 925 218 98 37 chr20 31688694 31688726 -34979279 - MLT1D LTR MaLR -74 552 523 240 35 0 0 chr20 31688726 31688755 -34979250 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 925 218 98 37 chr20 31688755 31689133 -34978872 - MLT1D LTR MaLR -103 523 7 305 272 48 48 chr20 31689857 31690002 -34978003 + MLT1I LTR MaLR 58 240 -265 2051 160 30 52 chr20 31690329 31690439 -34977566 + L1MC2 LINE L1 5093 5204 -1140 2453 103 0 0 chr20 31690439 31690750 -34977255 + AluSq SINE Alu 1 311 -2 2051 160 30 52 chr20 31690750 31691246 -34976759 + L1MC2 LINE L1 5204 5828 -516 1805 165 3 32 chr20 31691255 31691564 -34976441 + AluJo SINE Alu 4 303 -9 2047 128 21 0 chr20 31691568 31691856 -34976149 + AluJb SINE Alu 1 294 -18 2044 142 0 16 chr20 31691857 31692167 -34975838 + AluSx SINE Alu 1 305 -7 2274 110 0 3 chr20 31692169 31692479 -34975526 + AluSq SINE Alu 1 309 -4 233 125 54 0 chr20 31692492 31692548 -34975457 + (TA)n Simple_repeat Simple_repeat 2 60 0 2462 144 62 13 chr20 31692577 31693353 -34974652 - L1M2 LINE L1 -574 5738 4922 678 168 14 7 chr20 31693353 31693494 -34974511 + L1MB4 LINE L1 6037 6180 0 2152 124 0 29 chr20 31693500 31693815 -34974190 + AluSx SINE Alu 1 306 -6 287 310 14 0 chr20 31693815 31693886 -34974119 - MIR SINE MIR -163 99 28 580 264 120 30 chr20 31694257 31694699 -34973306 - MLT1H LTR MaLR -104 451 1 318 271 33 53 chr20 31694901 31695054 -34972951 - MIR SINE MIR -45 217 69 225 247 86 0 chr20 31695208 31695289 -34972716 - MIR SINE MIR -71 191 104 224 231 39 51 chr20 31695298 31695376 -34972629 - L2 LINE L2 -78 3235 3159 501 246 10 80 chr20 31696491 31696690 -34971315 - MER5A DNA MER1_type -3 186 2 989 304 98 35 chr20 31697521 31697978 -34970027 - L2 LINE L2 0 3313 2828 1552 156 67 32 chr20 31698207 31698490 -34969515 + AluJb SINE Alu 2 294 -18 2249 123 7 0 chr20 31698492 31698800 -34969205 + AluSx SINE Alu 1 310 -2 2374 158 65 38 chr20 31699718 31700245 -34967760 - L1MB7 LINE L1 0 6184 5644 2039 140 10 16 chr20 31700402 31700710 -34967295 - AluJo SINE Alu -5 307 2 472 265 42 54 chr20 31700859 31701025 -34966980 + MIR3 SINE MIR 10 173 -35 196 288 0 34 chr20 31701721 31701780 -34966225 + MIR SINE MIR 39 95 -113 * 318 307 52 26 chr20 31701772 31701847 -34966158 + MIR SINE MIR 63 135 -127 627 149 35 28 chr20 31701847 31701886 -34966119 - L1MB4 LINE L1 0 6180 6143 2330 105 0 25 chr20 31701886 31702200 -34965805 - AluSx SINE Alu -6 306 1 627 149 35 28 chr20 31702200 31702301 -34965704 - L1MB4 LINE L1 -37 6143 6039 318 307 52 26 chr20 31702301 31702378 -34965627 + MIR SINE MIR 135 219 -43 230 0 33 0 chr20 31702720 31702750 -34965255 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 408 125 0 0 chr20 31702903 31702967 -34965038 + (T)n Simple_repeat Simple_repeat 1 64 0 2141 107 7 19 chr20 31703017 31703325 -34964680 + AluSx SINE Alu 2 305 -7 699 126 0 59 chr20 31704509 31704628 -34963377 - FRAM SINE Alu -14 162 51 1769 154 29 4 chr20 31704666 31705004 -34963001 - AluJb SINE Alu 0 348 4 258 154 0 62 chr20 31705063 31705128 -34962877 + L1MA8 LINE L1 6220 6280 -11 332 195 0 0 chr20 31705131 31705197 -34962808 + Alu SINE Alu 1 49 -254 * 440 17 0 17 chr20 31705195 31705255 -34962750 - MSTB1 LTR MaLR -15 417 359 1186 182 0 10 chr20 31705255 31705453 -34962552 + AluJb SINE Alu 1 196 -116 5869 196 70 30 chr20 31705454 31707198 -34960807 - L1MB7 LINE L1 -716 5462 3659 6658 77 15 32 chr20 31707282 31709291 -34958714 - SVA Other Other -518 1384 1 213 39 0 0 chr20 31709293 31709319 -34958686 + (GGGAGA)n Simple_repeat Simple_repeat 1 26 0 235 308 149 0 chr20 31709452 31709647 -34958358 - L1MC/D LINE L1 -2331 5477 5254 198 0 0 0 chr20 31709924 31709946 -34958059 + (TA)n Simple_repeat Simple_repeat 2 23 0 1587 176 35 28 chr20 31709946 31710236 -34957769 - AluJo SINE Alu -20 292 1 205 286 36 24 chr20 31710551 31710635 -34957370 + MIR SINE MIR 38 122 -86 2302 118 0 0 chr20 31710669 31710965 -34957040 - AluSx SINE Alu -16 296 1 202 204 0 23 chr20 31711011 31711055 -34956950 + (CTTTG)n Simple_repeat Simple_repeat 3 45 0 691 242 102 42 chr20 31711308 31711523 -34956482 - MIR SINE MIR -15 247 20 606 167 313 0 chr20 31711533 31711677 -34956328 + MER5A DNA MER1_type 1 189 0 1988 122 58 7 chr20 31711753 31712048 -34955957 - AluJb SINE Alu -2 310 1 351 0 0 0 chr20 31712147 31712186 -34955819 + (CA)n Simple_repeat Simple_repeat 2 40 0 234 330 53 11 chr20 31712186 31712280 -34955725 + L2 LINE L2 2682 2779 -535 668 213 131 0 chr20 31712284 31712444 -34955561 + MER5A DNA MER1_type 4 187 -2 328 210 16 0 chr20 31712743 31712805 -34955200 + L2 LINE L2 3242 3304 -9 2363 89 7 0 chr20 31712809 31713112 -34954893 - AluSq SINE Alu -8 305 1 700 243 128 31 chr20 31713132 31713358 -34954647 + MIR SINE MIR 15 262 0 389 226 107 79 chr20 31713420 31713597 -34954408 + MIR SINE MIR 58 239 -23 189 258 48 32 chr20 31714149 31714211 -34953794 - MIR SINE MIR -65 143 81 198 304 122 35 chr20 31714396 31714511 -34953494 - MER5A DNA MER1_type 0 189 65 2216 115 36 17 chr20 31714511 31714867 -34953138 - L1PB4 LINE L1 0 6156 5794 333 0 0 0 chr20 31714869 31714906 -34953099 + (TG)n Simple_repeat Simple_repeat 2 38 0 1888 163 7 3 chr20 31715290 31715584 -34952421 + AluJo SINE Alu 1 295 -17 311 295 85 44 chr20 31715589 31715676 -34952329 - L1ME LINE L1 -297 5824 5742 2056 111 48 7 chr20 31715676 31715965 -34952040 - AluSx SINE Alu -11 301 1 311 295 85 44 chr20 31715965 31716172 -34951833 - L1ME LINE L1 -379 5742 5518 723 161 0 0 chr20 31716975 31717099 -34950906 + L1MD3 LINE L1 7872 7995 0 252 0 0 0 chr20 31717560 31717588 -34950417 + (TG)n Simple_repeat Simple_repeat 2 29 0 192 97 0 0 chr20 31717588 31717619 -34950386 + (TTGG)n Simple_repeat Simple_repeat 4 34 0 1097 224 142 73 chr20 31717929 31718204 -34949801 - L2 LINE L2 -14 3299 2979 1922 141 39 0 chr20 31718204 31718487 -34949518 + AluSq SINE Alu 5 298 -15 1097 224 142 73 chr20 31718487 31718663 -34949342 - L2 LINE L2 -334 2979 2817 366 242 5 59 chr20 31719328 31719514 -34948491 + (TCTCTG)n Simple_repeat Simple_repeat 4 179 0 487 288 74 70 chr20 31719684 31719903 -34948102 - MIR SINE MIR -6 256 34 1835 155 0 28 chr20 31719903 31720193 -34947812 - AluJo SINE Alu -30 282 1 487 288 74 70 chr20 31720193 31720216 -34947789 - MIR SINE MIR -228 34 13 660 234 179 21 chr20 31720503 31720739 -34947266 + MER46C DNA MER2_type 2 294 -44 2296 107 0 0 chr20 31720739 31721030 -34946975 - AluSx SINE Alu 0 312 22 660 234 179 21 chr20 31721030 31721084 -34946921 + MER46C DNA MER2_type 294 338 0 330 282 106 49 chr20 31721250 31721392 -34946613 - L1ME4a LINE L1 -247 5874 5725 713 269 129 47 chr20 31721398 31721800 -34946205 - L2 LINE L2 -1 3312 2878 382 273 29 29 chr20 31721800 31721939 -34946066 - L1ME4a LINE L1 -402 5719 5581 393 290 43 22 chr20 31722314 31722452 -34945553 - MIR SINE MIR 0 262 122 229 185 222 62 chr20 31722848 31722929 -34945076 - L2 LINE L2 -21 3292 3199 197 205 154 39 chr20 31723475 31723553 -34944452 + MIR SINE MIR 83 169 -93 387 314 59 7 chr20 31723579 31723732 -34944273 + L2 LINE L2 3099 3259 -13 183 42 0 0 chr20 31723794 31723818 -34944187 + (CAT)n Simple_repeat Simple_repeat 1 24 0 648 215 132 83 chr20 31723827 31724055 -34943950 - MIR SINE MIR -20 242 4 282 406 0 8 chr20 31724096 31724219 -34943786 - MIR SINE MIR -121 141 20 1934 126 0 86 chr20 31724439 31724764 -34943241 + AluSx SINE Alu 15 311 -1 182 311 189 0 chr20 31724936 31725026 -34942979 + MIR SINE MIR 37 143 -65 357 276 232 59 chr20 31725286 31726185 -34941820 + L2 LINE L2 2211 3272 0 183 325 65 0 chr20 31726490 31726567 -34941438 - L2 LINE L2 -54 3218 3137 571 231 137 16 chr20 31726635 31726817 -34941188 - MIR SINE MIR -10 252 49 2509 79 3 0 chr20 31727015 31727320 -34940685 + AluY SINE Alu 1 306 -5 314 206 284 0 chr20 31728256 31728358 -34939647 + MIR SINE MIR 12 142 -120 259 261 77 39 chr20 31728832 31728962 -34939043 - L2 LINE L2 -486 2828 2694 258 295 107 8 chr20 31729391 31729515 -34938490 - MIR SINE MIR -69 139 58 373 223 69 62 chr20 31729968 31730020 -34937985 + L2 LINE L2 3142 3192 -80 2296 113 0 0 chr20 31730020 31730322 -34937683 - AluSg SINE Alu -8 302 1 373 223 69 62 chr20 31730322 31730399 -34937606 + L2 LINE L2 3192 3272 0 1676 181 25 35 chr20 31730706 31731021 -34936984 + AluJo SINE Alu 1 312 0 773 272 92 34 chr20 31731741 31732035 -34935970 - L2 LINE L2 -1 3312 3002 206 281 115 21 chr20 31732158 31732254 -34935751 - MIR SINE MIR 0 262 158 191 279 207 14 chr20 31732400 31732540 -34935465 - L2 LINE L2 -255 3017 2851 2166 108 10 7 chr20 31733061 31733356 -34934649 - AluSc SINE Alu -13 296 1 302 296 124 44 chr20 31733368 31733618 -34934387 + L1ME4a LINE L1 5017 5286 -860 2272 131 0 0 chr20 31733649 31733954 -34934051 + AluSx SINE Alu 1 305 -7 1688 133 8 0 chr20 31733967 31734215 -34933790 + AluSx SINE Alu 59 308 -4 263 276 67 80 chr20 31734287 31734512 -34933493 + L1ME4a LINE L1 5383 5604 -517 857 165 0 0 chr20 31734514 31734647 -34933358 + FLAM_C SINE Alu 1 133 0 2659 59 0 0 chr20 31734742 31735048 -34932957 - AluY SINE Alu -5 306 1 230 260 244 4 chr20 31735049 31735299 -34932706 + L1ME4a LINE L1 5796 6105 -16 643 296 44 15 chr20 31736231 31736437 -34931568 + MIR SINE MIR 31 242 -20 192 40 0 0 chr20 31736614 31736639 -34931366 + (CTGGGG)n Simple_repeat Simple_repeat 5 29 0 291 218 167 0 chr20 31737142 31737220 -34930785 + MIR3 SINE MIR 108 198 -10 1342 111 0 0 chr20 31737747 31737928 -34930077 - AluSp SINE Alu 0 313 133 2496 75 0 28 chr20 31737928 31738248 -34929757 - AluY SINE Alu 0 311 1 241 274 167 20 chr20 31739159 31739261 -34928744 + MIR SINE MIR 30 146 -62 1940 159 17 0 chr20 31739546 31739842 -34928163 + AluJo SINE Alu 2 302 -10 497 260 39 64 chr20 31739922 31740126 -34927879 + MIR SINE MIR 3 201 -61 1519 147 37 16 chr20 31740218 31740463 -34927542 - AluJb SINE Alu -6 306 57 2367 93 3 0 chr20 31740531 31740831 -34927174 - AluSx SINE Alu -11 301 1 436 278 32 117 chr20 31740844 31741092 -34926913 - L2 LINE L2 -50 3222 2996 271 274 68 27 chr20 31742075 31742221 -34925784 - L1ME4a LINE L1 -23 6098 5947 199 244 39 13 chr20 31742249 31742327 -34925678 - MIR SINE MIR 0 262 183 1202 126 55 0 chr20 31742466 31742665 -34925340 + MER2 DNA MER2_type 1 210 -135 1724 146 40 40 chr20 31742684 31742985 -34925020 - AluJb SINE Alu -11 301 1 2142 111 0 60 chr20 31742998 31743331 -34924674 - AluSq SINE Alu 0 313 1 317 225 62 0 chr20 31743401 31743481 -34924524 - L1ME4a LINE L1 -177 5944 5860 382 167 15 0 chr20 31744295 31744361 -34923644 + MIR SINE MIR 87 153 -109 233 358 67 0 chr20 31744659 31744779 -34923226 + MIR SINE MIR 64 191 -71 2432 81 0 3 chr20 31744779 31745076 -34922929 + AluSg SINE Alu 1 296 -14 191 250 36 18 chr20 31745635 31745691 -34922314 + MIR SINE MIR 82 138 -70 656 255 26 81 chr20 31746530 31746747 -34921258 + MIR SINE MIR 7 208 -54 2492 78 0 7 chr20 31746747 31747056 -34920949 + AluSc SINE Alu 1 307 -2 656 255 26 81 chr20 31747056 31747109 -34920896 + MIR SINE MIR 208 262 0 538 167 87 16 chr20 31747121 31747247 -34920758 - L1ME1 LINE L1 0 6235 6101 429 264 114 50 chr20 31747664 31747884 -34920121 + L1M4 LINE L1 2940 3173 -2973 574 299 62 68 chr20 31748362 31748484 -34919521 - L3 LINE CR1 -7 1570 1449 1262 136 61 9 chr20 31748484 31748697 -34919308 + MER58A DNA MER1_type 1 224 0 574 299 62 68 chr20 31748697 31748882 -34919123 - L3 LINE CR1 -128 1449 1265 240 178 14 55 chr20 31748883 31748956 -34919049 - MLT1K LTR MaLR -2 586 517 262 245 38 57 chr20 31748958 31749064 -34918941 - MLT1K LTR MaLR -47 541 438 2168 83 4 7 chr20 31749070 31749348 -34918657 + AluSc SINE Alu 27 303 -6 321 224 0 30 chr20 31749349 31749416 -34918589 + L1MC4 LINE L1 6652 6716 -1326 341 318 15 15 chr20 31749424 31749556 -34918449 - MLT1K LTR MaLR -175 413 282 2395 86 3 0 chr20 31749685 31749989 -34918016 - AluSx SINE Alu -7 305 1 1499 195 43 14 chr20 31750319 31750601 -34917404 + AluJo SINE Alu 1 290 -22 26 50 0 0 chr20 31753243 31753283 -34914722 + AT_rich Low_complexity Low_complexity 1 40 0 477 249 106 110 chr20 31753649 31754123 -34913882 - MLT1K LTR MaLR -3 473 2 488 226 24 101 chr20 31754265 31754433 -34913572 - MIR SINE MIR -13 249 95 189 0 0 0 chr20 31754543 31754564 -34913441 + (TG)n Simple_repeat Simple_repeat 2 22 0 269 264 124 66 chr20 31754564 31754685 -34913320 - L1MA10 LINE L1 -40 6294 6167 1805 107 67 130 chr20 31754714 31755045 -34912960 + MSTB1 LTR MaLR 14 364 -68 629 182 33 8 chr20 31755045 31755166 -34912839 + FLAM_A SINE Alu 2 125 -8 1805 107 67 130 chr20 31755166 31755196 -34912809 + MSTB1 LTR MaLR 364 394 -38 2027 107 79 0 chr20 31755196 31755476 -34912529 + AluSx SINE Alu 1 302 -10 1805 107 67 130 chr20 31755476 31755560 -34912445 + MSTB1 LTR MaLR 394 432 0 268 263 42 21 chr20 31755560 31755655 -34912350 - L1ME2 LINE L1 -167 6064 5968 1232 165 63 107 chr20 31756921 31757425 -34910580 - L1ME2 LINE L1 -557 5678 5193 786 161 0 36 chr20 31757425 31757562 -34910443 - FLAM_A SINE Alu -1 132 1 1232 165 63 107 chr20 31757562 31757632 -34910373 - L1ME2 LINE L1 -1042 5193 5121 1540 191 17 20 chr20 31757635 31757928 -34910077 - AluJo SINE Alu -8 304 13 381 176 14 27 chr20 31757868 31757942 -34910063 - FRAM/FAM SINE Alu -94 72 1 1727 175 19 19 chr20 31757954 31758262 -34909743 - AluJo SINE Alu -4 308 1 1795 177 43 47 chr20 31758264 31758443 -34909562 - L1ME2 LINE L1 -1582 4633 4455 2270 73 49 0 chr20 31758443 31758729 -34909276 - AluSp SINE Alu -11 302 3 1795 177 43 47 chr20 31758729 31758742 -34909263 - L1ME2 LINE L1 -1760 4455 4443 2013 152 0 13 chr20 31758742 31759051 -34908954 - AluSx SINE Alu -7 305 1 1795 177 43 47 chr20 31759051 31759342 -34908663 - L1ME2 LINE L1 -1772 4443 4151 2047 113 17 17 chr20 31759342 31759674 -34908331 - AluSx SINE Alu 0 312 1 2885 215 99 8 chr20 31759684 31760555 -34907450 - L1ME2 LINE L1 -3044 3171 2222 2393 91 7 0 chr20 31760556 31760853 -34907152 - AluSx SINE Alu -13 299 1 362 193 0 68 chr20 31760853 31760941 -34907064 - L1ME2 LINE L1 -5321 1075 994 774 143 20 0 chr20 31760942 31761089 -34906916 - L1MB4 LINE L1 -2 6178 6029 2294 96 7 10 chr20 31761090 31761391 -34906614 + AluSx SINE Alu 1 300 -12 459 52 0 0 chr20 31761392 31761450 -34906555 + (CCCCCT)n Simple_repeat Simple_repeat 3 60 0 5619 66 29 48 chr20 31761450 31762490 -34905515 + SVA Other Other 58 868 -520 1937 91 13 74 chr20 31762557 31763019 -34904986 + SVA Other Other 433 866 -520 3468 76 25 67 chr20 31763036 31763677 -34904328 + SVA Other Other 433 1046 -340 182 62 31 0 chr20 31763678 31763710 -34904295 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 3566 168 64 24 chr20 31763712 31763929 -34904076 - L1MB3 LINE L1 -143 6040 5833 2059 118 3 35 chr20 31763929 31764242 -34903763 + AluSx SINE Alu 1 303 -9 3566 168 64 24 chr20 31764242 31764874 -34903131 - L1MB3 LINE L1 -350 5833 5145 919 205 0 0 chr20 31764874 31765035 -34902970 - FAM SINE Alu -14 161 1 3566 168 64 24 chr20 31765035 31765368 -34902637 - L1MB3 LINE L1 -1038 5145 4826 2712 250 62 24 chr20 31765365 31766268 -34901737 - L1ME2 LINE L1 -5425 971 35 * 2325 98 3 13 chr20 31766277 31766583 -34901422 - AluSq SINE Alu -10 303 1 1859 132 3 51 chr20 31766644 31766811 -34901194 - AluJb SINE Alu 0 301 153 2579 51 0 35 chr20 31766811 31767123 -34900882 - AluY SINE Alu -10 301 1 1859 132 3 51 chr20 31767123 31767270 -34900735 - AluJb SINE Alu -148 153 1 555 298 148 23 chr20 31767626 31767931 -34900074 + MLT1L LTR MaLR 173 515 -100 200 304 14 29 chr20 31768697 31768766 -34899239 + L3 LINE CR1 1387 1454 -123 881 231 159 50 chr20 31768868 31768951 -34899054 - L2 LINE L2 0 3313 3240 2218 115 14 0 chr20 31768951 31769246 -34898759 + AluSx SINE Alu 3 301 -11 881 231 159 50 chr20 31769246 31769532 -34898473 - L2 LINE L2 -73 3240 2987 2131 143 0 3 chr20 31769532 31769826 -34898179 + AluJb SINE Alu 1 293 -19 881 231 159 50 chr20 31769826 31770025 -34897980 - L2 LINE L2 -326 2987 2680 211 195 0 0 chr20 31770039 31770080 -34897925 + MIR SINE MIR 222 262 0 277 305 60 20 chr20 31770968 31771119 -34896886 + L2 LINE L2 2892 3048 -224 345 258 22 0 chr20 31771213 31771302 -34896703 - MER94 DNA DNA -42 92 2 2326 107 0 0 chr20 31771536 31771836 -34896169 + AluSx SINE Alu 1 300 -12 633 272 50 39 chr20 31771843 31772192 -34895813 - L2 LINE L2 -190 3123 2768 2090 102 0 46 chr20 31772192 31772496 -34895509 - AluSg SINE Alu -20 290 1 633 272 50 39 chr20 31772496 31772564 -34895441 - L2 LINE L2 -545 2768 2702 1948 111 52 17 chr20 31773151 31773439 -34894566 + AluJo SINE Alu 1 298 -14 827 123 0 0 chr20 31773445 31773559 -34894446 + FLAM_C SINE Alu 5 118 -15 201 159 0 0 chr20 31775966 31776010 -34891995 + CT-rich Low_complexity Low_complexity 1 44 0 29 84 0 0 chr20 31776247 31776318 -34891687 + GC_rich Low_complexity Low_complexity 1 71 0 389 286 66 98 chr20 31777969 31778378 -34889627 + MLT1K LTR MaLR 191 586 -2 238 227 27 13 chr20 31783820 31783895 -34884110 + L1ME LINE L1 5729 5804 -360 700 281 89 31 chr20 31783904 31784264 -34883741 + L1MC4a LINE L1 5644 6024 -1784 1772 185 14 0 chr20 31784439 31784731 -34883274 + AluJo SINE Alu 3 298 -14 475 266 101 6 chr20 31785426 31785595 -34882410 - MIR3 SINE MIR -17 191 7 1887 162 10 19 chr20 31785631 31785939 -34882066 + AluJo SINE Alu 1 305 -7 459 303 31 37 chr20 31786120 31786282 -34881723 + L2 LINE L2 3153 3313 0 2343 42 46 7 chr20 31786321 31786604 -34881401 - AluY SINE Alu -17 294 1 2160 121 7 10 chr20 31786674 31786972 -34881033 - AluSx SINE Alu -15 297 1 233 303 118 0 chr20 31787201 31787277 -34880728 + MIR3 SINE MIR 81 165 -43 1582 191 15 4 chr20 31787381 31787654 -34880351 + AluJo SINE Alu 1 276 -36 210 37 0 0 chr20 31787663 31787690 -34880315 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 280 146 0 21 chr20 31787743 31787791 -34880214 + Alu SINE Alu 1 47 -256 825 278 43 0 chr20 31788412 31788646 -34879359 + MIR SINE MIR 19 262 0 524 224 81 23 chr20 31791077 31791251 -34876754 + MIR SINE MIR 67 250 -12 425 254 90 8 chr20 31791732 31791866 -34876139 + MIR SINE MIR 117 261 -1 216 0 0 0 chr20 31792212 31792236 -34875769 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 22 35 0 0 chr20 31793904 31793933 -34874072 + GC_rich Low_complexity Low_complexity 1 29 0 360 263 11 0 chr20 31794290 31794385 -34873620 - MIR3 SINE MIR -25 183 88 226 234 78 0 chr20 31794403 31794467 -34873538 - L3 LINE CR1 -1202 375 307 * 665 228 21 99 chr20 31794465 31794613 -34873392 - L2 LINE L2 -1 3312 3187 1615 143 9 78 chr20 31794613 31794934 -34873071 + AluJo SINE Alu 1 299 -13 665 228 21 99 chr20 31794934 31795018 -34872987 - L2 LINE L2 -126 3187 3098 1068 268 99 15 chr20 31795106 31795595 -34872410 + L2 LINE L2 2776 3312 -1 528 270 0 22 chr20 31796477 31796614 -34871391 - MIR SINE MIR -113 149 16 193 195 134 61 chr20 31796675 31796757 -34871248 - MIR SINE MIR -99 163 76 195 191 214 24 chr20 31796850 31796934 -34871071 + L2 LINE L2 3214 3313 0 489 291 64 18 chr20 31797038 31797258 -34870747 + MIR SINE MIR 2 231 -31 2356 90 7 0 chr20 31797358 31797648 -34870357 - AluSc SINE Alu -17 292 1 358 293 149 5 chr20 31797729 31797944 -34870061 + L2 LINE L2 1787 2032 -1282 534 278 98 0 chr20 31798054 31798227 -34869778 + MIR SINE MIR 73 262 0 1828 164 27 0 chr20 31798348 31798640 -34869365 - AluJo SINE Alu -8 304 5 1867 183 3 3 chr20 31798648 31798960 -34869045 - AluSx SINE Alu 0 312 1 2199 130 0 3 chr20 31798964 31799264 -34868741 - AluSq SINE Alu -14 299 1 1954 97 23 0 chr20 31799306 31799564 -34868441 + AluSx SINE Alu 49 312 0 2372 82 3 3 chr20 31799569 31799863 -34868142 + AluSg SINE Alu 1 294 -16 561 302 77 60 chr20 31800152 31800211 -34867794 - L1ME LINE L1 -451 5670 5613 1990 164 0 0 chr20 31800211 31800503 -34867502 - AluJo SINE Alu -20 292 1 561 302 77 60 chr20 31800503 31800838 -34867167 - L1ME LINE L1 -508 5613 5271 2208 100 3 20 chr20 31800967 31801267 -34866738 - AluSx SINE Alu -17 295 1 305 321 61 66 chr20 31801598 31801834 -34866171 + MIR SINE MIR 2 236 -26 * 1049 232 8 24 chr20 31801832 31802082 -34865923 - MIR SINE MIR 0 262 17 531 299 40 0 chr20 31802210 31802387 -34865618 + MIR3 SINE MIR 2 185 -23 718 228 0 0 chr20 31803560 31803705 -34864300 + FRAM SINE Alu 17 161 -15 472 252 22 15 chr20 31803815 31803950 -34864055 - MIR SINE MIR -57 205 70 776 290 36 0 chr20 31803984 31804208 -34863797 - MIR SINE MIR 0 262 31 1759 175 7 7 chr20 31804226 31804517 -34863488 - AluJo SINE Alu -21 291 1 506 301 43 60 chr20 31804568 31804870 -34863135 + MARNA DNA Mariner 135 431 -155 260 309 0 0 chr20 31805112 31805180 -34862825 - L2 LINE L2 -5 3308 3241 363 273 50 92 chr20 31805266 31805526 -34862479 - L2 LINE L2 -222 3091 2843 362 213 74 66 chr20 31805534 31805587 -34862418 - MLT1H LTR MaLR -8 541 490 2410 45 45 3 chr20 31805587 31805875 -34862130 - AluY SINE Alu -11 300 1 362 213 74 66 chr20 31805875 31805943 -34862062 - MLT1H LTR MaLR -59 490 419 1042 142 23 73 chr20 31806048 31806308 -34861697 - L1MB4 LINE L1 -194 5986 5740 251 232 43 0 chr20 31806308 31806377 -34861628 - MLT1G3 LTR MaLR -109 458 387 614 176 8 40 chr20 31806379 31806504 -34861501 - FLAM_C SINE Alu -18 125 5 569 265 63 78 chr20 31806506 31806538 -34861467 - MLT1G3 LTR MaLR -164 388 357 2149 129 7 3 chr20 31806538 31806833 -34861172 + AluSx SINE Alu 1 296 -16 569 265 63 78 chr20 31806833 31807149 -34860856 - MLT1G3 LTR MaLR -195 357 76 305 237 65 0 chr20 31807375 31807468 -34860537 + MIR3 SINE MIR 64 162 -46 1626 172 10 20 chr20 31807508 31807804 -34860201 + AluJo SINE Alu 2 294 -18 1264 237 70 38 chr20 31807953 31808094 -34859911 - MLT1J LTR MaLR -7 504 369 2187 121 0 16 chr20 31808094 31808399 -34859606 + AluSx SINE Alu 1 300 -12 1264 237 70 38 chr20 31808399 31808654 -34859351 - MLT1J LTR MaLR -142 369 95 262 246 202 35 chr20 31809792 31809906 -34858099 - L2 LINE L2 -2 3270 3138 1228 224 21 0 chr20 31809907 31810148 -34857857 + MIR SINE MIR 3 248 -14 2428 93 0 0 chr20 31810188 31810490 -34857515 + AluSx SINE Alu 1 302 -10 276 302 39 28 chr20 31810821 31811000 -34857005 + L1ME LINE L1 5695 5875 -295 353 242 21 11 chr20 31811064 31811159 -34856846 - MIR SINE MIR -1 261 166 416 207 43 78 chr20 31811160 31811256 -34856749 + L1MA9 LINE L1 6179 6277 -14 2371 100 7 0 chr20 31811256 31811565 -34856440 - AluY SINE Alu 0 311 1 1758 167 7 17 chr20 31811568 31811867 -34856138 - AluJb SINE Alu -16 296 1 416 207 43 78 chr20 31811867 31811882 -34856123 + L1MA9 LINE L1 6279 6290 -1 465 272 116 0 chr20 31811900 31812047 -34855958 - MIR SINE MIR -86 176 13 212 0 36 0 chr20 31812181 31812209 -34855796 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 23 0 0 0 chr20 31812257 31812280 -34855725 + AT_rich Low_complexity Low_complexity 1 23 0 3289 179 79 14 chr20 31812315 31812514 -34855491 - L1MD2 LINE L1 -3 6356 6171 267 114 0 0 chr20 31812514 31812558 -34855447 + (TG)n Simple_repeat Simple_repeat 2 45 0 3289 179 79 14 chr20 31812558 31813120 -34854885 - L1MD2 LINE L1 -188 6171 5546 188 260 14 96 chr20 31813293 31813315 -34854690 - L2 LINE L2 0 3272 3250 1847 139 9 47 chr20 31813315 31813632 -34854373 + AluJb SINE Alu 1 305 -7 188 260 14 96 chr20 31813632 31813682 -34854323 - L2 LINE L2 -22 3250 3206 313 195 230 35 chr20 31813802 31813889 -34854116 + L2 LINE L2 3169 3272 0 273 213 88 110 chr20 31814740 31814876 -34853129 - MIR SINE MIR -107 155 23 870 318 97 8 chr20 31815290 31815777 -34852228 + L1 LINE L1 3634 4163 -1983 1813 167 0 23 chr20 31815857 31816156 -34851849 - AluJb SINE Alu -20 292 1 2516 70 0 0 chr20 31816184 31816483 -34851522 + AluY SINE Alu 1 299 -12 2365 101 0 0 chr20 31816491 31816789 -34851216 + AluSx SINE Alu 1 298 -14 316 158 105 0 chr20 31817556 31817613 -34850392 + L2 LINE L2 3245 3307 -6 852 231 156 0 chr20 31817644 31817869 -34850136 + MIR SINE MIR 2 261 -1 667 111 102 19 chr20 31818274 31818382 -34849623 + FLAM_C SINE Alu 2 118 -25 222 37 0 0 chr20 31818386 31818413 -34849592 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 442 246 39 46 chr20 31818425 31818555 -34849450 - MIR3 SINE MIR -5 203 75 412 344 58 51 chr20 31819123 31819864 -34848141 - L2 LINE L2 -1 3271 2463 1257 204 5 5 chr20 31819979 31820199 -34847806 + AluJb SINE Alu 1 220 -92 228 250 88 15 chr20 31820278 31820346 -34847659 - L2 LINE L2 -301 2971 2899 907 170 0 0 chr20 31822420 31822561 -34845444 - AluJb SINE Alu -16 296 156 249 273 154 9 chr20 31822647 31822757 -34845248 + MIR SINE MIR 79 204 -58 423 309 92 46 chr20 31822846 31823063 -34844942 - MIR SINE MIR -34 228 2 1092 235 121 72 chr20 31823261 31823984 -34844021 - L2 LINE L2 -2 3311 2533 481 249 130 132 chr20 31823987 31824189 -34843816 - L1ME4a LINE L1 -136 5985 5783 2131 101 10 34 chr20 31824189 31824486 -34843519 + AluSx SINE Alu 1 290 -22 481 249 130 132 chr20 31824486 31824653 -34843352 - L1ME4a LINE L1 -338 5783 5617 477 256 80 0 chr20 31824809 31824934 -34843071 - L2 LINE L2 -772 2542 2408 186 186 153 17 chr20 31824923 31824982 -34843023 + MIR SINE MIR 69 135 -73 * 480 213 90 19 chr20 31825009 31825164 -34842841 + MER5A DNA MER1_type 1 166 -23 684 203 123 12 chr20 31825179 31825342 -34842663 + MER5A DNA MER1_type 9 189 0 1947 152 3 13 chr20 31825596 31825899 -34842106 + AluJo SINE Alu 3 302 -10 204 338 15 0 chr20 31826041 31826109 -34841896 + GA-rich Low_complexity Low_complexity 1 69 0 593 241 111 41 chr20 31826726 31826915 -34841090 - MER113 DNA MER1_type? -108 413 191 1776 149 22 0 chr20 31826915 31827220 -34840785 - AluJb SINE Alu 0 311 1 593 241 111 41 chr20 31827220 31827344 -34840661 - MER113 DNA MER1_type? -330 191 77 1773 136 27 37 chr20 31827585 31827879 -34840126 + AluJo SINE Alu 1 291 -21 781 300 29 4 chr20 31827892 31828132 -34839873 - MIR SINE MIR -3 259 14 268 347 66 16 chr20 31828175 31828296 -34839709 + L2 LINE L2 3127 3253 -19 2333 83 10 13 chr20 31828300 31828436 -34839569 + AluSx SINE Alu 1 136 -176 2487 84 3 3 chr20 31828436 31828747 -34839258 + AluSp SINE Alu 1 311 -2 2333 83 10 13 chr20 31828747 31828911 -34839094 + AluSx SINE Alu 136 300 -12 216 0 0 0 chr20 31828913 31828937 -34839068 + (TA)n Simple_repeat Simple_repeat 2 25 0 973 129 0 0 chr20 31829574 31829706 -34838299 + AluSq/x SINE Alu 1 132 -181 407 297 62 55 chr20 31829743 31829880 -34838125 + MIR SINE MIR 5 146 -116 1672 186 0 17 chr20 31829880 31830176 -34837829 + AluJb SINE Alu 1 291 -21 407 297 62 55 chr20 31830176 31830294 -34837711 + MIR SINE MIR 146 262 0 209 151 0 0 chr20 31830883 31830923 -34837082 + MIR SINE MIR 115 153 -109 200 268 31 82 chr20 31830910 31831007 -34836998 - L2 LINE L2 -62 3251 3160 * 810 153 12 112 chr20 31831027 31831197 -34836808 + AluJb SINE Alu 14 166 -146 1036 185 0 6 chr20 31831205 31831383 -34836622 + AluJb SINE Alu 128 304 -8 2366 122 0 0 chr20 31831422 31831734 -34836271 - AluSx SINE Alu 0 312 1 2284 123 3 0 chr20 31831770 31832080 -34835925 + AluSx SINE Alu 1 311 -1 2312 97 3 7 chr20 31832082 31832382 -34835623 + AluSc SINE Alu 1 299 -10 956 172 32 0 chr20 31832382 31832539 -34835466 + AluJb SINE Alu 134 295 -17 736 230 143 0 chr20 31832539 31832735 -34835270 - L2 LINE L2 -162 3151 2928 748 122 0 46 chr20 31832851 31832982 -34835023 - AluSg/x SINE Alu 0 312 188 1644 202 4 0 chr20 31832986 31833258 -34834747 - AluJb SINE Alu -39 273 1 261 75 0 0 chr20 31833263 31833303 -34834702 + (TTTG)n Simple_repeat Simple_repeat 1 40 0 2269 70 4 4 chr20 31833304 31833577 -34834428 - AluSp SINE Alu -32 281 9 392 96 41 27 chr20 31833577 31833650 -34834355 - L2 LINE L2 -533 2781 2708 2352 84 0 3 chr20 31833652 31833951 -34834054 - AluY SINE Alu -13 298 1 2120 189 114 18 chr20 31833965 31834332 -34833673 - MLT1F LTR MaLR 0 542 211 1535 146 12 103 chr20 31834332 31834491 -34833514 - AluJb SINE Alu -20 292 120 2150 116 0 3 chr20 31834491 31834784 -34833221 - AluSc SINE Alu -17 292 1 1535 146 12 103 chr20 31834784 31834820 -34833185 - AluJb SINE Alu -192 120 82 2414 95 0 3 chr20 31834820 31835124 -34832881 + AluSx SINE Alu 1 303 -9 1535 146 12 103 chr20 31835124 31835248 -34832757 - AluJb SINE Alu -230 82 1 2120 189 114 18 chr20 31835248 31835373 -34832632 - MLT1F LTR MaLR -331 211 3 1501 206 45 64 chr20 31835377 31835612 -34832393 - L1ME1 LINE L1 -2 6164 5941 2267 113 3 0 chr20 31835612 31835913 -34832092 - AluSq SINE Alu -11 302 1 1501 206 45 64 chr20 31835913 31836149 -34831856 - L1ME1 LINE L1 -225 5941 5702 431 213 0 0 chr20 31836149 31836229 -34831776 - MLT1A1 LTR MaLR 0 365 286 2408 52 31 0 chr20 31836230 31836516 -34831489 - AluY SINE Alu -12 299 5 1931 123 39 3 chr20 31836545 31836830 -34831175 - AluSq SINE Alu -18 295 1 2326 112 0 31 chr20 31836843 31837164 -34830841 - AluSx SINE Alu 0 312 2 791 104 18 67 chr20 31837164 31837322 -34830683 - L1MB3 LINE L1 -40 6143 5994 1474 183 20 4 chr20 31837326 31837622 -34830383 - AluJo SINE Alu 0 330 31 259 298 21 0 chr20 31837647 31837741 -34830264 - L1ME LINE L1 -5927 143 48 258 318 12 0 chr20 31837749 31837834 -34830171 - L2 LINE L2 -608 2706 2621 211 343 46 19 chr20 31837825 31837933 -34830072 - L2 LINE L2 -213 3059 2949 * 2251 101 0 44 chr20 31837950 31838268 -34829737 - AluSx SINE Alu -8 304 1 1915 169 0 16 chr20 31838863 31839176 -34828829 - AluJb SINE Alu -4 308 1 2627 188 27 40 chr20 31839250 31839798 -34828207 - MLT1F LTR MaLR -1 541 1 2086 122 48 0 chr20 31839998 31840293 -34827712 + AluSq SINE Alu 1 309 -4 2280 109 0 0 chr20 31840362 31840666 -34827339 + AluY SINE Alu 1 304 -7 1934 166 14 0 chr20 31840677 31840972 -34827033 - AluJb SINE Alu -13 299 1 2244 101 7 0 chr20 31840981 31841268 -34826737 - AluSx SINE Alu -19 293 5 2192 210 107 20 chr20 31841346 31841889 -34826116 - MLT1G LTR MaLR 0 590 1 868 140 0 56 chr20 31841900 31842043 -34825962 - AluJo SINE Alu -177 135 1 2236 117 0 0 chr20 31842066 31842356 -34825649 + AluSx SINE Alu 1 290 -22 456 307 43 12 chr20 31842804 31842967 -34825038 - L3 LINE CR1 -14 1563 1396 2489 95 0 13 chr20 31843004 31843320 -34824685 + AluSx SINE Alu 1 312 0 762 249 30 63 chr20 31843322 31843540 -34824465 - MER102b DNA MER1_type -1100 328 104 1819 161 39 0 chr20 31843540 31843820 -34824185 - AluJb SINE Alu -20 292 2 762 249 30 63 chr20 31843820 31843849 -34824156 - MER102b DNA MER1_type -1324 104 76 2199 129 0 0 chr20 31843849 31844151 -34823854 - AluSg SINE Alu -8 302 1 762 249 30 63 chr20 31844151 31844235 -34823770 - MER102b DNA MER1_type -1352 76 7 381 252 205 16 chr20 31844242 31844369 -34823636 + MIR SINE MIR 14 164 -98 1123 161 101 35 chr20 31844412 31844611 -34823394 - AluJo SINE Alu -83 229 18 1412 160 0 0 chr20 31844611 31844823 -34823182 + AluSg/x SINE Alu 88 299 -13 1842 154 7 17 chr20 31844861 31845145 -34822860 + AluJo SINE Alu 1 283 -29 261 0 0 0 chr20 31845145 31845174 -34822831 + (CAAT)n Simple_repeat Simple_repeat 2 30 0 1842 154 7 17 chr20 31845174 31845188 -34822817 + AluJo SINE Alu 283 296 -16 2306 106 7 0 chr20 31845249 31845541 -34822464 - AluSx SINE Alu -17 295 2 2232 83 17 3 chr20 31845548 31845838 -34822167 - AluSg SINE Alu -16 294 1 2165 88 42 32 chr20 31845895 31846079 -34821926 - AluSx SINE Alu -1 311 121 2313 102 0 19 chr20 31846079 31846392 -34821613 - AluSg SINE Alu -3 307 1 2165 88 42 32 chr20 31846392 31846515 -34821490 - AluSx SINE Alu -191 121 1 486 204 215 29 chr20 31847169 31847278 -34820727 + MIR SINE MIR 48 135 -127 2358 77 3 0 chr20 31847278 31847624 -34820381 + AluSq SINE Alu 1 347 0 486 204 215 29 chr20 31847624 31847685 -34820320 + MIR SINE MIR 135 251 -11 1895 168 0 3 chr20 31848016 31848314 -34819691 + AluJb SINE Alu 5 301 -11 292 234 2 0 chr20 31848555 31848620 -34819385 - MIR SINE MIR -68 140 84 2278 129 0 0 chr20 31848976 31849286 -34818719 + AluSx SINE Alu 1 310 -2 318 298 49 24 chr20 31849304 31849509 -34818496 - L1ME4a LINE L1 -2 6119 5910 828 236 112 83 chr20 31849530 31849597 -34818408 + MLT1L LTR MaLR 1 65 -550 1885 162 7 0 chr20 31849597 31849887 -34818118 - AluJo SINE Alu -19 293 2 828 236 112 83 chr20 31849887 31850020 -34817985 + MLT1L LTR MaLR 65 193 -422 1029 175 0 87 chr20 31850020 31850154 -34817851 - MER3 DNA MER1_type 0 209 102 2293 117 7 0 chr20 31850154 31850463 -34817542 + AluSq SINE Alu 1 311 -2 1029 175 0 87 chr20 31850463 31850557 -34817448 - MER3 DNA MER1_type -107 102 1 828 236 112 83 chr20 31850557 31850791 -34817214 + MLT1L LTR MaLR 193 449 -166 2274 119 6 3 chr20 31850802 31851113 -34816892 - AluSq SINE Alu -1 312 1 1781 134 72 14 chr20 31851139 31851429 -34816576 + AluJb SINE Alu 1 307 -5 4183 150 49 46 chr20 31851429 31851704 -34816301 - L1MB3 LINE L1 -9 6174 5901 381 43 0 0 chr20 31851714 31851761 -34816244 + (TA)n Simple_repeat Simple_repeat 2 48 0 2331 110 0 0 chr20 31851761 31852058 -34815947 - AluSg SINE Alu -10 300 1 2291 109 0 0 chr20 31852058 31852350 -34815655 - AluSx SINE Alu -19 293 1 4183 150 49 46 chr20 31852350 31852845 -34815160 - L1MB3 LINE L1 -282 5901 5409 2259 107 3 0 chr20 31852845 31853145 -34814860 - AluSq SINE Alu -12 301 1 4183 150 49 46 chr20 31853145 31853204 -34814801 - L1MB3 LINE L1 -774 5409 5352 1234 199 123 25 chr20 31853204 31853480 -34814525 - AluJb SINE Alu -9 303 1 4183 150 49 46 chr20 31853480 31853532 -34814473 - L1MB3 LINE L1 -831 5352 5302 1859 112 79 4 chr20 31853532 31853809 -34814196 - AluSq SINE Alu -15 298 1 4183 150 49 46 chr20 31853809 31853906 -34814099 - L1MB3 LINE L1 -881 5302 5182 417 39 0 0 chr20 31854039 31854090 -34813915 + (TTCC)n Simple_repeat Simple_repeat 4 54 0 189 107 0 0 chr20 31854088 31854116 -34813889 + (TC)n Simple_repeat Simple_repeat 2 29 0 * 2303 120 0 0 chr20 31854116 31854425 -34813580 - AluSc SINE Alu 0 309 1 451 292 92 5 chr20 31854427 31854622 -34813383 - L1ME4a LINE L1 -293 5828 5617 2496 72 0 3 chr20 31854641 31854948 -34813057 - AluY SINE Alu -5 306 1 1944 162 3 7 chr20 31855036 31855344 -34812661 - AluJo SINE Alu -5 307 1 1698 190 3 13 chr20 31855401 31855562 -34812443 - AluJo SINE Alu -12 300 142 2345 106 0 3 chr20 31855562 31855863 -34812142 - AluY SINE Alu -11 300 1 1698 190 3 13 chr20 31855863 31856001 -34812004 - AluJo SINE Alu -170 142 4 202 303 30 15 chr20 31856030 31856096 -34811909 - L2 LINE L2 -30 3242 3176 2197 105 0 38 chr20 31856179 31856492 -34811513 + AluSx SINE Alu 1 301 -11 328 218 99 35 chr20 31856545 31856698 -34811307 - MIR SINE MIR -50 212 38 613 289 47 30 chr20 31857087 31857135 -34810870 - MIR SINE MIR -4 258 212 1979 162 30 0 chr20 31857135 31857438 -34810567 - AluJb SINE Alu 0 312 1 613 289 47 30 chr20 31857438 31857621 -34810384 - MIR SINE MIR -50 212 23 1263 161 15 0 chr20 31857643 31857848 -34810157 - MER3 DNA MER1_type -1 208 1 329 269 19 113 chr20 31858350 31858510 -34809495 + LTR67 LTR ERVL 26 170 -387 192 185 0 185 chr20 31858537 31858656 -34809349 - L2 LINE L2 -2786 528 432 291 207 49 12 chr20 31858700 31858782 -34809223 + LTR67 LTR ERVL 448 532 -25 654 212 9 0 chr20 31859231 31859344 -34808661 + MER81 DNA DNA 1 114 0 2169 120 0 17 chr20 31859459 31859759 -34808246 + AluSx SINE Alu 1 295 -17 374 189 8 71 chr20 31859759 31859886 -34808119 - L1ME4a LINE L1 -2376 5432 5314 1150 94 33 0 chr20 31859896 31860077 -34807928 - L1MA4A LINE L1 -16 6287 6101 409 256 55 75 chr20 31860086 31860285 -34807720 + HAL1 LINE L1 2 196 -2311 2181 232 76 72 chr20 31860356 31860533 -34807472 + HAL1 LINE L1 1100 1275 -1232 1647 178 53 0 chr20 31860533 31860814 -34807191 + AluJo SINE Alu 1 296 -16 2181 232 76 72 chr20 31860814 31861123 -34806882 + HAL1 LINE L1 1275 1581 -926 2225 113 0 19 chr20 31861123 31861433 -34806572 - AluSx SINE Alu -8 304 1 2181 232 76 72 chr20 31861433 31861757 -34806248 + HAL1 LINE L1 1581 1918 -589 2081 139 0 13 chr20 31861757 31862074 -34805931 - AluSq SINE Alu 0 313 1 2181 232 76 72 chr20 31862074 31862225 -34805780 + HAL1 LINE L1 1918 2067 -440 24 0 0 0 chr20 31862255 31862279 -34805726 + AT_rich Low_complexity Low_complexity 1 24 0 656 223 130 16 chr20 31862291 31862475 -34805530 - MLT1J2 LTR MaLR -245 205 1 340 239 54 54 chr20 31862521 31862651 -34805354 - L2 LINE L2 0 3313 3184 279 231 79 139 chr20 31862740 31862817 -34805188 - L2 LINE L2 -527 2787 2707 279 0 0 0 chr20 31862817 31862848 -34805157 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 279 231 79 139 chr20 31862848 31862861 -34805144 - L2 LINE L2 -607 2707 2695 2202 71 7 7 chr20 31862861 31863144 -34804861 - AluSx SINE Alu -29 283 1 279 231 79 139 chr20 31863144 31863268 -34804737 - L2 LINE L2 -619 2695 2585 381 22 0 0 chr20 31863777 31863823 -34804182 + (CCG)n Simple_repeat Simple_repeat 2 47 0 284 275 28 9 chr20 31864125 31864234 -34803771 + MIR SINE MIR 35 145 -117 399 261 223 0 chr20 31864337 31864521 -34803484 + MIR SINE MIR 20 244 -18 330 251 0 45 chr20 31864865 31864995 -34803010 - MIR SINE MIR -50 212 91 2242 113 3 0 chr20 31865000 31865301 -34802704 - AluSx SINE Alu -10 302 1 2380 81 7 0 chr20 31865546 31865842 -34802163 - AluSp SINE Alu -15 298 1 263 250 26 0 chr20 31865868 31865944 -34802061 + MIR3 SINE MIR 109 186 -22 350 234 70 65 chr20 31865954 31866090 -34801915 + MIR SINE MIR 14 156 -52 347 173 0 150 chr20 31866137 31866270 -34801735 + MIR SINE MIR 106 218 -44 2535 68 0 3 chr20 31866513 31866823 -34801182 + AluY SINE Alu 3 311 0 202 311 95 37 chr20 31867237 31867427 -34800578 - MIR SINE MIR -54 208 8 1204 263 137 34 chr20 31867438 31867613 -34800392 - L2 LINE L2 -4 3309 3154 1478 130 0 14 chr20 31867613 31867828 -34800177 + AluSg/x SINE Alu 101 312 0 1204 263 137 34 chr20 31867828 31868500 -34799505 - L2 LINE L2 -159 3154 2345 29 0 0 0 chr20 31869096 31869125 -34798880 + AT_rich Low_complexity Low_complexity 1 29 0 1263 174 38 77 chr20 31869127 31869302 -34798703 - AluJo SINE Alu -25 287 107 2464 78 0 0 chr20 31869302 31869596 -34798409 + AluSg SINE Alu 1 294 -16 2198 133 0 0 chr20 31869606 31869900 -34798105 + AluSx SINE Alu 1 294 -18 1263 174 38 77 chr20 31869900 31870000 -34798005 - AluJo SINE Alu -214 98 12 1794 131 6 89 chr20 31870003 31870317 -34797688 - AluJo SINE Alu -24 288 1 197 277 0 0 chr20 31870412 31870459 -34797546 - MIR SINE MIR -111 151 105 218 261 31 0 chr20 31870519 31870584 -34797421 + MER5A DNA MER1_type 9 75 -114 763 166 0 43 chr20 31870585 31870724 -34797281 + FLAM_C SINE Alu 1 133 0 351 200 150 58 chr20 31870909 31871029 -34796976 - MIR SINE MIR -35 227 97 349 235 72 78 chr20 31871630 31871796 -34796209 + MIR3 SINE MIR 22 186 -22 350 230 71 8 chr20 31872653 31872779 -34795226 - L1ME4a LINE L1 -2 6119 5986 291 276 8 90 chr20 31872839 31872973 -34795032 - L1ME4a LINE L1 -359 5762 5640 942 140 0 0 chr20 31873254 31873390 -34794615 - FLAM_C SINE Alu -3 140 5 1738 195 3 0 chr20 31873396 31873694 -34794311 - AluJo SINE Alu -8 304 6 2435 97 0 0 chr20 31873951 31874259 -34793746 - AluSg SINE Alu -2 308 1 1776 163 24 17 chr20 31874285 31874580 -34793425 + AluJo SINE Alu 1 297 -15 322 69 414 0 chr20 31874800 31874858 -34793147 - AluSc SINE Alu -25 274 193 1536 218 63 32 chr20 31875125 31875276 -34792729 - MER113 DNA MER1_type? -27 494 349 2242 105 14 0 chr20 31875276 31875570 -34792435 - AluSg1 SINE Alu -11 298 1 1536 218 63 32 chr20 31875570 31875859 -34792146 - MER113 DNA MER1_type? -172 349 40 270 235 92 42 chr20 31875907 31876026 -34791979 + MIR SINE MIR 20 144 -118 361 267 24 79 chr20 31876072 31876191 -34791814 - MIR SINE MIR -71 191 82 1975 105 52 3 chr20 31876191 31876477 -34791528 + AluSx SINE Alu 1 300 -12 361 267 24 79 chr20 31876477 31876522 -34791483 - MIR SINE MIR -180 82 36 2645 119 36 43 chr20 31876587 31876667 -34791338 + L1MB2 LINE L1 5706 5785 -386 2015 140 7 26 chr20 31876667 31876974 -34791031 + AluJo SINE Alu 1 301 -11 2645 119 36 43 chr20 31876974 31877362 -34790643 + L1MB2 LINE L1 5785 6171 0 609 221 118 79 chr20 31877394 31877696 -34790309 - L1MC5 LINE L1 -32 7929 7640 2329 104 0 3 chr20 31877696 31877995 -34790010 - AluSx SINE Alu -14 298 1 1686 152 0 81 chr20 31877998 31878308 -34789697 - AluJo SINE Alu -17 295 11 609 221 118 79 chr20 31878308 31878367 -34789638 - L1MC5 LINE L1 -322 7639 7550 585 164 0 49 chr20 31878413 31878535 -34789470 + AluJo SINE Alu 22 137 -175 1657 143 3 72 chr20 31878536 31878843 -34789162 + AluJb SINE Alu 3 288 -24 373 305 26 13 chr20 31878890 31879041 -34788964 + L1MC/D LINE L1 5621 5773 -2035 1851 162 16 7 chr20 31879051 31879330 -34788675 + AluSx SINE Alu 1 285 -27 228 67 0 0 chr20 31879330 31879360 -34788645 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 1851 162 16 7 chr20 31879360 31879389 -34788616 + AluSx SINE Alu 285 312 0 1467 182 19 56 chr20 31879394 31879718 -34788287 + AluJb SINE Alu 1 312 0 453 319 48 5 chr20 31879973 31880161 -34787844 + MIR SINE MIR 26 221 -41 506 322 64 26 chr20 31880618 31880851 -34787154 - MIR SINE MIR -4 258 17 686 279 71 20 chr20 31880917 31881268 -34786737 - L1MC4a LINE L1 -1893 5915 5547 2456 71 0 3 chr20 31881374 31881671 -34786334 - AluY SINE Alu -15 296 1 2296 101 0 13 chr20 31881933 31882241 -34785764 - AluSc SINE Alu -5 304 1 1747 129 19 0 chr20 31882433 31882689 -34785316 + AluSx SINE Alu 35 295 -17 346 271 132 14 chr20 31883417 31883561 -34784444 - L1ME4a LINE L1 -2 6119 5959 240 329 0 0 chr20 31883714 31883784 -34784221 - Charlie8 DNA MER1_type -4 2413 2344 2189 101 14 10 chr20 31883904 31884201 -34783804 + AluSp SINE Alu 1 298 -15 1706 163 30 3 chr20 31884234 31884529 -34783476 + AluSx SINE Alu 1 303 -9 261 83 0 0 chr20 31884734 31884770 -34783235 + (TCCCC)n Simple_repeat Simple_repeat 1 36 0 1153 210 90 22 chr20 31884770 31885037 -34782968 - AluJo SINE Alu -13 289 5 942 229 22 18 chr20 31885189 31885412 -34782593 - MER58A DNA MER1_type 0 224 1 225 0 0 0 chr20 31885458 31885483 -34782522 + (TA)n Simple_repeat Simple_repeat 2 26 0 2037 137 3 7 chr20 31885483 31885790 -34782215 - AluSx SINE Alu -6 306 1 406 234 10 112 chr20 31885796 31885866 -34782139 - L1ME4a LINE L1 -364 5798 5722 1608 178 49 0 chr20 31885866 31886153 -34781852 - AluJo SINE Alu -11 301 1 405 0 0 0 chr20 31886153 31886198 -34781807 + (TTTTG)n Simple_repeat Simple_repeat 3 47 0 1545 152 7 79 chr20 31886200 31886364 -34781641 - AluJo SINE Alu -31 281 147 2125 90 7 14 chr20 31886364 31886654 -34781351 - AluY SINE Alu -20 291 4 1545 152 7 79 chr20 31886654 31886792 -34781213 - AluJo SINE Alu -165 147 1 406 234 10 112 chr20 31886792 31886914 -34781091 - L1ME4a LINE L1 -440 5722 5622 288 0 0 0 chr20 31886918 31886950 -34781055 + (TTG)n Simple_repeat Simple_repeat 2 33 0 974 175 18 6 chr20 31886985 31887156 -34780849 - AluJo SINE Alu -53 259 87 2064 97 90 0 chr20 31887164 31887443 -34780562 - AluSx SINE Alu -8 304 1 2122 123 3 0 chr20 31887448 31887755 -34780250 - AluSq SINE Alu 0 308 1 1270 73 141 29 chr20 31888986 31889192 -34778813 - MER30 DNA MER1_type -1 229 1 2169 107 7 0 chr20 31889365 31889654 -34778351 + AluSx SINE Alu 5 295 -17 2147 117 43 0 chr20 31889664 31889963 -34778042 + AluSq SINE Alu 1 312 -1 443 226 96 41 chr20 31890472 31890678 -34777327 + L1MC/D LINE L1 5583 5814 -307 261 0 0 0 chr20 31890874 31890903 -34777102 + (GA)n Simple_repeat Simple_repeat 2 30 0 2244 96 0 34 chr20 31890937 31891259 -34776746 + AluSx SINE Alu 1 311 -1 1047 161 0 12 chr20 31891291 31891452 -34776553 + AluJb SINE Alu 134 292 -20 2052 103 32 32 chr20 31891649 31891960 -34776045 - AluSx SINE Alu -1 311 1 1217 117 0 0 chr20 31892024 31892186 -34775819 + AluSq SINE Alu 143 304 -9 2267 95 0 10 chr20 31892192 31892487 -34775518 + AluSc SINE Alu 2 293 -16 2434 87 0 16 chr20 31892660 31892971 -34775034 - AluSc SINE Alu -3 306 1 1429 143 22 0 chr20 31893127 31893357 -34774648 - L1MC1 LINE L1 0 6333 6099 964 258 120 9 chr20 31893376 31893702 -34774303 - L1MC1 LINE L1 -1898 5910 5549 1945 103 46 0 chr20 31893765 31894027 -34773978 + AluY SINE Alu 38 311 0 2034 116 0 14 chr20 31894041 31894326 -34773679 + AluY SINE Alu 11 291 -20 1437 149 8 59 chr20 31894326 31894469 -34773536 - AluJo SINE Alu -36 276 127 1955 147 0 28 chr20 31894469 31894789 -34773216 - AluSx SINE Alu -1 311 1 2395 73 33 0 chr20 31894793 31895093 -34772912 - AluY SINE Alu -1 310 1 1591 195 0 51 chr20 31895098 31895411 -34772594 - AluJb SINE Alu -15 297 1 1437 149 8 59 chr20 31895411 31895511 -34772494 - AluJo SINE Alu -192 120 35 225 178 0 0 chr20 31897034 31897079 -34770926 + GA-rich Low_complexity Low_complexity 1 45 0 2721 7 0 7 chr20 31897514 31897809 -34770196 + AluYa5 SINE Alu 19 311 0 2371 98 0 0 chr20 31897875 31898181 -34769824 - AluSq SINE Alu -7 306 1 1916 139 40 7 chr20 31898181 31898483 -34769522 - AluJb SINE Alu 0 312 1 807 277 203 5 chr20 31898635 31899079 -34768926 - L1ME3A LINE L1 -232 5938 5407 294 195 13 39 chr20 31899080 31899157 -34768848 - L1ME1 LINE L1 -107 6059 5985 1840 155 7 7 chr20 31899780 31900082 -34767923 - AluJb SINE Alu 0 306 5 2368 101 0 0 chr20 31900336 31900634 -34767371 + AluSx SINE Alu 1 298 -14 250 149 43 0 chr20 31900680 31900727 -34767278 - MIR3 SINE MIR -48 160 112 1624 177 7 39 chr20 31901503 31901808 -34766197 + AluJo SINE Alu 1 295 -17 2092 119 31 3 chr20 31903032 31903326 -34764679 + AluSx SINE Alu 1 302 -10 215 261 120 0 chr20 31903385 31903477 -34764528 + MIR3 SINE MIR 91 193 -15 228 261 203 0 chr20 31903565 31903703 -34764302 - L1MC5 LINE L1 -77 7884 7719 1898 177 0 10 chr20 31903720 31904019 -34763986 - AluJo SINE Alu -16 296 1 4219 158 18 72 chr20 31904029 31904101 -34763904 - L1MB8 LINE L1 -1 6177 6103 2306 93 3 10 chr20 31904101 31904402 -34763603 + AluSx SINE Alu 3 301 -11 4219 158 18 72 chr20 31904402 31905038 -34762967 - L1MB8 LINE L1 -75 6103 5527 1931 163 7 0 chr20 31905038 31905339 -34762666 - AluJb SINE Alu -9 303 1 4219 158 18 72 chr20 31905339 31905552 -34762453 - L1MB8 LINE L1 -651 5527 5304 276 174 0 35 chr20 31905553 31905639 -34762366 + (TA)n Simple_repeat Simple_repeat 1 83 0 2283 120 0 0 chr20 31905655 31905964 -34762041 - AluSx SINE Alu -3 309 1 2269 107 0 0 chr20 31905983 31906273 -34761732 - AluSx SINE Alu -22 290 1 431 289 10 30 chr20 31906273 31906474 -34761531 - L1MB8 LINE L1 -857 5289 5093 285 122 22 133 chr20 31906466 31906556 -34761449 - L1MB5 LINE L1 -215 5959 5880 * 237 65 0 0 chr20 31906560 31906591 -34761414 + (TG)n Simple_repeat Simple_repeat 2 32 0 987 206 23 19 chr20 31906599 31906813 -34761192 - AluJo SINE Alu -14 298 84 1226 144 14 9 chr20 31906813 31907035 -34760970 - L1MB5 LINE L1 -314 5870 5648 * 1850 183 27 29 chr20 31907024 31907226 -34760779 - L1MB8 LINE L1 -1088 5058 4857 2352 100 3 0 chr20 31907226 31907525 -34760480 + AluSx SINE Alu 1 300 -12 1850 183 27 29 chr20 31907525 31907731 -34760274 - L1MB8 LINE L1 -1289 4857 4651 933 185 0 6 chr20 31907732 31907889 -34760116 + Tigger1 DNA MER2_type 1 156 -2262 * 1275 121 48 5 chr20 31907879 31908086 -34759919 + Tigger1 DNA MER2_type 2202 2417 -1 1423 196 28 3 chr20 31908087 31908404 -34759601 - L1MB8 LINE L1 -1495 4651 4327 2338 86 3 0 chr20 31908405 31908696 -34759309 + AluSx SINE Alu 1 292 -20 972 105 0 0 chr20 31908699 31908911 -34759094 + (TA)n Simple_repeat Simple_repeat 1 212 0 933 138 0 3 chr20 31908923 31909283 -34758722 + (TA)n Simple_repeat Simple_repeat 1 360 0 1227 124 0 21 chr20 31909470 31909663 -34758342 - AluSc SINE Alu -3 306 118 2251 94 7 3 chr20 31909675 31909962 -34758043 + AluSq SINE Alu 1 288 -25 1129 157 0 0 chr20 31910039 31910211 -34757794 + FRAM SINE Alu 1 170 -6 523 144 122 0 chr20 31910315 31910405 -34757600 - MER5B DNA MER1_type -4 174 74 927 203 39 0 chr20 31910405 31910587 -34757418 - MER5A DNA MER1_type 0 189 1 297 286 13 0 chr20 31910587 31910661 -34757344 - MER5B DNA MER1_type -97 81 7 299 123 0 53 chr20 31910679 31910736 -34757269 - L1MC5 LINE L1 -737 7224 7171 1849 151 0 7 chr20 31910825 31911117 -34756888 + AluSx SINE Alu 1 290 -22 361 217 35 61 chr20 31911162 31911259 -34756746 + L1ME4a LINE L1 5954 6049 -72 1967 146 0 3 chr20 31911259 31911568 -34756437 - AluSx SINE Alu -4 308 1 361 217 35 61 chr20 31911568 31911585 -34756420 + L1ME4a LINE L1 6049 6065 -56 2158 119 6 0 chr20 31911734 31912045 -34755960 - AluSq SINE Alu 0 313 1 184 317 17 0 chr20 31912684 31912744 -34755261 + L2 LINE L2 3200 3260 -12 1756 176 0 3 chr20 31913896 31914208 -34753797 + AluJb SINE Alu 1 311 -1 2181 105 0 6 chr20 31914220 31914534 -34753471 + AluSx SINE Alu 1 312 0 1225 70 0 41 chr20 31914534 31914705 -34753300 + AluSg/x SINE Alu 131 294 -16 29 0 0 0 chr20 31914967 31914996 -34753009 + AT_rich Low_complexity Low_complexity 1 29 0 1931 138 0 0 chr20 31914996 31915286 -34752719 - AluSx SINE Alu -22 290 1 1092 47 0 0 chr20 31915286 31915415 -34752590 - AluSq/x SINE Alu -177 135 7 818 179 0 0 chr20 31915420 31915565 -34752440 - FRAM SINE Alu -4 172 28 194 282 0 0 chr20 31915578 31915617 -34752388 - L2 LINE L2 -24 3248 3210 227 273 78 7 chr20 31915750 31915904 -34752101 + L1ME4a LINE L1 5954 6118 -3 600 344 12 23 chr20 31916640 31916896 -34751109 - MIR SINE MIR -3 259 7 222 286 0 16 chr20 31917682 31917745 -34750260 + CT-rich Low_complexity Low_complexity 2 63 0 2200 117 0 0 chr20 31919429 31919737 -34748268 + AluSx SINE Alu 1 308 -4 1846 116 29 0 chr20 31921235 31921543 -34746462 + AluSx SINE Alu 1 316 0 1112 161 75 0 chr20 31921732 31921931 -34746074 - AluJb SINE Alu -17 295 82 622 306 68 15 chr20 31922075 31922318 -34745687 + MIR SINE MIR 8 259 -3 557 284 52 84 chr20 31922439 31922627 -34745378 - L2 LINE L2 -16 3297 3126 1624 165 10 20 chr20 31922627 31922924 -34745081 - AluJb SINE Alu -8 304 11 557 284 52 84 chr20 31922924 31923116 -34744889 - L2 LINE L2 -187 3126 2929 2217 87 3 26 chr20 31923490 31923802 -34744203 + AluSp SINE Alu 2 306 -7 214 291 36 0 chr20 31924300 31924355 -34743650 - L2 LINE L2 -13 3259 3203 529 269 18 58 chr20 31924450 31924673 -34743332 + L2 LINE L2 2837 3050 -222 1423 101 43 5 chr20 31924699 31924908 -34743097 - AluY SINE Alu -94 217 1 844 208 0 0 chr20 31924912 31925061 -34742944 + AluJo SINE Alu 120 268 -44 199 333 167 24 chr20 31925611 31925779 -34742226 - L2 LINE L2 -5 3267 3076 740 251 125 99 chr20 31925873 31926224 -34741781 - L2 LINE L2 0 3313 2973 2210 111 0 0 chr20 31926224 31926522 -34741483 + AluSx SINE Alu 1 298 -14 740 251 125 99 chr20 31926522 31926969 -34741036 - L2 LINE L2 -340 2973 2432 2076 91 0 0 chr20 31926993 31927256 -34740749 - AluSg SINE Alu -47 263 1 686 146 42 130 chr20 31927299 31927318 -34740687 - L1MB8 LINE L1 -7 6171 6152 2223 148 9 0 chr20 31927318 31927663 -34740342 - MER7A DNA MER2_type 0 346 1 686 146 42 130 chr20 31927663 31927763 -34740242 - L1MB8 LINE L1 -26 6152 6045 2161 103 3 0 chr20 31927763 31928063 -34739942 - AluSx SINE Alu -11 301 1 686 146 42 130 chr20 31928063 31928090 -34739915 - L1MB8 LINE L1 -133 6045 6017 1979 139 0 3 chr20 31928090 31928391 -34739614 + AluSx SINE Alu 1 300 -12 686 146 42 130 chr20 31928391 31928481 -34739524 - L1MB8 LINE L1 -161 6017 5954 329 313 15 37 chr20 31928699 31928833 -34739172 + MIR SINE MIR 14 144 -118 643 156 9 9 chr20 31928846 31928955 -34739050 - Tigger3(Golem) DNA MER2_type -1 3028 2920 271 50 0 0 chr20 31928984 31929024 -34738981 - AluJo SINE Alu -1 301 262 916 146 0 13 chr20 31929025 31929183 -34738822 - AluJo SINE Alu -102 210 55 1630 164 49 23 chr20 31929305 31929609 -34738396 - AluJo SINE Alu 0 312 1 477 171 40 0 chr20 31929625 31929701 -34738304 - Tigger3(Golem) DNA MER2_type -2949 80 2 226 284 30 15 chr20 31929719 31929786 -34738219 + MIR SINE MIR 189 256 -6 391 295 32 0 chr20 31929891 31930022 -34737983 + MIR SINE MIR 35 166 -54 1407 150 6 73 chr20 31930022 31930119 -34737886 + AluJo SINE Alu 1 103 -209 2337 45 25 0 chr20 31930119 31930430 -34737575 + AluY SINE Alu 1 318 0 1407 150 6 73 chr20 31930430 31930644 -34737361 + AluJo SINE Alu 103 292 -20 290 237 212 42 chr20 31930674 31930792 -34737213 - L2 LINE L2 -8 3305 3168 186 188 59 129 chr20 31930809 31930894 -34737111 + MIR SINE MIR 183 261 -1 246 322 11 0 chr20 31931080 31931167 -34736838 - L2 LINE L2 -1 3271 3184 205 254 225 0 chr20 31931636 31931707 -34736298 + MIR SINE MIR 160 246 -16 361 217 66 47 chr20 31931815 31931921 -34736084 + MIR SINE MIR 93 200 -62 1015 170 0 75 chr20 31931995 31932206 -34735799 - AluJb SINE Alu -6 306 114 2150 100 7 0 chr20 31932206 31932497 -34735508 + AluSg SINE Alu 5 297 -13 1015 170 0 75 chr20 31932497 31932526 -34735479 - AluJb SINE Alu -198 114 84 264 252 76 23 chr20 31932534 31932665 -34735340 - L1ME4a LINE L1 -6 6115 5978 326 312 60 38 chr20 31932690 31933007 -34734998 - L1MC4a LINE L1 -1897 5911 5588 2151 82 38 0 chr20 31933008 31933299 -34734706 - AluSp SINE Alu -11 302 1 852 107 0 16 chr20 31933316 31933437 -34734568 - FLAM_C SINE Alu -16 127 9 660 269 74 37 chr20 31933497 31933765 -34734240 - L1MC4a LINE L1 -736 5561 5329 2302 96 0 0 chr20 31933765 31934077 -34733928 - AluSx SINE Alu 0 312 1 660 269 74 37 chr20 31934077 31934095 -34733910 - L1MC4a LINE L1 -968 5329 5313 587 359 51 8 chr20 31934180 31934534 -34733471 - L1MC4a LINE L1 -1099 5047 4679 1043 285 0 8 chr20 31934534 31934797 -34733208 + MIR SINE MIR 2 262 0 477 351 71 4 chr20 31934821 31935089 -34732916 - L1MC4a LINE L1 -1487 4659 4374 2088 110 3 0 chr20 31935090 31935380 -34732625 - AluSx SINE Alu -21 291 1 1520 206 3 3 chr20 31935485 31935772 -34732233 - AluJo SINE Alu -25 287 1 846 165 0 0 chr20 31935795 31936017 -34731988 - FLAM_C SINE Alu 0 222 1 234 158 92 79 chr20 31936254 31936330 -34731675 + L2 LINE L2 3173 3249 -23 195 247 91 39 chr20 31936697 31936774 -34731231 - L2 LINE L2 -4 3268 3188 372 178 0 0 chr20 31937294 31937367 -34730638 + LTR30 LTR ERV1 552 624 -98 217 438 0 0 chr20 31937482 31937603 -34730402 + MIR SINE MIR 2 122 -140 399 152 0 0 chr20 31937740 31937806 -34730199 - MLT1F LTR MaLR -2 540 475 2045 129 0 3 chr20 31937807 31938116 -34729889 + AluSg SINE Alu 1 308 -2 996 217 104 3 chr20 31938129 31938528 -34729477 - MLT1F LTR MaLR -24 569 1 269 325 49 12 chr20 31938872 31939035 -34728970 + L3b LINE CR1 1292 1460 -123 27 0 0 0 chr20 31939134 31939161 -34728844 + AT_rich Low_complexity Low_complexity 1 27 0 344 206 152 0 chr20 31939203 31939295 -34728710 - L1ME4a LINE L1 0 6121 6016 1739 151 32 3 chr20 31939365 31939649 -34728356 + AluSx SINE Alu 1 292 -20 1705 132 0 51 chr20 31939662 31939957 -34728048 + AluJo SINE Alu 13 292 -20 853 219 12 0 chr20 31940019 31940179 -34727826 + FRAM SINE Alu 1 162 -4 1021 132 0 0 chr20 31940336 31940480 -34727525 - FRAM SINE Alu -33 143 1 383 197 99 0 chr20 31940651 31940722 -34727283 - L2 LINE L2 -2 3270 3193 240 250 62 0 chr20 31940868 31940932 -34727073 + MIR SINE MIR 87 154 -108 525 272 112 19 chr20 31941056 31941262 -34726743 - MIR SINE MIR -13 249 25 2011 210 64 67 chr20 31941817 31942361 -34725644 - MLT1E2 LTR MaLR 0 626 82 1953 96 0 0 chr20 31942361 31942645 -34725360 + AluSx SINE Alu 25 308 0 2011 210 64 67 chr20 31942645 31942727 -34725278 - MLT1E2 LTR MaLR -544 82 1 283 296 56 0 chr20 31943274 31943382 -34724623 - MIR SINE MIR -82 180 67 217 298 0 0 chr20 31943374 31943421 -34724584 - MIR SINE MIR 0 262 216 * 310 262 146 10 chr20 31943528 31943631 -34724374 - MIR SINE MIR -125 137 21 212 273 11 11 chr20 31944648 31944736 -34723269 + C-rich Low_complexity Low_complexity 6 93 0 195 133 33 17 chr20 31944737 31944797 -34723208 + (CCG)n Simple_repeat Simple_repeat 2 62 0 21 0 0 0 chr20 31945118 31945139 -34722866 + GC_rich Low_complexity Low_complexity 1 21 0 485 286 28 22 chr20 31945458 31945640 -34722365 - MER5A DNA MER1_type 0 189 7 182 37 37 0 chr20 31946949 31946976 -34721029 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1137 81 7 0 chr20 31946976 31947125 -34720880 - AluSp SINE Alu -163 150 1 1162 172 44 24 chr20 31947180 31947430 -34720575 + AluJo SINE Alu 36 290 -22 2117 108 13 0 chr20 31947436 31947742 -34720263 + AluSg SINE Alu 1 310 0 2181 83 17 10 chr20 31947862 31948164 -34719841 + AluSx SINE Alu 1 304 -8 2382 60 0 13 chr20 31948433 31948748 -34719257 + AluY SINE Alu 1 311 0 249 195 169 0 chr20 31949628 31949705 -34718300 - MER94 DNA DNA -35 99 10 438 218 0 45 chr20 31949719 31949829 -34718176 - L2 LINE L2 -181 3091 2987 279 235 169 7 chr20 31950032 31950168 -34717837 - MIR SINE MIR -19 243 86 1751 159 0 7 chr20 31950306 31950596 -34717409 - AluJb SINE Alu -24 288 1 915 174 35 35 chr20 31950603 31950775 -34717230 - FAM SINE Alu -3 172 1 393 226 132 0 chr20 31950842 31950948 -34717057 + L2 LINE L2 3192 3311 -2 435 327 68 38 chr20 31951030 31951397 -34716608 - L2 LINE L2 -809 2505 2128 357 70 0 0 chr20 31951491 31951534 -34716471 - 5S rRNA rRNA -78 43 1 770 103 162 0 chr20 31951940 31952057 -34715948 + AluSq/x SINE Alu 2 137 -176 1889 121 16 22 chr20 31953174 31953488 -34714517 + AluSx SINE Alu 1 312 0 28 61 0 0 chr20 31954736 31954785 -34713220 + AT_rich Low_complexity Low_complexity 1 49 0 312 248 8 57 chr20 31955229 31955330 -34712675 - MER5A DNA MER1_type 0 189 40 2071 107 0 17 chr20 31955330 31955630 -34712375 - AluSx SINE Alu -17 295 1 312 248 8 57 chr20 31955630 31955661 -34712344 - MER5A DNA MER1_type -149 40 9 2161 103 27 0 chr20 31955797 31956097 -34711908 - AluSg SINE Alu -2 308 1 940 178 33 107 chr20 31956345 31956587 -34711418 - MER58A DNA MER1_type 0 224 1 1279 151 111 33 chr20 31956947 31957218 -34710787 + AluJo SINE Alu 1 292 -20 1713 176 0 3 chr20 31957376 31957665 -34710340 - AluJb SINE Alu -24 288 1 30 0 0 0 chr20 31957665 31957695 -34710310 + AT_rich Low_complexity Low_complexity 1 30 0 1300 196 50 21 chr20 31957695 31957975 -34710030 - AluJo SINE Alu -24 288 1 23 68 0 0 chr20 31958014 31958058 -34709947 + AT_rich Low_complexity Low_complexity 1 44 0 365 231 192 8 chr20 31958503 31958633 -34709372 + L2 LINE L2 3160 3313 0 2130 120 0 0 chr20 31958671 31958971 -34709034 - AluSg SINE Alu -10 300 1 800 118 15 15 chr20 31959013 31959148 -34708857 - FLAM_C SINE Alu -1 142 8 2180 97 0 0 chr20 31959173 31959461 -34708544 + AluSq SINE Alu 1 288 -25 1966 116 27 3 chr20 31959663 31959956 -34708049 + AluSx SINE Alu 1 300 -12 1596 161 70 0 chr20 31960095 31960368 -34707637 - AluJb SINE Alu -16 296 5 1413 164 30 43 chr20 31960374 31960673 -34707332 - AluJo SINE Alu -17 295 1 614 146 127 0 chr20 31961003 31961116 -34706889 - MSTC LTR MaLR -1 427 301 * 765 114 57 0 chr20 31961113 31961218 -34706787 - AluSq/x SINE Alu -200 112 2 413 267 70 37 chr20 31961219 31961262 -34706743 - L1MC4 LINE L1 -190 7852 7812 2002 106 62 3 chr20 31961262 31961554 -34706451 + AluSx SINE Alu 1 309 -3 413 267 70 37 chr20 31961554 31961697 -34706308 - L1MC4 LINE L1 -230 7812 7660 1814 158 3 7 chr20 31961745 31962061 -34705944 - AluJb SINE Alu 0 316 2 343 0 0 41 chr20 31962301 31962350 -34705655 + (TTTTA)n Simple_repeat Simple_repeat 2 48 0 2150 112 0 3 chr20 31962368 31962654 -34705351 - AluSx SINE Alu -27 285 1 209 84 76 34 chr20 31962850 31962969 -34705036 + (TA)n Simple_repeat Simple_repeat 1 124 0 565 96 14 0 chr20 31963034 31963107 -34704898 + AluS SINE Alu 2 75 -237 385 105 86 0 chr20 31963125 31963287 -34704718 + (TA)n Simple_repeat Simple_repeat 2 177 0 528 110 14 0 chr20 31963289 31963362 -34704643 - AluS SINE Alu -237 75 2 1583 167 104 27 chr20 31963552 31963730 -34704275 - MER46B DNA MER2_type -2495 236 73 2274 113 0 0 chr20 31963730 31964031 -34703974 - AluSx SINE Alu -11 301 1 1583 167 104 27 chr20 31964031 31964051 -34703954 - MER46B DNA MER2_type -2658 73 56 279 0 0 0 chr20 31964051 31964082 -34703923 + (TG)n Simple_repeat Simple_repeat 2 32 0 1598 189 29 7 chr20 31964082 31964237 -34703768 - AluJb SINE Alu -26 286 121 333 0 0 0 chr20 31964237 31964274 -34703731 + (TG)n Simple_repeat Simple_repeat 2 38 0 1598 189 29 7 chr20 31964274 31964398 -34703607 - AluJb SINE Alu -191 121 1 1583 167 104 27 chr20 31964398 31964532 -34703473 - MER46B DNA MER2_type -2674 57 1 1586 99 5 18 chr20 31964924 31965145 -34702860 + AluSq SINE Alu 1 218 -95 2109 153 0 3 chr20 31965251 31965439 -34702566 - AluSx SINE Alu 0 312 124 207 0 0 0 chr20 31965439 31965462 -34702543 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2109 153 0 3 chr20 31965462 31965586 -34702419 - AluSx SINE Alu -188 124 1 2280 105 0 0 chr20 31965622 31965926 -34702079 + AluSx SINE Alu 1 304 -8 21 57 0 0 chr20 31966034 31966069 -34701936 + AT_rich Low_complexity Low_complexity 1 35 0 2123 100 7 20 chr20 31966078 31966377 -34701628 + AluSq SINE Alu 1 295 -18 1588 185 27 7 chr20 31966549 31966847 -34701158 + AluJo SINE Alu 2 305 -7 298 161 0 36 chr20 31966970 31967026 -34700979 + L2 LINE L2 2681 2734 -580 345 346 0 44 chr20 31967052 31967188 -34700817 + L2 LINE L2 2842 2971 -343 200 158 26 0 chr20 31967198 31967236 -34700769 + L2 LINE L2 3268 3306 -7 1739 179 18 0 chr20 31967294 31967579 -34700426 - AluJb SINE Alu -22 290 1 2595 53 0 0 chr20 31967592 31967892 -34700113 - AluY SINE Alu -11 300 1 2026 114 3 60 chr20 31968021 31968353 -34699652 - AluSp SINE Alu 0 313 1 1769 144 3 52 chr20 31968567 31968872 -34699133 + AluJb SINE Alu 1 290 -22 324 301 52 39 chr20 31968973 31969126 -34698879 - MIR3 SINE MIR -6 202 48 2473 56 0 7 chr20 31969381 31969686 -34698319 - AluY SINE Alu -8 303 1 2130 111 37 0 chr20 31970277 31970574 -34697431 - AluSx SINE Alu -4 308 1 539 307 141 49 chr20 31971714 31972288 -34695717 + L2 LINE L2 2557 3267 -5 2035 144 0 0 chr20 31972504 31972796 -34695209 - AluSx SINE Alu -20 292 1 381 213 147 93 chr20 31972796 31973021 -34694984 - HAL1 LINE L1 -985 1522 1286 1263 152 145 29 chr20 31973109 31973385 -34694620 + AluSx SINE Alu 1 308 -4 286 250 40 30 chr20 31973418 31973518 -34694487 - HAL1 LINE L1 -1599 908 808 1391 249 109 15 chr20 31973827 31974229 -34693776 + L2 LINE L2 2225 2664 -650 2055 127 0 3 chr20 31974247 31974554 -34693451 - AluSx SINE Alu 0 306 1 469 251 45 56 chr20 31974585 31974764 -34693241 - L1MEc LINE L1 -2258 3957 3781 25 0 0 0 chr20 31974956 31974981 -34693024 + AT_rich Low_complexity Low_complexity 1 25 0 419 305 66 47 chr20 31975247 31975565 -34692440 - L1ME3 LINE L1 -212 5950 5627 1946 119 65 0 chr20 31975669 31975946 -34692059 - AluSx SINE Alu -17 295 1 1739 158 56 6 chr20 31976091 31976414 -34691591 - MER47A DNA MER2_type 0 366 28 279 234 26 26 chr20 31976461 31976538 -34691467 - L1ME1 LINE L1 -25 6141 6065 22 0 0 0 chr20 31976546 31976568 -34691437 + AT_rich Low_complexity Low_complexity 1 22 0 829 177 27 0 chr20 31976568 31976715 -34691290 - FRAM SINE Alu -25 151 1 2242 231 28 54 chr20 31976715 31976962 -34691043 - L1ME1 LINE L1 -95 6140 5888 1836 157 27 7 chr20 31976962 31977256 -34690749 - AluJo SINE Alu 0 312 13 2242 231 28 54 chr20 31977256 31977561 -34690444 - L1ME1 LINE L1 -347 5888 5577 1788 173 3 16 chr20 31977561 31977867 -34690138 - AluJo SINE Alu -10 302 1 2242 231 28 54 chr20 31977867 31978189 -34689816 - L1ME1 LINE L1 -658 5577 2212 873 201 0 6 chr20 31978189 31978358 -34689647 - AluJo/FRAM SINE Alu -9 303 136 1998 107 11 0 chr20 31978360 31978630 -34689375 - AluSq SINE Alu -12 301 29 3175 227 110 55 chr20 31978724 31979559 -34688446 - L1MEc LINE L1 -3161 3054 2266 2188 108 0 0 chr20 31979559 31979846 -34688159 - AluSg SINE Alu -21 289 3 3175 227 110 55 chr20 31979846 31979905 -34688100 - L1MEc LINE L1 -3949 2266 2212 1964 140 7 19 chr20 31979905 31980075 -34687930 - AluSx SINE Alu -8 304 138 2395 88 0 3 chr20 31980075 31980380 -34687625 - AluSg SINE Alu -6 304 1 1964 140 7 19 chr20 31980380 31980517 -34687488 - AluSx SINE Alu -174 138 1 3175 227 110 55 chr20 31980517 31980797 -34687208 - L1MEc LINE L1 -4003 2212 1949 2073 136 0 0 chr20 31980797 31981092 -34686913 - AluSx SINE Alu -17 295 1 3175 227 110 55 chr20 31981092 31981879 -34686126 - L1MEc LINE L1 -4266 1949 973 2161 135 0 0 chr20 31981879 31982175 -34685830 - AluSx SINE Alu -14 298 3 3175 227 110 55 chr20 31982175 31982514 -34685491 - L1MEc LINE L1 -5242 973 654 223 350 44 22 chr20 31982645 31982782 -34685223 + L2 LINE L2 2595 2734 -580 743 56 64 30 chr20 31982961 31983100 -34684905 + MER30B DNA MER1_type 1 105 -85 1080 144 10 36 chr20 31983107 31983301 -34684704 - AluSg SINE Alu -3 307 119 868 153 0 0 chr20 31983347 31983478 -34684527 - AluSg SINE Alu -179 131 1 2054 114 13 10 chr20 31983478 31983777 -34684228 - AluSx SINE Alu -12 300 1 551 141 0 12 chr20 31983822 31983907 -34684098 + MER30B DNA MER1_type 147 230 0 464 167 44 0 chr20 31983966 31984056 -34683949 - L1MD3 LINE L1 -189 7806 7713 373 235 73 19 chr20 31984057 31984269 -34683736 - L1ME1 LINE L1 -263 5903 5796 243 73 49 0 chr20 31984246 31984287 -34683718 - L1MB5 LINE L1 0 6174 6132 * 856 120 0 15 chr20 31984287 31984420 -34683585 - AluSg/x SINE Alu -1 308 178 1246 202 24 12 chr20 31984420 31984667 -34683338 - L1MB5 LINE L1 -42 6132 5883 2741 256 111 45 chr20 31984667 31984678 -34683327 - L1MEc LINE L1 -4746 1650 1641 2766 23 0 0 chr20 31984678 31984987 -34683018 - AluYa5 SINE Alu -2 309 1 2741 256 111 45 chr20 31984987 31985034 -34682971 - L1MEc LINE L1 -4755 1641 1599 1767 125 107 4 chr20 31985034 31985306 -34682699 + AluSq SINE Alu 1 300 -13 2741 256 111 45 chr20 31985306 31985828 -34682177 - L1MEc LINE L1 -4797 1599 1113 2287 119 0 0 chr20 31985828 31986140 -34681865 - AluSx SINE Alu 0 312 1 2741 256 111 45 chr20 31986140 31987047 -34680958 - L1MEc LINE L1 -5283 1113 63 889 253 31 83 chr20 31987059 31987517 -34680488 - L1MD2 LINE L1 -2 6357 5924 1321 124 148 42 chr20 31987520 31987601 -34680404 - MER44D DNA MER2_type -1882 609 538 207 0 0 0 chr20 31987601 31987624 -34680381 + (TG)n Simple_repeat Simple_repeat 2 24 0 1321 124 148 42 chr20 31987624 31987640 -34680365 - MER44D DNA MER2_type -1953 538 525 2118 116 3 7 chr20 31987640 31987934 -34680071 - AluSx SINE Alu -19 293 1 1321 124 148 42 chr20 31987934 31988118 -34679887 - MER44D DNA MER2_type -1966 525 27 4268 224 57 48 chr20 31988126 31988322 -34679683 - L1MD2 LINE L1 -434 5925 5732 709 153 54 0 chr20 31988322 31988433 -34679572 - FLAM_C SINE Alu -16 117 1 4268 224 57 48 chr20 31988433 31989486 -34678519 - L1MD2 LINE L1 -627 5732 4690 1698 181 7 0 chr20 31989486 31989785 -34678220 - AluJo SINE Alu -3 309 9 4268 224 57 48 chr20 31989785 31989956 -34678049 - L1MD2 LINE L1 -1669 4690 4522 2660 134 26 0 chr20 31989956 31990375 -34677630 - L1MA4 LINE L1 -1 6299 5870 4268 224 57 48 chr20 31990375 31990985 -34677020 - L1MD2 LINE L1 -1837 4522 3879 355 166 165 9 chr20 31990987 31991112 -34676893 - L1ME LINE L1 -721 5443 5299 1807 219 77 44 chr20 31991163 31991204 -34676801 - L1MC4 LINE L1 -142 7900 7862 1399 147 191 8 chr20 31991204 31991456 -34676549 - AluJo SINE Alu -4 298 1 1807 219 77 44 chr20 31991456 31991984 -34676021 - L1MC4 LINE L1 -180 7862 7312 322 96 0 19 chr20 31991990 31992042 -34675963 - AluSp/q SINE Alu -11 292 242 846 277 112 10 chr20 31992077 31992344 -34675661 - L1MC4 LINE L1 -1249 6793 6490 1843 146 3 14 chr20 31992344 31992632 -34675373 + AluJb SINE Alu 1 285 -27 846 277 112 10 chr20 31992632 31992667 -34675338 - L1MC4 LINE L1 -1552 6490 6460 2020 125 0 27 chr20 31993142 31993439 -34674566 + AluSx SINE Alu 5 293 -19 1080 246 122 52 chr20 31993465 31993537 -34674468 - L1ME LINE L1 -874 5272 5206 1660 165 39 7 chr20 31993537 31993822 -34674183 - AluJb SINE Alu -8 304 11 180 0 0 0 chr20 31993824 31993844 -34674161 + (GCCTG)n Simple_repeat Simple_repeat 1 20 0 1080 246 122 52 chr20 31993844 31994023 -34673982 - L1ME LINE L1 -940 5206 5041 2042 125 17 3 chr20 31994023 31994312 -34673693 - AluSx SINE Alu -19 293 1 1080 246 122 52 chr20 31994312 31994629 -34673376 - L1ME LINE L1 -1105 5041 4660 861 194 17 6 chr20 31994629 31994809 -34673196 - AluJo SINE Alu -9 303 122 884 183 110 38 chr20 31994809 31995030 -34672975 - L1ME LINE L1 -1491 4655 4403 2161 103 6 31 chr20 31995030 31995351 -34672654 - AluSq SINE Alu 0 313 1 884 183 110 38 chr20 31995351 31995446 -34672559 - L1ME LINE L1 -1743 4403 4316 1619 216 104 43 chr20 31995486 31995671 -34672334 - L1MC4 LINE L1 -106 7936 7764 1106 171 6 6 chr20 31995671 31995841 -34672164 + FAM SINE Alu 1 170 -5 1619 216 104 43 chr20 31995841 31996230 -34671775 - L1MC4 LINE L1 -278 7764 7327 1581 139 67 84 chr20 31996250 31996384 -34671621 - MER44D DNA MER2_type -1882 609 474 685 215 0 30 chr20 31996384 31996519 -34671486 - AluJo SINE Alu -171 131 1 1581 139 67 84 chr20 31996519 31996729 -34671276 - MER44D DNA MER2_type -2017 474 1 2029 237 115 62 chr20 31996729 31996825 -34671180 - L1MC4a LINE L1 -607 7201 7112 2300 114 0 9 chr20 31996825 31997140 -34670865 + AluSx SINE Alu 1 312 0 2029 237 115 62 chr20 31997140 31997291 -34670714 - L1MC4a LINE L1 -696 7112 6970 2190 108 6 19 chr20 31997291 31997606 -34670399 - AluSx SINE Alu -1 311 1 2141 126 13 7 chr20 31997615 31997916 -34670089 - AluSx SINE Alu -9 303 1 2029 237 115 62 chr20 31997916 31998577 -34669428 - L1MC4a LINE L1 -845 6963 6233 1397 160 153 8 chr20 31998673 31998935 -34669070 - AluJo SINE Alu 0 302 3 253 299 26 0 chr20 31998940 31999017 -34668988 + L1MC4a LINE L1 5542 5620 -2188 1242 229 61 57 chr20 31999031 31999556 -34668449 + L1MC4a LINE L1 5691 6217 -1591 899 232 171 70 chr20 31999634 31999682 -34668323 - HAL1 LINE L1 -608 1899 1857 645 205 9 0 chr20 31999682 31999794 -34668211 + MER81 DNA DNA 1 113 -1 899 232 171 70 chr20 31999794 32000399 -34667606 - HAL1 LINE L1 -650 1857 1180 22 0 0 0 chr20 32000483 32000505 -34667500 + AT_rich Low_complexity Low_complexity 1 22 0 647 205 0 33 chr20 32000513 32000635 -34667370 + FLAM_A SINE Alu 8 125 -17 809 292 96 84 chr20 32000657 32001050 -34666955 - HAL1 LINE L1 -1520 987 600 2148 107 0 7 chr20 32001050 32001387 -34666618 - AluSq SINE Alu 0 313 1 809 292 96 84 chr20 32001387 32001961 -34666044 - HAL1 LINE L1 -1907 600 8 432 222 8 34 chr20 32002023 32002140 -34665865 + L1ME2 LINE L1 4479 4592 -1554 404 125 0 0 chr20 32002158 32002222 -34665783 - L1MA4 LINE L1 -11 6289 6226 863 159 0 0 chr20 32002233 32002390 -34665615 - L1MA4 LINE L1 -129 6171 6015 230 240 70 10 chr20 32002599 32002699 -34665306 - L1M4 LINE L1 -348 5830 5725 864 190 118 97 chr20 32003033 32003364 -34664641 + MER46C DNA MER2_type 1 338 0 23 0 0 0 chr20 32003799 32003822 -34664183 + AT_rich Low_complexity Low_complexity 1 23 0 1629 167 10 42 chr20 32003842 32003975 -34664030 + AluJb SINE Alu 1 137 -175 2173 104 0 3 chr20 32003975 32004263 -34663742 + AluSg SINE Alu 1 287 -23 239 0 0 31 chr20 32004270 32004302 -34663703 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1629 167 10 42 chr20 32004302 32004471 -34663534 + AluJb SINE Alu 143 301 -11 1014 182 50 5 chr20 32004518 32004716 -34663289 - L1MB7 LINE L1 -15 6169 5963 443 227 100 105 chr20 32004748 32004899 -34663106 - L1M4 LINE L1 -1430 4716 4566 2337 116 0 0 chr20 32004899 32005209 -34662796 - AluSg SINE Alu 0 310 1 443 227 100 105 chr20 32005209 32005278 -34662727 - L1M4 LINE L1 -1580 4566 4498 1942 152 3 3 chr20 32005278 32005581 -34662424 - AluJo SINE Alu -9 303 1 443 227 100 105 chr20 32005581 32005720 -34662285 - L1M4 LINE L1 -1648 4498 4358 2219 106 7 0 chr20 32005757 32006058 -34661947 - AluSq SINE Alu -10 303 1 3040 166 115 83 chr20 32006836 32006927 -34661078 + L1ME2 LINE L1 5270 5357 -807 3172 65 2 12 chr20 32006927 32007329 -34660676 + L1PA8 LINE L1 5775 6172 0 3040 166 115 83 chr20 32007329 32007936 -34660069 + L1ME2 LINE L1 5357 6004 -160 2603 40 0 34 chr20 32007936 32008257 -34659748 - AluY SINE Alu -1 310 1 3040 166 115 83 chr20 32008257 32008424 -34659581 + L1ME2 LINE L1 6004 6164 0 422 238 0 10 chr20 32008457 32008558 -34659447 - L1MC4 LINE L1 -224 7818 7719 258 79 53 0 chr20 32008565 32008603 -34659402 + L1MA9 LINE L1 6112 6151 -161 2456 89 0 0 chr20 32008659 32008963 -34659042 - AluSg SINE Alu -6 304 1 597 91 53 174 chr20 32009241 32009302 -34658703 + AluJo SINE Alu 21 88 -224 1913 121 16 45 chr20 32009302 32009616 -34658389 - AluSx SINE Alu -6 306 2 1839 157 7 0 chr20 32009620 32009927 -34658078 - AluSx SINE Alu 0 309 1 597 91 53 174 chr20 32009927 32009991 -34658014 + AluJo SINE Alu 91 136 -176 278 266 131 48 chr20 32010236 32010331 -34657674 - L1ME4a LINE L1 0 6121 6035 2248 106 0 3 chr20 32010331 32010632 -34657373 + AluSx SINE Alu 1 300 -12 278 266 131 48 chr20 32010632 32010826 -34657179 - L1ME4a LINE L1 -86 6035 5808 1491 246 78 102 chr20 32010870 32011785 -34656220 - L1ME3A LINE L1 0 6170 5274 2069 118 7 0 chr20 32011804 32012083 -34655922 - AluSx SINE Alu -31 281 1 536 359 104 20 chr20 32012093 32012369 -34655636 - L1ME3A LINE L1 -875 5271 4969 2259 93 3 16 chr20 32012627 32012940 -34655065 - AluSc SINE Alu 0 309 1 310 288 45 128 chr20 32013542 32014011 -34653994 + L2 LINE L2 2843 3272 0 2242 119 3 0 chr20 32014728 32015039 -34652966 - AluSx SINE Alu 0 312 1 219 249 263 3 chr20 32015096 32015208 -34652797 + MIR3 SINE MIR 12 154 -97 184 325 92 33 chr20 32016301 32016421 -34651584 + L2 LINE L2 3145 3271 -1 3087 181 32 18 chr20 32018163 32018716 -34649289 - MER68 LTR ERV1 -1 561 1 303 250 71 57 chr20 32026318 32026458 -34641547 + MIR SINE MIR 35 176 -86 1255 144 79 18 chr20 32027222 32027451 -34640554 - AluJo SINE Alu -17 295 53 393 266 88 6 chr20 32028227 32028397 -34639608 + L1MC4 LINE L1 1943 6983 -1339 371 397 42 35 chr20 32028291 32028603 -34639402 - L1MC4 LINE L1 -1339 6703 6390 * 234 0 0 0 chr20 32033482 32033508 -34634497 + (A)n Simple_repeat Simple_repeat 1 26 0 222 204 0 0 chr20 32033811 32033865 -34634140 + (TGG)n Simple_repeat Simple_repeat 1 54 0 323 246 152 11 chr20 32034894 32035003 -34633002 + MIR SINE MIR 29 151 -57 214 307 144 25 chr20 32037324 32037526 -34630479 + L2 LINE L2 2643 2868 -446 276 317 49 0 chr20 32039208 32039290 -34628715 + MIR SINE MIR 98 183 -79 221 231 0 19 chr20 32039703 32039755 -34628250 + (TCG)n Simple_repeat Simple_repeat 1 51 0 311 287 62 54 chr20 32039962 32040091 -34627914 + MIR SINE MIR 78 207 -55 181 320 0 0 chr20 32040804 32040854 -34627151 - L2 LINE L2 -87 3185 3136 182 268 62 62 chr20 32041079 32041176 -34626829 + MIR SINE MIR 28 124 -84 196 239 104 15 chr20 32041487 32041554 -34626451 - MIR3 SINE MIR -47 161 89 204 40 0 0 chr20 32043314 32043339 -34624666 + (CCCCAG)n Simple_repeat Simple_repeat 2 26 0 185 284 193 11 chr20 32043972 32044060 -34623945 - L2 LINE L2 -7 3306 3203 185 250 39 0 chr20 32044738 32044790 -34623215 + MIR SINE MIR 95 148 -60 233 330 57 0 chr20 32045221 32045309 -34622696 - Charlie8 DNA MER1_type -2244 173 81 1275 156 111 59 chr20 32045320 32045459 -34622546 - AluJo SINE Alu -8 304 174 2289 95 0 3 chr20 32045459 32045763 -34622242 - AluSq SINE Alu -10 303 1 1275 156 111 59 chr20 32045763 32045912 -34622093 - AluJo SINE Alu -138 174 1 980 237 95 0 chr20 32045935 32046287 -34621718 + L1MB4 LINE L1 5752 6161 -10 201 341 11 0 chr20 32046980 32047068 -34620937 + L2 LINE L2 2976 3064 -208 331 299 75 0 chr20 32047344 32047491 -34620514 + L2 LINE L2 2933 3090 -223 2441 81 0 0 chr20 32047491 32047800 -34620205 - AluY SINE Alu -2 309 1 238 291 156 22 chr20 32048024 32048203 -34619802 + MLT1K LTR MaLR 112 314 -274 2367 80 0 0 chr20 32048703 32049002 -34619003 + AluSc SINE Alu 1 299 -10 984 229 62 14 chr20 32050764 32051052 -34616953 - MER33 DNA MER1_type 0 324 23 2019 115 49 0 chr20 32052056 32052344 -34615661 - AluSx SINE Alu -8 304 3 2352 93 0 6 chr20 32054697 32055009 -34612996 + AluSg SINE Alu 1 310 0 213 326 35 0 chr20 32055084 32055170 -34612835 + MIR SINE MIR 84 172 -90 2285 100 3 3 chr20 32055440 32055749 -34612256 - AluSp SINE Alu -4 309 1 326 224 0 0 chr20 32056467 32056534 -34611471 - L2 LINE L2 0 3272 3206 2720 122 44 2 chr20 32057699 32058108 -34609897 + MSTB LTR MaLR 1 426 0 342 0 0 0 chr20 32062277 32062315 -34605690 + (CA)n Simple_repeat Simple_repeat 2 39 0 508 301 177 26 chr20 32062696 32063075 -34604930 - L2 LINE L2 0 3313 2878 515 258 8 0 chr20 32063295 32063423 -34604582 - MIR SINE MIR -73 189 61 288 0 0 0 chr20 32064321 32064353 -34603652 + (CA)n Simple_repeat Simple_repeat 2 33 0 261 122 24 0 chr20 32064403 32064444 -34603561 - L2 LINE L2 -17 3255 3214 1416 165 86 8 chr20 32064693 32064960 -34603045 - AluJb SINE Alu -24 288 1 759 189 0 23 chr20 32065528 32065660 -34602345 + FLAM_C SINE Alu 1 129 -4 21 0 0 0 chr20 32068033 32068054 -34599951 + GC_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr20 32068953 32068975 -34599030 + GC_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr20 32069377 32069401 -34598604 + GC_rich Low_complexity Low_complexity 1 24 0 213 94 0 0 chr20 32069522 32069554 -34598451 + (CTG)n Simple_repeat Simple_repeat 3 34 0 25 31 0 0 chr20 32069638 32069670 -34598335 + GC_rich Low_complexity Low_complexity 1 32 0 191 152 22 0 chr20 32069698 32069744 -34598261 + G-rich Low_complexity Low_complexity 2 48 0 482 295 6 22 chr20 32069771 32069954 -34598051 + G-rich Low_complexity Low_complexity 1 180 0 201 356 0 10 chr20 32070480 32070581 -34597424 + C-rich Low_complexity Low_complexity 2 101 0 33 25 0 0 chr20 32070643 32070683 -34597322 + GC_rich Low_complexity Low_complexity 1 40 0 288 70 0 0 chr20 32071137 32071180 -34596825 + (A)n Simple_repeat Simple_repeat 1 43 0 696 268 29 29 chr20 32072733 32073013 -34594992 + L1MC4 LINE L1 7284 7563 -479 2192 106 3 3 chr20 32073065 32073376 -34594629 + AluSx SINE Alu 1 311 -1 304 288 220 12 chr20 32073471 32073874 -34594131 - L2 LINE L2 -223 3090 2618 296 241 48 12 chr20 32073899 32073982 -34594023 + MIR SINE MIR 52 137 -125 1700 148 0 7 chr20 32073994 32074272 -34593733 - AluSx SINE Alu 0 312 37 616 234 80 0 chr20 32074340 32074502 -34593503 + MLT1F LTR MaLR 1 184 -380 462 317 44 52 chr20 32074572 32074812 -34593193 - L1MC/D LINE L1 -744 5402 5162 1136 66 17 22 chr20 32074812 32074993 -34593012 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 462 317 44 52 chr20 32074993 32075425 -34592580 - L1MC/D LINE L1 -984 5162 4912 951 204 0 0 chr20 32075425 32075597 -34592408 - FRAM SINE Alu -4 172 1 953 130 0 0 chr20 32075742 32075918 -34592087 + AluYa5 SINE Alu 136 311 0 2200 110 0 0 chr20 32075925 32076224 -34591781 + AluSx SINE Alu 1 299 -13 245 146 21 0 chr20 32076224 32076272 -34591733 + (TA)n Simple_repeat Simple_repeat 1 49 0 189 338 110 48 chr20 32076856 32077084 -34590921 + L2 LINE L2 2699 2940 -374 299 316 6 140 chr20 32077108 32077443 -34590562 - L2 LINE L2 -5 3267 2978 1600 246 75 39 chr20 32077836 32077912 -34590093 + L1ME3A LINE L1 5616 5688 -482 1769 174 17 0 chr20 32077912 32078211 -34589794 + AluJo SINE Alu 1 304 -8 1600 246 75 39 chr20 32078211 32078670 -34589335 + L1ME3A LINE L1 5688 6170 0 313 294 106 35 chr20 32078743 32078913 -34589092 - MIR SINE MIR -28 234 53 494 294 29 24 chr20 32079550 32079720 -34588285 + MIR SINE MIR 65 235 -27 299 277 45 36 chr20 32079781 32079893 -34588112 - L2 LINE L2 -6 3266 3154 2214 119 7 0 chr20 32080049 32080359 -34587646 + AluSx SINE Alu 1 312 0 242 268 12 24 chr20 32080495 32080577 -34587428 + CT-rich Low_complexity Low_complexity 3 83 0 255 232 91 40 chr20 32080718 32080817 -34587188 + LTR67 LTR ERVL 92 195 -362 198 371 51 34 chr20 32081674 32081764 -34586241 - MIR3 SINE MIR -15 193 106 1542 132 33 4 chr20 32081764 32082006 -34585999 + AluJo SINE Alu 5 253 -59 198 371 51 34 chr20 32082006 32082090 -34585915 - MIR3 SINE MIR -102 106 16 756 328 125 3 chr20 32082265 32082616 -34585389 + L2 LINE L2 2919 3312 -1 2168 98 16 10 chr20 32082624 32082929 -34585076 - AluSq SINE Alu -6 307 1 189 0 0 0 chr20 32083135 32083156 -34584849 + (A)n Simple_repeat Simple_repeat 1 21 0 2045 130 3 7 chr20 32084563 32084870 -34583135 + AluJb SINE Alu 5 310 -2 306 157 0 43 chr20 32084890 32084949 -34583056 + AluJb SINE Alu 69 126 -176 2058 111 3 20 chr20 32084949 32085255 -34582750 - AluSg SINE Alu -9 301 1 2127 138 0 0 chr20 32085535 32085846 -34582159 + AluSx SINE Alu 1 311 -1 278 308 71 33 chr20 32085876 32086116 -34581889 + L1M4 LINE L1 4677 4925 -1221 448 239 9 9 chr20 32086181 32086290 -34581715 + L1MC3 LINE L1 6617 6725 -1060 684 175 66 44 chr20 32086290 32086427 -34581578 - FLAM_C SINE Alu -2 141 2 1587 68 0 89 chr20 32086431 32086679 -34581326 - AluY SINE Alu -11 300 75 3366 157 104 122 chr20 32086683 32087068 -34580937 + L1MC3 LINE L1 6720 7110 -675 233 342 0 0 chr20 32087068 32087144 -34580861 + MLT1F1 LTR MaLR 33 108 -459 3366 157 104 122 chr20 32087144 32087768 -34580237 + L1MC3 LINE L1 7110 7785 0 301 252 176 8 chr20 32087772 32087891 -34580114 + L1M4 LINE L1 5023 5161 -985 971 261 31 39 chr20 32087943 32088357 -34579648 + HAL1 LINE L1 2028 2438 -69 2058 104 21 0 chr20 32088389 32088676 -34579329 + AluSx SINE Alu 1 293 -19 2317 87 3 0 chr20 32088707 32089017 -34578988 + AluSq SINE Alu 1 311 -2 311 317 66 54 chr20 32090052 32090353 -34577652 - L1MEc LINE L1 -4082 2947 1738 2349 93 0 0 chr20 32090357 32090668 -34577337 + AluY SINE Alu 1 311 0 2002 99 25 0 chr20 32090692 32090976 -34577029 - AluSc SINE Alu -18 291 1 1969 129 54 75 chr20 32091382 32091519 -34576486 + L1MB4 LINE L1 5720 5858 -322 1642 161 40 17 chr20 32091519 32091818 -34576187 + AluJb SINE Alu 1 306 -6 1969 129 54 75 chr20 32091818 32092145 -34575860 + L1MB4 LINE L1 5858 6174 -6 2286 83 3 0 chr20 32092458 32092759 -34575246 + AluSp SINE Alu 1 302 -11 1795 131 3 14 chr20 32093806 32094123 -34573882 + AluSg SINE Alu 1 314 0 410 307 70 66 chr20 32094975 32095340 -34572665 + L2 LINE L2 2856 3225 -88 1936 119 3 3 chr20 32095340 32095626 -34572379 + AluSx SINE Alu 27 312 0 410 307 70 66 chr20 32095626 32095716 -34572289 + L2 LINE L2 3225 3313 0 258 271 107 33 chr20 32097652 32097774 -34570231 + Charlie8 DNA MER1_type 1 131 -2286 1720 131 0 85 chr20 32097781 32098110 -34569895 + AluJo SINE Alu 1 301 -11 492 230 44 7 chr20 32098153 32098288 -34569717 + Charlie8 DNA MER1_type 137 276 -2141 324 191 67 29 chr20 32098571 32098676 -34569329 - L1ME4a LINE L1 0 6121 6013 580 255 102 59 chr20 32098775 32099097 -34568908 - L1ME4a LINE L1 -237 5884 5549 1453 196 34 19 chr20 32099390 32099659 -34568346 + L1MB4 LINE L1 5853 6129 -51 1515 148 79 7 chr20 32099659 32099950 -34568055 + AluJo SINE Alu 1 312 0 1453 196 34 19 chr20 32099950 32100002 -34568003 + L1MB4 LINE L1 6129 6179 -1 1941 133 7 3 chr20 32100288 32100589 -34567416 + AluSx SINE Alu 1 302 -10 471 222 37 30 chr20 32102686 32102821 -34565184 - MIR SINE MIR -81 181 46 279 203 156 0 chr20 32104015 32104079 -34563926 + MIR SINE MIR 107 180 -82 225 241 152 18 chr20 32104086 32104198 -34563807 - MIR3 SINE MIR -74 134 8 423 230 20 0 chr20 32105110 32105210 -34562795 - MIR SINE MIR -62 146 45 1067 170 0 0 chr20 32105886 32106051 -34561954 - FRAM SINE Alu -1 165 1 2252 74 7 10 chr20 32106082 32106381 -34561624 + AluY SINE Alu 1 298 -13 247 299 72 0 chr20 32107544 32107641 -34560364 - MIR SINE MIR -61 147 44 385 350 49 0 chr20 32110385 32110528 -34557477 - L3 LINE CR1 -54 1523 1374 439 269 145 0 chr20 32111456 32111601 -34556404 + MIR SINE MIR 2 167 -95 1548 161 68 7 chr20 32111673 32111823 -34556182 - AluJo SINE Alu -12 300 161 2056 144 0 6 chr20 32111823 32112136 -34555869 - AluSx SINE Alu -1 311 1 1548 161 68 7 chr20 32112136 32112264 -34555741 - AluJo SINE Alu -151 161 5 429 288 94 12 chr20 32112740 32112910 -34555095 + MIR SINE MIR 31 214 -48 214 269 19 0 chr20 32113389 32113441 -34554564 + MIR SINE MIR 188 240 -22 446 281 23 16 chr20 32115045 32115173 -34552832 + L2 LINE L2 3185 3313 0 405 318 126 9 chr20 32115190 32115404 -34552601 + MIR SINE MIR 22 260 -2 182 326 0 0 chr20 32115929 32115978 -34552027 + MIR SINE MIR 78 126 -82 2471 54 0 0 chr20 32116338 32116632 -34551373 + AluY SINE Alu 1 294 -17 407 197 28 148 chr20 32116647 32116718 -34551287 + L1ME3A LINE L1 6046 6093 -77 2247 105 3 0 chr20 32116718 32117022 -34550983 + AluSp SINE Alu 1 305 -8 407 197 28 148 chr20 32117022 32117092 -34550913 + L1ME3A LINE L1 6093 6170 0 242 188 47 0 chr20 32117119 32117183 -34550822 - L1MB2 LINE L1 -1 6170 6104 218 255 87 137 chr20 32117392 32117446 -34550559 + MIR SINE MIR 66 121 -141 1911 119 63 0 chr20 32117446 32117731 -34550274 - AluSx SINE Alu -9 303 1 218 255 87 137 chr20 32117731 32117837 -34550168 + MIR SINE MIR 121 218 -44 848 168 8 0 chr20 32119083 32119214 -34548791 + FLAM_A SINE Alu 1 132 -1 739 201 123 7 chr20 32119375 32119529 -34548476 + MER5A DNA MER1_type 18 189 0 1724 134 0 88 chr20 32120649 32120978 -34547027 + AluJb SINE Alu 1 300 -12 212 313 9 80 chr20 32122094 32122206 -34545799 + MIR SINE MIR 88 191 -71 23 54 0 0 chr20 32122554 32122591 -34545414 + GC_rich Low_complexity Low_complexity 1 37 0 22 70 0 0 chr20 32122613 32122656 -34545349 + GC_rich Low_complexity Low_complexity 1 43 0 226 262 21 41 chr20 32123003 32123148 -34544857 + (CCCG)n Simple_repeat Simple_repeat 1 142 0 217 321 207 7 chr20 32123206 32123346 -34544659 - MIR SINE MIR -14 248 81 466 260 198 6 chr20 32123489 32123666 -34544339 - MIR SINE MIR -22 240 30 2143 123 0 0 chr20 32123855 32124157 -34543848 - AluSx SINE Alu -10 302 1 204 329 14 14 chr20 32124197 32124270 -34543735 - MIR3 SINE MIR -19 189 117 480 18 0 0 chr20 32124524 32124581 -34543424 + (TCCC)n Simple_repeat Simple_repeat 2 58 0 310 270 14 0 chr20 32125278 32125352 -34542653 + MIR SINE MIR 14 88 -174 203 225 352 14 chr20 32125435 32125577 -34542428 + MIR3 SINE MIR 3 192 -16 226 342 26 8 chr20 32125717 32125834 -34542171 + MIR SINE MIR 31 149 -113 223 232 18 0 chr20 32126630 32126686 -34541319 - L2 LINE L2 0 3313 3257 323 295 78 16 chr20 32126720 32126849 -34541156 + MIR SINE MIR 98 234 -28 235 364 42 17 chr20 32126891 32127009 -34540996 - MIR SINE MIR -34 228 108 360 0 0 0 chr20 32127086 32127126 -34540879 + (CA)n Simple_repeat Simple_repeat 2 41 0 187 261 0 0 chr20 32127299 32127345 -34540660 + L2 LINE L2 3268 3313 0 340 240 144 144 chr20 32128349 32128441 -34539564 + MIR SINE MIR 2 93 -169 1891 152 3 3 chr20 32128441 32128731 -34539274 - AluJb SINE Alu -22 290 1 340 240 144 144 chr20 32128731 32128888 -34539117 + MIR SINE MIR 92 251 -11 489 285 52 0 chr20 32128889 32129061 -34538944 + MIR SINE MIR 43 223 -39 275 280 34 25 chr20 32129218 32129336 -34538669 - L2 LINE L2 -162 3110 2992 1459 122 0 39 chr20 32129358 32129415 -34538590 + AluSg/x SINE Alu 83 141 -169 2195 112 3 0 chr20 32129415 32129718 -34538287 + AluSx SINE Alu 1 304 -8 1459 122 0 39 chr20 32129718 32129890 -34538115 + AluSg/x SINE Alu 141 303 -7 450 314 47 26 chr20 32130151 32130342 -34537663 - L2 LINE L2 -551 2763 2569 275 354 62 42 chr20 32130418 32130706 -34537299 - L2 LINE L2 -397 2917 2624 268 255 69 20 chr20 32130783 32130885 -34537120 - MIR SINE MIR -150 112 6 598 236 88 0 chr20 32130938 32131086 -34536919 - MIR SINE MIR -70 192 32 1113 128 0 39 chr20 32131194 32131374 -34536631 + FRAM SINE Alu 1 165 -11 184 255 21 0 chr20 32131416 32131463 -34536542 + L2 LINE L2 2107 2154 -1160 660 204 136 6 chr20 32131652 32131828 -34536177 + L2 LINE L2 2360 2558 -756 180 373 0 0 chr20 32131869 32131928 -34536077 + MIR3 SINE MIR 100 158 -50 2328 91 3 0 chr20 32132014 32132323 -34535682 - AluSg SINE Alu 0 310 1 1118 123 69 30 chr20 32132323 32132517 -34535488 - AluSp SINE Alu -11 302 98 1993 119 31 0 chr20 32132517 32132810 -34535195 - AluSp SINE Alu -10 303 2 378 244 23 0 chr20 32132940 32133026 -34534979 + L2 LINE L2 3185 3272 0 812 268 38 42 chr20 32133147 32133377 -34534628 - MIR SINE MIR -2 260 30 1816 151 3 3 chr20 32133377 32133668 -34534337 - AluJb SINE Alu -21 291 1 812 268 38 42 chr20 32133668 32133698 -34534307 - MIR SINE MIR -232 30 1 202 280 53 53 chr20 32133923 32134073 -34533932 + L2 LINE L2 2910 3059 -213 425 204 97 1 chr20 32134175 32134291 -34533714 - MIR SINE MIR -65 143 39 789 266 83 34 chr20 32134710 32135060 -34532945 + L1MC4a LINE L1 5529 5895 -1913 * 2738 159 24 14 chr20 32135058 32135548 -34532457 + L1MB8 LINE L1 5011 5515 -663 2071 106 3 0 chr20 32135548 32135853 -34532152 + AluSx SINE Alu 1 306 0 2738 159 24 14 chr20 32135853 32136172 -34531833 + L1MB8 LINE L1 5515 5829 -349 612 148 31 4 chr20 32136172 32136323 -34531682 - MER7A DNA MER2_type 0 336 120 1092 110 86 0 chr20 32136328 32136491 -34531514 - AluSg/x SINE Alu -16 294 118 488 109 0 174 chr20 32136491 32136541 -34531464 - MER7A DNA MER2_type -2925 113 56 1965 139 0 3 chr20 32136541 32136677 -34531328 + AluSx SINE Alu 1 136 -176 2345 87 0 10 chr20 32136677 32136987 -34531018 + AluSg SINE Alu 1 307 -3 1965 139 0 3 chr20 32136987 32137151 -34530854 + AluSx SINE Alu 136 300 -12 488 109 0 174 chr20 32137151 32137171 -34530834 - MER7A DNA MER2_type -2982 56 34 2074 123 0 0 chr20 32137171 32137456 -34530549 + AluSx SINE Alu 1 285 -27 366 74 0 0 chr20 32137456 32137510 -34530495 + (CAT)n Simple_repeat Simple_repeat 2 55 0 488 109 0 174 chr20 32137510 32137575 -34530430 - MER7A DNA MER2_type -3002 36 2 1692 132 38 74 chr20 32137575 32137866 -34530139 + L1MB8 LINE L1 5827 6104 -74 1861 167 3 3 chr20 32137866 32138166 -34529839 - AluJo SINE Alu -12 300 1 1692 132 38 74 chr20 32138166 32138239 -34529766 + L1MB8 LINE L1 6104 6178 0 24 0 0 0 chr20 32138450 32138474 -34529531 + AT_rich Low_complexity Low_complexity 1 24 0 2136 103 0 0 chr20 32138482 32138787 -34529218 + AluSq SINE Alu 1 305 0 1768 118 8 4 chr20 32138798 32139053 -34528952 + AluSx SINE Alu 1 256 -56 571 194 70 60 chr20 32139175 32139376 -34528629 + L2 LINE L2 2480 2682 -632 891 268 140 17 chr20 32139377 32139799 -34528206 + L2 LINE L2 2831 3304 -9 945 211 104 11 chr20 32139816 32140095 -34527910 + L1MD3 LINE L1 7689 7993 -2 2544 49 0 3 chr20 32140116 32140424 -34527581 + AluY SINE Alu 1 307 -4 276 344 51 32 chr20 32140903 32141060 -34526945 - MIR SINE MIR -4 258 99 708 330 62 71 chr20 32141087 32141296 -34526709 + L2 LINE L2 2823 3032 -240 1982 157 54 57 chr20 32141296 32141390 -34526615 + MLT1B LTR MaLR 1 94 -296 1360 194 56 18 chr20 32141390 32141674 -34526331 - AluJo SINE Alu -17 295 1 1982 157 54 57 chr20 32141674 32141967 -34526038 + MLT1B LTR MaLR 94 387 -3 708 330 62 71 chr20 32141967 32142209 -34525796 + L2 LINE L2 3032 3270 -2 199 348 61 17 chr20 32142355 32142470 -34525535 + L3 LINE CR1 586 705 -872 188 313 31 52 chr20 32142624 32142720 -34525285 - MIR SINE MIR -135 127 34 217 333 0 0 chr20 32142859 32142922 -34525083 - MIR SINE MIR -91 117 55 222 301 165 10 chr20 32143047 32143150 -34524855 + MIR SINE MIR 33 151 -57 1811 129 48 4 chr20 32143860 32144132 -34523873 + AluJb SINE Alu 1 284 -28 228 348 0 36 chr20 32144541 32144653 -34523352 - MIR3 SINE MIR -27 181 74 423 324 24 12 chr20 32144767 32144937 -34523068 - L2 LINE L2 -471 2843 2672 223 276 105 0 chr20 32145061 32145137 -34522868 + L3 LINE CR1 1419 1502 -75 337 247 282 11 chr20 32145171 32145345 -34522660 + L2 LINE L2 3027 3247 -25 321 250 26 0 chr20 32145399 32145475 -34522530 + L2 LINE L2 3187 3264 -8 481 280 15 0 chr20 32145615 32145747 -34522258 - MIR SINE MIR -96 166 33 355 270 21 5 chr20 32146412 32146538 -34521467 - MIR SINE MIR -58 150 34 997 238 44 4 chr20 32146600 32146848 -34521157 - MIR SINE MIR -3 259 2 512 266 178 6 chr20 32147747 32147916 -34520089 + MIR SINE MIR 20 217 -45 1084 127 0 0 chr20 32147916 32148093 -34519912 + AluJb SINE Alu 133 309 0 355 277 169 54 chr20 32148448 32148632 -34519373 + L1M4 LINE L1 3072 3276 -2870 272 173 8 45 chr20 32148680 32148813 -34519192 + GA-rich Low_complexity Low_complexity 2 129 0 202 267 0 0 chr20 32148817 32148862 -34519143 - L2 LINE L2 -17 3255 3211 352 294 0 10 chr20 32149155 32149257 -34518748 - MIR SINE MIR -57 151 51 596 273 74 9 chr20 32149773 32149989 -34518016 - MIR SINE MIR -31 231 2 228 290 16 0 chr20 32149989 32150020 -34517985 - MIR3 SINE MIR -43 165 134 428 232 65 36 chr20 32150020 32150158 -34517847 + MIR3 SINE MIR 4 145 -63 345 270 56 87 chr20 32151002 32151198 -34516807 + MIR SINE MIR 31 220 -42 1379 126 106 78 chr20 32151248 32151541 -34516464 + AluJo SINE Alu 6 306 -6 520 306 36 73 chr20 32151541 32151760 -34516245 - MIR SINE MIR -12 250 40 1240 258 83 48 chr20 32152019 32152438 -34515567 + L2 LINE L2 2880 3313 0 221 327 79 10 chr20 32152428 32152529 -34515476 - MIR SINE MIR -71 137 30 * 183 296 144 38 chr20 32152897 32153029 -34514976 - MIR SINE MIR -109 153 8 291 333 31 13 chr20 32153079 32153273 -34514732 + MIR SINE MIR 15 256 -6 325 218 11 46 chr20 32153277 32153364 -34514641 + (CACCAT)n Simple_repeat Simple_repeat 4 87 0 935 152 6 0 chr20 32153364 32153542 -34514463 + (CAT)n Simple_repeat Simple_repeat 1 179 0 438 208 19 19 chr20 32153507 32153666 -34514339 + (CACCAT)n Simple_repeat Simple_repeat 4 162 0 * 198 315 9 12 chr20 32154387 32154469 -34513536 - MIR SINE MIR -52 156 72 587 301 184 10 chr20 32154474 32154983 -34513022 - L2 LINE L2 -54 3259 2560 400 272 30 6 chr20 32155206 32155375 -34512630 + L2 LINE L2 3150 3313 0 679 242 101 0 chr20 32155475 32155653 -34512352 - MIR SINE MIR -20 242 47 508 300 12 19 chr20 32156363 32156523 -34511482 - MIR SINE MIR -75 187 29 2046 99 0 74 chr20 32156626 32156973 -34511032 - AluSx SINE Alu 0 312 1 465 306 64 17 chr20 32157640 32157813 -34510192 + MIR SINE MIR 66 246 -16 376 272 194 27 chr20 32157839 32158025 -34509980 - MIR SINE MIR -25 237 30 617 228 15 66 chr20 32158428 32158501 -34509504 - MIR SINE MIR -48 214 139 1587 142 92 21 chr20 32158501 32158783 -34509222 - AluJb SINE Alu -10 302 1 617 228 15 66 chr20 32158783 32158906 -34509099 - MIR SINE MIR -123 139 28 608 142 79 16 chr20 32159076 32159203 -34508802 - MIR SINE MIR -107 155 21 360 301 73 7 chr20 32159493 32159629 -34508376 - MIR SINE MIR -71 191 47 401 302 9 9 chr20 32159747 32159863 -34508142 - MIR SINE MIR -49 213 98 219 227 106 0 chr20 32159879 32159945 -34508060 + MIR SINE MIR 113 185 -77 183 374 28 68 chr20 32160861 32161110 -34506895 + L2 LINE L2 2949 3187 -85 * 1556 271 53 23 chr20 32161096 32161932 -34506073 - L2 LINE L2 -43 3270 2413 219 272 196 0 chr20 32161971 32162063 -34505942 + MIR SINE MIR 28 137 -125 184 260 94 42 chr20 32162463 32162559 -34505446 + MIR SINE MIR 35 135 -73 782 165 8 8 chr20 32163029 32163162 -34504843 + FLAM_A SINE Alu 1 133 0 754 148 0 0 chr20 32163048 32163163 -34504842 + FLAM_A SINE Alu 20 134 -8 364 349 89 7 chr20 32163249 32163395 -34504610 - MIR SINE MIR -6 256 99 296 308 83 0 chr20 32163390 32163533 -34504472 - MIR SINE MIR -1 261 104 * 537 144 0 0 chr20 32163561 32163651 -34504354 + (GGAA)n Simple_repeat Simple_repeat 3 92 0 231 256 70 35 chr20 32163655 32163741 -34504264 - MIR SINE MIR -170 92 4 1281 146 19 9 chr20 32163852 32164064 -34503941 - AluJo SINE Alu -15 297 84 342 300 14 64 chr20 32164175 32164315 -34503690 - MIR3 SINE MIR -63 145 13 270 275 9 18 chr20 32164707 32164816 -34503189 + (CA)n Simple_repeat Simple_repeat 1 108 0 494 281 33 7 chr20 32165611 32165764 -34502241 + MIR SINE MIR 83 239 -23 311 284 39 29 chr20 32166191 32166293 -34501712 + MIR3 SINE MIR 103 205 -3 180 0 0 0 chr20 32167349 32167369 -34500636 + (TG)n Simple_repeat Simple_repeat 2 21 0 22 35 0 0 chr20 32168759 32168788 -34499217 + GC_rich Low_complexity Low_complexity 1 29 0 210 255 10 41 chr20 32168858 32168956 -34499049 + G-rich Low_complexity Low_complexity 4 98 0 23 54 0 0 chr20 32168997 32169034 -34498971 + GC_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr20 32169081 32169109 -34498896 + GC_rich Low_complexity Low_complexity 1 28 0 23 68 0 0 chr20 32169180 32169224 -34498781 + GC_rich Low_complexity Low_complexity 1 44 0 296 266 16 0 chr20 32169477 32169541 -34498464 - MIR SINE MIR -62 146 82 335 287 56 0 chr20 32169657 32169765 -34498240 + L2 LINE L2 3143 3256 -16 185 297 232 0 chr20 32170455 32170583 -34497422 + MIR SINE MIR 79 240 -22 804 320 147 4 chr20 32170651 32171157 -34496848 - L2 LINE L2 -1 3312 2725 1599 141 54 22 chr20 32171596 32171873 -34496132 - AluJb SINE Alu -26 286 1 619 77 0 0 chr20 32171995 32172073 -34495932 - AluJo SINE Alu -234 78 1 296 307 52 33 chr20 32172212 32172365 -34495640 - MIR3 SINE MIR -30 178 23 208 236 55 0 chr20 32172658 32172713 -34495292 + L2 LINE L2 3028 3085 -187 216 0 0 0 chr20 32172861 32172885 -34495120 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 341 252 19 37 chr20 32173020 32173127 -34494878 + MIR SINE MIR 98 202 -60 327 286 107 9 chr20 32173151 32173263 -34494742 - L2 LINE L2 0 3272 3150 1922 133 7 10 chr20 32173286 32173586 -34494419 + AluJo SINE Alu 1 299 -13 2001 125 3 14 chr20 32173630 32173926 -34494079 + AluSx SINE Alu 1 293 -19 861 274 60 18 chr20 32174230 32174511 -34493494 + L2 LINE L2 3021 3313 0 225 0 0 0 chr20 32174525 32174550 -34493455 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 432 0 0 0 chr20 32174549 32174597 -34493408 + (TG)n Simple_repeat Simple_repeat 2 49 0 508 281 68 7 chr20 32174683 32174829 -34493176 + MIR SINE MIR 90 244 -18 233 343 38 19 chr20 32175291 32175396 -34492609 - MIR SINE MIR -145 117 11 189 0 0 0 chr20 32175432 32175453 -34492552 + (A)n Simple_repeat Simple_repeat 1 21 0 2070 103 69 0 chr20 32175455 32175745 -34492260 + AluSx SINE Alu 1 310 -2 1528 142 0 153 chr20 32175763 32176145 -34491860 + AluJo SINE Alu 1 312 0 269 309 63 26 chr20 32176595 32176786 -34491219 + L2 LINE L2 2902 3099 -173 244 331 58 8 chr20 32176846 32176967 -34491038 + MLT1K LTR MaLR 9 135 -453 2342 78 0 0 chr20 32177046 32177339 -34490666 + AluSx SINE Alu 1 293 -19 220 235 20 61 chr20 32177530 32177628 -34490377 + L2 LINE L2 2741 2834 -480 448 124 0 79 chr20 32177689 32177778 -34490227 - Tigger5 DNA MER2_type 0 2323 2242 2105 137 0 0 chr20 32177804 32178110 -34489895 - AluJb SINE Alu -5 307 2 281 226 12 71 chr20 32178112 32178196 -34489809 + Tigger5 DNA MER2_type 2242 2320 -3 * 431 175 0 12 chr20 32178196 32178275 -34489730 - Tigger5 DNA MER2_type -2245 78 1 310 310 30 103 chr20 32178276 32178576 -34489429 + L2 LINE L2 2940 3217 -55 255 119 0 0 chr20 32178707 32178749 -34489256 + MER103 DNA DNA 55 96 -70 434 241 127 32 chr20 32178779 32178937 -34489068 - MIR3 SINE MIR -15 193 21 983 243 4 61 chr20 32178963 32179166 -34488839 + MIR SINE MIR 17 205 -57 2133 103 14 0 chr20 32179166 32179458 -34488547 + AluSx SINE Alu 1 296 -16 983 243 4 61 chr20 32179458 32179501 -34488504 + MIR SINE MIR 205 249 -13 243 240 205 63 chr20 32180276 32180403 -34487602 + MIR SINE MIR 10 153 -62 443 250 30 30 chr20 32180663 32180795 -34487210 + MIR3 SINE MIR 23 154 -54 597 307 57 59 chr20 32180851 32180991 -34487014 + L2 LINE L2 2831 2970 -302 2058 110 3 10 chr20 32180991 32181283 -34486722 - AluSx SINE Alu -22 290 1 597 307 57 59 chr20 32181283 32181582 -34486423 + L2 LINE L2 2970 3269 -3 191 333 60 12 chr20 32182011 32182095 -34485910 - MIR SINE MIR -116 146 59 2449 74 0 0 chr20 32182140 32182451 -34485554 + AluY SINE Alu 1 311 0 1522 162 42 11 chr20 32182465 32182730 -34485275 - AluJo SINE Alu -39 273 1 630 179 0 11 chr20 32182902 32183035 -34484970 + MIR SINE MIR 34 164 -44 302 279 67 78 chr20 32183268 32183312 -34484693 - MIR SINE MIR -68 194 151 2147 118 10 0 chr20 32183312 32183617 -34484388 + AluSx SINE Alu 1 308 -4 302 279 67 78 chr20 32183617 32183751 -34484254 - MIR SINE MIR -111 151 18 427 196 65 9 chr20 32183965 32184072 -34483933 + L2 LINE L2 3160 3272 0 211 243 14 27 chr20 32184113 32184187 -34483818 - MIR SINE MIR -65 143 81 2058 137 0 0 chr20 32184198 32184498 -34483507 - AluSq SINE Alu -13 300 1 246 310 95 35 chr20 32184722 32184838 -34483167 - MIR3 SINE MIR -37 171 49 * 331 337 69 29 chr20 32184811 32185087 -34482918 - L2 LINE L2 -404 2910 2624 1091 242 149 30 chr20 32185088 32185877 -34482128 + L2 LINE L2 2438 3310 -3 380 309 49 10 chr20 32185856 32186030 -34481975 - MIR SINE MIR -59 203 24 * 433 311 25 0 chr20 32186447 32186569 -34481436 + MIR SINE MIR 47 171 -91 259 299 84 79 chr20 32186648 32186726 -34481279 + L2 LINE L2 3030 3106 -166 1844 162 0 23 chr20 32186726 32187035 -34480970 - AluJb SINE Alu 0 312 11 259 299 84 79 chr20 32187035 32187170 -34480835 + L2 LINE L2 3106 3244 -28 211 254 28 42 chr20 32187304 32187375 -34480630 + MIR SINE MIR 93 162 -100 419 246 25 25 chr20 32187663 32187785 -34480220 - MIR3 SINE MIR -82 126 5 193 368 0 0 chr20 32188222 32188290 -34479715 - MIR SINE MIR -81 181 114 472 312 0 0 chr20 32188528 32188653 -34479352 + MIR SINE MIR 67 191 -71 950 295 153 33 chr20 32188700 32189421 -34478584 + L2 LINE L2 1666 2472 -842 351 364 66 63 chr20 32189437 32189863 -34478142 - HAL1 LINE L1 -1203 1304 878 619 109 43 57 chr20 32189863 32190214 -34477791 + (TCTCTG)n Simple_repeat Simple_repeat 1 346 0 544 323 111 13 chr20 32190225 32190905 -34477100 + L2 LINE L2 2471 3272 -41 257 331 33 46 chr20 32191025 32191330 -34476675 + L2 LINE L2 2569 2869 -445 204 265 92 41 chr20 32191488 32191586 -34476419 - L2 LINE L2 -33 3239 3137 409 273 298 11 chr20 32191588 32191870 -34476135 + L2 LINE L2 2951 3313 0 * 523 259 214 14 chr20 32191841 32192130 -34475875 - L2 LINE L2 -123 3190 2844 334 277 51 29 chr20 32192164 32192301 -34475704 - MIR3 SINE MIR -67 141 2 846 295 85 36 chr20 32192603 32193074 -34474931 + L2 LINE L2 2814 3307 -6 465 282 1 43 chr20 32193084 32193238 -34474767 - MIR3 SINE MIR -53 155 5 319 338 78 20 chr20 32194623 32194827 -34473178 - MIR SINE MIR -34 228 13 186 283 94 0 chr20 32194927 32194980 -34473025 - L2 LINE L2 -3 3269 3212 342 322 0 8 chr20 32195132 32195250 -34472755 - MIR SINE MIR -58 150 34 254 398 66 22 chr20 32195918 32196099 -34471906 + MIR3 SINE MIR 19 207 -1 1143 140 0 24 chr20 32196211 32196707 -34471298 + (TGGA)n Simple_repeat Simple_repeat 3 311 0 464 235 0 7 chr20 32196729 32196882 -34471123 + (TGGA)n Simple_repeat Simple_repeat 1 152 0 855 169 0 0 chr20 32196895 32197067 -34470938 + (TGGA)n Simple_repeat Simple_repeat 3 174 0 219 224 0 0 chr20 32197070 32197119 -34470886 + (GCTG)n Simple_repeat Simple_repeat 1 49 0 696 206 0 0 chr20 32197153 32197429 -34470576 + (TGGA)n Simple_repeat Simple_repeat 1 276 0 473 324 120 45 chr20 32197522 32198242 -34469763 + L2 LINE L2 2461 3260 -12 1426 133 0 129 chr20 32198281 32198509 -34469496 - AluJo SINE Alu -54 258 73 2179 120 0 3 chr20 32198509 32198809 -34469196 + AluSx SINE Alu 1 299 -13 1426 133 0 129 chr20 32198809 32198866 -34469139 - AluJo SINE Alu -239 73 10 239 284 15 0 chr20 32198873 32198940 -34469065 + (TGGA)n Simple_repeat Simple_repeat 1 68 0 1797 174 3 0 chr20 32199053 32199357 -34468648 + AluJo SINE Alu 1 305 -7 206 293 28 57 chr20 32199593 32199699 -34468306 + L2 LINE L2 3171 3273 -40 529 279 57 13 chr20 32199732 32199890 -34468115 + L2 LINE L2 2644 2808 -506 891 157 63 0 chr20 32199892 32200083 -34467922 - MER20 DNA MER1_type 0 219 17 422 232 89 36 chr20 32200108 32200276 -34467729 + L2 LINE L2 3041 3217 -96 240 388 0 31 chr20 32200417 32200432 -34467573 - MIR3 SINE MIR -73 135 121 2136 106 0 0 chr20 32200432 32200740 -34467265 + AluSx SINE Alu 1 308 0 240 388 0 31 chr20 32200740 32200852 -34467153 - MIR3 SINE MIR -87 121 11 1813 157 0 28 chr20 32201200 32201519 -34466486 + AluJo SINE Alu 1 310 -2 248 252 58 58 chr20 32201905 32202008 -34465997 - MIR SINE MIR -74 134 32 286 226 0 16 chr20 32202018 32202080 -34465925 + MIR SINE MIR 86 146 -116 995 261 87 27 chr20 32202099 32202123 -34465882 - L2 LINE L2 -12 3301 3280 2261 84 3 3 chr20 32202123 32202422 -34465583 - AluSx SINE Alu -13 299 1 995 261 87 27 chr20 32202422 32202955 -34465050 - L2 LINE L2 -33 3280 2701 1483 219 3 16 chr20 32203000 32203139 -34464866 + AluJo SINE Alu 2 141 -171 2084 102 0 38 chr20 32203139 32203452 -34464553 + AluSx SINE Alu 1 301 -11 1483 219 3 16 chr20 32203452 32203622 -34464383 + AluJo SINE Alu 141 307 -5 307 390 21 7 chr20 32203634 32203775 -34464230 + L1MC4a LINE L1 5854 5996 -1812 229 240 83 0 chr20 32203805 32203901 -34464104 + L1MC4a LINE L1 6070 6173 -1635 208 154 0 26 chr20 32203915 32203954 -34464051 + A-rich Low_complexity Low_complexity 4 41 0 192 165 17 70 chr20 32204032 32204147 -34463858 + G-rich Low_complexity Low_complexity 5 113 0 264 246 0 70 chr20 32204151 32204293 -34463712 + (GGGTG)n Simple_repeat Simple_repeat 4 135 0 268 345 0 33 chr20 32204293 32204456 -34463549 - MIR SINE MIR -65 143 10 212 290 58 0 chr20 32204495 32204564 -34463441 + L2 LINE L2 3200 3272 0 948 237 173 36 chr20 32204578 32204852 -34463153 - L2 LINE L2 0 3313 3078 1577 151 44 7 chr20 32204852 32205124 -34462881 + AluJo SINE Alu 21 302 -10 948 237 173 36 chr20 32205124 32205380 -34462625 - L2 LINE L2 -235 3078 2694 294 301 72 12 chr20 32206103 32206219 -34461786 - MIR SINE MIR -45 163 47 913 114 0 29 chr20 32206219 32206359 -34461646 + AluJb SINE Alu 169 304 -8 386 248 101 8 chr20 32206366 32206495 -34461510 - L2 LINE L2 -315 2998 2858 927 142 12 12 chr20 32207229 32207391 -34460614 - AluSg/x SINE Alu -16 294 133 353 324 122 12 chr20 32207631 32207878 -34460127 + L2 LINE L2 2596 2869 -445 438 268 105 53 chr20 32207887 32208077 -34459928 + MIR SINE MIR 63 262 0 255 321 200 23 chr20 32208129 32208344 -34459661 + L2 LINE L2 2930 3182 -90 207 139 0 0 chr20 32208463 32208499 -34459506 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 1701 148 8 0 chr20 32208592 32208848 -34459157 + AluJb SINE Alu 33 290 -22 198 339 0 0 chr20 32209243 32209302 -34458703 - MIR3 SINE MIR -15 193 135 317 283 80 9 chr20 32209329 32209473 -34458532 - MIR SINE MIR 0 262 109 329 258 21 21 chr20 32209571 32209668 -34458337 + MIR SINE MIR 70 166 -96 1854 112 33 4 chr20 32211351 32211627 -34456378 + AluSx SINE Alu 1 284 -28 495 0 0 0 chr20 32211627 32211682 -34456323 + (CA)n Simple_repeat Simple_repeat 2 56 0 231 172 0 86 chr20 32212232 32212290 -34455715 - MIR SINE MIR -65 143 91 266 228 82 101 chr20 32212562 32212720 -34455285 - MIR3 SINE MIR -36 172 18 224 307 11 34 chr20 32213116 32213204 -34454801 - MIR SINE MIR -79 183 98 282 310 48 7 chr20 32213517 32213662 -34454343 + L1ME4a LINE L1 5731 5881 -1927 1914 142 3 28 chr20 32213671 32213988 -34454017 + AluJb SINE Alu 1 309 -3 231 114 0 0 chr20 32213988 32214023 -34453982 + (GGGA)n Simple_repeat Simple_repeat 1 35 0 2280 110 0 0 chr20 32214037 32214347 -34453658 + AluSx SINE Alu 3 312 0 274 267 57 29 chr20 32215558 32215663 -34452342 - L1MC4a LINE L1 -1915 5893 5786 213 340 106 0 chr20 32215708 32215802 -34452203 - MIR SINE MIR -41 221 118 2183 111 68 14 chr20 32215809 32216162 -34451843 - THE1C LTR MaLR -3 372 1 277 173 358 0 chr20 32216162 32216243 -34451762 + MER81 DNA DNA 5 114 0 314 192 313 0 chr20 32216595 32216694 -34451311 - MIR SINE MIR -108 154 25 183 312 150 40 chr20 32217200 32217373 -34450632 - L2 LINE L2 -183 3089 2898 252 270 27 27 chr20 32217791 32217902 -34450103 + L1ME4a LINE L1 5941 6051 -70 1913 144 20 0 chr20 32217914 32218212 -34449793 + AluSx SINE Alu 1 304 -8 2053 128 10 3 chr20 32218214 32218520 -34449485 + AluSg SINE Alu 1 308 -2 1325 122 25 0 chr20 32218530 32218727 -34449278 + AluJb SINE Alu 1 202 -110 619 182 27 0 chr20 32219809 32219919 -34448086 - MER81 DNA DNA 0 114 2 2010 127 6 19 chr20 32220124 32220440 -34447565 + AluSx SINE Alu 1 312 0 770 262 129 28 chr20 32220469 32220755 -34447250 + L2 LINE L2 2999 3313 0 517 229 6 6 chr20 32220851 32221030 -34446975 + (TG)n Simple_repeat Simple_repeat 2 180 0 615 234 129 0 chr20 32221206 32221377 -34446628 - MIR SINE MIR 0 262 70 283 177 32 0 chr20 32221425 32221487 -34446518 - MIR SINE MIR -63 145 82 224 319 236 5 chr20 32221894 32222085 -34445920 - MIR SINE MIR -16 246 12 394 251 194 26 chr20 32222370 32222494 -34445511 + MIR SINE MIR 21 123 -139 726 146 0 97 chr20 32222494 32222638 -34445367 + FLAM_A SINE Alu 4 133 0 394 251 194 26 chr20 32222638 32222704 -34445301 + MIR SINE MIR 123 243 -19 250 336 21 35 chr20 32222902 32223045 -34444960 - MIR SINE MIR -15 247 107 289 248 28 18 chr20 32223168 32223277 -34444728 + L1ME4a LINE L1 5975 6084 -37 * 3996 164 23 61 chr20 32223270 32223406 -34444599 - L1MB8 LINE L1 0 6178 6038 2040 118 6 16 chr20 32223406 32223719 -34444286 + AluSx SINE Alu 1 310 -2 3996 164 23 61 chr20 32223719 32224033 -34443972 - L1MB8 LINE L1 -140 6038 5714 1715 137 28 59 chr20 32224033 32224354 -34443651 + AluJo SINE Alu 1 311 -1 3996 164 23 61 chr20 32224354 32224822 -34443183 - L1MB8 LINE L1 -464 5714 5294 1961 137 13 22 chr20 32224822 32225137 -34442868 - AluJb SINE Alu 0 312 1 3996 164 23 61 chr20 32225137 32225166 -34442839 - L1MB8 LINE L1 -884 5294 5265 559 209 0 60 chr20 32225779 32225913 -34442092 + MIR SINE MIR 31 156 -106 725 259 21 16 chr20 32226182 32226371 -34441634 + MIR SINE MIR 27 216 -46 441 0 0 0 chr20 32226622 32226671 -34441334 + (CA)n Simple_repeat Simple_repeat 1 49 0 235 267 93 0 chr20 32226672 32226747 -34441258 - MER103 DNA DNA -81 85 4 2012 112 3 10 chr20 32227162 32227488 -34440517 + AluSx SINE Alu 1 312 0 182 243 0 0 chr20 32227801 32227838 -34440167 - L2 LINE L2 -17 3255 3219 237 257 128 46 chr20 32227865 32227974 -34440031 - MIR SINE MIR -109 153 36 209 247 99 12 chr20 32228758 32228839 -34439166 - MIR SINE MIR -145 117 30 283 349 0 72 chr20 32228854 32229006 -34438999 + MIR SINE MIR 2 142 -120 310 278 151 0 chr20 32229013 32229139 -34438866 + MIR SINE MIR 41 185 -77 1921 124 9 64 chr20 32229172 32229502 -34438503 - AluSx SINE Alu 0 312 1 2283 98 0 0 chr20 32230109 32230414 -34437591 + AluSq SINE Alu 1 305 -8 1758 168 0 3 chr20 32230423 32230714 -34437291 + AluJo SINE Alu 6 295 -17 226 244 81 23 chr20 32231077 32231163 -34436842 - MIR3 SINE MIR -107 101 11 257 297 196 0 chr20 32231199 32231418 -34436587 + L2 LINE L2 2885 3146 -167 2258 90 0 37 chr20 32231425 32231748 -34436257 - AluY SINE Alu 0 311 1 670 205 32 53 chr20 32231748 32231938 -34436067 - L1MD3 LINE L1 -6 7989 7804 1305 175 5 0 chr20 32232163 32232386 -34435619 + AluJb SINE Alu 85 308 -4 325 288 129 14 chr20 32232395 32232534 -34435471 - MIR SINE MIR -59 203 49 1359 180 12 50 chr20 32234050 32234373 -34433632 + AluJo SINE Alu 1 311 -1 406 321 6 30 chr20 32234477 32234645 -34433360 + MIR SINE MIR 63 226 -36 207 275 38 12 chr20 32234760 32234840 -34433165 - MIR SINE MIR -131 131 50 220 368 38 8 chr20 32234878 32235011 -34432994 - L2 LINE L2 -17 3296 3160 1899 124 25 45 chr20 32235031 32235345 -34432660 + AluSx SINE Alu 1 308 -4 357 301 113 0 chr20 32236160 32236293 -34431712 - MIR3 SINE MIR -12 196 49 4773 148 58 80 chr20 32236587 32236807 -34431198 + L1MB8 LINE L1 4018 4241 -1937 1871 145 38 0 chr20 32236807 32237097 -34430908 + AluSx SINE Alu 1 301 -11 4773 148 58 80 chr20 32237097 32237557 -34430448 + L1MB8 LINE L1 4241 4710 -1468 1908 165 0 3 chr20 32237557 32237860 -34430145 + AluJb SINE Alu 1 302 -10 4773 148 58 80 chr20 32237860 32238289 -34429716 + L1MB8 LINE L1 4710 5147 -1031 475 121 0 0 chr20 32238289 32238355 -34429650 + AluJ/FLAM SINE Alu 4 69 -243 4773 148 58 80 chr20 32238355 32238508 -34429497 + L1MB8 LINE L1 5147 5302 -876 2126 108 3 10 chr20 32238508 32238814 -34429191 + AluSx SINE Alu 1 304 -8 2464 145 68 2 chr20 32238820 32239219 -34428786 + MSTB LTR MaLR 2 426 0 4773 148 58 80 chr20 32239219 32239576 -34428429 + L1MB8 LINE L1 5307 5679 -499 1908 136 0 7 chr20 32239576 32239870 -34428135 + AluSx SINE Alu 1 292 -20 4773 148 58 80 chr20 32239870 32240061 -34427944 + L1MB8 LINE L1 5679 5873 -305 917 157 0 0 chr20 32240063 32240203 -34427802 + AluJo SINE Alu 1 140 -172 2014 119 0 0 chr20 32240204 32240515 -34427490 + AluSx SINE Alu 1 311 0 416 96 0 55 chr20 32240515 32240588 -34427417 + FLAM_C SINE Alu 73 141 -2 1974 141 0 25 chr20 32240674 32240994 -34427011 + AluSx SINE Alu 1 312 0 1072 79 7 0 chr20 32241052 32241192 -34426813 + AluSq/x SINE Alu 1 141 -172 1583 143 57 14 chr20 32241305 32241585 -34426420 - AluJo SINE Alu -16 296 5 2266 100 0 3 chr20 32241872 32242173 -34425832 - AluSp SINE Alu -13 300 1 395 373 0 6 chr20 32242392 32242553 -34425452 - MIR SINE MIR -15 247 88 266 277 76 3 chr20 32242663 32242784 -34425221 - MIR SINE MIR -61 147 7 203 169 0 51 chr20 32242843 32242902 -34425103 + (TAA)n Simple_repeat Simple_repeat 1 56 0 198 0 0 0 chr20 32242920 32242942 -34425063 + (CAT)n Simple_repeat Simple_repeat 1 22 0 352 286 163 0 chr20 32243491 32243638 -34424367 - MIR SINE MIR -19 243 73 2781 104 3 3 chr20 32243680 32244055 -34423950 - THE1C LTR MaLR 0 375 1 318 265 61 75 chr20 32244195 32244342 -34423663 - L2 LINE L2 -1 3271 3127 216 330 47 28 chr20 32244359 32244465 -34423540 - L2 LINE L2 -18 3295 3188 341 82 41 0 chr20 32245240 32245289 -34422716 + MER66A LTR ERV1 284 334 -144 1961 117 17 10 chr20 32245313 32245613 -34422392 + AluSq SINE Alu 1 302 -11 965 189 6 0 chr20 32245733 32245908 -34422097 + FRAM SINE Alu 1 176 0 2122 108 0 3 chr20 32245949 32246244 -34421761 - AluSg SINE Alu -16 294 1 735 230 120 27 chr20 32246354 32246654 -34421351 + L1ME4a LINE L1 5793 6120 -1 294 291 97 0 chr20 32247501 32247604 -34420401 - L3 LINE CR1 -604 973 861 228 191 0 143 chr20 32248586 32248670 -34419335 - Charlie5 DNA MER1_type 0 2624 2553 1638 114 103 0 chr20 32248680 32248953 -34419052 + AluSg SINE Alu 1 301 -9 1130 122 0 71 chr20 32248977 32249173 -34418832 + AluJb SINE Alu 131 312 0 1957 153 7 0 chr20 32249183 32249478 -34418527 + AluJb SINE Alu 1 297 -15 2240 106 0 0 chr20 32249480 32249782 -34418223 + AluY SINE Alu 3 304 -7 252 0 0 0 chr20 32249794 32249822 -34418183 + (TA)n Simple_repeat Simple_repeat 1 28 0 772 104 96 0 chr20 32249823 32249938 -34418067 - FLAM_C SINE Alu -10 133 8 817 192 127 5 chr20 32249945 32250150 -34417855 - MER33 DNA MER1_type -259 65 1 267 268 226 24 chr20 32250151 32250315 -34417690 - L2 LINE L2 -445 2869 2673 2044 116 3 0 chr20 32250672 32250965 -34417040 - AluY SINE Alu -17 294 1 577 316 58 5 chr20 32250984 32251190 -34416815 + MIR SINE MIR 2 218 -44 254 372 28 0 chr20 32251216 32251341 -34416664 - MIR SINE MIR -75 133 31 2341 91 0 0 chr20 32251344 32251652 -34416353 + AluSx SINE Alu 5 312 0 905 102 38 57 chr20 32251656 32251838 -34416167 + AluSg/x SINE Alu 127 305 0 312 280 61 23 chr20 32252081 32252213 -34415792 + MIR3 SINE MIR 1 137 -71 4159 143 39 61 chr20 32252573 32252916 -34415089 + L1MB1 LINE L1 4905 5254 -914 1962 96 7 33 chr20 32252916 32253217 -34414788 + AluSq SINE Alu 1 293 -20 2304 89 0 6 chr20 32253219 32253532 -34414473 + AluSx SINE Alu 1 311 -1 4159 143 39 61 chr20 32253532 32253548 -34414457 + L1MB1 LINE L1 5255 5270 -898 2073 123 27 0 chr20 32253548 32253849 -34414156 + AluSg SINE Alu 1 309 -1 4159 143 39 61 chr20 32253849 32254557 -34413448 + L1MB1 LINE L1 5270 5958 -210 2323 79 13 0 chr20 32254557 32254861 -34413144 + AluSp SINE Alu 1 308 -5 4159 143 39 61 chr20 32254861 32255032 -34412973 + L1MB1 LINE L1 5958 6131 -37 1835 98 3 78 chr20 32255032 32255361 -34412644 + AluSg SINE Alu 1 306 0 224 57 0 29 chr20 32255381 32255416 -34412589 + (CATA)n Simple_repeat Simple_repeat 3 36 0 1035 177 0 0 chr20 32255419 32255583 -34412422 + FRAM SINE Alu 1 160 -16 226 287 33 74 chr20 32256705 32256827 -34411178 + L2 LINE L2 3155 3271 -1 879 108 0 43 chr20 32257072 32257211 -34410794 - FLAM_C SINE Alu 0 133 1 245 309 32 41 chr20 32257299 32257422 -34410583 + L1ME LINE L1 5541 5662 -459 1731 140 13 42 chr20 32257637 32257944 -34410061 - AluJb SINE Alu -14 298 1 333 0 0 0 chr20 32259121 32259158 -34408847 + (CA)n Simple_repeat Simple_repeat 2 38 0 250 146 0 21 chr20 32259454 32259502 -34408503 - L2 LINE L2 0 3313 3267 250 269 45 0 chr20 32259603 32259670 -34408335 - L2 LINE L2 -218 3054 2985 202 279 49 0 chr20 32259774 32259835 -34408170 - MIR SINE MIR -71 137 74 2235 93 0 7 chr20 32259936 32260238 -34407767 - AluSq SINE Alu -13 300 1 877 86 29 72 chr20 32261225 32261388 -34406617 + FLAM_C SINE Alu 1 157 0 2210 103 0 0 chr20 32261390 32261690 -34406315 + AluSq SINE Alu 1 300 -13 2217 100 0 3 chr20 32261692 32261992 -34406013 + AluSx SINE Alu 1 299 -13 342 275 148 22 chr20 32262183 32262365 -34405640 - MIR SINE MIR -45 217 13 221 333 0 0 chr20 32262859 32262928 -34405077 - MIR SINE MIR -103 105 37 200 282 141 86 chr20 32263096 32263146 -34404859 - MIR3 SINE MIR -7 201 155 1750 134 55 21 chr20 32263146 32263436 -34404569 + AluSg SINE Alu 1 300 -10 200 282 141 86 chr20 32263436 32263548 -34404457 - MIR3 SINE MIR -53 155 30 543 265 65 24 chr20 32263631 32263801 -34404204 + MIR SINE MIR 20 196 -66 237 258 90 11 chr20 32264008 32264097 -34403908 - L2 LINE L2 -260 3053 2958 2496 74 0 7 chr20 32265082 32265391 -34402614 + AluSg SINE Alu 1 307 -3 1136 152 0 0 chr20 32265431 32265596 -34402409 - AluJb SINE Alu -11 301 137 564 276 148 23 chr20 32265677 32265948 -34402057 + L2 LINE L2 2775 3011 -302 2030 125 46 0 chr20 32265948 32266229 -34401776 + AluSg SINE Alu 1 294 -16 564 276 148 23 chr20 32266229 32266242 -34401763 + L2 LINE L2 3011 3021 -292 423 0 0 0 chr20 32266242 32266289 -34401716 + (CA)n Simple_repeat Simple_repeat 2 48 0 564 276 148 23 chr20 32266289 32266478 -34401527 + L2 LINE L2 3021 3311 -2 2267 92 3 26 chr20 32266782 32267085 -34400920 - AluSx SINE Alu -16 296 1 307 236 92 92 chr20 32267273 32267332 -34400673 - MER5B DNA MER1_type -4 174 116 2401 80 0 7 chr20 32267332 32267631 -34400374 + AluSc SINE Alu 5 301 -8 307 236 92 92 chr20 32267631 32267745 -34400260 - MER5B DNA MER1_type -61 117 1 * 338 331 26 32 chr20 32267745 32267894 -34400111 - MER5B DNA MER1_type -18 160 13 1750 149 0 0 chr20 32267902 32268157 -34399848 + AluSx SINE Alu 54 308 -4 2355 75 4 0 chr20 32268213 32268529 -34399476 + AluSx SINE Alu 2 318 0 1098 118 7 13 chr20 32268529 32268734 -34399271 + AluSg/x SINE Alu 131 334 0 507 136 8 59 chr20 32268746 32268844 -34399161 + AluJb SINE Alu 189 290 -22 180 0 0 0 chr20 32268844 32268864 -34399141 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1892 174 3 0 chr20 32268874 32269185 -34398820 + AluJb SINE Alu 1 312 0 1917 173 3 6 chr20 32269198 32269510 -34398495 + AluJb SINE Alu 1 311 -1 281 245 165 42 chr20 32269790 32270002 -34398003 + L1MC5 LINE L1 7546 7783 -178 2690 43 0 0 chr20 32270006 32270306 -34397699 + AluY SINE Alu 1 300 -11 609 190 8 25 chr20 32270322 32270443 -34397562 + FLAM_A SINE Alu 2 120 -13 1671 144 100 0 chr20 32270532 32270803 -34397202 - AluY SINE Alu -13 298 1 1705 193 3 13 chr20 32270825 32270994 -34397011 - AluJo SINE Alu -9 303 137 2353 122 0 0 chr20 32270994 32271298 -34396707 - AluSx SINE Alu -8 304 1 1705 193 3 13 chr20 32271298 32271434 -34396571 - AluJo SINE Alu -175 137 1 1709 143 94 14 chr20 32271504 32271791 -34396214 + AluSg SINE Alu 1 310 0 2515 55 0 0 chr20 32271795 32272085 -34395920 + AluY SINE Alu 1 290 -21 2174 128 3 3 chr20 32272089 32272401 -34395604 + AluSx SINE Alu 1 312 0 363 260 115 0 chr20 32272476 32272580 -34395425 + MER103 DNA DNA 1 116 -50 2315 96 0 6 chr20 32273038 32273350 -34394655 + AluSq SINE Alu 1 310 -3 594 217 17 0 chr20 32273489 32273609 -34394396 + FLAM_A SINE Alu 1 122 -11 403 340 89 15 chr20 32273638 32273841 -34394164 - MIR SINE MIR -37 225 8 2444 92 0 0 chr20 32273887 32274192 -34393813 + AluSq SINE Alu 2 306 -7 1596 147 17 0 chr20 32274201 32274432 -34393573 + AluJo SINE Alu 1 235 -77 652 175 0 17 chr20 32274863 32274983 -34393022 + FLAM_C SINE Alu 1 118 -15 1898 121 0 62 chr20 32275001 32275137 -34392868 + AluSx SINE Alu 1 144 -158 2218 125 0 10 chr20 32275137 32275271 -34392734 + AluSx SINE Alu 2 136 -176 2120 108 0 54 chr20 32275271 32275585 -34392420 + AluSx SINE Alu 1 297 -15 2218 125 0 10 chr20 32275585 32275754 -34392251 + AluSx SINE Alu 136 302 -10 1898 121 0 62 chr20 32275754 32275939 -34392066 + AluSx SINE Alu 144 302 0 2201 103 17 0 chr20 32276117 32276409 -34391596 + AluSx SINE Alu 1 297 -15 2361 64 11 4 chr20 32276414 32276725 -34391280 + AluY SINE Alu 1 313 0 644 52 21 0 chr20 32276754 32276850 -34391155 + (TCTCCC)n Simple_repeat Simple_repeat 1 98 0 6802 59 18 42 chr20 32276850 32278642 -34389363 + SVA Other Other 57 1386 0 228 163 0 23 chr20 32278675 32278718 -34389287 - Alu SINE Alu -198 102 61 438 281 91 23 chr20 32278733 32279040 -34388965 + L1MC4a LINE L1 5689 6017 -104 2564 70 0 0 chr20 32279104 32279405 -34388600 - AluY SINE Alu -10 301 1 1919 151 0 39 chr20 32279458 32279763 -34388242 + AluSx SINE Alu 13 305 -7 2158 102 7 30 chr20 32279786 32280089 -34387916 + AluSg SINE Alu 1 296 -14 2245 128 0 3 chr20 32280099 32280404 -34387601 + AluSq SINE Alu 3 306 -7 1863 150 24 3 chr20 32280628 32280915 -34387090 + AluJo SINE Alu 3 295 -17 2103 118 38 0 chr20 32280944 32281231 -34386774 + AluSc SINE Alu 1 298 -11 406 105 132 0 chr20 32281232 32281308 -34386697 - MER5C DNA MER1_type -171 153 68 333 109 0 0 chr20 32282101 32282156 -34385849 + (CA)n Simple_repeat Simple_repeat 2 56 0 2006 146 19 7 chr20 32282234 32282542 -34385463 - AluJb SINE Alu 0 312 1 815 201 176 80 chr20 32282685 32282836 -34385169 + MLT1A2 LTR MaLR 1 136 -238 2315 117 3 0 chr20 32282836 32283145 -34384860 - AluSx SINE Alu -2 310 1 815 201 176 80 chr20 32283145 32283176 -34384829 + MLT1A2 LTR MaLR 136 163 -211 843 159 0 0 chr20 32283176 32283308 -34384697 + AluJo SINE Alu 1 132 -170 815 201 176 80 chr20 32283308 32283402 -34384603 + MLT1A2 LTR MaLR 163 247 -127 2125 133 0 26 chr20 32283402 32283710 -34384295 + AluSg SINE Alu 1 300 -10 815 201 176 80 chr20 32283710 32283755 -34384250 + MLT1A2 LTR MaLR 247 355 -19 248 133 133 0 chr20 32283762 32283807 -34384198 + MLT1A2 LTR MaLR 315 365 0 2326 98 0 0 chr20 32283950 32284262 -34383743 + AluSx SINE Alu 1 312 0 273 354 139 0 chr20 32284274 32284497 -34383508 + MIR SINE MIR 4 257 -5 965 188 0 0 chr20 32284716 32284729 -34383276 + AluJo SINE Alu 120 132 -180 1831 153 58 10 chr20 32284729 32285024 -34382981 + AluJo SINE Alu 3 311 -1 965 188 0 0 chr20 32285024 32285164 -34382841 + AluJo SINE Alu 131 273 -39 543 299 25 73 chr20 32285544 32285771 -34382234 + L1MC/D LINE L1 5373 5582 -2226 1713 172 0 27 chr20 32285771 32286068 -34381937 - AluJb SINE Alu -23 289 1 543 299 25 73 chr20 32286068 32286154 -34381851 + L1MC/D LINE L1 5582 5671 -2137 624 164 9 17 chr20 32286169 32286285 -34381720 + FLAM_C SINE Alu 8 122 -21 2333 77 0 32 chr20 32286322 32286632 -34381373 + AluY SINE Alu 1 300 -11 2018 103 81 0 chr20 32286632 32286904 -34381101 + AluSx SINE Alu 1 294 -18 2131 107 10 20 chr20 32286976 32287114 -34380891 + AluSx SINE Alu 1 139 -173 2381 87 10 3 chr20 32287114 32287413 -34380592 + AluSx SINE Alu 1 301 -11 2131 107 10 20 chr20 32287413 32287574 -34380431 + AluSx SINE Alu 139 297 -15 2161 99 10 20 chr20 32287574 32287876 -34380129 + AluY SINE Alu 1 299 -12 2386 82 0 0 chr20 32287876 32288168 -34379837 + AluSg1 SINE Alu 7 298 -11 407 222 0 11 chr20 32288233 32288323 -34379682 + AluJo/FLAM SINE Alu 44 132 -180 2104 140 13 0 chr20 32288323 32288630 -34379375 + AluSx SINE Alu 1 311 -1 2035 118 24 3 chr20 32288635 32288922 -34379083 + AluSx SINE Alu 3 295 -17 2123 131 3 0 chr20 32288996 32289294 -34378711 - AluSx SINE Alu -13 299 1 599 162 104 52 chr20 32289339 32289493 -34378512 - FRAM SINE Alu -20 156 1 2187 115 0 3 chr20 32290066 32290384 -34377621 + AluY SINE Alu 1 311 0 1327 173 24 109 chr20 32290438 32290576 -34377429 + AluYb8 SINE Alu 3 151 -167 2287 101 0 7 chr20 32290576 32290872 -34377133 + AluY SINE Alu 1 294 -17 1327 173 24 109 chr20 32290872 32291062 -34376943 + AluYb8 SINE Alu 151 303 -15 851 149 156 19 chr20 32291062 32291216 -34376789 + AluJb SINE Alu 137 311 -1 1745 182 0 29 chr20 32291226 32291533 -34376472 + AluJo SINE Alu 3 300 -12 1731 176 3 26 chr20 32291803 32291984 -34376021 - AluJo SINE Alu -12 300 127 2058 138 14 0 chr20 32291984 32292273 -34375732 + AluSg SINE Alu 1 293 -17 1731 176 3 26 chr20 32292273 32292398 -34375607 - AluJo SINE Alu -185 127 1 1298 179 13 4 chr20 32292408 32292637 -34375368 - AluJo SINE Alu -10 302 72 431 257 181 7 chr20 32292638 32292782 -34375223 + MIR SINE MIR 81 249 -13 279 200 0 0 chr20 32292804 32292859 -34375146 + MIR SINE MIR 100 154 -108 619 205 33 0 chr20 32292863 32292985 -34375020 + AluSq/x SINE Alu 2 127 -185 2398 97 0 0 chr20 32293041 32293351 -34374654 + AluY SINE Alu 1 310 -1 378 159 154 93 chr20 32293371 32293413 -34374592 + MER33 DNA MER1_type 16 54 -2531 1873 156 7 14 chr20 32293413 32293708 -34374297 + AluSx SINE Alu 1 293 -19 2414 88 0 0 chr20 32293713 32294009 -34373996 + AluY SINE Alu 1 296 -15 378 159 154 93 chr20 32294009 32294142 -34373863 + MER33 DNA MER1_type 57 208 -116 464 240 0 10 chr20 32294148 32294244 -34373761 + Tigger3(Golem) DNA MER2_type 18 112 -2917 1311 137 113 14 chr20 32294294 32294506 -34373499 + AluJo SINE Alu 67 299 -13 2247 121 3 0 chr20 32294538 32294843 -34373162 + AluSx SINE Alu 1 306 -6 939 169 0 29 chr20 32294889 32295061 -34372944 - FAM SINE Alu -8 167 1 2165 122 10 3 chr20 32295068 32295362 -34372643 - AluSc SINE Alu -13 296 1 1207 129 83 0 chr20 32295363 32295580 -34372425 + Tigger3(Golem) DNA MER2_type 2740 2974 -55 2321 99 3 0 chr20 32295582 32295875 -34372130 + AluSx SINE Alu 1 294 -18 304 180 56 0 chr20 32295875 32295964 -34372041 + MER33 DNA MER1_type 227 320 -4 26 30 0 0 chr20 32296949 32296982 -34371023 + GC_rich Low_complexity Low_complexity 1 33 0 256 276 38 0 chr20 32297093 32297198 -34370807 + (CCG)n Simple_repeat Simple_repeat 3 111 0 23 68 0 0 chr20 32297261 32297305 -34370700 + GC_rich Low_complexity Low_complexity 1 44 0 347 296 136 23 chr20 32297325 32297501 -34370504 + MIR SINE MIR 67 262 0 226 275 147 9 chr20 32297519 32297628 -34370377 - L2 LINE L2 -4 3309 3186 458 242 76 15 chr20 32297630 32297762 -34370243 - MER5A DNA MER1_type -3 186 47 2439 71 14 0 chr20 32298224 32298520 -34369485 + AluSp SINE Alu 1 300 -13 953 152 7 0 chr20 32298593 32298744 -34369261 + AluJb SINE Alu 147 298 -14 2036 140 0 16 chr20 32299020 32299190 -34368815 - AluSx SINE Alu -10 302 138 2412 76 10 0 chr20 32299190 32299494 -34368511 - AluSp SINE Alu -6 307 1 2036 140 0 16 chr20 32299494 32299630 -34368375 - AluSx SINE Alu -174 138 1 25 0 0 0 chr20 32299633 32299658 -34368347 + AT_rich Low_complexity Low_complexity 1 25 0 2156 125 3 31 chr20 32299680 32300001 -34368004 + AluSx SINE Alu 1 312 0 2604 44 0 0 chr20 32300295 32300591 -34367414 - AluY SINE Alu -15 296 1 388 319 6 60 chr20 32300700 32300770 -34367235 + MER5A DNA MER1_type 9 81 -108 2402 93 0 3 chr20 32300770 32301080 -34366925 + AluSc SINE Alu 1 309 0 388 319 6 60 chr20 32301080 32301101 -34366904 + MER5A DNA MER1_type 81 102 -87 1970 142 0 0 chr20 32301101 32301382 -34366623 + AluSx SINE Alu 28 308 -4 388 319 6 60 chr20 32301382 32301471 -34366534 + MER5A DNA MER1_type 102 180 -9 188 286 36 0 chr20 32301477 32301533 -34366472 - MIR SINE MIR 0 262 205 555 290 67 21 chr20 32301689 32301882 -34366123 + MIR SINE MIR 61 262 0 317 232 30 20 chr20 32301886 32301985 -34366020 - L1ME LINE L1 -386 5735 5636 2534 81 0 3 chr20 32302094 32302403 -34365602 + AluSp SINE Alu 1 308 -5 2447 109 0 0 chr20 32302434 32302747 -34365258 + AluSq SINE Alu 1 313 0 2263 126 0 0 chr20 32302753 32303062 -34364943 + AluSg SINE Alu 1 309 -1 746 96 0 8 chr20 32303062 32303181 -34364824 + L1MA4A LINE L1 6176 6293 -10 1022 157 66 0 chr20 32303963 32304161 -34363844 - L1MD1 LINE L1 0 6242 6032 2396 98 0 0 chr20 32304255 32304560 -34363445 + AluSq SINE Alu 1 305 -8 323 242 115 51 chr20 32304578 32304735 -34363270 + L1MC4 LINE L1 7537 7703 -339 341 140 0 0 chr20 32304738 32304795 -34363210 + L1MB2 LINE L1 6076 6132 -39 487 229 37 0 chr20 32304803 32304912 -34363093 + FLAM_A SINE Alu 21 133 -9 617 187 134 11 chr20 32304959 32305146 -34362859 + L1MC4 LINE L1 7694 7903 -139 510 307 0 29 chr20 32305790 32305927 -34362078 - L2 LINE L2 -1 3312 3180 185 271 0 34 chr20 32306346 32306405 -34361600 - L2 LINE L2 -818 2496 2440 359 306 9 0 chr20 32306426 32306534 -34361471 - MIR SINE MIR -62 146 38 2364 112 0 0 chr20 32306756 32307068 -34360937 + AluSx SINE Alu 1 312 0 760 163 23 0 chr20 32307464 32307593 -34360412 - FLAM_C SINE Alu 0 133 2 244 320 20 27 chr20 32307712 32307862 -34360143 + L2 LINE L2 2829 2977 -336 1198 123 12 0 chr20 32307922 32308093 -34359912 - AluSg/x SINE Alu -4 306 134 1949 98 16 0 chr20 32308095 32308349 -34359656 - AluSx SINE Alu -17 295 38 2345 103 3 0 chr20 32308454 32308756 -34359249 + AluSg SINE Alu 1 303 -7 296 250 125 39 chr20 32308800 32308928 -34359077 + L2 LINE L2 3134 3272 0 2246 117 3 0 chr20 32308939 32309238 -34358767 + AluSp SINE Alu 1 300 -13 440 284 21 21 chr20 32309343 32309484 -34358521 + MIR SINE MIR 112 252 -10 1826 101 89 4 chr20 32309517 32309810 -34358195 + AluSg SINE Alu 1 315 0 185 338 0 42 chr20 32310020 32310091 -34357914 - MIR SINE MIR -56 206 139 402 232 52 97 chr20 32310130 32310285 -34357720 + MIR3 SINE MIR 13 160 -48 2210 92 0 17 chr20 32310448 32310743 -34357262 + AluSc SINE Alu 1 290 -19 512 231 45 26 chr20 32310766 32310888 -34357117 - MIR SINE MIR -5 257 130 1871 138 0 14 chr20 32310888 32311171 -34356834 + AluSx SINE Alu 34 312 0 512 231 45 26 chr20 32311171 32311204 -34356801 - MIR SINE MIR -132 130 99 259 275 0 0 chr20 32311214 32311283 -34356722 - MIR SINE MIR 0 262 194 732 177 0 8 chr20 32311442 32311572 -34356433 - FLAM_C SINE Alu -4 129 1 596 262 20 36 chr20 32311593 32311783 -34356222 - L1MC4 LINE L1 0 8042 7855 1790 157 23 17 chr20 32311783 32312083 -34355922 - AluJb SINE Alu -10 302 1 596 262 20 36 chr20 32312083 32312140 -34355865 - L1MC4 LINE L1 -187 7855 7799 2385 66 0 30 chr20 32312254 32312556 -34355449 - AluY SINE Alu -18 293 1 212 278 53 60 chr20 32312620 32312753 -34355252 + MIR SINE MIR 74 205 -57 1941 118 27 0 chr20 32312796 32312897 -34355108 + AluSg SINE Alu 21 118 -192 207 0 0 0 chr20 32312897 32312920 -34355085 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1941 118 27 0 chr20 32312920 32313081 -34354924 + AluSg SINE Alu 118 290 -20 2465 74 0 3 chr20 32313101 32313399 -34354606 + AluY SINE Alu 1 297 -14 2401 91 0 3 chr20 32313694 32314003 -34354002 - AluSg SINE Alu -2 308 1 2103 94 22 4 chr20 32314052 32314368 -34353637 + AluSx SINE Alu 1 321 0 606 330 156 13 chr20 32314729 32314827 -34353178 - L2 LINE L2 -3 3310 3227 450 0 0 0 chr20 32314827 32314877 -34353128 + (TG)n Simple_repeat Simple_repeat 2 51 0 606 330 156 13 chr20 32314877 32315234 -34352771 - L2 LINE L2 -86 3227 2785 235 81 0 0 chr20 32315237 32315274 -34352731 - L2 LINE L2 0 3313 3277 189 74 0 0 chr20 32315498 32315525 -34352480 + (TCCCC)n Simple_repeat Simple_repeat 4 30 0 21 57 0 0 chr20 32315935 32315970 -34352035 + GC_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr20 32315982 32316014 -34351991 + GC_rich Low_complexity Low_complexity 1 32 0 199 231 0 0 chr20 32317732 32317771 -34350234 + MIR SINE MIR 224 262 0 266 227 113 10 chr20 32317861 32317958 -34350047 + MIR SINE MIR 96 202 -60 2267 118 10 0 chr20 32319091 32319396 -34348609 - AluSx SINE Alu -4 308 1 2541 67 0 6 chr20 32319400 32319733 -34348272 - AluY SINE Alu 0 331 1 1707 157 15 0 chr20 32319745 32320019 -34347986 + AluSx SINE Alu 5 282 -30 654 225 8 0 chr20 32320056 32320185 -34347820 - FLAM_C SINE Alu -3 130 1 1583 162 64 0 chr20 32320256 32320550 -34347455 - AluJb SINE Alu 0 315 5 2131 108 13 29 chr20 32320558 32320872 -34347133 - AluSp SINE Alu -4 309 1 1766 153 16 26 chr20 32321102 32321410 -34346595 - AluJo SINE Alu -7 305 1 1575 141 65 30 chr20 32321722 32321863 -34346142 - AluJo SINE Alu -40 272 137 2308 98 13 0 chr20 32321863 32322168 -34345837 - AluSp SINE Alu -4 309 1 1575 141 65 30 chr20 32322168 32322289 -34345716 - AluJo SINE Alu -175 137 1 2496 54 0 10 chr20 32322765 32323063 -34344942 - AluY SINE Alu -16 295 1 399 145 0 0 chr20 32323366 32323428 -34344577 - L1ME1 LINE L1 -200 5966 5905 577 163 10 0 chr20 32323428 32323526 -34344479 - AluSg/x SINE Alu -16 293 195 352 287 10 0 chr20 32323527 32323628 -34344377 - L1ME1 LINE L1 -251 5915 5814 459 201 121 60 chr20 32323641 32323790 -34344215 - FRAM SINE Alu -24 152 1 1744 156 14 34 chr20 32323799 32323956 -34344049 - AluJo SINE Alu -22 290 131 2167 104 0 61 chr20 32323956 32324283 -34343722 - AluSp SINE Alu -6 307 1 2397 93 10 0 chr20 32324287 32324588 -34343417 - AluSp SINE Alu -9 304 1 1744 156 14 34 chr20 32324588 32324720 -34343285 - AluJo SINE Alu -184 128 2 2245 102 24 7 chr20 32325035 32325330 -34342675 + AluSx SINE Alu 1 300 -12 501 45 0 0 chr20 32326551 32326617 -34341388 - AluSp SINE Alu -12 301 236 1413 67 11 6 chr20 32326617 32326795 -34341210 - AluSp SINE Alu -134 179 1 1007 114 66 36 chr20 32326795 32326960 -34341045 - AluSg/x SINE Alu -18 294 125 1276 196 19 79 chr20 32327289 32327606 -34340399 - AluJo SINE Alu -13 299 2 234 0 0 0 chr20 32327611 32327637 -34340368 + (T)n Simple_repeat Simple_repeat 1 26 0 2467 80 0 0 chr20 32327885 32328185 -34339820 - AluY SINE Alu -11 300 1 663 256 6 6 chr20 32328192 32328368 -34339637 - L1PB4 LINE L1 0 6156 5981 234 0 0 0 chr20 32328370 32328396 -34339609 + (TCTTG)n Simple_repeat Simple_repeat 2 27 0 2163 99 7 17 chr20 32328396 32328698 -34339307 - AluSq SINE Alu -14 299 1 1092 96 0 0 chr20 32328698 32328834 -34339171 - AluSq/x SINE Alu -176 136 1 2255 86 52 0 chr20 32329634 32329924 -34338081 + AluSx SINE Alu 1 305 -7 463 194 134 15 chr20 32330280 32330414 -34337591 + MIR SINE MIR 110 259 -3 2200 76 3 92 chr20 32331733 32332061 -34335944 + AluSc SINE Alu 1 299 -10 1191 170 117 5 chr20 32332392 32332615 -34335390 + AluJo SINE Alu 38 285 -27 366 80 0 0 chr20 32332615 32332665 -34335340 + (TGGA)n Simple_repeat Simple_repeat 3 52 0 198 265 84 36 chr20 32332986 32333069 -34334936 + MIR SINE MIR 54 140 -122 345 308 75 0 chr20 32334599 32334719 -34333286 + MER3 DNA MER1_type 3 131 -78 5543 143 50 19 chr20 32335284 32336261 -34331744 + Tigger7 DNA MER2_type 3 1009 -1478 1359 115 74 4 chr20 32336259 32336503 -34331502 + Tigger7 DNA MER2_type 2327 2587 0 * 2018 135 20 13 chr20 32336600 32336903 -34331102 - AluSx SINE Alu -7 305 1 2017 113 19 56 chr20 32337392 32337577 -34330428 - AluSx SINE Alu -3 309 139 2101 117 0 20 chr20 32337577 32337876 -34330129 - AluSq SINE Alu -3 310 18 2017 113 19 56 chr20 32337876 32338010 -34329995 - AluSx SINE Alu -173 139 2 193 185 93 0 chr20 32338043 32338097 -34329908 - MIR SINE MIR -93 169 111 2198 129 0 10 chr20 32338706 32339016 -34328989 - AluSx SINE Alu -5 307 1 2094 149 0 13 chr20 32339548 32339864 -34328141 - AluSx SINE Alu 0 312 1 3129 66 2 49 chr20 32341415 32341885 -34326120 - LTR7 LTR ERV1 -2 448 1 231 157 0 59 chr20 32342141 32342192 -34325813 - Alu SINE Alu -168 134 87 1412 161 0 9 chr20 32342192 32342415 -34325590 - AluJo SINE Alu -91 221 1 2126 99 7 3 chr20 32343286 32343568 -34324437 - AluSx SINE Alu -29 283 1 1511 196 35 0 chr20 32344353 32344638 -34323367 - AluJo SINE Alu -17 295 1 1533 150 105 8 chr20 32346888 32347155 -34320850 + AluSx SINE Alu 1 293 -19 301 152 0 0 chr20 32347715 32347761 -34320244 + AluJb SINE Alu 2 47 -254 1522 165 64 4 chr20 32347781 32348048 -34319957 + AluJb SINE Alu 29 311 -1 410 209 65 78 chr20 32348055 32348076 -34319929 - MER33 DNA MER1_type -2329 295 275 1704 128 70 4 chr20 32348076 32348334 -34319671 + AluSq SINE Alu 1 275 -38 410 209 65 78 chr20 32348334 32348542 -34319463 - MER33 DNA MER1_type -2349 275 69 1275 221 35 18 chr20 32351183 32351336 -34316669 - AluJo SINE Alu -22 290 128 2044 127 0 51 chr20 32351336 32351652 -34316353 - AluSx SINE Alu -12 300 1 1275 221 35 18 chr20 32351652 32351783 -34316222 - AluJo SINE Alu -184 128 1 1977 158 7 0 chr20 32353194 32353492 -34314513 - AluSx SINE Alu -10 302 3 1734 120 28 12 chr20 32354181 32354431 -34313574 - AluSq SINE Alu -59 254 1 1749 162 21 21 chr20 32355271 32355561 -34312444 - AluJo SINE Alu -22 290 1 454 169 0 0 chr20 32355717 32355788 -34312217 + AluJ/FLAM SINE Alu 3 73 -239 977 83 0 0 chr20 32356394 32356527 -34311478 + FLAM_C SINE Alu 1 133 0 217 270 101 22 chr20 32357759 32357848 -34310157 - L2 LINE L2 -752 2562 2467 806 143 41 41 chr20 32358361 32358508 -34309497 - FRAM SINE Alu -5 171 25 355 275 80 14 chr20 32358630 32358768 -34309237 - MIR3 SINE MIR -48 160 14 347 318 132 5 chr20 32360442 32360662 -34307343 - L1M4 LINE L1 -3009 3137 2890 181 306 0 32 chr20 32361174 32361236 -34306769 - L2 LINE L2 0 3272 3213 526 158 119 0 chr20 32363214 32363315 -34304690 + AluJb SINE Alu 13 125 -187 2068 94 59 7 chr20 32363330 32363617 -34304388 + AluY SINE Alu 1 302 -9 241 257 14 0 chr20 32363621 32363691 -34304314 - MER5A DNA MER1_type -21 168 98 582 193 9 0 chr20 32363720 32363829 -34304176 - AluJb SINE Alu -66 246 137 1441 127 0 23 chr20 32365148 32365369 -34302636 + AluSg/x SINE Alu 79 294 -16 289 220 150 20 chr20 32365373 32365473 -34302532 + MIR SINE MIR 136 248 -14 1573 156 17 35 chr20 32365600 32365888 -34302117 + AluJb SINE Alu 1 283 -29 412 296 174 6 chr20 32366050 32366222 -34301783 + MIR SINE MIR 50 250 -12 247 302 102 20 chr20 32366274 32366425 -34301580 - MIR SINE MIR -69 139 11 254 246 0 15 chr20 32366498 32366563 -34301442 + CT-rich Low_complexity Low_complexity 3 66 0 261 85 21 0 chr20 32366573 32366620 -34301385 - Alu SINE Alu -2 298 251 2256 62 3 7 chr20 32366581 32366873 -34301132 - AluY SINE Alu -20 291 1 2442 50 3 0 chr20 32366930 32367228 -34300777 + AluY SINE Alu 2 300 -11 944 169 30 0 chr20 32367245 32367411 -34300594 + AluJo SINE Alu 120 290 -22 618 187 8 15 chr20 32367425 32367559 -34300446 - L1MC4 LINE L1 -14 8028 7896 1732 101 0 0 chr20 32367559 32367796 -34300209 - AluSq SINE Alu -76 237 1 1054 67 0 8 chr20 32367800 32367934 -34300071 - AluSp SINE Alu -180 133 1 321 239 223 23 chr20 32368112 32368242 -34299763 + L2 LINE L2 2927 3082 -190 2099 125 3 0 chr20 32368283 32368587 -34299418 + AluSq SINE Alu 1 305 -8 1957 134 10 7 chr20 32368589 32368896 -34299109 + AluSx SINE Alu 1 308 -4 1305 157 139 8 chr20 32368938 32369205 -34298800 - AluJb SINE Alu 0 302 1 205 303 144 15 chr20 32369668 32369720 -34298285 + L2 LINE L2 2742 2786 -528 2116 88 0 33 chr20 32369720 32370025 -34297980 - AluSx SINE Alu -17 295 1 205 303 144 15 chr20 32370025 32370104 -34297901 + L2 LINE L2 2786 2890 -424 285 222 56 0 chr20 32370174 32370246 -34297759 - MIR SINE MIR -11 251 176 2037 93 0 0 chr20 32370329 32370597 -34297408 + AluSg SINE Alu 1 268 -42 24 32 0 0 chr20 32370611 32370642 -34297363 + AT_rich Low_complexity Low_complexity 1 31 0 2108 123 0 0 chr20 32370791 32371101 -34296904 - AluSg SINE Alu 0 310 1 2198 105 0 0 chr20 32371129 32371425 -34296580 - AluSg SINE Alu -14 296 1 929 156 0 6 chr20 32371846 32372006 -34295999 - FRAM SINE Alu -11 165 7 244 258 0 17 chr20 32372121 32372187 -34295818 + MIR SINE MIR 86 151 -57 1712 100 0 0 chr20 32372214 32372443 -34295562 - AluSq SINE Alu -84 229 1 909 106 8 0 chr20 32372482 32372614 -34295391 + FLAM_C SINE Alu 1 133 0 2283 87 0 0 chr20 32372812 32373111 -34294894 - AluSx SINE Alu -13 299 1 896 87 0 51 chr20 32373201 32373339 -34294666 + FLAM_C SINE Alu 3 133 0 21 0 0 0 chr20 32373610 32373631 -34294374 + GC_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chr20 32373717 32373753 -34294252 + GC_rich Low_complexity Low_complexity 1 36 0 21 57 0 0 chr20 32373856 32373891 -34294114 + GC_rich Low_complexity Low_complexity 1 35 0 442 271 132 0 chr20 32374084 32374228 -34293777 + MIR SINE MIR 4 166 -96 268 344 78 23 chr20 32374277 32374405 -34293600 - L2 LINE L2 -2 3311 3177 422 303 142 32 chr20 32374605 32374689 -34293316 - MIR SINE MIR -18 244 171 2072 93 26 3 chr20 32374689 32374991 -34293014 - AluSx SINE Alu -2 310 2 422 303 142 32 chr20 32374991 32375124 -34292881 - MIR SINE MIR -91 171 3 471 231 77 21 chr20 32375225 32375368 -34292637 - MIR SINE MIR -31 231 81 306 312 156 14 chr20 32376022 32376163 -34291842 - L2 LINE L2 -565 2749 2589 192 315 74 0 chr20 32376174 32376228 -34291777 - L2 LINE L2 -46 3267 3210 427 310 86 11 chr20 32376268 32376442 -34291563 - MIR SINE MIR -48 214 28 222 320 30 30 chr20 32376738 32376838 -34291167 - L2 LINE L2 -15 3257 3158 * 286 280 131 0 chr20 32376805 32376912 -34291093 + MIR3 SINE MIR 88 208 0 253 214 57 132 chr20 32377189 32377305 -34290700 + L2 LINE L2 2640 2742 -572 1428 170 74 0 chr20 32377305 32377575 -34290430 + AluJb SINE Alu 3 292 -20 253 214 57 132 chr20 32377575 32377617 -34290388 + L2 LINE L2 2742 2786 -528 558 286 228 19 chr20 32377619 32377944 -34290061 + L2 LINE L2 2919 3311 -2 194 147 35 48 chr20 32378084 32378142 -34289863 + MIR SINE MIR 92 191 -61 582 195 127 0 chr20 32378358 32378476 -34289529 - FLAM_C SINE Alu 0 133 1 2250 104 7 0 chr20 32378546 32378854 -34289151 + AluSx SINE Alu 1 310 -2 2046 94 22 4 chr20 32379189 32379496 -34288509 + AluSx SINE Alu 1 312 0 2290 66 7 13 chr20 32379891 32380196 -34287809 - AluY SINE Alu -8 303 1 1951 115 41 7 chr20 32380196 32380491 -34287514 - AluSx SINE Alu -5 307 3 2178 88 0 7 chr20 32380805 32381099 -34286906 + AluSq SINE Alu 6 297 -16 2232 82 3 3 chr20 32381291 32381585 -34286420 + AluSg SINE Alu 1 294 -16 228 228 222 4 chr20 32382151 32382263 -34285742 + MIR SINE MIR 3 146 -62 198 98 0 146 chr20 32382379 32382420 -34285585 - MIR SINE MIR -115 147 113 1887 81 88 0 chr20 32382613 32382886 -34285119 - AluSg SINE Alu -11 299 3 2162 49 46 3 chr20 32384416 32384700 -34283305 - AluY SINE Alu -15 296 1 874 167 8 0 chr20 32384839 32384971 -34283034 + FLAM_C SINE Alu 1 133 0 2053 114 0 19 chr20 32385203 32385511 -34282494 - AluSx SINE Alu -10 302 1 1863 136 20 3 chr20 32386143 32386438 -34281567 - AluJb SINE Alu -12 300 1 216 0 0 0 chr20 32386484 32386508 -34281497 + (T)n Simple_repeat Simple_repeat 1 24 0 818 114 0 0 chr20 32386528 32386642 -34281363 + AluSc SINE Alu 189 302 -7 1047 139 21 16 chr20 32386708 32386895 -34281110 + AluJb SINE Alu 114 301 -11 401 113 16 16 chr20 32387915 32387977 -34280028 + AluJ/FLAM SINE Alu 1 62 -240 370 240 113 98 chr20 32388436 32388640 -34279365 - L1MC5 LINE L1 -32 7929 7723 919 184 0 0 chr20 32388754 32388917 -34279088 + FRAM SINE Alu 1 162 -14 436 211 117 16 chr20 32389029 32389157 -34278848 - FLAM_A SINE Alu -1 141 1 2397 90 0 0 chr20 32389272 32389582 -34278423 - AluSx SINE Alu -2 310 1 1492 170 57 7 chr20 32389639 32389922 -34278083 - AluSg SINE Alu -13 297 1 386 263 143 23 chr20 32390636 32390811 -34277194 + MIR SINE MIR 9 204 -58 2827 173 37 74 chr20 32391318 32391478 -34276527 - L1MB8 LINE L1 0 6178 6014 2047 119 3 3 chr20 32391478 32391780 -34276225 + AluSx SINE Alu 2 303 -9 2827 173 37 74 chr20 32391780 32392349 -34275656 - L1MB8 LINE L1 -164 6014 5476 30 45 0 0 chr20 32394139 32394183 -34273822 + AT_rich Low_complexity Low_complexity 1 44 0 789 154 0 0 chr20 32394183 32394300 -34273705 - FLAM_C SINE Alu -15 118 2 2275 88 7 0 chr20 32394484 32394790 -34273215 - AluSx SINE Alu -4 308 1 1875 56 4 4 chr20 32395147 32395381 -34272624 - L1PA3 LINE L1 -5 6150 5917 273 319 157 6 chr20 32395429 32395595 -34272410 + MIR SINE MIR 65 255 -7 2109 92 0 0 chr20 32395741 32396061 -34271944 - AluY SINE Alu 0 320 1 341 230 435 6 chr20 32396061 32396222 -34271783 - MIR SINE MIR -4 258 29 234 0 0 0 chr20 32396810 32396836 -34271169 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1021 213 53 38 chr20 32397115 32397434 -34270571 - MER33 DNA MER1_type 0 324 1 2105 128 0 0 chr20 32397526 32397830 -34270175 - AluSx SINE Alu -8 304 1 279 0 0 0 chr20 32398116 32398147 -34269858 + (T)n Simple_repeat Simple_repeat 1 31 0 1861 83 4 0 chr20 32398147 32398388 -34269617 - AluSc SINE Alu -67 242 1 426 65 0 0 chr20 32398666 32398728 -34269277 + (TATG)n Simple_repeat Simple_repeat 1 62 0 1469 205 3 3 chr20 32398734 32399017 -34268988 - AluJo SINE Alu -29 283 1 575 231 39 15 chr20 32399323 32399453 -34268552 - FLAM_A SINE Alu 0 133 1 260 288 0 0 chr20 32399455 32399521 -34268484 + MIR3 SINE MIR 118 183 -25 1386 157 63 24 chr20 32401722 32402009 -34265996 - AluJo SINE Alu -14 298 1 455 200 160 0 chr20 32402025 32402150 -34265855 - L1MA10 LINE L1 -7 6327 6183 24 0 0 0 chr20 32403620 32403644 -34264361 + AT_rich Low_complexity Low_complexity 1 24 0 2294 93 0 7 chr20 32404217 32404527 -34263478 - AluSg1 SINE Alu -1 308 1 1934 148 0 0 chr20 32404760 32405063 -34262942 - AluJo SINE Alu -9 303 1 242 259 152 45 chr20 32405633 32405745 -34262260 - MER5A DNA MER1_type -3 186 63 203 259 103 86 chr20 32405835 32405951 -34262054 + MIR SINE MIR 80 197 -65 1964 141 7 0 chr20 32406632 32406937 -34261068 - AluSx SINE Alu -5 307 1 1427 166 40 30 chr20 32407174 32407345 -34260660 - AluJo SINE Alu -8 304 127 2371 82 0 0 chr20 32407345 32407650 -34260355 - AluSq SINE Alu -8 305 1 1427 166 40 30 chr20 32407650 32407779 -34260226 - AluJo SINE Alu -185 127 1 822 139 0 31 chr20 32408232 32408361 -34259644 + FLAM_C SINE Alu 2 126 -17 310 267 47 12 chr20 32408363 32408449 -34259556 + L1MC4 LINE L1 6621 6709 -1333 302 191 59 29 chr20 32408388 32408456 -34259549 - L1MCa LINE L1 -4362 2064 1995 * 788 156 0 15 chr20 32409774 32409909 -34258096 - FLAM_C SINE Alu 0 133 1 1300 145 94 0 chr20 32410029 32410263 -34257742 - AluJb SINE Alu -2 310 55 189 0 0 0 chr20 32410286 32410307 -34257698 + (T)n Simple_repeat Simple_repeat 1 21 0 2156 109 0 3 chr20 32410355 32410658 -34257347 - AluSg SINE Alu -8 302 1 933 119 0 15 chr20 32411246 32411380 -34256625 - FLAM_C SINE Alu 0 133 2 2045 194 118 37 chr20 32413255 32413699 -34254306 - L1MC4 LINE L1 -2 8040 7531 1857 130 20 10 chr20 32413699 32413999 -34254006 + AluSx SINE Alu 1 303 -9 2045 194 118 37 chr20 32413999 32414171 -34253834 - L1MC4 LINE L1 -511 7531 7374 1146 130 5 5 chr20 32414171 32414356 -34253649 - AluSq SINE Alu 0 313 129 1632 184 10 10 chr20 32414408 32414713 -34253292 - AluJo SINE Alu -7 305 1 2130 120 0 0 chr20 32414965 32415265 -34252740 - AluSp SINE Alu -13 300 1 776 165 0 0 chr20 32415294 32415415 -34252590 + FLAM_A SINE Alu 1 121 -12 21 0 0 0 chr20 32415428 32415449 -34252556 + AT_rich Low_complexity Low_complexity 1 21 0 369 245 86 31 chr20 32415472 32415635 -34252370 - L1ME4a LINE L1 -79 6042 5871 1615 147 11 0 chr20 32415795 32416061 -34251944 - AluJo SINE Alu 0 312 44 2042 124 0 16 chr20 32416302 32416609 -34251396 - AluSq SINE Alu -11 302 1 2254 99 0 0 chr20 32417659 32417951 -34250054 - AluSg SINE Alu -18 292 1 1796 161 10 0 chr20 32417978 32418277 -34249728 + AluJb SINE Alu 1 302 -10 539 268 79 51 chr20 32418536 32418790 -34249215 - MIR SINE MIR 0 262 2 239 292 0 14 chr20 32418888 32418960 -34249045 - L2 LINE L2 -214 3058 2988 2052 112 14 3 chr20 32419192 32419488 -34248517 + AluSx SINE Alu 1 299 -13 287 297 45 18 chr20 32419775 32419886 -34248119 + L2 LINE L2 3158 3271 -1 966 126 6 11 chr20 32420398 32420572 -34247433 + (TTCC)n Simple_repeat Simple_repeat 4 176 0 1995 132 16 13 chr20 32420585 32420896 -34247109 - AluSx SINE Alu 0 312 1 208 239 0 0 chr20 32421003 32421049 -34246956 + MIR SINE MIR 105 150 -112 1070 145 21 31 chr20 32421519 32421712 -34246293 - AluJb SINE Alu -14 298 108 512 81 14 0 chr20 32421720 32421794 -34246211 - MADE1 DNA Mariner 0 80 6 1287 161 0 18 chr20 32421815 32422039 -34245966 - AluJo SINE Alu -92 220 1 452 230 88 49 chr20 32422128 32422223 -34245782 - L1ME4a LINE L1 -74 6047 5957 2355 193 59 72 chr20 32422223 32422384 -34245621 - MLT1E LTR MaLR -4 589 427 2083 121 0 0 chr20 32422384 32422673 -34245332 + AluSx SINE Alu 6 294 -18 2355 193 59 72 chr20 32422673 32422916 -34245089 - MLT1E LTR MaLR -166 427 193 2227 88 7 0 chr20 32422916 32423212 -34244793 - AluSp SINE Alu -15 298 1 2355 193 59 72 chr20 32423212 32423403 -34244602 - MLT1E LTR MaLR -400 193 1 452 230 88 49 chr20 32423403 32423533 -34244472 - L1ME4a LINE L1 -164 5957 5813 1859 160 0 10 chr20 32424172 32424478 -34243527 - AluJo SINE Alu -9 303 1 2125 110 23 0 chr20 32424527 32424828 -34243177 - AluSx SINE Alu -4 308 1 1168 148 0 48 chr20 32424933 32425162 -34242843 - AluJo SINE Alu 0 312 95 22 0 0 0 chr20 32425172 32425194 -34242811 + AT_rich Low_complexity Low_complexity 1 22 0 611 209 15 8 chr20 32425844 32425978 -34242027 + MIR SINE MIR 3 137 -125 187 277 31 0 chr20 32426106 32426171 -34241834 - L2 LINE L2 -84 3188 3122 2040 118 0 26 chr20 32426182 32426486 -34241519 + AluSg SINE Alu 1 296 -14 2301 97 0 3 chr20 32426486 32426796 -34241209 + AluSq SINE Alu 1 309 -4 787 72 0 0 chr20 32426957 32427054 -34240951 - AluSc SINE Alu -211 98 2 1417 102 208 12 chr20 32427256 32427501 -34240504 + AluSg1 SINE Alu 1 293 -16 1765 171 0 0 chr20 32427590 32427883 -34240122 - AluJb SINE Alu -5 307 15 1465 191 16 20 chr20 32427897 32428200 -34239805 - AluJb SINE Alu -10 302 1 1218 129 11 0 chr20 32428210 32428396 -34239609 - AluSg/x SINE Alu -2 308 121 2046 123 0 7 chr20 32428417 32428725 -34239280 - AluSx SINE Alu -6 306 1 2201 101 0 16 chr20 32429179 32429485 -34238520 - AluSq SINE Alu -12 301 1 719 250 87 63 chr20 32430252 32430361 -34237644 - MIR SINE MIR 0 262 157 2012 148 0 3 chr20 32430361 32430671 -34237334 + AluJb SINE Alu 1 309 -3 719 250 87 63 chr20 32430671 32430813 -34237192 - MIR SINE MIR -105 157 5 2352 100 0 0 chr20 32430873 32431184 -34236821 - AluSx SINE Alu 0 312 2 209 342 61 0 chr20 32431442 32431556 -34236449 + MIR3 SINE MIR 66 186 -22 1858 138 50 0 chr20 32431676 32431958 -34236047 + AluJb SINE Alu 3 298 -14 341 137 0 0 chr20 32431958 32432009 -34235996 + Alu SINE Alu 1 51 -251 318 208 0 52 chr20 32431983 32432060 -34235945 + AluJo/FRAM SINE Alu 201 273 -29 * 1097 16 0 0 chr20 32432182 32432309 -34235696 - AluYb8 SINE Alu -7 311 185 430 222 30 67 chr20 32432623 32432758 -34235247 - MIR SINE MIR -66 196 67 855 239 125 24 chr20 32433110 32433567 -34234438 - MER39 LTR ERV1 0 707 4 1866 158 0 7 chr20 32433949 32434246 -34233759 - AluSx SINE Alu -16 296 2 822 153 227 11 chr20 32434336 32434512 -34233493 - MER21B LTR ERV1 -371 492 279 245 109 164 0 chr20 32434543 32434598 -34233407 - MER21A LTR ERV1 -867 64 1 2995 157 28 36 chr20 32434693 32434865 -34233140 - MER21A-int LTR ERV1 -52 4139 3967 2241 123 0 0 chr20 32434865 32435173 -34232832 - AluSq SINE Alu -5 308 1 2995 157 28 36 chr20 32435173 32435604 -34232401 - MER21A-int LTR ERV1 -224 3967 3541 2138 90 35 3 chr20 32435604 32435893 -34232112 + AluSq SINE Alu 3 300 -13 4208 177 34 19 chr20 32435903 32436181 -34231824 - MER21A-int LTR ERV1 -1719 2472 2200 1964 141 0 25 chr20 32436181 32436364 -34231641 - AluSx SINE Alu 0 312 139 2227 83 0 0 chr20 32436364 32436671 -34231334 - AluY SINE Alu 0 311 1 1964 141 0 25 chr20 32436671 32436807 -34231198 - AluSx SINE Alu -173 139 1 4208 177 34 19 chr20 32436807 32437324 -34230681 - MER21A-int LTR ERV1 -1991 2200 1665 1964 84 0 131 chr20 32437369 32437712 -34230293 - AluSx SINE Alu -14 298 1 223 212 152 30 chr20 32437951 32438017 -34229988 - MIR SINE MIR -70 192 119 255 328 165 1 chr20 32438313 32438438 -34229567 + MIR SINE MIR 20 162 -83 181 320 25 33 chr20 32439525 32439647 -34228358 + L2 LINE L2 2307 2427 -887 862 277 8 4 chr20 32439727 32439962 -34228043 + MIR SINE MIR 2 237 -25 240 241 48 48 chr20 32440565 32440648 -34227357 + MIR SINE MIR 71 153 -55 2182 94 3 0 chr20 32440971 32441269 -34226736 + AluSx SINE Alu 2 300 -12 195 324 0 14 chr20 32441468 32441539 -34226466 - MIR SINE MIR -19 243 174 2027 127 0 7 chr20 32441738 32441907 -34226098 - AluJb SINE Alu -10 302 134 2172 96 7 0 chr20 32441907 32442198 -34225807 - AluSg SINE Alu -17 293 1 2027 127 0 7 chr20 32442198 32442328 -34225677 - AluJb SINE Alu -178 134 5 376 117 33 0 chr20 32442652 32442712 -34225293 - AluJ/FRAM SINE Alu -22 280 219 378 269 26 58 chr20 32442721 32442877 -34225128 - MIR3 SINE MIR -13 195 45 2274 83 3 0 chr20 32443396 32443696 -34224309 + AluSx SINE Alu 1 301 -11 388 275 98 95 chr20 32443953 32444258 -34223747 + L2 LINE L2 2967 3272 0 496 324 50 12 chr20 32444360 32444610 -34223395 + MIR SINE MIR 6 261 -1 1005 68 15 0 chr20 32444788 32444920 -34223085 - AluSx SINE Alu -12 300 167 1234 112 0 0 chr20 32445025 32445194 -34222811 - AluSx SINE Alu -143 169 1 932 194 0 0 chr20 32445504 32445669 -34222336 - FRAM SINE Alu -11 165 1 2143 119 0 0 chr20 32446506 32446817 -34221188 - AluSx SINE Alu -1 311 1 273 337 114 10 chr20 32447487 32447680 -34220325 - MIR SINE MIR -48 214 2 392 238 80 3 chr20 32448273 32448420 -34219585 + MIR SINE MIR 23 183 -62 221 261 108 0 chr20 32448472 32448537 -34219468 - L2 LINE L2 -94 3178 3107 1691 138 3 88 chr20 32448990 32449236 -34218769 - AluJo SINE Alu -1 311 100 2168 122 3 0 chr20 32449236 32449547 -34218458 - AluSx SINE Alu 0 312 1 1691 138 3 88 chr20 32449547 32449640 -34218365 - AluJo SINE Alu -212 100 1 767 371 105 9 chr20 32450353 32451063 -34216942 + L2 LINE L2 2510 3313 0 1453 148 115 4 chr20 32451116 32451386 -34216619 - AluJb SINE Alu -9 303 4 209 340 0 43 chr20 32452459 32452553 -34215452 + L2 LINE L2 3183 3272 0 267 187 33 66 chr20 32452557 32452648 -34215357 + MIR SINE MIR 95 182 -80 2300 68 20 0 chr20 32452782 32452906 -34215099 + AluY SINE Alu 3 123 -188 243 0 0 0 chr20 32452906 32452933 -34215072 + (TAA)n Simple_repeat Simple_repeat 2 28 0 2300 68 20 0 chr20 32452933 32453104 -34214901 + AluY SINE Alu 123 304 -7 2302 86 3 0 chr20 32453246 32453550 -34214455 - AluSp SINE Alu -8 305 1 337 262 24 0 chr20 32453904 32453988 -34214017 - MIR3 SINE MIR -40 168 83 1868 81 24 110 chr20 32454033 32454233 -34213772 - AluSq SINE Alu -7 306 145 2145 109 0 10 chr20 32454233 32454544 -34213461 - AluSc SINE Alu -1 308 1 1868 81 24 110 chr20 32454544 32454678 -34213327 - AluSq SINE Alu -168 145 1 1652 99 32 0 chr20 32454901 32455122 -34212883 + MER30 DNA MER1_type 3 230 0 220 220 267 0 chr20 32455194 32455348 -34212657 + L2 LINE L2 2783 2971 -342 276 30 0 0 chr20 32455351 32455384 -34212621 + (ATTG)n Simple_repeat Simple_repeat 4 36 0 2076 90 0 4 chr20 32455384 32455662 -34212343 - AluSc SINE Alu -32 277 1 38 22 0 0 chr20 32455665 32455710 -34212295 + AT_rich Low_complexity Low_complexity 1 45 0 265 309 202 0 chr20 32455847 32456035 -34211970 - L2 LINE L2 -569 2745 2520 317 140 0 0 chr20 32456082 32456132 -34211873 + Alu SINE Alu 249 298 -4 892 190 0 0 chr20 32456141 32456299 -34211706 + AluJo SINE Alu 1 158 -154 197 327 19 9 chr20 32456618 32456725 -34211280 + L2 LINE L2 2550 2657 -657 257 267 17 26 chr20 32456883 32456999 -34211006 + L2 LINE L2 2932 3046 -267 187 365 139 0 chr20 32457372 32457509 -34210496 - L2 LINE L2 -609 2705 2550 1665 138 75 11 chr20 32457687 32457969 -34210036 - AluJo SINE Alu -12 300 1 1767 153 10 0 chr20 32457978 32458272 -34209733 - AluJo SINE Alu -12 300 4 1955 121 0 46 chr20 32458280 32458603 -34209402 - AluSx SINE Alu -4 308 1 898 200 91 17 chr20 32458875 32459105 -34208900 - MER39 LTR ERV1 -13 694 448 2204 96 10 0 chr20 32459157 32459450 -34208555 + AluSx SINE Alu 1 296 -16 286 277 67 34 chr20 32459505 32459624 -34208381 - LTR48B LTR ERV1 -442 123 1 186 225 0 0 chr20 32459635 32459675 -34208330 + MIR SINE MIR 74 113 -149 277 179 66 113 chr20 32460840 32460946 -34207059 + MIR SINE MIR 45 145 -63 200 324 73 84 chr20 32463036 32463215 -34204790 - L2 LINE L2 -86 3186 3010 21 0 0 0 chr20 32464336 32464357 -34203648 + AT_rich Low_complexity Low_complexity 1 21 0 2130 104 17 0 chr20 32464415 32464714 -34203291 - AluSx SINE Alu -8 304 1 232 213 0 37 chr20 32465512 32465573 -34202432 + MIR SINE MIR 104 160 -62 1968 107 30 13 chr20 32465839 32466139 -34201866 + AluSq SINE Alu 9 313 0 250 307 87 55 chr20 32466147 32466274 -34201731 + MIR SINE MIR 37 167 -95 241 381 32 0 chr20 32466685 32466811 -34201194 - L2 LINE L2 0 3272 3143 2164 167 19 6 chr20 32466812 32467172 -34200833 - MLT1A1 LTR MaLR 0 365 1 6129 198 121 36 chr20 32467172 32468144 -34199861 - MLT1A1-int LTR MaLR 0 1735 847 1960 133 69 30 chr20 32468144 32468505 -34199500 - THE1C LTR MaLR 0 375 1 6129 198 121 36 chr20 32468505 32468577 -34199428 - MLT1A1-int LTR MaLR -888 847 783 1693 154 23 40 chr20 32468577 32468876 -34199129 - AluJo SINE Alu -16 296 3 6129 198 121 36 chr20 32468876 32469349 -34198656 - MLT1A1-int LTR MaLR -952 783 72 2100 134 3 3 chr20 32469349 32469648 -34198357 - AluSx SINE Alu -13 299 1 6129 198 121 36 chr20 32469648 32469727 -34198278 - MLT1A1-int LTR MaLR -1663 72 1 1774 174 54 37 chr20 32469727 32469931 -34198074 - MLT1A1 LTR MaLR 0 365 151 1914 155 10 20 chr20 32469931 32470235 -34197770 - AluJo SINE Alu -11 301 1 1774 174 54 37 chr20 32470235 32470380 -34197625 - MLT1A1 LTR MaLR -214 151 10 210 278 38 60 chr20 32470517 32470650 -34197355 - L2 LINE L2 -254 3059 2930 229 182 0 121 chr20 32470757 32470823 -34197182 + MIR SINE MIR 193 250 -12 556 223 54 0 chr20 32471331 32471461 -34196544 - MIR SINE MIR -99 163 27 200 274 27 68 chr20 32471749 32471895 -34196110 - MIR3 SINE MIR -24 184 45 2101 136 0 7 chr20 32473173 32473475 -34194530 - AluSx SINE Alu -12 300 1 2665 84 6 6 chr20 32474084 32474439 -34193566 - THE1A LTR MaLR 0 355 1 1759 166 35 0 chr20 32474878 32475038 -34192967 - AluJo SINE Alu -18 294 118 279 0 0 0 chr20 32475038 32475069 -34192936 + (TG)n Simple_repeat Simple_repeat 2 32 0 1759 166 35 0 chr20 32475069 32475192 -34192813 - AluJo SINE Alu -194 118 1 2120 123 7 0 chr20 32475505 32475805 -34192200 - AluSx SINE Alu -10 302 1 386 379 0 0 chr20 32475810 32476008 -34191997 - L1ME LINE L1 -298 5823 5626 743 287 22 38 chr20 32476113 32476482 -34191523 - L2 LINE L2 -52 3261 2899 204 209 0 0 chr20 32476490 32476533 -34191472 + CT-rich Low_complexity Low_complexity 2 44 0 1715 177 7 13 chr20 32476578 32476877 -34191128 + AluJb SINE Alu 1 297 -15 1954 126 7 3 chr20 32476880 32477166 -34190839 + AluSx SINE Alu 1 287 -25 293 210 58 94 chr20 32477670 32477734 -34190271 - MIR SINE MIR -5 257 192 1723 160 10 46 chr20 32477734 32478040 -34189965 - AluJo SINE Alu -17 295 1 293 210 58 94 chr20 32478040 32478113 -34189892 - MIR SINE MIR -70 192 125 513 275 14 14 chr20 32478185 32478323 -34189682 - MIR SINE MIR -105 157 20 2094 139 3 7 chr20 32478885 32479195 -34188810 - AluSx SINE Alu -3 309 1 974 106 0 0 chr20 32479197 32479329 -34188676 - AluJb SINE Alu -180 132 1 241 260 62 21 chr20 32479884 32479980 -34188025 + L1ME4a LINE L1 5776 5875 -246 4593 12 0 0 chr20 32480186 32480697 -34187308 - L1PA3 LINE L1 0 6155 5645 552 162 182 0 chr20 32480726 32480880 -34187125 - MER69 DNA AcHobo -1 2525 2344 235 105 0 26 chr20 32480931 32480969 -34187036 - MER69 DNA AcHobo -2489 37 1 204 40 0 0 chr20 32480999 32481024 -34186981 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 2227 111 0 0 chr20 32481032 32481321 -34186684 - AluSx SINE Alu -23 289 1 358 234 65 19 chr20 32481322 32481429 -34186576 + L1ME4a LINE L1 5982 6093 -28 1628 139 88 0 chr20 32481504 32481799 -34186206 - L1MB3 LINE L1 -3 6180 5860 4030 179 44 26 chr20 32481803 32481910 -34186095 - L1 LINE L1 -1721 4425 4321 2355 100 0 3 chr20 32481910 32482211 -34185794 - AluSg SINE Alu -10 300 1 4030 179 44 26 chr20 32482211 32482995 -34185010 - L1 LINE L1 -1825 4321 3518 215 61 30 0 chr20 32483094 32483127 -34184878 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 279 114 0 0 chr20 32483131 32483175 -34184830 + (TCCCC)n Simple_repeat Simple_repeat 5 48 0 902 93 8 23 chr20 32483179 32483308 -34184697 - FLAM_C SINE Alu -6 137 11 467 281 0 16 chr20 32483781 32483902 -34184103 - L2 LINE L2 -5 3267 3149 465 232 116 64 chr20 32485089 32485153 -34182852 + L1ME3A LINE L1 5646 5705 -465 2370 92 0 3 chr20 32485153 32485446 -34182559 + AluSg SINE Alu 1 292 -18 465 232 116 64 chr20 32485446 32485631 -34182374 + L1ME3A LINE L1 5705 5908 -262 357 260 52 88 chr20 32485648 32485773 -34182232 + L1ME3A LINE L1 5986 6103 -67 2225 103 7 0 chr20 32485773 32486064 -34181941 + AluSx SINE Alu 1 293 -19 357 260 52 88 chr20 32486064 32486130 -34181875 + L1ME3A LINE L1 6103 6170 0 257 252 76 76 chr20 32486123 32486254 -34181751 - HAL1 LINE L1 -33 2474 2344 * 405 222 74 9 chr20 32486416 32486524 -34181481 - L1MC/D LINE L1 -2107 5701 5587 405 326 94 4 chr20 32486681 32486914 -34181091 - MIR SINE MIR -1 261 8 1596 127 40 63 chr20 32487008 32487355 -34180650 - L1MA7 LINE L1 0 6291 5953 2265 91 7 0 chr20 32487373 32487659 -34180346 + AluSx SINE Alu 1 288 -24 954 93 31 0 chr20 32487691 32487820 -34180185 - FLAM_C SINE Alu 0 133 1 4793 150 15 56 chr20 32487820 32488231 -34179774 - L1MA7 LINE L1 -327 5964 5538 2708 86 14 0 chr20 32488231 32488590 -34179415 + THE1B LTR MaLR 1 364 0 4793 150 15 56 chr20 32488590 32488865 -34179140 - L1MA7 LINE L1 -753 5538 5253 2300 109 3 0 chr20 32488865 32489176 -34178829 - AluSq SINE Alu -1 312 1 2175 107 21 0 chr20 32489186 32489477 -34178528 - AluSp SINE Alu -16 297 1 4793 150 15 56 chr20 32489477 32489697 -34178308 - L1MA7 LINE L1 -1047 5244 5017 2213 134 0 3 chr20 32489697 32490010 -34177995 - AluSx SINE Alu 0 312 1 4793 150 15 56 chr20 32490010 32490727 -34177278 - L1MA7 LINE L1 -1274 5017 4398 208 138 0 77 chr20 32490745 32490810 -34177195 + (TTTTA)n Simple_repeat Simple_repeat 1 60 0 1071 75 8 0 chr20 32490815 32490948 -34177057 - AluSp SINE Alu -171 142 9 4424 209 73 16 chr20 32491112 32491295 -34176710 + L1MB8 LINE L1 3392 3563 -2583 2350 107 0 0 chr20 32491295 32491593 -34176412 - AluSg SINE Alu -12 298 1 4424 209 73 16 chr20 32491593 32492572 -34175433 + L1MB8 LINE L1 3563 4620 -1526 1049 92 5 32 chr20 32492600 32492722 -34175283 + (TTTC)n Simple_repeat Simple_repeat 1 298 0 1049 92 5 32 chr20 32492722 32492907 -34175098 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2204 115 7 7 chr20 32492954 32493258 -34174747 - AluSg SINE Alu -5 305 2 734 174 0 22 chr20 32493279 32493372 -34174633 + CT-rich Low_complexity Low_complexity 1 90 -90 2256 105 7 0 chr20 32493372 32493668 -34174337 - AluSx SINE Alu -11 301 4 734 174 0 22 chr20 32493668 32493758 -34174247 + CT-rich Low_complexity Low_complexity 90 180 0 4529 174 46 20 chr20 32493766 32494648 -34173357 + L1MB8 LINE L1 4654 5591 -587 2288 91 7 23 chr20 32494648 32494957 -34173048 + AluSq SINE Alu 1 304 -9 4529 174 46 20 chr20 32494957 32495554 -34172451 + L1MB8 LINE L1 5591 6171 -7 227 260 0 0 chr20 32495686 32495736 -34172269 - L1ME LINE L1 -518 5603 5554 359 192 75 9 chr20 32495883 32496071 -34171934 - L1P5 LINE L1 -671 5480 5279 879 148 0 0 chr20 32496081 32496209 -34171796 + FLAM_C SINE Alu 1 128 -5 450 290 66 16 chr20 32496837 32497020 -34170985 + MIR SINE MIR 30 221 -41 197 239 46 46 chr20 32497101 32497210 -34170795 - MIR SINE MIR -67 141 33 209 269 0 0 chr20 32497624 32497676 -34170329 + (TCCA)n Simple_repeat Simple_repeat 1 52 0 326 289 2 21 chr20 32497752 32497864 -34170141 - L1ME3A LINE L1 -4 6158 6048 294 100 0 0 chr20 32497869 32497909 -34170096 + Alu SINE Alu 1 40 -259 1505 116 0 0 chr20 32497967 32498166 -34169839 + AluSg/x SINE Alu 109 307 -5 1072 253 21 3 chr20 32498171 32498456 -34169549 - L1M1 LINE L1 -4444 1526 1237 2088 232 87 39 chr20 32498497 32498823 -34169182 - L1M1 LINE L1 -4516 1375 1066 1818 156 14 3 chr20 32498823 32499132 -34168873 - AluJb SINE Alu 0 312 1 2088 232 87 39 chr20 32499132 32499472 -34168533 - L1M1 LINE L1 -4825 1066 676 777 304 67 40 chr20 32499617 32500231 -34167774 - L1M1 LINE L1 -5390 501 1 321 268 65 26 chr20 32500303 32500324 -34167681 - L1MA10 LINE L1 0 6334 6314 2380 216 104 8 chr20 32500324 32500977 -34167028 - L1ME1 LINE L1 -10 6156 5420 * 8814 212 104 35 chr20 32500932 32501476 -34166529 + L1ME1 LINE L1 2522 3027 -3139 699 109 134 25 chr20 32501476 32501595 -34166410 + FLAM_C SINE Alu 1 132 -1 8814 212 104 35 chr20 32501595 32502190 -34165815 + L1ME1 LINE L1 3027 3580 -2586 577 35 0 35 chr20 32502190 32502276 -34165729 + (GAAA)n Simple_repeat Simple_repeat 3 85 0 8814 212 104 35 chr20 32502276 32503393 -34164612 + L1ME1 LINE L1 3580 4619 -1547 2008 135 0 3 chr20 32503393 32503716 -34164289 + AluSx SINE Alu 1 322 0 8814 212 104 35 chr20 32503716 32504081 -34163924 + L1ME1 LINE L1 4619 4958 -1208 4041 93 57 0 chr20 32504081 32504630 -34163375 - LTR19B LTR ERV1 0 580 1 8814 212 104 35 chr20 32504630 32505297 -34162708 + L1ME1 LINE L1 4958 6048 -118 278 206 0 0 chr20 32505294 32505357 -34162648 + L1MA10 LINE L1 6269 6331 -3 * 1581 206 127 10 chr20 32505357 32505654 -34162351 - L1ME LINE L1 -699 5467 5206 2018 144 0 16 chr20 32505654 32505959 -34162046 + AluJb SINE Alu 1 300 -12 1581 206 127 10 chr20 32505959 32506219 -34161786 - L1ME LINE L1 -960 5206 4850 841 257 16 12 chr20 32506221 32506470 -34161535 - L1ME1 LINE L1 -768 5378 5129 5151 159 29 29 chr20 32506493 32507482 -34160523 - L1MB2 LINE L1 -7 6164 5176 2002 141 17 0 chr20 32507482 32507781 -34160224 - AluSq SINE Alu -8 305 2 5151 159 29 29 chr20 32507781 32508231 -34159774 - L1MB2 LINE L1 -995 5176 4727 1066 189 21 29 chr20 32508372 32508615 -34159390 - L1MB2 LINE L1 -2156 3990 3750 1769 177 0 0 chr20 32508935 32509247 -34158758 + AluJo SINE Alu 2 313 0 2124 254 126 52 chr20 32509523 32510981 -34157024 - L1M4b LINE L1 -4012 3126 1384 23 0 0 0 chr20 32510984 32511007 -34156998 + AT_rich Low_complexity Low_complexity 1 23 0 516 301 38 59 chr20 32512754 32513043 -34154962 - L2 LINE L2 -5 3267 2985 2307 105 0 0 chr20 32516219 32516513 -34151492 - AluSx SINE Alu -18 294 1 480 163 92 29 chr20 32516694 32516818 -34151187 - MLT1C LTR MaLR 0 467 353 853 188 47 60 chr20 32517200 32517434 -34150571 - MLT1C LTR MaLR -23 444 214 298 111 0 48 chr20 32517465 32517528 -34150477 + (TTTTC)n Simple_repeat Simple_repeat 5 64 0 751 97 29 40 chr20 32517573 32517748 -34150257 + CT-rich Low_complexity Low_complexity 5 177 0 1702 136 3 57 chr20 32517729 32517922 -34150083 - AluJo SINE Alu -30 282 130 2269 129 0 0 chr20 32517922 32518231 -34149774 + AluSx SINE Alu 1 309 -3 1702 136 3 57 chr20 32518231 32518355 -34149650 - AluJo SINE Alu -182 130 1 1046 156 17 0 chr20 32518362 32518535 -34149470 - MLT1C LTR MaLR -291 176 1 2139 109 13 0 chr20 32518590 32518894 -34149111 - AluSx SINE Alu -4 308 1 548 296 87 0 chr20 32519219 32519415 -34148590 - MIR SINE MIR -9 253 41 444 246 131 24 chr20 32519899 32520107 -34147898 - MIR SINE MIR -36 226 4 398 243 132 7 chr20 32521497 32521633 -34146372 - L1ME4a LINE L1 -2 6119 5967 2167 96 0 3 chr20 32522044 32522335 -34145670 - AluSx SINE Alu -22 290 1 358 265 0 0 chr20 32522479 32522577 -34145428 + (CA)n Simple_repeat Simple_repeat 1 98 0 197 218 150 120 chr20 32523270 32523403 -34144602 + L2 LINE L2 2928 3064 -249 224 81 27 0 chr20 32523942 32523979 -34144026 - MIR SINE MIR -118 144 107 224 320 19 19 chr20 32524169 32524272 -34143733 - MIR SINE MIR -70 138 36 305 262 213 0 chr20 32524466 32524588 -34143417 + MIR SINE MIR 20 167 -95 2542 114 50 0 chr20 32524934 32525292 -34142713 + MER51B LTR ERV1 1 376 -1 247 258 25 50 chr20 32525298 32525457 -34142548 + (TCTCTG)n Simple_repeat Simple_repeat 2 156 0 409 245 63 25 chr20 32525857 32526016 -34141989 - LTR43 LTR ERV1 -306 296 132 543 229 9 0 chr20 32526194 32526299 -34141706 - MER81 DNA DNA -3 111 6 483 258 184 0 chr20 32527084 32527247 -34140758 + MIR SINE MIR 5 197 -65 210 296 0 0 chr20 32527332 32527386 -34140619 - MIR SINE MIR -140 122 69 944 229 12 41 chr20 32527423 32527667 -34140338 - MIR SINE MIR 0 262 26 292 311 47 9 chr20 32528147 32528253 -34139752 - MIR SINE MIR -70 192 83 2640 88 133 5 chr20 32528317 32528714 -34139291 + LTR7 LTR ERV1 1 448 -2 4720 38 2 5 chr20 32528786 32529344 -34138661 + LTR6B LTR ERV1 1 556 -2 251 309 12 0 chr20 32529454 32529538 -34138467 + MIR SINE MIR 43 127 -81 479 297 0 36 chr20 32529661 32529799 -34138206 + MIR SINE MIR 21 153 -109 2665 118 31 14 chr20 32530331 32530753 -34137252 - LTR3 LTR ERVK -3 429 1 243 227 23 45 chr20 32531093 32531181 -34136824 - MIR SINE MIR -134 128 43 2011 129 3 3 chr20 32532114 32532416 -34135589 + AluSx SINE Alu 1 302 -10 1822 166 0 3 chr20 32532599 32532889 -34135116 - AluSx SINE Alu -17 295 7 228 135 0 0 chr20 32533040 32533077 -34134928 - MIR SINE MIR -63 145 109 241 299 0 0 chr20 32533389 32533456 -34134549 - L2 LINE L2 -1 3312 3246 284 197 16 0 chr20 32534692 32534753 -34133252 + MIR SINE MIR 76 137 -125 329 333 135 19 chr20 32534948 32535527 -34132478 + L1M4 LINE L1 4357 5002 -1144 1571 106 0 5 chr20 32535632 32535850 -34132155 + AluSg/x SINE Alu 83 299 -13 199 267 0 0 chr20 32536751 32536796 -34131209 - L2 LINE L2 -18 3254 3210 247 242 0 30 chr20 32536946 32537012 -34130993 - MIR SINE MIR -69 139 76 235 297 24 36 chr20 32537084 32537201 -34130804 - MIR3 SINE MIR -51 157 41 331 280 28 9 chr20 32537214 32537321 -34130684 + MIR SINE MIR 37 145 -117 302 246 0 0 chr20 32537709 32537778 -34130227 - MIR SINE MIR -63 145 77 318 217 50 71 chr20 32537845 32537983 -34130022 + MIR SINE MIR 65 192 -70 239 272 56 46 chr20 32538196 32538315 -34129690 - MIR SINE MIR -71 137 16 218 273 23 8 chr20 32538601 32538701 -34129304 + MIR SINE MIR 87 187 -75 205 312 52 0 chr20 32538939 32538993 -34129012 - L3 LINE CR1 -117 1460 1403 302 232 56 40 chr20 32538993 32539118 -34128887 + MIR3 SINE MIR 2 128 -80 269 260 27 0 chr20 32539673 32539746 -34128259 + L2 LINE L2 2989 3063 -209 354 98 0 0 chr20 32539832 32539883 -34128122 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 409 309 103 12 chr20 32539907 32540072 -34127933 - MIR SINE MIR -81 181 2 264 180 33 0 chr20 32540774 32540835 -34127170 + MIR SINE MIR 77 139 -69 407 248 8 72 chr20 32540839 32540964 -34127041 + MIR SINE MIR 28 144 -118 378 315 9 41 chr20 32541074 32541339 -34126666 + C-rich Low_complexity Low_complexity 1 256 0 755 148 0 0 chr20 32541625 32541747 -34126258 - AluSc SINE Alu -2 307 186 268 313 40 0 chr20 32541768 32541867 -34126138 + MIR SINE MIR 140 242 -20 243 252 97 39 chr20 32541899 32542002 -34126003 - MIR SINE MIR -63 145 37 2112 103 0 0 chr20 32542253 32542565 -34125440 - AluSx SINE Alu 0 312 1 2377 74 0 0 chr20 32542592 32542901 -34125104 - AluY SINE Alu -2 309 1 199 47 0 93 chr20 32543089 32543132 -34124873 + (CACCC)n Simple_repeat Simple_repeat 4 42 0 415 214 34 0 chr20 32543660 32543749 -34124256 + MIR SINE MIR 74 165 -97 746 250 112 5 chr20 32543758 32543982 -34124023 - MIR SINE MIR -13 249 2 2021 191 162 12 chr20 32544063 32544606 -34123399 + MLT1G LTR MaLR 2 590 0 295 276 61 10 chr20 32544619 32544717 -34123288 - MIR SINE MIR -94 168 66 775 261 149 0 chr20 32545002 32545224 -34122781 - MIR SINE MIR -6 256 2 457 271 32 52 chr20 32545470 32545605 -34122400 + HAL1 LINE L1 2 135 -2372 392 303 56 67 chr20 32545605 32545800 -34122205 + MER91A DNA MER1_type 4 196 0 457 271 32 52 chr20 32545800 32545819 -34122186 + HAL1 LINE L1 135 153 -2354 958 171 25 0 chr20 32545819 32545977 -34122028 - MER20 DNA MER1_type -57 162 1 521 204 163 41 chr20 32546015 32546211 -34121794 + HAL1 LINE L1 265 484 -2023 1122 251 107 7 chr20 32546211 32546772 -34121233 + L1ME LINE L1 5072 5696 -474 333 297 34 34 chr20 32546764 32546939 -34121066 + HAL1 LINE L1 1189 1363 -1144 * 729 258 26 37 chr20 32547375 32547565 -34120440 - MER5A DNA MER1_type 0 189 2 1110 284 44 54 chr20 32547986 32548293 -34119712 + L1MCc LINE L1 1284 1593 -1709 1469 158 124 0 chr20 32548293 32548558 -34119447 + AluSx SINE Alu 1 298 -14 1110 284 44 54 chr20 32548558 32549261 -34118744 + L1MCc LINE L1 1593 2581 -721 635 343 46 8 chr20 32549696 32549935 -34118070 - MIR SINE MIR -6 256 9 314 365 6 11 chr20 32550127 32550305 -34117700 + (TCCA)n Simple_repeat Simple_repeat 1 177 0 245 274 0 9 chr20 32550354 32550467 -34117538 + (TCCA)n Simple_repeat Simple_repeat 4 115 0 227 221 15 15 chr20 32550505 32550573 -34117432 + (TCCA)n Simple_repeat Simple_repeat 3 70 0 325 341 230 0 chr20 32550577 32550794 -34117211 - L2 LINE L2 -3 3269 3003 674 268 33 11 chr20 32551406 32551589 -34116416 + MIR SINE MIR 16 202 -60 1660 120 30 63 chr20 32551733 32552034 -34115971 + AluJb SINE Alu 1 291 -21 819 95 32 32 chr20 32552043 32552169 -34115836 + AluSg/x SINE Alu 182 307 -5 1750 238 27 31 chr20 32552170 32552413 -34115592 + L1 LINE L1 3918 4160 -1986 1582 166 12 63 chr20 32552413 32552732 -34115273 + AluJo SINE Alu 1 303 -9 1750 238 27 31 chr20 32552732 32552967 -34115038 + L1 LINE L1 4160 4394 -1752 2186 93 3 0 chr20 32552989 32553279 -34114726 + AluSg1 SINE Alu 1 291 -18 239 271 47 24 chr20 32553628 32553713 -34114292 - MIR SINE MIR -118 144 58 240 182 117 13 chr20 32553911 32553988 -34114017 + L2 LINE L2 2965 3049 -223 196 182 23 0 chr20 32554201 32554245 -34113760 - L2 LINE L2 -290 2982 2938 2012 127 27 0 chr20 32554247 32554539 -34113466 + AluJb SINE Alu 1 300 -12 813 45 30 15 chr20 32555184 32555317 -34112688 + (TTTC)n Simple_repeat Simple_repeat 2 136 0 234 0 0 0 chr20 32555318 32555344 -34112661 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 1932 116 60 0 chr20 32555344 32555628 -34112377 - AluSg SINE Alu -9 301 1 269 364 0 7 chr20 32555850 32555993 -34112012 + (TGGA)n Simple_repeat Simple_repeat 3 144 0 196 227 186 10 chr20 32556666 32556763 -34111242 - MIR SINE MIR -65 143 30 583 300 128 36 chr20 32556889 32557279 -34110726 + MLT1L LTR MaLR 138 563 -52 21 0 0 0 chr20 32557328 32557349 -34110656 + AT_rich Low_complexity Low_complexity 1 21 0 430 350 0 0 chr20 32557623 32557760 -34110245 + L2 LINE L2 3133 3269 -3 234 358 9 28 chr20 32557763 32557872 -34110133 + MIR SINE MIR 64 170 -92 188 333 17 42 chr20 32558229 32558349 -34109656 - MIR3 SINE MIR -42 166 50 1708 145 7 14 chr20 32558526 32558816 -34109189 + AluSx SINE Alu 5 292 -20 2039 205 48 36 chr20 32558987 32559484 -34108521 + MLT1D LTR MaLR 3 505 0 258 143 61 0 chr20 32559571 32559620 -34108385 - L2 LINE L2 0 3313 3262 220 320 20 26 chr20 32560289 32560442 -34107563 + (CA)n Simple_repeat Simple_repeat 1 152 0 308 307 99 0 chr20 32562445 32562546 -34105459 + L2 LINE L2 3200 3310 -3 269 245 143 10 chr20 32563714 32563812 -34104193 - MIR SINE MIR -77 131 21 198 188 16 62 chr20 32563993 32564057 -34103948 + MIR SINE MIR 202 262 0 344 242 137 72 chr20 32564098 32564251 -34103754 - MIR SINE MIR -72 190 28 290 286 116 0 chr20 32565261 32565373 -34102632 - Charlie8 DNA MER1_type -2230 187 63 2108 110 0 0 chr20 32565375 32565696 -34102309 + AluSq SINE Alu 3 323 0 334 349 101 18 chr20 32566218 32566387 -34101618 - L3 LINE CR1 -28 1549 1367 272 222 152 20 chr20 32566764 32566863 -34101142 + MIR SINE MIR 64 175 -33 603 257 11 23 chr20 32567074 32567249 -34100756 - MIR SINE MIR -13 249 77 347 218 0 22 chr20 32567748 32567848 -34100157 - MIR SINE MIR -63 145 59 736 282 25 5 chr20 32568073 32568275 -34099730 - MIR SINE MIR -20 242 37 295 308 84 28 chr20 32569565 32569708 -34098297 + MIR SINE MIR 112 262 0 225 208 21 0 chr20 32569902 32569950 -34098055 - MIR SINE MIR -56 152 104 365 121 0 0 chr20 32571132 32571190 -34096815 - AluJ/FLAM SINE Alu -244 58 1 227 325 115 40 chr20 32571355 32571555 -34096450 + MIR SINE MIR 1 215 -47 260 305 144 0 chr20 32572954 32573072 -34094933 + L2 LINE L2 2907 3041 -231 868 335 84 20 chr20 32573471 32573922 -34094083 + L2 LINE L2 2834 3313 0 207 262 16 0 chr20 32574847 32574908 -34093097 + (TCTG)n Simple_repeat Simple_repeat 3 64 0 451 298 13 26 chr20 32575206 32575357 -34092648 + MIR SINE MIR 71 219 -43 692 147 57 62 chr20 32576266 32576443 -34091562 + MER3 DNA MER1_type 1 129 -80 557 276 0 0 chr20 32576500 32576623 -34091382 + L2 LINE L2 3150 3272 0 462 315 31 6 chr20 32576789 32576951 -34091054 - MIR SINE MIR -51 211 46 324 281 11 11 chr20 32577217 32577306 -34090699 + C-rich Low_complexity Low_complexity 3 91 0 285 320 108 54 chr20 32577770 32578067 -34089938 - L3 LINE CR1 -4 1573 1261 742 185 13 9 chr20 32578694 32579009 -34088996 + (TCCA)n Simple_repeat Simple_repeat 1 316 0 701 171 23 0 chr20 32579037 32579212 -34088793 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 744 172 17 0 chr20 32579257 32579431 -34088574 + (TCCA)n Simple_repeat Simple_repeat 2 178 0 371 270 42 20 chr20 32579680 32579901 -34088104 - LTR41 LTR ERVL -6 767 510 495 223 86 29 chr20 32580316 32580491 -34087514 - LTR41 LTR ERVL -588 185 1 940 300 4 12 chr20 32581234 32581484 -34086521 + MIR SINE MIR 3 250 -12 389 280 0 53 chr20 32581507 32581639 -34086366 - MIR3 SINE MIR -47 161 37 455 289 149 38 chr20 32582411 32582754 -34085251 + L2 LINE L2 2933 3313 0 703 245 19 0 chr20 32583135 32583290 -34084715 - MIR3 SINE MIR -37 171 14 230 257 14 40 chr20 32583913 32583987 -34084018 + MIR3 SINE MIR 115 186 -22 265 313 64 18 chr20 32584193 32584395 -34083610 + L2 LINE L2 2994 3296 -17 255 61 0 0 chr20 32584400 32584433 -34083572 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 345 302 8 31 chr20 32585523 32585652 -34082353 - MIR SINE MIR -81 181 56 403 228 65 0 chr20 32585719 32585811 -34082194 + MIR SINE MIR 42 139 -123 344 314 122 45 chr20 32586252 32586539 -34081466 + L2 LINE L2 2862 3170 -102 296 354 7 7 chr20 32586865 32587009 -34080996 + MIR SINE MIR 49 192 -70 459 331 0 0 chr20 32587161 32587309 -34080696 + MER117 DNA MER1_type 40 187 -10 1216 182 9 23 chr20 32587330 32587550 -34080455 + MER20 DNA MER1_type 3 219 0 318 214 48 12 chr20 32587550 32587634 -34080371 - MIR3 SINE MIR -48 160 74 233 374 197 4 chr20 32588016 32588270 -34079735 - L2 LINE L2 -2 3270 2968 576 263 113 0 chr20 32588872 32589032 -34078973 + MER117 DNA MER1_type 1 178 -19 282 208 130 0 chr20 32589106 32589183 -34078822 + MIR SINE MIR 39 125 -83 265 292 0 0 chr20 32589778 32589843 -34078162 + MIR SINE MIR 78 142 -66 255 342 0 0 chr20 32589954 32590041 -34077964 - MIR SINE MIR -61 147 68 264 317 25 8 chr20 32590475 32590595 -34077410 - MIR SINE MIR -92 170 49 235 300 83 42 chr20 32590680 32590800 -34077205 - MIR SINE MIR -114 148 24 182 302 115 0 chr20 32591034 32591130 -34076875 + MIR3 SINE MIR 101 207 -1 213 360 29 0 chr20 32591570 32591742 -34076263 + (TCCA)n Simple_repeat Simple_repeat 3 179 0 334 274 12 0 chr20 32591912 32592080 -34075925 + (TCCA)n Simple_repeat Simple_repeat 3 172 0 228 278 13 7 chr20 32592132 32592283 -34075722 + (TCCA)n Simple_repeat Simple_repeat 3 154 0 432 234 12 136 chr20 32593459 32593684 -34074321 - L2 LINE L2 -174 3098 2900 268 136 0 0 chr20 32594322 32594366 -34073639 + L2 LINE L2 3008 3051 -221 281 303 46 37 chr20 32594372 32594481 -34073524 - MIR SINE MIR 0 262 153 774 224 4 80 chr20 32594554 32594659 -34073346 - MLT1K LTR MaLR -3 585 506 2510 65 0 0 chr20 32594659 32594965 -34073040 - AluY SINE Alu -5 306 1 774 224 4 80 chr20 32594965 32595096 -34072909 - MLT1K LTR MaLR -82 506 367 311 345 43 0 chr20 32595416 32595555 -34072450 + L3 LINE CR1 1382 1526 -51 281 256 0 26 chr20 32595825 32595903 -34072102 + MIR SINE MIR 73 148 -114 184 339 16 0 chr20 32595973 32596035 -34071970 + L2 LINE L2 3182 3244 -28 350 299 49 35 chr20 32596077 32596221 -34071784 - MIR SINE MIR -68 194 49 258 220 33 33 chr20 32596800 32596891 -34071114 - MER117 DNA MER1_type -2 195 105 471 284 102 23 chr20 32597227 32597403 -34070602 + MIR SINE MIR 63 252 -10 348 287 25 11 chr20 32597410 32597566 -34070439 - MIR SINE MIR -27 235 76 754 260 39 6 chr20 32598050 32598231 -34069774 - MIR SINE MIR -12 250 64 454 298 58 23 chr20 32598294 32598465 -34069540 - MIR SINE MIR -43 219 43 * 986 216 4 76 chr20 32598436 32598595 -34069410 + MIR SINE MIR 11 140 -122 5921 146 35 36 chr20 32598595 32599668 -34068337 + MER11C LTR ERVK 1 1071 0 986 216 4 76 chr20 32599668 32599779 -34068226 + MIR SINE MIR 140 257 -5 431 241 0 9 chr20 32600217 32600329 -34067676 - LTR37A LTR ERV1 -77 349 239 354 268 15 52 chr20 32600627 32600796 -34067209 - L1MC4 LINE L1 -1320 7002 1914 302 341 61 37 chr20 32600740 32600904 -34067101 + L1MCa LINE L1 1896 2063 -4363 * 329 307 51 44 chr20 32600822 32600959 -34067046 - L1MC4 LINE L1 -1334 6708 6571 2119 89 31 3 chr20 32602018 32602311 -34065694 + AluSc SINE Alu 1 301 -8 360 0 0 0 chr20 32602419 32602459 -34065546 + (TG)n Simple_repeat Simple_repeat 2 41 0 409 278 56 35 chr20 32602954 32603098 -34064907 + MIR3 SINE MIR 23 169 -39 395 254 56 16 chr20 32603261 32603387 -34064618 - MIR3 SINE MIR -72 136 6 424 224 103 58 chr20 32603708 32603864 -34064141 - MIR SINE MIR -79 183 21 207 327 109 10 chr20 32603961 32604062 -34063943 + MER5B DNA MER1_type 18 128 -50 499 287 79 12 chr20 32604297 32604461 -34063544 + MIR SINE MIR 81 255 -7 658 241 81 66 chr20 32604600 32604693 -34063312 + L1ME2 LINE L1 5598 5688 -482 2128 112 0 0 chr20 32604693 32604980 -34063025 + AluSx SINE Alu 9 295 -17 658 241 81 66 chr20 32604980 32605285 -34062720 + L1ME2 LINE L1 5688 6028 -142 318 215 0 25 chr20 32605297 32605376 -34062629 + L1ME3A LINE L1 6089 6165 -5 284 277 160 27 chr20 32605540 32605728 -34062277 - L2 LINE L2 -82 3190 2978 614 250 118 26 chr20 32605761 32606033 -34061972 + L2 LINE L2 2834 3130 -183 1158 145 0 0 chr20 32606048 32606214 -34061791 - AluSg/x SINE Alu -22 290 125 342 0 0 0 chr20 32606225 32606263 -34061742 + (TA)n Simple_repeat Simple_repeat 1 38 0 2045 103 31 0 chr20 32606264 32606555 -34061450 - AluY SINE Alu -11 300 1 1063 188 74 11 chr20 32606595 32606866 -34061139 + MER33 DNA MER1_type 1 288 -36 333 244 139 35 chr20 32606872 32606987 -34061018 + L2 LINE L2 3187 3313 0 640 303 127 21 chr20 32608004 32608344 -34059661 - L2 LINE L2 -86 3227 2852 296 330 29 10 chr20 32608756 32608859 -34059146 + MIR SINE MIR 39 143 -65 447 279 18 14 chr20 32609836 32609977 -34058028 + MIR SINE MIR 25 167 -56 238 213 0 0 chr20 32609973 32610020 -34057985 - L2 LINE L2 -2 3270 3224 * 252 185 0 141 chr20 32610546 32610638 -34057367 + MIR SINE MIR 40 119 -89 210 274 0 0 chr20 32610642 32610693 -34057312 + L2 LINE L2 2975 3025 -288 384 306 75 8 chr20 32610727 32610861 -34057144 + L2 LINE L2 3150 3292 -21 2154 94 3 0 chr20 32610863 32611151 -34056854 - AluSq SINE Alu -10 303 15 653 126 5 0 chr20 32611152 32611484 -34056521 + CER Satellite Satellite 1 333 -33 496 252 91 0 chr20 32611566 32611740 -34056265 - MIR SINE MIR -6 256 60 513 263 18 0 chr20 32612013 32612127 -34055878 - MIR SINE MIR -96 166 51 376 279 36 0 chr20 32612147 32612258 -34055747 + MIR SINE MIR 148 262 0 345 302 52 75 chr20 32612424 32612732 -34055273 - L2 LINE L2 -165 3107 2807 582 224 121 0 chr20 32612781 32612946 -34055059 - MIR SINE MIR -1 261 77 360 233 17 67 chr20 32614046 32614166 -34053839 + MIR3 SINE MIR 58 171 -37 2190 108 16 0 chr20 32614234 32614541 -34053464 - AluSx SINE Alu 0 312 1 324 0 0 0 chr20 32615014 32615050 -34052955 + (TTCA)n Simple_repeat Simple_repeat 4 39 0 319 320 82 21 chr20 32616287 32616578 -34051427 + MER102b DNA MER1_type 31 339 -2 331 214 111 51 chr20 32616621 32616738 -34051267 + MIR3 SINE MIR 85 208 0 237 316 0 25 chr20 32617586 32617665 -34050340 - L2 LINE L2 -13 3259 3183 210 313 60 0 chr20 32617635 32617718 -34050287 - MIR SINE MIR -97 165 78 * 466 274 96 0 chr20 32617870 32618016 -34049989 + MIR SINE MIR 2 161 -101 199 289 0 0 chr20 32618020 32618065 -34049940 + L2 LINE L2 3210 3254 -18 554 362 0 0 chr20 32618649 32618837 -34049168 - MER117 DNA MER1_type -9 188 1 1616 166 97 0 chr20 32618937 32619215 -34048790 + AluJb SINE Alu 6 310 -2 419 178 22 0 chr20 32619215 32619305 -34048700 + GA-rich Low_complexity Low_complexity 1 92 0 599 284 108 20 chr20 32619880 32620130 -34047875 - Charlie8 DNA MER1_type -2145 272 1 772 302 79 0 chr20 32620141 32620356 -34047649 + MIR SINE MIR 29 260 -2 280 250 60 12 chr20 32620579 32620663 -34047342 - MER117 DNA MER1_type -72 125 38 842 228 73 69 chr20 32621720 32622277 -34045728 - L2 LINE L2 0 3313 2749 365 338 7 7 chr20 32622292 32622431 -34045574 + L2 LINE L2 3132 3270 -2 214 338 0 0 chr20 32623424 32623492 -34044513 + L2 LINE L2 3246 3313 0 209 306 144 59 chr20 32625992 32626263 -34041742 - L2 LINE L2 0 3272 2979 547 248 0 0 chr20 32626624 32626729 -34041276 - MER117 DNA MER1_type -1 196 92 298 313 87 26 chr20 32626796 32626911 -34041094 - MER117 DNA MER1_type -9 188 67 310 321 24 41 chr20 32626928 32627073 -34040932 - MIR SINE MIR -63 145 36 230 246 49 0 chr20 32627113 32627174 -34040831 - L2 LINE L2 -2 3270 3207 285 261 7 43 chr20 32627681 32627819 -34040186 + (TCTCTG)n Simple_repeat Simple_repeat 1 133 0 229 224 0 0 chr20 32627831 32627880 -34040125 - L2 LINE L2 -239 3033 2985 262 270 87 17 chr20 32628014 32628129 -34039876 - MIR SINE MIR -70 138 16 183 80 0 0 chr20 32628299 32628324 -34039681 + (CAGC)n Simple_repeat Simple_repeat 1 25 0 978 157 0 0 chr20 32628326 32628635 -34039370 + (TCCA)n Simple_repeat Simple_repeat 1 309 0 213 224 0 0 chr20 32628637 32628695 -34039310 + CT-rich Low_complexity Low_complexity 1 58 0 210 182 23 0 chr20 32628713 32628757 -34039248 - L2 LINE L2 -1 3271 3227 435 306 30 0 chr20 32628826 32628960 -34039045 + MIR SINE MIR 10 147 -115 477 269 30 0 chr20 32629332 32629466 -34038539 + MIR SINE MIR 110 247 -15 229 195 23 69 chr20 32629473 32629560 -34038445 + L2 LINE L2 2928 3010 -262 212 247 165 0 chr20 32629610 32629695 -34038310 + L2 LINE L2 3105 3203 -69 587 293 95 35 chr20 32629733 32629965 -34038040 - MIR SINE MIR -10 252 7 808 262 4 26 chr20 32629979 32630209 -34037796 - MIR SINE MIR -12 250 27 258 274 46 97 chr20 32630745 32630981 -34037024 - MIR SINE MIR -4 258 22 200 330 101 0 chr20 32631024 32631133 -34036872 - MIR SINE MIR -45 217 98 199 214 114 0 chr20 32631410 32631480 -34036525 - MIR SINE MIR -168 94 17 221 228 35 0 chr20 32632054 32632111 -34035894 - L2 LINE L2 -333 2980 2922 641 212 28 1 chr20 32632239 32632405 -34035600 + L1ME2 LINE L1 5990 6165 -1 336 260 108 64 chr20 32632415 32632619 -34035386 + L1MC4 LINE L1 7829 8041 -1 492 275 44 12 chr20 32632800 32632960 -34035045 - MIR SINE MIR -70 192 28 426 210 0 0 chr20 32634372 32634491 -34033514 + (TGGA)n Simple_repeat Simple_repeat 1 119 0 348 212 23 0 chr20 32634529 32634661 -34033344 + (TGGA)n Simple_repeat Simple_repeat 3 137 0 327 352 21 7 chr20 32634685 32634827 -34033178 + (TGGA)n Simple_repeat Simple_repeat 3 146 0 251 245 0 0 chr20 32635458 32635511 -34032494 - L2 LINE L2 -5 3267 3215 688 267 114 8 chr20 32635536 32635772 -34032233 + MIR SINE MIR 2 262 0 2163 75 7 0 chr20 32636000 32636308 -34031697 - AluSq SINE Alu 0 310 1 264 352 0 0 chr20 32636445 32636533 -34031472 - MIR3 SINE MIR -15 193 106 312 231 16 48 chr20 32636723 32636984 -34031021 + (TGG)n Simple_repeat Simple_repeat 1 252 0 362 259 19 19 chr20 32637735 32637843 -34030162 + MIR SINE MIR 47 154 -108 624 307 9 89 chr20 32637930 32638246 -34029759 - L2 LINE L2 -5 3267 2977 286 279 99 0 chr20 32638314 32638425 -34029580 + L1ME4a LINE L1 5960 6081 -40 511 297 31 73 chr20 32638814 32638849 -34029156 + MIR SINE MIR 1 36 -226 2329 86 0 0 chr20 32638849 32639152 -34028853 + AluSq SINE Alu 1 303 -10 511 297 31 73 chr20 32639152 32639375 -34028630 + MIR SINE MIR 36 248 -14 367 295 148 16 chr20 32640152 32640335 -34027670 + MIR SINE MIR 45 251 -11 879 311 59 14 chr20 32640918 32641339 -34026666 - L1MC4a LINE L1 -1737 6071 5632 372 119 0 0 chr20 32641394 32641453 -34026552 + (CA)n Simple_repeat Simple_repeat 2 60 0 1052 175 0 0 chr20 32641870 32642047 -34025958 + AluJb SINE Alu 136 312 0 208 211 0 0 chr20 32642062 32642100 -34025905 + MIR SINE MIR 106 143 -65 250 306 0 0 chr20 32642187 32642249 -34025756 - L2 LINE L2 -1 3271 3210 540 267 199 14 chr20 32642878 32643099 -34024906 + MIR SINE MIR 1 262 0 276 215 183 0 chr20 32643516 32643609 -34024396 + MIR SINE MIR 33 142 -66 501 258 38 0 chr20 32643734 32643866 -34024139 - MER91C DNA MER1_type 0 140 4 525 254 25 0 chr20 32644154 32644276 -34023729 - MIR SINE MIR -63 145 21 900 218 97 0 chr20 32644637 32644843 -34023162 - MIR SINE MIR 0 262 37 921 239 5 15 chr20 32644902 32645107 -34022898 + MER63A DNA MER1_type 1 203 -7 675 275 73 97 chr20 32645311 32645830 -34022175 - L2 LINE L2 0 3272 2770 392 188 54 9 chr20 32646753 32646865 -34021140 - L1MC4 LINE L1 0 8042 7926 785 207 2 0 chr20 32646878 32647372 -34020633 + (TCCA)n Simple_repeat Simple_repeat 1 495 0 223 225 0 0 chr20 32647372 32647412 -34020593 + (CCCA)n Simple_repeat Simple_repeat 1 40 0 776 176 6 0 chr20 32647421 32647586 -34020419 + (TCCA)n Simple_repeat Simple_repeat 4 169 0 248 51 0 26 chr20 32647592 32647631 -34020374 + (TCTG)n Simple_repeat Simple_repeat 3 40 0 294 237 52 44 chr20 32647631 32647766 -34020239 - L1MC4 LINE L1 -120 7922 7787 1053 241 100 38 chr20 32647780 32648121 -34019884 - MER113 DNA MER1_type? -138 383 22 2210 109 0 3 chr20 32648171 32648475 -34019530 - AluSx SINE Alu 0 312 10 609 278 28 33 chr20 32649033 32649245 -34018760 + MIR SINE MIR 20 230 -32 364 231 77 29 chr20 32649307 32649411 -34018594 + MIR SINE MIR 71 179 -83 2036 134 3 0 chr20 32649953 32650251 -34017754 - AluSx SINE Alu -13 299 1 223 179 299 0 chr20 32650320 32650387 -34017618 - MIR SINE MIR -68 140 54 369 239 34 68 chr20 32650799 32650973 -34017032 + MIR SINE MIR 36 199 -62 186 314 70 12 chr20 32651024 32651110 -34016895 - MIR SINE MIR -7 255 165 188 302 19 0 chr20 32651618 32651671 -34016334 + MIR SINE MIR 66 119 -89 * 397 241 146 36 chr20 32651665 32651802 -34016203 + MIR SINE MIR 48 199 -63 201 344 0 0 chr20 32651844 32651905 -34016100 + MIR SINE MIR 202 262 0 436 252 72 7 chr20 32651952 32652091 -34015914 - L2 LINE L2 -2 3311 3164 576 213 293 16 chr20 32652111 32652139 -34015866 + L2 LINE L2 2688 2707 -606 2138 123 0 0 chr20 32652139 32652440 -34015565 + AluSx SINE Alu 1 301 -11 576 213 293 16 chr20 32652440 32652661 -34015344 + L2 LINE L2 2707 3006 -307 238 149 0 0 chr20 32652662 32652709 -34015296 - Alu SINE Alu -1 298 252 244 298 0 0 chr20 32652720 32652777 -34015228 + L2 LINE L2 3213 3269 -3 355 318 9 28 chr20 32653186 32653397 -34014608 + L2 LINE L2 2828 3034 -238 1374 129 35 129 chr20 32654414 32654724 -34013281 + AluJo SINE Alu 5 285 -27 228 35 0 0 chr20 32654741 32654770 -34013235 + (GGA)n Simple_repeat Simple_repeat 2 30 0 394 355 27 32 chr20 32654784 32654970 -34013035 - MIR SINE MIR -31 231 47 592 277 42 0 chr20 32654993 32655159 -34012846 + MIR SINE MIR 15 187 -75 322 299 0 75 chr20 32655151 32655226 -34012779 - MIR SINE MIR 0 262 202 * 1978 128 27 0 chr20 32655226 32655522 -34012483 - AluJb SINE Alu -8 304 1 322 299 0 75 chr20 32655522 32655593 -34012412 - MIR SINE MIR -60 202 127 182 333 79 9 chr20 32655725 32655839 -34012166 - L2 LINE L2 -237 3035 2914 536 189 5 5 chr20 32656326 32656443 -34011562 - MIR SINE MIR -49 159 43 189 75 38 151 chr20 32656830 32656883 -34011122 - MIR SINE MIR -61 147 101 380 262 56 16 chr20 32657051 32657177 -34010828 + MIR3 SINE MIR 71 201 -7 303 243 17 6 chr20 32657483 32657560 -34010445 - MIR SINE MIR -110 98 32 496 246 72 7 chr20 32657661 32657799 -34010206 - MIR SINE MIR -70 192 46 349 312 28 18 chr20 32657825 32657934 -34010071 - MIR SINE MIR -50 212 103 397 308 101 0 chr20 32657961 32658130 -34009875 - MIR SINE MIR -48 214 29 191 200 100 17 chr20 32658243 32658303 -34009702 + MIR SINE MIR 88 152 -56 314 250 112 72 chr20 32658764 32658916 -34009089 - L1ME4a LINE L1 0 6121 5964 237 331 28 42 chr20 32659505 32659647 -34008358 + MIR3 SINE MIR 33 172 -36 310 235 134 42 chr20 32659688 32659807 -34008198 - MER103 DNA DNA -1 165 36 551 339 56 50 chr20 32659968 32660042 -34007963 - L2 LINE L2 0 3272 3200 1959 112 0 0 chr20 32660042 32660311 -34007694 - AluSx SINE Alu -5 307 39 551 339 56 50 chr20 32660311 32660596 -34007409 - L2 LINE L2 -72 3200 2911 2048 134 7 0 chr20 32660600 32660905 -34007100 + AluSg SINE Alu 1 307 -3 367 104 15 15 chr20 32660911 32660978 -34007027 + (GAAAA)n Simple_repeat Simple_repeat 4 70 0 1976 117 28 7 chr20 32660989 32661108 -34006897 + AluSx SINE Alu 5 120 -192 297 19 19 39 chr20 32661108 32661160 -34006845 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 1976 117 28 7 chr20 32661160 32661330 -34006675 + AluSx SINE Alu 120 300 -12 293 239 193 0 chr20 32661701 32661789 -34006216 - MIR SINE MIR -70 192 88 507 246 46 15 chr20 32661803 32661933 -34006072 - L2 LINE L2 -5 3267 3134 261 295 115 0 chr20 32662003 32662087 -34005918 - L1ME4a LINE L1 0 6121 6048 225 108 0 0 chr20 32662087 32662124 -34005881 + (TA)n Simple_repeat Simple_repeat 1 37 0 261 295 115 0 chr20 32662124 32662178 -34005827 - L1ME4a LINE L1 -73 6048 5967 717 274 91 12 chr20 32662215 32662456 -34005549 + MIR SINE MIR 2 261 -1 303 297 10 10 chr20 32662467 32662568 -34005437 - L1ME4a LINE L1 -399 5722 5622 362 178 67 22 chr20 32662800 32662890 -34005115 + MIR SINE MIR 107 200 -62 210 37 0 0 chr20 32662964 32662991 -34005014 + (CAT)n Simple_repeat Simple_repeat 2 28 0 310 311 77 0 chr20 32663078 32663195 -34004810 - MIR SINE MIR -61 147 53 712 219 19 42 chr20 32663310 32663525 -34004480 + MER20B DNA MER1_type 570 779 -4 631 218 6 13 chr20 32663604 32663760 -34004245 - L1MD2 LINE L1 -10 6349 6195 2255 237 93 13 chr20 32663770 32664375 -34003630 - L1MC4a LINE L1 -159 7649 6983 213 94 0 0 chr20 32664375 32664407 -34003598 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2255 237 93 13 chr20 32664407 32664475 -34003530 - L1MC4a LINE L1 -825 6983 6922 2261 104 0 13 chr20 32664475 32664792 -34003213 - AluSq SINE Alu 0 313 1 610 318 30 30 chr20 32665682 32665915 -34002090 + MIR SINE MIR 20 252 -10 354 289 38 96 chr20 32666318 32666609 -34001396 - L2 LINE L2 -28 3285 3012 278 277 35 7 chr20 32666862 32667003 -34001002 + L2 LINE L2 2514 2658 -656 1654 185 79 40 chr20 32667007 32667461 -34000544 - MER66A LTR ERV1 0 478 94 225 343 48 38 chr20 32667535 32667745 -34000260 + L2 LINE L2 2650 2861 -453 1083 80 0 0 chr20 32667934 32668071 -33999934 + AluSx SINE Alu 1 137 -175 340 267 11 0 chr20 32668071 32668161 -33999844 + LTR30 LTR ERV1 552 642 -80 2378 78 0 18 chr20 32668161 32668492 -33999513 + pTR5 LTR ERV1 66 390 -2048 448 147 0 0 chr20 32668492 32668560 -33999445 + AluS SINE Alu 229 296 -14 6010 111 17 15 chr20 32668560 32668605 -33999400 - LOR1-int LTR ERV1 -5013 3107 3064 10504 25 1 74 chr20 32668605 32670138 -33997867 + SVA Other Other 1 1394 0 193 40 0 0 chr20 32670138 32670163 -33997842 + (CAAAA)n Simple_repeat Simple_repeat 2 80 0 6010 111 17 15 chr20 32670163 32671268 -33996737 - LOR1-int LTR ERV1 -5056 3064 1875 2517 69 0 0 chr20 32671268 32671573 -33996432 - AluY SINE Alu -6 305 1 6010 111 17 15 chr20 32671573 32671722 -33996283 - LOR1-int LTR ERV1 -6245 1875 1728 1277 148 0 0 chr20 32671725 32671914 -33996091 + AluSx SINE Alu 119 307 -3 990 218 242 16 chr20 32672556 32672946 -33995059 - MLT1G3 LTR MaLR 0 530 43 3222 117 21 2 chr20 32672993 32673473 -33994532 - MER41E LTR ERV1 0 512 24 270 258 0 30 chr20 32673674 32673740 -33994265 - MIR3 SINE MIR -41 167 104 923 283 63 25 chr20 32673800 32674268 -33993737 - MLT1H1 LTR MaLR -18 537 1 248 299 86 37 chr20 32674430 32674698 -33993307 + L1ME4a LINE L1 5841 6121 0 491 323 57 40 chr20 32675068 32675124 -33992881 - MIR SINE MIR -6 256 202 2740 96 3 0 chr20 32675124 32675478 -33992527 + THE1A LTR MaLR 1 355 0 12236 88 4 1 chr20 32675478 32677053 -33990952 + THE1A-int LTR MaLR 1 1580 0 2732 96 3 0 chr20 32677053 32677407 -33990598 + THE1A LTR MaLR 1 355 0 491 323 57 40 chr20 32677407 32677596 -33990409 - MIR SINE MIR -59 203 5 181 272 124 55 chr20 32677678 32677880 -33990125 - L2 LINE L2 -460 2854 2639 454 278 50 33 chr20 32678378 32678558 -33989447 - MER5A DNA MER1_type -6 183 1 232 262 110 76 chr20 32678558 32678671 -33989334 - MIR3 SINE MIR -57 151 34 228 244 0 0 chr20 32679279 32679324 -33988681 - L2 LINE L2 -2 3311 3267 215 277 148 25 chr20 32679604 32679750 -33988255 - MIR SINE MIR -24 184 14 454 303 37 62 chr20 32679756 32680000 -33988005 - MIR SINE MIR -9 253 16 406 298 10 0 chr20 32680490 32680594 -33987411 - MIR SINE MIR -110 152 48 1836 138 0 4 chr20 32680822 32681090 -33986915 + AluJb SINE Alu 33 299 -13 1392 191 62 4 chr20 32681105 32681361 -33986644 - AluJo SINE Alu -33 279 9 254 235 37 12 chr20 32681380 32681461 -33986544 + Charlie2 DNA MER1_type 223 305 -2477 1273 215 81 53 chr20 32681485 32682016 -33985989 + Charlie2 DNA MER1_type 1900 2445 -417 2194 104 18 18 chr20 32682038 32682214 -33985791 - L1PB1 LINE L1 0 6151 5973 2082 92 46 7 chr20 32682214 32682495 -33985510 - AluSc SINE Alu -17 292 1 2194 104 18 18 chr20 32682495 32682656 -33985349 - L1PB1 LINE L1 -177 5974 5814 2252 72 3 16 chr20 32682707 32683025 -33984980 - L1PB1 LINE L1 -341 5810 5497 1118 299 79 17 chr20 32683058 32683526 -33984479 + L2 LINE L2 2817 3313 0 1001 190 22 105 chr20 32683555 32683713 -33984292 + Charlie2 DNA MER1_type 2468 2581 -281 2386 102 0 13 chr20 32683713 32684028 -33983977 - AluSx SINE Alu -1 311 1 1001 190 22 105 chr20 32684028 32684232 -33983773 + Charlie2 DNA MER1_type 2581 2800 -62 1996 251 58 33 chr20 32684242 32684842 -33983163 + L1ME3A LINE L1 5456 6077 -93 2162 143 13 40 chr20 32684842 32685240 -33982765 - MLT1B LTR MaLR -2 388 2 1996 251 58 33 chr20 32685240 32685329 -33982676 + L1ME3A LINE L1 6077 6162 -8 194 231 0 28 chr20 32686860 32686968 -33981037 + (CA)n Simple_repeat Simple_repeat 1 105 0 269 235 284 0 chr20 32687335 32687437 -33980568 + MIR SINE MIR 14 145 -63 1851 173 7 0 chr20 32687642 32687942 -33980063 + AluSx SINE Alu 1 302 -10 444 265 73 20 chr20 32688371 32688522 -33979483 - MER104 DNA Tc2 -21 159 1 2205 116 0 13 chr20 32688610 32688948 -33979057 - AluSx SINE Alu 0 312 1 1024 284 41 3 chr20 32688959 32689279 -33978726 - L1ME3 LINE L1 -1 6161 5830 774 205 6 0 chr20 32689329 32689490 -33978515 + L1PB4 LINE L1 5940 6101 -55 643 96 0 0 chr20 32689492 32689575 -33978430 - AluS SINE Alu -227 85 3 272 301 0 24 chr20 32690214 32690297 -33977708 - L2 LINE L2 -10 3303 3223 1459 29 0 0 chr20 32691475 32691645 -33976360 - L1PA2 LINE L1 0 6155 5986 13693 158 16 7 chr20 32695351 32699078 -33968927 - L1MA2 LINE L1 -1 7722 3961 3722 152 11 2 chr20 32699325 32699937 -33968068 - L1MA2 LINE L1 -6234 1331 714 2281 104 0 3 chr20 32700163 32700462 -33967543 + AluSx SINE Alu 5 302 -10 536 255 169 9 chr20 32700530 32700761 -33967244 - L1ME3 LINE L1 -295 5826 5559 476 283 12 30 chr20 32700778 32700944 -33967061 - MIR SINE MIR -4 258 96 527 132 11 0 chr20 32701041 32701132 -33966873 + GA-rich Low_complexity Low_complexity 1 92 0 238 260 62 10 chr20 32701179 32701275 -33966730 + L1MC4a LINE L1 6074 6174 -1634 2016 156 7 10 chr20 32701323 32701625 -33966380 + AluJb SINE Alu 5 305 -7 514 203 13 0 chr20 32702529 32702687 -33965318 + (TGGA)n Simple_repeat Simple_repeat 3 162 0 226 254 34 0 chr20 32703073 32703132 -33964873 + L3 LINE CR1 1516 1576 -1 246 312 0 0 chr20 32703141 32703218 -33964787 - Charlie8 DNA MER1_type 0 2417 2341 602 249 156 13 chr20 32703264 32703489 -33964516 - Charlie8 DNA MER1_type -2152 265 9 479 200 310 0 chr20 32703647 32703792 -33964213 - MIR SINE MIR -66 196 7 2392 58 3 14 chr20 32703819 32704137 -33963868 + AluSc SINE Alu 1 309 0 1682 206 29 6 chr20 32704881 32705230 -33962775 - LTR16C LTR ERVL -7 484 128 2182 142 0 0 chr20 32705651 32705961 -33962044 + AluSx SINE Alu 1 310 -2 365 216 72 10 chr20 32706015 32706112 -33961893 - MIR SINE MIR -93 169 67 1227 178 28 0 chr20 32706165 32706378 -33961627 + MER20 DNA MER1_type 1 219 0 287 230 132 69 chr20 32706428 32706602 -33961403 - MIR3 SINE MIR -12 196 12 213 299 73 73 chr20 32707110 32707274 -33960731 + L2 LINE L2 3139 3302 -11 353 302 23 0 chr20 32707305 32707434 -33960571 + (TGGA)n Simple_repeat Simple_repeat 1 132 0 666 148 0 0 chr20 32707440 32707555 -33960450 + (GGGA)n Simple_repeat Simple_repeat 4 118 0 206 272 22 33 chr20 32707583 32707675 -33960330 + GA-rich Low_complexity Low_complexity 1 91 0 * 387 318 24 0 chr20 32707637 32707807 -33960198 + (TGGA)n Simple_repeat Simple_repeat 3 176 0 380 290 5 10 chr20 32708452 32708554 -33959451 + MIR SINE MIR 63 153 -55 469 210 57 32 chr20 32708560 32708717 -33959288 + MER104 DNA Tc2 4 164 -16 2357 95 16 0 chr20 32708824 32709129 -33958876 - AluSx SINE Alu -2 310 1 286 250 216 0 chr20 32709368 32709456 -33958549 + MIR SINE MIR 152 258 -4 461 291 0 14 chr20 32710629 32710770 -33957235 + MIR3 SINE MIR 5 143 -65 2136 144 0 3 chr20 32711383 32711688 -33956317 + AluJb SINE Alu 1 304 -8 183 271 0 100 chr20 32711796 32711866 -33956139 - L3 LINE CR1 -1282 295 233 184 314 57 14 chr20 32712082 32712152 -33955853 + MIR3 SINE MIR 9 81 -127 * 282 329 0 0 chr20 32712148 32712221 -33955784 + MIR SINE MIR 111 183 -79 258 180 0 0 chr20 32712247 32712297 -33955708 + Alu SINE Alu 253 302 0 401 271 0 9 chr20 32712555 32712662 -33955343 + MIR SINE MIR 39 144 -64 198 0 0 0 chr20 32713029 32713051 -33954954 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 446 331 0 0 chr20 32713051 32713184 -33954821 - MIR SINE MIR -32 230 98 258 252 206 0 chr20 32713206 32713313 -33954692 + MIR SINE MIR 29 157 -105 475 307 12 18 chr20 32713367 32713533 -33954472 - MIR SINE MIR -60 202 38 182 322 17 0 chr20 32714443 32714502 -33953503 - MER5A DNA MER1_type -2 187 128 181 254 73 0 chr20 32714454 32714509 -33953496 + MER5A DNA MER1_type 22 80 -109 * 181 268 134 59 chr20 32714577 32714816 -33953189 + L2 LINE L2 1834 2090 -1224 1127 272 81 18 chr20 32714832 32715229 -33952776 + MLT1K LTR MaLR 167 588 0 2331 112 0 0 chr20 32715654 32715957 -33952048 - AluSx SINE Alu -9 303 1 243 286 66 35 chr20 32716033 32716214 -33951791 - MIR SINE MIR -66 142 5 618 315 56 14 chr20 32716221 32716437 -33951568 - MIR SINE MIR -14 248 24 198 342 81 19 chr20 32716678 32716839 -33951166 + L2 LINE L2 3102 3272 0 237 358 73 0 chr20 32716955 32717078 -33950927 - L2 LINE L2 -19 3253 3122 1869 94 4 0 chr20 32717218 32717452 -33950553 + AluSx SINE Alu 2 236 -76 24 0 0 0 chr20 32717460 32717484 -33950521 + AT_rich Low_complexity Low_complexity 1 24 0 948 202 22 6 chr20 32717511 32717694 -33950311 + MIR SINE MIR 13 198 -64 483 246 11 11 chr20 32718167 32718342 -33949663 + CT-rich Low_complexity Low_complexity 4 178 0 276 259 24 12 chr20 32718379 32718464 -33949541 - L2 LINE L2 -1 3271 3186 203 171 0 24 chr20 32719502 32719543 -33948462 + GA-rich Low_complexity Low_complexity 1 40 0 26 0 0 0 chr20 32719638 32719664 -33948341 + AT_rich Low_complexity Low_complexity 1 26 0 2327 110 3 0 chr20 32719684 32719993 -33948012 - AluSq SINE Alu -3 310 1 274 186 43 14 chr20 32719993 32720063 -33947942 - Tigger5 DNA MER2_type -1 2322 2251 264 151 38 0 chr20 32720033 32720086 -33947919 - Tigger5 DNA MER2_type -2268 55 1 * 595 271 17 58 chr20 32720148 32720370 -33947635 - MIR SINE MIR -43 219 7 224 125 0 0 chr20 32720439 32720471 -33947534 - MIR SINE MIR -63 145 114 337 307 44 0 chr20 32721158 32721272 -33946733 + MIR SINE MIR 92 210 -52 452 291 47 0 chr20 32721394 32721542 -33946463 + MIR3 SINE MIR 54 208 0 385 331 96 68 chr20 32722238 32722561 -33945444 - L2 LINE L2 -8 3264 2933 492 285 49 7 chr20 32722569 32722713 -33945292 + MIR SINE MIR 17 166 -96 411 316 130 17 chr20 32723136 32723550 -33944455 - L1MC/D LINE L1 -2093 5715 5255 301 267 13 0 chr20 32723772 32723847 -33944158 - MIR SINE MIR -58 150 75 380 240 20 82 chr20 32723859 32724055 -33943950 - HAL1 LINE L1 -321 2186 2003 1759 148 69 4 chr20 32724093 32724370 -33943635 - AluJb SINE Alu -17 295 1 3733 102 32 7 chr20 32724455 32725050 -33942955 - L1PA8 LINE L1 -1021 5125 4516 7159 67 4 0 chr20 32725050 32726090 -33941915 + L1PA8 LINE L1 5128 6171 -1 337 308 38 45 chr20 32726099 32726232 -33941773 - HAL1 LINE L1 -647 1860 1729 521 352 11 6 chr20 32726401 32726577 -33941428 + MIR SINE MIR 77 253 -9 2280 88 7 0 chr20 32727166 32727480 -33940525 - AluSp SINE Alu 0 316 1 289 335 49 24 chr20 32727485 32727649 -33940356 + MIR SINE MIR 25 192 -70 2171 138 0 0 chr20 32728305 32728602 -33939403 + AluJb SINE Alu 1 297 -15 399 190 245 49 chr20 32728675 32728838 -33939167 + MIR SINE MIR 68 262 0 517 278 98 10 chr20 32729322 32729527 -33938478 + MIR SINE MIR 9 231 -31 771 254 10 0 chr20 32729535 32729732 -33938273 - L1M4 LINE L1 -3559 2587 2389 192 77 0 0 chr20 32729732 32729758 -33938247 + (TAA)n Simple_repeat Simple_repeat 2 27 0 415 313 87 48 chr20 32730317 32730618 -33937387 + L2 LINE L2 2705 3014 -258 408 173 58 122 chr20 32730720 32730748 -33937257 - L2 LINE L2 -1 3271 3243 2249 114 0 3 chr20 32730748 32731047 -33936958 + AluSx SINE Alu 1 298 -14 408 173 58 122 chr20 32731047 32731157 -33936848 - L2 LINE L2 -29 3243 3142 222 312 39 0 chr20 32731349 32731426 -33936579 - L2 LINE L2 -244 3069 2990 336 314 10 0 chr20 32731488 32731590 -33936415 + L2 LINE L2 3169 3271 -1 21 36 0 0 chr20 32732209 32732237 -33935768 + AT_rich Low_complexity Low_complexity 1 28 0 232 310 9 69 chr20 32732346 32732462 -33935543 + MER5A DNA MER1_type 66 174 -15 421 264 36 0 chr20 32732471 32732581 -33935424 + MER5A DNA MER1_type 2 115 -74 2071 141 0 0 chr20 32732824 32733144 -33934861 + AluSx SINE Alu 1 320 0 1951 158 3 6 chr20 32733612 32733923 -33934082 + AluSx SINE Alu 1 310 -2 603 273 0 0 chr20 32733966 32734098 -33933907 - MIR SINE MIR -52 210 79 182 239 39 115 chr20 32734768 32734898 -33933107 + MIR SINE MIR 9 128 -134 322 265 98 23 chr20 32735190 32735322 -33932683 - MIR3 SINE MIR -22 186 45 291 184 0 0 chr20 32735326 32735375 -33932630 - L2 LINE L2 0 3313 3265 472 286 19 19 chr20 32735899 32736060 -33931945 - MIR SINE MIR -72 190 30 202 185 309 25 chr20 32736058 32736139 -33931866 - MIR SINE MIR -121 141 38 * 809 200 98 36 chr20 32736698 32736923 -33931082 + MIR SINE MIR 16 254 -8 821 227 132 40 chr20 32737054 32737358 -33930647 + MLT1J LTR MaLR 10 341 -170 226 270 14 14 chr20 32737482 32737556 -33930449 + MIR SINE MIR 67 140 -68 230 261 0 0 chr20 32737620 32737666 -33930339 - L2 LINE L2 -12 3301 3256 235 244 0 0 chr20 32737666 32737711 -33930294 + MER20 DNA MER1_type 13 57 -162 1552 157 14 27 chr20 32737711 32738061 -33929944 - MER4A LTR ERV1 0 664 261 474 135 34 11 chr20 32738061 32738150 -33929855 - MER4A LTR ERV1 -566 98 8 416 35 17 0 chr20 32738150 32738208 -33929797 + (TTTA)n Simple_repeat Simple_repeat 2 60 0 9880 29 1 204 chr20 32738208 32739923 -33928082 - SVA Other Other -19 1367 1 653 217 50 25 chr20 32739980 32740141 -33927864 + MER20 DNA MER1_type 54 218 -1 2449 63 7 10 chr20 32740142 32740442 -33927563 + AluY SINE Alu 1 299 -12 227 159 0 0 chr20 32740704 32740748 -33927257 + Alu SINE Alu 255 298 -1 2331 88 112 0 chr20 32741519 32741858 -33926147 + MER51B LTR ERV1 1 377 0 2079 109 11 7 chr20 32741976 32742295 -33925710 - AluSx SINE Alu 0 320 1 2470 95 0 0 chr20 32742876 32743182 -33924823 - AluSc SINE Alu -3 306 1 2323 114 7 0 chr20 32743464 32743770 -33924235 + AluSx SINE Alu 1 308 -4 283 307 0 0 chr20 32744046 32744121 -33923884 - MIR SINE MIR -71 137 63 277 283 9 38 chr20 32744299 32744405 -33923600 + L2 LINE L2 2932 3034 -238 237 108 0 0 chr20 32744648 32744685 -33923320 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 892 222 29 64 chr20 32745951 32746361 -33921644 - MLT1A1 LTR MaLR -6 379 5 498 254 29 29 chr20 32746575 32746713 -33921292 + MIR SINE MIR 48 185 -77 200 312 128 9 chr20 32746726 32746835 -33921170 - MIR SINE MIR -102 160 39 200 306 42 0 chr20 32746907 32746979 -33921026 - MIR3 SINE MIR -37 171 97 317 333 89 60 chr20 32747489 32747804 -33920201 - MLT1J LTR MaLR -159 352 29 233 260 39 65 chr20 32747814 32747891 -33920114 + MIR SINE MIR 109 183 -79 267 232 172 20 chr20 32748133 32748232 -33919773 + MIR SINE MIR 32 145 -63 2267 97 7 0 chr20 32748237 32748527 -33919478 + AluSg SINE Alu 1 292 -18 462 350 108 34 chr20 32749140 32749586 -33918419 - L1ME LINE L1 -5591 479 1 615 112 0 22 chr20 32749697 32749947 -33918058 + AluSx SINE Alu 1 300 -10 340 114 0 25 chr20 32749951 32750030 -33917975 + (CAAA)n Simple_repeat Simple_repeat 4 80 0 304 178 122 84 chr20 32750317 32750424 -33917581 + L1ME4a LINE L1 5975 6085 -36 2116 107 7 13 chr20 32750464 32750784 -33917221 + AluSq SINE Alu 1 313 0 435 226 284 26 chr20 32751231 32751421 -33916584 - MIR SINE MIR -12 250 12 272 262 0 0 chr20 32751644 32751719 -33916286 + MIR SINE MIR 75 146 -62 257 226 12 71 chr20 32751726 32751810 -33916195 + MIR3 SINE MIR 109 187 -21 583 221 44 19 chr20 32752208 32752366 -33915639 + L2 LINE L2 2919 3080 -233 183 271 130 79 chr20 32752658 32752835 -33915170 + L2 LINE L2 3122 3307 -6 406 248 30 10 chr20 32753406 32753507 -33914498 + MIR SINE MIR 110 212 -50 1696 258 55 51 chr20 32753644 32754283 -33913722 + L2 LINE L2 2317 2958 -355 1492 145 6 130 chr20 32754283 32754480 -33913525 - AluJo SINE Alu 0 302 165 195 42 0 0 chr20 32754480 32754504 -33913501 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1492 145 6 130 chr20 32754504 32754651 -33913354 - AluJo SINE Alu -137 165 1 1696 258 55 51 chr20 32754651 32754887 -33913118 + L2 LINE L2 2958 3191 -122 215 297 154 11 chr20 32755001 32755092 -33912913 + L2 LINE L2 3210 3313 0 323 256 16 66 chr20 32755357 32755478 -33912527 + MIR SINE MIR 34 148 -60 298 338 58 26 chr20 32755947 32756120 -33911885 + MIR SINE MIR 15 185 -23 1963 130 11 0 chr20 32756639 32756915 -33911090 + AluJb SINE Alu 11 289 -23 301 252 61 17 chr20 32757400 32757515 -33910490 - L1M LINE L1 -971 5388 5269 1656 208 0 10 chr20 32757534 32757827 -33910178 - AluJb SINE Alu -22 290 1 25 0 0 0 chr20 32757828 32757853 -33910152 + AT_rich Low_complexity Low_complexity 1 25 0 233 163 175 25 chr20 32757861 32757941 -33910064 - HAL1b LINE L1 -625 723 632 205 328 152 24 chr20 32758049 32758174 -33909831 - L3 LINE CR1 -1398 179 39 261 297 0 14 chr20 32759089 32759163 -33908842 + MIR SINE MIR 81 153 -109 * 551 324 62 9 chr20 32759157 32759382 -33908623 - MIR SINE MIR 0 262 26 180 0 0 0 chr20 32760117 32760137 -33907868 + (A)n Simple_repeat Simple_repeat 1 20 0 2316 110 0 19 chr20 32760287 32760595 -33907410 - AluSx SINE Alu -10 302 1 233 347 56 0 chr20 32760845 32760917 -33907088 - MIR SINE MIR -113 149 74 714 298 48 20 chr20 32760928 32761176 -33906829 - MIR SINE MIR 0 262 8 1065 316 20 49 chr20 32761527 32762014 -33905991 - L2 LINE L2 0 3313 2841 445 205 235 25 chr20 32762129 32762329 -33905676 + L2 LINE L2 3015 3256 -57 390 381 70 31 chr20 32762316 32762699 -33905306 - L2 LINE L2 -50 3222 2825 * 1476 173 45 6 chr20 32762895 32763207 -33904798 - MER33 DNA MER1_type 0 324 1 255 274 41 0 chr20 32763342 32763415 -33904590 + Charlie8 DNA MER1_type 33 108 -2309 199 280 80 0 chr20 32764166 32764241 -33903764 + MIR3 SINE MIR 76 156 -52 2176 132 0 0 chr20 32764407 32764695 -33903310 - AluSx SINE Alu -24 288 1 339 85 0 0 chr20 32764699 32764746 -33903259 + (T)n Simple_repeat Simple_repeat 1 47 0 467 285 63 8 chr20 32764769 32764949 -33903056 - MIR SINE MIR -63 199 18 329 323 84 6 chr20 32764914 32765081 -33902924 + L2 LINE L2 2756 2935 -379 * 311 206 48 16 chr20 32765919 32765982 -33902023 + MIR SINE MIR 36 100 -162 753 259 64 18 chr20 32766150 32766370 -33901635 + MIR SINE MIR 32 261 -1 335 283 150 0 chr20 32766390 32766510 -33901495 - MER5A DNA MER1_type -1 188 51 229 236 0 0 chr20 32766745 32766800 -33901205 + L1MC4 LINE L1 6649 6703 -1339 211 150 25 0 chr20 32766800 32766840 -33901165 + (TA)n Simple_repeat Simple_repeat 2 42 0 205 119 24 24 chr20 32766837 32766879 -33901126 + (TGAA)n Simple_repeat Simple_repeat 4 45 0 * 245 345 146 6 chr20 32766894 32767059 -33900946 + MER5A DNA MER1_type 2 189 0 782 292 124 27 chr20 32767268 32767679 -33900326 + L2 LINE L2 2863 3313 0 219 283 30 40 chr20 32768029 32768128 -33899877 + MIR3 SINE MIR 62 159 -49 287 252 94 142 chr20 32768171 32768595 -33899410 + L2 LINE L2 2908 3311 -2 203 301 66 10 chr20 32768910 32769052 -33898953 - MIR SINE MIR -74 188 2 961 281 108 41 chr20 32769670 32769851 -33898154 - L2 LINE L2 -423 2891 2724 2330 90 3 10 chr20 32769851 32770152 -33897853 - AluSg SINE Alu -11 299 1 961 281 108 41 chr20 32770152 32770433 -33897572 - L2 LINE L2 -590 2724 2398 335 281 67 59 chr20 32770553 32770688 -33897317 - L2 LINE L2 0 3272 3137 207 304 76 13 chr20 32771375 32771454 -33896551 + MIR SINE MIR 30 113 -95 509 325 57 25 chr20 32771811 32772094 -33895911 - L1ME LINE L1 -339 5782 5491 1584 202 21 9 chr20 32772107 32772434 -33895571 - MLT1B LTR MaLR 0 390 60 513 263 110 59 chr20 32772555 32772589 -33895416 - L1ME LINE L1 -748 5398 5367 2012 127 3 0 chr20 32772589 32772881 -33895124 - AluSx SINE Alu -19 293 1 513 263 110 59 chr20 32772881 32773318 -33894687 - L1ME LINE L1 -779 5367 4903 282 306 110 57 chr20 32773454 32773502 -33894503 - L1ME LINE L1 -1488 4658 4614 1718 139 56 14 chr20 32773502 32773790 -33894215 + AluJo SINE Alu 1 300 -12 2251 82 0 0 chr20 32773793 32774085 -33893920 + AluY SINE Alu 1 292 -19 282 306 110 57 chr20 32774085 32774559 -33893446 - L1ME LINE L1 -1533 4613 4104 305 287 112 39 chr20 32774569 32774826 -33893179 - L1ME LINE L1 -2099 4047 3810 2102 101 0 23 chr20 32774826 32775133 -33892872 - AluSx SINE Alu -12 300 1 305 287 112 39 chr20 32775133 32775517 -33892488 - L1ME LINE L1 -2336 3810 3359 771 264 55 8 chr20 32775728 32775963 -33892042 - MLT1L LTR MaLR -2 613 368 1284 89 0 0 chr20 32776213 32776393 -33891612 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 410 215 0 25 chr20 32776553 32776632 -33891373 + L2 LINE L2 3237 3313 0 283 243 143 0 chr20 32776644 32776714 -33891291 - MIR SINE MIR -76 186 107 188 227 100 73 chr20 32777324 32777434 -33890571 - MIR SINE MIR -66 142 30 512 187 37 37 chr20 32778221 32778328 -33889677 + MIR SINE MIR 47 153 -109 218 255 0 0 chr20 32778715 32778762 -33889243 + CT-rich Low_complexity Low_complexity 2 48 0 253 279 127 57 chr20 32779013 32779523 -33888482 + L2 LINE L2 2345 2980 -292 362 247 43 32 chr20 32779541 32779634 -33888371 - L2 LINE L2 0 3272 3179 206 380 133 0 chr20 32779663 32779776 -33888229 + L2 LINE L2 3133 3260 -12 * 235 240 0 0 chr20 32779774 32779824 -33888181 - L2 LINE L2 -1 3312 3263 263 272 197 27 chr20 32779846 32779993 -33888012 + MIR SINE MIR 20 191 -71 392 360 50 37 chr20 32780235 32780477 -33887528 + MIR SINE MIR 2 246 -16 246 217 14 29 chr20 32781003 32781072 -33886933 - L2 LINE L2 -82 3231 3164 229 271 0 0 chr20 32781598 32781657 -33886348 - L2 LINE L2 -1 3312 3254 260 252 49 49 chr20 32781740 32781863 -33886142 + L2 LINE L2 3150 3272 0 2128 240 67 27 chr20 32781955 32782585 -33885420 + L1ME3A LINE L1 5505 6159 -11 1730 170 0 3 chr20 32782604 32782887 -33885118 + AluJo SINE Alu 1 282 -30 2061 128 3 0 chr20 32783015 32783311 -33884694 + AluSx SINE Alu 1 297 -15 571 291 49 32 chr20 32783438 32783685 -33884320 - MIR SINE MIR -2 260 10 354 294 44 22 chr20 32784306 32784442 -33883563 - MIR SINE MIR -16 246 108 660 142 0 9 chr20 32784458 32784530 -33883475 + L1MB1 LINE L1 6056 6128 -40 1897 132 6 26 chr20 32784530 32784991 -33883014 + AluSx SINE Alu 1 312 0 660 142 0 9 chr20 32784991 32785031 -33882974 + L1MB1 LINE L1 6128 6167 -1 1702 176 10 0 chr20 32785040 32785336 -33882669 + AluJb SINE Alu 1 299 -13 193 326 22 11 chr20 32785446 32785535 -33882470 + MIR SINE MIR 43 132 -76 2160 119 0 3 chr20 32785899 32786202 -33881803 - AluSx SINE Alu -10 302 1 530 277 76 11 chr20 32786517 32786701 -33881304 + L1ME1 LINE L1 5948 6143 -23 374 235 189 30 chr20 32787459 32787591 -33880414 - MIR SINE MIR -81 181 29 360 256 183 55 chr20 32787919 32788138 -33879867 + MIR SINE MIR 2 248 -14 2118 106 7 3 chr20 32788414 32788717 -33879288 + AluSx SINE Alu 1 304 -8 202 294 203 7 chr20 32788882 32789025 -33878980 + MIR SINE MIR 89 259 -3 274 325 83 0 chr20 32789059 32789179 -33878826 + MIR SINE MIR 54 183 -79 418 275 28 0 chr20 32790439 32790548 -33877457 + MIR SINE MIR 35 146 -62 225 290 0 16 chr20 32790956 32791018 -33876987 + MIR3 SINE MIR 96 156 -52 346 302 81 40 chr20 32791107 32791256 -33876749 + MIR SINE MIR 108 262 0 531 45 0 0 chr20 32791562 32791628 -33876377 + (TG)n Simple_repeat Simple_repeat 2 67 0 388 296 128 25 chr20 32792088 32792291 -33875714 - MIR SINE MIR -33 229 6 414 301 80 16 chr20 32792573 32792760 -33875245 + MIR SINE MIR 31 230 -32 332 304 18 0 chr20 32793028 32793140 -33874865 + (TCCA)n Simple_repeat Simple_repeat 1 114 0 284 257 9 92 chr20 32793646 32793793 -33874212 + MIR SINE MIR 15 145 -63 797 158 6 0 chr20 32794207 32794365 -33873640 + (TGGA)n Simple_repeat Simple_repeat 3 161 0 188 301 68 0 chr20 32794479 32794552 -33873453 + MIR3 SINE MIR 82 159 -49 203 244 0 0 chr20 32795254 32795295 -33872710 + (TCCA)n Simple_repeat Simple_repeat 4 44 0 439 292 11 6 chr20 32796479 32796657 -33871348 + (CA)n Simple_repeat Simple_repeat 2 180 0 1688 186 7 0 chr20 32797295 32797585 -33870420 + AluSx SINE Alu 1 292 -20 4342 133 53 1 chr20 32797603 32798305 -33869700 + L1PA15 LINE L1 5428 6165 0 1679 153 0 80 chr20 32798825 32799164 -33868841 + AluJo SINE Alu 1 312 0 393 188 80 36 chr20 32799253 32799365 -33868640 - MIR3 SINE MIR -7 201 85 2602 235 31 20 chr20 32800250 32800885 -33867120 + L1M4 LINE L1 5 646 -5896 913 171 92 22 chr20 32800919 32801297 -33866708 + LTR54B LTR ERV1 1 456 -42 4302 206 55 21 chr20 32801615 32802547 -33865458 - MER70-int LTR ERVL -1114 4540 2715 2007 164 88 35 chr20 32802684 32803117 -33864888 - MSTB2 LTR MaLR 0 457 2 10984 206 45 7 chr20 32803218 32805437 -33862568 - MER70-int LTR ERVL -2299 2724 421 2202 181 45 24 chr20 32806284 32806821 -33861184 + L1M4 LINE L1 851 1398 -5144 2331 59 0 20 chr20 32806829 32807135 -33860870 - AluY SINE Alu -11 300 1 24 0 0 0 chr20 32807146 32807170 -33860835 + AT_rich Low_complexity Low_complexity 1 24 0 195 194 0 42 chr20 32807189 32807261 -33860744 + (TA)n Simple_repeat Simple_repeat 1 69 0 3846 118 16 26 chr20 32807262 32807292 -33860713 - L1MA2 LINE L1 -27 6277 6248 1982 142 0 3 chr20 32807292 32807602 -33860403 - AluSx SINE Alu -3 309 1 3846 118 16 26 chr20 32807602 32808190 -33859815 - L1MA2 LINE L1 -56 6248 5665 3296 224 76 24 chr20 32808189 32808391 -33859614 + L1M4 LINE L1 1392 1582 -5062 * 1718 170 27 0 chr20 32808391 32808691 -33859314 + AluSx SINE Alu 1 308 -4 3296 224 76 24 chr20 32808691 32810347 -33857658 + L1M4 LINE L1 1582 3365 -3279 414 244 56 0 chr20 32810465 32810555 -33857450 + AluS SINE Alu 1 95 -208 655 258 0 40 chr20 32810864 32811058 -33856947 + L1P4 LINE L1 5435 5616 -558 2259 103 0 22 chr20 32811349 32811668 -33856337 + AluSq SINE Alu 1 312 -1 357 259 27 76 chr20 32811759 32811896 -33856109 - L1ME2 LINE L1 -16 6148 6029 1938 147 0 0 chr20 32811896 32812196 -33855809 + AluSx SINE Alu 1 300 -12 357 259 27 76 chr20 32812196 32812321 -33855684 - L1ME2 LINE L1 -135 6029 5899 434 211 32 2 chr20 32812325 32812432 -33855573 + L1MD2 LINE L1 5590 5685 -481 24 0 0 0 chr20 32812446 32812470 -33855535 + GC_rich Low_complexity Low_complexity 1 24 0 1921 132 0 7 chr20 32812492 32812772 -33855233 - AluSx SINE Alu -34 278 1 812 191 32 0 chr20 32812781 32812938 -33855067 + L1MD2 LINE L1 5694 5855 -504 340 326 84 37 chr20 32813076 32813291 -33854714 - L1MDa LINE L1 -6309 231 7 429 308 45 19 chr20 32813357 32813513 -33854492 + HERV16 LTR ERVL 2473 2632 -2364 2172 103 6 32 chr20 32813525 32813546 -33854459 - HSMAR2 DNA Mariner -965 337 317 1982 115 54 3 chr20 32813546 32813842 -33854163 + AluSx SINE Alu 1 311 -1 2172 103 6 32 chr20 32813842 32814161 -33853844 - HSMAR2 DNA Mariner -985 317 6 868 240 15 2 chr20 32814164 32814360 -33853645 - MLT2F LTR ERVL -47 616 183 204 218 73 28 chr20 32814434 32814517 -33853488 + MIR SINE MIR 15 99 -109 2144 71 0 0 chr20 32814547 32814815 -33853190 - AluY SINE Alu -12 299 32 2135 180 118 52 chr20 32815019 32815542 -33852463 - MLT1F1 LTR MaLR 0 567 10 629 254 45 124 chr20 32815841 32816372 -33851633 - MER113 DNA MER1_type? -28 493 5 304 312 0 0 chr20 32816608 32816685 -33851320 - MIR SINE MIR -166 96 20 909 184 11 0 chr20 32816863 32817048 -33850957 + MER53 DNA DNA 2 188 -1 2134 122 64 9 chr20 32817052 32817397 -33850608 + THE1C LTR MaLR 1 364 -11 1458 312 70 37 chr20 32817490 32818240 -33849765 + HERV16 LTR ERVL 3053 3834 -1820 1683 164 17 0 chr20 32818240 32818527 -33849478 + AluJb SINE Alu 1 292 -20 1458 312 70 37 chr20 32818527 32818609 -33849396 + HERV16 LTR ERVL 3834 3912 -1742 1086 308 35 14 chr20 32818607 32819036 -33848969 + HERV16 LTR ERVL 4178 4615 -870 * 2145 200 58 38 chr20 32819077 32819598 -33848407 - MLT1F LTR MaLR -9 533 3 2153 148 10 63 chr20 32820290 32820454 -33847551 - MLT1B LTR MaLR 0 390 219 1410 184 5 119 chr20 32820454 32820866 -33847139 + MLT1A1 LTR MaLR 1 365 0 2153 148 10 63 chr20 32820866 32820975 -33847030 - MLT1B LTR MaLR -171 219 144 1975 141 0 3 chr20 32820975 32821274 -33846731 + AluJb SINE Alu 1 298 -14 2153 148 10 63 chr20 32821274 32821411 -33846594 - MLT1B LTR MaLR -246 144 1 1143 264 98 12 chr20 32821478 32821895 -33846110 + LTR16A1 LTR ERVL 5 457 0 2229 107 0 3 chr20 32821986 32822294 -33845711 + AluSx SINE Alu 1 307 -5 816 113 16 0 chr20 32822304 32822428 -33845577 + AluJo/FLAM SINE Alu 1 126 -186 1931 130 7 10 chr20 32822315 32822615 -33845390 + AluJo SINE Alu 13 311 -1 227 266 51 0 chr20 32822715 32822794 -33845211 + L1MC/D LINE L1 5567 5649 -2159 453 277 26 117 chr20 32823256 32823487 -33844518 - L1MC4 LINE L1 -1 8041 7832 1994 117 0 0 chr20 32823489 32823763 -33844242 + AluSq SINE Alu 1 274 -39 225 0 0 0 chr20 32823764 32823789 -33844216 + (GA)n Simple_repeat Simple_repeat 2 26 0 21 0 0 0 chr20 32823789 32823810 -33844195 + AT_rich Low_complexity Low_complexity 1 21 0 198 71 0 0 chr20 32823933 32823961 -33844044 + (GTTTG)n Simple_repeat Simple_repeat 5 32 0 1385 187 60 8 chr20 32823962 32824230 -33843775 - AluJo SINE Alu -25 287 6 259 290 60 103 chr20 32824273 32824525 -33843480 - L2 LINE L2 -1 3312 3072 382 310 88 12 chr20 32824593 32824764 -33843241 + MIR SINE MIR 71 254 -8 383 376 75 38 chr20 32824846 32825192 -33842813 - L2 LINE L2 -93 3179 2821 2817 217 39 24 chr20 32825262 32825925 -33842080 + L1ME2 LINE L1 5466 6138 -26 285 277 120 5 chr20 32826451 32826635 -33841370 + L1MC4 LINE L1 7836 8040 -2 221 322 27 20 chr20 32826649 32826795 -33841210 - L2 LINE L2 -615 2699 2553 244 198 27 155 chr20 32827877 32827952 -33840053 - MER113 DNA MER1_type? -328 193 155 2326 93 3 0 chr20 32827952 32828264 -33839741 + AluSp SINE Alu 1 313 0 244 198 27 155 chr20 32828264 32828375 -33839630 - MER113 DNA MER1_type? -366 155 31 523 264 20 27 chr20 32828434 32828582 -33839423 + MIR SINE MIR 16 162 -100 2156 115 23 0 chr20 32828636 32828941 -33839064 + AluSx SINE Alu 1 312 0 363 44 0 0 chr20 32829057 32829102 -33838903 + (TG)n Simple_repeat Simple_repeat 1 45 0 344 268 42 77 chr20 32829252 32829420 -33838585 + L2 LINE L2 3150 3311 -2 218 234 31 16 chr20 32830207 32830271 -33837734 - MIR SINE MIR -117 145 81 301 280 9 9 chr20 32830363 32830470 -33837535 + GA-rich Low_complexity Low_complexity 2 108 0 393 250 0 20 chr20 32830693 32831101 -33836904 + C-rich Low_complexity Low_complexity 1 399 0 212 136 0 45 chr20 32831782 32831826 -33836179 + L2 LINE L2 3149 3190 -82 262 316 255 5 chr20 32832154 32832546 -33835459 - L1ME4a LINE L1 -23 6098 5609 341 258 54 11 chr20 32832653 32832746 -33835259 - MIR3 SINE MIR -45 163 67 300 258 0 56 chr20 32832862 32832951 -33835054 - MER117 DNA MER1_type -47 150 67 386 311 36 9 chr20 32833197 32833357 -33834648 + MIR SINE MIR 3 164 -58 217 186 0 0 chr20 32833360 32833403 -33834602 + MIR SINE MIR 108 150 -112 330 87 0 0 chr20 32833543 32833589 -33834416 + (TC)n Simple_repeat Simple_repeat 1 46 0 264 316 44 0 chr20 32834485 32834599 -33833406 - L2 LINE L2 -277 3036 2918 1626 149 0 44 chr20 32834723 32835019 -33832986 - AluSx SINE Alu -13 299 17 302 313 45 1 chr20 32835063 32835206 -33832799 - MIR SINE MIR -35 173 20 360 328 69 11 chr20 32835941 32836130 -33831875 + MIR SINE MIR 3 202 -60 674 242 12 6 chr20 32836309 32836474 -33831531 - MIR SINE MIR -48 214 49 182 221 105 58 chr20 32837201 32837287 -33830718 - L2 LINE L2 -33 3239 3150 254 346 55 0 chr20 32837330 32837457 -33830548 - L2 LINE L2 -213 3059 2926 712 237 95 14 chr20 32837763 32837974 -33830031 - MIR SINE MIR -6 256 29 502 286 23 0 chr20 32838069 32838202 -33829803 - L2 LINE L2 0 3272 3137 207 246 0 33 chr20 32838149 32838210 -33829795 - MER91 DNA MER1_type -61 135 77 * 264 59 0 0 chr20 32838545 32838579 -33829426 + (TC)n Simple_repeat Simple_repeat 2 35 0 424 289 65 35 chr20 32838772 32839004 -33829001 - L2 LINE L2 -220 3052 2814 2424 65 0 16 chr20 32839108 32839418 -33828587 + AluY SINE Alu 1 305 -6 710 264 40 0 chr20 32839418 32839592 -33828413 - MIR SINE MIR -5 257 77 237 276 118 47 chr20 32840222 32840392 -33827613 + MIR SINE MIR 21 202 -60 781 201 218 0 chr20 32840399 32840578 -33827427 - MER20 DNA MER1_type 0 219 2 687 252 13 0 chr20 32840890 32841048 -33826957 - LTR16C LTR ERVL -37 454 295 293 159 128 141 chr20 32841048 32841248 -33826757 - LTR41 LTR ERVL 0 795 577 673 235 56 0 chr20 32841538 32841700 -33826305 - LTR41 LTR ERVL -586 187 17 821 271 21 5 chr20 32841704 32841892 -33826113 - LTR16C LTR ERVL -192 299 109 192 159 0 188 chr20 32841892 32841961 -33826044 - MIR3 SINE MIR -141 67 12 2300 109 0 0 chr20 32842775 32843088 -33824917 + AluSq SINE Alu 1 313 0 2024 233 184 22 chr20 32843754 32844565 -33823440 - L2 LINE L2 -338 2976 2035 258 293 85 12 chr20 32844821 32844903 -33823102 - MIR3 SINE MIR -27 181 94 333 298 111 18 chr20 32845122 32845293 -33822712 + MIR SINE MIR 65 251 -11 375 250 69 0 chr20 32845437 32845553 -33822452 + MIR3 SINE MIR 56 179 -29 2036 198 35 21 chr20 32845888 32846318 -33821687 + MER63B DNA MER1_type 1 436 0 2147 118 0 3 chr20 32846592 32846898 -33821107 - AluSx SINE Alu -6 306 2 1564 176 10 20 chr20 32847232 32847538 -33820467 + AluJb SINE Alu 1 303 -9 2131 121 0 6 chr20 32848609 32848923 -33819082 + AluSx SINE Alu 1 312 0 1928 113 18 70 chr20 32849000 32849328 -33818677 + AluSx SINE Alu 1 311 -1 826 155 32 11 chr20 32849328 32849614 -33818391 + GA-rich Low_complexity Low_complexity 1 292 0 252 184 0 0 chr20 32849628 32849677 -33818328 + GA-rich Low_complexity Low_complexity 2 50 0 533 208 145 44 chr20 32849710 32849869 -33818136 - MER5B DNA MER1_type -3 175 1 1246 159 53 0 chr20 32850208 32850416 -33817589 - MER20 DNA MER1_type 0 219 1 1898 159 10 0 chr20 32850602 32850897 -33817108 - AluSx SINE Alu -14 298 1 635 215 46 57 chr20 32851484 32851702 -33816303 + MIR SINE MIR 39 250 -12 312 27 0 0 chr20 32851710 32851747 -33816258 + (TGGA)n Simple_repeat Simple_repeat 4 40 0 347 310 58 18 chr20 32852192 32852363 -33815642 - MIR SINE MIR -20 242 65 186 133 0 0 chr20 32852455 32852485 -33815520 + (T)n Simple_repeat Simple_repeat 1 30 0 346 200 0 0 chr20 32852706 32852771 -33815234 - U6 snRNA snRNA -42 65 1 208 190 69 0 chr20 32852775 32852833 -33815172 - MIR SINE MIR -61 147 86 516 290 161 0 chr20 32853217 32853410 -33814595 + MIR SINE MIR 28 251 -11 277 270 54 0 chr20 32853827 32853938 -33814067 - AluSg/x SINE Alu 0 302 186 524 279 173 0 chr20 32853993 32854172 -33813833 + MIR SINE MIR 47 256 -6 2152 118 0 3 chr20 32854260 32854564 -33813441 - AluJb SINE Alu -9 303 1 228 269 111 19 chr20 32855249 32855357 -33812648 - L3 LINE CR1 -216 1361 1244 461 250 0 66 chr20 32855424 32855560 -33812445 - MER117 DNA MER1_type -29 168 42 265 272 35 97 chr20 32856209 32856562 -33811443 - L2 LINE L2 -94 3178 2776 1513 249 74 3 chr20 32856934 32857312 -33810693 - MLT1K LTR MaLR -4 584 180 347 258 150 0 chr20 32857456 32857576 -33810429 - MIR SINE MIR -97 165 28 272 299 43 17 chr20 32858167 32858284 -33809721 + Charlie8 DNA MER1_type 156 275 -2142 466 183 148 9 chr20 32858355 32858470 -33809535 + L2 LINE L2 3183 3313 0 198 150 0 0 chr20 32858763 32858803 -33809202 + (CA)n Simple_repeat Simple_repeat 2 41 0 2385 82 0 0 chr20 32858985 32859291 -33808714 - AluY SINE Alu -3 308 3 473 288 47 6 chr20 32859294 32859464 -33808541 + Charlie8 DNA MER1_type 97 273 -2144 436 257 18 33 chr20 32859975 32860154 -33807851 + MIR SINE MIR 3 170 -51 354 226 148 0 chr20 32860714 32860829 -33807176 + MIR SINE MIR 22 153 -55 249 57 0 0 chr20 32860887 32860922 -33807083 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 1118 253 44 36 chr20 32860924 32861268 -33806737 - L2 LINE L2 -15 3298 2949 2789 104 53 19 chr20 32861268 32861308 -33806697 - MSTA LTR MaLR -1 427 390 2152 115 0 16 chr20 32861308 32861620 -33806385 + AluSq SINE Alu 1 307 -6 2789 104 53 19 chr20 32861620 32861992 -33806013 - MSTA LTR MaLR -38 390 1 1118 253 44 36 chr20 32861992 32862058 -33805947 - L2 LINE L2 -364 2949 2885 569 209 3 23 chr20 32862115 32862466 -33805539 + (CA)n Simple_repeat Simple_repeat 1 344 0 936 108 0 32 chr20 32862478 32862664 -33805341 + (CA)n Simple_repeat Simple_repeat 1 180 0 422 300 20 0 chr20 32862689 32862789 -33805216 + L2 LINE L2 3169 3270 -2 278 252 130 65 chr20 32862901 32863024 -33804981 + L2 LINE L2 3141 3271 -1 407 316 0 9 chr20 32863087 32863201 -33804804 + MIR SINE MIR 48 160 -102 546 268 56 51 chr20 32863827 32864068 -33803937 + MIR SINE MIR 2 253 -9 474 303 13 26 chr20 32864948 32865100 -33802905 + LTR16C LTR ERVL 211 360 -131 871 203 0 0 chr20 32865125 32865318 -33802687 - FRAM SINE Alu 0 193 1 705 194 14 0 chr20 32865320 32865464 -33802541 + LTR16C LTR ERVL 346 491 0 2235 109 0 3 chr20 32866055 32866368 -33801637 - AluSx SINE Alu 0 312 1 251 200 0 86 chr20 32866445 32866515 -33801490 - MIR3 SINE MIR -52 156 93 2278 92 0 0 chr20 32867026 32867329 -33800676 + AluSg SINE Alu 1 303 -7 484 255 0 0 chr20 32867704 32867810 -33800195 + MIR SINE MIR 47 152 -110 541 303 98 8 chr20 32867812 32868046 -33799959 - MIR SINE MIR -3 259 5 29 0 0 0 chr20 32868116 32868145 -33799860 + AT_rich Low_complexity Low_complexity 1 29 0 726 280 12 32 chr20 32868710 32868960 -33799045 + MIR SINE MIR 5 249 -13 1736 166 4 0 chr20 32869805 32870082 -33797923 + AluJb SINE Alu 13 290 -22 613 256 156 0 chr20 32870129 32870309 -33797696 - MIR SINE MIR -7 255 48 242 259 105 31 chr20 32870301 32870463 -33797542 - L2 LINE L2 -315 2998 2825 * 200 355 8 16 chr20 32870791 32870912 -33797093 + L2 LINE L2 2715 2834 -480 296 321 48 36 chr20 32870945 32871110 -33796895 + L2 LINE L2 2933 3099 -173 930 286 100 30 chr20 32871218 32871658 -33796347 + L2 LINE L2 2843 3313 0 326 278 9 26 chr20 32872153 32872268 -33795737 + Charlie8 DNA MER1_type 29 141 -2276 325 203 0 76 chr20 32872273 32872352 -33795653 - MLT1C LTR MaLR 0 467 395 1807 180 0 3 chr20 32872353 32872642 -33795363 + AluJb SINE Alu 4 291 -21 2029 131 3 3 chr20 32872661 32872952 -33795053 + AluSx SINE Alu 14 304 -8 879 147 90 0 chr20 32872964 32873120 -33794885 + FAM SINE Alu 5 174 -1 296 239 78 0 chr20 32873414 32873516 -33794489 - MIR SINE MIR -59 149 49 339 287 69 0 chr20 32873937 32874038 -33793967 - MIR SINE MIR -67 141 34 295 269 8 85 chr20 32874130 32874215 -33793790 + MIR SINE MIR 66 139 -123 2333 111 0 0 chr20 32874215 32874513 -33793492 + AluSx SINE Alu 1 298 -14 295 269 8 85 chr20 32874513 32874557 -33793448 + MIR SINE MIR 139 185 -77 462 283 95 95 chr20 32874642 32874741 -33793264 - Charlie8 DNA MER1_type -1926 491 393 2245 127 0 3 chr20 32874741 32875049 -33792956 - AluSx SINE Alu -5 307 1 462 283 95 95 chr20 32875049 32875348 -33792657 - Charlie8 DNA MER1_type -2023 394 93 2289 117 3 0 chr20 32875638 32875947 -33792058 - AluSx SINE Alu -2 310 1 597 285 16 16 chr20 32876121 32876314 -33791691 + MIR SINE MIR 51 243 -19 366 314 11 29 chr20 32876420 32876450 -33791555 + GA-rich Low_complexity Low_complexity 2 31 -142 2111 109 7 0 chr20 32876450 32876724 -33791281 + AluSx SINE Alu 5 280 -32 366 314 11 29 chr20 32876724 32876868 -33791137 + GA-rich Low_complexity Low_complexity 31 173 0 751 299 18 5 chr20 32877171 32877392 -33790613 + MIR SINE MIR 35 258 -4 353 292 30 0 chr20 32877668 32877782 -33790223 - MIR SINE MIR -62 146 35 1073 136 6 19 chr20 32877913 32878075 -33789930 + AluSg/x SINE Alu 119 278 -32 260 309 25 0 chr20 32878511 32878592 -33789413 + MIR SINE MIR 148 230 -32 501 228 107 7 chr20 32878715 32878864 -33789141 - MIR SINE MIR -77 185 22 894 234 73 5 chr20 32878951 32879169 -33788836 - MIR SINE MIR -27 235 3 369 209 23 0 chr20 32879201 32879287 -33788718 - MIR SINE MIR -87 121 34 2037 130 51 23 chr20 32879536 32879890 -33788115 - THE1B LTR MaLR 0 364 1 2139 123 14 0 chr20 32881019 32881312 -33786693 + AluY SINE Alu 1 297 -14 907 137 0 0 chr20 32881606 32881730 -33786275 + FLAM_C SINE Alu 1 124 -19 258 262 167 13 chr20 32881978 32882215 -33785790 - MER102b DNA MER1_type 0 341 58 304 215 63 0 chr20 32882218 32882297 -33785708 - LTR16C LTR ERVL 0 491 408 300 268 71 18 chr20 32882420 32882532 -33785473 + L2 LINE L2 3136 3253 -19 366 211 40 0 chr20 32882595 32882671 -33785334 - MIR SINE MIR -87 121 43 202 150 25 0 chr20 32883822 32883862 -33784143 - MIR SINE MIR -116 146 106 410 268 121 32 chr20 32883925 32884082 -33783923 - MIR SINE MIR -76 186 16 327 234 13 0 chr20 32884486 32884563 -33783442 + MIR SINE MIR 72 149 -113 2127 90 0 60 chr20 32884573 32884894 -33783111 + AluSg SINE Alu 1 303 0 416 301 30 0 chr20 32885426 32885559 -33782446 - MER91C DNA MER1_type -3 137 1 269 310 94 29 chr20 32885584 32885755 -33782250 - L2 LINE L2 0 3272 3091 888 129 18 0 chr20 32887801 32887971 -33780034 + (TGGA)n Simple_repeat Simple_repeat 3 175 0 712 111 17 44 chr20 32887992 32888173 -33779832 + (TGGA)n Simple_repeat Simple_repeat 2 177 0 476 271 75 45 chr20 32888528 32888620 -33779385 + L1ME4a LINE L1 5585 5673 -448 2473 84 13 10 chr20 32888620 32888931 -33779074 + AluSx SINE Alu 1 312 0 476 271 75 45 chr20 32888931 32889104 -33778901 + L1ME4a LINE L1 5673 5858 -263 1739 191 0 10 chr20 32889172 32889471 -33778534 + AluJb SINE Alu 1 296 -16 247 270 87 48 chr20 32889473 32889599 -33778406 + L1ME4a LINE L1 5990 6120 -1 775 318 59 27 chr20 32889652 32889806 -33778199 - L2 LINE L2 -76 3237 3089 2087 130 7 0 chr20 32889806 32890099 -33777906 + AluSx SINE Alu 1 295 -17 775 318 59 27 chr20 32890099 32890459 -33777546 - L2 LINE L2 -224 3089 2705 624 128 0 0 chr20 32890464 32890558 -33777447 - FLAM_A SINE Alu -11 131 38 189 268 54 0 chr20 32890857 32890913 -33777092 - MIR SINE MIR -98 164 106 203 167 0 0 chr20 32890918 32890954 -33777051 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 253 265 186 10 chr20 32891071 32891173 -33776832 + MIR SINE MIR 39 158 -104 253 65 0 43 chr20 32891177 32891223 -33776782 + (GGA)n Simple_repeat Simple_repeat 2 45 0 2000 142 21 0 chr20 32891842 32892131 -33775874 + AluSx SINE Alu 1 295 -17 778 251 24 10 chr20 32892380 32892587 -33775418 - MIR SINE MIR -44 218 3 1358 167 53 18 chr20 32892668 32892896 -33775109 + AluJo SINE Alu 65 300 -12 2061 148 3 0 chr20 32894221 32894519 -33773486 - AluJb SINE Alu -13 299 1 186 253 48 24 chr20 32894608 32894691 -33773314 + L2 LINE L2 2708 2792 -522 416 326 142 35 chr20 32894806 32895091 -33772914 + L2 LINE L2 2839 3187 -126 2028 144 20 0 chr20 32895091 32895389 -33772616 + AluSx SINE Alu 1 304 -8 416 326 142 35 chr20 32895389 32895532 -33772473 + L2 LINE L2 3187 3313 0 236 297 42 42 chr20 32895620 32895738 -33772267 + MIR3 SINE MIR 42 159 -49 190 319 134 17 chr20 32896098 32896217 -33771788 + L2 LINE L2 3181 3313 0 2174 135 0 0 chr20 32896286 32896589 -33771416 + AluSx SINE Alu 1 303 -9 2304 118 0 0 chr20 32896867 32897163 -33770842 - AluY SINE Alu -15 296 1 226 318 18 71 chr20 32897243 32897413 -33770592 + L2 LINE L2 2899 3059 -213 2103 114 35 0 chr20 32897690 32897979 -33770026 + AluSq SINE Alu 1 299 -14 2222 119 7 0 chr20 32898281 32898574 -33769431 + AluSx SINE Alu 1 295 -17 769 252 8 57 chr20 32898607 32898869 -33769136 - LTR43 LTR ERV1 -178 424 176 1283 158 0 33 chr20 32899835 32900050 -33767955 - AluJb SINE Alu -20 292 85 2069 128 0 0 chr20 32900138 32900412 -33767593 + AluSx SINE Alu 1 274 -38 2056 98 0 4 chr20 32900923 32901188 -33766817 + AluSg SINE Alu 41 304 -6 291 263 31 106 chr20 32901189 32901349 -33766656 - MER91B DNA MER1_type -39 151 4 387 325 30 6 chr20 32901743 32901912 -33766093 - MER5A DNA MER1_type -2 187 15 348 164 0 0 chr20 32902650 32902717 -33765288 - Alu SINE Alu 0 302 236 2564 63 0 0 chr20 32904168 32904471 -33763534 + AluY SINE Alu 1 303 -8 1961 151 0 35 chr20 32904756 32905073 -33762932 - AluJo SINE Alu -6 306 1 2089 145 0 7 chr20 32905081 32905384 -33762621 - AluSx SINE Alu -11 301 1 1852 172 3 3 chr20 32905613 32905909 -33762096 + AluJb SINE Alu 1 296 -16 252 59 0 0 chr20 32905912 32905946 -33762059 + (CA)n Simple_repeat Simple_repeat 2 35 0 1791 167 28 3 chr20 32906689 32906976 -33761029 + AluJb SINE Alu 1 294 -18 390 242 40 24 chr20 32906994 32907118 -33760887 - MIR SINE MIR -19 243 118 180 233 122 56 chr20 32907458 32907548 -33760457 + L2 LINE L2 3218 3313 0 2220 103 27 3 chr20 32908200 32908492 -33759513 + AluSg SINE Alu 1 299 -11 2214 114 7 13 chr20 32908852 32909160 -33758845 + AluSq SINE Alu 1 306 -7 2223 136 0 0 chr20 32909411 32909721 -33758284 - AluSx SINE Alu -2 310 1 318 278 54 108 chr20 32910012 32910139 -33757866 - MIR SINE MIR -12 250 141 2395 88 0 31 chr20 32910139 32910459 -33757546 + AluSx SINE Alu 1 310 -2 318 278 54 108 chr20 32910459 32910572 -33757433 - MIR SINE MIR -121 141 23 2212 103 7 13 chr20 32910719 32911019 -33756986 - AluSq SINE Alu -11 302 5 1776 178 0 13 chr20 32911425 32911734 -33756271 - AluJb SINE Alu -7 305 1 2214 115 3 13 chr20 32911752 32912064 -33755941 - AluSx SINE Alu -1 311 3 226 278 0 111 chr20 32913255 32913381 -33754624 - L2 LINE L2 -2 3311 3200 209 274 0 0 chr20 32913490 32913541 -33754464 + GA-rich Low_complexity Low_complexity 1 51 0 204 179 0 0 chr20 32913553 32913592 -33754413 + GA-rich Low_complexity Low_complexity 1 39 0 928 293 38 54 chr20 32914683 32915185 -33752820 + L1MEc LINE L1 38 531 -5865 2343 106 0 3 chr20 32915349 32915652 -33752353 + AluSx SINE Alu 1 302 -10 1328 290 102 26 chr20 32915682 32916419 -33751586 + L1MEc LINE L1 1202 1994 -4402 2605 198 55 10 chr20 32916622 32917222 -33750783 + L1MC4 LINE L1 7284 7910 -132 1731 171 3 13 chr20 32917300 32917604 -33750401 + AluJo SINE Alu 9 309 -3 311 261 61 35 chr20 32917605 32917720 -33750285 + L1MC5 LINE L1 7533 7650 -311 554 195 62 114 chr20 32917749 32917865 -33750140 + L1MC5 LINE L1 7640 7760 -201 2369 94 0 3 chr20 32917865 32918163 -33749842 - AluSg1 SINE Alu -12 297 1 554 195 62 114 chr20 32918163 32918246 -33749759 + L1MC5 LINE L1 7760 7846 -115 2410 92 3 0 chr20 32918246 32918550 -33749455 - AluSp SINE Alu -8 305 1 1547 169 41 69 chr20 32918552 32918871 -33749134 - AluJb SINE Alu -1 311 2 554 195 62 114 chr20 32918871 32918936 -33749069 + L1MC5 LINE L1 7847 7893 -68 2333 115 0 10 chr20 32918936 32919248 -33748757 - AluSx SINE Alu -3 309 1 554 195 62 114 chr20 32919248 32919286 -33748719 + L1MC5 LINE L1 7893 7931 -30 557 314 66 4 chr20 32919310 32919536 -33748469 + MIR SINE MIR 22 261 -1 2289 122 0 0 chr20 32919713 32920016 -33747989 + AluSx SINE Alu 1 303 -9 2120 104 38 10 chr20 32920016 32920304 -33747701 + AluSg SINE Alu 1 296 -14 284 182 0 15 chr20 32920304 32920370 -33747635 + L1M4 LINE L1 4411 4475 -1671 588 128 0 0 chr20 32920381 32920467 -33747538 + FLAM_A SINE Alu 20 105 -37 835 272 66 15 chr20 32920919 32921296 -33746709 + L1MC4a LINE L1 5620 6017 -104 511 276 201 0 chr20 32921656 32921830 -33746175 - MIR SINE MIR 0 262 54 1448 163 8 61 chr20 32921972 32922236 -33745769 - AluJb SINE Alu -14 298 49 2379 93 7 0 chr20 32922267 32922567 -33745438 + AluSp SINE Alu 1 302 -11 1998 106 0 4 chr20 32922573 32922829 -33745176 + AluSc SINE Alu 39 293 -16 2513 70 0 19 chr20 32922878 32923191 -33744814 + AluY SINE Alu 1 307 -4 674 250 14 0 chr20 32923315 32923459 -33744546 + AluJo SINE Alu 6 151 -161 21 0 0 0 chr20 32923939 32923960 -33744045 + AT_rich Low_complexity Low_complexity 1 21 0 1776 168 3 3 chr20 32924696 32924982 -33743023 + AluJb SINE Alu 9 294 -18 384 280 26 16 chr20 32924988 32925111 -33742894 - MIR SINE MIR -62 146 52 2071 122 21 3 chr20 32925182 32925468 -33742537 + AluSx SINE Alu 1 291 -21 1153 140 4 123 chr20 32926590 32926826 -33741179 - AluJb SINE Alu -13 299 92 264 30 0 0 chr20 32926826 32926859 -33741146 + (TG)n Simple_repeat Simple_repeat 1 33 0 230 65 0 0 chr20 32926859 32926890 -33741115 - Alu SINE Alu -182 120 90 228 67 0 0 chr20 32926890 32926920 -33741085 + (TG)n Simple_repeat Simple_repeat 2 31 0 236 62 0 0 chr20 32926963 32926995 -33741010 - Alu SINE Alu -182 120 89 638 194 0 40 chr20 32927005 32927129 -33740876 - AluJb SINE Alu -192 120 2 182 212 0 0 chr20 32927533 32927566 -33740439 + L2 LINE L2 3268 3300 -13 321 234 0 0 chr20 32927654 32927718 -33740287 - L2 LINE L2 -2 3270 3207 2074 123 34 0 chr20 32928238 32928530 -33739475 - AluSx SINE Alu -10 302 1 811 153 0 89 chr20 32928559 32928716 -33739289 + FLAM_C SINE Alu 1 143 0 257 163 225 0 chr20 32928716 32928796 -33739209 + L1M4 LINE L1 5179 5276 -870 2469 109 0 0 chr20 32928796 32929108 -33738897 + AluSx SINE Alu 1 312 0 185 300 0 20 chr20 32929310 32929360 -33738645 - L2 LINE L2 -25 3247 3199 1003 136 105 5 chr20 32929362 32929553 -33738452 - Tigger1 DNA MER2_type -1 2417 2208 1282 211 21 39 chr20 32929556 32929723 -33738282 - AluJo SINE Alu -30 282 120 2135 118 26 16 chr20 32929723 32930028 -33737977 + AluSg SINE Alu 1 308 -2 1282 211 21 39 chr20 32930028 32930139 -33737866 - AluJo SINE Alu -192 120 9 2873 97 0 83 chr20 32930139 32930623 -33737382 + Tigger1 DNA MER2_type 1255 1698 -720 748 80 0 0 chr20 32930629 32930729 -33737276 - Tigger1 DNA MER2_type -1238 1180 1081 743 186 0 0 chr20 32930731 32930849 -33737156 + FLAM_C SINE Alu 2 119 -24 6314 121 20 55 chr20 32930863 32931317 -33736688 - Tigger1 DNA MER2_type -1326 1092 624 2260 129 0 10 chr20 32931317 32931628 -33736377 - AluSx SINE Alu -4 308 1 6314 121 20 55 chr20 32931628 32932281 -33735724 - Tigger1 DNA MER2_type -1794 624 24 357 215 133 82 chr20 32932299 32932457 -33735548 - MIR SINE MIR -82 180 15 1239 169 24 127 chr20 32932635 32932966 -33735039 - AluYb8 SINE Alu -21 297 1 344 328 116 15 chr20 32933485 32933683 -33734322 + L1ME LINE L1 5585 5802 -319 259 230 118 22 chr20 32933683 32933818 -33734187 + L1MC5 LINE L1 7265 7412 -549 1539 142 106 4 chr20 32933903 32934149 -33733856 - AluJb SINE Alu -11 301 31 438 256 64 8 chr20 32934150 32934340 -33733665 + L1MC4 LINE L1 7643 7953 -89 2100 107 10 3 chr20 32934398 32934688 -33733317 + AluSg SINE Alu 1 292 -18 1103 181 69 104 chr20 32934732 32935088 -33732917 - L1MD3 LINE L1 -5 8037 7708 2013 129 3 7 chr20 32935088 32935404 -33732601 - AluSx SINE Alu 0 315 1 1103 181 69 104 chr20 32935404 32935494 -33732511 - L1MD3 LINE L1 -334 7708 7616 668 163 21 7 chr20 32935536 32935677 -33732328 + L1MD3 LINE L1 7713 7855 -140 644 185 0 0 chr20 32935677 32935796 -33732209 - FLAM_C SINE Alu -2 141 23 344 131 0 0 chr20 32935838 32935899 -33732106 + L1MD3 LINE L1 7934 7994 -1 2243 132 0 0 chr20 32936075 32936386 -33731619 + AluSq SINE Alu 1 311 -2 1017 167 0 0 chr20 32936392 32936575 -33731430 + AluSg/x SINE Alu 134 316 0 2188 104 3 41 chr20 32936575 32936860 -33731145 + AluSq SINE Alu 1 274 -39 198 0 0 0 chr20 32936860 32936882 -33731123 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 2188 104 3 41 chr20 32936882 32936914 -33731091 + AluSq SINE Alu 274 306 -7 514 232 62 108 chr20 32936916 32937001 -33731004 + L1MC5 LINE L1 7703 7790 -171 1920 97 16 19 chr20 32937001 32937134 -33730871 + AluSq SINE Alu 1 134 -179 2427 79 3 7 chr20 32937134 32937439 -33730566 + AluSp SINE Alu 1 304 -9 1920 97 16 19 chr20 32937439 32937562 -33730443 + AluSq SINE Alu 134 256 -57 514 232 62 108 chr20 32937562 32937717 -33730288 + L1MC5 LINE L1 7790 7932 -29 1945 164 3 3 chr20 32938296 32938601 -33729404 + AluJo SINE Alu 1 305 -7 372 297 165 24 chr20 32938928 32939140 -33728865 - MIR SINE MIR -13 249 8 2394 87 7 0 chr20 32939740 32940038 -33727967 - AluSc SINE Alu -9 300 1 772 210 35 50 chr20 32940429 32940629 -33727376 - MER58A DNA MER1_type 0 224 28 1823 155 38 14 chr20 32940658 32940949 -33727056 + AluJb SINE Alu 1 298 -14 2259 103 3 7 chr20 32941461 32941761 -33726244 + AluSp SINE Alu 1 299 -14 553 159 0 0 chr20 32942053 32942141 -33725864 + L1MB3 LINE L1 5682 5769 -414 500 90 26 0 chr20 32942182 32942260 -33725745 + (TCTCCC)n Simple_repeat Simple_repeat 4 83 0 6080 69 20 23 chr20 32942260 32943559 -33724446 + SVA Other Other 1 1047 -339 2068 124 25 86 chr20 32943576 32943671 -33724334 + L1MB3 LINE L1 5762 5861 -322 2046 133 13 3 chr20 32943671 32943972 -33724033 + AluJb SINE Alu 1 304 -8 2068 124 25 86 chr20 32943972 32944318 -33723687 + L1MB3 LINE L1 5861 6176 -7 1882 175 16 7 chr20 32944646 32944949 -33723056 + AluJo SINE Alu 1 306 -6 747 142 59 47 chr20 32944967 32945136 -33722869 + MER3 DNA MER1_type 30 200 -9 2377 90 7 0 chr20 32945216 32945517 -33722488 + AluSp SINE Alu 1 303 -10 188 261 76 33 chr20 32945598 32945690 -33722315 - MIR SINE MIR -12 250 155 1648 83 4 54 chr20 32946025 32946267 -33721738 - MER30 DNA MER1_type 0 230 1 2273 114 3 0 chr20 32946556 32946854 -33721151 - AluSg SINE Alu -11 299 1 647 206 80 17 chr20 32946859 32947034 -33720971 - AluJo SINE Alu -7 305 120 329 248 157 33 chr20 32947431 32947552 -33720453 + MIR SINE MIR 119 254 -8 2218 112 36 10 chr20 32947824 32948128 -33719877 - AluSx SINE Alu 0 312 1 844 192 0 6 chr20 32948147 32948303 -33719702 - FRAM SINE Alu -2 174 20 590 162 95 20 chr20 32948322 32948470 -33719535 - L1MB3 LINE L1 -41 6142 5984 1810 167 31 0 chr20 32949002 32949290 -33718715 + AluJo SINE Alu 1 297 -15 2304 92 20 3 chr20 32949407 32949710 -33718295 + AluSx SINE Alu 1 308 -4 1398 158 5 0 chr20 32950074 32950276 -33717729 - AluJb SINE Alu -109 203 1 693 228 114 35 chr20 32950780 32950982 -33717023 - MIR SINE MIR -4 258 41 679 305 80 5 chr20 32951045 32951258 -33716747 - MIR SINE MIR -32 230 2 2030 155 3 0 chr20 32951386 32951683 -33716322 + AluSq SINE Alu 1 298 -15 752 267 22 50 chr20 32951741 32951892 -33716113 + L1MC/D LINE L1 5549 5690 -2118 2022 137 7 3 chr20 32951892 32952185 -33715820 + AluSx SINE Alu 6 299 -13 752 267 22 50 chr20 32952185 32952310 -33715695 + L1MC/D LINE L1 5690 5817 -1991 2003 168 3 0 chr20 32952321 32952625 -33715380 + AluJo SINE Alu 1 305 -7 246 311 139 87 chr20 32952915 32953281 -33714724 + L2 LINE L2 2861 3245 -27 1624 163 55 76 chr20 32953287 32953426 -33714579 - MER1B DNA MER1_type -2373 337 197 1690 148 3 74 chr20 32953426 32953737 -33714268 + AluJb SINE Alu 7 295 -17 1624 163 55 76 chr20 32953737 32953941 -33714064 - MER1B DNA MER1_type -2513 197 1 389 266 118 24 chr20 32954090 32954259 -33713746 + MIR SINE MIR 66 250 -12 1349 110 0 6 chr20 32954322 32954504 -33713501 + AluSg/x SINE Alu 114 294 -18 361 275 198 6 chr20 32954504 32954671 -33713334 + MIR SINE MIR 24 222 -40 699 315 16 20 chr20 32954751 32955002 -33713003 - MIR SINE MIR -10 252 3 509 165 32 205 chr20 32955300 32955614 -33712391 + MER33 DNA MER1_type 14 254 -2331 1451 144 4 32 chr20 32955614 32955864 -33712141 - AluJb SINE Alu -69 243 1 509 165 32 205 chr20 32955864 32955925 -33712080 + MER33 DNA MER1_type 254 324 0 929 271 115 34 chr20 32955927 32956422 -33711583 + L2 LINE L2 2217 2751 -563 2003 158 0 3 chr20 32956423 32956726 -33711279 + AluJb SINE Alu 1 302 -10 2433 92 0 16 chr20 32956727 32957042 -33710963 + AluSg SINE Alu 1 310 0 232 321 36 0 chr20 32957053 32957137 -33710868 + L2 LINE L2 2735 2821 -493 2200 105 3 14 chr20 32957140 32957436 -33710569 - AluSx SINE Alu -19 293 1 923 136 15 0 chr20 32957437 32957569 -33710436 - AluSq/x SINE Alu -178 134 1 1249 126 0 0 chr20 32957717 32957884 -33710121 - AluSg/x SINE Alu -6 306 140 1015 262 128 9 chr20 32957885 32958229 -33709776 + L2 LINE L2 2929 3313 0 986 173 26 58 chr20 32958239 32958281 -33709724 - LTR16C LTR ERVL 0 491 449 2225 116 0 0 chr20 32958281 32958575 -33709430 - AluSx SINE Alu -18 294 1 986 173 26 58 chr20 32958575 32958758 -33709247 - LTR16C LTR ERVL -42 449 273 1846 187 124 21 chr20 32958758 32959192 -33708813 + MLT2B1 LTR ERVL 1 479 -41 1873 157 0 17 chr20 32959200 32959337 -33708668 + AluJb SINE Alu 1 139 -173 1766 139 30 17 chr20 32959337 32959639 -33708366 + AluSx SINE Alu 1 306 -6 1873 157 0 17 chr20 32959639 32959800 -33708205 + AluJb SINE Alu 139 294 -18 1180 145 0 0 chr20 32959999 32960165 -33707840 - AluSg/x SINE Alu -16 294 129 2365 106 0 3 chr20 32960169 32960480 -33707525 - AluSx SINE Alu -1 311 2 1795 103 60 4 chr20 32960570 32960822 -33707183 + AluSx SINE Alu 29 294 -18 3033 157 71 15 chr20 32960973 32961507 -33706498 + MLT1F1 LTR MaLR 4 567 0 461 173 244 31 chr20 32962885 32963012 -33704993 + MER53 DNA DNA 36 189 0 1700 147 0 15 chr20 32963143 32963304 -33704701 - AluSx SINE Alu -19 293 136 2303 99 16 0 chr20 32963304 32963607 -33704398 - AluSx SINE Alu -4 308 1 1700 147 0 15 chr20 32963607 32963704 -33704301 - AluSx SINE Alu -176 136 39 1409 244 109 9 chr20 32964164 32964586 -33703419 + L2 LINE L2 2839 3302 -11 234 170 38 132 chr20 32964667 32964773 -33703232 + MIR SINE MIR 23 118 -90 702 314 122 29 chr20 32964957 32965706 -33702299 + L2 LINE L2 2352 3182 -90 431 175 91 71 chr20 32965754 32965908 -33702097 - MIR3 SINE MIR -11 197 41 2016 114 57 0 chr20 32966688 32966969 -33701036 - AluSg SINE Alu -13 297 1 1038 104 0 0 chr20 32966971 32967105 -33700900 - AluSq/x SINE Alu -178 134 1 1726 165 3 42 chr20 32967322 32967631 -33700374 + AluJo SINE Alu 1 297 -15 2489 84 3 7 chr20 32967637 32967947 -33700058 + AluSp SINE Alu 5 313 0 1966 149 0 10 chr20 32967987 32968288 -33699717 + AluSx SINE Alu 1 298 -14 493 297 41 41 chr20 32968374 32968640 -33699365 + MLT1J LTR MaLR 239 504 -7 353 364 6 6 chr20 32968788 32968950 -33699055 + (CA)n Simple_repeat Simple_repeat 2 163 0 950 119 0 0 chr20 32969051 32969177 -33698828 + AluSg SINE Alu 1 126 -184 2045 112 10 41 chr20 32969177 32969491 -33698514 + AluSx SINE Alu 1 304 -8 2115 115 7 0 chr20 32969511 32969799 -33698206 + AluSq SINE Alu 9 298 -15 657 247 53 68 chr20 32970126 32970199 -33697806 + MIR SINE MIR 68 141 -121 2021 113 0 28 chr20 32970199 32970335 -33697670 + AluSx SINE Alu 1 139 -170 2211 112 10 3 chr20 32970335 32970639 -33697366 + AluSx SINE Alu 1 306 -6 2021 113 0 28 chr20 32970639 32970819 -33697186 + AluSx SINE Alu 139 309 0 657 247 53 68 chr20 32970819 32970934 -33697071 + MIR SINE MIR 141 254 -8 272 304 188 7 chr20 32971038 32971176 -33696829 - MIR3 SINE MIR -22 186 24 217 226 75 0 chr20 32971263 32971316 -33696689 - L2 LINE L2 -18 3295 3239 432 183 0 0 chr20 32971863 32971934 -33696071 + MLT1J LTR MaLR 78 148 -363 1235 174 64 0 chr20 32971934 32972152 -33695853 - AluJb SINE Alu -12 300 69 2480 103 0 0 chr20 32972187 32972499 -33695506 + AluSx SINE Alu 1 312 0 1932 142 28 3 chr20 32972507 32972795 -33695210 + AluSx SINE Alu 1 295 -17 794 252 112 28 chr20 32973328 32973596 -33694409 + MLT1L LTR MaLR 27 271 -344 2382 109 0 0 chr20 32973596 32973900 -33694105 - AluSx SINE Alu -8 304 1 794 252 112 28 chr20 32973900 32974120 -33693885 + MLT1L LTR MaLR 271 615 0 2285 115 0 13 chr20 32974374 32974688 -33693317 + AluSx SINE Alu 1 310 -2 1117 181 6 0 chr20 32974695 32974877 -33693128 + AluJb SINE Alu 129 311 -1 463 244 8 38 chr20 32974886 32975006 -33692999 + MIR SINE MIR 31 148 -114 2330 109 3 3 chr20 32975006 32975318 -33692687 + AluSp SINE Alu 1 312 -1 2231 127 0 3 chr20 32975350 32975658 -33692347 + AluJo SINE Alu 1 307 -5 2476 82 3 3 chr20 32975837 32976143 -33691862 + AluSc SINE Alu 2 307 -2 1408 160 102 51 chr20 32976174 32976449 -33691556 + AluJb SINE Alu 1 289 -23 372 319 84 29 chr20 32976550 32976788 -33691217 + L2 LINE L2 3012 3262 -10 352 264 18 98 chr20 32977558 32977709 -33690296 + L2 LINE L2 3131 3270 -43 2412 103 3 0 chr20 32977709 32978021 -33689984 + AluSp SINE Alu 1 313 0 352 264 18 98 chr20 32978021 32978032 -33689973 + L2 LINE L2 3270 3280 -33 1589 148 21 103 chr20 32978068 32978206 -33689799 + AluJo SINE Alu 1 149 -163 1787 180 11 0 chr20 32978206 32978489 -33689516 - AluJb SINE Alu -26 286 1 1589 148 21 103 chr20 32978489 32978511 -33689494 + AluJo SINE Alu 149 171 -141 2276 92 0 7 chr20 32978511 32978804 -33689201 + AluSc SINE Alu 1 291 -18 1589 148 21 103 chr20 32978804 32978981 -33689024 + AluJo SINE Alu 171 311 -1 1881 173 0 7 chr20 32979054 32979360 -33688645 + AluJb SINE Alu 1 304 -8 347 198 19 66 chr20 32979391 32979466 -33688539 + MIR SINE MIR 72 142 -120 2088 121 0 55 chr20 32979466 32979796 -33688209 + AluSx SINE Alu 1 312 0 347 198 19 66 chr20 32979796 32979826 -33688179 + MIR SINE MIR 142 172 -90 2419 83 0 7 chr20 32979843 32980144 -33687861 + AluSx SINE Alu 1 299 -13 2295 103 30 0 chr20 32980156 32980456 -33687549 + AluSx SINE Alu 1 309 -3 2026 143 17 3 chr20 32980463 32980757 -33687248 + AluJb SINE Alu 3 300 -12 21 0 0 0 chr20 32980760 32980781 -33687224 + AT_rich Low_complexity Low_complexity 1 21 0 260 272 160 8 chr20 32980885 32981010 -33686995 + MIR SINE MIR 1 144 -118 229 327 118 13 chr20 32981289 32981442 -33686563 + L1MC/D LINE L1 5591 5759 -2049 418 208 17 50 chr20 32981457 32981577 -33686428 + L2 LINE L2 3156 3271 -1 921 189 6 0 chr20 32981590 32981749 -33686256 - FAM SINE Alu -9 40 1 2104 130 0 31 chr20 32981801 32982123 -33685882 + AluJb SINE Alu 1 312 0 1679 157 3 72 chr20 32982255 32982435 -33685570 - AluJo SINE Alu -16 296 105 2180 128 3 0 chr20 32982435 32982731 -33685274 + AluSq SINE Alu 1 297 -16 1927 149 33 0 chr20 32982740 32983042 -33684963 + AluSx SINE Alu 1 312 0 2073 111 76 0 chr20 32983046 32983334 -33684671 + AluSp SINE Alu 1 310 -3 1679 157 3 72 chr20 32983334 32983444 -33684561 - AluJo SINE Alu -218 94 12 1363 155 0 19 chr20 32983444 32983657 -33684348 - AluJb SINE Alu -17 295 87 216 277 5 130 chr20 32983831 32983957 -33684048 - MIR SINE MIR -6 256 158 2356 81 44 0 chr20 32983957 32984252 -33683753 - AluSx SINE Alu -4 308 1 216 277 5 130 chr20 32984252 32984309 -33683696 - MIR SINE MIR -103 159 96 2308 102 0 3 chr20 32984343 32984638 -33683367 + AluSx SINE Alu 2 295 -17 1922 147 3 14 chr20 32984652 32984937 -33683068 + AluJb SINE Alu 1 282 -30 555 230 120 11 chr20 32984986 32985142 -33682863 + MIR SINE MIR 32 214 -48 2514 67 0 3 chr20 32985142 32985439 -33682566 + AluSx SINE Alu 1 296 -16 555 230 120 11 chr20 32985439 32985473 -33682532 + MIR SINE MIR 214 243 -19 263 349 56 8 chr20 32986141 32986267 -33681738 - L2 LINE L2 -6 3307 3176 1405 190 77 0 chr20 32986273 32986547 -33681458 + AluJo SINE Alu 4 298 -14 2297 112 0 0 chr20 32986612 32986906 -33681099 - AluSx SINE Alu -18 294 1 2335 104 0 10 chr20 32986934 32987243 -33680762 - AluSq SINE Alu -7 306 1 366 263 53 9 chr20 32988243 32988357 -33679648 - MER117 DNA MER1_type -29 168 50 842 144 0 15 chr20 32988379 32988511 -33679494 - FLAM_C SINE Alu 0 133 4 251 282 82 18 chr20 32988542 32988652 -33679353 - MIR3 SINE MIR -44 164 48 2443 81 7 7 chr20 32988659 32988968 -33679037 - AluSx SINE Alu -3 309 1 2051 115 21 3 chr20 32988992 32989279 -33678726 + AluSx SINE Alu 1 292 -20 189 321 99 8 chr20 32989302 32989433 -33678572 + L2 LINE L2 3169 3311 -2 2543 65 3 0 chr20 32989589 32989897 -33678108 + AluY SINE Alu 1 309 -2 1853 153 43 13 chr20 32990236 32990357 -33677648 + AluJb SINE Alu 1 117 -195 2435 76 7 16 chr20 32990357 32990660 -33677345 + AluSg SINE Alu 1 300 -10 2328 105 0 0 chr20 32990660 32990954 -33677051 + AluSg SINE Alu 1 295 -15 1853 153 43 13 chr20 32990954 32991132 -33676873 + AluJb SINE Alu 116 310 -2 190 54 27 27 chr20 32991184 32991221 -33676784 + (TTTTA)n Simple_repeat Simple_repeat 5 41 0 192 319 0 0 chr20 32991536 32991608 -33676397 - MIR SINE MIR -71 137 66 2217 141 3 0 chr20 32991697 32992001 -33676004 + AluSx SINE Alu 3 307 -5 500 304 24 1 chr20 32992188 32992363 -33675642 - MIR SINE MIR -58 150 3 1801 146 45 0 chr20 32992907 32993174 -33674831 + AluJb SINE Alu 10 288 -24 348 74 0 0 chr20 32993318 32993372 -33674633 + L1MA3 LINE L1 6252 6305 0 1996 129 0 71 chr20 32993381 32993514 -33674491 + AluSx SINE Alu 3 144 -168 2292 110 3 16 chr20 32993514 32993831 -33674174 + AluSq SINE Alu 1 313 0 1996 129 0 71 chr20 32993831 32993850 -33674155 + AluSx SINE Alu 144 163 -149 2231 110 3 7 chr20 32993850 32994173 -33673832 + AluSq SINE Alu 1 313 0 1996 129 0 71 chr20 32994173 32994345 -33673660 + AluSx SINE Alu 163 305 -7 1077 152 12 0 chr20 32994345 32994509 -33673496 + AluSg/x SINE Alu 134 299 -13 662 304 74 0 chr20 32994766 32994996 -33673009 - MIR SINE MIR 0 262 16 391 229 50 43 chr20 32995016 32995156 -33672849 - MIR3 SINE MIR -34 174 34 333 229 127 0 chr20 32995419 32995537 -33672468 + MIR3 SINE MIR 75 207 -1 542 288 45 6 chr20 32995717 32995894 -33672111 + MIR SINE MIR 51 234 -28 231 260 180 0 chr20 32996245 32996345 -33671660 - MIR SINE MIR -111 151 34 25 31 0 0 chr20 32997071 32997103 -33670902 + GC_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr20 32997221 32997253 -33670752 + GC_rich Low_complexity Low_complexity 1 32 0 936 141 70 0 chr20 32997873 32998029 -33669976 + AluJb SINE Alu 138 304 -8 540 229 18 29 chr20 32998407 32998584 -33669421 + MIR SINE MIR 30 203 -59 642 191 95 0 chr20 32998718 32998844 -33669161 + AluJb SINE Alu 136 273 -39 385 256 73 22 chr20 32998853 32998990 -33669015 - MIR SINE MIR -115 147 4 2367 94 0 25 chr20 32999205 32999523 -33668482 + AluSg SINE Alu 1 310 0 1369 186 57 0 chr20 32999614 32999861 -33668144 + AluJo SINE Alu 40 300 -12 200 118 0 29 chr20 32999866 32999900 -33668105 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 247 245 0 0 chr20 33000338 33000391 -33667614 + (TG)n Simple_repeat Simple_repeat 1 53 0 1290 146 5 5 chr20 33000667 33000866 -33667139 + AluSx SINE Alu 1 199 -113 480 59 15 0 chr20 33000866 33000934 -33667071 + AluSc SINE Alu 65 133 -176 2414 71 3 10 chr20 33000935 33001231 -33666774 + AluY SINE Alu 1 294 -17 1565 114 0 0 chr20 33001420 33001630 -33666375 - AluSq SINE Alu 0 313 104 1478 116 0 5 chr20 33001634 33001833 -33666172 + AluSg/x SINE Alu 100 297 -13 910 90 0 0 chr20 33001834 33001945 -33666060 - AluSq SINE Alu -201 111 1 2141 121 4 0 chr20 33001948 33002270 -33665735 - AluSx SINE Alu 0 323 1 506 259 39 15 chr20 33002342 33002547 -33665458 - L1MEd LINE L1 -5003 1116 907 2375 92 0 48 chr20 33002548 33002727 -33665278 - AluSg SINE Alu -9 301 115 219 36 0 0 chr20 33002727 33002755 -33665250 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2161 107 0 4 chr20 33002755 33003035 -33664970 - AluSg SINE Alu -31 279 1 2375 92 0 48 chr20 33003035 33003170 -33664835 - AluSg SINE Alu -193 117 1 2247 80 0 10 chr20 33003212 33003500 -33664505 - AluSx SINE Alu -17 295 11 2295 119 0 3 chr20 33003613 33003924 -33664081 - AluSx SINE Alu -2 310 1 501 154 9 45 chr20 33003924 33004023 -33663982 - AluJo/FRAM SINE Alu -17 295 199 1553 175 90 65 chr20 33004023 33004240 -33663765 - MER66A LTR ERV1 -9 469 333 2020 128 31 7 chr20 33004240 33004528 -33663477 - AluSx SINE Alu -17 295 1 1553 175 90 65 chr20 33004528 33004768 -33663237 - MER66A LTR ERV1 -145 333 100 466 121 0 0 chr20 33004853 33004919 -33663086 - AluJ/FLAM SINE Alu -233 79 14 2525 67 0 0 chr20 33004990 33005288 -33662717 + AluY SINE Alu 1 298 -13 835 136 0 0 chr20 33005309 33005427 -33662578 - FLAM_C SINE Alu -25 118 1 256 26 53 0 chr20 33005434 33005472 -33662533 - MER41A LTR ERV1 -114 440 401 496 282 69 111 chr20 33005532 33005636 -33662369 - L1MEd LINE L1 -5460 659 552 2224 112 0 0 chr20 33005636 33005923 -33662082 + AluSg SINE Alu 1 287 -23 496 282 69 111 chr20 33005923 33005947 -33662058 - L1MEd LINE L1 -5567 552 529 2161 116 3 0 chr20 33005947 33006252 -33661753 + AluSq SINE Alu 1 306 0 496 282 69 111 chr20 33006252 33006414 -33661591 - L1MEd LINE L1 -5590 529 388 2304 124 3 0 chr20 33006414 33006721 -33661284 - AluSx SINE Alu -4 308 1 496 282 69 111 chr20 33006721 33006859 -33661146 - L1MEd LINE L1 -5731 388 246 2170 117 0 26 chr20 33006864 33007172 -33660833 + AluSg SINE Alu 1 300 -10 2443 74 0 3 chr20 33007172 33007468 -33660537 + AluY SINE Alu 1 295 -16 1995 155 3 10 chr20 33007480 33007784 -33660221 + AluSx SINE Alu 1 302 -10 839 200 0 32 chr20 33007821 33008006 -33659999 + AluJo SINE Alu 120 298 -14 2521 68 0 0 chr20 33008010 33008306 -33659699 + AluY SINE Alu 1 296 -15 2218 97 14 3 chr20 33008309 33008599 -33659406 + AluSx SINE Alu 1 293 -19 239 303 62 22 chr20 33008732 33008910 -33659095 - L2 LINE L2 -1065 2249 2065 2157 108 13 16 chr20 33009110 33009417 -33658588 + AluSq SINE Alu 3 308 -5 1201 103 13 0 chr20 33009576 33009732 -33658273 - AluSq SINE Alu -155 158 1 2224 112 0 0 chr20 33009756 33010043 -33657962 - AluSg SINE Alu -23 287 1 311 257 20 50 chr20 33010046 33010147 -33657858 + L1MEd LINE L1 562 659 -5460 256 26 53 0 chr20 33010207 33010245 -33657760 + MER41A LTR ERV1 401 440 -114 835 136 0 0 chr20 33010252 33010370 -33657635 + FLAM_C SINE Alu 1 118 -25 2145 94 0 4 chr20 33010391 33010668 -33657337 - AluSc SINE Alu -13 296 21 1451 123 9 0 chr20 33010770 33010981 -33657024 - AluSg SINE Alu -95 215 3 249 26 0 0 chr20 33010990 33011029 -33656976 - Alu SINE Alu 0 302 264 1659 179 47 3 chr20 33011029 33011326 -33656679 - AluJb SINE Alu -1 311 2 1005 215 13 18 chr20 33011687 33011851 -33656154 - AluJo SINE Alu 0 312 148 2414 92 7 0 chr20 33011851 33012155 -33655850 - AluSx SINE Alu -6 306 1 1005 215 13 18 chr20 33012155 33012218 -33655787 - AluJo SINE Alu -164 148 86 825 135 0 0 chr20 33012413 33012524 -33655481 + AluSq/x SINE Alu 5 115 -198 2129 90 0 14 chr20 33012525 33012659 -33655346 + AluSc SINE Alu 1 135 -174 2581 46 0 13 chr20 33012659 33012963 -33655042 + AluY SINE Alu 1 300 -11 2129 90 0 14 chr20 33012963 33013105 -33654900 + AluSc SINE Alu 135 273 -36 258 210 16 0 chr20 33013106 33013168 -33654837 - AluSp/q SINE Alu -8 295 233 1396 92 0 6 chr20 33013268 33013441 -33654564 - AluSx SINE Alu -140 172 1 356 302 17 34 chr20 33013467 33013604 -33654401 + MIR SINE MIR 19 152 -62 202 288 91 0 chr20 33013791 33013857 -33654148 - L2 LINE L2 -6 3307 3236 1558 208 20 3 chr20 33014225 33014356 -33653649 + AluJb SINE Alu 5 132 -180 2369 88 3 13 chr20 33014356 33014662 -33653343 + AluSx SINE Alu 1 303 -9 1558 208 20 3 chr20 33014662 33014828 -33653177 + AluJb SINE Alu 132 307 -5 1125 149 11 21 chr20 33015246 33015434 -33652571 + AluJb SINE Alu 110 295 -17 351 269 58 0 chr20 33015436 33015540 -33652465 + MIR SINE MIR 81 190 -72 1064 82 15 0 chr20 33015548 33015683 -33652322 + AluSx SINE Alu 1 137 -176 2498 72 0 13 chr20 33015683 33015990 -33652015 + AluY SINE Alu 1 303 -8 2267 121 0 0 chr20 33015993 33016300 -33651705 + AluSg SINE Alu 1 307 -3 181 340 38 0 chr20 33016318 33016371 -33651634 + L2 LINE L2 3210 3264 -8 674 225 49 2 chr20 33016470 33016653 -33651352 + MIR SINE MIR 4 192 -50 210 231 0 0 chr20 33016685 33016724 -33651281 + (CTA)n Simple_repeat Simple_repeat 2 40 0 1076 116 0 0 chr20 33016878 33017024 -33650981 + AluSx SINE Alu 141 286 -26 584 244 23 0 chr20 33017033 33017164 -33650841 - MER5A DNA MER1_type -55 134 1 216 67 0 0 chr20 33017417 33017447 -33650558 + (CA)n Simple_repeat Simple_repeat 2 31 0 1821 170 0 0 chr20 33017947 33018229 -33649776 + AluJb SINE Alu 1 282 -30 2172 143 0 0 chr20 33018229 33018529 -33649476 - AluSx SINE Alu -12 300 1 1907 140 16 29 chr20 33018560 33018867 -33649138 + AluSq SINE Alu 1 303 -10 2046 111 4 0 chr20 33018867 33019137 -33648868 + AluY SINE Alu 1 272 -39 452 133 12 0 chr20 33019137 33019220 -33648785 + GA-rich Low_complexity Low_complexity 1 84 0 474 18 0 0 chr20 33019220 33019275 -33648730 + (GGAA)n Simple_repeat Simple_repeat 1 55 0 339 306 148 14 chr20 33019308 33019524 -33648481 - MIR SINE MIR -16 246 2 281 321 121 0 chr20 33020327 33020492 -33647513 + L1MC/D LINE L1 5587 5771 -2037 237 327 0 67 chr20 33020542 33020646 -33647359 + MER110A LTR ERV1 74 170 -298 2314 95 14 0 chr20 33020771 33021067 -33646938 - AluSx SINE Alu -12 300 1 1323 157 0 14 chr20 33021069 33021279 -33646726 - AluJo SINE Alu -19 293 87 1861 140 53 0 chr20 33021288 33021573 -33646432 - AluSp SINE Alu -13 300 1 2338 103 0 10 chr20 33021590 33021901 -33646104 - AluSx SINE Alu -4 308 1 1398 119 10 5 chr20 33022014 33022216 -33645789 + AluSq SINE Alu 33 235 -78 2209 121 3 0 chr20 33022257 33022546 -33645459 + AluSx SINE Alu 7 296 -16 1512 149 4 4 chr20 33022560 33022788 -33645217 + AluSx SINE Alu 14 241 -71 2260 119 7 0 chr20 33022812 33023114 -33644891 + AluSx SINE Alu 5 308 -4 2132 102 10 3 chr20 33023114 33023407 -33644598 + AluSq SINE Alu 1 295 -18 279 79 0 0 chr20 33023407 33023445 -33644560 + (TA)n Simple_repeat Simple_repeat 2 39 0 300 264 133 19 chr20 33023646 33023729 -33644276 - MIR SINE MIR 0 262 190 1474 153 127 8 chr20 33023729 33023997 -33644008 - AluSg SINE Alu -10 300 1 300 264 133 19 chr20 33023997 33024082 -33643923 - MIR SINE MIR -72 190 69 581 210 59 0 chr20 33024519 33024638 -33643367 + AluJo SINE Alu 117 242 -70 429 241 134 43 chr20 33024839 33025026 -33642979 - MIR SINE MIR 0 262 59 1666 199 22 22 chr20 33025218 33025529 -33642476 + AluJo SINE Alu 1 311 -1 2297 120 3 0 chr20 33025785 33026094 -33641911 - AluSg SINE Alu 0 310 1 1706 97 0 44 chr20 33026099 33026347 -33641658 - AluSc SINE Alu 0 309 73 1862 124 0 22 chr20 33026486 33026761 -33641244 + AluSx SINE Alu 14 282 -30 842 161 40 81 chr20 33026808 33026834 -33641171 - FAM SINE Alu -141 170 144 2175 141 0 0 chr20 33026834 33027132 -33640873 + AluSx SINE Alu 1 298 -14 842 161 40 81 chr20 33027132 33027279 -33640726 - FAM SINE Alu -167 144 4 488 265 230 20 chr20 33027538 33027742 -33640263 + L2 LINE L2 2973 3219 -94 1112 115 0 19 chr20 33027742 33027899 -33640106 - FRAM SINE Alu -7 169 16 23 0 0 0 chr20 33027905 33027928 -33640077 + AT_rich Low_complexity Low_complexity 1 23 0 1979 138 0 3 chr20 33027931 33028246 -33639759 + AluSx SINE Alu 1 314 0 260 272 98 132 chr20 33028455 33028606 -33639399 + L2 LINE L2 2996 3134 -138 1669 201 0 0 chr20 33028606 33028889 -33639116 - AluJb SINE Alu -23 289 7 260 272 98 132 chr20 33028889 33029024 -33638981 + L2 LINE L2 3134 3272 0 2015 156 3 3 chr20 33029201 33029509 -33638496 + AluSx SINE Alu 1 308 -4 311 182 23 45 chr20 33029593 33029681 -33638324 - MER58 DNA MER1_type -115 226 141 350 304 17 9 chr20 33029781 33029896 -33638109 + MIR SINE MIR 84 199 -63 260 305 247 0 chr20 33030595 33030749 -33637256 + MIR SINE MIR 71 262 0 2012 123 26 32 chr20 33030789 33030923 -33637082 + AluSg SINE Alu 1 134 -176 2472 80 6 10 chr20 33030923 33031236 -33636769 + AluSq SINE Alu 1 312 -1 2012 123 26 32 chr20 33031236 33031411 -33636594 + AluSg SINE Alu 134 308 -2 813 184 162 0 chr20 33031413 33031592 -33636413 - MER3 DNA MER1_type -1 208 1 340 203 0 13 chr20 33031716 33031795 -33636210 - Tigger7 DNA MER2_type -7 2484 2407 1105 295 127 34 chr20 33032337 33032751 -33635254 + L2 LINE L2 2325 2699 -614 1702 170 35 14 chr20 33032751 33032880 -33635125 + AluJo SINE Alu 1 126 -186 2402 92 0 0 chr20 33032880 33033175 -33634830 + AluSg SINE Alu 1 295 -15 1702 170 35 14 chr20 33033175 33033328 -33634677 + AluJo SINE Alu 126 289 -23 1105 295 127 34 chr20 33033328 33033593 -33634412 + L2 LINE L2 2699 2938 -375 2507 76 3 0 chr20 33033593 33033896 -33634109 + AluSx SINE Alu 1 304 -8 1105 295 127 34 chr20 33033896 33034096 -33633909 + L2 LINE L2 2938 3286 -27 194 325 171 0 chr20 33034122 33034245 -33633760 - MIR SINE MIR -29 233 90 183 311 83 30 chr20 33034701 33034732 -33633273 - L2 LINE L2 -435 2879 2851 2271 116 0 7 chr20 33034732 33035034 -33632971 + AluSq SINE Alu 1 300 -13 183 311 83 30 chr20 33035034 33035134 -33632871 - L2 LINE L2 -463 2851 2741 1915 143 7 0 chr20 33035150 33035461 -33632544 - AluSx SINE Alu 0 313 1 2337 105 7 0 chr20 33035461 33035767 -33632238 - AluSx SINE Alu -4 308 1 1873 133 25 11 chr20 33035796 33036127 -33631878 + AluSx SINE Alu 1 335 0 566 165 0 0 chr20 33036227 33036318 -33631687 - AluJ/FRAM SINE Alu -3 309 219 703 144 10 0 chr20 33036324 33036428 -33631577 - FLAM_C SINE Alu -30 113 9 2056 108 56 0 chr20 33036708 33036996 -33631009 + AluSp SINE Alu 2 305 -8 1829 118 38 38 chr20 33037738 33038027 -33629978 + AluSx SINE Alu 1 289 -23 2010 135 3 23 chr20 33038029 33038332 -33629673 + AluSx SINE Alu 1 297 -15 286 294 0 0 chr20 33038336 33038428 -33629577 - L1M4 LINE L1 -2313 3833 3742 2089 100 0 17 chr20 33038429 33038608 -33629397 - AluSc SINE Alu -1 308 134 2313 100 3 10 chr20 33038608 33038909 -33629096 - AluSq SINE Alu -14 299 1 2089 100 0 17 chr20 33038909 33039020 -33628985 - AluSc SINE Alu -175 134 23 914 173 0 0 chr20 33039038 33039177 -33628828 - AluJo SINE Alu -173 139 1 1764 189 3 17 chr20 33039192 33039488 -33628517 - AluJb SINE Alu -20 292 1 303 219 27 96 chr20 33039488 33039556 -33628449 - L1M4 LINE L1 -2662 3484 3430 2579 61 0 7 chr20 33039556 33039866 -33628139 - AluY SINE Alu -3 308 1 303 219 27 96 chr20 33039866 33039943 -33628062 - L1M4 LINE L1 -2716 3430 3349 747 72 62 0 chr20 33039944 33040041 -33627964 - AluSg SINE Alu -14 298 196 2448 92 3 0 chr20 33040041 33040346 -33627659 - AluSp SINE Alu -6 307 2 1535 107 0 0 chr20 33040347 33040543 -33627462 - AluSg SINE Alu -114 196 1 681 209 47 64 chr20 33040573 33040688 -33627317 + AluJo SINE Alu 2 115 -197 189 0 0 0 chr20 33040688 33040709 -33627296 + (CTA)n Simple_repeat Simple_repeat 1 21 0 681 209 47 64 chr20 33040709 33040765 -33627240 + AluJo SINE Alu 115 170 -142 2451 69 0 20 chr20 33040767 33041092 -33626913 - AluY SINE Alu 0 311 1 2129 118 11 0 chr20 33041100 33041387 -33626618 - AluSx SINE Alu -22 290 1 1411 128 0 5 chr20 33041402 33041606 -33626399 - AluJo SINE Alu -23 289 87 2168 110 31 0 chr20 33041841 33042131 -33625874 - AluSp SINE Alu -14 299 1 2230 134 0 0 chr20 33042155 33042461 -33625544 - AluSx SINE Alu -6 306 1 1554 177 0 71 chr20 33042491 33042813 -33625192 - AluJb SINE Alu -13 299 1 2071 128 3 32 chr20 33042921 33043094 -33624911 - AluSq SINE Alu -9 304 128 216 0 0 0 chr20 33043094 33043118 -33624887 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1915 128 4 0 chr20 33043118 33043399 -33624606 - AluSg SINE Alu -28 282 1 2009 96 6 57 chr20 33043399 33043713 -33624292 - AluSq SINE Alu -15 298 1 2071 128 3 32 chr20 33043713 33043850 -33624155 - AluSq SINE Alu -182 131 1 604 134 210 17 chr20 33043855 33043974 -33624031 - FLAM_C SINE Alu 0 143 2 191 100 0 25 chr20 33044400 33044440 -33623565 + (CGGGG)n Simple_repeat Simple_repeat 5 43 0 252 143 0 0 chr20 33044444 33044486 -33623519 + (CGG)n Simple_repeat Simple_repeat 1 42 0 25 0 0 0 chr20 33044592 33044617 -33623388 + GC_rich Low_complexity Low_complexity 1 25 0 393 263 137 26 chr20 33045067 33045257 -33622748 + MIR SINE MIR 22 232 -30 223 327 47 33 chr20 33045570 33045720 -33622285 - L2 LINE L2 -3 3310 3159 * 256 220 46 64 chr20 33045716 33045825 -33622180 - MIR SINE MIR -49 213 107 2216 116 0 23 chr20 33046063 33046224 -33621781 - AluSx SINE Alu -18 294 131 180 0 0 0 chr20 33046224 33046244 -33621761 + (TTTTA)n Simple_repeat Simple_repeat 4 23 0 2128 106 7 10 chr20 33046245 33046537 -33621468 - AluSq SINE Alu -22 291 1 2216 116 0 23 chr20 33046537 33046674 -33621331 - AluSx SINE Alu -180 132 1 373 147 15 0 chr20 33046703 33046771 -33621234 + MER41A LTR ERV1 398 466 -88 1831 162 20 0 chr20 33046864 33047166 -33620839 - AluJo SINE Alu -4 308 1 1139 122 50 22 chr20 33047227 33047408 -33620597 - AluSq SINE Alu -127 186 1 2379 112 0 0 chr20 33047418 33047731 -33620274 - AluSq SINE Alu 0 313 1 1247 205 26 33 chr20 33047853 33048156 -33619849 - AluJo SINE Alu -11 301 1 1996 142 10 6 chr20 33048225 33048536 -33619469 - AluSq SINE Alu -1 312 1 336 48 0 0 chr20 33048588 33048630 -33619375 + (TA)n Simple_repeat Simple_repeat 2 43 0 2685 46 0 0 chr20 33048630 33048936 -33619069 - AluY SINE Alu -5 306 1 2247 90 11 0 chr20 33048947 33049253 -33618752 - AluSp SINE Alu 0 309 1 272 250 12 25 chr20 33049300 33049380 -33618625 - Charlie7 DNA MER1_type -2507 105 27 1958 121 45 3 chr20 33049471 33049761 -33618244 + AluSq SINE Alu 1 302 -11 2128 97 10 27 chr20 33049761 33050061 -33617944 + AluSg SINE Alu 1 295 -15 674 241 44 49 chr20 33050101 33050304 -33617701 + MIR SINE MIR 30 231 -31 205 322 40 84 chr20 33050353 33050555 -33617450 - L2 LINE L2 -112 3160 2968 515 233 0 35 chr20 33051129 33051245 -33616760 + LTR33 LTR ERVL 6 117 -404 2464 93 3 0 chr20 33051347 33051657 -33616348 + AluSp SINE Alu 1 311 -2 419 243 28 28 chr20 33051741 33051885 -33616120 + LTR33 LTR ERVL 373 516 -5 2363 97 0 0 chr20 33051903 33052203 -33615802 - AluSc SINE Alu -9 300 1 690 233 0 0 chr20 33052204 33052337 -33615668 - AluJb SINE Alu -178 134 2 954 136 0 7 chr20 33052447 33052587 -33615418 - AluJb SINE Alu -173 139 1 2220 105 0 19 chr20 33052594 33052908 -33615097 - AluSq SINE Alu -5 308 1 968 120 60 0 chr20 33052965 33053115 -33614890 + FRAM SINE Alu 8 166 -10 2319 105 3 3 chr20 33053116 33053421 -33614584 + AluSq SINE Alu 1 305 -8 307 104 0 0 chr20 33054144 33054192 -33613813 + Alu SINE Alu 254 301 0 234 159 114 0 chr20 33054198 33054242 -33613763 - MIR SINE MIR -148 114 66 2082 114 27 0 chr20 33054312 33054610 -33613395 - AluSg1 SINE Alu -3 306 1 2106 123 3 22 chr20 33054972 33055288 -33612717 + AluSx SINE Alu 1 310 -2 2155 107 3 26 chr20 33056176 33056485 -33611520 - AluSx SINE Alu -10 302 1 804 154 24 0 chr20 33056502 33056625 -33611380 - AluJo SINE Alu -176 136 11 784 227 148 11 chr20 33056679 33056943 -33611062 - L1MC4 LINE L1 -886 7156 6857 2406 63 13 0 chr20 33056944 33057247 -33610758 - AluY SINE Alu -4 307 1 704 181 39 0 chr20 33057386 33057513 -33610492 - FLAM_C SINE Alu -10 133 2 1632 224 67 67 chr20 33057574 33058098 -33609907 - L1ME1 LINE L1 -32 6134 5608 2197 107 23 3 chr20 33058098 33058397 -33609608 - AluSx SINE Alu -7 305 1 1632 224 67 67 chr20 33058397 33058496 -33609509 - L1ME1 LINE L1 -557 5609 5511 204 349 71 24 chr20 33058726 33058852 -33609153 - MIR SINE MIR -66 196 65 2314 83 13 7 chr20 33059196 33059496 -33608509 + AluSp SINE Alu 1 302 -11 2071 155 10 0 chr20 33059503 33059812 -33608193 + AluSx SINE Alu 1 312 0 702 177 32 16 chr20 33059821 33059945 -33608060 + FLAM_C SINE Alu 2 127 -16 190 309 0 0 chr20 33061097 33061139 -33606866 - L2 LINE L2 -219 3053 3012 972 220 121 22 chr20 33061314 33061628 -33606377 - L1MC4 LINE L1 -1939 5869 5525 1931 144 14 0 chr20 33061798 33062089 -33605916 - AluSx SINE Alu -17 295 1 2434 71 37 11 chr20 33062123 33062474 -33605531 - L1PA13 LINE L1 0 6163 5804 2174 141 0 0 chr20 33062779 33063083 -33604922 + AluSx SINE Alu 1 304 -8 1929 144 0 4 chr20 33063240 33063517 -33604488 + AluSx SINE Alu 1 276 -36 7272 42 2 0 chr20 33063519 33063893 -33604112 - L1PA6 LINE L1 0 6154 5782 2505 64 3 6 chr20 33063893 33064205 -33603800 - AluY SINE Alu 0 311 1 7272 42 2 0 chr20 33064205 33065221 -33602784 - L1PA6 LINE L1 -372 5782 4763 1977 211 63 75 chr20 33065323 33065435 -33602570 - L1ME3A LINE L1 -5 6165 6053 1260 162 15 129 chr20 33065435 33065590 -33602415 + AluSx SINE Alu 5 102 -210 2116 112 7 3 chr20 33065590 33065884 -33602121 + AluSx SINE Alu 1 295 -17 1260 162 15 129 chr20 33065884 33066068 -33601937 + AluSx SINE Alu 102 305 -7 1977 211 63 75 chr20 33066068 33066445 -33601560 - L1ME3A LINE L1 -117 6053 5684 2382 80 0 7 chr20 33066445 33066746 -33601259 - AluY SINE Alu -12 299 1 1977 211 63 75 chr20 33066746 33066951 -33601054 - L1ME3A LINE L1 -486 5684 5478 2323 92 0 19 chr20 33067040 33067355 -33600650 - AluSg SINE Alu -1 309 1 453 95 0 16 chr20 33067355 33067418 -33600587 + AluSq SINE Alu 131 192 -121 1592 178 10 40 chr20 33067686 33067990 -33600015 + AluJb SINE Alu 1 295 -17 1376 272 52 44 chr20 33067995 33068330 -33599675 + MLT1J LTR MaLR 3 345 -166 2339 89 3 0 chr20 33068330 33068622 -33599383 + AluSq SINE Alu 1 293 -20 1376 272 52 44 chr20 33068622 33068789 -33599216 + MLT1J LTR MaLR 345 509 -2 2250 89 0 0 chr20 33069226 33069530 -33598475 + AluSg1 SINE Alu 1 304 0 212 374 12 12 chr20 33069876 33070047 -33597958 + C-rich Low_complexity Low_complexity 3 173 0 688 284 173 11 chr20 33070468 33070739 -33597266 + L2 LINE L2 2994 3308 -5 217 391 35 9 chr20 33070754 33070869 -33597136 - L2 LINE L2 -39 3233 3116 455 219 149 0 chr20 33071166 33071280 -33596725 + FLAM_C SINE Alu 1 131 -2 1795 152 62 3 chr20 33071289 33071579 -33596426 + AluJo SINE Alu 1 307 -5 2051 134 19 3 chr20 33071975 33072282 -33595723 + AluJo SINE Alu 1 312 0 326 325 145 9 chr20 33072817 33073075 -33594930 - L2 LINE L2 -213 3059 2777 461 241 198 12 chr20 33073335 33073497 -33594508 - MIR SINE MIR -21 241 50 859 269 33 25 chr20 33073695 33073940 -33594065 + MIR SINE MIR 6 252 -10 254 284 23 0 chr20 33073961 33074049 -33593956 - MLT1J LTR MaLR 0 511 422 2094 112 0 53 chr20 33074245 33074568 -33593437 + AluSx SINE Alu 1 306 -6 321 280 120 51 chr20 33074579 33074754 -33593251 - L1ME4a LINE L1 0 6121 5935 398 233 103 69 chr20 33074873 33074932 -33593073 - L1MC4a LINE L1 -202 5919 5863 1817 148 72 0 chr20 33074932 33075209 -33592796 + AluJb SINE Alu 1 297 -15 398 233 103 69 chr20 33075209 33075445 -33592560 - L1MC4a LINE L1 -258 5863 5613 2334 93 0 3 chr20 33075454 33075756 -33592249 - AluY SINE Alu -10 301 1 2381 93 0 6 chr20 33075763 33076074 -33591931 - AluSc SINE Alu 0 309 1 1313 244 90 18 chr20 33076079 33076579 -33591426 - L2 LINE L2 -537 2777 2242 1949 109 69 0 chr20 33076935 33077209 -33590796 - AluSx SINE Alu -14 298 6 2445 78 0 0 chr20 33077297 33077590 -33590415 - AluSc SINE Alu -16 293 1 1113 120 6 13 chr20 33077730 33077888 -33590117 - AluJb SINE Alu -155 157 1 464 258 15 8 chr20 33077888 33078020 -33589985 - MIR SINE MIR -110 152 20 216 189 0 0 chr20 33078061 33078098 -33589907 + (CA)n Simple_repeat Simple_repeat 1 37 0 2141 125 0 14 chr20 33078521 33078817 -33589188 - AluSx SINE Alu -20 292 1 1053 71 0 57 chr20 33078819 33078960 -33589045 - AluSq/x SINE Alu -180 133 1 2297 111 10 0 chr20 33078964 33079270 -33588735 - AluSx SINE Alu -3 309 1 756 167 0 8 chr20 33079350 33079476 -33588529 - FLAM_C SINE Alu -17 126 2 1718 152 0 55 chr20 33079690 33079865 -33588140 - AluJo SINE Alu -19 293 141 2323 102 0 0 chr20 33079865 33080160 -33587845 - AluSq SINE Alu -18 295 1 1718 152 0 55 chr20 33080160 33080293 -33587712 - AluJo SINE Alu -171 141 2 442 312 21 11 chr20 33080298 33080487 -33587518 - L1ME LINE L1 -297 5824 5634 1280 226 61 109 chr20 33080501 33080779 -33587226 - MER68 LTR ERV1 -15 547 303 1762 142 28 14 chr20 33080779 33081088 -33586917 - AluJb SINE Alu 0 313 1 1280 226 61 109 chr20 33081088 33081330 -33586675 - MER68 LTR ERV1 -259 303 51 296 173 19 0 chr20 33081787 33081839 -33586166 - MER68 LTR ERV1 -507 55 3 2392 79 13 0 chr20 33081861 33082166 -33585839 - AluY SINE Alu -2 309 1 198 206 0 0 chr20 33082435 33082503 -33585502 + (CCA)n Simple_repeat Simple_repeat 2 69 0 276 311 117 0 chr20 33082708 33082811 -33585194 - L2 LINE L2 -24 3248 3134 1394 210 189 36 chr20 33083012 33083488 -33584517 - MLT1H LTR MaLR 0 549 1 978 27 0 9 chr20 33083859 33083971 -33584034 - AluY SINE Alu -200 111 1 2137 72 69 4 chr20 33084795 33085071 -33582934 - AluY SINE Alu -17 294 1 395 344 92 13 chr20 33085374 33085601 -33582404 - MIR SINE MIR 0 262 18 2557 48 0 3 chr20 33085917 33086210 -33581795 + AluY SINE Alu 2 293 -18 2175 118 7 0 chr20 33086423 33086720 -33581285 + AluJb SINE Alu 1 299 -13 181 286 89 0 chr20 33086755 33086811 -33581194 - L2 LINE L2 -197 3075 3015 270 176 0 0 chr20 33087037 33087088 -33580917 + T-rich Low_complexity Low_complexity 1 51 0 2584 65 0 0 chr20 33087205 33087513 -33580492 + AluY SINE Alu 1 308 -3 2099 136 0 7 chr20 33087936 33088250 -33579755 + AluJb SINE Alu 1 312 0 277 293 75 28 chr20 33088620 33088726 -33579279 - MER5A DNA MER1_type -44 145 35 336 24 0 0 chr20 33088734 33088775 -33579230 + (TCTCCC)n Simple_repeat Simple_repeat 1 41 0 7403 62 11 16 chr20 33088775 33090346 -33577659 + SVA Other Other 57 1386 0 2155 107 4 0 chr20 33091145 33091448 -33576557 - AluSg SINE Alu 0 304 1 448 266 114 44 chr20 33091449 33091968 -33576037 - L1M4 LINE L1 -1275 4871 4317 2266 105 3 13 chr20 33092002 33092306 -33575699 - AluSx SINE Alu -11 301 1 5299 200 78 26 chr20 33092361 33092457 -33575548 + L1ME LINE L1 3851 3941 -2225 2214 121 0 13 chr20 33092457 33092763 -33575242 - AluSx SINE Alu -10 302 1 5299 200 78 26 chr20 33092763 33092865 -33575140 + L1ME LINE L1 3941 4036 -2130 861 142 0 8 chr20 33092865 33092999 -33575006 - FLAM_C SINE Alu 0 133 1 5299 200 78 26 chr20 33092999 33093460 -33574545 + L1ME LINE L1 4036 4472 -1694 2445 88 0 0 chr20 33093460 33093756 -33574249 + AluSc SINE Alu 1 296 -13 5299 200 78 26 chr20 33093756 33094702 -33573303 + L1ME LINE L1 4472 5531 -635 2017 217 42 13 chr20 33094702 33095154 -33572851 - LTR40c LTR ERVL 0 465 1 1292 210 89 11 chr20 33095156 33095437 -33572568 - HERVL40 LTR ERVL -2 5528 5226 2040 250 25 14 chr20 33095444 33095956 -33572049 - HERVL40 LTR ERVL -570 4960 4443 2495 82 0 0 chr20 33095956 33096259 -33571746 - AluY SINE Alu -8 303 1 577 93 98 0 chr20 33096260 33096419 -33571586 + L1MB7 LINE L1 5845 6181 -3 3003 241 77 33 chr20 33096421 33097249 -33570756 - HERVL40 LTR ERVL -1570 3960 3096 377 195 0 11 chr20 33097273 33097360 -33570645 + CT-rich Low_complexity Low_complexity 4 89 0 236 156 0 0 chr20 33097381 33097413 -33570592 + Tigger3(Golem) DNA MER2_type 33 64 -2965 1522 93 17 51 chr20 33097413 33097649 -33570356 + AluSg/x SINE Alu 80 307 -3 3273 120 40 24 chr20 33097650 33097972 -33570033 + Tigger3(Golem) DNA MER2_type 338 672 -2357 2336 99 0 0 chr20 33097972 33098274 -33569731 + AluSg SINE Alu 1 302 -8 3273 120 40 24 chr20 33098274 33098450 -33569555 + Tigger3(Golem) DNA MER2_type 672 844 -2185 794 203 25 6 chr20 33098450 33098629 -33569376 + FRAM SINE Alu 1 231 -242 1049 94 6 22 chr20 33098629 33098810 -33569195 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 794 203 25 6 chr20 33098810 33098920 -33569085 + FRAM SINE Alu 231 337 0 332 203 16 0 chr20 33098920 33098984 -33569021 + GA-rich Low_complexity Low_complexity 5 69 0 1033 122 52 103 chr20 33098984 33099066 -33568939 + Tigger3(Golem) DNA MER2_type 831 916 -2113 2381 86 0 17 chr20 33099066 33099368 -33568637 + AluSq SINE Alu 1 297 -16 759 152 8 8 chr20 33099378 33099503 -33568502 + FLAM_C SINE Alu 2 126 -7 1033 122 52 103 chr20 33099503 33099622 -33568383 + Tigger3(Golem) DNA MER2_type 925 1032 -1997 4563 185 80 40 chr20 33099625 33100736 -33567269 - L1 LINE L1 -1110 5036 3882 * 5060 129 32 36 chr20 33100721 33101688 -33566317 - L1M4c LINE L1 -4759 1625 663 989 167 42 0 chr20 33101688 33101856 -33566149 - L1M4c LINE L1 -6206 178 4 1883 78 62 0 chr20 33102044 33102287 -33565718 - AluSq SINE Alu -17 296 39 318 250 62 10 chr20 33102431 33102527 -33565478 - MIR SINE MIR -73 135 35 2136 156 46 85 chr20 33102746 33103226 -33564779 - MER65C LTR ERV1 0 461 1 305 24 24 0 chr20 33105001 33105043 -33562962 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 2203 114 7 0 chr20 33105052 33105341 -33562664 - AluSx SINE Alu -21 291 1 24 32 0 0 chr20 33106554 33106585 -33561420 + AT_rich Low_complexity Low_complexity 1 31 0 2525 35 0 3 chr20 33106592 33106898 -33561107 + AluY SINE Alu 2 306 0 537 281 72 53 chr20 33107311 33107631 -33560374 - L1ME4a LINE L1 -281 5840 5515 1228 114 0 0 chr20 33107862 33108028 -33559977 + AluSg SINE Alu 1 166 -144 2312 102 0 7 chr20 33108166 33108471 -33559534 + AluSx SINE Alu 1 303 -9 23 0 0 0 chr20 33108613 33108636 -33559369 + AT_rich Low_complexity Low_complexity 1 23 0 1755 134 47 0 chr20 33108646 33108921 -33559084 + AluSp SINE Alu 16 303 -10 1162 173 92 26 chr20 33108988 33109259 -33558746 + AluJo SINE Alu 14 302 -10 2259 121 0 0 chr20 33109290 33109588 -33558417 + AluSx SINE Alu 4 301 -11 806 118 9 0 chr20 33109592 33109702 -33558303 + AluSg SINE Alu 1 111 -199 254 143 0 0 chr20 33109702 33109737 -33558268 - Alu SINE Alu -273 35 1 1104 171 9 28 chr20 33110532 33110743 -33557262 - AluSg/x SINE Alu -1 311 105 1570 122 5 5 chr20 33110821 33111043 -33556962 - AluSg SINE Alu -88 222 1 2127 127 3 0 chr20 33111047 33111346 -33556659 - AluY SINE Alu -11 300 1 2093 110 7 36 chr20 33111580 33111888 -33556117 + AluSp SINE Alu 1 299 -14 1412 128 0 0 chr20 33111909 33112113 -33555892 - AluSg/x SINE Alu 0 312 109 492 184 0 0 chr20 33112200 33112276 -33555729 - MER2 DNA MER2_type -3 342 267 2034 152 0 0 chr20 33112287 33112583 -33555422 + AluSx SINE Alu 1 296 -16 678 231 8 0 chr20 33112592 33112726 -33555279 - MER2 DNA MER2_type -209 136 2 367 329 71 35 chr20 33112741 33112911 -33555094 - MER5A DNA MER1_type -13 176 1 2307 71 14 3 chr20 33112964 33113260 -33554745 + AluSp SINE Alu 1 299 -14 2083 141 3 0 chr20 33113588 33113887 -33554118 + AluSx SINE Alu 1 300 -12 320 165 19 19 chr20 33113997 33114100 -33553905 + (CA)n Simple_repeat Simple_repeat 2 104 0 222 37 0 0 chr20 33114920 33114947 -33553058 + (TG)n Simple_repeat Simple_repeat 2 28 0 1676 162 0 50 chr20 33115545 33115848 -33552157 + AluJo SINE Alu 1 288 -24 425 186 266 8 chr20 33116218 33116342 -33551663 + MER5A DNA MER1_type 27 182 -7 906 111 15 0 chr20 33116369 33116504 -33551501 - AluSg/x SINE Alu 0 312 176 203 281 112 0 chr20 33116634 33116723 -33551282 - L2 LINE L2 -101 3212 3114 2290 98 16 0 chr20 33116778 33117083 -33550922 - AluSp SINE Alu -3 310 1 26 0 0 0 chr20 33117231 33117257 -33550748 + AT_rich Low_complexity Low_complexity 1 26 0 2129 124 0 7 chr20 33117937 33118235 -33549770 - AluSx SINE Alu -16 296 1 949 209 8 56 chr20 33118238 33118287 -33549718 - L1MB8 LINE L1 0 6178 6128 2389 84 3 3 chr20 33118287 33118585 -33549420 - AluSp SINE Alu -15 298 1 949 209 8 56 chr20 33118585 33118752 -33549253 - L1MB8 LINE L1 -50 6128 5973 1719 203 0 7 chr20 33118752 33119053 -33548952 - AluJo SINE Alu -13 299 1 949 209 8 56 chr20 33119053 33119084 -33548921 - L1MB8 LINE L1 -205 5973 5942 534 187 154 8 chr20 33119084 33119207 -33548798 - MER82 DNA MER2_type -261 392 252 494 33 0 0 chr20 33119225 33119285 -33548720 - AluJ/FLAM SINE Alu -251 61 2 366 123 18 0 chr20 33119313 33119370 -33548635 + L1PB3 LINE L1 6090 6147 -7 669 212 20 20 chr20 33119384 33119535 -33548470 - MER82 DNA MER2_type -458 195 45 761 145 15 0 chr20 33119552 33119683 -33548322 - L1MB8 LINE L1 -399 5785 5653 1757 160 0 50 chr20 33120299 33120468 -33547537 - AluSx SINE Alu -10 302 126 2160 141 0 0 chr20 33120468 33120772 -33547233 - AluSx SINE Alu -8 304 1 1757 160 0 50 chr20 33120772 33120787 -33547218 - AluSx SINE Alu -186 126 112 195 42 0 0 chr20 33120787 33120811 -33547194 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1757 160 0 50 chr20 33120811 33120943 -33547062 - AluSx SINE Alu -200 112 1 924 219 0 48 chr20 33121039 33121249 -33546756 - AluJo SINE Alu -92 220 21 222 37 0 0 chr20 33121791 33121818 -33546187 + (TG)n Simple_repeat Simple_repeat 1 27 0 844 134 8 0 chr20 33121819 33121938 -33546067 - FLAM_C SINE Alu -23 120 1 2429 58 0 0 chr20 33122110 33122422 -33545583 - AluY SINE Alu 0 314 3 823 149 182 39 chr20 33122582 33122763 -33545242 + AluJo SINE Alu 1 207 -105 351 0 0 0 chr20 33122843 33122882 -33545123 + (TA)n Simple_repeat Simple_repeat 2 40 0 1990 135 0 13 chr20 33122882 33123186 -33544819 - AluSq SINE Alu -13 300 1 779 178 0 15 chr20 33123189 33123324 -33544681 - AluJo/FLAM SINE Alu -169 133 1 2023 123 18 0 chr20 33123523 33123807 -33544198 - AluSx SINE Alu -18 294 6 2041 113 3 11 chr20 33123899 33124209 -33543796 + AluSx SINE Alu 2 309 0 270 226 0 88 chr20 33125047 33125149 -33542856 - L1MC5 LINE L1 -30 7931 7839 1762 193 47 93 chr20 33126223 33126761 -33541244 - L1ME2 LINE L1 -6 6158 5649 1940 107 0 57 chr20 33126793 33127116 -33540889 + AluSx SINE Alu 3 308 0 661 140 61 44 chr20 33127117 33127231 -33540774 - AluJb SINE Alu -194 118 3 692 233 87 10 chr20 33127235 33127422 -33540583 - L1ME2 LINE L1 -510 5656 5485 2038 121 31 0 chr20 33127422 33127712 -33540293 - AluSx SINE Alu -13 299 1 692 233 87 10 chr20 33127712 33127822 -33540183 - L1ME2 LINE L1 -681 5485 5165 189 0 0 0 chr20 33127851 33127872 -33540133 + (T)n Simple_repeat Simple_repeat 1 21 0 2118 146 6 3 chr20 33127872 33128194 -33539811 - Tigger1 DNA MER2_type -2092 326 4 566 228 134 33 chr20 33128333 33128583 -33539422 + MER102a DNA MER1_type 29 319 -11 213 108 0 0 chr20 33128697 33128734 -33539271 + (T)n Simple_repeat Simple_repeat 1 37 0 26 0 0 0 chr20 33128738 33128764 -33539241 + AT_rich Low_complexity Low_complexity 1 26 0 8906 26 3 260 chr20 33128770 33130633 -33537372 - SVA Other Other -2 1384 1 2663 210 108 36 chr20 33130633 33131460 -33536545 - L1ME2 LINE L1 -1018 5128 4228 2071 134 20 0 chr20 33131460 33131765 -33536240 - AluSx SINE Alu -1 311 1 2663 210 108 36 chr20 33131765 33131822 -33536183 - L1ME2 LINE L1 -1918 4228 4177 357 319 64 13 chr20 33132184 33132415 -33535590 + MIR SINE MIR 10 252 -10 1349 164 97 53 chr20 33132771 33133070 -33534935 - AluJo SINE Alu 0 312 1 1234 136 179 8 chr20 33133348 33133599 -33534406 - MER7A DNA MER2_type -1 345 54 240 169 215 0 chr20 33133985 33134050 -33533955 - MER91C DNA MER1_type -26 114 36 1031 163 0 12 chr20 33134970 33135142 -33532863 - FRAM SINE Alu -6 170 1 484 299 64 6 chr20 33135146 33135303 -33532702 - MER5A DNA MER1_type -6 183 18 30 0 0 0 chr20 33135532 33135562 -33532443 + AT_rich Low_complexity Low_complexity 1 30 0 1449 194 26 4 chr20 33135792 33136065 -33531940 - AluJb SINE Alu -33 279 1 2172 111 7 0 chr20 33136110 33136408 -33531597 - AluSg SINE Alu -9 301 2 222 317 146 0 chr20 33136624 33136747 -33531258 - L2 LINE L2 -203 3069 2929 213 200 0 22 chr20 33136744 33136789 -33531216 - MIR SINE MIR -64 144 101 * 26 0 0 0 chr20 33136913 33136939 -33531066 + AT_rich Low_complexity Low_complexity 1 26 0 309 200 0 0 chr20 33136939 33136999 -33531006 - Alu SINE Alu 0 301 242 1330 243 72 45 chr20 33136999 33137418 -33530587 + L2 LINE L2 2512 2941 -373 480 210 35 125 chr20 33137525 33137637 -33530368 + L2 LINE L2 3132 3220 -93 2272 108 3 0 chr20 33137637 33137944 -33530061 - AluSg SINE Alu -2 308 1 480 210 35 125 chr20 33137944 33138031 -33529974 + L2 LINE L2 3220 3313 0 783 32 0 0 chr20 33138031 33138125 -33529880 + (AATAG)n Simple_repeat Simple_repeat 3 96 0 210 234 21 43 chr20 33138126 33138173 -33529832 - L2 LINE L2 -80 3192 3147 1669 122 41 24 chr20 33138541 33138835 -33529170 - AluSq SINE Alu -2 311 13 1265 133 5 182 chr20 33139526 33139894 -33528111 - AluJb SINE Alu -9 303 1 2234 117 3 0 chr20 33140019 33140319 -33527686 + AluSx SINE Alu 2 302 -10 718 178 75 34 chr20 33140364 33140510 -33527495 + FRAM SINE Alu 20 171 -5 1563 147 94 8 chr20 33140521 33140787 -33527218 + AluJo SINE Alu 1 289 -23 387 0 0 0 chr20 33140787 33140830 -33527175 + (TG)n Simple_repeat Simple_repeat 2 44 0 706 143 45 45 chr20 33141042 33141175 -33526830 - FLAM_C SINE Alu 0 133 1 2298 100 10 0 chr20 33141334 33141643 -33526362 - AluSx SINE Alu 0 312 1 1307 178 50 60 chr20 33141777 33142058 -33525947 + AluJo SINE Alu 1 278 -34 360 64 0 0 chr20 33142058 33142105 -33525900 + (TCCA)n Simple_repeat Simple_repeat 2 48 0 241 339 9 17 chr20 33142304 33142419 -33525586 + L1M4b LINE L1 11 124 -6735 * 1883 161 119 22 chr20 33142401 33142853 -33525152 + L1MB8 LINE L1 5682 6177 -1 180 0 0 0 chr20 33142961 33142981 -33525024 + (T)n Simple_repeat Simple_repeat 1 20 0 252 0 0 0 chr20 33143708 33143736 -33524269 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 1959 113 3 7 chr20 33143739 33144022 -33523983 - AluSx SINE Alu -30 282 1 2442 90 3 0 chr20 33144305 33144615 -33523390 - AluSp SINE Alu -2 311 1 1989 126 0 4 chr20 33144654 33144931 -33523074 - AluSx SINE Alu -36 276 1 186 300 0 33 chr20 33145434 33145494 -33522511 - MIR3 SINE MIR -22 186 129 379 280 136 74 chr20 33145833 33146251 -33521754 + L2 LINE L2 2816 3259 -54 2080 120 0 23 chr20 33146332 33146631 -33521374 - AluSx SINE Alu -20 292 1 748 199 51 26 chr20 33146640 33146796 -33521209 - MER58A DNA MER1_type -16 208 49 26 0 0 0 chr20 33146992 33147018 -33520987 + AT_rich Low_complexity Low_complexity 1 26 0 2095 117 20 0 chr20 33147348 33147648 -33520357 - AluSx SINE Alu -6 306 1 273 119 0 0 chr20 33147650 33147692 -33520313 + (TTTTC)n Simple_repeat Simple_repeat 2 43 0 544 96 0 0 chr20 33147695 33147778 -33520227 - AluSp/q SINE Alu -2 311 229 310 136 9 0 chr20 33147778 33147837 -33520168 - Alu SINE Alu -255 45 2 1109 176 137 31 chr20 33148043 33148369 -33519636 - MER93b LTR ERV1 0 403 14 2130 198 85 170 chr20 33148604 33148954 -33519051 - L1MC4 LINE L1 -89 7953 7575 1629 213 0 3 chr20 33148954 33149259 -33518746 - AluJb SINE Alu -1 311 8 2130 198 85 170 chr20 33149259 33149695 -33518310 - L1MC4 LINE L1 -467 7575 7104 766 215 0 15 chr20 33149695 33149830 -33518175 - AluJo SINE Alu -175 137 5 2130 198 85 170 chr20 33149830 33150104 -33517901 - L1MC4 LINE L1 -938 7104 6789 2433 88 0 0 chr20 33150104 33150412 -33517593 - AluSg SINE Alu -2 308 1 2130 198 85 170 chr20 33150412 33150579 -33517426 - L1MC4 LINE L1 -1253 6789 6609 1890 155 3 3 chr20 33150616 33150906 -33517099 - AluJo SINE Alu -22 290 1 2109 123 23 3 chr20 33150922 33151224 -33516781 - AluSg SINE Alu 0 310 3 1836 159 7 3 chr20 33151236 33151532 -33516473 - AluSx SINE Alu -15 297 1 1118 199 107 100 chr20 33151538 33151936 -33516069 - L1MC5 LINE L1 -447 7514 7109 571 223 25 0 chr20 33151936 33152057 -33515948 - L1PA16 LINE L1 -7 6159 6036 1118 199 107 100 chr20 33152057 33152257 -33515748 - L1MC5 LINE L1 -852 7109 6912 2063 141 13 0 chr20 33152268 33152573 -33515432 - AluSx SINE Alu -3 309 1 1996 125 0 4 chr20 33152585 33152885 -33515120 - AluSc SINE Alu 0 299 1 769 216 61 86 chr20 33152885 33153130 -33514875 - L1MC5 LINE L1 -1040 6921 6683 822 232 58 11 chr20 33153153 33153397 -33514608 - MLT1F LTR MaLR -50 517 175 263 283 136 54 chr20 33153439 33153623 -33514382 + MIR SINE MIR 45 243 -19 2370 100 0 0 chr20 33153966 33154275 -33513730 - AluSc SINE Alu 0 309 1 674 175 0 0 chr20 33154275 33154378 -33513627 - FLAM_C SINE Alu -5 138 36 647 175 0 0 chr20 33154377 33154474 -33513531 - AluJ/FLAM SINE Alu -215 97 1 * 601 177 40 24 chr20 33154494 33154618 -33513387 - L1MD2 LINE L1 -13 6346 6221 215 228 0 29 chr20 33155423 33155485 -33512520 + GA-rich Low_complexity Low_complexity 1 60 0 800 160 8 17 chr20 33156488 33156607 -33511398 - FLAM_C SINE Alu -15 118 1 2229 89 23 0 chr20 33157351 33157654 -33510351 - AluSg SINE Alu 0 310 1 1636 198 0 10 chr20 33157665 33157973 -33510032 - AluJb SINE Alu -1 311 7 2342 67 0 0 chr20 33158012 33158318 -33509687 - AluY SINE Alu 0 306 1 252 242 13 134 chr20 33159137 33159294 -33508711 - MIR3 SINE MIR -17 191 54 2242 112 0 3 chr20 33159422 33159718 -33508287 + AluSx SINE Alu 1 295 -17 230 241 89 0 chr20 33159746 33159825 -33508180 - L2 LINE L2 -197 3075 2990 1872 101 110 44 chr20 33160496 33160677 -33507328 + MER44D DNA MER2_type 1 169 -2322 2440 78 0 10 chr20 33160677 33160983 -33507022 - AluSq SINE Alu -10 303 1 1872 101 110 44 chr20 33160983 33161119 -33506886 + MER44D DNA MER2_type 169 609 0 356 184 72 43 chr20 33161181 33161281 -33506724 + MIR SINE MIR 63 171 -37 27 0 0 0 chr20 33162834 33162861 -33505144 + AT_rich Low_complexity Low_complexity 1 27 0 533 235 0 0 chr20 33163012 33163110 -33504895 + FLAM_A SINE Alu 1 98 -44 1992 110 7 10 chr20 33163110 33163402 -33504603 + AluSx SINE Alu 13 303 -9 268 244 133 44 chr20 33164816 33164951 -33503054 - L1MEc LINE L1 -4682 1714 1568 1783 119 0 15 chr20 33164976 33165245 -33502760 - AluSx SINE Alu 0 312 48 677 240 76 33 chr20 33165267 33165542 -33502463 + L1MC4 LINE L1 7720 8006 -36 818 326 116 23 chr20 33165625 33166147 -33501858 - L2 LINE L2 -266 3047 2467 595 225 57 105 chr20 33166180 33166514 -33501491 - L2 LINE L2 0 3313 2996 2313 120 0 0 chr20 33166571 33166879 -33501126 - AluSg SINE Alu -2 308 1 1568 176 3 31 chr20 33166894 33167183 -33500822 - AluJb SINE Alu -26 286 6 2362 80 10 0 chr20 33167443 33167744 -33500261 + AluSp SINE Alu 1 304 -9 2459 61 0 32 chr20 33168873 33169186 -33498819 - AluY SINE Alu -8 303 1 241 274 44 22 chr20 33170825 33170920 -33497085 + MIR SINE MIR 63 163 -45 21 0 0 0 chr20 33172128 33172149 -33495856 + AT_rich Low_complexity Low_complexity 1 21 0 335 113 0 16 chr20 33172210 33172272 -33495733 - Alu SINE Alu 0 302 242 228 237 0 0 chr20 33172263 33172301 -33495704 - AluJ/monomer SINE Alu -263 38 1 * 823 153 0 67 chr20 33172316 33172466 -33495539 - FLAM_C SINE Alu -2 141 2 831 248 93 22 chr20 33172466 33172788 -33495217 - L1M4 LINE L1 -945 5201 4857 2257 97 3 10 chr20 33172917 33173216 -33494789 - AluSp SINE Alu -16 297 1 311 372 0 0 chr20 33173450 33173544 -33494461 - L2 LINE L2 -33 3239 3146 1530 198 3 11 chr20 33173669 33173952 -33494053 + AluJb SINE Alu 1 281 -31 26 0 0 0 chr20 33173952 33173978 -33494027 + AT_rich Low_complexity Low_complexity 1 26 0 222 91 0 0 chr20 33174096 33174129 -33493876 + (TCCCC)n Simple_repeat Simple_repeat 1 33 0 2027 146 17 0 chr20 33174155 33174456 -33493549 - AluSg SINE Alu -4 306 1 231 61 0 0 chr20 33174580 33174613 -33493392 + (TG)n Simple_repeat Simple_repeat 2 34 0 242 362 69 9 chr20 33175190 33175306 -33492699 + L2 LINE L2 3146 3268 -4 2241 87 18 0 chr20 33175310 33175596 -33492409 + AluSq SINE Alu 1 291 -22 883 124 0 0 chr20 33175638 33175759 -33492246 + AluSq/x SINE Alu 1 121 -191 2157 124 7 0 chr20 33175760 33176058 -33491947 + AluSx SINE Alu 2 301 -11 31 26 0 0 chr20 33176626 33176664 -33491341 + AT_rich Low_complexity Low_complexity 1 38 0 1950 135 7 3 chr20 33177010 33177347 -33490658 - AluSq SINE Alu 0 338 1 2254 74 40 14 chr20 33177359 33177656 -33490349 - AluY SINE Alu -6 305 1 239 288 0 0 chr20 33178680 33178739 -33489266 - L1ME LINE L1 -462 5659 5601 1642 110 163 4 chr20 33179269 33179533 -33488472 - AluSg1 SINE Alu -3 306 1 251 254 67 75 chr20 33179619 33179753 -33488252 + L3 LINE CR1 1436 1568 -9 1681 173 0 7 chr20 33180025 33180341 -33487664 - AluJb SINE Alu 0 316 3 297 68 0 0 chr20 33180342 33180386 -33487619 + (TTTTG)n Simple_repeat Simple_repeat 1 44 0 2110 93 0 4 chr20 33180386 33180665 -33487340 - AluSc SINE Alu -31 278 1 1115 83 0 0 chr20 33180665 33180798 -33487207 - AluSc SINE Alu -176 133 1 507 247 24 16 chr20 33181161 33181320 -33486685 - L1MA10 LINE L1 0 6334 6150 259 225 22 11 chr20 33181459 33181548 -33486457 + (TA)n Simple_repeat Simple_repeat 2 91 0 2096 134 16 0 chr20 33181764 33182070 -33485935 + AluSx SINE Alu 1 311 -1 583 141 131 91 chr20 33182858 33183057 -33484948 - Charlie5 DNA MER1_type 0 2624 2418 1451 167 68 44 chr20 33183070 33183364 -33484641 + AluJb SINE Alu 1 301 -11 2177 108 0 14 chr20 33183992 33184289 -33483716 + AluSq SINE Alu 1 293 -20 1741 158 55 0 chr20 33184301 33184593 -33483412 + AluSx SINE Alu 1 308 -4 2145 120 0 0 chr20 33185180 33185471 -33482534 + AluSq SINE Alu 1 291 -22 232 171 24 0 chr20 33185474 33185556 -33482449 + (TA)n Simple_repeat Simple_repeat 1 84 0 651 202 54 23 chr20 33185678 33185807 -33482198 + FLAM_A SINE Alu 1 133 0 2090 129 7 3 chr20 33186148 33186450 -33481555 + AluSx SINE Alu 1 303 -9 812 179 115 111 chr20 33186470 33186491 -33481514 - Charlie1b DNA MER1_type -2508 253 234 2169 116 10 0 chr20 33186491 33186792 -33481213 - AluSx SINE Alu -8 304 1 812 179 115 111 chr20 33186792 33187022 -33480983 - Charlie1b DNA MER1_type -2527 234 1 675 293 98 11 chr20 33187025 33187312 -33480693 - L2 LINE L2 -499 2815 2504 2260 103 0 3 chr20 33187317 33187619 -33480386 - AluSc SINE Alu -8 301 1 227 254 0 34 chr20 33187683 33187742 -33480263 + MIR SINE MIR 33 89 -119 2220 97 0 3 chr20 33188319 33188609 -33479396 - AluSc SINE Alu -20 289 1 1695 167 43 10 chr20 33188639 33188939 -33479066 - AluSx SINE Alu -2 310 1 272 252 87 68 chr20 33188989 33189092 -33478913 - MIR SINE MIR -117 145 41 722 288 173 37 chr20 33189608 33190018 -33477987 + L2 LINE L2 2007 2472 -842 1625 170 26 26 chr20 33190019 33190331 -33477674 - AluJo SINE Alu 0 312 1 21 0 0 0 chr20 33190348 33190369 -33477636 + AT_rich Low_complexity Low_complexity 1 21 0 1681 136 33 15 chr20 33190514 33190787 -33477218 + MER1B DNA MER1_type 1 278 -61 726 208 64 69 chr20 33190790 33190935 -33477070 - AluJo SINE Alu -59 253 108 9229 54 8 2 chr20 33190935 33191999 -33476006 - MER11C LTR ERVK 0 1071 1 726 208 64 69 chr20 33191999 33192026 -33475979 - AluJo SINE Alu -204 108 82 485 260 81 16 chr20 33192049 33192078 -33475927 + MER58A DNA MER1_type 1 27 -314 2042 125 7 3 chr20 33192078 33192374 -33475631 + AluSx SINE Alu 1 297 -15 485 260 81 16 chr20 33192374 33192467 -33475538 + MER58A DNA MER1_type 27 131 -93 271 189 75 0 chr20 33192468 33192521 -33475484 + MER58A DNA MER1_type 168 224 0 2165 105 0 30 chr20 33192688 33192993 -33475012 - AluSx SINE Alu -16 296 1 2197 112 23 0 chr20 33193282 33193587 -33474418 - AluSq SINE Alu -1 312 1 292 314 0 0 chr20 33193972 33194074 -33473931 + L1ME LINE L1 5723 5824 -297 300 214 0 0 chr20 33194169 33194225 -33473780 - MLT1G LTR MaLR -6 584 529 363 174 27 48 chr20 33194250 33194357 -33473648 - AluS SINE Alu -237 63 1 2216 116 0 0 chr20 33194363 33194664 -33473341 - AluSx SINE Alu -11 301 1 1511 166 30 50 chr20 33194909 33195210 -33472795 - AluJo SINE Alu -17 295 1 543 202 0 0 chr20 33195657 33195746 -33472259 - Tigger7 DNA MER2_type 0 2587 2499 2787 147 118 10 chr20 33195770 33196260 -33471745 - Tigger7 DNA MER2_type -1944 543 1 246 246 16 0 chr20 33196565 33196626 -33471379 + (CATATA)n Simple_repeat Simple_repeat 2 63 0 248 273 117 18 chr20 33197244 33197355 -33470650 - MIR SINE MIR -105 103 31 336 331 67 13 chr20 33197365 33197588 -33470417 - MIR3 SINE MIR -14 248 8 2320 99 7 0 chr20 33198925 33199218 -33468787 - AluSx SINE Alu -17 295 1 1660 219 20 82 chr20 33199462 33199951 -33468054 - MLT1C LTR MaLR -4 463 5 964 242 73 51 chr20 33200562 33200588 -33467417 + L1M4 LINE L1 5341 5365 -809 1662 175 63 45 chr20 33200588 33200970 -33467035 - MLT1B LTR MaLR 0 390 2 964 242 73 51 chr20 33200970 33201293 -33466712 + L1M4 LINE L1 5365 5698 -476 2210 112 0 3 chr20 33202318 33202612 -33465393 + AluSx SINE Alu 1 293 -19 200 356 77 19 chr20 33202699 33202803 -33465202 - L2 LINE L2 -218 3054 2945 1705 138 6 83 chr20 33203101 33203427 -33464578 + AluJb SINE Alu 2 302 -10 1440 220 17 0 chr20 33204607 33204898 -33463107 - AluJo SINE Alu 0 312 17 369 296 0 11 chr20 33205498 33205586 -33462419 + Charlie1 DNA MER1_type 3 89 -2672 * 546 165 157 124 chr20 33205583 33205850 -33462155 + Charlie1 DNA MER1_type 2410 2685 -76 1305 176 97 29 chr20 33205912 33206191 -33461814 + AluJo SINE Alu 1 298 -14 372 229 107 15 chr20 33206259 33206390 -33461615 - L1ME3A LINE L1 -306 5864 5722 1347 267 69 24 chr20 33206396 33206815 -33461190 - MER68 LTR ERV1 -7 555 118 707 51 0 4 chr20 33207052 33207230 -33460775 + AluY SINE Alu 51 297 -14 510 143 41 10 chr20 33207325 33207423 -33460582 - L1MB3 LINE L1 0 6183 6083 2496 149 31 2 chr20 33207517 33207934 -33460071 - L1MB3 LINE L1 -30 6153 5725 664 133 0 10 chr20 33207976 33208074 -33459931 - MER68 LTR ERV1 -465 97 1 764 164 0 9 chr20 33208160 33208276 -33459729 + FLAM_A SINE Alu 11 125 -17 697 199 41 95 chr20 33208638 33208745 -33459260 + L1MDa LINE L1 21 111 -6429 349 176 222 65 chr20 33208745 33208853 -33459152 + FLAM_A SINE Alu 2 126 -7 697 199 41 95 chr20 33208853 33208966 -33459039 + L1MDa LINE L1 111 229 -6311 914 174 7 0 chr20 33209027 33209171 -33458834 + FRAM SINE Alu 1 142 -34 512 0 32 0 chr20 33209171 33209234 -33458771 + (TAGA)n Simple_repeat Simple_repeat 1 65 0 228 167 0 0 chr20 33209254 33209302 -33458703 + (TA)n Simple_repeat Simple_repeat 2 49 0 561 199 152 18 chr20 33209302 33209473 -33458532 + L1MDa LINE L1 2085 2278 -4262 301 175 48 16 chr20 33209470 33209533 -33458472 + L1MD2 LINE L1 6069 6133 -226 * 270 184 161 58 chr20 33209535 33209580 -33458425 + L1MD3 LINE L1 7829 7868 -127 1738 158 0 0 chr20 33209580 33209840 -33458165 + AluSx SINE Alu 37 296 -16 270 184 161 58 chr20 33209840 33209881 -33458124 + L1MD3 LINE L1 7868 7924 -71 1218 174 39 53 chr20 33210065 33210346 -33457659 + AluJo SINE Alu 19 295 -17 288 0 0 0 chr20 33211741 33211773 -33456232 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 1292 169 3 113 chr20 33212192 33212550 -33455455 + AluSx SINE Alu 1 312 0 1618 146 45 32 chr20 33213325 33213633 -33454372 + AluSx SINE Alu 1 312 0 1922 135 43 0 chr20 33213657 33213938 -33454067 + AluSx SINE Alu 1 293 -19 1122 215 63 36 chr20 33213971 33214273 -33453732 - L1MC4 LINE L1 -249 7793 7484 556 149 91 84 chr20 33214281 33214387 -33453618 + MER58 DNA MER1_type 2238 2347 -73 2140 99 6 29 chr20 33214387 33214699 -33453306 - AluSg SINE Alu -4 306 2 556 149 91 84 chr20 33214699 33214746 -33453259 + MER58 DNA MER1_type 2347 2392 -28 1687 161 39 7 chr20 33216503 33216659 -33451346 - AluJb SINE Alu -23 289 119 369 0 0 0 chr20 33216659 33216700 -33451305 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1687 161 39 7 chr20 33216700 33216823 -33451182 - AluJb SINE Alu -193 119 1 224 286 119 24 chr20 33216858 33216942 -33451063 + MER5B DNA MER1_type 54 145 -33 288 111 0 0 chr20 33217054 33217099 -33450906 + (A)n Simple_repeat Simple_repeat 1 45 0 195 42 0 0 chr20 33217336 33217360 -33450645 + (A)n Simple_repeat Simple_repeat 1 24 0 251 263 0 18 chr20 33217762 33217819 -33450186 + L2 LINE L2 3208 3263 -9 1497 179 57 4 chr20 33218317 33218596 -33449409 + AluJb SINE Alu 1 294 -18 656 197 143 0 chr20 33218605 33218752 -33449253 + L1MC4 LINE L1 7874 8041 -1 1310 168 104 46 chr20 33218765 33218920 -33449085 + AluJb SINE Alu 1 146 -156 2365 97 0 0 chr20 33218920 33219230 -33448775 + AluY SINE Alu 1 310 -1 1310 168 104 46 chr20 33219230 33219354 -33448651 + AluJb SINE Alu 146 296 -6 372 270 0 43 chr20 33219396 33219511 -33448494 + MIR3 SINE MIR 15 124 -84 362 313 227 0 chr20 33219931 33220107 -33447898 - MIR SINE MIR -6 256 41 2066 112 4 0 chr20 33220215 33220493 -33447512 + AluY SINE Alu 1 279 -32 627 198 54 0 chr20 33220624 33220735 -33447270 - FLAM_A SINE Alu -16 117 1 652 274 134 5 chr20 33220782 33221005 -33447000 - MER20B DNA MER1_type -235 548 297 366 299 51 19 chr20 33221025 33221182 -33446823 - L1ME LINE L1 -566 5600 5439 2069 138 0 3 chr20 33221577 33221868 -33446137 - AluSx SINE Alu -22 290 1 715 142 0 62 chr20 33222084 33222197 -33445808 + FLAM_A SINE Alu 1 106 -36 798 169 0 15 chr20 33223216 33223346 -33444659 - FLAM_C SINE Alu -14 129 2 2443 74 0 0 chr20 33224132 33224431 -33443574 + AluY SINE Alu 1 299 -12 459 254 23 15 chr20 33224754 33224884 -33443121 - MER94 DNA DNA -3 131 1 1888 127 25 7 chr20 33225130 33225443 -33442562 - AluSg SINE Alu 0 318 1 1812 116 84 4 chr20 33225571 33225846 -33442159 - AluSg SINE Alu -13 297 1 1914 135 36 0 chr20 33225877 33226158 -33441847 - AluSx SINE Alu -21 291 1 1769 161 3 3 chr20 33226188 33226504 -33441501 + AluSx SINE Alu 1 316 0 27 62 0 0 chr20 33226974 33227022 -33440983 + AT_rich Low_complexity Low_complexity 1 48 0 183 33 67 0 chr20 33227057 33227087 -33440918 + (TTTG)n Simple_repeat Simple_repeat 1 180 0 2106 125 0 0 chr20 33227087 33227366 -33440639 - AluSg SINE Alu -31 279 1 1847 159 7 0 chr20 33227497 33227799 -33440206 + AluJb SINE Alu 9 312 0 321 293 151 24 chr20 33227852 33228057 -33439948 + HAL1 LINE L1 748 978 -1529 528 299 88 10 chr20 33228063 33228257 -33439748 + HAL1 LINE L1 1177 1385 -1122 847 264 147 8 chr20 33228264 33228631 -33439374 + HAL1 LINE L1 1513 1930 -577 1343 183 13 59 chr20 33228685 33228991 -33439014 + AluJo SINE Alu 1 292 -20 1673 70 0 22 chr20 33229151 33229379 -33438626 + AluSg/x SINE Alu 81 303 -9 330 320 118 13 chr20 33229439 33229592 -33438413 - L1ME4a LINE L1 -27 6094 5926 359 330 132 22 chr20 33230468 33230695 -33437310 + L1MC/D LINE L1 5255 5506 -2302 2321 89 3 0 chr20 33230764 33231066 -33436939 - AluSp SINE Alu -10 303 1 2160 110 0 28 chr20 33231066 33231383 -33436622 - AluSx SINE Alu -4 308 1 271 311 50 78 chr20 33231441 33231660 -33436345 + MIR SINE MIR 15 227 -35 276 317 59 0 chr20 33232023 33232124 -33435881 + L2 LINE L2 2233 2339 -975 2435 73 0 0 chr20 33232392 33232694 -33435311 + AluY SINE Alu 1 302 -9 1663 163 7 29 chr20 33232699 33233006 -33434999 + AluJb SINE Alu 1 300 -12 293 283 239 14 chr20 33233941 33234079 -33433926 - MIR SINE MIR -1 261 93 1904 49 0 0 chr20 33234139 33234365 -33433640 - AluY SINE Alu -19 292 67 1685 140 4 4 chr20 33234711 33234961 -33433044 - AluSx SINE Alu -40 272 23 779 146 0 36 chr20 33235200 33235216 -33432789 - FLAM_C SINE Alu -169 133 118 432 0 0 0 chr20 33235216 33235264 -33432741 + (TG)n Simple_repeat Simple_repeat 1 48 0 779 146 0 36 chr20 33235264 33235384 -33432621 - FLAM_C SINE Alu -184 118 2 1597 171 23 29 chr20 33235419 33235728 -33432277 + AluJb SINE Alu 1 307 -5 300 290 32 0 chr20 33235910 33236003 -33432002 + MIR SINE MIR 3 98 -164 286 314 19 19 chr20 33236239 33236344 -33431661 + MIR3 SINE MIR 9 113 -95 1347 176 114 29 chr20 33236396 33236669 -33431336 + AluJo SINE Alu 4 299 -13 782 181 0 74 chr20 33236753 33236853 -33431152 + AluSx SINE Alu 20 126 -186 590 0 0 14 chr20 33236853 33236924 -33431081 + (TA)n Simple_repeat Simple_repeat 1 70 0 315 0 0 0 chr20 33236925 33236960 -33431045 + (TG)n Simple_repeat Simple_repeat 2 36 0 782 181 0 74 chr20 33236960 33237006 -33430999 + AluSx SINE Alu 125 157 -155 231 348 105 43 chr20 33237169 33237379 -33430626 - MIR SINE MIR -39 223 1 2240 107 13 0 chr20 33239091 33239399 -33428606 - AluSx SINE Alu 0 312 1 2126 119 0 22 chr20 33239673 33239992 -33428013 + AluSx SINE Alu 1 312 0 2120 118 3 3 chr20 33240370 33240683 -33427322 - AluSp SINE Alu 0 313 1 244 346 12 0 chr20 33240735 33240816 -33427189 + L3 LINE CR1 757 838 -739 368 270 0 0 chr20 33240816 33240916 -33427089 - L1MDb LINE L1 -5539 870 771 209 325 88 18 chr20 33242344 33242458 -33425547 + L3 LINE CR1 1453 1574 -3 1764 152 13 23 chr20 33243465 33243767 -33424238 - AluJb SINE Alu -13 299 1 543 328 133 30 chr20 33243852 33244249 -33423756 - L1ME4a LINE L1 -152 5969 5532 806 126 89 7 chr20 33245011 33245146 -33422859 + AluJo SINE Alu 1 146 -166 492 288 126 58 chr20 33245230 33245358 -33422647 + L1MEd LINE L1 675 793 -5326 2250 92 13 0 chr20 33245358 33245664 -33422341 + AluSg SINE Alu 1 310 0 492 288 126 58 chr20 33245664 33245844 -33422161 + L1MEd LINE L1 793 1004 -5115 2144 114 0 25 chr20 33245876 33246193 -33421812 + AluY SINE Alu 1 309 -2 447 276 55 28 chr20 33246926 33247071 -33420934 + MIR SINE MIR 81 229 -33 308 319 107 32 chr20 33247698 33247914 -33420091 - L2 LINE L2 -511 2803 2572 2005 127 10 10 chr20 33248493 33248800 -33419205 + AluSx SINE Alu 1 307 -5 503 81 122 14 chr20 33248935 33249009 -33418996 + AluJb SINE Alu 85 166 -146 * 703 115 0 0 chr20 33249008 33249104 -33418901 - AluSg/x SINE Alu -78 234 139 287 186 35 47 chr20 33250600 33250686 -33417319 - MIR SINE MIR -84 124 40 455 337 99 5 chr20 33251336 33251538 -33416467 - MIR SINE MIR -13 249 29 914 182 12 24 chr20 33252018 33252188 -33415817 - AluJb SINE Alu -8 304 137 192 77 0 0 chr20 33253922 33253948 -33414057 + (TTCA)n Simple_repeat Simple_repeat 4 29 0 300 344 57 0 chr20 33254170 33254292 -33413713 + MIR SINE MIR 117 245 -17 541 279 107 0 chr20 33254707 33254744 -33413261 - MIR SINE MIR -21 241 209 2031 147 0 0 chr20 33254744 33255050 -33412955 - AluSx SINE Alu -6 306 1 541 279 107 0 chr20 33255050 33255200 -33412805 - MIR SINE MIR -53 209 35 201 265 326 0 chr20 33255213 33255311 -33412694 - MIR SINE MIR -48 214 85 1378 171 28 35 chr20 33255767 33256053 -33411952 + AluJb SINE Alu 11 294 -18 2137 93 14 0 chr20 33258293 33258583 -33409422 + AluY SINE Alu 1 294 -17 242 320 87 10 chr20 33258794 33258897 -33409108 - MIR SINE MIR -92 170 60 2098 122 13 3 chr20 33258901 33259205 -33408800 + AluSx SINE Alu 2 308 -4 200 212 76 30 chr20 33261757 33261823 -33406182 + MIR SINE MIR 77 145 -117 401 231 104 113 chr20 33262168 33262389 -33405616 - MIR SINE MIR -16 246 28 322 289 237 6 chr20 33264307 33264480 -33403525 + L3 LINE CR1 1337 1549 -28 404 359 62 10 chr20 33265059 33265251 -33402754 + MIR SINE MIR 25 226 -36 195 353 229 0 chr20 33266564 33266686 -33401319 + MIR3 SINE MIR 33 182 -26 229 192 0 0 chr20 33267359 33267411 -33400594 + (CTGGGG)n Simple_repeat Simple_repeat 6 57 0 33 66 0 0 chr20 33267538 33267599 -33400406 + GC_rich Low_complexity Low_complexity 1 61 0 311 309 127 0 chr20 33267800 33267926 -33400079 + MIR SINE MIR 102 243 -19 351 302 218 8 chr20 33267994 33268369 -33399636 + L2 LINE L2 2637 3089 -183 216 0 0 0 chr20 33270475 33270499 -33397506 + (CAGCC)n Simple_repeat Simple_repeat 5 28 0 920 199 18 0 chr20 33270901 33271072 -33396933 - AluJo SINE Alu -19 293 120 398 210 68 25 chr20 33271096 33271240 -33396765 - MIR SINE MIR -63 145 8 198 323 16 63 chr20 33271503 33271630 -33396375 + MIR3 SINE MIR 39 159 -49 1513 158 62 15 chr20 33271771 33272043 -33395962 + AluJo SINE Alu 1 285 -27 563 254 5 74 chr20 33272195 33272362 -33395643 + L1ME3 LINE L1 5939 6089 -73 2091 131 0 0 chr20 33272362 33272660 -33395345 + AluSx SINE Alu 2 299 -13 563 254 5 74 chr20 33272660 33272709 -33395296 + L1ME3 LINE L1 6089 6140 -22 254 241 35 0 chr20 33272710 33272768 -33395237 + MIR SINE MIR 88 147 -115 932 210 136 29 chr20 33273724 33273996 -33394009 + MLT1F1 LTR MaLR 2 302 -265 417 180 79 0 chr20 33274052 33274141 -33393864 + MLT1F1 LTR MaLR 429 524 -43 1579 182 17 17 chr20 33274141 33274438 -33393567 - AluJo SINE Alu -15 297 1 298 273 236 6 chr20 33274527 33274692 -33393313 - MIR SINE MIR -50 212 10 202 275 138 0 chr20 33274724 33274804 -33393201 + L2 LINE L2 2311 2401 -913 188 300 171 0 chr20 33275255 33275325 -33392680 + L2 LINE L2 3186 3267 -5 198 325 65 0 chr20 33275492 33275569 -33392436 - MIR SINE MIR -171 91 10 2350 102 0 0 chr20 33276268 33276572 -33391433 + AluSx SINE Alu 1 304 -8 2001 154 3 0 chr20 33276590 33276901 -33391104 + AluSx SINE Alu 1 312 0 484 253 155 11 chr20 33277626 33277800 -33390205 + MIR SINE MIR 64 262 0 658 266 73 18 chr20 33278622 33278840 -33389165 + MIR SINE MIR 33 262 0 24 32 0 0 chr20 33279102 33279133 -33388872 + GC_rich Low_complexity Low_complexity 1 31 0 33 43 0 0 chr20 33279190 33279237 -33388768 + GC_rich Low_complexity Low_complexity 1 47 0 25 65 0 0 chr20 33279372 33279418 -33388587 + GC_rich Low_complexity Low_complexity 1 46 0 257 194 32 0 chr20 33279616 33279678 -33388327 + (CGGGG)n Simple_repeat Simple_repeat 4 67 0 215 241 28 32 chr20 33280152 33280267 -33387738 - L2 LINE L2 -2 3270 3116 1824 134 24 3 chr20 33280283 33280575 -33387430 + AluJb SINE Alu 3 300 -12 370 243 108 68 chr20 33280812 33280960 -33387045 + MER5A DNA MER1_type 5 158 -31 733 158 0 30 chr20 33281026 33281159 -33386846 - FLAM_A SINE Alu 0 133 5 305 277 123 23 chr20 33281437 33281567 -33386438 - MIR3 SINE MIR -9 199 57 306 192 0 0 chr20 33281794 33281846 -33386159 - L2 LINE L2 -6 3307 3256 240 244 161 4 chr20 33282272 33282421 -33385584 - MIR SINE MIR -37 225 53 617 190 107 0 chr20 33282768 33282889 -33385116 - L2 LINE L2 -1 3271 3138 261 328 142 22 chr20 33283269 33283403 -33384602 + MIR SINE MIR 2 151 -111 260 264 84 72 chr20 33283448 33283573 -33384432 + Charlie8 DNA MER1_type 1 123 -2294 2346 84 3 0 chr20 33283573 33283883 -33384122 - AluSp SINE Alu -2 311 1 2195 97 7 3 chr20 33283883 33284182 -33383823 - AluSx SINE Alu -12 300 1 260 264 84 72 chr20 33284182 33284222 -33383783 + Charlie8 DNA MER1_type 122 169 -2248 235 234 0 0 chr20 33284361 33284408 -33383597 + MIR SINE MIR 216 262 0 2196 119 0 0 chr20 33284488 33284799 -33383206 + AluSq SINE Alu 1 311 -2 2278 94 0 0 chr20 33284841 33285140 -33382865 + AluSx SINE Alu 1 299 -13 204 235 174 9 chr20 33285160 33285275 -33382730 + MIR3 SINE MIR 41 174 -34 390 183 183 48 chr20 33285526 33285652 -33382353 + MIR SINE MIR 119 261 -1 2302 91 0 3 chr20 33285728 33286035 -33381970 + AluSx SINE Alu 2 307 -5 1209 136 0 0 chr20 33286035 33286211 -33381794 + AluSg/x SINE Alu 132 307 -3 446 273 78 7 chr20 33286350 33286504 -33381501 + MER104 DNA Tc2 1 165 -15 676 327 101 7 chr20 33287211 33287974 -33380031 + L2 LINE L2 2459 3297 -16 2010 137 0 9 chr20 33288028 33288343 -33379662 + AluSx SINE Alu 1 312 0 2292 77 7 0 chr20 33288386 33288683 -33379322 - AluSp SINE Alu -14 299 1 1102 250 41 16 chr20 33288702 33288982 -33379023 + Charlie4a DNA MER1_type 1 291 -1670 2168 113 3 3 chr20 33288982 33289293 -33378712 - AluSx SINE Alu -1 311 1 1102 250 41 16 chr20 33289293 33289328 -33378677 + Charlie4a DNA MER1_type 291 324 -184 2207 99 3 0 chr20 33289328 33289631 -33378374 + AluSc SINE Alu 1 304 -5 28 29 0 0 chr20 33289923 33289958 -33378047 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chr20 33290134 33290156 -33377849 + AT_rich Low_complexity Low_complexity 1 22 0 2125 112 3 0 chr20 33290936 33291231 -33376774 - AluSx SINE Alu -16 296 1 1301 171 72 0 chr20 33291252 33291503 -33376502 - AluJb SINE Alu -32 280 12 6830 61 17 40 chr20 33291577 33293814 -33374191 + SVA Other Other 13 1383 -3 22 0 0 0 chr20 33293814 33293836 -33374169 + AT_rich Low_complexity Low_complexity 1 22 0 8921 65 5 137 chr20 33293837 33295434 -33372571 + SVA Other Other 1 1386 0 308 256 13 0 chr20 33295448 33295526 -33372479 + L1MC5 LINE L1 7812 7890 -71 27 0 0 0 chr20 33295526 33295553 -33372452 + AT_rich Low_complexity Low_complexity 1 27 0 2144 83 0 10 chr20 33295553 33295841 -33372164 + AluY SINE Alu 1 285 -26 228 35 0 0 chr20 33295851 33295880 -33372125 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 685 303 67 0 chr20 33296400 33296595 -33371410 - MIR SINE MIR -53 209 2 1366 229 158 37 chr20 33296621 33297058 -33370947 - LTR16C LTR ERVL -1 490 1 3685 118 25 6 chr20 33297108 33297624 -33370381 - MER1A DNA MER1_type 0 527 2 407 220 11 0 chr20 33297820 33297911 -33370094 + MER5A DNA MER1_type 18 109 -80 2143 114 20 0 chr20 33298090 33298389 -33369616 - AluSx SINE Alu -7 305 1 2354 78 0 13 chr20 33298419 33298727 -33369278 + AluY SINE Alu 1 304 -7 527 256 42 73 chr20 33298907 33299013 -33368992 + MIR SINE MIR 20 119 -143 2270 103 0 0 chr20 33299013 33299325 -33368680 - AluSx SINE Alu 0 312 1 527 256 42 73 chr20 33299325 33299409 -33368596 + MIR SINE MIR 119 204 -58 740 191 0 22 chr20 33299409 33299545 -33368460 + FLAM_C SINE Alu 1 133 0 462 246 120 0 chr20 33299645 33299787 -33368218 - MIR SINE MIR -103 159 1 962 188 211 4 chr20 33299808 33299999 -33368006 + MER33 DNA MER1_type 1 151 -2434 1653 133 72 4 chr20 33299999 33300277 -33367728 - AluJb SINE Alu -13 299 3 962 188 211 4 chr20 33300277 33300351 -33367654 + MER33 DNA MER1_type 151 321 -3 232 266 51 0 chr20 33300528 33300607 -33367398 - MIR SINE MIR -84 124 42 589 191 4 93 chr20 33301100 33301282 -33366723 - L1M4 LINE L1 -2827 3319 3163 1894 112 10 24 chr20 33301282 33301578 -33366427 - AluSx SINE Alu -12 300 9 589 191 4 93 chr20 33301578 33301641 -33366364 - L1M4 LINE L1 -2983 3163 3096 592 155 48 0 chr20 33301657 33301760 -33366245 - FLAM_C SINE Alu -23 120 13 1309 134 10 0 chr20 33301789 33301983 -33366022 - AluSg/x SINE Alu -11 299 104 26 30 0 0 chr20 33302009 33302042 -33365963 + AT_rich Low_complexity Low_complexity 1 33 0 1710 138 44 17 chr20 33302121 33302418 -33365587 + AluSx SINE Alu 2 306 -6 247 200 120 40 chr20 33302654 33302729 -33365276 - MIR SINE MIR -69 139 59 469 328 6 26 chr20 33302861 33303567 -33364438 + C-rich Low_complexity Low_complexity 1 691 0 637 288 173 11 chr20 33303988 33304259 -33363746 + L2 LINE L2 2994 3308 -5 228 314 25 42 chr20 33304274 33304392 -33363613 - L2 LINE L2 -39 3274 3159 457 219 149 0 chr20 33304686 33304800 -33363205 + FLAM_C SINE Alu 1 131 -2 1680 152 62 3 chr20 33304809 33305099 -33362906 + AluJo SINE Alu 1 307 -5 382 255 231 19 chr20 33305156 33305364 -33362641 - MER102b DNA MER1_type 0 341 90 1249 247 80 63 chr20 33305364 33305548 -33362457 + L2 LINE L2 2520 2699 -614 1929 118 16 30 chr20 33305548 33305718 -33362287 - AluSx SINE Alu -11 301 130 180 111 0 0 chr20 33305718 33305745 -33362260 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2121 88 0 11 chr20 33305745 33306028 -33361977 - AluSc SINE Alu -29 280 1 1929 118 16 30 chr20 33306028 33306161 -33361844 - AluSx SINE Alu -180 132 1 1249 247 80 63 chr20 33306161 33306770 -33361235 + L2 LINE L2 2699 3308 -5 1760 132 62 0 chr20 33307351 33307659 -33360346 + AluSx SINE Alu 1 312 0 365 290 26 0 chr20 33307950 33308063 -33359942 + MIR SINE MIR 30 147 -61 908 189 0 0 chr20 33308064 33308228 -33359777 - FRAM SINE Alu -12 164 1 1865 100 0 0 chr20 33308241 33308492 -33359513 - AluSx SINE Alu -13 299 49 2105 111 0 7 chr20 33308528 33308826 -33359179 - AluSx SINE Alu -16 296 1 593 302 77 70 chr20 33308865 33308937 -33359068 + L2 LINE L2 2590 2660 -612 2363 78 3 0 chr20 33308937 33309243 -33358762 - AluSp SINE Alu -6 307 1 593 302 77 70 chr20 33309243 33309834 -33358171 + L2 LINE L2 2660 3270 -2 368 271 138 44 chr20 33309969 33310025 -33357980 + L1ME4a LINE L1 5896 5945 -176 1876 129 0 11 chr20 33310025 33310305 -33357700 + AluSx SINE Alu 34 310 -2 368 271 138 44 chr20 33310305 33310451 -33357554 + L1ME4a LINE L1 5945 6117 -4 2702 7 0 0 chr20 33310458 33310758 -33357247 + AluYa5 SINE Alu 1 300 -11 301 263 13 0 chr20 33310949 33311025 -33356980 + MIR SINE MIR 64 140 -122 256 203 29 14 chr20 33311258 33311327 -33356678 + L1MC/D LINE L1 5680 5749 -2059 2466 64 0 3 chr20 33311328 33311640 -33356365 + AluY SINE Alu 1 311 0 407 333 24 12 chr20 33311737 33311902 -33356103 + MIR SINE MIR 10 176 -86 274 229 167 0 chr20 33311899 33311995 -33356010 - L2 LINE L2 0 3313 3202 * 2183 120 0 0 chr20 33311995 33312295 -33355710 - AluSx SINE Alu -12 300 1 531 231 184 0 chr20 33312295 33312442 -33355563 - MIR SINE MIR -44 218 45 248 255 157 29 chr20 33312470 33312572 -33355433 + L2 LINE L2 3188 3302 -11 181 162 54 0 chr20 33312539 33312576 -33355429 + MIR SINE MIR 223 261 -1 * 199 186 35 139 chr20 33312825 33312911 -33355094 - MIR3 SINE MIR -40 168 92 1958 78 22 11 chr20 33313832 33314102 -33353903 - AluSx SINE Alu -26 286 14 1143 278 71 27 chr20 33314123 33314450 -33353555 + L2 LINE L2 2770 3126 -187 2110 119 3 3 chr20 33314450 33314753 -33353252 - AluSg SINE Alu -7 303 1 1143 278 71 27 chr20 33314753 33314941 -33353064 + L2 LINE L2 3126 3304 -9 923 91 15 8 chr20 33315311 33315443 -33352562 + AluSq/x SINE Alu 1 133 -180 1625 126 49 4 chr20 33315488 33315751 -33352254 + AluJb SINE Alu 11 285 -27 1704 132 7 4 chr20 33315779 33316051 -33351954 + AluJb SINE Alu 1 273 -39 2499 53 0 0 chr20 33316056 33316357 -33351648 - AluY SINE Alu -10 301 1 2350 91 3 0 chr20 33316924 33317233 -33350772 + AluSx SINE Alu 1 310 -2 1149 124 0 0 chr20 33317234 33317403 -33350602 + AluSg/x SINE Alu 126 294 -16 1918 115 0 7 chr20 33317860 33318138 -33349867 - AluSx SINE Alu -1 311 36 1910 104 0 52 chr20 33318158 33318467 -33349538 - AluSg SINE Alu -17 293 1 1870 102 71 0 chr20 33318493 33318786 -33349219 - AluSx SINE Alu 0 312 1 589 122 56 28 chr20 33318787 33318894 -33349111 - MLT1B LTR MaLR -280 110 1 233 179 0 0 chr20 33319432 33319471 -33348534 - Alu SINE Alu -11 297 259 1489 140 4 4 chr20 33319523 33319759 -33348246 - AluSx SINE Alu -76 236 1 936 95 24 0 chr20 33319884 33320010 -33347995 + AluY SINE Alu 1 129 -182 703 252 161 24 chr20 33320073 33320414 -33347591 + L2 LINE L2 2925 3312 -1 1948 140 7 0 chr20 33320462 33320770 -33347235 + AluSx SINE Alu 1 310 -2 794 158 0 8 chr20 33321039 33321172 -33346833 - FLAM_C SINE Alu 0 133 2 1534 202 31 57 chr20 33321351 33321806 -33346199 - LTR47B LTR ERVL 0 443 1 498 186 0 0 chr20 33321894 33321980 -33346025 - AluJ/FLAM SINE Alu -226 86 1 2801 133 18 70 chr20 33322176 33322661 -33345344 + MER31A LTR ERV1 1 510 25 1550 177 9 38 chr20 33322661 33322978 -33345027 - AluJb SINE Alu -2 310 3 2206 84 3 40 chr20 33322986 33323308 -33344697 - AluSp SINE Alu -3 310 1 2801 133 18 70 chr20 33323308 33323325 -33344680 + MER31A LTR ERV1 469 485 0 1685 166 7 0 chr20 33323419 33323703 -33344302 - AluJo SINE Alu -25 287 2 2219 85 7 0 chr20 33323744 33324039 -33343966 - AluSg SINE Alu -13 297 1 224 308 13 39 chr20 33324081 33324159 -33343846 + L2 LINE L2 3196 3271 -1 1017 147 5 32 chr20 33324359 33324549 -33343456 + AluJo SINE Alu 7 191 -121 212 254 5 79 chr20 33325246 33325435 -33342570 + (CGGGG)n Simple_repeat Simple_repeat 2 176 0 2148 94 0 14 chr20 33326151 33326313 -33341692 - AluSx SINE Alu -17 295 137 2177 65 0 59 chr20 33326313 33326636 -33341369 - AluY SINE Alu -7 304 1 2148 94 0 14 chr20 33326636 33326770 -33341235 - AluSx SINE Alu -175 137 3 453 337 84 7 chr20 33327386 33327671 -33340334 - L2 LINE L2 -541 2773 2467 2050 128 0 3 chr20 33327808 33328105 -33339900 - AluSx SINE Alu -16 296 1 186 43 0 0 chr20 33328116 33328139 -33339866 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 2087 110 14 3 chr20 33328139 33328429 -33339576 - AluSx SINE Alu -19 293 1 1627 179 61 0 chr20 33328433 33328713 -33339292 - AluJo SINE Alu -11 301 5 2164 166 104 17 chr20 33328721 33329206 -33338799 - L1MD2 LINE L1 0 6359 5718 1564 103 0 0 chr20 33329358 33329581 -33338424 + LTR8A LTR ERV1 1 223 -504 1364 94 6 6 chr20 33329623 33329803 -33338202 - AluSg/x SINE Alu -46 266 87 1659 160 67 80 chr20 33330227 33330394 -33337611 - LTR8A LTR ERV1 0 727 559 2367 103 0 0 chr20 33330394 33330720 -33337285 - AluY SINE Alu 0 311 1 1659 160 67 80 chr20 33330720 33330953 -33337052 - LTR8A LTR ERV1 -168 559 332 2390 97 3 0 chr20 33330955 33331253 -33336752 + AluSp SINE Alu 1 299 -14 733 180 0 0 chr20 33331257 33331385 -33336620 + FLAM_C SINE Alu 2 129 -14 2259 106 9 0 chr20 33331387 33331726 -33336279 - LTR8A LTR ERV1 -385 342 1 2265 89 0 0 chr20 33332063 33332367 -33335638 - AluSg1 SINE Alu 0 304 1 1246 270 52 44 chr20 33332804 33332971 -33335034 - MLT1J LTR MaLR -2 509 345 2352 89 3 0 chr20 33332971 33333263 -33334742 - AluSq SINE Alu -20 293 1 1246 270 52 44 chr20 33333263 33333598 -33334407 - MLT1J LTR MaLR -166 345 3 1603 178 10 40 chr20 33333603 33333907 -33334098 - AluJb SINE Alu -17 295 1 2302 116 3 3 chr20 33334493 33334804 -33333201 - AluSx SINE Alu -1 311 1 492 283 35 0 chr20 33334900 33335045 -33332960 + MIR SINE MIR 35 184 -78 400 261 158 30 chr20 33335076 33335279 -33332726 - MLT1J LTR MaLR -50 461 233 2395 77 3 3 chr20 33335294 33335594 -33332411 - AluSg SINE Alu -10 300 1 228 143 0 0 chr20 33335595 33335630 -33332375 - Alu SINE Alu -182 120 86 1013 200 4 65 chr20 33335630 33335860 -33332145 - AluJo SINE Alu -92 220 5 385 284 80 34 chr20 33335864 33336040 -33331965 - MLT1J LTR MaLR -286 225 42 443 143 8 151 chr20 33336044 33336131 -33331874 + FAM SINE Alu 74 172 -149 2384 90 0 3 chr20 33336131 33336432 -33331573 - AluSq SINE Alu -13 300 1 2305 101 7 13 chr20 33336435 33336741 -33331264 - AluSx SINE Alu -7 305 2 443 143 8 151 chr20 33336741 33336775 -33331230 + FAM SINE Alu 174 181 -4 423 328 80 38 chr20 33336909 33337104 -33330901 - L2 LINE L2 -1 3271 3061 2326 107 0 3 chr20 33337104 33337412 -33330593 + AluSq SINE Alu 6 312 -1 423 328 80 38 chr20 33337412 33337478 -33330527 - L2 LINE L2 -211 3061 2999 2402 94 0 0 chr20 33337692 33337991 -33330014 - AluSx SINE Alu -13 299 1 585 200 9 0 chr20 33338409 33338519 -33329486 - L2 LINE L2 0 3313 3203 24 0 0 0 chr20 33338720 33338744 -33329261 + AT_rich Low_complexity Low_complexity 1 24 0 1747 250 90 21 chr20 33338807 33339029 -33328976 - L2 LINE L2 -297 3016 2811 2633 43 3 0 chr20 33339029 33339328 -33328677 - AluY SINE Alu -11 300 1 2341 96 0 7 chr20 33339328 33339631 -33328374 - AluSc SINE Alu -8 301 1 1747 250 90 21 chr20 33339631 33340136 -33327869 - L2 LINE L2 -501 2812 2242 2934 7 0 0 chr20 33340433 33340742 -33327263 + AluYa5 SINE Alu 1 309 -2 1984 109 69 0 chr20 33340813 33341088 -33326917 - AluSx SINE Alu -13 299 6 2475 78 0 0 chr20 33341176 33341469 -33326536 - AluSc SINE Alu -16 293 1 1123 120 6 13 chr20 33341609 33341767 -33326238 - AluJb SINE Alu -155 157 1 475 265 15 8 chr20 33341767 33341899 -33326106 - MIR SINE MIR -110 152 20 216 189 0 0 chr20 33341940 33341977 -33326028 + (CA)n Simple_repeat Simple_repeat 1 37 0 2170 125 0 14 chr20 33342400 33342696 -33325309 - AluSx SINE Alu -20 292 1 1087 70 0 56 chr20 33342696 33342839 -33325166 - AluSq/x SINE Alu -178 135 1 2337 111 10 0 chr20 33342843 33343149 -33324856 - AluSx SINE Alu -3 309 1 699 177 0 8 chr20 33343231 33343355 -33324650 - FLAM_C SINE Alu -19 124 2 1781 152 0 55 chr20 33343569 33343744 -33324261 - AluJo SINE Alu -19 293 141 2376 98 0 0 chr20 33343744 33344040 -33323965 - AluSq SINE Alu -17 296 1 1781 152 0 55 chr20 33344040 33344173 -33323832 - AluJo SINE Alu -171 141 2 444 312 21 11 chr20 33344178 33344367 -33323638 - L1ME LINE L1 -297 5824 5634 1254 228 61 109 chr20 33344381 33344659 -33323346 - MER68 LTR ERV1 -15 547 303 1783 145 28 14 chr20 33344659 33344968 -33323037 - AluJb SINE Alu 0 313 1 1254 228 61 109 chr20 33344968 33345210 -33322795 - MER68 LTR ERV1 -259 303 51 280 173 19 0 chr20 33345668 33345720 -33322285 - MER68 LTR ERV1 -507 55 3 2408 82 13 0 chr20 33345742 33346047 -33321958 - AluY SINE Alu -2 309 1 198 206 0 0 chr20 33346316 33346384 -33321621 + (CCA)n Simple_repeat Simple_repeat 2 69 0 303 209 109 36 chr20 33346590 33346700 -33321305 - L2 LINE L2 -25 3288 3171 1289 227 183 29 chr20 33346893 33347369 -33320636 - MLT1H LTR MaLR 0 549 1 2239 107 3 10 chr20 33348045 33348344 -33319661 - AluSx SINE Alu -15 297 1 276 200 17 0 chr20 33348365 33348425 -33319580 - LTR33A LTR ERVL 0 523 463 726 142 15 30 chr20 33348427 33348561 -33319444 - FLAM_C SINE Alu -1 132 1 2068 157 0 3 chr20 33348688 33348993 -33319012 - AluJb SINE Alu -8 304 1 1782 172 0 0 chr20 33349040 33349313 -33318692 + AluJb SINE Alu 1 273 -39 2430 109 0 3 chr20 33349455 33349767 -33318238 - AluSx SINE Alu -1 311 1 1064 226 26 0 chr20 33349822 33350056 -33317949 - MIR SINE MIR 0 262 23 1306 267 70 53 chr20 33350530 33351017 -33316988 - MLT1J LTR MaLR -14 497 3 521 242 46 50 chr20 33351358 33351608 -33316397 - L2 LINE L2 -307 3006 2738 2351 86 3 0 chr20 33352393 33352683 -33315322 - AluSp SINE Alu -22 291 1 591 266 78 0 chr20 33352686 33352857 -33315148 - MER113 DNA MER1_type? -43 478 285 372 43 0 0 chr20 33352857 33352903 -33315102 + (GA)n Simple_repeat Simple_repeat 1 46 0 591 266 78 0 chr20 33352903 33352949 -33315056 - MER113 DNA MER1_type? -236 285 244 916 199 73 34 chr20 33352950 33353156 -33314849 - MER20 DNA MER1_type 0 219 6 953 150 4 97 chr20 33353175 33353220 -33314785 + MER3 DNA MER1_type 4 52 -157 2378 109 0 0 chr20 33353220 33353522 -33314483 + AluSx SINE Alu 1 302 -10 953 150 4 97 chr20 33353522 33353645 -33314360 + MER3 DNA MER1_type 52 148 -61 2217 134 0 0 chr20 33353645 33353943 -33314062 - AluJb SINE Alu -14 298 1 953 150 4 97 chr20 33353943 33354000 -33314005 + MER3 DNA MER1_type 148 209 0 869 218 0 0 chr20 33354083 33354248 -33313757 - FRAM SINE Alu -1 175 11 252 180 99 54 chr20 33354249 33354320 -33313685 - MER113 DNA MER1_type? -392 129 54 553 263 32 55 chr20 33354320 33354365 -33313640 - MLT1L LTR MaLR 0 615 570 2282 114 3 0 chr20 33354365 33354663 -33313342 - AluSx SINE Alu -13 299 1 553 263 32 55 chr20 33354663 33354834 -33313171 - MLT1L LTR MaLR -45 570 404 368 190 0 38 chr20 33355217 33355296 -33312709 + MIR SINE MIR 74 149 -113 428 277 25 8 chr20 33355305 33355424 -33312581 - MER117 DNA MER1_type -1 196 76 632 168 37 0 chr20 33355432 33355539 -33312466 - Tigger7 DNA MER2_type -593 112 2 359 228 101 47 chr20 33355539 33355571 -33312434 + L1MC4 LINE L1 7037 7066 -976 183 80 0 0 chr20 33355571 33355596 -33312409 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 359 228 101 47 chr20 33355596 33355616 -33312389 + L1MC4 LINE L1 7066 7083 -959 3059 58 0 2 chr20 33355616 33356016 -33311989 - L1PA8 LINE L1 0 6172 5774 359 228 101 47 chr20 33356016 33356111 -33311894 + L1MC4 LINE L1 7083 7193 -849 673 245 0 50 chr20 33356111 33356270 -33311735 + Tigger3(Golem) DNA MER2_type 1 2577 -452 595 195 6 69 chr20 33356287 33356405 -33311600 - L1PB4 LINE L1 -11 6145 6038 2057 150 7 0 chr20 33356405 33356698 -33311307 - AluSx SINE Alu -17 295 1 595 195 6 69 chr20 33356698 33356738 -33311267 - L1PB4 LINE L1 -118 6038 5997 304 167 0 0 chr20 33356947 33357001 -33311004 - MER33 DNA MER1_type 0 324 271 889 112 9 0 chr20 33357001 33357117 -33310888 + AluJb SINE Alu 1 117 -195 2570 52 0 10 chr20 33357120 33357426 -33310579 - AluY SINE Alu -8 303 1 272 86 99 49 chr20 33357495 33357576 -33310429 - MER33 DNA MER1_type -46 317 233 377 256 49 0 chr20 33357579 33357661 -33310344 + L1MC4 LINE L1 6615 6700 -1342 836 66 0 0 chr20 33357661 33357767 -33310238 - AluSg/x SINE Alu -1 311 206 713 189 80 40 chr20 33357767 33357906 -33310099 - MER33 DNA MER1_type -2375 210 59 1778 172 10 17 chr20 33357906 33358225 -33309780 - AluJo SINE Alu 0 312 3 713 189 80 40 chr20 33358225 33358286 -33309719 - MER33 DNA MER1_type -2526 59 2 1879 160 6 29 chr20 33358465 33358777 -33309228 - AluJb SINE Alu -7 305 1 264 167 19 19 chr20 33358838 33358892 -33309113 - L2 LINE L2 -1 3271 3218 2374 96 0 7 chr20 33358979 33359282 -33308723 - AluSq SINE Alu -10 303 3 2143 130 0 0 chr20 33359294 33359594 -33308411 - AluSx SINE Alu -12 300 1 580 102 23 0 chr20 33360481 33360569 -33307436 - AluSg/x SINE Alu -14 296 207 * 729 99 10 0 chr20 33360567 33360668 -33307337 - AluS SINE Alu -210 102 1 526 251 97 100 chr20 33360842 33361212 -33306793 - MLT1J LTR MaLR -23 488 120 2219 112 7 0 chr20 33361226 33361522 -33306483 - AluSx SINE Alu -14 298 1 2034 145 3 0 chr20 33361526 33361822 -33306183 - AluSx SINE Alu -15 297 1 891 252 11 18 chr20 33361934 33362208 -33305797 - LTR37B LTR ERV1 0 468 197 317 203 76 38 chr20 33362348 33362427 -33305578 + MER5A DNA MER1_type 1 82 -107 234 232 0 0 chr20 33362451 33362507 -33305498 + G-rich Low_complexity Low_complexity 1 56 0 374 189 0 27 chr20 33362559 33362633 -33305372 - LTR37B LTR ERV1 -390 78 7 2321 98 0 0 chr20 33362728 33363015 -33304990 + AluSx SINE Alu 1 287 -25 654 139 74 25 chr20 33363799 33363921 -33304084 + FLAM_C SINE Alu 2 129 -14 2500 72 0 7 chr20 33363938 33364244 -33303761 + AluY SINE Alu 1 304 -7 2148 120 20 3 chr20 33364346 33364645 -33303360 - AluJb SINE Alu -8 304 1 2047 129 20 3 chr20 33364833 33365135 -33302870 + AluJo SINE Alu 1 307 -5 286 355 108 0 chr20 33365669 33365900 -33302105 - L2 LINE L2 -213 3059 2804 421 247 198 12 chr20 33366187 33366349 -33301656 - MIR SINE MIR -21 241 50 815 269 33 25 chr20 33366547 33366792 -33301213 + MIR SINE MIR 6 252 -10 265 284 23 0 chr20 33366813 33366901 -33301104 - MLT1J LTR MaLR 0 511 422 2081 114 0 56 chr20 33367097 33367421 -33300584 + AluSx SINE Alu 1 306 -6 317 280 120 51 chr20 33367432 33367607 -33300398 - L1ME4a LINE L1 0 6121 5935 365 247 100 66 chr20 33367726 33367785 -33300220 - L1MC4a LINE L1 -202 5919 5863 1827 148 72 0 chr20 33367785 33368062 -33299943 + AluJb SINE Alu 1 297 -15 365 247 100 66 chr20 33368062 33368298 -33299707 - L1MC4a LINE L1 -258 5863 5613 2318 96 3 3 chr20 33368307 33368608 -33299397 - AluY SINE Alu -10 301 1 22 35 0 0 chr20 33368608 33368637 -33299368 + AT_rich Low_complexity Low_complexity 1 29 0 1919 167 0 0 chr20 33368812 33369099 -33298906 - AluJo SINE Alu -25 287 1 31 0 0 0 chr20 33369154 33369185 -33298820 + AT_rich Low_complexity Low_complexity 1 31 0 1865 156 0 46 chr20 33369185 33369492 -33298513 - AluJb SINE Alu -19 293 1 1951 151 10 0 chr20 33369492 33369784 -33298221 - AluJb SINE Alu -17 295 1 1213 182 170 0 chr20 33369786 33369921 -33298084 - AluJo SINE Alu -16 296 185 189 0 0 0 chr20 33369921 33369942 -33298063 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1213 182 170 0 chr20 33369942 33370059 -33297946 - AluJo SINE Alu -127 185 1 1999 195 15 73 chr20 33370059 33370137 -33297868 - L1MC4 LINE L1 -209 7833 7752 1882 167 0 29 chr20 33370137 33370449 -33297556 + AluJb SINE Alu 7 309 -3 2385 97 3 3 chr20 33370452 33370762 -33297243 + AluSx SINE Alu 1 310 -2 1999 195 15 73 chr20 33370762 33371201 -33296804 - L1MC4 LINE L1 -292 7750 7342 2379 109 0 3 chr20 33371397 33371710 -33296295 - AluSx SINE Alu 0 312 1 2748 117 5 7 chr20 33372100 33372529 -33295476 - MSTA LTR MaLR 0 428 1 2385 106 0 0 chr20 33372548 33372850 -33295155 - AluSx SINE Alu -10 302 1 1119 249 82 18 chr20 33373052 33373503 -33294502 - L2 LINE L2 -114 3199 2778 2428 92 0 7 chr20 33373503 33373809 -33294196 - AluSx SINE Alu -8 304 1 1661 176 36 30 chr20 33373809 33374111 -33293894 - AluJo SINE Alu -8 304 1 1119 249 82 18 chr20 33374111 33374286 -33293719 - L2 LINE L2 -534 2779 2532 1913 146 66 0 chr20 33374791 33375079 -33292926 - AluJb SINE Alu -5 307 1 878 152 8 0 chr20 33375082 33375207 -33292798 - AluJo/FLAM SINE Alu -186 126 1 614 223 73 90 chr20 33375251 33375552 -33292453 - L1MC5 LINE L1 -312 7649 7354 295 343 169 12 chr20 33375661 33375833 -33292172 - MIR SINE MIR 0 262 64 2151 107 7 0 chr20 33375973 33376287 -33291718 + AluSp SINE Alu 1 316 0 325 326 61 0 chr20 33376506 33376638 -33291367 - L2 LINE L2 -211 3061 2922 424 233 27 34 chr20 33376998 33377144 -33290861 + CT-rich Low_complexity Low_complexity 3 147 0 634 228 7 28 chr20 33377155 33377614 -33290391 + C-rich Low_complexity Low_complexity 1 448 0 2381 97 3 3 chr20 33377706 33378015 -33289990 - AluSq SINE Alu -4 309 1 21 36 0 0 chr20 33378156 33378184 -33289821 + AT_rich Low_complexity Low_complexity 1 28 0 381 214 41 20 chr20 33378312 33378410 -33289595 + MER112 DNA MER1_type 17 116 -144 2155 126 20 0 chr20 33378435 33378736 -33289269 - AluSx SINE Alu -5 307 1 334 251 112 65 chr20 33379052 33379127 -33288878 - L1MC/D LINE L1 -1988 5820 5750 1954 101 109 7 chr20 33379127 33379403 -33288602 - AluSg SINE Alu -6 304 1 334 251 112 65 chr20 33379403 33379542 -33288463 - L1MC/D LINE L1 -2058 5750 5596 883 153 6 6 chr20 33379542 33379699 -33288306 + L1MB3 LINE L1 6025 6181 -2 2335 114 3 0 chr20 33379787 33380093 -33287912 + AluSx SINE Alu 2 308 -4 309 299 8 26 chr20 33380404 33380521 -33287484 - L1MC4a LINE L1 -1910 5898 5784 434 300 29 24 chr20 33380770 33380940 -33287065 + MIR SINE MIR 26 196 -66 291 256 13 0 chr20 33381017 33381095 -33286910 + L2 LINE L2 2458 2536 -778 555 236 162 24 chr20 33381101 33381234 -33286771 + L2 LINE L2 2651 2764 -549 2324 100 0 19 chr20 33381234 33381543 -33286462 + AluSx SINE Alu 1 303 -9 555 236 162 24 chr20 33381543 33381793 -33286212 + L2 LINE L2 2764 3073 -240 1740 133 125 0 chr20 33382178 33382442 -33285563 - AluSx SINE Alu -5 297 1 231 214 272 29 chr20 33382834 33382937 -33285068 - L2 LINE L2 -34 3238 3111 1019 153 27 68 chr20 33383127 33383172 -33284833 - MER20 DNA MER1_type 0 219 174 2308 93 3 7 chr20 33383172 33383473 -33284532 - AluSx SINE Alu -12 300 1 1019 153 27 68 chr20 33383473 33383649 -33284356 - MER20 DNA MER1_type -45 174 7 188 292 50 58 chr20 33383678 33383798 -33284207 + MIR3 SINE MIR 6 124 -84 * 398 251 96 18 chr20 33383787 33384026 -33283979 - L2 LINE L2 -294 3019 2761 891 258 19 0 chr20 33385142 33385355 -33282650 + MIR SINE MIR 36 252 -10 2317 117 0 0 chr20 33385507 33385807 -33282198 + AluSx SINE Alu 1 300 -12 1109 158 0 27 chr20 33385807 33385991 -33282014 + AluJb SINE Alu 134 312 0 602 260 32 7 chr20 33386774 33386928 -33281077 - MIR SINE MIR -92 170 13 2243 109 0 13 chr20 33387092 33387396 -33280609 + AluSq SINE Alu 1 300 -13 394 202 79 44 chr20 33387535 33387649 -33280356 - MIR SINE MIR -85 177 60 1863 90 23 30 chr20 33387705 33388009 -33279996 + AluSc SINE Alu 27 309 0 1903 118 15 90 chr20 33388143 33388475 -33279530 + AluSx SINE Alu 3 309 -3 715 255 22 5 chr20 33388475 33388659 -33279346 + MIR SINE MIR 22 208 -54 311 314 51 0 chr20 33388774 33388892 -33279113 + L1M4 LINE L1 4072 4195 -1951 2044 127 0 7 chr20 33388992 33389310 -33278695 + AluSg SINE Alu 1 316 0 709 250 121 8 chr20 33389311 33389567 -33278438 + L2 LINE L2 3028 3312 -1 181 250 58 0 chr20 33390071 33390123 -33277882 - MIR SINE MIR -69 139 85 610 257 96 54 chr20 33390164 33390587 -33277418 - L2 LINE L2 0 3313 2705 309 183 0 0 chr20 33390608 33390668 -33277337 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 2073 129 28 0 chr20 33390696 33390983 -33277022 - AluSx SINE Alu -17 295 1 293 310 23 0 chr20 33390987 33391074 -33276931 - L2 LINE L2 -602 2712 2624 1856 169 164 2 chr20 33391075 33391507 -33276498 - MLT1D LTR MaLR -1 504 3 794 186 0 0 chr20 33391507 33391647 -33276358 - L2 LINE L2 -686 2628 2489 720 218 166 26 chr20 33392070 33392299 -33275706 + MIR SINE MIR 2 262 0 491 271 96 30 chr20 33392306 33392444 -33275561 + MIR SINE MIR 51 207 -55 2160 144 0 0 chr20 33392444 33392756 -33275249 + AluJb SINE Alu 1 312 0 491 271 96 30 chr20 33392756 33392816 -33275189 + MIR SINE MIR 207 262 0 213 286 286 0 chr20 33392920 33393004 -33275001 - MIR SINE MIR -108 154 47 2463 65 10 19 chr20 33393074 33393381 -33274624 + AluSq SINE Alu 1 304 -9 1388 135 166 15 chr20 33393390 33393649 -33274356 + AluSg SINE Alu 1 298 -2 1253 153 4 69 chr20 33393649 33393687 -33274318 - L1MB5 LINE L1 -9 6165 6126 2246 106 3 10 chr20 33393687 33393990 -33274015 + AluSx SINE Alu 1 301 -11 1253 153 4 69 chr20 33393990 33394212 -33273793 - L1MB5 LINE L1 -48 6126 5922 1861 138 0 38 chr20 33394226 33394517 -33273488 - AluJo SINE Alu -32 280 1 4325 199 41 11 chr20 33394517 33395486 -33272519 - L1M4 LINE L1 -1195 4951 3950 197 33 33 0 chr20 33395486 33395516 -33272489 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 4325 199 41 11 chr20 33395516 33395537 -33272468 - L1M4 LINE L1 -2196 3950 3931 2360 82 14 0 chr20 33395635 33395929 -33272076 - AluSp SINE Alu -15 298 1 434 223 32 11 chr20 33395984 33396078 -33271927 + MIR SINE MIR 78 173 -89 1864 180 3 3 chr20 33396183 33396494 -33271511 - AluJo SINE Alu -1 311 1 2103 122 0 7 chr20 33396501 33396829 -33271176 - AluSx SINE Alu 0 326 1 1041 239 105 0 chr20 33396862 33397176 -33270829 - L1ME3 LINE L1 -3 6159 5813 442 272 6 83 chr20 33397336 33397415 -33270590 - MER117 DNA MER1_type -3 194 135 1944 162 3 0 chr20 33397415 33397712 -33270293 - AluJo SINE Alu -14 298 1 442 272 6 83 chr20 33397712 33397812 -33270193 - MER117 DNA MER1_type -62 135 29 2107 147 11 40 chr20 33397813 33398188 -33269817 + THE1B LTR MaLR 1 364 0 2541 56 0 3 chr20 33398958 33399264 -33268741 - AluY SINE Alu -1 310 6 439 282 141 47 chr20 33399596 33399830 -33268175 - MIR SINE MIR 0 262 7 232 218 0 18 chr20 33399849 33399904 -33268101 - L2 LINE L2 -287 2985 2932 346 264 39 62 chr20 33399918 33400008 -33267997 + MIR SINE MIR 98 186 -76 2418 93 0 0 chr20 33400008 33400308 -33267697 - AluSg SINE Alu -10 300 1 346 264 39 62 chr20 33400308 33400346 -33267659 + MIR SINE MIR 186 223 -39 4825 137 31 24 chr20 33400412 33400927 -33267078 - Tigger7 DNA MER2_type 0 2487 1977 1963 171 0 3 chr20 33400927 33401232 -33266773 - AluJb SINE Alu -8 304 1 4825 137 31 24 chr20 33401232 33401248 -33266757 - Tigger7 DNA MER2_type -510 1977 1963 2261 120 13 0 chr20 33401248 33401549 -33266456 - AluSx SINE Alu -7 305 1 4825 137 31 24 chr20 33401549 33401883 -33266122 - Tigger7 DNA MER2_type -524 1963 1615 1978 159 3 0 chr20 33401898 33402194 -33265811 - AluJo SINE Alu -15 297 1 2477 60 0 3 chr20 33402203 33402501 -33265504 - AluY SINE Alu -14 297 1 2623 36 0 10 chr20 33402501 33402805 -33265200 - AluY SINE Alu -10 301 1 2204 112 0 42 chr20 33402812 33403124 -33264881 - AluSq SINE Alu -14 299 1 1186 156 5 14 chr20 33403126 33403338 -33264667 - Tigger7 DNA MER2_type -1685 802 593 3038 173 67 2 chr20 33403391 33403962 -33264043 - Tigger7 DNA MER2_type -1879 608 1 313 253 7 34 chr20 33404375 33404495 -33263510 + G-rich Low_complexity Low_complexity 6 123 -24 291 28 0 0 chr20 33404495 33404531 -33263474 + (CCGAG)n Simple_repeat Simple_repeat 3 38 0 313 253 7 34 chr20 33404531 33404556 -33263449 + G-rich Low_complexity Low_complexity 123 147 0 406 292 89 12 chr20 33405258 33405426 -33262579 + MIR3 SINE MIR 12 192 -16 209 196 87 0 chr20 33405804 33405850 -33262155 + MIR SINE MIR 67 116 -92 208 211 0 0 chr20 33405869 33405907 -33262098 + L2 LINE L2 3261 3298 -15 641 304 137 21 chr20 33405965 33406647 -33261358 - L2 LINE L2 -10 3303 2540 2295 99 0 0 chr20 33406812 33407130 -33260875 - AluSg SINE Alu 0 318 1 1545 174 60 30 chr20 33407744 33408043 -33259962 - AluJo SINE Alu -4 308 1 614 268 132 0 chr20 33408192 33408382 -33259623 + MIR SINE MIR 47 261 -1 349 275 54 62 chr20 33408392 33408650 -33259355 - L2 LINE L2 -685 2629 2374 452 269 59 8 chr20 33408691 33408810 -33259195 + L2 LINE L2 3147 3271 -1 255 203 68 0 chr20 33408809 33408868 -33259137 - MIR SINE MIR -86 176 114 * 205 305 42 32 chr20 33408970 33409065 -33258940 - L2 LINE L2 -5 3267 3172 296 333 44 9 chr20 33409273 33409387 -33258618 - L2 LINE L2 0 3313 3196 208 276 46 23 chr20 33409401 33409488 -33258517 + MIR SINE MIR 151 239 -23 557 286 42 21 chr20 33411049 33411238 -33256767 + MIR SINE MIR 41 233 -29 498 281 38 71 chr20 33411462 33411672 -33256333 - L3 LINE CR1 -42 1535 1333 573 281 82 63 chr20 33411811 33412007 -33255998 - L3 LINE CR1 -257 1320 1116 2388 95 0 7 chr20 33412007 33412311 -33255694 - AluSx SINE Alu -10 302 1 573 281 82 63 chr20 33412311 33412384 -33255621 - L3 LINE CR1 -461 1116 1046 423 357 7 0 chr20 33412764 33412907 -33255098 + MIR SINE MIR 5 148 -114 329 226 267 75 chr20 33412932 33412985 -33255020 + MER5A DNA MER1_type 9 51 -138 2415 81 0 34 chr20 33412985 33413305 -33254700 + AluY SINE Alu 1 309 -2 329 226 267 75 chr20 33413305 33413397 -33254608 + MER5A DNA MER1_type 51 182 -7 273 310 63 42 chr20 33413550 33413692 -33254313 - L2 LINE L2 -4 3309 3165 2424 96 0 0 chr20 33414204 33414506 -33253499 + AluSx SINE Alu 1 302 -10 671 203 7 43 chr20 33414742 33414880 -33253125 + AluJo SINE Alu 2 134 -178 1726 172 19 25 chr20 33414910 33415224 -33252781 - AluJb SINE Alu 0 312 1 2229 94 0 14 chr20 33415233 33415544 -33252461 - AluSx SINE Alu 0 307 1 2373 95 20 3 chr20 33415881 33416187 -33251818 - AluY SINE Alu 0 311 1 258 330 53 0 chr20 33416305 33416399 -33251606 - MIR SINE MIR -52 210 112 1767 161 0 25 chr20 33416491 33416640 -33251365 - AluJo SINE Alu -33 279 139 1838 134 30 37 chr20 33416640 33416939 -33251066 - AluSx SINE Alu -15 297 1 1767 161 0 25 chr20 33416939 33417075 -33250930 - AluJo SINE Alu -173 139 1 223 262 159 90 chr20 33417289 33417434 -33250571 - MIR3 SINE MIR -49 159 5 1087 147 27 71 chr20 33417754 33417979 -33250026 - MER20 DNA MER1_type -1 218 4 221 308 87 70 chr20 33418051 33418223 -33249782 - MIR3 SINE MIR -11 197 23 181 318 91 15 chr20 33419149 33419215 -33248790 - L2 LINE L2 -89 3183 3113 371 292 80 29 chr20 33420295 33420432 -33247573 + MIR3 SINE MIR 57 200 -8 420 273 91 28 chr20 33421280 33421423 -33246582 - MIR3 SINE MIR -27 181 30 230 222 105 117 chr20 33421672 33421834 -33246171 + MIR SINE MIR 73 232 -30 451 202 65 8 chr20 33421874 33421998 -33246007 - L1ME3 LINE L1 -1 6161 6031 296 297 93 25 chr20 33422097 33422215 -33245790 - L2 LINE L2 -2 3270 3145 346 188 197 51 chr20 33423064 33423181 -33244824 - MIR3 SINE MIR -31 177 44 1427 193 32 98 chr20 33423474 33423874 -33244131 - MLT1A2 LTR MaLR 0 374 1 1670 192 7 7 chr20 33424033 33424195 -33243810 - AluJb SINE Alu -5 307 143 2183 79 55 17 chr20 33424195 33424485 -33243520 - AluSx SINE Alu -11 301 1 1670 192 7 7 chr20 33424485 33424629 -33243376 - AluJb SINE Alu -168 144 1 956 153 0 7 chr20 33424629 33424773 -33243232 - AluJo SINE Alu -169 143 1 2087 125 0 42 chr20 33425875 33426188 -33241817 - AluJo SINE Alu -12 300 1 416 353 106 28 chr20 33426346 33426808 -33241197 + L2 LINE L2 2378 2875 -439 207 239 107 122 chr20 33426880 33427077 -33240928 + L2 LINE L2 3067 3260 -12 674 232 98 21 chr20 33427117 33427402 -33240603 - L1MEc LINE L1 -2749 3466 3160 1175 157 25 60 chr20 33427402 33427637 -33240368 - AluJo SINE Alu -4 308 82 1019 211 72 0 chr20 33427637 33427892 -33240113 - L1MEc LINE L1 -3060 3155 2879 2133 112 23 10 chr20 33427892 33428195 -33239810 - AluSx SINE Alu -5 307 1 849 269 141 28 chr20 33428246 33428761 -33239244 - L1MEc LINE L1 -4826 1570 984 2361 126 86 20 chr20 33428761 33429166 -33238839 - MSTB1 LTR MaLR 0 432 1 849 269 141 28 chr20 33429166 33429219 -33238786 - L1MEc LINE L1 -5412 984 938 1949 244 60 24 chr20 33429353 33429932 -33238073 - L1MEc LINE L1 -5604 792 193 249 244 0 0 chr20 33430001 33430046 -33237959 - L1MEc LINE L1 -6314 82 38 311 327 122 6 chr20 33430051 33430207 -33237798 + MIR SINE MIR 46 219 -43 860 154 0 7 chr20 33430237 33430473 -33237532 + AluJb SINE Alu 2 305 -7 473 291 24 24 chr20 33431022 33431187 -33236818 - MIR3 SINE MIR -19 189 25 189 275 44 33 chr20 33431224 33431315 -33236690 + MIR SINE MIR 47 138 -124 747 263 37 71 chr20 33431405 33431702 -33236303 - MER102b DNA MER1_type -23 318 32 576 250 61 17 chr20 33432867 33433047 -33234958 + MIR SINE MIR 20 207 -55 1214 98 0 0 chr20 33433204 33433357 -33234648 + AluSg/x SINE Alu 140 292 -18 211 298 131 8 chr20 33433519 33433645 -33234360 - MIR SINE MIR -61 147 20 203 156 0 0 chr20 33433781 33433813 -33234192 + T-rich Low_complexity Low_complexity 4 35 0 381 230 11 11 chr20 33433899 33433986 -33234019 - MIR SINE MIR -30 232 146 356 294 18 53 chr20 33435055 33435225 -33232780 + MIR3 SINE MIR 43 206 -2 372 83 0 0 chr20 33435363 33435411 -33232594 - 5S rRNA rRNA -73 48 1 185 328 16 16 chr20 33437465 33437526 -33230479 - L2 LINE L2 -22 3250 3190 2381 92 0 3 chr20 33437854 33438158 -33229847 - AluY SINE Alu -8 303 1 208 305 114 19 chr20 33438214 33438319 -33229686 + MIR SINE MIR 19 133 -75 2282 90 0 20 chr20 33438421 33438720 -33229285 - AluSx SINE Alu -17 295 3 342 247 187 20 chr20 33439245 33439395 -33228610 + MIR SINE MIR 4 178 -84 1085 217 154 53 chr20 33440006 33440537 -33227468 - MER34C LTR ERV1 0 585 1 241 225 75 92 chr20 33440575 33440695 -33227310 + MIR3 SINE MIR 6 123 -85 377 305 8 0 chr20 33440873 33440991 -33227014 - L1ME LINE L1 -459 5662 5544 362 248 50 21 chr20 33441973 33442114 -33225891 - MIR3 SINE MIR -12 196 52 2384 103 6 3 chr20 33442416 33442727 -33225278 + AluSx SINE Alu 1 312 0 945 181 11 43 chr20 33442847 33442875 -33225130 + MER58A DNA MER1_type 37 64 -2356 1722 186 0 17 chr20 33442875 33443176 -33224829 - AluJo SINE Alu -16 296 1 945 181 11 43 chr20 33443176 33443335 -33224670 + MER58A DNA MER1_type 64 218 -6 247 273 124 33 chr20 33444840 33444961 -33223044 - L2 LINE L2 -1 3271 3140 768 161 52 104 chr20 33445515 33445745 -33222260 - MER20 DNA MER1_type 0 219 2 305 340 16 21 chr20 33448084 33448229 -33219776 + MIR3 SINE MIR 32 178 -30 2477 74 3 0 chr20 33448482 33448779 -33219226 - AluY SINE Alu -13 298 1 229 263 50 12 chr20 33449048 33449128 -33218877 - MLT1K LTR MaLR -6 582 500 466 198 113 0 chr20 33449128 33449234 -33218771 - L2 LINE L2 -4 3309 3192 468 298 104 65 chr20 33449238 33449366 -33218639 - MLT1L LTR MaLR -82 533 411 1956 158 30 0 chr20 33449366 33449664 -33218341 - AluJo SINE Alu -5 307 1 468 298 104 65 chr20 33449664 33450046 -33217959 - MLT1L LTR MaLR -204 411 3 2279 105 0 0 chr20 33450266 33450551 -33217454 + AluSx SINE Alu 7 291 -21 218 226 48 16 chr20 33450552 33450614 -33217391 - MER5A DNA MER1_type -120 69 6 196 206 0 29 chr20 33451229 33451297 -33216708 + GA-rich Low_complexity Low_complexity 3 68 0 1170 214 138 24 chr20 33451507 33451877 -33216128 - MLT1C LTR MaLR -50 417 6 272 206 131 19 chr20 33452445 33452552 -33215453 - MIR SINE MIR -69 139 21 354 275 9 9 chr20 33452846 33452955 -33215050 - MIR SINE MIR -70 192 84 2436 73 3 17 chr20 33453395 33453697 -33214308 - AluSx SINE Alu -14 298 1 1938 171 7 0 chr20 33453712 33454022 -33213983 + AluJo SINE Alu 1 312 0 1685 250 53 35 chr20 33454185 33454245 -33213760 - MLT1G LTR MaLR 0 590 533 2141 128 0 0 chr20 33454245 33454564 -33213441 - AluSx SINE Alu 0 320 2 1685 250 53 35 chr20 33454564 33455109 -33212896 - MLT1G LTR MaLR -57 533 3 326 188 107 40 chr20 33455171 33455320 -33212685 - Charlie7 DNA MER1_type -29 2583 2425 2512 41 0 44 chr20 33455359 33455679 -33212326 - AluY SINE Alu -5 306 1 446 202 36 0 chr20 33456853 33456937 -33211068 + MER63 DNA MER1_type 44 756 -306 981 182 11 0 chr20 33457102 33457278 -33210727 - MER45A DNA AcHobo 0 178 1 288 276 134 0 chr20 33457279 33457413 -33210592 + L2 LINE L2 2578 2729 -585 588 270 17 6 chr20 33458277 33458451 -33209554 - MIR SINE MIR -7 255 80 196 190 17 35 chr20 33458635 33458693 -33209312 + MIR SINE MIR 34 90 -172 878 214 102 30 chr20 33459216 33459622 -33208383 - MLT1D LTR MaLR 0 467 22 202 268 0 0 chr20 33460361 33460402 -33207603 + (CGTG)n Simple_repeat Simple_repeat 3 43 0 715 302 126 21 chr20 33460648 33461085 -33206920 - Charlie8 DNA MER1_type -1906 511 29 180 341 127 31 chr20 33461243 33461566 -33206439 + L2 LINE L2 2316 2669 -645 * 222 261 117 48 chr20 33461543 33461731 -33206274 + L2 LINE L2 2817 3017 -255 249 293 132 0 chr20 33461743 33461849 -33206156 + MIR SINE MIR 132 251 -11 399 327 0 0 chr20 33462556 33462657 -33205348 - L2 LINE L2 -5 3267 3167 277 319 32 0 chr20 33462657 33462751 -33205254 - L1ME LINE L1 -341 5780 5684 2071 113 19 45 chr20 33462841 33463152 -33204853 - AluSx SINE Alu -9 303 1 2327 109 0 0 chr20 33463672 33463974 -33204031 + AluSx SINE Alu 1 302 -10 361 227 57 0 chr20 33464292 33464380 -33203625 + L2 LINE L2 3208 3300 -13 293 309 154 46 chr20 33464753 33465012 -33202993 + L2 LINE L2 2926 3212 -60 30 0 0 0 chr20 33465698 33465728 -33202277 + AT_rich Low_complexity Low_complexity 1 30 0 2547 65 3 0 chr20 33465776 33466085 -33201920 + AluY SINE Alu 1 310 -1 488 279 55 12 chr20 33466429 33466594 -33201411 - MIR SINE MIR -71 191 20 180 167 0 0 chr20 33466674 33466704 -33201301 - MIR SINE MIR -119 143 114 286 267 81 0 chr20 33467491 33467577 -33200428 + MIR SINE MIR 49 141 -67 1817 155 7 24 chr20 33467700 33467818 -33200187 + AluJo SINE Alu 2 120 -192 2084 145 0 7 chr20 33467818 33468121 -33199884 - AluJb SINE Alu -11 301 1 1817 155 7 24 chr20 33468121 33468298 -33199707 + AluJo SINE Alu 120 292 -20 1861 161 52 25 chr20 33468799 33469165 -33198840 + MLT2C1 LTR ERVL 22 397 0 2321 67 0 42 chr20 33469320 33469633 -33198372 - AluY SINE Alu -11 300 1 2414 68 3 3 chr20 33470317 33470612 -33197393 + AluY SINE Alu 1 295 -16 929 162 7 19 chr20 33470614 33470768 -33197237 - FRAM SINE Alu -30 146 1 1952 159 0 25 chr20 33470787 33471101 -33196904 + AluJb SINE Alu 1 306 -6 369 0 0 0 chr20 33471510 33471551 -33196454 + (TG)n Simple_repeat Simple_repeat 1 41 0 228 35 0 0 chr20 33471552 33471581 -33196424 + (TGG)n Simple_repeat Simple_repeat 1 29 0 325 312 40 40 chr20 33471845 33472044 -33195961 - MLT1K LTR MaLR -1 587 389 448 262 77 73 chr20 33472045 33472111 -33195894 - L1MEd LINE L1 -797 1693 1629 180 0 0 0 chr20 33472111 33472131 -33195874 + (TA)n Simple_repeat Simple_repeat 2 21 0 1968 138 57 0 chr20 33472131 33472413 -33195592 - AluSx SINE Alu -14 298 1 448 262 77 73 chr20 33472413 33472671 -33195334 - L1MEd LINE L1 -861 1629 1373 1991 174 0 0 chr20 33472671 33472975 -33195030 - AluJo SINE Alu -8 304 1 448 262 77 73 chr20 33472975 33473055 -33194950 - L1MEd LINE L1 -1117 1373 1295 1722 109 80 4 chr20 33473055 33473334 -33194671 - AluSx SINE Alu 0 326 30 448 262 77 73 chr20 33473334 33473522 -33194483 - L1MEd LINE L1 -1195 1295 1032 1445 199 35 49 chr20 33473546 33473892 -33194113 + MLT1B LTR MaLR 48 388 -2 229 307 0 69 chr20 33474070 33474171 -33193834 - L1MEd LINE L1 -5779 340 247 1891 159 3 37 chr20 33474334 33474516 -33193489 - AluJo SINE Alu -2 310 142 2341 95 10 0 chr20 33474516 33474810 -33193195 - AluSp SINE Alu -14 299 3 1891 159 3 37 chr20 33474810 33474948 -33193057 - AluJo SINE Alu -170 142 1 199 274 59 0 chr20 33475125 33475176 -33192829 - MIR SINE MIR -62 146 93 691 154 77 0 chr20 33475868 33475985 -33192020 - LTR69 LTR ERVL 0 588 463 630 191 9 0 chr20 33476000 33476115 -33191890 - FLAM_C SINE Alu -26 117 2 2200 173 128 2 chr20 33476116 33476539 -33191466 - LTR69 LTR ERVL -110 478 3 2026 138 20 3 chr20 33476659 33476955 -33191050 + AluSx SINE Alu 7 307 -5 373 282 39 53 chr20 33477033 33477239 -33190766 - L1MC4a LINE L1 -1800 6008 5806 184 308 26 26 chr20 33477333 33477411 -33190594 + L2 LINE L2 2908 2985 -287 588 220 165 6 chr20 33477686 33477937 -33190068 + L2 LINE L2 2770 3070 -243 631 135 63 0 chr20 33477943 33478054 -33189951 + FLAM_C SINE Alu 16 133 -10 1709 144 51 81 chr20 33478073 33478235 -33189770 + MLT1B LTR MaLR 2 167 -223 207 0 0 0 chr20 33478235 33478258 -33189747 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2252 96 0 20 chr20 33478260 33478561 -33189444 - AluSg SINE Alu -15 295 1 1709 144 51 81 chr20 33478561 33478740 -33189265 + MLT1B LTR MaLR 168 335 -55 3332 120 15 28 chr20 33478740 33479069 -33188936 + MER1A DNA MER1_type 1 322 -2378 2427 87 0 0 chr20 33479069 33479367 -33188638 + AluSg SINE Alu 1 298 -12 3332 120 15 28 chr20 33479367 33479571 -33188434 + MER1A DNA MER1_type 322 527 0 1709 144 51 81 chr20 33479571 33479620 -33188385 + MLT1B LTR MaLR 335 384 -6 488 197 110 8 chr20 33479665 33479792 -33188213 + L2 LINE L2 3172 3311 -2 189 192 77 19 chr20 33480280 33480332 -33187673 - MIR SINE MIR -91 171 117 605 227 8 0 chr20 33480335 33480454 -33187551 + AluJb SINE Alu 159 278 -34 387 0 0 0 chr20 33480454 33480497 -33187508 + (TC)n Simple_repeat Simple_repeat 2 44 0 * 486 33 0 0 chr20 33480496 33480556 -33187449 + (TA)n Simple_repeat Simple_repeat 1 60 0 1933 112 0 4 chr20 33480600 33480858 -33187147 - AluSx SINE Alu -21 291 35 995 217 90 37 chr20 33480922 33481166 -33186839 + MIR SINE MIR 6 262 0 1284 221 49 49 chr20 33481265 33481655 -33186350 - MLT1C LTR MaLR -19 448 59 218 250 208 83 chr20 33482988 33483108 -33184897 + L2 LINE L2 3136 3270 -2 2787 264 25 35 chr20 33483119 33483798 -33184207 - L1MEc LINE L1 -4322 2800 2133 195 42 0 0 chr20 33483798 33483822 -33184183 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 2787 264 25 35 chr20 33483822 33484155 -33183850 - L1MEc LINE L1 -4989 2133 1798 1373 190 40 25 chr20 33484158 33484432 -33183573 - AluJo SINE Alu -16 296 19 892 227 0 12 chr20 33484466 33484708 -33183297 - L1MEc LINE L1 -5333 1608 1370 589 134 18 9 chr20 33484708 33484820 -33183185 + CT-rich Low_complexity Low_complexity 1 113 0 519 238 16 0 chr20 33484820 33485119 -33182886 - AluSp/q SINE Alu 0 313 188 555 325 21 4 chr20 33485148 33485382 -33182623 + L1MCc LINE L1 269 506 -5917 508 202 22 137 chr20 33485487 33485670 -33182335 + L1MCc LINE L1 835 996 -5427 667 183 0 0 chr20 33485671 33485775 -33182230 + FLAM_A SINE Alu 1 104 -38 1183 203 122 3 chr20 33485815 33486135 -33181870 + L1MCc LINE L1 1037 1394 -5029 1819 150 3 27 chr20 33486136 33486455 -33181550 + AluJb SINE Alu 1 312 0 371 204 32 11 chr20 33486467 33486560 -33181445 - L1MEc LINE L1 -6322 101 7 535 275 109 0 chr20 33486589 33486727 -33181278 + MLT1G LTR MaLR 116 268 -322 559 201 123 0 chr20 33487333 33487487 -33180518 + MER117 DNA MER1_type 16 188 -9 331 274 97 0 chr20 33487492 33487605 -33180400 - LTR16A LTR ERVL 0 450 327 348 304 36 14 chr20 33487744 33487882 -33180123 + MLT1L LTR MaLR 120 260 -355 384 291 154 4 chr20 33487950 33488177 -33179828 + MLT1L LTR MaLR 347 607 -8 2218 87 0 4 chr20 33488549 33488826 -33179179 - AluSc SINE Alu -3 306 31 422 289 47 20 chr20 33488826 33488975 -33179030 + L2 LINE L2 2645 2797 -517 401 329 7 28 chr20 33489199 33489342 -33178663 - MIR SINE MIR -109 153 14 1551 258 20 18 chr20 33489360 33489404 -33178601 + LTR16A LTR ERVL 1 43 -407 1572 189 13 91 chr20 33489404 33489800 -33178205 + MLT1A1 LTR MaLR 1 365 0 1551 258 20 18 chr20 33489800 33490204 -33177801 + LTR16A LTR ERVL 43 450 0 2158 103 0 40 chr20 33490286 33490588 -33177417 - AluSc SINE Alu -17 292 3 297 240 0 13 chr20 33490800 33490875 -33177130 + MER91B DNA MER1_type 2 75 -115 405 346 23 0 chr20 33490912 33491042 -33176963 + MIR SINE MIR 16 148 -114 2311 110 0 7 chr20 33491058 33491366 -33176639 - AluSx SINE Alu -6 306 1 756 209 17 6 chr20 33491366 33491543 -33176462 + MER104 DNA MER2_type 2 180 0 311 173 53 27 chr20 33491677 33491752 -33176253 + MIR SINE MIR 93 169 -93 2405 87 3 0 chr20 33491756 33492054 -33175951 - AluSc SINE Alu -10 299 1 1546 180 58 0 chr20 33492054 33492332 -33175673 - AluJo SINE Alu -18 294 1 269 215 195 14 chr20 33492539 33492684 -33175321 + MIR SINE MIR 35 214 -48 2222 104 0 0 chr20 33492875 33493162 -33174843 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr20 33493166 33493186 -33174819 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 284 208 10 129 chr20 33493248 33493267 -33174738 + MER21B LTR ERV1 1 21 -842 1860 116 0 8 chr20 33493267 33493518 -33174487 + AluJb SINE Alu 18 266 -46 284 208 10 129 chr20 33493518 33493599 -33174406 + MER21B LTR ERV1 21 89 -774 3314 198 66 25 chr20 33493700 33494468 -33173537 + MER21B LTR ERV1 49 848 -15 1610 165 73 0 chr20 33494491 33494763 -33173242 - AluJb SINE Alu -20 292 1 2400 106 0 0 chr20 33494775 33495078 -33172927 - AluSg SINE Alu -7 303 1 381 350 31 23 chr20 33495210 33495470 -33172535 - L3 LINE CR1 -43 1534 1273 201 74 0 0 chr20 33495531 33495558 -33172447 + (TTCC)n Simple_repeat Simple_repeat 2 28 0 2312 120 7 0 chr20 33495566 33495874 -33172131 - AluSx SINE Alu -2 310 1 434 211 65 8 chr20 33495923 33496046 -33171959 - L1ME4a LINE L1 0 6121 5992 573 294 42 42 chr20 33496072 33496402 -33171603 - L1ME4a LINE L1 -196 5925 5596 41 21 0 0 chr20 33496710 33496758 -33171247 + AT_rich Low_complexity Low_complexity 1 48 0 1379 204 91 4 chr20 33496758 33497023 -33170982 - AluJb SINE Alu -24 288 1 713 268 101 66 chr20 33497040 33497074 -33170931 - L1ME4a LINE L1 -566 5555 5524 2441 86 0 3 chr20 33497074 33497375 -33170630 + AluY SINE Alu 1 300 -11 713 268 101 66 chr20 33497375 33497527 -33170478 - L1ME4a LINE L1 -597 5524 5379 2883 10 0 0 chr20 33497527 33497834 -33170171 + AluYb8 SINE Alu 1 307 -11 713 268 101 66 chr20 33497834 33498085 -33169920 - L1ME4a LINE L1 -742 5379 5094 1974 159 3 7 chr20 33498085 33498394 -33169611 - AluJb SINE Alu -4 308 1 713 268 101 66 chr20 33498394 33498537 -33169468 - L1ME4a LINE L1 -1027 5094 4957 234 346 37 9 chr20 33498584 33498691 -33169314 - L3 LINE CR1 -401 1176 1067 518 264 57 7 chr20 33498733 33498873 -33169132 - MIR SINE MIR -79 183 37 2266 114 3 0 chr20 33499052 33499358 -33168647 - AluSx SINE Alu -5 307 1 2032 160 0 25 chr20 33499559 33499877 -33168128 + AluJo SINE Alu 3 312 0 2282 129 0 0 chr20 33500183 33500494 -33167511 - AluSx SINE Alu -1 311 1 747 268 66 7 chr20 33501553 33501825 -33166180 + LTR16A1 LTR ERVL 153 440 -17 30 27 0 0 chr20 33502013 33502050 -33165955 + AT_rich Low_complexity Low_complexity 1 37 0 1605 150 66 22 chr20 33502075 33502349 -33165656 - AluJo SINE Alu -15 297 12 1015 223 90 7 chr20 33502365 33502643 -33165362 - L1ME1 LINE L1 -37 6129 5829 525 262 135 42 chr20 33502656 33503034 -33164971 + MER65A LTR ERV1 1 413 -32 1149 252 43 0 chr20 33503149 33503474 -33164531 - L1ME1 LINE L1 -348 5818 5480 2211 133 0 16 chr20 33503533 33503848 -33164157 - AluSx SINE Alu -2 310 1 2482 78 0 13 chr20 33504450 33504757 -33163248 - AluSx SINE Alu -9 303 1 2244 105 34 0 chr20 33505849 33506145 -33161860 - AluSx SINE Alu -6 306 1 533 301 158 30 chr20 33506516 33507010 -33160995 + L2 LINE L2 2635 3212 -101 1549 205 46 116 chr20 33507014 33507038 -33160967 - L1ME3 LINE L1 -42 6120 6096 2042 135 7 10 chr20 33507038 33507334 -33160671 - AluSx SINE Alu -17 295 1 1549 205 46 116 chr20 33507334 33507869 -33160136 - L1ME3 LINE L1 -66 6096 5600 724 238 19 6 chr20 33507873 33508033 -33159972 + L2 LINE L2 3151 3312 -1 196 284 12 12 chr20 33508835 33508916 -33159089 + MIR SINE MIR 37 117 -91 1233 229 61 13 chr20 33509503 33509839 -33158166 - L1ME3 LINE L1 -8 6154 5805 1561 85 0 0 chr20 33510120 33510332 -33157673 + MSTC LTR MaLR 1 212 -216 848 150 0 50 chr20 33510336 33510476 -33157529 + FLAM_C SINE Alu 5 137 -6 1231 196 0 9 chr20 33510476 33510705 -33157300 + MSTC LTR MaLR 202 428 0 307 239 28 0 chr20 33511045 33511116 -33156889 - MER5B DNA MER1_type -78 100 28 853 200 100 38 chr20 33511124 33511334 -33156671 + MIR SINE MIR 32 254 -8 195 129 0 0 chr20 33511335 33511366 -33156639 + (CACCAT)n Simple_repeat Simple_repeat 1 31 0 348 306 22 22 chr20 33511387 33511521 -33156484 - MIR SINE MIR -55 153 20 568 70 0 70 chr20 33511624 33511710 -33156295 + MADE1 DNA Mariner 1 80 0 239 316 119 12 chr20 33511881 33512049 -33155956 + L2 LINE L2 2502 2687 -627 1579 141 119 69 chr20 33512101 33512151 -33155854 + L1MB2 LINE L1 5759 5805 -366 1721 153 47 22 chr20 33512151 33512469 -33155536 - AluJb SINE Alu 0 325 1 1825 161 3 7 chr20 33512472 33512758 -33155247 - AluJo SINE Alu -13 299 15 1579 141 119 69 chr20 33512758 33513079 -33154926 + L1MB2 LINE L1 5806 6154 -17 945 136 8 0 chr20 33513098 33513230 -33154775 - AluSq/x SINE Alu -180 133 1 2195 104 0 43 chr20 33513233 33513559 -33154446 - AluSx SINE Alu 0 312 1 279 319 42 50 chr20 33513679 33513917 -33154088 + L2 LINE L2 2842 3077 -195 1910 163 0 10 chr20 33513934 33514234 -33153771 - AluJb SINE Alu -15 297 1 2231 97 7 0 chr20 33514243 33514532 -33153473 - AluSc SINE Alu -18 291 1 195 42 0 0 chr20 33514546 33514570 -33153435 + (CCA)n Simple_repeat Simple_repeat 3 26 0 563 327 101 14 chr20 33514576 33514784 -33153221 - MIR SINE MIR -6 256 31 203 342 79 46 chr20 33514799 33514951 -33153054 + L2 LINE L2 3091 3247 -25 270 136 0 0 chr20 33515518 33515562 -33152443 + (TCCCC)n Simple_repeat Simple_repeat 5 48 0 3601 232 61 16 chr20 33515646 33515930 -33152075 - L2 LINE L2 -465 2849 2579 1081 154 0 18 chr20 33515930 33516099 -33151906 - FRAM SINE Alu 0 166 1 3601 232 61 16 chr20 33516099 33516745 -33151260 - L2 LINE L2 -735 2579 1877 1294 189 8 44 chr20 33516906 33517154 -33150851 - MER8 DNA MER2_type 0 239 1 402 240 50 0 chr20 33517412 33517512 -33150493 + MER91C DNA MER1_type 36 140 0 578 258 137 63 chr20 33517891 33518318 -33149687 - MLT1J LTR MaLR 0 468 31 1938 168 3 13 chr20 33518408 33518717 -33149288 + AluJo SINE Alu 1 306 -6 260 218 0 26 chr20 33518726 33518804 -33149201 + GA-rich Low_complexity Low_complexity 4 79 0 227 268 0 0 chr20 33519294 33519350 -33148655 + CT-rich Low_complexity Low_complexity 3 58 0 733 299 140 35 chr20 33519385 33519870 -33148135 - MLT1K LTR MaLR -15 573 38 1981 142 17 0 chr20 33519870 33520166 -33147839 + AluJo SINE Alu 1 301 -11 2593 80 0 0 chr20 33520166 33520478 -33147527 + AluSx SINE Alu 1 312 0 282 264 150 14 chr20 33520684 33520824 -33147181 - MIR3 SINE MIR -32 176 18 1076 184 15 113 chr20 33521520 33521654 -33146351 - MLT1B LTR MaLR 0 390 244 1293 156 145 50 chr20 33521654 33521795 -33146210 - AluJb SINE Alu -1 311 185 2201 104 0 58 chr20 33521795 33522123 -33145882 - AluSx SINE Alu -2 310 2 1293 156 145 50 chr20 33522123 33522263 -33145742 - AluJb SINE Alu -127 185 3 1076 184 15 113 chr20 33522263 33522455 -33145550 - MLT1B LTR MaLR -146 244 96 1239 77 0 41 chr20 33522464 33522634 -33145371 - AluSq SINE Alu -18 295 133 459 113 14 0 chr20 33522693 33522764 -33145241 - MLT1B LTR MaLR -318 72 1 1401 206 98 24 chr20 33522874 33523253 -33144752 + LTR16C LTR ERVL 78 484 -7 999 145 155 5 chr20 33523965 33524165 -33143840 - MER30 DNA MER1_type 0 230 1 2350 101 7 0 chr20 33524271 33524579 -33143426 + AluSx SINE Alu 3 312 0 213 231 67 0 chr20 33524969 33525073 -33142932 + (CTGGGG)n Simple_repeat Simple_repeat 3 113 0 2323 103 3 3 chr20 33525485 33525785 -33142220 + AluSp SINE Alu 1 300 -13 1891 100 6 118 chr20 33526139 33526478 -33141527 - AluSx SINE Alu -11 301 1 463 198 228 15 chr20 33526704 33526901 -33141104 + MLT1H LTR MaLR 83 321 -228 2009 110 35 0 chr20 33527158 33527440 -33140565 + AluSp SINE Alu 1 292 -21 207 100 0 0 chr20 33527440 33527470 -33140535 + (GGAA)n Simple_repeat Simple_repeat 1 30 0 3195 68 52 5 chr20 33527476 33527859 -33140146 + MLT2A1 LTR ERVL 1 407 -37 240 35 0 0 chr20 33527859 33527888 -33140117 + (TA)n Simple_repeat Simple_repeat 2 30 0 3195 68 52 5 chr20 33527888 33527928 -33140077 + MLT2A1 LTR ERVL 407 444 0 331 290 116 19 chr20 33528165 33528320 -33139685 - L2 LINE L2 -3 3269 3100 394 345 39 4 chr20 33528864 33529093 -33138912 + L1ME3 LINE L1 5688 5924 -238 23 33 0 0 chr20 33529097 33529127 -33138878 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr20 33529294 33529318 -33138687 + AT_rich Low_complexity Low_complexity 1 24 0 362 291 51 97 chr20 33529492 33529729 -33138276 - MIR SINE MIR -16 246 21 470 219 75 41 chr20 33529768 33529914 -33138091 - MER5B DNA MER1_type -27 151 1 21 36 0 0 chr20 33530192 33530220 -33137785 + AT_rich Low_complexity Low_complexity 1 28 0 2094 117 3 55 chr20 33530239 33530564 -33137441 - AluSx SINE Alu -4 308 1 598 224 58 19 chr20 33530585 33530790 -33137215 + MER113 DNA MER1_type? 1 213 -308 277 246 0 62 chr20 33530804 33530869 -33137136 + MER113 DNA MER1_type? 458 518 -3 568 262 9 61 chr20 33530930 33531035 -33136970 + L2 LINE L2 2597 2687 -627 2242 114 3 10 chr20 33531035 33531342 -33136663 - AluSq SINE Alu -8 305 1 568 262 9 61 chr20 33531342 33531450 -33136555 + L2 LINE L2 2687 2799 -515 348 200 0 0 chr20 33531461 33531521 -33136484 + MER5A DNA MER1_type 11 70 -119 1018 130 49 0 chr20 33531524 33531686 -33136319 + FRAM SINE Alu 2 171 -5 383 167 271 10 chr20 33531686 33531782 -33136223 + MER5A DNA MER1_type 67 187 -2 * 490 226 44 0 chr20 33531782 33531917 -33136088 + L2 LINE L2 2829 2969 -345 2259 104 0 0 chr20 33531966 33532274 -33135731 - AluSx SINE Alu -4 308 1 1434 133 157 126 chr20 33532528 33532942 -33135063 + MSTA LTR MaLR 1 427 -1 534 268 123 77 chr20 33533198 33533310 -33134695 + L2 LINE L2 2966 3071 -242 1502 171 31 11 chr20 33533310 33533597 -33134408 - AluJo SINE Alu -19 293 1 534 268 123 77 chr20 33533597 33533809 -33134196 + L2 LINE L2 3071 3305 -8 1121 121 5 45 chr20 33534265 33534464 -33133541 - AluSg/x SINE Alu 0 310 120 2014 110 4 0 chr20 33534468 33534772 -33133233 - AluSx SINE Alu 0 305 1 1834 150 7 0 chr20 33534778 33535071 -33132934 - AluJb SINE Alu -17 295 1 679 203 39 44 chr20 33535553 33535735 -33132270 + MLT1D LTR MaLR 2 182 -323 813 112 0 0 chr20 33535745 33535861 -33132144 + AluJb SINE Alu 1 116 -196 2227 113 0 0 chr20 33535861 33536171 -33131834 - AluSx SINE Alu -2 310 1 1590 195 13 0 chr20 33536273 33536580 -33131425 - AluJo SINE Alu -1 311 1 232 170 0 64 chr20 33536963 33537010 -33130995 + L2 LINE L2 3221 3264 -8 311 110 0 137 chr20 33537036 33537109 -33130896 + Zaphod DNA AcHobo 1 63 -3968 2063 136 3 0 chr20 33537346 33537654 -33130351 + AluSx SINE Alu 1 309 -3 244 39 0 115 chr20 33537706 33537758 -33130247 - Alu SINE Alu 0 301 256 2319 163 41 5 chr20 33538405 33538816 -33129189 - MSTB LTR MaLR 0 426 1 846 314 70 32 chr20 33539451 33539977 -33128028 + MLT1K LTR MaLR 25 570 -18 1828 135 40 17 chr20 33540152 33540449 -33127556 - AluSx SINE Alu -8 304 1 336 258 174 36 chr20 33541075 33541242 -33126763 + L2 LINE L2 3124 3313 0 460 265 53 0 chr20 33541361 33541493 -33126512 - MER117 DNA MER1_type -2 195 57 883 244 122 36 chr20 33541569 33542054 -33125951 + MLT1G1 LTR MaLR 1 555 0 255 341 40 52 chr20 33542715 33542888 -33125117 + MIR SINE MIR 22 192 -70 1065 161 0 0 chr20 33543031 33543205 -33124800 + FRAM SINE Alu 1 173 -3 897 147 0 0 chr20 33543346 33543475 -33124530 - FLAM_C SINE Alu -4 129 1 874 248 64 60 chr20 33543505 33543652 -33124353 + MIR SINE MIR 12 162 -100 1443 170 0 93 chr20 33543652 33543976 -33124029 - AluJo SINE Alu -16 296 3 874 248 64 60 chr20 33543976 33544078 -33123927 + MIR SINE MIR 162 262 0 1994 103 146 70 chr20 33544544 33544712 -33123293 + MSTA LTR MaLR 1 155 -273 2359 91 0 0 chr20 33544712 33545019 -33122986 + AluSc SINE Alu 2 308 -1 1994 103 146 70 chr20 33545019 33545248 -33122757 + MSTA LTR MaLR 155 428 0 1787 154 11 0 chr20 33545317 33545602 -33122403 + AluJo SINE Alu 1 288 -24 1761 140 0 11 chr20 33546151 33546430 -33121575 - AluJo SINE Alu -36 276 1 432 303 64 25 chr20 33546432 33546713 -33121292 + L1MEd LINE L1 90 381 -5738 2295 106 0 3 chr20 33547238 33547549 -33120456 - AluSx SINE Alu -2 310 1 225 65 0 0 chr20 33547633 33547664 -33120341 + (TAAAA)n Simple_repeat Simple_repeat 3 33 0 674 104 74 74 chr20 33548883 33548965 -33119040 - MER33 DNA MER1_type -2283 341 260 1586 171 38 0 chr20 33548965 33549085 -33118920 + AluJb SINE Alu 1 115 -197 423 0 0 0 chr20 33549085 33549132 -33118873 + (CA)n Simple_repeat Simple_repeat 2 48 0 1586 171 38 0 chr20 33549132 33549298 -33118707 + AluJb SINE Alu 115 298 -14 674 104 74 74 chr20 33549298 33549378 -33118627 - MER33 DNA MER1_type -2363 261 179 238 122 49 0 chr20 33549531 33549572 -33118433 - MER33 DNA MER1_type -187 137 95 804 138 0 16 chr20 33549572 33549695 -33118310 - FRAM SINE Alu -23 153 33 586 148 30 0 chr20 33549695 33549796 -33118209 - MER33 DNA MER1_type -220 104 1 2056 103 4 0 chr20 33549913 33550194 -33117811 + AluSx SINE Alu 9 290 -22 2005 174 101 73 chr20 33550213 33550400 -33117605 + L1MB7 LINE L1 4868 5048 -1132 2329 93 0 0 chr20 33550400 33550710 -33117295 + AluSg SINE Alu 1 310 0 2005 174 101 73 chr20 33550710 33550889 -33117116 + L1MB7 LINE L1 5048 5221 -959 1796 131 0 53 chr20 33550889 33551209 -33116796 - AluJo SINE Alu -9 303 1 2005 174 101 73 chr20 33551209 33551359 -33116646 + L1MB7 LINE L1 5221 5365 -815 2052 125 3 6 chr20 33551359 33551671 -33116334 + AluSx SINE Alu 1 311 -1 2005 174 101 73 chr20 33551671 33551996 -33116009 + L1MB7 LINE L1 5365 5785 -395 1635 161 0 43 chr20 33551996 33552300 -33115705 + AluJb SINE Alu 2 292 -20 2514 46 0 3 chr20 33552307 33552611 -33115394 + AluY SINE Alu 2 304 -7 1953 120 20 3 chr20 33552622 33552921 -33115084 + AluSx SINE Alu 1 304 -8 455 172 32 0 chr20 33552921 33553014 -33114991 + L1MB7 LINE L1 6073 6168 -16 973 217 127 28 chr20 33553047 33553481 -33114524 + HAL1b LINE L1 754 1230 -118 1779 139 0 20 chr20 33554109 33554457 -33113548 + AluSx SINE Alu 1 312 0 1871 133 0 7 chr20 33554461 33554774 -33113231 + AluSx SINE Alu 2 312 0 402 291 0 67 chr20 33554859 33554989 -33113016 - MIR SINE MIR -61 201 83 1886 117 0 37 chr20 33554989 33555289 -33112716 + AluSx SINE Alu 1 289 -23 402 291 0 67 chr20 33555289 33555323 -33112682 - MIR SINE MIR -179 83 48 1354 118 0 5 chr20 33556381 33556576 -33111429 - AluSx SINE Alu -118 194 1 2135 213 75 14 chr20 33556936 33557425 -33110580 - MLT1H LTR MaLR 0 549 31 1438 249 43 12 chr20 33557425 33557792 -33110213 - LTR16A LTR ERVL -3 452 53 421 35 18 0 chr20 33558696 33558753 -33109252 + LTR12 LTR ERV1 1 58 -656 2306 114 0 0 chr20 33558753 33559070 -33108935 + LTR12 LTR ERV1 398 714 0 2138 113 6 6 chr20 33559506 33559817 -33108188 + AluSq SINE Alu 1 311 -2 849 280 10 10 chr20 33560210 33560417 -33107588 + LTR33 LTR ERVL 14 220 -301 362 279 19 39 chr20 33560453 33560607 -33107398 + LTR33 LTR ERVL 295 445 -76 938 174 0 0 chr20 33560615 33560776 -33107229 + AluJb SINE Alu 137 297 -15 563 262 33 111 chr20 33560879 33561123 -33106882 + LTR67 LTR ERVL 1 225 -332 1901 133 0 11 chr20 33561126 33561404 -33106601 + AluSx SINE Alu 2 276 -36 2120 110 0 16 chr20 33561406 33561738 -33106267 - AluSx SINE Alu 0 312 1 180 0 0 0 chr20 33561776 33561796 -33106209 + (CAA)n Simple_repeat Simple_repeat 3 22 0 472 295 115 10 chr20 33561998 33562198 -33105807 + LTR67 LTR ERVL 331 551 -6 204 111 0 0 chr20 33562307 33562343 -33105662 + (TC)n Simple_repeat Simple_repeat 1 36 0 666 302 73 4 chr20 33562399 33562644 -33105361 + MIR SINE MIR 1 262 0 700 265 105 4 chr20 33562815 33563053 -33104952 - Charlie8 DNA MER1_type -2145 272 11 469 265 72 72 chr20 33563370 33563823 -33104182 - MLT1L LTR MaLR -72 543 2 2172 117 0 3 chr20 33563917 33564225 -33103780 + AluSp SINE Alu 1 307 -6 618 266 13 16 chr20 33564811 33564994 -33103011 + MIR SINE MIR 18 191 -63 * 1184 197 22 4 chr20 33564989 33565217 -33102788 - MIR SINE MIR 0 262 31 959 162 17 12 chr20 33565290 33565463 -33102542 + MER3 DNA MER1_type 1 127 -82 2046 142 0 0 chr20 33565463 33565773 -33102232 + AluSx SINE Alu 1 310 -2 841 193 0 12 chr20 33565780 33565941 -33102064 - L1M4 LINE L1 -2304 3842 3684 * 857 291 68 20 chr20 33565926 33566415 -33101590 - L1MDa LINE L1 -1949 6253 3 2319 83 0 0 chr20 33566513 33566814 -33101191 - AluSx SINE Alu -11 301 1 501 243 9 9 chr20 33566873 33566980 -33101025 + FLAM_A SINE Alu 8 114 -28 424 345 49 20 chr20 33567089 33567335 -33100670 - L1M4 LINE L1 -1199 4947 4695 2464 68 3 0 chr20 33567360 33567670 -33100335 - AluSp SINE Alu -2 311 1 679 172 25 8 chr20 33567682 33567804 -33100201 - FLAM_C SINE Alu -18 125 2 5193 113 17 66 chr20 33567822 33568494 -33099511 + Tigger3b DNA MER2_type 338 953 -2075 2090 100 4 0 chr20 33568494 33568775 -33099230 - AluSx SINE Alu -30 282 1 5193 113 17 66 chr20 33568775 33569041 -33098964 + Tigger3b DNA MER2_type 953 1230 -1 372 241 26 26 chr20 33569045 33569202 -33098803 + L1MC4 LINE L1 1995 6983 -1339 34 24 0 0 chr20 33569221 33569262 -33098743 + AT_rich Low_complexity Low_complexity 1 41 0 247 299 38 83 chr20 33569262 33569657 -33098348 - L1M4 LINE L1 -1603 4543 4167 61 73 0 0 chr20 33570183 33570307 -33097698 + AT_rich Low_complexity Low_complexity 1 124 0 1678 186 3 10 chr20 33570391 33570697 -33097308 + AluJo SINE Alu 1 304 -8 1616 169 135 22 chr20 33570730 33571086 -33096919 - MSTD LTR MaLR 0 396 1 723 240 60 10 chr20 33571185 33571385 -33096620 + L1MC5 LINE L1 7718 7927 -34 1118 85 146 0 chr20 33571648 33571813 -33096192 + AluSx SINE Alu 1 189 -123 456 240 60 0 chr20 33571878 33571978 -33096027 + MLT1G LTR MaLR 25 130 -460 717 251 39 29 chr20 33571983 33572190 -33095815 + MIR SINE MIR 44 252 -10 207 0 0 0 chr20 33572199 33572222 -33095783 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2457 218 46 0 chr20 33572225 33572680 -33095325 + MLT1G LTR MaLR 115 590 0 228 308 31 0 chr20 33572914 33572979 -33095026 + MER113 DNA MER1_type? 455 521 0 1781 199 98 7 chr20 33573175 33573582 -33094423 - LTR40c LTR ERVL -5 460 17 465 214 51 129 chr20 33573891 33574232 -33093773 - MLT1H LTR MaLR -25 384 80 225 0 0 0 chr20 33574926 33574951 -33093054 + (TG)n Simple_repeat Simple_repeat 2 26 0 1031 230 50 74 chr20 33575149 33575553 -33092452 - MLT1K LTR MaLR 0 588 195 2220 91 10 0 chr20 33575800 33576098 -33091907 + AluSq SINE Alu 1 301 -12 1157 271 68 18 chr20 33576111 33576494 -33091511 - LTR16C LTR ERVL 0 491 90 868 142 7 0 chr20 33576880 33577021 -33090984 + FRAM SINE Alu 33 174 -2 380 262 8 66 chr20 33577077 33577199 -33090806 + L2 LINE L2 3199 3313 0 886 229 29 45 chr20 33578057 33578302 -33089703 + MER102a DNA MER1_type 88 328 -2 266 248 88 58 chr20 33578302 33578439 -33089566 - MIR3 SINE MIR -62 146 6 356 206 113 0 chr20 33578531 33578628 -33089377 + MIR SINE MIR 62 169 -93 698 216 182 67 chr20 33578689 33579074 -33088931 - MLT1H1 LTR MaLR -11 544 91 2763 168 8 31 chr20 33579074 33579457 -33088548 + MER66A LTR ERV1 1 372 -106 2016 117 14 0 chr20 33579457 33579748 -33088257 + AluSc SINE Alu 1 295 -14 2763 168 8 31 chr20 33579748 33579853 -33088152 + MER66A LTR ERV1 372 478 0 698 216 182 67 chr20 33579853 33579952 -33088053 - MLT1H1 LTR MaLR -464 91 5 427 216 10 31 chr20 33580200 33580297 -33087708 - MLT1K LTR MaLR -386 202 108 959 230 84 9 chr20 33580311 33580537 -33087468 - MIR SINE MIR 0 262 20 1680 163 3 10 chr20 33580588 33580882 -33087123 + AluJb SINE Alu 1 292 -20 1873 153 3 13 chr20 33581043 33581356 -33086649 + AluJo SINE Alu 1 310 -2 188 33 0 33 chr20 33582442 33582472 -33085533 + (TTCC)n Simple_repeat Simple_repeat 4 32 0 500 262 121 0 chr20 33582651 33582792 -33085213 - MIR SINE MIR -13 249 92 284 270 6 129 chr20 33582985 33583163 -33084842 + MIR3 SINE MIR 29 184 -24 505 214 159 8 chr20 33583447 33583573 -33084432 + MLT1H1 LTR MaLR 404 548 -7 580 214 60 0 chr20 33583659 33583776 -33084229 + Charlie8 DNA MER1_type 37 160 -2257 1686 145 14 14 chr20 33583917 33584206 -33083799 - AluJo SINE Alu -22 290 2 2091 118 0 3 chr20 33584263 33584569 -33083436 - AluSx SINE Alu -7 305 1 276 323 20 10 chr20 33584796 33584895 -33083110 + MLT1K LTR MaLR 149 248 -340 448 197 23 53 chr20 33585104 33585236 -33082769 + LTR67 LTR ERVL 428 555 -2 1653 103 0 4 chr20 33585317 33585551 -33082454 + AluSx SINE Alu 56 288 -24 208 235 0 20 chr20 33585610 33585661 -33082344 - L2 LINE L2 -245 3068 3019 201 222 0 0 chr20 33587071 33587107 -33080898 + (CGG)n Simple_repeat Simple_repeat 2 37 0 433 217 210 13 chr20 33587936 33588093 -33079912 - MIR SINE MIR -10 252 65 379 301 35 85 chr20 33588777 33588976 -33079029 - MIR3 SINE MIR -18 190 2 294 153 255 20 chr20 33589368 33589466 -33078539 + MIR SINE MIR 93 212 -50 752 263 50 38 chr20 33589478 33589718 -33078287 - MIR SINE MIR 0 262 20 1627 116 86 0 chr20 33589729 33589996 -33078009 - L1MB3 LINE L1 -7 6176 5887 1961 117 3 3 chr20 33590224 33590515 -33077490 - AluSx SINE Alu -21 291 1 208 208 62 0 chr20 33591087 33591135 -33076870 - L3 LINE CR1 -9 1568 1518 279 273 28 142 chr20 33591269 33591522 -33076483 - L2 LINE L2 -114 3158 2935 257 267 40 13 chr20 33591552 33591627 -33076378 - MIR SINE MIR -98 164 88 237 265 150 66 chr20 33591760 33591945 -33076060 - L2 LINE L2 -584 2730 2562 2123 110 23 10 chr20 33591945 33592253 -33075752 + AluSq SINE Alu 2 313 0 237 265 150 66 chr20 33592253 33592414 -33075591 - L2 LINE L2 -752 2562 2355 183 310 169 0 chr20 33592735 33592806 -33075199 - L2 LINE L2 -49 3223 3141 310 200 133 0 chr20 33592962 33593037 -33074968 + MIR3 SINE MIR 118 202 -6 261 250 0 18 chr20 33593972 33594028 -33073977 + MIR3 SINE MIR 111 165 -43 2239 80 0 3 chr20 33594867 33595166 -33072839 - AluY SINE Alu -13 298 1 277 283 8 67 chr20 33596305 33596425 -33071580 + MIR SINE MIR 80 192 -70 329 266 53 59 chr20 33596685 33596734 -33071271 - L1ME LINE L1 -537 5625 5577 2702 13 0 0 chr20 33596734 33597038 -33070967 - AluYa5 SINE Alu -7 304 1 329 266 53 59 chr20 33597038 33597157 -33070848 - L1ME LINE L1 -585 5577 5458 1966 126 3 3 chr20 33598328 33598621 -33069384 + AluSc SINE Alu 1 293 -16 452 253 97 0 chr20 33598719 33598873 -33069132 - MIR SINE MIR 0 262 94 1763 109 36 4 chr20 33598876 33599151 -33068854 - L1MC1 LINE L1 -354 5979 5696 1594 224 69 24 chr20 33599217 33599652 -33068353 - L1MC5 LINE L1 -18 7943 7474 1860 177 35 23 chr20 33599652 33599996 -33068009 + MER7A DNA MER2_type 1 346 0 1594 224 69 24 chr20 33599996 33600139 -33067866 - L1MC5 LINE L1 -487 7474 7339 405 301 166 18 chr20 33600152 33600315 -33067690 - MIR SINE MIR -75 187 1 220 304 0 18 chr20 33600315 33600349 -33067656 + MIR SINE MIR 88 120 -88 2154 71 0 7 chr20 33600356 33600638 -33067367 + AluSc SINE Alu 18 297 -12 2311 82 3 3 chr20 33600638 33600941 -33067064 + AluSq SINE Alu 1 304 -9 314 247 0 27 chr20 33601683 33601756 -33066249 + Charlie8 DNA MER1_type 1 71 -2346 1465 197 10 14 chr20 33601762 33602056 -33065949 - AluJo SINE Alu -19 293 1 1980 109 7 0 chr20 33602301 33602631 -33065374 - AluSg SINE Alu 0 336 5 1436 162 4 32 chr20 33603358 33603636 -33064369 - AluJo SINE Alu -42 270 1 224 277 170 53 chr20 33603836 33603930 -33064075 - MIR3 SINE MIR -14 194 90 388 255 206 0 chr20 33604021 33604123 -33063882 + L2 LINE L2 3150 3272 0 433 252 40 46 chr20 33604398 33604549 -33063456 - Charlie8 DNA MER1_type -2231 186 37 235 229 62 0 chr20 33604793 33604841 -33063164 - MIR3 SINE MIR -49 159 109 2253 116 0 0 chr20 33604883 33605194 -33062811 + AluSx SINE Alu 1 311 -1 1771 146 14 7 chr20 33606001 33606295 -33061710 + MER47A DNA MER2_type 1 296 -70 948 170 17 100 chr20 33606295 33606536 -33061469 + AluJb SINE Alu 85 305 -7 461 189 0 0 chr20 33606540 33606614 -33061391 + MER47A DNA MER2_type 293 366 0 306 291 29 29 chr20 33606642 33606745 -33061260 + L2 LINE L2 2968 3070 -202 30 0 0 0 chr20 33607771 33607801 -33060204 + AT_rich Low_complexity Low_complexity 1 30 0 217 321 88 15 chr20 33608099 33608236 -33059769 - L2 LINE L2 -193 3079 2933 238 309 9 18 chr20 33608350 33608460 -33059545 + CT-rich Low_complexity Low_complexity 4 112 0 180 0 0 0 chr20 33608945 33608965 -33059040 + (CA)n Simple_repeat Simple_repeat 1 20 0 281 311 22 11 chr20 33609593 33609683 -33058322 + MER5B DNA MER1_type 87 177 -1 239 287 111 19 chr20 33609734 33609842 -33058163 + MIR3 SINE MIR 89 206 -2 227 133 0 167 chr20 33610366 33610426 -33057579 - MIR SINE MIR -78 130 81 318 336 178 24 chr20 33610895 33611193 -33056812 - L2 LINE L2 -6 3266 2923 2053 109 0 13 chr20 33612140 33612442 -33055563 + AluSx SINE Alu 1 298 -14 317 195 49 138 chr20 33612670 33612793 -33055212 - L2 LINE L2 -19 3253 3142 2582 17 0 0 chr20 33612879 33613169 -33054836 + AluYa5 SINE Alu 1 290 -21 907 185 143 5 chr20 33613688 33613877 -33054128 + MER58A DNA MER1_type 6 220 -4 2195 100 0 22 chr20 33614043 33614362 -33053643 - AluSx SINE Alu 0 312 1 2113 171 36 13 chr20 33614372 33614758 -33053247 - MSTD LTR MaLR -1 395 1 272 192 39 0 chr20 33614791 33614843 -33053162 + MIR SINE MIR 55 108 -154 56 55 0 0 chr20 33614934 33615025 -33052980 + AT_rich Low_complexity Low_complexity 1 91 0 801 114 8 45 chr20 33615025 33615157 -33052848 - FLAM_C SINE Alu -6 127 1 685 187 8 15 chr20 33615160 33615328 -33052677 - FLAM_C SINE Alu 0 167 1 297 352 0 9 chr20 33615780 33615888 -33052117 + MIR3 SINE MIR 15 121 -87 306 244 78 43 chr20 33616240 33616355 -33051650 - MIR SINE MIR -35 227 109 181 286 41 0 chr20 33616473 33616522 -33051483 - MIR SINE MIR -113 95 45 799 57 0 29 chr20 33617019 33617124 -33050881 + AluSq/x SINE Alu 2 103 -210 324 252 87 31 chr20 33617125 33617252 -33050753 + MIR3 SINE MIR 10 143 -65 1829 129 17 17 chr20 33618409 33618703 -33049302 - AluSx SINE Alu -18 294 1 25 0 0 0 chr20 33618780 33618805 -33049200 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr20 33618999 33619021 -33048984 + (T)n Simple_repeat Simple_repeat 1 22 0 1869 40 0 32 chr20 33619474 33619767 -33048238 - AluY SINE Alu 0 327 43 202 284 12 25 chr20 33619799 33619880 -33048125 + CT-rich Low_complexity Low_complexity 1 80 0 581 191 64 87 chr20 33620313 33620486 -33047519 + MIR SINE MIR 19 187 -75 218 194 0 0 chr20 33621000 33621036 -33046969 - MIR SINE MIR -115 147 112 2055 122 20 0 chr20 33621109 33621404 -33046601 + AluSx SINE Alu 1 301 -11 2220 47 0 7 chr20 33621559 33621834 -33046171 + AluY SINE Alu 38 310 -1 1625 149 4 4 chr20 33622291 33622559 -33045446 + AluSx SINE Alu 37 304 -8 407 19 0 19 chr20 33622559 33622612 -33045393 + (GGGA)n Simple_repeat Simple_repeat 2 53 0 963 229 70 9 chr20 33623275 33623489 -33044516 + MIR SINE MIR 5 231 -31 206 320 107 16 chr20 33623537 33623659 -33044346 - MIR3 SINE MIR -29 179 47 444 229 41 41 chr20 33623688 33623810 -33044195 + MIR SINE MIR 21 142 -66 713 292 62 15 chr20 33623850 33624110 -33043895 + L2 LINE L2 2854 3125 -188 342 280 77 42 chr20 33624119 33624155 -33043850 + L2 LINE L2 3077 3110 -203 2004 89 3 53 chr20 33624155 33624459 -33043546 - AluSq SINE Alu -23 290 2 342 280 77 42 chr20 33624459 33624565 -33043440 + L2 LINE L2 3110 3224 -89 2231 79 3 3 chr20 33625070 33625362 -33042643 - AluSp SINE Alu -21 292 1 740 143 7 71 chr20 33625618 33625758 -33042247 - FLAM_A SINE Alu 0 133 3 451 286 16 16 chr20 33625766 33625892 -33042113 - MIR SINE MIR -117 145 20 2029 168 62 29 chr20 33626443 33626861 -33041144 - MSTB1 LTR MaLR 0 432 1 2534 58 0 3 chr20 33627970 33628282 -33039723 + AluY SINE Alu 1 311 0 351 316 168 21 chr20 33628426 33628616 -33039389 - MIR SINE MIR -13 249 32 877 214 244 33 chr20 33628764 33629246 -33038759 - L2 LINE L2 0 3313 2695 507 263 0 34 chr20 33629252 33629370 -33038635 - L1M4 LINE L1 -1989 4157 4044 1903 191 135 19 chr20 33629373 33630121 -33037884 - L1M4 LINE L1 -2155 3991 3069 200 269 101 54 chr20 33630687 33630836 -33037169 + MIR SINE MIR 105 260 -2 378 274 154 0 chr20 33631808 33631925 -33036080 + MIR SINE MIR 45 179 -83 243 269 101 81 chr20 33632025 33632174 -33035831 + MIR3 SINE MIR 35 186 -22 336 275 110 71 chr20 33632421 33632603 -33035402 + MIR3 SINE MIR 7 195 -13 2339 86 0 3 chr20 33632930 33633222 -33034783 + AluSc SINE Alu 1 291 -18 241 182 23 0 chr20 33633274 33633318 -33034687 - MIR SINE MIR -77 131 87 557 307 104 0 chr20 33633738 33633940 -33034065 - MIR SINE MIR -6 256 34 254 180 0 66 chr20 33634813 33634874 -33033131 - MIR3 SINE MIR -1 207 151 1979 131 3 47 chr20 33634922 33635243 -33032762 + AluSx SINE Alu 1 307 -5 340 286 24 0 chr20 33635404 33635488 -33032517 - MIR SINE MIR -55 153 68 403 234 156 81 chr20 33635706 33636077 -33031928 - LTR37B LTR ERV1 -69 399 1 400 325 68 34 chr20 33637031 33637338 -33030667 - L2 LINE L2 -192 3080 2769 1919 111 29 62 chr20 33637427 33637734 -33030271 - AluSp SINE Alu -15 298 2 565 271 319 26 chr20 33637918 33638010 -33029995 - L2 LINE L2 -3 3310 3246 1883 145 20 26 chr20 33638010 33638313 -33029692 - AluJo SINE Alu -10 302 2 565 271 319 26 chr20 33638313 33638624 -33029381 - L2 LINE L2 -67 3246 2788 213 292 21 62 chr20 33638634 33638730 -33029275 - MIR SINE MIR -96 112 21 291 336 129 0 chr20 33638861 33638977 -33029028 - MIR3 SINE MIR -14 194 64 439 328 42 21 chr20 33639355 33639547 -33028458 + MIR SINE MIR 8 203 -59 244 193 0 0 chr20 33639711 33639768 -33028237 + L1MD2 LINE L1 6302 6358 -1 322 279 8 47 chr20 33639807 33639913 -33028092 + MIR3 SINE MIR 14 116 -92 2373 102 3 0 chr20 33639913 33640218 -33027787 - AluSp SINE Alu -7 306 1 322 279 8 47 chr20 33640218 33640240 -33027765 + MIR3 SINE MIR 116 137 -71 367 266 81 53 chr20 33640663 33640894 -33027111 + MIR SINE MIR 1 234 -28 418 285 103 56 chr20 33641479 33641674 -33026331 - MIR3 SINE MIR -30 178 17 2592 47 7 0 chr20 33641674 33641971 -33026034 + AluY SINE Alu 1 299 -12 199 247 99 49 chr20 33642012 33642093 -33025912 - L2 LINE L2 0 3313 3229 209 295 42 42 chr20 33642369 33642464 -33025541 + MIR SINE MIR 21 115 -93 * 246 347 99 16 chr20 33642438 33642559 -33025446 - L2 LINE L2 -6 3266 3136 187 231 138 46 chr20 33642617 33642682 -33025323 + MIR SINE MIR 79 149 -113 431 230 172 35 chr20 33642763 33642937 -33025068 - MIR SINE MIR -46 216 19 293 232 219 52 chr20 33643204 33643359 -33024646 - MIR SINE MIR -65 197 17 389 291 24 61 chr20 33644250 33644415 -33023590 - MIR SINE MIR -56 206 48 * 792 242 25 11 chr20 33644389 33644637 -33023368 + MIR SINE MIR 9 255 -7 2243 82 0 33 chr20 33644698 33645004 -33023001 - AluY SINE Alu -15 296 1 225 179 0 0 chr20 33645147 33645186 -33022819 - MIR3 SINE MIR -9 199 161 220 290 200 10 chr20 33645453 33645553 -33022452 - MIR3 SINE MIR -52 156 38 879 84 0 0 chr20 33646152 33646259 -33021746 - AluSq/x SINE Alu -205 107 1 260 315 17 19 chr20 33646318 33646434 -33021571 - MIR SINE MIR -72 136 63 180 243 14 114 chr20 33646437 33646485 -33021520 + L2 LINE L2 3246 3287 -26 2051 174 3 0 chr20 33646485 33646796 -33021209 - AluJo SINE Alu 0 312 1 180 243 14 114 chr20 33646796 33646817 -33021188 + L2 LINE L2 3286 3308 -5 301 330 43 77 chr20 33647348 33647557 -33020448 - L2 LINE L2 -40 3232 3031 2122 133 33 0 chr20 33647643 33647945 -33020060 + AluSx SINE Alu 1 312 0 926 203 11 22 chr20 33648098 33648280 -33019725 - MIR SINE MIR -65 197 18 322 316 39 52 chr20 33648594 33648749 -33019256 - L2 LINE L2 -8 3264 3112 280 324 70 87 chr20 33649210 33649682 -33018323 + L2 LINE L2 2809 3272 0 659 237 134 78 chr20 33649869 33650395 -33017610 + L1ME4a LINE L1 5481 6038 -83 2673 46 0 0 chr20 33650485 33650788 -33017217 + AluY SINE Alu 1 303 -8 370 250 37 9 chr20 33650971 33651079 -33016926 - MIR SINE MIR -132 130 20 315 218 51 0 chr20 33651772 33651850 -33016155 - MIR SINE MIR -132 130 49 310 300 33 0 chr20 33651928 33652018 -33015987 - L2 LINE L2 -502 2812 2720 534 223 101 7 chr20 33652575 33652723 -33015282 - MIR SINE MIR -60 202 41 1055 134 168 5 chr20 33653355 33653557 -33014448 + MER46A DNA MER2_type 2 236 0 382 237 102 8 chr20 33653567 33653685 -33014320 - MIR SINE MIR -6 256 128 319 130 14 43 chr20 33654596 33654665 -33013340 + MER5C DNA MER1_type 258 324 0 186 268 37 37 chr20 33654717 33654799 -33013206 + MIR SINE MIR 143 224 -38 * 201 275 154 0 chr20 33654763 33654854 -33013151 - MIR SINE MIR -1 261 157 243 261 45 11 chr20 33655021 33655109 -33012896 + MIR SINE MIR 45 135 -73 196 161 179 54 chr20 33655175 33655231 -33012774 + L2 LINE L2 3173 3235 -37 253 225 141 42 chr20 33655240 33655311 -33012694 + L2 LINE L2 3173 3250 -22 186 307 139 30 chr20 33656177 33656278 -33011727 + MIR SINE MIR 58 169 -93 513 296 76 31 chr20 33656455 33656678 -33011327 + MIR SINE MIR 2 234 -28 438 332 75 5 chr20 33657872 33658086 -33009919 - MIR SINE MIR -14 248 20 307 203 27 27 chr20 33658195 33658269 -33009736 + L2 LINE L2 3198 3271 -1 406 325 62 36 chr20 33658342 33658536 -33009469 - MIR SINE MIR -51 211 13 257 221 24 134 chr20 33659180 33659307 -33008698 + MIR SINE MIR 37 149 -59 1886 108 40 0 chr20 33659310 33659561 -33008444 + AluSq SINE Alu 5 265 -48 396 242 11 11 chr20 33659563 33659658 -33008347 - MLT1A1 LTR MaLR -125 240 146 750 158 0 0 chr20 33659659 33659779 -33008226 - FLAM_C SINE Alu -12 131 12 614 184 63 38 chr20 33659789 33659947 -33008058 - MLT1A1 LTR MaLR -200 165 4 311 239 217 29 chr20 33660138 33660276 -33007729 + MIR SINE MIR 51 214 -48 1752 114 121 15 chr20 33660292 33660565 -33007440 - AluSx SINE Alu -10 302 1 228 67 0 0 chr20 33660902 33660932 -33007073 + (T)n Simple_repeat Simple_repeat 1 30 0 270 319 78 17 chr20 33661004 33661120 -33006885 + MIR3 SINE MIR 15 137 -71 840 263 156 17 chr20 33661653 33661954 -33006051 - MER115 DNA AcHobo 0 693 351 192 304 59 20 chr20 33662196 33662298 -33005707 - L3 LINE CR1 -388 1189 1084 27 0 0 0 chr20 33663633 33663660 -33004345 + AT_rich Low_complexity Low_complexity 1 27 0 2337 118 100 10 chr20 33663911 33664300 -33003705 - MSTA LTR MaLR 0 428 5 2252 84 40 3 chr20 33664380 33664677 -33003328 - AluSx SINE Alu -4 308 1 252 278 216 14 chr20 33664828 33664975 -33003030 + MIR SINE MIR 37 214 -48 279 0 0 0 chr20 33666029 33666060 -33001945 + (TG)n Simple_repeat Simple_repeat 1 31 0 213 317 0 0 chr20 33666097 33666157 -33001848 - L2 LINE L2 0 3313 3254 367 324 83 12 chr20 33666992 33667174 -33000831 - MIR3 SINE MIR -12 196 1 594 270 124 11 chr20 33667681 33667866 -33000139 + MIR3 SINE MIR 3 208 0 229 217 0 0 chr20 33668492 33668538 -32999467 - MIR SINE MIR -115 147 102 354 205 0 0 chr20 33670150 33670228 -32997777 + (CGG)n Simple_repeat Simple_repeat 2 79 0 325 280 223 57 chr20 33670649 33670860 -32997145 + L3 LINE CR1 1298 1543 -34 430 282 63 32 chr20 33670896 33671129 -32996876 - MIR SINE MIR -13 249 8 180 276 0 69 chr20 33671277 33671335 -32996670 - L3 LINE CR1 -117 1460 1407 254 297 99 22 chr20 33671925 33672016 -32995989 - L2 LINE L2 -93 3179 3082 312 299 28 83 chr20 33672808 33672952 -32995053 - MIR3 SINE MIR -72 136 1 200 213 21 0 chr20 33672960 33673007 -32994998 + CT-rich Low_complexity Low_complexity 1 48 0 222 348 152 21 chr20 33673643 33673933 -32994072 + L2 LINE L2 2526 2853 -461 195 254 51 17 chr20 33675325 33675384 -32992621 + MIR SINE MIR 89 149 -59 450 286 27 34 chr20 33676042 33676189 -32991816 + MIR3 SINE MIR 15 160 -48 741 241 161 57 chr20 33676213 33676599 -32991406 - MLT1H LTR MaLR -4 545 120 264 339 45 11 chr20 33676650 33676827 -32991178 + MER117 DNA MER1_type 15 197 0 191 368 23 23 chr20 33676913 33677000 -32991005 + MIR SINE MIR 17 103 -105 446 234 113 0 chr20 33677130 33677271 -32990734 - MLT1K LTR MaLR -5 583 427 840 231 6 0 chr20 33677272 33677432 -32990573 + AluJb SINE Alu 134 294 -18 604 208 168 33 chr20 33677616 33678024 -32989981 + MLT1G3 LTR MaLR 93 555 0 2410 53 0 4 chr20 33678092 33678373 -32989632 + AluY SINE Alu 2 281 -30 346 239 157 30 chr20 33678899 33679033 -32988972 + L2 LINE L2 2929 3079 -193 240 35 0 0 chr20 33679078 33679107 -32988898 + (CA)n Simple_repeat Simple_repeat 2 30 0 1331 159 35 22 chr20 33679116 33679343 -32988662 - AluJb SINE Alu -26 286 57 262 235 137 49 chr20 33680002 33680104 -32987901 - L2 LINE L2 -14 3299 3189 193 267 35 47 chr20 33680196 33680282 -32987723 - L2 LINE L2 -1576 1738 1654 2169 117 3 7 chr20 33680291 33680590 -32987415 + AluSx SINE Alu 1 298 -14 1789 109 8 23 chr20 33680651 33680908 -32987097 - AluSg SINE Alu -17 293 41 1794 157 3 17 chr20 33683851 33684150 -32983855 - AluJb SINE Alu -17 295 1 22 0 0 0 chr20 33684152 33684174 -32983831 + AT_rich Low_complexity Low_complexity 1 22 0 236 165 0 139 chr20 33684453 33684532 -32983473 + L1MB8 LINE L1 6044 6111 -67 2295 93 0 10 chr20 33684533 33684833 -32983172 + AluSx SINE Alu 1 297 -15 30 0 0 0 chr20 33684846 33684876 -32983129 + AT_rich Low_complexity Low_complexity 1 30 0 237 219 98 12 chr20 33684882 33684964 -32983041 - LTR9 LTR ERV1 -80 532 444 2441 73 10 0 chr20 33685489 33685791 -32982214 + AluY SINE Alu 2 306 -5 449 265 103 15 chr20 33685979 33686179 -32981826 + MIR SINE MIR 45 262 0 1733 160 11 14 chr20 33686995 33687277 -32980728 - AluJo SINE Alu -17 295 15 251 203 0 17 chr20 33687705 33687764 -32980241 + L1ME4a LINE L1 5719 5776 -345 262 270 129 33 chr20 33687964 33688410 -32979595 + L1ME4a LINE L1 5483 6016 -105 2191 90 10 13 chr20 33688410 33688710 -32979295 - AluSg SINE Alu -10 300 2 262 270 129 33 chr20 33688710 33688827 -32979178 + L1ME4a LINE L1 6016 6120 -1 343 228 140 9 chr20 33688853 33688967 -32979038 + L1ME4a LINE L1 5993 6121 0 1170 159 0 59 chr20 33689358 33689578 -32978427 + AluJo SINE Alu 89 295 -17 27 0 0 0 chr20 33691033 33691060 -32976945 + AT_rich Low_complexity Low_complexity 1 27 0 2401 77 3 3 chr20 33691063 33691362 -32976643 + AluSp SINE Alu 1 299 -14 836 141 0 47 chr20 33691778 33691927 -32976078 - FLAM_C SINE Alu -1 142 1 2077 117 45 0 chr20 33692187 33692478 -32975527 + AluSq SINE Alu 1 304 -9 1718 204 91 104 chr20 33692605 33693128 -32974877 - MER21B LTR ERV1 -69 794 281 2177 119 0 0 chr20 33693128 33693414 -32974591 - AluSx SINE Alu -26 286 1 1718 204 91 104 chr20 33693414 33693573 -32974432 - MER21B LTR ERV1 -582 281 121 475 203 80 58 chr20 33693616 33693754 -32974251 - MER21B LTR ERV1 -710 153 13 2014 99 33 0 chr20 33694262 33694559 -32973446 + AluSx SINE Alu 1 306 0 2403 105 0 0 chr20 33694769 33695074 -32972931 - AluSx SINE Alu -7 305 1 2264 90 0 17 chr20 33696807 33697108 -32970897 - AluSc SINE Alu -13 296 1 195 42 0 0 chr20 33698597 33698621 -32969384 + (TTC)n Simple_repeat Simple_repeat 2 25 0 241 264 55 22 chr20 33698923 33699014 -32968991 - MIR3 SINE MIR -8 200 107 1715 179 17 3 chr20 33699018 33699319 -32968686 - AluJo SINE Alu -7 305 1 1703 181 10 10 chr20 33699524 33699828 -32968177 - AluJb SINE Alu -8 304 1 2344 85 10 0 chr20 33699999 33700293 -32967712 + AluY SINE Alu 1 297 -14 471 262 169 31 chr20 33700437 33700662 -32967343 + MIR SINE MIR 6 261 -1 834 184 114 6 chr20 33702036 33702194 -32965811 - FAM SINE Alu 0 175 1 1504 163 7 18 chr20 33702517 33702794 -32965211 + AluJo SINE Alu 39 312 0 1990 107 43 23 chr20 33702922 33703221 -32964784 + AluSg SINE Alu 1 305 -5 321 229 209 0 chr20 33703489 33703594 -32964411 + MIR3 SINE MIR 29 155 -53 373 250 81 16 chr20 33704036 33704160 -32963845 + MIR SINE MIR 61 192 -70 1006 187 129 4 chr20 33706021 33706246 -32961759 - MER90 LTR ERV1 -6 608 356 1212 96 34 17 chr20 33706246 33706424 -32961581 - AluSg/x SINE Alu -3 309 129 2212 121 3 0 chr20 33706445 33706752 -32961253 + AluSx SINE Alu 1 308 -4 231 114 0 0 chr20 33706754 33706789 -32961216 + (GGAA)n Simple_repeat Simple_repeat 4 38 0 189 0 0 0 chr20 33706822 33706843 -32961162 + (A)n Simple_repeat Simple_repeat 1 21 0 594 150 0 30 chr20 33706843 33706943 -32961062 - AluSg/x SINE Alu -91 221 125 2262 85 0 0 chr20 33706960 33707243 -32960762 + AluSc SINE Alu 1 283 -26 2355 66 3 33 chr20 33707262 33707565 -32960440 + AluSg SINE Alu 1 294 -16 2335 74 7 0 chr20 33707593 33707906 -32960099 - AluSp SINE Alu 0 315 1 924 202 32 18 chr20 33707908 33708126 -32959879 - MER90 LTR ERV1 -349 226 6 293 263 75 81 chr20 33708270 33708430 -32959575 - MIR SINE MIR -90 172 14 1240 131 13 85 chr20 33708511 33708747 -32959258 - MER20 DNA MER1_type 0 219 1 830 136 40 0 chr20 33708966 33709091 -32958914 + FLAM_C SINE Alu 1 130 -3 21 0 0 0 chr20 33709091 33709112 -32958893 + AT_rich Low_complexity Low_complexity 1 21 0 2343 80 0 10 chr20 33709229 33709529 -32958476 - AluY SINE Alu -14 297 1 180 0 0 0 chr20 33709962 33709982 -32958023 + (CA)n Simple_repeat Simple_repeat 2 21 0 294 292 0 14 chr20 33710187 33710259 -32957746 - MIR3 SINE MIR -125 83 13 632 258 65 18 chr20 33710427 33710644 -32957361 + L2 LINE L2 2393 2619 -695 356 201 74 116 chr20 33710656 33710845 -32957160 + L2 LINE L2 3119 3299 -14 2377 90 0 0 chr20 33710847 33711147 -32956858 + AluSx SINE Alu 1 300 -12 339 244 84 17 chr20 33711670 33711789 -32956216 + L2 LINE L2 3187 3313 0 971 130 0 0 chr20 33711968 33712099 -32955906 + FLAM_C SINE Alu 1 131 -12 371 328 90 20 chr20 33712392 33712593 -32955412 + L2 LINE L2 2843 3057 -215 1719 141 34 41 chr20 33712952 33713243 -32954762 - AluJo SINE Alu -11 301 13 346 183 0 28 chr20 33713373 33713435 -32954570 + L2 LINE L2 3201 3262 -10 1830 145 6 44 chr20 33713435 33713752 -32954253 + AluJo SINE Alu 1 305 -7 3655 155 45 60 chr20 33713830 33714096 -32953909 + L1MB2 LINE L1 5428 5696 -475 2335 103 0 6 chr20 33714096 33714407 -32953598 + AluSq SINE Alu 1 309 -4 3655 155 45 60 chr20 33714407 33714895 -32953110 + L1MB2 LINE L1 5696 6171 0 694 291 53 8 chr20 33716470 33716717 -32951288 - MIR SINE MIR -3 259 2 252 307 84 39 chr20 33716792 33716971 -32951034 - MIR SINE MIR -56 206 20 2197 119 3 13 chr20 33717020 33717332 -32950673 - AluSg SINE Alu -1 309 1 3574 249 107 60 chr20 33717401 33718436 -32949569 + HAL1 LINE L1 2 1144 -1363 1504 191 0 56 chr20 33718436 33718583 -32949422 + AluJo SINE Alu 1 124 -188 2325 90 0 0 chr20 33718583 33718917 -32949088 + AluY SINE Alu 1 334 0 1504 191 0 56 chr20 33718917 33719091 -32948914 + AluJo SINE Alu 124 306 -6 3574 249 107 60 chr20 33719091 33719704 -32948301 + HAL1 LINE L1 1144 1727 -780 1814 143 96 3 chr20 33719700 33720043 -32947962 + L1 LINE L1 4623 4997 -1149 * 1165 167 9 5 chr20 33720043 33720259 -32947746 + LTR5 LTR ERVK 1 217 -752 2554 69 0 0 chr20 33720270 33720573 -32947432 + AluY SINE Alu 1 303 -8 2382 64 0 0 chr20 33720573 33720853 -32947152 + AluY SINE Alu 17 296 -15 2835 186 28 64 chr20 33720855 33721631 -32946374 + LTR5 LTR ERVK 222 969 0 4256 162 18 21 chr20 33721631 33722176 -32945829 + HERVK LTR ERVK 1 545 -6698 2455 75 0 7 chr20 33722176 33722481 -32945524 + AluY SINE Alu 1 303 -8 4256 162 18 21 chr20 33722481 33722695 -32945310 + HERVK LTR ERVK 545 758 -6485 3588 131 33 14 chr20 33722765 33723346 -32944659 + HERVK LTR ERVK 733 1324 -5919 * 11998 81 5 0 chr20 33723334 33724882 -32943123 + HERVK LTR ERVK 3635 5189 -2054 195 42 0 0 chr20 33724886 33724910 -32943095 + (TCTCCC)n Simple_repeat Simple_repeat 2 25 0 6330 68 22 13 chr20 33724910 33725768 -32942237 + SVA Other Other 1 866 -520 6317 79 25 45 chr20 33725802 33726807 -32941198 + SVA Other Other 430 1414 0 12618 123 2 1 chr20 33726822 33728692 -32939313 + HERVK LTR ERVK 5533 7242 -1 3935 184 34 50 chr20 33728693 33729678 -32938327 + LTR5 LTR ERVK 1 969 0 6195 121 16 54 chr20 33729678 33730103 -32937902 + L1MA4A LINE L1 4992 5431 -872 1993 106 31 31 chr20 33730103 33730395 -32937610 + AluSq SINE Alu 1 292 -21 6195 121 16 54 chr20 33730395 33730817 -32937188 + L1MA4A LINE L1 5431 5867 -436 1789 164 3 14 chr20 33730817 33731110 -32936895 + AluJo SINE Alu 1 290 -22 6195 121 16 54 chr20 33731110 33731122 -32936883 + L1MA4A LINE L1 5867 5878 -425 2567 40 3 7 chr20 33731122 33731419 -32936586 + AluY SINE Alu 5 300 -11 6195 121 16 54 chr20 33731419 33731442 -32936563 + L1MA4A LINE L1 5878 5900 -403 2106 113 7 3 chr20 33731442 33731749 -32936256 + AluJb SINE Alu 1 308 0 6195 121 16 54 chr20 33731749 33732224 -32935781 + L1MA4A LINE L1 5900 6302 -1 730 229 103 60 chr20 33732225 33732526 -32935479 + HAL1 LINE L1 1775 2088 -419 636 198 56 0 chr20 33732526 33732652 -32935353 + FLAM_A SINE Alu 1 133 0 276 149 0 0 chr20 33732656 33732703 -32935302 + (GA)n Simple_repeat Simple_repeat 1 47 0 314 253 7 67 chr20 33732703 33732853 -32935152 + HAL1 LINE L1 2075 2215 -292 899 181 141 40 chr20 33732879 33733049 -32934956 + MSTA LTR MaLR 1 201 -227 2390 96 3 0 chr20 33733049 33733351 -32934654 + AluSg SINE Alu 1 303 -7 899 181 141 40 chr20 33733351 33733407 -32934598 + MSTA LTR MaLR 201 250 -178 4538 235 100 23 chr20 33733414 33733834 -32934171 - L1PBb LINE L1 -3549 3300 2914 2305 105 7 0 chr20 33733834 33734140 -32933865 - AluSq SINE Alu -5 308 1 4538 235 100 23 chr20 33734140 33734431 -32933574 - L1PBb LINE L1 -3935 2914 2647 1503 153 0 32 chr20 33734431 33734679 -32933326 + AluJo SINE Alu 56 295 -17 4538 235 100 23 chr20 33734679 33735507 -32932498 - L1PBb LINE L1 -4202 2647 1590 2083 102 3 56 chr20 33735507 33735811 -32932194 - AluSq SINE Alu -23 290 3 4538 235 100 23 chr20 33735811 33735988 -32932017 - L1PBb LINE L1 -5259 1590 1428 3670 200 37 28 chr20 33736471 33736803 -32931202 - L1PBb LINE L1 -6116 733 406 2456 35 0 17 chr20 33736803 33737092 -32930913 + AluY SINE Alu 22 305 -6 3670 200 37 28 chr20 33737092 33737484 -32930521 - L1PBb LINE L1 -6443 406 2 2098 90 7 28 chr20 33737672 33737842 -32930163 + AluSx SINE Alu 1 164 -148 2084 121 82 62 chr20 33737842 33738281 -32929724 - LTR7 LTR ERV1 -2 448 1 2098 90 7 28 chr20 33738281 33738398 -32929607 + AluSx SINE Alu 164 282 -30 639 264 67 67 chr20 33738560 33738859 -32929146 - MER101B LTR ERV1 -271 299 1 304 274 133 35 chr20 33738936 33739049 -32928956 - LTR49-int LTR ERV1 -1115 7005 6882 851 167 8 0 chr20 33739110 33739242 -32928763 + FLAM_C SINE Alu 1 133 0 1753 150 64 108 chr20 33739346 33739373 -32928632 - LTR49-int LTR ERV1 -1830 4501 4474 1404 186 89 36 chr20 33739373 33739653 -32928352 + AluJb SINE Alu 2 296 -6 1753 150 64 108 chr20 33739653 33740038 -32927967 - LTR49-int LTR ERV1 -1857 4474 4146 2300 81 3 16 chr20 33740038 33740345 -32927660 + AluSg SINE Alu 1 303 -7 1753 150 64 108 chr20 33740345 33740463 -32927542 - LTR49-int LTR ERV1 -2185 4146 4024 295 181 60 84 chr20 33740462 33740545 -32927460 - LTR49-int LTR ERV1 -2680 3918 3838 * 195 42 0 0 chr20 33740545 33740569 -32927436 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2285 74 7 14 chr20 33740572 33740857 -32927148 - AluY SINE Alu -28 283 1 1809 221 53 40 chr20 33740858 33741215 -32926790 - LTR49-int LTR ERV1 -2557 2566 2215 2196 121 7 0 chr20 33741215 33741520 -32926485 - AluSx SINE Alu -5 307 1 1809 221 53 40 chr20 33741520 33741988 -32926017 - LTR49-int LTR ERV1 -2908 2215 1707 24 0 0 0 chr20 33742009 33742033 -32925972 + AT_rich Low_complexity Low_complexity 1 24 0 2468 83 0 13 chr20 33742087 33742401 -32925604 - AluSg SINE Alu 0 310 1 944 286 100 24 chr20 33742404 33742733 -32925272 - L1MEd LINE L1 -5408 711 358 2205 115 0 20 chr20 33742897 33743201 -32924804 - AluSx SINE Alu -14 298 1 243 125 0 0 chr20 33743228 33743268 -32924737 + (GA)n Simple_repeat Simple_repeat 1 40 0 449 260 16 0 chr20 33743279 33743406 -32924599 - L1MEd LINE L1 -5985 134 6 295 203 0 14 chr20 33744158 33744227 -32923778 - L2 LINE L2 -314 2958 2891 1898 159 0 0 chr20 33744375 33744665 -32923340 - AluSx SINE Alu -22 290 1 383 200 72 72 chr20 33744689 33744814 -32923191 - L1ME1 LINE L1 -2 6162 6038 742 72 9 9 chr20 33744879 33744990 -32923015 + (TTCC)n Simple_repeat Simple_repeat 2 112 0 807 205 6 18 chr20 33744994 33745159 -32922846 - AluJo SINE Alu -25 287 124 5325 61 56 129 chr20 33745159 33746050 -32921955 + LTR12 LTR ERV1 1 826 0 14053 103 10 14 chr20 33746098 33748940 -32919065 + HERV9 LTR ERV1 58 2972 -5427 1041 133 7 0 chr20 33748939 33749090 -32918915 + HERV9 LTR ERV1 4756 4907 -3492 * 394 174 33 0 chr20 33749090 33749182 -32918823 + HERV9 LTR ERV1 4865 4959 -3440 2024 97 12 29 chr20 33749184 33749996 -32918009 + HERV17 LTR ERV1 704 1720 -5176 * 4919 88 2 0 chr20 33749991 33750629 -32917376 + HERV17 LTR ERV1 7757 8395 -4 4495 77 113 3 chr20 33750633 33751253 -32916752 + LTR12 LTR ERV1 1 688 0 1115 183 32 137 chr20 33751255 33751529 -32916476 - L1ME1 LINE L1 -126 6040 5739 1210 164 67 103 chr20 33751529 33751642 -32916363 + AluJo SINE Alu 3 118 -194 189 0 0 0 chr20 33751642 33751663 -32916342 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1210 164 67 103 chr20 33751663 33751707 -32916298 + AluJo SINE Alu 118 162 -150 3834 179 33 51 chr20 33751707 33752656 -32915349 + LTR5 LTR ERVK 1 932 -37 1210 164 67 103 chr20 33752656 33752809 -32915196 + AluJo SINE Alu 162 303 -9 1115 183 32 137 chr20 33752809 33752944 -32915061 - L1ME1 LINE L1 -427 5739 5674 409 261 108 62 chr20 33753047 33753223 -32914782 + MLT1K LTR MaLR 142 325 -263 1417 98 0 16 chr20 33753512 33753527 -32914478 + AluSg/x SINE Alu 121 135 -177 2424 99 0 3 chr20 33753527 33753841 -32914164 + AluSq SINE Alu 1 313 0 1417 98 0 16 chr20 33753841 33754018 -32913987 + AluSg/x SINE Alu 135 310 -2 2190 123 28 36 chr20 33754056 33754327 -32913678 - MLT1B LTR MaLR 0 390 121 1684 197 0 3 chr20 33754327 33754622 -32913383 - AluJo SINE Alu -18 294 1 2190 123 28 36 chr20 33754622 33754707 -32913298 - MLT1B LTR MaLR -269 121 37 1641 112 18 0 chr20 33754723 33754946 -32913059 - AluSx SINE Alu -13 297 71 2292 94 7 7 chr20 33754946 33755242 -32912763 - AluSq SINE Alu -16 297 1 528 179 0 0 chr20 33755243 33755327 -32912678 - AluSx SINE Alu -228 85 2 228 146 0 24 chr20 33755328 33755369 -32912636 - MLT1B LTR MaLR -348 42 3 2467 81 0 0 chr20 33755550 33755846 -32912159 - AluSg SINE Alu -14 296 1 874 144 0 0 chr20 33755870 33755988 -32912017 - FLAM_C SINE Alu -18 125 8 1988 150 7 7 chr20 33756007 33756313 -32911692 - AluSx SINE Alu -6 306 1 322 316 47 18 chr20 33756313 33756476 -32911529 - L2 LINE L2 -564 2750 2580 1110 122 28 28 chr20 33756629 33756809 -32911196 - LTR9 LTR ERV1 -432 180 1 364 285 89 0 chr20 33756819 33756977 -32911028 + MIR SINE MIR 21 192 -70 2395 97 0 0 chr20 33756983 33757291 -32910714 + AluSq SINE Alu 4 311 -2 1954 125 76 0 chr20 33757328 33757616 -32910389 - AluJb SINE Alu -2 310 1 213 311 33 0 chr20 33757620 33757710 -32910295 - MIR SINE MIR -70 192 100 213 256 0 44 chr20 33758105 33758195 -32909810 + A-rich Low_complexity Low_complexity 2 87 0 409 308 39 6 chr20 33758442 33758598 -32909407 - L2 LINE L2 -236 3036 2876 189 0 0 0 chr20 33758631 33758652 -32909353 + (A)n Simple_repeat Simple_repeat 1 21 0 1987 153 16 0 chr20 33758866 33759173 -32908832 - AluJb SINE Alu 0 312 1 2294 113 0 0 chr20 33759361 33759662 -32908343 - AluSg SINE Alu -9 301 1 834 211 0 0 chr20 33759971 33760137 -32907868 + FRAM SINE Alu 1 166 -10 1884 117 55 10 chr20 33760156 33760447 -32907558 - AluSx SINE Alu -8 304 1 713 221 13 25 chr20 33760582 33760740 -32907265 - L2 LINE L2 0 3313 3158 2532 53 0 10 chr20 33761004 33761305 -32906700 - AluY SINE Alu -13 298 1 1492 167 65 18 chr20 33761313 33761589 -32906416 - AluJo SINE Alu -23 289 1 2137 112 3 0 chr20 33761615 33761930 -32906075 + AluSp SINE Alu 1 316 0 1822 88 0 13 chr20 33761931 33762169 -32905836 + AluY SINE Alu 57 291 -20 2035 136 7 3 chr20 33762313 33762622 -32905383 - AluSg SINE Alu 0 310 1 2309 80 0 35 chr20 33762622 33762935 -32905070 - AluSc SINE Alu -6 303 1 2315 117 0 0 chr20 33762938 33763247 -32904758 - AluSx SINE Alu -3 309 1 2139 91 3 57 chr20 33764381 33764699 -32903306 - AluSg SINE Alu -9 301 1 1001 133 0 0 chr20 33764704 33764847 -32903158 - FLAM_C SINE Alu 0 143 1 953 183 101 82 chr20 33765423 33765652 -32902353 + MER4C LTR ERV1 1 224 -241 2576 39 0 10 chr20 33765652 33765964 -32902041 + AluY SINE Alu 1 309 -2 953 183 101 82 chr20 33765964 33766269 -32901736 + MER4C LTR ERV1 224 465 0 2368 65 7 3 chr20 33766515 33766805 -32901200 + AluY SINE Alu 1 291 -20 350 250 48 0 chr20 33767339 33767443 -32900562 + L1MEc LINE L1 404 512 -5884 1925 237 39 39 chr20 33767445 33768134 -32899871 + L1MEc LINE L1 766 1454 -4942 207 398 8 8 chr20 33768134 33768262 -32899743 + L2 LINE L2 2564 2691 -623 2307 85 0 26 chr20 33768717 33769024 -32898981 + AluSc SINE Alu 1 299 -10 222 242 8 153 chr20 33769934 33770058 -32897947 + MER5A DNA MER1_type 56 161 -28 690 128 103 17 chr20 33770459 33770576 -32897429 - FLAM_A SINE Alu -6 127 1 181 143 48 24 chr20 33770588 33770630 -32897375 - L2 LINE L2 -3 3310 3268 268 271 0 12 chr20 33770677 33770762 -32897243 - MLT1J LTR MaLR -33 478 395 572 242 114 0 chr20 33770835 33770984 -32897021 - MER69A DNA AcHobo -11 166 1 1350 163 67 8 chr20 33771041 33771281 -32896724 + AluJo SINE Alu 29 282 -30 1895 130 60 11 chr20 33771289 33771574 -32896431 - AluSx SINE Alu -13 299 1 2372 76 0 0 chr20 33771594 33771884 -32896121 - AluY SINE Alu -19 292 3 278 229 50 142 chr20 33771995 33772045 -32895960 - MER83B LTR ERV1 -29 349 296 2456 84 0 0 chr20 33772045 33772355 -32895650 + AluSg SINE Alu 1 310 0 278 229 50 142 chr20 33772355 33772465 -32895540 - MER83B LTR ERV1 -82 296 212 2357 85 0 13 chr20 33772465 33772771 -32895234 - AluSg SINE Alu -7 303 2 278 229 50 142 chr20 33772771 33772827 -32895178 - MER83B LTR ERV1 -166 212 152 764 212 53 18 chr20 33773415 33773585 -32894420 + MER58A DNA MER1_type 1 176 -48 2182 124 3 0 chr20 33773742 33774041 -32893964 + AluSg SINE Alu 1 300 -10 2552 91 51 6 chr20 33774541 33774891 -32893114 - MER51B LTR ERV1 -11 366 1 2133 112 40 16 chr20 33774990 33775293 -32892712 - AluSx SINE Alu -2 310 1 251 121 0 0 chr20 33775308 33775341 -32892664 + L1MC5 LINE L1 6731 6763 -1198 679 177 115 0 chr20 33775346 33775476 -32892529 - MER46A DNA MER2_type -91 145 1 1749 181 3 3 chr20 33775789 33776082 -32891923 - AluJb SINE Alu -15 297 5 221 230 93 108 chr20 33776419 33776558 -32891447 - MIR SINE MIR -30 232 96 298 256 120 0 chr20 33776766 33776883 -32891122 - L2 LINE L2 -6 3307 3177 2219 121 0 0 chr20 33776908 33777214 -32890791 + AluSq SINE Alu 1 306 -7 463 173 0 55 chr20 33777575 33777685 -32890320 + FLAM_A SINE Alu 38 141 -1 2803 13 0 0 chr20 33777940 33778240 -32889765 + AluY SINE Alu 1 300 -11 558 259 141 0 chr20 33778912 33779082 -32888923 - MIR SINE MIR -13 249 56 1677 80 27 27 chr20 33779901 33780155 -32887850 - AluSc SINE Alu 0 310 57 1239 218 78 74 chr20 33781398 33781913 -32886092 - MER113 DNA MER1_type? -3 518 2 265 242 267 8 chr20 33782191 33782311 -32885694 - MIR SINE MIR -74 188 38 2470 77 3 0 chr20 33782342 33782641 -32885364 - AluSp SINE Alu -13 300 1 463 352 48 15 chr20 33783494 33783767 -32884238 + L2 LINE L2 2127 2408 -906 260 109 0 22 chr20 33784773 33784819 -32883186 + (TTCC)n Simple_repeat Simple_repeat 4 48 0 2296 107 7 3 chr20 33784830 33785130 -32882875 - AluSq SINE Alu -12 301 1 2094 111 37 0 chr20 33785133 33785430 -32882575 - AluSp SINE Alu -5 308 1 728 168 148 7 chr20 33785430 33785585 -32882420 - AluJo SINE Alu -18 294 118 231 204 0 0 chr20 33785585 33785634 -32882371 + T-rich Low_complexity Low_complexity 1 49 0 1609 124 36 7 chr20 33785921 33786195 -32881810 - L1MA4 LINE L1 -7 6293 6012 275 284 0 12 chr20 33787960 33788041 -32879964 + CT-rich Low_complexity Low_complexity 3 82 0 184 30 61 0 chr20 33788885 33788918 -32879087 + T-rich Low_complexity Low_complexity 101 135 0 2655 36 20 0 chr20 33789269 33789572 -32878433 - AluY SINE Alu -2 309 1 22 0 0 0 chr20 33790087 33790109 -32877896 + AT_rich Low_complexity Low_complexity 1 22 0 2065 119 42 0 chr20 33790192 33790478 -32877527 + AluSg SINE Alu 1 298 -12 1601 138 24 102 chr20 33791156 33791489 -32876516 - AluYb8 SINE Alu -11 307 1 1877 152 28 0 chr20 33791589 33791878 -32876127 - AluJo SINE Alu -15 297 1 2682 210 69 72 chr20 33791888 33792845 -32875160 - L1ME3A LINE L1 -1 6238 5285 1235 177 4 17 chr20 33792845 33793082 -32874923 - MER96B DNA MER1_type? -181 236 3 237 246 34 68 chr20 33793083 33793201 -32874804 - L1ME3A LINE L1 -927 5288 5175 798 109 0 0 chr20 33794048 33794167 -32873838 + (TTTC)n Simple_repeat Simple_repeat 2 120 0 23 54 0 0 chr20 33795157 33795194 -32872811 + AT_rich Low_complexity Low_complexity 1 37 0 530 202 54 62 chr20 33795280 33795409 -32872596 + MER3 DNA MER1_type 2 129 -80 29 28 0 0 chr20 33795518 33795554 -32872451 + AT_rich Low_complexity Low_complexity 1 36 0 2224 249 68 51 chr20 33795593 33795898 -32872107 - L1ME3A LINE L1 -1147 5068 4770 2509 61 0 0 chr20 33795898 33796194 -32871811 - AluY SINE Alu -2 309 14 2224 249 68 51 chr20 33796194 33796483 -32871522 - L1ME3A LINE L1 -1445 4770 4487 182 37 37 0 chr20 33796483 33796510 -32871495 + (TA)n Simple_repeat Simple_repeat 2 29 0 1909 154 3 0 chr20 33796510 33796796 -32871209 - AluSx SINE Alu -25 287 1 2224 249 68 51 chr20 33796796 33796816 -32871189 - L1ME3A LINE L1 -1728 4487 4469 2256 91 10 13 chr20 33796816 33797123 -32870882 - AluSq SINE Alu -7 306 1 2224 249 68 51 chr20 33797123 33797313 -32870692 - L1ME3A LINE L1 -1746 4469 4284 2265 105 7 7 chr20 33797313 33797618 -32870387 - AluSp SINE Alu -8 305 1 2224 249 68 51 chr20 33797618 33797918 -32870087 - L1ME3A LINE L1 -1931 4284 3941 5769 148 49 45 chr20 33797929 33798160 -32869845 - L1MA4 LINE L1 0 6300 6071 4934 77 50 131 chr20 33798160 33799059 -32868946 - LTR12 LTR ERV1 0 826 1 5769 148 49 45 chr20 33799059 33799089 -32868916 - L1MA4 LINE L1 -229 6071 6043 2098 128 3 13 chr20 33799089 33799395 -32868610 - AluSx SINE Alu -9 303 1 5769 148 49 45 chr20 33799395 33799666 -32868339 - L1MA4 LINE L1 -257 6043 5774 2104 125 30 10 chr20 33799666 33799970 -32868035 - AluSg SINE Alu 0 310 1 5769 148 49 45 chr20 33799970 33800867 -32867138 - L1MA4 LINE L1 -526 5774 4882 2140 78 45 0 chr20 33800867 33801176 -32866829 - AluY SINE Alu 0 321 1 5769 148 49 45 chr20 33801176 33801445 -32866560 - L1MA4 LINE L1 -1418 4882 4615 1849 164 6 13 chr20 33801445 33801756 -32866249 - AluJb SINE Alu -3 309 1 5769 148 49 45 chr20 33801756 33802241 -32865764 - L1MA4 LINE L1 -1685 4615 4120 7103 184 150 34 chr20 33802241 33803814 -32864191 + MER52A LTR ERV1 1 1755 0 713 132 0 0 chr20 33803814 33803920 -32864085 - L1MA4 LINE L1 -2023 4123 4018 539 270 25 15 chr20 33803922 33804122 -32863883 - L1ME3A LINE L1 -2267 3948 3747 1485 144 3 129 chr20 33804122 33804462 -32863543 - AluJo SINE Alu -15 297 1 876 307 89 33 chr20 33804465 33805286 -32862719 - L1ME3A LINE L1 -4465 1931 1065 973 190 106 127 chr20 33805297 33805855 -32862150 - L1MC4 LINE L1 -1 8041 7496 437 196 87 87 chr20 33805878 33806097 -32861908 - L1MC4a LINE L1 -550 7258 7080 1363 206 107 50 chr20 33806106 33806470 -32861535 + MSTD LTR MaLR 12 396 0 583 192 17 17 chr20 33806472 33806592 -32861413 + MSTD-int LTR MaLR 2 121 -1614 1647 245 103 4 chr20 33809475 33810027 -32857978 - L1M4 LINE L1 -925 5221 4615 2167 124 0 0 chr20 33810255 33810562 -32857443 + AluSx SINE Alu 1 307 -5 2410 42 0 7 chr20 33810654 33810962 -32857043 - AluY SINE Alu 0 306 1 2137 72 69 4 chr20 33811786 33812062 -32855943 - AluY SINE Alu -17 294 1 395 344 92 13 chr20 33812365 33812592 -32855413 - MIR SINE MIR 0 262 18 2557 48 0 3 chr20 33812908 33813201 -32854804 + AluY SINE Alu 2 293 -18 2175 118 7 0 chr20 33813414 33813711 -32854294 + AluJb SINE Alu 1 299 -13 181 286 89 0 chr20 33813746 33813802 -32854203 - L2 LINE L2 -197 3075 3015 270 176 0 0 chr20 33814028 33814079 -32853926 + T-rich Low_complexity Low_complexity 1 51 0 2584 65 0 0 chr20 33814196 33814504 -32853501 + AluY SINE Alu 1 308 -3 2099 136 0 7 chr20 33814927 33815241 -32852764 + AluJb SINE Alu 1 312 0 277 293 75 28 chr20 33815611 33815717 -32852288 - MER5A DNA MER1_type -44 145 35 336 24 0 0 chr20 33815725 33815766 -32852239 + (TCTCCC)n Simple_repeat Simple_repeat 1 41 0 7403 62 11 16 chr20 33815766 33817337 -32850668 + SVA Other Other 57 1386 0 2155 107 4 0 chr20 33818135 33818438 -32849567 - AluSg SINE Alu 0 304 1 448 266 114 44 chr20 33818439 33818958 -32849047 - L1M4 LINE L1 -1275 4871 4317 2266 105 3 13 chr20 33818992 33819296 -32848709 - AluSx SINE Alu -11 301 1 4183 200 70 34 chr20 33819351 33819447 -32848558 + L1ME LINE L1 3851 3942 -2204 2214 121 0 13 chr20 33819447 33819753 -32848252 - AluSx SINE Alu -10 302 1 4183 200 70 34 chr20 33819753 33819855 -32848150 + L1ME LINE L1 3942 4039 -2107 861 142 0 8 chr20 33819855 33819989 -32848016 - FLAM_C SINE Alu 0 133 1 4183 200 70 34 chr20 33819989 33820450 -32847555 + L1ME LINE L1 4039 4482 -1664 2445 88 0 0 chr20 33820450 33820746 -32847259 + AluSc SINE Alu 1 296 -13 4183 200 70 34 chr20 33820746 33821231 -32846774 + L1ME LINE L1 4482 5038 -1108 576 111 0 0 chr20 33821232 33821331 -32846674 + (T)n Simple_repeat Simple_repeat 1 99 0 25 0 0 0 chr20 33821340 33821365 -32846640 + AT_rich Low_complexity Low_complexity 1 25 0 6993 53 10 48 chr20 33821680 33822672 -32845333 - SVA Other Other 0 1386 433 2843 86 21 98 chr20 33822779 33824429 -32843576 - SVA Other Other -518 868 393 21 36 0 0 chr20 33824480 33824508 -32843497 + GC_rich Low_complexity Low_complexity 1 28 0 1164 198 95 7 chr20 33824519 33824989 -32843016 + L1ME LINE L1 5030 5531 -635 2017 217 42 13 chr20 33824989 33825441 -32842564 - LTR40c LTR ERVL 0 465 1 1292 210 89 11 chr20 33825443 33825724 -32842281 - HERVL40 LTR ERVL -2 5528 5226 2040 250 25 14 chr20 33825731 33826243 -32841762 - HERVL40 LTR ERVL -570 4960 4443 2495 82 0 0 chr20 33826243 33826546 -32841459 - AluY SINE Alu -8 303 1 577 93 98 0 chr20 33826547 33826706 -32841299 + L1MB7 LINE L1 5845 6181 -3 3003 241 77 33 chr20 33826708 33827536 -32840469 - HERVL40 LTR ERVL -1570 3960 3096 377 195 0 11 chr20 33827560 33827647 -32840358 + CT-rich Low_complexity Low_complexity 4 89 0 236 156 0 0 chr20 33827668 33827700 -32840305 + Tigger3(Golem) DNA MER2_type 33 64 -2965 1522 93 17 51 chr20 33827700 33827936 -32840069 + AluSg/x SINE Alu 82 309 -3 3273 120 40 24 chr20 33827937 33828259 -32839746 + Tigger3(Golem) DNA MER2_type 338 672 -2357 2336 99 0 0 chr20 33828259 33828561 -32839444 + AluSg SINE Alu 1 302 -8 3273 120 40 24 chr20 33828561 33828737 -32839268 + Tigger3(Golem) DNA MER2_type 672 844 -2185 794 203 25 6 chr20 33828737 33828920 -32839085 + FRAM SINE Alu 1 235 -242 1145 72 6 22 chr20 33828920 33829101 -32838904 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 794 203 25 6 chr20 33829101 33829211 -32838794 + FRAM SINE Alu 235 341 0 332 203 16 0 chr20 33829211 33829275 -32838730 + GA-rich Low_complexity Low_complexity 5 69 0 1033 122 52 103 chr20 33829275 33829357 -32838648 + Tigger3(Golem) DNA MER2_type 831 916 -2113 2381 86 0 17 chr20 33829357 33829659 -32838346 + AluSq SINE Alu 1 297 -16 759 152 8 8 chr20 33829669 33829794 -32838211 + FLAM_C SINE Alu 2 126 -7 1033 122 52 103 chr20 33829794 33829913 -32838092 + Tigger3(Golem) DNA MER2_type 925 1032 -1997 4563 185 80 40 chr20 33829916 33831027 -32836978 - L1 LINE L1 -1110 5036 3882 * 5060 129 32 36 chr20 33831012 33831979 -32836026 - L1M4c LINE L1 -4759 1625 663 989 167 42 0 chr20 33831979 33832147 -32835858 - L1M4c LINE L1 -6206 178 4 1883 78 62 0 chr20 33832335 33832578 -32835427 - AluSq SINE Alu -17 296 39 318 250 62 10 chr20 33832722 33832818 -32835187 - MIR SINE MIR -73 135 35 2136 156 46 85 chr20 33833037 33833517 -32834488 - MER65C LTR ERV1 0 461 1 306 24 24 0 chr20 33835292 33835334 -32832671 + (TTTTA)n Simple_repeat Simple_repeat 3 125 0 2227 121 7 0 chr20 33835334 33835632 -32832373 - AluSx SINE Alu -1 341 1 24 32 0 0 chr20 33836845 33836876 -32831129 + AT_rich Low_complexity Low_complexity 1 31 0 2522 35 0 3 chr20 33836883 33837189 -32830816 + AluY SINE Alu 2 306 0 474 299 61 43 chr20 33837594 33837922 -32830083 - L1ME4a LINE L1 -273 5848 5515 2414 100 0 0 chr20 33838153 33838463 -32829542 + AluSg SINE Alu 1 310 0 2286 91 3 10 chr20 33838490 33838787 -32829218 - AluSg SINE Alu -14 296 2 190 93 23 23 chr20 33838941 33838984 -32829021 + (TA)n Simple_repeat Simple_repeat 2 44 0 203 269 26 13 chr20 33839315 33839393 -32828612 + CT-rich Low_complexity Low_complexity 2 80 0 1541 127 40 4 chr20 33839629 33839857 -32828148 - AluSx SINE Alu -76 236 1 232 256 26 13 chr20 33839930 33840008 -32827997 + T-rich Low_complexity Low_complexity 3 81 0 1076 164 0 0 chr20 33840080 33840245 -32827760 - AluJb SINE Alu 0 312 148 2369 91 7 0 chr20 33840400 33840696 -32827309 - AluSg SINE Alu -12 298 1 1728 159 47 4 chr20 33840716 33840992 -32827013 - AluJo SINE Alu -20 292 5 2229 102 3 0 chr20 33841023 33841316 -32826689 + AluSx SINE Alu 1 294 -18 240 292 80 15 chr20 33841320 33841457 -32826548 + MARNA DNA Mariner 398 543 -43 275 291 154 60 chr20 33841481 33841620 -32826385 + MARNA DNA Mariner 216 377 -209 1877 167 10 0 chr20 33841620 33841919 -32826086 + AluJo SINE Alu 1 302 -10 275 291 154 60 chr20 33841919 33841961 -32826044 + MARNA DNA Mariner 377 414 -172 498 265 6 77 chr20 33841967 33842018 -32825987 - MIR3 SINE MIR -6 202 149 1464 126 0 50 chr20 33842018 33842240 -32825765 + AluSg/x SINE Alu 82 292 -18 498 265 6 77 chr20 33842240 33842358 -32825647 - MIR3 SINE MIR -59 149 45 664 200 80 0 chr20 33842622 33842772 -32825233 + MER45A DNA AcHobo 5 166 -12 727 189 16 0 chr20 33843488 33843615 -32824390 + FLAM_A SINE Alu 1 129 -4 1783 87 5 0 chr20 33843615 33843834 -32824171 + AluSx SINE Alu 1 220 -92 2413 64 0 13 chr20 33844375 33844673 -32823332 - AluY SINE Alu -17 294 1 2001 176 37 3 chr20 33844743 33845096 -32822909 + MLT1A1 LTR MaLR 1 365 0 4150 178 28 64 chr20 33845211 33846209 -32821796 - LTR5 LTR ERVK 0 969 8 2393 74 7 3 chr20 33846209 33846505 -32821500 - AluY SINE Alu -14 297 1 2070 125 10 0 chr20 33846532 33846865 -32821140 - AluSx SINE Alu 0 312 5 196 291 179 60 chr20 33846865 33846982 -32821023 - MIR SINE MIR -124 138 8 2171 117 0 0 chr20 33847150 33847462 -32820543 - AluSx SINE Alu 0 312 1 780 225 36 110 chr20 33847534 33847899 -32820106 + MER46C DNA MER2_type 1 338 0 1223 185 4 66 chr20 33848448 33848555 -32819450 - AluJb SINE Alu -69 243 131 7143 102 20 13 chr20 33848555 33849551 -32818454 + LTR13 LTR ERVK 1 1003 -4 1223 185 4 66 chr20 33849551 33849702 -32818303 - AluJb SINE Alu -181 131 1 927 183 0 30 chr20 33849878 33850047 -32817958 - AluJb SINE Alu -15 297 134 290 47 47 0 chr20 33850126 33850169 -32817836 + (TTTC)n Simple_repeat Simple_repeat 4 48 0 1968 116 39 29 chr20 33850173 33850483 -32817522 - AluSq SINE Alu 0 313 1 34 42 0 0 chr20 33850625 33850673 -32817332 + AT_rich Low_complexity Low_complexity 1 48 0 2368 123 0 0 chr20 33850961 33851271 -32816734 + AluSx SINE Alu 1 310 -2 698 168 87 0 chr20 33851362 33851511 -32816494 - MER58C DNA MER1_type -2 213 52 286 23 23 23 chr20 33851774 33851818 -32816187 + (TA)n Simple_repeat Simple_repeat 2 45 0 317 191 44 67 chr20 33851823 33852000 -32816005 + L1MC4 LINE L1 1948 6983 -1339 1538 168 18 36 chr20 33852054 33852334 -32815671 + AluJb SINE Alu 35 309 -3 1930 111 0 11 chr20 33852374 33852644 -32815361 + AluSx SINE Alu 45 311 -1 1447 141 0 19 chr20 33852649 33852862 -32815143 + AluSq SINE Alu 87 295 -18 220 348 6 6 chr20 33853220 33853320 -32814685 + CT-rich Low_complexity Low_complexity 1 100 0 405 198 10 21 chr20 33853834 33853930 -32814075 - MER103 DNA DNA -71 95 1 566 321 12 0 chr20 33854116 33854281 -32813724 - MIR SINE MIR -93 169 3 1883 128 7 49 chr20 33854315 33854462 -32813543 + AluJo SINE Alu 1 130 -182 2016 148 0 0 chr20 33854462 33854752 -32813253 + AluJb SINE Alu 12 301 -11 1883 128 7 49 chr20 33854752 33854909 -32813096 + AluJo SINE Alu 130 292 -20 2387 119 0 0 chr20 33854930 33855240 -32812765 + AluSx SINE Alu 1 310 -2 639 266 75 9 chr20 33855283 33855497 -32812508 - MIR SINE MIR -7 255 28 319 191 101 0 chr20 33856282 33856371 -32811634 + MER113 DNA MER1_type? 3 100 -421 2371 80 19 16 chr20 33856382 33856694 -32811311 + AluSq SINE Alu 1 313 0 3524 164 43 18 chr20 33856696 33856761 -32811244 + Tigger2 DNA MER2_type 1 63 -2655 2238 110 0 10 chr20 33856761 33857070 -32810935 - AluSq SINE Alu -7 306 1 3524 164 43 18 chr20 33857070 33857730 -32810275 + Tigger2 DNA MER2_type 63 744 -1974 1212 112 24 80 chr20 33857850 33857889 -32810116 + Tigger2 DNA MER2_type 2483 2523 -195 1833 187 3 0 chr20 33857889 33858194 -32809811 - AluJb SINE Alu -6 306 1 1212 112 24 80 chr20 33858194 33858340 -32809665 + Tigger2 DNA MER2_type 2523 2653 -65 2070 153 0 3 chr20 33858340 33858634 -32809371 + AluJb SINE Alu 1 293 -19 1212 112 24 80 chr20 33858634 33858697 -32809308 + Tigger2 DNA MER2_type 2653 2718 0 1037 184 100 102 chr20 33858697 33858767 -32809238 + MER113 DNA MER1_type? 147 216 -305 2283 109 7 0 chr20 33858767 33859061 -32808944 + AluSx SINE Alu 1 296 -16 1037 184 100 102 chr20 33859061 33859171 -32808834 + MER113 DNA MER1_type? 216 325 -196 2401 74 10 10 chr20 33859171 33859481 -32808524 + AluY SINE Alu 1 310 -1 2204 113 0 0 chr20 33859490 33859797 -32808208 + AluSx SINE Alu 1 307 0 1037 184 100 102 chr20 33859797 33859980 -32808025 + MER113 DNA MER1_type? 333 521 0 237 320 51 0 chr20 33860098 33860176 -32807829 + MIR3 SINE MIR 82 163 -45 572 239 150 49 chr20 33860212 33860438 -32807567 - L2 LINE L2 -50 3263 3015 359 201 7 0 chr20 33860468 33860549 -32807456 + AluS SINE Alu 1 60 -243 180 0 0 0 chr20 33860559 33860579 -32807426 + (A)n Simple_repeat Simple_repeat 1 20 0 751 198 95 21 chr20 33860579 33860628 -32807377 - Charlie5 DNA MER1_type -11 2613 2569 2252 97 10 7 chr20 33860628 33860928 -32807077 - AluSp SINE Alu -10 303 3 751 198 95 21 chr20 33860928 33861120 -32806885 - Charlie5 DNA MER1_type -55 2569 2354 790 133 50 50 chr20 33861128 33861308 -32806697 - Charlie5 DNA MER1_type -2424 188 9 1850 131 9 58 chr20 33861535 33861863 -32806142 + AluJb SINE Alu 1 312 0 186 102 20 41 chr20 33862735 33862762 -32805243 + (GAAA)n Simple_repeat Simple_repeat 1 28 -20 2427 76 6 10 chr20 33862762 33863076 -32804929 + AluSp SINE Alu 1 313 0 186 102 20 41 chr20 33863076 33863097 -32804908 + (GAAA)n Simple_repeat Simple_repeat 28 48 0 1487 146 0 62 chr20 33863098 33863372 -32804633 + AluJo SINE Alu 47 303 -9 472 274 106 0 chr20 33863738 33863851 -32804154 - L2 LINE L2 0 3272 3148 938 144 0 0 chr20 33863925 33864057 -32803948 - FLAM_C SINE Alu -1 132 1 1531 146 130 0 chr20 33864067 33864337 -32803668 - AluSx SINE Alu 0 306 5 2248 113 3 3 chr20 33864665 33864965 -32803040 - AluSx SINE Alu -12 300 1 247 191 32 16 chr20 33865018 33865081 -32802924 - LTR67 LTR ERVL -3 554 491 3428 170 48 27 chr20 33865344 33865704 -32802301 - MER21B LTR ERV1 -1 862 511 1853 141 74 0 chr20 33865704 33865988 -32802017 + AluJo SINE Alu 1 305 -7 3428 170 48 27 chr20 33865988 33866321 -32801684 - MER21B LTR ERV1 -352 511 155 269 172 31 16 chr20 33866402 33866466 -32801539 + LTR67 LTR ERVL 490 554 -3 420 186 0 0 chr20 33866559 33866629 -32801376 - AluS SINE Alu -247 71 2 195 161 0 0 chr20 33867309 33867340 -32800665 - L2 LINE L2 -18 3295 3265 326 336 72 24 chr20 33867383 33867508 -32800497 - MIR SINE MIR -125 137 7 1935 127 7 25 chr20 33867768 33868051 -32799954 + AluJo SINE Alu 5 282 -30 297 262 206 0 chr20 33868058 33868165 -32799840 + MIR3 SINE MIR 37 165 -43 2512 72 3 0 chr20 33868226 33868531 -32799474 - AluSx SINE Alu -6 306 1 512 275 73 32 chr20 33868613 33868770 -32799235 - MLT1K LTR MaLR -31 557 385 1921 147 6 44 chr20 33868770 33869090 -32798915 - AluSx SINE Alu -4 308 1 512 275 73 32 chr20 33869090 33869179 -32798826 - MLT1K LTR MaLR -203 385 301 221 257 197 79 chr20 33869269 33869421 -32798584 - MER5A DNA MER1_type -6 183 14 355 238 157 29 chr20 33870320 33870492 -32797513 + MIR3 SINE MIR 14 207 -1 2475 54 41 0 chr20 33870585 33870879 -32797126 + AluY SINE Alu 1 306 -5 2486 95 0 3 chr20 33871926 33872232 -32795773 + AluSx SINE Alu 1 305 -7 2282 74 7 29 chr20 33872232 33872541 -32795464 + AluY SINE Alu 1 302 -9 1780 102 140 19 chr20 33872941 33873205 -32794800 + AluSx SINE Alu 1 296 -16 2045 103 3 67 chr20 33874775 33875087 -32792918 - AluSx SINE Alu -19 293 2 1305 163 41 13 chr20 33875137 33875634 -32792371 + MLT1F1 LTR MaLR 11 542 0 587 234 14 35 chr20 33875663 33875804 -32792201 - MIR3 SINE MIR -35 173 36 197 305 42 63 chr20 33876021 33876211 -32791794 - MIR SINE MIR -46 216 31 266 299 168 22 chr20 33876341 33876478 -32791527 + MIR SINE MIR 30 186 -76 2277 96 3 7 chr20 33877268 33877561 -32790444 - AluSx SINE Alu -20 292 1 1859 140 0 8 chr20 33877682 33877946 -32790059 + AluSx SINE Alu 45 306 -6 338 254 61 18 chr20 33877946 33878060 -32789945 + Charlie8 DNA MER1_type 73 191 -2226 560 238 94 19 chr20 33878158 33878318 -32789687 - MIR SINE MIR -77 185 14 189 238 119 12 chr20 33878317 33878401 -32789604 + MIR SINE MIR 60 152 -110 * 2390 82 0 19 chr20 33878917 33879232 -32788773 + AluY SINE Alu 1 309 -2 669 291 62 5 chr20 33879350 33879560 -32788445 - MIR SINE MIR -31 231 10 248 152 288 80 chr20 33879606 33879650 -32788355 + MER5B DNA MER1_type 23 57 -121 2471 71 3 7 chr20 33879650 33879959 -32788046 + AluSp SINE Alu 1 308 -5 248 152 288 80 chr20 33879959 33880039 -32787966 + MER5B DNA MER1_type 57 173 -5 2406 98 0 3 chr20 33880486 33880791 -32787214 - AluSx SINE Alu -8 304 1 1711 160 59 14 chr20 33881499 33881786 -32786219 + AluJo SINE Alu 1 300 -12 252 306 52 0 chr20 33881794 33881928 -32786077 - L1ME LINE L1 -439 5682 5542 2350 89 0 37 chr20 33882091 33882270 -32785735 - AluSx SINE Alu 0 312 128 2317 109 0 3 chr20 33882270 33882572 -32785433 - AluSg SINE Alu -9 301 1 2389 95 0 7 chr20 33882572 33882877 -32785128 - AluSq SINE Alu -10 303 1 2350 89 0 37 chr20 33882877 33883020 -32784985 - AluSx SINE Alu -182 130 1 266 276 50 55 chr20 33883072 33883253 -32784752 + L2 LINE L2 2565 2744 -570 306 279 121 45 chr20 33884685 33885275 -32782730 + L2 LINE L2 2356 3029 -284 777 162 28 7 chr20 33885742 33885884 -32782121 + MIR SINE MIR 13 157 -105 298 350 32 0 chr20 33886157 33886280 -32781725 - MIR SINE MIR -6 256 130 551 136 0 0 chr20 33886497 33886585 -32781420 + AluSg/x SINE Alu 218 305 -5 1288 266 94 46 chr20 33887422 33888005 -32780000 - L2 LINE L2 -582 2732 2122 301 274 29 0 chr20 33888098 33888200 -32779805 + MLT1K LTR MaLR 151 255 -333 388 287 77 46 chr20 33888968 33889163 -32778842 + L2 LINE L2 547 747 -2567 338 311 133 37 chr20 33890046 33890381 -32777624 + L2 LINE L2 770 1072 -2242 207 0 0 0 chr20 33890381 33890404 -32777601 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 2114 107 0 21 chr20 33890404 33890695 -32777310 - AluSg SINE Alu -25 285 1 338 311 133 37 chr20 33890695 33890957 -32777048 + L2 LINE L2 1071 1520 -1794 2440 88 0 0 chr20 33890960 33891255 -32776750 + AluSx SINE Alu 5 299 -13 7441 71 4 24 chr20 33891269 33892297 -32775708 + LTR13 LTR ERVK 1 1007 0 1437 246 166 51 chr20 33892355 33893001 -32775004 + L2 LINE L2 1867 2668 -646 2249 112 7 3 chr20 33893001 33893306 -32774699 + AluSx SINE Alu 1 306 -6 1437 246 166 51 chr20 33893306 33893654 -32774351 + L2 LINE L2 2668 2975 -339 234 186 0 0 chr20 33893655 33893698 -32774307 + L2 LINE L2 3251 3293 -20 220 261 257 22 chr20 33893775 33893997 -32774008 - L2 LINE L2 -527 2787 2514 221 280 93 37 chr20 33894186 33894293 -32773712 - MIR3 SINE MIR -48 160 48 226 229 0 0 chr20 33894585 33894633 -32773372 + MIR SINE MIR 106 153 -109 215 260 208 0 chr20 33894821 33894898 -32773107 + MIR SINE MIR 58 150 -112 2218 131 0 0 chr20 33895094 33895400 -32772605 - AluSx SINE Alu -6 306 1 384 262 205 19 chr20 33895494 33895704 -32772301 + MIR SINE MIR 10 258 -4 21 36 0 0 chr20 33896100 33896128 -32771877 + GC_rich Low_complexity Low_complexity 1 28 0 303 185 23 0 chr20 33896722 33896801 -32771204 + MIR SINE MIR 100 181 -63 2010 118 3 20 chr20 33896811 33897115 -32770890 + AluJo SINE Alu 1 299 -13 239 261 84 8 chr20 33897234 33897353 -32770652 - L1ME3A LINE L1 -209 5961 5834 972 171 29 29 chr20 33897376 33897586 -32770419 + MER2 DNA MER2_type 1 210 -135 1211 99 19 0 chr20 33897625 33897786 -32770219 - AluSg/x SINE Alu -15 297 134 2419 83 3 0 chr20 33897786 33898087 -32769918 - AluSp SINE Alu -11 302 1 998 244 99 78 chr20 33898097 33898134 -32769871 + Charlie7 DNA MER1_type 98 133 -2479 2339 67 3 32 chr20 33898134 33898449 -32769556 + AluY SINE Alu 1 306 -5 998 244 99 78 chr20 33898449 33898900 -32769105 + Charlie7 DNA MER1_type 133 602 -2010 2222 123 10 0 chr20 33898900 33899208 -32768797 + AluSx SINE Alu 1 311 -1 998 244 99 78 chr20 33899208 33899293 -32768712 + Charlie7 DNA MER1_type 602 684 -1928 2200 126 0 3 chr20 33899467 33899768 -32768237 - AluSx SINE Alu -12 300 1 2450 153 22 40 chr20 33899772 33900207 -32767798 + L1MD1 LINE L1 5748 6189 -53 1499 144 121 12 chr20 33900207 33900463 -32767542 - AluSx SINE Alu -2 310 27 2320 110 10 0 chr20 33900463 33900771 -32767234 - AluSp SINE Alu 0 313 1 2450 153 22 40 chr20 33900771 33900832 -32767173 + L1MD1 LINE L1 6187 6236 -6 2602 127 11 5 chr20 33900898 33901347 -32766658 - L1PA13 LINE L1 -5 6158 5707 2096 139 3 0 chr20 33901368 33901662 -32766343 + AluSx SINE Alu 1 295 -17 2368 97 0 0 chr20 33901755 33902053 -32765952 - AluSx SINE Alu -14 298 1 2387 115 0 0 chr20 33902055 33902359 -32765646 - AluSx SINE Alu -8 304 1 375 235 87 0 chr20 33902359 33902474 -32765531 - L1M4 LINE L1 -3620 2526 2402 500 205 55 47 chr20 33902487 33902614 -32765391 + FLAM_A SINE Alu 1 128 -5 1939 106 73 4 chr20 33902617 33902892 -32765113 + AluSq SINE Alu 1 294 -19 528 130 9 19 chr20 33902953 33903061 -32764944 + (GGAA)n Simple_repeat Simple_repeat 2 108 0 329 145 0 16 chr20 33903077 33903139 -32764866 - L1MDa LINE L1 -5884 656 596 2318 88 0 24 chr20 33903161 33903458 -32764547 - AluSg SINE Alu -20 290 1 893 252 170 38 chr20 33903481 33903846 -32764159 + L1MC4a LINE L1 5453 5865 -1943 306 70 18 105 chr20 33903882 33903939 -32764066 + Alu SINE Alu 238 289 -13 2170 103 21 0 chr20 33903943 33904260 -32763745 + AluSx SINE Alu 1 323 0 342 293 61 18 chr20 33904261 33904425 -32763580 + L1MC4a LINE L1 5862 6032 -1776 343 260 91 32 chr20 33905197 33905351 -32762654 + L2 LINE L2 3151 3313 0 1639 177 10 30 chr20 33906176 33906476 -32761529 - AluJo SINE Alu -7 305 12 337 200 328 0 chr20 33906617 33906742 -32761263 - MIR SINE MIR -90 172 7 230 197 99 14 chr20 33906799 33906870 -32761135 - L2 LINE L2 -50 3263 3187 350 300 6 22 chr20 33906887 33906991 -32761014 + (CATA)n Simple_repeat Simple_repeat 2 103 -75 2046 108 7 14 chr20 33906991 33907278 -32760727 + AluSx SINE Alu 1 285 -27 350 300 6 22 chr20 33907278 33907353 -32760652 + (CATA)n Simple_repeat Simple_repeat 103 178 0 916 129 0 0 chr20 33907419 33907543 -32760462 - FLAM_C SINE Alu -19 124 1 188 324 28 91 chr20 33907711 33907887 -32760118 - L2 LINE L2 -85 3187 3023 2274 118 0 0 chr20 33907986 33908291 -32759714 + AluSx SINE Alu 1 305 -7 362 314 58 35 chr20 33908291 33908457 -32759548 + Charlie8 DNA MER1_type 102 271 -2146 1628 209 57 39 chr20 33908845 33909304 -32758701 + MLT1C LTR MaLR 1 467 0 1133 217 118 69 chr20 33910348 33910400 -32757605 - MLT1G1 LTR MaLR -5 590 542 2028 114 44 0 chr20 33910400 33910703 -32757302 - AluSg1 SINE Alu 0 315 1 1133 217 118 69 chr20 33910703 33911114 -32756891 - MLT1G1 LTR MaLR -53 542 102 2395 159 18 25 chr20 33911117 33911186 -32756819 - MSTB1 LTR MaLR 0 432 364 1872 216 35 69 chr20 33911186 33911820 -32756185 - LTR9 LTR ERV1 0 612 1 2395 159 18 25 chr20 33911820 33912185 -32755820 - MSTB1 LTR MaLR -68 364 1 1398 211 34 34 chr20 33912238 33912536 -32755469 + AluJb SINE Alu 1 298 -14 2162 107 0 43 chr20 33912540 33912676 -32755329 + AluSx SINE Alu 10 150 -162 2493 74 0 0 chr20 33912676 33912973 -32755032 + AluY SINE Alu 1 297 -14 2162 107 0 43 chr20 33912973 33913135 -32754870 + AluSx SINE Alu 150 295 -17 1917 122 75 162 chr20 33913137 33913784 -32754221 - MER4A LTR ERV1 0 465 1 290 193 53 0 chr20 33913784 33913841 -32754164 - MLT1G1 LTR MaLR -535 60 1 436 300 200 0 chr20 33913846 33914006 -32753999 + MIR SINE MIR 19 210 -52 3629 93 16 40 chr20 33914301 33914402 -32753603 + MER41A LTR ERV1 1 103 -451 2267 102 3 10 chr20 33914402 33914707 -32753298 - AluSq SINE Alu -3 310 8 3629 93 16 40 chr20 33914707 33915173 -32752832 + MER41A LTR ERV1 103 554 0 1523 154 60 11 chr20 33915720 33916005 -32752000 + MER57A LTR ERV1 3 301 -102 3474 129 43 12 chr20 33916016 33916498 -32751507 + MER41B LTR ERV1 13 519 -116 2211 115 3 6 chr20 33916498 33916810 -32751195 - AluY SINE Alu 0 311 1 3474 129 43 12 chr20 33916810 33916931 -32751074 + MER41B LTR ERV1 519 635 0 485 139 158 0 chr20 33916931 33917032 -32750973 + MER57A LTR ERV1 287 403 0 229 234 255 11 chr20 33917032 33917126 -32750879 - L2 LINE L2 -32 3281 3165 193 232 21 0 chr20 33917187 33917282 -32750723 + (TA)n Simple_repeat Simple_repeat 1 97 0 1903 156 7 3 chr20 33917291 33917580 -32750425 + AluJo SINE Alu 10 299 -13 540 309 150 3 chr20 33917591 33917898 -32750107 - L2 LINE L2 -150 3163 2812 252 214 27 143 chr20 33917958 33918070 -32749935 + L1M LINE L1 5274 5372 -790 1106 179 14 5 chr20 33918161 33918368 -32749637 + AluJb SINE Alu 104 312 0 2321 120 0 0 chr20 33918377 33918686 -32749319 - AluSx SINE Alu -3 309 1 225 302 0 0 chr20 33918864 33918927 -32749078 + L2 LINE L2 755 817 -2497 725 283 52 28 chr20 33918939 33919229 -32748776 - MLT1L LTR MaLR -6 609 313 2500 78 7 0 chr20 33919289 33919597 -32748408 + AluY SINE Alu 1 310 -1 2431 98 3 0 chr20 33919679 33919985 -32748020 + AluSx SINE Alu 1 307 -5 291 231 0 0 chr20 33920023 33920075 -32747930 - MLT1J LTR MaLR -103 408 357 816 148 7 14 chr20 33920084 33920226 -32747779 + AluJ SINE Alu 2 142 -170 1937 149 0 49 chr20 33920226 33920373 -32747632 + AluSx SINE Alu 1 127 -185 6902 47 8 3 chr20 33920373 33921843 -32746162 + L1PA6 LINE L1 4674 6148 -6 1937 149 0 49 chr20 33921843 33922003 -32746002 + AluSx SINE Alu 127 293 -19 811 166 22 7 chr20 33922464 33922603 -32745402 + AluJ SINE Alu 120 260 -52 243 298 163 0 chr20 33922803 33922944 -32745061 - MIR SINE MIR -2 260 97 1528 163 80 28 chr20 33922969 33923258 -32744747 + AluJo SINE Alu 1 304 -8 670 95 0 0 chr20 33923371 33923476 -32744529 - AluSg/x SINE Alu -1 309 205 712 209 66 25 chr20 33923544 33923732 -32744273 + MER21B LTR ERV1 101 299 -564 2512 85 0 0 chr20 33923732 33924037 -32743968 - AluSg SINE Alu -5 305 1 2243 119 0 0 chr20 33924107 33924401 -32743604 + AluSx SINE Alu 1 294 -18 620 212 0 36 chr20 33924441 33924578 -32743427 + FLAM_C SINE Alu 2 133 0 1734 167 3 36 chr20 33924585 33924891 -32743114 + AluJb SINE Alu 1 296 -16 21 0 0 0 chr20 33924891 33924912 -32743093 + AT_rich Low_complexity Low_complexity 1 21 0 2247 185 53 16 chr20 33925062 33925635 -32742370 + LTR27 LTR ERV1 2 661 -141 1670 186 21 39 chr20 33925616 33925954 -32742051 + LTR28 LTR ERV1 689 1020 0 * 1844 149 9 44 chr20 33926012 33926328 -32741677 + AluJb SINE Alu 1 305 -7 582 258 71 16 chr20 33926371 33926553 -32741452 + MIR SINE MIR 63 254 -8 2312 85 7 0 chr20 33926620 33926924 -32741081 + AluSp SINE Alu 2 307 0 479 206 100 0 chr20 33927325 33927369 -32740636 - MER104 DNA MER2_type -1721 177 139 2263 88 3 26 chr20 33927369 33927675 -32740330 - AluSg SINE Alu -11 299 1 479 206 100 0 chr20 33927675 33927790 -32740215 - MER104 DNA MER2_type -1759 139 2 469 281 38 19 chr20 33928285 33928445 -32739560 - MIR3 SINE MIR -4 204 42 2372 103 3 0 chr20 33928540 33928842 -32739163 + AluSx SINE Alu 1 303 -9 274 250 0 0 chr20 33929020 33929084 -32738921 + MIR SINE MIR 43 106 -156 1610 214 27 86 chr20 33929089 33929200 -32738805 + MLT1F LTR MaLR 2 118 -424 1530 166 59 45 chr20 33929200 33929490 -32738515 + AluJo SINE Alu 1 294 -18 2413 101 0 0 chr20 33929491 33929798 -32738207 + AluSg SINE Alu 1 307 -3 1610 214 27 86 chr20 33929798 33930205 -32737800 + MLT1F LTR MaLR 117 542 0 274 298 92 46 chr20 33930211 33930304 -32737701 + MIR SINE MIR 113 215 -47 2266 132 0 0 chr20 33930304 33930614 -32737391 + AluJb SINE Alu 1 310 -2 274 298 92 46 chr20 33930614 33930651 -32737354 + MIR SINE MIR 215 249 -13 345 303 40 53 chr20 33931071 33931093 -32736912 + MIR SINE MIR 51 72 -190 1705 167 30 20 chr20 33931093 33931392 -32736613 + AluSx SINE Alu 1 302 -10 345 303 40 53 chr20 33931392 33931521 -32736484 + MIR SINE MIR 72 200 -62 2271 120 0 0 chr20 33931693 33931992 -32736013 - AluSx SINE Alu -13 299 1 2152 131 0 13 chr20 33932005 33932319 -32735686 - AluSx SINE Alu -1 311 2 2525 73 3 0 chr20 33932343 33932644 -32735361 - AluSp SINE Alu -11 302 1 625 172 0 16 chr20 33932760 33932776 -32735229 - FRAM SINE Alu -136 40 25 2365 80 30 0 chr20 33932776 33933078 -32734927 - AluY SINE Alu 0 311 1 625 172 0 16 chr20 33933078 33933183 -32734822 - FRAM SINE Alu -151 25 1 439 117 0 13 chr20 33933183 33933255 -32734750 + Alu SINE Alu 238 308 -3 679 254 50 23 chr20 33933271 33933491 -32734514 + LTR67 LTR ERVL 332 557 0 27 49 0 0 chr20 33933526 33933567 -32734438 + AT_rich Low_complexity Low_complexity 1 41 0 609 238 38 108 chr20 33933734 33933853 -32734152 - L1ME3 LINE L1 -1 6161 6035 2170 134 0 3 chr20 33933853 33934158 -32733847 + AluSq SINE Alu 2 305 -8 609 238 38 108 chr20 33934158 33934265 -32733740 - L1ME3 LINE L1 -127 6035 5922 2159 120 6 25 chr20 33934265 33934581 -32733424 - AluSx SINE Alu -2 310 1 609 238 38 108 chr20 33934581 33934616 -32733389 - L1ME3 LINE L1 -240 5922 5886 1693 165 3 44 chr20 33934616 33934932 -32733073 + AluJo SINE Alu 1 303 -9 609 238 38 108 chr20 33934932 33935038 -32732967 - L1ME3 LINE L1 -276 5886 5818 2262 102 0 28 chr20 33935040 33935362 -32732643 - AluSq SINE Alu 0 313 1 2120 110 0 0 chr20 33935392 33935710 -32732295 - AluSx SINE Alu 0 328 11 1766 140 19 48 chr20 33935715 33936029 -32731976 - AluJo SINE Alu -7 305 1 2408 66 0 47 chr20 33936030 33936347 -32731658 - AluY SINE Alu -9 302 1 1932 144 0 0 chr20 33936400 33936699 -32731306 - AluSg SINE Alu -11 299 1 395 210 0 0 chr20 33936699 33936780 -32731225 - AluJo/FLAM SINE Alu -170 132 52 1714 159 17 23 chr20 33936805 33937106 -32730899 + MER61C LTR ERV1 136 434 0 265 245 0 0 chr20 33937106 33937155 -32730850 - AluSp SINE Alu -116 187 139 482 279 76 5 chr20 33937164 33937361 -32730644 - L1MC4a LINE L1 -1979 5829 5619 300 53 0 0 chr20 33937375 33937413 -32730592 + (TTTTC)n Simple_repeat Simple_repeat 3 40 0 1823 160 0 3 chr20 33937453 33937753 -32730252 - AluJo SINE Alu -13 299 1 1856 90 21 14 chr20 33937776 33938087 -32729918 - AluSg SINE Alu 0 313 1 416 170 20 20 chr20 33938093 33938193 -32729812 - L1MB7 LINE L1 -11 6173 6074 2484 201 90 73 chr20 33938199 33938758 -32729247 - MER21B LTR ERV1 -2 861 286 1913 143 0 3 chr20 33938758 33939051 -32728954 + AluSx SINE Alu 1 292 -20 2484 201 90 73 chr20 33939051 33939214 -32728791 - MER21B LTR ERV1 -577 286 127 1872 109 0 61 chr20 33939246 33939557 -32728448 + AluSc SINE Alu 2 293 -16 2120 109 0 3 chr20 33939690 33939983 -32728022 - AluSg SINE Alu -18 292 1 896 134 8 0 chr20 33940052 33940186 -32727819 + AluSq/x SINE Alu 1 135 -178 2074 113 7 0 chr20 33940186 33940478 -32727527 + AluSg SINE Alu 2 295 -15 2111 84 14 0 chr20 33940480 33940766 -32727239 + AluSg SINE Alu 1 290 -20 704 138 22 14 chr20 33940965 33941103 -32726902 - L1M4 LINE L1 -960 5186 5048 1682 180 3 0 chr20 33941104 33941399 -32726606 - AluJo SINE Alu -16 296 1 315 228 98 82 chr20 33941406 33941590 -32726415 - L1MC4a LINE L1 -513 5608 5422 414 192 176 62 chr20 33941724 33941808 -32726197 + L1MC5 LINE L1 7724 7797 -164 1976 116 14 0 chr20 33941808 33942101 -32725904 - AluSx SINE Alu -15 297 1 684 208 0 8 chr20 33942101 33942226 -32725779 - AluJo/FLAM SINE Alu -178 124 1 414 192 176 62 chr20 33942226 33942333 -32725672 + L1MC5 LINE L1 7796 7938 -23 857 133 7 22 chr20 33942336 33942471 -32725534 + FLAM_C SINE Alu 1 133 0 2141 111 0 3 chr20 33942477 33942774 -32725231 - AluSq SINE Alu -16 297 2 365 333 57 0 chr20 33942863 33942986 -32725019 + MIR SINE MIR 12 141 -121 2073 229 72 39 chr20 33942999 33943584 -32724421 - LTR31 LTR ERV1 -15 604 1 2530 58 0 0 chr20 33943607 33943918 -32724087 - AluY SINE Alu 0 311 1 2112 114 3 0 chr20 33944268 33944558 -32723447 - AluSg SINE Alu -17 293 3 2146 117 16 0 chr20 33944563 33944870 -32723135 - AluSx SINE Alu 0 312 1 446 305 112 16 chr20 33944989 33945176 -32722829 + MIR SINE MIR 47 251 -11 2210 88 3 0 chr20 33945313 33945607 -32722398 + AluSp SINE Alu 3 297 -16 228 250 200 0 chr20 33945703 33945783 -32722222 - MIR SINE MIR -62 146 51 2111 118 0 0 chr20 33945935 33946231 -32721774 - AluSx SINE Alu -16 296 1 791 193 116 34 chr20 33946231 33946438 -32721567 - AluJo SINE Alu -2 310 87 409 250 9 0 chr20 33946479 33946591 -32721414 - L1MC4 LINE L1 -4 8038 7926 1917 138 0 0 chr20 33946648 33946937 -32721068 - AluSx SINE Alu -23 289 1 848 201 0 33 chr20 33946939 33947099 -32720906 - AluJb SINE Alu -16 296 141 1961 93 93 0 chr20 33947099 33947378 -32720627 - AluSg SINE Alu -5 305 1 848 201 0 33 chr20 33947378 33947401 -32720604 - AluJb SINE Alu -171 141 119 2082 116 0 7 chr20 33947497 33947799 -32720206 - AluSx SINE Alu -12 300 1 1908 126 0 33 chr20 33947807 33948135 -32719870 - AluSx SINE Alu 0 312 1 1011 145 11 0 chr20 33948229 33948415 -32719590 - MER53 DNA DNA 0 189 2 252 193 169 12 chr20 33949070 33949153 -32718852 - MIR SINE MIR -77 185 90 676 177 45 91 chr20 33949326 33949402 -32718603 + MER5A DNA MER1_type 1 79 -110 2292 77 0 3 chr20 33949402 33949700 -32718305 + AluSq SINE Alu 6 302 -11 676 177 45 91 chr20 33949700 33949821 -32718184 + MER5A DNA MER1_type 79 189 0 2517 61 0 3 chr20 33949845 33950157 -32717848 - AluY SINE Alu 0 311 1 673 202 0 0 chr20 33950212 33950331 -32717674 - FLAM_C SINE Alu -14 119 1 1720 108 138 8 chr20 33950357 33950617 -32717388 + AluSx SINE Alu 1 294 -8 673 154 89 0 chr20 33950627 33950750 -32717255 + FRAM SINE Alu 42 175 -1 959 222 41 33 chr20 33950767 33950863 -32717142 - L1ME3A LINE L1 -4 6166 6072 3925 107 34 54 chr20 33950863 33950967 -32717038 + MER41B LTR ERV1 1 106 -529 1956 109 4 0 chr20 33950967 33951241 -32716764 - AluSg SINE Alu -20 290 16 3925 107 34 54 chr20 33951241 33951641 -32716364 + MER41B LTR ERV1 106 512 -123 2003 130 0 9 chr20 33951641 33951956 -32716049 - AluSx SINE Alu 0 312 1 2160 92 0 35 chr20 33951964 33952281 -32715724 - AluSg SINE Alu -4 306 1 3925 107 34 54 chr20 33952281 33952309 -32715696 + MER41B LTR ERV1 519 546 -89 2125 119 0 0 chr20 33952309 33952611 -32715394 + AluSq SINE Alu 1 302 -11 3925 107 34 54 chr20 33952611 33952715 -32715290 + MER41B LTR ERV1 546 635 0 959 222 41 33 chr20 33952715 33952861 -32715144 - L1ME3A LINE L1 -98 6072 5922 387 266 109 23 chr20 33952879 33953007 -32714998 + MIR SINE MIR 22 160 -102 2144 96 3 0 chr20 33953013 33953306 -32714699 + AluSg SINE Alu 1 294 -16 675 229 8 0 chr20 33953306 33953428 -32714577 + MER5A DNA MER1_type 67 189 0 243 196 0 39 chr20 33953434 33953485 -32714520 + MER5A DNA MER1_type 103 151 -38 1620 127 11 45 chr20 33953564 33953732 -32714273 - AluSx SINE Alu -16 296 139 2209 83 3 0 chr20 33953732 33954022 -32713983 - AluSg SINE Alu -19 291 1 1620 127 11 45 chr20 33954022 33954121 -32713884 - AluSx SINE Alu -173 139 38 1078 116 0 0 chr20 33954121 33954268 -32713737 - AluSq/x SINE Alu -165 147 1 1327 128 18 5 chr20 33954274 33954492 -32713513 - AluSg/x SINE Alu -8 302 82 1439 90 0 20 chr20 33954498 33954699 -32713306 + AluSg/x SINE Alu 107 303 -7 783 122 0 0 chr20 33954699 33954806 -32713199 - AluSq/x SINE Alu -196 116 10 1338 145 13 4 chr20 33954816 33955050 -32712955 + AluJo SINE Alu 68 303 -9 367 232 351 7 chr20 33955214 33955365 -32712640 + MIR SINE MIR 16 218 -44 223 349 0 0 chr20 33955407 33955473 -32712532 - MIR SINE MIR -167 95 30 1466 135 6 132 chr20 33955541 33955897 -32712108 + AluJo SINE Alu 1 311 -1 800 196 42 53 chr20 33955943 33956132 -32711873 + MER5A DNA MER1_type 1 187 -2 34 0 0 0 chr20 33956813 33956847 -32711158 + GC_rich Low_complexity Low_complexity 1 34 0 2205 63 0 50 chr20 33957694 33958011 -32709994 + AluSg SINE Alu 1 301 -9 1964 125 0 3 chr20 33958021 33958318 -32709687 + AluJb SINE Alu 5 300 -12 1912 118 3 10 chr20 33958518 33958814 -32709191 - AluSg SINE Alu -16 294 1 395 281 144 13 chr20 33958857 33959010 -32708995 - MER5A DNA MER1_type 0 189 17 1212 189 85 11 chr20 33959350 33959620 -32708385 - AluJb SINE Alu -18 294 5 831 160 0 14 chr20 33959684 33959828 -32708177 + FLAM_C SINE Alu 1 142 -1 186 342 38 0 chr20 33959969 33960048 -32707957 - L2 LINE L2 -690 2624 2543 926 128 0 87 chr20 33960290 33960462 -32707543 - AluSg/x SINE Alu -25 287 131 197 319 0 0 chr20 33960554 33960601 -32707404 - L3 LINE CR1 -7 1570 1524 397 249 119 40 chr20 33960603 33960780 -32707225 + MER117 DNA MER1_type 6 196 -1 180 360 105 23 chr20 33960830 33960916 -32707089 - MIR SINE MIR -95 113 21 2179 90 3 10 chr20 33961088 33961389 -32706616 + AluSc SINE Alu 1 299 -10 224 339 0 0 chr20 33961531 33961593 -32706412 + L2 LINE L2 3201 3262 -10 2102 105 3 16 chr20 33962147 33962452 -32705553 + AluSg SINE Alu 1 301 -9 1775 159 7 7 chr20 33962921 33963222 -32704783 + AluJb SINE Alu 1 301 -11 611 292 21 28 chr20 33963222 33963446 -32704559 + MIR SINE MIR 3 219 -17 2028 139 0 13 chr20 33963477 33963786 -32704219 + AluSx SINE Alu 1 305 -7 2517 47 0 0 chr20 33963986 33964286 -32703719 + AluY SINE Alu 1 300 -11 444 91 0 0 chr20 33964306 33964372 -32703633 + L1M2 LINE L1 5602 5667 -645 1928 110 29 26 chr20 33964373 33964683 -32703322 - AluSx SINE Alu -1 311 1 36 53 0 0 chr20 33964751 33964808 -32703197 + AT_rich Low_complexity Low_complexity 1 57 0 426 285 48 30 chr20 33964875 33965040 -32702965 + MIR3 SINE MIR 40 207 -1 2322 56 3 26 chr20 33965124 33965428 -32702577 + AluY SINE Alu 1 297 -14 2258 88 0 0 chr20 33965484 33965779 -32702226 - AluY SINE Alu -16 295 1 1917 145 7 0 chr20 33966075 33966372 -32701633 - AluSq SINE Alu -14 299 1 1957 115 7 0 chr20 33966379 33966657 -32701348 - AluSx SINE Alu -14 298 19 198 294 120 22 chr20 33966664 33966756 -32701249 - L2 LINE L2 -16 3256 3156 1487 110 5 5 chr20 33966981 33967200 -32700805 - AluSc SINE Alu -8 301 83 22 0 0 0 chr20 33967202 33967224 -32700781 + AT_rich Low_complexity Low_complexity 1 22 0 519 307 54 0 chr20 33967392 33967558 -32700447 + MIR SINE MIR 5 179 -83 252 333 44 26 chr20 33967699 33967813 -32700192 - MER102a DNA MER1_type -6 324 209 2242 81 0 23 chr20 33967832 33968139 -32699866 - AluSq SINE Alu -12 301 2 2239 94 3 0 chr20 33968143 33968440 -32699565 - AluSp SINE Alu -15 298 1 21 0 0 0 chr20 33968440 33968461 -32699544 + AT_rich Low_complexity Low_complexity 1 21 0 451 152 0 38 chr20 33968472 33968552 -32699453 + L1MA8 LINE L1 6165 6242 -49 785 154 8 0 chr20 33968552 33968669 -32699336 + FLAM_C SINE Alu 1 118 -15 451 152 0 38 chr20 33968669 33968693 -32699312 + L1MA8 LINE L1 6242 6265 -26 21 0 0 0 chr20 33968728 33968749 -32699256 + AT_rich Low_complexity Low_complexity 1 21 0 315 0 0 0 chr20 33968796 33968831 -32699174 + (T)n Simple_repeat Simple_repeat 1 35 0 749 161 0 0 chr20 33968832 33968944 -32699061 + FLAM_C SINE Alu 3 114 -29 505 262 45 50 chr20 33969028 33969249 -32698756 - MER102a DNA MER1_type -110 220 1 840 127 59 149 chr20 33969328 33969580 -32698425 + AluJb SINE Alu 84 315 0 1885 133 3 3 chr20 33970191 33970485 -32697520 + AluSx SINE Alu 1 294 -18 1837 145 0 23 chr20 33970681 33970985 -32697020 + AluJb SINE Alu 1 297 -15 2115 88 6 25 chr20 33971288 33971606 -32696399 + AluSx SINE Alu 1 312 0 430 204 58 19 chr20 33971965 33972068 -32695937 - U6 snRNA snRNA 0 107 1 267 254 93 25 chr20 33972215 33972333 -32695672 - HAL1 LINE L1 -2364 143 18 1973 139 17 65 chr20 33972411 33972694 -32695311 - L1MB4 LINE L1 -1 6179 5884 2288 76 0 10 chr20 33972694 33972996 -32695009 - AluY SINE Alu -12 299 1 1821 94 91 4 chr20 33973006 33973271 -32694734 - AluSc SINE Alu -21 288 1 1973 139 17 65 chr20 33973271 33973392 -32694613 - L1MB4 LINE L1 -305 5875 5784 680 167 51 5 chr20 33973545 33973709 -32694296 - L1MB4 LINE L1 -827 5319 5175 732 131 22 51 chr20 33973712 33973849 -32694156 - FLAM_C SINE Alu 0 133 1 1912 155 0 0 chr20 33973888 33974184 -32693821 - AluSx SINE Alu -13 299 4 798 127 76 70 chr20 33974220 33974377 -32693628 + AluJo SINE Alu 3 160 -152 855 136 117 7 chr20 33974377 33974531 -32693474 - AluSc SINE Alu -7 302 132 2165 89 0 3 chr20 33974531 33974824 -32693181 - AluSg SINE Alu -17 293 2 810 175 0 13 chr20 33974837 33974991 -32693014 + AluJo SINE Alu 159 310 -2 301 289 19 29 chr20 33975004 33975108 -32692897 - L1MB4 LINE L1 -1004 5142 5040 2086 117 3 7 chr20 33975507 33975807 -32692198 - AluSx SINE Alu -13 299 1 1995 128 0 0 chr20 33975812 33976141 -32691864 - AluSg SINE Alu 0 310 1 1512 176 0 36 chr20 33976142 33976444 -32691561 - AluJo SINE Alu -16 296 6 2271 85 3 0 chr20 33976462 33976756 -32691249 - AluSp SINE Alu -9 304 10 746 167 0 16 chr20 33976792 33976918 -32691087 - AluJb SINE Alu -178 134 11 1993 131 3 10 chr20 33976933 33977245 -32690760 - AluSp SINE Alu -3 310 1 180 0 0 0 chr20 33977247 33977267 -32690738 + (T)n Simple_repeat Simple_repeat 1 20 0 726 41 0 31 chr20 33977268 33977365 -32690640 - HY3 scRNA scRNA -7 94 1 2143 109 0 0 chr20 33977376 33977678 -32690327 - AluSg1 SINE Alu -7 302 1 2305 73 0 7 chr20 33977758 33978061 -32689944 - AluY SINE Alu -10 301 1 1733 145 0 55 chr20 33978120 33978289 -32689716 - AluSx SINE Alu -18 294 148 288 0 0 0 chr20 33978289 33978321 -32689684 + (TG)n Simple_repeat Simple_repeat 1 32 0 1733 145 0 55 chr20 33978321 33978462 -32689543 - AluSx SINE Alu -164 148 1 876 193 43 27 chr20 33979197 33979408 -32688597 - AluSg/x SINE Alu 0 307 94 1990 117 10 10 chr20 33980120 33980419 -32687586 + AluSx SINE Alu 1 299 -13 1479 145 59 35 chr20 33980444 33980734 -32687271 + AluJo SINE Alu 1 297 -15 2094 121 0 3 chr20 33980804 33981102 -32686903 - AluSc SINE Alu -12 297 1 1196 189 0 5 chr20 33981200 33981417 -32686588 - AluJb SINE Alu -15 297 82 195 42 0 0 chr20 33981431 33981455 -32686550 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1022 192 0 10 chr20 33981474 33981682 -32686323 - AluJb SINE Alu -2 310 105 733 245 55 0 chr20 33982093 33982256 -32685749 + MER8 DNA MER2_type 1 172 -67 683 174 0 84 chr20 33982261 33982416 -32685589 - FLAM_C SINE Alu 0 143 2 440 198 0 12 chr20 33982417 33982498 -32685507 + MER8 DNA MER2_type 160 239 0 408 240 110 0 chr20 33982665 33982765 -32685240 - LTR47A LTR ERVL -65 387 277 1853 124 4 0 chr20 33982971 33983238 -32684767 + AluSx SINE Alu 34 301 -11 412 324 89 11 chr20 33983326 33983505 -32684500 - MIR SINE MIR -69 193 1 2183 118 3 0 chr20 33983543 33983849 -32684156 - AluSx SINE Alu -5 307 1 2053 103 31 3 chr20 33983860 33984152 -32683853 - AluSq SINE Alu -13 300 1 323 273 77 55 chr20 33984534 33984717 -32683288 - L1MC4a LINE L1 -1916 5892 5706 21 57 0 0 chr20 33984990 33985025 -32682980 + AT_rich Low_complexity Low_complexity 1 35 0 187 225 25 0 chr20 33985751 33985791 -32682214 + MIR SINE MIR 216 256 -6 603 168 0 0 chr20 33985799 33985906 -32682099 - AluJo/FRAM SINE Alu 0 312 206 468 239 0 58 chr20 33985909 33986047 -32681958 + FLAM_A SINE Alu 4 133 0 683 185 39 56 chr20 33986112 33986290 -32681715 + LTR48B LTR ERV1 467 641 -3 1074 169 11 6 chr20 33986328 33986506 -32681499 + AluJo SINE Alu 1 179 -133 915 298 49 3 chr20 33986506 33986791 -32681214 - L2 LINE L2 -1119 2195 1898 1757 145 78 0 chr20 33987049 33987332 -32680673 + AluSx SINE Alu 1 305 -7 265 196 0 0 chr20 33987352 33987403 -32680602 + L2 LINE L2 3263 3313 0 323 137 0 0 chr20 33987518 33987569 -32680436 - L1MB8 LINE L1 -4 6174 6124 766 195 27 13 chr20 33987600 33987749 -32680256 - AluJo SINE Alu -128 184 34 1911 188 78 59 chr20 33987749 33988049 -32679956 - LTR48B LTR ERV1 -68 576 258 2417 87 0 3 chr20 33988049 33988348 -32679657 + AluSx SINE Alu 1 298 -14 1911 188 78 59 chr20 33988348 33988610 -32679395 - LTR48B LTR ERV1 -386 258 3 3280 157 45 45 chr20 33988611 33989135 -32678870 - L1MB7 LINE L1 -82 6102 5576 2232 110 0 0 chr20 33989135 33989427 -32678578 - AluSx SINE Alu -14 298 7 3280 157 45 45 chr20 33989427 33989572 -32678433 - L1MB7 LINE L1 -607 5577 5433 900 164 6 36 chr20 33989608 33989773 -32678232 - FRAM SINE Alu -17 159 1 574 168 37 3 chr20 33989777 33989899 -32678106 - L1MB7 LINE L1 -746 5438 5316 2285 99 13 0 chr20 33990117 33990420 -32677585 - AluSg1 SINE Alu -2 307 1 1896 163 0 0 chr20 33991167 33991462 -32676543 - AluJo SINE Alu -17 295 1 2327 90 10 0 chr20 33991497 33991797 -32676208 - AluSq SINE Alu -10 303 1 22 56 0 0 chr20 33991809 33991845 -32676160 + AT_rich Low_complexity Low_complexity 1 36 0 2293 103 10 0 chr20 33992210 33992520 -32675485 + AluSp SINE Alu 1 313 0 1913 110 4 4 chr20 33992658 33992912 -32675093 + AluSx SINE Alu 1 254 -58 1068 169 20 88 chr20 33992912 33993041 -32674964 - AluJb SINE Alu -69 243 138 2200 125 0 0 chr20 33993041 33993336 -32674669 - AluSc SINE Alu -14 295 1 1068 169 20 88 chr20 33993336 33993455 -32674550 - AluJb SINE Alu -174 138 12 700 92 20 0 chr20 33993740 33993838 -32674167 - AluSg/x SINE Alu -5 304 205 312 248 0 7 chr20 33993840 33993861 -32674144 - AluJo SINE Alu -167 135 115 1991 145 0 3 chr20 33993861 33994158 -32673847 - AluSx SINE Alu -16 296 1 312 248 0 7 chr20 33994158 33994216 -32673789 - AluJo SINE Alu -187 115 78 309 389 83 10 chr20 33996896 33997263 -32670742 - L2 LINE L2 -286 2986 2596 185 258 42 108 chr20 33997468 33997515 -32670490 + MIR SINE MIR 80 129 -133 2060 131 24 0 chr20 33997515 33997812 -32670193 - AluSq SINE Alu -9 304 1 185 258 42 108 chr20 33997812 33997884 -32670121 + MIR SINE MIR 129 191 -71 1854 160 0 26 chr20 33997951 33998264 -32669741 + AluJb SINE Alu 1 305 -7 2254 111 0 3 chr20 33998322 33998620 -32669385 + AluSq SINE Alu 1 297 -16 826 109 0 17 chr20 33998880 33998999 -32669006 - FLAM_C SINE Alu -2 141 25 1925 134 0 27 chr20 33999124 33999423 -32668582 - AluJb SINE Alu -15 297 7 2582 57 0 0 chr20 33999632 33999933 -32668072 - AluY SINE Alu -10 301 1 2185 100 0 7 chr20 34000379 34000668 -32667337 - AluSx SINE Alu -25 287 1 363 283 97 38 chr20 34000776 34001044 -32666961 + L2 LINE L2 2949 3303 -10 718 210 0 0 chr20 34001065 34001189 -32666816 - FLAM_A SINE Alu -9 124 1 1341 195 43 4 chr20 34001217 34001473 -32666532 - AluJo SINE Alu -46 266 1 233 306 0 6 chr20 34001963 34002067 -32665938 + T-rich Low_complexity Low_complexity 1 156 0 1126 164 0 11 chr20 34002290 34002473 -32665532 - AluJo SINE Alu -10 302 122 496 184 0 88 chr20 34002502 34002616 -32665389 - FLAM_A SINE Alu -15 127 24 307 310 126 16 chr20 34002616 34002871 -32665134 - L1ME4a LINE L1 -210 5911 5629 27 0 0 0 chr20 34002940 34002967 -32665038 + AT_rich Low_complexity Low_complexity 1 27 0 917 213 0 44 chr20 34002983 34003166 -32664839 + FAM SINE Alu 1 175 0 2179 115 6 22 chr20 34003185 34003499 -32664506 + AluSq SINE Alu 1 309 -4 518 238 0 57 chr20 34003661 34003783 -32664222 + FLAM_A SINE Alu 1 115 -18 2033 97 0 8 chr20 34004285 34004553 -32663452 - AluSx SINE Alu -46 266 1 506 272 44 0 chr20 34005122 34005258 -32662747 + MIR SINE MIR 53 194 -68 242 209 122 43 chr20 34005974 34006113 -32661892 - L1ME4a LINE L1 -11 6110 5961 829 253 0 6 chr20 34006126 34006284 -32661721 - FAM SINE Alu -18 157 1 920 178 6 18 chr20 34007100 34007263 -32660742 + AluJb SINE Alu 141 301 -11 2380 87 0 40 chr20 34007557 34007879 -32660126 - AluSp SINE Alu -4 309 1 1860 146 7 7 chr20 34008375 34008669 -32659336 + AluJo SINE Alu 1 294 -18 2135 94 0 0 chr20 34008942 34009217 -32658788 + AluSg SINE Alu 2 276 -34 2412 83 3 0 chr20 34009217 34009516 -32658489 + AluSp SINE Alu 1 301 -12 293 182 0 0 chr20 34009516 34009571 -32658434 - MER44D DNA MER2_type -184 425 371 381 150 83 0 chr20 34009625 34009685 -32658320 - MER44D DNA MER2_type -238 371 37 1342 95 0 0 chr20 34010011 34010180 -32657825 - AluSq SINE Alu -15 298 130 2209 94 3 7 chr20 34010200 34010497 -32657508 - AluSp SINE Alu -17 296 1 2266 100 0 0 chr20 34010500 34010799 -32657206 - AluSq SINE Alu -14 299 1 207 0 0 0 chr20 34010803 34010826 -32657179 + (T)n Simple_repeat Simple_repeat 1 23 0 1821 162 7 0 chr20 34011067 34011364 -32656641 - AluJo SINE Alu -13 299 1 2344 102 3 6 chr20 34011848 34012162 -32655843 - AluSp SINE Alu 0 313 1 1193 128 23 55 chr20 34012585 34012804 -32655201 - AluSg/x SINE Alu -16 296 85 683 105 0 0 chr20 34012804 34012899 -32655106 - AluY SINE Alu -62 249 155 563 312 71 4 chr20 34012900 34013153 -32654852 - L1ME4a LINE L1 -307 5863 5594 2370 192 66 25 chr20 34013190 34013717 -32654288 - L1MB5 LINE L1 -2 6172 5624 528 265 157 7 chr20 34013725 34014019 -32653986 - L1MEd LINE L1 -5221 898 561 988 204 17 0 chr20 34014206 34014378 -32653627 - FAM SINE Alu 0 175 1 234 0 0 0 chr20 34014694 34014720 -32653285 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1472 175 14 40 chr20 34014827 34015124 -32652881 + AluJb SINE Alu 3 291 -21 732 242 128 9 chr20 34015183 34015402 -32652603 - MIR SINE MIR 0 262 18 1432 228 29 39 chr20 34015688 34015899 -32652106 - L1MB7 LINE L1 -9 6175 5968 2258 112 0 0 chr20 34015899 34016194 -32651811 - AluSx SINE Alu -17 295 1 1432 228 29 39 chr20 34016194 34016394 -32651611 - L1MB7 LINE L1 -216 5968 5768 2156 115 3 3 chr20 34016706 34017002 -32651003 - AluSq SINE Alu -17 296 1 4048 183 28 53 chr20 34018098 34019092 -32648913 + LTR5 LTR ERVK 1 969 0 283 204 143 10 chr20 34019422 34019520 -32648485 + L1MC5 LINE L1 7787 7897 -64 2000 142 9 25 chr20 34019533 34019850 -32648155 - AluSx SINE Alu 0 312 1 2071 143 0 0 chr20 34019866 34020173 -32647832 - AluY SINE Alu -4 307 1 1272 154 38 110 chr20 34020403 34020722 -32647283 + AluJb SINE Alu 1 296 -16 753 189 0 40 chr20 34021668 34021816 -32646189 - FLAM_C SINE Alu 0 143 2 2293 110 0 7 chr20 34022031 34022339 -32645666 - AluSx SINE Alu -6 306 1 23 54 0 0 chr20 34022456 34022493 -32645512 + AT_rich Low_complexity Low_complexity 1 37 0 203 162 0 0 chr20 34022519 34022556 -32645449 + MER5B DNA MER1_type 4 40 -138 * 583 184 10 0 chr20 34022552 34022650 -32645355 - MER5A DNA MER1_type -85 104 6 493 273 108 26 chr20 34023180 34023411 -32644594 - MIR SINE MIR -11 251 2 1990 112 3 18 chr20 34023567 34023877 -32644128 - AluSx SINE Alu 0 306 1 232 352 149 25 chr20 34023884 34024230 -32643775 - L2 LINE L2 -576 2738 2436 1774 164 7 10 chr20 34024230 34024529 -32643476 + AluJo SINE Alu 1 298 -14 232 352 149 25 chr20 34024529 34024852 -32643153 - L2 LINE L2 -878 2436 1986 2346 87 0 29 chr20 34024857 34025168 -32642837 + AluSx SINE Alu 1 302 -10 1753 186 0 6 chr20 34025772 34026084 -32641921 + AluSx SINE Alu 1 310 -2 2384 84 0 0 chr20 34026107 34026405 -32641600 + AluSq SINE Alu 1 298 -15 1576 142 91 4 chr20 34026498 34026772 -32641233 + AluJb SINE Alu 1 298 -14 21 0 0 0 chr20 34027025 34027046 -32640959 + AT_rich Low_complexity Low_complexity 1 21 0 1574 179 15 97 chr20 34027093 34027422 -32640583 + AluJb SINE Alu 1 302 0 2132 136 0 16 chr20 34028251 34028568 -32639437 - AluSx SINE Alu 0 312 1 224 385 0 26 chr20 34029398 34029476 -32638529 - MIR SINE MIR -117 91 16 365 314 154 6 chr20 34029725 34029881 -32638124 - MER5A DNA MER1_type -1 188 10 1913 152 0 7 chr20 34029950 34030252 -32637753 + AluSx SINE Alu 8 307 -5 425 151 70 12 chr20 34030252 34030332 -32637673 + L1MA9 LINE L1 6172 6256 -56 1719 181 0 3 chr20 34030407 34030705 -32637300 - AluJb SINE Alu -15 297 1 1685 153 14 14 chr20 34032372 34032666 -32635339 - AluJb SINE Alu -10 302 9 2059 102 25 7 chr20 34033554 34033837 -32634168 - AluSx SINE Alu -10 302 15 2370 87 0 3 chr20 34034087 34034387 -32633618 + AluSq SINE Alu 1 299 -14 1064 179 0 0 chr20 34034511 34034690 -32633315 - AluSg/x SINE Alu 0 310 132 2181 133 0 0 chr20 34034690 34034984 -32633021 - AluSx SINE Alu -18 294 1 905 159 0 0 chr20 34035619 34035751 -32632254 - FLAM_C SINE Alu -1 132 1 2377 73 0 10 chr20 34035790 34036090 -32631915 + AluY SINE Alu 1 297 -14 2183 84 18 0 chr20 34036330 34036614 -32631391 + AluSc SINE Alu 3 291 -18 1530 191 14 4 chr20 34036801 34037078 -32630927 + AluJo SINE Alu 1 280 -32 313 230 79 50 chr20 34037117 34037256 -32630749 + L1MD2 LINE L1 5610 5752 -369 2288 84 3 14 chr20 34037400 34037697 -32630308 + AluSp SINE Alu 1 294 -19 1907 146 3 10 chr20 34037741 34038042 -32629963 - AluSx SINE Alu -13 299 1 627 285 83 13 chr20 34039868 34040096 -32627909 + MIR SINE MIR 13 256 -6 21 0 0 0 chr20 34040270 34040291 -32627714 + AT_rich Low_complexity Low_complexity 1 21 0 452 236 162 40 chr20 34041007 34041206 -32626799 + L1MC5 LINE L1 7477 7650 -311 2350 75 0 16 chr20 34041206 34041512 -32626493 + AluSg SINE Alu 1 301 -9 452 236 162 40 chr20 34041512 34041663 -32626342 + L1MC5 LINE L1 7650 7870 -91 22 35 0 0 chr20 34042190 34042219 -32625786 + AT_rich Low_complexity Low_complexity 1 29 0 26 0 0 0 chr20 34042285 34042311 -32625694 + AT_rich Low_complexity Low_complexity 1 26 0 1069 221 66 101 chr20 34042835 34043410 -32624595 + L1MD2 LINE L1 5804 6358 -1 2224 121 0 7 chr20 34044104 34044409 -32623596 + AluSx SINE Alu 1 303 -9 1021 177 0 0 chr20 34044409 34044573 -32623432 + AluJb SINE Alu 134 297 -15 1794 179 3 10 chr20 34044884 34045191 -32622814 + AluJb SINE Alu 1 305 -7 749 220 38 6 chr20 34045776 34045935 -32622070 - FAM SINE Alu -11 164 1 1702 157 64 4 chr20 34046437 34046718 -32621287 + AluJb SINE Alu 10 307 -5 2089 139 0 16 chr20 34046810 34047126 -32620879 + AluSx SINE Alu 1 311 -1 22 0 0 0 chr20 34047139 34047161 -32620844 + AT_rich Low_complexity Low_complexity 1 22 0 2703 20 0 0 chr20 34047234 34047535 -32620470 - AluY SINE Alu -10 301 1 2295 101 0 3 chr20 34047916 34048223 -32619782 - AluSq SINE Alu -1 312 7 1822 109 36 53 chr20 34048573 34048876 -32619129 - AluSx SINE Alu -14 298 1 296 200 13 0 chr20 34049238 34049313 -32618692 + (TA)n Simple_repeat Simple_repeat 1 76 0 928 135 0 0 chr20 34049313 34049446 -32618559 - AluJb SINE Alu -2 310 178 781 145 0 0 chr20 34049626 34049743 -32618262 + AluJb SINE Alu 178 294 -18 265 173 13 13 chr20 34049743 34049818 -32618187 + (TA)n Simple_repeat Simple_repeat 2 76 0 980 138 0 13 chr20 34049827 34049979 -32618026 - AluJb SINE Alu -161 151 2 344 282 130 23 chr20 34050044 34050175 -32617830 + MIR SINE MIR 47 191 -71 1505 175 46 23 chr20 34050775 34051078 -32616927 + AluJo SINE Alu 3 312 0 21 36 0 0 chr20 34051103 34051131 -32616874 + AT_rich Low_complexity Low_complexity 1 28 0 574 264 40 24 chr20 34051157 34051407 -32616598 + Charlie4 DNA MER1_type 1 254 -1707 566 138 0 0 chr20 34051456 34051543 -32616462 - FLAM_A SINE Alu -34 108 22 1787 191 103 19 chr20 34051609 34052038 -32615967 - MLT1C LTR MaLR -2 465 1 506 249 79 33 chr20 34052097 34052358 -32615647 - MER77 LTR ERV1 -4 601 408 481 221 152 125 chr20 34052403 34052692 -32615313 - MER77 LTR ERV1 -253 352 56 527 155 0 21 chr20 34052768 34052865 -32615140 + AluSg/x SINE Alu 214 308 -1 1262 132 10 29 chr20 34053278 34053508 -32614497 - AluJo SINE Alu 0 309 84 314 294 128 0 chr20 34053660 34053769 -32614236 - MIR SINE MIR -56 206 84 1605 192 3 14 chr20 34053836 34054128 -32613877 + AluJo SINE Alu 1 289 -23 2161 85 26 26 chr20 34054527 34054832 -32613173 + AluSg SINE Alu 1 305 -5 238 308 123 15 chr20 34054940 34055070 -32612935 - L2 LINE L2 -886 2428 2285 5038 186 55 67 chr20 34055714 34056179 -32611826 - L1MB3 LINE L1 -9 6174 5705 2257 100 0 0 chr20 34056179 34056468 -32611537 + AluSx SINE Alu 1 289 -23 5038 186 55 67 chr20 34056468 34056530 -32611475 - L1MB3 LINE L1 -478 5705 5644 216 0 0 0 chr20 34056530 34056554 -32611451 + (TTAGGG)n Simple_repeat Simple_repeat 2 25 0 5038 186 55 67 chr20 34056554 34057068 -32610937 - L1MB3 LINE L1 -539 5644 5125 2248 85 0 44 chr20 34057068 34057386 -32610619 - AluY SINE Alu -7 304 1 5038 186 55 67 chr20 34057386 34057403 -32610602 - L1MB3 LINE L1 -1058 5125 5109 2111 115 3 31 chr20 34057403 34057725 -32610280 - AluSp SINE Alu 0 313 1 5038 186 55 67 chr20 34057725 34057812 -32610193 - L1MB3 LINE L1 -1074 5109 5022 2104 118 0 7 chr20 34057812 34058108 -32609897 - AluSg SINE Alu -16 294 1 5038 186 55 67 chr20 34058108 34059481 -32608524 - L1MB3 LINE L1 -1161 5022 3689 288 229 10 31 chr20 34059665 34059761 -32608244 - MLT1J LTR MaLR -4 507 414 905 238 58 19 chr20 34059790 34060155 -32607850 + L1M4 LINE L1 2887 3265 -2881 1931 150 23 3 chr20 34060345 34060645 -32607360 + AluJb SINE Alu 1 306 -6 1613 86 5 0 chr20 34060771 34060980 -32607025 - AluSp SINE Alu 0 313 104 296 179 0 0 chr20 34060982 34061038 -32606967 + Alu SINE Alu 238 293 -7 1135 238 77 32 chr20 34061043 34061133 -32606872 + L1M4 LINE L1 3875 3959 -2187 2483 77 0 0 chr20 34061133 34061432 -32606573 - AluY SINE Alu -12 299 1 1135 238 77 32 chr20 34061432 34061607 -32606398 + L1M4 LINE L1 3959 4125 -2021 2290 113 0 0 chr20 34061607 34061918 -32606087 + AluSx SINE Alu 1 311 -1 1135 238 77 32 chr20 34061918 34062092 -32605913 + L1M4 LINE L1 4125 4335 -1811 438 270 110 105 chr20 34062140 34062321 -32605684 - MLT1J LTR MaLR -110 401 222 291 28 0 0 chr20 34062321 34062357 -32605648 + (CA)n Simple_repeat Simple_repeat 2 37 0 438 270 110 105 chr20 34062357 34062395 -32605610 - MLT1J LTR MaLR -289 222 186 2060 133 0 7 chr20 34062395 34062689 -32605316 - AluSx SINE Alu -20 292 1 438 270 110 105 chr20 34062689 34062860 -32605145 - MLT1J LTR MaLR -325 186 8 615 182 0 0 chr20 34063422 34063521 -32604484 + FLAM_C SINE Alu 24 122 -21 24 32 0 0 chr20 34063521 34063552 -32604453 + AT_rich Low_complexity Low_complexity 1 31 0 1784 179 27 0 chr20 34063684 34063981 -32604024 - AluJo SINE Alu -5 307 3 378 0 0 0 chr20 34064772 34064814 -32603191 + (TG)n Simple_repeat Simple_repeat 2 43 0 2141 102 43 23 chr20 34065193 34065496 -32602509 + AluSq SINE Alu 2 310 -3 192 347 53 0 chr20 34066987 34067062 -32600943 + MIR SINE MIR 38 116 -92 10695 36 3 103 chr20 34067262 34068800 -32599205 - SVA Other Other -1 1385 1 22 0 0 0 chr20 34068963 34068985 -32599020 + AT_rich Low_complexity Low_complexity 1 22 0 2112 117 13 0 chr20 34070347 34070647 -32597358 + AluSp SINE Alu 1 304 -9 26 50 0 0 chr20 34070661 34070701 -32597304 + AT_rich Low_complexity Low_complexity 1 40 0 334 249 236 18 chr20 34071116 34071281 -32596724 - MIR SINE MIR -10 252 52 301 267 253 7 chr20 34071602 34071748 -32596257 + MIR SINE MIR 7 188 -74 21 57 0 0 chr20 34071848 34071883 -32596122 + AT_rich Low_complexity Low_complexity 1 35 0 247 188 31 0 chr20 34072377 34072441 -32595564 + HsTC2 DNA Tc2 3 68 -1830 2249 138 0 0 chr20 34072986 34073297 -32594708 - AluSx SINE Alu -1 311 1 2243 102 0 14 chr20 34073306 34073600 -32594405 - AluSp SINE Alu -23 290 1 1842 127 22 115 chr20 34074613 34074829 -32593176 - THE1B LTR MaLR 0 364 200 2214 117 0 0 chr20 34074829 34075120 -32592885 + AluSc SINE Alu 1 291 -18 1842 127 22 115 chr20 34075120 34075304 -32592701 - THE1B LTR MaLR -164 200 1 11229 96 5 14 chr20 34075304 34076899 -32591106 - THE1B-int LTR MaLR 0 1580 1 2151 110 25 25 chr20 34076899 34077253 -32590752 - THE1B LTR MaLR -10 354 1 275 190 89 0 chr20 34077797 34077876 -32590129 - L1ME2 LINE L1 -2 6231 6146 1873 194 141 28 chr20 34078062 34078715 -32589290 - L1ME2 LINE L1 -177 6054 5328 1274 183 8 32 chr20 34078792 34079038 -32588967 - AluJo SINE Alu -21 291 52 316 182 0 118 chr20 34079039 34079110 -32588895 - L1ME2 LINE L1 -3108 3107 3029 1531 204 3 29 chr20 34079110 34079418 -32588587 - AluJo SINE Alu -12 300 1 2203 123 0 0 chr20 34079424 34079724 -32588281 - AluSx SINE Alu -12 300 1 316 182 0 118 chr20 34079724 34079755 -32588250 - L1ME2 LINE L1 -3191 3024 3011 230 0 0 32 chr20 34079755 34079786 -32588219 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1530 168 58 17 chr20 34079789 34080080 -32587925 - AluJb SINE Alu -9 303 1 2251 94 7 3 chr20 34080111 34080410 -32587595 - AluY SINE Alu -11 300 1 1171 236 85 62 chr20 34080411 34080755 -32587250 - L1ME2 LINE L1 -4072 2324 1990 2298 113 0 0 chr20 34080755 34081055 -32586950 + AluSq SINE Alu 1 300 -13 1171 236 85 62 chr20 34081055 34081425 -32586580 - L1ME2 LINE L1 -4406 1990 1593 410 261 87 79 chr20 34081437 34081531 -32586474 + L1MC5 LINE L1 7666 7758 -203 2026 148 10 3 chr20 34081531 34081841 -32586164 + AluSx SINE Alu 1 312 0 410 261 87 79 chr20 34081841 34081864 -32586141 + L1MC5 LINE L1 7758 7779 -182 1591 198 0 3 chr20 34081864 34082152 -32585853 + AluJo SINE Alu 11 297 -15 410 261 87 79 chr20 34082152 34082286 -32585719 + L1MC5 LINE L1 7779 7920 -41 1094 200 113 40 chr20 34083407 34083487 -32584518 + L1MB4 LINE L1 5360 5433 -735 1837 117 98 0 chr20 34083487 34083752 -32584253 + AluSg SINE Alu 1 291 -19 1094 200 113 40 chr20 34083752 34084017 -32583988 + L1MB4 LINE L1 5433 5733 -435 368 198 70 0 chr20 34084029 34084115 -32583890 - Tigger5 DNA MER2_type 0 2323 2232 301 149 0 0 chr20 34084161 34084205 -32583800 - Tigger5 DNA MER2_type -2268 55 12 281 200 14 29 chr20 34084205 34084275 -32583730 - Tigger5 DNA MER2_type -1 2322 2254 1774 148 34 31 chr20 34084290 34084676 -32583329 + L1MB4 LINE L1 5794 6180 0 832 193 0 29 chr20 34085342 34085513 -32582492 + FRAM SINE Alu 1 160 -16 272 294 79 48 chr20 34086073 34086199 -32581806 + L2 LINE L2 3141 3270 -2 1960 142 7 3 chr20 34087047 34087342 -32580663 + AluSx SINE Alu 1 296 -16 3510 142 34 57 chr20 34087598 34087777 -32580228 - L1MA5 LINE L1 -2 6298 6116 1774 186 0 0 chr20 34087777 34088062 -32579943 + AluJb SINE Alu 3 287 -25 2050 98 0 44 chr20 34088070 34088366 -32579639 + AluSq SINE Alu 3 312 0 244 0 0 0 chr20 34088366 34088393 -32579612 + (TAAA)n Simple_repeat Simple_repeat 2 148 0 207 0 0 0 chr20 34088393 34088416 -32579589 + (TA)n Simple_repeat Simple_repeat 1 23 0 3510 142 34 57 chr20 34088416 34088931 -32579074 - L1MA5 LINE L1 -189 6111 5609 1102 146 98 93 chr20 34088931 34089177 -32578828 + AluSx SINE Alu 41 287 -25 13344 196 59 60 chr20 34089189 34089622 -32578383 - L1MA5 LINE L1 -742 5555 5123 2311 87 10 0 chr20 34089622 34089932 -32578073 + AluSp SINE Alu 1 313 0 13344 196 59 60 chr20 34089932 34090098 -32577907 - L1MA5 LINE L1 -1174 5123 4958 2026 136 0 0 chr20 34090098 34090393 -32577612 - AluSg SINE Alu -15 295 1 13344 196 59 60 chr20 34090393 34090666 -32577339 - L1MA5 LINE L1 -1339 4958 4686 1873 152 3 7 chr20 34090666 34090976 -32577029 - AluSx SINE Alu -3 309 1 13344 196 59 60 chr20 34090976 34092075 -32575930 - L1MA5 LINE L1 -1611 4686 3588 2268 84 0 0 chr20 34092075 34092372 -32575633 - AluY SINE Alu -14 297 1 426 45 30 0 chr20 34092375 34092441 -32575564 - AluY SINE Alu 0 310 243 13344 196 59 60 chr20 34092441 34094220 -32573785 - L1MA5 LINE L1 -2711 3586 1760 486 253 89 42 chr20 34094296 34094533 -32573472 - MER20B DNA MER1_type -21 762 515 2358 76 3 0 chr20 34094592 34094893 -32573112 + AluSp SINE Alu 1 302 -11 930 214 6 6 chr20 34095335 34095508 -32572497 + FAM SINE Alu 1 173 -2 2056 101 42 0 chr20 34095527 34095814 -32572191 + AluSq SINE Alu 1 299 -14 1854 137 25 0 chr20 34095839 34096116 -32571889 + AluSx SINE Alu 5 288 -24 385 276 45 22 chr20 34096320 34096454 -32571551 - MER20B DNA MER1_type -591 192 56 435 231 19 7 chr20 34096835 34096928 -32571077 - MER5A DNA MER1_type -3 186 82 1833 174 3 0 chr20 34096969 34097274 -32570731 - AluSx SINE Alu -1 311 6 535 191 9 26 chr20 34097277 34097392 -32570613 - MER5A DNA MER1_type -75 114 2 274 333 0 0 chr20 34097581 34097689 -32570316 - L1MB7 LINE L1 -72 6112 6005 1618 165 25 87 chr20 34098046 34098126 -32569879 - L1MB7 LINE L1 -3 6181 6098 255 31 0 0 chr20 34098126 34098158 -32569847 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2005 123 0 0 chr20 34098158 34098442 -32569563 - AluSx SINE Alu -28 284 1 1618 165 25 87 chr20 34098442 34098658 -32569347 - L1MB7 LINE L1 -85 6099 5911 2099 85 7 10 chr20 34098658 34098952 -32569053 - AluSg SINE Alu -17 293 1 1618 165 25 87 chr20 34098952 34099046 -32568959 - L1MB7 LINE L1 -273 5911 5813 630 119 71 40 chr20 34099049 34099175 -32568830 - L1MB3 LINE L1 -5 6178 6049 1423 187 8 0 chr20 34099175 34099442 -32568563 - AluJb SINE Alu -23 289 21 3332 140 87 81 chr20 34099442 34099501 -32568504 - L1MB3 LINE L1 -110 6073 6016 1891 132 97 13 chr20 34099501 34099812 -32568193 + MER1B DNA MER1_type 1 337 0 3332 140 87 81 chr20 34099812 34100691 -32567314 - L1MB3 LINE L1 -167 6016 5162 840 120 0 0 chr20 34101627 34101744 -32566261 + FLAM_C SINE Alu 1 117 -16 243 0 0 0 chr20 34103542 34103569 -32564436 + (T)n Simple_repeat Simple_repeat 1 27 0 575 111 89 0 chr20 34103842 34103932 -32564073 + FLAM_A SINE Alu 35 132 -10 4588 98 28 18 chr20 34104645 34105298 -32562707 - PABL_A LTR ERV1 0 660 2 233 300 221 0 chr20 34106327 34106467 -32561538 - MIR SINE MIR 0 262 92 289 309 122 42 chr20 34106599 34106637 -32561368 + L2 LINE L2 2492 2526 -788 2148 72 14 3 chr20 34106637 34106927 -32561078 - AluSx SINE Alu -19 293 1 289 309 122 42 chr20 34106927 34107150 -32560855 + L2 LINE L2 2526 2774 -540 2203 74 7 10 chr20 34107151 34107449 -32560556 - AluSg SINE Alu -13 297 1 1782 207 144 18 chr20 34107748 34108260 -32559745 - L1MD3 LINE L1 -1 7994 7418 1975 99 7 13 chr20 34108990 34109293 -32558712 - AluJo SINE Alu -11 301 1 358 307 98 44 chr20 34109886 34110091 -32557914 - MIR SINE MIR -9 253 38 617 103 0 130 chr20 34110591 34110722 -32557283 - L1MA4 LINE L1 -11 6289 6177 2152 89 0 29 chr20 34110722 34111035 -32556970 - AluY SINE Alu -7 304 1 617 103 0 130 chr20 34111035 34111049 -32556956 - L1MA4 LINE L1 -123 6177 6163 871 143 48 18 chr20 34111049 34111217 -32556788 - L1M1 LINE L1 -537 5766 5594 1414 143 29 0 chr20 34111235 34111479 -32556526 - L1M1 LINE L1 -1262 4884 4634 1357 138 0 30 chr20 34111621 34111852 -32556153 - AluJb SINE Alu -88 224 1 1849 107 0 91 chr20 34111991 34112310 -32555695 - AluSx SINE Alu -12 300 11 226 286 60 0 chr20 34112372 34112456 -32555549 - L1ME4a LINE L1 -95 6026 5938 537 176 0 0 chr20 34112516 34112601 -32555404 + AluJb SINE Alu 179 263 -49 329 280 208 12 chr20 34112633 34112883 -32555122 - L1MC4a LINE L1 -1890 5918 5620 1875 139 17 0 chr20 34112950 34113252 -32554753 + AluSx SINE Alu 1 307 -5 295 276 39 102 chr20 34113457 34113539 -32554466 - L1ME4a LINE L1 -305 5816 5730 2060 127 0 7 chr20 34113539 34113847 -32554158 - AluSx SINE Alu -6 306 1 295 276 39 102 chr20 34113847 34114018 -32553987 - L1ME4a LINE L1 -391 5730 5579 1975 127 27 0 chr20 34114110 34114409 -32553596 - AluSx SINE Alu -5 307 1 1644 153 46 0 chr20 34114863 34115144 -32552861 + AluJb SINE Alu 1 294 -18 374 250 12 0 chr20 34115231 34115315 -32552690 + L2 LINE L2 3164 3248 -65 317 337 135 0 chr20 34115314 34115477 -32552528 + MIR SINE MIR 62 246 -16 * 1874 148 10 10 chr20 34115562 34115872 -32552133 - AluJb SINE Alu -2 310 1 407 235 49 56 chr20 34115881 34116043 -32551962 - L3 LINE CR1 -607 970 810 903 284 106 17 chr20 34116374 34116962 -32551043 + L2 LINE L2 2657 3309 -4 280 314 74 48 chr20 34116974 34117203 -32550802 - L3 LINE CR1 -771 806 572 352 270 70 27 chr20 34117373 34117558 -32550447 - L1ME4a LINE L1 -224 5897 5705 180 240 53 93 chr20 34117638 34117713 -32550292 + L2 LINE L2 3236 3307 -6 2137 86 17 7 chr20 34117820 34118122 -32549883 - AluY SINE Alu -6 305 1 204 40 0 0 chr20 34119581 34119606 -32548399 + (T)n Simple_repeat Simple_repeat 1 25 0 681 74 53 0 chr20 34119610 34119705 -32548300 - HY3 scRNA scRNA -1 100 1 209 289 89 4 chr20 34120191 34120281 -32547724 - MIR SINE MIR -65 143 40 532 232 181 23 chr20 34120360 34120537 -32547468 + MIR SINE MIR 19 223 -39 388 355 7 13 chr20 34120647 34120802 -32547203 - MER5A DNA MER1_type 0 189 36 2810 3 0 0 chr20 34121129 34121440 -32546565 + AluYa5 SINE Alu 1 311 0 1373 151 28 85 chr20 34121782 34122101 -32545904 + AluJo SINE Alu 1 301 -11 2367 74 0 0 chr20 34122544 34122843 -32545162 + AluSq SINE Alu 1 299 -14 532 278 49 25 chr20 34123366 34123528 -32544477 + MIR SINE MIR 6 171 -91 328 241 57 71 chr20 34123632 34123773 -32544232 - MIR SINE MIR -70 192 54 386 252 37 19 chr20 34124206 34124313 -32543692 + L2 LINE L2 3197 3305 -8 235 270 40 0 chr20 34124773 34124847 -32543158 - L2 LINE L2 -61 3252 3176 462 286 97 25 chr20 34125293 34125489 -32542516 - MIR SINE MIR -14 248 39 2251 104 0 0 chr20 34126636 34126944 -32541061 + AluSg SINE Alu 1 308 -2 2079 80 38 14 chr20 34126952 34127239 -32540766 + AluSx SINE Alu 1 294 -18 233 328 121 15 chr20 34127421 34127619 -32540386 + MIR SINE MIR 36 254 -8 209 341 0 44 chr20 34128180 34128315 -32539690 - L2 LINE L2 -182 3090 2962 195 290 116 65 chr20 34129282 34129420 -32538585 + MIR3 SINE MIR 22 166 -42 2318 77 0 0 chr20 34129566 34129863 -32538142 + AluSg SINE Alu 5 301 -9 241 238 0 5 chr20 34130456 34130544 -32537461 + L2 LINE L2 3182 3313 0 1559 103 121 50 chr20 34131083 34131365 -32536640 - AluJo SINE Alu -10 302 1 1092 98 37 0 chr20 34131389 34131552 -32536453 + AluJb SINE Alu 134 302 -10 199 264 80 48 chr20 34131931 34132056 -32535949 + MIR3 SINE MIR 4 132 -76 1571 141 12 87 chr20 34132495 34132619 -32535386 + AluJb SINE Alu 1 133 -179 1774 124 76 0 chr20 34132619 34132894 -32535111 - AluSx SINE Alu -16 296 1 1571 141 12 87 chr20 34132894 34133103 -32534902 + AluJb SINE Alu 133 309 -3 207 267 0 0 chr20 34133134 34133179 -32534826 + MIR SINE MIR 56 100 -162 * 517 182 189 40 chr20 34133177 34133325 -32534680 + MER5A DNA MER1_type 17 186 -3 320 333 0 31 chr20 34133325 34133454 -32534551 + MIR SINE MIR 86 210 -52 1620 148 40 4 chr20 34135666 34135944 -32532061 + AluJo SINE Alu 1 288 -24 2142 105 0 7 chr20 34136006 34136312 -32531693 - AluSx SINE Alu -8 304 1 367 216 179 58 chr20 34136505 34136695 -32531310 - L1MC4 LINE L1 -1 8041 7829 338 174 326 28 chr20 34136729 34136873 -32531132 - L1ME2 LINE L1 -14 6150 5964 229 297 33 22 chr20 34137105 34137196 -32530809 + Tigger8 DNA MER2_type 8 99 -567 263 267 67 0 chr20 34137320 34137395 -32530610 + Tigger8 DNA MER2_type 406 485 -181 1680 148 11 25 chr20 34138288 34138566 -32529439 - AluSx SINE Alu -37 275 2 594 261 165 24 chr20 34138813 34139217 -32528788 - L2 LINE L2 -655 2659 2198 1915 146 39 0 chr20 34139217 34139498 -32528507 + AluJb SINE Alu 1 292 -20 2417 84 7 0 chr20 34139507 34139805 -32528200 + AluSp SINE Alu 1 300 -13 503 322 6 23 chr20 34139805 34139982 -32528023 - MLT1J LTR MaLR -219 292 119 182 247 91 0 chr20 34140065 34140142 -32527863 - L2 LINE L2 -1714 1600 1517 27 0 0 0 chr20 34140467 34140494 -32527511 + AT_rich Low_complexity Low_complexity 1 27 0 567 95 175 71 chr20 34140515 34140565 -32527440 - FLAM_C SINE Alu -172 140 97 1703 147 73 20 chr20 34140565 34140919 -32527086 + THE1C LTR MaLR 1 373 -2 567 95 175 71 chr20 34140919 34140994 -32527011 - FLAM_C SINE Alu -215 97 2 2411 100 0 0 chr20 34141803 34142103 -32525902 - AluSq SINE Alu -13 300 1 2071 131 27 0 chr20 34142126 34142423 -32525582 - AluSx SINE Alu -7 305 1 1412 224 73 5 chr20 34142576 34142960 -32525045 - MER66A LTR ERV1 -40 438 29 188 276 133 19 chr20 34143422 34143527 -32524478 - L2 LINE L2 -87 3185 3069 * 385 242 86 16 chr20 34143520 34143648 -32524357 - L2 LINE L2 -2 3311 3175 1774 234 70 66 chr20 34143661 34144067 -32523938 + L1ME2 LINE L1 5423 5826 -338 2007 128 21 21 chr20 34144067 34144356 -32523649 + AluSg SINE Alu 5 293 -17 1774 234 70 66 chr20 34144356 34144565 -32523440 + L1ME2 LINE L1 5826 6044 -120 1998 84 54 27 chr20 34144565 34144861 -32523144 - AluSx SINE Alu -8 304 1 1774 234 70 66 chr20 34144861 34144969 -32523036 + L1ME2 LINE L1 6044 6150 -14 1951 132 3 17 chr20 34145106 34145395 -32522610 - AluSx SINE Alu -26 286 2 902 237 111 57 chr20 34145510 34146004 -32522001 - L2 LINE L2 -263 3050 2402 2061 146 7 3 chr20 34146004 34146313 -32521692 + AluSq SINE Alu 1 310 -3 902 237 111 57 chr20 34146313 34146481 -32521524 - L2 LINE L2 -911 2402 2245 688 215 149 5 chr20 34146722 34146917 -32521088 + MER58A DNA MER1_type 1 223 -1 474 272 136 24 chr20 34146969 34147219 -32520786 - L1ME LINE L1 -363 5758 5481 2629 71 0 0 chr20 34147460 34147769 -32520236 - AluSc SINE Alu 0 309 1 1684 123 6 126 chr20 34147771 34148105 -32519900 - AluJb SINE Alu -18 294 1 1004 151 76 23 chr20 34148178 34148237 -32519768 - AluJo SINE Alu -108 204 150 2280 121 3 3 chr20 34148237 34148542 -32519463 - AluSx SINE Alu -7 305 1 1004 151 76 23 chr20 34148542 34148654 -32519351 - AluJo SINE Alu -162 150 24 844 228 0 6 chr20 34148751 34148913 -32519092 - FRAM SINE Alu -15 161 1 2620 53 7 0 chr20 34148935 34149239 -32518766 - AluY SINE Alu -5 306 1 22 0 0 0 chr20 34149282 34149304 -32518701 + AT_rich Low_complexity Low_complexity 1 22 0 591 313 63 78 chr20 34149364 34149697 -32518308 - L1MDa LINE L1 -3346 3194 2871 2163 126 0 13 chr20 34149697 34149998 -32518007 - AluSx SINE Alu -15 297 1 591 313 63 78 chr20 34149998 34150201 -32517804 - L1MDa LINE L1 -3669 2871 2666 228 198 116 47 chr20 34150227 34150313 -32517692 - L1MDa LINE L1 -3907 2633 2542 2251 78 0 14 chr20 34150742 34151023 -32516982 + AluSc SINE Alu 1 277 -32 205 162 0 0 chr20 34152196 34152233 -32515772 + G-rich Low_complexity Low_complexity 1 37 0 455 302 136 26 chr20 34154303 34154797 -32513208 + L2 LINE L2 2239 2786 -528 205 284 63 32 chr20 34154867 34154962 -32513043 + L2 LINE L2 2943 3040 -273 211 296 148 0 chr20 34155406 34155514 -32512491 - MIR SINE MIR -55 153 30 280 227 15 30 chr20 34155678 34155744 -32512261 - MIR SINE MIR -115 147 83 489 123 0 12 chr20 34156147 34156228 -32511777 - MER116 DNA Mariner 0 80 1 2205 76 62 3 chr20 34156383 34156672 -32511333 + AluSp SINE Alu 1 306 -7 2390 205 40 57 chr20 34156695 34157473 -32510532 + L1MD3 LINE L1 7019 7995 0 584 222 48 0 chr20 34157484 34157610 -32510395 + FLAM_A SINE Alu 1 132 -1 237 190 77 22 chr20 34158257 34158339 -32509666 + MIR SINE MIR 80 144 -64 2062 79 28 38 chr20 34158364 34158655 -32509350 - AluSc SINE Alu -21 288 1 396 235 0 18 chr20 34158806 34158972 -32509033 + (CA)n Simple_repeat Simple_repeat 2 164 0 285 293 0 20 chr20 34158988 34159087 -32508918 + (CA)n Simple_repeat Simple_repeat 2 98 0 277 217 0 19 chr20 34159103 34159209 -32508796 + (CA)n Simple_repeat Simple_repeat 2 105 0 180 135 54 0 chr20 34159895 34159932 -32508073 - L2 LINE L2 -17 3255 3217 258 32 0 0 chr20 34160900 34160931 -32507074 + (TC)n Simple_repeat Simple_repeat 1 31 0 343 284 234 21 chr20 34160969 34161208 -32506797 + L2 LINE L2 2983 3272 0 1888 145 26 19 chr20 34162025 34162335 -32505670 + AluJo SINE Alu 1 312 0 1910 144 3 10 chr20 34162336 34162628 -32505377 - AluSq SINE Alu -23 290 1 336 284 0 11 chr20 34162918 34163013 -32504992 - L2 LINE L2 -48 3265 3172 482 237 17 0 chr20 34163030 34163148 -32504857 + MIR SINE MIR 70 189 -73 2139 98 56 3 chr20 34163508 34163794 -32504211 - AluSc SINE Alu -8 301 1 299 233 70 23 chr20 34164127 34164213 -32503792 - MIR SINE MIR -77 185 96 191 156 0 0 chr20 34164814 34164846 -32503159 - L2 LINE L2 -259 3054 3023 388 315 46 34 chr20 34165072 34165256 -32502749 + L1MC/D LINE L1 5519 5699 -439 230 97 16 81 chr20 34165268 34165330 -32502675 + (TTTA)n Simple_repeat Simple_repeat 3 60 0 671 121 0 0 chr20 34165332 34165431 -32502574 - AluS SINE Alu -214 99 1 2122 142 0 22 chr20 34165462 34165773 -32502232 + AluSx SINE Alu 1 304 -8 738 207 0 0 chr20 34166107 34166247 -32501758 - FLAM_C SINE Alu -2 141 2 236 353 42 25 chr20 34167325 34167444 -32500561 + MER5A DNA MER1_type 24 144 -45 192 111 0 0 chr20 34167502 34167529 -32500476 - MER5A DNA MER1_type -113 76 50 207 281 79 11 chr20 34167883 34167972 -32500033 + MIR SINE MIR 86 180 -82 244 160 163 13 chr20 34169078 34169173 -32498832 + MIR SINE MIR 47 146 -62 958 98 0 49 chr20 34169194 34169337 -32498668 + FLAM_C SINE Alu 5 140 -3 613 204 68 8 chr20 34169433 34169705 -32498300 - MLT1D LTR MaLR -3 502 180 895 177 0 0 chr20 34169729 34169870 -32498135 - FRAM SINE Alu -22 154 14 446 138 100 0 chr20 34169880 34169960 -32498045 - L1MC1 LINE L1 -6 6327 6240 797 161 115 35 chr20 34169962 34170136 -32497869 - MLT1D LTR MaLR -317 188 1 28 48 0 0 chr20 34170214 34170256 -32497749 + AT_rich Low_complexity Low_complexity 1 42 0 195 289 0 0 chr20 34170272 34170317 -32497688 + L2 LINE L2 3210 3254 -18 2184 125 0 0 chr20 34170531 34170852 -32497153 + AluSx SINE Alu 1 312 0 477 184 58 39 chr20 34170865 34170968 -32497037 + MER5B DNA MER1_type 74 178 0 304 296 119 19 chr20 34173024 34173183 -32494822 - MIR SINE MIR -56 206 32 266 317 69 10 chr20 34173778 34173879 -32494126 - L2 LINE L2 -10 3262 3156 470 168 376 0 chr20 34174091 34174240 -32493765 - MER3 DNA MER1_type -4 205 1 835 228 44 35 chr20 34174242 34174470 -32493535 + MIR SINE MIR 34 262 0 2013 151 7 7 chr20 34175495 34175794 -32492211 + AluJb SINE Alu 1 299 -13 213 172 35 103 chr20 34175799 34175857 -32492148 - MIR SINE MIR -56 152 99 685 288 33 28 chr20 34177178 34177393 -32490612 + MIR SINE MIR 23 238 -24 1891 134 9 70 chr20 34177599 34177777 -32490228 - AluJo SINE Alu -3 309 122 210 37 0 0 chr20 34177777 34177804 -32490201 + (TTG)n Simple_repeat Simple_repeat 1 27 0 2085 133 0 0 chr20 34177804 34178083 -32489922 - AluSx SINE Alu -31 281 3 1891 134 9 70 chr20 34178083 34178232 -32489773 - AluJo SINE Alu -188 124 1 289 274 179 8 chr20 34179686 34179803 -32488202 + L2 LINE L2 3136 3272 0 851 85 78 0 chr20 34180004 34180133 -32487872 + MER85 DNA T2_type 1 139 0 973 147 16 42 chr20 34180171 34180361 -32487644 + MER5A DNA MER1_type 5 189 0 3800 149 19 42 chr20 34180455 34181101 -32486904 - L1MA7 LINE L1 -6 6285 5660 1939 109 49 0 chr20 34181101 34181367 -32486638 + AluSg SINE Alu 20 298 -12 3800 149 19 42 chr20 34181367 34181521 -32486484 - L1MA7 LINE L1 -631 5660 5504 335 283 161 12 chr20 34181869 34182118 -32485887 + L1ME3A LINE L1 5595 5873 -297 405 0 0 0 chr20 34182202 34182247 -32485758 + (CA)n Simple_repeat Simple_repeat 2 46 0 2277 103 3 0 chr20 34182458 34182748 -32485257 - AluSc SINE Alu -18 291 1 2445 92 7 0 chr20 34182748 34183053 -32484952 - AluSq SINE Alu -5 308 1 2050 136 0 11 chr20 34183372 34183659 -32484346 + AluSx SINE Alu 1 284 -28 647 80 0 10 chr20 34183659 34183759 -32484246 + (CATAA)n Simple_repeat Simple_repeat 2 100 0 793 259 74 77 chr20 34183774 34183838 -32484167 + L1MC4a LINE L1 2202 2265 -3881 2581 63 3 0 chr20 34183838 34184138 -32483867 + AluY SINE Alu 1 301 -10 793 259 74 77 chr20 34184138 34184709 -32483296 + L1MC4a LINE L1 2265 2835 -3311 633 113 48 8 chr20 34184739 34184863 -32483142 - L1MA8 LINE L1 -113 6178 6050 449 277 136 40 chr20 34184868 34185004 -32483001 + L1MC4a LINE L1 2860 2982 -3164 2343 90 3 6 chr20 34185004 34185315 -32482690 + AluY SINE Alu 1 310 -1 449 277 136 40 chr20 34185315 34185708 -32482297 + L1MC4a LINE L1 2982 3440 -2706 327 286 112 26 chr20 34185678 34186108 -32481897 + L1MC4 LINE L1 7560 8026 -16 * 1946 147 13 17 chr20 34186154 34186453 -32481552 + AluJb SINE Alu 3 300 -12 624 313 39 30 chr20 34186479 34186885 -32481120 + L1MC4a LINE L1 4644 5053 -1093 403 127 0 28 chr20 34186921 34186992 -32481013 + AluJ/FRAM SINE Alu 228 296 -16 2114 146 0 0 chr20 34186994 34187296 -32480709 + AluJb SINE Alu 3 304 -8 2066 186 48 98 chr20 34187310 34187637 -32480368 + L1MC4a LINE L1 5621 5963 -1845 1919 109 0 0 chr20 34187637 34187884 -32480121 + AluSq SINE Alu 49 295 -18 2066 186 48 98 chr20 34187884 34187908 -32480097 + L1MC4a LINE L1 5963 5987 -1821 2645 51 0 13 chr20 34187908 34188221 -32479784 + AluY SINE Alu 1 309 -2 2066 186 48 98 chr20 34188221 34188300 -32479705 + L1MC4a LINE L1 5987 6068 -1740 1827 149 65 0 chr20 34188300 34188622 -32479383 - MER2 DNA MER2_type -1 343 1 2066 186 48 98 chr20 34188622 34188915 -32479090 + L1MC4a LINE L1 6068 6310 -1498 266 125 95 2 chr20 34188915 34189149 -32478856 + AluSx SINE Alu 1 302 0 2086 215 78 8 chr20 34189153 34189688 -32478317 + L1MD3 LINE L1 7423 7995 0 358 324 73 6 chr20 34189802 34189981 -32478024 - L1M4 LINE L1 -3497 2649 2459 2244 223 120 21 chr20 34190013 34190687 -32477318 + L1ME2 LINE L1 5403 6154 -10 266 266 62 62 chr20 34190733 34190910 -32477095 + L1MC4 LINE L1 7836 8012 -30 858 114 7 50 chr20 34191021 34191161 -32476844 + AluJb SINE Alu 1 134 -178 420 302 32 17 chr20 34191331 34191509 -32476496 - L2 LINE L2 -302 2970 2789 1108 161 10 36 chr20 34191959 34192152 -32475853 - AluJo SINE Alu -34 278 91 1993 146 10 0 chr20 34192268 34192562 -32475443 + AluJb SINE Alu 1 297 -15 861 192 33 0 chr20 34192981 34193163 -32474842 - MER3 DNA MER1_type -21 188 1 2105 97 0 0 chr20 34193222 34193490 -32474515 + AluSx SINE Alu 1 268 -44 334 100 33 0 chr20 34193492 34193552 -32474453 + A-rich Low_complexity Low_complexity 2 63 0 2415 89 3 0 chr20 34193850 34194152 -32473853 + AluSp SINE Alu 1 303 -10 2011 152 175 8 chr20 34194598 34194993 -32473012 + MER65C LTR ERV1 1 461 0 210 71 0 0 chr20 34195086 34195097 -32472908 + (TAAAA)n Simple_repeat Simple_repeat 1 11 -308 2090 121 0 0 chr20 34195097 34195377 -32472628 + AluSx SINE Alu 1 280 -32 210 71 0 0 chr20 34195377 34195405 -32472600 + (TAAAA)n Simple_repeat Simple_repeat 5 32 0 2299 112 0 0 chr20 34195412 34195717 -32472288 + AluSx SINE Alu 1 305 -7 365 307 59 40 chr20 34195776 34195978 -32472027 - L1ME3A LINE L1 0 6170 5965 2508 213 91 51 chr20 34196132 34196955 -32471050 - L1MC5 LINE L1 -469 7492 6637 260 27 27 0 chr20 34196955 34196992 -32471013 + (CA)n Simple_repeat Simple_repeat 2 39 0 402 215 69 47 chr20 34196993 34197229 -32470776 - MER102a DNA MER1_type -21 309 21 458 180 313 33 chr20 34198621 34198771 -32469234 - MIR SINE MIR 0 262 71 990 255 88 75 chr20 34198811 34199072 -32468933 - L1MC4 LINE L1 0 8042 7786 2511 66 3 0 chr20 34199072 34199374 -32468631 + AluY SINE Alu 1 303 -8 990 255 88 75 chr20 34199374 34199845 -32468160 - L1MC4 LINE L1 -256 7786 7268 2235 109 0 6 chr20 34199845 34200156 -32467849 - AluSg1 SINE Alu 0 309 1 990 255 88 75 chr20 34200156 34200290 -32467715 - L1MC4 LINE L1 -774 7268 7137 1447 221 189 19 chr20 34200291 34200869 -32467136 + LTR1B LTR ERV1 1 676 -150 709 135 0 0 chr20 34200917 34201013 -32466992 - AluJ/FLAM SINE Alu -216 96 1 2211 106 3 3 chr20 34201169 34201471 -32466534 - AluSx SINE Alu -10 302 1 434 249 61 50 chr20 34201473 34201654 -32466351 - L1MC4 LINE L1 -985 7057 6875 308 281 219 12 chr20 34201856 34202020 -32465985 - L3 LINE CR1 -76 1501 1304 1516 153 12 90 chr20 34202098 34202419 -32465586 + AluJo SINE Alu 1 296 -16 2253 123 0 13 chr20 34202446 34202762 -32465243 - AluSx SINE Alu 0 312 1 2500 92 0 12 chr20 34202850 34203188 -32464817 + THE1C LTR MaLR 1 334 -41 10425 82 21 20 chr20 34203188 34204462 -32463543 + L1PA8 LINE L1 4026 5305 -867 2330 99 0 10 chr20 34204462 34204774 -32463231 + AluSc SINE Alu 1 309 0 10425 82 21 20 chr20 34204774 34205639 -32462366 + L1PA8 LINE L1 5305 6168 -4 230 107 0 240 chr20 34205675 34205712 -32462293 + THE1C LTR MaLR 319 331 -44 2070 153 3 0 chr20 34205712 34206020 -32461985 - AluSx SINE Alu -3 309 1 230 107 0 240 chr20 34206020 34206057 -32461948 + THE1C LTR MaLR 331 375 0 21 36 0 0 chr20 34206069 34206097 -32461908 + AT_rich Low_complexity Low_complexity 1 28 0 208 326 122 38 chr20 34206132 34206420 -32461585 + L2 LINE L2 2449 2760 -554 * 224 358 0 0 chr20 34206406 34206473 -32461532 + L2 LINE L2 3237 3303 -10 248 241 53 87 chr20 34206820 34207027 -32460978 + L1ME LINE L1 5383 5582 -539 1995 153 0 10 chr20 34207111 34207425 -32460580 + AluJb SINE Alu 1 311 -1 1757 153 27 30 chr20 34207440 34207741 -32460264 + AluJb SINE Alu 1 300 -12 678 283 22 91 chr20 34208099 34208375 -32459630 + MIR SINE MIR 3 259 -3 295 310 90 10 chr20 34208385 34208485 -32459520 - MIR SINE MIR -6 256 149 1565 148 110 40 chr20 34208608 34208950 -32459055 + Tigger7 DNA MER2_type 2 2491 0 25 31 0 0 chr20 34209868 34209900 -32458105 + AT_rich Low_complexity Low_complexity 1 32 0 1798 130 16 0 chr20 34209932 34210185 -32457820 + AluSq SINE Alu 4 260 -53 5292 77 6 1 chr20 34210185 34210858 -32457147 + THE1A-int LTR MaLR 905 1580 0 2322 77 6 37 chr20 34210858 34211185 -32456820 + THE1A LTR MaLR 1 317 -38 488 255 81 0 chr20 34211204 34211353 -32456652 + L1ME4a LINE L1 5959 6119 -2 1766 181 0 16 chr20 34211597 34211901 -32456104 + AluJo SINE Alu 1 299 -13 338 314 179 23 chr20 34212937 34213456 -32454549 + L2 LINE L2 2376 2975 -339 238 179 0 0 chr20 34213556 34213595 -32454410 - L2 LINE L2 -17 3255 3217 2387 66 33 0 chr20 34213627 34213928 -32454077 + AluY SINE Alu 1 311 0 310 288 0 54 chr20 34214005 34214116 -32453889 - MIR SINE MIR -79 183 79 338 308 89 14 chr20 34214171 34214317 -32453688 + L2 LINE L2 3116 3272 0 258 260 115 0 chr20 34214859 34214955 -32453050 - L2 LINE L2 -12 3260 3154 731 231 53 6 chr20 34215162 34215331 -32452674 + L1ME3A LINE L1 5993 6169 -1 2378 89 0 0 chr20 34215334 34215638 -32452367 + AluSg SINE Alu 1 304 -6 932 247 60 49 chr20 34216488 34216733 -32451272 - MIR SINE MIR -13 249 6 298 296 162 32 chr20 34216775 34216991 -32451014 - MIR SINE MIR -9 253 10 592 152 48 19 chr20 34217174 34217279 -32450726 - FRAM SINE Alu -11 165 58 627 291 6 22 chr20 34217358 34217537 -32450468 - MIR SINE MIR -72 190 15 2412 85 13 0 chr20 34218187 34218494 -32449511 + AluSp SINE Alu 1 311 -2 788 194 0 0 chr20 34218622 34218746 -32449259 + FLAM_C SINE Alu 2 125 -18 532 127 0 0 chr20 34218757 34218836 -32449169 + AluS SINE Alu 229 307 -4 880 157 0 90 chr20 34218865 34219043 -32448962 + FRAM SINE Alu 5 166 -10 209 108 27 0 chr20 34219043 34219080 -32448925 + (TA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr20 34219122 34219143 -32448862 + AT_rich Low_complexity Low_complexity 1 21 0 555 240 82 25 chr20 34219147 34219343 -32448662 - L1ME LINE L1 -313 5808 5602 21 36 0 0 chr20 34219365 34219393 -32448612 + AT_rich Low_complexity Low_complexity 1 28 0 2473 67 0 3 chr20 34219401 34219701 -32448304 - AluSq SINE Alu -14 299 1 265 274 44 93 chr20 34219733 34219959 -32448046 - L1ME LINE L1 -560 5561 5347 32 0 0 0 chr20 34220004 34220036 -32447969 + AT_rich Low_complexity Low_complexity 1 32 0 21 0 0 0 chr20 34220392 34220413 -32447592 + AT_rich Low_complexity Low_complexity 1 21 0 415 255 117 43 chr20 34221244 34221298 -32446707 + L1ME LINE L1 5521 5570 -551 806 187 0 8 chr20 34221298 34221432 -32446573 + FLAM_C SINE Alu 1 133 0 415 255 117 43 chr20 34221432 34221659 -32446346 + L1ME LINE L1 5570 5823 -298 2138 123 7 0 chr20 34221668 34221952 -32446053 + AluSx SINE Alu 3 288 -24 372 235 97 98 chr20 34221987 34222116 -32445889 + MLT1G1 LTR MaLR 1 129 -420 2147 116 0 26 chr20 34222116 34222419 -32445586 - AluSg1 SINE Alu -14 295 1 372 235 97 98 chr20 34222419 34222798 -32445207 + MLT1G1 LTR MaLR 129 549 0 3589 262 73 93 chr20 34222868 34223743 -32444262 + HAL1 LINE L1 2 893 -1614 1878 141 43 10 chr20 34223743 34224042 -32443963 - AluJo SINE Alu -3 309 1 3589 262 73 93 chr20 34224042 34224644 -32443361 + HAL1 LINE L1 893 1506 -1001 1508 82 0 82 chr20 34224644 34224820 -32443185 - AluY SINE Alu -5 306 152 576 0 0 0 chr20 34224820 34224884 -32443121 + (TA)n Simple_repeat Simple_repeat 2 65 0 1508 82 0 82 chr20 34224884 34224939 -32443066 - AluY SINE Alu -159 152 94 1919 163 0 3 chr20 34224939 34225238 -32442767 - AluJo SINE Alu -12 300 1 3589 262 73 93 chr20 34225238 34225470 -32442535 + HAL1 LINE L1 1505 1740 -767 2342 89 3 0 chr20 34225470 34225762 -32442243 - AluSg1 SINE Alu -16 293 1 3589 262 73 93 chr20 34225762 34226279 -32441726 + HAL1 LINE L1 1740 2266 -241 1688 184 7 10 chr20 34226279 34226600 -32441405 + AluJb SINE Alu 1 312 0 3589 262 73 93 chr20 34226600 34226668 -32441337 + HAL1 LINE L1 2266 2334 -173 2070 115 14 10 chr20 34226668 34226964 -32441041 - AluSx SINE Alu -15 297 1 3589 262 73 93 chr20 34226964 34227169 -32440836 + HAL1 LINE L1 2334 2457 -50 1939 160 0 13 chr20 34227169 34227469 -32440536 - AluJo SINE Alu -16 296 1 3589 262 73 93 chr20 34227469 34227493 -32440512 + HAL1 LINE L1 2457 2480 -27 200 211 14 183 chr20 34228043 34228185 -32439820 - MIR SINE MIR -73 189 72 2314 100 3 0 chr20 34228691 34229002 -32439003 + AluSp SINE Alu 1 312 -1 1833 155 6 43 chr20 34229004 34229326 -32438679 + AluJb SINE Alu 1 310 -2 2237 107 0 3 chr20 34229358 34229656 -32438349 + AluSx SINE Alu 1 297 -15 221 404 53 9 chr20 34230181 34230295 -32437710 + L3 LINE CR1 1448 1566 -11 187 278 111 0 chr20 34230308 34230362 -32437643 + L2 LINE L2 3163 3222 -50 629 275 133 72 chr20 34231130 34231624 -32436381 + L2 LINE L2 2751 3272 0 2516 64 0 0 chr20 34232217 34232513 -32435492 + AluY SINE Alu 1 296 -15 21 57 0 0 chr20 34232736 34232771 -32435234 + AT_rich Low_complexity Low_complexity 1 35 0 357 125 0 0 chr20 34233578 34233634 -32434371 + (CA)n Simple_repeat Simple_repeat 2 57 0 24 53 0 0 chr20 34233848 34233886 -32434119 + AT_rich Low_complexity Low_complexity 1 38 0 2062 85 3 79 chr20 34233998 34234314 -32433691 - AluSg SINE Alu -18 292 1 1346 149 0 19 chr20 34235316 34235530 -32432475 - AluJb SINE Alu -21 291 82 387 124 0 34 chr20 34235722 34235811 -32432194 + (TA)n Simple_repeat Simple_repeat 2 87 0 1211 144 0 50 chr20 34235842 34236044 -32431961 - AluSg/x SINE Alu -9 303 112 198 0 0 0 chr20 34236898 34236920 -32431085 + (A)n Simple_repeat Simple_repeat 1 22 0 252 214 14 71 chr20 34237616 34237686 -32430319 + L2 LINE L2 3236 3301 -12 793 199 0 0 chr20 34238170 34238301 -32429704 + FLAM_A SINE Alu 1 131 -2 22 56 0 0 chr20 34238322 34238358 -32429647 + AT_rich Low_complexity Low_complexity 1 36 0 2272 67 0 7 chr20 34238711 34239027 -32428978 + AluY SINE Alu 1 314 0 714 267 40 30 chr20 34239154 34239457 -32428548 - L1MCc LINE L1 -2512 4429 4124 666 180 74 42 chr20 34239436 34239517 -32428488 - L1MCc LINE L1 -3106 3835 3758 * 2204 104 0 0 chr20 34239517 34239806 -32428199 - AluSx SINE Alu -23 289 1 666 180 74 42 chr20 34239806 34239913 -32428092 - L1MCc LINE L1 -3183 3758 3641 196 42 0 0 chr20 34239913 34239937 -32428068 + (TTTTC)n Simple_repeat Simple_repeat 2 180 0 1192 153 26 111 chr20 34239937 34240089 -32427916 - AluJo SINE Alu -19 283 168 1647 122 115 14 chr20 34240089 34240368 -32427637 - AluSg1 SINE Alu -2 307 1 1192 153 26 111 chr20 34240368 34240522 -32427483 - AluJo SINE Alu -134 168 3 2173 83 21 0 chr20 34240522 34240657 -32427348 - AluSg SINE Alu -169 141 1 1204 138 4 77 chr20 34240522 34240763 -32427242 - AluSg SINE Alu -1 304 40 1309 278 77 15 chr20 34240775 34241065 -32426940 - L1MCc LINE L1 -3316 3625 3354 1822 167 0 7 chr20 34241065 34241371 -32426634 + AluJb SINE Alu 1 304 -8 1309 278 77 15 chr20 34241371 34241627 -32426378 - L1MCc LINE L1 -3587 3354 3045 1885 166 0 13 chr20 34241633 34241946 -32426059 - AluJb SINE Alu -3 309 1 198 103 0 0 chr20 34241953 34241982 -32426023 + (ATTG)n Simple_repeat Simple_repeat 2 30 0 2110 86 4 0 chr20 34241984 34242264 -32425741 - AluY SINE Alu -30 281 1 368 268 47 74 chr20 34242295 34242621 -32425384 - L1MCc LINE L1 -4900 1523 1190 2167 93 0 45 chr20 34242621 34242932 -32425073 - AluSx SINE Alu -15 297 1 368 268 47 74 chr20 34242932 34242943 -32425062 - L1MCc LINE L1 -5233 1190 1180 2471 56 0 0 chr20 34242943 34243245 -32424760 - AluY SINE Alu -9 302 1 368 268 47 74 chr20 34243245 34243367 -32424638 - L1MCc LINE L1 -5243 1180 1056 1796 154 7 23 chr20 34243367 34243666 -32424339 - AluSx SINE Alu -18 294 1 368 268 47 74 chr20 34243666 34243799 -32424206 - L1MCc LINE L1 -5367 1056 1336 2212 119 0 0 chr20 34243799 34244111 -32423894 - AluSx SINE Alu 0 312 1 368 268 47 74 chr20 34244111 34244195 -32423810 - L1MCc LINE L1 -5086 1337 1252 238 175 13 182 chr20 34244580 34244734 -32423271 - L1MCc LINE L1 -5939 992 865 182 250 0 0 chr20 34244734 34244770 -32423235 - L3 LINE CR1 -1221 356 321 223 281 70 0 chr20 34244861 34244918 -32423087 + MIR SINE MIR 7 67 -195 896 139 42 24 chr20 34244928 34245093 -32422912 + AluJo SINE Alu 10 177 -135 1616 184 13 29 chr20 34245093 34245402 -32422603 - AluJb SINE Alu -8 304 1 338 241 60 0 chr20 34245403 34245486 -32422519 - L1MA10 LINE L1 -64 6270 6183 * 3284 207 67 8 chr20 34245482 34246072 -32421933 - L1M4 LINE L1 -2911 3235 2580 2084 109 14 0 chr20 34246072 34246366 -32421639 - AluSx SINE Alu -14 298 1 3284 207 67 8 chr20 34246366 34246611 -32421394 - L1M4 LINE L1 -3566 2580 2351 487 275 63 14 chr20 34246613 34246755 -32421250 + L2 LINE L2 3163 3311 -2 2264 77 0 0 chr20 34246957 34247254 -32420751 - AluY SINE Alu -14 297 1 1942 100 3 63 chr20 34247278 34247597 -32420408 + AluSx SINE Alu 1 300 -12 2257 88 0 0 chr20 34247822 34248118 -32419887 + AluSg SINE Alu 1 296 -14 1810 168 0 10 chr20 34248122 34248420 -32419585 + AluJo SINE Alu 1 295 -17 551 310 91 15 chr20 34248465 34248491 -32419514 - L2 LINE L2 -425 2889 2866 2146 98 0 10 chr20 34248491 34248788 -32419217 + AluY SINE Alu 5 298 -13 551 310 91 15 chr20 34248788 34249035 -32418970 - L2 LINE L2 -448 2866 2595 2152 114 0 0 chr20 34249063 34249369 -32418636 - AluSg SINE Alu -4 306 1 2468 60 0 0 chr20 34249378 34249679 -32418326 - AluY SINE Alu -10 301 1 1039 150 30 0 chr20 34249710 34249877 -32418128 + AluJb SINE Alu 127 298 -14 354 327 98 0 chr20 34250441 34250594 -32417411 - L3 LINE CR1 -73 1504 1337 462 265 117 65 chr20 34250701 34251025 -32416980 + L1ME4a LINE L1 5506 5846 -275 189 0 0 0 chr20 34251025 34251046 -32416959 + (TCTCCC)n Simple_repeat Simple_repeat 5 25 0 5938 73 18 22 chr20 34251049 34252168 -32415837 + SVA Other Other 1 866 -520 6465 63 14 42 chr20 34252185 34253166 -32414839 + SVA Other Other 433 1386 0 185 0 40 0 chr20 34253179 34253204 -32414801 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 774 174 28 28 chr20 34253205 34253383 -32414622 + L1MC4a LINE L1 7011 7188 -620 2177 105 0 0 chr20 34253408 34253703 -32414302 + AluSx SINE Alu 9 303 -9 1406 186 47 90 chr20 34253704 34254150 -32413855 + L1MD3 LINE L1 7569 7995 0 5615 102 6 39 chr20 34254325 34255169 -32412836 - L1PA15 LINE L1 -26 6139 5324 1823 141 0 56 chr20 34255181 34255487 -32412518 - AluJb SINE Alu -23 289 1 1740 126 8 0 chr20 34255494 34255756 -32412249 - AluSx SINE Alu -13 299 36 1667 172 10 3 chr20 34256005 34256302 -32411703 - AluJo SINE Alu -13 299 1 1382 163 4 4 chr20 34256364 34256603 -32411402 + AluJo SINE Alu 73 311 -1 1234 163 28 9 chr20 34257252 34257467 -32410538 - AluJo SINE Alu -10 302 84 1638 119 109 25 chr20 34257514 34257799 -32410206 + AluSg SINE Alu 1 309 -1 1777 138 38 3 chr20 34257805 34258094 -32409911 + AluJo SINE Alu 1 299 -13 1998 111 7 29 chr20 34258121 34258290 -32409715 - AluSg SINE Alu -10 300 140 2751 10 0 0 chr20 34258290 34258600 -32409405 - AluY SINE Alu -1 310 1 1998 111 7 29 chr20 34258600 34258737 -32409268 - AluSg SINE Alu -170 140 1 1881 138 0 0 chr20 34259024 34259293 -32408712 + AluSx SINE Alu 24 292 -20 200 57 0 29 chr20 34259608 34259643 -32408362 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1352 149 57 53 chr20 34259646 34259782 -32408223 - AluJo SINE Alu -30 282 148 2579 42 0 6 chr20 34259782 34260095 -32407910 - AluY SINE Alu 0 311 1 1352 149 57 53 chr20 34260095 34260239 -32407766 - AluJo SINE Alu -164 148 1 4340 203 55 37 chr20 34260387 34261278 -32406727 + L1MC4a LINE L1 6639 7513 -295 2241 92 3 0 chr20 34261278 34261581 -32406424 + AluSx SINE Alu 1 304 -8 2054 112 3 0 chr20 34261586 34261906 -32406099 + AluY SINE Alu 1 311 0 4340 203 55 37 chr20 34261906 34261967 -32406038 + L1MC4a LINE L1 7516 7574 -234 1584 168 9 22 chr20 34261967 34262282 -32405723 - AluJo SINE Alu 0 312 2 4340 203 55 37 chr20 34262282 34262472 -32405533 + L1MC4a LINE L1 7574 7808 0 2161 124 0 0 chr20 34262487 34262794 -32405211 + AluSx SINE Alu 6 312 0 583 216 95 26 chr20 34262802 34262992 -32405013 + L1MC5 LINE L1 7323 7525 -436 347 243 110 59 chr20 34263098 34263234 -32404771 + L1ME3A LINE L1 5962 6104 -66 2002 119 7 23 chr20 34263290 34263592 -32404413 - AluSx SINE Alu -15 297 1 1935 134 0 13 chr20 34263642 34263940 -32404065 - AluJb SINE Alu -17 295 2 649 234 76 29 chr20 34264176 34264347 -32403658 + MIR SINE MIR 74 252 -10 2208 93 10 3 chr20 34264349 34264659 -32403346 - AluSp SINE Alu -1 312 1 1986 117 7 13 chr20 34264736 34265034 -32402971 + AluSq SINE Alu 1 296 -17 1884 125 0 26 chr20 34265034 34265338 -32402667 - AluJb SINE Alu -16 296 1 593 310 198 9 chr20 34265434 34265666 -32402339 + MLT1K LTR MaLR 11 286 -302 1729 161 10 16 chr20 34265668 34265978 -32402027 + AluJo SINE Alu 1 308 -4 2520 50 0 0 chr20 34266070 34266371 -32401634 + AluY SINE Alu 1 301 -10 259 317 62 55 chr20 34266823 34266870 -32401135 - MIR SINE MIR -116 146 101 2243 99 0 0 chr20 34266870 34267172 -32400833 + AluSg SINE Alu 1 302 -8 2045 117 3 0 chr20 34267176 34267467 -32400538 + AluSq SINE Alu 6 297 -16 259 317 62 55 chr20 34267467 34267559 -32400446 - MIR SINE MIR -163 99 1 237 262 233 0 chr20 34267639 34267742 -32400263 - L2 LINE L2 -3 3310 3184 1658 128 19 75 chr20 34267742 34268062 -32399943 + AluJb SINE Alu 1 302 -10 2203 106 3 0 chr20 34268064 34268367 -32399638 + AluSp SINE Alu 1 304 -9 457 261 37 22 chr20 34268596 34268730 -32399275 + MIR SINE MIR 68 203 -59 813 124 31 0 chr20 34268829 34268958 -32399047 + FLAM_C SINE Alu 1 133 0 628 191 92 13 chr20 34268983 34269135 -32398870 + L1ME3A LINE L1 6007 6170 0 200 254 0 16 chr20 34269859 34269922 -32398083 + C-rich Low_complexity Low_complexity 5 66 0 21 0 0 0 chr20 34270190 34270211 -32397794 + GC_rich Low_complexity Low_complexity 1 21 0 1813 64 112 54 chr20 34270562 34270857 -32397148 - AluSx SINE Alu 0 312 1 1179 79 127 11 chr20 34270870 34271059 -32396946 - AluJb SINE Alu -18 294 84 240 309 0 15 chr20 34271104 34271172 -32396833 - L2 LINE L2 -4 3309 3243 2159 89 0 16 chr20 34271286 34271590 -32396415 - AluSp SINE Alu -14 299 1 1297 214 80 8 chr20 34271597 34271948 -32396057 - MER63B DNA MER1_type -55 381 6 2129 129 0 0 chr20 34272040 34272351 -32395654 + AluSx SINE Alu 1 311 -1 496 266 206 4 chr20 34272393 34272731 -32395274 - L2 LINE L2 -233 3080 2690 243 305 20 66 chr20 34272712 34272863 -32395142 - L2 LINE L2 -17 3296 3153 * 420 19 0 0 chr20 34272874 34272927 -32395078 + AluY SINE Alu 247 299 -12 2003 145 3 0 chr20 34272963 34273274 -32394731 + AluJb SINE Alu 1 312 0 2249 90 6 6 chr20 34273276 34273588 -32394417 + AluSx SINE Alu 1 312 0 312 287 33 41 chr20 34273713 34273835 -32394170 - MIR SINE MIR -18 244 124 266 314 89 16 chr20 34273871 34273995 -32394010 + MIR SINE MIR 130 262 0 1020 183 5 5 chr20 34274160 34274357 -32393648 + L1MB8 LINE L1 5004 5200 -946 2015 119 7 0 chr20 34274359 34274654 -32393351 + AluSx SINE Alu 2 298 -14 2050 123 0 13 chr20 34274660 34274969 -32393036 + AluSg SINE Alu 1 305 -5 820 115 0 8 chr20 34274976 34275098 -32392907 + AluJb SINE Alu 13 133 -179 1695 157 6 48 chr20 34275103 34275416 -32392589 + AluJb SINE Alu 1 300 -12 3839 156 25 43 chr20 34275417 34275704 -32392301 + L1MB8 LINE L1 5207 5498 -680 2124 115 0 3 chr20 34275704 34276009 -32391996 + AluSx SINE Alu 1 304 -8 3839 156 25 43 chr20 34276009 34276445 -32391560 + L1MB8 LINE L1 5498 5917 -261 1585 170 7 20 chr20 34276445 34276576 -32391429 + AluJb SINE Alu 5 136 -176 2148 115 3 3 chr20 34276576 34276888 -32391117 + AluSx SINE Alu 1 312 0 1585 170 7 20 chr20 34276888 34277062 -32390943 + AluJb SINE Alu 136 306 -6 3839 156 25 43 chr20 34277062 34277178 -32390827 + L1MB8 LINE L1 5917 6034 -144 2047 108 3 14 chr20 34277178 34277475 -32390530 + AluSp SINE Alu 1 294 -19 800 105 0 45 chr20 34277509 34277642 -32390363 - FLAM_C SINE Alu 0 143 17 261 266 170 32 chr20 34277654 34277748 -32390257 + MER5A DNA MER1_type 59 165 -24 * 388 295 19 38 chr20 34277675 34277780 -32390225 - MER5A DNA MER1_type -83 106 4 994 201 48 10 chr20 34277840 34278079 -32389926 - MIR SINE MIR 0 262 11 501 80 0 0 chr20 34278097 34278172 -32389833 + (GGTTG)n Simple_repeat Simple_repeat 4 78 0 823 199 7 0 chr20 34278574 34278720 -32389285 + MER7C DNA MER2_type 1 147 -455 * 1274 120 0 10 chr20 34278688 34278880 -32389125 + MER7A DNA MER2_type 68 255 -91 423 309 122 43 chr20 34278892 34279406 -32388599 - L2 LINE L2 -69 3244 2688 2269 97 6 0 chr20 34279406 34279717 -32388288 + AluSq SINE Alu 1 313 0 1720 136 0 65 chr20 34279735 34280045 -32387960 + AluJb SINE Alu 1 290 -22 348 280 20 10 chr20 34280235 34280335 -32387670 - MIR SINE MIR -64 144 44 2319 72 3 0 chr20 34280814 34281107 -32386898 + AluSc SINE Alu 1 294 -15 273 98 0 0 chr20 34281126 34281167 -32386838 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 204 295 16 0 chr20 34281174 34281235 -32386770 + L2 LINE L2 2724 2785 -529 685 89 0 0 chr20 34281238 34281328 -32386677 + AluSx SINE Alu 2 91 -222 303 304 45 9 chr20 34281426 34281538 -32386467 + L1ME LINE L1 5537 5652 -469 1440 117 10 0 chr20 34281577 34281783 -32386222 + AluSx SINE Alu 93 300 -12 1379 240 27 67 chr20 34282130 34282575 -32385430 - L1MEd LINE L1 -5447 672 246 320 208 170 19 chr20 34282577 34282683 -32385322 - L1MEd LINE L1 -5996 123 2 361 333 65 7 chr20 34282697 34282835 -32385170 + L2 LINE L2 3117 3262 -10 284 292 0 0 chr20 34282840 34282905 -32385100 - L3 LINE CR1 -109 1468 1404 555 285 122 53 chr20 34283118 34283359 -32384646 + L1MC4a LINE L1 5537 5760 -2048 1918 143 3 7 chr20 34283359 34283660 -32384345 - AluJb SINE Alu -12 300 1 2153 112 0 0 chr20 34283664 34283968 -32384037 - AluSq SINE Alu -8 305 2 555 285 122 53 chr20 34283968 34284040 -32383965 + L1MC4a LINE L1 5762 5877 -1931 621 230 94 74 chr20 34284090 34284137 -32383868 + L1MC4a LINE L1 5543 5588 -2220 2205 100 3 0 chr20 34284137 34284436 -32383569 - AluSx SINE Alu -12 300 1 621 230 94 74 chr20 34284436 34284740 -32383265 + L1MC4a LINE L1 5588 5901 -1907 1919 138 0 22 chr20 34284778 34285089 -32382916 - AluJb SINE Alu -4 308 5 2122 109 0 0 chr20 34285474 34285776 -32382229 - AluSc SINE Alu -7 302 1 252 0 0 0 chr20 34285776 34285804 -32382201 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1436 186 44 24 chr20 34285877 34286172 -32381833 - AluJb SINE Alu -11 301 1 2068 107 0 23 chr20 34286211 34286511 -32381494 - AluSx SINE Alu -19 293 1 2396 54 3 0 chr20 34286908 34287204 -32380801 - AluY SINE Alu -14 297 1 1786 154 0 23 chr20 34287558 34287863 -32380142 + AluJo SINE Alu 1 298 -14 1944 101 63 3 chr20 34287863 34288150 -32379855 + AluY SINE Alu 1 304 -7 673 224 65 12 chr20 34288153 34288323 -32379682 + MIR SINE MIR 28 206 -56 771 109 0 25 chr20 34288323 34288442 -32379563 + FLAM_A SINE Alu 20 135 -7 1444 163 50 7 chr20 34288452 34288729 -32379276 + AluSx SINE Alu 23 311 -1 2382 36 10 20 chr20 34288731 34289035 -32378970 + AluY SINE Alu 1 301 -10 1583 153 60 4 chr20 34289313 34289594 -32378411 + AluJo SINE Alu 1 297 -15 689 160 0 0 chr20 34289600 34289706 -32378299 + FLAM_C SINE Alu 2 107 -36 570 98 0 0 chr20 34289706 34289788 -32378217 + (GA)n Simple_repeat Simple_repeat 1 82 0 742 175 0 29 chr20 34289815 34289952 -32378053 - AluJo SINE Alu -166 146 14 1315 255 40 40 chr20 34289956 34290329 -32377676 - MLT1E LTR MaLR 0 593 221 379 305 0 9 chr20 34290397 34290502 -32377503 + MIR SINE MIR 70 173 -89 2174 112 23 10 chr20 34290567 34290871 -32377134 - AluSx SINE Alu -4 308 1 842 92 46 23 chr20 34291491 34291621 -32376384 + FLAM_C SINE Alu 1 133 0 351 294 53 7 chr20 34291894 34292040 -32375965 - MIR3 SINE MIR -27 181 26 306 0 0 0 chr20 34292040 34292074 -32375931 + (CA)n Simple_repeat Simple_repeat 2 35 0 2037 125 44 0 chr20 34292127 34292423 -32375582 - AluSx SINE Alu -1 311 3 257 280 24 7 chr20 34292545 34292634 -32375371 + MIR SINE MIR 105 195 -13 2294 94 0 13 chr20 34292864 34293171 -32374834 - AluSx SINE Alu -9 303 1 1532 179 107 0 chr20 34293429 34293709 -32374296 - AluSx SINE Alu -2 310 1 430 219 0 88 chr20 34293801 34293915 -32374090 + MIR3 SINE MIR 81 184 -24 2701 46 0 0 chr20 34294221 34294527 -32373478 - AluY SINE Alu -5 306 1 360 295 120 73 chr20 34294574 34294814 -32373191 - L2 LINE L2 -25 3247 3020 1573 184 50 4 chr20 34294814 34295091 -32372914 - AluJo SINE Alu -22 290 1 360 295 120 73 chr20 34295091 34295434 -32372571 - L2 LINE L2 -252 3020 2637 2285 71 7 3 chr20 34295631 34295925 -32372080 + AluY SINE Alu 2 296 -15 403 214 214 8 chr20 34296159 34296290 -32371715 - MIR3 SINE MIR -7 201 44 675 217 116 16 chr20 34296338 34296555 -32371450 + MIR SINE MIR 15 257 -5 218 31 0 31 chr20 34297284 34297316 -32370689 + (GGGGA)n Simple_repeat Simple_repeat 2 32 0 24 0 0 0 chr20 34297693 34297717 -32370288 + GC_rich Low_complexity Low_complexity 1 24 0 229 310 28 0 chr20 34298211 34298282 -32369723 - MIR SINE MIR -62 146 74 269 293 50 36 chr20 34299015 34299155 -32368850 + MIR3 SINE MIR 8 149 -59 212 211 0 96 chr20 34299154 34299206 -32368799 + L2 LINE L2 3218 3264 -8 * 248 305 79 55 chr20 34299349 34299513 -32368492 + MIR3 SINE MIR 30 197 -11 966 241 36 5 chr20 34300660 34300884 -32367121 + MIR SINE MIR 2 232 -30 1684 112 143 0 chr20 34300900 34301158 -32366847 - AluSx SINE Alu -17 295 1 243 316 40 0 chr20 34301202 34301278 -32366727 + L2 LINE L2 2976 3054 -218 361 157 22 90 chr20 34301321 34301410 -32366595 - MIR SINE MIR 0 262 180 571 276 20 0 chr20 34301491 34301643 -32366362 - MIR SINE MIR -64 198 44 225 0 0 0 chr20 34302258 34302283 -32365722 + (TG)n Simple_repeat Simple_repeat 1 25 0 33 43 0 0 chr20 34302354 34302401 -32365604 + GC_rich Low_complexity Low_complexity 1 47 0 26 30 0 0 chr20 34303163 34303196 -32364809 + GC_rich Low_complexity Low_complexity 1 33 0 29 47 0 0 chr20 34306486 34306529 -32361476 + AT_rich Low_complexity Low_complexity 1 43 0 2303 76 24 0 chr20 34307143 34307432 -32360573 - AluSp SINE Alu -17 296 1 2163 109 13 10 chr20 34309032 34309334 -32358671 + AluSx SINE Alu 1 303 -9 1684 150 19 64 chr20 34309566 34309880 -32358125 + AluJo SINE Alu 1 300 -12 2310 117 3 0 chr20 34310266 34310573 -32357432 + AluSp SINE Alu 1 308 -5 233 291 0 25 chr20 34311376 34311455 -32356550 + L2 LINE L2 2329 2405 -909 2055 134 7 0 chr20 34311613 34311903 -32356102 - AluSx SINE Alu -20 292 1 2059 128 7 0 chr20 34312446 34312736 -32355269 + AluSx SINE Alu 1 292 -20 329 118 0 0 chr20 34312822 34312873 -32355132 + Alu SINE Alu 245 295 -6 333 176 9 148 chr20 34314086 34314194 -32353811 + MER21B LTR ERV1 1 83 -780 488 128 0 0 chr20 34314225 34314303 -32353702 + MER21B LTR ERV1 239 316 -547 261 0 0 0 chr20 34314336 34314365 -32353640 + (A)n Simple_repeat Simple_repeat 1 29 0 1901 166 38 119 chr20 34314373 34314547 -32353458 + MER21B LTR ERV1 304 491 -372 1965 130 92 25 chr20 34314547 34314862 -32353143 - MER1B DNA MER1_type -1 336 1 1901 166 38 119 chr20 34314862 34314875 -32353130 + MER21B LTR ERV1 491 503 -360 2137 147 3 0 chr20 34314875 34315181 -32352824 + AluJo SINE Alu 5 311 -1 1901 166 38 119 chr20 34315181 34315196 -32352809 + MER21B LTR ERV1 503 518 -345 2344 120 0 0 chr20 34315196 34315526 -32352479 + AluSx SINE Alu 1 312 0 1719 157 8 8 chr20 34315534 34315801 -32352204 + AluJo SINE Alu 40 306 -6 1898 134 0 74 chr20 34315802 34316138 -32351867 + AluSx SINE Alu 2 312 0 1901 166 38 119 chr20 34316138 34316475 -32351530 + MER21B LTR ERV1 524 811 -52 371 336 84 62 chr20 34317690 34317889 -32350116 + L2 LINE L2 2986 3194 -78 2393 101 0 0 chr20 34317889 34318186 -32349819 - AluSx SINE Alu -15 297 1 371 336 84 62 chr20 34318186 34318260 -32349745 + L2 LINE L2 3194 3265 -7 380 295 16 16 chr20 34318261 34318383 -32349622 - L2 LINE L2 -2 3311 3190 213 332 129 28 chr20 34318501 34318718 -32349287 - L2 LINE L2 -338 2976 2738 685 310 164 26 chr20 34318718 34319256 -32348749 - L2 LINE L2 -726 2588 1977 601 284 202 15 chr20 34319270 34319601 -32348404 - L2 LINE L2 -1715 1599 1207 2300 108 3 0 chr20 34319601 34319897 -32348108 + AluSx SINE Alu 1 297 -15 1087 170 12 0 chr20 34319908 34320073 -32347932 + FRAM SINE Alu 1 167 -9 2211 128 0 3 chr20 34320809 34321122 -32346883 - AluSx SINE Alu 0 312 1 226 308 11 11 chr20 34321405 34321496 -32346509 + L1ME4a LINE L1 5471 5561 -560 1150 177 79 0 chr20 34321496 34321699 -32346306 + MER20 DNA MER1_type 1 219 0 556 274 145 13 chr20 34321702 34322020 -32345985 + L1ME4a LINE L1 5612 5971 -150 2272 118 0 0 chr20 34322043 34322348 -32345657 - AluSx SINE Alu -7 305 1 343 268 44 98 chr20 34322369 34322552 -32345453 + L1ME4a LINE L1 5945 6117 -4 360 0 0 0 chr20 34322632 34322672 -32345333 + (CAAAA)n Simple_repeat Simple_repeat 4 43 0 210 306 22 142 chr20 34322681 34322864 -32345141 + L2 LINE L2 3022 3182 -90 1737 143 9 90 chr20 34323149 34323484 -32344521 - AluJo SINE Alu -4 308 1 1937 150 27 7 chr20 34323810 34324104 -32343901 - AluJb SINE Alu -12 300 1 2340 113 0 0 chr20 34324115 34324417 -32343588 - AluSx SINE Alu -10 302 1 762 242 56 60 chr20 34324464 34324716 -32343289 + MIR SINE MIR 10 260 -2 1989 127 33 0 chr20 34324851 34325126 -32342879 + AluSx SINE Alu 7 290 -22 232 255 106 32 chr20 34326351 34326445 -32341560 + L2 LINE L2 3005 3105 -167 707 306 60 0 chr20 34326531 34326747 -32341258 + MIR SINE MIR 34 262 0 967 112 0 0 chr20 34326842 34326976 -32341029 + AluSc SINE Alu 174 307 -2 2063 114 35 0 chr20 34327172 34327461 -32340544 - AluSx SINE Alu -13 299 1 1541 175 61 11 chr20 34327463 34327743 -32340262 - AluJb SINE Alu -18 294 1 2153 104 17 3 chr20 34327746 34328045 -32339960 - AluSp SINE Alu -10 303 1 2397 94 7 0 chr20 34328461 34328770 -32339235 + AluY SINE Alu 1 311 0 220 300 69 46 chr20 34330258 34330388 -32337617 + L2 LINE L2 3181 3313 0 251 323 0 0 chr20 34330398 34330460 -32337545 - L2 LINE L2 0 3272 3211 1869 173 0 13 chr20 34330994 34331300 -32336705 - AluJb SINE Alu -10 302 1 385 329 63 29 chr20 34331767 34331974 -32336031 - MIR SINE MIR -29 233 20 678 299 88 13 chr20 34332320 34332550 -32335455 - MIR SINE MIR 0 262 16 218 328 17 0 chr20 34332768 34332826 -32335179 + MIR SINE MIR 88 146 -62 2258 106 3 0 chr20 34332967 34333260 -32334745 - AluSx SINE Alu -18 294 1 213 39 0 0 chr20 34336258 34336284 -32331721 + (CTG)n Simple_repeat Simple_repeat 1 26 0 306 191 0 127 chr20 34338214 34338340 -32329665 - MER102a DNA MER1_type 0 330 221 1892 144 41 17 chr20 34339350 34339642 -32328363 - AluJb SINE Alu -13 299 1 198 0 0 0 chr20 34340028 34340050 -32327955 + (A)n Simple_repeat Simple_repeat 1 22 0 517 269 37 8 chr20 34340971 34341105 -32326900 - MIR3 SINE MIR -11 197 60 26 0 0 0 chr20 34341287 34341313 -32326692 + AT_rich Low_complexity Low_complexity 1 26 0 976 204 159 28 chr20 34342082 34342434 -32325571 + L1MC5 LINE L1 7516 7913 -48 895 164 0 14 chr20 34343973 34344112 -32323893 + AluSc SINE Alu 144 282 -27 180 0 0 0 chr20 34344112 34344132 -32323873 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 2838 19 0 0 chr20 34344185 34344496 -32323509 + AluYb8 SINE Alu 1 311 -7 1848 120 79 10 chr20 34344961 34345253 -32322752 - AluSx SINE Alu 0 312 1 577 296 71 16 chr20 34345471 34345724 -32322281 - L2 LINE L2 0 3313 3047 1888 121 54 3 chr20 34345743 34346041 -32321964 + AluSq SINE Alu 1 313 0 2201 107 0 13 chr20 34346145 34346443 -32321562 - AluSx SINE Alu -18 294 1 2298 101 3 3 chr20 34346477 34346783 -32321222 + AluSg SINE Alu 2 307 -3 856 209 105 38 chr20 34347381 34347591 -32320414 + MER58A DNA MER1_type 1 224 0 2400 93 0 3 chr20 34348820 34349133 -32318872 - AluSx SINE Alu 0 312 1 507 123 0 0 chr20 34350989 34351070 -32316935 + (CTG)n Simple_repeat Simple_repeat 1 81 0 575 257 47 0 chr20 34351492 34351640 -32316365 + MER103 DNA DNA 12 166 0 1582 140 29 76 chr20 34352122 34352436 -32315569 - AluJo SINE Alu -13 299 1 21 0 0 0 chr20 34352463 34352484 -32315521 + AT_rich Low_complexity Low_complexity 1 21 0 500 290 180 26 chr20 34352645 34353028 -32314977 - L1MC4a LINE L1 -1861 5947 5506 1927 150 3 3 chr20 34353092 34353385 -32314620 + AluJo SINE Alu 1 293 -19 1358 284 106 47 chr20 34353560 34354035 -32313970 - L1MC4a LINE L1 -2459 3687 3241 1588 94 0 5 chr20 34354035 34354238 -32313767 + AluSq SINE Alu 1 202 -111 1358 284 106 47 chr20 34354238 34354748 -32313257 - L1MC4a LINE L1 -2905 3241 2762 2309 109 0 0 chr20 34354748 34355050 -32312955 - AluSg SINE Alu -8 302 1 1358 284 106 47 chr20 34355050 34355523 -32312482 - L1MC4a LINE L1 -3384 2762 2143 992 257 97 56 chr20 34355829 34356608 -32311397 - L1MEd LINE L1 -745 1745 830 237 301 11 32 chr20 34356629 34356722 -32311283 - L1MEd LINE L1 -5408 711 621 489 298 140 14 chr20 34356866 34357151 -32310854 - L1MEd LINE L1 -5677 442 122 2434 77 0 0 chr20 34357183 34357483 -32310522 - AluY SINE Alu -11 300 1 2129 98 31 0 chr20 34357508 34357795 -32310210 + AluSx SINE Alu 1 296 -16 1923 142 6 29 chr20 34357928 34358239 -32309766 + AluSx SINE Alu 1 304 -8 2068 72 76 34 chr20 34358267 34358558 -32309447 + AluY SINE Alu 1 303 -8 244 316 44 44 chr20 34358566 34358680 -32309325 + L3 LINE CR1 1420 1533 -44 1321 160 9 14 chr20 34358684 34358896 -32309109 + MER20 DNA MER1_type 5 215 -4 1134 135 65 25 chr20 34359426 34359550 -32308455 + AluJb SINE Alu 1 137 -175 183 42 0 0 chr20 34359550 34359574 -32308431 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1134 135 65 25 chr20 34359574 34359649 -32308356 + AluJb SINE Alu 137 208 -104 217 296 0 0 chr20 34359875 34359919 -32308086 - MIR SINE MIR -140 68 25 294 299 84 0 chr20 34360242 34360349 -32307656 - MIR SINE MIR -99 163 48 2250 107 3 0 chr20 34360393 34360692 -32307313 - AluSx SINE Alu -12 300 1 330 254 132 35 chr20 34360879 34360993 -32307012 + MIR SINE MIR 16 140 -68 282 324 108 0 chr20 34361225 34361336 -32306669 + L2 LINE L2 3143 3265 -7 197 33 33 0 chr20 34361987 34362017 -32305988 + (TG)n Simple_repeat Simple_repeat 2 32 0 896 191 0 12 chr20 34362293 34362455 -32305550 - FRAM SINE Alu -18 158 1 2383 91 0 0 chr20 34362464 34362760 -32305245 - AluSx SINE Alu -16 296 1 2167 89 46 0 chr20 34363141 34363421 -32304584 - AluSc SINE Alu -16 293 1 588 270 35 77 chr20 34363663 34363729 -32304276 + L2 LINE L2 2712 2779 -534 2228 104 3 0 chr20 34363729 34364026 -32303979 - AluSx SINE Alu -14 298 1 588 270 35 77 chr20 34364026 34364075 -32303930 + L2 LINE L2 2779 2829 -484 1201 175 86 60 chr20 34364075 34364226 -32303779 - MER33 DNA MER1_type -2262 323 177 1753 144 0 56 chr20 34364226 34364531 -32303474 - AluJo SINE Alu -24 288 1 1201 175 86 60 chr20 34364531 34364693 -32303312 - MER33 DNA MER1_type -2408 177 2 588 270 35 77 chr20 34364693 34364943 -32303062 + L2 LINE L2 2829 3067 -246 317 189 32 147 chr20 34365074 34365139 -32302866 - MER94 DNA DNA -41 93 41 1679 171 49 11 chr20 34365139 34365425 -32302580 + AluJb SINE Alu 1 297 -15 317 189 32 147 chr20 34365425 34365454 -32302551 - MER94 DNA DNA -93 41 10 232 273 0 18 chr20 34365480 34365535 -32302470 + L2 LINE L2 3257 3310 -3 1070 216 9 9 chr20 34366135 34366353 -32301652 + MER58A DNA MER1_type 2 219 -5 650 137 0 0 chr20 34366545 34366640 -32301365 - AluSp/q SINE Alu -7 306 212 2023 117 4 0 chr20 34366646 34366920 -32301085 - AluSx SINE Alu -37 275 1 338 305 101 73 chr20 34368041 34368402 -32299603 - L2 LINE L2 -181 3091 2725 258 81 0 0 chr20 34368402 34368439 -32299566 + (TG)n Simple_repeat Simple_repeat 1 37 0 338 305 101 73 chr20 34368439 34368501 -32299504 - L2 LINE L2 -547 2725 2666 2115 96 68 0 chr20 34368507 34368799 -32299206 + AluSx SINE Alu 1 312 0 720 211 16 0 chr20 34368926 34369054 -32298951 + FLAM_A SINE Alu 1 130 -3 562 318 61 0 chr20 34369665 34369863 -32298142 + MIR SINE MIR 21 230 -32 2262 104 0 0 chr20 34369946 34370235 -32297770 + AluSg SINE Alu 14 302 -8 3799 153 41 83 chr20 34370242 34370421 -32297584 + L1MB3 LINE L1 5342 5527 -656 2174 105 0 29 chr20 34370421 34370727 -32297278 + AluSx SINE Alu 2 298 -14 3799 153 41 83 chr20 34370727 34371020 -32296985 + L1MB3 LINE L1 5527 5831 -352 2190 86 14 0 chr20 34371020 34371298 -32296707 - AluSc SINE Alu -27 282 1 3799 153 41 83 chr20 34371298 34371528 -32296477 + L1MB3 LINE L1 5831 6069 -114 2434 78 0 0 chr20 34371528 34371822 -32296183 - AluSc SINE Alu -15 294 1 3799 153 41 83 chr20 34371822 34371856 -32296149 + L1MB3 LINE L1 6069 6103 -80 1908 49 0 4 chr20 34371856 34372081 -32295924 + AluY SINE Alu 84 307 -4 3799 153 41 83 chr20 34372081 34372218 -32295787 + L1MB3 LINE L1 6103 6181 -2 2008 152 0 10 chr20 34372325 34372635 -32295370 + AluJb SINE Alu 1 307 -5 496 269 90 19 chr20 34372976 34373132 -32294873 - MIR3 SINE MIR -9 199 33 2189 102 27 0 chr20 34373448 34373742 -32294263 - AluSx SINE Alu -6 306 5 1961 164 0 3 chr20 34373745 34374050 -32293955 - AluJo SINE Alu -8 304 1 717 268 102 75 chr20 34374467 34374799 -32293206 - MER102b DNA MER1_type 0 341 1 349 267 30 0 chr20 34374841 34374942 -32293063 - MIR3 SINE MIR 0 208 105 28 48 0 0 chr20 34375576 34375618 -32292387 + AT_rich Low_complexity Low_complexity 1 42 0 2116 120 3 3 chr20 34376096 34376388 -32291617 + AluSx SINE Alu 1 292 -20 189 0 0 0 chr20 34376719 34376740 -32291265 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1817 144 4 4 chr20 34376740 34377010 -32290995 - AluSx SINE Alu -32 280 11 1829 169 20 10 chr20 34377320 34377622 -32290383 - AluJb SINE Alu -7 305 1 1373 188 8 4 chr20 34377643 34377893 -32290112 + AluJo SINE Alu 49 299 -13 2323 115 0 0 chr20 34377895 34378208 -32289797 + AluSq SINE Alu 1 313 0 710 144 22 72 chr20 34378411 34378550 -32289455 + FLAM_C SINE Alu 2 133 0 4116 143 16 28 chr20 34379063 34379817 -32288188 - L1P LINE L1 -2630 3516 2772 2743 123 16 5 chr20 34379821 34380252 -32287753 + L1P LINE L1 4892 5327 -819 315 234 13 13 chr20 34380257 34380334 -32287671 + L2 LINE L2 2634 2710 -604 1744 189 0 10 chr20 34380338 34380639 -32287366 + AluJb SINE Alu 1 298 -14 1014 167 50 22 chr20 34380741 34380963 -32287042 - MER66B LTR ERV1 0 486 259 1719 150 4 4 chr20 34380964 34381224 -32286781 - AluSx SINE Alu -13 299 40 390 109 0 31 chr20 34381271 34381335 -32286670 - Alu SINE Alu -3 298 237 1029 73 0 0 chr20 34381336 34381460 -32286545 - AluSq/x SINE Alu -189 124 1 1609 162 11 8 chr20 34381460 34381725 -32286280 - MER66B LTR ERV1 -220 266 1 2077 73 23 0 chr20 34381780 34382063 -32285942 + AluSp SINE Alu 21 309 0 1520 178 0 64 chr20 34382587 34382901 -32285104 + AluJb SINE Alu 1 294 -18 891 119 8 15 chr20 34383049 34383183 -32284822 + AluSq/x SINE Alu 1 133 -180 2563 157 31 38 chr20 34383206 34383428 -32284577 + L1MB5 LINE L1 5688 5910 -264 2173 99 0 3 chr20 34383428 34383751 -32284254 - AluY SINE Alu 0 322 1 2147 111 0 3 chr20 34383759 34384047 -32283958 - AluSx SINE Alu -25 287 1 2563 157 31 38 chr20 34384047 34384292 -32283713 + L1MB5 LINE L1 5917 6162 -12 180 0 0 0 chr20 34385669 34385689 -32282316 + (CAA)n Simple_repeat Simple_repeat 2 21 0 2132 118 7 16 chr20 34385873 34386179 -32281826 - AluJb SINE Alu -9 303 1 914 193 0 0 chr20 34386578 34386728 -32281277 + FRAM SINE Alu 6 155 -21 1707 225 104 52 chr20 34386972 34387236 -32280769 + L1MC4a LINE L1 5314 5563 -2245 985 234 0 0 chr20 34387236 34387403 -32280602 + FAM SINE Alu 1 167 -8 1707 225 104 52 chr20 34387403 34387818 -32280187 + L1MC4a LINE L1 5563 6029 -1779 660 218 81 16 chr20 34387811 34388022 -32279983 + L1MC4 LINE L1 6779 7002 -806 * 1405 249 72 96 chr20 34388155 34389100 -32278905 + L1MC4 LINE L1 7099 8022 -20 2163 124 7 3 chr20 34389100 34389406 -32278599 - AluJo SINE Alu -5 307 1 1405 249 72 96 chr20 34389406 34389427 -32278578 + L1MC4 LINE L1 8022 8042 0 1547 183 0 11 chr20 34389435 34389697 -32278308 + AluJb SINE Alu 3 261 -51 802 173 82 121 chr20 34389702 34389933 -32278072 + AluJo SINE Alu 76 297 -15 242 231 94 51 chr20 34389938 34390055 -32277950 + L1MC4a LINE L1 6043 6164 -1644 14576 125 33 55 chr20 34390230 34390702 -32277303 + L1M1 LINE L1 603 1084 -6481 1914 127 0 22 chr20 34390702 34390977 -32277028 + AluSx SINE Alu 1 269 -43 14576 125 33 55 chr20 34390977 34394779 -32273226 + L1M1 LINE L1 1084 4905 -2660 1354 101 22 6 chr20 34394779 34394982 -32273023 + AluSc SINE Alu 99 304 0 14576 125 33 55 chr20 34394982 34395279 -32272726 + L1M1 LINE L1 4905 5207 -2358 1073 95 7 0 chr20 34395281 34395418 -32272587 + AluSq/x SINE Alu 1 138 -175 2294 98 0 3 chr20 34395418 34395715 -32272290 + AluSc SINE Alu 3 298 -11 27 29 0 0 chr20 34395818 34395852 -32272153 + AT_rich Low_complexity Low_complexity 1 34 0 1556 150 60 50 chr20 34395906 34396206 -32271799 - AluJb SINE Alu -8 304 2 2061 148 3 0 chr20 34396282 34396592 -32271413 + AluSx SINE Alu 1 311 -1 286 246 0 0 chr20 34396741 34396810 -32271195 + L1ME LINE L1 5637 5705 -416 1812 121 60 11 chr20 34396813 34397095 -32270910 + AluSx SINE Alu 4 299 -13 1238 172 23 28 chr20 34397104 34397152 -32270853 + AluJb SINE Alu 86 133 -179 2054 125 4 0 chr20 34397152 34397431 -32270574 + AluSx SINE Alu 1 280 -32 216 0 0 0 chr20 34397431 34397455 -32270550 + (TAAA)n Simple_repeat Simple_repeat 4 27 0 1238 172 23 28 chr20 34397455 34397620 -32270385 + AluJb SINE Alu 131 299 -13 33 0 0 0 chr20 34397737 34397770 -32270235 + AT_rich Low_complexity Low_complexity 1 33 0 5545 127 60 34 chr20 34397804 34398140 -32269865 - L1MA5 LINE L1 -6 6294 5968 1828 171 7 13 chr20 34398140 34398439 -32269566 - AluSx SINE Alu -15 297 1 5545 127 60 34 chr20 34398439 34398782 -32269223 - L1MA5 LINE L1 -332 5968 5635 2136 113 3 23 chr20 34398782 34399082 -32268923 - AluSg SINE Alu -16 294 1 5545 127 60 34 chr20 34399082 34400027 -32267978 - L1MA5 LINE L1 -665 5635 4628 1452 230 61 34 chr20 34400035 34400579 -32267426 + MLT1E LTR MaLR 1 588 -5 2434 84 0 0 chr20 34400622 34400921 -32267084 - AluY SINE Alu -12 299 1 459 147 0 112 chr20 34400921 34400964 -32267041 - FLAM_A SINE Alu -169 142 96 2251 109 3 0 chr20 34400964 34401267 -32266738 + AluSx SINE Alu 1 304 -8 459 147 0 112 chr20 34401267 34401339 -32266666 - FLAM_A SINE Alu -215 96 40 605 170 21 103 chr20 34401508 34401533 -32266472 + MER5B DNA MER1_type 1 26 -152 2349 93 3 0 chr20 34401533 34401834 -32266171 - AluSp SINE Alu -11 302 1 605 170 21 103 chr20 34401834 34402002 -32266003 + MER5B DNA MER1_type 26 178 0 2146 110 7 3 chr20 34402781 34403071 -32264934 + AluSx SINE Alu 1 291 -21 270 185 148 0 chr20 34403181 34403262 -32264743 + L1ME3A LINE L1 6068 6160 -10 2385 57 40 3 chr20 34403640 34403938 -32264067 - AluY SINE Alu 0 311 3 214 297 65 81 chr20 34404073 34404258 -32263747 + MIR3 SINE MIR 6 187 -21 315 0 0 0 chr20 34404298 34404333 -32263672 + (TA)n Simple_repeat Simple_repeat 1 35 0 2277 99 0 16 chr20 34405064 34405376 -32262629 + AluSc SINE Alu 1 307 -2 924 138 0 14 chr20 34405830 34405968 -32262037 + AluJo SINE Alu 1 136 -176 2049 129 3 16 chr20 34405969 34406278 -32261727 + AluSq SINE Alu 1 305 -8 2216 121 3 0 chr20 34406280 34406578 -32261427 + AluSq SINE Alu 1 299 -14 327 272 102 20 chr20 34406578 34406881 -32261124 + L1MC5 LINE L1 7603 8041 -1 378 273 173 37 chr20 34407022 34407145 -32260860 + L1ME4a LINE L1 5598 5703 -418 2099 127 0 43 chr20 34407145 34407469 -32260536 + AluSg SINE Alu 1 310 0 378 273 173 37 chr20 34407469 34407616 -32260389 + L1ME4a LINE L1 5703 5905 -216 2262 107 0 3 chr20 34407689 34407988 -32260017 - AluSx SINE Alu -14 298 1 1520 158 40 29 chr20 34408194 34408472 -32259533 + AluJo SINE Alu 1 281 -31 30 0 0 0 chr20 34408472 34408502 -32259503 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr20 34409284 34409307 -32258698 + AT_rich Low_complexity Low_complexity 1 23 0 1341 134 82 52 chr20 34409333 34409602 -32258403 + MLT1C LTR MaLR 1 277 -190 1259 138 0 0 chr20 34409610 34409784 -32258221 - AluSx SINE Alu -126 186 13 784 145 0 0 chr20 34409784 34409928 -32258077 + AluSg/x SINE Alu 167 310 0 2155 118 0 34 chr20 34409935 34410258 -32257747 + AluSx SINE Alu 1 312 0 455 294 18 15 chr20 34411081 34411297 -32256708 + MIR SINE MIR 5 251 -11 855 194 14 0 chr20 34411302 34411446 -32256559 + FRAM SINE Alu 1 142 -34 216 0 0 0 chr20 34411456 34411480 -32256525 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 23 33 0 0 chr20 34411526 34411556 -32256449 + AT_rich Low_complexity Low_complexity 1 30 0 429 285 222 50 chr20 34412368 34412589 -32255416 - Charlie8 DNA MER1_type -2158 259 1 687 194 147 0 chr20 34412825 34412995 -32255010 - MIR SINE MIR -4 258 64 437 239 22 14 chr20 34413026 34413164 -32254841 + L1M4 LINE L1 4873 5011 -1135 1672 136 77 4 chr20 34413211 34413484 -32254521 + AluJb SINE Alu 1 293 -19 346 207 39 149 chr20 34413498 34413585 -32254420 + L1M4 LINE L1 5122 5174 -972 2332 113 0 0 chr20 34413585 34413886 -32254119 + AluSx SINE Alu 1 301 -11 346 207 39 149 chr20 34413886 34414006 -32253999 + L1M4 LINE L1 5174 5306 -840 993 217 60 28 chr20 34414258 34414475 -32253530 - MER58A DNA MER1_type 0 224 1 2624 41 0 0 chr20 34414686 34414981 -32253024 - AluY SINE Alu -14 297 3 211 349 86 20 chr20 34415319 34415471 -32252534 + L2 LINE L2 2724 2885 -429 435 335 62 77 chr20 34415500 34415825 -32252180 + L2 LINE L2 2951 3270 -2 1732 210 63 9 chr20 34415859 34416288 -32251717 + Charlie4a DNA MER1_type 3 454 -54 945 98 0 0 chr20 34416332 34416454 -32251551 + AluJb SINE Alu 1 122 -190 231 36 0 0 chr20 34416457 34416485 -32251520 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 1507 141 85 35 chr20 34416797 34417080 -32250925 - AluJb SINE Alu -15 297 1 235 174 87 29 chr20 34417403 34417472 -32250533 + MIR SINE MIR 54 126 -82 329 240 153 89 chr20 34418209 34418522 -32249483 + L1M2 LINE L1 798 1130 -5719 21 36 0 0 chr20 34418572 34418600 -32249405 + GC_rich Low_complexity Low_complexity 1 28 0 233 222 42 0 chr20 34418631 34418703 -32249302 + (TCCG)n Simple_repeat Simple_repeat 1 75 0 242 89 44 0 chr20 34418764 34418809 -32249196 + GA-rich Low_complexity Low_complexity 1 47 0 279 236 160 9 chr20 34419033 34419139 -32248866 + MIR SINE MIR 111 232 -30 4326 83 29 68 chr20 34419418 34419620 -32248385 - L1MA3 LINE L1 0 6305 6097 2335 86 0 13 chr20 34419620 34419934 -32248071 - AluSg SINE Alu 0 310 1 4326 83 29 68 chr20 34419934 34420121 -32247884 - L1MA3 LINE L1 -208 6097 5904 2193 114 3 0 chr20 34420121 34420418 -32247587 + AluSx SINE Alu 1 298 -14 4326 83 29 68 chr20 34420418 34420759 -32247246 - L1MA3 LINE L1 -401 5904 5603 219 229 42 0 chr20 34420781 34420829 -32247176 + MIR SINE MIR 104 153 -55 720 335 116 25 chr20 34420972 34421118 -32246887 + L2 LINE L2 2605 2736 -536 1857 164 7 10 chr20 34421118 34421251 -32246754 + AluJb SINE Alu 1 133 -179 1848 159 3 16 chr20 34421251 34421560 -32246445 + AluJb SINE Alu 1 305 -7 1857 164 7 10 chr20 34421560 34421724 -32246281 + AluJb SINE Alu 133 297 -15 720 335 116 25 chr20 34421724 34421760 -32246245 + L2 LINE L2 2736 2767 -505 2546 41 3 0 chr20 34421760 34422055 -32245950 + AluY SINE Alu 1 296 -15 720 335 116 25 chr20 34422055 34422474 -32245531 + L2 LINE L2 2767 3261 -11 907 186 38 107 chr20 34422660 34422877 -32245128 - L1ME3 LINE L1 -6 6156 5962 2376 60 42 0 chr20 34422877 34423161 -32244844 - AluY SINE Alu -15 296 1 907 186 38 107 chr20 34423161 34423234 -32244771 - L1ME3 LINE L1 -200 5962 5886 1653 136 3 81 chr20 34423411 34423466 -32244539 + L1MB3 LINE L1 5270 5328 -846 1884 181 0 0 chr20 34423466 34423758 -32244247 + AluJo SINE Alu 1 292 -20 1653 136 3 81 chr20 34423758 34423909 -32244096 + L1MB3 LINE L1 5328 5489 -685 1982 143 0 3 chr20 34423909 34424202 -32243803 - AluSx SINE Alu -20 292 1 1653 136 3 81 chr20 34424202 34424291 -32243714 + L1MB3 LINE L1 5489 5538 -636 2220 114 7 0 chr20 34424291 34424598 -32243407 - AluSx SINE Alu -3 309 1 1653 136 3 81 chr20 34424598 34424664 -32243341 + L1MB3 LINE L1 5538 5608 -566 723 144 0 0 chr20 34424664 34424775 -32243230 + FLAM_A SINE Alu 16 126 -16 434 153 0 6 chr20 34424776 34424858 -32243147 + L1MB3 LINE L1 5598 5667 -501 987 207 5 45 chr20 34424864 34425086 -32242919 + AluJb SINE Alu 85 297 -15 3077 143 27 8 chr20 34425087 34425598 -32242407 + L1MB3 LINE L1 5653 6173 -10 339 235 0 102 chr20 34425836 34425934 -32242071 + MIR SINE MIR 1 88 -174 432 296 15 0 chr20 34426099 34426231 -32241774 + MIR SINE MIR 99 232 -30 230 278 0 0 chr20 34426675 34426729 -32241276 + CT-rich Low_complexity Low_complexity 1 54 0 2331 91 0 3 chr20 34427090 34427387 -32240618 - AluSq SINE Alu -17 296 1 394 184 58 11 chr20 34427593 34427680 -32240325 + MER91B DNA MER1_type 40 130 -60 253 280 40 0 chr20 34427693 34427768 -32240237 + MER91B DNA MER1_type 86 163 -27 1827 168 0 13 chr20 34427777 34428081 -32239924 + AluJb SINE Alu 1 300 -12 1660 195 174 66 chr20 34428274 34428575 -32239430 - L1ME3A LINE L1 -1 6169 5902 2251 120 0 0 chr20 34428575 34428875 -32239130 - AluJb SINE Alu -12 300 1 1660 195 174 66 chr20 34428875 34428950 -32239055 - L1ME3A LINE L1 -268 5902 5837 2071 112 0 14 chr20 34428950 34429266 -32238739 - AluSx SINE Alu 0 312 1 2444 80 0 3 chr20 34429271 34429570 -32238435 - AluSp SINE Alu -13 300 3 1660 195 174 66 chr20 34429570 34429718 -32238287 - L1ME3A LINE L1 -336 5834 5579 2270 122 0 0 chr20 34429750 34430061 -32237944 + AluSq SINE Alu 1 311 -2 3297 165 31 45 chr20 34430085 34430145 -32237860 - L1MB8 LINE L1 -6 6172 6113 1719 190 3 0 chr20 34430145 34430445 -32237560 + AluJb SINE Alu 1 301 -11 3297 165 31 45 chr20 34430445 34431093 -32236912 - L1MB8 LINE L1 -65 6113 5474 847 144 0 23 chr20 34431111 34431243 -32236762 + FLAM_C SINE Alu 7 135 -8 8029 200 54 34 chr20 34431278 34431410 -32236595 - L1MB8 LINE L1 -707 5473 5345 2089 146 0 0 chr20 34431410 34431705 -32236300 + AluJb SINE Alu 3 297 -15 1805 159 0 7 chr20 34431712 34432015 -32235990 - AluJb SINE Alu 0 301 1 8029 200 54 34 chr20 34432015 34432952 -32235053 - L1MB8 LINE L1 -840 5340 4423 1555 171 91 0 chr20 34432952 34433238 -32234767 - AluJb SINE Alu 0 312 1 8029 200 54 34 chr20 34433238 34434439 -32233566 - L1MB8 LINE L1 -1757 4423 3151 339 203 31 0 chr20 34434439 34434503 -32233502 + MLT1A2 LTR MaLR 309 374 0 324 280 110 42 chr20 34434586 34434854 -32233151 + L1MC4a LINE L1 5737 6030 -91 26 0 0 0 chr20 34434929 34434955 -32233050 + AT_rich Low_complexity Low_complexity 1 26 0 1892 162 3 3 chr20 34434960 34435262 -32232743 + AluJb SINE Alu 1 302 -10 463 232 6 22 chr20 34435263 34435444 -32232561 + GA-rich Low_complexity Low_complexity 3 180 0 229 206 15 15 chr20 34435502 34435570 -32232435 + GA-rich Low_complexity Low_complexity 3 70 0 429 273 63 7 chr20 34435570 34435713 -32232292 + MIR SINE MIR 20 170 -92 2395 30 0 4 chr20 34435819 34436110 -32231895 - AluY SINE Alu 0 306 17 2259 51 12 87 chr20 34436139 34436473 -32231532 + AluY SINE Alu 1 309 -2 875 198 0 47 chr20 34436474 34436646 -32231359 + MER58B DNA MER1_type 178 341 0 388 349 46 76 chr20 34436664 34436976 -32231029 + L2 LINE L2 2884 3183 -89 2477 82 10 0 chr20 34436976 34437282 -32230723 + AluSp SINE Alu 1 309 -4 388 349 46 76 chr20 34437282 34437364 -32230641 + L2 LINE L2 3183 3266 -6 701 231 29 12 chr20 34437450 34437623 -32230382 + MIR SINE MIR 15 190 -72 378 0 0 0 chr20 34438209 34438251 -32229754 + (CCA)n Simple_repeat Simple_repeat 3 44 0 551 249 110 10 chr20 34438647 34438856 -32229149 + MIR SINE MIR 33 262 0 2002 155 0 16 chr20 34438874 34439183 -32228822 + AluJb SINE Alu 1 304 -8 207 100 0 0 chr20 34439184 34439214 -32228791 + (GGGA)n Simple_repeat Simple_repeat 1 30 0 314 280 10 0 chr20 34439243 34439343 -32228662 + L2 LINE L2 2564 2664 -650 1139 242 60 65 chr20 34439343 34439393 -32228612 + L2 LINE L2 2624 2673 -640 2258 96 0 19 chr20 34439393 34439706 -32228299 - AluSp SINE Alu -6 307 1 1139 242 60 65 chr20 34439706 34440321 -32227684 + L2 LINE L2 2673 3312 -1 1229 240 95 43 chr20 34440608 34440906 -32227099 - MER113 DNA MER1_type? -75 446 118 2222 107 3 7 chr20 34440906 34441204 -32226801 + AluSx SINE Alu 1 297 -15 1229 240 95 43 chr20 34441204 34441326 -32226679 - MER113 DNA MER1_type? -403 118 4 307 319 117 0 chr20 34441330 34441518 -32226487 + L2 LINE L2 2882 3091 -181 396 256 58 29 chr20 34441768 34441905 -32226100 + MIR SINE MIR 14 154 -108 458 279 255 31 chr20 34442054 34442258 -32225747 + L2 LINE L2 2763 2920 -393 1512 173 47 53 chr20 34442258 34442559 -32225446 - AluJb SINE Alu -11 301 3 458 279 255 31 chr20 34442559 34442790 -32225215 + L2 LINE L2 2920 3312 -1 421 230 44 62 chr20 34442814 34442927 -32225078 - MIR SINE MIR -63 145 34 284 315 19 38 chr20 34443272 34443447 -32224558 - MIR SINE MIR -65 143 21 668 231 164 27 chr20 34443513 34443738 -32224267 + MIR SINE MIR 7 262 0 531 293 0 30 chr20 34443713 34443880 -32224125 - MIR SINE MIR -89 173 12 * 464 267 62 28 chr20 34444919 34445095 -32222910 - MIR3 SINE MIR -3 205 24 217 341 44 44 chr20 34445684 34445775 -32222230 + L2 LINE L2 3090 3180 -92 2103 135 17 0 chr20 34446045 34446341 -32221664 - AluSx SINE Alu -11 301 1 236 179 0 0 chr20 34446375 34446414 -32221591 + L2 LINE L2 3270 3308 -5 378 0 0 0 chr20 34446437 34446479 -32221526 + (TG)n Simple_repeat Simple_repeat 2 43 0 1023 79 0 0 chr20 34446550 34446676 -32221329 + AluSg/x SINE Alu 173 298 -12 731 264 71 20 chr20 34446789 34446986 -32221019 - MIR SINE MIR -54 208 2 2424 93 0 0 chr20 34447033 34447333 -32220672 - AluSx SINE Alu -12 300 1 435 324 79 0 chr20 34448110 34448249 -32219756 - MIR3 SINE MIR -42 166 17 287 227 30 0 chr20 34448253 34448319 -32219686 - MIR SINE MIR -76 132 65 281 267 143 0 chr20 34448521 34448649 -32219356 - MIR SINE MIR -65 197 48 557 257 105 7 chr20 34448707 34448859 -32219146 - MIR SINE MIR -62 200 34 1893 155 14 0 chr20 34448868 34448886 -32219119 - AluJb SINE Alu -12 300 284 234 0 0 0 chr20 34448886 34448912 -32219093 + (TG)n Simple_repeat Simple_repeat 1 26 0 1893 155 14 0 chr20 34448912 34449189 -32218816 - AluJb SINE Alu -28 284 1 181 320 19 39 chr20 34449432 34449535 -32218470 + MIR3 SINE MIR 87 187 -21 214 308 62 0 chr20 34450173 34450238 -32217767 - MIR SINE MIR -7 255 187 * 283 296 138 6 chr20 34450233 34450392 -32217613 + L2 LINE L2 2782 2961 -353 2273 109 7 7 chr20 34450712 34451014 -32216991 - AluJb SINE Alu -10 302 1 991 238 72 55 chr20 34451126 34451488 -32216517 + MLT1K LTR MaLR 138 505 -83 343 235 74 12 chr20 34451488 34451569 -32216436 + L2 LINE L2 3185 3270 -2 234 222 74 83 chr20 34451540 34451648 -32216357 - MIR SINE MIR -37 225 119 * 489 223 38 27 chr20 34451966 34451985 -32216020 - L1ME2 LINE L1 -111 6059 6042 2294 113 3 0 chr20 34451985 34452287 -32215718 + AluSx SINE Alu 1 303 -9 489 223 38 27 chr20 34452287 34452425 -32215580 - L1ME2 LINE L1 -128 6042 5905 183 80 0 0 chr20 34452441 34452466 -32215539 + (GGGA)n Simple_repeat Simple_repeat 4 28 0 1384 158 177 26 chr20 34453734 34453999 -32214006 - AluJo SINE Alu -5 307 3 916 249 75 60 chr20 34455177 34455510 -32212495 - MER102b DNA MER1_type -2 339 2 813 302 42 78 chr20 34457104 34457537 -32210468 - L2 LINE L2 -46 3267 2820 2280 117 0 0 chr20 34457537 34457837 -32210168 + AluSx SINE Alu 3 302 -10 813 302 42 78 chr20 34457837 34457921 -32210084 - L2 LINE L2 -493 2820 2735 2226 118 3 0 chr20 34457921 34458218 -32209787 - AluSq SINE Alu -15 298 1 813 302 42 78 chr20 34458218 34458267 -32209738 - L2 LINE L2 -578 2735 2686 1879 132 0 69 chr20 34458267 34458586 -32209419 - AluJb SINE Alu -15 297 1 813 302 42 78 chr20 34458586 34458665 -32209340 - L2 LINE L2 -627 2686 2636 206 277 101 34 chr20 34458675 34458794 -32209211 + MIR SINE MIR 71 197 -65 861 190 44 0 chr20 34459398 34459556 -32208449 + FAM SINE Alu 2 166 -9 2398 101 0 3 chr20 34459671 34459977 -32208028 - AluSx SINE Alu -7 305 1 327 49 0 0 chr20 34460160 34460201 -32207804 + (TTG)n Simple_repeat Simple_repeat 2 42 0 877 120 0 0 chr20 34460203 34460320 -32207685 - FLAM_C SINE Alu -25 118 2 455 259 123 29 chr20 34460357 34460527 -32207478 - MIR SINE MIR -6 256 71 1770 152 36 26 chr20 34460527 34460836 -32207169 + AluJo SINE Alu 1 312 0 1972 122 24 11 chr20 34460975 34461262 -32206743 - AluSx SINE Alu -21 291 1 254 230 81 27 chr20 34461378 34461452 -32206553 - L2 LINE L2 0 3313 3236 195 277 117 21 chr20 34461513 34461607 -32206398 - L2 LINE L2 -925 2389 2287 1165 246 97 27 chr20 34461737 34462140 -32205865 + MLT1K LTR MaLR 150 580 -8 231 255 0 0 chr20 34462144 34462191 -32205814 - L2 LINE L2 -1022 2292 2246 216 86 0 0 chr20 34462242 34462277 -32205728 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1906 159 0 14 chr20 34462278 34462567 -32205438 - AluJb SINE Alu -26 286 2 476 339 76 26 chr20 34462637 34463018 -32204987 - L2 LINE L2 -656 2658 2259 1864 113 92 24 chr20 34463575 34463867 -32204138 - AluSx SINE Alu 0 312 1 2101 98 84 0 chr20 34463878 34464164 -32203841 - AluSx SINE Alu -2 310 1 357 279 25 8 chr20 34464176 34464298 -32203707 - L2 LINE L2 -54 3259 3136 244 258 75 32 chr20 34464381 34464474 -32203531 - MIR SINE MIR -74 134 38 242 302 179 32 chr20 34465187 34465439 -32202566 - L3b LINE CR1 -28 1555 1267 401 302 126 13 chr20 34466578 34466737 -32201268 - MER5A DNA MER1_type -6 183 7 771 226 133 0 chr20 34466799 34466994 -32201011 + MIR SINE MIR 30 250 -12 189 0 0 0 chr20 34466995 34467016 -32200989 + (CAT)n Simple_repeat Simple_repeat 1 21 0 2421 102 0 6 chr20 34468383 34468696 -32199309 + AluSx SINE Alu 1 311 -1 258 352 69 25 chr20 34468780 34468939 -32199066 + MIR3 SINE MIR 36 201 -7 2618 64 0 3 chr20 34470632 34470945 -32197060 + AluSx SINE Alu 1 312 0 399 41 0 0 chr20 34470991 34471040 -32196965 + (TAGA)n Simple_repeat Simple_repeat 3 51 0 1662 174 0 10 chr20 34471040 34471333 -32196672 - AluJb SINE Alu -22 290 1 592 297 50 10 chr20 34471420 34471622 -32196383 + MIR SINE MIR 48 257 -5 328 261 14 0 chr20 34471684 34471753 -32196252 - MIR SINE MIR -187 75 6 257 327 55 67 chr20 34471823 34471989 -32196016 + L2 LINE L2 2622 2788 -526 2886 13 0 0 chr20 34471989 34472300 -32195705 - AluY SINE Alu 0 311 1 257 327 55 67 chr20 34472300 34472479 -32195526 + L2 LINE L2 2788 2963 -351 288 0 0 0 chr20 34472593 34472625 -32195380 + (CA)n Simple_repeat Simple_repeat 2 33 0 1132 141 6 0 chr20 34472681 34472844 -32195161 + AluSg/x SINE Alu 133 296 -14 439 301 108 34 chr20 34472959 34473135 -32194870 + MIR SINE MIR 74 262 0 453 292 53 58 chr20 34473142 34473358 -32194647 - L1ME LINE L1 -302 5819 5604 1280 158 66 82 chr20 34473358 34473675 -32194330 + AluJb SINE Alu 1 312 0 453 292 53 58 chr20 34473675 34473893 -32194112 - L1ME LINE L1 -517 5604 5387 255 274 88 35 chr20 34473989 34474102 -32193903 + MIR3 SINE MIR 83 201 -7 2242 113 3 35 chr20 34474114 34474432 -32193573 - AluSx SINE Alu -3 309 2 425 352 89 4 chr20 34474464 34474711 -32193294 + L2 LINE L2 2626 2893 -421 180 262 98 33 chr20 34474758 34474819 -32193186 + L2 LINE L2 2992 3056 -216 * 679 247 46 23 chr20 34474815 34474989 -32193016 + MIR SINE MIR 72 249 -13 526 176 12 0 chr20 34475179 34475264 -32192741 + FLAM_A SINE Alu 13 98 -44 271 222 19 0 chr20 34475265 34475319 -32192686 - L2 LINE L2 -11 3261 3207 2402 75 0 0 chr20 34475438 34475731 -32192274 + AluSg SINE Alu 1 293 -17 491 331 17 23 chr20 34476125 34476300 -32191705 - MIR SINE MIR -69 193 20 705 311 31 9 chr20 34476452 34476680 -32191325 - MIR SINE MIR -29 233 1 542 277 78 0 chr20 34476701 34476867 -32191138 - MIR SINE MIR -80 182 4 1660 156 10 63 chr20 34477022 34477353 -32190652 - AluJb SINE Alu 0 315 1 466 338 33 33 chr20 34477443 34477653 -32190352 + MIR SINE MIR 4 213 -49 926 117 0 71 chr20 34477873 34478014 -32189991 + FLAM_C SINE Alu 1 132 -180 2034 146 0 34 chr20 34478014 34478337 -32189668 + AluJb SINE Alu 1 312 0 926 117 0 71 chr20 34478337 34478349 -32189656 + FLAM_C SINE Alu 132 143 -169 288 135 0 58 chr20 34478525 34478577 -32189428 + MIR3 SINE MIR 112 160 -48 517 268 0 0 chr20 34478656 34478794 -32189211 - MER103 DNA DNA -15 151 14 204 302 48 16 chr20 34478860 34478923 -32189082 + L3 LINE CR1 1509 1573 -4 397 237 253 4 chr20 34479177 34479426 -32188579 - HAL1 LINE L1 -158 2349 2039 2146 126 0 17 chr20 34479433 34479734 -32188271 + AluSx SINE Alu 1 296 -16 564 299 23 17 chr20 34480175 34480349 -32187656 - MIR3 SINE MIR -3 205 31 191 245 0 41 chr20 34480503 34480552 -32187453 - L2 LINE L2 -92 3221 3175 2281 95 0 3 chr20 34480554 34480862 -32187143 + AluSq SINE Alu 1 307 0 2308 100 10 0 chr20 34480885 34481186 -32186819 + AluSx SINE Alu 1 304 -8 853 256 44 32 chr20 34481267 34481517 -32186488 + MIR SINE MIR 2 254 -8 1070 267 177 36 chr20 34481590 34482098 -32185907 - L2 LINE L2 0 3313 2743 605 78 0 0 chr20 34482101 34482178 -32185827 - AluSg SINE Alu -12 298 222 1149 80 0 68 chr20 34482178 34482210 -32185795 - AluSg SINE Alu -155 155 122 2414 91 0 0 chr20 34482210 34482518 -32185487 - AluY SINE Alu -3 308 1 1149 80 0 68 chr20 34482518 34482647 -32185358 - AluSg SINE Alu -188 122 5 1159 250 49 10 chr20 34482654 34482942 -32185063 - L2 LINE L2 -564 2750 2452 355 297 42 17 chr20 34484338 34484456 -32183549 + MIR3 SINE MIR 87 207 -1 218 31 0 31 chr20 34484569 34484601 -32183404 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 203 383 0 0 chr20 34485111 34485205 -32182800 + MIR3 SINE MIR 99 192 -16 235 226 83 12 chr20 34485478 34485562 -32182443 - L3 LINE CR1 -3 1574 1485 539 253 120 0 chr20 34485624 34485782 -32182223 + MIR SINE MIR 58 234 -28 400 256 314 16 chr20 34486030 34486221 -32181784 - L3 LINE CR1 -392 1185 938 261 179 51 0 chr20 34486242 34486320 -32181685 + CT-rich Low_complexity Low_complexity 4 85 0 788 234 0 0 chr20 34486324 34486465 -32181540 - AluJo/FRAM SINE Alu -38 274 134 2091 129 0 44 chr20 34486465 34486783 -32181222 - AluSq SINE Alu -9 304 1 26 0 0 0 chr20 34486990 34487016 -32180989 + AT_rich Low_complexity Low_complexity 1 26 0 1952 153 3 3 chr20 34487305 34487612 -32180393 + AluSx SINE Alu 2 308 -4 955 153 53 0 chr20 34487612 34487762 -32180243 + AluJb SINE Alu 134 291 -21 181 261 65 0 chr20 34487943 34487983 -32180022 - L2 LINE L2 -2743 571 529 457 310 26 26 chr20 34487983 34488138 -32179867 + MER5B DNA MER1_type 1 155 -23 308 202 61 9 chr20 34488207 34488321 -32179684 - Charlie2a DNA MER1_type -33 2829 2710 607 228 53 0 chr20 34488355 34488526 -32179479 - Charlie2a DNA MER1_type -1212 1650 1471 455 194 28 69 chr20 34488562 34488706 -32179299 - Charlie2b DNA MER1_type -2089 693 556 * 784 208 121 0 chr20 34488703 34488910 -32179095 - Charlie2b DNA MER1_type -2469 313 82 388 392 28 0 chr20 34489661 34489804 -32178201 - L2 LINE L2 0 3272 3126 2195 86 55 0 chr20 34489858 34490150 -32177855 + AluSx SINE Alu 1 308 -4 263 268 71 0 chr20 34490189 34490301 -32177704 + L1M4 LINE L1 4498 4617 -1529 1978 133 30 66 chr20 34490301 34490625 -32177380 - L1MB8 LINE L1 -12 6166 5858 2114 107 7 58 chr20 34490625 34490935 -32177070 + AluSx SINE Alu 1 294 -18 1978 133 30 66 chr20 34490935 34491017 -32176988 - L1MB8 LINE L1 -320 5858 5775 1507 100 5 5 chr20 34491017 34491237 -32176768 - pTR5 LTR ERV1 -2047 391 172 339 255 10 0 chr20 34491240 34491338 -32176667 - LTR30 LTR ERV1 -80 642 544 5371 114 108 64 chr20 34491342 34492465 -32175540 - pTR5 LTR ERV1 -417 2021 742 600 111 0 0 chr20 34492480 34492570 -32175435 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 2413 91 3 3 chr20 34492574 34492883 -32175122 - AluSg SINE Alu -1 309 1 2183 152 11 3 chr20 34492883 34493251 -32174754 - L1MB8 LINE L1 -403 5781 5411 2084 127 3 16 chr20 34493263 34493571 -32174434 - AluSx SINE Alu -8 304 1 765 215 55 0 chr20 34494064 34494227 -32173778 - MER3 DNA MER1_type 0 209 38 243 304 96 9 chr20 34494231 34494346 -32173659 + MIR3 SINE MIR 69 193 -15 733 178 31 0 chr20 34494362 34494491 -32173514 - FLAM_C SINE Alu 0 133 1 306 140 88 0 chr20 34494754 34494811 -32173194 - L3 LINE CR1 -1 1576 1515 210 302 81 35 chr20 34494797 34494883 -32173122 - MER5A DNA MER1_type -7 182 93 * 307 278 227 17 chr20 34495045 34495221 -32172784 - L3 LINE CR1 -107 1470 1258 816 254 120 90 chr20 34495223 34495792 -32172213 - L2 LINE L2 0 3313 2763 1690 166 0 23 chr20 34495792 34495808 -32172197 - AluJo SINE Alu -11 301 286 270 0 0 0 chr20 34495808 34495838 -32172167 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 1690 166 0 23 chr20 34495838 34496129 -32171876 - AluJo SINE Alu -26 286 1 816 254 120 90 chr20 34496129 34496157 -32171848 - L2 LINE L2 -550 2763 2737 2083 121 10 0 chr20 34496157 34496454 -32171551 + AluSx SINE Alu 1 300 -12 816 254 120 90 chr20 34496454 34496586 -32171419 - L2 LINE L2 -576 2737 2562 210 325 40 8 chr20 34496587 34496713 -32171292 - L3 LINE CR1 -315 1262 1133 900 158 0 0 chr20 34496852 34496985 -32171020 + FLAM_A SINE Alu 1 133 0 277 270 174 17 chr20 34497037 34497152 -32170853 - L2 LINE L2 -1 3271 3139 912 269 87 26 chr20 34497340 34497733 -32170272 - L2 LINE L2 -244 3069 2654 552 263 44 89 chr20 34497974 34498002 -32170003 + Charlie8 DNA MER1_type 39 67 -2350 1376 196 19 42 chr20 34498002 34498313 -32169692 - AluJb SINE Alu -8 304 1 552 263 44 89 chr20 34498313 34498359 -32169646 + Charlie8 DNA MER1_type 67 113 -2304 2114 50 40 40 chr20 34498359 34498656 -32169349 - AluY SINE Alu -14 297 1 552 263 44 89 chr20 34498656 34498918 -32169087 + Charlie8 DNA MER1_type 113 361 -2056 198 324 110 83 chr20 34499022 34499150 -32168855 + MIR3 SINE MIR 46 180 -28 2382 70 0 0 chr20 34499150 34499449 -32168556 + AluY SINE Alu 1 299 -12 198 324 110 83 chr20 34499449 34499465 -32168540 + MIR3 SINE MIR 180 194 -14 180 0 0 0 chr20 34499637 34499657 -32168348 + (TG)n Simple_repeat Simple_repeat 2 21 0 537 231 25 103 chr20 34499713 34499797 -32168208 - L2 LINE L2 -21 3292 3203 2318 82 0 3 chr20 34499797 34500101 -32167904 + AluSx SINE Alu 1 303 -9 537 231 25 103 chr20 34500101 34500219 -32167786 - L2 LINE L2 -110 3203 3106 1775 135 11 0 chr20 34500222 34500496 -32167509 - AluSx SINE Alu -18 294 18 391 257 119 9 chr20 34501074 34501183 -32166822 + MIR SINE MIR 19 139 -69 708 260 135 3 chr20 34501350 34501636 -32166369 + L2 LINE L2 2761 3072 -241 401 265 256 19 chr20 34501648 34501676 -32166329 + L1MC4a LINE L1 5575 5595 -2213 2137 116 3 0 chr20 34501676 34501978 -32166027 + AluSq SINE Alu 1 303 -10 401 265 256 19 chr20 34501978 34502160 -32165845 + L1MC4a LINE L1 5595 5835 -1973 1540 165 0 67 chr20 34502165 34502492 -32165513 + AluJb SINE Alu 6 310 -2 247 284 0 0 chr20 34502620 34502694 -32165311 + L1MC4a LINE L1 5885 5958 -1850 2017 138 0 0 chr20 34502815 34503113 -32164892 - AluSx SINE Alu -14 298 1 820 148 0 0 chr20 34503116 34503244 -32164761 - AluSp/q SINE Alu -11 302 175 1656 152 14 30 chr20 34503465 34503761 -32164244 + AluJo SINE Alu 3 293 -19 1643 163 3 27 chr20 34503919 34504214 -32163791 - AluJb SINE Alu -12 300 13 884 224 10 39 chr20 34504214 34504283 -32163722 - AluJo SINE Alu -112 200 131 2236 110 0 0 chr20 34504283 34504584 -32163421 - AluSp SINE Alu -12 301 1 884 224 10 39 chr20 34504584 34504719 -32163286 - AluJo SINE Alu -181 131 2 447 271 59 72 chr20 34504747 34504912 -32163093 + L2 LINE L2 3080 3243 -70 2012 129 10 0 chr20 34504912 34505214 -32162791 - AluSx SINE Alu -7 305 1 447 271 59 72 chr20 34505214 34505284 -32162721 + L2 LINE L2 3243 3312 -1 2060 119 3 0 chr20 34505385 34505679 -32162326 - AluSg SINE Alu -15 295 1 328 282 129 32 chr20 34505715 34505839 -32162166 - MER5A DNA MER1_type -44 145 10 183 42 0 0 chr20 34508680 34508704 -32159301 + (GGA)n Simple_repeat Simple_repeat 3 26 0 197 250 21 0 chr20 34508706 34508754 -32159251 - L2 LINE L2 -91 3181 3133 376 308 19 0 chr20 34508963 34509067 -32158938 + MIR SINE MIR 49 154 -108 933 229 143 0 chr20 34509318 34509541 -32158464 + MIR SINE MIR 8 262 0 21 0 0 0 chr20 34509787 34509808 -32158197 + AT_rich Low_complexity Low_complexity 1 21 0 2126 117 0 13 chr20 34510837 34511153 -32156852 - AluSx SINE Alu 0 312 1 352 254 85 46 chr20 34511291 34511421 -32156584 - MIR SINE MIR -71 191 57 646 315 75 23 chr20 34511965 34512273 -32155732 - L2 LINE L2 -2 3311 2988 396 0 0 0 chr20 34512673 34512717 -32155288 + (TG)n Simple_repeat Simple_repeat 2 45 0 201 304 0 0 chr20 34513096 34513152 -32154853 - L3 LINE CR1 -193 1384 1329 686 267 54 58 chr20 34515268 34515418 -32152587 + MIR SINE MIR 5 155 -107 2131 110 0 0 chr20 34515418 34515710 -32152295 + AluSq SINE Alu 1 292 -21 686 267 54 58 chr20 34515710 34515817 -32152188 + MIR SINE MIR 155 261 -1 228 259 121 0 chr20 34515875 34515933 -32152072 - MIR SINE MIR -107 101 37 869 272 22 9 chr20 34516097 34516321 -32151684 - MIR SINE MIR -13 249 23 2287 137 46 60 chr20 34516604 34517020 -32150985 - MSTB LTR MaLR -16 410 1 1010 263 156 20 chr20 34517287 34517773 -32150232 - L2 LINE L2 0 3313 2736 2134 96 28 0 chr20 34517773 34518086 -32149919 - AluSg SINE Alu 0 310 1 1010 263 156 20 chr20 34518086 34518182 -32149823 - L2 LINE L2 -577 2736 2654 1914 227 107 14 chr20 34518184 34518669 -32149336 - MLT1F LTR MaLR -12 530 1 261 173 93 27 chr20 34518671 34518746 -32149259 - L2 LINE L2 -656 2658 2579 474 271 29 0 chr20 34518955 34519095 -32148910 + L3 LINE CR1 1051 1194 -383 813 275 61 9 chr20 34519557 34519786 -32148219 - MIR SINE MIR 0 262 22 275 266 21 43 chr20 34522356 34522450 -32145555 - MIR3 SINE MIR -116 92 1 666 308 167 47 chr20 34522880 34523082 -32144923 + L2 LINE L2 2018 2194 -1078 2373 75 0 0 chr20 34523082 34523377 -32144628 + AluSc SINE Alu 1 295 -14 666 308 167 47 chr20 34523377 34524119 -32143886 + L2 LINE L2 2194 3069 -203 187 333 18 0 chr20 34524088 34524145 -32143860 - L2 LINE L2 -82 3190 3133 * 563 277 101 28 chr20 34525514 34525854 -32142151 + L2 LINE L2 2776 3137 -176 282 143 0 0 chr20 34525864 34525913 -32142092 + (CA)n Simple_repeat Simple_repeat 2 50 0 1918 141 0 3 chr20 34525934 34526231 -32141774 - AluJb SINE Alu -5 307 12 517 214 21 55 chr20 34526247 34526392 -32141613 + L2 LINE L2 3163 3302 -11 258 385 0 0 chr20 34526395 34526512 -32141493 - L2 LINE L2 -230 3042 2926 191 213 100 62 chr20 34526846 34526926 -32141079 - MIR SINE MIR -117 145 63 2202 98 7 0 chr20 34526993 34527288 -32140717 + AluSq SINE Alu 1 297 -16 2339 87 0 0 chr20 34527373 34527673 -32140332 - AluSx SINE Alu -12 300 1 226 291 107 29 chr20 34527828 34527931 -32140074 - MIR3 SINE MIR -16 192 82 491 276 87 3 chr20 34528052 34528227 -32139778 + MIR SINE MIR 4 203 -59 270 265 0 0 chr20 34528358 34528407 -32139598 - MER63 DNA MER1_type 0 1062 1014 385 295 36 90 chr20 34530324 34530602 -32137403 + L1M4 LINE L1 4488 4750 -1396 2095 111 0 9 chr20 34530939 34531254 -32136751 - AluSx SINE Alu 0 312 1 393 271 0 112 chr20 34531883 34532053 -32135952 + MIR3 SINE MIR 1 151 -57 2194 107 3 0 chr20 34532055 34532354 -32135651 + AluSp SINE Alu 1 300 -13 358 280 162 8 chr20 34532590 34532723 -32135282 + MIR3 SINE MIR 3 151 -78 2215 94 3 3 chr20 34532759 34533066 -32134939 - AluSx SINE Alu -5 307 1 588 193 62 28 chr20 34533114 34533259 -32134746 - MIR SINE MIR -50 212 63 639 275 45 52 chr20 34533547 34533800 -32134205 + MIR SINE MIR 3 247 -15 2253 100 0 0 chr20 34534171 34534472 -32133533 + AluSg SINE Alu 1 301 -9 296 219 0 104 chr20 34535317 34535413 -32132592 + MIR3 SINE MIR 105 190 -18 769 271 79 0 chr20 34536235 34536464 -32131541 + MIR SINE MIR 4 250 -12 459 242 96 121 chr20 34536475 34536756 -32131249 - L3 LINE CR1 -163 1414 1141 2285 100 62 0 chr20 34537684 34538024 -32129981 - MER46B DNA MER2_type 0 236 1 180 51 51 26 chr20 34538093 34538122 -32129883 + (TA)n Simple_repeat Simple_repeat 2 34 -7 2277 81 0 7 chr20 34538122 34538419 -32129586 - AluSx SINE Alu -17 295 1 180 51 51 26 chr20 34538419 34538428 -32129577 + (TA)n Simple_repeat Simple_repeat 34 41 0 607 278 54 8 chr20 34538754 34538928 -32129077 - MIR3 SINE MIR -8 200 20 746 233 105 24 chr20 34539441 34539651 -32128354 - MIR SINE MIR -6 256 30 2103 126 0 0 chr20 34540191 34540484 -32127521 - AluSx SINE Alu -19 293 1 316 293 128 60 chr20 34540487 34540753 -32127252 - L1MC4a LINE L1 -1633 6175 5892 237 277 91 58 chr20 34540764 34541038 -32126967 - L1MC4a LINE L1 -1959 5849 5567 1066 174 12 0 chr20 34541046 34541218 -32126787 - FAM SINE Alu -1 174 1 747 239 43 72 chr20 34541555 34541600 -32126405 - Charlie8 DNA MER1_type -2026 391 346 2402 68 0 0 chr20 34541600 34541896 -32126109 + AluSc SINE Alu 1 296 -13 747 239 43 72 chr20 34541896 34542197 -32125808 - Charlie8 DNA MER1_type -2071 346 55 818 225 197 24 chr20 34542691 34542904 -32125101 + MIR SINE MIR 8 257 -5 356 285 97 14 chr20 34542944 34543088 -32124917 + L2 LINE L2 3153 3308 -5 288 77 0 0 chr20 34543110 34543149 -32124856 + (CA)n Simple_repeat Simple_repeat 1 39 0 217 282 56 0 chr20 34543406 34543477 -32124528 - L2 LINE L2 -10 3262 3188 1881 132 0 14 chr20 34543579 34543860 -32124145 + AluSx SINE Alu 1 277 -35 28 29 0 0 chr20 34544003 34544038 -32123967 + AT_rich Low_complexity Low_complexity 1 35 0 411 321 70 37 chr20 34544072 34544474 -32123531 + L1ME4a LINE L1 5614 6032 -89 600 213 22 0 chr20 34544490 34544626 -32123379 - MIR SINE MIR -41 221 83 430 209 95 9 chr20 34545199 34545304 -32122701 - MIR SINE MIR -64 144 31 256 318 12 12 chr20 34545343 34545428 -32122577 + MIR3 SINE MIR 85 169 -39 * 348 262 62 83 chr20 34545420 34545530 -32122475 - MER5A DNA MER1_type -5 184 76 2107 110 3 3 chr20 34545530 34545830 -32122175 - AluY SINE Alu -11 300 1 348 262 62 83 chr20 34545830 34545864 -32122141 - MER5A DNA MER1_type -113 76 43 352 214 10 10 chr20 34546609 34546707 -32121298 + CT-rich Low_complexity Low_complexity 1 98 0 2268 61 34 0 chr20 34546707 34547003 -32121002 - AluY SINE Alu -5 306 1 256 228 3 24 chr20 34547120 34547202 -32120803 - MIR SINE MIR -97 111 30 193 358 62 0 chr20 34547271 34547352 -32120653 - L2 LINE L2 -1 3271 3186 2308 87 10 0 chr20 34547369 34547679 -32120326 + AluSp SINE Alu 1 313 0 214 311 27 0 chr20 34548112 34548186 -32119819 + L2 LINE L2 2905 2980 -292 225 296 2 0 chr20 34549149 34549222 -32118783 - MIR SINE MIR -73 135 62 207 290 48 0 chr20 34549250 34549312 -32118693 - MIR SINE MIR -114 94 30 1861 153 3 0 chr20 34549869 34550164 -32117841 + AluSx SINE Alu 1 296 -16 246 350 154 0 chr20 34550307 34550527 -32117478 - L2 LINE L2 -542 2772 2519 2352 91 0 3 chr20 34550579 34550886 -32117119 - AluSq SINE Alu -7 306 1 341 233 102 4 chr20 34551300 34551422 -32116583 - MIR SINE MIR -63 145 38 704 259 204 9 chr20 34551427 34551567 -32116438 + L2 LINE L2 2921 3032 -281 2319 89 0 0 chr20 34551567 34551860 -32116145 - AluSg SINE Alu -17 293 1 704 259 204 9 chr20 34551860 34552047 -32115958 + L2 LINE L2 3032 3312 -1 263 316 140 0 chr20 34552075 34552211 -32115794 - MIR SINE MIR -6 256 102 196 286 0 0 chr20 34552510 34552559 -32115446 + MIR SINE MIR 87 135 -73 2363 87 0 3 chr20 34552562 34552873 -32115132 - AluSg SINE Alu 0 310 1 486 320 22 11 chr20 34552907 34553088 -32114917 - MIR SINE MIR 0 262 80 2395 73 0 0 chr20 34553328 34553631 -32114374 - AluY SINE Alu -8 303 1 225 261 29 0 chr20 34553818 34553887 -32114118 + L2 LINE L2 3197 3267 -5 425 309 59 7 chr20 34553905 34554057 -32113948 - MIR SINE MIR -16 246 87 225 308 0 112 chr20 34554149 34554256 -32113749 - MIR3 SINE MIR -21 187 93 239 301 60 12 chr20 34554305 34554388 -32113617 + L2 LINE L2 3171 3257 -15 3767 136 54 30 chr20 34554581 34555047 -32112958 - L1MB7 LINE L1 -16 6168 5680 1796 137 25 3 chr20 34555047 34555331 -32112674 + AluJo SINE Alu 1 290 -22 3767 136 54 30 chr20 34555331 34555528 -32112477 - L1MB7 LINE L1 -504 5680 5489 596 150 10 0 chr20 34555528 34555628 -32112377 + MER2 DNA MER2_type 8 108 -237 235 262 10 19 chr20 34555620 34555723 -32112282 + MER2 DNA MER2_type 59 160 -185 * 1037 123 26 0 chr20 34555728 34555883 -32112122 - AluJo SINE Alu -12 300 142 2153 92 3 3 chr20 34555912 34556204 -32111801 + AluSx SINE Alu 1 292 -20 885 112 68 0 chr20 34556208 34556369 -32111636 + MER2 DNA MER2_type 174 345 0 1646 169 66 6 chr20 34556375 34556880 -32111125 - L1MB7 LINE L1 -700 5478 4944 447 264 112 63 chr20 34556897 34557386 -32110619 - L1ME3A LINE L1 -202 5968 5428 926 111 0 0 chr20 34557733 34557859 -32110146 + AluJo SINE Alu 1 126 -186 390 211 105 121 chr20 34558038 34558152 -32109853 - MIR SINE MIR 0 262 151 817 156 7 30 chr20 34558152 34558287 -32109718 - AluJo SINE Alu -169 133 2 390 211 105 121 chr20 34558287 34558362 -32109643 - MIR SINE MIR -111 151 76 503 327 135 15 chr20 34558686 34559041 -32108964 - L2 LINE L2 -126 3187 2791 1779 199 60 48 chr20 34559308 34559790 -32108215 + L1MD2 LINE L1 5723 6210 -149 336 138 31 0 chr20 34559802 34559867 -32108138 + L1MD2 LINE L1 6291 6357 -2 911 173 19 0 chr20 34559869 34560025 -32107980 + AluJo SINE Alu 130 288 -24 2252 98 0 0 chr20 34560045 34560342 -32107663 + AluSg SINE Alu 1 297 -13 658 255 13 0 chr20 34561165 34561318 -32106687 - MIR SINE MIR -66 196 42 193 299 65 0 chr20 34561317 34561394 -32106611 - L2 LINE L2 -31 3241 3160 * 538 273 80 16 chr20 34561398 34561585 -32106420 - MIR SINE MIR -1 261 63 326 309 8 79 chr20 34562552 34562637 -32105368 - L1MC4a LINE L1 -1836 5972 5897 2302 89 3 3 chr20 34562637 34562941 -32105064 - AluSx SINE Alu -8 304 1 326 309 8 79 chr20 34562941 34562981 -32105024 - L1MC4a LINE L1 -1911 5897 5856 674 296 100 12 chr20 34562981 34563221 -32104784 - MIR SINE MIR 0 262 2 288 258 124 0 chr20 34563297 34563386 -32104619 - L2 LINE L2 -25 3288 3189 198 103 0 0 chr20 34563833 34563862 -32104143 + (CAGCT)n Simple_repeat Simple_repeat 3 31 0 327 306 0 28 chr20 34564260 34564368 -32103637 + MIR3 SINE MIR 76 180 -28 350 295 109 43 chr20 34564379 34564589 -32103416 - L3b LINE CR1 -195 1388 1165 327 318 23 64 chr20 34564716 34564889 -32103116 + L2 LINE L2 2584 2749 -565 21 0 0 0 chr20 34564890 34564911 -32103094 + AT_rich Low_complexity Low_complexity 1 21 0 756 311 154 7 chr20 34565103 34565695 -32102310 + L2 LINE L2 2546 3225 -88 1624 174 0 27 chr20 34565732 34566031 -32101974 - AluJo SINE Alu -19 293 3 22 0 0 0 chr20 34566031 34566053 -32101952 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr20 34566132 34566153 -32101852 + AT_rich Low_complexity Low_complexity 1 21 0 628 144 10 0 chr20 34566271 34566368 -32101637 - AluJ/FLAM SINE Alu -214 98 1 206 226 0 129 chr20 34566572 34566634 -32101371 - L3b LINE CR1 0 1583 1530 391 336 84 46 chr20 34566651 34566850 -32101155 - L3 LINE CR1 -108 1469 1258 1806 132 0 40 chr20 34566850 34567022 -32100983 - AluSx SINE Alu -8 304 147 2388 76 0 7 chr20 34567022 34567323 -32100682 - AluSx SINE Alu -13 299 1 1806 132 0 40 chr20 34567323 34567446 -32100559 - AluSx SINE Alu -165 147 21 391 336 84 46 chr20 34567446 34567484 -32100521 - L3 LINE CR1 -319 1258 1223 353 269 142 22 chr20 34567897 34568031 -32099974 - L2 LINE L2 -1 3312 3163 396 216 72 0 chr20 34568061 34568172 -32099833 + L1ME3A LINE L1 5856 5974 -196 24 0 0 0 chr20 34568198 34568222 -32099783 + AT_rich Low_complexity Low_complexity 1 24 0 1531 183 63 0 chr20 34568305 34568470 -32099535 - AluSx SINE Alu -9 303 111 198 0 0 0 chr20 34568470 34568492 -32099513 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1531 183 63 0 chr20 34568492 34568611 -32099394 - AluSx SINE Alu -201 111 1 390 200 0 0 chr20 34568648 34568723 -32099282 + L1ME2 LINE L1 5687 5761 -2047 2311 58 0 3 chr20 34568821 34569112 -32098893 - AluY SINE Alu -21 290 1 640 259 49 5 chr20 34569137 34569342 -32098663 - L1ME2 LINE L1 -16 6148 5935 330 292 70 11 chr20 34569928 34570113 -32097892 + L1ME2 LINE L1 5894 6089 -75 208 202 50 17 chr20 34570139 34570258 -32097747 + CT-rich Low_complexity Low_complexity 5 127 0 284 263 53 11 chr20 34570268 34570363 -32097642 + MIR3 SINE MIR 66 164 -44 228 261 58 58 chr20 34571396 34571465 -32096540 + MIR SINE MIR 117 185 -77 613 245 7 0 chr20 34571761 34571900 -32096105 + MER45A DNA AcHobo 38 177 -1 218 246 49 16 chr20 34571932 34571993 -32096012 - MIR SINE MIR -190 72 10 195 240 40 0 chr20 34572025 34572075 -32095930 + MIR3 SINE MIR 10 61 -147 307 242 117 17 chr20 34572140 34572260 -32095745 - MIR3 SINE MIR -27 181 50 213 264 11 73 chr20 34572923 34573101 -32094904 + (CGGGG)n Simple_repeat Simple_repeat 2 168 0 1952 100 43 4 chr20 34573371 34573651 -32094354 + AluSx SINE Alu 9 299 -13 2350 93 0 3 chr20 34574665 34574975 -32093030 + AluSx SINE Alu 1 309 -3 918 136 0 0 chr20 34575002 34575134 -32092871 + FLAM_C SINE Alu 1 132 -11 316 322 34 0 chr20 34575232 34575350 -32092655 + MIR SINE MIR 113 234 -28 217 310 0 0 chr20 34575683 34575741 -32092264 + T-rich Low_complexity Low_complexity 2 59 0 362 283 96 18 chr20 34576308 34576465 -32091540 - L1M4 LINE L1 -2849 3297 3115 180 0 0 0 chr20 34576465 34576485 -32091520 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 362 283 96 18 chr20 34576485 34576524 -32091481 - L1M4 LINE L1 -3031 3115 3080 195 129 0 0 chr20 34577011 34577042 -32090963 + (GGGAA)n Simple_repeat Simple_repeat 5 35 0 340 299 27 36 chr20 34577138 34577292 -32090713 + MIR SINE MIR 51 206 -56 283 289 18 44 chr20 34577343 34577457 -32090548 - L2 LINE L2 -159 3113 3003 421 280 12 0 chr20 34578855 34579023 -32088982 + (CA)n Simple_repeat Simple_repeat 2 171 0 323 350 55 51 chr20 34581743 34581903 -32086102 - L1ME4a LINE L1 0 6121 5958 2279 109 0 0 chr20 34581903 34582206 -32085799 - AluSx SINE Alu -9 303 1 323 350 55 51 chr20 34582206 34582282 -32085723 - L1ME4a LINE L1 -163 5958 5884 253 323 100 72 chr20 34582399 34582524 -32085481 - MIR SINE MIR -58 150 27 655 329 63 40 chr20 34584317 34584764 -32083241 - L2 LINE L2 -663 2651 2195 326 324 34 51 chr20 34584916 34585092 -32082913 - L1MC4a LINE L1 -1896 5912 5740 2533 36 0 3 chr20 34585200 34585503 -32082502 + AluY SINE Alu 1 302 -9 21 0 0 0 chr20 34585568 34585589 -32082416 + AT_rich Low_complexity Low_complexity 1 21 0 2088 107 0 29 chr20 34585658 34585966 -32082039 - AluSx SINE Alu -13 299 1 269 354 39 0 chr20 34587892 34588019 -32079986 - L2 LINE L2 -1 3312 3181 449 324 48 25 chr20 34588706 34588945 -32079060 + MIR SINE MIR 13 258 -4 355 322 117 0 chr20 34589190 34589361 -32078644 - MIR SINE MIR -4 258 68 223 273 77 72 chr20 34593110 34593249 -32074756 - MIR SINE MIR -85 123 9 275 250 44 0 chr20 34599341 34599409 -32068596 + L2 LINE L2 3193 3263 -9 294 264 69 0 chr20 34600828 34600900 -32067105 - L2 LINE L2 -1 3312 3236 208 305 34 0 chr20 34602230 34602289 -32065716 + MIR SINE MIR 87 147 -61 1642 140 53 13 chr20 34602469 34602769 -32065236 + AluJo SINE Alu 1 312 0 437 276 90 0 chr20 34603016 34603161 -32064844 + MIR SINE MIR 86 243 -19 237 303 45 11 chr20 34603902 34603991 -32064014 + L2 LINE L2 2677 2768 -546 1537 156 82 92 chr20 34603992 34604075 -32063930 - MER47B DNA MER2_type -1905 418 336 2155 110 10 3 chr20 34604075 34604376 -32063629 + AluSg SINE Alu 1 303 -7 1537 156 82 92 chr20 34604376 34604695 -32063310 - MER47B DNA MER2_type -1987 336 20 181 319 14 28 chr20 34605060 34605132 -32062873 + L2 LINE L2 3138 3208 -64 647 205 145 56 chr20 34605311 34605719 -32062286 + Charlie8 DNA MER1_type 20 470 -1947 346 332 57 89 chr20 34606311 34606395 -32061610 + L1MEd LINE L1 4 89 -6030 1838 109 25 14 chr20 34606395 34606679 -32061326 + AluSx SINE Alu 1 287 -25 346 332 57 89 chr20 34606679 34606910 -32061095 + L1MEd LINE L1 89 309 -5810 544 111 0 0 chr20 34607173 34607245 -32060760 - AluS SINE Alu -238 74 3 855 80 0 0 chr20 34607411 34607523 -32060482 - AluSg/x SINE Alu -9 301 190 393 261 169 42 chr20 34607541 34607802 -32060203 + L1MEd LINE L1 703 996 -5123 217 261 101 0 chr20 34607941 34608010 -32059995 - MIR SINE MIR -62 146 78 1916 116 3 10 chr20 34608101 34608394 -32059611 - AluSx SINE Alu -19 293 3 209 265 80 108 chr20 34608410 34608558 -32059447 + L3 LINE CR1 1330 1470 -107 1843 104 6 83 chr20 34608558 34608885 -32059120 - AluSq SINE Alu -11 302 1 209 265 80 108 chr20 34608885 34608985 -32059020 + L3 LINE CR1 1470 1571 -6 296 281 52 21 chr20 34609513 34609609 -32058396 + MIR SINE MIR 9 107 -155 736 288 165 19 chr20 34609953 34610384 -32057621 + L1MC4a LINE L1 5444 5937 -1871 215 344 62 0 chr20 34610561 34610657 -32057348 + MIR SINE MIR 122 223 -39 314 85 21 0 chr20 34610870 34610917 -32057088 - MADE1 DNA Mariner 0 80 33 243 280 88 93 chr20 34611170 34611352 -32056653 - MIR3 SINE MIR -3 205 25 2150 108 6 13 chr20 34611409 34611723 -32056282 + AluSx SINE Alu 1 312 0 188 295 33 0 chr20 34612291 34612352 -32055653 + L2 LINE L2 3208 3270 -2 1760 237 181 28 chr20 34612881 34613573 -32054432 + L2 LINE L2 2177 2974 -340 213 246 35 0 chr20 34615105 34615162 -32052843 + MIR SINE MIR 73 131 -77 2026 108 0 0 chr20 34615273 34615551 -32052454 - AluSx SINE Alu -33 279 2 240 320 124 0 chr20 34615597 34615694 -32052311 + MIR3 SINE MIR 81 189 -19 1692 155 10 23 chr20 34615840 34616144 -32051861 + AluJb SINE Alu 6 305 -7 748 242 99 31 chr20 34616246 34616469 -32051536 + MIR SINE MIR 1 238 -24 3621 183 28 21 chr20 34617235 34617638 -32050367 - L1MB8 LINE L1 0 6247 5835 1819 147 16 22 chr20 34617638 34617952 -32050053 + AluJb SINE Alu 1 312 0 3621 183 28 21 chr20 34617952 34618309 -32049696 - L1MB8 LINE L1 -412 5835 5482 1098 187 75 37 chr20 34618328 34618569 -32049436 - AluJo SINE Alu -62 250 1 8154 225 66 59 chr20 34618569 34619316 -32048689 - L1MB8 LINE L1 -743 5472 4732 1852 152 7 3 chr20 34619316 34619612 -32048393 - AluJo SINE Alu -15 297 1 8154 225 66 59 chr20 34619612 34621303 -32046702 - L1MB8 LINE L1 -1483 4732 3054 670 120 54 174 chr20 34621303 34621487 -32046518 - AluSc SINE Alu -13 296 135 8154 225 66 59 chr20 34621487 34622065 -32045940 - L1MB8 LINE L1 -3161 3054 2482 1734 115 25 18 chr20 34622065 34622343 -32045662 + AluSx SINE Alu 1 280 -32 8154 225 66 59 chr20 34622343 34622721 -32045284 - L1MB8 LINE L1 -3733 2482 2108 2537 48 0 3 chr20 34622721 34623032 -32044973 - AluY SINE Alu -1 310 1 8154 225 66 59 chr20 34623032 34623061 -32044944 - L1MB8 LINE L1 -4107 2108 2081 2119 110 3 0 chr20 34623061 34623360 -32044645 + AluSp SINE Alu 6 305 -8 8154 225 66 59 chr20 34623360 34623415 -32044590 - L1MB8 LINE L1 -4134 2081 2028 693 119 30 0 chr20 34623415 34623516 -32044489 - U6 snRNA snRNA -2 105 2 8154 225 66 59 chr20 34623516 34623774 -32044231 - L1MB8 LINE L1 -4187 2028 1740 2029 252 61 45 chr20 34623808 34624331 -32043674 - L1M4c LINE L1 -4452 2686 2173 1305 196 43 43 chr20 34624331 34624632 -32043373 - AluJb SINE Alu -11 301 1 2029 252 61 45 chr20 34624632 34624985 -32043020 - L1M4c LINE L1 -4965 2173 1639 1642 162 7 0 chr20 34624998 34625276 -32042729 - AluSx SINE Alu -22 290 11 889 161 0 0 chr20 34625284 34625421 -32042584 - AluSq/x SINE Alu -176 137 1 3676 166 63 33 chr20 34625427 34625564 -32042441 - L1M4c LINE L1 -5201 1658 1527 2379 66 0 3 chr20 34625564 34625868 -32042137 - AluYa5 SINE Alu -8 303 1 3676 166 63 33 chr20 34625868 34626017 -32041988 - L1M4c LINE L1 -5332 1527 1384 1680 134 47 4 chr20 34626017 34626293 -32041712 + AluSx SINE Alu 1 288 -24 3676 166 63 33 chr20 34626293 34626784 -32041221 - L1M4c LINE L1 -5475 1384 857 783 176 8 0 chr20 34626807 34626938 -32041067 + AluSq/x SINE Alu 2 133 -179 2842 6 0 0 chr20 34626960 34627275 -32040730 + AluYb8 SINE Alu 1 315 -3 1403 243 58 46 chr20 34627297 34627687 -32040318 - L1M4c LINE L1 -6022 837 306 605 313 27 5 chr20 34628652 34628876 -32039129 + L1ME LINE L1 5596 5824 -297 22 80 0 0 chr20 34628928 34628978 -32039027 + AT_rich Low_complexity Low_complexity 1 50 0 532 192 119 23 chr20 34629546 34629723 -32038282 + L1MC5 LINE L1 7605 7798 -163 1869 139 11 0 chr20 34629761 34630042 -32037963 + AluSx SINE Alu 1 284 -28 210 37 0 0 chr20 34630050 34630077 -32037928 + (CA)n Simple_repeat Simple_repeat 1 27 0 3472 135 21 12 chr20 34630145 34630161 -32037844 + L1MB5 LINE L1 5585 5599 -575 2446 56 0 3 chr20 34630161 34630466 -32037539 + AluY SINE Alu 1 304 -7 3472 135 21 12 chr20 34630466 34630784 -32037221 + L1MB5 LINE L1 5599 5929 -245 1538 164 129 7 chr20 34630784 34631094 -32036911 + MER7A DNA MER2_type 1 346 0 3472 135 21 12 chr20 34631094 34631335 -32036670 + L1MB5 LINE L1 5929 6166 -8 225 225 0 84 chr20 34631365 34631436 -32036569 + L1MC4a LINE L1 5435 5499 -2309 387 310 76 35 chr20 34631500 34631645 -32036360 + L1MC4a LINE L1 5733 5883 -1925 1826 151 6 6 chr20 34631887 34632199 -32035806 + AluSx SINE Alu 1 312 0 234 325 12 0 chr20 34632759 34632839 -32035166 - L3 LINE CR1 -858 719 639 25 0 0 0 chr20 34632930 34632955 -32035050 + AT_rich Low_complexity Low_complexity 1 25 0 269 200 143 14 chr20 34633188 34633258 -32034747 + MLT1B LTR MaLR 22 100 -290 2038 196 72 19 chr20 34633267 34633695 -32034310 + MLT2B3 LTR ERVL 1 451 -103 1129 124 23 0 chr20 34633695 34633872 -32034133 - AluSp SINE Alu -6 307 127 605 181 17 9 chr20 34633873 34633989 -32034016 + MLT2B3 LTR ERVL 438 554 0 1338 173 13 77 chr20 34633991 34634303 -32033702 + MLT1B LTR MaLR 99 390 0 434 299 35 14 chr20 34634897 34635041 -32032964 + MIR SINE MIR 106 252 -10 660 48 0 0 chr20 34635111 34635195 -32032810 - L1PA5 LINE L1 -3 6151 6068 1046 263 134 19 chr20 34635922 34636344 -32031661 - L1MC4a LINE L1 -1639 6169 5797 2154 110 0 3 chr20 34636344 34636644 -32031361 - AluSx SINE Alu -13 299 1 1046 263 134 19 chr20 34636644 34636662 -32031343 - L1MC4a LINE L1 -2011 5797 5782 1674 132 107 13 chr20 34636662 34636972 -32031033 - MER44D DNA MER2_type 0 609 1 1046 263 134 19 chr20 34636972 34637054 -32030951 - L1MC4a LINE L1 -2026 5782 5586 245 260 0 39 chr20 34637059 34637136 -32030869 - Charlie4 DNA MER1_type -5 1956 1883 1905 154 0 6 chr20 34637206 34637517 -32030488 + AluJb SINE Alu 2 310 -2 512 288 65 7 chr20 34637895 34638048 -32029957 + MIR SINE MIR 28 189 -73 1530 169 25 14 chr20 34638485 34638634 -32029371 - AluJo SINE Alu -30 282 127 2160 103 7 3 chr20 34638634 34638936 -32029069 - AluSx SINE Alu -9 303 1 1530 169 25 14 chr20 34638936 34639065 -32028940 - AluJo SINE Alu -185 127 1 282 250 41 15 chr20 34639067 34639178 -32028827 - L1ME LINE L1 -401 5763 5654 387 306 79 76 chr20 34639182 34639486 -32028519 - L1ME LINE L1 -2044 4102 3798 1848 138 21 7 chr20 34639972 34640261 -32027744 - AluSx SINE Alu -19 293 1 490 279 107 15 chr20 34640415 34640687 -32027318 - L1ME3 LINE L1 -196 5966 5670 515 201 40 85 chr20 34641142 34641309 -32026696 - L1MC4a LINE L1 -743 5441 5287 2057 114 0 23 chr20 34641309 34641615 -32026390 - AluSx SINE Alu -13 299 1 515 201 40 85 chr20 34641615 34641721 -32026284 - L1MC4a LINE L1 -897 5287 5178 408 212 182 18 chr20 34643407 34643523 -32024482 + MIR SINE MIR 23 144 -64 1802 171 7 0 chr20 34643529 34643833 -32024172 + AluSx SINE Alu 1 306 -6 855 184 6 25 chr20 34643947 34644110 -32023895 + FRAM SINE Alu 1 160 -6 333 0 0 0 chr20 34644130 34644167 -32023838 + (CA)n Simple_repeat Simple_repeat 2 38 0 989 166 11 11 chr20 34644393 34644568 -32023437 - FAM SINE Alu 0 175 1 21 0 0 0 chr20 34644709 34644730 -32023275 + AT_rich Low_complexity Low_complexity 1 21 0 1783 173 20 10 chr20 34645184 34645490 -32022515 - AluJb SINE Alu -3 309 1 2082 123 20 0 chr20 34645587 34645888 -32022117 - AluSx SINE Alu -5 307 1 282 194 0 145 chr20 34645921 34646045 -32021960 + MER102a DNA MER1_type 222 327 -3 30 0 0 0 chr20 34646124 34646154 -32021851 + AT_rich Low_complexity Low_complexity 1 30 0 1019 194 40 25 chr20 34646155 34646433 -32021572 - L1MA4 LINE L1 -7 6293 6012 1239 179 15 110 chr20 34646672 34647007 -32020998 + MER33 DNA MER1_type 21 323 -1 277 270 79 32 chr20 34647436 34647562 -32020443 - MIR SINE MIR -42 220 89 323 304 228 22 chr20 34647798 34647982 -32020023 - L3 LINE CR1 -93 1484 1263 850 207 79 0 chr20 34648606 34648770 -32019235 - FRAM SINE Alu -2 174 1 339 231 177 41 chr20 34649373 34649520 -32018485 - L2 LINE L2 0 3313 3147 22 35 0 0 chr20 34649660 34649689 -32018316 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 34649770 34649791 -32018214 + AT_rich Low_complexity Low_complexity 1 21 0 2243 93 3 20 chr20 34649795 34650095 -32017910 + AluSx SINE Alu 1 295 -17 21 36 0 0 chr20 34650271 34650299 -32017706 + AT_rich Low_complexity Low_complexity 1 28 0 394 246 208 8 chr20 34650828 34650958 -32017047 + MIR3 SINE MIR 38 193 -15 3287 217 73 14 chr20 34651184 34651781 -32016224 + L1MB8 LINE L1 2405 3084 -3062 2306 99 3 0 chr20 34651781 34652085 -32015920 - AluSx SINE Alu -7 305 1 3287 217 73 14 chr20 34652085 34652474 -32015531 + L1MB8 LINE L1 3084 3449 -2697 1658 175 19 23 chr20 34652474 34652959 -32015046 + AluJo SINE Alu 1 484 0 734 142 0 11 chr20 34652783 34653047 -32014958 + (GAA)n Simple_repeat Simple_repeat 1 262 0 6467 164 106 48 chr20 34653126 34653407 -32014598 + L1MB8 LINE L1 3496 3759 -2419 1967 137 20 13 chr20 34653407 34653707 -32014298 + AluJo SINE Alu 7 308 -4 6467 164 106 48 chr20 34653707 34655976 -32012029 + L1MB8 LINE L1 3759 6173 -5 391 200 0 24 chr20 34655987 34656072 -32011933 + L1MB7 LINE L1 5861 5943 -231 1991 130 46 35 chr20 34656072 34656441 -32011564 + THE1C LTR MaLR 1 373 -2 765 186 231 0 chr20 34656471 34656670 -32011335 + L1MB7 LINE L1 5933 6177 -7 1440 174 18 18 chr20 34656678 34656960 -32011045 + AluJo SINE Alu 6 287 -25 234 196 48 95 chr20 34659162 34659208 -32008797 - L1ME3A LINE L1 -5 6165 6118 1627 173 7 14 chr20 34659208 34659503 -32008502 - AluJb SINE Alu -19 293 1 234 196 48 95 chr20 34659503 34659624 -32008381 - L1ME3A LINE L1 -52 6118 6006 451 276 177 30 chr20 34659660 34660055 -32007950 + L1ME4a LINE L1 4951 5403 -743 919 175 48 10 chr20 34660088 34660294 -32007711 + L1MB8 LINE L1 5263 5476 -702 723 171 0 0 chr20 34660304 34660415 -32007590 + FLAM_C SINE Alu 6 116 -27 3509 173 40 25 chr20 34660445 34661139 -32006866 + L1MB8 LINE L1 5474 6178 0 404 196 165 30 chr20 34661205 34661338 -32006667 + L1ME3A LINE L1 6020 6170 0 * 410 260 154 29 chr20 34661313 34661637 -32006368 + L1ME4a LINE L1 5452 5819 -302 2008 111 36 0 chr20 34661637 34661916 -32006089 - AluSg SINE Alu -21 289 1 410 260 154 29 chr20 34661916 34661928 -32006077 + L1ME4a LINE L1 5819 5828 -293 297 0 0 0 chr20 34662043 34662076 -32005929 + (CA)n Simple_repeat Simple_repeat 2 34 0 640 247 125 103 chr20 34662616 34662768 -32005237 + MLT1G1 LTR MaLR 18 165 -390 1846 154 0 3 chr20 34662768 34663053 -32004952 + AluSx SINE Alu 14 297 -15 640 247 125 103 chr20 34663053 34663365 -32004640 + MLT1G1 LTR MaLR 165 542 -13 223 304 51 0 chr20 34663367 34663446 -32004559 + L2 LINE L2 3009 3091 -181 2321 52 42 0 chr20 34663508 34663794 -32004211 - AluY SINE Alu -13 298 1 41626 66 10 3 chr20 34664380 34670486 -31997519 - L1PA5 LINE L1 -2 6152 11 579 183 10 0 chr20 34670576 34670680 -31997325 + MER5A DNA MER1_type 84 188 -1 388 161 46 23 chr20 34670937 34671024 -31996981 + L1ME4a LINE L1 5998 6086 -35 1280 216 93 30 chr20 34671456 34671880 -31996125 + L1MCa LINE L1 2096 2585 -3841 2257 112 0 0 chr20 34671880 34672175 -31995830 + AluSx SINE Alu 1 295 -17 1280 216 93 30 chr20 34672175 34672437 -31995568 + L1MCa LINE L1 2585 2829 -3597 * 1422 226 50 2 chr20 34672425 34672841 -31995164 + L1MCa LINE L1 3202 3637 -2789 1522 164 30 19 chr20 34672860 34673129 -31994876 + AluJo SINE Alu 30 301 -11 1360 160 59 65 chr20 34673133 34673306 -31994699 + L1MB7 LINE L1 5714 5887 -297 1837 154 0 35 chr20 34673306 34673617 -31994388 + AluJb SINE Alu 3 302 -10 1360 160 59 65 chr20 34673617 34673900 -31994105 + L1MB7 LINE L1 5887 6127 -57 417 121 45 0 chr20 34673942 34674008 -31993997 + L1MB7 LINE L1 6116 6184 0 731 196 22 0 chr20 34674035 34674173 -31993832 + L1MB7 LINE L1 6034 6174 -10 1385 252 140 27 chr20 34674181 34674327 -31993678 + L1MEc LINE L1 2149 2277 -3938 1375 208 18 18 chr20 34674327 34674662 -31993343 + AluJb SINE Alu 1 335 0 1385 252 140 27 chr20 34674662 34674801 -31993204 + L1MEc LINE L1 2277 2399 -3816 2117 130 7 0 chr20 34674801 34675102 -31992903 + AluSx SINE Alu 1 303 -9 1385 252 140 27 chr20 34675102 34675670 -31992335 + L1MEc LINE L1 2399 3064 -3151 1256 220 134 61 chr20 34675672 34676411 -31991594 + L1MEc LINE L1 3711 4541 -1674 2146 108 0 33 chr20 34676414 34676720 -31991285 + AluSx SINE Alu 1 296 -16 927 234 110 72 chr20 34676725 34677071 -31990934 + HAL1 LINE L1 1564 1922 -585 1788 72 126 15 chr20 34677114 34677377 -31990628 + AluSg SINE Alu 1 292 -18 302 206 27 0 chr20 34677417 34677490 -31990515 + L1PB4 LINE L1 6080 6154 -2 316 319 0 0 chr20 34677560 34677651 -31990354 - L1MC4 LINE L1 -1339 6703 6613 315 213 0 0 chr20 34677651 34677726 -31990279 + (TA)n Simple_repeat Simple_repeat 2 76 0 300 253 0 13 chr20 34677726 34677801 -31990204 + L1MCa LINE L1 1995 2068 -4358 377 170 0 32 chr20 34677801 34677895 -31990110 + (TA)n Simple_repeat Simple_repeat 2 92 0 554 237 155 16 chr20 34677938 34678183 -31989822 + HAL1 LINE L1 2062 2340 -167 1641 183 14 3 chr20 34678428 34678723 -31989282 + AluJo SINE Alu 1 298 -14 312 140 88 0 chr20 34679074 34679131 -31988874 - AluSx SINE Alu -61 239 178 1185 145 0 11 chr20 34679176 34679355 -31988650 - AluSx SINE Alu -135 177 1 1032 90 0 0 chr20 34679528 34679673 -31988332 + (TG)n Simple_repeat Simple_repeat 2 146 0 2131 123 3 0 chr20 34679849 34680141 -31987864 + AluSg SINE Alu 1 293 -17 2460 56 0 33 chr20 34680144 34680450 -31987555 + AluY SINE Alu 1 296 -15 231 216 27 14 chr20 34680450 34680524 -31987481 - MER113 DNA MER1_type? -412 109 35 351 276 32 32 chr20 34680692 34680815 -31987190 - L2 LINE L2 -500 2814 2692 609 259 67 26 chr20 34680997 34681190 -31986815 - L2 LINE L2 -898 2416 2216 902 253 20 5 chr20 34681256 34681454 -31986551 - MIR SINE MIR -30 232 32 201 319 154 0 chr20 34681530 34681621 -31986384 - L2 LINE L2 -19 3253 3149 578 263 34 23 chr20 34681638 34681813 -31986192 - MIR SINE MIR -9 253 77 1738 133 50 46 chr20 34681859 34682137 -31985868 + L1MB2 LINE L1 5821 6102 -69 907 164 0 0 chr20 34682137 34682265 -31985740 - FLAM_C SINE Alu -5 128 1 1738 133 50 46 chr20 34682265 34682309 -31985696 + L1MB2 LINE L1 6102 6144 -27 191 119 24 0 chr20 34682309 34682338 -31985667 + (TA)n Simple_repeat Simple_repeat 1 33 -10 1468 200 14 31 chr20 34682338 34682628 -31985377 - AluJb SINE Alu -27 285 1 191 119 24 0 chr20 34682628 34682640 -31985365 + (TA)n Simple_repeat Simple_repeat 33 43 0 2172 108 10 0 chr20 34682665 34682961 -31985044 + AluSg SINE Alu 1 299 -11 1212 128 96 0 chr20 34683023 34683210 -31984795 + AluJo SINE Alu 90 294 -18 22 0 0 0 chr20 34683269 34683291 -31984714 + AT_rich Low_complexity Low_complexity 1 22 0 2335 95 10 0 chr20 34683474 34683770 -31984235 - AluSx SINE Alu -13 299 1 261 247 133 47 chr20 34683919 34684069 -31983936 + MIR SINE MIR 93 255 -7 260 29 0 0 chr20 34684147 34684182 -31983823 - AluJb SINE Alu -5 297 263 902 169 115 16 chr20 34684182 34684365 -31983640 - AluJb SINE Alu -90 222 22 790 204 135 9 chr20 34684853 34685083 -31982922 - MIR SINE MIR 0 262 4 184 310 17 0 chr20 34685086 34685144 -31982861 - L2 LINE L2 -78 3194 3136 225 240 0 27 chr20 34685646 34685721 -31982284 + (CCCCG)n Simple_repeat Simple_repeat 1 73 0 487 232 56 8 chr20 34686830 34686955 -31981050 + MER94 DNA DNA 1 131 -3 1677 175 18 0 chr20 34686995 34687327 -31980678 + L1 LINE L1 4616 4953 -1193 241 221 53 84 chr20 34687328 34687396 -31980609 + AluSg/x SINE Alu 103 169 -133 2211 108 3 0 chr20 34687396 34687683 -31980322 + AluSg SINE Alu 10 297 -13 3220 178 44 33 chr20 34687683 34688120 -31979885 + LTR39 LTR ERV1 169 616 -167 2408 87 0 0 chr20 34688120 34688419 -31979586 + AluSx SINE Alu 1 299 -13 3220 178 44 33 chr20 34688419 34688589 -31979416 + LTR39 LTR ERV1 616 783 0 2390 74 0 0 chr20 34689170 34689467 -31978538 + AluSg SINE Alu 1 297 -13 1017 154 31 6 chr20 34689698 34689860 -31978145 - FRAM SINE Alu 0 166 1 502 234 0 27 chr20 34690017 34690128 -31977877 - L2 LINE L2 -15 3298 3191 195 241 19 0 chr20 34690129 34690183 -31977822 - MIR SINE MIR -2 260 206 225 146 0 0 chr20 34690334 34690375 -31977630 + LTR66 LTR ERVL 399 439 -171 308 244 47 0 chr20 34690381 34690467 -31977538 - L1MC4 LINE L1 -1339 6703 6614 240 251 76 0 chr20 34690471 34690580 -31977425 - L1MC4 LINE L1 -1139 6646 6578 225 231 62 0 chr20 34690593 34690658 -31977347 - L1MC3 LINE L1 -1139 6646 6578 555 270 0 0 chr20 34690668 34690842 -31977163 + (TA)n Simple_repeat Simple_repeat 1 174 0 271 189 28 30 chr20 34690842 34690948 -31977057 - L1MCa LINE L1 -1339 6983 2006 240 300 0 0 chr20 34690871 34690961 -31977044 + L1MC4 LINE L1 6614 6703 -1339 * 200 222 0 0 chr20 34690962 34691007 -31976998 + (TA)n Simple_repeat Simple_repeat 1 45 0 1095 155 0 0 chr20 34691062 34691217 -31976788 - FRAM SINE Alu -8 158 4 1678 266 77 22 chr20 34691231 34691372 -31976633 - L1MC4 LINE L1 -142 7900 7768 2216 117 3 10 chr20 34691372 34691679 -31976326 - AluSp SINE Alu -6 307 3 2205 125 0 0 chr20 34691681 34691977 -31976028 - AluSx SINE Alu -16 296 1 1678 266 77 22 chr20 34691977 34692472 -31975533 - L1MC4 LINE L1 -274 7768 7226 1707 109 40 66 chr20 34692476 34692778 -31975227 - AluSx SINE Alu -18 294 1 1146 68 0 0 chr20 34692813 34692945 -31975060 - AluY SINE Alu -179 132 1 567 243 119 18 chr20 34692946 34693164 -31974841 - L1MC4 LINE L1 -804 7238 6999 1551 179 23 83 chr20 34693175 34693560 -31974445 - L1ME2 LINE L1 -9 6155 5794 1186 186 0 1 chr20 34693581 34693845 -31974160 + AluJo SINE Alu 2 300 -12 1667 101 53 98 chr20 34693849 34693990 -31974015 + MER39B LTR ERV1 20 166 -487 2363 101 3 0 chr20 34693990 34694298 -31973707 + AluSx SINE Alu 1 309 -3 1667 101 53 98 chr20 34694298 34694494 -31973511 + MER39B LTR ERV1 166 342 -311 380 227 0 0 chr20 34694551 34694626 -31973379 - L1MC4 LINE L1 -1033 7009 6935 180 301 0 0 chr20 34694864 34694967 -31973038 + (CA)n Simple_repeat Simple_repeat 2 104 0 220 318 15 15 chr20 34695008 34695074 -31972931 - L2 LINE L2 -21 3251 3186 1602 161 21 24 chr20 34695109 34695400 -31972605 + AluJb SINE Alu 9 298 -14 556 286 52 7 chr20 34695553 34695707 -31972298 - L2 LINE L2 -3 3269 3109 743 190 0 0 chr20 34695742 34695858 -31972147 - FLAM_C SINE Alu -22 121 6 1716 101 13 21 chr20 34696025 34696263 -31971742 - AluSc SINE Alu -18 291 56 681 295 42 25 chr20 34696346 34696702 -31971303 + L1M4 LINE L1 3255 3616 -2530 2577 111 16 5 chr20 34696796 34697167 -31970838 + THE1C LTR MaLR 1 375 0 570 181 145 36 chr20 34697232 34697398 -31970607 - MER5A DNA MER1_type -5 184 1 1837 114 23 0 chr20 34698478 34698741 -31969264 - AluSq SINE Alu -30 283 15 770 161 0 8 chr20 34698743 34698861 -31969144 + FLAM_C SINE Alu 2 118 -25 210 37 0 0 chr20 34698864 34698891 -31969114 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 225 0 0 0 chr20 34699176 34699201 -31968804 + (A)n Simple_repeat Simple_repeat 1 25 0 2106 85 11 0 chr20 34699261 34699571 -31968434 + AluSq SINE Alu 1 313 0 441 139 96 35 chr20 34699780 34699895 -31968110 + MER112 DNA MER1_type 132 253 -7 2787 163 43 13 chr20 34700130 34700684 -31967321 - L1MB7 LINE L1 -19 6165 5595 1304 92 0 6 chr20 34700699 34700873 -31967132 - AluSg/x SINE Alu -55 257 85 397 233 12 0 chr20 34700876 34700962 -31967043 - L1MB7 LINE L1 -574 5606 5520 1986 108 7 0 chr20 34700963 34701272 -31966733 + AluJb SINE Alu 1 311 0 1066 175 21 0 chr20 34701317 34701506 -31966499 - AluJo SINE Alu -119 193 1 33 25 0 0 chr20 34701506 34701546 -31966459 + AT_rich Low_complexity Low_complexity 1 40 0 2214 86 13 0 chr20 34701551 34701852 -31966153 + AluSc SINE Alu 1 305 -4 485 135 29 10 chr20 34701856 34701960 -31966045 - L1MA8 LINE L1 -11 6280 6175 516 242 96 22 chr20 34701997 34702175 -31965830 - LTR33 LTR ERVL -2 519 329 1509 187 72 82 chr20 34702179 34702231 -31965774 - MLT2D LTR ERVL 0 414 363 2162 100 7 3 chr20 34702231 34702532 -31965473 + AluSq SINE Alu 5 306 -7 1509 187 72 82 chr20 34702532 34702896 -31965109 - MLT2D LTR ERVL -51 363 2 2722 57 0 0 chr20 34702946 34703279 -31964726 - L1PA6 LINE L1 -1 6153 5821 840 142 0 0 chr20 34703307 34703427 -31964578 - FLAM_C SINE Alu -23 120 1 697 280 18 84 chr20 34703438 34703713 -31964292 - LTR33 LTR ERVL -264 257 1 240 253 115 22 chr20 34703748 34703930 -31964075 + L1M4 LINE L1 3102 3300 -2846 1707 164 13 26 chr20 34703932 34704236 -31963769 + AluJb SINE Alu 1 300 -12 1765 209 22 79 chr20 34704764 34705198 -31962807 + L1MC5 LINE L1 6735 7129 -832 2332 94 3 0 chr20 34705198 34705507 -31962498 + AluSp SINE Alu 1 310 -3 1765 209 22 79 chr20 34705507 34705652 -31962353 + L1MC5 LINE L1 7129 7281 -680 1066 156 85 0 chr20 34705669 34705880 -31962125 + AluJo SINE Alu 84 312 0 765 199 184 98 chr20 34705891 34706445 -31961560 + L1MC5 LINE L1 7310 7911 -50 856 198 11 0 chr20 34706447 34706624 -31961381 + AluJb SINE Alu 134 312 0 375 207 159 29 chr20 34706628 34706739 -31961266 + L1M4 LINE L1 3072 3227 -2919 1640 131 16 84 chr20 34706750 34707071 -31960934 + AluJb SINE Alu 1 299 -13 812 130 0 55 chr20 34707077 34707223 -31960782 + FLAM_C SINE Alu 1 138 -5 578 295 90 45 chr20 34707276 34707521 -31960484 + L2 LINE L2 3023 3282 -31 1566 173 3 14 chr20 34707521 34707805 -31960200 + AluJb SINE Alu 13 293 -19 578 295 90 45 chr20 34707805 34707827 -31960178 + L2 LINE L2 3282 3302 -11 2002 94 0 85 chr20 34707878 34708208 -31959797 + AluSx SINE Alu 5 306 -6 25 0 0 0 chr20 34708497 34708522 -31959483 + AT_rich Low_complexity Low_complexity 1 25 0 206 333 0 14 chr20 34709107 34709179 -31958826 + MIR SINE MIR 62 132 -76 * 396 215 32 0 chr20 34709167 34709260 -31958745 + L2 LINE L2 2576 2671 -643 679 136 0 27 chr20 34709282 34709392 -31958613 - FLAM_C SINE Alu -25 118 12 668 272 167 4 chr20 34709415 34709771 -31958234 + L2 LINE L2 2701 3104 -209 261 297 11 0 chr20 34709793 34709884 -31958121 - L1P4 LINE L1 -349 5825 5734 2158 101 0 10 chr20 34709890 34710187 -31957818 - AluSg SINE Alu -16 294 1 1124 225 11 22 chr20 34710894 34711179 -31956826 + L2 LINE L2 2643 2922 -350 457 241 143 18 chr20 34711164 34711276 -31956729 + L2 LINE L2 3175 3300 -13 * 582 279 38 0 chr20 34711447 34711605 -31956400 + MIR3 SINE MIR 27 190 -18 338 300 22 0 chr20 34712076 34712166 -31955839 + MLT1J LTR MaLR 2 93 -418 376 177 63 0 chr20 34712238 34712317 -31955688 + MLT1J LTR MaLR 420 503 -8 1923 118 10 23 chr20 34712419 34712724 -31955281 + AluJo SINE Alu 11 311 -1 233 354 72 3 chr20 34712772 34712967 -31955038 + L3 LINE CR1 1008 1279 -298 1884 139 3 0 chr20 34713172 34713459 -31954546 - AluSx SINE Alu -24 288 1 2242 110 3 0 chr20 34713684 34713993 -31954012 - AluSx SINE Alu -2 310 1 3671 136 0 6 chr20 34714125 34714655 -31953350 - MER1A DNA MER1_type 0 527 1 1613 149 45 24 chr20 34714896 34715185 -31952820 - AluJo SINE Alu -17 295 1 541 286 130 6 chr20 34715223 34715384 -31952621 + L3 LINE CR1 1396 1576 -1 2168 95 3 3 chr20 34715476 34715770 -31952235 - AluSq SINE Alu -19 294 1 247 230 14 81 chr20 34716195 34716269 -31951736 + MIR3 SINE MIR 127 195 -13 2307 86 3 0 chr20 34716407 34716709 -31951296 + AluSp SINE Alu 1 303 -10 374 264 86 1 chr20 34716709 34716829 -31951176 + MIR SINE MIR 22 150 -58 329 286 111 16 chr20 34717195 34717357 -31950648 + MIR SINE MIR 15 188 -65 1555 139 128 4 chr20 34717498 34717764 -31950241 - AluJb SINE Alu -3 299 1 424 305 14 14 chr20 34717944 34718085 -31949920 - L1MC/D LINE L1 -2093 5715 5575 302 306 29 65 chr20 34718118 34718288 -31949717 + L2 LINE L2 2288 2451 -863 1216 126 22 72 chr20 34718298 34718472 -31949533 - AluJo SINE Alu -13 299 137 2415 75 0 0 chr20 34718472 34718780 -31949225 - AluY SINE Alu -3 308 1 1216 126 22 72 chr20 34718780 34718827 -31949178 - AluJo SINE Alu -175 137 89 217 208 62 0 chr20 34718906 34718954 -31949051 + MIR3 SINE MIR 144 194 -14 499 264 41 39 chr20 34719585 34719727 -31948278 + MIR SINE MIR 3 146 -62 2271 96 3 0 chr20 34719727 34720029 -31947976 + AluSp SINE Alu 1 303 -10 2293 109 42 28 chr20 34720033 34720392 -31947613 + THE1B LTR MaLR 1 364 0 347 226 189 0 chr20 34720424 34720530 -31947475 - L2 LINE L2 0 3313 3188 367 185 231 0 chr20 34720550 34720658 -31947347 + L2 LINE L2 3180 3312 -1 319 232 14 14 chr20 34720728 34720797 -31947208 + L2 LINE L2 3245 3313 0 566 144 0 52 chr20 34720799 34720887 -31947118 - MER44D DNA MER2_type -1 604 522 4968 114 89 157 chr20 34720887 34721188 -31946817 + Tigger3b DNA MER2_type 1 321 -2707 1108 108 0 60 chr20 34721188 34721200 -31946805 + AluSq SINE Alu 125 136 -177 2201 82 16 10 chr20 34721200 34721506 -31946499 + AluY SINE Alu 1 308 -3 1108 108 0 60 chr20 34721506 34721678 -31946327 + AluSq SINE Alu 136 298 -15 4968 114 89 157 chr20 34721678 34722079 -31945926 + Tigger3b DNA MER2_type 321 747 -2281 2095 97 0 32 chr20 34722079 34722221 -31945784 + AluSx SINE Alu 1 146 -166 2045 114 3 3 chr20 34722221 34722518 -31945487 + AluSx SINE Alu 1 297 -15 2095 97 0 32 chr20 34722518 34722683 -31945322 + AluSx SINE Alu 146 298 -14 4968 114 89 157 chr20 34722683 34723114 -31944891 + Tigger3b DNA MER2_type 747 1230 -1 1779 167 3 7 chr20 34723172 34723466 -31944539 - AluJb SINE Alu -19 293 1 650 163 8 14 chr20 34723466 34723630 -31944375 - MER44D DNA MER2_type -1999 588 425 735 157 74 0 chr20 34723630 34723751 -31944254 - FLAM_C SINE Alu -3 130 1 650 163 8 14 chr20 34723751 34723854 -31944151 - MER44D DNA MER2_type -2162 425 1 190 321 0 0 chr20 34723930 34723983 -31944022 - L2 LINE L2 0 3313 3261 393 361 32 6 chr20 34724071 34724229 -31943776 - L2 LINE L2 -193 3079 2918 2062 98 0 49 chr20 34724365 34724670 -31943335 + AluSx SINE Alu 1 290 -22 276 83 0 0 chr20 34725431 34725467 -31942538 - U4 snRNA snRNA -1 144 109 2001 124 0 3 chr20 34725467 34725765 -31942240 + AluSx SINE Alu 1 297 -15 1073 60 0 0 chr20 34725801 34725934 -31942071 - AluSp SINE Alu -180 133 1 1709 234 44 19 chr20 34726021 34726495 -31941510 - LTR16C LTR ERVL -4 487 2 2352 67 3 3 chr20 34726566 34726863 -31941142 - AluSp SINE Alu -16 297 1 454 233 31 78 chr20 34727004 34727160 -31940845 - MIR SINE MIR -69 139 8 234 118 0 0 chr20 34727188 34727222 -31940783 - MIR3 SINE MIR -25 183 150 606 203 70 21 chr20 34727277 34727420 -31940585 + MER103 DNA DNA 10 159 -7 1936 143 0 0 chr20 34728477 34728771 -31939234 + AluSx SINE Alu 13 306 -6 253 243 66 88 chr20 34728887 34729023 -31938982 - MIR3 SINE MIR -61 147 15 2010 119 13 13 chr20 34729571 34729883 -31938122 + AluJb SINE Alu 1 312 0 297 267 62 95 chr20 34730105 34730232 -31937773 - MIR SINE MIR -33 229 112 1946 146 0 3 chr20 34730232 34730533 -31937472 + AluSx SINE Alu 1 300 -12 297 267 62 95 chr20 34730533 34730610 -31937395 - MIR SINE MIR -150 112 34 303 100 0 0 chr20 34731202 34731242 -31936763 + MER4D LTR ERV1 791 830 -73 419 262 114 7 chr20 34731431 34731574 -31936431 - MIR SINE MIR -75 133 3 2217 76 0 16 chr20 34731677 34731980 -31936025 - AluY SINE Alu -13 298 1 2123 102 10 0 chr20 34732168 34732463 -31935542 + AluYa5 SINE Alu 1 298 -13 2227 106 0 3 chr20 34732465 34732776 -31935229 + AluSx SINE Alu 3 312 0 390 151 58 23 chr20 34732857 34732943 -31935062 + L1MC5 LINE L1 7825 7913 -48 524 259 147 53 chr20 34732943 34733299 -31934706 + L1MEc LINE L1 1439 1760 -4455 1836 149 24 0 chr20 34733299 34733595 -31934410 + AluSx SINE Alu 1 303 -9 524 259 147 53 chr20 34733595 34733933 -31934072 + L1MEc LINE L1 1760 2065 -4150 2236 99 0 3 chr20 34733933 34734245 -31933760 + AluSx SINE Alu 1 311 -1 524 259 147 53 chr20 34734245 34734483 -31933522 + L1MEc LINE L1 2065 2417 -3798 444 287 47 13 chr20 34734771 34734921 -31933084 - MER5B DNA MER1_type -16 162 8 1113 186 5 10 chr20 34734938 34735142 -31932863 - MER3 DNA MER1_type -1 208 6 267 308 0 0 chr20 34735146 34735211 -31932794 + L2 LINE L2 3199 3263 -50 2118 89 28 0 chr20 34735861 34736152 -31931853 - AluSg SINE Alu -11 299 1 602 246 82 134 chr20 34736297 34736663 -31931342 + MLT1L LTR MaLR 110 562 -53 824 196 54 0 chr20 34736821 34736969 -31931036 - FRAM SINE Alu -20 156 1 1667 169 13 13 chr20 34736994 34737301 -31930704 - AluJb SINE Alu -1 311 5 196 284 161 0 chr20 34737302 34737383 -31930622 + MIR SINE MIR 110 203 -59 2014 124 3 3 chr20 34737439 34737730 -31930275 - AluSq SINE Alu -22 291 1 341 188 102 117 chr20 34737759 34737887 -31930118 + L2 LINE L2 3188 3313 0 679 269 126 31 chr20 34738433 34738822 -31929183 + L1ME1 LINE L1 5664 6085 -81 2112 90 27 7 chr20 34738822 34739121 -31928884 + AluSq SINE Alu 1 305 -8 246 301 78 39 chr20 34739356 34739459 -31928546 + MIR SINE MIR 96 202 -60 * 259 351 11 0 chr20 34739444 34739538 -31928467 - L2 LINE L2 -249 3023 2929 379 294 10 0 chr20 34740626 34740728 -31927277 - MIR SINE MIR 0 262 160 1915 179 75 41 chr20 34740776 34741218 -31926787 - LTR2B LTR ERV1 -2 488 32 2197 96 3 3 chr20 34741526 34741838 -31926167 + AluSq SINE Alu 1 312 -1 507 251 59 59 chr20 34741965 34742168 -31925837 + MIR3 SINE MIR 5 207 -1 363 125 0 0 chr20 34742238 34742286 -31925719 - Alu SINE Alu -254 48 1 2291 75 0 19 chr20 34742311 34742619 -31925386 + AluSg SINE Alu 1 302 -8 1529 196 82 94 chr20 34742694 34743205 -31924800 - MLT1D LTR MaLR 0 505 1 431 326 51 6 chr20 34743633 34743811 -31924194 + MIR SINE MIR 71 256 -6 474 284 52 0 chr20 34744162 34744296 -31923709 + MIR3 SINE MIR 30 170 -38 232 239 0 0 chr20 34744458 34744504 -31923501 + GA-rich Low_complexity Low_complexity 3 48 0 543 283 32 78 chr20 34744529 34744748 -31923257 - MIR SINE MIR -20 242 34 1976 119 0 7 chr20 34745191 34745496 -31922509 - AluSx SINE Alu 0 303 1 1548 195 47 0 chr20 34745502 34745800 -31922205 - AluJo SINE Alu 0 312 1 307 146 0 135 chr20 34745846 34745935 -31922070 + L1MB4 LINE L1 6098 6174 0 426 20 0 0 chr20 34745947 34745998 -31922007 + (TCTCCC)n Simple_repeat Simple_repeat 1 51 0 5597 58 28 45 chr20 34745982 34747151 -31920854 + SVA Other Other 34 866 -592 6699 55 10 65 chr20 34747164 34748174 -31919831 + SVA Other Other 433 1386 0 1271 161 5 0 chr20 34748187 34748380 -31919625 + AluJo SINE Alu 1 194 -118 23 0 0 0 chr20 34748406 34748429 -31919576 + AT_rich Low_complexity Low_complexity 1 23 0 2373 92 20 0 chr20 34748465 34748768 -31919237 + AluSx SINE Alu 1 309 -3 1027 244 52 65 chr20 34749130 34749455 -31918550 + LTR37B LTR ERV1 1 320 -148 1803 142 20 30 chr20 34749455 34749758 -31918247 - AluJb SINE Alu -12 300 1 1027 244 52 65 chr20 34749758 34749878 -31918127 + LTR37B LTR ERV1 320 440 -28 2132 127 0 3 chr20 34749881 34750188 -31917817 - AluSx SINE Alu 0 306 1 317 288 54 18 chr20 34750243 34750354 -31917651 - MIR SINE MIR -62 200 86 420 323 78 18 chr20 34750419 34750586 -31917419 - L2 LINE L2 0 3272 3096 201 39 0 0 chr20 34750629 34750655 -31917350 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 333 174 104 87 chr20 34750705 34750820 -31917185 - L2 LINE L2 -188 3084 2968 1984 112 91 0 chr20 34751072 34751358 -31916647 - AluJo SINE Alu 0 312 1 1058 273 99 83 chr20 34751360 34751420 -31916585 + L1M4 LINE L1 4053 4111 -2035 2477 96 0 0 chr20 34751420 34751723 -31916282 - AluSx SINE Alu -9 303 1 1058 273 99 83 chr20 34751723 34752030 -31915975 + L1M4 LINE L1 4111 4412 -1734 2198 109 14 0 chr20 34752030 34752314 -31915691 + AluSx SINE Alu 1 288 -24 1058 273 99 83 chr20 34752314 34752671 -31915334 + L1M4 LINE L1 4412 4762 -1384 2483 87 3 0 chr20 34752671 34752983 -31915022 + AluSp SINE Alu 1 313 0 1058 273 99 83 chr20 34752983 34753387 -31914618 + L1M4 LINE L1 4762 5201 -945 1018 101 0 54 chr20 34753388 34753536 -31914469 + FLAM_C SINE Alu 1 140 -3 289 146 0 0 chr20 34753536 34753584 -31914421 - L1P3 LINE L1 -5790 671 624 859 151 7 0 chr20 34753590 34753736 -31914269 - Tigger3(Golem) DNA MER2_type -87 2942 2796 12233 91 10 31 chr20 34753742 34754213 -31913792 + L1PA7 LINE L1 5 485 -5976 2409 99 0 0 chr20 34754213 34754517 -31913488 + AluSg SINE Alu 1 304 -6 12233 91 10 31 chr20 34754517 34754902 -31913103 + L1PA7 LINE L1 485 877 -5584 2254 99 3 10 chr20 34754902 34755195 -31912810 + AluSx SINE Alu 7 297 -15 12233 91 10 31 chr20 34755195 34756314 -31911691 + L1PA7 LINE L1 877 1955 -4506 7857 71 12 6 chr20 34756314 34758148 -31909857 + L1PA7 LINE L1 4616 6469 0 1575 120 8 11 chr20 34758148 34758414 -31909591 - Tigger3(Golem) DNA MER2_type -239 2790 2526 525 282 14 21 chr20 34758840 34758982 -31909023 + MIR SINE MIR 6 146 -116 351 136 0 0 chr20 34759004 34759063 -31908942 + (TCCC)n Simple_repeat Simple_repeat 1 59 0 461 148 8 33 chr20 34759065 34759187 -31908818 + CT-rich Low_complexity Low_complexity 1 119 0 736 146 9 0 chr20 34759188 34759298 -31908707 - FLAM_C SINE Alu -30 113 3 261 206 82 62 chr20 34759314 34759411 -31908594 + MIR SINE MIR 164 262 0 2319 93 7 0 chr20 34759978 34760267 -31907738 - AluSx SINE Alu -4 308 18 431 155 12 36 chr20 34760274 34760358 -31907647 + MIR SINE MIR 39 120 -142 802 155 7 42 chr20 34760361 34760503 -31907502 - FLAM_C SINE Alu -4 139 3 1140 150 9 62 chr20 34760503 34760750 -31907255 - AluJo SINE Alu 0 312 83 619 310 65 23 chr20 34760993 34761209 -31906796 + MIR SINE MIR 17 241 -21 2427 115 0 0 chr20 34761345 34761657 -31906348 + AluSx SINE Alu 1 312 0 1465 247 69 43 chr20 34761849 34762236 -31905769 + L1ME3A LINE L1 5386 5792 -378 2010 113 4 4 chr20 34762236 34762502 -31905503 - AluJb SINE Alu -19 293 28 1465 247 69 43 chr20 34762502 34762652 -31905353 + L1ME3A LINE L1 5792 5937 -233 2218 104 50 0 chr20 34762930 34763228 -31904777 + AluSq SINE Alu 1 313 0 1443 159 88 32 chr20 34763661 34763944 -31904061 + AluJo SINE Alu 1 299 -13 1837 138 15 0 chr20 34764003 34764264 -31903741 - AluSx SINE Alu -14 298 34 660 234 37 103 chr20 34764282 34764555 -31903450 + MER112 DNA MER1_type 2 256 0 392 296 0 10 chr20 34764735 34764833 -31903172 + MIR SINE MIR 43 139 -69 214 240 0 0 chr20 34764995 34765045 -31902960 + GA-rich Low_complexity Low_complexity 1 50 0 617 198 136 19 chr20 34765983 34766145 -31901860 - MIR SINE MIR 0 262 82 2412 115 0 0 chr20 34766514 34766826 -31901179 - AluSx SINE Alu 0 312 1 211 333 14 0 chr20 34766826 34766895 -31901110 - L2 LINE L2 -248 3024 2955 466 270 251 14 chr20 34767047 34767258 -31900747 + MIR SINE MIR 2 262 0 194 311 233 27 chr20 34767270 34767489 -31900516 - L2 LINE L2 -548 2766 2503 319 197 16 47 chr20 34767561 34767659 -31900346 + MIR SINE MIR 100 192 -70 290 222 0 12 chr20 34768068 34768149 -31899856 + (CGGGG)n Simple_repeat Simple_repeat 5 84 0 2514 59 3 3 chr20 34768675 34768981 -31899024 - AluSx SINE Alu -6 306 1 30 45 0 0 chr20 34770411 34770455 -31897550 + AT_rich Low_complexity Low_complexity 1 44 0 342 325 182 35 chr20 34770462 34770537 -31897468 + L2 LINE L2 1751 1814 -1500 2176 97 59 0 chr20 34770537 34770826 -31897179 - AluSg SINE Alu -4 306 1 342 325 182 35 chr20 34770826 34771174 -31896831 + L2 LINE L2 1814 2236 -1078 2356 95 0 32 chr20 34771218 34771533 -31896472 + AluSx SINE Alu 1 305 -7 2909 10 0 0 chr20 34771604 34771911 -31896094 - AluYa5 SINE Alu -4 307 1 2572 59 0 7 chr20 34772046 34772352 -31895653 + AluY SINE Alu 1 304 -7 1801 134 36 14 chr20 34772368 34772644 -31895361 + AluJo SINE Alu 13 294 -18 213 350 122 41 chr20 34772679 34772999 -31895006 + L2 LINE L2 2263 2608 -706 529 344 12 43 chr20 34773003 34773060 -31894945 + LTR16A LTR ERVL 1 58 -392 2207 109 0 3 chr20 34773060 34773379 -31894626 + AluSq SINE Alu 1 313 0 529 344 12 43 chr20 34773379 34773574 -31894431 + LTR16A LTR ERVL 58 245 -205 284 297 11 0 chr20 34773619 34773710 -31894295 + LTR16A LTR ERVL 259 350 -100 245 375 111 46 chr20 34773814 34773933 -31894072 + L2 LINE L2 2601 2711 -603 2207 100 0 4 chr20 34773933 34774262 -31893743 - AluSx SINE Alu 0 330 3 245 375 111 46 chr20 34774262 34774353 -31893652 + L2 LINE L2 2711 2835 -479 2207 100 0 0 chr20 34774353 34774669 -31893336 - AluSg SINE Alu 0 316 1 245 375 111 46 chr20 34774669 34774716 -31893289 + L2 LINE L2 2835 2878 -436 512 307 42 44 chr20 34774864 34775317 -31892688 - LTR67 LTR ERVL -10 547 20 611 158 11 0 chr20 34775402 34775497 -31892508 - AluJb SINE Alu -17 295 200 2456 85 7 0 chr20 34775790 34776096 -31891909 + AluSx SINE Alu 1 308 -4 196 310 225 21 chr20 34776193 34776281 -31891724 - MIR SINE MIR -71 191 122 2356 163 21 14 chr20 34776281 34776704 -31891301 + MSTB LTR MaLR 1 426 0 196 310 225 21 chr20 34776704 34776757 -31891248 - MIR SINE MIR -140 122 21 752 97 44 65 chr20 34776854 34777033 -31890972 + L1M4 LINE L1 5300 5472 -702 5654 149 9 23 chr20 34777036 34777516 -31890489 + L1PB1 LINE L1 4526 5011 -1140 2402 63 3 26 chr20 34777516 34777818 -31890187 + AluY SINE Alu 1 295 -16 5654 149 9 23 chr20 34777818 34778979 -31889026 + L1PB1 LINE L1 5011 6150 -1 2457 158 40 19 chr20 34778987 34779385 -31888620 + L1MB7 LINE L1 5461 5872 -312 2294 94 10 0 chr20 34779385 34779683 -31888322 + AluSp SINE Alu 3 303 -10 2457 158 40 19 chr20 34779683 34779760 -31888245 + L1MB7 LINE L1 5872 5946 -238 2228 110 3 19 chr20 34779763 34780071 -31887934 + AluY SINE Alu 1 303 -8 1585 155 47 4 chr20 34780178 34780320 -31887685 - AluJb SINE Alu -43 269 110 207 0 0 0 chr20 34780320 34780343 -31887662 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1585 155 47 4 chr20 34780343 34780458 -31887547 - AluJb SINE Alu -202 110 1 360 327 0 10 chr20 34780501 34780602 -31887403 - MIR3 SINE MIR -102 106 7 277 255 226 0 chr20 34780839 34780945 -31887060 + MIR3 SINE MIR 79 208 0 282 357 113 35 chr20 34781266 34781549 -31886456 - L2 LINE L2 -8 3264 2960 * 449 325 48 0 chr20 34781547 34781673 -31886332 + L2 LINE L2 3141 3272 0 4442 126 166 27 chr20 34781906 34782895 -31885110 + MER11B LTR ERVK 2 1232 -4 324 271 0 12 chr20 34782902 34782987 -31885018 + L2 LINE L2 3189 3272 0 554 283 84 6 chr20 34833806 34833972 -31834033 + L3 LINE CR1 1278 1456 -121 453 268 60 30 chr20 34834008 34834060 -31833945 - L3 LINE CR1 -300 1277 1228 2186 119 0 3 chr20 34834060 34834354 -31833651 - AluSc SINE Alu -15 294 2 453 268 60 30 chr20 34834354 34834469 -31833536 - L3 LINE CR1 -349 1228 1105 21 0 0 0 chr20 34834473 34834494 -31833511 + AT_rich Low_complexity Low_complexity 1 21 0 866 274 108 53 chr20 34834533 34835212 -31832793 - L2 LINE L2 -21 3292 2577 2291 222 59 48 chr20 34835212 34835474 -31832531 + L1ME3A LINE L1 5441 5699 -471 3910 93 39 0 chr20 34835474 34836032 -31831973 - LTR19B LTR ERV1 0 580 1 2291 222 59 48 chr20 34836032 34836363 -31831642 + L1ME3A LINE L1 5699 6046 -124 2408 94 0 0 chr20 34836363 34836670 -31831335 - AluSc SINE Alu -2 307 1 2291 222 59 48 chr20 34836670 34836787 -31831218 + L1ME3A LINE L1 6046 6160 -10 3017 229 73 60 chr20 34836800 34837762 -31830243 - L2 LINE L2 -849 2465 1492 1262 238 68 42 chr20 34837924 34838496 -31829509 + L1ME LINE L1 562 1148 -5057 735 178 8 0 chr20 34838502 34838620 -31829385 + 5S rRNA rRNA 1 119 -2 2292 132 0 0 chr20 34838735 34839045 -31828960 + AluSx SINE Alu 1 310 -2 2154 234 60 19 chr20 34839085 34839097 -31828908 + L1M3d LINE L1 1478 1488 -5052 2142 124 7 3 chr20 34839097 34839404 -31828601 + AluSx SINE Alu 3 310 -2 2154 234 60 19 chr20 34839404 34840149 -31827856 + L1M3d LINE L1 1488 2250 -4290 14512 114 14 43 chr20 34840156 34840324 -31827681 + Tigger1 DNA MER2_type 1 172 -2246 834 169 0 0 chr20 34840324 34840454 -31827551 - FLAM_C SINE Alu -3 130 1 14512 114 14 43 chr20 34840454 34840744 -31827261 + Tigger1 DNA MER2_type 172 469 -1949 2429 77 0 0 chr20 34840744 34841041 -31826964 + AluSg SINE Alu 7 303 -7 14512 114 14 43 chr20 34841041 34841199 -31826806 + Tigger1 DNA MER2_type 469 630 -1788 2339 80 0 27 chr20 34841199 34841499 -31826506 + AluY SINE Alu 1 292 -19 14512 114 14 43 chr20 34841499 34841914 -31826091 + Tigger1 DNA MER2_type 630 1055 -1363 2193 125 0 3 chr20 34841914 34842210 -31825795 - AluSg SINE Alu -15 295 1 14512 114 14 43 chr20 34842210 34842665 -31825340 + Tigger1 DNA MER2_type 1055 1521 -897 2156 115 3 0 chr20 34842665 34842960 -31825045 + AluSg SINE Alu 1 296 -14 14512 114 14 43 chr20 34842960 34843837 -31824168 + Tigger1 DNA MER2_type 1521 2296 -122 1994 140 7 7 chr20 34843837 34844144 -31823861 - AluSx SINE Alu -5 307 1 14512 114 14 43 chr20 34844144 34844264 -31823741 + Tigger1 DNA MER2_type 2296 2418 0 585 227 39 89 chr20 34844266 34844602 -31823403 + L1ME LINE L1 1973 2289 -4107 2341 97 0 0 chr20 34844602 34844900 -31823105 + AluSx SINE Alu 1 298 -14 585 227 39 89 chr20 34844900 34844946 -31823059 + L1ME LINE L1 2289 2336 -4060 1248 234 42 16 chr20 34844996 34845445 -31822560 + L1ME LINE L1 2439 2899 -3316 1566 142 0 0 chr20 34845452 34845671 -31822334 + AluSg/x SINE Alu 83 301 -9 237 209 0 60 chr20 34845671 34845738 -31822267 + L1MEc LINE L1 2295 2357 -4039 1340 230 24 34 chr20 34845786 34846192 -31821813 + L1MEc LINE L1 2439 2841 -3374 1789 94 8 0 chr20 34846192 34846427 -31821578 + AluSp SINE Alu 1 237 -76 1340 230 24 34 chr20 34846427 34846486 -31821519 + L1MEc LINE L1 2841 2899 -3316 335 62 0 0 chr20 34846493 34846541 -31821464 + AluSp SINE Alu 85 132 -171 360 117 0 0 chr20 34846578 34846638 -31821367 + Tigger1 DNA MER2_type 2256 2315 -103 1324 112 0 0 chr20 34846670 34846840 -31821165 + AluSg/x SINE Alu 140 309 -3 2326 215 29 14 chr20 34846840 34847528 -31820477 + L1MEc LINE L1 2909 3606 -2609 408 125 0 0 chr20 34847537 34847601 -31820404 + (TCCC)n Simple_repeat Simple_repeat 3 66 0 496 198 0 10 chr20 34847620 34847716 -31820289 - AluJb SINE Alu 0 312 218 965 135 7 14 chr20 34847723 34847871 -31820134 - AluJb SINE Alu -165 147 1 1225 224 53 65 chr20 34847871 34848187 -31819818 + L1MEc LINE L1 3594 3905 -2310 656 103 0 0 chr20 34848187 34848489 -31819516 + AluSx SINE Alu 1 302 0 1225 224 53 65 chr20 34848489 34848645 -31819360 + L1MEc LINE L1 3905 4061 -2154 376 312 0 0 chr20 34848651 34848667 -31819338 + L1MC4 LINE L1 6613 6628 -1414 2126 96 4 0 chr20 34848667 34848948 -31819057 + AluSp SINE Alu 1 282 -31 376 312 0 0 chr20 34848948 34849024 -31818981 + L1MC4 LINE L1 6627 6705 -1337 * 414 292 0 0 chr20 34848958 34849047 -31818958 - L1MC4 LINE L1 -1339 6703 6615 204 179 0 0 chr20 34849048 34849087 -31818918 + (TA)n Simple_repeat Simple_repeat 1 39 0 459 118 0 53 chr20 34849087 34849163 -31818842 - AluS SINE Alu -240 73 2 250 143 0 0 chr20 34849164 34849206 -31818799 + L1ME1 LINE L1 5230 5271 -875 180 0 0 0 chr20 34849225 34849245 -31818760 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 746 171 8 0 chr20 34849247 34849364 -31818641 - AluJb SINE Alu -193 119 2 3986 188 40 27 chr20 34849364 34849390 -31818615 + L1ME1 LINE L1 5261 5285 -881 2176 96 0 7 chr20 34849390 34849691 -31818314 + AluSg SINE Alu 5 303 -7 3986 188 40 27 chr20 34849691 34850551 -31817454 + L1ME1 LINE L1 5285 6158 -8 227 203 16 0 chr20 34850551 34850615 -31817390 + (TA)n Simple_repeat Simple_repeat 1 65 0 2214 109 0 0 chr20 34850721 34851023 -31816982 - AluSx SINE Alu -10 302 1 198 356 27 0 chr20 34851651 34851724 -31816281 - MIR SINE MIR -113 149 75 288 284 260 47 chr20 34851863 34851886 -31816119 - L2 LINE L2 0 3272 3255 2109 107 10 0 chr20 34851886 34852184 -31815821 + AluSx SINE Alu 1 301 -11 288 284 260 47 chr20 34852184 34852287 -31815718 - L2 LINE L2 -17 3255 3119 1144 328 74 13 chr20 34852388 34852943 -31815062 - L2 LINE L2 -784 2530 1942 298 186 0 0 chr20 34853078 34853137 -31814868 - Charlie2 DNA MER1_type 0 2862 2804 1776 176 3 0 chr20 34853138 34853440 -31814565 + AluJo SINE Alu 1 303 -9 1779 179 0 7 chr20 34853456 34853758 -31814247 + AluJo SINE Alu 1 300 -12 714 226 115 46 chr20 34853836 34853895 -31814110 - Charlie2 DNA MER1_type -2583 279 225 2144 106 6 10 chr20 34853895 34854206 -31813799 - AluSx SINE Alu -2 310 1 714 226 115 46 chr20 34854206 34854407 -31813598 - Charlie2 DNA MER1_type -2637 225 1 242 246 62 31 chr20 34854704 34854769 -31813236 - MARNA DNA Mariner -9 577 511 2048 122 0 10 chr20 34854925 34855229 -31812776 + AluSq SINE Alu 1 301 -12 257 304 17 52 chr20 34855341 34855456 -31812549 - L2 LINE L2 -222 3050 2940 1028 167 0 11 chr20 34855493 34855673 -31812332 + MER45A DNA AcHobo 1 178 0 288 279 23 23 chr20 34855674 34855760 -31812245 - L2 LINE L2 -652 2662 2577 722 298 25 59 chr20 34855853 34856242 -31811763 - L1MC/D LINE L1 -2064 5744 5374 1870 143 7 7 chr20 34856242 34856536 -31811469 + AluSx SINE Alu 1 294 -18 722 298 25 59 chr20 34856536 34856636 -31811369 - L1MC/D LINE L1 -2434 5374 5272 26 0 0 0 chr20 34856640 34856666 -31811339 + AT_rich Low_complexity Low_complexity 1 26 0 496 246 42 122 chr20 34856896 34856985 -31811020 - L1MC4a LINE L1 -1634 6174 6079 1928 147 0 3 chr20 34856985 34857298 -31810707 + AluSx SINE Alu 1 312 0 496 246 42 122 chr20 34857298 34857598 -31810407 - L1MC4a LINE L1 -1729 6079 5819 2346 60 0 10 chr20 34857598 34857900 -31810105 + AluY SINE Alu 1 299 -12 496 246 42 122 chr20 34857900 34857935 -31810070 - L1MC4a LINE L1 -1989 5819 5783 2259 86 0 13 chr20 34858090 34858404 -31809601 - AluSx SINE Alu -2 310 1 201 228 54 87 chr20 34858540 34858632 -31809373 + L2 LINE L2 3012 3100 -172 383 279 224 0 chr20 34858809 34858970 -31809035 + MIR SINE MIR 16 212 -50 2333 83 3 0 chr20 34859109 34859421 -31808584 + AluSp SINE Alu 1 313 0 1169 184 0 0 chr20 34859874 34860080 -31807925 + AluJo SINE Alu 91 296 -16 207 69 0 0 chr20 34860104 34860133 -31807872 + (TAAAAA)n Simple_repeat Simple_repeat 2 30 0 3102 228 125 21 chr20 34860214 34861121 -31806884 + L2 LINE L2 1455 2455 -859 350 230 0 0 chr20 34861544 34861618 -31806387 + L2 LINE L2 2465 2538 -776 1189 256 103 47 chr20 34861687 34861897 -31806108 + L2 LINE L2 2528 2725 -588 983 189 9 125 chr20 34861897 34862225 -31805780 - AluJo SINE Alu -12 290 1 1189 256 103 47 chr20 34862225 34862509 -31805496 + L2 LINE L2 2725 2992 -321 180 0 0 0 chr20 34862509 34862529 -31805476 + (TC)n Simple_repeat Simple_repeat 1 20 0 1189 256 103 47 chr20 34862529 34862653 -31805352 + L2 LINE L2 2992 3108 -205 2081 117 0 3 chr20 34862653 34862981 -31805024 - AluSx SINE Alu 0 327 1 1189 256 103 47 chr20 34862981 34863107 -31804898 + L2 LINE L2 3108 3304 -9 264 118 78 20 chr20 34863177 34863228 -31804777 - Charlie1b DNA MER1_type -5 518 465 1048 181 0 0 chr20 34863228 34863394 -31804611 + FRAM SINE Alu 1 166 0 2085 108 0 20 chr20 34863401 34863707 -31804298 + AluSg SINE Alu 1 300 -10 1457 161 63 67 chr20 34863707 34864137 -31803868 - Charlie1b DNA MER1_type -22 501 74 301 371 127 22 chr20 34864174 34864449 -31803556 + L2 LINE L2 2969 3272 0 2111 105 3 0 chr20 34864453 34864739 -31803266 + AluSq SINE Alu 1 287 -26 1742 160 0 32 chr20 34864818 34865130 -31802875 - AluJb SINE Alu -10 302 1 2011 105 44 0 chr20 34865143 34865437 -31802568 - AluSx SINE Alu 0 312 6 1615 37 0 0 chr20 34865487 34865675 -31802330 + L1PA3 LINE L1 5968 6155 0 7243 33 1 1 chr20 34865680 34866553 -31801452 + L1PA4 LINE L1 5293 6165 0 432 284 122 7 chr20 34866631 34866779 -31801226 - MIR3 SINE MIR -24 184 20 1930 148 3 0 chr20 34867380 34867683 -31800322 - AluSx SINE Alu -8 304 1 643 288 102 26 chr20 34868152 34868378 -31799627 + MIR SINE MIR 20 262 0 205 254 55 36 chr20 34868553 34868608 -31799397 - MIR SINE MIR -187 75 20 263 28 28 0 chr20 34868669 34868705 -31799300 + (CA)n Simple_repeat Simple_repeat 2 38 0 244 244 44 56 chr20 34869151 34869241 -31798764 + L2 LINE L2 3223 3311 -2 42 36 0 0 chr20 34869811 34869867 -31798138 + GC_rich Low_complexity Low_complexity 1 56 0 180 0 0 0 chr20 34869867 34869887 -31798118 + (CTG)n Simple_repeat Simple_repeat 3 22 0 208 138 0 52 chr20 34869918 34869976 -31798029 + (CGG)n Simple_repeat Simple_repeat 2 56 0 32 86 0 0 chr20 34870020 34870101 -31797904 + GC_rich Low_complexity Low_complexity 1 81 0 881 249 62 40 chr20 34870380 34870653 -31797352 + L3 LINE CR1 1190 1468 -109 1189 241 15 11 chr20 34870714 34870975 -31797030 - MIR SINE MIR 0 262 1 500 312 6 13 chr20 34871516 34871673 -31796332 + MIR3 SINE MIR 11 166 -42 238 245 0 0 chr20 34872213 34872262 -31795743 + CT-rich Low_complexity Low_complexity 4 52 0 2144 99 0 0 chr20 34872990 34873317 -31794688 - AluSx SINE Alu 0 327 1 251 269 131 69 chr20 34873699 34873859 -31794146 - MIR3 SINE MIR -5 203 34 217 338 0 0 chr20 34874493 34874570 -31793435 - L3b LINE CR1 -190 1393 1317 296 281 18 44 chr20 34874638 34874752 -31793253 - MIR SINE MIR -60 202 92 2025 114 31 0 chr20 34874797 34875086 -31792919 + AluSx SINE Alu 1 298 -14 236 313 15 0 chr20 34875353 34875420 -31792585 + L2 LINE L2 3242 3309 -4 180 232 110 73 chr20 34875419 34875501 -31792504 + L2 LINE L2 3229 3313 0 * 329 331 73 49 chr20 34875514 34875902 -31792103 - L2 LINE L2 -153 3119 2704 327 111 93 0 chr20 34876011 34876065 -31791940 - AluJ/FLAM SINE Alu -230 72 14 1338 154 36 9 chr20 34876210 34876431 -31791574 + AluSx SINE Alu 59 285 -27 198 71 0 0 chr20 34876431 34876459 -31791546 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 22 35 0 0 chr20 34876570 34876599 -31791406 + AT_rich Low_complexity Low_complexity 1 29 0 245 256 12 24 chr20 34876701 34876783 -31791222 - L1MC5 LINE L1 -32 7929 7849 1485 149 0 4 chr20 34876785 34877027 -31790978 + AluJb SINE Alu 57 297 -15 508 322 104 16 chr20 34877052 34877428 -31790577 + L2 LINE L2 2804 3212 -101 367 307 55 60 chr20 34877554 34877772 -31790233 - L2 LINE L2 -266 3047 2831 1003 178 0 0 chr20 34877789 34877946 -31790059 + FRAM SINE Alu 2 158 -8 209 245 19 19 chr20 34878094 34878147 -31789858 - MIR3 SINE MIR -38 170 118 1788 156 0 0 chr20 34878162 34878438 -31789567 + AluJb SINE Alu 14 289 -23 2120 109 0 7 chr20 34878441 34878735 -31789270 + AluSq SINE Alu 1 292 -21 25 0 0 0 chr20 34878735 34878760 -31789245 + AT_rich Low_complexity Low_complexity 1 25 0 467 341 12 12 chr20 34879267 34879434 -31788571 + MIR3 SINE MIR 4 170 -38 270 222 34 111 chr20 34879672 34879719 -31788286 - MIR SINE MIR -81 127 78 2349 89 0 0 chr20 34879719 34880023 -31787982 + AluSx SINE Alu 1 304 -8 270 222 34 111 chr20 34880023 34880092 -31787913 - MIR SINE MIR -130 78 20 2667 178 47 2 chr20 34880164 34880637 -31787368 - MLT1D LTR MaLR -11 494 1 334 291 110 0 chr20 34880638 34880765 -31787240 - MIR SINE MIR -62 200 60 229 364 127 0 chr20 34881287 34881405 -31786600 - L2 LINE L2 -38 3234 3102 709 207 89 10 chr20 34881664 34881867 -31786138 + L2 LINE L2 2923 3141 -172 838 137 123 52 chr20 34881916 34882068 -31785937 - AluJo SINE Alu -2 310 137 2173 78 27 10 chr20 34882068 34882364 -31785641 - AluSc SINE Alu -8 301 1 838 137 123 52 chr20 34882364 34882422 -31785583 - AluJo SINE Alu -175 137 85 404 187 67 0 chr20 34882433 34882508 -31785497 + L2 LINE L2 3229 3308 -5 1533 125 90 35 chr20 34882572 34882861 -31785144 + AluJo SINE Alu 7 311 -1 234 357 10 0 chr20 34882865 34882963 -31785042 - L2 LINE L2 -815 2499 2401 192 291 0 18 chr20 34883682 34883737 -31784268 - L2 LINE L2 -9 3304 3251 711 310 61 58 chr20 34883811 34884156 -31783849 - L2 LINE L2 -1 3271 2926 231 61 0 0 chr20 34884329 34884362 -31783643 + (CA)n Simple_repeat Simple_repeat 2 34 0 2122 99 0 3 chr20 34885087 34885381 -31782624 + AluSx SINE Alu 12 304 -8 2222 103 0 3 chr20 34885923 34886224 -31781781 + AluSx SINE Alu 1 300 -12 377 306 65 69 chr20 34886281 34886542 -31781463 + L2 LINE L2 3006 3265 -7 531 306 125 53 chr20 34886546 34886639 -31781366 - L2 LINE L2 -22 3250 3165 258 32 0 0 chr20 34886639 34886670 -31781335 + (GGA)n Simple_repeat Simple_repeat 1 31 0 531 306 125 53 chr20 34886670 34886913 -31781092 - L2 LINE L2 -107 3165 2890 2314 83 3 0 chr20 34887467 34887767 -31780238 - AluSq SINE Alu -12 301 1 276 189 53 152 chr20 34887987 34888045 -31779960 - L1MC4 LINE L1 -6 8036 7974 204 40 0 0 chr20 34888045 34888070 -31779935 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1611 188 0 0 chr20 34888072 34888354 -31779651 - AluJo SINE Alu -30 282 1 276 189 53 152 chr20 34888354 34888424 -31779581 - L1MC4 LINE L1 -69 7973 7918 205 162 0 0 chr20 34888454 34888478 -31779527 + (TA)n Simple_repeat Simple_repeat 1 27 -10 2091 124 0 0 chr20 34888478 34888776 -31779229 - AluSx SINE Alu -14 298 1 205 162 0 0 chr20 34888776 34888788 -31779217 + (TA)n Simple_repeat Simple_repeat 26 37 0 368 163 12 47 chr20 34888851 34888937 -31779068 - L1MC4 LINE L1 -161 7881 7799 348 236 110 77 chr20 34888940 34889122 -31778883 - L1ME4a LINE L1 -126 5995 5808 2068 85 0 75 chr20 34889200 34889519 -31778486 + AluSc SINE Alu 1 295 -14 541 248 32 28 chr20 34890178 34890333 -31777672 + MIR3 SINE MIR 48 204 -4 194 214 24 0 chr20 34890413 34890455 -31777550 - L2 LINE L2 -1 3271 3229 186 319 144 64 chr20 34890533 34891145 -31776860 - L2 LINE L2 -1108 2206 1546 270 203 62 0 chr20 34891255 34891319 -31776686 + MIR3 SINE MIR 106 173 -35 2176 93 3 10 chr20 34891334 34891635 -31776370 - AluSx SINE Alu -13 299 1 196 196 59 0 chr20 34892203 34892254 -31775751 + MIR SINE MIR 78 131 -77 379 201 75 107 chr20 34892521 34892616 -31775389 + MIR SINE MIR 48 144 -118 2358 53 0 16 chr20 34892616 34892920 -31775085 - AluY SINE Alu -12 299 1 379 201 75 107 chr20 34892920 34892969 -31775036 + MIR SINE MIR 144 189 -73 1464 189 25 7 chr20 34892969 34893280 -31774725 - AluJb SINE Alu 0 312 1 379 201 75 107 chr20 34893280 34893293 -31774712 + MIR SINE MIR 189 201 -61 2210 115 0 10 chr20 34893306 34893620 -31774385 + AluSx SINE Alu 2 312 0 1604 135 157 22 chr20 34893620 34893929 -31774076 - MSTA LTR MaLR -33 395 40 279 311 84 34 chr20 34893944 34894063 -31773942 - L2 LINE L2 -12 3260 3136 1970 135 0 19 chr20 34894141 34894452 -31773553 - AluSq SINE Alu -8 305 1 230 265 29 0 chr20 34894452 34894511 -31773494 - L2 LINE L2 -523 2791 2728 356 293 43 35 chr20 34894538 34894716 -31773289 - MIR SINE MIR -51 211 31 534 138 11 11 chr20 34895378 34895472 -31772533 + AluJ/FRAM SINE Alu 214 307 -5 340 215 35 58 chr20 34895775 34895947 -31772058 + (CTGGGG)n Simple_repeat Simple_repeat 6 173 0 401 211 22 67 chr20 34895967 34896147 -31771858 + (CTGGGG)n Simple_repeat Simple_repeat 2 173 0 207 0 0 0 chr20 34896298 34896321 -31771684 + (T)n Simple_repeat Simple_repeat 1 23 0 276 257 99 48 chr20 34896486 34896612 -31771393 + MIR SINE MIR 23 172 -63 2276 87 3 0 chr20 34896896 34897196 -31770809 - AluSq SINE Alu -12 301 1 2331 91 0 0 chr20 34898076 34898372 -31769633 + AluSq SINE Alu 1 296 -17 391 176 15 0 chr20 34898789 34898857 -31769148 + MIR3 SINE MIR 119 187 -21 580 318 20 15 chr20 34899199 34899397 -31768608 - MIR SINE MIR -61 201 3 474 248 30 96 chr20 34899401 34899465 -31768540 - MER5A DNA MER1_type -3 186 119 2295 82 20 0 chr20 34899465 34899770 -31768235 + AluSq SINE Alu 1 311 -2 474 248 30 96 chr20 34899770 34899903 -31768102 - MER5A DNA MER1_type -70 119 2 218 303 11 34 chr20 34899918 34900007 -31767998 - MER5A DNA MER1_type -5 184 98 183 290 0 16 chr20 34899953 34900015 -31767990 + MER5A DNA MER1_type 50 110 -79 * 215 207 52 0 chr20 34900466 34900524 -31767481 - L2 LINE L2 -12 3301 3241 1186 265 75 30 chr20 34901061 34901810 -31766195 - L1MC5 LINE L1 -30 7931 7244 2148 82 0 4 chr20 34901949 34902229 -31765776 + AluSx SINE Alu 25 303 -9 199 286 36 36 chr20 34902279 34902363 -31765642 - MER5A DNA MER1_type -103 86 3 283 264 89 112 chr20 34902411 34902669 -31765336 - L2 LINE L2 -88 3184 2933 634 264 142 10 chr20 34902897 34903094 -31764911 - MIR SINE MIR -32 230 8 189 307 107 0 chr20 34903508 34903583 -31764422 - MIR SINE MIR -78 130 48 458 292 130 0 chr20 34904390 34904575 -31763430 - MIR SINE MIR -48 214 6 2278 98 0 3 chr20 34904823 34905129 -31762876 - AluSx SINE Alu -7 305 1 8069 57 1 0 chr20 34905151 34906119 -31761886 - LTR5 LTR ERVK 0 969 1 313 292 135 88 chr20 34906119 34906757 -31761248 + L2 LINE L2 2598 3272 0 224 307 0 13 chr20 34907228 34907303 -31760702 + CT-rich Low_complexity Low_complexity 1 74 0 2203 98 0 49 chr20 34907437 34907764 -31760241 + AluSx SINE Alu 1 311 -1 422 282 26 39 chr20 34908040 34908196 -31759809 - L2 LINE L2 -742 2572 2419 1988 75 4 4 chr20 34908226 34908481 -31759524 + AluSx SINE Alu 42 296 -16 23 97 0 0 chr20 34908550 34908622 -31759383 + AT_rich Low_complexity Low_complexity 1 72 0 910 83 0 56 chr20 34908622 34908766 -31759239 + AluJo SINE Alu 1 136 -176 512 183 0 67 chr20 34908810 34908930 -31759075 - MER3 DNA MER1_type -97 112 1 240 133 0 22 chr20 34908935 34908974 -31759031 - L2 LINE L2 -1100 2214 2177 525 193 20 139 chr20 34908974 34909085 -31758920 - MER5B DNA MER1_type 0 178 100 2125 98 0 50 chr20 34909085 34909403 -31758602 + AluSx SINE Alu 5 306 -6 525 193 20 139 chr20 34909403 34909493 -31758512 - MER5B DNA MER1_type -78 100 1 473 197 92 21 chr20 34909495 34909637 -31758368 - L2 LINE L2 -1132 2182 2031 574 238 143 36 chr20 34909663 34909831 -31758174 + MER5A DNA MER1_type 4 189 0 186 236 55 45 chr20 34909831 34909936 -31758069 - L2 LINE L2 -1417 1897 1792 199 342 59 0 chr20 34910701 34910803 -31757202 + MIR SINE MIR 87 193 -58 1007 304 65 12 chr20 34910973 34911391 -31756614 - LTR16A LTR ERVL 0 450 11 224 326 70 0 chr20 34911451 34911537 -31756468 + MIR SINE MIR 24 115 -93 215 191 22 101 chr20 34911683 34911772 -31756233 - MIR SINE MIR -69 193 112 2403 75 0 3 chr20 34911772 34912077 -31755928 + AluY SINE Alu 1 304 -7 218 380 0 0 chr20 34912177 34912256 -31755749 - MIR SINE MIR -5 257 179 188 293 12 61 chr20 34912966 34913048 -31754957 + MIR3 SINE MIR 111 188 -20 197 345 36 43 chr20 34913484 34913623 -31754382 - L2 LINE L2 -457 2857 2720 2204 105 0 0 chr20 34913785 34914079 -31753926 + AluSp SINE Alu 1 294 -19 1765 157 3 20 chr20 34915263 34915557 -31752448 - AluJo SINE Alu -15 297 9 623 281 81 30 chr20 34915747 34915982 -31752023 + MIR SINE MIR 15 261 -1 1907 138 0 14 chr20 34916166 34916448 -31751557 + AluJo SINE Alu 29 306 -6 194 327 118 20 chr20 34919369 34919522 -31748483 - MIR SINE MIR -14 248 81 515 81 8 73 chr20 34920797 34920921 -31747084 + (CTGGGG)n Simple_repeat Simple_repeat 2 117 0 21 0 0 0 chr20 34920933 34920954 -31747051 + GC_rich Low_complexity Low_complexity 1 21 0 804 135 32 0 chr20 34921507 34921633 -31746372 + AluJ SINE Alu 1 130 -172 719 186 0 0 chr20 34921634 34921758 -31746247 + AluJ SINE Alu 184 307 -5 2554 44 0 19 chr20 34924140 34924456 -31743549 + AluY SINE Alu 2 311 0 1052 240 26 58 chr20 34924457 34924492 -31743513 + L1ME3A LINE L1 5438 5473 -697 2014 133 3 3 chr20 34924492 34924786 -31743219 - AluSx SINE Alu -18 294 1 1052 240 26 58 chr20 34924786 34925031 -31742974 + L1ME3A LINE L1 5473 5703 -467 2384 70 0 3 chr20 34925031 34925329 -31742676 - AluY SINE Alu -14 297 1 1052 240 26 58 chr20 34925329 34925463 -31742542 + L1ME3A LINE L1 5703 5840 -330 1933 115 0 18 chr20 34925633 34925912 -31742093 - AluSp SINE Alu -1 312 39 26 50 0 0 chr20 34925923 34925963 -31742042 + AT_rich Low_complexity Low_complexity 1 40 0 197 306 20 41 chr20 34925976 34926050 -31741955 + L3 LINE CR1 1302 1375 -202 2179 79 26 10 chr20 34926050 34926355 -31741650 + AluSq SINE Alu 1 310 -3 197 306 20 41 chr20 34926355 34926378 -31741627 + L3 LINE CR1 1375 1397 -180 1730 195 0 3 chr20 34926558 34926865 -31741140 + AluJo SINE Alu 1 306 -6 263 331 87 8 chr20 34926884 34927011 -31740994 + MIR SINE MIR 76 212 -50 404 151 0 12 chr20 34928889 34928975 -31739030 + (ATG)n Simple_repeat Simple_repeat 1 85 0 189 260 62 83 chr20 34928999 34929191 -31738814 + L2 LINE L2 2872 3059 -213 288 0 0 0 chr20 34929395 34929427 -31738578 + (TG)n Simple_repeat Simple_repeat 2 33 0 201 277 92 0 chr20 34931211 34931276 -31736729 + MIR3 SINE MIR 117 187 -21 250 290 0 14 chr20 34931362 34931431 -31736574 + L2 LINE L2 3205 3272 0 1349 136 35 84 chr20 34932207 34932377 -31735628 - AluJo SINE Alu -17 295 143 2154 120 7 0 chr20 34932377 34932677 -31735328 - AluSg SINE Alu -8 302 1 1349 136 35 84 chr20 34932677 34932793 -31735212 - AluJo SINE Alu -169 143 23 558 303 30 6 chr20 34933413 34933578 -31734427 + MIR SINE MIR 31 199 -63 338 229 35 112 chr20 34934290 34934460 -31733545 + MIR3 SINE MIR 16 172 -36 483 187 37 0 chr20 34934716 34934823 -31733182 + MIR3 SINE MIR 52 162 -46 195 100 0 0 chr20 34935748 34935778 -31732227 + (CA)n Simple_repeat Simple_repeat 2 31 0 204 254 0 36 chr20 34936235 34936290 -31731715 - MER5A DNA MER1_type -46 143 91 1877 158 3 19 chr20 34936309 34936619 -31731386 - AluJo SINE Alu -7 305 1 533 194 0 20 chr20 34936620 34936718 -31731287 - FRAM SINE Alu -14 162 67 2561 148 29 65 chr20 34937741 34937794 -31730211 - L1MB3 LINE L1 -1 6182 6129 2123 115 0 13 chr20 34937794 34938099 -31729906 + AluSx SINE Alu 1 301 -11 779 168 0 0 chr20 34938099 34938218 -31729787 - AluJo/FLAM SINE Alu -183 119 1 2561 148 29 65 chr20 34938218 34938682 -31729323 - L1MB3 LINE L1 -52 6131 5683 206 289 10 21 chr20 34938823 34938920 -31729085 + (TG)n Simple_repeat Simple_repeat 1 96 0 370 324 108 0 chr20 34940070 34940274 -31727731 + MIR SINE MIR 28 253 -9 336 188 62 0 chr20 34940699 34940763 -31727242 - L2 LINE L2 -93 3179 3112 2299 93 0 10 chr20 34942335 34942646 -31725359 + AluSq SINE Alu 1 308 -5 22 0 0 0 chr20 34943855 34943877 -31724128 + AT_rich Low_complexity Low_complexity 1 22 0 1926 143 28 0 chr20 34943979 34944266 -31723739 - AluJo SINE Alu -17 295 1 383 326 58 35 chr20 34944610 34944782 -31723223 - L2 LINE L2 0 3272 3097 347 191 0 0 chr20 34944791 34944854 -31723151 + AluJ/FLAM SINE Alu 1 63 -239 456 323 12 18 chr20 34945287 34945451 -31722554 + L3 LINE CR1 1413 1575 -2 333 357 30 18 chr20 34947488 34947656 -31720349 + MIR SINE MIR 39 208 -54 272 299 159 45 chr20 34948105 34948306 -31719699 + L2 LINE L2 3044 3267 -5 182 242 91 0 chr20 34949066 34949132 -31718873 - L2 LINE L2 -2551 763 692 199 324 44 0 chr20 34949388 34949456 -31718549 + L2 LINE L2 3200 3270 -2 261 217 133 67 chr20 34949967 34950087 -31717918 - MIR3 SINE MIR -23 185 58 497 264 42 18 chr20 34950885 34951052 -31716953 + MIR SINE MIR 17 187 -75 2170 107 4 4 chr20 34951745 34952055 -31715950 - AluSx SINE Alu 0 310 1 217 184 41 0 chr20 34952057 34952106 -31715899 - MIR SINE MIR -114 148 98 1708 152 7 7 chr20 34952220 34952490 -31715515 + AluJb SINE Alu 30 299 -13 243 339 102 0 chr20 34952819 34952937 -31715068 - L2 LINE L2 -5 3308 3179 406 272 205 32 chr20 34953021 34953304 -31714701 + L2 LINE L2 2982 3313 0 2399 86 0 10 chr20 34953406 34953709 -31714296 + AluSc SINE Alu 4 303 -6 2315 89 0 20 chr20 34953734 34954038 -31713967 - AluY SINE Alu -13 298 1 723 157 216 0 chr20 34954406 34954559 -31713446 + MER3 DNA MER1_type 1 186 -23 410 250 167 0 chr20 34954584 34954728 -31713277 + MER5A DNA MER1_type 9 176 -13 483 190 74 16 chr20 34954748 34954869 -31713136 + MER5B DNA MER1_type 21 148 -30 1925 118 19 19 chr20 34955793 34956116 -31711889 + L1MB3 LINE L1 5847 6169 -14 2610 66 0 0 chr20 34956135 34956440 -31711565 + AluY SINE Alu 1 305 -6 346 264 23 39 chr20 34956440 34956558 -31711447 + L1MC4a LINE L1 5822 5939 -1869 1889 123 42 21 chr20 34956664 34956948 -31711057 - AluSx SINE Alu -22 290 1 2159 101 44 0 chr20 34956995 34957292 -31710713 - AluSx SINE Alu -2 310 1 308 242 64 70 chr20 34958219 34958376 -31709629 - L2 LINE L2 -209 3063 2908 2011 121 21 3 chr20 34958649 34958939 -31709066 + AluJb SINE Alu 1 295 -17 341 254 88 18 chr20 34959372 34959486 -31708519 - MIR3 SINE MIR -86 122 1 211 356 0 33 chr20 34959579 34959669 -31708336 + MIR SINE MIR 17 103 -105 2428 77 0 0 chr20 34959680 34959978 -31708027 - AluY SINE Alu -13 298 1 2341 84 0 7 chr20 34959980 34960278 -31707727 - AluSx SINE Alu -16 296 1 319 296 45 23 chr20 34960665 34960797 -31707208 + L2 LINE L2 3138 3272 0 499 285 97 0 chr20 34961245 34961410 -31706595 - MIR3 SINE MIR -24 184 4 455 310 98 10 chr20 34963284 34963487 -31704518 - MIR SINE MIR -8 254 34 234 0 0 0 chr20 34964293 34964319 -31703686 + (TG)n Simple_repeat Simple_repeat 1 26 0 654 217 0 0 chr20 34964608 34964728 -31703277 + FLAM_C SINE Alu 2 121 -22 344 217 5 162 chr20 34965371 34965486 -31702519 - MIR SINE MIR -64 198 125 2123 123 10 3 chr20 34965486 34965796 -31702209 + AluSx SINE Alu 1 312 0 344 217 5 162 chr20 34965796 34965878 -31702127 - MIR SINE MIR -137 125 32 2509 58 0 0 chr20 34965887 34966181 -31701824 - AluY SINE Alu -17 294 1 753 199 0 0 chr20 34967007 34967138 -31700867 + FLAM_C SINE Alu 1 131 -2 225 322 78 11 chr20 34967224 34967314 -31700691 + LTR67 LTR ERVL 429 524 -33 * 389 96 0 0 chr20 34967306 34967358 -31700647 - AluSg/x SINE Alu -117 185 134 2452 73 0 0 chr20 34967358 34967660 -31700345 - AluY SINE Alu -9 302 1 3943 162 22 23 chr20 34967677 34968406 -31699599 + L1MB4 LINE L1 5450 6177 -3 311 361 66 0 chr20 34968589 34968711 -31699294 - L2 LINE L2 -9 3263 3134 180 143 0 0 chr20 34968885 34968927 -31699078 + (A)n Simple_repeat Simple_repeat 1 42 0 342 281 26 35 chr20 34970449 34970563 -31697442 - MIR SINE MIR -75 133 21 2196 123 3 7 chr20 34970752 34971062 -31696943 + AluSx SINE Alu 1 309 -3 639 219 71 71 chr20 34971461 34971685 -31696320 - MIR SINE MIR -37 225 2 316 270 60 0 chr20 34972131 34972231 -31695774 - L2 LINE L2 -9 3304 3199 295 172 31 16 chr20 34973084 34973148 -31694857 - L2 LINE L2 0 3313 3249 221 311 66 28 chr20 34973301 34973407 -31694598 + MIR3 SINE MIR 58 167 -41 22 0 0 0 chr20 34974429 34974451 -31693554 + AT_rich Low_complexity Low_complexity 1 22 0 254 301 90 38 chr20 34974719 34974852 -31693153 - L2 LINE L2 -8 3264 3125 432 279 169 10 chr20 34974912 34975113 -31692892 - MIR SINE MIR -2 260 28 429 299 40 11 chr20 34976188 34976365 -31691640 + MIR SINE MIR 59 240 -22 347 311 187 42 chr20 34977473 34977762 -31690243 + L2 LINE L2 2922 3252 -20 211 238 350 0 chr20 34977888 34977968 -31690037 - MIR3 SINE MIR -4 204 97 1054 191 37 25 chr20 34978229 34978470 -31689535 + L1MB7 LINE L1 5585 5828 -356 1669 165 106 3 chr20 34978520 34978859 -31689146 + L1MB7 LINE L1 5811 6184 0 647 173 63 24 chr20 34978931 34979058 -31688947 + AluJb SINE Alu 2 133 -179 343 284 39 10 chr20 34979195 34979297 -31688708 + MIR SINE MIR 4 108 -154 1955 203 96 36 chr20 34979304 34979773 -31688232 + MLT1D LTR MaLR 4 500 -5 414 227 60 40 chr20 34979773 34979923 -31688082 + MIR SINE MIR 110 262 0 544 162 61 74 chr20 34980144 34980223 -31687782 - MER5A DNA MER1_type -36 153 75 2284 117 0 0 chr20 34980223 34980521 -31687484 - AluSg SINE Alu -12 298 1 544 162 61 74 chr20 34980521 34980589 -31687416 - MER5A DNA MER1_type -114 75 8 461 298 7 14 chr20 34981425 34981566 -31686439 + MIR3 SINE MIR 16 155 -53 2175 107 6 22 chr20 34981599 34981916 -31686089 + AluSx SINE Alu 1 312 0 27 0 0 0 chr20 34981916 34981943 -31686062 + AT_rich Low_complexity Low_complexity 1 27 0 215 344 147 6 chr20 34982424 34982587 -31685418 - L2 LINE L2 -222 3050 2865 321 136 80 57 chr20 34982782 34982870 -31685135 + L1MC4 LINE L1 7867 7956 -86 542 195 54 27 chr20 34982896 34983045 -31684960 - L1MC4 LINE L1 -97 7945 7793 881 221 23 0 chr20 34983557 34983729 -31684276 - AluJo SINE Alu -50 262 87 2155 92 33 10 chr20 34983978 34984281 -31683724 + AluSx SINE Alu 1 310 -2 224 128 0 26 chr20 34984900 34984939 -31683066 - L2 LINE L2 -20 3252 3215 457 241 163 14 chr20 34986810 34986951 -31681054 + MER5A DNA MER1_type 28 189 0 4503 176 53 9 chr20 34987728 34988544 -31679461 + MER21B LTR ERV1 1 852 -11 1919 81 231 191 chr20 34989023 34989582 -31678423 + LTR12 LTR ERV1 1 581 -133 22 0 0 0 chr20 34989655 34989677 -31678328 + AT_rich Low_complexity Low_complexity 1 22 0 590 258 0 20 chr20 34990447 34990598 -31677407 - L1ME3 LINE L1 -3 6159 6012 225 296 61 10 chr20 34990634 34990732 -31677273 - MIR3 SINE MIR -52 156 54 1292 154 137 7 chr20 34990732 34991017 -31676988 + MER33 DNA MER1_type 1 322 -2 384 258 93 33 chr20 34991046 34991197 -31676808 + L2 LINE L2 3154 3313 0 21 0 0 0 chr20 34991316 34991337 -31676668 + AT_rich Low_complexity Low_complexity 1 21 0 2015 76 4 4 chr20 34991406 34991691 -31676314 - AluY SINE Alu 0 317 33 1751 173 3 7 chr20 34991693 34991988 -31676017 - AluJb SINE Alu -17 295 2 1031 328 59 15 chr20 34992179 34992634 -31675371 + L3 LINE CR1 630 1104 -473 1721 177 18 0 chr20 34992750 34993057 -31674948 + AluJb SINE Alu 1 312 0 934 200 0 12 chr20 34993161 34993326 -31674679 - FRAM SINE Alu -3 163 1 2148 116 10 0 chr20 34993449 34993741 -31674264 + AluSx SINE Alu 1 295 -17 2201 116 0 7 chr20 34993793 34994096 -31673909 + AluSx SINE Alu 1 301 -11 2294 117 0 3 chr20 34994143 34994443 -31673562 + AluSx SINE Alu 1 299 -13 623 162 20 0 chr20 34995561 34995660 -31672345 + Tigger3(Golem) DNA MER2_type 2 102 -2927 3340 130 112 60 chr20 34995663 34995720 -31672285 + Tigger3(Golem) DNA MER2_type 2287 2340 -689 1739 167 20 10 chr20 34995720 34996014 -31671991 - AluJo SINE Alu -15 297 1 3340 130 112 60 chr20 34996014 34996155 -31671850 + Tigger3(Golem) DNA MER2_type 2340 2472 -557 2184 113 24 0 chr20 34996155 34996446 -31671559 + AluSx SINE Alu 1 298 -14 3340 130 112 60 chr20 34996446 34996543 -31671462 + Tigger3(Golem) DNA MER2_type 2472 2562 -467 1781 183 3 7 chr20 34996543 34996838 -31671167 + AluJb SINE Alu 1 294 -18 3340 130 112 60 chr20 34996838 34997246 -31670759 + Tigger3(Golem) DNA MER2_type 2562 3029 0 2473 73 3 0 chr20 34997426 34997729 -31670276 - AluY SINE Alu -7 304 1 1319 125 19 5 chr20 34997814 34998030 -31669975 - MER6 DNA MER2_type -2 863 645 1312 198 0 8 chr20 34998039 34998276 -31669729 - MER6 DNA MER2_type -629 236 2 2034 145 0 16 chr20 34998919 34999223 -31668782 - AluJb SINE Alu -13 299 1 867 264 44 26 chr20 34999520 34999747 -31668258 - MIR SINE MIR -4 258 28 1961 151 16 13 chr20 35000137 35000273 -31667732 + AluJb SINE Alu 1 135 -177 2259 87 7 0 chr20 35000273 35000562 -31667443 + AluSx SINE Alu 1 291 -21 1961 151 16 13 chr20 35000562 35000736 -31667269 + AluJb SINE Alu 135 312 0 2343 97 0 7 chr20 35001106 35001415 -31666590 + AluSq SINE Alu 1 307 -6 2076 102 0 0 chr20 35001629 35001894 -31666111 - AluSq SINE Alu -48 265 1 227 287 101 36 chr20 35002266 35002398 -31665607 - MIR SINE MIR -62 146 27 189 236 0 55 chr20 35003813 35003868 -31664137 + L2 LINE L2 3210 3261 -11 300 303 106 0 chr20 35003990 35004122 -31663883 + MIR3 SINE MIR 59 204 -4 446 239 30 67 chr20 35004282 35004416 -31663589 + L2 LINE L2 2949 3077 -195 336 296 62 51 chr20 35004700 35004876 -31663129 + MIR SINE MIR 37 214 -48 349 303 27 0 chr20 35005128 35005251 -31662754 - L2 LINE L2 -221 3051 2929 2104 122 3 7 chr20 35005389 35005693 -31662312 - AluSx SINE Alu -9 303 1 198 150 0 0 chr20 35005736 35005776 -31662229 + (TG)n Simple_repeat Simple_repeat 2 41 0 352 168 148 50 chr20 35005842 35005943 -31662062 - MER112 DNA MER1_type -12 248 138 * 675 97 8 73 chr20 35005940 35006064 -31661941 + LTR9B LTR ERV1 445 560 -84 316 252 97 26 chr20 35006072 35006227 -31661778 - MER112 DNA MER1_type -83 177 12 357 364 41 5 chr20 35007086 35007281 -31660724 + L2 LINE L2 2844 3045 -227 22 0 0 0 chr20 35007853 35007875 -31660130 + AT_rich Low_complexity Low_complexity 1 22 0 273 290 0 29 chr20 35008263 35008332 -31659673 + L2 LINE L2 3107 3173 -99 2049 147 0 6 chr20 35008407 35008720 -31659285 + AluSx SINE Alu 1 311 -1 2343 105 0 0 chr20 35009850 35010156 -31657849 + AluSx SINE Alu 5 310 -2 622 236 50 7 chr20 35010171 35010311 -31657694 + MIR3 SINE MIR 38 183 -25 1905 171 0 3 chr20 35010511 35010820 -31657185 + AluJb SINE Alu 1 308 -4 775 275 20 59 chr20 35011289 35011558 -31656447 - MIR SINE MIR 0 262 6 466 288 84 28 chr20 35011573 35011788 -31656217 - MIR SINE MIR -6 256 30 531 291 108 25 chr20 35012566 35012807 -31655198 + MIR SINE MIR 2 262 0 692 129 147 0 chr20 35013265 35013381 -31654624 - FLAM_C SINE Alu 0 133 1 21 57 0 0 chr20 35013811 35013846 -31654159 + AT_rich Low_complexity Low_complexity 1 35 0 267 301 150 26 chr20 35013885 35013998 -31654007 + MIR SINE MIR 1 127 -135 2204 95 27 7 chr20 35014370 35014666 -31653339 - AluSx SINE Alu -10 302 1 213 39 0 0 chr20 35014730 35014756 -31653249 + (A)n Simple_repeat Simple_repeat 1 26 0 1491 164 30 56 chr20 35014758 35015062 -31652943 + AluJo SINE Alu 1 296 -16 2381 92 10 7 chr20 35015064 35015370 -31652635 + AluSg SINE Alu 1 307 -3 1674 153 3 47 chr20 35015614 35015915 -31652090 + AluSx SINE Alu 1 288 -24 264 265 51 31 chr20 35016216 35016314 -31651691 + L1ME LINE L1 5531 5630 -491 21 36 0 0 chr20 35016348 35016376 -31651629 + AT_rich Low_complexity Low_complexity 1 28 0 2195 109 0 29 chr20 35016431 35016742 -31651263 + AluSx SINE Alu 1 302 -10 732 181 0 31 chr20 35016923 35017050 -31650955 + FLAM_A SINE Alu 1 123 -10 318 206 0 0 chr20 35017930 35017993 -31650012 + L1ME3 LINE L1 6098 6160 -2 2344 207 29 92 chr20 35018586 35018703 -31649302 + L1M4 LINE L1 3075 3198 -2948 1848 160 16 10 chr20 35018703 35019010 -31648995 + AluJb SINE Alu 1 309 -3 2344 207 29 92 chr20 35019010 35019078 -31648927 + L1M4 LINE L1 3198 3269 -2877 2102 88 18 0 chr20 35019078 35019352 -31648653 + AluSx SINE Alu 14 292 -20 2344 207 29 92 chr20 35019352 35019717 -31648288 + L1M4 LINE L1 3269 3555 -2591 2174 96 45 0 chr20 35019717 35020038 -31647967 + AluSc SINE Alu 1 309 0 2344 207 29 92 chr20 35020038 35020346 -31647659 + L1M4 LINE L1 3555 3881 -2265 490 246 25 17 chr20 35020540 35020658 -31647347 - L2 LINE L2 -5 3308 3190 2266 73 0 57 chr20 35021366 35021680 -31646325 + AluSg SINE Alu 1 296 -14 855 263 177 28 chr20 35021680 35022076 -31645929 - L3 LINE CR1 -20 1557 1103 2107 115 0 7 chr20 35022556 35022877 -31645128 + AluSx SINE Alu 1 319 0 1128 190 77 9 chr20 35023813 35024034 -31643971 - MER46A DNA MER2_type 0 236 1 949 122 0 186 chr20 35024604 35024841 -31643164 - 7SK RNA RNA 0 193 1 1669 149 0 118 chr20 35025144 35025473 -31642532 - AluJo SINE Alu -10 292 3 2571 48 10 3 chr20 35025535 35025844 -31642161 - AluY SINE Alu 0 311 1 826 156 12 75 chr20 35026458 35026618 -31641387 + FRAM SINE Alu 5 154 -12 1525 181 4 7 chr20 35026628 35026898 -31641107 + AluJo SINE Alu 27 295 -17 322 177 13 63 chr20 35026907 35026986 -31641019 + MIR SINE MIR 67 141 -67 317 254 0 0 chr20 35027314 35027377 -31640628 + L2 LINE L2 3250 3312 -1 1663 180 3 26 chr20 35027393 35027698 -31640307 + AluJo SINE Alu 1 298 -14 2230 116 10 3 chr20 35027721 35028031 -31639974 + AluSx SINE Alu 1 312 0 215 219 219 0 chr20 35028217 35028290 -31639715 + MIR SINE MIR 161 249 -13 1671 158 3 58 chr20 35028524 35028854 -31639151 - AluJb SINE Alu 0 312 1 1072 182 27 31 chr20 35028866 35029091 -31638914 - L1MC1 LINE L1 0 6333 6110 2110 123 0 28 chr20 35030029 35030347 -31637658 + AluSx SINE Alu 1 309 -3 189 325 87 79 chr20 35030412 35030538 -31637467 + L2 LINE L2 3126 3252 -20 348 293 8 24 chr20 35030569 35030692 -31637313 + L3b LINE CR1 1112 1232 -351 416 281 0 0 chr20 35030723 35030819 -31637186 - MIR3 SINE MIR -24 184 89 239 321 37 43 chr20 35030913 35031014 -31636991 - MIR SINE MIR 0 262 162 2055 126 13 7 chr20 35031014 35031316 -31636689 - AluSx SINE Alu -8 304 1 1702 167 49 3 chr20 35031322 35031610 -31636395 - AluJo SINE Alu -9 303 3 239 321 37 43 chr20 35031610 35031663 -31636342 - MIR SINE MIR -105 157 102 1538 171 127 109 chr20 35031759 35031817 -31636188 + L1MC4a LINE L1 6675 6731 -1077 2264 106 3 6 chr20 35031817 35032128 -31635877 + AluSx SINE Alu 1 310 -2 1538 171 127 109 chr20 35032128 35032353 -31635652 + L1MC4a LINE L1 6731 6951 -857 1778 106 4 4 chr20 35032353 35032627 -31635378 + AluSg SINE Alu 37 310 0 1538 171 127 109 chr20 35032627 35032674 -31635331 + L1MC4a LINE L1 6951 6996 -812 216 67 0 0 chr20 35032674 35032704 -31635301 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 1538 171 127 109 chr20 35032704 35032827 -31635178 + L1MC4a LINE L1 6996 7139 -669 * 2381 135 89 61 chr20 35032823 35033178 -31634827 + L1MB2 LINE L1 5604 5980 -191 2310 88 14 0 chr20 35033178 35033473 -31634532 + AluSx SINE Alu 1 299 -13 2381 135 89 61 chr20 35033473 35033644 -31634361 + L1MB2 LINE L1 5980 6145 -26 2301 173 92 98 chr20 35033657 35033956 -31634049 + L1MC4a LINE L1 7126 7425 -383 2068 133 7 0 chr20 35033956 35034256 -31633749 + AluSx SINE Alu 9 310 -2 2301 173 92 98 chr20 35034256 35034374 -31633631 + L1MC4a LINE L1 7425 7542 -266 1801 147 6 45 chr20 35034374 35034687 -31633318 + AluSx SINE Alu 1 301 -11 2301 173 92 98 chr20 35034687 35034955 -31633050 + L1MC4a LINE L1 7542 7808 0 527 333 22 17 chr20 35035030 35035261 -31632744 - L3 LINE CR1 -5 1572 1341 296 253 40 13 chr20 35035435 35035510 -31632495 + L2 LINE L2 3227 3303 -10 244 254 60 0 chr20 35035695 35035762 -31632243 - L2 LINE L2 -1 3271 3201 25 0 0 0 chr20 35035842 35035867 -31632138 + AT_rich Low_complexity Low_complexity 1 25 0 234 161 18 89 chr20 35036157 35036213 -31631792 + L1ME LINE L1 5529 5580 -590 510 70 0 0 chr20 35036498 35036569 -31631436 + (CA)n Simple_repeat Simple_repeat 2 72 0 1195 215 35 92 chr20 35037310 35037678 -31630327 + MER21B LTR ERV1 1 347 -516 2129 238 82 33 chr20 35037706 35038336 -31629669 - MER21B LTR ERV1 -60 803 143 602 157 28 19 chr20 35038390 35038498 -31629507 + FLAM_C SINE Alu 17 125 -18 25 0 0 0 chr20 35038531 35038556 -31629449 + AT_rich Low_complexity Low_complexity 1 25 0 458 133 78 78 chr20 35038567 35038657 -31629348 - MER21B LTR ERV1 -773 90 1 2058 158 0 0 chr20 35039015 35039319 -31628686 - AluSx SINE Alu -8 304 1 1052 155 6 39 chr20 35039326 35039507 -31628498 - FAM SINE Alu 0 175 1 414 174 14 0 chr20 35040009 35040078 -31627927 - MER2 DNA MER2_type 0 345 276 1230 108 5 16 chr20 35040079 35040265 -31627740 + AluSg/x SINE Alu 127 310 0 2518 61 7 3 chr20 35040268 35040578 -31627427 + AluY SINE Alu 1 311 0 1496 176 52 4 chr20 35040580 35040847 -31627158 - MER2 DNA MER2_type -65 280 1 207 303 146 0 chr20 35040848 35040937 -31627068 + MIR SINE MIR 32 133 -75 847 251 48 4 chr20 35040940 35041171 -31626834 - MIR SINE MIR 0 262 22 253 258 91 0 chr20 35041165 35041231 -31626774 + MIR3 SINE MIR 126 197 -11 * 360 235 126 0 chr20 35042060 35042179 -31625826 + MIR SINE MIR 50 183 -79 2302 91 3 7 chr20 35042608 35042915 -31625090 + AluSx SINE Alu 1 306 -6 2308 98 0 0 chr20 35042960 35043255 -31624750 - AluSx SINE Alu -12 300 6 2540 63 0 0 chr20 35043526 35043829 -31624176 - AluY SINE Alu -8 303 1 3269 202 26 3 chr20 35044060 35044675 -31623330 + MER82 DNA MER2_type 24 652 -1 2506 76 3 0 chr20 35044693 35044995 -31623010 - AluSp SINE Alu -10 303 1 2005 118 3 29 chr20 35045195 35045331 -31622674 + AluSx SINE Alu 1 139 -173 2497 49 0 0 chr20 35045331 35045650 -31622355 + AluY SINE Alu 1 319 0 194 0 39 0 chr20 35045650 35045676 -31622329 + (TA)n Simple_repeat Simple_repeat 1 27 0 2005 118 3 29 chr20 35045676 35045843 -31622162 + AluSx SINE Alu 137 298 -14 1890 118 0 7 chr20 35045848 35046119 -31621886 + AluSx SINE Alu 31 299 -13 495 243 92 8 chr20 35046184 35046345 -31621660 + L1MC4 LINE L1 6439 6619 -1418 241 148 0 82 chr20 35046345 35046406 -31621599 - LTR66 LTR ERVL -161 449 394 498 173 71 16 chr20 35046409 35046536 -31621469 + L1MC4a LINE L1 6635 6768 -1040 4575 42 0 24 chr20 35046575 35046990 -31621015 + L1PA5 LINE L1 5622 6022 -132 2387 56 0 43 chr20 35046990 35047134 -31620871 + AluY SINE Alu 1 127 -184 2415 45 41 3 chr20 35047134 35047425 -31620580 + AluY SINE Alu 1 302 -9 2387 56 0 43 chr20 35047425 35047584 -31620421 + AluY SINE Alu 127 291 -20 4575 42 0 24 chr20 35047584 35047711 -31620294 + L1PA5 LINE L1 6022 6151 -3 5262 182 94 75 chr20 35047736 35048640 -31619365 + L1M4 LINE L1 335 1220 -5426 2014 74 0 0 chr20 35048640 35048883 -31619122 + AluSq SINE Alu 1 243 -70 5262 182 94 75 chr20 35048883 35050024 -31617981 + L1M4 LINE L1 1220 2487 -4159 1087 253 48 0 chr20 35050031 35050180 -31617825 + L1MB3 LINE L1 4973 5113 -1033 2094 140 6 19 chr20 35050180 35050495 -31617510 + AluSx SINE Alu 1 311 -1 1087 253 48 0 chr20 35050495 35050638 -31617367 + L1MB3 LINE L1 5113 5279 -867 1315 160 0 9 chr20 35050639 35050775 -31617230 + AluSx SINE Alu 2 135 -177 2297 102 3 0 chr20 35050775 35051069 -31616936 + AluSp SINE Alu 1 295 -18 1213 179 5 5 chr20 35051070 35051181 -31616824 + L1MB3 LINE L1 5381 5491 -692 1847 193 3 0 chr20 35051181 35051492 -31616513 + AluJo SINE Alu 1 312 0 1213 179 5 5 chr20 35051492 35051603 -31616402 + L1MB3 LINE L1 5490 5603 -580 2001 148 3 10 chr20 35051605 35051910 -31616095 + AluJo SINE Alu 1 303 -9 1970 136 20 31 chr20 35051910 35052221 -31615784 + L1MB3 LINE L1 5828 6136 -47 2374 100 0 3 chr20 35052221 35052521 -31615484 + AluSq SINE Alu 1 299 -14 1970 136 20 31 chr20 35052521 35052562 -31615443 + L1MB3 LINE L1 6136 6176 -7 2239 112 3 0 chr20 35052844 35053140 -31614865 - AluSq SINE Alu -16 297 1 497 221 121 21 chr20 35053146 35053286 -31614719 + MIR SINE MIR 107 260 -2 2329 106 0 0 chr20 35053286 35053588 -31614417 + AluSg SINE Alu 1 302 -8 1176 119 6 17 chr20 35053588 35053764 -31614241 + AluSg/x SINE Alu 134 307 -5 198 0 0 0 chr20 35053790 35053812 -31614193 + (A)n Simple_repeat Simple_repeat 1 22 0 400 314 51 0 chr20 35054344 35054462 -31613543 - L2 LINE L2 0 3313 3190 471 247 123 19 chr20 35054524 35054686 -31613319 - MIR3 SINE MIR -15 193 15 2084 49 111 28 chr20 35055394 35055682 -31612323 + AluSx SINE Alu 1 312 0 2385 82 3 10 chr20 35055870 35056173 -31611832 + AluSx SINE Alu 1 301 -11 310 287 64 0 chr20 35056468 35056562 -31611443 - L2 LINE L2 -235 3078 2979 22 0 0 0 chr20 35056575 35056597 -31611408 + AT_rich Low_complexity Low_complexity 1 22 0 4623 134 77 47 chr20 35056599 35056643 -31611362 - L1MA8 LINE L1 -2 6289 6248 2302 114 3 0 chr20 35056643 35056950 -31611055 - AluSq SINE Alu -1 312 5 4623 134 77 47 chr20 35056950 35057126 -31610879 - L1MA8 LINE L1 -43 6248 6079 2222 61 8 0 chr20 35057126 35057389 -31610616 - AluSp SINE Alu -14 299 35 4623 134 77 47 chr20 35057389 35057603 -31610402 - L1MA8 LINE L1 -212 6079 5873 2279 119 7 0 chr20 35057603 35057906 -31610099 - AluSp SINE Alu -8 305 1 4623 134 77 47 chr20 35057906 35057960 -31610045 - L1MA8 LINE L1 -418 5873 5822 2196 135 0 0 chr20 35057960 35058256 -31609749 - AluSx SINE Alu -16 296 1 4623 134 77 47 chr20 35058256 35058287 -31609718 - L1MA8 LINE L1 -469 5822 5793 2441 98 3 0 chr20 35058287 35058593 -31609412 - AluSc SINE Alu -2 307 1 4623 134 77 47 chr20 35058593 35059322 -31608683 - L1MA8 LINE L1 -498 5793 4978 1820 171 0 27 chr20 35059322 35059621 -31608384 - AluJo SINE Alu -21 291 1 4623 134 77 47 chr20 35059621 35059819 -31608186 - L1MA8 LINE L1 -1313 4978 4787 1059 106 0 20 chr20 35059918 35060069 -31607936 + AluJb SINE Alu 1 148 -164 2181 93 0 0 chr20 35060075 35060344 -31607661 - AluSg SINE Alu -41 269 1 727 159 0 0 chr20 35060356 35060469 -31607536 - FLAM_A SINE Alu -21 121 9 1848 155 3 14 chr20 35060535 35060826 -31607179 + AluJb SINE Alu 1 288 -24 23 0 0 0 chr20 35060833 35060856 -31607149 + AT_rich Low_complexity Low_complexity 1 23 0 2324 106 0 0 chr20 35060866 35061178 -31606827 - AluSx SINE Alu 0 312 1 297 352 19 0 chr20 35061231 35061336 -31606669 - L2 LINE L2 -2911 403 297 786 197 0 0 chr20 35061608 35061740 -31606265 + AluJo/FLAM SINE Alu 2 133 -179 453 100 143 0 chr20 35061740 35061810 -31606195 - AluY SINE Alu -17 294 215 1880 155 13 35 chr20 35061810 35062024 -31605981 + L1MB8 LINE L1 5568 5772 -406 2196 80 23 30 chr20 35062024 35062324 -31605681 + AluSq SINE Alu 1 298 -15 1880 155 13 35 chr20 35062324 35062483 -31605522 + L1MB8 LINE L1 5772 5933 -245 384 352 120 26 chr20 35062489 35062907 -31605098 + L2 LINE L2 781 1237 -2077 1049 251 18 11 chr20 35062958 35063233 -31604772 - MLT1C LTR MaLR -3 464 188 2371 105 3 0 chr20 35063249 35063553 -31604452 - AluSg SINE Alu -5 305 1 247 290 30 20 chr20 35063553 35063643 -31604362 + L2 LINE L2 2527 2620 -694 326 256 90 77 chr20 35063654 35063801 -31604204 - L2 LINE L2 -317 2996 2852 2572 62 0 0 chr20 35063801 35064106 -31603899 + AluY SINE Alu 1 305 -6 326 256 90 77 chr20 35064106 35064174 -31603831 - L2 LINE L2 -461 2852 2786 189 0 0 0 chr20 35064174 35064195 -31603810 + (TTTTA)n Simple_repeat Simple_repeat 1 21 0 326 256 90 77 chr20 35064195 35064257 -31603748 - L2 LINE L2 -527 2786 2661 2216 88 0 69 chr20 35064709 35065027 -31602978 - AluSx SINE Alu -16 296 1 1807 171 7 3 chr20 35065034 35065326 -31602679 - AluJo SINE Alu -19 293 1 2222 130 0 0 chr20 35065337 35065637 -31602368 - AluSx SINE Alu -12 300 1 2325 123 3 0 chr20 35065899 35066209 -31601796 + AluSx SINE Alu 1 311 -1 1605 150 49 0 chr20 35066629 35066875 -31601130 - AluSx SINE Alu -24 288 31 1509 164 4 16 chr20 35066875 35067124 -31600881 + AluJo SINE Alu 51 297 -15 2290 118 0 6 chr20 35067127 35067442 -31600563 + AluSq SINE Alu 1 313 0 182 349 0 16 chr20 35067451 35067514 -31600491 + L2 LINE L2 3121 3182 -90 1592 141 18 14 chr20 35067597 35067874 -31600131 + L1MB2 LINE L1 5894 6171 0 2351 111 0 0 chr20 35068019 35068326 -31599679 + AluSq SINE Alu 1 307 -6 23 33 0 0 chr20 35068497 35068527 -31599478 + AT_rich Low_complexity Low_complexity 1 30 0 1725 203 7 45 chr20 35068859 35069040 -31598965 + MSTD LTR MaLR 1 187 -209 2126 89 7 18 chr20 35069040 35069350 -31598655 - AluSg SINE Alu 0 307 1 1725 203 7 45 chr20 35069350 35069587 -31598418 + MSTD LTR MaLR 187 396 0 185 246 53 35 chr20 35069596 35069653 -31598352 + L2 LINE L2 2991 3048 -224 1179 178 66 0 chr20 35069761 35069974 -31598031 - AluJo SINE Alu 0 312 86 2255 117 0 0 chr20 35069976 35070275 -31597730 - AluSx SINE Alu -13 299 1 2565 75 0 0 chr20 35070284 35070590 -31597415 - AluY SINE Alu -5 306 1 691 268 19 19 chr20 35070680 35070885 -31597120 - MIR SINE MIR -30 232 28 188 281 18 18 chr20 35070897 35070954 -31597051 - MIR3 SINE MIR -17 191 135 2159 135 3 6 chr20 35071039 35071350 -31596655 - AluSx SINE Alu -2 310 1 1876 162 0 17 chr20 35071352 35071649 -31596356 - AluJb SINE Alu -16 296 5 442 196 62 10 chr20 35071767 35071864 -31596141 + MIR SINE MIR 128 229 -33 614 280 149 90 chr20 35071916 35071980 -31596025 - L3 LINE CR1 -255 1322 1263 2286 89 27 0 chr20 35071980 35072272 -31595733 - AluSg SINE Alu -10 300 1 614 280 149 90 chr20 35072272 35072764 -31595241 - L3 LINE CR1 -314 1263 733 210 253 160 0 chr20 35072784 35072859 -31595146 + MIR SINE MIR 166 252 -10 262 197 106 45 chr20 35072880 35072946 -31595059 + L2 LINE L2 3244 3313 0 612 237 0 53 chr20 35073014 35073166 -31594839 - MIR SINE MIR -111 151 8 2147 133 0 13 chr20 35073544 35073853 -31594152 + AluSx SINE Alu 1 305 -7 1438 163 93 53 chr20 35073860 35074160 -31593845 + AluJo SINE Alu 1 312 0 257 255 8 8 chr20 35074186 35074253 -31593752 + MIR SINE MIR 100 150 -58 458 276 102 76 chr20 35074282 35074507 -31593498 - MIR SINE MIR -1 261 31 2143 141 0 3 chr20 35078198 35078510 -31589495 + AluJb SINE Alu 1 311 -1 238 298 0 0 chr20 35078517 35078574 -31589431 - MIR SINE MIR -67 141 85 428 167 0 98 chr20 35078624 35078726 -31589279 - MIR SINE MIR -85 123 32 358 361 0 0 chr20 35078920 35079078 -31588927 + (TG)n Simple_repeat Simple_repeat 1 158 0 391 257 43 14 chr20 35079419 35079559 -31588446 - MIR3 SINE MIR -6 202 59 447 269 23 23 chr20 35079639 35079769 -31588236 - MIR3 SINE MIR -5 203 74 350 263 125 31 chr20 35079974 35080134 -31587871 + MIR3 SINE MIR 16 190 -18 192 77 0 0 chr20 35081039 35081065 -31586940 + (CAG)n Simple_repeat Simple_repeat 2 27 0 417 20 0 0 chr20 35081370 35081420 -31586585 + (CA)n Simple_repeat Simple_repeat 1 50 0 708 86 0 0 chr20 35081845 35081950 -31586055 + (TG)n Simple_repeat Simple_repeat 2 106 0 2307 73 35 0 chr20 35082274 35082563 -31585442 - AluY SINE Alu -11 300 2 329 359 14 21 chr20 35082726 35082868 -31585137 + L2 LINE L2 2944 3084 -188 2300 109 0 0 chr20 35082943 35083237 -31584768 - AluSx SINE Alu 0 312 19 252 61 0 0 chr20 35083237 35083270 -31584735 + AluYa5 SINE Alu 112 144 -157 538 178 0 0 chr20 35083270 35083371 -31584634 + AluSg/x SINE Alu 207 307 -3 26 0 0 0 chr20 35083371 35083397 -31584608 + AT_rich Low_complexity Low_complexity 1 26 0 360 298 128 21 chr20 35083799 35083940 -31584065 + L2 LINE L2 3117 3272 0 253 397 0 13 chr20 35083976 35084054 -31583951 + L2 LINE L2 3106 3182 -90 567 268 95 12 chr20 35084137 35084305 -31583700 + MIR SINE MIR 15 196 -66 1132 66 0 15 chr20 35084310 35084447 -31583558 + AluY SINE Alu 1 135 -176 2365 97 0 3 chr20 35084493 35084791 -31583214 - AluSc SINE Alu -12 297 1 1776 156 87 0 chr20 35084903 35085179 -31582826 - AluJb SINE Alu -12 300 1 1881 100 4 0 chr20 35085188 35085429 -31582576 - AluSx SINE Alu -15 297 56 282 157 0 0 chr20 35085501 35085552 -31582453 - AluSx SINE Alu -251 51 1 2175 104 7 29 chr20 35085576 35085885 -31582120 - AluSx SINE Alu -10 302 1 180 291 0 0 chr20 35085885 35085940 -31582065 - MIR SINE MIR -56 152 98 2276 95 3 0 chr20 35086541 35086850 -31581155 - AluSx SINE Alu 0 310 1 273 296 139 13 chr20 35087015 35087115 -31580890 + MIR SINE MIR 4 115 -93 1263 238 108 42 chr20 35087127 35087614 -31580391 - L2 LINE L2 -8 3305 2783 2302 108 0 3 chr20 35087623 35087928 -31580077 - AluSg SINE Alu -2 308 5 1093 90 0 35 chr20 35087928 35088073 -31579932 - AluSq/x SINE Alu -172 140 1 235 227 0 45 chr20 35088073 35088139 -31579866 - L2 LINE L2 -536 2778 2716 * 528 266 15 9 chr20 35088124 35088273 -31579732 + MIR SINE MIR 15 164 -63 897 108 8 0 chr20 35088300 35088420 -31579585 + AluJo/FLAM SINE Alu 13 133 -179 2278 112 0 3 chr20 35088422 35088725 -31579280 + AluSg SINE Alu 1 302 -8 2435 87 6 3 chr20 35088727 35089039 -31578966 + AluSp SINE Alu 1 313 0 185 311 85 9 chr20 35089049 35089065 -31578940 + MIR SINE MIR 136 149 -113 2335 105 0 7 chr20 35089065 35089371 -31578634 + AluSq SINE Alu 1 304 -9 185 311 85 9 chr20 35089371 35089460 -31578545 + MIR SINE MIR 149 249 -13 1215 150 0 0 chr20 35089465 35089645 -31578360 - FRAM SINE Alu 0 176 1 180 0 0 0 chr20 35089656 35089676 -31578329 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 457 304 30 7 chr20 35089693 35089828 -31578177 - MIR SINE MIR -105 157 20 508 59 0 0 chr20 35090023 35090091 -31577914 - L1PA5 LINE L1 -1 6153 6086 1855 48 0 13 chr20 35090092 35090323 -31577682 - L1PA5 LINE L1 0 6154 5927 287 54 0 0 chr20 35090324 35090361 -31577644 + L1PA5 LINE L1 5912 5948 -206 28 48 0 0 chr20 35090632 35090674 -31577331 + AT_rich Low_complexity Low_complexity 1 42 0 887 150 0 0 chr20 35090874 35091007 -31576998 + FLAM_C SINE Alu 1 133 0 318 205 0 51 chr20 35091053 35091131 -31576874 - L1ME4a LINE L1 -7 6114 6041 344 273 30 0 chr20 35091286 35091385 -31576620 - MIR SINE MIR -84 178 77 34 24 0 0 chr20 35091432 35091473 -31576532 + AT_rich Low_complexity Low_complexity 1 41 0 2108 128 27 0 chr20 35091491 35091787 -31576218 - AluSx SINE Alu -8 304 1 180 274 143 0 chr20 35092091 35092175 -31575830 + L2 LINE L2 2897 2992 -280 770 194 0 0 chr20 35092187 35092311 -31575694 - FLAM_A SINE Alu -9 124 1 1199 138 0 6 chr20 35092325 35092499 -31575506 - AluJb SINE Alu -19 293 121 274 295 84 68 chr20 35092551 35092741 -31575264 + L2 LINE L2 3121 3313 0 1788 183 0 16 chr20 35092750 35093061 -31574944 + AluJo SINE Alu 7 312 0 2130 113 10 10 chr20 35093063 35093363 -31574642 + AluSx SINE Alu 1 300 -12 510 70 0 0 chr20 35094092 35094163 -31573842 + (TA)n Simple_repeat Simple_repeat 1 71 0 23 0 0 0 chr20 35094197 35094220 -31573785 + AT_rich Low_complexity Low_complexity 1 23 0 883 126 0 8 chr20 35094626 35094753 -31573252 - AluJb SINE Alu -4 308 183 947 142 0 0 chr20 35094753 35094887 -31573118 - FLAM_C SINE Alu -9 134 1 1552 156 34 7 chr20 35094945 35095214 -31572791 + MER1B DNA MER1_type 1 276 -63 181 326 0 0 chr20 35095344 35095390 -31572615 + L2 LINE L2 3268 3313 0 2371 86 3 0 chr20 35095484 35095775 -31572230 - AluSp SINE Alu -21 292 1 857 280 172 23 chr20 35095858 35096021 -31571984 - L2 LINE L2 0 3313 3176 2382 83 0 3 chr20 35096021 35096322 -31571683 + AluY SINE Alu 1 300 -11 857 280 172 23 chr20 35096322 35096512 -31571493 - L2 LINE L2 -137 3176 2907 381 263 114 18 chr20 35096876 35096990 -31571015 - L2 LINE L2 0 3272 3148 418 275 138 6 chr20 35096990 35097157 -31570848 + MER5A DNA MER1_type 1 189 0 2570 47 0 7 chr20 35097225 35097523 -31570482 + AluSc SINE Alu 1 296 -13 2505 60 3 0 chr20 35098949 35099247 -31568758 - AluSp SINE Alu -14 299 1 531 231 23 44 chr20 35099252 35099410 -31568595 - MIR SINE MIR -65 143 40 216 291 76 13 chr20 35099739 35099818 -31568187 + MIR SINE MIR 1 84 -178 2073 125 14 3 chr20 35099839 35100134 -31567871 - AluSx SINE Alu -14 298 1 264 358 22 56 chr20 35100236 35100415 -31567590 - L2 LINE L2 -22 3291 3119 861 169 52 2 chr20 35100425 35100660 -31567345 - AluJo/FRAM SINE Alu -10 302 147 1374 146 0 10 chr20 35100660 35100866 -31567139 + AluSg/x SINE Alu 94 297 -15 463 228 101 7 chr20 35100867 35101016 -31566989 - L2 LINE L2 -1118 2196 2034 187 358 125 0 chr20 35101390 35101510 -31566495 + L2 LINE L2 3138 3272 0 471 154 222 0 chr20 35101897 35102014 -31565991 - L1MC3 LINE L1 0 7785 7643 866 106 0 124 chr20 35102021 35102182 -31565823 - FLAM_C SINE Alu -2 141 1 383 250 115 0 chr20 35102234 35102330 -31565675 + MIR3 SINE MIR 98 204 -4 25 51 0 0 chr20 35102336 35102375 -31565630 + AT_rich Low_complexity Low_complexity 1 39 0 419 88 0 121 chr20 35102498 35102551 -31565454 - MER116 DNA Mariner 0 80 41 1351 211 34 14 chr20 35102551 35102845 -31565160 + AluJo SINE Alu 1 300 -12 419 88 0 121 chr20 35102845 35102882 -31565123 - MER116 DNA Mariner -39 41 1 329 213 0 0 chr20 35103503 35103564 -31564441 - Charlie8 DNA MER1_type -2144 273 213 249 208 0 0 chr20 35103565 35103613 -31564392 - Charlie8 DNA MER1_type -2171 246 199 * 715 237 29 24 chr20 35103606 35103813 -31564192 - Charlie8 DNA MER1_type -2168 249 42 283 315 11 0 chr20 35104381 35104473 -31563532 - MIR SINE MIR -96 112 20 541 254 21 121 chr20 35104648 35104888 -31563117 + MIR SINE MIR 37 252 -10 249 194 290 0 chr20 35105048 35105110 -31562895 - L2 LINE L2 -4 3268 3189 273 283 26 35 chr20 35105172 35105285 -31562720 - MER103 DNA DNA -1 165 54 188 125 181 56 chr20 35105748 35105820 -31562185 - MIR SINE MIR -46 216 136 1037 181 0 0 chr20 35105826 35105986 -31562019 - AluJb SINE Alu -20 292 133 192 40 0 0 chr20 35106101 35106126 -31561879 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2310 112 0 0 chr20 35106177 35106473 -31561532 + AluSx SINE Alu 1 296 -16 358 158 79 40 chr20 35107197 35107272 -31560733 + Tigger5 DNA MER2_type 1 78 -2245 236 217 0 0 chr20 35107272 35107318 -31560687 - Tigger5 DNA MER2_type -3 2320 2275 1550 184 49 26 chr20 35107349 35107654 -31560351 - AluJo SINE Alu 0 312 1 2293 106 7 3 chr20 35107697 35107999 -31560006 + AluSg SINE Alu 1 303 -7 338 213 80 0 chr20 35108012 35108087 -31559918 + Tigger5 DNA MER2_type 2242 2322 -1 292 256 15 131 chr20 35108100 35108194 -31559811 - MIR SINE MIR -75 187 112 2353 122 0 0 chr20 35108194 35108505 -31559500 + AluSx SINE Alu 1 311 -1 292 256 15 131 chr20 35108505 35108547 -31559458 - MIR SINE MIR -150 112 67 415 271 32 78 chr20 35110854 35111000 -31557005 + L2 LINE L2 2871 3005 -267 2238 108 3 14 chr20 35111000 35111297 -31556708 - AluSx SINE Alu -10 302 9 415 271 32 78 chr20 35111297 35111368 -31556637 + L2 LINE L2 3005 3078 -194 190 282 0 99 chr20 35111681 35111731 -31556274 + L2 LINE L2 3244 3287 -26 1956 153 7 7 chr20 35111731 35112032 -31555973 - AluJo SINE Alu -11 301 1 190 282 0 99 chr20 35112032 35112052 -31555953 + L2 LINE L2 3287 3307 -6 1413 127 86 49 chr20 35112129 35112374 -31555631 + AluJo SINE Alu 46 299 -13 201 74 0 0 chr20 35112851 35112878 -31555127 + (TTGGGG)n Simple_repeat Simple_repeat 6 32 0 193 235 147 0 chr20 35113204 35113272 -31554733 - L2 LINE L2 0 3313 3236 704 269 131 87 chr20 35113306 35113524 -31554481 + L3 LINE CR1 1088 1295 -282 2289 97 0 10 chr20 35113524 35113823 -31554182 + AluSp SINE Alu 1 296 -17 704 269 131 87 chr20 35113823 35114016 -31553989 + L3 LINE CR1 1295 1517 -60 677 272 94 0 chr20 35114338 35114551 -31553454 - Charlie8 DNA MER1_type -2154 263 31 446 260 221 0 chr20 35114712 35114893 -31553112 - MIR SINE MIR 0 262 42 244 239 159 11 chr20 35117288 35117376 -31550629 - L2 LINE L2 -15 3298 3198 287 305 66 15 chr20 35117751 35117927 -31550078 + MIR SINE MIR 20 250 -12 409 200 84 21 chr20 35118112 35118207 -31549798 + FRAM SINE Alu 1 99 -77 627 252 71 24 chr20 35118222 35118476 -31549529 - L1MC4a LINE L1 -1736 6072 5807 250 354 100 19 chr20 35118782 35119226 -31548779 + L2 LINE L2 2584 3070 -202 2024 130 3 43 chr20 35119917 35120072 -31547933 - AluSx SINE Alu -23 289 150 2255 116 3 0 chr20 35120072 35120366 -31547639 - AluSq SINE Alu -18 295 1 2024 130 3 43 chr20 35120366 35120511 -31547494 - AluSx SINE Alu -162 150 1 210 304 96 40 chr20 35120653 35120778 -31547227 + L2 LINE L2 3163 3294 -19 229 216 159 11 chr20 35121194 35121282 -31546723 - HAL1b LINE L1 -11 1337 1237 2332 92 10 0 chr20 35121341 35121634 -31546371 + AluSg SINE Alu 1 296 -14 488 298 60 13 chr20 35121743 35121894 -31546111 + L2 LINE L2 3115 3272 0 358 263 0 0 chr20 35123330 35123410 -31544595 + MIR SINE MIR 183 262 0 576 299 103 93 chr20 35123541 35123636 -31544369 - L1MEc LINE L1 -4102 2208 2115 2184 108 23 10 chr20 35123636 35123942 -31544063 - AluSg SINE Alu 0 310 1 576 299 103 93 chr20 35123942 35124192 -31543813 - L1MEc LINE L1 -4195 2115 1869 1937 138 17 14 chr20 35124192 35124488 -31543517 + AluJb SINE Alu 1 297 -15 576 299 103 93 chr20 35124488 35124750 -31543255 - L1MEc LINE L1 -4441 1869 1611 2071 150 10 3 chr20 35124750 35125057 -31542948 - AluJb SINE Alu -3 309 1 576 299 103 93 chr20 35125057 35125105 -31542900 - L1MEc LINE L1 -4699 1611 1565 522 0 0 0 chr20 35125105 35125163 -31542842 + (TAGA)n Simple_repeat Simple_repeat 4 61 0 576 299 103 93 chr20 35125163 35125223 -31542782 - L1MEc LINE L1 -4745 1565 1483 2391 76 3 28 chr20 35125278 35125595 -31542410 - AluY SINE Alu -2 309 1 2183 118 6 22 chr20 35125600 35125915 -31542090 - AluSx SINE Alu -1 311 2 266 272 19 19 chr20 35125945 35126048 -31541957 - L1MEc LINE L1 -4862 1257 1155 22 56 0 0 chr20 35126059 35126095 -31541910 + AT_rich Low_complexity Low_complexity 1 36 0 2377 98 3 0 chr20 35126095 35126391 -31541614 + AluSp SINE Alu 1 297 -16 1705 141 15 78 chr20 35126394 35126727 -31541278 - AluJo SINE Alu 0 312 1 784 225 49 63 chr20 35126727 35127216 -31540789 - L1MEc LINE L1 -4957 1162 681 228 135 0 0 chr20 35127223 35127260 -31540745 + (T)n Simple_repeat Simple_repeat 1 37 0 524 279 125 14 chr20 35127288 35127496 -31540509 - L1MEc LINE L1 -5448 671 441 833 181 0 0 chr20 35127671 35127804 -31540201 - FLAM_A SINE Alu 0 133 1 1141 205 111 30 chr20 35127804 35128016 -31539989 - MER58B DNA MER1_type -2096 324 130 742 116 116 16 chr20 35128016 35128137 -31539868 + FLAM_C SINE Alu 1 133 0 2419 94 3 7 chr20 35128146 35128453 -31539552 + AluSx SINE Alu 1 306 -6 1141 205 111 30 chr20 35128453 35128528 -31539477 - MER58B DNA MER1_type -2297 123 3 989 163 0 7 chr20 35128536 35128689 -31539316 - FRAM SINE Alu -3 173 22 2138 123 13 25 chr20 35128704 35129020 -31538985 - AluJb SINE Alu 0 312 1 24 0 0 0 chr20 35129027 35129051 -31538954 + AT_rich Low_complexity Low_complexity 1 24 0 1433 131 86 0 chr20 35129086 35129307 -31538698 - AluSg/x SINE Alu -7 305 66 1615 171 7 48 chr20 35129307 35129600 -31538405 - AluJo SINE Alu -31 281 1 395 255 45 19 chr20 35129611 35129768 -31538237 - L1MEc LINE L1 -5955 164 4 237 182 23 0 chr20 35129865 35129909 -31538096 + L2 LINE L2 3264 3308 -5 2389 98 0 7 chr20 35130243 35130549 -31537456 + AluSx SINE Alu 1 304 -8 188 356 17 0 chr20 35130608 35130667 -31537338 - MIR SINE MIR 0 262 203 911 115 0 8 chr20 35130710 35130840 -31537165 + FLAM_C SINE Alu 1 129 -4 180 286 0 20 chr20 35130855 35130904 -31537101 - MIR SINE MIR -169 93 46 215 267 267 8 chr20 35130923 35131043 -31536962 - L3 LINE CR1 -74 1503 1353 371 306 219 23 chr20 35131081 35131346 -31536659 - L3 LINE CR1 -417 1160 844 229 135 0 0 chr20 35131351 35131388 -31536617 - tRNA-Cys-TGC tRNA tRNA -38 37 1 2021 146 0 31 chr20 35131499 35131821 -31536184 - AluJb SINE Alu 0 312 1 523 245 106 48 chr20 35131839 35131961 -31536044 - L2 LINE L2 -256 3057 2917 2321 100 0 7 chr20 35131961 35132260 -31535745 + AluSx SINE Alu 1 297 -15 523 245 106 48 chr20 35132260 35132345 -31535660 - L2 LINE L2 -396 2917 2838 766 231 93 13 chr20 35132466 35132691 -31535314 - MIR SINE MIR -16 246 4 812 173 0 0 chr20 35132955 35133082 -31534923 + FLAM_A SINE Alu 1 127 -6 2241 125 0 0 chr20 35133088 35133393 -31534612 + AluSx SINE Alu 1 305 -7 26 0 0 0 chr20 35133463 35133489 -31534516 + AT_rich Low_complexity Low_complexity 1 26 0 323 254 142 40 chr20 35133493 35133662 -31534343 - MIR SINE MIR -62 146 8 280 287 11 46 chr20 35134446 35134533 -31533472 - L2 LINE L2 0 3313 3230 971 119 8 0 chr20 35134544 35134678 -31533327 + AluSq/x SINE Alu 1 135 -178 2161 114 23 0 chr20 35134678 35134977 -31533028 + AluSx SINE Alu 1 306 -6 1045 287 91 24 chr20 35134985 35135237 -31532768 - L2 LINE L2 -69 3244 3011 1575 172 61 9 chr20 35135237 35135563 -31532442 + L1MB8 LINE L1 5836 6178 0 1045 287 91 24 chr20 35135563 35135784 -31532221 - L2 LINE L2 -302 3011 2739 2095 132 0 0 chr20 35135797 35136084 -31531921 - AluSx SINE Alu -23 289 3 235 196 0 0 chr20 35136129 35136185 -31531820 + LTR66 LTR ERVL 401 456 -154 193 255 20 0 chr20 35136231 35136282 -31531723 - L2 LINE L2 -664 2650 2599 1792 165 30 24 chr20 35137035 35137332 -31530673 - AluJo SINE Alu -13 299 1 870 273 77 136 chr20 35137881 35138538 -31529467 - L2 LINE L2 -1 3312 2717 2062 114 47 13 chr20 35138538 35138837 -31529168 + AluSx SINE Alu 1 309 -3 870 273 77 136 chr20 35138837 35139217 -31528788 - L2 LINE L2 -596 2717 2316 1245 129 0 0 chr20 35139249 35139420 -31528585 + AluSg/x SINE Alu 135 305 -7 229 294 47 24 chr20 35139422 35139507 -31528498 + MIR SINE MIR 176 262 0 197 331 153 25 chr20 35140296 35140453 -31527552 + MIR SINE MIR 86 262 0 845 289 32 4 chr20 35141214 35141463 -31526542 + MIR SINE MIR 1 256 -6 180 316 53 0 chr20 35141472 35141529 -31526476 + L2 LINE L2 3208 3267 -5 256 323 108 0 chr20 35141880 35142010 -31525995 + MIR SINE MIR 49 192 -70 2277 127 0 0 chr20 35142053 35142353 -31525652 + AluSq SINE Alu 1 300 -13 242 299 79 115 chr20 35142539 35142817 -31525188 - L2 LINE L2 -6 3266 2999 866 177 171 11 chr20 35143322 35143503 -31524502 - AluSx SINE Alu -11 298 89 212 304 18 0 chr20 35143541 35143597 -31524408 - MIR3 SINE MIR -9 199 143 650 96 0 0 chr20 35143688 35143771 -31524234 - AluSx SINE Alu -230 83 1 1407 115 0 5 chr20 35144225 35144417 -31523588 + AluSg/x SINE Alu 110 300 -10 187 339 18 0 chr20 35144556 35144612 -31523393 - MIR3 SINE MIR -9 199 143 195 42 0 0 chr20 35144875 35144899 -31523106 + (TCTCC)n Simple_repeat Simple_repeat 4 27 0 549 252 75 116 chr20 35148207 35148430 -31519575 - L2 LINE L2 -43 3229 3019 2429 96 0 0 chr20 35148430 35148732 -31519273 + AluSx SINE Alu 1 302 -10 549 252 75 116 chr20 35148732 35148802 -31519203 - L2 LINE L2 -253 3019 2948 249 299 239 29 chr20 35148850 35149432 -31518573 - L2 LINE L2 -456 2858 2155 250 298 60 0 chr20 35149452 35149536 -31518469 + L2 LINE L2 3164 3252 -20 293 309 43 0 chr20 35149760 35149854 -31518151 + MIR SINE MIR 50 147 -115 197 370 19 9 chr20 35150072 35150180 -31517825 - MIR SINE MIR -146 116 8 282 239 14 123 chr20 35150362 35150500 -31517505 - MIR SINE MIR -120 142 20 284 296 63 49 chr20 35150539 35150681 -31517324 + MIR3 SINE MIR 33 176 -32 481 157 116 107 chr20 35151313 35151374 -31516631 + MER58A DNA MER1_type 4 63 -278 2219 124 0 3 chr20 35151374 35151673 -31516332 - AluSg SINE Alu -12 298 1 481 157 116 107 chr20 35151673 35151732 -31516273 + MER58A DNA MER1_type 63 125 -99 263 324 86 0 chr20 35152689 35152794 -31515211 + L2 LINE L2 3154 3267 -5 2028 152 0 3 chr20 35153776 35154066 -31513939 + AluSx SINE Alu 4 292 -20 260 204 54 43 chr20 35154070 35154163 -31513842 + L1ME2 LINE L1 6062 6155 -9 209 262 33 0 chr20 35154177 35154238 -31513767 - MER5B DNA MER1_type -115 63 1 287 344 62 0 chr20 35155134 35155262 -31512743 - L2 LINE L2 -28 3244 3109 895 204 0 0 chr20 35155764 35155916 -31512089 - FRAM SINE Alu -21 155 4 2414 96 3 13 chr20 35156304 35156618 -31511387 - AluSp SINE Alu -2 311 1 1225 138 0 6 chr20 35160663 35160837 -31507168 + AluJb SINE Alu 134 306 -6 1647 145 93 24 chr20 35160847 35161137 -31506868 + AluJb SINE Alu 2 311 -1 365 228 41 87 chr20 35161508 35161727 -31506278 - L1MC5 LINE L1 -865 7096 6888 229 243 71 138 chr20 35161759 35161808 -31506197 - L1MC4a LINE L1 -1072 6736 6685 2317 99 3 10 chr20 35161808 35162122 -31505883 + AluSx SINE Alu 1 312 0 229 243 71 138 chr20 35162122 35162221 -31505784 - L1MC4a LINE L1 -1123 6685 6581 411 132 57 38 chr20 35162221 35162327 -31505678 + L1MB3 LINE L1 6073 6180 -3 229 243 71 138 chr20 35162327 35162361 -31505644 - L1MC4a LINE L1 -1227 6581 6570 2516 76 7 0 chr20 35162361 35162665 -31505340 + AluSg SINE Alu 1 306 -4 229 243 71 138 chr20 35162665 35162719 -31505286 - L1MC4a LINE L1 -1238 6570 6514 2247 139 0 0 chr20 35162723 35163032 -31504973 - AluSx SINE Alu -3 309 1 1204 212 0 5 chr20 35163077 35163299 -31504706 + AluJb SINE Alu 78 298 -14 2282 103 3 0 chr20 35163343 35163633 -31504372 - AluSg SINE Alu -19 291 1 409 285 111 64 chr20 35163647 35163882 -31504123 - L1MC4a LINE L1 -1455 6353 6108 309 200 183 78 chr20 35164474 35164669 -31503336 - L2 LINE L2 -339 2975 2751 2434 87 3 0 chr20 35164669 35164967 -31503038 - AluSp SINE Alu -14 299 1 309 200 183 78 chr20 35164967 35165001 -31503004 - L2 LINE L2 -563 2751 2722 515 132 0 0 chr20 35166895 35166971 -31501034 + AluJ/FLAM SINE Alu 9 84 -228 1928 132 64 10 chr20 35167084 35167380 -31500625 - AluSx SINE Alu 0 312 1 564 199 83 13 chr20 35167380 35167536 -31500469 - Charlie5 DNA MER1_type -205 2407 2241 375 118 79 0 chr20 35167535 35167611 -31500394 - Charlie5 DNA MER1_type -2488 124 43 * 303 253 50 30 chr20 35167665 35167759 -31500246 - HAL1 LINE L1 -344 2163 2067 2470 94 0 0 chr20 35167759 35168058 -31499947 - AluSq SINE Alu -14 299 1 304 243 27 14 chr20 35168069 35168143 -31499862 - HAL1 LINE L1 -810 1697 1623 882 213 18 73 chr20 35168151 35168329 -31499676 + MLT1C LTR MaLR 8 166 -301 2277 103 3 3 chr20 35168329 35168621 -31499384 + AluSq SINE Alu 1 292 -21 882 213 18 73 chr20 35168621 35168699 -31499306 + MLT1C LTR MaLR 166 248 -219 1486 124 66 12 chr20 35168699 35168957 -31499048 - MER66B LTR ERV1 0 486 215 283 208 94 83 chr20 35168953 35169049 -31498956 - AluJ/FLAM SINE Alu -226 76 1 * 260 288 78 58 chr20 35169053 35169258 -31498747 - LTR67 LTR ERVL 0 557 349 483 263 7 2 chr20 35169267 35169403 -31498602 + MLT1H LTR MaLR 1 174 -375 1961 173 0 10 chr20 35169404 35169711 -31498294 + AluJo SINE Alu 2 305 -7 288 337 54 65 chr20 35169712 35169973 -31498032 + L1MEd LINE L1 307 564 -5555 1805 113 12 110 chr20 35170685 35171012 -31496993 - AluJb SINE Alu -17 295 1 297 243 189 36 chr20 35172835 35172946 -31495059 + L2 LINE L2 3185 3312 -1 2376 103 0 3 chr20 35172964 35173264 -31494741 - AluSx SINE Alu -13 299 1 2246 100 0 17 chr20 35173270 35173610 -31494395 - AluSq SINE Alu 0 313 1 526 310 91 33 chr20 35173621 35173810 -31494195 + L2 LINE L2 2204 2381 -933 2278 113 0 13 chr20 35173810 35174120 -31493885 - AluSx SINE Alu -6 306 1 526 310 91 33 chr20 35174120 35174220 -31493785 + L2 LINE L2 2381 2474 -840 1548 188 30 17 chr20 35174220 35174386 -31493619 - AluSx SINE Alu -10 302 129 2109 138 0 7 chr20 35174386 35174690 -31493315 - AluSx SINE Alu -5 307 6 1548 188 30 17 chr20 35174690 35174821 -31493184 - AluSx SINE Alu -183 129 1 526 310 91 33 chr20 35174821 35174894 -31493111 + L2 LINE L2 2474 2588 -726 455 200 17 165 chr20 35175091 35175167 -31492838 + L1MD3 LINE L1 7800 7886 -109 2287 92 10 16 chr20 35175167 35175471 -31492534 + AluSp SINE Alu 1 302 -11 455 200 17 165 chr20 35175471 35175519 -31492486 + L1MD3 LINE L1 7886 7939 -56 1757 149 61 10 chr20 35175519 35175631 -31492374 + AluJo SINE Alu 1 106 -206 423 0 0 0 chr20 35175631 35175678 -31492327 + (CA)n Simple_repeat Simple_repeat 2 48 0 1757 149 61 10 chr20 35175678 35175860 -31492145 + AluJo SINE Alu 106 310 -2 455 200 17 165 chr20 35175860 35175964 -31492041 + L1MD3 LINE L1 7939 7995 0 1122 154 97 15 chr20 35175970 35176165 -31491840 + AluJo SINE Alu 84 294 -18 2255 116 0 0 chr20 35176226 35176520 -31491485 - AluSc SINE Alu -15 294 1 2345 116 3 0 chr20 35176590 35176892 -31491113 + AluSx SINE Alu 1 303 -9 279 0 0 0 chr20 35176892 35176906 -31491099 + (TG)n Simple_repeat Simple_repeat 1 45 0 279 0 0 0 chr20 35176906 35176937 -31491068 + (TG)n Simple_repeat Simple_repeat 2 32 0 1316 112 18 22 chr20 35176974 35177001 -31491004 - L1PA10 LINE L1 -8 6160 6134 2217 100 20 17 chr20 35177001 35177302 -31490703 + AluSc SINE Alu 1 302 -7 1316 112 18 22 chr20 35177302 35177497 -31490508 - L1PA10 LINE L1 -34 6134 5939 298 143 0 0 chr20 35177517 35177566 -31490439 - L1MB7 LINE L1 -98 6086 6038 823 225 24 89 chr20 35177678 35177988 -31490017 - L1MEd LINE L1 -4884 1235 1004 2254 108 10 3 chr20 35177988 35178284 -31489721 - AluSx SINE Alu -14 298 1 823 225 24 89 chr20 35178284 35178376 -31489629 - L1MEd LINE L1 -5115 1004 908 1171 75 20 0 chr20 35178393 35178540 -31489465 - AluSg/x SINE Alu -14 296 147 255 134 152 0 chr20 35178544 35178610 -31489395 + MIR SINE MIR 88 145 -63 2173 125 0 0 chr20 35178620 35178908 -31489097 + AluSx SINE Alu 9 296 -16 829 138 0 43 chr20 35179295 35179433 -31488572 - FLAM_A SINE Alu -1 132 1 2124 116 10 3 chr20 35179493 35179786 -31488219 + AluSx SINE Alu 1 295 -17 2198 116 0 3 chr20 35179837 35180130 -31487875 - AluSg SINE Alu -18 292 1 193 73 24 24 chr20 35180152 35180193 -31487812 + (TTA)n Simple_repeat Simple_repeat 1 41 0 2322 81 0 56 chr20 35180228 35180551 -31487454 - AluSg SINE Alu -5 305 1 209 350 70 0 chr20 35180552 35180652 -31487353 + L2 LINE L2 3152 3258 -14 2170 116 0 26 chr20 35180704 35181046 -31486959 - AluSq SINE Alu 0 313 1 2020 124 0 39 chr20 35181046 35181353 -31486652 - AluSx SINE Alu -15 297 3 619 227 149 7 chr20 35181447 35181601 -31486404 - MER5A DNA MER1_type -1 188 13 209 188 29 14 chr20 35181872 35181888 -31486117 + (TA)n Simple_repeat Simple_repeat 1 15 -55 2682 44 0 22 chr20 35181888 35182206 -31485799 - AluY SINE Alu 0 311 1 209 188 29 14 chr20 35182206 35182258 -31485747 + (TA)n Simple_repeat Simple_repeat 15 70 0 334 284 64 84 chr20 35182260 35182556 -31485449 - L1MCa LINE L1 -4215 2211 1922 * 362 200 41 117 chr20 35182374 35182622 -31485383 + L1MCa LINE L1 1922 2081 -4345 26 0 0 0 chr20 35182622 35182648 -31485357 + AT_rich Low_complexity Low_complexity 1 26 0 395 136 0 0 chr20 35182665 35182724 -31485281 - AluJo SINE Alu -20 282 224 492 198 94 158 chr20 35182883 35183211 -31484794 + MER51A LTR ERV1 328 634 0 1217 149 79 23 chr20 35183232 35183315 -31484690 - AluJo SINE Alu -86 226 149 2097 127 0 3 chr20 35183315 35183606 -31484399 - AluSx SINE Alu -4 308 19 1217 149 79 23 chr20 35183606 35183736 -31484269 - AluJo SINE Alu -163 149 1 360 295 100 34 chr20 35183739 35184012 -31483993 - L1MC4a LINE L1 -328 5826 5636 407 265 34 8 chr20 35184439 35184556 -31483449 + MIR SINE MIR 30 149 -113 390 259 102 0 chr20 35184610 35184718 -31483287 - MER5A DNA MER1_type -70 119 1 301 271 24 0 chr20 35186011 35186096 -31481909 - MIR SINE MIR -71 137 51 297 277 277 13 chr20 35186321 35186480 -31481525 + MIR SINE MIR 19 219 -43 370 214 168 23 chr20 35186658 35186789 -31481216 - L2 LINE L2 -789 2525 2376 749 199 13 0 chr20 35186812 35186963 -31481042 - MLT1F LTR MaLR -2 540 388 470 17 17 0 chr20 35186989 35187048 -31480957 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 2215 92 0 7 chr20 35187048 35187330 -31480675 - AluSc SINE Alu -29 280 1 2301 99 20 0 chr20 35187782 35188084 -31479921 - AluSx SINE Alu -3 309 2 1548 176 62 62 chr20 35188085 35188258 -31479747 - MLT1F LTR MaLR -201 341 166 2307 97 0 29 chr20 35188258 35188569 -31479436 + AluSq SINE Alu 1 302 -11 1548 176 62 62 chr20 35188569 35188736 -31479269 - MLT1F LTR MaLR -375 167 1 1402 238 459 5 chr20 35188745 35189947 -31478058 - L2 LINE L2 -932 2382 635 403 294 61 25 chr20 35190037 35190200 -31477805 + MIR SINE MIR 91 259 -3 223 260 65 39 chr20 35190217 35190294 -31477711 + MIR SINE MIR 183 261 -1 273 292 226 26 chr20 35190723 35190918 -31477087 + MIR SINE MIR 13 246 -16 241 167 0 0 chr20 35190961 35191003 -31477002 - MER5A DNA MER1_type -85 104 63 715 162 49 0 chr20 35191009 35191151 -31476854 - L1MB4 LINE L1 0 6180 6032 921 137 0 34 chr20 35191180 35191326 -31476679 + FLAM_C SINE Alu 3 143 0 658 301 22 0 chr20 35191984 35192167 -31475838 + MIR SINE MIR 2 188 -74 347 239 146 31 chr20 35192266 35192396 -31475609 + MIR SINE MIR 48 192 -70 321 185 261 25 chr20 35192418 35192537 -31475468 - L2 LINE L2 0 3313 3167 235 264 19 0 chr20 35192541 35192594 -31475411 + Tigger5 DNA MER2_type 2 55 -2268 499 110 0 130 chr20 35192594 35192623 -31475382 + Tigger5 DNA MER2_type 2237 2268 -55 2413 104 0 0 chr20 35192623 35192922 -31475083 - AluSx SINE Alu -13 299 1 499 110 0 130 chr20 35192922 35192992 -31475013 + Tigger5 DNA MER2_type 2268 2323 0 5574 256 131 36 chr20 35192993 35193319 -31474686 - L2 LINE L2 -157 3156 2863 2422 103 0 0 chr20 35193319 35193621 -31474384 + AluSx SINE Alu 1 302 -10 5574 256 131 36 chr20 35193621 35194015 -31473990 - L2 LINE L2 -450 2863 2508 2042 121 0 7 chr20 35194015 35194297 -31473708 + AluSx SINE Alu 21 300 -12 5574 256 131 36 chr20 35194297 35196006 -31471999 - L2 LINE L2 -805 2508 398 1526 157 91 21 chr20 35196006 35196292 -31471713 - AluJb SINE Alu 0 312 7 5574 256 131 36 chr20 35196292 35196732 -31471273 - L2 LINE L2 -2915 398 2 314 206 0 0 chr20 35197074 35197137 -31470868 - MIR SINE MIR -68 140 78 303 338 88 13 chr20 35198231 35198561 -31469444 - L2 LINE L2 -242 3030 2646 1149 127 30 0 chr20 35198674 35198839 -31469166 + AluSg/x SINE Alu 135 304 -6 275 209 0 45 chr20 35203034 35203101 -31464904 + G-rich Low_complexity Low_complexity 2 65 0 1313 223 58 69 chr20 35204113 35204592 -31463413 + MLT1K LTR MaLR 3 476 -112 2072 148 0 0 chr20 35205150 35205453 -31462552 + AluJb SINE Alu 1 303 -9 209 171 0 0 chr20 35206013 35206048 -31461957 + C-rich Low_complexity Low_complexity 1 35 0 1885 151 0 59 chr20 35206243 35206567 -31461438 + AluJb SINE Alu 4 308 -4 235 250 29 44 chr20 35207181 35207249 -31460756 - MIR SINE MIR -93 169 103 2155 99 0 0 chr20 35207251 35207524 -31460481 + AluSx SINE Alu 1 273 -39 1267 101 12 0 chr20 35207524 35207693 -31460312 + AluSg/x SINE Alu 123 293 -17 401 88 0 44 chr20 35208671 35208739 -31459266 - AluJo SINE Alu -176 136 72 2406 97 3 0 chr20 35208739 35209048 -31458957 + AluSx SINE Alu 1 310 -2 628 176 0 32 chr20 35209087 35209212 -31458793 - FLAM_C SINE Alu -17 126 6 340 284 29 37 chr20 35209223 35209463 -31458542 - L1MCa LINE L1 -810 1977 1537 682 175 0 16 chr20 35209475 35209601 -31458404 - FLAM_A SINE Alu -5 128 5 227 218 30 113 chr20 35209622 35209648 -31458357 + L2 LINE L2 3113 3140 -173 2431 112 0 0 chr20 35209648 35209960 -31458045 - AluSx SINE Alu 0 312 1 227 218 30 113 chr20 35209960 35210066 -31457939 + L2 LINE L2 3140 3234 -79 1983 130 24 10 chr20 35210163 35210455 -31457550 + AluJb SINE Alu 1 296 -16 2310 206 82 0 chr20 35210461 35211138 -31456867 + L1M3 LINE L1 4737 5466 -714 2520 74 0 3 chr20 35211145 35211455 -31456550 - AluSg SINE Alu -1 309 1 2412 104 0 0 chr20 35211485 35211793 -31456212 + AluSx SINE Alu 1 308 -4 608 290 73 51 chr20 35211793 35212108 -31455897 + L2 LINE L2 2706 3024 -289 902 195 25 0 chr20 35212108 35212267 -31455738 - AluJb SINE Alu -30 282 120 487 80 340 20 chr20 35212284 35212384 -31455621 + FLAM_C SINE Alu 2 133 0 497 201 7 171 chr20 35212439 35212524 -31455481 + L2 LINE L2 3083 3180 -133 2006 113 7 52 chr20 35212524 35212834 -31455171 - AluSp SINE Alu -17 296 1 497 201 7 171 chr20 35212834 35212993 -31455012 + L2 LINE L2 3180 3282 -31 2443 60 40 3 chr20 35212993 35213291 -31454714 + AluSp SINE Alu 1 309 -4 497 201 7 171 chr20 35213291 35213314 -31454691 + L2 LINE L2 3282 3307 -6 297 314 145 4 chr20 35213314 35213556 -31454449 - L1M4 LINE L1 -2424 3722 3447 2030 135 7 3 chr20 35213556 35213845 -31454160 + AluSx SINE Alu 1 290 -22 558 149 45 82 chr20 35213867 35213966 -31454039 - AluJo SINE Alu -80 232 138 2242 119 6 6 chr20 35213966 35214277 -31453728 - AluSx SINE Alu -1 311 1 558 149 45 82 chr20 35214277 35214311 -31453694 - AluJo SINE Alu -174 138 104 2102 120 0 17 chr20 35214311 35214611 -31453394 + AluSg SINE Alu 1 295 -15 2571 216 102 43 chr20 35214612 35215217 -31452788 + L1M4b LINE L1 805 1373 -5661 507 113 0 0 chr20 35215217 35215297 -31452708 + (TATG)n Simple_repeat Simple_repeat 2 81 0 2574 59 7 0 chr20 35215297 35215601 -31452404 - AluY SINE Alu -5 306 1 2571 216 102 43 chr20 35215601 35215732 -31452273 + L1M4b LINE L1 1373 1495 -5539 2194 104 10 10 chr20 35215732 35216030 -31451975 - AluY SINE Alu -13 298 1 2571 216 102 43 chr20 35216030 35216300 -31451705 + L1M4b LINE L1 1495 1748 -5286 1726 137 112 14 chr20 35216300 35216577 -31451428 + AluSq SINE Alu 1 304 -9 2354 100 3 0 chr20 35216581 35216881 -31451124 + AluSp SINE Alu 1 301 -12 2571 216 102 43 chr20 35216881 35216907 -31451098 + L1M4b LINE L1 1750 2043 -4991 2017 122 65 0 chr20 35216940 35217218 -31450787 - AluSq SINE Alu -17 296 1 2232 189 53 85 chr20 35217218 35217832 -31450173 - L1MC4a LINE L1 -881 6927 6332 1904 139 3 59 chr20 35217837 35218161 -31449844 - AluSx SINE Alu -6 306 1 1000 152 0 0 chr20 35218161 35218306 -31449699 - AluJo SINE Alu -167 145 1 952 209 37 61 chr20 35218329 35218626 -31449379 - L1MC4a LINE L1 -1488 6320 6031 2394 88 0 16 chr20 35218626 35218934 -31449071 - AluSc SINE Alu -6 303 1 364 311 51 23 chr20 35219093 35219270 -31448735 + MIR3 SINE MIR 23 204 -4 1147 137 93 90 chr20 35220130 35220218 -31447787 + MER33 DNA MER1_type 1 87 -2498 1066 202 128 57 chr20 35220218 35220343 -31447662 + AluJo SINE Alu 1 116 -186 1705 199 0 3 chr20 35220343 35220650 -31447355 - AluJb SINE Alu -4 308 3 1066 202 128 57 chr20 35220650 35220806 -31447199 + AluJo SINE Alu 116 302 0 1147 137 93 90 chr20 35220806 35220913 -31447092 + MER33 DNA MER1_type 87 192 -2393 2386 86 26 3 chr20 35220913 35221216 -31446789 - AluSx SINE Alu -2 310 1 1147 137 93 90 chr20 35221216 35221265 -31446740 + MER33 DNA MER1_type 192 239 -2346 2604 61 0 6 chr20 35221265 35221576 -31446429 - AluY SINE Alu -2 309 1 1147 137 93 90 chr20 35221576 35221650 -31446355 + MER33 DNA MER1_type 239 322 -2 1052 154 18 0 chr20 35221758 35221927 -31446078 - AluSg/x SINE Alu -7 303 132 253 308 55 14 chr20 35222699 35222798 -31445207 + MIR SINE MIR 45 149 -113 2248 116 7 0 chr20 35222798 35223100 -31444905 + AluSq SINE Alu 1 304 -9 253 308 55 14 chr20 35223100 35223167 -31444838 + MIR SINE MIR 149 212 -50 1730 157 25 11 chr20 35223191 35223472 -31444533 + AluJo SINE Alu 1 285 -27 2058 120 18 7 chr20 35223516 35223799 -31444206 + AluSx SINE Alu 1 286 -26 793 52 52 12 chr20 35223837 35224009 -31443996 + (TA)n Simple_repeat Simple_repeat 2 180 0 1483 240 73 20 chr20 35224077 35224877 -31443128 + L1MEc LINE L1 1887 2692 -3523 943 182 167 0 chr20 35224912 35225104 -31442901 + MER58A DNA MER1_type 1 224 0 2300 104 3 0 chr20 35227670 35227977 -31440028 - AluSx SINE Alu -4 308 1 1912 146 7 0 chr20 35228535 35228815 -31439190 - AluJb SINE Alu -30 282 1 1483 167 30 66 chr20 35228818 35228910 -31439095 - L1MB3 LINE L1 0 6183 6089 2573 65 3 0 chr20 35228910 35229218 -31438787 + AluY SINE Alu 2 310 -1 1483 167 30 66 chr20 35229218 35229491 -31438514 - L1MB3 LINE L1 -94 6089 5831 392 320 94 49 chr20 35229618 35229688 -31438317 + L2 LINE L2 2837 2902 -411 1669 159 0 33 chr20 35229688 35229964 -31438041 - AluJo SINE Alu -45 267 1 392 320 94 49 chr20 35229964 35230340 -31437665 + L2 LINE L2 2902 3303 -10 2187 136 3 3 chr20 35230361 35230669 -31437336 + AluSq SINE Alu 1 308 -5 862 180 12 0 chr20 35230670 35230842 -31437163 + L1ME2 LINE L1 5690 5863 -301 458 290 46 0 chr20 35230862 35230993 -31437012 - MER82 DNA MER2_type 0 653 517 786 188 0 0 chr20 35230996 35231129 -31436876 + FLAM_C SINE Alu 1 133 0 2282 108 0 0 chr20 35231139 35231425 -31436580 - AluSx SINE Alu -22 290 5 2492 90 0 0 chr20 35231775 35232085 -31435920 + AluSg SINE Alu 1 310 0 22 43 0 21 chr20 35232117 35232147 -31435858 + AT_rich Low_complexity Low_complexity 1 31 -15 1639 91 4 0 chr20 35232147 35232389 -31435616 + MER75B DNA T2_type 1 243 0 22 43 0 21 chr20 35232389 35232405 -31435600 + AT_rich Low_complexity Low_complexity 31 46 0 2050 130 16 23 chr20 35232405 35232713 -31435292 - AluSx SINE Alu 0 312 7 234 226 75 0 chr20 35232749 35232802 -31435203 - MER82 DNA MER2_type -161 492 436 2194 117 0 7 chr20 35232802 35233101 -31434904 - AluSx SINE Alu -7 305 9 835 196 17 17 chr20 35233107 35233286 -31434719 - MER82 DNA MER2_type -445 208 30 687 198 21 142 chr20 35233306 35233549 -31434456 + L1ME2 LINE L1 5901 6105 -59 2049 140 7 0 chr20 35233549 35233834 -31434171 + AluSx SINE Alu 1 287 -25 687 198 21 142 chr20 35233834 35233878 -31434127 + L1ME2 LINE L1 6105 6153 -11 2193 107 0 49 chr20 35233917 35234243 -31433762 + AluSg SINE Alu 1 310 0 2094 122 31 0 chr20 35234292 35234579 -31433426 + AluSx SINE Alu 1 296 -16 1205 168 25 5 chr20 35234639 35234842 -31433163 - AluJo SINE Alu -19 293 87 545 318 28 60 chr20 35234843 35235195 -31432810 + L1MCc LINE L1 102 442 -5981 2133 118 3 50 chr20 35235237 35235558 -31432447 + AluSq SINE Alu 1 306 -7 764 257 85 25 chr20 35236023 35236431 -31431574 + L1MCc LINE L1 1129 1566 -4889 805 233 72 0 chr20 35236447 35236683 -31431322 + L1MCc LINE L1 3312 3564 -3377 628 111 0 0 chr20 35236718 35236817 -31431188 + AluSc SINE Alu 209 307 -2 2438 204 38 68 chr20 35236819 35237253 -31430752 + L1MCc LINE L1 4059 4456 -2485 717 126 0 17 chr20 35237253 35237372 -31430633 + FLAM_C SINE Alu 2 118 -15 2438 204 38 68 chr20 35237372 35237787 -31430218 + L1MCc LINE L1 4456 4882 -2059 513 101 0 0 chr20 35237811 35237880 -31430125 + AluJ/FLAM SINE Alu 9 77 -235 381 143 0 107 chr20 35237887 35237971 -31430034 + Charlie1 DNA MER1_type 1945 2019 -742 738 172 0 0 chr20 35237971 35238087 -31429918 + AluJo/FLAM SINE Alu 3 118 -194 415 87 58 0 chr20 35238087 35238156 -31429849 - Alu SINE Alu -7 304 232 242 65 0 0 chr20 35238163 35238194 -31429811 + Charlie1 DNA MER1_type 2731 2761 0 260 247 56 34 chr20 35238205 35238294 -31429711 + L1ME LINE L1 5674 5764 -406 363 44 0 0 chr20 35238298 35238343 -31429662 + (TA)n Simple_repeat Simple_repeat 2 46 0 381 262 9 19 chr20 35239161 35239268 -31428737 + MER5A DNA MER1_type 4 109 -80 225 0 0 0 chr20 35239392 35239417 -31428588 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 431 174 31 0 chr20 35239432 35239530 -31428475 + L2 LINE L2 2446 2546 -768 847 100 8 8 chr20 35239531 35239651 -31428354 + AluSq/x SINE Alu 1 120 -192 1458 259 148 45 chr20 35239700 35240111 -31427894 + L2 LINE L2 2047 2414 -899 1568 161 0 0 chr20 35240111 35240335 -31427670 - AluJo SINE Alu -88 224 1 1458 259 148 45 chr20 35240335 35240941 -31427064 + L2 LINE L2 2414 3180 -133 989 189 11 11 chr20 35240993 35241168 -31426837 - AluJo SINE Alu -20 292 118 289 205 181 0 chr20 35241168 35241251 -31426754 + L2 LINE L2 3211 3308 -5 221 323 205 33 chr20 35241246 35241356 -31426649 - L2 LINE L2 -1518 1796 1706 * 2138 126 16 7 chr20 35241356 35241665 -31426340 - AluSx SINE Alu 0 312 1 221 323 205 33 chr20 35241665 35241861 -31426144 - L2 LINE L2 -1608 1706 1437 213 121 0 0 chr20 35246517 35246550 -31421455 + (CA)n Simple_repeat Simple_repeat 1 33 0 456 216 81 0 chr20 35246679 35246790 -31421215 - L2 LINE L2 0 3313 3194 749 157 0 50 chr20 35247986 35248151 -31419854 - FLAM_C SINE Alu 0 158 1 555 299 60 95 chr20 35248221 35248652 -31419353 + L2 LINE L2 2856 3271 -1 2241 113 10 0 chr20 35248689 35248989 -31419016 + AluSg SINE Alu 1 303 -7 2368 128 0 0 chr20 35249630 35249942 -31418063 + AluSx SINE Alu 1 312 0 2221 131 0 10 chr20 35251027 35251361 -31416644 - AluSx SINE Alu 0 331 1 2232 119 0 28 chr20 35251431 35251608 -31416397 - AluSx SINE Alu -2 310 144 2113 123 0 7 chr20 35251608 35251900 -31416105 - AluSg SINE Alu -16 294 5 2232 119 0 28 chr20 35251900 35252041 -31415964 - AluSx SINE Alu -168 144 1 1783 171 63 0 chr20 35252047 35252333 -31415672 - AluJb SINE Alu -8 304 1 255 345 46 0 chr20 35252338 35252425 -31415580 + L2 LINE L2 3222 3312 -1 1657 166 54 0 chr20 35252823 35253101 -31414904 - AluJo SINE Alu -18 294 2 755 102 0 0 chr20 35253327 35253435 -31414570 + AluY SINE Alu 204 311 0 660 170 0 88 chr20 35253469 35253616 -31414389 + FRAM SINE Alu 38 171 -5 1945 129 3 3 chr20 35253618 35253912 -31414093 + AluSg SINE Alu 1 294 -16 2291 101 0 77 chr20 35253923 35254288 -31413717 - MER1B DNA MER1_type 0 337 1 216 293 0 0 chr20 35254456 35254514 -31413491 + MIR SINE MIR 78 135 -73 2046 118 0 3 chr20 35254554 35254850 -31413155 - AluSx SINE Alu -17 295 1 2305 84 0 0 chr20 35255012 35255309 -31412696 + AluY SINE Alu 1 297 -14 1804 111 15 11 chr20 35255313 35255584 -31412421 - AluSg SINE Alu -38 272 1 1983 138 3 0 chr20 35255854 35256150 -31411855 - AluSx SINE Alu -15 297 1 2260 109 0 0 chr20 35256320 35256632 -31411373 - AluSx SINE Alu 0 312 1 201 262 84 110 chr20 35256632 35256688 -31411317 + MER5A DNA MER1_type 9 65 -124 1957 127 3 29 chr20 35256688 35257003 -31411002 + AluSx SINE Alu 1 307 -5 201 262 84 110 chr20 35257003 35257129 -31410876 + MER5A DNA MER1_type 65 188 -1 734 224 94 39 chr20 35257394 35257537 -31410468 - L2 LINE L2 0 3313 3148 1995 131 0 0 chr20 35257537 35257834 -31410171 + AluJo SINE Alu 1 297 -15 734 224 94 39 chr20 35257834 35257944 -31410061 - L2 LINE L2 -165 3148 3046 2163 103 3 0 chr20 35257974 35258284 -31409721 + AluSx SINE Alu 1 311 -1 2111 92 7 0 chr20 35258285 35258649 -31409356 + AluSp SINE Alu 2 367 0 941 150 6 12 chr20 35258724 35258884 -31409121 + FRAM SINE Alu 1 159 -7 2282 68 10 0 chr20 35259787 35260083 -31407922 - AluSp SINE Alu -14 299 1 201 188 21 0 chr20 35262173 35262221 -31405784 + (CAGAGA)n Simple_repeat Simple_repeat 4 52 0 25 31 0 0 chr20 35262266 35262298 -31405707 + GC_rich Low_complexity Low_complexity 1 32 0 217 221 39 13 chr20 35262600 35262677 -31405328 + (CTGGGG)n Simple_repeat Simple_repeat 1 79 0 237 313 45 0 chr20 35262975 35263042 -31404963 + MIR SINE MIR 112 181 -81 459 276 147 6 chr20 35263084 35263117 -31404888 - MIR SINE MIR -21 241 214 1941 115 7 16 chr20 35263117 35263421 -31404584 - AluSx SINE Alu -8 304 4 459 276 147 6 chr20 35263421 35263557 -31404448 - MIR SINE MIR -48 214 48 695 111 0 0 chr20 35263563 35263662 -31404343 + Alu SINE Alu 204 302 -9 330 310 231 5 chr20 35264338 35264541 -31403464 - MIR SINE MIR 0 262 14 579 264 126 54 chr20 35265016 35265277 -31402728 + L1ME4a LINE L1 5559 5838 -283 1664 116 93 0 chr20 35265319 35265601 -31402404 + AluSc SINE Alu 1 306 0 517 269 81 11 chr20 35265687 35265873 -31402132 + L1ME LINE L1 5539 5737 -384 2144 76 0 14 chr20 35265970 35266287 -31401718 + AluSx SINE Alu 1 313 0 1126 101 0 0 chr20 35266287 35266436 -31401569 + AluSg/x SINE Alu 133 281 -31 229 232 141 10 chr20 35266509 35266608 -31401397 + L1 LINE L1 5151 5262 -884 2289 91 7 0 chr20 35266723 35267031 -31400974 + AluSg SINE Alu 1 310 0 334 230 119 93 chr20 35267113 35267339 -31400666 + L1ME LINE L1 5563 5794 -327 2092 110 20 0 chr20 35267358 35267657 -31400348 + AluSx SINE Alu 1 305 -7 2252 77 0 3 chr20 35267810 35268110 -31399895 - AluY SINE Alu -12 299 1 2038 132 0 0 chr20 35268284 35268580 -31399425 - AluSx SINE Alu -16 296 1 570 194 52 15 chr20 35268854 35268988 -31399017 - FLAM_A SINE Alu 0 142 4 2244 102 0 0 chr20 35270059 35270363 -31397642 + AluSx SINE Alu 1 304 -8 2971 191 144 45 chr20 35270726 35271017 -31396988 + L1MC4 LINE L1 6896 7157 -885 845 152 0 8 chr20 35271017 35271149 -31396856 + FLAM_A SINE Alu 1 131 -2 2370 62 0 31 chr20 35271153 35271474 -31396531 + AluY SINE Alu 1 311 0 2971 191 144 45 chr20 35271474 35272056 -31395949 + L1MC4 LINE L1 7159 7861 -181 243 88 0 0 chr20 35272195 35272229 -31395776 + (CA)n Simple_repeat Simple_repeat 1 68 0 243 88 0 0 chr20 35272229 35272263 -31395742 + (CA)n Simple_repeat Simple_repeat 2 35 0 299 145 5 18 chr20 35272381 35272456 -31395549 + L1MC4 LINE L1 7923 8042 0 183 80 0 0 chr20 35272458 35272483 -31395522 + (CAGAT)n Simple_repeat Simple_repeat 1 25 0 322 312 208 15 chr20 35272656 35272809 -31395196 - MIR SINE MIR -1 261 58 1799 154 0 29 chr20 35272809 35273115 -31394890 - AluJb SINE Alu -15 297 1 322 312 208 15 chr20 35273115 35273163 -31394842 - MIR SINE MIR -204 58 21 1927 129 0 7 chr20 35273164 35273458 -31394547 + AluSx SINE Alu 1 292 -20 953 234 95 125 chr20 35276638 35276824 -31391181 + L2 LINE L2 2552 2742 -571 2249 97 0 19 chr20 35276824 35277133 -31390872 + AluSq SINE Alu 1 303 -10 2286 74 0 0 chr20 35277133 35277432 -31390573 + AluY SINE Alu 1 299 -12 953 234 95 125 chr20 35277432 35277519 -31390486 + L2 LINE L2 2741 2829 -484 1623 123 8 4 chr20 35277519 35277771 -31390234 + AluSq SINE Alu 55 307 -6 953 234 95 125 chr20 35277771 35277891 -31390114 + L2 LINE L2 2829 2951 -362 1418 177 16 23 chr20 35277891 35278196 -31389809 - AluJo SINE Alu -9 303 1 953 234 95 125 chr20 35278196 35278536 -31389469 + L2 LINE L2 2951 3267 -46 368 347 177 11 chr20 35278993 35279371 -31388634 - L3 LINE CR1 -17 1560 1120 1523 124 105 0 chr20 35279671 35279929 -31388076 + AluSx SINE Alu 1 285 -27 569 299 160 25 chr20 35280761 35281079 -31386926 + L2 LINE L2 2596 2956 -358 246 336 164 9 chr20 35281231 35281347 -31386658 + L2 LINE L2 3136 3269 -3 220 300 90 20 chr20 35281352 35281452 -31386553 - L3 LINE CR1 -641 936 830 2358 208 139 34 chr20 35281452 35282245 -31385760 + L1ME2 LINE L1 5274 6149 -15 2031 114 3 0 chr20 35282499 35282789 -31385216 - AluSx SINE Alu -21 291 1 286 330 165 0 chr20 35283820 35283935 -31384070 + L2 LINE L2 3139 3272 0 390 340 111 7 chr20 35284295 35284448 -31383557 - MIR3 SINE MIR -6 202 34 184 406 0 0 chr20 35284531 35284600 -31383405 + MIR SINE MIR 13 81 -181 409 264 164 6 chr20 35284637 35284796 -31383209 + MIR SINE MIR 78 261 -1 262 233 33 0 chr20 35285040 35285100 -31382905 - MER63 DNA MER1_type 0 1061 1000 709 157 0 16 chr20 35286300 35286421 -31381584 + 7SK RNA RNA 7 125 -68 423 119 90 0 chr20 35286454 35286521 -31381484 + 7SK RNA RNA 121 193 0 1924 103 71 0 chr20 35286623 35286905 -31381100 + AluSx SINE Alu 1 302 -10 421 297 65 7 chr20 35287177 35287315 -31380690 + MIR SINE MIR 100 245 -17 273 273 146 9 chr20 35287658 35287768 -31380237 - MIR3 SINE MIR -3 205 81 1212 128 103 135 chr20 35289114 35289426 -31378579 + AluJb SINE Alu 1 302 0 955 106 8 0 chr20 35289544 35289676 -31378329 - FLAM_C SINE Alu 0 133 1 2349 81 0 10 chr20 35290182 35290490 -31377515 + AluSq SINE Alu 1 305 -8 580 136 39 0 chr20 35290490 35290584 -31377421 - U6 snRNA snRNA -6 101 1 1967 101 3 42 chr20 35290926 35291233 -31376772 + AluSg SINE Alu 1 295 -15 23 0 0 0 chr20 35295972 35295995 -31372010 + GC_rich Low_complexity Low_complexity 1 23 0 24 32 0 0 chr20 35299323 35299354 -31368651 + AT_rich Low_complexity Low_complexity 1 31 0 1641 121 107 4 chr20 35299684 35299956 -31368049 - AluSq SINE Alu -9 304 5 2030 94 54 3 chr20 35300932 35301230 -31366775 + AluSq SINE Alu 1 313 0 23 0 0 0 chr20 35301230 35301253 -31366752 + AT_rich Low_complexity Low_complexity 1 23 0 245 286 84 34 chr20 35301264 35301383 -31366622 + MIR3 SINE MIR 67 191 -17 1953 96 3 65 chr20 35301633 35301956 -31366049 + AluSg1 SINE Alu 1 303 -6 333 0 0 0 chr20 35301956 35301993 -31366012 + (CA)n Simple_repeat Simple_repeat 2 38 0 38 0 0 0 chr20 35302806 35302844 -31365161 + AT_rich Low_complexity Low_complexity 1 38 0 1904 98 0 51 chr20 35303356 35303672 -31364333 - AluSx SINE Alu -12 300 1 195 280 120 13 chr20 35303870 35303945 -31364060 - MER5A DNA MER1_type -40 149 67 194 286 210 8 chr20 35308258 35308377 -31359628 + MIR SINE MIR 48 190 -72 2577 33 0 3 chr20 35308466 35308773 -31359232 + AluY SINE Alu 1 306 -5 2060 107 10 0 chr20 35308782 35309081 -31358924 + AluSq SINE Alu 1 302 -11 2083 111 0 0 chr20 35309095 35309393 -31358612 + AluSx SINE Alu 1 298 -14 657 160 64 0 chr20 35309461 35309586 -31358419 + AluJo SINE Alu 1 133 -169 943 168 0 18 chr20 35309646 35309813 -31358192 + AluJo SINE Alu 136 299 -13 539 124 67 0 chr20 35310000 35310089 -31357916 + L1MD3 LINE L1 7729 7823 -172 585 138 156 18 chr20 35310089 35310198 -31357807 + FLAM_C SINE Alu 2 125 -18 524 146 54 119 chr20 35310223 35310282 -31357723 + L1MD3 LINE L1 7818 7879 -116 2204 97 3 3 chr20 35310282 35310593 -31357412 - AluY SINE Alu 0 311 1 1882 117 0 52 chr20 35310593 35310900 -31357105 - AluSx SINE Alu -21 291 1 1780 163 0 3 chr20 35310902 35311196 -31356809 - AluJb SINE Alu -19 293 1 524 146 54 119 chr20 35311196 35311317 -31356688 + L1MD3 LINE L1 7879 7990 -5 248 228 76 0 chr20 35311440 35311519 -31356486 + MER112 DNA MER1_type 10 94 -166 795 303 141 18 chr20 35311615 35312005 -31356000 + L2 LINE L2 2871 3308 -5 2140 78 11 4 chr20 35314273 35314554 -31353451 - AluY SINE Alu -28 283 1 883 195 0 29 chr20 35314554 35314728 -31353277 + AluJo SINE Alu 118 286 -26 1907 164 0 0 chr20 35314761 35315060 -31352945 + AluJb SINE Alu 1 299 -13 2332 74 3 3 chr20 35315102 35315411 -31352594 - AluY SINE Alu -2 309 1 2043 112 0 3 chr20 35315411 35315704 -31352301 - AluSp SINE Alu -20 293 1 2140 120 0 0 chr20 35316159 35316458 -31351547 + AluSx SINE Alu 1 299 -13 485 236 169 7 chr20 35316460 35316608 -31351397 + MER5A DNA MER1_type 18 189 0 312 271 0 0 chr20 35317902 35317961 -31350044 + L2 LINE L2 3196 3254 -18 738 260 0 6 chr20 35318615 35318750 -31349255 + L1MC4a LINE L1 5693 5828 -1980 1899 139 26 0 chr20 35318750 35319052 -31348953 + AluSx SINE Alu 1 310 -2 738 260 0 6 chr20 35319052 35319097 -31348908 + L1MC4a LINE L1 5828 5872 -1936 226 143 20 20 chr20 35319088 35319137 -31348868 + L1MD3 LINE L1 7777 7825 -170 * 2209 89 3 0 chr20 35319157 35319450 -31348555 + AluSp SINE Alu 1 294 -19 2010 125 3 0 chr20 35319459 35319748 -31348257 + AluSg SINE Alu 1 290 -20 355 275 64 144 chr20 35319748 35320017 -31347988 + L1MC4a LINE L1 5861 6097 -1711 2016 123 0 3 chr20 35320017 35320318 -31347687 - AluSg SINE Alu -10 300 1 355 275 64 144 chr20 35320318 35320394 -31347611 + L1MC4a LINE L1 6097 6178 -1630 1697 153 0 27 chr20 35320407 35320707 -31347298 + AluJo SINE Alu 5 296 -16 1595 142 16 77 chr20 35320941 35321086 -31346919 + AluSx SINE Alu 2 119 -183 2270 72 7 16 chr20 35321086 35321221 -31346784 + AluSq SINE Alu 1 136 -177 2186 84 3 22 chr20 35321221 35321532 -31346473 + AluY SINE Alu 1 305 -6 2270 72 7 16 chr20 35321532 35321702 -31346303 + AluSq SINE Alu 136 303 -10 1595 142 16 77 chr20 35321702 35321867 -31346138 + AluSx SINE Alu 119 293 -9 798 235 0 0 chr20 35321870 35322032 -31345973 + FRAM SINE Alu 5 166 0 628 103 9 69 chr20 35322302 35322350 -31345655 - L1MA1 LINE L1 -4 6298 6249 2066 91 32 0 chr20 35322350 35322635 -31345370 - AluSg SINE Alu -16 294 1 628 103 9 69 chr20 35322635 35322702 -31345303 - L1MA1 LINE L1 -53 6249 6190 24 0 0 0 chr20 35322984 35323008 -31344997 + AT_rich Low_complexity Low_complexity 1 24 0 2329 72 0 3 chr20 35323176 35323481 -31344524 + AluY SINE Alu 1 304 -7 193 250 26 0 chr20 35324135 35324211 -31343794 + CT-rich Low_complexity Low_complexity 2 79 0 181 57 57 0 chr20 35324367 35324402 -31343603 + A-rich Low_complexity Low_complexity 2 38 0 1987 142 0 0 chr20 35324569 35324865 -31343140 + AluSx SINE Alu 1 296 -16 216 260 137 0 chr20 35324875 35324948 -31343057 + MIR SINE MIR 47 129 -133 2327 161 48 36 chr20 35325229 35325660 -31342345 + L1MD1 LINE L1 5447 5871 -371 1828 141 31 0 chr20 35325660 35325950 -31342055 + AluSx SINE Alu 1 299 -13 2168 103 0 0 chr20 35325950 35326279 -31341726 + AluY SINE Alu 1 311 0 2327 161 48 36 chr20 35326279 35326350 -31341655 + L1MD1 LINE L1 5870 5956 -286 2142 88 0 10 chr20 35326355 35326652 -31341353 + AluSg SINE Alu 1 294 -16 2205 75 0 40 chr20 35326652 35326974 -31341031 + AluSc SINE Alu 1 309 0 1775 123 54 0 chr20 35327001 35327277 -31340728 + AluSq SINE Alu 3 293 -20 2062 77 11 14 chr20 35327279 35327621 -31340384 + AluY SINE Alu 1 341 0 1806 149 4 0 chr20 35327622 35327898 -31340107 + AluSx SINE Alu 1 277 -35 190 0 67 0 chr20 35327904 35327934 -31340071 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 677 175 9 0 chr20 35327936 35328050 -31339955 + AluJo/FLAM SINE Alu 2 116 -186 1970 125 7 0 chr20 35328050 35328339 -31339666 - AluSx SINE Alu -21 291 1 1145 211 33 72 chr20 35328382 35328686 -31339319 + AluJb SINE Alu 2 293 -9 183 49 73 0 chr20 35328687 35328728 -31339277 + (TA)n Simple_repeat Simple_repeat 1 44 0 2126 97 3 23 chr20 35328730 35329039 -31338966 + AluSq SINE Alu 1 303 -10 1863 106 0 4 chr20 35329079 35329343 -31338662 - AluSq SINE Alu -9 304 42 332 0 227 0 chr20 35329343 35329387 -31338618 - AluS SINE Alu -224 79 26 1051 73 0 0 chr20 35329387 35329524 -31338481 + AluSp/q SINE Alu 167 303 -10 613 172 23 8 chr20 35329553 35329681 -31338324 + L1MB7 LINE L1 6031 6160 -24 8349 35 34 0 chr20 35329876 35330555 -31337450 + LTR13 LTR ERVK 1 724 -283 302 0 26 0 chr20 35330555 35330593 -31337412 + (TC)n Simple_repeat Simple_repeat 2 40 0 8349 35 34 0 chr20 35330593 35330887 -31337118 + LTR13 LTR ERVK 724 1007 0 1146 197 53 63 chr20 35330969 35331115 -31336890 + AluJo SINE Alu 1 147 -155 1977 129 0 16 chr20 35331115 35331418 -31336587 + AluSq SINE Alu 1 298 -15 1801 173 0 7 chr20 35331426 35331733 -31336272 + AluSx SINE Alu 1 305 -7 1146 197 53 63 chr20 35331733 35331876 -31336129 + AluJo SINE Alu 154 296 -6 536 162 0 9 chr20 35331878 35331989 -31336016 + GA-rich Low_complexity Low_complexity 3 112 0 1244 154 0 10 chr20 35332359 35332560 -31335445 + AluSx SINE Alu 1 199 -113 620 75 0 12 chr20 35332560 35332640 -31335365 + AluSq/x SINE Alu 67 145 -168 2208 86 3 13 chr20 35332640 35332942 -31335063 + AluSc SINE Alu 1 299 -10 1263 185 0 80 chr20 35332944 35333269 -31334736 + AluSq SINE Alu 1 299 -14 558 144 0 0 chr20 35333282 35333372 -31334633 + AluSg/x SINE Alu 212 301 -9 598 271 52 38 chr20 35333836 35334046 -31333959 - MER21B LTR ERV1 -125 738 526 1631 122 16 4 chr20 35334053 35334299 -31333706 + L1MC1 LINE L1 6083 6331 -2 333 253 51 0 chr20 35334408 35334487 -31333518 - L2 LINE L2 0 3313 3231 2055 123 7 0 chr20 35334612 35334922 -31333083 + AluSx SINE Alu 1 312 0 1975 110 0 55 chr20 35334923 35335054 -31332951 + AluSg SINE Alu 2 139 -171 2170 111 0 9 chr20 35335054 35335370 -31332635 + AluSp SINE Alu 1 313 0 1975 110 0 55 chr20 35335370 35335565 -31332440 + AluSg SINE Alu 139 310 0 1389 137 86 62 chr20 35335579 35335871 -31332134 + AluJo SINE Alu 9 307 -5 2002 141 0 0 chr20 35335873 35336172 -31331833 + AluSx SINE Alu 1 299 -13 1823 131 30 7 chr20 35336246 35336551 -31331454 - AluSx SINE Alu 0 312 1 1495 161 0 88 chr20 35336699 35336835 -31331170 + AluJo SINE Alu 1 147 -165 2145 100 3 0 chr20 35336835 35337136 -31330869 + AluY SINE Alu 1 302 -9 1495 161 0 88 chr20 35337136 35337297 -31330708 + AluJo SINE Alu 147 267 -45 1939 120 20 20 chr20 35337297 35337598 -31330407 - AluSq SINE Alu -12 301 1 1495 161 0 88 chr20 35337598 35337641 -31330364 + AluJo SINE Alu 267 312 0 2137 64 0 0 chr20 35337794 35338061 -31329944 + AluY SINE Alu 34 300 -11 2144 112 0 0 chr20 35338913 35339209 -31328796 + AluSc SINE Alu 1 296 -13 592 272 36 84 chr20 35339828 35339840 -31328165 - MIR SINE MIR -5 257 246 1938 103 0 85 chr20 35339840 35339978 -31328027 + AluSq SINE Alu 1 149 -164 2168 88 3 0 chr20 35339978 35340263 -31327742 + AluSp SINE Alu 1 286 -27 180 0 0 0 chr20 35340269 35340289 -31327716 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 1938 103 0 85 chr20 35340289 35340474 -31327531 + AluSq SINE Alu 154 303 -10 592 272 36 84 chr20 35340474 35340711 -31327294 - MIR SINE MIR -16 246 20 264 219 268 0 chr20 35341336 35341418 -31326587 - MIR SINE MIR -154 108 5 304 237 10 93 chr20 35341428 35341525 -31326480 - MIR SINE MIR -100 108 20 496 299 213 5 chr20 35343082 35343293 -31324712 + MIR SINE MIR 8 262 0 241 283 0 0 chr20 35343458 35343504 -31324501 - L2 LINE L2 -18 3254 3209 1553 124 7 51 chr20 35344480 35344625 -31323380 - AluSg SINE Alu -48 262 133 2077 102 0 7 chr20 35344625 35344920 -31323085 + AluSg SINE Alu 1 293 -17 1553 124 7 51 chr20 35344920 35345048 -31322957 - AluSg SINE Alu -177 133 1 1590 137 100 0 chr20 35345807 35346077 -31321928 + AluSx SINE Alu 1 297 -15 25 0 0 0 chr20 35346383 35346408 -31321597 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr20 35348552 35348587 -31319418 + AT_rich Low_complexity Low_complexity 1 35 0 1711 150 39 0 chr20 35348669 35348955 -31319050 + AluSq SINE Alu 1 297 -16 922 118 0 15 chr20 35349073 35349209 -31318796 + AluSq/x SINE Alu 1 134 -179 1494 160 49 31 chr20 35349210 35349498 -31318507 + AluSx SINE Alu 1 293 -19 2353 87 3 0 chr20 35349899 35350211 -31317794 + AluSp SINE Alu 1 313 0 26 30 0 0 chr20 35351327 35351360 -31316645 + AT_rich Low_complexity Low_complexity 1 33 0 702 178 314 0 chr20 35355017 35355186 -31312819 + AluSq SINE Alu 1 222 -91 1617 126 134 11 chr20 35355340 35355609 -31312396 + AluSx SINE Alu 1 302 0 21 57 0 0 chr20 35355836 35355871 -31312134 + AT_rich Low_complexity Low_complexity 1 35 0 544 172 0 119 chr20 35356355 35356471 -31311534 + FLAM_C SINE Alu 1 129 -194 2079 105 3 49 chr20 35356471 35356777 -31311228 - AluSp SINE Alu -20 293 2 544 172 0 119 chr20 35356777 35356798 -31311207 + FLAM_C SINE Alu 129 120 -203 180 0 0 0 chr20 35356798 35356818 -31311187 + (CCAA)n Simple_repeat Simple_repeat 1 20 0 544 172 0 119 chr20 35356818 35356851 -31311154 + FLAM_C SINE Alu 119 154 -169 777 205 5 47 chr20 35356856 35357046 -31310959 + AluJb SINE Alu 127 308 -4 28 61 0 0 chr20 35357579 35357628 -31310377 + AT_rich Low_complexity Low_complexity 1 49 0 467 157 0 0 chr20 35357823 35357893 -31310112 + AluS SINE Alu 2 71 -242 1555 148 12 4 chr20 35358386 35358629 -31309376 - AluSq SINE Alu -68 245 1 1031 219 146 54 chr20 35358854 35359223 -31308782 + MSTB LTR MaLR 1 403 -23 2133 118 0 26 chr20 35359223 35359527 -31308478 - AluSx SINE Alu -16 296 1 349 181 96 0 chr20 35359628 35359711 -31308294 + U13 snRNA snRNA 5 95 -9 515 228 41 8 chr20 35359738 35359861 -31308144 + AluJo SINE Alu 4 130 -172 2037 154 0 0 chr20 35360151 35360463 -31307542 + AluSx SINE Alu 1 312 0 294 200 35 59 chr20 35360713 35360798 -31307207 + L1MB8 LINE L1 6058 6140 -38 515 226 58 19 chr20 35360861 35361016 -31306989 + AluJo SINE Alu 136 296 -16 2434 68 0 3 chr20 35361017 35361312 -31306693 - AluY SINE Alu -17 294 1 183 42 0 0 chr20 35361421 35361445 -31306560 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1312 172 93 7 chr20 35361558 35361683 -31306322 + AluSx SINE Alu 1 114 -198 2307 101 3 7 chr20 35361683 35361990 -31306015 + AluSp SINE Alu 1 306 -7 1312 172 93 7 chr20 35361990 35362143 -31305862 + AluSx SINE Alu 114 303 -9 1277 142 0 10 chr20 35362288 35362485 -31305520 - AluSx SINE Alu -117 195 1 267 146 21 0 chr20 35362523 35362571 -31305434 + MER58B DNA MER1_type 250 298 -43 1658 126 96 4 chr20 35362575 35362836 -31305169 + AluSq SINE Alu 3 287 -26 21 0 0 0 chr20 35362870 35362891 -31305114 + AT_rich Low_complexity Low_complexity 1 21 0 1726 152 55 14 chr20 35362951 35363240 -31304765 - AluSx SINE Alu -11 301 1 22 35 0 0 chr20 35363244 35363273 -31304732 + AT_rich Low_complexity Low_complexity 1 29 0 1729 161 14 7 chr20 35363645 35363930 -31304075 + AluSx SINE Alu 1 287 -25 1629 128 31 31 chr20 35364130 35364388 -31303617 - AluSc SINE Alu -51 258 1 864 205 12 0 chr20 35364484 35364645 -31303360 - FRAM SINE Alu -17 159 1 269 271 74 16 chr20 35365152 35365274 -31302731 + L1MB4 LINE L1 5900 6028 -152 2194 129 0 0 chr20 35365279 35365590 -31302415 + AluY SINE Alu 1 311 0 508 205 8 39 chr20 35365612 35365739 -31302266 - FLAM_A SINE Alu -9 133 11 2482 73 0 3 chr20 35365805 35366108 -31301897 + AluY SINE Alu 1 302 -9 2227 105 3 3 chr20 35366596 35366891 -31301114 - AluSq SINE Alu -18 295 1 1445 212 0 4 chr20 35366936 35367200 -31300805 + AluJb SINE Alu 25 287 -25 2125 122 20 0 chr20 35367203 35367499 -31300506 + AluSq SINE Alu 1 302 -11 25 0 0 0 chr20 35367961 35367986 -31300019 + AT_rich Low_complexity Low_complexity 1 25 0 25 75 0 0 chr20 35368325 35368378 -31299627 + AT_rich Low_complexity Low_complexity 1 53 0 691 152 9 0 chr20 35368385 35368497 -31299508 - L1PB2 LINE L1 -6 6145 6033 406 267 0 0 chr20 35368531 35368621 -31299384 - FLAM_A SINE Alu -21 121 32 845 124 0 0 chr20 35368621 35368734 -31299271 - AluSq/x SINE Alu -199 113 1 2193 116 0 6 chr20 35368806 35369117 -31298888 - AluSq SINE Alu -4 309 1 2184 119 7 0 chr20 35369281 35369584 -31298421 - AluY SINE Alu -6 305 1 1528 130 13 9 chr20 35369984 35370215 -31297790 - AluSg/x SINE Alu -15 297 66 1158 199 11 33 chr20 35370258 35370529 -31297476 + AluJo SINE Alu 44 308 -4 2013 113 7 20 chr20 35370640 35370796 -31297209 - AluSc SINE Alu -21 288 136 2410 65 10 16 chr20 35370796 35371105 -31296900 - AluSq SINE Alu -6 307 1 2013 113 7 20 chr20 35371105 35371240 -31296765 - AluSc SINE Alu -173 136 1 471 153 145 15 chr20 35371458 35371589 -31296416 + L1MA5 LINE L1 6151 6298 -2 2220 104 0 0 chr20 35371650 35371939 -31296066 + AluSg SINE Alu 1 289 -21 1775 171 7 0 chr20 35371949 35372264 -31295741 + AluSx SINE Alu 1 317 0 247 249 52 75 chr20 35372974 35373147 -31294858 - L1ME4a LINE L1 -23 6098 5930 193 240 91 50 chr20 35374134 35374255 -31293750 - MIR SINE MIR -47 215 90 2000 113 0 4 chr20 35375450 35375716 -31292289 + AluSg SINE Alu 22 286 -24 2118 130 3 0 chr20 35376175 35376474 -31291531 + AluSq SINE Alu 1 300 -13 1992 145 7 3 chr20 35376481 35376785 -31291220 + AluSx SINE Alu 3 307 -5 2351 88 0 7 chr20 35379808 35380104 -31287901 - AluSc SINE Alu -15 294 1 2007 115 7 11 chr20 35380142 35380263 -31287742 + AluSq SINE Alu 13 133 -180 2220 120 0 0 chr20 35380263 35380564 -31287441 + AluSg SINE Alu 1 301 -9 2007 115 7 11 chr20 35380564 35380728 -31287277 + AluSq SINE Alu 133 297 -16 2223 93 45 0 chr20 35380734 35381025 -31286980 + AluY SINE Alu 1 304 -7 1926 126 3 13 chr20 35381025 35381326 -31286679 + AluY SINE Alu 1 298 -13 770 113 0 0 chr20 35381327 35381442 -31286563 + AluSg/x SINE Alu 186 300 -9 2467 78 3 0 chr20 35384178 35384487 -31283518 - AluSq SINE Alu -3 310 1 291 140 0 0 chr20 35385141 35385191 -31282814 + (CTG)n Simple_repeat Simple_repeat 1 50 0 212 287 103 52 chr20 35386415 35386551 -31281454 + MIR3 SINE MIR 8 150 -58 188 255 0 0 chr20 35386679 35386726 -31281279 + MIR SINE MIR 168 214 -48 2035 115 33 10 chr20 35386958 35387262 -31280743 + AluSx SINE Alu 1 311 -1 1808 161 3 17 chr20 35387633 35387931 -31280074 + AluJo SINE Alu 3 296 -16 23 0 0 0 chr20 35388129 35388152 -31279853 + AT_rich Low_complexity Low_complexity 1 23 0 861 194 0 18 chr20 35388248 35388413 -31279592 - FRAM SINE Alu -22 154 1 2195 123 3 0 chr20 35388426 35388718 -31279287 + AluSp SINE Alu 1 293 -20 520 135 19 29 chr20 35388725 35388829 -31279176 - L1MA4 LINE L1 -26 6274 6172 608 72 0 0 chr20 35388829 35388912 -31279093 - AluSp/q SINE Alu -6 307 225 279 203 0 0 chr20 35388930 35388989 -31279016 + (TATATG)n Simple_repeat Simple_repeat 2 60 0 2321 98 0 3 chr20 35388990 35389287 -31278718 - AluSx SINE Alu -16 296 1 1709 182 10 0 chr20 35389287 35389578 -31278427 - AluJb SINE Alu -18 294 1 309 169 33 127 chr20 35389841 35389948 -31278057 - FRAM SINE Alu -14 152 70 2207 106 24 0 chr20 35389962 35390255 -31277750 - AluSx SINE Alu -12 300 1 1915 132 3 24 chr20 35390264 35390560 -31277445 - AluSx SINE Alu -22 290 1 1656 178 28 0 chr20 35390563 35390850 -31277155 - AluSx SINE Alu -16 296 2 2293 87 7 3 chr20 35390879 35391177 -31276828 + AluSx SINE Alu 1 299 -13 2385 84 0 3 chr20 35391519 35391815 -31276190 + AluY SINE Alu 1 295 -16 1888 150 30 3 chr20 35391926 35392226 -31275779 + AluSg SINE Alu 1 308 -2 741 156 8 0 chr20 35392394 35392516 -31275489 + AluJo/FLAM SINE Alu 1 123 -179 1452 196 11 11 chr20 35392516 35392797 -31275208 - AluJo SINE Alu -31 281 1 2372 79 23 0 chr20 35392890 35393194 -31274811 - AluSq SINE Alu -2 311 1 296 241 24 0 chr20 35393586 35393669 -31274336 - L1ME2 LINE L1 -1 6163 6079 631 218 0 0 chr20 35394217 35394341 -31273664 + FLAM_A SINE Alu 10 133 -9 2268 112 0 0 chr20 35394440 35394744 -31273261 + AluSg SINE Alu 2 305 -5 3095 158 12 49 chr20 35394757 35394937 -31273068 + L1MB5 LINE L1 5499 5684 -490 2054 129 24 0 chr20 35394937 35395224 -31272781 + AluSx SINE Alu 1 294 -18 3095 158 12 49 chr20 35395224 35395529 -31272476 + L1MB5 LINE L1 5684 5961 -213 2298 104 0 0 chr20 35395529 35395828 -31272177 + AluY SINE Alu 1 299 -12 3095 158 12 49 chr20 35395828 35395934 -31272071 + L1MB5 LINE L1 5961 6069 -105 482 123 61 61 chr20 35396912 35397026 -31270979 + L1MB5 LINE L1 6061 6174 0 618 198 9 17 chr20 35397035 35397151 -31270854 + AluJo SINE Alu 3 117 -195 1241 195 43 28 chr20 35397175 35397457 -31270548 - AluJo SINE Alu -26 286 1 867 227 0 5 chr20 35397487 35397672 -31270333 + AluJo SINE Alu 121 304 -8 2238 102 14 0 chr20 35397765 35398058 -31269947 + AluSg SINE Alu 1 297 -13 2326 97 3 7 chr20 35398098 35398407 -31269598 - AluSx SINE Alu 0 312 5 314 240 0 62 chr20 35398496 35398592 -31269413 - L1MC4 LINE L1 -1339 6703 6614 224 143 18 27 chr20 35398600 35398691 -31269314 + (TA)n Simple_repeat Simple_repeat 1 93 -18 2151 97 3 14 chr20 35398691 35398980 -31269025 - AluSg1 SINE Alu -23 286 1 224 143 18 27 chr20 35398980 35398999 -31269006 + (TA)n Simple_repeat Simple_repeat 93 111 0 363 179 18 89 chr20 35399007 35399119 -31268886 - L2 LINE L2 -30 3283 3180 1936 148 20 7 chr20 35399147 35399445 -31268560 + AluSx SINE Alu 1 302 -10 387 190 0 6 chr20 35399515 35399596 -31268409 + AluS SINE Alu 1 62 -239 255 31 0 0 chr20 35399598 35399630 -31268375 + (A)n Simple_repeat Simple_repeat 1 32 0 264 333 38 0 chr20 35399657 35399762 -31268243 - L2 LINE L2 -298 2974 2866 2093 115 4 0 chr20 35399841 35400119 -31267886 - AluSg SINE Alu -31 279 1 735 177 39 0 chr20 35400119 35400249 -31267756 - AluJo SINE Alu -176 136 2 1585 207 123 10 chr20 35400251 35400657 -31267348 + LTR50 LTR ERVL 344 795 0 236 258 34 56 chr20 35401063 35401152 -31266853 + MIR SINE MIR 173 259 -3 2158 93 4 4 chr20 35401152 35401456 -31266549 + AluSg SINE Alu 1 304 0 1908 118 3 59 chr20 35401456 35401779 -31266226 + Tigger1 DNA MER2_type 1167 1471 -947 1934 140 3 11 chr20 35401780 35402109 -31265896 - AluSx SINE Alu 0 327 1 539 194 0 11 chr20 35402130 35402223 -31265782 - FLAM_C SINE Alu -17 126 35 225 67 0 0 chr20 35402243 35402273 -31265732 + Tigger1 DNA MER2_type 1444 1473 -945 2173 123 7 0 chr20 35402294 35402594 -31265411 + AluSq SINE Alu 1 302 -11 1037 119 0 0 chr20 35402623 35402757 -31265248 + AluSq/x SINE Alu 1 134 -178 2075 114 7 20 chr20 35402760 35403066 -31264939 + AluSq SINE Alu 1 302 -11 957 162 27 0 chr20 35403111 35403259 -31264746 - FRAM SINE Alu -26 150 1 1921 136 31 17 chr20 35403269 35403563 -31264442 - AluSg SINE Alu -12 298 1 423 205 9 71 chr20 35403599 35403711 -31264294 - L1MC4a LINE L1 -1982 5826 5722 772 114 0 0 chr20 35403711 35403816 -31264189 + AluJ SINE Alu 21 125 -187 1794 172 0 7 chr20 35403824 35404114 -31263891 + AluJb SINE Alu 1 288 -24 41 0 0 0 chr20 35404120 35404161 -31263844 + AT_rich Low_complexity Low_complexity 1 41 0 909 187 11 22 chr20 35404161 35404343 -31263662 + AluJ SINE Alu 130 309 -3 22 70 0 0 chr20 35404414 35404457 -31263548 + AT_rich Low_complexity Low_complexity 1 43 0 1460 123 176 23 chr20 35404536 35404672 -31263333 + AluY SINE Alu 1 115 -186 1978 96 81 0 chr20 35404672 35404943 -31263062 + AluSc SINE Alu 1 293 -16 1460 123 176 23 chr20 35404943 35405067 -31262938 + AluY SINE Alu 115 301 0 1787 140 3 17 chr20 35405389 35405682 -31262323 + AluSp SINE Alu 24 312 -1 2010 108 0 25 chr20 35406075 35406390 -31261615 - AluSg SINE Alu -3 307 1 22 0 0 0 chr20 35406532 35406554 -31261451 + AT_rich Low_complexity Low_complexity 1 22 0 2072 117 3 19 chr20 35406554 35406871 -31261134 + AluSx SINE Alu 1 312 0 2405 67 0 13 chr20 35406910 35407223 -31260782 - AluSc SINE Alu 0 309 1 1840 132 21 11 chr20 35407254 35407567 -31260438 + AluSp SINE Alu 3 313 0 963 170 0 0 chr20 35407567 35407726 -31260279 + AluSq SINE Alu 134 292 -21 1776 128 82 0 chr20 35407770 35408052 -31259953 - AluSg SINE Alu -5 305 1 886 123 14 0 chr20 35408052 35408190 -31259815 - AluSq/x SINE Alu -168 145 6 1613 170 42 0 chr20 35408289 35408572 -31259433 + AluSg SINE Alu 1 295 -15 1803 147 0 11 chr20 35408576 35408926 -31259079 + AluSg SINE Alu 1 347 0 942 112 0 30 chr20 35408930 35409064 -31258941 + FLAM_C SINE Alu 1 130 -3 326 347 40 8 chr20 35409198 35409322 -31258683 - L2 LINE L2 -8 3264 3137 1271 122 54 131 chr20 35409352 35409687 -31258318 + AluYb8 SINE Alu 1 309 -9 2247 82 3 0 chr20 35409691 35409983 -31258022 + AluY SINE Alu 1 293 -18 321 283 71 18 chr20 35409986 35410099 -31257906 + L1MC4a LINE L1 5867 5985 -1823 920 149 0 0 chr20 35410099 35410240 -31257765 + FRAM SINE Alu 9 149 -27 1641 126 8 0 chr20 35410580 35410834 -31257171 - AluSx SINE Alu -56 256 1 2128 103 3 10 chr20 35410842 35411142 -31256863 - AluSx SINE Alu -14 298 1 250 351 144 0 chr20 35412612 35412723 -31255282 + L2 LINE L2 3145 3271 -1 396 208 0 13 chr20 35412938 35413015 -31254990 - U6 snRNA snRNA 0 107 32 2097 106 0 0 chr20 35413015 35413325 -31254680 - AluSx SINE Alu 0 310 1 831 121 0 0 chr20 35413503 35413627 -31254378 + FLAM_C SINE Alu 13 136 -7 2188 87 0 13 chr20 35413630 35413930 -31254075 + AluSg1 SINE Alu 1 296 -13 1501 170 30 4 chr20 35413947 35414212 -31253793 + AluJb SINE Alu 26 297 -15 325 196 0 0 chr20 35414212 35414263 -31253742 + AluJ/F(R)AM SINE Alu 134 184 -118 1074 139 0 6 chr20 35414263 35414435 -31253570 - AluJo SINE Alu -141 171 1 317 330 192 19 chr20 35414542 35414860 -31253145 - L2 LINE L2 -358 2956 2584 223 173 40 27 chr20 35415243 35415318 -31252687 + (CCGGG)n Simple_repeat Simple_repeat 4 79 0 21 89 0 0 chr20 35415489 35415545 -31252460 + GC_rich Low_complexity Low_complexity 1 56 0 2123 52 45 7 chr20 35417238 35417524 -31250481 - AluY SINE Alu -14 297 1 543 210 266 0 chr20 35418293 35418436 -31249569 - MER5A DNA MER1_type 0 189 9 2156 107 3 0 chr20 35418628 35418928 -31249077 + AluSg SINE Alu 1 301 -9 1604 174 14 0 chr20 35418986 35419262 -31248743 - AluJb SINE Alu -32 280 1 464 237 122 0 chr20 35419895 35420034 -31247971 + MIR3 SINE MIR 28 183 -25 1266 142 81 38 chr20 35420691 35420952 -31247053 + AluJo SINE Alu 5 276 -36 1272 165 0 13 chr20 35421224 35421454 -31246551 - AluSg/x SINE Alu -1 311 85 2144 100 0 10 chr20 35421624 35421925 -31246080 + AluSq SINE Alu 4 301 -12 1987 138 0 3 chr20 35422177 35422488 -31245517 - AluSg SINE Alu 0 310 1 2151 99 13 3 chr20 35422671 35422974 -31245031 - AluSx SINE Alu -6 306 1 373 218 240 34 chr20 35423067 35423246 -31244759 - MIR SINE MIR -28 234 19 2299 91 0 3 chr20 35423371 35423679 -31244326 - AluY SINE Alu -4 307 1 2210 105 0 6 chr20 35423688 35424002 -31244003 - AluSx SINE Alu 0 312 1 2021 108 14 0 chr20 35424003 35424289 -31243716 - AluSx SINE Alu -8 304 15 1781 128 75 0 chr20 35424293 35424574 -31243431 - AluSg SINE Alu -8 302 1 969 181 46 42 chr20 35424683 35424816 -31243189 - L1MB3 LINE L1 -9 6174 6038 1948 134 0 10 chr20 35424816 35425115 -31242890 + AluSx SINE Alu 1 296 -16 969 181 46 42 chr20 35425115 35425219 -31242786 - L1MB3 LINE L1 -145 6038 5936 1868 138 26 7 chr20 35425427 35425732 -31242273 - AluSx SINE Alu -1 311 1 189 257 35 71 chr20 35425768 35425881 -31242124 + MIR SINE MIR 12 120 -142 207 108 54 0 chr20 35425923 35425960 -31242045 + MIR SINE MIR 95 133 -129 1711 167 6 22 chr20 35426065 35426382 -31241623 + AluJo SINE Alu 1 312 0 1521 164 0 36 chr20 35426572 35426853 -31241152 - AluJo SINE Alu -15 297 27 2285 71 0 10 chr20 35426853 35427148 -31240857 + AluSp SINE Alu 1 292 -21 262 146 24 0 chr20 35427153 35427194 -31240811 - AluJo SINE Alu -260 42 1 2215 101 0 0 chr20 35427199 35427505 -31240500 - AluSg SINE Alu -4 306 1 2052 139 0 0 chr20 35427587 35427890 -31240115 - AluSx SINE Alu -9 303 1 260 273 169 19 chr20 35427905 35427922 -31240083 + MIR SINE MIR 2 15 -247 1653 169 3 3 chr20 35427922 35428217 -31239788 + AluJb SINE Alu 1 295 -17 260 273 169 19 chr20 35428217 35428411 -31239594 + MIR SINE MIR 15 259 -3 2107 115 0 0 chr20 35428468 35428773 -31239232 - AluSq SINE Alu -8 305 1 1916 89 107 4 chr20 35428934 35429215 -31238790 + AluSg SINE Alu 1 310 0 2075 88 0 14 chr20 35429260 35429564 -31238441 + AluSc SINE Alu 1 300 0 1895 120 3 3 chr20 35429575 35429858 -31238147 + AluSc SINE Alu 1 283 -26 1759 139 0 109 chr20 35430142 35430312 -31237693 - AluJo SINE Alu -1 301 114 342 0 0 0 chr20 35430312 35430350 -31237655 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2044 103 4 0 chr20 35430351 35430632 -31237373 - AluSp SINE Alu -31 282 1 1837 110 55 0 chr20 35430634 35430924 -31237081 - AluSg SINE Alu -4 306 1 1973 115 10 0 chr20 35430926 35431221 -31236784 - AluSx SINE Alu -4 308 11 1759 139 0 109 chr20 35431221 35431238 -31236767 - AluJo SINE Alu -190 112 95 2317 60 0 0 chr20 35431238 35431549 -31236456 - AluY SINE Alu 0 311 1 1759 139 0 109 chr20 35431549 35431689 -31236316 - AluJo SINE Alu -207 95 1 1951 118 10 0 chr20 35431740 35432028 -31235977 - AluSx SINE Alu -21 291 1 240 150 133 50 chr20 35432036 35432096 -31235909 - L2 LINE L2 -6 3266 3202 1903 101 16 57 chr20 35432287 35432603 -31235402 + AluSx SINE Alu 1 303 -9 2052 121 0 3 chr20 35432692 35432999 -31235006 - AluSg SINE Alu -4 306 1 1840 140 0 7 chr20 35433017 35433309 -31234696 - AluSq SINE Alu -22 291 2 783 259 52 38 chr20 35433331 35433362 -31234643 - MIR SINE MIR -24 238 209 2072 106 7 0 chr20 35433362 35433654 -31234351 - AluSx SINE Alu -18 294 1 783 259 52 38 chr20 35433654 35433866 -31234139 - MIR SINE MIR -53 209 2 218 266 11 85 chr20 35433984 35434001 -31234004 - L2 LINE L2 -558 2756 2739 2329 91 0 0 chr20 35434001 35434310 -31233695 - AluSg SINE Alu -1 309 1 218 266 11 85 chr20 35434310 35434362 -31233643 - L2 LINE L2 -575 2739 2694 384 266 70 70 chr20 35434362 35434561 -31233444 + MIR SINE MIR 2 200 -62 397 190 70 30 chr20 35434561 35434595 -31233410 + L1MC4 LINE L1 6607 6638 -1404 549 0 0 0 chr20 35434595 35434656 -31233349 + (TCTA)n Simple_repeat Simple_repeat 2 62 0 397 190 70 30 chr20 35434656 35434721 -31233284 + L1MC4 LINE L1 6638 6710 -1332 2107 110 3 3 chr20 35435334 35435642 -31232363 - AluSx SINE Alu -4 308 1 211 164 33 16 chr20 35435668 35435729 -31232276 + CT-rich Low_complexity Low_complexity 1 62 0 465 274 114 6 chr20 35435960 35436135 -31231870 - MIR SINE MIR -43 219 26 440 262 140 114 chr20 35436324 35436445 -31231560 + L2 LINE L2 2913 3029 -284 2331 85 0 3 chr20 35436445 35436750 -31231255 - AluSx SINE Alu -5 307 4 440 262 140 114 chr20 35436750 35436874 -31231131 + L2 LINE L2 3029 3148 -165 2031 101 10 3 chr20 35436874 35437171 -31230834 + AluSx SINE Alu 6 304 -8 2293 93 3 3 chr20 35437171 35437481 -31230524 + AluSp SINE Alu 1 310 -3 440 262 140 114 chr20 35437481 35437618 -31230387 + L2 LINE L2 3147 3307 -6 2224 102 3 0 chr20 35438067 35438370 -31229635 + AluSx SINE Alu 5 308 -4 320 266 58 79 chr20 35438374 35438396 -31229609 - MIR SINE MIR -8 254 233 1824 146 7 7 chr20 35438396 35438690 -31229315 - AluSx SINE Alu -18 294 1 320 266 58 79 chr20 35438690 35438806 -31229199 - MIR SINE MIR -29 233 119 472 196 196 31 chr20 35438835 35438998 -31229007 + MIR SINE MIR 16 205 -57 1982 101 7 7 chr20 35439014 35439301 -31228704 - AluSc SINE Alu -20 289 3 729 153 17 0 chr20 35440171 35440289 -31227716 - AluJb SINE Alu -179 133 14 361 176 0 11 chr20 35440293 35440360 -31227645 - Alu SINE Alu -248 51 1 2188 118 0 3 chr20 35440384 35440689 -31227316 + AluSx SINE Alu 1 304 -8 2137 105 0 13 chr20 35440790 35441103 -31226902 - AluSc SINE Alu 0 309 1 1456 185 10 24 chr20 35441284 35441582 -31226423 + AluJo SINE Alu 1 294 -18 2192 119 3 0 chr20 35441595 35441907 -31226098 - AluSp SINE Alu 0 313 1 1000 156 0 17 chr20 35441907 35442080 -31225925 - FRAM SINE Alu -7 169 1 1617 129 16 63 chr20 35442323 35442626 -31225379 + AluJo SINE Alu 1 289 -23 2236 90 3 0 chr20 35442818 35443118 -31224887 - AluSg SINE Alu -9 301 1 1132 122 17 6 chr20 35443425 35443605 -31224400 + AluSq SINE Alu 131 312 -1 1810 155 3 0 chr20 35443644 35443941 -31224064 + AluSx SINE Alu 3 300 -12 620 252 0 0 chr20 35444012 35444143 -31223862 - FLAM_A SINE Alu -2 131 1 251 263 190 36 chr20 35444197 35444334 -31223671 + L2 LINE L2 3156 3313 0 459 248 109 30 chr20 35445220 35445385 -31222620 + MIR SINE MIR 31 207 -36 877 144 98 0 chr20 35445499 35445652 -31222353 - AluSg/x SINE Alu -13 297 130 2328 76 0 3 chr20 35445809 35446113 -31221892 + AluSx SINE Alu 1 303 -9 2265 110 0 0 chr20 35446125 35446435 -31221570 + AluSg SINE Alu 1 310 0 1996 122 0 7 chr20 35446481 35446775 -31221230 - AluSx SINE Alu -17 295 4 257 193 23 23 chr20 35446827 35446915 -31221090 + (TATATG)n Simple_repeat Simple_repeat 4 91 0 810 176 0 0 chr20 35447025 35447150 -31220855 - FRAM SINE Alu -29 147 23 352 191 0 0 chr20 35447159 35447222 -31220783 - L1ME LINE L1 -353 5809 5747 1590 135 61 34 chr20 35447223 35447383 -31220622 - AluSx SINE Alu -7 305 132 2263 72 0 10 chr20 35447383 35447689 -31220316 - AluY SINE Alu -8 303 1 1590 135 61 34 chr20 35447689 35447825 -31220180 - AluSx SINE Alu -180 132 1 33 25 0 0 chr20 35447827 35447867 -31220138 + AT_rich Low_complexity Low_complexity 1 40 0 246 132 0 0 chr20 35447957 35447995 -31220010 + MER112 DNA MER1_type 18 55 -205 1627 154 3 40 chr20 35448032 35448356 -31219649 - AluSx SINE Alu 0 312 1 716 207 83 7 chr20 35448358 35448503 -31219502 - AluJo SINE Alu -8 294 139 1602 75 205 4 chr20 35448504 35448786 -31219219 - AluY SINE Alu 0 301 1 812 161 0 23 chr20 35448800 35448930 -31219075 - AluJo SINE Alu -172 130 4 252 278 0 0 chr20 35448933 35449005 -31219000 + MER112 DNA MER1_type 74 145 -115 2150 100 0 19 chr20 35449005 35449315 -31218690 - AluSg SINE Alu -5 305 2 1610 189 14 3 chr20 35449316 35449613 -31218392 - AluJb SINE Alu -11 301 2 455 271 59 42 chr20 35449615 35449903 -31218102 - L1M4 LINE L1 -1131 5015 4723 2468 63 0 0 chr20 35449945 35450248 -31217757 - AluY SINE Alu -8 303 1 536 305 101 34 chr20 35450259 35450504 -31217501 - L1M4 LINE L1 -1500 4646 4376 2057 113 7 7 chr20 35450504 35450806 -31217199 - AluSx SINE Alu -10 302 1 536 305 101 34 chr20 35450806 35450859 -31217146 - L1M4 LINE L1 -1770 4376 4328 454 231 68 56 chr20 35450860 35451111 -31216894 + L1MC5 LINE L1 7526 7779 -182 635 241 26 119 chr20 35451293 35451712 -31216293 - L1M4 LINE L1 -1896 4250 3871 2306 77 3 0 chr20 35451715 35452025 -31215980 - AluY SINE Alu 0 311 1 1810 138 30 20 chr20 35452124 35452420 -31215585 + AluSg SINE Alu 1 299 -11 2131 121 0 0 chr20 35452450 35452747 -31215258 + AluSx SINE Alu 1 297 -15 1390 168 13 0 chr20 35452755 35452993 -31215012 + AluJo SINE Alu 1 241 -71 1993 162 11 39 chr20 35452993 35453074 -31214931 + LTR28 LTR ERV1 1 83 -553 2213 110 0 0 chr20 35453074 35453383 -31214622 - AluSq SINE Alu -4 309 1 1993 162 11 39 chr20 35453383 35453696 -31214309 + LTR28 LTR ERV1 83 382 -254 446 256 74 8 chr20 35453697 35453818 -31214187 - MIR SINE MIR -103 159 31 189 0 0 0 chr20 35453877 35453898 -31214107 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 180 135 0 0 chr20 35454115 35454152 -31213853 + (TG)n Simple_repeat Simple_repeat 2 38 0 2268 93 0 0 chr20 35454196 35454498 -31213507 - AluSc SINE Alu -7 302 1 1891 122 20 10 chr20 35454599 35454893 -31213112 - AluSq SINE Alu -16 297 1 2400 54 0 10 chr20 35454913 35455226 -31212779 - AluY SINE Alu -1 310 1 339 272 124 43 chr20 35455232 35455489 -31212516 - L1MC3 LINE L1 -32 7753 7476 717 54 0 0 chr20 35455494 35455587 -31212418 + AluY SINE Alu 204 296 -15 319 259 77 33 chr20 35455587 35456120 -31211885 - L1MC5 LINE L1 -481 7491 7064 2291 69 3 20 chr20 35456120 35456426 -31211579 - AluY SINE Alu -10 301 1 319 259 77 33 chr20 35456426 35456731 -31211274 - L1MC5 LINE L1 -908 7064 6774 1986 106 0 0 chr20 35456731 35456987 -31211018 + AluSg SINE Alu 1 256 -54 269 88 0 0 chr20 35456990 35457024 -31210981 + AluSp/q SINE Alu 225 258 -45 616 102 0 0 chr20 35457027 35457115 -31210890 + Alu SINE Alu 222 309 0 326 197 121 15 chr20 35457125 35457220 -31210785 + FRAM SINE Alu 74 175 0 386 279 93 16 chr20 35457243 35457372 -31210633 - L1MC4a LINE L1 -1105 6703 6565 2198 104 10 0 chr20 35457372 35457670 -31210335 - AluSx SINE Alu -11 301 1 244 196 0 0 chr20 35457697 35457743 -31210262 + Alu SINE Alu 256 301 -7 2657 18 0 0 chr20 35457745 35458067 -31209938 + AluYa5 SINE Alu 1 322 0 2029 127 0 3 chr20 35458067 35458350 -31209655 + AluSx SINE Alu 1 282 -30 198 103 0 0 chr20 35458360 35458389 -31209616 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 1366 178 89 41 chr20 35458449 35458613 -31209392 + AluSx SINE Alu 1 187 -125 2125 112 0 10 chr20 35458613 35458917 -31209088 - AluY SINE Alu -9 302 2 1366 178 89 41 chr20 35458917 35459044 -31208961 + AluSx SINE Alu 187 306 -6 244 35 0 0 chr20 35459073 35459102 -31208903 - L1MA9 LINE L1 -4 6308 6280 2001 137 0 3 chr20 35459115 35459408 -31208597 - AluSc SINE Alu -17 292 1 2090 113 7 23 chr20 35459596 35459905 -31208100 - AluSq SINE Alu -9 304 1 2219 109 3 3 chr20 35459941 35460243 -31207762 - AluSg SINE Alu -8 302 1 2081 124 0 0 chr20 35460338 35460640 -31207365 - AluSx SINE Alu 0 302 1 1589 181 7 20 chr20 35460666 35460970 -31207035 + AluJb SINE Alu 1 300 -12 739 218 0 0 chr20 35460979 35461112 -31206893 + FLAM_C SINE Alu 1 133 0 39 22 0 0 chr20 35461112 35461158 -31206847 + AT_rich Low_complexity Low_complexity 1 46 0 1959 114 44 11 chr20 35461158 35461459 -31206546 + AluSx SINE Alu 4 313 0 355 151 0 0 chr20 35461464 35461517 -31206488 + AluJb SINE Alu 181 233 -69 1199 147 6 0 chr20 35461517 35461694 -31206311 - AluJo SINE Alu -115 197 20 1902 151 14 3 chr20 35461706 35461990 -31206015 - AluJo SINE Alu -25 287 1 225 0 0 0 chr20 35462080 35462105 -31205900 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2079 113 0 0 chr20 35462109 35462384 -31205621 - AluSx SINE Alu -37 275 1 261 0 0 0 chr20 35462802 35462831 -31205174 + (TG)n Simple_repeat Simple_repeat 2 30 0 626 284 60 5 chr20 35463024 35463242 -31204763 - MIR SINE MIR -2 260 31 906 272 37 50 chr20 35463443 35463599 -31204406 - L2 LINE L2 -52 3261 3104 2400 92 0 3 chr20 35463599 35463902 -31204103 - AluY SINE Alu -9 302 1 906 272 37 50 chr20 35463902 35464312 -31203693 - L2 LINE L2 -209 3104 2697 1964 111 61 4 chr20 35464320 35464599 -31203406 + AluSq SINE Alu 1 295 -18 1114 195 0 37 chr20 35464608 35464823 -31203182 + AluSg/x SINE Alu 87 293 -19 1325 271 45 9 chr20 35464827 35465273 -31202732 - L2 LINE L2 -623 2691 2230 1657 143 12 78 chr20 35465275 35465597 -31202408 + AluJo SINE Alu 1 301 -11 1343 142 30 60 chr20 35465640 35465705 -31202300 - L1MC1 LINE L1 -5 6328 6263 2023 130 3 40 chr20 35465705 35466027 -31201978 + AluJo SINE Alu 1 310 -2 1343 142 30 60 chr20 35466027 35466229 -31201776 - L1MC1 LINE L1 -70 6263 6069 266 197 66 0 chr20 35466336 35466397 -31201608 + MER46A DNA MER2_type 90 154 -82 2312 204 45 73 chr20 35466397 35466472 -31201533 - L1ME1 LINE L1 -37 6129 6053 1661 158 0 95 chr20 35466472 35466808 -31201197 + AluJo SINE Alu 1 304 -8 2312 204 45 73 chr20 35466808 35467392 -31200613 - L1ME1 LINE L1 -113 6053 5488 2719 165 93 48 chr20 35467416 35467480 -31200525 - L1MB7 LINE L1 0 6184 6124 2487 78 0 0 chr20 35467480 35467774 -31200231 + AluSc SINE Alu 1 294 -15 2719 165 93 48 chr20 35467774 35468333 -31199672 - L1MB7 LINE L1 -60 6124 5533 667 188 8 15 chr20 35468342 35468475 -31199530 - FLAM_A SINE Alu -1 132 1 315 231 55 0 chr20 35468489 35468580 -31199425 - L2 LINE L2 -1916 1398 1303 545 163 0 0 chr20 35468626 35468712 -31199293 - AluJ/FLAM SINE Alu -226 86 1 789 253 6 0 chr20 35468809 35468971 -31199034 - FAM SINE Alu -12 163 1 615 262 99 0 chr20 35468996 35469168 -31198837 - L1ME3 LINE L1 -2 6160 5972 2104 99 11 0 chr20 35469214 35469497 -31198508 - AluSq SINE Alu -27 286 1 586 226 77 0 chr20 35469501 35469669 -31198336 - L2 LINE L2 -2088 1226 1046 184 247 37 74 chr20 35469883 35469964 -31198041 - L2 LINE L2 -1 3271 3194 1142 103 0 0 chr20 35470281 35470426 -31197579 - AluSp SINE Alu -39 274 130 2518 63 3 0 chr20 35470656 35470956 -31197049 + AluY SINE Alu 1 301 -10 2301 81 3 3 chr20 35471165 35471477 -31196528 - AluSp SINE Alu 0 312 1 1221 219 165 6 chr20 35472025 35472358 -31195647 - MLT1F LTR MaLR -2 540 155 635 143 0 86 chr20 35472368 35472494 -31195511 - L1MB3 LINE L1 -9 6174 6060 2011 128 26 7 chr20 35472494 35472800 -31195205 - AluSx SINE Alu 0 312 1 635 143 0 86 chr20 35472800 35472813 -31195192 - L1MB3 LINE L1 -123 6060 6047 262 265 0 0 chr20 35472816 35472865 -31195140 - FLAM SINE Alu -17 116 68 710 157 17 0 chr20 35472866 35472981 -31195024 + AluJb SINE Alu 1 117 -195 520 158 0 0 chr20 35472979 35473055 -31194950 - AluJ/FLAM SINE Alu -235 77 2 * 2217 114 3 3 chr20 35473061 35473367 -31194638 - AluSx SINE Alu -6 306 1 2233 155 47 33 chr20 35473369 35473796 -31194209 - L1MB3 LINE L1 -127 6056 5624 1163 100 0 12 chr20 35473871 35474041 -31193964 - L1PA11 LINE L1 0 6174 6007 581 274 110 0 chr20 35474047 35474193 -31193812 - MLT1F LTR MaLR -390 177 16 300 111 0 0 chr20 35474275 35474320 -31193685 + (TCCC)n Simple_repeat Simple_repeat 4 48 0 1483 174 21 39 chr20 35474337 35474618 -31193387 - AluJo SINE Alu -36 276 1 1556 156 93 15 chr20 35474625 35474894 -31193111 - AluJo SINE Alu -22 290 1 187 281 0 31 chr20 35475309 35475373 -31192632 + L2 LINE L2 2976 3037 -235 224 246 169 21 chr20 35475591 35475733 -31192272 - L2 LINE L2 -117 3196 3034 2364 99 0 10 chr20 35475921 35476225 -31191780 + AluSg SINE Alu 1 301 -9 280 261 0 0 chr20 35476237 35476302 -31191703 + L2 LINE L2 3200 3264 -8 2318 92 0 0 chr20 35476931 35477240 -31190765 + AluSg SINE Alu 1 309 0 2407 86 7 0 chr20 35477401 35477704 -31190301 - AluSp SINE Alu -8 305 1 242 257 29 0 chr20 35477855 35477925 -31190080 + L2 LINE L2 3200 3271 -1 2344 86 0 3 chr20 35478148 35478440 -31189565 + AluSc SINE Alu 1 291 -18 386 344 62 42 chr20 35478536 35478803 -31189202 + L1M4 LINE L1 3604 3881 -2265 2206 108 3 3 chr20 35478803 35479114 -31188891 + AluSx SINE Alu 3 313 0 386 344 62 42 chr20 35479114 35479152 -31188853 + L1M4 LINE L1 3881 3917 -2229 1579 182 3 34 chr20 35479175 35479471 -31188534 - AluJo SINE Alu -25 287 1 649 224 29 17 chr20 35479472 35479646 -31188359 - L1MC4a LINE L1 -1859 5949 5774 21 53 0 35 chr20 35479688 35479717 -31188288 + AT_rich Low_complexity Low_complexity 1 29 -26 2416 54 7 10 chr20 35479717 35480015 -31187990 + AluY SINE Alu 2 298 -13 21 53 0 35 chr20 35480015 35480042 -31187963 + AT_rich Low_complexity Low_complexity 29 55 0 1885 150 16 22 chr20 35480042 35480355 -31187650 + AluJb SINE Alu 1 311 -1 22 35 0 0 chr20 35480404 35480433 -31187572 + AT_rich Low_complexity Low_complexity 1 29 0 436 175 0 0 chr20 35480723 35480803 -31187202 - MER116 DNA Mariner 0 80 1 1960 135 3 20 chr20 35481860 35482164 -31185841 + AluJo SINE Alu 1 299 -13 2481 75 0 3 chr20 35482262 35482569 -31185436 + AluY SINE Alu 1 306 -5 233 229 0 0 chr20 35483075 35483123 -31184882 - L2 LINE L2 -4 3309 3262 250 258 77 77 chr20 35483557 35483766 -31184239 - LTR67 LTR ERVL -29 528 320 213 39 0 0 chr20 35483805 35483831 -31184174 + (CAG)n Simple_repeat Simple_repeat 1 26 0 189 185 148 0 chr20 35483832 35483886 -31184119 + MER5A DNA MER1_type 48 109 -80 229 249 91 86 chr20 35484129 35484201 -31183804 - L1MC4a LINE L1 -1814 5994 5924 1536 178 7 51 chr20 35484201 35484494 -31183511 + AluJb SINE Alu 1 280 -32 216 0 0 0 chr20 35484494 35484518 -31183487 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 229 249 91 86 chr20 35484518 35484641 -31183364 - L1MC4a LINE L1 -1883 5925 5797 2300 113 0 0 chr20 35484643 35484952 -31183053 + AluSc SINE Alu 1 309 0 203 273 101 71 chr20 35485098 35485217 -31182788 - MIR SINE MIR -44 218 88 2093 94 25 4 chr20 35485217 35485515 -31182490 + AluSx SINE Alu 1 304 0 203 273 101 71 chr20 35485515 35485592 -31182413 - MIR SINE MIR -174 88 15 1609 97 31 0 chr20 35486061 35486287 -31181718 - AluSg/x SINE Alu -11 301 69 230 180 0 40 chr20 35486290 35486340 -31181665 + L2 LINE L2 3234 3281 -32 2260 105 0 13 chr20 35486391 35486697 -31181308 + AluSg SINE Alu 1 302 -8 1764 154 22 4 chr20 35486744 35487017 -31180988 - AluJb SINE Alu -20 292 15 538 136 12 0 chr20 35487174 35487255 -31180750 - MER51A LTR ERV1 -83 551 470 2129 120 0 0 chr20 35487256 35487555 -31180450 - AluY SINE Alu -12 299 1 186 71 0 0 chr20 35487557 35487585 -31180420 + (T)n Simple_repeat Simple_repeat 1 28 0 432 0 0 0 chr20 35487697 35487745 -31180260 + (CA)n Simple_repeat Simple_repeat 1 48 0 512 252 29 80 chr20 35488042 35488356 -31179649 - L1ME1 LINE L1 -31 6135 5838 792 69 0 52 chr20 35488401 35488517 -31179488 - L1PA3 LINE L1 0 6155 6046 1436 168 12 81 chr20 35488517 35488838 -31179167 - AluJo SINE Alu -13 299 1 1707 170 51 0 chr20 35488924 35489218 -31178787 - AluSx SINE Alu -3 309 1 2038 103 57 0 chr20 35489336 35489617 -31178388 - AluSx SINE Alu -15 297 1 1836 174 135 12 chr20 35489931 35490338 -31177667 - MSTB2 LTR MaLR 0 457 1 1989 125 52 0 chr20 35491416 35491704 -31176301 - AluSg SINE Alu -7 303 1 1752 177 13 13 chr20 35491730 35492029 -31175976 + AluJo SINE Alu 1 299 -13 1329 121 0 11 chr20 35493450 35493640 -31174365 - AluSx SINE Alu 0 312 125 261 0 0 0 chr20 35493739 35493768 -31174237 + (T)n Simple_repeat Simple_repeat 1 29 0 688 141 0 0 chr20 35494111 35494210 -31173795 - AluSx SINE Alu -176 136 38 2199 114 3 7 chr20 35494787 35495085 -31172920 + AluSx SINE Alu 1 297 -15 393 278 65 51 chr20 35495127 35495343 -31172662 - MIR SINE MIR -16 246 28 2329 95 0 0 chr20 35495756 35496050 -31171955 - AluSg SINE Alu -16 294 1 2451 78 7 0 chr20 35496096 35496404 -31171601 + AluSx SINE Alu 3 312 0 772 125 0 0 chr20 35496406 35496518 -31171487 - HY1 scRNA scRNA 0 112 1 1410 174 3 79 chr20 35496616 35496903 -31171102 + AluJo SINE Alu 2 264 -48 2381 99 3 0 chr20 35496903 35497207 -31170798 - AluSx SINE Alu -7 305 1 1410 174 3 79 chr20 35497207 35497235 -31170770 + AluJo SINE Alu 264 293 -19 30 0 0 0 chr20 35498628 35498658 -31169347 + AT_rich Low_complexity Low_complexity 1 30 0 2492 97 37 20 chr20 35498658 35498820 -31169185 - L1MA3 LINE L1 0 6305 6147 2158 128 0 16 chr20 35498820 35499132 -31168873 - AluSx SINE Alu -5 307 1 2492 97 37 20 chr20 35499132 35499370 -31168635 - L1MA3 LINE L1 -158 6147 5898 860 199 27 11 chr20 35499482 35499668 -31168337 - MER5A DNA MER1_type 0 189 1 2206 82 3 20 chr20 35500722 35501025 -31166980 - AluSg SINE Alu 0 310 13 2254 115 0 7 chr20 35501722 35502026 -31165979 - AluSx SINE Alu -10 302 1 2012 129 10 10 chr20 35502695 35502998 -31165007 - AluSx SINE Alu -9 303 1 1947 136 14 0 chr20 35503084 35503370 -31164635 - AluSx SINE Alu -22 290 1 2239 121 0 7 chr20 35503391 35503696 -31164309 - AluSx SINE Alu -9 303 1 460 240 111 80 chr20 35504390 35504914 -31163091 - L1ME4a LINE L1 -21 6100 5514 203 283 124 18 chr20 35505049 35505162 -31162843 - L2 LINE L2 -35 3278 3154 1921 156 3 19 chr20 35505599 35505907 -31162098 + AluJo SINE Alu 1 303 -9 336 264 40 24 chr20 35507294 35507419 -31160586 - Charlie2a DNA MER1_type 0 2862 2736 698 200 0 0 chr20 35507443 35507558 -31160447 + FLAM_A SINE Alu 1 115 -18 405 0 0 0 chr20 35507561 35507606 -31160399 + (CA)n Simple_repeat Simple_repeat 2 46 0 402 236 132 22 chr20 35507607 35507789 -31160216 - Charlie2a DNA MER1_type -1213 1649 1448 846 165 47 12 chr20 35507901 35508071 -31159934 + MER33 DNA MER1_type 1 170 -88 1825 102 0 28 chr20 35508077 35508332 -31159673 + AluSq SINE Alu 21 268 -45 1302 156 5 14 chr20 35508369 35508580 -31159425 + AluJo SINE Alu 1 209 -103 24 0 0 0 chr20 35508580 35508604 -31159401 + AT_rich Low_complexity Low_complexity 1 24 0 1908 153 20 3 chr20 35508651 35508952 -31159053 - AluJb SINE Alu -5 307 2 514 77 0 0 chr20 35509015 35509080 -31158925 + AluSq/x SINE Alu 71 135 -177 2126 119 0 3 chr20 35509080 35509396 -31158609 + AluSx SINE Alu 1 315 0 604 187 205 6 chr20 35509457 35509623 -31158382 + MER105 DNA DNA 5 203 -1 598 220 45 141 chr20 35509627 35509918 -31158087 - Charlie2 DNA MER1_type -2584 278 16 209 333 51 22 chr20 35510070 35510208 -31157797 + MER5A DNA MER1_type 47 188 -1 2178 122 0 3 chr20 35510418 35510714 -31157291 - AluSx SINE Alu -17 295 1 183 209 19 38 chr20 35510914 35511019 -31156986 + CT-rich Low_complexity Low_complexity 5 107 0 2326 93 3 0 chr20 35511165 35511455 -31156550 + AluSp SINE Alu 1 291 -22 1946 117 14 31 chr20 35511473 35511763 -31156242 + AluSx SINE Alu 2 286 -26 264 59 0 0 chr20 35511763 35511797 -31156208 + (CAAG)n Simple_repeat Simple_repeat 2 35 0 2109 122 0 0 chr20 35511962 35512256 -31155749 + AluSx SINE Alu 1 294 -18 25 51 0 0 chr20 35512497 35512536 -31155469 + AT_rich Low_complexity Low_complexity 1 39 0 2151 122 0 40 chr20 35513031 35513176 -31154829 + AluSx SINE Alu 1 150 -162 2562 74 0 0 chr20 35513176 35513485 -31154520 + AluY SINE Alu 1 309 -2 2151 122 0 40 chr20 35513485 35513660 -31154345 + AluSx SINE Alu 150 308 -4 24 0 0 0 chr20 35513711 35513735 -31154270 + AT_rich Low_complexity Low_complexity 1 24 0 2047 210 107 61 chr20 35515091 35515394 -31152611 - L1MDa LINE L1 -2793 3747 3459 2222 112 0 0 chr20 35515394 35515690 -31152315 + AluSx SINE Alu 1 296 -16 2047 210 107 61 chr20 35515690 35516259 -31151746 - L1MDa LINE L1 -3081 3459 2835 2116 132 3 0 chr20 35516259 35516554 -31151451 - AluSx SINE Alu -16 296 1 526 243 148 67 chr20 35516554 35516612 -31151393 - L1MDa LINE L1 -4001 2539 2487 1710 97 0 4 chr20 35516612 35516840 -31151165 - AluSg/x SINE Alu -2 310 84 526 243 148 67 chr20 35516840 35517121 -31150884 - L1MDa LINE L1 -4053 2487 2230 2133 117 3 29 chr20 35517121 35517429 -31150576 - AluSq SINE Alu -13 300 1 526 243 148 67 chr20 35517429 35517633 -31150372 - L1MDa LINE L1 -4310 2230 1945 1156 151 0 0 chr20 35517643 35517809 -31150196 - AluJb SINE Alu -18 294 129 1373 165 15 53 chr20 35517983 35518249 -31149756 + AluJb SINE Alu 27 282 -30 2331 110 0 0 chr20 35518269 35518570 -31149435 + AluSx SINE Alu 1 301 -11 2356 86 3 7 chr20 35519442 35519743 -31148262 + AluSx SINE Alu 1 300 -12 2115 87 35 45 chr20 35519842 35519978 -31148027 + AluSq SINE Alu 1 137 -176 2614 56 0 3 chr20 35519978 35520284 -31147721 + AluY SINE Alu 1 305 -6 2115 87 35 45 chr20 35520284 35520457 -31147548 + AluSq SINE Alu 137 307 -6 935 104 15 0 chr20 35520593 35520728 -31147277 - AluSg/x SINE Alu 0 312 176 661 163 8 8 chr20 35520730 35520853 -31147152 - FRAM SINE Alu -12 164 42 380 89 0 0 chr20 35522895 35522951 -31145054 + AluJb SINE Alu 78 133 -169 809 204 28 22 chr20 35522990 35523171 -31144834 + AluJb SINE Alu 131 312 0 426 186 87 116 chr20 35523684 35523836 -31144169 - L1MD3 LINE L1 0 8042 7887 2164 124 3 7 chr20 35523836 35524134 -31143871 + AluSx SINE Alu 5 301 -11 426 186 87 116 chr20 35524134 35524202 -31143803 - L1MD3 LINE L1 -155 7887 7839 2400 87 0 10 chr20 35524202 35524511 -31143494 - AluSx SINE Alu -6 306 1 426 186 87 116 chr20 35524511 35524532 -31143473 - L1MD3 LINE L1 -203 7839 7819 1384 105 0 0 chr20 35524543 35524724 -31143281 + AluSg/x SINE Alu 132 312 0 417 100 0 0 chr20 35524731 35524791 -31143214 - L1MC4 LINE L1 -211 7831 7772 190 206 237 0 chr20 35525001 35525104 -31142901 + L2 LINE L2 2783 2907 -365 1603 175 46 0 chr20 35525589 35525869 -31142136 - AluJo SINE Alu -19 293 1 2211 131 0 3 chr20 35525898 35526210 -31141795 + AluSx SINE Alu 1 311 -1 1043 169 0 6 chr20 35526216 35526388 -31141617 + FRAM SINE Alu 1 166 -10 372 206 11 22 chr20 35526395 35526487 -31141518 - L1ME LINE L1 -314 5807 5717 1794 167 3 14 chr20 35526601 35526895 -31141110 - AluJb SINE Alu -21 291 1 1288 173 132 103 chr20 35527848 35527981 -31140024 - L1MC4 LINE L1 -11 8031 7903 2235 121 0 10 chr20 35527981 35528287 -31139718 - AluSx SINE Alu -9 303 1 1288 173 132 103 chr20 35528287 35528594 -31139411 - L1MC4 LINE L1 -139 7903 7589 306 50 0 0 chr20 35528621 35528661 -31139344 + (T)n Simple_repeat Simple_repeat 1 40 0 2527 182 59 22 chr20 35528668 35529260 -31138745 - L1MC4 LINE L1 -440 7602 6989 1988 112 52 7 chr20 35529293 35529579 -31138426 - AluSx SINE Alu -13 299 1 1641 227 141 70 chr20 35530397 35530812 -31137193 - MLT1E LTR MaLR -8 585 120 834 131 14 21 chr20 35530812 35530957 -31137048 + U4 snRNA snRNA 1 144 -1 1641 227 141 70 chr20 35530957 35531087 -31136918 - MLT1E LTR MaLR -473 120 1 2400 86 3 3 chr20 35531131 35531434 -31136571 - AluSp SINE Alu -10 303 1 762 120 0 17 chr20 35531792 35531909 -31136096 + FLAM_C SINE Alu 3 117 -16 28 0 0 0 chr20 35531909 35531937 -31136068 + AT_rich Low_complexity Low_complexity 1 28 0 2211 128 3 0 chr20 35532159 35532465 -31135540 - AluSg SINE Alu -1 309 3 2175 138 0 3 chr20 35532505 35532816 -31135189 - AluSx SINE Alu -2 310 1 30 0 0 0 chr20 35532864 35532894 -31135111 + AT_rich Low_complexity Low_complexity 1 30 0 1912 149 3 7 chr20 35532894 35533182 -31134823 - AluSx SINE Alu -25 287 1 1785 161 7 17 chr20 35533185 35533483 -31134522 - AluJb SINE Alu -17 295 1 2039 119 3 11 chr20 35533751 35534081 -31133924 + AluSx SINE Alu 1 328 0 194 207 103 0 chr20 35534124 35534182 -31133823 - MIR SINE MIR -94 168 105 2264 110 0 0 chr20 35534248 35534547 -31133458 + AluSx SINE Alu 1 299 -13 2069 98 3 27 chr20 35534977 35535195 -31132810 - AluSq SINE Alu 0 346 137 2114 108 3 66 chr20 35535195 35535528 -31132477 - AluSx SINE Alu 0 312 1 2069 98 3 27 chr20 35535528 35535662 -31132343 - AluSq SINE Alu -209 137 1 2071 131 24 0 chr20 35536467 35536757 -31131248 - AluSq SINE Alu -16 297 1 2263 109 0 3 chr20 35536766 35537069 -31130936 - AluSq SINE Alu -11 302 1 284 318 155 8 chr20 35537117 35537362 -31130643 + L3 LINE CR1 916 1196 -381 527 249 223 0 chr20 35537769 35537966 -31130039 - MIR SINE MIR -16 246 6 1916 123 17 17 chr20 35538009 35538173 -31129832 - AluSx SINE Alu -13 299 133 2201 138 0 0 chr20 35538173 35538477 -31129528 - AluSx SINE Alu -8 304 1 1916 123 17 17 chr20 35538477 35538605 -31129400 - AluSx SINE Alu -178 134 7 243 143 24 0 chr20 35538624 35538666 -31129339 + MER116 DNA Mariner 38 80 0 2221 121 3 3 chr20 35538835 35539140 -31128865 - AluSq SINE Alu -8 305 1 297 0 0 0 chr20 35539235 35539268 -31128737 + (TG)n Simple_repeat Simple_repeat 2 34 0 1900 106 58 20 chr20 35539681 35539973 -31128032 + AluSq SINE Alu 1 303 -10 1377 175 4 32 chr20 35540200 35540452 -31127553 - AluJo SINE Alu -25 287 43 1474 136 21 0 chr20 35540460 35540703 -31127302 - L1MA5 LINE L1 -2 6298 6051 2431 85 0 3 chr20 35540713 35541018 -31126987 - AluY SINE Alu -5 306 3 2320 79 4 0 chr20 35541021 35541324 -31126681 - AluSx SINE Alu 0 308 5 1877 156 3 20 chr20 35541579 35541755 -31126250 - AluSx SINE Alu -2 310 140 2347 113 0 0 chr20 35541755 35542064 -31125941 - AluSq SINE Alu -4 309 1 1877 156 3 20 chr20 35542064 35542188 -31125817 - AluSx SINE Alu -172 140 15 222 37 0 0 chr20 35542210 35542237 -31125768 + (TTTTTA)n Simple_repeat Simple_repeat 2 28 0 1033 223 29 52 chr20 35543692 35543705 -31124300 + L1ME3A LINE L1 5862 5874 -296 2118 114 0 10 chr20 35543705 35543994 -31124011 + AluSx SINE Alu 1 286 -26 1033 223 29 52 chr20 35543994 35544289 -31123716 + L1ME3A LINE L1 5874 6163 -7 2143 112 35 0 chr20 35544299 35544586 -31123419 + AluSx SINE Alu 4 300 -12 566 308 72 0 chr20 35545822 35546017 -31121988 + MIR SINE MIR 38 246 -16 317 187 0 33 chr20 35546158 35546249 -31121756 + T-rich Low_complexity Low_complexity 3 90 0 1858 116 0 0 chr20 35547431 35547681 -31120324 - AluSx SINE Alu -5 307 58 256 294 31 94 chr20 35547805 35547921 -31120084 + MIR3 SINE MIR 11 133 -75 348 24 0 0 chr20 35547921 35547962 -31120043 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 2383 106 3 0 chr20 35547966 35548278 -31119727 - AluSp SINE Alu 0 313 1 256 294 31 94 chr20 35548278 35548316 -31119689 + MIR3 SINE MIR 136 160 -48 1478 209 73 31 chr20 35548486 35548841 -31119164 + MLT1A2 LTR MaLR 1 370 -4 334 255 88 0 chr20 35549794 35549896 -31118109 - MLT1J LTR MaLR -249 262 152 399 236 45 9 chr20 35550708 35550818 -31117187 - MIR SINE MIR 0 262 149 559 233 136 10 chr20 35550831 35551134 -31116871 - L1 LINE L1 -3333 2813 2451 263 268 34 38 chr20 35551142 35551269 -31116736 - MIR SINE MIR -68 140 19 354 274 67 34 chr20 35551784 35551963 -31116042 + L2 LINE L2 2713 2897 -417 1607 226 53 10 chr20 35551964 35552362 -31115643 - L1M4 LINE L1 -1772 4374 3960 542 93 13 0 chr20 35552375 35552450 -31115555 + MADE1 DNA Mariner 1 76 -4 383 210 50 25 chr20 35552454 35552573 -31115432 + L2 LINE L2 3192 3313 0 406 253 36 47 chr20 35553001 35553151 -31114854 + MIR SINE MIR 42 195 -63 239 208 21 0 chr20 35553230 35553278 -31114727 + MER5B DNA MER1_type 13 61 -117 1342 144 55 23 chr20 35553280 35553536 -31114469 + L1MB5 LINE L1 5856 6119 -55 1793 243 34 40 chr20 35553556 35553777 -31114228 - L1ME1 LINE L1 -7 6159 5938 1879 136 34 24 chr20 35553777 35554072 -31113933 - AluSx SINE Alu -12 300 3 1793 243 34 40 chr20 35554072 35554190 -31113815 - L1ME1 LINE L1 -228 5938 5821 2474 66 0 7 chr20 35554190 35554495 -31113510 - AluY SINE Alu -8 303 1 1793 243 34 40 chr20 35554495 35554722 -31113283 - L1ME1 LINE L1 -345 5821 5596 220 325 48 63 chr20 35554738 35554809 -31113196 - L2 LINE L2 -1317 1997 1926 2232 122 0 0 chr20 35554809 35555112 -31112893 - AluSx SINE Alu -9 303 1 220 325 48 63 chr20 35555112 35555123 -31112882 - L2 LINE L2 -1388 1926 1916 2451 81 7 0 chr20 35555123 35555430 -31112575 - AluSg SINE Alu 0 310 2 220 325 48 63 chr20 35555430 35555598 -31112407 - L2 LINE L2 -1398 1916 1750 241 154 77 0 chr20 35555618 35555670 -31112335 + L1MB5 LINE L1 6113 6168 -6 2160 96 0 0 chr20 35555703 35555974 -31112031 + AluSx SINE Alu 1 271 -41 247 174 0 0 chr20 35555991 35556037 -31111968 + MER5B DNA MER1_type 133 178 0 526 206 118 7 chr20 35556053 35556189 -31111816 - MER58B DNA MER1_type -9 332 182 214 301 0 36 chr20 35556407 35556490 -31111515 + GA-rich Low_complexity Low_complexity 5 84 0 968 200 54 0 chr20 35557402 35557607 -31110398 - Tigger1 DNA MER2_type 0 2418 2203 782 227 29 5 chr20 35557608 35557815 -31110190 + L1 LINE L1 5088 5299 -847 1944 118 10 7 chr20 35557836 35558133 -31109872 + AluSx SINE Alu 1 298 -14 295 209 19 0 chr20 35558146 35558251 -31109754 + (TA)n Simple_repeat Simple_repeat 1 107 0 39 0 0 0 chr20 35558478 35558517 -31109488 + AT_rich Low_complexity Low_complexity 1 39 0 2112 104 0 0 chr20 35558517 35558836 -31109169 - AluSg SINE Alu 0 321 3 1654 164 19 16 chr20 35559006 35559317 -31108688 + AluJb SINE Alu 1 312 0 428 150 125 58 chr20 35559341 35559461 -31108544 - Tigger1 DNA MER2_type -2261 157 30 234 283 0 0 chr20 35559481 35559534 -31108471 + MIR SINE MIR 210 262 0 2142 101 7 7 chr20 35559615 35559921 -31108084 - AluSx SINE Alu -6 306 1 1646 184 0 7 chr20 35559923 35560217 -31107788 - AluJo SINE Alu -20 292 1 253 247 176 0 chr20 35560343 35560428 -31107577 + MIR SINE MIR 51 150 -58 377 341 8 0 chr20 35561004 35561136 -31106869 - MIR3 SINE MIR -24 184 52 2144 97 0 3 chr20 35562170 35562469 -31105536 - AluSp SINE Alu -14 299 2 1916 77 0 0 chr20 35562490 35562736 -31105269 - AluSg SINE Alu -9 301 56 1657 244 70 25 chr20 35562949 35563506 -31104499 - L1MD2 LINE L1 -3 6356 5775 1494 169 3 44 chr20 35564576 35564872 -31103133 + AluJo SINE Alu 23 306 -6 697 179 71 121 chr20 35565862 35565987 -31102018 - MER58A DNA MER1_type -2207 213 102 1651 193 3 0 chr20 35565987 35566288 -31101717 + AluJb SINE Alu 1 302 -10 697 179 71 121 chr20 35566288 35566386 -31101619 - MER58A DNA MER1_type -2318 102 1 866 144 0 22 chr20 35566472 35566611 -31101394 + AluJo SINE Alu 1 136 -176 515 115 0 124 chr20 35566862 35566897 -31101108 - L1MB4 LINE L1 -7 6173 6135 1609 196 0 13 chr20 35566897 35567209 -31100796 - AluJo SINE Alu -4 308 1 515 115 0 124 chr20 35567209 35567286 -31100719 - L1MB4 LINE L1 -45 6135 6075 2248 102 3 9 chr20 35567332 35567647 -31100358 - AluSp SINE Alu 0 313 1 249 33 0 0 chr20 35567733 35567763 -31100242 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 1780 135 0 28 chr20 35567766 35568054 -31099951 - AluSx SINE Alu -32 280 1 543 295 120 51 chr20 35568161 35568414 -31099591 - L1M4 LINE L1 -1262 4884 4650 1989 117 0 26 chr20 35568414 35568721 -31099284 - AluSx SINE Alu -13 299 1 543 295 120 51 chr20 35568721 35568946 -31099059 - L1M4 LINE L1 -1496 4650 4364 2319 90 0 0 chr20 35568994 35569295 -31098710 + AluY SINE Alu 1 301 -10 2630 23 0 7 chr20 35569384 35569692 -31098313 - AluY SINE Alu -5 306 1 356 187 70 87 chr20 35569725 35569851 -31098154 + MIR3 SINE MIR 66 201 -7 188 361 12 0 chr20 35570283 35570366 -31097639 + MIR SINE MIR 16 99 -163 691 220 44 22 chr20 35570479 35570661 -31097344 - MIR SINE MIR -29 233 48 525 173 87 0 chr20 35570663 35570767 -31097238 + MER3 DNA MER1_type 97 209 0 501 125 147 96 chr20 35571281 35571310 -31096695 - L1MB1 LINE L1 -1 6167 6141 2396 78 0 0 chr20 35571310 35571617 -31096388 + AluSq SINE Alu 1 307 -6 501 125 147 96 chr20 35571617 35571723 -31096282 - L1MB1 LINE L1 -27 6141 6025 691 124 19 0 chr20 35571724 35571829 -31096176 - U6 snRNA snRNA 0 107 1 272 224 41 31 chr20 35572560 35572658 -31095347 - MIR SINE MIR -66 142 44 291 278 69 56 chr20 35573416 35573560 -31094445 - L2 LINE L2 -52 3261 3116 1100 142 18 53 chr20 35573623 35573848 -31094157 + AluJb SINE Alu 89 305 -7 361 259 151 44 chr20 35573857 35574146 -31093859 - L2 LINE L2 -305 3008 2693 373 342 18 0 chr20 35574170 35574281 -31093724 + L2 LINE L2 3160 3272 0 347 229 8 59 chr20 35574768 35574824 -31093181 - L1ME1 LINE L1 -5 6161 6113 2234 82 7 0 chr20 35574824 35575116 -31092889 + AluSp SINE Alu 1 294 -19 347 229 8 59 chr20 35575116 35575177 -31092828 - L1ME1 LINE L1 -53 6113 6050 2042 128 0 3 chr20 35575224 35575522 -31092483 - AluSx SINE Alu -15 297 1 2145 156 27 32 chr20 35575532 35575582 -31092423 - L1MB2 LINE L1 -2 6169 6120 2380 80 0 0 chr20 35575582 35575884 -31092121 - AluSx SINE Alu -10 302 1 2145 156 27 32 chr20 35575884 35576243 -31091762 - L1MB2 LINE L1 -51 6120 5762 726 157 0 25 chr20 35576255 35576376 -31091629 - FAM SINE Alu -8 41 1 2060 118 0 13 chr20 35576385 35576553 -31091452 - AluSx SINE Alu -11 301 137 2276 77 0 3 chr20 35576553 35576850 -31091155 - AluY SINE Alu -15 296 1 2060 118 0 13 chr20 35576850 35576986 -31091019 - AluSx SINE Alu -175 137 1 307 290 24 92 chr20 35577444 35577651 -31090354 - MLT1J2 LTR MaLR 0 450 258 589 177 142 0 chr20 35578184 35578297 -31089708 - FLAM_C SINE Alu -3 130 2 346 106 0 0 chr20 35578373 35578420 -31089585 - FLAM_A SINE Alu -73 60 14 1849 159 0 3 chr20 35578518 35578820 -31089185 - AluSx SINE Alu -11 301 1 5135 110 62 38 chr20 35580006 35580339 -31087666 - MER4D LTR ERV1 0 903 580 2265 91 3 7 chr20 35580339 35580648 -31087357 + AluSp SINE Alu 2 309 -4 5135 110 62 38 chr20 35580648 35581005 -31087000 - MER4D LTR ERV1 -323 580 183 2155 64 7 3 chr20 35581005 35581325 -31086680 - AluY SINE Alu 0 321 1 5135 110 62 38 chr20 35581325 35581513 -31086492 - MER4D LTR ERV1 -720 183 1 552 264 108 30 chr20 35583088 35583319 -31084686 + MIR SINE MIR 9 257 -5 363 370 42 0 chr20 35583519 35583684 -31084321 - MIR SINE MIR -56 206 35 1364 146 138 4 chr20 35585171 35585439 -31082566 + AluJo SINE Alu 1 304 -8 2373 76 0 0 chr20 35585973 35586276 -31081729 - AluY SINE Alu -8 303 1 884 149 56 19 chr20 35586352 35586513 -31081492 + AluSg/x SINE Alu 132 298 -12 761 178 151 20 chr20 35586516 35586668 -31081337 + AluJo/FRAM SINE Alu 129 300 -12 2122 99 0 0 chr20 35586763 35587072 -31080933 - AluSg SINE Alu 0 309 1 1620 141 43 7 chr20 35587710 35588014 -31079991 - AluSq SINE Alu 0 314 1 253 193 125 34 chr20 35588205 35588293 -31079712 + HERV30 LTR ERV1 4872 4967 -3290 449 356 58 23 chr20 35588372 35588546 -31079459 - L2 LINE L2 -20 3252 3073 2004 112 0 14 chr20 35589045 35589340 -31078665 + AluSq SINE Alu 7 297 -16 1510 101 142 12 chr20 35589340 35589618 -31078387 + AluSg1 SINE Alu 1 310 0 2245 79 0 0 chr20 35589797 35590161 -31077844 - AluSc SINE Alu 0 309 1 969 192 71 0 chr20 35590233 35590415 -31077590 - MER3 DNA MER1_type -14 195 1 2210 112 0 0 chr20 35592924 35593237 -31074768 + AluSq SINE Alu 1 313 0 710 106 39 0 chr20 35593550 35593654 -31074351 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 910 139 110 25 chr20 35593645 35593890 -31074115 + Tigger3(Golem) DNA MER2_type 2277 2542 -487 293 233 14 14 chr20 35593863 35593936 -31074069 + AluSp SINE Alu 122 194 -109 * 2022 116 23 0 chr20 35593954 35594255 -31073750 + AluSx SINE Alu 1 308 -4 1290 154 42 0 chr20 35594314 35594528 -31073477 + AluJb SINE Alu 73 295 -17 1491 146 45 150 chr20 35594529 35594769 -31073236 + Tigger3(Golem) DNA MER2_type 2588 2751 -277 2077 119 0 0 chr20 35594769 35595064 -31072941 - AluSg SINE Alu -15 295 1 1491 146 45 150 chr20 35595064 35595316 -31072689 + Tigger3(Golem) DNA MER2_type 2751 3028 0 2094 106 3 0 chr20 35595333 35595626 -31072379 - AluSq SINE Alu -17 296 3 871 95 8 8 chr20 35595630 35595756 -31072249 - AluSq/x SINE Alu -180 132 7 1000 163 93 73 chr20 35598291 35598604 -31069401 + MER33 DNA MER1_type 2 320 -4 203 179 51 0 chr20 35598656 35598695 -31069310 + MIR SINE MIR 156 196 -66 370 298 18 0 chr20 35598740 35598854 -31069151 + MIR SINE MIR 91 206 -56 243 0 0 0 chr20 35598917 35598944 -31069061 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 1571 91 0 5 chr20 35598954 35599174 -31068831 - AluSq SINE Alu -94 219 1 244 208 75 0 chr20 35599176 35599229 -31068776 - MIR SINE MIR -98 164 108 829 227 46 21 chr20 35599443 35599637 -31068368 + Charlie8 DNA MER1_type 67 265 -2152 278 308 129 36 chr20 35599880 35600192 -31067813 - L2 LINE L2 -184 3088 2752 281 143 16 79 chr20 35600309 35600372 -31067633 - MIR3 SINE MIR -6 202 144 1239 120 0 5 chr20 35600458 35600642 -31067363 + AluSx SINE Alu 1 183 -129 195 282 28 14 chr20 35600865 35600936 -31067069 - MIR SINE MIR -121 141 70 199 358 92 8 chr20 35600992 35601112 -31066893 + L2 LINE L2 3141 3270 -2 2108 110 0 3 chr20 35601304 35601596 -31066409 + AluSg SINE Alu 1 291 -19 3200 188 55 0 chr20 35601596 35601794 -31066211 - L1MD2 LINE L1 -11 6348 6162 189 0 0 0 chr20 35601794 35601815 -31066190 + (TG)n Simple_repeat Simple_repeat 2 22 0 3200 188 55 0 chr20 35601815 35602232 -31065773 - L1MD2 LINE L1 -197 6162 5699 191 333 0 23 chr20 35602282 35602369 -31065636 + MIR SINE MIR 151 235 -27 2456 106 14 25 chr20 35602483 35602851 -31065154 - THE1B LTR MaLR 0 364 1 415 221 58 0 chr20 35602883 35602969 -31065036 - MIR SINE MIR -123 139 49 301 296 11 0 chr20 35602985 35603073 -31064932 - L2 LINE L2 -557 2757 2669 266 254 30 0 chr20 35603358 35603425 -31064580 - MIR3 SINE MIR -51 157 89 351 194 0 4 chr20 35603437 35603498 -31064507 - L1M3 LINE L1 -627 5541 5483 1273 166 64 0 chr20 35603546 35603660 -31064345 - AluJo SINE Alu -62 250 145 201 39 0 0 chr20 35603660 35603686 -31064319 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1273 166 64 0 chr20 35603686 35603806 -31064199 - AluJo SINE Alu -167 145 1 1200 106 0 0 chr20 35603847 35604026 -31063979 + (TTCCC)n Simple_repeat Simple_repeat 2 180 0 234 91 0 0 chr20 35604026 35604059 -31063946 + (TCTCC)n Simple_repeat Simple_repeat 3 35 0 1894 110 4 4 chr20 35604111 35604384 -31063621 - AluSx SINE Alu -39 273 1 2396 63 0 7 chr20 35605411 35605713 -31062292 - AluY SINE Alu -11 300 1 286 324 52 5 chr20 35605890 35606100 -31061905 - L1M4 LINE L1 -2354 3792 3573 1663 184 13 3 chr20 35606215 35606524 -31061481 + AluJb SINE Alu 1 312 0 1707 88 13 0 chr20 35606566 35606819 -31061186 + AluSq SINE Alu 55 310 0 1624 103 4 4 chr20 35607332 35607565 -31060440 - AluSg/x SINE Alu -11 299 67 1984 99 0 18 chr20 35607565 35607848 -31060157 - AluY SINE Alu -33 278 1 732 107 0 19 chr20 35607861 35607964 -31060041 - AluSc SINE Alu -18 291 191 2092 117 0 0 chr20 35607863 35608154 -31059851 - AluSc SINE Alu -18 291 1 183 333 67 0 chr20 35608205 35608265 -31059740 + L2 LINE L2 3142 3205 -67 1935 133 17 0 chr20 35608337 35608631 -31059374 - AluSx SINE Alu -13 299 1 321 250 40 0 chr20 35608657 35608733 -31059272 - MIR3 SINE MIR -48 160 82 2180 156 43 54 chr20 35609946 35610388 -31057617 + LTR36 LTR ERV1 1 437 -174 1610 101 0 9 chr20 35610393 35610621 -31057384 - AluSg/x SINE Alu -2 310 85 310 224 15 15 chr20 35610621 35610688 -31057317 + LTR36 LTR ERV1 545 611 0 180 0 0 0 chr20 35610698 35610718 -31057287 + (A)n Simple_repeat Simple_repeat 1 20 0 1930 139 3 0 chr20 35610724 35611018 -31056987 + AluSx SINE Alu 1 295 -17 840 205 116 37 chr20 35611028 35611243 -31056762 - MER66B LTR ERV1 -3 483 252 305 77 0 0 chr20 35611242 35611281 -31056724 + U2 snRNA snRNA 1 39 -149 * 469 193 68 85 chr20 35611285 35611461 -31056544 - MER66B LTR ERV1 -217 269 97 230 284 167 0 chr20 35611541 35611643 -31056362 + MIR SINE MIR 87 205 -57 925 246 62 25 chr20 35612265 35612509 -31055496 + MIR SINE MIR 10 262 0 348 349 56 16 chr20 35612817 35613069 -31054936 - L1MC/D LINE L1 -2008 5800 5539 804 151 8 0 chr20 35613166 35613292 -31054713 + AluJb SINE Alu 5 131 -181 363 261 33 49 chr20 35613342 35613526 -31054479 - L1MC/D LINE L1 -797 5349 5169 2001 136 0 3 chr20 35613538 35613846 -31054159 - AluSx SINE Alu 0 312 6 189 0 0 0 chr20 35613851 35613872 -31054133 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1068 142 0 0 chr20 35613874 35614036 -31053969 - FRAM SINE Alu -17 159 1 2672 23 0 0 chr20 35614090 35614400 -31053605 - AluYa5 SINE Alu -1 310 1 557 280 63 51 chr20 35614452 35614598 -31053407 - L1MC4 LINE L1 -198 7844 7701 2038 96 0 0 chr20 35614598 35614869 -31053136 - AluSx SINE Alu -41 271 1 557 280 63 51 chr20 35614869 35615054 -31052951 - L1MC4 LINE L1 -341 7701 7509 1090 200 131 11 chr20 35615136 35615411 -31052594 - MLT1D LTR MaLR 0 505 198 525 203 110 0 chr20 35615500 35615618 -31052387 + MER63D DNA MER1_type 4 760 -76 195 125 188 21 chr20 35615677 35615725 -31052280 - L3 LINE CR1 -755 822 767 190 333 32 32 chr20 35616227 35616320 -31051685 + L2 LINE L2 1162 1254 -2060 183 265 0 20 chr20 35616323 35616372 -31051633 - L3 LINE CR1 -951 626 579 2372 61 3 0 chr20 35616566 35616862 -31051143 - AluY SINE Alu -14 297 1 238 217 0 0 chr20 35617344 35617390 -31050615 - Charlie8 DNA MER1_type -2346 71 26 417 264 97 28 chr20 35617915 35618118 -31049887 + MIR SINE MIR 27 256 -6 2740 13 0 0 chr20 35618121 35618454 -31049551 - AluY SINE Alu 0 333 1 2560 30 0 0 chr20 35618456 35618753 -31049252 - AluY SINE Alu -14 297 1 382 224 245 7 chr20 35619204 35619347 -31048658 + MIR3 SINE MIR 10 186 -22 819 150 0 0 chr20 35619632 35619752 -31048253 + FRAM SINE Alu 36 155 -21 21 57 0 0 chr20 35619873 35619908 -31048097 + AT_rich Low_complexity Low_complexity 1 35 0 362 200 0 0 chr20 35620452 35620512 -31047493 - FRAM/FAM SINE Alu -106 60 1 1480 184 3 31 chr20 35620541 35620829 -31047176 + AluJb SINE Alu 1 280 -32 870 129 32 0 chr20 35620872 35621027 -31046978 + L1MB8 LINE L1 6007 6166 -12 1671 160 0 57 chr20 35621328 35621498 -31046507 - AluJb SINE Alu -11 301 156 2274 80 0 0 chr20 35621498 35621797 -31046208 - AluY SINE Alu -12 299 1 1671 160 0 57 chr20 35621797 35621944 -31046061 - AluJb SINE Alu -156 156 2 190 250 62 12 chr20 35622239 35622319 -31045686 - L2 LINE L2 -410 2903 2820 548 191 25 94 chr20 35622491 35622585 -31045420 - MSTC LTR MaLR -238 158 80 891 144 0 0 chr20 35622585 35622710 -31045295 - FLAM_C SINE Alu -7 126 2 548 191 25 94 chr20 35622710 35622785 -31045220 - MSTC LTR MaLR -316 80 1 515 327 58 23 chr20 35622786 35623046 -31044959 - L2 LINE L2 -217 3096 2828 407 232 143 0 chr20 35623378 35623490 -31044515 + MIR SINE MIR 116 243 -19 504 292 0 26 chr20 35623970 35624124 -31043881 - MIR3 SINE MIR -1 207 58 252 336 70 7 chr20 35624319 35624462 -31043543 + MIR3 SINE MIR 43 194 -14 1545 195 3 13 chr20 35624580 35624893 -31043112 - AluJb SINE Alu -2 310 1 320 245 129 14 chr20 35625073 35625212 -31042793 - L2 LINE L2 -183 3089 2935 202 149 0 43 chr20 35625289 35625336 -31042669 + (GGA)n Simple_repeat Simple_repeat 1 45 0 322 290 130 30 chr20 35625600 35625800 -31042205 + L2 LINE L2 2893 3112 -160 1045 200 51 0 chr20 35625881 35626076 -31041929 - AluJb SINE Alu -17 295 91 493 154 0 0 chr20 35626076 35626154 -31041851 + AluJo SINE Alu 70 147 -165 193 161 0 0 chr20 35626158 35626189 -31041816 + L2 LINE L2 3008 3038 -275 828 128 8 0 chr20 35626220 35626337 -31041668 + AluJo/FLAM SINE Alu 1 118 -184 593 107 0 12 chr20 35626337 35626421 -31041584 - AluJb SINE Alu -228 84 2 423 298 53 8 chr20 35626663 35626794 -31041211 - MIR SINE MIR -113 149 13 266 293 172 9 chr20 35626836 35626952 -31041053 - L2 LINE L2 0 3313 3179 282 191 9 130 chr20 35628025 35628140 -31039865 + L2 LINE L2 2943 3043 -229 1707 152 3 25 chr20 35628164 35628447 -31039558 + AluJo SINE Alu 1 277 -35 972 192 12 0 chr20 35628447 35628619 -31039386 - AluJo SINE Alu -138 174 1 2035 127 0 7 chr20 35628641 35628941 -31039064 - AluSx SINE Alu -14 298 1 320 362 17 40 chr20 35628945 35629119 -31038886 + L2 LINE L2 3103 3272 0 597 333 27 0 chr20 35629517 35629703 -31038302 + MIR SINE MIR 51 241 -21 2002 105 0 7 chr20 35631009 35631323 -31036682 - AluSq SINE Alu 0 312 1 1847 144 0 27 chr20 35631325 35631624 -31036381 - AluSx SINE Alu -21 291 1 550 150 0 45 chr20 35631761 35631867 -31036138 - MER31A LTR ERV1 -37 444 340 364 371 77 15 chr20 35631867 35632139 -31035866 - L1MC/D LINE L1 -2213 5595 5307 865 223 57 14 chr20 35632160 35632371 -31035634 - MIR SINE MIR -12 250 31 256 340 42 91 chr20 35632440 35632705 -31035300 - L2 LINE L2 -13 3259 3008 642 185 85 0 chr20 35632743 35632873 -31035132 - MER63D DNA MER1_type -2 1059 919 690 234 0 0 chr20 35632879 35633007 -31034998 + FLAM_A SINE Alu 1 128 -5 267 31 0 0 chr20 35633012 35633044 -31034961 + (GA)n Simple_repeat Simple_repeat 1 32 0 259 133 17 17 chr20 35633065 35633125 -31034880 + GA-rich Low_complexity Low_complexity 1 60 0 2049 199 90 107 chr20 35633127 35633504 -31034501 - MER63D DNA MER1_type -139 922 540 2083 124 10 0 chr20 35633504 35633811 -31034194 + AluSx SINE Alu 3 312 0 2049 199 90 107 chr20 35633811 35633822 -31034183 - MER63D DNA MER1_type -521 540 530 2032 112 34 10 chr20 35633822 35634118 -31033887 + AluSx SINE Alu 1 303 -9 2049 199 90 107 chr20 35634118 35634530 -31033475 - MER63D DNA MER1_type -531 530 4 247 242 121 22 chr20 35634846 35634937 -31033068 + MIR SINE MIR 103 202 -60 909 179 5 65 chr20 35634966 35635024 -31032981 + MER5A DNA MER1_type 1 61 -128 2349 91 0 0 chr20 35635024 35635333 -31032672 - AluSq SINE Alu -3 310 2 909 179 5 65 chr20 35635333 35635475 -31032530 + MER5A DNA MER1_type 61 189 0 398 250 128 18 chr20 35635537 35635701 -31032304 - MER5A DNA MER1_type -1 188 7 385 238 127 16 chr20 35635746 35635872 -31032133 + Charlie8 DNA MER1_type 37 176 -2241 1244 237 4 0 chr20 35636321 35636599 -31031406 - L1ME3 LINE L1 -24 6138 5860 338 290 67 27 chr20 35636612 35636912 -31031093 + L1ME4a LINE L1 5771 6082 -39 272 213 0 0 chr20 35636908 35636969 -31031036 - L1MC4 LINE L1 0 8042 7982 * 320 119 0 0 chr20 35636970 35637012 -31030993 - AluSp SINE Alu -130 173 132 1897 101 0 86 chr20 35637021 35637200 -31030805 - AluSp SINE Alu -6 307 114 211 28 56 0 chr20 35637200 35637236 -31030769 + (TTTTG)n Simple_repeat Simple_repeat 3 40 0 2108 81 4 0 chr20 35637236 35637507 -31030498 - AluSp SINE Alu -30 283 12 1897 101 0 86 chr20 35637507 35637662 -31030343 - AluSp SINE Alu -197 116 1 204 40 0 0 chr20 35637729 35637754 -31030251 + (A)n Simple_repeat Simple_repeat 1 25 0 2274 100 0 0 chr20 35637760 35638060 -31029945 + AluSx SINE Alu 1 300 -12 24 0 0 0 chr20 35638589 35638613 -31029392 + AT_rich Low_complexity Low_complexity 1 24 0 2031 136 8 20 chr20 35638618 35638971 -31029034 - L1MB7 LINE L1 -222 5962 5614 1297 134 16 0 chr20 35638971 35639165 -31028840 - MSTC LTR MaLR 0 428 232 300 298 228 9 chr20 35639352 35639466 -31028539 + L2 LINE L2 3134 3272 0 390 317 96 43 chr20 35639563 35639656 -31028349 - MIR SINE MIR 0 262 175 2161 118 0 0 chr20 35639656 35639961 -31028044 - AluSx SINE Alu -7 305 1 390 317 96 43 chr20 35639961 35640097 -31027908 - MIR SINE MIR -87 175 21 265 266 123 8 chr20 35640504 35640628 -31027377 + MIR SINE MIR 2 138 -70 721 291 40 20 chr20 35640635 35640886 -31027119 + MIR SINE MIR 7 262 0 3184 217 59 39 chr20 35641015 35641183 -31026822 - L1MEc LINE L1 -838 1738 1575 2258 100 3 0 chr20 35641183 35641494 -31026511 - AluSx SINE Alu 0 312 1 3184 217 59 39 chr20 35641494 35641745 -31026260 - L1MEc LINE L1 -1001 1575 1330 2238 91 0 13 chr20 35641745 35642054 -31025951 + AluSx SINE Alu 6 310 -2 3184 217 59 39 chr20 35642054 35642830 -31025175 - L1MEc LINE L1 -1246 1330 1880 2259 96 0 3 chr20 35642830 35643132 -31024873 - AluSq SINE Alu -12 301 1 3184 217 59 39 chr20 35643132 35643491 -31024514 - L1MEc LINE L1 -695 1881 1531 1056 158 0 6 chr20 35643521 35643708 -31024297 - AluSc SINE Alu 0 306 121 1804 110 3 125 chr20 35643725 35643907 -31024098 - AluSq SINE Alu -15 288 161 7085 47 11 29 chr20 35643907 35645473 -31022532 - SVA Other Other -799 1383 1 1804 110 3 125 chr20 35645473 35645617 -31022388 - AluSq SINE Alu -142 161 1 2737 230 63 49 chr20 35645664 35646686 -31021319 - L1MEc LINE L1 -4906 1490 455 763 189 8 0 chr20 35646687 35646814 -31021191 - MLT1F LTR MaLR -16 551 424 643 158 0 0 chr20 35646815 35646916 -31021089 + FLAM_A SINE Alu 30 130 -12 951 247 169 31 chr20 35646916 35647272 -31020733 - MLT1F LTR MaLR -136 406 2 1697 225 25 55 chr20 35647273 35647598 -31020407 - L1MEc LINE L1 -5936 460 150 1833 127 18 3 chr20 35647598 35647881 -31020124 - AluJo SINE Alu -17 295 9 1697 225 25 55 chr20 35647881 35647991 -31020014 - L1MEc LINE L1 -6246 150 38 2178 142 24 6 chr20 35648198 35648529 -31019476 - MER1B DNA MER1_type 0 337 1 2164 85 0 3 chr20 35648695 35649015 -31018990 + AluY SINE Alu 1 319 0 2271 92 0 3 chr20 35649051 35649354 -31018651 - AluSg SINE Alu -8 302 1 365 246 6 54 chr20 35649363 35649380 -31018625 - L1MA10 LINE L1 -1 6333 6317 999 197 101 82 chr20 35649380 35649453 -31018552 - L1ME2 LINE L1 -10 6154 6084 1826 151 3 7 chr20 35649453 35649744 -31018261 - AluJb SINE Alu -22 290 1 999 197 101 82 chr20 35649744 35649934 -31018071 - L1ME2 LINE L1 -80 6084 5879 2093 99 3 0 chr20 35649934 35650246 -31017759 + AluY SINE Alu 1 313 0 999 197 101 82 chr20 35650246 35650335 -31017670 - L1ME2 LINE L1 -285 5879 5793 732 185 7 22 chr20 35650339 35650474 -31017531 - FLAM_A SINE Alu 0 133 1 276 309 10 31 chr20 35650489 35650559 -31017446 - MIR SINE MIR -5 257 188 1371 228 14 0 chr20 35650559 35650848 -31017157 - AluJb SINE Alu -19 293 1 276 309 10 31 chr20 35650848 35650874 -31017131 - MIR SINE MIR -74 188 163 187 264 75 0 chr20 35651009 35651062 -31016943 + MIR SINE MIR 41 97 -111 326 242 195 20 chr20 35651659 35651808 -31016197 + MIR3 SINE MIR 30 204 -4 353 220 202 69 chr20 35651867 35652040 -31015965 + MIR SINE MIR 2 197 -65 886 178 0 26 chr20 35652075 35652227 -31015778 + AluJb SINE Alu 135 282 -30 2322 74 0 3 chr20 35652231 35652528 -31015477 - AluY SINE Alu -15 296 1 429 174 54 0 chr20 35652629 35652721 -31015284 + MLT1A1 LTR MaLR 269 365 0 337 334 57 47 chr20 35652722 35653113 -31014892 + L2 LINE L2 2727 3114 -158 211 244 0 0 chr20 35653146 35653191 -31014814 + (TAA)n Simple_repeat Simple_repeat 3 47 0 276 338 103 14 chr20 35653191 35653336 -31014669 - L2 LINE L2 -10 3303 3146 293 188 159 0 chr20 35653351 35653420 -31014585 + MER116 DNA Mariner 1 80 0 180 337 69 30 chr20 35653501 35653602 -31014403 - L2 LINE L2 -253 3060 2956 214 378 67 38 chr20 35653775 35654013 -31013992 + L2 LINE L2 2810 3054 -218 378 59 0 0 chr20 35654164 35654215 -31013790 - L1M LINE L1 -927 5373 5323 335 215 201 9 chr20 35654645 35654787 -31013218 + MIR SINE MIR 21 184 -62 230 275 50 75 chr20 35655078 35655198 -31012807 - MIR3 SINE MIR -77 131 15 808 291 54 19 chr20 35655961 35656277 -31011728 - LTR16C LTR ERVL -10 481 155 338 253 55 11 chr20 35656406 35656497 -31011508 + L2 LINE L2 2976 3070 -202 807 244 47 19 chr20 35657435 35657648 -31010357 + MER58A DNA MER1_type 6 224 0 366 357 42 0 chr20 35657699 35657842 -31010163 + L2 LINE L2 3112 3260 -12 1019 202 81 4 chr20 35658215 35658473 -31009532 - LTR51 LTR ERV1 -14 657 380 666 154 9 0 chr20 35658573 35658683 -31009322 + AluJb SINE Alu 190 300 -12 1607 192 19 45 chr20 35660160 35660218 -31007787 + MLT1A1 LTR MaLR 1 59 -306 1699 143 4 22 chr20 35660218 35660490 -31007515 + AluSx SINE Alu 37 303 -9 1607 192 19 45 chr20 35660490 35660806 -31007199 + MLT1A1 LTR MaLR 59 365 0 2868 154 8 10 chr20 35661321 35661826 -31006179 - Tigger4(Zombi) DNA MER2_type -10 2721 2218 578 156 0 0 chr20 35661821 35661911 -31006094 - Tigger4(Zombi) DNA MER2_type -2640 91 2 * 768 177 15 0 chr20 35662075 35662205 -31005800 - FLAM_C SINE Alu -10 133 2 299 351 37 0 chr20 35662431 35662565 -31005440 + L2 LINE L2 3175 3313 0 676 94 0 0 chr20 35662580 35662676 -31005329 - AluSp/q SINE Alu -3 310 215 257 300 109 9 chr20 35663542 35663652 -31004353 + L2 LINE L2 2199 2319 -995 2048 131 24 0 chr20 35664301 35664591 -31003414 + AluSx SINE Alu 1 297 -15 705 240 34 29 chr20 35664594 35664769 -31003236 - MIR SINE MIR -43 219 44 699 93 0 0 chr20 35665122 35665219 -31002786 + AluSp/q SINE Alu 217 313 0 2038 136 30 0 chr20 35665233 35665534 -31002471 + AluSx SINE Alu 1 310 -2 216 278 86 62 chr20 35665534 35665696 -31002309 - L3 LINE CR1 -194 1383 1218 1432 83 0 0 chr20 35666149 35666318 -31001687 + AluSg SINE Alu 1 169 -141 1195 203 32 32 chr20 35666323 35666634 -31001371 + L1M4 LINE L1 4073 4383 -1763 1905 114 3 65 chr20 35666644 35666761 -31001244 + AluSq SINE Alu 25 148 -165 2210 116 0 3 chr20 35666761 35667063 -31000942 + AluSq SINE Alu 1 301 -12 1905 114 3 65 chr20 35667063 35667235 -31000770 + AluSq SINE Alu 148 296 -17 2224 77 63 0 chr20 35667302 35667588 -31000417 + AluSp SINE Alu 1 304 -9 3229 169 24 40 chr20 35667598 35667881 -31000124 + L1MC3 LINE L1 5880 6166 -1619 2381 99 0 0 chr20 35667881 35668184 -30999821 + AluY SINE Alu 1 303 -8 3229 169 24 40 chr20 35668184 35668644 -30999361 + L1MC3 LINE L1 6166 6611 -1174 1240 147 0 10 chr20 35668644 35668842 -30999163 + AluY SINE Alu 1 196 -115 513 170 36 62 chr20 35668944 35669056 -30998949 - FLAM_A SINE Alu -14 128 20 1504 161 10 26 chr20 35669057 35669361 -30998644 - L1MC4 LINE L1 -961 7081 6783 375 219 118 8 chr20 35669434 35669553 -30998452 - MIR SINE MIR -56 152 21 268 213 21 0 chr20 35670330 35670377 -30997628 - L2 LINE L2 -8 3264 3217 1685 98 133 12 chr20 35670508 35670764 -30997241 + AluSg1 SINE Alu 1 287 -22 355 257 92 44 chr20 35670815 35671021 -30996984 - L2 LINE L2 -220 3052 2837 511 288 99 38 chr20 35671740 35672291 -30995714 + MER109 Unknown Unknown 1 810 -1622 267 250 48 39 chr20 35672402 35672506 -30995499 + MER109 Unknown Unknown 548 652 -1780 2387 87 0 0 chr20 35672506 35672795 -30995210 - AluSc SINE Alu -20 289 1 369 275 152 34 chr20 35672831 35673009 -30994996 + MIR SINE MIR 46 244 -18 285 193 105 0 chr20 35673271 35673328 -30994677 - MIR SINE MIR -65 143 81 254 250 76 136 chr20 35673464 35673484 -30994521 - MIR3 SINE MIR -25 183 163 2524 72 3 0 chr20 35673484 35673788 -30994217 - AluSp SINE Alu -8 305 1 254 250 76 136 chr20 35673788 35673951 -30994054 - MIR3 SINE MIR -45 163 11 205 171 0 0 chr20 35674071 35674106 -30993899 + (CA)n Simple_repeat Simple_repeat 2 36 0 432 0 0 0 chr20 35674166 35674214 -30993791 + (CA)n Simple_repeat Simple_repeat 2 49 0 421 300 0 14 chr20 35674306 35674449 -30993556 + MIR SINE MIR 18 157 -68 381 296 11 0 chr20 35674452 35674584 -30993421 + MIR SINE MIR 4 140 -68 612 246 128 26 chr20 35674615 35674810 -30993195 - MIR SINE MIR -38 224 10 2524 93 0 3 chr20 35675055 35675368 -30992637 + AluSx SINE Alu 1 312 0 249 284 0 15 chr20 35675376 35675443 -30992562 - MIR3 SINE MIR -41 167 102 584 308 23 9 chr20 35675492 35675713 -30992292 + L2 LINE L2 2466 2689 -625 255 125 0 0 chr20 35676962 35677002 -30991003 + (TG)n Simple_repeat Simple_repeat 1 40 0 228 196 0 18 chr20 35678102 35678158 -30989847 - MLT1K LTR MaLR -28 560 506 366 208 0 62 chr20 35678336 35678432 -30989573 - MLT1K LTR MaLR -382 206 117 766 248 73 39 chr20 35678575 35678809 -30989196 - MIR SINE MIR 0 262 21 422 257 86 7 chr20 35678842 35678982 -30989023 - L3 LINE CR1 -96 1481 1331 551 212 124 133 chr20 35679062 35679145 -30988860 - MIR SINE MIR -1 261 179 2134 124 7 0 chr20 35679145 35679428 -30988577 + AluSx SINE Alu 3 287 -25 551 212 124 133 chr20 35679428 35679585 -30988420 - MIR SINE MIR -83 179 23 2233 117 7 3 chr20 35680440 35680749 -30987256 - AluSg SINE Alu 0 310 1 1976 148 0 13 chr20 35680751 35681054 -30986951 - AluJo SINE Alu -13 299 1 1907 158 0 9 chr20 35681054 35681582 -30986423 - L1M2 LINE L1 -707 5584 5061 * 3210 152 121 108 chr20 35681581 35681971 -30986034 + L1MC3 LINE L1 6716 7100 -685 229 307 45 0 chr20 35681971 35682059 -30985946 + MLT1F1 LTR MaLR 35 126 -441 3210 152 121 108 chr20 35682059 35682622 -30985383 + L1MC3 LINE L1 7100 7769 -16 2364 104 3 0 chr20 35682628 35682926 -30985079 + AluSx SINE Alu 1 299 -13 1452 197 0 0 chr20 35682964 35683198 -30984807 + AluJb SINE Alu 68 301 -11 266 290 100 46 chr20 35683635 35683894 -30984111 - L3 LINE CR1 -170 1407 1135 775 118 24 8 chr20 35684102 35684229 -30983776 - L1MC3 LINE L1 -21 7764 7636 186 306 82 0 chr20 35684243 35684292 -30983713 - L3 LINE CR1 -451 1126 1074 215 197 164 16 chr20 35684511 35684572 -30983433 + L2 LINE L2 3238 3307 -6 297 312 55 28 chr20 35684930 35685039 -30982966 + MIR3 SINE MIR 54 165 -43 983 280 94 45 chr20 35685071 35685364 -30982641 - L2 LINE L2 -2 3311 3034 2208 117 13 0 chr20 35685364 35685672 -30982333 + AluJb SINE Alu 1 312 0 983 280 94 45 chr20 35685672 35685938 -30982067 - L2 LINE L2 -279 3034 2721 407 184 40 23 chr20 35685975 35686107 -30981898 + MIR SINE MIR 9 138 -70 * 854 283 16 12 chr20 35686105 35686191 -30981814 + MIR SINE MIR 12 96 -166 2543 77 3 0 chr20 35686191 35686501 -30981504 - AluY SINE Alu 0 311 1 854 283 16 12 chr20 35686501 35686658 -30981347 + MIR SINE MIR 96 256 -6 232 325 111 0 chr20 35686697 35686814 -30981191 + MIR SINE MIR 74 203 -59 1904 119 10 0 chr20 35687258 35687551 -30980454 + L1MA4 LINE L1 5725 6020 -280 333 188 35 0 chr20 35687551 35687636 -30980369 + L1MB3 LINE L1 6087 6174 -9 272 221 29 15 chr20 35687806 35687874 -30980131 + MIR3 SINE MIR 4 72 -136 2090 123 0 52 chr20 35688122 35688308 -30979697 - AluSx SINE Alu -5 307 144 2413 103 0 3 chr20 35688308 35688618 -30979387 - AluSc SINE Alu 0 309 1 2090 123 0 52 chr20 35688618 35688755 -30979250 - AluSx SINE Alu -168 144 1 1912 135 39 0 chr20 35688757 35689038 -30978967 - AluJb SINE Alu -18 294 3 235 0 57 0 chr20 35689095 35689130 -30978875 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 2311 81 44 3 chr20 35689363 35689660 -30978345 + AluSp SINE Alu 1 309 -4 333 316 82 53 chr20 35689968 35690174 -30977831 + L1ME4a LINE L1 5477 5675 -446 2147 137 3 0 chr20 35690174 35690467 -30977538 + AluSx SINE Alu 1 294 -18 2156 138 0 0 chr20 35690467 35690765 -30977240 + AluSx SINE Alu 1 298 -14 2037 126 9 25 chr20 35690767 35691084 -30976921 + AluSq SINE Alu 1 312 -1 333 316 82 53 chr20 35691084 35691420 -30976585 + L1ME4a LINE L1 5675 6039 -82 1461 186 58 15 chr20 35691443 35691717 -30976288 - AluJo SINE Alu 0 312 27 25 0 0 0 chr20 35691720 35691745 -30976260 + AT_rich Low_complexity Low_complexity 1 25 0 313 225 28 0 chr20 35691766 35691837 -30976168 + L1ME4a LINE L1 6047 6119 -2 277 179 61 146 chr20 35691876 35692088 -30975917 - Charlie7 DNA MER1_type 0 2612 2419 1844 132 14 11 chr20 35692172 35692453 -30975552 - AluJb SINE Alu -30 282 1 611 309 97 64 chr20 35692479 35693115 -30974890 + L2 LINE L2 2607 3265 -7 243 276 103 0 chr20 35693123 35693239 -30974766 - L1ME4a LINE L1 -26 6095 5968 195 258 10 124 chr20 35693483 35693580 -30974425 + MIR3 SINE MIR 87 172 -36 2203 97 35 0 chr20 35693798 35694086 -30973919 - AluSx SINE Alu -14 298 1 278 246 16 0 chr20 35694283 35694344 -30973661 + L2 LINE L2 3206 3267 -5 183 390 0 0 chr20 35694490 35694572 -30973433 - MIR3 SINE MIR -14 194 113 675 263 96 47 chr20 35694674 35694806 -30973199 + L1MEd LINE L1 103 227 -5892 2086 128 3 0 chr20 35694806 35695095 -30972910 - AluSx SINE Alu -22 290 1 675 263 96 47 chr20 35695095 35695346 -30972659 + L1MEd LINE L1 227 505 -5614 259 242 77 11 chr20 35695385 35695476 -30972529 + MIR SINE MIR 166 262 0 882 267 24 24 chr20 35695526 35695736 -30972269 + MER63A DNA MER1_type 1 210 0 441 227 0 0 chr20 35696030 35696118 -30971887 - L1MB8 LINE L1 -189 5989 5902 775 201 6 18 chr20 35696140 35696309 -30971696 - MER33 DNA MER1_type -157 167 1 633 255 32 81 chr20 35697090 35697400 -30970605 - MER102a DNA MER1_type -15 315 21 368 339 31 0 chr20 35697845 35697972 -30970033 + MIR3 SINE MIR 30 160 -48 1912 137 10 27 chr20 35698028 35698328 -30969677 - AluJo SINE Alu -4 308 14 2522 108 27 11 chr20 35698328 35698697 -30969308 + THE1C LTR MaLR 1 375 0 1643 158 28 48 chr20 35699034 35699349 -30968656 - AluSx SINE Alu 0 309 1 1833 170 0 47 chr20 35699455 35699773 -30968232 - AluJo SINE Alu -9 303 1 2599 62 3 0 chr20 35699979 35700284 -30967721 + AluY SINE Alu 1 306 -5 312 172 0 0 chr20 35701128 35701186 -30966819 + (CA)n Simple_repeat Simple_repeat 1 58 0 325 229 43 0 chr20 35701186 35701256 -30966749 - L1MCa LINE L1 -4358 2068 1996 294 143 0 0 chr20 35701258 35701307 -30966698 + (CA)n Simple_repeat Simple_repeat 2 50 0 1817 148 69 7 chr20 35701340 35701631 -30966374 + AluJo SINE Alu 3 311 -1 255 302 145 28 chr20 35701853 35702032 -30965973 - MIR SINE MIR -16 246 47 2312 87 3 13 chr20 35702426 35702735 -30965270 + AluSg SINE Alu 5 310 0 2556 78 3 0 chr20 35703345 35703653 -30964352 + AluSp SINE Alu 1 309 -4 685 270 39 7 chr20 35703656 35703710 -30964295 + L1MC4 LINE L1 7701 7752 -290 1847 166 16 13 chr20 35703710 35704018 -30963987 - AluJb SINE Alu -3 309 1 685 270 39 7 chr20 35704018 35704248 -30963757 + L1MC4 LINE L1 7752 7994 -48 534 126 0 35 chr20 35704255 35704342 -30963663 - FLAM_A SINE Alu -17 125 42 2323 107 7 0 chr20 35704342 35704650 -30963355 - AluSq SINE Alu -3 310 1 3726 136 14 8 chr20 35704733 35705358 -30962647 - L1MB3 LINE L1 -4 6179 5551 1887 139 35 3 chr20 35705502 35705789 -30962216 + AluJb SINE Alu 1 296 -16 2522 74 0 0 chr20 35705858 35706167 -30961838 + AluY SINE Alu 1 309 -2 4850 153 49 9 chr20 35706252 35707102 -30960903 + L1MC1 LINE L1 5450 6333 0 1568 101 5 18 chr20 35707135 35707352 -30960653 + AluSq SINE Alu 91 304 -9 925 271 281 14 chr20 35707636 35708354 -30959651 - L2 LINE L2 -50 3263 2339 2143 95 7 21 chr20 35708408 35708693 -30959312 + AluSq SINE Alu 1 281 -32 243 0 0 0 chr20 35708694 35708721 -30959284 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1152 140 19 14 chr20 35708832 35708871 -30959134 - L1M3 LINE L1 -488 5683 5646 1005 208 127 5 chr20 35708871 35709083 -30958922 - MER8 DNA MER2_type 0 239 2 1152 140 19 14 chr20 35709083 35709250 -30958755 - L1M3 LINE L1 -525 5646 5476 528 155 31 93 chr20 35709243 35709256 -30958749 - FLAM_A SINE Alu -171 140 128 * 2394 113 0 0 chr20 35709256 35709567 -30958438 - AluSx SINE Alu -1 311 1 528 155 31 93 chr20 35709567 35709682 -30958323 - FLAM_A SINE Alu -183 128 20 1504 161 10 26 chr20 35709683 35709987 -30958018 - L1MC4 LINE L1 -961 7081 6783 375 219 118 8 chr20 35710060 35710179 -30957826 - MIR SINE MIR -56 152 21 268 213 21 0 chr20 35710956 35711003 -30957002 - L2 LINE L2 -8 3264 3217 1711 94 133 12 chr20 35711134 35711390 -30956615 + AluSg1 SINE Alu 1 287 -22 355 257 92 44 chr20 35711441 35711647 -30956358 - L2 LINE L2 -220 3052 2837 15022 156 66 44 chr20 35712365 35713131 -30954874 + MER109 Unknown Unknown 1 749 -1683 2353 90 0 0 chr20 35713131 35713420 -30954585 - AluSc SINE Alu -20 289 1 15022 156 66 44 chr20 35713420 35717078 -30950927 + MER109 Unknown Unknown 749 2432 0 858 269 151 38 chr20 35717354 35717771 -30950234 - L2 LINE L2 0 3313 2850 2998 214 69 6 chr20 35717791 35718487 -30949518 - L2 LINE L2 -648 2666 1927 2292 93 0 7 chr20 35718569 35718869 -30949136 - AluSg SINE Alu -12 298 1 2309 112 0 3 chr20 35718883 35719196 -30948809 - AluSx SINE Alu 0 312 1 2095 141 0 20 chr20 35719200 35719524 -30948481 - AluSx SINE Alu 0 312 1 2128 137 10 0 chr20 35720019 35720325 -30947680 - AluSg SINE Alu 0 310 2 1426 279 58 44 chr20 35720326 35720472 -30947533 + L2 LINE L2 2282 2424 -848 2512 103 14 3 chr20 35720472 35720823 -30947182 + THE1A LTR MaLR 1 355 0 1426 279 58 44 chr20 35720823 35720930 -30947075 + L2 LINE L2 2424 2528 -744 963 204 24 33 chr20 35720930 35721141 -30946864 - MER3 DNA MER1_type 0 209 1 1426 279 58 44 chr20 35721141 35721419 -30946586 + L2 LINE L2 2528 2833 -439 1650 152 50 36 chr20 35721419 35721472 -30946533 - AluJb SINE Alu -5 307 256 198 0 0 0 chr20 35721472 35721494 -30946511 + (CAGTG)n Simple_repeat Simple_repeat 1 22 0 1650 152 50 36 chr20 35721494 35721743 -30946262 - AluJb SINE Alu -56 256 1 1426 279 58 44 chr20 35721743 35721974 -30946031 + L2 LINE L2 2833 3059 -213 221 221 15 73 chr20 35722059 35722127 -30945878 - MIR SINE MIR 0 262 199 2179 131 0 0 chr20 35722137 35722435 -30945570 - AluSx SINE Alu -14 298 1 23 0 0 0 chr20 35722444 35722467 -30945538 + AT_rich Low_complexity Low_complexity 1 23 0 1626 155 3 59 chr20 35722467 35722770 -30945235 - AluJo SINE Alu -26 286 1 302 230 92 35 chr20 35722792 35722879 -30945126 + L2 LINE L2 3222 3313 0 * 645 239 8 0 chr20 35722877 35723011 -30944994 - MIR SINE MIR -13 249 115 1896 138 3 34 chr20 35723287 35723423 -30944582 + AluSx SINE Alu 1 140 -163 2217 113 10 10 chr20 35723423 35723734 -30944271 + AluSx SINE Alu 1 311 -1 1896 138 3 34 chr20 35723734 35723909 -30944096 + AluSx SINE Alu 140 303 0 662 95 0 0 chr20 35723910 35723994 -30944011 + AluS SINE Alu 2 85 -227 2593 65 0 0 chr20 35724164 35724471 -30943534 - AluY SINE Alu -4 307 1 870 176 0 0 chr20 35724590 35724738 -30943267 - MLT1A1 LTR MaLR 0 365 218 1673 91 0 0 chr20 35724744 35724952 -30943053 - AluSg/x SINE Alu 0 312 105 2433 96 3 0 chr20 35724962 35725274 -30942731 - AluSq SINE Alu 0 313 1 882 128 19 39 chr20 35725275 35725431 -30942574 - MLT1A1 LTR MaLR -212 153 1 2103 161 180 127 chr20 35725673 35725712 -30942293 + L1MC3 LINE L1 6881 6917 -868 2358 94 3 0 chr20 35725712 35726009 -30941996 + AluSx SINE Alu 3 300 -12 2103 161 180 127 chr20 35726009 35726138 -30941867 + L1MC3 LINE L1 6917 7038 -747 2226 85 7 3 chr20 35726138 35726461 -30941544 + AluSp SINE Alu 1 324 0 2103 161 180 127 chr20 35726461 35726520 -30941485 + L1MC3 LINE L1 7038 7092 -693 388 171 49 0 chr20 35726520 35726602 -30941403 + MLT1F1 LTR MaLR 45 130 -437 2103 161 180 127 chr20 35726602 35727092 -30940913 + L1MC3 LINE L1 7092 7724 -61 1079 206 113 28 chr20 35727135 35727426 -30940579 + MLT2D LTR ERVL 92 407 -7 248 124 0 124 chr20 35727429 35727518 -30940487 + L1MC3 LINE L1 7707 7784 -1 2387 108 0 13 chr20 35727525 35727841 -30940164 + AluSx SINE Alu 1 312 0 1764 230 71 21 chr20 35727875 35728354 -30939651 - MLT1D LTR MaLR -2 503 1 3021 150 25 4 chr20 35728492 35728964 -30939041 + MER66B LTR ERV1 1 482 -4 245 312 149 13 chr20 35728994 35729148 -30938857 + MIR SINE MIR 11 185 -77 196 339 74 0 chr20 35729239 35729357 -30938648 - MIR SINE MIR -55 153 77 2262 116 3 3 chr20 35729454 35729756 -30938249 - AluSq SINE Alu -11 302 1 226 220 0 0 chr20 35729773 35729823 -30938182 + Charlie8 DNA MER1_type 1368 1417 -1000 617 291 44 5 chr20 35730209 35730412 -30937593 + MIR SINE MIR 32 242 -20 546 79 0 0 chr20 35731172 35731248 -30936757 + (GCTG)n Simple_repeat Simple_repeat 1 76 0 2150 131 0 31 chr20 35732216 35732537 -30935468 - AluSx SINE Alu -1 311 1 324 0 0 0 chr20 35732565 35732601 -30935404 + (TG)n Simple_repeat Simple_repeat 1 36 0 392 102 68 0 chr20 35733026 35733085 -30934920 - L2 LINE L2 0 3313 3251 820 162 9 134 chr20 35733234 35733309 -30934696 + MER5A DNA MER1_type 1 84 -105 1927 73 0 4 chr20 35733309 35733543 -30934462 + AluY SINE Alu 66 298 -13 820 162 9 134 chr20 35733543 35733683 -30934322 + MER5A DNA MER1_type 84 189 0 491 351 17 0 chr20 35733687 35733861 -30934144 + MIR SINE MIR 13 189 -73 2386 93 10 3 chr20 35733926 35734237 -30933768 - AluSq SINE Alu 0 313 1 2106 125 11 0 chr20 35734311 35734613 -30933392 - AluSx SINE Alu 0 305 1 261 0 0 0 chr20 35734630 35734659 -30933346 + (A)n Simple_repeat Simple_repeat 1 29 0 2263 108 0 3 chr20 35734672 35734969 -30933036 - AluSp SINE Alu -17 296 1 329 306 50 16 chr20 35735353 35735474 -30932531 - MIR3 SINE MIR -2 206 82 1622 159 9 0 chr20 35735589 35735822 -30932183 + AluSx SINE Alu 1 235 -77 330 361 98 37 chr20 35735885 35736129 -30931876 + L2 LINE L2 2829 3087 -185 2223 113 0 20 chr20 35736148 35736450 -30931555 + AluSx SINE Alu 1 296 -16 2412 83 0 0 chr20 35737300 35737590 -30930415 + AluSq SINE Alu 1 290 -23 487 309 23 11 chr20 35737619 35737794 -30930211 + MIR3 SINE MIR 30 206 -2 231 323 18 29 chr20 35738065 35738204 -30929801 + GA-rich Low_complexity Low_complexity 1 140 -360 2139 140 7 0 chr20 35738204 35738511 -30929494 + AluJb SINE Alu 1 309 -3 231 323 18 29 chr20 35738511 35738571 -30929434 + GA-rich Low_complexity Low_complexity 140 500 0 251 281 98 0 chr20 35738865 35738947 -30929058 + L2 LINE L2 3174 3263 -9 2062 138 3 0 chr20 35738959 35739256 -30928749 + AluSx SINE Alu 1 298 -14 1086 118 7 0 chr20 35739693 35739837 -30928168 + AluJo SINE Alu 1 145 -167 2260 123 7 0 chr20 35739837 35740145 -30927860 + AluSp SINE Alu 1 310 -3 185 300 0 33 chr20 35740488 35740548 -30927457 + MIR SINE MIR 91 148 -60 2409 88 0 0 chr20 35740703 35740998 -30927007 - AluSg SINE Alu -15 295 1 531 354 39 24 chr20 35741087 35741341 -30926664 + MIR SINE MIR 5 262 0 288 283 43 0 chr20 35741354 35741446 -30926559 - MIR3 SINE MIR -5 203 108 237 298 135 10 chr20 35741432 35741536 -30926469 - L3b LINE CR1 -193 1390 1274 * 24 53 0 0 chr20 35741849 35741887 -30926118 + AT_rich Low_complexity Low_complexity 1 38 0 803 135 0 0 chr20 35741900 35742011 -30925994 - FLAM_C SINE Alu -32 111 1 254 94 38 0 chr20 35742066 35742119 -30925886 - L1MB4 LINE L1 0 6180 6126 216 184 0 0 chr20 35742142 35742191 -30925814 + CT-rich Low_complexity Low_complexity 3 51 0 213 149 0 43 chr20 35742760 35742807 -30925198 + (GGGGA)n Simple_repeat Simple_repeat 3 47 0 2580 66 0 0 chr20 35742886 35743189 -30924816 - AluY SINE Alu -7 304 2 2311 80 3 0 chr20 35743203 35743489 -30924516 - AluSx SINE Alu -20 292 6 1450 117 4 17 chr20 35743493 35743733 -30924272 - L1MB4 LINE L1 -38 6142 5906 940 164 141 11 chr20 35743735 35743912 -30924093 - AluJb SINE Alu -3 309 110 2805 88 20 2 chr20 35743923 35744321 -30923684 - LTR1 LTR ERV1 -25 760 356 1551 94 0 15 chr20 35744340 35744541 -30923464 + AluSg/x SINE Alu 94 291 -21 2931 143 63 74 chr20 35744541 35744705 -30923300 + L1MB7 LINE L1 5497 5661 -523 2145 107 0 0 chr20 35744705 35745029 -30922976 + AluSx SINE Alu 1 324 0 2536 87 3 0 chr20 35745034 35745344 -30922661 + AluSp SINE Alu 1 311 -2 2931 143 63 74 chr20 35745344 35745365 -30922640 + L1MB7 LINE L1 5665 5685 -499 2116 96 17 46 chr20 35745365 35745667 -30922338 + AluSx SINE Alu 9 301 -11 2931 143 63 74 chr20 35745667 35746003 -30922002 + L1MB7 LINE L1 5685 6020 -164 5336 81 3 25 chr20 35746003 35746558 -30921447 - LTR8 LTR ERV1 0 691 154 2309 114 0 0 chr20 35746558 35746857 -30921148 + AluSx SINE Alu 3 301 -11 5336 81 3 25 chr20 35746857 35747008 -30920997 - LTR8 LTR ERV1 -537 154 1 2931 143 63 74 chr20 35747008 35747156 -30920849 + L1MB7 LINE L1 6020 6168 -16 1782 170 106 0 chr20 35747322 35747652 -30920353 - MLT1A1 LTR MaLR 0 365 1 592 270 77 28 chr20 35747706 35747812 -30920193 - L1ME3A LINE L1 -214 5956 5857 2217 107 3 3 chr20 35747812 35748111 -30919894 - AluSx SINE Alu -11 301 3 592 270 77 28 chr20 35748111 35748367 -30919638 - L1ME3A LINE L1 -313 5857 5576 400 211 119 28 chr20 35748371 35748635 -30919370 - L1ME3A LINE L1 -757 5389 5121 2008 175 105 24 chr20 35748642 35748915 -30919090 + MLT2B1 LTR ERVL 1 327 -193 2057 128 7 7 chr20 35748915 35749205 -30918800 - AluSx SINE Alu -22 290 1 2008 175 105 24 chr20 35749205 35749385 -30918620 + MLT2B1 LTR ERVL 327 491 -29 3427 83 38 21 chr20 35749385 35749843 -30918162 + MER41A LTR ERV1 1 486 -149 2148 80 15 0 chr20 35749843 35750105 -30917900 + AluSx SINE Alu 3 268 -44 3427 83 38 21 chr20 35750105 35750258 -30917747 + MER41A LTR ERV1 486 635 0 284 349 21 0 chr20 35750301 35750493 -30917512 - L1ME3A LINE L1 -1042 5104 4909 1958 159 82 34 chr20 35750507 35750948 -30917057 - MLT1C LTR MaLR 0 467 6 266 277 48 12 chr20 35751065 35751148 -30916857 - MIR SINE MIR -49 213 128 847 278 44 50 chr20 35751151 35751547 -30916458 - MLT1I LTR MaLR 0 409 44 346 232 61 0 chr20 35751601 35751683 -30916322 - MIR SINE MIR -147 115 29 236 260 0 0 chr20 35752337 35752387 -30915618 + MIR SINE MIR 102 151 -111 2336 109 0 0 chr20 35752445 35752747 -30915258 + AluSx SINE Alu 2 303 -9 192 189 27 0 chr20 35752884 35752921 -30915084 + MIR SINE MIR 222 259 -3 405 285 67 106 chr20 35753375 35753554 -30914451 - MIR3 SINE MIR -11 197 26 2208 79 7 7 chr20 35753616 35753932 -30914073 - AluSg SINE Alu 0 316 1 224 311 52 22 chr20 35753941 35754076 -30913929 + L2 LINE L2 2596 2734 -580 638 256 77 0 chr20 35754113 35754281 -30913724 - L3 LINE CR1 -69 1508 1328 2248 113 3 10 chr20 35754298 35754607 -30913398 - AluSx SINE Alu -5 307 1 2097 110 41 0 chr20 35754609 35754900 -30913105 - AluSq SINE Alu -10 303 1 937 269 56 151 chr20 35755092 35755328 -30912677 - L3 LINE CR1 -280 1297 1040 2261 94 0 19 chr20 35755328 35755496 -30912509 - AluSq SINE Alu -12 301 140 2181 109 0 45 chr20 35755496 35755809 -30912196 - AluSg SINE Alu -11 299 1 2261 94 0 19 chr20 35755809 35755947 -30912058 - AluSq SINE Alu -173 140 1 937 269 56 151 chr20 35755947 35756220 -30911785 - L3 LINE CR1 -537 1040 883 1026 189 40 10 chr20 35756220 35756421 -30911584 - MER3 DNA MER1_type -2 207 1 937 269 56 151 chr20 35756421 35756681 -30911324 - L3 LINE CR1 -694 883 600 2307 119 0 0 chr20 35756901 35757203 -30910802 + AluSx SINE Alu 1 302 -10 612 248 155 15 chr20 35757203 35757409 -30910596 + MIR SINE MIR 27 261 -1 184 80 0 0 chr20 35757683 35757708 -30910297 + MIR SINE MIR 126 150 -112 233 281 44 9 chr20 35758718 35758832 -30909173 + (CGGGG)n Simple_repeat Simple_repeat 5 122 0 189 252 15 8 chr20 35759200 35759331 -30908674 + (TG)n Simple_repeat Simple_repeat 2 133 0 231 296 0 35 chr20 35759433 35759548 -30908457 + (CGTG)n Simple_repeat Simple_repeat 3 113 0 342 195 0 0 chr20 35759791 35759868 -30908137 + (TG)n Simple_repeat Simple_repeat 1 77 0 1936 121 0 29 chr20 35760946 35761089 -30906916 - AluSx SINE Alu -40 272 139 2445 99 0 0 chr20 35761089 35761392 -30906613 - AluSq SINE Alu -10 303 1 1936 121 0 29 chr20 35761392 35761528 -30906477 - AluSx SINE Alu -173 139 1 625 203 25 74 chr20 35761833 35761882 -30906123 + MER5A DNA MER1_type 28 78 -111 2152 87 63 0 chr20 35761882 35762168 -30905837 + AluSx SINE Alu 1 304 -8 625 203 25 74 chr20 35762168 35762281 -30905724 + MER5A DNA MER1_type 78 182 -7 745 311 95 42 chr20 35762588 35762967 -30905038 + L2 LINE L2 2874 3272 0 196 300 14 29 chr20 35762965 35763035 -30904970 + MIR3 SINE MIR 132 200 -8 * 233 296 49 12 chr20 35763286 35763367 -30904638 + MIR3 SINE MIR 78 161 -47 631 295 121 5 chr20 35763377 35763601 -30904404 + MIR SINE MIR 12 261 -1 1851 185 96 14 chr20 35764431 35764858 -30903147 - MLT1C LTR MaLR 0 467 6 490 99 28 0 chr20 35764960 35765031 -30902974 + AluSx SINE Alu 2 74 -239 1899 82 0 9 chr20 35765059 35765315 -30902690 + AluSx SINE Alu 55 308 0 267 250 59 83 chr20 35765429 35765589 -30902416 + MIR SINE MIR 60 213 -49 21 0 0 0 chr20 35765605 35765626 -30902379 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr20 35765674 35765694 -30902311 + (CAGCC)n Simple_repeat Simple_repeat 2 21 0 350 298 35 41 chr20 35765761 35765932 -30902073 - MIR3 SINE MIR -19 189 20 218 266 0 38 chr20 35766383 35766462 -30901543 + CT-rich Low_complexity Low_complexity 5 80 0 680 205 131 52 chr20 35766607 35766836 -30901169 - MIR SINE MIR -11 251 5 183 80 0 0 chr20 35767824 35767849 -30900156 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 2156 93 15 0 chr20 35767859 35768170 -30899835 + AluSx SINE Alu 13 327 0 189 275 12 38 chr20 35768519 35768599 -30899406 - MIR SINE MIR -115 93 16 373 186 70 0 chr20 35768632 35768718 -30899287 + MIR3 SINE MIR 110 201 -7 316 324 40 91 chr20 35769025 35769430 -30898575 + L2 LINE L2 2881 3264 -8 428 301 56 56 chr20 35769570 35769786 -30898219 + MIR SINE MIR 47 262 0 2580 58 7 7 chr20 35769812 35770122 -30897883 - AluY SINE Alu 0 311 2 284 158 0 35 chr20 35771628 35771685 -30896320 - L2 LINE L2 -1 3312 3258 238 272 44 0 chr20 35772553 35772655 -30895350 + MIR SINE MIR 79 151 -57 477 200 0 11 chr20 35772871 35772961 -30895044 + Charlie5 DNA MER1_type 1 89 -2523 1447 143 102 8 chr20 35772962 35773207 -30894798 - AluSx SINE Alu -44 268 1 211 149 64 0 chr20 35773212 35773259 -30894746 + (TTTAA)n Simple_repeat Simple_repeat 1 50 0 1049 180 60 90 chr20 35773271 35773332 -30894673 + Charlie5 DNA MER1_type 2236 2297 -327 2366 98 0 19 chr20 35773332 35773639 -30894366 - AluSg SINE Alu -9 301 1 1049 180 60 90 chr20 35773639 35773668 -30894337 + Charlie5 DNA MER1_type 2297 2325 -299 2300 95 7 3 chr20 35773668 35773962 -30894043 + AluSx SINE Alu 1 295 -17 1049 180 60 90 chr20 35773962 35774091 -30893914 + Charlie5 DNA MER1_type 2325 2456 -168 1791 162 19 13 chr20 35774091 35774400 -30893605 - AluJo SINE Alu -1 311 1 1049 180 60 90 chr20 35774400 35774513 -30893492 + Charlie5 DNA MER1_type 2456 2560 -64 2059 131 3 0 chr20 35774513 35774816 -30893189 + AluSx SINE Alu 1 304 0 1049 180 60 90 chr20 35774816 35774879 -30893126 + Charlie5 DNA MER1_type 2560 2623 -1 2491 73 0 13 chr20 35775065 35775367 -30892638 - AluY SINE Alu -13 298 1 332 281 152 34 chr20 35775403 35775581 -30892424 + MIR SINE MIR 46 244 -18 270 193 105 0 chr20 35775843 35775900 -30892105 - MIR SINE MIR -65 143 81 206 243 20 169 chr20 35776036 35776056 -30891949 - MIR3 SINE MIR -25 183 162 2544 72 3 0 chr20 35776056 35776361 -30891644 - AluSp SINE Alu -7 306 1 206 243 20 169 chr20 35776361 35776488 -30891517 - MIR3 SINE MIR -46 162 58 205 171 0 0 chr20 35776644 35776679 -30891326 + (CA)n Simple_repeat Simple_repeat 2 36 0 360 0 0 0 chr20 35776743 35776783 -30891222 + (CA)n Simple_repeat Simple_repeat 2 41 0 387 290 0 0 chr20 35776901 35777018 -30890987 + MIR SINE MIR 42 157 -68 361 296 11 0 chr20 35777021 35777153 -30890852 + MIR SINE MIR 4 140 -68 573 246 128 26 chr20 35777184 35777379 -30890626 - MIR SINE MIR -38 224 10 2543 89 0 3 chr20 35777624 35777937 -30890068 + AluSx SINE Alu 1 312 0 238 284 0 15 chr20 35777944 35778011 -30889994 - MIR3 SINE MIR -41 167 102 547 308 23 9 chr20 35778060 35778281 -30889724 + L2 LINE L2 2466 2689 -625 435 83 0 0 chr20 35779529 35779589 -30888416 + (TG)n Simple_repeat Simple_repeat 1 60 0 244 253 0 36 chr20 35780662 35780745 -30887260 - MLT1K LTR MaLR -3 585 506 384 208 0 62 chr20 35780923 35781019 -30886986 - MLT1K LTR MaLR -382 206 117 735 244 73 39 chr20 35781162 35781396 -30886609 - MIR SINE MIR 0 262 21 394 257 86 7 chr20 35781429 35781569 -30886436 - L3 LINE CR1 -96 1481 1331 473 220 124 133 chr20 35781649 35781732 -30886273 - MIR SINE MIR -1 261 179 2141 124 7 0 chr20 35781732 35782015 -30885990 + AluSx SINE Alu 3 287 -25 473 220 124 133 chr20 35782015 35782172 -30885833 - MIR SINE MIR -83 179 23 234 246 31 0 chr20 35783065 35783130 -30884875 - MIR SINE MIR -96 166 100 491 250 32 60 chr20 35783635 35783850 -30884155 - MIR SINE MIR -43 219 13 1123 99 0 43 chr20 35784335 35784496 -30883509 + AluSg/x SINE Alu 144 297 -13 464 164 98 33 chr20 35784670 35784792 -30883213 + L1MB7 LINE L1 6055 6184 0 216 204 0 0 chr20 35784833 35784877 -30883128 + L2 LINE L2 3270 3313 0 26 30 0 0 chr20 35784886 35784919 -30883086 + AT_rich Low_complexity Low_complexity 1 33 0 332 261 0 54 chr20 35784949 35785060 -30882945 - MIR SINE MIR -69 193 89 2107 123 20 0 chr20 35785441 35785733 -30882272 + AluSx SINE Alu 1 298 -14 483 145 0 0 chr20 35785736 35785819 -30882186 + (GGGGA)n Simple_repeat Simple_repeat 3 85 0 211 301 36 12 chr20 35786050 35786133 -30881872 - MIR3 SINE MIR -117 91 7 555 244 122 39 chr20 35786254 35786459 -30881546 - MIR SINE MIR -12 250 29 219 310 14 14 chr20 35786849 35786920 -30881085 - L2 LINE L2 -20 3252 3182 1597 164 32 86 chr20 35786926 35787084 -30880921 + MLT1A1 LTR MaLR 1 166 -199 522 119 18 83 chr20 35787084 35787193 -30880812 + U13 snRNA snRNA 3 104 0 1597 164 32 86 chr20 35787193 35787407 -30880598 + MLT1A1 LTR MaLR 166 353 -12 250 361 21 7 chr20 35787522 35787666 -30880339 + MIR3 SINE MIR 9 154 -54 192 297 93 8 chr20 35788061 35788179 -30879826 - MIR3 SINE MIR -74 134 7 451 272 74 19 chr20 35788815 35788977 -30879028 + MIR3 SINE MIR 32 202 -6 218 337 47 0 chr20 35789420 35789506 -30878499 + MIR SINE MIR 57 146 -116 1988 132 33 0 chr20 35789553 35789850 -30878155 - AluSx SINE Alu 0 308 3 193 288 68 0 chr20 35789957 35790016 -30877989 - MIR SINE MIR -6 256 194 491 273 88 90 chr20 35790037 35790087 -30877918 + L2 LINE L2 2665 2714 -558 2428 65 0 32 chr20 35790087 35790419 -30877586 + AluY SINE Alu 1 311 0 491 273 88 90 chr20 35790419 35790730 -30877275 + L2 LINE L2 2714 3023 -249 239 312 32 32 chr20 35790808 35790901 -30877104 + L2 LINE L2 3221 3313 0 198 244 0 0 chr20 35790936 35790981 -30877024 + L2 LINE L2 3210 3254 -18 624 311 26 4 chr20 35791432 35791660 -30876345 + MIR SINE MIR 29 261 -1 2601 63 3 0 chr20 35792484 35792786 -30875219 - AluSp SINE Alu -10 303 1 511 247 93 6 chr20 35793696 35793858 -30874147 + MIR3 SINE MIR 22 197 -11 391 318 93 13 chr20 35794208 35794359 -30873646 + MIR SINE MIR 28 190 -72 185 349 83 0 chr20 35795689 35795821 -30872184 + L2 LINE L2 1994 2136 -1178 744 200 65 35 chr20 35795878 35796048 -30871957 - FAM SINE Alu 0 175 1 2312 123 0 0 chr20 35796051 35796361 -30871644 - AluSx SINE Alu -1 311 2 21 36 0 0 chr20 35796365 35796393 -30871612 + AT_rich Low_complexity Low_complexity 1 28 0 497 245 80 37 chr20 35796564 35796827 -30871178 - L1ME2 LINE L1 -327 5837 5565 261 0 0 0 chr20 35796908 35796937 -30871068 + (TC)n Simple_repeat Simple_repeat 2 30 0 2264 105 3 10 chr20 35796937 35797096 -30870909 - AluSq SINE Alu -20 293 135 2413 84 3 0 chr20 35797096 35797395 -30870610 - AluSp SINE Alu -13 300 1 2264 105 3 10 chr20 35797395 35797530 -30870475 - AluSq SINE Alu -178 135 1 320 317 17 17 chr20 35797681 35797801 -30870204 + MIR SINE MIR 103 222 -40 269 336 55 0 chr20 35797811 35797921 -30870084 - MIR SINE MIR -74 134 19 1730 190 108 40 chr20 35798248 35798721 -30869284 - MLT1D LTR MaLR 0 505 1 363 266 216 0 chr20 35799459 35799598 -30868407 + MIR3 SINE MIR 37 205 -3 2125 110 13 10 chr20 35799695 35799994 -30868011 + AluJb SINE Alu 1 300 -12 211 282 120 43 chr20 35800092 35800209 -30867796 - MIR SINE MIR -67 141 16 339 186 0 14 chr20 35800223 35800293 -30867712 - MIR SINE MIR -170 92 24 395 331 43 12 chr20 35800412 35800575 -30867430 + MIR3 SINE MIR 35 202 -6 2212 123 3 13 chr20 35800973 35801283 -30866722 - AluSx SINE Alu -5 307 1 592 273 60 0 chr20 35801317 35801500 -30866505 - MIR SINE MIR -53 209 16 444 288 74 0 chr20 35801533 35801696 -30866309 + MIR SINE MIR 23 197 -65 2663 137 25 74 chr20 35802254 35802300 -30865705 - L1MB3 LINE L1 -7 6176 6129 1830 157 0 30 chr20 35802300 35802600 -30865405 - AluJb SINE Alu -21 291 1 2663 137 25 74 chr20 35802600 35802699 -30865306 - L1MB3 LINE L1 -54 6129 6027 1609 202 10 3 chr20 35802699 35802991 -30865014 - AluJo SINE Alu -5 307 14 1474 165 21 118 chr20 35802995 35803183 -30864822 - AluJb SINE Alu -5 307 165 2036 150 3 7 chr20 35803183 35803490 -30864515 - AluJb SINE Alu 0 312 7 1474 165 21 118 chr20 35803490 35803641 -30864364 - AluJb SINE Alu -147 165 1 2230 112 3 0 chr20 35803648 35803944 -30864061 - AluSp SINE Alu -16 297 1 2663 137 25 74 chr20 35803944 35804377 -30863628 - L1MB3 LINE L1 -165 6018 5613 2211 90 13 7 chr20 35804383 35804682 -30863323 - AluSx SINE Alu -11 301 1 771 311 28 0 chr20 35804696 35804944 -30863061 - MIR SINE MIR -6 256 2 344 236 0 22 chr20 35805566 35805655 -30862350 - L1MC5 LINE L1 -50 7911 7825 333 233 39 43 chr20 35805731 35805841 -30862164 + MIR3 SINE MIR 56 165 -67 2426 94 7 0 chr20 35805841 35806150 -30861855 - AluSp SINE Alu -2 311 1 333 233 39 43 chr20 35806150 35806163 -30861842 + MIR3 SINE MIR 165 177 -55 2076 134 0 49 chr20 35806163 35806491 -30861514 - AluSx SINE Alu 0 312 1 333 233 39 43 chr20 35806491 35806502 -30861503 + MIR3 SINE MIR 177 190 -42 331 254 180 17 chr20 35806516 35806664 -30861341 + MIR SINE MIR 34 195 -62 194 241 76 89 chr20 35807299 35807378 -30860627 + MIR SINE MIR 74 151 -57 705 300 44 58 chr20 35807841 35807946 -30860059 - L1ME4a LINE L1 -92 6029 5924 2451 92 3 6 chr20 35807946 35808260 -30859745 + AluSq SINE Alu 1 313 0 705 300 44 58 chr20 35808260 35808674 -30859331 - L1ME4a LINE L1 -197 5924 5517 195 42 0 0 chr20 35808858 35808882 -30859123 + (CTGTG)n Simple_repeat Simple_repeat 3 26 0 435 19 0 0 chr20 35809251 35809303 -30858702 + (TG)n Simple_repeat Simple_repeat 2 53 0 231 133 0 0 chr20 35809820 35809865 -30858140 + (TG)n Simple_repeat Simple_repeat 1 45 0 2528 90 0 0 chr20 35809961 35810273 -30857732 - AluSx SINE Alu 0 312 1 443 234 170 0 chr20 35810275 35810416 -30857589 - MIR3 SINE MIR -27 181 17 620 237 216 0 chr20 35810897 35811087 -30856918 - MIR SINE MIR -2 260 30 603 189 31 99 chr20 35811139 35811282 -30856723 - MER5A DNA MER1_type -8 181 53 1884 75 0 36 chr20 35811282 35811535 -30856470 + AluSg1 SINE Alu 55 298 -11 603 189 31 99 chr20 35811535 35811582 -30856423 - MER5A DNA MER1_type -136 53 4 256 269 119 22 chr20 35811635 35811769 -30856236 + L2 LINE L2 2601 2747 -567 567 177 323 0 chr20 35811788 35811946 -30856059 + MER3 DNA MER1_type 1 209 0 1971 171 0 3 chr20 35812985 35813295 -30854710 + AluJb SINE Alu 1 309 -3 315 157 259 19 chr20 35813416 35813524 -30854481 - L1ME3A LINE L1 -10 6160 6027 619 254 64 47 chr20 35813547 35813783 -30854222 + MIR SINE MIR 4 243 -19 466 266 49 0 chr20 35815192 35815335 -30852670 - MIR SINE MIR -34 228 79 249 236 182 36 chr20 35815903 35816013 -30851992 + L2 LINE L2 2947 3072 -200 934 178 138 57 chr20 35816033 35816183 -30851822 - MER33 DNA MER1_type -2263 322 186 2387 84 0 10 chr20 35816183 35816479 -30851526 - AluSq SINE Alu -8 305 13 934 178 138 57 chr20 35816479 35816626 -30851379 - MER33 DNA MER1_type -2399 186 1 670 264 92 13 chr20 35816645 35816872 -30851133 + MIR SINE MIR 11 255 -7 199 307 149 35 chr20 35816912 35817026 -30850979 + L2 LINE L2 3144 3270 -2 284 275 12 25 chr20 35817108 35817188 -30850817 + MIR SINE MIR 71 149 -59 362 264 85 0 chr20 35817485 35817591 -30850414 - MIR SINE MIR -58 150 53 188 300 20 0 chr20 35817686 35817736 -30850269 + MIR SINE MIR 110 160 -102 324 270 40 20 chr20 35817880 35817940 -30850065 + MIR SINE MIR 83 147 -115 2665 26 0 20 chr20 35817940 35818245 -30849760 + AluY SINE Alu 1 299 -12 324 270 40 20 chr20 35818245 35818284 -30849721 + MIR SINE MIR 147 184 -78 24 32 0 0 chr20 35818335 35818366 -30849639 + AT_rich Low_complexity Low_complexity 1 31 0 407 267 82 15 chr20 35819765 35819900 -30848105 - MIR3 SINE MIR -32 176 33 292 289 13 32 chr20 35820616 35820772 -30847233 + G-rich Low_complexity Low_complexity 2 154 0 192 77 0 0 chr20 35820834 35820860 -30847145 + (CCG)n Simple_repeat Simple_repeat 3 28 0 29 28 0 0 chr20 35820912 35820948 -30847057 + GC_rich Low_complexity Low_complexity 1 36 0 321 301 0 26 chr20 35822577 35822690 -30845315 - MIR3 SINE MIR -86 122 13 2237 93 0 0 chr20 35823067 35823356 -30844649 + AluSc SINE Alu 4 292 -17 629 243 178 5 chr20 35823419 35823633 -30844372 - MIR SINE MIR -10 252 2 845 214 63 48 chr20 35824071 35824323 -30843682 - MIR SINE MIR 0 262 7 339 284 113 49 chr20 35824371 35824698 -30843307 - L2 LINE L2 -71 3201 2854 478 284 101 41 chr20 35824732 35824950 -30843055 + MIR SINE MIR 26 256 -6 274 294 54 0 chr20 35825408 35825500 -30842505 + L1ME LINE L1 5713 5809 -312 192 170 85 0 chr20 35825754 35825801 -30842204 - MIR SINE MIR -75 133 83 604 302 25 5 chr20 35825934 35826136 -30841869 + MIR SINE MIR 50 255 -7 2430 88 0 19 chr20 35826422 35826740 -30841265 + AluSx SINE Alu 1 312 0 356 269 89 70 chr20 35826770 35827086 -30840919 - L1ME4a LINE L1 -94 6027 5706 223 274 0 0 chr20 35827399 35827461 -30840544 + MIR SINE MIR 86 147 -115 193 229 0 0 chr20 35827477 35827512 -30840493 - L2 LINE L2 -23 3249 3215 2167 99 3 10 chr20 35827536 35827875 -30840130 - AluSx SINE Alu 0 357 21 1797 159 13 23 chr20 35827882 35828184 -30839821 - AluJo SINE Alu -13 299 1 281 242 165 7 chr20 35828240 35828341 -30839664 - MIR SINE MIR -95 113 6 364 211 0 56 chr20 35828518 35828608 -30839397 + MIR3 SINE MIR 14 98 -110 356 216 207 0 chr20 35829281 35829392 -30838613 - L1ME4a LINE L1 0 6121 5988 497 281 12 24 chr20 35829413 35829580 -30838425 - MIR SINE MIR -10 252 88 944 236 152 39 chr20 35829656 35829976 -30838029 - LTR33 LTR ERVL 0 521 144 2023 125 59 0 chr20 35829976 35830264 -30837741 - AluSx SINE Alu -7 305 1 944 236 152 39 chr20 35830264 35830350 -30837655 - LTR33 LTR ERVL -377 144 69 2170 120 3 19 chr20 35830790 35831106 -30836899 - AluSx SINE Alu -1 311 1 2189 136 0 0 chr20 35831107 35831402 -30836603 - AluSx SINE Alu -17 295 1 227 302 36 72 chr20 35831442 35831537 -30836468 - MIR SINE MIR -62 200 110 2474 90 0 0 chr20 35831537 35831836 -30836169 + AluSx SINE Alu 1 299 -13 227 302 36 72 chr20 35831836 35831879 -30836126 - MIR SINE MIR -152 110 67 276 303 0 0 chr20 35832061 35832137 -30835868 + MIR SINE MIR 79 154 -108 919 214 21 34 chr20 35832335 35832569 -30835436 + MIR SINE MIR 32 262 0 361 300 60 13 chr20 35832565 35832715 -30835290 - L2 LINE L2 -36 3277 3121 * 1693 147 93 7 chr20 35832725 35833004 -30835001 + AluSx SINE Alu 1 303 -9 697 133 7 15 chr20 35833027 35833162 -30834843 + L1MB4 LINE L1 6013 6146 -34 447 299 46 94 chr20 35833284 35833545 -30834460 - L2 LINE L2 -345 2969 2734 2126 120 0 3 chr20 35833545 35833874 -30834131 + AluSx SINE Alu 1 328 0 447 299 46 94 chr20 35833874 35834048 -30833957 - L2 LINE L2 -580 2734 2553 453 335 28 56 chr20 35834629 35834657 -30833348 - MIR SINE MIR -14 248 221 2052 95 3 76 chr20 35834657 35834972 -30833033 - AluSc SINE Alu -17 292 1 453 335 28 56 chr20 35834972 35835066 -30832939 - MIR SINE MIR -41 221 126 2223 105 17 3 chr20 35835066 35835360 -30832645 + AluSg SINE Alu 1 298 -12 453 335 28 56 chr20 35835360 35835487 -30832518 - MIR SINE MIR -136 126 5 25 65 0 0 chr20 35836261 35836307 -30831698 + AT_rich Low_complexity Low_complexity 1 46 0 251 276 143 0 chr20 35836442 35836540 -30831465 - L1ME4a LINE L1 -65 6056 5945 2200 99 36 10 chr20 35838196 35838499 -30829506 - AluSx SINE Alu -1 311 1 2359 110 3 0 chr20 35838710 35839019 -30828986 - AluSx SINE Alu -1 311 2 186 43 0 0 chr20 35839058 35839081 -30828924 + (TC)n Simple_repeat Simple_repeat 2 24 0 221 256 11 56 chr20 35839716 35839806 -30828199 + CT-rich Low_complexity Low_complexity 2 87 0 441 299 65 39 chr20 35840175 35840226 -30827779 - MIR SINE MIR -6 256 208 1644 132 82 69 chr20 35840226 35840385 -30827620 - AluJo SINE Alu -5 307 141 2129 133 0 19 chr20 35840385 35840693 -30827312 - AluSx SINE Alu -10 302 1 1644 132 82 69 chr20 35840693 35840836 -30827169 - AluJo SINE Alu -171 141 1 441 299 65 39 chr20 35840836 35841015 -30826990 - MIR SINE MIR -54 208 20 196 309 128 21 chr20 35841119 35841213 -30826792 - MIR3 SINE MIR -46 162 59 2420 107 0 0 chr20 35842742 35843052 -30824953 - AluSx SINE Alu -2 310 1 2102 118 3 55 chr20 35844895 35845225 -30822780 + AluSq SINE Alu 1 313 0 200 218 73 0 chr20 35845299 35845354 -30822651 - MIR SINE MIR -84 124 66 334 280 20 0 chr20 35845496 35845596 -30822409 - MIR SINE MIR -86 122 21 276 296 66 62 chr20 35846167 35846410 -30821595 - L3 LINE CR1 -84 1493 1250 324 290 138 0 chr20 35846505 35846650 -30821355 + MIR SINE MIR 88 252 -10 618 235 206 5 chr20 35846670 35846874 -30821131 + MIR SINE MIR 2 246 -16 232 67 0 44 chr20 35846882 35846927 -30821078 + (TTA)n Simple_repeat Simple_repeat 2 44 0 570 226 111 46 chr20 35846990 35847207 -30820798 + MIR SINE MIR 14 244 -18 221 391 8 8 chr20 35847531 35847664 -30820341 - L3 LINE CR1 -710 867 735 326 229 46 9 chr20 35847790 35847899 -30820106 - MER103 DNA DNA -8 158 46 806 219 36 0 chr20 35847962 35848154 -30819851 + MIR SINE MIR 35 233 -29 201 121 0 0 chr20 35848161 35848194 -30819811 + (TTTC)n Simple_repeat Simple_repeat 4 36 0 281 244 58 0 chr20 35848206 35848292 -30819713 + MIR SINE MIR 96 186 -76 263 307 165 29 chr20 35848623 35848892 -30819113 - Charlie8 DNA MER1_type -2142 275 47 2154 138 0 0 chr20 35850083 35850380 -30817625 + AluSx SINE Alu 11 307 -5 602 313 36 5 chr20 35851791 35851986 -30816019 + MIR SINE MIR 7 207 -55 212 311 29 39 chr20 35852063 35852166 -30815839 + MIR3 SINE MIR 56 157 -51 278 211 332 0 chr20 35852167 35852290 -30815715 - MER20 DNA MER1_type 0 219 56 297 314 171 0 chr20 35852658 35852798 -30815207 + MER117 DNA MER1_type 34 197 0 1220 208 37 0 chr20 35853016 35853257 -30814748 + MIR SINE MIR 13 262 0 414 317 41 7 chr20 35854076 35854221 -30813784 + L2 LINE L2 3122 3271 -1 218 313 0 12 chr20 35854222 35854305 -30813700 + (TGAA)n Simple_repeat Simple_repeat 2 83 0 549 0 0 0 chr20 35854702 35854763 -30813242 + (CA)n Simple_repeat Simple_repeat 2 62 0 252 0 0 0 chr20 35854762 35854790 -30813215 + (GA)n Simple_repeat Simple_repeat 2 29 0 * 1094 100 7 0 chr20 35854818 35854958 -30813047 + AluSq/x SINE Alu 1 141 -172 437 100 0 0 chr20 35854958 35855028 -30812977 + Alu SINE Alu 241 310 -1 608 313 97 45 chr20 35855192 35855994 -30812011 + L2 LINE L2 2467 3312 -1 1881 140 31 7 chr20 35856035 35856328 -30811677 + AluJo SINE Alu 13 312 0 337 292 0 44 chr20 35857570 35857683 -30810322 + MER5A DNA MER1_type 9 116 -73 376 270 142 7 chr20 35857858 35858006 -30809999 + MIR SINE MIR 82 249 -13 2424 101 16 0 chr20 35858064 35858371 -30809634 + AluSx SINE Alu 1 312 0 2332 99 3 10 chr20 35858371 35858675 -30809330 + AluSc SINE Alu 1 302 -7 260 374 46 39 chr20 35858748 35859029 -30808976 - L2 LINE L2 -5 3267 2985 272 270 108 60 chr20 35859310 35859495 -30808510 + MIR SINE MIR 20 213 -49 587 306 72 10 chr20 35859918 35860111 -30807894 - MIR SINE MIR -12 250 46 248 203 68 14 chr20 35860133 35860207 -30807798 + MIR SINE MIR 42 119 -89 327 322 77 0 chr20 35862276 35862419 -30805586 + MIR3 SINE MIR 23 176 -32 462 286 23 0 chr20 35864437 35864570 -30803435 + MER5A DNA MER1_type 50 185 -4 749 231 77 0 chr20 35864940 35865109 -30802896 + MIR SINE MIR 43 224 -38 390 311 113 0 chr20 35865291 35865442 -30802563 - MIR3 SINE MIR -13 195 28 211 297 93 42 chr20 35866276 35866394 -30801611 + MIR SINE MIR 89 212 -50 228 263 0 0 chr20 35866892 35866968 -30801037 + CT-rich Low_complexity Low_complexity 1 76 0 199 311 159 42 chr20 35868351 35868615 -30799390 - L3 LINE CR1 -150 1427 1133 2248 92 27 0 chr20 35868632 35868761 -30799244 + AluSx SINE Alu 1 125 -187 234 0 0 0 chr20 35868761 35868787 -30799218 + (TAA)n Simple_repeat Simple_repeat 2 27 0 2248 92 27 0 chr20 35868787 35868951 -30799054 + AluSx SINE Alu 125 302 -10 345 273 87 37 chr20 35869388 35869549 -30798456 + MIR SINE MIR 84 252 -10 361 252 58 58 chr20 35870178 35870317 -30797688 + MIR3 SINE MIR 10 148 -60 1222 113 0 23 chr20 35870592 35870769 -30797236 - AluSp SINE Alu -4 309 137 2347 93 0 3 chr20 35870770 35871061 -30796944 - AluSc SINE Alu -19 290 1 430 295 80 2 chr20 35871420 35871587 -30796418 + MIR3 SINE MIR 27 204 -4 187 264 33 55 chr20 35876776 35876867 -30791138 + L2 LINE L2 3008 3096 -217 199 178 22 22 chr20 35876953 35876998 -30791007 + L2 LINE L2 3266 3310 -3 1155 113 5 54 chr20 35877039 35877224 -30790781 + FRAM SINE Alu 1 175 -1 2271 116 20 0 chr20 35877227 35877529 -30790476 + AluSx SINE Alu 3 310 -2 302 303 0 20 chr20 35877576 35877675 -30790330 + MER102a DNA MER1_type 234 330 0 2236 121 0 0 chr20 35877692 35877990 -30790015 + AluSx SINE Alu 1 298 -14 1809 154 47 23 chr20 35879236 35879535 -30788470 + AluJo SINE Alu 1 306 -6 193 156 0 0 chr20 35879659 35879692 -30788313 + MIR SINE MIR 74 105 -157 365 317 92 16 chr20 35879962 35880265 -30787740 - L1MC4a LINE L1 -1908 5900 5575 243 247 106 24 chr20 35881052 35881137 -30786868 + MIR SINE MIR 59 150 -112 610 283 26 39 chr20 35881225 35881455 -30786550 - MIR SINE MIR -33 229 3 206 206 0 0 chr20 35881811 35881845 -30786160 + (TCCA)n Simple_repeat Simple_repeat 2 35 0 193 223 233 19 chr20 35881845 35881948 -30786057 - L2 LINE L2 0 3313 3189 * 290 253 11 23 chr20 35881931 35882018 -30785987 - L2 LINE L2 0 3272 3187 * 681 230 5 63 chr20 35882017 35882208 -30785797 + MIR SINE MIR 60 239 -23 309 272 72 73 chr20 35882306 35882713 -30785292 - L2 LINE L2 -203 3069 2661 318 318 48 0 chr20 35882742 35882868 -30785137 - L2 LINE L2 -2 3311 3180 632 172 210 6 chr20 35883058 35883215 -30784790 + MER5A DNA MER1_type 1 189 0 670 228 68 14 chr20 35884233 35884483 -30783522 + MIR SINE MIR 3 262 0 306 257 38 29 chr20 35884598 35884703 -30783302 - MIR SINE MIR -67 141 36 204 240 307 13 chr20 35884721 35884796 -30783209 + L2 LINE L2 3176 3272 0 243 333 11 11 chr20 35885379 35885472 -30782533 + MIR3 SINE MIR 13 105 -103 216 286 26 13 chr20 35886426 35886503 -30781502 - L2 LINE L2 -1 3312 3235 270 284 88 61 chr20 35887484 35887632 -30780373 - L2 LINE L2 -5 3267 3116 299 275 196 0 chr20 35888234 35888372 -30779633 + MIR3 SINE MIR 36 200 -8 2225 111 0 7 chr20 35889021 35889318 -30778687 - AluY SINE Alu -16 295 1 1059 111 0 0 chr20 35889318 35889453 -30778552 - AluSq/x SINE Alu -177 136 2 494 256 8 0 chr20 35889663 35889784 -30778221 + L1ME3 LINE L1 5854 5975 -187 444 251 34 50 chr20 35889827 35890020 -30777985 + L1ME3 LINE L1 5979 6162 0 1015 160 52 45 chr20 35890218 35890486 -30777519 + MER33 DNA MER1_type 1 226 -2359 2015 132 14 7 chr20 35890486 35890781 -30777224 + AluSx SINE Alu 1 297 -15 1015 160 52 45 chr20 35890781 35890841 -30777164 + MER33 DNA MER1_type 226 284 -40 2282 113 0 0 chr20 35890949 35891240 -30776765 - AluSx SINE Alu -19 293 3 342 130 0 0 chr20 35891250 35891304 -30776701 + MER33 DNA MER1_type 310 363 0 268 271 31 42 chr20 35891469 35891565 -30776440 - MER5A DNA MER1_type -31 158 64 402 278 53 20 chr20 35891617 35891768 -30776237 + MIR3 SINE MIR 3 158 -50 310 283 10 20 chr20 35892357 35892456 -30775549 + MIR SINE MIR 56 153 -109 410 296 0 43 chr20 35892465 35892682 -30775323 - MIR SINE MIR 0 262 16 195 289 0 0 chr20 35892752 35892804 -30775201 + MIR SINE MIR 211 262 0 207 0 0 0 chr20 35893047 35893070 -30774935 + (CAAAC)n Simple_repeat Simple_repeat 2 24 0 2027 144 13 7 chr20 35893153 35893458 -30774547 + AluJo SINE Alu 1 307 -5 350 273 167 0 chr20 35893510 35893660 -30774345 + MIR SINE MIR 73 247 -15 242 259 235 0 chr20 35894117 35894202 -30773803 + MIR SINE MIR 41 145 -63 331 291 91 0 chr20 35894268 35894378 -30773627 - L2 LINE L2 -5 3267 3148 418 249 129 91 chr20 35894414 35894540 -30773465 - MIR SINE MIR 0 262 142 980 178 6 0 chr20 35894540 35894703 -30773302 + FAM SINE Alu 1 164 -11 418 249 129 91 chr20 35894703 35894817 -30773188 - MIR SINE MIR -120 142 13 200 273 30 15 chr20 35895101 35895167 -30772838 + MIR SINE MIR 25 91 -171 640 220 0 0 chr20 35895167 35895285 -30772720 - FAM SINE Alu -57 128 11 201 108 0 0 chr20 35895606 35895643 -30772362 + (TA)n Simple_repeat Simple_repeat 1 37 0 278 210 32 0 chr20 35897486 35897548 -30770457 - L2 LINE L2 -4 3268 3205 487 313 43 39 chr20 35898402 35898597 -30769408 + MIR3 SINE MIR 5 201 -7 407 35 18 0 chr20 35898932 35898989 -30769016 + (TC)n Simple_repeat Simple_repeat 2 59 0 628 285 119 34 chr20 35899065 35899451 -30768554 - L2 LINE L2 -5 3308 2890 490 221 35 74 chr20 35899540 35899637 -30768368 + MER113 DNA MER1_type? 8 107 -414 2437 95 0 3 chr20 35899637 35899943 -30768062 + AluSx SINE Alu 1 305 -7 490 221 35 74 chr20 35899943 35900076 -30767929 + MER113 DNA MER1_type? 107 229 -292 334 316 65 39 chr20 35900219 35900374 -30767631 - L1MC4 LINE L1 -1277 6765 6607 1014 101 137 0 chr20 35900756 35900924 -30767081 + MER20 DNA MER1_type 29 219 0 393 249 179 18 chr20 35901315 35901480 -30766525 + MIR SINE MIR 2 186 -63 2405 85 0 0 chr20 35901494 35901787 -30766218 + AluSx SINE Alu 1 293 -19 369 242 0 11 chr20 35901802 35901893 -30766112 + MLT2C1 LTR ERVL 306 395 -2 270 259 37 37 chr20 35901946 35902054 -30765951 - L2 LINE L2 0 3272 3165 234 316 68 15 chr20 35902832 35902965 -30765040 + MIR SINE MIR 18 157 -105 386 310 220 13 chr20 35903113 35903543 -30764462 - L2 LINE L2 -194 3078 2544 312 254 0 0 chr20 35903625 35903692 -30764313 - L2 LINE L2 -8 3264 3198 2094 109 3 11 chr20 35903871 35904204 -30763801 - AluSg SINE Alu 0 331 1 669 248 80 13 chr20 35904226 35904464 -30763541 + MER112 DNA MER1_type 1 254 -2 2128 140 3 0 chr20 35904595 35904903 -30763102 + AluSx SINE Alu 1 309 -3 263 369 43 0 chr20 35904922 35905063 -30762942 + L2 LINE L2 3122 3268 -4 188 346 26 0 chr20 35905270 35905348 -30762657 + MIR SINE MIR 70 149 -59 293 295 188 0 chr20 35905779 35905891 -30762114 + MIR SINE MIR 118 250 -12 245 292 32 110 chr20 35906854 35907008 -30760997 - MER5A DNA MER1_type -36 142 1 206 261 0 0 chr20 35907049 35907095 -30760910 - MIR SINE MIR -133 75 30 661 294 148 88 chr20 35907190 35907625 -30760380 - L1ME4a LINE L1 0 6121 5713 2048 90 47 7 chr20 35907625 35907902 -30760103 + AluSq SINE Alu 1 288 -25 661 294 148 88 chr20 35907902 35908238 -30759767 - L1ME4a LINE L1 -408 5713 5304 865 171 0 26 chr20 35908261 35908413 -30759592 - AluJb SINE Alu -5 307 160 2419 57 0 11 chr20 35908485 35908813 -30759192 - AluY SINE Alu 0 325 1 1689 181 18 0 chr20 35908967 35909248 -30758757 - AluJo SINE Alu -1 311 26 940 194 152 23 chr20 35909817 35910034 -30757971 - MIR SINE MIR -10 252 8 180 282 182 45 chr20 35910205 35910315 -30757690 + MIR SINE MIR 76 200 -62 517 290 25 12 chr20 35910334 35910496 -30757509 + MER5A DNA MER1_type 25 188 -1 214 348 167 0 chr20 35910631 35910769 -30757236 - L2 LINE L2 -9 3263 3103 1905 138 7 21 chr20 35911859 35912142 -30755863 + AluJo SINE Alu 1 279 -33 489 278 80 25 chr20 35912144 35912306 -30755699 - MIR SINE MIR -69 193 23 225 0 0 0 chr20 35912979 35913004 -30755001 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 368 311 9 19 chr20 35913107 35913213 -30754792 - L2 LINE L2 -1 3271 3167 211 303 173 40 chr20 35913354 35913677 -30754328 + L2 LINE L2 2564 2929 -385 2188 111 0 3 chr20 35913716 35914013 -30753992 + AluSq SINE Alu 11 306 -7 685 126 49 49 chr20 35914013 35914156 -30753849 - L1MB1 LINE L1 -6 6162 6020 212 224 26 13 chr20 35914236 35914312 -30753693 + CT-rich Low_complexity Low_complexity 2 78 0 1944 114 0 8 chr20 35914446 35914710 -30753295 - AluSx SINE Alu -2 310 49 519 250 56 14 chr20 35915776 35915920 -30752085 - MIR SINE MIR -56 206 57 526 256 35 17 chr20 35916702 35916874 -30751131 + L1ME1 LINE L1 5942 6116 -50 1142 174 8 58 chr20 35916975 35917037 -30750968 + AluJo SINE Alu 84 148 -164 1922 170 3 0 chr20 35917037 35917331 -30750674 + AluJb SINE Alu 3 297 -15 1142 174 8 58 chr20 35917331 35917509 -30750496 + AluJo SINE Alu 148 312 0 483 292 92 64 chr20 35918424 35918815 -30749190 - L2 LINE L2 0 3272 2871 4251 154 11 7 chr20 35919826 35920578 -30747427 + L1MB3 LINE L1 5254 6008 -175 1215 169 55 0 chr20 35920578 35920814 -30747191 + L1MB3 LINE L1 5935 6183 0 274 75 57 19 chr20 35920827 35920855 -30747150 + L1MB3 LINE L1 6129 6154 -29 1791 160 89 3 chr20 35920855 35921192 -30746813 - MER47A DNA MER2_type 0 366 1 274 75 57 19 chr20 35921192 35921216 -30746789 + L1MB3 LINE L1 6154 6183 0 1519 184 40 29 chr20 35923364 35923678 -30744327 + L1MB7 LINE L1 5816 6136 -48 2411 64 17 7 chr20 35923678 35923974 -30744031 + AluY SINE Alu 1 299 -12 1519 184 40 29 chr20 35923974 35924007 -30743998 + L1MB7 LINE L1 6136 6167 -17 232 324 14 14 chr20 35924008 35924079 -30743926 - MER5A DNA MER1_type -45 144 74 333 0 0 0 chr20 35924263 35924300 -30743705 + (CA)n Simple_repeat Simple_repeat 2 38 0 395 269 93 26 chr20 35924319 35924512 -30743493 - MIR SINE MIR -36 226 21 317 316 53 0 chr20 35924587 35924682 -30743323 + MIR SINE MIR 54 153 -55 2481 64 37 0 chr20 35924687 35924985 -30743020 + AluSc SINE Alu 1 309 0 1152 271 76 58 chr20 35926693 35926838 -30741167 - L2 LINE L2 -109 3204 3063 2598 60 3 0 chr20 35926838 35927139 -30740866 - AluY SINE Alu -9 302 1 1152 271 76 58 chr20 35927139 35927471 -30740534 - L2 LINE L2 -250 3063 2703 950 173 42 0 chr20 35927471 35927639 -30740366 - FAM SINE Alu 0 175 1 1152 271 76 58 chr20 35927639 35927847 -30740158 - L2 LINE L2 -610 2703 2500 1915 143 3 17 chr20 35928239 35928533 -30739472 + AluJo SINE Alu 8 297 -15 869 153 0 0 chr20 35929301 35929425 -30738580 + FLAM_C SINE Alu 4 127 -6 303 172 52 0 chr20 35929647 35929705 -30738300 - L1M LINE L1 -750 5371 5311 24 0 0 0 chr20 35929950 35929974 -30738031 + AT_rich Low_complexity Low_complexity 1 24 0 419 324 41 44 chr20 35930500 35930815 -30737190 + MLT1K LTR MaLR 212 525 -63 323 227 216 10 chr20 35930905 35931002 -30737003 - MIR3 SINE MIR -6 202 86 354 248 147 64 chr20 35931286 35931504 -30736501 - MIR SINE MIR -12 250 15 534 204 72 20 chr20 35931619 35931715 -30736290 - Charlie8 DNA MER1_type -167 163 55 423 0 0 0 chr20 35931715 35931762 -30736243 + (CA)n Simple_repeat Simple_repeat 2 48 0 534 204 72 20 chr20 35931762 35931817 -30736188 - Charlie8 DNA MER1_type -275 55 4 280 273 124 0 chr20 35932214 35932335 -30735670 + MIR3 SINE MIR 10 145 -63 455 306 107 25 chr20 35933154 35933396 -30734609 + L3 LINE CR1 1301 1562 -15 509 243 53 13 chr20 35934213 35934365 -30733640 + MIR SINE MIR 8 165 -97 263 242 126 21 chr20 35934788 35934883 -30733122 - MIR3 SINE MIR 0 208 104 * 374 290 27 25 chr20 35934864 35935023 -30732982 - MIR3 SINE MIR -16 192 31 24 0 0 0 chr20 35935334 35935358 -30732647 + GC_rich Low_complexity Low_complexity 1 24 0 630 300 109 19 chr20 35935537 35936014 -30731991 - L1ME4a LINE L1 -3 6118 5599 343 293 93 14 chr20 35936077 35936217 -30731788 - HAL1b LINE L1 -11 1337 1187 2442 93 0 0 chr20 35936263 35936573 -30731432 - AluY SINE Alu -1 310 1 1812 174 13 35 chr20 35936625 35936941 -30731064 - AluJo SINE Alu -3 309 1 272 325 76 10 chr20 35936946 35937143 -30730862 - L1ME LINE L1 -297 5824 5615 226 170 19 0 chr20 35937143 35937196 -30730809 + T-rich Low_complexity Low_complexity 1 54 0 277 288 0 0 chr20 35937956 35938022 -30729983 + GA-rich Low_complexity Low_complexity 2 67 0 1908 137 20 13 chr20 35938123 35938423 -30729582 + AluJo SINE Alu 1 302 -10 2253 119 3 0 chr20 35939175 35939486 -30728519 + AluSx SINE Alu 1 312 0 563 207 26 9 chr20 35939569 35939685 -30728320 - MIR SINE MIR -94 168 51 332 214 14 14 chr20 35939868 35939938 -30728067 + L2 LINE L2 3197 3266 -6 687 171 86 0 chr20 35939940 35940057 -30727948 + FLAM_A SINE Alu 1 127 -6 204 327 36 36 chr20 35940117 35940227 -30727778 + MIR SINE MIR 38 147 -61 189 0 0 0 chr20 35940475 35940496 -30727509 + (CCCCAG)n Simple_repeat Simple_repeat 1 21 0 339 234 262 0 chr20 35941017 35941158 -30726847 + MIR SINE MIR 29 206 -56 290 321 60 30 chr20 35941696 35941864 -30726141 - L2 LINE L2 -181 3091 2919 294 202 0 112 chr20 35942301 35942390 -30725615 - MIR SINE MIR -75 187 109 757 293 56 5 chr20 35942417 35942632 -30725373 + MIR SINE MIR 28 253 -9 282 263 35 0 chr20 35942665 35942722 -30725283 + L2 LINE L2 3136 3194 -78 1077 128 0 0 chr20 35942962 35943111 -30724894 + AluSq/x SINE Alu 1 149 -163 195 42 0 0 chr20 35943113 35943137 -30724868 + (GGAGAA)n Simple_repeat Simple_repeat 2 25 0 314 277 84 0 chr20 35943138 35943257 -30724748 + L1M4 LINE L1 3073 3201 -2945 410 168 37 56 chr20 35944016 35944123 -30723882 + LTR16C LTR ERVL 387 491 0 298 353 10 10 chr20 35944408 35944510 -30723495 - L2 LINE L2 -44 3228 3127 260 296 0 28 chr20 35944559 35944630 -30723375 - L2 LINE L2 0 3272 3204 539 191 52 151 chr20 35944674 35944768 -30723237 - MIR SINE MIR -2 260 158 2368 107 0 0 chr20 35944768 35945090 -30722915 - AluSx SINE Alu 0 322 1 1689 113 0 0 chr20 35945090 35945303 -30722702 - AluJb SINE Alu -15 297 85 539 191 52 151 chr20 35945303 35945456 -30722549 - MIR SINE MIR -102 160 35 1449 207 128 71 chr20 35945869 35946424 -30721581 - MLT1G3 LTR MaLR 0 595 11 862 161 11 0 chr20 35946688 35946862 -30721143 + (TCCA)n Simple_repeat Simple_repeat 4 179 0 578 183 122 0 chr20 35946884 35947015 -30720990 + MIR SINE MIR 100 246 -16 2374 67 0 3 chr20 35947015 35947332 -30720673 + AluY SINE Alu 1 316 0 401 322 95 49 chr20 35947797 35948362 -30719643 - L2 LINE L2 -66 3206 2622 2270 120 7 0 chr20 35948632 35948941 -30719064 - AluSx SINE Alu -1 311 1 989 247 96 70 chr20 35948968 35949584 -30718421 - L1MEd LINE L1 -4869 1250 619 2530 239 68 22 chr20 35949621 35949840 -30718165 - L1ME3 LINE L1 -22 6140 5933 2007 153 3 7 chr20 35949840 35950141 -30717864 - AluJo SINE Alu -12 300 1 2530 239 68 22 chr20 35950141 35950661 -30717344 - L1ME3 LINE L1 -229 5933 5367 2026 128 17 10 chr20 35950816 35951113 -30716892 - AluJb SINE Alu -13 299 1 434 285 76 0 chr20 35951138 35951282 -30716723 + MER63A DNA MER1_type 56 210 0 492 244 81 48 chr20 35951283 35951492 -30716513 - MER46C DNA MER2_type -122 216 1 427 281 2 50 chr20 35951781 35951941 -30716064 + MIR SINE MIR 25 174 -34 915 262 106 54 chr20 35952461 35952662 -30715343 - L1ME3 LINE L1 -818 5328 5139 2161 130 3 3 chr20 35952662 35952962 -30715043 - AluJb SINE Alu -12 300 1 915 262 106 54 chr20 35952962 35953317 -30714688 - L1ME3 LINE L1 -1007 5139 4743 3949 168 19 30 chr20 35953318 35954087 -30713918 - L1MD2 LINE L1 0 6359 5599 2287 157 17 7 chr20 35954093 35954501 -30713504 - L1MC1 LINE L1 0 6333 5922 2302 127 11 14 chr20 35954501 35954871 -30713134 - Tigger2 DNA MER2_type 0 2718 2350 582 169 57 24 chr20 35954874 35954998 -30713007 - Tigger2 DNA MER2_type -2590 128 1 4277 116 5 3 chr20 35954998 35955696 -30712309 - L1MC1 LINE L1 -410 5923 5225 1974 162 56 0 chr20 35955696 35956073 -30711932 + Tigger3(Golem) DNA MER2_type 1 398 -2631 * 3375 116 5 84 chr20 35956071 35956137 -30711868 + Tigger3(Golem) DNA MER2_type 2425 2495 -533 2320 109 3 3 chr20 35956137 35956449 -30711556 - AluSx SINE Alu 0 312 1 3375 116 5 84 chr20 35956449 35957038 -30710967 + Tigger3(Golem) DNA MER2_type 2495 3028 0 3729 208 22 23 chr20 35957038 35957999 -30710006 - L1MC1 LINE L1 -920 5226 4267 1840 158 29 0 chr20 35958016 35958312 -30709693 - L1MD2 LINE L1 -639 5603 5282 207 0 0 0 chr20 35958312 35958335 -30709670 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1840 158 29 0 chr20 35958335 35958405 -30709600 - L1MD2 LINE L1 -960 5282 5216 2565 236 55 102 chr20 35958427 35958610 -30709395 - L1MD2 LINE L1 -1411 4735 4545 287 100 0 0 chr20 35958610 35958650 -30709355 - Alu SINE Alu -261 40 1 2565 236 55 102 chr20 35958650 35958859 -30709146 - L1MD2 LINE L1 -1601 4545 4328 2313 108 0 7 chr20 35958859 35959164 -30708841 + AluSx SINE Alu 1 303 -9 2565 236 55 102 chr20 35959164 35959664 -30708341 - L1MD2 LINE L1 -1818 4328 3806 1829 129 4 0 chr20 35959664 35959912 -30708093 - AluSx SINE Alu -63 249 1 2565 236 55 102 chr20 35959912 35959923 -30708082 - L1MD2 LINE L1 -2340 3806 3796 2139 127 0 10 chr20 35959923 35960223 -30707782 - AluSx SINE Alu -15 297 1 2565 236 55 102 chr20 35960223 35960234 -30707771 - L1MD2 LINE L1 -2350 3796 3786 1867 142 4 4 chr20 35960234 35960509 -30707496 - AluSx SINE Alu -11 301 27 2565 236 55 102 chr20 35960509 35961046 -30706959 - L1MD2 LINE L1 -2360 3786 3322 1700 138 24 0 chr20 35961046 35961300 -30706705 + AluSx SINE Alu 32 291 -21 2565 236 55 102 chr20 35961300 35961437 -30706568 - L1MD2 LINE L1 -2824 3322 3180 416 96 55 0 chr20 36161459 36161532 -30506473 + AluY SINE Alu 215 291 -20 21 0 0 0 chr20 36161794 36161815 -30506190 + AT_rich Low_complexity Low_complexity 1 21 0 2187 99 3 3 chr20 36161828 36162131 -30505874 + AluSp SINE Alu 1 303 -10 1667 169 0 28 chr20 36162131 36162421 -30505584 - AluJo SINE Alu -30 282 1 1792 167 0 3 chr20 36162612 36162912 -30505093 + AluJo SINE Alu 11 309 -3 2022 98 24 7 chr20 36163541 36163837 -30504168 - AluSg SINE Alu -9 301 1 189 0 0 0 chr20 36163961 36163982 -30504023 + (CA)n Simple_repeat Simple_repeat 1 21 0 198 0 0 0 chr20 36163985 36164007 -30503998 + (CCA)n Simple_repeat Simple_repeat 1 22 0 1508 176 14 24 chr20 36164431 36164720 -30503285 + AluJo SINE Alu 1 286 -26 198 191 0 0 chr20 36164720 36164762 -30503243 + (TA)n Simple_repeat Simple_repeat 1 42 0 395 240 78 32 chr20 36164770 36165009 -30502996 - L1ME3 LINE L1 -216 5950 5697 1782 145 40 48 chr20 36165014 36165087 -30502918 + Tigger2 DNA MER2_type 7 79 -2639 1671 142 58 7 chr20 36165087 36165362 -30502643 - AluJb SINE Alu -17 295 7 1782 145 40 48 chr20 36165362 36165409 -30502596 + Tigger2 DNA MER2_type 79 125 -2593 2062 134 0 3 chr20 36165409 36165722 -30502283 + AluSx SINE Alu 1 312 0 1782 145 40 48 chr20 36165722 36165951 -30502054 + Tigger2 DNA MER2_type 125 354 -2364 2288 87 0 3 chr20 36165951 36166251 -30501754 - AluSq SINE Alu -14 299 1 4199 113 13 25 chr20 36166251 36166879 -30501126 + Tigger2 DNA MER2_type 1165 1784 -934 2254 86 7 3 chr20 36166885 36167189 -30500816 + AluSc SINE Alu 1 305 -4 1527 178 0 59 chr20 36167195 36167281 -30500724 + AluJb SINE Alu 1 91 -221 2073 116 7 0 chr20 36167281 36167575 -30500430 + AluSq SINE Alu 1 296 -17 1527 178 0 59 chr20 36167575 36167594 -30500411 + AluJb SINE Alu 91 110 -202 6068 115 145 34 chr20 36167594 36168707 -30499298 - MER11B LTR ERVK 0 1236 1 1527 178 0 59 chr20 36168707 36168930 -30499075 + AluJb SINE Alu 110 312 0 6332 112 16 15 chr20 36168930 36169688 -30498317 + Tigger2 DNA MER2_type 1780 2541 -177 3391 124 52 0 chr20 36169688 36170189 -30497816 - MER1A DNA MER1_type 0 527 1 6332 112 16 15 chr20 36170189 36170364 -30497641 + Tigger2 DNA MER2_type 2541 2714 -4 264 278 0 0 chr20 36170426 36170516 -30497489 + L1MC4 LINE L1 6614 6703 -1339 303 178 0 0 chr20 36170517 36170562 -30497443 + L1MC4 LINE L1 6659 6703 -1339 1933 132 7 3 chr20 36170573 36170876 -30497129 - AluJo SINE Alu 0 312 9 365 264 30 94 chr20 36171009 36171156 -30496849 - L1ME3 LINE L1 -508 5658 5544 2179 92 0 23 chr20 36171156 36171462 -30496543 + AluSx SINE Alu 5 303 -9 365 264 30 94 chr20 36171462 36171617 -30496388 - L1ME3 LINE L1 -622 5544 5381 596 282 20 20 chr20 36171642 36171837 -30496168 + L2 LINE L2 3118 3312 -1 2038 125 3 10 chr20 36171940 36172244 -30495761 - AluSx SINE Alu -10 302 1 206 318 0 63 chr20 36172834 36173023 -30494982 + (CTCTG)n Simple_repeat Simple_repeat 3 179 0 2497 56 0 0 chr20 36173656 36173958 -30494047 + AluY SINE Alu 1 302 -9 1894 131 7 3 chr20 36174458 36174764 -30493241 - AluSx SINE Alu 0 307 1 1256 196 96 14 chr20 36176522 36176803 -30491202 + AluJo SINE Alu 6 309 -3 1187 227 21 8 chr20 36177200 36177442 -30490563 - MIR SINE MIR 0 262 18 247 264 160 9 chr20 36177542 36177648 -30490357 + L3 LINE CR1 1450 1571 -6 1718 177 0 3 chr20 36177650 36177949 -30490056 - AluJb SINE Alu -14 298 1 1865 152 0 0 chr20 36178066 36178383 -30489622 + AluJo SINE Alu 2 318 0 2150 108 3 0 chr20 36178811 36179108 -30488897 - AluSp SINE Alu -15 298 1 257 274 249 25 chr20 36179335 36179536 -30488469 - L2 LINE L2 -63 3250 3005 553 211 0 0 chr20 36179566 36179680 -30488325 + FRAM SINE Alu 50 163 -13 546 254 89 44 chr20 36179693 36179941 -30488064 - L2 LINE L2 -609 2705 2447 357 225 0 0 chr20 36179945 36180034 -30487971 + (TATATG)n Simple_repeat Simple_repeat 2 90 0 1841 159 0 10 chr20 36180035 36180344 -30487661 - AluSx SINE Alu -6 306 1 2407 70 0 6 chr20 36180402 36180715 -30487290 - AluY SINE Alu 0 311 1 1103 69 6 91 chr20 36180731 36180906 -30487099 - AluY SINE Alu -151 160 1 406 208 16 104 chr20 36180909 36181034 -30486971 - MIR SINE MIR -115 147 34 392 234 212 18 chr20 36181389 36181667 -30486338 + L1ME4a LINE L1 5790 6121 0 2144 91 7 0 chr20 36181678 36181964 -30486041 + AluSq SINE Alu 1 288 -25 216 0 0 0 chr20 36181966 36181990 -30486015 + (TTAAA)n Simple_repeat Simple_repeat 3 26 0 2270 90 0 0 chr20 36182020 36182320 -30485685 - AluSg SINE Alu -10 300 1 1677 232 61 82 chr20 36182921 36183175 -30484830 - L1ME3 LINE L1 -1 6161 5903 2206 81 3 7 chr20 36183175 36183471 -30484534 - AluSg1 SINE Alu -14 295 1 1677 232 61 82 chr20 36183471 36183552 -30484453 - L1ME3 LINE L1 -259 5903 5822 2231 87 3 0 chr20 36183552 36183841 -30484164 + AluSp SINE Alu 1 290 -23 180 0 0 0 chr20 36183844 36183864 -30484141 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2308 94 0 0 chr20 36183872 36184171 -30483834 + AluSq SINE Alu 1 299 -14 1677 232 61 82 chr20 36184171 36184417 -30483588 - L1ME3 LINE L1 -349 5813 5571 2007 131 0 25 chr20 36184417 36184731 -30483274 + AluSx SINE Alu 1 306 -6 1677 232 61 82 chr20 36184731 36184883 -30483122 - L1ME3 LINE L1 -591 5571 5417 405 170 193 10 chr20 36184941 36184982 -30483023 - L1ME LINE L1 -687 5479 5447 2056 109 0 3 chr20 36184982 36185275 -30482730 - AluSg1 SINE Alu -17 292 1 405 170 193 10 chr20 36185275 36185373 -30482632 - L1ME LINE L1 -719 5447 5321 6291 119 165 9 chr20 36185767 36186873 -30481132 - MER52C LTR ERV1 0 1278 1 1989 117 7 0 chr20 36186914 36187234 -30480771 + AluSx SINE Alu 1 322 0 2355 48 3 0 chr20 36187424 36187717 -30480288 - AluY SINE Alu -17 294 1 872 108 0 31 chr20 36187850 36187980 -30480025 + FLAM_C SINE Alu 1 126 -17 2159 86 4 0 chr20 36187990 36188270 -30479735 + AluSp SINE Alu 1 281 -32 2090 117 10 0 chr20 36188316 36188616 -30479389 + AluSx SINE Alu 1 303 -9 1019 157 23 0 chr20 36188617 36188789 -30479216 + AluJb SINE Alu 137 312 0 1640 167 49 0 chr20 36188792 36189080 -30478925 + AluJo SINE Alu 1 302 -10 2239 93 0 10 chr20 36189173 36189473 -30478532 + AluSx SINE Alu 1 297 -15 414 238 238 49 chr20 36189510 36189556 -30478449 - MIR SINE MIR -10 252 216 2216 81 7 10 chr20 36189556 36189853 -30478152 - AluSq SINE Alu -17 296 1 414 238 238 49 chr20 36189853 36189970 -30478035 - MIR SINE MIR -46 216 58 1455 126 7 63 chr20 36190011 36190281 -30477724 + AluSx SINE Alu 50 304 -8 1783 146 0 0 chr20 36190512 36190792 -30477213 + AluJo SINE Alu 1 280 -32 2213 101 0 0 chr20 36190832 36191129 -30476876 - AluSx SINE Alu -15 297 1 2362 80 0 0 chr20 36191856 36192155 -30475850 - AluY SINE Alu -12 299 1 305 253 25 13 chr20 36192160 36192239 -30475766 - L1ME3A LINE L1 0 6170 6091 252 275 12 38 chr20 36192676 36192756 -30475249 - MIR3 SINE MIR -7 201 124 409 315 172 5 chr20 36193013 36193216 -30474789 - MIR SINE MIR -6 256 20 386 297 84 0 chr20 36193227 36193382 -30474623 - HAL1 LINE L1 -3 2504 2337 1705 174 42 34 chr20 36193388 36193774 -30474231 - L1ME3 LINE L1 -1 6161 5773 1261 141 0 5 chr20 36193777 36193969 -30474036 + AluSx SINE Alu 1 191 -121 2248 80 0 10 chr20 36194011 36194146 -30473859 + AluSp SINE Alu 1 136 -177 2129 98 3 13 chr20 36194146 36194452 -30473553 + AluSg SINE Alu 1 303 -7 2248 80 0 10 chr20 36194452 36194617 -30473388 + AluSp SINE Alu 136 298 -15 610 167 20 0 chr20 36194630 36194732 -30473273 + FLAM_A SINE Alu 3 106 -36 236 215 9 0 chr20 36194814 36194921 -30473084 + (TA)n Simple_repeat Simple_repeat 1 108 0 736 120 9 0 chr20 36195005 36195113 -30472892 + HY1 scRNA scRNA 1 109 -3 29 0 0 0 chr20 36195119 36195148 -30472857 + AT_rich Low_complexity Low_complexity 1 29 0 301 208 104 0 chr20 36195180 36195257 -30472748 + L1MC4a LINE L1 5351 5435 -2373 323 260 73 24 chr20 36195288 36195411 -30472594 + L1MC4a LINE L1 5809 5937 -1871 1772 152 0 7 chr20 36195416 36195718 -30472287 - AluJo SINE Alu -12 300 1 978 176 12 0 chr20 36196236 36196401 -30471604 + FAM SINE Alu 1 167 -8 1585 135 12 8 chr20 36196595 36196839 -30471166 + AluSx SINE Alu 56 300 -12 196 310 28 0 chr20 36196878 36196949 -30471056 - MIR SINE MIR -56 206 134 181 304 89 0 chr20 36196989 36197045 -30470960 - MIR SINE MIR -71 137 77 298 309 0 0 chr20 36197559 36197627 -30470378 - MIR SINE MIR -159 103 36 2223 77 3 0 chr20 36197780 36198066 -30469939 + AluSg SINE Alu 1 287 -23 1800 121 28 24 chr20 36198687 36198977 -30469028 + AluJo SINE Alu 1 291 -21 337 267 113 33 chr20 36199298 36199434 -30468571 - HAL1b LINE L1 -7 1341 1210 921 266 72 20 chr20 36199498 36199573 -30468432 - L1ME3 LINE L1 -330 5791 5721 2013 120 27 7 chr20 36199573 36199872 -30468133 + AluSx SINE Alu 1 305 -7 921 266 72 20 chr20 36199872 36200199 -30467806 - L1ME3 LINE L1 -400 5721 5368 1890 116 53 0 chr20 36201174 36201458 -30466547 + AluSx SINE Alu 12 310 -2 276 274 0 14 chr20 36201570 36201643 -30466362 - L2 LINE L2 -1 3312 3241 214 250 188 42 chr20 36201832 36201976 -30466029 + L2 LINE L2 2603 2767 -547 2523 11 0 0 chr20 36202816 36203137 -30464868 + AluY SINE Alu 1 321 0 2120 104 0 0 chr20 36203451 36203749 -30464256 - AluY SINE Alu -13 298 1 2147 103 0 0 chr20 36203777 36204082 -30463923 + AluSg SINE Alu 1 305 0 332 313 55 8 chr20 36204099 36204227 -30463778 - L1ME4a LINE L1 -22 6099 5966 771 158 0 0 chr20 36204248 36204362 -30463643 + FLAM_C SINE Alu 1 114 -19 1611 154 67 7 chr20 36204436 36204721 -30463284 + AluJo SINE Alu 1 302 -10 1900 114 66 0 chr20 36205262 36205535 -30462470 + AluSq SINE Alu 1 291 -22 574 234 12 96 chr20 36206122 36206175 -30461830 + MER5A DNA MER1_type 21 77 -112 2062 101 20 3 chr20 36206175 36206471 -30461534 - AluSx SINE Alu -11 301 1 574 234 12 96 chr20 36206471 36206584 -30461421 + MER5A DNA MER1_type 77 173 -16 2335 92 0 0 chr20 36207518 36207822 -30460183 - AluSc SINE Alu -5 304 1 541 285 40 0 chr20 36207836 36207987 -30460018 - MIR SINE MIR -93 169 13 2145 106 10 0 chr20 36211252 36211545 -30456460 - AluSq SINE Alu -17 296 1 278 216 114 11 chr20 36212031 36212119 -30455886 - MIR SINE MIR -123 139 43 2441 93 7 0 chr20 36212371 36212672 -30455333 + AluSx SINE Alu 1 303 -9 2358 96 3 37 chr20 36212672 36212994 -30455011 + AluSq SINE Alu 1 311 -2 2405 74 0 3 chr20 36213114 36213412 -30454593 + AluY SINE Alu 3 299 -12 2137 119 26 23 chr20 36213551 36213861 -30454144 - AluSx SINE Alu -1 311 1 1881 159 14 0 chr20 36213862 36214152 -30453853 - AluJo SINE Alu -1 311 18 406 245 168 7 chr20 36214163 36214318 -30453687 - MIR SINE MIR -14 248 69 2212 214 117 80 chr20 36214332 36214680 -30453325 - MER21B LTR ERV1 -33 830 496 778 114 46 38 chr20 36214680 36214811 -30453194 + FLAM_C SINE Alu 1 132 -1 2212 214 117 80 chr20 36214811 36214832 -30453173 - MER21B LTR ERV1 -367 496 477 2585 64 0 0 chr20 36214832 36215128 -30452877 + AluY SINE Alu 1 296 -15 2212 214 117 80 chr20 36215128 36215178 -30452827 - MER21B LTR ERV1 -386 477 430 2204 128 0 0 chr20 36215178 36215476 -30452529 + AluSx SINE Alu 1 298 -14 2212 214 117 80 chr20 36215476 36215844 -30452161 - MER21B LTR ERV1 -433 430 12 221 301 52 72 chr20 36216462 36216490 -30451515 + MER5A DNA MER1_type 1 28 -161 1636 180 27 3 chr20 36216490 36216784 -30451221 + AluJb SINE Alu 12 312 0 221 301 52 72 chr20 36216784 36216908 -30451097 + MER5A DNA MER1_type 28 150 -39 * 818 152 98 0 chr20 36216785 36216949 -30451056 - MER5A DNA MER1_type -9 180 1 577 238 152 0 chr20 36216967 36217118 -30450887 + MER5A DNA MER1_type 10 183 -6 221 368 48 6 chr20 36217120 36217286 -30450719 - MER5B DNA MER1_type 0 178 6 1913 150 3 27 chr20 36218298 36218490 -30449515 - AluJo SINE Alu -19 293 109 189 0 0 0 chr20 36218490 36218511 -30449494 + (TGGGGG)n Simple_repeat Simple_repeat 5 25 0 1913 150 3 27 chr20 36218511 36218618 -30449387 - AluJo SINE Alu -203 109 1 198 0 0 0 chr20 36218785 36218807 -30449198 + (A)n Simple_repeat Simple_repeat 1 22 0 191 213 43 0 chr20 36218889 36218936 -30449069 + L2 LINE L2 3263 3311 -2 446 131 0 24 chr20 36219443 36219527 -30448478 + FLAM_C SINE Alu 53 134 -9 2259 93 0 0 chr20 36219727 36220006 -30447999 - AluSx SINE Alu -33 279 1 215 308 75 17 chr20 36220195 36220315 -30447690 + L2 LINE L2 3137 3263 -9 262 304 116 7 chr20 36220508 36220646 -30447359 - L2 LINE L2 -6 3307 3155 1449 197 7 21 chr20 36220663 36220791 -30447214 + AluJo SINE Alu 1 129 -183 2317 105 3 7 chr20 36220791 36221097 -30446908 + AluSp SINE Alu 1 305 -8 1449 197 7 21 chr20 36221097 36221247 -30446758 + AluJo SINE Alu 129 275 -37 312 158 0 0 chr20 36221363 36221420 -30446585 - MIR SINE MIR -108 154 98 2342 106 0 31 chr20 36221478 36221800 -30446205 - AluSx SINE Alu 0 312 1 661 231 88 16 chr20 36222794 36222863 -30445142 - MER3 DNA MER1_type 0 209 146 2424 62 3 26 chr20 36222863 36223170 -30444835 + AluSq SINE Alu 5 304 -9 661 231 88 16 chr20 36223170 36223282 -30444723 - MER3 DNA MER1_type -63 146 15 1939 143 32 0 chr20 36223371 36223650 -30444355 - AluJb SINE Alu -24 288 1 2432 74 0 26 chr20 36223793 36224104 -30443901 - AluY SINE Alu -8 303 1 2073 129 84 16 chr20 36224218 36224250 -30443755 - MLT2D LTR ERVL -8 406 378 261 0 0 0 chr20 36224250 36224279 -30443726 + (TG)n Simple_repeat Simple_repeat 2 30 0 2073 129 84 16 chr20 36224279 36224530 -30443475 - MLT2D LTR ERVL -36 378 88 2370 94 3 0 chr20 36224530 36224827 -30443178 + AluSq SINE Alu 1 298 -15 2073 129 84 16 chr20 36224827 36224922 -30443083 - MLT2D LTR ERVL -326 88 1 2224 110 0 0 chr20 36225047 36225357 -30442648 + AluSx SINE Alu 1 310 0 2221 99 0 14 chr20 36225498 36225792 -30442213 + AluSg SINE Alu 14 303 -7 1811 121 19 8 chr20 36225792 36226056 -30441949 + AluSx SINE Alu 43 309 -3 2422 86 20 0 chr20 36226181 36226482 -30441523 + AluSg SINE Alu 1 307 -3 2128 99 0 46 chr20 36226702 36227006 -30440999 - AluSx SINE Alu -18 294 5 270 0 0 0 chr20 36227022 36227052 -30440953 + (TA)n Simple_repeat Simple_repeat 2 31 0 1307 107 0 0 chr20 36227052 36227220 -30440785 - AluSp SINE Alu -12 301 134 2900 16 0 12 chr20 36227220 36227540 -30440465 - AluYb8 SINE Alu -2 316 1 440 332 75 44 chr20 36227559 36227854 -30440151 - L2 LINE L2 -32 3240 2937 876 140 21 21 chr20 36228633 36228776 -30439229 + AluJb SINE Alu 89 231 -81 241 204 20 0 chr20 36228779 36228828 -30439177 - Alu SINE Alu -14 288 239 237 65 0 0 chr20 36228859 36228890 -30439115 + (TC)n Simple_repeat Simple_repeat 2 32 0 841 191 13 19 chr20 36229227 36229384 -30438621 + FRAM SINE Alu 1 155 -21 2383 82 14 0 chr20 36229390 36229684 -30438321 + AluSq SINE Alu 1 298 -15 1094 156 0 0 chr20 36230444 36230604 -30437401 + AluJb SINE Alu 141 300 -12 216 304 71 0 chr20 36230802 36230914 -30437091 - MIR3 SINE MIR -22 186 67 197 224 79 13 chr20 36231287 36231363 -30436642 - L2 LINE L2 -188 3084 3004 205 219 0 0 chr20 36231825 36231866 -30436139 - L2 LINE L2 -1 3312 3272 1875 170 0 3 chr20 36232222 36232516 -30435489 + AluJo SINE Alu 1 293 -19 597 256 13 13 chr20 36232974 36233130 -30434875 - MIR SINE MIR -62 200 45 1959 107 6 78 chr20 36233724 36233896 -30434109 - AluSx SINE Alu -15 297 157 2199 120 0 0 chr20 36233896 36234179 -30433826 - AluSx SINE Alu -24 288 6 1959 107 6 78 chr20 36234179 36234325 -30433680 - AluSx SINE Alu -155 157 2 1837 92 4 8 chr20 36234371 36234610 -30433395 + AluSx SINE Alu 61 298 -14 1813 156 0 33 chr20 36234820 36235127 -30432878 + AluJo SINE Alu 1 297 -15 495 204 68 0 chr20 36235138 36235241 -30432764 - MER5B DNA MER1_type -52 126 17 315 220 179 36 chr20 36235241 36235409 -30432596 - MER112 DNA MER1_type -42 218 27 512 286 12 29 chr20 36235451 36235622 -30432383 + MER5A DNA MER1_type 17 184 -5 226 279 190 0 chr20 36236054 36236133 -30431872 - L2 LINE L2 -22 3250 3157 2423 72 16 3 chr20 36236803 36237108 -30430897 - AluY SINE Alu 0 311 3 1677 157 50 4 chr20 36237110 36237261 -30430744 - AluJb SINE Alu -18 294 151 2308 119 0 0 chr20 36237261 36237564 -30430441 - AluSc SINE Alu -6 303 1 1677 157 50 4 chr20 36237564 36237693 -30430312 - AluJb SINE Alu -161 151 1 988 141 0 0 chr20 36237697 36237832 -30430173 - AluSq/x SINE Alu -176 136 2 2028 139 24 0 chr20 36237832 36238126 -30429879 - AluJo SINE Alu -11 301 1 2220 117 3 7 chr20 36238152 36238459 -30429546 + AluSq SINE Alu 1 306 -7 291 241 63 51 chr20 36238581 36238660 -30429345 + L2 LINE L2 3193 3272 0 450 214 180 22 chr20 36239081 36239259 -30428746 - L2 LINE L2 -2 3311 3106 340 271 19 9 chr20 36239519 36239626 -30428379 - L2 LINE L2 -753 2561 2454 755 183 15 0 chr20 36239883 36240014 -30427991 + FLAM_A SINE Alu 1 133 0 1167 243 61 32 chr20 36240111 36240385 -30427620 - L1M4 LINE L1 -1831 4315 4050 2136 118 10 3 chr20 36240385 36240689 -30427316 - AluSx SINE Alu -6 306 1 1167 243 61 32 chr20 36240689 36240733 -30427272 - L1M4 LINE L1 -2096 4050 4009 2323 174 90 6 chr20 36240733 36241199 -30426806 + MLT1D LTR MaLR 1 505 0 1167 243 61 32 chr20 36241199 36241291 -30426714 - L1M4 LINE L1 -2137 4009 3892 1338 101 61 174 chr20 36241293 36241638 -30426367 - AluSg1 SINE Alu -3 306 1 1739 184 0 14 chr20 36241658 36241946 -30426059 - AluJb SINE Alu -28 284 1 27 0 0 0 chr20 36241958 36241985 -30426020 + AT_rich Low_complexity Low_complexity 1 27 0 884 57 0 0 chr20 36242019 36242146 -30425859 - AluSg/x SINE Alu 0 310 185 554 68 0 0 chr20 36242154 36242228 -30425777 + AluSc SINE Alu 219 292 -17 255 384 0 0 chr20 36242456 36242620 -30425385 + (CCA)n Simple_repeat Simple_repeat 3 166 0 2349 106 0 0 chr20 36242808 36243110 -30424895 + AluSg SINE Alu 1 302 -8 2261 100 27 0 chr20 36243267 36243566 -30424439 - AluSg SINE Alu -2 308 2 1140 171 45 67 chr20 36243567 36243744 -30424261 - AluJo SINE Alu -12 300 130 2445 85 0 7 chr20 36243744 36244049 -30423956 + AluY SINE Alu 1 303 -8 1140 171 45 67 chr20 36244049 36244140 -30423865 - AluJo SINE Alu -182 130 38 2344 103 0 0 chr20 36244140 36244432 -30423573 - AluSx SINE Alu -20 292 1 1897 160 23 7 chr20 36244432 36244732 -30423273 - AluSx SINE Alu -7 305 1 2039 129 13 13 chr20 36244741 36245052 -30422953 - AluSp SINE Alu -2 311 1 352 216 0 0 chr20 36245052 36245140 -30422865 - L1M4 LINE L1 -3307 2839 2752 1866 133 0 4 chr20 36245140 36245396 -30422609 + AluSg SINE Alu 1 255 -55 236 123 70 18 chr20 36245441 36245498 -30422507 - L1M4 LINE L1 -3804 2342 2283 2531 65 0 13 chr20 36245499 36245808 -30422197 - AluY SINE Alu -4 307 3 2329 73 3 3 chr20 36245813 36246100 -30421905 - AluSg SINE Alu -23 287 1 1229 142 0 0 chr20 36246112 36246288 -30421717 - AluJb SINE Alu 0 312 137 2159 113 6 29 chr20 36246289 36246600 -30421405 - AluSx SINE Alu -8 304 1 1573 131 14 0 chr20 36246611 36246833 -30421172 - AluSg/x SINE Alu -12 298 74 630 173 107 48 chr20 36246892 36247043 -30420962 + FRAM SINE Alu 1 162 -150 2414 79 0 19 chr20 36247043 36247359 -30420646 + AluSg SINE Alu 1 310 0 630 173 107 48 chr20 36247359 36247375 -30420630 + FRAM SINE Alu 162 176 0 764 243 176 10 chr20 36247595 36247998 -30420007 - L1ME3A LINE L1 -225 5945 5476 245 307 26 18 chr20 36248031 36248145 -30419860 - MIR SINE MIR 0 262 148 2290 111 0 7 chr20 36250442 36250740 -30417265 - AluSx SINE Alu -16 296 1 307 281 47 47 chr20 36252028 36252156 -30415849 - MER5B DNA MER1_type 0 178 51 198 0 0 0 chr20 36252160 36252182 -30415823 + (T)n Simple_repeat Simple_repeat 1 22 0 958 163 23 35 chr20 36252189 36252361 -30415644 - AluJb SINE Alu -142 170 1 1962 144 7 3 chr20 36252385 36252677 -30415328 + AluSx SINE Alu 1 293 -19 1808 179 60 22 chr20 36252677 36252960 -30415045 - L1MB7 LINE L1 -61 6123 5819 2396 64 20 17 chr20 36252960 36253256 -30414749 - AluY SINE Alu -14 297 1 1808 179 60 22 chr20 36253256 36253375 -30414630 - L1MB7 LINE L1 -365 5819 5706 2284 102 0 3 chr20 36253381 36253675 -30414330 - AluSq SINE Alu -20 293 1 2035 102 14 7 chr20 36254136 36254411 -30413594 + AluSq SINE Alu 1 277 -36 816 40 0 0 chr20 36254419 36254519 -30413486 + (TG)n Simple_repeat Simple_repeat 2 101 0 2220 125 0 3 chr20 36254811 36255122 -30412883 + AluSx SINE Alu 1 310 -2 1796 194 0 0 chr20 36255132 36255425 -30412580 + AluJb SINE Alu 2 294 -18 1893 78 122 15 chr20 36256146 36256416 -30411589 + AluSg SINE Alu 1 299 -11 212 235 163 31 chr20 36257132 36257230 -30410775 + MIR SINE MIR 152 262 0 27 29 0 0 chr20 36257732 36257766 -30410239 + GC_rich Low_complexity Low_complexity 1 34 0 217 357 12 0 chr20 36258386 36258470 -30409535 - MIR3 SINE MIR -46 162 78 553 219 82 0 chr20 36258570 36258716 -30409289 + MER5A DNA MER1_type 1 158 -31 189 0 0 0 chr20 36258775 36258796 -30409209 + (T)n Simple_repeat Simple_repeat 1 21 0 1732 102 4 16 chr20 36258801 36259046 -30408959 - AluSq SINE Alu -71 242 1 221 200 0 0 chr20 36259096 36259136 -30408869 - MIR SINE MIR -218 44 5 2264 105 0 16 chr20 36259247 36259562 -30408443 + AluSx SINE Alu 1 310 -2 252 223 40 25 chr20 36259830 36259884 -30408121 + MER4E LTR ERV1 1 53 -571 1527 151 3 108 chr20 36259884 36260056 -30407949 - AluJo SINE Alu -4 298 176 2032 144 0 7 chr20 36260056 36260354 -30407651 - AluSx SINE Alu -12 300 5 1527 151 3 108 chr20 36260354 36260513 -30407492 - AluJo SINE Alu -126 176 2 252 223 40 25 chr20 36260513 36260581 -30407424 + MER4E LTR ERV1 53 208 -416 * 2595 116 32 67 chr20 36260563 36260636 -30407369 + LTR29 LTR ERV1 137 211 -411 2249 68 57 0 chr20 36260636 36260915 -30407090 - AluY SINE Alu -16 295 1 2595 116 32 67 chr20 36260915 36261179 -30406826 + LTR29 LTR ERV1 211 454 -168 2354 107 0 3 chr20 36261179 36261479 -30406526 + AluSp SINE Alu 1 299 -14 2595 116 32 67 chr20 36261479 36261632 -30406373 + LTR29 LTR ERV1 454 611 -11 184 270 104 93 chr20 36261855 36262125 -30405880 - L2 LINE L2 -453 2861 2589 2544 74 0 13 chr20 36262155 36262467 -30405538 - AluSq SINE Alu -5 308 1 2018 144 3 3 chr20 36262494 36262792 -30405213 - AluSx SINE Alu -14 298 1 1821 143 3 49 chr20 36262812 36263119 -30404886 + AluJo SINE Alu 1 293 -19 3705 144 90 11 chr20 36263122 36263759 -30404246 - L1MB3 LINE L1 0 6183 5479 2405 95 0 0 chr20 36263759 36264055 -30403950 - AluSg SINE Alu -14 296 1 3705 144 90 11 chr20 36264055 36264154 -30403851 - L1MB3 LINE L1 -704 5479 5389 2323 94 13 0 chr20 36264185 36264493 -30403512 - AluSx SINE Alu 0 312 1 181 304 0 0 chr20 36265232 36265288 -30402717 - MIR SINE MIR -7 255 200 1956 138 14 0 chr20 36265291 36265588 -30402417 - AluSx SINE Alu -11 301 1 388 315 148 7 chr20 36265887 36266036 -30401969 + MER5A DNA MER1_type 19 188 -1 224 263 0 39 chr20 36266039 36266121 -30401884 + MIR SINE MIR 49 125 -99 490 253 82 14 chr20 36266150 36266296 -30401709 - MIR SINE MIR -61 201 46 180 240 60 0 chr20 36266411 36266461 -30401544 - L2 LINE L2 -65 3248 3196 2246 99 0 0 chr20 36266469 36266772 -30401233 - AluSg SINE Alu -7 303 1 243 0 0 0 chr20 36266864 36266891 -30401114 + (A)n Simple_repeat Simple_repeat 1 27 0 209 125 21 42 chr20 36266945 36266993 -30401012 + L2 LINE L2 3040 3086 -227 1009 120 0 19 chr20 36267012 36267193 -30400812 - AluSg/x SINE Alu 0 306 129 2219 101 0 0 chr20 36267290 36267586 -30400419 + AluSg SINE Alu 1 296 -14 2223 80 7 10 chr20 36267841 36268142 -30399863 - AluSx SINE Alu -12 300 1 189 333 88 0 chr20 36268253 36268367 -30399638 + L3 LINE CR1 1163 1286 -291 25 31 0 0 chr20 36268595 36268627 -30399378 + AT_rich Low_complexity Low_complexity 1 32 0 821 173 8 0 chr20 36268639 36268772 -30399233 - FRAM SINE Alu -35 141 8 2242 95 0 7 chr20 36268838 36269143 -30398862 + AluSc SINE Alu 1 303 -6 504 242 182 61 chr20 36269256 36269487 -30398518 - MLT1K LTR MaLR -30 558 300 1555 108 52 8 chr20 36270612 36270891 -30397114 + AluSg1 SINE Alu 43 309 0 200 227 0 0 chr20 36271246 36271290 -30396715 + A-rich Low_complexity Low_complexity 1 44 0 1687 180 20 0 chr20 36272817 36273111 -30394894 + AluJo SINE Alu 1 300 -12 1045 113 0 0 chr20 36273205 36273346 -30394659 + AluSq SINE Alu 84 224 -89 1565 142 4 11 chr20 36273419 36273680 -30394325 + AluJb SINE Alu 1 259 -53 1817 173 0 0 chr20 36273687 36273982 -30394023 + AluJo SINE Alu 1 295 -17 2316 88 0 0 chr20 36273985 36274281 -30393724 + AluSg SINE Alu 1 296 -14 313 289 55 31 chr20 36274329 36274457 -30393548 - L2 LINE L2 -6 3266 3136 1122 138 29 0 chr20 36275148 36275322 -30392683 + AluSg/x SINE Alu 132 310 0 342 302 78 22 chr20 36275402 36275581 -30392424 - MIR SINE MIR -53 209 21 1944 151 0 16 chr20 36275588 36275893 -30392112 - AluJb SINE Alu -12 300 1 395 250 191 12 chr20 36275893 36276055 -30391950 - MIR SINE MIR -38 224 33 1974 123 3 30 chr20 36276961 36277262 -30390743 - AluSx SINE Alu -19 293 1 190 344 0 0 chr20 36277786 36277850 -30390155 + L2 LINE L2 3193 3256 -16 294 239 23 0 chr20 36278095 36278183 -30389822 + L1MC5 LINE L1 7808 7897 -64 1682 131 131 8 chr20 36278191 36278459 -30389546 - AluSx SINE Alu 0 302 2 2018 123 7 10 chr20 36278459 36278761 -30389244 - AluSp SINE Alu -12 301 1 2085 103 17 0 chr20 36278832 36279123 -30388882 + AluSx SINE Alu 1 296 -16 251 230 40 54 chr20 36279258 36279332 -30388673 - L2 LINE L2 -9 3304 3232 1929 138 3 16 chr20 36279590 36279758 -30388247 - AluSx SINE Alu -11 301 137 2138 129 0 0 chr20 36279758 36280061 -30387944 - AluSx SINE Alu -9 303 1 1929 138 3 16 chr20 36280061 36280197 -30387808 - AluSx SINE Alu -175 137 1 913 203 0 0 chr20 36280197 36280360 -30387645 - FRAM SINE Alu -9 167 5 1359 166 47 22 chr20 36280374 36280682 -30387323 - AluSq SINE Alu 0 315 1 2104 105 7 7 chr20 36281416 36281722 -30386283 - AluSp SINE Alu -7 306 1 2024 138 0 3 chr20 36281747 36282058 -30385947 + AluSx SINE Alu 1 310 -2 2191 82 3 10 chr20 36282540 36282833 -30385172 - AluSp SINE Alu -22 291 1 1893 141 7 13 chr20 36282833 36283139 -30384866 - AluJo SINE Alu -1 311 8 269 219 62 52 chr20 36283178 36283274 -30384731 - MIR SINE MIR -79 183 87 200 312 29 65 chr20 36283806 36283944 -30384061 - MIR SINE MIR -13 249 117 2291 65 0 3 chr20 36284205 36284495 -30383510 + AluSg SINE Alu 1 289 -21 355 200 24 58 chr20 36284567 36284686 -30383319 - MIR SINE MIR -77 131 35 1847 152 7 7 chr20 36285235 36285545 -30382460 - AluSx SINE Alu -2 310 1 472 209 67 36 chr20 36285545 36285683 -30382322 - MIR SINE MIR -44 218 83 811 230 23 17 chr20 36285688 36285862 -30382143 + AluJb SINE Alu 118 292 -20 2295 89 10 0 chr20 36285862 36286165 -30381840 + AluSc SINE Alu 1 306 -3 2033 115 0 36 chr20 36286165 36286496 -30381509 + AluSx SINE Alu 1 320 0 828 200 11 11 chr20 36286496 36286671 -30381334 + AluJo/FRAM SINE Alu 133 307 -5 1574 194 4 0 chr20 36286672 36286950 -30381055 + AluJb SINE Alu 2 280 -32 477 176 101 8 chr20 36286966 36287085 -30380920 + L1MB8 LINE L1 6049 6178 0 230 230 69 35 chr20 36287388 36287475 -30380530 + MIR SINE MIR 58 147 -61 2189 116 3 0 chr20 36287555 36287865 -30380140 - AluSx SINE Alu -1 311 1 240 35 0 0 chr20 36289171 36289200 -30378805 + (GGGGA)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr20 36289215 36289236 -30378769 + GC_rich Low_complexity Low_complexity 1 21 0 38 39 0 0 chr20 36289968 36290020 -30377985 + GC_rich Low_complexity Low_complexity 1 52 0 34 79 0 0 chr20 36290180 36290256 -30377749 + GC_rich Low_complexity Low_complexity 1 76 0 187 243 0 0 chr20 36291379 36291416 -30376589 - MIR SINE MIR -60 148 112 307 302 77 30 chr20 36292017 36292186 -30375819 + L1MC/D LINE L1 5588 5764 -2044 2032 106 3 23 chr20 36292392 36292695 -30375310 - AluSx SINE Alu -2 310 14 2233 98 3 0 chr20 36293077 36293374 -30374631 - AluSq SINE Alu -15 298 1 1824 162 11 8 chr20 36294095 36294565 -30373440 + Tigger1 DNA MER2_type 1 536 -1882 822 149 0 15 chr20 36294574 36294708 -30373297 - FLAM_C SINE Alu -1 132 1 1201 122 0 0 chr20 36294738 36294910 -30373095 + AluSg/x SINE Alu 129 300 -12 1718 145 21 7 chr20 36294916 36295199 -30372806 + AluJo SINE Alu 1 287 -25 887 119 0 8 chr20 36295201 36295335 -30372670 + AluSq/x SINE Alu 1 133 -179 1323 120 56 4 chr20 36295336 36295569 -30372436 + Tigger1 DNA MER2_type 578 822 -1596 2329 90 3 3 chr20 36295581 36295891 -30372114 - AluSx SINE Alu -2 310 1 960 126 0 0 chr20 36295891 36296026 -30371979 - AluSq/x SINE Alu -177 135 1 439 280 97 38 chr20 36296135 36296321 -30371684 - HAL1 LINE L1 -1881 626 430 1603 138 84 0 chr20 36296360 36296621 -30371384 - AluSx SINE Alu -7 305 23 203 264 97 0 chr20 36296623 36296695 -30371310 - MIR SINE MIR -125 137 59 2017 214 20 68 chr20 36296695 36296998 -30371007 - L1M4 LINE L1 -2813 3333 3017 2427 71 0 0 chr20 36296998 36297308 -30370697 - AluY SINE Alu -1 310 1 2017 214 20 68 chr20 36297308 36297344 -30370661 - L1M4 LINE L1 -3129 3017 2981 2077 112 13 19 chr20 36297344 36297658 -30370347 + AluSx SINE Alu 1 312 0 2017 214 20 68 chr20 36297658 36297670 -30370335 - L1M4 LINE L1 -3165 2981 2970 1441 189 42 7 chr20 36297670 36297955 -30370050 + AluJo SINE Alu 1 295 -17 2017 214 20 68 chr20 36297955 36298285 -30369720 - L1M4 LINE L1 -3176 2970 2687 1697 180 17 0 chr20 36298285 36298585 -30369420 + AluJb SINE Alu 3 307 -5 2017 214 20 68 chr20 36298585 36298653 -30369352 - L1M4 LINE L1 -3459 2687 2617 328 217 0 0 chr20 36298779 36298848 -30369157 - L1M4 LINE L1 -3463 2683 2615 325 232 0 0 chr20 36298845 36298914 -30369091 - L1M4 LINE L1 -3463 2683 2615 * 334 203 0 0 chr20 36298911 36298980 -30369025 - L1M4 LINE L1 -3463 2683 2615 334 203 0 0 chr20 36298977 36299046 -30368959 - L1M4 LINE L1 -3463 2683 2615 302 227 0 0 chr20 36299046 36299112 -30368893 - L1M4 LINE L1 -3466 2680 2615 * 324 232 0 0 chr20 36299109 36299178 -30368827 - L1M4 LINE L1 -3463 2683 2615 334 203 0 0 chr20 36299238 36299307 -30368698 - L1M4 LINE L1 -3463 2683 2615 * 349 203 0 0 chr20 36299304 36299373 -30368632 - L1M4 LINE L1 -3463 2683 2615 1002 210 35 25 chr20 36299423 36299709 -30368296 - L1M4 LINE L1 -3473 2673 2385 1876 149 111 25 chr20 36300035 36300397 -30367608 + MSTD LTR MaLR 1 393 -3 1057 144 12 0 chr20 36300922 36301082 -30366923 - AluSg/x SINE Alu -20 292 131 1268 192 16 55 chr20 36301129 36301436 -30366569 - AluJb SINE Alu -14 298 4 1500 183 70 0 chr20 36301838 36302111 -30365894 - AluJb SINE Alu -20 292 1 1178 123 0 0 chr20 36302143 36302305 -30365700 + AluSg/x SINE Alu 135 296 -16 2225 88 3 10 chr20 36302316 36302621 -30365384 - AluSq SINE Alu -10 303 1 1410 249 37 8 chr20 36302746 36303152 -30364853 + L1ME1 LINE L1 5659 6031 -135 2178 113 0 3 chr20 36303156 36303465 -30364540 - AluSg SINE Alu -2 308 1 2264 103 0 22 chr20 36303468 36303787 -30364218 - AluSx SINE Alu 0 312 1 877 149 39 39 chr20 36303790 36303962 -30364043 - AluJb SINE Alu -3 309 135 2043 106 55 0 chr20 36303962 36304254 -30363751 - AluSx SINE Alu -4 308 1 2405 70 0 0 chr20 36304508 36304809 -30363196 - AluY SINE Alu -10 301 1 810 137 15 8 chr20 36304811 36304942 -30363063 - AluJb SINE Alu -179 133 2 718 201 0 22 chr20 36304975 36305109 -30362896 + FLAM_A SINE Alu 1 131 -2 349 279 9 36 chr20 36305603 36305714 -30362291 + MIR SINE MIR 44 151 -111 1744 187 0 0 chr20 36305788 36306098 -30361907 - AluJb SINE Alu -2 310 1 2001 115 28 0 chr20 36306119 36306407 -30361598 - AluSq SINE Alu -17 296 1 1812 121 66 0 chr20 36306407 36306680 -30361325 - AluSx SINE Alu -21 291 1 290 161 32 16 chr20 36307202 36307216 -30360789 - MER46A DNA MER2_type -77 159 145 929 161 65 0 chr20 36307216 36307384 -30360621 + MER46B DNA MER2_type 1 54 -182 1390 134 0 5 chr20 36307385 36307594 -30360411 + AluJb SINE Alu 85 292 -20 2169 92 7 0 chr20 36307700 36307993 -30360012 - AluSp SINE Alu -16 297 3 339 352 82 13 chr20 36308488 36308854 -30359151 - L1ME LINE L1 -355 5809 5406 375 200 0 0 chr20 36308855 36308920 -30359085 - MER2 DNA MER2_type 0 345 281 555 129 24 0 chr20 36308922 36309007 -30358998 + FLAM_A SINE Alu 47 133 -9 2186 111 3 0 chr20 36309012 36309319 -30358686 + AluSp SINE Alu 6 313 0 2144 108 0 0 chr20 36309343 36309655 -30358350 + AluSx SINE Alu 1 312 0 756 154 0 29 chr20 36309702 36309838 -30358167 - AluJo/FRAM SINE Alu -1 311 180 2111 118 0 0 chr20 36309838 36310134 -30357871 - AluSx SINE Alu -16 296 1 2016 123 3 3 chr20 36310519 36310811 -30357194 + AluSx SINE Alu 1 292 -20 760 197 0 23 chr20 36310953 36311085 -30356920 + FLAM_A SINE Alu 1 129 -4 2121 108 19 3 chr20 36311087 36311394 -30356611 + AluSq SINE Alu 1 312 -1 1790 156 10 16 chr20 36311398 36311712 -30356293 + AluJo SINE Alu 1 312 0 504 323 54 51 chr20 36311754 36311795 -30356210 - L1ME LINE L1 -746 5400 5361 2252 80 3 3 chr20 36311795 36312095 -30355910 + AluSc SINE Alu 1 300 -9 504 323 54 51 chr20 36312095 36312366 -30355639 - L1ME LINE L1 -785 5361 5087 430 246 57 16 chr20 36314911 36315033 -30352972 + MIR SINE MIR 23 149 -113 659 225 45 56 chr20 36315935 36316113 -30351892 - MIR SINE MIR -59 203 28 716 237 53 1 chr20 36316226 36316416 -30351589 + MIR SINE MIR 8 208 -18 2028 117 57 0 chr20 36316779 36317061 -30350944 + AluSg SINE Alu 1 298 -12 190 250 138 12 chr20 36317501 36317581 -30350424 + MIR3 SINE MIR 112 201 -7 189 205 0 0 chr20 36317656 36317695 -30350310 + MIR SINE MIR 107 145 -63 2391 68 34 0 chr20 36317733 36318027 -30349978 - AluY SINE Alu -7 304 1 2598 47 0 0 chr20 36318162 36318460 -30349545 - AluY SINE Alu -13 298 1 344 326 95 0 chr20 36318974 36319121 -30348884 + MIR SINE MIR 78 238 -24 21 36 0 0 chr20 36322183 36322211 -30345794 + GC_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr20 36322230 36322266 -30345739 + GC_rich Low_complexity Low_complexity 1 36 0 679 280 143 0 chr20 36322948 36323305 -30344700 - L2 LINE L2 -569 2745 2338 1086 255 64 22 chr20 36323305 36323440 -30344565 - L1MD3 LINE L1 0 8040 7912 224 57 0 29 chr20 36323440 36323475 -30344530 + (CATATA)n Simple_repeat Simple_repeat 1 34 0 1086 255 64 22 chr20 36323475 36323758 -30344247 - L1MD3 LINE L1 -128 7912 7616 300 91 18 0 chr20 36323773 36323828 -30344177 - L1MB3 LINE L1 -1 6182 6127 893 71 0 0 chr20 36323828 36323940 -30344065 - AluY SINE Alu -10 301 190 1657 163 3 25 chr20 36323942 36324262 -30343743 - L1MB3 LINE L1 -50 6133 5821 1561 177 3 53 chr20 36324276 36324429 -30343576 - AluJo SINE Alu -28 284 152 2530 56 0 20 chr20 36324429 36324733 -30343272 - AluY SINE Alu -13 298 1 1561 177 3 53 chr20 36324733 36324878 -30343127 - AluJo SINE Alu -160 152 1 272 148 0 98 chr20 36324878 36324939 -30343066 - AluJb SINE Alu -161 141 87 1438 124 25 106 chr20 36324943 36325265 -30342740 - L1MB3 LINE L1 -362 5821 5526 2155 130 0 3 chr20 36325265 36325566 -30342439 + AluSx SINE Alu 1 300 -12 392 228 106 16 chr20 36325566 36325689 -30342316 - L1MB3 LINE L1 -813 5333 5200 2704 194 44 47 chr20 36325692 36325947 -30342058 - L1MB7 LINE L1 -2 6182 5928 1961 136 38 0 chr20 36325947 36326234 -30341771 - AluSx SINE Alu -14 298 1 2704 194 44 47 chr20 36326234 36326681 -30341324 - L1MB7 LINE L1 -256 5928 5482 632 126 10 10 chr20 36326682 36326785 -30341220 - FLAM_A SINE Alu -18 124 22 2550 175 71 73 chr20 36326800 36326955 -30341050 - L1MB7 LINE L1 -690 5484 5330 2324 109 3 3 chr20 36326955 36327266 -30340739 + AluSq SINE Alu 1 311 -2 2550 175 71 73 chr20 36327266 36327450 -30340555 - L1MB7 LINE L1 -844 5330 5147 2379 106 0 3 chr20 36327450 36327761 -30340244 - AluSg SINE Alu 0 310 1 2550 175 71 73 chr20 36327761 36327888 -30340117 - L1MB7 LINE L1 -1027 5147 5021 2665 64 0 0 chr20 36327888 36328199 -30339806 - AluY SINE Alu 0 311 1 2550 175 71 73 chr20 36328199 36328245 -30339760 - L1MB7 LINE L1 -1153 5021 4976 1782 60 0 0 chr20 36328245 36328487 -30339518 - AluY SINE Alu 0 324 83 2550 175 71 73 chr20 36328487 36328752 -30339253 - L1MB7 LINE L1 -1198 4976 4692 2008 169 0 0 chr20 36328752 36329047 -30338958 - AluJb SINE Alu -17 295 1 2550 175 71 73 chr20 36329047 36329221 -30338784 - L1MB7 LINE L1 -1482 4692 4519 442 166 77 105 chr20 36329227 36329298 -30338707 - L1MC4 LINE L1 -740 7302 7231 1721 106 121 19 chr20 36329298 36329563 -30338442 - AluSx SINE Alu -20 292 1 442 166 77 105 chr20 36329563 36329623 -30338382 - L1MC4 LINE L1 -811 7231 7175 2338 99 0 0 chr20 36329623 36329917 -30338088 - AluSx SINE Alu -18 294 1 442 166 77 105 chr20 36329917 36329965 -30338040 - L1MC4 LINE L1 -867 7175 7127 409 219 138 0 chr20 36329971 36330094 -30337911 - L2 LINE L2 -977 2337 2198 2129 125 3 10 chr20 36330317 36330613 -30337392 - AluSx SINE Alu -18 294 1 193 234 0 0 chr20 36330791 36330838 -30337167 - L2 LINE L2 -5 3308 3262 2539 61 0 16 chr20 36331227 36331537 -30336468 - AluY SINE Alu -6 305 1 478 268 63 142 chr20 36332179 36332314 -30335691 + L1MC4 LINE L1 7436 7580 -462 2321 102 0 9 chr20 36332314 36332629 -30335376 + AluSx SINE Alu 1 312 0 478 268 63 142 chr20 36332629 36332717 -30335288 + L1MC4 LINE L1 7580 7673 -369 2054 141 0 13 chr20 36332717 36333036 -30334969 + AluJb SINE Alu 1 315 0 478 268 63 142 chr20 36333036 36333430 -30334575 + L1MC4 LINE L1 7673 8006 -36 2148 72 76 3 chr20 36334064 36334355 -30333650 + AluSx SINE Alu 1 312 0 587 170 31 37 chr20 36335032 36335194 -30332811 - MIR SINE MIR -50 212 49 2632 58 3 0 chr20 36338429 36338739 -30329266 - AluY SINE Alu 0 311 1 2266 78 7 27 chr20 36338760 36339054 -30328951 - AluSp SINE Alu -25 288 1 21 0 0 0 chr20 36339061 36339082 -30328923 + AT_rich Low_complexity Low_complexity 1 21 0 343 320 164 41 chr20 36339640 36339715 -30328290 + L1 LINE L1 3364 3428 -2718 1962 134 17 7 chr20 36339715 36340005 -30328000 + AluSx SINE Alu 1 293 -19 343 320 164 41 chr20 36340005 36340344 -30327661 + L1 LINE L1 3428 3829 -2317 332 109 18 0 chr20 36340378 36340433 -30327572 + Alu SINE Alu 2 47 -254 631 174 208 20 chr20 36340433 36340582 -30327423 + AluSg/x SINE Alu 110 286 -23 968 197 80 11 chr20 36340609 36340797 -30327208 + AluJb SINE Alu 78 278 -34 1813 121 16 4 chr20 36340900 36341156 -30326849 + AluSg SINE Alu 41 299 -11 1845 158 0 30 chr20 36341219 36341522 -30326483 + AluJo SINE Alu 5 298 -14 864 106 0 45 chr20 36342422 36342554 -30325451 + AluSq/x SINE Alu 8 133 -179 2037 117 46 0 chr20 36342556 36342837 -30325168 + AluSx SINE Alu 1 294 -18 2024 168 73 88 chr20 36342837 36343029 -30324976 + L1M3 LINE L1 5035 5228 -952 2077 133 3 7 chr20 36343029 36343323 -30324682 + AluSx SINE Alu 1 293 -19 2024 168 73 88 chr20 36343323 36343594 -30324411 + L1M3 LINE L1 5228 5501 -679 1634 167 4 25 chr20 36343594 36343869 -30324136 + AluJo SINE Alu 14 282 -30 207 0 0 0 chr20 36343872 36343895 -30324110 + (CAAA)n Simple_repeat Simple_repeat 3 25 0 2024 168 73 88 chr20 36343895 36344227 -30323778 + L1M3 LINE L1 5503 5792 -388 479 253 176 47 chr20 36344250 36344386 -30323619 + L1M4 LINE L1 2651 2768 -3378 1612 167 0 60 chr20 36344386 36344546 -30323459 - AluJb SINE Alu -20 292 157 2408 82 0 3 chr20 36344546 36344840 -30323165 - AluSg SINE Alu -17 293 1 1612 167 0 60 chr20 36344840 36344979 -30323026 - AluJb SINE Alu -155 157 11 479 253 176 47 chr20 36344979 36345292 -30322713 + L1M4 LINE L1 2768 3158 -2988 2015 115 20 20 chr20 36345436 36345731 -30322274 - AluSq SINE Alu -17 296 2 449 269 110 13 chr20 36345745 36345972 -30322033 + L1M4 LINE L1 3589 3837 -2309 1606 104 0 0 chr20 36346109 36346310 -30321695 + AluSx SINE Alu 1 201 -111 2076 103 7 0 chr20 36346310 36346579 -30321426 - AluSq SINE Alu -40 273 1 609 144 93 36 chr20 36346611 36346750 -30321255 + AluY SINE Alu 2 148 -163 803 153 0 0 chr20 36346756 36346867 -30321138 - AluJb SINE Alu -201 111 1 2337 101 7 3 chr20 36346984 36347291 -30320714 - AluSx SINE Alu -4 308 1 468 222 52 44 chr20 36347460 36347594 -30320411 + MLT1J LTR MaLR 31 188 -297 809 178 7 0 chr20 36347951 36348086 -30319919 + AluJo SINE Alu 1 136 -176 308 284 126 26 chr20 36348163 36348511 -30319494 + L1ME LINE L1 2154 2536 -3610 1692 251 212 56 chr20 36348646 36348962 -30319043 + L2 LINE L2 1295 1560 -1754 1766 171 7 17 chr20 36348962 36349254 -30318751 + AluJo SINE Alu 1 289 -23 1692 251 212 56 chr20 36349254 36350093 -30317912 + L2 LINE L2 1560 2721 -593 2995 9 0 0 chr20 36350093 36350409 -30317596 - AluYb8 SINE Alu -2 316 1 1692 251 212 56 chr20 36350409 36350500 -30317505 + L2 LINE L2 2721 2796 -518 1338 156 121 0 chr20 36350505 36350736 -30317269 + AluJb SINE Alu 54 312 0 1017 276 115 26 chr20 36350745 36351225 -30316780 + L2 LINE L2 2792 3311 -2 2521 83 0 0 chr20 36351326 36351628 -30316377 + AluY SINE Alu 1 302 -9 441 280 40 98 chr20 36351710 36351784 -30316221 + L1ME LINE L1 4290 4367 -1779 2261 120 0 0 chr20 36351784 36352083 -30315922 - AluSx SINE Alu -13 299 1 441 280 40 98 chr20 36352083 36352172 -30315833 + L1ME LINE L1 4367 4460 -1686 1870 180 0 3 chr20 36352172 36352461 -30315544 + AluJo SINE Alu 1 288 -24 441 280 40 98 chr20 36352461 36352818 -30315187 + L1ME LINE L1 4460 4781 -1365 1396 122 0 51 chr20 36352819 36353033 -30314972 + AluSx SINE Alu 1 203 -109 510 117 0 0 chr20 36353033 36353110 -30314895 + AluSg/x SINE Alu 67 143 -167 2078 140 10 3 chr20 36353111 36353419 -30314586 + AluSx SINE Alu 1 310 -2 2154 89 71 0 chr20 36353539 36353820 -30314185 + AluSp SINE Alu 1 301 -12 402 316 82 45 chr20 36353871 36353913 -30314092 + L1ME LINE L1 5258 5297 -873 1664 181 0 52 chr20 36353913 36354075 -30313930 - AluJo SINE Alu -17 295 155 2464 93 0 0 chr20 36354075 36354387 -30313618 - AluSx SINE Alu 0 312 1 1664 181 0 52 chr20 36354387 36354533 -30313472 - AluJo SINE Alu -157 155 3 402 316 82 45 chr20 36354533 36354954 -30313051 + L1ME LINE L1 5297 5744 -426 2502 73 7 3 chr20 36354954 36355256 -30312749 + AluSp SINE Alu 7 309 -4 402 316 82 45 chr20 36355256 36355301 -30312704 + L1ME LINE L1 5744 5786 -384 1628 254 91 26 chr20 36355430 36355996 -30312009 + MLT1G LTR MaLR 1 570 -20 189 290 200 10 chr20 36355996 36356096 -30311909 + L2 LINE L2 2917 3035 -237 2261 109 0 0 chr20 36356148 36356462 -30311543 + AluSx SINE Alu 1 314 0 2648 137 39 2 chr20 36356563 36357024 -30310981 + L1MB3 LINE L1 5706 6183 0 805 187 53 0 chr20 36357499 36357670 -30310335 + MER33 DNA MER1_type 1 180 -144 911 152 20 81 chr20 36357671 36357868 -30310137 + Tigger2a DNA MER2_type 1 185 -249 2069 143 0 13 chr20 36357868 36358183 -30309822 - AluJo SINE Alu -1 311 1 3569 153 135 26 chr20 36358333 36358389 -30309616 + L1MB4 LINE L1 5111 5160 -1020 2345 100 0 3 chr20 36358389 36358688 -30309317 + AluSg SINE Alu 1 298 -12 3569 153 135 26 chr20 36358688 36359599 -30308406 + L1MB4 LINE L1 5160 6178 -2 406 286 101 3 chr20 36359591 36359878 -30308127 + L1PA16 LINE L1 5592 5906 -260 * 2419 140 70 45 chr20 36359637 36359881 -30308124 + L1MB7 LINE L1 5650 5886 -298 2526 60 0 25 chr20 36359881 36360196 -30307809 + AluY SINE Alu 1 307 -4 2419 140 70 45 chr20 36360196 36360464 -30307541 + L1MB7 LINE L1 5886 6175 -9 2370 99 7 3 chr20 36360651 36360954 -30307051 + AluSx SINE Alu 1 304 -8 21 57 0 0 chr20 36360980 36361015 -30306990 + AT_rich Low_complexity Low_complexity 1 35 0 1741 175 0 10 chr20 36361026 36361317 -30306688 + AluJo SINE Alu 3 290 -22 510 256 109 44 chr20 36361374 36361694 -30306311 + HAL1 LINE L1 2044 2384 -123 188 164 0 127 chr20 36362272 36362310 -30305695 + L2 LINE L2 3223 3254 -18 2436 90 0 3 chr20 36362310 36362611 -30305394 + AluSx SINE Alu 1 300 -12 188 164 0 127 chr20 36362611 36362627 -30305378 + L2 LINE L2 3254 3270 -2 578 299 55 14 chr20 36362640 36362857 -30305148 - MIR SINE MIR -26 236 11 237 292 0 0 chr20 36363909 36363974 -30304031 + GA-rich Low_complexity Low_complexity 5 69 0 243 88 0 0 chr20 36364284 36364318 -30303687 + (CGGG)n Simple_repeat Simple_repeat 3 36 0 2181 92 3 0 chr20 36367504 36367832 -30300173 + AluSp SINE Alu 1 329 0 421 148 99 12 chr20 36368381 36368495 -30299510 + L1MD2 LINE L1 5432 5559 -597 1262 122 5 0 chr20 36368503 36368691 -30299314 + AluSq SINE Alu 120 308 -5 862 150 8 0 chr20 36368711 36368844 -30299161 - AluJo SINE Alu -178 134 1 1790 150 86 48 chr20 36368844 36369264 -30298741 + L1MD2 LINE L1 5924 6359 0 379 312 78 7 chr20 36369782 36369936 -30298069 - MIR SINE MIR -31 231 67 216 0 0 0 chr20 36369996 36370020 -30297985 + (GGCTG)n Simple_repeat Simple_repeat 1 24 0 252 220 0 34 chr20 36370444 36370503 -30297502 + MIR SINE MIR 34 90 -172 206 203 51 38 chr20 36371539 36371618 -30296387 + L2 LINE L2 2907 2986 -327 1960 88 56 52 chr20 36372458 36372763 -30295242 - AluSg SINE Alu -4 306 1 2126 117 10 0 chr20 36373518 36373826 -30294179 + AluSx SINE Alu 1 311 -1 2410 206 135 19 chr20 36374384 36374804 -30293201 - MER82 DNA MER2_type 0 653 145 2037 103 35 7 chr20 36374804 36375094 -30292911 + AluSq SINE Alu 1 298 -15 2410 206 135 19 chr20 36375094 36375257 -30292748 - MER82 DNA MER2_type -508 145 2 230 333 102 34 chr20 36375268 36375415 -30292590 - MIR SINE MIR -66 196 40 2472 61 0 0 chr20 36375458 36375755 -30292250 - AluSg SINE Alu -12 298 2 772 262 137 61 chr20 36376699 36376764 -30291241 + L2 LINE L2 2698 2757 -556 2084 110 0 3 chr20 36376764 36377056 -30290949 + AluSq SINE Alu 1 291 -22 772 262 137 61 chr20 36377056 36377555 -30290450 + L2 LINE L2 2757 3312 -1 209 350 0 48 chr20 36377558 36377661 -30290344 - MIR SINE MIR -115 147 50 262 326 35 21 chr20 36378008 36378152 -30289853 + MIR3 SINE MIR 7 152 -56 248 194 134 15 chr20 36378211 36378278 -30289727 - Charlie8 DNA MER1_type -2226 191 117 918 138 28 28 chr20 36378282 36378306 -30289699 + L1MA4 LINE L1 6116 6139 -161 1526 132 128 0 chr20 36378306 36378572 -30289433 - AluJo SINE Alu -12 300 1 918 138 28 28 chr20 36378572 36378728 -30289277 + L1MA4 LINE L1 6138 6296 -4 369 277 59 17 chr20 36379524 36379643 -30288362 - MIR SINE MIR -126 136 13 2112 138 0 0 chr20 36380704 36381016 -30286989 + AluSx SINE Alu 1 312 0 187 326 139 0 chr20 36382002 36382088 -30285917 - L2 LINE L2 -41 3272 3175 541 249 96 74 chr20 36382242 36382471 -30285534 + L3 LINE CR1 1178 1411 -166 1725 163 14 3 chr20 36382664 36382953 -30285052 - AluJo SINE Alu -20 292 1 1703 156 7 24 chr20 36382956 36383244 -30284761 - AluJo SINE Alu -20 292 10 213 184 20 20 chr20 36383560 36383609 -30284396 + MIR SINE MIR 102 150 -112 196 232 258 32 chr20 36383944 36384134 -30283871 + L2 LINE L2 2832 3064 -208 229 356 106 0 chr20 36384787 36384891 -30283114 - MIR SINE MIR -72 190 76 188 276 69 0 chr20 36385290 36385348 -30282657 + MIR3 SINE MIR 99 160 -48 424 272 139 6 chr20 36385349 36385522 -30282483 + MER117 DNA MER1_type 2 197 0 288 300 39 1 chr20 36385756 36385854 -30282151 + MIR SINE MIR 42 144 -77 263 275 0 0 chr20 36385980 36386049 -30281956 - MIR SINE MIR -63 145 77 2153 102 20 0 chr20 36386283 36386586 -30281419 + AluSx SINE Alu 3 311 -1 2106 97 50 7 chr20 36386683 36386983 -30281022 + AluSp SINE Alu 1 313 0 1059 162 19 19 chr20 36387000 36387047 -30280958 + L1MB3 LINE L1 5925 5971 -212 2193 107 0 3 chr20 36387047 36387357 -30280648 + AluSx SINE Alu 1 309 -3 1059 162 19 19 chr20 36387357 36387525 -30280480 + L1MB3 LINE L1 5970 6140 -43 2162 73 38 0 chr20 36387527 36387815 -30280190 + AluSx SINE Alu 1 299 -13 2173 105 3 0 chr20 36388167 36388463 -30279542 + AluSg SINE Alu 1 297 -13 204 330 117 35 chr20 36388609 36388839 -30279166 + L2 LINE L2 3026 3274 -39 789 268 56 9 chr20 36389548 36389779 -30278226 - MIR SINE MIR -6 256 15 729 177 8 24 chr20 36389927 36390051 -30277954 + FLAM_C SINE Alu 2 123 -20 280 315 45 9 chr20 36390282 36390393 -30277612 - MIR SINE MIR -71 137 23 253 277 24 122 chr20 36390974 36391144 -30276861 + MIR3 SINE MIR 1 157 -51 1941 155 7 3 chr20 36391153 36391456 -30276549 - AluJb SINE Alu -8 304 1 2094 94 0 24 chr20 36392153 36392468 -30275537 - AluSg SINE Alu 0 309 2 455 355 47 22 chr20 36392614 36392975 -30275030 + L1MC4a LINE L1 5568 5937 -1871 232 309 154 18 chr20 36393545 36393655 -30274350 + MIR3 SINE MIR 78 202 -6 2394 87 0 0 chr20 36393894 36394205 -30273800 - AluSx SINE Alu -1 311 1 370 267 17 67 chr20 36394409 36394529 -30273476 + L2 LINE L2 3155 3268 -4 316 295 23 39 chr20 36394541 36394670 -30273335 + MIR SINE MIR 85 211 -51 319 347 32 0 chr20 36395764 36395888 -30272117 + MIR SINE MIR 124 251 -11 210 328 61 44 chr20 36396405 36396585 -30271420 + L2 LINE L2 3089 3271 -42 1080 66 18 0 chr20 36396596 36396763 -30271242 + (GA)n Simple_repeat Simple_repeat 1 170 0 232 348 80 0 chr20 36397368 36397480 -30270525 - MIR SINE MIR -109 153 33 220 355 0 41 chr20 36397483 36397604 -30270401 + MER5A DNA MER1_type 7 122 -67 326 216 10 72 chr20 36397626 36397723 -30270282 - MIR SINE MIR -66 142 52 247 262 41 57 chr20 36398201 36398323 -30269682 + MIR SINE MIR 29 148 -60 388 276 138 38 chr20 36398586 36398796 -30269209 - MIR SINE MIR -11 251 21 2236 109 0 0 chr20 36398805 36399108 -30268897 - AluSq SINE Alu -10 303 1 1659 153 0 35 chr20 36399108 36399390 -30268615 - AluJb SINE Alu -32 280 9 256 272 100 5 chr20 36399444 36399556 -30268449 - MIR SINE MIR -63 145 26 251 213 53 64 chr20 36399756 36399850 -30268155 + MIR3 SINE MIR 109 201 -7 248 254 27 55 chr20 36400194 36400304 -30267701 + MIR SINE MIR 21 127 -81 478 256 82 36 chr20 36400309 36400504 -30267501 - MIR SINE MIR -37 225 22 216 241 24 48 chr20 36400970 36401053 -30266952 + (CCCCAG)n Simple_repeat Simple_repeat 1 81 0 309 155 0 0 chr20 36401893 36401951 -30266054 + (CGGA)n Simple_repeat Simple_repeat 2 59 0 25 65 0 0 chr20 36402204 36402250 -30265755 + GC_rich Low_complexity Low_complexity 1 46 0 336 286 9 47 chr20 36402581 36402723 -30265282 + MIR SINE MIR 37 171 -64 186 235 132 0 chr20 36402924 36402992 -30265013 + MIR SINE MIR 77 153 -109 864 78 35 0 chr20 36403201 36403316 -30264689 - FLAM_C SINE Alu -12 131 13 264 281 0 11 chr20 36403422 36403514 -30264491 + MIR SINE MIR 60 149 -71 2264 83 3 0 chr20 36403605 36403895 -30264110 + AluSp SINE Alu 1 291 -22 1319 161 4 9 chr20 36403915 36404145 -30263860 + AluJo SINE Alu 82 310 -2 498 253 45 0 chr20 36404576 36404730 -30263275 + L2 LINE L2 2462 2622 -692 1400 112 29 0 chr20 36404784 36404990 -30263015 - AluSc SINE Alu 0 309 98 887 66 0 0 chr20 36404990 36405096 -30262909 + AluSq/x SINE Alu 6 111 -202 367 106 0 15 chr20 36405097 36405163 -30262842 + AluSp/q SINE Alu 239 303 0 895 86 0 0 chr20 36405166 36405283 -30262722 - AluSq/x SINE Alu -195 117 1 516 241 160 26 chr20 36405284 36405580 -30262425 + L2 LINE L2 2689 3024 -289 953 96 52 0 chr20 36405581 36405717 -30262288 + AluSq/x SINE Alu 3 145 -167 2063 87 0 11 chr20 36405717 36405831 -30262174 + AluY SINE Alu 21 135 -176 2092 85 51 20 chr20 36405831 36406126 -30261879 + AluSq SINE Alu 1 304 -9 2063 87 0 11 chr20 36406126 36406287 -30261718 + AluY SINE Alu 135 293 -18 426 356 71 7 chr20 36406287 36406568 -30261437 + L2 LINE L2 3013 3311 -2 242 279 279 0 chr20 36407414 36407536 -30260469 - MER117 DNA MER1_type -41 156 1 203 364 27 0 chr20 36407818 36407928 -30260077 - MIR3 SINE MIR -14 194 82 272 299 0 11 chr20 36408157 36408244 -30259761 + GA-rich Low_complexity Low_complexity 4 89 0 185 204 34 23 chr20 36408286 36408374 -30259631 + GA-rich Low_complexity Low_complexity 1 89 0 424 245 0 72 chr20 36409021 36409160 -30258845 + MER91B DNA MER1_type 1 129 -61 227 215 0 46 chr20 36409180 36409227 -30258778 + MER91B DNA MER1_type 94 139 -51 2192 88 41 0 chr20 36409227 36409521 -30258484 - AluSx SINE Alu -4 308 3 227 215 0 46 chr20 36409521 36409538 -30258467 + MER91B DNA MER1_type 139 155 -35 2351 99 0 0 chr20 36409548 36409861 -30258144 - AluSq SINE Alu 0 313 1 1639 159 60 0 chr20 36409861 36410144 -30257861 - AluJb SINE Alu -12 300 1 312 149 0 60 chr20 36410144 36410199 -30257806 - Alu SINE Alu -7 295 240 568 152 191 0 chr20 36410212 36410317 -30257688 - FLAM_C SINE Alu -17 126 2 2340 97 0 0 chr20 36410379 36410687 -30257318 + AluSx SINE Alu 1 308 -4 1894 153 20 0 chr20 36410702 36410996 -30257009 + AluSx SINE Alu 1 300 -12 1722 179 0 3 chr20 36411032 36411328 -30256677 + AluJo SINE Alu 1 295 -17 2094 101 24 0 chr20 36411457 36411745 -30256260 + AluSp SINE Alu 6 300 -13 2159 82 0 7 chr20 36411861 36412143 -30255862 + AluSx SINE Alu 1 280 -32 180 0 0 0 chr20 36412143 36412163 -30255842 + (CAAT)n Simple_repeat Simple_repeat 4 23 0 2229 99 0 0 chr20 36413000 36413292 -30254713 - AluSq SINE Alu -17 296 5 512 222 96 133 chr20 36413297 36413711 -30254294 + MLT1H LTR MaLR 24 409 0 2109 128 0 0 chr20 36414564 36414860 -30253145 - AluSx SINE Alu -16 296 1 300 409 30 0 chr20 36414911 36415075 -30252930 - MIR SINE MIR 0 262 94 1564 189 20 0 chr20 36415136 36415438 -30252567 - AluJb SINE Alu -4 308 1 1352 74 42 44 chr20 36415492 36415721 -30252284 - L1PA8 LINE L1 -62 6107 5872 2059 153 3 0 chr20 36415791 36416085 -30251920 + AluSx SINE Alu 1 295 -17 263 151 0 57 chr20 36416997 36417050 -30250955 + MIR3 SINE MIR 108 157 -51 330 348 18 0 chr20 36417098 36417210 -30250795 + MER117 DNA MER1_type 81 194 -3 345 303 10 0 chr20 36417212 36417311 -30250694 - MIR3 SINE MIR -51 157 58 264 224 61 41 chr20 36417802 36417900 -30250105 + MIR SINE MIR 46 145 -63 2483 78 0 0 chr20 36417993 36418288 -30249717 - AluSg SINE Alu -15 295 1 321 231 0 0 chr20 36418292 36418357 -30249648 - MER3 DNA MER1_type 0 209 145 1029 144 125 43 chr20 36418357 36418565 -30249440 + AluJo SINE Alu 86 310 -2 2069 135 3 0 chr20 36418574 36418862 -30249143 + AluSx SINE Alu 3 291 -21 615 174 77 71 chr20 36418868 36418935 -30249070 - MER3 DNA MER1_type -6 156 91 2008 136 30 3 chr20 36418935 36419230 -30248775 + AluJb SINE Alu 1 303 -9 615 174 77 71 chr20 36419230 36419317 -30248688 - MER3 DNA MER1_type -71 91 1 750 285 42 0 chr20 36419476 36419690 -30248315 + MIR SINE MIR 25 247 -15 248 308 22 22 chr20 36419797 36419888 -30248117 - MIR SINE MIR -15 247 157 255 237 54 11 chr20 36420000 36420093 -30247912 + MIR SINE MIR 27 123 -85 248 258 0 15 chr20 36420481 36420547 -30247458 - MIR3 SINE MIR -43 165 101 2428 92 3 0 chr20 36421018 36421321 -30246684 + AluSp SINE Alu 1 304 -9 341 264 7 29 chr20 36421677 36421817 -30246188 + (CAGAGA)n Simple_repeat Simple_repeat 2 138 0 1135 284 107 16 chr20 36421852 36422445 -30245560 - L2 LINE L2 -3 3310 2655 384 279 97 19 chr20 36422839 36422993 -30245012 + MIR SINE MIR 32 197 -65 406 302 81 0 chr20 36423149 36423344 -30244661 - MIR SINE MIR 0 262 43 474 262 97 44 chr20 36424206 36424412 -30243593 + MIR SINE MIR 46 262 0 341 260 13 0 chr20 36424515 36424592 -30243413 - MIR3 SINE MIR -8 200 123 1175 79 0 4 chr20 36424594 36424808 -30243197 + AluSx SINE Alu 2 305 -7 803 186 0 0 chr20 36424820 36424949 -30243056 + AluJ SINE Alu 1 129 -183 204 182 167 0 chr20 36424962 36425028 -30242977 - MIR SINE MIR -66 142 66 284 70 23 0 chr20 36425089 36425132 -30242873 + (TA)n Simple_repeat Simple_repeat 2 45 0 2056 139 7 0 chr20 36425132 36425420 -30242585 - AluSx SINE Alu -22 290 1 964 153 25 31 chr20 36425420 36425583 -30242422 + AluJ SINE Alu 118 279 -33 2524 71 3 0 chr20 36426668 36426976 -30241029 - AluSx SINE Alu -2 310 2 242 341 87 0 chr20 36427873 36427999 -30240006 - MIR3 SINE MIR -29 179 43 2163 128 3 0 chr20 36429269 36429565 -30238440 + AluSq SINE Alu 1 297 -16 2161 100 23 23 chr20 36429567 36429866 -30238139 + AluSq SINE Alu 2 300 -13 286 237 114 38 chr20 36429958 36430089 -30237916 - L3 LINE CR1 -216 1361 1221 352 333 35 0 chr20 36430351 36430465 -30237540 - L2 LINE L2 -17 3255 3138 205 170 94 0 chr20 36430660 36430713 -30237292 - MIR SINE MIR -60 148 91 1654 269 103 40 chr20 36431966 36432537 -30235468 - MER115 DNA AcHobo -1 692 158 2435 106 0 0 chr20 36432537 36432839 -30235166 - AluSx SINE Alu -10 302 1 510 213 39 16 chr20 36432846 36432973 -30235032 - FLAM_C SINE Alu 0 133 4 1654 269 103 40 chr20 36432973 36433044 -30234961 - MER115 DNA AcHobo -540 153 1 215 167 0 0 chr20 36433316 36433352 -30234653 + MIR SINE MIR 113 148 -114 255 195 38 16 chr20 36433502 36433594 -30234411 - L2 LINE L2 -355 2917 2828 1089 166 237 76 chr20 36433635 36433805 -30234200 + MLT1D LTR MaLR 1 142 -363 2161 127 6 13 chr20 36433805 36434119 -30233886 + AluSx SINE Alu 1 312 0 1089 166 237 76 chr20 36434119 36434133 -30233872 + MLT1D LTR MaLR 142 152 -353 2141 113 7 3 chr20 36434133 36434443 -30233562 + AluSx SINE Alu 1 311 0 1089 166 237 76 chr20 36434443 36434552 -30233453 + MLT1D LTR MaLR 152 242 -263 819 142 0 0 chr20 36434552 36434679 -30233326 + FLAM_C SINE Alu 1 127 -6 1089 166 237 76 chr20 36434679 36434749 -30233256 + MLT1D LTR MaLR 242 426 -79 190 211 0 26 chr20 36434801 36434839 -30233166 - MIR SINE MIR -138 70 34 783 115 96 25 chr20 36435155 36435312 -30232693 + MER3 DNA MER1_type 42 209 0 2277 118 0 3 chr20 36435538 36435851 -30232154 - AluSx SINE Alu 0 312 1 620 169 42 0 chr20 36435871 36435989 -30232016 - L1MB5 LINE L1 -6 6168 6046 234 91 0 0 chr20 36435989 36436022 -30231983 + (TTCC)n Simple_repeat Simple_repeat 1 33 0 2114 128 7 3 chr20 36436025 36436315 -30231690 - AluSg SINE Alu -19 291 1 1739 147 30 47 chr20 36436317 36436616 -30231389 - AluJo SINE Alu -18 294 1 526 194 0 32 chr20 36436620 36436744 -30231261 - L1MB5 LINE L1 -117 6057 5938 4861 144 12 45 chr20 36436759 36436965 -30231040 - L1MB4 LINE L1 -2 6178 5967 2206 112 3 26 chr20 36436965 36437277 -30230728 - AluSx SINE Alu -6 306 2 4861 144 12 45 chr20 36437277 36437670 -30230335 - L1MB4 LINE L1 -213 5967 5622 2224 97 10 3 chr20 36437670 36437968 -30230037 - AluSg SINE Alu -10 300 1 4861 144 12 45 chr20 36437968 36438369 -30229636 - L1MB4 LINE L1 -558 5622 5209 1742 146 0 0 chr20 36438533 36438786 -30229219 + AluSx SINE Alu 58 310 -2 306 293 61 20 chr20 36438883 36439030 -30228975 + LTR16A1 LTR ERVL 1 153 -304 273 211 184 53 chr20 36439032 36439146 -30228859 + L2 LINE L2 2273 2401 -913 1116 236 72 4 chr20 36439146 36439422 -30228583 + LTR16A LTR ERVL 151 445 -5 269 300 63 18 chr20 36439422 36439534 -30228471 + MIR SINE MIR 38 153 -62 2068 97 8 0 chr20 36439544 36439812 -30228193 - AluSx SINE Alu -22 290 21 2302 102 20 0 chr20 36440028 36440332 -30227673 - AluSx SINE Alu -2 310 1 327 325 17 8 chr20 36440333 36440450 -30227555 + MIR3 SINE MIR 48 165 -43 284 330 10 0 chr20 36441127 36441224 -30226781 + L3 LINE CR1 956 1053 -524 1244 254 102 18 chr20 36441479 36441987 -30226018 + L2 LINE L2 2068 2618 -696 2175 122 7 7 chr20 36442034 36442338 -30225667 - AluSx SINE Alu -8 304 1 1823 153 3 36 chr20 36442358 36442522 -30225483 - AluJb SINE Alu -21 291 140 2412 81 3 3 chr20 36442522 36442820 -30225185 - AluSp SINE Alu -15 298 1 1823 153 3 36 chr20 36442820 36442956 -30225049 - AluJb SINE Alu -172 140 1 447 310 146 0 chr20 36442976 36443202 -30224803 + L2 LINE L2 2827 3085 -228 307 191 176 0 chr20 36443457 36443525 -30224480 - MIR SINE MIR -14 248 169 2172 175 73 64 chr20 36443552 36444083 -30223922 + MLT1F LTR MaLR 3 538 -4 1889 158 13 28 chr20 36444084 36444401 -30223604 + AluJo SINE Alu 1 312 0 2476 48 41 3 chr20 36444987 36445280 -30222725 - AluY SINE Alu -7 304 1 879 105 0 0 chr20 36445280 36445394 -30222611 - AluY SINE Alu -197 114 1 2387 95 0 0 chr20 36445449 36445753 -30222252 - AluSg SINE Alu -6 304 1 2259 103 0 35 chr20 36445754 36446066 -30221939 - AluSx SINE Alu 0 312 12 2316 117 0 0 chr20 36446079 36446378 -30221627 - AluSx SINE Alu -13 299 1 834 132 7 56 chr20 36446405 36446549 -30221456 - AluSp/q SINE Alu -19 294 158 1790 141 58 4 chr20 36446649 36446926 -30221079 - AluSg SINE Alu -18 292 1 751 218 88 23 chr20 36447044 36447260 -30220745 + MIR SINE MIR 32 261 -1 395 257 55 0 chr20 36448257 36448366 -30219639 + MIR SINE MIR 37 151 -57 575 282 64 0 chr20 36448375 36448531 -30219474 + MER5B DNA MER1_type 1 166 -12 1888 117 66 0 chr20 36448725 36448998 -30219007 - AluSx SINE Alu -2 310 20 284 30 0 0 chr20 36449282 36449315 -30218690 - Tigger4(Zombi) DNA MER2_type 0 2731 2699 283 246 0 0 chr20 36449767 36449832 -30218173 - L2 LINE L2 0 3272 3208 297 234 31 0 chr20 36449926 36449990 -30218015 + L2 LINE L2 3201 3266 -6 1191 154 0 0 chr20 36450306 36450494 -30217511 + MER5A DNA MER1_type 2 189 0 2420 53 3 3 chr20 36451826 36452111 -30215894 - AluY SINE Alu -26 285 1 1827 118 0 16 chr20 36452198 36452367 -30215638 - AluSq SINE Alu -11 302 137 2188 113 17 0 chr20 36452367 36452660 -30215345 - AluSp SINE Alu -15 298 1 1827 118 0 16 chr20 36452660 36452745 -30215260 - AluSq SINE Alu -176 137 52 199 167 0 37 chr20 36452888 36452942 -30215063 + (TA)n Simple_repeat Simple_repeat 2 53 0 301 250 0 73 chr20 36452994 36453090 -30214915 - L1MC4 LINE L1 -1340 6702 6614 324 0 0 0 chr20 36453098 36453134 -30214871 + (TCTA)n Simple_repeat Simple_repeat 4 39 0 1343 158 0 35 chr20 36453196 36453424 -30214581 - AluJo SINE Alu -92 220 1 427 266 166 7 chr20 36453596 36453735 -30214270 + L1ME4a LINE L1 5951 6111 -10 2309 118 0 0 chr20 36453738 36454043 -30213962 - AluSg SINE Alu -1 309 5 402 105 0 0 chr20 36454711 36454768 -30213237 + Alu SINE Alu 2 58 -260 24 0 0 0 chr20 36455198 36455222 -30212783 + GC_rich Low_complexity Low_complexity 1 24 0 205 322 0 0 chr20 36455429 36455488 -30212517 + MIR SINE MIR 203 261 -1 515 256 32 13 chr20 36455645 36455801 -30212204 + MIR SINE MIR 24 182 -80 25 51 0 0 chr20 36456096 36456135 -30211870 + GC_rich Low_complexity Low_complexity 1 39 0 32 0 0 0 chr20 36456229 36456261 -30211744 + GC_rich Low_complexity Low_complexity 1 32 0 369 62 0 0 chr20 36456301 36456349 -30211656 + (CGG)n Simple_repeat Simple_repeat 3 50 0 323 175 0 0 chr20 36456688 36456745 -30211260 + L2 LINE L2 3211 3267 -5 2237 72 0 7 chr20 36457004 36457307 -30210698 - AluSc SINE Alu 0 305 5 1402 97 0 41 chr20 36457353 36457548 -30210457 - AluSx SINE Alu -125 187 1 2321 61 3 37 chr20 36457981 36458277 -30209728 - AluY SINE Alu -23 288 3 1210 194 13 9 chr20 36458575 36458751 -30209254 - AluJo SINE Alu 0 312 138 261 0 0 0 chr20 36458751 36458780 -30209225 + (TA)n Simple_repeat Simple_repeat 2 30 0 1995 171 0 0 chr20 36458780 36459089 -30208916 - AluSx SINE Alu -3 309 1 1210 194 13 9 chr20 36459089 36459138 -30208867 - AluJo SINE Alu -173 139 85 456 116 14 0 chr20 36459141 36459210 -30208795 - FRAM SINE Alu -64 112 43 2476 81 0 10 chr20 36460549 36460859 -30207146 + AluY SINE Alu 1 307 -4 1704 196 20 0 chr20 36460873 36461169 -30206836 + AluJb SINE Alu 6 307 -5 489 323 0 6 chr20 36461478 36461636 -30206369 + MIR3 SINE MIR 45 201 -7 1929 169 3 0 chr20 36461889 36462190 -30205815 + AluJo SINE Alu 1 302 -10 2133 71 96 0 chr20 36462440 36462721 -30205284 + AluY SINE Alu 1 308 -3 880 143 129 0 chr20 36463077 36463217 -30204788 + AluSg/x SINE Alu 136 293 -17 315 289 44 0 chr20 36463217 36463307 -30204698 - MIR SINE MIR -96 112 19 1229 167 5 5 chr20 36463634 36463849 -30204156 - MER20 DNA MER1_type -4 215 1 380 167 17 0 chr20 36464172 36464232 -30203773 - AluJ/FLAM SINE Alu -241 61 1 1580 186 11 4 chr20 36464288 36464562 -30203443 - AluJb SINE Alu -3 309 34 1835 128 36 43 chr20 36464670 36464975 -30203030 - AluSx SINE Alu -9 303 1 2264 96 20 3 chr20 36464982 36465283 -30202722 - AluSx SINE Alu -5 307 2 388 280 179 16 chr20 36465479 36465558 -30202447 + MARNA DNA Mariner 77 142 -444 2047 139 6 22 chr20 36465558 36465875 -30202130 - AluJb SINE Alu 0 312 1 388 280 179 16 chr20 36465875 36466195 -30201810 + MARNA DNA Mariner 142 567 -19 1651 157 41 27 chr20 36466583 36466877 -30201128 + AluJo SINE Alu 1 298 -14 2077 127 7 29 chr20 36466878 36467185 -30200820 + AluSx SINE Alu 11 310 -2 2359 76 3 9 chr20 36467246 36467561 -30200444 + AluSp SINE Alu 1 313 0 1416 173 6 70 chr20 36467567 36467897 -30200108 + AluJo SINE Alu 1 309 -3 1541 168 16 46 chr20 36468435 36468738 -30199267 + AluJo SINE Alu 1 294 -18 1328 139 139 0 chr20 36468746 36468990 -30199015 + AluJo SINE Alu 1 278 -34 2269 95 0 0 chr20 36469154 36469449 -30198556 + AluSx SINE Alu 5 299 -13 221 295 114 53 chr20 36469778 36469953 -30198052 + MIR SINE MIR 38 220 -42 352 255 179 27 chr20 36470399 36470583 -30197422 + MIR SINE MIR 7 218 -44 1271 139 84 0 chr20 36470681 36470883 -30197122 + MER20 DNA MER1_type 1 219 0 303 323 0 40 chr20 36470915 36471039 -30196966 + MIR SINE MIR 93 211 -51 1058 173 20 20 chr20 36471358 36471560 -30196445 - MLT1A2 LTR MaLR 0 374 173 1656 164 3 3 chr20 36471576 36471868 -30196137 - AluJb SINE Alu -8 304 13 2289 84 0 0 chr20 36472046 36472344 -30195661 + AluSc SINE Alu 1 298 -11 2011 143 16 0 chr20 36472567 36472874 -30195131 - AluSx SINE Alu 0 312 1 1820 144 7 0 chr20 36473326 36473627 -30194378 - AluSx SINE Alu 0 308 6 2212 113 0 0 chr20 36474631 36474933 -30193072 + AluSx SINE Alu 1 302 -10 2100 116 13 7 chr20 36475197 36475507 -30192498 + AluSx SINE Alu 1 312 0 2227 70 10 17 chr20 36475581 36475881 -30192124 + AluSp SINE Alu 1 298 -15 771 162 214 6 chr20 36475970 36476143 -30191862 - MER3 DNA MER1_type 0 209 1 199 316 11 63 chr20 36476588 36476683 -30191322 + L2 LINE L2 3181 3270 -2 1945 149 3 13 chr20 36476867 36477182 -30190823 + AluJb SINE Alu 1 312 0 2171 96 0 20 chr20 36477356 36477659 -30190346 + AluSg SINE Alu 1 297 -13 1071 136 0 0 chr20 36477662 36477824 -30190181 + AluSg/x SINE Alu 134 295 -15 2071 79 10 7 chr20 36477828 36478118 -30189887 + AluY SINE Alu 1 291 -20 216 0 0 0 chr20 36478125 36478149 -30189856 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 470 123 0 0 chr20 36478369 36478434 -30189571 + AluS SINE Alu 232 296 -16 731 89 13 146 chr20 36478911 36478952 -30189053 - MER46A DNA MER2_type -2498 233 188 2048 95 13 33 chr20 36478952 36479257 -30188748 + AluSx SINE Alu 9 307 -5 731 89 13 146 chr20 36479257 36479373 -30188632 - MER46A DNA MER2_type -2543 188 97 582 184 0 0 chr20 36479329 36479427 -30188578 + MER46A DNA MER2_type 5 102 -134 * 309 169 0 0 chr20 36479447 36479506 -30188499 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 389 190 0 13 chr20 36479528 36479607 -30188398 + MER46A DNA MER2_type 95 172 -64 2334 58 7 3 chr20 36479614 36479907 -30188098 + AluY SINE Alu 1 294 -17 687 210 0 0 chr20 36479929 36480048 -30187957 - FLAM_A SINE Alu -14 119 1 261 200 86 14 chr20 36480049 36480119 -30187886 + MIR SINE MIR 65 139 -123 2167 98 0 3 chr20 36480125 36480420 -30187585 + AluSc SINE Alu 1 294 -15 367 237 96 37 chr20 36480734 36480801 -30187204 - L2 LINE L2 -3 3310 3248 2096 205 105 15 chr20 36480801 36481342 -30186663 + MLT1E LTR MaLR 4 593 0 367 237 96 37 chr20 36481342 36481409 -30186596 - L2 LINE L2 -65 3248 3168 2066 202 79 36 chr20 36481586 36482106 -30185899 + MLT1F LTR MaLR 1 542 0 360 0 0 0 chr20 36482537 36482577 -30185428 + (TG)n Simple_repeat Simple_repeat 2 41 0 2024 133 0 0 chr20 36482583 36482884 -30185121 - AluSx SINE Alu -11 301 1 2004 118 0 3 chr20 36483523 36483811 -30184194 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr20 36483815 36483835 -30184170 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 255 226 97 90 chr20 36483839 36483891 -30184114 - L1ME4a LINE L1 -2 6119 6069 2175 105 0 3 chr20 36483891 36484195 -30183810 + AluSx SINE Alu 1 303 -9 2156 99 26 0 chr20 36484205 36484509 -30183496 + AluSx SINE Alu 1 312 0 255 226 97 90 chr20 36484509 36484600 -30183405 - L1ME4a LINE L1 -60 6061 5964 1424 199 34 14 chr20 36484804 36485096 -30182909 - AluJb SINE Alu -10 302 5 180 214 200 29 chr20 36485712 36485782 -30182223 - MIR SINE MIR -25 237 156 1982 133 7 7 chr20 36485784 36486093 -30181912 - AluSx SINE Alu -3 309 1 2127 112 7 0 chr20 36486101 36486397 -30181608 - AluSq SINE Alu -15 298 1 1851 36 28 4 chr20 36486409 36486659 -30181346 - AluY SINE Alu -1 310 55 1665 162 0 11 chr20 36536684 36536968 -30131037 - AluJo SINE Alu 0 312 32 2168 104 3 10 chr20 36536989 36537288 -30130717 - AluSq SINE Alu -16 297 1 229 319 44 26 chr20 36537366 36537479 -30130526 + MIR SINE MIR 130 244 -18 257 298 0 24 chr20 36537946 36538030 -30129975 - MIR SINE MIR -6 256 175 2131 79 0 11 chr20 36538045 36538324 -30129681 - AluY SINE Alu -5 306 31 646 71 0 20 chr20 36538342 36538441 -30129564 + (CCCCCT)n Simple_repeat Simple_repeat 6 102 0 1741 169 0 0 chr20 36538445 36538723 -30129282 - AluJo SINE Alu -34 278 1 1404 147 8 0 chr20 36538723 36538975 -30129030 - L1MB2 LINE L1 -346 5825 5572 2095 90 0 28 chr20 36539068 36539396 -30128609 - AluSq SINE Alu 0 322 3 1525 149 116 8 chr20 36539403 36539671 -30128334 - AluSg1 SINE Alu -6 303 7 310 240 66 66 chr20 36539696 36539817 -30128188 - MIR SINE MIR -113 149 29 288 300 44 0 chr20 36539751 36539841 -30128164 + MIR SINE MIR 51 144 -64 * 197 349 72 40 chr20 36540350 36540502 -30127503 + MIR SINE MIR 81 237 -25 341 290 112 0 chr20 36540665 36540772 -30127233 - MIR SINE MIR -53 209 91 589 297 26 0 chr20 36540809 36540964 -30127041 + L2 LINE L2 3114 3272 0 247 280 105 63 chr20 36541348 36541491 -30126514 - MIR SINE MIR -88 174 26 1775 157 0 35 chr20 36541559 36541761 -30126244 - AluJo SINE Alu -8 304 115 2128 121 0 3 chr20 36541761 36542067 -30125938 + AluSq SINE Alu 1 305 -8 1775 157 0 35 chr20 36542067 36542176 -30125829 - AluJo SINE Alu -197 115 4 249 195 0 0 chr20 36542288 36542329 -30125676 + Alu SINE Alu 3 43 -90 1731 166 3 7 chr20 36542330 36542613 -30125392 + AluJo SINE Alu 1 282 -30 237 65 0 0 chr20 36542616 36542647 -30125358 + (CAAAA)n Simple_repeat Simple_repeat 2 32 0 582 335 19 15 chr20 36542700 36542906 -30125099 + MIR SINE MIR 56 262 0 358 188 77 82 chr20 36543284 36543408 -30124597 - MIR SINE MIR -47 161 37 187 265 0 41 chr20 36543750 36543799 -30124206 + MIR SINE MIR 106 152 -110 293 324 39 0 chr20 36543811 36543913 -30124092 + MIR SINE MIR 21 126 -136 251 83 0 42 chr20 36543958 36544006 -30123999 + (CTCA)n Simple_repeat Simple_repeat 1 46 0 308 314 12 12 chr20 36544069 36544155 -30123850 + L2 LINE L2 3187 3272 0 2176 113 0 29 chr20 36544597 36544907 -30123098 + AluSx SINE Alu 1 301 -11 365 280 129 30 chr20 36545073 36545205 -30122800 - MIR SINE MIR -99 163 19 289 200 137 32 chr20 36545272 36545367 -30122638 - MIR SINE MIR 0 262 158 1594 172 3 14 chr20 36545612 36545923 -30122082 + AluJo SINE Alu 1 308 0 2205 115 6 6 chr20 36545926 36546238 -30121767 + AluSx SINE Alu 1 312 0 355 287 41 0 chr20 36546279 36546401 -30121604 - MIR SINE MIR -77 185 59 240 243 0 29 chr20 36546545 36546615 -30121390 + MER5A DNA MER1_type 118 185 -4 234 129 16 48 chr20 36546635 36546697 -30121308 + (CTA)n Simple_repeat Simple_repeat 2 61 0 2088 125 24 0 chr20 36546765 36547062 -30120943 + AluSx SINE Alu 1 304 -8 575 174 51 7 chr20 36547108 36547246 -30120759 - MIR SINE MIR -55 207 64 181 284 102 0 chr20 36547424 36547512 -30120493 - MIR3 SINE MIR -4 204 108 223 281 0 0 chr20 36548082 36548139 -30119866 + C-rich Low_complexity Low_complexity 1 57 0 1578 157 0 66 chr20 36548219 36548387 -30119618 - AluJo SINE Alu -13 299 160 2227 93 20 0 chr20 36548387 36548689 -30119316 - AluSx SINE Alu -4 308 1 1578 157 0 66 chr20 36548689 36548839 -30119166 - AluJo SINE Alu -152 160 2 235 313 87 0 chr20 36549119 36549234 -30118771 + L2 LINE L2 2925 3049 -223 323 285 47 64 chr20 36549412 36549588 -30118417 + MIR SINE MIR 15 194 -14 * 378 301 151 11 chr20 36549547 36549593 -30118412 - MIR SINE MIR 0 262 224 2304 63 3 0 chr20 36549593 36549922 -30118083 - AluSx SINE Alu 0 330 1 378 301 151 11 chr20 36549922 36550060 -30117945 - MIR SINE MIR -38 224 51 1745 78 0 13 chr20 36550089 36550319 -30117686 - AluY SINE Alu -8 303 77 1786 162 30 0 chr20 36550359 36550655 -30117350 + AluJo SINE Alu 2 306 -6 2344 83 0 3 chr20 36550731 36551032 -30116973 + AluSq SINE Alu 1 300 -13 290 247 49 0 chr20 36551116 36551197 -30116808 - MIR SINE MIR -115 147 63 731 179 106 64 chr20 36551592 36551909 -30116096 + MLT1D LTR MaLR 1 303 -202 2067 114 7 7 chr20 36551909 36552207 -30115798 - AluSx SINE Alu -14 298 1 2345 54 0 14 chr20 36552212 36552509 -30115496 - AluY SINE Alu -14 297 5 731 179 106 64 chr20 36552509 36552570 -30115435 + MLT1D LTR MaLR 306 496 -9 812 285 36 97 chr20 36552593 36552613 -30115392 - L2 LINE L2 -7 3306 3286 2307 76 10 0 chr20 36552613 36552904 -30115101 + AluY SINE Alu 1 294 -17 812 285 36 97 chr20 36552904 36553073 -30114932 - L2 LINE L2 -27 3286 3108 1826 117 38 73 chr20 36553073 36553389 -30114616 + AluSx SINE Alu 1 305 -7 812 285 36 97 chr20 36553389 36553693 -30114312 - L2 LINE L2 -205 3108 2842 1255 246 38 0 chr20 36553740 36553920 -30114085 - AluJb SINE Alu -8 304 107 396 0 0 0 chr20 36553920 36553964 -30114041 + (TG)n Simple_repeat Simple_repeat 2 45 0 1255 246 38 0 chr20 36553964 36554076 -30113929 - AluJb SINE Alu -205 107 1 211 271 0 0 chr20 36554267 36554315 -30113690 + L2 LINE L2 3266 3313 0 2266 109 0 0 chr20 36554535 36554839 -30113166 + AluSx SINE Alu 1 304 -8 337 358 128 0 chr20 36555779 36555958 -30112047 + L3 LINE CR1 899 1100 -477 2288 84 0 0 chr20 36556001 36556314 -30111691 + AluSg SINE Alu 1 313 0 857 136 0 0 chr20 36556319 36556444 -30111561 + FLAM_C SINE Alu 1 125 -18 309 51 0 0 chr20 36556446 36556485 -30111520 + (TAA)n Simple_repeat Simple_repeat 2 40 0 491 119 0 0 chr20 36556529 36556596 -30111409 + AluS SINE Alu 1 67 -246 834 197 0 0 chr20 36556604 36556746 -30111259 + FRAM SINE Alu 16 157 -19 305 271 12 24 chr20 36556746 36556783 -30111222 - L1ME4a LINE L1 -26 6095 6059 1994 129 33 3 chr20 36556783 36557086 -30110919 + AluSx SINE Alu 1 312 0 305 271 12 24 chr20 36557086 36557133 -30110872 - L1ME4a LINE L1 -62 6059 6012 626 195 51 0 chr20 36557136 36557254 -30110751 + MER5A DNA MER1_type 1 124 -65 230 269 0 0 chr20 36557343 36557395 -30110610 + L2 LINE L2 3221 3272 0 1460 124 0 0 chr20 36558065 36558267 -30109738 + AluSg/x SINE Alu 97 298 -14 2034 102 7 10 chr20 36558770 36559064 -30108941 + AluSx SINE Alu 1 293 -19 403 297 98 51 chr20 36559069 36559305 -30108700 - MIR SINE MIR -8 254 8 309 302 205 31 chr20 36559312 36559600 -30108405 + L2 LINE L2 2935 3272 0 1814 171 0 3 chr20 36559616 36559921 -30108084 + AluJo SINE Alu 1 304 -8 1247 111 40 58 chr20 36559980 36560205 -30107800 + AluJo SINE Alu 72 292 -20 222 289 83 41 chr20 36560621 36560742 -30107263 - MIR SINE MIR -109 153 28 1205 208 95 3 chr20 36560774 36561101 -30106904 + Charlie4a DNA MER1_type 30 386 -122 2191 112 10 0 chr20 36561101 36561404 -30106601 - AluSp SINE Alu -7 306 1 1171 187 0 0 chr20 36561477 36561680 -30106325 - AluJo SINE Alu -9 303 101 2011 122 13 3 chr20 36562292 36562595 -30105410 + AluSx SINE Alu 1 306 -6 1496 247 46 2 chr20 36562833 36563246 -30104759 + L1ME1 LINE L1 5713 6143 -23 681 308 136 19 chr20 36563374 36563890 -30104115 + L2 LINE L2 2735 3309 -4 2456 73 0 0 chr20 36564820 36565120 -30102885 + AluSx SINE Alu 1 300 -12 313 178 137 0 chr20 36565375 36565448 -30102557 - MIR SINE MIR -132 130 48 413 270 119 38 chr20 36565502 36565687 -30102318 - MIR SINE MIR 0 262 63 369 0 0 0 chr20 36565748 36565789 -30102216 + (TG)n Simple_repeat Simple_repeat 1 41 0 441 281 82 7 chr20 36566186 36566321 -30101684 + MIR3 SINE MIR 35 179 -29 437 247 117 31 chr20 36567246 36567408 -30100597 - MIR SINE MIR -77 185 10 287 319 111 28 chr20 36567736 36567952 -30100053 - MIR SINE MIR -25 237 4 322 206 0 14 chr20 36568216 36568289 -30099716 - L2 LINE L2 -1 3312 3241 249 159 0 0 chr20 36568885 36568929 -30099076 + (TG)n Simple_repeat Simple_repeat 2 45 0 306 213 27 13 chr20 36569779 36569854 -30098151 + L2 LINE L2 3197 3272 0 244 205 26 64 chr20 36570231 36570309 -30097696 + MIR3 SINE MIR 116 190 -18 360 0 0 0 chr20 36570357 36570397 -30097608 + (CA)n Simple_repeat Simple_repeat 2 41 0 252 0 0 0 chr20 36570439 36570467 -30097538 + (CA)n Simple_repeat Simple_repeat 2 29 0 540 0 0 0 chr20 36570509 36570569 -30097436 + (CA)n Simple_repeat Simple_repeat 2 61 0 424 238 34 121 chr20 36570747 36570836 -30097169 - MIR SINE MIR -41 221 159 2187 93 3 3 chr20 36570836 36571136 -30096869 - AluSq SINE Alu -13 300 1 424 238 34 121 chr20 36571136 36571252 -30096753 - MIR SINE MIR -103 159 34 283 237 0 26 chr20 36571570 36571646 -30096359 - L3 LINE CR1 -101 1476 1403 237 281 44 26 chr20 36572106 36572220 -30095785 - MIR3 SINE MIR -81 127 12 311 295 139 8 chr20 36572417 36572546 -30095459 + L2 LINE L2 3168 3313 0 499 278 92 23 chr20 36572682 36572855 -30095150 - MIR SINE MIR -24 238 54 206 216 0 0 chr20 36573377 36573414 -30094591 - MIR SINE MIR -58 150 114 30 93 0 0 chr20 36574868 36574954 -30093051 + GC_rich Low_complexity Low_complexity 1 86 0 267 217 22 65 chr20 36575621 36575805 -30092200 + (CCCCG)n Simple_repeat Simple_repeat 5 180 0 2482 65 0 0 chr20 36576449 36576759 -30091246 + AluSg SINE Alu 1 310 0 212 281 6 29 chr20 36577150 36577321 -30090684 + CT-rich Low_complexity Low_complexity 1 167 0 293 202 71 99 chr20 36578488 36578532 -30089473 - MIR SINE MIR -60 148 104 1763 182 148 81 chr20 36578532 36579088 -30088917 + MLT1G1 LTR MaLR 1 593 -2 293 202 71 99 chr20 36579088 36579169 -30088836 - MIR SINE MIR -104 104 26 209 204 23 0 chr20 36579515 36579559 -30088446 - L2 LINE L2 -246 3067 3023 2193 113 0 3 chr20 36579563 36579872 -30088133 - AluSc SINE Alu -1 308 1 2375 63 23 3 chr20 36579898 36580201 -30087804 - AluY SINE Alu -2 309 1 1891 107 48 14 chr20 36580246 36580535 -30087470 - AluSq SINE Alu -14 299 1 1289 136 0 15 chr20 36580540 36580714 -30087291 - AluSg/x SINE Alu -5 307 135 2130 127 0 0 chr20 36580714 36581013 -30086992 - AluSx SINE Alu -13 299 1 1289 136 0 15 chr20 36581013 36581036 -30086969 - AluSg/x SINE Alu -177 135 113 324 261 77 56 chr20 36581180 36581375 -30086630 - L1ME4a LINE L1 -131 5990 5792 2351 74 0 3 chr20 36581375 36581685 -30086320 + AluY SINE Alu 1 309 -2 2031 98 4 7 chr20 36581692 36581969 -30086036 + AluSp SINE Alu 1 276 -37 198 0 0 0 chr20 36581974 36581996 -30086009 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1293 161 18 5 chr20 36582144 36582368 -30085637 + 7SLRNA srpRNA srpRNA 1 227 -93 1911 135 7 10 chr20 36582368 36582671 -30085334 + AluSx SINE Alu 1 302 -10 1593 155 29 41 chr20 36582673 36582989 -30085016 + AluJo SINE Alu 1 312 0 2004 147 0 10 chr20 36583071 36583385 -30084620 - AluSx SINE Alu -1 311 1 2072 117 0 29 chr20 36583385 36583692 -30084313 - AluSx SINE Alu -14 298 1 1830 164 0 10 chr20 36584496 36584801 -30083204 - AluJb SINE Alu -10 302 1 207 286 18 0 chr20 36585319 36585375 -30082630 + L3 LINE CR1 1433 1489 -88 723 226 72 15 chr20 36585515 36585710 -30082295 - MIR SINE MIR -54 208 3 538 282 134 10 chr20 36585864 36586155 -30081850 + L1ME4a LINE L1 5577 5903 -218 2152 116 0 0 chr20 36586159 36586461 -30081544 + AluSx SINE Alu 1 302 -10 256 228 105 0 chr20 36586523 36586637 -30081368 + L1ME4a LINE L1 5996 6121 0 1459 104 136 16 chr20 36586644 36586916 -30081089 + AluSg1 SINE Alu 1 302 0 1614 86 0 0 chr20 36586997 36587206 -30080799 + AluY SINE Alu 96 304 -7 1924 141 10 0 chr20 36587351 36587649 -30080356 - AluJb SINE Alu -11 301 1 320 344 15 15 chr20 36587724 36587855 -30080150 - MIR3 SINE MIR -8 200 70 608 195 6 0 chr20 36588654 36588828 -30079177 + (CA)n Simple_repeat Simple_repeat 1 175 0 2066 127 16 0 chr20 36589149 36589456 -30078549 + AluSx SINE Alu 1 312 0 209 189 0 0 chr20 36589971 36590008 -30077997 + GA-rich Low_complexity Low_complexity 2 38 0 197 326 51 10 chr20 36590179 36590277 -30077728 + MIR SINE MIR 41 142 -66 2068 132 0 0 chr20 36590344 36590647 -30077358 + AluSx SINE Alu 1 303 -9 549 230 28 15 chr20 36590769 36590933 -30077072 + MIR3 SINE MIR 6 175 -63 410 247 68 48 chr20 36591406 36591552 -30076453 - L2 LINE L2 0 3313 3165 1535 118 12 144 chr20 36591605 36591944 -30076061 + AluJo SINE Alu 2 295 -17 238 209 0 109 chr20 36591976 36592086 -30075919 + L1ME4a LINE L1 5977 6074 -47 366 23 0 0 chr20 36592104 36592147 -30075858 + (TA)n Simple_repeat Simple_repeat 2 44 0 2106 116 0 7 chr20 36592148 36592441 -30075564 - AluSx SINE Alu -21 291 1 189 250 78 0 chr20 36592611 36592675 -30075330 + MIR3 SINE MIR 115 183 -25 1858 157 10 3 chr20 36593145 36593444 -30074561 + AluJb SINE Alu 1 301 -11 595 289 65 44 chr20 36593613 36594000 -30074005 - L2 LINE L2 -2143 1171 777 1161 174 116 58 chr20 36594306 36594582 -30073423 + AluJo SINE Alu 1 292 -10 231 281 62 52 chr20 36594673 36594769 -30073236 - L3 LINE CR1 -1070 507 411 2317 253 86 51 chr20 36594939 36595181 -30072824 + L2 LINE L2 2049 2281 -1032 1909 140 0 0 chr20 36595181 36595467 -30072538 - AluJb SINE Alu -11 301 16 2317 253 86 51 chr20 36595467 36595857 -30072148 + L2 LINE L2 2281 2656 -657 2020 121 0 0 chr20 36595857 36596162 -30071843 + AluSx SINE Alu 1 305 0 2317 253 86 51 chr20 36596162 36596520 -30071485 + L2 LINE L2 2656 3000 -313 1621 162 3 21 chr20 36596520 36596845 -30071160 + AluJo SINE Alu 1 320 0 2317 253 86 51 chr20 36596845 36596918 -30071087 + L2 LINE L2 3000 3069 -244 2439 66 7 0 chr20 36596918 36597222 -30070783 - AluSq SINE Alu -7 306 1 2317 253 86 51 chr20 36597222 36597380 -30070625 + L2 LINE L2 3069 3313 0 455 295 177 4 chr20 36597886 36598140 -30069865 - L2 LINE L2 -186 3127 2830 1242 180 3 105 chr20 36598174 36598359 -30069646 - AluJo SINE Alu -12 300 162 2104 98 7 3 chr20 36598359 36598656 -30069349 + AluSc SINE Alu 1 298 -11 1242 180 3 105 chr20 36598656 36598804 -30069201 - AluJo SINE Alu -150 162 1 267 86 0 0 chr20 36598811 36598846 -30069159 - Alu SINE Alu -261 40 6 495 259 70 11 chr20 36598865 36599050 -30068955 - L2 LINE L2 -519 2795 2600 1204 116 0 0 chr20 36600282 36600454 -30067551 - AluSg/x SINE Alu -17 295 124 2395 72 3 0 chr20 36600470 36600774 -30067231 + AluY SINE Alu 1 305 -6 1978 127 0 3 chr20 36600784 36601109 -30066896 + AluSx SINE Alu 1 324 0 229 257 171 7 chr20 36601825 36601955 -30066050 - L1ME4a LINE L1 -10 6111 5955 189 0 0 0 chr20 36601955 36601976 -30066029 + (TG)n Simple_repeat Simple_repeat 2 22 0 343 68 34 17 chr20 36602434 36602493 -30065512 + (TTTC)n Simple_repeat Simple_repeat 1 60 0 2013 108 6 43 chr20 36602498 36602822 -30065183 - AluSq SINE Alu -1 312 1 1198 114 0 0 chr20 36603740 36603906 -30064099 - AluSg/x SINE Alu -19 291 126 817 164 0 15 chr20 36604555 36604689 -30063316 + FLAM_A SINE Alu 1 132 -1 741 216 99 39 chr20 36605832 36606163 -30061842 + LTR33A LTR ERVL 1 386 -137 1624 113 18 0 chr20 36606285 36606514 -30061491 - AluSg/x SINE Alu -15 297 65 2166 110 0 0 chr20 36606530 36606820 -30061185 + AluSx SINE Alu 1 290 -22 944 206 0 0 chr20 36606917 36607082 -30060923 - FRAM SINE Alu -11 165 1 199 196 39 20 chr20 36607132 36607183 -30060822 + L2 LINE L2 2698 2749 -565 236 293 40 98 chr20 36607225 36607450 -30060555 + L2 LINE L2 2870 3081 -191 25 0 0 0 chr20 36607530 36607555 -30060450 + AT_rich Low_complexity Low_complexity 1 25 0 1602 120 51 4 chr20 36607835 36608110 -30059895 - MER2 DNA MER2_type 0 345 58 341 49 0 0 chr20 36608110 36608175 -30059830 - AluY SINE Alu 0 307 243 1159 50 0 7 chr20 36608177 36608318 -30059687 - AluY SINE Alu -171 140 1 337 176 0 108 chr20 36608319 36608393 -30059612 - MER2 DNA MER2_type -278 67 2 2072 110 3 35 chr20 36608600 36608919 -30059086 + AluSg SINE Alu 1 309 -1 189 0 0 0 chr20 36609293 36609314 -30058691 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 1655 183 21 0 chr20 36610084 36610373 -30057632 - AluJb SINE Alu -17 295 1 2339 94 3 0 chr20 36610677 36610985 -30057020 + AluSg SINE Alu 1 309 -1 1468 146 0 64 chr20 36611229 36611496 -30056509 + AluSx SINE Alu 56 305 -7 286 319 130 5 chr20 36611729 36611864 -30056141 - L2 LINE L2 -1355 1959 1794 2161 100 0 0 chr20 36611864 36612155 -30055850 + AluSg SINE Alu 6 296 -14 286 319 130 5 chr20 36612155 36612204 -30055801 - L2 LINE L2 -1520 1794 1752 1260 85 64 110 chr20 36612204 36612296 -30055709 + L1MA5A LINE L1 6026 6121 -176 2179 112 0 0 chr20 36612296 36612591 -30055414 - AluSx SINE Alu -17 295 1 1260 85 64 110 chr20 36612591 36612616 -30055389 + L1MA5A LINE L1 6121 6146 -151 2027 103 7 23 chr20 36612616 36612917 -30055088 - AluSc SINE Alu -13 296 1 1260 85 64 110 chr20 36612917 36613080 -30054925 + L1MA5A LINE L1 6146 6294 -3 1256 135 0 0 chr20 36613221 36613406 -30054599 - AluJb SINE Alu -23 289 105 464 169 0 0 chr20 36613407 36613484 -30054521 + AluJ/FRAM SINE Alu 219 295 -17 595 259 0 30 chr20 36613485 36613499 -30054506 - MER3 DNA MER1_type 0 162 149 1898 173 0 0 chr20 36613499 36613799 -30054206 + AluJo SINE Alu 1 300 -12 595 259 0 30 chr20 36613799 36613950 -30054055 - MER3 DNA MER1_type -13 149 2 492 318 90 64 chr20 36613952 36614238 -30053767 - L2 LINE L2 -1750 1564 1287 2016 104 3 7 chr20 36614238 36614525 -30053480 - AluSx SINE Alu -24 288 3 492 318 90 64 chr20 36614525 36614789 -30053216 - L2 LINE L2 -2027 1287 1031 2110 119 0 3 chr20 36614789 36615084 -30052921 - AluSx SINE Alu -18 294 1 492 318 90 64 chr20 36615084 36615309 -30052696 - L2 LINE L2 -2283 1031 768 2034 88 0 7 chr20 36615311 36615583 -30052422 - AluSc SINE Alu -38 271 2 2132 106 10 6 chr20 36615585 36615896 -30052109 - AluSx SINE Alu 0 312 1 27 73 0 0 chr20 36615929 36615984 -30052021 + AT_rich Low_complexity Low_complexity 1 55 0 261 100 0 0 chr20 36616093 36616143 -30051862 + L1ME4a LINE L1 6061 6110 -11 2172 86 0 0 chr20 36616482 36616786 -30051219 + AluSg SINE Alu 1 304 0 433 255 172 21 chr20 36617142 36617334 -30050671 + MIR SINE MIR 15 235 -27 2074 120 0 7 chr20 36617734 36618033 -30049972 + AluSq SINE Alu 1 297 -16 319 250 89 9 chr20 36618043 36618155 -30049850 + L1MC5 LINE L1 7754 7874 -87 2023 134 7 0 chr20 36618201 36618506 -30049499 + AluSx SINE Alu 1 307 -5 441 217 108 16 chr20 36618511 36618640 -30049365 + L1MC5 LINE L1 7726 7866 -95 2209 129 0 0 chr20 36618842 36619137 -30048868 - AluSx SINE Alu -17 295 1 1474 156 6 117 chr20 36619137 36619470 -30048535 - AluJo SINE Alu -5 297 2 361 238 0 0 chr20 36619515 36619578 -30048427 - FRAM/FAM SINE Alu -106 60 1 1123 95 14 0 chr20 36619585 36619732 -30048273 - AluSg1 SINE Alu -10 300 152 672 79 11 0 chr20 36619732 36619821 -30048184 - AluSg1 SINE Alu -219 90 1 2034 140 3 10 chr20 36619907 36620221 -30047784 - AluSx SINE Alu 0 312 1 22 0 0 0 chr20 36620261 36620283 -30047722 + AT_rich Low_complexity Low_complexity 1 22 0 1750 154 21 4 chr20 36620303 36620583 -30047422 - AluJb SINE Alu -27 285 1 570 210 117 6 chr20 36620618 36620780 -30047225 + MER5C DNA MER1_type 127 306 -18 248 252 126 19 chr20 36620937 36620983 -30047022 + LTR67 LTR ERVL 441 481 -76 2262 103 0 0 chr20 36620983 36621307 -30046698 - AluSx SINE Alu 0 312 1 248 252 126 19 chr20 36621307 36621363 -30046642 + LTR67 LTR ERVL 481 554 -3 2370 87 0 31 chr20 36621432 36621753 -30046252 + AluSq SINE Alu 1 311 -2 1146 153 0 108 chr20 36621927 36621990 -30046015 + AluJb SINE Alu 83 151 -161 2493 54 10 0 chr20 36621990 36622285 -30045720 + AluY SINE Alu 1 298 -13 1146 153 0 108 chr20 36622285 36622470 -30045535 + AluJb SINE Alu 151 304 -8 2148 134 0 0 chr20 36622493 36622791 -30045214 + AluSx SINE Alu 1 298 -14 357 323 124 0 chr20 36622793 36622979 -30045026 - MIR SINE MIR -5 257 49 715 179 8 0 chr20 36623018 36623135 -30044870 + FLAM_C SINE Alu 1 118 -15 30 45 0 0 chr20 36623135 36623179 -30044826 + AT_rich Low_complexity Low_complexity 1 44 0 398 250 161 6 chr20 36623553 36623721 -30044284 - MIR SINE MIR -24 238 45 189 74 0 0 chr20 36623735 36623762 -30044243 + (CAA)n Simple_repeat Simple_repeat 2 28 0 692 152 85 67 chr20 36624893 36625057 -30042948 + MER5A DNA MER1_type 13 179 -10 282 325 26 17 chr20 36625173 36625290 -30042715 - MIR SINE MIR -119 143 26 270 274 102 42 chr20 36625573 36625738 -30042267 + MIR SINE MIR 22 192 -62 411 269 87 43 chr20 36626352 36626567 -30041438 - MIR SINE MIR -26 236 12 283 313 46 15 chr20 36626864 36626995 -30041010 + MER5A DNA MER1_type 55 189 0 240 258 15 15 chr20 36627262 36627328 -30040677 + L2 LINE L2 3208 3273 -40 661 140 63 144 chr20 36628015 36628085 -30039920 + LOR1-int LTR ERV1 3392 3466 -4654 2214 128 3 0 chr20 36628085 36628389 -30039616 - AluSx SINE Alu -7 305 1 661 140 63 144 chr20 36628389 36628540 -30039465 + LOR1-int LTR ERV1 3466 3595 -4525 1090 188 5 5 chr20 36628543 36628750 -30039255 - AluSg/x SINE Alu -21 289 83 1002 104 7 14 chr20 36628764 36628908 -30039097 - MER50 LTR ERV1 -482 252 110 2156 116 0 3 chr20 36628910 36629203 -30038802 - AluSc SINE Alu -17 292 1 7286 140 33 56 chr20 36629203 36629318 -30038687 - MER50-int LTR ERV1 -5940 1265 1149 261 195 0 0 chr20 36629318 36629359 -30038646 + AluSx SINE Alu 1 41 -262 5061 162 21 25 chr20 36629360 36630333 -30037672 + LTR5 LTR ERVK 1 969 0 2081 109 0 0 chr20 36630333 36630607 -30037398 + AluSx SINE Alu 35 310 -2 7286 140 33 56 chr20 36630607 36631694 -30036311 - MER50-int LTR ERV1 -6055 1150 47 2651 97 17 6 chr20 36631694 36632054 -30035951 - THE1B LTR MaLR 0 364 1 7286 140 33 56 chr20 36632054 36632097 -30035908 - MER50-int LTR ERV1 -7158 47 5 2105 195 51 31 chr20 36632102 36632589 -30035416 - MER50 LTR ERV1 -23 711 215 288 122 0 0 chr20 36632565 36632606 -30035399 - AluS SINE Alu -208 94 54 * 1051 191 11 11 chr20 36632608 36632791 -30035214 - AluSg1 SINE Alu -125 184 2 3851 151 3 7 chr20 36632791 36633381 -30034624 + LOR1-int LTR ERV1 3585 4172 -3948 562 134 0 0 chr20 36633400 36633482 -30034523 + AluJb SINE Alu 24 105 -207 524 148 158 0 chr20 36633482 36633583 -30034422 + MER50 LTR ERV1 1 117 -617 385 43 0 0 chr20 36633584 36633631 -30034374 + AluY SINE Alu 1 47 -252 1399 178 0 21 chr20 36633749 36633991 -30034014 + AluJb SINE Alu 64 300 -12 820 176 10 107 chr20 36633991 36634023 -30033982 + Tigger2 DNA MER2_type 2534 2568 -150 1590 199 27 7 chr20 36634023 36634315 -30033690 + AluJo SINE Alu 1 298 -14 820 176 10 107 chr20 36634315 36634416 -30033589 + Tigger2 DNA MER2_type 2568 2643 -75 2001 163 0 0 chr20 36634416 36634723 -30033282 + AluSx SINE Alu 1 307 -5 820 176 10 107 chr20 36634723 36634793 -30033212 + Tigger2 DNA MER2_type 2643 2718 0 2484 58 0 7 chr20 36634839 36635133 -30032872 + AluY SINE Alu 1 292 -19 592 262 174 0 chr20 36635139 36635311 -30032694 + MIR SINE MIR 29 230 -32 856 165 0 0 chr20 36635312 36635439 -30032566 + FLAM_A SINE Alu 1 127 -6 24 0 0 0 chr20 36635504 36635528 -30032477 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr20 36635859 36635880 -30032125 + AT_rich Low_complexity Low_complexity 1 21 0 2095 128 3 0 chr20 36636333 36636629 -30031376 + AluSg SINE Alu 1 297 -13 22 0 0 0 chr20 36636872 36636894 -30031111 + AT_rich Low_complexity Low_complexity 1 22 0 586 114 155 23 chr20 36636981 36637176 -30030829 - AluJb SINE Alu -18 294 37 353 138 149 23 chr20 36637351 36637438 -30030567 - MER103 DNA DNA -7 159 62 2144 113 3 0 chr20 36637522 36637814 -30030191 - AluSx SINE Alu -17 295 3 1351 141 0 10 chr20 36637953 36638152 -30029853 - AluJo SINE Alu -115 197 1 1002 183 0 92 chr20 36638318 36638547 -30029458 + AluJb SINE Alu 100 307 -5 870 121 0 0 chr20 36638568 36638684 -30029321 + AluJo/FLAM SINE Alu 1 116 -186 372 104 0 0 chr20 36638684 36638732 -30029273 - Alu SINE Alu -255 48 1 1991 178 12 3 chr20 36638909 36639252 -30028753 - MER7A DNA MER2_type -1 345 2 324 0 0 0 chr20 36639253 36639289 -30028716 + (TG)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr20 36639413 36639434 -30028571 + (TG)n Simple_repeat Simple_repeat 2 22 0 225 154 0 0 chr20 36639676 36639715 -30028290 + (TG)n Simple_repeat Simple_repeat 1 39 0 226 225 0 0 chr20 36639893 36639933 -30028072 + (TCCA)n Simple_repeat Simple_repeat 1 40 0 443 243 9 9 chr20 36640542 36640653 -30027352 - L1ME3 LINE L1 -6 6156 6046 1590 211 17 10 chr20 36641049 36641347 -30026658 + AluJb SINE Alu 1 300 -12 1011 134 41 41 chr20 36641544 36641738 -30026267 + L1MB5 LINE L1 5972 6165 -9 2079 129 30 54 chr20 36641791 36641978 -30026027 - THE1B LTR MaLR 0 364 188 2258 93 4 0 chr20 36641978 36642293 -30025712 - AluSc SINE Alu 0 317 2 2079 129 30 54 chr20 36642293 36642477 -30025528 - THE1B LTR MaLR -176 188 1 7768 113 20 3 chr20 36642477 36643553 -30024452 - THE1B-int LTR MaLR 0 1580 486 353 314 103 0 chr20 36643871 36644056 -30023949 - MIR SINE MIR -9 253 50 229 280 120 10 chr20 36644049 36644149 -30023856 + L2 LINE L2 3158 3268 -4 * 1800 167 40 30 chr20 36644772 36645143 -30022862 - THE1C LTR MaLR 0 375 1 192 286 132 0 chr20 36645434 36645525 -30022480 - MIR SINE MIR -99 163 61 25 31 0 0 chr20 36646318 36646350 -30021655 + AT_rich Low_complexity Low_complexity 1 32 0 2229 125 0 10 chr20 36646382 36646695 -30021310 + AluSx SINE Alu 3 312 0 1988 159 0 0 chr20 36646718 36647008 -30020997 + AluJb SINE Alu 2 291 -21 1555 189 0 8 chr20 36647992 36648256 -30019749 - AluJo SINE Alu -30 282 21 1909 128 27 20 chr20 36648344 36648642 -30019363 + AluSx SINE Alu 1 300 -12 1828 170 6 13 chr20 36648660 36648971 -30019034 + AluJo SINE Alu 1 309 -3 2307 97 0 3 chr20 36648973 36649273 -30018732 + AluSc SINE Alu 1 299 -10 603 237 26 14 chr20 36649282 36649448 -30018557 + L1MC4 LINE L1 7210 7452 -433 1240 133 0 0 chr20 36649550 36649715 -30018290 - AluSq SINE Alu -145 168 4 1716 185 71 63 chr20 36649723 36650132 -30017873 + L1MC4 LINE L1 7445 7849 -193 1414 196 36 11 chr20 36650132 36650407 -30017598 - AluJo SINE Alu -30 282 1 1716 185 71 63 chr20 36650407 36650418 -30017587 + L1MC4 LINE L1 7849 7858 -184 1524 147 135 4 chr20 36650418 36650677 -30017328 - AluJb SINE Alu -9 293 1 1716 185 71 63 chr20 36650677 36650731 -30017274 + L1MC4 LINE L1 7858 7924 -118 2265 95 7 3 chr20 36650732 36651027 -30016978 - AluY SINE Alu -15 296 1 531 224 0 0 chr20 36651056 36651163 -30016842 + AluSg/x SINE Alu 187 293 -17 207 0 0 0 chr20 36651166 36651189 -30016816 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 284 173 0 19 chr20 36651346 36651398 -30016607 + AluJo/FLAM SINE Alu 78 128 -174 714 206 7 7 chr20 36651398 36651534 -30016471 + FLAM_A SINE Alu 2 137 -5 421 101 58 0 chr20 36651555 36651624 -30016381 - LTR23 LTR ERV1 0 437 365 1609 181 4 11 chr20 36651696 36651977 -30016028 + AluJo SINE Alu 1 279 -33 248 197 0 30 chr20 36651978 36652044 -30015961 + G-rich Low_complexity Low_complexity 4 67 0 * 349 183 15 51 chr20 36652030 36652167 -30015838 + GA-rich Low_complexity Low_complexity 1 132 0 900 171 135 60 chr20 36652182 36652463 -30015542 - LTR56 LTR ERV1 -135 310 9 2367 102 3 0 chr20 36652605 36652909 -30015096 + AluSg SINE Alu 1 305 -5 652 234 188 13 chr20 36652994 36653233 -30014772 + L1ME LINE L1 13 293 -5777 639 226 117 30 chr20 36653234 36653581 -30014424 + L1ME LINE L1 5078 5461 -637 1096 176 0 0 chr20 36653809 36653979 -30014026 - FAM SINE Alu -10 175 6 2241 94 3 13 chr20 36654098 36654396 -30013609 + AluY SINE Alu 1 295 -16 2402 87 0 0 chr20 36654398 36654698 -30013307 + AluSg SINE Alu 1 300 -10 281 95 24 0 chr20 36654698 36654740 -30013265 + Charlie7 DNA MER1_type 51 93 -2519 2326 113 0 0 chr20 36654768 36655068 -30012937 + AluSx SINE Alu 1 300 -12 1666 144 90 11 chr20 36655446 36655723 -30012282 + AluSx SINE Alu 1 299 -13 802 135 8 8 chr20 36655937 36656127 -30011878 + FLAM_C SINE Alu 1 190 0 2322 102 3 0 chr20 36656207 36656512 -30011493 + AluSx SINE Alu 1 306 -6 1649 202 12 84 chr20 36656988 36657347 -30010658 + L1MD2 LINE L1 5336 5582 -777 2094 120 0 3 chr20 36657347 36657630 -30010375 + AluSx SINE Alu 1 282 -30 1649 202 12 84 chr20 36657630 36657979 -30010026 + L1MD2 LINE L1 5582 5954 -405 1316 103 5 73 chr20 36657991 36658195 -30009810 + AluSq SINE Alu 1 190 -123 2101 141 3 3 chr20 36658389 36658702 -30009303 - AluSq SINE Alu 0 313 1 2405 94 0 0 chr20 36659316 36659615 -30008390 - AluSx SINE Alu -13 299 1 1349 178 141 4 chr20 36659741 36660011 -30007994 + AluJo SINE Alu 3 309 -3 1571 153 60 43 chr20 36660050 36660350 -30007655 - AluJo SINE Alu -7 305 1 990 166 105 0 chr20 36660421 36660602 -30007403 - AluJb SINE Alu -9 303 104 2381 103 0 0 chr20 36660603 36660903 -30007102 + AluSx SINE Alu 1 300 -12 576 201 13 34 chr20 36661027 36661176 -30006829 + L1M4 LINE L1 5052 5197 -949 514 240 123 28 chr20 36661289 36661468 -30006537 - L2 LINE L2 -906 2408 2213 1418 156 128 49 chr20 36661468 36661851 -30006154 + MLT2B1 LTR ERVL 1 459 -61 2425 98 0 0 chr20 36661851 36662157 -30005848 + AluSx SINE Alu 2 307 -5 1736 191 0 7 chr20 36662342 36662640 -30005365 + AluJb SINE Alu 1 296 -16 2329 63 3 11 chr20 36664059 36664369 -30003636 + AluSp SINE Alu 1 308 0 2425 62 0 33 chr20 36664576 36664881 -30003124 - AluY SINE Alu -16 295 1 287 270 43 87 chr20 36664954 36665139 -30002866 - LTR16C LTR ERVL 0 491 315 978 183 94 0 chr20 36665181 36665372 -30002633 + MER3 DNA MER1_type 1 209 0 355 277 0 0 chr20 36665463 36665557 -30002448 + L2 LINE L2 3220 3313 0 2358 106 0 0 chr20 36665724 36666026 -30001979 + AluSg SINE Alu 2 303 -7 1280 81 0 6 chr20 36666026 36666186 -30001819 + AluY SINE Alu 37 195 -116 2369 85 3 0 chr20 36666492 36666785 -30001220 + AluSp SINE Alu 1 294 -19 231 103 0 0 chr20 36666877 36666916 -30001089 + (TATG)n Simple_repeat Simple_repeat 2 40 0 958 168 12 12 chr20 36666933 36667100 -30000905 - AluJo SINE Alu -29 283 117 262 250 132 0 chr20 36667163 36667239 -30000766 - MIR SINE MIR -106 156 71 1845 105 23 98 chr20 36667478 36667805 -30000200 + AluSx SINE Alu 1 304 0 1896 103 57 40 chr20 36667880 36668023 -29999982 + AluSq SINE Alu 1 140 -173 2255 61 44 14 chr20 36668023 36668317 -29999688 + AluY SINE Alu 1 303 -8 1896 103 57 40 chr20 36668317 36668474 -29999531 + AluSq SINE Alu 140 306 -7 360 0 0 0 chr20 36669190 36669230 -29998775 + (TG)n Simple_repeat Simple_repeat 2 41 0 291 28 0 0 chr20 36669285 36669321 -29998684 + (TG)n Simple_repeat Simple_repeat 2 37 0 309 26 0 0 chr20 36669356 36669394 -29998611 + (TG)n Simple_repeat Simple_repeat 2 39 0 351 0 0 0 chr20 36669431 36669470 -29998535 + (TG)n Simple_repeat Simple_repeat 1 39 0 1978 108 0 0 chr20 36669589 36669848 -29998157 + AluSc SINE Alu 50 308 -1 278 221 0 15 chr20 36669860 36669928 -29998077 - MER92A LTR ERV1 -47 365 299 2273 104 3 0 chr20 36669936 36670244 -29997761 + AluSx SINE Alu 1 309 -3 1165 146 0 40 chr20 36670285 36670428 -29997577 + AluSx SINE Alu 1 135 -177 2333 71 0 7 chr20 36670428 36670736 -29997269 + AluSc SINE Alu 1 306 -3 941 220 57 86 chr20 36670736 36671050 -29996955 - MER92A LTR ERV1 -107 305 1 195 286 126 42 chr20 36671718 36671837 -29996168 - L2 LINE L2 -7 3265 3137 313 235 10 31 chr20 36673591 36673689 -29994316 - MIR SINE MIR -20 242 147 30 0 0 0 chr20 36673689 36673719 -29994286 + AT_rich Low_complexity Low_complexity 1 30 0 295 233 0 0 chr20 36673747 36673807 -29994198 - MIR SINE MIR -45 217 158 838 158 7 7 chr20 36673827 36673973 -29994032 - AluSg/x SINE Alu -13 299 154 1025 190 0 20 chr20 36674087 36674287 -29993718 - AluJo SINE Alu -116 196 1 2131 107 17 0 chr20 36674385 36674675 -29993330 - AluSx SINE Alu -17 295 1 306 255 33 72 chr20 36674802 36674883 -29993122 + MLT1L LTR MaLR 443 517 -98 2301 112 34 57 chr20 36674883 36675090 -29992915 + MER51B LTR ERV1 1 196 -181 2269 77 0 7 chr20 36675090 36675388 -29992617 - AluSx SINE Alu -16 296 1 2301 112 34 57 chr20 36675388 36675565 -29992440 + MER51B LTR ERV1 196 376 -1 306 255 33 72 chr20 36675565 36675636 -29992369 + MLT1L LTR MaLR 517 589 -26 1179 203 61 75 chr20 36675914 36676259 -29991746 + MLT1B LTR MaLR 3 342 -48 538 242 34 96 chr20 36676259 36676355 -29991650 - LTR35 LTR ERV1 0 618 536 2135 131 0 3 chr20 36676355 36676669 -29991336 - AluSp SINE Alu 0 313 1 538 242 34 96 chr20 36676669 36676750 -29991255 - LTR35 LTR ERV1 -82 536 452 2034 129 0 3 chr20 36676753 36677055 -29990950 - AluSx SINE Alu -11 301 1 3356 92 37 39 chr20 36677139 36677651 -29990354 + MER9 LTR ERVK 1 511 0 468 110 10 70 chr20 36677663 36677763 -29990242 - LTR43 LTR ERV1 -324 278 185 256 239 0 138 chr20 36677885 36678015 -29989990 - LTR35 LTR ERV1 -506 112 1 283 204 0 0 chr20 36678015 36678059 -29989946 + MLT1B LTR MaLR 339 382 -8 1588 166 3 55 chr20 36678230 36678555 -29989450 + AluSx SINE Alu 1 308 -4 2063 120 0 0 chr20 36679063 36679354 -29988651 + AluSg SINE Alu 1 291 -19 1813 145 17 3 chr20 36679944 36680241 -29987764 + AluJo SINE Alu 1 301 -11 414 230 200 15 chr20 36680244 36680379 -29987626 + MIR SINE MIR 28 187 -75 1522 136 16 0 chr20 36680442 36680684 -29987321 + AluSx SINE Alu 3 248 -64 1415 150 23 112 chr20 36680901 36681248 -29986757 - AluYb8 SINE Alu 0 318 3 334 230 14 2 chr20 36681299 36681382 -29986623 + MIR SINE MIR 73 154 -63 295 322 82 27 chr20 36681445 36681591 -29986414 + MLT1K LTR MaLR 142 295 -293 936 205 27 137 chr20 36681632 36681913 -29986092 + L2 LINE L2 2812 3122 -191 2048 107 3 7 chr20 36681913 36682223 -29985782 - AluY SINE Alu -2 309 1 2042 138 0 0 chr20 36682233 36682538 -29985467 - AluJb SINE Alu -3 309 5 936 205 27 137 chr20 36682538 36682689 -29985316 + L2 LINE L2 3131 3206 -107 1058 158 0 0 chr20 36682790 36682967 -29985038 - AluJo SINE Alu 0 312 136 22 25 0 25 chr20 36682990 36683017 -29984988 + AT_rich Low_complexity Low_complexity 1 28 -11 1807 157 0 3 chr20 36683017 36683304 -29984701 - AluJb SINE Alu -26 286 1 22 25 0 25 chr20 36683304 36683316 -29984689 + AT_rich Low_complexity Low_complexity 28 39 0 775 181 15 0 chr20 36683316 36683449 -29984556 - AluJo SINE Alu -176 136 2 1403 203 0 40 chr20 36683458 36683779 -29984226 - AluJb SINE Alu -2 310 3 1982 93 29 7 chr20 36683804 36684105 -29983900 - AluSx SINE Alu 0 307 1 305 228 37 77 chr20 36684630 36684739 -29983266 + MIR SINE MIR 8 110 -103 1973 88 0 70 chr20 36684848 36685179 -29982826 + AluSx SINE Alu 5 312 0 1992 68 65 38 chr20 36685502 36685652 -29982353 - AluSq SINE Alu -11 302 158 2159 90 7 7 chr20 36685652 36685951 -29982054 - AluSg SINE Alu -11 299 1 1992 68 65 38 chr20 36685951 36686093 -29981912 - AluSq SINE Alu -155 158 2 1812 157 20 0 chr20 36686200 36686505 -29981500 - AluSx SINE Alu -1 311 1 228 289 26 66 chr20 36686531 36686607 -29981398 + MIR SINE MIR 7 79 -183 24 39 0 0 chr20 36689119 36689145 -29978860 + AT_rich Low_complexity Low_complexity 1 26 0 349 226 250 16 chr20 36689764 36689888 -29978117 - MER5A DNA MER1_type -25 164 12 346 221 68 126 chr20 36690300 36690490 -29977515 - Charlie8 DNA MER1_type -2238 179 1 645 121 0 0 chr20 36691177 36691268 -29976737 + AluSp/q SINE Alu 208 298 -15 2069 97 3 26 chr20 36691325 36691635 -29976370 + AluSp SINE Alu 2 304 -9 670 226 18 12 chr20 36691776 36691940 -29976065 + L1ME1 LINE L1 5504 5668 -498 859 118 0 22 chr20 36691944 36692080 -29975925 + FLAM_C SINE Alu 1 133 -10 469 118 11 11 chr20 36692089 36692182 -29975823 + (TCTCCC)n Simple_repeat Simple_repeat 3 95 0 5832 65 26 12 chr20 36692191 36693169 -29974836 + SVA Other Other 2 866 -520 6542 60 27 33 chr20 36693186 36694185 -29973820 + SVA Other Other 433 1425 0 843 151 0 0 chr20 36694185 36694311 -29973694 + AluJb SINE Alu 148 273 -39 1565 207 90 49 chr20 36694320 36694788 -29973217 + L1ME1 LINE L1 5676 6162 -4 1036 215 15 89 chr20 36694971 36695141 -29972864 - AluJo SINE Alu 0 302 166 2237 96 0 3 chr20 36695141 36695442 -29972563 - AluSg SINE Alu -10 300 1 1036 215 15 89 chr20 36695442 36695596 -29972409 - AluJo SINE Alu -136 166 2 1563 140 3 120 chr20 36697293 36697635 -29970370 - AluJb SINE Alu 0 302 1 942 101 0 0 chr20 36698415 36698553 -29969452 + L1MA3 LINE L1 6168 6305 0 2045 116 142 36 chr20 36698792 36699179 -29968826 + MSTA LTR MaLR 1 428 0 296 295 56 14 chr20 36699222 36699328 -29968677 + MIR SINE MIR 13 121 -87 1463 208 25 59 chr20 36699338 36699742 -29968263 + MLT1C LTR MaLR 1 390 -77 301 274 65 59 chr20 36700519 36700672 -29967333 - MIR SINE MIR -13 249 96 2220 113 0 0 chr20 36700711 36701022 -29966983 - AluSx SINE Alu -1 311 1 303 259 176 0 chr20 36701022 36701107 -29966898 - L1M4 LINE L1 -2119 4027 3928 2162 81 14 0 chr20 36702049 36702334 -29965671 - AluSp SINE Alu -24 289 1 1469 156 88 3 chr20 36702941 36703224 -29964781 + AluJb SINE Alu 1 307 -5 204 279 0 0 chr20 36703228 36703271 -29964734 + C-rich Low_complexity Low_complexity 2 44 0 6177 110 17 25 chr20 36703271 36705032 -29962973 + SVA Other Other 1 1381 -5 219 36 0 0 chr20 36705182 36705210 -29962795 + (A)n Simple_repeat Simple_repeat 1 28 0 235 264 0 0 chr20 36705251 36705304 -29962701 + MER5A DNA MER1_type 1 53 -136 1794 125 24 3 chr20 36705304 36705593 -29962412 - AluSx SINE Alu -17 295 1 2386 60 10 3 chr20 36705600 36705902 -29962103 - AluSg SINE Alu -6 304 1 267 189 38 0 chr20 36705904 36705957 -29962048 + MER5A DNA MER1_type 128 182 -7 2071 103 0 20 chr20 36705987 36706287 -29961718 - AluSx SINE Alu -18 294 1 368 334 64 60 chr20 36706390 36706704 -29961301 - L3 LINE CR1 -213 1364 1050 1832 79 30 75 chr20 36707334 36707639 -29960366 - AluSq SINE Alu -17 296 6 1619 150 26 19 chr20 36707864 36708171 -29959834 + AluSg SINE Alu 2 310 0 1561 168 0 8 chr20 36708268 36708536 -29959469 + AluSx SINE Alu 2 267 -45 1954 133 7 0 chr20 36708900 36709193 -29958812 - AluJb SINE Alu -17 295 1 6548 204 33 30 chr20 36710114 36710660 -29957345 - L1M3 LINE L1 -641 5539 4996 1730 139 3 62 chr20 36710660 36710833 -29957172 - AluJb SINE Alu -21 291 142 2223 113 0 0 chr20 36710833 36711142 -29956863 - AluSx SINE Alu -3 309 1 1730 139 3 62 chr20 36711142 36711277 -29956728 - AluJb SINE Alu -170 142 1 6548 204 33 30 chr20 36711277 36712251 -29955754 - L1M3 LINE L1 -1184 4996 4006 1290 213 4 4 chr20 36712251 36712490 -29955515 - MER8 DNA MER2_type 0 239 1 6548 204 33 30 chr20 36712490 36712865 -29955140 - L1M3 LINE L1 -2174 4006 3634 791 231 6 0 chr20 36713162 36713322 -29954683 - FRAM SINE Alu -8 168 8 1924 138 7 0 chr20 36713333 36713630 -29954375 - AluSx SINE Alu -13 299 1 1556 185 3 13 chr20 36713658 36713966 -29954039 + AluJo SINE Alu 1 305 -7 657 193 17 0 chr20 36714206 36714325 -29953680 - FAM SINE Alu -45 140 20 1600 149 30 17 chr20 36714353 36714648 -29953357 - AluJo SINE Alu -9 303 5 2081 124 7 0 chr20 36714682 36714989 -29953016 - AluSc SINE Alu 0 309 1 2045 96 10 7 chr20 36714995 36715287 -29952718 - AluSg SINE Alu -16 294 2 2323 98 0 0 chr20 36715289 36715595 -29952410 - AluSx SINE Alu -6 306 1 23 0 0 0 chr20 36715781 36715804 -29952201 + AT_rich Low_complexity Low_complexity 1 23 0 885 233 170 12 chr20 36715912 36716185 -29951820 + AluSg SINE Alu 1 300 0 272 67 67 0 chr20 36716226 36716271 -29951734 + GA-rich Low_complexity Low_complexity 3 50 0 1765 163 3 3 chr20 36716364 36716652 -29951353 + AluJb SINE Alu 7 294 -18 288 0 0 0 chr20 36716888 36716920 -29951085 + (TG)n Simple_repeat Simple_repeat 1 32 0 2028 99 0 21 chr20 36716920 36717202 -29950803 - AluSc SINE Alu -33 276 1 1879 144 16 0 chr20 36717933 36718238 -29949767 + AluSx SINE Alu 1 310 -2 920 193 0 0 chr20 36718304 36718470 -29949535 - AluJb SINE Alu -9 303 138 193 214 0 24 chr20 36719096 36719138 -29948867 - MIR SINE MIR -10 252 212 28 71 0 0 chr20 36719290 36719346 -29948659 + AT_rich Low_complexity Low_complexity 1 56 0 2225 100 0 0 chr20 36719352 36719652 -29948353 - AluSx SINE Alu -12 300 1 10855 98 28 0 chr20 36719842 36721382 -29946623 - THE1A-int LTR MaLR 0 1580 1 2755 73 3 0 chr20 36721384 36721727 -29946278 - THE1A LTR MaLR -11 344 1 11482 102 14 12 chr20 36722182 36723910 -29944095 - L1P3 LINE L1 -2532 3929 2198 5799 111 8 0 chr20 36723913 36724712 -29943293 - L1P3 LINE L1 -5642 819 15 2853 148 19 32 chr20 36726282 36726809 -29941196 + L1MB4 LINE L1 5661 6180 0 416 79 48 0 chr20 36727497 36727560 -29940445 - Alu SINE Alu -243 67 2 1910 173 0 0 chr20 36728152 36728447 -29939558 - AluJb SINE Alu -17 295 1 2115 141 0 3 chr20 36728939 36729243 -29938762 - AluSx SINE Alu -9 303 1 2845 3 0 0 chr20 36729598 36729898 -29938107 - AluYa8 SINE Alu -10 300 1 3289 229 86 0 chr20 36729901 36730819 -29937186 - L1 LINE L1 -1092 5054 4015 719 139 96 0 chr20 36730920 36731035 -29936970 - AluSx SINE Alu -150 162 37 3116 154 11 6 chr20 36731035 36731568 -29936437 - MSTA-int LTR MaLR -1115 536 1 2150 125 135 23 chr20 36731568 36731882 -29936123 - MSTA LTR MaLR 0 428 62 1332 218 106 24 chr20 36731882 36732212 -29935793 + LTR18A LTR ERVL 1 357 0 2150 125 135 23 chr20 36732212 36732282 -29935723 - MSTA LTR MaLR -366 62 1 2732 145 37 29 chr20 36732456 36732520 -29935485 - LOR1a LTR ERV1 0 497 435 2311 112 3 6 chr20 36732520 36732833 -29935172 + AluSq SINE Alu 2 313 0 2732 145 37 29 chr20 36732833 36733250 -29934755 - LOR1a LTR ERV1 -62 435 12 294 59 0 0 chr20 36733250 36733284 -29934721 - LOR1a LTR ERV1 -463 34 1 317 125 0 54 chr20 36733284 36733340 -29934665 - LOR1a-int LTR ERV1 0 8120 8068 2279 122 0 3 chr20 36733343 36733654 -29934351 - AluSx SINE Alu -2 310 1 5489 140 20 32 chr20 36733723 36734426 -29933579 - LOR1a-int LTR ERV1 -145 7060 6369 2343 82 28 0 chr20 36734426 36734717 -29933288 + AluSx SINE Alu 1 299 -13 5489 140 20 32 chr20 36734717 36734907 -29933098 - LOR1a-int LTR ERV1 -836 6369 6178 2457 83 0 13 chr20 36734907 36735220 -29932785 + AluY SINE Alu 1 309 -2 5383 271 75 63 chr20 36735220 36736230 -29931775 - MER50-int LTR ERV1 -3836 3369 2372 2270 123 0 0 chr20 36736230 36736531 -29931474 + AluSx SINE Alu 1 301 -11 5383 271 75 63 chr20 36736531 36737057 -29930948 - MER50-int LTR ERV1 -4833 2372 1854 2362 69 17 0 chr20 36737057 36737346 -29930659 + AluY SINE Alu 2 295 -16 5383 271 75 63 chr20 36737346 36737885 -29930120 - MER50-int LTR ERV1 -5351 1854 1263 2277 93 0 0 chr20 36737885 36738176 -29929829 - AluSc SINE Alu -18 291 1 5383 271 75 63 chr20 36738176 36738290 -29929715 - MER50-int LTR ERV1 -5942 1263 1152 1085 165 0 0 chr20 36738291 36738455 -29929550 + AluSx SINE Alu 1 164 -148 2112 136 0 0 chr20 36738657 36738952 -29929053 + AluSg SINE Alu 1 295 -15 1924 145 17 3 chr20 36739540 36739836 -29928169 + AluJo SINE Alu 1 300 -12 182 229 311 0 chr20 36739839 36739900 -29928105 + MIR SINE MIR 28 107 -155 428 173 27 0 chr20 36740017 36740092 -29927913 - AluJ/FLAM SINE Alu -234 78 2 2230 130 0 0 chr20 36740407 36740708 -29927297 - AluSx SINE Alu -11 301 1 9840 19 10 223 chr20 36740829 36742579 -29925426 + SVA Other Other 9 1386 0 1544 187 34 10 chr20 36743051 36743345 -29924660 - AluJo SINE Alu -4 308 8 1585 136 136 4 chr20 36743490 36743754 -29924251 + AluJb SINE Alu 1 299 -13 2459 97 0 0 chr20 36743754 36744065 -29923940 + AluSq SINE Alu 1 311 -2 2401 85 0 0 chr20 36744396 36744701 -29923304 - AluY SINE Alu -4 307 3 2101 112 11 0 chr20 36744706 36744993 -29923012 - AluSg SINE Alu -19 291 2 2456 98 0 0 chr20 36744995 36745301 -29922704 - AluSx SINE Alu -6 306 1 23 0 0 0 chr20 36745487 36745510 -29922495 + AT_rich Low_complexity Low_complexity 1 23 0 864 229 170 12 chr20 36745618 36745891 -29922114 + AluSg SINE Alu 1 300 0 311 129 43 0 chr20 36745932 36746002 -29922003 + GA-rich Low_complexity Low_complexity 3 75 0 1887 170 3 3 chr20 36746064 36746358 -29921647 + AluJb SINE Alu 1 294 -18 288 0 0 0 chr20 36746594 36746626 -29921379 + (TG)n Simple_repeat Simple_repeat 1 32 0 2152 99 0 21 chr20 36746626 36746908 -29921097 - AluSc SINE Alu -33 276 1 1940 136 18 0 chr20 36747643 36747960 -29920045 + AluSx SINE Alu 1 322 0 982 193 0 0 chr20 36748014 36748180 -29919825 - AluJb SINE Alu -9 303 138 28 71 0 0 chr20 36749000 36749056 -29918949 + AT_rich Low_complexity Low_complexity 1 56 0 2354 100 0 0 chr20 36749062 36749362 -29918643 - AluSx SINE Alu -12 300 1 2296 92 7 10 chr20 36750411 36750714 -29917291 - AluSc SINE Alu -7 302 1 1910 173 0 0 chr20 36751305 36751600 -29916405 - AluJb SINE Alu -17 295 1 2115 141 0 3 chr20 36752092 36752396 -29915609 - AluSx SINE Alu -9 303 1 2135 111 3 23 chr20 36752751 36753058 -29914947 - AluSx SINE Alu -11 301 1 957 255 136 60 chr20 36754108 36754213 -29913792 + MLT1J LTR MaLR 17 113 -398 1915 168 0 0 chr20 36754213 36754511 -29913494 + AluJb SINE Alu 3 300 -12 957 255 136 60 chr20 36754511 36754720 -29913285 + MLT1J LTR MaLR 113 373 -138 2322 88 3 3 chr20 36754720 36755015 -29912990 - AluY SINE Alu -16 295 1 957 255 136 60 chr20 36755015 36755118 -29912887 + MLT1J LTR MaLR 373 467 -44 2390 92 0 0 chr20 36755398 36755691 -29912314 + AluSg SINE Alu 2 294 -16 2179 119 6 13 chr20 36755697 36756008 -29911997 + AluSc SINE Alu 1 309 0 1711 149 30 17 chr20 36756038 36756333 -29911672 + AluJo SINE Alu 5 303 -9 652 193 17 0 chr20 36756361 36756480 -29911525 + FAM SINE Alu 20 140 -45 1669 185 3 13 chr20 36756720 36757028 -29910977 - AluJo SINE Alu -7 305 1 2046 138 7 0 chr20 36757056 36757353 -29910652 + AluSx SINE Alu 1 299 -13 790 231 6 0 chr20 36757364 36757524 -29910481 + FRAM SINE Alu 8 168 -8 6696 182 39 55 chr20 36757821 36758196 -29909809 + L1MB3 LINE L1 3634 4013 -2170 1295 213 4 4 chr20 36758196 36758435 -29909570 + MER8 DNA MER2_type 1 239 0 6696 182 39 55 chr20 36758435 36759411 -29908594 + L1MB3 LINE L1 4013 5003 -1180 1845 139 3 62 chr20 36759411 36759546 -29908459 + AluJb SINE Alu 1 142 -170 2351 113 0 0 chr20 36759546 36759855 -29908150 + AluSx SINE Alu 1 309 -3 1845 139 3 62 chr20 36759855 36760028 -29907977 + AluJb SINE Alu 142 291 -21 6696 182 39 55 chr20 36760028 36760715 -29907290 + L1MB3 LINE L1 5003 5630 -553 1722 181 0 30 chr20 36760715 36761019 -29906986 - AluJb SINE Alu -15 297 3 6696 182 39 55 chr20 36761019 36761547 -29906458 + L1MB3 LINE L1 5630 6165 -18 1723 183 3 7 chr20 36761989 36762159 -29905846 - AluJb SINE Alu -10 302 132 2306 84 14 7 chr20 36762159 36762456 -29905549 - AluY SINE Alu -12 299 1 1723 183 3 7 chr20 36762456 36762586 -29905419 - AluJb SINE Alu -180 132 3 2183 110 7 17 chr20 36762588 36762889 -29905116 - AluSx SINE Alu -13 299 2 1929 161 16 3 chr20 36762904 36763209 -29904796 - AluJo SINE Alu -2 310 2 1267 179 21 4 chr20 36763450 36763684 -29904321 + AluJb SINE Alu 73 310 -2 32 0 0 0 chr20 36763716 36763748 -29904257 + AT_rich Low_complexity Low_complexity 1 32 0 1754 146 30 27 chr20 36763767 36764095 -29903910 + L1MC1 LINE L1 6005 6333 0 24 0 0 0 chr20 36764483 36764507 -29903498 + AT_rich Low_complexity Low_complexity 1 24 0 223 282 273 0 chr20 36764540 36764650 -29903355 - L2 LINE L2 0 3272 3133 1973 124 42 0 chr20 36765256 36765539 -29902466 - AluSx SINE Alu -17 295 1 2668 58 0 0 chr20 36765590 36765898 -29902107 - AluY SINE Alu -3 308 1 1249 171 69 97 chr20 36766284 36766654 -29901351 + Tigger6 DNA MER2_type 1173 1552 -45 1996 115 3 40 chr20 36766654 36766958 -29901047 - AluSg SINE Alu -17 293 1 2262 119 3 0 chr20 36766962 36767265 -29900740 - AluSx SINE Alu -8 304 1 2229 111 0 0 chr20 36767275 36767572 -29900433 - AluSg1 SINE Alu -12 297 1 2445 89 0 0 chr20 36767572 36767876 -29900129 - AluSx SINE Alu -8 304 1 1249 171 69 97 chr20 36767876 36767922 -29900083 + Tigger6 DNA MER2_type 1562 1594 -3 2867 77 3 3 chr20 36768324 36768688 -29899317 + THE1B LTR MaLR 1 364 0 501 201 67 75 chr20 36768709 36768843 -29899162 - FLAM_A SINE Alu 0 133 1 29 47 0 0 chr20 36768889 36768932 -29899073 + AT_rich Low_complexity Low_complexity 1 43 0 2187 133 0 3 chr20 36769326 36769626 -29898379 - AluSx SINE Alu -13 299 1 382 162 67 38 chr20 36769783 36769888 -29898117 - MIR SINE MIR -83 179 72 2210 119 0 10 chr20 36770281 36770591 -29897414 - AluSx SINE Alu 0 312 6 4865 145 29 76 chr20 36770681 36770800 -29897205 + L1MB8 LINE L1 5083 5206 -972 330 95 0 0 chr20 36770800 36770842 -29897163 + AluY SINE Alu 1 42 -260 1799 84 0 4 chr20 36770843 36771069 -29896936 + AluY SINE Alu 80 304 -7 4865 145 29 76 chr20 36771069 36771602 -29896403 + L1MB8 LINE L1 5206 5762 -416 2004 118 14 27 chr20 36771602 36771899 -29896106 + AluJb SINE Alu 9 301 -11 4865 145 29 76 chr20 36771899 36772000 -29896005 + L1MB8 LINE L1 5762 5866 -312 1079 186 26 150 chr20 36772001 36772173 -29895832 + AluJo SINE Alu 2 113 -189 4865 145 29 76 chr20 36772095 36772173 -29895832 + L1MB8 LINE L1 5866 5946 -232 2089 103 3 41 chr20 36772173 36772493 -29895512 + AluSg1 SINE Alu 1 308 -1 4865 145 29 76 chr20 36772493 36773005 -29895000 + L1MB8 LINE L1 5946 6169 -9 1079 186 26 150 chr20 36772493 36772659 -29895346 + AluJo SINE Alu 113 298 -4 22 0 0 0 chr20 36773007 36773029 -29894976 + AT_rich Low_complexity Low_complexity 1 22 0 2374 88 3 3 chr20 36773305 36773612 -29894393 - AluSq SINE Alu -6 307 1 2219 99 0 0 chr20 36774045 36774379 -29893626 - AluY SINE Alu 0 334 1 834 125 8 23 chr20 36774445 36774573 -29893432 + FLAM_C SINE Alu 1 126 -17 856 208 0 0 chr20 36775377 36775526 -29892479 - FRAM SINE Alu -17 159 11 2104 132 0 16 chr20 36775583 36775886 -29892119 - AluSq SINE Alu -15 298 1 2132 142 0 0 chr20 36776671 36776982 -29891023 + AluSx SINE Alu 1 311 -1 573 308 135 58 chr20 36777155 36777756 -29890249 + HAL1 LINE L1 262 908 -1599 724 182 0 23 chr20 36777760 36777892 -29890113 + FLAM_A SINE Alu 5 133 0 2253 115 3 3 chr20 36777893 36778205 -29889800 + AluSx SINE Alu 1 312 0 28 61 0 0 chr20 36778692 36778741 -29889264 + AT_rich Low_complexity Low_complexity 1 49 0 2359 103 3 0 chr20 36778754 36779066 -29888939 + AluSp SINE Alu 1 313 0 1288 237 87 45 chr20 36779132 36779235 -29888770 + HAL1 LINE L1 1036 1133 -1374 2556 68 0 7 chr20 36779235 36779545 -29888460 + AluY SINE Alu 1 308 -3 1288 237 87 45 chr20 36779545 36779973 -29888032 + HAL1 LINE L1 1133 1589 -918 720 127 6 162 chr20 36779973 36780146 -29887859 - FAM SINE Alu 0 49 1 1954 133 17 10 chr20 36780153 36780454 -29887551 - AluSq SINE Alu -10 303 1 265 222 86 0 chr20 36780461 36780542 -29887463 + HAL1 LINE L1 1576 1663 -844 * 272 185 0 0 chr20 36780539 36780593 -29887412 + L1MDa LINE L1 2243 2296 -4244 1974 192 59 42 chr20 36780637 36780991 -29887014 + L1MDa LINE L1 2419 2766 -3774 2323 109 0 10 chr20 36780991 36781304 -29886701 - AluSg SINE Alu 0 310 1 2084 104 0 57 chr20 36781307 36781490 -29886515 - AluSx SINE Alu -14 298 139 2143 133 0 0 chr20 36781490 36781783 -29886222 - AluSx SINE Alu -19 293 1 2084 104 0 57 chr20 36781783 36781915 -29886090 - AluSx SINE Alu -173 139 1 1974 192 59 42 chr20 36781915 36782200 -29885805 + L1MDa LINE L1 2767 3077 -3463 2903 174 84 7 chr20 36782200 36782762 -29885243 + MER6A DNA MER2_type 1 605 0 1974 192 59 42 chr20 36782762 36782870 -29885135 + L1MDa LINE L1 3077 3182 -3358 231 240 144 58 chr20 36782894 36782998 -29885007 + L1MD2 LINE L1 6010 6122 -237 270 0 0 0 chr20 36783002 36783032 -29884973 + (CA)n Simple_repeat Simple_repeat 2 31 0 627 208 56 7 chr20 36783032 36783176 -29884829 + L1MD1 LINE L1 6081 6231 -11 2208 107 0 13 chr20 36783176 36783485 -29884520 + AluSg1 SINE Alu 1 305 -4 531 321 41 21 chr20 36783501 36783521 -29884484 + HAL1 LINE L1 1656 1674 -833 2265 109 0 0 chr20 36783521 36783815 -29884190 + AluSx SINE Alu 1 294 -18 531 321 41 21 chr20 36783815 36784037 -29883968 + HAL1 LINE L1 1674 1903 -604 198 0 0 0 chr20 36784283 36784305 -29883700 + (A)n Simple_repeat Simple_repeat 1 22 0 2027 116 45 0 chr20 36784740 36785032 -29882973 + AluSq SINE Alu 1 305 -8 2378 110 0 0 chr20 36785316 36785626 -29882379 - AluSg SINE Alu 0 310 1 21 0 0 0 chr20 36785731 36785752 -29882253 + AT_rich Low_complexity Low_complexity 1 21 0 3387 170 30 50 chr20 36785777 36785966 -29882039 - L1MB1 LINE L1 -206 5962 5771 543 69 0 0 chr20 36785966 36786038 -29881967 + (CCTA)n Simple_repeat Simple_repeat 4 75 0 3387 170 30 50 chr20 36786038 36786680 -29881325 - L1MB1 LINE L1 -397 5771 5150 927 136 8 0 chr20 36786682 36786814 -29881191 + AluSq/x SINE Alu 3 135 -177 2099 101 36 13 chr20 36786814 36787120 -29880885 + AluSp SINE Alu 1 313 0 2245 112 3 0 chr20 36787221 36787517 -29880488 + AluSc SINE Alu 13 309 0 816 191 0 0 chr20 36787537 36787678 -29880327 - FLAM_C SINE Alu -2 141 1 379 135 34 56 chr20 36787680 36787733 -29880272 - L1MB1 LINE L1 -1583 4563 4511 1564 165 114 7 chr20 36787733 36788006 -29879999 - AluJb SINE Alu -9 303 2 379 135 34 56 chr20 36788006 36788041 -29879964 - L1MB1 LINE L1 -1635 4511 4477 2427 67 3 0 chr20 36788864 36789187 -29878818 + AluSp SINE Alu 1 324 0 26 0 0 0 chr20 36789302 36789328 -29878677 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr20 36789444 36789465 -29878540 + AT_rich Low_complexity Low_complexity 1 21 0 2028 130 13 7 chr20 36789476 36789776 -29878229 + AluJb SINE Alu 1 302 -10 356 234 103 19 chr20 36789779 36789886 -29878119 - FLAM_A SINE Alu -17 116 1 268 331 50 12 chr20 36790407 36790567 -29877438 - MIR SINE MIR -50 212 47 711 100 0 0 chr20 36791545 36791645 -29876360 + AluSc SINE Alu 206 305 -4 2436 35 0 85 chr20 36791647 36791965 -29876040 + AluY SINE Alu 1 291 -20 1487 155 136 8 chr20 36792057 36792315 -29875690 - AluSg SINE Alu -8 292 2 877 188 99 143 chr20 36792340 36792487 -29875518 + AluSx SINE Alu 1 153 -149 2293 107 0 7 chr20 36792487 36792785 -29875220 - AluSx SINE Alu -16 296 1 2080 149 3 3 chr20 36792787 36793096 -29874909 - AluJb SINE Alu -3 309 1 2217 113 3 10 chr20 36793100 36793411 -29874594 - AluSc SINE Alu 0 309 1 877 188 99 143 chr20 36793411 36793569 -29874436 + AluSx SINE Alu 157 300 -2 2189 96 0 58 chr20 36793586 36793899 -29874106 - AluSx SINE Alu -17 295 1 2068 154 0 3 chr20 36793901 36794206 -29873799 - AluJb SINE Alu -8 304 1 1684 141 116 11 chr20 36794610 36794887 -29873118 - AluJb SINE Alu -6 306 1 2200 118 10 3 chr20 36796460 36796765 -29871240 + AluSx SINE Alu 1 307 -5 1080 198 29 5 chr20 36797270 36797477 -29870528 + AluJb SINE Alu 89 300 -12 22 0 0 0 chr20 36797493 36797515 -29870490 + AT_rich Low_complexity Low_complexity 1 22 0 560 63 13 13 chr20 36797724 36797803 -29870202 + AluSp SINE Alu 59 137 -176 10004 31 10 182 chr20 36797806 36799467 -29868538 + SVA Other Other 13 1386 0 436 203 0 0 chr20 36799668 36799742 -29868263 - AluSg/x SINE Alu -43 269 196 2170 126 3 0 chr20 36799875 36800168 -29867837 - AluSx SINE Alu -18 294 1 2207 138 57 41 chr20 36800290 36800347 -29867658 + MSTB LTR MaLR 1 56 -370 1725 185 27 0 chr20 36800347 36800639 -29867366 + AluJb SINE Alu 1 300 -12 2207 138 57 41 chr20 36800639 36801000 -29867005 + MSTB LTR MaLR 56 426 0 1809 83 4 0 chr20 36801160 36801388 -29866617 + AluSp SINE Alu 1 229 -84 706 68 0 0 chr20 36801400 36801488 -29866517 + AluSp SINE Alu 208 295 -18 304 364 10 0 chr20 36801581 36801680 -29866325 + LTR67 LTR ERVL 119 218 -339 1120 183 0 33 chr20 36801936 36802149 -29865856 - AluJb SINE Alu -23 289 84 2126 159 0 0 chr20 36802390 36802699 -29865306 + AluJo SINE Alu 2 310 -2 664 213 0 8 chr20 36802714 36802836 -29865169 + FLAM_A SINE Alu 4 124 -9 2051 66 0 19 chr20 36802841 36803100 -29864905 + AluY SINE Alu 44 297 -14 1982 154 0 3 chr20 36803109 36803407 -29864598 + AluJo SINE Alu 6 302 -10 1104 173 133 4 chr20 36803425 36803651 -29864354 + L1MB7 LINE L1 5354 5608 -576 1070 128 0 13 chr20 36803652 36803802 -29864203 + AluSg/x SINE Alu 137 285 -22 3050 136 62 7 chr20 36803802 36804354 -29863651 + L1MB7 LINE L1 5594 6175 -9 2291 102 3 0 chr20 36804434 36804728 -29863277 - AluSx SINE Alu -17 295 1 477 220 71 14 chr20 36804729 36804870 -29863135 + L1MB2 LINE L1 5549 5697 -424 284 246 78 42 chr20 36805107 36805138 -29862867 - L1MC4a LINE L1 -1875 5933 5905 2123 210 48 24 chr20 36805138 36805675 -29862330 - MER44D DNA MER2_type 0 605 1 284 246 78 42 chr20 36805675 36805785 -29862220 - L1MC4a LINE L1 -1903 5905 5787 3146 174 91 50 chr20 36805808 36805910 -29862095 - L1MC4 LINE L1 0 8042 7946 2138 107 3 10 chr20 36805910 36806210 -29861795 - AluSg SINE Alu -12 298 1 3146 174 91 50 chr20 36806210 36806248 -29861757 - L1MC4 LINE L1 -96 7946 7911 1826 193 31 54 chr20 36806248 36806672 -29861333 + MLT2D LTR ERVL 1 414 0 3146 174 91 50 chr20 36806672 36807440 -29860565 - L1MC4 LINE L1 -131 7911 7095 522 242 39 39 chr20 36807455 36807608 -29860397 - L1MC4 LINE L1 -1069 6973 6821 * 847 164 6 18 chr20 36807599 36807764 -29860241 + L1MB2 LINE L1 5856 6018 -153 731 135 35 71 chr20 36807775 36807916 -29860089 - LTR24B LTR ERV1 -170 406 271 1507 155 18 36 chr20 36807917 36808195 -29859810 + AluJb SINE Alu 29 301 -11 363 169 46 0 chr20 36808374 36808439 -29859566 - MER31-int LTR ERV1 -239 4697 4630 1938 112 6 68 chr20 36808439 36808761 -29859244 - AluJo SINE Alu -10 302 1 1627 191 26 15 chr20 36808761 36809102 -29858903 - MER31-int LTR ERV1 -478 5853 5509 1718 161 7 4 chr20 36809120 36809399 -29858606 - AluSx SINE Alu -1 311 32 2162 128 0 0 chr20 36809436 36809732 -29858273 - AluSx SINE Alu -16 296 1 2009 143 25 6 chr20 36809734 36810056 -29857949 - MER31-int LTR ERV1 -813 5518 5191 767 138 11 76 chr20 36810279 36810329 -29857676 - MER31-int LTR ERV1 -1102 3834 3782 1503 153 6 86 chr20 36810329 36810656 -29857349 + AluJo SINE Alu 6 306 -6 767 138 11 76 chr20 36810656 36810763 -29857242 - MER31-int LTR ERV1 -1154 3782 3721 489 169 155 7 chr20 36811286 36811428 -29856577 + L1MB3 LINE L1 6007 6169 -14 204 97 0 0 chr20 36811442 36811473 -29856532 + (CA)n Simple_repeat Simple_repeat 1 31 0 1200 151 30 0 chr20 36811488 36811687 -29856318 - MER2 DNA MER2_type -1 344 140 1826 167 0 26 chr20 36811688 36811999 -29856006 + AluJb SINE Alu 1 303 -9 2028 152 0 3 chr20 36812159 36812468 -29855537 + AluSx SINE Alu 1 308 -4 1905 122 3 64 chr20 36812478 36812790 -29855215 + AluSg SINE Alu 1 293 -17 1761 170 31 0 chr20 36812885 36813173 -29854832 - AluJb SINE Alu -15 297 1 328 296 130 25 chr20 36813193 36813470 -29854535 + L1MC4a LINE L1 5628 5933 -1875 1392 160 13 0 chr20 36813475 36813700 -29854305 + AluJb SINE Alu 84 311 -1 2089 126 3 7 chr20 36813747 36814040 -29853965 - AluSq SINE Alu -21 292 1 2265 110 0 13 chr20 36814092 36814409 -29853596 - AluSq SINE Alu 0 313 1 702 118 67 8 chr20 36814488 36814607 -29853398 - L1MB3 LINE L1 -11 6172 6047 2266 90 27 13 chr20 36814621 36814922 -29853083 - AluY SINE Alu -6 305 1 831 83 0 18 chr20 36814925 36815034 -29852971 - AluSg/x SINE Alu -20 292 186 1678 101 186 4 chr20 36815278 36815536 -29852469 + AluSq SINE Alu 1 305 -8 484 274 44 22 chr20 36815791 36816017 -29851988 + L1MC4 LINE L1 7310 7540 -502 2256 98 3 0 chr20 36816032 36816319 -29851686 + AluSg SINE Alu 5 292 -18 1310 200 0 16 chr20 36816319 36816569 -29851436 + AluJo SINE Alu 45 290 -22 1390 222 39 66 chr20 36816591 36816956 -29851049 + L1MC4 LINE L1 7535 7825 -170 2392 96 3 3 chr20 36816956 36817269 -29850736 + AluSp SINE Alu 1 313 0 1390 222 39 66 chr20 36817269 36817436 -29850569 + L1MC4 LINE L1 7825 7995 0 1889 132 0 35 chr20 36817551 36817881 -29850124 + AluSx SINE Alu 8 327 0 340 250 139 15 chr20 36818148 36818317 -29849688 - MIR3 SINE MIR -40 168 3 1574 166 32 51 chr20 36818342 36818655 -29849350 + AluJo SINE Alu 1 307 -5 1552 160 32 102 chr20 36818683 36818759 -29849246 + MER7A DNA MER2_type 1 81 -2957 1715 151 58 4 chr20 36818759 36819037 -29848968 + AluSx SINE Alu 2 294 -18 1552 160 32 102 chr20 36819037 36819334 -29848671 + MER7A DNA MER2_type 81 346 0 1198 156 268 7 chr20 36819595 36819871 -29848134 - MER7A DNA MER2_type 0 346 1 2267 97 3 7 chr20 36820049 36820349 -29847656 + AluSx SINE Alu 1 299 -13 1644 187 13 3 chr20 36820360 36820659 -29847346 + AluJo SINE Alu 1 302 -10 1194 205 0 0 chr20 36820936 36821141 -29846864 + AluJo SINE Alu 3 207 -105 1749 127 28 99 chr20 36821311 36821633 -29846372 - AluJb SINE Alu -13 299 1 1003 110 0 0 chr20 36821638 36821765 -29846240 - FLAM_C SINE Alu -16 127 1 1593 200 11 4 chr20 36822333 36822613 -29845392 + AluJo SINE Alu 1 282 -30 * 2021 117 13 7 chr20 36822609 36822916 -29845089 - AluSq SINE Alu -4 309 1 1488 197 9 34 chr20 36822898 36822959 -29845046 + AluJo SINE Alu 7 312 0 245 339 61 9 chr20 36823033 36823148 -29844857 - L2 LINE L2 -287 2985 2865 1890 131 10 7 chr20 36823614 36823911 -29844094 - AluSx SINE Alu -14 298 1 326 272 14 25 chr20 36824220 36824340 -29843665 + MIR SINE MIR 25 147 -62 184 245 75 0 chr20 36824543 36824596 -29843409 + MIR3 SINE MIR 109 165 -43 2949 136 75 51 chr20 36825625 36826175 -29841830 + MER51A LTR ERV1 1 563 -71 1546 171 0 25 chr20 36826176 36826457 -29841548 + AluSx SINE Alu 21 294 -18 2344 91 0 0 chr20 36826618 36826927 -29841078 + AluSc SINE Alu 1 309 0 225 0 0 0 chr20 36827355 36827380 -29840625 + (A)n Simple_repeat Simple_repeat 1 25 0 2127 105 0 20 chr20 36827423 36827729 -29840276 - AluSx SINE Alu -12 300 1 336 259 23 52 chr20 36827849 36827925 -29840080 + L1MC/D LINE L1 5318 5395 -2413 2002 92 3 14 chr20 36827925 36828243 -29839762 - AluSc SINE Alu 0 309 1 336 259 23 52 chr20 36828243 36828340 -29839665 + L1MC/D LINE L1 5395 5486 -2322 385 240 60 47 chr20 36828343 36828493 -29839512 + L2 LINE L2 2743 2894 -420 2217 96 0 10 chr20 36828658 36828960 -29839045 + AluSx SINE Alu 1 299 -13 2059 124 10 0 chr20 36829462 36829760 -29838245 - AluSg SINE Alu -9 301 1 1833 155 3 3 chr20 36829860 36830157 -29837848 + AluJb SINE Alu 1 297 -15 743 183 0 22 chr20 36830275 36830412 -29837593 + FLAM_C SINE Alu 2 135 -8 237 386 62 4 chr20 36830475 36830716 -29837289 - MIR SINE MIR -6 256 2 784 205 84 0 chr20 36830964 36831130 -29836875 + FRAM SINE Alu 1 176 0 2170 101 7 0 chr20 36831137 36831434 -29836571 - AluSx SINE Alu -13 299 1 26 50 0 0 chr20 36832136 36832176 -29835829 + AT_rich Low_complexity Low_complexity 1 40 0 2159 125 0 0 chr20 36832188 36832499 -29835506 - AluSx SINE Alu 0 312 2 609 263 99 48 chr20 36832509 36832787 -29835218 - L1ME4a LINE L1 -4 6117 5854 1578 179 0 24 chr20 36832787 36833107 -29834898 + AluJb SINE Alu 1 312 0 609 263 99 48 chr20 36833107 36833135 -29834870 - L1ME4a LINE L1 -267 5854 5829 2103 133 28 6 chr20 36833135 36833354 -29834651 - MER46B DNA MER2_type -2495 236 130 333 118 0 0 chr20 36833363 36833414 -29834591 + (TG)n Simple_repeat Simple_repeat 2 52 0 2000 88 39 14 chr20 36833414 36833687 -29834318 - AluSx SINE Alu -29 283 1 2103 133 28 6 chr20 36833687 36833820 -29834185 - MER46B DNA MER2_type -2601 130 1 609 263 99 48 chr20 36833820 36833987 -29834018 - L1ME4a LINE L1 -292 5829 5619 1389 75 38 0 chr20 36833987 36834173 -29833832 + AluSg SINE Alu 1 193 -117 1648 108 129 21 chr20 36834173 36834452 -29833553 - AluSg1 SINE Alu 0 309 1 374 294 61 29 chr20 36834506 36834819 -29833186 - L1ME4a LINE L1 -727 5443 5088 2030 123 3 19 chr20 36834826 36835143 -29832862 - AluSx SINE Alu 0 312 1 252 77 0 0 chr20 36835337 36835376 -29832629 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1786 92 95 0 chr20 36835378 36835640 -29832365 - AluSx SINE Alu -25 287 1 1029 171 16 0 chr20 36835847 36836083 -29831922 - AluJ SINE Alu 0 358 120 2028 105 3 0 chr20 36836099 36836384 -29831621 + AluSx SINE Alu 1 286 -26 233 214 0 0 chr20 36836384 36836426 -29831579 + (CATA)n Simple_repeat Simple_repeat 3 44 0 836 133 0 0 chr20 36836426 36836546 -29831459 - AluJ SINE Alu -192 120 1 2279 97 0 0 chr20 36836789 36837098 -29830907 + AluSx SINE Alu 1 309 -3 1606 178 7 14 chr20 36837877 36838164 -29829841 + AluJo SINE Alu 1 285 -27 1990 115 0 14 chr20 36838226 36838362 -29829643 + AluSq SINE Alu 1 137 -180 2099 89 17 3 chr20 36838362 36838664 -29829341 + AluSq SINE Alu 1 306 -7 1990 115 0 14 chr20 36838664 36838848 -29829157 + AluSq SINE Alu 137 317 0 2376 60 0 7 chr20 36838855 36839155 -29828850 + AluY SINE Alu 1 298 -13 2123 101 0 16 chr20 36839773 36840080 -29827925 - AluSg SINE Alu -8 302 1 239 136 18 7 chr20 36840196 36840424 -29827581 + AluSx SINE Alu 1 296 -4 1996 136 0 0 chr20 36841458 36841753 -29826252 - AluSx SINE Alu -17 295 1 232 170 170 0 chr20 36842318 36842365 -29825640 + L1P4 LINE L1 5535 5589 -576 1915 124 18 0 chr20 36842502 36842784 -29825221 + AluSx SINE Alu 1 287 -25 258 32 0 0 chr20 36842796 36842827 -29825178 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 * 327 78 0 0 chr20 36842826 36842877 -29825128 + (TATG)n Simple_repeat Simple_repeat 2 52 0 2197 89 0 0 chr20 36843270 36843552 -29824453 + AluSx SINE Alu 1 282 -30 506 342 77 4 chr20 36844420 36844680 -29823325 + L3 LINE CR1 1198 1476 -101 1869 143 35 48 chr20 36844681 36844856 -29823149 + THE1C LTR MaLR 1 177 -198 1957 138 0 22 chr20 36844856 36844992 -29823013 + AluSx SINE Alu 1 138 -174 2123 116 10 0 chr20 36844992 36845295 -29822710 + AluSp SINE Alu 1 306 -7 1957 138 0 22 chr20 36845295 36845477 -29822528 + AluSx SINE Alu 138 312 0 1869 143 35 48 chr20 36845477 36845673 -29822332 + THE1C LTR MaLR 177 367 -8 2053 124 13 0 chr20 36845946 36846245 -29821760 - AluSx SINE Alu -9 303 1 23 0 0 0 chr20 36846247 36846270 -29821735 + AT_rich Low_complexity Low_complexity 1 23 0 916 153 0 19 chr20 36846278 36846435 -29821570 + FRAM SINE Alu 13 166 -10 870 78 4 2 chr20 36846437 36846696 -29821309 + AluY SINE Alu 1 309 -2 1793 145 0 33 chr20 36846727 36847031 -29820974 + AluSx SINE Alu 9 302 -10 2217 96 3 7 chr20 36847357 36847660 -29820345 - AluSp SINE Alu -11 302 1 2179 105 0 0 chr20 36847664 36847960 -29820045 - AluSg SINE Alu -14 296 1 1794 183 0 0 chr20 36848159 36848646 -29819359 + AluJb SINE Alu 1 487 0 2222 90 10 6 chr20 36849033 36849344 -29818661 - AluSx SINE Alu 0 312 1 182 146 0 24 chr20 36850153 36850194 -29817811 + (TTC)n Simple_repeat Simple_repeat 2 41 0 2239 105 0 0 chr20 36850200 36850506 -29817499 - AluSx SINE Alu -6 306 1 229 0 0 0 chr20 36850513 36850539 -29817466 - HY1 scRNA scRNA -1 111 86 1489 194 0 44 chr20 36850744 36850931 -29817074 - AluJo SINE Alu -7 305 136 1678 163 32 0 chr20 36850931 36851213 -29816792 - AluJb SINE Alu -21 291 1 1489 194 0 44 chr20 36851213 36851344 -29816661 - AluJo SINE Alu -176 136 1 1266 146 5 5 chr20 36851418 36851637 -29816368 + AluJo SINE Alu 87 305 -7 571 224 60 51 chr20 36851637 36851813 -29816192 - MIR3 SINE MIR -26 182 1 2148 105 3 0 chr20 36851881 36852167 -29815838 - AluSx SINE Alu -25 287 1 2132 106 0 7 chr20 36852912 36853205 -29814800 + AluSx SINE Alu 1 291 -21 524 293 63 29 chr20 36853294 36853398 -29814607 + MER5A DNA MER1_type 9 123 -66 2350 84 0 0 chr20 36853398 36853709 -29814296 - AluY SINE Alu 0 311 1 524 293 63 29 chr20 36853709 36853778 -29814227 + MER5A DNA MER1_type 123 188 -1 1844 137 7 3 chr20 36853844 36854136 -29813869 + AluJb SINE Alu 1 293 -19 5827 64 17 84 chr20 36854155 36856115 -29811890 + SVA Other Other 1 1377 -9 2576 35 3 0 chr20 36856115 36856425 -29811580 + AluY SINE Alu 1 311 0 697 104 61 0 chr20 36856507 36856622 -29811383 + L1MC1 LINE L1 6211 6332 -1 368 205 86 73 chr20 36856718 36856869 -29811136 + MER58C DNA MER1_type 63 215 0 2105 101 20 0 chr20 36856886 36857182 -29810823 - AluSx SINE Alu -10 302 1 2305 81 3 0 chr20 36857182 36857479 -29810526 - AluSx SINE Alu -9 303 6 1479 69 0 25 chr20 36857610 36857812 -29810193 + MER107 DNA MER1_type 1 197 0 2009 123 3 19 chr20 36858373 36858406 -29809599 - AluSx SINE Alu 0 312 280 180 0 0 0 chr20 36858406 36858426 -29809579 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2009 123 3 19 chr20 36858426 36858709 -29809296 - AluSx SINE Alu -32 280 1 1310 70 16 16 chr20 36858711 36858897 -29809108 - L1PA8 LINE L1 -8 6164 5979 277 279 90 123 chr20 36858922 36859096 -29808909 + L2 LINE L2 2783 2961 -311 1996 119 0 14 chr20 36859096 36859390 -29808615 - AluJo SINE Alu -22 290 1 277 279 90 123 chr20 36859390 36859692 -29808313 + L2 LINE L2 2961 3241 -31 251 163 0 47 chr20 36859993 36860036 -29807969 + AluJb SINE Alu 1 41 -259 1664 162 10 20 chr20 36860092 36860388 -29807617 + AluJb SINE Alu 20 312 0 295 214 100 63 chr20 36860806 36860916 -29807089 - MER5A DNA MER1_type 0 189 63 465 232 148 7 chr20 36861129 36861284 -29806721 + MLT1K LTR MaLR 412 588 0 1667 191 3 3 chr20 36861314 36861607 -29806398 - AluJb SINE Alu -19 293 1 181 233 100 17 chr20 36861622 36861682 -29806323 - MER5A DNA MER1_type -124 65 1 1797 125 66 3 chr20 36862073 36862362 -29805643 - AluSx SINE Alu -5 307 1 381 324 83 37 chr20 36862387 36862603 -29805402 + L2 LINE L2 2553 2778 -536 750 101 0 0 chr20 36862674 36862773 -29805232 + AluSc SINE Alu 1 99 -210 627 280 126 5 chr20 36862777 36862991 -29805014 - MLT1J LTR MaLR -227 284 45 545 223 13 7 chr20 36863011 36863180 -29804825 - L1MB7 LINE L1 -39 6127 5949 219 378 144 11 chr20 36863209 36863397 -29804608 + L2 LINE L2 3033 3245 -27 2495 146 61 5 chr20 36863450 36863874 -29804131 + MER83 LTR ERV1 1 448 0 864 44 106 0 chr20 36863923 36864036 -29803969 + AluYa5 SINE Alu 1 125 -186 1992 47 55 0 chr20 36864036 36864311 -29803694 + AluY SINE Alu 23 311 0 1550 172 28 14 chr20 36864460 36864750 -29803255 + AluJb SINE Alu 8 301 -11 1789 100 0 8 chr20 36864778 36865051 -29802954 - AluSx SINE Alu 0 307 37 688 179 26 8 chr20 36865155 36865272 -29802733 + AluJo SINE Alu 120 238 -74 841 184 0 7 chr20 36865307 36865448 -29802557 - FAM SINE Alu -45 140 1 807 245 61 66 chr20 36865885 36866060 -29801945 - L1MC4 LINE L1 -114 7928 7754 1923 148 0 7 chr20 36866060 36866364 -29801641 - AluSx SINE Alu -10 302 1 807 245 61 66 chr20 36866364 36866629 -29801376 - L1MC4 LINE L1 -288 7754 7490 1873 144 3 3 chr20 36867043 36867334 -29800671 - AluJo SINE Alu -21 291 1 314 286 94 41 chr20 36867355 36867526 -29800479 + L1ME4a LINE L1 5895 6074 -47 331 276 172 0 chr20 36867683 36867817 -29800188 + L2 LINE L2 2925 3081 -232 1709 157 7 3 chr20 36867827 36868159 -29799846 + AluSq SINE Alu 1 333 0 566 213 115 40 chr20 36868324 36868498 -29799507 + MLT1L LTR MaLR 429 615 0 1769 170 0 16 chr20 36868593 36868910 -29799095 - AluJo SINE Alu 0 312 1 364 259 37 0 chr20 36869004 36869112 -29798893 - HAL1 LINE L1 -110 2397 2286 1663 172 26 0 chr20 36869174 36869476 -29798529 - AluSx SINE Alu -2 310 1 2304 71 0 3 chr20 36869605 36869900 -29798105 - AluSc SINE Alu -15 294 1 299 242 31 102 chr20 36870358 36870431 -29797574 + L1ME LINE L1 5640 5702 -419 1411 200 35 7 chr20 36870431 36870721 -29797284 - AluJb SINE Alu -14 298 1 299 242 31 102 chr20 36870721 36870775 -29797230 + L1ME LINE L1 5702 5758 -363 1590 155 15 0 chr20 36870797 36871062 -29796943 - AluJb SINE Alu -43 269 1 1905 138 3 10 chr20 36871094 36871406 -29796599 + AluSx SINE Alu 1 310 -2 1993 105 6 48 chr20 36871418 36871769 -29796236 + AluSp SINE Alu 12 313 0 293 258 0 162 chr20 36871961 36872159 -29795846 - MIR SINE MIR -1 261 96 229 281 156 0 chr20 36872171 36872267 -29795738 + L2 LINE L2 3203 3313 0 548 216 33 33 chr20 36872534 36872687 -29795318 - L1ME LINE L1 -559 5607 5455 1331 165 37 44 chr20 36873039 36873269 -29794736 + AluSx SINE Alu 42 271 -41 2063 102 16 13 chr20 36873269 36873572 -29794433 - AluSp SINE Alu -9 304 1 1331 165 37 44 chr20 36873572 36873614 -29794391 + AluSx SINE Alu 271 312 0 340 281 184 0 chr20 36873912 36874026 -29793979 + L2 LINE L2 3177 3311 -2 452 222 0 22 chr20 36874153 36874243 -29793762 - Tigger3(Golem) DNA MER2_type -1 3028 2941 2103 113 0 7 chr20 36874244 36874544 -29793461 - AluSx SINE Alu -14 298 1 3274 111 24 2 chr20 36874545 36875039 -29792966 - Tigger3b DNA MER2_type -650 581 77 707 188 0 0 chr20 36875039 36875156 -29792849 + FLAM_C SINE Alu 1 117 -26 2261 90 7 0 chr20 36875164 36875465 -29792540 - AluSc SINE Alu -1 308 6 1918 106 0 68 chr20 36875499 36875833 -29792172 + AluSx SINE Alu 1 312 0 424 167 90 0 chr20 36875833 36875911 -29792094 - Tigger3b DNA MER2_type -1146 85 1 355 278 10 10 chr20 36875912 36876009 -29791996 + L3 LINE CR1 1477 1573 -4 243 359 23 0 chr20 36876018 36876146 -29791859 + L2 LINE L2 2877 3007 -265 1093 201 9 5 chr20 36876232 36876456 -29791549 - AluJb SINE Alu -87 225 1 232 269 13 13 chr20 36877082 36877160 -29790845 + L1ME LINE L1 5641 5718 -403 27 22 0 22 chr20 36877160 36877174 -29790831 + AT_rich Low_complexity Low_complexity 1 14 -30 1225 102 15 39 chr20 36877174 36877349 -29790656 - L1MA2 LINE L1 0 6304 6133 1886 133 32 0 chr20 36877349 36877634 -29790371 - AluSq SINE Alu -19 294 1 1225 102 15 39 chr20 36877634 36877663 -29790342 - L1MA2 LINE L1 -171 6133 6105 27 22 0 22 chr20 36877663 36877693 -29790312 + AT_rich Low_complexity Low_complexity 14 44 0 3359 93 14 6 chr20 36877693 36878178 -29789827 - L1MA2 LINE L1 -184 6120 5632 2020 130 0 13 chr20 36878320 36878610 -29789395 + AluSq SINE Alu 1 288 -25 255 93 0 0 chr20 36878610 36878653 -29789352 + (CATA)n Simple_repeat Simple_repeat 2 44 0 2020 130 0 13 chr20 36878653 36878669 -29789336 + AluSq SINE Alu 288 303 -10 23 0 0 29 chr20 36878828 36878843 -29789162 + AT_rich Low_complexity Low_complexity 1 15 -18 2178 108 0 13 chr20 36878843 36879158 -29788847 + AluSx SINE Alu 1 311 -1 23 0 0 29 chr20 36879158 36879176 -29788829 + AT_rich Low_complexity Low_complexity 15 33 0 6920 61 8 170 chr20 36879220 36880624 -29787381 + SVA Other Other 1 1176 -210 1023 269 157 19 chr20 36880966 36881484 -29786521 - L2 LINE L2 0 3313 2703 640 300 99 44 chr20 36881479 36881581 -29786424 - L2 LINE L2 -3 3310 3215 * 1849 155 3 3 chr20 36881581 36881878 -29786127 + AluJo SINE Alu 6 302 -10 640 300 99 44 chr20 36881878 36882270 -29785735 - L2 LINE L2 -98 3215 2796 222 300 0 0 chr20 36882318 36882388 -29785617 + A-rich Low_complexity Low_complexity 1 70 0 186 298 18 0 chr20 36882388 36882445 -29785560 - L2 LINE L2 -600 2714 2657 1137 107 6 0 chr20 36882492 36882651 -29785354 + AluSx SINE Alu 2 161 -151 2458 44 0 0 chr20 36882676 36882974 -29785031 - AluY SINE Alu -13 298 1 387 77 44 121 chr20 36883146 36883237 -29784768 + L1ME1 LINE L1 6081 6164 0 1614 163 33 0 chr20 36883271 36883392 -29784613 + AluJo SINE Alu 1 117 -195 207 0 0 0 chr20 36883392 36883415 -29784590 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1614 163 33 0 chr20 36883415 36883569 -29784436 + AluJo SINE Alu 117 285 -27 225 329 177 0 chr20 36883804 36883962 -29784043 - L2 LINE L2 -36 3236 3051 2236 93 7 0 chr20 36884371 36884671 -29783334 - AluSx SINE Alu -10 302 1 1747 133 30 23 chr20 36884821 36885121 -29782884 + AluJb SINE Alu 1 302 -10 200 213 0 0 chr20 36885440 36885487 -29782518 + A-rich Low_complexity Low_complexity 1 47 0 2135 110 3 13 chr20 36885643 36885951 -29782054 - AluSx SINE Alu -7 305 1 1772 142 31 0 chr20 36886022 36886192 -29781813 - AluSx SINE Alu -15 297 113 189 0 0 0 chr20 36886192 36886213 -29781792 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1772 142 31 0 chr20 36886213 36886330 -29781675 - AluSx SINE Alu -199 113 1 916 193 0 0 chr20 36886385 36886546 -29781459 + FRAM SINE Alu 4 164 -2 308 258 26 123 chr20 36886583 36886738 -29781267 - MIR SINE MIR -109 153 14 655 255 201 20 chr20 36887292 36887590 -29780415 + L2 LINE L2 2928 3279 -34 413 222 33 11 chr20 36887728 36887818 -29780187 + MARNA DNA Mariner 267 358 -228 355 255 48 35 chr20 36888314 36888459 -29779546 + MER103 DNA DNA 20 166 0 2058 95 0 14 chr20 36888656 36888939 -29779066 + AluSx SINE Alu 1 279 -33 25 51 0 0 chr20 36888956 36888995 -29779010 + AT_rich Low_complexity Low_complexity 1 39 0 636 239 61 6 chr20 36889318 36889481 -29778524 + MIR SINE MIR 31 202 -60 488 224 67 22 chr20 36889705 36889839 -29778166 + MIR SINE MIR 13 152 -110 863 129 0 16 chr20 36889862 36890099 -29777906 + AluSx SINE Alu 2 300 -12 249 212 45 15 chr20 36890384 36890450 -29777555 + GA-rich Low_complexity Low_complexity 5 72 0 2358 80 0 0 chr20 36890678 36890977 -29777028 + AluSq SINE Alu 1 299 -14 228 197 28 70 chr20 36892051 36892122 -29775883 + LTR67 LTR ERVL 490 557 0 2364 93 0 0 chr20 36892163 36892475 -29775530 - AluSx SINE Alu 0 312 1 230 311 0 0 chr20 36892513 36892574 -29775431 - MIR SINE MIR -114 148 88 547 217 0 27 chr20 36892975 36893159 -29774846 + T-rich Low_complexity Low_complexity 1 179 0 * 702 216 8 8 chr20 36893119 36893386 -29774619 + CT-rich Low_complexity Low_complexity 1 267 0 964 175 6 6 chr20 36893387 36893553 -29774452 - FAM SINE Alu -9 166 1 23 33 0 0 chr20 36893582 36893612 -29774393 + AT_rich Low_complexity Low_complexity 1 30 0 3327 202 32 32 chr20 36893619 36894401 -29773604 - L1ME1 LINE L1 -14 6152 5371 1812 146 0 20 chr20 36894420 36894721 -29773284 + AluSx SINE Alu 16 310 -2 1199 198 0 4 chr20 36895352 36895590 -29772415 - AluJb SINE Alu 0 312 76 1946 117 20 7 chr20 36895593 36895893 -29772112 - AluSx SINE Alu 0 312 9 227 246 123 0 chr20 36896259 36896316 -29771689 - MIR SINE MIR -120 142 79 266 276 143 0 chr20 36896438 36896536 -29771469 + L2 LINE L2 3202 3313 0 557 329 38 14 chr20 36896591 36896804 -29771201 - MIR SINE MIR 0 262 45 2107 96 0 23 chr20 36897530 36897831 -29770174 + AluSx SINE Alu 1 294 -18 1631 128 80 31 chr20 36897967 36898286 -29769719 - AluJb SINE Alu 0 312 1 1966 98 91 0 chr20 36898291 36898577 -29769428 - AluSx SINE Alu 0 312 1 897 159 0 0 chr20 36898635 36898780 -29769225 - AluJb SINE Alu -16 296 152 698 130 0 0 chr20 36898780 36898880 -29769125 + AluSg/x SINE Alu 198 297 -13 2148 100 0 7 chr20 36898939 36899238 -29768767 - AluSg SINE Alu -13 297 1 325 218 168 20 chr20 36899550 36899651 -29768354 - L1ME3A LINE L1 -53 6117 6002 191 88 29 0 chr20 36899669 36899703 -29768302 + (TG)n Simple_repeat Simple_repeat 2 36 0 1304 236 28 20 chr20 36899770 36900126 -29767879 - L1ME1 LINE L1 -18 6148 5790 260 294 0 0 chr20 36900205 36900273 -29767732 + L2 LINE L2 3246 3313 0 2130 109 3 16 chr20 36900293 36900605 -29767400 + AluSx SINE Alu 1 308 -4 227 167 37 0 chr20 36900708 36900762 -29767243 + (TA)n Simple_repeat Simple_repeat 1 56 0 24 85 0 0 chr20 36900783 36900842 -29767163 + AT_rich Low_complexity Low_complexity 1 59 0 233 300 173 0 chr20 36901103 36901213 -29766792 + MIR3 SINE MIR 55 183 -25 629 262 148 16 chr20 36901236 36901419 -29766586 + MIR SINE MIR 5 211 -51 2150 109 0 7 chr20 36901472 36901775 -29766230 - AluSx SINE Alu -11 301 1 297 288 12 0 chr20 36902151 36902231 -29765774 + L2 LINE L2 3219 3299 -14 183 42 0 0 chr20 36902232 36902256 -29765749 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 572 301 99 46 chr20 36902261 36902606 -29765399 + L2 LINE L2 2900 3262 -51 508 261 140 26 chr20 36903161 36903425 -29764580 + L2 LINE L2 3020 3313 0 2082 108 3 3 chr20 36903459 36903754 -29764251 + AluSx SINE Alu 2 296 -16 755 211 45 72 chr20 36903801 36904024 -29763981 + L2 LINE L2 3095 3311 -2 1615 163 13 27 chr20 36904208 36904342 -29763663 + AluJo SINE Alu 1 135 -177 2212 86 0 25 chr20 36904342 36904657 -29763348 + AluY SINE Alu 1 307 -4 1615 163 13 27 chr20 36904657 36904823 -29763182 + AluJo SINE Alu 135 297 -15 2068 128 0 6 chr20 36904854 36905166 -29762839 - AluSx SINE Alu -2 310 1 744 197 31 105 chr20 36905274 36905336 -29762669 - L1ME1 LINE L1 -528 5638 5573 1354 196 35 7 chr20 36905336 36905621 -29762384 + AluJo SINE Alu 1 293 -19 2097 105 0 10 chr20 36905628 36905923 -29762082 + AluSx SINE Alu 10 301 -11 744 197 31 105 chr20 36905923 36906080 -29761925 - L1ME1 LINE L1 -599 5567 5428 853 160 29 34 chr20 36906088 36906263 -29761742 - AluJo SINE Alu -138 174 1 1339 183 149 0 chr20 36906263 36906585 -29761420 + MER63 DNA MER1_type 692 1061 0 226 178 0 0 chr20 36906585 36906630 -29761375 - L1ME1 LINE L1 -859 5307 5263 1117 180 0 38 chr20 36906634 36906845 -29761160 + MER3 DNA MER1_type 1 203 -6 309 152 22 0 chr20 36906942 36906988 -29761017 + MIR SINE MIR 14 60 -202 1619 134 7 28 chr20 36907015 36907306 -29760699 + AluJo SINE Alu 21 305 -7 202 296 0 56 chr20 36907306 36907377 -29760628 + MIR SINE MIR 194 260 -2 2165 92 7 0 chr20 36907537 36907841 -29760164 - AluSx SINE Alu -6 306 1 299 244 50 34 chr20 36908647 36908766 -29759239 + MIR SINE MIR 24 144 -118 583 268 53 57 chr20 36908799 36909027 -29758978 + MIR SINE MIR 22 248 -14 338 314 16 24 chr20 36909070 36909194 -29758811 - MIR SINE MIR -71 191 69 583 241 146 41 chr20 36909219 36909439 -29758566 + MIR SINE MIR 2 244 -18 1208 263 83 49 chr20 36909622 36909922 -29758083 + L2 LINE L2 2463 2751 -562 2435 54 0 0 chr20 36909922 36910217 -29757788 + AluSc SINE Alu 1 295 -14 1208 263 83 49 chr20 36910217 36910394 -29757611 + L2 LINE L2 2751 2920 -393 1782 128 47 3 chr20 36910394 36910692 -29757313 - AluSx SINE Alu -1 311 1 1208 263 83 49 chr20 36910692 36911023 -29756982 + L2 LINE L2 2920 3305 -8 2281 101 0 0 chr20 36911059 36911367 -29756638 - AluSx SINE Alu -4 308 1 1740 148 3 17 chr20 36911370 36911668 -29756337 - AluJb SINE Alu -18 294 1 578 244 47 0 chr20 36911921 36912048 -29755957 - L2 LINE L2 -1 3312 3180 769 231 119 45 chr20 36912139 36912193 -29755812 - MIR SINE MIR 0 262 213 1872 101 4 11 chr20 36912193 36912461 -29755544 - AluSq SINE Alu -17 296 31 769 231 119 45 chr20 36912461 36912649 -29755356 - MIR SINE MIR -49 213 2 199 260 265 22 chr20 36912662 36912843 -29755162 - L2 LINE L2 -221 3051 2827 266 259 62 18 chr20 36912964 36913076 -29754929 - L3 LINE CR1 -305 1272 1156 1953 127 0 3 chr20 36913484 36913775 -29754230 + AluSg SINE Alu 1 290 -20 1836 120 32 7 chr20 36914118 36914402 -29753603 - AluJb SINE Alu -13 299 9 1917 202 63 87 chr20 36914504 36914595 -29753410 - MLT1E2 LTR MaLR -4 622 530 1102 159 12 0 chr20 36914595 36914765 -29753240 - FAM SINE Alu -3 172 1 1917 202 63 87 chr20 36914765 36915320 -29752685 - MLT1E2 LTR MaLR -96 530 3 780 142 22 30 chr20 36915451 36915585 -29752420 - AluJo SINE Alu -178 134 2 1077 242 33 35 chr20 36915586 36916011 -29751994 - L1MC5 LINE L1 -303 7658 7235 440 202 11 9 chr20 36916061 36916194 -29751811 - L1MEc LINE L1 -3905 2345 2217 2652 10 0 0 chr20 36916194 36916494 -29751511 + AluYa5 SINE Alu 1 300 -11 460 246 154 16 chr20 36916499 36916583 -29751422 - L1MEc LINE L1 -4127 2269 2198 1987 120 0 16 chr20 36916583 36916916 -29751089 - AluSx SINE Alu 0 312 1 460 246 154 16 chr20 36916916 36917136 -29750869 - L1MEc LINE L1 -4198 2198 1923 1875 114 52 3 chr20 36917136 36917426 -29750579 - AluSc SINE Alu -5 304 1 317 231 106 19 chr20 36917444 36917548 -29750457 - L1MEc LINE L1 -6214 182 70 1639 159 10 26 chr20 36917594 36917896 -29750109 - AluJo SINE Alu -15 297 1 1720 156 7 3 chr20 36917909 36918198 -29749807 - AluSx SINE Alu -12 300 11 235 207 17 0 chr20 36918221 36918279 -29749726 - L1MC4a LINE L1 -869 6939 6881 429 20 0 0 chr20 36918285 36918335 -29749670 + (TG)n Simple_repeat Simple_repeat 1 50 0 512 234 78 0 chr20 36918336 36918464 -29749541 + MER58B DNA MER1_type 200 337 -4 335 367 27 7 chr20 36919340 36919490 -29748515 + MIR SINE MIR 17 169 -93 193 299 75 15 chr20 36919608 36919675 -29748330 + L2 LINE L2 3188 3258 -14 1924 124 7 7 chr20 36920168 36920458 -29747547 + AluSx SINE Alu 1 290 -22 1309 74 0 11 chr20 36920458 36920633 -29747372 + AluY SINE Alu 1 173 -138 1581 143 10 75 chr20 36920774 36921082 -29746923 + AluJo SINE Alu 2 289 -23 440 217 22 0 chr20 36921093 36921185 -29746820 + MIR SINE MIR 147 240 -22 343 271 0 0 chr20 36921257 36921327 -29746678 - L2 LINE L2 -2 3270 3201 433 344 28 42 chr20 36921507 36921795 -29746210 - L2 LINE L2 0 3313 3030 1784 159 3 7 chr20 36921818 36922120 -29745885 + AluJo SINE Alu 1 301 -11 500 198 12 0 chr20 36922169 36922255 -29745750 + L2 LINE L2 3203 3289 -24 272 283 166 5 chr20 36922260 36922593 -29745412 - L2 LINE L2 -235 3037 2655 439 307 260 18 chr20 36922606 36923229 -29744776 - L2 LINE L2 -830 2484 1711 234 0 0 0 chr20 36923229 36923255 -29744750 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2132 83 0 0 chr20 36923259 36923535 -29744470 - AluSq SINE Alu -37 276 1 243 243 101 40 chr20 36923581 36923729 -29744276 - L2 LINE L2 -273 2999 2843 839 277 9 22 chr20 36924397 36924621 -29743384 + MIR SINE MIR 23 243 -19 1320 168 16 87 chr20 36925036 36925209 -29742796 - AluSx SINE Alu -4 298 157 2260 67 0 17 chr20 36925209 36925506 -29742499 - AluY SINE Alu -19 292 1 1320 168 16 87 chr20 36925506 36925653 -29742352 - AluSx SINE Alu -145 157 1 575 312 141 37 chr20 36926022 36926571 -29741434 - L2 LINE L2 -339 2975 2352 1652 149 44 0 chr20 36926571 36926866 -29741139 - AluJo SINE Alu -3 309 2 575 312 141 37 chr20 36926866 36926941 -29741064 - L2 LINE L2 -962 2352 2286 386 288 65 13 chr20 36926952 36927105 -29740900 + MIR SINE MIR 67 227 -35 331 242 15 129 chr20 36928263 36928395 -29739610 - L2 LINE L2 0 3272 3156 1100 149 14 54 chr20 36928811 36928971 -29739034 - AluJo SINE Alu -16 296 146 2085 100 21 0 chr20 36928971 36929262 -29738743 - AluSx SINE Alu -15 297 1 1100 149 14 54 chr20 36929262 36929323 -29738682 - AluJo SINE Alu -166 146 84 540 288 83 5 chr20 36929940 36930145 -29737860 + MIR SINE MIR 30 250 -12 892 168 18 36 chr20 36930255 36930422 -29737583 - FRAM SINE Alu -12 164 1 379 308 110 7 chr20 36930541 36930687 -29737318 + MIR SINE MIR 20 180 -82 1882 174 25 6 chr20 36931675 36931899 -29736106 + L1MB5 LINE L1 5799 6034 -140 1868 164 3 0 chr20 36931899 36932198 -29735807 - AluJb SINE Alu -12 300 1 1882 174 25 6 chr20 36932198 36932334 -29735671 + L1MB5 LINE L1 6034 6166 -8 1656 136 100 4 chr20 36932335 36932615 -29735390 - AluJb SINE Alu -5 307 1 589 315 73 5 chr20 36935394 36935613 -29732392 + MIR SINE MIR 28 261 -1 2021 119 0 7 chr20 36935691 36935984 -29732021 - AluSx SINE Alu -21 291 1 1686 153 78 0 chr20 36936649 36936931 -29731074 - AluSg SINE Alu -6 304 1 2232 98 0 0 chr20 36936963 36937260 -29730745 + AluSc SINE Alu 1 297 -12 518 130 0 0 chr20 36937373 36937465 -29730540 - AluJ/FRAM SINE Alu -2 310 219 611 286 104 9 chr20 36937999 36938230 -29729775 + MIR SINE MIR 8 260 -2 830 144 0 34 chr20 36938286 36938432 -29729573 - AluJo SINE Alu -171 141 1 1479 160 26 64 chr20 36938443 36938756 -29729249 - AluJo SINE Alu -11 301 1 472 155 99 68 chr20 36939392 36939502 -29728503 - L1ME4a LINE L1 -1 6120 6002 2209 99 0 3 chr20 36939502 36939805 -29728200 - AluSq SINE Alu -11 302 1 472 155 99 68 chr20 36939805 36939855 -29728150 - L1ME4a LINE L1 -119 6002 5955 766 162 8 0 chr20 36939881 36939998 -29728007 + AluJo/FLAM SINE Alu 2 119 -193 2166 98 0 0 chr20 36940000 36940308 -29727697 - AluSx SINE Alu 0 308 1 2072 104 0 13 chr20 36940329 36940636 -29727369 + AluSx SINE Alu 1 303 -9 1588 113 90 23 chr20 36940705 36940971 -29727034 - AluSq SINE Alu -12 301 18 470 141 14 0 chr20 36940971 36941042 -29726963 - AluS SINE Alu -240 73 2 935 145 0 0 chr20 36941125 36941270 -29726735 + AluJb SINE Alu 156 300 -12 688 200 24 0 chr20 36941281 36941406 -29726599 + FLAM_A SINE Alu 1 128 -5 1858 119 21 11 chr20 36941459 36941745 -29726260 - AluSq SINE Alu -15 298 10 25 0 0 0 chr20 36941965 36941990 -29726015 + AT_rich Low_complexity Low_complexity 1 25 0 342 338 29 7 chr20 36941990 36942129 -29725876 - L1ME4a LINE L1 -14 6107 5966 1232 191 139 8 chr20 36942314 36942581 -29725424 + AluJo SINE Alu 1 302 0 2090 174 118 79 chr20 36943528 36944183 -29723822 - L1MC4a LINE L1 -272 7536 6857 183 80 0 0 chr20 36944497 36944522 -29723483 + (TTTTC)n Simple_repeat Simple_repeat 4 28 0 459 235 136 63 chr20 36944701 36945030 -29722975 - L1ME4a LINE L1 -747 5399 5095 2248 101 0 0 chr20 36945030 36945336 -29722669 + AluSx SINE Alu 1 306 -6 459 235 136 63 chr20 36945336 36945423 -29722582 - L1ME4a LINE L1 -1051 5095 5051 1987 151 0 0 chr20 36945423 36945735 -29722270 - AluSx SINE Alu 0 312 1 459 235 136 63 chr20 36945735 36945815 -29722190 - L1ME4a LINE L1 -1095 5051 4978 1960 148 0 3 chr20 36945892 36946197 -29721808 - AluJb SINE Alu 0 312 9 2309 76 0 0 chr20 36946246 36946564 -29721441 - AluSc SINE Alu 0 318 1 2113 92 6 32 chr20 36946696 36947011 -29720994 - AluSx SINE Alu -5 307 1 373 149 0 0 chr20 36947037 36947104 -29720901 - L1MB7 LINE L1 -7 6177 6111 1761 136 11 14 chr20 36947120 36947399 -29720606 + AluJo SINE Alu 18 295 -17 913 106 0 0 chr20 36947401 36947524 -29720481 + AluSq/x SINE Alu 3 125 -188 4143 181 36 43 chr20 36947541 36948932 -29719073 - L1MB7 LINE L1 -58 6126 4750 285 51 0 0 chr20 36949146 36949185 -29718820 + (TG)n Simple_repeat Simple_repeat 1 39 0 2121 118 0 7 chr20 36950166 36950471 -29717534 - AluSx SINE Alu -9 303 1 251 262 0 0 chr20 36950478 36950562 -29717443 - L1MC/D LINE L1 -1988 5820 5737 1565 207 126 3 chr20 36951902 36952259 -29715746 - MLT1I LTR MaLR -6 403 3 680 295 124 4 chr20 36952261 36952495 -29715510 + MIR SINE MIR 1 262 0 225 154 0 0 chr20 36952583 36952622 -29715383 + T-rich Low_complexity Low_complexity 1 39 0 639 256 6 30 chr20 36953440 36953608 -29714397 - MER117 DNA MER1_type -2 195 32 1849 114 8 0 chr20 36955066 36955328 -29712677 - AluSx SINE Alu -31 281 18 802 124 9 0 chr20 36955378 36955491 -29712514 + AluJb SINE Alu 2 115 -197 343 320 97 24 chr20 36956811 36957060 -29710945 - MIR SINE MIR -2 260 3 246 320 78 16 chr20 36957815 36957943 -29710062 + L2 LINE L2 3136 3271 -1 190 315 128 20 chr20 36959125 36959274 -29708731 - MIR SINE MIR -61 201 37 352 260 55 40 chr20 36960084 36960294 -29707711 - MIR3 SINE MIR -55 153 3 1385 179 67 14 chr20 36960421 36960706 -29707299 + AluJo SINE Alu 1 300 -12 398 263 45 0 chr20 36961758 36961891 -29706114 + L1MC4a LINE L1 5784 5922 -1886 1511 140 65 51 chr20 36961906 36962199 -29705806 + AluJo SINE Alu 1 297 -15 1806 156 10 7 chr20 36963645 36963953 -29704052 - AluJo SINE Alu -3 309 1 243 229 148 83 chr20 36964312 36964511 -29703494 - MIR SINE MIR -52 210 3 2090 116 3 7 chr20 36964613 36964923 -29703082 - AluSx SINE Alu -3 309 1 1595 170 32 0 chr20 36965083 36965360 -29702645 - AluJo SINE Alu -26 286 1 927 79 8 16 chr20 36966893 36967020 -29700985 + AluJo SINE Alu 11 136 -176 1220 173 27 9 chr20 36968106 36968326 -29699679 - MER58A DNA MER1_type 0 224 1 315 0 0 0 chr20 36968547 36968582 -29699423 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 658 242 32 16 chr20 36968587 36968773 -29699232 - L1ME1 LINE L1 -4 6162 5974 807 139 0 0 chr20 36968907 36969022 -29698983 - FLAM_C SINE Alu -18 125 11 1928 97 40 27 chr20 36971027 36971327 -29696678 + AluSx SINE Alu 1 304 -8 262 151 38 0 chr20 36971335 36971388 -29696617 - MSTC LTR MaLR -373 55 1 519 264 103 23 chr20 36971490 36971664 -29696341 + MIR SINE MIR 3 190 -72 320 94 0 38 chr20 36971725 36971778 -29696227 + MADE1 DNA Mariner 30 80 0 633 264 48 39 chr20 36972080 36972288 -29695717 + Charlie8 DNA MER1_type 58 267 -2150 370 251 186 64 chr20 36972836 36973163 -29694842 - L2 LINE L2 -33 3239 2873 704 148 74 0 chr20 36973274 36973382 -29694623 - FLAM_A SINE Alu -17 116 1 1870 153 16 0 chr20 36973456 36973763 -29694242 - AluJb SINE Alu 0 312 1 461 236 190 11 chr20 36973973 36974147 -29693858 + MIR SINE MIR 31 235 -27 204 235 78 0 chr20 36974113 36974164 -29693841 + L2 LINE L2 3206 3260 -12 * 2227 116 0 3 chr20 36975312 36975613 -29692392 - AluSx SINE Alu -12 300 1 682 194 14 0 chr20 36975678 36975817 -29692188 - L1ME3 LINE L1 -1 6161 6021 2113 206 96 75 chr20 36975937 36975992 -29692013 + L2 LINE L2 1744 1796 -1518 1219 136 43 116 chr20 36975992 36976226 -29691779 - MER33 DNA MER1_type -2261 324 121 1911 152 3 23 chr20 36976226 36976535 -29691470 - AluJo SINE Alu -5 307 5 1219 136 43 116 chr20 36976535 36976645 -29691360 - MER33 DNA MER1_type -2464 121 5 2113 206 96 75 chr20 36976645 36976945 -29691060 + L2 LINE L2 1796 2088 -1226 2392 89 7 7 chr20 36976945 36977247 -29690758 - AluSx SINE Alu -10 302 1 2113 206 96 75 chr20 36977247 36977689 -29690316 + L2 LINE L2 2088 2559 -755 354 218 69 0 chr20 36977689 36977790 -29690215 + L2 LINE L2 2689 2796 -518 1314 154 189 84 chr20 36977790 36977983 -29690022 + LTR54B LTR ERV1 1 172 -326 2469 94 0 0 chr20 36977983 36978290 -29689715 + AluSx SINE Alu 1 307 -5 1314 154 189 84 chr20 36978290 36978524 -29689481 + LTR54B LTR ERV1 172 473 -25 2184 104 0 10 chr20 36978524 36978839 -29689166 + AluSx SINE Alu 1 312 0 1167 257 104 38 chr20 36978893 36979364 -29688641 + L2 LINE L2 2807 3308 -5 2363 101 3 0 chr20 36979364 36979662 -29688343 + AluSp SINE Alu 1 299 -14 574 288 88 13 chr20 36979747 36979973 -29688032 + MIR SINE MIR 14 256 -6 1469 132 0 5 chr20 36981458 36981671 -29686334 + AluSq SINE Alu 1 212 -101 389 107 0 0 chr20 36981671 36981727 -29686278 + AluSq/x SINE Alu 78 133 -169 2151 110 24 0 chr20 36981730 36982021 -29685984 + AluSq SINE Alu 1 298 -15 186 292 0 0 chr20 36982381 36982429 -29685576 - MER5A DNA MER1_type -22 167 120 204 40 0 0 chr20 36982573 36982598 -29685407 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 681 170 0 0 chr20 36982598 36982710 -29685295 - FLAM_C SINE Alu -19 114 3 2219 127 7 0 chr20 36982722 36983022 -29684983 - AluSx SINE Alu -10 302 1 2398 165 92 103 chr20 36983478 36984265 -29683740 + L1MC4 LINE L1 7265 8042 0 226 259 281 0 chr20 36984270 36984351 -29683654 + MIR SINE MIR 20 77 -185 2581 58 0 7 chr20 36984351 36984660 -29683345 + AluY SINE Alu 1 307 -4 226 259 281 0 chr20 36984660 36984713 -29683292 + MIR SINE MIR 77 192 -70 1841 184 13 0 chr20 36984721 36985020 -29682985 + AluJo SINE Alu 1 303 -9 184 294 29 15 chr20 36985028 36985096 -29682909 - MIR SINE MIR 0 262 194 227 229 244 61 chr20 36986011 36986142 -29681863 + MIR SINE MIR 20 174 -88 2171 122 3 0 chr20 36986209 36986505 -29681500 + AluSx SINE Alu 4 300 -12 515 267 24 18 chr20 36986634 36986799 -29681206 + MIR SINE MIR 31 196 -66 260 230 65 115 chr20 36987561 36987712 -29680293 - L3 LINE CR1 -31 1546 1408 1959 176 0 0 chr20 36987712 36988013 -29679992 - AluJo SINE Alu -11 301 1 260 230 65 115 chr20 36988013 36988078 -29679927 - L3 LINE CR1 -169 1408 1341 249 304 43 26 chr20 36988698 36988813 -29679192 - MIR SINE MIR -63 145 29 1192 153 0 93 chr20 36989338 36989574 -29678431 + AluJb SINE Alu 85 298 -14 1806 183 0 19 chr20 36991063 36991375 -29676630 + AluSx SINE Alu 1 306 -6 251 279 38 82 chr20 36991843 36991947 -29676058 + MIR3 SINE MIR 9 105 -103 2555 71 0 0 chr20 36991947 36992243 -29675762 + AluSg SINE Alu 1 296 -14 251 279 38 82 chr20 36992243 36992296 -29675709 + MIR3 SINE MIR 105 159 -49 2056 142 3 0 chr20 36992314 36992602 -29675403 - AluSx SINE Alu -23 289 1 2072 141 0 3 chr20 36992948 36993252 -29674753 + AluSx SINE Alu 1 303 -9 2377 98 0 3 chr20 36993254 36993582 -29674423 + AluY SINE Alu 5 331 0 1187 171 42 5 chr20 36993610 36993827 -29674178 - AluJo SINE Alu 0 312 88 22 0 0 0 chr20 36993835 36993857 -29674148 + AT_rich Low_complexity Low_complexity 1 22 0 257 239 104 23 chr20 36994099 36994229 -29673776 + MIR SINE MIR 103 245 -17 282 252 63 40 chr20 36994237 36994363 -29673642 - MIR SINE MIR -73 135 35 967 131 0 21 chr20 36994367 36994512 -29673493 + FRAM SINE Alu 26 167 -9 27 0 0 0 chr20 36994571 36994598 -29673407 + AT_rich Low_complexity Low_complexity 1 27 0 2341 101 0 7 chr20 36994613 36994921 -29673084 + AluSx SINE Alu 1 306 -6 2075 203 53 73 chr20 36994922 36995386 -29672619 - L1ME1 LINE L1 -18 6148 5699 1683 161 17 37 chr20 36995386 36995684 -29672321 - AluJo SINE Alu -17 295 4 2075 203 53 73 chr20 36995684 36995860 -29672145 - L1ME1 LINE L1 -467 5699 5521 465 254 30 43 chr20 36996244 36996421 -29671584 + MIR SINE MIR 15 188 -61 908 135 14 7 chr20 36996430 36996571 -29671434 + FLAM_C SINE Alu 1 142 -1 375 206 10 69 chr20 36997407 36997509 -29670496 + MIR SINE MIR 77 172 -90 2403 93 3 0 chr20 36997688 36997990 -29670015 - AluSp SINE Alu -9 304 2 2334 102 7 0 chr20 36997995 36998289 -29669716 - AluSx SINE Alu -16 296 1 530 197 0 0 chr20 36998629 36998733 -29669272 + MER5A DNA MER1_type 6 109 -80 2129 148 0 0 chr20 36999135 36999433 -29668572 + AluSx SINE Alu 1 298 -14 363 367 24 6 chr20 37000142 37000311 -29667694 - MIR SINE MIR -59 203 32 215 286 68 116 chr20 37000838 37001072 -29666933 - L2 LINE L2 -12 3260 3016 2085 104 7 30 chr20 37001072 37001369 -29666636 - AluSx SINE Alu -22 290 1 1857 169 3 0 chr20 37001371 37001661 -29666344 - AluJb SINE Alu -21 291 1 215 286 68 116 chr20 37001661 37001717 -29666288 - L2 LINE L2 -257 3015 2981 267 318 40 16 chr20 37001781 37001907 -29666098 - MER5A DNA MER1_type -54 135 7 2534 90 3 0 chr20 37002499 37002811 -29665194 - AluSp SINE Alu 0 313 1 580 168 28 0 chr20 37002897 37003004 -29665001 + FLAM_C SINE Alu 2 111 -32 336 102 0 0 chr20 37003031 37003080 -29664925 + (GGGGA)n Simple_repeat Simple_repeat 5 53 0 479 262 24 25 chr20 37003132 37003282 -29664723 - MIR SINE MIR -49 159 11 2210 117 7 0 chr20 37003384 37003684 -29664321 + AluSx SINE Alu 1 302 -10 567 152 6 70 chr20 37003736 37003894 -29664111 - L1MC5 LINE L1 -168 7793 7646 362 295 108 49 chr20 37004422 37004449 -29663556 + MIR3 SINE MIR 32 56 -171 1577 126 28 126 chr20 37004449 37004579 -29663426 + AluSx SINE Alu 1 142 -170 2355 85 0 3 chr20 37004579 37004872 -29663133 + AluSx SINE Alu 10 301 -11 1577 126 28 126 chr20 37004872 37005066 -29662939 + AluSx SINE Alu 142 293 -19 362 295 108 49 chr20 37005066 37005232 -29662773 + MIR3 SINE MIR 56 224 -3 2373 95 3 3 chr20 37005304 37005610 -29662395 + AluSx SINE Alu 1 306 -6 331 301 127 12 chr20 37006209 37006382 -29661623 + L2 LINE L2 2866 3058 -214 317 290 0 0 chr20 37006534 37006603 -29661402 - L1MD3 LINE L1 0 7995 7927 1840 143 14 17 chr20 37006611 37006905 -29661100 + AluJo SINE Alu 1 293 -19 196 138 35 0 chr20 37006913 37006939 -29661066 + (TTAAA)n Simple_repeat Simple_repeat 3 27 -35 1602 173 6 77 chr20 37006939 37007124 -29660881 - AluJb SINE Alu -11 301 147 2485 68 0 0 chr20 37007124 37007417 -29660588 - AluY SINE Alu -17 294 2 1602 173 6 77 chr20 37007417 37007555 -29660450 - AluJb SINE Alu -165 147 1 196 138 35 0 chr20 37007555 37007586 -29660419 + (TTAAA)n Simple_repeat Simple_repeat 27 62 0 251 145 18 253 chr20 37007599 37007628 -29660377 - L1MC4 LINE L1 -32 8010 7976 2096 137 0 7 chr20 37007628 37007935 -29660070 + AluJb SINE Alu 1 305 -7 251 145 18 253 chr20 37007935 37008126 -29659879 - L1MC4 LINE L1 -66 7976 7842 347 306 65 0 chr20 37008178 37008302 -29659703 + L2 LINE L2 3134 3265 -7 2324 117 0 0 chr20 37008546 37008853 -29659152 - AluSq SINE Alu -6 307 1 712 216 78 6 chr20 37009219 37009386 -29658619 + MER5A DNA MER1_type 1 179 -10 2084 122 23 0 chr20 37009870 37010173 -29657832 - AluSq SINE Alu -1 312 3 398 262 79 61 chr20 37010419 37010546 -29657459 - L1MC4a LINE L1 -1860 5948 5814 1896 132 46 26 chr20 37010546 37010850 -29657155 - AluSx SINE Alu -2 310 1 398 262 79 61 chr20 37010850 37010951 -29657054 - L1MC4a LINE L1 -1994 5814 5716 192 328 15 0 chr20 37010956 37011023 -29656982 - MIR SINE MIR -62 146 79 476 255 35 76 chr20 37011222 37011367 -29656638 + L2 LINE L2 3134 3272 0 331 369 134 0 chr20 37011386 37011573 -29656432 + MIR SINE MIR 14 225 -37 208 170 43 0 chr20 37011664 37011711 -29656294 - L2 LINE L2 -229 3043 2995 216 338 38 68 chr20 37012179 37012312 -29655693 + L2 LINE L2 3026 3154 -118 215 244 0 0 chr20 37012339 37012380 -29655625 + L2 LINE L2 3268 3308 -5 2284 121 3 0 chr20 37013385 37013691 -29654314 - AluSg SINE Alu -3 307 1 293 73 0 0 chr20 37013768 37013809 -29654196 + MADE1 DNA Mariner 1 41 -39 269 261 14 0 chr20 37013939 37014008 -29653997 - MLT1G LTR MaLR -305 285 216 238 222 0 0 chr20 37014034 37014088 -29653917 - MLT1F1 LTR MaLR -403 192 139 1971 165 0 13 chr20 37014185 37014536 -29653469 + AluJb SINE Alu 1 347 0 186 43 0 0 chr20 37014531 37014554 -29653451 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 188 392 8 17 chr20 37014555 37014675 -29653330 - L2 LINE L2 -237 3035 2917 374 279 188 7 chr20 37014879 37015033 -29652972 + MIR SINE MIR 81 262 0 2207 163 40 71 chr20 37015370 37015669 -29652336 - MLT1C LTR MaLR 0 467 187 936 168 0 0 chr20 37015669 37015824 -29652181 - FRAM SINE Alu -8 158 4 2207 163 40 71 chr20 37015824 37016004 -29652001 - MLT1C LTR MaLR -280 187 3 2017 153 0 10 chr20 37016201 37016496 -29651509 - AluSx SINE Alu -12 300 9 292 336 86 0 chr20 37016676 37016792 -29651213 + L2 LINE L2 3147 3272 0 2213 223 50 0 chr20 37016962 37017478 -29650527 - MLT1F LTR MaLR 0 542 1 560 225 39 8 chr20 37017597 37017726 -29650279 + L2 LINE L2 3136 3268 -4 2642 58 0 3 chr20 37018057 37018366 -29649639 - AluSx SINE Alu -4 308 1 282 195 232 49 chr20 37018968 37019132 -29648873 + MIR SINE MIR 21 214 -48 2284 104 6 22 chr20 37019415 37019732 -29648273 - AluSx SINE Alu 0 312 1 585 202 0 8 chr20 37019764 37019883 -29648122 - FLAM_C SINE Alu -15 118 1 4277 146 142 88 chr20 37020154 37020579 -29647426 - L1MC3 LINE L1 -8 7777 7377 2349 135 3 3 chr20 37020579 37020943 -29647062 + THE1B LTR MaLR 1 364 0 4277 146 142 88 chr20 37020943 37021109 -29646896 - L1MC3 LINE L1 -408 7377 7222 241 257 27 0 chr20 37021109 37021183 -29646822 - MLT1F1 LTR MaLR -456 111 36 4277 146 142 88 chr20 37021183 37021280 -29646725 - L1MC3 LINE L1 -563 7222 7132 2065 108 7 46 chr20 37021280 37021587 -29646418 - AluSx SINE Alu -17 295 1 4277 146 142 88 chr20 37021587 37021725 -29646280 - L1MC3 LINE L1 -653 7132 7003 195 42 0 0 chr20 37021725 37021749 -29646256 + (TTTTG)n Simple_repeat Simple_repeat 4 27 0 4277 146 142 88 chr20 37021749 37022055 -29645950 - L1MC3 LINE L1 -782 7003 6503 4052 79 6 2 chr20 37022056 37022577 -29645428 - MER1A DNA MER1_type -2 527 5 1870 145 36 6 chr20 37022581 37022918 -29645087 - L1MC3 LINE L1 -1274 6511 6165 695 175 0 0 chr20 37022939 37023053 -29644952 - FLAM_C SINE Alu -22 121 8 525 176 16 24 chr20 37023060 37023185 -29644820 - L1MC3 LINE L1 -1619 6166 6043 1077 235 165 9 chr20 37023227 37023857 -29644148 + L2 LINE L2 2503 3313 0 649 229 17 72 chr20 37024317 37024553 -29643452 + MER112 DNA MER1_type 33 255 -5 499 277 99 20 chr20 37024553 37024755 -29643250 + MIR SINE MIR 10 227 -35 885 168 103 0 chr20 37025032 37025217 -29642788 - MER3 DNA MER1_type 0 209 6 643 303 4 13 chr20 37025526 37025754 -29642251 - L1ME LINE L1 -334 5787 5562 895 314 73 30 chr20 37026121 37026561 -29641444 + MARNA DNA Mariner 110 568 -18 2476 68 0 7 chr20 37026620 37026914 -29641091 - AluSq SINE Alu -17 296 5 328 203 38 0 chr20 37026946 37027025 -29640980 - Charlie5 DNA MER1_type 0 2624 2543 887 156 0 35 chr20 37027032 37027193 -29640812 + FRAM SINE Alu 20 176 0 2774 103 55 30 chr20 37027207 37027713 -29640292 - L1MB4 LINE L1 -6 6174 5656 1604 163 37 50 chr20 37027715 37028015 -29639990 - AluJb SINE Alu -16 296 1 1897 127 11 4 chr20 37028076 37028344 -29639661 - AluJo SINE Alu -34 278 9 838 176 59 14 chr20 37028345 37028553 -29639452 - MER33 DNA MER1_type -250 74 1 385 358 18 22 chr20 37028699 37028925 -29639080 - L2 LINE L2 -220 3052 2828 659 224 260 22 chr20 37028947 37029562 -29638443 + L2 LINE L2 2549 3311 -2 251 269 34 17 chr20 37029675 37029794 -29638211 - L1MC4 LINE L1 -2 8040 7920 2069 113 25 0 chr20 37029834 37030139 -29637866 + AluSx SINE Alu 1 312 0 343 286 73 50 chr20 37030777 37030997 -29637008 - L2 LINE L2 -236 3036 2812 527 296 40 10 chr20 37031130 37031438 -29636567 - L1MC5 LINE L1 -393 7415 7247 1192 251 83 72 chr20 37031445 37031889 -29636116 - L1MC4 LINE L1 -733 7228 6791 1902 166 10 0 chr20 37031889 37032184 -29635821 - AluJb SINE Alu -14 298 1 1192 251 83 72 chr20 37032184 37032542 -29635463 - L1MC4 LINE L1 -1170 6791 6439 1988 191 157 2 chr20 37032542 37033025 -29634980 - MER68 LTR ERV1 -4 558 1 1192 251 83 72 chr20 37033025 37033595 -29634410 - L1MC4 LINE L1 -1522 6439 5843 405 286 72 63 chr20 37033687 37034005 -29634000 - L2 LINE L2 -914 2400 2080 357 207 162 9 chr20 37035664 37035775 -29632230 + MER117 DNA MER1_type 14 141 -56 475 204 96 64 chr20 37035825 37035933 -29632072 - MER5B DNA MER1_type 0 178 62 2032 134 10 16 chr20 37035933 37036239 -29631766 - AluJo SINE Alu -8 304 1 475 204 96 64 chr20 37036239 37036287 -29631718 - MER5B DNA MER1_type -116 62 17 2181 117 3 0 chr20 37036467 37036758 -29631247 + AluSx SINE Alu 19 310 -2 376 261 148 30 chr20 37037984 37038214 -29629791 - MLT1K LTR MaLR -2 586 330 2317 90 6 34 chr20 37040438 37040760 -29627245 - AluSp SINE Alu 0 313 1 238 303 100 68 chr20 37040886 37041137 -29626868 - L2 LINE L2 -728 2586 2328 304 326 182 6 chr20 37041430 37041611 -29626394 + MIR SINE MIR 49 261 -1 968 201 0 0 chr20 37041614 37041783 -29626222 - FAM SINE Alu -6 169 1 234 62 0 0 chr20 37041970 37042002 -29626003 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 2401 65 24 0 chr20 37042070 37042362 -29625643 + AluY SINE Alu 1 299 -12 2171 120 3 3 chr20 37042396 37042687 -29625318 + AluSq SINE Alu 1 291 -22 180 0 0 0 chr20 37043519 37043539 -29624466 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 576 213 188 20 chr20 37044090 37044292 -29623713 - Charlie8 DNA MER1_type -2181 236 1 446 289 63 26 chr20 37044866 37045056 -29622949 - MIR SINE MIR -26 236 40 214 299 39 13 chr20 37046709 37046786 -29621219 - MIR3 SINE MIR -17 191 113 289 322 74 43 chr20 37047033 37047291 -29620714 - L2 LINE L2 -16 3256 2991 435 274 115 29 chr20 37047523 37047731 -29620274 + L2 LINE L2 1996 2221 -1093 1357 155 133 52 chr20 37047731 37047771 -29620234 - MLT2B1 LTR ERVL -8 507 472 2351 99 0 0 chr20 37047771 37048064 -29619941 - AluSx SINE Alu -18 294 2 1357 155 133 52 chr20 37048064 37048447 -29619558 - MLT2B1 LTR ERVL -43 472 1 552 240 123 28 chr20 37048447 37048626 -29619379 + L2 LINE L2 2213 2408 -906 4918 153 32 61 chr20 37048635 37048823 -29619182 - L1MA9 LINE L1 -25 6287 6095 968 179 11 139 chr20 37048823 37049096 -29618909 - MER8 DNA MER2_type 0 239 2 4918 153 32 61 chr20 37049096 37049369 -29618636 - L1MA9 LINE L1 -217 6095 5815 2290 103 30 0 chr20 37049369 37049670 -29618335 - AluSg SINE Alu 0 310 1 2510 81 0 0 chr20 37049680 37049988 -29618017 - AluY SINE Alu -3 308 1 4918 153 32 61 chr20 37049988 37050761 -29617244 - L1MA9 LINE L1 -506 5806 5011 656 152 7 90 chr20 37050761 37050906 -29617099 + AluJo SINE Alu 1 133 -169 4918 153 32 61 chr20 37050906 37051090 -29616915 - L1MA9 LINE L1 -1301 5011 4823 1832 161 38 0 chr20 37051090 37051381 -29616624 - AluJo SINE Alu -10 302 1 4918 153 32 61 chr20 37051381 37051804 -29616201 - L1MA9 LINE L1 -1489 4823 4490 971 209 224 16 chr20 37051805 37052188 -29615817 + L2 LINE L2 2412 2874 -440 643 148 0 33 chr20 37052266 37052388 -29615617 - L1MB5 LINE L1 0 6174 6057 1878 170 0 0 chr20 37052396 37052685 -29615320 - AluJo SINE Alu -23 289 1 927 168 27 132 chr20 37052686 37052715 -29615290 + L1ME2 LINE L1 5557 5587 -577 1639 74 4 0 chr20 37052715 37052945 -29615060 + L1PA14 LINE L1 5928 6158 -3 927 168 27 132 chr20 37052945 37053208 -29614797 + L1ME2 LINE L1 5587 5813 -351 1004 173 0 12 chr20 37053208 37053376 -29614629 + AluJo SINE Alu 137 302 0 927 168 27 132 chr20 37053376 37053415 -29614590 + L1ME2 LINE L1 5813 5854 -310 1939 121 5 88 chr20 37053417 37053683 -29614322 + MER47A DNA MER2_type 25 312 -2011 1367 192 84 34 chr20 37053683 37053980 -29614025 - AluJo SINE Alu 0 312 1 1939 121 5 88 chr20 37053980 37053998 -29614007 + MER47A DNA MER2_type 312 330 -1993 1434 112 100 4 chr20 37053998 37054257 -29613748 - L1MA3 LINE L1 -7 6298 6015 1939 121 5 88 chr20 37054257 37054344 -29613661 + MER47A DNA MER2_type 330 366 0 689 220 125 78 chr20 37054346 37054481 -29613524 + L1ME2 LINE L1 5905 6057 -107 1835 172 7 3 chr20 37054481 37054777 -29613228 - AluJb SINE Alu -7 305 9 689 220 125 78 chr20 37054777 37054873 -29613132 + L1ME2 LINE L1 6057 6147 -17 525 121 66 0 chr20 37054894 37054985 -29613020 + FLAM_A SINE Alu 43 139 -3 365 298 127 17 chr20 37054986 37055167 -29612838 - MIR SINE MIR -14 248 48 2452 65 10 0 chr20 37055173 37055481 -29612524 + AluY SINE Alu 1 311 0 368 245 26 21 chr20 37055537 37055656 -29612349 - MIR SINE MIR -66 142 40 1915 146 0 35 chr20 37056378 37056693 -29611312 + AluJo SINE Alu 1 304 -8 186 296 28 28 chr20 37057110 37057181 -29610824 + MIR3 SINE MIR 107 177 -31 257 248 101 101 chr20 37057332 37057570 -29610435 - L2 LINE L2 -9 3263 3026 1996 127 10 27 chr20 37058072 37058372 -29609633 - AluSx SINE Alu -15 297 3 379 263 134 28 chr20 37058773 37058860 -29609145 + MIR SINE MIR 65 141 -121 1134 161 52 26 chr20 37058860 37059090 -29608915 + MER46A DNA MER2_type 1 236 0 379 263 134 28 chr20 37059090 37059181 -29608824 + MIR SINE MIR 141 262 0 630 276 103 13 chr20 37059189 37059566 -29608439 + L2 LINE L2 2299 2709 -605 909 103 8 0 chr20 37059570 37059696 -29608309 + FLAM_C SINE Alu 11 137 -6 1041 147 0 0 chr20 37059929 37060079 -29607926 - FRAM SINE Alu -4 172 23 942 151 14 0 chr20 37060146 37060292 -29607713 + FRAM SINE Alu 22 169 -7 219 348 0 0 chr20 37060447 37060516 -29607489 + L2 LINE L2 3142 3210 -62 210 146 0 0 chr20 37060576 37060617 -29607388 + MIR SINE MIR 80 120 -142 2225 97 3 19 chr20 37061722 37062030 -29605975 - AluSx SINE Alu -9 303 1 879 184 32 0 chr20 37062176 37062334 -29605671 - AluJb SINE Alu -11 301 139 334 279 157 7 chr20 37062569 37062716 -29605289 + LTR16C LTR ERVL 323 491 0 1447 127 111 94 chr20 37063210 37063517 -29604488 + AluJo SINE Alu 1 312 0 648 122 24 8 chr20 37063522 37063645 -29604360 + GA-rich Low_complexity Low_complexity 1 125 0 988 179 0 12 chr20 37063648 37063821 -29604184 + FRAM SINE Alu 1 170 -6 2365 107 7 0 chr20 37063885 37064194 -29603811 + AluSq SINE Alu 3 313 0 1153 156 6 0 chr20 37064411 37064584 -29603421 + AluJb SINE Alu 134 307 -5 395 216 155 7 chr20 37064704 37064852 -29603153 - MIR SINE MIR -79 183 14 238 275 50 0 chr20 37065074 37065154 -29602851 - MIR SINE MIR -91 117 34 210 165 55 121 chr20 37065216 37065307 -29602698 + L2 LINE L2 3169 3253 -19 2017 138 10 7 chr20 37065998 37066296 -29601709 - AluJo SINE Alu -12 300 2 199 324 120 14 chr20 37066414 37066556 -29601449 - MIR SINE MIR 0 262 106 374 320 20 7 chr20 37066821 37066968 -29601037 + MIR3 SINE MIR 44 192 -16 1976 140 96 117 chr20 37067068 37067198 -29600807 - L1MC3 LINE L1 -96 7689 7558 2247 122 0 0 chr20 37067198 37067501 -29600504 - AluSx SINE Alu -8 304 2 1976 140 96 117 chr20 37067501 37067638 -29600367 - L1MC3 LINE L1 -227 7558 7420 2389 110 0 0 chr20 37067638 37067947 -29600058 - AluSc SINE Alu 0 309 1 1879 149 7 36 chr20 37067947 37068256 -29599749 - AluJb SINE Alu -12 300 1 1976 140 96 117 chr20 37068256 37068506 -29599499 - L1MC3 LINE L1 -363 7422 7181 278 271 83 0 chr20 37068507 37068603 -29599402 - MLT1F1 LTR MaLR -451 116 13 2509 85 0 0 chr20 37068855 37069160 -29598845 - AluSx SINE Alu -7 305 1 377 259 120 32 chr20 37069176 37069334 -29598671 + MIR SINE MIR 45 216 -46 219 254 0 0 chr20 37069620 37069675 -29598330 + MIR SINE MIR 68 122 -86 430 143 205 148 chr20 37069968 37070055 -29597950 - L1MC1 LINE L1 -113 7659 7578 1697 137 35 28 chr20 37070055 37070340 -29597665 - AluJb SINE Alu -25 287 1 430 143 205 148 chr20 37070340 37070476 -29597529 - L1MC1 LINE L1 -194 7578 6145 1951 150 0 36 chr20 37071021 37071328 -29596677 - AluJo SINE Alu -16 296 1 372 164 15 0 chr20 37071494 37071561 -29596444 + L2 LINE L2 3227 3294 -19 227 214 104 14 chr20 37071575 37071716 -29596289 - L2 LINE L2 -263 3009 2858 355 259 120 0 chr20 37072499 37072607 -29595398 - MIR SINE MIR -61 147 27 277 331 45 28 chr20 37072676 37072854 -29595151 - L2 LINE L2 -167 3105 2925 287 315 176 0 chr20 37073080 37073245 -29594760 - MIR SINE MIR -63 199 6 861 266 10 0 chr20 37073297 37073504 -29594501 + MER63A DNA MER1_type 2 210 0 231 304 111 22 chr20 37073814 37073949 -29594056 - MIR SINE MIR -77 185 39 222 154 26 0 chr20 37074077 37074116 -29593889 + MIR SINE MIR 108 147 -61 284 276 59 40 chr20 37074590 37074742 -29593263 + MIR SINE MIR 108 262 0 180 0 0 0 chr20 37075056 37075076 -29592929 + (TCC)n Simple_repeat Simple_repeat 1 20 0 300 292 17 0 chr20 37075145 37075265 -29592740 + (CCCG)n Simple_repeat Simple_repeat 2 123 0 21 36 0 0 chr20 37075614 37075642 -29592363 + GC_rich Low_complexity Low_complexity 1 28 0 208 257 37 73 chr20 37075919 37076028 -29591977 + MIR3 SINE MIR 50 154 -54 191 265 0 20 chr20 37076441 37076490 -29591515 + L2 LINE L2 3266 3313 0 299 337 11 0 chr20 37076584 37076676 -29591329 + MIR SINE MIR 64 156 -106 448 255 17 46 chr20 37076697 37076850 -29591155 - MIR SINE MIR -62 146 17 182 299 126 0 chr20 37077504 37077591 -29590414 - L2 LINE L2 -214 3058 2961 461 284 24 50 chr20 37077792 37078049 -29589956 - L2 LINE L2 -256 3016 2768 395 312 134 10 chr20 37078374 37078576 -29589429 + MIR SINE MIR 24 250 -12 357 356 9 0 chr20 37078873 37078988 -29589017 - MIR SINE MIR -63 145 30 189 398 0 0 chr20 37079540 37079623 -29588382 + MIR3 SINE MIR 81 163 -45 635 209 7 0 chr20 37079750 37079889 -29588116 + MER117 DNA MER1_type 58 197 0 229 341 182 8 chr20 37079889 37080021 -29587984 - MIR3 SINE MIR -48 160 6 189 241 66 80 chr20 37080041 37080178 -29587827 + MIR3 SINE MIR 1 135 -73 302 188 31 0 chr20 37080236 37080300 -29587705 + MIR SINE MIR 81 146 -62 301 270 117 0 chr20 37080721 37080832 -29587173 - MIR SINE MIR -109 153 30 586 318 64 26 chr20 37081016 37081249 -29586756 + MIR SINE MIR 5 246 -16 300 246 0 0 chr20 37082310 37082375 -29585630 - MIR SINE MIR -63 145 81 277 311 219 0 chr20 37082576 37082695 -29585310 - MIR SINE MIR -71 191 47 721 229 32 19 chr20 37082808 37083028 -29584977 + MIR SINE MIR 36 262 0 201 331 105 15 chr20 37082988 37083121 -29584884 - MIR SINE MIR -34 228 84 * 226 222 0 19 chr20 37083162 37083216 -29584789 - MIR SINE MIR -68 140 88 535 346 24 5 chr20 37083233 37083438 -29584567 + MIR SINE MIR 46 254 -8 245 305 73 33 chr20 37083761 37083912 -29584093 + MIR SINE MIR 67 223 -39 345 327 121 27 chr20 37084567 37084864 -29583141 - L2 LINE L2 -109 3163 2839 183 276 35 0 chr20 37085112 37085170 -29582835 - L2 LINE L2 -218 3054 2995 495 265 114 12 chr20 37085809 37085975 -29582030 + MIR SINE MIR 29 211 -51 261 0 0 0 chr20 37086379 37086408 -29581597 + (TCCA)n Simple_repeat Simple_repeat 4 32 0 260 298 57 44 chr20 37086564 37086722 -29581283 - L2 LINE L2 -128 3144 2985 514 233 99 16 chr20 37086736 37087110 -29580895 - L2 LINE L2 -254 3059 2641 227 362 60 9 chr20 37087101 37087217 -29580788 + MIR SINE MIR 141 262 0 * 181 370 34 8 chr20 37087381 37087500 -29580505 - MIR SINE MIR -119 143 22 776 251 181 35 chr20 37088213 37088820 -29579185 - L2 LINE L2 -1 3312 2606 466 272 47 39 chr20 37088942 37089174 -29578831 - L1MC5 LINE L1 -83 7878 7645 1804 131 10 45 chr20 37089186 37089498 -29578507 - AluJo SINE Alu -1 311 11 332 306 129 8 chr20 37089573 37089697 -29578308 + MIR SINE MIR 110 248 -14 956 265 9 0 chr20 37089722 37089945 -29578060 - MIR SINE MIR -2 260 36 1671 171 9 29 chr20 37091018 37091334 -29576671 - AluJo SINE Alu -2 310 1 215 300 29 0 chr20 37091524 37091594 -29576411 + MIR SINE MIR 78 149 -59 209 214 0 0 chr20 37091857 37091899 -29576106 - MIR SINE MIR -104 158 117 222 299 153 6 chr20 37091944 37092101 -29575904 + L2 LINE L2 2920 3099 -173 313 217 0 0 chr20 37092812 37092872 -29575133 + MIR SINE MIR 84 143 -119 505 271 88 24 chr20 37093176 37093346 -29574659 + MIR SINE MIR 22 202 -60 209 319 14 0 chr20 37093565 37093634 -29574371 + MIR SINE MIR 76 145 -63 275 385 30 12 chr20 37093812 37093978 -29574027 + L2 LINE L2 2917 3085 -187 642 279 51 28 chr20 37094045 37094260 -29573745 - MIR SINE MIR -3 259 40 468 0 0 0 chr20 37094293 37094345 -29573660 + (CA)n Simple_repeat Simple_repeat 2 53 0 1750 170 10 3 chr20 37094563 37094857 -29573148 - AluJo SINE Alu -16 296 1 686 271 164 26 chr20 37094861 37095318 -29572687 - L1MC4a LINE L1 -1870 5938 5419 7888 181 65 54 chr20 37095331 37096063 -29571942 - L1MB8 LINE L1 -7 6171 5449 1621 152 86 24 chr20 37096063 37096353 -29571652 - AluJo SINE Alu -4 308 1 7888 181 65 54 chr20 37096353 37096485 -29571520 - L1MB8 LINE L1 -729 5449 5320 795 197 0 0 chr20 37096485 37096612 -29571393 - FLAM_A SINE Alu -6 127 1 1623 178 20 10 chr20 37096616 37096908 -29571097 - AluJo SINE Alu -8 304 10 7888 181 65 54 chr20 37096908 37097109 -29570896 - L1MB8 LINE L1 -860 5318 5121 2269 107 0 0 chr20 37097109 37097419 -29570586 + AluSx SINE Alu 1 310 -2 7888 181 65 54 chr20 37097419 37097514 -29570491 - L1MB8 LINE L1 -1057 5121 5029 2760 10 0 0 chr20 37097514 37097824 -29570181 - AluYa8 SINE Alu 0 310 1 7888 181 65 54 chr20 37097824 37098761 -29569244 - L1MB8 LINE L1 -1149 5029 4104 2177 125 0 3 chr20 37098761 37099073 -29568932 - AluSx SINE Alu -1 311 1 7888 181 65 54 chr20 37099073 37099266 -29568739 - L1MB8 LINE L1 -2074 4104 3915 2160 107 0 0 chr20 37099266 37099557 -29568448 + AluSx SINE Alu 1 291 -21 7888 181 65 54 chr20 37099557 37099949 -29568056 - L1MB8 LINE L1 -2263 3915 3529 2213 101 3 19 chr20 37099949 37100267 -29567738 - AluSq SINE Alu 0 313 1 7888 181 65 54 chr20 37100267 37100664 -29567341 - L1MB8 LINE L1 -2649 3529 3138 2146 116 10 7 chr20 37100664 37100974 -29567031 - AluSq SINE Alu -2 311 1 1453 144 76 43 chr20 37100976 37101253 -29566752 - AluJb SINE Alu -18 294 9 7888 181 65 54 chr20 37101253 37101638 -29566367 - L1MB8 LINE L1 -3040 3138 2661 375 197 51 7 chr20 37101641 37101781 -29566224 - L1MC4a LINE L1 -720 5436 5287 404 336 41 33 chr20 37101793 37102107 -29565898 - L1MCa LINE L1 -1339 6983 1995 363 315 0 22 chr20 37102029 37102121 -29565884 + L1MC4 LINE L1 6614 6703 -1339 * 345 352 0 0 chr20 37102116 37102204 -29565801 - L1MC4 LINE L1 -1340 6702 6615 * 256 233 0 23 chr20 37102217 37102303 -29565702 + (CA)n Simple_repeat Simple_repeat 2 85 0 364 279 35 0 chr20 37102303 37102389 -29565616 - L1MC4 LINE L1 -1339 6703 6615 304 156 13 104 chr20 37102371 37102448 -29565557 - L1MCa LINE L1 -4362 2064 1995 * 862 148 8 0 chr20 37102455 37102583 -29565422 - AluJb SINE Alu -183 129 1 456 325 63 20 chr20 37102589 37103055 -29564950 - L1MC4a LINE L1 -1102 5044 4554 2191 105 0 0 chr20 37103055 37103351 -29564654 - AluSg SINE Alu -14 296 1 456 325 63 20 chr20 37103351 37103376 -29564629 - L1MC4a LINE L1 -1592 4554 4532 550 297 57 52 chr20 37103377 37103543 -29564462 - L1MC4a LINE L1 -1776 4370 4201 2134 134 0 0 chr20 37103543 37103848 -29564157 - AluSx SINE Alu -7 305 1 550 297 57 52 chr20 37103848 37103893 -29564112 - L1MC4a LINE L1 -1945 4201 4158 2338 104 0 0 chr20 37103896 37104204 -29563801 - AluSx SINE Alu -4 308 1 1810 169 0 19 chr20 37104204 37104511 -29563494 - AluJb SINE Alu -11 301 1 754 199 0 7 chr20 37104512 37104648 -29563357 - AluJb SINE Alu -177 135 1 2106 169 21 21 chr20 37104709 37105081 -29562924 - MLT1A2 LTR MaLR 0 374 3 314 239 300 22 chr20 37105285 37105465 -29562540 - MIR SINE MIR 0 262 33 2109 112 3 0 chr20 37105489 37105776 -29562229 - AluSq SINE Alu -25 288 1 565 280 36 18 chr20 37105953 37106121 -29561884 + MIR SINE MIR 58 228 -34 457 258 98 0 chr20 37106256 37106388 -29561617 - MIR SINE MIR -110 152 8 1243 99 26 0 chr20 37106857 37107048 -29560957 - L1MA3 LINE L1 0 6305 6110 253 148 19 0 chr20 37107048 37107102 -29560903 - Alu SINE Alu -3 299 245 1327 121 97 0 chr20 37107124 37107330 -29560675 - AluJo SINE Alu 0 312 87 372 299 51 8 chr20 37107362 37107479 -29560526 - MIR SINE MIR -24 238 117 319 345 53 12 chr20 37107501 37107672 -29560333 - L1MC4a LINE L1 -1910 5898 5721 242 295 0 0 chr20 37107882 37107943 -29560062 + L2 LINE L2 3209 3269 -3 1597 110 4 0 chr20 37108492 37108720 -29559285 + AluSg/x SINE Alu 76 304 -6 1277 112 0 0 chr20 37108720 37108899 -29559106 + AluSg/x SINE Alu 132 310 0 312 91 0 0 chr20 37108916 37108960 -29559045 + (A)n Simple_repeat Simple_repeat 1 44 0 251 220 0 0 chr20 37109057 37109107 -29558898 + MIR SINE MIR 110 159 -103 601 337 6 0 chr20 37109330 37109502 -29558503 + MIR SINE MIR 80 252 -10 216 359 13 0 chr20 37109592 37109670 -29558335 - L2 LINE L2 -1 3271 3193 337 276 8 79 chr20 37109756 37109883 -29558122 + L1ME4a LINE L1 5974 6091 -30 272 303 272 10 chr20 37109885 37110080 -29557925 - MIR SINE MIR -1 261 16 365 247 142 12 chr20 37110318 37110480 -29557525 - L3 LINE CR1 -24 1553 1371 26 0 0 0 chr20 37110482 37110508 -29557497 + AT_rich Low_complexity Low_complexity 1 26 0 196 350 21 21 chr20 37110890 37111030 -29556975 - MIR3 SINE MIR -21 187 48 616 207 40 33 chr20 37111240 37111390 -29556615 - MIR SINE MIR -108 154 4 457 299 49 0 chr20 37111546 37111690 -29556315 - MIR SINE MIR -78 184 34 611 309 111 33 chr20 37111984 37112317 -29555688 - L2 LINE L2 0 3272 2914 255 207 195 0 chr20 37112412 37112494 -29555511 - L2 LINE L2 -4 3268 3171 259 300 50 12 chr20 37112592 37112672 -29555333 - MIR SINE MIR -89 173 91 2085 109 0 13 chr20 37112696 37113009 -29554996 - AluSx SINE Alu -3 309 1 232 286 83 24 chr20 37114311 37114395 -29553610 - L2 LINE L2 0 3272 3184 205 235 0 0 chr20 37114661 37114712 -29553293 - L2 LINE L2 -1 3312 3262 202 283 0 0 chr20 37115364 37115424 -29552581 + CT-rich Low_complexity Low_complexity 2 61 0 330 357 21 0 chr20 37116139 37116282 -29551723 + L2 LINE L2 2900 3045 -268 575 207 5 0 chr20 37116388 37116520 -29551485 - MIR SINE MIR -62 146 15 258 284 115 54 chr20 37116607 37116755 -29551250 + L2 LINE L2 3116 3272 0 796 214 20 11 chr20 37116773 37116997 -29551008 - MIR SINE MIR -9 253 30 2054 112 3 7 chr20 37117437 37117731 -29550274 + AluJo SINE Alu 1 293 -19 333 327 36 0 chr20 37118717 37118827 -29549178 - MIR SINE MIR -72 136 23 236 191 0 0 chr20 37119013 37119055 -29548950 - MIR SINE MIR -109 153 112 416 271 0 34 chr20 37119122 37119240 -29548765 - MIR SINE MIR -92 170 57 2090 116 3 26 chr20 37119362 37119672 -29548333 - AluSx SINE Alu -3 309 7 301 296 24 24 chr20 37119720 37119845 -29548160 - MIR SINE MIR -125 137 13 436 313 15 0 chr20 37120317 37120448 -29547557 + MIR3 SINE MIR 38 170 -38 292 169 0 31 chr20 37120471 37120536 -29547469 + MIR SINE MIR 78 140 -68 2342 92 0 0 chr20 37120545 37120850 -29547155 + AluSx SINE Alu 1 305 -7 212 222 37 0 chr20 37120874 37120928 -29547077 + MIR SINE MIR 81 136 -72 309 139 23 116 chr20 37121612 37121698 -29546307 + MIR SINE MIR 77 155 -53 234 277 36 0 chr20 37121829 37121941 -29546064 + CT-rich Low_complexity Low_complexity 2 117 0 287 258 62 0 chr20 37122139 37122236 -29545769 + MIR3 SINE MIR 66 168 -40 221 327 139 64 chr20 37122395 37122661 -29545344 - L3 LINE CR1 -13 1564 1279 215 319 123 14 chr20 37123299 37123437 -29544568 - L2 LINE L2 -248 3024 2872 183 244 22 0 chr20 37123456 37123501 -29544504 + MIR SINE MIR 103 148 -114 234 256 12 12 chr20 37123855 37123937 -29544068 + (TG)n Simple_repeat Simple_repeat 1 82 0 319 289 35 8 chr20 37124102 37124248 -29543757 + MIR SINE MIR 2 131 -77 425 282 179 0 chr20 37124730 37124886 -29543119 - MIR SINE MIR -8 254 71 409 281 16 23 chr20 37125384 37125512 -29542493 + CT-rich Low_complexity Low_complexity 4 130 0 380 317 145 20 chr20 37126001 37126397 -29541608 + L2 LINE L2 2727 3176 -96 201 283 28 97 chr20 37127011 37127156 -29540849 + MIR SINE MIR 27 161 -101 629 279 93 13 chr20 37128049 37128275 -29539730 - MIR SINE MIR 0 262 19 2148 118 0 3 chr20 37128522 37128819 -29539186 - AluSx SINE Alu -16 296 1 414 353 12 18 chr20 37128868 37129035 -29538970 - MIR SINE MIR -72 190 25 1612 158 16 0 chr20 37129391 37129644 -29538361 - AluJo SINE Alu -44 268 12 1161 206 134 18 chr20 37129684 37129952 -29538053 - L1ME1 LINE L1 -5 6161 5833 1794 161 0 37 chr20 37129952 37130276 -29537729 - AluJo SINE Alu 0 312 1 1161 206 134 18 chr20 37130276 37130395 -29537610 - L1ME1 LINE L1 -333 5833 5729 349 260 89 24 chr20 37130948 37131071 -29536934 - MIR SINE MIR -24 238 108 202 223 48 47 chr20 37131592 37131682 -29536323 + MIR SINE MIR 86 137 -71 297 170 178 42 chr20 37131873 37131971 -29536034 + MIR3 SINE MIR 44 155 -53 386 288 50 7 chr20 37132966 37133105 -29534900 - MIR3 SINE MIR -21 187 43 196 323 122 49 chr20 37133263 37133427 -29534578 + L3 LINE CR1 1313 1488 -89 203 191 225 11 chr20 37133720 37133809 -29534196 + MIR SINE MIR 33 140 -68 213 121 0 0 chr20 37133848 37133881 -29534124 + (TG)n Simple_repeat Simple_repeat 2 34 0 273 75 0 0 chr20 37135120 37135160 -29532845 + (TG)n Simple_repeat Simple_repeat 2 41 0 603 163 42 58 chr20 37135882 37136059 -29531946 - L1PB3 LINE L1 0 6156 5990 279 298 8 41 chr20 37136059 37136110 -29531895 + CT-rich Low_complexity Low_complexity 2 53 -65 1509 153 46 18 chr20 37136110 37136391 -29531614 - AluJo SINE Alu -23 289 1 279 298 8 41 chr20 37136391 37136460 -29531545 + CT-rich Low_complexity Low_complexity 53 118 0 338 329 25 41 chr20 37136468 37136711 -29531294 + L2 LINE L2 2823 3061 -211 206 148 74 0 chr20 37137324 37137378 -29530627 + (TG)n Simple_repeat Simple_repeat 2 59 0 360 164 0 0 chr20 37137509 37137576 -29530429 + (CA)n Simple_repeat Simple_repeat 1 67 0 223 302 0 0 chr20 37138099 37138162 -29529843 + (TG)n Simple_repeat Simple_repeat 1 63 0 2152 114 0 16 chr20 37138566 37138873 -29529132 - AluSc SINE Alu -7 302 1 827 175 100 0 chr20 37139027 37139227 -29528778 + ORSL DNA AcHobo 9 228 -47 204 125 0 0 chr20 37139387 37139419 -29528586 + (TG)n Simple_repeat Simple_repeat 1 32 0 2071 135 0 6 chr20 37139473 37139785 -29528220 - AluJb SINE Alu -2 310 1 198 0 0 0 chr20 37139836 37139858 -29528147 + (TTCA)n Simple_repeat Simple_repeat 2 23 0 366 23 0 0 chr20 37140135 37140178 -29527827 + (TG)n Simple_repeat Simple_repeat 1 43 0 222 105 0 0 chr20 37140346 37140384 -29527621 + (TG)n Simple_repeat Simple_repeat 1 38 0 277 194 40 57 chr20 37140469 37140593 -29527412 + (GTGTG)n Simple_repeat Simple_repeat 5 126 0 511 71 36 0 chr20 37140683 37140767 -29527238 + (TTCCC)n Simple_repeat Simple_repeat 4 90 0 374 254 8 32 chr20 37140848 37140974 -29527031 + (TCTCTG)n Simple_repeat Simple_repeat 4 126 0 599 219 6 0 chr20 37141071 37141249 -29526756 + (TG)n Simple_repeat Simple_repeat 1 179 0 381 151 0 0 chr20 37141594 37141680 -29526325 + (TG)n Simple_repeat Simple_repeat 1 86 0 189 0 0 0 chr20 37141804 37141825 -29526180 + (TG)n Simple_repeat Simple_repeat 2 22 0 191 289 88 44 chr20 37141933 37142047 -29525958 - L3b LINE CR1 -174 1409 1291 225 154 0 0 chr20 37142067 37142106 -29525899 + (TG)n Simple_repeat Simple_repeat 1 39 0 226 225 0 0 chr20 37142284 37142324 -29525681 + (TCCA)n Simple_repeat Simple_repeat 1 40 0 421 243 9 9 chr20 37142933 37143044 -29524961 - L1ME3 LINE L1 -6 6156 6046 207 0 0 0 chr20 37143350 37143373 -29524632 + (TG)n Simple_repeat Simple_repeat 1 23 0 202 228 18 18 chr20 37143398 37143455 -29524550 + CT-rich Low_complexity Low_complexity 2 58 0 186 157 29 29 chr20 37144772 37144842 -29523163 + (TCTG)n Simple_repeat Simple_repeat 4 73 0 689 239 88 62 chr20 37145816 37146088 -29521917 + L2 LINE L2 3033 3311 -2 216 179 0 0 chr20 37146994 37147033 -29520972 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 261 0 0 0 chr20 37147104 37147133 -29520872 + (CA)n Simple_repeat Simple_repeat 2 30 0 333 125 0 0 chr20 37147261 37147317 -29520688 + (TG)n Simple_repeat Simple_repeat 2 57 0 305 345 123 38 chr20 37147470 37147893 -29520112 - HAL1 LINE L1 -1219 1288 830 639 179 0 0 chr20 37147974 37148153 -29519852 + (TG)n Simple_repeat Simple_repeat 2 180 0 762 178 2 7 chr20 37148214 37148665 -29519340 + (TG)n Simple_repeat Simple_repeat 1 448 0 527 259 4 0 chr20 37149676 37149916 -29518089 + (TG)n Simple_repeat Simple_repeat 1 241 0 245 229 0 43 chr20 37150016 37150086 -29517919 - L1ME4a LINE L1 0 6121 6055 201 204 0 80 chr20 37150238 37150326 -29517679 + (TCTCTG)n Simple_repeat Simple_repeat 1 81 0 282 116 0 0 chr20 37150642 37150685 -29517320 + (TG)n Simple_repeat Simple_repeat 2 44 0 350 85 37 12 chr20 37151094 37151176 -29516829 + (TG)n Simple_repeat Simple_repeat 1 84 0 337 295 7 58 chr20 37151281 37151420 -29516585 - L1ME4a LINE L1 -1 6120 5989 228 86 0 0 chr20 37151631 37151666 -29516339 + (TG)n Simple_repeat Simple_repeat 1 35 0 685 195 4 4 chr20 37153077 37153349 -29514656 + GA-rich Low_complexity Low_complexity 1 272 0 303 210 0 0 chr20 37153379 37153479 -29514526 + GA-rich Low_complexity Low_complexity 1 100 0 328 328 78 22 chr20 37154346 37154526 -29513479 + L2 LINE L2 2960 3149 -123 845 267 42 9 chr20 37154580 37154797 -29513208 - MIR SINE MIR -10 252 29 746 293 167 49 chr20 37155613 37156283 -29511722 + L2 LINE L2 1686 2434 -880 969 148 0 13 chr20 37156285 37156440 -29511565 + AluSg/x SINE Alu 130 282 -30 222 37 0 0 chr20 37156441 37156468 -29511537 + (CA)n Simple_repeat Simple_repeat 1 27 0 244 390 75 0 chr20 37156561 37156748 -29511257 + L2 LINE L2 2197 2397 -917 503 371 106 20 chr20 37156798 37157156 -29510849 + L2 LINE L2 522 910 -2404 2271 287 146 15 chr20 37157188 37158495 -29509510 + L2 LINE L2 1816 3300 -13 228 35 0 0 chr20 37158679 37158708 -29509297 + (TG)n Simple_repeat Simple_repeat 1 29 0 206 214 0 0 chr20 37158803 37158845 -29509160 + (TTCA)n Simple_repeat Simple_repeat 2 43 0 692 212 0 11 chr20 37159049 37159228 -29508777 + (TCCA)n Simple_repeat Simple_repeat 1 177 0 866 170 0 11 chr20 37159264 37159446 -29508559 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 315 0 0 0 chr20 37159655 37159690 -29508315 + (TG)n Simple_repeat Simple_repeat 2 36 0 211 378 57 25 chr20 37160050 37160333 -29507672 + L2 LINE L2 2296 2587 -727 257 128 21 0 chr20 37160359 37160406 -29507599 + (TCCA)n Simple_repeat Simple_repeat 4 51 0 1959 137 7 7 chr20 37160583 37160882 -29507123 - AluJb SINE Alu -13 299 1 242 349 23 0 chr20 37161061 37161147 -29506858 + L2 LINE L2 3213 3300 -13 207 0 0 0 chr20 37161331 37161354 -29506651 + (TG)n Simple_repeat Simple_repeat 1 23 0 228 217 0 0 chr20 37161445 37161491 -29506514 + (TTCA)n Simple_repeat Simple_repeat 2 47 0 2053 133 0 10 chr20 37162415 37162724 -29505281 - AluJb SINE Alu -6 306 1 396 0 0 0 chr20 37162967 37163011 -29504994 + (TC)n Simple_repeat Simple_repeat 1 44 0 1105 235 0 4 chr20 37163048 37163308 -29504697 + L1M4 LINE L1 4060 4318 -1828 384 356 21 17 chr20 37163391 37163627 -29504378 - L1MC4a LINE L1 -1878 5930 5694 509 136 75 0 chr20 37165020 37165331 -29502674 + (TCCA)n Simple_repeat Simple_repeat 1 334 0 292 218 69 0 chr20 37165353 37165454 -29502551 + (TCCA)n Simple_repeat Simple_repeat 2 109 0 234 274 204 0 chr20 37165458 37165571 -29502434 - L2 LINE L2 0 3272 3137 351 266 0 0 chr20 37165641 37165754 -29502251 + (TG)n Simple_repeat Simple_repeat 1 113 0 306 306 82 0 chr20 37167364 37167534 -29500471 - LTR33 LTR ERVL -317 204 21 181 279 207 27 chr20 37167959 37168070 -29499935 - L2 LINE L2 -6 3266 3136 530 112 63 7 chr20 37168123 37168266 -29499739 + (TG)n Simple_repeat Simple_repeat 1 151 0 1167 131 0 35 chr20 37169604 37169803 -29498202 + AluJo SINE Alu 99 290 -22 513 289 26 11 chr20 37170108 37170298 -29497707 - L1MC4a LINE L1 -1929 5879 5687 313 280 137 23 chr20 37170493 37170668 -29497337 - LTR33 LTR ERVL 0 521 327 379 217 120 46 chr20 37170759 37170934 -29497071 - LTR33 LTR ERVL -310 211 24 450 0 0 0 chr20 37171313 37171363 -29496642 + (TG)n Simple_repeat Simple_repeat 1 50 0 976 107 9 5 chr20 37171590 37171811 -29496194 + (TCCA)n Simple_repeat Simple_repeat 1 222 0 194 81 27 0 chr20 37172495 37172532 -29495473 + (TCCA)n Simple_repeat Simple_repeat 1 38 0 201 274 123 0 chr20 37173153 37173226 -29494779 - L2 LINE L2 -2280 1034 953 1212 123 0 0 chr20 37173481 37173644 -29494361 - AluJo SINE Alu -21 291 129 871 139 0 40 chr20 37174530 37174681 -29493324 - AluJo SINE Alu -167 145 1 651 125 0 0 chr20 37175689 37175793 -29492212 + (TTCC)n Simple_repeat Simple_repeat 1 104 0 599 145 23 8 chr20 37175807 37175938 -29492067 + (TCCA)n Simple_repeat Simple_repeat 1 133 0 240 318 12 0 chr20 37177056 37177141 -29490864 + L2 LINE L2 3161 3246 -67 456 273 53 0 chr20 37177625 37177775 -29490230 - MER63A DNA MER1_type -25 185 28 219 193 35 18 chr20 37178075 37178132 -29489873 + CT-rich Low_complexity Low_complexity 4 61 0 1467 118 0 0 chr20 37179162 37179681 -29488324 + (TCCA)n Simple_repeat Simple_repeat 1 519 0 191 267 95 17 chr20 37181307 37181423 -29486582 + L2 LINE L2 2866 2990 -282 251 54 27 0 chr20 37181818 37181855 -29486150 + (GGAA)n Simple_repeat Simple_repeat 4 41 0 758 313 116 14 chr20 37183068 37183490 -29484515 + L2 LINE L2 2455 2919 -395 608 286 61 0 chr20 37183490 37183637 -29484368 + MER91A DNA MER1_type 1 156 -40 681 239 70 21 chr20 37183669 37183953 -29484052 - L1MEc LINE L1 -5473 923 626 709 317 54 22 chr20 37183958 37184368 -29483637 - L1MEc LINE L1 -5874 522 100 643 170 89 0 chr20 37184416 37184551 -29483454 + L2 LINE L2 2913 3059 -254 1730 187 28 22 chr20 37184551 37184910 -29483095 + MLT1A2 LTR MaLR 1 361 -13 408 175 75 12 chr20 37185057 37185137 -29482868 + L2 LINE L2 3182 3266 -47 1167 179 51 4 chr20 37185531 37185765 -29482240 - MLT1A1 LTR MaLR 0 365 121 5787 103 9 2 chr20 37185765 37186625 -29481380 - L1PA15 LINE L1 -3 6162 5297 916 132 6 19 chr20 37186627 37186786 -29481219 - MLT1A1 LTR MaLR -208 157 1 1900 175 93 70 chr20 37186902 37187417 -29480588 - MLT1F1 LTR MaLR -24 543 17 1051 100 0 0 chr20 37187417 37187557 -29480448 + AluYa8 SINE Alu 163 302 -8 496 261 54 146 chr20 37187584 37188197 -29479808 - MLT1F1-int LTR MaLR 0 1371 836 1935 169 3 0 chr20 37188197 37188493 -29479512 - AluJb SINE Alu -13 299 3 496 261 54 146 chr20 37188493 37188620 -29479385 - MLT1F1-int LTR MaLR -535 836 699 691 304 43 10 chr20 37188805 37189108 -29478897 - MLT1F1-int LTR MaLR -751 620 308 398 255 38 25 chr20 37189148 37189305 -29478700 - MLT1F1-int LTR MaLR -1211 160 2 2051 196 76 60 chr20 37189307 37189857 -29478148 - MLT1F1 LTR MaLR -1 566 8 2153 140 0 3 chr20 37189934 37190234 -29477771 + AluSx SINE Alu 1 299 -13 1510 205 36 29 chr20 37190366 37190781 -29477224 - L1ME2 LINE L1 -1 6163 5746 959 93 0 36 chr20 37190781 37190920 -29477085 - AluSg/x SINE Alu -2 310 177 225 36 0 0 chr20 37190920 37190948 -29477057 - U2 snRNA snRNA -153 35 8 1572 91 20 0 chr20 37190948 37191145 -29476860 - AluSq SINE Alu -112 201 1 2287 179 16 20 chr20 37191147 37191613 -29476392 - L1ME2 LINE L1 -416 5748 5283 1502 163 28 78 chr20 37191613 37191932 -29476073 - AluJb SINE Alu -9 303 1 2287 179 16 20 chr20 37191932 37191958 -29476047 - L1ME2 LINE L1 -881 5283 5258 1670 212 36 38 chr20 37191945 37192263 -29475742 - L1ME2 LINE L1 -1159 4987 4669 * 2223 93 3 10 chr20 37192263 37192564 -29475441 - AluSq SINE Alu -14 299 1 1670 212 36 38 chr20 37192564 37192693 -29475312 - L1ME2 LINE L1 -1477 4669 4541 277 339 19 0 chr20 37192914 37193031 -29474974 + MIR SINE MIR 35 152 -68 202 393 0 9 chr20 37193101 37193213 -29474792 + L2 LINE L2 1157 1267 -2047 202 275 155 48 chr20 37194029 37194236 -29473769 + L2 LINE L2 1870 2098 -1216 954 158 12 23 chr20 37194267 37194438 -29473567 - FRAM SINE Alu 0 176 8 319 276 9 19 chr20 37194606 37194711 -29473294 + MLT1-int LTR MaLR 484 587 -784 288 221 0 73 chr20 37194826 37194894 -29473111 - L2 LINE L2 0 3272 3210 700 268 16 58 chr20 37195110 37195420 -29472585 + LTR16A1 LTR ERVL 161 457 0 2456 202 66 69 chr20 37195698 37196421 -29471584 + L1ME1 LINE L1 5441 6161 -5 189 0 0 0 chr20 37196429 37196450 -29471555 + (A)n Simple_repeat Simple_repeat 1 21 0 1169 168 79 113 chr20 37196459 37196778 -29471227 + AluJo SINE Alu 1 309 0 999 184 24 5 chr20 37196790 37196997 -29471008 + L1ME3 LINE L1 5545 5755 -407 1385 233 46 6 chr20 37197196 37197544 -29470461 + L1ME3 LINE L1 5778 6139 -23 1396 196 4 29 chr20 37197571 37197851 -29470154 + AluJo SINE Alu 40 312 0 210 159 43 0 chr20 37198208 37198277 -29469728 + CT-rich Low_complexity Low_complexity 3 74 0 354 287 228 0 chr20 37199004 37199206 -29468799 + L2 LINE L2 2669 2916 -398 2397 144 32 40 chr20 37199268 37199365 -29468640 + MLT1C LTR MaLR 1 97 -370 2399 107 0 0 chr20 37199365 37199673 -29468332 + AluSx SINE Alu 1 308 -4 2397 144 32 40 chr20 37199673 37199705 -29468300 + MLT1C LTR MaLR 97 128 -339 2388 125 57 45 chr20 37199705 37200128 -29467877 + MSTA LTR MaLR 1 428 0 2397 144 32 40 chr20 37200128 37200468 -29467537 + MLT1C LTR MaLR 128 467 0 417 291 23 107 chr20 37200471 37200818 -29467187 + L2 LINE L2 2952 3269 -44 2089 124 13 22 chr20 37201445 37201760 -29466245 + AluJo SINE Alu 1 312 0 322 236 49 57 chr20 37203113 37203236 -29464769 + L1MC4a LINE L1 6053 6174 -1634 701 260 50 20 chr20 37203788 37203988 -29464017 + MIR SINE MIR 39 244 -18 252 253 80 80 chr20 37204004 37204127 -29463878 + L2 LINE L2 2340 2465 -849 204 40 0 0 chr20 37204127 37204152 -29463853 + (TCC)n Simple_repeat Simple_repeat 2 26 0 252 253 80 80 chr20 37204152 37204190 -29463815 + L2 LINE L2 2464 2501 -813 378 316 35 65 chr20 37204193 37204503 -29463502 + L2 LINE L2 1822 2122 -1192 181 321 46 53 chr20 37204720 37204851 -29463154 + L2 LINE L2 2650 2779 -535 1394 169 27 71 chr20 37204851 37205258 -29462747 - L1M4 LINE L1 -744 5402 5014 290 293 147 17 chr20 37205362 37205478 -29462527 + L2 LINE L2 2732 2862 -452 564 229 100 57 chr20 37205797 37206257 -29461748 - L1ME4a LINE L1 -196 5925 5393 279 296 22 30 chr20 37206570 37206705 -29461300 - L1P LINE L1 -1134 5012 4879 637 314 150 42 chr20 37208839 37209419 -29458586 + L2 LINE L2 1983 2499 -773 1175 59 0 32 chr20 37209419 37209605 -29458400 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 637 314 150 42 chr20 37209605 37209620 -29458385 + L2 LINE L2 2499 2511 -761 1920 154 0 40 chr20 37209620 37209945 -29458060 - AluSx SINE Alu 0 312 1 637 314 150 42 chr20 37209945 37210488 -29457517 + L2 LINE L2 2511 3264 -8 811 310 47 52 chr20 37210495 37210917 -29457088 + L2 LINE L2 1706 2125 -1189 730 239 28 75 chr20 37210920 37211238 -29456767 + L1M4 LINE L1 4532 4834 -1312 1034 318 33 23 chr20 37211845 37212421 -29455584 - L1ME4a LINE L1 -215 5906 5325 195 42 0 0 chr20 37212633 37212657 -29455348 + (T)n Simple_repeat Simple_repeat 1 24 0 2363 108 0 7 chr20 37212677 37212983 -29455022 + AluSq SINE Alu 1 304 -9 24 32 0 0 chr20 37213033 37213064 -29454941 + AT_rich Low_complexity Low_complexity 1 31 0 278 274 53 44 chr20 37213572 37213685 -29454320 + MIR SINE MIR 39 152 -56 467 325 96 37 chr20 37213742 37214096 -29453909 - L2 LINE L2 -50 3263 2889 2263 99 0 0 chr20 37214106 37214423 -29453582 + AluSx SINE Alu 1 317 0 882 287 136 44 chr20 37215917 37216203 -29451802 + L2 LINE L2 1897 2155 -1159 2187 116 3 0 chr20 37216203 37216495 -29451510 - AluSx SINE Alu -19 293 1 882 287 136 44 chr20 37216495 37217120 -29450885 + L2 LINE L2 2155 2892 -422 2038 85 4 0 chr20 37217133 37217391 -29450614 - AluY SINE Alu -4 307 49 537 261 195 8 chr20 37217393 37217639 -29450366 + MLT1L LTR MaLR 244 613 -2 269 304 243 25 chr20 37217641 37217825 -29450180 + L2 LINE L2 2869 3012 -260 1966 131 3 67 chr20 37217825 37218154 -29449851 - AluJo SINE Alu -4 308 1 269 304 243 25 chr20 37218154 37218249 -29449756 + L2 LINE L2 3012 3209 -63 780 251 144 31 chr20 37218290 37218645 -29449360 - LTR33 LTR ERVL -4 517 123 371 200 0 0 chr20 37218645 37218710 -29449295 - Tigger5 DNA MER2_type 0 2323 2259 2017 144 0 13 chr20 37218722 37219027 -29448978 - AluSx SINE Alu -11 301 1 337 167 0 0 chr20 37219056 37219110 -29448895 - Tigger5 DNA MER2_type -2268 55 2 299 229 101 9 chr20 37219112 37219221 -29448784 - LTR33 LTR ERVL -398 123 5 382 327 89 54 chr20 37219439 37220715 -29447290 + L2 LINE L2 1631 3043 -229 876 252 151 62 chr20 37220857 37220912 -29447093 - MLT1H1 LTR MaLR -13 542 493 1864 185 3 3 chr20 37220912 37221220 -29446785 + AluJb SINE Alu 1 308 -4 876 252 151 62 chr20 37221220 37221683 -29446322 - MLT1H1 LTR MaLR -62 493 13 251 356 64 25 chr20 37222581 37222817 -29445188 + L2 LINE L2 2451 2695 -619 420 317 78 0 chr20 37223023 37223165 -29444840 - MIR SINE MIR -10 252 100 246 274 68 0 chr20 37223432 37223505 -29444500 + MLT1K LTR MaLR 507 584 -4 2264 112 7 7 chr20 37223547 37223852 -29444153 + AluSx SINE Alu 1 305 -7 899 210 18 0 chr20 37224293 37224460 -29443545 - FAM SINE Alu -5 170 1 241 282 91 0 chr20 37224614 37224724 -29443281 - MLT1L LTR MaLR 0 615 496 256 256 47 47 chr20 37224768 37224854 -29443151 - MLT1L LTR MaLR -221 394 309 1861 186 0 3 chr20 37224885 37225186 -29442819 - AluJb SINE Alu -12 300 1 277 228 40 30 chr20 37225515 37225616 -29442389 - HAL1b LINE L1 -500 848 747 21 36 0 0 chr20 37225897 37225925 -29442080 + AT_rich Low_complexity Low_complexity 1 28 0 337 347 6 0 chr20 37226100 37226276 -29441729 + L1MC4a LINE L1 4397 4573 -1573 521 264 122 29 chr20 37226592 37227418 -29440587 + L1MC4a LINE L1 4981 5887 -277 575 280 32 65 chr20 37227822 37228025 -29439980 + L1ME LINE L1 4381 4570 -1576 2236 120 0 0 chr20 37228025 37228324 -29439681 + AluSg SINE Alu 1 299 -11 575 280 32 65 chr20 37228324 37228459 -29439546 + L1ME LINE L1 4570 4708 -1438 195 42 0 0 chr20 37228725 37228749 -29439256 + (CA)n Simple_repeat Simple_repeat 1 24 0 755 267 102 22 chr20 37228756 37229455 -29438550 + L1ME LINE L1 5024 5789 -373 522 318 49 44 chr20 37229959 37230089 -29437916 + L1M4 LINE L1 4358 4486 -1660 207 0 0 0 chr20 37230089 37230112 -29437893 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 522 318 49 44 chr20 37230112 37230317 -29437688 + L1M4 LINE L1 4486 4698 -1448 2267 115 0 3 chr20 37230317 37230622 -29437383 + AluSx SINE Alu 1 304 -8 522 318 49 44 chr20 37230622 37230735 -29437270 + L1M4 LINE L1 4698 4809 -1337 334 254 63 21 chr20 37230777 37230919 -29437086 + L1M4 LINE L1 4905 5052 -1094 191 294 82 44 chr20 37231099 37231224 -29436781 + MIR SINE MIR 20 151 -57 425 321 158 50 chr20 37232102 37233152 -29434853 + L2 LINE L2 2053 3312 -1 839 331 111 4 chr20 37233336 37233831 -29434174 + L2 LINE L2 1862 2409 -905 830 196 0 0 chr20 37233875 37234018 -29433987 + FLAM_C SINE Alu 1 143 0 272 268 83 91 chr20 37234997 37235393 -29432612 + L2 LINE L2 1797 2189 -1125 999 324 143 26 chr20 37235668 37236551 -29431454 + L2 LINE L2 1860 2845 -469 378 0 0 0 chr20 37236834 37236876 -29431129 + (TG)n Simple_repeat Simple_repeat 2 43 0 784 197 0 0 chr20 37236878 37237000 -29431005 - FLAM_C SINE Alu -20 123 2 209 260 80 0 chr20 37237013 37237063 -29430942 + L2 LINE L2 3255 3308 -5 563 260 68 43 chr20 37237108 37237412 -29430593 - L1MC/D LINE L1 -549 5572 5259 565 221 41 0 chr20 37238270 37238392 -29429613 - MIR3 SINE MIR -17 191 65 201 74 0 0 chr20 37238741 37238768 -29429237 + (A)n Simple_repeat Simple_repeat 1 27 0 2240 113 3 3 chr20 37238908 37239210 -29428795 - AluSx SINE Alu -8 304 3 210 344 149 18 chr20 37239787 37240008 -29427997 + MIR SINE MIR 8 257 -5 214 267 37 52 chr20 37241209 37241340 -29426665 + MIR SINE MIR 14 143 -67 295 252 81 49 chr20 37242165 37242288 -29425717 - MIR3 SINE MIR -11 197 71 225 316 138 53 chr20 37244151 37244376 -29423629 + L2 LINE L2 2974 3217 -55 205 234 117 99 chr20 37245278 37245389 -29422616 + L2 LINE L2 3116 3228 -44 355 343 64 17 chr20 37245450 37245622 -29422383 + L1M4 LINE L1 3087 3266 -2880 191 88 29 0 chr20 37248344 37248378 -29419627 + (CAGA)n Simple_repeat Simple_repeat 4 38 0 294 29 0 0 chr20 37248378 37248413 -29419592 + (A)n Simple_repeat Simple_repeat 1 35 0 304 278 92 92 chr20 37250850 37251188 -29416817 + L1M2 LINE L1 1733 2070 -4779 248 203 0 78 chr20 37252515 37252579 -29415426 + L2 LINE L2 3121 3179 -93 228 366 27 27 chr20 37253762 37253874 -29414131 + MIR SINE MIR 18 129 -79 226 175 0 48 chr20 37256783 37256846 -29411159 + (CCG)n Simple_repeat Simple_repeat 3 62 0 292 305 113 82 chr20 37257456 37257810 -29410195 - L2 LINE L2 -2 3311 2947 1078 250 249 20 chr20 37257874 37258558 -29409447 - L2 LINE L2 -516 2798 1959 238 250 259 0 chr20 37258675 37258787 -29409218 - MLT1L LTR MaLR -128 487 347 2040 242 60 13 chr20 37259713 37260312 -29407693 + L1ME3 LINE L1 5476 6102 -60 615 191 0 0 chr20 37260329 37260434 -29407571 + AluSg/x SINE Alu 204 308 -1 2408 110 0 0 chr20 37260491 37260800 -29407205 + AluSg SINE Alu 1 309 -1 373 246 140 68 chr20 37261181 37261398 -29406607 + L2 LINE L2 2443 2643 -629 2162 120 7 3 chr20 37261398 37261698 -29406307 - AluSx SINE Alu -11 301 1 373 246 140 68 chr20 37261698 37261829 -29406176 + L2 LINE L2 2643 3047 -225 381 238 0 0 chr20 37261831 37261911 -29406094 - L2 LINE L2 -3 3310 3231 1944 122 0 86 chr20 37261912 37262239 -29405766 + AluJb SINE Alu 1 299 -13 184 152 0 109 chr20 37262318 37262364 -29405641 + L2 LINE L2 3137 3177 -95 748 249 37 5 chr20 37262813 37263002 -29405003 + MIR SINE MIR 24 218 -44 2364 102 0 0 chr20 37263011 37263305 -29404700 + AluSq SINE Alu 1 294 -19 244 312 71 18 chr20 37263727 37263897 -29404108 + L2 LINE L2 2493 2671 -643 448 313 69 42 chr20 37263909 37263965 -29404040 - L2 LINE L2 -553 2761 2708 2256 83 0 33 chr20 37263965 37264267 -29403738 - AluSq SINE Alu -21 292 1 448 313 69 42 chr20 37264267 37264472 -29403533 - L2 LINE L2 -606 2708 2493 4106 130 29 24 chr20 37264477 37265052 -29402953 + MER50 LTR ERV1 7 587 -147 5145 75 38 0 chr20 37265052 37265718 -29402287 + LTR8 LTR ERV1 1 691 0 4106 130 29 24 chr20 37265718 37265844 -29402161 + MER50 LTR ERV1 587 711 -23 342 261 113 0 chr20 37266023 37266138 -29401867 - L2 LINE L2 -836 2478 2351 831 289 64 20 chr20 37266664 37267010 -29400995 + L2 LINE L2 2904 3264 -49 725 229 18 6 chr20 37267015 37267181 -29400824 - MLT1I LTR MaLR -12 397 230 305 219 16 0 chr20 37267385 37267449 -29400556 - MIR SINE MIR -136 126 62 1966 145 137 11 chr20 37267450 37267830 -29400175 + MSTA LTR MaLR 1 428 0 261 231 0 19 chr20 37267834 37267886 -29400119 + MIR SINE MIR 18 68 -194 578 103 77 17 chr20 37267907 37268024 -29399981 + L1MC4 LINE L1 7006 7129 -913 1860 200 145 17 chr20 37268028 37268558 -29399447 + L1MC4 LINE L1 7297 7894 -148 423 68 0 0 chr20 37268561 37268620 -29399385 + (TCTA)n Simple_repeat Simple_repeat 3 61 0 1317 96 11 0 chr20 37268623 37268811 -29399194 - MER4E LTR ERV1 -4 762 573 21 57 0 0 chr20 37268811 37268846 -29399159 + AT_rich Low_complexity Low_complexity 1 35 0 1828 136 84 75 chr20 37268922 37269349 -29398656 - MER4B LTR ERV1 -179 431 1 539 207 8 17 chr20 37269351 37269509 -29398496 + L1MC4 LINE L1 6241 6358 -1 2196 128 3 13 chr20 37269664 37269977 -29398028 + AluSx SINE Alu 1 310 -2 431 269 77 32 chr20 37270012 37270168 -29397837 + MIR SINE MIR 94 256 -6 605 218 6 32 chr20 37270168 37270324 -29397681 + L1MA10 LINE L1 6170 6321 -13 2236 123 3 3 chr20 37270571 37270879 -29397126 + AluSx SINE Alu 1 308 -4 1048 159 39 10 chr20 37270922 37271130 -29396875 + L1ME2 LINE L1 5847 6060 -104 604 156 125 0 chr20 37271151 37271279 -29396726 - LTR47A LTR ERVL -44 408 265 370 225 25 0 chr20 37271555 37271635 -29396370 + L1ME2 LINE L1 6068 6149 -15 2200 110 0 0 chr20 37271676 37271987 -29396018 + AluSx SINE Alu 1 311 0 348 197 54 84 chr20 37271998 37272064 -29395941 + L1MC4 LINE L1 7837 7903 -139 1398 194 44 27 chr20 37272064 37272358 -29395647 + AluJo SINE Alu 1 299 -13 348 197 54 84 chr20 37272358 37272494 -29395511 + L1MC4 LINE L1 7903 8033 -9 457 335 174 0 chr20 37272842 37272997 -29395008 - MER91A DNA MER1_type -7 189 8 593 314 21 0 chr20 37273726 37273914 -29394091 + MIR SINE MIR 52 243 -19 1704 244 71 16 chr20 37274361 37274799 -29393206 + L2 LINE L2 2262 2723 -591 719 180 167 0 chr20 37274799 37274949 -29393056 + AluJb SINE Alu 130 304 -8 1213 239 96 83 chr20 37274950 37275208 -29392797 + L2 LINE L2 2713 2966 -347 2361 90 0 3 chr20 37275208 37275508 -29392497 - AluSg SINE Alu -11 299 1 1213 239 96 83 chr20 37275508 37275688 -29392317 + L2 LINE L2 2966 3158 -155 1886 160 3 0 chr20 37275688 37275996 -29392009 - AluJb SINE Alu 0 309 1 1213 239 96 83 chr20 37275996 37276146 -29391859 + L2 LINE L2 3158 3305 -8 2296 169 65 18 chr20 37276149 37276805 -29391200 - MER21A LTR ERV1 -132 799 1 679 276 23 0 chr20 37276817 37277031 -29390974 + L1M4 LINE L1 4465 4683 -1463 261 186 0 6 chr20 37277034 37277093 -29390912 + AluSg/x SINE Alu 118 171 -131 435 179 11 0 chr20 37277102 37277197 -29390808 - L1MEc LINE L1 -4663 2459 2364 * 8132 135 20 47 chr20 37277186 37277795 -29390210 - L1MA4 LINE L1 -1 6299 5675 2757 42 0 0 chr20 37277795 37278106 -29389899 + AluY SINE Alu 1 311 0 8132 135 20 47 chr20 37278106 37278186 -29389819 - L1MA4 LINE L1 -625 5675 5594 2142 125 0 58 chr20 37278186 37278515 -29389490 - AluSg SINE Alu 0 310 1 8132 135 20 47 chr20 37278515 37279105 -29388900 - L1MA4 LINE L1 -706 5594 4990 4901 69 3 18 chr20 37279105 37279726 -29388279 - SVA Other Other 0 1386 775 8132 135 20 47 chr20 37279726 37280134 -29387871 - L1MA4 LINE L1 -1310 4990 4573 2314 113 3 0 chr20 37280134 37280435 -29387570 - AluSp SINE Alu -11 302 1 8132 135 20 47 chr20 37280435 37280661 -29387344 - L1MA4 LINE L1 -1727 4573 4342 1926 142 0 24 chr20 37280661 37280956 -29387049 - AluJb SINE Alu -4 308 21 8132 135 20 47 chr20 37280956 37282163 -29385842 - L1MA4 LINE L1 -1958 4342 3246 2457 165 11 9 chr20 37282162 37282333 -29385672 + L1 LINE L1 2873 3042 -3104 * 1948 181 0 10 chr20 37282333 37282642 -29385363 + AluJb SINE Alu 1 306 -6 2457 165 11 9 chr20 37282642 37283009 -29384996 + L1 LINE L1 3042 3412 -2734 1000 208 9 0 chr20 37283007 37283228 -29384777 - L1MA4 LINE L1 -3272 2874 2652 * 1020 122 32 154 chr20 37283240 37283461 -29384544 + MER70B LTR ERVL 279 476 0 4421 126 20 4 chr20 37283541 37284230 -29383775 + MER50 LTR ERV1 7 706 -28 450 177 14 113 chr20 37284236 37284338 -29383667 - L1MEc LINE L1 -6278 145 59 2195 121 0 0 chr20 37284338 37284635 -29383370 - AluSx SINE Alu -15 297 1 450 177 14 113 chr20 37284635 37284673 -29383332 - L1MEc LINE L1 -6364 59 19 1024 243 33 7 chr20 37284710 37285015 -29382990 + L1M4 LINE L1 4325 4637 -1509 564 115 90 8 chr20 37285015 37285137 -29382868 + L1MB7 LINE L1 6053 6184 0 2082 143 3 0 chr20 37285143 37285443 -29382562 + AluSx SINE Alu 1 301 -11 254 239 65 0 chr20 37285487 37285579 -29382426 - MER96 DNA MER1_type? -77 98 1 940 272 102 42 chr20 37285764 37286213 -29381792 + L2 LINE L2 2838 3313 0 190 320 10 99 chr20 37286208 37286520 -29381485 - L2 LINE L2 -76 3196 2913 * 390 151 0 0 chr20 37286532 37286605 -29381400 + (TG)n Simple_repeat Simple_repeat 2 74 0 2079 136 10 7 chr20 37286673 37286982 -29381023 + AluJb SINE Alu 1 310 -2 888 159 0 0 chr20 37287111 37287243 -29380762 - FLAM_C SINE Alu 0 133 2 372 118 0 35 chr20 37287290 37287375 -29380630 - MER113 DNA MER1_type? -376 145 64 932 244 137 16 chr20 37287863 37288228 -29379777 + LTR16C LTR ERVL 83 491 0 3754 136 47 0 chr20 37288441 37288938 -29379067 + MER41B LTR ERV1 2 533 -102 2053 130 20 3 chr20 37288938 37289238 -29378767 - AluSx SINE Alu -2 310 6 3754 136 47 0 chr20 37289238 37289338 -29378667 + MER41B LTR ERV1 533 627 -8 613 251 62 22 chr20 37289394 37289573 -29378432 + L2 LINE L2 2921 3106 -207 529 210 95 2 chr20 37289590 37289733 -29378272 - L1ME1 LINE L1 0 6334 6024 2102 94 106 44 chr20 37289761 37289968 -29378037 + MER41C LTR ERV1 1 241 -313 2461 77 3 7 chr20 37289968 37290278 -29377727 - AluSg SINE Alu -1 309 1 2102 94 106 44 chr20 37290278 37290430 -29377575 + MER41C LTR ERV1 241 382 -172 1750 94 0 0 chr20 37290436 37290660 -29377345 - AluSg/x SINE Alu -8 302 79 874 98 0 0 chr20 37290660 37290783 -29377222 + MER41A LTR ERV1 432 554 0 1548 179 13 88 chr20 37290784 37291068 -29376937 - L1ME1 LINE L1 -179 5985 5681 2219 97 0 4 chr20 37291068 37291372 -29376633 + AluSg SINE Alu 2 304 0 1548 179 13 88 chr20 37291372 37291414 -29376591 - L1ME1 LINE L1 -483 5681 5688 4080 93 22 0 chr20 37291414 37291952 -29376053 - MER41A LTR ERV1 0 554 5 1548 179 13 88 chr20 37291952 37292019 -29375986 - L1ME1 LINE L1 -475 5689 5619 222 284 157 29 chr20 37292063 37292165 -29375840 + L2 LINE L2 3157 3271 -1 3432 142 53 33 chr20 37292458 37293141 -29374864 + LTR8A LTR ERV1 1 691 0 258 219 179 41 chr20 37293190 37293313 -29374692 - MER115 DNA AcHobo -257 436 297 186 189 27 0 chr20 37293825 37293862 -29374143 + L3 LINE CR1 1514 1551 -26 555 316 54 30 chr20 37294293 37294793 -29373212 - L2 LINE L2 -45 3268 2527 2256 131 0 0 chr20 37294801 37295113 -29372892 + AluSx SINE Alu 1 312 0 255 250 69 95 chr20 37295287 37295403 -29372602 + MER5A DNA MER1_type 3 115 -74 401 228 13 0 chr20 37296130 37296209 -29371796 - MIR SINE MIR -114 148 69 246 331 31 55 chr20 37297107 37297234 -29370771 + MIR3 SINE MIR 37 160 -48 687 244 77 12 chr20 37297487 37297655 -29370350 + L3 LINE CR1 1388 1566 -11 2670 112 2 19 chr20 37297660 37298078 -29369927 - L1PA13 LINE L1 -7 6156 5746 1967 167 10 0 chr20 37298348 37298653 -29369352 - AluJb SINE Alu -4 308 1 867 106 0 38 chr20 37298753 37298775 -29369230 - AluSg/x SINE Alu -11 299 278 1262 148 30 4 chr20 37298775 37299011 -29368994 - L1MA3 LINE L1 0 6305 6064 867 106 0 38 chr20 37299011 37299120 -29368885 - AluSg/x SINE Alu -32 278 173 1672 140 0 7 chr20 37299120 37299406 -29368599 - L1MA3 LINE L1 -241 6064 5781 377 266 0 0 chr20 37299891 37299970 -29368035 + MER63 DNA MER1_type 673 751 -311 285 268 0 14 chr20 37299971 37300042 -29367963 + MER63 DNA MER1_type 977 1046 -14 2224 107 10 7 chr20 37300363 37300663 -29367342 - AluSx SINE Alu -11 301 1 275 302 0 0 chr20 37300704 37300779 -29367226 - MIR SINE MIR -63 145 79 187 297 16 16 chr20 37300795 37300859 -29367146 - MIR SINE MIR -1 261 198 791 223 121 19 chr20 37300861 37301117 -29366888 - LTR16A1 LTR ERVL -3 454 173 2405 96 7 0 chr20 37301171 37301206 -29366799 - AluSx SINE Alu 0 542 509 1091 81 5 32 chr20 37301206 37301391 -29366614 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2405 96 7 0 chr20 37301391 37301711 -29366294 - AluSx SINE Alu -33 509 1 706 204 29 0 chr20 37301776 37301913 -29366092 - MIR SINE MIR -62 200 60 2226 125 0 0 chr20 37302094 37302383 -29365622 + AluSx SINE Alu 1 289 -23 426 248 0 29 chr20 37302500 37302605 -29365400 + MIR SINE MIR 109 210 -52 223 309 9 9 chr20 37303004 37303114 -29364891 + (TG)n Simple_repeat Simple_repeat 1 110 0 2076 120 7 3 chr20 37304215 37304524 -29363481 - AluSq SINE Alu 0 310 1 2129 119 28 0 chr20 37305318 37305604 -29362401 - AluSx SINE Alu -12 300 7 352 282 164 64 chr20 37305616 37305946 -29362059 + L2 LINE L2 2894 3256 -16 274 218 30 89 chr20 37306239 37306340 -29361665 + MIR SINE MIR 53 141 -67 3292 87 12 37 chr20 37306603 37307088 -29360917 + MER1A DNA MER1_type 57 529 0 379 221 0 0 chr20 37307088 37307156 -29360849 - L2 LINE L2 -21 3292 3225 325 237 140 0 chr20 37307191 37307284 -29360721 - L2 LINE L2 0 3313 3208 268 315 11 22 chr20 37307387 37307479 -29360526 - MIR SINE MIR -152 110 20 2142 112 14 14 chr20 37307530 37307824 -29360181 - AluSx SINE Alu -18 294 1 2248 132 0 0 chr20 37308510 37308814 -29359191 - AluSx SINE Alu -8 304 1 536 245 167 31 chr20 37309103 37309295 -29358710 - MIR SINE MIR -29 233 16 1708 142 59 7 chr20 37309642 37309930 -29358075 + AluJb SINE Alu 1 303 -9 222 227 45 15 chr20 37310506 37310572 -29357433 + MIR SINE MIR 78 145 -63 202 230 135 81 chr20 37311219 37311367 -29356638 + L2 LINE L2 376 531 -2783 1314 139 72 0 chr20 37311440 37311649 -29356356 + AluSg/x SINE Alu 87 310 0 2557 150 28 6 chr20 37311659 37312125 -29355880 - MER31A LTR ERV1 -6 479 4 224 0 65 0 chr20 37312148 37312179 -29355826 + (TAAAAA)n Simple_repeat Simple_repeat 2 34 0 2283 117 0 28 chr20 37312221 37312538 -29355467 - AluSx SINE Alu -4 308 1 203 227 30 0 chr20 37312633 37312699 -29355306 + (TA)n Simple_repeat Simple_repeat 1 68 0 347 308 19 6 chr20 37312702 37312861 -29355144 - L1ME3A LINE L1 -230 5940 5780 882 209 94 17 chr20 37312880 37313114 -29354891 + L1ME LINE L1 5522 5773 -389 682 211 58 0 chr20 37314376 37314547 -29353458 + L1M4 LINE L1 16 196 -6346 850 196 13 13 chr20 37314548 37314706 -29353299 - AluJb SINE Alu -12 300 143 673 205 12 53 chr20 37314748 37314919 -29353086 + MER21B LTR ERV1 1 164 -699 2131 269 37 32 chr20 37314930 37315900 -29352105 + L1M4 LINE L1 1461 2555 -4270 2320 116 3 0 chr20 37315900 37316202 -29351803 + AluSq SINE Alu 1 303 -10 2131 269 37 32 chr20 37316202 37316325 -29351680 + L1M4 LINE L1 2555 2676 -4149 3076 243 15 14 chr20 37316329 37317207 -29350798 + L1M4 LINE L1 2776 3654 -2990 3720 162 62 7 chr20 37317209 37317905 -29350100 + L1MB7 LINE L1 5443 6176 -8 2275 116 3 3 chr20 37318004 37318314 -29349691 - AluSx SINE Alu -2 310 1 308 238 197 7 chr20 37318322 37318469 -29349536 - MER104 DNA Tc2 -2 178 4 1548 149 24 98 chr20 37318688 37319024 -29348981 + AluYb8 SINE Alu 1 311 -7 2093 138 0 10 chr20 37319438 37319742 -29348263 - AluJb SINE Alu -11 301 1 467 241 17 17 chr20 37320991 37321107 -29346898 + MIR SINE MIR 31 146 -62 453 265 0 10 chr20 37321332 37321434 -29346571 + MIR SINE MIR 83 183 -79 280 200 17 17 chr20 37321506 37321566 -29346439 + MIR SINE MIR 184 243 -19 628 282 110 31 chr20 37321846 37322073 -29345932 - MIR SINE MIR -5 257 13 604 325 60 5 chr20 37322141 37322341 -29345664 - MIR SINE MIR -32 230 20 182 182 0 68 chr20 37322353 37322397 -29345608 - L2 LINE L2 -401 2913 2873 189 385 103 0 chr20 37322479 37322635 -29345370 - L2 LINE L2 -556 2758 2587 2348 102 0 13 chr20 37323312 37323627 -29344378 - AluSx SINE Alu -1 311 1 550 282 8 0 chr20 37323670 37323794 -29344211 - FLAM_A SINE Alu -8 125 1 714 239 42 46 chr20 37323954 37324018 -29343987 - L1ME3 LINE L1 -2 6160 6097 2129 100 13 39 chr20 37324018 37324327 -29343678 - AluSx SINE Alu -11 301 1 714 239 42 46 chr20 37324327 37324525 -29343480 - L1ME3 LINE L1 -65 6097 5899 1868 171 14 0 chr20 37324760 37325046 -29342959 + AluJb SINE Alu 1 290 -22 807 228 246 21 chr20 37325053 37325391 -29342614 - MLT1K LTR MaLR -10 578 165 1644 116 86 73 chr20 37325551 37325853 -29342152 + AluJo SINE Alu 1 306 -6 2495 177 18 46 chr20 37326150 37326646 -29341359 + MER66B LTR ERV1 5 486 0 217 256 26 90 chr20 37326857 37326935 -29341070 - L2 LINE L2 -74 3198 3126 189 74 0 0 chr20 37327613 37327640 -29340365 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 434 314 92 28 chr20 37327640 37327916 -29340089 - L2 LINE L2 -10 3262 2966 235 314 182 25 chr20 37328298 37328419 -29339586 + MIR3 SINE MIR 6 145 -63 294 170 0 0 chr20 37328472 37328525 -29339480 + MER74B LTR ERVL 1 53 -569 196 40 0 0 chr20 37328540 37328565 -29339440 - MIR SINE MIR -225 37 13 1834 182 0 0 chr20 37328584 37328870 -29339135 + AluJb SINE Alu 1 286 -26 306 0 0 0 chr20 37328870 37328904 -29339101 + (CAAAT)n Simple_repeat Simple_repeat 2 35 0 944 200 132 11 chr20 37328918 37329183 -29338822 + MER74B LTR ERVL 259 555 -67 257 268 92 37 chr20 37329886 37330050 -29337955 + LTR33A LTR ERVL 351 523 0 244 198 142 47 chr20 37330109 37330215 -29337790 + L3 LINE CR1 975 1090 -487 3061 102 12 19 chr20 37330284 37330715 -29337290 + MSTC LTR MaLR 1 428 0 313 277 12 0 chr20 37330731 37330814 -29337191 + L2 LINE L2 2592 2675 -639 997 118 0 9 chr20 37332230 37332456 -29335549 + (TTCC)n Simple_repeat Simple_repeat 1 223 0 1917 154 35 0 chr20 37332456 37332742 -29335263 - AluJo SINE Alu -16 296 1 431 313 0 0 chr20 37332999 37333111 -29334894 - L2 LINE L2 -1 3312 3201 385 239 56 169 chr20 37333108 37333464 -29334541 + L2 LINE L2 2920 3235 -37 * 204 40 0 0 chr20 37333472 37333497 -29334508 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 502 310 19 46 chr20 37333732 37333830 -29334175 + MIR SINE MIR 53 152 -110 1858 171 49 25 chr20 37333830 37334157 -29333848 + MER1B DNA MER1_type 3 337 0 502 310 19 46 chr20 37334157 37334274 -29333731 + MIR SINE MIR 152 262 0 1594 159 12 0 chr20 37334759 37335004 -29333001 + AluJo SINE Alu 2 249 -63 469 268 76 13 chr20 37335178 37335236 -29332769 - L1MC4a LINE L1 -1911 5897 5844 2042 130 0 3 chr20 37335236 37335541 -29332464 - AluSx SINE Alu 0 304 1 469 268 76 13 chr20 37335541 37335637 -29332368 - L1MC4a LINE L1 -1964 5844 5731 287 298 12 0 chr20 37335646 37335730 -29332275 - L1MC4a LINE L1 -2154 5654 5570 2086 142 0 0 chr20 37335814 37336109 -29331896 - AluSx SINE Alu -17 295 1 260 167 19 19 chr20 37336297 37336351 -29331654 + LTR16A1 LTR ERVL 259 312 -145 1064 216 94 95 chr20 37336358 37336495 -29331510 + MLT1F1 LTR MaLR 1 137 -430 2388 81 14 0 chr20 37336495 37336791 -29331214 + AluSq SINE Alu 1 300 -13 1064 216 94 95 chr20 37336791 37336878 -29331127 + MLT1F1 LTR MaLR 137 223 -344 707 57 0 19 chr20 37336878 37336984 -29331021 + (ATATG)n Simple_repeat Simple_repeat 3 106 0 1064 216 94 95 chr20 37336984 37337101 -29330904 + MLT1F1 LTR MaLR 223 339 -228 2056 142 0 0 chr20 37337101 37337389 -29330616 - AluSx SINE Alu -24 288 1 1064 216 94 95 chr20 37337389 37337581 -29330424 + MLT1F1 LTR MaLR 339 567 0 374 197 59 92 chr20 37337581 37337652 -29330353 + LTR16A1 LTR ERVL 321 386 -71 2254 76 28 14 chr20 37337652 37337943 -29330062 - AluSq SINE Alu -18 295 1 374 197 59 92 chr20 37337943 37338013 -29329992 + LTR16A1 LTR ERVL 386 457 0 1898 154 171 11 chr20 37338696 37339065 -29328940 - MSTA LTR MaLR 0 428 1 436 262 227 0 chr20 37339237 37339378 -29328627 - MIR SINE MIR -29 233 61 838 231 187 3 chr20 37339451 37339772 -29328233 + LTR16C LTR ERVL 103 482 -9 1982 99 67 18 chr20 37339949 37340232 -29327773 - AluSx SINE Alu -15 297 1 409 318 47 27 chr20 37340714 37340862 -29327143 + L2 LINE L2 3122 3272 0 623 226 48 43 chr20 37340926 37341134 -29326871 - MLT1K LTR MaLR -13 575 367 247 236 0 56 chr20 37341203 37341275 -29326730 + MIR3 SINE MIR 110 177 -31 526 284 8 8 chr20 37341289 37341416 -29326589 - MIR3 SINE MIR -38 170 44 506 250 91 11 chr20 37341594 37341770 -29326235 + MIR SINE MIR 39 228 -34 1727 191 0 0 chr20 37341857 37342170 -29325835 + AluJb SINE Alu 1 313 0 3012 113 7 5 chr20 37342228 37342654 -29325351 + MSTA LTR MaLR 2 428 0 293 291 17 60 chr20 37342934 37343051 -29324954 - MIR3 SINE MIR -15 193 82 194 175 250 50 chr20 37343189 37343269 -29324736 + MIR SINE MIR 52 147 -61 249 125 0 0 chr20 37343424 37343472 -29324533 + MER113 DNA MER1_type? 61 108 -413 225 0 0 0 chr20 37343520 37343545 -29324460 + (TA)n Simple_repeat Simple_repeat 2 26 0 2273 118 0 0 chr20 37343545 37343849 -29324156 - AluSx SINE Alu -8 304 1 212 389 0 0 chr20 37344016 37344106 -29323899 - MIR SINE MIR -81 127 38 294 301 155 35 chr20 37344148 37344374 -29323631 + L2 LINE L2 2909 3161 -111 239 302 47 0 chr20 37345108 37345194 -29322811 - MIR SINE MIR -53 209 120 1253 270 146 11 chr20 37345199 37345694 -29322311 - L2 LINE L2 -4 3309 2742 836 119 10 98 chr20 37345706 37345733 -29322272 + MER53 DNA DNA 11 39 -150 1654 203 39 0 chr20 37345733 37346019 -29321986 + AluJb SINE Alu 1 297 -15 836 119 10 98 chr20 37346019 37346184 -29321821 + MER53 DNA DNA 39 186 -3 1600 249 39 25 chr20 37346189 37346631 -29321374 - L2 LINE L2 -565 2749 2302 689 139 148 66 chr20 37346645 37346894 -29321111 + MLT1C LTR MaLR 4 270 -173 205 257 27 27 chr20 37346916 37346990 -29321015 - L2 LINE L2 -1032 2282 2209 25 0 0 0 chr20 37346990 37347015 -29320990 + AT_rich Low_complexity Low_complexity 1 25 0 2214 110 3 3 chr20 37347015 37347306 -29320699 - AluSx SINE Alu -21 291 1 1294 258 61 3 chr20 37347312 37347680 -29320325 - L2 LINE L2 -1099 2215 1823 1700 167 4 0 chr20 37347680 37347943 -29320062 + AluJb SINE Alu 42 305 -7 298 266 13 13 chr20 37347950 37348029 -29319976 + CT-rich Low_complexity Low_complexity 6 84 0 481 284 189 41 chr20 37348304 37348723 -29319282 - L2 LINE L2 0 3313 2833 797 154 8 8 chr20 37348726 37348849 -29319156 + FLAM_C SINE Alu 2 124 -19 674 316 107 42 chr20 37348858 37349005 -29319000 - L2 LINE L2 -470 2844 2708 2767 113 16 0 chr20 37349005 37349430 -29318575 - L1MA5A LINE L1 -2 6295 5864 674 316 107 42 chr20 37349430 37349826 -29318179 - L2 LINE L2 -606 2708 2266 308 271 102 57 chr20 37349935 37350179 -29317826 - L2 LINE L2 -205 3067 2813 1207 172 48 31 chr20 37350296 37350523 -29317482 - AluJb SINE Alu -81 231 1 207 0 0 0 chr20 37350554 37350577 -29317428 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2258 92 28 0 chr20 37350579 37350861 -29317144 - AluSg SINE Alu -20 290 1 249 295 66 59 chr20 37350911 37351068 -29316937 + MIR SINE MIR 6 167 -63 201 241 0 0 chr20 37351070 37351124 -29316881 + CT-rich Low_complexity Low_complexity 3 56 0 444 307 186 35 chr20 37351124 37351548 -29316457 - L2 LINE L2 -1 3312 2825 293 267 118 41 chr20 37351851 37352046 -29315959 + MLT1H LTR MaLR 132 341 -208 571 291 86 22 chr20 37352370 37352648 -29315357 + L2 LINE L2 2715 3004 -268 691 249 111 0 chr20 37352682 37352871 -29315134 - MIR SINE MIR -8 254 45 747 302 0 5 chr20 37353008 37353197 -29314808 - MIR SINE MIR -33 229 42 290 297 9 9 chr20 37353768 37353879 -29314126 + CT-rich Low_complexity Low_complexity 2 112 0 243 330 32 0 chr20 37353940 37354034 -29313971 + MIR SINE MIR 79 175 -87 223 309 32 11 chr20 37354330 37354424 -29313581 + L3b LINE CR1 1300 1395 -188 250 349 128 0 chr20 37354462 37354571 -29313434 + L2 LINE L2 3148 3270 -2 195 237 0 0 chr20 37355047 37355085 -29312920 + MIR SINE MIR 31 68 -140 1478 289 34 2 chr20 37355158 37355566 -29312439 - LTR16A LTR ERVL -5 445 25 187 299 214 19 chr20 37355602 37355756 -29312249 - MIR SINE MIR -65 197 14 239 329 85 0 chr20 37355818 37355900 -29312105 + MIR3 SINE MIR 88 176 -32 227 208 42 0 chr20 37356053 37356101 -29311904 + MIR3 SINE MIR 152 201 -7 288 339 92 49 chr20 37357187 37357556 -29310449 + L2 LINE L2 2437 2821 -493 337 277 34 47 chr20 37357609 37357757 -29310248 + L2 LINE L2 2914 3059 -213 616 258 126 20 chr20 37357850 37358048 -29309957 + MIR SINE MIR 38 256 -6 1307 231 82 41 chr20 37358102 37358539 -29309466 - LTR16A1 LTR ERVL 0 457 3 499 331 59 66 chr20 37358646 37358951 -29309054 - L2 LINE L2 0 3272 2970 194 271 250 42 chr20 37359484 37359628 -29308377 + MIR3 SINE MIR 23 196 -12 343 327 25 19 chr20 37360114 37360276 -29307729 - MIR SINE MIR -98 164 2 546 240 200 20 chr20 37360363 37360563 -29307442 + MIR SINE MIR 20 255 -7 796 200 0 89 chr20 37361189 37361414 -29306591 + L2 LINE L2 3089 3293 -20 282 256 143 23 chr20 37361632 37361765 -29306240 + MIR SINE MIR 74 222 -40 342 0 0 0 chr20 37362041 37362079 -29305926 + (TG)n Simple_repeat Simple_repeat 1 38 0 442 225 33 86 chr20 37362544 37362695 -29305310 + MIR3 SINE MIR 50 192 -16 340 238 0 0 chr20 37362933 37362996 -29305009 - MIR SINE MIR -119 143 81 208 278 204 9 chr20 37363257 37363365 -29304640 - MIR SINE MIR -61 147 19 183 277 0 0 chr20 37363657 37363704 -29304301 - MIR3 SINE MIR -38 170 124 228 353 61 0 chr20 37363777 37363876 -29304129 - MIR SINE MIR -65 143 47 671 273 31 5 chr20 37363883 37364077 -29303928 + MLT1A2 LTR MaLR 171 369 -5 576 118 0 0 chr20 37364086 37364171 -29303834 + L1MD1 LINE L1 6090 6174 -68 386 236 0 22 chr20 37364172 37364261 -29303744 + MIR SINE MIR 58 144 -64 431 248 33 84 chr20 37364287 37364561 -29303444 + L1M4 LINE L1 2927 3186 -2960 615 306 115 54 chr20 37364595 37364909 -29303096 - L2 LINE L2 -2 3270 2938 589 289 14 0 chr20 37364977 37365119 -29302886 - MIR SINE MIR -81 181 38 237 251 47 94 chr20 37366381 37366552 -29301453 + L2 LINE L2 2902 3064 -208 2487 62 0 0 chr20 37366556 37366882 -29301123 - AluY SINE Alu 0 326 1 1871 168 17 0 chr20 37366890 37367187 -29300818 - AluJb SINE Alu -10 302 1 452 257 105 35 chr20 37367226 37367397 -29300608 + MIR SINE MIR 1 183 -79 435 331 12 24 chr20 37367580 37367749 -29300256 + MIR3 SINE MIR 17 183 -25 367 241 36 36 chr20 37367848 37367960 -29300045 + MIR SINE MIR 80 191 -71 500 272 27 54 chr20 37367977 37368161 -29299844 - L2 LINE L2 -18 3295 3117 1443 174 17 55 chr20 37368164 37368487 -29299518 + AluJb SINE Alu 1 312 0 219 222 22 0 chr20 37368517 37368562 -29299443 - L2 LINE L2 -217 3055 3010 632 230 62 11 chr20 37368562 37368740 -29299265 - MLT1F1 LTR MaLR 0 567 381 593 301 52 48 chr20 37368783 37369092 -29298913 - MLT1F1 LTR MaLR -285 310 1 288 243 99 36 chr20 37369092 37369203 -29298802 - L2 LINE L2 -258 3014 2897 * 768 235 88 137 chr20 37369180 37370056 -29297949 - L2 LINE L2 -37 3276 2442 234 274 0 0 chr20 37370077 37370128 -29297877 - MIR SINE MIR -89 119 69 809 243 60 48 chr20 37370649 37370900 -29297105 + MIR SINE MIR 2 255 -7 662 130 0 8 chr20 37371259 37371382 -29296623 + (TCCA)n Simple_repeat Simple_repeat 3 124 0 452 171 9 0 chr20 37371434 37371545 -29296460 + (TCCA)n Simple_repeat Simple_repeat 4 115 0 213 366 56 56 chr20 37371647 37371808 -29296197 - L2 LINE L2 0 3272 3112 204 330 21 21 chr20 37372101 37372195 -29295810 - L3 LINE CR1 -65 1512 1419 674 272 27 16 chr20 37372305 37372489 -29295516 + MIR SINE MIR 16 201 -61 593 210 67 76 chr20 37372751 37372783 -29295222 - LTR33A LTR ERVL -170 353 322 1895 127 28 3 chr20 37372783 37373067 -29294938 - AluJb SINE Alu -21 291 1 593 210 67 76 chr20 37373067 37373258 -29294747 - LTR33A LTR ERVL -201 322 132 281 276 0 0 chr20 37373515 37373573 -29294432 + MIR SINE MIR 119 176 -86 336 291 0 0 chr20 37373610 37373689 -29294316 - L2 LINE L2 -47 3225 3147 368 172 0 0 chr20 37373699 37373763 -29294242 + MIR SINE MIR 187 250 -12 284 219 164 0 chr20 37373769 37373842 -29294163 - MER103 DNA DNA -79 87 3 267 197 66 53 chr20 37374154 37374230 -29293775 - L2 LINE L2 0 3272 3196 304 294 98 10 chr20 37374278 37374380 -29293625 - L2 LINE L2 -186 3086 2976 519 293 26 16 chr20 37374519 37374710 -29293295 + MIR SINE MIR 20 212 -50 372 232 0 23 chr20 37375201 37375298 -29292707 + MIR SINE MIR 63 157 -51 938 241 38 44 chr20 37375417 37375754 -29292251 - MLT1I LTR MaLR -23 386 82 1972 114 0 4 chr20 37375839 37376101 -29291904 + AluSx SINE Alu 21 281 -31 2121 151 0 0 chr20 37376108 37376407 -29291598 + AluSx SINE Alu 5 303 -9 1639 107 5 0 chr20 37376501 37376716 -29291289 - AluSx SINE Alu -77 235 20 508 258 15 38 chr20 37376896 37377028 -29290977 - L2 LINE L2 0 3272 3144 525 198 12 125 chr20 37377349 37377405 -29290600 + L1ME1 LINE L1 6004 6065 -269 2219 114 0 0 chr20 37377405 37377694 -29290311 + AluSx SINE Alu 1 289 -23 525 198 12 125 chr20 37377694 37377831 -29290174 + L1ME1 LINE L1 6065 6333 -1 250 233 6 11 chr20 37377872 37377960 -29290045 - MIR SINE MIR -86 122 36 366 86 0 26 chr20 37378224 37378313 -29289692 - Alu SINE Alu -1 300 245 420 295 35 9 chr20 37378518 37378674 -29289331 - MIR SINE MIR -32 176 15 507 311 75 95 chr20 37379259 37379564 -29288441 - L2 LINE L2 -1 3271 2973 772 238 122 28 chr20 37379610 37379824 -29288181 + MIR SINE MIR 14 247 -15 524 251 99 35 chr20 37380027 37380198 -29287807 - MIR SINE MIR -79 183 2 638 244 87 6 chr20 37380472 37380644 -29287361 + MIR SINE MIR 77 262 0 239 247 24 47 chr20 37380741 37380826 -29287179 + MIR SINE MIR 61 143 -65 244 240 60 107 chr20 37381428 37381578 -29286427 + MIR SINE MIR 8 150 -112 298 249 140 0 chr20 37381593 37381716 -29286289 + L1ME1 LINE L1 5560 5714 -470 * 971 168 0 0 chr20 37381710 37381877 -29286128 - AluSg/x SINE Alu -9 303 137 1471 244 14 0 chr20 37381877 37382230 -29285775 + L1ME1 LINE L1 5697 6054 -112 436 154 0 0 chr20 37382230 37382308 -29285697 - FLAM_C SINE Alu -4 139 62 815 144 0 0 chr20 37382308 37382433 -29285572 - AluSg/x SINE Alu -54 256 132 349 200 25 0 chr20 37382484 37382564 -29285441 + L1MB7 LINE L1 6103 6184 0 2317 114 16 24 chr20 37382619 37382995 -29285010 - THE1C LTR MaLR -2 373 1 10741 109 22 30 chr20 37383024 37384616 -29283389 - THE1C-int LTR MaLR 0 1580 1 2085 133 27 29 chr20 37384616 37384992 -29283013 - THE1C LTR MaLR 0 375 1 1486 182 7 11 chr20 37384992 37385272 -29282733 - AluJb SINE Alu -33 279 1 707 238 70 48 chr20 37385293 37385566 -29282439 - L1ME3 LINE L1 0 6162 5884 475 320 89 54 chr20 37385582 37386138 -29281867 + L2 LINE L2 2690 3272 0 1945 147 3 19 chr20 37386254 37386568 -29281437 + AluSq SINE Alu 1 309 -4 2383 223 51 19 chr20 37386716 37387303 -29280702 - L1ME3 LINE L1 0 6162 5557 259 217 14 145 chr20 37387887 37387940 -29280065 + L1ME4a LINE L1 5696 5754 -367 2343 97 0 0 chr20 37387940 37388249 -29279756 + AluSx SINE Alu 3 311 -1 259 217 14 145 chr20 37388249 37388333 -29279672 + L1ME4a LINE L1 5754 5815 -306 2347 211 24 6 chr20 37388337 37388789 -29279216 + L1MD3 LINE L1 7481 7944 -51 1969 118 6 13 chr20 37388789 37389103 -29278902 - AluSq SINE Alu -1 312 1 2347 211 24 6 chr20 37389103 37389148 -29278857 + L1MD3 LINE L1 7944 7987 -8 2134 212 41 0 chr20 37389170 37389632 -29278373 - Charlie4a DNA MER1_type 0 508 28 236 267 35 43 chr20 37389673 37389789 -29278216 + L1ME4a LINE L1 5835 5949 -172 343 281 125 0 chr20 37389806 37389902 -29278103 - L2 LINE L2 -4 3268 3161 2086 125 0 0 chr20 37389950 37390254 -29277751 - AluSx SINE Alu -1 311 8 850 312 56 31 chr20 37390344 37390735 -29277270 - L3 LINE CR1 -195 1382 982 5876 156 53 101 chr20 37390746 37390786 -29277219 - L1MB8 LINE L1 0 6178 6138 2093 205 29 50 chr20 37390786 37391302 -29276703 - MLT1D LTR MaLR 0 505 1 5876 156 53 101 chr20 37391302 37391764 -29276241 - L1MB8 LINE L1 -40 6138 5655 2292 109 0 0 chr20 37391764 37392077 -29275928 - AluSq SINE Alu 0 313 1 5876 156 53 101 chr20 37392077 37392492 -29275513 - L1MB8 LINE L1 -523 5655 5221 4251 92 4 0 chr20 37392492 37393044 -29274961 - MER41A LTR ERV1 0 554 1 5876 156 53 101 chr20 37393044 37393112 -29274893 - L1MB8 LINE L1 -957 5221 5151 1898 133 19 7 chr20 37393112 37393420 -29274585 - AluSx SINE Alu 0 312 1 5876 156 53 101 chr20 37393420 37393626 -29274379 - L1MB8 LINE L1 -1027 5151 4937 2284 92 75 26 chr20 37393626 37393973 -29274032 - THE1B LTR MaLR 0 364 1 5876 156 53 101 chr20 37393973 37394654 -29273351 - L1MB8 LINE L1 -1241 4937 4225 777 120 60 0 chr20 37394654 37394771 -29273234 - AluJo SINE Alu -178 134 11 5876 156 53 101 chr20 37394771 37395090 -29272915 - L1MB8 LINE L1 -1953 4225 4024 1875 140 3 10 chr20 37395090 37395382 -29272623 - AluSx SINE Alu -22 290 1 5876 156 53 101 chr20 37395382 37395719 -29272286 - L1MB8 LINE L1 -2154 4024 3672 227 314 68 51 chr20 37395868 37395986 -29272019 + MIR SINE MIR 26 145 -63 346 186 144 0 chr20 37396208 37396301 -29271704 - MER5A DNA MER1_type -77 112 4 22 35 0 0 chr20 37396385 37396414 -29271591 + AT_rich Low_complexity Low_complexity 1 29 0 1053 152 0 12 chr20 37396509 37396680 -29271325 - AluSg/x SINE Alu -21 291 123 2253 86 0 0 chr20 37396903 37397193 -29270812 - AluSc SINE Alu -19 290 1 254 268 42 0 chr20 37397679 37397750 -29270255 + MIR SINE MIR 99 172 -90 2099 117 3 0 chr20 37397782 37398082 -29269923 + AluSx SINE Alu 1 301 -11 401 273 136 57 chr20 37398104 37398280 -29269725 + MIR SINE MIR 61 250 -12 201 213 0 0 chr20 37398379 37398426 -29269579 + CT-rich Low_complexity Low_complexity 3 49 0 238 163 23 0 chr20 37398860 37398903 -29269102 + MIR SINE MIR 81 124 -138 498 251 58 139 chr20 37399922 37400217 -29267788 + L2 LINE L2 2992 3262 -10 318 233 23 174 chr20 37400259 37400431 -29267574 + MIR SINE MIR 117 262 0 233 255 0 0 chr20 37400537 37400588 -29267417 - MIR SINE MIR -84 124 74 506 293 70 6 chr20 37400622 37400779 -29267226 + MIR SINE MIR 82 248 -14 198 293 136 68 chr20 37400876 37401200 -29266805 - L2 LINE L2 -8 3264 2919 269 269 43 43 chr20 37401236 37401329 -29266676 + L2 LINE L2 2934 3026 -246 706 213 131 15 chr20 37401472 37401836 -29266169 + LTR33A LTR ERVL 74 523 0 2154 109 23 0 chr20 37402055 37402358 -29265647 + AluSg SINE Alu 1 310 0 360 265 0 83 chr20 37402899 37403031 -29264974 - LTR16C LTR ERVL 0 491 371 785 293 19 60 chr20 37403467 37403676 -29264329 - L2 LINE L2 -1 3312 3119 2234 95 40 53 chr20 37403676 37404013 -29263992 + THE1C LTR MaLR 1 334 -41 2136 117 0 0 chr20 37404013 37404313 -29263692 - AluSg SINE Alu -10 300 1 2234 95 40 53 chr20 37404313 37404355 -29263650 + THE1C LTR MaLR 334 375 0 785 293 19 60 chr20 37404355 37404459 -29263546 - L2 LINE L2 -194 3119 3012 415 93 0 0 chr20 37406326 37406380 -29261625 + AluJ/FRAM SINE Alu 226 279 -33 396 0 0 0 chr20 37406380 37406424 -29261581 + (GA)n Simple_repeat Simple_repeat 1 44 0 1714 199 28 58 chr20 37406432 37406863 -29261142 + MLT1C LTR MaLR 43 460 -7 788 246 65 58 chr20 37407015 37407292 -29260713 + L2 LINE L2 2994 3272 0 392 308 23 8 chr20 37407937 37408067 -29259938 - MIR3 SINE MIR -67 141 10 2415 77 3 0 chr20 37408086 37408398 -29259607 + AluSq SINE Alu 1 313 0 285 303 35 35 chr20 37408448 37408590 -29259415 - L2 LINE L2 -181 3091 2950 1863 154 3 19 chr20 37408668 37408986 -29259019 - AluSq SINE Alu 0 313 1 433 277 63 13 chr20 37409058 37409175 -29258830 + MLT1L LTR MaLR 150 279 -336 1386 192 23 19 chr20 37409175 37409483 -29258522 - AluJb SINE Alu -3 309 1 433 277 63 13 chr20 37409483 37409524 -29258481 + MLT1L LTR MaLR 279 316 -299 314 317 150 22 chr20 37409591 37409771 -29258234 + MLT1L LTR MaLR 411 613 -2 635 98 11 11 chr20 37409794 37409886 -29258119 - MLT1A1 LTR MaLR -272 93 2 478 202 209 0 chr20 37409903 37410032 -29257973 + MIR SINE MIR 38 193 -69 2001 120 0 3 chr20 37410082 37410374 -29257631 + AluSg1 SINE Alu 1 291 -18 213 65 0 0 chr20 37410374 37410405 -29257600 + (TTAA)n Simple_repeat Simple_repeat 2 32 0 2025 94 24 7 chr20 37411237 37411525 -29256480 - AluSq SINE Alu -15 298 6 1409 247 89 43 chr20 37411554 37411925 -29256080 - LTR16C LTR ERVL -2 489 91 2314 103 0 0 chr20 37411925 37412237 -29255768 + AluSx SINE Alu 1 312 0 1409 247 89 43 chr20 37412237 37412327 -29255678 - LTR16C LTR ERVL -400 91 7 1955 114 35 0 chr20 37412411 37412700 -29255305 - AluSx SINE Alu -13 299 1 1915 118 24 0 chr20 37412700 37412989 -29255016 - AluSx SINE Alu -16 296 1 23 0 0 0 chr20 37413110 37413133 -29254872 + AT_rich Low_complexity Low_complexity 1 23 0 1623 171 0 7 chr20 37413341 37413648 -29254357 - AluJb SINE Alu 0 305 1 329 241 36 18 chr20 37413718 37413830 -29254175 - L1ME4a LINE L1 -21 6100 5987 713 120 154 8 chr20 37413849 37413966 -29254039 - AluJo SINE Alu -177 135 2 266 203 0 25 chr20 37414064 37414143 -29253862 + GA-rich Low_complexity Low_complexity 1 77 0 921 139 46 0 chr20 37414810 37414961 -29253044 - AluJb SINE Alu -26 286 129 470 265 26 0 chr20 37415147 37415264 -29252741 + MER103 DNA DNA 3 122 -44 888 192 124 21 chr20 37415474 37415667 -29252338 - MLT1F LTR MaLR -9 533 321 * 2290 189 102 38 chr20 37415655 37416153 -29251852 + MLT1F LTR MaLR 13 542 0 1112 137 112 0 chr20 37416507 37416704 -29251301 - AluJb SINE Alu -12 300 82 653 204 50 45 chr20 37416876 37417096 -29250909 - L1MC5 LINE L1 -76 7885 7665 246 269 148 19 chr20 37417336 37417444 -29250561 + MIR SINE MIR 37 158 -104 1566 182 0 20 chr20 37418071 37418368 -29249637 - AluJo SINE Alu -21 291 1 682 281 69 39 chr20 37418448 37418754 -29249251 - L2 LINE L2 0 3313 2999 729 134 116 17 chr20 37418860 37419032 -29248973 - MER53 DNA DNA 0 189 1 313 322 33 8 chr20 37419111 37419232 -29248773 + L2 LINE L2 2924 3047 -266 1878 119 29 23 chr20 37419423 37419733 -29248272 - AluJo SINE Alu 0 312 1 526 282 31 0 chr20 37419766 37419929 -29248076 - MIR SINE MIR -21 241 74 194 328 0 0 chr20 37419906 37419964 -29248041 + MIR SINE MIR 116 173 -89 * 481 252 37 0 chr20 37419973 37420080 -29247925 + L2 LINE L2 3190 3300 -13 207 0 0 0 chr20 37420080 37420103 -29247902 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 329 198 37 160 chr20 37420104 37420206 -29247799 - MIR SINE MIR -64 144 31 579 222 4 122 chr20 37420206 37420238 -29247767 + MER63A DNA MER1_type 5 39 -1649 1584 157 70 0 chr20 37420238 37420355 -29247650 + AluJb SINE Alu 1 108 -204 258 32 0 0 chr20 37420355 37420386 -29247619 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1584 157 70 0 chr20 37420386 37420555 -29247450 + AluJb SINE Alu 108 307 -5 579 222 4 122 chr20 37420555 37420752 -29247253 + MER63A DNA MER1_type 39 207 -3 329 198 37 160 chr20 37420752 37420812 -29247193 - MIR SINE MIR -177 31 1 2162 91 3 3 chr20 37420842 37421139 -29246866 - AluSc SINE Alu -12 297 1 225 246 0 141 chr20 37421216 37421305 -29246700 + L2 LINE L2 2691 2754 -560 2089 102 34 3 chr20 37421305 37421598 -29246407 - AluSx SINE Alu -10 302 1 225 246 0 141 chr20 37421598 37421650 -29246355 + L2 LINE L2 2754 2812 -502 * 542 278 88 42 chr20 37421644 37421928 -29246077 - L2 LINE L2 -21 3292 2996 36 23 0 0 chr20 37422060 37422103 -29245902 + AT_rich Low_complexity Low_complexity 1 43 0 207 287 26 61 chr20 37422267 37422382 -29245623 - MIR3 SINE MIR -42 166 56 * 286 246 90 67 chr20 37422297 37422395 -29245610 + MIR3 SINE MIR 10 113 -95 1214 137 164 55 chr20 37422395 37422687 -29245318 - MER33 DNA MER1_type 0 324 1 286 246 90 67 chr20 37422687 37422722 -29245283 + MIR3 SINE MIR 113 146 -62 473 309 25 25 chr20 37423485 37423647 -29244358 + MIR SINE MIR 47 208 -54 293 258 62 41 chr20 37423769 37423866 -29244139 - MIR SINE MIR -76 132 34 832 160 24 173 chr20 37423925 37424178 -29243827 + MER33 DNA MER1_type 1 180 -2405 1525 181 50 0 chr20 37424178 37424460 -29243545 - AluJo SINE Alu -10 302 7 832 160 24 173 chr20 37424460 37424587 -29243418 + MER33 DNA MER1_type 180 324 0 815 250 52 16 chr20 37424587 37424839 -29243166 + MIR SINE MIR 2 262 0 928 271 77 58 chr20 37425068 37425267 -29242738 - L2 LINE L2 0 3313 3119 1120 152 28 121 chr20 37425267 37425408 -29242597 + MER33 DNA MER1_type 2 155 -2430 2328 81 3 0 chr20 37425408 37425715 -29242290 - AluSp SINE Alu -5 308 1 1120 152 28 121 chr20 37425715 37425872 -29242133 + MER33 DNA MER1_type 155 264 -2321 2269 104 0 3 chr20 37425872 37426180 -29241825 + AluSp SINE Alu 1 307 -6 1120 152 28 121 chr20 37426180 37426235 -29241770 + MER33 DNA MER1_type 264 323 -1 928 271 77 58 chr20 37426235 37426570 -29241435 - L2 LINE L2 -194 3119 2772 321 355 43 7 chr20 37426569 37426707 -29241298 - MIR3 SINE MIR -28 180 38 * 355 330 96 0 chr20 37426721 37426909 -29241096 - MIR SINE MIR -56 206 1 1876 168 0 0 chr20 37427736 37428046 -29239959 + AluJb SINE Alu 1 310 -2 808 226 45 6 chr20 37428111 37428288 -29239717 - MIR SINE MIR -77 185 2 444 302 62 26 chr20 37428288 37428475 -29239530 - MIR SINE MIR -21 241 48 446 145 72 0 chr20 37428673 37428756 -29239249 - MER5A DNA MER1_type -68 121 33 502 234 17 15 chr20 37428879 37429011 -29238994 + MIR3 SINE MIR 65 202 -6 550 305 12 36 chr20 37429075 37429242 -29238763 + MIR3 SINE MIR 30 192 -16 443 366 49 9 chr20 37430093 37430317 -29237688 - L1MC4a LINE L1 -1903 5905 5673 726 168 0 46 chr20 37431022 37431153 -29236852 - FLAM_C SINE Alu -8 125 1 325 243 155 62 chr20 37431173 37431399 -29236606 - L1MC4a LINE L1 -1439 6369 6123 202 369 0 0 chr20 37431783 37431848 -29236157 + L2 LINE L2 3208 3272 0 1259 183 186 3 chr20 37432067 37432378 -29235627 - L1MD3 LINE L1 -10 7985 7618 2276 94 27 0 chr20 37432750 37433049 -29234956 - AluSp SINE Alu -6 307 1 210 288 23 141 chr20 37433145 37433322 -29234683 - L2 LINE L2 -89 3183 3028 1814 161 14 0 chr20 37433409 37433695 -29234310 + AluJo SINE Alu 5 294 -18 780 204 20 146 chr20 37434088 37434382 -29233623 + MIR SINE MIR 4 260 -2 22 0 0 0 chr20 37434434 37434456 -29233549 + AT_rich Low_complexity Low_complexity 1 22 0 15575 122 45 9 chr20 37434892 37436901 -29231104 - Tigger1 DNA MER2_type -2 2416 480 204 40 0 0 chr20 37436901 37436926 -29231079 + (GA)n Simple_repeat Simple_repeat 1 25 0 15575 122 45 9 chr20 37436926 37437158 -29230847 - Tigger1 DNA MER2_type -1938 480 258 1821 150 52 0 chr20 37437158 37437444 -29230561 - AluJb SINE Alu -11 301 1 15575 122 45 9 chr20 37437444 37437534 -29230471 - Tigger1 DNA MER2_type -2160 258 1 2356 90 3 0 chr20 37437829 37438128 -29229877 + AluSc SINE Alu 1 300 -9 273 229 131 72 chr20 37438892 37439040 -29228965 - MIR3 SINE MIR -43 165 9 912 290 116 48 chr20 37440381 37441007 -29226998 - L2 LINE L2 -1 3312 2654 564 302 23 0 chr20 37442834 37443006 -29224999 - MIR SINE MIR -24 238 63 236 348 62 5 chr20 37443111 37443265 -29224740 + L2 LINE L2 3072 3312 -1 187 267 0 0 chr20 37443593 37443638 -29224367 - L2 LINE L2 0 3313 3269 278 242 198 11 chr20 37443857 37443948 -29224057 - MIR SINE MIR -135 127 20 463 301 42 42 chr20 37444195 37444408 -29223597 + MIR SINE MIR 41 253 -9 7100 56 6 33 chr20 37446579 37447627 -29220378 - SVA Other Other -629 1386 433 302 230 180 30 chr20 37447900 37448000 -29220005 + MIR3 SINE MIR 44 158 -50 1633 161 13 30 chr20 37448802 37448986 -29219019 - AluJb SINE Alu -1 311 132 2282 81 0 17 chr20 37448986 37449300 -29218705 - AluY SINE Alu 0 311 1 1633 161 13 30 chr20 37449300 37449420 -29218585 - AluJb SINE Alu -180 132 12 26 30 0 0 chr20 37449462 37449495 -29218510 + AT_rich Low_complexity Low_complexity 1 33 0 342 346 53 60 chr20 37449744 37450027 -29217978 - L2 LINE L2 -25 3247 2967 205 346 124 7 chr20 37450337 37450490 -29217515 - L3 LINE CR1 -1108 469 299 647 271 80 44 chr20 37450775 37451135 -29216870 - L1ME LINE L1 -469 5701 5325 2019 139 0 0 chr20 37451164 37451497 -29216508 + AluSx SINE Alu 1 333 0 184 370 43 22 chr20 37451682 37451774 -29216231 - MIR SINE MIR -94 114 21 190 230 95 95 chr20 37451834 37451908 -29216097 + L2 LINE L2 3199 3272 0 222 94 0 0 chr20 37452697 37452729 -29215276 - MIR SINE MIR -74 188 157 239 346 47 19 chr20 37453405 37453616 -29214389 + L3 LINE CR1 1317 1533 -44 1957 142 20 3 chr20 37453881 37454177 -29213828 - AluJo SINE Alu -9 303 3 1946 131 3 13 chr20 37454273 37454571 -29213434 - AluSq SINE Alu -18 295 1 2129 139 0 0 chr20 37454674 37454977 -29213028 + AluSx SINE Alu 1 303 -9 335 331 73 16 chr20 37455032 37455156 -29212849 - MIR SINE MIR -110 152 22 270 219 83 83 chr20 37455427 37455523 -29212482 + MIR3 SINE MIR 89 184 -24 1581 162 70 7 chr20 37457077 37457393 -29210612 + MER33 DNA MER1_type 1 318 -6 351 266 138 9 chr20 37457398 37457507 -29210498 + L2 LINE L2 3150 3272 0 287 352 32 0 chr20 37459446 37459571 -29208434 - MIR3 SINE MIR -68 140 12 799 212 0 0 chr20 37459668 37459800 -29208205 + FLAM_A SINE Alu 1 132 -1 204 327 80 9 chr20 37459819 37459932 -29208073 + MIR3 SINE MIR 1 121 -87 24 32 0 0 chr20 37459932 37459963 -29208042 + AT_rich Low_complexity Low_complexity 1 31 0 5660 140 27 14 chr20 37459964 37460211 -29207794 - L1MA7 LINE L1 0 6291 6049 2553 57 3 0 chr20 37460211 37460507 -29207498 - AluSp SINE Alu -16 297 1 5660 140 27 14 chr20 37460507 37461215 -29206790 - L1MA7 LINE L1 -242 6049 5323 1003 97 0 8 chr20 37461671 37461805 -29206200 - AluJb SINE Alu -179 133 1 353 286 36 0 chr20 37462089 37462201 -29205804 + MIR SINE MIR 85 200 -62 191 309 69 106 chr20 37462274 37462491 -29205514 - L2 LINE L2 -213 3059 2851 1063 260 91 44 chr20 37462506 37462913 -29205092 + L2 LINE L2 2888 3313 0 210 71 0 0 chr20 37464174 37464202 -29203803 + (TCCCC)n Simple_repeat Simple_repeat 3 30 0 238 235 0 0 chr20 37464206 37464257 -29203748 - L2 LINE L2 -1 3271 3221 196 244 37 49 chr20 37464321 37464403 -29203602 - L2 LINE L2 -473 2841 2761 438 274 0 0 chr20 37465231 37465315 -29202690 - MER58 DNA MER1_type -2336 84 1 234 159 45 0 chr20 37465462 37465506 -29202499 + L2 LINE L2 3268 3313 0 1684 126 77 0 chr20 37465516 37465763 -29202242 - AluSx SINE Alu -15 297 32 2272 105 0 3 chr20 37465914 37466220 -29201785 + AluY SINE Alu 1 305 -6 1558 260 85 30 chr20 37466549 37467080 -29200925 - MER68 LTR ERV1 0 562 3 604 236 76 0 chr20 37467197 37467354 -29200651 + MIR SINE MIR 89 257 -5 258 381 42 18 chr20 37467706 37467874 -29200131 - L2 LINE L2 -224 3048 2877 351 0 0 0 chr20 37468051 37468090 -29199915 + (TG)n Simple_repeat Simple_repeat 2 40 0 804 284 128 25 chr20 37468259 37468667 -29199338 - L1MC4a LINE L1 -1897 5911 5462 219 306 149 8 chr20 37468675 37468796 -29199209 + L2 LINE L2 3115 3252 -20 366 179 30 0 chr20 37469574 37469641 -29198364 - Charlie1 DNA MER1_type -4 2757 2689 * 1342 147 16 52 chr20 37469638 37469889 -29198116 - Charlie1 DNA MER1_type -2519 242 1 299 214 43 0 chr20 37470335 37470405 -29197600 - MIR SINE MIR -13 249 177 425 247 34 0 chr20 37470569 37470658 -29197347 + L2 LINE L2 3209 3300 -13 265 262 12 34 chr20 37470656 37470747 -29197258 - MIR SINE MIR -110 98 20 * 343 286 161 6 chr20 37470898 37471059 -29196946 - L3 LINE CR1 -11 1566 1381 253 311 107 0 chr20 37471083 37471186 -29196819 - L3 LINE CR1 -385 1192 1079 197 377 13 0 chr20 37471293 37471370 -29196635 - L2 LINE L2 -7 3265 3188 531 319 20 54 chr20 37471451 37471749 -29196256 - L3 LINE CR1 -677 900 613 2168 131 0 0 chr20 37471776 37472073 -29195932 - AluSx SINE Alu -12 300 4 297 304 87 54 chr20 37472444 37472835 -29195170 + L1ME LINE L1 4628 5031 -1115 557 278 176 13 chr20 37473111 37473491 -29194514 + L1ME LINE L1 5351 5816 -305 549 237 17 40 chr20 37473505 37473678 -29194327 + MER117 DNA MER1_type 1 169 -28 244 257 81 14 chr20 37474320 37474394 -29193611 - L2 LINE L2 -55 3258 3180 865 198 219 50 chr20 37474425 37474666 -29193339 - MIR SINE MIR 0 262 1 281 248 89 30 chr20 37476013 37476068 -29191937 + L2 LINE L2 3204 3254 -59 2012 152 10 13 chr20 37476068 37476377 -29191628 + AluSx SINE Alu 1 308 -4 281 248 89 30 chr20 37476377 37476422 -29191583 + L2 LINE L2 3254 3310 -3 1327 165 39 31 chr20 37476547 37476807 -29191198 - AluJo SINE Alu -8 304 43 280 271 94 12 chr20 37476823 37476908 -29191097 + MIR SINE MIR 171 262 0 248 297 0 0 chr20 37477424 37477488 -29190517 - L2 LINE L2 -4 3268 3205 1592 144 37 9 chr20 37477545 37477869 -29190136 - MLT1A1 LTR MaLR 0 365 1 198 0 0 0 chr20 37480174 37480196 -29187809 + (TAA)n Simple_repeat Simple_repeat 1 22 0 392 309 10 36 chr20 37482702 37482867 -29185138 - MIR SINE MIR -52 210 46 296 310 46 11 chr20 37482902 37482989 -29185016 - MIR SINE MIR -62 146 57 608 115 0 0 chr20 37483250 37483337 -29184668 - FLAM_A SINE Alu 0 142 56 1045 113 0 0 chr20 37483260 37483393 -29184612 - AluJo/FLAM SINE Alu -169 133 1 183 80 0 0 chr20 37483423 37483448 -29184557 + (TGGA)n Simple_repeat Simple_repeat 1 25 0 2190 118 3 0 chr20 37483784 37484071 -29183934 - AluSx SINE Alu -16 296 9 326 197 76 0 chr20 37485236 37485302 -29182703 - MIR3 SINE MIR -43 165 95 198 0 0 0 chr20 37485373 37485395 -29182610 + (TC)n Simple_repeat Simple_repeat 1 22 0 333 125 0 0 chr20 37485401 37485457 -29182548 + (TG)n Simple_repeat Simple_repeat 1 56 0 188 108 0 27 chr20 37485554 37485591 -29182414 + (TTTTC)n Simple_repeat Simple_repeat 5 40 0 2014 134 0 40 chr20 37485602 37485923 -29182082 - AluJo SINE Alu -4 308 1 267 255 221 35 chr20 37486869 37487014 -29180991 - MIR SINE MIR -70 192 21 287 248 59 20 chr20 37487762 37487863 -29180142 + MER5A DNA MER1_type 22 126 -63 26 0 0 0 chr20 37488593 37488619 -29179386 + AT_rich Low_complexity Low_complexity 1 26 0 725 274 47 0 chr20 37489546 37489736 -29178269 + MIR SINE MIR 63 261 -1 185 233 0 23 chr20 37489748 37489791 -29178214 + MIR SINE MIR 216 257 -5 595 300 141 26 chr20 37490529 37491133 -29176872 - L2 LINE L2 -1 3312 2626 285 328 84 0 chr20 37492709 37492828 -29175177 + MIR3 SINE MIR 34 162 -46 279 281 67 89 chr20 37492872 37493007 -29174998 - L2 LINE L2 0 3272 3141 255 191 0 0 chr20 37493138 37493180 -29174825 - MIR SINE MIR -113 149 108 186 337 36 12 chr20 37493414 37493497 -29174508 + MIR SINE MIR 42 126 -82 411 324 28 45 chr20 37493841 37494020 -29173985 + MIR SINE MIR 22 197 -65 308 304 89 53 chr20 37495347 37495853 -29172152 - L2 LINE L2 -18 3254 2717 381 271 145 29 chr20 37497448 37497536 -29170469 - L1ME LINE L1 -317 5804 5728 1990 127 54 30 chr20 37497536 37497737 -29170268 + MER44D DNA MER2_type 1 196 -2295 2362 99 0 13 chr20 37497737 37498051 -29169954 - AluSx SINE Alu -2 310 1 1990 127 54 30 chr20 37498051 37498180 -29169825 + MER44D DNA MER2_type 196 609 0 381 271 145 29 chr20 37498180 37498298 -29169707 - L1ME LINE L1 -393 5728 5574 333 277 122 43 chr20 37498346 37498534 -29169471 - L1ME LINE L1 -2338 5470 5295 479 229 33 82 chr20 37499980 37500158 -29167847 + MIR SINE MIR 48 216 -46 266 329 96 36 chr20 37500158 37500325 -29167680 + MER5B DNA MER1_type 1 177 -1 412 325 24 8 chr20 37500780 37500903 -29167102 - MIR3 SINE MIR -81 127 3 876 168 47 68 chr20 37501181 37501309 -29166696 + MER5A DNA MER1_type 1 126 -63 2350 65 7 0 chr20 37501309 37501620 -29166385 - AluY SINE Alu 0 313 1 876 168 47 68 chr20 37501620 37501680 -29166325 + MER5A DNA MER1_type 126 186 -3 201 162 0 27 chr20 37502835 37502872 -29165133 + CT-rich Low_complexity Low_complexity 2 37 0 2076 142 6 3 chr20 37502875 37503186 -29164819 - AluJb SINE Alu 0 312 1 275 263 83 23 chr20 37503186 37503319 -29164686 - MIR SINE MIR -59 203 63 213 277 31 15 chr20 37503703 37503768 -29164237 - MIR SINE MIR -160 102 37 248 130 0 13 chr20 37503914 37503964 -29164041 - MIR SINE MIR -102 160 113 2318 206 112 8 chr20 37503977 37504505 -29163500 - MER119 DNA MER1_type 0 583 1 202 339 0 0 chr20 37504666 37504725 -29163280 + L2 LINE L2 3213 3271 -1 215 189 0 0 chr20 37507626 37507663 -29160342 - L3 LINE CR1 -180 1397 1361 272 262 89 63 chr20 37507676 37507867 -29160138 + L1ME3A LINE L1 5968 6163 -7 186 103 0 0 chr20 37509124 37509153 -29158852 + (A)n Simple_repeat Simple_repeat 1 29 0 204 333 43 75 chr20 37509307 37509400 -29158605 - L2 LINE L2 -44 3228 3139 347 279 93 19 chr20 37509518 37509679 -29158326 - L1ME4a LINE L1 -267 5854 5682 970 151 125 31 chr20 37509702 37509894 -29158111 - MER6B DNA MER2_type 0 210 1 356 241 70 70 chr20 37510852 37511039 -29156966 + MIR SINE MIR 2 188 -74 321 297 89 20 chr20 37511103 37511204 -29156801 - L2 LINE L2 -49 3223 3116 418 118 237 11 chr20 37511402 37511495 -29156510 - L1ME1 LINE L1 -5 6161 6048 1787 150 64 13 chr20 37511495 37511868 -29156137 - Charlie5 DNA MER1_type 0 2624 2233 523 246 78 0 chr20 37511877 37512019 -29155986 - MER3 DNA MER1_type -41 168 16 937 169 0 31 chr20 37512023 37512183 -29155822 - AluJb SINE Alu -157 155 1 14614 137 31 14 chr20 37512184 37515438 -29152567 - L1 LINE L1 -2837 4728 1417 308 262 39 19 chr20 37515482 37515585 -29152420 + L1MC4 LINE L1 6599 6703 -1339 815 218 83 6 chr20 37516097 37516253 -29151752 - FAM SINE Alu -12 173 6 2810 7 0 0 chr20 37516316 37516616 -29151389 - AluYa5 SINE Alu -11 300 1 248 289 84 12 chr20 37517195 37517278 -29150727 + L2 LINE L2 3132 3220 -52 3065 205 91 20 chr20 37519763 37520564 -29147441 - L1ME1 LINE L1 -44 6191 5334 1865 146 29 0 chr20 37520597 37520872 -29147133 + MER1B DNA MER1_type 57 339 0 275 219 143 0 chr20 37520899 37521018 -29146987 - L1ME1 LINE L1 -913 5302 5167 * 760 199 107 26 chr20 37521017 37521289 -29146716 - L1ME1 LINE L1 -2736 3479 3186 189 121 0 0 chr20 37521295 37521328 -29146677 + (TG)n Simple_repeat Simple_repeat 2 34 0 627 244 0 0 chr20 37521330 37521445 -29146560 - FLAM_A SINE Alu -18 115 1 1150 152 37 5 chr20 37521509 37521700 -29146305 + MER46A DNA MER2_type 36 232 -4 3146 190 41 11 chr20 37521739 37522449 -29145556 - L1ME1 LINE L1 -3121 3094 2364 424 155 91 35 chr20 37522460 37522579 -29145426 + MLT1B LTR MaLR 1 145 -240 1105 234 24 70 chr20 37522617 37522753 -29145252 - L1ME1 LINE L1 -4411 1985 1844 2419 87 0 0 chr20 37522753 37523051 -29144954 - AluSg SINE Alu -12 298 1 1105 234 24 70 chr20 37523051 37523286 -29144719 - L1ME1 LINE L1 -4552 1844 1631 1193 131 0 0 chr20 37523287 37523455 -29144550 - AluSg/x SINE Alu -10 302 135 1975 141 6 28 chr20 37523455 37523774 -29144231 - AluSx SINE Alu 0 312 1 402 269 115 75 chr20 37523775 37524106 -29143899 - L1ME1 LINE L1 -4619 1596 1253 1019 183 0 83 chr20 37524108 37524337 -29143668 - AluJb SINE Alu -13 299 90 2768 216 179 36 chr20 37524446 37525503 -29142502 - L1ME1 LINE L1 -5153 1243 36 233 296 23 11 chr20 37525519 37525607 -29142398 - L1M4 LINE L1 -1773 4373 4285 787 279 72 10 chr20 37525624 37525914 -29142091 - MLT1I LTR MaLR -4 405 98 569 254 25 0 chr20 37525953 37526071 -29141934 - MER63A DNA MER1_type -1 209 89 21 0 0 0 chr20 37526327 37526348 -29141657 + AT_rich Low_complexity Low_complexity 1 21 0 372 314 105 73 chr20 37526754 37527181 -29140824 + L2 LINE L2 2832 3272 0 283 328 92 65 chr20 37528074 37528705 -29139300 + L2 LINE L2 2570 3250 -22 327 261 136 0 chr20 37528820 37528908 -29139097 + MER81 DNA DNA 1 100 -14 552 273 130 68 chr20 37529778 37530100 -29137905 + L2 LINE L2 2879 3220 -93 1982 217 70 5 chr20 37530600 37531042 -29136963 + L1M4 LINE L1 3906 4376 -1770 2539 139 67 17 chr20 37531042 37531503 -29136502 + L1MB8 LINE L1 5694 6177 -1 307 289 143 15 chr20 37531503 37531749 -29136256 - L1ME4a LINE L1 -55 6066 5782 202 301 96 44 chr20 37533279 37533415 -29134590 - MIR SINE MIR -4 258 116 * 317 265 88 48 chr20 37533392 37533539 -29134466 + MIR3 SINE MIR 21 173 -35 197 316 26 18 chr20 37534245 37534359 -29133646 + L2 LINE L2 2906 3020 -252 2197 108 29 7 chr20 37534363 37534669 -29133336 - AluSq SINE Alu 0 313 1 234 276 23 35 chr20 37534802 37534889 -29133116 + L2 LINE L2 3187 3272 0 3557 154 72 11 chr20 37535350 37535979 -29132026 - LTR51 LTR ERV1 0 671 5 436 322 41 0 chr20 37536098 37536269 -29131736 + MIR SINE MIR 63 240 -22 209 340 188 5 chr20 37537628 37538048 -29129957 + L2 LINE L2 2150 2646 -668 261 322 87 27 chr20 37538378 37538527 -29129478 - MIR SINE MIR -55 207 50 313 217 0 0 chr20 37538774 37538834 -29129171 + L2 LINE L2 3213 3272 0 193 291 145 8 chr20 37539000 37539091 -29128914 + MIR SINE MIR 124 236 -26 1414 225 105 19 chr20 37539091 37539509 -29128496 - MSTB2 LTR MaLR 0 457 4 193 291 145 8 chr20 37539509 37539534 -29128471 + MIR SINE MIR 236 256 -6 682 275 0 35 chr20 37539764 37539993 -29128012 + MIR SINE MIR 15 235 -27 344 268 113 42 chr20 37541028 37541241 -29126764 + MIR SINE MIR 32 259 -3 347 292 58 15 chr20 37542018 37542155 -29125850 - MER5A DNA MER1_type 0 189 47 256 277 10 69 chr20 37542241 37542342 -29125663 + MIR SINE MIR 161 255 -7 566 229 30 32 chr20 37542955 37543133 -29124872 - MIR SINE MIR -56 206 34 253 230 198 16 chr20 37543565 37543691 -29124314 - MER5B DNA MER1_type -2 176 28 314 236 65 8 chr20 37543888 37544011 -29123994 - L1ME4a LINE L1 -3 6118 5989 282 29 0 0 chr20 37544044 37544079 -29123926 + (TG)n Simple_repeat Simple_repeat 2 36 0 2374 93 0 0 chr20 37544288 37544590 -29123415 - AluSq SINE Alu -11 302 1 270 240 102 79 chr20 37545349 37545543 -29122462 + MIR3 SINE MIR 7 212 -50 325 202 112 0 chr20 37546500 37546589 -29121416 + MIR SINE MIR 40 138 -124 567 190 177 32 chr20 37546589 37546747 -29121258 - MER5A DNA MER1_type 0 189 9 183 233 68 41 chr20 37546755 37546828 -29121177 + MIR SINE MIR 131 205 -57 6118 142 20 16 chr20 37547592 37548665 -29119340 + Ricksha_a DNA DNA 2 1123 -58 2277 109 0 7 chr20 37548845 37549149 -29118856 - AluSx SINE Alu -10 302 1 1729 168 46 32 chr20 37549455 37549825 -29118180 + THE1C LTR MaLR 1 375 0 490 244 91 28 chr20 37550380 37550556 -29117449 - L1MC5 LINE L1 -36 7925 7739 757 233 33 17 chr20 37550704 37550884 -29117121 - MER20 DNA MER1_type 0 219 37 442 271 68 17 chr20 37551671 37551848 -29116157 + MIR SINE MIR 65 250 -12 658 244 45 65 chr20 37553504 37553705 -29114300 - MLT1J LTR MaLR 0 511 315 189 236 91 18 chr20 37553705 37553760 -29114245 + L2 LINE L2 3214 3272 -41 792 209 78 119 chr20 37553777 37554043 -29113962 - MLT1J LTR MaLR -202 309 34 2271 131 0 0 chr20 37554043 37554355 -29113650 + AluSx SINE Alu 1 312 0 2259 116 0 0 chr20 37554365 37554658 -29113347 + AluSq SINE Alu 1 293 -20 792 209 78 119 chr20 37554658 37554700 -29113305 - MLT1J LTR MaLR -486 25 3 417 251 41 78 chr20 37555592 37555811 -29112194 - L1MC4 LINE L1 -3 8039 7829 1803 176 104 35 chr20 37555847 37556333 -29111672 - L1ME2 LINE L1 -19 6143 5611 418 251 43 49 chr20 37556371 37556534 -29111471 - MIR3 SINE MIR -24 184 23 214 365 26 9 chr20 37556897 37557012 -29110993 + L2 LINE L2 2906 3022 -250 594 249 51 17 chr20 37557443 37557620 -29110385 + MIR SINE MIR 69 251 -11 1799 158 0 7 chr20 37558822 37559094 -29108911 - AluJb SINE Alu -30 282 13 630 134 67 40 chr20 37559114 37559263 -29108742 - L1MA9 LINE L1 0 6312 6160 2253 133 19 17 chr20 37559598 37559960 -29108045 - MER47A DNA MER2_type -3 363 1 2349 106 0 3 chr20 37560326 37560638 -29107367 - AluY SINE Alu 0 311 1 227 304 0 0 chr20 37560699 37560755 -29107250 + L2 LINE L2 3193 3248 -24 324 282 20 12 chr20 37561446 37561563 -29106442 - MIR SINE MIR -62 146 30 222 341 82 0 chr20 37562055 37562190 -29105815 + MIR3 SINE MIR 42 187 -21 189 171 0 0 chr20 37562541 37562576 -29105429 + (TG)n Simple_repeat Simple_repeat 2 36 0 436 325 52 20 chr20 37563614 37563866 -29104139 + MIR SINE MIR 3 262 0 433 141 28 0 chr20 37564110 37564181 -29103824 + MLT2B2 LTR ERVL 1 73 -442 * 987 173 46 0 chr20 37564178 37564351 -29103654 + MLT2B1 LTR ERVL 340 520 0 871 292 33 64 chr20 37564351 37564806 -29103199 + L1MC/D LINE L1 5377 5817 -1991 249 313 86 76 chr20 37565312 37565721 -29102284 + L2 LINE L2 2842 3254 -18 333 291 135 7 chr20 37565722 37565863 -29102142 + MIR3 SINE MIR 35 193 -15 1208 239 67 37 chr20 37566748 37567154 -29100851 - L2 LINE L2 -3 3310 2893 * 1875 241 76 38 chr20 37567151 37567578 -29100427 - L2 LINE L2 -538 2776 2314 1895 151 24 7 chr20 37567578 37567876 -29100129 + AluJb SINE Alu 1 303 -9 1875 241 76 38 chr20 37567876 37568107 -29099898 - L2 LINE L2 -1000 2314 2093 363 272 160 24 chr20 37569461 37569630 -29098375 + MIR SINE MIR 1 192 -70 215 309 15 0 chr20 37570112 37570180 -29097825 - MIR SINE MIR -104 158 90 247 268 28 0 chr20 37570281 37570352 -29097653 + MIR SINE MIR 73 145 -117 232 263 25 12 chr20 37571791 37571871 -29096134 - MIR3 SINE MIR -24 184 104 251 274 142 9 chr20 37573204 37573317 -29094688 + MIR SINE MIR 17 144 -64 282 286 51 0 chr20 37573505 37573603 -29094402 + MIR SINE MIR 68 170 -92 1796 151 0 4 chr20 37573672 37573937 -29094068 + AluSx SINE Alu 36 299 -13 238 281 112 12 chr20 37575645 37575856 -29092149 + L2 LINE L2 2795 3087 -226 2141 123 0 19 chr20 37577119 37577428 -29090577 - AluJo SINE Alu -9 303 1 325 257 29 43 chr20 37577649 37577810 -29090195 + MIR SINE MIR 35 192 -70 566 319 103 35 chr20 37577842 37578385 -29089620 + L2 LINE L2 2271 2850 -464 199 351 0 0 chr20 37578573 37578630 -29089375 - L2 LINE L2 -6 3307 3251 865 278 12 4 chr20 37578723 37578964 -29089041 + MIR SINE MIR 20 262 0 575 261 37 53 chr20 37580552 37580797 -29087208 + MIR SINE MIR 22 262 0 281 348 30 0 chr20 37581639 37581803 -29086202 - MER117 DNA MER1_type -28 169 1 352 313 35 0 chr20 37581803 37581918 -29086087 - MIR3 SINE MIR -48 160 42 438 233 106 58 chr20 37583423 37583524 -29084481 + MIR SINE MIR 50 145 -117 1943 138 3 0 chr20 37583524 37583861 -29084144 - AluSx SINE Alu 0 338 1 438 233 106 58 chr20 37583861 37583947 -29084058 + MIR SINE MIR 145 247 -15 336 263 132 120 chr20 37584100 37584514 -29083491 + L2 LINE L2 2848 3272 0 1580 105 0 0 chr20 37584927 37585136 -29082869 + AluSq SINE Alu 1 209 -104 322 94 0 0 chr20 37585136 37585189 -29082816 + AluSq SINE Alu 247 299 -4 1626 193 7 20 chr20 37586881 37587187 -29080818 + AluJb SINE Alu 1 302 -10 474 154 145 0 chr20 37587572 37587689 -29080316 + L1MB8 LINE L1 6036 6169 -9 207 0 0 0 chr20 37587693 37587716 -29080289 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 440 200 0 0 chr20 37587982 37588062 -29079943 - Tigger5 DNA MER2_type 0 2323 2244 2066 97 62 0 chr20 37588066 37588355 -29079650 + AluSp SINE Alu 2 308 -5 285 211 8 42 chr20 37588359 37588471 -29079534 - Tigger5 DNA MER2_type -2131 192 28 1537 116 70 52 chr20 37589681 37590009 -29077996 + MER44D DNA MER2_type 6 609 0 220 255 20 0 chr20 37590146 37590197 -29077808 + L2 LINE L2 3209 3260 -12 252 298 29 48 chr20 37590458 37590562 -29077443 + MIR3 SINE MIR 82 183 -25 336 292 67 43 chr20 37590617 37590768 -29077237 + MIR SINE MIR 1 162 -46 185 377 0 0 chr20 37591512 37591581 -29076424 + L2 LINE L2 3201 3269 -3 558 241 56 37 chr20 37591833 37592049 -29075956 + L2 LINE L2 3079 3298 -15 248 303 106 56 chr20 37592093 37592235 -29075770 - L2 LINE L2 -12 3260 3112 328 292 62 0 chr20 37592275 37592371 -29075634 - L2 LINE L2 -31 3241 3140 202 344 16 0 chr20 37592753 37592817 -29075188 - L2 LINE L2 -1073 2241 2177 405 158 101 8 chr20 37594413 37594536 -29073469 - L1MB3 LINE L1 -98 6085 5941 680 314 55 13 chr20 37595323 37595559 -29072446 + MIR SINE MIR 17 262 0 235 238 0 48 chr20 37595627 37595690 -29072315 + MIR SINE MIR 81 140 -122 228 135 0 0 chr20 37596663 37596700 -29071305 + (CA)n Simple_repeat Simple_repeat 2 38 0 419 286 143 11 chr20 37597296 37597478 -29070527 + MIR SINE MIR 51 256 -6 181 268 0 0 chr20 37598508 37598549 -29069456 - L2 LINE L2 -90 3223 3183 180 347 28 14 chr20 37598905 37598977 -29069028 + L2 LINE L2 104 176 -3138 463 295 112 14 chr20 37599100 37599424 -29068581 + L2 LINE L2 237 646 -2668 681 298 217 13 chr20 37599424 37599871 -29068134 + L2 LINE L2 2423 2960 -354 267 331 25 38 chr20 37599883 37600040 -29067965 + L2 LINE L2 3097 3251 -62 628 208 54 0 chr20 37600052 37600182 -29067823 - MER5A DNA MER1_type -4 185 49 198 0 0 0 chr20 37600187 37600209 -29067796 + (CTG)n Simple_repeat Simple_repeat 2 23 0 1064 178 104 107 chr20 37600262 37600628 -29067377 - MLT1A1 LTR MaLR 0 365 1 323 248 124 0 chr20 37601445 37601558 -29066447 + MER5B DNA MER1_type 52 178 0 2356 82 0 13 chr20 37601615 37601930 -29066075 - AluY SINE Alu 0 311 1 950 176 29 12 chr20 37601932 37602102 -29065903 - AluJb SINE Alu -9 303 131 227 284 40 14 chr20 37602102 37602176 -29065829 + MIR SINE MIR 79 154 -108 2007 138 3 3 chr20 37602307 37602605 -29065400 + AluJb SINE Alu 1 298 -14 282 261 0 0 chr20 37602863 37602932 -29065073 - MER117 DNA MER1_type -126 71 3 335 377 7 7 chr20 37603210 37603356 -29064649 - MIR SINE MIR -109 153 8 479 293 117 5 chr20 37605170 37605375 -29062630 - L1MC/D LINE L1 -2014 5794 5567 208 298 160 11 chr20 37605548 37605642 -29062363 - MIR SINE MIR -1 261 154 631 144 10 0 chr20 37605654 37605751 -29062254 - AluJ/FLAM SINE Alu -213 99 2 218 234 289 23 chr20 37605753 37605881 -29062124 - MIR SINE MIR -100 162 1 228 262 16 16 chr20 37606367 37606428 -29061577 - L2 LINE L2 -11 3302 3242 636 317 78 32 chr20 37607320 37607692 -29060313 - L2 LINE L2 -77 3236 2848 393 286 108 24 chr20 37607717 37607930 -29060075 - L2 LINE L2 -569 2745 2515 2149 120 20 0 chr20 37608550 37608851 -29059154 + AluSx SINE Alu 1 307 -5 264 289 135 17 chr20 37608926 37609094 -29058911 - MIR SINE MIR -18 244 44 2016 105 52 0 chr20 37609224 37609510 -29058495 + AluSq SINE Alu 1 301 -12 422 311 30 54 chr20 37609518 37609685 -29058320 - MIR SINE MIR -21 241 79 541 197 97 1 chr20 37610092 37610220 -29057785 + MIR SINE MIR 9 148 -60 443 356 86 29 chr20 37610889 37611263 -29056742 - L2 LINE L2 -24 3248 2854 267 326 63 37 chr20 37611373 37611563 -29056442 - L2 LINE L2 -3 3269 3075 361 333 47 0 chr20 37611865 37612015 -29055990 - MIR3 SINE MIR -38 170 14 182 294 88 0 chr20 37612637 37612705 -29055300 + L2 LINE L2 3177 3250 -63 576 285 21 112 chr20 37612738 37612905 -29055100 - L2 LINE L2 -37 3276 3095 1882 155 10 0 chr20 37612905 37613209 -29054796 + AluJo SINE Alu 1 307 -5 2031 103 18 4 chr20 37613217 37613529 -29054476 + AluSq SINE Alu 1 316 0 576 285 21 112 chr20 37613529 37613726 -29054279 - L2 LINE L2 -225 3088 2936 2179 108 3 7 chr20 37614224 37614530 -29053475 - AluSx SINE Alu -7 305 1 342 337 31 31 chr20 37614589 37614752 -29053253 - MIR SINE MIR -54 208 46 406 269 7 48 chr20 37614758 37614903 -29053102 + L1MC4 LINE L1 7738 7876 -166 283 340 9 28 chr20 37615062 37615168 -29052837 - MIR SINE MIR -92 170 67 343 283 26 62 chr20 37615951 37616113 -29051892 - MIR SINE MIR -65 143 27 261 295 162 0 chr20 37616156 37616261 -29051744 - L3 LINE CR1 -111 1466 1345 343 328 64 0 chr20 37616316 37616441 -29051564 - MIR3 SINE MIR -7 201 69 315 303 198 21 chr20 37616551 37617252 -29050753 - L2 LINE L2 -1 3271 2460 528 243 46 33 chr20 37617754 37617906 -29050099 - MIR SINE MIR -58 204 51 381 316 40 29 chr20 37618297 37618471 -29049534 + MIR3 SINE MIR 8 183 -25 547 288 16 78 chr20 37618505 37618592 -29049413 - MIR SINE MIR -3 259 168 2112 124 13 7 chr20 37618592 37618898 -29049107 + AluSx SINE Alu 1 308 -4 547 288 16 78 chr20 37618898 37619053 -29048952 - MIR SINE MIR -94 168 32 339 299 97 26 chr20 37619210 37619365 -29048640 + MIR SINE MIR 73 237 -25 332 287 147 0 chr20 37619372 37619501 -29048504 - MIR SINE MIR -67 195 48 264 59 0 0 chr20 37619560 37619594 -29048411 + (TGGA)n Simple_repeat Simple_repeat 2 35 0 221 318 60 33 chr20 37620279 37620430 -29047575 - MIR3 SINE MIR -24 184 30 1002 174 0 11 chr20 37620472 37620650 -29047355 + FRAM SINE Alu 1 175 -1 268 370 48 7 chr20 37620797 37620943 -29047062 + MIR SINE MIR 111 262 0 * 663 225 102 5 chr20 37620939 37621148 -29046857 + MIR SINE MIR 31 256 -6 284 328 103 0 chr20 37621203 37621319 -29046686 - L2 LINE L2 -5 3267 3140 497 269 182 8 chr20 37621353 37621595 -29046410 - L2 LINE L2 -4 3309 3026 435 292 51 7 chr20 37622040 37622177 -29045828 - MIR SINE MIR -74 188 46 252 348 0 0 chr20 37622187 37622279 -29045726 + L3 LINE CR1 1379 1470 -107 242 325 38 0 chr20 37622328 37622408 -29045597 - L2 LINE L2 -62 3251 3169 1458 175 41 15 chr20 37622443 37622711 -29045294 + AluJo SINE Alu 1 275 -37 1128 85 11 6 chr20 37622728 37622758 -29045247 + (TTCC)n Simple_repeat Simple_repeat 1 207 0 1128 85 11 6 chr20 37622758 37622934 -29045071 + (TTCC)n Simple_repeat Simple_repeat 3 179 0 1606 183 16 22 chr20 37622987 37623299 -29044706 - AluJb SINE Alu -1 311 2 400 278 194 5 chr20 37623604 37623789 -29044216 + MIR SINE MIR 22 252 -10 1895 139 6 16 chr20 37623856 37624179 -29043826 + MER33 DNA MER1_type 1 320 -4 556 174 97 45 chr20 37624509 37624664 -29043341 + MLT1B LTR MaLR 1 163 -211 2069 116 0 7 chr20 37624675 37624993 -29043012 + AluSx SINE Alu 1 316 0 211 209 23 0 chr20 37625013 37625056 -29042949 + CT-rich Low_complexity Low_complexity 4 47 0 766 252 5 19 chr20 37625057 37625263 -29042742 + MLT1B LTR MaLR 188 390 0 447 320 39 22 chr20 37625376 37625554 -29042451 + MIR3 SINE MIR 3 183 -25 1501 178 34 20 chr20 37625570 37625868 -29042137 + AluJo SINE Alu 1 302 -10 201 298 36 56 chr20 37626467 37626616 -29041389 + MER5A DNA MER1_type 20 184 -5 679 254 12 12 chr20 37626629 37626794 -29041211 + MER5B DNA MER1_type 1 165 -13 346 295 0 11 chr20 37626846 37626941 -29041064 - MIR SINE MIR -73 135 42 478 297 62 5 chr20 37628369 37628563 -29039442 + MIR SINE MIR 3 206 -56 335 322 70 0 chr20 37628617 37628760 -29039245 + MIR3 SINE MIR 1 154 -54 237 324 29 20 chr20 37628810 37628912 -29039093 + MIR SINE MIR 77 179 -83 * 1094 243 42 0 chr20 37628878 37629117 -29038888 - MIR SINE MIR 0 262 14 213 324 68 0 chr20 37629127 37629201 -29038804 + MIR SINE MIR 158 236 -26 2282 108 0 0 chr20 37629494 37629800 -29038205 - AluSg SINE Alu -4 306 1 185 305 0 51 chr20 37630057 37630116 -29037889 + MIR SINE MIR 42 97 -111 33 25 0 0 chr20 37630845 37630885 -29037120 + GC_rich Low_complexity Low_complexity 1 40 0 181 325 84 0 chr20 37631008 37631091 -29036914 + MIR SINE MIR 76 165 -97 363 182 0 0 chr20 37631197 37631274 -29036731 + (CA)n Simple_repeat Simple_repeat 1 77 0 461 325 95 26 chr20 37631444 37631675 -29036330 - MIR SINE MIR 0 262 16 226 106 43 0 chr20 37632003 37632050 -29035955 + GA-rich Low_complexity Low_complexity 2 50 0 21 0 0 0 chr20 37632292 37632313 -29035692 + GC_rich Low_complexity Low_complexity 1 21 0 213 94 0 0 chr20 37632926 37632958 -29035047 + (CA)n Simple_repeat Simple_repeat 1 32 0 516 265 26 13 chr20 37633936 37634087 -29033918 - MIR SINE MIR -95 167 15 183 129 32 0 chr20 37635343 37635374 -29032631 + L2 LINE L2 3264 3295 -18 371 282 159 18 chr20 37635454 37635624 -29032381 - MIR SINE MIR -10 252 59 324 293 18 67 chr20 37635978 37636070 -29031935 - MER5B DNA MER1_type -22 156 74 1737 173 3 3 chr20 37636070 37636371 -29031634 - AluJo SINE Alu -3 309 9 324 293 18 67 chr20 37636371 37636442 -29031563 - MER5B DNA MER1_type -104 74 1 216 122 0 0 chr20 37636626 37636667 -29031338 + (CA)n Simple_repeat Simple_repeat 1 41 0 239 308 55 11 chr20 37637350 37637441 -29030564 - MIR3 SINE MIR -28 180 86 1822 146 33 0 chr20 37637503 37637804 -29030201 + AluJo SINE Alu 1 311 -1 668 296 20 5 chr20 37637831 37638030 -29029975 - MIR SINE MIR -30 232 31 189 74 0 0 chr20 37639424 37639451 -29028554 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 541 271 33 20 chr20 37639451 37639602 -29028403 - L2 LINE L2 -13 3300 3148 1826 158 3 19 chr20 37639604 37639920 -29028085 + AluJo SINE Alu 1 311 -1 1790 78 0 0 chr20 37639963 37640194 -29027811 + AluSg1 SINE Alu 1 231 -78 216 0 0 0 chr20 37640208 37640232 -29027773 + (A)n Simple_repeat Simple_repeat 1 24 0 300 318 0 0 chr20 37640299 37640384 -29027621 + L3 LINE CR1 1428 1512 -65 286 235 78 0 chr20 37640690 37640792 -29027213 + MIR3 SINE MIR 61 170 -38 288 130 0 0 chr20 37640851 37640897 -29027108 + (TG)n Simple_repeat Simple_repeat 1 46 0 406 315 103 0 chr20 37641008 37641192 -29026813 - MIR SINE MIR -44 218 16 268 188 8 31 chr20 37641782 37641910 -29026095 + CT-rich Low_complexity Low_complexity 2 126 0 247 143 0 0 chr20 37642059 37642101 -29025904 + L2 LINE L2 3231 3272 0 287 315 118 0 chr20 37642306 37642433 -29025572 - MIR3 SINE MIR -61 147 6 718 162 0 27 chr20 37643114 37643299 -29024706 + (TG)n Simple_repeat Simple_repeat 1 180 0 717 143 29 6 chr20 37643320 37643495 -29024510 + (TG)n Simple_repeat Simple_repeat 2 180 0 199 202 69 58 chr20 37643495 37643606 -29024399 + L2 LINE L2 2879 2990 -282 261 348 68 0 chr20 37643698 37643816 -29024189 - MIR3 SINE MIR -54 154 29 252 288 144 9 chr20 37644545 37644656 -29023349 - MIR SINE MIR -118 144 19 448 266 18 0 chr20 37645580 37645693 -29022312 + MIR SINE MIR 87 201 -61 1275 184 137 3 chr20 37645711 37646004 -29022001 + L1MB5 LINE L1 5810 6143 -26 2103 119 0 10 chr20 37646004 37646316 -29021689 + AluSg SINE Alu 1 309 -1 339 343 127 0 chr20 37646442 37646623 -29021382 - MIR SINE MIR -9 253 50 1380 237 43 8 chr20 37647320 37647691 -29020314 - MER113 DNA MER1_type? -133 388 5 222 280 51 59 chr20 37647691 37647809 -29020196 + L2 LINE L2 2950 3066 -206 233 154 0 0 chr20 37647919 37647958 -29020047 - MER91 DNA MER1_type -99 41 3 426 288 120 11 chr20 37648761 37648952 -29019053 + MIR SINE MIR 30 241 -21 460 305 67 12 chr20 37649131 37649295 -29018710 + MIR SINE MIR 20 192 -70 195 138 0 0 chr20 37649732 37649761 -29018244 + L2 LINE L2 3268 3296 -17 233 56 0 28 chr20 37649761 37649797 -29018208 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 246 95 0 0 chr20 37649867 37649909 -29018096 + (ATTG)n Simple_repeat Simple_repeat 2 43 0 523 273 127 48 chr20 37650456 37650771 -29017234 - L2 LINE L2 -16 3297 2958 893 111 0 0 chr20 37650803 37650929 -29017076 - FRAM SINE Alu 0 40 1 1919 172 91 0 chr20 37650997 37651381 -29016624 - L1MB3 LINE L1 -7 6176 5758 564 285 134 0 chr20 37651998 37652177 -29015828 - MIR SINE MIR -14 248 46 575 255 70 19 chr20 37652768 37652925 -29015080 + MIR SINE MIR 48 212 -50 1835 135 0 55 chr20 37652929 37653240 -29014765 + AluJo SINE Alu 3 296 -16 2385 83 0 3 chr20 37653243 37653556 -29014449 + AluSq SINE Alu 1 312 -1 180 0 0 0 chr20 37653649 37653669 -29014336 + (CAG)n Simple_repeat Simple_repeat 1 20 0 193 238 0 0 chr20 37653789 37653831 -29014174 + L3 LINE CR1 1422 1463 -114 350 167 15 15 chr20 37653957 37654023 -29013982 + MIR SINE MIR 82 147 -61 334 310 58 12 chr20 37654299 37654470 -29013535 - MIR3 SINE MIR -21 187 9 247 276 90 21 chr20 37654813 37654958 -29013047 + L2 LINE L2 2945 3099 -173 2173 113 0 0 chr20 37655033 37655334 -29012671 - AluSq SINE Alu -12 301 1 284 56 0 0 chr20 37655365 37655401 -29012604 + Alu SINE Alu 1 36 -266 846 104 97 0 chr20 37655401 37655535 -29012470 + AluSc SINE Alu 156 302 -7 562 90 13 0 chr20 37655538 37655616 -29012389 + MADE1 DNA Mariner 1 79 -1 228 303 109 25 chr20 37655650 37655771 -29012234 + MIR SINE MIR 20 148 -72 962 185 43 79 chr20 37655828 37655946 -29012059 + MER33 DNA MER1_type 30 151 -2434 2051 120 10 0 chr20 37655946 37656237 -29011768 - AluSx SINE Alu -18 294 1 962 185 43 79 chr20 37656237 37656421 -29011584 + MER33 DNA MER1_type 151 321 -3 221 288 45 45 chr20 37656889 37657000 -29011005 + MIR SINE MIR 36 146 -116 291 132 13 145 chr20 37657415 37657440 -29010565 - L2 LINE L2 0 3313 3286 1715 158 3 20 chr20 37657440 37657737 -29010268 + AluJo SINE Alu 1 292 -20 291 132 13 145 chr20 37657737 37657787 -29010218 - L2 LINE L2 -27 3286 3248 566 250 20 113 chr20 37657801 37657829 -29010176 - L2 LINE L2 -186 3127 3098 981 188 64 30 chr20 37657829 37658031 -29009974 - MER3 DNA MER1_type 0 209 1 566 250 20 113 chr20 37658031 37658302 -29009703 - L2 LINE L2 -215 3098 2856 421 200 12 0 chr20 37658345 37658425 -29009580 - AluJb SINE Alu -43 269 189 384 159 0 16 chr20 37658426 37658489 -29009516 + AluJ/FLAM SINE Alu 2 63 -239 883 276 43 8 chr20 37658489 37658859 -29009146 - L2 LINE L2 -536 2778 2396 363 301 54 18 chr20 37659915 37660081 -29007924 - L2 LINE L2 -259 3054 2883 241 282 13 0 chr20 37660106 37660184 -29007821 - L2 LINE L2 -557 2757 2679 1520 242 66 8 chr20 37661355 37661748 -29006257 + LTR16C LTR ERVL 76 491 0 511 257 99 29 chr20 37661932 37662103 -29005902 - LTR16C LTR ERVL -304 187 5 352 319 112 16 chr20 37663005 37663193 -29004812 - MIR SINE MIR -55 207 2 219 240 0 0 chr20 37663469 37663519 -29004486 + (TG)n Simple_repeat Simple_repeat 2 51 0 479 285 186 49 chr20 37664415 37664801 -29003204 + L2 LINE L2 2828 3266 -6 1989 120 0 36 chr20 37664857 37665166 -29002839 - AluSq SINE Alu -13 300 3 329 287 37 19 chr20 37665320 37665428 -29002577 - Charlie8 DNA MER1_type -2273 144 35 1691 126 12 0 chr20 37665915 37666162 -29001843 + AluSx SINE Alu 2 251 -61 191 36 36 0 chr20 37666198 37666226 -29001779 + (TAA)n Simple_repeat Simple_repeat 1 29 0 325 286 0 0 chr20 37666226 37666303 -29001702 - MIR SINE MIR -2 260 184 434 313 52 60 chr20 37666637 37666886 -29001119 - L2 LINE L2 -57 3215 2969 388 174 306 0 chr20 37667984 37668082 -28999923 + MIR SINE MIR 65 192 -70 1930 129 0 43 chr20 37668095 37668421 -28999584 + AluJo SINE Alu 1 312 0 22 0 0 0 chr20 37668510 37668532 -28999473 + AT_rich Low_complexity Low_complexity 1 22 0 201 216 0 59 chr20 37668714 37668765 -28999240 + L2 LINE L2 3224 3271 -1 379 288 27 18 chr20 37669511 37669622 -28998383 + MIR SINE MIR 32 143 -65 1731 156 60 26 chr20 37669635 37669987 -28998018 - THE1C LTR MaLR -11 364 1 498 264 218 34 chr20 37670072 37670421 -28997584 - L2 LINE L2 -7 3306 2894 287 233 97 19 chr20 37670883 37670986 -28997019 - L1MD3 LINE L1 -10 7985 7875 1161 290 75 21 chr20 37671011 37671172 -28996833 + L1ME3 LINE L1 5673 5824 -338 2007 130 17 0 chr20 37671172 37671465 -28996540 + AluSq SINE Alu 1 298 -15 1161 290 75 21 chr20 37671465 37671770 -28996235 + L1ME3 LINE L1 5824 6162 0 837 138 6 60 chr20 37671905 37671927 -28996078 - AluJo/FRAM SINE Alu -1 311 289 2033 105 0 43 chr20 37671927 37672251 -28995754 - AluSx SINE Alu -2 310 1 837 138 6 60 chr20 37672251 37672395 -28995610 - AluJo/FRAM SINE Alu -23 289 154 189 0 0 0 chr20 37672400 37672421 -28995584 + (T)n Simple_repeat Simple_repeat 1 21 0 27 0 0 0 chr20 37673142 37673169 -28994836 + GC_rich Low_complexity Low_complexity 1 27 0 2066 123 0 10 chr20 37674771 37675073 -28992932 - AluSc SINE Alu -9 300 2 961 128 0 0 chr20 37675094 37675227 -28992778 - AluSq/x SINE Alu -180 133 1 1161 132 6 0 chr20 37675281 37675455 -28992550 - L1PA10 LINE L1 0 6168 5994 673 291 78 50 chr20 37675465 37675784 -28992221 - L1ME3A LINE L1 -202 5968 5641 363 204 195 0 chr20 37675796 37675909 -28992096 - MIR SINE MIR -49 213 79 200 315 82 0 chr20 37676240 37676313 -28991692 - MIR SINE MIR -76 186 108 200 128 51 0 chr20 37676317 37676356 -28991649 + (TGGA)n Simple_repeat Simple_repeat 2 42 0 336 274 10 0 chr20 37676799 37676901 -28991104 + MIR SINE MIR 45 147 -115 4542 161 5 23 chr20 37676906 37677284 -28990721 + L1MB8 LINE L1 5412 5770 -408 1960 96 0 105 chr20 37677284 37677616 -28990389 + AluSc SINE Alu 3 299 -10 4542 161 5 23 chr20 37677616 37678015 -28989990 + L1MB8 LINE L1 5770 6175 -3 1841 140 38 0 chr20 37678199 37678491 -28989514 - AluSx SINE Alu -9 303 1 663 259 0 50 chr20 37678746 37678775 -28989230 - L1ME LINE L1 -301 5803 5774 2317 158 57 10 chr20 37678775 37679180 -28988825 - MSTB LTR MaLR -2 424 1 663 259 0 50 chr20 37679180 37679389 -28988616 - L1ME LINE L1 -330 5774 5577 1339 148 0 14 chr20 37679392 37679601 -28988404 - AluJo SINE Alu -25 287 82 467 297 58 82 chr20 37679700 37679870 -28988135 - L1ME LINE L1 -2201 5590 5430 2274 84 3 0 chr20 37679870 37680167 -28987838 - AluSp SINE Alu -15 298 1 467 297 58 82 chr20 37680167 37680339 -28987666 - L1ME LINE L1 -2361 5430 5256 738 325 87 57 chr20 37680368 37680944 -28987061 - L1ME LINE L1 -1015 5114 4522 1614 154 107 0 chr20 37680944 37681216 -28986789 - AluSx SINE Alu -11 301 1 2027 119 20 0 chr20 37681286 37681581 -28986424 + AluSx SINE Alu 1 301 -11 342 258 8 70 chr20 37681682 37681810 -28986195 + L1MC4a LINE L1 7686 7805 -3 1270 118 170 48 chr20 37681861 37682058 -28985947 + LTR51 LTR ERV1 26 266 -405 2123 123 0 3 chr20 37682058 37682368 -28985637 - AluSx SINE Alu -3 309 1 1270 118 170 48 chr20 37682368 37682440 -28985565 + LTR51 LTR ERV1 266 328 -343 2129 108 0 0 chr20 37682540 37682845 -28985160 + AluSc SINE Alu 1 305 -4 1889 142 48 24 chr20 37682845 37682926 -28985079 + LTR51 LTR ERV1 327 405 -266 1996 101 31 0 chr20 37682926 37683213 -28984792 + AluSx SINE Alu 1 296 -16 1889 142 48 24 chr20 37683213 37683468 -28984537 + LTR51 LTR ERV1 405 671 0 315 174 101 0 chr20 37683492 37683561 -28984444 - L1ME LINE L1 -1702 4427 4352 2176 118 0 33 chr20 37683579 37683910 -28984095 - MER1B DNA MER1_type 0 339 20 406 308 38 29 chr20 37683917 37684206 -28983799 - L1ME LINE L1 -1797 4332 4038 326 276 102 16 chr20 37684477 37684604 -28983401 + MIR SINE MIR 4 141 -121 2110 112 0 0 chr20 37684730 37685025 -28982980 - AluSq SINE Alu -18 295 1 189 299 156 0 chr20 37685269 37685346 -28982659 - L3 LINE CR1 -5 1572 1484 240 273 25 19 chr20 37685423 37685526 -28982479 + CT-rich Low_complexity Low_complexity 1 103 0 2106 171 33 71 chr20 37685661 37686181 -28981824 + Charlie4a DNA MER1_type 9 508 0 554 299 95 36 chr20 37686334 37686692 -28981313 + MLT1L LTR MaLR 227 605 -10 547 336 195 28 chr20 37686712 37686913 -28981092 - L3 LINE CR1 -222 1355 1189 1023 161 5 55 chr20 37686913 37687112 -28980893 - MER5A DNA MER1_type 0 189 1 2379 74 0 3 chr20 37687115 37687424 -28980581 + AluY SINE Alu 1 308 -3 547 336 195 28 chr20 37687424 37687998 -28980007 - L3 LINE CR1 -389 1188 446 534 284 57 17 chr20 37688460 37688768 -28979237 - L1ME LINE L1 -3699 2430 2112 1734 144 68 74 chr20 37688951 37689290 -28978715 + MER1B DNA MER1_type 1 337 0 1998 125 7 3 chr20 37689465 37689762 -28978243 - AluSq SINE Alu -15 298 1 536 294 63 32 chr20 37689875 37690460 -28977545 - L1ME LINE L1 -4501 1628 975 466 110 0 88 chr20 37690508 37690523 -28977482 - Alu SINE Alu 0 309 294 2264 90 0 3 chr20 37690523 37690833 -28977172 - AluY SINE Alu -2 309 1 466 110 0 88 chr20 37690833 37690908 -28977097 - Alu SINE Alu -15 294 227 2669 32 0 0 chr20 37690983 37691294 -28976711 + AluYb8 SINE Alu 2 312 -6 239 51 0 0 chr20 37691505 37691544 -28976461 - Alu SINE Alu 0 300 262 1367 193 37 0 chr20 37691847 37692142 -28975863 - L1ME1 LINE L1 -4 6162 5857 23 0 0 0 chr20 37692142 37692165 -28975840 + AT_rich Low_complexity Low_complexity 1 23 0 11901 143 31 20 chr20 37692165 37692794 -28975211 - L1PB1 LINE L1 -1 6866 6246 189 0 0 0 chr20 37692794 37692815 -28975190 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 11901 143 31 20 chr20 37692815 37694502 -28973503 - L1PB1 LINE L1 -621 6246 4580 2088 113 6 28 chr20 37694502 37694822 -28973183 - AluSq SINE Alu 0 313 1 2502 49 0 7 chr20 37694831 37695137 -28972868 - AluY SINE Alu -7 304 1 11901 143 31 20 chr20 37695137 37698410 -28969595 - L1PB1 LINE L1 -2294 4573 621 1234 143 5 0 chr20 37698398 37698594 -28969411 - L1PB1 LINE L1 -6663 200 4 * 1391 167 77 74 chr20 37698608 37698961 -28969044 - L1ME1 LINE L1 -295 5869 5516 444 280 0 8 chr20 37699053 37699171 -28968834 + L2 LINE L2 3195 3311 -2 921 249 73 38 chr20 37699317 37699630 -28968375 - MLT1J LTR MaLR -161 350 27 1028 225 78 9 chr20 37700184 37700415 -28967590 - LTR16C LTR ERVL 0 491 245 281 105 0 168 chr20 37700422 37700517 -28967488 - LTR19A LTR ERV1 -2 484 406 * 772 48 0 10 chr20 37700469 37700572 -28967433 + LTR19A LTR ERV1 385 486 0 573 276 69 30 chr20 37700575 37700807 -28967198 - LTR16C LTR ERVL -250 241 1 580 285 149 62 chr20 37700856 37701246 -28966759 + L2 LINE L2 2849 3272 0 260 248 124 35 chr20 37701892 37702005 -28966000 + L2 LINE L2 2927 3049 -223 180 315 164 0 chr20 37702153 37702226 -28965779 - MIR SINE MIR -98 164 80 188 167 28 0 chr20 37702383 37702419 -28965586 + L2 LINE L2 3268 3304 -9 1679 86 112 37 chr20 37702873 37703166 -28964839 - AluSg1 SINE Alu 0 309 1 2111 113 3 0 chr20 37703531 37703831 -28964174 - AluSq SINE Alu -12 301 1 771 226 153 22 chr20 37703835 37704109 -28963896 - L1MC4a LINE L1 -1921 5887 5578 1026 102 0 182 chr20 37704217 37704453 -28963552 - 7SK RNA RNA 0 193 1 2264 98 3 0 chr20 37704568 37704874 -28963131 - AluSp SINE Alu -6 307 1 657 197 0 0 chr20 37704926 37705043 -28962962 - FRAM SINE Alu -59 117 1 208 260 80 0 chr20 37705192 37705242 -28962763 + L2 LINE L2 3251 3304 -9 328 296 201 15 chr20 37705260 37705459 -28962546 - L1MC/D LINE L1 -2096 5712 5477 309 300 31 15 chr20 37705459 37705589 -28962416 - MIR3 SINE MIR -13 195 64 237 167 0 0 chr20 37706286 37706340 -28961665 + G-rich Low_complexity Low_complexity 1 54 0 227 270 79 34 chr20 37707043 37707132 -28960873 + MLT1K LTR MaLR 26 118 -470 2256 71 0 7 chr20 37707296 37707593 -28960412 + AluY SINE Alu 1 295 -16 1434 193 0 39 chr20 37707617 37707967 -28960038 + AluJo SINE Alu 1 312 0 381 149 35 58 chr20 37707972 37708059 -28959946 + MER58B DNA MER1_type 257 341 0 529 174 43 0 chr20 37708120 37708212 -28959793 + FLAM_C SINE Alu 27 122 -21 283 225 56 22 chr20 37708369 37708458 -28959547 + MLT1K LTR MaLR 489 580 -8 264 284 174 9 chr20 37708491 37708600 -28959405 + L2 LINE L2 2934 3060 -212 353 361 19 24 chr20 37708742 37708950 -28959055 - MIR SINE MIR -36 226 20 243 309 32 21 chr20 37709604 37709698 -28958307 + MIR3 SINE MIR 81 175 -33 1045 112 6 6 chr20 37710479 37710648 -28957357 - AluSg/x SINE Alu -3 309 141 1564 239 59 59 chr20 37710648 37711115 -28956890 + L1MC5 LINE L1 7060 7529 -432 2281 91 3 0 chr20 37711115 37711413 -28956592 - AluSp SINE Alu -14 299 1 1564 239 59 59 chr20 37711413 37711585 -28956420 + L1MC5 LINE L1 7528 7699 -262 304 234 50 92 chr20 37711592 37711733 -28956272 + L1MC5 LINE L1 7749 7883 -78 368 276 79 55 chr20 37713717 37713844 -28954161 + L2 LINE L2 3175 3304 -9 361 236 164 14 chr20 37714068 37714208 -28953797 + MIR SINE MIR 74 234 -28 2217 88 7 0 chr20 37714502 37714798 -28953207 - AluSx SINE Alu -14 298 1 264 319 50 8 chr20 37716988 37717107 -28950898 - L2 LINE L2 -9 3263 3140 256 222 63 0 chr20 37717206 37717269 -28950736 + MIR3 SINE MIR 123 189 -19 243 241 19 0 chr20 37719382 37719436 -28948569 - MIR SINE MIR -67 141 87 217 232 145 0 chr20 37720755 37720824 -28947181 + L2 LINE L2 3193 3271 -42 424 305 55 0 chr20 37720829 37720957 -28947048 - MIR SINE MIR -55 207 73 1940 147 0 3 chr20 37721250 37721549 -28946456 - AluJb SINE Alu -14 298 1 489 262 183 12 chr20 37722829 37723081 -28944924 - L2 LINE L2 -620 2694 2400 1799 121 0 18 chr20 37723136 37723409 -28944596 - AluSg SINE Alu -42 268 1 2016 112 0 14 chr20 37726905 37727200 -28940805 - AluSg SINE Alu -19 291 1 449 259 54 18 chr20 37727804 37727916 -28940089 + MIR SINE MIR 68 183 -79 866 299 96 54 chr20 37728394 37729247 -28938758 - L2 LINE L2 -4 3268 2351 360 264 89 136 chr20 37729796 37730179 -28937826 + L2 LINE L2 2949 3313 0 700 253 17 51 chr20 37730216 37730394 -28937611 - MIR SINE MIR -85 177 6 2171 109 7 0 chr20 37730687 37730989 -28937016 - AluSp SINE Alu -9 304 1 456 120 14 0 chr20 37731797 37731875 -28936130 + MSTD LTR MaLR 326 396 0 325 265 74 43 chr20 37731877 37731945 -28936060 + L1ME4a LINE L1 5748 5812 -309 1590 183 10 7 chr20 37731945 37732235 -28935770 - AluJo SINE Alu -21 291 1 325 265 74 43 chr20 37732235 37732328 -28935677 + L1ME4a LINE L1 5812 5914 -207 1910 103 4 0 chr20 37732480 37732741 -28935264 + AluSq SINE Alu 38 299 -14 211 250 43 22 chr20 37733026 37733118 -28934887 + MIR SINE MIR 106 199 -63 193 135 81 0 chr20 37733287 37733324 -28934681 + L3b LINE CR1 1283 1322 -261 219 167 0 0 chr20 37734130 37734172 -28933833 + A-rich Low_complexity Low_complexity 1 42 0 907 230 78 84 chr20 37734382 37734878 -28933127 + L1ME LINE L1 5279 5762 -359 503 306 45 63 chr20 37735517 37735850 -28932155 + L2 LINE L2 2882 3208 -105 301 289 86 0 chr20 37735959 37736087 -28931918 + L1MC/D LINE L1 5559 5697 -2111 1857 235 55 0 chr20 37736985 37737423 -28930582 + L1MC/D LINE L1 5361 5822 -1986 230 269 15 0 chr20 37738227 37738294 -28929711 + L2 LINE L2 3159 3226 -46 694 294 143 34 chr20 37738297 37738473 -28929532 + L2 LINE L2 2749 2904 -409 1800 156 26 10 chr20 37738473 37738775 -28929230 - AluJo SINE Alu -5 307 1 694 294 143 34 chr20 37738775 37739105 -28928900 + L2 LINE L2 2904 3313 0 2442 65 0 19 chr20 37739440 37739748 -28928257 - AluY SINE Alu -9 302 1 368 153 17 0 chr20 37739851 37739865 -28928140 + MER3 DNA MER1_type 33 47 -162 660 204 235 0 chr20 37739865 37740027 -28927978 - MER3 DNA MER1_type 0 209 10 318 356 26 9 chr20 37740152 37740267 -28927738 + MIR SINE MIR 57 173 -89 186 138 0 0 chr20 37740272 37740301 -28927704 + L2 LINE L2 3226 3254 -18 366 208 42 0 chr20 37742892 37742964 -28925041 - L2 LINE L2 0 3272 3198 947 208 30 39 chr20 37743213 37743444 -28924561 - L1ME3 LINE L1 -1 6161 5933 180 111 0 0 chr20 37743660 37743687 -28924318 + (CAGG)n Simple_repeat Simple_repeat 4 30 0 203 355 59 32 chr20 37743742 37743928 -28924077 - L2 LINE L2 -1904 1410 1220 229 260 0 0 chr20 37743931 37743981 -28924024 - MIR3 SINE MIR -6 202 153 26 0 0 0 chr20 37744607 37744633 -28923372 + AT_rich Low_complexity Low_complexity 1 26 0 354 338 41 5 chr20 37744926 37745146 -28922859 + L1MDa LINE L1 1671 1944 -957 254 345 31 93 chr20 37745686 37745944 -28922061 + L2 LINE L2 2620 2861 -453 297 309 180 0 chr20 37746055 37746194 -28921811 + L2 LINE L2 3137 3300 -13 288 0 0 0 chr20 37746377 37746409 -28921596 + (TG)n Simple_repeat Simple_repeat 1 32 0 525 257 139 66 chr20 37747092 37747839 -28920166 + L1ME LINE L1 676 1367 -4894 1808 173 7 3 chr20 37747839 37748134 -28919871 + AluJb SINE Alu 1 296 -16 525 257 139 66 chr20 37748134 37748657 -28919348 + L1ME LINE L1 1367 2091 -4170 1094 164 22 78 chr20 37748698 37748930 -28919075 - MER20 DNA MER1_type 0 219 1 2023 246 79 19 chr20 37748931 37749296 -28918709 + L1ME LINE L1 4512 4853 -1251 300 53 0 0 chr20 37749296 37749334 -28918671 + (TA)n Simple_repeat Simple_repeat 2 39 0 2023 246 79 19 chr20 37749334 37750125 -28917880 + L1ME LINE L1 4853 5742 -362 232 273 0 0 chr20 37750125 37750180 -28917825 + MARNA DNA Mariner 350 404 -182 618 239 230 25 chr20 37751166 37751484 -28916521 + L2 LINE L2 2928 3310 -3 264 287 228 15 chr20 37751822 37751958 -28916047 + MIR3 SINE MIR 23 187 -21 366 249 67 55 chr20 37752099 37752254 -28915751 - MIR SINE MIR -95 167 8 301 265 39 77 chr20 37752254 37752435 -28915570 + MER5B DNA MER1_type 1 174 -4 24 32 0 0 chr20 37753218 37753249 -28914756 + AT_rich Low_complexity Low_complexity 1 31 0 6881 173 129 45 chr20 37753266 37754266 -28913739 + L1MDa LINE L1 2 916 -5624 2204 120 0 0 chr20 37754266 37754567 -28913438 + AluSq SINE Alu 8 308 -5 6881 173 129 45 chr20 37754567 37755139 -28912866 + L1MDa LINE L1 916 1438 -5102 1881 156 7 0 chr20 37755139 37755428 -28912577 - AluSx SINE Alu -19 293 3 6881 173 129 45 chr20 37755428 37756110 -28911895 + L1MDa LINE L1 1438 2501 -4039 1401 208 72 39 chr20 37756111 37756379 -28911626 + MER2 DNA MER2_type 2 285 -60 2357 151 84 12 chr20 37756379 37756616 -28911389 - Tigger2a DNA MER2_type -2274 434 155 2251 108 7 0 chr20 37756616 37756923 -28911082 + AluSx SINE Alu 1 309 -3 2357 151 84 12 chr20 37756923 37757090 -28910915 - Tigger2a DNA MER2_type -2553 155 1 1401 208 72 39 chr20 37757090 37757153 -28910852 + MER2 DNA MER2_type 285 344 -1 4562 209 67 92 chr20 37757153 37757672 -28910333 + L1MDa LINE L1 2531 3061 -3479 1891 176 7 0 chr20 37757672 37757979 -28910026 - AluJb SINE Alu -3 309 1 4562 209 67 92 chr20 37757979 37758664 -28909341 + L1MDa LINE L1 3061 3762 -2778 2100 122 212 3 chr20 37758664 37759018 -28908987 + MSTC LTR MaLR 1 428 0 4562 209 67 92 chr20 37759018 37759501 -28908504 + L1MDa LINE L1 3762 4173 -2367 306 0 0 0 chr20 37759501 37759535 -28908470 + (CA)n Simple_repeat Simple_repeat 2 35 0 4562 209 67 92 chr20 37759535 37759657 -28908348 + L1MDa LINE L1 4173 4297 -2243 2213 271 127 8 chr20 37759657 37760685 -28907320 + L2 LINE L2 2094 3313 0 491 266 63 68 chr20 37760689 37760941 -28907064 + MIR SINE MIR 12 262 0 655 243 96 19 chr20 37761044 37761270 -28906735 + MIR SINE MIR 20 262 0 1334 152 160 0 chr20 37761561 37761817 -28906188 - AluJo SINE Alu -15 297 1 276 273 212 10 chr20 37763209 37763308 -28904697 - MIR SINE MIR -62 146 28 549 268 26 26 chr20 37763419 37763572 -28904433 + MIR SINE MIR 19 171 -91 321 330 0 0 chr20 37763553 37763656 -28904349 - MIR SINE MIR -4 258 156 * 189 0 0 0 chr20 37763695 37763716 -28904289 + (TCTCC)n Simple_repeat Simple_repeat 2 22 0 202 222 0 74 chr20 37763757 37763811 -28904194 - L2 LINE L2 -13 3259 3210 331 215 159 28 chr20 37763814 37763921 -28904084 + MIR SINE MIR 23 143 -119 224 280 152 53 chr20 37763921 37764053 -28903952 - MIR SINE MIR -4 258 114 187 327 0 19 chr20 37764166 37764218 -28903787 - L2 LINE L2 -86 3186 3136 2448 76 0 3 chr20 37764732 37765036 -28902969 - AluY SINE Alu -8 303 1 445 246 127 42 chr20 37765161 37765303 -28902702 - MIR SINE MIR -89 173 20 834 158 44 127 chr20 37765673 37765901 -28902104 + MER3 DNA MER1_type 1 209 0 1277 75 0 17 chr20 37767280 37767454 -28900551 - AluSg/x SINE Alu -13 299 129 2428 87 0 6 chr20 37767458 37767770 -28900235 - AluY SINE Alu -1 310 1 2308 98 3 0 chr20 37768380 37768675 -28899330 - AluSp SINE Alu -16 297 2 2327 111 0 0 chr20 37768708 37769006 -28898999 - AluSx SINE Alu -14 298 1 180 111 0 0 chr20 37769205 37769232 -28898773 + (T)n Simple_repeat Simple_repeat 1 27 0 412 275 44 31 chr20 37770662 37770822 -28897183 + MIR SINE MIR 64 225 -37 234 280 53 0 chr20 37770850 37770925 -28897080 + L2 LINE L2 3190 3268 -4 269 133 44 0 chr20 37770985 37771030 -28896975 + L2 LINE L2 3267 3313 0 1374 146 0 15 chr20 37771125 37771330 -28896675 + AluJo SINE Alu 85 286 -26 1354 286 167 47 chr20 37771986 37772971 -28895034 - L2 LINE L2 -5 3308 2207 2279 187 94 40 chr20 37772976 37773345 -28894660 - MER68 LTR ERV1 -2 560 152 2465 66 0 3 chr20 37773345 37773646 -28894359 - AluY SINE Alu -11 300 1 2279 187 94 40 chr20 37773646 37773806 -28894199 - MER68 LTR ERV1 -410 152 2 1175 255 109 31 chr20 37775403 37776084 -28891921 - L2 LINE L2 -63 3250 2516 240 367 20 20 chr20 37777758 37777856 -28890149 + MIR SINE MIR 30 127 -81 2182 99 7 0 chr20 37777927 37778220 -28889785 - AluSx SINE Alu -17 295 1 2363 107 0 0 chr20 37778332 37778640 -28889365 - AluSg1 SINE Alu -1 308 1 186 306 119 62 chr20 37778779 37778972 -28889033 + L2 LINE L2 2774 2977 -337 424 65 0 0 chr20 37780160 37780222 -28887783 + L1MA7 LINE L1 6230 6291 0 524 293 107 18 chr20 37780373 37780598 -28887407 - MIR SINE MIR -7 255 11 447 247 23 69 chr20 37780701 37780732 -28887273 + MIR SINE MIR 40 71 -191 2245 96 7 0 chr20 37780732 37781023 -28886982 - AluSp SINE Alu -20 293 1 447 247 23 69 chr20 37781023 37781165 -28886840 + MIR SINE MIR 71 205 -57 185 333 29 29 chr20 37781314 37781383 -28886622 + MIR SINE MIR 8 76 -186 729 86 0 0 chr20 37781623 37781716 -28886289 - HY3 scRNA scRNA -5 96 4 252 0 0 0 chr20 37781725 37781753 -28886252 + (T)n Simple_repeat Simple_repeat 1 28 0 31 0 0 0 chr20 37782192 37782223 -28885782 + AT_rich Low_complexity Low_complexity 1 31 0 1086 148 59 25 chr20 37782761 37782964 -28885041 - MER2 DNA MER2_type -135 210 1 188 319 42 69 chr20 37783102 37783318 -28884687 - L2 LINE L2 -819 2495 2286 184 269 75 81 chr20 37783465 37783625 -28884380 + MIR3 SINE MIR 44 202 -6 201 291 36 0 chr20 37783876 37783931 -28884074 - L2 LINE L2 -6 3307 3251 4944 181 64 21 chr20 37783977 37785013 -28882992 - Tigger6a DNA MER2_type -3 1080 1 2039 126 3 16 chr20 37785077 37785386 -28882619 + AluSq SINE Alu 1 305 -8 252 300 122 0 chr20 37785621 37785711 -28882294 + MIR SINE MIR 88 188 -74 21 71 0 0 chr20 37786003 37786045 -28881960 + AT_rich Low_complexity Low_complexity 1 42 0 254 238 25 62 chr20 37787135 37787215 -28880790 - MIR SINE MIR -166 96 20 1916 166 0 23 chr20 37787678 37787986 -28880019 - AluJo SINE Alu -11 301 1 24 0 0 0 chr20 37788113 37788137 -28879868 + AT_rich Low_complexity Low_complexity 1 24 0 319 258 72 10 chr20 37789126 37789223 -28878782 - MIR SINE MIR -114 148 46 532 259 45 32 chr20 37789422 37789669 -28878336 - L2 LINE L2 -179 3134 2885 332 260 123 23 chr20 37789693 37789912 -28878093 + L2 LINE L2 891 1131 -2183 852 194 35 20 chr20 37790093 37790294 -28877711 - L1MB2 LINE L1 -2 6169 5966 242 302 16 0 chr20 37790294 37790357 -28877648 + L2 LINE L2 1126 1189 -2125 993 256 217 2 chr20 37790374 37790807 -28877198 + L2 LINE L2 1492 2017 -1297 1185 178 63 44 chr20 37790807 37791077 -28876928 + MLT1D LTR MaLR 1 275 -230 411 162 0 0 chr20 37791093 37791161 -28876844 + MLT1D LTR MaLR 429 496 -9 1185 271 208 20 chr20 37791161 37791804 -28876201 + L2 LINE L2 2021 2784 -530 852 213 12 0 chr20 37791811 37791971 -28876034 - FRAM SINE Alu -15 161 1 821 256 104 30 chr20 37791993 37792396 -28875609 + L2 LINE L2 2827 3259 -54 276 288 192 23 chr20 37792439 37792793 -28875212 - L2 LINE L2 -1439 1875 1462 244 246 35 97 chr20 37793656 37793758 -28874247 - MER112 DNA MER1_type -5 255 159 1749 76 0 5 chr20 37793758 37793981 -28874024 + AluY SINE Alu 83 304 -7 244 246 35 97 chr20 37793981 37793992 -28874013 - MER112 DNA MER1_type -101 159 149 246 208 21 0 chr20 37794054 37794102 -28873903 - MER112 DNA MER1_type -210 50 2 1318 171 103 34 chr20 37794363 37794684 -28873321 + MER2 DNA MER2_type 2 344 0 2499 77 0 0 chr20 37795627 37795927 -28872078 - AluY SINE Alu -11 300 1 1565 144 4 32 chr20 37797374 37797624 -28870381 - AluSx SINE Alu -21 291 49 24 0 0 0 chr20 37797941 37797965 -28870040 + AT_rich Low_complexity Low_complexity 1 24 0 2131 109 31 3 chr20 37799711 37800004 -28868001 - AluSx SINE Alu -11 301 1 458 119 165 55 chr20 37800171 37800280 -28867725 - L1MB5 LINE L1 -1 6173 6053 4005 184 47 9 chr20 37800282 37801655 -28866350 - L1MB5 LINE L1 -283 5895 4479 213 257 100 0 chr20 37801919 37801989 -28866016 - MIR3 SINE MIR -24 184 108 197 105 0 26 chr20 37803116 37803154 -28864851 + (TTTTC)n Simple_repeat Simple_repeat 4 40 0 189 0 0 0 chr20 37803714 37803735 -28864270 + (TTTTTG)n Simple_repeat Simple_repeat 5 25 0 345 174 252 0 chr20 37803735 37803850 -28864155 - L1ME4a LINE L1 0 6121 5978 297 309 42 18 chr20 37805849 37805879 -28862126 + L2 LINE L2 2137 2165 -1149 2346 103 10 3 chr20 37805879 37806190 -28861815 - AluSq SINE Alu 0 313 1 297 309 42 18 chr20 37806190 37806327 -28861678 + L2 LINE L2 2165 2308 -1006 444 283 98 63 chr20 37806643 37806866 -28861139 + L2 LINE L2 2564 2809 -505 1924 135 35 3 chr20 37806866 37807155 -28860850 + AluJb SINE Alu 1 298 -14 444 283 98 63 chr20 37807155 37807330 -28860675 + L2 LINE L2 2809 2976 -338 8993 188 23 38 chr20 37808226 37809492 -28858513 - L1PA15 LINE L1 0 6165 4881 2067 128 3 3 chr20 37809492 37809797 -28858208 - AluSx SINE Alu -7 305 1 8993 188 23 38 chr20 37809797 37811326 -28856679 - L1PA15 LINE L1 -1284 4881 3359 2371 86 0 3 chr20 37811355 37811659 -28856346 - AluY SINE Alu -8 303 1 1745 134 98 0 chr20 37814812 37815087 -28852918 - AluJb SINE Alu -10 302 1 713 194 30 0 chr20 37815471 37815605 -28852400 - FLAM_C SINE Alu -3 140 3 2195 112 3 10 chr20 37815919 37816232 -28851773 - AluSq SINE Alu -2 311 1 191 225 0 0 chr20 37816359 37816399 -28851606 + MIR SINE MIR 37 76 -132 239 284 55 16 chr20 37816842 37816969 -28851036 - L2 LINE L2 -2 3270 3139 275 250 185 0 chr20 37817332 37817440 -28850565 - MIR3 SINE MIR -51 157 30 231 248 58 66 chr20 37821551 37821672 -28846333 - MIR SINE MIR -77 185 66 363 196 20 142 chr20 37822357 37822427 -28845578 + MIR3 SINE MIR 70 114 -94 1653 156 46 29 chr20 37822427 37822734 -28845271 - AluJo SINE Alu 0 312 1 363 196 20 142 chr20 37822734 37822811 -28845194 + MIR3 SINE MIR 114 199 -9 306 286 10 20 chr20 37823419 37823517 -28844488 + MIR3 SINE MIR 78 174 -34 3674 166 13 22 chr20 37825022 37825068 -28842937 - L1MB5 LINE L1 0 6174 6129 2438 79 0 16 chr20 37825068 37825384 -28842621 + AluSq SINE Alu 1 311 -2 207 0 0 0 chr20 37825384 37825407 -28842598 + (TA)n Simple_repeat Simple_repeat 2 24 0 3674 166 13 22 chr20 37825407 37826038 -28841967 - L1MB5 LINE L1 -43 6131 5502 1999 174 54 13 chr20 37826038 37826428 -28841577 - MLT2D LTR ERVL 0 414 9 1729 216 81 17 chr20 37826494 37826916 -28841089 - MLT1C LTR MaLR 0 467 19 1813 143 66 51 chr20 37826948 37827432 -28840573 - L1MB5 LINE L1 -709 5471 4975 1722 141 0 0 chr20 37827432 37827673 -28840332 - 7SLRNA srpRNA srpRNA -79 241 1 5475 227 74 71 chr20 37827817 37830003 -28838002 + L1MEc LINE L1 73 2251 -3964 2324 98 0 7 chr20 37830003 37830308 -28837697 - AluSc SINE Alu -6 303 1 5475 227 74 71 chr20 37830308 37830670 -28837335 + L1MEc LINE L1 2251 2610 -3605 1447 197 43 50 chr20 37830670 37831046 -28836959 + MLT1A2 LTR MaLR 1 373 -1 5475 227 74 71 chr20 37831046 37831333 -28836672 + L1MEc LINE L1 2610 2880 -3335 2212 111 7 0 chr20 37831333 37831622 -28836383 + AluSx SINE Alu 1 291 -21 5475 227 74 71 chr20 37831622 37831786 -28836219 + L1MEc LINE L1 2880 3042 -3173 4955 189 41 71 chr20 37831789 37831910 -28836095 + L1M4 LINE L1 3960 4083 -2063 715 162 7 29 chr20 37831910 37832046 -28835959 + FLAM_C SINE Alu 1 133 0 4955 189 41 71 chr20 37832046 37832065 -28835940 + L1M4 LINE L1 4083 4101 -2045 2448 69 0 34 chr20 37832065 37832385 -28835620 + AluY SINE Alu 3 311 0 4955 189 41 71 chr20 37832385 37832900 -28835105 + L1M4 LINE L1 4101 4630 -1516 2379 106 0 0 chr20 37832900 37833201 -28834804 + AluSx SINE Alu 1 301 -11 4955 189 41 71 chr20 37833201 37833862 -28834143 + L1M4 LINE L1 4630 5238 -908 288 275 87 27 chr20 37833957 37834106 -28833899 - MIR SINE MIR -72 190 33 188 281 31 0 chr20 37834165 37834229 -28833776 - MIR SINE MIR -62 146 81 183 179 0 0 chr20 37834494 37834533 -28833472 + MIR SINE MIR 114 152 -56 186 43 0 0 chr20 37834686 37834709 -28833296 + (TC)n Simple_repeat Simple_repeat 2 24 0 2243 105 0 0 chr20 37834741 37835026 -28832979 + AluSq SINE Alu 1 285 -28 23 0 0 0 chr20 37835032 37835055 -28832950 + AT_rich Low_complexity Low_complexity 1 23 0 611 158 0 0 chr20 37835116 37835211 -28832794 - AluJo SINE Alu -8 304 210 1083 148 0 6 chr20 37835211 37835373 -28832632 - AluJo SINE Alu -151 161 1 779 201 0 21 chr20 37835476 37835620 -28832385 + MER58A DNA MER1_type 45 185 -39 328 248 40 20 chr20 37835637 37835738 -28832267 - MER70B LTR ERVL -17 561 459 7703 26 9 0 chr20 37835851 37836877 -28831128 + L1PA4 LINE L1 5120 6153 -2 2317 78 0 36 chr20 37837070 37837379 -28830626 + AluSx SINE Alu 1 298 -14 259 160 0 20 chr20 37837537 37837587 -28830418 + MER58A DNA MER1_type 174 222 -2 181 313 0 0 chr20 37837936 37837984 -28830021 + MIR SINE MIR 58 105 -103 450 307 45 17 chr20 37838093 37838272 -28829733 + MIR SINE MIR 15 198 -64 203 297 20 50 chr20 37838700 37838801 -28829204 + L3 LINE CR1 1463 1560 -17 238 232 179 11 chr20 37839437 37839532 -28828473 + L3 LINE CR1 1400 1510 -67 581 252 97 34 chr20 37839546 37839784 -28828221 - MER102a DNA MER1_type -1 329 77 399 247 107 7 chr20 37839987 37840137 -28827868 + MIR3 SINE MIR 30 194 -14 1874 171 0 34 chr20 37840227 37840549 -28827456 - AluJo SINE Alu -1 311 1 394 250 50 29 chr20 37840770 37840910 -28827095 + MIR3 SINE MIR 60 202 -6 677 106 23 15 chr20 37840989 37841121 -28826884 + CT-rich Low_complexity Low_complexity 2 134 0 361 153 85 0 chr20 37841122 37841181 -28826824 - FRAM SINE Alu -29 137 74 586 233 238 0 chr20 37841208 37841414 -28826591 + MLT1F1 LTR MaLR 313 567 0 241 304 25 13 chr20 37841915 37841994 -28826011 - MIR SINE MIR -70 192 113 295 307 8 31 chr20 37842287 37842414 -28825591 + MIR SINE MIR 122 245 -17 201 39 0 0 chr20 37842414 37842440 -28825565 + (TGG)n Simple_repeat Simple_repeat 3 28 0 216 356 45 40 chr20 37842871 37843073 -28824932 - L3 LINE CR1 -51 1526 1324 * 437 331 144 3 chr20 37843061 37843345 -28824660 - L2 LINE L2 0 3313 2990 1033 256 118 42 chr20 37843345 37843770 -28824235 + MLT1G1 LTR MaLR 1 457 -138 2271 114 0 0 chr20 37843833 37844130 -28823875 - AluSx SINE Alu -14 298 2 357 315 199 8 chr20 37844200 37844441 -28823564 - L2 LINE L2 -371 2943 2657 739 179 0 14 chr20 37844487 37844627 -28823378 - FRAM SINE Alu -7 169 32 729 289 81 3 chr20 37844629 37844986 -28823019 - L1MDa LINE L1 -2502 3713 3329 335 343 0 56 chr20 37845008 37845151 -28822854 - L1MDa LINE L1 -3965 2250 2116 * 375 349 97 25 chr20 37845146 37845467 -28822538 - L1MDa LINE L1 -4190 2206 1863 951 313 46 11 chr20 37845602 37846250 -28821755 - L1MDa LINE L1 -4723 1673 1003 595 119 10 0 chr20 37846259 37846360 -28821645 - L1MB3 LINE L1 -7 6176 6075 223 401 80 7 chr20 37846736 37846873 -28821132 - L2 LINE L2 -8 3264 3118 180 300 0 0 chr20 37846886 37846936 -28821069 + L2 LINE L2 3263 3312 -1 4026 172 43 56 chr20 37847125 37848013 -28819992 - L1MB7 LINE L1 -1 6183 5302 1786 142 14 25 chr20 37848013 37848294 -28819711 - AluJo SINE Alu -32 280 3 4026 172 43 56 chr20 37848294 37848501 -28819504 - L1MB7 LINE L1 -882 5302 5094 375 220 91 6 chr20 37848502 37848623 -28819382 + L1ME3A LINE L1 6042 6164 0 240 337 0 12 chr20 37848630 37848716 -28819289 + MIR SINE MIR 145 229 -33 2209 113 7 3 chr20 37848763 37849072 -28818933 - AluSg SINE Alu 0 310 1 319 247 21 21 chr20 37849082 37849175 -28818830 + MIR SINE MIR 52 144 -118 1975 248 29 52 chr20 37849785 37849896 -28818109 - L1ME3A LINE L1 -9 6161 6049 2196 125 23 0 chr20 37849896 37850201 -28817804 + AluSx SINE Alu 1 312 0 1975 248 29 52 chr20 37850201 37850368 -28817637 - L1ME3A LINE L1 -121 6049 5880 2246 92 7 3 chr20 37850368 37850662 -28817343 - AluSx SINE Alu -16 296 2 1975 248 29 52 chr20 37850662 37851068 -28816937 - L1ME3A LINE L1 -290 5880 5492 262 286 13 13 chr20 37851137 37851214 -28816791 + (TATG)n Simple_repeat Simple_repeat 2 78 0 317 274 4 7 chr20 37851344 37851480 -28816525 - L1MC4 LINE L1 -1329 6993 1996 2334 131 0 0 chr20 37851568 37851880 -28816125 + AluSx SINE Alu 1 312 0 306 238 59 20 chr20 37852106 37852207 -28815798 - MER69 DNA AcHobo -2421 105 1 206 316 51 13 chr20 37852374 37852453 -28815552 + L2 LINE L2 2989 3070 -243 265 304 37 43 chr20 37852490 37852651 -28815354 + MIR SINE MIR 2 161 -101 300 255 59 49 chr20 37852673 37852775 -28815230 + L1MCa LINE L1 1963 2065 -4361 * 316 320 36 40 chr20 37852715 37852937 -28815068 - L1MC4 LINE L1 -4362 2064 1844 328 105 112 0 chr20 37852939 37853091 -28814914 + (TA)n Simple_repeat Simple_repeat 1 169 0 367 302 68 52 chr20 37853095 37853537 -28814468 - L1MCa LINE L1 -4212 2214 1933 2013 131 0 7 chr20 37853573 37853855 -28814150 - AluJb SINE Alu -30 282 3 211 333 0 43 chr20 37853868 37853961 -28814044 - MIR SINE MIR -56 206 118 375 269 50 19 chr20 37854132 37854292 -28813713 - L1ME3A LINE L1 0 6170 6006 677 195 0 0 chr20 37854917 37855035 -28812970 + MIR SINE MIR 35 152 -110 539 288 30 30 chr20 37855095 37855293 -28812712 - MIR SINE MIR -31 231 34 269 392 53 18 chr20 37855658 37855885 -28812120 - L2 LINE L2 -95 3177 2943 251 227 71 58 chr20 37856134 37856288 -28811717 + LTR33A LTR ERVL 368 523 0 1481 149 30 44 chr20 37856532 37856859 -28811146 + MER33 DNA MER1_type 1 322 -2 478 345 31 23 chr20 37857046 37857310 -28810695 - L2 LINE L2 -208 3064 2783 328 231 121 40 chr20 37858133 37858306 -28809699 - MIR3 SINE MIR -5 203 17 311 238 0 0 chr20 37859599 37859679 -28808326 + L1ME3A LINE L1 6091 6170 0 200 100 0 0 chr20 37860338 37860368 -28807637 + MIR SINE MIR 111 140 -122 462 235 190 11 chr20 37860475 37860654 -28807351 + MIR SINE MIR 20 230 -32 604 290 149 0 chr20 37860768 37860982 -28807023 - MIR SINE MIR 0 262 17 235 258 32 21 chr20 37861542 37861635 -28806370 - MIR SINE MIR -141 121 28 288 250 29 57 chr20 37861646 37861786 -28806219 + MIR3 SINE MIR 1 136 -72 443 296 64 25 chr20 37861917 37862120 -28805885 - MIR SINE MIR -24 238 28 210 222 19 39 chr20 37862245 37862343 -28805662 + MIR SINE MIR 40 137 -71 2248 117 0 22 chr20 37862613 37862930 -28805075 + AluJb SINE Alu 1 310 -2 608 288 82 11 chr20 37862938 37863205 -28804800 + MER113 DNA MER1_type? 236 521 0 422 101 0 14 chr20 37864308 37864377 -28803628 + L1PB4 LINE L1 6076 6143 -13 348 24 0 0 chr20 37864377 37864418 -28803587 + (CA)n Simple_repeat Simple_repeat 2 42 0 192 299 48 61 chr20 37864421 37864568 -28803437 - MIR3 SINE MIR -22 186 42 277 360 16 32 chr20 37864845 37865034 -28802971 - MIR SINE MIR -60 202 17 619 266 42 42 chr20 37866101 37866175 -28801830 - MER3 DNA MER1_type 0 209 136 1828 108 128 0 chr20 37866175 37866462 -28801543 + AluSx SINE Alu 1 319 0 619 266 42 42 chr20 37866462 37866578 -28801427 - MER3 DNA MER1_type -72 137 18 685 278 6 6 chr20 37866809 37866989 -28801016 + MIR SINE MIR 72 251 -11 285 214 0 14 chr20 37867527 37867597 -28800408 + L2 LINE L2 2986 3054 -218 228 260 192 0 chr20 37867640 37867713 -28800292 + L2 LINE L2 3158 3244 -28 439 254 150 0 chr20 37868784 37868957 -28799048 + MIR SINE MIR 16 214 -48 1239 229 91 26 chr20 37869417 37869837 -28798168 + Charlie4a DNA MER1_type 22 468 -40 379 284 72 67 chr20 37869872 37870080 -28797925 + L1ME4a LINE L1 5897 6105 -16 300 252 58 65 chr20 37870884 37871023 -28796982 + L2 LINE L2 2968 3105 -167 308 248 211 53 chr20 37871323 37871403 -28796602 + L2 LINE L2 2624 2690 -624 2285 86 24 10 chr20 37871403 37871694 -28796311 + AluSx SINE Alu 1 295 -17 308 248 211 53 chr20 37871694 37871912 -28796093 + L2 LINE L2 2690 2969 -345 195 235 0 0 chr20 37872097 37872148 -28795857 + GA-rich Low_complexity Low_complexity 3 53 0 236 240 5 5 chr20 37872231 37872316 -28795689 + MIR SINE MIR 63 131 -77 439 275 58 0 chr20 37873177 37873315 -28794690 + MIR SINE MIR 47 192 -70 643 237 84 16 chr20 37873534 37873724 -28794281 - MIR SINE MIR -35 227 25 1070 161 0 6 chr20 37874384 37874545 -28793460 - AluJb SINE Alu -18 294 135 891 243 11 0 chr20 37874545 37874730 -28793275 - MIR SINE MIR -55 207 21 1564 148 19 34 chr20 37874735 37874999 -28793006 - AluJo SINE Alu -5 307 48 499 262 131 11 chr20 37875216 37875407 -28792598 - MIR SINE MIR -2 260 47 539 291 120 11 chr20 37876231 37876601 -28791404 + L2 LINE L2 2753 3216 -97 207 0 0 0 chr20 37876601 37876624 -28791381 + (TCCCC)n Simple_repeat Simple_repeat 4 26 0 539 291 120 11 chr20 37876624 37876734 -28791271 + L2 LINE L2 3216 3313 0 397 239 284 17 chr20 37877537 37877838 -28790167 + L2 LINE L2 2698 3061 -252 412 292 74 47 chr20 37878021 37878278 -28789727 + L2 LINE L2 2827 3090 -182 2672 49 0 7 chr20 37878368 37878674 -28789331 + AluY SINE Alu 1 304 -7 473 197 61 127 chr20 37879158 37879390 -28788615 + MLT1H LTR MaLR 255 549 0 453 214 0 0 chr20 37879397 37879481 -28788524 + MER5A DNA MER1_type 1 84 -105 491 314 0 0 chr20 37880233 37880386 -28787619 - MIR SINE MIR -12 250 98 255 193 195 33 chr20 37880394 37880491 -28787514 + MIR SINE MIR 19 116 -92 279 335 48 44 chr20 37880645 37880896 -28787109 - L2 LINE L2 -189 3083 2832 1088 211 46 11 chr20 37880956 37881217 -28786788 + ORSL DNA AcHobo 3 272 -3 2457 91 0 0 chr20 37882215 37882522 -28785483 + AluSx SINE Alu 1 307 -5 261 314 19 0 chr20 37882523 37882628 -28785377 + L1MC4a LINE L1 5818 5924 -1884 1892 143 4 7 chr20 37882800 37883073 -28784932 - AluJb SINE Alu -23 289 18 195 359 51 0 chr20 37883373 37883451 -28784554 - MIR3 SINE MIR -21 187 106 294 300 50 0 chr20 37883568 37883668 -28784337 + MIR SINE MIR 97 201 -61 2202 121 0 0 chr20 37883796 37884117 -28783888 + AluSq SINE Alu 1 313 0 1809 177 0 19 chr20 37884309 37884620 -28783385 - AluJo SINE Alu -7 305 1 395 260 47 24 chr20 37885095 37885275 -28782730 + MIR3 SINE MIR 3 184 -54 245 323 61 0 chr20 37885763 37885862 -28782143 - MIR SINE MIR -72 136 32 197 347 41 10 chr20 37886398 37886496 -28781509 + MIR3 SINE MIR 61 161 -47 * 766 283 38 13 chr20 37886472 37886709 -28781296 + MIR SINE MIR 20 262 0 255 350 0 0 chr20 37886727 37886824 -28781181 + MIR SINE MIR 162 258 -4 216 355 0 0 chr20 37886872 37886965 -28781040 - MIR3 SINE MIR -9 199 107 477 291 8 0 chr20 37886969 37887096 -28780909 - MER94 DNA DNA 0 134 7 218 196 36 0 chr20 37887712 37887768 -28780237 + MIR SINE MIR 77 134 -74 204 153 34 68 chr20 37888180 37888204 -28779801 + GA-rich Low_complexity Low_complexity 1 24 -33 1847 121 0 7 chr20 37888204 37888502 -28779503 + L1PA13 LINE L1 5867 6162 -1 204 153 34 68 chr20 37888502 37888536 -28779469 + GA-rich Low_complexity Low_complexity 24 57 0 396 228 62 62 chr20 37888643 37888794 -28779211 + MIR SINE MIR 10 170 -38 435 234 27 36 chr20 37889488 37889599 -28778406 - MIR SINE MIR -69 139 30 1410 151 140 37 chr20 37889805 37890077 -28777928 - AluSp SINE Alu -13 300 1 286 204 76 76 chr20 37890144 37890276 -28777729 + MIR3 SINE MIR 40 171 -37 225 0 0 0 chr20 37890346 37890371 -28777634 + (TGG)n Simple_repeat Simple_repeat 3 27 0 1358 146 65 121 chr20 37890761 37891084 -28776921 - AluJo SINE Alu -7 305 1 480 283 0 0 chr20 37891166 37891272 -28776733 + MIR SINE MIR 154 259 -3 983 234 165 36 chr20 37891343 37891865 -28776140 + L1MC5 LINE L1 7328 7916 -45 187 256 116 70 chr20 37891906 37892035 -28775970 + MIR3 SINE MIR 45 179 -29 265 190 127 38 chr20 37892262 37892341 -28775664 - MIR SINE MIR -82 126 41 353 292 130 47 chr20 37892373 37892565 -28775440 - MIR SINE MIR -50 212 5 29 0 0 0 chr20 37894281 37894310 -28773695 + GC_rich Low_complexity Low_complexity 1 29 0 399 119 0 0 chr20 37894644 37894711 -28773294 + (CA)n Simple_repeat Simple_repeat 2 68 0 335 218 10 0 chr20 37895184 37895285 -28772720 + (TCCA)n Simple_repeat Simple_repeat 2 103 0 505 249 158 0 chr20 37895907 37896084 -28771921 + MIR SINE MIR 46 250 -12 1900 147 10 7 chr20 37896318 37896611 -28771394 - AluJb SINE Alu -18 294 1 180 276 17 35 chr20 37896638 37896696 -28771309 + L2 LINE L2 3206 3262 -10 742 275 22 26 chr20 37896783 37897015 -28770990 + MIR SINE MIR 27 258 -4 270 222 203 46 chr20 37897209 37897366 -28770639 + MIR3 SINE MIR 10 185 -54 589 226 151 0 chr20 37897492 37897651 -28770354 + MIR SINE MIR 69 251 -11 374 243 180 0 chr20 37897940 37898051 -28769954 - MIR SINE MIR -72 190 60 181 321 18 0 chr20 37898294 37898350 -28769655 - MIR SINE MIR -126 136 80 186 218 81 81 chr20 37898867 37898954 -28769051 + MIR SINE MIR 59 145 -63 249 288 186 18 chr20 37898984 37899207 -28768798 + L2 LINE L2 2800 3058 -214 243 253 120 0 chr20 37899272 37899347 -28768658 + L2 LINE L2 3230 3313 0 194 280 15 0 chr20 37899644 37899722 -28768283 - MIR SINE MIR -84 124 45 596 250 7 28 chr20 37900712 37900856 -28767149 + MIR SINE MIR 46 186 -76 1888 180 10 38 chr20 37900900 37901295 -28766710 + L1MB7 LINE L1 5801 6184 0 351 300 75 20 chr20 37901436 37901636 -28766369 + L1MC4a LINE L1 5701 5911 -1897 274 218 0 0 chr20 37902262 37902330 -28765675 - MIR SINE MIR -82 126 58 2401 197 26 2 chr20 37903254 37903756 -28764249 - L1ME1 LINE L1 -21 6145 5632 424 289 35 0 chr20 37903944 37904058 -28763947 - MIR SINE MIR -70 192 75 293 188 14 58 chr20 37904211 37904280 -28763725 + MIR3 SINE MIR 111 176 -32 493 286 117 15 chr20 37904871 37905077 -28762928 + MIR SINE MIR 36 262 0 2442 99 0 6 chr20 37905245 37905559 -28762446 - AluSx SINE Alu 0 312 1 2437 91 0 0 chr20 37905704 37906001 -28762004 + AluY SINE Alu 1 297 -14 2014 241 147 16 chr20 37906506 37907202 -28760803 + L2 LINE L2 2187 2973 -341 261 208 116 24 chr20 37907330 37907422 -28760583 + MIR SINE MIR 80 176 -32 318 279 48 10 chr20 37907458 37907562 -28760443 - MIR3 SINE MIR -37 171 64 1680 186 0 21 chr20 37907732 37908068 -28759937 + AluJb SINE Alu 1 330 0 232 350 57 43 chr20 37908112 37908252 -28759753 - L2 LINE L2 -172 3100 2959 2302 162 16 46 chr20 37908255 37908354 -28759651 + MSTA LTR MaLR 1 101 -327 2874 80 0 0 chr20 37908354 37908719 -28759286 + L1PA8 LINE L1 5795 6159 -13 2302 162 16 46 chr20 37908719 37909058 -28758947 + MSTA LTR MaLR 101 426 -2 197 277 0 0 chr20 37909249 37909296 -28758709 - L2 LINE L2 -553 2761 2715 219 227 100 64 chr20 37909333 37909349 -28758656 - MIR3 SINE MIR -2 206 192 2195 110 23 7 chr20 37909349 37909649 -28758356 - AluSx SINE Alu -7 305 1 219 227 100 64 chr20 37909649 37909742 -28758263 - MIR3 SINE MIR -16 192 93 272 224 40 14 chr20 37909964 37910051 -28757954 + MIR SINE MIR 74 163 -45 343 223 41 8 chr20 37910887 37911008 -28756997 - L1ME4a LINE L1 -20 6101 5977 205 339 17 0 chr20 37911087 37911146 -28756859 - L2 LINE L2 0 3313 3254 375 291 144 14 chr20 37911165 37911368 -28756637 - L1ME4a LINE L1 -224 5897 5705 230 154 26 0 chr20 37911462 37911501 -28756504 + MLT1J LTR MaLR 95 134 -377 2551 180 35 23 chr20 37912039 37912470 -28755535 - L1MB8 LINE L1 -2 6176 5736 1844 151 49 0 chr20 37912470 37912634 -28755371 - AluJo SINE Alu -14 298 113 186 43 0 0 chr20 37912634 37912657 -28755348 + (TTTTA)n Simple_repeat Simple_repeat 4 26 0 1844 151 49 0 chr20 37912657 37912776 -28755229 - AluJo SINE Alu -199 113 1 2551 180 35 23 chr20 37912776 37912866 -28755139 - L1MB8 LINE L1 -442 5736 5649 2287 96 0 34 chr20 37913494 37913817 -28754188 + AluSx SINE Alu 1 312 0 5043 186 70 37 chr20 37913912 37914266 -28753739 - L1MB8 LINE L1 -523 5661 5320 2208 127 0 0 chr20 37914266 37914565 -28753440 - AluSx SINE Alu -13 299 1 5043 186 70 37 chr20 37914565 37915818 -28752187 - L1MB8 LINE L1 -864 5320 3987 212 225 0 0 chr20 37915996 37916036 -28751969 + G-rich Low_complexity Low_complexity 1 40 0 1937 108 65 11 chr20 37916135 37916413 -28751592 + AluSx SINE Alu 1 293 -19 1039 174 85 126 chr20 37916511 37916885 -28751120 + MLT2D LTR ERVL 1 472 -48 339 25 0 0 chr20 37916885 37916925 -28751080 + (CA)n Simple_repeat Simple_repeat 2 41 0 1039 174 85 126 chr20 37916925 37916965 -28751040 + MLT2D LTR ERVL 472 512 -8 1559 258 55 35 chr20 37916973 37917417 -28750588 - L1ME3A LINE L1 -27 6143 5686 1995 136 3 7 chr20 37917417 37917719 -28750286 - AluJb SINE Alu -11 301 1 1559 258 55 35 chr20 37917719 37917782 -28750223 - L1ME3A LINE L1 -484 5686 5626 537 182 74 0 chr20 37917869 37917990 -28750015 - MER20B DNA MER1_type -127 656 527 516 273 85 18 chr20 37918939 37919104 -28748901 - MER20B DNA MER1_type -581 202 27 1686 161 0 65 chr20 37919207 37919530 -28748475 - AluJo SINE Alu -10 302 1 609 333 81 4 chr20 37919530 37919776 -28748229 - L3 LINE CR1 -762 815 551 265 313 0 0 chr20 37919849 37919929 -28748076 - MIR SINE MIR -70 138 59 198 276 12 37 chr20 37920268 37920354 -28747651 + MIR SINE MIR 104 183 -61 1769 251 71 15 chr20 37920363 37920881 -28747124 - L2 LINE L2 -492 2822 2276 736 144 0 0 chr20 37921179 37921290 -28746715 + FRAM SINE Alu 60 170 -6 228 286 154 0 chr20 37921399 37921490 -28746515 + MIR SINE MIR 41 145 -63 256 297 22 11 chr20 37921639 37921730 -28746275 - MIR SINE MIR -77 131 40 346 209 95 115 chr20 37922024 37922115 -28745890 - MIR SINE MIR -14 248 160 2266 117 0 0 chr20 37922115 37922414 -28745591 + AluSg SINE Alu 5 303 -7 346 209 95 115 chr20 37922414 37922470 -28745535 - MIR SINE MIR -102 160 104 396 285 25 32 chr20 37923094 37923220 -28744785 - MIR3 SINE MIR -54 154 29 200 209 0 0 chr20 37923405 37923448 -28744557 + A-rich Low_complexity Low_complexity 2 44 0 516 68 0 0 chr20 37923536 37923609 -28744396 + (TCCA)n Simple_repeat Simple_repeat 3 75 0 606 328 86 55 chr20 37923609 37924006 -28743999 - L2 LINE L2 -15 3257 2849 222 280 27 27 chr20 37924395 37924470 -28743535 - MIR SINE MIR -141 121 47 378 205 47 8 chr20 37924524 37924656 -28743349 - LTR16C LTR ERVL 0 474 353 190 278 28 14 chr20 37925037 37925109 -28742896 + L2 LINE L2 2883 2955 -317 * 473 309 45 74 chr20 37925104 37925373 -28742632 - L2 LINE L2 -2 3270 3010 219 284 148 0 chr20 37925487 37925575 -28742430 + MIR3 SINE MIR 91 191 -17 1624 225 56 84 chr20 37925992 37926490 -28741515 - L2 LINE L2 -1 3312 2829 263 154 15 0 chr20 37926536 37926601 -28741404 + GA-rich Low_complexity Low_complexity 1 66 0 197 286 0 0 chr20 37926966 37927008 -28740997 - MIR SINE MIR -58 150 109 732 200 178 0 chr20 37927133 37927313 -28740692 - MER58A DNA MER1_type -6 218 7 288 254 45 0 chr20 37927374 37927441 -28740564 + MIR SINE MIR 81 150 -58 1695 205 131 23 chr20 37927587 37928064 -28739941 - MLT1G1 LTR MaLR -57 485 1 2305 112 0 7 chr20 37928318 37928623 -28739382 + AluSg SINE Alu 1 303 -7 255 263 42 11 chr20 37929060 37929155 -28738850 - MIR SINE MIR -74 134 37 2162 109 0 3 chr20 37929220 37929541 -28738464 + AluSx SINE Alu 1 320 0 1824 114 76 8 chr20 37929999 37930263 -28737742 - AluSx SINE Alu -30 282 1 235 182 0 23 chr20 37930264 37930308 -28737697 - MIR SINE MIR -112 150 108 396 279 98 0 chr20 37930627 37930749 -28737256 + MER94 DNA DNA 1 134 0 539 316 75 22 chr20 37930912 37931140 -28736865 + MIR SINE MIR 23 262 0 214 319 35 26 chr20 37932020 37932136 -28735869 - L2 LINE L2 -266 3006 2890 427 273 175 0 chr20 37932673 37932816 -28735189 - MER117 DNA MER1_type 0 197 30 347 309 194 0 chr20 37932827 37932992 -28735013 - L2 LINE L2 0 3313 3117 1719 184 5 27 chr20 37933226 37933596 -28734409 - L1MB8 LINE L1 -1 6177 5816 6918 202 25 36 chr20 37933597 37934764 -28733241 - L1MB7 LINE L1 -10 6174 4997 2163 96 27 0 chr20 37934764 37934950 -28733055 - AluY SINE Alu 0 311 120 192 40 0 0 chr20 37934950 37934975 -28733030 + (TTTTG)n Simple_repeat Simple_repeat 5 29 0 2163 96 27 0 chr20 37934975 37935099 -28732906 - AluY SINE Alu -191 120 1 6918 202 25 36 chr20 37935099 37936526 -28731479 - L1MB7 LINE L1 -1187 4997 3608 2648 186 14 16 chr20 37936512 37937086 -28730919 - L1MB8 LINE L1 -356 5828 5256 * 480 290 67 10 chr20 37937199 37937392 -28730613 + LTR16A1 LTR ERVL 252 455 -2 526 301 146 23 chr20 37937396 37937881 -28730124 - L2 LINE L2 -397 2917 2373 236 314 48 9 chr20 37937918 37938023 -28729982 - MIR3 SINE MIR -49 159 51 478 211 37 107 chr20 37938328 37938551 -28729454 + MIR SINE MIR 26 226 -36 415 294 38 25 chr20 37938827 37938987 -28729018 - MIR3 SINE MIR -46 162 1 491 299 56 51 chr20 37939273 37939487 -28728518 + MIR SINE MIR 48 262 0 345 314 81 0 chr20 37940881 37941005 -28727000 + LTR16C LTR ERVL 211 344 -147 1421 157 67 26 chr20 37941010 37941277 -28726728 + AluJo SINE Alu 5 282 -30 746 120 0 19 chr20 37941307 37941415 -28726590 + FLAM_C SINE Alu 25 130 -13 270 269 76 17 chr20 37941462 37941581 -28726424 + LTR16C LTR ERVL 363 488 -3 2102 119 3 0 chr20 37942928 37943223 -28724782 - AluSx SINE Alu -16 296 1 347 223 9 11 chr20 37943261 37943350 -28724655 + MIR3 SINE MIR 102 192 -16 479 220 10 0 chr20 37943476 37943576 -28724429 - MIR SINE MIR -63 145 45 320 290 52 39 chr20 37944116 37944271 -28723734 - MIR3 SINE MIR -22 186 30 461 324 68 40 chr20 37944342 37944750 -28723255 - L2 LINE L2 -24 3248 2840 718 233 106 5 chr20 37944897 37945086 -28722919 + MIR SINE MIR 34 241 -21 380 243 53 15 chr20 37945652 37945800 -28722205 + MIR SINE MIR 102 251 -11 398 206 61 61 chr20 37946510 37946641 -28721364 + MIR SINE MIR 66 196 -66 254 262 106 57 chr20 37946871 37947012 -28720993 + MER5A DNA MER1_type 16 163 -26 197 328 0 0 chr20 37947019 37947077 -28720928 - L2 LINE L2 -206 3066 3009 198 274 16 16 chr20 37947635 37947697 -28720308 + L3 LINE CR1 1382 1443 -134 334 256 13 0 chr20 37947784 37947862 -28720143 + MIR SINE MIR 68 146 -62 631 264 17 22 chr20 37947956 37948134 -28719871 - MIR SINE MIR -64 198 22 399 298 75 6 chr20 37948224 37948385 -28719620 + MIR SINE MIR 79 250 -12 199 130 72 87 chr20 37948832 37948901 -28719104 + MIR SINE MIR 57 124 -84 629 277 6 6 chr20 37948988 37949147 -28718858 + MIR SINE MIR 38 196 -66 437 274 51 69 chr20 37949152 37949264 -28718741 + MER5B DNA MER1_type 4 113 -65 2162 99 3 40 chr20 37949264 37949586 -28718419 - AluSx SINE Alu -2 310 1 437 274 51 69 chr20 37949586 37949648 -28718357 + MER5B DNA MER1_type 113 175 -3 270 217 50 0 chr20 37949760 37949820 -28718185 - MIR SINE MIR -61 147 85 859 261 46 0 chr20 37950467 37950685 -28717320 + MIR SINE MIR 29 256 -6 322 303 146 6 chr20 37950953 37951131 -28716874 + MIR SINE MIR 39 241 -21 831 295 147 15 chr20 37951669 37952393 -28715612 + L2 LINE L2 2492 3311 -2 1064 153 16 16 chr20 37952701 37952890 -28715115 - MER5A DNA MER1_type 0 189 1 990 169 6 0 chr20 37953022 37953194 -28714811 + MIR SINE MIR 60 232 -30 902 222 79 0 chr20 37953487 37953690 -28714315 + MER20 DNA MER1_type 1 219 0 2011 125 0 38 chr20 37953954 37954274 -28713731 - AluSx SINE Alu -4 308 1 947 170 64 5 chr20 37954305 37954493 -28713512 - MIR SINE MIR -51 211 13 723 271 77 0 chr20 37954952 37955133 -28712872 - MER117 DNA MER1_type -2 195 1 470 244 150 0 chr20 37955343 37955503 -28712502 + MER5A DNA MER1_type 4 187 -2 240 179 299 51 chr20 37955718 37955835 -28712170 + MIR3 SINE MIR 17 162 -46 202 260 0 20 chr20 37956444 37956494 -28711511 + MIR3 SINE MIR 109 157 -51 683 297 69 57 chr20 37956586 37957007 -28710998 + MLT1K LTR MaLR 152 577 -11 191 267 57 57 chr20 37957316 37957421 -28710584 + L2 LINE L2 2986 3090 -182 610 295 78 39 chr20 37957512 37957770 -28710235 + MLT1L LTR MaLR 40 307 -308 459 225 183 0 chr20 37958168 37958337 -28709668 + MIR SINE MIR 63 262 0 201 213 193 33 chr20 37958327 37958444 -28709561 - MIR SINE MIR -105 157 18 * 241 358 68 20 chr20 37958451 37958599 -28709406 + L2 LINE L2 3106 3260 -12 389 158 12 0 chr20 37959191 37959273 -28708732 + (CTCA)n Simple_repeat Simple_repeat 4 86 0 367 288 27 55 chr20 37959304 37959395 -28708610 + L2 LINE L2 3008 3100 -172 951 147 43 38 chr20 37959395 37959579 -28708426 + MER5A DNA MER1_type 1 185 -4 2276 102 3 0 chr20 37959579 37959883 -28708122 + AluSp SINE Alu 1 305 -8 367 288 27 55 chr20 37959883 37960039 -28707966 + L2 LINE L2 3098 3206 -66 387 333 0 35 chr20 37960365 37960506 -28707499 + L2 LINE L2 2924 3059 -213 656 289 76 0 chr20 37960558 37960769 -28707236 + MIR SINE MIR 24 250 -12 29 0 0 0 chr20 37961286 37961315 -28706690 + AT_rich Low_complexity Low_complexity 1 29 0 2433 53 0 7 chr20 37961317 37961619 -28706386 + AluY SINE Alu 1 300 -11 302 260 121 43 chr20 37961719 37961808 -28706197 + L1MC4 LINE L1 7695 7776 -266 1774 160 3 14 chr20 37961808 37962101 -28705904 + AluJo SINE Alu 1 290 -22 302 260 121 43 chr20 37962101 37962334 -28705671 + L1MC4 LINE L1 7776 8042 0 2214 133 79 16 chr20 37962782 37963149 -28704856 + MLT1B LTR MaLR 1 390 0 366 353 125 10 chr20 37963191 37963494 -28704511 + L2 LINE L2 2934 3271 -1 288 269 0 0 chr20 37963565 37963643 -28704362 - MER5A DNA MER1_type -108 81 4 2135 181 50 24 chr20 37964303 37964767 -28703238 + MLT1D LTR MaLR 23 498 -7 4142 269 92 27 chr20 37964965 37966544 -28701461 - L2 LINE L2 -655 2659 978 232 316 148 6 chr20 37966558 37966890 -28701115 - L2 LINE L2 -2247 1067 689 180 327 18 0 chr20 37966891 37966946 -28701059 - L2 LINE L2 -2 3311 3256 300 257 0 0 chr20 37966952 37967022 -28700983 - L2 LINE L2 -2616 698 629 404 216 11 0 chr20 37967046 37967134 -28700871 - MIR SINE MIR -86 122 34 721 258 60 103 chr20 37967386 37967754 -28700251 + L2 LINE L2 2918 3269 -3 867 213 106 115 chr20 37967786 37968237 -28699768 + LTR16A1 LTR ERVL 1 447 -10 195 250 0 0 chr20 37968260 37968312 -28699693 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 285 204 0 0 chr20 37968326 37968380 -28699625 - MIR3 SINE MIR -46 162 109 244 246 15 0 chr20 37968785 37968850 -28699155 - MIR SINE MIR 0 262 197 1016 163 23 0 chr20 37968874 37969046 -28698959 - AluJo SINE Alu -17 295 120 455 107 13 0 chr20 37969046 37969121 -28698884 + (TTCC)n Simple_repeat Simple_repeat 3 78 0 316 195 24 73 chr20 37969124 37969206 -28698799 - AluJ/FLAM SINE Alu -223 79 2 490 271 50 7 chr20 37969219 37969359 -28698646 - MIR SINE MIR -74 188 43 296 227 57 34 chr20 37970990 37971078 -28696927 - MER96 DNA MER1_type? -17 158 69 391 262 19 9 chr20 37971302 37971409 -28696596 + MIR SINE MIR 91 198 -64 1368 138 19 31 chr20 37971409 37971670 -28696335 - Tigger5 DNA MER2_type 0 2323 2066 188 67 33 0 chr20 37971762 37971792 -28696213 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 486 272 36 43 chr20 37972482 37972666 -28695339 - MIR SINE MIR -64 144 15 485 333 82 22 chr20 37972785 37973016 -28694989 - MIR SINE MIR -4 258 14 236 268 24 12 chr20 37973284 37973366 -28694639 - MIR SINE MIR 0 262 180 2139 95 0 58 chr20 37973673 37973998 -28694007 - AluSg SINE Alu -4 306 1 758 285 76 31 chr20 37974021 37974422 -28693583 + MLT1K LTR MaLR 126 588 0 888 207 40 10 chr20 37975138 37975401 -28692604 + L2 LINE L2 2768 3036 -277 424 176 224 8 chr20 37975532 37975657 -28692348 + MLT1H LTR MaLR 398 549 0 384 271 125 53 chr20 37976066 37976530 -28691475 + L2 LINE L2 2627 3109 -163 1549 234 31 100 chr20 37976553 37976779 -28691226 + MLT1D LTR MaLR 1 241 -264 838 137 0 0 chr20 37976779 37976896 -28691109 + FLAM_C SINE Alu 1 117 -16 1549 234 31 100 chr20 37976896 37976919 -28691086 + MLT1D LTR MaLR 241 264 -241 1851 141 27 3 chr20 37976919 37977218 -28690787 + AluSx SINE Alu 1 306 -6 1549 234 31 100 chr20 37977218 37977509 -28690496 + MLT1D LTR MaLR 264 505 0 917 172 17 6 chr20 37977627 37977832 -28690173 - AluSg/x SINE Alu 0 312 137 243 0 0 0 chr20 37977835 37977862 -28690143 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1818 149 0 3 chr20 37977866 37978148 -28689857 - AluJb SINE Alu -31 281 1 183 80 0 0 chr20 37978551 37978576 -28689429 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 229 269 42 76 chr20 37978883 37979002 -28689003 + MIR3 SINE MIR 44 158 -50 359 240 20 27 chr20 37979029 37979175 -28688830 + MER113 DNA MER1_type? 13 157 -364 810 221 32 37 chr20 37979189 37979406 -28688599 + MIR SINE MIR 34 249 -13 216 0 0 0 chr20 37979435 37979459 -28688546 + (TTA)n Simple_repeat Simple_repeat 3 26 0 408 20 0 0 chr20 37979460 37979509 -28688496 + (TG)n Simple_repeat Simple_repeat 1 49 0 2446 119 19 8 chr20 37979509 37979886 -28688119 - LTR9B LTR ERV1 -86 558 178 37 52 0 0 chr20 37980002 37980060 -28687945 + AT_rich Low_complexity Low_complexity 1 58 0 464 289 125 17 chr20 37980102 37980334 -28687671 + MER113 DNA MER1_type? 203 459 -62 2144 123 0 0 chr20 37980538 37980838 -28687167 - AluSx SINE Alu -12 300 1 475 234 52 19 chr20 37980841 37980995 -28687010 - L1ME3 LINE L1 -2 6160 6002 195 278 0 82 chr20 37981064 37981161 -28686844 + MIR SINE MIR 114 202 -60 294 291 121 36 chr20 37981341 37981506 -28686499 - MIR SINE MIR -36 226 48 439 251 68 12 chr20 37982343 37982506 -28685499 - L1ME3 LINE L1 -2 6160 5989 242 296 94 72 chr20 37982535 37982758 -28685247 + L1ME4a LINE L1 5894 6121 0 2104 99 0 3 chr20 37982852 37983157 -28684848 - AluSq SINE Alu 0 304 1 303 274 12 12 chr20 37983380 37983464 -28684541 + MIR3 SINE MIR 117 200 -8 1672 168 20 3 chr20 37983478 37983770 -28684235 + AluJo SINE Alu 1 297 -15 2038 122 3 0 chr20 37983867 37984162 -28683843 + AluSx SINE Alu 1 296 -16 292 240 93 13 chr20 37984448 37984523 -28683482 - Charlie8 DNA MER1_type -2334 83 3 200 339 0 0 chr20 37984580 37984639 -28683366 - L3b LINE CR1 -174 1409 1351 292 257 97 0 chr20 37984737 37984850 -28683155 + MIR3 SINE MIR 14 137 -71 383 285 182 6 chr20 37984952 37985149 -28682856 - MIR SINE MIR -30 232 2 217 324 144 0 chr20 37985149 37985245 -28682760 + L2 LINE L2 2647 2758 -556 21 0 0 0 chr20 37985422 37985443 -28682562 + AT_rich Low_complexity Low_complexity 1 21 0 1841 148 3 17 chr20 37985493 37985790 -28682215 + AluJo SINE Alu 1 293 -19 1961 139 0 0 chr20 37986279 37986574 -28681431 + AluSx SINE Alu 9 303 -9 1267 253 77 5 chr20 37986596 37986860 -28681145 - MER113 DNA MER1_type? -29 492 190 2284 89 0 3 chr20 37986860 37987173 -28680832 - AluSq SINE Alu -1 312 1 1267 253 77 5 chr20 37987173 37987300 -28680705 - MER113 DNA MER1_type? -331 190 73 514 306 73 5 chr20 37987541 37987747 -28680258 - L2 LINE L2 -209 3063 2844 408 296 122 9 chr20 37987979 37988192 -28679813 + MIR SINE MIR 22 258 -4 468 174 0 0 chr20 37988412 37988504 -28679501 + (TG)n Simple_repeat Simple_repeat 1 92 0 306 0 0 0 chr20 37988793 37988827 -28679178 + (CA)n Simple_repeat Simple_repeat 1 34 0 212 186 34 17 chr20 37989646 37989705 -28678300 + (CAGAGA)n Simple_repeat Simple_repeat 5 64 0 201 39 0 0 chr20 37989761 37989787 -28678218 + (CGGGG)n Simple_repeat Simple_repeat 2 27 0 23 33 0 0 chr20 37989823 37989853 -28678152 + GC_rich Low_complexity Low_complexity 1 30 0 258 283 119 38 chr20 37990013 37990136 -28677869 + MIR SINE MIR 16 156 -106 351 0 0 0 chr20 37990136 37990175 -28677830 + (ATG)n Simple_repeat Simple_repeat 2 40 0 258 283 119 38 chr20 37990175 37990210 -28677795 + MIR SINE MIR 156 187 -75 857 136 0 21 chr20 37990394 37990534 -28677471 + MLT1A1 LTR MaLR 2 138 -227 383 279 47 0 chr20 37990547 37990633 -28677372 - L1MC4 LINE L1 -1339 6703 6614 338 219 0 68 chr20 37990636 37990738 -28677267 - L1MCa LINE L1 -1338 6984 1996 2152 111 0 14 chr20 37990738 37991027 -28676978 - AluSx SINE Alu -27 285 1 1128 127 40 115 chr20 37991027 37991280 -28676725 + MLT1A1 LTR MaLR 132 365 0 378 236 117 99 chr20 37991387 37991730 -28676275 - L2 LINE L2 -90 3223 2875 235 230 130 10 chr20 37992105 37992205 -28675800 - LTR67 LTR ERVL -5 552 441 672 299 24 14 chr20 37992322 37992529 -28675476 - MIR SINE MIR -51 211 3 1164 145 0 0 chr20 37992598 37992764 -28675241 + FRAM SINE Alu 1 166 0 2085 130 3 3 chr20 37992927 37993220 -28674785 + AluSx SINE Alu 3 295 -17 186 43 0 0 chr20 37993371 37993394 -28674611 + (CA)n Simple_repeat Simple_repeat 1 23 0 408 250 152 0 chr20 37993417 37993549 -28674456 + MIR SINE MIR 82 233 -29 6867 178 26 7 chr20 37993582 37993850 -28674155 + L1MA2 LINE L1 3595 3856 -2448 185 0 40 0 chr20 37993850 37993875 -28674130 + (CACAT)n Simple_repeat Simple_repeat 2 27 0 6867 178 26 7 chr20 37993875 37996257 -28671748 + L1MA2 LINE L1 3856 6304 0 540 294 106 0 chr20 37996545 37996715 -28671290 + MIR SINE MIR 63 250 -12 593 276 32 5 chr20 37996882 37997067 -28670938 - MER117 DNA MER1_type -3 194 5 914 293 75 19 chr20 37997196 37997609 -28670396 + LTR16B LTR ERVL 16 451 -13 2372 98 0 3 chr20 37997795 37998092 -28669913 - AluSq SINE Alu -17 296 1 272 133 100 0 chr20 37998093 37998153 -28669852 - MLT1K LTR MaLR -10 578 513 535 246 8 8 chr20 37998291 37998413 -28669592 - MLT1K LTR MaLR -327 261 140 304 260 30 20 chr20 37998947 37999047 -28668958 + MIR SINE MIR 43 143 -65 623 282 158 28 chr20 37999142 37999406 -28668599 - L2 LINE L2 -18 3254 3026 2336 103 0 0 chr20 37999406 37999706 -28668299 + AluSc SINE Alu 1 300 -9 623 282 158 28 chr20 37999706 37999935 -28668070 - L2 LINE L2 -246 3026 2702 484 316 69 43 chr20 38000613 38000844 -28667161 - L2 LINE L2 -100 3172 2936 496 201 43 5 chr20 38001012 38001182 -28666823 + MER102b DNA MER1_type 76 340 -1 186 184 0 0 chr20 38001274 38001285 -28666720 + (TGGA)n Simple_repeat Simple_repeat 1 11 -38 2613 183 78 22 chr20 38001285 38001820 -28666185 + MLT1F1 LTR MaLR 1 565 -2 186 184 0 0 chr20 38001820 38001857 -28666148 + (TGGA)n Simple_repeat Simple_repeat 10 49 0 1994 230 160 39 chr20 38002497 38003536 -28664469 + L1MC3 LINE L1 5418 6556 -1229 1079 212 60 11 chr20 38003545 38003814 -28664191 + L1MC4 LINE L1 6732 7013 -1029 2042 170 47 72 chr20 38003815 38004133 -28663872 + L1MC3 LINE L1 6456 6781 -1004 1838 168 4 0 chr20 38004133 38004413 -28663592 + AluJb SINE Alu 1 281 -31 348 24 0 0 chr20 38004414 38004455 -28663550 + (GA)n Simple_repeat Simple_repeat 2 42 0 2042 170 47 72 chr20 38004455 38004647 -28663358 + L1MC3 LINE L1 6780 6955 -830 3964 106 99 45 chr20 38004724 38005123 -28662882 - Tigger3(Golem) DNA MER2_type -5 3023 2647 2364 111 0 0 chr20 38005123 38005429 -28662576 - AluSq SINE Alu -7 306 1 3964 106 99 45 chr20 38005429 38005666 -28662339 - Tigger3(Golem) DNA MER2_type -381 2647 2424 1553 174 22 59 chr20 38005666 38005988 -28662017 + AluJo SINE Alu 1 310 -2 3964 106 99 45 chr20 38005988 38006004 -28662001 - Tigger3(Golem) DNA MER2_type -604 2424 2410 2390 94 0 0 chr20 38006004 38006301 -28661704 + AluSq SINE Alu 1 297 -16 3964 106 99 45 chr20 38006301 38006400 -28661605 - Tigger3(Golem) DNA MER2_type -618 2410 2229 517 148 148 0 chr20 38006391 38006479 -28661526 - Tigger3(Golem) DNA MER2_type -2928 101 1 * 1494 185 11 24 chr20 38006479 38006766 -28661239 + L1MC3 LINE L1 7041 7323 -462 263 200 13 53 chr20 38007693 38007768 -28660237 - MIR3 SINE MIR -51 157 86 315 0 0 0 chr20 38007802 38007837 -28660168 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 210 265 10 61 chr20 38007993 38008091 -28659914 - L2 LINE L2 -176 3096 3004 1354 163 32 109 chr20 38008115 38008428 -28659577 + AluJo SINE Alu 1 289 -23 22 35 0 0 chr20 38008437 38008466 -28659539 + AT_rich Low_complexity Low_complexity 1 29 0 282 293 57 0 chr20 38008470 38008576 -28659429 - L2 LINE L2 -291 2981 2870 937 251 94 37 chr20 38008621 38008971 -28659034 - L2 LINE L2 -25 3288 2919 1892 144 42 58 chr20 38009087 38009126 -28658879 - THE1C LTR MaLR 0 375 337 2132 143 13 0 chr20 38009126 38009433 -28658572 + AluSx SINE Alu 1 311 -1 1892 144 42 58 chr20 38009433 38009774 -28658231 - THE1C LTR MaLR -38 337 1 10603 112 29 24 chr20 38009774 38011346 -28656659 - THE1C-int LTR MaLR 0 1580 1 2085 124 73 22 chr20 38011347 38011703 -28656302 - THE1C LTR MaLR -1 374 1 3403 126 97 3 chr20 38011703 38012291 -28655714 + MER39B LTR ERV1 7 649 -4 272 318 178 21 chr20 38012293 38012759 -28655246 - L2 LINE L2 -563 2751 2213 1049 148 0 19 chr20 38013098 38013253 -28654752 + FRAM SINE Alu 12 163 -13 1855 179 0 10 chr20 38013254 38013556 -28654449 + AluJb SINE Alu 2 300 -12 2157 146 0 0 chr20 38013558 38013866 -28654139 + AluJb SINE Alu 1 308 -4 2308 158 108 14 chr20 38013869 38014358 -28653647 - MLT1F LTR MaLR 0 542 8 2721 113 51 5 chr20 38014467 38014876 -28653129 + MSTA LTR MaLR 1 428 0 22 35 0 0 chr20 38014962 38014991 -28653014 + AT_rich Low_complexity Low_complexity 1 29 0 279 305 67 38 chr20 38015035 38015140 -28652865 - L2 LINE L2 -1 3312 3205 1417 196 27 82 chr20 38015150 38015554 -28652451 - MLT1B LTR MaLR -8 382 1 287 271 21 31 chr20 38016437 38016533 -28651472 + L2 LINE L2 2736 2830 -484 874 141 7 0 chr20 38016543 38016692 -28651313 - L1MD3 LINE L1 -14 7981 7832 344 281 117 8 chr20 38016732 38016893 -28651112 - L1ME2 LINE L1 0 6170 5986 235 267 23 12 chr20 38016937 38017023 -28650982 - MER74A LTR ERVL -63 495 409 * 293 153 0 17 chr20 38017009 38017068 -28650937 + MSTB LTR MaLR 284 341 -85 245 272 0 22 chr20 38017081 38017173 -28650832 - MER74B LTR ERVL -159 463 374 * 883 136 21 0 chr20 38017171 38017311 -28650694 - Tigger7 DNA MER2_type -407 143 1 2310 104 0 3 chr20 38017343 38017642 -28650363 - AluSx SINE Alu -14 298 1 230 71 0 48 chr20 38017878 38017920 -28650085 + (TAAAAA)n Simple_repeat Simple_repeat 2 41 0 740 125 108 0 chr20 38017976 38018096 -28649909 - FLAM_C SINE Alu -5 138 6 845 260 59 36 chr20 38018111 38018699 -28649306 - L1ME LINE L1 -688 5474 4876 534 266 74 58 chr20 38018785 38019097 -28648908 + L1ME4a LINE L1 5613 5929 -192 2331 189 34 31 chr20 38019298 38019852 -28648153 + L1ME1 LINE L1 5609 6164 -2 338 283 102 28 chr20 38019889 38020172 -28647833 + L1ME4a LINE L1 5772 6075 -46 741 254 57 18 chr20 38020467 38020695 -28647310 + MIR SINE MIR 16 252 -10 375 232 11 42 chr20 38020959 38021054 -28646951 - L2 LINE L2 -1 3312 3221 282 253 122 33 chr20 38021748 38021900 -28646105 + MIR SINE MIR 42 207 -55 480 229 0 9 chr20 38022098 38022207 -28645798 - LTR67 LTR ERVL 0 557 450 219 258 16 32 chr20 38022265 38022327 -28645678 + L2 LINE L2 3211 3271 -1 1844 145 51 0 chr20 38023477 38023599 -28644406 + AluSx SINE Alu 1 115 -197 225 94 0 0 chr20 38023599 38023631 -28644374 + (CAA)n Simple_repeat Simple_repeat 2 33 0 1844 145 51 0 chr20 38023631 38023784 -28644221 + AluSx SINE Alu 115 290 -22 244 295 53 32 chr20 38023930 38024025 -28643980 - MIR SINE MIR -48 214 118 232 250 0 6 chr20 38024194 38024299 -28643706 - L2 LINE L2 -213 3059 2899 1923 232 77 56 chr20 38025450 38025709 -28642296 + L1MC4 LINE L1 7353 7605 -437 2338 101 7 0 chr20 38025709 38026005 -28642000 + AluSq SINE Alu 3 300 -13 1923 232 77 56 chr20 38026005 38026150 -28641855 + L1MC4 LINE L1 7605 7746 -296 2284 104 3 10 chr20 38026150 38026449 -28641556 + AluSc SINE Alu 1 297 -12 1923 232 77 56 chr20 38026449 38026719 -28641286 + L1MC4 LINE L1 7746 8042 0 672 231 50 11 chr20 38026801 38026983 -28641022 - MIR SINE MIR -61 201 13 406 332 115 5 chr20 38026990 38027198 -28640807 - L2 LINE L2 -125 3147 2917 626 281 42 10 chr20 38027397 38027589 -28640416 + MIR SINE MIR 65 262 0 292 340 19 0 chr20 38027585 38027691 -28640314 - MIR SINE MIR -67 141 34 * 26 30 0 0 chr20 38028331 38028364 -28639641 + AT_rich Low_complexity Low_complexity 1 33 0 1927 118 30 0 chr20 38028561 38028832 -28639173 - AluJb SINE Alu -3 309 31 492 265 30 8 chr20 38029143 38029275 -28638730 - MIR SINE MIR -126 136 2 565 252 103 20 chr20 38029500 38029718 -28638287 - MIR SINE MIR -13 249 16 244 247 62 12 chr20 38029768 38029849 -28638156 + MLT1L LTR MaLR 477 561 -54 323 232 0 40 chr20 38029866 38029965 -28638040 + L1ME1 LINE L1 6016 6110 -56 21 0 0 0 chr20 38030044 38030065 -28637940 + AT_rich Low_complexity Low_complexity 1 21 0 648 256 50 27 chr20 38030134 38030396 -28637609 + MLT1L LTR MaLR 348 615 0 2007 137 0 38 chr20 38030558 38030871 -28637134 - AluSx SINE Alu -11 301 1 765 146 16 16 chr20 38031318 38031478 -28636527 + FLAM_C SINE Alu 2 143 0 368 308 0 25 chr20 38032022 38032142 -28635863 + MIR SINE MIR 34 150 -58 225 320 55 36 chr20 38032199 38032418 -28635587 + L1ME4a LINE L1 5834 6056 -65 691 281 28 43 chr20 38032468 38032721 -28635284 - MIR SINE MIR -2 260 12 237 196 0 0 chr20 38032928 38032979 -28635026 + (CA)n Simple_repeat Simple_repeat 2 52 0 419 217 154 35 chr20 38033420 38033563 -28634442 - MIR SINE MIR -61 147 22 269 301 39 19 chr20 38033859 38033962 -28634043 - MIR SINE MIR -32 230 126 975 224 83 22 chr20 38034609 38034837 -28633168 + MIR SINE MIR 21 262 0 550 299 109 54 chr20 38034985 38035005 -28633000 - L2 LINE L2 0 3313 3296 2296 103 0 10 chr20 38035005 38035307 -28632698 - AluSx SINE Alu -13 299 1 550 299 109 54 chr20 38035307 38035654 -28632351 - L2 LINE L2 -17 3296 2926 1003 240 106 13 chr20 38035780 38035873 -28632132 + MER58B DNA MER1_type 1 84 -2336 1840 140 3 53 chr20 38035873 38036195 -28631810 + AluJb SINE Alu 1 306 -6 1003 240 106 13 chr20 38036195 38036413 -28631592 + MER58B DNA MER1_type 84 341 0 626 300 55 24 chr20 38036927 38037398 -28630607 - MLT1K LTR MaLR -47 541 23 357 271 90 41 chr20 38037433 38037555 -28630450 - L2 LINE L2 -3 3269 3142 367 253 82 63 chr20 38037561 38037719 -28630286 - MIR SINE MIR -73 189 29 496 250 77 48 chr20 38038307 38038612 -28629393 - MLT1H LTR MaLR -2 547 115 230 329 24 0 chr20 38039076 38039158 -28628847 - MIR SINE MIR -102 106 23 273 141 94 16 chr20 38039162 38039226 -28628779 - MIR SINE MIR -77 131 63 449 294 27 60 chr20 38039230 38039414 -28628591 + MIR SINE MIR 13 190 -72 326 188 98 45 chr20 38039840 38039952 -28628053 - MIR SINE MIR -14 248 131 254 293 24 0 chr20 38039933 38040015 -28627990 - L2 LINE L2 0 3313 3230 * 605 284 65 22 chr20 38040027 38040259 -28627746 - MIR SINE MIR -3 259 18 527 294 102 22 chr20 38040370 38040645 -28627360 - L2 LINE L2 -172 3100 2804 1043 196 126 0 chr20 38241247 38241446 -28426559 - MER58A DNA MER1_type 0 224 1 797 276 71 4 chr20 38241613 38241838 -28426167 - MIR SINE MIR -3 259 20 1059 250 139 17 chr20 38242017 38242361 -28425644 + LTR40a LTR ERVL 5 390 -129 1773 137 0 0 chr20 38242473 38242758 -28425247 + MST-int LTR MaLR 15 299 -1352 * 3846 171 0 48 chr20 38242751 38243507 -28424498 + THE1-int LTR MaLR 417 1136 -444 642 105 0 0 chr20 38243611 38243706 -28424299 + MLT1A1 LTR MaLR 271 365 0 230 333 48 24 chr20 38243799 38243925 -28424080 - L2 LINE L2 -3 3269 3141 259 154 31 0 chr20 38244984 38245049 -28422956 + GA-rich Low_complexity Low_complexity 1 67 0 218 393 84 0 chr20 38245546 38245653 -28422352 + L2 LINE L2 291 406 -2908 1429 188 18 7 chr20 38245912 38246194 -28421811 - MER89 LTR ERV1 -3 556 272 656 263 113 45 chr20 38246363 38246717 -28421288 - L2 LINE L2 -1 3312 2935 2526 71 0 3 chr20 38246727 38247037 -28420968 + AluSc SINE Alu 1 309 0 983 185 45 19 chr20 38247043 38247308 -28420697 - Zaphod DNA AcHobo -165 3866 3595 26 0 0 0 chr20 38247351 38247377 -28420628 + AT_rich Low_complexity Low_complexity 1 26 0 273 163 0 0 chr20 38248646 38248695 -28419310 - L1MD1 LINE L1 -266 5976 5928 498 243 37 7 chr20 38248725 38248861 -28419144 - L1M4 LINE L1 -3454 2692 2553 308 216 0 40 chr20 38248973 38249047 -28418958 + L1MCa LINE L1 1994 2064 -4362 * 311 300 127 65 chr20 38249021 38249344 -28418661 - L1ME4a LINE L1 -117 6004 5662 1005 95 0 53 chr20 38249391 38249581 -28418424 + (TA)n Simple_repeat Simple_repeat 1 180 0 1749 177 10 7 chr20 38249583 38249715 -28418290 + AluJb SINE Alu 1 131 -181 2336 105 0 3 chr20 38249715 38250020 -28417985 + AluSg SINE Alu 1 304 -6 1749 177 10 7 chr20 38250020 38250181 -28417824 + AluJb SINE Alu 131 295 -17 599 118 11 0 chr20 38250219 38250312 -28417693 - AluSg/x SINE Alu 0 310 217 384 271 33 36 chr20 38250790 38250937 -28417068 + MIR3 SINE MIR 18 161 -47 208 264 38 0 chr20 38250948 38251001 -28417004 + L2 LINE L2 3218 3272 0 864 286 143 23 chr20 38251008 38251136 -28416869 - L2 LINE L2 -20 3293 3182 1838 172 10 10 chr20 38251136 38251444 -28416561 + AluJo SINE Alu 1 308 -4 864 286 143 23 chr20 38251444 38252023 -28415982 - L2 LINE L2 -131 3182 2498 200 309 24 36 chr20 38252045 38252129 -28415876 - L2 LINE L2 0 3313 3231 * 271 253 161 21 chr20 38252105 38252291 -28415714 - L2 LINE L2 -743 2571 2360 23 0 0 0 chr20 38252989 38253012 -28414993 + AT_rich Low_complexity Low_complexity 1 23 0 569 301 17 38 chr20 38253175 38253467 -28414538 - L1ME4a LINE L1 -224 5897 5612 638 179 0 27 chr20 38253470 38253582 -28414423 - FLAM_C SINE Alu -33 110 2 228 292 22 22 chr20 38253593 38253682 -28414323 - L1ME4a LINE L1 -522 5599 5511 410 289 64 19 chr20 38254288 38254444 -28413561 - MIR SINE MIR -79 183 21 961 272 84 46 chr20 38254528 38254896 -28413109 - MER115 DNA AcHobo 0 693 312 226 324 27 14 chr20 38255553 38255627 -28412378 - L2 LINE L2 0 3313 3239 234 325 149 40 chr20 38255703 38256199 -28411806 + L2 LINE L2 1965 2514 -800 244 268 115 103 chr20 38257784 38258045 -28409960 - L2 LINE L2 -498 2816 2553 2252 123 0 0 chr20 38258276 38258578 -28409427 - AluSx SINE Alu -10 302 1 231 340 0 32 chr20 38258591 38258685 -28409320 - MIR SINE MIR -152 110 20 474 290 60 23 chr20 38258875 38259092 -28408913 - L2 LINE L2 -422 2892 2668 514 0 16 0 chr20 38259236 38259299 -28408706 + MADE1 DNA Mariner 1 64 -16 1956 122 0 34 chr20 38259299 38259594 -28408411 - AluSx SINE Alu -18 294 10 257 179 0 107 chr20 38259594 38259655 -28408350 + MADE1 DNA Mariner 29 80 0 238 98 49 82 chr20 38259854 38259915 -28408090 + L1MB7 LINE L1 6010 6068 -116 334 86 17 0 chr20 38259916 38259974 -28408031 + L1MB7 LINE L1 6111 6169 -15 253 243 57 14 chr20 38260249 38260319 -28407686 - MIR SINE MIR -64 198 126 447 265 35 53 chr20 38260355 38260525 -28407480 + MIR SINE MIR 17 183 -79 869 268 50 0 chr20 38260549 38260769 -28407236 + MIR SINE MIR 6 236 -26 2121 129 0 16 chr20 38260831 38261140 -28406865 + AluSx SINE Alu 1 304 -8 221 240 0 0 chr20 38261167 38261217 -28406788 + L2 LINE L2 3262 3311 -2 349 223 65 63 chr20 38261314 38261442 -28406563 + MIR SINE MIR 20 147 -61 287 219 41 0 chr20 38261868 38261941 -28406064 + MER5A DNA MER1_type 9 84 -105 242 231 56 56 chr20 38262025 38262133 -28405872 - MIR3 SINE MIR -50 158 51 402 176 231 0 chr20 38262538 38262629 -28405376 - MIR SINE MIR -125 137 26 1389 220 150 35 chr20 38262773 38263326 -28404679 - MER50 LTR ERV1 -47 687 35 218 212 61 15 chr20 38263828 38263894 -28404111 + L2 LINE L2 2989 3057 -256 434 251 108 48 chr20 38263936 38264103 -28403902 + MIR SINE MIR 80 256 -6 509 277 42 0 chr20 38264337 38264503 -28403502 - MLT1F1 LTR MaLR -394 173 1 1841 174 10 3 chr20 38264793 38265097 -28402908 + AluJo SINE Alu 1 306 -6 323 280 111 42 chr20 38265327 38265588 -28402417 - L1MC/D LINE L1 -2022 5786 5508 299 320 40 8 chr20 38265636 38265758 -28402247 + MIR SINE MIR 19 146 -62 183 333 28 0 chr20 38266334 38266406 -28401599 + MIR SINE MIR 32 105 -157 537 297 42 9 chr20 38266413 38266625 -28401380 - LTR16C LTR ERVL -10 481 263 602 240 20 34 chr20 38266627 38266831 -28401174 + L1ME3 LINE L1 5962 6162 0 2155 126 7 0 chr20 38266837 38267146 -28400859 + AluSx SINE Alu 1 311 -1 340 263 86 86 chr20 38267197 38267383 -28400622 - LTR16C LTR ERVL -235 256 71 245 247 47 14 chr20 38267425 38267515 -28400490 + MIR SINE MIR 87 181 -63 216 264 184 16 chr20 38267540 38267665 -28400340 - L2 LINE L2 -213 3059 2914 2309 75 46 0 chr20 38267893 38268173 -28399832 - AluSc SINE Alu -16 293 1 299 295 32 95 chr20 38268218 38268322 -28399683 - MIR SINE MIR -12 250 141 420 77 0 0 chr20 38268322 38268387 -28399618 + (TTTAG)n Simple_repeat Simple_repeat 3 67 0 2255 92 0 3 chr20 38268387 38268669 -28399336 - AluSx SINE Alu -30 282 2 299 295 32 95 chr20 38268669 38268753 -28399252 - MIR SINE MIR -119 143 73 180 186 0 70 chr20 38268886 38268929 -28399076 + MIR SINE MIR 120 159 -103 211 254 16 16 chr20 38269015 38269078 -28398927 - L2 LINE L2 -527 2787 2725 229 246 18 0 chr20 38269463 38269520 -28398485 + MIR SINE MIR 112 169 -93 305 170 0 0 chr20 38269626 38269679 -28398326 - L2 LINE L2 -213 3059 3007 271 184 0 0 chr20 38269831 38269880 -28398125 - L2 LINE L2 0 3313 3265 206 291 82 45 chr20 38270668 38270778 -28397227 + MIR SINE MIR 90 203 -59 469 194 39 0 chr20 38270781 38270884 -28397121 - LTR16C LTR ERVL -3 488 382 189 0 0 0 chr20 38270884 38270905 -28397100 + (GGGAA)n Simple_repeat Simple_repeat 2 22 0 334 231 157 14 chr20 38270916 38271063 -28396942 - LTR16C LTR ERVL -164 327 160 1857 137 28 113 chr20 38271103 38271314 -28396691 - MLT1B LTR MaLR -1 389 230 2017 129 3 55 chr20 38271314 38271640 -28396365 + AluSx SINE Alu 1 309 -3 1857 137 28 113 chr20 38271640 38271853 -28396152 - MLT1B LTR MaLR -160 230 1 407 252 59 0 chr20 38271902 38272021 -28395984 + MER33 DNA MER1_type 1 126 -198 192 40 0 0 chr20 38272021 38272046 -28395959 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2165 132 0 0 chr20 38272048 38272337 -28395668 + AluSx SINE Alu 1 289 -23 21 0 0 0 chr20 38272349 38272370 -28395635 + AT_rich Low_complexity Low_complexity 1 21 0 595 121 190 0 chr20 38272399 38272568 -28395437 + Charlie5 DNA MER1_type 2375 2619 0 1063 188 15 0 chr20 38272732 38272934 -28395071 - L1MB5 LINE L1 0 6174 5970 495 295 133 54 chr20 38272964 38273499 -28394506 - L1MC4a LINE L1 -1978 5830 5254 252 269 0 0 chr20 38274317 38274369 -28393636 + MIR SINE MIR 90 141 -67 187 164 0 146 chr20 38274356 38274373 -28393632 + MER5A DNA MER1_type 55 73 -116 * 1679 175 7 42 chr20 38274373 38274681 -28393324 + AluJb SINE Alu 1 297 -15 187 164 0 146 chr20 38274681 38274718 -28393287 + MER5A DNA MER1_type 73 101 -88 272 84 42 14 chr20 38275631 38275702 -28392303 + (CA)n Simple_repeat Simple_repeat 2 74 0 517 101 47 18 chr20 38275722 38275891 -28392114 + (CA)n Simple_repeat Simple_repeat 1 174 0 544 113 53 13 chr20 38275974 38276281 -28391724 + (CA)n Simple_repeat Simple_repeat 1 319 0 2244 116 0 3 chr20 38276687 38276981 -28391024 - AluSg SINE Alu -17 293 1 262 288 128 0 chr20 38276984 38277109 -28390896 - MIR SINE MIR -70 192 52 3746 142 27 22 chr20 38277376 38278008 -28389997 - MER41B LTR ERV1 0 635 1 208 315 114 34 chr20 38278008 38278163 -28389842 - MIR SINE MIR -31 177 12 2180 145 0 3 chr20 38279125 38279436 -28388569 + AluSx SINE Alu 1 310 -2 2320 93 3 29 chr20 38279796 38280109 -28387896 + AluSx SINE Alu 1 305 -7 196 239 43 0 chr20 38280383 38280429 -28387576 + L2 LINE L2 3223 3270 -2 2364 99 3 3 chr20 38280707 38281020 -28386985 + AluSq SINE Alu 1 313 0 278 268 32 8 chr20 38281100 38281223 -28386782 + (TA)n Simple_repeat Simple_repeat 1 126 0 2144 125 0 0 chr20 38281237 38281526 -28386479 - AluJb SINE Alu -18 294 6 788 182 136 33 chr20 38281538 38281780 -28386225 - L1ME3A LINE L1 0 6170 5904 2460 51 3 7 chr20 38281875 38282170 -28385835 - AluY SINE Alu -2 309 16 2324 104 0 0 chr20 38282171 38282468 -28385537 + AluSx SINE Alu 15 311 -1 2018 167 0 0 chr20 38282492 38282798 -28385207 + AluJb SINE Alu 1 306 -6 1022 225 56 43 chr20 38282800 38283102 -28384903 - L1ME3A LINE L1 -310 5860 5555 488 258 15 1 chr20 38283101 38283238 -28384767 - L1MC4a LINE L1 -294 5827 5693 * 222 37 0 0 chr20 38283536 38283563 -28384442 + (TG)n Simple_repeat Simple_repeat 1 27 0 2426 106 0 0 chr20 38284779 38285082 -28382923 + AluSx SINE Alu 1 303 -9 2171 132 0 0 chr20 38285243 38285538 -28382467 + AluSx SINE Alu 1 295 -17 237 33 0 0 chr20 38285538 38285568 -28382437 + (TA)n Simple_repeat Simple_repeat 2 31 0 600 284 95 0 chr20 38286141 38286310 -28381695 - MIR SINE MIR -1 261 77 221 271 17 0 chr20 38286915 38286974 -28381031 - MIR SINE MIR 0 262 203 2091 141 0 0 chr20 38286988 38287278 -28380727 + AluJb SINE Alu 1 290 -22 776 164 0 50 chr20 38287726 38287887 -28380118 + FLAM_C SINE Alu 1 154 0 25 0 0 0 chr20 38287924 38287949 -28380056 + AT_rich Low_complexity Low_complexity 1 25 0 495 249 144 51 chr20 38288058 38288134 -28379871 + L1ME LINE L1 5537 5604 -517 2357 102 3 0 chr20 38288134 38288439 -28379566 + AluSq SINE Alu 1 306 -7 495 249 144 51 chr20 38288439 38288619 -28379386 + L1ME LINE L1 5604 5817 -304 371 267 60 95 chr20 38288986 38289271 -28378734 + L2 LINE L2 2928 3202 -111 719 261 46 11 chr20 38289324 38289708 -28378297 + LTR33A LTR ERVL 60 521 -2 34 0 0 0 chr20 38289872 38289906 -28378099 + AT_rich Low_complexity Low_complexity 1 34 0 1739 181 3 7 chr20 38289910 38290208 -28377797 + AluJo SINE Alu 3 299 -13 903 238 162 38 chr20 38291368 38291788 -28376217 - MLT1K LTR MaLR -4 472 1 255 307 11 11 chr20 38291788 38291876 -28376129 - MLT1K LTR MaLR -483 105 18 529 301 89 24 chr20 38292304 38292517 -28375488 + MIR SINE MIR 8 234 -28 25 31 0 0 chr20 38292557 38292589 -28375416 + AT_rich Low_complexity Low_complexity 1 32 0 270 214 112 20 chr20 38293044 38293142 -28374863 + MIR3 SINE MIR 81 187 -21 776 251 43 0 chr20 38293469 38293656 -28374349 + MIR SINE MIR 6 200 -62 2333 88 7 0 chr20 38294133 38294440 -28373565 + AluSg SINE Alu 1 309 -1 1857 126 0 36 chr20 38294601 38294902 -28373103 - AluSx SINE Alu -12 300 11 2279 88 0 0 chr20 38295115 38295410 -28372595 + AluSg SINE Alu 1 295 -15 232 310 124 0 chr20 38295839 38295968 -28372037 + MIR SINE MIR 117 261 -1 503 238 33 8 chr20 38296703 38296825 -28371180 + L2 LINE L2 3142 3266 -6 338 313 67 30 chr20 38297621 38297755 -28370250 + MIR SINE MIR 75 213 -49 700 63 18 0 chr20 38297893 38298004 -28370001 + (TCTCCC)n Simple_repeat Simple_repeat 1 113 0 8788 22 1 241 chr20 38298004 38299761 -28368244 + SVA Other Other 50 1383 -3 229 308 133 0 chr20 38299807 38299927 -28368078 + MIR SINE MIR 73 208 -54 254 214 36 0 chr20 38299987 38300043 -28367962 - LTR16C LTR ERVL 0 491 434 2300 90 0 0 chr20 38300082 38300382 -28367623 - AluY SINE Alu -11 300 1 1267 168 172 11 chr20 38300382 38300650 -28367355 - LTR48 LTR ERV1 -476 311 1 1611 165 6 32 chr20 38301321 38301636 -28366369 - AluJb SINE Alu -5 307 1 2166 122 0 0 chr20 38301639 38301951 -28366054 - AluSq SINE Alu -1 312 1 290 203 41 114 chr20 38302273 38302396 -28365609 - L1MC4a LINE L1 -1916 5892 5779 620 256 42 5 chr20 38302403 38302594 -28365411 - L1MC4a LINE L1 -1980 5828 5631 899 240 85 27 chr20 38302766 38303024 -28364981 + MER77 LTR ERV1 41 313 -292 1452 161 164 0 chr20 38303031 38303330 -28364675 - LTR48 LTR ERV1 -236 551 204 1227 259 20 12 chr20 38303324 38303629 -28364376 + MER77 LTR ERV1 318 601 -4 * 318 280 72 0 chr20 38303840 38303965 -28364040 - LTR67 LTR ERVL 0 557 424 466 227 242 0 chr20 38304173 38304305 -28363700 - MER5A DNA MER1_type 0 189 26 394 231 144 29 chr20 38304322 38304426 -28363579 + L2 LINE L2 3198 3313 0 2435 119 8 39 chr20 38304576 38304739 -28363266 + THE1C LTR MaLR 1 168 -207 2104 120 0 3 chr20 38304739 38305048 -28362957 - AluSx SINE Alu -4 308 1 2435 119 8 39 chr20 38305048 38305271 -28362734 + THE1C LTR MaLR 168 375 0 299 211 0 0 chr20 38305345 38305402 -28362603 + L1MC3 LINE L1 7047 7103 -682 437 232 9 36 chr20 38305404 38305516 -28362489 + MLT1F1 LTR MaLR 45 153 -414 464 114 0 0 chr20 38305516 38305586 -28362419 + L1MC3 LINE L1 7224 7293 -492 605 250 67 45 chr20 38305590 38305813 -28362192 - MLT1A1 LTR MaLR -2 372 145 2134 138 32 52 chr20 38305813 38306219 -28361786 + MER57A LTR ERV1 1 398 -5 2033 120 3 19 chr20 38306220 38306536 -28361469 + AluSx SINE Alu 1 311 -1 781 229 0 6 chr20 38306546 38306703 -28361302 - MLT1A1 LTR MaLR -209 156 1 1824 189 116 9 chr20 38306703 38307142 -28360863 + L1MC3 LINE L1 7291 7776 -9 1604 175 45 0 chr20 38307159 38307445 -28360560 - AluJb SINE Alu -13 299 1 267 106 0 0 chr20 38307479 38307526 -28360479 + L1MD3 LINE L1 7947 7993 -2 2130 107 0 7 chr20 38307536 38307836 -28360169 + AluSx SINE Alu 1 298 -14 867 136 8 0 chr20 38308207 38308339 -28359666 + FLAM_C SINE Alu 1 133 0 193 297 56 82 chr20 38308493 38308688 -28359317 + L2 LINE L2 2120 2309 -1005 657 120 0 0 chr20 38309190 38309282 -28358723 + AluSg/x SINE Alu 204 295 -17 329 267 0 11 chr20 38309334 38309424 -28358581 + L1ME3A LINE L1 5463 5551 -613 1686 179 36 36 chr20 38309433 38309769 -28358236 - MLT1A2 LTR MaLR -11 363 28 638 196 0 0 chr20 38309769 38309876 -28358129 + FLAM_A SINE Alu 22 128 -14 293 253 138 0 chr20 38309879 38309966 -28358039 - L1MC/D LINE L1 -2001 5807 5709 2187 225 78 30 chr20 38310020 38310612 -28357393 + L1ME3A LINE L1 5545 6164 -6 505 235 71 131 chr20 38310704 38311139 -28356866 + L1MC4a LINE L1 5666 6076 -45 675 180 74 0 chr20 38311175 38311297 -28356708 + FLAM_C SINE Alu 2 132 -11 243 0 0 0 chr20 38311300 38311327 -28356678 + (TTTAA)n Simple_repeat Simple_repeat 1 27 0 2360 166 100 25 chr20 38311342 38311812 -28356193 - MLT1D LTR MaLR 0 505 1 269 235 15 0 chr20 38311818 38311886 -28356119 - HAL1 LINE L1 -9 2498 2430 235 231 138 0 chr20 38312165 38312230 -28355775 + MIR SINE MIR 67 140 -122 1073 220 42 83 chr20 38312240 38312710 -28355295 + MLT1J1 LTR MaLR 1 446 0 220 276 124 55 chr20 38313039 38313184 -28354821 + L2 LINE L2 3149 3303 -10 1492 186 51 111 chr20 38313760 38313798 -28354207 + MLT1C LTR MaLR 4 43 -424 2128 122 0 0 chr20 38313798 38314101 -28353904 + AluSx SINE Alu 1 303 -9 1492 186 51 111 chr20 38314101 38314512 -28353493 + MLT1C LTR MaLR 43 423 -44 1716 161 3 11 chr20 38314512 38314798 -28353207 - AluJo SINE Alu -28 284 1 1492 186 51 111 chr20 38314798 38314841 -28353164 + MLT1C LTR MaLR 423 467 0 627 250 9 69 chr20 38315270 38315486 -28352519 - L2 LINE L2 0 3313 3111 2309 217 69 81 chr20 38315487 38315589 -28352416 - L1MC4a LINE L1 -862 6946 6844 2423 112 19 24 chr20 38315589 38315963 -28352042 - THE1C LTR MaLR 0 375 4 2309 217 69 81 chr20 38315963 38316714 -28351291 - L1MC4a LINE L1 -964 6844 6103 * 3587 237 52 24 chr20 38316711 38317881 -28350124 - L1MC4a LINE L1 -736 5506 4304 239 301 87 29 chr20 38317880 38318053 -28349952 - L1MC4a LINE L1 -2342 3804 3622 * 269 119 16 19 chr20 38318150 38318217 -28349788 - L1 LINE L1 -2663 3483 3414 1705 276 137 12 chr20 38318538 38319100 -28348905 + MER115 DNA AcHobo 1 632 -61 1866 156 46 46 chr20 38319225 38319365 -28348640 + MLT1B LTR MaLR 1 140 -250 1524 160 0 0 chr20 38319365 38319602 -28348403 - AluSx SINE Alu -73 239 3 1866 156 46 46 chr20 38319602 38319851 -28348154 + MLT1B LTR MaLR 139 390 0 315 0 0 0 chr20 38320038 38320073 -28347932 + (TG)n Simple_repeat Simple_repeat 2 36 0 369 309 94 21 chr20 38320145 38320336 -28347669 - L1MC4a LINE L1 -2958 3188 2984 1642 160 3 14 chr20 38320406 38320693 -28347312 + AluJo SINE Alu 1 284 -28 24 0 0 0 chr20 38320734 38320758 -28347247 + AT_rich Low_complexity Low_complexity 1 24 0 375 332 69 39 chr20 38320889 38321172 -28346833 - L1MC4a LINE L1 -3123 3023 2727 2326 116 16 29 chr20 38321172 38321551 -28346454 - THE1C LTR MaLR 0 375 2 375 332 69 39 chr20 38321551 38321601 -28346404 - L1MC4a LINE L1 -3419 2727 2680 2244 113 7 0 chr20 38321601 38321910 -28346095 - AluSx SINE Alu -1 311 1 180 111 0 0 chr20 38322527 38322554 -28345451 + (TTG)n Simple_repeat Simple_repeat 1 27 0 759 181 8 8 chr20 38323029 38323162 -28344843 + AluJo SINE Alu 3 135 -177 21 0 0 0 chr20 38323169 38323190 -28344815 + AT_rich Low_complexity Low_complexity 1 21 0 2307 66 0 0 chr20 38323395 38323682 -28344323 - AluY SINE Alu -24 287 1 26 30 0 0 chr20 38323734 38323767 -28344238 + AT_rich Low_complexity Low_complexity 1 33 0 1182 245 60 15 chr20 38324018 38324349 -28343656 - MLT1I LTR MaLR 0 409 64 233 209 0 30 chr20 38324509 38324576 -28343429 - L1ME3A LINE L1 -8 6162 6098 2225 113 0 0 chr20 38324615 38324926 -28343079 - AluSx SINE Alu -1 311 1 1387 172 56 17 chr20 38325254 38325556 -28342449 + L1ME3A LINE L1 5839 6152 -18 931 150 38 12 chr20 38325670 38325830 -28342175 + AluJo SINE Alu 137 300 -2 788 231 108 34 chr20 38325907 38325947 -28342058 - MLT1J LTR MaLR 0 511 475 189 74 0 0 chr20 38325947 38325974 -28342031 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 788 231 108 34 chr20 38325974 38326201 -28341804 - MLT1J LTR MaLR -36 475 224 1116 256 84 34 chr20 38326291 38326647 -28341358 + LTR41 LTR ERVL 255 628 -145 796 153 7 28 chr20 38326647 38326675 -28341330 - FLAM_C SINE Alu -170 142 115 6130 94 16 50 chr20 38326675 38328172 -28339833 + SVA Other Other 57 1386 0 796 153 7 28 chr20 38328172 38328286 -28339719 - FLAM_C SINE Alu -197 115 2 2089 77 47 14 chr20 38328821 38329118 -28338887 + AluSg SINE Alu 1 307 -3 1850 161 47 145 chr20 38329165 38329709 -28338296 + L1MC4 LINE L1 7454 7863 -132 2221 87 0 34 chr20 38329709 38330031 -28337974 - AluY SINE Alu 0 311 1 1850 161 47 145 chr20 38330031 38330148 -28337857 + L1MC4 LINE L1 7863 7990 -5 851 215 58 14 chr20 38330208 38330431 -28337574 - MIR SINE MIR 0 262 30 1963 128 17 0 chr20 38330769 38331059 -28336946 - AluSx SINE Alu -16 296 2 409 302 163 0 chr20 38331137 38331225 -28336780 + MIR SINE MIR 28 100 -162 2408 134 20 71 chr20 38331225 38331298 -28336707 - MSTB LTR MaLR 0 426 351 2358 69 0 0 chr20 38331298 38331589 -28336416 + AluY SINE Alu 2 292 -19 2408 134 20 71 chr20 38331589 38331964 -28336041 - MSTB LTR MaLR -75 351 1 409 302 163 0 chr20 38331964 38332077 -28335928 + MIR SINE MIR 100 262 0 1921 128 0 16 chr20 38332461 38332765 -28335240 + AluSx SINE Alu 1 299 -13 1020 135 5 100 chr20 38333441 38333517 -28334488 + MER5A DNA MER1_type 1 83 -106 2094 94 27 3 chr20 38333517 38333814 -28334191 + AluSx SINE Alu 3 306 -6 1020 135 5 100 chr20 38333814 38333937 -28334068 + MER5A DNA MER1_type 83 181 -8 1708 156 38 14 chr20 38333947 38334236 -28333769 - AluSx SINE Alu -16 296 1 1971 125 0 3 chr20 38334768 38335063 -28332942 + AluSx SINE Alu 1 294 -18 1838 177 22 41 chr20 38335418 38335464 -28332541 + MLT1A2 LTR MaLR 1 46 -328 2087 144 52 6 chr20 38335464 38335812 -28332193 + THE1B LTR MaLR 1 364 0 1838 177 22 41 chr20 38335812 38336133 -28331872 + MLT1A2 LTR MaLR 46 361 -13 254 50 25 0 chr20 38336412 38336452 -28331553 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 22 0 0 0 chr20 38336802 38336824 -28331181 + AT_rich Low_complexity Low_complexity 1 22 0 1533 99 0 68 chr20 38336854 38337106 -28330899 - AluSq SINE Alu -1 312 78 500 301 26 0 chr20 38337229 38337385 -28330620 + L2 LINE L2 2565 2724 -590 651 181 7 43 chr20 38337536 38337674 -28330331 + FLAM_C SINE Alu 1 133 0 2333 74 13 0 chr20 38337687 38337985 -28330020 + AluSg1 SINE Alu 1 302 -7 784 136 141 49 chr20 38338036 38338144 -28329861 + Tigger1 DNA MER2_type 2194 2291 -127 667 186 8 16 chr20 38338144 38338268 -28329737 - FLAM_A SINE Alu -10 123 1 784 136 141 49 chr20 38338268 38338343 -28329662 + Tigger1 DNA MER2_type 2291 2394 -24 278 306 99 9 chr20 38338369 38338480 -28329525 + L2 LINE L2 3150 3270 -2 1836 135 19 19 chr20 38339025 38339337 -28328668 + AluSx SINE Alu 1 312 0 1565 169 53 7 chr20 38339559 38339843 -28328162 - AluJo SINE Alu -5 297 1 593 233 0 0 chr20 38340001 38340104 -28327901 - MER81 DNA DNA -5 109 7 2073 204 93 55 chr20 38342399 38342564 -28325441 + L1MA9 LINE L1 5615 5772 -540 189 107 0 0 chr20 38342564 38342592 -28325413 + (CA)n Simple_repeat Simple_repeat 1 28 0 2073 204 93 55 chr20 38342592 38342627 -28325378 + L1MA9 LINE L1 5772 5804 -508 2273 87 0 3 chr20 38342627 38342926 -28325079 + AluSq SINE Alu 1 298 -15 582 75 0 0 chr20 38342848 38342928 -28325077 + AluSp/q SINE Alu 221 300 -13 * 1538 194 0 61 chr20 38342933 38343263 -28324742 + AluJo SINE Alu 1 310 -2 2073 204 93 55 chr20 38343263 38343689 -28324316 + L1MA9 LINE L1 5809 6274 -38 2095 127 6 19 chr20 38343705 38344021 -28323984 + AluSx SINE Alu 1 312 0 230 279 200 21 chr20 38344377 38344567 -28323438 - L2 LINE L2 -18 3254 3031 1047 161 94 22 chr20 38344752 38344976 -28323029 + LTR32 LTR ERVL 232 471 0 821 208 28 6 chr20 38345309 38345487 -28322518 - MER5A DNA MER1_type -6 183 2 1839 146 15 7 chr20 38345621 38345895 -28322110 + AluJb SINE Alu 26 301 -11 375 23 0 0 chr20 38346805 38346849 -28321156 + (CA)n Simple_repeat Simple_repeat 2 45 0 1168 280 35 35 chr20 38347539 38347964 -28320041 + MER68 LTR ERV1 67 491 -71 1258 131 58 10 chr20 38348884 38349090 -28318915 - AluJb SINE Alu -11 301 86 2364 93 16 13 chr20 38349850 38350161 -28317844 + AluSq SINE Alu 1 312 -1 2022 108 36 7 chr20 38350163 38350462 -28317543 + AluSx SINE Alu 1 307 0 532 188 0 0 chr20 38352514 38352610 -28315395 - AluSg/x SINE Alu -8 301 206 940 182 26 0 chr20 38352611 38352765 -28315240 - AluJo SINE Alu -154 158 1 2108 133 0 10 chr20 38352789 38353091 -28314914 - AluSx SINE Alu -13 299 1 694 147 28 0 chr20 38353183 38353292 -28314713 + AluJo/FLAM SINE Alu 4 115 -187 654 158 75 48 chr20 38353292 38353438 -28314567 + FRAM SINE Alu 1 40 0 263 330 52 0 chr20 38354544 38354659 -28313346 + MIR SINE MIR 118 238 -24 256 197 70 56 chr20 38355479 38355550 -28312455 + L2 LINE L2 3163 3234 -38 2401 93 41 11 chr20 38356219 38356583 -28311422 + THE1C LTR MaLR 1 375 0 484 275 13 22 chr20 38356665 38356826 -28311179 + MIR SINE MIR 60 219 -43 1072 152 24 0 chr20 38356966 38357131 -28310874 + AluJb SINE Alu 136 304 -8 983 223 63 7 chr20 38357137 38357162 -28310843 - MER33 DNA MER1_type -2309 276 254 2524 78 3 0 chr20 38357162 38357471 -28310534 + AluSp SINE Alu 1 310 -3 983 223 63 7 chr20 38357471 38357716 -28310289 - MER33 DNA MER1_type -2331 254 1 1400 76 0 0 chr20 38358090 38358261 -28309744 + AluY SINE Alu 130 300 -11 1695 98 0 5 chr20 38358285 38358500 -28309505 + AluSq SINE Alu 68 281 -32 516 32 0 0 chr20 38358500 38358562 -28309443 + (GGAA)n Simple_repeat Simple_repeat 3 64 0 2467 84 0 0 chr20 38359571 38359868 -28308137 - AluSg SINE Alu -13 297 1 2401 89 3 7 chr20 38359868 38360172 -28307833 - AluSg SINE Alu -7 303 1 28 0 0 0 chr20 38360181 38360209 -28307796 + AT_rich Low_complexity Low_complexity 1 28 0 2130 142 3 0 chr20 38360789 38361098 -28306907 + AluSx SINE Alu 1 310 -2 194 79 63 48 chr20 38361111 38361174 -28306831 + A-rich Low_complexity Low_complexity 2 65 0 199 361 53 15 chr20 38361176 38361238 -28306767 + MIR3 SINE MIR 31 89 -119 2600 68 0 3 chr20 38361238 38361548 -28306457 - AluY SINE Alu -2 309 1 199 361 53 15 chr20 38361548 38361618 -28306387 + MIR3 SINE MIR 89 168 -40 2072 139 13 23 chr20 38362312 38362622 -28305383 - AluJo SINE Alu -3 309 3 432 225 162 0 chr20 38362633 38362744 -28305261 - FLAM_A SINE Alu -4 129 1 2292 112 23 0 chr20 38363091 38363396 -28304609 + AluSx SINE Alu 1 312 0 2307 128 0 0 chr20 38363445 38363751 -28304254 + AluSx SINE Alu 1 306 -6 251 111 0 0 chr20 38363785 38363821 -28304184 + AluJo SINE Alu 1 36 -265 1612 163 0 12 chr20 38363904 38364162 -28303843 + AluJo SINE Alu 43 297 -15 2243 85 27 7 chr20 38364675 38364968 -28303037 + AluSx SINE Alu 1 299 -13 430 182 13 0 chr20 38365310 38365387 -28302618 + MER91C DNA MER1_type 63 140 0 1010 108 5 88 chr20 38366086 38366280 -28301725 - MLT1A1 LTR MaLR -9 356 179 216 330 61 9 chr20 38367066 38367181 -28300824 - MIR SINE MIR -24 238 118 186 340 165 0 chr20 38367619 38367716 -28300289 + L2 LINE L2 3200 3312 -1 2411 95 13 0 chr20 38371467 38371772 -28296233 + AluSx SINE Alu 1 309 -3 273 313 12 0 chr20 38372535 38372615 -28295390 + MIR SINE MIR 176 256 -6 425 261 72 48 chr20 38373018 38373267 -28294738 - L2 LINE L2 -38 3275 3021 2651 47 0 0 chr20 38373360 38373656 -28294349 + AluY SINE Alu 1 296 -15 2130 106 6 61 chr20 38374253 38374582 -28293423 - AluSx SINE Alu -1 311 1 1828 174 0 3 chr20 38374584 38374889 -28293116 - AluJb SINE Alu -8 304 1 189 0 0 0 chr20 38374891 38374912 -28293093 + (T)n Simple_repeat Simple_repeat 1 21 0 759 189 0 0 chr20 38375160 38375292 -28292713 + FLAM_A SINE Alu 1 132 -1 375 317 70 35 chr20 38375299 38375498 -28292507 + MIR SINE MIR 57 262 0 604 267 52 11 chr20 38375649 38375840 -28292165 - MIR SINE MIR -8 254 56 225 297 95 0 chr20 38376364 38376438 -28291567 - L2 LINE L2 -36 3236 3156 218 341 34 11 chr20 38376467 38376555 -28291450 - L2 LINE L2 -4 3309 3220 1122 165 46 55 chr20 38376572 38376744 -28291261 - MER33 DNA MER1_type -2261 324 155 2031 147 10 0 chr20 38376744 38377036 -28290969 - AluSx SINE Alu -17 295 1 1122 165 46 55 chr20 38377036 38377190 -28290815 - MER33 DNA MER1_type -2430 155 1 226 259 123 25 chr20 38377460 38377541 -28290464 - L2 LINE L2 -2 3311 3223 241 198 94 52 chr20 38377791 38377887 -28290118 + MIR SINE MIR 48 147 -115 2184 116 0 3 chr20 38377912 38378204 -28289801 - AluSg SINE Alu -19 291 1 3219 159 25 21 chr20 38378220 38378595 -28289410 - L1MD3 LINE L1 0 7995 7616 2158 135 3 13 chr20 38378595 38378770 -28289235 - AluSx SINE Alu -4 308 136 2103 138 7 0 chr20 38378770 38379075 -28288930 - AluSx SINE Alu -5 307 1 2158 135 3 13 chr20 38379075 38379210 -28288795 - AluSx SINE Alu -176 136 1 3219 159 25 21 chr20 38379210 38379444 -28288561 - L1MD3 LINE L1 -379 7616 7384 25 31 0 0 chr20 38379454 38379486 -28288519 + AT_rich Low_complexity Low_complexity 1 32 0 2334 121 0 0 chr20 38379670 38379977 -28288028 + AluSx SINE Alu 1 307 -5 415 217 8 31 chr20 38380022 38380151 -28287854 + L1M4 LINE L1 2908 3033 -3113 6788 54 33 48 chr20 38380480 38381448 -28286557 - SVA Other Other 0 1386 433 5977 65 20 69 chr20 38381510 38382421 -28285584 - SVA Other Other -520 866 1 1676 143 98 21 chr20 38382463 38382750 -28285255 - AluJb SINE Alu -3 309 1 842 72 36 0 chr20 38382780 38382978 -28285027 + (TA)n Simple_repeat Simple_repeat 1 205 0 299 83 14 42 chr20 38383021 38383093 -28284912 + (TA)n Simple_repeat Simple_repeat 1 70 0 338 318 54 62 chr20 38383093 38383615 -28284390 - L1MCa LINE L1 -117 6284 1959 373 338 52 66 chr20 38383615 38383964 -28284041 - L1ME4a LINE L1 -124 5997 5654 973 111 20 42 chr20 38383966 38384277 -28283728 + (TA)n Simple_repeat Simple_repeat 1 304 0 1757 177 10 7 chr20 38384279 38384411 -28283594 + AluJb SINE Alu 1 131 -181 2341 105 0 3 chr20 38384411 38384716 -28283289 + AluSg SINE Alu 1 304 -6 1757 177 10 7 chr20 38384716 38384877 -28283128 + AluJb SINE Alu 131 295 -17 2440 100 0 0 chr20 38384915 38385225 -28282780 - AluSx SINE Alu 0 312 3 339 175 0 0 chr20 38385697 38385754 -28282251 - MER91B DNA MER1_type -128 62 6 1764 146 47 75 chr20 38387295 38387444 -28280561 + MLT1A2 LTR MaLR 1 153 -221 2141 94 3 28 chr20 38387444 38387633 -28280372 - AluSx SINE Alu 0 318 138 2457 75 0 7 chr20 38387633 38387941 -28280064 - AluY SINE Alu -5 306 1 2141 94 3 28 chr20 38387941 38388076 -28279929 - AluSx SINE Alu -180 138 1 1764 146 47 75 chr20 38388076 38388310 -28279695 + MLT1A2 LTR MaLR 153 374 0 233 296 0 28 chr20 38389067 38389138 -28278867 - MER115 DNA AcHobo -623 70 2 423 83 0 0 chr20 38389218 38389278 -28278727 + (TCCA)n Simple_repeat Simple_repeat 1 60 0 1634 249 53 59 chr20 38389485 38390047 -28277958 - MLT1G1 LTR MaLR 0 595 37 763 180 0 0 chr20 38390527 38390655 -28277350 + FLAM_A SINE Alu 1 128 -5 530 288 120 27 chr20 38391107 38391482 -28276523 - MLT1J LTR MaLR -7 504 95 29 47 0 0 chr20 38392833 38392876 -28275129 + GC_rich Low_complexity Low_complexity 1 43 0 661 238 63 29 chr20 38393306 38393512 -28274493 - MIR SINE MIR -3 259 47 677 225 0 33 chr20 38393528 38393710 -28274295 + MER5B DNA MER1_type 1 176 -2 266 206 118 0 chr20 38393750 38393818 -28274187 - MER5A DNA MER1_type -6 183 108 1762 169 44 7 chr20 38394098 38394394 -28273611 - AluJb SINE Alu -5 307 1 273 315 56 60 chr20 38394437 38394669 -28273336 + L2 LINE L2 3028 3258 -14 2191 117 0 7 chr20 38395423 38395732 -28272273 - AluSx SINE Alu -5 307 1 233 356 11 0 chr20 38396213 38396300 -28271705 - MIR SINE MIR -102 106 19 1943 142 27 0 chr20 38396432 38396763 -28271242 - MER47A DNA MER2_type -1 365 26 555 173 51 98 chr20 38396895 38397109 -28270896 + MER3 DNA MER1_type 1 204 -5 309 243 49 125 chr20 38397563 38397659 -28270346 - MIR SINE MIR -71 191 108 1633 176 17 10 chr20 38397659 38397948 -28270057 + AluJb SINE Alu 3 293 -19 309 243 49 125 chr20 38397948 38397995 -28270010 - MIR SINE MIR -154 108 59 294 268 115 55 chr20 38398006 38398189 -28269816 + MIR SINE MIR 23 216 -46 2160 94 0 72 chr20 38398239 38398423 -28269582 - AluSx SINE Alu -15 297 144 2364 94 3 0 chr20 38398423 38398731 -28269274 - AluSp SINE Alu -4 309 1 2160 94 0 72 chr20 38398731 38398866 -28269139 - AluSx SINE Alu -168 144 1 214 342 83 8 chr20 38398961 38399081 -28268924 + L2 LINE L2 3139 3267 -5 1149 151 0 0 chr20 38399792 38399964 -28268041 - AluSg/x SINE Alu -7 305 134 2384 99 0 3 chr20 38400190 38400503 -28267502 - AluSx SINE Alu 0 312 1 2332 65 14 10 chr20 38400559 38400851 -28267154 - AluY SINE Alu -18 293 1 2241 131 5 37 chr20 38401114 38401489 -28266516 - THE1B LTR MaLR -1 363 1 188 434 52 7 chr20 38401490 38401626 -28266379 + L2 LINE L2 3127 3268 -4 2248 148 63 10 chr20 38401776 38402188 -28265817 - Tigger2a DNA MER2_type 0 434 1 2323 101 0 3 chr20 38402236 38402542 -28265463 - AluSx SINE Alu -5 307 3 675 208 39 110 chr20 38402599 38402710 -28265295 - MIR SINE MIR -13 249 132 1691 170 3 20 chr20 38402710 38403004 -28265001 - AluJb SINE Alu -23 289 1 675 208 39 110 chr20 38403004 38403147 -28264858 - MIR SINE MIR -130 132 13 346 321 103 5 chr20 38403184 38403368 -28264637 - L1ME LINE L1 -304 5817 5616 2135 98 38 0 chr20 38403724 38404011 -28263994 + AluSg SINE Alu 1 298 -12 198 0 0 0 chr20 38404352 38404374 -28263631 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 394 277 84 7 chr20 38404380 38404535 -28263470 + Charlie8 DNA MER1_type 83 249 -2168 2038 96 4 0 chr20 38404541 38404802 -28263203 - AluSp SINE Alu -43 270 9 1106 227 134 6 chr20 38404808 38405165 -28262840 - MER20B DNA MER1_type -356 427 25 2234 94 7 3 chr20 38405231 38405530 -28262475 - AluSq SINE Alu -1 312 13 2188 121 0 10 chr20 38405782 38406088 -28261917 - AluSq SINE Alu -10 303 1 446 269 0 74 chr20 38406288 38406437 -28261568 + MER5A DNA MER1_type 49 186 -3 419 351 68 55 chr20 38406709 38407108 -28260897 - L2 LINE L2 -47 3225 2822 270 325 79 20 chr20 38407226 38407531 -28260474 + L1M4 LINE L1 4735 5057 -1089 346 209 36 93 chr20 38407554 38407601 -28260404 + MER112 DNA MER1_type 6 54 -206 2265 93 24 0 chr20 38407601 38407891 -28260114 + AluSp SINE Alu 2 298 -15 346 209 36 93 chr20 38407891 38407982 -28260023 + MER112 DNA MER1_type 54 136 -124 1009 193 24 28 chr20 38409001 38409213 -28258792 - AluJb SINE Alu -17 295 85 1461 79 0 0 chr20 38409827 38410004 -28258001 - AluSx SINE Alu -14 298 122 2475 74 0 7 chr20 38410013 38410323 -28257682 - AluY SINE Alu -3 308 1 2209 97 3 13 chr20 38410325 38410625 -28257380 - AluSp SINE Alu -16 297 1 933 141 0 0 chr20 38410625 38410760 -28257245 - AluSx SINE Alu -178 135 1 779 300 128 43 chr20 38410926 38411372 -28256633 - L3 LINE CR1 -666 911 428 308 358 9 9 chr20 38411425 38411534 -28256471 + MIR SINE MIR 38 146 -62 508 302 69 25 chr20 38411625 38411827 -28256178 - L3 LINE CR1 -1178 399 189 247 374 8 24 chr20 38411847 38411970 -28256035 + L3 LINE CR1 484 604 -973 23 33 0 0 chr20 38412224 38412254 -28255751 + AT_rich Low_complexity Low_complexity 1 30 0 2155 96 4 0 chr20 38414164 38414474 -28253531 + AluSx SINE Alu 1 311 0 741 232 55 0 chr20 38415234 38415398 -28252607 - MER58A DNA MER1_type -22 202 30 242 245 0 0 chr20 38415399 38415448 -28252557 - MER58A DNA MER1_type -40 67 19 315 281 12 37 chr20 38416827 38416909 -28251096 - L2 LINE L2 0 3272 3193 2217 110 23 3 chr20 38417609 38417910 -28250095 + AluSx SINE Alu 1 307 -5 512 290 0 88 chr20 38418709 38418949 -28249056 + MIR SINE MIR 26 243 -19 233 236 0 0 chr20 38419818 38419873 -28248132 - HAL1b LINE L1 -191 1157 1103 22 0 0 0 chr20 38419878 38419900 -28248105 + AT_rich Low_complexity Low_complexity 1 22 0 6183 132 89 8 chr20 38420003 38421106 -28246899 + Tigger1 DNA MER2_type 1 1192 -1226 923 162 58 0 chr20 38421145 38421299 -28246706 + AluJb SINE Alu 1 163 -149 1350 171 0 9 chr20 38421303 38421519 -28246486 - AluSx SINE Alu -97 215 2 4173 134 8 38 chr20 38421543 38422312 -28245693 + Tigger2 DNA MER2_type 1 746 -1972 1825 115 6 64 chr20 38422408 38422721 -28245284 - AluSx SINE Alu -17 295 1 361 197 71 25 chr20 38422722 38422811 -28245194 - FAM SINE Alu -138 177 152 325 68 288 0 chr20 38422811 38422870 -28245135 + MADE1 DNA Mariner 1 76 -4 361 197 71 25 chr20 38422870 38422919 -28245086 - FAM SINE Alu -163 152 107 1161 150 79 4 chr20 38422931 38423158 -28244847 + Tigger2 DNA MER2_type 2465 2708 -10 4314 130 24 48 chr20 38423183 38423740 -28244265 + Tigger1 DNA MER2_type 1610 2142 -276 5406 108 53 9 chr20 38423740 38425374 -28242631 + L1PA16 LINE L1 4488 6159 -7 4314 130 24 48 chr20 38425374 38425645 -28242360 + Tigger1 DNA MER2_type 2142 2418 0 356 189 72 27 chr20 38425645 38425756 -28242249 - L1MC5 LINE L1 -238 7723 7608 262 246 33 0 chr20 38425770 38425831 -28242174 - MER2 DNA MER2_type -16 329 267 941 163 12 6 chr20 38425919 38426091 -28241914 - MER2 DNA MER2_type -172 173 1 1912 164 7 7 chr20 38426104 38426409 -28241596 - AluJb SINE Alu -7 305 1 551 189 131 23 chr20 38426409 38426584 -28241421 - L1MC5 LINE L1 -461 7500 7307 466 121 0 0 chr20 38426767 38426833 -28241172 + AluJ/FLAM SINE Alu 1 66 -246 484 286 107 16 chr20 38426932 38427184 -28240821 - L1ME4a LINE L1 -97 6024 5750 1641 166 3 40 chr20 38427193 38427494 -28240511 - AluJb SINE Alu -17 295 6 819 148 0 0 chr20 38427501 38427629 -28240376 - FRAM SINE Alu 0 40 1 221 258 42 8 chr20 38427907 38428027 -28239978 + (TA)n Simple_repeat Simple_repeat 2 125 0 31 58 0 0 chr20 38428361 38428413 -28239592 + AT_rich Low_complexity Low_complexity 1 52 0 654 130 8 49 chr20 38428592 38428715 -28239290 - L1MA5A LINE L1 -2 6295 6178 453 66 0 0 chr20 38429931 38429992 -28238013 + (CA)n Simple_repeat Simple_repeat 2 62 0 740 156 8 8 chr20 38430001 38430123 -28237882 - FLAM_C SINE Alu -21 122 1 2739 13 0 0 chr20 38430444 38430747 -28237258 + AluYa5 SINE Alu 1 303 -8 801 231 134 41 chr20 38430775 38431065 -28236940 - MLT1J1 LTR MaLR -126 320 4 300 340 48 55 chr20 38431068 38431141 -28236864 - L1M4 LINE L1 -1547 4599 4527 5237 60 15 9 chr20 38431141 38431804 -28236201 - SVA Other Other 0 1386 720 300 340 48 55 chr20 38431804 38432001 -28236004 - L1M4 LINE L1 -1619 4527 4331 573 236 142 40 chr20 38432144 38432369 -28235636 + MIR SINE MIR 15 262 0 2455 84 0 3 chr20 38432564 38432875 -28235130 - AluY SINE Alu -1 310 1 34 0 0 22 chr20 38432878 38432901 -28235104 + AT_rich Low_complexity Low_complexity 1 24 -20 1390 150 36 123 chr20 38432901 38433037 -28234968 + AluYb8 SINE Alu 1 147 -171 1861 73 102 0 chr20 38433037 38433282 -28234723 + AluSx SINE Alu 1 270 -42 1390 150 36 123 chr20 38433282 38433478 -28234527 + AluYb8 SINE Alu 147 304 -14 34 0 0 22 chr20 38433478 38433499 -28234506 + AT_rich Low_complexity Low_complexity 24 44 0 361 285 35 12 chr20 38433509 38433681 -28234324 - L1M4 LINE L1 -2212 3934 3759 993 167 22 33 chr20 38435535 38435715 -28232290 - FRAM SINE Alu 0 176 1 587 61 0 24 chr20 38436372 38436454 -28231551 - MADE1 DNA Mariner 0 80 1 845 268 146 22 chr20 38436774 38437218 -28230787 - MLT1J LTR MaLR -12 499 1 24 32 0 0 chr20 38438130 38438161 -28229844 + AT_rich Low_complexity Low_complexity 1 31 0 196 247 0 78 chr20 38438542 38438619 -28229386 - MIR SINE MIR -1 261 191 198 0 0 0 chr20 38440340 38440362 -28227643 + (T)n Simple_repeat Simple_repeat 1 22 0 267 335 85 39 chr20 38442121 38442402 -28225603 + L2 LINE L2 2401 2694 -620 1334 85 0 0 chr20 38442819 38442983 -28225022 + AluSg/x SINE Alu 133 296 -16 213 324 0 27 chr20 38443294 38443368 -28224637 - L2 LINE L2 -930 2384 2313 * 259 163 41 0 chr20 38443363 38443412 -28224593 - L2 LINE L2 -4 3309 3259 256 310 271 11 chr20 38443432 38443883 -28224122 - L2 LINE L2 -990 2324 1757 283 188 12 36 chr20 38446088 38446254 -28221751 + CT-rich Low_complexity Low_complexity 1 161 0 396 0 0 0 chr20 38448161 38448205 -28219800 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1599 178 11 0 chr20 38448208 38448484 -28219521 - AluJo SINE Alu -33 279 1 1955 163 0 3 chr20 38448502 38448797 -28219208 - AluSx SINE Alu -18 294 1 1223 136 26 84 chr20 38448853 38449090 -28218915 - Tigger2 DNA MER2_type -1 2717 2468 1828 125 62 0 chr20 38449090 38449362 -28218643 + AluSq SINE Alu 24 312 -1 2110 87 3 40 chr20 38449370 38449669 -28218336 + AluSg1 SINE Alu 5 292 -17 1223 136 26 84 chr20 38449669 38449695 -28218310 - Tigger2 DNA MER2_type -231 2487 2461 2790 143 26 16 chr20 38449748 38450238 -28217767 - Tigger2 DNA MER2_type -1976 742 248 804 163 0 15 chr20 38450238 38450373 -28217632 - FLAM_C SINE Alu 0 133 1 2247 115 16 3 chr20 38450402 38450706 -28217299 - AluSg SINE Alu -2 308 1 661 156 135 0 chr20 38450707 38450848 -28217157 - Tigger2 DNA MER2_type -2557 161 2 2155 86 0 7 chr20 38451851 38452172 -28215833 - AluY SINE Alu 0 311 1 2412 96 0 0 chr20 38453672 38453984 -28214021 + AluSx SINE Alu 1 312 0 1956 138 28 0 chr20 38455409 38455700 -28212305 - AluSx SINE Alu -13 299 1 3358 182 38 1 chr20 38455796 38456454 -28211551 - L1MB5 LINE L1 -9 6165 5484 303 235 0 0 chr20 38456826 38456894 -28211111 + L1ME1 LINE L1 610 677 -5719 * 952 219 47 36 chr20 38456891 38457170 -28210835 + L1ME1 LINE L1 4782 5063 -1152 577 135 198 36 chr20 38457172 38457283 -28210722 + FLAM_C SINE Alu 1 129 -14 1033 194 105 0 chr20 38457284 38457542 -28210463 + L1ME1 LINE L1 5081 5365 -850 3110 198 64 32 chr20 38458379 38459220 -28208785 + L1ME1 LINE L1 5356 6383 -20 1813 105 45 0 chr20 38462444 38462691 -28205314 + AluSc SINE Alu 34 291 -18 996 314 180 31 chr20 38463863 38464284 -28203721 - L3 LINE CR1 -9 1568 1211 2140 127 0 3 chr20 38464284 38464584 -28203421 - AluSx SINE Alu -13 299 1 996 314 180 31 chr20 38464584 38465036 -28202969 - L3 LINE CR1 -366 1211 565 203 242 30 38 chr20 38465052 38465184 -28202821 + (ATATG)n Simple_repeat Simple_repeat 3 133 0 357 192 77 0 chr20 38465184 38465262 -28202743 - MIR SINE MIR -82 180 97 248 333 66 76 chr20 38466542 38466951 -28201054 + L2 LINE L2 2354 2758 -556 345 303 148 25 chr20 38467144 38467306 -28200699 - MIR3 SINE MIR -11 197 16 322 169 15 15 chr20 38468144 38468209 -28199796 - MER113 DNA MER1_type? 0 521 457 228 290 199 30 chr20 38468719 38468856 -28199149 + MER5B DNA MER1_type 5 175 -14 1757 186 0 20 chr20 38469043 38469344 -28198661 - AluJo SINE Alu -17 295 1 35 0 0 0 chr20 38469344 38469379 -28198626 + AT_rich Low_complexity Low_complexity 1 35 0 288 77 0 0 chr20 38469379 38469418 -28198587 + (CA)n Simple_repeat Simple_repeat 2 40 0 294 200 40 40 chr20 38469510 38469610 -28198395 - L1ME4a LINE L1 -58 6063 5964 3419 34 0 0 chr20 38469710 38470120 -28197885 + L1PA3 LINE L1 5743 6152 -3 275 258 172 48 chr20 38471409 38471595 -28196410 - L2 LINE L2 -776 2538 2330 2240 105 0 13 chr20 38471956 38472260 -28195745 - AluSq SINE Alu -13 300 1 836 122 23 15 chr20 38473479 38473610 -28194395 + FLAM_C SINE Alu 2 133 0 702 275 40 36 chr20 38474358 38474580 -28193425 + MIR SINE MIR 40 262 0 1791 149 7 43 chr20 38474611 38474913 -28193092 + AluJo SINE Alu 1 291 -21 205 302 32 16 chr20 38474931 38474994 -28193011 - MIR SINE MIR -56 152 89 256 313 0 53 chr20 38475647 38475778 -28192227 + L1M4 LINE L1 3694 3817 -2329 307 248 179 0 chr20 38476066 38476183 -28191822 - L1MD1 LINE L1 -8 6234 6097 21 0 0 0 chr20 38476281 38476302 -28191703 + AT_rich Low_complexity Low_complexity 1 21 0 900 234 53 0 chr20 38476606 38476832 -28191173 + MER46C DNA MER2_type 1 238 -100 4128 143 42 36 chr20 38477001 38477815 -28190190 - L1MC2 LINE L1 0 6344 5526 341 264 190 19 chr20 38477848 38478064 -28189941 + L1ME4a LINE L1 5866 6118 -3 950 168 96 65 chr20 38478325 38478761 -28189244 - LTR56 LTR ERV1 0 445 11 2194 112 3 0 chr20 38479228 38479524 -28188481 + AluSx SINE Alu 1 297 -15 233 330 0 47 chr20 38479963 38480069 -28187936 - L2 LINE L2 -49 3264 3164 2297 64 10 3 chr20 38480860 38481155 -28186850 + AluY SINE Alu 1 297 -14 372 331 26 13 chr20 38481295 38481446 -28186559 - MER5A DNA MER1_type 0 189 37 1027 205 38 5 chr20 38481520 38481730 -28186275 - MER20 DNA MER1_type -2 217 1 219 286 76 29 chr20 38481915 38482020 -28185985 + L2 LINE L2 3123 3232 -81 383 184 66 0 chr20 38482094 38482170 -28185835 - MIR SINE MIR -106 156 76 1257 206 82 4 chr20 38482619 38482886 -28185119 + AluJo SINE Alu 1 288 -24 325 257 19 9 chr20 38483487 38483592 -28184413 - MLT1K LTR MaLR 0 588 483 965 193 11 0 chr20 38484040 38484216 -28183789 + MER58A DNA MER1_type 46 223 -1 21 0 0 0 chr20 38484281 38484302 -28183703 + AT_rich Low_complexity Low_complexity 1 21 0 453 245 19 0 chr20 38484641 38484796 -28183209 + CT-rich Low_complexity Low_complexity 2 159 0 186 43 0 0 chr20 38484797 38484820 -28183185 + (CCTG)n Simple_repeat Simple_repeat 2 24 0 23 54 0 0 chr20 38484970 38485007 -28182998 + AT_rich Low_complexity Low_complexity 1 37 0 544 185 104 7 chr20 38486655 38486790 -28181215 + MER58C DNA MER1_type 68 215 0 21 0 0 0 chr20 38487170 38487191 -28180814 + AT_rich Low_complexity Low_complexity 1 21 0 1456 228 18 23 chr20 38488077 38488512 -28179493 + L1M4 LINE L1 3867 4299 -1847 774 196 165 20 chr20 38488523 38488778 -28179227 + MLT1E1 LTR MaLR 2 293 -361 247 284 78 17 chr20 38489208 38489324 -28178681 + L3b LINE CR1 1290 1412 -171 223 305 117 31 chr20 38489959 38490087 -28177918 + MIR SINE MIR 101 239 -23 4462 172 26 26 chr20 38490842 38491789 -28176216 - L1MA10 LINE L1 0 6334 5388 226 251 85 106 chr20 38492161 38492335 -28175670 - MIR SINE MIR -67 141 5 460 298 164 4 chr20 38492525 38492787 -28175218 - L1MC4 LINE L1 -157 7885 7582 25 0 0 0 chr20 38492893 38492918 -28175087 + AT_rich Low_complexity Low_complexity 1 25 0 591 80 0 0 chr20 38492934 38493009 -28174996 - AluJb SINE Alu -199 113 39 309 118 0 0 chr20 38497514 38497565 -28170440 + (CA)n Simple_repeat Simple_repeat 2 52 0 200 59 29 0 chr20 38497862 38497896 -28170109 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 304 114 0 0 chr20 38498236 38498280 -28169725 + L2 LINE L2 3261 3304 -9 238 333 62 62 chr20 38499833 38499962 -28168043 - MER5A DNA MER1_type -7 182 54 606 257 82 20 chr20 38500333 38500578 -28167427 + Charlie8 DNA MER1_type 15 274 -2143 208 154 26 0 chr20 38501016 38501055 -28166950 + (CAGCC)n Simple_repeat Simple_repeat 1 40 0 452 310 9 0 chr20 38501551 38501664 -28166341 - MER91A DNA MER1_type -81 115 2 1744 152 67 0 chr20 38501944 38502214 -28165791 + AluJb SINE Alu 2 289 -23 2411 105 0 0 chr20 38502627 38502933 -28165072 - AluSq SINE Alu -7 306 1 548 290 45 0 chr20 38502958 38503134 -28164871 - MIR SINE MIR 0 262 79 670 257 86 0 chr20 38503149 38503336 -28164669 + MIR SINE MIR 36 238 -24 335 299 188 3 chr20 38504369 38504558 -28163447 + MIR SINE MIR 36 252 -10 2472 65 3 0 chr20 38504599 38504890 -28163115 - AluSc SINE Alu -17 292 1 243 288 162 0 chr20 38504912 38505023 -28162982 - MIR SINE MIR -2 260 132 437 239 49 48 chr20 38506264 38506530 -28161475 + L2 LINE L2 2966 3311 -2 180 0 0 0 chr20 38506535 38506555 -28161450 + (TTA)n Simple_repeat Simple_repeat 1 20 0 217 349 83 0 chr20 38506570 38506679 -28161326 - MIR SINE MIR -18 244 127 361 272 152 62 chr20 38506745 38507054 -28160951 + L2 LINE L2 2168 2504 -810 686 199 141 0 chr20 38507276 38507432 -28160573 + MER45A DNA AcHobo 1 178 0 2246 131 0 10 chr20 38507539 38507853 -28160152 - AluSx SINE Alu -1 311 1 686 258 74 62 chr20 38508554 38508619 -28159386 - MIR SINE MIR -9 253 190 2170 123 13 3 chr20 38508619 38508921 -28159084 + AluSx SINE Alu 1 305 -7 686 258 74 62 chr20 38508921 38509099 -28158906 - MIR SINE MIR -72 190 7 601 178 0 11 chr20 38509754 38509928 -28158077 + (CA)n Simple_repeat Simple_repeat 2 173 0 693 197 4 8 chr20 38509963 38510467 -28157538 + (CA)n Simple_repeat Simple_repeat 1 501 0 204 184 0 0 chr20 38510546 38510595 -28157410 + (CA)n Simple_repeat Simple_repeat 2 50 0 210 150 0 0 chr20 38511127 38511167 -28156838 + (CA)n Simple_repeat Simple_repeat 1 40 0 561 229 78 0 chr20 38511239 38511392 -28156613 - MIR SINE MIR -29 233 69 989 240 56 78 chr20 38511801 38512209 -28155796 - MLT1C LTR MaLR 0 467 69 2695 76 100 5 chr20 38512211 38512620 -28155385 - LTR7 LTR ERV1 -2 448 1 2233 97 39 39 chr20 38512620 38513010 -28154995 - HERVH LTR ERV1 0 7713 7324 1343 105 53 0 chr20 38513010 38513219 -28154786 - HERVH LTR ERV1 -1894 5819 5600 4037 122 64 0 chr20 38513220 38513842 -28154163 - HERVH LTR ERV1 -2564 5149 4488 15950 148 23 27 chr20 38513844 38518201 -28149804 - HERVH LTR ERV1 -2882 3647 1 2722 78 92 5 chr20 38518203 38518615 -28149390 - LTR7 LTR ERV1 -2 448 1 269 128 39 103 chr20 38518615 38518693 -28149312 - MLT1C LTR MaLR -394 73 1 243 232 0 0 chr20 38518706 38518762 -28149243 + MIR SINE MIR 172 227 -35 1795 160 0 19 chr20 38518802 38519109 -28148896 + AluJb SINE Alu 1 301 -11 600 260 53 6 chr20 38519142 38519311 -28148694 - MIR SINE MIR -28 234 58 414 323 0 0 chr20 38519854 38519981 -28148024 + (CTCA)n Simple_repeat Simple_repeat 1 127 0 423 165 0 0 chr20 38519990 38520075 -28147930 + (TCCA)n Simple_repeat Simple_repeat 3 87 0 243 125 0 0 chr20 38520151 38520191 -28147814 + (TCCA)n Simple_repeat Simple_repeat 1 40 0 254 191 0 0 chr20 38521285 38521332 -28146673 - MIR SINE MIR -108 154 108 322 296 152 0 chr20 38521960 38522092 -28145913 - MIR SINE MIR -79 183 32 390 300 54 38 chr20 38522481 38522794 -28145211 - L1MC4a LINE L1 -114 6007 5688 838 50 22 22 chr20 38523217 38523356 -28144649 + (TCTA)n Simple_repeat Simple_repeat 4 142 0 225 108 27 0 chr20 38523356 38523393 -28144612 - MLT1D LTR MaLR -7 498 461 183 42 0 0 chr20 38523400 38523424 -28144581 + (TC)n Simple_repeat Simple_repeat 1 24 0 2079 165 80 49 chr20 38523427 38523917 -28144088 - MLT1D LTR MaLR 0 505 1 192 152 0 0 chr20 38523943 38523976 -28144029 + (TCTA)n Simple_repeat Simple_repeat 4 36 0 2453 91 0 0 chr20 38524213 38524509 -28143496 - AluSg SINE Alu -14 296 1 22 35 0 0 chr20 38524544 38524573 -28143432 + AT_rich Low_complexity Low_complexity 1 29 0 251 267 47 23 chr20 38524963 38525049 -28142956 + L2 LINE L2 3225 3312 -1 703 268 102 54 chr20 38525624 38525699 -28142306 - L1MC4a LINE L1 -298 5823 5753 1433 166 116 22 chr20 38525699 38525976 -28142029 - AluJo SINE Alu -9 303 1 703 268 102 54 chr20 38525976 38526413 -28141592 - L1MC4a LINE L1 -368 5753 5373 819 241 14 18 chr20 38526711 38526931 -28141074 + MIR SINE MIR 42 260 -2 221 307 148 0 chr20 38527031 38527119 -28140886 + MIR SINE MIR 45 145 -63 400 289 74 36 chr20 38527537 38527941 -28140064 - L1MC4a LINE L1 -753 5393 5111 182 282 141 0 chr20 38528395 38528466 -28139539 - MIR SINE MIR -171 91 11 1630 205 74 44 chr20 38528509 38528990 -28139015 - MLT1D LTR MaLR -4 485 4 957 179 0 0 chr20 38529085 38529253 -28138752 - MER5A DNA MER1_type -21 168 1 612 301 126 23 chr20 38529260 38529649 -28138356 - L2 LINE L2 -1 3271 2843 1602 188 33 9 chr20 38530218 38530554 -28137451 - MER4D LTR ERV1 -11 892 549 1636 149 0 55 chr20 38530590 38530695 -28137310 - MER49 LTR ERV1 -630 293 184 2284 111 20 0 chr20 38530695 38531001 -28137004 - AluSx SINE Alu 0 312 1 1636 149 0 55 chr20 38531001 38531203 -28136802 - MER49 LTR ERV1 -739 184 3 1910 155 0 56 chr20 38531229 38531400 -28136605 - AluJo SINE Alu -8 304 158 2288 73 21 10 chr20 38531400 38531689 -28136316 - AluY SINE Alu -19 292 1 1910 155 0 56 chr20 38531689 38531839 -28136166 - AluJo SINE Alu -154 158 1 1245 166 46 14 chr20 38531885 38532168 -28135837 - Charlie5 DNA MER1_type -85 2527 2236 2053 146 13 0 chr20 38532207 38532550 -28135455 + AluSx SINE Alu 1 347 0 385 167 107 36 chr20 38532567 38532651 -28135354 - Charlie5 DNA MER1_type -2521 91 2 444 245 37 75 chr20 38532799 38532987 -28135018 - Charlie8 DNA MER1_type -2185 232 52 354 319 108 25 chr20 38533238 38533395 -28134610 - MER5B DNA MER1_type -6 172 3 235 198 37 123 chr20 38533898 38533979 -28134026 + MER91B DNA MER1_type 2 75 -115 195 42 0 0 chr20 38534161 38534185 -28133820 + (TTTC)n Simple_repeat Simple_repeat 2 25 0 688 232 122 0 chr20 38536361 38536542 -28131463 + MIR SINE MIR 5 207 -55 886 196 43 14 chr20 38536542 38536751 -28131254 + MER20 DNA MER1_type 1 215 -4 567 134 0 0 chr20 38536751 38536860 -28131145 - AluSg/x SINE Alu 0 308 200 300 373 0 0 chr20 38537252 38537370 -28130635 - MIR3 SINE MIR -49 159 42 272 160 20 0 chr20 38537699 38537749 -28130256 + L2 LINE L2 3263 3313 0 368 319 21 21 chr20 38537772 38537916 -28130089 - MIR SINE MIR -102 160 17 2124 101 7 36 chr20 38537916 38538222 -28129783 - AluSg SINE Alu -13 297 1 1178 262 43 18 chr20 38538265 38538760 -28129245 - MLT1G LTR MaLR -22 549 4 281 233 0 0 chr20 38538778 38538838 -28129167 - L2 LINE L2 -32 3281 3222 241 256 247 27 chr20 38539149 38539368 -28128637 - L2 LINE L2 -667 2647 2381 383 328 81 34 chr20 38539440 38539620 -28128385 + MIR SINE MIR 7 202 -60 1382 196 87 0 chr20 38539620 38539895 -28128110 + AluJo SINE Alu 1 299 -13 383 328 81 34 chr20 38539895 38539949 -28128056 + MIR SINE MIR 202 252 -10 225 274 32 0 chr20 38539977 38540039 -28127966 + L1ME3A LINE L1 6107 6170 0 703 221 27 0 chr20 38540738 38540887 -28127118 - MER45A DNA AcHobo -24 154 2 321 205 184 47 chr20 38541082 38541231 -28126774 + L1ME LINE L1 5605 5776 -345 1936 159 3 3 chr20 38541587 38541910 -28126095 + AluJb SINE Alu 1 312 0 26 0 0 0 chr20 38541914 38541940 -28126065 + AT_rich Low_complexity Low_complexity 1 26 0 431 288 14 14 chr20 38543468 38543607 -28124398 + L2 LINE L2 2591 2729 -585 497 108 12 24 chr20 38543616 38543699 -28124306 - L2 LINE L2 -6 3307 3226 209 226 0 0 chr20 38543740 38543793 -28124212 + L2 LINE L2 2727 2779 -535 1164 237 101 30 chr20 38543806 38544314 -28123691 - MLT1G3 LTR MaLR -8 559 1 1248 302 30 4 chr20 38544334 38544794 -28123211 + L2 LINE L2 2805 3276 -37 2221 137 0 6 chr20 38545220 38545534 -28122471 - AluSx SINE Alu 0 312 1 514 274 19 23 chr20 38545584 38545799 -28122206 - MER113 DNA MER1_type? -307 214 1 428 294 7 20 chr20 38546140 38546293 -28121712 + MER5A DNA MER1_type 1 151 -38 434 174 17 11 chr20 38547131 38547309 -28120696 + (TG)n Simple_repeat Simple_repeat 1 179 0 548 154 23 0 chr20 38547347 38547522 -28120483 + (TG)n Simple_repeat Simple_repeat 2 180 0 1362 190 113 72 chr20 38547688 38548088 -28119917 - MER66A LTR ERV1 0 478 63 2528 51 0 0 chr20 38548125 38548419 -28119586 - AluY SINE Alu -17 294 1 595 283 17 6 chr20 38548515 38548695 -28119310 + MIR SINE MIR 4 185 -77 191 167 17 150 chr20 38549580 38549640 -28118365 - L2 LINE L2 0 3272 3221 213 121 0 0 chr20 38549831 38549864 -28118141 + (TCCC)n Simple_repeat Simple_repeat 2 34 0 1963 173 0 3 chr20 38549867 38550336 -28117669 - AluJo SINE Alu 0 468 1 238 213 25 12 chr20 38550574 38550654 -28117351 - L1ME3 LINE L1 -123 6039 5959 1974 151 24 0 chr20 38550848 38551146 -28116859 + AluJo SINE Alu 4 308 -4 1948 103 157 16 chr20 38551152 38551471 -28116534 - THE1B LTR MaLR 0 364 1 318 265 78 10 chr20 38551648 38551750 -28116255 - L1MD3 LINE L1 -22 7973 7865 2165 126 7 0 chr20 38551763 38552079 -28115926 - AluSx SINE Alu 0 318 1 2529 58 3 0 chr20 38552083 38552376 -28115629 - AluY SINE Alu -17 294 1 1705 153 10 49 chr20 38552509 38552656 -28115349 + AluJo SINE Alu 1 133 -179 2297 118 0 0 chr20 38552656 38552952 -28115053 + AluSx SINE Alu 1 296 -16 1705 153 10 49 chr20 38552952 38553092 -28114913 + AluJo SINE Alu 133 277 -35 612 274 158 14 chr20 38553242 38553457 -28114548 - MIR SINE MIR -16 246 1 262 292 71 67 chr20 38553802 38553893 -28114112 - MIR SINE MIR -14 248 159 1992 153 0 0 chr20 38553893 38554187 -28113818 + AluJb SINE Alu 9 302 -10 262 292 71 67 chr20 38554187 38554335 -28113670 - MIR SINE MIR -103 159 8 2538 85 0 0 chr20 38554688 38554995 -28113010 - AluSc SINE Alu -2 307 1 280 226 0 12 chr20 38555030 38555114 -28112891 - L1ME4a LINE L1 0 6121 6039 1895 144 4 0 chr20 38555201 38555479 -28112526 + AluJb SINE Alu 5 283 -29 249 225 180 15 chr20 38555605 38555739 -28112266 - MLT1I LTR MaLR 0 536 289 538 268 118 35 chr20 38555760 38556014 -28111991 - MLT1H LTR MaLR -245 304 30 370 250 27 76 chr20 38556042 38556066 -28111939 - L1ME4a LINE L1 -278 5843 5819 1982 168 0 3 chr20 38556066 38556376 -28111629 - AluJb SINE Alu -1 311 3 370 250 27 76 chr20 38556376 38556642 -28111363 - L1ME4a LINE L1 -302 5819 5483 200 31 62 0 chr20 38556647 38556679 -28111326 + (GTTTG)n Simple_repeat Simple_repeat 1 34 0 2299 112 0 10 chr20 38556960 38557264 -28110741 - AluSq SINE Alu -12 301 1 281 298 11 11 chr20 38557693 38557787 -28110218 + MIR SINE MIR 8 101 -161 234 62 0 0 chr20 38557788 38557820 -28110185 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2269 73 7 21 chr20 38557843 38558163 -28109842 + AluY SINE Alu 1 316 0 535 72 0 0 chr20 38558176 38558245 -28109760 - FLAM SINE Alu -18 125 57 303 296 88 19 chr20 38558296 38558455 -28109550 + MIR SINE MIR 93 262 0 457 228 29 31 chr20 38558849 38558993 -28109012 - MIR SINE MIR -21 241 98 1956 164 0 16 chr20 38559904 38560337 -28107668 - AluJo SINE Alu 0 428 1 546 355 70 10 chr20 38560460 38560877 -28107128 + L2 LINE L2 2829 3270 -2 285 169 0 0 chr20 38560881 38560940 -28107065 + GA-rich Low_complexity Low_complexity 4 62 0 207 0 0 0 chr20 38561695 38561718 -28106287 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 408 269 31 38 chr20 38561875 38562035 -28105970 + MER103 DNA DNA 8 166 0 201 350 0 50 chr20 38562230 38562330 -28105675 + MIR SINE MIR 108 202 -60 380 130 14 0 chr20 38562392 38562461 -28105544 + CT-rich Low_complexity Low_complexity 1 70 0 303 85 0 0 chr20 38562522 38562569 -28105436 + (TCCA)n Simple_repeat Simple_repeat 2 48 0 380 213 103 98 chr20 38562585 38562674 -28105331 + MIR SINE MIR 65 152 -110 2202 133 0 16 chr20 38562674 38562991 -28105014 + AluSx SINE Alu 1 312 0 380 213 103 98 chr20 38562991 38563075 -28104930 + MIR SINE MIR 152 239 -23 500 245 92 38 chr20 38564027 38564211 -28103794 + L1MCc LINE L1 834 1027 -5396 502 195 8 8 chr20 38564357 38564485 -28103520 + (CCCA)n Simple_repeat Simple_repeat 1 128 0 476 240 0 6 chr20 38564558 38564733 -28103272 + (TCCA)n Simple_repeat Simple_repeat 1 174 0 244 289 27 117 chr20 38564810 38565066 -28102939 + L2 LINE L2 2827 3059 -213 315 296 53 83 chr20 38567133 38567182 -28100823 - L2 LINE L2 0 3272 3223 2140 116 0 7 chr20 38567182 38567508 -28100497 - AluSx SINE Alu 0 324 1 315 296 53 83 chr20 38567508 38567626 -28100379 - L2 LINE L2 -49 3223 3109 195 220 95 38 chr20 38567702 38567814 -28100191 - L2 LINE L2 -333 2980 2867 312 336 42 0 chr20 38567899 38568018 -28099987 - MIR3 SINE MIR -37 171 48 478 189 322 7 chr20 38568968 38569111 -28098894 - MER5A DNA MER1_type -1 188 1 1059 263 69 26 chr20 38569112 38569534 -28098471 - LTR16A1 LTR ERVL -17 440 1 1598 251 64 21 chr20 38570896 38571367 -28096638 - LTR16C LTR ERVL 0 491 1 687 201 0 0 chr20 38571400 38571579 -28096426 + (ATG)n Simple_repeat Simple_repeat 1 179 0 747 181 0 0 chr20 38571616 38571771 -28096234 + (ATG)n Simple_repeat Simple_repeat 1 155 0 521 238 150 19 chr20 38571880 38572040 -28095965 - MIR SINE MIR -15 247 67 367 291 132 7 chr20 38572385 38572524 -28095481 - MIR SINE MIR -65 143 20 204 298 50 8 chr20 38572674 38572795 -28095210 + L2 LINE L2 2477 2602 -712 747 215 0 0 chr20 38572804 38573027 -28094978 + (ATGGTG)n Simple_repeat Simple_repeat 1 223 0 699 211 0 0 chr20 38573033 38573204 -28094801 + (TGG)n Simple_repeat Simple_repeat 3 173 0 1129 292 84 36 chr20 38573269 38573924 -28094081 + L2 LINE L2 2605 3297 -16 306 73 0 0 chr20 38573927 38573968 -28094037 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr20 38574103 38574124 -28093881 + AT_rich Low_complexity Low_complexity 1 21 0 1328 221 54 57 chr20 38574591 38574980 -28093025 + MLT1B LTR MaLR 1 388 -2 618 288 72 8 chr20 38575283 38575533 -28092472 - L2 LINE L2 -3 3310 3045 847 259 65 7 chr20 38575533 38575827 -28092178 - LTR16C LTR ERVL -1 490 180 332 271 8 16 chr20 38575958 38576080 -28091925 - L2 LINE L2 -251 3062 2942 754 135 14 7 chr20 38576210 38576351 -28091654 + CT-rich Low_complexity Low_complexity 1 142 0 664 200 45 0 chr20 38576883 38577038 -28090967 - LTR16C LTR ERVL -1 490 329 464 258 52 70 chr20 38577072 38577203 -28090802 - LTR16C LTR ERVL -146 345 218 1914 140 9 44 chr20 38577203 38577518 -28090487 + AluJo SINE Alu 1 304 -8 464 258 52 70 chr20 38577518 38577615 -28090390 - LTR16C LTR ERVL -273 218 121 412 324 102 19 chr20 38578152 38578523 -28089482 - L2 LINE L2 -55 3258 2857 2013 155 0 0 chr20 38579710 38580013 -28087992 + AluJo SINE Alu 5 307 -5 1595 182 70 0 chr20 38580893 38581179 -28086826 + AluJo SINE Alu 7 312 0 432 97 0 0 chr20 38581291 38581363 -28086642 - Alu SINE Alu -3 309 238 1693 112 46 14 chr20 38581616 38581901 -28086104 + L1PA16 LINE L1 5863 6156 -10 1964 143 0 31 chr20 38581901 38582195 -28085810 + AluJo SINE Alu 1 285 -27 198 0 0 0 chr20 38582195 38582217 -28085788 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 202 318 24 35 chr20 38582232 38582317 -28085688 - L2 LINE L2 -5 3267 3184 375 185 11 33 chr20 38582455 38582547 -28085458 + L1MB4 LINE L1 6074 6163 -17 213 39 0 0 chr20 38582560 38582586 -28085419 + (TA)n Simple_repeat Simple_repeat 1 26 0 2281 78 11 0 chr20 38582586 38582869 -28085136 - AluSp SINE Alu -27 286 1 1153 142 46 0 chr20 38582879 38583097 -28084908 - L1MB3 LINE L1 -3 6180 5953 1386 109 0 6 chr20 38583100 38583283 -28084722 - AluSg/x SINE Alu -10 302 121 422 296 61 8 chr20 38583290 38583422 -28084583 - L2 LINE L2 0 3272 3134 225 213 21 0 chr20 38583533 38583580 -28084425 + MIR SINE MIR 100 147 -61 253 174 0 0 chr20 38583681 38583727 -28084278 - MIR SINE MIR -109 153 108 1638 176 77 39 chr20 38584209 38584572 -28083433 - MLT1B LTR MaLR -12 378 2 1071 191 19 95 chr20 38584600 38584925 -28083080 + L1ME1 LINE L1 5867 6166 0 298 303 25 8 chr20 38584942 38585061 -28082944 + MIR SINE MIR 138 258 -4 500 276 83 17 chr20 38585408 38585428 -28082577 - MIR SINE MIR -44 218 201 314 215 13 0 chr20 38585428 38585507 -28082498 + MER116 DNA Mariner 1 80 0 500 276 83 17 chr20 38585507 38585667 -28082338 - MIR SINE MIR -61 201 26 242 136 23 0 chr20 38586747 38586791 -28081214 - L2 LINE L2 0 3313 3269 742 270 14 67 chr20 38586812 38586872 -28081133 + MLT1H1 LTR MaLR 3 65 -477 2575 74 0 0 chr20 38586872 38587183 -28080822 + AluY SINE Alu 1 311 0 742 270 14 67 chr20 38587183 38587390 -28080615 + MLT1H1 LTR MaLR 65 256 -286 652 266 46 0 chr20 38587405 38587578 -28080427 + MLT1H1 LTR MaLR 375 555 0 2568 73 0 0 chr20 38588306 38588607 -28079398 - AluSq SINE Alu -12 301 1 295 220 220 20 chr20 38588614 38588714 -28079291 - MER5B DNA MER1_type -52 126 7 738 210 74 0 chr20 38588815 38588977 -28079028 + MER63B DNA MER1_type 1 174 -262 413 248 177 7 chr20 38589057 38589198 -28078807 + MER5A DNA MER1_type 25 189 0 1644 175 10 23 chr20 38589242 38589699 -28078306 + AluJo SINE Alu 6 458 0 277 324 24 53 chr20 38589714 38589884 -28078121 - L2 LINE L2 -202 3070 2906 518 202 57 8 chr20 38589929 38590053 -28077952 + MER5A DNA MER1_type 5 134 -55 1965 85 4 0 chr20 38590054 38590301 -28077704 - AluSx SINE Alu -4 308 61 184 304 72 0 chr20 38590415 38590484 -28077521 + L2 LINE L2 2977 3050 -222 678 268 11 16 chr20 38590661 38590844 -28077161 - MIR SINE MIR -14 248 67 295 273 207 8 chr20 38591364 38591485 -28076520 + MIR SINE MIR 117 261 -1 1475 196 23 4 chr20 38591651 38591938 -28076067 + AluJo SINE Alu 17 308 0 761 297 37 0 chr20 38592126 38592372 -28075633 + MIR SINE MIR 8 262 0 292 274 63 15 chr20 38592538 38592657 -28075348 - MIR SINE MIR -42 166 41 194 348 33 0 chr20 38592812 38592904 -28075101 + MIR SINE MIR 167 261 -1 1918 160 0 7 chr20 38592921 38593215 -28074790 - AluJb SINE Alu -20 292 1 348 285 192 6 chr20 38593532 38593704 -28074301 - L2 LINE L2 -221 3092 2889 201 267 8 46 chr20 38594277 38594408 -28073597 + (CCCCG)n Simple_repeat Simple_repeat 3 128 0 656 290 130 13 chr20 38595253 38595553 -28072452 + L2 LINE L2 2979 3313 0 196 286 154 11 chr20 38595558 38595649 -28072356 + L2 LINE L2 3169 3272 0 2323 107 0 0 chr20 38595680 38595971 -28072034 + AluSx SINE Alu 1 291 -21 888 269 5 5 chr20 38596043 38596259 -28071746 - MIR SINE MIR 0 262 47 597 301 1 5 chr20 38596509 38596694 -28071311 - MIR SINE MIR -62 200 16 292 230 266 22 chr20 38597470 38597609 -28070396 + L2 LINE L2 3100 3272 0 202 278 14 14 chr20 38598500 38598572 -28069433 + (TG)n Simple_repeat Simple_repeat 1 72 0 249 242 105 18 chr20 38599013 38599141 -28068864 + MIR SINE MIR 77 224 -38 282 329 0 0 chr20 38599302 38599387 -28068618 - L2 LINE L2 0 3313 3229 454 200 40 10 chr20 38599400 38599500 -28068505 - MER103 DNA DNA -63 103 1 238 216 258 31 chr20 38599668 38599765 -28068240 + MIR SINE MIR 117 235 -27 499 206 135 41 chr20 38600107 38600277 -28067728 + MLT1H LTR MaLR 364 549 0 334 279 136 90 chr20 38601246 38601569 -28066436 - L2 LINE L2 -5 3267 2930 1082 268 117 7 chr20 38601576 38602005 -28066000 + L1ME3 LINE L1 5476 5951 -219 3730 134 57 6 chr20 38602527 38603163 -28064842 - LTR51 LTR ERV1 0 671 4 241 26 26 26 chr20 38603679 38603718 -28064287 + (CAAA)n Simple_repeat Simple_repeat 1 39 0 1566 151 4 0 chr20 38603724 38603956 -28064049 + AluJo SINE Alu 1 233 -79 785 283 44 82 chr20 38604107 38604814 -28063191 - L1MC4a LINE L1 -302 5819 5262 516 323 5 27 chr20 38605029 38605215 -28062790 + MER5A DNA MER1_type 7 188 -1 222 37 0 0 chr20 38605299 38605326 -28062679 + (CCA)n Simple_repeat Simple_repeat 1 27 0 2354 79 3 12 chr20 38606984 38607314 -28060691 - L1PA8A LINE L1 0 6131 5805 336 248 303 0 chr20 38607541 38607686 -28060319 + L1ME3 LINE L1 5973 6161 -1 377 335 26 26 chr20 38607819 38607974 -28060031 + L3 LINE CR1 878 1032 -545 746 299 5 5 chr20 38608076 38608290 -28059715 + MIR SINE MIR 23 236 -26 282 259 49 0 chr20 38609099 38609180 -28058825 + MIR SINE MIR 103 187 -75 * 557 193 133 24 chr20 38609178 38609344 -28058661 - MIR SINE MIR 0 262 79 314 323 135 0 chr20 38609368 38609501 -28058504 + L2 LINE L2 2187 2337 -977 238 225 239 0 chr20 38609515 38609586 -28058419 - MIR SINE MIR -127 135 48 860 219 0 49 chr20 38609670 38609853 -28058152 + FAM SINE Alu 1 174 -1 2285 83 0 65 chr20 38610125 38610449 -28057556 + AluSg SINE Alu 1 303 -7 228 355 56 19 chr20 38610864 38610971 -28057034 - MIR3 SINE MIR -88 120 10 424 321 42 31 chr20 38611369 38611562 -28056443 + MIR SINE MIR 68 262 0 953 193 19 0 chr20 38611611 38611772 -28056233 - FRAM SINE Alu -19 157 1 1755 177 6 10 chr20 38611785 38612096 -28055909 - AluJb SINE Alu -2 310 1 326 298 0 39 chr20 38612241 38612345 -28055660 + C-rich Low_complexity Low_complexity 4 103 0 365 238 21 66 chr20 38613456 38613650 -28054355 + MIR SINE MIR 27 207 -55 278 369 115 19 chr20 38613997 38614371 -28053634 + L2 LINE L2 675 1084 -2230 263 91 0 23 chr20 38614378 38614422 -28053583 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 1948 139 20 27 chr20 38614467 38614762 -28053243 - AluJb SINE Alu -19 293 1 328 290 0 11 chr20 38614762 38614844 -28053161 - L2 LINE L2 -9 3304 3222 403 152 0 30 chr20 38615121 38615187 -28052818 - AluJ/FLAM SINE Alu -238 64 1 207 69 0 0 chr20 38615579 38615608 -28052397 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 2415 202 25 39 chr20 38615611 38616012 -28051993 - MLT1F LTR MaLR -34 508 114 1737 159 0 54 chr20 38616012 38616326 -28051679 - AluJo SINE Alu -15 297 1 2415 202 25 39 chr20 38616326 38616435 -28051570 - MLT1F LTR MaLR -428 114 5 1027 229 25 8 chr20 38616660 38616904 -28051101 - MIR SINE MIR -3 259 12 2005 72 79 7 chr20 38618198 38618477 -28049528 - LTR17 LTR ERV1 0 780 482 1175 92 0 17 chr20 38618472 38618646 -28049359 + LTR17 LTR ERV1 289 459 -321 * 547 43 0 14 chr20 38618660 38618730 -28049275 - LTR17 LTR ERV1 -711 69 1 2159 102 7 3 chr20 38619134 38619450 -28048555 + AluSg SINE Alu 1 317 0 410 278 172 0 chr20 38619588 38619739 -28048266 - MER5A DNA MER1_type -12 177 1 217 268 18 0 chr20 38619799 38619855 -28048150 + GA-rich Low_complexity Low_complexity 1 57 0 195 42 0 0 chr20 38619959 38619983 -28048022 + (TC)n Simple_repeat Simple_repeat 1 24 0 253 306 0 0 chr20 38619995 38620067 -28047938 + LTR16C LTR ERVL 411 482 -9 248 266 104 39 chr20 38620832 38620986 -28047019 + MER117 DNA MER1_type 6 169 -28 1112 252 48 53 chr20 38621086 38621483 -28046522 + LTR16C LTR ERVL 97 491 0 2133 145 0 0 chr20 38621622 38621926 -28046079 - AluSx SINE Alu -2 310 7 301 320 19 29 chr20 38622280 38622383 -28045622 + L2 LINE L2 3121 3222 -50 255 313 12 0 chr20 38622397 38622477 -28045528 + L2 LINE L2 2564 2644 -670 974 269 133 6 chr20 38622833 38623304 -28044701 - L2 LINE L2 -267 3046 2537 325 308 150 40 chr20 38623616 38623889 -28044116 + L2 LINE L2 2848 3150 -122 495 255 21 130 chr20 38624237 38624351 -28043654 + MIR SINE MIR 37 113 -149 2414 112 0 0 chr20 38624351 38624663 -28043342 - AluSx SINE Alu 0 312 1 495 255 21 130 chr20 38624663 38624787 -28043218 + MIR SINE MIR 113 249 -13 327 280 93 0 chr20 38625597 38625704 -28042301 - MER117 DNA MER1_type -40 157 41 195 259 0 0 chr20 38625747 38625805 -28042200 + (ATGGTG)n Simple_repeat Simple_repeat 5 62 0 437 261 0 9 chr20 38626076 38626187 -28041818 - MIR SINE MIR -55 153 44 270 251 64 96 chr20 38626849 38626884 -28041121 - MIR SINE MIR -38 224 189 2391 104 0 0 chr20 38626884 38627182 -28040823 - AluSg SINE Alu -12 298 1 270 251 64 96 chr20 38627182 38627333 -28040672 - MIR SINE MIR -73 189 44 * 617 240 91 0 chr20 38627292 38627446 -28040559 + MIR SINE MIR 5 172 -90 2118 115 18 0 chr20 38627862 38628141 -28039864 + AluSg SINE Alu 1 284 -26 779 57 9 0 chr20 38628142 38628247 -28039758 + (AATAG)n Simple_repeat Simple_repeat 4 109 0 317 260 98 8 chr20 38628422 38628545 -28039460 + L2 LINE L2 3138 3271 -1 301 293 21 29 chr20 38628669 38628809 -28039196 + L1MC4a LINE L1 5829 5967 -1841 2021 96 8 4 chr20 38628870 38629159 -28038846 + AluSq SINE Alu 21 310 0 195 189 0 0 chr20 38629710 38629763 -28038242 + A-rich Low_complexity Low_complexity 1 53 0 2164 101 0 80 chr20 38629925 38630261 -28037744 + AluSx SINE Alu 1 309 -3 859 235 78 4 chr20 38630976 38631206 -28036799 - MIR SINE MIR -12 250 4 236 325 9 9 chr20 38631330 38631444 -28036561 + MIR SINE MIR 29 142 -120 2306 120 0 3 chr20 38631619 38631920 -28036085 - AluSx SINE Alu -12 300 1 218 257 43 0 chr20 38632275 38632345 -28035660 + MIR SINE MIR 189 261 -1 2243 90 14 0 chr20 38632350 38632640 -28035365 - AluSq SINE Alu -19 294 1 1328 150 9 19 chr20 38632664 38632877 -28035128 + AluJb SINE Alu 84 294 -18 252 330 70 10 chr20 38633281 38633381 -28034624 - L2 LINE L2 -168 3104 2999 425 271 53 32 chr20 38633422 38633610 -28034395 - MIR SINE MIR -50 212 21 2269 59 37 4 chr20 38633612 38633932 -28034073 + AluY SINE Alu 1 329 0 385 175 0 0 chr20 38634749 38634812 -28033193 - L2 LINE L2 0 3313 3251 317 320 10 0 chr20 38634850 38634953 -28033052 - MIR SINE MIR 0 262 159 407 194 51 20 chr20 38635360 38635458 -28032547 - MIR SINE MIR -106 156 56 26 30 0 0 chr20 38636230 38636263 -28031742 + AT_rich Low_complexity Low_complexity 1 33 0 2206 103 13 7 chr20 38636263 38636584 -28031421 + AluSq SINE Alu 1 313 0 2023 126 36 0 chr20 38636652 38636930 -28031075 - AluSx SINE Alu -24 288 1 638 276 9 46 chr20 38637332 38637549 -28030456 + MIR SINE MIR 47 255 -7 876 222 6 2 chr20 38637787 38637987 -28030018 - MLT1B LTR MaLR -3 382 174 239 150 17 0 chr20 38637989 38638049 -28029956 + GA-rich Low_complexity Low_complexity 1 61 0 679 172 96 6 chr20 38638062 38638219 -28029786 - MLT1B LTR MaLR -219 171 1 248 230 27 27 chr20 38638456 38638530 -28029475 + MIR SINE MIR 175 248 -14 354 311 25 25 chr20 38639205 38639324 -28028681 - L3 LINE CR1 -30 1547 1429 315 0 0 0 chr20 38640426 38640461 -28027544 + (TG)n Simple_repeat Simple_repeat 1 35 0 437 304 84 5 chr20 38641155 38641346 -28026659 - MIR SINE MIR 0 262 57 336 248 38 19 chr20 38641612 38641717 -28026288 + MIR SINE MIR 40 146 -62 278 24 73 0 chr20 38642399 38642440 -28025565 + T-rich Low_complexity Low_complexity 2 45 0 258 32 0 0 chr20 38644234 38644265 -28023740 + (CCG)n Simple_repeat Simple_repeat 2 32 0 340 258 103 62 chr20 38649543 38649737 -28018268 - L2 LINE L2 -4 3309 3108 183 80 0 0 chr20 38650304 38650329 -28017676 + (TG)n Simple_repeat Simple_repeat 1 25 0 1694 158 3 17 chr20 38652235 38652526 -28015479 - AluJb SINE Alu -25 287 1 938 191 35 70 chr20 38652580 38652837 -28015168 - MER96B DNA MER1_type? -169 248 1 355 274 0 69 chr20 38653243 38653345 -28014660 - L2 LINE L2 -4 3309 3215 598 288 116 9 chr20 38653555 38653770 -28014235 + LTR16C LTR ERVL 252 489 -2 194 213 93 67 chr20 38653843 38653918 -28014087 - MER5A DNA MER1_type -21 168 92 285 151 0 0 chr20 38653924 38653977 -28014028 + CT-rich Low_complexity Low_complexity 3 55 0 219 69 0 0 chr20 38654046 38654075 -28013930 + (TGGA)n Simple_repeat Simple_repeat 1 29 0 201 274 20 39 chr20 38654100 38654202 -28013803 + (TGAA)n Simple_repeat Simple_repeat 1 100 0 349 327 18 9 chr20 38654241 38654354 -28013651 + L2 LINE L2 3157 3270 -2 257 304 49 90 chr20 38654364 38654491 -28013514 - L2 LINE L2 -1079 2235 2123 2211 99 0 3 chr20 38654491 38654795 -28013210 + AluSx SINE Alu 1 303 -9 257 304 49 90 chr20 38654795 38654933 -28013072 - L2 LINE L2 -1191 2123 1981 2806 131 26 12 chr20 38655000 38655420 -28012585 + MSTB LTR MaLR 1 426 0 525 245 85 43 chr20 38655647 38655835 -28012170 - LTR16C LTR ERVL -9 482 287 1982 100 0 38 chr20 38656255 38656397 -28011608 + AluSg SINE Alu 3 149 -262 2068 86 39 0 chr20 38656397 38656677 -28011328 + AluY SINE Alu 5 295 -16 1982 100 0 38 chr20 38656677 38656954 -28011051 + AluSg SINE Alu 149 411 0 228 163 0 0 chr20 38656976 38657019 -28010986 + GA-rich Low_complexity Low_complexity 1 43 0 364 266 58 27 chr20 38657059 38657247 -28010758 + L1M4 LINE L1 2133 2326 -3820 2072 99 3 0 chr20 38657249 38657559 -28010446 + AluSp SINE Alu 1 311 0 1661 174 3 17 chr20 38657694 38657987 -28010018 - AluJo SINE Alu -23 289 1 1906 138 26 0 chr20 38658091 38658395 -28009610 - AluSx SINE Alu 0 312 1 5181 256 99 47 chr20 38658413 38658554 -28009451 - HAL1 LINE L1 0 2507 2375 2153 95 7 0 chr20 38658554 38658848 -28009157 - AluSp SINE Alu -16 297 2 5181 256 99 47 chr20 38658848 38658901 -28009104 - HAL1 LINE L1 -132 2375 2326 1749 164 0 4 chr20 38658901 38659182 -28008823 + AluSx SINE Alu 1 280 -32 5181 256 99 47 chr20 38659182 38659500 -28008505 - HAL1 LINE L1 -181 2326 2026 1356 144 88 35 chr20 38659500 38659671 -28008334 - AluJo SINE Alu -13 299 106 1711 165 44 0 chr20 38659671 38659968 -28008037 - AluJo SINE Alu -2 310 1 1356 144 88 35 chr20 38659968 38660080 -28007925 - AluJo SINE Alu -206 106 1 5181 256 99 47 chr20 38660080 38661878 -28006127 - HAL1 LINE L1 -481 2026 74 183 307 79 40 chr20 38662068 38662169 -28005836 - L2 LINE L2 -240 3032 2928 668 203 74 88 chr20 38662662 38662792 -28005213 + MLT1C LTR MaLR 65 192 -275 1740 107 110 11 chr20 38662792 38663073 -28004932 + AluSg1 SINE Alu 1 309 0 668 203 74 88 chr20 38663073 38663159 -28004846 + MLT1C LTR MaLR 192 278 -189 1461 201 90 92 chr20 38663187 38663364 -28004641 - MLT2B1 LTR ERVL 0 520 344 1977 135 146 13 chr20 38663364 38663742 -28004263 - MSTA LTR MaLR 0 428 1 1461 201 90 92 chr20 38663742 38663858 -28004147 - MLT2B1 LTR ERVL -176 344 229 2258 100 10 0 chr20 38663858 38664168 -28003837 + AluSp SINE Alu 1 313 0 1461 201 90 92 chr20 38664168 38664394 -28003611 - MLT2B1 LTR ERVL -291 229 1 810 209 16 22 chr20 38664402 38664584 -28003421 + MLT1C LTR MaLR 287 467 0 2000 118 7 3 chr20 38664600 38664889 -28003116 - AluSx SINE Alu -22 290 1 890 150 9 112 chr20 38664952 38665013 -28002992 - MER3 DNA MER1_type 0 209 143 2111 131 0 0 chr20 38665013 38665326 -28002679 + AluSq SINE Alu 1 313 0 890 150 9 112 chr20 38665326 38665497 -28002508 - MER3 DNA MER1_type -66 143 1 274 208 0 0 chr20 38665758 38665811 -28002194 - MLT1I LTR MaLR -271 138 86 427 163 279 0 chr20 38665957 38666043 -28001962 + AluJb SINE Alu 82 191 -121 * 634 118 0 0 chr20 38666036 38666121 -28001884 - AluJ/FLAM SINE Alu -221 91 7 41 0 0 0 chr20 38666148 38666189 -28001816 + AT_rich Low_complexity Low_complexity 1 41 0 2356 82 0 0 chr20 38666198 38666502 -28001503 - AluSq SINE Alu -9 304 1 1978 129 0 3 chr20 38666713 38667024 -28000981 + AluSx SINE Alu 1 310 -2 1151 127 0 0 chr20 38667189 38667354 -28000651 + AluJb SINE Alu 85 249 -63 183 212 0 0 chr20 38668796 38668829 -27999176 - L2 LINE L2 -52 3261 3229 1714 213 147 24 chr20 38668889 38669619 -27998386 - L2 LINE L2 -3 3310 2492 413 280 110 22 chr20 38670130 38670312 -27997693 + MIR3 SINE MIR 11 208 0 222 189 57 38 chr20 38670331 38670384 -27997621 + L2 LINE L2 3215 3268 -4 1927 114 19 10 chr20 38670439 38670746 -27997259 - AluSx SINE Alu -2 310 1 267 167 0 74 chr20 38670786 38670840 -27997165 + L2 LINE L2 3259 3308 -5 294 276 95 9 chr20 38671003 38671108 -27996897 + MIR SINE MIR 99 212 -50 447 228 177 25 chr20 38671525 38671683 -27996322 - MER5A DNA MER1_type -1 188 7 280 316 13 0 chr20 38671758 38671834 -27996171 + L3 LINE CR1 1498 1574 -3 330 119 60 0 chr20 38672738 38672805 -27995200 - L1MB2 LINE L1 0 6171 6101 384 156 13 39 chr20 38673061 38673138 -27994867 + L1ME1 LINE L1 6003 6077 -89 808 190 15 36 chr20 38673172 38673367 -27994638 + L1MD2 LINE L1 5806 5996 -363 256 164 213 0 chr20 38673367 38673428 -27994577 - L1M4 LINE L1 -490 5688 5615 * 1613 240 84 27 chr20 38673426 38674127 -27993878 - L1MDa LINE L1 -3838 2702 1967 1962 94 4 4 chr20 38674252 38674528 -27993477 + AluY SINE Alu 1 276 -35 1308 85 0 6 chr20 38674528 38674704 -27993301 - AluY SINE Alu -136 175 1 517 253 59 12 chr20 38675220 38675390 -27992615 - L1ME3A LINE L1 0 6170 5993 2067 119 3 0 chr20 38676438 38676740 -27991265 + AluSq SINE Alu 1 303 -10 1535 196 3 7 chr20 38676746 38677042 -27990963 - AluJo SINE Alu -17 295 1 2335 71 0 0 chr20 38678180 38678476 -27989529 + AluSx SINE Alu 1 296 -16 1388 161 77 28 chr20 38679701 38679986 -27988019 + AluJo SINE Alu 1 299 -13 499 238 172 20 chr20 38680440 38680591 -27987414 - MIR SINE MIR -87 175 2 361 195 12 24 chr20 38680661 38680743 -27987262 - AluJo SINE Alu -1 301 221 1293 123 9 32 chr20 38680816 38681036 -27986969 - AluJo SINE Alu -97 215 1 954 111 8 184 chr20 38681344 38681578 -27986427 + 7SK RNA RNA 1 193 0 1810 244 79 79 chr20 38681806 38682389 -27985616 - MLT1G LTR MaLR -8 582 5 362 298 30 38 chr20 38683408 38683539 -27984466 + MIR SINE MIR 21 150 -112 388 293 177 9 chr20 38684001 38684216 -27983789 - L3 LINE CR1 -7 1570 1320 1705 157 3 10 chr20 38684489 38684788 -27983217 - AluJb SINE Alu -15 297 1 191 261 0 46 chr20 38686331 38686396 -27981609 + L2 LINE L2 3202 3263 -9 368 218 50 20 chr20 38686886 38686987 -27981018 + L1ME1 LINE L1 6010 6113 -53 22 56 0 0 chr20 38687005 38687041 -27980964 + AT_rich Low_complexity Low_complexity 1 36 0 274 239 193 0 chr20 38687481 38687590 -27980415 - L1ME4a LINE L1 -100 6021 5892 285 263 96 56 chr20 38687719 38687917 -27980088 - L2 LINE L2 -344 2970 2765 210 328 141 16 chr20 38687987 38688115 -27979890 + MIR SINE MIR 100 243 -19 2481 203 72 4 chr20 38688127 38688653 -27979352 - MER68 LTR ERV1 0 562 1 287 269 97 35 chr20 38688653 38688798 -27979207 - L2 LINE L2 -538 2776 2623 411 240 161 21 chr20 38688887 38689079 -27978926 + L2 LINE L2 2841 3059 -213 225 227 41 41 chr20 38690297 38690394 -27977611 - L1ME4a LINE L1 -224 5897 5801 1000 168 0 12 chr20 38692109 38692276 -27975729 + FAM SINE Alu 1 165 -10 237 380 78 0 chr20 38692347 38692476 -27975529 - MIR3 SINE MIR -54 154 16 4487 163 39 50 chr20 38693121 38693159 -27974846 - L1MB2 LINE L1 -12 6159 6122 2114 104 0 3 chr20 38693159 38693457 -27974548 - AluY SINE Alu -14 297 1 4487 163 39 50 chr20 38693457 38694584 -27973421 - L1MB2 LINE L1 -49 6122 5003 231 261 92 76 chr20 38694740 38694789 -27973216 + HAL1b LINE L1 312 359 -989 2050 119 7 0 chr20 38694789 38695082 -27972923 + AluSx SINE Alu 1 295 -17 231 261 92 76 chr20 38695082 38695151 -27972854 + HAL1b LINE L1 359 432 -916 411 321 84 77 chr20 38695186 38695308 -27972697 + L1M4 LINE L1 3191 3311 -2835 1387 190 78 4 chr20 38695308 38695577 -27972428 + AluJo SINE Alu 1 289 -23 411 321 84 77 chr20 38695577 38696045 -27971960 + L1M4 LINE L1 3311 3788 -2358 2213 99 0 0 chr20 38696045 38696348 -27971657 + AluSc SINE Alu 1 303 -6 411 321 84 77 chr20 38696348 38696364 -27971641 + L1M4 LINE L1 3788 3802 -2344 276 142 85 108 chr20 38696364 38696498 -27971507 - MLT1J2 LTR MaLR -1 449 313 328 348 17 0 chr20 38696553 38696671 -27971334 - MLT1I LTR MaLR -203 206 87 300 267 57 0 chr20 38696671 38696727 -27971278 - L1MDa LINE L1 -4122 2418 2367 321 26 0 0 chr20 38696727 38696765 -27971240 + (TG)n Simple_repeat Simple_repeat 1 38 0 300 267 57 0 chr20 38696765 38696813 -27971192 - L1MDa LINE L1 -4173 2367 2308 399 278 73 37 chr20 38696835 38697026 -27970979 - L1MDa LINE L1 -4363 2358 2161 1915 132 0 41 chr20 38697036 38697171 -27970834 + AluJo SINE Alu 1 140 -172 2378 88 0 0 chr20 38697171 38697479 -27970526 + AluSc SINE Alu 2 309 0 1915 132 0 41 chr20 38697479 38697661 -27970344 + AluJo SINE Alu 140 305 -7 2263 80 0 16 chr20 38697965 38698278 -27969727 - AluSc SINE Alu -1 308 1 2054 120 3 7 chr20 38699049 38699332 -27968673 + AluSq SINE Alu 1 282 -31 577 288 63 115 chr20 38700099 38700603 -27967402 + L1MC4a LINE L1 6114 6591 -1217 1812 117 0 4 chr20 38700661 38700936 -27967069 + AluSx SINE Alu 53 326 0 893 206 86 23 chr20 38700949 38701237 -27966768 + L1MC5 LINE L1 6877 7153 -808 672 183 8 0 chr20 38701256 38701382 -27966623 - AluSg/x SINE Alu -1 308 182 2005 110 65 0 chr20 38701456 38701748 -27966257 + AluSx SINE Alu 1 311 -1 424 222 46 0 chr20 38701824 38701932 -27966073 + L1MC5 LINE L1 7271 7383 -578 666 243 23 32 chr20 38702122 38702340 -27965665 - LTR33 LTR ERVL -265 256 41 956 216 101 92 chr20 38702375 38702524 -27965481 + L1MC5 LINE L1 7375 7521 -440 1673 164 0 87 chr20 38702524 38702859 -27965146 + AluSx SINE Alu 7 312 0 956 216 101 92 chr20 38702859 38703255 -27964750 + L1MC5 LINE L1 7521 7925 -36 1559 177 64 3 chr20 38703268 38703550 -27964455 + AluJo SINE Alu 1 299 -13 661 118 0 11 chr20 38703670 38703763 -27964242 - FLAM_A SINE Alu -32 110 19 245 203 68 0 chr20 38703903 38703962 -27964043 - L1MC/D LINE L1 -1934 5874 5812 2179 125 0 13 chr20 38704025 38704328 -27963677 - AluSx SINE Alu -13 299 1 2333 105 0 0 chr20 38704557 38704851 -27963154 + AluSx SINE Alu 1 294 -18 234 307 29 29 chr20 38704865 38705002 -27963003 - L1ME3A LINE L1 -24 6146 6010 1733 196 0 29 chr20 38705119 38705431 -27962574 - AluJo SINE Alu -9 303 1 1930 118 24 38 chr20 38705439 38705756 -27962249 - AluSx SINE Alu 0 313 1 487 129 89 0 chr20 38705756 38705857 -27962148 - L1ME3A LINE L1 -297 5873 5764 330 340 81 20 chr20 38705852 38706258 -27961747 - L1M4 LINE L1 -1146 5000 4570 * 446 297 23 80 chr20 38706310 38706599 -27961406 - L1ME2 LINE L1 -293 5871 5610 23 33 0 0 chr20 38706599 38706629 -27961376 + AT_rich Low_complexity Low_complexity 1 30 0 2039 152 3 3 chr20 38706679 38706989 -27961016 + AluSx SINE Alu 1 310 -2 301 26 92 13 chr20 38706989 38707065 -27960940 + (TA)n Simple_repeat Simple_repeat 1 82 0 322 244 41 32 chr20 38707425 38707548 -27960457 + MLT1K LTR MaLR 353 476 -112 794 224 107 37 chr20 38707770 38708096 -27959909 - MLT1H1 LTR MaLR -6 549 201 250 309 0 12 chr20 38708172 38708256 -27959749 - MLT1H1 LTR MaLR -439 103 21 680 263 150 5 chr20 38708498 38708711 -27959294 + MIR SINE MIR 12 255 -7 309 321 14 21 chr20 38708804 38708944 -27959061 - L2 LINE L2 -256 3016 2878 1058 188 57 182 chr20 38708971 38709036 -27958969 + MLT1G3 LTR MaLR 3 75 -455 1974 152 44 41 chr20 38709036 38709134 -27958871 + MLT1B LTR MaLR 1 97 -293 2332 106 3 10 chr20 38709134 38709446 -27958559 + AluSx SINE Alu 1 310 -2 1974 152 44 41 chr20 38709446 38709736 -27958269 + MLT1B LTR MaLR 97 390 0 1058 188 57 182 chr20 38709736 38710334 -27957671 + MLT1G3 LTR MaLR 74 528 -2 772 248 65 40 chr20 38710650 38710803 -27957202 + MER46C DNA MER2_type 1 149 -189 2462 79 7 0 chr20 38710803 38711106 -27956899 - AluSx SINE Alu -7 305 1 772 248 65 40 chr20 38711106 38711175 -27956830 + MER46C DNA MER2_type 149 215 -123 842 202 92 0 chr20 38711175 38711348 -27956657 + MER5A DNA MER1_type 1 189 0 772 248 65 40 chr20 38711348 38711446 -27956559 + MER46C DNA MER2_type 215 330 -8 2388 82 3 0 chr20 38711524 38711817 -27956188 + AluSp SINE Alu 1 294 -19 503 278 80 12 chr20 38711875 38712037 -27955968 - MIR SINE MIR 0 262 90 239 118 0 0 chr20 38712056 38712090 -27955915 - LTR33 LTR ERVL -253 268 235 2255 93 0 17 chr20 38712388 38712703 -27955302 + AluSq SINE Alu 1 310 0 566 275 68 52 chr20 38712710 38713254 -27954751 - L1ME3A LINE L1 -255 5915 5365 337 153 0 141 chr20 38713297 38713382 -27954623 + Tigger2 DNA MER2_type 1 73 -2645 430 299 58 90 chr20 38713934 38713959 -27954046 - L2 LINE L2 -1 3271 3247 1607 164 19 68 chr20 38713959 38714100 -27953905 + AluJo SINE Alu 2 148 -164 2117 143 0 0 chr20 38714100 38714394 -27953611 + AluSx SINE Alu 1 294 -18 1607 164 19 68 chr20 38714394 38714576 -27953429 + AluJo SINE Alu 148 309 -3 430 299 58 90 chr20 38714576 38714675 -27953330 - L2 LINE L2 -25 3247 3146 1582 174 72 72 chr20 38714675 38714948 -27953057 - MLT1B LTR MaLR 0 390 115 2166 138 0 3 chr20 38714948 38715259 -27952746 - AluSx SINE Alu -2 310 1 1582 174 72 72 chr20 38715259 38715375 -27952630 - MLT1B LTR MaLR -274 116 1 430 299 58 90 chr20 38715375 38715594 -27952411 - L2 LINE L2 -126 3146 2938 319 236 36 45 chr20 38715711 38715821 -27952184 - MER5A DNA MER1_type -28 161 53 434 211 24 16 chr20 38715821 38715944 -27952061 - L1MC4 LINE L1 0 8042 7919 1238 290 38 36 chr20 38715968 38715992 -27952013 - L1MC4 LINE L1 -210 7832 7810 1679 164 41 7 chr20 38715992 38716139 -27951866 + AluJo SINE Alu 1 141 -171 2360 98 0 7 chr20 38716139 38716444 -27951561 + AluSc SINE Alu 1 303 -6 1679 164 41 7 chr20 38716444 38716588 -27951417 + AluJo SINE Alu 141 302 -10 1238 290 38 36 chr20 38716588 38717226 -27950779 - L1MC4 LINE L1 -232 7810 7169 932 134 6 0 chr20 38717234 38717391 -27950614 + (TTCC)n Simple_repeat Simple_repeat 2 159 0 2184 126 0 0 chr20 38717392 38717678 -27950327 - AluSx SINE Alu -26 286 1 204 94 0 31 chr20 38717679 38717711 -27950294 - MER5A DNA MER1_type -115 74 44 187 273 71 61 chr20 38717826 38717925 -27950080 + MER5A DNA MER1_type 52 151 -38 2469 169 16 16 chr20 38717944 38718387 -27949618 + MSTB2 LTR MaLR 11 453 -4 447 267 19 9 chr20 38718540 38718645 -27949360 - MER5B DNA MER1_type -72 106 1 2393 95 0 0 chr20 38718684 38718988 -27949017 + AluY SINE Alu 1 304 -7 252 325 123 9 chr20 38719201 38719334 -27948671 - MIR SINE MIR -66 142 16 1392 136 93 107 chr20 38719552 38719862 -27948143 + AluJo SINE Alu 1 306 -6 2008 128 45 0 chr20 38719872 38720160 -27947845 + AluSx SINE Alu 1 301 -11 2554 48 0 0 chr20 38720294 38720588 -27947417 - AluY SINE Alu -17 294 1 4418 153 57 55 chr20 38720903 38721347 -27946658 - L1MB8 LINE L1 0 6178 5737 2874 3 0 0 chr20 38721347 38721650 -27946355 - AluYa5 SINE Alu -8 303 1 4418 153 57 55 chr20 38721650 38722052 -27945953 - L1MB8 LINE L1 -441 5737 5337 1602 123 0 4 chr20 38722052 38722279 -27945726 - AluSg/x SINE Alu 0 310 85 4418 153 57 55 chr20 38722279 38722403 -27945602 - L1MB8 LINE L1 -841 5337 5215 1801 160 22 78 chr20 38722403 38722469 -27945536 - MLT1B LTR MaLR 0 390 322 2346 109 0 0 chr20 38722469 38722772 -27945233 + AluSx SINE Alu 1 303 -9 1801 160 22 78 chr20 38722772 38723118 -27944887 - MLT1B LTR MaLR -68 322 1 4418 153 57 55 chr20 38723118 38723157 -27944848 - L1MB8 LINE L1 -963 5215 5178 1721 186 45 0 chr20 38723157 38723448 -27944557 - AluJo SINE Alu -8 304 1 4418 153 57 55 chr20 38723448 38723915 -27944090 - L1MB8 LINE L1 -1000 5178 4700 412 265 67 0 chr20 38725107 38725223 -27942782 + MIR SINE MIR 24 147 -61 238 292 67 22 chr20 38727059 38727148 -27940857 + MIR SINE MIR 59 151 -111 357 213 67 0 chr20 38727968 38728043 -27939962 - MIR SINE MIR -70 192 113 572 297 28 22 chr20 38728382 38728564 -27939441 + MIR SINE MIR 35 217 -45 2198 117 3 0 chr20 38728571 38728870 -27939135 + AluSx SINE Alu 5 304 -8 263 323 213 0 chr20 38729174 38729301 -27938704 - L2 LINE L2 0 3272 3119 197 311 14 14 chr20 38729364 38729438 -27938567 + MIR SINE MIR 40 113 -149 1999 156 0 16 chr20 38729513 38729827 -27938178 + AluJb SINE Alu 1 309 -3 312 256 39 45 chr20 38729978 38730134 -27937871 - L2 LINE L2 -300 2972 2818 554 294 35 6 chr20 38730489 38730659 -27937346 - MIR SINE MIR -21 241 67 386 277 30 0 chr20 38731132 38731233 -27936772 + MIR SINE MIR 46 149 -113 1131 154 0 66 chr20 38731465 38731692 -27936313 + MER20 DNA MER1_type 3 214 -5 348 298 30 76 chr20 38731697 38731828 -27936177 + L2 LINE L2 3148 3272 0 441 219 62 10 chr20 38732740 38732836 -27935169 - MER5A DNA MER1_type -85 104 4 421 278 8 16 chr20 38733136 38733262 -27934743 + MER5A DNA MER1_type 44 168 -21 556 230 86 59 chr20 38733326 38733478 -27934527 + MER91A DNA MER1_type 1 156 -40 794 254 68 48 chr20 38733478 38733568 -27934437 - MIR SINE MIR -2 260 173 2127 116 0 0 chr20 38733568 38733912 -27934093 - AluSx SINE Alu 0 344 1 794 254 68 48 chr20 38733912 38734068 -27933937 - MIR SINE MIR -89 173 8 404 266 73 32 chr20 38734189 38734313 -27933692 + MIR SINE MIR 29 157 -105 395 246 144 79 chr20 38735166 38735520 -27932485 - L1ME LINE L1 -301 5820 5444 208 333 119 0 chr20 38735591 38735717 -27932288 - L2 LINE L2 -14 3299 3159 372 292 138 31 chr20 38736854 38736984 -27931021 - L2 LINE L2 -22 3250 3107 2290 112 0 7 chr20 38737096 38737400 -27930605 + AluSq SINE Alu 1 302 -11 230 302 70 12 chr20 38737490 38737576 -27930429 - L2 LINE L2 -243 3029 2939 2587 56 0 0 chr20 38737578 38737880 -27930125 + AluY SINE Alu 1 302 -9 512 301 142 13 chr20 38737905 38738131 -27929874 + MIR SINE MIR 3 257 -5 250 239 54 0 chr20 38738417 38738509 -27929496 - MER103 DNA DNA -12 154 58 1744 166 12 56 chr20 38738570 38738890 -27929115 - AluJo SINE Alu -6 306 1 773 283 46 25 chr20 38738928 38739165 -27928840 + MIR SINE MIR 20 261 -1 663 189 30 23 chr20 38739182 38739314 -27928691 + FLAM_A SINE Alu 1 133 0 624 215 55 0 chr20 38739472 38739608 -27928397 + MER5B DNA MER1_type 1 144 -45 1921 238 93 35 chr20 38739622 38740092 -27927913 - L1ME3A LINE L1 -10 6160 5719 2500 70 3 0 chr20 38740092 38740390 -27927615 + AluSp SINE Alu 1 299 -14 1921 238 93 35 chr20 38740390 38740566 -27927439 - L1ME3A LINE L1 -451 5719 5469 2525 65 0 29 chr20 38740566 38740875 -27927130 + AluY SINE Alu 1 300 -11 1921 238 93 35 chr20 38740875 38740917 -27927088 - L1ME3A LINE L1 -701 5469 5431 204 183 124 0 chr20 38740921 38740970 -27927035 + MER5B DNA MER1_type 131 173 -5 1582 244 35 104 chr20 38741508 38742418 -27925587 - L1ME LINE L1 -5218 852 6 2311 103 13 10 chr20 38743174 38743485 -27924520 + AluSx SINE Alu 1 312 0 355 288 96 41 chr20 38743785 38743985 -27924020 + MIR SINE MIR 2 214 -48 210 292 0 18 chr20 38744309 38744378 -27923627 + MIR SINE MIR 18 86 -122 1414 145 145 16 chr20 38744563 38744818 -27923187 + AluSg1 SINE Alu 1 288 -21 329 173 0 0 chr20 38745562 38745614 -27922391 - Alu SINE Alu -248 52 1 420 327 12 0 chr20 38745672 38745837 -27922168 - MER117 DNA MER1_type -13 184 18 1522 126 0 30 chr20 38746750 38746981 -27921024 - AluJo SINE Alu -3 309 86 193 311 81 81 chr20 38747083 38747231 -27920774 - L3 LINE CR1 -505 1072 925 265 247 49 12 chr20 38748263 38748344 -27919661 - MLT1K LTR MaLR -16 572 489 365 280 21 0 chr20 38750034 38750127 -27917878 + L2 LINE L2 3214 3308 -5 1066 254 137 15 chr20 38750191 38750651 -27917354 + MER113 DNA MER1_type? 5 520 -1 576 239 69 93 chr20 38751321 38751610 -27916395 - MER102b DNA MER1_type 0 341 60 185 405 0 0 chr20 38751837 38751926 -27916079 + L2 LINE L2 2965 3053 -219 584 224 0 42 chr20 38751940 38752083 -27915922 + MIR SINE MIR 61 197 -65 2874 172 50 83 chr20 38752310 38752453 -27915552 + L1MD1 LINE L1 5457 5603 -639 2383 77 20 0 chr20 38752453 38752751 -27915254 + AluSx SINE Alu 2 305 -7 2874 172 50 83 chr20 38752751 38753414 -27914591 + L1MD1 LINE L1 5603 6236 -6 729 174 8 15 chr20 38753994 38754126 -27913879 - FLAM_C SINE Alu -11 132 2 197 273 36 18 chr20 38754176 38754231 -27913774 - MIR SINE MIR -65 143 88 1801 169 47 108 chr20 38754407 38754964 -27913041 - Charlie1b DNA MER1_type 0 523 1 235 253 19 117 chr20 38755253 38755281 -27912724 - L2 LINE L2 -470 2844 2815 1011 174 79 0 chr20 38755281 38755471 -27912534 + MER3 DNA MER1_type 5 209 0 235 253 19 117 chr20 38755471 38755596 -27912409 - L2 LINE L2 -499 2815 2706 1644 179 0 23 chr20 38756172 38756474 -27911531 - AluJb SINE Alu -17 295 1 593 212 18 0 chr20 38756509 38756642 -27911363 - FLAM_A SINE Alu 0 135 1 186 303 146 0 chr20 38756731 38756820 -27911185 - L2 LINE L2 -13 3259 3158 589 306 32 40 chr20 38756930 38757182 -27910823 + MIR SINE MIR 10 259 -3 2178 126 0 19 chr20 38757345 38757663 -27910342 - AluSx SINE Alu 0 312 1 23 0 0 0 chr20 38757702 38757725 -27910280 + AT_rich Low_complexity Low_complexity 1 23 0 374 202 173 9 chr20 38757768 38757898 -27910107 - MIR SINE MIR -37 171 22 334 270 98 50 chr20 38758637 38758736 -27909269 + MIR3 SINE MIR 13 106 -156 2241 99 0 3 chr20 38758736 38759042 -27908963 - AluSx SINE Alu 0 307 3 334 270 98 50 chr20 38759042 38759134 -27908871 + MIR3 SINE MIR 106 216 -46 210 143 0 0 chr20 38759293 38759328 -27908677 + (TCCC)n Simple_repeat Simple_repeat 2 36 0 494 236 43 67 chr20 38759456 38759664 -27908341 - L1MC4a LINE L1 -1879 5929 5727 255 309 99 47 chr20 38760244 38760477 -27907528 + L2 LINE L2 2826 3070 -202 944 239 48 16 chr20 38760515 38760766 -27907239 + MIR SINE MIR 1 259 -3 319 218 141 0 chr20 38760830 38760908 -27907097 - MIR SINE MIR -13 249 161 2706 180 32 42 chr20 38760925 38761071 -27906934 - L1MB7 LINE L1 0 6184 6038 1545 157 42 45 chr20 38761071 38761358 -27906647 + AluJb SINE Alu 12 297 -15 2706 180 32 42 chr20 38761358 38761862 -27906143 - L1MB7 LINE L1 -146 6038 5540 615 208 20 47 chr20 38761862 38762011 -27905994 - MIR SINE MIR -117 145 1 313 188 35 97 chr20 38762630 38762774 -27905231 - L1ME4a LINE L1 -1 6120 5986 267 270 0 11 chr20 38762777 38762866 -27905139 - LTR33 LTR ERVL 0 521 434 772 198 40 0 chr20 38762875 38763048 -27904957 - Charlie1a DNA MER1_type -1 1454 1275 2450 163 152 4 chr20 38763048 38763540 -27904465 - MLT1F1 LTR MaLR -2 565 1 * 5009 182 96 18 chr20 38763540 38764721 -27903284 - Charlie1a DNA MER1_type -181 1274 1 307 247 90 78 chr20 38764721 38764886 -27903119 - LTR33 LTR ERVL -98 423 257 820 224 0 18 chr20 38765116 38765308 -27902697 + FRAM SINE Alu 1 176 0 1280 261 156 64 chr20 38765428 38766347 -27901658 - L2 LINE L2 -358 2956 1954 582 249 98 54 chr20 38766347 38766536 -27901469 - L1ME4a LINE L1 -260 5861 5653 1812 176 10 13 chr20 38766536 38766849 -27901156 + AluJb SINE Alu 1 312 0 582 249 98 54 chr20 38766849 38766956 -27901049 - L1ME4a LINE L1 -468 5653 5552 357 259 131 38 chr20 38767050 38767166 -27900839 - L1ME4a LINE L1 -2347 5461 5323 2391 99 3 0 chr20 38767166 38767470 -27900535 - AluSx SINE Alu -5 307 3 357 259 131 38 chr20 38767470 38767537 -27900468 - L1ME4a LINE L1 -2485 5323 5264 603 357 84 49 chr20 38767597 38767780 -27900225 - L1ME4a LINE L1 -885 5261 5086 1279 191 18 0 chr20 38767780 38768000 -27900005 + MER58A DNA MER1_type 1 224 0 603 357 84 49 chr20 38768000 38768433 -27899572 - L1ME4a LINE L1 -1060 5086 4623 2458 63 0 21 chr20 38768466 38768798 -27899207 + L1PA13 LINE L1 5835 6159 -4 341 304 55 55 chr20 38768930 38769111 -27898894 - L1ME4a LINE L1 -1768 4378 4198 479 306 249 10 chr20 38769172 38769473 -27898532 - L3 LINE CR1 -342 1235 863 212 77 26 0 chr20 38769477 38769516 -27898489 + (CAAAAA)n Simple_repeat Simple_repeat 2 41 0 480 164 125 39 chr20 38769516 38769644 -27898361 - L1ME3A LINE L1 -5 6165 6027 251 218 148 20 chr20 38769760 38769861 -27898144 - MLT1K LTR MaLR -7 581 468 598 291 83 67 chr20 38769899 38770226 -27897779 - MLT1K LTR MaLR -236 352 21 261 172 172 16 chr20 38770318 38770382 -27897623 + MER3 DNA MER1_type 1 74 -135 371 236 55 79 chr20 38770461 38770500 -27897505 - L3 LINE CR1 -903 674 636 2278 94 3 7 chr20 38770500 38770799 -27897206 + AluSx SINE Alu 1 298 -14 371 236 55 79 chr20 38770799 38770924 -27897081 - L3 LINE CR1 -941 636 514 21 36 0 0 chr20 38770967 38770995 -27897010 + AT_rich Low_complexity Low_complexity 1 28 0 2394 102 0 0 chr20 38770998 38771293 -27896712 + AluSx SINE Alu 1 295 -17 262 304 89 27 chr20 38771372 38771484 -27896521 - L2 LINE L2 -4 3268 3150 1663 178 0 41 chr20 38771555 38771848 -27896157 + AluJb SINE Alu 2 282 -30 288 353 60 73 chr20 38772318 38772536 -27895469 - L3 LINE CR1 -1021 556 342 2115 120 6 43 chr20 38772563 38772887 -27895118 - AluSx SINE Alu 0 312 1 404 254 31 76 chr20 38773422 38773646 -27894359 - MLT1H LTR MaLR -3 546 333 275 254 0 0 chr20 38773790 38773853 -27894152 - MLT1F LTR MaLR -459 83 21 427 190 198 9 chr20 38774412 38774528 -27893477 + MIR SINE MIR 16 153 -109 339 25 0 0 chr20 38775720 38775760 -27892245 + (TA)n Simple_repeat Simple_repeat 1 40 0 381 93 0 0 chr20 38775760 38775814 -27892191 + (GA)n Simple_repeat Simple_repeat 1 54 0 707 262 129 9 chr20 38776448 38776673 -27891332 - MIR SINE MIR -6 256 5 28 0 0 0 chr20 38777160 38777188 -27890817 + AT_rich Low_complexity Low_complexity 1 28 0 1580 193 67 22 chr20 38777709 38778067 -27889938 - MLT1A2 LTR MaLR 0 374 1 359 256 216 7 chr20 38778587 38778733 -27889272 - MLT1J2 LTR MaLR 0 555 379 429 254 53 0 chr20 38778765 38778879 -27889126 - MLT1J2 LTR MaLR -284 271 152 271 93 74 167 chr20 38779076 38779184 -27888821 + L1MB7 LINE L1 5997 6094 -90 901 98 15 74 chr20 38779266 38779313 -27888692 - MER33 DNA MER1_type -2261 363 315 1861 174 3 0 chr20 38779313 38779606 -27888399 - AluJo SINE Alu -18 294 1 901 98 15 74 chr20 38779606 38779761 -27888244 - MER33 DNA MER1_type -2309 315 173 1988 135 20 13 chr20 38779761 38780083 -27887922 - AluSq SINE Alu 0 313 1 1128 76 0 0 chr20 38780085 38780217 -27887788 - AluSq/x SINE Alu -181 132 1 309 289 24 0 chr20 38780247 38780330 -27887675 - MER33 DNA MER1_type -239 85 1 648 225 66 6 chr20 38780367 38780549 -27887456 - MLT1J2 LTR MaLR -255 195 3 524 269 42 24 chr20 38780906 38781073 -27886932 + MIR SINE MIR 8 177 -85 2430 94 0 0 chr20 38781483 38781790 -27886215 - AluSg SINE Alu -3 307 1 435 163 22 33 chr20 38782141 38782233 -27885772 - MIR SINE MIR -93 169 79 706 308 21 26 chr20 38783330 38783564 -27884441 + MIR SINE MIR 24 256 -6 3066 160 14 14 chr20 38783632 38784189 -27883816 + L1MB8 LINE L1 5622 6178 0 781 219 66 10 chr20 38784214 38784410 -27883595 - MIR SINE MIR -13 249 43 2588 52 0 7 chr20 38785098 38785406 -27882599 - AluY SINE Alu -5 306 1 335 237 44 13 chr20 38785466 38785579 -27882426 - MIR SINE MIR -62 146 32 2219 126 0 3 chr20 38785659 38785969 -27882036 + AluSg SINE Alu 1 309 -1 386 241 175 1 chr20 38786092 38786224 -27881781 + MIR SINE MIR 3 155 -62 2282 150 42 5 chr20 38786564 38786945 -27881060 - L1MB5 LINE L1 0 6174 5780 765 264 74 17 chr20 38787201 38787432 -27880573 + MIR SINE MIR 15 258 -4 2267 124 0 0 chr20 38787481 38787788 -27880217 - AluSx SINE Alu -5 307 1 235 268 56 0 chr20 38787959 38788030 -27879975 + L2 LINE L2 3154 3228 -44 1204 192 11 49 chr20 38788109 38788203 -27879802 - L1MD2 LINE L1 -15 6344 6248 1965 108 8 0 chr20 38788203 38788461 -27879544 - AluSx SINE Alu -15 297 38 1204 192 11 49 chr20 38788461 38788653 -27879352 - L1MD2 LINE L1 -111 6248 6069 562 181 67 0 chr20 38788660 38788809 -27879196 + MER33 DNA MER1_type 160 318 -6 284 211 13 53 chr20 38788812 38788888 -27879117 - L1ME2 LINE L1 -125 6039 5967 2280 110 10 3 chr20 38788966 38789274 -27878731 - AluSx SINE Alu -2 310 1 954 149 8 30 chr20 38789274 38789463 -27878542 - L1MB5 LINE L1 -564 5607 5412 264 210 40 70 chr20 38789446 38789546 -27878459 - L1ME3 LINE L1 -211 5951 5855 * 2237 111 0 43 chr20 38789729 38790053 -27877952 - AluSx SINE Alu -2 310 1 709 279 122 54 chr20 38790058 38790484 -27877521 - L2 LINE L2 -12 3301 2847 249 178 44 0 chr20 38791229 38791274 -27876731 - L2 LINE L2 -1 3271 3225 792 191 0 0 chr20 38791370 38791543 -27876462 + GA-rich Low_complexity Low_complexity 4 176 0 912 186 166 0 chr20 38791641 38791888 -27876117 - MER33 DNA MER1_type 0 324 37 303 169 34 101 chr20 38792119 38792208 -27875797 + L2 LINE L2 3153 3235 -37 906 202 22 22 chr20 38792300 38792483 -27875522 - MER5A DNA MER1_type -6 183 1 1731 105 0 0 chr20 38792587 38792815 -27875190 + 7SLRNA srpRNA srpRNA 5 232 -88 1572 186 158 40 chr20 38793226 38793550 -27874455 - MLT1F LTR MaLR -8 534 135 2303 92 34 0 chr20 38793550 38793844 -27874161 - AluSx SINE Alu -8 304 1 1572 186 158 40 chr20 38793844 38793993 -27874012 - MLT1F LTR MaLR -407 135 5 542 278 127 12 chr20 38794163 38794336 -27873669 - MIR SINE MIR -19 243 51 614 235 25 55 chr20 38794623 38794823 -27873182 + MIR SINE MIR 69 262 0 2361 89 7 3 chr20 38795786 38796088 -27871917 - AluSq SINE Alu -10 303 1 1327 218 73 6 chr20 38796126 38796443 -27871562 - MER58B DNA MER1_type -3 338 1 192 279 33 33 chr20 38796480 38796541 -27871464 - L3 LINE CR1 -50 1527 1467 882 248 133 44 chr20 38796645 38797073 -27870932 - L1ME4a LINE L1 -6 6115 5650 2323 90 3 10 chr20 38797128 38797427 -27870578 - AluSq SINE Alu -16 297 1 293 173 67 0 chr20 38797511 38797586 -27870419 - L1ME1 LINE L1 -165 6001 5922 255 305 28 0 chr20 38797641 38797782 -27870223 - L1M4 LINE L1 -3800 2346 2202 469 251 155 64 chr20 38798347 38798566 -27869439 + MIR SINE MIR 24 262 0 228 176 0 39 chr20 38799056 38799107 -27868898 + GA-rich Low_complexity Low_complexity 5 53 0 24 0 0 0 chr20 38799364 38799388 -27868617 + AT_rich Low_complexity Low_complexity 1 24 0 326 211 211 10 chr20 38799389 38799493 -27868512 - L2 LINE L2 -1 3312 3188 327 338 92 79 chr20 38799895 38800200 -27867805 - L2 LINE L2 -10 3262 2954 2046 122 14 10 chr20 38800200 38800494 -27867511 + AluJb SINE Alu 1 295 -17 1363 201 55 0 chr20 38800492 38800781 -27867224 - L1ME1 LINE L1 -372 5806 5502 684 210 15 132 chr20 38801699 38801971 -27866034 + MIR SINE MIR 2 241 -21 880 201 0 30 chr20 38802165 38802360 -27865645 - FRAM SINE Alu 0 176 1 556 267 46 74 chr20 38802523 38802863 -27865142 - L2 LINE L2 -159 3113 2782 232 222 28 56 chr20 38803539 38803611 -27864394 + L2 LINE L2 3191 3260 -12 404 241 54 9 chr20 38803657 38803769 -27864236 - MIR SINE MIR -75 187 71 235 279 59 0 chr20 38804034 38804102 -27863903 + MER91C DNA MER1_type 18 89 -51 1293 189 0 0 chr20 38804198 38804420 -27863585 - MER58A DNA MER1_type 0 224 3 737 171 0 16 chr20 38804470 38804599 -27863406 + FLAM_A SINE Alu 1 127 -6 1643 120 127 0 chr20 38804605 38804872 -27863133 + AluY SINE Alu 1 301 0 815 163 0 34 chr20 38804887 38805034 -27862971 + FLAM_C SINE Alu 1 142 -1 275 340 84 39 chr20 38805367 38805570 -27862435 + MIR SINE MIR 3 214 -48 2325 125 0 0 chr20 38805580 38805891 -27862114 - AluSx SINE Alu -1 311 1 23 0 0 0 chr20 38805898 38805921 -27862084 + AT_rich Low_complexity Low_complexity 1 23 0 216 320 78 29 chr20 38806646 38806749 -27861256 - L2 LINE L2 -47 3225 3118 180 0 0 0 chr20 38806868 38806888 -27861117 + (TG)n Simple_repeat Simple_repeat 2 21 0 196 382 30 15 chr20 38806924 38807055 -27860950 - L2 LINE L2 -263 3009 2877 435 238 38 9 chr20 38807110 38807215 -27860790 + MER91C DNA MER1_type 12 119 -21 288 336 26 0 chr20 38807219 38807335 -27860670 - L2 LINE L2 -493 2821 2703 596 216 146 16 chr20 38807349 38807534 -27860471 + MER3 DNA MER1_type 1 209 0 925 277 97 12 chr20 38808158 38808479 -27859526 - MER115 DNA AcHobo -328 365 18 468 0 0 0 chr20 38808692 38808744 -27859261 + (CA)n Simple_repeat Simple_repeat 2 53 0 604 301 82 0 chr20 38808922 38809128 -27858877 - MIR SINE MIR -28 234 12 258 279 0 0 chr20 38809147 38809215 -27858790 + MIR SINE MIR 195 262 0 236 207 17 0 chr20 38809262 38809320 -27858685 + MIR SINE MIR 112 170 -92 415 300 140 12 chr20 38809977 38810234 -27857771 + L2 LINE L2 2593 2882 -432 347 310 31 8 chr20 38810433 38810562 -27857443 + L2 LINE L2 3141 3272 0 842 186 108 0 chr20 38811020 38811225 -27856780 + MIR SINE MIR 30 262 0 272 262 55 103 chr20 38811226 38811333 -27856672 - MIR SINE MIR -7 255 155 2201 126 0 7 chr20 38811333 38811635 -27856370 + AluSx SINE Alu 1 300 -12 272 262 55 103 chr20 38811635 38811672 -27856333 - MIR SINE MIR -107 155 118 816 196 6 12 chr20 38811672 38811835 -27856170 + MER3 DNA MER1_type 1 162 -47 241 284 0 14 chr20 38811870 38811944 -27856061 - MIR SINE MIR -149 113 41 612 285 56 101 chr20 38812317 38812784 -27855221 - L2 LINE L2 0 3272 2827 563 267 88 58 chr20 38812783 38813023 -27854982 + MIR SINE MIR 16 262 0 * 202 361 0 0 chr20 38813043 38813104 -27854901 + (CTG)n Simple_repeat Simple_repeat 2 62 0 198 343 105 17 chr20 38813114 38813295 -27854710 - L2 LINE L2 -482 2832 2636 187 351 19 92 chr20 38814159 38814421 -27853584 + L2 LINE L2 2545 2787 -527 378 171 0 14 chr20 38815153 38815223 -27852782 - MIR SINE MIR -108 154 86 834 168 23 0 chr20 38815582 38815891 -27852114 + CT-rich Low_complexity Low_complexity 1 316 0 703 275 7 21 chr20 38815922 38816396 -27851609 + CT-rich Low_complexity Low_complexity 1 467 0 1445 149 15 8 chr20 38816408 38816676 -27851329 - L1MB3 LINE L1 -2 6181 5912 2293 92 3 0 chr20 38816680 38816985 -27851020 + AluSp SINE Alu 1 306 0 1067 156 0 0 chr20 38816995 38817155 -27850850 + AluSg/x SINE Alu 136 295 -17 3824 176 94 8 chr20 38817155 38818345 -27849660 - L1MB3 LINE L1 -263 5920 4606 2089 124 0 0 chr20 38818353 38818662 -27849343 + AluSx SINE Alu 11 319 0 337 44 0 0 chr20 38818674 38818719 -27849286 - MADE1 DNA Mariner -35 45 1 359 206 69 69 chr20 38819180 38819369 -27848636 - MER5A DNA MER1_type 0 189 1 506 282 38 66 chr20 38819540 38819613 -27848392 + MIR SINE MIR 47 121 -141 2148 101 10 14 chr20 38819613 38819909 -27848096 - AluSx SINE Alu -17 295 1 506 282 38 66 chr20 38819909 38820048 -27847957 + MIR SINE MIR 121 253 -9 200 281 35 0 chr20 38820861 38820918 -27847087 - L2 LINE L2 -26 3246 3188 579 163 172 62 chr20 38821167 38821230 -27846775 - Charlie4 DNA MER1_type 0 1961 1906 2364 102 0 0 chr20 38821230 38821525 -27846480 - AluSx SINE Alu -17 295 1 579 163 172 62 chr20 38821525 38821670 -27846335 - Charlie4 DNA MER1_type -55 1906 1730 * 688 218 39 17 chr20 38821655 38821834 -27846171 - Charlie4 DNA MER1_type -1752 209 27 212 292 35 111 chr20 38822106 38822250 -27845755 - L2 LINE L2 -246 3067 2935 896 195 43 0 chr20 38822809 38822973 -27845032 + FRAM SINE Alu 1 171 -5 930 87 0 0 chr20 38823321 38823459 -27844546 + (TCCA)n Simple_repeat Simple_repeat 1 138 0 214 246 33 0 chr20 38823460 38823521 -27844484 - L2 LINE L2 -10 3262 3200 215 323 86 0 chr20 38823526 38823619 -27844386 + L2 LINE L2 2960 3060 -253 362 246 135 8 chr20 38824160 38824286 -27843719 + MIR SINE MIR 113 254 -8 2570 199 28 44 chr20 38824912 38825480 -27842525 - MLT1F1 LTR MaLR -8 559 1 2302 97 37 3 chr20 38826099 38826399 -27841606 - AluSx SINE Alu -2 310 1 632 171 11 28 chr20 38826982 38827163 -27840842 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 1581 219 75 20 chr20 38828535 38828800 -27839205 - MLT1C LTR MaLR -4 463 163 1985 159 6 16 chr20 38828800 38829115 -27838890 - AluJo SINE Alu 0 312 1 1581 219 75 20 chr20 38829115 38829287 -27838718 - MLT1C LTR MaLR -304 163 2 1175 187 130 53 chr20 38829737 38829788 -27838217 - L1ME3A LINE L1 0 6170 6124 2051 143 3 7 chr20 38829788 38830096 -27837909 - AluSx SINE Alu -5 307 1 1175 187 130 53 chr20 38830096 38830345 -27837660 - L1ME3A LINE L1 -46 6124 5896 1987 145 10 32 chr20 38830345 38830531 -27837474 - AluJo SINE Alu -8 304 125 2324 76 4 0 chr20 38830531 38830838 -27837167 + AluSc SINE Alu 1 308 0 1987 145 10 32 chr20 38830838 38830961 -27837044 - AluJo SINE Alu -187 125 1 2579 74 0 0 chr20 38830970 38831281 -27836724 - AluY SINE Alu 0 311 1 1175 187 130 53 chr20 38831281 38831350 -27836655 - L1ME3A LINE L1 -281 5889 5827 2259 109 0 10 chr20 38831350 38831652 -27836353 - AluSx SINE Alu -13 299 1 1175 187 130 53 chr20 38831652 38831912 -27836093 - L1ME3A LINE L1 -343 5827 5481 1635 87 5 0 chr20 38831912 38832119 -27835886 - AluSq SINE Alu -10 303 96 516 83 0 115 chr20 38832129 38832198 -27835807 + MER5A DNA MER1_type 7 64 -125 1421 180 31 63 chr20 38832198 38832515 -27835490 + AluJo SINE Alu 1 307 -5 516 83 0 115 chr20 38832515 38832541 -27835464 + MER5A DNA MER1_type 64 91 -98 1997 152 0 19 chr20 38832673 38832982 -27835023 - AluSx SINE Alu -5 307 5 253 288 62 0 chr20 38832988 38833068 -27834937 + MER5B DNA MER1_type 46 130 -48 2400 98 0 0 chr20 38833079 38833376 -27834629 - AluSc SINE Alu -12 297 1 1418 243 107 40 chr20 38833393 38833726 -27834279 - MER92B LTR ERV1 -26 610 222 2281 91 31 0 chr20 38833726 38834013 -27833992 + AluSx SINE Alu 2 297 -15 1418 243 107 40 chr20 38834013 38834251 -27833754 - MER92B LTR ERV1 -414 222 1 218 252 36 81 chr20 38834358 38834469 -27833536 - L3b LINE CR1 -179 1404 1299 1807 158 7 23 chr20 38834479 38834782 -27833223 - AluJo SINE Alu -13 299 2 1470 164 39 0 chr20 38834795 38835081 -27832924 - L1MC2 LINE L1 0 6344 6048 502 203 32 17 chr20 38835161 38835304 -27832701 - L1MC1 LINE L1 -309 6035 5881 2057 132 3 17 chr20 38835310 38835605 -27832400 - AluSx SINE Alu -21 291 1 193 175 50 0 chr20 38835616 38835656 -27832349 + MER5B DNA MER1_type 125 166 -12 386 247 228 1 chr20 38835661 38835813 -27832192 + MER5A DNA MER1_type 1 189 0 785 172 0 0 chr20 38835899 38836027 -27831978 + FLAM_C SINE Alu 1 128 -5 321 158 0 79 chr20 38836100 38836176 -27831829 + L1MCa LINE L1 1995 2064 -4362 * 333 226 39 69 chr20 38836146 38836248 -27831757 - L1MC4 LINE L1 -1339 6703 6605 317 271 47 0 chr20 38836270 38836355 -27831650 - L1MC1 LINE L1 -1941 5867 5779 23 54 0 0 chr20 38836459 38836496 -27831509 + AT_rich Low_complexity Low_complexity 1 37 0 315 325 91 47 chr20 38836548 38836830 -27831175 - L1MC1 LINE L1 -2221 5587 5288 2337 101 3 0 chr20 38836830 38837127 -27830878 + AluSx SINE Alu 1 298 -14 315 325 91 47 chr20 38837127 38837164 -27830841 - L1MC1 LINE L1 -2520 5288 5254 970 270 164 11 chr20 38837402 38837835 -27830170 - MLT1K LTR MaLR -21 567 69 273 57 0 0 chr20 38838817 38838852 -27829153 + (CA)n Simple_repeat Simple_repeat 2 36 0 302 233 22 33 chr20 38841118 38841208 -27826797 - L2 LINE L2 0 3272 3184 23 33 0 0 chr20 38842604 38842634 -27825371 + AT_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr20 38842804 38842827 -27825178 + AT_rich Low_complexity Low_complexity 1 23 0 2157 133 0 3 chr20 38843195 38843503 -27824502 - AluSx SINE Alu -5 307 1 2019 87 0 4 chr20 38843824 38844078 -27823927 + AluSg SINE Alu 57 309 -1 1580 242 198 51 chr20 38844303 38844465 -27823540 - L2 LINE L2 -1362 1952 1815 1895 139 3 77 chr20 38844465 38844802 -27823203 - AluJo SINE Alu 0 312 1 1580 242 198 51 chr20 38844802 38845221 -27822784 - L2 LINE L2 -1499 1815 1459 2256 89 0 0 chr20 38845221 38845542 -27822463 - AluSq SINE Alu 0 321 1 1580 242 198 51 chr20 38845542 38845754 -27822251 - L2 LINE L2 -1855 1459 1039 180 0 0 0 chr20 38846495 38846515 -27821490 + (CGG)n Simple_repeat Simple_repeat 3 22 0 2485 71 16 0 chr20 38847306 38847614 -27820391 - AluSq SINE Alu 0 313 1 2469 83 0 3 chr20 38848712 38849014 -27818991 + AluSg SINE Alu 1 301 -9 1100 149 6 6 chr20 38849446 38849621 -27818384 + FAM SINE Alu 1 175 0 506 253 80 33 chr20 38849667 38849817 -27818188 - MIR SINE MIR -98 164 8 650 230 120 5 chr20 38850075 38850266 -27817739 - MIR SINE MIR -17 245 33 2176 131 3 10 chr20 38850284 38850463 -27817542 - AluSx SINE Alu 0 312 134 2117 97 49 0 chr20 38850463 38850751 -27817254 - AluSq SINE Alu -11 302 1 2176 131 3 10 chr20 38850751 38850885 -27817120 - AluSx SINE Alu -178 134 1 2151 137 0 0 chr20 38851919 38852218 -27815787 + AluJo SINE Alu 1 299 -13 884 192 18 18 chr20 38852914 38853081 -27814924 - MER20 DNA MER1_type 0 219 53 872 147 110 0 chr20 38853083 38853246 -27814759 + L1MB4 LINE L1 5996 6176 -4 459 45 30 30 chr20 38853246 38853313 -27814692 - MER20 DNA MER1_type -152 67 1 1322 125 28 5 chr20 38853448 38853664 -27814341 - L1MB3 LINE L1 -8 6175 5955 2212 100 13 3 chr20 38853668 38853969 -27814036 - AluSc SINE Alu -5 304 1 1505 106 5 0 chr20 38854132 38854330 -27813675 + AluSp SINE Alu 106 304 -9 764 286 70 30 chr20 38854336 38854637 -27813368 + L1MC4a LINE L1 5544 5856 -1952 274 123 105 0 chr20 38854659 38854716 -27813289 - MER3 DNA MER1_type -25 184 122 234 289 22 0 chr20 38854797 38854887 -27813118 + (TA)n Simple_repeat Simple_repeat 2 93 0 270 234 72 36 chr20 38854934 38855045 -27812960 + L1MC4a LINE L1 6061 6175 -1633 1805 149 17 27 chr20 38855265 38855561 -27812444 - AluJb SINE Alu -19 293 1 432 272 8 24 chr20 38856458 38856583 -27811422 + MIR SINE MIR 29 151 -111 1759 171 31 0 chr20 38857500 38857787 -27810218 + AluSx SINE Alu 1 296 -16 263 217 60 12 chr20 38859003 38859086 -27808919 + L2 LINE L2 2966 3052 -220 2042 137 0 3 chr20 38859152 38859466 -27808539 - AluSx SINE Alu 0 313 1 698 240 16 0 chr20 38859656 38859844 -27808161 - MIR SINE MIR -43 219 30 195 280 67 40 chr20 38860767 38860842 -27807163 - MIR SINE MIR -117 145 69 2565 164 69 27 chr20 38862086 38862640 -27805365 + L1MB8 LINE L1 5601 6177 -1 273 320 89 57 chr20 38862792 38862840 -27805165 - MIR SINE MIR -6 256 211 2116 130 3 0 chr20 38862840 38863139 -27804866 - AluSx SINE Alu -12 300 1 273 320 89 57 chr20 38863139 38863337 -27804668 - MIR SINE MIR -51 211 2 2395 105 0 3 chr20 38863493 38863807 -27804198 - AluSq SINE Alu 0 313 1 289 57 0 0 chr20 38863838 38863873 -27804132 + U2 snRNA snRNA 1 35 -153 2462 64 0 0 chr20 38864473 38864769 -27803236 + AluY SINE Alu 1 296 -15 223 256 89 44 chr20 38865114 38865204 -27802801 + L2 LINE L2 3004 3097 -175 1717 154 45 119 chr20 38865220 38865578 -27802427 - L1MC4a LINE L1 0 7808 7425 770 167 0 30 chr20 38865578 38865710 -27802295 - FLAM_A SINE Alu -5 128 1 1717 154 45 119 chr20 38865710 38865741 -27802264 - L1MC4a LINE L1 -383 7425 7393 2208 105 44 7 chr20 38865741 38866036 -27801969 + AluSq SINE Alu 1 306 -7 1717 154 45 119 chr20 38866036 38866133 -27801872 - L1MC4a LINE L1 -415 7393 7357 2175 161 80 64 chr20 38866160 38866726 -27801279 - L1MD1 LINE L1 -17 6225 5651 191 196 43 0 chr20 38866828 38866874 -27801131 + L2 LINE L2 3225 3272 0 2084 130 7 0 chr20 38868976 38869275 -27798730 - AluSx SINE Alu -11 301 1 2087 94 30 20 chr20 38869638 38869936 -27798069 - AluY SINE Alu -10 301 1 349 255 64 0 chr20 38870067 38870161 -27797844 - MLT1K LTR MaLR -347 241 142 1836 127 0 62 chr20 38870616 38870938 -27797067 - AluSx SINE Alu -10 302 1 813 147 0 0 chr20 38870970 38871086 -27796919 + FLAM_C SINE Alu 1 116 -27 183 42 0 0 chr20 38871087 38871111 -27796894 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1169 124 90 0 chr20 38872579 38872757 -27795248 + MER7A DNA MER2_type 2 193 -153 360 239 78 28 chr20 38873864 38874006 -27793999 - MIR SINE MIR -93 169 21 2383 86 13 13 chr20 38874127 38874440 -27793565 + AluSp SINE Alu 1 313 0 450 160 27 0 chr20 38874489 38874564 -27793441 - AluJ/FRAM SINE Alu -12 300 224 820 184 0 0 chr20 38874566 38874691 -27793314 - AluJo/FLAM SINE Alu -187 125 1 303 253 63 0 chr20 38874780 38874875 -27793130 + MER103 DNA DNA 18 118 -48 2715 35 0 6 chr20 38874991 38875304 -27792701 + AluY SINE Alu 1 311 0 2915 7 0 0 chr20 38875317 38875627 -27792378 + AluYa5 SINE Alu 1 310 -1 181 247 21 93 chr20 38875728 38875825 -27792180 + MER5A DNA MER1_type 1 90 -99 358 155 106 84 chr20 38875934 38875995 -27792010 - L1MC5 LINE L1 -217 7744 7686 2324 97 7 0 chr20 38875995 38876295 -27791710 + AluSg SINE Alu 1 302 -8 358 155 106 84 chr20 38876295 38876375 -27791630 - L1MC5 LINE L1 -275 7686 7600 864 200 0 0 chr20 38876787 38876937 -27791068 + AluJb SINE Alu 146 295 -17 493 242 16 24 chr20 38877206 38877330 -27790675 - MER94 DNA DNA -11 123 1 561 301 31 31 chr20 38877776 38878002 -27790003 + MLT1K LTR MaLR 3 228 -360 414 228 78 90 chr20 38878132 38878207 -27789798 + MLT1K LTR MaLR 424 498 -90 2159 131 0 10 chr20 38878207 38878521 -27789484 - AluSq SINE Alu -2 311 1 414 228 78 90 chr20 38878521 38878612 -27789393 + MLT1K LTR MaLR 498 588 0 475 317 66 16 chr20 38879136 38879319 -27788686 + MIR3 SINE MIR 9 200 -8 1542 108 9 0 chr20 38879321 38879533 -27788472 + AluSg/x SINE Alu 79 292 -18 2138 120 7 7 chr20 38879628 38879937 -27788068 - AluSx SINE Alu -3 309 1 250 215 76 13 chr20 38880910 38880989 -27787016 - MIR SINE MIR 0 262 179 219 339 93 0 chr20 38881311 38881429 -27786576 - MER5A DNA MER1_type -6 183 55 * 262 256 78 11 chr20 38881340 38881430 -27786575 + MER5A DNA MER1_type 51 146 -43 521 273 147 5 chr20 38882607 38882805 -27785200 + MIR SINE MIR 23 248 -14 523 246 63 16 chr20 38883678 38883869 -27784136 + MIR SINE MIR 1 200 -62 2307 110 0 3 chr20 38884235 38884544 -27783461 - AluSc SINE Alu -1 308 1 671 246 23 11 chr20 38884795 38884970 -27783035 + MER5B DNA MER1_type 2 178 0 322 236 186 25 chr20 38885355 38885516 -27782489 - Charlie8 DNA MER1_type -2174 243 57 614 178 231 29 chr20 38885732 38885940 -27782065 + MER112 DNA MER1_type 1 250 -10 1986 128 17 0 chr20 38886203 38886491 -27781514 + AluSx SINE Alu 1 293 -19 467 304 62 33 chr20 38887236 38887512 -27780493 - L3 LINE CR1 -154 1423 1140 305 270 123 98 chr20 38887780 38887984 -27780021 + L2 LINE L2 3094 3302 -11 2091 117 3 16 chr20 38888360 38888667 -27779338 - AluSx SINE Alu -9 303 1 294 95 0 0 chr20 38889881 38889923 -27778082 + (TCTG)n Simple_repeat Simple_repeat 3 44 0 709 139 0 0 chr20 38889923 38890024 -27777981 - FLAM_C SINE Alu -28 115 15 740 288 55 0 chr20 38890335 38890554 -27777451 + MIR SINE MIR 14 244 -18 2013 123 3 7 chr20 38890885 38891192 -27776813 + AluSx SINE Alu 1 306 0 514 246 8 0 chr20 38891291 38891413 -27776592 + LTR47B LTR ERVL 1 123 -320 713 268 34 30 chr20 38891528 38891793 -27776212 - L1MC4a LINE L1 -1894 5914 5649 2139 122 0 13 chr20 38891815 38892126 -27775879 - AluSg SINE Alu -3 307 1 1857 214 82 65 chr20 38893121 38893485 -27774520 - L1ME3A LINE L1 -3 6167 5788 911 220 18 31 chr20 38893485 38893712 -27774293 + MER58A DNA MER1_type 1 224 0 1857 214 82 65 chr20 38893712 38893946 -27774059 - L1ME3A LINE L1 -382 5788 5559 181 200 0 25 chr20 38894952 38894992 -27773013 + MER5B DNA MER1_type 103 141 -37 400 248 18 28 chr20 38895249 38895358 -27772647 - MIR SINE MIR -50 212 105 1078 248 90 16 chr20 38895431 38895753 -27772252 - MLT1I LTR MaLR -6 403 58 25 65 0 0 chr20 38895943 38895989 -27772016 + AT_rich Low_complexity Low_complexity 1 46 0 207 69 0 0 chr20 38896147 38896176 -27771829 + (TG)n Simple_repeat Simple_repeat 1 29 0 21 71 0 0 chr20 38896234 38896276 -27771729 + AT_rich Low_complexity Low_complexity 1 42 0 6090 132 19 10 chr20 38896277 38897250 -27770755 - L1MA6 LINE L1 -3 6297 5317 3344 163 30 11 chr20 38898330 38898998 -27769007 - L1MA6 LINE L1 -814 5332 4652 612 247 96 32 chr20 38898978 38899210 -27768795 - L1MC/D LINE L1 -398 5768 5580 * 605 238 48 12 chr20 38900147 38900315 -27767690 + MIR SINE MIR 89 262 0 6155 199 97 55 chr20 38900471 38901476 -27766529 - L1MC4a LINE L1 -2 7806 6693 2382 101 0 3 chr20 38901476 38901783 -27766222 + AluSx SINE Alu 1 306 -6 6155 199 97 55 chr20 38901783 38902559 -27765446 - L1MC4a LINE L1 -1115 6693 5951 249 98 24 0 chr20 38902572 38902613 -27765392 - L1ME4a LINE L1 0 6121 6080 2080 117 28 3 chr20 38902741 38903031 -27764974 - AluSx SINE Alu -12 300 4 335 339 8 34 chr20 38903260 38903378 -27764627 + MIR SINE MIR 30 144 -64 2286 111 0 7 chr20 38903718 38904025 -27763980 - AluSg SINE Alu -5 305 1 1361 243 161 29 chr20 38904061 38904719 -27763286 - HAL1b LINE L1 0 1348 604 377 234 75 0 chr20 38904760 38904867 -27763138 - HAL1b LINE L1 -837 511 397 1786 141 48 17 chr20 38904920 38905211 -27762794 + AluJo SINE Alu 5 304 -8 341 290 78 56 chr20 38905773 38906004 -27762001 + MIR SINE MIR 12 247 -15 27 0 0 0 chr20 38906158 38906185 -27761820 + AT_rich Low_complexity Low_complexity 1 27 0 245 26 0 51 chr20 38906339 38906378 -27761627 - L1MA3 LINE L1 -5 6300 6264 2006 104 47 13 chr20 38907050 38907349 -27760656 - AluSx SINE Alu -3 309 1 2175 133 0 0 chr20 38908163 38908465 -27759540 + AluSx SINE Alu 1 302 -10 2362 65 3 53 chr20 38908906 38909228 -27758777 - AluY SINE Alu -5 306 1 313 368 68 15 chr20 38909265 38909398 -27758607 - MIR3 SINE MIR -27 181 42 1062 227 15 27 chr20 38910254 38910319 -27757686 - MIR SINE MIR 0 262 198 1544 170 122 19 chr20 38910319 38910630 -27757375 - MER2 DNA MER2_type 0 344 2 1062 227 15 27 chr20 38910630 38910824 -27757181 - MIR SINE MIR -64 198 6 972 246 130 19 chr20 38912280 38912420 -27755585 - L1ME4a LINE L1 0 6121 5998 267 54 0 0 chr20 38912420 38912457 -27755548 + (TG)n Simple_repeat Simple_repeat 2 38 0 972 246 130 19 chr20 38912457 38912738 -27755267 - L1ME4a LINE L1 -123 5998 5653 363 191 99 43 chr20 38912734 38912875 -27755130 - L1MC5 LINE L1 -30 7931 7783 * 340 198 10 5 chr20 38912933 38913036 -27754969 + MIR SINE MIR 4 156 -106 299 98 0 131 chr20 38913037 38913098 -27754907 + MER3 DNA MER1_type 41 93 -116 * 432 232 0 10 chr20 38913065 38913164 -27754841 - MER3 DNA MER1_type -13 196 99 2315 95 3 19 chr20 38913164 38913480 -27754525 - AluSp SINE Alu -2 311 1 183 80 0 0 chr20 38913490 38913515 -27754490 + (T)n Simple_repeat Simple_repeat 1 25 0 535 246 0 0 chr20 38913515 38913625 -27754380 - MER3 DNA MER1_type -93 116 7 445 324 125 17 chr20 38913699 38913875 -27754130 - MER91A DNA MER1_type -1 195 1 208 100 25 25 chr20 38913897 38913937 -27754068 + (TTA)n Simple_repeat Simple_repeat 2 41 0 296 298 78 54 chr20 38913980 38914222 -27753783 - L1ME4a LINE L1 -562 5559 5312 23 0 0 0 chr20 38914375 38914398 -27753607 + AT_rich Low_complexity Low_complexity 1 23 0 2316 105 3 0 chr20 38915058 38915354 -27752651 + AluSq SINE Alu 1 297 -16 243 312 32 71 chr20 38915530 38915684 -27752321 - L2 LINE L2 -177 3095 2948 1045 270 160 18 chr20 38915732 38916189 -27751816 + L2 LINE L2 2794 3309 -4 308 322 98 28 chr20 38916191 38916446 -27751559 - L2 LINE L2 -447 2867 2595 25 31 0 0 chr20 38916777 38916809 -27751196 + AT_rich Low_complexity Low_complexity 1 32 0 2004 140 0 0 chr20 38916862 38917186 -27750819 - AluSx SINE Alu 0 324 1 2024 107 28 10 chr20 38918616 38918907 -27749098 - AluSq SINE Alu -17 296 1 302 336 82 8 chr20 38919728 38919862 -27748143 - MIR SINE MIR -9 253 110 2511 50 0 10 chr20 38923882 38924180 -27743825 - AluY SINE Alu -16 295 1 310 228 88 26 chr20 38924754 38924868 -27743137 + MIR SINE MIR 34 154 -108 38 68 0 0 chr20 38924915 38924988 -27743017 + AT_rich Low_complexity Low_complexity 1 73 0 621 270 37 108 chr20 38925029 38925579 -27742426 + L2 LINE L2 2726 3313 0 441 240 170 21 chr20 38925647 38925814 -27742191 - MIR SINE MIR -34 228 38 430 329 24 18 chr20 38926623 38926790 -27741215 - L2 LINE L2 0 3272 3105 313 309 145 34 chr20 38927050 38927257 -27740748 - L2 LINE L2 -2 3270 3041 2630 182 94 2 chr20 38927711 38928256 -27739749 - L1MB5 LINE L1 -8 6166 5572 234 298 125 10 chr20 38930502 38930606 -27737399 - L2 LINE L2 -237 3035 2920 256 245 53 11 chr20 38930667 38930761 -27737244 - L1ME LINE L1 -455 5666 5569 30 69 0 0 chr20 38930871 38930929 -27737076 + AT_rich Low_complexity Low_complexity 1 58 0 28 79 0 0 chr20 38931022 38931085 -27736920 + AT_rich Low_complexity Low_complexity 1 63 0 1990 132 7 16 chr20 38931146 38931456 -27736549 - AluSx SINE Alu -5 307 1 2310 106 0 3 chr20 38931781 38932084 -27735921 + AluSx SINE Alu 1 302 -10 2142 117 0 3 chr20 38932349 38932640 -27735365 - AluSx SINE Alu -16 296 7 25 51 0 0 chr20 38932879 38932918 -27735087 + AT_rich Low_complexity Low_complexity 1 39 0 275 310 53 0 chr20 38933047 38933160 -27734845 + L1ME LINE L1 5695 5813 -308 439 265 98 8 chr20 38933746 38933878 -27734127 + MIR3 SINE MIR 2 145 -63 188 250 62 0 chr20 38934044 38934092 -27733913 + L2 LINE L2 3217 3267 -5 204 338 38 31 chr20 38934447 38934607 -27733398 - L2 LINE L2 -213 3059 2899 633 90 0 0 chr20 38935239 38935317 -27732688 - MADE1 DNA Mariner 0 80 3 2642 161 37 66 chr20 38935480 38935805 -27732200 - L1MB8 LINE L1 0 6178 5845 1986 147 83 57 chr20 38935805 38936226 -27731779 - MSTB1 LTR MaLR 0 432 1 2642 161 37 66 chr20 38936226 38937046 -27730959 - L1MB8 LINE L1 -333 5845 4947 2003 122 109 3 chr20 38937690 38938010 -27729995 - THE1B LTR MaLR -10 354 1 3131 164 32 4 chr20 38938828 38939383 -27728622 - L1MB3 LINE L1 -19 6164 5594 4531 133 9 58 chr20 38939390 38940205 -27727800 - L1MA7 LINE L1 -3 6288 5514 2283 107 3 16 chr20 38940469 38940778 -27727227 - AluSx SINE Alu -7 305 1 1127 168 69 0 chr20 38941308 38941511 -27726494 - AluJb SINE Alu -9 303 87 515 310 109 44 chr20 38941865 38941972 -27726033 - MIR SINE MIR -12 250 151 2004 94 32 14 chr20 38941972 38942271 -27725734 - AluSx SINE Alu 0 304 1 515 310 109 44 chr20 38942271 38942391 -27725614 - MIR SINE MIR -111 151 7 449 273 80 21 chr20 38942965 38943152 -27724853 - MIR SINE MIR -62 200 3 1554 166 71 17 chr20 38943172 38943467 -27724538 - AluJo SINE Alu 0 312 2 21 0 0 0 chr20 38945527 38945548 -27722457 + AT_rich Low_complexity Low_complexity 1 21 0 269 306 134 38 chr20 38945691 38945877 -27722128 - MIR SINE MIR -41 221 18 632 270 44 15 chr20 38945964 38946168 -27721837 - MIR SINE MIR -10 252 43 931 146 0 55 chr20 38946791 38946955 -27721050 - MER106B DNA MER1_type -903 156 2 21 71 0 0 chr20 38947183 38947225 -27720780 + AT_rich Low_complexity Low_complexity 1 42 0 275 299 68 63 chr20 38947360 38947458 -27720547 + L1ME LINE L1 5491 5587 -534 584 218 115 6 chr20 38947458 38947614 -27720391 - MER104 DNA MER2_type -3 177 5 275 299 68 63 chr20 38947614 38947736 -27720269 + L1ME LINE L1 5587 5712 -409 310 352 95 0 chr20 38949228 38949407 -27718598 - L3 LINE CR1 -694 883 688 2315 101 3 0 chr20 38949796 38950094 -27717911 - AluSp SINE Alu -14 299 1 2331 101 3 0 chr20 38950696 38950994 -27717011 + AluSx SINE Alu 1 299 -13 352 319 96 57 chr20 38951045 38951146 -27716859 - L2 LINE L2 0 3272 3176 2212 114 0 10 chr20 38951146 38951452 -27716553 - AluSx SINE Alu -9 303 1 352 319 96 57 chr20 38951452 38951735 -27716270 - L2 LINE L2 -96 3176 2873 * 627 198 124 37 chr20 38951731 38951948 -27716057 + MER5C DNA MER1_type 17 252 -72 217 215 13 38 chr20 38951999 38952012 -27715993 + MER5C DNA MER1_type 248 260 -64 2015 113 44 0 chr20 38952012 38952287 -27715718 - AluSx SINE Alu -25 287 1 217 215 13 38 chr20 38952287 38952352 -27715653 + MER5C DNA MER1_type 260 324 0 748 224 53 0 chr20 38952449 38952619 -27715386 + MER5A DNA MER1_type 3 181 -8 1648 155 19 4 chr20 38952787 38953058 -27714947 + AluJo SINE Alu 15 289 -23 24 0 0 0 chr20 38953049 38953073 -27714932 + AT_rich Low_complexity Low_complexity 1 24 0 475 229 181 21 chr20 38953525 38953669 -27714336 - L1ME2 LINE L1 -7 6157 5991 268 232 111 40 chr20 38953820 38953919 -27714086 + MIR SINE MIR 128 233 -29 1942 110 9 95 chr20 38954406 38954733 -27713272 - AluSx SINE Alu -13 299 1 834 133 8 0 chr20 38954750 38954870 -27713135 - AluJb SINE Alu -186 126 6 2318 120 0 0 chr20 38954879 38955187 -27712818 - AluSx SINE Alu -4 308 1 279 341 61 8 chr20 38955187 38955319 -27712686 - L1MEc LINE L1 -6213 183 45 749 248 107 30 chr20 38955319 38955581 -27712424 + MER102a DNA MER1_type 46 327 -3 26 0 0 0 chr20 38955643 38955669 -27712336 + AT_rich Low_complexity Low_complexity 1 26 0 2499 86 0 3 chr20 38956259 38956572 -27711433 + AluSx SINE Alu 1 312 0 180 286 22 55 chr20 38961197 38961288 -27706717 + MER5A DNA MER1_type 78 165 -24 2413 107 0 0 chr20 38961645 38961953 -27706052 - AluSx SINE Alu -4 308 1 1502 145 179 0 chr20 38963503 38963765 -27704240 - AluJb SINE Alu -3 309 1 2388 58 41 3 chr20 38963862 38964155 -27703850 - AluY SINE Alu -7 304 1 314 335 44 10 chr20 38964252 38964458 -27703547 + L1M1 LINE L1 5256 5468 -835 2353 87 0 0 chr20 38964791 38965078 -27702927 + AluSc SINE Alu 23 309 0 1010 96 0 0 chr20 38966446 38966571 -27701434 - FLAM_C SINE Alu -3 140 16 982 192 54 43 chr20 38966837 38967113 -27700892 - L1ME1 LINE L1 -5 6161 5883 265 271 52 12 chr20 38967113 38967229 -27700776 + MIR SINE MIR 42 161 -58 232 102 41 20 chr20 38967240 38967289 -27700716 + CT-rich Low_complexity Low_complexity 1 50 0 1738 156 19 42 chr20 38968531 38968839 -27699166 + AluJo SINE Alu 1 301 -11 727 229 63 5 chr20 38968873 38969102 -27698903 + MLT1G LTR MaLR 20 276 -279 418 142 123 28 chr20 38969140 38969246 -27698759 + MLT1G LTR MaLR 348 500 -67 661 179 15 0 chr20 38969441 38969575 -27698430 - FRAM SINE Alu -1 175 40 395 175 44 35 chr20 38970693 38970807 -27697198 + MER74B LTR ERVL 508 622 0 487 204 104 18 chr20 38971237 38971293 -27696712 - MIR SINE MIR 0 262 212 1917 201 29 36 chr20 38971293 38971820 -27696185 - Charlie1b DNA MER1_type 0 523 1 487 204 104 18 chr20 38971820 38971937 -27696068 - MIR SINE MIR -50 212 62 2164 142 0 0 chr20 38973217 38973527 -27694478 - AluSx SINE Alu -2 310 1 473 313 24 12 chr20 38973789 38973955 -27694050 - MIR SINE MIR -84 178 11 512 326 17 6 chr20 38974354 38974526 -27693479 + MER5A DNA MER1_type 7 180 -9 * 514 313 62 0 chr20 38974510 38974702 -27693303 + L2 LINE L2 2915 3118 -195 197 333 17 50 chr20 38974789 38974909 -27693096 + L2 LINE L2 3139 3254 -59 955 185 6 0 chr20 38975246 38975408 -27692597 + FRAM SINE Alu 1 163 -3 254 250 62 31 chr20 38976120 38976216 -27691789 - MIR SINE MIR -94 168 70 207 320 40 16 chr20 38976250 38976375 -27691630 + L3 LINE CR1 399 526 -1051 204 283 17 0 chr20 38976417 38976477 -27691528 + L3 LINE CR1 1174 1234 -343 189 0 0 0 chr20 38976539 38976560 -27691445 + (T)n Simple_repeat Simple_repeat 1 21 0 2377 125 0 0 chr20 38976571 38976883 -27691122 + AluSx SINE Alu 1 312 0 976 244 95 54 chr20 38976906 38977275 -27690730 + MLT1C LTR MaLR 83 466 -1 330 297 225 4 chr20 38977277 38977553 -27690452 + L3 LINE CR1 1233 1569 -8 25 0 0 0 chr20 38978051 38978076 -27689929 + AT_rich Low_complexity Low_complexity 1 25 0 2272 100 7 7 chr20 38978254 38978553 -27689452 + AluSx SINE Alu 1 299 -13 2244 96 4 0 chr20 38979466 38979780 -27688225 + AluSq SINE Alu 1 315 0 1148 199 34 19 chr20 38979810 38980072 -27687933 + L1MB4 LINE L1 5914 6179 -1 441 298 74 24 chr20 38980247 38980496 -27687509 + L1MC4a LINE L1 5702 5961 -160 2192 112 3 13 chr20 38980653 38980958 -27687047 - AluSx SINE Alu -10 302 1 350 275 156 6 chr20 38980986 38981146 -27686859 - L1ME3 LINE L1 -8 6154 5971 244 185 19 56 chr20 38981167 38981185 -27686820 - L1MC2 LINE L1 -1 7981 7964 2366 63 3 3 chr20 38981185 38981469 -27686536 + AluY SINE Alu 17 300 -11 244 185 19 56 chr20 38981469 38981846 -27686159 - L1MC2 LINE L1 -18 7964 6149 935 221 51 97 chr20 38981914 38982166 -27685839 - L1ME3 LINE L1 -208 5962 5700 1170 46 0 0 chr20 38982166 38982317 -27685688 - L1PA8 LINE L1 -1 6171 6021 1864 151 28 3 chr20 38982320 38982484 -27685521 - AluSx SINE Alu -19 293 118 216 0 0 0 chr20 38982484 38982508 -27685497 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1864 151 28 3 chr20 38982508 38982628 -27685377 - AluSx SINE Alu -194 118 2 935 221 51 97 chr20 38982628 38982823 -27685182 - L1ME3 LINE L1 -472 5698 5532 617 215 26 71 chr20 38982903 38983114 -27684891 - LTR33 LTR ERVL -3 518 315 1290 56 0 17 chr20 38983168 38983407 -27684598 + (TTTC)n Simple_repeat Simple_repeat 1 234 0 2025 131 45 0 chr20 38983409 38983699 -27684306 - AluSx SINE Alu -9 303 1 527 124 106 26 chr20 38983725 38983838 -27684167 + MLT1C LTR MaLR 1 122 -345 652 111 0 0 chr20 38983872 38983962 -27684043 - AluS SINE Alu -222 91 2 560 207 18 0 chr20 38983964 38984075 -27683930 - MER106A DNA MER1_type -121 115 3 1123 236 23 12 chr20 38984798 38985057 -27682948 + MIR SINE MIR 1 262 0 2091 118 0 33 chr20 38985113 38985419 -27682586 + AluSq SINE Alu 1 296 -17 1626 147 0 113 chr20 38985524 38985850 -27682155 - AluJo SINE Alu -23 289 1 2444 85 0 0 chr20 38985922 38986217 -27681788 - AluSx SINE Alu -17 295 1 1529 220 85 71 chr20 38987356 38987874 -27680131 + MLT1H LTR MaLR 12 536 -13 1572 217 60 78 chr20 38988002 38988550 -27679455 - MLT1F1 LTR MaLR -4 563 1 201 147 0 0 chr20 38989228 38989262 -27678743 + (TG)n Simple_repeat Simple_repeat 1 34 0 802 133 0 22 chr20 38989341 38989476 -27678529 + FLAM_C SINE Alu 2 133 0 697 342 87 42 chr20 38990398 38990557 -27677448 - MLT1K LTR MaLR -68 520 370 839 182 7 0 chr20 38990557 38990711 -27677294 - FRAM SINE Alu -11 155 1 697 342 87 42 chr20 38990711 38991033 -27676972 - MLT1K LTR MaLR -218 370 17 1477 224 74 54 chr20 38991232 38991732 -27676273 - MLT2B1 LTR ERVL -10 510 1 233 283 83 0 chr20 38992218 38992338 -27675667 + LTR33 LTR ERVL 327 456 -65 312 240 30 50 chr20 38992600 38992700 -27675305 + MIR SINE MIR 69 166 -96 364 273 36 30 chr20 38992911 38992929 -27675076 - L1MA10 LINE L1 0 6334 6317 619 276 43 19 chr20 38992929 38993139 -27674866 - L1ME1 LINE L1 -5 6161 5947 1794 174 56 0 chr20 38993202 38993489 -27674516 - AluJb SINE Alu -9 303 1 324 298 8 38 chr20 38993587 38993718 -27674287 + (CATA)n Simple_repeat Simple_repeat 2 128 0 321 259 54 60 chr20 38994594 38994779 -27673226 + L1MC/D LINE L1 4633 4816 -1330 317 352 28 28 chr20 38994810 38994989 -27673016 + L1MC/D LINE L1 4873 5051 -1095 1923 159 13 17 chr20 38995134 38995436 -27672569 + AluJo SINE Alu 1 301 -11 262 261 36 91 chr20 38995502 38995611 -27672394 + L1MC/D LINE L1 5296 5395 -2413 1323 216 109 62 chr20 38995611 38996107 -27671898 + MLT2B1 LTR ERVL 1 519 -1 262 261 36 91 chr20 38996107 38996162 -27671843 + L1MC/D LINE L1 5395 5451 -2357 1095 129 89 71 chr20 38996216 38996323 -27671682 - MER30 DNA MER1_type -1 229 125 189 0 0 0 chr20 38996323 38996344 -27671661 + (TA)n Simple_repeat Simple_repeat 2 22 0 1095 129 89 71 chr20 38996344 38996394 -27671611 - MER30 DNA MER1_type -105 125 77 2313 81 0 34 chr20 38996394 38996690 -27671315 - AluSx SINE Alu -18 294 9 1095 129 89 71 chr20 38996690 38996756 -27671249 - MER30 DNA MER1_type -153 77 1 1748 145 0 11 chr20 38997382 38997651 -27670354 - AluJo SINE Alu -12 300 35 621 314 64 65 chr20 38997775 38997973 -27670032 + L2 LINE L2 2660 2857 -456 2478 52 0 23 chr20 38997973 38998281 -27669724 - AluY SINE Alu -10 301 1 621 314 64 65 chr20 38998281 38998499 -27669506 + L2 LINE L2 2857 3074 -239 1983 125 32 35 chr20 38998499 38998875 -27669130 + THE1C LTR MaLR 1 375 0 621 314 64 65 chr20 38998875 38998922 -27669083 + L2 LINE L2 3074 3120 -193 1818 180 20 0 chr20 38998922 38999228 -27668777 - AluSx SINE Alu 0 312 1 621 314 64 65 chr20 38999228 38999374 -27668631 + L2 LINE L2 3120 3288 -25 2077 117 4 0 chr20 38999530 38999836 -27668169 - AluSx SINE Alu 0 307 1 439 250 152 37 chr20 38999866 39000030 -27667975 - MER5A DNA MER1_type -3 186 4 427 191 248 7 chr20 39000036 39000177 -27667828 - MER5B DNA MER1_type -3 175 1 226 352 0 38 chr20 39000577 39000682 -27667323 - MER5B DNA MER1_type -77 101 1 204 300 62 0 chr20 39000898 39000978 -27667027 + MIR SINE MIR 108 192 -70 1028 178 48 10 chr20 39001242 39001450 -27666555 - MER20 DNA MER1_type 0 219 4 249 215 0 122 chr20 39001488 39001595 -27666410 - MIR SINE MIR 0 262 169 2139 121 30 0 chr20 39001618 39001915 -27666090 + AluSx SINE Alu 1 306 -6 1381 176 77 0 chr20 39002012 39002285 -27665720 - MLT1D LTR MaLR 0 505 212 205 321 24 0 chr20 39002367 39002451 -27665554 + L3 LINE CR1 1341 1426 -151 * 269 291 48 44 chr20 39002442 39002693 -27665312 - L2 LINE L2 -2505 809 558 506 171 198 0 chr20 39002693 39002804 -27665201 + MER45 DNA AcHobo 3 135 -818 944 246 161 22 chr20 39002923 39003333 -27664672 - LTR33 LTR ERVL -33 488 22 956 251 121 72 chr20 39004127 39004393 -27663612 + L2 LINE L2 2686 2938 -375 2106 134 0 0 chr20 39004393 39004683 -27663322 - AluSx SINE Alu -20 292 3 956 251 121 72 chr20 39004683 39005018 -27662987 + L2 LINE L2 2938 3313 0 320 283 113 0 chr20 39005022 39005145 -27662860 + MIR SINE MIR 50 149 -59 1821 174 16 7 chr20 39005901 39006206 -27661799 - AluSx SINE Alu -4 308 1 1564 178 45 65 chr20 39006296 39006678 -27661327 + MLT1A2 LTR MaLR 1 374 0 409 244 17 96 chr20 39006928 39007158 -27660847 + L1MC4a LINE L1 5718 5929 -1879 1153 203 42 89 chr20 39007186 39007317 -27660688 + MER2 DNA MER2_type 2 138 -206 2378 96 3 3 chr20 39007317 39007620 -27660385 - AluSx SINE Alu -9 303 1 1153 203 42 89 chr20 39007620 39007848 -27660157 + MER2 DNA MER2_type 138 344 0 262 322 141 34 chr20 39008394 39008543 -27659462 + MIR SINE MIR 77 241 -21 341 236 135 0 chr20 39008594 39008683 -27659322 + MIR SINE MIR 73 173 -89 428 295 54 30 chr20 39008684 39008850 -27659155 - L2 LINE L2 0 3313 3144 1652 207 3 7 chr20 39009189 39009494 -27658511 - AluJo SINE Alu -8 304 1 22 0 0 0 chr20 39009536 39009558 -27658447 + AT_rich Low_complexity Low_complexity 1 22 0 499 293 149 0 chr20 39009626 39009827 -27658178 - MIR SINE MIR -3 259 29 289 284 49 0 chr20 39010068 39010149 -27657856 + MER91B DNA MER1_type 2 86 -54 250 170 19 19 chr20 39011606 39011659 -27656346 + CT-rich Low_complexity Low_complexity 2 54 0 551 301 21 27 chr20 39012330 39012516 -27655489 + MIR SINE MIR 8 192 -70 330 342 40 30 chr20 39012669 39012868 -27655137 - L2 LINE L2 -192 3080 2880 2206 114 7 0 chr20 39013520 39013817 -27654188 + AluSx SINE Alu 1 299 -13 2021 169 36 11 chr20 39013850 39014206 -27653799 + MLT1A1 LTR MaLR 1 365 0 1730 134 25 147 chr20 39014572 39014907 -27653098 - MLT1B LTR MaLR 0 390 16 2113 123 0 40 chr20 39014907 39015231 -27652774 - AluSx SINE Alu 0 312 2 246 32 0 0 chr20 39015231 39015262 -27652743 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1882 134 22 0 chr20 39015263 39015539 -27652466 - AluJo SINE Alu -30 282 1 1730 134 25 147 chr20 39015539 39015641 -27652364 - MLT1B LTR MaLR -372 18 4 363 307 20 0 chr20 39015681 39015782 -27652223 - MIR SINE MIR -66 142 40 207 88 0 0 chr20 39016467 39016501 -27651504 + (TC)n Simple_repeat Simple_repeat 1 34 0 351 0 0 0 chr20 39016501 39016540 -27651465 + (TG)n Simple_repeat Simple_repeat 2 40 0 180 62 42 42 chr20 39016956 39017004 -27651001 + (GGGA)n Simple_repeat Simple_repeat 3 50 0 335 217 132 9 chr20 39017068 39017174 -27650831 + L2 LINE L2 3188 3306 -7 532 290 11 23 chr20 39017222 39017398 -27650607 - MIR SINE MIR -75 187 14 1938 157 10 3 chr20 39017533 39017838 -27650167 + AluJb SINE Alu 1 307 -5 647 150 39 31 chr20 39017873 39018000 -27650005 + FRAM SINE Alu 41 168 -8 186 333 0 0 chr20 39018159 39018210 -27649795 - L2 LINE L2 0 3313 3263 * 199 296 56 0 chr20 39018201 39018255 -27649750 + MIR SINE MIR 90 146 -62 451 194 94 9 chr20 39018951 39019068 -27648937 + MER33 DNA MER1_type 1 120 -103 587 325 15 10 chr20 39019795 39019992 -27648013 - MIR SINE MIR -36 226 29 216 311 0 25 chr20 39020020 39020139 -27647866 + (CATATA)n Simple_repeat Simple_repeat 3 118 0 * 227 293 5 53 chr20 39020067 39020303 -27647702 + (CATA)n Simple_repeat Simple_repeat 1 224 0 243 0 0 0 chr20 39020411 39020438 -27647567 + (CA)n Simple_repeat Simple_repeat 2 28 0 210 267 233 0 chr20 39021748 39021838 -27646167 + MIR SINE MIR 12 122 -140 239 289 134 45 chr20 39021979 39022180 -27645825 + L2 LINE L2 2911 3129 -143 583 198 0 24 chr20 39023196 39023446 -27644559 + (ATGGTG)n Simple_repeat Simple_repeat 1 244 0 299 338 205 5 chr20 39023482 39023563 -27644442 - MIR SINE MIR -1 261 197 1268 225 152 46 chr20 39023563 39024016 -27643989 - MLT1D LTR MaLR 0 505 5 299 338 205 5 chr20 39024016 39024144 -27643861 - MIR SINE MIR -64 198 10 235 371 57 0 chr20 39025396 39025501 -27642504 + MER91C DNA MER1_type 1 111 -29 930 262 120 40 chr20 39025683 39026107 -27641898 - L2 LINE L2 -1 3312 2855 847 257 158 20 chr20 39026361 39026754 -27641251 - MLT1J2 LTR MaLR -3 447 1 464 264 125 14 chr20 39026803 39026947 -27641058 + MER5B DNA MER1_type 17 176 -2 299 341 106 6 chr20 39027879 39028049 -27639956 - MER117 DNA MER1_type 0 197 11 287 242 135 59 chr20 39028676 39028895 -27639110 + MIR SINE MIR 19 262 0 524 209 0 35 chr20 39029959 39030131 -27637874 + CT-rich Low_complexity Low_complexity 4 169 0 301 261 38 9 chr20 39030195 39030409 -27637596 + CT-rich Low_complexity Low_complexity 1 220 0 285 336 87 54 chr20 39030410 39030708 -27637297 - L2 LINE L2 -31 3241 2934 244 272 147 60 chr20 39030741 39030925 -27637080 + MIR SINE MIR 32 231 -31 * 570 328 47 0 chr20 39030903 39031095 -27636910 - MIR SINE MIR -51 211 11 577 199 13 26 chr20 39031316 39031634 -27636371 + GA-rich Low_complexity Low_complexity 1 313 0 242 203 34 0 chr20 39032740 39032799 -27635206 + (TAA)n Simple_repeat Simple_repeat 3 63 0 327 134 183 0 chr20 39033929 39034011 -27633994 - L1MA8 LINE L1 -1 6290 6194 2250 111 0 10 chr20 39034560 39034857 -27633148 + AluSg SINE Alu 1 294 -16 199 246 112 79 chr20 39035123 39035304 -27632701 + MER5B DNA MER1_type 6 175 -3 445 206 10 10 chr20 39035315 39035412 -27632593 + MER96 DNA MER1_type? 77 173 -2 268 321 201 14 chr20 39035610 39035819 -27632186 - MIR SINE MIR -13 249 2 512 298 185 18 chr20 39035960 39036360 -27631645 + MLT1K LTR MaLR 122 588 0 3961 158 17 39 chr20 39036563 39037312 -27630693 - L1MB3 LINE L1 -7 6176 5444 1586 229 163 29 chr20 39037338 39037822 -27630183 - MLT1H LTR MaLR 0 549 1 260 191 138 30 chr20 39038486 39038594 -27629411 - MLT1I LTR MaLR -13 554 285 1131 203 5 0 chr20 39039897 39040104 -27627901 + MER58A DNA MER1_type 9 216 -8 378 317 104 43 chr20 39040138 39040368 -27627637 - L2 LINE L2 -129 3143 2900 432 200 30 0 chr20 39040961 39041061 -27626944 - MER117 DNA MER1_type -34 163 61 222 222 283 20 chr20 39041205 39041304 -27626701 - L2 LINE L2 -8 3305 3181 342 0 0 0 chr20 39042151 39042189 -27625816 + (CA)n Simple_repeat Simple_repeat 2 39 0 204 40 0 0 chr20 39042568 39042593 -27625412 + (TAAA)n Simple_repeat Simple_repeat 3 27 0 437 225 212 13 chr20 39043109 39043260 -27624745 - MER5A DNA MER1_type 0 189 9 255 200 100 0 chr20 39045065 39045130 -27622875 + LTR16C LTR ERVL 149 220 -271 1759 206 79 63 chr20 39045130 39045621 -27622384 - MLT1D LTR MaLR 0 505 7 1072 227 29 26 chr20 39045633 39045906 -27622099 + LTR16C LTR ERVL 216 489 -2 7871 175 16 21 chr20 39046333 39047826 -27620179 - L1M1 LINE L1 -6058 1507 23 353 224 318 0 chr20 39049496 39049603 -27618402 - MIR SINE MIR -86 176 36 224 286 12 36 chr20 39049749 39049833 -27618172 - MIR3 SINE MIR -122 86 5 223 372 21 11 chr20 39049863 39049957 -27618048 - MIR SINE MIR -97 111 17 246 32 0 0 chr20 39050329 39050360 -27617645 + (CA)n Simple_repeat Simple_repeat 1 31 0 204 67 0 0 chr20 39050360 39050390 -27617615 + (TC)n Simple_repeat Simple_repeat 1 30 0 556 334 38 52 chr20 39051382 39051802 -27616203 + L2 LINE L2 2670 3081 -191 201 298 35 0 chr20 39051993 39052050 -27615955 - L2 LINE L2 -1 3271 3213 * 738 217 16 112 chr20 39052026 39052275 -27615730 + MIR SINE MIR 32 256 -6 306 0 0 0 chr20 39052277 39052311 -27615694 + (TAA)n Simple_repeat Simple_repeat 2 35 0 24 0 0 0 chr20 39052352 39052376 -27615629 + AT_rich Low_complexity Low_complexity 1 24 0 336 297 0 0 chr20 39052773 39052864 -27615141 + L2 LINE L2 3177 3267 -5 1265 126 17 65 chr20 39053689 39053919 -27614086 + MER20 DNA MER1_type 1 219 0 200 248 18 18 chr20 39053963 39054072 -27613933 + CT-rich Low_complexity Low_complexity 2 110 0 726 285 127 29 chr20 39054072 39054419 -27613586 - L2 LINE L2 -76 3237 2857 2337 83 0 0 chr20 39054875 39055163 -27612842 - AluSg SINE Alu -10 300 13 617 197 161 0 chr20 39055307 39055444 -27612561 + MLT1C LTR MaLR 309 467 0 411 73 0 0 chr20 39055616 39055671 -27612334 + (TG)n Simple_repeat Simple_repeat 2 56 0 366 156 0 0 chr20 39056068 39056132 -27611873 + (TG)n Simple_repeat Simple_repeat 2 65 0 468 277 26 19 chr20 39057909 39058064 -27609941 - MER91A DNA MER1_type -40 156 1 533 292 52 36 chr20 39058066 39058316 -27609689 - MIR SINE MIR -2 260 7 807 269 178 7 chr20 39058504 39058802 -27609203 + LTR16C LTR ERVL 142 490 -1 2158 120 3 0 chr20 39059274 39059574 -27608431 - AluSc SINE Alu -8 301 1 243 253 27 13 chr20 39059579 39059654 -27608351 + MIR SINE MIR 47 122 -86 421 264 23 23 chr20 39060339 39060468 -27607537 - MLT1L LTR MaLR -10 605 477 1705 158 27 34 chr20 39060526 39060824 -27607181 - AluSx SINE Alu -15 297 2 361 212 84 67 chr20 39061354 39061391 -27606614 + MIR SINE MIR 13 48 -214 1122 248 118 22 chr20 39061391 39061798 -27606207 - MLT1J1 LTR MaLR 0 446 1 361 212 84 67 chr20 39061798 39061939 -27606066 + MIR SINE MIR 48 194 -68 305 359 8 8 chr20 39062036 39062167 -27605838 + L2 LINE L2 3183 3313 0 227 182 23 0 chr20 39062265 39062309 -27605696 + G-rich Low_complexity Low_complexity 3 47 0 327 219 76 19 chr20 39062703 39062808 -27605197 - MER5B DNA MER1_type -67 111 1 370 180 0 0 chr20 39063143 39063204 -27604801 + MADE1 DNA Mariner 1 61 -19 7753 20 9 0 chr20 39063215 39064107 -27603898 + L1PA2 LINE L1 5254 6153 -2 2348 110 0 0 chr20 39064238 39064546 -27603459 + AluY SINE Alu 1 308 -3 475 294 82 11 chr20 39064862 39065046 -27602959 + MER117 DNA MER1_type 1 197 0 261 348 26 17 chr20 39065054 39065169 -27602836 + L2 LINE L2 3157 3272 0 305 331 11 33 chr20 39065345 39065454 -27602551 + MIR SINE MIR 46 151 -111 445 56 127 28 chr20 39065454 39065525 -27602480 - MADE1 DNA Mariner 0 80 3 305 331 11 33 chr20 39065525 39065596 -27602409 + MIR SINE MIR 151 222 -40 192 400 0 0 chr20 39066062 39066152 -27601853 + MER5A DNA MER1_type 46 135 -54 292 267 144 0 chr20 39066327 39066417 -27601588 + MER5B DNA MER1_type 73 175 -3 207 300 0 0 chr20 39066903 39066953 -27601052 - L3 LINE CR1 -137 1440 1391 387 263 117 42 chr20 39067027 39067240 -27600765 + L2 LINE L2 3010 3238 -75 340 221 52 0 chr20 39067250 39067327 -27600678 - LTR33 LTR ERVL -10 511 431 1870 166 0 13 chr20 39067328 39067630 -27600375 + AluJb SINE Alu 1 298 -14 362 333 22 7 chr20 39067852 39067990 -27600015 - LTR33 LTR ERVL -376 145 6 351 263 0 0 chr20 39067992 39068072 -27599933 + L2 LINE L2 3234 3313 0 337 300 214 26 chr20 39068080 39068393 -27599612 - L3 LINE CR1 -319 1258 887 571 213 88 7 chr20 39068507 39068643 -27599362 - MER117 DNA MER1_type -50 147 1 193 321 25 0 chr20 39068744 39068825 -27599180 + MIR SINE MIR 161 243 -19 1529 169 12 43 chr20 39069377 39069702 -27598303 - MER33 DNA MER1_type -9 315 1 1828 179 0 10 chr20 39069849 39070150 -27597855 - AluJb SINE Alu -14 298 1 196 229 21 0 chr20 39070212 39070260 -27597745 + L2 LINE L2 3224 3272 0 389 243 39 19 chr20 39071379 39071482 -27596523 - MER91C DNA MER1_type -35 105 1 548 225 56 44 chr20 39071670 39071830 -27596175 + MER58B DNA MER1_type 180 341 0 189 0 0 0 chr20 39072068 39072089 -27595916 + (TG)n Simple_repeat Simple_repeat 1 21 0 250 364 98 40 chr20 39072112 39072409 -27595596 - L2 LINE L2 -4 3268 2955 611 295 86 33 chr20 39073512 39073932 -27594073 + L1MC/D LINE L1 5257 5698 -423 2415 129 22 67 chr20 39073938 39074389 -27593616 - Tigger7 DNA MER2_type -1 2486 2056 345 179 90 15 chr20 39074389 39074456 -27593549 - Tigger7 DNA MER2_type -661 72 1 250 222 40 91 chr20 39074458 39074557 -27593448 + L1MC/D LINE L1 5688 5781 -2027 923 172 0 54 chr20 39075400 39075586 -27592419 - FRAM SINE Alu -8 168 1 24 0 0 0 chr20 39076304 39076328 -27591677 + AT_rich Low_complexity Low_complexity 1 24 0 334 279 15 37 chr20 39077895 39078031 -27589974 - L3 LINE CR1 -697 880 748 1735 201 10 0 chr20 39078147 39078455 -27589550 - AluJo SINE Alu -1 311 1 1531 196 4 0 chr20 39078460 39078740 -27589265 - AluJb SINE Alu -12 300 20 760 272 81 42 chr20 39078742 39079099 -27588906 + L2 LINE L2 2939 3309 -4 223 250 0 0 chr20 39079462 39079518 -27588487 - L2 LINE L2 -16 3256 3201 818 308 108 17 chr20 39079722 39080543 -27587462 - L2 LINE L2 -2 3311 2409 4904 163 54 28 chr20 39080755 39081834 -27586171 - L1 LINE L1 -1903 4243 3137 3198 173 18 14 chr20 39081833 39081854 -27586151 + L1 LINE L1 3994 4013 -2133 * 2549 117 11 13 chr20 39081854 39082230 -27585775 + THE1C LTR MaLR 1 375 0 3198 173 18 14 chr20 39082230 39082832 -27585173 + L1 LINE L1 4013 4619 -1527 246 116 0 0 chr20 39082832 39082875 -27585130 + (T)n Simple_repeat Simple_repeat 1 43 0 196 248 93 54 chr20 39082957 39083086 -27584919 + MIR3 SINE MIR 3 136 -72 181 286 0 0 chr20 39083670 39083719 -27584286 + L2 LINE L2 3227 3275 -38 191 176 0 78 chr20 39083788 39083839 -27584166 - MIR SINE MIR -58 204 158 465 227 99 6 chr20 39083841 39084024 -27583981 + MER58 DNA MER1_type 3 2420 0 445 288 35 77 chr20 39084031 39084052 -27583953 - MLT1I LTR MaLR -1 408 388 2404 167 33 17 chr20 39084052 39084471 -27583534 + MSTB LTR MaLR 1 426 0 445 288 35 77 chr20 39084471 39084808 -27583197 - MLT1I LTR MaLR -21 388 89 351 276 16 16 chr20 39084826 39084949 -27583056 - MIR SINE MIR -128 134 12 394 263 194 74 chr20 39085627 39085844 -27582161 + MIR SINE MIR 13 255 -7 21 36 0 0 chr20 39085847 39085875 -27582130 + AT_rich Low_complexity Low_complexity 1 28 0 680 246 92 71 chr20 39086323 39086700 -27581305 + MLT1F LTR MaLR 197 590 0 919 205 111 35 chr20 39087025 39087313 -27580692 - MER5C DNA MER1_type 0 324 15 234 0 0 0 chr20 39087401 39087427 -27580578 + (T)n Simple_repeat Simple_repeat 1 26 0 744 283 116 45 chr20 39088051 39088405 -27579600 + MLT1K LTR MaLR 210 588 0 701 279 26 5 chr20 39088414 39088604 -27579401 - MER117 DNA MER1_type 0 197 4 305 333 115 23 chr20 39089064 39089454 -27578551 + L2 LINE L2 2655 3080 -192 640 201 21 7 chr20 39089479 39089623 -27578382 - MIR SINE MIR -3 259 114 391 278 26 9 chr20 39089696 39089811 -27578194 + L2 LINE L2 3182 3298 -15 2107 131 58 17 chr20 39090004 39090364 -27577641 + THE1C LTR MaLR 1 375 0 199 135 0 39 chr20 39090629 39090681 -27577324 + (TG)n Simple_repeat Simple_repeat 1 50 0 248 146 36 55 chr20 39091455 39091510 -27576495 + MIR SINE MIR 54 107 -155 1134 295 41 8 chr20 39091635 39092022 -27575983 + MLT1I LTR MaLR 1 400 -9 1391 260 93 49 chr20 39092429 39092518 -27575487 - L1ME4a LINE L1 -3 6118 6034 1717 160 7 17 chr20 39092518 39092811 -27575194 + AluJb SINE Alu 1 290 -22 1391 260 93 49 chr20 39092811 39093459 -27574546 - L1ME4a LINE L1 -87 6034 5348 476 214 54 0 chr20 39093508 39093620 -27574385 - L2 LINE L2 0 3313 3196 995 207 31 18 chr20 39093732 39093954 -27574051 - MER96B DNA MER1_type? -191 226 2 977 276 96 32 chr20 39094431 39094869 -27573136 - LTR33A LTR ERVL -51 472 7 187 254 0 51 chr20 39095598 39095657 -27572348 + L2 LINE L2 1177 1232 -2082 684 167 215 0 chr20 39096684 39096828 -27571177 + MER96 DNA MER1_type 1 175 0 289 378 8 0 chr20 39097072 39097191 -27570814 + MIR SINE MIR 10 129 -133 724 295 91 9 chr20 39097240 39097569 -27570436 + L2 LINE L2 2958 3313 0 208 307 13 13 chr20 39097658 39097733 -27570272 - MIR SINE MIR -139 123 49 889 199 31 66 chr20 39097954 39098210 -27569795 + MLT1D LTR MaLR 1 247 -258 1676 278 54 15 chr20 39098234 39098672 -27569333 - L2 LINE L2 -237 3076 2605 2027 164 27 27 chr20 39098672 39099037 -27568968 - MLT1A1 LTR MaLR 0 365 1 1676 278 54 15 chr20 39099037 39099292 -27568713 - L2 LINE L2 -708 2605 2361 4845 175 54 28 chr20 39099480 39100616 -27567389 + L1MA10 LINE L1 4980 6155 -179 375 89 0 0 chr20 39100616 39100672 -27567333 + (CA)n Simple_repeat Simple_repeat 2 57 0 4845 175 54 28 chr20 39100672 39100854 -27567151 + L1MA10 LINE L1 6155 6331 -3 252 259 0 0 chr20 39101355 39101413 -27566592 - LTR16B LTR ERVL 0 464 407 1496 181 18 93 chr20 39101424 39101811 -27566194 + MLT2D LTR ERVL 1 358 -56 41 21 0 0 chr20 39101811 39101859 -27566146 + AT_rich Low_complexity Low_complexity 1 48 0 7858 24 1 0 chr20 39102001 39103582 -27564423 - L1PA4 LINE L1 0 6155 4575 2377 212 85 80 chr20 39104120 39104870 -27563135 - MER21B LTR ERV1 -85 778 25 251 339 40 20 chr20 39104935 39105183 -27562822 + L1M4 LINE L1 4033 4285 -1861 270 0 0 0 chr20 39105202 39105232 -27562773 + (CA)n Simple_repeat Simple_repeat 1 30 0 268 267 0 57 chr20 39105441 39105546 -27562459 + LTR67 LTR ERVL 456 554 -3 2578 149 14 19 chr20 39106921 39107349 -27560656 + MSTB LTR MaLR 1 426 0 257 360 208 0 chr20 39107777 39108013 -27559992 + L3 LINE CR1 111 395 -1182 652 301 96 42 chr20 39108035 39108420 -27559585 - MLT1J LTR MaLR -2 509 104 606 350 66 30 chr20 39108508 39109065 -27558940 + L3 LINE CR1 430 1006 -571 312 298 113 30 chr20 39109267 39109435 -27558570 + L3 LINE CR1 1393 1574 -3 390 300 119 48 chr20 39109875 39110462 -27557543 - L2 LINE L2 -15 3257 2628 312 210 3 15 chr20 39110801 39110885 -27557120 - MIR SINE MIR -112 96 12 1000 207 5 0 chr20 39111737 39111925 -27556080 - MER5A DNA MER1_type 0 189 1 2743 209 52 54 chr20 39113116 39113201 -27554804 - MER44D DNA MER2_type -1890 597 513 2397 107 0 0 chr20 39113201 39113511 -27554494 - AluSg SINE Alu 0 310 1 2743 209 52 54 chr20 39113511 39114060 -27553945 - MER44D DNA MER2_type -1974 513 90 4763 86 16 2 chr20 39114060 39114688 -27553317 - L1PA11 LINE L1 -15 6159 5523 2743 209 52 54 chr20 39114688 39114778 -27553227 - MER44D DNA MER2_type -2397 90 1 228 255 20 0 chr20 39115831 39115882 -27552123 + L3 LINE CR1 1421 1472 -105 1464 266 83 33 chr20 39116027 39116543 -27551462 - MLT1F LTR MaLR 0 542 1 435 302 15 63 chr20 39116796 39117001 -27551004 + L2 LINE L2 2865 3059 -213 1419 243 81 70 chr20 39117001 39117585 -27550420 + MLT1G1 LTR MaLR 1 590 -5 262 298 68 58 chr20 39117643 39117834 -27550171 + L2 LINE L2 3118 3310 -3 186 362 129 25 chr20 39117925 39118290 -27549715 + L2 LINE L2 2394 2796 -518 670 266 153 65 chr20 39118690 39119120 -27548885 - MLT1G LTR MaLR -57 498 35 351 307 75 96 chr20 39119411 39119756 -27548249 + L2 LINE L2 2935 3272 0 505 303 72 11 chr20 39120235 39120467 -27547538 - MIR SINE MIR -12 250 5 774 262 69 83 chr20 39120600 39121081 -27546924 - LTR16C LTR ERVL -17 474 1 212 321 0 0 chr20 39121719 39121775 -27546230 - L2 LINE L2 -1 3312 3257 441 308 77 16 chr20 39122028 39122210 -27545795 + MLT1-int LTR MaLR 692 884 -487 687 275 26 16 chr20 39122602 39122791 -27545214 - MIR SINE MIR -67 195 5 451 163 81 0 chr20 39122796 39122882 -27545123 + MER103 DNA DNA 66 158 -8 562 303 49 67 chr20 39123020 39123304 -27544701 - MLT1I LTR MaLR -33 376 98 370 133 67 0 chr20 39124349 39124409 -27543596 - MLT1D-int LTR MaLR -1307 64 1 2112 203 29 46 chr20 39124417 39124899 -27543106 - MLT1D LTR MaLR -31 474 1 700 138 191 0 chr20 39125234 39125386 -27542619 + MER96B DNA MER1_type? 236 416 -1 1591 128 3 125 chr20 39125630 39125965 -27542040 - AluSg1 SINE Alu -15 294 1 651 268 48 17 chr20 39126096 39126327 -27541678 - MIR SINE MIR -11 251 14 456 288 0 8 chr20 39126757 39126889 -27541116 - MLT1K LTR MaLR 0 588 458 814 214 17 17 chr20 39126921 39127094 -27540911 + MLT2F LTR ERVL 1 173 -490 2284 109 0 10 chr20 39128116 39128420 -27539585 - AluSx SINE Alu -9 303 3 1111 209 25 17 chr20 39128438 39128673 -27539332 - MER92B LTR ERV1 -399 237 1 1022 249 50 79 chr20 39128686 39129127 -27538878 + LTR16A1 LTR ERVL 30 457 0 600 268 161 0 chr20 39130030 39130237 -27537768 - MIR SINE MIR -10 252 13 2295 174 5 3 chr20 39130973 39131352 -27536653 + MLT1B LTR MaLR 1 380 -10 814 279 23 49 chr20 39131565 39131912 -27536093 - L2 LINE L2 -544 2770 2433 1316 178 40 44 chr20 39132185 39132460 -27535545 - AluJo SINE Alu -38 274 1 1744 126 0 69 chr20 39132461 39132778 -27535227 - L1MB5 LINE L1 -295 5879 5585 400 316 30 43 chr20 39132842 39133073 -27534932 + L2 LINE L2 2200 2427 -887 270 290 112 9 chr20 39133121 39133228 -27534777 + MIR SINE MIR 75 192 -70 271 365 0 9 chr20 39133433 39133540 -27534465 + MER5A DNA MER1_type 84 189 0 324 247 22 0 chr20 39133986 39134075 -27533930 + MER103 DNA DNA 35 125 -41 188 278 165 9 chr20 39134493 39134608 -27533397 + L2 LINE L2 3127 3259 -13 227 364 18 0 chr20 39135347 39135457 -27532548 - L2 LINE L2 -21 3251 3140 * 306 286 34 8 chr20 39135456 39135575 -27532430 + MIR SINE MIR 111 232 -30 470 304 0 63 chr20 39136052 39136243 -27531762 + C-rich Low_complexity Low_complexity 1 179 0 487 305 73 26 chr20 39136737 39137039 -27530966 + HsTC2 DNA Tc2 562 877 -1021 306 318 68 16 chr20 39137135 39137327 -27530678 - L1M4 LINE L1 -1821 4325 4124 21 0 0 0 chr20 39137352 39137373 -27530632 + AT_rich Low_complexity Low_complexity 1 21 0 355 270 40 27 chr20 39137676 39137824 -27530181 - L1ME4a LINE L1 -92 6029 5880 1212 266 77 19 chr20 39137834 39138279 -27529726 - L1ME4a LINE L1 -293 5828 5359 1079 154 12 0 chr20 39138279 39138441 -27529564 - FAM SINE Alu -10 165 2 1212 266 77 19 chr20 39138441 39138530 -27529475 - L1ME4a LINE L1 -762 5359 5277 226 355 65 0 chr20 39139082 39139189 -27528816 - MIR SINE MIR -59 203 90 246 200 15 31 chr20 39139855 39139920 -27528085 + CT-rich Low_complexity Low_complexity 2 65 0 566 268 75 115 chr20 39140853 39141331 -27526674 - LTR16C LTR ERVL -32 459 1 1172 203 33 0 chr20 39142753 39142965 -27525040 - MER20 DNA MER1_type 0 219 1 260 169 17 34 chr20 39143102 39143161 -27524844 - MLT1I LTR MaLR 0 450 347 763 248 3 14 chr20 39144600 39144827 -27523178 + MIR SINE MIR 39 260 -2 316 289 21 0 chr20 39145053 39145150 -27522855 - MIR SINE MIR -59 203 105 377 188 35 0 chr20 39145842 39145927 -27522078 - L2 LINE L2 0 3272 3185 243 274 103 8 chr20 39145923 39146040 -27521965 - MIR SINE MIR -126 136 9 * 422 211 301 0 chr20 39146685 39146818 -27521187 - MER5A DNA MER1_type -6 183 11 678 199 35 0 chr20 39146893 39147034 -27520971 + MER103 DNA DNA 5 150 -16 626 312 46 4 chr20 39148009 39148246 -27519759 - MIR SINE MIR 0 262 16 2205 117 0 16 chr20 39148437 39148753 -27519252 - AluY SINE Alu 0 311 1 433 230 111 0 chr20 39150011 39150137 -27517868 + MER91C DNA MER1_type 1 140 0 807 120 0 0 chr20 39150400 39150517 -27517488 - AluSg/x SINE Alu -3 307 191 338 358 24 0 chr20 39150718 39150883 -27517122 + MIR SINE MIR 52 220 -42 552 297 4 43 chr20 39151083 39151315 -27516690 - L2 LINE L2 -240 3073 2851 588 96 4 3 chr20 39151479 39151710 -27516295 + AluSc SINE Alu 1 300 -9 612 197 164 81 chr20 39151715 39152025 -27515980 - MLT1L LTR MaLR -17 598 263 2414 77 3 0 chr20 39152825 39153122 -27514883 + AluSx SINE Alu 1 298 -14 212 98 0 24 chr20 39155036 39155077 -27512928 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 228 254 16 0 chr20 39155128 39155191 -27512814 + MIR SINE MIR 199 262 0 1576 223 59 19 chr20 39155573 39155945 -27512060 + MLT1G1 LTR MaLR 1 387 -208 847 209 7 0 chr20 39155961 39156109 -27511896 - MER58B DNA MER1_type -3 338 190 249 246 16 0 chr20 39156138 39156199 -27511806 + MLT1G1 LTR MaLR 395 456 -139 284 297 109 64 chr20 39156413 39156619 -27511386 - MIR SINE MIR -27 235 25 2023 173 99 18 chr20 39156753 39157147 -27510858 + MSTB LTR MaLR 1 426 0 772 314 81 8 chr20 39157363 39157745 -27510260 + LTR16C LTR ERVL 74 483 -8 2344 73 0 3 chr20 39157850 39158151 -27509854 + AluY SINE Alu 1 300 -11 252 308 135 16 chr20 39158586 39158771 -27509234 - L1MEd LINE L1 -5448 671 465 282 143 0 0 chr20 39159523 39159572 -27508433 + (CCCA)n Simple_repeat Simple_repeat 4 52 0 345 314 13 59 chr20 39160025 39160178 -27507827 - MLT1J2 LTR MaLR -37 413 268 1854 192 87 38 chr20 39160182 39160677 -27507328 + L1ME1 LINE L1 2617 3143 -3003 2146 105 3 0 chr20 39160677 39160973 -27507032 + AluSx SINE Alu 1 297 -15 1854 192 87 38 chr20 39160973 39161029 -27506976 + L1ME1 LINE L1 3143 3195 -2951 709 230 25 29 chr20 39160997 39161201 -27506804 + L1ME1 LINE L1 3426 3628 -2518 * 4217 225 40 40 chr20 39161200 39163276 -27504729 + L1ME1 LINE L1 4083 6161 -5 437 309 23 23 chr20 39163277 39163452 -27504553 - L2 LINE L2 -608 2706 2532 253 305 11 42 chr20 39163514 39163609 -27504396 - MIR SINE MIR -88 120 28 357 204 226 0 chr20 39164001 39164094 -27503911 - MER81 DNA DNA 0 114 1 293 0 27 0 chr20 39164122 39164159 -27503846 + (TG)n Simple_repeat Simple_repeat 1 38 0 520 248 15 15 chr20 39164360 39164497 -27503508 + MIR SINE MIR 13 149 -113 219 299 0 0 chr20 39164632 39164802 -27503203 + (TG)n Simple_repeat Simple_repeat 1 170 0 250 236 42 42 chr20 39166059 39166131 -27501874 + L2 LINE L2 3235 3306 -7 241 313 15 0 chr20 39166141 39166208 -27501797 - MIR SINE MIR -116 146 79 266 302 47 9 chr20 39166642 39166748 -27501257 - MIR SINE MIR -104 158 49 * 844 280 86 52 chr20 39166744 39167187 -27500818 + L2 LINE L2 2847 3304 -9 402 305 16 23 chr20 39167188 39167316 -27500689 - MIR SINE MIR -116 146 20 242 284 45 0 chr20 39167476 39167564 -27500441 + MIR SINE MIR 39 130 -78 724 237 69 25 chr20 39168790 39169009 -27498996 + MIR SINE MIR 36 262 0 316 250 162 41 chr20 39169097 39169290 -27498715 - MIR SINE MIR -30 232 15 589 265 66 29 chr20 39169818 39170054 -27497951 + MIR SINE MIR 20 259 -3 296 296 65 24 chr20 39170075 39170276 -27497729 - MIR SINE MIR -21 241 32 250 279 49 0 chr20 39170375 39170436 -27497569 - L2 LINE L2 -4 3309 3246 226 365 94 5 chr20 39170636 39170839 -27497166 + MIR SINE MIR 41 261 -1 231 361 12 0 chr20 39170892 39170975 -27497030 + L3 LINE CR1 573 656 -921 2247 87 0 7 chr20 39171145 39171444 -27496561 - AluSg SINE Alu -13 297 1 249 378 45 20 chr20 39171481 39171682 -27496323 + L3 LINE CR1 661 866 -711 1045 209 42 0 chr20 39171738 39171953 -27496052 - MER58A DNA MER1_type 0 224 1 326 321 37 15 chr20 39172165 39172299 -27495706 - MIR SINE MIR -52 210 74 417 260 112 35 chr20 39172304 39172473 -27495532 - L2 LINE L2 -3 3310 3129 824 233 70 0 chr20 39172502 39172674 -27495331 + MER58A DNA MER1_type 1 184 -40 550 279 165 30 chr20 39172688 39172985 -27495020 - MLT1I LTR MaLR -68 341 5 188 323 0 15 chr20 39173085 39173150 -27494855 - MIR SINE MIR -196 66 3 2260 101 3 0 chr20 39173740 39174047 -27493958 - AluSx SINE Alu -4 308 1 251 114 23 0 chr20 39174195 39174239 -27493766 + CT-rich Low_complexity Low_complexity 2 46 0 653 276 41 0 chr20 39174365 39174535 -27493470 - MIR SINE MIR -70 192 16 2034 177 0 49 chr20 39174714 39175007 -27492998 - MLT1B LTR MaLR 0 390 121 1529 139 56 38 chr20 39175007 39175295 -27492710 - AluJb SINE Alu -19 293 1 2034 177 0 49 chr20 39175295 39175407 -27492598 - MLT1B LTR MaLR -269 121 5 201 213 0 0 chr20 39175818 39175865 -27492140 + CT-rich Low_complexity Low_complexity 4 50 0 230 349 0 0 chr20 39175901 39175967 -27492038 - L2 LINE L2 -15 3257 3192 306 248 133 53 chr20 39176165 39176479 -27491526 - L2 LINE L2 -218 3054 2723 694 211 91 0 chr20 39176712 39176887 -27491118 - L1MD3 LINE L1 -15 7980 7790 1276 170 90 48 chr20 39176908 39177197 -27490808 - AluSq SINE Alu -1 302 2 2016 135 0 6 chr20 39177208 39177520 -27490485 - AluSq SINE Alu -3 310 1 476 303 216 9 chr20 39178114 39178434 -27489571 + L2 LINE L2 2926 3311 -2 231 88 0 0 chr20 39178468 39178502 -27489503 + (TAA)n Simple_repeat Simple_repeat 2 35 0 253 269 21 54 chr20 39178644 39178737 -27489268 + L2 LINE L2 3183 3272 0 199 220 140 80 chr20 39179515 39179615 -27488390 + MER5A DNA MER1_type 58 163 -26 528 316 93 63 chr20 39180000 39180551 -27487454 + L2 LINE L2 1242 1808 -1506 758 208 7 7 chr20 39180610 39180754 -27487251 - FAM SINE Alu -19 166 23 429 258 152 0 chr20 39180757 39180908 -27487097 - MIR SINE MIR -58 204 31 608 335 173 24 chr20 39180967 39181456 -27486549 + L2 LINE L2 1879 2294 -1020 1954 122 3 23 chr20 39181456 39181760 -27486245 - AluSg SINE Alu -12 298 1 608 335 173 24 chr20 39181760 39181993 -27486012 + L2 LINE L2 2294 2709 -605 352 290 121 59 chr20 39182134 39182441 -27485564 - L1ME4a LINE L1 -86 6035 5710 3661 120 64 3 chr20 39182445 39183035 -27484970 + L1MA5 LINE L1 5673 6298 -2 424 344 122 32 chr20 39183129 39183233 -27484772 - L1ME LINE L1 -369 5752 5659 2630 105 70 2 chr20 39183233 39183634 -27484371 - MSTA LTR MaLR 0 428 1 424 344 122 32 chr20 39183634 39183675 -27484330 - L1ME LINE L1 -462 5659 5623 1803 191 31 8 chr20 39183675 39184030 -27483975 - MLT1A1 LTR MaLR 0 365 3 424 344 122 32 chr20 39184030 39184194 -27483811 - L1ME LINE L1 -498 5623 5414 439 230 108 58 chr20 39184778 39184917 -27483088 - L2 LINE L2 -5 3308 3163 219 311 204 44 chr20 39185175 39185538 -27482467 - L2 LINE L2 -461 2853 2433 221 348 0 0 chr20 39185976 39186068 -27481937 + (CATATA)n Simple_repeat Simple_repeat 6 97 0 321 262 138 42 chr20 39186673 39186821 -27481184 - MIR3 SINE MIR -62 146 6 406 231 68 113 chr20 39187433 39187673 -27480332 - MIR SINE MIR -1 261 22 405 176 0 0 chr20 39187879 39187947 -27480058 + MER63 DNA MER1_type 684 751 -311 408 226 11 17 chr20 39189705 39189882 -27478123 + (TCCA)n Simple_repeat Simple_repeat 4 179 0 341 291 24 31 chr20 39189895 39190022 -27477983 - L2 LINE L2 0 3313 3188 230 356 0 37 chr20 39190261 39190396 -27477609 + (TATATG)n Simple_repeat Simple_repeat 6 135 0 * 352 357 14 0 chr20 39190295 39190435 -27477570 + (CA)n Simple_repeat Simple_repeat 2 143 0 695 126 27 9 chr20 39191355 39191466 -27476539 + MER81 DNA DNA 2 114 0 389 284 127 8 chr20 39191496 39191630 -27476375 - MIR SINE MIR 0 262 113 200 320 139 25 chr20 39191698 39191820 -27476185 - MIR SINE MIR 0 262 127 387 315 84 14 chr20 39192394 39192607 -27475398 - MIR SINE MIR -15 247 20 287 305 86 23 chr20 39192793 39192921 -27475084 + MIR SINE MIR 126 261 -1 790 226 28 11 chr20 39193228 39193409 -27474596 + MER5A DNA MER1_type 6 189 0 219 300 17 0 chr20 39193565 39193625 -27474380 - MER91 DNA MER1_type 0 190 130 193 278 19 19 chr20 39196035 39196089 -27471916 + MIR SINE MIR 21 74 -188 571 307 88 36 chr20 39196439 39196864 -27471141 + MLT1J1 LTR MaLR 28 445 -1 2131 232 61 20 chr20 39196874 39197470 -27470535 + MLT1E2 LTR MaLR 3 626 0 216 366 59 20 chr20 39197478 39197579 -27470426 + L2 LINE L2 3168 3272 0 918 218 57 19 chr20 39197625 39197836 -27470169 - MER58A DNA MER1_type -4 220 2 357 290 31 100 chr20 39198917 39199176 -27468829 - L2 LINE L2 -528 2786 2546 280 267 37 22 chr20 39199339 39199474 -27468531 - L1ME4a LINE L1 -11 6110 5974 590 275 111 53 chr20 39199496 39200019 -27467986 - L1ME4a LINE L1 -272 5849 5297 321 268 120 38 chr20 39200124 39200307 -27467698 - L1ME4a LINE L1 -945 5201 5004 546 266 28 10 chr20 39200329 39200481 -27467524 + MIR SINE MIR 12 163 -45 263 354 53 0 chr20 39200570 39200683 -27467322 + L2 LINE L2 3154 3272 0 523 333 19 88 chr20 39201132 39201495 -27466510 + L2 LINE L2 2919 3256 -16 213 292 229 0 chr20 39201541 39201685 -27466320 - L2 LINE L2 -8 3305 3129 589 264 18 36 chr20 39203026 39203204 -27464801 - MER5A DNA MER1_type -14 164 1 488 248 18 0 chr20 39203513 39203626 -27464379 - MER94 DNA DNA -1 133 19 427 271 222 0 chr20 39204219 39204422 -27463583 + MIR SINE MIR 13 260 -2 378 296 35 47 chr20 39205277 39205449 -27462556 + L1ME4a LINE L1 5692 5861 -260 1029 201 56 13 chr20 39205546 39205780 -27462225 - LTR16A1 LTR ERVL 0 457 214 275 278 0 0 chr20 39205787 39205859 -27462146 - LTR16A1 LTR ERVL -384 73 2 2773 76 3 6 chr20 39206041 39206397 -27461608 + THE1A LTR MaLR 1 355 0 12127 83 13 1 chr20 39206397 39207959 -27460046 + THE1A-int LTR MaLR 1 1580 0 2711 90 3 3 chr20 39207959 39208314 -27459691 + THE1A LTR MaLR 1 355 0 639 300 70 9 chr20 39208753 39208980 -27459025 - MIR SINE MIR -19 243 3 180 158 0 193 chr20 39209115 39209172 -27458833 + L2 LINE L2 3210 3255 -17 279 361 10 17 chr20 39209592 39209795 -27458210 + CT-rich Low_complexity Low_complexity 1 201 0 1236 228 126 6 chr20 39210046 39210388 -27457617 + L1ME3A LINE L1 5786 6168 -2 260 222 74 104 chr20 39210474 39210609 -27457396 + MER77 LTR ERV1 66 196 -409 * 1280 286 71 56 chr20 39210585 39211191 -27456814 + MER21B LTR ERV1 100 714 -149 2445 138 20 8 chr20 39211216 39211607 -27456398 - MER57A LTR ERV1 0 403 8 1017 207 85 30 chr20 39211637 39211942 -27456063 + LTR37A LTR ERV1 85 406 -20 332 301 0 18 chr20 39211975 39212088 -27455917 + MER5A DNA MER1_type 56 166 -23 834 275 71 11 chr20 39213025 39213305 -27454700 - LTR16C LTR ERVL 0 491 195 280 270 140 39 chr20 39213676 39213854 -27454151 - MIR SINE MIR -46 216 21 462 333 22 0 chr20 39213861 39214041 -27453964 + MIR SINE MIR 8 191 -71 1108 207 190 55 chr20 39214143 39214559 -27453446 + LTR33A LTR ERVL 3 474 -49 544 214 26 8 chr20 39215426 39215551 -27452454 + MLT1F1 LTR MaLR 52 170 -372 2384 108 0 3 chr20 39215556 39215863 -27452142 + AluSg SINE Alu 5 310 0 450 288 64 64 chr20 39215882 39216118 -27451887 + MLT1F1 LTR MaLR 161 396 -194 1285 130 43 17 chr20 39216157 39216388 -27451617 - MER96B DNA MER1_type? -177 240 4 773 307 4 4 chr20 39216511 39216736 -27451269 + MIR SINE MIR 38 262 0 1759 176 14 3 chr20 39216917 39217213 -27450792 - AluJo SINE Alu -13 299 1 318 234 0 0 chr20 39217520 39217627 -27450378 + (TG)n Simple_repeat Simple_repeat 2 108 0 239 216 328 9 chr20 39217628 39217744 -27450261 + L2 LINE L2 3161 3313 0 195 100 0 0 chr20 39217747 39217777 -27450228 + (TG)n Simple_repeat Simple_repeat 1 30 0 1099 248 94 33 chr20 39218818 39219242 -27448763 + LTR33A LTR ERVL 66 515 -8 469 293 104 22 chr20 39219382 39219604 -27448401 - MIR SINE MIR 0 262 23 467 202 8 50 chr20 39219705 39219824 -27448181 - MER103 DNA DNA -1 165 52 21 57 0 0 chr20 39219959 39219994 -27448011 + AT_rich Low_complexity Low_complexity 1 35 0 302 305 317 4 chr20 39220602 39220864 -27447141 - L3 LINE CR1 -674 903 560 479 281 157 5 chr20 39221821 39222031 -27445974 + MIR SINE MIR 17 258 -4 368 281 23 72 chr20 39222038 39222259 -27445746 + MIR SINE MIR 12 221 -41 396 131 60 0 chr20 39222434 39222518 -27445487 - L1MA7 LINE L1 0 6291 6203 294 53 0 158 chr20 39222600 39222657 -27445348 - L1PA3 LINE L1 0 6154 6107 187 359 19 9 chr20 39223359 39223465 -27444540 - MIR SINE MIR -2 260 154 266 209 47 47 chr20 39223465 39223551 -27444454 - MLT1J2 LTR MaLR 0 450 365 562 256 10 13 chr20 39223616 39223779 -27444226 - MLT1J2 LTR MaLR -189 220 61 261 317 39 19 chr20 39223836 39223940 -27444065 - MIR SINE MIR -78 130 23 1275 218 154 94 chr20 39224191 39224774 -27443231 + MLT1E1 LTR MaLR 7 624 0 252 280 21 11 chr20 39224776 39224869 -27443136 + MIR SINE MIR 156 249 -13 1125 226 121 56 chr20 39224989 39225418 -27442587 - LTR16A1 LTR ERVL 0 457 1 265 241 78 60 chr20 39225684 39225800 -27442205 - L2 LINE L2 -15 3298 3181 552 279 86 27 chr20 39226137 39226359 -27441646 + LTR16C LTR ERVL 247 481 -10 4247 129 17 46 chr20 39226428 39226785 -27441220 - L1MA4A LINE L1 -2 6301 5935 282 29 0 0 chr20 39226785 39226820 -27441185 + (TG)n Simple_repeat Simple_repeat 2 36 0 4247 129 17 46 chr20 39226820 39226832 -27441173 - L1MA4A LINE L1 -368 5935 5924 2561 80 0 0 chr20 39226832 39227143 -27440862 - AluSq SINE Alu -2 311 1 4247 129 17 46 chr20 39227143 39227549 -27440456 - L1MA4A LINE L1 -379 5924 5548 236 278 0 0 chr20 39227760 39227814 -27440191 - MER5A DNA MER1_type 0 189 136 1165 266 131 42 chr20 39227830 39228326 -27439679 - MLT1F LTR MaLR -2 540 1 185 325 12 38 chr20 39228326 39228406 -27439599 + MER5A DNA MER1_type 78 155 -34 586 201 11 116 chr20 39228408 39228447 -27439558 + MER5B DNA MER1_type 3 45 -133 2338 110 3 0 chr20 39228447 39228757 -27439248 + AluSx SINE Alu 1 311 -1 586 201 11 116 chr20 39228757 39228906 -27439099 + MER5B DNA MER1_type 45 171 -7 516 182 152 86 chr20 39228953 39229151 -27438854 + MLT1H1 LTR MaLR 54 264 -291 714 173 154 6 chr20 39229512 39229674 -27438331 - MER5A DNA MER1_type 0 189 4 603 176 46 0 chr20 39230137 39230245 -27437760 + MER81 DNA DNA 1 113 -1 649 303 80 31 chr20 39231044 39231394 -27436611 - LTR16A LTR ERVL -76 374 8 203 247 39 13 chr20 39231406 39231483 -27436522 + MIR SINE MIR 73 151 -111 615 175 47 85 chr20 39231529 39231740 -27436265 - L1MC5 LINE L1 -49 7912 7710 1639 160 3 23 chr20 39234224 39234524 -27433481 - L1MD3 LINE L1 -2 7993 7700 317 256 39 64 chr20 39234546 39234702 -27433303 - MIR SINE MIR -109 153 2 230 296 0 14 chr20 39234786 39234857 -27433148 + L2 LINE L2 2208 2277 -1037 272 282 77 0 chr20 39234935 39235013 -27432992 + L2 LINE L2 2299 2382 -932 337 315 9 9 chr20 39235607 39235715 -27432290 + MIR SINE MIR 47 154 -108 207 231 0 0 chr20 39236397 39236436 -27431569 + MIR SINE MIR 217 255 -7 332 281 50 8 chr20 39236474 39236595 -27431410 + L2 LINE L2 3176 3301 -12 234 277 0 0 chr20 39236796 39236861 -27431144 + MER116 DNA Mariner 16 80 0 255 289 24 12 chr20 39237068 39237151 -27430854 - MIR SINE MIR -102 106 23 236 316 59 48 chr20 39237384 39237571 -27430434 - Tigger8 DNA MER2_type -5 661 473 2126 209 31 18 chr20 39237573 39238119 -27429886 - L1MC4 LINE L1 0 8042 7490 297 171 57 0 chr20 39238152 39238222 -27429783 + MIR SINE MIR 184 257 -5 679 319 39 19 chr20 39238229 39238536 -27429469 - Tigger8 DNA MER2_type -207 459 147 605 293 19 64 chr20 39239234 39239500 -27428505 - MIR SINE MIR -6 256 3 618 268 26 32 chr20 39239575 39239765 -27428240 - MIR SINE MIR -6 256 68 247 313 0 12 chr20 39240424 39240504 -27427501 + GA-rich Low_complexity Low_complexity 1 79 0 220 333 49 12 chr20 39240702 39240864 -27427141 - MIR SINE MIR 0 262 95 22 35 0 0 chr20 39241092 39241121 -27426884 + AT_rich Low_complexity Low_complexity 1 29 0 1741 137 0 4 chr20 39241464 39241727 -27426278 + Tigger5 DNA MER2_type 2061 2322 -1 2148 216 104 75 chr20 39241727 39242721 -27425284 - L1MC5 LINE L1 -375 7586 6562 25 0 0 0 chr20 39243113 39243138 -27424867 + AT_rich Low_complexity Low_complexity 1 25 0 683 268 38 5 chr20 39243187 39243396 -27424609 + LTR16C LTR ERVL 276 491 0 522 263 33 47 chr20 39243656 39243869 -27424136 + MIR SINE MIR 3 212 -50 199 296 11 57 chr20 39243941 39243954 -27424051 - L3 LINE CR1 -350 1227 1215 1126 132 0 38 chr20 39243954 39244167 -27423838 - L1MA6 LINE L1 0 6300 6096 199 296 11 57 chr20 39244167 39244241 -27423764 - L3 LINE CR1 -362 1215 1144 1537 199 101 71 chr20 39245150 39245588 -27422417 - MER74C LTR ERVL 0 460 10 383 336 8 0 chr20 39245711 39245836 -27422169 - MER117 DNA MER1_type 0 197 72 435 300 52 91 chr20 39246668 39247128 -27420877 - L2 LINE L2 -4 3268 2827 289 250 42 28 chr20 39247167 39247239 -27420766 + MER69 DNA AcHobo 1 73 -1153 1905 200 52 24 chr20 39247256 39247276 -27420729 + MER69 DNA AcHobo 1944 1962 -564 2253 104 9 25 chr20 39247276 39247594 -27420411 - AluSp SINE Alu 0 313 1 1905 200 52 24 chr20 39247594 39248077 -27419928 + MER69 DNA AcHobo 1962 2461 -65 396 293 0 32 chr20 39250082 39250205 -27417800 + MER94 DNA DNA 1 119 -15 654 238 40 58 chr20 39250763 39250986 -27417019 + MER20 DNA MER1_type 1 219 0 640 274 46 14 chr20 39251287 39251506 -27416499 - MIR SINE MIR -13 249 24 1146 231 212 21 chr20 39251728 39252154 -27415851 + MLT1H LTR MaLR 1 548 -1 1347 242 127 60 chr20 39252323 39252750 -27415255 + MLT1G1 LTR MaLR 73 538 -57 2049 166 34 3 chr20 39252750 39253105 -27414900 - MER47A DNA MER2_type 0 366 1 1347 242 127 60 chr20 39253105 39253164 -27414841 + MLT1G1 LTR MaLR 538 592 -3 398 241 206 12 chr20 39253259 39253429 -27414576 + L2 LINE L2 3108 3310 -3 322 279 19 19 chr20 39253530 39253634 -27414371 - MIR SINE MIR -112 150 47 214 182 0 23 chr20 39253732 39253776 -27414229 + (CA)n Simple_repeat Simple_repeat 2 44 0 898 203 34 28 chr20 39254415 39254592 -27413413 + MER45A DNA AcHobo 1 178 0 490 311 99 55 chr20 39254808 39255191 -27412814 - MLT1K LTR MaLR -21 567 168 347 299 49 71 chr20 39255772 39255996 -27412009 - L2 LINE L2 -697 2617 2399 243 323 32 0 chr20 39256825 39256918 -27411087 + MIR SINE MIR 118 213 -49 1429 159 38 3 chr20 39257014 39257303 -27410702 + MER33 DNA MER1_type 26 324 0 740 255 99 83 chr20 39257496 39258223 -27409782 + L2 LINE L2 2560 3313 0 290 289 122 61 chr20 39259167 39259364 -27408641 - MIR SINE MIR -6 256 48 1755 251 42 5 chr20 39259812 39260218 -27407787 + LTR16C LTR ERVL 68 488 -3 3030 94 6 34 chr20 39260247 39260724 -27407281 + L1PA16 LINE L1 5702 6165 -1 1237 138 71 18 chr20 39260800 39261024 -27406981 - MER54B LTR ERVL -111 682 447 2313 97 0 3 chr20 39261315 39261613 -27406392 - AluSq SINE Alu -16 297 1 2059 95 15 0 chr20 39261863 39262127 -27405878 - AluSg SINE Alu -12 298 31 469 253 34 7 chr20 39262127 39262273 -27405732 - L1MC4a LINE L1 -1934 5874 5725 363 203 0 0 chr20 39262835 39262909 -27405096 - MER116 DNA Mariner -2 78 5 270 394 0 0 chr20 39263089 39263244 -27404761 - MER117 DNA MER1_type -6 191 37 236 317 103 0 chr20 39263706 39263851 -27404154 + MIR SINE MIR 90 249 -13 3573 133 51 16 chr20 39263984 39264321 -27403684 + Tigger3b DNA MER2_type 1 325 -2703 2146 122 3 0 chr20 39264321 39264609 -27403396 + AluSx SINE Alu 11 299 -13 3573 133 51 16 chr20 39264609 39264942 -27403063 + Tigger3b DNA MER2_type 325 694 -537 857 302 78 40 chr20 39264960 39266207 -27401798 + L1ME3 LINE L1 2311 3604 -2542 1081 261 75 48 chr20 39266323 39267139 -27400866 + L1ME3 LINE L1 3881 4718 -1428 12025 211 43 43 chr20 39267171 39268896 -27399109 + L1MA9 LINE L1 1 1725 -5547 2122 160 0 0 chr20 39268896 39269208 -27398797 - 7SLRNA srpRNA srpRNA -8 312 1 12025 211 43 43 chr20 39269208 39269497 -27398508 + L1MA9 LINE L1 1725 2013 -5259 2018 114 44 7 chr20 39269497 39269795 -27398210 + AluSc SINE Alu 1 309 0 12025 211 43 43 chr20 39269795 39271594 -27396411 + L1MA9 LINE L1 2013 3811 -3461 2673 89 16 5 chr20 39271594 39271965 -27396040 + THE1C LTR MaLR 1 375 0 12025 211 43 43 chr20 39271965 39272668 -27395337 + L1MA9 LINE L1 3811 4513 -2759 988 151 0 0 chr20 39272668 39272807 -27395198 + 7SLRNA srpRNA srpRNA 106 244 -76 12025 211 43 43 chr20 39272807 39273521 -27394484 + L1MA9 LINE L1 4513 5226 -2046 2184 163 81 2 chr20 39273521 39273914 -27394091 - MSTB LTR MaLR 0 426 3 12025 211 43 43 chr20 39273914 39274761 -27393244 + L1MA9 LINE L1 5226 6072 -1200 330 67 0 0 chr20 39274761 39274806 -27393199 + (CA)n Simple_repeat Simple_repeat 1 45 0 12025 211 43 43 chr20 39274806 39275307 -27392698 + L1MA9 LINE L1 6072 7272 0 1031 287 52 14 chr20 39275317 39276001 -27392004 + L1ME3 LINE L1 4738 5447 -717 425 286 151 5 chr20 39276049 39276255 -27391750 + L1ME3 LINE L1 5851 6086 -76 2215 128 0 0 chr20 39276328 39276624 -27391381 + AluSx SINE Alu 1 296 -16 548 251 31 42 chr20 39276962 39276977 -27391028 - MER5A DNA MER1_type 0 189 175 2134 120 0 0 chr20 39276977 39277260 -27390745 - AluSq SINE Alu -24 289 7 548 251 31 42 chr20 39277260 39277435 -27390570 - MER5A DNA MER1_type -14 175 1 373 298 202 39 chr20 39278490 39278772 -27389233 + LTR16C LTR ERVL 44 371 -120 508 287 207 35 chr20 39278785 39279210 -27388795 - L2 LINE L2 -8 3305 2808 289 279 6 32 chr20 39279523 39279681 -27388324 + (TATATG)n Simple_repeat Simple_repeat 1 154 0 627 283 149 35 chr20 39280516 39280831 -27387174 + MLT1H LTR MaLR 1 351 -198 421 193 17 67 chr20 39280862 39280981 -27387024 + MLT1H LTR MaLR 437 549 0 381 253 188 16 chr20 39280981 39281167 -27386838 - L3 LINE CR1 -124 1453 1236 532 318 99 18 chr20 39281182 39281465 -27386540 + L2 LINE L2 2660 2965 -349 284 380 100 0 chr20 39281485 39281635 -27386370 - L3 LINE CR1 -346 1231 1067 308 296 19 0 chr20 39282112 39282220 -27385785 - MIR SINE MIR 0 262 153 221 194 32 131 chr20 39282228 39282410 -27385595 + MER5B DNA MER1_type 1 150 -39 31 44 0 0 chr20 39282527 39282572 -27385433 + AT_rich Low_complexity Low_complexity 1 45 0 247 210 92 50 chr20 39282643 39282762 -27385243 - MER113 DNA MER1_type? -397 124 1 278 339 141 0 chr20 39283256 39283433 -27384572 + MIR SINE MIR 59 260 -2 239 260 79 39 chr20 39283739 39283866 -27384139 - MIR SINE MIR -11 251 120 1424 166 124 4 chr20 39284831 39285096 -27382909 + AluJb SINE Alu 1 297 -5 505 355 58 40 chr20 39285315 39285743 -27382262 + L3 LINE CR1 65 500 -1077 297 151 0 0 chr20 39285753 39285806 -27382199 + (TAA)n Simple_repeat Simple_repeat 2 54 0 226 338 12 25 chr20 39285875 39285955 -27382050 + L3 LINE CR1 567 645 -932 375 309 120 37 chr20 39286081 39286156 -27381849 + MIR SINE MIR 33 100 -162 2045 134 80 11 chr20 39286156 39286507 -27381498 + THE1C LTR MaLR 1 375 0 375 309 120 37 chr20 39286507 39286622 -27381383 + MIR SINE MIR 100 239 -23 598 278 93 64 chr20 39286708 39286822 -27381183 + L3 LINE CR1 700 809 -768 1611 84 5 19 chr20 39286822 39287035 -27380970 + AluSp SINE Alu 81 290 -23 598 278 93 64 chr20 39287035 39287308 -27380697 + L3 LINE CR1 809 1098 -479 595 325 63 45 chr20 39287336 39287398 -27380607 + L2 LINE L2 2718 2777 -536 2523 62 0 7 chr20 39287398 39287705 -27380300 + AluY SINE Alu 1 305 -6 595 325 63 45 chr20 39287705 39288025 -27379980 + L2 LINE L2 2777 3102 -211 35526 28 3 0 chr20 39288054 39293300 -27374705 + L1PA2 LINE L1 900 6151 -4 373 232 45 58 chr20 39293366 39293521 -27374484 + L2 LINE L2 3161 3313 0 1800 112 4 12 chr20 39293696 39293946 -27374059 - AluSg SINE Alu -13 297 50 318 50 0 0 chr20 39294303 39294343 -27373662 + (TG)n Simple_repeat Simple_repeat 1 40 0 184 266 16 47 chr20 39294550 39294614 -27373391 - L2 LINE L2 0 3313 3252 263 342 43 8 chr20 39294889 39295006 -27372999 + MIR SINE MIR 16 136 -126 249 83 0 0 chr20 39295461 39295497 -27372508 + (TG)n Simple_repeat Simple_repeat 2 37 0 299 176 0 15 chr20 39295642 39295710 -27372295 + CT-rich Low_complexity Low_complexity 2 68 0 400 321 74 16 chr20 39296033 39296223 -27371782 + MIR SINE MIR 47 247 -15 220 250 52 0 chr20 39297749 39297885 -27370120 + CT-rich Low_complexity Low_complexity 3 145 0 203 214 43 43 chr20 39297901 39297971 -27370034 - MIR SINE MIR -25 237 168 1897 100 21 7 chr20 39297987 39298276 -27369729 - L1PB3 LINE L1 -37 6117 5825 188 231 209 11 chr20 39298282 39298373 -27369632 - MIR SINE MIR -115 147 39 670 256 11 6 chr20 39299459 39299635 -27368370 - MER5B DNA MER1_type -1 177 1 356 221 39 0 chr20 39299801 39299878 -27368127 - MER5A DNA MER1_type -18 171 92 1332 219 116 73 chr20 39299878 39300050 -27367955 + MLT1F1 LTR MaLR 1 164 -403 2251 117 3 0 chr20 39300050 39300359 -27367646 + AluSq SINE Alu 1 310 -3 1332 219 116 73 chr20 39300359 39300712 -27367293 + MLT1F1 LTR MaLR 164 559 -8 547 181 64 0 chr20 39300712 39300806 -27367199 - MER5A DNA MER1_type -89 100 1 486 294 35 12 chr20 39300819 39300988 -27367017 - MIR SINE MIR -38 170 2 886 211 74 0 chr20 39301191 39301366 -27366639 - MER5A DNA MER1_type -1 188 1 263 292 45 0 chr20 39302611 39302700 -27365305 + MLT1I LTR MaLR 284 376 -33 442 276 111 31 chr20 39302952 39303306 -27364699 + L1ME LINE L1 5127 5511 -653 291 311 0 142 chr20 39303333 39303523 -27364482 - L2 LINE L2 -86 3186 3024 513 180 0 33 chr20 39303796 39303918 -27364087 + L1MA8 LINE L1 6173 6290 -1 29 60 0 0 chr20 39304087 39304137 -27363868 + AT_rich Low_complexity Low_complexity 1 50 0 207 286 0 0 chr20 39304281 39304358 -27363647 + (TA)n Simple_repeat Simple_repeat 1 77 0 374 254 50 29 chr20 39304843 39305083 -27362922 - L1ME LINE L1 -659 5787 5543 1340 296 77 38 chr20 39305084 39306482 -27361523 - L1ME LINE L1 -904 5522 4071 282 29 0 0 chr20 39306484 39306519 -27361486 + (TG)n Simple_repeat Simple_repeat 2 36 0 234 185 46 0 chr20 39306519 39306584 -27361421 + (TA)n Simple_repeat Simple_repeat 2 69 0 510 135 11 0 chr20 39306588 39306677 -27361328 - L1MA9 LINE L1 -236 6076 5987 315 171 40 26 chr20 39306692 39306768 -27361237 - L1ME LINE L1 -4361 2065 1989 2524 136 28 15 chr20 39306837 39307294 -27360711 + L1MA9 LINE L1 5850 6312 0 286 268 0 32 chr20 39307400 39307523 -27360482 - L1ME LINE L1 -5348 1068 950 300 377 101 53 chr20 39307574 39307932 -27360073 - L1ME LINE L1 -5734 682 308 24 32 0 0 chr20 39307946 39307977 -27360028 + AT_rich Low_complexity Low_complexity 1 31 0 293 312 50 50 chr20 39308178 39308319 -27359686 + MER5A DNA MER1_type 1 141 -48 1900 164 3 13 chr20 39308646 39308950 -27359055 - AluSx SINE Alu -11 301 1 21 36 0 0 chr20 39309630 39309658 -27358347 + AT_rich Low_complexity Low_complexity 1 28 0 224 292 135 10 chr20 39310576 39310672 -27357333 - MIR SINE MIR -109 153 46 209 269 125 10 chr20 39310650 39310754 -27357251 + MIR SINE MIR 37 152 -56 * 999 273 107 37 chr20 39310769 39311198 -27356807 - L2 LINE L2 0 3313 2855 1076 213 47 24 chr20 39311236 39311489 -27356516 - MLT1A1 LTR MaLR -106 259 1 285 299 87 69 chr20 39312421 39312617 -27355388 - MIR SINE MIR -50 212 15 937 215 10 10 chr20 39313084 39313293 -27354712 + MER3 DNA MER1_type 1 209 0 1113 289 38 8 chr20 39313317 39313690 -27354315 + LTR16A LTR ERVL 50 433 -17 272 325 37 49 chr20 39313974 39314137 -27353868 - L2 LINE L2 -1 3271 3111 1281 201 14 24 chr20 39314238 39314532 -27353473 + MER58B DNA MER1_type 51 341 0 314 341 14 29 chr20 39314541 39314679 -27353326 - L2 LINE L2 -217 3055 2920 589 219 0 0 chr20 39314726 39314840 -27353165 + AluJo SINE Alu 1 114 -188 180 0 0 0 chr20 39314844 39314864 -27353141 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 774 185 0 15 chr20 39314865 39315000 -27353005 + AluJo SINE Alu 168 300 -12 232 348 132 25 chr20 39315070 39315274 -27352731 - L2 LINE L2 -527 2787 2562 215 277 0 0 chr20 39315581 39315628 -27352377 + (TAA)n Simple_repeat Simple_repeat 3 49 0 366 260 62 34 chr20 39316341 39316487 -27351518 - MIR SINE MIR -65 197 48 482 308 155 19 chr20 39316566 39316888 -27351117 + L2 LINE L2 2946 3311 -2 235 349 5 80 chr20 39317161 39317373 -27350632 - MIR SINE MIR -19 243 48 895 235 18 32 chr20 39317401 39317622 -27350383 + MIR SINE MIR 12 229 -33 338 83 0 17 chr20 39317638 39317698 -27350307 + (CAT)n Simple_repeat Simple_repeat 2 60 0 2530 214 19 14 chr20 39317737 39318250 -27349755 + MLT2B1 LTR ERVL 5 520 0 207 256 0 0 chr20 39319971 39320010 -27347995 - L2 LINE L2 -12 3301 3263 * 228 132 26 0 chr20 39319976 39320014 -27347991 - MIR SINE MIR -11 251 213 679 236 84 15 chr20 39320151 39320354 -27347651 + MLT1C LTR MaLR 251 467 0 196 260 219 10 chr20 39320355 39320451 -27347554 + MIR SINE MIR 70 185 -77 220 250 135 54 chr20 39320579 39320727 -27347278 + MIR SINE MIR 41 200 -62 1872 127 187 14 chr20 39320925 39321288 -27346717 + MSTA LTR MaLR 1 426 -2 399 124 54 132 chr20 39321611 39321740 -27346265 - MLT1C LTR MaLR -343 124 6 696 275 5 5 chr20 39322186 39322375 -27345630 - MER5A DNA MER1_type 0 189 1 207 0 0 0 chr20 39323388 39323411 -27344594 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 242 271 19 56 chr20 39323902 39324009 -27343996 + L2 LINE L2 3182 3284 -29 2128 111 0 14 chr20 39324379 39324676 -27343329 + AluSx SINE Alu 1 293 -19 463 31 31 0 chr20 39325423 39325488 -27342517 + (TATATG)n Simple_repeat Simple_repeat 2 68 0 281 215 63 0 chr20 39325502 39325581 -27342424 + (CATATA)n Simple_repeat Simple_repeat 2 85 0 541 270 128 18 chr20 39325692 39325966 -27342039 + LTR16C LTR ERVL 188 491 0 1658 164 65 14 chr20 39327151 39327518 -27340487 + L1MB1 LINE L1 5783 6168 0 274 263 125 0 chr20 39327566 39327646 -27340359 + MIR SINE MIR 108 197 -65 525 291 45 49 chr20 39327704 39327900 -27340105 + MIR SINE MIR 19 211 -51 2162 131 0 0 chr20 39328606 39328897 -27339108 - AluSx SINE Alu -20 292 2 228 86 0 0 chr20 39328978 39329013 -27338992 + (T)n Simple_repeat Simple_repeat 1 35 0 5021 160 17 33 chr20 39329197 39329871 -27338134 + L1PA16 LINE L1 4801 5484 -682 183 80 0 0 chr20 39329871 39329896 -27338109 + (CAA)n Simple_repeat Simple_repeat 2 26 0 5021 160 17 33 chr20 39329896 39330218 -27337787 + L1PA16 LINE L1 5484 5810 -356 210 37 0 0 chr20 39330218 39330245 -27337760 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 5021 160 17 33 chr20 39330245 39330625 -27337380 + L1PA16 LINE L1 5810 6157 -9 693 272 92 27 chr20 39330861 39331350 -27336655 - L1ME LINE L1 -302 5819 5299 662 342 67 19 chr20 39331867 39332183 -27335822 + L3 LINE CR1 1149 1479 -98 274 369 37 53 chr20 39332200 39332444 -27335561 + L2 LINE L2 2594 2833 -481 187 285 23 115 chr20 39332491 39332621 -27335384 + L2 LINE L2 2933 3050 -222 584 294 35 30 chr20 39332772 39332969 -27335036 - MIR SINE MIR -14 248 51 261 269 83 19 chr20 39332970 39333078 -27334927 + LTR16B LTR ERVL 342 456 -8 1899 39 0 8 chr20 39333441 39333675 -27334330 + L1PA5 LINE L1 5916 6147 -7 638 308 47 39 chr20 39333680 39334018 -27333987 + HERVL LTR ERVL 3909 4249 -1405 314 311 17 34 chr20 39334297 39334416 -27333589 - MIR SINE MIR -80 128 12 306 0 0 0 chr20 39334832 39334866 -27333139 + (TG)n Simple_repeat Simple_repeat 2 35 0 265 297 144 35 chr20 39334984 39335186 -27332819 - MLT1K LTR MaLR 0 588 365 21 0 0 0 chr20 39335531 39335552 -27332453 + AT_rich Low_complexity Low_complexity 1 21 0 231 61 0 0 chr20 39336069 39336102 -27331903 + (TC)n Simple_repeat Simple_repeat 2 34 0 267 31 0 0 chr20 39336103 39336135 -27331870 + (CA)n Simple_repeat Simple_repeat 2 33 0 707 293 66 26 chr20 39336508 39336781 -27331224 - L3 LINE CR1 -1 1576 1293 190 256 13 64 chr20 39336885 39336963 -27331042 - MIR SINE MIR -12 250 177 194 200 0 0 chr20 39338405 39338445 -27329560 + L2 LINE L2 3014 3053 -219 369 233 48 101 chr20 39338879 39339068 -27328937 + MER117 DNA MER1_type 18 196 -1 283 218 172 23 chr20 39339449 39339536 -27328469 + L2 LINE L2 3214 3313 0 300 308 30 8 chr20 39339665 39339798 -27328207 - L2 LINE L2 -777 2537 2402 358 190 63 0 chr20 39339897 39339976 -27328029 + L2 LINE L2 3168 3251 -21 208 239 0 0 chr20 39340535 39340581 -27327424 + MIR SINE MIR 206 251 -11 590 222 64 41 chr20 39341085 39341256 -27326749 + MER5B DNA MER1_type 1 175 -3 2628 152 13 6 chr20 39341302 39341775 -27326230 - L1MA9 LINE L1 -1 6311 5836 1729 179 3 18 chr20 39342926 39343288 -27324717 - AluJb SINE Alu 0 358 1 770 209 121 24 chr20 39343676 39343882 -27324123 + MIR SINE MIR 36 261 -1 249 339 16 0 chr20 39343940 39344002 -27324003 - L2 LINE L2 0 3272 3210 1384 78 5 44 chr20 39344079 39344283 -27323722 - MER107 DNA MER1_type 0 197 2 220 293 13 13 chr20 39344804 39344879 -27323126 - MIR3 SINE MIR -1 207 133 300 127 0 0 chr20 39345259 39345314 -27322691 + (CAT)n Simple_repeat Simple_repeat 2 56 0 858 204 74 0 chr20 39345335 39345511 -27322494 + MER5A DNA MER1_type 1 189 0 569 210 93 12 chr20 39345511 39345678 -27322327 - MIR SINE MIR -34 228 52 1974 135 3 20 chr20 39345710 39346037 -27321968 - AluSx SINE Alu 0 312 1 244 32 0 0 chr20 39346046 39346077 -27321928 - L1PA13 LINE L1 -19 6144 6114 188 406 49 8 chr20 39346505 39346628 -27321377 - MIR SINE MIR -65 143 16 228 194 32 16 chr20 39346831 39346870 -27321135 + L1MC3 LINE L1 6609 6646 -1139 2302 194 24 58 chr20 39346870 39346926 -27321079 - MLT2B1 LTR ERVL 0 520 464 243 0 0 0 chr20 39346926 39346953 -27321052 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1342 171 68 43 chr20 39346955 39347236 -27320769 - AluJb SINE Alu -24 288 1 2302 194 24 58 chr20 39347236 39347711 -27320294 - MLT2B1 LTR ERVL -57 463 4 228 194 32 16 chr20 39347711 39347733 -27320272 + L1MC3 LINE L1 6646 6671 -1114 482 139 12 0 chr20 39347836 39347922 -27320083 + CT-rich Low_complexity Low_complexity 1 87 0 638 245 231 18 chr20 39347966 39348433 -27319572 + MLT1G3 LTR MaLR 38 530 0 21 0 0 0 chr20 39351215 39351236 -27316769 + AT_rich Low_complexity Low_complexity 1 21 0 196 286 66 121 chr20 39351622 39351804 -27316201 + L2 LINE L2 2992 3163 -109 189 0 0 0 chr20 39352334 39352355 -27315650 + (T)n Simple_repeat Simple_repeat 1 21 0 643 199 45 136 chr20 39352902 39353189 -27314816 + MLT1B LTR MaLR 3 263 -127 784 29 0 0 chr20 39353189 39353295 -27314710 - L1PA2 LINE L1 -329 5826 5721 21 57 0 0 chr20 39353296 39353331 -27314674 + AT_rich Low_complexity Low_complexity 1 35 0 493 246 35 7 chr20 39353339 39353481 -27314524 + MLT1B LTR MaLR 245 390 0 334 287 99 7 chr20 39353530 39353698 -27314307 + MIR SINE MIR 30 210 -52 21 0 0 0 chr20 39353978 39353999 -27314006 + AT_rich Low_complexity Low_complexity 1 21 0 891 296 55 49 chr20 39354004 39354510 -27313495 - LTR33 LTR ERVL -12 509 1 1150 91 91 0 chr20 39354611 39354798 -27313207 + L1MA2 LINE L1 6101 6304 0 2611 62 0 0 chr20 39355115 39355421 -27312584 - AluY SINE Alu -5 306 1 1288 220 23 3 chr20 39355426 39355726 -27312279 - L1MD2 LINE L1 -10 6743 6438 1486 90 33 0 chr20 39355726 39355971 -27312034 - L1MA1 LINE L1 -158 6144 5892 1811 131 8 0 chr20 39356027 39356295 -27311710 - AluSq SINE Alu -35 278 9 3308 201 50 31 chr20 39356300 39357692 -27310313 - L1MD2 LINE L1 -315 6438 5024 718 197 0 7 chr20 39357727 39357864 -27310141 + Tigger1 DNA MER2_type 1 136 -2282 1338 173 78 0 chr20 39357898 39358182 -27309823 - L1MA4 LINE L1 -11 6289 5984 942 207 26 0 chr20 39358183 39358376 -27309629 + Tigger1 DNA MER2_type 2221 2418 0 3643 243 62 13 chr20 39358378 39359584 -27308421 - L1MD2 LINE L1 -1544 4996 3732 2134 218 47 24 chr20 39359567 39360204 -27307801 - L1MD2 LINE L1 -4510 2030 1379 * 1699 139 68 49 chr20 39360725 39361091 -27306914 + THE1C LTR MaLR 3 375 0 1927 130 32 66 chr20 39361617 39361994 -27306011 - THE1B LTR MaLR 0 364 1 227 228 0 18 chr20 39362162 39362213 -27305792 + L1ME LINE L1 5614 5664 -452 2246 78 0 50 chr20 39362213 39362533 -27305472 - AluY SINE Alu -7 304 1 362 309 99 43 chr20 39362680 39362701 -27305304 + MIR SINE MIR 7 25 -237 1093 187 49 115 chr20 39362701 39363092 -27304913 - MLT1A1 LTR MaLR 0 365 1 362 309 99 43 chr20 39363092 39363303 -27304702 + MIR SINE MIR 25 252 -10 755 254 28 0 chr20 39363322 39363503 -27304502 + MER58A DNA MER1_type 39 224 0 189 214 0 0 chr20 39364211 39364253 -27303752 + (TATATG)n Simple_repeat Simple_repeat 3 44 0 2230 98 0 47 chr20 39364421 39364739 -27303266 - AluSx SINE Alu -4 308 6 689 287 60 51 chr20 39364867 39365007 -27302998 - L1MEc LINE L1 -5089 1307 1170 1080 144 53 0 chr20 39365007 39365195 -27302810 - L1PA16 LINE L1 -9 6157 5960 689 287 60 51 chr20 39365195 39365724 -27302281 - L1MEc LINE L1 -5226 1170 632 749 204 93 0 chr20 39365725 39365887 -27302118 - MER58C DNA MER1_type -1 214 38 367 359 85 50 chr20 39365929 39366444 -27301561 - L1MEc LINE L1 -5828 568 36 260 396 61 13 chr20 39366444 39366674 -27301331 + L2 LINE L2 2686 2926 -388 475 328 17 0 chr20 39366962 39367136 -27300869 - Charlie8 DNA MER1_type -2152 265 88 270 0 0 0 chr20 39367136 39367166 -27300839 + (CA)n Simple_repeat Simple_repeat 2 31 0 520 346 117 53 chr20 39367446 39368180 -27299825 - L3 LINE CR1 -6 1571 791 270 81 0 0 chr20 39368275 39368312 -27299693 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 549 303 82 25 chr20 39368512 39369185 -27298820 + L1M4 LINE L1 3849 4559 -1587 1390 308 33 10 chr20 39369511 39369998 -27298007 - LTR33 LTR ERVL -23 498 1 455 248 62 31 chr20 39370423 39370552 -27297453 - L2 LINE L2 -6 3307 3175 2358 102 0 6 chr20 39370674 39370987 -27297018 - AluSx SINE Alu -1 311 1 275 244 50 75 chr20 39371900 39372060 -27295945 - MER103 DNA DNA -4 162 7 470 293 30 18 chr20 39372445 39372612 -27295393 + MIR3 SINE MIR 29 197 -11 217 313 45 0 chr20 39373036 39373103 -27294902 + MIR SINE MIR 22 91 -171 782 136 277 5 chr20 39373111 39373295 -27294710 - MER46A DNA MER2_type -2 234 1 632 314 102 35 chr20 39374261 39374713 -27293292 + L2 LINE L2 2832 3313 0 533 236 84 42 chr20 39375052 39375315 -27292690 - HAL1 LINE L1 -1047 1460 1187 204 83 56 0 chr20 39375557 39375593 -27292412 + T-rich Low_complexity Low_complexity 2 39 0 539 268 149 0 chr20 39376473 39376667 -27291338 + Charlie1 DNA MER1_type 4 226 -2535 455 183 0 88 chr20 39376664 39376801 -27291204 + Charlie1 DNA MER1_type 2623 2747 -14 * 793 242 84 47 chr20 39376819 39377117 -27290888 - L2 LINE L2 0 3313 3005 533 326 31 13 chr20 39377336 39377563 -27290442 - MIR SINE MIR -26 236 6 550 372 85 26 chr20 39377709 39378586 -27289419 - L2 LINE L2 -187 3085 2164 261 0 0 0 chr20 39379497 39379526 -27288479 + (CAAT)n Simple_repeat Simple_repeat 2 30 0 507 352 6 0 chr20 39379551 39379727 -27288278 + MIR SINE MIR 15 191 -71 254 246 0 0 chr20 39379751 39379808 -27288197 + (TTG)n Simple_repeat Simple_repeat 2 58 0 1909 117 37 0 chr20 39380132 39380405 -27287600 + AluY SINE Alu 16 298 -13 652 312 32 43 chr20 39380421 39380700 -27287305 - L2 LINE L2 -2 3311 3036 973 214 11 0 chr20 39381073 39381260 -27286745 + MER5A DNA MER1_type 1 189 0 988 191 8 77 chr20 39381397 39381632 -27286373 - MER20 DNA MER1_type 0 219 1 283 204 74 28 chr20 39381708 39381816 -27286189 + MIR SINE MIR 148 260 -2 747 266 87 68 chr20 39383795 39384459 -27283546 - L2 LINE L2 0 3313 2649 339 270 58 58 chr20 39384803 39384940 -27283065 + MIR SINE MIR 126 262 0 1463 215 138 33 chr20 39385501 39385956 -27282049 - MLT1D LTR MaLR -2 503 1 221 211 19 0 chr20 39385976 39386028 -27281977 + (TA)n Simple_repeat Simple_repeat 2 54 0 1051 176 22 102 chr20 39387331 39387655 -27280350 - L1ME2 LINE L1 -20 6144 5847 201 109 219 78 chr20 39387911 39387975 -27280030 - MER5B DNA MER1_type -105 73 1 23 0 0 0 chr20 39388303 39388326 -27279679 + AT_rich Low_complexity Low_complexity 1 23 0 759 237 12 6 chr20 39388492 39388661 -27279344 + MER5B DNA MER1_type 6 175 -3 373 213 28 19 chr20 39388662 39388770 -27279235 - MLT1J2 LTR MaLR -297 153 45 214 347 10 0 chr20 39389081 39389179 -27278826 - L2 LINE L2 -655 2659 2561 7857 13 0 0 chr20 39389725 39390952 -27277053 - L1PA3 LINE L1 -2 6153 4931 6127 26 0 0 chr20 39390952 39391714 -27276291 + L1P LINE L1 4218 4979 -1167 1992 160 73 18 chr20 39392197 39392634 -27275371 - L1MB7 LINE L1 -20 6164 5704 497 276 166 20 chr20 39393965 39394164 -27273841 + MIR SINE MIR 25 252 -10 568 280 69 11 chr20 39394297 39394472 -27273533 + MIR SINE MIR 75 259 -3 1993 154 2 50 chr20 39395260 39395662 -27272343 - MLT1B LTR MaLR -7 383 1 264 209 0 0 chr20 39395727 39395770 -27272235 + MIR SINE MIR 61 103 -105 468 261 17 0 chr20 39395772 39395891 -27272114 - MER94 DNA DNA -9 125 5 939 219 45 42 chr20 39396069 39396356 -27271649 - MER21B LTR ERV1 -54 809 522 1134 243 66 18 chr20 39396542 39396875 -27271130 - MER21B LTR ERV1 -415 448 100 300 186 0 128 chr20 39396935 39397021 -27270984 - MER21B LTR ERV1 -777 86 12 231 342 0 0 chr20 39397908 39397987 -27270018 + MER5A DNA MER1_type 111 189 0 652 245 129 4 chr20 39398139 39398372 -27269633 + ORSL DNA AcHobo 1 262 -13 2343 100 10 3 chr20 39398783 39399094 -27268911 + AluSq SINE Alu 1 313 0 547 209 61 27 chr20 39399436 39399584 -27268421 + HsTC2 DNA Tc2 2 154 -1744 297 242 74 11 chr20 39399582 39399677 -27268328 + HsTC2 DNA Tc2 1234 1334 -564 * 528 183 150 6 chr20 39399709 39399889 -27268116 + HsTC2 DNA Tc2 1690 1895 -3 253 291 221 0 chr20 39399914 39400000 -27268005 + L2 LINE L2 3202 3306 -7 1078 204 0 14 chr20 39400144 39400364 -27267641 - MER58A DNA MER1_type -2 222 6 345 284 12 1 chr20 39400374 39400464 -27267541 - MER5A DNA MER1_type 0 189 89 575 304 37 5 chr20 39401285 39401476 -27266529 - MIR SINE MIR -30 232 36 496 293 75 0 chr20 39401891 39402038 -27265967 + L2 LINE L2 1051 1208 -2106 779 208 110 13 chr20 39402044 39402280 -27265725 + L1ME1 LINE L1 5903 6161 -5 8007 63 24 23 chr20 39402355 39403533 -27264472 + LTR19A-int LTR ERV1 2332 3510 -2076 16453 23 1 1 chr20 39403540 39406253 -27261752 - L1PA4 LINE L1 -3 6152 3438 2479 33 18 0 chr20 39406254 39406585 -27261420 + L1P LINE L1 2757 3093 -3053 2713 72 11 0 chr20 39406585 39406961 -27261044 + LTR19A-int LTR ERV1 3502 3881 -1705 * 10062 78 29 6 chr20 39406953 39408373 -27259632 + LTR19A-int LTR ERV1 4134 5586 0 2430 122 45 61 chr20 39408373 39408867 -27259138 + LTR19A LTR ERV1 1 486 0 462 348 64 51 chr20 39410132 39410663 -27257342 + L2 LINE L2 2431 2968 -346 412 302 102 68 chr20 39410666 39410820 -27257185 - L2 LINE L2 -1 3312 3165 2044 99 0 14 chr20 39410820 39411104 -27256901 + AluSg1 SINE Alu 30 309 0 412 302 102 68 chr20 39411104 39411474 -27256531 - L2 LINE L2 -148 3165 2766 1534 206 77 75 chr20 39411474 39411940 -27256065 - MLT1C LTR MaLR 0 467 1 412 302 102 68 chr20 39411940 39411970 -27256035 - L2 LINE L2 -547 2766 2738 2134 172 49 0 chr20 39412595 39412943 -27255062 + MLT1A1 LTR MaLR 1 365 0 669 235 140 53 chr20 39413593 39414015 -27253990 + MLT1C LTR MaLR 1 467 0 328 288 106 8 chr20 39414017 39414149 -27253856 + LTR67 LTR ERVL 411 555 -2 255 341 159 0 chr20 39414584 39414710 -27253295 - MER117 DNA MER1_type -43 154 9 4508 178 29 12 chr20 39415314 39416228 -27251777 + L1PB4 LINE L1 5244 6300 -3 2205 109 10 13 chr20 39416277 39416588 -27251417 + AluSx SINE Alu 1 310 -2 692 270 73 39 chr20 39416955 39417429 -27250576 - LTR33 LTR ERVL -1 520 4 342 328 8 8 chr20 39418430 39418549 -27249456 + MIR SINE MIR 3 121 -141 581 275 62 29 chr20 39418884 39419124 -27248881 + L1ME4a LINE L1 5672 5919 -202 25 31 0 0 chr20 39419237 39419269 -27248736 + AT_rich Low_complexity Low_complexity 1 32 0 455 323 99 14 chr20 39419553 39419776 -27248229 - MIR SINE MIR -19 243 2 208 254 0 51 chr20 39419972 39420031 -27247974 - L2 LINE L2 -3 3269 3214 332 283 42 17 chr20 39420338 39420458 -27247547 + MIR SINE MIR 103 225 -37 536 299 94 16 chr20 39420749 39420993 -27247012 + LTR33 LTR ERVL 23 285 -236 2690 39 0 6 chr20 39422717 39423029 -27244976 - AluY SINE Alu -1 310 1 1181 296 50 17 chr20 39424537 39424641 -27243364 - LTR16C LTR ERVL -3 488 389 2311 102 68 34 chr20 39424641 39424993 -27243012 + THE1B LTR MaLR 1 364 0 1181 296 50 17 chr20 39424993 39425249 -27242756 - LTR16C LTR ERVL -102 389 116 1087 202 4 63 chr20 39425249 39425429 -27242576 + L1MDa LINE L1 35 197 -6343 2387 83 0 0 chr20 39425429 39425729 -27242276 + AluY SINE Alu 1 300 -11 1087 202 4 63 chr20 39425729 39425800 -27242205 + L1MDa LINE L1 197 271 -6269 8038 233 50 33 chr20 39425819 39427450 -27240555 + L1MDa LINE L1 1131 2734 -3806 4911 38 0 2 chr20 39427450 39428002 -27240003 - L1PA4 LINE L1 -8 6147 5597 8038 233 50 33 chr20 39428002 39428327 -27239678 + L1MDa LINE L1 2734 3052 -3488 2486 162 61 2 chr20 39428327 39428722 -27239283 + MER47B DNA MER2_type 1 418 0 8038 233 50 33 chr20 39428722 39430830 -27237175 + L1MDa LINE L1 3052 5253 -1287 2441 222 72 22 chr20 39430827 39431494 -27236511 - L1MD2 LINE L1 0 6359 5660 * 2389 96 3 0 chr20 39432147 39432459 -27235546 + AluSp SINE Alu 1 313 0 4450 154 77 42 chr20 39432857 39433806 -27234199 + L1MB3 LINE L1 5587 6566 -11 5165 99 0 1 chr20 39434194 39434862 -27233143 + L1PA13 LINE L1 5478 6144 -19 22 0 0 0 chr20 39436367 39436389 -27231616 + AT_rich Low_complexity Low_complexity 1 22 0 192 77 0 0 chr20 39436916 39436942 -27231063 + (TCC)n Simple_repeat Simple_repeat 2 27 0 650 280 109 39 chr20 39437276 39437336 -27230669 + L2 LINE L2 2558 2612 -701 1807 152 14 14 chr20 39437336 39437626 -27230379 - AluSg SINE Alu -20 290 1 650 280 109 39 chr20 39437626 39438005 -27230000 + L2 LINE L2 2612 3026 -287 195 322 191 0 chr20 39438336 39438451 -27229554 + L2 LINE L2 3136 3272 0 366 306 211 6 chr20 39439093 39439273 -27228732 + MIR SINE MIR 37 253 -9 198 336 96 0 chr20 39440233 39440337 -27227668 - L2 LINE L2 -700 2614 2501 321 26 0 0 chr20 39440605 39440643 -27227362 + (A)n Simple_repeat Simple_repeat 1 38 0 384 219 37 24 chr20 39441537 39441619 -27226386 + L2 LINE L2 3172 3254 -18 228 350 10 0 chr20 39441624 39441727 -27226278 + MIR SINE MIR 131 234 -28 1177 233 5 0 chr20 39441763 39441986 -27226019 - MER58A DNA MER1_type 0 224 1 287 307 49 91 chr20 39442440 39442704 -27225301 - L2 LINE L2 -2 3270 3018 329 251 121 0 chr20 39443417 39443553 -27224452 - MIR SINE MIR -27 235 76 546 287 44 22 chr20 39444821 39445002 -27223003 - MIR SINE MIR -19 243 59 420 37 0 0 chr20 39445007 39445061 -27222944 + (TA)n Simple_repeat Simple_repeat 2 55 0 1991 114 0 0 chr20 39445098 39445361 -27222644 - AluSx SINE Alu -49 263 1 2475 54 3 0 chr20 39445655 39445949 -27222056 + AluY SINE Alu 1 295 -16 282 193 6 17 chr20 39446182 39446251 -27221754 + MLT1H LTR MaLR 485 549 0 264 300 11 22 chr20 39446298 39446388 -27221617 - MIR SINE MIR -72 136 48 281 269 48 39 chr20 39446654 39446758 -27221247 - MIR SINE MIR -41 221 117 234 224 26 53 chr20 39446873 39446949 -27221056 - MIR3 SINE MIR -46 162 89 209 266 119 37 chr20 39447220 39447329 -27220676 + MIR SINE MIR 120 237 -25 523 323 51 13 chr20 39447335 39447579 -27220426 - MIR SINE MIR 0 262 13 184 338 0 27 chr20 39448739 39448813 -27219192 - MIR SINE MIR 0 262 191 441 339 68 70 chr20 39448924 39449393 -27218612 - L2 LINE L2 -1 3271 2804 920 256 12 16 chr20 39449972 39450218 -27217787 - MIR SINE MIR -5 257 13 200 211 0 18 chr20 39450776 39450833 -27217172 + CT-rich Low_complexity Low_complexity 3 58 0 1162 229 9 5 chr20 39451198 39451421 -27216584 - MER58A DNA MER1_type 0 224 1 533 271 71 65 chr20 39452169 39452541 -27215464 + LTR16A1 LTR ERVL 73 427 -30 27 49 0 0 chr20 39453275 39453316 -27214689 + AT_rich Low_complexity Low_complexity 1 41 0 4376 179 24 67 chr20 39453377 39454417 -27213588 - L1MA9 LINE L1 -39 6273 5279 710 240 28 60 chr20 39454575 39454792 -27213213 - MER63A DNA MER1_type 0 210 1 339 302 112 9 chr20 39455449 39455565 -27212440 + MIR SINE MIR 37 164 -98 2317 61 0 0 chr20 39455744 39456023 -27211982 + AluY SINE Alu 1 279 -32 222 37 0 0 chr20 39456023 39456050 -27211955 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 185 191 32 95 chr20 39456465 39456528 -27211477 + MER5B DNA MER1_type 91 149 -29 516 229 44 62 chr20 39456941 39457168 -27210837 - L1ME4a LINE L1 -207 5914 5692 2167 107 7 0 chr20 39457168 39457457 -27210548 + AluSq SINE Alu 23 313 0 1507 44 0 11 chr20 39458882 39459062 -27208943 + L1PA7 LINE L1 5977 6154 0 2158 180 34 102 chr20 39459165 39459319 -27208686 - L1MD3 LINE L1 -19 7976 7813 1769 166 44 93 chr20 39459319 39459771 -27208234 + MSTB1 LTR MaLR 3 432 0 2158 180 34 102 chr20 39459771 39460204 -27207801 - L1MD3 LINE L1 -182 7813 7429 2505 84 0 0 chr20 39460310 39460620 -27207385 - AluY SINE Alu -1 310 1 389 301 52 7 chr20 39460847 39461000 -27207005 + MIR SINE MIR 97 256 -6 496 209 0 0 chr20 39461901 39461987 -27206018 + MLT1E1 LTR MaLR 1 86 -568 * 1664 215 29 81 chr20 39461985 39462441 -27205564 + MLT1E1 LTR MaLR 223 654 0 1837 116 8 0 chr20 39463032 39463283 -27204722 - AluSx SINE Alu 0 312 60 776 289 113 21 chr20 39463310 39463691 -27204314 + L2 LINE L2 2898 3313 0 973 278 88 25 chr20 39463931 39464330 -27203675 + LTR16A LTR ERVL 21 444 -6 2657 294 63 42 chr20 39464336 39465615 -27202390 + HERV16 LTR ERVL 1 1306 -3690 1319 288 34 55 chr20 39465621 39466053 -27201952 + HERV16 LTR ERVL 1517 1924 -3072 2276 92 3 0 chr20 39466053 39466359 -27201646 + AluY SINE Alu 5 311 0 1319 288 34 55 chr20 39466359 39466606 -27201399 + HERV16 LTR ERVL 1924 2175 -2821 341 298 65 33 chr20 39467361 39467575 -27200430 - MIR SINE MIR -39 223 4 1427 179 4 8 chr20 39468370 39468638 -27199367 + MER66B LTR ERV1 1 267 -219 269 278 113 26 chr20 39468665 39468816 -27199189 + L1ME LINE L1 5674 5837 -333 912 273 52 9 chr20 39468836 39469166 -27198839 + L1ME3 LINE L1 5795 6138 -24 261 0 0 0 chr20 39469415 39469444 -27198561 + (TG)n Simple_repeat Simple_repeat 2 30 0 248 200 360 0 chr20 39470835 39470935 -27197070 - MIR SINE MIR -8 254 119 414 333 0 7 chr20 39471330 39471468 -27196537 + MIR SINE MIR 121 257 -5 508 307 8 0 chr20 39471519 39471646 -27196359 - MIR SINE MIR -117 145 18 581 185 206 7 chr20 39474004 39474150 -27193855 - MER58C DNA MER1_type -1 214 40 3239 167 51 32 chr20 39474158 39474870 -27193135 + L1MB5 LINE L1 5443 6167 -7 1907 153 10 0 chr20 39475024 39475312 -27192693 + AluSq SINE Alu 1 291 -22 355 98 0 0 chr20 39475315 39475366 -27192639 + MER3 DNA MER1_type 155 205 -4 514 343 69 53 chr20 39475430 39476122 -27191883 + HAL1b LINE L1 178 802 -546 373 328 102 0 chr20 39476796 39477052 -27190953 + L1M4 LINE L1 2132 2413 -3733 22 35 0 0 chr20 39477133 39477162 -27190843 + AT_rich Low_complexity Low_complexity 1 29 0 277 301 27 7 chr20 39477267 39477413 -27190592 + L1M4 LINE L1 2650 2798 -3348 1972 110 0 0 chr20 39477829 39478101 -27189904 - AluSx SINE Alu -7 305 34 2095 127 3 0 chr20 39478182 39478473 -27189532 + AluSx SINE Alu 3 294 -18 257 234 109 0 chr20 39478712 39478776 -27189229 + L2 LINE L2 3242 3312 -1 568 100 0 0 chr20 39479507 39479587 -27188418 - MADE1 DNA Mariner 0 80 1 491 145 0 65 chr20 39479784 39479908 -27188097 + MER96B DNA MER1_type? 194 309 -108 291 316 98 17 chr20 39480436 39480610 -27187395 - MIR SINE MIR -16 246 59 201 291 61 54 chr20 39480609 39480757 -27187248 - L2 LINE L2 -518 2796 2648 * 460 282 14 62 chr20 39480896 39481105 -27186900 + MIR SINE MIR 8 206 -56 329 326 90 30 chr20 39481824 39482057 -27185948 - L2 LINE L2 0 3313 3067 885 197 17 93 chr20 39482170 39482201 -27185804 - L1MD3 LINE L1 0 7995 7963 2212 124 0 3 chr20 39482201 39482508 -27185497 - AluSx SINE Alu -6 306 1 885 197 17 93 chr20 39482508 39482765 -27185240 - L1MD3 LINE L1 -32 7963 7729 1128 240 103 34 chr20 39484579 39485016 -27182989 + MLT1C LTR MaLR 1 467 0 225 241 0 17 chr20 39485061 39485119 -27182886 + (TG)n Simple_repeat Simple_repeat 2 58 0 246 221 52 39 chr20 39485345 39485422 -27182583 - L2 LINE L2 -13 3259 3182 504 273 45 0 chr20 39485659 39485813 -27182192 + LTR16A LTR ERVL 285 445 -5 254 284 74 21 chr20 39486652 39486747 -27181258 + L2 LINE L2 3150 3249 -23 624 285 26 66 chr20 39487202 39487430 -27180575 + MIR SINE MIR 11 229 -33 285 271 0 0 chr20 39487453 39487523 -27180482 - MER96B DNA MER1_type? -105 70 1 400 193 96 0 chr20 39487625 39487708 -27180297 + MER58A DNA MER1_type 1 91 -16 341 274 14 127 chr20 39488863 39489075 -27178930 + MER5A DNA MER1_type 2 189 0 238 135 0 0 chr20 39489746 39489783 -27178222 - MLT2B2 LTR ERVL -4 511 475 662 115 4 59 chr20 39489802 39490086 -27177919 + (TA)n Simple_repeat Simple_repeat 1 268 0 235 167 0 0 chr20 39490120 39490162 -27177843 + MLT2C2 LTR ERVL 420 461 -3 384 136 48 10 chr20 39490202 39490305 -27177700 + (TA)n Simple_repeat Simple_repeat 2 108 0 2290 140 15 68 chr20 39490310 39490902 -27177103 - L1M2c LINE L1 -4598 2191 1631 201 39 0 0 chr20 39490902 39490928 -27177077 + (TC)n Simple_repeat Simple_repeat 2 27 0 2234 161 18 43 chr20 39490951 39491392 -27176613 - LTR3 LTR ERVK -2 430 1 246 301 128 0 chr20 39491395 39491528 -27176477 - LTR16A LTR ERVL -197 253 104 1978 174 3 26 chr20 39491632 39491977 -27176028 - MER1B DNA MER1_type 0 337 1 220 356 11 0 chr20 39493518 39493608 -27174397 + MIR SINE MIR 172 262 0 255 228 49 65 chr20 39494117 39494240 -27173765 + L1ME LINE L1 5776 5896 -225 772 277 30 17 chr20 39494671 39494902 -27173103 + MIR SINE MIR 19 252 -10 180 0 0 0 chr20 39494909 39494929 -27173076 + (CAT)n Simple_repeat Simple_repeat 2 21 0 1930 174 156 5 chr20 39495095 39495532 -27172473 + MLT1D LTR MaLR 1 503 -2 182 308 0 0 chr20 39495875 39495927 -27172078 - MER5A DNA MER1_type -10 179 128 2377 255 35 25 chr20 39495929 39496236 -27171769 + L1ME1 LINE L1 5391 5693 -641 2219 128 0 0 chr20 39496236 39496541 -27171464 + AluSx SINE Alu 1 305 -7 2377 255 35 25 chr20 39496541 39497010 -27170995 + L1ME1 LINE L1 5693 6334 0 257 229 60 12 chr20 39497017 39497100 -27170905 - MER5A DNA MER1_type -77 112 26 188 222 0 0 chr20 39498281 39498317 -27169688 + L2 LINE L2 3264 3299 -14 287 304 73 45 chr20 39501760 39502142 -27165863 + HAL1b LINE L1 150 542 -806 669 112 0 35 chr20 39502657 39502773 -27165232 - L1MA3 LINE L1 0 6305 6194 232 323 113 4 chr20 39502798 39503284 -27164721 - L1M4 LINE L1 -1497 4649 4111 236 200 17 0 chr20 39503436 39503496 -27164509 + GA-rich Low_complexity Low_complexity 3 63 0 242 247 0 55 chr20 39503496 39503569 -27164436 + G-rich Low_complexity Low_complexity 1 69 0 186 118 0 0 chr20 39503582 39503616 -27164389 + (T)n Simple_repeat Simple_repeat 1 34 0 7720 19 6 0 chr20 39503617 39504720 -27163285 - L1PA3 LINE L1 -1 6154 5050 10312 30 0 0 chr20 39504720 39506002 -27162003 + L1PA3 LINE L1 3759 5040 -1106 340 355 34 28 chr20 39506011 39506418 -27161587 + L2 LINE L2 2632 3035 -237 1777 188 29 5 chr20 39506470 39506847 -27161158 - L1MB5 LINE L1 -1 6173 5788 333 228 0 0 chr20 39506847 39506926 -27161079 + (TATATG)n Simple_repeat Simple_repeat 2 80 0 779 166 0 7 chr20 39506927 39507072 -27160933 - L1MB5 LINE L1 -388 5792 5649 283 292 83 49 chr20 39507132 39507276 -27160729 + L2 LINE L2 3165 3313 0 270 243 40 34 chr20 39507896 39508044 -27159961 + (TCTCTG)n Simple_repeat Simple_repeat 4 152 0 268 353 111 25 chr20 39508473 39508870 -27159135 - L2 LINE L2 -24 3248 2818 462 246 91 45 chr20 39508955 39509154 -27158851 + MER3 DNA MER1_type 1 208 -1 432 308 70 29 chr20 39509786 39510299 -27157706 + L1ME LINE L1 4613 5146 -1000 400 290 95 42 chr20 39510336 39510877 -27157128 + L1ME LINE L1 5236 5812 -350 443 280 24 85 chr20 39511129 39511340 -27156665 - MIR SINE MIR 0 262 65 285 327 42 14 chr20 39512127 39512341 -27155664 + MARNA DNA Mariner 341 560 -26 469 226 35 17 chr20 39512523 39512638 -27155367 + L2 LINE L2 3195 3311 -2 207 0 0 0 chr20 39513067 39513090 -27154915 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 307 355 45 0 chr20 39513201 39513311 -27154694 + L2 LINE L2 3157 3271 -1 329 239 92 37 chr20 39513414 39513523 -27154482 + MIR SINE MIR 23 137 -125 649 300 91 9 chr20 39513629 39513849 -27154156 + MIR SINE MIR 13 250 -12 957 211 139 20 chr20 39514009 39514480 -27153525 - MLT1E LTR MaLR -7 586 1 368 274 0 19 chr20 39514480 39514586 -27153419 + L2 LINE L2 3169 3272 0 198 0 0 0 chr20 39514616 39514638 -27153367 + (TG)n Simple_repeat Simple_repeat 2 23 0 22 0 0 0 chr20 39515057 39515079 -27152926 + AT_rich Low_complexity Low_complexity 1 22 0 302 326 50 28 chr20 39516324 39516465 -27151540 - L2 LINE L2 -246 3026 2883 525 234 0 0 chr20 39516468 39516605 -27151400 + (TG)n Simple_repeat Simple_repeat 1 137 0 1203 301 126 52 chr20 39517475 39518697 -27149308 + L2 LINE L2 1204 2516 -798 482 280 71 78 chr20 39519286 39519682 -27148323 - LTR16A LTR ERVL -40 410 18 660 78 33 44 chr20 39519985 39520165 -27147840 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 1157 23 35 11 chr20 39520177 39520351 -27147654 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 887 226 39 34 chr20 39520798 39521002 -27147003 - MER63A DNA MER1_type -5 205 1 664 252 68 24 chr20 39522327 39522533 -27145472 - MIR SINE MIR -1 261 47 351 0 0 0 chr20 39522867 39522906 -27145099 + (CA)n Simple_repeat Simple_repeat 2 40 0 3529 139 18 29 chr20 39523310 39523923 -27144082 - L1MB3 LINE L1 0 6183 5578 634 252 99 21 chr20 39524704 39524946 -27143059 - LTR16C LTR ERVL 0 491 231 1095 292 77 6 chr20 39525685 39526038 -27141967 - LTR16A LTR ERVL -5 445 68 197 304 72 56 chr20 39526395 39526520 -27141485 + MER5A DNA MER1_type 63 189 0 231 319 56 38 chr20 39526765 39526925 -27141080 - MIR SINE MIR -11 251 89 903 235 36 36 chr20 39527035 39527282 -27140723 - MLT1K LTR MaLR -10 578 332 212 295 83 41 chr20 39527627 39527786 -27140219 - MIR SINE MIR -37 225 20 10666 109 1 2 chr20 39528636 39530878 -27137127 + L1PA8A LINE L1 3883 6130 -1 536 309 44 17 chr20 39531483 39531664 -27136341 - MER117 DNA MER1_type 0 197 12 220 370 72 22 chr20 39532568 39532706 -27135299 + MIR SINE MIR 1 145 -117 261 332 166 59 chr20 39533125 39533498 -27134507 - L3 LINE CR1 -7 1570 1158 490 268 9 114 chr20 39533518 39533746 -27134259 + MIR SINE MIR 59 262 0 418 320 55 71 chr20 39533847 39534285 -27133720 + L2 LINE L2 2805 3235 -78 219 286 0 0 chr20 39534425 39534474 -27133531 + (TCCA)n Simple_repeat Simple_repeat 2 50 0 258 291 0 0 chr20 39534477 39534556 -27133449 - L1MC4 LINE L1 -138 7904 7826 1978 228 30 22 chr20 39534598 39535098 -27132907 - L1ME2 LINE L1 -10 6154 5651 562 234 89 0 chr20 39535099 39535257 -27132748 - L1ME LINE L1 -435 5729 5558 229 229 72 36 chr20 39535263 39535346 -27132659 + L2 LINE L2 3224 3309 -4 210 289 44 74 chr20 39535378 39535513 -27132492 + MIR SINE MIR 52 182 -80 198 0 0 0 chr20 39536448 39536470 -27131535 + (CA)n Simple_repeat Simple_repeat 2 23 0 310 326 28 7 chr20 39536715 39536856 -27131149 - MIR SINE MIR -2 260 117 998 203 141 8 chr20 39537133 39537261 -27130744 - AluJo SINE Alu -37 275 165 456 104 0 0 chr20 39537261 39537328 -27130677 + (TA)n Simple_repeat Simple_repeat 1 67 0 * 465 34 0 0 chr20 39537327 39537386 -27130619 + (GA)n Simple_repeat Simple_repeat 2 60 0 998 203 141 8 chr20 39537328 39537498 -27130507 - AluJo SINE Alu -147 165 3 2080 146 0 0 chr20 39537522 39537831 -27130174 - AluSx SINE Alu -3 309 1 816 187 0 0 chr20 39537844 39537967 -27130038 - FLAM_C SINE Alu -8 125 3 1107 179 15 102 chr20 39537968 39538293 -27129712 - MER33 DNA MER1_type -37 287 1 702 256 32 62 chr20 39538477 39538785 -27129220 + MER113 DNA MER1_type? 1 299 -222 366 293 78 31 chr20 39538810 39539001 -27129004 + L1ME1 LINE L1 32 231 -6165 * 463 267 30 0 chr20 39538999 39539130 -27128875 + L1MEc LINE L1 622 756 -5640 2973 240 113 18 chr20 39539138 39540053 -27127952 + L1ME1 LINE L1 233 1234 -5162 706 231 26 0 chr20 39540065 39540221 -27127784 + L1ME1 LINE L1 3676 3835 -2380 202 191 45 22 chr20 39540258 39540347 -27127658 + (TA)n Simple_repeat Simple_repeat 1 91 0 309 169 0 0 chr20 39540371 39540430 -27127575 + (CA)n Simple_repeat Simple_repeat 2 60 0 1910 243 57 4 chr20 39540436 39540946 -27127059 + L1ME1 LINE L1 3865 4401 -1814 591 238 37 23 chr20 39540946 39541160 -27126845 + L1ME1 LINE L1 5087 5303 -912 574 222 25 0 chr20 39541158 39541291 -27126714 - L1M LINE L1 -740 5411 5272 * 209 161 0 0 chr20 39541293 39541324 -27126681 + polypyrimidine Low_complexity Low_complexity 2 32 0 2195 114 0 22 chr20 39541388 39541705 -27126300 + AluSg SINE Alu 1 310 0 1773 239 47 4 chr20 39541706 39542157 -27125848 + L1ME1 LINE L1 5486 5955 -280 1566 151 62 39 chr20 39542187 39542492 -27125513 + AluJb SINE Alu 1 312 0 2053 132 58 28 chr20 39542609 39542973 -27125032 + THE1C LTR MaLR 1 375 0 209 317 70 54 chr20 39543159 39543345 -27124660 + L2 LINE L2 3100 3288 -25 1510 327 27 45 chr20 39544361 39544415 -27123590 + ERVL LTR ERVL 3773 3826 -1938 1931 174 20 64 chr20 39544415 39544822 -27123183 - MLT1B LTR MaLR -1 389 1 1510 327 27 45 chr20 39544822 39545589 -27122416 + ERVL LTR ERVL 3826 4579 -1185 386 343 7 0 chr20 39545602 39545739 -27122266 + LTR16B LTR ERVL 240 377 -87 28 48 0 0 chr20 39546285 39546327 -27121678 + AT_rich Low_complexity Low_complexity 1 42 0 21 71 0 0 chr20 39546600 39546642 -27121363 + AT_rich Low_complexity Low_complexity 1 42 0 229 243 37 140 chr20 39547382 39547518 -27120487 - MIR SINE MIR -62 200 79 199 261 14 43 chr20 39547868 39547937 -27120068 + L2 LINE L2 3204 3270 -2 21 57 0 0 chr20 39548872 39548907 -27119098 + AT_rich Low_complexity Low_complexity 1 35 0 1701 234 11 11 chr20 39548942 39549305 -27118700 + MLT1A1 LTR MaLR 1 363 -2 238 265 53 45 chr20 39549732 39549864 -27118141 - LTR16C LTR ERVL -2 489 357 236 331 38 45 chr20 39550497 39550630 -27117375 - MER5B DNA MER1_type 0 178 47 212 258 16 0 chr20 39550723 39550785 -27117220 + (TTCA)n Simple_repeat Simple_repeat 2 64 0 437 292 90 6 chr20 39550928 39551106 -27116899 - MIR SINE MIR -10 252 60 378 234 200 14 chr20 39551297 39551442 -27116563 - MER5B DNA MER1_type 0 178 7 338 340 168 19 chr20 39551877 39552139 -27115866 - L2 LINE L2 -1 3271 2971 321 358 122 11 chr20 39552539 39552818 -27115187 + L3 LINE CR1 1073 1382 -195 457 271 0 0 chr20 39553036 39553132 -27114873 - MER58A DNA MER1_type -11 96 1 184 296 0 0 chr20 39553134 39553178 -27114827 + L3 LINE CR1 1421 1464 -113 2101 111 0 0 chr20 39554703 39555150 -27112855 - AluSc SINE Alu 0 447 1 228 276 71 63 chr20 39555200 39555327 -27112678 - MIR SINE MIR -93 169 42 809 224 6 22 chr20 39555798 39555977 -27112028 + LTR28 LTR ERV1 1 176 -844 304 181 14 14 chr20 39556003 39556075 -27111930 + LTR1 LTR ERV1 121 192 -593 * 832 217 75 101 chr20 39556042 39556388 -27111617 + LTR27 LTR ERV1 300 636 0 256 258 130 69 chr20 39556469 39556620 -27111385 - MIR SINE MIR -63 145 1 213 292 28 14 chr20 39556802 39556874 -27111131 + L2 LINE L2 3191 3263 -9 816 186 14 7 chr20 39557764 39557909 -27110096 - MER5A DNA MER1_type -42 147 2 24 0 0 0 chr20 39558237 39558261 -27109744 + AT_rich Low_complexity Low_complexity 1 24 0 223 360 122 7 chr20 39559050 39559197 -27108808 - L2 LINE L2 0 3272 3109 1868 195 33 26 chr20 39559426 39559850 -27108155 + MLT1C LTR MaLR 9 435 -32 2116 183 56 3 chr20 39559850 39560227 -27107778 + MER6 DNA MER2_type 1 397 -468 2068 128 3 0 chr20 39560228 39560518 -27107487 + AluSp SINE Alu 1 291 -22 306 220 0 0 chr20 39560520 39560579 -27107426 + MER6 DNA MER2_type 807 865 0 509 294 91 29 chr20 39561061 39561435 -27106570 + L1ME4a LINE L1 5519 5915 -206 1678 173 0 30 chr20 39561554 39561855 -27106150 - AluJo SINE Alu -8 304 13 729 186 175 11 chr20 39562040 39562223 -27105782 + MER58A DNA MER1_type 12 224 0 1891 148 4 4 chr20 39562435 39562735 -27105270 - AluSx SINE Alu 0 305 6 405 70 0 0 chr20 39563317 39563374 -27104631 + (TTCA)n Simple_repeat Simple_repeat 3 59 0 29 0 0 0 chr20 39563506 39563535 -27104470 + AT_rich Low_complexity Low_complexity 1 29 0 682 286 54 21 chr20 39563589 39563830 -27104175 - MIR SINE MIR -2 260 12 1758 174 67 82 chr20 39564049 39564514 -27103491 - MER31B LTR ERV1 0 466 9 260 288 65 72 chr20 39564774 39564913 -27103092 + MER5A DNA MER1_type 7 144 -45 192 239 125 23 chr20 39565605 39565693 -27102312 - MIR3 SINE MIR -108 100 4 465 327 67 26 chr20 39566025 39566294 -27101711 + L2 LINE L2 2474 2753 -561 306 322 30 89 chr20 39566404 39566640 -27101365 + L2 LINE L2 2965 3186 -86 485 309 7 0 chr20 39567325 39567461 -27100544 + MIR SINE MIR 107 243 -19 3507 170 91 27 chr20 39567521 39568304 -27099701 - LTR1B LTR ERV1 -7 819 8 1828 127 33 0 chr20 39568460 39568736 -27099269 + L1PB3 LINE L1 5870 6154 0 316 298 79 54 chr20 39569117 39569157 -27098848 - L1ME LINE L1 -292 5829 5791 180 0 0 0 chr20 39569157 39569177 -27098828 + (TA)n Simple_repeat Simple_repeat 1 20 0 316 298 79 54 chr20 39569177 39569542 -27098463 - L1ME LINE L1 -330 5791 5414 408 279 14 61 chr20 39569975 39570122 -27097883 - L2 LINE L2 0 3272 3133 234 271 146 0 chr20 39570151 39570247 -27097758 + L2 LINE L2 2863 2972 -300 780 279 116 41 chr20 39570944 39571306 -27096699 + L2 LINE L2 2924 3312 -1 1043 207 0 6 chr20 39572692 39572866 -27095139 + FAM SINE Alu 1 173 -2 992 266 44 52 chr20 39572895 39573279 -27094726 + L1ME3A LINE L1 5742 6122 -48 1107 123 0 0 chr20 39575257 39575412 -27092593 + LTR8A LTR ERV1 1 155 -572 1606 107 0 13 chr20 39575412 39575637 -27092368 - AluSp SINE Alu -7 306 85 302 0 26 0 chr20 39575704 39575742 -27092263 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 26 50 0 0 chr20 39576527 39576567 -27091438 + AT_rich Low_complexity Low_complexity 1 40 0 24 32 0 0 chr20 39576612 39576643 -27091362 + AT_rich Low_complexity Low_complexity 1 31 0 1287 159 130 25 chr20 39576675 39576951 -27091054 - AluJo SINE Alu -7 305 1 2157 92 0 0 chr20 39576996 39577268 -27090737 + AluSq SINE Alu 30 301 -12 186 133 0 0 chr20 39577273 39577303 -27090702 + (GAAA)n Simple_repeat Simple_repeat 1 30 0 226 273 85 30 chr20 39577722 39577887 -27090118 + L1ME4a LINE L1 5711 5884 -237 288 287 78 6 chr20 39577970 39578137 -27089868 + L1ME4a LINE L1 5936 6114 -7 314 263 12 0 chr20 39578404 39578484 -27089521 + MIR SINE MIR 163 243 -19 299 354 102 19 chr20 39578484 39578699 -27089306 + MIR SINE MIR 16 248 -14 228 361 14 0 chr20 39579159 39579231 -27088774 + L2 LINE L2 3125 3197 -75 327 189 0 0 chr20 39579260 39579332 -27088673 + CT-rich Low_complexity Low_complexity 2 76 -20 219 103 0 0 chr20 39579332 39579371 -27088634 + (TATG)n Simple_repeat Simple_repeat 2 40 0 327 189 0 0 chr20 39579371 39579393 -27088612 + CT-rich Low_complexity Low_complexity 75 96 0 450 284 42 72 chr20 39579410 39579674 -27088331 - L2 LINE L2 -38 3275 3020 1058 243 19 13 chr20 39580200 39580606 -27087399 - MLT1B LTR MaLR 0 390 3 440 309 180 0 chr20 39581798 39582015 -27085990 + L3 LINE CR1 1072 1327 -250 741 41 41 8 chr20 39582169 39582292 -27085713 + (TCTA)n Simple_repeat Simple_repeat 2 128 0 182 212 61 61 chr20 39582756 39582822 -27085183 + L2 LINE L2 3162 3227 -86 273 368 70 10 chr20 39583140 39583341 -27084664 - MIR SINE MIR -49 213 1 1138 254 48 14 chr20 39583393 39583688 -27084317 - MLT1F1 LTR MaLR 0 567 263 413 324 76 0 chr20 39583684 39583829 -27084176 - MLT1F1 LTR MaLR -435 158 3 * 365 236 38 28 chr20 39584168 39584274 -27083731 + MER21B LTR ERV1 1 107 -756 336 271 0 0 chr20 39584271 39584341 -27083664 + MER21B LTR ERV1 19 88 -775 * 3733 212 52 16 chr20 39584345 39585137 -27082868 + MER21B LTR ERV1 43 862 -1 247 151 0 94 chr20 39586769 39586822 -27081183 + MER21B LTR ERV1 239 286 -577 1605 189 31 48 chr20 39586846 39586985 -27081020 - Zaphod DNA AcHobo -27 4004 3864 2105 113 0 35 chr20 39586985 39587303 -27080702 + AluSc SINE Alu 1 307 -2 1605 189 31 48 chr20 39587303 39587580 -27080425 - Zaphod DNA AcHobo -167 3864 3595 * 2297 205 71 80 chr20 39587578 39588411 -27079594 - Zaphod DNA AcHobo -3041 990 166 3504 129 143 133 chr20 39588454 39589016 -27078989 - L1MC3 LINE L1 0 7785 7116 230 280 43 11 chr20 39589016 39589109 -27078896 - MLT1F1 LTR MaLR -437 130 35 3504 129 143 133 chr20 39589109 39589471 -27078534 - L1MC3 LINE L1 -669 7116 6759 406 233 19 19 chr20 39589586 39589689 -27078316 + MIR SINE MIR 160 262 0 1733 166 79 18 chr20 39589971 39590314 -27077691 - THE1C LTR MaLR -11 364 1 24 32 0 0 chr20 39590667 39590698 -27077307 + AT_rich Low_complexity Low_complexity 1 31 0 945 265 40 0 chr20 39590885 39591108 -27076897 + MIR SINE MIR 10 241 -21 505 252 52 7 chr20 39591466 39591601 -27076404 + MIR SINE MIR 39 179 -83 399 21 0 0 chr20 39592405 39592453 -27075552 + (T)n Simple_repeat Simple_repeat 1 48 0 848 211 111 58 chr20 39592555 39592763 -27075242 + MER20 DNA MER1_type 1 219 0 549 139 0 0 chr20 39592783 39592862 -27075143 + MADE1 DNA Mariner 1 79 -1 374 216 86 9 chr20 39593010 39593126 -27074879 + MIR SINE MIR 98 222 -40 526 225 96 45 chr20 39593928 39594106 -27073899 + MIR SINE MIR 57 243 -19 184 204 93 56 chr20 39594073 39594127 -27073878 + L2 LINE L2 3251 3306 -7 * 891 305 53 76 chr20 39595876 39596351 -27071654 - LTR16B LTR ERVL 0 464 1 220 299 11 11 chr20 39596430 39596517 -27071488 + (CATATA)n Simple_repeat Simple_repeat 4 90 0 252 268 0 0 chr20 39596998 39597054 -27070951 - L2 LINE L2 0 3272 3217 237 326 87 14 chr20 39597275 39597413 -27070592 + MIR3 SINE MIR 37 184 -24 1347 178 163 31 chr20 39597595 39597853 -27070152 - AluJo SINE Alu -9 293 2 300 330 0 0 chr20 39597881 39597969 -27070036 + MIR SINE MIR 53 140 -122 323 269 84 17 chr20 39598903 39599022 -27068983 + MIR SINE MIR 29 155 -107 2662 114 11 19 chr20 39599740 39600118 -27067887 - THE1C LTR MaLR 0 375 1 227 187 0 0 chr20 39600745 39600795 -27067210 + MIR SINE MIR 104 152 -61 261 200 100 0 chr20 39600856 39600926 -27067079 + MIR SINE MIR 166 242 -20 2316 115 0 0 chr20 39601397 39601702 -27066303 - AluSc SINE Alu -4 305 1 29 60 0 0 chr20 39601988 39602038 -27065967 + AT_rich Low_complexity Low_complexity 1 50 0 188 176 0 0 chr20 39602059 39602093 -27065912 + L2 LINE L2 3272 3305 -8 339 273 0 26 chr20 39602101 39602178 -27065827 + MIR SINE MIR 14 88 -174 986 294 46 11 chr20 39602921 39603268 -27064737 - LTR16A LTR ERVL -5 445 87 548 328 17 0 chr20 39603530 39603704 -27064301 + MIR SINE MIR 6 182 -80 675 205 180 6 chr20 39604137 39604298 -27063707 + MER5A DNA MER1_type 1 189 0 929 181 12 6 chr20 39604307 39604473 -27063532 - MER58B DNA MER1_type -1 340 174 183 100 0 0 chr20 39604592 39604622 -27063383 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 344 324 139 23 chr20 39604643 39604902 -27063103 - L2 LINE L2 -25 3288 3000 462 294 184 0 chr20 39604939 39605102 -27062903 - MIR SINE MIR -67 195 3 296 404 37 0 chr20 39605193 39605302 -27062703 - L2 LINE L2 -26 3246 3134 6745 226 65 71 chr20 39605852 39606589 -27061416 + L1MD1 LINE L1 2330 3070 -3172 881 233 23 11 chr20 39606589 39606765 -27061240 + FRAM SINE Alu 1 170 -6 6745 226 65 71 chr20 39606765 39609532 -27058473 + L1MD1 LINE L1 3070 5974 -268 476 303 74 52 chr20 39609693 39610007 -27057998 + L1ME LINE L1 5332 5658 -463 2216 181 80 11 chr20 39610007 39610443 -27057562 - MLT1C LTR MaLR -1 466 1 476 303 74 52 chr20 39610443 39610534 -27057471 + L1ME LINE L1 5658 5746 -375 301 117 20 67 chr20 39610559 39610645 -27057360 - Alu SINE Alu -264 38 1 258 276 4 39 chr20 39610653 39610757 -27057248 + MIR SINE MIR 88 148 -60 59 46 0 0 chr20 39611128 39611215 -27056790 + AT_rich Low_complexity Low_complexity 1 87 0 349 301 28 28 chr20 39612485 39612628 -27055377 - MIR SINE MIR -6 256 114 496 108 0 27 chr20 39612704 39612778 -27055227 - MER3 DNA MER1_type -132 77 6 279 93 0 0 chr20 39613220 39613263 -27054742 + (TG)n Simple_repeat Simple_repeat 2 44 0 375 151 47 23 chr20 39613815 39613901 -27054104 - MER103 DNA DNA -31 135 48 640 72 0 0 chr20 39613901 39613984 -27054021 - L1PA4 LINE L1 -188 5967 5885 195 42 0 0 chr20 39613984 39614008 -27053997 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 231 182 0 0 chr20 39614009 39614053 -27053952 - MER103 DNA DNA -105 61 18 231 250 0 0 chr20 39614695 39614747 -27053258 + L1MA10 LINE L1 6269 6320 -14 259 327 44 44 chr20 39614793 39614952 -27053053 + L2 LINE L2 2932 3090 -182 195 0 39 0 chr20 39614963 39614989 -27053016 + (TTTG)n Simple_repeat Simple_repeat 2 112 0 2262 78 0 0 chr20 39614989 39615270 -27052735 - AluSc SINE Alu -1 306 1 228 254 167 32 chr20 39615647 39615773 -27052232 - MIR SINE MIR -53 209 67 243 292 15 0 chr20 39616032 39616097 -27051908 + GA-rich Low_complexity Low_complexity 6 71 0 1778 198 12 32 chr20 39616138 39616547 -27051458 + L1MA10 LINE L1 5921 6321 -13 657 249 68 27 chr20 39616562 39616900 -27051105 + L1MC5 LINE L1 7534 7885 -76 22 0 0 0 chr20 39616914 39616936 -27051069 + AT_rich Low_complexity Low_complexity 1 22 0 2318 115 0 3 chr20 39617089 39617394 -27050611 - AluSq SINE Alu -9 304 1 21 0 0 0 chr20 39617535 39617556 -27050449 + AT_rich Low_complexity Low_complexity 1 21 0 443 200 20 30 chr20 39619650 39619750 -27048255 - MER5B DNA MER1_type -5 173 75 219 249 103 103 chr20 39619756 39619941 -27048064 - L2 LINE L2 -1597 1717 1533 21 36 0 0 chr20 39620738 39620766 -27047239 + AT_rich Low_complexity Low_complexity 1 28 0 397 341 119 37 chr20 39621214 39621566 -27046439 + L3 LINE CR1 260 640 -937 205 170 19 75 chr20 39621603 39621656 -27046349 + L2 LINE L2 3261 3310 -3 213 115 327 0 chr20 39622622 39622674 -27045331 + MER5A DNA MER1_type 44 112 -77 367 181 0 21 chr20 39622812 39622906 -27045099 + G-rich Low_complexity Low_complexity 2 93 0 1592 184 35 17 chr20 39623224 39623347 -27044658 + AluJo SINE Alu 1 120 -192 423 0 0 0 chr20 39623347 39623394 -27044611 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 1592 184 35 17 chr20 39623394 39623558 -27044447 + AluJo SINE Alu 120 293 -19 202 339 54 18 chr20 39623612 39623668 -27044337 - L2 LINE L2 -88 3184 3127 185 290 152 65 chr20 39623755 39623986 -27044019 - L2 LINE L2 -213 3059 2809 195 318 106 20 chr20 39625140 39625291 -27042714 + L2 LINE L2 2226 2389 -925 185 281 263 9 chr20 39625468 39625582 -27042423 + L2 LINE L2 2831 2973 -299 1224 327 47 24 chr20 39626785 39627502 -27040503 - L2 LINE L2 0 3313 2577 226 286 100 113 chr20 39627542 39627912 -27040093 - L3 LINE CR1 -96 1481 1117 216 0 0 0 chr20 39628063 39628087 -27039918 + (TAG)n Simple_repeat Simple_repeat 1 24 0 946 9 0 9 chr20 39628817 39628932 -27039073 + AluYa5/8 SINE Alu 197 310 0 897 257 83 57 chr20 39629200 39629694 -27038311 + MLT1J LTR MaLR 3 509 -2 591 243 45 5 chr20 39630758 39630960 -27037045 + L1ME2 LINE L1 5677 5886 -278 1133 237 27 35 chr20 39631025 39631363 -27036642 - L1ME2 LINE L1 -281 5883 5549 5826 103 45 1 chr20 39631392 39632396 -27035609 - L1MA1 LINE L1 -101 6201 5155 476 242 75 0 chr20 39632397 39632517 -27035488 - L1ME2 LINE L1 -604 5560 5432 787 276 78 8 chr20 39632517 39632890 -27035115 - Charlie4a DNA MER1_type -70 438 40 370 326 28 39 chr20 39633176 39633354 -27034651 - MER5B DNA MER1_type -1 177 2 192 77 0 0 chr20 39634211 39634237 -27033768 + (TTG)n Simple_repeat Simple_repeat 2 27 0 54 29 0 0 chr20 39634413 39634481 -27033524 + AT_rich Low_complexity Low_complexity 1 68 0 250 290 86 37 chr20 39634559 39634721 -27033284 + MARNA DNA Mariner 25 194 -392 359 279 67 30 chr20 39635683 39635848 -27032157 + L2 LINE L2 3094 3264 -49 2133 122 10 7 chr20 39635902 39636198 -27031807 + AluSx SINE Alu 1 297 -15 182 259 37 62 chr20 39636290 39636371 -27031634 - L3 LINE CR1 -73 1504 1426 616 252 26 10 chr20 39637404 39637615 -27030390 - L1MD3 LINE L1 -19 7976 6137 319 296 0 12 chr20 39638640 39638721 -27029284 + MIR SINE MIR 13 92 -170 1661 197 77 22 chr20 39638734 39639150 -27028855 + MLT1C LTR MaLR 27 465 -2 1059 186 11 6 chr20 39639212 39639395 -27028610 + MER5A DNA MER1_type 1 184 -5 267 273 0 0 chr20 39639403 39639469 -27028536 + MIR SINE MIR 172 237 -25 2156 87 6 69 chr20 39639849 39640181 -27027824 + AluY SINE Alu 1 311 0 263 330 19 0 chr20 39640265 39640371 -27027634 + MIR SINE MIR 142 249 -13 3679 96 0 19 chr20 39640826 39641347 -27026658 + MER9 LTR ERVK 1 511 0 19914 65 16 24 chr20 39641347 39642158 -27025847 + HERVK9 LTR ERVK 1 817 -5099 185 228 0 88 chr20 39642158 39642215 -27025790 + MER5B DNA MER1_type 58 109 -69 19914 65 16 24 chr20 39642215 39644155 -27023850 + HERVK9 LTR ERVK 817 2786 -3130 14612 70 2 0 chr20 39644155 39646076 -27021929 + HERVK9 LTR ERVK 3711 5634 -282 2039 74 36 0 chr20 39646159 39646444 -27021561 + HERVK9 LTR ERVK 5635 5916 0 3680 109 0 8 chr20 39646444 39646959 -27021046 + MER9 LTR ERVK 1 511 0 608 306 84 10 chr20 39647157 39647454 -27020551 - MLT1J1 LTR MaLR -124 322 4 8284 174 35 9 chr20 39647813 39649399 -27018606 + MSTA-int LTR MaLR 25 1651 0 1832 167 63 61 chr20 39649399 39649825 -27018180 + MSTA LTR MaLR 1 427 -1 3200 254 63 16 chr20 39649846 39651364 -27016641 - L1ME LINE L1 -534 6427 4851 1304 274 40 12 chr20 39651537 39652201 -27015804 - L1ME LINE L1 -2327 4614 3931 24 0 0 0 chr20 39652209 39652233 -27015772 + AT_rich Low_complexity Low_complexity 1 24 0 1103 254 40 27 chr20 39652259 39652629 -27015376 + L1M4 LINE L1 3932 4306 -1840 1376 244 25 23 chr20 39652631 39653062 -27014943 - MLT1C LTR MaLR -2 465 34 1497 216 17 72 chr20 39653089 39653506 -27014499 - MLT1C-int LTR MaLR -15 1356 963 4271 196 79 48 chr20 39653612 39654584 -27013421 + L1MC3 LINE L1 5871 6890 -895 239 53 0 26 chr20 39654584 39654622 -27013383 + (CAAA)n Simple_repeat Simple_repeat 3 39 0 4271 196 79 48 chr20 39654622 39654864 -27013141 + L1MC3 LINE L1 6890 7123 -662 1556 163 32 73 chr20 39654878 39655247 -27012758 + MLT1B LTR MaLR 27 380 -10 759 260 49 77 chr20 39655323 39655754 -27012251 - L1ME LINE L1 -5955 468 50 311 301 51 64 chr20 39656136 39656292 -27011713 + MIR SINE MIR 15 168 -94 206 318 0 0 chr20 39657005 39657068 -27010937 + C-rich Low_complexity Low_complexity 6 68 0 297 280 173 27 chr20 39657470 39657620 -27010385 - MIR SINE MIR -45 217 46 2178 106 40 7 chr20 39658027 39658330 -27009675 + AluSq SINE Alu 1 313 0 303 188 32 204 chr20 39659053 39659239 -27008766 + MIR3 SINE MIR 7 160 -48 379 319 0 0 chr20 39659239 39659352 -27008653 - MER117 DNA MER1_type 0 197 85 9726 25 0 0 chr20 39660126 39662041 -27005964 - L1PA2 LINE L1 -5 6150 4236 1242 33 0 0 chr20 39662041 39662192 -27005813 + L1PA2 LINE L1 4096 4246 -1900 223 282 130 69 chr20 39662583 39662714 -27005291 + MIR3 SINE MIR 3 141 -67 1855 142 3 7 chr20 39664041 39664349 -27003656 - AluSx SINE Alu 0 307 1 226 178 10 168 chr20 39666267 39666368 -27001637 - L2 LINE L2 0 3272 3188 1772 181 3 48 chr20 39666780 39667133 -27000872 + MER1B DNA MER1_type 1 337 0 3841 241 57 12 chr20 39667290 39669564 -26998441 - L1 LINE L1 -3215 4350 1969 905 364 15 13 chr20 39669664 39670120 -26997885 - L1 LINE L1 -5823 1673 1217 2221 118 3 3 chr20 39670355 39670651 -26997354 - AluSc SINE Alu -13 296 1 1348 212 16 0 chr20 39670695 39670828 -26997177 + MER33 DNA MER1_type 4 133 -2452 2293 98 3 0 chr20 39670828 39671125 -26996880 + AluSg SINE Alu 1 298 -12 1348 212 16 0 chr20 39671125 39671307 -26996698 + MER33 DNA MER1_type 133 324 0 201 341 33 22 chr20 39671403 39671494 -26996511 - L2 LINE L2 -15 3257 3166 401 276 0 9 chr20 39671770 39671886 -26996119 + MER103 DNA DNA 4 118 -48 547 252 130 21 chr20 39672095 39672569 -26995436 + LTR50 LTR ERVL 55 696 -99 185 128 0 26 chr20 39673246 39673285 -26994720 + (TG)n Simple_repeat Simple_repeat 1 38 0 186 321 57 19 chr20 39673330 39673383 -26994622 + L2 LINE L2 3193 3247 -25 198 118 0 0 chr20 39673394 39673428 -26994577 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 1142 182 49 7 chr20 39673493 39673779 -26994226 - MER33 DNA MER1_type 0 324 27 367 336 0 8 chr20 39674988 39675116 -26992889 + MIR SINE MIR 20 146 -62 194 376 113 15 chr20 39675609 39675742 -26992263 - L2 LINE L2 0 3272 3127 349 361 0 0 chr20 39676419 39676552 -26991453 + LTR33 LTR ERVL 4 136 -385 541 287 10 35 chr20 39676687 39676889 -26991116 + LTR33 LTR ERVL 323 519 -2 195 42 0 0 chr20 39677354 39677378 -26990627 + (GAAA)n Simple_repeat Simple_repeat 2 25 0 189 0 0 0 chr20 39677388 39677409 -26990596 + (A)n Simple_repeat Simple_repeat 1 21 0 194 273 102 34 chr20 39677522 39677610 -26990395 - L2 LINE L2 -2823 491 398 316 296 133 15 chr20 39677682 39677836 -26990169 + MIR SINE MIR 16 191 -64 231 250 44 0 chr20 39677892 39677960 -26990045 + CT-rich Low_complexity Low_complexity 2 72 0 258 268 28 0 chr20 39677996 39678067 -26989938 + (TTG)n Simple_repeat Simple_repeat 3 75 0 1868 136 0 34 chr20 39678070 39678384 -26989621 - AluSx SINE Alu 0 304 1 253 218 109 69 chr20 39679106 39679207 -26988798 - MIR SINE MIR -101 161 57 181 111 0 0 chr20 39679939 39679966 -26988039 - L2 LINE L2 -2 3270 3244 590 299 99 15 chr20 39679972 39680173 -26987832 + MIR SINE MIR 13 230 -32 836 200 64 4 chr20 39680942 39681177 -26986828 - L1MD3 LINE L1 -3 7992 7744 1843 220 31 21 chr20 39681209 39681631 -26986374 - MSTB LTR MaLR 0 426 1 518 298 105 0 chr20 39681874 39682055 -26985950 - MIR SINE MIR -22 240 41 1835 158 0 35 chr20 39682358 39682669 -26985336 + AluJb SINE Alu 1 300 -12 228 278 0 0 chr20 39683061 39683115 -26984890 - L2 LINE L2 0 3272 3219 1464 204 70 82 chr20 39683688 39683913 -26984092 - L1MCb LINE L1 -3135 3429 3203 2151 105 0 49 chr20 39683913 39684219 -26983786 + AluSg SINE Alu 3 293 -17 1464 204 70 82 chr20 39684219 39684508 -26983497 - L1MCb LINE L1 -3361 3203 2912 2095 148 3 0 chr20 39684508 39684818 -26983187 - AluSx SINE Alu -1 311 1 1464 204 70 82 chr20 39684818 39684868 -26983137 - L1MCb LINE L1 -3652 2912 2863 2684 88 6 0 chr20 39684868 39685221 -26982784 + THE1A LTR MaLR 1 355 0 1464 204 70 82 chr20 39685221 39685359 -26982646 - L1MCb LINE L1 -3701 2863 2734 330 172 23 23 chr20 39685354 39685441 -26982564 - L1MC3 LINE L1 0 7785 7699 * 288 228 98 22 chr20 39685442 39685534 -26982471 + MLT1C LTR MaLR 2 100 -367 1174 194 145 18 chr20 39685534 39685935 -26982070 - L1MCb LINE L1 -4234 2330 1879 2221 235 28 14 chr20 39685937 39686516 -26981489 - L1MB5 LINE L1 -2 6172 5586 3588 224 72 138 chr20 39686516 39688272 -26979733 - L1MCb LINE L1 -4761 1803 1 1549 237 48 54 chr20 39688268 39688751 -26979254 - L1MEc LINE L1 -3960 2436 1956 * 1978 128 0 4 chr20 39688751 39689064 -26978941 - AluSg SINE Alu 0 321 10 1549 237 48 54 chr20 39689064 39689250 -26978755 - L1MEc LINE L1 -4440 1956 1770 1600 219 57 63 chr20 39689258 39689766 -26978239 + MLT1D LTR MaLR 1 505 0 663 226 42 15 chr20 39689768 39690005 -26978000 + MER106B DNA MER1_type 2 1059 0 1013 284 95 25 chr20 39690029 39691090 -26976915 - L1MEc LINE L1 -4513 1702 600 391 230 28 22 chr20 39692039 39692217 -26975788 + (TA)n Simple_repeat Simple_repeat 2 180 0 304 195 45 10 chr20 39692255 39692551 -26975454 + (TA)n Simple_repeat Simple_repeat 1 306 0 228 298 48 19 chr20 39692681 39692768 -26975237 + MLT1K LTR MaLR 447 536 -52 1326 289 28 11 chr20 39692768 39693225 -26974780 - LTR16C LTR ERVL 0 491 27 304 386 18 0 chr20 39694273 39694387 -26973618 - L2 LINE L2 -20 3252 3137 336 247 62 41 chr20 39694415 39694512 -26973493 + MIR SINE MIR 98 196 -66 487 295 13 0 chr20 39695456 39695605 -26972400 - MIR SINE MIR 0 262 112 515 113 0 0 chr20 39695890 39695970 -26972035 + MADE1 DNA Mariner 1 80 0 1982 247 89 4 chr20 39696357 39696896 -26971109 + MLT1E LTR MaLR 1 585 -8 473 294 72 13 chr20 39697328 39697481 -26970524 - MIR SINE MIR -53 209 48 245 310 60 10 chr20 39698407 39698507 -26969498 + L2 LINE L2 3168 3272 0 287 250 250 10 chr20 39699435 39699539 -26968466 + MIR SINE MIR 61 189 -73 239 318 36 42 chr20 39699603 39700050 -26967955 + L1ME LINE L1 4370 4813 -1333 225 0 0 0 chr20 39700091 39700116 -26967889 + (TA)n Simple_repeat Simple_repeat 2 26 0 413 328 149 15 chr20 39700160 39700706 -26967299 + L1ME LINE L1 4903 5518 -646 38 22 0 0 chr20 39700721 39700766 -26967239 + AT_rich Low_complexity Low_complexity 1 45 0 7741 16 0 0 chr20 39700834 39702179 -26965826 - L1PA3 LINE L1 0 6155 4815 425 317 14 0 chr20 39702401 39702543 -26965462 + MER58B DNA MER1_type 198 341 0 258 105 0 0 chr20 39703023 39703061 -26964944 + (CAT)n Simple_repeat Simple_repeat 1 38 0 301 319 134 18 chr20 39703303 39703645 -26964360 + MLT1I LTR MaLR 28 409 0 293 310 143 32 chr20 39703758 39703935 -26964070 - L3 LINE CR1 -126 1451 1244 2030 200 87 11 chr20 39703935 39704404 -26963601 + MLT1D LTR MaLR 1 505 0 293 310 143 32 chr20 39704404 39704442 -26963563 - L3 LINE CR1 -333 1244 1212 191 267 27 113 chr20 39704651 39704801 -26963204 - L3 LINE CR1 -639 938 802 514 286 42 31 chr20 39705016 39705208 -26962797 - MIR SINE MIR -64 198 5 1628 156 7 3 chr20 39705886 39706168 -26961837 + L1M4 LINE L1 5369 5651 -533 2114 124 39 39 chr20 39706283 39706647 -26961358 - THE1B LTR MaLR 0 364 1 318 338 84 58 chr20 39707628 39708078 -26959927 - L1MEc LINE L1 -4187 2209 1748 301 181 14 42 chr20 39708178 39708250 -26959755 - MIR SINE MIR -109 153 84 450 320 54 0 chr20 39709410 39709557 -26958448 + MIR SINE MIR 58 212 -50 999 199 13 57 chr20 39710345 39710663 -26957342 + MER33 DNA MER1_type 1 290 -34 561 146 8 2 chr20 39710665 39710926 -26957079 + AluSx SINE Alu 1 309 0 246 108 0 0 chr20 39710928 39710965 -26957040 + MER33 DNA MER1_type 284 320 -4 1631 99 25 8 chr20 39711328 39711570 -26956435 + L1PB1 LINE L1 5906 6151 0 514 271 131 45 chr20 39712385 39712606 -26955399 - MIR SINE MIR -16 246 7 850 165 33 16 chr20 39712724 39712906 -26955099 + MER20 DNA MER1_type 31 215 -4 264 305 21 21 chr20 39712989 39713084 -26954921 - L2 LINE L2 0 3313 3219 435 338 116 35 chr20 39713875 39714446 -26953559 - L2 LINE L2 -188 3084 2468 310 240 105 39 chr20 39715184 39715343 -26952662 + MIR SINE MIR 28 191 -71 346 350 106 0 chr20 39716555 39716715 -26951290 - MIR3 SINE MIR -22 186 10 2464 228 158 40 chr20 39717627 39718398 -26949607 - MER21B LTR ERV1 -1 862 1 184 304 54 0 chr20 39718689 39718745 -26949260 + L2 LINE L2 3132 3190 -82 4292 184 35 35 chr20 39718774 39718911 -26949094 - L1MC4 LINE L1 0 8042 7906 255 79 0 0 chr20 39718911 39718949 -26949056 + (CA)n Simple_repeat Simple_repeat 2 39 0 4292 184 35 35 chr20 39718949 39719734 -26948271 - L1MC4 LINE L1 -135 7907 7120 8697 44 118 6 chr20 39721310 39722472 -26945533 - L1P LINE L1 -4371 1775 484 26493 26 0 0 chr20 39722472 39726212 -26941793 + L1PA2 LINE L1 2418 6155 0 25 31 0 0 chr20 39726654 39726686 -26941319 + AT_rich Low_complexity Low_complexity 1 32 0 267 234 94 0 chr20 39726773 39726837 -26941168 + MIR SINE MIR 122 191 -71 434 241 153 53 chr20 39726920 39727148 -26940857 + MLT1E2 LTR MaLR 2 252 -374 456 54 0 0 chr20 39727157 39727213 -26940792 - L1P1 LINE L1 -391 5764 5709 293 0 0 26 chr20 39727230 39727268 -26940737 + (TAA)n Simple_repeat Simple_repeat 3 39 0 1479 229 63 9 chr20 39727275 39727607 -26940398 + MLT1E2 LTR MaLR 269 618 -8 266 283 90 14 chr20 39727641 39727786 -26940219 - MIR SINE MIR -5 257 102 302 116 0 0 chr20 39728228 39728271 -26939734 - MER96B DNA MER1_type? -185 232 190 719 183 104 20 chr20 39728607 39728809 -26939196 + MER96B DNA MER1_type? 198 416 -1 267 152 0 0 chr20 39730687 39730733 -26937272 + A-rich Low_complexity Low_complexity 1 46 0 444 278 59 67 chr20 39732014 39732239 -26935766 + MLT1K LTR MaLR 49 305 -244 675 269 41 68 chr20 39732577 39732949 -26935056 + MLT1G3 LTR MaLR 1 335 -195 415 263 44 29 chr20 39732952 39733089 -26934916 + MLT1G3 LTR MaLR 454 592 -3 273 313 80 0 chr20 39734403 39734515 -26933490 - Tigger8 DNA MER2_type -436 230 110 467 297 126 18 chr20 39734600 39734886 -26933119 + L1MC4a LINE L1 5569 5885 -1923 257 345 18 35 chr20 39735457 39735570 -26932435 + Tigger8 DNA MER2_type 92 202 -464 572 335 65 20 chr20 39736006 39736254 -26931751 + MIR SINE MIR 3 261 -1 272 333 35 9 chr20 39736335 39736449 -26931556 + Tigger8 DNA MER2_type 520 636 -30 995 212 168 20 chr20 39736503 39736868 -26931137 - L1ME3 LINE L1 -11 6151 5680 1805 102 0 0 chr20 39736868 39737115 -26930890 + AluSg SINE Alu 59 305 0 995 212 168 20 chr20 39737115 39737213 -26930792 - L1ME3 LINE L1 -482 5680 5598 2974 91 3 0 chr20 39737326 39737689 -26930316 - THE1B LTR MaLR 0 364 1 252 337 22 0 chr20 39738303 39738395 -26929610 + MIR SINE MIR 11 104 -158 644 299 93 31 chr20 39739247 39739635 -26928370 - L1ME4a LINE L1 -160 5961 5550 2046 92 66 0 chr20 39739700 39739973 -26928032 + AluSc SINE Alu 1 291 -18 1471 183 0 64 chr20 39740222 39740533 -26927472 + AluJo SINE Alu 1 291 -21 1755 148 44 17 chr20 39740789 39741087 -26926918 + AluJo SINE Alu 1 306 -6 532 315 26 30 chr20 39741961 39742228 -26925777 + MLT1K LTR MaLR 316 581 -7 319 320 116 54 chr20 39742801 39743060 -26924945 - L2 LINE L2 -43 3229 2955 590 277 74 15 chr20 39744029 39744231 -26923774 + MIR SINE MIR 47 260 -2 1757 235 76 15 chr20 39745242 39745715 -26922290 + MLT1F LTR MaLR 1 502 -40 3712 118 34 31 chr20 39746941 39747172 -26920833 + MER41C LTR ERV1 1 230 -324 1890 139 0 56 chr20 39747172 39747475 -26920530 + AluSx SINE Alu 1 286 -26 3712 118 34 31 chr20 39747475 39747795 -26920210 + MER41C LTR ERV1 230 554 0 2658 138 55 33 chr20 39747980 39748437 -26919568 + MLT1C LTR MaLR 1 467 0 180 245 19 38 chr20 39748739 39748792 -26919213 + L2 LINE L2 3261 3312 -1 384 280 24 32 chr20 39750073 39750198 -26917807 - MER94 DNA DNA -1 133 10 523 270 156 23 chr20 39750304 39750567 -26917438 - LTR16C LTR ERVL -2 489 192 243 306 16 0 chr20 39750756 39750818 -26917187 + L2 LINE L2 3134 3196 -76 1807 150 20 20 chr20 39751087 39751387 -26916618 - AluJo SINE Alu -12 300 1 1458 226 87 34 chr20 39751777 39752189 -26915816 + MER63B DNA MER1_type 2 435 -1 435 296 5 82 chr20 39752427 39752623 -26915382 + LTR33 LTR ERVL 59 239 -282 315 277 21 11 chr20 39752733 39752827 -26915178 + LTR33 LTR ERVL 427 521 0 980 286 93 31 chr20 39753541 39754027 -26913978 + LTR33A LTR ERVL 5 520 -3 335 291 71 35 chr20 39754197 39754338 -26913667 + L2 LINE L2 3167 3312 -1 198 261 0 0 chr20 39754351 39754397 -26913608 - MIR SINE MIR -62 146 101 748 147 199 0 chr20 39754870 39755026 -26912979 - MER53 DNA DNA -2 187 1 207 292 158 0 chr20 39755108 39755228 -26912777 - MER5B DNA MER1_type -25 153 15 709 155 219 0 chr20 39755538 39755693 -26912312 - MER53 DNA DNA 0 189 1 5066 151 21 32 chr20 39755781 39756146 -26911859 - L1PA16 LINE L1 -8 6158 5791 672 52 67 0 chr20 39756146 39756281 -26911724 + (TA)n Simple_repeat Simple_repeat 2 145 0 5066 151 21 32 chr20 39756281 39757047 -26910958 - L1PA16 LINE L1 -375 5791 5041 398 234 318 21 chr20 39757500 39757739 -26910266 - L2 LINE L2 0 3313 3004 511 326 21 5 chr20 39757983 39758170 -26909835 + MIR SINE MIR 8 197 -65 654 224 34 14 chr20 39758209 39758356 -26909649 + MER63A DNA MER1_type 23 172 -38 1180 185 22 36 chr20 39758501 39758723 -26909282 - MER20 DNA MER1_type 0 219 1 454 237 82 22 chr20 39758938 39759073 -26908932 + MIR3 SINE MIR 2 144 -64 244 279 96 48 chr20 39760127 39760231 -26907774 + MIR SINE MIR 32 140 -122 387 290 36 51 chr20 39760267 39760405 -26907600 - L2 LINE L2 0 3272 3137 1078 288 80 5 chr20 39760472 39760858 -26907147 + L2 LINE L2 2898 3312 -1 198 0 0 0 chr20 39762003 39762025 -26905980 + (TG)n Simple_repeat Simple_repeat 2 23 0 291 362 60 40 chr20 39762104 39762303 -26905702 + L2 LINE L2 2584 2786 -528 21 0 0 0 chr20 39763684 39763705 -26904300 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr20 39763919 39763941 -26904064 + AT_rich Low_complexity Low_complexity 1 22 0 632 292 0 0 chr20 39764737 39764891 -26903114 + MIR SINE MIR 36 189 -73 1188 280 93 23 chr20 39764942 39765591 -26902414 - L2 LINE L2 -8 3305 2594 219 296 80 40 chr20 39766475 39766600 -26901405 + L2 LINE L2 2535 2664 -650 202 342 11 114 chr20 39766835 39767019 -26900986 + L2 LINE L2 3016 3180 -92 427 325 29 48 chr20 39767199 39767405 -26900600 - MIR SINE MIR -50 212 11 250 374 107 33 chr20 39767919 39768256 -26899749 - L2 LINE L2 -4 3309 2948 250 291 89 0 chr20 39769042 39769121 -26898884 - MIR SINE MIR -78 184 99 369 213 32 11 chr20 39769260 39769354 -26898651 - MIR SINE MIR -98 164 69 1026 265 8 22 chr20 39771865 39772133 -26895872 - MLT1H1 LTR MaLR 0 555 292 405 143 8 193 chr20 39772192 39772311 -26895694 - FRAM SINE Alu -17 159 63 517 301 28 23 chr20 39772313 39772489 -26895516 - MLT1H1 LTR MaLR -318 237 61 320 318 64 40 chr20 39773345 39773518 -26894487 - MER5B DNA MER1_type -1 177 1 668 319 52 4 chr20 39773986 39774218 -26893787 + MIR SINE MIR 5 247 -15 3787 176 67 20 chr20 39774239 39774586 -26893419 - L1MB1 LINE L1 -1 6167 5838 2099 111 10 3 chr20 39774586 39774875 -26893130 + AluSq SINE Alu 1 291 -22 3787 176 67 20 chr20 39774875 39775313 -26892692 - L1MB1 LINE L1 -330 5838 5345 1122 206 13 0 chr20 39775308 39775541 -26892464 + L1 LINE L1 5023 5258 -888 * 240 269 159 68 chr20 39775556 39775965 -26892040 + L2 LINE L2 2412 2857 -457 192 323 112 37 chr20 39776041 39776202 -26891803 + L2 LINE L2 2919 3091 -181 377 289 87 13 chr20 39776315 39776464 -26891541 + MIR SINE MIR 103 262 0 203 234 142 78 chr20 39776461 39776602 -26891403 + L2 LINE L2 3163 3312 -1 * 349 291 24 16 chr20 39776713 39776840 -26891165 + CT-rich Low_complexity Low_complexity 3 130 0 849 236 50 46 chr20 39776996 39777255 -26890750 + MLT1F1 LTR MaLR 308 567 0 876 225 29 0 chr20 39777586 39777759 -26890246 + MER5A DNA MER1_type 1 178 -11 284 270 140 78 chr20 39777763 39778332 -26889673 - L1MC/D LINE L1 -463 5658 5346 2394 85 0 3 chr20 39778751 39779057 -26888948 - AluSx SINE Alu -3 309 5 183 114 0 0 chr20 39779075 39779110 -26888895 + (T)n Simple_repeat Simple_repeat 1 35 0 929 208 101 39 chr20 39779287 39779494 -26888511 - MER58A DNA MER1_type -4 220 1 244 307 0 23 chr20 39779566 39779654 -26888351 + CT-rich Low_complexity Low_complexity 5 90 0 242 281 11 0 chr20 39779682 39779771 -26888234 + MIR SINE MIR 100 189 -73 2638 186 17 9 chr20 39780424 39780887 -26887118 + MLT1C LTR MaLR 1 467 0 616 295 13 50 chr20 39780940 39781185 -26886820 - MIR SINE MIR -16 246 13 327 317 89 17 chr20 39782025 39782205 -26885800 + MIR SINE MIR 33 225 -37 480 286 103 19 chr20 39783585 39783798 -26884207 - MIR SINE MIR -22 240 10 21 36 0 0 chr20 39784029 39784057 -26883948 + AT_rich Low_complexity Low_complexity 1 28 0 486 309 12 70 chr20 39784190 39784271 -26883734 - MIR SINE MIR -14 248 164 490 227 241 0 chr20 39784271 39784412 -26883593 + MER96 DNA MER1_type 1 175 0 486 309 12 70 chr20 39784412 39784573 -26883432 - MIR SINE MIR -98 164 20 216 0 0 0 chr20 39784761 39784785 -26883220 + (T)n Simple_repeat Simple_repeat 1 24 0 1236 173 0 41 chr20 39784798 39785018 -26882987 - AluJb SINE Alu -101 211 1 529 51 0 25 chr20 39785046 39785125 -26882880 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 286 241 13 25 chr20 39785190 39785269 -26882736 - MLT1K LTR MaLR 0 588 511 200 194 0 0 chr20 39785375 39785411 -26882594 + CT-rich Low_complexity Low_complexity 2 37 0 402 100 0 0 chr20 39785411 39785471 -26882534 + (CACCAT)n Simple_repeat Simple_repeat 3 62 0 180 176 0 0 chr20 39785933 39785967 -26882038 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 195 42 0 0 chr20 39786362 39786386 -26881619 + (GA)n Simple_repeat Simple_repeat 2 25 0 518 272 6 31 chr20 39786735 39786897 -26881108 + MER105 DNA DNA 3 160 -44 2223 97 19 16 chr20 39787120 39787429 -26880576 + AluSg SINE Alu 1 310 0 636 268 88 70 chr20 39787668 39787996 -26880009 + LTR16A LTR ERVL 93 426 -24 217 279 82 16 chr20 39788126 39788187 -26879818 - L2 LINE L2 0 3313 3249 969 285 77 15 chr20 39788437 39788827 -26879178 + MLT1J2 LTR MaLR 37 450 0 198 327 77 19 chr20 39788840 39788996 -26879009 - L2 LINE L2 -1594 1720 1556 457 265 8 8 chr20 39789401 39789533 -26878472 - MIR SINE MIR 0 262 131 251 165 117 78 chr20 39789533 39789636 -26878369 + L1ME4a LINE L1 5978 6084 -37 911 304 45 51 chr20 39790021 39790515 -26877490 - LTR16C LTR ERVL 0 491 1 587 264 0 21 chr20 39791554 39791694 -26876311 - MIR3 SINE MIR -32 176 40 502 329 31 31 chr20 39791867 39792092 -26875913 + MIR SINE MIR 20 244 -18 1502 168 53 33 chr20 39792241 39792545 -26875460 - AluJo SINE Alu -2 310 1 249 366 54 0 chr20 39793145 39793238 -26874767 + L2 LINE L2 3167 3264 -8 180 274 123 19 chr20 39794289 39794395 -26873610 + MIR SINE MIR 146 262 0 218 265 0 0 chr20 39794658 39794707 -26873298 - L2 LINE L2 -2 3311 3263 378 0 0 0 chr20 39794898 39794940 -26873065 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1995 5 5 0 chr20 39794940 39795151 -26872854 - L1PA3 LINE L1 -10 6145 5934 1110 0 0 16 chr20 39795151 39795277 -26872728 + L1PA3 LINE L1 5818 5941 -214 492 354 35 0 chr20 39796498 39796727 -26871278 - MIR SINE MIR -18 244 8 319 306 21 35 chr20 39798398 39798542 -26869463 + L2 LINE L2 3172 3313 0 1511 246 126 7 chr20 39798828 39799279 -26868726 + MLT1D LTR MaLR 1 505 0 895 298 58 36 chr20 39799401 39799573 -26868432 - MLT1J1 LTR MaLR -9 437 270 1751 82 20 39 chr20 39799573 39799828 -26868177 - L1PA13 LINE L1 -2 6161 5912 895 298 58 36 chr20 39799828 39800074 -26867931 - MLT1J1 LTR MaLR -176 270 43 262 340 12 30 chr20 39800344 39800487 -26867518 + MIR SINE MIR 12 151 -57 1001 108 0 74 chr20 39800548 39800724 -26867281 + AluSg/x SINE Alu 150 312 0 1909 143 7 19 chr20 39801020 39801328 -26866677 + AluJo SINE Alu 1 304 -8 318 26 0 0 chr20 39801698 39801737 -26866268 + (CA)n Simple_repeat Simple_repeat 2 40 0 442 231 52 61 chr20 39801787 39801999 -26866006 + L1MEd LINE L1 815 1024 -5095 34 42 0 0 chr20 39802362 39802410 -26865595 + AT_rich Low_complexity Low_complexity 1 48 0 312 307 249 26 chr20 39803721 39804066 -26863939 - L2 LINE L2 -1372 1942 1521 1874 167 20 0 chr20 39804784 39805077 -26862928 - AluJo SINE Alu -13 299 1 234 276 146 0 chr20 39806074 39806197 -26861808 + MIR SINE MIR 109 249 -13 309 361 104 30 chr20 39806313 39806911 -26861094 + L2 LINE L2 2331 2972 -342 860 131 0 41 chr20 39807034 39807179 -26860826 - L1PA11 LINE L1 -2 6172 6034 330 67 0 0 chr20 39807364 39807409 -26860596 + (TG)n Simple_repeat Simple_repeat 2 46 0 1629 184 7 7 chr20 39807460 39807769 -26860236 - AluJb SINE Alu -3 309 1 332 294 0 0 chr20 39808467 39808552 -26859453 - MER5A DNA MER1_type -82 107 23 421 356 11 27 chr20 39808978 39809156 -26858849 - MIR SINE MIR -59 203 29 317 258 79 11 chr20 39809156 39809245 -26858760 - MER5B DNA MER1_type -2 176 82 625 290 81 18 chr20 39809531 39809752 -26858253 - MIR SINE MIR -27 235 1 405 378 15 12 chr20 39809881 39810140 -26857865 + L3 LINE CR1 1317 1576 -1 429 317 72 11 chr20 39811207 39811394 -26856611 - MIR SINE MIR -48 214 13 2284 150 108 3 chr20 39811934 39812321 -26855684 - MSTB1 LTR MaLR -4 428 1 1971 151 3 0 chr20 39812541 39812840 -26855165 + AluSx SINE Alu 1 300 -12 222 312 96 40 chr20 39813179 39813304 -26854701 - L2 LINE L2 -2 3270 3139 274 304 22 85 chr20 39815284 39815508 -26852497 - L2 LINE L2 -985 2329 2120 21 0 0 0 chr20 39815624 39815645 -26852360 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr20 39815732 39815754 -26852251 + AT_rich Low_complexity Low_complexity 1 22 0 233 238 57 48 chr20 39817367 39817472 -26850533 - MIR SINE MIR -56 206 101 183 266 31 31 chr20 39817971 39818035 -26849970 - L2 LINE L2 -2 3311 3248 183 42 0 0 chr20 39818543 39818567 -26849438 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 744 303 32 5 chr20 39818848 39819069 -26848936 - MIR SINE MIR -14 248 22 292 281 199 0 chr20 39819461 39819607 -26848398 + MIR SINE MIR 8 182 -80 2031 150 6 10 chr20 39820085 39820398 -26847607 - AluSx SINE Alu 0 312 1 21 0 0 0 chr20 39820609 39820630 -26847375 + AT_rich Low_complexity Low_complexity 1 21 0 312 350 16 0 chr20 39820635 39820758 -26847247 - L1MC4a LINE L1 -1935 5873 5749 633 315 98 49 chr20 39821000 39821563 -26846442 - L2 LINE L2 -18 3295 2697 309 263 66 0 chr20 39821587 39821663 -26846342 + L2 LINE L2 3201 3281 -32 350 341 111 0 chr20 39821746 39821872 -26846133 - L2 LINE L2 0 3272 3133 255 31 0 0 chr20 39821978 39822010 -26845995 + (TTTAA)n Simple_repeat Simple_repeat 4 35 0 2083 124 0 10 chr20 39822011 39822301 -26845704 - AluSx SINE Alu -23 289 3 197 333 48 30 chr20 39822399 39822567 -26845438 - L2 LINE L2 -924 2390 2220 426 345 49 10 chr20 39822667 39822870 -26845135 + MIR SINE MIR 11 221 -41 657 219 0 7 chr20 39823040 39823195 -26844810 - L1MA10 LINE L1 -1 6333 6180 253 319 137 33 chr20 39825312 39825494 -26842511 + MIR SINE MIR 29 229 -33 420 265 84 84 chr20 39825499 39825748 -26842257 - MIR SINE MIR 0 262 14 194 250 77 19 chr20 39825717 39825769 -26842236 + L2 LINE L2 3200 3254 -18 * 250 200 0 27 chr20 39826434 39826509 -26841496 + GA-rich Low_complexity Low_complexity 3 75 0 354 329 14 14 chr20 39826824 39826964 -26841041 + MIR SINE MIR 4 143 -119 291 104 0 0 chr20 39827632 39827680 -26840325 + (TC)n Simple_repeat Simple_repeat 1 48 0 235 275 125 0 chr20 39829630 39829710 -26838295 - L2 LINE L2 -1 3271 3182 198 314 210 36 chr20 39829833 39830081 -26837924 + L2 LINE L2 2564 2854 -460 2550 199 54 39 chr20 39830231 39830843 -26837162 + MLT1E3 LTR MaLR 3 623 -1 1293 161 85 0 chr20 39831726 39831974 -26836031 - L1PA16 LINE L1 -4 6162 5894 656 72 2 38 chr20 39831982 39832089 -26835916 + L1MC/D LINE L1 5705 5808 -370 829 330 89 20 chr20 39832913 39833475 -26834530 - L2 LINE L2 -6 3307 2699 345 297 40 0 chr20 39833559 39833660 -26834345 - L2 LINE L2 0 3272 3168 447 212 40 10 chr20 39834127 39834226 -26833779 + MER63 DNA MER1_type 19 746 -90 279 343 50 43 chr20 39835012 39835152 -26832853 - MIR3 SINE MIR -62 146 6 213 275 66 33 chr20 39835130 39835221 -26832784 + L2 LINE L2 3219 3312 -1 * 189 196 0 0 chr20 39835575 39835621 -26832384 + T-rich Low_complexity Low_complexity 1 46 0 246 32 0 0 chr20 39837093 39837124 -26830881 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 272 244 37 22 chr20 39837128 39837263 -26830742 + (TA)n Simple_repeat Simple_repeat 1 137 0 8052 33 14 0 chr20 39838474 39839516 -26828489 - L1PA4 LINE L1 -3053 3093 2037 18748 33 0 50 chr20 39839516 39842625 -26825380 + L1PA4 LINE L1 3087 6155 0 2120 200 85 11 chr20 39843958 39844513 -26823492 - L1MD3 LINE L1 0 7995 7400 2113 139 0 0 chr20 39845320 39845622 -26822383 - AluSx SINE Alu -10 302 1 473 322 118 23 chr20 39845940 39846331 -26821674 + HAL1 LINE L1 1102 1529 -978 23 54 0 0 chr20 39846903 39846940 -26821065 + AT_rich Low_complexity Low_complexity 1 37 0 331 325 88 48 chr20 39847404 39847859 -26820146 + L1 LINE L1 2308 2780 -3366 241 333 139 8 chr20 39848293 39848422 -26819583 - L2 LINE L2 -193 3120 2975 313 315 73 41 chr20 39849100 39849608 -26818397 - L1P4 LINE L1 -356 5805 5282 222 221 35 12 chr20 39849611 39849697 -26818308 + (TAA)n Simple_repeat Simple_repeat 2 89 0 24 67 0 0 chr20 39849759 39849804 -26818201 + AT_rich Low_complexity Low_complexity 1 45 0 235 274 89 50 chr20 39849884 39850165 -26817840 - L1M4 LINE L1 -1099 5047 4756 21 0 0 0 chr20 39850392 39850413 -26817592 + AT_rich Low_complexity Low_complexity 1 21 0 315 236 0 0 chr20 39850452 39850524 -26817481 + L1 LINE L1 4374 4445 -1701 287 267 8 16 chr20 39850604 39850846 -26817159 + L1ME LINE L1 5187 5462 -704 1619 258 25 27 chr20 39850957 39851659 -26816346 + L1ME3 LINE L1 2439 3140 -3006 2800 101 0 3 chr20 39851659 39852035 -26815970 + THE1C LTR MaLR 1 375 0 1619 258 25 27 chr20 39852035 39852068 -26815937 + L1ME3 LINE L1 3140 3172 -2974 436 260 33 63 chr20 39852114 39852571 -26815434 + L1ME3 LINE L1 3311 3753 -2393 1189 281 91 38 chr20 39853135 39853834 -26814171 + L1ME3 LINE L1 4037 4802 -1344 2043 103 70 28 chr20 39853834 39854193 -26813812 - THE1C LTR MaLR -1 374 1 1189 281 91 38 chr20 39854193 39854456 -26813549 + L1ME3 LINE L1 4802 5050 -1096 596 210 48 0 chr20 39854478 39854602 -26813403 - MER20 DNA MER1_type 0 219 90 272 266 139 52 chr20 39854604 39854777 -26813228 + L1ME3 LINE L1 5465 5652 -518 218 186 47 0 chr20 39854777 39854863 -26813142 + (TA)n Simple_repeat Simple_repeat 1 90 0 632 205 225 30 chr20 39854870 39855219 -26812786 + L1ME3 LINE L1 5653 6075 -87 321 303 77 29 chr20 39855340 39855548 -26812457 - L1M4 LINE L1 -1548 4598 4381 591 305 33 19 chr20 39855993 39856203 -26811802 + MIR SINE MIR 48 260 -2 181 382 66 0 chr20 39857483 39857559 -26810446 + L2 LINE L2 3134 3214 -58 2190 221 87 40 chr20 39857620 39858394 -26809611 + L1ME1 LINE L1 5353 6162 -4 232 264 142 61 chr20 39858859 39859007 -26808998 + L2 LINE L2 3112 3271 -1 522 346 94 26 chr20 39859081 39859801 -26808204 + L2 LINE L2 2538 3313 0 845 122 0 7 chr20 39859801 39859949 -26808056 + (TGGA)n Simple_repeat Simple_repeat 2 148 0 435 280 229 0 chr20 39860754 39860929 -26807076 + MIR SINE MIR 32 246 -16 2636 26 3 0 chr20 39861890 39862193 -26805812 - AluY SINE Alu -7 304 1 303 259 55 104 chr20 39862792 39863012 -26804993 - MLT1J LTR MaLR -193 318 110 1049 237 14 0 chr20 39863044 39863259 -26804746 - MER20 DNA MER1_type 0 219 2 324 0 0 0 chr20 39864396 39864432 -26803573 + (TG)n Simple_repeat Simple_repeat 2 37 0 213 233 23 0 chr20 39864535 39864578 -26803427 + L2 LINE L2 3138 3181 -91 234 341 0 24 chr20 39864630 39864715 -26803290 - L2 LINE L2 -10 3262 3180 1486 233 6 13 chr20 39865357 39865671 -26802334 + AluJo SINE Alu 1 312 0 914 254 37 0 chr20 39865672 39865889 -26802116 + MIR SINE MIR 32 256 -6 222 220 66 44 chr20 39865919 39866010 -26801995 + (CATG)n Simple_repeat Simple_repeat 2 94 0 210 287 0 0 chr20 39866012 39866099 -26801906 + (TG)n Simple_repeat Simple_repeat 1 87 0 287 350 0 10 chr20 39866105 39866208 -26801797 + (TATG)n Simple_repeat Simple_repeat 3 104 0 230 242 0 61 chr20 39868204 39868270 -26799735 - MLT1H LTR MaLR -259 290 229 341 282 112 27 chr20 39869328 39869516 -26798489 + MIR SINE MIR 58 261 -1 406 262 0 0 chr20 39869784 39869868 -26798137 - MIR SINE MIR -174 88 5 213 94 0 0 chr20 39869888 39869920 -26798085 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 2210 103 3 10 chr20 39869933 39870233 -26797772 + AluY SINE Alu 1 298 -13 263 345 69 0 chr20 39870735 39870880 -26797125 + MIR SINE MIR 56 210 -52 307 348 38 38 chr20 39871401 39871559 -26796446 + L2 LINE L2 3041 3198 -74 497 190 18 0 chr20 39872269 39872437 -26795568 + GA-rich Low_complexity Low_complexity 1 171 0 324 270 58 51 chr20 39873849 39873986 -26794019 + MIR SINE MIR 18 155 -107 42 82 0 0 chr20 39874017 39874115 -26793890 + AT_rich Low_complexity Low_complexity 1 98 0 183 80 0 0 chr20 39874542 39874567 -26793438 + (GA)n Simple_repeat Simple_repeat 2 26 0 889 221 27 38 chr20 39874850 39875113 -26792892 - MIR SINE MIR 0 262 3 192 77 0 0 chr20 39875782 39875808 -26792197 + (TGGA)n Simple_repeat Simple_repeat 2 27 0 376 248 16 64 chr20 39876414 39876539 -26791466 - MIR SINE MIR -65 197 79 596 267 7 0 chr20 39877209 39877355 -26790650 - MIR SINE MIR -18 244 98 1356 258 75 52 chr20 39877356 39877891 -26790114 - L2 LINE L2 0 3313 2792 324 0 0 0 chr20 39877891 39877927 -26790078 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 2133 118 0 0 chr20 39877927 39878207 -26789798 - AluSx SINE Alu -32 280 1 2208 119 10 0 chr20 39878214 39878509 -26789496 - AluSc SINE Alu -11 298 1 1356 258 75 52 chr20 39878509 39878603 -26789402 - L2 LINE L2 -526 2787 2687 310 286 25 17 chr20 39878874 39878993 -26789012 - MIR SINE MIR -26 236 117 236 268 71 79 chr20 39879093 39879220 -26788785 + L2 LINE L2 3145 3270 -2 411 296 138 39 chr20 39879405 39879558 -26788447 + MIR SINE MIR 40 219 -43 1904 170 0 7 chr20 39879558 39879858 -26788147 + AluSx SINE Alu 1 298 -14 411 296 138 39 chr20 39879858 39879907 -26788098 + MIR SINE MIR 219 262 0 631 187 0 0 chr20 39880067 39880174 -26787831 + MER63A DNA MER1_type 71 177 -33 811 235 71 10 chr20 39880370 39880566 -26787439 - MIR SINE MIR -47 215 8 2377 102 0 0 chr20 39882446 39882741 -26785264 - AluSg SINE Alu -15 295 1 23 0 0 0 chr20 39883343 39883366 -26784639 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr20 39883781 39883804 -26784201 + AT_rich Low_complexity Low_complexity 1 23 0 2896 228 69 25 chr20 39883830 39884625 -26783380 - MER21B LTR ERV1 -14 849 20 353 261 0 23 chr20 39884652 39884740 -26783265 - MER21B LTR ERV1 -777 86 1 470 275 144 6 chr20 39884742 39884902 -26783103 - MIR SINE MIR -1 261 80 187 357 39 47 chr20 39885877 39886006 -26781999 + MER5B DNA MER1_type 1 128 -50 392 305 96 23 chr20 39886845 39887022 -26780983 - L2 LINE L2 0 3313 3124 918 298 93 15 chr20 39887470 39887869 -26780136 + MLT1H LTR MaLR 120 549 0 25226 144 12 10 chr20 39888973 39895385 -26772620 - L1PA8 LINE L1 -10 6477 3 21 0 0 0 chr20 39895537 39895558 -26772447 + AT_rich Low_complexity Low_complexity 1 21 0 1581 169 64 10 chr20 39896352 39896648 -26771357 - AluJb SINE Alu 0 312 1 319 324 90 7 chr20 39896765 39896910 -26771095 - L2 LINE L2 0 3272 3116 2280 62 7 0 chr20 39897290 39897597 -26770408 + L1P LINE L1 7 315 -5831 8765 20 0 0 chr20 39897597 39899392 -26768613 + L1PA2 LINE L1 4352 6150 -5 257 293 28 38 chr20 39899413 39899519 -26768486 - MIR SINE MIR -80 182 78 206 164 27 55 chr20 39899578 39899651 -26768354 + A-rich Low_complexity Low_complexity 4 74 0 210 171 73 0 chr20 39899881 39899922 -26768083 - L2 LINE L2 -8 3264 3221 1883 167 0 13 chr20 39900062 39900374 -26767631 + AluJb SINE Alu 5 312 0 313 299 121 53 chr20 39900640 39900847 -26767158 + MIR SINE MIR 27 247 -15 206 186 0 23 chr20 39900853 39900896 -26767109 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1315 213 121 69 chr20 39902053 39902575 -26765430 + MLT1H LTR MaLR 1 549 0 312 348 40 16 chr20 39903259 39903452 -26764553 - MIR SINE MIR -66 196 1 702 304 18 22 chr20 39903973 39904200 -26763805 - MIR SINE MIR -36 226 1 405 70 0 0 chr20 39904235 39904292 -26763713 + (CA)n Simple_repeat Simple_repeat 1 57 0 588 208 161 47 chr20 39904773 39905047 -26762958 + Charlie4a DNA MER1_type 187 491 -17 298 0 48 0 chr20 39905847 39905889 -26762116 + (CA)n Simple_repeat Simple_repeat 2 45 0 282 159 29 14 chr20 39906906 39906975 -26761030 + L1ME2 LINE L1 6031 6100 -64 25 31 0 0 chr20 39907353 39907385 -26760620 + AT_rich Low_complexity Low_complexity 1 32 0 186 43 0 0 chr20 39907680 39907703 -26760302 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2369 104 0 0 chr20 39907786 39908095 -26759910 - AluSg SINE Alu -1 309 1 26 0 0 0 chr20 39908597 39908623 -26759382 + AT_rich Low_complexity Low_complexity 1 26 0 21 0 0 0 chr20 39908909 39908930 -26759075 + AT_rich Low_complexity Low_complexity 1 21 0 304 310 62 40 chr20 39909608 39910031 -26757974 - L1MEc LINE L1 -4704 1692 1261 932 204 0 24 chr20 39910088 39910294 -26757711 - MER3 DNA MER1_type -1 208 8 33 25 0 0 chr20 39911177 39911217 -26756788 + AT_rich Low_complexity Low_complexity 1 40 0 261 277 13 0 chr20 39911559 39911714 -26756291 + L1ME LINE L1 5504 5804 -366 375 279 90 0 chr20 39912075 39912186 -26755819 + MIR SINE MIR 141 261 -1 272 250 69 14 chr20 39912236 39912308 -26755697 + L2 LINE L2 3190 3265 -7 207 304 78 35 chr20 39914730 39914845 -26753160 - L2 LINE L2 0 3272 3153 401 283 36 22 chr20 39915280 39915418 -26752587 - L2 LINE L2 -3 3310 3171 465 34 0 0 chr20 39915626 39915685 -26752320 + (CA)n Simple_repeat Simple_repeat 2 60 0 384 277 56 86 chr20 39916031 39916334 -26751671 + L1MCb LINE L1 847 1140 -4905 374 259 108 11 chr20 39916415 39916600 -26751405 + L1MCb LINE L1 3071 3273 -3291 * 3119 97 23 4 chr20 39916598 39917081 -26750924 - L1PA8A LINE L1 -1632 4514 4023 5604 105 14 2 chr20 39917081 39918339 -26749666 + L1PA8A LINE L1 4508 5780 -351 288 0 0 0 chr20 39918339 39918371 -26749634 + (TA)n Simple_repeat Simple_repeat 2 33 0 2108 59 39 0 chr20 39918392 39918678 -26749327 + L1PA8A LINE L1 5655 5951 -180 876 236 38 41 chr20 39918717 39919111 -26748894 + L1ME3 LINE L1 2667 3059 -3087 2219 230 66 26 chr20 39919217 39920179 -26747826 + L1ME3 LINE L1 4218 5251 -895 188 318 0 0 chr20 39920229 39920273 -26747732 - L2 LINE L2 -12 3260 3217 1428 135 5 0 chr20 39920645 39920853 -26747152 - AluSg/x SINE Alu -18 294 86 498 238 172 0 chr20 39920992 39921143 -26746862 + MER5A DNA MER1_type 13 189 0 424 344 38 27 chr20 39921256 39921442 -26746563 + MIR SINE MIR 63 250 -12 2041 114 6 3 chr20 39922056 39922372 -26745633 + L1PA8 LINE L1 5845 6161 -11 2257 207 53 16 chr20 39922420 39922847 -26745158 - L1MD3 LINE L1 -16 7979 7524 2673 142 16 7 chr20 39922847 39923271 -26744734 + MSTA LTR MaLR 1 428 0 2257 207 53 16 chr20 39923271 39923413 -26744592 - L1MD3 LINE L1 -471 7524 7389 247 184 61 0 chr20 39923415 39923464 -26744541 - MLT1F1 LTR MaLR -450 117 66 243 0 0 0 chr20 39923773 39923800 -26744205 + (CA)n Simple_repeat Simple_repeat 2 28 0 2135 76 7 13 chr20 39923909 39924213 -26743792 - L1PA13 LINE L1 0 6163 5862 21 0 0 0 chr20 39924894 39924915 -26743090 + AT_rich Low_complexity Low_complexity 1 21 0 1819 153 172 5 chr20 39926413 39926780 -26741225 + MSTA LTR MaLR 1 428 0 1008 211 38 35 chr20 39928079 39928340 -26739665 + MLT1H1 LTR MaLR 294 555 0 290 282 110 25 chr20 39928643 39928806 -26739199 + MIR SINE MIR 52 228 -34 21 36 0 0 chr20 39929080 39929108 -26738897 + AT_rich Low_complexity Low_complexity 1 28 0 1998 275 35 26 chr20 39929218 39929899 -26738106 + L1ME3 LINE L1 5463 6149 -13 205 263 0 0 chr20 39930921 39930978 -26737027 + MIR SINE MIR 77 133 -75 2011 135 10 3 chr20 39931994 39932283 -26735722 - AluSc SINE Alu -16 293 3 249 341 40 72 chr20 39932494 39932841 -26735164 + L2 LINE L2 1996 2326 -988 1055 174 63 5 chr20 39932841 39933048 -26734957 + MER20 DNA MER1_type 1 219 0 249 341 40 72 chr20 39933048 39933175 -26734830 + L2 LINE L2 2326 2455 -859 223 362 9 19 chr20 39933188 39933293 -26734712 + L3 LINE CR1 1474 1577 0 24 0 0 0 chr20 39933297 39933321 -26734684 + AT_rich Low_complexity Low_complexity 1 24 0 453 326 58 11 chr20 39933675 39933865 -26734140 + L2 LINE L2 3115 3313 0 345 336 21 29 chr20 39934098 39934238 -26733767 - L2 LINE L2 0 3272 3134 180 286 120 30 chr20 39934343 39934476 -26733529 + MIR SINE MIR 110 254 -8 403 271 31 0 chr20 39935299 39935395 -26732610 + MIR SINE MIR 73 171 -91 * 471 394 12 4 chr20 39935376 39935622 -26732383 - MIR SINE MIR -2 260 13 234 175 127 0 chr20 39936148 39936211 -26731794 - MLT1J1 LTR MaLR -22 424 354 493 275 76 95 chr20 39936275 39936591 -26731414 - MLT1H LTR MaLR -209 340 31 221 154 0 0 chr20 39936890 39936929 -26731076 + (TG)n Simple_repeat Simple_repeat 2 40 0 308 349 65 35 chr20 39937014 39937243 -26730762 + MIR SINE MIR 3 238 -24 2714 216 52 68 chr20 39937739 39938882 -26729123 + L1ME1 LINE L1 5040 6161 -5 25 75 0 0 chr20 39939975 39940028 -26727977 + AT_rich Low_complexity Low_complexity 1 53 0 24 53 0 0 chr20 39940054 39940092 -26727913 + AT_rich Low_complexity Low_complexity 1 38 0 186 133 0 0 chr20 39940158 39940188 -26727817 + (CTTTG)n Simple_repeat Simple_repeat 3 32 0 302 277 38 41 chr20 39940210 39940428 -26727577 + MLT1J2 LTR MaLR 63 309 -202 1011 152 39 22 chr20 39940463 39940694 -26727311 + L1MA8 LINE L1 6046 6280 -11 263 256 23 12 chr20 39940758 39940844 -26727161 + MLT1J LTR MaLR 425 511 0 388 274 32 105 chr20 39941535 39941725 -26726280 - MIR SINE MIR -72 190 15 33 73 0 0 chr20 39941788 39941856 -26726149 + AT_rich Low_complexity Low_complexity 1 68 0 192 171 86 0 chr20 39941882 39941917 -26726088 + MIR SINE MIR 69 106 -156 527 247 78 30 chr20 39941924 39942090 -26725915 - MIR SINE MIR -11 251 78 263 293 27 13 chr20 39942145 39942220 -26725785 + MIR3 SINE MIR 122 197 -11 742 291 65 62 chr20 39942961 39943377 -26724628 + LTR16A1 LTR ERVL 1 417 -40 21 0 0 0 chr20 39944340 39944361 -26723644 + AT_rich Low_complexity Low_complexity 1 21 0 1856 146 70 0 chr20 39944847 39945162 -26722843 - MER1B DNA MER1_type 0 337 1 514 304 124 25 chr20 39945862 39946145 -26721860 - MLT1J LTR MaLR -200 311 1 204 260 0 110 chr20 39946202 39946275 -26721730 + L2 LINE L2 3139 3203 -69 186 395 25 8 chr20 39946672 39946791 -26721214 + MIR SINE MIR 25 145 -63 279 71 0 0 chr20 39947354 39947396 -26720609 + (TG)n Simple_repeat Simple_repeat 2 43 0 3013 103 39 47 chr20 39947460 39947972 -26720033 - L1PB2 LINE L1 -2 6149 5642 1212 219 3 57 chr20 39948485 39948782 -26719223 + AluJo SINE Alu 2 282 -30 217 135 39 19 chr20 39949330 39949382 -26718623 + G-rich Low_complexity Low_complexity 4 56 0 718 175 0 12 chr20 39949400 39949560 -26718445 + GA-rich Low_complexity Low_complexity 4 161 0 1107 299 107 19 chr20 39950562 39950984 -26717021 - L2 LINE L2 -364 2950 2492 217 206 22 0 chr20 39952069 39952161 -26715844 + (TA)n Simple_repeat Simple_repeat 1 94 0 359 280 136 42 chr20 39952356 39952570 -26715435 - MIR SINE MIR -11 251 18 423 283 0 55 chr20 39953711 39953856 -26714149 + MLT1J LTR MaLR 48 184 -327 523 282 67 35 chr20 39953926 39954181 -26713824 + MLT1J LTR MaLR 214 476 -35 325 319 14 71 chr20 39954200 39954410 -26713595 + L1ME LINE L1 1148 1345 -5602 488 258 14 109 chr20 39954533 39954808 -26713197 + L1ME LINE L1 1167 1415 -5532 472 255 68 45 chr20 39954844 39955181 -26712824 + L1ME LINE L1 1328 1672 -5187 2796 191 24 66 chr20 39955193 39956406 -26711599 + L1MA5A LINE L1 5151 6264 -33 859 302 83 18 chr20 39956401 39956999 -26711006 + L1ME LINE L1 1757 2430 -4708 * 591 289 94 18 chr20 39956997 39957336 -26710669 + L1 LINE L1 3609 3973 -2173 * 533 262 7 7 chr20 39957330 39957471 -26710534 + L1ME1 LINE L1 6019 6159 -7 * 432 343 71 25 chr20 39957487 39957811 -26710194 + L1 LINE L1 4015 4353 -1793 629 295 62 38 chr20 39958135 39958423 -26709582 + L2 LINE L2 2895 3189 -124 228 268 169 0 chr20 39959250 39959321 -26708684 + L2 LINE L2 3231 3313 0 192 97 0 0 chr20 39960651 39960682 -26707323 + (CA)n Simple_repeat Simple_repeat 1 31 0 180 0 0 0 chr20 39961134 39961154 -26706851 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1926 131 0 59 chr20 39961157 39961463 -26706542 - AluSq SINE Alu -23 290 3 270 305 59 21 chr20 39961470 39961709 -26706296 - L1ME LINE L1 -553 5617 5370 349 261 43 53 chr20 39961792 39961980 -26706025 - L1ME LINE L1 -860 5286 5101 24 0 0 0 chr20 39962036 39962060 -26705945 + AT_rich Low_complexity Low_complexity 1 24 0 253 239 111 0 chr20 39962296 39962413 -26705592 - L1ME LINE L1 -1453 4693 4564 2558 41 0 29 chr20 39962540 39962855 -26705150 + AluY SINE Alu 1 306 -5 1103 184 10 0 chr20 39963043 39963249 -26704756 + MER2 DNA MER2_type 2 209 -136 201 94 0 0 chr20 39963250 39963282 -26704723 + (TTTTTA)n Simple_repeat Simple_repeat 2 33 0 315 300 97 34 chr20 39963342 39963741 -26704264 - L1ME LINE L1 -1905 4241 3817 2474 171 22 35 chr20 39963796 39964287 -26703718 + LTR45B LTR ERV1 3 487 -2 21 0 0 0 chr20 39964302 39964323 -26703682 + AT_rich Low_complexity Low_complexity 1 21 0 151 37 0 5 chr20 39964575 39964688 -26703317 + AT_rich Low_complexity Low_complexity 1 114 -103 2114 73 3 14 chr20 39964688 39964975 -26703030 - L1PA7 LINE L1 -7 6147 5864 151 37 0 5 chr20 39964975 39965079 -26702926 + AT_rich Low_complexity Low_complexity 114 217 0 237 244 107 47 chr20 39965269 39965568 -26702437 - L1ME LINE L1 -2910 3236 2920 225 356 85 8 chr20 39965679 39965797 -26702208 + L2 LINE L2 3133 3259 -13 222 211 0 0 chr20 39965801 39965853 -26702152 + (TTCA)n Simple_repeat Simple_repeat 1 52 0 266 335 13 63 chr20 39966216 39966374 -26701631 - MER5B DNA MER1_type -18 160 11 21 0 0 0 chr20 39966981 39967002 -26701003 + AT_rich Low_complexity Low_complexity 1 21 0 1582 199 62 41 chr20 39968082 39968470 -26699535 - MSTD LTR MaLR 0 396 1 21 71 0 0 chr20 39969691 39969733 -26698272 + AT_rich Low_complexity Low_complexity 1 42 0 869 301 70 33 chr20 39970588 39970917 -26697088 - LTR16C LTR ERVL -12 479 139 684 25 0 0 chr20 39974276 39974356 -26693649 + MADE1 DNA Mariner 1 80 0 21 0 0 0 chr20 39974599 39974620 -26693385 + AT_rich Low_complexity Low_complexity 1 21 0 403 45 182 0 chr20 39974682 39974748 -26693257 - MADE1 DNA Mariner -2 78 1 288 357 28 7 chr20 39974771 39974914 -26693091 + MER117 DNA MER1_type 50 195 -2 269 197 15 15 chr20 39975069 39975135 -26692870 - MER94 DNA DNA -68 66 1 23 0 0 0 chr20 39977008 39977031 -26690974 + AT_rich Low_complexity Low_complexity 1 23 0 416 226 186 8 chr20 39977319 39977443 -26690562 + MLT1A2 LTR MaLR 180 325 -49 346 296 90 16 chr20 39977667 39977856 -26690149 + L1M4 LINE L1 4047 4249 -1897 481 253 13 133 chr20 39978310 39978354 -26689651 + L1ME LINE L1 35 83 -5987 1755 114 57 91 chr20 39978354 39978740 -26689265 - THE1C LTR MaLR 0 375 3 481 253 13 133 chr20 39978740 39978995 -26689010 + L1ME LINE L1 83 298 -5772 1894 129 73 20 chr20 39979004 39979360 -26688645 + THE1C LTR MaLR 1 375 0 8630 147 5 52 chr20 39979362 39979763 -26688242 + THE1B-int LTR MaLR 3 421 -1159 2173 136 10 0 chr20 39979763 39980072 -26687933 + AluSq SINE Alu 1 312 -1 8630 147 5 52 chr20 39980072 39980206 -26687799 + THE1B-int LTR MaLR 421 560 -1020 2128 135 48 25 chr20 39980206 39980562 -26687443 + THE1B LTR MaLR 1 364 0 8630 147 5 52 chr20 39980562 39981681 -26686324 + THE1B-int LTR MaLR 560 1580 0 1591 180 68 17 chr20 39981683 39982038 -26685967 + THE1C LTR MaLR 3 375 0 467 232 53 13 chr20 39982081 39982232 -26685773 + L1ME LINE L1 736 892 -5178 667 32 21 11 chr20 39982434 39982528 -26685477 + (TAGA)n Simple_repeat Simple_repeat 4 98 0 264 149 0 0 chr20 39982694 39982741 -26685264 - U5 snRNA snRNA -69 47 1 362 260 49 83 chr20 39982755 39983020 -26684985 + L1MC4 LINE L1 7785 8040 -2 248 53 26 0 chr20 39983175 39983213 -26684792 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 1617 184 3 31 chr20 39983215 39983503 -26684502 - AluSx SINE Alu -32 280 1 365 157 36 0 chr20 39983532 39983615 -26684390 + L1MB3 LINE L1 6095 6180 -3 24 53 0 0 chr20 39983615 39983653 -26684352 + AT_rich Low_complexity Low_complexity 1 38 0 444 321 124 4 chr20 39983882 39984156 -26683849 - MLT1K LTR MaLR -27 561 255 18334 173 30 20 chr20 39984258 39987397 -26680608 + L1MA2 LINE L1 13 3119 -4604 2115 110 3 11 chr20 39987397 39987679 -26680326 + AluSg SINE Alu 1 280 -30 18334 173 30 20 chr20 39987679 39990296 -26677709 + L1MA2 LINE L1 3119 5708 -2015 2073 146 0 0 chr20 39990296 39990591 -26677414 + AluSq SINE Alu 1 295 -18 18334 173 30 20 chr20 39990591 39990682 -26677323 + L1MA2 LINE L1 5708 5797 -1926 1848 156 14 3 chr20 39990682 39990970 -26677035 - AluJb SINE Alu -21 291 1 18334 173 30 20 chr20 39990970 39993065 -26674940 + L1MA2 LINE L1 5797 7723 0 265 208 0 0 chr20 39994015 39994063 -26673942 - MER94 DNA DNA -86 48 1 353 322 13 25 chr20 39995213 39995334 -26672671 + MIR SINE MIR 30 153 -70 753 266 79 9 chr20 39995390 39995604 -26672401 - MIR SINE MIR -21 241 13 366 340 12 31 chr20 39996446 39996608 -26671397 - MIR SINE MIR -62 200 42 656 230 11 6 chr20 39997069 39997247 -26670758 + L1M4 LINE L1 2674 2852 -3294 1399 216 129 2 chr20 39997273 39997676 -26670329 - L1ME1 LINE L1 -8 6438 5985 842 244 103 10 chr20 39997698 39998239 -26669766 - L1ME1 LINE L1 -537 5909 5321 274 255 172 29 chr20 39998241 39998751 -26669254 - L1ME1 LINE L1 -4413 2194 1436 311 184 20 82 chr20 39998880 39998978 -26669027 - L1ME1 LINE L1 -5165 1261 1170 562 309 28 3 chr20 39999055 39999343 -26668662 - L1ME1 LINE L1 -5271 1155 861 257 377 101 0 chr20 39999355 39999493 -26668512 - MIR SINE MIR -109 153 2 454 318 28 8 chr20 40000699 40000954 -26667051 + HAL1 LINE L1 1269 1528 -979 232 308 26 0 chr20 40000955 40001033 -26666972 - ORSL DNA AcHobo -1 274 195 190 202 39 10 chr20 40001055 40001159 -26666846 + (TA)n Simple_repeat Simple_repeat 2 108 0 278 232 14 0 chr20 40001163 40001232 -26666773 + MER21B LTR ERV1 5 74 -789 1839 212 58 29 chr20 40001245 40001726 -26666279 - LTR31 LTR ERV1 -9 610 116 1521 232 81 40 chr20 40001875 40002595 -26665410 + MER21B LTR ERV1 19 794 -69 226 234 0 16 chr20 40002904 40002968 -26665037 + HAL1 LINE L1 1581 1643 -864 713 238 0 64 chr20 40003532 40003734 -26664271 + MER5A DNA MER1_type 1 189 0 2169 107 0 0 chr20 40004046 40004356 -26663649 + AluSx SINE Alu 1 310 0 2226 88 0 3 chr20 40004361 40004646 -26663359 + AluY SINE Alu 1 284 -27 208 197 15 15 chr20 40004685 40004751 -26663254 + GA-rich Low_complexity Low_complexity 2 67 0 308 275 28 115 chr20 40005043 40005225 -26662780 + HAL1b LINE L1 733 898 -450 1379 202 32 8 chr20 40005680 40005932 -26662073 - AluJo SINE Alu -22 290 33 275 240 13 0 chr20 40006748 40006823 -26661182 + L1MB7 LINE L1 6099 6174 -10 403 281 126 9 chr20 40008153 40008384 -26659621 - L1ME LINE L1 -333 5788 5531 203 344 31 0 chr20 40008928 40008992 -26659013 + MIR SINE MIR 34 99 -163 194 436 17 0 chr20 40009014 40009131 -26658874 + L2 LINE L2 2927 3045 -268 231 173 0 0 chr20 40009338 40009390 -26658615 + (CA)n Simple_repeat Simple_repeat 2 53 0 675 247 11 11 chr20 40009409 40009587 -26658418 - MER5B DNA MER1_type 0 178 1 607 296 68 0 chr20 40009590 40009766 -26658239 + MER5A DNA MER1_type 1 188 -1 1977 159 113 13 chr20 40010393 40010782 -26657223 - MSTA LTR MaLR 0 428 1 8487 170 24 43 chr20 40010782 40012158 -26655847 - MSTA-int LTR MaLR 0 1651 312 1584 191 14 0 chr20 40012158 40012435 -26655570 + AluJb SINE Alu 31 311 -1 8487 170 24 43 chr20 40012435 40012742 -26655263 - MSTA-int LTR MaLR -1339 312 1 969 160 105 0 chr20 40012742 40012923 -26655082 - MSTA LTR MaLR 0 428 229 2572 104 58 21 chr20 40012923 40013355 -26654650 + LTR7 LTR ERV1 1 448 -2 17982 97 49 12 chr20 40013357 40014159 -26653846 + HERVH LTR ERV1 1 772 -6941 2505 68 0 0 chr20 40014159 40014467 -26653538 - AluY SINE Alu -3 308 1 17982 97 49 12 chr20 40014467 40016546 -26651459 + HERVH LTR ERV1 772 2987 -4726 763 157 27 0 chr20 40016540 40016687 -26651318 + HERVH LTR ERV1 3140 3290 -4423 * 3247 93 6 10 chr20 40016686 40017182 -26650823 + HERVH LTR ERV1 3500 3993 -3720 2755 135 23 23 chr20 40017184 40017801 -26650204 + HERVH LTR ERV1 4488 5149 -2564 1210 126 37 9 chr20 40017802 40018016 -26649989 + HERVH LTR ERV1 5600 5819 -1894 2389 75 48 3 chr20 40018016 40018389 -26649616 + HERVH LTR ERV1 7324 7713 0 2564 107 46 9 chr20 40018389 40018821 -26649184 + LTR7 LTR ERV1 1 448 -2 974 144 149 0 chr20 40018825 40019026 -26648979 - MSTA LTR MaLR -197 231 1 219 297 0 71 chr20 40019034 40019113 -26648892 + MIR SINE MIR 38 111 -97 322 334 74 80 chr20 40019224 40019685 -26648320 - L2 LINE L2 -3 3310 2853 510 283 118 25 chr20 40020810 40021047 -26646958 + MIR SINE MIR 4 262 0 705 318 15 0 chr20 40021098 40021296 -26646709 - MIR SINE MIR 0 262 62 287 305 9 9 chr20 40021561 40021666 -26646339 + MIR SINE MIR 79 183 -79 346 216 138 35 chr20 40021679 40021795 -26646210 + MIR SINE MIR 10 137 -125 1086 166 83 9 chr20 40022243 40022460 -26645545 - MER46A DNA MER2_type -3 233 1 230 255 0 0 chr20 40022495 40022546 -26645459 - Cheshire DNA MER1_type -1527 893 843 364 277 0 11 chr20 40022560 40022654 -26645351 - Cheshire DNA MER1_type -2327 93 1 669 291 90 0 chr20 40022660 40022894 -26645111 + MIR SINE MIR 8 262 0 428 333 20 7 chr20 40023033 40023186 -26644819 + MER5A DNA MER1_type 35 189 0 2316 100 0 3 chr20 40024600 40024899 -26643106 + AluSx SINE Alu 1 298 -14 289 327 0 64 chr20 40024949 40025105 -26642900 + L3 LINE CR1 324 469 -1108 2223 108 3 7 chr20 40025872 40026178 -26641827 + AluSc SINE Alu 1 305 -4 280 353 10 10 chr20 40026229 40026331 -26641674 + MER5A DNA MER1_type 1 102 -87 330 348 37 31 chr20 40026741 40026902 -26641103 + MIR SINE MIR 19 180 -82 191 319 0 0 chr20 40027117 40027164 -26640841 + L3 LINE CR1 1425 1471 -106 1833 136 10 52 chr20 40028229 40028538 -26639467 + AluSx SINE Alu 1 296 -16 287 323 39 15 chr20 40029589 40029719 -26638286 - MIR SINE MIR -19 243 111 765 187 148 24 chr20 40029719 40029928 -26638077 + MER96B DNA MER1_type? 1 235 -182 186 150 0 0 chr20 40033287 40033327 -26634678 + (CA)n Simple_repeat Simple_repeat 2 41 0 414 51 0 17 chr20 40033459 40033518 -26634487 + L1PA5 LINE L1 6093 6150 -4 321 68 0 0 chr20 40033666 40033710 -26634295 + (TG)n Simple_repeat Simple_repeat 1 44 0 337 255 163 0 chr20 40033758 40033856 -26634149 - MIR SINE MIR -87 175 62 196 276 69 0 chr20 40035752 40035810 -26632195 + MIR SINE MIR 173 234 -28 905 231 19 40 chr20 40036595 40036920 -26631085 + HsTC2 DNA Tc2 1283 1776 -122 481 302 79 10 chr20 40037311 40037513 -26630492 - MIR SINE MIR -7 255 40 207 217 17 17 chr20 40039241 40039301 -26628704 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 243 103 0 0 chr20 40039470 40039509 -26628496 + (GA)n Simple_repeat Simple_repeat 2 40 0 347 265 118 76 chr20 40039584 40039822 -26628183 - MIR SINE MIR -4 258 11 239 331 118 22 chr20 40039863 40039999 -26628006 - MIR3 SINE MIR -3 205 57 543 348 65 21 chr20 40041675 40042057 -26625948 + LTR16A LTR ERVL 30 428 -22 887 311 84 25 chr20 40042563 40043008 -26624997 + L2 LINE L2 2802 3279 -34 1921 147 4 0 chr20 40043141 40043420 -26624585 + AluSx SINE Alu 1 280 -32 207 0 0 0 chr20 40043420 40043443 -26624562 + (TAAAA)n Simple_repeat Simple_repeat 2 24 0 452 373 69 13 chr20 40043459 40043762 -26624243 + L2 LINE L2 2554 2873 -441 21 71 0 0 chr20 40046236 40046278 -26621727 + AT_rich Low_complexity Low_complexity 1 42 0 899 144 7 7 chr20 40046284 40046437 -26621568 - L1PA14 LINE L1 -9 6152 6000 586 258 99 9 chr20 40046583 40046796 -26621209 - MIR SINE MIR -21 241 10 650 234 31 22 chr20 40047594 40047820 -26620185 + L1MC5 LINE L1 7012 7239 -722 696 198 108 33 chr20 40047947 40048159 -26619846 + MER33 DNA MER1_type 1 228 -96 2105 111 20 7 chr20 40048498 40048796 -26619209 + AluSx SINE Alu 1 302 -10 312 206 43 114 chr20 40049232 40049416 -26618589 + MER69 DNA AcHobo 1 2520 -6 2006 202 85 15 chr20 40049581 40050051 -26617954 + MLT1D LTR MaLR 2 504 -1 186 156 0 0 chr20 40050414 40050446 -26617559 + MIR SINE MIR 84 115 -147 217 279 128 0 chr20 40050772 40050858 -26617147 + MIR SINE MIR 149 245 -17 264 335 26 26 chr20 40051966 40052136 -26615869 - MER5A DNA MER1_type -9 180 1 23 0 0 0 chr20 40053630 40053653 -26614352 + AT_rich Low_complexity Low_complexity 1 23 0 25 75 0 0 chr20 40054421 40054474 -26613531 + AT_rich Low_complexity Low_complexity 1 53 0 333 0 0 0 chr20 40054655 40054692 -26613313 + (TG)n Simple_repeat Simple_repeat 2 38 0 234 0 0 0 chr20 40054691 40054717 -26613288 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 405 323 35 38 chr20 40055109 40055428 -26612577 - L1ME LINE L1 -525 5645 5328 2340 39 54 0 chr20 40055594 40055874 -26612131 - AluY SINE Alu -16 295 1 489 232 67 61 chr20 40056188 40056352 -26611653 + MLT1I LTR MaLR 245 409 0 742 298 81 29 chr20 40056412 40057138 -26610867 - L1ME LINE L1 -1278 4868 4105 717 254 63 48 chr20 40057267 40057664 -26610341 + L1MC5 LINE L1 7126 7528 -433 394 284 41 83 chr20 40057723 40057941 -26610064 + L1ME3A LINE L1 5955 6163 -7 344 161 59 85 chr20 40057942 40058060 -26609945 - L1ME LINE L1 -2155 3991 3877 595 316 126 22 chr20 40058292 40059705 -26608300 - L1ME LINE L1 -2476 3670 2111 32 57 0 0 chr20 40059899 40059952 -26608053 + AT_rich Low_complexity Low_complexity 1 53 0 224 316 49 126 chr20 40060530 40060777 -26607228 - L2 LINE L2 -12 3260 3033 210 204 41 0 chr20 40060809 40060858 -26607147 + GA-rich Low_complexity Low_complexity 2 52 0 313 333 72 61 chr20 40060934 40061472 -26606533 - L2 LINE L2 -474 2840 2297 522 319 24 40 chr20 40062801 40063052 -26604953 + MIR SINE MIR 13 259 -3 548 318 17 50 chr20 40063513 40063752 -26604253 - MIR SINE MIR -23 239 9 3425 159 9 30 chr20 40065210 40065902 -26602103 - L1MB2 LINE L1 -7 6164 5488 467 16 0 16 chr20 40065902 40065963 -26602042 + (TCC)n Simple_repeat Simple_repeat 2 61 0 11918 128 50 5 chr20 40065963 40067688 -26600317 - Tigger1 DNA MER2_type -285 2133 300 288 0 0 0 chr20 40067688 40067720 -26600285 + (GA)n Simple_repeat Simple_repeat 1 32 0 11918 128 50 5 chr20 40067720 40068035 -26599970 - Tigger1 DNA MER2_type -2118 300 1 423 304 68 6 chr20 40068629 40068806 -26599199 - MIR SINE MIR -9 253 67 351 0 0 0 chr20 40069169 40069208 -26598797 + (CA)n Simple_repeat Simple_repeat 1 39 0 2077 145 0 0 chr20 40069795 40070104 -26597901 - AluSx SINE Alu 0 309 1 2251 90 7 0 chr20 40071437 40071765 -26596240 - AluSc SINE Alu 0 330 1 185 275 143 22 chr20 40071840 40071931 -26596074 - L2 LINE L2 -27 3245 3144 193 320 155 35 chr20 40072238 40072613 -26595392 - L2 LINE L2 -469 2845 2426 342 67 0 0 chr20 40073271 40073316 -26594689 + (TA)n Simple_repeat Simple_repeat 2 46 0 2045 104 42 7 chr20 40073316 40073600 -26594405 - AluSq SINE Alu -15 298 5 324 274 32 21 chr20 40073635 40073730 -26594275 + MIR SINE MIR 76 171 -91 402 219 53 150 chr20 40073791 40074037 -26593968 - L2 LINE L2 0 3313 3092 374 300 113 25 chr20 40074043 40074203 -26593802 + MIR SINE MIR 85 258 -4 276 313 86 0 chr20 40074243 40074371 -26593634 - L2 LINE L2 -256 3057 2919 384 321 65 30 chr20 40075107 40075275 -26592730 + MIR SINE MIR 20 193 -69 488 285 24 73 chr20 40075413 40075747 -26592258 + L2 LINE L2 2950 3313 0 321 336 150 14 chr20 40076318 40076538 -26591467 + MIR SINE MIR 12 261 -1 426 307 128 0 chr20 40076965 40077144 -26590861 - MIR SINE MIR -31 231 30 352 320 92 59 chr20 40077220 40077816 -26590189 + L2 LINE L2 2242 2857 -457 357 258 58 33 chr20 40078313 40078433 -26589572 - L2 LINE L2 -2 3270 3148 252 363 20 10 chr20 40078613 40078715 -26589290 - MIR SINE MIR -149 113 11 234 0 0 0 chr20 40078782 40078808 -26589197 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1790 94 27 94 chr20 40078812 40079111 -26588894 - AluSx SINE Alu -33 279 1 212 184 0 0 chr20 40079505 40079543 -26588462 + (TAA)n Simple_repeat Simple_repeat 2 39 0 341 307 11 26 chr20 40079715 40079904 -26588101 + L1ME4a LINE L1 5715 5900 -221 23 33 0 0 chr20 40080468 40080498 -26587507 + AT_rich Low_complexity Low_complexity 1 30 0 402 238 55 30 chr20 40080531 40080695 -26587310 + L1MC4a LINE L1 5730 5897 -1911 180 0 0 0 chr20 40080712 40080732 -26587273 + (TG)n Simple_repeat Simple_repeat 1 20 0 24 0 0 0 chr20 40080890 40080914 -26587091 + AT_rich Low_complexity Low_complexity 1 24 0 444 67 0 0 chr20 40081053 40081113 -26586892 + (TG)n Simple_repeat Simple_repeat 1 60 0 285 336 45 0 chr20 40083058 40083192 -26584813 + MIR SINE MIR 75 214 -48 240 325 0 36 chr20 40083467 40083550 -26584455 - L3 LINE CR1 -73 1504 1425 232 301 102 58 chr20 40083703 40083909 -26584096 - L3 LINE CR1 -203 1374 1160 378 0 0 0 chr20 40084276 40084318 -26583687 + (TG)n Simple_repeat Simple_repeat 2 43 0 1725 216 75 36 chr20 40084954 40085422 -26582583 - MLT1D LTR MaLR 0 505 20 291 267 86 0 chr20 40086843 40086948 -26581057 - MIR SINE MIR -64 198 85 24 32 0 0 chr20 40087582 40087613 -26580392 + AT_rich Low_complexity Low_complexity 1 31 0 1161 209 60 76 chr20 40087656 40088024 -26579981 - MLT1B LTR MaLR 0 390 29 618 26 0 0 chr20 40088064 40088140 -26579865 + (TAGA)n Simple_repeat Simple_repeat 3 78 0 1081 133 0 44 chr20 40088409 40088590 -26579415 - AluSg/x SINE Alu -5 305 133 636 256 88 0 chr20 40089650 40089810 -26578195 - MER5B DNA MER1_type -4 174 1 188 265 102 51 chr20 40089827 40089896 -26578109 - MER5B DNA MER1_type -2 176 99 764 178 61 11 chr20 40089896 40090076 -26577929 - MER5A DNA MER1_type 0 189 1 188 265 102 51 chr20 40090076 40090104 -26577901 - MER5B DNA MER1_type -79 99 74 216 338 98 44 chr20 40090248 40090343 -26577662 + MIR SINE MIR 3 91 -171 538 261 0 0 chr20 40090343 40090454 -26577551 - MER81 DNA DNA -2 112 2 216 338 98 44 chr20 40090454 40090583 -26577422 + MIR SINE MIR 91 239 -23 872 193 6 34 chr20 40090706 40090882 -26577123 + MER5B DNA MER1_type 1 171 -7 606 214 66 60 chr20 40090884 40091066 -26576939 + MER5A DNA MER1_type 7 189 0 23 0 0 0 chr20 40091571 40091594 -26576411 + AT_rich Low_complexity Low_complexity 1 23 0 2450 134 0 3 chr20 40092196 40092561 -26575444 - THE1B LTR MaLR 0 364 1 380 274 121 33 chr20 40092706 40092921 -26575084 - L1ME4a LINE L1 -280 5841 5608 224 169 28 56 chr20 40093055 40093126 -26574879 + T-rich Low_complexity Low_complexity 4 72 0 426 353 16 27 chr20 40093282 40093469 -26574536 + MER5A DNA MER1_type 4 188 -1 286 279 63 0 chr20 40097155 40097234 -26570771 - MIR SINE MIR -22 240 157 1888 168 0 3 chr20 40097426 40097723 -26570282 + AluSx SINE Alu 1 296 -16 276 30 0 0 chr20 40097783 40097816 -26570189 + (TG)n Simple_repeat Simple_repeat 1 33 0 2619 175 47 13 chr20 40097963 40098494 -26569511 + L1PB4 LINE L1 5606 6154 -2 230 184 0 0 chr20 40099347 40099385 -26568620 - MIR SINE MIR -30 232 195 361 311 8 38 chr20 40099466 40099598 -26568407 - L2 LINE L2 -9 3263 3136 401 343 132 5 chr20 40099680 40099899 -26568106 - MIR SINE MIR -13 249 3 2326 89 3 9 chr20 40100300 40100615 -26567390 - AluSp SINE Alu 0 313 1 192 304 38 38 chr20 40100684 40100763 -26567242 + L2 LINE L2 3194 3272 0 357 0 0 0 chr20 40100879 40100920 -26567085 - L1PA4 LINE L1 -273 5882 5842 503 104 0 0 chr20 40100920 40100989 -26567016 + L1PA5 LINE L1 6072 6148 -6 213 329 12 12 chr20 40101056 40101141 -26566864 - L2 LINE L2 -782 2532 2448 567 307 64 23 chr20 40102169 40102387 -26565618 + MIR SINE MIR 36 262 0 23 0 0 0 chr20 40102423 40102446 -26565559 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr20 40102499 40102519 -26565486 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 195 341 24 12 chr20 40102585 40102667 -26565338 + L2 LINE L2 3173 3255 -17 280 336 75 22 chr20 40104132 40104266 -26563739 + MER5A DNA MER1_type 23 163 -26 1382 250 47 19 chr20 40104334 40104802 -26563203 - L1ME1 LINE L1 -193 6042 5562 1306 125 39 4 chr20 40104826 40105058 -26562947 - MSTA LTR MaLR -188 240 1 1681 249 16 10 chr20 40105058 40105564 -26562441 - L1ME1 LINE L1 -1125 5090 4582 506 234 96 0 chr20 40105569 40105808 -26562197 - L1ME1 LINE L1 -1708 4507 4246 3730 251 38 39 chr20 40105813 40107747 -26560258 - L1ME1 LINE L1 -2404 3811 1906 236 128 0 0 chr20 40107753 40107800 -26560205 + LTR66 LTR ERVL 394 440 -170 2411 241 104 33 chr20 40107879 40108807 -26559198 - L1ME1 LINE L1 -5357 1039 46 217 250 83 14 chr20 40108819 40108891 -26559114 - MIR SINE MIR -102 160 84 2215 132 0 0 chr20 40108895 40109205 -26558800 + AluSx SINE Alu 2 311 -1 236 30 30 0 chr20 40109912 40109945 -26558060 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 188 303 67 22 chr20 40110728 40110817 -26557188 - MIR SINE MIR -78 130 38 221 281 21 42 chr20 40110868 40110964 -26557041 + MER5A DNA MER1_type 30 123 -66 1547 184 38 53 chr20 40110964 40111436 -26556569 - LTR55 LTR ERV -2 546 82 2468 58 3 0 chr20 40112819 40113155 -26554850 - AluY SINE Alu 0 337 1 268 356 10 0 chr20 40113312 40113413 -26554592 + MER5A DNA MER1_type 4 105 -84 427 197 125 82 chr20 40113635 40113843 -26554162 - MER112 DNA MER1_type -42 218 2 219 302 125 0 chr20 40113844 40113940 -26554065 + L2 LINE L2 3199 3306 -7 268 156 16 0 chr20 40114163 40114227 -26553778 - L1MA9 LINE L1 -30 6282 6218 277 188 50 0 chr20 40114232 40114312 -26553693 + (TA)n Simple_repeat Simple_repeat 1 84 0 650 201 71 80 chr20 40114375 40114553 -26553452 + L1 LINE L1 3702 3879 -2267 2262 104 0 3 chr20 40114553 40114852 -26553153 + AluSx SINE Alu 1 298 -14 650 201 71 80 chr20 40114852 40114898 -26553107 + L1 LINE L1 3879 3924 -2222 469 338 7 0 chr20 40115136 40115287 -26552718 - L2 LINE L2 -1 3312 3161 241 100 40 0 chr20 40115352 40115402 -26552603 + (TA)n Simple_repeat Simple_repeat 1 52 0 206 354 131 15 chr20 40115844 40115974 -26552031 - MIR3 SINE MIR -54 154 10 2082 117 40 0 chr20 40118108 40118408 -26549597 + AluSx SINE Alu 1 312 0 22 35 0 0 chr20 40119446 40119475 -26548530 + AT_rich Low_complexity Low_complexity 1 29 0 435 312 83 29 chr20 40119952 40120157 -26547848 + MIR SINE MIR 47 262 0 234 259 71 12 chr20 40120240 40120325 -26547680 + MLT1L LTR MaLR 148 237 -378 21 57 0 0 chr20 40120717 40120752 -26547253 + AT_rich Low_complexity Low_complexity 1 35 0 738 325 65 14 chr20 40121177 40121687 -26546318 - L1M4 LINE L1 -782 5364 4829 649 276 143 19 chr20 40121688 40122051 -26545954 + MLT1I LTR MaLR 2 409 0 2165 111 4 0 chr20 40122465 40122744 -26545261 + AluSx SINE Alu 1 280 -32 382 194 10 10 chr20 40122744 40122842 -26545163 + GA-rich Low_complexity Low_complexity 6 103 0 183 222 0 0 chr20 40123018 40123063 -26544942 + GA-rich Low_complexity Low_complexity 3 47 0 231 167 0 0 chr20 40123131 40123173 -26544832 + T-rich Low_complexity Low_complexity 1 42 0 183 340 113 28 chr20 40123910 40124051 -26543954 - MIR SINE MIR -77 185 33 287 398 16 8 chr20 40124460 40124583 -26543422 - L2 LINE L2 -1 3271 3148 405 330 23 60 chr20 40125621 40125836 -26542169 - L3 LINE CR1 -201 1376 1170 36 77 0 0 chr20 40126822 40126900 -26541105 + AT_rich Low_complexity Low_complexity 1 78 0 1883 197 0 8 chr20 40127007 40127358 -26540647 + MER7A DNA MER2_type 1 346 0 430 241 85 124 chr20 40127959 40128397 -26539608 + HAL1b LINE L1 13 236 -1112 21 36 0 0 chr20 40128422 40128450 -26539555 + AT_rich Low_complexity Low_complexity 1 28 0 4117 195 17 13 chr20 40128495 40129930 -26538075 + L1PB4 LINE L1 4721 6154 -2 490 328 25 25 chr20 40129949 40130275 -26537730 + HAL1b LINE L1 315 640 -708 41 21 0 0 chr20 40130695 40130743 -26537262 + AT_rich Low_complexity Low_complexity 1 48 0 418 224 120 49 chr20 40130812 40130995 -26537010 - L1M4 LINE L1 -1924 4222 4027 236 310 35 0 chr20 40131296 40131409 -26536596 - HAL1b LINE L1 -701 647 531 1404 226 20 31 chr20 40131438 40131828 -26536177 + MER63B DNA MER1_type 7 392 -44 265 324 19 0 chr20 40131828 40131936 -26536069 - HAL1b LINE L1 -833 515 406 456 288 63 49 chr20 40132556 40132841 -26535164 + L1MEd LINE L1 740 1028 -5091 * 479 322 139 53 chr20 40132827 40133150 -26534855 + L1MEd LINE L1 2653 2947 -3182 1913 128 10 24 chr20 40133150 40133446 -26534559 + AluSx SINE Alu 21 312 0 479 322 139 53 chr20 40133446 40133799 -26534206 + L1MEd LINE L1 2947 3387 -2742 540 142 41 53 chr20 40133818 40133987 -26534018 + Charlie5 DNA MER1_type 2382 2548 -64 570 295 38 19 chr20 40134253 40134463 -26533542 - MIR SINE MIR -36 226 13 383 328 113 36 chr20 40134754 40135114 -26532891 + L2 LINE L2 2723 3112 -160 576 252 200 68 chr20 40135331 40135787 -26532218 + MLT1H LTR MaLR 2 517 -32 23 0 0 0 chr20 40136829 40136852 -26531153 + AT_rich Low_complexity Low_complexity 1 23 0 785 277 36 5 chr20 40137213 40137437 -26530568 - MIR SINE MIR -20 242 12 272 27 27 0 chr20 40137992 40138029 -26529976 + (TTA)n Simple_repeat Simple_repeat 2 39 0 594 302 50 18 chr20 40138829 40139092 -26528913 + MIR SINE MIR 6 262 0 975 195 4 61 chr20 40139516 40139747 -26528258 + MER20 DNA MER1_type 2 219 0 205 310 0 0 chr20 40140622 40140680 -26527325 - L2 LINE L2 -19 3253 3196 259 200 0 0 chr20 40142090 40142135 -26525870 - MIR SINE MIR 0 262 218 635 270 177 55 chr20 40142428 40143015 -26524990 - L2 LINE L2 0 3313 2677 233 303 83 18 chr20 40143068 40143177 -26524828 - L2 LINE L2 -1 3312 3197 842 312 34 0 chr20 40144113 40144350 -26523655 + MIR SINE MIR 18 262 0 183 188 0 0 chr20 40144406 40144438 -26523567 - L2 LINE L2 -19 3294 3263 1043 217 9 5 chr20 40145353 40145570 -26522435 + MER20 DNA MER1_type 1 218 -1 237 255 28 19 chr20 40147267 40147373 -26520632 + (TTATA)n Simple_repeat Simple_repeat 1 107 0 1114 237 0 0 chr20 40147418 40147633 -26520372 + MER58A DNA MER1_type 9 223 -1 180 245 94 0 chr20 40147660 40147713 -26520292 + MIR3 SINE MIR 115 172 -36 580 301 25 0 chr20 40148852 40149015 -26518990 + MIR SINE MIR 6 172 -90 484 349 5 16 chr20 40149065 40149257 -26518748 - MIR SINE MIR -71 191 2 198 103 0 0 chr20 40149706 40149735 -26518270 + (CA)n Simple_repeat Simple_repeat 2 30 0 262 200 29 19 chr20 40149746 40149851 -26518154 + (TA)n Simple_repeat Simple_repeat 1 106 0 525 294 118 0 chr20 40150180 40150367 -26517638 - MIR SINE MIR -20 242 34 1009 108 12 6 chr20 40150613 40150780 -26517225 + (GGAA)n Simple_repeat Simple_repeat 4 171 0 409 324 131 9 chr20 40150901 40151222 -26516783 - MLT1L LTR MaLR -88 527 168 337 342 20 13 chr20 40151872 40152024 -26515981 + L2 LINE L2 3161 3313 0 526 341 22 0 chr20 40152612 40152791 -26515214 - MIR SINE MIR -49 213 31 369 261 28 21 chr20 40152815 40152957 -26515048 - LTR16C LTR ERVL 0 491 349 190 364 40 0 chr20 40153310 40153409 -26514596 - MIR SINE MIR -79 183 81 291 248 32 0 chr20 40153738 40153863 -26514142 + (TA)n Simple_repeat Simple_repeat 2 130 0 1654 132 106 7 chr20 40156091 40156364 -26511641 - AluSx SINE Alu -12 300 1 2719 250 74 55 chr20 40156792 40157680 -26510325 + Charlie7 DNA MER1_type 699 1626 -986 2280 89 0 3 chr20 40157680 40157971 -26510034 + AluSg SINE Alu 1 290 -20 2719 250 74 55 chr20 40157971 40158546 -26509459 + Charlie7 DNA MER1_type 1626 2189 -423 342 235 75 84 chr20 40158674 40158887 -26509118 - MLT1H1 LTR MaLR -195 395 185 717 181 0 0 chr20 40158905 40159043 -26508962 + CT-rich Low_complexity Low_complexity 1 138 0 1977 130 48 0 chr20 40159043 40159335 -26508670 - AluSc SINE Alu -3 306 1 362 320 41 0 chr20 40159341 40159463 -26508542 - MLT1H1 LTR MaLR -392 163 37 343 323 97 40 chr20 40159744 40159970 -26508035 - MIR SINE MIR -14 248 10 202 194 32 32 chr20 40159997 40160090 -26507915 + (TTATA)n Simple_repeat Simple_repeat 2 94 0 252 246 0 0 chr20 40160097 40160166 -26507839 + L1MC/D LINE L1 5768 5836 -1972 218 211 19 0 chr20 40160191 40160243 -26507762 + (CATA)n Simple_repeat Simple_repeat 2 54 0 195 100 0 0 chr20 40160511 40160541 -26507464 + (TC)n Simple_repeat Simple_repeat 1 30 0 866 19 9 0 chr20 40160577 40160685 -26507320 + (TAGA)n Simple_repeat Simple_repeat 1 109 0 554 287 63 30 chr20 40160722 40161022 -26506983 + LTR16C LTR ERVL 182 491 0 1068 234 23 75 chr20 40164793 40165178 -26502827 - MLT1A1 LTR MaLR 0 365 1 247 222 83 65 chr20 40167813 40167921 -26500084 - MIR SINE MIR -21 241 132 2622 23 7 7 chr20 40168014 40168324 -26499681 - AluY SINE Alu -1 310 1 295 191 16 0 chr20 40168797 40168860 -26499145 - MER97b DNA MER1_type? -944 109 46 382 349 8 0 chr20 40168938 40169067 -26498938 - MIR3 SINE MIR -27 181 52 336 347 66 6 chr20 40169562 40169729 -26498276 + MIR SINE MIR 32 208 -54 1221 68 6 0 chr20 40169856 40170019 -26497986 + L1MA1 LINE L1 6132 6295 -7 25 0 0 0 chr20 40170019 40170044 -26497961 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr20 40170498 40170526 -26497479 + AT_rich Low_complexity Low_complexity 1 28 0 737 206 25 84 chr20 40170856 40171142 -26496863 - LTR41 LTR ERVL -10 763 495 456 209 130 28 chr20 40171273 40171450 -26496555 - LTR41 LTR ERVL -578 195 1 326 236 139 42 chr20 40171639 40171783 -26496222 - L1ME4a LINE L1 -255 5866 5709 259 303 43 25 chr20 40171799 40171961 -26496044 - L1ME4a LINE L1 -463 5658 5494 22 80 0 0 chr20 40172282 40172332 -26495673 + AT_rich Low_complexity Low_complexity 1 50 0 329 349 68 5 chr20 40172400 40172592 -26495413 + L1M4 LINE L1 4030 4233 -1913 2472 97 21 19 chr20 40172660 40173033 -26494972 + THE1C LTR MaLR 2 375 0 423 0 0 0 chr20 40173805 40173852 -26494153 + (TG)n Simple_repeat Simple_repeat 1 47 0 426 283 130 11 chr20 40174398 40174575 -26493430 + MIR SINE MIR 37 234 -28 237 65 0 0 chr20 40174790 40174821 -26493184 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 202 283 17 0 chr20 40174822 40174882 -26493123 - L2 LINE L2 -11 3302 3242 183 156 0 0 chr20 40175232 40175264 -26492741 + A-rich Low_complexity Low_complexity 1 32 0 1717 262 70 64 chr20 40175707 40176367 -26491638 + L1ME3A LINE L1 5502 6165 -5 237 308 62 0 chr20 40176487 40176552 -26491453 - L2 LINE L2 -2 3270 3202 25 65 0 0 chr20 40177223 40177269 -26490736 + AT_rich Low_complexity Low_complexity 1 46 0 407 274 110 7 chr20 40177835 40177981 -26490024 - MIR SINE MIR -10 252 92 220 213 0 21 chr20 40178755 40178802 -26489203 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 372 269 85 80 chr20 40178923 40179135 -26488870 + MIR SINE MIR 5 217 -45 227 224 20 0 chr20 40179241 40179290 -26488715 + (CATATA)n Simple_repeat Simple_repeat 3 52 0 1501 185 8 20 chr20 40179291 40179429 -26488576 + MER34 LTR ERV1 1 139 -403 2424 84 3 25 chr20 40179429 40179749 -26488256 + AluSp SINE Alu 1 313 0 1501 185 8 20 chr20 40179749 40180108 -26487897 + MER34 LTR ERV1 139 542 0 264 111 0 0 chr20 40180144 40180189 -26487816 + (TG)n Simple_repeat Simple_repeat 2 46 0 545 171 0 0 chr20 40180208 40180290 -26487715 + Tigger3(Golem) DNA MER2_type 1 82 -2947 3461 136 136 25 chr20 40180306 40180376 -26487629 + Tigger3(Golem) DNA MER2_type 2271 2332 -697 2328 105 0 7 chr20 40180376 40180682 -26487323 - AluSg SINE Alu -6 304 1 3461 136 136 25 chr20 40180682 40180948 -26487057 + Tigger3(Golem) DNA MER2_type 2332 2567 -462 203 61 30 0 chr20 40180948 40180981 -26487024 + (CTCA)n Simple_repeat Simple_repeat 1 34 0 3461 136 136 25 chr20 40180981 40181326 -26486679 + Tigger3(Golem) DNA MER2_type 2567 3029 0 32 0 0 0 chr20 40181431 40181463 -26486542 + AT_rich Low_complexity Low_complexity 1 32 0 224 321 119 28 chr20 40181493 40181602 -26486403 - L2 LINE L2 -1 3271 3153 202 288 25 25 chr20 40182268 40182348 -26485657 - MIR SINE MIR -102 160 81 310 102 20 0 chr20 40183816 40183865 -26484140 - L1ME3A LINE L1 -94 6076 6027 217 319 14 14 chr20 40184513 40184585 -26483420 + L2 LINE L2 3142 3213 -59 228 263 70 13 chr20 40184633 40184739 -26483266 + MIR SINE MIR 38 153 -64 377 314 83 18 chr20 40185742 40185911 -26482094 - MIR SINE MIR -60 202 23 193 244 76 50 chr20 40186628 40186747 -26481258 + MIR SINE MIR 20 141 -121 537 239 130 11 chr20 40186911 40187095 -26480910 + MIR SINE MIR 29 234 -28 530 207 0 167 chr20 40187184 40187382 -26480623 - MER63A DNA MER1_type -19 191 27 2297 104 0 0 chr20 40187394 40187693 -26480312 + AluSx SINE Alu 3 301 -11 1742 238 47 31 chr20 40187727 40188177 -26479828 - LTR16A1 LTR ERVL 0 457 1 520 301 70 53 chr20 40188270 40188569 -26479436 - L2 LINE L2 -2 3311 3008 3565 69 2 7 chr20 40188866 40189316 -26478689 + LTR7 LTR ERV1 1 448 -2 20316 99 21 8 chr20 40189318 40192266 -26475739 + HERVH LTR ERV1 1 2987 -4726 920 135 20 0 chr20 40192260 40192408 -26475597 + HERVH LTR ERV1 3140 3290 -4423 * 3023 110 84 2 chr20 40192398 40192862 -26475143 + HERVH LTR ERV1 3492 3993 -3720 4371 149 0 3 chr20 40192864 40193528 -26474477 + HERVH LTR ERV1 4488 5149 -2564 1425 115 23 9 chr20 40193529 40193746 -26474259 + HERVH LTR ERV1 5600 5819 -1894 * 2546 87 45 13 chr20 40193744 40194124 -26473881 + HERVH LTR ERV1 7322 7713 0 3695 53 2 7 chr20 40194124 40194574 -26473431 + LTR7 LTR ERV1 1 448 -2 183 235 0 0 chr20 40194787 40194838 -26473167 + (TG)n Simple_repeat Simple_repeat 2 52 0 211 183 17 33 chr20 40194877 40194937 -26473068 + (TG)n Simple_repeat Simple_repeat 1 59 0 191 35 0 35 chr20 40195596 40195625 -26472380 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 2329 84 0 13 chr20 40197279 40197577 -26470428 + AluSc SINE Alu 1 294 -15 195 276 294 18 chr20 40198127 40198297 -26469708 - MIR SINE MIR -6 256 40 219 114 0 0 chr20 40199473 40199508 -26468497 + (T)n Simple_repeat Simple_repeat 1 35 0 260 344 56 0 chr20 40199675 40199800 -26468205 + MIR SINE MIR 91 222 -40 2011 127 3 17 chr20 40200060 40200359 -26467646 - AluSx SINE Alu -9 303 9 196 345 24 0 chr20 40200797 40200881 -26467124 - L2 LINE L2 -1 3312 3227 2198 106 0 31 chr20 40200914 40201235 -26466770 + AluSx SINE Alu 2 312 0 185 0 40 0 chr20 40201382 40201407 -26466598 + (TTG)n Simple_repeat Simple_repeat 2 27 0 320 338 12 0 chr20 40201437 40201517 -26466488 - L2 LINE L2 -55 3217 3137 1086 256 53 43 chr20 40201559 40201958 -26466047 - L2 LINE L2 0 3313 2911 432 245 148 6 chr20 40202634 40202830 -26465175 + MIR SINE MIR 37 257 -5 1019 231 23 14 chr20 40202864 40203085 -26464920 + MER58A DNA MER1_type 1 223 -1 716 303 39 8 chr20 40203103 40203357 -26464648 + MIR SINE MIR 1 262 0 199 318 141 0 chr20 40206181 40206266 -26461739 - L2 LINE L2 -40 3232 3136 542 287 133 5 chr20 40206358 40206553 -26461452 + MIR SINE MIR 3 222 -40 253 268 24 0 chr20 40206593 40206677 -26461328 - MIR SINE MIR -63 145 82 582 328 26 22 chr20 40207784 40208013 -26459992 - MIR SINE MIR 0 262 33 225 308 42 17 chr20 40208236 40208356 -26459649 + MIR SINE MIR 31 153 -109 223 348 43 0 chr20 40208422 40208537 -26459468 + L2 LINE L2 3190 3309 -4 363 335 126 5 chr20 40209724 40209939 -26458066 - MIR SINE MIR -6 256 16 365 300 47 13 chr20 40210387 40210537 -26457468 - MIR3 SINE MIR -19 189 35 1739 228 20 22 chr20 40210594 40211045 -26456960 - L1MB7 LINE L1 -9 6175 5726 416 248 131 13 chr20 40211045 40211198 -26456807 + MER117 DNA MER1_type 7 177 -20 22 56 0 0 chr20 40211577 40211613 -26456392 + AT_rich Low_complexity Low_complexity 1 36 0 227 254 0 0 chr20 40211851 40211906 -26456099 + GA-rich Low_complexity Low_complexity 1 55 0 921 86 0 0 chr20 40212101 40212217 -26455788 + L1PA7 LINE L1 6039 6154 0 3642 78 4 0 chr20 40212284 40212744 -26455261 + L1PA7 LINE L1 5691 6152 -2 264 347 0 10 chr20 40212763 40212861 -26455144 + Charlie8 DNA MER1_type 185 281 -2136 233 259 47 0 chr20 40212956 40213041 -26454964 - MIR SINE MIR -110 152 64 302 359 8 0 chr20 40214684 40214812 -26453193 + L2 LINE L2 2531 2659 -655 6232 260 62 22 chr20 40214948 40217952 -26450053 + L1MEc LINE L1 1624 4704 -1511 21 0 0 0 chr20 40218016 40218037 -26449968 + AT_rich Low_complexity Low_complexity 1 21 0 496 123 30 30 chr20 40218040 40218346 -26449659 + (TTATA)n Simple_repeat Simple_repeat 1 306 0 426 35 126 0 chr20 40218349 40218492 -26449513 + (TA)n Simple_repeat Simple_repeat 1 161 0 183 348 45 11 chr20 40219071 40219160 -26448845 - L3 LINE CR1 -481 1096 1005 1495 284 34 14 chr20 40219781 40220196 -26447809 - MLT1G1 LTR MaLR -170 425 3 225 350 0 0 chr20 40220511 40220614 -26447391 - MER117 DNA MER1_type -91 106 4 751 35 0 0 chr20 40221579 40221665 -26446340 - L1PA7 LINE L1 -8 6146 6061 243 248 0 40 chr20 40221895 40222020 -26445985 + GA-rich Low_complexity Low_complexity 1 120 0 23 0 0 0 chr20 40222143 40222166 -26445839 + AT_rich Low_complexity Low_complexity 1 23 0 1835 138 33 16 chr20 40222509 40222814 -26445191 + AluSx SINE Alu 1 310 -2 510 284 76 28 chr20 40222860 40223110 -26444895 + L1MC2 LINE L1 5535 5796 -325 32 67 0 0 chr20 40223246 40223306 -26444699 + AT_rich Low_complexity Low_complexity 1 60 0 481 146 21 0 chr20 40223726 40223822 -26444183 - L1PA16 LINE L1 0 6166 6069 21 0 0 0 chr20 40224893 40224914 -26443091 + AT_rich Low_complexity Low_complexity 1 21 0 258 254 30 0 chr20 40224970 40225037 -26442968 + MIR SINE MIR 190 258 -4 292 267 114 15 chr20 40225620 40225751 -26442254 - MIR3 SINE MIR -24 184 41 282 224 17 0 chr20 40226695 40226753 -26441252 + MIR SINE MIR 123 181 -81 264 170 0 0 chr20 40228445 40228498 -26439507 + (TG)n Simple_repeat Simple_repeat 1 53 0 2196 175 49 57 chr20 40228509 40228842 -26439163 + L1MC2 LINE L1 5832 6162 -182 1937 143 7 0 chr20 40228842 40229154 -26438851 + AluSx SINE Alu 1 314 0 2196 175 49 57 chr20 40229154 40229328 -26438677 + L1MC2 LINE L1 6162 6336 -8 197 354 165 0 chr20 40229920 40230047 -26437958 + L2 LINE L2 2594 2741 -573 180 351 14 0 chr20 40230371 40230445 -26437560 - L2 LINE L2 -302 2970 2896 352 288 83 8 chr20 40230684 40230816 -26437189 - MIR SINE MIR -74 188 47 432 0 0 0 chr20 40230957 40231005 -26437000 + (TA)n Simple_repeat Simple_repeat 1 48 0 211 269 86 65 chr20 40231017 40231110 -26436895 - MIR SINE MIR -5 257 163 297 234 51 68 chr20 40231115 40231310 -26436695 + MLT1I LTR MaLR 1 141 -268 336 214 145 17 chr20 40231333 40231450 -26436555 + MLT1I LTR MaLR 251 382 -27 250 314 74 25 chr20 40231474 40231595 -26436410 - MIR SINE MIR -121 141 15 435 354 71 28 chr20 40231828 40232174 -26435831 + L2 LINE L2 2615 2996 -276 327 251 63 57 chr20 40232201 40232376 -26435629 + MLT1J1 LTR MaLR 21 196 -250 457 292 36 41 chr20 40232406 40232625 -26435380 + L2 LINE L2 3096 3313 0 309 197 132 0 chr20 40232643 40232719 -26435286 + MIR SINE MIR 166 251 -11 485 334 63 65 chr20 40233036 40233449 -26434556 - L2 LINE L2 -1 3271 2860 884 335 80 50 chr20 40234353 40234905 -26433100 + L2 LINE L2 2496 3076 -237 1998 118 21 0 chr20 40234905 40235193 -26432812 - AluSg1 SINE Alu -15 294 1 884 335 80 50 chr20 40235193 40235407 -26432598 + L2 LINE L2 3076 3282 -31 477 76 0 0 chr20 40235438 40235504 -26432501 + (TGAA)n Simple_repeat Simple_repeat 3 68 0 482 308 30 30 chr20 40236405 40236603 -26431402 + MIR SINE MIR 3 200 -62 693 298 48 8 chr20 40236863 40237111 -26430894 + LTR16C LTR ERVL 234 491 0 327 296 26 17 chr20 40238282 40238397 -26429608 + MIR SINE MIR 3 118 -144 1801 249 63 45 chr20 40238399 40238600 -26429405 + MLT1G LTR MaLR 10 206 -384 1930 153 52 36 chr20 40238600 40238965 -26429040 - THE1C LTR MaLR 0 375 5 1801 249 63 45 chr20 40238965 40239334 -26428671 + MLT1G LTR MaLR 206 590 0 364 254 192 15 chr20 40239335 40239465 -26428540 + MIR SINE MIR 110 262 0 467 261 191 0 chr20 40241089 40241246 -26426759 + MIR SINE MIR 47 233 -29 2395 82 0 3 chr20 40241285 40241588 -26426417 - AluY SINE Alu -9 302 1 2212 122 0 0 chr20 40241780 40242074 -26425931 - AluSx SINE Alu -8 304 11 198 294 88 0 chr20 40242084 40242152 -26425853 + L2 LINE L2 3115 3188 -84 270 320 66 86 chr20 40242249 40242658 -26425347 - L2 LINE L2 -62 3251 2851 926 200 0 27 chr20 40242771 40242956 -26425049 + MER58A DNA MER1_type 45 224 0 189 291 0 36 chr20 40242966 40243021 -26424984 - L2 LINE L2 -552 2762 2710 252 250 17 0 chr20 40243024 40243084 -26424921 + L2 LINE L2 3212 3272 0 2152 111 3 7 chr20 40243810 40244107 -26423898 + AluSc SINE Alu 1 296 -13 1093 265 53 56 chr20 40244254 40244376 -26423629 - MLT1C LTR MaLR -117 388 267 1764 118 23 0 chr20 40244376 40244639 -26423366 - L1MA2 LINE L1 0 6304 6036 1093 265 53 56 chr20 40244639 40244930 -26423075 - MLT1C LTR MaLR -238 267 7 207 100 0 0 chr20 40245424 40245454 -26422551 + (TAA)n Simple_repeat Simple_repeat 1 30 0 563 245 155 0 chr20 40245754 40245909 -26422096 - MER5A DNA MER1_type -7 182 4 552 245 192 24 chr20 40247020 40247228 -26420777 + MIR SINE MIR 20 262 0 230 279 33 116 chr20 40247442 40247657 -26420348 + MER117 DNA MER1_type 1 197 0 208 402 17 8 chr20 40247671 40247788 -26420217 + MIR SINE MIR 21 138 -70 206 119 48 0 chr20 40247898 40247940 -26420065 + CT-rich Low_complexity Low_complexity 3 46 0 236 293 27 0 chr20 40248207 40248282 -26419723 - L2 LINE L2 -3 3310 3234 361 349 10 36 chr20 40248679 40248871 -26419134 + MER5A DNA MER1_type 1 187 -2 187 237 26 0 chr20 40248926 40248964 -26419041 - L2 LINE L2 -19 3253 3215 252 111 0 0 chr20 40250217 40250262 -26417743 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 537 293 31 40 chr20 40250388 40250610 -26417395 - MIR SINE MIR -33 229 10 1339 189 53 13 chr20 40250764 40251066 -26416939 - MER33 DNA MER1_type -5 319 6 194 268 10 82 chr20 40251848 40251945 -26416060 - MIR SINE MIR -10 252 163 * 378 278 84 60 chr20 40251903 40252202 -26415803 + L2 LINE L2 2653 2958 -356 284 337 20 20 chr20 40252642 40252743 -26415262 - MIR SINE MIR -107 155 55 182 367 34 11 chr20 40253048 40253225 -26414780 + L2 LINE L2 2494 2674 -640 185 324 29 0 chr20 40253551 40253619 -26414386 + MER5A DNA MER1_type 21 90 -99 4254 159 43 36 chr20 40253635 40253942 -26414063 - L1MA9 LINE L1 -42 6270 5967 228 35 0 0 chr20 40253942 40253971 -26414034 + (TTG)n Simple_repeat Simple_repeat 2 30 0 4254 159 43 36 chr20 40253971 40254522 -26413483 - L1MA9 LINE L1 -345 5967 5406 250 298 41 53 chr20 40254656 40254827 -26413178 + L2 LINE L2 2916 3084 -188 214 363 60 12 chr20 40255003 40255171 -26412834 - MIR SINE MIR -56 206 31 248 351 132 0 chr20 40256059 40256173 -26411832 - L2 LINE L2 -7 3265 3137 664 289 57 41 chr20 40256300 40256546 -26411459 - MLT1K LTR MaLR -337 251 2 336 309 0 65 chr20 40258320 40258443 -26409562 + L2 LINE L2 3199 3313 0 246 270 14 54 chr20 40258829 40258903 -26409102 - MER5B DNA MER1_type -49 129 59 481 272 124 49 chr20 40259086 40259394 -26408611 + LTR16A1 LTR ERVL 156 457 0 403 302 86 74 chr20 40260513 40260957 -26407048 + L1M4 LINE L1 3868 4316 -1830 199 394 0 0 chr20 40261032 40261098 -26406907 - MIR3 SINE MIR -53 155 90 1621 168 7 14 chr20 40261485 40261780 -26406225 + L1M2a LINE L1 1 348 -6743 3300 254 72 33 chr20 40261786 40264385 -26403620 + L1M2a LINE L1 1095 3479 -3688 284 228 25 0 chr20 40264374 40264453 -26403552 + L1MC4 LINE L1 6617 6697 -1345 * 2166 154 21 10 chr20 40264476 40264859 -26403146 + L1MA9 LINE L1 5320 5706 -585 888 182 0 0 chr20 40264882 40265025 -26402980 + L1M1 LINE L1 1572 1714 -5851 937 154 51 75 chr20 40265043 40265127 -26402878 + L1MA9 LINE L1 5699 5783 -508 333 0 0 0 chr20 40265127 40265164 -26402841 + (CA)n Simple_repeat Simple_repeat 2 38 0 937 154 51 75 chr20 40265164 40265293 -26402712 + L1MA9 LINE L1 5783 5907 -384 * 16930 151 18 25 chr20 40265292 40267375 -26400630 + L1MA2 LINE L1 964 3061 -4662 2330 110 0 0 chr20 40267375 40267675 -26400330 + AluY SINE Alu 1 300 -11 16930 151 18 25 chr20 40267675 40272407 -26395598 + L1MA2 LINE L1 3061 7723 0 1999 144 56 39 chr20 40272420 40272830 -26395175 + L1MA9 LINE L1 5894 6310 -2 565 276 82 15 chr20 40273228 40273424 -26394581 - MIR SINE MIR -14 248 40 319 294 0 59 chr20 40275008 40275110 -26392895 - L2 LINE L2 -182 3090 2995 330 302 47 30 chr20 40275241 40275473 -26392532 - L2 LINE L2 -556 2758 2523 2240 196 99 11 chr20 40275521 40275985 -26392020 + MLT1D LTR MaLR 1 505 0 278 341 45 68 chr20 40276612 40276832 -26391173 + MIR SINE MIR 21 235 -27 411 301 182 30 chr20 40278031 40278300 -26389705 + L2 LINE L2 3002 3311 -2 186 43 0 0 chr20 40278300 40278323 -26389682 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 303 164 0 0 chr20 40278555 40278616 -26389389 + (CA)n Simple_repeat Simple_repeat 1 61 0 1095 181 23 19 chr20 40278656 40278871 -26389134 + MER20 DNA MER1_type 3 218 -1 416 267 29 10 chr20 40279106 40279241 -26388764 - MIR SINE MIR -63 145 9 189 0 0 0 chr20 40279410 40279431 -26388574 + (CTG)n Simple_repeat Simple_repeat 3 23 0 471 302 8 8 chr20 40280003 40280129 -26387876 - L2 LINE L2 0 3272 3147 639 198 91 153 chr20 40280549 40280908 -26387097 - Charlie2 DNA MER1_type -118 2744 2453 1001 82 7 7 chr20 40280908 40281053 -26386952 + L1PA13 LINE L1 6013 6158 -5 639 198 91 153 chr20 40281053 40281440 -26386565 - Charlie2 DNA MER1_type -409 2453 2044 327 288 167 39 chr20 40281485 40281766 -26386239 - Charlie2 DNA MER1_type -2465 317 1 375 283 12 54 chr20 40282020 40282186 -26385819 - L2 LINE L2 -203 3069 2911 182 275 107 69 chr20 40282329 40282460 -26385545 - L3 LINE CR1 -495 1082 947 193 335 151 45 chr20 40283372 40283551 -26384454 + L2 LINE L2 3075 3272 0 199 263 0 0 chr20 40284697 40284735 -26383270 - L2 LINE L2 -97 3175 3138 551 328 26 54 chr20 40284923 40285313 -26382692 - MLT1J2 LTR MaLR -42 408 30 23 33 0 0 chr20 40286112 40286142 -26381863 + AT_rich Low_complexity Low_complexity 1 30 0 300 254 213 8 chr20 40286149 40286271 -26381734 - HAL1b LINE L1 0 1348 1202 204 40 0 0 chr20 40286280 40286305 -26381700 + (GGAA)n Simple_repeat Simple_repeat 1 25 0 358 237 68 68 chr20 40286537 40286655 -26381350 - L2 LINE L2 0 3313 3196 362 245 118 10 chr20 40286690 40286792 -26381213 - MER5A DNA MER1_type -76 113 1 2385 100 3 0 chr20 40287563 40287872 -26380133 - AluSp SINE Alu -3 310 1 639 106 37 170 chr20 40288614 40288832 -26379173 + MER53 DNA DNA 1 189 0 407 335 89 36 chr20 40289260 40289484 -26378521 + L2 LINE L2 3033 3268 -4 387 0 0 0 chr20 40289502 40289545 -26378460 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 1236 240 43 39 chr20 40289600 40290067 -26377938 + L1ME2 LINE L1 5684 6152 -12 323 266 34 77 chr20 40290107 40290314 -26377691 + L1MC4 LINE L1 7830 8027 -15 208 289 0 0 chr20 40291195 40291247 -26376758 + L3 LINE CR1 1423 1474 -103 1543 178 100 25 chr20 40291290 40291650 -26376355 + MLT1B LTR MaLR 4 390 0 250 376 10 0 chr20 40291711 40291812 -26376193 + MER5B DNA MER1_type 1 102 -76 220 326 54 0 chr20 40291851 40291943 -26376062 + L2 LINE L2 3200 3296 -17 270 278 0 98 chr20 40291988 40292121 -26375884 + L2 LINE L2 3194 3313 0 226 281 62 0 chr20 40292262 40292358 -26375647 - L1ME4a LINE L1 -43 6078 5977 546 103 0 0 chr20 40292631 40292709 -26375296 + MADE1 DNA Mariner 1 78 -2 317 233 47 33 chr20 40293017 40293167 -26374838 - L1ME4a LINE L1 -3 6118 5967 218 143 54 18 chr20 40293402 40293458 -26374547 + (TA)n Simple_repeat Simple_repeat 2 59 0 1374 185 53 48 chr20 40293821 40294215 -26373790 - L1MD1 LINE L1 -7 6629 6234 1562 277 51 32 chr20 40294262 40294815 -26373190 + MLT1E LTR MaLR 1 563 -30 914 285 88 38 chr20 40294885 40296117 -26371888 - L1MD1 LINE L1 -345 6211 4910 1621 170 68 99 chr20 40296124 40296607 -26371398 + MLT1D LTR MaLR 14 481 -24 228 67 0 0 chr20 40296620 40296650 -26371355 + (TAGG)n Simple_repeat Simple_repeat 2 31 0 326 287 42 63 chr20 40296773 40297010 -26370995 - L1MD1 LINE L1 -3328 3212 2981 603 265 187 19 chr20 40297012 40297463 -26370542 - L1MD1 LINE L1 -3578 2962 2434 1874 154 0 37 chr20 40297756 40298080 -26369925 + AluJb SINE Alu 1 312 0 315 317 33 21 chr20 40298168 40298447 -26369558 - L1MD1 LINE L1 -838 2063 1716 341 258 54 115 chr20 40298453 40298748 -26369257 - L1MD1 LINE L1 -5096 1434 1158 1197 248 56 52 chr20 40299047 40299323 -26368682 - L1ME3 LINE L1 -2 6160 5877 1973 80 94 7 chr20 40299323 40299599 -26368406 - AluSc SINE Alu -9 300 1 1197 248 56 52 chr20 40299599 40299825 -26368180 - L1ME3 LINE L1 -285 5877 5653 333 317 25 46 chr20 40299889 40300129 -26367876 - L1MC4a LINE L1 -104 6017 5781 216 330 0 10 chr20 40300727 40300824 -26367181 + CT-rich Low_complexity Low_complexity 1 96 0 2727 20 10 0 chr20 40301488 40301794 -26366211 - AluYa5 SINE Alu -2 309 1 826 273 18 0 chr20 40301893 40302113 -26365892 - MER58A DNA MER1_type 0 224 1 222 310 14 0 chr20 40302830 40302901 -26365104 - L2 LINE L2 0 3313 3242 846 303 180 43 chr20 40302945 40303194 -26364811 - L2 LINE L2 -237 3076 2862 2084 115 0 50 chr20 40303194 40303515 -26364490 + AluSq SINE Alu 1 305 -8 846 303 180 43 chr20 40303515 40303947 -26364058 - L2 LINE L2 -451 2862 2306 855 272 55 4 chr20 40304353 40304693 -26363312 + LTR16C LTR ERVL 97 491 0 252 184 125 22 chr20 40304777 40304913 -26363092 - L1ME4a LINE L1 -8 6113 5964 195 247 134 31 chr20 40305719 40305816 -26362189 - L2 LINE L2 -10 3262 3156 399 41 0 0 chr20 40306625 40306674 -26361331 + (GA)n Simple_repeat Simple_repeat 2 50 0 944 257 67 63 chr20 40307433 40307729 -26360276 + MLT1H LTR MaLR 61 361 -188 2118 135 3 0 chr20 40307729 40308025 -26359980 - AluSq SINE Alu -16 297 1 944 257 67 63 chr20 40308025 40308207 -26359798 + MLT1H LTR MaLR 361 541 -8 907 177 68 5 chr20 40309354 40309546 -26358459 - MLT2F LTR ERVL -2 661 458 3827 168 45 29 chr20 40309546 40310435 -26357570 + L1MB7 LINE L1 5279 6181 -3 827 245 31 6 chr20 40310453 40310831 -26357174 - MLT2F LTR ERVL -230 433 1 2163 71 4 0 chr20 40311263 40311558 -26356447 + AluY SINE Alu 13 308 0 213 154 0 0 chr20 40312606 40312645 -26355360 + (TG)n Simple_repeat Simple_repeat 2 40 0 579 246 63 0 chr20 40312835 40313010 -26354995 - MER119 DNA MER1_type -6 577 392 238 294 24 0 chr20 40313278 40313363 -26354642 + L2 LINE L2 3227 3313 0 244 266 0 25 chr20 40313430 40313509 -26354496 + (CATATA)n Simple_repeat Simple_repeat 5 81 0 509 274 0 35 chr20 40313564 40313677 -26354328 - MIR SINE MIR -145 117 9 262 244 130 57 chr20 40314152 40314275 -26353730 + MIR3 SINE MIR 37 168 -40 330 319 91 26 chr20 40314569 40314791 -26353214 - MIR SINE MIR -21 241 1 442 186 245 0 chr20 40314944 40315046 -26352959 + FLAM_C SINE Alu 3 129 -14 479 245 28 28 chr20 40315342 40315485 -26352520 - LTR16B LTR ERVL -7 457 315 313 388 50 0 chr20 40316063 40316184 -26351821 - L2 LINE L2 -3 3269 3143 240 254 0 0 chr20 40316985 40317040 -26350965 - MLT1K LTR MaLR -342 246 192 257 255 39 29 chr20 40317849 40317951 -26350054 + L2 LINE L2 2953 3055 -217 2569 58 0 0 chr20 40318123 40318434 -26349571 + AluY SINE Alu 1 311 0 468 0 0 0 chr20 40319030 40319082 -26348923 + (TA)n Simple_repeat Simple_repeat 1 52 0 1533 206 10 32 chr20 40319210 40319520 -26348485 - AluJo SINE Alu -9 303 1 183 129 0 0 chr20 40319629 40319660 -26348345 + (TC)n Simple_repeat Simple_repeat 1 31 0 4342 144 1 1 chr20 40320435 40321123 -26346882 - L1PA16 LINE L1 -10 6156 5469 2270 148 5 13 chr20 40321359 40321737 -26346268 + THE1C LTR MaLR 1 375 0 443 237 37 30 chr20 40321737 40321872 -26346133 - MIR SINE MIR -40 222 87 402 274 89 12 chr20 40322321 40322629 -26345376 + MLT1J1 LTR MaLR 55 446 0 317 206 0 0 chr20 40323089 40323157 -26344848 - MER112 DNA MER1_type -89 171 104 519 148 0 0 chr20 40323324 40323412 -26344593 + (TCCA)n Simple_repeat Simple_repeat 1 88 0 244 265 0 0 chr20 40323449 40323517 -26344488 - MER112 DNA MER1_type -185 75 8 2270 100 13 10 chr20 40323690 40323999 -26344006 - AluSg SINE Alu 0 310 1 209 171 0 0 chr20 40324369 40324404 -26343601 - L2 LINE L2 -12 3301 3267 287 326 87 94 chr20 40324879 40325455 -26342550 + L2 LINE L2 2694 3269 -3 475 290 157 3 chr20 40326058 40326273 -26341732 - MIR SINE MIR -1 261 14 183 129 0 0 chr20 40326547 40326578 -26341427 + (TCTA)n Simple_repeat Simple_repeat 2 32 0 2460 68 0 0 chr20 40328508 40328804 -26339201 + AluY SINE Alu 1 296 -15 542 282 58 0 chr20 40328877 40329033 -26338972 - MIR SINE MIR -86 176 12 189 159 0 0 chr20 40329469 40329513 -26338492 + T-rich Low_complexity Low_complexity 2 45 0 608 218 109 57 chr20 40330682 40330930 -26337075 + MIR SINE MIR 1 261 -1 328 279 33 4 chr20 40331817 40331955 -26336050 + MIR SINE MIR 15 152 -70 2112 108 3 3 chr20 40332549 40332845 -26335160 + AluY SINE Alu 1 296 -15 24 53 0 0 chr20 40333391 40333429 -26334576 + AT_rich Low_complexity Low_complexity 1 38 0 736 263 61 0 chr20 40334013 40334211 -26333794 - MER63A DNA MER1_type 0 210 1 232 259 0 17 chr20 40334374 40334432 -26333573 + GA-rich Low_complexity Low_complexity 1 57 0 722 322 92 29 chr20 40335294 40335929 -26332076 - L2 LINE L2 0 3313 2630 345 203 0 0 chr20 40336083 40336147 -26331858 + MIR SINE MIR 78 141 -67 21 36 0 0 chr20 40336451 40336479 -26331526 + AT_rich Low_complexity Low_complexity 1 28 0 317 203 24 0 chr20 40336558 40336651 -26331354 + L1ME3 LINE L1 5264 5355 -1004 873 301 65 8 chr20 40336768 40337153 -26330852 + L1ME3 LINE L1 5352 5758 -406 1803 174 0 13 chr20 40337205 40337510 -26330495 + AluSx SINE Alu 1 301 -11 282 264 8 16 chr20 40337653 40337774 -26330231 + L1ME3 LINE L1 6037 6156 -6 2122 108 0 0 chr20 40337823 40338100 -26329905 - AluSc SINE Alu -32 277 1 1109 172 29 70 chr20 40338423 40338793 -26329212 + MLT2B1 LTR ERVL 1 350 -64 359 185 0 9 chr20 40338796 40338904 -26329101 + (TAGA)n Simple_repeat Simple_repeat 1 107 0 262 211 0 115 chr20 40338909 40339013 -26328992 + L1MC4 LINE L1 6614 6705 -1337 279 133 0 0 chr20 40339031 40339076 -26328929 + MLT2B1 LTR ERVL 419 463 -1 3049 229 170 15 chr20 40339556 40340536 -26327469 + L1MC4 LINE L1 6768 7899 -143 347 264 161 55 chr20 40340739 40341118 -26326887 + L1ME4a LINE L1 5468 5886 -235 522 309 11 63 chr20 40341218 40341487 -26326518 + MLT1H LTR MaLR 97 351 -198 240 273 20 0 chr20 40341609 40341708 -26326297 + L1ME4a LINE L1 6005 6105 -16 316 294 49 54 chr20 40341831 40342035 -26325970 - MIR SINE MIR -13 249 47 1420 270 111 15 chr20 40342238 40342715 -26325290 + MLT1G1 LTR MaLR 73 595 0 204 241 0 0 chr20 40342737 40342795 -26325210 + GA-rich Low_complexity Low_complexity 4 61 0 550 246 43 101 chr20 40343470 40343677 -26324328 + LTR33A LTR ERVL 1 195 -328 549 136 0 0 chr20 40344237 40344340 -26323665 + (TCCA)n Simple_repeat Simple_repeat 1 103 0 195 236 28 56 chr20 40344417 40344489 -26323516 + MIR SINE MIR 65 134 -128 443 319 6 12 chr20 40344515 40344681 -26323324 + MIR SINE MIR 97 261 -1 309 26 0 0 chr20 40344681 40344719 -26323286 + (ATG)n Simple_repeat Simple_repeat 3 40 0 * 376 190 10 10 chr20 40344717 40344817 -26323188 + GA-rich Low_complexity Low_complexity 2 101 0 2397 87 0 3 chr20 40345634 40345944 -26322061 - AluSc SINE Alu 0 309 1 23 0 0 0 chr20 40346506 40346529 -26321476 + AT_rich Low_complexity Low_complexity 1 23 0 1261 150 4 77 chr20 40346544 40346790 -26321215 + AluJo SINE Alu 74 301 -11 228 224 0 52 chr20 40346792 40346850 -26321155 + GA-rich Low_complexity Low_complexity 6 60 0 1526 240 36 47 chr20 40346866 40347361 -26320644 - MLT1D LTR MaLR -15 490 1 321 304 0 73 chr20 40347381 40347478 -26320527 + MER5A DNA MER1_type 12 90 -99 2057 123 20 3 chr20 40347478 40347771 -26320234 - AluSq SINE Alu -15 298 1 321 304 0 73 chr20 40347771 40347864 -26320141 + MER5A DNA MER1_type 90 188 -1 1547 103 0 13 chr20 40348571 40348803 -26319202 + L1PA11 LINE L1 5946 6174 0 281 268 98 20 chr20 40348810 40348963 -26319042 - MIR SINE MIR -42 220 56 2061 196 51 5 chr20 40349383 40349796 -26318209 - MSTB1 LTR MaLR 0 432 1 378 171 43 0 chr20 40349819 40349889 -26318116 + MER116 DNA Mariner 6 78 -2 1988 142 6 22 chr20 40349957 40350273 -26317732 + AluSq SINE Alu 1 311 -2 204 40 0 0 chr20 40350291 40350316 -26317689 + (GAAA)n Simple_repeat Simple_repeat 3 27 0 372 297 19 34 chr20 40350476 40350685 -26317320 - L1MC4 LINE L1 -5 8037 7832 334 301 133 14 chr20 40350886 40351172 -26316833 - L2 LINE L2 -653 2661 2342 2195 138 0 0 chr20 40351213 40351525 -26316480 + AluJo SINE Alu 1 312 0 235 156 16 62 chr20 40353728 40353792 -26314213 + Looper DNA T2_type 149 209 -1349 282 259 31 0 chr20 40353793 40353896 -26314109 - L1MD2 LINE L1 -82 7726 6203 1182 244 86 41 chr20 40354229 40354671 -26313334 + MLT1C LTR MaLR 6 467 0 232 280 32 11 chr20 40354791 40354884 -26313121 - MIR SINE MIR -119 143 49 189 0 0 0 chr20 40355402 40355423 -26312582 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 425 311 71 76 chr20 40355500 40356076 -26311929 - L1ME4a LINE L1 -94 6027 5444 239 228 36 48 chr20 40356122 40356219 -26311786 + L1ME3A LINE L1 6071 6170 0 2138 114 3 3 chr20 40356222 40356521 -26311484 + AluSx SINE Alu 1 299 -13 707 280 54 57 chr20 40356700 40357071 -26310934 - L2 LINE L2 -420 2894 2525 2230 130 0 3 chr20 40358378 40358685 -26309320 - AluSg SINE Alu -4 306 1 513 255 81 37 chr20 40358765 40359087 -26308918 + L1MC4a LINE L1 5613 5948 -1860 38 0 0 0 chr20 40359276 40359314 -26308691 + AT_rich Low_complexity Low_complexity 1 38 0 624 180 55 16 chr20 40359897 40360025 -26307980 + L1ME3A LINE L1 6030 6162 -8 2325 104 0 0 chr20 40360383 40360682 -26307323 - AluSx SINE Alu -13 299 1 230 316 44 52 chr20 40360860 40360996 -26307009 + MER5A DNA MER1_type 7 141 -48 274 319 76 17 chr20 40361114 40361233 -26306772 + L2 LINE L2 3133 3258 -14 225 0 0 0 chr20 40361234 40361259 -26306746 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 364 307 80 6 chr20 40361611 40361774 -26306231 + MIR SINE MIR 3 177 -85 332 278 30 53 chr20 40361786 40361919 -26306086 - L2 LINE L2 -2 3311 3182 216 0 0 0 chr20 40362683 40362707 -26305298 + (TG)n Simple_repeat Simple_repeat 1 24 0 585 291 81 9 chr20 40364845 40365068 -26302937 - MIR SINE MIR -15 247 9 241 289 74 30 chr20 40365111 40365246 -26302759 + L1ME4a LINE L1 5522 5662 -504 344 302 97 35 chr20 40365295 40365404 -26302601 + L1ME4a LINE L1 5669 5770 -351 2542 62 0 3 chr20 40365404 40365710 -26302295 + AluY SINE Alu 1 305 -6 344 302 97 35 chr20 40365710 40365858 -26302147 + L1ME4a LINE L1 5770 5942 -179 234 287 90 41 chr20 40366472 40366594 -26301411 + MIR3 SINE MIR 60 187 -21 191 196 0 43 chr20 40367363 40367409 -26300596 + L2 LINE L2 3218 3261 -11 2644 36 3 10 chr20 40368148 40368457 -26299548 + AluY SINE Alu 1 307 -4 529 294 31 0 chr20 40368469 40368629 -26299376 + MIR SINE MIR 81 245 -17 392 238 6 0 chr20 40369074 40369242 -26298763 + (TG)n Simple_repeat Simple_repeat 2 170 0 310 278 33 11 chr20 40369412 40369502 -26298503 + L2 LINE L2 3181 3272 0 1112 196 108 30 chr20 40370781 40371077 -26296928 - MER2 DNA MER2_type -25 320 2 24 53 0 0 chr20 40371365 40371403 -26296602 + AT_rich Low_complexity Low_complexity 1 38 0 579 114 41 63 chr20 40371407 40371565 -26296440 - L1PA8A LINE L1 -93 6038 5889 1119 198 10 0 chr20 40371864 40372071 -26295934 - MER3 DNA MER1_type 0 209 1 760 287 64 94 chr20 40372121 40372203 -26295802 + LTR33 LTR ERVL 33 116 -405 2716 133 5 38 chr20 40372203 40372647 -26295358 - L1PA15 LINE L1 -1 6164 5736 760 287 64 94 chr20 40372647 40372941 -26295064 + LTR33 LTR ERVL 116 395 -126 2197 130 0 9 chr20 40372941 40373256 -26294749 - AluSq SINE Alu -1 312 1 760 287 64 94 chr20 40373256 40373359 -26294646 + LTR33 LTR ERVL 395 499 -22 842 252 68 19 chr20 40373524 40373730 -26294275 - MER58A DNA MER1_type 0 224 9 22 70 0 0 chr20 40373758 40373801 -26294204 + AT_rich Low_complexity Low_complexity 1 43 0 228 163 0 0 chr20 40373801 40373844 -26294161 + (TG)n Simple_repeat Simple_repeat 2 44 0 329 286 116 34 chr20 40374472 40374619 -26293386 + L1ME3A LINE L1 5725 5883 -238 304 290 53 0 chr20 40374825 40374956 -26293049 - MIR SINE MIR -74 188 51 211 205 0 0 chr20 40375543 40375582 -26292423 + A-rich Low_complexity Low_complexity 5 43 0 834 214 81 37 chr20 40376098 40376369 -26291636 + L1ME3A LINE L1 5877 6159 -11 637 20 40 10 chr20 40376369 40376469 -26291536 + (TAGA)n Simple_repeat Simple_repeat 2 104 0 254 242 158 21 chr20 40376589 40376684 -26291321 - L2 LINE L2 -614 2700 2593 2325 92 0 3 chr20 40376692 40376985 -26291020 + AluSc SINE Alu 1 292 -17 274 255 19 113 chr20 40378339 40378549 -26289456 + MLT1H LTR MaLR 95 312 -237 234 277 34 101 chr20 40378569 40378688 -26289317 + MLT1H LTR MaLR 439 549 0 525 194 62 23 chr20 40378848 40378977 -26289028 - MER94 DNA DNA 0 134 1 1924 144 21 0 chr20 40379646 40379931 -26288074 + AluSx SINE Alu 1 291 -21 1436 28 6 0 chr20 40379956 40380133 -26287872 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 2162 150 9 15 chr20 40380391 40380731 -26287274 + MER2 DNA MER2_type 1 338 -7 655 142 0 94 chr20 40380749 40380876 -26287129 - FLAM_C SINE Alu -26 117 3 305 333 147 13 chr20 40381196 40381592 -26286413 + L2 LINE L2 2422 2870 -444 199 350 68 0 chr20 40381838 40381955 -26286050 + L2 LINE L2 3141 3265 -7 453 237 30 15 chr20 40381985 40382116 -26285889 - L2 LINE L2 -1 3312 3180 377 305 47 0 chr20 40383640 40383768 -26284237 - MIR SINE MIR -73 189 56 1031 249 4 4 chr20 40383841 40384082 -26283923 + MIR SINE MIR 12 252 -10 191 351 30 18 chr20 40384225 40384393 -26283612 - MIR SINE MIR -70 192 23 224 82 0 61 chr20 40384814 40384863 -26283142 + (T)n Simple_repeat Simple_repeat 1 46 0 252 86 0 0 chr20 40385600 40385635 -26282370 + (TG)n Simple_repeat Simple_repeat 2 36 0 422 297 56 20 chr20 40386152 40386347 -26281658 - L1ME LINE L1 -335 5786 5585 735 232 17 0 chr20 40386652 40386829 -26281176 - LTR33 LTR ERVL -13 508 329 511 204 11 108 chr20 40387570 40387746 -26280259 - MIR SINE MIR -72 190 32 285 254 68 83 chr20 40387933 40388138 -26279867 + L2 LINE L2 2955 3156 -157 202 93 23 23 chr20 40388140 40388183 -26279822 + (TG)n Simple_repeat Simple_repeat 1 43 0 328 312 0 50 chr20 40388241 40388334 -26279671 + L2 LINE L2 3134 3219 -53 2160 162 87 12 chr20 40388334 40388736 -26279269 + MSTB1 LTR MaLR 1 432 0 328 312 0 50 chr20 40388736 40388783 -26279222 + L2 LINE L2 3219 3267 -5 454 328 77 0 chr20 40389891 40390086 -26277919 + MIR SINE MIR 4 213 -49 771 125 86 0 chr20 40390087 40390215 -26277790 + MER85 DNA T2_type 1 139 0 233 241 69 23 chr20 40391225 40391312 -26276693 + MER91C DNA MER1_type 25 115 -25 360 351 40 9 chr20 40391753 40391981 -26276024 - MIR SINE MIR -6 256 22 234 259 0 0 chr20 40392270 40392324 -26275681 + L2 LINE L2 3002 3055 -217 255 61 0 0 chr20 40392984 40393017 -26274988 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 2406 64 3 7 chr20 40394806 40395102 -26272903 + AluY SINE Alu 1 295 -16 639 283 122 23 chr20 40395529 40395833 -26272172 - L1MC4a LINE L1 -1895 5913 5580 1615 167 0 16 chr20 40395833 40396091 -26271914 - AluJb SINE Alu -58 254 1 482 286 183 14 chr20 40397188 40397478 -26270527 + L2 LINE L2 2967 3305 -8 1389 205 94 24 chr20 40399598 40399969 -26268036 - L1ME2 LINE L1 -214 5950 5554 1567 203 3 30 chr20 40400196 40400330 -26267675 + AluJb SINE Alu 1 137 -175 2599 50 0 0 chr20 40400330 40400629 -26267376 + AluY SINE Alu 1 299 -12 1567 203 3 30 chr20 40400629 40400789 -26267216 + AluJb SINE Alu 137 287 -25 243 297 70 39 chr20 40400821 40400949 -26267056 + MIR SINE MIR 117 248 -14 321 26 0 0 chr20 40401018 40401056 -26266949 + (TC)n Simple_repeat Simple_repeat 1 38 0 423 298 103 60 chr20 40402250 40402532 -26265473 + MLT1K LTR MaLR 261 554 -34 1930 204 14 40 chr20 40404447 40404946 -26263059 + Charlie4a DNA MER1_type 23 508 0 687 89 0 0 chr20 40405154 40405244 -26262761 + FLAM_C SINE Alu 35 124 -19 441 0 0 0 chr20 40405252 40405301 -26262704 + (CA)n Simple_repeat Simple_repeat 2 50 0 502 305 72 41 chr20 40405497 40406055 -26261950 - L1ME4a LINE L1 -73 6048 5474 21 36 0 0 chr20 40406055 40406083 -26261922 + AT_rich Low_complexity Low_complexity 1 28 0 747 239 15 20 chr20 40406235 40406432 -26261573 + MLT1H LTR MaLR 354 549 0 254 179 62 89 chr20 40406474 40406586 -26261419 - L1ME4a LINE L1 -76 6045 5937 344 342 68 55 chr20 40406592 40407209 -26260796 + L1ME4a LINE L1 3692 4316 -1830 441 301 36 0 chr20 40407348 40407544 -26260461 + L1ME4a LINE L1 5724 5926 -195 570 258 13 7 chr20 40408090 40408241 -26259764 + MIR SINE MIR 37 188 -74 257 217 72 0 chr20 40408496 40408565 -26259440 + MER53 DNA DNA 1 74 -115 262 289 11 22 chr20 40408611 40408701 -26259304 + L2 LINE L2 3225 3313 0 1009 270 186 48 chr20 40408713 40409273 -26258732 - MLT2F LTR ERVL -25 638 2 4325 258 83 40 chr20 40409275 40410151 -26257854 - ERVL-F LTR ERVL -9 5755 4783 2045 156 0 0 chr20 40410151 40410439 -26257566 + AluSx SINE Alu 1 288 -24 4325 258 83 40 chr20 40410439 40411101 -26256904 - ERVL-F LTR ERVL -981 4783 4151 205 244 200 26 chr20 40411958 40412073 -26255932 + MIR SINE MIR 57 191 -71 1849 89 0 12 chr20 40412372 40412618 -26255387 - AluY SINE Alu -7 304 62 215 265 36 12 chr20 40412686 40412769 -26255236 + MER5A DNA MER1_type 8 92 -97 286 271 43 0 chr20 40413973 40414043 -26253962 + polypurine Low_complexity Low_complexity 3 75 0 314 318 201 0 chr20 40415482 40415636 -26252369 - MER5A DNA MER1_type -1 188 4 502 268 46 12 chr20 40415959 40416135 -26251870 + MIR SINE MIR 56 231 -31 321 254 69 46 chr20 40416713 40416843 -26251162 - MER94 DNA DNA -1 133 1 34 24 0 0 chr20 40416926 40416967 -26251038 + AT_rich Low_complexity Low_complexity 1 41 0 660 266 52 31 chr20 40416967 40417231 -26250774 + MLT1G1 LTR MaLR 10 319 -276 439 304 88 0 chr20 40417283 40417431 -26250574 + MLT1G1 LTR MaLR 426 586 -9 192 40 0 0 chr20 40417545 40417570 -26250435 + (TA)n Simple_repeat Simple_repeat 2 26 0 243 203 0 0 chr20 40417570 40417634 -26250371 - L1MC4 LINE L1 -1339 6703 6640 328 311 16 82 chr20 40418142 40418448 -26249557 - L2 LINE L2 0 3272 2987 471 277 29 0 chr20 40418713 40418850 -26249155 + L2 LINE L2 2919 3059 -213 196 241 17 17 chr20 40419258 40419316 -26248689 + MIR SINE MIR 109 166 -96 279 212 30 20 chr20 40419921 40420020 -26247985 + (TTTA)n Simple_repeat Simple_repeat 4 103 0 254 228 33 33 chr20 40419982 40420074 -26247931 + (TTCA)n Simple_repeat Simple_repeat 1 92 0 * 298 200 0 38 chr20 40420097 40420202 -26247803 + (TTTA)n Simple_repeat Simple_repeat 2 102 0 574 136 18 27 chr20 40420287 40420397 -26247608 - MER33 DNA MER1_type 0 324 216 26 64 0 0 chr20 40420451 40420498 -26247507 + AT_rich Low_complexity Low_complexity 1 47 0 1057 193 29 0 chr20 40420511 40420718 -26247287 - MER33 DNA MER1_type -111 213 1 204 100 0 0 chr20 40421470 40421500 -26246505 - MIR SINE MIR -118 144 115 3526 77 0 4 chr20 40421717 40422184 -26245821 + L1PA8 LINE L1 5707 6171 -1 217 167 24 0 chr20 40422763 40422805 -26245200 + GA-rich Low_complexity Low_complexity 1 43 0 226 200 31 15 chr20 40423000 40423065 -26244940 + GA-rich Low_complexity Low_complexity 1 66 0 351 255 57 25 chr20 40423082 40423239 -26244766 + L2 LINE L2 2901 3062 -251 474 252 152 9 chr20 40425092 40425302 -26242703 - MIR SINE MIR -10 252 13 184 330 62 18 chr20 40425457 40425569 -26242436 - L2 LINE L2 -168 3104 2988 345 287 116 6 chr20 40425695 40425859 -26242146 + MIR SINE MIR 47 228 -34 387 224 36 62 chr20 40426017 40426178 -26241827 + MIR SINE MIR 17 170 -62 294 242 40 20 chr20 40427034 40427133 -26240872 - L1ME4a LINE L1 -86 6035 5935 213 276 81 11 chr20 40427236 40427323 -26240682 + MIR SINE MIR 36 128 -80 389 273 89 59 chr20 40427404 40427741 -26240264 - L1ME4a LINE L1 -213 5908 5562 206 322 0 0 chr20 40427963 40428022 -26239983 - MIR SINE MIR -63 145 87 227 315 0 14 chr20 40428085 40428158 -26239847 + L2 LINE L2 2681 2752 -562 292 290 18 112 chr20 40428181 40428321 -26239684 + L2 LINE L2 2877 2990 -282 699 168 8 24 chr20 40428321 40428446 -26239559 - FLAM_A SINE Alu -10 123 1 292 290 18 112 chr20 40428446 40428529 -26239476 + L2 LINE L2 2990 3079 -193 675 190 32 36 chr20 40428607 40428805 -26239200 + MER6 DNA MER2_type -65 862 -3 306 307 139 7 chr20 40429078 40429215 -26238790 + MIR SINE MIR 28 182 -80 334 282 127 0 chr20 40429731 40429841 -26238164 - L2 LINE L2 -1 3271 3148 1537 175 10 7 chr20 40430154 40430445 -26237560 - AluJb SINE Alu -10 302 11 211 231 0 0 chr20 40430516 40430555 -26237450 + polypurine Low_complexity Low_complexity 1 39 0 623 209 17 6 chr20 40430555 40430732 -26237273 + GA-rich Low_complexity Low_complexity 2 180 0 229 271 110 51 chr20 40430749 40430867 -26237138 - L2 LINE L2 0 3313 3189 324 250 146 7 chr20 40430947 40431091 -26236914 - MER103 DNA DNA -1 165 2 441 282 106 6 chr20 40431766 40431936 -26236069 + MIR SINE MIR 76 262 0 225 265 10 61 chr20 40432054 40432152 -26235853 + MLT1E LTR MaLR 22 114 -479 258 132 132 59 chr20 40432311 40432379 -26235626 + MLT1G LTR MaLR 514 586 -4 572 276 86 0 chr20 40433140 40433292 -26234713 - MIR SINE MIR -19 243 79 215 328 70 48 chr20 40433344 40433573 -26234432 + L2 LINE L2 2459 2692 -622 431 326 11 37 chr20 40434013 40434200 -26233805 + L2 LINE L2 2898 3079 -193 1708 121 0 4 chr20 40434701 40434958 -26233047 - AluSx SINE Alu -1 311 56 761 237 58 143 chr20 40434998 40435467 -26232538 + L2 LINE L2 2885 3313 0 7436 47 2 0 chr20 40435879 40437267 -26230738 - L1PA6 LINE L1 0 6154 4766 2597 165 0 56 chr20 40437447 40437969 -26230036 + L1MB3 LINE L1 5684 6176 -7 213 286 63 16 chr20 40438026 40438089 -26229916 + MIR SINE MIR 36 101 -107 279 217 0 60 chr20 40438102 40438185 -26229820 - LTR33A LTR ERVL -2 521 444 410 200 55 18 chr20 40438612 40438722 -26229283 + MIR SINE MIR 107 220 -42 363 305 115 39 chr20 40438743 40439022 -26228983 + L2 LINE L2 2921 3220 -93 273 207 0 17 chr20 40439529 40439587 -26228418 + MIR SINE MIR 99 155 -107 561 244 0 0 chr20 40440203 40440363 -26227642 + CT-rich Low_complexity Low_complexity 2 161 0 335 270 95 15 chr20 40440977 40441114 -26226891 + L3 LINE CR1 1371 1518 -59 397 292 139 23 chr20 40441345 40441561 -26226444 + MIR SINE MIR 18 258 -4 479 287 94 6 chr20 40442110 40442291 -26225714 + MIR SINE MIR 21 217 -45 764 249 82 87 chr20 40442383 40442761 -26225244 - MLT1I LTR MaLR 0 409 24 185 182 68 23 chr20 40443702 40443746 -26224259 + MIR SINE MIR 114 159 -103 273 132 0 0 chr20 40443816 40443854 -26224151 - L2 LINE L2 -12 3301 3264 * 548 236 112 41 chr20 40443820 40444040 -26223965 - MIR SINE MIR -10 252 15 200 344 83 61 chr20 40444416 40444872 -26223133 + L2 LINE L2 2512 2977 -337 201 345 42 35 chr20 40445503 40445645 -26222360 + L2 LINE L2 3163 3305 -8 329 284 174 55 chr20 40446707 40446908 -26221097 + MIR SINE MIR 38 262 0 180 246 82 16 chr20 40447100 40447161 -26220844 + L2 LINE L2 3234 3298 -15 469 269 165 16 chr20 40447572 40447754 -26220251 - MIR SINE MIR -20 242 34 1114 154 18 59 chr20 40447760 40447981 -26220024 - AluSg/x SINE Alu -14 298 87 4146 138 2 6 chr20 40448027 40448671 -26219334 - L1PA13 LINE L1 -11 6152 5512 457 184 58 19 chr20 40449108 40449211 -26218794 - MIR SINE MIR -77 185 79 402 375 19 9 chr20 40449814 40450030 -26217975 + Charlie8 DNA MER1_type 3 220 -2197 295 229 116 2 chr20 40450139 40450222 -26217783 - MIR SINE MIR -46 162 68 329 180 11 0 chr20 40450643 40450732 -26217273 + (CA)n Simple_repeat Simple_repeat 1 90 0 312 271 0 101 chr20 40450739 40450868 -26217137 - L1MC4 LINE L1 -1339 6703 6588 301 234 18 29 chr20 40450878 40451049 -26216956 + (CATA)n Simple_repeat Simple_repeat 2 170 0 198 167 0 0 chr20 40451089 40451125 -26216880 + GA-rich Low_complexity Low_complexity 2 37 0 605 311 16 26 chr20 40451169 40451362 -26216643 - MIR SINE MIR -20 242 52 363 320 92 36 chr20 40451398 40451648 -26216357 - L2 LINE L2 -31 3282 3019 269 233 11 0 chr20 40451827 40451917 -26216088 + (CATA)n Simple_repeat Simple_repeat 4 94 0 902 254 38 0 chr20 40452746 40452955 -26215050 - MLT1C LTR MaLR 0 467 251 354 332 49 91 chr20 40453065 40453672 -26214333 + L2 LINE L2 2683 3263 -9 215 255 149 32 chr20 40453797 40453891 -26214114 + MIR SINE MIR 33 137 -71 576 213 57 14 chr20 40453949 40454098 -26213907 - MIR SINE MIR -65 143 33 380 286 0 54 chr20 40454133 40454245 -26213760 - L2 LINE L2 -15 3298 3193 263 153 17 34 chr20 40455238 40455297 -26212708 - MIR SINE MIR -119 143 86 347 323 90 7 chr20 40456082 40456237 -26211768 - MIR SINE MIR -75 187 20 410 268 62 9 chr20 40456608 40456720 -26211285 - L2 LINE L2 -5 3267 3150 1314 199 158 3 chr20 40456948 40457264 -26210741 - MLT1A1 LTR MaLR 0 365 1 442 306 64 82 chr20 40458200 40458521 -26209484 - L2 LINE L2 -2 3270 2956 462 309 139 9 chr20 40458521 40458751 -26209254 + MIR SINE MIR 2 261 -1 208 330 11 0 chr20 40458975 40459063 -26208942 - L2 LINE L2 -723 2591 2503 1471 217 30 40 chr20 40459064 40459465 -26208540 + MLT2C1 LTR ERVL 1 397 0 2988 157 35 12 chr20 40459467 40460035 -26207970 + L1MA10 LINE L1 5754 6334 0 245 330 136 0 chr20 40460581 40460699 -26207306 - MIR SINE MIR -20 242 109 253 174 22 0 chr20 40460699 40460745 -26207260 - LTR16C LTR ERVL 0 491 445 839 231 17 34 chr20 40460746 40460980 -26207025 - L1MC4 LINE L1 -1 8041 7812 1750 148 0 23 chr20 40460981 40461284 -26206721 - AluJb SINE Alu -11 301 6 723 57 28 0 chr20 40461300 40461406 -26206599 - L1PA15 LINE L1 0 6165 6057 987 179 10 5 chr20 40461411 40461636 -26206369 - L1PA13 LINE L1 -64 6102 5878 1267 198 17 34 chr20 40461643 40461941 -26206064 - L1MC4 LINE L1 -244 7798 7506 353 293 51 19 chr20 40461969 40462126 -26205879 - LTR16C LTR ERVL -102 389 228 254 228 70 0 chr20 40462288 40462345 -26205660 - MIR SINE MIR -146 116 56 285 299 167 56 chr20 40462661 40462861 -26205144 + MIR SINE MIR 1 232 -30 2068 189 3 3 chr20 40462861 40463226 -26204779 + MLT1A1 LTR MaLR 1 365 0 285 299 167 56 chr20 40463226 40463259 -26204746 + MIR SINE MIR 232 260 -2 2144 123 3 0 chr20 40463273 40463575 -26204430 + AluSx SINE Alu 1 303 -9 428 290 59 102 chr20 40463950 40464225 -26203780 + L2 LINE L2 2718 2950 -322 1527 255 114 26 chr20 40464225 40464770 -26203235 + MLT1E LTR MaLR 1 593 0 428 290 59 102 chr20 40464770 40465070 -26202935 + L2 LINE L2 2950 3262 -10 * 611 246 192 0 chr20 40465048 40465251 -26202754 - MIR SINE MIR 0 262 21 477 231 68 59 chr20 40465697 40465918 -26202087 - L2 LINE L2 -17 3296 3074 242 263 247 26 chr20 40466859 40467049 -26200956 - MIR SINE MIR -11 251 20 1692 63 18 5 chr20 40467074 40467337 -26200668 + L1PA4 LINE L1 5907 6172 0 1017 253 118 19 chr20 40468118 40468618 -26199387 + MLT1G LTR MaLR 1 589 0 387 329 81 6 chr20 40468667 40468828 -26199177 - MIR SINE MIR -10 252 80 218 314 65 59 chr20 40469643 40469796 -26198209 + L2 LINE L2 2644 2797 -517 863 193 42 0 chr20 40469797 40469963 -26198042 - MER5A DNA MER1_type 0 189 17 325 331 62 66 chr20 40469980 40470481 -26197524 + L2 LINE L2 2807 3305 -8 427 219 189 24 chr20 40470484 40470648 -26197357 - MIR SINE MIR -62 200 10 360 0 0 0 chr20 40471690 40471730 -26196275 + (TG)n Simple_repeat Simple_repeat 2 41 0 378 336 157 12 chr20 40471884 40472208 -26195797 - L2 LINE L2 -2 3311 2941 728 274 89 15 chr20 40472641 40472880 -26195125 + MIR SINE MIR 8 261 -1 233 286 14 14 chr20 40472896 40472966 -26195039 - MLT1D LTR MaLR 0 593 524 660 251 6 12 chr20 40472966 40473133 -26194872 + L1P3 LINE L1 5 170 -5705 16074 182 23 22 chr20 40473163 40476405 -26191600 + L1P3 LINE L1 956 4202 -2259 5788 94 14 8 chr20 40476413 40477192 -26190813 + L1PA10 LINE L1 5363 6149 -19 180 0 0 0 chr20 40477192 40477212 -26190793 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 5788 94 14 8 chr20 40477212 40477223 -26190782 + L1PA10 LINE L1 6149 6158 -10 26 0 0 0 chr20 40477252 40477278 -26190727 + AT_rich Low_complexity Low_complexity 1 26 0 2012 164 64 32 chr20 40477288 40477727 -26190278 - MLT1D LTR MaLR -52 453 1 25 0 0 0 chr20 40478061 40478086 -26189919 + AT_rich Low_complexity Low_complexity 1 25 0 379 183 0 39 chr20 40478227 40478331 -26189674 + A-rich Low_complexity Low_complexity 4 103 0 * 880 119 11 38 chr20 40478307 40478492 -26189513 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 323 298 61 9 chr20 40478625 40478739 -26189266 - L2 LINE L2 0 3272 3153 2439 230 31 7 chr20 40478976 40479529 -26188476 - L1ME2 LINE L1 -114 6050 5485 1717 191 0 0 chr20 40479590 40479888 -26188117 - AluJo SINE Alu -14 298 1 1373 166 71 14 chr20 40480586 40480882 -26187123 + MER33 DNA MER1_type 1 313 -11 2072 98 31 14 chr20 40481313 40481600 -26186405 - AluSp SINE Alu -17 296 5 338 279 90 8 chr20 40482369 40482491 -26185514 - L2 LINE L2 -1 3312 3181 463 287 22 0 chr20 40482961 40483097 -26184908 + MIR SINE MIR 110 248 -14 196 289 0 36 chr20 40483597 40483680 -26184325 + L2 LINE L2 2884 2963 -309 191 271 0 0 chr20 40483716 40483764 -26184241 - L2 LINE L2 0 3313 3266 1175 162 51 0 chr20 40483801 40483998 -26184007 - MER58A DNA MER1_type 0 224 18 1573 160 21 3 chr20 40484057 40484344 -26183661 - MER33 DNA MER1_type -32 292 1 453 238 0 0 chr20 40484824 40484967 -26183038 + (CA)n Simple_repeat Simple_repeat 2 144 0 453 225 0 0 chr20 40486025 40486114 -26181891 - LTR16C LTR ERVL 0 491 403 702 164 0 0 chr20 40486124 40486234 -26181771 - MER46A DNA MER2_type -126 110 1 313 139 83 28 chr20 40486186 40486258 -26181747 + MER46A DNA MER2_type 97 172 -64 * 1174 221 30 55 chr20 40486875 40487313 -26180692 + MER63B DNA MER1_type 8 434 -2 442 305 0 0 chr20 40487390 40487508 -26180497 + L2 LINE L2 3191 3308 -5 358 299 194 19 chr20 40488298 40488509 -26179496 + MIR SINE MIR 2 249 -13 200 173 0 77 chr20 40488548 40488600 -26179405 - MIR SINE MIR -32 230 183 182 348 14 0 chr20 40488739 40488808 -26179197 + MIR3 SINE MIR 98 167 -41 286 288 45 83 chr20 40489156 40489380 -26178625 - L2 LINE L2 0 3313 3105 2862 108 15 43 chr20 40489380 40489484 -26178521 + L1PA16 LINE L1 5710 5815 -351 2511 78 0 3 chr20 40489484 40489791 -26178214 + AluY SINE Alu 1 306 -5 2862 108 15 43 chr20 40489791 40490147 -26177858 + L1PA16 LINE L1 5815 6157 -9 286 288 45 83 chr20 40490147 40490259 -26177746 - L2 LINE L2 -208 3105 2990 273 299 23 0 chr20 40490336 40490423 -26177582 - L2 LINE L2 -502 2812 2724 494 176 12 0 chr20 40490460 40490545 -26177460 - MER45A DNA AcHobo 0 178 93 252 268 0 37 chr20 40490634 40490716 -26177289 - L2 LINE L2 -1 3312 3234 251 252 42 76 chr20 40490978 40491097 -26176908 - MIR SINE MIR -73 135 21 418 365 15 10 chr20 40491183 40491383 -26176622 - MIR SINE MIR -3 259 59 543 309 6 0 chr20 40493013 40493178 -26174827 + MIR SINE MIR 73 238 -24 4611 181 47 44 chr20 40493189 40493342 -26174663 + L1MB2 LINE L1 4271 4422 -1749 1945 138 21 3 chr20 40493342 40493625 -26174380 + AluSx SINE Alu 7 294 -18 4611 181 47 44 chr20 40493625 40495427 -26172578 + L1MB2 LINE L1 4422 6169 -2 805 192 12 41 chr20 40495440 40495612 -26172393 + FRAM SINE Alu 4 170 -6 325 274 41 63 chr20 40495665 40495798 -26172207 - MIR SINE MIR -63 145 15 2089 114 3 3 chr20 40496317 40496607 -26171398 + AluSg SINE Alu 21 310 0 358 247 0 0 chr20 40496646 40496723 -26171282 - L2 LINE L2 -219 3053 2977 255 61 0 0 chr20 40496834 40496867 -26171138 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 229 295 29 38 chr20 40498216 40498321 -26169684 + MIR SINE MIR 41 144 -118 519 188 129 0 chr20 40498407 40498508 -26169497 + MER81 DNA DNA 1 114 0 1383 224 58 11 chr20 40498731 40499221 -26168784 - MLT1H LTR MaLR -1 548 13 183 296 273 12 chr20 40499302 40499555 -26168450 + L2 LINE L2 2422 2740 -574 1163 227 61 12 chr20 40499980 40500306 -26167699 - MER2 DNA MER2_type -1 343 2 781 295 99 16 chr20 40500446 40500897 -26167108 + L2 LINE L2 2568 3051 -262 224 284 157 30 chr20 40500929 40501063 -26166942 + L2 LINE L2 3163 3313 0 398 313 119 14 chr20 40501657 40502009 -26165996 + L2 LINE L2 2427 2815 -499 475 309 78 60 chr20 40502130 40502463 -26165542 + L2 LINE L2 2934 3272 0 360 0 0 0 chr20 40502924 40502964 -26165041 + (CA)n Simple_repeat Simple_repeat 2 41 0 214 305 30 89 chr20 40503055 40503291 -26164714 - L2 LINE L2 -35 3237 3016 214 266 47 0 chr20 40503299 40503363 -26164642 + MIR SINE MIR 105 171 -91 470 315 19 0 chr20 40503400 40503562 -26164443 - MIR SINE MIR -8 254 90 225 0 0 0 chr20 40504524 40504549 -26163456 + (CAGCT)n Simple_repeat Simple_repeat 1 25 0 580 254 32 73 chr20 40504803 40504999 -26163006 + MIR SINE MIR 25 210 -52 865 244 48 0 chr20 40504999 40505208 -26162797 - MER20 DNA MER1_type 0 219 1 580 254 32 73 chr20 40505208 40505259 -26162746 + MIR SINE MIR 210 262 0 257 263 0 12 chr20 40505685 40505765 -26162240 + MIR SINE MIR 173 251 -11 394 342 0 7 chr20 40505841 40505996 -26162009 - MIR3 SINE MIR -18 190 37 227 289 231 0 chr20 40506339 40506460 -26161545 - MIR SINE MIR -1 261 113 741 247 64 30 chr20 40507866 40508101 -26159904 + MIR SINE MIR 20 262 0 21 0 0 0 chr20 40508347 40508368 -26159637 + AT_rich Low_complexity Low_complexity 1 21 0 1933 179 69 43 chr20 40508407 40508899 -26159106 - MLT1D LTR MaLR 0 505 1 276 317 49 0 chr20 40508969 40509092 -26158913 - L3 LINE CR1 -1051 526 398 494 261 31 12 chr20 40509108 40509269 -26158736 - LTR67 LTR ERVL -8 549 386 317 363 88 43 chr20 40509791 40510119 -26157886 - L3 LINE CR1 -1199 378 36 184 311 27 40 chr20 40510529 40510603 -26157402 + MIR SINE MIR 20 92 -170 305 350 65 50 chr20 40512009 40512504 -26155501 - L2 LINE L2 -568 2746 2245 237 242 32 16 chr20 40513026 40513088 -26154917 - MIR SINE MIR -59 149 87 182 313 50 12 chr20 40513913 40513993 -26154012 + L2 LINE L2 3150 3232 -40 463 292 90 87 chr20 40514897 40515287 -26152718 - L2 LINE L2 0 3272 2882 466 288 73 29 chr20 40515967 40516172 -26151833 - MIR SINE MIR -14 248 35 246 303 50 0 chr20 40516730 40516829 -26151176 + MIR SINE MIR 70 173 -89 839 213 93 5 chr20 40516900 40517116 -26150889 - L1ME3A LINE L1 -1 6169 5935 2540 150 18 27 chr20 40517133 40517581 -26150424 + L1PA16 LINE L1 5721 6164 -2 331 218 11 35 chr20 40517638 40517725 -26150280 - MIR SINE MIR -55 207 123 3539 232 43 46 chr20 40517728 40518292 -26149713 + L1ME1 LINE L1 4234 4798 -1536 792 181 0 15 chr20 40518292 40518425 -26149580 + FLAM_A SINE Alu 1 131 -2 3539 232 43 46 chr20 40518425 40519833 -26148172 + L1ME1 LINE L1 4798 6334 0 572 251 29 29 chr20 40519860 40520067 -26147938 - MIR SINE MIR -15 247 41 2237 73 30 27 chr20 40521487 40521787 -26146218 + AluY SINE Alu 1 301 -10 1393 185 59 11 chr20 40521962 40522249 -26145756 - AluJo SINE Alu 0 302 2 308 337 77 0 chr20 40522635 40522804 -26145201 + LTR67 LTR ERVL 376 557 0 237 175 0 111 chr20 40522853 40522916 -26145089 + L2 LINE L2 3207 3262 -10 917 77 16 44 chr20 40522943 40523126 -26144879 + (GGGAA)n Simple_repeat Simple_repeat 3 180 0 312 352 111 10 chr20 40523140 40523535 -26144470 - L2 LINE L2 -821 2493 2059 270 310 90 0 chr20 40523716 40523861 -26144144 - MIR SINE MIR -11 251 94 282 184 184 23 chr20 40523958 40524045 -26143960 - MIR SINE MIR -134 128 28 225 306 16 0 chr20 40524047 40524109 -26143896 + (ATGGTG)n Simple_repeat Simple_repeat 6 68 0 224 281 35 0 chr20 40524835 40524892 -26143113 + L2 LINE L2 3245 3303 -10 * 883 204 21 34 chr20 40524873 40525108 -26142897 - MIR SINE MIR -3 259 28 201 39 0 0 chr20 40525144 40525170 -26142835 + (TG)n Simple_repeat Simple_repeat 2 27 0 267 326 11 11 chr20 40525214 40525309 -26142696 + MIR SINE MIR 40 134 -74 382 269 25 0 chr20 40525971 40526090 -26141915 - MIR SINE MIR -85 177 56 1684 203 92 43 chr20 40526533 40526977 -26141028 - MLT1D LTR MaLR -39 466 1 3609 180 32 18 chr20 40528393 40528926 -26139079 + L1MB8 LINE L1 3868 4405 -1741 5248 27 2 28 chr20 40528926 40529559 -26138446 + L1PA3 LINE L1 5537 6152 -3 3609 180 32 18 chr20 40529559 40529870 -26138135 + L1MB8 LINE L1 4405 4710 -1436 3003 82 0 5 chr20 40529872 40530264 -26137741 + L1PA8A LINE L1 5740 6129 -2 374 77 0 0 chr20 40530264 40530316 -26137689 + L1PA6 LINE L1 6101 6152 -2 4062 167 25 57 chr20 40530338 40531350 -26136655 + L1MB8 LINE L1 5191 6169 -9 266 237 52 31 chr20 40531472 40531569 -26136436 - L1ME4a LINE L1 -44 6077 5979 2096 113 0 7 chr20 40531807 40532091 -26135914 + AluSx SINE Alu 1 282 -30 25 0 0 0 chr20 40532519 40532544 -26135461 + AT_rich Low_complexity Low_complexity 1 25 0 271 266 0 0 chr20 40532572 40532636 -26135369 - Tigger6 DNA MER2_type -1533 64 1 251 164 36 0 chr20 40533264 40533319 -26134686 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 4682 226 79 47 chr20 40533391 40535979 -26132026 - L1ME2 LINE L1 -10 6154 3496 607 170 18 0 chr20 40537113 40537225 -26130780 + Ricksha_b DNA DNA 6 119 -1135 5327 144 28 46 chr20 40537237 40538264 -26129741 + Ricksha_b DNA DNA 239 1247 -7 1431 166 33 48 chr20 40538513 40538848 -26129157 + MER33 DNA MER1_type 1 323 -1 1375 136 51 21 chr20 40538892 40539128 -26128877 - MLT1B LTR MaLR 0 390 148 43855 30 23 3 chr20 40539128 40545162 -26122843 + L1PA3 LINE L1 2 6155 0 850 157 6 36 chr20 40545171 40545337 -26122668 - MLT1B LTR MaLR -229 161 1 218 356 10 10 chr20 40545349 40545453 -26122552 + MIR SINE MIR 47 150 -112 260 289 25 50 chr20 40545491 40545650 -26122355 - L1ME4a LINE L1 -247 5874 5720 665 202 118 59 chr20 40545707 40545945 -26122060 - MLT1C LTR MaLR -107 360 109 2017 130 74 42 chr20 40545945 40546298 -26121707 - THE1B LTR MaLR 0 364 1 367 289 150 28 chr20 40546299 40546586 -26121419 - L1ME4a LINE L1 -397 5724 5403 26 50 0 0 chr20 40546591 40546631 -26121374 + AT_rich Low_complexity Low_complexity 1 40 0 1520 225 53 46 chr20 40546797 40547228 -26120777 - MLT1C LTR MaLR 0 467 34 236 175 2 75 chr20 40547775 40547842 -26120163 - L2 LINE L2 -295 2977 2912 934 230 49 52 chr20 40548020 40548307 -26119698 + L1ME1 LINE L1 5878 6163 -3 1062 192 132 42 chr20 40548316 40548702 -26119303 - MER69 DNA AcHobo -87 2439 2019 1689 260 64 25 chr20 40548709 40549193 -26118812 - MER69 DNA AcHobo -1958 568 66 547 326 16 0 chr20 40549635 40549825 -26118180 + MIR SINE MIR 8 200 -62 468 201 66 138 chr20 40550126 40550203 -26117802 - MLT1K LTR MaLR 0 588 507 1983 138 3 0 chr20 40550203 40550492 -26117513 + AluSx SINE Alu 1 290 -22 468 201 66 138 chr20 40550492 40550718 -26117287 - MLT1K LTR MaLR -81 507 307 279 309 0 0 chr20 40551429 40551523 -26116482 + MIR SINE MIR 61 154 -108 2370 104 0 0 chr20 40551650 40551949 -26116056 + AluSx SINE Alu 1 299 -13 1026 271 162 22 chr20 40552328 40552786 -26115219 + LTR33A LTR ERVL 2 523 0 316 268 165 46 chr20 40552910 40553104 -26114901 + MIR SINE MIR 40 256 -6 202 98 49 24 chr20 40554399 40554440 -26113565 + T-rich Low_complexity Low_complexity 2 43 0 912 198 21 11 chr20 40554666 40554853 -26113152 + MER5A DNA MER1_type 1 189 0 275 250 15 0 chr20 40555339 40555407 -26112598 + MIR SINE MIR 109 177 -85 989 171 11 6 chr20 40555729 40555910 -26112095 - MER5A DNA MER1_type -7 182 1 417 306 81 29 chr20 40555917 40556090 -26111915 - MLT1J1 LTR MaLR -146 300 119 1036 315 52 26 chr20 40556554 40556979 -26111026 + MLT2F LTR ERVL 227 662 -1 578 285 48 16 chr20 40557000 40557186 -26110819 - MIR SINE MIR -70 192 1 2222 117 0 0 chr20 40557495 40557786 -26110219 + AluSx SINE Alu 1 291 -21 292 300 0 25 chr20 40558020 40558140 -26109865 + GA-rich Low_complexity Low_complexity 2 118 0 225 139 0 0 chr20 40558167 40558210 -26109795 + (GA)n Simple_repeat Simple_repeat 1 43 0 271 307 40 17 chr20 40559096 40559272 -26108733 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 293 270 190 29 chr20 40560191 40560365 -26107640 + MIR SINE MIR 34 235 -27 288 281 74 0 chr20 40560873 40560994 -26107011 - MIR SINE MIR -50 212 83 180 245 0 0 chr20 40561162 40561215 -26106790 + MIR SINE MIR 78 130 -78 845 164 14 111 chr20 40561372 40561580 -26106425 + MER53 DNA DNA 2 189 0 239 333 72 0 chr20 40561592 40561730 -26106275 - MIR SINE MIR -28 234 87 282 287 31 0 chr20 40561965 40562094 -26105911 + L2 LINE L2 2925 3057 -256 392 181 0 11 chr20 40562154 40562248 -26105757 + (TG)n Simple_repeat Simple_repeat 2 94 0 230 250 0 0 chr20 40562360 40562408 -26105597 - L2 LINE L2 0 3313 3266 1139 196 27 5 chr20 40562445 40562664 -26105341 - MER58A DNA MER1_type 0 224 1 240 272 78 10 chr20 40563535 40563638 -26104367 + (CATG)n Simple_repeat Simple_repeat 2 111 0 181 352 14 0 chr20 40564465 40564536 -26103469 - L2 LINE L2 -208 3064 2993 232 196 0 0 chr20 40564592 40564638 -26103367 + L2 LINE L2 3227 3272 0 695 263 58 5 chr20 40564987 40565177 -26102828 - MIR SINE MIR -51 211 12 718 248 52 22 chr20 40565387 40565617 -26102388 - MIR SINE MIR -10 252 16 281 118 20 0 chr20 40565677 40565728 -26102277 + GA-rich Low_complexity Low_complexity 1 52 0 210 191 0 0 chr20 40566784 40566831 -26101174 + (CA)n Simple_repeat Simple_repeat 1 47 0 183 256 0 0 chr20 40568989 40569028 -26098977 - MIR SINE MIR -6 256 218 312 313 10 10 chr20 40569063 40569159 -26098846 + MIR SINE MIR 10 105 -157 214 311 123 16 chr20 40569200 40569322 -26098683 - L2 LINE L2 0 3272 3138 379 356 59 4 chr20 40569346 40569582 -26098423 + MIR SINE MIR 2 250 -12 639 239 75 68 chr20 40570981 40571261 -26096744 + L1ME LINE L1 5458 5739 -382 2298 93 3 0 chr20 40571790 40572080 -26095925 + AluSq SINE Alu 1 291 -22 328 231 170 34 chr20 40572080 40572220 -26095785 - MIR SINE MIR -74 188 26 1245 287 93 0 chr20 40573353 40573792 -26094213 - LTR16C LTR ERVL -8 483 4 226 354 0 0 chr20 40573830 40573909 -26094096 + L2 LINE L2 3172 3250 -63 522 155 52 0 chr20 40574148 40574245 -26093760 + MIR SINE MIR 36 137 -125 309 311 91 8 chr20 40574481 40574613 -26093392 - L3 LINE CR1 -49 1528 1386 356 255 57 0 chr20 40574837 40574943 -26093062 - L3 LINE CR1 -515 1062 951 485 307 15 0 chr20 40574946 40575083 -26092922 + MIR SINE MIR 84 222 -40 240 328 48 32 chr20 40575162 40575351 -26092654 - L3 LINE CR1 -857 720 529 421 312 99 0 chr20 40575619 40575760 -26092245 - MIR SINE MIR -62 200 46 2064 127 3 3 chr20 40575810 40576117 -26091888 - AluSq SINE Alu 0 313 7 1907 220 89 36 chr20 40576238 40576798 -26091207 + MLT1G LTR MaLR 1 590 0 550 295 97 48 chr20 40576990 40577403 -26090602 - L2 LINE L2 -1 3271 2839 271 184 23 103 chr20 40577660 40577747 -26090258 + MER116 DNA Mariner 1 80 0 23 33 0 0 chr20 40577858 40577888 -26090117 + AT_rich Low_complexity Low_complexity 1 30 0 187 261 143 34 chr20 40578303 40578422 -26089583 - MIR3 SINE MIR -70 138 7 192 77 0 0 chr20 40578879 40578905 -26089100 + (TC)n Simple_repeat Simple_repeat 2 27 0 * 201 159 0 0 chr20 40578904 40578948 -26089057 + (TG)n Simple_repeat Simple_repeat 1 44 0 311 280 136 0 chr20 40579102 40579234 -26088771 - MIR SINE MIR -9 253 104 335 255 85 19 chr20 40579251 40579357 -26088648 + L2 LINE L2 3160 3272 0 363 311 42 0 chr20 40579593 40579712 -26088293 - L2 LINE L2 -3 3310 3187 2051 124 3 14 chr20 40580188 40580485 -26087520 + AluSq SINE Alu 2 289 -24 202 28 28 28 chr20 40580488 40580524 -26087481 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 531 261 8 8 chr20 40581307 40581437 -26086568 - MIR SINE MIR -113 149 20 872 178 153 25 chr20 40581485 40581726 -26086279 + ORSL DNA AcHobo 4 275 0 1968 132 3 24 chr20 40581911 40582207 -26085798 - AluSx SINE Alu -22 290 1 410 258 147 53 chr20 40582728 40582918 -26085087 - MIR SINE MIR -21 241 34 202 232 0 0 chr20 40583134 40583190 -26084815 + L2 LINE L2 2918 2973 -299 364 349 74 19 chr20 40583217 40583432 -26084573 + MIR SINE MIR 26 252 -10 280 254 0 45 chr20 40584005 40584115 -26083890 + C-rich Low_complexity Low_complexity 6 110 0 243 0 0 0 chr20 40584191 40584218 -26083787 + (GCCTG)n Simple_repeat Simple_repeat 1 27 0 769 193 0 83 chr20 40584849 40585041 -26082964 + MIR SINE MIR 39 214 -48 229 278 0 0 chr20 40585078 40585150 -26082855 + (TTA)n Simple_repeat Simple_repeat 2 73 0 1833 194 26 35 chr20 40585299 40585728 -26082277 - MLT1D LTR MaLR -73 432 8 270 211 26 26 chr20 40585952 40586028 -26081977 + MIR SINE MIR 65 140 -68 2930 10 0 0 chr20 40586844 40587153 -26080852 + AluYa5 SINE Alu 1 309 -2 368 175 33 48 chr20 40587172 40587420 -26080585 + (TG)n Simple_repeat Simple_repeat 1 244 0 325 257 40 5 chr20 40587437 40587800 -26080205 + (TG)n Simple_repeat Simple_repeat 1 375 0 247 259 0 0 chr20 40588425 40588479 -26079526 + L2 LINE L2 3242 3295 -18 717 259 6 6 chr20 40588930 40589104 -26078901 + MER45A DNA AcHobo 1 174 -4 265 297 139 0 chr20 40589964 40590065 -26077940 - MIR SINE MIR -61 147 33 445 305 60 43 chr20 40591697 40591930 -26076075 - MIR SINE MIR -19 243 7 204 40 0 0 chr20 40592415 40592440 -26075565 + (GAA)n Simple_repeat Simple_repeat 1 25 0 565 259 207 5 chr20 40592493 40592686 -26075319 - MIR SINE MIR -30 232 1 717 313 20 4 chr20 40592703 40592949 -26075056 - MIR SINE MIR 0 262 13 232 284 21 32 chr20 40593704 40593799 -26074206 - MIR SINE MIR -62 146 53 2032 151 0 7 chr20 40594201 40594493 -26073512 - AluSx SINE Alu -22 290 1 924 287 20 4 chr20 40594672 40594916 -26073089 + MIR SINE MIR 2 249 -13 236 313 78 9 chr20 40594947 40595062 -26072943 - L3 LINE CR1 -1191 386 264 201 254 0 32 chr20 40596963 40597026 -26070979 + C-rich Low_complexity Low_complexity 6 66 0 419 118 39 45 chr20 40597181 40597359 -26070646 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 230 153 34 17 chr20 40597360 40597419 -26070586 + (ATTG)n Simple_repeat Simple_repeat 3 62 0 1106 266 6 98 chr20 40597499 40598029 -26069976 - L2 LINE L2 -6 3307 2827 880 179 6 6 chr20 40598054 40598216 -26069789 - MER3 DNA MER1_type -47 162 1 293 293 53 0 chr20 40598235 40598310 -26069695 + L2 LINE L2 2976 3054 -218 839 199 34 0 chr20 40598402 40598548 -26069457 + AluJo SINE Alu 126 276 -36 207 100 0 0 chr20 40598552 40598582 -26069423 + (GGAGAA)n Simple_repeat Simple_repeat 4 33 0 297 278 143 40 chr20 40598617 40598743 -26069262 + L2 LINE L2 3134 3272 0 191 188 21 0 chr20 40599624 40599672 -26068333 + (TATG)n Simple_repeat Simple_repeat 4 52 0 303 85 0 0 chr20 40600065 40600112 -26067893 + (CA)n Simple_repeat Simple_repeat 1 47 0 264 350 107 7 chr20 40600422 40600562 -26067443 + MIR SINE MIR 20 173 -89 245 197 33 0 chr20 40607503 40607564 -26060441 + (CCCG)n Simple_repeat Simple_repeat 2 64 0 235 258 21 31 chr20 40607580 40607677 -26060328 + (CTGGGG)n Simple_repeat Simple_repeat 3 98 0 21 82 0 0 chr20 40608047 40608096 -26059909 + GC_rich Low_complexity Low_complexity 1 49 0 210 128 0 0 chr20 40608227 40608266 -26059739 + (TGG)n Simple_repeat Simple_repeat 3 41 0 215 185 0 37 chr20 40608969 40609023 -26058982 + (CTCG)n Simple_repeat Simple_repeat 4 55 0 24 32 0 0 chr20 40609094 40609125 -26058880 + GC_rich Low_complexity Low_complexity 1 31 0 2008 97 0 26 chr20 40613604 40613902 -26054103 - AluSx SINE Alu 0 332 42 265 193 53 0 chr20 40613915 40613972 -26054033 - MIR SINE MIR -71 191 132 507 240 172 16 chr20 40614007 40614199 -26053806 - MIR SINE MIR -31 231 10 421 284 143 46 chr20 40614892 40615262 -26052743 + L2 LINE L2 2562 2967 -347 344 305 107 15 chr20 40615556 40615687 -26052318 + MER5A DNA MER1_type 45 187 -2 * 435 198 111 32 chr20 40615571 40615697 -26052308 - MER5A DNA MER1_type -47 142 7 928 276 101 15 chr20 40616349 40616744 -26051261 - L1MC4a LINE L1 -1915 5893 5465 184 250 0 0 chr20 40617228 40617268 -26050737 + L2 LINE L2 3265 3304 -9 234 0 0 0 chr20 40618073 40618099 -26049906 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1117 219 0 4 chr20 40618403 40618641 -26049364 - LTR16B LTR ERVL 0 464 228 548 250 95 47 chr20 40618688 40618920 -26049085 - MIR SINE MIR -10 252 10 201 225 0 0 chr20 40621095 40621135 -26046870 + MIR SINE MIR 32 71 -137 404 222 0 0 chr20 40621448 40621529 -26046476 + MIR SINE MIR 44 124 -84 1044 208 14 5 chr20 40621843 40622050 -26045955 + MIR SINE MIR 6 214 -48 236 263 0 0 chr20 40622104 40622161 -26045844 - MIR SINE MIR -102 160 104 1071 230 69 65 chr20 40622401 40622923 -26045082 + L1MC5 LINE L1 7268 7791 -170 231 246 18 0 chr20 40623193 40623250 -26044755 + (TTCA)n Simple_repeat Simple_repeat 4 61 0 444 335 74 47 chr20 40623253 40623656 -26044349 - L2 LINE L2 -1 3312 2899 261 239 184 28 chr20 40624329 40624438 -26043567 - MIR SINE MIR -117 145 20 268 198 161 12 chr20 40624830 40624911 -26043094 + L2 LINE L2 3179 3271 -1 534 299 52 55 chr20 40624980 40625251 -26042754 + L1ME4a LINE L1 5852 6121 0 275 305 139 22 chr20 40626239 40626465 -26041540 + MIR SINE MIR 8 255 -7 312 298 0 53 chr20 40627188 40627319 -26040686 + GA-rich Low_complexity Low_complexity 2 125 0 189 0 0 0 chr20 40627497 40627518 -26040487 + (ATG)n Simple_repeat Simple_repeat 2 22 0 316 220 11 22 chr20 40627518 40627609 -26040396 - MIR SINE MIR -17 245 156 436 190 147 35 chr20 40627609 40627725 -26040280 + HsTC2 DNA Tc2 1 129 -1769 1365 212 83 18 chr20 40627738 40628124 -26039881 + HsTC2 DNA Tc2 1283 1869 -29 331 225 225 18 chr20 40628135 40628246 -26039759 - MIR SINE MIR -118 144 11 368 320 119 21 chr20 40628265 40628459 -26039546 + MIR SINE MIR 31 243 -19 273 221 237 23 chr20 40628718 40628849 -26039156 - MIR SINE MIR -1 261 103 632 264 127 25 chr20 40629031 40629476 -26038529 - L1ME4a LINE L1 -18 6103 5573 2096 154 0 0 chr20 40629507 40629806 -26038199 - AluSx SINE Alu -13 299 1 328 286 83 57 chr20 40629920 40629951 -26038054 - L1ME4a LINE L1 -756 5390 5361 577 251 56 40 chr20 40629951 40630202 -26037803 + MIR SINE MIR 5 259 -3 328 286 83 57 chr20 40630202 40630382 -26037623 - L1ME4a LINE L1 -785 5361 5179 282 267 103 68 chr20 40634030 40634176 -26033829 - MIR3 SINE MIR -25 183 33 308 257 243 20 chr20 40634497 40634649 -26033356 + MIR SINE MIR 34 219 -43 659 312 82 13 chr20 40635013 40635244 -26032761 - MIR SINE MIR -7 255 9 192 179 0 0 chr20 40635823 40635862 -26032143 + (TG)n Simple_repeat Simple_repeat 1 39 0 215 358 0 0 chr20 40636082 40636163 -26031842 - L2 LINE L2 -171 3101 3021 328 336 46 8 chr20 40636571 40636702 -26031303 + MIR SINE MIR 33 168 -94 298 272 49 0 chr20 40636717 40636798 -26031207 + MIR SINE MIR 73 157 -105 387 0 0 0 chr20 40637871 40637914 -26030091 + (TG)n Simple_repeat Simple_repeat 2 44 0 257 313 0 0 chr20 40639427 40639491 -26028514 - MIR SINE MIR -6 256 193 324 218 172 0 chr20 40639517 40639604 -26028401 + MIR SINE MIR 161 262 0 * 479 231 79 94 chr20 40639575 40639778 -26028227 - MIR SINE MIR -49 213 14 293 325 110 6 chr20 40640441 40640604 -26027401 + MER5A DNA MER1_type 7 186 -3 983 129 71 6 chr20 40641028 40641198 -26026807 - MER5A DNA MER1_type -1 188 8 196 289 0 0 chr20 40641228 40641280 -26026725 + L2 LINE L2 3262 3313 0 264 331 51 39 chr20 40641578 40641756 -26026249 + MIR SINE MIR 77 256 -6 3043 205 123 11 chr20 40642310 40643009 -26024996 - L1MC4 LINE L1 -183 7859 7061 180 77 0 0 chr20 40643009 40643035 -26024970 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 3043 205 123 11 chr20 40643035 40643121 -26024884 - L1MC4 LINE L1 -981 7061 6986 188 200 44 22 chr20 40643127 40643172 -26024833 - MIR SINE MIR -70 192 147 181 222 0 0 chr20 40643241 40643277 -26024728 + L2 LINE L2 361 396 -2918 661 228 56 41 chr20 40643529 40643726 -26024279 - L2 LINE L2 0 3313 3114 420 232 81 10 chr20 40643834 40643933 -26024072 - MIR SINE MIR -73 135 30 211 234 75 47 chr20 40644202 40644309 -26023696 - MIR SINE MIR -138 124 15 264 111 0 0 chr20 40644334 40644379 -26023626 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 22 35 0 0 chr20 40644744 40644773 -26023232 + AT_rich Low_complexity Low_complexity 1 29 0 252 318 106 12 chr20 40644796 40644881 -26023124 - MIR SINE MIR -154 108 16 235 217 0 0 chr20 40644930 40644976 -26023029 + L2 LINE L2 3262 3307 -6 587 243 56 19 chr20 40645298 40645482 -26022523 + MIR SINE MIR 2 190 -65 234 108 27 0 chr20 40645579 40645616 -26022389 - MLT1A2 LTR MaLR -2 455 418 553 233 8 16 chr20 40645670 40645799 -26022206 - MLT1A2 LTR MaLR -50 324 197 764 191 28 51 chr20 40645941 40646119 -26021886 - MER5B DNA MER1_type -3 175 2 786 128 0 0 chr20 40646324 40646449 -26021556 + L1MB1 LINE L1 6043 6167 -1 259 348 201 4 chr20 40647190 40647449 -26020556 - L2 LINE L2 -452 2862 2553 311 279 169 15 chr20 40647497 40647633 -26020372 - MIR SINE MIR -59 203 47 507 319 61 28 chr20 40647686 40647899 -26020106 + L3 LINE CR1 1042 1261 -316 256 299 92 0 chr20 40647979 40648066 -26019939 - L2 LINE L2 -532 2782 2688 623 305 84 17 chr20 40648088 40648432 -26019573 - L1M4 LINE L1 -1664 4482 4116 520 217 85 0 chr20 40648453 40648559 -26019446 + MER20 DNA MER1_type 7 121 -98 313 351 79 26 chr20 40648559 40648787 -26019218 - L1M4 LINE L1 -2068 4078 3839 601 315 83 87 chr20 40649233 40649705 -26018300 - L1M4 LINE L1 -2301 3845 3373 1991 107 3 30 chr20 40649705 40650005 -26018000 - AluSx SINE Alu -20 292 1 601 315 83 87 chr20 40650005 40650493 -26017512 - L1M4 LINE L1 -2773 3373 2686 285 258 43 11 chr20 40650512 40650605 -26017400 + Charlie7 DNA MER1_type 6 101 -2511 260 254 36 9 chr20 40650778 40650888 -26017117 + Charlie7 DNA MER1_type 2494 2606 -6 995 56 0 0 chr20 40651333 40651459 -26016546 - L1PA4 LINE L1 -5 6150 6025 1288 32 7 0 chr20 40651459 40651613 -26016392 + L1PA4 LINE L1 5875 6029 -126 1648 193 6 3 chr20 40651672 40651983 -26016022 - AluJb SINE Alu 0 312 1 1994 68 4 11 chr20 40651997 40652262 -26015743 + AluY SINE Alu 33 295 -16 195 162 0 0 chr20 40652346 40652383 -26015622 + (CTTG)n Simple_repeat Simple_repeat 2 38 0 192 143 0 0 chr20 40652463 40652505 -26015500 + (A)n Simple_repeat Simple_repeat 1 42 0 22 56 0 0 chr20 40652925 40652961 -26015044 + AT_rich Low_complexity Low_complexity 1 36 0 509 303 67 58 chr20 40653038 40653414 -26014591 - HAL1b LINE L1 -627 721 343 1185 234 34 125 chr20 40653424 40653976 -26014029 - L2 LINE L2 -8 3305 2804 761 175 119 26 chr20 40654139 40654333 -26013672 - L2 LINE L2 0 3313 3102 522 278 12 35 chr20 40654826 40654995 -26013010 - MIR SINE MIR 0 262 98 2539 102 24 16 chr20 40656264 40656636 -26011369 - THE1C LTR MaLR 0 375 1 1659 185 7 7 chr20 40656705 40657002 -26011003 + AluJb SINE Alu 1 297 -15 674 220 138 32 chr20 40657009 40657227 -26010778 + MIR SINE MIR 17 257 -5 487 244 82 0 chr20 40657451 40657586 -26010419 - MIR SINE MIR -6 256 111 1201 151 49 0 chr20 40657805 40658010 -26009995 + MER20 DNA MER1_type 1 215 -4 1972 82 55 7 chr20 40658087 40658378 -26009627 + AluSc SINE Alu 3 307 -2 21 0 0 0 chr20 40659156 40659177 -26008828 + AT_rich Low_complexity Low_complexity 1 21 0 321 301 89 0 chr20 40659872 40659995 -26008010 + MIR SINE MIR 78 211 -51 241 224 17 17 chr20 40660212 40660270 -26007735 - MIR SINE MIR -98 164 107 512 308 8 0 chr20 40660763 40660896 -26007109 - MIR3 SINE MIR -38 170 37 410 294 38 87 chr20 40661354 40661619 -26006386 + L2 LINE L2 3015 3266 -6 975 158 169 18 chr20 40662445 40662723 -26005282 - MER33 DNA MER1_type 0 324 5 405 230 89 37 chr20 40665655 40665817 -26002188 + MIR SINE MIR 88 258 -4 197 318 16 0 chr20 40665974 40666037 -26001968 + L3b LINE CR1 1195 1258 -325 210 308 19 0 chr20 40666201 40666253 -26001752 + MIR SINE MIR 48 100 -162 24 53 0 0 chr20 40667062 40667100 -26000905 + AT_rich Low_complexity Low_complexity 1 38 0 695 240 61 31 chr20 40669019 40669215 -25998790 - MER63A DNA MER1_type -8 202 1 263 293 156 18 chr20 40669583 40669750 -25998255 + MIR3 SINE MIR 11 200 -8 695 277 23 18 chr20 40669994 40670214 -25997791 + MIR SINE MIR 28 248 -14 267 253 189 21 chr20 40671074 40671169 -25996836 + L3 LINE CR1 448 558 -1019 509 143 0 33 chr20 40671210 40671301 -25996704 - FRAM SINE Alu -18 158 71 230 303 118 34 chr20 40671900 40672016 -25995989 + L2 LINE L2 3002 3132 -140 542 272 19 32 chr20 40672016 40672174 -25995831 + MER5A DNA MER1_type 1 156 -33 532 325 76 5 chr20 40672175 40672432 -25995573 - L2 LINE L2 -280 3033 2747 1348 187 47 63 chr20 40672468 40672645 -25995360 - AluJo SINE Alu -8 294 123 207 0 0 0 chr20 40672645 40672668 -25995337 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1348 187 47 63 chr20 40672668 40672789 -25995216 - AluJo SINE Alu -179 123 1 304 252 24 57 chr20 40673070 40673193 -25994812 + MLT1H LTR MaLR 408 526 -23 968 230 22 173 chr20 40673224 40673820 -25994185 - L2 LINE L2 -571 2743 2238 379 290 311 20 chr20 40673852 40674100 -25993905 + L2 LINE L2 2932 3251 -21 276 309 159 12 chr20 40674119 40674317 -25993688 - MIR SINE MIR -38 224 3 287 250 40 13 chr20 40674915 40674991 -25993014 + MIR SINE MIR 88 165 -97 425 287 143 23 chr20 40675523 40675739 -25992266 + MLT1J2 LTR MaLR 203 444 -6 304 291 106 92 chr20 40676077 40676369 -25991636 + MLT1K LTR MaLR 149 444 -144 351 267 29 0 chr20 40677165 40677270 -25990735 + L2 LINE L2 2829 2936 -378 2214 214 60 27 chr20 40677270 40677785 -25990220 - MLT1F LTR MaLR 0 542 11 454 285 85 30 chr20 40677795 40677995 -25990010 + L2 LINE L2 2931 3141 -172 473 155 59 0 chr20 40678016 40678108 -25989897 - L1MD3 LINE L1 -12 7976 7678 737 214 13 13 chr20 40678130 40678289 -25989716 + L2 LINE L2 3154 3312 -1 201 313 0 16 chr20 40679014 40679078 -25988927 - MIR SINE MIR -10 252 190 217 205 0 0 chr20 40679263 40679302 -25988703 - MIR SINE MIR -65 143 105 387 218 113 32 chr20 40679403 40679527 -25988478 + MER5B DNA MER1_type 25 158 -20 476 339 60 0 chr20 40680121 40680304 -25987701 - MIR SINE MIR -21 241 48 3125 158 45 2 chr20 40680520 40681077 -25986928 - L1MC1 LINE L1 -50 6283 5703 260 283 75 9 chr20 40681535 40681641 -25986364 - L2 LINE L2 -1303 2011 1899 376 323 106 0 chr20 40681769 40681930 -25986075 - MIR SINE MIR -54 208 31 507 330 10 21 chr20 40682282 40682476 -25985529 - MIR SINE MIR -25 237 46 499 307 55 0 chr20 40683550 40683713 -25984292 + MIR SINE MIR 20 191 -71 201 147 0 0 chr20 40684167 40684201 -25983804 + (A)n Simple_repeat Simple_repeat 1 34 0 508 203 68 68 chr20 40684364 40684527 -25983478 - MIR SINE MIR -34 228 66 974 154 15 77 chr20 40684870 40685000 -25983005 + MER5A DNA MER1_type 7 124 -65 2051 98 0 14 chr20 40685000 40685337 -25982668 - AluSx SINE Alu 0 333 1 974 154 15 77 chr20 40685337 40685400 -25982605 + MER5A DNA MER1_type 124 189 0 439 317 0 8 chr20 40686127 40686247 -25981758 + MIR SINE MIR 21 139 -123 888 260 19 10 chr20 40686733 40686941 -25981064 + MIR SINE MIR 47 256 -6 511 326 17 13 chr20 40687985 40688215 -25979790 + MLT1H LTR MaLR 75 305 -244 730 101 0 0 chr20 40688353 40688452 -25979553 - L1PA10 LINE L1 -10 6158 6060 1981 132 0 0 chr20 40688477 40688784 -25979221 + AluSx SINE Alu 1 307 0 448 272 68 20 chr20 40688820 40688967 -25979038 + MER5A DNA MER1_type 36 189 0 475 243 36 0 chr20 40689160 40689300 -25978705 + L1MA10 LINE L1 6183 6327 -7 446 260 47 0 chr20 40689642 40689769 -25978236 - MIR SINE MIR -117 145 13 490 277 88 22 chr20 40689937 40690074 -25977931 - MIR SINE MIR -70 192 47 250 299 247 0 chr20 40690098 40690195 -25977810 - MER5A DNA MER1_type -12 177 57 213 39 0 0 chr20 40690201 40690227 -25977778 + (TTG)n Simple_repeat Simple_repeat 3 28 0 805 84 0 0 chr20 40691879 40691986 -25976019 + AluSc SINE Alu 187 293 -16 197 139 23 0 chr20 40692476 40692519 -25975486 + (CACCAT)n Simple_repeat Simple_repeat 6 49 0 1043 196 36 32 chr20 40692536 40692756 -25975249 - MIR SINE MIR -28 234 14 319 146 134 49 chr20 40693966 40694048 -25973957 + L2 LINE L2 3225 3313 0 1850 141 67 28 chr20 40694054 40694415 -25973590 - THE1C LTR MaLR 0 375 1 222 209 0 0 chr20 40694947 40694990 -25973015 + MIR SINE MIR 117 159 -103 717 214 0 38 chr20 40695508 40695667 -25972338 + MIR SINE MIR 110 262 0 574 199 48 65 chr20 40695603 40695789 -25972216 - MIR SINE MIR -50 212 30 * 469 234 196 0 chr20 40696122 40696280 -25971725 + MIR SINE MIR 68 256 -6 205 255 0 0 chr20 40697516 40697567 -25970438 + GA-rich Low_complexity Low_complexity 6 56 0 1349 257 48 6 chr20 40697603 40697938 -25970067 - LTR16C LTR ERVL -9 482 134 288 263 13 13 chr20 40698042 40698118 -25969887 - MIR SINE MIR -110 152 77 195 256 0 0 chr20 40698322 40698361 -25969644 + L2 LINE L2 3222 3260 -12 196 275 204 14 chr20 40698490 40698632 -25969373 - L2 LINE L2 -300 2972 2804 263 250 56 9 chr20 40698824 40698932 -25969073 + L1MC4a LINE L1 5870 5982 -1826 262 250 42 0 chr20 40699320 40699416 -25968589 - L1ME4a LINE L1 -3 6118 6019 571 286 129 15 chr20 40699467 40699736 -25968269 - L1ME4a LINE L1 -197 5924 5610 2334 88 3 0 chr20 40699736 40700041 -25967964 - AluSp SINE Alu -6 307 2 571 286 129 15 chr20 40700041 40700096 -25967909 - L1ME4a LINE L1 -511 5610 5563 1090 177 56 0 chr20 40700129 40700327 -25967678 - MER3 DNA MER1_type 0 209 1 1619 253 36 47 chr20 40700330 40701081 -25966924 - L2 LINE L2 -113 3200 2460 216 296 0 0 chr20 40702314 40702368 -25965637 + GA-rich Low_complexity Low_complexity 1 54 0 306 0 0 0 chr20 40702458 40702492 -25965513 + (TG)n Simple_repeat Simple_repeat 2 35 0 261 196 0 0 chr20 40702493 40702549 -25965456 + GA-rich Low_complexity Low_complexity 2 57 0 1613 244 43 17 chr20 40702612 40703034 -25964971 - LTR16A LTR ERVL 0 450 18 848 288 118 22 chr20 40703511 40704011 -25963994 + L2 LINE L2 2233 2780 -534 729 201 29 117 chr20 40704123 40704431 -25963574 + MER33 DNA MER1_type 1 274 -50 4081 92 12 5 chr20 40704482 40705072 -25962933 - L1MA2 LINE L1 0 6304 5711 1869 145 0 0 chr20 40705637 40705941 -25962064 + AluSx SINE Alu 1 304 0 633 316 94 19 chr20 40706425 40706732 -25961273 + L2 LINE L2 2943 3272 0 416 234 153 7 chr20 40707464 40707601 -25960404 - MIR SINE MIR -34 228 72 255 204 0 56 chr20 40707595 40707649 -25960356 + MIR SINE MIR 96 146 -62 * 250 220 20 0 chr20 40707654 40707704 -25960301 + L2 LINE L2 3210 3260 -12 478 285 15 0 chr20 40708144 40708281 -25959724 + MER117 DNA MER1_type 31 169 -28 361 345 148 18 chr20 40708536 40708820 -25959185 + L2 LINE L2 2952 3272 0 522 322 90 12 chr20 40708934 40709402 -25958603 - L2 LINE L2 -60 3253 2734 230 290 32 0 chr20 40709413 40709475 -25958530 - L2 LINE L2 0 3272 3209 790 203 20 6 chr20 40709659 40709840 -25958165 - MER63A DNA MER1_type 0 210 26 485 269 220 16 chr20 40709995 40710181 -25957824 + MIR SINE MIR 39 262 0 214 286 0 14 chr20 40710373 40710443 -25957562 + MIR SINE MIR 181 249 -13 4384 239 56 47 chr20 40710544 40712983 -25955022 - L1ME1 LINE L1 -7 6439 4022 1780 203 8 14 chr20 40712983 40713348 -25954657 + MLT1A1 LTR MaLR 3 365 0 4384 239 56 47 chr20 40713348 40713547 -25954458 - L1ME1 LINE L1 -2424 4022 3826 231 36 0 0 chr20 40713547 40713575 -25954430 + (TTTG)n Simple_repeat Simple_repeat 4 31 0 1477 181 38 0 chr20 40713575 40713841 -25954164 - AluJo SINE Alu -32 280 5 4384 239 56 47 chr20 40713841 40714640 -25953365 - L1ME1 LINE L1 -2619 3827 1486 270 241 0 0 chr20 40714654 40714708 -25953297 + L1MEc LINE L1 499 552 -5844 1365 246 66 54 chr20 40714713 40714903 -25953102 - L1ME1 LINE L1 -5825 782 596 261 0 0 0 chr20 40714903 40714932 -25953073 + (CA)n Simple_repeat Simple_repeat 1 29 0 1365 246 66 54 chr20 40714932 40715240 -25952765 - L1ME1 LINE L1 -6011 596 278 532 321 22 5 chr20 40715792 40715976 -25952029 - MER117 DNA MER1_type 0 197 11 23 33 0 0 chr20 40716133 40716163 -25951842 + AT_rich Low_complexity Low_complexity 1 30 0 547 236 27 0 chr20 40716358 40716468 -25951537 + MER81 DNA DNA 2 114 0 221 287 39 146 chr20 40716877 40717047 -25950958 - L2 LINE L2 -12 3260 3142 749 259 43 28 chr20 40717047 40717302 -25950703 - MIR SINE MIR -1 261 3 221 287 39 146 chr20 40717302 40717466 -25950539 - L2 LINE L2 -130 3142 2962 359 286 224 39 chr20 40717541 40718058 -25949947 - L2 LINE L2 -455 2859 2247 490 282 48 48 chr20 40718362 40718571 -25949434 - MIR SINE MIR -6 256 48 2193 105 0 0 chr20 40718830 40719134 -25948871 + AluSc SINE Alu 1 304 -5 2055 117 0 10 chr20 40719469 40719767 -25948238 - AluSc SINE Alu -14 295 1 196 157 98 59 chr20 40720114 40720165 -25947840 - L2 LINE L2 -7 3265 3213 29 84 0 0 chr20 40720193 40720264 -25947741 + AT_rich Low_complexity Low_complexity 1 71 0 272 190 155 0 chr20 40720275 40720333 -25947672 + MIR SINE MIR 86 152 -110 189 327 149 9 chr20 40720565 40720672 -25947333 - MIR SINE MIR -129 133 12 581 279 45 6 chr20 40720808 40720987 -25947018 + MIR SINE MIR 33 218 -44 348 214 60 12 chr20 40720984 40721068 -25946937 - L2 LINE L2 -17 3255 3168 * 1763 166 29 37 chr20 40721192 40721542 -25946463 - MLT1B LTR MaLR -42 348 2 260 365 10 19 chr20 40721902 40722006 -25945999 - MIR SINE MIR -147 115 13 411 281 61 65 chr20 40722312 40722543 -25945462 + L2 LINE L2 2618 2847 -467 709 283 170 0 chr20 40722705 40722981 -25945024 - MLT1J2 LTR MaLR -125 325 3 2133 148 11 48 chr20 40723255 40723634 -25944371 - MLT1A1 LTR MaLR 0 365 1 198 381 39 32 chr20 40724819 40724974 -25943031 - L2 LINE L2 -1 3271 3116 238 135 0 0 chr20 40724984 40725021 -25942984 - L2 LINE L2 -16 3297 3261 1128 262 86 38 chr20 40725257 40725654 -25942351 + LTR16C LTR ERVL 73 488 -3 1944 127 7 13 chr20 40725843 40726151 -25941854 + AluSx SINE Alu 1 306 -6 587 271 45 8 chr20 40728107 40728240 -25939765 + MER91C DNA MER1_type 1 138 -2 205 343 11 0 chr20 40729359 40729444 -25938561 - MIR SINE MIR -67 141 83 622 196 46 88 chr20 40729556 40729750 -25938255 + LTR33A LTR ERVL 335 520 -3 188 241 12 72 chr20 40729798 40729881 -25938124 + L2 LINE L2 3119 3196 -117 506 235 0 0 chr20 40729920 40730018 -25937987 + FLAM_A SINE Alu 24 121 -21 398 298 10 10 chr20 40730021 40730125 -25937880 + L2 LINE L2 3210 3313 0 1771 202 19 25 chr20 40730494 40730861 -25937144 + MLT1A1 LTR MaLR 1 365 0 198 258 0 0 chr20 40730864 40730926 -25937079 + (CA)n Simple_repeat Simple_repeat 2 63 0 362 322 6 47 chr20 40730928 40731099 -25936906 + (CATG)n Simple_repeat Simple_repeat 4 167 0 426 256 28 28 chr20 40731328 40731508 -25936497 + (TG)n Simple_repeat Simple_repeat 1 180 0 312 319 91 24 chr20 40732661 40732871 -25935134 - L2 LINE L2 -135 3137 2914 255 283 152 0 chr20 40733253 40733352 -25934653 - MIR SINE MIR -62 146 33 411 236 11 6 chr20 40733656 40733834 -25934171 + CT-rich Low_complexity Low_complexity 2 180 0 601 246 37 32 chr20 40734334 40734521 -25933484 + MIR SINE MIR 44 231 -31 651 166 92 18 chr20 40734856 40735019 -25932986 + MER53 DNA DNA 15 189 0 285 329 13 0 chr20 40735968 40736047 -25931958 - MIR SINE MIR -12 250 171 523 259 27 40 chr20 40736286 40736510 -25931495 + LTR33 LTR ERVL 298 518 -3 388 229 39 16 chr20 40736512 40736651 -25931354 - MIR SINE MIR -61 147 35 1335 175 19 0 chr20 40736964 40737175 -25930830 + MER20 DNA MER1_type 1 215 -4 218 250 135 55 chr20 40737180 40737329 -25930676 - MIR3 SINE MIR -11 197 27 294 245 133 0 chr20 40738202 40738300 -25929705 - LTR33 LTR ERVL -55 466 356 259 204 0 0 chr20 40738300 40738344 -25929661 - THE1B LTR MaLR 0 428 385 * 1695 121 4 4 chr20 40738342 40738598 -25929407 - THE1B LTR MaLR -108 256 1 635 209 137 0 chr20 40738697 40738850 -25929155 - LTR33 LTR ERVL -301 220 47 292 294 48 16 chr20 40739741 40739867 -25928138 + MER117 DNA MER1_type 68 197 0 262 342 124 26 chr20 40740389 40740696 -25927309 + L2 LINE L2 2823 3159 -113 238 320 50 20 chr20 40741942 40742042 -25925963 + MIR SINE MIR 87 189 -73 194 339 0 0 chr20 40742176 40742241 -25925764 - MIR SINE MIR -162 100 36 268 359 96 15 chr20 40742757 40742955 -25925050 + L2 LINE L2 2849 3062 -210 281 295 53 11 chr20 40743025 40743120 -25924885 + L2 LINE L2 3169 3267 -5 291 244 12 12 chr20 40743301 40743387 -25924618 + L1M4 LINE L1 2968 3053 -3093 523 170 45 9 chr20 40743434 40743546 -25924459 - HAL1 LINE L1 -2344 163 48 1310 269 19 8 chr20 40743575 40743999 -25924006 + LTR16B LTR ERVL 9 464 0 388 264 45 0 chr20 40744002 40744112 -25923893 + HAL1 LINE L1 201 315 -2192 212 159 23 23 chr20 40744150 40744194 -25923811 + MIR SINE MIR 209 252 -10 4787 268 72 41 chr20 40744201 40744780 -25923225 + HAL1 LINE L1 329 888 -1619 1282 170 40 12 chr20 40744780 40745033 -25922972 + L1MB8 LINE L1 5914 6173 -5 4787 268 72 41 chr20 40745033 40745602 -25922403 + HAL1 LINE L1 888 1437 -1070 2069 211 119 28 chr20 40745602 40746096 -25921909 - MLT1F LTR MaLR -1 541 3 4787 268 72 41 chr20 40746096 40747056 -25920949 + HAL1 LINE L1 1437 2505 -2 240 340 68 64 chr20 40747211 40747446 -25920559 + MIR SINE MIR 27 262 0 207 100 0 0 chr20 40747470 40747500 -25920505 + (ATG)n Simple_repeat Simple_repeat 1 30 0 636 295 57 0 chr20 40747527 40747737 -25920268 - MIR SINE MIR -39 223 2 1447 191 44 85 chr20 40747921 40748309 -25919696 + MLT1A2 LTR MaLR 3 374 0 248 348 57 28 chr20 40748359 40748500 -25919505 + MIR SINE MIR 2 146 -116 593 261 19 25 chr20 40748590 40748751 -25919254 - MIR SINE MIR -46 216 57 996 234 64 24 chr20 40748806 40749101 -25918904 + MLT1G LTR MaLR 284 590 0 441 277 0 27 chr20 40749803 40749915 -25918090 - L2 LINE L2 -8 3305 3197 553 333 72 48 chr20 40750117 40750619 -25917386 - L2 LINE L2 -343 2971 2458 1010 275 132 40 chr20 40751461 40752002 -25916003 - L2 LINE L2 -2 3311 2716 813 268 29 0 chr20 40752234 40752439 -25915566 - MIR SINE MIR -51 211 1 224 308 0 31 chr20 40752624 40752689 -25915316 + L2 LINE L2 3209 3271 -1 29 78 0 0 chr20 40752815 40752879 -25915126 + AT_rich Low_complexity Low_complexity 1 64 0 234 323 0 31 chr20 40753432 40753528 -25914477 + C-rich Low_complexity Low_complexity 2 94 0 698 183 400 34 chr20 40754348 40754688 -25913317 + MLT1G LTR MaLR 92 590 0 372 342 43 6 chr20 40754827 40754988 -25913017 + MIR SINE MIR 19 185 -77 448 252 223 16 chr20 40755026 40755233 -25912772 + MIR SINE MIR 1 248 -14 415 253 20 67 chr20 40756155 40756305 -25911700 - MIR SINE MIR -40 222 80 413 308 36 54 chr20 40757273 40757497 -25910508 + L2 LINE L2 2830 3049 -223 338 129 16 16 chr20 40757594 40757656 -25910349 + MLT1H LTR MaLR 52 113 -436 301 256 128 38 chr20 40757953 40758086 -25909919 - L2 LINE L2 -10 3303 3159 258 222 37 0 chr20 40758263 40758317 -25909688 - L2 LINE L2 -5 3308 3253 299 326 143 15 chr20 40758378 40758574 -25909431 - MIR SINE MIR -6 256 36 1990 136 13 31 chr20 40758882 40759199 -25908806 - AluJb SINE Alu -1 311 1 541 326 157 34 chr20 40759938 40760352 -25907653 - L2 LINE L2 0 3272 2808 241 241 35 103 chr20 40760393 40760538 -25907467 - L2 LINE L2 -642 2672 2538 865 264 108 10 chr20 40760721 40761035 -25906970 - LTR16C LTR ERVL 0 491 147 385 345 29 19 chr20 40761391 40761597 -25906408 - MIR SINE MIR -3 259 52 1273 204 37 22 chr20 40761662 40761986 -25906019 + L1MC4 LINE L1 7699 8027 -15 244 223 348 27 chr20 40762510 40762622 -25905383 + MIR SINE MIR 22 139 -69 770 264 56 40 chr20 40762635 40762938 -25905067 - L2 LINE L2 0 3313 3006 832 263 140 0 chr20 40763319 40763604 -25904401 + LTR16C LTR ERVL 164 488 -3 377 219 12 12 chr20 40763683 40763765 -25904240 + L2 LINE L2 3226 3307 -6 598 327 44 43 chr20 40764903 40764929 -25903076 - L2 LINE L2 -2 3270 3246 1565 161 10 65 chr20 40764929 40765239 -25902766 + AluJo SINE Alu 3 295 -17 598 327 44 43 chr20 40765239 40765385 -25902620 - L2 LINE L2 -26 3246 3102 2355 224 28 9 chr20 40765385 40765913 -25902092 - MLT1F LTR MaLR 0 542 5 598 327 44 43 chr20 40765913 40766097 -25901908 - L2 LINE L2 -170 3102 2917 205 255 20 0 chr20 40766349 40766400 -25901605 + (TTAGGG)n Simple_repeat Simple_repeat 1 52 0 546 195 11 136 chr20 40766419 40766602 -25901403 + MIR SINE MIR 37 201 -61 331 267 30 20 chr20 40767000 40767101 -25900904 + L2 LINE L2 3169 3270 -43 640 239 71 47 chr20 40767101 40767259 -25900746 + MIR SINE MIR 1 169 -93 2089 115 31 0 chr20 40767259 40767545 -25900460 + AluSq SINE Alu 1 295 -18 640 239 71 47 chr20 40767545 40767641 -25900364 + MIR SINE MIR 169 261 -1 1070 184 304 0 chr20 40769095 40769460 -25898545 + MLT1D LTR MaLR 28 503 -2 883 273 0 0 chr20 40769472 40769670 -25898335 + MIR SINE MIR 52 249 -13 437 311 0 8 chr20 40769779 40769911 -25898094 - L2 LINE L2 -1 3312 3182 29 60 0 0 chr20 40769922 40769972 -25898033 + AT_rich Low_complexity Low_complexity 1 50 0 190 224 207 0 chr20 40770044 40770102 -25897903 - L2 LINE L2 -213 3059 2990 254 239 53 62 chr20 40770418 40770531 -25897474 - MLT1I LTR MaLR -271 138 27 253 250 12 36 chr20 40770774 40770858 -25897147 + L2 LINE L2 3191 3272 0 215 59 0 29 chr20 40771328 40771362 -25896643 + (GAAA)n Simple_repeat Simple_repeat 1 33 0 258 328 55 71 chr20 40772276 40772459 -25895546 - L2 LINE L2 -221 3051 2872 964 191 34 19 chr20 40773327 40773536 -25894469 - MER20 DNA MER1_type 0 219 8 600 143 0 11 chr20 40773944 40774035 -25893970 - 5S rRNA rRNA -31 90 1 517 247 38 70 chr20 40774035 40774126 -25893879 + L2 LINE L2 2898 2981 -291 240 100 0 0 chr20 40774126 40774166 -25893839 + (CA)n Simple_repeat Simple_repeat 2 41 0 517 247 38 70 chr20 40774166 40774260 -25893745 + L2 LINE L2 2981 3077 -195 400 299 69 88 chr20 40774553 40774757 -25893248 - MIR SINE MIR -62 200 1 475 150 0 0 chr20 40775650 40775730 -25892275 + MIR SINE MIR 72 151 -111 274 347 147 16 chr20 40775921 40776277 -25891728 - L2 LINE L2 -221 3051 2658 1965 114 55 81 chr20 40776829 40777214 -25890791 + THE1C LTR MaLR 1 375 0 190 271 43 29 chr20 40778843 40778913 -25889092 + MIR SINE MIR 79 149 -113 337 222 71 10 chr20 40780380 40780479 -25887526 - MIR SINE MIR -78 184 80 254 293 152 12 chr20 40780527 40780691 -25887314 - MIR SINE MIR -48 214 28 597 308 90 5 chr20 40780701 40780912 -25887093 + MIR SINE MIR 9 237 -25 1107 239 85 10 chr20 40781611 40782000 -25886005 + LTR16C LTR ERVL 74 491 0 203 254 15 60 chr20 40782086 40782153 -25885852 - L2 LINE L2 -21 3292 3229 479 219 71 15 chr20 40782721 40782866 -25885139 - MIR SINE MIR -48 214 64 755 268 46 61 chr20 40783128 40783281 -25884724 + L2 LINE L2 2912 3066 -247 1684 191 83 31 chr20 40783281 40783725 -25884280 + MLT1C LTR MaLR 1 467 0 755 268 46 61 chr20 40783725 40783963 -25884042 + L2 LINE L2 3066 3297 -16 * 1051 276 76 61 chr20 40783961 40784436 -25883569 - L2 LINE L2 -1 3312 2831 323 188 20 0 chr20 40784456 40784557 -25883448 + (TGGA)n Simple_repeat Simple_repeat 2 104 0 1067 284 133 51 chr20 40785357 40785967 -25882038 + L2 LINE L2 1945 2604 -710 1311 142 26 17 chr20 40786239 40786472 -25881533 + MER46A DNA MER2_type 1 235 -1 392 273 196 7 chr20 40786977 40787120 -25880885 - MER5B DNA MER1_type -6 172 3 736 247 52 56 chr20 40787286 40787537 -25880468 - MIR SINE MIR -5 257 8 327 296 35 35 chr20 40787618 40787733 -25880272 - MER5A DNA MER1_type -68 121 7 535 218 89 0 chr20 40787752 40787876 -25880129 + MLT1F LTR MaLR 1 135 -432 972 208 14 23 chr20 40787980 40788195 -25879810 + MLT1F LTR MaLR 151 363 -179 347 132 19 0 chr20 40788195 40788248 -25879757 - MER94 DNA DNA 0 134 81 350 291 48 0 chr20 40788344 40788447 -25879558 - L2 LINE L2 -514 2800 2693 193 308 118 35 chr20 40788918 40789087 -25878918 - MIR SINE MIR -34 228 46 842 215 59 19 chr20 40790042 40790302 -25877703 - MLT1C LTR MaLR -1 466 176 200 97 32 0 chr20 40790303 40790334 -25877671 + (TG)n Simple_repeat Simple_repeat 1 32 0 1209 189 23 108 chr20 40790341 40790647 -25877358 - AluYb8 SINE Alu -38 280 1 1003 129 12 6 chr20 40790647 40790817 -25877188 - MLT1C LTR MaLR -281 186 16 342 279 202 0 chr20 40790883 40791012 -25876993 - L2 LINE L2 -2 3270 3116 411 297 70 58 chr20 40791495 40791754 -25876251 + L2 LINE L2 3010 3271 -1 207 374 56 0 chr20 40792403 40792510 -25875495 + MIR3 SINE MIR 43 155 -53 475 233 102 84 chr20 40792621 40792718 -25875287 - MER20 DNA MER1_type 0 219 125 2363 56 6 38 chr20 40792718 40793037 -25874968 - AluY SINE Alu -1 310 2 475 233 102 84 chr20 40793037 40793154 -25874851 - MER20 DNA MER1_type -94 125 1 371 279 44 44 chr20 40793233 40793369 -25874636 - L2 LINE L2 0 3313 3178 2558 134 86 42 chr20 40793395 40793874 -25874131 + MLT1D LTR MaLR 4 503 -2 626 305 36 12 chr20 40793926 40794093 -25873912 + MER91A DNA MER1_type 1 171 -25 221 284 40 54 chr20 40794113 40794187 -25873818 + MER91 DNA MER1_type 124 190 0 * 448 322 84 34 chr20 40794187 40794276 -25873729 - L2 LINE L2 -191 3081 2998 2067 91 0 45 chr20 40794276 40794562 -25873443 + AluSx SINE Alu 21 293 -19 448 322 84 34 chr20 40794562 40794815 -25873190 - L2 LINE L2 -274 2998 2249 1407 161 16 81 chr20 40796078 40796400 -25871605 + AluJo SINE Alu 5 305 -7 189 362 0 0 chr20 40796714 40796772 -25871233 - L3 LINE CR1 -107 1470 1413 220 235 20 0 chr20 40796815 40796866 -25871139 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 680 292 63 34 chr20 40797130 40797461 -25870544 + L1ME4a LINE L1 5278 5614 -507 833 231 49 61 chr20 40797497 40797904 -25870101 + L1MC5 LINE L1 7487 7888 -73 3171 85 14 2 chr20 40798016 40798453 -25869552 + L1PA5 LINE L1 5712 6153 -1 2610 88 21 29 chr20 40798457 40798489 -25869516 + L1PB1 LINE L1 5769 5800 -351 306 0 0 0 chr20 40798489 40798523 -25869482 + (CA)n Simple_repeat Simple_repeat 2 35 0 2610 88 21 29 chr20 40798523 40798876 -25869129 + L1PB1 LINE L1 5800 6151 0 562 244 152 32 chr20 40798930 40799278 -25868727 + L1ME4a LINE L1 5663 6052 -69 287 214 0 0 chr20 40799649 40799705 -25868300 + L1ME4a LINE L1 6064 6119 -2 606 325 129 30 chr20 40799737 40800109 -25867896 - L3 LINE CR1 -195 1382 974 1830 204 279 5 chr20 40800123 40800747 -25867258 + LTR50 LTR ERVL 1 795 0 550 287 126 18 chr20 40800747 40800970 -25867035 - L3 LINE CR1 -685 892 646 2052 127 38 0 chr20 40800993 40801285 -25866720 + AluSx SINE Alu 4 306 -6 2020 121 16 47 chr20 40802378 40802700 -25865305 - AluJb SINE Alu 0 312 1 303 246 52 19 chr20 40802885 40802989 -25865016 + MLT1J2 LTR MaLR 56 194 -295 2435 166 35 13 chr20 40803305 40803762 -25864243 - MLT1C LTR MaLR 0 467 1 198 299 65 26 chr20 40804145 40804222 -25863783 + MIR SINE MIR 22 101 -161 451 273 59 55 chr20 40804542 40804713 -25863292 - MIR SINE MIR -61 147 2 212 261 203 14 chr20 40805506 40805644 -25862361 + L2 LINE L2 2810 2973 -299 638 260 72 6 chr20 40806403 40806584 -25861421 + MIR SINE MIR 2 194 -68 409 212 12 0 chr20 40806589 40806674 -25861331 - MER81 DNA DNA 0 114 29 273 75 0 0 chr20 40806688 40806728 -25861277 + (GA)n Simple_repeat Simple_repeat 1 40 0 244 331 0 23 chr20 40807312 40807445 -25860560 + C-rich Low_complexity Low_complexity 5 134 0 2049 141 0 22 chr20 40808273 40808592 -25859413 + AluSx SINE Alu 1 312 0 2615 90 40 11 chr20 40809075 40809429 -25858576 - THE1B LTR MaLR 0 364 1 384 242 72 65 chr20 40809448 40809601 -25858404 - MER103 DNA DNA -3 163 10 544 303 7 0 chr20 40809652 40809807 -25858198 - MIR SINE MIR -50 212 57 272 320 10 0 chr20 40810473 40810576 -25857429 + MLT1L LTR MaLR 512 615 0 253 323 81 10 chr20 40810823 40810922 -25857083 - MIR SINE MIR -138 124 19 272 269 134 15 chr20 40811386 40811520 -25856485 + MIR SINE MIR 86 235 -27 480 294 118 12 chr20 40811960 40812130 -25855875 - MIR SINE MIR -57 205 18 593 262 23 78 chr20 40812272 40812528 -25855477 - LTR16A1 LTR ERVL 0 457 216 23 33 0 0 chr20 40813063 40813093 -25854912 + AT_rich Low_complexity Low_complexity 1 30 0 192 370 11 11 chr20 40813967 40814059 -25853946 - MIR SINE MIR -15 247 156 706 267 126 29 chr20 40814094 40814213 -25853792 + MLT1J2 LTR MaLR 67 173 -277 1090 252 5 0 chr20 40814213 40814435 -25853570 - MER58A DNA MER1_type -1 223 1 706 267 126 29 chr20 40814435 40814663 -25853342 + MLT1J2 LTR MaLR 173 448 -2 368 162 27 14 chr20 40814766 40814840 -25853165 - MER81 DNA DNA 0 114 40 282 206 59 15 chr20 40814840 40814908 -25853097 - MIR SINE MIR -170 92 22 419 278 15 15 chr20 40815416 40815509 -25852496 - L2 LINE L2 -254 3059 2964 1764 158 48 7 chr20 40815509 40815800 -25852205 + AluJb SINE Alu 1 303 -9 419 278 15 15 chr20 40815800 40815839 -25852166 - L2 LINE L2 -348 2965 2927 289 372 28 6 chr20 40815939 40816119 -25851886 - L2 LINE L2 -1230 2084 1901 200 229 114 43 chr20 40816118 40816188 -25851817 - L2 LINE L2 -13 3300 3226 * 216 311 178 22 chr20 40816253 40816478 -25851527 - L2 LINE L2 -177 3095 2836 654 237 0 0 chr20 40816589 40816720 -25851285 + FLAM_A SINE Alu 12 142 0 368 288 110 20 chr20 40816735 40816881 -25851124 + MIR3 SINE MIR 50 208 0 241 300 185 41 chr20 40817412 40817655 -25850350 - L2 LINE L2 -401 2913 2636 379 177 101 0 chr20 40817665 40817744 -25850261 + Charlie5 DNA MER1_type 1 87 -2525 1873 176 23 9 chr20 40817772 40818118 -25849887 - L1PB4 LINE L1 -5 6151 5801 29 0 0 0 chr20 40818125 40818154 -25849851 + AT_rich Low_complexity Low_complexity 1 29 0 1576 188 21 18 chr20 40818165 40818553 -25849452 + Charlie5 DNA MER1_type 2236 2624 0 769 284 74 66 chr20 40818559 40818840 -25849165 - L2 LINE L2 -710 2604 2318 2270 114 0 0 chr20 40818840 40819130 -25848875 + AluSx SINE Alu 1 290 -22 769 284 74 66 chr20 40819130 40819225 -25848780 - L2 LINE L2 -996 2318 2225 201 74 0 0 chr20 40819266 40819293 -25848712 + (CAGA)n Simple_repeat Simple_repeat 4 30 0 543 275 35 0 chr20 40820067 40820209 -25847796 + MIR SINE MIR 9 155 -107 272 44 44 0 chr20 40820340 40820385 -25847620 - L1MB2 LINE L1 0 6171 6125 489 268 78 6 chr20 40820516 40820695 -25847310 + LTR16A1 LTR ERVL 226 417 -40 1934 154 33 13 chr20 40820726 40821032 -25846973 - AluJo SINE Alu 0 312 1 332 167 15 0 chr20 40821032 40821098 -25846907 + MLT1H LTR MaLR 483 549 0 327 296 79 69 chr20 40821115 40821231 -25846774 + L1ME4a LINE L1 5794 5907 -214 2291 125 3 3 chr20 40821231 40821542 -25846463 - AluSx SINE Alu -1 311 1 327 296 79 69 chr20 40821542 40821702 -25846303 + L1ME4a LINE L1 5907 6073 -48 2218 122 0 7 chr20 40821766 40822062 -25845943 - AluSx SINE Alu -18 294 1 700 135 12 0 chr20 40822063 40822183 -25845822 - L1MB2 LINE L1 -52 6119 5999 586 283 31 31 chr20 40822217 40822408 -25845597 - L2 LINE L2 -5 3308 3118 775 269 14 36 chr20 40822424 40822643 -25845362 - MIR SINE MIR -16 246 33 1282 251 70 50 chr20 40822679 40822912 -25845093 - L2 LINE L2 0 3313 3086 2456 102 0 0 chr20 40822912 40823217 -25844788 - AluSx SINE Alu -7 305 1 1282 251 70 50 chr20 40823217 40823532 -25844473 - L2 LINE L2 -227 3086 2749 2931 139 42 4 chr20 40823532 40824013 -25843992 + L1MC2 LINE L1 5845 6343 -1 1282 251 70 50 chr20 40824013 40824275 -25843730 - L2 LINE L2 -564 2749 2494 423 241 97 21 chr20 40824701 40824846 -25843159 - MIR3 SINE MIR -33 175 20 1259 205 82 27 chr20 40824860 40825281 -25842724 - MLT1C LTR MaLR 0 467 18 2471 231 26 17 chr20 40825444 40826029 -25841976 + MLT1E LTR MaLR 1 590 -3 352 270 57 50 chr20 40826042 40826201 -25841804 + L2 LINE L2 2381 2540 -774 1827 187 0 10 chr20 40826364 40826669 -25841336 + AluJo SINE Alu 1 302 -10 294 29 0 0 chr20 40826805 40826840 -25841165 + (CA)n Simple_repeat Simple_repeat 1 35 0 248 280 110 8 chr20 40827459 40827577 -25840428 + L2 LINE L2 2538 2667 -647 290 257 92 66 chr20 40827721 40827873 -25840132 + L2 LINE L2 2906 3061 -211 1435 240 135 16 chr20 40828115 40828464 -25839541 - MLT1H1 LTR MaLR 0 555 130 2239 120 0 3 chr20 40828464 40828764 -25839241 + AluSc SINE Alu 1 299 -10 1435 240 135 16 chr20 40828764 40828902 -25839103 - MLT1H1 LTR MaLR -425 130 10 241 221 12 39 chr20 40828955 40829052 -25838953 + MLT1F1 LTR MaLR 419 520 -30 1554 118 9 5 chr20 40829052 40829272 -25838733 - AluSx SINE Alu -19 293 73 4177 128 15 143 chr20 40829272 40830967 -25837038 - pTR5 LTR ERV1 0 2606 1524 3954 146 105 28 chr20 40830963 40832194 -25835811 + pTR5 LTR ERV1 890 2606 0 * 554 62 0 0 chr20 40832194 40832259 -25835746 - AluSx SINE Alu -237 76 12 358 302 12 0 chr20 40832490 40832576 -25835429 - L2 LINE L2 -12 3260 3174 2112 110 7 3 chr20 40832674 40832974 -25835031 + AluSq SINE Alu 13 313 0 201 274 83 36 chr20 40834054 40834138 -25833867 - L3 LINE CR1 -1074 503 416 865 204 30 12 chr20 40834548 40834715 -25833290 - MER20 DNA MER1_type -19 200 31 674 142 24 65 chr20 40834722 40834891 -25833114 - MER53 DNA DNA -3 186 25 27 0 0 0 chr20 40835141 40835168 -25832837 + AT_rich Low_complexity Low_complexity 1 27 0 912 136 0 0 chr20 40835181 40835313 -25832692 + FLAM_C SINE Alu 9 140 -3 294 365 79 0 chr20 40835472 40835650 -25832355 - L3 LINE CR1 -1072 505 314 339 283 33 33 chr20 40835721 40835901 -25832104 + L1P LINE L1 4916 5095 -1051 1056 279 113 17 chr20 40836066 40836589 -25831416 + L1MC4a LINE L1 5338 5910 -1898 2645 186 43 54 chr20 40836807 40837010 -25830995 + L1ME4a LINE L1 4847 5051 -1070 3520 13 0 0 chr20 40837010 40837386 -25830619 + L1PA3 LINE L1 5762 6152 -3 2645 186 43 54 chr20 40837386 40837696 -25830309 + L1ME4a LINE L1 5051 5363 -758 2034 100 10 30 chr20 40837696 40837997 -25830008 + AluSc SINE Alu 1 295 -14 2645 186 43 54 chr20 40837997 40838464 -25829541 + L1ME4a LINE L1 5363 5855 -266 1616 207 0 0 chr20 40838464 40838759 -25829246 + AluJb SINE Alu 1 295 -17 2645 186 43 54 chr20 40838759 40839019 -25828986 + L1ME4a LINE L1 5855 6116 -5 24 0 0 0 chr20 40839483 40839507 -25828498 + AT_rich Low_complexity Low_complexity 1 24 0 1830 151 3 22 chr20 40839516 40839835 -25828170 + AluSq SINE Alu 1 313 0 418 337 44 8 chr20 40839840 40840092 -25827913 - MIR SINE MIR 0 262 2 239 267 12 35 chr20 40840409 40840495 -25827510 + LTR67 LTR ERVL 470 553 -4 274 154 19 0 chr20 40840500 40840552 -25827453 + L1MD2 LINE L1 5254 5306 -936 * 6788 184 38 30 chr20 40840548 40841089 -25826916 + L1MB7 LINE L1 3728 4263 -1921 1603 192 6 6 chr20 40841089 40841401 -25826604 + AluJb SINE Alu 1 312 0 6788 184 38 30 chr20 40841401 40842300 -25825705 + L1MB7 LINE L1 4263 5154 -1030 1964 149 0 0 chr20 40842300 40842601 -25825404 + AluSg SINE Alu 1 301 -9 6788 184 38 30 chr20 40842601 40843104 -25824901 + L1MB7 LINE L1 5154 5652 -532 2145 102 3 22 chr20 40843104 40843417 -25824588 + AluSq SINE Alu 1 307 -6 6788 184 38 30 chr20 40843417 40843913 -25824092 + L1MB7 LINE L1 5652 6184 0 1868 163 3 3 chr20 40843943 40844269 -25823736 + L1MD2 LINE L1 5283 5608 -634 353 120 4 110 chr20 40844270 40844530 -25823475 + AluSq SINE Alu 2 295 -6 3582 174 47 30 chr20 40844530 40845270 -25822735 + L1MD2 LINE L1 5606 6358 -1 2110 106 0 0 chr20 40845287 40845596 -25822409 + AluSg SINE Alu 1 309 0 296 151 57 0 chr20 40845710 40845763 -25822242 - MIR SINE MIR -97 165 110 2265 222 42 35 chr20 40846551 40847263 -25820742 + L1MC4a LINE L1 5279 5344 -802 397 293 28 65 chr20 40847465 40847665 -25820340 + L2 LINE L2 2791 2974 -298 2223 91 0 3 chr20 40847665 40847962 -25820043 - AluSg SINE Alu -14 296 1 397 293 28 65 chr20 40847962 40848089 -25819916 + L2 LINE L2 2974 3104 -168 283 180 54 90 chr20 40848315 40848359 -25819646 - MER103 DNA DNA -52 114 70 1697 174 48 22 chr20 40848359 40848715 -25819290 - MLT1A1 LTR MaLR 0 365 1 283 180 54 90 chr20 40848715 40848781 -25819224 - MER103 DNA DNA -96 70 8 2008 120 24 0 chr20 40848904 40849195 -25818810 + AluSx SINE Alu 1 298 -14 206 183 183 92 chr20 40851146 40851277 -25816728 - MIR SINE MIR -111 151 9 472 270 73 39 chr20 40851843 40852021 -25815984 + MIR SINE MIR 79 262 0 180 169 91 117 chr20 40852748 40852825 -25815180 - MIR SINE MIR -70 192 118 1803 175 7 0 chr20 40852845 40853154 -25814851 - AluJb SINE Alu -1 311 1 302 224 106 112 chr20 40853165 40853335 -25814670 - L2 LINE L2 -1 3312 3144 464 256 183 40 chr20 40853366 40853639 -25814366 + MLT1H LTR MaLR 1 312 -237 738 319 63 19 chr20 40853814 40854289 -25813716 - L2 LINE L2 -228 3044 2550 801 179 0 21 chr20 40854295 40854440 -25813565 + FLAM_C SINE Alu 2 143 0 341 219 14 0 chr20 40854481 40854554 -25813451 + L1ME1 LINE L1 4822 4895 -1251 1675 138 0 64 chr20 40854614 40854911 -25813094 + AluSx SINE Alu 3 280 -32 22 0 0 0 chr20 40854915 40854937 -25813068 + AT_rich Low_complexity Low_complexity 1 22 0 4373 156 24 26 chr20 40854940 40855864 -25812141 + L1MB8 LINE L1 5128 6037 -141 1009 133 53 27 chr20 40855963 40856151 -25811854 - L1PA16 LINE L1 -6 6160 5968 648 135 20 101 chr20 40856169 40856317 -25811688 + L1MB7 LINE L1 6040 6175 -9 * 1419 201 33 28 chr20 40856314 40856766 -25811239 + L1ME1 LINE L1 4985 5441 -725 1419 224 16 43 chr20 40856766 40857306 -25810699 + L1ME1 LINE L1 5654 6178 0 445 313 44 40 chr20 40857308 40857580 -25810425 - L2 LINE L2 -797 2517 2245 1904 130 0 27 chr20 40857592 40857891 -25810114 + AluSx SINE Alu 1 291 -21 395 299 45 26 chr20 40858508 40858662 -25809343 - MIR SINE MIR -31 231 75 3121 150 36 42 chr20 40859376 40859990 -25808015 - L1MA9 LINE L1 0 6312 5703 898 119 37 22 chr20 40859990 40860153 -25807852 + L1MA9 LINE L1 5562 5720 -446 547 207 69 109 chr20 40860224 40860280 -25807725 + MER5B DNA MER1_type 3 60 -118 1751 114 68 0 chr20 40860280 40860543 -25807462 + AluSx SINE Alu 5 285 -27 414 53 0 0 chr20 40860543 40860600 -25807405 + (CA)n Simple_repeat Simple_repeat 2 58 0 547 207 69 109 chr20 40860600 40860716 -25807289 + MER5B DNA MER1_type 58 169 -9 789 153 204 0 chr20 40860912 40861069 -25806936 - MER5A DNA MER1_type 0 189 1 815 201 19 0 chr20 40861350 40861504 -25806501 + MER5A DNA MER1_type 33 189 0 574 232 130 27 chr20 40861591 40861776 -25806229 - MIR SINE MIR 0 262 59 1969 128 155 11 chr20 40861827 40862201 -25805804 - MSTA LTR MaLR 0 428 1 692 211 23 0 chr20 40862558 40862686 -25805319 + FRAM SINE Alu 1 131 -45 386 240 0 0 chr20 40862949 40863024 -25804981 - MER81 DNA DNA 0 114 40 420 175 82 10 chr20 40863184 40863281 -25804724 - MLT1A1 LTR MaLR 0 374 271 585 210 54 48 chr20 40863296 40863463 -25804542 - MLT1A1 LTR MaLR -197 168 1 429 306 140 5 chr20 40863989 40864175 -25803830 + MIR SINE MIR 52 262 0 737 158 178 65 chr20 40864314 40864561 -25803444 - ORSL DNA AcHobo 0 275 1 2275 88 10 0 chr20 40864592 40864900 -25803105 + AluSx SINE Alu 1 311 -1 358 310 177 4 chr20 40864900 40865305 -25802700 + L2 LINE L2 2538 3021 -251 198 181 0 169 chr20 40865357 40865440 -25802565 + L2 LINE L2 3164 3232 -40 216 235 62 74 chr20 40865796 40865877 -25802128 + MIR3 SINE MIR 109 188 -20 280 283 24 122 chr20 40866846 40867051 -25800954 - MIR SINE MIR -70 192 8 285 259 30 137 chr20 40867100 40867169 -25800836 - MER5B DNA MER1_type -2 176 126 2142 90 10 13 chr20 40867169 40867469 -25800536 + AluSc SINE Alu 1 299 -10 285 259 30 137 chr20 40867469 40867530 -25800475 - MER5B DNA MER1_type -52 126 60 1274 152 15 0 chr20 40867535 40867739 -25800266 - AluJb SINE Alu -20 292 86 226 264 0 0 chr20 40867762 40867815 -25800190 + MER5B DNA MER1_type 125 177 -1 194 340 96 0 chr20 40867920 40868014 -25799991 + MIR SINE MIR 154 256 -6 4006 139 5 5 chr20 40868062 40868686 -25799319 - MER41B LTR ERV1 -9 626 3 1211 279 49 6 chr20 40869355 40869703 -25798302 + LTR16C LTR ERVL 94 456 -35 454 289 70 35 chr20 40869799 40870027 -25797978 + MIR SINE MIR 20 255 -7 1369 113 5 0 chr20 40870215 40870409 -25797596 - MER3 DNA MER1_type 0 209 15 325 285 45 50 chr20 40870428 40870607 -25797398 + MIR SINE MIR 47 224 -38 2523 148 43 19 chr20 40870944 40871410 -25796595 + L1MC1 LINE L1 5857 6333 0 624 298 26 26 chr20 40872415 40872606 -25795399 - L2 LINE L2 -1 3271 3081 823 236 9 69 chr20 40872680 40872780 -25795225 + MIR SINE MIR 55 137 -125 1845 150 7 3 chr20 40872780 40873067 -25794938 + AluJo SINE Alu 1 288 -24 823 236 9 69 chr20 40873067 40873182 -25794823 + MIR SINE MIR 137 257 -5 414 306 114 33 chr20 40873235 40873515 -25794490 - L2 LINE L2 -181 3091 2776 2117 218 86 35 chr20 40873566 40874088 -25793917 + MLT1H LTR MaLR 1 549 0 239 231 46 0 chr20 40874120 40874185 -25793820 + GA-rich Low_complexity Low_complexity 4 71 0 673 234 158 8 chr20 40874929 40875347 -25792658 - LTR33 LTR ERVL 0 521 2 993 187 12 0 chr20 40875483 40875649 -25792356 + Charlie1 DNA MER1_type 1 168 -2593 * 1467 176 111 41 chr20 40875647 40875790 -25792215 + Charlie1 DNA MER1_type 2308 2440 -321 1930 118 10 10 chr20 40875790 40876095 -25791910 + AluSx SINE Alu 1 305 -7 1467 176 111 41 chr20 40876095 40876367 -25791638 + Charlie1 DNA MER1_type 2440 2752 -9 448 321 12 0 chr20 40876373 40876535 -25791470 - MIR SINE MIR -77 185 22 428 169 56 0 chr20 40877121 40877210 -25790795 - MER53 DNA DNA 0 189 96 1997 102 0 7 chr20 40877778 40878062 -25789943 + AluSx SINE Alu 21 302 -10 200 33 0 33 chr20 40878333 40878363 -25789642 + (TTA)n Simple_repeat Simple_repeat 1 29 0 1092 190 10 15 chr20 40878392 40878597 -25789408 - MER20 DNA MER1_type 0 219 16 2132 120 0 0 chr20 40878886 40879194 -25788811 - AluSx SINE Alu -4 308 1 261 139 0 0 chr20 40879226 40879269 -25788736 + (GGGGA)n Simple_repeat Simple_repeat 3 45 0 1208 91 6 0 chr20 40879276 40879305 -25788700 + (GGAA)n Simple_repeat Simple_repeat 1 206 0 1208 91 6 0 chr20 40879305 40879481 -25788524 + (GGAA)n Simple_repeat Simple_repeat 2 178 0 200 59 29 0 chr20 40880205 40880239 -25787766 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 192 152 0 0 chr20 40880771 40880804 -25787201 + G-rich Low_complexity Low_complexity 3 35 0 206 250 0 0 chr20 40881509 40881561 -25786444 + A-rich Low_complexity Low_complexity 1 52 0 270 317 112 43 chr20 40881710 40881871 -25786134 - MIR SINE MIR -44 218 47 461 211 62 31 chr20 40882050 40882178 -25785827 - MIR SINE MIR -71 191 60 648 260 81 6 chr20 40882340 40882513 -25785492 + MIR SINE MIR 13 198 -64 188 256 100 11 chr20 40882824 40882914 -25785091 + L3 LINE CR1 1430 1527 -50 640 299 47 5 chr20 40883114 40883325 -25784680 - MIR SINE MIR -34 228 9 418 327 89 41 chr20 40883422 40883691 -25784314 - L2 LINE L2 -14 3258 2977 312 262 36 0 chr20 40883935 40884019 -25783986 - L1M1 LINE L1 -515 5787 5701 2172 114 0 0 chr20 40884139 40884437 -25783568 - AluSx SINE Alu -14 298 1 4304 103 83 16 chr20 40884839 40885525 -25782480 - L1PA13 LINE L1 0 6163 5432 448 253 75 48 chr20 40886884 40887070 -25780935 + L2 LINE L2 3122 3312 -1 183 231 0 0 chr20 40887157 40887196 -25780809 - MIR SINE MIR -74 188 150 2255 87 3 0 chr20 40887196 40887494 -25780511 + AluSq SINE Alu 1 299 -14 1330 228 115 0 chr20 40887541 40887879 -25780126 - MLT1D LTR MaLR 0 505 129 261 0 0 0 chr20 40887909 40887938 -25780067 + (T)n Simple_repeat Simple_repeat 1 29 0 244 269 65 21 chr20 40888002 40888095 -25779910 - MIR SINE MIR -146 116 20 1635 170 0 11 chr20 40888159 40888471 -25779534 - AluJo SINE Alu 0 314 6 2593 77 2 2 chr20 40888975 40889322 -25778683 - pTR5 LTR ERV1 -77 703 66 384 245 10 0 chr20 40889322 40889420 -25778585 - LTR30 LTR ERV1 -80 642 544 2219 107 0 0 chr20 40889662 40889962 -25778043 + AluSx SINE Alu 1 300 -12 1947 150 0 3 chr20 40890463 40890770 -25777235 + AluSx SINE Alu 1 306 -6 579 308 101 40 chr20 40891333 40891988 -25776017 + HAL1b LINE L1 100 794 -554 6359 95 69 38 chr20 40892009 40892062 -25775943 - L1MA3 LINE L1 0 6305 6255 1664 149 19 16 chr20 40892062 40892371 -25775634 - AluJb SINE Alu -2 310 1 6359 95 69 38 chr20 40892371 40892692 -25775313 - L1MA3 LINE L1 -50 6255 5945 1816 134 3 55 chr20 40892692 40893021 -25774984 - AluSx SINE Alu 0 312 1 6359 95 69 38 chr20 40893021 40893839 -25774166 - L1MA3 LINE L1 -360 5945 3845 23401 144 15 21 chr20 40893864 40895668 -25772337 - L1 LINE L1 -924 6641 4828 2357 90 0 0 chr20 40895668 40895979 -25772026 - AluY SINE Alu 0 311 1 23401 144 15 21 chr20 40895979 40899085 -25768920 - L1 LINE L1 -2737 4828 1781 195 42 0 0 chr20 40899085 40899109 -25768896 + (TC)n Simple_repeat Simple_repeat 2 25 0 23401 144 15 21 chr20 40899109 40900822 -25767183 - L1 LINE L1 -5784 1781 59 227 228 99 69 chr20 40900824 40900925 -25767080 - Charlie3 DNA MER1_type -2602 108 5 * 3716 120 16 0 chr20 40900872 40901388 -25766617 + MER1A DNA MER1_type 6 529 0 326 233 140 150 chr20 40901498 40901812 -25766193 + L1MC4a LINE L1 6414 6724 -1084 1994 142 0 0 chr20 40901822 40902125 -25765880 + AluJb SINE Alu 1 303 -9 293 360 35 0 chr20 40902184 40902298 -25765707 - MIR SINE MIR -98 164 47 191 194 28 0 chr20 40902306 40902342 -25765663 - L2 LINE L2 0 3272 3236 333 284 31 55 chr20 40902895 40903022 -25764983 + L2 LINE L2 3149 3272 0 30 0 0 0 chr20 40903023 40903053 -25764952 + AT_rich Low_complexity Low_complexity 1 30 0 1696 161 20 26 chr20 40903102 40903407 -25764598 + AluJb SINE Alu 1 303 -9 455 265 17 0 chr20 40903421 40903538 -25764467 + MIR SINE MIR 129 247 -15 1038 200 39 80 chr20 40903801 40904253 -25763752 + MLT1A1 LTR MaLR 1 427 -1 198 261 203 0 chr20 40904412 40904481 -25763524 + MIR SINE MIR 177 259 -3 249 33 0 0 chr20 40904848 40904878 -25763127 + (TG)n Simple_repeat Simple_repeat 2 31 0 1966 157 92 61 chr20 40904886 40905136 -25762869 - MLT1D LTR MaLR 0 505 264 1588 168 7 4 chr20 40905136 40905440 -25762565 - AluJb SINE Alu 0 305 1 1966 157 92 61 chr20 40905440 40905678 -25762327 - MLT1D LTR MaLR -241 264 1 2150 105 7 0 chr20 40906896 40907191 -25760814 + AluSq SINE Alu 1 297 -16 288 0 0 0 chr20 40907578 40907610 -25760395 + (TG)n Simple_repeat Simple_repeat 1 32 0 225 114 0 171 chr20 40907631 40907701 -25760304 + L1ME LINE L1 5639 5696 -474 291 93 0 0 chr20 40907731 40907774 -25760231 + (TA)n Simple_repeat Simple_repeat 1 43 0 1987 141 7 0 chr20 40907873 40908178 -25759827 + AluSx SINE Alu 1 307 -5 1249 283 34 24 chr20 40908426 40908788 -25759217 + L1ME3A LINE L1 5436 5793 -377 1849 150 35 40 chr20 40908788 40909007 -25758998 + MER2 DNA MER2_type 1 220 -124 2201 72 9 31 chr20 40909007 40909325 -25758680 + AluY SINE Alu 1 311 0 1849 150 35 40 chr20 40909325 40909349 -25758656 + MER2 DNA MER2_type 220 243 -101 1983 134 3 6 chr20 40909349 40909662 -25758343 + AluSx SINE Alu 1 312 0 1849 150 35 40 chr20 40909662 40909763 -25758242 + MER2 DNA MER2_type 243 344 0 1249 283 34 24 chr20 40909763 40909866 -25758139 + L1ME3A LINE L1 5793 5906 -264 1288 121 44 10 chr20 40909866 40910072 -25757933 + AluSg/x SINE Alu 86 298 -14 241 227 200 45 chr20 40910099 40910209 -25757796 + L1ME3A LINE L1 5975 6101 -69 226 311 0 0 chr20 40910847 40910908 -25757097 - L2 LINE L2 -59 3213 3153 225 315 158 8 chr20 40911030 40911157 -25756848 + L2 LINE L2 3163 3308 -5 360 239 34 0 chr20 40911935 40912023 -25755982 + MER3 DNA MER1_type 1 91 -118 252 171 0 0 chr20 40912010 40912051 -25755954 - MER3 DNA MER1_type -127 82 42 * 715 189 31 78 chr20 40912649 40912698 -25755307 - MIR SINE MIR -6 256 206 1903 120 0 31 chr20 40912698 40912892 -25755113 - AluSx SINE Alu 0 324 142 1962 142 0 13 chr20 40912892 40913208 -25754797 - AluSx SINE Alu 0 312 1 1903 120 0 31 chr20 40913208 40913346 -25754659 - AluSx SINE Alu -182 142 1 715 189 31 78 chr20 40913346 40913485 -25754520 - MIR SINE MIR -56 206 75 564 210 0 0 chr20 40913492 40913611 -25754394 + L1MA7 LINE L1 6173 6291 0 1415 288 131 43 chr20 40913679 40913949 -25754056 + L1MC4a LINE L1 5590 5835 -286 1472 209 0 31 chr20 40913949 40914270 -25753735 + AluJb SINE Alu 1 311 -1 1415 288 131 43 chr20 40914270 40914728 -25753277 + L1MC4a LINE L1 5835 5316 -805 2202 101 0 10 chr20 40914728 40915036 -25752969 - AluSp SINE Alu -8 305 1 1415 288 131 43 chr20 40915036 40915588 -25752417 + L1MC4a LINE L1 5315 5817 -304 786 101 0 0 chr20 40915600 40915709 -25752296 + L1MA5 LINE L1 6183 6291 -9 2030 132 3 10 chr20 40915729 40916040 -25751965 - AluSq SINE Alu -4 309 1 479 148 47 27 chr20 40916186 40916335 -25751670 + GA-rich Low_complexity Low_complexity 3 154 0 1311 214 59 52 chr20 40916359 40916780 -25751225 + L1MC5 LINE L1 6963 7386 -575 399 93 19 0 chr20 40916780 40916834 -25751171 - Charlie3 DNA MER1_type -4 2706 2652 1603 118 49 151 chr20 40916897 40917201 -25750804 - Charlie3 DNA MER1_type -33 2677 32 321 214 24 36 chr20 40917201 40917285 -25750720 + L1MC5 LINE L1 7363 7445 -516 234 0 0 0 chr20 40917287 40917313 -25750692 + (TA)n Simple_repeat Simple_repeat 2 27 0 1303 111 0 0 chr20 40917313 40917493 -25750512 - AluSx SINE Alu -3 309 130 819 146 8 0 chr20 40917558 40917688 -25750317 - AluSx SINE Alu -182 131 1 1038 222 43 65 chr20 40917767 40917890 -25750115 + L1MC5 LINE L1 7476 7600 -361 189 0 0 0 chr20 40917890 40917911 -25750094 + (CA)n Simple_repeat Simple_repeat 2 22 0 198 0 0 0 chr20 40917916 40917938 -25750067 + (TA)n Simple_repeat Simple_repeat 2 23 0 1564 128 117 8 chr20 40917938 40918203 -25749802 - AluSg1 SINE Alu -15 294 1 1038 222 43 65 chr20 40918203 40918426 -25749579 + L1MC5 LINE L1 7603 7819 -142 2282 57 0 30 chr20 40918426 40918725 -25749280 + AluY SINE Alu 1 290 -21 1038 222 43 65 chr20 40918725 40918830 -25749175 + L1MC5 LINE L1 7819 7925 -36 5997 135 25 52 chr20 40918978 40919320 -25748685 + L1MA6 LINE L1 4782 5132 -1168 1855 150 0 7 chr20 40919320 40919613 -25748392 + AluSx SINE Alu 1 291 -21 5997 135 25 52 chr20 40919613 40920169 -25747836 + L1MA6 LINE L1 5132 5701 -599 1985 135 0 3 chr20 40920169 40920465 -25747540 + AluSg SINE Alu 1 295 -15 207 0 0 0 chr20 40920466 40920489 -25747516 + (GGAAA)n Simple_repeat Simple_repeat 3 25 0 5997 135 25 52 chr20 40920489 40920774 -25747231 + L1MA6 LINE L1 5701 5992 -308 1664 147 13 40 chr20 40920774 40920914 -25747091 + AluJo SINE Alu 6 148 -164 2232 79 0 10 chr20 40920914 40921206 -25746799 + AluSg SINE Alu 6 294 -16 1664 147 13 40 chr20 40921206 40921365 -25746640 + AluJo SINE Alu 148 297 -15 5997 135 25 52 chr20 40921365 40921720 -25746285 + L1MA6 LINE L1 5992 6300 0 2386 81 0 0 chr20 40921847 40922157 -25745848 - AluY SINE Alu -1 310 1 657 277 28 0 chr20 40922157 40922323 -25745682 + L2 LINE L2 2875 3048 -265 2207 98 0 13 chr20 40922327 40922643 -25745362 + AluSx SINE Alu 1 312 0 253 242 105 21 chr20 40922725 40922820 -25745185 - MLT1I LTR MaLR -25 384 282 500 293 73 37 chr20 40922874 40923147 -25744858 - MLT1I LTR MaLR -124 285 3 291 255 66 4 chr20 40923272 40923389 -25744616 - MIR SINE MIR -57 151 21 1808 155 10 7 chr20 40923795 40924098 -25743907 + AluJb SINE Alu 1 304 -8 921 237 16 1 chr20 40924598 40924804 -25743201 - MIR SINE MIR -28 234 27 245 278 33 56 chr20 40924824 40924914 -25743091 - MIR SINE MIR -158 104 17 261 311 126 0 chr20 40924947 40925050 -25742955 + MIR SINE MIR 59 174 -88 191 350 98 16 chr20 40925546 40925669 -25742336 - MIR SINE MIR -60 148 16 9133 148 120 15 chr20 40925964 40927551 -25740454 - MER52A LTR ERV1 -2 1753 1 355 265 59 0 chr20 40927552 40927654 -25740351 - MIR SINE MIR -64 198 91 * 401 326 150 28 chr20 40927649 40928433 -25739572 + L2 LINE L2 2233 3118 -154 254 226 0 0 chr20 40928504 40928557 -25739448 - MER33 DNA MER1_type 0 363 311 1234 167 124 14 chr20 40928559 40928644 -25739361 + AluJb SINE Alu 1 75 -237 2785 10 0 0 chr20 40928644 40928955 -25739050 - AluYa5 SINE Alu 0 311 1 1234 167 124 14 chr20 40928955 40929144 -25738861 + AluJb SINE Alu 75 305 -7 1137 211 5 5 chr20 40929155 40929378 -25738627 - AluJb SINE Alu -89 223 1 1072 170 129 0 chr20 40929378 40929619 -25738386 - MER33 DNA MER1_type -52 272 1 318 250 71 0 chr20 40930118 40930202 -25737803 + L3 LINE CR1 1285 1374 -203 261 224 35 82 chr20 40930269 40930354 -25737651 + L3 LINE CR1 1391 1471 -106 1675 127 39 11 chr20 40930590 40930873 -25737132 - AluSg SINE Alu -19 291 1 2083 110 0 0 chr20 40930917 40931208 -25736797 + AluSc SINE Alu 14 304 -5 414 266 78 0 chr20 40931872 40932000 -25736005 + MIR SINE MIR 72 209 -53 417 20 0 0 chr20 40932265 40932315 -25735690 + (CA)n Simple_repeat Simple_repeat 1 50 0 487 247 0 80 chr20 40932973 40933094 -25734911 - L2 LINE L2 0 3313 3204 2132 68 0 41 chr20 40933094 40933413 -25734592 + AluY SINE Alu 1 307 0 487 247 0 80 chr20 40933413 40933440 -25734565 - L2 LINE L2 -109 3204 3176 297 0 0 0 chr20 40933539 40933572 -25734433 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 1960 134 3 0 chr20 40933574 40933858 -25734147 - AluSx SINE Alu -27 285 1 194 235 0 0 chr20 40933862 40933896 -25734109 + MIR SINE MIR 117 150 -112 2113 107 0 7 chr20 40933896 40934194 -25733811 + AluSp SINE Alu 1 296 -17 1142 284 46 20 chr20 40934281 40934372 -25733633 - L2 LINE L2 0 3313 3226 1374 218 16 19 chr20 40934372 40934679 -25733326 + AluJo SINE Alu 1 306 -6 1142 284 46 20 chr20 40934679 40935170 -25732835 - L2 LINE L2 -87 3226 2711 441 0 0 0 chr20 40935170 40935219 -25732786 + (TTTTG)n Simple_repeat Simple_repeat 3 51 0 2056 106 4 0 chr20 40935226 40935501 -25732504 - AluSx SINE Alu -36 276 1 2147 112 0 10 chr20 40935507 40935821 -25732184 - AluSx SINE Alu -1 311 1 285 29 0 0 chr20 40935823 40935857 -25732148 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 1425 170 22 11 chr20 40935861 40936138 -25731867 - AluJo SINE Alu -32 280 1 1715 294 85 9 chr20 40936167 40936404 -25731601 - L2 LINE L2 -607 2707 2490 2247 108 0 0 chr20 40936404 40936699 -25731306 + AluSg SINE Alu 2 296 -14 1715 294 85 9 chr20 40936699 40937023 -25730982 - L2 LINE L2 -824 2490 2103 358 298 23 58 chr20 40937950 40938121 -25729884 + L2 LINE L2 1698 1862 -1452 1030 309 77 68 chr20 40938126 40938553 -25729452 + L2 LINE L2 2174 2596 -676 1385 212 13 30 chr20 40938553 40938855 -25729150 - AluJo SINE Alu -15 297 1 1030 309 77 68 chr20 40938855 40938885 -25729120 + L2 LINE L2 2596 2624 -648 1596 151 133 0 chr20 40938885 40939029 -25728976 - AluSx SINE Alu -5 307 183 351 0 0 0 chr20 40939029 40939068 -25728937 + (TG)n Simple_repeat Simple_repeat 2 40 0 1596 151 133 0 chr20 40939068 40939194 -25728811 - AluSx SINE Alu -129 183 1 1030 309 77 68 chr20 40939194 40939778 -25728227 + L2 LINE L2 2624 3237 -35 414 0 0 0 chr20 40939783 40939829 -25728176 + (TG)n Simple_repeat Simple_repeat 1 46 0 307 345 110 20 chr20 40939934 40940180 -25727825 - L2 LINE L2 -815 2499 2232 2298 103 3 0 chr20 40940188 40940479 -25727526 + AluSx SINE Alu 1 292 -20 775 283 29 29 chr20 40940872 40941112 -25726893 + MIR SINE MIR 12 251 -11 2448 60 7 0 chr20 40942440 40942739 -25725266 - AluSp SINE Alu -12 301 1 1493 181 49 0 chr20 40943234 40943499 -25724506 - AluJb SINE Alu -24 288 11 278 278 49 56 chr20 40943595 40943757 -25724248 - MLT1K LTR MaLR -234 354 194 1492 97 5 0 chr20 40944010 40944196 -25723809 + U2 snRNA snRNA 1 187 -1 2202 112 0 3 chr20 40944268 40944562 -25723443 - AluSx SINE Alu -19 293 1 1034 79 0 22 chr20 40944562 40944701 -25723304 - AluSq/x SINE Alu -176 136 1 308 248 48 19 chr20 40944710 40944815 -25723190 - MER103 DNA DNA -15 151 44 285 220 64 18 chr20 40944991 40945100 -25722905 + MER113 DNA MER1_type? 1 114 -407 2267 109 13 0 chr20 40945465 40945767 -25722238 + AluSg SINE Alu 1 306 -4 259 273 33 23 chr20 40945961 40946066 -25721939 + MIR SINE MIR 1 105 -116 512 277 8 8 chr20 40946107 40946226 -25721779 - MIR SINE MIR -129 133 15 365 307 34 45 chr20 40946254 40946433 -25721572 - L2 LINE L2 -19 3294 3118 2176 120 7 0 chr20 40946451 40946760 -25721245 - AluSx SINE Alu -1 311 1 240 302 47 28 chr20 40947079 40947185 -25720820 - L2 LINE L2 -582 2732 2625 1751 138 64 17 chr20 40947207 40947504 -25720501 - AluJb SINE Alu -1 311 1 276 238 0 16 chr20 40947918 40947981 -25720024 + L2 LINE L2 3206 3267 -5 24 0 0 0 chr20 40948063 40948087 -25719918 + AT_rich Low_complexity Low_complexity 1 24 0 209 148 34 80 chr20 40948909 40948997 -25719008 + (CCCGG)n Simple_repeat Simple_repeat 5 88 0 24 53 0 0 chr20 40949285 40949323 -25718682 + GC_rich Low_complexity Low_complexity 1 38 0 216 214 36 0 chr20 40949582 40949638 -25718367 + CT-rich Low_complexity Low_complexity 1 58 0 434 272 110 53 chr20 40950681 40950909 -25717096 - L2 LINE L2 -18 3254 3014 588 220 46 40 chr20 40951357 40951530 -25716475 - MIR SINE MIR 0 262 89 180 0 0 0 chr20 40953153 40953173 -25714832 + (A)n Simple_repeat Simple_repeat 1 20 0 1676 160 29 7 chr20 40954714 40954989 -25713016 - AluJo SINE Alu -31 281 1 2530 66 0 0 chr20 40956633 40956935 -25711070 - AluY SINE Alu -9 302 1 272 270 123 74 chr20 40958021 40958184 -25709821 + MIR SINE MIR 49 219 -43 1893 138 3 26 chr20 40958509 40958813 -25709192 + AluJb SINE Alu 1 297 -15 2433 57 3 10 chr20 40959429 40959728 -25708277 + AluY SINE Alu 1 297 -14 1393 111 10 5 chr20 40960432 40960630 -25707375 + AluSg/x SINE Alu 105 303 -9 1609 144 45 8 chr20 40961001 40961265 -25706740 + AluJo SINE Alu 31 304 -8 291 271 66 88 chr20 40961411 40961592 -25706413 - MER5A DNA MER1_type -6 183 7 198 0 0 0 chr20 40961692 40961714 -25706291 + (ATG)n Simple_repeat Simple_repeat 2 23 0 1917 143 0 3 chr20 40961728 40962015 -25705990 - AluSx SINE Alu -26 286 1 2821 133 23 12 chr20 40962450 40962878 -25705127 - Tigger2a DNA MER2_type -1 433 1 900 201 16 16 chr20 40962878 40963061 -25704944 + MER5A DNA MER1_type 3 186 -3 2460 63 7 0 chr20 40963800 40964101 -25703904 + AluSp SINE Alu 1 303 -10 522 156 0 0 chr20 40964501 40964578 -25703427 + MER3 DNA MER1_type 9 85 -124 1755 157 11 4 chr20 40964613 40964893 -25703112 - AluSx SINE Alu -30 282 1 219 36 0 0 chr20 40964949 40964977 -25703028 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 213 200 50 50 chr20 40965302 40965362 -25702643 - MIR SINE MIR -46 216 157 303 293 81 102 chr20 40965944 40966190 -25701815 - MIR SINE MIR -3 259 19 301 176 20 0 chr20 40966970 40967021 -25700984 + MER58B DNA MER1_type 44 95 -246 1939 134 46 3 chr20 40967023 40967330 -25700675 + MER7A DNA MER2_type 2 319 -27 1081 236 24 24 chr20 40967313 40967567 -25700438 + MER58B DNA MER1_type 84 337 -4 * 28 0 0 0 chr20 40967890 40967918 -25700087 + AT_rich Low_complexity Low_complexity 1 28 0 244 295 0 0 chr20 40968305 40968366 -25699639 - MIR SINE MIR -64 144 84 26 30 0 0 chr20 40968589 40968622 -25699383 + AT_rich Low_complexity Low_complexity 1 33 0 187 204 318 23 chr20 40969482 40969570 -25698435 + L2 LINE L2 3200 3313 0 2216 112 3 3 chr20 40969818 40970123 -25697882 - AluSq SINE Alu -8 305 1 233 250 0 0 chr20 40971817 40971865 -25696140 + MIR SINE MIR 98 145 -63 205 204 74 37 chr20 40971955 40972009 -25695996 - MIR SINE MIR -150 112 57 2093 137 3 0 chr20 40972514 40972814 -25695191 + AluSx SINE Alu 1 301 -11 291 295 29 29 chr20 40973022 40973127 -25694878 + L2 LINE L2 2953 3057 -215 351 265 43 17 chr20 40973660 40973777 -25694228 - L1MC/D LINE L1 -2137 5671 5552 251 210 32 0 chr20 40973780 40973842 -25694163 - HsTC2 DNA Tc2 -1830 68 5 2713 83 23 54 chr20 40973923 40974310 -25693695 + THE1C LTR MaLR 1 375 0 205 279 0 0 chr20 40974492 40974535 -25693470 + L2 LINE L2 3145 3187 -85 433 235 69 78 chr20 40975760 40975977 -25692028 - L1MC5 LINE L1 -35 7926 7712 248 293 183 45 chr20 40975998 40976244 -25691761 - L3 LINE CR1 -61 1516 1237 1420 208 27 10 chr20 40976294 40976587 -25691418 - AluJo SINE Alu -14 298 1 1966 94 4 22 chr20 40976784 40977059 -25690946 + AluSx SINE Alu 1 270 -42 1199 87 0 0 chr20 40977059 40977209 -25690796 + AluSg/x SINE Alu 155 304 -8 297 271 99 13 chr20 40977364 40977515 -25690490 - L1ME4a LINE L1 -5 6116 5953 2166 236 90 12 chr20 40978056 40978565 -25689440 - MLT1F1 LTR MaLR 0 567 19 400 238 67 98 chr20 40978586 40978687 -25689318 + L1ME1 LINE L1 4810 4906 -1240 3261 104 13 11 chr20 40978687 40979138 -25688867 + L1PA13 LINE L1 5710 6161 -2 400 238 67 98 chr20 40979138 40979200 -25688805 + L1ME1 LINE L1 4906 4968 -1178 450 0 0 0 chr20 40979215 40979265 -25688740 + (TAAA)n Simple_repeat Simple_repeat 2 51 0 518 237 0 0 chr20 40979272 40979369 -25688636 + FLAM_A SINE Alu 8 104 -38 3133 223 73 17 chr20 40979418 40980398 -25687607 + L1ME1 LINE L1 5054 6078 -88 1142 218 87 60 chr20 40980428 40980763 -25687242 + MER2 DNA MER2_type 1 344 0 1050 244 57 3 chr20 40982403 40982719 -25685286 + L1M4 LINE L1 2361 2693 -3453 5998 128 50 3 chr20 40982744 40984107 -25683898 - L1PA16 LINE L1 -5 6161 4764 268 224 69 0 chr20 40984135 40984193 -25683812 + L1M4 LINE L1 2676 2737 -3409 274 287 66 149 chr20 40984371 40984702 -25683303 + L2 LINE L2 2886 3177 -95 2137 109 3 3 chr20 40984702 40985010 -25682995 - AluSx SINE Alu 0 308 1 274 287 66 149 chr20 40985010 40985099 -25682906 + L2 LINE L2 3177 3272 0 1748 179 151 46 chr20 40985212 40985716 -25682289 - L1MB4 LINE L1 -8 6172 5616 242 226 48 0 chr20 40986112 40986174 -25681831 + MIR SINE MIR 70 134 -128 2472 72 7 0 chr20 40986353 40986659 -25681346 - AluY SINE Alu -3 308 1 2317 88 0 3 chr20 40986927 40987224 -25680781 - AluSg SINE Alu -14 296 1 1356 179 70 25 chr20 40988215 40988500 -25679505 - AluJo SINE Alu -14 298 1 303 314 29 0 chr20 40989269 40989371 -25678634 + MIR SINE MIR 63 167 -95 709 235 138 0 chr20 40990616 40990812 -25677193 + MIR SINE MIR 7 229 -33 2324 99 3 10 chr20 40991136 40991450 -25676555 - AluSx SINE Alu 0 312 1 181 271 51 17 chr20 40992558 40992617 -25675388 - MER5A DNA MER1_type -88 101 41 260 71 48 0 chr20 40993179 40993221 -25674784 + A-rich Low_complexity Low_complexity 1 44 0 447 290 65 12 chr20 40993443 40993612 -25674393 + MIR SINE MIR 48 225 -37 200 109 0 65 chr20 40994897 40994943 -25673062 + (TTTTTG)n Simple_repeat Simple_repeat 4 46 0 21 0 0 0 chr20 40994967 40994988 -25673017 + AT_rich Low_complexity Low_complexity 1 21 0 2429 56 0 0 chr20 40994988 40995276 -25672729 - AluY SINE Alu -23 288 1 258 303 0 0 chr20 40995302 40995391 -25672614 - L1ME LINE L1 -459 5662 5574 248 316 20 0 chr20 40995993 40996091 -25671914 + A-rich Low_complexity Low_complexity 3 102 0 726 182 0 28 chr20 40996882 40997025 -25670980 - FLAM_C SINE Alu -4 139 1 364 204 57 0 chr20 40997771 40997859 -25670146 - L1MB7 LINE L1 -77 6107 6015 237 226 38 0 chr20 40999691 40999744 -25668261 + MIR SINE MIR 129 183 -79 198 91 0 0 chr20 41000644 41000677 -25667328 + (TTTTA)n Simple_repeat Simple_repeat 3 35 0 426 257 60 53 chr20 41001438 41001700 -25666305 + L2 LINE L2 2723 2991 -281 904 249 51 24 chr20 41002079 41002332 -25665673 - MIR SINE MIR 0 262 3 180 378 111 0 chr20 41003282 41003417 -25664588 + MIR3 SINE MIR 50 199 -9 205 279 213 0 chr20 41004116 41004177 -25663828 + MIR3 SINE MIR 126 199 -9 264 306 92 24 chr20 41005021 41005227 -25662778 + L1ME LINE L1 5366 5585 -536 2447 92 0 0 chr20 41005786 41006091 -25661914 + AluSx SINE Alu 1 305 -7 187 237 0 0 chr20 41006267 41006305 -25661700 + L2 LINE L2 3276 3313 0 23 33 0 0 chr20 41007497 41007527 -25660478 + AT_rich Low_complexity Low_complexity 1 30 0 2283 84 0 16 chr20 41008022 41008332 -25659673 + AluY SINE Alu 1 305 -6 186 311 14 14 chr20 41008556 41008630 -25659375 + MIR3 SINE MIR 122 195 -13 3807 166 62 18 chr20 41008639 41008823 -25659182 - L1MB3 LINE L1 0 6183 6008 2444 84 0 3 chr20 41008823 41009131 -25658874 - AluSx SINE Alu -5 307 1 3807 166 62 18 chr20 41009131 41009770 -25658235 - L1MB3 LINE L1 -175 6008 5324 2280 96 0 17 chr20 41009782 41010084 -25657921 - AluSx SINE Alu -15 297 1 1649 188 96 15 chr20 41010132 41010312 -25657693 - L1MB3 LINE L1 -815 5331 5167 1971 144 0 10 chr20 41010312 41010611 -25657394 - AluSx SINE Alu -16 296 1 1649 188 96 15 chr20 41010611 41010887 -25657118 - L1MB3 LINE L1 -979 5167 4838 25 0 0 0 chr20 41011003 41011028 -25656977 + AT_rich Low_complexity Low_complexity 1 25 0 341 241 137 20 chr20 41011067 41011344 -25656661 + L1MC5 LINE L1 7503 7908 -134 2206 82 0 31 chr20 41011358 41011651 -25656354 - AluSg SINE Alu -8 302 19 198 307 53 61 chr20 41011724 41011838 -25656167 + L2 LINE L2 2262 2374 -940 245 362 0 9 chr20 41013201 41013317 -25654688 + CT-rich Low_complexity Low_complexity 2 116 0 182 161 0 0 chr20 41013482 41013513 -25654492 - MER5A DNA MER1_type -158 31 1 1141 161 0 0 chr20 41013708 41013888 -25654117 + AluJb SINE Alu 133 312 0 1949 146 23 13 chr20 41014842 41015151 -25652854 - AluSx SINE Alu 0 312 1 2136 109 7 3 chr20 41015879 41016173 -25651832 - AluSx SINE Alu -17 295 1 519 213 207 7 chr20 41016291 41016441 -25651564 - MER5A DNA MER1_type 0 189 10 564 169 67 128 chr20 41018625 41018820 -25649185 + MER58A DNA MER1_type 42 224 0 3507 185 73 3 chr20 41020207 41020892 -25647113 - MER44D DNA MER2_type 0 605 1 412 279 16 39 chr20 41021355 41021484 -25646521 - L2 LINE L2 0 3272 3147 2216 100 0 0 chr20 41022133 41022422 -25645583 + AluSx SINE Alu 1 289 -23 284 119 226 18 chr20 41022847 41022959 -25645046 + L1MB3 LINE L1 6041 6181 -2 238 313 61 62 chr20 41022974 41023191 -25644814 - MIR SINE MIR -38 224 8 227 150 50 0 chr20 41023403 41023443 -25644562 - L2 LINE L2 -251 3062 3021 470 294 30 51 chr20 41023520 41023717 -25644288 + L2 LINE L2 2885 3077 -195 464 312 86 68 chr20 41023923 41024247 -25643758 - L2 LINE L2 -457 2857 2528 1951 138 11 3 chr20 41025317 41025600 -25642405 - AluSx SINE Alu -27 285 1 880 248 92 72 chr20 41025832 41026554 -25641451 - L1M4 LINE L1 -1112 5034 4291 21 71 0 0 chr20 41026678 41026720 -25641285 + AT_rich Low_complexity Low_complexity 1 42 0 300 271 68 17 chr20 41026818 41026936 -25641069 - L1MEc LINE L1 -4643 1753 1630 652 300 90 70 chr20 41027034 41027581 -25640424 - L1MEc LINE L1 -4888 1317 760 202 290 0 0 chr20 41027586 41027648 -25640357 + T-rich Low_complexity Low_complexity 2 63 0 402 129 65 0 chr20 41027733 41027795 -25640210 - AluJ/FLAM SINE Alu -246 66 1 1220 191 66 44 chr20 41029146 41029809 -25638196 + L1ME2 LINE L1 5001 5882 -282 1919 135 14 7 chr20 41029809 41030105 -25637900 + AluSx SINE Alu 1 298 -14 1220 191 66 44 chr20 41030105 41030239 -25637766 + L1ME2 LINE L1 5882 6012 -152 253 143 41 0 chr20 41031408 41031457 -25636548 - Alu SINE Alu -6 296 246 839 159 0 28 chr20 41032377 41032522 -25635483 - AluSg/x SINE Alu -37 275 135 419 278 46 13 chr20 41032818 41032969 -25635036 + MER112 DNA MER1_type 51 206 -54 198 208 0 75 chr20 41033197 41033250 -25634755 + L3b LINE CR1 1293 1341 -242 2061 69 46 56 chr20 41033401 41033705 -25634300 + AluY SINE Alu 1 301 -10 186 314 70 23 chr20 41033995 41034081 -25633924 - L2 LINE L2 -1 3271 3182 1011 170 0 29 chr20 41034084 41034255 -25633750 + FAM SINE Alu 1 41 -8 377 139 109 10 chr20 41034736 41034837 -25633168 + L1MC4 LINE L1 7739 7849 -193 284 208 80 40 chr20 41035001 41035126 -25632879 + L1MC4 LINE L1 7907 8036 -6 1347 174 107 0 chr20 41035622 41035875 -25632130 + AluJb SINE Alu 1 280 -32 1475 186 71 4 chr20 41036876 41037145 -25630860 + AluJo SINE Alu 1 287 -25 2548 36 10 3 chr20 41037186 41037490 -25630515 - AluY SINE Alu -5 306 1 300 149 0 0 chr20 41037586 41037633 -25630372 + Charlie4a DNA MER1_type 120 166 -342 226 310 40 30 chr20 41038586 41038686 -25629319 - L2 LINE L2 -5 3267 3167 962 188 131 34 chr20 41038840 41039138 -25628867 - Charlie4a DNA MER1_type -90 418 92 816 179 0 0 chr20 41039138 41039272 -25628733 + AluJo SINE Alu 1 134 -178 230 314 29 9 chr20 41039426 41039531 -25628474 - L1ME LINE L1 -461 5660 5554 2338 67 0 3 chr20 41040548 41040845 -25627160 - AluY SINE Alu -13 298 3 599 254 65 52 chr20 41042652 41042884 -25625121 + MIR SINE MIR 2 236 -26 31 26 0 0 chr20 41043746 41043784 -25624221 + AT_rich Low_complexity Low_complexity 1 38 0 584 218 176 9 chr20 41046257 41046473 -25621532 - L1MB8 LINE L1 -49 6129 5878 495 275 98 41 chr20 41046538 41046854 -25621151 + L2 LINE L2 2156 2489 -825 333 0 0 0 chr20 41047182 41047219 -25620786 + (TG)n Simple_repeat Simple_repeat 2 38 0 1959 84 88 0 chr20 41047231 41047505 -25620500 - AluSg SINE Alu -12 298 1 677 247 27 14 chr20 41047531 41047677 -25620328 + AluJo SINE Alu 134 281 -31 494 253 108 0 chr20 41047698 41047884 -25620121 + L1MC5 LINE L1 7709 7914 -47 7965 20 3 0 chr20 41047894 41049009 -25618996 - L1PA3 LINE L1 -3 6152 5037 4734 16 0 0 chr20 41049009 41049582 -25618423 + L1PA3 LINE L1 4457 5029 -1117 2059 120 3 7 chr20 41049582 41049881 -25618124 - AluSx SINE Alu -14 298 1 1640 184 0 35 chr20 41049903 41050219 -25617786 - AluJo SINE Alu -6 306 2 1459 156 79 18 chr20 41050388 41050713 -25617292 + L1ME1 LINE L1 5824 6163 -3 2264 71 10 3 chr20 41050753 41051048 -25616957 + AluSq SINE Alu 1 297 -16 253 337 42 11 chr20 41051473 41051568 -25616437 + L2 LINE L2 3066 3163 -109 2028 88 39 26 chr20 41052184 41052492 -25615513 + AluSx SINE Alu 1 312 0 605 282 49 0 chr20 41052955 41053118 -25614887 + LTR16A LTR ERVL 1 171 -279 650 253 44 6 chr20 41053150 41053332 -25614673 + LTR16A LTR ERVL 262 450 0 882 124 22 0 chr20 41053349 41053486 -25614519 + AluSp/q SINE Alu 172 311 -2 559 237 254 0 chr20 41053558 41053735 -25614270 + MIR SINE MIR 20 241 -21 181 217 65 0 chr20 41053711 41053757 -25614248 - MIR SINE MIR -21 241 193 * 286 327 173 20 chr20 41054416 41054768 -25613237 + L2 LINE L2 2818 3223 -49 403 332 59 16 chr20 41054975 41055162 -25612843 + MIR SINE MIR 30 224 -38 395 279 231 24 chr20 41055687 41056138 -25611867 - L2 LINE L2 -405 2909 2366 22 56 0 0 chr20 41057181 41057217 -25610788 + GC_rich Low_complexity Low_complexity 1 36 0 667 279 80 0 chr20 41059304 41059505 -25608500 + MIR SINE MIR 46 262 0 185 320 93 0 chr20 41060634 41060709 -25607296 - MIR SINE MIR -118 144 63 184 344 106 62 chr20 41061778 41062098 -25605907 - L2 LINE L2 0 3272 2939 558 257 81 59 chr20 41062415 41062637 -25605368 + MIR SINE MIR 8 234 -28 236 249 179 64 chr20 41063503 41063676 -25604329 + MIR SINE MIR 38 230 -32 273 260 126 63 chr20 41063931 41064058 -25603947 - MIR SINE MIR -71 191 57 2194 88 3 10 chr20 41067374 41067671 -25600334 + AluSg SINE Alu 1 295 -15 301 309 57 0 chr20 41068433 41068556 -25599449 - L2 LINE L2 -62 3251 3122 513 231 47 47 chr20 41068653 41068822 -25599183 + MIR SINE MIR 21 189 -73 690 346 86 25 chr20 41069119 41069711 -25598294 - L2 LINE L2 -759 2555 1928 1428 187 19 4 chr20 41069717 41069984 -25598021 + AluJb SINE Alu 1 271 -41 916 133 0 0 chr20 41069990 41070125 -25597880 + FLAM_C SINE Alu 1 135 -8 407 360 6 31 chr20 41070678 41070839 -25597166 + L2 LINE L2 3116 3272 0 220 212 159 44 chr20 41071085 41071198 -25596807 + MIR3 SINE MIR 59 184 -24 1261 179 7 84 chr20 41073073 41073370 -25594635 - AluJo SINE Alu -4 308 35 1949 112 4 0 chr20 41073424 41073693 -25594312 + AluSx SINE Alu 5 274 -38 295 299 8 43 chr20 41073828 41073945 -25594060 - MIR SINE MIR -43 219 107 302 231 88 0 chr20 41075624 41075733 -25592272 - MIR SINE MIR -65 143 63 333 0 0 0 chr20 41077010 41077047 -25590958 + (TG)n Simple_repeat Simple_repeat 2 38 0 218 283 87 49 chr20 41077580 41077764 -25590241 - L2 LINE L2 -429 2885 2695 405 329 50 28 chr20 41078355 41078603 -25589402 - MIR SINE MIR -12 250 3 252 281 122 36 chr20 41078606 41078745 -25589260 - MIR3 SINE MIR -40 168 18 2117 246 236 19 chr20 41080304 41081306 -25586699 - L2 LINE L2 -474 2840 1621 262 236 56 0 chr20 41081322 41081394 -25586611 + MIR SINE MIR 117 192 -70 264 91 0 0 chr20 41082017 41082061 -25585944 + (T)n Simple_repeat Simple_repeat 1 44 0 226 299 103 26 chr20 41082064 41082181 -25585824 - MIR3 SINE MIR -72 136 11 309 287 0 9 chr20 41090259 41090367 -25577638 - L2 LINE L2 -961 2353 2247 2563 69 0 0 chr20 41091110 41091415 -25576590 + AluSx SINE Alu 1 305 -7 334 227 311 15 chr20 41096740 41096872 -25571133 - MER5B DNA MER1_type -7 171 1 2563 64 0 0 chr20 41099437 41099735 -25568270 - AluSx SINE Alu -14 298 1 224 215 0 46 chr20 41102959 41103024 -25564981 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 4542 169 60 16 chr20 41105800 41106846 -25561159 - L1MB4 LINE L1 -10 6406 5285 1534 156 55 59 chr20 41106846 41107153 -25560852 + AluJo SINE Alu 1 306 -6 4542 169 60 16 chr20 41107153 41107583 -25560422 - L1MB4 LINE L1 -1131 5285 4875 2612 123 25 5 chr20 41107589 41108029 -25559976 - L1MA4A LINE L1 -4 7001 6553 7686 150 51 36 chr20 41108029 41108214 -25559791 - L1MA4A LINE L1 -743 6105 5924 1975 132 31 7 chr20 41108214 41108502 -25559503 - AluJb SINE Alu -13 299 5 7686 150 51 36 chr20 41108502 41109953 -25558052 - L1MA4A LINE L1 -924 5924 4519 372 158 0 0 chr20 41109958 41110015 -25557990 - AluSp/q SINE Alu -14 289 233 1915 126 15 0 chr20 41110015 41110276 -25557729 - AluSx SINE Alu -47 265 1 12913 191 69 16 chr20 41110276 41112973 -25555032 - L1MA4A LINE L1 -4000 2849 12 6141 226 80 44 chr20 41112989 41113290 -25554715 - L1MB4 LINE L1 -1511 4871 4582 469 151 179 19 chr20 41113290 41113396 -25554609 - FLAM_A SINE Alu -10 123 1 6141 226 80 44 chr20 41113396 41113513 -25554492 - L1MB4 LINE L1 -1800 4582 4471 2104 110 24 7 chr20 41113513 41113805 -25554200 - AluSc SINE Alu -12 297 1 6141 226 80 44 chr20 41113805 41114933 -25553072 - L1MB4 LINE L1 -1911 4471 3385 1620 188 14 10 chr20 41114933 41115221 -25552784 - AluJo SINE Alu -23 289 1 2333 105 0 0 chr20 41115225 41115520 -25552485 - AluSq SINE Alu -17 296 2 6141 226 80 44 chr20 41115520 41116082 -25551923 - L1MB4 LINE L1 -2999 3383 2680 707 85 34 25 chr20 41116084 41116403 -25551602 + (TA)n Simple_repeat Simple_repeat 1 322 0 312 167 54 0 chr20 41116993 41117238 -25550767 + (TA)n Simple_repeat Simple_repeat 1 258 0 924 203 51 12 chr20 41117262 41117613 -25550392 - L1MB4 LINE L1 -3791 2591 2230 5024 215 99 55 chr20 41117647 41117805 -25550200 - L1MB4 LINE L1 -4331 2053 1903 2273 81 24 7 chr20 41117805 41118101 -25549904 - AluSg SINE Alu -9 301 1 5024 215 99 55 chr20 41118101 41119508 -25548497 - L1MB4 LINE L1 -4481 1903 296 2208 125 7 0 chr20 41119508 41119804 -25548201 - AluSx SINE Alu -14 298 1 5024 215 99 55 chr20 41119804 41120084 -25547921 - L1MB4 LINE L1 -6088 296 30 11175 84 4 8 chr20 41125619 41127135 -25540870 + L1PA6 LINE L1 656 2165 -3981 22362 45 8 3 chr20 41127135 41130656 -25537349 + L1PA6 LINE L1 2624 6150 -4 33 56 0 0 chr20 41131282 41131336 -25536669 + AT_rich Low_complexity Low_complexity 1 54 0 338 295 137 42 chr20 41131411 41131696 -25536309 - L1ME4a LINE L1 -234 5887 5576 4570 139 60 21 chr20 41131778 41132321 -25535684 + L1MB7 LINE L1 5063 5583 -601 2223 102 3 0 chr20 41132321 41132648 -25535357 + AluSp SINE Alu 1 328 0 4570 139 60 21 chr20 41132648 41133110 -25534895 + L1MB7 LINE L1 5583 6109 -75 284 185 0 19 chr20 41133561 41133615 -25534390 - MARNA DNA Mariner -240 346 294 1501 194 65 7 chr20 41133616 41133895 -25534110 + AluJo SINE Alu 1 295 -17 618 330 18 9 chr20 41134036 41134263 -25533742 - MIR SINE MIR -21 241 13 2059 118 9 22 chr20 41134779 41135094 -25532911 + AluSx SINE Alu 1 311 -1 2247 57 9 57 chr20 41135458 41135774 -25532231 + AluY SINE Alu 1 301 -10 490 284 104 38 chr20 41136138 41136814 -25531191 - L1ME4a LINE L1 -69 6052 5313 684 195 57 74 chr20 41136928 41137226 -25530779 + L1MC5 LINE L1 7637 7929 -32 22 0 0 0 chr20 41137277 41137299 -25530706 + AT_rich Low_complexity Low_complexity 1 22 0 207 265 145 43 chr20 41137560 41137677 -25530328 - MIR SINE MIR -61 147 19 793 164 0 34 chr20 41137822 41137968 -25530037 + FRAM SINE Alu 23 163 -13 1644 174 11 7 chr20 41137968 41138278 -25529727 + AluJo SINE Alu 1 311 0 2525 66 0 0 chr20 41138729 41139034 -25528971 - AluY SINE Alu -6 305 1 346 326 14 14 chr20 41139152 41139296 -25528709 - L3 LINE CR1 0 1577 1434 190 107 0 0 chr20 41139412 41139440 -25528565 - MIR SINE MIR -18 244 217 914 252 181 9 chr20 41139500 41139556 -25528449 + MLT1I LTR MaLR 1 409 0 962 246 181 7 chr20 41139556 41139849 -25528156 + MLT1I LTR MaLR 66 409 0 458 335 9 57 chr20 41139970 41140197 -25527808 - L2 LINE L2 -182 3090 2875 608 184 46 81 chr20 41140216 41140390 -25527615 + MER69A DNA AcHobo 5 172 -5 305 39 20 20 chr20 41140467 41140518 -25527487 + (TTTTG)n Simple_repeat Simple_repeat 1 75 0 1860 146 22 0 chr20 41140518 41140793 -25527212 - AluJb SINE Alu -1 331 1 536 283 54 22 chr20 41140838 41141022 -25526983 - L3 LINE CR1 -334 1243 1054 1890 257 49 32 chr20 41141253 41142148 -25525857 - L2 LINE L2 -4 3309 2400 222 118 0 0 chr20 41142712 41142746 -25525259 + (A)n Simple_repeat Simple_repeat 1 34 0 1536 276 45 39 chr20 41142851 41143459 -25524546 + L1MC4a LINE L1 5370 6001 -177 287 339 274 25 chr20 41143933 41144331 -25523674 - L3 LINE CR1 -48 1529 1033 398 245 75 108 chr20 41144604 41144882 -25523123 + L2 LINE L2 3042 3310 -3 469 284 40 31 chr20 41144920 41145118 -25522887 + MIR SINE MIR 64 259 -3 2141 179 14 85 chr20 41145249 41145294 -25522711 - L1MB2 LINE L1 -7 6164 6117 2322 104 0 0 chr20 41145294 41145591 -25522414 - AluSq SINE Alu -14 299 3 2141 179 14 85 chr20 41145591 41145921 -25522084 - L1MB2 LINE L1 -54 6117 5840 1766 107 162 0 chr20 41145921 41146174 -25521831 + AluY SINE Alu 1 294 -7 2141 179 14 85 chr20 41146174 41146360 -25521645 - L1MB2 LINE L1 -331 5840 5642 2230 149 34 8 chr20 41148203 41148559 -25519446 - MLT1A1 LTR MaLR 0 365 1 5039 167 22 19 chr20 41148697 41149925 -25518080 - L1MB3 LINE L1 -7 6176 4789 604 140 153 6 chr20 41149925 41150082 -25517923 + Charlie5 DNA MER1_type 2445 2624 0 1518 168 55 26 chr20 41150263 41150508 -25517497 + MER33 DNA MER1_type 1 258 -2327 3383 117 25 14 chr20 41150508 41151023 -25516982 - L1MC1 LINE L1 0 6333 5813 1518 168 55 26 chr20 41151023 41151086 -25516919 + MER33 DNA MER1_type 258 318 -6 486 338 153 29 chr20 41151173 41151513 -25516492 + L2 LINE L2 2891 3272 0 906 244 36 9 chr20 41151881 41152102 -25515903 + L3b LINE CR1 1129 1355 -228 2412 41 21 0 chr20 41152399 41152690 -25515315 - AluY SINE Alu -14 297 1 15250 31 11 0 chr20 41155086 41157573 -25510432 + L1PA4 LINE L1 3649 6152 -3 228 308 128 38 chr20 41157735 41157868 -25510137 + L2 LINE L2 3109 3253 -19 248 266 25 13 chr20 41158182 41158261 -25509744 + GA-rich Low_complexity Low_complexity 3 82 0 391 256 116 118 chr20 41158659 41158798 -25509207 - MLT1K LTR MaLR -24 564 426 2508 54 0 22 chr20 41158798 41159114 -25508891 - AluY SINE Alu -2 309 1 391 256 116 118 chr20 41159114 41159467 -25508538 - MLT1K LTR MaLR -162 426 100 1478 111 0 19 chr20 41159808 41160024 -25507981 - AluSg/x SINE Alu -18 294 83 6655 108 175 10 chr20 41160206 41161685 -25506320 - L1MA3 LINE L1 -3 6302 4521 629 235 93 39 chr20 41161974 41162178 -25505827 - MIR SINE MIR -34 228 14 201 293 229 29 chr20 41163237 41163377 -25504628 - MIR SINE MIR -18 244 77 23 0 0 0 chr20 41163475 41163498 -25504507 + AT_rich Low_complexity Low_complexity 1 23 0 1139 207 18 9 chr20 41163804 41164021 -25503984 - MER20 DNA MER1_type 0 219 1 745 196 0 38 chr20 41164195 41164328 -25503677 + FLAM_C SINE Alu 2 129 -14 197 204 56 0 chr20 41164831 41164885 -25503120 - L2 LINE L2 -1905 1409 1353 236 313 27 80 chr20 41164907 41165057 -25502948 - MIR SINE MIR -10 252 111 2172 119 0 0 chr20 41166396 41166718 -25501287 + AluSx SINE Alu 1 322 0 1839 147 3 27 chr20 41166784 41167083 -25500922 + AluJb SINE Alu 1 292 -20 356 280 21 98 chr20 41167106 41167342 -25500663 + MIR SINE MIR 2 219 -43 257 364 60 38 chr20 41167728 41168035 -25499970 + L2 LINE L2 2721 3037 -276 1569 201 95 22 chr20 41169509 41169878 -25498127 + L1MDb LINE L1 150 545 -5998 1457 180 65 17 chr20 41169912 41170206 -25497799 + L1MDb LINE L1 793 1100 -5443 755 167 0 0 chr20 41170208 41170316 -25497689 + AluJb SINE Alu 2 109 -203 1403 211 80 20 chr20 41170318 41170669 -25497336 + L1MDb LINE L1 1453 1824 -4716 1014 105 8 0 chr20 41170670 41170803 -25497202 + AluSq/x SINE Alu 1 134 -178 408 200 32 64 chr20 41170827 41170990 -25497015 + L1MDb LINE L1 1811 2111 -4429 640 198 0 18 chr20 41170990 41171101 -25496904 + FLAM_A SINE Alu 21 129 -13 1497 195 102 10 chr20 41171107 41171513 -25496492 + L1MDb LINE L1 2233 2673 -3867 21 0 0 0 chr20 41171638 41171659 -25496346 + AT_rich Low_complexity Low_complexity 1 21 0 482 186 82 77 chr20 41173306 41173500 -25494505 + L1ME2 LINE L1 5928 6122 -42 240 263 42 34 chr20 41173632 41173750 -25494255 + L1MC5 LINE L1 7806 7924 -37 884 126 0 0 chr20 41173808 41173927 -25494078 + FLAM_C SINE Alu 1 119 -24 653 219 70 43 chr20 41174083 41174270 -25493735 + MIR SINE MIR 71 262 0 718 245 55 70 chr20 41174320 41174577 -25493428 + MIR SINE MIR 2 254 -8 201 321 111 45 chr20 41174583 41174826 -25493179 - L2 LINE L2 -47 3266 3008 2427 66 0 0 chr20 41174967 41175255 -25492750 - AluY SINE Alu -22 289 2 481 313 9 0 chr20 41176032 41176147 -25491858 + L2 LINE L2 3155 3270 -2 1200 144 64 0 chr20 41176630 41176832 -25491173 - L1PB4 LINE L1 -33 6123 5909 2350 103 0 3 chr20 41177405 41177716 -25490289 - AluSg SINE Alu 0 310 1 2203 101 21 0 chr20 41177717 41178005 -25490000 - AluSq SINE Alu -19 294 1 2722 231 28 5 chr20 41178023 41178633 -25489372 - L1MC4a LINE L1 -3 7805 7182 224 236 194 14 chr20 41178936 41179008 -25488997 + MIR SINE MIR 34 118 -144 602 283 135 0 chr20 41179165 41179402 -25488603 + L1MC4a LINE L1 5612 5880 -1928 218 217 22 0 chr20 41179442 41179488 -25488517 + GA-rich Low_complexity Low_complexity 2 48 0 285 247 78 45 chr20 41179512 41179666 -25488339 + L1ME4a LINE L1 5946 6104 -17 288 219 172 23 chr20 41180004 41180132 -25487873 + L1M4 LINE L1 4078 4224 -1922 1040 208 24 5 chr20 41180535 41180747 -25487258 - MIR SINE MIR -46 216 1 23 0 0 0 chr20 41181045 41181068 -25486937 + AT_rich Low_complexity Low_complexity 1 23 0 627 340 95 44 chr20 41181514 41182200 -25485805 + L2 LINE L2 2137 2857 -457 192 77 0 0 chr20 41182344 41182370 -25485635 + (TC)n Simple_repeat Simple_repeat 2 27 0 244 298 77 29 chr20 41182442 41182546 -25485459 + L2 LINE L2 3164 3272 0 2179 106 0 13 chr20 41183201 41183504 -25484501 - AluSx SINE Alu -13 299 1 21 57 0 0 chr20 41183508 41183543 -25484462 + AT_rich Low_complexity Low_complexity 1 35 0 312 233 302 26 chr20 41183695 41183927 -25484078 + L1M4 LINE L1 3192 3487 -2659 939 106 8 0 chr20 41183932 41184064 -25483941 + AluSq/x SINE Alu 1 133 -180 1991 85 7 65 chr20 41184091 41184384 -25483621 + AluSp SINE Alu 27 302 -11 318 361 59 31 chr20 41184647 41185007 -25482998 + L1M4 LINE L1 3901 4276 -1870 2393 87 3 0 chr20 41185007 41185307 -25482698 - AluSp SINE Alu -12 301 1 318 361 59 31 chr20 41185307 41185367 -25482638 + L1M4 LINE L1 4276 4333 -1813 698 232 24 0 chr20 41185367 41185531 -25482474 + MER5B DNA MER1_type 4 171 -7 2523 63 0 0 chr20 41186349 41186650 -25481355 - AluY SINE Alu -10 301 1 2111 106 30 13 chr20 41186650 41186953 -25481052 - AluSx SINE Alu -4 308 1 988 272 104 53 chr20 41187243 41187695 -25480310 - L2 LINE L2 0 3313 2839 357 291 142 0 chr20 41189751 41189899 -25478106 - MIR SINE MIR -5 257 89 2129 81 53 0 chr20 41189915 41190199 -25477806 + AluSg SINE Alu 1 299 -11 2438 77 0 3 chr20 41190199 41190498 -25477507 + AluY SINE Alu 1 298 -13 541 158 10 30 chr20 41190737 41190827 -25477178 + AluJo SINE Alu 37 126 -186 2361 81 3 0 chr20 41190827 41191123 -25476882 - AluSc SINE Alu -12 297 1 4438 180 56 15 chr20 41192158 41192332 -25475673 - L1MB5 LINE L1 0 6174 6009 189 0 0 0 chr20 41192332 41192353 -25475652 + (TCC)n Simple_repeat Simple_repeat 1 21 0 4438 180 56 15 chr20 41192353 41193784 -25474221 - L1MB5 LINE L1 -165 6009 4502 2292 102 0 7 chr20 41194679 41194982 -25473023 + AluSq SINE Alu 1 301 -12 26 0 0 0 chr20 41195711 41195737 -25472268 + AT_rich Low_complexity Low_complexity 1 26 0 1141 219 107 43 chr20 41196635 41196989 -25471016 + L1ME2 LINE L1 5718 6099 -65 760 215 0 0 chr20 41196989 41197119 -25470886 + FLAM_A SINE Alu 2 131 -2 1141 219 107 43 chr20 41197119 41197138 -25470867 + L1ME2 LINE L1 6099 6115 -49 2624 50 0 0 chr20 41197395 41197696 -25470309 - AluY SINE Alu -10 301 1 1856 161 3 3 chr20 41197867 41198165 -25469840 + AluSx SINE Alu 1 298 -14 286 192 68 0 chr20 41198344 41198417 -25469588 - L1M LINE L1 -2386 5422 5345 2282 86 0 16 chr20 41198576 41198880 -25469125 - AluY SINE Alu -10 301 3 595 296 70 5 chr20 41198894 41199107 -25468898 - L1ME LINE L1 -422 5699 5473 22 35 0 0 chr20 41199432 41199461 -25468544 + AT_rich Low_complexity Low_complexity 1 29 0 594 226 26 45 chr20 41200056 41200211 -25467794 + MER5B DNA MER1_type 6 157 -21 1048 82 0 8 chr20 41200388 41200522 -25467483 - AluSq/x SINE Alu -180 133 1 502 298 88 59 chr20 41200622 41201216 -25466789 + HAL1 LINE L1 1156 1766 -741 995 307 136 11 chr20 41201467 41201930 -25466075 - L2 LINE L2 -400 2914 2394 2058 122 14 3 chr20 41202167 41202463 -25465542 - AluSg SINE Alu -11 299 1 1993 150 3 3 chr20 41202708 41203014 -25464991 - AluSx SINE Alu -6 306 1 2375 82 3 0 chr20 41203282 41203575 -25464430 + AluY SINE Alu 1 294 -17 376 273 141 21 chr20 41204050 41204292 -25463713 + L2 LINE L2 2140 2410 -904 225 275 74 137 chr20 41204579 41205026 -25462979 + L2 LINE L2 2810 3228 -85 439 331 58 0 chr20 41205192 41205346 -25462659 + MIR3 SINE MIR 36 198 -10 729 262 47 19 chr20 41205543 41205757 -25462248 + MIR SINE MIR 43 262 0 264 241 114 0 chr20 41206201 41206280 -25461725 - HAL1b LINE L1 -844 504 417 531 179 55 48 chr20 41206379 41206524 -25461481 + L2 LINE L2 2728 2873 -441 1671 166 83 12 chr20 41206550 41206888 -25461117 + THE1C LTR MaLR 14 375 0 703 278 46 60 chr20 41206890 41207174 -25460831 + L2 LINE L2 2884 3163 -150 1521 234 89 56 chr20 41207190 41207707 -25460298 + MLT1F LTR MaLR 1 534 -8 1729 179 27 3 chr20 41207829 41208125 -25459880 - AluJb SINE Alu -9 303 1 368 270 63 9 chr20 41208155 41208266 -25459739 + L2 LINE L2 3197 3313 0 1653 155 13 43 chr20 41208801 41209105 -25458900 - AluJo SINE Alu -16 296 2 329 310 26 17 chr20 41209549 41209665 -25458340 + L2 LINE L2 3188 3304 -9 278 257 147 9 chr20 41209775 41209884 -25458121 + MARNA DNA Mariner 445 568 -18 202 229 0 0 chr20 41209978 41210013 -25457992 - L2 LINE L2 -21 3292 3258 2104 148 3 0 chr20 41210072 41210382 -25457623 - 7SLRNA srpRNA srpRNA -8 312 2 455 238 41 48 chr20 41210391 41210538 -25457467 - MIR SINE MIR -71 191 46 395 247 0 0 chr20 41210881 41210954 -25457051 - MIR SINE MIR -149 113 41 230 253 138 11 chr20 41211410 41211497 -25456508 + L1MC4 LINE L1 6606 6703 -1339 351 214 51 34 chr20 41211568 41211685 -25456320 + L1MC5 LINE L1 7575 7693 -268 858 164 0 8 chr20 41211702 41211836 -25456169 + FLAM_A SINE Alu 1 133 0 217 241 17 17 chr20 41212659 41212717 -25455288 + L3 LINE CR1 685 742 -835 384 266 158 32 chr20 41212969 41213127 -25454878 + MER5A DNA MER1_type 9 186 -3 * 428 318 91 7 chr20 41213127 41213274 -25454731 + L3 LINE CR1 561 720 -857 180 316 0 0 chr20 41213275 41213332 -25454673 + L3 LINE CR1 849 905 -672 429 318 51 35 chr20 41213357 41213612 -25454393 + L3 LINE CR1 1014 1272 -305 454 289 16 16 chr20 41213621 41213749 -25454256 - L2 LINE L2 -5 3308 3181 2097 125 0 3 chr20 41214181 41214468 -25453537 - AluSx SINE Alu -26 286 1 1669 161 46 18 chr20 41214526 41214806 -25453199 - AluSx SINE Alu -24 288 1 25 0 0 0 chr20 41215100 41215125 -25452880 + AT_rich Low_complexity Low_complexity 1 25 0 2270 43 60 7 chr20 41215390 41215671 -25452334 + AluY SINE Alu 1 296 -15 333 0 0 0 chr20 41216038 41216075 -25451930 + (A)n Simple_repeat Simple_repeat 1 37 0 200 264 42 42 chr20 41216238 41216310 -25451695 + MIR SINE MIR 112 183 -79 985 263 93 57 chr20 41216436 41216911 -25451094 + LTR33 LTR ERVL 28 519 -2 24 0 0 0 chr20 41217881 41217905 -25450100 + AT_rich Low_complexity Low_complexity 1 24 0 356 322 44 44 chr20 41218035 41218215 -25449790 + MIR SINE MIR 82 261 -1 200 233 44 56 chr20 41218573 41218663 -25449342 + L3 LINE CR1 1189 1277 -300 2165 118 0 32 chr20 41219385 41219699 -25448306 + AluSx SINE Alu 1 304 -8 207 277 100 58 chr20 41220424 41220684 -25447321 - L2 LINE L2 -190 3082 2812 183 214 24 24 chr20 41220967 41221009 -25446996 + L2 LINE L2 2235 2276 -1038 682 332 47 16 chr20 41221009 41221373 -25446632 + L2 LINE L2 2592 2966 -348 2830 16 0 0 chr20 41221578 41221888 -25446117 + AluYa5 SINE Alu 1 310 -1 285 287 102 24 chr20 41222004 41222133 -25445872 + MIR SINE MIR 23 141 -67 504 213 47 40 chr20 41222467 41222722 -25445283 + MLT1J1 LTR MaLR 154 446 0 359 291 51 8 chr20 41222888 41223005 -25445000 - MIR SINE MIR -105 157 36 702 323 86 59 chr20 41223216 41224259 -25443746 + L2 LINE L2 1283 2353 -961 248 146 0 0 chr20 41224328 41224369 -25443636 - MLT2C1 LTR ERVL 0 397 357 619 157 37 0 chr20 41224434 41224542 -25443463 - MLT2C2 LTR ERVL -54 410 299 274 274 170 0 chr20 41224543 41224649 -25443356 + L2 LINE L2 3142 3265 -7 1582 143 108 0 chr20 41225043 41225302 -25442703 + AluJo SINE Alu 1 287 -25 2507 55 0 0 chr20 41225308 41225623 -25442382 + AluY SINE Alu 1 315 0 196 352 0 0 chr20 41226207 41226261 -25441744 - MIR SINE MIR -110 98 45 375 248 111 43 chr20 41226319 41226436 -25441569 + L2 LINE L2 3147 3271 -1 226 255 0 0 chr20 41229089 41229136 -25438869 - MIR SINE MIR -204 58 12 329 290 26 71 chr20 41229145 41229300 -25438705 - MER5A DNA MER1_type -6 183 36 264 267 74 52 chr20 41229182 41229317 -25438688 + MER5A DNA MER1_type 50 187 -2 * 491 298 218 37 chr20 41229425 41230204 -25437801 + L2 LINE L2 488 1407 -1907 2554 65 0 3 chr20 41230607 41230913 -25437092 - AluSc SINE Alu -4 305 1 439 258 97 7 chr20 41231081 41231236 -25436769 - MIR SINE MIR -54 208 40 406 325 43 55 chr20 41231424 41231679 -25436326 + MIR SINE MIR 9 260 -2 274 294 78 39 chr20 41231710 41231863 -25436142 - L2 LINE L2 -29 3284 3126 230 173 0 58 chr20 41231864 41231916 -25436089 + LTR30 LTR ERV1 4 52 -670 1290 146 29 54 chr20 41231916 41232155 -25435850 + LTR12 LTR ERV1 53 285 -429 290 258 11 0 chr20 41232156 41232245 -25435760 + LTR30 LTR ERV1 553 642 -80 654 167 0 9 chr20 41232247 41232355 -25435650 + LTR12 LTR ERV1 481 587 -127 750 291 171 47 chr20 41232390 41233237 -25434768 - L2 LINE L2 -207 3106 2151 2595 53 3 0 chr20 41233399 41233701 -25434304 - AluY SINE Alu -8 303 1 23 33 0 0 chr20 41234107 41234137 -25433868 + AT_rich Low_complexity Low_complexity 1 30 0 1086 237 167 24 chr20 41234657 41235000 -25433005 - L2 LINE L2 -1 3312 3019 1984 88 0 42 chr20 41235000 41235284 -25432721 - AluSg SINE Alu -24 286 15 1086 237 167 24 chr20 41235284 41235465 -25432540 - L2 LINE L2 -294 3019 2691 404 226 128 47 chr20 41235508 41235742 -25432263 + L1ME4a LINE L1 5858 6110 -11 217 132 0 0 chr20 41235819 41235857 -25432148 + (CAAAAA)n Simple_repeat Simple_repeat 2 39 0 307 283 67 75 chr20 41237110 41237350 -25430655 - L1M2 LINE L1 -6085 764 527 35 71 0 0 chr20 41237378 41237448 -25430557 + GC_rich Low_complexity Low_complexity 1 70 0 309 244 0 0 chr20 41237493 41237579 -25430426 + (CTCGG)n Simple_repeat Simple_repeat 1 86 0 244 329 65 32 chr20 41238282 41238498 -25429507 + MIR SINE MIR 15 237 -25 1027 204 260 9 chr20 41238626 41238949 -25429056 + L2 LINE L2 2377 2780 -534 973 174 0 0 chr20 41238982 41239143 -25428862 - AluJb SINE Alu -29 283 123 867 268 156 29 chr20 41239163 41239604 -25428401 + L2 LINE L2 2788 3311 -2 261 276 175 110 chr20 41239637 41239772 -25428233 - L2 LINE L2 -1 3271 3146 2230 113 3 0 chr20 41239772 41240074 -25427931 + AluSq SINE Alu 1 303 -10 261 276 175 110 chr20 41240074 41240246 -25427759 - L2 LINE L2 -126 3146 2944 2278 118 0 0 chr20 41241120 41241425 -25426580 - AluSx SINE Alu -7 305 1 464 189 0 22 chr20 41241492 41241582 -25426423 + MLT1I LTR MaLR 53 140 -269 2821 133 13 16 chr20 41241583 41242022 -25425983 - Tigger3b DNA MER2_type -1797 1231 792 1909 153 0 3 chr20 41242022 41242316 -25425689 - AluSx SINE Alu -19 293 1 2821 133 13 16 chr20 41242316 41242354 -25425651 - Tigger3b DNA MER2_type -2236 792 755 1724 188 3 10 chr20 41242354 41242668 -25425337 + AluJo SINE Alu 1 312 0 2821 133 13 16 chr20 41242668 41242780 -25425225 - Tigger3b DNA MER2_type -2273 755 665 809 168 15 0 chr20 41242780 41242911 -25425094 - AluJb SINE Alu -16 296 164 3033 132 78 40 chr20 41242911 41242986 -25425019 - Tigger3b DNA MER2_type -2351 677 606 1928 131 0 0 chr20 41242986 41243260 -25424745 - AluSx SINE Alu 0 312 39 3033 132 78 40 chr20 41243260 41243811 -25424194 - Tigger3b DNA MER2_type -2422 606 27 2619 153 23 35 chr20 41243889 41244351 -25423654 + L1MB2 LINE L1 5662 6119 -52 2201 117 0 0 chr20 41244351 41244650 -25423355 + AluSx SINE Alu 1 299 -13 2619 153 23 35 chr20 41244650 41244703 -25423302 + L1MB2 LINE L1 6119 6171 0 280 234 19 102 chr20 41244707 41244720 -25423285 + L1ME3A LINE L1 2100 2112 -4284 2116 96 20 3 chr20 41244720 41245012 -25422993 + AluSc SINE Alu 1 297 -12 280 234 19 102 chr20 41245012 41245254 -25422751 + L1ME3A LINE L1 2112 2334 -4062 423 167 0 0 chr20 41245259 41245325 -25422680 + AluJ/FLAM SINE Alu 1 66 -246 229 229 0 0 chr20 41245360 41245408 -25422597 + L2 LINE L2 3266 3313 0 1445 259 91 28 chr20 41245474 41245569 -25422436 + L1ME3A LINE L1 5065 5153 -1086 2319 65 13 7 chr20 41245569 41245875 -25422130 + AluY SINE Alu 1 308 -3 1445 259 91 28 chr20 41245875 41246091 -25421914 + L1ME3A LINE L1 5153 5354 -885 291 28 0 0 chr20 41246091 41246127 -25421878 + (CA)n Simple_repeat Simple_repeat 1 36 0 1445 259 91 28 chr20 41246127 41246329 -25421676 + L1ME3A LINE L1 5354 5542 -697 2022 120 3 3 chr20 41246329 41246621 -25421384 - AluSc SINE Alu -15 294 3 1445 259 91 28 chr20 41246621 41246975 -25421030 + L1ME3A LINE L1 5542 6020 -219 1703 124 75 11 chr20 41247269 41247551 -25420454 - AluJb SINE Alu -12 300 1 430 181 83 62 chr20 41247921 41248013 -25419992 + L1MA10 LINE L1 6187 6285 -49 2510 39 0 7 chr20 41248013 41248320 -25419685 - AluY SINE Alu -6 305 1 430 181 83 62 chr20 41248320 41248371 -25419634 + L1MA10 LINE L1 6285 6333 -1 1796 174 0 19 chr20 41248398 41248715 -25419290 - AluJo SINE Alu -1 311 1 505 371 118 40 chr20 41248739 41249062 -25418943 - L1ME3 LINE L1 -319 5855 5508 542 275 172 51 chr20 41249955 41250001 -25418004 - L2 LINE L2 -3 3310 3271 1823 139 42 0 chr20 41250001 41250288 -25417717 - AluSx SINE Alu -13 299 1 542 275 172 51 chr20 41250288 41250572 -25417433 - L2 LINE L2 -42 3271 2940 893 226 12 0 chr20 41250579 41250743 -25417262 - FRAM SINE Alu 0 166 1 1745 162 55 0 chr20 41251589 41251879 -25416126 - AluSx SINE Alu -6 306 1 2191 74 0 14 chr20 41252260 41252571 -25415434 + AluY SINE Alu 2 308 0 1966 128 16 16 chr20 41253102 41253407 -25414598 + AluSx SINE Alu 1 305 -7 1824 154 0 33 chr20 41253541 41253846 -25414159 - AluJo SINE Alu -17 295 1 1038 151 22 0 chr20 41253846 41254025 -25413980 - MLT1E LTR MaLR -409 184 2 180 371 0 11 chr20 41254025 41254114 -25413891 - L2 LINE L2 -234 3038 2951 1107 116 35 81 chr20 41255664 41255862 -25412143 - MER5A DNA MER1_type 0 189 1 2283 92 0 25 chr20 41255866 41256180 -25411825 + AluSx SINE Alu 1 306 -6 1882 87 0 4 chr20 41256188 41256430 -25411575 + AluSq SINE Alu 1 241 -72 398 301 96 0 chr20 41256439 41256575 -25411430 + MIR SINE MIR 110 258 -4 905 167 10 56 chr20 41256845 41257043 -25410962 - MER53 DNA DNA 0 189 1 1630 151 0 45 chr20 41257331 41257452 -25410553 + AluJo SINE Alu 28 153 -159 2202 118 0 0 chr20 41257452 41257758 -25410247 + AluSg1 SINE Alu 1 306 -3 1630 151 0 45 chr20 41257758 41257928 -25410077 + AluJo SINE Alu 153 306 -6 1993 110 0 64 chr20 41258300 41258511 -25409494 - AluSx SINE Alu -3 309 125 2298 98 0 0 chr20 41258511 41258816 -25409189 + AluY SINE Alu 1 305 -6 1993 110 0 64 chr20 41258816 41258930 -25409075 - AluSx SINE Alu -187 125 5 25 0 0 0 chr20 41259034 41259059 -25408946 + AT_rich Low_complexity Low_complexity 1 25 0 181 250 21 21 chr20 41259059 41259107 -25408898 - L2 LINE L2 -8 3264 3217 333 236 402 8 chr20 41259124 41259251 -25408754 + MER5B DNA MER1_type 1 177 -1 270 204 82 61 chr20 41259254 41259352 -25408653 - MIR SINE MIR -66 196 97 258 314 190 50 chr20 41260053 41260295 -25407710 - L2 LINE L2 -19 3294 3019 285 350 92 18 chr20 41260310 41260473 -25407532 - MIR SINE MIR -68 194 20 281 222 49 49 chr20 41261059 41261140 -25406865 + MIR SINE MIR 61 141 -67 2189 94 17 0 chr20 41261507 41261805 -25406200 + AluY SINE Alu 2 304 -7 498 239 34 0 chr20 41261976 41262093 -25405912 - MIR SINE MIR -107 155 35 1213 147 18 41 chr20 41262780 41262998 -25405007 + MER20 DNA MER1_type 3 215 -4 491 185 66 60 chr20 41263547 41263583 -25404422 - MER5A DNA MER1_type -29 160 126 2031 153 0 6 chr20 41263583 41263897 -25404108 + AluJb SINE Alu 1 312 0 491 185 66 60 chr20 41263897 41264011 -25403994 - MER5A DNA MER1_type -63 126 9 581 273 6 42 chr20 41265093 41265258 -25402747 + MIR SINE MIR 34 192 -70 294 353 45 6 chr20 41265285 41265441 -25402564 - MIR3 SINE MIR -2 206 45 322 297 84 50 chr20 41266037 41266239 -25401766 + MIR SINE MIR 48 256 -6 2205 94 0 0 chr20 41266264 41266584 -25401421 + AluSq SINE Alu 1 320 0 553 312 73 18 chr20 41266722 41266940 -25401065 + MIR SINE MIR 1 230 -32 340 321 166 14 chr20 41266964 41267325 -25400680 - L2 LINE L2 -43 3270 2855 275 219 0 152 chr20 41267622 41267773 -25400232 - L2 LINE L2 -177 3095 2968 198 329 178 30 chr20 41267927 41268158 -25399847 - L2 LINE L2 -15 3257 2993 300 325 32 16 chr20 41268689 41268812 -25399193 + MIR SINE MIR 10 134 -128 358 202 58 10 chr20 41269023 41269127 -25398878 - L1ME LINE L1 -728 5436 5328 903 142 30 24 chr20 41269133 41269302 -25398703 - L1MB4 LINE L1 0 6180 6011 272 68 0 23 chr20 41269332 41269376 -25398629 + (TTCC)n Simple_repeat Simple_repeat 2 44 0 567 339 170 5 chr20 41270271 41270660 -25397345 - L2 LINE L2 -9 3263 2811 319 195 11 11 chr20 41270713 41270775 -25397230 - MER3 DNA MER1_type 0 209 145 1591 120 18 72 chr20 41270775 41271051 -25396954 + AluJo SINE Alu 7 267 -45 319 195 11 11 chr20 41271051 41271068 -25396937 - MER3 DNA MER1_type -63 146 130 698 192 6 62 chr20 41271068 41271106 -25396899 - MER3 DNA MER1_type 5 167 128 2324 82 0 3 chr20 41271106 41271400 -25396605 - AluSc SINE Alu -16 293 1 698 192 6 62 chr20 41271400 41271538 -25396467 - MER3 DNA MER1_type -34 128 1 317 206 113 31 chr20 41273097 41273194 -25394811 - L2 LINE L2 -1 3312 3208 2184 100 7 0 chr20 41274809 41275110 -25392895 - AluSx SINE Alu -1 311 9 298 248 129 0 chr20 41275147 41275248 -25392757 - MIR SINE MIR -62 146 33 454 313 137 4 chr20 41275986 41276219 -25391786 - L3 LINE CR1 -110 1467 1204 2345 99 0 6 chr20 41278927 41279241 -25388764 - AluSx SINE Alu 0 312 1 2330 85 0 3 chr20 41282940 41283246 -25384759 - AluY SINE Alu -6 305 1 22 0 0 0 chr20 41286247 41286269 -25381736 + GC_rich Low_complexity Low_complexity 1 22 0 33 97 0 0 chr20 41286441 41286544 -25381461 + GC_rich Low_complexity Low_complexity 1 103 0 678 339 140 15 chr20 41287346 41287688 -25380317 - L3 LINE CR1 -649 928 544 1622 196 78 69 chr20 41287871 41288170 -25379835 - MLT1C LTR MaLR 0 467 172 2331 62 0 37 chr20 41288170 41288491 -25379514 - AluY SINE Alu -2 309 1 1345 191 85 14 chr20 41288491 41288521 -25379484 - AluJb SINE Alu -10 302 276 2320 100 0 0 chr20 41288521 41288831 -25379174 + AluSq SINE Alu 1 310 -3 1345 191 85 14 chr20 41288831 41289082 -25378923 - AluJb SINE Alu -36 276 1 1622 196 78 69 chr20 41289082 41289244 -25378761 - MLT1C LTR MaLR -294 173 1 389 92 62 0 chr20 41289455 41289520 -25378485 - U3 snRNA snRNA -148 69 1 191 391 0 0 chr20 41289604 41289668 -25378337 - L3 LINE CR1 -1113 464 401 733 188 0 0 chr20 41290334 41290451 -25377554 - FLAM_C SINE Alu -13 130 14 2030 91 48 45 chr20 41290481 41290790 -25377215 - AluSg SINE Alu 0 310 1 2210 110 0 0 chr20 41291564 41291863 -25376142 - AluSx SINE Alu -13 299 1 429 312 8 8 chr20 41291929 41292054 -25375951 + MIR SINE MIR 20 144 -64 746 207 217 45 chr20 41292352 41292495 -25375510 + LTR16A1 LTR ERVL 8 125 -332 2450 126 34 14 chr20 41292495 41292852 -25375153 + THE1B LTR MaLR 1 364 0 746 207 217 45 chr20 41292852 41293090 -25374915 + LTR16A1 LTR ERVL 125 455 -2 202 357 10 0 chr20 41293251 41293349 -25374656 - L2 LINE L2 -298 2974 2876 181 119 48 0 chr20 41295235 41295277 -25372728 + CT-rich Low_complexity Low_complexity 5 48 0 2247 125 0 0 chr20 41296416 41296720 -25371285 + AluSx SINE Alu 1 304 -8 188 209 0 15 chr20 41296845 41296912 -25371093 + GA-rich Low_complexity Low_complexity 1 66 0 2130 133 0 10 chr20 41297674 41297983 -25370022 + AluSx SINE Alu 1 306 -6 2357 105 3 0 chr20 41298418 41298723 -25369282 + AluSx SINE Alu 1 306 -6 732 112 0 0 chr20 41298950 41299048 -25368957 + AluSq/x SINE Alu 21 118 -194 276 88 53 0 chr20 41299048 41299105 -25368900 + (TA)n Simple_repeat Simple_repeat 1 60 0 439 257 99 45 chr20 41299742 41300034 -25367971 - HAL1 LINE L1 -969 1538 1231 1905 91 20 0 chr20 41300210 41300462 -25367543 - AluSg SINE Alu -15 295 39 2403 64 14 0 chr20 41301324 41301640 -25366365 + AluSp SINE Alu 1 320 0 2481 73 0 0 chr20 41301750 41302053 -25365952 - AluY SINE Alu -8 303 1 1667 158 83 75 chr20 41302978 41303130 -25364875 + THE1B LTR MaLR 1 150 -214 2193 126 3 0 chr20 41303130 41303423 -25364582 - AluSg SINE Alu -16 294 1 1667 158 83 75 chr20 41303423 41303631 -25364374 + THE1B LTR MaLR 150 364 0 479 244 171 12 chr20 41303643 41303807 -25364198 - MIR SINE MIR -65 197 8 1072 202 20 61 chr20 41304105 41304292 -25363713 + L1ME2 LINE L1 5764 5932 -232 2593 137 5 0 chr20 41304292 41304680 -25363325 - MLT1B LTR MaLR 0 390 1 1072 202 20 61 chr20 41304680 41304834 -25363171 + L1ME2 LINE L1 5932 6091 -73 2391 92 0 0 chr20 41304837 41305131 -25362874 + AluSc SINE Alu 3 296 -13 2114 113 0 7 chr20 41305421 41305756 -25362249 - AluSx SINE Alu 0 333 1 1975 169 0 3 chr20 41305777 41306090 -25361915 - AluJo SINE Alu 0 312 1 210 139 83 0 chr20 41306512 41306548 -25361457 + L2 LINE L2 3271 3309 -4 207 280 149 28 chr20 41307162 41307269 -25360736 + MIR SINE MIR 77 196 -66 581 307 47 9 chr20 41307428 41307643 -25360362 - L3 LINE CR1 -137 1440 1218 237 167 19 19 chr20 41307750 41307804 -25360201 + LTR49 LTR ERV1 468 521 -74 1833 143 25 0 chr20 41307821 41308101 -25359904 + AluJb SINE Alu 14 300 -12 2326 97 3 0 chr20 41308609 41308918 -25359087 - AluY SINE Alu -1 310 1 342 253 126 21 chr20 41308935 41309030 -25358975 - L1MC4 LINE L1 -1323 6719 6615 724 115 0 0 chr20 41309030 41309134 -25358871 - AluSg/x SINE Alu -4 308 205 233 274 137 11 chr20 41309432 41309622 -25358383 + L1P LINE L1 4858 5071 -1075 331 296 114 110 chr20 41309981 41310437 -25357568 + L2 LINE L2 2815 3272 0 1892 178 3 0 chr20 41310500 41310792 -25357213 - AluJo SINE Alu -13 299 7 2563 34 0 14 chr20 41311038 41311378 -25356627 - AluY SINE Alu 0 336 1 626 156 41 9 chr20 41311390 41311523 -25356482 - THE1B LTR MaLR -51 313 179 442 184 136 19 chr20 41311778 41311881 -25356124 + L2 LINE L2 3194 3308 -5 1323 186 50 39 chr20 41312292 41312591 -25355414 + AluJo SINE Alu 1 302 0 240 339 61 9 chr20 41312619 41312734 -25355271 - MIR SINE MIR -135 127 7 261 0 0 0 chr20 41313179 41313208 -25354797 + (TG)n Simple_repeat Simple_repeat 1 29 0 221 291 25 0 chr20 41313310 41313389 -25354616 + (TG)n Simple_repeat Simple_repeat 2 82 0 2298 112 0 0 chr20 41314433 41314729 -25353276 - AluSx SINE Alu -16 296 1 204 135 0 0 chr20 41315625 41315662 -25352343 + (TCCC)n Simple_repeat Simple_repeat 3 39 0 929 90 0 38 chr20 41316345 41316478 -25351527 + FRAM SINE Alu 48 175 -1 231 36 0 0 chr20 41316686 41316714 -25351291 + (TA)n Simple_repeat Simple_repeat 2 29 0 2222 108 0 0 chr20 41316727 41317015 -25350990 - AluSx SINE Alu -24 288 1 1006 185 71 60 chr20 41317078 41317270 -25350735 - MER58B DNA MER1_type -2081 339 142 2482 63 0 0 chr20 41317270 41317557 -25350448 - AluY SINE Alu -9 302 16 1006 185 71 60 chr20 41317557 41317645 -25350360 - MER58B DNA MER1_type -2278 142 56 234 333 88 9 chr20 41317714 41317828 -25350177 + MIR SINE MIR 20 142 -120 608 231 118 32 chr20 41318398 41318584 -25349421 + MIR SINE MIR 48 249 -13 379 138 46 0 chr20 41318607 41318672 -25349333 - MER53 DNA DNA -1 188 121 1355 170 5 5 chr20 41318672 41318896 -25349109 + AluJo SINE Alu 1 224 -88 1789 158 21 14 chr20 41318896 41319187 -25348818 - AluJo SINE Alu -19 293 1 240 165 184 18 chr20 41319195 41319304 -25348701 + MER53 DNA DNA 41 167 -22 * 252 223 134 18 chr20 41319216 41319328 -25348677 - MER53 DNA DNA -60 129 5 2433 74 7 0 chr20 41319661 41319959 -25348046 + AluSp SINE Alu 5 304 -9 363 118 47 90 chr20 41319966 41320073 -25347932 - MIR SINE MIR -62 146 99 2471 84 0 0 chr20 41321373 41321672 -25346333 - AluSx SINE Alu -13 299 1 276 280 280 0 chr20 41325754 41325904 -25342101 + MIR SINE MIR 47 238 -24 328 327 28 0 chr20 41327651 41327758 -25340247 - MIR SINE MIR -21 241 132 31 0 0 0 chr20 41327861 41327892 -25340113 + AT_rich Low_complexity Low_complexity 1 31 0 236 280 207 40 chr20 41327970 41328120 -25339885 - MIR3 SINE MIR -22 186 12 574 238 129 33 chr20 41329402 41329685 -25338320 + L1MC4 LINE L1 7518 7919 -123 220 212 30 15 chr20 41329694 41329760 -25338245 + (TA)n Simple_repeat Simple_repeat 2 68 0 1361 185 73 16 chr20 41329971 41330285 -25337720 + MLT1A1 LTR MaLR 31 362 -3 304 321 164 50 chr20 41331494 41331756 -25336249 + L3b LINE CR1 1258 1549 -34 783 277 48 0 chr20 41334019 41334268 -25333737 + MIR SINE MIR 2 262 0 361 238 127 16 chr20 41334483 41334609 -25333396 - MIR SINE MIR -88 174 35 553 208 182 39 chr20 41335556 41335710 -25332295 - MER5A DNA MER1_type -1 188 13 529 245 166 7 chr20 41335730 41335881 -25332124 + MER5B DNA MER1_type 1 175 -3 205 133 0 0 chr20 41336295 41336325 -25331680 + L2 LINE L2 3242 3271 -1 234 275 33 22 chr20 41337942 41338033 -25329972 - L2 LINE L2 -43 3229 3138 425 254 45 100 chr20 41338192 41338412 -25329593 - L2 LINE L2 -410 2904 2697 2022 115 87 0 chr20 41339102 41339389 -25328616 + AluSx SINE Alu 1 312 0 209 171 0 0 chr20 41340812 41340847 -25327158 + CT-rich Low_complexity Low_complexity 2 36 0 1361 177 8 36 chr20 41342171 41342420 -25325585 + AluJo SINE Alu 12 253 -59 204 261 198 63 chr20 41342486 41342597 -25325408 - MIR SINE MIR -63 145 20 721 201 111 10 chr20 41343646 41343845 -25324160 - HAL1 LINE L1 -39 2468 2250 200 273 106 0 chr20 41343903 41343969 -25324036 - MIR3 SINE MIR -5 203 131 195 69 0 0 chr20 41345593 41345622 -25322383 + (A)n Simple_repeat Simple_repeat 1 29 0 655 218 231 0 chr20 41346820 41346976 -25321029 + MER58C DNA MER1_type 2 193 -22 874 297 0 0 chr20 41347170 41347399 -25320606 - MIR SINE MIR -28 234 6 274 329 0 0 chr20 41348051 41348133 -25319872 + L3 LINE CR1 862 943 -634 207 258 107 32 chr20 41348370 41348464 -25319541 + MIR SINE MIR 47 146 -62 185 264 0 0 chr20 41348628 41348681 -25319324 + MIR SINE MIR 119 171 -91 193 220 0 0 chr20 41349228 41349278 -25318727 + MIR3 SINE MIR 156 205 -3 * 440 322 99 27 chr20 41349273 41349605 -25318400 + L3 LINE CR1 1084 1439 -138 233 258 11 54 chr20 41350380 41350473 -25317532 + MIR SINE MIR 58 146 -62 2074 79 98 4 chr20 41350659 41350936 -25317069 - AluSg SINE Alu -7 303 1 6501 203 109 39 chr20 41351405 41351683 -25316322 + L1MD1 LINE L1 1 258 -6282 2413 92 0 3 chr20 41351683 41351987 -25316018 + AluSq SINE Alu 3 305 -8 6501 203 109 39 chr20 41351987 41354186 -25313819 + L1MD1 LINE L1 258 2882 -3658 2123 118 3 0 chr20 41354186 41354473 -25313532 - AluSx SINE Alu -23 289 2 6501 203 109 39 chr20 41354473 41355117 -25312888 + L1MD1 LINE L1 2882 3480 -3060 1061 229 38 35 chr20 41355104 41355118 -25312887 + L1MD1 LINE L1 4884 4896 -1644 * 1776 165 10 36 chr20 41355118 41355427 -25312578 + AluJo SINE Alu 1 301 -11 1061 229 38 35 chr20 41355427 41355784 -25312221 + L1MD1 LINE L1 4896 5256 -1284 623 96 0 0 chr20 41355791 41355874 -25312131 - AluJb SINE Alu -176 136 54 5547 156 27 14 chr20 41355874 41356913 -25311092 + L1MD1 LINE L1 5589 6636 0 1394 107 95 65 chr20 41357176 41357439 -25310566 + MER44D DNA MER2_type 22 562 -47 357 247 11 0 chr20 41357463 41357556 -25310449 + MER2 DNA MER2_type 2 94 -145 2268 99 0 0 chr20 41358116 41358408 -25309597 + AluSx SINE Alu 5 296 -16 2292 115 0 0 chr20 41358880 41359175 -25308830 + AluSg SINE Alu 1 295 -15 328 337 0 11 chr20 41360981 41361073 -25306932 + L2 LINE L2 3143 3233 -39 1812 142 3 50 chr20 41361964 41362266 -25305739 + AluJo SINE Alu 3 290 -22 336 325 97 8 chr20 41363202 41363439 -25304566 - L1M4 LINE L1 -3634 2512 2255 1023 207 30 0 chr20 41364067 41364270 -25303735 - MER3 DNA MER1_type 0 209 1 496 234 63 58 chr20 41364515 41364720 -25303285 - MIR SINE MIR -21 241 36 208 276 0 69 chr20 41365705 41365792 -25302213 + MER5B DNA MER1_type 1 81 -97 205 333 0 29 chr20 41368315 41368384 -25299621 - L2 LINE L2 -8 3305 3239 529 178 271 0 chr20 41368392 41368521 -25299484 + MSTD LTR MaLR 233 396 0 2427 87 0 3 chr20 41368708 41369007 -25298998 - AluSq SINE Alu -15 298 1 587 283 44 10 chr20 41369501 41369706 -25298299 - L1ME3A LINE L1 -9 6161 5950 181 229 82 0 chr20 41369858 41369919 -25298086 + L3 LINE CR1 1236 1301 -276 188 359 51 34 chr20 41370026 41370143 -25297862 + L3 LINE CR1 1426 1544 -33 189 328 16 16 chr20 41373541 41373605 -25294400 + L3b LINE CR1 1380 1443 -140 215 264 83 0 chr20 41374254 41374326 -25293679 - MIR SINE MIR -1 261 184 185 316 97 44 chr20 41376626 41376740 -25291265 - L2 LINE L2 0 3272 3153 21 0 0 0 chr20 41377596 41377617 -25290388 + AT_rich Low_complexity Low_complexity 1 21 0 617 191 158 102 chr20 41377837 41378285 -25289720 - L1MC5 LINE L1 -556 7405 6840 539 204 23 102 chr20 41378285 41378461 -25289544 + L1MC4 LINE L1 6530 6691 -1351 456 190 83 41 chr20 41378467 41378588 -25289417 - L1MC5 LINE L1 -1117 6844 6719 181 326 32 0 chr20 41378710 41378805 -25289200 - MIR SINE MIR -88 120 23 2529 92 29 3 chr20 41379259 41379605 -25288400 + THE1A LTR MaLR 1 355 0 11164 97 27 1 chr20 41379605 41381145 -25286860 + THE1A-int LTR MaLR 1 1579 -1 2577 96 8 3 chr20 41381146 41381499 -25286506 + THE1A LTR MaLR 1 355 0 375 259 39 80 chr20 41381828 41382151 -25285854 - L1MD3 LINE L1 -1101 6757 6397 5583 199 49 82 chr20 41382261 41383916 -25284089 + L1MC4 LINE L1 6388 7987 -55 5855 208 62 35 chr20 41384076 41385579 -25282426 + L1MC4a LINE L1 6248 7791 -17 2333 97 3 0 chr20 41385727 41386025 -25281980 + AluSg SINE Alu 1 299 -11 504 213 111 48 chr20 41386084 41386291 -25281714 - L1MD3 LINE L1 -1877 5931 5712 239 225 88 12 chr20 41386440 41386520 -25281485 - MARNA DNA Mariner -358 228 143 483 265 87 52 chr20 41386542 41386931 -25281074 + MLT1J LTR MaLR 5 446 -65 225 0 0 0 chr20 41387366 41387391 -25280614 + (A)n Simple_repeat Simple_repeat 1 25 0 539 165 43 35 chr20 41387392 41387507 -25280498 + FLAM_C SINE Alu 2 117 -26 379 312 119 47 chr20 41387770 41387910 -25280095 + L2 LINE L2 2944 3072 -241 2426 92 0 0 chr20 41387910 41388214 -25279791 - AluSq SINE Alu -9 304 1 379 312 119 47 chr20 41388214 41388416 -25279589 + L2 LINE L2 3072 3311 -2 1489 146 98 8 chr20 41388541 41388795 -25279210 + AluJb SINE Alu 5 281 -31 979 212 27 0 chr20 41390872 41391056 -25276949 - MER58A DNA MER1_type -2 222 34 2361 75 10 10 chr20 41391345 41391639 -25276366 - AluY SINE Alu -17 294 1 2043 123 0 26 chr20 41391756 41392066 -25275939 + AluSx SINE Alu 1 302 -10 1709 243 83 37 chr20 41392289 41392878 -25275127 - Charlie7 DNA MER1_type -1922 690 75 266 68 45 0 chr20 41393527 41393571 -25274434 + A-rich Low_complexity Low_complexity 1 46 0 496 213 28 118 chr20 41394939 41395150 -25272855 - MIR SINE MIR 0 262 71 209 125 25 0 chr20 41396299 41396339 -25271666 + A-rich Low_complexity Low_complexity 4 44 0 212 382 13 0 chr20 41396437 41396513 -25271492 + L2 LINE L2 3186 3262 -10 210 174 0 0 chr20 41396589 41396635 -25271370 + A-rich Low_complexity Low_complexity 1 46 0 201 237 0 0 chr20 41396648 41396707 -25271298 + (TA)n Simple_repeat Simple_repeat 1 59 0 1645 179 0 14 chr20 41396759 41397074 -25270931 + AluJo SINE Alu 1 311 0 635 256 155 32 chr20 41397339 41397687 -25270318 + HAL1 LINE L1 5 395 -2112 372 271 156 91 chr20 41397691 41398031 -25269974 + HAL1 LINE L1 458 819 -1688 1473 251 172 44 chr20 41398082 41399369 -25268636 + L1ME LINE L1 5 1429 -4651 * 2625 247 117 18 chr20 41399365 41400675 -25267330 + HAL1 LINE L1 872 2507 0 811 218 51 0 chr20 41400770 41400926 -25267079 + FRAM SINE Alu 1 163 -13 271 282 86 39 chr20 41401203 41401483 -25266522 + L1ME LINE L1 5319 5611 -510 30 45 0 0 chr20 41401620 41401664 -25266341 + AT_rich Low_complexity Low_complexity 1 44 0 348 285 70 41 chr20 41403902 41404087 -25263918 + MIR SINE MIR 1 195 -67 1497 135 129 3 chr20 41405453 41405756 -25262249 + L1MA8 LINE L1 5948 6288 -3 34 24 0 0 chr20 41405763 41405804 -25262201 + AT_rich Low_complexity Low_complexity 1 41 0 241 242 91 76 chr20 41406046 41406178 -25261827 - L2 LINE L2 -21 3292 3159 256 210 16 65 chr20 41407835 41407897 -25260108 - L2 LINE L2 0 3313 3255 2633 120 67 67 chr20 41410034 41410335 -25257670 - Tigger3(Golem) DNA MER2_type 0 3029 2729 2249 113 0 0 chr20 41410335 41410645 -25257360 + AluSx SINE Alu 1 310 -2 814 86 0 9 chr20 41410649 41410765 -25257240 + L1PA10 LINE L1 6052 6166 -2 2633 120 67 67 chr20 41410765 41410835 -25257170 - Tigger3(Golem) DNA MER2_type -303 2726 2657 188 67 33 0 chr20 41410835 41410865 -25257140 + (TGAG)n Simple_repeat Simple_repeat 1 31 0 2633 120 67 67 chr20 41410865 41411037 -25256968 - Tigger3(Golem) DNA MER2_type -371 2658 2480 240 100 0 0 chr20 41411104 41411144 -25256861 + (TA)n Simple_repeat Simple_repeat 2 41 0 183 42 0 0 chr20 41411146 41411170 -25256835 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 331 378 118 0 chr20 41411929 41412048 -25255957 + L2 LINE L2 3122 3254 -18 1945 128 34 14 chr20 41412443 41412740 -25255265 + AluSx SINE Alu 1 303 -9 556 201 114 13 chr20 41414118 41414267 -25253738 + L1ME3A LINE L1 6002 6165 -5 463 222 172 21 chr20 41414278 41414479 -25253526 - MIR SINE MIR 0 262 33 315 329 125 7 chr20 41414524 41414676 -25253329 - L3 LINE CR1 -16 1561 1392 373 308 60 56 chr20 41414910 41414973 -25253032 - MIR SINE MIR -3 259 198 3302 132 16 39 chr20 41414973 41415589 -25252416 + L1MA9 LINE L1 5709 6310 -2 373 308 60 56 chr20 41415589 41415775 -25252230 - MIR SINE MIR -64 198 9 396 319 148 44 chr20 41415795 41416112 -25251893 - L3 LINE CR1 -418 1159 810 247 260 0 0 chr20 41416374 41416424 -25251581 - L3 LINE CR1 -909 668 619 520 267 47 17 chr20 41417654 41417826 -25250179 - MER5B DNA MER1_type -1 177 1 531 113 0 0 chr20 41418573 41418653 -25249352 + (TG)n Simple_repeat Simple_repeat 2 81 0 695 203 0 0 chr20 41418661 41418779 -25249226 - FLAM_C SINE Alu -15 118 1 277 346 58 13 chr20 41419512 41419668 -25248337 + MIR SINE MIR 50 212 -50 220 264 69 35 chr20 41420256 41420343 -25247662 - L2 LINE L2 -13 3259 3170 760 221 108 29 chr20 41421073 41421987 -25246018 - L1ME3 LINE L1 -9 6964 5898 1143 141 104 4 chr20 41422010 41422279 -25245726 - MER33 DNA MER1_type -28 296 1 740 238 120 69 chr20 41422282 41422528 -25245477 - L1ME3 LINE L1 -1331 5626 5394 2066 124 3 0 chr20 41422528 41422850 -25245155 + AluSx SINE Alu 1 323 0 740 238 120 69 chr20 41422850 41423354 -25244651 - L1ME3 LINE L1 -1563 5394 4837 246 218 102 60 chr20 41423363 41423579 -25244426 - L1ME3 LINE L1 -4786 2171 1947 2400 115 0 0 chr20 41423599 41423911 -25244094 + AluSx SINE Alu 1 312 0 458 272 84 22 chr20 41423943 41424196 -25243809 - L1ME3 LINE L1 -5018 1929 1659 1891 167 0 10 chr20 41424202 41424508 -25243497 - AluJb SINE Alu -3 309 7 243 327 10 20 chr20 41424514 41424713 -25243292 - L1ME3 LINE L1 -5327 1532 1336 21 0 0 0 chr20 41425437 41425458 -25242547 + AT_rich Low_complexity Low_complexity 1 21 0 2281 272 109 24 chr20 41425468 41426470 -25241535 + L2 LINE L2 2110 3192 -121 501 203 17 42 chr20 41426574 41426692 -25241313 + L2 LINE L2 3197 3311 -2 180 369 48 60 chr20 41429148 41429400 -25238605 - L2 LINE L2 -81 3191 2943 227 291 102 26 chr20 41430815 41430892 -25237113 + MIR SINE MIR 73 153 -62 251 307 42 60 chr20 41431292 41431507 -25236498 + L2 LINE L2 2671 2881 -433 1966 137 17 3 chr20 41431777 41432069 -25235936 - AluSx SINE Alu -16 296 1 521 319 74 49 chr20 41432076 41432575 -25235430 - L2 LINE L2 -112 3201 2696 188 341 0 44 chr20 41433086 41433177 -25234828 + MIR3 SINE MIR 99 185 -23 213 346 29 29 chr20 41435310 41435414 -25232591 + L2 LINE L2 2988 3091 -181 223 362 53 40 chr20 41435543 41435695 -25232310 + L2 LINE L2 3104 3257 -15 664 237 85 59 chr20 41435874 41435972 -25232033 - MIR SINE MIR -6 256 162 1931 125 13 46 chr20 41435972 41436277 -25231728 - AluSx SINE Alu -17 295 1 664 237 85 59 chr20 41436277 41436414 -25231591 - MIR SINE MIR -100 162 15 2065 81 18 0 chr20 41436965 41437248 -25230757 + L1PA13 LINE L1 5876 6163 0 197 266 137 43 chr20 41437521 41437660 -25230345 - MIR SINE MIR -81 181 30 1842 154 0 3 chr20 41438803 41439111 -25228894 + AluJb SINE Alu 1 307 0 2325 256 94 75 chr20 41439130 41439375 -25228630 + L1MC4a LINE L1 5585 5824 -1984 7367 34 6 3 chr20 41439375 41440639 -25227366 + L1PA4 LINE L1 4888 6155 0 2325 256 94 75 chr20 41440639 41441862 -25226143 + L1MC4a LINE L1 5824 7091 -717 1810 171 3 19 chr20 41441862 41442178 -25225827 + AluJb SINE Alu 1 311 -1 2325 256 94 75 chr20 41442178 41442348 -25225657 + L1MC4a LINE L1 7091 7256 -552 302 263 0 0 chr20 41442366 41442442 -25225563 + L1MC4 LINE L1 7822 7897 -145 208 265 15 0 chr20 41442463 41442531 -25225474 + (TA)n Simple_repeat Simple_repeat 2 70 0 367 312 116 50 chr20 41442659 41443057 -25224948 + MLT1K LTR MaLR 165 588 0 426 280 107 18 chr20 41446618 41446786 -25221219 + MER5A DNA MER1_type 4 186 -3 1878 115 65 4 chr20 41446959 41447238 -25220767 + AluSx SINE Alu 1 296 -16 1707 196 89 24 chr20 41447536 41447908 -25220097 + MSTD LTR MaLR 1 396 0 231 254 0 32 chr20 41448124 41448187 -25219818 + (TATG)n Simple_repeat Simple_repeat 4 64 0 267 194 0 83 chr20 41448378 41448450 -25219555 + AluSp SINE Alu 117 182 -121 24 0 0 0 chr20 41448458 41448482 -25219523 + AT_rich Low_complexity Low_complexity 1 24 0 348 243 101 17 chr20 41448854 41449003 -25219002 + MIR3 SINE MIR 11 168 -65 291 243 184 10 chr20 41449187 41449290 -25218715 + MIR SINE MIR 31 151 -57 189 214 0 0 chr20 41450345 41450387 -25217618 + (TA)n Simple_repeat Simple_repeat 2 43 0 304 319 71 9 chr20 41452039 41452152 -25215853 - L2 LINE L2 -6 3266 3147 462 286 0 27 chr20 41453455 41453567 -25214438 - L2 LINE L2 -4 3268 3160 689 305 52 11 chr20 41453622 41453891 -25214114 + MARNA DNA Mariner 245 524 -62 207 0 0 0 chr20 41454482 41454505 -25213500 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 302 107 18 36 chr20 41454612 41454668 -25213337 + L1MB2 LINE L1 6115 6169 -2 411 357 62 26 chr20 41455059 41455286 -25212719 - MIR SINE MIR -6 256 22 1813 160 0 29 chr20 41455380 41455687 -25212318 + AluJo SINE Alu 1 298 -14 25 0 0 0 chr20 41455758 41455783 -25212222 + AT_rich Low_complexity Low_complexity 1 25 0 232 176 20 0 chr20 41456973 41457024 -25210981 + L1MC4a LINE L1 5144 5195 -951 1339 228 72 12 chr20 41457025 41457345 -25210660 - MER2 DNA MER2_type 0 345 7 704 260 51 38 chr20 41457354 41457870 -25210135 + L1MC4a LINE L1 5198 5319 -827 * 3129 153 133 41 chr20 41457462 41457873 -25210132 + L1MB7 LINE L1 5422 5921 -263 2202 123 3 0 chr20 41457873 41458183 -25209822 + AluSx SINE Alu 1 311 -1 3129 153 133 41 chr20 41458183 41458449 -25209556 + L1MB7 LINE L1 5921 6161 -23 421 299 92 50 chr20 41458458 41458558 -25209447 + L1ME4a LINE L1 5485 5579 -542 5442 148 38 24 chr20 41458558 41459446 -25208559 - MER54A LTR ERVL 0 901 1 421 299 92 50 chr20 41459446 41459900 -25208105 + L1ME4a LINE L1 5579 6062 -59 334 200 0 0 chr20 41461020 41461075 -25206930 + Tigger5 DNA MER2_type 1 55 -2268 * 345 192 14 27 chr20 41461044 41461117 -25206888 + Tigger5 DNA MER2_type 2251 2322 -1 439 312 74 49 chr20 41461292 41461577 -25206428 - L2 LINE L2 -1111 2203 1912 2491 66 0 3 chr20 41462214 41462515 -25205490 + AluY SINE Alu 1 300 -11 2342 98 0 3 chr20 41462626 41462923 -25205082 + AluSc SINE Alu 1 296 -13 468 271 106 24 chr20 41462995 41463165 -25204840 - MIR SINE MIR -78 184 1 2076 122 7 3 chr20 41463761 41464056 -25203949 + AluSq SINE Alu 1 296 -17 38 51 0 0 chr20 41464410 41464469 -25203536 + AT_rich Low_complexity Low_complexity 1 59 0 218 243 58 23 chr20 41464474 41464647 -25203358 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 182 261 65 0 chr20 41464728 41464774 -25203231 - L3 LINE CR1 -21 1556 1508 295 321 195 18 chr20 41464828 41465105 -25202900 - L3 LINE CR1 -127 1450 1125 22 0 0 0 chr20 41466500 41466522 -25201483 + AT_rich Low_complexity Low_complexity 1 22 0 190 250 120 54 chr20 41467043 41467135 -25200870 - MIR SINE MIR -48 214 117 8145 25 2 0 chr20 41468270 41469457 -25198548 + L1PA4 LINE L1 4964 6152 -3 2154 104 10 7 chr20 41469616 41469904 -25198101 - AluSq SINE Alu -24 289 1 461 299 48 11 chr20 41469916 41470103 -25197902 - L1ME LINE L1 -302 5819 5626 263 278 10 21 chr20 41471492 41471589 -25196416 + HAL1 LINE L1 2230 2325 -182 725 143 0 0 chr20 41472226 41472345 -25195660 + L1MA7 LINE L1 6163 6281 -10 2382 125 31 18 chr20 41473047 41473615 -25194390 + LTR10E LTR ERV1 1 633 0 1910 164 17 0 chr20 41473671 41473963 -25194042 + AluJb SINE Alu 1 297 -15 302 0 26 0 chr20 41474174 41474212 -25193793 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 8828 15 6 286 chr20 41474212 41476110 -25191895 - SVA Other Other -19 1367 2 251 346 8 0 chr20 41476157 41476287 -25191718 + L1ME1 LINE L1 5532 5662 -459 229 57 86 0 chr20 41477653 41477688 -25190317 + L1ME4a LINE L1 6074 6111 -10 348 275 12 58 chr20 41478564 41478735 -25189270 + L2 LINE L2 2996 3158 -155 482 219 123 9 chr20 41478788 41478902 -25189103 + MER6B DNA MER2_type 38 164 -46 279 0 0 0 chr20 41478951 41478982 -25189023 + (CA)n Simple_repeat Simple_repeat 2 32 0 294 300 56 0 chr20 41478988 41479078 -25188927 + L2 LINE L2 3219 3313 0 274 322 184 49 chr20 41479211 41479670 -25188335 + L2 LINE L2 1855 2250 -1064 282 56 0 0 chr20 41479670 41479706 -25188299 + (CA)n Simple_repeat Simple_repeat 2 37 0 274 322 184 49 chr20 41479706 41480130 -25187875 + L2 LINE L2 2250 2858 -456 277 333 112 54 chr20 41480206 41480464 -25187541 + L2 LINE L2 3000 3272 0 626 201 47 73 chr20 41480590 41480824 -25187181 - HAL1 LINE L1 -19 2488 2261 1078 142 28 11 chr20 41480824 41481000 -25187005 - MER58A DNA MER1_type 0 224 46 1884 232 190 50 chr20 41481030 41482063 -25185942 - HAL1 LINE L1 -309 2198 1022 225 356 55 0 chr20 41482531 41482604 -25185401 + L2 LINE L2 3159 3235 -37 220 294 73 0 chr20 41483276 41483344 -25184661 - MIR3 SINE MIR -21 187 115 334 248 141 41 chr20 41483796 41483917 -25184088 + MIR3 SINE MIR 9 141 -67 1384 224 73 0 chr20 41484148 41484478 -25183527 + L1ME1 LINE L1 5809 6162 -4 2378 78 10 0 chr20 41484901 41485197 -25182808 - AluSq SINE Alu -14 299 1 323 368 84 0 chr20 41485340 41485495 -25182510 - MIR3 SINE MIR -20 188 21 298 299 107 45 chr20 41485688 41485863 -25182142 - L2 LINE L2 -821 2493 2308 238 247 227 53 chr20 41485863 41486013 -25181992 + MER5B DNA MER1_type 2 177 -1 2980 193 22 0 chr20 41486214 41486722 -25181283 + LTR53 LTR ERVL 1 519 0 35 0 0 0 chr20 41489515 41489550 -25178455 + AT_rich Low_complexity Low_complexity 1 35 0 1059 147 95 11 chr20 41489561 41489751 -25178254 - MER2 DNA MER2_type -139 206 1 1655 101 13 0 chr20 41491193 41491421 -25176584 - AluSg/x SINE Alu -9 301 71 815 232 146 19 chr20 41491608 41491875 -25176130 - L1ME3A LINE L1 -9 6161 5861 830 192 23 17 chr20 41491880 41492057 -25175948 + LTR41 LTR ERVL 1 178 -595 292 313 12 0 chr20 41492537 41492617 -25175388 + LTR41 LTR ERVL 510 590 -183 2469 62 0 0 chr20 41492721 41493012 -25174993 - AluY SINE Alu -20 291 1 386 259 12 0 chr20 41493094 41493179 -25174826 + L2 LINE L2 3186 3271 -1 248 208 0 14 chr20 41493925 41493997 -25174008 + GA-rich Low_complexity Low_complexity 4 74 0 272 322 82 7 chr20 41494137 41494283 -25173722 - L3b LINE CR1 -323 1260 1104 2521 92 79 108 chr20 41494591 41495176 -25172829 + MER51A LTR ERV1 1 634 0 2033 93 42 28 chr20 41496207 41496496 -25171509 + AluSx SINE Alu 1 293 -19 525 284 144 10 chr20 41497596 41497790 -25170215 + MIR SINE MIR 22 241 -21 24 32 0 0 chr20 41498198 41498229 -25169776 + AT_rich Low_complexity Low_complexity 1 31 0 1123 124 0 62 chr20 41498332 41498526 -25169479 + AluSq SINE Alu 132 313 0 757 192 23 0 chr20 41498552 41498682 -25169323 + FLAM_A SINE Alu 1 133 0 2236 81 0 0 chr20 41498686 41498957 -25169048 + AluSx SINE Alu 36 306 -6 2183 107 0 10 chr20 41498959 41499259 -25168746 + AluSg SINE Alu 2 298 -12 199 375 39 19 chr20 41499733 41499837 -25168168 + L2 LINE L2 2516 2621 -693 1363 173 79 22 chr20 41500195 41500472 -25167533 + AluJb SINE Alu 13 305 -7 864 235 0 28 chr20 41500978 41501157 -25166848 - MIR SINE MIR -75 187 14 2356 88 0 3 chr20 41501198 41501493 -25166512 + AluSc SINE Alu 1 294 -15 257 279 107 21 chr20 41501591 41501731 -25166274 - L2 LINE L2 -12 3260 3109 6625 239 79 23 chr20 41502348 41505025 -25162980 + L1MCa LINE L1 775 3298 -3128 2279 76 13 25 chr20 41505025 41505339 -25162666 + AluSp SINE Alu 1 310 -3 6625 239 79 23 chr20 41505339 41505667 -25162338 + L1MCa LINE L1 3298 3606 -2820 5711 100 33 8 chr20 41505667 41506428 -25161577 + LTR17 LTR ERV1 1 780 0 6625 239 79 23 chr20 41506428 41507094 -25160911 + L1MCa LINE L1 3606 4743 -1683 233 195 25 110 chr20 41508035 41508153 -25159852 - MLT1J2 LTR MaLR -25 425 318 14690 43 5 1 chr20 41508692 41511164 -25156841 + L1PA5 LINE L1 3663 6141 -13 339 191 0 0 chr20 41511166 41511234 -25156771 + (CATATA)n Simple_repeat Simple_repeat 5 72 0 1874 118 0 8 chr20 41511250 41511512 -25156493 + AluSp SINE Alu 39 298 -15 2297 100 0 0 chr20 41511621 41511922 -25156083 + AluY SINE Alu 1 301 -10 2093 182 46 0 chr20 41513403 41513776 -25154229 + MLT1B LTR MaLR 1 390 0 238 157 98 0 chr20 41514389 41514440 -25153565 + LTR10B LTR ERV1 1 56 -491 1571 172 61 13 chr20 41514515 41514820 -25153185 + LTR10B LTR ERV1 250 547 0 2411 228 53 25 chr20 41514820 41515879 -25152126 + LTR10B-int LTR ERV1 5 1131 -6654 5301 224 7 23 chr20 41515884 41517070 -25150935 + BaEV-int LTR ERV1 873 2039 -4610 9992 247 19 20 chr20 41517073 41519478 -25148527 + BaEV-int LTR ERV1 4246 6649 0 1609 171 39 4 chr20 41519631 41519911 -25148094 + LTR10B LTR ERV1 258 547 0 307 270 252 0 chr20 41519911 41520026 -25147979 + L2 LINE L2 3129 3272 0 1067 212 24 38 chr20 41520097 41520385 -25147620 + L1ME3 LINE L1 5852 6135 -27 323 331 97 39 chr20 41520892 41521046 -25146959 + L2 LINE L2 2985 3147 -125 727 187 117 35 chr20 41521474 41521645 -25146360 + MIR SINE MIR 78 262 0 233 188 21 0 chr20 41522477 41522525 -25145480 + L1MB7 LINE L1 6122 6170 -14 1420 176 115 4 chr20 41522525 41522786 -25145219 - AluJb SINE Alu -22 290 1 256 209 104 117 chr20 41522792 41522875 -25145130 - MER112 DNA MER1_type -77 183 101 1993 128 38 0 chr20 41522875 41523164 -25144841 + AluSx SINE Alu 2 301 -11 256 209 104 117 chr20 41523164 41523243 -25144762 - MER112 DNA MER1_type -159 101 23 2007 117 0 11 chr20 41523387 41523670 -25144335 + AluSx SINE Alu 1 280 -32 180 0 0 0 chr20 41523671 41523691 -25144314 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 298 324 176 0 chr20 41523951 41524155 -25143850 - L2 LINE L2 -932 2382 2143 915 239 63 63 chr20 41524674 41525088 -25142917 + L1MC4 LINE L1 7629 8042 0 182 336 146 9 chr20 41525705 41525815 -25142190 - L2 LINE L2 -14 3258 3134 2326 94 0 13 chr20 41525899 41526033 -25141972 + AluSg SINE Alu 1 135 -175 2355 71 3 14 chr20 41526033 41526329 -25141676 + AluY SINE Alu 1 293 -18 2326 94 0 13 chr20 41526329 41526493 -25141512 + AluSg SINE Alu 135 295 -15 746 260 41 0 chr20 41526559 41526728 -25141277 - MER5B DNA MER1_type -1 177 2 195 338 104 104 chr20 41527021 41527299 -25140706 + L2 LINE L2 2992 3269 -3 578 250 44 12 chr20 41527669 41527829 -25140176 - MLT1I LTR MaLR -240 169 5 274 254 0 0 chr20 41527835 41527894 -25140111 + MIR SINE MIR 204 262 0 231 347 82 14 chr20 41528390 41528537 -25139468 + MIR3 SINE MIR 44 200 -8 758 153 73 0 chr20 41528972 41529096 -25138909 + FLAM_A SINE Alu 1 133 0 193 250 0 0 chr20 41529408 41529452 -25138553 + L3 LINE CR1 1533 1576 -1 2266 115 3 3 chr20 41529648 41529960 -25138045 - AluSx SINE Alu 0 312 1 2318 64 11 0 chr20 41530283 41530603 -25137402 + AluY SINE Alu 1 323 0 922 210 77 5 chr20 41531107 41531302 -25136703 - MER3 DNA MER1_type 0 209 1 634 210 85 62 chr20 41531310 41531429 -25136576 - MER5A DNA MER1_type 0 189 63 2134 109 0 48 chr20 41531429 41531740 -25136265 - AluSx SINE Alu -15 297 2 634 210 85 62 chr20 41531740 41531796 -25136209 - MER5A DNA MER1_type -126 63 10 * 683 245 133 14 chr20 41531779 41532065 -25135940 - MER5C DNA MER1_type -4 320 1 377 333 9 0 chr20 41534896 41535007 -25132998 + MIR SINE MIR 12 123 -139 212 373 0 0 chr20 41535040 41535115 -25132890 + L2 LINE L2 3186 3260 -12 29 47 0 0 chr20 41536033 41536076 -25131929 + AT_rich Low_complexity Low_complexity 1 43 0 360 274 133 60 chr20 41537668 41538102 -25129903 + L1M2 LINE L1 652 1449 -5400 362 275 87 97 chr20 41538478 41538787 -25129218 - L1M2 LINE L1 -5721 1128 823 303 272 243 0 chr20 41539083 41539256 -25128749 - L2 LINE L2 0 3313 3099 623 250 0 0 chr20 41539836 41539964 -25128041 - L2 LINE L2 -1 3312 3185 2502 60 0 3 chr20 41540253 41540554 -25127451 - AluY SINE Alu -11 300 1 849 270 73 37 chr20 41541831 41542184 -25125821 + MLT1J2 LTR MaLR 23 376 -33 197 200 292 0 chr20 41542228 41542293 -25125712 + L2 LINE L2 3162 3245 -27 271 330 84 48 chr20 41542350 41542659 -25125346 - L2 LINE L2 -338 2976 2657 482 253 45 26 chr20 41542750 41542904 -25125101 - MER103 DNA DNA -8 158 2 2394 73 0 3 chr20 41542941 41543267 -25124738 + AluY SINE Alu 1 311 0 1458 239 111 42 chr20 41543270 41543747 -25124258 - MLT1J LTR MaLR -1 510 1 2130 201 27 52 chr20 41543824 41544381 -25123624 - L1MB8 LINE L1 -1 6177 5635 614 278 109 53 chr20 41544399 41544719 -25123286 - L2 LINE L2 0 3313 2976 316 191 59 15 chr20 41544720 41544788 -25123217 - MARNA DNA Mariner -90 496 426 881 174 0 0 chr20 41544934 41545066 -25122939 - FLAM_C SINE Alu -1 132 1 471 215 277 15 chr20 41545387 41545473 -25122532 + MIR SINE MIR 15 77 -185 2225 121 0 7 chr20 41545473 41545779 -25122226 + AluSx SINE Alu 1 304 -8 471 215 277 15 chr20 41545779 41545887 -25122118 + MIR SINE MIR 77 260 -2 2259 99 0 0 chr20 41546381 41546663 -25121342 + AluSx SINE Alu 1 282 -30 255 93 0 0 chr20 41546666 41546709 -25121296 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2117 224 80 35 chr20 41546934 41547444 -25120561 + MLT1F LTR MaLR 3 535 -7 2136 133 110 38 chr20 41547613 41548012 -25119993 - MSTA LTR MaLR 0 428 1 21 0 0 0 chr20 41548343 41548364 -25119641 + AT_rich Low_complexity Low_complexity 1 21 0 5820 117 6 30 chr20 41548364 41549193 -25118812 - L1PA16 LINE L1 -9 6157 5349 1797 152 53 3 chr20 41549193 41549476 -25118529 - AluJb SINE Alu -15 297 1 5820 117 6 30 chr20 41549476 41550110 -25117895 - L1PA16 LINE L1 -817 5349 4701 347 196 155 0 chr20 41550110 41550207 -25117798 - MIR SINE MIR -37 225 114 2236 176 23 117 chr20 41550450 41551012 -25116993 + MLT2B2 LTR ERVL 1 509 -6 2469 85 0 0 chr20 41551043 41551349 -25116656 + AluSq SINE Alu 2 307 -6 2388 95 0 7 chr20 41551356 41551662 -25116343 + AluSx SINE Alu 1 304 -8 626 182 61 0 chr20 41551695 41551827 -25116178 + MER5A DNA MER1_type 2 141 -48 808 246 98 81 chr20 41552184 41552297 -25115708 - MLT1J2 LTR MaLR -3 443 333 2179 109 0 0 chr20 41552297 41552752 -25115253 - AluSx SINE Alu 0 455 1 808 246 98 81 chr20 41552752 41553067 -25114938 - MLT1J2 LTR MaLR -113 333 7 257 234 117 13 chr20 41553139 41553216 -25114789 + L2 LINE L2 3182 3266 -6 335 299 30 71 chr20 41553235 41553373 -25114632 - MER117 DNA MER1_type -4 193 63 2133 119 0 3 chr20 41553373 41553698 -25114307 - AluSx SINE Alu 0 324 1 335 299 30 71 chr20 41553698 41553755 -25114250 - MER117 DNA MER1_type -134 63 5 891 165 83 69 chr20 41553836 41554054 -25113951 - AluJo SINE Alu -5 307 87 2271 85 3 0 chr20 41554667 41554970 -25113035 + AluSp SINE Alu 1 304 0 490 140 0 19 chr20 41555838 41555945 -25112060 + (GA)n Simple_repeat Simple_repeat 1 105 0 218 235 12 0 chr20 41556020 41556101 -25111904 + (TGGA)n Simple_repeat Simple_repeat 4 85 0 201 323 15 0 chr20 41556135 41556200 -25111805 + (TGAA)n Simple_repeat Simple_repeat 4 69 0 195 188 0 0 chr20 41556214 41556262 -25111743 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 500 305 11 0 chr20 41556314 41556362 -25111643 + (TGAA)n Simple_repeat Simple_repeat 4 50 -129 2274 176 70 27 chr20 41556362 41556846 -25111159 + MLT1D LTR MaLR 1 505 0 500 305 11 0 chr20 41556846 41556971 -25111034 + (TGAA)n Simple_repeat Simple_repeat 50 179 0 183 281 0 0 chr20 41557003 41557085 -25110920 + (TGGA)n Simple_repeat Simple_repeat 4 85 0 297 317 12 24 chr20 41557114 41557278 -25110727 + (TAGA)n Simple_repeat Simple_repeat 1 162 0 1694 195 10 0 chr20 41557321 41557628 -25110377 + AluJo SINE Alu 1 310 -2 2350 98 0 3 chr20 41557630 41557917 -25110088 + AluSq SINE Alu 1 288 -25 276 77 0 0 chr20 41557917 41557956 -25110049 + (CATA)n Simple_repeat Simple_repeat 2 40 0 2350 98 0 3 chr20 41557956 41557974 -25110031 + AluSq SINE Alu 288 305 -8 344 351 56 56 chr20 41558144 41558486 -25109519 + L2 LINE L2 2930 3271 -1 659 268 27 7 chr20 41559013 41559240 -25108765 + MIR SINE MIR 25 256 -6 368 262 42 79 chr20 41559931 41560057 -25107948 + MIR SINE MIR 40 156 -106 2139 134 0 3 chr20 41560057 41560362 -25107643 + AluSx SINE Alu 1 304 -8 368 262 42 79 chr20 41560362 41560449 -25107556 + MIR SINE MIR 156 245 -17 357 274 39 73 chr20 41561012 41561294 -25106711 + L1M4 LINE L1 5113 5370 -776 327 265 106 7 chr20 41561434 41561585 -25106420 - L1M LINE L1 -2388 5420 5255 522 256 96 0 chr20 41561678 41561834 -25106171 - MIR SINE MIR -19 243 73 1577 159 20 30 chr20 41562629 41562925 -25105080 - AluJo SINE Alu -19 293 1 1663 154 35 21 chr20 41564573 41564858 -25103147 + AluJo SINE Alu 14 302 -10 1790 115 12 0 chr20 41564879 41565131 -25102874 + THE1B LTR MaLR 110 364 0 265 294 167 0 chr20 41565683 41565785 -25102220 + L2 LINE L2 3194 3312 -1 414 344 75 19 chr20 41565813 41566133 -25101872 - L2 LINE L2 -671 2643 2306 1428 228 91 39 chr20 41567277 41567763 -25100242 + LTR33A LTR ERVL 11 521 -2 278 111 19 0 chr20 41569211 41569231 -25098774 + (GA)n Simple_repeat Simple_repeat 1 19 -36 207 0 0 0 chr20 41569231 41569254 -25098751 + (CA)n Simple_repeat Simple_repeat 2 24 0 278 111 19 0 chr20 41569254 41569287 -25098718 + (GA)n Simple_repeat Simple_repeat 19 55 0 198 189 0 0 chr20 41569673 41569710 -25098295 - L2 LINE L2 -335 2978 2942 405 0 0 0 chr20 41570694 41570739 -25097266 + (TAA)n Simple_repeat Simple_repeat 3 47 0 278 276 0 35 chr20 41570760 41570847 -25097158 - MIR SINE MIR -140 122 39 2195 246 142 44 chr20 41570879 41571647 -25096358 + HAL1 LINE L1 1 843 -1664 616 177 107 60 chr20 41571696 41571911 -25096094 - LTR45B LTR ERV1 0 489 265 397 221 5 122 chr20 41572196 41572357 -25095648 + HAL1 LINE L1 1252 1384 -1123 2373 103 0 0 chr20 41572357 41572657 -25095348 - AluSq SINE Alu -13 300 1 397 221 5 122 chr20 41572657 41572708 -25095297 + HAL1 LINE L1 1384 1439 -1068 929 253 48 74 chr20 41572910 41573306 -25094699 - HAL1 LINE L1 -932 1575 1191 2118 124 0 3 chr20 41573306 41573597 -25094408 + AluSx SINE Alu 1 290 -22 929 253 48 74 chr20 41573597 41573662 -25094343 - HAL1 LINE L1 -1316 1191 1126 333 271 260 0 chr20 41574956 41575133 -25092872 + MIR SINE MIR 26 248 -14 207 156 0 0 chr20 41575141 41575173 -25092832 + C-rich Low_complexity Low_complexity 1 32 0 391 287 17 21 chr20 41575458 41575606 -25092399 + MIR SINE MIR 17 169 -58 435 229 85 26 chr20 41576332 41576485 -25091520 + MIR SINE MIR 27 188 -74 715 176 209 14 chr20 41577011 41577221 -25090784 + MIR SINE MIR 12 262 0 2126 231 20 58 chr20 41577584 41577781 -25090224 + L2 LINE L2 1291 1494 -1820 2386 78 0 37 chr20 41577781 41578102 -25089903 - AluY SINE Alu -2 309 1 2126 231 20 58 chr20 41578102 41578460 -25089545 + L2 LINE L2 1494 1817 -1497 1312 161 39 140 chr20 41578460 41578674 -25089331 - AluJb SINE Alu -1 301 132 324 70 0 0 chr20 41578674 41578717 -25089288 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 1312 161 39 140 chr20 41578717 41578837 -25089168 - AluJb SINE Alu -170 132 1 2126 231 20 58 chr20 41578837 41578972 -25089033 + L2 LINE L2 1817 1956 -1358 790 239 44 6 chr20 41578974 41579192 -25088813 + MLT1J2 LTR MaLR 2 221 -225 1337 275 75 5 chr20 41579232 41579617 -25088388 + LTR33 LTR ERVL 110 521 0 485 247 100 71 chr20 41579626 41579865 -25088140 + MLT1J1 LTR MaLR 201 446 0 1917 263 70 3 chr20 41579865 41580447 -25087558 + L2 LINE L2 1954 2574 -740 1568 259 39 14 chr20 41580461 41580986 -25087019 + L2 LINE L2 2768 3301 -12 2388 103 0 0 chr20 41581011 41581322 -25086683 + AluSq SINE Alu 1 311 -2 402 301 70 0 chr20 41582481 41582624 -25085381 + L2 LINE L2 1851 2003 -1311 210 343 15 0 chr20 41582650 41582717 -25085288 - L2 LINE L2 -36 3236 3169 345 272 132 34 chr20 41582819 41583289 -25084716 + L1ME4a LINE L1 4116 4631 -1515 548 299 132 7 chr20 41583335 41583650 -25084355 + L1M2 LINE L1 5352 5704 -463 2361 99 0 0 chr20 41583755 41584057 -25083948 + AluSx SINE Alu 2 303 -9 1323 230 79 41 chr20 41584260 41584678 -25083327 - MLT1J LTR MaLR -9 502 69 851 283 83 65 chr20 41584698 41585616 -25082389 - L1M4 LINE L1 -1483 4663 3730 301 281 115 81 chr20 41585747 41585829 -25082176 - L1M4 LINE L1 -2608 3538 3460 1661 195 0 13 chr20 41585829 41586137 -25081868 - AluJo SINE Alu -8 304 1 301 281 115 81 chr20 41586137 41586464 -25081541 - L1M4 LINE L1 -2686 3460 3115 256 238 69 10 chr20 41586464 41586565 -25081440 - HAL1 LINE L1 -867 1640 1534 770 289 97 4 chr20 41586579 41586917 -25081088 + L1ME4a LINE L1 5460 5825 -296 2066 137 3 0 chr20 41587354 41587661 -25080344 + AluSg SINE Alu 1 308 -2 320 250 64 36 chr20 41587963 41588103 -25079902 + MLT1I LTR MaLR 3 146 -263 471 219 44 51 chr20 41589373 41589510 -25078495 + L1ME3 LINE L1 5594 5729 -392 229 299 0 13 chr20 41589629 41589706 -25078299 + GA-rich Low_complexity Low_complexity 1 76 0 219 167 0 0 chr20 41589717 41589759 -25078246 + (CAGAGA)n Simple_repeat Simple_repeat 2 43 0 485 307 80 17 chr20 41590918 41591156 -25076849 - LTR16C LTR ERVL 0 491 239 1652 158 10 30 chr20 41591462 41591765 -25076240 + AluJo SINE Alu 1 297 -15 382 283 29 78 chr20 41592765 41592970 -25075035 + HAL1 LINE L1 27 221 -2286 2622 167 9 65 chr20 41593070 41593610 -25074395 + LTR9 LTR ERV1 10 519 -93 541 68 0 0 chr20 41593610 41593683 -25074322 - AluY SINE Alu -13 299 227 1219 68 12 6 chr20 41593683 41593845 -25074160 - AluY SINE Alu -148 163 1 496 175 23 40 chr20 41593847 41593953 -25074052 + LTR9 LTR ERV1 509 779 0 2024 241 92 65 chr20 41593956 41594639 -25073366 + HAL1 LINE L1 321 984 -1523 2090 107 11 0 chr20 41594639 41594920 -25073085 + AluSp SINE Alu 1 284 -29 2024 241 92 65 chr20 41594920 41594969 -25073036 + HAL1 LINE L1 984 1030 -1477 848 154 0 0 chr20 41594969 41595112 -25072893 + L1PA16 LINE L1 6024 6166 0 2024 241 92 65 chr20 41595112 41595316 -25072689 + HAL1 LINE L1 1030 1283 -1224 475 306 82 15 chr20 41595346 41595552 -25072453 + L1ME3 LINE L1 5732 5951 -211 336 64 0 0 chr20 41595813 41595860 -25072145 + (TC)n Simple_repeat Simple_repeat 2 48 0 180 0 0 0 chr20 41595862 41595882 -25072123 + (CA)n Simple_repeat Simple_repeat 1 20 0 1959 259 94 26 chr20 41595886 41596758 -25071247 + HAL1 LINE L1 1287 2217 -290 811 308 69 23 chr20 41596804 41597291 -25070714 + L1ME3A LINE L1 3641 4167 -1979 1041 219 0 0 chr20 41597291 41597483 -25070522 - MLT1D LTR MaLR -313 192 1 1219 267 110 75 chr20 41597508 41597872 -25070133 + L1ME3A LINE L1 4204 4554 -1616 2183 104 13 7 chr20 41597872 41598179 -25069826 - AluSx SINE Alu -3 309 1 1219 267 110 75 chr20 41598179 41598351 -25069654 + L1ME3A LINE L1 4554 4718 -1452 2142 115 3 0 chr20 41598351 41598663 -25069342 + AluSp SINE Alu 1 313 0 1219 267 110 75 chr20 41598663 41599072 -25068933 + L1ME3A LINE L1 4718 5111 -1059 925 124 0 0 chr20 41599072 41599201 -25068804 + FLAM_C SINE Alu 5 133 0 1219 267 110 75 chr20 41599201 41599954 -25068051 + L1ME3A LINE L1 5111 5956 -214 2178 98 0 3 chr20 41599991 41600287 -25067718 - AluSx SINE Alu -17 295 1 15144 30 2 1 chr20 41600752 41603306 -25064699 - L1PA5 LINE L1 -4 6150 3596 2065 92 0 4 chr20 41603306 41603587 -25064418 - AluY SINE Alu -31 280 1 1847 125 4 7 chr20 41603648 41603949 -25064056 + AluJb SINE Alu 2 301 0 852 162 7 0 chr20 41603950 41604098 -25063907 - FRAM SINE Alu -30 146 1 702 239 126 20 chr20 41604124 41604417 -25063588 + MER5C DNA MER1_type 1 324 0 561 158 32 21 chr20 41604800 41604895 -25063110 - U6 snRNA snRNA -11 96 1 1125 244 64 28 chr20 41605764 41606124 -25061881 + MER66A LTR ERV1 97 469 -9 367 210 80 30 chr20 41606198 41606298 -25061707 + MER66A-int LTR ERV1 161 265 -6411 790 215 69 160 chr20 41606304 41606741 -25061264 + MER66A-int LTR ERV1 400 796 -5880 479 230 0 0 chr20 41606743 41606830 -25061175 - AluJ/FLAM SINE Alu -224 88 2 5175 279 35 34 chr20 41606830 41609380 -25058625 + MER66A-int LTR ERV1 1740 4297 -3459 2138 92 0 26 chr20 41609380 41609684 -25058321 + AluSc SINE Alu 1 296 -13 5175 279 35 34 chr20 41609684 41609983 -25058022 + MER66A-int LTR ERV1 4297 4594 -3162 330 132 0 0 chr20 41609983 41610036 -25057969 + (CA)n Simple_repeat Simple_repeat 1 53 0 644 170 9 0 chr20 41610036 41610142 -25057863 - AluSg/x SINE Alu -21 291 185 259 288 0 0 chr20 41610281 41610347 -25057658 - PRIMA41-int LTR ERV1 -3135 4621 4556 2312 265 30 15 chr20 41610395 41611282 -25056723 + MER66A-int LTR ERV1 4608 6177 -1579 605 176 9 9 chr20 41611265 41611373 -25056632 + MER66A-int LTR ERV1 6569 6676 0 * 1144 219 78 100 chr20 41611408 41611833 -25056172 + MER66A LTR ERV1 100 468 -10 2159 97 41 81 chr20 41613627 41613927 -25054078 - MER51B LTR ERV1 0 377 66 1769 95 40 29 chr20 41613927 41614200 -25053805 + AluSx SINE Alu 1 276 -36 194 0 39 0 chr20 41614200 41614226 -25053779 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 2159 97 41 81 chr20 41614226 41614317 -25053688 - MER51B LTR ERV1 -309 68 1 891 297 71 47 chr20 41614429 41614877 -25053128 - L2 LINE L2 -18 3295 2837 2276 89 7 0 chr20 41614906 41615208 -25052797 - AluSp SINE Alu -9 304 1 243 337 196 26 chr20 41615373 41615643 -25052362 + L2 LINE L2 2917 3232 -40 1980 80 80 3 chr20 41615655 41615943 -25052062 - AluSx SINE Alu -2 310 1 215 261 263 32 chr20 41616107 41616277 -25051728 - MIR SINE MIR -23 239 34 312 246 0 0 chr20 41616552 41616617 -25051388 + MER3 DNA MER1_type 1 65 -144 314 283 197 33 chr20 41617218 41617370 -25050635 + MIR SINE MIR 4 180 -28 1765 203 62 104 chr20 41618412 41618536 -25049469 + MLT1F LTR MaLR 1 129 -413 1982 144 0 0 chr20 41618536 41618841 -25049164 + AluJo SINE Alu 1 305 -7 1765 203 62 104 chr20 41618841 41619282 -25048723 + MLT1F LTR MaLR 129 542 0 186 43 0 0 chr20 41619398 41619421 -25048584 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 524 182 0 0 chr20 41619432 41619520 -25048485 - HY4 scRNA scRNA -5 88 1 359 330 0 0 chr20 41619635 41619729 -25048276 + L2 LINE L2 3205 3298 -15 2154 96 26 3 chr20 41619731 41620033 -25047972 - AluSc SINE Alu 0 309 1 214 179 0 0 chr20 41620103 41620142 -25047863 - MIR SINE MIR -5 257 219 1885 60 48 4 chr20 41620265 41620515 -25047490 - AluY SINE Alu -12 299 39 1979 108 3 11 chr20 41620515 41620801 -25047204 - AluSx SINE Alu -14 298 15 1561 151 0 0 chr20 41621075 41621326 -25046679 - AluJb SINE Alu -18 294 44 787 293 138 17 chr20 41621643 41622049 -25045956 - LTR16B LTR ERVL -2 462 8 2003 140 0 0 chr20 41622060 41622360 -25045645 - AluSx SINE Alu -12 300 1 210 156 0 0 chr20 41622372 41622417 -25045588 + T-rich Low_complexity Low_complexity 1 45 0 928 300 71 21 chr20 41622474 41622854 -25045151 + MLT1J LTR MaLR 112 510 -1 323 215 114 0 chr20 41622857 41622936 -25045069 - MIR SINE MIR -73 189 102 308 299 7 69 chr20 41622998 41623142 -25044863 - MER5A DNA MER1_type 0 189 55 232 310 27 103 chr20 41623248 41623432 -25044573 - MER5A DNA MER1_type -11 178 9 782 276 38 17 chr20 41623446 41623685 -25044320 + MIR SINE MIR 19 262 0 623 342 42 17 chr20 41623923 41624277 -25043728 + L2 LINE L2 1739 2101 -1213 235 317 125 10 chr20 41624695 41624799 -25043206 + MIR3 SINE MIR 40 155 -53 237 240 248 16 chr20 41624911 41625036 -25042969 + L1MC/D LINE L1 5625 5778 -2030 488 145 0 0 chr20 41625178 41625247 -25042758 + Tigger2 DNA MER2_type 1 69 -2649 * 2569 136 36 23 chr20 41625231 41625673 -25042332 + Tigger2 DNA MER2_type 2267 2714 -4 304 214 86 0 chr20 41625746 41625816 -25042189 - MER5C DNA MER1_type -248 76 1 1457 167 22 25 chr20 41625881 41626156 -25041849 - AluJo SINE Alu -38 274 1 207 0 0 0 chr20 41626493 41626516 -25041489 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2148 111 0 3 chr20 41626555 41626862 -25041143 - AluSq SINE Alu -7 306 1 2156 110 0 3 chr20 41626891 41627170 -25040835 + AluSg SINE Alu 1 279 -31 369 0 0 0 chr20 41627170 41627211 -25040794 + (GAAA)n Simple_repeat Simple_repeat 4 44 0 1179 79 11 6 chr20 41627211 41627389 -25040616 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 2156 110 0 3 chr20 41627389 41627418 -25040587 + AluSg SINE Alu 277 309 -1 537 16 0 0 chr20 41627423 41627485 -25040520 + (GAAA)n Simple_repeat Simple_repeat 3 64 0 1694 125 3 49 chr20 41628227 41628514 -25039491 + AluSq SINE Alu 1 274 -39 1147 243 65 106 chr20 41628521 41629224 -25038781 + MER77 LTR ERV1 26 706 -4 1255 214 90 34 chr20 41629244 41629655 -25038350 - L1MC4 LINE L1 0 8042 7609 2124 101 0 7 chr20 41629679 41629976 -25038029 - AluSx SINE Alu -17 295 1 1871 59 0 4 chr20 41629983 41630222 -25037783 - AluY SINE Alu -10 301 64 239 67 0 0 chr20 41630222 41630252 -25037753 - AluY SINE Alu -269 30 1 24 0 0 0 chr20 41630255 41630279 -25037726 + AT_rich Low_complexity Low_complexity 1 24 0 413 206 38 69 chr20 41630279 41630410 -25037595 - L1MC4a LINE L1 -303 7505 7379 703 333 41 43 chr20 41630451 41630934 -25037071 + L1M3b LINE L1 3 484 -5797 1520 266 14 32 chr20 41631304 41631585 -25036420 + L1M3b LINE L1 1094 1364 -4917 2234 92 0 0 chr20 41631585 41631880 -25036125 + AluSg SINE Alu 5 299 -11 1520 266 14 32 chr20 41631880 41632094 -25035911 + L1M3b LINE L1 1364 1580 -4701 210 158 26 0 chr20 41632244 41632282 -25035723 + CT-rich Low_complexity Low_complexity 1 39 0 889 302 171 31 chr20 41632461 41633131 -25034874 + L2 LINE L2 2226 3069 -244 414 0 0 0 chr20 41633131 41633177 -25034828 + (CA)n Simple_repeat Simple_repeat 2 47 0 889 302 171 31 chr20 41633177 41633462 -25034543 + L2 LINE L2 3069 3313 0 332 279 81 76 chr20 41634760 41634804 -25033201 + MIR SINE MIR 63 105 -157 2308 60 0 26 chr20 41634804 41635106 -25032899 - AluY SINE Alu -17 294 1 332 279 81 76 chr20 41635106 41635155 -25032850 + MIR SINE MIR 105 152 -110 2784 168 8 15 chr20 41635155 41635630 -25032375 - MER70A LTR ERVL 0 472 1 332 279 81 76 chr20 41635630 41635732 -25032273 + MIR SINE MIR 152 260 -2 787 270 179 40 chr20 41636364 41636392 -25031613 - L2 LINE L2 0 3313 3290 1540 236 77 28 chr20 41636392 41636888 -25031117 - MLT2B1 LTR ERVL 0 520 1 787 270 179 40 chr20 41636888 41637307 -25030698 - L2 LINE L2 -23 3290 2804 420 290 34 28 chr20 41637440 41637616 -25030389 + L2 LINE L2 2923 3099 -173 241 220 0 0 chr20 41637991 41638041 -25029964 + LTR67 LTR ERVL 2 51 -506 773 209 148 17 chr20 41638070 41638300 -25029705 - MIR SINE MIR -1 261 2 238 213 0 0 chr20 41638455 41638502 -25029503 + MLT1L LTR MaLR 346 392 -223 919 151 0 0 chr20 41638581 41638720 -25029285 - MLT1D LTR MaLR 0 505 367 992 192 65 8 chr20 41638720 41639014 -25028991 - MLT1A1 LTR MaLR 0 365 1 * 1772 180 44 14 chr20 41639014 41639374 -25028631 - MLT1D LTR MaLR -134 371 1 2242 70 0 30 chr20 41639868 41640168 -25027837 - AluY SINE Alu -14 297 7 49 18 0 0 chr20 41640230 41640286 -25027719 + AT_rich Low_complexity Low_complexity 1 56 0 30 27 0 0 chr20 41640310 41640347 -25027658 + AT_rich Low_complexity Low_complexity 1 37 0 1860 137 3 3 chr20 41640347 41640474 -25027531 + AluSq SINE Alu 1 127 -184 753 107 0 0 chr20 41640474 41640596 -25027409 + (TA)n Simple_repeat Simple_repeat 1 122 0 1860 137 3 3 chr20 41640596 41640779 -25027226 + AluSq SINE Alu 126 311 0 512 343 13 23 chr20 41640923 41641232 -25026773 - L1MC4a LINE L1 -1886 5922 5617 376 250 34 11 chr20 41641244 41641332 -25026673 - MIR SINE MIR -82 180 91 484 265 75 88 chr20 41641460 41641754 -25026251 - MLT1I LTR MaLR 0 409 120 715 227 193 42 chr20 41641966 41642349 -25025656 + MLT1L LTR MaLR 175 615 0 283 302 58 0 chr20 41642350 41642436 -25025569 - L2 LINE L2 -40 3232 3142 731 231 30 18 chr20 41643206 41643375 -25024630 - MER5B DNA MER1_type 0 178 8 205 250 18 116 chr20 41643371 41643483 -25024522 + MIR SINE MIR 22 122 -86 * 2016 123 0 10 chr20 41643601 41643909 -25024096 - AluSx SINE Alu -7 305 1 286 83 0 42 chr20 41643919 41643967 -25024038 - L1MA10 LINE L1 -3 6331 6286 1048 160 0 55 chr20 41644001 41644201 -25023804 - AluJo SINE Alu -123 189 1 1805 203 18 49 chr20 41644212 41644289 -25023716 - L1ME1 LINE L1 -45 6121 6043 1794 102 149 80 chr20 41644289 41644366 -25023639 - MLT1B LTR MaLR -2 388 318 2294 94 3 0 chr20 41644366 41644673 -25023332 - AluSx SINE Alu -4 308 1 1794 102 149 80 chr20 41644673 41644958 -25023047 - MLT1B LTR MaLR -72 318 1 1805 203 18 49 chr20 41644958 41645333 -25022672 - L1ME1 LINE L1 -123 6043 5683 212 344 54 11 chr20 41645348 41645441 -25022564 - MIR SINE MIR -50 212 116 206 316 13 40 chr20 41645882 41645958 -25022047 - MIR3 SINE MIR -130 78 5 365 316 50 0 chr20 41646288 41646427 -25021578 - MIR SINE MIR -70 192 47 183 226 226 0 chr20 41646827 41646880 -25021125 + MIR SINE MIR 30 94 -168 2778 237 16 11 chr20 41646892 41647155 -25020850 - L1PA13 LINE L1 -6177 610 350 5297 86 106 1 chr20 41647155 41647902 -25020103 - LTR12 LTR ERV1 -1 825 1 2778 237 16 11 chr20 41647902 41648245 -25019760 - L1PA13 LINE L1 -6437 350 1 748 148 9 0 chr20 41648260 41648375 -25019630 + MSTD-int LTR MaLR 1620 1735 0 2038 153 67 27 chr20 41648375 41648747 -25019258 + MSTD LTR MaLR 1 387 -9 350 219 21 42 chr20 41649913 41650009 -25017996 + MIR SINE MIR 73 166 -96 424 221 0 13 chr20 41650010 41650087 -25017918 - MLT1D LTR MaLR -425 80 5 288 297 118 56 chr20 41650518 41650713 -25017292 + MLT1K LTR MaLR 366 572 -16 4930 61 2 2 chr20 41650899 41651509 -25016496 - L1PA6 LINE L1 0 6154 5545 195 42 0 0 chr20 41651655 41651679 -25016326 + (TG)n Simple_repeat Simple_repeat 1 24 0 706 198 111 32 chr20 41651815 41652067 -25015938 - ORSL DNA AcHobo -3 272 1 365 235 31 10 chr20 41652105 41652203 -25015802 + HAL1 LINE L1 743 842 -1665 262 348 44 6 chr20 41652557 41652715 -25015290 - L2 LINE L2 -212 3060 2897 532 280 21 42 chr20 41652747 41652900 -25015105 + MIR SINE MIR 5 155 -107 2875 112 19 2 chr20 41652900 41653327 -25014678 + MER57B LTR ERV1 1 434 0 532 280 21 42 chr20 41653327 41653362 -25014643 + MIR SINE MIR 155 189 -73 182 260 68 0 chr20 41653728 41653801 -25014204 - MIR SINE MIR -71 191 114 356 189 12 61 chr20 41653840 41653914 -25014091 + MLT1A1 LTR MaLR 268 365 -25 2272 117 0 0 chr20 41653914 41654214 -25013791 - AluSx SINE Alu -12 300 1 207 193 34 125 chr20 41655201 41655264 -25012741 - MIR SINE MIR -91 171 117 2287 202 68 19 chr20 41655264 41655780 -25012225 - MLT1F LTR MaLR 0 542 2 207 193 34 125 chr20 41655780 41655804 -25012201 - MIR SINE MIR -145 117 92 235 247 143 85 chr20 41656157 41656416 -25011589 + L1ME4a LINE L1 5759 6032 -89 1979 180 103 14 chr20 41656495 41657091 -25010914 - L1MC4a LINE L1 -130 7678 7057 22 70 0 0 chr20 41657098 41657141 -25010864 + AT_rich Low_complexity Low_complexity 1 43 0 180 163 70 23 chr20 41657299 41657342 -25010663 - MIR SINE MIR -64 144 100 184 194 0 0 chr20 41657432 41657468 -25010537 + L3 LINE CR1 1531 1566 -11 233 240 13 0 chr20 41657720 41657795 -25010210 + (TG)n Simple_repeat Simple_repeat 1 76 0 557 258 32 16 chr20 41658013 41658203 -25009802 + L2 LINE L2 3120 3312 -1 290 351 0 0 chr20 41659066 41659160 -25008845 - L2 LINE L2 0 3313 3220 523 181 0 0 chr20 41659484 41659567 -25008438 + MER81 DNA DNA 32 114 0 404 211 70 0 chr20 41659764 41659878 -25008127 + MIR SINE MIR 86 207 -55 404 299 14 77 chr20 41660006 41660227 -25007778 - L2 LINE L2 -434 2880 2674 13701 196 27 26 chr20 41660355 41662047 -25005958 - L1PA16 LINE L1 -10 6213 4524 1856 167 0 7 chr20 41662047 41662334 -25005671 - AluJb SINE Alu -27 285 1 13701 196 27 26 chr20 41662334 41662624 -25005381 - L1PA16 LINE L1 -1699 4524 4236 2237 102 3 13 chr20 41662624 41662928 -25005077 - AluSg SINE Alu -9 301 1 13701 196 27 26 chr20 41662928 41663619 -25004386 - L1PA16 LINE L1 -1987 4236 3547 2452 73 0 19 chr20 41663619 41663936 -25004069 - AluY SINE Alu 0 311 1 13701 196 27 26 chr20 41663936 41666789 -25001216 - L1PA16 LINE L1 -2676 3547 676 364 320 0 29 chr20 41666805 41666980 -25001025 - L1PA16 LINE L1 -5640 564 395 244 357 98 8 chr20 41667185 41667429 -25000576 - L1M2 LINE L1 -5782 1067 802 1364 290 78 52 chr20 41667679 41668644 -24999361 - L1PA12 LINE L1 -5508 2073 12 1499 197 64 51 chr20 41670719 41671110 -24996895 + MSTD LTR MaLR 1 396 0 181 300 180 13 chr20 41671329 41671479 -24996526 + L2 LINE L2 2565 2739 -575 1816 170 3 13 chr20 41671489 41671789 -24996216 + AluJo SINE Alu 1 297 -15 22 0 0 0 chr20 41671982 41672004 -24996001 + AT_rich Low_complexity Low_complexity 1 22 0 525 253 69 98 chr20 41672672 41673154 -24994851 + L1MC4a LINE L1 5649 6120 -1 3660 119 19 3 chr20 41673680 41674245 -24993760 - L1PB2 LINE L1 -2 6149 5576 1898 141 35 7 chr20 41674630 41674920 -24993085 - AluSx SINE Alu -14 298 1 703 118 35 7 chr20 41674973 41675117 -24992888 + CT-rich Low_complexity Low_complexity 4 151 0 2002 128 0 0 chr20 41675124 41675397 -24992608 - AluJb SINE Alu -39 273 1 2565 152 38 26 chr20 41675403 41675937 -24992068 - L1MB8 LINE L1 0 6178 5639 4537 213 58 35 chr20 41676093 41676487 -24991518 - L1MB8 LINE L1 -550 5634 5250 6020 86 78 0 chr20 41676487 41678002 -24990003 - L1PA11 LINE L1 0 6174 4573 4537 213 58 35 chr20 41678002 41679126 -24988879 - L1MB8 LINE L1 -934 5250 3144 450 261 5 28 chr20 41679126 41679280 -24988725 + LTR16A1 LTR ERVL 347 457 0 2405 103 0 0 chr20 41679723 41680035 -24987970 - AluSx SINE Alu 0 312 1 338 303 62 47 chr20 41680039 41680250 -24987755 - L1M4 LINE L1 -990 5156 4943 487 295 27 0 chr20 41680300 41680449 -24987556 + MIR SINE MIR 59 211 -51 243 61 0 0 chr20 41680670 41680703 -24987302 + (TAA)n Simple_repeat Simple_repeat 3 35 0 13866 94 13 3 chr20 41681073 41683819 -24984186 - L1PA8 LINE L1 -1 6171 3413 2186 173 38 42 chr20 41684511 41685014 -24982991 + Charlie4a DNA MER1_type 2 502 -6 7160 59 7 0 chr20 41685020 41686638 -24981367 + L1PA5 LINE L1 4524 6152 -2 1655 113 47 106 chr20 41687071 41687391 -24980614 - AluSx SINE Alu -11 301 1 458 138 0 0 chr20 41687406 41687471 -24980534 - AluJ/FRAM SINE Alu -18 294 230 334 176 29 29 chr20 41687471 41687513 -24980492 - AluJo/FRAM SINE Alu -29 273 229 2009 103 11 4 chr20 41687513 41687784 -24980221 - AluSx SINE Alu -37 275 3 334 176 29 29 chr20 41687784 41687809 -24980196 - AluJo/FRAM SINE Alu -72 230 206 208 281 49 0 chr20 41688780 41688862 -24979143 + MIR SINE MIR 60 145 -63 656 13 0 0 chr20 41688912 41688988 -24979017 - AluYb8 SINE Alu -11 307 232 220 300 0 0 chr20 41689006 41689066 -24978939 + MIR SINE MIR 203 262 0 912 283 87 30 chr20 41689583 41689951 -24978054 + MLT1J2 LTR MaLR 60 448 -2 353 226 69 39 chr20 41690049 41690151 -24977854 - L2 LINE L2 -12 3301 3197 238 304 11 33 chr20 41690448 41690540 -24977465 + L2 LINE L2 3179 3268 -4 2067 143 0 0 chr20 41690614 41690907 -24977098 - AluSx SINE Alu -17 295 3 1235 258 48 36 chr20 41691905 41692347 -24975658 + LTR16A1 LTR ERVL 10 456 -1 230 340 78 13 chr20 41692935 41693088 -24974917 - MIR SINE MIR -80 182 20 1151 194 37 0 chr20 41693111 41693327 -24974678 + MER58A DNA MER1_type 1 224 0 227 317 84 21 chr20 41693424 41693566 -24974439 + MIR SINE MIR 48 198 -64 657 142 19 0 chr20 41693587 41693693 -24974312 + L1PA15 LINE L1 6053 6160 -5 413 217 89 12 chr20 41693695 41693755 -24974250 - MIR SINE MIR -15 247 193 181 306 0 0 chr20 41693755 41693804 -24974201 + L2 LINE L2 3263 3311 -2 413 217 89 12 chr20 41693804 41693877 -24974128 - MIR SINE MIR -69 193 89 1031 252 34 34 chr20 41694498 41694623 -24973382 - LTR16C LTR ERVL 0 491 367 1922 138 15 56 chr20 41694623 41695014 -24972991 + THE1C LTR MaLR 1 375 0 1031 252 34 34 chr20 41695014 41695186 -24972819 - LTR16C LTR ERVL -123 368 194 687 311 50 5 chr20 41695309 41695531 -24972474 + MIR SINE MIR 31 262 0 490 276 31 36 chr20 41696718 41696771 -24971234 - MIR SINE MIR -2 260 208 1837 97 115 7 chr20 41696771 41697040 -24970965 - AluSg1 SINE Alu -7 302 5 490 276 31 36 chr20 41697040 41697178 -24970827 - MIR SINE MIR -54 208 70 1035 280 48 38 chr20 41697182 41697542 -24970463 - MLT1I LTR MaLR 0 409 63 304 278 31 0 chr20 41697681 41697778 -24970227 + MIR SINE MIR 30 129 -79 1263 248 65 3 chr20 41697779 41698089 -24969916 - LTR16C LTR ERVL 0 491 163 686 268 118 0 chr20 41698942 41699162 -24968843 + MIR SINE MIR 12 257 -5 289 370 24 0 chr20 41699341 41699506 -24968499 + L2 LINE L2 2914 3082 -190 421 240 52 0 chr20 41699535 41699631 -24968374 - MER96B DNA MER1_type? 0 417 317 905 77 0 0 chr20 41699642 41699759 -24968246 - L1PA8 LINE L1 -281 5891 5775 * 947 94 0 0 chr20 41699754 41699882 -24968123 + L1PA8 LINE L1 5904 6031 -141 2019 90 0 0 chr20 41699759 41700022 -24967983 + L1PA8 LINE L1 5904 6171 -1 606 249 97 100 chr20 41700133 41700422 -24967583 + MLT1H LTR MaLR 262 549 0 368 293 173 18 chr20 41700425 41700766 -24967239 + L2 LINE L2 2920 3313 0 534 253 155 21 chr20 41701317 41701511 -24966494 + MIR SINE MIR 16 235 -27 270 0 0 0 chr20 41701761 41701791 -24966214 + (CA)n Simple_repeat Simple_repeat 2 31 0 690 178 7 37 chr20 41702470 41702605 -24965400 + MLT1B LTR MaLR 1 131 -259 304 267 118 56 chr20 41703540 41703735 -24964270 - MIR SINE MIR -31 231 25 342 298 173 12 chr20 41703825 41703993 -24964012 - MIR SINE MIR -22 240 46 1536 225 51 34 chr20 41704963 41705031 -24962974 + MER119 DNA MER1_type 1 66 -517 7889 21 0 0 chr20 41705031 41706056 -24961949 - L1PA2 LINE L1 0 6155 5130 1536 225 51 34 chr20 41706056 41706400 -24961605 + MER119 DNA MER1_type 66 420 -163 5842 138 36 26 chr20 41706400 41707351 -24960654 - L1MA6 LINE L1 -14 6286 5295 2484 97 0 0 chr20 41707351 41707660 -24960345 - AluSx SINE Alu -3 309 1 5842 138 36 26 chr20 41707660 41708552 -24959453 - L1MA6 LINE L1 -1005 5295 4413 1329 210 0 4 chr20 41708552 41708804 -24959201 + AluJb SINE Alu 40 290 -22 372 189 67 0 chr20 41708804 41708894 -24959111 - L1MA6 LINE L1 -1726 4420 4325 370 204 172 25 chr20 41708894 41709051 -24958954 + MER119 DNA MER1_type 404 583 0 848 316 85 27 chr20 41709054 41709535 -24958470 - LTR33 LTR ERVL -12 509 1 384 250 25 8 chr20 41709608 41709728 -24958277 - MIR SINE MIR 0 262 141 1694 154 3 86 chr20 41709854 41710179 -24957826 - AluSx SINE Alu -14 298 1 26 0 0 0 chr20 41710200 41710226 -24957779 + AT_rich Low_complexity Low_complexity 1 26 0 259 290 0 0 chr20 41710925 41710994 -24957011 + (CAT)n Simple_repeat Simple_repeat 1 69 0 626 191 147 7 chr20 41711051 41711187 -24956818 + MER5A DNA MER1_type 1 155 -34 1830 180 40 0 chr20 41711932 41712260 -24955745 - MER58B DNA MER1_type 0 341 1 278 352 57 0 chr20 41712261 41712366 -24955639 + L2 LINE L2 3190 3300 -13 225 0 0 0 chr20 41712366 41712391 -24955614 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 426 69 0 0 chr20 41713302 41713360 -24954645 + (TA)n Simple_repeat Simple_repeat 1 58 0 693 286 0 0 chr20 41713528 41713675 -24954330 + MLT1K LTR MaLR 117 263 -325 2533 79 0 0 chr20 41713753 41714057 -24953948 - AluSg SINE Alu -6 304 1 251 238 0 12 chr20 41714230 41714314 -24953691 + CT-rich Low_complexity Low_complexity 3 85 0 235 245 120 74 chr20 41714416 41714632 -24953373 + L3 LINE CR1 1260 1485 -92 2452 143 9 62 chr20 41714632 41715067 -24952938 - MLT2D LTR ERVL 0 414 3 11709 178 49 1 chr20 41715069 41717097 -24950908 - ERVL-D LTR ERVL -7 5757 3634 1113 85 30 12 chr20 41717097 41717261 -24950744 - MLT2D LTR ERVL -246 168 2 879 200 27 11 chr20 41717428 41717613 -24950392 - MER5A DNA MER1_type 0 189 2 429 195 76 27 chr20 41717659 41717800 -24950205 + MIR SINE MIR 20 164 -63 803 180 71 38 chr20 41719284 41719400 -24948605 - MER5A DNA MER1_type 0 189 63 2114 142 0 3 chr20 41719400 41719711 -24948294 + AluSx SINE Alu 1 310 -2 803 180 71 38 chr20 41719711 41719777 -24948228 - MER5A DNA MER1_type -126 63 1 884 245 48 0 chr20 41720873 41721061 -24946944 + MER58A DNA MER1_type 1 197 -27 324 0 0 0 chr20 41721061 41721097 -24946908 + (TA)n Simple_repeat Simple_repeat 2 37 0 42867 51 8 0 chr20 41721103 41727202 -24940803 - L1PA4 LINE L1 0 6155 11 26 0 0 0 chr20 41727404 41727430 -24940575 + AT_rich Low_complexity Low_complexity 1 26 0 708 139 48 24 chr20 41727511 41727677 -24940328 - L1MD3 LINE L1 0 7995 7826 2110 186 30 61 chr20 41727830 41728053 -24939952 - MSTB LTR MaLR 0 426 197 189 0 0 0 chr20 41728053 41728074 -24939931 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 3737 44 0 9 chr20 41728074 41728529 -24939476 - L1PA7 LINE L1 -13 6141 5691 2110 186 30 61 chr20 41728529 41728545 -24939460 - MSTB LTR MaLR -228 198 183 2316 84 0 42 chr20 41728545 41728854 -24939151 - AluY SINE Alu -15 296 1 2110 186 30 61 chr20 41728854 41729052 -24938953 - MSTB LTR MaLR -243 183 1 7625 214 60 36 chr20 41729798 41731813 -24936192 + L1MDa LINE L1 18 1982 -4739 2045 137 0 16 chr20 41731813 41732128 -24935877 - AluSx SINE Alu -2 310 1 7625 214 60 36 chr20 41732128 41732506 -24935499 + L1MDa LINE L1 1982 2349 -4372 2815 178 27 4 chr20 41732506 41732990 -24935015 - LTR42 LTR ERVL 0 495 1 7625 214 60 36 chr20 41732990 41733229 -24934776 + L1MDa LINE L1 2349 2848 -3873 1774 238 52 35 chr20 41733316 41733828 -24934177 + L1ME3 LINE L1 5587 6108 -62 2107 148 0 0 chr20 41733828 41734125 -24933880 - AluSx SINE Alu -15 297 1 1774 238 52 35 chr20 41734125 41734189 -24933816 + L1ME3 LINE L1 6108 6169 -1 287 222 16 0 chr20 41735575 41735638 -24932367 + MIR SINE MIR 40 103 -105 2222 109 0 0 chr20 41736738 41737043 -24930962 - AluSg SINE Alu 0 305 1 228 277 60 12 chr20 41738129 41738212 -24929793 - MIR SINE MIR -10 252 166 606 232 56 90 chr20 41738303 41738536 -24929469 + MIR SINE MIR 26 250 -12 186 274 95 12 chr20 41738765 41738849 -24929156 + L2 LINE L2 3168 3258 -14 22 0 0 0 chr20 41739780 41739802 -24928203 + AT_rich Low_complexity Low_complexity 1 22 0 893 315 52 34 chr20 41739904 41740189 -24927816 - L3 LINE CR1 -2 1575 1276 2332 87 3 0 chr20 41740189 41740478 -24927527 + AluSx SINE Alu 2 291 -21 893 315 52 34 chr20 41740478 41740668 -24927337 - L3 LINE CR1 -301 1276 1091 180 315 185 0 chr20 41740735 41740913 -24927092 - L3 LINE CR1 -693 884 674 314 229 253 12 chr20 41741115 41741285 -24926720 - L1ME4a LINE L1 -207 5914 5704 306 272 87 11 chr20 41741306 41741398 -24926607 - L1ME4a LINE L1 -471 5650 5552 1577 118 0 0 chr20 41741713 41741917 -24926088 + AluSg/x SINE Alu 90 293 -17 347 252 150 14 chr20 41742495 41742642 -24925363 - MLT1J LTR MaLR -20 491 325 323 273 86 23 chr20 41742895 41743023 -24924982 + MIR3 SINE MIR 30 165 -43 873 230 15 36 chr20 41743036 41743232 -24924773 - MER63A DNA MER1_type -7 203 12 493 267 30 0 chr20 41743676 41743807 -24924198 - Charlie2 DNA MER1_type -864 1998 1864 616 208 45 0 chr20 41743823 41743977 -24924028 - L1MD1 LINE L1 -1 6241 6081 7161 115 30 9 chr20 41744104 41745059 -24922946 - L1MA3 LINE L1 -1 6304 5303 2192 107 40 0 chr20 41745059 41745359 -24922646 - AluSp SINE Alu -1 312 1 7161 115 30 9 chr20 41745359 41745760 -24922245 - L1MA3 LINE L1 -1002 5303 4912 558 226 155 13 chr20 41745913 41746068 -24921937 + MER5A DNA MER1_type 7 183 -6 2255 121 38 3 chr20 41746077 41746450 -24921555 + L1MA5A LINE L1 5909 6294 -3 180 347 64 23 chr20 41746949 41747122 -24920883 - MIR SINE MIR 0 262 83 2998 172 18 4 chr20 41747139 41747632 -24920373 + MER54A LTR ERVL 7 506 -395 1374 179 16 4 chr20 41747617 41747863 -24920142 + MER73 LTR ERVL 396 644 0 * 220 287 81 0 chr20 41748026 41748113 -24919892 - MIR SINE MIR -48 214 121 1351 157 38 22 chr20 41748177 41748444 -24919561 + L1MB8 LINE L1 5452 5722 -462 560 194 10 0 chr20 41748444 41748547 -24919458 + LTR28 LTR ERV1 1 104 -916 567 271 13 67 chr20 41748551 41748776 -24919229 + MER52A LTR ERV1 1262 1474 -281 629 221 19 19 chr20 41748776 41748934 -24919071 + MER52A LTR ERV1 1598 1755 0 2330 157 38 7 chr20 41749024 41749470 -24918535 + L1MB8 LINE L1 5716 6175 -3 303 226 78 10 chr20 41749616 41749718 -24918287 + MER5B DNA MER1_type 54 162 -16 24 0 0 0 chr20 41749946 41749970 -24918035 + AT_rich Low_complexity Low_complexity 1 24 0 1532 276 48 28 chr20 41750398 41750895 -24917110 - MLT1J LTR MaLR 0 511 5 317 198 94 21 chr20 41751125 41751221 -24916784 - MIR SINE MIR -81 181 79 182 182 0 0 chr20 41752752 41752785 -24915220 + MIR SINE MIR 63 95 -167 245 351 0 0 chr20 41753476 41753570 -24914435 + MIR SINE MIR 169 262 0 589 231 30 0 chr20 41753690 41753824 -24914181 - MER103 DNA DNA -20 146 9 236 276 230 0 chr20 41754268 41754355 -24913650 - MIR SINE MIR -65 143 37 358 209 23 23 chr20 41754358 41754444 -24913561 - L2 LINE L2 -5 3308 3223 592 259 64 36 chr20 41755912 41756132 -24911873 + LTR33 LTR ERVL 25 250 -271 2115 158 28 40 chr20 41756289 41756633 -24911372 - L1MB5 LINE L1 -6 6168 5828 1706 114 153 0 chr20 41756633 41756888 -24911117 - AluSq SINE Alu -17 296 3 2115 158 28 40 chr20 41756888 41756943 -24911062 - L1MB5 LINE L1 -346 5828 5774 925 164 73 23 chr20 41756969 41757146 -24910859 + MER5A DNA MER1_type 3 188 -1 303 244 26 0 chr20 41757150 41757228 -24910777 + LTR33 LTR ERVL 440 519 -2 620 233 5 29 chr20 41757335 41757591 -24910414 + LTR16C LTR ERVL 265 491 0 328 350 41 16 chr20 41758600 41758794 -24909211 + LTR16C LTR ERVL 128 326 -165 720 231 7 0 chr20 41758853 41759000 -24909005 - LTR16A LTR ERVL -2 448 301 3152 153 12 12 chr20 41759204 41759719 -24908286 - MLT2B1 LTR ERVL 0 520 6 230 382 22 0 chr20 41759973 41760062 -24907943 - L3 LINE CR1 -29 1548 1458 233 314 195 18 chr20 41760126 41760295 -24907710 - L3 LINE CR1 -226 1351 1153 397 373 62 14 chr20 41760419 41760857 -24907148 + L2 LINE L2 2596 3053 -219 990 135 0 0 chr20 41760918 41761096 -24906909 + (TCCC)n Simple_repeat Simple_repeat 1 178 0 699 228 0 0 chr20 41761112 41761292 -24906713 + CT-rich Low_complexity Low_complexity 1 180 0 959 220 123 36 chr20 41761336 41761695 -24906310 - L1ME3 LINE L1 -107 6055 5666 2324 121 140 11 chr20 41761695 41762074 -24905931 - MSTA LTR MaLR 0 428 1 2452 56 0 0 chr20 41762102 41762414 -24905591 - AluY SINE Alu 0 312 1 458 278 40 13 chr20 41762486 41762637 -24905368 + MLT1I LTR MaLR 63 217 -192 5093 146 41 13 chr20 41762652 41763907 -24904098 + L1MA4A LINE L1 4936 6155 -1 431 331 29 11 chr20 41763939 41764114 -24903891 + MLT1I LTR MaLR 232 409 0 313 370 0 9 chr20 41764230 41764338 -24903667 + L2 LINE L2 3164 3270 -2 298 274 36 0 chr20 41764416 41764500 -24903505 - L1M4c LINE L1 -4919 1465 1379 378 340 47 19 chr20 41764504 41764716 -24903289 - L3 LINE CR1 -497 1080 863 807 296 102 56 chr20 41765105 41765366 -24902639 - L1ME3 LINE L1 -847 5299 5052 2163 147 19 11 chr20 41765366 41765726 -24902279 - L1MA6 LINE L1 0 6300 5938 807 296 102 56 chr20 41765726 41766863 -24901142 - L1ME3 LINE L1 -1094 5052 3836 7810 28 2 0 chr20 41766865 41767764 -24900241 - L1PA3 LINE L1 -1 6154 5254 1315 54 0 0 chr20 41767771 41767939 -24900066 + L1PA3 LINE L1 5090 5257 -889 29 28 0 0 chr20 41768034 41768070 -24899935 + AT_rich Low_complexity Low_complexity 1 36 0 313 80 40 0 chr20 41768270 41768320 -24899685 - Alu SINE Alu 0 301 250 31 0 0 0 chr20 41768354 41768385 -24899620 + AT_rich Low_complexity Low_complexity 1 31 0 544 280 23 101 chr20 41768397 41768654 -24899351 + MLT1I LTR MaLR 147 383 -26 252 297 43 47 chr20 41768763 41768995 -24899010 - L1ME3 LINE L1 -2579 3567 3337 1068 288 109 26 chr20 41769281 41769747 -24898258 - MLT1J LTR MaLR -6 505 1 26 50 0 0 chr20 41770737 41770777 -24897228 + AT_rich Low_complexity Low_complexity 1 40 0 1884 119 30 3 chr20 41770788 41771083 -24896922 - L1MA8 LINE L1 -136 6155 5853 309 93 0 0 chr20 41771163 41771206 -24896799 + MADE1 DNA Mariner 1 43 -37 435 291 28 50 chr20 41771484 41771663 -24896342 - MLT1J LTR MaLR -49 462 288 636 147 0 0 chr20 41771682 41771777 -24896228 - MER81 DNA DNA -15 99 5 1790 241 101 65 chr20 41771789 41772481 -24895524 - MER21B LTR ERV1 -125 738 22 879 301 54 0 chr20 41772515 41772774 -24895231 - MLT1J LTR MaLR -236 275 3 490 212 0 20 chr20 41772868 41772967 -24895038 - Tigger5 DNA MER2_type -2226 97 1 430 240 102 49 chr20 41772967 41773213 -24894792 - L1ME3 LINE L1 -3219 2927 2669 252 259 19 56 chr20 41773502 41773610 -24894395 - L1ME LINE L1 -555 5566 5463 2088 100 27 3 chr20 41774165 41774466 -24893539 - L1MA5A LINE L1 0 6297 5990 324 342 0 0 chr20 41774485 41774599 -24893406 - MIR SINE MIR -80 182 69 191 286 103 32 chr20 41774591 41774717 -24893288 + L2 LINE L2 3038 3172 -141 * 1898 208 63 67 chr20 41774733 41775239 -24892766 + MLT1F LTR MaLR 35 538 -4 413 298 76 8 chr20 41775246 41775377 -24892628 + L2 LINE L2 3132 3271 -1 920 253 47 12 chr20 41775965 41776222 -24891783 - LTR16C LTR ERVL -38 453 188 2158 147 42 31 chr20 41776242 41776602 -24891403 + THE1B LTR MaLR 1 364 0 249 288 0 0 chr20 41777241 41777314 -24890691 + L2 LINE L2 3160 3232 -81 2086 207 15 22 chr20 41777321 41777340 -24890665 - MER65C LTR ERV1 -5 456 438 1507 150 0 78 chr20 41777340 41777634 -24890371 + AluSx SINE Alu 39 309 -3 2086 207 15 22 chr20 41777634 41778073 -24889932 - MER65C LTR ERV1 -23 438 1 373 270 11 0 chr20 41778073 41778162 -24889843 - MER65C-int LTR ERV1 0 4871 4782 2326 191 19 22 chr20 41778416 41778877 -24889128 - MER65C LTR ERV1 -1 460 1 380 262 36 0 chr20 41778878 41778962 -24889043 + L2 LINE L2 3226 3312 -1 247 169 91 26 chr20 41779000 41779077 -24888928 - MLT1J1 LTR MaLR 0 446 365 2305 211 14 54 chr20 41779080 41779669 -24888336 - L1MC4 LINE L1 0 8042 7478 764 208 82 0 chr20 41779668 41779827 -24888178 - L1MC4 LINE L1 -1412 6630 6459 * 1007 263 51 33 chr20 41780059 41780390 -24887615 - MLT1J1 LTR MaLR -68 378 42 596 259 80 33 chr20 41780843 41781055 -24886950 + MIR SINE MIR 28 249 -13 282 227 21 124 chr20 41782526 41782623 -24885382 + MIR SINE MIR 112 198 -64 577 178 0 9 chr20 41783041 41783148 -24884857 - LTR16C LTR ERVL -19 472 367 1084 256 9 0 chr20 41783185 41783404 -24884601 + MER58A DNA MER1_type 4 224 0 499 236 73 30 chr20 41783473 41783638 -24884367 - LTR16C LTR ERVL -141 350 179 192 324 21 69 chr20 41783662 41783807 -24884198 - MER5A DNA MER1_type -2 187 50 1220 222 5 0 chr20 41783892 41784108 -24883897 - MER58A DNA MER1_type -4 220 4 314 275 108 24 chr20 41784115 41784271 -24883734 + MIR SINE MIR 19 183 -66 1500 60 0 0 chr20 41785331 41785513 -24882492 - L1MA1 LINE L1 0 6302 6121 462 141 0 0 chr20 41785513 41785591 -24882414 + L1MA1 LINE L1 6045 6122 -180 1414 241 118 6 chr20 41785737 41786094 -24881911 - MLT1H LTR MaLR 0 549 153 348 159 0 0 chr20 41786102 41786165 -24881840 - L1MD2 LINE L1 -3 6356 6294 393 268 28 49 chr20 41786167 41786309 -24881696 - L1M4 LINE L1 -844 5302 5164 6797 95 39 0 chr20 41786316 41787561 -24880444 - L1PA14 LINE L1 0 6161 4897 3281 182 11 9 chr20 41787565 41788201 -24879804 + L1PA14 LINE L1 4235 4871 -1275 2075 244 32 47 chr20 41788197 41788966 -24879039 - L1M4 LINE L1 -970 5176 4419 * 3493 184 223 19 chr20 41788952 41789568 -24878437 - L1MDa LINE L1 -4375 2165 1675 213 39 0 0 chr20 41789568 41789594 -24878411 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3493 184 223 19 chr20 41789594 41790001 -24878004 - L1MDa LINE L1 -4865 1675 934 609 299 51 5 chr20 41790005 41790202 -24877803 - MLT1H LTR MaLR -324 225 20 1324 204 81 68 chr20 41790837 41791236 -24876769 + MER66A LTR ERV1 97 478 0 393 22 0 0 chr20 41791629 41791675 -24876330 + (TTCC)n Simple_repeat Simple_repeat 3 48 0 2246 91 3 0 chr20 41791675 41791961 -24876044 - AluSg SINE Alu -23 287 1 468 258 65 5 chr20 41792178 41792319 -24875686 - L1ME LINE L1 -435 5686 5540 321 311 160 0 chr20 41793222 41793341 -24874664 - MIR SINE MIR -96 166 29 349 307 121 19 chr20 41793439 41793654 -24874351 + L3 LINE CR1 1190 1426 -151 243 185 12 111 chr20 41793710 41793791 -24874214 + L2 LINE L2 2977 3049 -223 * 373 278 87 0 chr20 41793786 41793901 -24874104 - L2 LINE L2 -3 3269 3145 1479 263 20 30 chr20 41794105 41794500 -24873505 + LTR16C LTR ERVL 101 491 0 205 298 77 29 chr20 41794759 41794863 -24873142 + L2 LINE L2 3134 3242 -30 527 308 66 30 chr20 41795187 41795543 -24872462 + LTR16C LTR ERVL 97 491 0 397 311 53 8 chr20 41795548 41795680 -24872325 - MIR SINE MIR -120 142 5 252 345 60 17 chr20 41795720 41795836 -24872169 - L2 LINE L2 -9 3263 3143 1648 236 11 8 chr20 41796835 41797186 -24870819 + LTR16C LTR ERVL 140 491 0 2246 102 0 0 chr20 41797302 41797597 -24870408 - AluY SINE Alu -16 295 1 596 272 65 75 chr20 41798072 41798351 -24869654 + Charlie8 DNA MER1_type 1 276 -2141 310 250 0 15 chr20 41800678 41800746 -24867259 + MLT1K LTR MaLR 325 391 -197 525 144 0 31 chr20 41800776 41800873 -24867132 + MLT1K LTR MaLR 487 580 -8 546 126 0 0 chr20 41801560 41801675 -24866330 + (TCCA)n Simple_repeat Simple_repeat 1 115 0 212 225 0 0 chr20 41801709 41801749 -24866256 - L2 LINE L2 -16 3256 3217 2659 92 30 14 chr20 41802197 41802566 -24865439 + THE1C LTR MaLR 1 375 0 3991 247 60 58 chr20 41803063 41804527 -24863478 + L2 LINE L2 1825 3300 -13 345 282 46 23 chr20 41804630 41804761 -24863244 + MIR SINE MIR 102 235 -27 405 342 15 10 chr20 41805057 41805259 -24862746 - L1ME LINE L1 -351 5770 5568 2299 107 0 0 chr20 41805332 41805630 -24862375 + AluSx SINE Alu 1 298 -14 699 110 0 0 chr20 41805644 41805735 -24862270 + AluS SINE Alu 10 100 -213 372 167 158 9 chr20 41805739 41805792 -24862213 + Charlie5 DNA MER1_type 2494 2538 -86 1734 98 33 0 chr20 41805792 41806037 -24861968 + L1PB2 LINE L1 5891 6143 -8 372 167 158 9 chr20 41806037 41806097 -24861908 + Charlie5 DNA MER1_type 2538 2624 0 312 215 308 0 chr20 41806127 41806257 -24861748 - MIR SINE MIR -1 261 92 196 323 115 10 chr20 41806322 41806418 -24861587 + L3 LINE CR1 1161 1266 -311 2460 75 0 0 chr20 41806434 41806728 -24861277 + AluSg SINE Alu 17 310 0 205 313 30 0 chr20 41806731 41806798 -24861207 + L3 LINE CR1 1254 1322 -255 300 333 0 0 chr20 41806798 41806903 -24861102 + L2 LINE L2 2225 2329 -985 743 99 33 33 chr20 41806903 41807024 -24860981 - L1PA11 LINE L1 -1 6173 6053 437 93 7 0 chr20 41807024 41807089 -24860916 + L1PA11 LINE L1 5824 5890 -261 204 380 25 19 chr20 41807089 41807247 -24860758 + L2 LINE L2 2337 2495 -819 1421 258 83 41 chr20 41807296 41807846 -24860159 - MLT1F1 LTR MaLR 0 567 1 217 360 63 0 chr20 41807925 41808036 -24859969 + L2 LINE L2 2554 2671 -643 593 278 64 6 chr20 41808651 41808824 -24859181 + MIR SINE MIR 1 183 -79 664 320 13 4 chr20 41809009 41809240 -24858765 + L3 LINE CR1 1330 1562 -15 203 252 19 84 chr20 41810366 41810473 -24857532 + MIR SINE MIR 102 201 -61 282 287 26 113 chr20 41810589 41810645 -24857360 - MIR SINE MIR -65 197 138 1924 157 0 10 chr20 41810645 41810944 -24857061 - AluJb SINE Alu -16 296 1 282 287 26 113 chr20 41810944 41810976 -24857029 - MIR SINE MIR -124 138 105 722 196 0 0 chr20 41810976 41811088 -24856917 + MER81 DNA DNA 1 112 -2 282 287 26 113 chr20 41811088 41811193 -24856812 - MIR SINE MIR -157 105 20 215 286 125 9 chr20 41811489 41811601 -24856404 - MER5A DNA MER1_type -2 187 63 216 362 20 0 chr20 41811673 41811825 -24856180 + L2 LINE L2 2725 2879 -435 2569 136 23 77 chr20 41812019 41812497 -24855508 + LTR32 LTR ERVL 20 471 0 259 239 0 0 chr20 41812545 41812591 -24855414 + L2 LINE L2 3136 3181 -91 354 196 239 0 chr20 41813064 41813156 -24854849 + L2 LINE L2 3198 3311 -2 344 288 55 6 chr20 41813864 41814079 -24853926 + (TG)n Simple_repeat Simple_repeat 1 225 0 482 253 37 12 chr20 41814103 41814265 -24853740 + (TG)n Simple_repeat Simple_repeat 1 166 0 221 244 0 0 chr20 41814775 41814820 -24853185 + GA-rich Low_complexity Low_complexity 5 49 0 189 0 0 0 chr20 41815164 41815185 -24852820 + (T)n Simple_repeat Simple_repeat 1 21 0 428 167 52 126 chr20 41816604 41816778 -24851227 - MLT1H LTR MaLR -385 164 4 186 374 0 0 chr20 41816921 41817004 -24851001 + MIR SINE MIR 72 154 -108 790 332 24 0 chr20 41818118 41818371 -24849634 + MIR SINE MIR 4 262 0 288 250 156 0 chr20 41818474 41818570 -24849435 + MIR SINE MIR 33 143 -119 517 323 44 8 chr20 41818961 41819212 -24848793 - L2 LINE L2 -558 2756 2497 318 260 39 0 chr20 41819232 41819309 -24848696 - L2 LINE L2 -49 3264 3185 181 235 148 37 chr20 41819297 41819378 -24848627 - L2 LINE L2 -806 2508 2419 * 884 175 10 121 chr20 41820723 41820867 -24847138 + MER5A DNA MER1_type 1 117 -72 1816 112 93 11 chr20 41820867 41821135 -24846870 - AluSx SINE Alu -20 292 3 884 175 10 121 chr20 41821135 41821196 -24846809 + MER5A DNA MER1_type 117 183 -6 491 269 156 0 chr20 41821212 41821372 -24846633 + MER5A DNA MER1_type 4 188 -1 1024 168 6 0 chr20 41821577 41821738 -24846267 - FRAM SINE Alu -22 154 1 198 189 0 0 chr20 41821738 41821775 -24846230 - MIR SINE MIR -70 192 156 23 0 0 0 chr20 41822164 41822187 -24845818 + AT_rich Low_complexity Low_complexity 1 23 0 384 300 0 0 chr20 41822410 41822510 -24845495 - MIR SINE MIR -140 122 23 402 290 97 0 chr20 41823038 41823162 -24844843 + MIR SINE MIR 127 262 0 195 94 170 57 chr20 41823265 41823318 -24844687 + L2 LINE L2 3255 3313 0 969 284 77 52 chr20 41824071 41824553 -24843452 + LTR33 LTR ERVL 28 521 0 483 197 53 23 chr20 41824646 41824778 -24843227 - LTR67 LTR ERVL -12 545 410 325 333 30 18 chr20 41824804 41824972 -24843033 - LTR67 LTR ERVL -295 262 93 307 273 71 0 chr20 41826419 41826518 -24841487 - L1ME LINE L1 -422 5699 5594 27 29 0 0 chr20 41826518 41826552 -24841453 + AT_rich Low_complexity Low_complexity 1 34 0 493 273 71 40 chr20 41826563 41826901 -24841104 - L1ME LINE L1 -504 5617 5255 206 23 93 0 chr20 41827002 41827045 -24840960 + (TA)n Simple_repeat Simple_repeat 2 48 0 2128 97 0 11 chr20 41827045 41827323 -24840682 - AluSq SINE Alu -27 286 12 242 156 0 0 chr20 41827448 41827493 -24840512 - LTR66 LTR ERVL -172 438 394 243 247 0 72 chr20 41827503 41827600 -24840405 - L1MC4 LINE L1 -1339 6703 6614 211 200 40 0 chr20 41827601 41827651 -24840354 + (TA)n Simple_repeat Simple_repeat 1 52 0 794 188 10 37 chr20 41827677 41827755 -24840250 + MER8 DNA MER2_type 3 82 -157 3012 126 14 0 chr20 41827755 41828183 -24839822 - MER57B LTR ERV1 0 434 1 794 188 10 37 chr20 41828183 41828300 -24839705 + MER8 DNA MER2_type 82 239 0 474 289 107 83 chr20 41828314 41829183 -24838822 - L1ME LINE L1 -1104 5042 4153 1614 226 195 2 chr20 41830451 41830881 -24837124 - MLT1H LTR MaLR 0 549 37 181 304 0 0 chr20 41831076 41831122 -24836883 + L2 LINE L2 3264 3309 -4 36 0 0 0 chr20 41831264 41831300 -24836705 + AT_rich Low_complexity Low_complexity 1 36 0 273 316 33 46 chr20 41831306 41831458 -24836547 - L1ME3A LINE L1 -59 6180 6031 531 220 127 6 chr20 41831514 41831687 -24836318 - L1ME3A LINE L1 -208 6031 5838 1110 246 53 64 chr20 41831817 41832149 -24835856 - L1ME3A LINE L1 -419 5812 5478 2339 95 3 0 chr20 41832149 41832445 -24835560 - AluSg SINE Alu -7 303 7 1110 246 53 64 chr20 41832445 41832738 -24835267 - L1ME3A LINE L1 -753 5478 5139 996 251 36 37 chr20 41832757 41833207 -24834798 - L1ME3A LINE L1 -2983 3232 2762 356 301 102 45 chr20 41833287 41833622 -24834383 - L1ME3A LINE L1 -3735 2480 2169 366 261 87 63 chr20 41834224 41834431 -24833574 - HAL1b LINE L1 -1068 280 69 366 287 0 37 chr20 41834768 41834876 -24833129 - L2 LINE L2 0 3313 3210 4285 166 17 3 chr20 41834899 41835592 -24832413 - L1MB2 LINE L1 -11 6160 5458 189 107 0 0 chr20 41836789 41836817 -24831188 + (T)n Simple_repeat Simple_repeat 1 28 0 230 56 0 0 chr20 41837018 41837054 -24830951 - L1PA6 LINE L1 -1 6153 6118 * 2226 42 0 0 chr20 41837052 41837314 -24830691 + L1PA5 LINE L1 5863 6124 -30 428 126 19 29 chr20 41837439 41837542 -24830463 + GA-rich Low_complexity Low_complexity 6 107 0 1075 182 13 9 chr20 41837659 41837893 -24830112 + CT-rich Low_complexity Low_complexity 1 417 -34 1075 112 11 6 chr20 41837893 41838072 -24829933 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1075 182 13 9 chr20 41838072 41838108 -24829897 + CT-rich Low_complexity Low_complexity 417 451 0 277 197 15 15 chr20 41838110 41838176 -24829829 + MLT1K LTR MaLR 518 583 -5 10122 111 13 30 chr20 41838605 41840149 -24827856 - Tigger1 DNA MER2_type -3 2415 898 1547 149 0 4 chr20 41840150 41840392 -24827613 + AluSg/x SINE Alu 70 310 0 862 225 100 105 chr20 41840540 41841110 -24826895 + MLT1F1 LTR MaLR 1 567 0 366 364 92 33 chr20 41842125 41842584 -24825421 + L2 LINE L2 2827 3312 -1 208 242 45 15 chr20 41843939 41844005 -24824000 + MIR SINE MIR 109 176 -86 195 239 136 23 chr20 41844021 41844109 -24823896 - L2 LINE L2 -8 3305 3208 249 33 0 0 chr20 41844174 41844204 -24823801 + (TA)n Simple_repeat Simple_repeat 2 31 0 257 200 0 0 chr20 41844336 41844391 -24823614 - MIR SINE MIR -109 153 99 335 247 75 89 chr20 41845654 41845800 -24822205 - L2 LINE L2 -1 3312 3169 2128 150 0 0 chr20 41845803 41846109 -24821896 + AluSx SINE Alu 1 306 -6 335 213 27 0 chr20 41846552 41846627 -24821378 + MER116 DNA Mariner 4 80 0 758 169 0 27 chr20 41846721 41846869 -24821136 + L1MB8 LINE L1 6035 6178 0 273 224 53 0 chr20 41846989 41847065 -24820940 - MIR SINE MIR -75 133 54 952 274 62 41 chr20 41847640 41848107 -24819898 + L2 LINE L2 2791 3267 -46 2837 191 99 10 chr20 41848138 41848745 -24819260 - L1MB7 LINE L1 0 6184 5524 993 279 94 28 chr20 41849277 41849735 -24818270 + LTR16C LTR ERVL 4 491 0 2251 147 113 21 chr20 41850015 41850404 -24817601 - MSTB LTR MaLR -1 425 1 6424 196 16 6 chr20 41850405 41851578 -24816427 - MSTB-int LTR MaLR -1 1650 466 8797 196 22 2 chr20 41851585 41853187 -24814818 + MSTB-int LTR MaLR 2 1636 -15 1645 162 64 158 chr20 41853214 41853730 -24814275 + MSTB LTR MaLR 4 426 0 848 207 17 0 chr20 41853798 41853972 -24814033 - MER45A DNA AcHobo 0 178 2 241 379 7 0 chr20 41854065 41854205 -24813800 + L2 LINE L2 2624 2764 -550 266 213 307 0 chr20 41854484 41854559 -24813446 + MER58 DNA MER1_type 2 99 -242 492 164 29 48 chr20 41854572 41854676 -24813329 + MER58 DNA MER1_type 2319 2420 0 380 128 101 110 chr20 41854762 41854871 -24813134 - MER94 DNA DNA -26 108 1 343 209 76 9 chr20 41855805 41855910 -24812095 - L2 LINE L2 -187 3126 3015 316 273 141 0 chr20 41856473 41856572 -24811433 + L2 LINE L2 3188 3300 -13 222 37 0 0 chr20 41856572 41856599 -24811406 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 687 278 69 52 chr20 41856802 41857166 -24810839 + MLT1I LTR MaLR 40 409 0 375 330 145 31 chr20 41857663 41858014 -24809991 - L1MC4a LINE L1 -1869 5939 5549 2068 118 16 10 chr20 41859077 41859382 -24808623 + AluSq SINE Alu 1 307 -6 518 273 0 37 chr20 41859433 41859594 -24808411 - MIR SINE MIR -44 218 64 202 340 0 19 chr20 41859610 41859716 -24808289 + (CATATA)n Simple_repeat Simple_repeat 1 104 0 1354 260 135 0 chr20 41860649 41861034 -24806971 + LTR16C LTR ERVL 55 491 0 518 321 70 9 chr20 41861158 41861373 -24806632 + MIR SINE MIR 20 247 -15 309 302 17 26 chr20 41861746 41861862 -24806143 - MER5A DNA MER1_type -22 167 53 480 184 73 9 chr20 41861955 41862064 -24805941 + MIR SINE MIR 101 216 -46 207 301 54 21 chr20 41862253 41862346 -24805659 + L2 LINE L2 3173 3268 -4 945 80 58 0 chr20 41863156 41863293 -24804712 + L1PA7 LINE L1 6009 6153 -1 268 233 0 27 chr20 41863296 41863369 -24804636 - L1ME4a LINE L1 -66 6055 5985 202 214 14 14 chr20 41863432 41863502 -24804503 + (TA)n Simple_repeat Simple_repeat 2 71 0 22 35 0 0 chr20 41863523 41863552 -24804453 + AT_rich Low_complexity Low_complexity 1 29 0 392 228 48 12 chr20 41863651 41863818 -24804187 + (TA)n Simple_repeat Simple_repeat 2 174 0 273 230 24 12 chr20 41863883 41864048 -24803957 + (TA)n Simple_repeat Simple_repeat 1 167 0 450 240 30 33 chr20 41864584 41864784 -24803221 - L1ME4a LINE L1 -241 5880 5683 302 316 43 43 chr20 41865086 41865295 -24802710 - L1ME4a LINE L1 -1438 4708 4500 2274 141 57 24 chr20 41865461 41865615 -24802390 - L1MA9 LINE L1 -32 6280 6133 2302 117 0 0 chr20 41865615 41865922 -24802083 - AluSx SINE Alu -5 307 1 2274 141 57 24 chr20 41865922 41865979 -24802026 - L1MA9 LINE L1 -179 6133 6079 1812 164 20 13 chr20 41865979 41866283 -24801722 - AluJo SINE Alu -6 306 1 2274 141 57 24 chr20 41866283 41866489 -24801516 - L1MA9 LINE L1 -233 6079 5848 2123 140 53 36 chr20 41866540 41866714 -24801291 - L1MA4 LINE L1 -6 6294 6124 192 40 0 0 chr20 41866714 41866739 -24801266 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 2123 140 53 36 chr20 41866739 41866978 -24801027 - L1MA4 LINE L1 -176 6124 5874 318 270 131 15 chr20 41866980 41867117 -24800888 - L1ME LINE L1 -454 5667 5515 260 130 0 0 chr20 41867120 41867166 -24800839 + L1MB5 LINE L1 4352 4397 -1749 4197 163 7 12 chr20 41867167 41867910 -24800095 + L1MB5 LINE L1 5428 6166 -8 180 97 0 0 chr20 41867920 41867951 -24800054 + (CCAA)n Simple_repeat Simple_repeat 2 32 0 254 193 133 12 chr20 41868231 41868314 -24799691 - L1ME LINE L1 -2336 5472 5380 736 318 68 42 chr20 41868457 41869079 -24798926 - L1MEd LINE L1 -5470 649 12 268 338 46 44 chr20 41869113 41869501 -24798504 - L1ME LINE L1 -887 5259 4871 438 294 58 34 chr20 41870345 41870671 -24797334 - L2 LINE L2 0 3313 2980 305 216 85 85 chr20 41870686 41870839 -24797166 - L2 LINE L2 -508 2806 2654 228 241 17 0 chr20 41871235 41871293 -24796712 + MLT1H1 LTR MaLR 496 554 -1 340 260 41 118 chr20 41871322 41871686 -24796319 + MLT1I LTR MaLR 59 545 -4 345 282 51 0 chr20 41871694 41871811 -24796194 - MIR SINE MIR -98 164 42 228 298 123 26 chr20 41872307 41872421 -24795584 + MIR SINE MIR 20 144 -118 284 274 57 34 chr20 41872726 41872872 -24795133 + MIR SINE MIR 14 159 -66 206 292 0 0 chr20 41872868 41872916 -24795089 + L2 LINE L2 3186 3233 -39 * 228 303 0 0 chr20 41873288 41873443 -24794562 + (CAT)n Simple_repeat Simple_repeat 1 155 0 404 311 88 22 chr20 41873473 41873701 -24794304 - MIR SINE MIR -8 254 12 300 319 117 35 chr20 41873745 41874027 -24793978 + L2 LINE L2 3009 3313 0 221 336 0 18 chr20 41874530 41874643 -24793362 + L2 LINE L2 2913 3023 -249 597 239 16 33 chr20 41875597 41875781 -24792224 + MIR SINE MIR 82 262 0 227 329 86 31 chr20 41875858 41876080 -24791925 + L2 LINE L2 2975 3208 -105 194 321 0 19 chr20 41876508 41876561 -24791444 + MIR SINE MIR 74 125 -83 818 298 8 12 chr20 41877296 41877544 -24790461 + MIR SINE MIR 14 260 -2 643 246 32 96 chr20 41877712 41878163 -24789842 + MLT1H LTR MaLR 32 546 -3 2541 147 40 14 chr20 41878192 41878613 -24789392 + MSTB1 LTR MaLR 1 432 0 627 283 38 34 chr20 41879196 41879433 -24788572 + L2 LINE L2 3076 3313 0 560 289 0 6 chr20 41880567 41880723 -24787282 - MIR SINE MIR -60 202 48 1157 275 106 19 chr20 41881009 41881311 -24786694 + LTR33 LTR ERVL 6 365 -156 2476 116 22 0 chr20 41881311 41881666 -24786339 + THE1B LTR MaLR 2 364 0 1157 275 106 19 chr20 41881666 41881836 -24786169 + LTR33 LTR ERVL 365 519 -2 578 267 69 15 chr20 41881968 41882148 -24785857 + MIR SINE MIR 20 214 -48 480 88 25 25 chr20 41882148 41882228 -24785777 - MADE1 DNA Mariner 0 80 1 578 267 69 15 chr20 41882228 41882249 -24785756 + MIR SINE MIR 214 232 -30 2039 133 10 3 chr20 41882700 41882994 -24785011 - AluSq SINE Alu -15 298 3 1097 162 6 0 chr20 41883156 41883329 -24784676 + FRAM SINE Alu 1 174 -2 2233 118 0 0 chr20 41883665 41883970 -24784035 - AluSx SINE Alu -7 305 1 547 294 0 18 chr20 41884649 41884812 -24783193 - MER5B DNA MER1_type -15 163 4 15652 84 6 1 chr20 41884889 41887769 -24780236 - L1PA7 LINE L1 0 6469 3574 4661 123 4 12 chr20 41887769 41888445 -24779560 - L1PA7 LINE L1 -5786 675 5 331 317 16 8 chr20 41888602 41888725 -24779280 + MIR3 SINE MIR 84 207 -1 379 282 23 30 chr20 41889195 41889326 -24778679 + MIR3 SINE MIR 53 182 -26 702 239 89 9 chr20 41889944 41890157 -24777848 + MIR SINE MIR 6 235 -27 250 135 77 0 chr20 41890207 41890311 -24777694 + (TA)n Simple_repeat Simple_repeat 1 112 0 362 234 78 54 chr20 41890533 41890700 -24777305 + L2 LINE L2 2253 2423 -891 8451 51 1 0 chr20 41890700 41891665 -24776340 + LTR5 LTR ERVK 1 966 -3 198 71 0 0 chr20 41891855 41891883 -24776122 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 247 221 0 44 chr20 41891905 41891973 -24776032 - MIR SINE MIR 0 262 198 393 287 67 36 chr20 41892761 41892956 -24775049 + L2 LINE L2 3108 3308 -5 980 211 10 21 chr20 41893086 41893280 -24774725 - MER58A DNA MER1_type -3 221 30 294 313 31 8 chr20 41893294 41893422 -24774583 + L2 LINE L2 3183 3313 0 423 296 157 0 chr20 41893532 41893762 -24774243 + L3 LINE CR1 1034 1299 -278 274 240 168 16 chr20 41893808 41893933 -24774072 + L3 LINE CR1 1419 1562 -15 1422 234 64 38 chr20 41894184 41894653 -24773352 - LTR16C LTR ERVL 0 491 11 290 217 11 54 chr20 41895281 41895373 -24772632 - L2 LINE L2 -76 3237 3150 230 218 0 0 chr20 41896366 41896421 -24771584 + MIR SINE MIR 85 139 -123 446 321 59 27 chr20 41896713 41896934 -24771071 - MIR SINE MIR -7 255 28 372 350 78 0 chr20 41897087 41897267 -24770738 + L2 LINE L2 2156 2349 -965 563 261 147 6 chr20 41897633 41897790 -24770215 + MER5A DNA MER1_type 9 187 -2 283 314 25 8 chr20 41898018 41898136 -24769869 - MIR SINE MIR -110 152 33 1035 172 17 0 chr20 41898199 41898379 -24769626 - MER5A DNA MER1_type -2 187 5 200 333 67 7 chr20 41898486 41898621 -24769384 - MIR SINE MIR -71 191 49 224 271 73 62 chr20 41898654 41898831 -24769174 - MIR3 SINE MIR -25 183 5 226 313 40 30 chr20 41898932 41899031 -24768974 - MIR SINE MIR 0 262 163 241 256 111 11 chr20 41899041 41899131 -24768874 - L2 LINE L2 -49 3223 3125 856 156 0 8 chr20 41899157 41899285 -24768720 + FLAM_C SINE Alu 1 127 -16 210 241 54 54 chr20 41899340 41899452 -24768553 - MIR SINE MIR -55 207 96 314 350 76 25 chr20 41900602 41901048 -24766957 - L2 LINE L2 -479 2835 2367 423 291 0 0 chr20 41901155 41901258 -24766747 - MIR3 SINE MIR -23 185 83 181 136 0 68 chr20 41901866 41901910 -24766095 - L3 LINE CR1 -107 1470 1430 756 302 86 15 chr20 41902222 41902490 -24765515 - MER45C DNA AcHobo -329 624 338 233 304 134 9 chr20 41902495 41902607 -24765398 - L3 LINE CR1 -974 603 478 316 271 206 35 chr20 41902736 41902935 -24765070 + MIR SINE MIR 16 248 -14 305 244 111 11 chr20 41902976 41903066 -24764939 + L2 LINE L2 3125 3223 -49 192 386 10 0 chr20 41903075 41903176 -24764829 + MIR SINE MIR 161 262 0 785 326 59 7 chr20 41903372 41903676 -24764329 - LTR33 LTR ERVL -198 323 4 2771 163 49 20 chr20 41904567 41905057 -24762948 + MLT1D LTR MaLR 2 505 0 391 276 159 21 chr20 41905065 41905086 -24762919 + MER5A DNA MER1_type 9 26 -163 3074 116 120 31 chr20 41905086 41905312 -24762693 + MER1A DNA MER1_type 1 206 -2494 2259 98 3 19 chr20 41905312 41905627 -24762378 + AluSg SINE Alu 1 310 0 3074 116 120 31 chr20 41905627 41905884 -24762121 + MER1A DNA MER1_type 206 527 0 391 276 159 21 chr20 41905884 41906007 -24761998 + MER5A DNA MER1_type 26 173 -16 21 36 0 0 chr20 41906197 41906225 -24761780 + AT_rich Low_complexity Low_complexity 1 28 0 904 251 40 14 chr20 41907597 41907820 -24760185 + L1ME1 LINE L1 5885 6113 -53 732 291 34 29 chr20 41908258 41908667 -24759338 + L1M4 LINE L1 4194 4604 -1542 280 300 100 50 chr20 41908727 41908967 -24759038 - L2 LINE L2 -441 2873 2622 269 241 0 0 chr20 41909037 41909095 -24758910 + C-rich Low_complexity Low_complexity 1 58 0 2079 119 0 14 chr20 41909265 41909592 -24758413 - AluSx SINE Alu 0 323 1 21 0 0 0 chr20 41909650 41909671 -24758334 + AT_rich Low_complexity Low_complexity 1 21 0 203 167 0 0 chr20 41909671 41909713 -24758292 + T-rich Low_complexity Low_complexity 2 43 0 436 243 221 0 chr20 41910339 41910479 -24757526 - MIR SINE MIR -6 256 86 1472 192 28 92 chr20 41912162 41912552 -24755453 - MLT1A1 LTR MaLR 0 365 1 611 252 150 60 chr20 41913373 41913687 -24754318 - LTR33A LTR ERVL -175 348 7 180 0 0 0 chr20 41914305 41914325 -24753680 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 25 31 0 0 chr20 41914556 41914588 -24753417 + AT_rich Low_complexity Low_complexity 1 32 0 606 210 48 0 chr20 41914605 41914729 -24753276 - L1 LINE L1 -1285 5563 5434 * 6537 203 34 27 chr20 41914703 41916072 -24751933 - L1 LINE L1 -2348 4500 3117 297 0 0 0 chr20 41916072 41916105 -24751900 + (TG)n Simple_repeat Simple_repeat 2 34 0 6537 203 34 27 chr20 41916105 41916347 -24751658 - L1 LINE L1 -3731 3117 2878 191 194 0 0 chr20 41917516 41917552 -24750453 + L2 LINE L2 1373 1408 -1906 213 200 0 47 chr20 41917764 41917849 -24750156 + CT-rich Low_complexity Low_complexity 2 82 0 21 36 0 0 chr20 41919215 41919243 -24748762 + GC_rich Low_complexity Low_complexity 1 28 0 11934 217 26 41 chr20 41919244 41922187 -24745818 - L1 LINE L1 -3948 2900 1 529 283 68 34 chr20 41922241 41922566 -24745439 + L1M4 LINE L1 3085 3420 -2726 537 285 49 8 chr20 41922654 41922860 -24745145 + MIR SINE MIR 50 259 -3 284 341 41 0 chr20 41923061 41923184 -24744821 + L1M4 LINE L1 3713 3840 -2306 251 352 107 25 chr20 41923203 41923399 -24744606 - MIR SINE MIR -49 213 2 597 311 107 49 chr20 41923426 41923876 -24744129 + L1M4 LINE L1 3919 4420 -1726 2366 80 7 0 chr20 41923876 41924175 -24743830 - AluSg SINE Alu -9 301 1 597 311 107 49 chr20 41924175 41924376 -24743629 + L1M4 LINE L1 4420 4608 -1538 234 284 46 28 chr20 41924932 41925041 -24742964 - LTR16A1 LTR ERVL -6 451 341 708 203 157 42 chr20 41925096 41925313 -24742692 - LTR16A1 LTR ERVL -215 242 1 320 239 78 56 chr20 41925362 41925504 -24742501 + L1ME4a LINE L1 5928 6072 -49 338 219 66 39 chr20 41925581 41925688 -24742317 + MIR SINE MIR 50 161 -47 295 203 43 0 chr20 41926119 41926188 -24741817 + MLT1K LTR MaLR 517 588 0 202 245 20 0 chr20 41926399 41926448 -24741557 - MIR3 SINE MIR -9 199 150 269 216 204 23 chr20 41927407 41927499 -24740506 + MIR SINE MIR 16 121 -87 939 206 6 12 chr20 41927867 41928032 -24739973 + FRAM SINE Alu 2 165 -1 387 0 0 0 chr20 41928187 41928230 -24739775 + (CA)n Simple_repeat Simple_repeat 2 44 0 306 292 123 13 chr20 41928609 41928763 -24739242 - L1MC/D LINE L1 -2016 5792 5622 2858 101 8 8 chr20 41928779 41929154 -24738851 - THE1C LTR MaLR 0 375 1 10137 92 50 88 chr20 41929154 41930796 -24737209 - THE1C-int LTR MaLR 0 1580 1 261 288 55 36 chr20 41930942 41931161 -24736844 - L1M4 LINE L1 -3711 2435 2213 22 0 0 0 chr20 41931872 41931894 -24736111 + AT_rich Low_complexity Low_complexity 1 22 0 255 303 148 21 chr20 41932615 41932757 -24735248 + L3 LINE CR1 832 991 -586 466 308 103 6 chr20 41932857 41933013 -24734992 - MER5B DNA MER1_type 0 178 8 480 261 40 10 chr20 41933112 41933293 -24734712 + MIR SINE MIR 5 146 -62 2330 82 3 29 chr20 41934095 41934411 -24733594 - AluY SINE Alu -2 309 2 362 273 55 18 chr20 41934913 41935023 -24732982 - MIR SINE MIR -75 187 74 327 351 27 0 chr20 41935417 41935528 -24732477 - L2 LINE L2 -1 3271 3158 258 256 189 0 chr20 41935951 41936041 -24731964 - MLT1J2 LTR MaLR -242 208 102 263 295 191 0 chr20 41936041 41936214 -24731791 - LTR16C LTR ERVL 0 491 286 2253 104 3 10 chr20 41936369 41936677 -24731328 + AluSx SINE Alu 2 307 -5 364 247 0 34 chr20 41936781 41936870 -24731135 - MLT1J2 LTR MaLR -342 108 23 242 257 212 38 chr20 41937239 41937458 -24730547 + L2 LINE L2 2788 3034 -238 519 17 0 0 chr20 41937775 41937835 -24730170 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 1084 224 28 28 chr20 41938528 41938778 -24729227 + MIR SINE MIR 12 261 -1 266 265 72 0 chr20 41938791 41938874 -24729131 - MIR SINE MIR -62 200 112 214 315 150 24 chr20 41938843 41938970 -24729035 - MIR3 SINE MIR -65 143 1 * 346 330 17 0 chr20 41939167 41939285 -24728720 + MIR SINE MIR 22 141 -67 339 277 15 42 chr20 41939285 41939476 -24728529 + L1M4 LINE L1 5618 5800 -370 2164 113 0 20 chr20 41939754 41940055 -24727950 - AluSx SINE Alu -17 295 1 2447 164 111 0 chr20 41941136 41941568 -24726437 + MLT2B2 LTR ERVL 1 480 -35 243 146 0 0 chr20 41941569 41941610 -24726395 + (TG)n Simple_repeat Simple_repeat 2 42 0 250 176 0 20 chr20 41941619 41941670 -24726335 + MLT2B2 LTR ERVL 464 513 -7 455 287 143 14 chr20 41942295 41942504 -24725501 + MIR SINE MIR 21 256 -6 376 300 114 48 chr20 41942635 41942845 -24725160 + L2 LINE L2 3001 3224 -48 594 318 26 0 chr20 41942905 41943097 -24724908 - MIR SINE MIR -55 207 11 291 311 33 0 chr20 41943774 41943864 -24724141 - MLT1H LTR MaLR -3 546 454 315 119 87 6 chr20 41944001 41944077 -24723928 - MLT1I LTR MaLR -268 141 85 351 314 64 32 chr20 41944121 41944291 -24723714 - MIR SINE MIR -58 150 5 1697 118 137 0 chr20 41945141 41945396 -24722609 - AluJb SINE Alu -12 290 1 933 316 84 24 chr20 41945568 41946093 -24721912 - L2 LINE L2 0 3313 2766 839 283 49 0 chr20 41946149 41946435 -24721570 - LTR16C LTR ERVL 0 491 192 227 260 0 27 chr20 41946469 41946542 -24721463 - LTR16C LTR ERVL -385 106 36 444 323 0 0 chr20 41947249 41947382 -24720623 - MIR SINE MIR -65 197 65 1127 187 94 0 chr20 41947631 41947834 -24720171 - MER58A DNA MER1_type -2 222 1 272 70 23 0 chr20 41948040 41948083 -24719922 + (CA)n Simple_repeat Simple_repeat 2 45 0 614 221 60 101 chr20 41948133 41948350 -24719655 + MER63A DNA MER1_type 3 210 0 920 324 59 5 chr20 41949690 41950082 -24717923 + LTR16B LTR ERVL 52 464 0 2456 177 28 9 chr20 41950206 41950629 -24717376 - MSTB1 LTR MaLR 0 432 2 191 323 81 0 chr20 41950944 41951006 -24716999 - L2 LINE L2 -42 3230 3164 410 277 72 10 chr20 41951415 41951552 -24716453 + MIR3 SINE MIR 13 158 -66 862 209 129 0 chr20 41951701 41951902 -24716103 - MIR SINE MIR -29 233 7 1099 233 67 96 chr20 41952363 41952883 -24715122 + MLT1F1 LTR MaLR 3 572 -54 539 297 86 17 chr20 41953397 41953629 -24714376 + MIR SINE MIR 15 262 0 1556 220 90 11 chr20 41953813 41954167 -24713838 - MLT1E LTR MaLR 0 593 212 210 236 0 0 chr20 41954177 41954232 -24713773 + GA-rich Low_complexity Low_complexity 2 56 0 297 306 174 0 chr20 41955463 41955561 -24712444 + L2 LINE L2 3142 3256 -16 891 259 133 7 chr20 41955710 41956004 -24712001 - LTR16C LTR ERVL 0 491 161 631 257 188 9 chr20 41956134 41956352 -24711653 - MIR SINE MIR -4 258 2 291 274 179 0 chr20 41957751 41957857 -24710148 - MIR SINE MIR 0 262 138 502 272 89 34 chr20 41957915 41958122 -24709883 - MIR SINE MIR 0 262 46 424 324 128 0 chr20 41958374 41958522 -24709483 + MIR SINE MIR 38 204 -58 28 0 0 0 chr20 41958985 41959013 -24708992 + AT_rich Low_complexity Low_complexity 1 28 0 2696 153 47 12 chr20 41959014 41959505 -24708500 - L1MA8 LINE L1 -2 6289 5782 2460 118 46 10 chr20 41959603 41959994 -24708011 - L1MA8 LINE L1 -485 5806 5402 763 269 84 0 chr20 41961390 41961617 -24706388 + MIR SINE MIR 17 262 0 348 311 56 22 chr20 41962911 41963091 -24704914 + MER5A DNA MER1_type 4 189 0 222 125 0 0 chr20 41963093 41963125 -24704880 + L2 LINE L2 3191 3222 -91 831 291 23 77 chr20 41963162 41963554 -24704451 + MLT1I LTR MaLR 39 409 0 258 289 95 68 chr20 41963803 41963993 -24704012 - L2 LINE L2 -2 3270 3076 331 327 0 10 chr20 41964425 41964529 -24703476 - MIR SINE MIR -6 256 154 2046 204 40 50 chr20 41964533 41965037 -24702968 - MLT1D LTR MaLR -4 501 3 371 229 193 0 chr20 41965480 41965589 -24702416 - MIR SINE MIR -104 158 29 234 81 0 0 chr20 41966578 41966615 -24701390 + (TG)n Simple_repeat Simple_repeat 2 38 0 1778 263 57 30 chr20 41968097 41968613 -24699392 + MLT1G LTR MaLR 10 545 -45 1888 102 11 4 chr20 41968613 41968916 -24699089 - AluSq SINE Alu 0 313 9 1778 263 57 30 chr20 41968916 41968964 -24699041 + MLT1G LTR MaLR 545 590 0 294 266 125 31 chr20 41969409 41969537 -24698468 - MER5A DNA MER1_type 0 189 50 730 205 21 8 chr20 41970100 41970294 -24697711 - MIR SINE MIR -10 252 8 269 304 208 32 chr20 41970319 41970444 -24697561 + L2 LINE L2 3126 3272 0 545 218 32 0 chr20 41971108 41971232 -24696773 - LTR16C LTR ERVL 0 491 364 899 232 101 0 chr20 41972715 41972913 -24695092 - MER58A DNA MER1_type 0 224 7 405 276 18 8 chr20 41972969 41973091 -24694914 - MER5A DNA MER1_type -39 150 17 198 359 13 0 chr20 41973581 41973659 -24694346 - L2 LINE L2 -8 3264 3186 228 220 0 20 chr20 41974267 41974317 -24693688 - MIR3 SINE MIR -6 202 154 1011 9 0 0 chr20 41974788 41974901 -24693104 + L1PA2 LINE L1 6040 6152 -3 245 284 11 74 chr20 41976279 41976374 -24691631 - L2 LINE L2 0 3272 3184 374 252 139 0 chr20 41976523 41976638 -24691367 + MER94 DNA DNA 1 131 -3 1558 179 36 0 chr20 41977390 41977670 -24690335 - AluJo SINE Alu -9 303 14 385 287 134 6 chr20 41978747 41978904 -24689101 + MER5B DNA MER1_type 2 178 0 374 239 134 22 chr20 41978904 41979014 -24688991 - MIR3 SINE MIR -46 162 38 303 153 28 28 chr20 41979302 41979374 -24688631 + MER116 DNA Mariner 1 72 -8 184 253 165 51 chr20 41979696 41979775 -24688230 + MIR3 SINE MIR 91 178 -30 321 304 72 50 chr20 41979805 41980031 -24687974 - MIR SINE MIR 0 262 33 2186 110 53 31 chr20 41980233 41980589 -24687416 + THE1B LTR MaLR 1 364 0 777 257 71 0 chr20 41980695 41980878 -24687127 + MIR SINE MIR 2 197 -65 277 236 143 37 chr20 41980888 41981049 -24686956 - MLT1I LTR MaLR 0 409 277 236 311 70 44 chr20 41984042 41984312 -24683693 - L1P LINE L1 -1488 4658 4382 269 230 0 35 chr20 41984394 41984481 -24683524 - L1 LINE L1 -1807 4339 4256 1128 251 96 51 chr20 41984542 41985076 -24682929 + MLT1H1 LTR MaLR 1 555 0 549 301 25 93 chr20 41985236 41985632 -24682373 - MLT1I LTR MaLR -39 370 2 244 200 85 46 chr20 41985676 41985806 -24682199 - L1 LINE L1 -2177 3969 3835 2305 79 3 10 chr20 41985842 41986146 -24681859 - AluSq SINE Alu -11 302 1 337 357 77 48 chr20 41986206 41986542 -24681463 - L1 LINE L1 -2402 3744 3399 344 276 126 86 chr20 41989375 41989549 -24678456 - L1ME4a LINE L1 -5 6116 5936 244 272 238 8 chr20 41990389 41990624 -24677381 + L1ME4a LINE L1 5822 6110 -11 303 321 157 13 chr20 41991233 41991392 -24676613 - MER5A DNA MER1_type 0 189 8 1609 187 3 7 chr20 41991449 41991762 -24676243 - AluJb SINE Alu 0 312 1 494 252 160 82 chr20 41991783 41992207 -24675798 + MLT1H LTR MaLR 45 549 0 359 182 141 121 chr20 41992233 41992332 -24675673 - MER5A DNA MER1_type -75 103 3 283 263 140 31 chr20 41992341 41992471 -24675534 + MIR SINE MIR 61 207 -55 581 315 38 5 chr20 41996749 41996962 -24671043 + MIR SINE MIR 6 225 -37 210 260 48 103 chr20 41997411 41997558 -24670447 + MIR SINE MIR 55 192 -70 201 329 143 24 chr20 41998458 41998668 -24669337 + L2 LINE L2 2811 3045 -227 344 286 13 91 chr20 41999238 41999392 -24668613 + MIR SINE MIR 115 256 -6 202 231 15 31 chr20 42000739 42000804 -24667201 + GA-rich Low_complexity Low_complexity 4 67 0 682 236 147 0 chr20 42000987 42001144 -24666861 - MER5A DNA MER1_type 0 189 10 233 176 78 0 chr20 42001939 42001990 -24666015 + tRNA-Arg-AGG tRNA tRNA 14 68 -8 611 230 22 7 chr20 42001990 42002125 -24665880 + MIR3 SINE MIR 69 205 -3 280 313 15 60 chr20 42003820 42003954 -24664051 - MIR3 SINE MIR -18 190 73 367 347 24 18 chr20 42004795 42004962 -24663043 + L2 LINE L2 2922 3089 -183 2156 135 30 0 chr20 42005739 42006043 -24661962 - AluSq SINE Alu 0 313 1 359 245 173 22 chr20 42006188 42006327 -24661678 + MIR SINE MIR 48 207 -55 888 39 0 0 chr20 42006455 42006559 -24661446 + AluY SINE Alu 206 309 -2 274 228 250 11 chr20 42006583 42006675 -24661330 + MIR SINE MIR 40 153 -109 954 203 63 10 chr20 42006808 42007015 -24660990 + MER20 DNA MER1_type 1 218 -1 1927 123 0 63 chr20 42007023 42007351 -24660654 - AluSc SINE Alu 0 309 1 2325 114 3 0 chr20 42007398 42007705 -24660300 + AluSg SINE Alu 1 308 -2 1199 225 5 0 chr20 42008385 42008607 -24659398 + MER58A DNA MER1_type 1 223 -1 369 248 10 30 chr20 42008607 42008708 -24659297 + MIR SINE MIR 161 259 -3 255 31 0 0 chr20 42008906 42008938 -24659067 + (TG)n Simple_repeat Simple_repeat 2 33 0 237 301 14 14 chr20 42009831 42009904 -24658101 + MIR SINE MIR 41 113 -149 254 148 19 0 chr20 42011574 42011628 -24656377 + GA-rich Low_complexity Low_complexity 2 56 0 389 344 33 7 chr20 42012213 42012364 -24655641 - MIR3 SINE MIR -21 187 33 377 186 0 19 chr20 42012824 42012904 -24655101 - MLT1D LTR MaLR -436 69 1 181 213 164 0 chr20 42014174 42014235 -24653770 + L2 LINE L2 2403 2473 -841 1446 151 7 99 chr20 42014235 42014412 -24653593 - AluJb SINE Alu -19 293 154 2040 120 28 0 chr20 42014412 42014696 -24653309 + AluSx SINE Alu 1 292 -20 1446 151 7 99 chr20 42014696 42014822 -24653183 - AluJb SINE Alu -158 154 18 1168 268 101 65 chr20 42014828 42015665 -24652340 + L2 LINE L2 2462 3313 0 1448 138 93 90 chr20 42016080 42016125 -24651880 - AluJo SINE Alu 0 312 269 2014 131 10 3 chr20 42016125 42016415 -24651590 + AluSx SINE Alu 1 292 -20 1448 138 93 90 chr20 42016415 42016680 -24651325 - AluJo SINE Alu -43 269 1 413 278 48 72 chr20 42017002 42017363 -24650642 + L2 LINE L2 2771 3121 -151 258 220 0 0 chr20 42018950 42019009 -24648996 + (TTCA)n Simple_repeat Simple_repeat 1 59 0 183 307 102 44 chr20 42019055 42019192 -24648813 + MIR SINE MIR 94 238 -24 194 245 132 0 chr20 42019295 42019348 -24648657 - MIR3 SINE MIR -52 156 97 296 243 43 79 chr20 42019769 42019909 -24648096 + MIR SINE MIR 20 154 -108 223 254 18 0 chr20 42020510 42020565 -24647440 + (CA)n Simple_repeat Simple_repeat 1 56 0 445 304 53 0 chr20 42021027 42021198 -24646807 + MIR3 SINE MIR 4 183 -25 198 176 0 0 chr20 42021435 42021469 -24646536 - L2 LINE L2 -11 3261 3228 185 260 110 27 chr20 42021511 42021584 -24646421 + L2 LINE L2 3156 3234 -38 583 231 150 12 chr20 42023100 42023260 -24644745 - MER5A DNA MER1_type 0 189 8 1704 101 0 13 chr20 42023260 42023488 -24644517 - AluSg/x SINE Alu -2 308 84 730 189 13 20 chr20 42023832 42023985 -24644020 + MLT1A2 LTR MaLR 1 152 -213 924 163 0 0 chr20 42023991 42024132 -24643873 + FLAM_C SINE Alu 1 141 -2 872 251 0 5 chr20 42024153 42024344 -24643661 + MLT1A2 LTR MaLR 183 372 -2 1000 260 47 11 chr20 42024902 42025179 -24642826 + LTR16C LTR ERVL 183 469 -22 262 292 92 49 chr20 42025852 42026037 -24641968 + MIR SINE MIR 64 256 -6 187 296 14 56 chr20 42026167 42026238 -24641767 + L2 LINE L2 3227 3294 -19 292 267 33 22 chr20 42026269 42026359 -24641646 - L3 LINE CR1 -60 1517 1427 235 209 0 0 chr20 42026999 42027042 -24640963 + CT-rich Low_complexity Low_complexity 2 44 0 623 222 31 72 chr20 42028065 42028259 -24639746 + MIR SINE MIR 2 187 -75 266 258 72 21 chr20 42028392 42028489 -24639516 - L2 LINE L2 -8 3305 3204 264 238 69 89 chr20 42028548 42028649 -24639356 - MIR SINE MIR -13 249 151 210 229 181 0 chr20 42028892 42028975 -24639030 + MIR SINE MIR 107 204 -58 306 370 51 14 chr20 42029479 42029617 -24638388 + MIR SINE MIR 101 243 -19 2070 88 0 18 chr20 42029848 42030120 -24637885 - AluSg SINE Alu -9 301 35 390 308 8 0 chr20 42030442 42030559 -24637446 + MER103 DNA DNA 3 120 -46 619 312 58 87 chr20 42031113 42031387 -24636618 - L2 LINE L2 0 3272 2992 816 229 63 32 chr20 42031387 42031640 -24636365 - MIR SINE MIR 0 262 2 619 312 58 87 chr20 42031640 42032027 -24635978 - L2 LINE L2 -280 2992 2637 434 269 14 14 chr20 42032031 42032172 -24635833 + LTR16A1 LTR ERVL 12 152 -305 442 195 0 0 chr20 42032248 42032330 -24635675 + MER81 DNA DNA 17 98 -16 642 255 52 26 chr20 42032361 42032592 -24635413 + LTR16A1 LTR ERVL 217 453 -4 1678 279 16 2 chr20 42033159 42033610 -24634395 + LTR16A1 LTR ERVL 1 457 0 1110 213 14 9 chr20 42033998 42034214 -24633791 + MIR SINE MIR 46 262 0 513 333 78 49 chr20 42034277 42034335 -24633670 + L2 LINE L2 2849 2904 -409 1274 129 9 44 chr20 42034335 42034560 -24633445 - MER20 DNA MER1_type 0 219 3 513 333 78 49 chr20 42034560 42034952 -24633053 + L2 LINE L2 2904 3312 -1 230 0 33 0 chr20 42035133 42035163 -24632842 + (CAGAGA)n Simple_repeat Simple_repeat 2 32 0 381 271 41 41 chr20 42035339 42035509 -24632496 - MIR SINE MIR -17 245 76 621 195 17 75 chr20 42035952 42036126 -24631879 + MER103 DNA DNA 2 165 -1 181 195 73 0 chr20 42036146 42036187 -24631818 - MER5C DNA MER1_type -280 44 1 * 237 330 119 0 chr20 42036187 42036303 -24631702 + MIR SINE MIR 9 138 -124 802 216 46 55 chr20 42036301 42036519 -24631486 - MIR SINE MIR 0 262 47 221 162 27 0 chr20 42036584 42036621 -24631384 + L2 LINE L2 3210 3247 -25 357 252 98 49 chr20 42036804 42036947 -24631058 + MIR3 SINE MIR 13 162 -46 419 325 150 18 chr20 42037293 42037739 -24630266 - L2 LINE L2 -1229 2085 1581 294 266 13 0 chr20 42037799 42037878 -24630127 + MER116 DNA Mariner 1 80 0 245 353 24 35 chr20 42037897 42038067 -24629938 - L2 LINE L2 -1833 1481 1314 252 0 0 0 chr20 42038818 42038846 -24629159 + (A)n Simple_repeat Simple_repeat 1 28 0 584 299 51 24 chr20 42039033 42039327 -24628678 - L1ME4a LINE L1 -255 5866 5565 268 310 202 0 chr20 42039849 42039978 -24628027 + MIR SINE MIR 108 262 0 201 175 0 0 chr20 42040625 42040665 -24627340 + (TAAA)n Simple_repeat Simple_repeat 1 40 0 564 219 8 31 chr20 42041299 42041427 -24626578 + MIR SINE MIR 2 126 -136 421 109 10 27 chr20 42041431 42041527 -24626478 + L1PB4 LINE L1 5712 5791 -365 232 178 0 0 chr20 42041529 42041574 -24626431 + (TA)n Simple_repeat Simple_repeat 1 45 0 2261 128 8 31 chr20 42041601 42041984 -24626021 + L1PB4 LINE L1 5782 6155 -1 306 217 75 42 chr20 42041986 42042106 -24625899 + MIR SINE MIR 139 262 0 210 348 125 24 chr20 42042405 42042733 -24625272 + L2 LINE L2 2566 2926 -388 254 359 168 27 chr20 42043127 42043347 -24624658 - L2 LINE L2 -2 3270 3020 795 273 148 29 chr20 42043447 42043831 -24624174 + L2 LINE L2 2881 3310 -3 444 310 110 26 chr20 42044635 42044945 -24623060 + LTR33 LTR ERVL 4 339 -182 335 248 181 0 chr20 42045090 42045195 -24622810 - MIR SINE MIR -92 170 47 500 345 23 6 chr20 42045852 42046026 -24621979 + MIR SINE MIR 20 196 -66 452 308 91 10 chr20 42046112 42046310 -24621695 + MIR SINE MIR 1 214 -48 350 297 72 62 chr20 42046333 42046542 -24621463 + L2 LINE L2 2976 3186 -86 975 239 56 50 chr20 42046795 42047171 -24620834 - LTR33A LTR ERVL -2 521 144 240 111 0 0 chr20 42047175 42047220 -24620785 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 209 283 0 17 chr20 42048274 42048334 -24619671 + (TGAA)n Simple_repeat Simple_repeat 1 59 0 301 234 290 0 chr20 42048703 42048827 -24619178 - MIR SINE MIR -6 256 97 226 327 133 0 chr20 42048869 42048982 -24619023 + MIR SINE MIR 92 219 -43 270 333 22 0 chr20 42049636 42049726 -24618279 + L2 LINE L2 3200 3291 -22 339 243 106 55 chr20 42049754 42049926 -24618079 - MIR SINE MIR -61 147 16 1212 238 106 41 chr20 42049952 42050415 -24617590 - LTR33A LTR ERVL -29 494 2 325 156 0 62 chr20 42050446 42050510 -24617495 - L2 LINE L2 0 3272 3213 457 211 28 170 chr20 42050687 42050905 -24617100 - MIR SINE MIR -55 207 21 255 318 196 23 chr20 42051430 42051817 -24616188 - L2 LINE L2 -1 3271 2818 300 260 260 16 chr20 42052012 42052173 -24615832 + MIR SINE MIR 22 217 -45 6119 135 24 12 chr20 42052173 42052764 -24615241 + L1MC2 LINE L1 5185 5797 -547 2028 163 8 3 chr20 42052764 42053125 -24614880 + MER47A DNA MER2_type 1 363 -3 6119 135 24 12 chr20 42053125 42053659 -24614346 + L1MC2 LINE L1 5797 6323 -21 274 196 0 0 chr20 42053661 42053707 -24614298 + L2 LINE L2 3215 3260 -12 272 292 115 62 chr20 42054335 42054421 -24613584 + L2 LINE L2 2687 2767 -547 958 174 53 39 chr20 42054421 42054628 -24613377 + MER63A DNA MER1_type 1 210 0 272 292 115 62 chr20 42054628 42054784 -24613221 + L2 LINE L2 2767 2942 -372 331 262 126 49 chr20 42054929 42055106 -24612899 + MIR SINE MIR 16 202 -60 1005 158 6 0 chr20 42055172 42055330 -24612675 + MER5A DNA MER1_type 23 181 -8 376 341 39 0 chr20 42055496 42055625 -24612380 - MIR SINE MIR -31 231 98 225 0 0 0 chr20 42056037 42056062 -24611943 + (T)n Simple_repeat Simple_repeat 1 25 0 1589 263 75 4 chr20 42056520 42056973 -24611032 - LTR16C LTR ERVL -2 489 5 287 301 30 30 chr20 42057340 42057473 -24610532 + MIR3 SINE MIR 33 165 -43 194 268 134 21 chr20 42057571 42057668 -24610337 - MIR SINE MIR -65 143 36 241 218 128 0 chr20 42057738 42057816 -24610189 + LTR33 LTR ERVL 1 88 -433 924 243 0 0 chr20 42057829 42058010 -24609995 - MER5A DNA MER1_type -6 183 3 542 268 50 25 chr20 42058010 42058208 -24609797 + LTR33 LTR ERVL 86 288 -233 693 235 145 8 chr20 42059135 42059369 -24608636 - LTR16C LTR ERVL 0 491 226 225 0 0 0 chr20 42059968 42059993 -24608012 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 358 301 34 23 chr20 42060366 42060542 -24607463 + L2 LINE L2 2568 2745 -569 314 286 167 0 chr20 42060718 42060844 -24607161 - MIR SINE MIR -107 155 9 687 262 100 15 chr20 42062080 42062351 -24605654 - L2 LINE L2 0 3313 3020 1630 139 97 29 chr20 42062354 42062664 -24605341 - MER44D DNA MER2_type 0 609 9 835 252 105 57 chr20 42062718 42063078 -24604927 - L2 LINE L2 -311 3002 2621 2359 83 0 7 chr20 42063078 42063379 -24604626 + AluY SINE Alu 1 299 -12 835 252 105 57 chr20 42063379 42063456 -24604549 - L2 LINE L2 -692 2621 2549 1226 287 75 23 chr20 42063489 42063932 -24604073 - LTR16C LTR ERVL -9 482 17 310 320 0 13 chr20 42063951 42064104 -24603901 - L2 LINE L2 -828 2486 2336 281 264 28 0 chr20 42064180 42064252 -24603753 - L2 LINE L2 -977 2337 2264 775 252 4 57 chr20 42064835 42065024 -24602981 - MER58A DNA MER1_type -2198 222 25 2061 126 7 0 chr20 42065024 42065302 -24602703 + AluSg SINE Alu 1 280 -30 465 19 0 0 chr20 42065302 42065356 -24602649 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 775 252 4 57 chr20 42065356 42065395 -24602610 - MER58A DNA MER1_type -2393 27 5 228 311 0 0 chr20 42065778 42065839 -24602166 + CT-rich Low_complexity Low_complexity 3 63 0 704 200 7 0 chr20 42066265 42066410 -24601595 + MER5B DNA MER1_type 17 162 -16 262 355 28 0 chr20 42066449 42066556 -24601449 + L2 LINE L2 2622 2731 -583 352 296 35 0 chr20 42066691 42066806 -24601199 + L2 LINE L2 2934 3052 -220 291 249 171 58 chr20 42067073 42067366 -24600639 - L3 LINE CR1 -6 1571 1246 198 0 0 0 chr20 42068065 42068087 -24599918 + (T)n Simple_repeat Simple_repeat 1 22 0 370 287 57 0 chr20 42068143 42068265 -24599740 - MIR3 SINE MIR -3 205 77 2519 197 61 20 chr20 42068399 42068937 -24599068 + MER90 LTR ERV1 1 560 -15 387 320 34 23 chr20 42068941 42069116 -24598889 - L2 LINE L2 -285 3028 2852 2387 86 0 10 chr20 42069227 42069528 -24598477 - AluSp SINE Alu -15 298 1 470 238 60 36 chr20 42070551 42070719 -24597286 + L1ME1 LINE L1 5980 6151 -15 235 239 0 0 chr20 42070779 42070825 -24597180 + L2 LINE L2 3203 3248 -24 4816 50 16 15 chr20 42070935 42071549 -24596456 - L1PA8 LINE L1 0 6172 5558 473 295 0 0 chr20 42071599 42071704 -24596301 + MER81 DNA DNA 10 114 0 569 251 0 59 chr20 42071845 42072032 -24595973 + MER91B DNA MER1_type 15 190 0 190 396 50 10 chr20 42072976 42073077 -24594928 + L2 LINE L2 3153 3257 -15 312 240 130 0 chr20 42073153 42073253 -24594752 - MIR SINE MIR -65 143 31 462 219 5 181 chr20 42074850 42075065 -24592940 - MER5B DNA MER1_type -1 177 1 390 313 23 40 chr20 42075264 42075440 -24592565 - MIR3 SINE MIR -6 202 30 344 304 132 29 chr20 42075868 42076148 -24591857 + L2 LINE L2 2921 3229 -43 2509 269 75 11 chr20 42076162 42076974 -24591031 + L2 LINE L2 2101 2983 -330 1603 273 62 60 chr20 42077115 42077143 -24590862 + MLT1G LTR MaLR 1 27 -563 2017 128 0 0 chr20 42077143 42077424 -24590581 - AluSx SINE Alu -5 307 27 1603 273 62 60 chr20 42077424 42077974 -24590031 + MLT1G LTR MaLR 27 575 -15 462 259 42 88 chr20 42077974 42078167 -24589838 + L2 LINE L2 3126 3309 -4 205 298 53 23 chr20 42078221 42078352 -24589653 - MIR3 SINE MIR -26 182 48 313 208 0 13 chr20 42078673 42078750 -24589255 - L1ME4a LINE L1 0 6121 6046 245 27 0 0 chr20 42079224 42079261 -24588744 - L1PA3 LINE L1 0 6155 6119 208 360 63 9 chr20 42079602 42079713 -24588292 - MIR3 SINE MIR -11 197 81 215 235 0 20 chr20 42080026 42080077 -24587928 + GA-rich Low_complexity Low_complexity 5 54 0 494 227 173 0 chr20 42080933 42081083 -24586922 - MER5A DNA MER1_type -2 187 12 564 218 9 0 chr20 42082750 42082860 -24585145 - MER81 DNA DNA -3 111 1 219 318 112 9 chr20 42083344 42083451 -24584554 - L2 LINE L2 -19 3253 3136 1148 200 0 0 chr20 42085367 42085572 -24582433 + MER3 DNA MER1_type 5 209 0 1398 208 22 6 chr20 42085641 42085959 -24582046 - MER33 DNA MER1_type -1 323 1 1092 185 24 5 chr20 42086068 42086273 -24581732 + MER3 DNA MER1_type 1 209 0 2045 127 3 13 chr20 42086441 42086740 -24581265 + AluSx SINE Alu 1 296 -16 380 269 154 0 chr20 42086838 42086968 -24581037 + MIR SINE MIR 89 238 -24 2829 126 0 51 chr20 42087641 42088092 -24579913 - Tigger2a DNA MER2_type 0 434 7 441 0 0 0 chr20 42089548 42089597 -24578408 + (CA)n Simple_repeat Simple_repeat 2 50 0 658 283 92 27 chr20 42089788 42090124 -24577881 + MLT1L LTR MaLR 230 587 -28 499 288 38 103 chr20 42091514 42092021 -24575984 + L1MEd LINE L1 492 965 -5154 1515 195 56 3 chr20 42092329 42092632 -24575373 - L1MD2 LINE L1 -2 6357 6039 208 297 0 62 chr20 42092804 42092868 -24575137 + MER91 DNA MER1_type 1 60 -80 570 323 56 33 chr20 42093288 42093684 -24574321 + Tigger8 DNA MER2_type 230 634 -32 399 223 33 41 chr20 42094524 42094645 -24573360 + MIR SINE MIR 12 131 -131 280 330 74 49 chr20 42094856 42095271 -24572734 + L2 LINE L2 2615 3037 -235 398 261 88 51 chr20 42095271 42095486 -24572519 + L1ME2 LINE L1 5932 6154 -10 348 304 0 0 chr20 42095879 42095958 -24572047 + L2 LINE L2 3143 3221 -51 360 309 138 0 chr20 42096793 42096916 -24571089 + MIR3 SINE MIR 20 159 -49 545 142 8 0 chr20 42096965 42097068 -24570937 - MER5A DNA MER1_type -80 109 6 265 206 47 0 chr20 42097618 42097725 -24570280 + CT-rich Low_complexity Low_complexity 1 112 0 2125 134 10 0 chr20 42097733 42098040 -24569965 - AluSg SINE Alu 0 310 1 270 261 29 0 chr20 42098253 42098327 -24569678 + MIR SINE MIR 40 114 -94 1223 295 68 40 chr20 42098340 42098917 -24569088 - MLT1E LTR MaLR 0 593 1 386 275 148 109 chr20 42100086 42100479 -24567526 + L2 LINE L2 2906 3313 0 742 274 48 24 chr20 42100658 42100906 -24567099 + MIR SINE MIR 3 256 -6 650 320 48 37 chr20 42101486 42102093 -24565912 - L2 LINE L2 -4 3309 2698 342 0 0 0 chr20 42102712 42102750 -24565255 + (TG)n Simple_repeat Simple_repeat 2 39 0 774 257 35 109 chr20 42103462 42104087 -24563918 + MLT1G LTR MaLR 1 575 -20 915 92 0 0 chr20 42104239 42104308 -24563697 + (TTC)n Simple_repeat Simple_repeat 1 200 0 915 92 0 0 chr20 42104308 42104439 -24563566 + (TTC)n Simple_repeat Simple_repeat 3 133 0 2019 132 0 28 chr20 42104452 42104740 -24563265 - AluSx SINE Alu -32 280 1 277 367 33 0 chr20 42105571 42105691 -24562314 - L2 LINE L2 -10 3303 3180 259 196 130 43 chr20 42105687 42105779 -24562226 - L2 LINE L2 -41 3272 3173 * 1095 211 15 10 chr20 42105959 42106163 -24561842 - MER58A DNA MER1_type -1 223 19 719 315 54 39 chr20 42106262 42106744 -24561261 - L2 LINE L2 -363 2951 2463 314 268 0 2 chr20 42107680 42107768 -24560237 + MIR SINE MIR 46 133 -75 248 307 40 20 chr20 42107813 42107963 -24560042 + L2 LINE L2 2238 2390 -924 435 256 85 6 chr20 42107999 42108175 -24559830 - L2 LINE L2 -1138 2176 1987 476 251 223 6 chr20 42108202 42108377 -24559628 + MIR SINE MIR 48 260 -2 186 282 167 0 chr20 42109243 42109321 -24558684 + L2 LINE L2 3208 3298 -15 230 336 109 0 chr20 42109529 42109648 -24558357 + MIR3 SINE MIR 54 185 -23 932 150 19 0 chr20 42110390 42110550 -24557455 - MER5A DNA MER1_type -26 163 1 251 258 15 15 chr20 42110550 42110616 -24557389 + MIR SINE MIR 89 154 -108 393 275 21 35 chr20 42110655 42110797 -24557208 + MIR SINE MIR 28 167 -95 205 293 50 10 chr20 42110990 42111089 -24556916 + L3 LINE CR1 754 856 -721 230 341 48 0 chr20 42111836 42111962 -24556043 + MIR SINE MIR 120 251 -11 336 378 15 29 chr20 42112879 42113083 -24554922 + MIR SINE MIR 29 229 -33 461 283 76 31 chr20 42113288 42113511 -24554494 + MIR SINE MIR 20 252 -10 318 198 89 48 chr20 42113750 42113879 -24554126 + MIR SINE MIR 36 167 -63 2092 54 4 0 chr20 42114713 42114973 -24553032 + L1PA4 LINE L1 5895 6155 0 240 353 8 0 chr20 42115519 42115641 -24552364 + (TA)n Simple_repeat Simple_repeat 1 123 0 1442 112 64 0 chr20 42116148 42116397 -24551608 - L1MA5 LINE L1 -2 6298 6034 1538 245 43 77 chr20 42116687 42116902 -24551103 + L1MC4 LINE L1 7355 7576 -466 2456 72 7 0 chr20 42116902 42117206 -24550799 + AluY SINE Alu 1 306 -5 1538 245 43 77 chr20 42117206 42117692 -24550313 + L1MC4 LINE L1 7576 8032 -10 232 287 13 96 chr20 42117753 42117910 -24550095 - MER5B DNA MER1_type -6 172 29 187 280 13 27 chr20 42117860 42117935 -24550070 + MER5A DNA MER1_type 113 186 -3 * 237 336 14 42 chr20 42117938 42118081 -24549924 + MIR SINE MIR 46 184 -78 211 254 55 100 chr20 42118553 42118663 -24549342 + MIR SINE MIR 68 172 -90 228 230 0 0 chr20 42119810 42119864 -24548141 - MER5A DNA MER1_type 0 189 125 189 0 0 0 chr20 42119866 42119887 -24548118 + (CA)n Simple_repeat Simple_repeat 2 22 0 569 313 31 22 chr20 42119974 42120198 -24547807 + MIR SINE MIR 16 241 -21 337 326 124 16 chr20 42120257 42120515 -24547490 - L3 LINE CR1 -62 1515 1230 218 393 8 0 chr20 42120700 42120822 -24547183 + L3 LINE CR1 1344 1466 -111 1636 134 65 8 chr20 42120837 42121098 -24546907 + AluJb SINE Alu 1 276 -36 185 0 40 0 chr20 42121101 42121126 -24546879 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 579 292 86 73 chr20 42121259 42121722 -24546283 - LTR33 LTR ERVL -26 495 27 315 71 0 0 chr20 42121752 42121794 -24546211 + (TG)n Simple_repeat Simple_repeat 1 42 0 1732 171 4 4 chr20 42121794 42122074 -24545931 - AluSx SINE Alu -32 280 1 221 304 17 43 chr20 42123311 42123426 -24544579 + L2 LINE L2 2972 3083 -189 254 335 31 37 chr20 42124523 42124684 -24543321 + L3 LINE CR1 1068 1227 -350 698 44 0 0 chr20 42124779 42124870 -24543135 - L1PA5 LINE L1 0 6154 6064 798 0 0 0 chr20 42124872 42124963 -24543042 + L1PA4 LINE L1 5991 6081 -74 293 301 21 0 chr20 42125258 42125351 -24542654 + L3 LINE CR1 1418 1512 -65 190 299 45 0 chr20 42125760 42125827 -24542178 - MIR SINE MIR -58 150 81 43577 35 21 4 chr20 42126074 42132122 -24535883 + L1PA2 LINE L1 1 6155 0 195 42 0 0 chr20 42132221 42132245 -24535760 + (A)n Simple_repeat Simple_repeat 1 24 0 713 272 21 16 chr20 42132327 42132570 -24535435 + MIR SINE MIR 9 252 -10 680 209 144 0 chr20 42132713 42132866 -24535139 - MER5B DNA MER1_type -3 175 1 770 182 123 12 chr20 42132874 42133044 -24534961 + MER5A DNA MER1_type 1 189 0 218 379 52 0 chr20 42133107 42133223 -24534782 + MIR SINE MIR 32 153 -55 1575 216 54 48 chr20 42133264 42133726 -24534279 + MLT1C LTR MaLR 1 465 -2 640 288 25 21 chr20 42133761 42133997 -24534008 - MIR SINE MIR -5 257 21 228 111 0 0 chr20 42134300 42134336 -24533669 + (CAG)n Simple_repeat Simple_repeat 1 36 0 630 279 25 33 chr20 42134647 42134887 -24533118 + MIR SINE MIR 20 257 -5 254 325 40 20 chr20 42135115 42135266 -24532739 + MIR SINE MIR 109 262 0 218 294 105 20 chr20 42135510 42135663 -24532342 - L3 LINE CR1 -2 1575 1410 311 354 39 0 chr20 42136079 42136209 -24531796 + L2 LINE L2 3133 3267 -5 223 236 18 18 chr20 42136230 42136285 -24531720 + L2 LINE L2 3003 3057 -215 541 217 186 12 chr20 42136644 42136805 -24531200 - MER5A DNA MER1_type 0 189 1 2036 105 4 7 chr20 42136896 42137173 -24530832 + AluSx SINE Alu 1 276 -36 456 19 0 0 chr20 42137177 42137230 -24530775 + (CA)n Simple_repeat Simple_repeat 2 54 0 251 136 17 51 chr20 42137287 42137346 -24530659 + L1ME LINE L1 5612 5668 -453 924 200 5 82 chr20 42137400 42137620 -24530385 - MER20 DNA MER1_type 0 219 17 296 355 79 0 chr20 42137703 42137855 -24530150 - MIR SINE MIR -78 184 21 633 233 5 68 chr20 42137884 42138103 -24529902 + L1ME4a LINE L1 5717 5921 -200 269 291 45 9 chr20 42139267 42139377 -24528628 - L3 LINE CR1 -126 1451 1338 373 305 176 9 chr20 42139401 42139611 -24528394 - MIR SINE MIR -3 259 15 24 32 0 0 chr20 42139829 42139860 -24528145 + AT_rich Low_complexity Low_complexity 1 31 0 1022 272 10 0 chr20 42139860 42140154 -24527851 + L1M4 LINE L1 4307 4603 -1543 780 149 37 0 chr20 42140235 42140369 -24527636 + FLAM_C SINE Alu 2 140 -3 2230 121 0 13 chr20 42140794 42141108 -24526897 - AluSx SINE Alu -2 310 1 1797 148 48 58 chr20 42141135 42141336 -24526669 - THE1C LTR MaLR 0 375 178 1980 143 28 0 chr20 42141336 42141623 -24526382 - AluSx SINE Alu -17 295 1 1797 148 48 58 chr20 42141623 42141800 -24526205 - THE1C LTR MaLR -197 178 1 1301 156 43 16 chr20 42142126 42142383 -24525622 + MER21A LTR ERV1 1 264 -667 2995 152 55 41 chr20 42142388 42142929 -24525076 + MER21A LTR ERV1 376 924 -7 371 241 170 85 chr20 42143009 42143233 -24524772 - MIR SINE MIR 0 262 20 370 193 96 0 chr20 42144424 42144507 -24523498 + MER5B DNA MER1_type 3 93 -85 202 56 56 0 chr20 42145045 42145081 -24522924 + CT-rich Low_complexity Low_complexity 1 38 0 337 260 191 6 chr20 42145154 42145312 -24522693 - MIR SINE MIR -58 204 19 1883 162 0 7 chr20 42145455 42145757 -24522248 - AluSx SINE Alu -12 300 1 245 328 35 9 chr20 42146058 42146174 -24521831 - MIR SINE MIR -71 191 73 229 195 169 76 chr20 42146879 42146997 -24521008 - LTR16A LTR ERVL -5 445 317 314 246 8 51 chr20 42147015 42147133 -24520872 - LTR16A LTR ERVL -93 357 245 2416 97 3 3 chr20 42147405 42147713 -24520292 - AluSq SINE Alu -5 308 1 392 103 0 175 chr20 42147938 42148035 -24519970 - MADE1 DNA Mariner 0 80 1 203 272 70 53 chr20 42148546 42148660 -24519345 - L2 LINE L2 -1 3271 3156 237 350 36 22 chr20 42148953 42149090 -24518915 - MER5A DNA MER1_type -1 188 50 293 286 117 26 chr20 42149422 42149576 -24518429 - MIR SINE MIR -14 248 81 316 297 109 7 chr20 42150375 42150513 -24517492 - MIR SINE MIR 0 262 111 184 385 0 0 chr20 42151341 42151406 -24516599 + L2 LINE L2 3187 3251 -21 903 251 32 9 chr20 42151457 42151676 -24516329 + MER58A DNA MER1_type 1 224 0 539 248 51 47 chr20 42151754 42151988 -24516017 + L2 LINE L2 3078 3312 -1 226 216 59 0 chr20 42152093 42152144 -24515861 - MIR SINE MIR -92 170 117 537 188 208 0 chr20 42152155 42152304 -24515701 - MER5A DNA MER1_type 0 189 10 207 0 0 0 chr20 42152618 42152641 -24515364 + (A)n Simple_repeat Simple_repeat 1 23 0 319 319 59 0 chr20 42153184 42153319 -24514686 + MIR SINE MIR 65 207 -55 526 320 74 9 chr20 42154001 42154232 -24513773 - MIR SINE MIR -6 256 11 185 274 0 0 chr20 42154239 42154290 -24513715 + L2 LINE L2 2905 2955 -317 2175 96 14 0 chr20 42155043 42155363 -24512642 - AluSq SINE Alu 0 324 1 182 336 17 43 chr20 42156278 42156394 -24511611 - L3 LINE CR1 -126 1451 1339 602 229 35 57 chr20 42156602 42156849 -24511156 + MLT1G1 LTR MaLR 6 268 -287 773 247 21 47 chr20 42156891 42157081 -24510924 + MLT1G1 LTR MaLR 407 591 -4 246 383 0 9 chr20 42157908 42158023 -24509982 - MIR SINE MIR -61 147 34 389 302 0 47 chr20 42158432 42158581 -24509424 + MIR3 SINE MIR 23 164 -44 332 289 0 10 chr20 42158627 42158724 -24509281 + MIR SINE MIR 58 153 -109 641 239 54 5 chr20 42158989 42159173 -24508832 - MIR SINE MIR 0 262 70 2639 61 0 6 chr20 42159214 42159526 -24508479 - AluY SINE Alu -1 310 1 199 284 54 0 chr20 42159630 42159704 -24508301 - MIR SINE MIR -66 196 119 198 0 0 0 chr20 42160253 42160275 -24507730 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 514 149 8 8 chr20 42160450 42160571 -24507434 + (TCCA)n Simple_repeat Simple_repeat 3 123 0 855 263 36 5 chr20 42160741 42160965 -24507040 - MIR SINE MIR -31 231 1 396 326 0 16 chr20 42161715 42161844 -24506161 + MIR SINE MIR 11 137 -125 207 0 0 0 chr20 42161911 42161934 -24506071 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 247 313 114 23 chr20 42162646 42162822 -24505183 - L2 LINE L2 -560 2754 2563 402 176 0 0 chr20 42162844 42162929 -24505076 + GA-rich Low_complexity Low_complexity 2 86 0 207 324 117 0 chr20 42163883 42163994 -24504011 - MIR SINE MIR -65 197 74 547 216 12 48 chr20 42168709 42168876 -24499129 - MIR SINE MIR -14 248 88 336 300 115 45 chr20 42169282 42169482 -24498523 - MIR SINE MIR -15 247 34 312 314 58 7 chr20 42169955 42170092 -24497913 + L2 LINE L2 3116 3259 -13 186 259 69 35 chr20 42171012 42171070 -24496935 - L2 LINE L2 -20 3252 3193 408 270 113 0 chr20 42171137 42171252 -24496753 - L2 LINE L2 -1 3271 3144 1210 340 81 31 chr20 42171468 42172414 -24495591 - L2 LINE L2 -360 2954 1961 226 315 22 0 chr20 42173966 42174058 -24493947 + L3 LINE CR1 1016 1109 -468 397 250 153 0 chr20 42174086 42174238 -24493767 + MER5A DNA MER1_type 4 182 -7 419 337 22 0 chr20 42174283 42174461 -24493544 + L3 LINE CR1 1194 1375 -202 205 287 62 47 chr20 42175018 42175147 -24492858 + MIR SINE MIR 68 198 -64 230 375 40 55 chr20 42176138 42176391 -24491614 + L3 LINE CR1 32 280 -1297 410 233 159 23 chr20 42176459 42176635 -24491370 - LTR33A LTR ERVL -3 520 321 259 216 112 112 chr20 42176754 42176888 -24491117 - LTR33 LTR ERVL -345 176 43 499 273 99 37 chr20 42177166 42177255 -24490750 - MIR SINE MIR -5 257 175 2456 114 60 48 chr20 42177255 42177675 -24490330 + MSTA LTR MaLR 4 428 0 499 273 99 37 chr20 42177675 42177827 -24490178 - MIR SINE MIR -87 175 1 1700 213 56 20 chr20 42180841 42181287 -24486718 - MLT1C LTR MaLR -3 464 3 1382 171 53 50 chr20 42183019 42183176 -24484829 - AluJo SINE Alu 0 305 145 2420 94 0 0 chr20 42183176 42183483 -24484522 - AluSg SINE Alu -3 307 1 1382 171 53 50 chr20 42183483 42183629 -24484376 - AluJo SINE Alu -160 145 1 371 351 76 23 chr20 42183637 42183899 -24484106 - L2 LINE L2 -602 2712 2437 247 111 0 0 chr20 42184785 42184821 -24483184 + MIR SINE MIR 110 145 -63 527 274 99 14 chr20 42185062 42185274 -24482731 + MIR SINE MIR 8 237 -25 226 211 14 99 chr20 42185949 42186020 -24481985 - MIR SINE MIR -119 143 79 488 189 21 0 chr20 42186410 42186505 -24481500 - MER20 DNA MER1_type -90 129 33 516 160 59 155 chr20 42186622 42186841 -24481164 + MER33 DNA MER1_type 1 198 -126 2173 171 0 21 chr20 42186842 42187216 -24480789 + MER47A DNA MER2_type 1 366 0 536 190 16 0 chr20 42187216 42187337 -24480668 + MER33 DNA MER1_type 236 358 -5 956 197 14 49 chr20 42187349 42187572 -24480433 + MER20 DNA MER1_type 5 219 0 256 334 32 23 chr20 42187670 42187846 -24480159 - MIR SINE MIR -67 141 16 1335 240 76 28 chr20 42188623 42189057 -24478948 + LTR16A1 LTR ERVL 3 457 0 381 226 17 52 chr20 42189879 42189994 -24478011 + L2 LINE L2 3162 3272 0 315 179 0 0 chr20 42190034 42190101 -24477904 + (TGGG)n Simple_repeat Simple_repeat 1 67 0 243 369 27 0 chr20 42190449 42190560 -24477445 - MIR SINE MIR 0 262 149 * 477 370 53 3 chr20 42190547 42190869 -24477136 + L2 LINE L2 2338 2675 -639 520 355 47 41 chr20 42190949 42191414 -24476591 + L2 LINE L2 2804 3271 -1 223 293 94 28 chr20 42191420 42191526 -24476479 - MIR SINE MIR -130 132 20 1818 172 9 29 chr20 42191840 42192188 -24475817 + MER58B DNA MER1_type 1 341 0 288 130 0 0 chr20 42192510 42192556 -24475449 + (CA)n Simple_repeat Simple_repeat 1 46 0 274 367 0 0 chr20 42192913 42193022 -24474983 - MIR SINE MIR -6 256 148 2244 112 3 0 chr20 42193024 42193319 -24474686 - AluSp SINE Alu -17 296 1 337 288 81 0 chr20 42193533 42193644 -24474361 + MIR SINE MIR 71 190 -72 403 245 60 33 chr20 42193918 42194230 -24473775 + MLT1I LTR MaLR 21 409 0 504 0 0 0 chr20 42194341 42194397 -24473608 + (TG)n Simple_repeat Simple_repeat 2 57 0 567 0 0 0 chr20 42196301 42196364 -24471641 + (TA)n Simple_repeat Simple_repeat 1 63 0 224 261 22 76 chr20 42196437 42196529 -24471476 - MIR SINE MIR -102 106 20 214 226 38 0 chr20 42196655 42196708 -24471297 + MIR SINE MIR 93 147 -61 274 294 50 31 chr20 42197391 42197551 -24470454 + L3 LINE CR1 1323 1485 -92 468 91 0 0 chr20 42197681 42197747 -24470258 + (TCCA)n Simple_repeat Simple_repeat 1 66 0 337 335 71 52 chr20 42197761 42197878 -24470127 - L2 LINE L2 -39 3274 3161 549 0 0 0 chr20 42197878 42197939 -24470066 + (TA)n Simple_repeat Simple_repeat 2 62 0 337 335 71 52 chr20 42197939 42198283 -24469722 - L2 LINE L2 -152 3161 2804 1792 179 3 3 chr20 42199090 42199397 -24468608 + MLT1C LTR MaLR 159 465 -2 180 111 0 0 chr20 42202055 42202082 -24465923 + (TCCA)n Simple_repeat Simple_repeat 1 27 0 25 0 0 0 chr20 42202436 42202461 -24465544 + AT_rich Low_complexity Low_complexity 1 25 0 633 321 30 46 chr20 42203258 42203629 -24464376 - MLT1I LTR MaLR -5 404 40 237 343 84 7 chr20 42203843 42203986 -24464019 - L3 LINE CR1 -368 1209 1056 325 330 9 0 chr20 42204278 42204393 -24463612 - L3 LINE CR1 -900 677 562 194 257 148 30 chr20 42204451 42204552 -24463453 - L3 LINE CR1 -1123 454 342 267 316 0 0 chr20 42205306 42205401 -24462604 + L1ME4a LINE L1 5634 5728 -393 6250 142 23 32 chr20 42205456 42207678 -24460327 + L1MA5A LINE L1 4105 6297 0 348 320 0 0 chr20 42207691 42207813 -24460192 + L1ME4a LINE L1 5773 5894 -227 647 267 26 11 chr20 42207902 42208093 -24459912 - L1ME3A LINE L1 -14 6156 5963 261 0 0 0 chr20 42208146 42208175 -24459830 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 3485 146 0 13 chr20 42208176 42208772 -24459233 - L1PA16 LINE L1 -25 6141 5554 2363 161 31 19 chr20 42208763 42209495 -24458510 + L1PA16 LINE L1 4823 5562 -604 * 246 275 0 14 chr20 42210225 42210294 -24457711 + MIR3 SINE MIR 92 159 -49 243 0 0 0 chr20 42210448 42210475 -24457530 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 556 302 43 0 chr20 42211032 42211171 -24456834 - L2 LINE L2 -10 3262 3118 426 362 82 31 chr20 42211434 42211846 -24456159 - L2 LINE L2 -273 2999 2567 707 125 0 90 chr20 42212111 42212255 -24455750 - AluSp/q SINE Alu 0 313 183 212 240 200 10 chr20 42212277 42212377 -24455628 - MIR SINE MIR -71 191 73 987 340 92 13 chr20 42212999 42213696 -24454309 + L2 LINE L2 1772 2523 -791 21 36 0 0 chr20 42214383 42214411 -24453594 + AT_rich Low_complexity Low_complexity 1 28 0 391 326 93 25 chr20 42214735 42215468 -24452537 + HAL1b LINE L1 65 847 -501 2152 131 50 8 chr20 42215516 42215876 -24452129 + THE1C LTR MaLR 1 375 0 2170 129 0 0 chr20 42215970 42216265 -24451740 + AluSg SINE Alu 1 295 -15 306 294 113 22 chr20 42216322 42216553 -24451452 + L1MC4 LINE L1 2398 2649 -3891 1264 63 19 63 chr20 42216581 42216786 -24451219 + L1MA1 LINE L1 6102 6297 -5 305 297 68 47 chr20 42216836 42217028 -24450977 + L1MC4 LINE L1 2666 2861 -3679 2622 252 102 81 chr20 42217102 42218446 -24449559 + L1MC4 LINE L1 4779 6094 -2342 2083 106 0 3 chr20 42218446 42218751 -24449254 + AluSc SINE Alu 2 305 0 2622 252 102 81 chr20 42218751 42219446 -24448559 + L1MC4 LINE L1 6094 6773 -1663 2337 88 0 10 chr20 42219446 42219751 -24448254 - AluSc SINE Alu -7 302 1 2622 252 102 81 chr20 42219751 42219780 -24448225 + L1MC4 LINE L1 6773 6800 -1636 2435 92 3 0 chr20 42219780 42220085 -24447920 + AluSq SINE Alu 1 306 -7 2622 252 102 81 chr20 42220085 42220561 -24447444 + L1MC4 LINE L1 6800 7265 -1171 284 0 0 27 chr20 42220561 42220598 -24447407 + (TTA)n Simple_repeat Simple_repeat 3 38 0 2622 252 102 81 chr20 42220598 42221619 -24446386 + L1MC4 LINE L1 7265 8434 -2 316 242 57 32 chr20 42221641 42221765 -24446240 + L1MC5 LINE L1 7788 7914 -47 247 271 14 14 chr20 42221859 42221929 -24446076 + MIR SINE MIR 82 151 -111 419 328 83 79 chr20 42222076 42222547 -24445458 + L2 LINE L2 2765 3261 -11 405 261 158 42 chr20 42222620 42222785 -24445220 + MIR3 SINE MIR 17 200 -8 211 308 77 31 chr20 42223338 42223468 -24444537 + MIR SINE MIR 45 180 -82 * 454 345 10 10 chr20 42223460 42223663 -24444342 - L2 LINE L2 -630 2684 2482 574 325 27 5 chr20 42224185 42224373 -24443632 - MIR SINE MIR -3 259 68 2143 142 7 0 chr20 42224875 42225185 -24442820 + AluSx SINE Alu 1 312 0 282 300 0 0 chr20 42225195 42225275 -24442730 + (TA)n Simple_repeat Simple_repeat 2 81 0 625 86 9 35 chr20 42225279 42225395 -24442610 - Charlie5 DNA MER1_type -266 2346 2234 282 116 0 0 chr20 42225404 42225447 -24442558 + (TG)n Simple_repeat Simple_repeat 2 44 0 252 349 59 18 chr20 42225502 42225673 -24442332 - MIR SINE MIR -62 146 16 459 324 115 11 chr20 42226901 42227188 -24440817 + MLT1I LTR MaLR 1 317 -92 4047 117 26 5 chr20 42227515 42228137 -24439868 + MER41B LTR ERV1 1 635 0 255 269 87 29 chr20 42228475 42228579 -24439426 - MIR SINE MIR -149 113 4 264 234 65 13 chr20 42229421 42229498 -24438507 - MIR SINE MIR -70 192 112 491 322 72 70 chr20 42229527 42229943 -24438062 - L2 LINE L2 -1 3312 2896 671 336 75 44 chr20 42230001 42230504 -24437501 + L3 LINE CR1 1058 1576 -1 524 294 53 29 chr20 42230906 42231076 -24436929 + L2 LINE L2 3136 3309 -4 263 315 135 0 chr20 42231093 42231182 -24436823 - MIR SINE MIR -155 107 7 420 309 92 18 chr20 42231874 42232211 -24435794 - HAL1b LINE L1 -573 775 414 198 0 0 0 chr20 42232607 42232629 -24435376 + (T)n Simple_repeat Simple_repeat 1 22 0 4035 91 7 0 chr20 42232693 42233243 -24434762 + MER41A LTR ERV1 1 554 0 2431 77 7 3 chr20 42234051 42234361 -24433644 + AluY SINE Alu 1 311 0 448 328 58 63 chr20 42234463 42234844 -24433161 + L3 LINE CR1 1198 1576 -1 1083 8 0 0 chr20 42234897 42235018 -24432987 + AluYb8 SINE Alu 197 317 -1 215 238 175 0 chr20 42235140 42235203 -24432802 - MIR SINE MIR -99 163 90 806 250 51 14 chr20 42235229 42235445 -24432560 - MER58A DNA MER1_type 0 224 1 430 316 104 71 chr20 42235971 42236906 -24431099 + L2 LINE L2 2304 3271 -1 244 295 162 9 chr20 42238963 42239068 -24428937 - MIR SINE MIR -69 139 19 913 228 114 25 chr20 42240363 42240723 -24427282 - LTR16A1 LTR ERVL 0 457 66 754 247 11 34 chr20 42241040 42241218 -24426787 + MER5B DNA MER1_type 1 174 -4 368 305 81 35 chr20 42241405 42241602 -24426403 + L2 LINE L2 3108 3313 0 2048 76 47 7 chr20 42241606 42241883 -24426122 + AluYa5 SINE Alu 1 288 -23 7537 27 0 1 chr20 42241915 42243603 -24424402 + L1PA3 LINE L1 4492 6179 0 2826 216 35 16 chr20 42243604 42244343 -24423662 + L1MB7 LINE L1 5423 6175 -9 1751 265 88 13 chr20 42245272 42245910 -24422095 + L2 LINE L2 2458 3153 -160 238 206 93 47 chr20 42246185 42246292 -24421713 + L1 LINE L1 4181 4292 -1854 222 217 58 43 chr20 42246469 42246538 -24421467 + L2 LINE L2 3203 3272 0 294 29 0 0 chr20 42246885 42246920 -24421085 + (TG)n Simple_repeat Simple_repeat 1 35 0 910 246 52 29 chr20 42247127 42247513 -24420492 + L1MC4 LINE L1 7632 8026 -16 22 0 0 0 chr20 42247697 42247719 -24420286 + AT_rich Low_complexity Low_complexity 1 22 0 243 311 56 54 chr20 42248265 42248692 -24419313 + L1ME LINE L1 3797 4224 -1922 462 332 90 28 chr20 42248953 42249275 -24418730 + L1ME LINE L1 4490 4831 -1315 447 19 0 0 chr20 42249278 42249330 -24418675 + (CA)n Simple_repeat Simple_repeat 1 52 0 23 0 0 0 chr20 42249719 42249742 -24418263 + AT_rich Low_complexity Low_complexity 1 23 0 2073 136 0 16 chr20 42249993 42250303 -24417702 + AluSx SINE Alu 1 305 -7 239 217 0 0 chr20 42250395 42250441 -24417564 + AluJ/monomer SINE Alu 1 46 -256 544 141 0 0 chr20 42250445 42250530 -24417475 + FRAM SINE Alu 75 159 -17 441 220 34 76 chr20 42250634 42250752 -24417253 + MER5A DNA MER1_type 15 127 -62 23 0 0 0 chr20 42251224 42251247 -24416758 + AT_rich Low_complexity Low_complexity 1 23 0 5015 201 51 42 chr20 42251628 42252015 -24415990 + Charlie1a DNA MER1_type 29 411 -2350 2339 90 0 3 chr20 42252015 42252314 -24415691 - AluY SINE Alu -13 298 1 5015 201 51 42 chr20 42252314 42253148 -24414857 + Charlie1a DNA MER1_type 411 1236 -1525 2236 94 0 7 chr20 42253148 42253436 -24414569 - AluSc SINE Alu -23 286 1 5015 201 51 42 chr20 42253436 42253494 -24414511 + Charlie1a DNA MER1_type 1236 1292 -1469 1970 141 0 7 chr20 42253494 42253785 -24414220 - AluSx SINE Alu -23 289 1 5015 201 51 42 chr20 42253785 42253913 -24414092 + Charlie1a DNA MER1_type 1292 1451 -4 1113 173 32 36 chr20 42253963 42254183 -24413822 - MER20 DNA MER1_type 0 219 1 233 281 8 25 chr20 42254199 42254320 -24413685 + L1ME LINE L1 5328 5446 -675 249 311 144 30 chr20 42254498 42254665 -24413340 + MIR SINE MIR 20 205 -57 527 341 108 57 chr20 42254669 42255094 -24412911 + HAL1 LINE L1 2 448 -2059 378 262 82 56 chr20 42255134 42255439 -24412566 + HAL1 LINE L1 787 1099 -1408 925 262 19 0 chr20 42255672 42255882 -24412123 + MIR SINE MIR 3 216 -46 25 65 0 0 chr20 42255893 42255939 -24412066 + AT_rich Low_complexity Low_complexity 1 46 0 309 283 150 16 chr20 42256005 42256312 -24411693 + HAL1 LINE L1 2149 2496 -11 183 91 0 91 chr20 42256361 42256394 -24411611 + L2 LINE L2 3221 3250 -22 188 250 117 0 chr20 42257180 42257240 -24410765 + MIR SINE MIR 85 151 -57 820 260 17 6 chr20 42257399 42257580 -24410425 - MER5A DNA MER1_type -6 183 1 387 258 170 6 chr20 42259411 42259570 -24408435 + MER5A DNA MER1_type 1 185 -4 1005 174 68 32 chr20 42259864 42260054 -24407951 + MER3 DNA MER1_type 12 208 -1 497 239 128 18 chr20 42261305 42261523 -24406482 + L2 LINE L2 2038 2279 -1035 190 323 0 11 chr20 42263109 42263202 -24404803 + L2 LINE L2 2405 2496 -818 1986 155 0 0 chr20 42263707 42264004 -24404001 - AluSx SINE Alu -15 297 1 223 314 108 0 chr20 42264034 42264136 -24403869 - MIR SINE MIR -52 210 98 385 298 72 14 chr20 42264607 42264815 -24403190 + L2 LINE L2 2842 3061 -211 925 234 15 0 chr20 42264940 42265137 -24402868 - MER3 DNA MER1_type -8 201 2 243 0 0 0 chr20 42265171 42265198 -24402807 + (CA)n Simple_repeat Simple_repeat 2 28 0 251 220 0 24 chr20 42265219 42265387 -24402618 + (TA)n Simple_repeat Simple_repeat 1 164 0 345 100 0 0 chr20 42265387 42265437 -24402568 + (TG)n Simple_repeat Simple_repeat 1 50 0 285 355 38 43 chr20 42265643 42265854 -24402151 - L2 LINE L2 -453 2861 2652 228 335 35 46 chr20 42266811 42267023 -24400982 + MIR SINE MIR 3 207 -55 1208 223 113 22 chr20 42267304 42267684 -24400321 + LTR45B LTR ERV1 75 525 0 421 279 18 0 chr20 42267765 42267876 -24400129 + L2 LINE L2 3154 3266 -6 315 0 0 0 chr20 42268175 42268210 -24399795 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 312 369 21 7 chr20 42268263 42268404 -24399601 + MIR SINE MIR 4 146 -116 346 305 56 51 chr20 42269233 42269430 -24398575 + L2 LINE L2 3075 3272 0 1333 191 0 24 chr20 42270021 42270273 -24397732 - AluJb SINE Alu 0 312 67 257 298 73 26 chr20 42270949 42271241 -24396764 + L1MC/D LINE L1 5522 5824 -520 306 0 0 0 chr20 42271490 42271524 -24396481 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 2225 134 39 16 chr20 42272295 42272682 -24395323 + L1MA2 LINE L1 5909 6304 0 1154 214 35 39 chr20 42272684 42273003 -24395002 - MER33 DNA MER1_type -14 310 1 188 128 26 51 chr20 42273036 42273075 -24394930 + MER5A DNA MER1_type 55 92 -97 376 254 53 9 chr20 42273371 42273485 -24394520 - MER5C DNA MER1_type -203 121 3 1656 173 10 33 chr20 42273571 42273877 -24394128 + AluJo SINE Alu 1 299 -13 936 223 103 50 chr20 42273877 42274187 -24393818 - L1ME3A LINE L1 -8 6162 5833 568 274 199 43 chr20 42274883 42275230 -24392775 + LTR16C LTR ERVL 88 488 -3 2103 119 0 3 chr20 42276217 42276503 -24391502 + AluSp SINE Alu 1 285 -28 942 253 18 5 chr20 42276934 42277155 -24390850 + MER58A DNA MER1_type 1 224 0 180 220 0 40 chr20 42277156 42277206 -24390799 + L2 LINE L2 3190 3237 -76 220 241 37 0 chr20 42277243 42277297 -24390708 + MIR SINE MIR 76 131 -131 1776 154 3 20 chr20 42277436 42277754 -24390251 + AluJo SINE Alu 6 312 0 1146 186 92 38 chr20 42277759 42278076 -24389929 + L1MD3 LINE L1 7661 7994 -1 203 263 0 18 chr20 42278141 42278198 -24389807 - L2 LINE L2 -12 3301 3246 205 283 50 0 chr20 42278455 42278515 -24389490 - MER91A DNA MER1_type 0 190 128 206 359 0 0 chr20 42278637 42278701 -24389304 - MER91A DNA MER1_type -132 64 1 886 215 11 0 chr20 42278821 42279007 -24388998 + MER5A DNA MER1_type 1 188 -1 2261 241 51 11 chr20 42281144 42281709 -24386296 + MLT1G LTR MaLR 3 590 0 258 196 0 0 chr20 42281816 42281867 -24386138 + L1MC4a LINE L1 7277 7327 -481 1217 157 0 34 chr20 42281868 42282103 -24385902 + AluJo SINE Alu 86 312 0 260 181 66 86 chr20 42282103 42282628 -24385377 + L1MC2 LINE L1 6208 6742 -1239 2246 114 7 0 chr20 42282628 42282934 -24385071 + AluSx SINE Alu 1 308 -4 260 181 66 86 chr20 42282934 42282954 -24385051 + L1MC2 LINE L1 6742 7981 0 279 0 0 0 chr20 42283075 42283106 -24384899 + (TA)n Simple_repeat Simple_repeat 1 31 0 2379 88 3 3 chr20 42283106 42283414 -24384591 - AluSp SINE Alu -5 308 1 706 266 35 4 chr20 42283443 42283672 -24384333 - MIR SINE MIR -11 251 16 216 200 0 0 chr20 42284625 42284675 -24383330 - MIR SINE MIR -132 130 81 1508 179 20 13 chr20 42284778 42285080 -24382925 - MER33 DNA MER1_type -2 322 19 269 227 101 42 chr20 42285083 42285202 -24382803 - MER106A DNA MER1_type 0 236 111 321 197 16 0 chr20 42285292 42285353 -24382652 - MER106A DNA MER1_type -174 62 1 1558 140 0 0 chr20 42285361 42285590 -24382415 + MER30 DNA MER1_type 1 229 -1 235 135 19 82 chr20 42285606 42285667 -24382338 + MIR3 SINE MIR 105 162 -46 582 249 38 119 chr20 42287181 42287575 -24380430 - L2 LINE L2 0 3313 2952 643 170 0 18 chr20 42288795 42288960 -24379045 + CT-rich Low_complexity Low_complexity 3 164 0 632 139 9 28 chr20 42288960 42289068 -24378937 - FLAM_A SINE Alu -36 106 1 724 232 17 0 chr20 42290342 42290519 -24377486 + MIR SINE MIR 69 248 -14 255 337 74 31 chr20 42290545 42290863 -24377142 + L2 LINE L2 2734 3076 -196 212 316 66 13 chr20 42290896 42290972 -24377033 + MER91C DNA MER1_type 36 115 -25 334 293 80 40 chr20 42291287 42291437 -24376568 + L2 LINE L2 3158 3313 0 2166 141 0 3 chr20 42292084 42292389 -24375616 - AluSx SINE Alu -8 304 1 1497 222 83 3 chr20 42292440 42292778 -24375227 + MLT1A1 LTR MaLR 1 365 0 394 337 30 6 chr20 42292883 42293052 -24374953 - MIR SINE MIR -14 248 76 241 290 123 32 chr20 42294364 42294616 -24373389 + L1ME LINE L1 5268 5542 -579 254 204 0 0 chr20 42295068 42295117 -24372888 - L2 LINE L2 -86 3227 3179 1069 241 62 34 chr20 42295121 42295474 -24372531 + MLT1A1 LTR MaLR 1 363 -2 186 133 0 0 chr20 42295511 42295541 -24372464 + (TAGA)n Simple_repeat Simple_repeat 4 33 0 424 133 13 0 chr20 42297279 42297354 -24370651 - MER5A DNA MER1_type -84 105 30 268 296 0 0 chr20 42297967 42298048 -24369957 + L2 LINE L2 3153 3233 -39 214 385 28 14 chr20 42298071 42298214 -24369791 + MIR3 SINE MIR 40 184 -24 266 305 78 23 chr20 42298296 42298424 -24369581 + L2 LINE L2 3137 3271 -1 826 251 55 0 chr20 42298476 42298695 -24369310 + MIR SINE MIR 16 246 -16 398 309 27 7 chr20 42298977 42299126 -24368879 + L2 LINE L2 2924 3075 -197 214 228 63 38 chr20 42300476 42300555 -24367450 + L2 LINE L2 3116 3196 -76 2690 98 48 29 chr20 42300604 42301022 -24366983 - MSTA LTR MaLR 0 428 3 1072 249 20 87 chr20 42301028 42301418 -24366587 + MLT1I LTR MaLR 46 409 0 313 309 11 11 chr20 42301436 42301530 -24366475 + GA-rich Low_complexity Low_complexity 4 97 0 317 331 21 28 chr20 42302737 42302879 -24365126 + MIR SINE MIR 2 142 -120 2908 166 40 1 chr20 42304281 42305012 -24362993 - L1M3 LINE L1 -382 5786 5027 1982 163 13 24 chr20 42305064 42305376 -24362629 + L1MB1 LINE L1 5799 6108 -60 2242 103 55 9 chr20 42305376 42305724 -24362281 - THE1B LTR MaLR 0 364 1 1982 163 13 24 chr20 42305724 42305785 -24362220 + L1MB1 LINE L1 6108 6168 0 199 299 102 66 chr20 42306383 42306423 -24361582 - MIR SINE MIR -78 184 147 2058 102 0 0 chr20 42306423 42306688 -24361317 + AluSg1 SINE Alu 39 303 -6 199 299 102 66 chr20 42306688 42306814 -24361191 - MIR SINE MIR -115 147 12 750 220 27 90 chr20 42307463 42307594 -24360411 + MER20 DNA MER1_type 7 120 -99 2197 117 3 0 chr20 42307594 42307893 -24360112 - AluSg SINE Alu -10 300 1 750 220 27 90 chr20 42307893 42307984 -24360021 + MER20 DNA MER1_type 120 215 -4 7604 40 1 1 chr20 42307992 42309092 -24358913 + L1PA5 LINE L1 5054 6153 -1 909 188 101 17 chr20 42309221 42309372 -24358633 + MSTD LTR MaLR 1 138 -258 1722 171 10 19 chr20 42309372 42309682 -24358323 + AluJo SINE Alu 1 307 -5 909 188 101 17 chr20 42309682 42309856 -24358149 + MSTD LTR MaLR 138 396 0 311 365 29 10 chr20 42309868 42309972 -24358033 + L2 LINE L2 3138 3243 -29 236 159 45 0 chr20 42309968 42310012 -24357993 + Alu SINE Alu 101 146 -156 * 1040 206 13 11 chr20 42310260 42310629 -24357376 + MLT1F1 LTR MaLR 2 510 -57 1121 231 34 52 chr20 42312597 42312982 -24355023 - MER39 LTR ERV1 -5 702 325 252 180 20 0 chr20 42313028 42313078 -24354927 - MER39 LTR ERV1 -653 54 4 23 0 0 0 chr20 42313847 42313870 -24354135 + AT_rich Low_complexity Low_complexity 1 23 0 405 299 29 0 chr20 42314074 42314211 -24353794 + MLT1L LTR MaLR 126 266 -349 501 288 74 23 chr20 42314274 42314489 -24353516 + MLT1L LTR MaLR 368 593 -22 415 316 34 47 chr20 42314507 42314741 -24353264 + L1ME4a LINE L1 5637 5867 -254 4274 279 83 12 chr20 42314742 42316294 -24351711 + L2 LINE L2 1074 2735 -579 890 252 148 60 chr20 42316283 42316370 -24351635 + L2 LINE L2 2843 2921 -392 * 2083 116 17 3 chr20 42316370 42316662 -24351343 - AluSx SINE Alu -16 296 1 890 252 148 60 chr20 42316662 42317006 -24350999 + L2 LINE L2 2921 3312 -1 3579 132 36 11 chr20 42317101 42317716 -24350289 - L1PA16 LINE L1 -3 6163 5534 339 351 61 0 chr20 42317719 42317884 -24350121 - MIR SINE MIR -23 239 65 265 249 123 9 chr20 42318175 42318373 -24349632 + L1ME4a LINE L1 5682 5908 -213 27 29 0 0 chr20 42318511 42318545 -24349460 + AT_rich Low_complexity Low_complexity 1 34 0 774 318 45 51 chr20 42318573 42319064 -24348941 - MLT1H LTR MaLR -32 517 30 303 271 28 76 chr20 42319285 42319429 -24348576 - MER5B DNA MER1_type -24 154 18 240 384 79 44 chr20 42320163 42320530 -24347475 - L2 LINE L2 -40 3232 2853 321 26 0 0 chr20 42320938 42320976 -24347029 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 21 36 0 0 chr20 42321194 42321222 -24346783 + AT_rich Low_complexity Low_complexity 1 28 0 224 317 92 42 chr20 42321363 42321505 -24346500 + MIR SINE MIR 15 163 -45 240 203 34 0 chr20 42322070 42322129 -24345876 + MLT1K LTR MaLR 509 569 -19 237 65 0 0 chr20 42322288 42322319 -24345686 + (A)n Simple_repeat Simple_repeat 1 31 0 273 119 0 0 chr20 42322616 42322658 -24345347 + (TG)n Simple_repeat Simple_repeat 2 43 0 272 291 61 26 chr20 42322941 42323171 -24344834 - L1ME4a LINE L1 -195 5926 5689 706 254 138 23 chr20 42323891 42324209 -24343796 + MLT1J2 LTR MaLR 1 347 -99 420 319 0 0 chr20 42324370 42324486 -24343519 + MIR3 SINE MIR 81 196 -12 217 188 42 0 chr20 42324777 42324825 -24343180 + (CATATA)n Simple_repeat Simple_repeat 5 54 0 26 30 0 0 chr20 42324885 42324918 -24343087 + AT_rich Low_complexity Low_complexity 1 33 0 5799 43 0 0 chr20 42324997 42325695 -24342310 - L1PA5 LINE L1 0 6154 5457 803 293 182 48 chr20 42325706 42326693 -24341312 + L1M4 LINE L1 2789 3908 -2238 387 303 45 25 chr20 42326702 42326900 -24341105 + MLT1K LTR MaLR 5 206 -382 307 285 16 24 chr20 42327081 42327204 -24340801 + MLT1K LTR MaLR 432 553 -35 498 320 29 19 chr20 42327252 42327568 -24340437 + L1M4 LINE L1 3920 4238 -1908 273 279 27 34 chr20 42327830 42327977 -24340028 + L1M4 LINE L1 4513 4658 -1488 1384 208 42 17 chr20 42328539 42328895 -24339110 - MLT1A1 LTR MaLR 0 365 1 2447 90 0 3 chr20 42329005 42329316 -24338689 + AluSg SINE Alu 1 310 0 296 273 61 10 chr20 42329545 42329644 -24338361 + MER58A DNA MER1_type 22 125 0 27 0 0 0 chr20 42329781 42329808 -24338197 + AT_rich Low_complexity Low_complexity 1 27 0 21 57 0 0 chr20 42330137 42330172 -24337833 + AT_rich Low_complexity Low_complexity 1 35 0 2224 249 23 12 chr20 42330228 42330967 -24337038 + L1ME1 LINE L1 2475 3221 -2925 1040 123 0 0 chr20 42330968 42331106 -24336899 + AluSq/x SINE Alu 2 139 -173 1885 98 0 0 chr20 42331106 42331352 -24336653 + AluSq SINE Alu 68 313 0 633 250 22 9 chr20 42331352 42331580 -24336425 + L1ME1 LINE L1 3211 3441 -2705 2969 234 86 12 chr20 42331671 42332845 -24335160 + L1ME1 LINE L1 4887 6145 -21 310 278 77 26 chr20 42333298 42333492 -24334513 + L1M4 LINE L1 3699 3902 -2244 220 290 32 32 chr20 42333511 42333604 -24334401 + L2 LINE L2 2969 3061 -252 1949 112 69 0 chr20 42333659 42333936 -24334069 - AluSx SINE Alu -16 296 1 303 311 102 24 chr20 42333996 42334289 -24333716 + L1M4 LINE L1 3898 4213 -1933 310 313 33 99 chr20 42334292 42334564 -24333441 + L1M4 LINE L1 4237 4490 -1656 263 211 0 0 chr20 42334581 42334638 -24333367 + L1M4 LINE L1 4534 4590 -1556 347 214 20 189 chr20 42334921 42335000 -24333005 + MIR SINE MIR 49 140 -122 1539 200 18 11 chr20 42335000 42335167 -24332838 - AluJo SINE Alu -25 287 116 248 0 31 0 chr20 42335167 42335199 -24332806 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 1539 200 18 11 chr20 42335199 42335316 -24332689 - AluJo SINE Alu -196 116 1 347 214 20 189 chr20 42335316 42335484 -24332521 + MIR SINE MIR 140 254 -8 1592 216 58 27 chr20 42335804 42336249 -24331756 + MLT1C LTR MaLR 1 459 -8 325 271 40 45 chr20 42336501 42336678 -24331327 + L1ME4a LINE L1 5746 5921 -200 1133 197 10 10 chr20 42337528 42337764 -24330241 - AluJo SINE Alu 0 314 79 236 289 149 0 chr20 42337764 42337878 -24330127 - MIR SINE MIR -12 250 120 848 188 68 15 chr20 42337889 42338155 -24329850 + MER33 DNA MER1_type 43 322 -2 386 310 43 0 chr20 42338736 42338852 -24329153 + L2 LINE L2 3192 3312 -1 1425 209 41 41 chr20 42339541 42339957 -24328048 + MLT1C LTR MaLR 50 465 -2 300 306 31 50 chr20 42340214 42340374 -24327631 - L1ME4a LINE L1 0 6121 5965 357 125 0 0 chr20 42341046 42341102 -24326903 + (CA)n Simple_repeat Simple_repeat 2 57 0 5821 91 40 2 chr20 42341387 42342998 -24325007 + L1PA13 LINE L1 4519 6163 0 343 310 44 54 chr20 42343421 42343624 -24324381 + L1ME LINE L1 5618 5818 -303 306 300 89 0 chr20 42344912 42345002 -24323003 - L2 LINE L2 -14 3299 3202 603 142 18 0 chr20 42345151 42345264 -24322741 - L1MA9 LINE L1 -340 5972 5858 1825 131 52 0 chr20 42345266 42345572 -24322433 + L1MA9 LINE L1 5986 6307 -5 4057 160 99 7 chr20 42345875 42346631 -24321374 + LTR1B LTR ERV1 1 826 0 274 341 65 18 chr20 42346781 42346951 -24321054 - MER5B DNA MER1_type 0 178 1 1709 164 32 51 chr20 42347164 42347465 -24320540 - MLT1A1 LTR MaLR 0 365 71 1958 132 75 55 chr20 42347465 42347904 -24320101 + LTR7 LTR ERV1 1 448 -2 1709 164 32 51 chr20 42347904 42347973 -24320032 - MLT1A1 LTR MaLR -294 71 2 21 0 0 0 chr20 42348146 42348167 -24319838 + AT_rich Low_complexity Low_complexity 1 21 0 237 350 143 0 chr20 42348855 42348995 -24319010 + MIR SINE MIR 15 174 -88 298 195 220 25 chr20 42350156 42350274 -24317731 - MER5A DNA MER1_type -12 177 37 288 238 0 0 chr20 42350756 42350819 -24317186 + L1ME LINE L1 5572 5634 -487 281 323 50 10 chr20 42351023 42351122 -24316883 - MIR SINE MIR -150 112 10 1206 167 123 0 chr20 42352202 42352454 -24315551 + MER49 LTR ERV1 1 283 -640 1534 196 50 9 chr20 42352486 42352827 -24315178 + MER4D LTR ERV1 549 903 0 345 332 5 49 chr20 42353211 42353416 -24314589 + MER117 DNA MER1_type 1 196 -1 464 239 80 0 chr20 42354133 42354246 -24313759 - L2 LINE L2 -1 3312 3191 284 152 0 51 chr20 42354464 42354484 -24313521 + A-rich Low_complexity Low_complexity 1 20 -55 2069 152 0 9 chr20 42354484 42354799 -24313206 + AluSx SINE Alu 1 312 0 284 152 0 51 chr20 42354799 42354857 -24313148 + A-rich Low_complexity Low_complexity 20 75 0 218 261 0 31 chr20 42354929 42354994 -24313011 + (TATATG)n Simple_repeat Simple_repeat 2 64 0 415 341 34 10 chr20 42355162 42355370 -24312635 - L2 LINE L2 -252 3061 2849 1006 295 113 11 chr20 42355446 42356691 -24311314 + L1ME3 LINE L1 4474 5855 -307 235 338 0 0 chr20 42357091 42357165 -24310840 - MIR3 SINE MIR -21 187 114 303 28 0 0 chr20 42357355 42357391 -24310614 + (TATG)n Simple_repeat Simple_repeat 2 37 0 230 273 16 125 chr20 42359503 42359631 -24308374 - MER5B DNA MER1_type -6 172 59 2252 112 7 0 chr20 42359705 42360009 -24307996 - AluSc SINE Alu -3 306 1 426 68 0 17 chr20 42360010 42360069 -24307936 - L1MC1 LINE L1 -5 6328 6271 210 97 0 0 chr20 42360078 42360109 -24307896 - MER5B DNA MER1_type -142 36 6 304 278 0 0 chr20 42360170 42360242 -24307763 - L2 LINE L2 0 3313 3242 2567 63 0 0 chr20 42360278 42360581 -24307424 - AluY SINE Alu -8 303 1 1212 189 19 80 chr20 42360606 42360919 -24307086 - MLT2D LTR ERVL -120 294 1 624 301 165 19 chr20 42360923 42361609 -24306396 - L2 LINE L2 -95 3218 2425 470 278 181 0 chr20 42363065 42363209 -24304796 - MER5A DNA MER1_type 0 189 20 586 294 63 58 chr20 42363709 42364071 -24303934 + L2 LINE L2 2623 2987 -285 373 219 0 0 chr20 42364864 42364937 -24303068 - MER5A DNA MER1_type -103 86 14 197 284 78 71 chr20 42364949 42365090 -24302915 + MIR SINE MIR 35 176 -86 * 576 329 59 9 chr20 42365063 42365285 -24302720 - MIR SINE MIR -1 261 29 378 0 0 0 chr20 42366385 42366427 -24301578 + (TG)n Simple_repeat Simple_repeat 1 42 0 309 251 64 82 chr20 42367072 42367238 -24300767 - MIR SINE MIR -58 150 17 1295 224 9 0 chr20 42368204 42368423 -24299582 - MER58A DNA MER1_type 0 224 4 1682 105 18 13 chr20 42368560 42368789 -24299216 + MER30 DNA MER1_type 1 230 0 252 231 0 0 chr20 42369011 42369063 -24298942 + L2 LINE L2 3262 3313 0 465 340 56 15 chr20 42369324 42369521 -24298484 - MIR SINE MIR -51 211 7 718 279 117 66 chr20 42369622 42370196 -24297809 - L1ME4a LINE L1 -34 6087 5485 218 352 16 16 chr20 42370523 42370648 -24297357 - L2 LINE L2 -9 3304 3180 870 326 119 41 chr20 42370840 42371793 -24296212 - L2 LINE L2 -628 2686 1644 2332 102 0 0 chr20 42371793 42372086 -24295919 + AluSc SINE Alu 1 293 -16 870 326 119 41 chr20 42372086 42372172 -24295833 - L2 LINE L2 -1670 1644 1566 180 0 0 0 chr20 42373408 42373428 -24294577 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 2052 126 0 82 chr20 42373462 42373803 -24294202 - AluSq SINE Alu 0 313 1 693 297 120 33 chr20 42373881 42374460 -24293545 - L1ME3A LINE L1 -219 5951 5328 588 278 24 18 chr20 42374687 42374856 -24293149 + LTR16C LTR ERVL 120 289 -202 385 259 259 9 chr20 42374898 42375118 -24292887 - MER5C DNA MER1_type -49 275 1 801 236 17 0 chr20 42375123 42375297 -24292708 + LTR16C LTR ERVL 311 487 -4 1715 273 134 32 chr20 42375312 42376827 -24291178 - L1ME3A LINE L1 -1052 5094 3426 278 247 26 0 chr20 42377096 42377173 -24290832 - L1M4 LINE L1 -1581 4565 4487 815 253 50 0 chr20 42378145 42378343 -24289662 + MIR SINE MIR 34 241 -21 1268 290 61 29 chr20 42378615 42379428 -24288577 - L2 LINE L2 0 3313 2487 1065 173 6 0 chr20 42379495 42379663 -24288342 - AluJb SINE Alu -12 300 132 404 140 0 0 chr20 42379663 42379720 -24288285 - AluS SINE Alu -260 58 2 1128 272 10 3 chr20 42379782 42380072 -24287933 - L2 LINE L2 -860 2454 2163 853 228 32 11 chr20 42380075 42380264 -24287741 + MER58A DNA MER1_type 4 196 -28 2032 148 35 40 chr20 42380326 42380703 -24287302 + THE1C LTR MaLR 1 375 0 1153 205 7 96 chr20 42380727 42380850 -24287155 + AluJo SINE Alu 23 155 -157 2254 88 3 0 chr20 42380850 42381177 -24286828 + AluSp SINE Alu 1 328 0 1153 205 7 96 chr20 42381177 42381354 -24286651 + AluJo SINE Alu 155 297 -15 2148 283 140 25 chr20 42381355 42382475 -24285530 - L2 LINE L2 -1244 2070 822 232 333 27 27 chr20 42382669 42382780 -24285225 - MIR SINE MIR -65 143 33 228 135 0 0 chr20 42383386 42383423 -24284582 + (TCCCC)n Simple_repeat Simple_repeat 5 41 0 229 290 65 0 chr20 42383423 42383516 -24284489 + MIR SINE MIR 108 206 -56 700 219 60 0 chr20 42383759 42383910 -24284095 + MER63 DNA MER1_type 1 786 -276 299 296 184 10 chr20 42384078 42384274 -24283731 - L2 LINE L2 -61 3252 3023 210 315 108 0 chr20 42384288 42384399 -24283606 + MIR SINE MIR 126 248 -14 27 92 0 0 chr20 42384840 42384916 -24283089 + AT_rich Low_complexity Low_complexity 1 76 0 4168 259 104 36 chr20 42384999 42385575 -24282430 + L1MC4a LINE L1 5528 6064 -1744 3962 82 49 0 chr20 42385575 42386086 -24281919 - L1PA10 LINE L1 -3 6165 5630 4168 259 104 36 chr20 42386086 42387262 -24280743 + L1MC4a LINE L1 6064 7398 -410 343 260 28 116 chr20 42387306 42387660 -24280345 + L1MC4 LINE L1 7719 8041 -1 213 309 29 0 chr20 42387671 42387739 -24280266 + MIR SINE MIR 180 249 -13 * 216 125 0 0 chr20 42387708 42387740 -24280265 + L2 LINE L2 3264 3295 -18 474 264 19 65 chr20 42388924 42389016 -24278989 - MIR SINE MIR -25 237 153 2181 97 3 7 chr20 42389016 42389306 -24278699 - AluSc SINE Alu -20 289 1 474 264 19 65 chr20 42389306 42389368 -24278637 - MIR SINE MIR -109 153 90 516 274 56 39 chr20 42390096 42390330 -24277675 + LTR16A1 LTR ERVL 216 453 -4 509 314 32 22 chr20 42390445 42390630 -24277375 - L2 LINE L2 -168 3104 2918 301 292 92 43 chr20 42390726 42390911 -24277094 - L2 LINE L2 -817 2497 2304 1996 130 125 78 chr20 42391087 42391446 -24276559 + MSTA LTR MaLR 1 342 -86 185 0 40 0 chr20 42391446 42391471 -24276534 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1963 121 11 11 chr20 42391478 42391760 -24276245 - AluSx SINE Alu -30 282 1 1996 130 125 78 chr20 42391760 42391801 -24276204 + MSTA LTR MaLR 347 428 0 263 299 15 0 chr20 42391875 42391942 -24276063 - MER91 DNA MER1_type -71 69 2 1364 174 41 41 chr20 42393285 42393579 -24274426 - AluJo SINE Alu -18 294 1 397 281 69 44 chr20 42393669 42393872 -24274133 + MIR SINE MIR 35 242 -20 201 122 0 49 chr20 42393907 42393948 -24274057 + (TAA)n Simple_repeat Simple_repeat 2 40 0 308 348 0 9 chr20 42394999 42395114 -24272891 - MIR SINE MIR -59 149 36 190 305 195 0 chr20 42395184 42395302 -24272703 - MIR SINE MIR -92 170 30 522 246 71 22 chr20 42395786 42395969 -24272036 + MIR SINE MIR 51 242 -20 229 280 0 0 chr20 42396614 42396664 -24271341 - MIR SINE MIR -78 130 81 333 302 36 14 chr20 42396777 42396916 -24271089 - MER115 DNA AcHobo -243 450 309 25 0 0 0 chr20 42397181 42397206 -24270799 + AT_rich Low_complexity Low_complexity 1 25 0 381 287 64 32 chr20 42397648 42397836 -24270169 + MER115 DNA AcHobo 8 201 -492 291 284 49 31 chr20 42397878 42398040 -24269965 + MER115 DNA AcHobo 284 448 -245 193 336 131 0 chr20 42398381 42398503 -24269502 + L2 LINE L2 2917 3054 -218 198 143 0 0 chr20 42398688 42398723 -24269282 + (TAAA)n Simple_repeat Simple_repeat 3 37 0 1193 185 83 5 chr20 42399451 42399667 -24268338 + MER46A DNA MER2_type 4 236 0 246 280 42 59 chr20 42399966 42400084 -24267921 + MIR SINE MIR 86 201 -61 195 292 214 0 chr20 42400308 42400397 -24267608 - L2 LINE L2 -5 3267 3160 777 195 0 53 chr20 42400835 42401004 -24267001 - MER58B DNA MER1_type -15 326 167 646 212 7 44 chr20 42401387 42401524 -24266481 - AluJo SINE Alu -137 175 44 315 49 0 0 chr20 42401569 42401610 -24266395 + (CA)n Simple_repeat Simple_repeat 1 41 0 579 254 43 73 chr20 42402282 42402514 -24265491 - L2 LINE L2 -24 3289 3065 270 380 80 0 chr20 42402615 42402728 -24265277 - L2 LINE L2 -15 3257 3136 2093 119 14 3 chr20 42402975 42403269 -24264736 - AluSx SINE Alu -15 297 1 568 210 157 3 chr20 42403565 42403856 -24264149 + LTR50 LTR ERVL 4 411 -384 294 258 109 39 chr20 42403851 42403979 -24264026 + LTR50 LTR ERVL 571 707 -88 * 1994 249 64 17 chr20 42403982 42404515 -24263490 - MER119 DNA MER1_type -21 562 5 282 218 103 0 chr20 42404520 42404598 -24263407 + LTR50 LTR ERVL 710 795 0 261 246 0 0 chr20 42406400 42406461 -24261544 - MLT1F1 LTR MaLR -13 554 494 1961 188 176 0 chr20 42407209 42407635 -24260370 + MLT1D LTR MaLR 5 505 0 344 360 58 33 chr20 42407820 42408428 -24259577 - L1ME2 LINE L1 -273 5891 5268 2097 115 51 0 chr20 42408488 42408784 -24259221 + AluSp SINE Alu 2 312 -1 459 0 0 0 chr20 42408813 42408864 -24259141 + (TG)n Simple_repeat Simple_repeat 2 52 0 560 41 14 0 chr20 42408909 42408982 -24259023 - L1PA4 LINE L1 -3 6152 6079 598 272 63 0 chr20 42409009 42409200 -24258805 + MLT1I LTR MaLR 3 205 -204 352 191 24 24 chr20 42409228 42409312 -24258693 + MLT1I LTR MaLR 320 403 -6 23 0 0 0 chr20 42409312 42409335 -24258670 + AT_rich Low_complexity Low_complexity 1 23 0 225 284 84 11 chr20 42409419 42409514 -24258491 - L1ME LINE L1 -230 5936 5835 803 289 114 44 chr20 42409613 42410732 -24257273 - L1ME2 LINE L1 -1053 5093 3903 403 242 0 11 chr20 42410727 42410818 -24257187 - L1ME LINE L1 -593 5766 5677 * 410 244 142 35 chr20 42410791 42411045 -24256960 - L1ME LINE L1 -2203 3943 3663 1385 210 23 4 chr20 42411045 42411307 -24256698 - Tigger7 DNA MER2_type -2220 267 1 786 217 92 109 chr20 42411307 42411610 -24256395 + MLT1A1 LTR MaLR 68 365 0 3349 187 19 15 chr20 42411610 42412293 -24255712 - L1MD2 LINE L1 -314 6045 5360 687 265 65 22 chr20 42412333 42412654 -24255351 - L1ME LINE L1 -3128 3018 2684 439 296 146 19 chr20 42412911 42413117 -24254888 - MIR SINE MIR -27 235 4 216 196 33 0 chr20 42413117 42413164 -24254841 + MIR SINE MIR 119 171 -37 455 273 21 28 chr20 42413214 42413357 -24254648 - MIR SINE MIR -10 252 111 424 281 98 78 chr20 42414272 42414607 -24253398 + L2 LINE L2 2972 3313 0 253 203 0 0 chr20 42414652 42414711 -24253294 + L1ME4a LINE L1 6059 6117 -4 348 274 21 0 chr20 42414895 42414990 -24253015 - MIR3 SINE MIR -6 202 106 14574 137 35 69 chr20 42415652 42417252 -24250753 - Tigger2 DNA MER2_type 0 2718 1065 646 231 15 0 chr20 42417252 42417386 -24250619 - FLAM_A SINE Alu -6 136 1 14574 137 35 69 chr20 42417386 42418001 -24250004 - Tigger2 DNA MER2_type -1653 1065 431 5521 110 18 31 chr20 42418001 42418884 -24249121 + MER4D LTR ERV1 1 872 0 14574 137 35 69 chr20 42418884 42419097 -24248908 - Tigger2 DNA MER2_type -2287 431 258 2210 111 7 0 chr20 42419097 42419394 -24248611 - AluSq SINE Alu -14 299 1 14574 137 35 69 chr20 42419394 42419644 -24248361 - Tigger2 DNA MER2_type -2460 258 1 345 270 44 0 chr20 42419666 42419803 -24248202 - L1ME3A LINE L1 -285 5885 5743 332 226 110 13 chr20 42419834 42419989 -24248016 - L1ME3A LINE L1 -1605 4541 4372 * 362 251 171 11 chr20 42419986 42420161 -24247844 - L1ME3A LINE L1 0 6170 5968 351 281 81 75 chr20 42420145 42420729 -24247276 - L1ME3A LINE L1 -1758 4388 3802 * 1683 246 70 23 chr20 42420768 42421315 -24246690 - L1ME3A LINE L1 -1 6169 5590 944 236 37 0 chr20 42421315 42421531 -24246474 + MER58A DNA MER1_type 1 224 0 1683 246 70 23 chr20 42421531 42421584 -24246421 - L1ME3A LINE L1 -580 5590 5541 474 292 74 24 chr20 42421647 42421938 -24246067 - L1M4 LINE L1 -2436 3710 3404 390 21 0 0 chr20 42422206 42422253 -24245752 + (CA)n Simple_repeat Simple_repeat 2 48 0 672 296 24 70 chr20 42422288 42422799 -24245206 - L1ME3A LINE L1 -223 5947 5461 674 288 65 27 chr20 42422927 42423562 -24244443 - L1M4 LINE L1 -2930 3216 2558 793 312 128 15 chr20 42423572 42423969 -24244036 + L2 LINE L2 2840 3281 -32 195 42 0 0 chr20 42424114 42424138 -24243867 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 465 301 24 26 chr20 42424163 42424542 -24243463 - L1M4 LINE L1 -3621 2525 2148 21 57 0 0 chr20 42425013 42425048 -24242957 + AT_rich Low_complexity Low_complexity 1 35 0 2104 126 0 0 chr20 42425120 42425406 -24242599 - AluSx SINE Alu -26 286 1 282 148 27 164 chr20 42425916 42426099 -24241906 + Charlie7 DNA MER1_type 2440 2597 -15 341 234 11 21 chr20 42426854 42426948 -24241057 - MLT1I LTR MaLR -23 386 294 290 272 113 31 chr20 42427116 42427311 -24240694 - MLT1I LTR MaLR -197 212 2 241 298 106 40 chr20 42427313 42427464 -24240541 + MIR SINE MIR 96 256 -6 207 0 0 0 chr20 42427932 42427955 -24240050 + (TG)n Simple_repeat Simple_repeat 2 24 0 196 283 193 48 chr20 42428150 42428295 -24239710 + MIR SINE MIR 21 186 -76 738 218 109 16 chr20 42428337 42428530 -24239475 - MIR SINE MIR -21 241 31 386 146 85 0 chr20 42428685 42428849 -24239156 + (TA)n Simple_repeat Simple_repeat 1 178 0 * 418 91 27 112 chr20 42428744 42428931 -24239074 + (TTTAA)n Simple_repeat Simple_repeat 2 172 0 425 86 27 113 chr20 42428943 42429129 -24238876 + (TTTAA)n Simple_repeat Simple_repeat 2 171 0 425 86 27 113 chr20 42429141 42429327 -24238678 + (TTTAA)n Simple_repeat Simple_repeat 2 171 0 25 31 0 0 chr20 42429330 42429362 -24238643 + AT_rich Low_complexity Low_complexity 1 32 0 182 229 0 0 chr20 42429595 42429630 -24238375 - L2 LINE L2 -2 3311 3277 2263 140 43 38 chr20 42430670 42431092 -24236913 + MSTC LTR MaLR 1 424 -4 1851 251 64 23 chr20 42431953 42432588 -24235417 - L1MD2 LINE L1 -35 6130 5480 2233 109 0 0 chr20 42432650 42432964 -24235041 - AluSq SINE Alu 0 314 1 342 0 0 0 chr20 42433006 42433044 -24234961 + (TG)n Simple_repeat Simple_repeat 2 39 0 677 314 60 24 chr20 42433666 42434163 -24233842 - L1ME3A LINE L1 -240 5913 5399 358 269 7 14 chr20 42434253 42434398 -24233607 - L1ME3A LINE L1 -842 5287 5144 275 258 103 0 chr20 42434650 42434747 -24233258 - L1ME3A LINE L1 -1299 4830 4724 266 277 81 27 chr20 42434837 42434985 -24233020 - L1ME3A LINE L1 -1534 4595 4440 2137 119 7 0 chr20 42435011 42435304 -24232701 + AluSg SINE Alu 5 299 -11 1104 260 94 60 chr20 42435421 42435542 -24232463 - L1ME3A LINE L1 -5 6165 6050 4605 17 0 0 chr20 42435542 42436070 -24231935 + L1PA2 LINE L1 5626 6153 -2 1104 260 94 60 chr20 42436070 42436567 -24231438 - L1ME3A LINE L1 -120 6050 5521 1268 300 93 20 chr20 42436664 42437732 -24230273 - L1ME3A LINE L1 -2320 3826 2681 305 268 62 53 chr20 42437759 42438002 -24230003 - L1ME3A LINE L1 -3528 2618 2374 496 283 211 21 chr20 42438270 42438705 -24229300 - L1ME3A LINE L1 -2687 3442 2925 2478 191 41 6 chr20 42438716 42439255 -24228750 - L1MD1 LINE L1 -15 6227 5670 629 299 75 12 chr20 42439510 42439911 -24228094 - L1ME3A LINE L1 -3440 2689 2264 275 284 96 61 chr20 42440016 42440213 -24227792 - L1ME3A LINE L1 -5 6165 5962 1043 198 4 46 chr20 42440425 42440607 -24227398 - L1MD3 LINE L1 -1148 6847 6659 210 71 0 0 chr20 42440607 42440635 -24227370 + (TA)n Simple_repeat Simple_repeat 2 29 0 1043 198 4 46 chr20 42440635 42440646 -24227359 - L1MD3 LINE L1 -1336 6659 6649 423 0 0 0 chr20 42440646 42440693 -24227312 + (TAGA)n Simple_repeat Simple_repeat 1 47 0 1043 198 4 46 chr20 42440693 42440736 -24227269 - L1MD3 LINE L1 -1346 6649 6620 375 254 6 12 chr20 42440784 42440957 -24227048 + (TCTA)n Simple_repeat Simple_repeat 4 175 0 589 325 40 12 chr20 42441425 42441754 -24226251 - HAL1b LINE L1 -710 638 301 22 35 0 0 chr20 42442078 42442107 -24225898 + AT_rich Low_complexity Low_complexity 1 29 0 1934 139 3 17 chr20 42442270 42442565 -24225440 - AluSx SINE Alu -21 291 1 1038 196 0 0 chr20 42443644 42443812 -24224193 + FAM SINE Alu 1 168 -7 359 296 81 40 chr20 42444263 42444727 -24223278 - L1MEd LINE L1 -4843 1467 942 1433 183 43 18 chr20 42444811 42445090 -24222915 - AluJb SINE Alu -26 286 1 369 276 103 0 chr20 42445217 42445362 -24222643 - L1MEd LINE L1 -5862 257 98 365 394 24 5 chr20 42445608 42445816 -24222189 - HAL1 LINE L1 -790 1717 1506 372 289 53 50 chr20 42445834 42446191 -24221814 - HAL1b LINE L1 -955 393 36 2614 58 0 0 chr20 42446756 42447067 -24220938 - AluY SINE Alu 0 311 1 519 315 129 9 chr20 42447751 42448070 -24219935 + L2 LINE L2 2693 3048 -224 257 242 10 91 chr20 42448119 42448218 -24219787 + L2 LINE L2 3223 3313 0 2027 137 3 3 chr20 42449291 42449591 -24218414 - AluSx SINE Alu -12 300 1 222 37 0 0 chr20 42449652 42449679 -24218326 + (A)n Simple_repeat Simple_repeat 1 27 0 194 324 19 28 chr20 42451597 42451705 -24216300 - MIR3 SINE MIR -11 197 91 256 223 204 10 chr20 42452014 42452117 -24215888 + MIR SINE MIR 96 218 -44 1295 203 0 28 chr20 42452216 42452467 -24215538 - AluJo SINE Alu -23 289 46 798 225 64 17 chr20 42453331 42453562 -24214443 + MIR SINE MIR 10 250 -12 2469 60 0 10 chr20 42454156 42454454 -24213551 + AluY SINE Alu 1 295 -16 238 282 83 58 chr20 42454526 42454682 -24213323 + MIR SINE MIR 29 188 -74 421 327 22 40 chr20 42454705 42454910 -24213095 - MIR SINE MIR -13 249 51 2014 142 14 11 chr20 42454938 42455291 -24212714 + L1PA15 LINE L1 5803 6156 -9 253 365 60 15 chr20 42456030 42456230 -24211775 - MIR SINE MIR -20 242 34 282 277 42 48 chr20 42456299 42456451 -24211554 + MIR SINE MIR 39 189 -62 282 281 123 66 chr20 42456451 42456680 -24211325 + L1MC4a LINE L1 5353 5582 -584 343 321 22 27 chr20 42456717 42456901 -24211104 + L1MC4a LINE L1 5704 5886 -1922 340 271 136 0 chr20 42457319 42457437 -24210568 - MIR SINE MIR -109 153 20 477 360 18 6 chr20 42457440 42457604 -24210401 - L2 LINE L2 -4 3268 3103 650 237 13 124 chr20 42457770 42458048 -24209957 - MIR SINE MIR 0 262 17 352 358 83 49 chr20 42458599 42458985 -24209020 + L2 LINE L2 2872 3270 -2 298 125 0 0 chr20 42459192 42459232 -24208773 + 5S rRNA rRNA 56 95 -26 3305 239 96 50 chr20 42459354 42460928 -24207077 + HAL1 LINE L1 853 2498 -9 25 0 0 0 chr20 42460929 42460954 -24207051 + AT_rich Low_complexity Low_complexity 1 25 0 59 15 0 0 chr20 42461598 42461664 -24206341 + AT_rich Low_complexity Low_complexity 1 66 0 2700 107 20 3 chr20 42461694 42462049 -24205956 + THE1B LTR MaLR 1 361 -3 1047 268 131 36 chr20 42462094 42462681 -24205324 + L1MC4a LINE L1 5255 5897 -1911 10804 134 11 4 chr20 42462688 42464348 -24203657 - Tigger1 DNA MER2_type -102 2316 645 781 202 8 0 chr20 42464627 42464756 -24203249 - FLAM_C SINE Alu -12 131 2 377 172 0 0 chr20 42465865 42465923 -24202082 - Tigger1 DNA MER2_type -1782 636 579 2219 171 16 12 chr20 42465923 42466355 -24201650 - MER57B LTR ERV1 0 434 1 * 3275 170 33 15 chr20 42466355 42466937 -24201068 - Tigger1 DNA MER2_type -1825 593 1 648 304 98 30 chr20 42467538 42468633 -24199372 + L1ME LINE L1 4146 5360 -786 271 302 91 24 chr20 42468664 42468916 -24199089 + L1ME LINE L1 5390 5658 -504 267 278 10 21 chr20 42470201 42470298 -24197707 + MLT1K LTR MaLR 480 575 -13 463 291 89 14 chr20 42470741 42470954 -24197051 + MIR SINE MIR 21 249 -13 451 268 119 82 chr20 42472520 42472997 -24195008 + L1ME LINE L1 5265 5759 -362 233 353 92 20 chr20 42473582 42473831 -24194174 - L2 LINE L2 -675 2639 2373 269 163 0 0 chr20 42474022 42474065 -24193940 - L1PB3 LINE L1 -170 5984 5942 237 98 0 78 chr20 42474057 42474108 -24193897 + L1PB3 LINE L1 6108 6154 0 * 286 367 27 7 chr20 42474224 42474371 -24193634 + L2 LINE L2 3123 3272 0 1075 251 60 55 chr20 42474396 42474794 -24193211 + Tigger8 DNA MER2_type 248 647 -19 344 269 21 97 chr20 42475096 42475334 -24192671 - L2 LINE L2 -48 3265 3046 391 265 107 79 chr20 42475453 42475770 -24192235 + MLT1I LTR MaLR 71 396 -13 217 245 20 0 chr20 42475779 42475828 -24192177 - L2 LINE L2 -265 3048 2999 * 331 217 14 0 chr20 42475826 42475895 -24192110 - MIR SINE MIR -73 135 66 236 263 111 40 chr20 42476185 42476284 -24191721 - MIR SINE MIR -63 145 40 293 290 75 19 chr20 42476384 42476491 -24191514 - MIR SINE MIR -126 136 24 298 291 68 10 chr20 42476995 42477098 -24190907 - L2 LINE L2 -1 3312 3204 3834 104 50 9 chr20 42477788 42478348 -24189657 - L1PA13 LINE L1 -2 6161 5579 561 300 71 6 chr20 42479986 42480156 -24187849 + LTR33 LTR ERVL 71 251 -270 755 223 18 82 chr20 42480158 42480378 -24187627 - MER20 DNA MER1_type 0 219 14 261 246 18 0 chr20 42481828 42481885 -24186120 + MIR SINE MIR 87 144 -64 1627 241 46 24 chr20 42481921 42482423 -24185582 - L1ME3 LINE L1 -9 6153 5641 716 310 117 16 chr20 42482969 42483549 -24184456 + L1ME4a LINE L1 5255 5897 -224 1046 274 95 0 chr20 42483654 42483979 -24184026 - MLT1J2 LTR MaLR -45 405 50 1374 239 36 12 chr20 42484156 42484263 -24183742 - MER2 DNA MER2_type -2 343 240 2360 56 0 43 chr20 42484263 42484567 -24183438 + L1PA8 LINE L1 5874 6164 -8 1374 239 36 12 chr20 42484567 42484794 -24183211 - MER2 DNA MER2_type -105 240 1 228 276 146 8 chr20 42485736 42485859 -24182146 + MLT1J LTR MaLR 1 140 -371 349 21 43 0 chr20 42485878 42485925 -24182080 + L1PA4 LINE L1 6106 6154 -1 1753 174 23 0 chr20 42485934 42486233 -24181772 - AluJb SINE Alu -6 306 1 357 117 0 50 chr20 42486233 42486293 -24181712 - L1MC1 LINE L1 -10 6323 6267 398 282 53 44 chr20 42486300 42486506 -24181499 + MLT1J1 LTR MaLR 107 314 -132 874 209 114 35 chr20 42486531 42486785 -24181220 + L1MD3 LINE L1 7721 7994 -1 2275 99 0 7 chr20 42486794 42487097 -24180908 + AluSq SINE Alu 1 301 -12 247 359 84 0 chr20 42487197 42487328 -24180677 + L2 LINE L2 2962 3103 -169 2317 99 0 0 chr20 42487768 42488071 -24179934 - AluSg1 SINE Alu -6 303 1 431 328 26 31 chr20 42488078 42488270 -24179735 - MIR SINE MIR -12 250 60 2277 113 3 3 chr20 42488572 42488882 -24179123 + AluSg SINE Alu 1 310 0 279 0 0 0 chr20 42488886 42488917 -24179088 + (TA)n Simple_repeat Simple_repeat 1 31 0 378 226 87 9 chr20 42488935 42489050 -24178955 - MIR SINE MIR -34 228 105 423 313 8 23 chr20 42489099 42489230 -24178775 + L2 LINE L2 3139 3267 -5 187 206 63 32 chr20 42489418 42489481 -24178524 + L3 LINE CR1 283 347 -1230 288 314 76 0 chr20 42489752 42489857 -24178148 - MIR SINE MIR -119 143 31 205 195 24 0 chr20 42490494 42490535 -24177470 + GA-rich Low_complexity Low_complexity 1 42 0 856 132 5 157 chr20 42490549 42490786 -24177219 - MLT1D LTR MaLR -309 196 4 1473 163 28 0 chr20 42491126 42491376 -24176629 + MLT1D LTR MaLR 261 505 0 476 254 16 25 chr20 42491396 42491518 -24176487 - L1ME LINE L1 -444 5677 5557 344 330 16 16 chr20 42491583 42491765 -24176240 + L2 LINE L2 2551 2732 -582 1738 214 26 3 chr20 42491770 42492116 -24175889 - MLT1A1 LTR MaLR -11 354 1 329 315 73 51 chr20 42492168 42492441 -24175564 + L2 LINE L2 2813 3091 -181 584 239 97 58 chr20 42492506 42492732 -24175273 - L1ME3A LINE L1 -2 6168 5934 408 258 126 42 chr20 42492737 42492904 -24175101 + L2 LINE L2 3133 3313 0 2362 81 3 7 chr20 42493542 42493850 -24174155 - AluSg1 SINE Alu -1 308 2 2061 115 39 58 chr20 42494507 42494889 -24173116 + THE1C LTR MaLR 1 375 0 547 162 45 72 chr20 42495361 42495472 -24172533 - MER58B DNA MER1_type 0 341 234 670 289 32 18 chr20 42495558 42495842 -24172163 + L2 LINE L2 2507 2794 -520 274 311 222 34 chr20 42495948 42496241 -24171764 + L2 LINE L2 2919 3266 -6 183 162 0 0 chr20 42496598 42496635 -24171370 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 279 0 0 0 chr20 42497642 42497673 -24170332 + (TG)n Simple_repeat Simple_repeat 2 32 0 423 0 0 0 chr20 42497728 42497775 -24170230 + (TG)n Simple_repeat Simple_repeat 2 48 0 250 321 75 0 chr20 42497910 42498016 -24169989 - MIR SINE MIR -56 152 39 326 331 6 41 chr20 42498073 42498242 -24169763 - MIR SINE MIR -71 191 29 1858 231 92 60 chr20 42498266 42498723 -24169282 + L2 LINE L2 2313 2754 -559 11576 32 5 1 chr20 42498723 42500794 -24167211 - L1PA4 LINE L1 -11 6144 4069 1858 231 92 60 chr20 42500794 42501306 -24166699 + L2 LINE L2 2754 3305 -8 222 287 203 42 chr20 42502259 42502402 -24165603 + MER91A DNA MER1_type 3 168 -28 239 226 0 0 chr20 42503388 42503441 -24164564 + (CA)n Simple_repeat Simple_repeat 2 54 0 248 278 19 46 chr20 42503541 42503649 -24164356 - L1ME3A LINE L1 -320 5801 5697 1382 189 23 23 chr20 42503765 42504029 -24163976 + MLT1H1 LTR MaLR 244 507 -48 1266 247 36 93 chr20 42504051 42504625 -24163380 + L2 LINE L2 2775 3313 0 480 338 24 35 chr20 42504635 42504962 -24163043 - L1ME3A LINE L1 -423 5698 5373 413 244 67 8 chr20 42504966 42505085 -24162920 + L2 LINE L2 3188 3313 0 533 245 58 7 chr20 42505347 42505486 -24162519 - MIR SINE MIR -1 261 116 290 279 0 12 chr20 42505700 42505786 -24162219 + (CATA)n Simple_repeat Simple_repeat 4 88 0 268 248 208 7 chr20 42506464 42506613 -24161392 - L1MC4a LINE L1 -1852 5956 5778 202 262 0 16 chr20 42507405 42507466 -24160539 + (CCCCAG)n Simple_repeat Simple_repeat 4 63 0 318 236 124 81 chr20 42507648 42507809 -24160196 + MIR SINE MIR 47 214 -48 1044 175 21 118 chr20 42507897 42507966 -24160039 + MER33 DNA MER1_type 1 75 -2510 1953 139 10 16 chr20 42507966 42508269 -24159736 + AluSx SINE Alu 1 301 -11 1044 175 21 118 chr20 42508269 42508531 -24159474 + MER33 DNA MER1_type 75 300 -24 600 292 120 9 chr20 42508605 42508821 -24159184 - MIR SINE MIR -2 260 21 1764 226 115 48 chr20 42509664 42510222 -24157783 + MLT1G1 LTR MaLR 1 595 0 354 311 42 92 chr20 42510222 42510505 -24157500 - L2 LINE L2 -27 3245 2977 432 0 0 0 chr20 42510732 42510780 -24157225 + (TG)n Simple_repeat Simple_repeat 2 49 0 2353 76 13 0 chr20 42511777 42512079 -24155926 - AluY SINE Alu -5 306 1 224 246 87 87 chr20 42512969 42513095 -24154910 - L3 LINE CR1 -6 1571 1446 184 352 38 9 chr20 42513095 42513200 -24154805 + L2 LINE L2 2957 3064 -249 1123 168 27 32 chr20 42515073 42515293 -24152712 - MER20 DNA MER1_type 0 219 1 298 289 122 31 chr20 42516429 42516716 -24151289 + L1MB3 LINE L1 5266 5578 -2230 1894 178 209 65 chr20 42516724 42517193 -24150812 - MLT1E1 LTR MaLR 0 654 87 2459 145 41 10 chr20 42517193 42517607 -24150398 + MSTA LTR MaLR 2 428 0 1894 178 209 65 chr20 42517607 42517705 -24150300 - MLT1E1 LTR MaLR -567 87 5 214 348 70 27 chr20 42518527 42518714 -24149291 + L2 LINE L2 3045 3239 -33 23 33 0 0 chr20 42519890 42519920 -24148085 + AT_rich Low_complexity Low_complexity 1 30 0 1897 172 0 0 chr20 42519922 42520244 -24147761 - AluSx SINE Alu 0 312 1 24 0 0 0 chr20 42520247 42520271 -24147734 + AT_rich Low_complexity Low_complexity 1 24 0 2297 201 26 0 chr20 42520273 42520730 -24147275 - L1PB4 LINE L1 -2 6154 5686 266 181 24 24 chr20 42521490 42521573 -24146432 + (TAAA)n Simple_repeat Simple_repeat 3 85 0 741 299 17 4 chr20 42522245 42522476 -24145529 - MIR SINE MIR -21 241 8 382 311 23 15 chr20 42522569 42522701 -24145304 + MIR SINE MIR 20 152 -110 758 273 79 84 chr20 42522834 42523497 -24144508 - L2 LINE L2 0 3313 2658 356 328 17 0 chr20 42525605 42525721 -24142284 - MER5A DNA MER1_type -1 188 71 203 260 87 55 chr20 42525627 42525754 -24142251 + MER5A DNA MER1_type 35 165 -24 * 232 188 0 0 chr20 42526232 42526280 -24141725 - L2 LINE L2 -4 3309 3262 336 191 0 0 chr20 42526393 42526456 -24141549 - MIR SINE MIR -112 150 88 2476 176 32 2 chr20 42526708 42527179 -24140826 + L1MB3 LINE L1 5699 6183 0 288 277 84 2 chr20 42527833 42527955 -24140050 - MIR SINE MIR -60 148 21 519 274 72 63 chr20 42528319 42528775 -24139230 - MLT1G LTR MaLR -86 444 1 2137 139 0 0 chr20 42528876 42529178 -24138827 - AluSx SINE Alu -10 302 1 266 335 25 19 chr20 42529225 42529386 -24138619 - MIR3 SINE MIR -32 176 15 183 254 17 17 chr20 42529830 42529889 -24138116 + L3b LINE CR1 1326 1384 -199 920 128 0 0 chr20 42530191 42530324 -24137681 - FLAM_C SINE Alu 0 133 1 3110 186 63 19 chr20 42530482 42531177 -24136828 - L1MB8 LINE L1 -5 6173 5448 321 285 58 15 chr20 42531177 42531314 -24136691 - MIR SINE MIR -52 210 68 611 223 191 38 chr20 42532573 42532892 -24135113 + L1ME4a LINE L1 5724 6091 -30 2430 167 13 36 chr20 42533747 42534196 -24133809 - MLT1C LTR MaLR 0 467 29 224 276 31 31 chr20 42534370 42534468 -24133537 + L2 LINE L2 1333 1430 -1884 1190 126 10 55 chr20 42534509 42534708 -24133297 - THE1B LTR MaLR 0 364 175 43433 36 21 1 chr20 42534742 42540772 -24127233 - L1PA2 LINE L1 -2 6153 1 1235 106 28 11 chr20 42540772 42540952 -24127053 - THE1B LTR MaLR -181 183 1 335 332 197 9 chr20 42540991 42541650 -24126355 + L2 LINE L2 1536 2318 -996 2387 75 3 0 chr20 42542050 42542344 -24125661 - AluY SINE Alu -16 295 1 1225 197 4 32 chr20 42542598 42542847 -24125158 + LTR1B LTR ERV1 1 242 -584 2008 179 136 0 chr20 42542848 42543268 -24124737 + LTR1B LTR ERV1 350 826 0 204 67 0 0 chr20 42543810 42543840 -24124165 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 189 103 0 0 chr20 42543887 42543916 -24124089 - L2 LINE L2 -38 3275 3247 1468 174 77 33 chr20 42547077 42547376 -24120629 - AluJo SINE Alu 0 312 1 191 143 0 24 chr20 42548331 42548373 -24119632 + (TCCA)n Simple_repeat Simple_repeat 4 44 0 409 294 49 57 chr20 42548386 42548529 -24119476 - MIR SINE MIR -16 246 104 931 179 129 15 chr20 42548529 42548730 -24119275 + MER58A DNA MER1_type 1 224 0 409 294 49 57 chr20 42548730 42548831 -24119174 - MIR SINE MIR -158 104 4 2573 175 47 17 chr20 42549755 42550224 -24117781 + MLT1D LTR MaLR 23 505 0 953 282 61 21 chr20 42551230 42551560 -24116445 - LTR16A LTR ERVL -5 445 103 216 0 0 0 chr20 42551566 42551590 -24116415 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 1780 206 75 85 chr20 42551601 42552043 -24115962 + MER77 LTR ERV1 11 449 -156 2082 109 49 0 chr20 42552043 42552327 -24115678 - AluSg SINE Alu -12 298 1 1780 206 75 85 chr20 42552327 42552390 -24115615 + MER77 LTR ERV1 449 511 -94 241 184 39 48 chr20 42552392 42552495 -24115510 + (TTATA)n Simple_repeat Simple_repeat 3 104 0 620 206 32 0 chr20 42552498 42552624 -24115381 + MER77 LTR ERV1 476 605 0 305 315 34 0 chr20 42552624 42552713 -24115292 - LTR16A LTR ERVL -343 107 16 1604 160 48 11 chr20 42553318 42553586 -24114419 + AluSx SINE Alu 1 278 -34 373 76 97 0 chr20 42553589 42553733 -24114272 + (TA)n Simple_repeat Simple_repeat 2 159 0 652 19 107 0 chr20 42553750 42553909 -24114096 + (TA)n Simple_repeat Simple_repeat 2 177 0 192 45 23 45 chr20 42553913 42553957 -24114048 + (TATAA)n Simple_repeat Simple_repeat 2 44 0 550 223 82 114 chr20 42554162 42554346 -24113659 + MLT1J2 LTR MaLR 245 426 -24 291 253 24 12 chr20 42554746 42554829 -24113176 + L2 LINE L2 3188 3271 -1 2137 133 3 0 chr20 42556308 42556594 -24111411 + AluSx SINE Alu 1 290 -22 222 37 0 0 chr20 42556594 42556621 -24111384 + (TTAA)n Simple_repeat Simple_repeat 2 28 0 842 258 0 0 chr20 42556851 42557033 -24110972 - MER5A DNA MER1_type -7 182 1 1063 287 70 21 chr20 42557068 42557593 -24110412 + L2 LINE L2 2744 3313 0 667 264 0 0 chr20 42557784 42557928 -24110077 - MER63A DNA MER1_type -24 186 43 217 293 201 0 chr20 42559815 42559979 -24108026 + L2 LINE L2 1758 1954 -1360 1612 134 69 0 chr20 42560211 42560457 -24107548 - AluSg SINE Alu -23 287 25 186 95 95 95 chr20 42560648 42560690 -24107315 + MER5A DNA MER1_type 45 86 -103 927 281 82 6 chr20 42560729 42561095 -24106910 - L1ME4a LINE L1 -206 5915 5522 192 259 19 0 chr20 42561633 42561687 -24106318 + MIR SINE MIR 18 72 -136 300 250 23 0 chr20 42562147 42562235 -24105770 + MIR SINE MIR 64 153 -109 215 255 0 0 chr20 42562259 42562310 -24105695 + (TAA)n Simple_repeat Simple_repeat 2 52 0 222 301 96 0 chr20 42562334 42562417 -24105588 - MIR SINE MIR -22 240 150 620 280 64 38 chr20 42562660 42562896 -24105109 + MLT1H LTR MaLR 106 347 -202 450 274 56 51 chr20 42563035 42563120 -24104885 - MIR SINE MIR -38 224 141 1823 176 17 3 chr20 42563120 42563421 -24104584 - AluJb SINE Alu -7 305 1 450 274 56 51 chr20 42563421 42563550 -24104455 - MIR SINE MIR -121 141 9 188 345 99 18 chr20 42563970 42564141 -24103864 + L2 LINE L2 2565 2749 -565 246 232 0 0 chr20 42564718 42564774 -24103231 - MIR SINE MIR -112 150 95 864 231 206 18 chr20 42565092 42565373 -24102632 + LTR16C LTR ERVL 158 491 0 366 61 0 0 chr20 42565559 42565608 -24102397 + (TG)n Simple_repeat Simple_repeat 2 50 0 198 327 0 37 chr20 42565728 42565835 -24102170 + MIR SINE MIR 156 258 -4 291 307 31 61 chr20 42565835 42566063 -24101942 + LTR16A1 LTR ERVL 1 221 -236 966 214 46 0 chr20 42566104 42566300 -24101705 + MER58A DNA MER1_type 16 220 -4 971 221 25 0 chr20 42566311 42566515 -24101490 - MER3 DNA MER1_type 0 209 1 302 252 113 0 chr20 42566569 42566684 -24101321 + LTR16A1 LTR ERVL 330 457 0 1802 163 10 13 chr20 42566688 42567001 -24101004 - AluJo SINE Alu 0 312 1 265 279 13 0 chr20 42567110 42567189 -24100816 + L2 LINE L2 3192 3271 -1 2579 91 5 57 chr20 42568534 42568604 -24099401 - THE1B LTR MaLR 0 364 292 2407 78 0 25 chr20 42568604 42568923 -24099082 - AluY SINE Alu 0 311 1 2579 91 5 57 chr20 42568923 42569236 -24098769 - THE1B LTR MaLR -72 292 1 432 189 183 67 chr20 42569802 42569966 -24098039 - MLT1J LTR MaLR -327 184 2 263 213 238 12 chr20 42569972 42570052 -24097953 - MIR SINE MIR -118 144 47 340 285 83 11 chr20 42571161 42571349 -24096656 - MIR SINE MIR -11 251 50 411 258 57 8 chr20 42571444 42571568 -24096437 + MIR SINE MIR 22 151 -111 2309 115 0 3 chr20 42571569 42571882 -24096123 + AluSx SINE Alu 1 312 0 180 310 0 42 chr20 42572750 42572821 -24095184 - L2 LINE L2 -23 3249 3182 2662 97 19 11 chr20 42572824 42573196 -24094809 + THE1C LTR MaLR 1 375 0 474 303 58 14 chr20 42574421 42574629 -24093376 - MIR SINE MIR -4 258 42 2170 117 0 13 chr20 42575012 42575312 -24092693 + AluSx SINE Alu 1 296 -16 323 292 108 20 chr20 42576416 42576611 -24091394 + L1ME4a LINE L1 5593 5804 -317 2475 121 11 0 chr20 42576746 42577117 -24090888 + THE1C LTR MaLR 1 375 0 216 356 93 5 chr20 42577155 42577371 -24090634 + L2 LINE L2 1973 2207 -1107 1180 179 80 87 chr20 42577377 42577802 -24090203 + LTR37A LTR ERV1 5 426 0 3069 215 26 28 chr20 42577873 42578519 -24089486 + MER82 DNA MER2_type 5 649 -4 235 265 48 42 chr20 42578744 42578910 -24089095 + L1ME4a LINE L1 5944 6110 -11 237 277 96 6 chr20 42579748 42579914 -24088091 + MIR SINE MIR 33 211 -51 335 300 80 27 chr20 42580451 42580601 -24087404 - L2 LINE L2 0 3313 3156 2164 128 3 0 chr20 42580647 42580953 -24087052 - AluSg SINE Alu -3 307 1 183 243 0 0 chr20 42582107 42582144 -24085861 - L2 LINE L2 -19 3253 3217 329 239 167 7 chr20 42582164 42582302 -24085703 + MIR SINE MIR 16 175 -87 254 308 60 8 chr20 42582380 42582497 -24085508 - MIR SINE MIR -90 172 50 276 30 0 0 chr20 42582771 42582804 -24085201 + (TG)n Simple_repeat Simple_repeat 2 34 0 236 250 15 15 chr20 42582808 42582876 -24085129 - L1MC4 LINE L1 -1339 6703 6636 648 256 28 43 chr20 42583527 42583781 -24084224 - L1ME4a LINE L1 -223 5898 5649 308 333 133 14 chr20 42583786 42584080 -24083925 - L1ME4a LINE L1 -2224 5584 5256 674 111 20 0 chr20 42584440 42584539 -24083466 - AluJo SINE Alu -177 135 35 7633 25 9 0 chr20 42584559 42585910 -24082095 + L1PA4 LINE L1 4799 6155 0 181 323 104 10 chr20 42585983 42586079 -24081926 + MIR SINE MIR 152 256 -6 518 270 87 54 chr20 42586322 42586714 -24081291 - L1ME4a LINE L1 -1488 4658 4254 608 283 8 33 chr20 42586772 42587012 -24080993 - L1ME4a LINE L1 -2155 3991 3758 230 289 151 30 chr20 42587044 42587210 -24080795 + MIR SINE MIR 50 235 -27 1308 215 68 15 chr20 42587473 42587798 -24080207 - LTR36 LTR ERV1 0 611 270 651 192 97 25 chr20 42587811 42588005 -24080000 - LTR36 LTR ERV1 -376 234 1 2432 48 0 61 chr20 42588498 42588809 -24079196 - AluY SINE Alu -14 297 6 195 288 0 27 chr20 42589364 42589437 -24078568 - MIR SINE MIR -89 173 103 235 328 68 34 chr20 42590065 42590242 -24077763 - MIR SINE MIR -60 202 20 250 318 0 0 chr20 42591108 42591196 -24076809 + L3 LINE CR1 1386 1473 -104 182 253 229 12 chr20 42591751 42591834 -24076171 + L2 LINE L2 2260 2360 -954 3485 75 23 0 chr20 42591876 42592319 -24075686 + MLT2A2 LTR ERVL 1 453 0 226 242 0 30 chr20 42592748 42592814 -24075191 + L2 LINE L2 3208 3271 -1 714 225 16 39 chr20 42593127 42593264 -24074741 - MER5A DNA MER1_type -11 178 44 1871 194 73 3 chr20 42593264 42593605 -24074400 - MLT1A1 LTR MaLR 0 365 1 714 225 16 39 chr20 42593605 42593649 -24074356 - MER5A DNA MER1_type -145 44 1 5266 129 32 9 chr20 42595053 42595891 -24072114 - Tigger4(Zombi) DNA MER2_type -3 2728 1872 445 250 0 0 chr20 42595882 42595974 -24072031 - Tigger4(Zombi) DNA MER2_type -2639 92 1 * 234 0 0 0 chr20 42596343 42596369 -24071636 + (TC)n Simple_repeat Simple_repeat 2 27 0 187 395 9 35 chr20 42596402 42596516 -24071489 + MIR SINE MIR 33 143 -65 2149 124 0 9 chr20 42598093 42598408 -24069597 - AluSx SINE Alu 0 312 1 239 300 12 0 chr20 42599299 42599379 -24068626 + A-rich Low_complexity Low_complexity 5 85 0 499 293 79 30 chr20 42599492 42599758 -24068247 - L1ME4a LINE L1 -237 5884 5606 374 352 60 30 chr20 42600106 42600404 -24067601 - L3 LINE CR1 -1195 382 76 898 210 72 40 chr20 42601631 42601907 -24066098 + L1ME2 LINE L1 5783 6067 -97 322 298 144 6 chr20 42601911 42602092 -24065913 + L1ME2 LINE L1 5959 6164 0 2041 128 0 0 chr20 42603069 42603382 -24064623 - AluSx SINE Alu 0 313 1 2112 118 28 0 chr20 42603875 42604162 -24063843 + AluSx SINE Alu 1 295 -17 339 321 35 77 chr20 42604362 42604648 -24063357 + HAL1b LINE L1 169 440 -908 276 286 39 10 chr20 42604742 42604899 -24063106 - MIR SINE MIR -42 220 7 603 254 66 96 chr20 42606079 42606276 -24061729 + LTR16C LTR ERVL 164 348 -143 2369 81 0 34 chr20 42606276 42606596 -24061409 - AluSc SINE Alu 0 309 1 603 254 66 96 chr20 42606596 42606732 -24061273 + LTR16C LTR ERVL 348 487 -4 499 266 21 7 chr20 42606748 42606891 -24061114 + MIR SINE MIR 93 237 -25 310 305 51 0 chr20 42607681 42607799 -24060206 - MIR SINE MIR -21 241 118 535 263 165 22 chr20 42607802 42608026 -24059979 + LTR50 LTR ERVL 1 256 -539 426 277 87 2 chr20 42608153 42608409 -24059596 + LTR33A LTR ERVL 320 521 -2 468 242 133 0 chr20 42608413 42608541 -24059464 - MIR SINE MIR -101 161 17 2237 178 49 28 chr20 42608826 42609293 -24058712 + LTR1B LTR ERV1 1 477 -349 354 188 29 0 chr20 42609300 42609369 -24058636 + LTR1B LTR ERV1 756 826 0 1447 183 222 26 chr20 42609379 42609794 -24058211 + MLT1D LTR MaLR 10 505 0 347 303 59 0 chr20 42610576 42610695 -24057310 + MIR SINE MIR 65 190 -72 1565 293 91 8 chr20 42611907 42612634 -24055371 + L1M4 LINE L1 3543 4329 -1817 537 281 50 66 chr20 42612636 42612878 -24055127 + L1ME3 LINE L1 5925 6162 -8 1248 271 50 53 chr20 42612886 42613599 -24054406 + L1M4 LINE L1 4374 5084 -1062 2546 199 78 56 chr20 42613627 42613831 -24054174 - L1MD2 LINE L1 -301 6058 5860 2581 74 0 0 chr20 42613831 42614142 -24053863 - AluY SINE Alu 0 311 1 2546 199 78 56 chr20 42614142 42614601 -24053404 - L1MD2 LINE L1 -499 5860 5380 484 228 73 23 chr20 42614602 42614766 -24053239 - MLT1F1 LTR MaLR -68 525 317 379 81 0 16 chr20 42614785 42614847 -24053158 + AluJ/FLAM SINE Alu 1 61 -241 894 219 62 4 chr20 42614847 42615089 -24052916 - L1MD2 LINE L1 -797 5349 5094 524 277 29 18 chr20 42615722 42615912 -24052093 + MLT1F1 LTR MaLR 10 198 -369 242 273 27 15 chr20 42615913 42616175 -24051830 + CT-rich Low_complexity Low_complexity 1 265 0 2347 91 0 0 chr20 42616263 42616559 -24051446 - AluY SINE Alu -15 296 1 586 256 120 17 chr20 42616572 42616806 -24051199 + MLT1F1 LTR MaLR 310 567 0 207 204 0 0 chr20 42616922 42616966 -24051039 + A-rich Low_complexity Low_complexity 1 44 0 601 258 66 0 chr20 42618333 42618500 -24049505 + MER5B DNA MER1_type 1 178 0 181 241 69 17 chr20 42618509 42618567 -24049438 - L2 LINE L2 0 3272 3212 333 125 0 0 chr20 42618644 42618700 -24049305 + (TGAA)n Simple_repeat Simple_repeat 3 58 0 185 233 165 39 chr20 42619499 42619602 -24048403 + L2 LINE L2 3117 3232 -40 400 248 87 7 chr20 42620462 42620611 -24047394 + MIR3 SINE MIR 23 183 -25 228 263 105 0 chr20 42621702 42621778 -24046227 - MIR SINE MIR -118 144 61 240 297 25 17 chr20 42622488 42622606 -24045399 - MIR3 SINE MIR -35 173 55 345 257 92 48 chr20 42622681 42622903 -24045102 + MLT1K LTR MaLR 13 231 -357 237 146 0 0 chr20 42623003 42623051 -24044954 + (GA)n Simple_repeat Simple_repeat 1 48 0 249 108 31 31 chr20 42623178 42623243 -24044762 + A-rich Low_complexity Low_complexity 5 69 0 284 273 20 30 chr20 42623425 42623524 -24044481 - MIR3 SINE MIR -28 180 83 2254 253 48 7 chr20 42623643 42624233 -24043772 + MER90 LTR ERV1 1 614 0 2105 126 3 0 chr20 42624728 42625014 -24042991 + AluSp SINE Alu 1 287 -26 579 243 7 26 chr20 42625030 42625182 -24042823 - LTR7 LTR ERV1 0 450 302 270 214 179 34 chr20 42625826 42625943 -24042062 + LTR33A LTR ERVL 57 190 -333 459 35 0 0 chr20 42625944 42625980 -24042025 + (TG)n Simple_repeat Simple_repeat 1 93 0 459 35 0 0 chr20 42625980 42626037 -24041968 + (TG)n Simple_repeat Simple_repeat 2 58 0 349 204 68 53 chr20 42626106 42626238 -24041767 + LTR33A LTR ERVL 384 517 -6 2036 156 43 63 chr20 42626582 42627044 -24040961 + MLT1C LTR MaLR 13 465 -2 2111 222 160 108 chr20 42627066 42627476 -24040529 + MLT1E3 LTR MaLR 5 429 -195 653 221 0 8 chr20 42627476 42627603 -24040402 + FLAM_A SINE Alu 1 126 -7 2111 222 160 108 chr20 42627603 42627810 -24040195 + MLT1E3 LTR MaLR 429 624 0 22 35 0 0 chr20 42628062 42628091 -24039914 + AT_rich Low_complexity Low_complexity 1 29 0 224 270 48 40 chr20 42628565 42628691 -24039314 + MIR SINE MIR 59 185 -77 584 275 40 13 chr20 42628889 42629038 -24038967 + MLT1I LTR MaLR 104 256 -153 2131 176 69 10 chr20 42629049 42629441 -24038564 + MSTB LTR MaLR 12 426 0 8997 181 18 10 chr20 42629441 42631079 -24036926 + MSTB-int LTR MaLR 1 1651 0 2146 163 72 17 chr20 42631079 42631483 -24036522 + MSTB LTR MaLR 1 426 0 309 229 115 25 chr20 42631498 42631620 -24036385 + MLT1I LTR MaLR 277 409 0 358 343 21 7 chr20 42631629 42631769 -24036236 - MIR SINE MIR -111 151 10 209 351 90 0 chr20 42632319 42632453 -24035552 + MIR3 SINE MIR 38 183 -25 1242 263 127 17 chr20 42632481 42632931 -24035074 + L1MC4a LINE L1 5521 6053 -1755 387 105 0 0 chr20 42632931 42632988 -24035017 + (CA)n Simple_repeat Simple_repeat 2 58 0 1242 263 127 17 chr20 42632988 42633127 -24034878 + L1MC4a LINE L1 6053 6175 -1633 2594 159 21 2 chr20 42633429 42633849 -24034156 + MSTA LTR MaLR 1 428 0 246 331 39 33 chr20 42633850 42634031 -24033974 + MIR3 SINE MIR 27 208 0 620 283 79 58 chr20 42634346 42635724 -24032281 + L1MEc LINE L1 34 4768 -1447 411 165 24 35 chr20 42635741 42635826 -24032179 + L1MC1 LINE L1 6250 6333 0 3369 34 2 0 chr20 42636059 42636497 -24031508 - L1PA4 LINE L1 -504 5651 5213 4272 31 0 0 chr20 42636497 42637020 -24030985 + L1PA4 LINE L1 5649 6171 0 1382 244 147 45 chr20 42637021 42638060 -24029945 + L1MEc LINE L1 4771 5948 -291 2380 77 0 13 chr20 42638060 42638371 -24029634 + AluY SINE Alu 1 307 -4 1382 244 147 45 chr20 42638371 42638608 -24029397 + L1MEc LINE L1 5948 6159 -80 250 383 86 10 chr20 42638930 42639243 -24028762 - L2 LINE L2 -966 2348 2012 386 250 34 61 chr20 42639326 42639474 -24028531 + MIR SINE MIR 78 221 -41 311 225 176 0 chr20 42640076 42640167 -24027838 - MIR SINE MIR -22 186 79 380 147 266 37 chr20 42641965 42642074 -24025931 - MER5A DNA MER1_type -29 160 27 523 269 154 6 chr20 42642454 42642636 -24025369 + MER3 DNA MER1_type 1 209 0 399 290 44 83 chr20 42642743 42642995 -24025010 + MIR SINE MIR 12 253 -9 202 341 45 0 chr20 42643710 42643798 -24024207 + MIR SINE MIR 30 121 -87 401 277 107 0 chr20 42643874 42643986 -24024019 - L2 LINE L2 0 3313 3190 387 326 62 31 chr20 42644089 42644282 -24023723 + LTR33 LTR ERVL 14 212 -309 528 233 31 0 chr20 42644326 42644455 -24023550 + LTR33 LTR ERVL 323 455 -66 638 235 0 0 chr20 42644460 42644579 -24023426 + FRAM SINE Alu 5 123 -53 941 215 24 5 chr20 42644609 42644814 -24023191 - MLT1D LTR MaLR -270 235 27 297 0 0 0 chr20 42644814 42644847 -24023158 + (TG)n Simple_repeat Simple_repeat 2 34 0 1614 99 5 0 chr20 42644847 42645059 -24022946 - AluSq SINE Alu -28 285 73 227 95 48 0 chr20 42645060 42645102 -24022903 + AluJo/FRAM SINE Alu 256 299 0 256 232 59 2 chr20 42645263 42645337 -24022668 - MIR SINE MIR -57 151 82 331 151 3 11 chr20 42645405 42645471 -24022534 - MLT1D LTR MaLR -2 503 450 1715 62 0 0 chr20 42645471 42645681 -24022324 + L1P4 LINE L1 5492 5701 -467 830 189 27 86 chr20 42645685 42645862 -24022143 - MLT1D LTR MaLR -296 209 45 2015 135 4 0 chr20 42645862 42646183 -24021822 - AluSq SINE Alu 0 322 1 830 189 27 86 chr20 42646183 42646226 -24021779 - MLT1D LTR MaLR -460 45 1 279 272 40 48 chr20 42646337 42646462 -24021543 + MIR SINE MIR 28 151 -111 264 259 76 65 chr20 42647533 42647718 -24020287 + L2 LINE L2 2677 2863 -451 661 222 56 6 chr20 42648003 42648183 -24019822 - MER5A DNA MER1_type 0 189 1 194 333 71 0 chr20 42648225 42648324 -24019681 - MIR3 SINE MIR -94 114 9 220 252 130 41 chr20 42648374 42648497 -24019508 - MIR SINE MIR -48 214 81 243 291 78 0 chr20 42649757 42649860 -24018145 - MIR SINE MIR -27 235 125 885 278 88 23 chr20 42650483 42650835 -24017170 + LTR16A LTR ERVL 83 457 0 404 348 66 8 chr20 42651518 42651769 -24016236 + L2 LINE L2 2790 3052 -220 898 207 9 38 chr20 42651904 42652117 -24015888 - MER3 DNA MER1_type -2 207 1 188 371 86 13 chr20 42652270 42652421 -24015584 - L2 LINE L2 -179 3093 2932 192 193 70 18 chr20 42654360 42654417 -24013588 + MIR SINE MIR 127 186 -76 411 323 62 34 chr20 42654461 42654752 -24013253 - MLT1I LTR MaLR -32 377 79 218 283 0 0 chr20 42655718 42655778 -24012227 + MIR SINE MIR 97 156 -106 265 270 0 0 chr20 42656043 42656106 -24011899 - L2 LINE L2 -286 2986 2924 371 250 116 9 chr20 42656242 42656354 -24011651 - L2 LINE L2 -1 3271 3148 2231 188 19 21 chr20 42656846 42657153 -24010852 + MLT1C LTR MaLR 1 308 -159 2229 108 0 3 chr20 42657153 42657448 -24010557 + AluSx SINE Alu 1 294 -18 2231 188 19 21 chr20 42657448 42657608 -24010397 + MLT1C LTR MaLR 308 467 0 222 301 77 21 chr20 42657793 42657936 -24010069 - MIR SINE MIR -65 197 47 2113 129 14 0 chr20 42658035 42658329 -24009676 + AluSx SINE Alu 1 298 -14 313 355 41 6 chr20 42658336 42658508 -24009497 + L2 LINE L2 3132 3309 -4 1856 148 44 3 chr20 42658594 42658891 -24009114 + AluJb SINE Alu 1 309 -3 262 261 21 31 chr20 42659083 42659201 -24008804 + GA-rich Low_complexity Low_complexity 2 193 0 366 346 64 52 chr20 42659709 42660226 -24007779 + MLT1K LTR MaLR 62 584 -4 2326 103 0 3 chr20 42661148 42661450 -24006555 - AluSq SINE Alu -12 301 1 503 259 134 30 chr20 42662207 42662439 -24005566 - MLT1J2 LTR MaLR -76 374 119 239 324 70 16 chr20 42662556 42662741 -24005264 - MIR SINE MIR -52 210 16 807 295 116 23 chr20 42664377 42664723 -24003282 - MLT1J2 LTR MaLR 0 450 73 1125 185 20 5 chr20 42665169 42665369 -24002636 - MER20 DNA MER1_type -16 203 1 1005 281 78 50 chr20 42667111 42667816 -24000189 - L2 LINE L2 -8 3305 2584 943 210 58 5 chr20 42667816 42668021 -23999984 + MER58A DNA MER1_type 5 220 -4 1005 281 78 50 chr20 42668021 42668089 -23999916 - L2 LINE L2 -729 2584 2519 796 255 168 58 chr20 42668384 42668812 -23999193 + LTR16C LTR ERVL 1 475 -16 453 287 8 0 chr20 42669323 42669452 -23998553 + MIR SINE MIR 57 186 -76 232 149 95 14 chr20 42670100 42670174 -23997831 + (TATATG)n Simple_repeat Simple_repeat 2 81 0 279 353 15 15 chr20 42670204 42670340 -23997665 - MIR SINE MIR -111 151 16 1774 236 51 51 chr20 42671247 42671793 -23996212 + MLT2B3 LTR ERVL 1 546 -8 598 289 50 5 chr20 42672061 42672279 -23995726 - MIR SINE MIR -5 257 30 1786 100 0 0 chr20 42673998 42674227 -23993778 - AluSx SINE Alu -20 292 64 1129 113 0 25 chr20 42674227 42674387 -23993618 - AluSx SINE Alu -156 156 1 241 284 27 0 chr20 42674631 42674705 -23993300 - MER116 DNA Mariner 0 80 5 477 274 72 72 chr20 42674718 42675024 -23992981 - L2 LINE L2 -39 3274 2969 388 265 12 66 chr20 42675323 42675489 -23992516 + L1ME LINE L1 5508 5664 -457 1684 175 7 16 chr20 42676572 42676881 -23991124 + AluJo SINE Alu 1 306 -6 204 348 22 11 chr20 42678536 42678625 -23989380 + MIR SINE MIR 30 119 -89 260 266 73 40 chr20 42679064 42679188 -23988817 - MIR SINE MIR -14 248 121 933 65 0 0 chr20 42679188 42679296 -23988709 + AluY SINE Alu 1 108 -203 898 267 171 8 chr20 42679680 42680066 -23987939 - LTR16A1 LTR ERVL 0 457 9 243 0 0 0 chr20 42680185 42680212 -23987793 + (T)n Simple_repeat Simple_repeat 1 27 0 225 242 33 33 chr20 42680405 42680496 -23987509 - MIR SINE MIR -6 256 166 411 164 0 0 chr20 42680504 42680571 -23987434 + MER5A DNA MER1_type 7 73 -116 693 214 0 109 chr20 42680883 42680957 -23987048 + MER5A DNA MER1_type 4 84 -105 2377 90 3 0 chr20 42680957 42681268 -23986737 + AluSp SINE Alu 1 312 -1 693 214 0 109 chr20 42681268 42681394 -23986611 + MER5A DNA MER1_type 84 182 -7 282 243 0 14 chr20 42681387 42681457 -23986548 - MIR SINE MIR -94 168 100 * 293 246 303 0 chr20 42681470 42681612 -23986393 - MER5A DNA MER1_type -1 188 4 390 193 353 8 chr20 42682059 42682178 -23985827 - MER5A DNA MER1_type 0 189 30 228 179 0 18 chr20 42683262 42683318 -23984687 + A-rich Low_complexity Low_complexity 2 56 0 1153 174 0 5 chr20 42683725 42683909 -23984096 + LTR40a LTR ERVL 337 519 0 205 329 49 21 chr20 42683940 42684083 -23983922 - L2 LINE L2 -1322 1992 1846 343 299 27 33 chr20 42684380 42684600 -23983405 + MIR SINE MIR 19 235 -27 483 242 127 69 chr20 42685352 42685873 -23982132 - L1ME4a LINE L1 -28 6093 5543 1108 175 49 63 chr20 42686971 42687352 -23980653 + MLT2B1 LTR ERVL 1 469 -51 271 212 40 0 chr20 42687436 42687535 -23980470 + (TA)n Simple_repeat Simple_repeat 1 103 0 232 146 56 0 chr20 42687562 42687651 -23980354 + (TA)n Simple_repeat Simple_repeat 1 94 0 209 254 33 25 chr20 42687651 42687773 -23980232 + (TATAA)n Simple_repeat Simple_repeat 2 124 0 432 0 0 0 chr20 42687782 42687830 -23980175 + (CA)n Simple_repeat Simple_repeat 2 49 0 253 35 0 0 chr20 42687830 42687859 -23980146 + MLT2B1 LTR ERVL 487 515 0 2863 217 64 30 chr20 42689154 42689923 -23978082 + L1ME1 LINE L1 5367 6161 -5 1318 91 0 0 chr20 42689938 42690103 -23977902 - AluSq SINE Alu -24 289 125 496 238 10 0 chr20 42690862 42690963 -23977042 + LTR46 LTR ERV1 2 103 -357 400 238 112 14 chr20 42691047 42691190 -23976815 + LTR46 LTR ERV1 275 431 -29 474 282 67 24 chr20 42691486 42691695 -23976310 - MIR SINE MIR -9 253 36 330 313 97 0 chr20 42692008 42692152 -23975853 - MIR SINE MIR -21 241 84 520 288 47 43 chr20 42692594 42692827 -23975178 - MIR SINE MIR 0 262 29 264 289 67 0 chr20 42693158 42693262 -23974743 - MIR SINE MIR -14 248 138 546 285 113 81 chr20 42694004 42694411 -23973594 - Charlie8 DNA MER1_type -1997 420 1 1591 195 7 81 chr20 42696054 42696475 -23971530 + MLT1B LTR MaLR 1 390 0 386 216 18 30 chr20 42696485 42696652 -23971353 + (TA)n Simple_repeat Simple_repeat 1 165 0 401 284 62 12 chr20 42696686 42696848 -23971157 + L2 LINE L2 3144 3313 0 499 303 68 55 chr20 42697144 42697524 -23970481 + L2 LINE L2 2929 3313 0 25 31 0 0 chr20 42699556 42699588 -23968417 + AT_rich Low_complexity Low_complexity 1 32 0 184 361 12 0 chr20 42701553 42701636 -23966369 + L2 LINE L2 1869 1952 -1362 658 259 123 0 chr20 42701647 42701867 -23966138 + MIR SINE MIR 6 252 -10 259 250 44 64 chr20 42703073 42703277 -23964728 + L1M4 LINE L1 5188 5387 -759 1058 193 0 14 chr20 42704739 42704962 -23963043 + L1MA7 LINE L1 6071 6290 -1 223 216 40 0 chr20 42705593 42705667 -23962338 + CT-rich Low_complexity Low_complexity 1 77 0 2153 137 30 24 chr20 42705690 42706063 -23961942 + THE1C LTR MaLR 1 375 0 213 361 0 0 chr20 42706121 42706204 -23961801 - MIR SINE MIR -59 149 73 261 291 35 0 chr20 42706640 42706726 -23961279 + MIR SINE MIR 35 123 -85 1201 199 24 0 chr20 42706745 42706956 -23961049 + MER58A DNA MER1_type 1 216 -8 422 248 83 0 chr20 42707022 42707143 -23960862 + MER94 DNA DNA 1 131 -3 1108 225 22 41 chr20 42707501 42707817 -23960188 + MER46C DNA MER2_type 22 331 -7 227 292 0 34 chr20 42708186 42708275 -23959730 + CT-rich Low_complexity Low_complexity 2 87 0 334 239 0 0 chr20 42708745 42708816 -23959189 + Charlie5 DNA MER1_type 51 121 -2491 1554 190 26 6 chr20 42708840 42709187 -23958818 + Charlie5 DNA MER1_type 2263 2616 0 643 259 30 0 chr20 42709253 42709419 -23958586 + MIR SINE MIR 90 260 -2 572 292 6 6 chr20 42709857 42710035 -23957970 + L1MB8 LINE L1 6001 6178 0 192 321 167 0 chr20 42710217 42710301 -23957704 + MER5C DNA MER1_type 227 324 0 185 294 35 82 chr20 42710421 42710591 -23957414 + L2 LINE L2 2902 3063 -209 302 268 12 0 chr20 42710612 42710694 -23957311 + MIR SINE MIR 85 167 -95 314 288 64 8 chr20 42711399 42711524 -23956481 + MIR SINE MIR 81 212 -50 625 227 14 14 chr20 42711667 42711808 -23956197 + MLT1H LTR MaLR 29 169 -380 331 338 15 0 chr20 42712183 42712316 -23955689 + L3 LINE CR1 1337 1471 -106 189 121 0 0 chr20 42712684 42712717 -23955288 + (GA)n Simple_repeat Simple_repeat 1 33 0 1834 184 3 0 chr20 42712999 42713319 -23954686 - L1PB4 LINE L1 -12 6144 5824 596 191 37 44 chr20 42713973 42714109 -23953896 + MLT1J2 LTR MaLR 48 182 -268 416 266 158 6 chr20 42714145 42714303 -23953702 + MER5A DNA MER1_type 8 189 0 225 358 97 17 chr20 42714303 42714479 -23953526 + MLT1J2 LTR MaLR 197 386 -64 462 232 26 51 chr20 42715526 42715685 -23952320 + MIR SINE MIR 38 191 -63 422 249 172 12 chr20 42715757 42715926 -23952079 - MIR SINE MIR -1 261 66 845 241 45 0 chr20 42715978 42716177 -23951828 - MER3 DNA MER1_type -1 208 1 232 273 201 22 chr20 42716236 42716375 -23951630 - MIR3 SINE MIR -42 166 3 271 268 46 51 chr20 42716664 42716837 -23951168 + MIR SINE MIR 78 247 -15 2253 157 79 53 chr20 42717376 42717868 -23950137 + MLT1D LTR MaLR 1 505 0 326 281 10 10 chr20 42718824 42718920 -23949085 + GA-rich Low_complexity Low_complexity 3 98 0 185 200 36 0 chr20 42718937 42718992 -23949013 + GA-rich Low_complexity Low_complexity 2 58 0 795 221 25 6 chr20 42719888 42720051 -23947954 - MIR SINE MIR -54 208 43 22 0 0 0 chr20 42720353 42720375 -23947630 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr20 42720878 42720902 -23947103 + AT_rich Low_complexity Low_complexity 1 24 0 298 362 141 52 chr20 42721328 42721654 -23946351 - L2 LINE L2 -13 3259 2905 473 270 17 67 chr20 42721678 42721856 -23946149 - MIR3 SINE MIR -22 186 18 952 188 112 0 chr20 42721859 42722029 -23945976 - MER5A DNA MER1_type 0 189 1 204 286 48 16 chr20 42722460 42722523 -23945482 - MIR SINE MIR -114 148 84 859 237 19 42 chr20 42722575 42722790 -23945215 + MIR SINE MIR 19 228 -34 656 238 93 0 chr20 42723006 42723178 -23944827 + MER5A DNA MER1_type 1 188 -1 2284 118 0 6 chr20 42723344 42723658 -23944347 - AluSx SINE Alu 0 312 1 2604 150 38 20 chr20 42724370 42724822 -23943183 - MLT1C LTR MaLR -7 460 1 421 198 25 0 chr20 42725262 42725343 -23942662 - L2 LINE L2 -5 3308 3226 21 0 0 0 chr20 42725807 42725828 -23942177 + AT_rich Low_complexity Low_complexity 1 21 0 765 234 25 90 chr20 42725848 42726008 -23941997 + MIR SINE MIR 3 172 -90 2286 114 0 0 chr20 42726008 42726307 -23941698 + AluSc SINE Alu 1 299 -10 765 234 25 90 chr20 42726307 42726374 -23941631 + MIR SINE MIR 172 211 -51 917 211 50 41 chr20 42726374 42726592 -23941413 - MER58A DNA MER1_type -4 220 1 765 234 25 90 chr20 42726592 42726641 -23941364 + MIR SINE MIR 211 262 0 204 125 0 0 chr20 42727552 42727584 -23940421 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 808 269 99 27 chr20 42727712 42728114 -23939891 + LTR16A LTR ERVL 12 442 -8 261 330 60 0 chr20 42728161 42728261 -23939744 - L2 LINE L2 -239 3033 2928 189 309 0 0 chr20 42728919 42728974 -23939031 - L2 LINE L2 -669 2645 2591 1204 240 157 14 chr20 42729294 42729735 -23938270 - MLT1D LTR MaLR 0 505 2 1853 132 0 28 chr20 42729815 42730103 -23937902 + AluSx SINE Alu 1 280 -32 198 0 0 0 chr20 42730109 42730131 -23937874 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 22 0 0 0 chr20 42730774 42730796 -23937209 + AT_rich Low_complexity Low_complexity 1 22 0 281 257 37 18 chr20 42730802 42730911 -23937094 - L1ME4a LINE L1 -48 6073 5963 2521 256 59 58 chr20 42730941 42732020 -23935985 - HAL1b LINE L1 -8 1340 260 1312 189 23 0 chr20 42732024 42732283 -23935722 - L1MB4 LINE L1 -4 6176 5912 510 207 27 0 chr20 42732283 42732394 -23935611 + L1M4 LINE L1 5468 5581 -597 540 259 104 16 chr20 42732474 42732667 -23935338 + MIR SINE MIR 53 262 0 424 173 39 0 chr20 42733177 42733281 -23934724 + CT-rich Low_complexity Low_complexity 3 110 0 204 284 20 29 chr20 42734159 42734261 -23933744 + MIR SINE MIR 112 212 -50 359 291 170 6 chr20 42735558 42735740 -23932265 + HAL1 LINE L1 1501 1712 -795 1732 120 55 120 chr20 42736249 42736650 -23931355 + THE1C LTR MaLR 1 375 0 335 274 65 13 chr20 42736930 42737083 -23930922 + HAL1 LINE L1 2241 2401 -106 26145 140 13 18 chr20 42737486 42738130 -23929875 + L1PA8A LINE L1 590 1236 -5210 225 65 0 0 chr20 42738130 42738161 -23929844 + (CAA)n Simple_repeat Simple_repeat 3 33 0 26145 140 13 18 chr20 42738161 42743312 -23924693 + L1PA8A LINE L1 1236 6425 -21 280 304 75 71 chr20 42743396 42744415 -23923590 + L1ME4a LINE L1 3967 5003 -1143 189 107 0 0 chr20 42744415 42744443 -23923562 + (TTAA)n Simple_repeat Simple_repeat 3 30 0 280 304 75 71 chr20 42744443 42744634 -23923371 + L1ME4a LINE L1 5003 5192 -954 427 294 78 26 chr20 42745047 42745353 -23922652 + L1ME4a LINE L1 5643 5964 -157 1175 300 56 63 chr20 42745417 42746359 -23921646 + HAL1 LINE L1 2 937 -1570 438 70 0 0 chr20 42746362 42746419 -23921586 + U2 snRNA snRNA 4 60 -128 4393 206 11 10 chr20 42746438 42747396 -23920609 + L1PA14 LINE L1 2064 3022 -3124 2714 120 3 8 chr20 42747398 42747773 -23920232 + THE1C LTR MaLR 3 375 0 10169 128 36 0 chr20 42747773 42749251 -23918754 + THE1C-int LTR MaLR 1 1532 -48 1202 123 6 6 chr20 42749251 42749422 -23918583 + AluSx SINE Alu 1 171 -141 5844 219 42 31 chr20 42749422 42750502 -23917503 + L1MC3 LINE L1 3145 4212 -1954 5937 108 45 6 chr20 42750502 42752321 -23915684 + L1PA14 LINE L1 4294 6161 0 5844 219 42 31 chr20 42752321 42752627 -23915378 + L1MC3 LINE L1 4212 4513 -1653 1383 198 57 7 chr20 42752627 42752910 -23915095 + AluJb SINE Alu 1 297 -15 5844 219 42 31 chr20 42752910 42753094 -23914911 + L1MC3 LINE L1 4513 4694 -1472 1231 195 78 35 chr20 42753094 42753218 -23914787 + AluJo SINE Alu 1 118 -194 203 0 0 36 chr20 42753218 42753246 -23914759 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1231 195 78 35 chr20 42753246 42753403 -23914602 + AluJo SINE Alu 118 294 -18 5844 219 42 31 chr20 42753403 42754421 -23913584 + L1MC3 LINE L1 4694 5745 -421 545 79 45 11 chr20 42754430 42754519 -23913486 + LTR10D LTR ERV1 1 92 -421 391 209 29 65 chr20 42754528 42754667 -23913338 + L1MC3 LINE L1 6028 6161 -1624 * 710 276 143 48 chr20 42754663 42755159 -23912846 + HAL1 LINE L1 1555 2097 -410 384 278 61 28 chr20 42755216 42755428 -23912577 + HAL1 LINE L1 2260 2478 -29 338 229 59 34 chr20 42755460 42755578 -23912427 + L1ME4a LINE L1 5964 6084 -37 246 299 128 8 chr20 42756436 42756553 -23911452 + MIR SINE MIR 22 152 -110 718 260 73 10 chr20 42756607 42756811 -23911194 - MIR SINE MIR -14 248 32 189 379 19 0 chr20 42756890 42756993 -23911012 - MIR SINE MIR -59 149 45 248 283 0 0 chr20 42757450 42757510 -23910495 + L2 LINE L2 3214 3273 -40 2072 116 31 0 chr20 42757830 42758123 -23909882 - AluSq SINE Alu -11 302 1 233 311 40 14 chr20 42758793 42758867 -23909138 + L2 LINE L2 3102 3177 -95 180 270 32 48 chr20 42759335 42759398 -23908607 - MIR SINE MIR 0 262 201 502 296 50 6 chr20 42759598 42759757 -23908248 - MER5B DNA MER1_type -2 176 11 1953 190 70 50 chr20 42759785 42760202 -23907803 - MLT1C LTR MaLR 0 467 39 2258 117 0 13 chr20 42760202 42760518 -23907487 - AluSx SINE Alu 0 312 1 1953 190 70 50 chr20 42760518 42760558 -23907447 - MLT1C LTR MaLR -428 39 1 358 275 18 9 chr20 42761055 42761164 -23906841 + MIR SINE MIR 44 153 -109 787 266 87 25 chr20 42761207 42761416 -23906589 - MER46C DNA MER2_type -45 293 62 441 0 0 0 chr20 42761416 42761465 -23906540 + (CA)n Simple_repeat Simple_repeat 2 50 0 787 266 87 25 chr20 42761465 42761530 -23906475 - MER46C DNA MER2_type -276 62 2 1655 210 60 14 chr20 42762170 42762218 -23905787 - MLT1A1 LTR MaLR 0 365 321 1956 160 7 0 chr20 42762218 42762525 -23905480 - AluSx SINE Alu -3 309 1 1655 210 60 14 chr20 42762525 42762823 -23905182 - MLT1A1 LTR MaLR -44 321 3 233 374 17 9 chr20 42762843 42762958 -23905047 + MIR3 SINE MIR 84 199 -9 366 267 0 0 chr20 42763911 42764001 -23904004 - MIR SINE MIR -14 248 159 308 281 33 33 chr20 42765077 42765198 -23902807 + MIR3 SINE MIR 83 203 -5 344 352 0 44 chr20 42766723 42766882 -23901123 + MIR SINE MIR 48 199 -63 270 288 86 37 chr20 42767016 42767296 -23900709 - LTR33 LTR ERVL -175 346 23 6143 124 30 4 chr20 42767649 42769006 -23898999 - L1PB1 LINE L1 -5 6146 4766 460 336 40 16 chr20 42769375 42769628 -23898377 + MIR SINE MIR 1 259 -3 1159 217 14 0 chr20 42771437 42771649 -23896356 - MER58A DNA MER1_type 0 224 10 2496 153 32 104 chr20 42773038 42773593 -23894412 - MLT2B2 LTR ERVL 0 515 1 284 282 118 9 chr20 42774024 42774134 -23893871 - L2 LINE L2 0 3313 3192 2165 126 10 0 chr20 42775236 42775538 -23892467 - AluSx SINE Alu -7 305 1 697 233 37 19 chr20 42776781 42776990 -23891015 - L1M4 LINE L1 -497 5677 5460 495 218 105 8 chr20 42777759 42777883 -23890122 + L2 LINE L2 3137 3272 0 1926 159 187 10 chr20 42777989 42778222 -23889783 - MER31B LTR ERV1 0 466 276 1574 198 70 9 chr20 42778222 42778566 -23889439 + MLT1A1 LTR MaLR 1 365 0 1926 159 187 10 chr20 42778566 42778728 -23889277 - MER31B LTR ERV1 -190 276 1 245 367 9 0 chr20 42779014 42779123 -23888882 - MIR SINE MIR -76 186 77 248 279 35 12 chr20 42779179 42779265 -23888740 - L1ME LINE L1 -543 5578 5491 2415 71 0 34 chr20 42779376 42779698 -23888307 - AluY SINE Alu 0 311 1 22 35 0 0 chr20 42779808 42779837 -23888168 + AT_rich Low_complexity Low_complexity 1 29 0 192 40 0 0 chr20 42780016 42780041 -23887964 + (CA)n Simple_repeat Simple_repeat 1 25 0 255 302 94 18 chr20 42780288 42780619 -23887386 - L1ME LINE L1 -1587 4559 4204 301 260 10 83 chr20 42780847 42780943 -23887062 + LTR33 LTR ERVL 82 170 -351 477 227 114 28 chr20 42780999 42781175 -23886830 + LTR33 LTR ERVL 328 518 -3 413 293 177 66 chr20 42781279 42781489 -23886516 - L2 LINE L2 0 3313 3128 261 0 0 0 chr20 42781489 42781518 -23886487 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 413 293 177 66 chr20 42781518 42781747 -23886258 - L2 LINE L2 -185 3128 2825 613 209 130 3 chr20 42781761 42781840 -23886165 - MER33 DNA MER1_type -2261 363 295 186 43 0 0 chr20 42781840 42781863 -23886142 + (CA)n Simple_repeat Simple_repeat 2 24 0 613 209 130 3 chr20 42781863 42782003 -23886002 - MER33 DNA MER1_type -2329 295 45 274 204 0 0 chr20 42782109 42782158 -23885847 + L2 LINE L2 3210 3258 -14 202 320 52 21 chr20 42782841 42782938 -23885067 - MIR SINE MIR -115 147 48 188 67 33 0 chr20 42784139 42784169 -23883836 + (GGAGA)n Simple_repeat Simple_repeat 2 32 0 186 221 0 128 chr20 42784373 42784459 -23883546 - MIR SINE MIR -112 150 76 386 300 61 44 chr20 42784970 42785150 -23882855 - MIR3 SINE MIR -3 205 23 295 273 107 16 chr20 42785238 42785359 -23882646 - L2 LINE L2 0 3313 3182 267 252 244 0 chr20 42785822 42785953 -23882052 - MER5A DNA MER1_type 0 189 27 500 255 38 38 chr20 42786613 42786770 -23881235 + MIR SINE MIR 67 223 -39 353 321 47 31 chr20 42786970 42787163 -23880842 - MIR SINE MIR -44 218 23 243 0 0 0 chr20 42787197 42787224 -23880781 + (T)n Simple_repeat Simple_repeat 1 27 0 573 185 6 108 chr20 42787387 42787490 -23880515 + MLT1A1 LTR MaLR 224 307 -58 2183 121 7 0 chr20 42787490 42787788 -23880217 - AluSx SINE Alu -12 300 1 573 185 6 108 chr20 42787788 42787841 -23880164 + MLT1A1 LTR MaLR 307 364 -1 7446 209 44 44 chr20 42787842 42789577 -23878428 + MLT1A1-int LTR MaLR 1 1735 0 1410 247 16 30 chr20 42789578 42789947 -23878058 + MLT1A1 LTR MaLR 2 365 0 2204 160 8 5 chr20 42789953 42790322 -23877683 - L1MB2 LINE L1 -157 6014 5645 355 213 0 0 chr20 42790324 42790385 -23877620 + Tigger3(Golem) DNA MER2_type 3 63 -2966 * 711 213 0 0 chr20 42790381 42790508 -23877497 + Tigger3(Golem) DNA MER2_type 2911 3037 0 1850 195 75 47 chr20 42790509 42790751 -23877254 - L1MB2 LINE L1 -525 5646 5412 2363 111 0 3 chr20 42790751 42791058 -23876947 - AluSx SINE Alu -6 306 1 1850 195 75 47 chr20 42791058 42791592 -23876413 - L1MB2 LINE L1 -759 5412 4837 404 192 0 13 chr20 42791617 42791695 -23876310 + LTR33A LTR ERVL 444 520 -3 418 229 166 19 chr20 42792463 42792620 -23875385 - MIR3 SINE MIR -1 207 28 585 255 83 10 chr20 42793026 42793230 -23874775 + MIR SINE MIR 44 262 0 1540 156 83 7 chr20 42793299 42793601 -23874404 - MER33 DNA MER1_type -1 323 1 787 242 45 14 chr20 42794394 42794617 -23873388 + MIR SINE MIR 6 235 -27 621 187 0 0 chr20 42794683 42794790 -23873215 - AluSp/q SINE Alu -1 312 206 225 255 0 0 chr20 42795410 42795457 -23872548 + L1MC/D LINE L1 5762 5808 -2000 766 263 58 5 chr20 42795563 42795787 -23872218 + MIR SINE MIR 6 241 -21 272 224 17 0 chr20 42795829 42795887 -23872118 + CT-rich Low_complexity Low_complexity 3 61 0 22 35 0 0 chr20 42795970 42795999 -23872006 + AT_rich Low_complexity Low_complexity 1 29 0 281 295 199 33 chr20 42796549 42796820 -23871185 - L2 LINE L2 -25 3247 2932 607 270 59 9 chr20 42797922 42798144 -23869861 + L1ME4a LINE L1 5662 5894 -227 250 312 64 24 chr20 42798328 42798453 -23869552 + MIR SINE MIR 46 175 -87 2438 81 0 3 chr20 42798553 42798860 -23869145 + AluY SINE Alu 1 306 -5 1479 251 63 18 chr20 42798956 42799402 -23868603 - MLT1C LTR MaLR -1 466 1 380 129 0 14 chr20 42799540 42799610 -23868395 + (TG)n Simple_repeat Simple_repeat 2 70 0 391 96 0 0 chr20 42800647 42800699 -23867306 + MADE1 DNA Mariner 1 52 -28 2241 124 0 0 chr20 42801250 42801556 -23866449 + AluSx SINE Alu 2 307 -5 275 357 138 5 chr20 42801630 42801854 -23866151 - L2 LINE L2 -353 2961 2708 194 298 18 0 chr20 42802283 42802340 -23865665 + MIR SINE MIR 100 157 -105 251 211 18 0 chr20 42802381 42802438 -23865567 + (CA)n Simple_repeat Simple_repeat 1 58 0 572 214 6 0 chr20 42802457 42802635 -23865370 + (CA)n Simple_repeat Simple_repeat 1 179 0 307 323 148 8 chr20 42803121 42803378 -23864627 - L2 LINE L2 -993 2321 2029 221 21 42 42 chr20 42803769 42803817 -23864188 + (TAA)n Simple_repeat Simple_repeat 3 50 0 191 62 94 16 chr20 42803850 42803914 -23864091 + (TA)n Simple_repeat Simple_repeat 1 69 0 199 146 45 22 chr20 42803951 42804040 -23863965 + (TATAA)n Simple_repeat Simple_repeat 5 95 0 286 241 54 27 chr20 42804267 42804379 -23863626 - L3 LINE CR1 -91 1486 1372 189 0 0 0 chr20 42804687 42804708 -23863297 + (TA)n Simple_repeat Simple_repeat 2 22 0 287 331 32 0 chr20 42804990 42805114 -23862891 + MIR SINE MIR 80 207 -55 1945 175 11 35 chr20 42805772 42806144 -23861861 + MLT1A1 LTR MaLR 1 363 -2 1574 227 36 14 chr20 42806422 42806779 -23861226 + MLT1A1 LTR MaLR 1 365 0 341 196 18 131 chr20 42806787 42806955 -23861050 + MLT1J2 LTR MaLR 302 450 0 465 278 45 58 chr20 42807016 42807239 -23860766 - MIR SINE MIR -21 241 22 191 423 0 0 chr20 42807432 42807503 -23860502 - L2 LINE L2 -83 3189 3119 201 273 31 62 chr20 42808998 42809126 -23858879 + MIR3 SINE MIR 68 191 -17 2111 127 53 28 chr20 42809415 42809770 -23858235 + THE1B LTR MaLR 1 364 0 197 184 0 0 chr20 42810381 42810419 -23857586 - L2 LINE L2 -15 3298 3261 984 228 87 0 chr20 42810502 42810708 -23857297 - MER58A DNA MER1_type 0 224 1 7715 31 5 0 chr20 42811686 42812660 -23855345 + L1PA3 LINE L1 5177 6154 -1 27 0 0 0 chr20 42812660 42812687 -23855318 + AT_rich Low_complexity Low_complexity 1 27 0 739 258 36 27 chr20 42813039 42813260 -23854745 - MIR SINE MIR -33 229 7 378 155 0 0 chr20 42813703 42813761 -23854244 - MER58 DNA MER1_type -2 2418 2361 1128 220 108 10 chr20 42813762 42814057 -23853948 - MLT1B LTR MaLR 0 390 67 641 211 62 19 chr20 42814063 42814224 -23853781 - MLT1E1 LTR MaLR -486 168 1 1123 236 71 11 chr20 42814226 42814493 -23853512 - MER58 DNA MER1_type -57 284 2 219 208 40 89 chr20 42814704 42814805 -23853200 - MIR SINE MIR -51 211 116 582 202 73 79 chr20 42814910 42814992 -23853013 - MER45A DNA AcHobo -1404 177 96 2302 105 7 0 chr20 42814992 42815298 -23852707 + AluSp SINE Alu 2 309 -4 582 202 73 79 chr20 42815298 42815393 -23852612 - MER45A DNA AcHobo -1485 96 1 771 246 83 31 chr20 42816303 42816531 -23851474 + MIR SINE MIR 1 240 -22 244 249 48 47 chr20 42816717 42816830 -23851175 + MIR SINE MIR 44 155 -53 1639 157 8 4 chr20 42816863 42817124 -23850881 - AluJo SINE Alu -30 282 21 297 274 145 46 chr20 42818014 42818317 -23849688 + L2 LINE L2 2907 3239 -74 275 284 42 11 chr20 42818454 42818549 -23849456 + MIR SINE MIR 60 157 -105 521 241 62 12 chr20 42818569 42818731 -23849274 - MIR SINE MIR -28 234 65 526 152 83 83 chr20 42819267 42819313 -23848692 + MIR SINE MIR 118 163 -99 4725 43 30 28 chr20 42819313 42819918 -23848087 + LTR14B LTR ERVK 1 606 -2 526 152 83 83 chr20 42819918 42820016 -23847989 + MIR SINE MIR 162 262 0 1128 244 0 9 chr20 42820448 42820665 -23847340 + MER58A DNA MER1_type 1 215 -9 405 260 87 35 chr20 42821233 42821406 -23846599 - MIR SINE MIR -28 234 53 356 305 45 45 chr20 42821523 42821677 -23846328 - L2 LINE L2 -1 3312 3159 266 320 49 0 chr20 42821777 42821899 -23846106 - MIR SINE MIR -15 247 120 220 324 0 0 chr20 42823017 42823091 -23844914 + MIR SINE MIR 33 106 -102 3932 106 46 141 chr20 42823206 42823378 -23844627 + LTR1 LTR ERV1 1 188 -597 7191 53 11 3 chr20 42823378 42824709 -23843296 + L1PA6 LINE L1 4816 6154 0 3932 106 46 141 chr20 42824709 42825403 -23842602 + LTR1 LTR ERV1 188 785 0 356 192 64 0 chr20 42826837 42826915 -23841090 + MIR SINE MIR 81 163 -99 1634 222 118 15 chr20 42826915 42827441 -23840564 - MER69 DNA AcHobo 0 2526 1947 303 270 0 27 chr20 42827435 42827509 -23840496 - MER69 DNA AcHobo -827 399 328 * 1836 147 7 0 chr20 42827524 42827796 -23840209 + AluJo SINE Alu 14 287 -25 222 37 0 0 chr20 42827804 42827831 -23840174 + (CATA)n Simple_repeat Simple_repeat 2 28 0 838 234 60 67 chr20 42827895 42828194 -23839811 - MER69 DNA AcHobo -2217 309 13 2320 118 19 19 chr20 42829412 42829784 -23838221 - THE1C LTR MaLR 0 375 4 222 279 19 39 chr20 42829892 42829996 -23838009 + MIR SINE MIR 161 262 0 22 0 0 0 chr20 42830214 42830236 -23837769 + AT_rich Low_complexity Low_complexity 1 22 0 829 274 120 50 chr20 42830286 42831079 -23836926 - L1ME4a LINE L1 -7 6114 5267 398 262 19 0 chr20 42831450 42831553 -23836452 - L1ME4a LINE L1 -1296 4850 4746 656 316 34 4 chr20 42831572 42831806 -23836199 + MIR SINE MIR 12 252 -10 2226 188 37 26 chr20 42831810 42832272 -23835733 - MLT1C LTR MaLR 0 467 1 344 333 40 5 chr20 42832499 42832700 -23835305 - L1ME4a LINE L1 -2201 3945 3738 1101 208 23 23 chr20 42833111 42833375 -23834630 + L1ME1 LINE L1 5782 6045 -121 361 240 90 0 chr20 42833387 42833487 -23834518 + L1MC5 LINE L1 7777 7885 -76 195 42 0 0 chr20 42834235 42834259 -23833746 + (TCTA)n Simple_repeat Simple_repeat 3 26 0 1423 134 112 34 chr20 42834268 42834537 -23833468 - AluJo SINE Alu -22 290 1 198 0 0 0 chr20 42834578 42834600 -23833405 + (TTG)n Simple_repeat Simple_repeat 3 24 0 7523 40 5 0 chr20 42834600 42836234 -23831771 - L1PA4 LINE L1 0 6155 4518 1200 149 154 0 chr20 42836875 42837089 -23830916 + MER92B LTR ERV1 1 247 -389 241 135 0 0 chr20 42837098 42837135 -23830870 + MER92A LTR ERV1 53 89 -323 270 208 39 13 chr20 42838212 42838289 -23829716 - MIR SINE MIR -10 252 174 1068 226 80 62 chr20 42838802 42839204 -23828801 + L1ME1 LINE L1 5751 6159 -7 289 154 0 0 chr20 42839667 42839719 -23828286 + L1ME4a LINE L1 5846 5897 -224 343 213 67 0 chr20 42839920 42839995 -23828010 + AluJb SINE Alu 47 126 -176 1161 175 24 5 chr20 42840037 42840243 -23827762 + AluJo SINE Alu 95 304 -8 1358 286 61 13 chr20 42840379 42840586 -23827419 + L2 LINE L2 1837 2033 -1281 2206 116 0 0 chr20 42840586 42840870 -23827135 - AluSg SINE Alu -26 284 1 1358 286 61 13 chr20 42840870 42841201 -23826804 + L2 LINE L2 2033 2401 -913 401 238 49 8 chr20 42841207 42841329 -23826676 + LTR33 LTR ERVL 390 516 -5 331 352 21 0 chr20 42842185 42842330 -23825675 - MIR SINE MIR -56 206 59 2017 146 0 40 chr20 42842469 42842791 -23825214 - AluSx SINE Alu -3 309 1 230 301 175 14 chr20 42843306 42843449 -23824556 - MIR SINE MIR -78 184 19 526 279 27 6 chr20 42843460 42843643 -23824362 - MER5A DNA MER1_type -2 187 1 963 278 91 7 chr20 42843832 42844250 -23823755 + MER113 DNA MER1_type? 61 513 -8 822 166 51 11 chr20 42844266 42844441 -23823564 - MER5A DNA MER1_type 0 189 8 390 267 61 12 chr20 42845276 42845447 -23822558 + MIR SINE MIR 37 214 -48 2019 151 6 0 chr20 42845916 42846227 -23821778 + AluSq SINE Alu 1 313 0 215 93 47 47 chr20 42846227 42846270 -23821735 + GA-rich Low_complexity Low_complexity 2 44 0 414 276 9 9 chr20 42846533 42846649 -23821356 - MIR SINE MIR -146 116 1 429 275 176 47 chr20 42847790 42848194 -23819811 + L1ME4a LINE L1 5645 6100 -21 27 29 0 0 chr20 42848207 42848241 -23819764 + AT_rich Low_complexity Low_complexity 1 34 0 1837 170 10 0 chr20 42849125 42849414 -23818591 - AluJo SINE Alu -18 294 3 1111 205 128 48 chr20 42849775 42850111 -23817894 + MLT1B LTR MaLR 11 373 -17 195 214 0 0 chr20 42850358 42850400 -23817605 + L2 LINE L2 3270 3311 -2 343 215 204 0 chr20 42851235 42851328 -23816677 - MER81 DNA DNA -2 112 1 196 292 0 52 chr20 42851792 42851888 -23816117 + L2 LINE L2 2890 2980 -333 195 316 0 0 chr20 42852100 42852157 -23815848 + L2 LINE L2 3242 3298 -15 1891 249 30 66 chr20 42852995 42853423 -23814582 - MLT1E LTR MaLR -2 591 149 2114 118 7 33 chr20 42853423 42853729 -23814276 + AluSx SINE Alu 1 298 -14 1891 249 30 66 chr20 42853729 42853784 -23814221 - MLT1E LTR MaLR -444 149 94 1837 164 48 0 chr20 42853784 42854076 -23813929 - AluJo SINE Alu -6 306 1 1891 249 30 66 chr20 42854076 42854182 -23813823 - MLT1E LTR MaLR -499 94 22 196 222 0 56 chr20 42854277 42854331 -23813674 - L2 LINE L2 0 3272 3222 303 93 0 0 chr20 42854335 42854378 -23813627 + (CAGTC)n Simple_repeat Simple_repeat 3 45 0 1926 135 8 0 chr20 42854398 42854665 -23813340 - AluSp SINE Alu -25 288 20 1168 282 133 35 chr20 42854666 42855568 -23812437 - L2 LINE L2 -42 3271 2310 198 274 0 0 chr20 42855824 42855875 -23812130 - MIR SINE MIR -6 256 206 513 299 45 23 chr20 42856075 42856296 -23811709 - L3 LINE CR1 -108 1469 1244 213 233 35 81 chr20 42856492 42856578 -23811427 - MIR SINE MIR -96 166 85 842 184 148 131 chr20 42856592 42857011 -23810994 - LTR37A LTR ERV1 0 426 1 198 308 88 0 chr20 42858101 42858192 -23809813 + L2 LINE L2 3162 3260 -12 350 252 43 111 chr20 42858227 42858461 -23809544 - L2 LINE L2 -1 3312 3095 352 323 16 37 chr20 42858624 42858813 -23809192 - MIR SINE MIR 0 262 78 2245 100 0 7 chr20 42859436 42859751 -23808254 + AluSg SINE Alu 1 313 0 329 280 84 35 chr20 42859879 42860022 -23807983 + MIR SINE MIR 107 256 -6 258 335 139 26 chr20 42861030 42861260 -23806745 + L2 LINE L2 3019 3274 -39 529 330 40 9 chr20 42861291 42861518 -23806487 + MIR SINE MIR 29 262 0 1859 151 3 17 chr20 42862369 42862661 -23805344 + AluJo SINE Alu 1 288 -24 240 111 0 0 chr20 42862664 42862700 -23805305 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 614 322 103 25 chr20 42862950 42863596 -23804409 + L2 LINE L2 2616 3313 0 313 132 58 33 chr20 42863684 42863805 -23804200 + (TA)n Simple_repeat Simple_repeat 1 124 0 225 65 0 0 chr20 42863824 42863855 -23804150 + (TATG)n Simple_repeat Simple_repeat 2 32 0 410 184 13 0 chr20 42863881 42863957 -23804048 - MIR SINE MIR -119 143 67 1826 157 17 34 chr20 42864355 42864705 -23803300 - L1MB5 LINE L1 -10 6164 5821 1025 152 41 35 chr20 42865421 42865618 -23802387 - MER20 DNA MER1_type 0 219 22 344 272 49 53 chr20 42866269 42866512 -23801493 + L2 LINE L2 1706 1947 -1367 * 596 168 8 25 chr20 42866503 42866622 -23801383 + L2 LINE L2 3184 3300 -13 267 31 0 0 chr20 42866622 42866654 -23801351 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 290 278 98 35 chr20 42866658 42866913 -23801092 + L2 LINE L2 1949 2219 -1095 856 303 66 49 chr20 42867014 42867440 -23800565 + MLT1K LTR MaLR 137 569 -19 241 301 24 0 chr20 42867456 42867539 -23800466 + L2 LINE L2 2226 2310 -1004 961 248 87 112 chr20 42867834 42868386 -23799619 + MLT1G LTR MaLR 53 590 0 188 301 32 65 chr20 42868512 42868605 -23799400 + L2 LINE L2 3182 3271 -1 188 167 21 0 chr20 42869728 42869776 -23798229 + (TGGA)n Simple_repeat Simple_repeat 3 51 0 518 227 22 0 chr20 42869826 42870064 -23797941 + (TGGA)n Simple_repeat Simple_repeat 1 243 0 327 292 50 17 chr20 42870121 42870241 -23797764 - L2 LINE L2 0 3313 3190 355 308 9 0 chr20 42870256 42870363 -23797642 - L2 LINE L2 -642 2672 2565 455 238 205 7 chr20 42870429 42870580 -23797425 + MIR SINE MIR 47 227 -35 723 262 49 13 chr20 42871071 42871296 -23796709 + MIR SINE MIR 20 252 -10 381 176 44 22 chr20 42871954 42872045 -23795960 - MIR SINE MIR -133 129 37 918 223 63 0 chr20 42872408 42872614 -23795391 - MER20 DNA MER1_type 0 219 1 259 271 6 17 chr20 42873486 42873662 -23794343 + GA-rich Low_complexity Low_complexity 1 174 0 261 253 13 13 chr20 42873681 42873756 -23794249 - MER103 DNA DNA -4 162 88 400 223 18 18 chr20 42873777 42873889 -23794116 - MIR SINE MIR -1 261 150 224 312 28 28 chr20 42874227 42874336 -23793669 - MIR SINE MIR -57 205 97 450 13 0 77 chr20 42874439 42874517 -23793488 + (GGGA)n Simple_repeat Simple_repeat 3 74 0 2400 121 15 91 chr20 42874827 42875290 -23792715 + MSTA LTR MaLR 1 428 0 289 287 37 52 chr20 42875610 42875746 -23792259 + MER5A DNA MER1_type 54 187 -2 274 263 15 0 chr20 42876799 42876932 -23791073 + GA-rich Low_complexity Low_complexity 1 135 0 * 522 183 0 48 chr20 42876911 42877097 -23790908 + G-rich Low_complexity Low_complexity 3 179 0 470 228 89 16 chr20 42877302 42877425 -23790580 + MER94 DNA DNA 1 132 -2 593 241 200 0 chr20 42877725 42877920 -23790085 + MIR SINE MIR 7 240 -22 21 0 0 0 chr20 42877935 42877956 -23790049 + AT_rich Low_complexity Low_complexity 1 21 0 486 285 0 0 chr20 42878071 42878208 -23789797 - MIR SINE MIR -32 230 94 1848 193 11 30 chr20 42878818 42879186 -23788819 - MLT1A1 LTR MaLR -4 361 1 202 200 0 0 chr20 42879304 42879339 -23788666 + (CA)n Simple_repeat Simple_repeat 2 36 0 2427 161 99 13 chr20 42880318 42880783 -23787222 + MLT1D LTR MaLR 1 505 0 1950 99 31 71 chr20 42881422 42881553 -23786452 + AluSx SINE Alu 1 136 -176 2458 74 3 7 chr20 42881553 42881862 -23786143 + AluY SINE Alu 1 308 -3 1950 99 31 71 chr20 42881862 42882054 -23785951 + AluSx SINE Alu 136 311 -1 21 0 0 0 chr20 42882054 42882075 -23785930 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr20 42882254 42882277 -23785728 + AT_rich Low_complexity Low_complexity 1 23 0 552 204 140 32 chr20 42882530 42882687 -23785318 - MER58C DNA MER1_type -3 212 39 335 337 67 39 chr20 42882790 42883253 -23784752 + L1M4 LINE L1 2128 2603 -3543 456 283 41 93 chr20 42883619 42883835 -23784170 + L1M4 LINE L1 4220 4446 -1700 1598 217 73 10 chr20 42883835 42884245 -23783760 + MER63B DNA MER1_type 1 436 0 456 283 41 93 chr20 42884245 42884611 -23783394 + L1M4 LINE L1 4446 4772 -1374 381 253 126 25 chr20 42884790 42885037 -23782968 - L1ME LINE L1 -516 5605 5327 1294 199 118 72 chr20 42885814 42886297 -23781708 + MLT1D LTR MaLR 1 505 0 291 290 117 14 chr20 42887273 42887418 -23780587 - MIR SINE MIR -43 219 60 505 312 56 16 chr20 42888126 42888231 -23779774 - MIR SINE MIR 0 262 163 1122 245 20 35 chr20 42888231 42888574 -23779431 + MER46C DNA MER2_type 1 338 0 505 312 56 16 chr20 42888574 42888718 -23779287 - MIR SINE MIR -99 163 3 814 240 40 0 chr20 42889065 42889265 -23778740 + MIR SINE MIR 11 218 -44 280 213 84 45 chr20 42889323 42889478 -23778527 + MER104 DNA Tc2 20 180 0 554 345 23 19 chr20 42890039 42890303 -23777702 + L2 LINE L2 2701 2965 -349 255 259 19 0 chr20 42890391 42890445 -23777560 + MER91 DNA MER1_type 142 196 0 535 233 8 31 chr20 42890458 42890587 -23777418 - L2 LINE L2 0 3313 3188 663 270 127 93 chr20 42890820 42891016 -23776989 - L2 LINE L2 -337 2977 2789 2151 122 0 25 chr20 42891016 42891335 -23776670 + AluSx SINE Alu 1 311 -1 663 270 127 93 chr20 42891335 42891444 -23776561 - L2 LINE L2 -525 2789 2685 960 218 30 0 chr20 42891444 42891646 -23776359 + MER3 DNA MER1_type 1 208 -1 663 270 127 93 chr20 42891646 42891932 -23776073 - L2 LINE L2 -629 2685 2365 201 39 0 0 chr20 42892084 42892110 -23775895 + (TG)n Simple_repeat Simple_repeat 1 26 0 250 290 89 32 chr20 42892178 42892302 -23775703 + L2 LINE L2 3137 3267 -5 183 217 0 0 chr20 42893102 42893162 -23774843 + (CA)n Simple_repeat Simple_repeat 1 60 0 566 261 151 31 chr20 42893834 42894125 -23773880 + L1ME4a LINE L1 5783 6108 -13 459 63 32 116 chr20 42894432 42894527 -23773478 + L1PA10 LINE L1 6082 6168 0 262 174 43 43 chr20 42894666 42894735 -23773270 - MIR SINE MIR -110 152 84 2209 127 0 3 chr20 42895033 42895341 -23772664 - AluSx SINE Alu -3 309 3 261 353 90 12 chr20 42895877 42896044 -23771961 - MIR SINE MIR -75 187 8 405 220 64 35 chr20 42896082 42896255 -23771750 - L1ME4a LINE L1 -5 6116 5939 573 219 0 0 chr20 42896546 42896651 -23771354 - MER44D DNA MER2_type -1 604 500 * 1552 163 18 47 chr20 42896649 42897033 -23770972 - MER44D DNA MER2_type -34 671 3 333 253 24 0 chr20 42897034 42897117 -23770888 - L1ME4a LINE L1 -497 5624 5540 4131 98 2 0 chr20 42897150 42897703 -23770302 + MER41A LTR ERV1 1 554 0 180 176 0 0 chr20 42898832 42898866 -23769139 + A-rich Low_complexity Low_complexity 2 35 0 278 335 141 6 chr20 42898904 42899074 -23768931 + MIR3 SINE MIR 15 207 -1 1462 193 83 42 chr20 42899314 42899827 -23768178 + MER67C LTR ERV1 1 506 -8 368 278 93 51 chr20 42900047 42900263 -23767742 + MLT1H LTR MaLR 108 332 -217 367 297 27 14 chr20 42900295 42900443 -23767562 + MLT1H LTR MaLR 393 542 -7 474 274 108 50 chr20 42900860 42901316 -23766689 - L2 LINE L2 -22 3291 2810 184 133 22 67 chr20 42903223 42903268 -23764737 - L2 LINE L2 -6 3307 3265 * 375 244 207 21 chr20 42903236 42903429 -23764576 - MIR SINE MIR -14 248 20 326 281 83 103 chr20 42903814 42903852 -23764153 - L2 LINE L2 -34 3279 3242 2261 84 4 0 chr20 42903852 42904127 -23763878 + AluSg SINE Alu 2 277 -33 180 0 0 0 chr20 42904130 42904150 -23763855 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 326 281 83 103 chr20 42904150 42904167 -23763838 - L2 LINE L2 -73 3240 3224 186 71 0 0 chr20 42904167 42904195 -23763810 + (CAGAA)n Simple_repeat Simple_repeat 4 31 0 326 281 83 103 chr20 42904195 42904589 -23763416 - L2 LINE L2 -89 3224 2834 355 299 30 8 chr20 42905299 42905433 -23762572 - MIR SINE MIR -29 233 97 979 221 5 0 chr20 42905879 42906087 -23761918 - MER3 DNA MER1_type 0 209 1 701 226 239 29 chr20 42906478 42906784 -23761221 - MLT1F LTR MaLR -168 374 5 193 279 176 0 chr20 42906788 42906856 -23761149 + L2 LINE L2 3177 3256 -16 180 359 0 0 chr20 42906890 42906954 -23761051 + MIR3 SINE MIR 116 179 -29 225 213 21 0 chr20 42908901 42908948 -23759057 + MER58 DNA MER1_type 2373 2420 0 510 230 0 0 chr20 42909966 42910066 -23757939 - MER58 DNA MER1_type -2139 281 182 1692 136 14 14 chr20 42910104 42910384 -23757621 + L1MB4 LINE L1 5901 6180 0 21 71 0 0 chr20 42910694 42910736 -23757269 + AT_rich Low_complexity Low_complexity 1 42 0 447 220 118 35 chr20 42911284 42911458 -23756547 - MLT1G LTR MaLR 0 567 368 660 256 117 94 chr20 42911484 42911793 -23756212 - MLT1G LTR MaLR -273 322 7 2225 87 0 0 chr20 42911793 42912068 -23755937 + AluY SINE Alu 21 295 -16 642 219 0 0 chr20 42912069 42912215 -23755790 + (TA)n Simple_repeat Simple_repeat 1 146 0 449 255 125 38 chr20 42912741 42913078 -23754927 + MLT1J2 LTR MaLR 15 406 -44 275 219 16 16 chr20 42913223 42913287 -23754718 + MLT1I LTR MaLR 346 409 0 699 228 0 25 chr20 42913762 42913924 -23754081 - MLT1F1 LTR MaLR -1 566 409 1142 118 27 86 chr20 42914466 42914686 -23753319 - AluJo SINE Alu -22 290 84 219 231 0 0 chr20 42915046 42915085 -23752920 + polypurine Low_complexity Low_complexity 3 41 0 590 276 69 24 chr20 42915356 42915602 -23752403 + MIR SINE MIR 2 258 -4 482 267 51 67 chr20 42915608 42915767 -23752238 + MIR SINE MIR 12 167 -95 1904 219 116 26 chr20 42915767 42916311 -23751694 + MLT1G1 LTR MaLR 3 595 0 482 267 51 67 chr20 42916311 42916406 -23751599 + MIR SINE MIR 167 262 0 287 218 13 51 chr20 42916412 42916490 -23751515 - MIR SINE MIR -154 108 34 243 299 63 30 chr20 42917387 42917526 -23750479 - MIR SINE MIR -61 147 23 414 257 34 40 chr20 42917760 42918038 -23749967 + L1ME4a LINE L1 5798 6110 -11 1449 189 0 47 chr20 42918123 42918252 -23749753 + AluJo SINE Alu 14 148 -164 276 53 0 0 chr20 42918252 42918290 -23749715 + (TTG)n Simple_repeat Simple_repeat 2 39 0 1449 189 0 47 chr20 42918290 42918457 -23749548 + AluJo SINE Alu 148 296 -16 543 118 0 0 chr20 42918652 42918737 -23749268 + (GGGA)n Simple_repeat Simple_repeat 4 88 0 328 345 135 37 chr20 42919266 42919724 -23748281 + HAL1b LINE L1 37 539 -809 262 218 0 51 chr20 42919726 42919804 -23748201 + GA-rich Low_complexity Low_complexity 1 74 0 26 50 0 0 chr20 42920010 42920050 -23747955 + AT_rich Low_complexity Low_complexity 1 40 0 321 47 0 0 chr20 42920492 42920535 -23747470 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1864 130 53 56 chr20 42920571 42920947 -23747058 + THE1C LTR MaLR 1 375 0 797 273 109 40 chr20 42921149 42921746 -23746259 + L1M3 LINE L1 2758 3395 -2751 1629 160 3 49 chr20 42921832 42922138 -23745867 - AluJo SINE Alu -20 292 1 187 225 0 0 chr20 42922175 42922215 -23745790 + MER5A DNA MER1_type 11 50 -139 370 167 294 0 chr20 42922333 42922435 -23745570 + MER5A DNA MER1_type 55 186 -3 239 271 57 29 chr20 42922484 42922624 -23745381 + L1M3 LINE L1 3689 3832 -2314 322 285 136 63 chr20 42922643 42922959 -23745046 + L1M3 LINE L1 5040 5378 -768 275 141 273 30 chr20 42923258 42923357 -23744648 + L1M3 LINE L1 5644 5766 -546 329 316 105 68 chr20 42923766 42924379 -23743626 + L2 LINE L2 2677 3311 -2 325 281 82 7 chr20 42924457 42924603 -23743402 + L1ME LINE L1 5645 5801 -320 580 180 109 33 chr20 42926468 42926651 -23741354 + MIR SINE MIR 66 262 0 1569 183 31 86 chr20 42926740 42927042 -23740963 + MLT1A1 LTR MaLR 5 283 -82 1839 173 0 10 chr20 42927042 42927349 -23740656 + AluSx SINE Alu 1 304 -8 1569 183 31 86 chr20 42927349 42927428 -23740577 + MLT1A1 LTR MaLR 283 365 0 283 237 158 0 chr20 42929106 42929182 -23738823 + MLT1C LTR MaLR 6 93 -374 186 272 65 22 chr20 42929775 42929867 -23738138 - L2 LINE L2 0 3272 3177 493 181 0 11 chr20 42930254 42930348 -23737657 + L1MB3 LINE L1 5699 5791 -380 1640 189 71 76 chr20 42930348 42930855 -23737150 + MLT2B3 LTR ERVL 1 554 0 2124 153 29 5 chr20 42930855 42931241 -23736764 + L1MB3 LINE L1 5787 6181 -2 426 196 124 64 chr20 42931352 42931644 -23736361 + LTR16A1 LTR ERVL 99 434 -23 589 169 154 49 chr20 42931651 42931868 -23736137 - MER106B DNA MER1_type 0 1059 1 294 226 32 21 chr20 42932344 42932424 -23735581 - L2 LINE L2 0 3272 3192 510 251 107 45 chr20 42932424 42932667 -23735338 + MIR SINE MIR 2 259 -3 271 280 136 32 chr20 42933837 42933962 -23734043 + MIR SINE MIR 27 164 -98 245 219 65 81 chr20 42934304 42934427 -23733578 + MIR SINE MIR 28 148 -114 1842 130 88 0 chr20 42935189 42935473 -23732532 - AluSx SINE Alu -3 309 1 230 284 0 0 chr20 42935473 42935540 -23732465 + CT-rich Low_complexity Low_complexity 1 67 0 998 218 70 33 chr20 42935581 42935911 -23732094 + MER96B DNA MER1_type? 1 342 -75 293 276 0 0 chr20 42936685 42936761 -23731244 - MIR SINE MIR -108 154 79 609 309 85 25 chr20 42936976 42937809 -23730196 + L1MC4a LINE L1 4967 5342 -804 494 125 0 34 chr20 42937811 42937899 -23730106 + MLT2B3 LTR ERVL 1 85 -469 2387 100 0 0 chr20 42937975 42938276 -23729729 + AluSc SINE Alu 1 301 -8 1815 201 108 25 chr20 42938294 42938693 -23729312 + MLT2B3 LTR ERVL 77 508 -46 247 158 0 0 chr20 42938709 42938747 -23729258 + (TG)n Simple_repeat Simple_repeat 1 38 0 338 218 20 7 chr20 42938747 42938894 -23729111 + (TA)n Simple_repeat Simple_repeat 2 150 0 546 300 43 63 chr20 42940545 42940845 -23727160 - MLT1J LTR MaLR -214 297 4 624 252 50 28 chr20 42942697 42942915 -23725090 + MIR SINE MIR 8 230 -32 1840 119 0 4 chr20 42942991 42943242 -23724763 + AluSg SINE Alu 47 296 -14 599 343 68 12 chr20 42944116 42944516 -23723489 - L3 LINE CR1 -20 1557 1136 422 174 0 54 chr20 42944654 42944746 -23723259 + MLT1B LTR MaLR 1 87 -303 2231 120 0 3 chr20 42944752 42945053 -23722952 - AluSg SINE Alu -10 300 1 4450 102 46 25 chr20 42945073 42945790 -23722215 - L1MA3 LINE L1 0 6305 5574 1485 152 21 82 chr20 42945792 42945832 -23722173 + MLT1B LTR MaLR 83 124 -266 2333 105 0 0 chr20 42945832 42946126 -23721879 + AluSg SINE Alu 1 294 -16 1485 152 21 82 chr20 42946126 42946413 -23721592 + MLT1B LTR MaLR 124 390 0 770 268 83 61 chr20 42948404 42948717 -23719288 + MLT1I LTR MaLR 86 405 -4 216 213 43 0 chr20 42948790 42948837 -23719168 - L2 LINE L2 -23 3290 3242 1254 283 23 30 chr20 42949512 42949908 -23718097 - LTR16A LTR ERVL -6 444 52 1036 212 10 0 chr20 42949987 42950185 -23717820 + MLT1A1 LTR MaLR 166 365 0 206 288 99 18 chr20 42950214 42950325 -23717680 - MIR SINE MIR -122 140 21 285 309 21 0 chr20 42950725 42950822 -23717183 - MIR SINE MIR -107 155 57 718 195 0 65 chr20 42950859 42951013 -23716992 - MER3 DNA MER1_type -65 144 1 21 0 0 0 chr20 42951107 42951128 -23716877 + AT_rich Low_complexity Low_complexity 1 21 0 191 315 80 75 chr20 42951684 42951897 -23716108 - L3 LINE CR1 -148 1429 1216 367 245 65 50 chr20 42952421 42952560 -23715445 - MIR SINE MIR -114 148 8 271 250 83 33 chr20 42952619 42952739 -23715266 - MIR SINE MIR -117 145 20 23 0 0 0 chr20 42953176 42953199 -23714806 + AT_rich Low_complexity Low_complexity 1 23 0 551 66 53 0 chr20 42953248 42953324 -23714681 - MADE1 DNA Mariner 0 80 1 645 199 0 3 chr20 42953974 42954131 -23713874 - MER58B DNA MER1_type 0 341 27 723 242 0 32 chr20 42954875 42955032 -23712973 - FAM SINE Alu -33 152 1 190 310 184 0 chr20 42955719 42955806 -23712199 - L2 LINE L2 -1 3312 3210 277 262 87 0 chr20 42956234 42956337 -23711668 + MER46C DNA MER2_type 1 112 -226 373 243 10 19 chr20 42956536 42956639 -23711366 + LTR16A1 LTR ERVL 356 457 0 1019 231 54 11 chr20 42956645 42956905 -23711100 + MER46C DNA MER2_type 68 338 0 557 307 94 30 chr20 42957038 42957869 -23710136 + L1M4 LINE L1 3912 4795 -1351 217 154 0 26 chr20 42958072 42958111 -23709894 + GA-rich Low_complexity Low_complexity 3 40 0 1896 183 0 0 chr20 42958395 42958707 -23709298 + AluSx SINE Alu 1 312 0 23 54 0 0 chr20 42959064 42959101 -23708904 + AT_rich Low_complexity Low_complexity 1 37 0 190 279 0 44 chr20 42959110 42959178 -23708827 - MIR SINE MIR -1 261 197 973 162 17 0 chr20 42959577 42959756 -23708249 + MER5A DNA MER1_type 1 182 -7 356 273 49 39 chr20 42959749 42959904 -23708101 - MIR SINE MIR -39 169 5 * 1115 222 14 0 chr20 42960352 42960573 -23707432 + MER58A DNA MER1_type 1 224 0 363 316 181 5 chr20 42960599 42960792 -23707213 + MIR SINE MIR 20 246 -16 250 244 39 0 chr20 42961337 42961415 -23706590 + (CCCA)n Simple_repeat Simple_repeat 2 82 0 203 220 0 34 chr20 42961977 42962036 -23705969 + GA-rich Low_complexity Low_complexity 4 60 0 349 333 27 27 chr20 42962037 42962220 -23705785 - MIR SINE MIR 0 262 80 294 333 10 10 chr20 42962355 42962454 -23705551 - MIR3 SINE MIR -35 173 75 383 316 40 23 chr20 42963190 42963367 -23704638 + MIR SINE MIR 40 219 -43 185 156 0 0 chr20 42963994 42964026 -23703979 - MIR SINE MIR -14 248 217 1857 163 0 28 chr20 42964078 42964397 -23703608 - AluJo SINE Alu 0 312 3 243 268 120 63 chr20 42964677 42964819 -23703186 - L2 LINE L2 -482 2832 2683 1991 67 104 4 chr20 42964926 42965194 -23702811 + AluY SINE Alu 1 295 -16 231 146 0 0 chr20 42966323 42966364 -23701641 + (ATG)n Simple_repeat Simple_repeat 2 42 0 420 259 159 16 chr20 42966364 42966553 -23701452 - MIR SINE MIR 0 262 47 327 49 0 0 chr20 42967963 42968004 -23700001 + (CATA)n Simple_repeat Simple_repeat 4 44 0 186 384 12 0 chr20 42968460 42968546 -23699459 + MIR SINE MIR 34 120 -88 264 293 92 0 chr20 42969235 42969333 -23698672 + MIR SINE MIR 45 150 -85 816 270 91 89 chr20 42969374 42969925 -23698080 + MLT1K LTR MaLR 33 584 -4 216 0 0 0 chr20 42970262 42970286 -23697719 + (A)n Simple_repeat Simple_repeat 1 24 0 351 297 51 8 chr20 42971005 42971123 -23696882 - L2 LINE L2 -1 3312 3190 1037 238 16 12 chr20 42971251 42971507 -23696498 - L1MB7 LINE L1 -1 6183 5927 * 1125 199 158 35 chr20 42971496 42971807 -23696198 + L1MB7 LINE L1 5579 5927 -247 1886 175 0 13 chr20 42972908 42973222 -23694783 + AluJb SINE Alu 1 310 -2 230 325 25 0 chr20 42974638 42974718 -23693287 - MIR3 SINE MIR -32 176 95 598 296 132 52 chr20 42974941 42975289 -23692716 + MLT1J2 LTR MaLR 74 449 -1 1283 216 68 14 chr20 42975587 42975879 -23692126 + L1MD2 LINE L1 5821 6128 -231 507 185 25 33 chr20 42975899 42976148 -23691857 + GA-rich Low_complexity Low_complexity 1 247 0 684 171 43 13 chr20 42976148 42976335 -23691670 + L1MD3 LINE L1 6154 7985 -10 398 317 49 0 chr20 42976483 42976625 -23691380 + L2 LINE L2 3164 3312 -1 388 224 11 17 chr20 42976891 42977070 -23690935 + GA-rich Low_complexity Low_complexity 1 178 0 3568 178 39 86 chr20 42977529 42978333 -23689672 - MLT1A1-int LTR MaLR -655 716 222 1894 138 0 0 chr20 42978333 42978593 -23689412 + AluSx SINE Alu 1 260 -52 3568 178 39 86 chr20 42978593 42978802 -23689203 - MLT1A1-int LTR MaLR -1149 222 5 1741 226 19 3 chr20 42978806 42979165 -23688840 - MLT1A1 LTR MaLR 0 365 1 353 322 52 23 chr20 42979165 42979339 -23688666 + MIR SINE MIR 69 247 -15 240 236 35 0 chr20 42979375 42979440 -23688565 + L1ME2 LINE L1 5878 5947 -217 547 228 78 24 chr20 42979467 42979634 -23688371 + L1ME2 LINE L1 5989 6164 0 216 250 0 0 chr20 42979641 42979693 -23688312 + (TAGG)n Simple_repeat Simple_repeat 1 52 0 405 136 0 0 chr20 42979694 42979760 -23688245 + (TGGA)n Simple_repeat Simple_repeat 2 67 0 355 282 65 0 chr20 42980245 42980369 -23687636 - MIR SINE MIR 0 262 131 1209 208 70 26 chr20 42980563 42980875 -23687130 + L1ME2 LINE L1 5817 6142 -22 301 242 22 11 chr20 42980917 42981008 -23686997 + MIR SINE MIR 36 127 -135 822 91 0 53 chr20 42981963 42982095 -23685910 + 7SK RNA RNA 1 125 -68 390 145 0 0 chr20 42982136 42982198 -23685807 + 7SK RNA RNA 126 187 -6 834 265 155 25 chr20 42982691 42983084 -23684921 + MLT1J2 LTR MaLR 1 444 -6 318 258 86 11 chr20 42983790 42983883 -23684122 - MLT1J2 LTR MaLR -9 441 342 556 254 26 48 chr20 42983941 42984130 -23683875 - MLT1J2 LTR MaLR -242 208 24 345 282 36 18 chr20 42984493 42984603 -23683402 - MIR SINE MIR -60 148 37 1071 191 27 31 chr20 42985412 42985637 -23682368 + MER58A DNA MER1_type 1 224 0 2577 156 46 2 chr20 42985670 42986126 -23681879 + L1MB5 LINE L1 5691 6166 -8 235 146 0 0 chr20 42986173 42986214 -23681791 - L2 LINE L2 -562 2752 2712 1611 162 4 15 chr20 42986316 42986582 -23681423 + AluJo SINE Alu 1 263 -49 353 96 39 0 chr20 42986583 42986635 -23681370 + G-rich Low_complexity Low_complexity 4 57 0 726 148 34 17 chr20 42986643 42986819 -23681186 + GA-rich Low_complexity Low_complexity 1 179 0 2429 60 3 7 chr20 42986859 42987161 -23680844 + AluY SINE Alu 1 301 -10 240 321 0 0 chr20 42988657 42988710 -23679295 + Charlie8 DNA MER1_type 1 53 -2364 556 211 215 63 chr20 42988845 42988881 -23679124 + LTR16A1 LTR ERVL 60 89 -368 6276 37 9 0 chr20 42988881 42989617 -23678388 + L1PA5 LINE L1 5412 6154 0 556 211 215 63 chr20 42989617 42989864 -23678141 + LTR16A1 LTR ERVL 89 386 -71 943 204 11 0 chr20 42989865 42990046 -23677959 + MER5A DNA MER1_type 5 187 -2 2343 87 3 3 chr20 42990139 42990439 -23677566 + AluSp SINE Alu 1 300 -13 366 254 16 24 chr20 42992105 42992207 -23675798 + (TA)n Simple_repeat Simple_repeat 2 104 -22 654 51 0 0 chr20 42992207 42992285 -23675720 + MADE1 DNA Mariner 1 78 -2 366 254 16 24 chr20 42992285 42992308 -23675697 + (TA)n Simple_repeat Simple_repeat 104 126 0 1758 163 7 11 chr20 42992407 42992690 -23675315 - AluJo SINE Alu -30 282 1 509 165 16 41 chr20 42992702 42992823 -23675182 + MER106B DNA MER1_type 938 1055 -4 310 264 0 23 chr20 42993191 42993278 -23674727 - MIR SINE MIR -138 124 40 285 263 59 59 chr20 42993260 42993378 -23674627 + MIR3 SINE MIR 52 169 -39 * 222 345 124 34 chr20 42995366 42995746 -23672259 + L2 LINE L2 2433 2846 -468 221 261 193 94 chr20 42996478 42996830 -23671175 + L2 LINE L2 2926 3312 -1 297 208 0 0 chr20 42997783 42997855 -23670150 + CT-rich Low_complexity Low_complexity 1 72 0 426 303 130 36 chr20 42997989 42998660 -23669345 - L1M4 LINE L1 -1440 4706 3973 1110 290 25 3 chr20 42998759 42999076 -23668929 + MLT1I LTR MaLR 86 409 0 257 229 10 52 chr20 42999102 42999198 -23668807 - L1M4 LINE L1 -2215 3931 3840 613 248 255 46 chr20 42999256 42999562 -23668443 + MLT1J2 LTR MaLR 67 381 -69 333 314 118 57 chr20 42999611 42999840 -23668165 - L1M4 LINE L1 -2317 3829 3587 376 293 71 55 chr20 42999898 43000209 -23667796 - L1M4 LINE L1 -2639 3507 3192 497 293 121 40 chr20 43000226 43000895 -23667110 - L1M4 LINE L1 -3302 2844 2122 3328 126 10 4 chr20 43001323 43001817 -23666188 + LOR1a LTR ERV1 1 497 0 2723 185 60 72 chr20 43001899 43001954 -23666051 - L1MB8 LINE L1 -1 6177 6123 462 36 0 0 chr20 43001954 43002010 -23665995 + (TA)n Simple_repeat Simple_repeat 2 57 0 2088 112 7 0 chr20 43002010 43002295 -23665710 - AluSx SINE Alu -25 287 1 2723 185 60 72 chr20 43002295 43002901 -23665104 - L1MB8 LINE L1 -54 6124 5522 2069 114 57 38 chr20 43002901 43003269 -23664736 - THE1C LTR MaLR 0 375 1 2723 185 60 72 chr20 43003269 43003339 -23664666 - L1MB8 LINE L1 -656 5522 5453 451 230 104 7 chr20 43003431 43003566 -23664439 + L1ME4a LINE L1 5967 6114 -7 185 217 0 0 chr20 43004056 43004102 -23663903 - L2 LINE L2 -3 3310 3265 2564 84 25 8 chr20 43004103 43004461 -23663544 - THE1B LTR MaLR 0 364 1 466 155 42 139 chr20 43005534 43005902 -23662103 - L1ME3 LINE L1 -2 6160 5834 1922 150 37 0 chr20 43006000 43006300 -23661705 - AluSx SINE Alu -1 311 1 1640 160 59 0 chr20 43006504 43006811 -23661194 + L1MA5A LINE L1 5970 6294 -3 414 0 0 0 chr20 43006970 43007016 -23660989 + (TG)n Simple_repeat Simple_repeat 2 47 0 242 162 0 0 chr20 43007019 43007056 -23660949 - MARNA DNA Mariner -391 195 159 420 287 43 21 chr20 43007684 43007872 -23660133 - MIR SINE MIR 0 262 71 699 298 89 78 chr20 43008693 43008907 -23659098 + HAL1 LINE L1 811 1021 -1486 2443 67 0 3 chr20 43008907 43009204 -23658801 - AluY SINE Alu -15 296 1 699 298 89 78 chr20 43009204 43009585 -23658420 + HAL1 LINE L1 1021 1420 -1087 2174 95 17 10 chr20 43009585 43009879 -23658126 + AluSx SINE Alu 1 296 -16 699 298 89 78 chr20 43009879 43010054 -23657951 + HAL1 LINE L1 1420 1591 -916 706 94 17 0 chr20 43010057 43010174 -23657831 + (TC)n Simple_repeat Simple_repeat 2 120 0 231 88 0 0 chr20 43010174 43010208 -23657797 + (CA)n Simple_repeat Simple_repeat 1 34 0 24 0 0 0 chr20 43010269 43010293 -23657712 + AT_rich Low_complexity Low_complexity 1 24 0 334 278 32 79 chr20 43010684 43010900 -23657105 - LTR16C LTR ERVL 0 491 286 981 319 25 22 chr20 43011144 43011548 -23656457 + MLT1I LTR MaLR 5 409 0 570 311 63 58 chr20 43012215 43012716 -23655289 + L2 LINE L2 2632 3129 -184 2333 92 7 0 chr20 43012716 43013022 -23654983 - AluSc SINE Alu -1 308 1 2459 91 7 0 chr20 43013024 43013333 -23654672 - AluSp SINE Alu -2 311 1 570 311 63 58 chr20 43013333 43013475 -23654530 + L2 LINE L2 3129 3294 -19 202 267 116 55 chr20 43013555 43013701 -23654304 - L2 LINE L2 -220 3052 2898 260 219 164 39 chr20 43013929 43014057 -23653948 - MIR SINE MIR -71 191 48 573 170 19 42 chr20 43014222 43014536 -23653469 + CT-rich Low_complexity Low_complexity 1 306 0 554 205 23 16 chr20 43014576 43014883 -23653122 + CT-rich Low_complexity Low_complexity 1 309 0 274 355 25 1 chr20 43015853 43015997 -23652008 + MIR SINE MIR 37 181 -47 588 288 114 0 chr20 43016103 43016287 -23651718 - MIR SINE MIR -22 240 36 518 208 138 0 chr20 43016888 43017018 -23650987 + MIR SINE MIR 2 149 -113 189 74 0 0 chr20 43017175 43017202 -23650803 + (T)n Simple_repeat Simple_repeat 1 27 0 184 409 0 0 chr20 43017978 43018093 -23649912 - MIR SINE MIR -71 137 23 1945 148 7 13 chr20 43018731 43019036 -23648969 + AluSx SINE Alu 2 304 -8 205 340 52 10 chr20 43019312 43019409 -23648596 - L2 LINE L2 -91 3181 3081 219 295 42 32 chr20 43019816 43019911 -23648094 + MIR SINE MIR 111 206 -56 464 276 116 27 chr20 43019976 43020201 -23647804 + MIR SINE MIR 2 246 -16 1176 177 150 74 chr20 43020497 43020836 -23647169 - MLT1A1 LTR MaLR 0 365 1 365 39 0 19 chr20 43020910 43020962 -23647043 + (CA)n Simple_repeat Simple_repeat 1 51 0 590 276 30 10 chr20 43021344 43021547 -23646458 + LTR16C LTR ERVL 285 491 0 827 151 66 34 chr20 43022225 43022387 -23645618 + MER106B DNA MER1_type 3 186 -50 243 0 0 0 chr20 43022387 43022414 -23645591 + (TAA)n Simple_repeat Simple_repeat 1 27 0 827 151 66 34 chr20 43022414 43022467 -23645538 + MER106B DNA MER1_type 186 236 0 397 312 163 5 chr20 43023039 43023254 -23644751 + MIR SINE MIR 2 250 -12 321 228 25 0 chr20 43023416 43023495 -23644510 + MIR SINE MIR 120 200 -62 560 189 110 0 chr20 43023792 43023919 -23644086 + MER5A DNA MER1_type 49 189 0 2006 150 3 0 chr20 43024043 43024336 -23643669 - AluSx SINE Alu -18 294 1 191 364 17 8 chr20 43024745 43024863 -23643142 + MIR3 SINE MIR 4 122 -86 2360 93 3 3 chr20 43025012 43025323 -23642682 + AluSq SINE Alu 1 311 -2 222 174 0 0 chr20 43025323 43025369 -23642636 + GA-rich Low_complexity Low_complexity 1 46 0 24 32 0 0 chr20 43025399 43025430 -23642575 + AT_rich Low_complexity Low_complexity 1 31 0 2305 98 3 0 chr20 43025431 43025726 -23642279 - AluSp SINE Alu -17 296 1 1165 246 122 40 chr20 43026636 43027186 -23640819 + MLT1G1 LTR MaLR 1 595 0 431 295 106 52 chr20 43028191 43028638 -23639367 - L2 LINE L2 -50 3222 2741 1795 179 69 45 chr20 43028638 43029058 -23638947 - MSTB1 LTR MaLR 0 432 3 431 295 106 52 chr20 43029058 43029118 -23638887 - L2 LINE L2 -531 2741 2686 569 295 21 5 chr20 43029123 43029313 -23638692 + L1ME3A LINE L1 5973 6165 -5 2424 82 0 19 chr20 43029894 43030209 -23637796 + AluSg SINE Alu 1 309 -1 932 209 26 22 chr20 43032915 43033145 -23634860 + MIR SINE MIR 5 235 -27 257 303 0 0 chr20 43033608 43033684 -23634321 - MIR SINE MIR 0 262 187 1090 182 16 10 chr20 43034128 43034320 -23633685 + MER20 DNA MER1_type 4 196 -23 182 346 87 8 chr20 43034358 43034485 -23633520 + MIR3 SINE MIR 4 140 -68 280 236 0 0 chr20 43034697 43034752 -23633253 - tRNA-Ile-ATT tRNA tRNA -13 64 10 558 278 126 50 chr20 43035634 43035936 -23632069 - MLT1H LTR MaLR -222 327 3 669 226 195 46 chr20 43036698 43036893 -23631112 - MER58A DNA MER1_type 0 224 1 421 250 20 66 chr20 43037029 43037081 -23630924 - MIR SINE MIR -67 195 142 2243 85 7 10 chr20 43037081 43037374 -23630631 - AluSc SINE Alu -17 292 1 421 250 20 66 chr20 43037374 43037473 -23630532 - MIR SINE MIR -120 142 51 544 204 9 9 chr20 43038632 43038740 -23629265 - FRAM SINE Alu -66 110 3 2528 55 0 0 chr20 43038914 43039207 -23628798 - AluY SINE Alu -18 293 1 2325 248 81 31 chr20 43039483 43040282 -23627723 - L1ME3A LINE L1 -5 6165 5327 495 238 32 24 chr20 43040537 43040663 -23627342 - MIR SINE MIR -130 132 6 674 194 0 0 chr20 43040720 43040844 -23627161 - MER5A DNA MER1_type -65 124 1 230 309 37 0 chr20 43040864 43040945 -23627060 + L2 LINE L2 3187 3270 -2 2479 151 14 28 chr20 43041082 43041470 -23626535 + MSTB LTR MaLR 1 385 -41 2201 99 3 3 chr20 43041470 43041790 -23626215 - AluSq SINE Alu 0 320 1 2479 151 14 28 chr20 43041790 43041832 -23626173 + MSTB LTR MaLR 385 426 0 834 238 134 45 chr20 43042058 43042394 -23625611 + MLT1J LTR MaLR 145 510 -1 276 234 31 0 chr20 43042455 43042519 -23625486 + MIR SINE MIR 84 149 -59 273 216 165 21 chr20 43043290 43043387 -23624618 - L2 LINE L2 0 3313 3203 2071 139 0 13 chr20 43043635 43043936 -23624069 - AluSq SINE Alu -16 297 1 2271 118 3 6 chr20 43044704 43045017 -23622988 + AluSx SINE Alu 1 312 0 241 261 9 126 chr20 43045513 43045624 -23622381 + MLT1J2 LTR MaLR 291 388 -62 2561 60 0 0 chr20 43045778 43046076 -23621929 + AluY SINE Alu 1 298 -13 211 264 28 14 chr20 43047558 43047630 -23620375 + (TATATG)n Simple_repeat Simple_repeat 6 78 0 2891 10 0 0 chr20 43048247 43048554 -23619451 - AluYa5 SINE Alu -4 307 1 357 267 134 71 chr20 43050304 43051052 -23616953 + L1M4 LINE L1 3641 4435 -1711 681 200 34 11 chr20 43051699 43051880 -23616125 + L1ME3 LINE L1 5976 6164 0 704 254 109 80 chr20 43051888 43052100 -23615905 + L1MC5 LINE L1 7027 7231 -730 2519 56 0 10 chr20 43052100 43052402 -23615603 + AluY SINE Alu 1 299 -12 704 254 109 80 chr20 43052402 43052416 -23615589 + L1MC5 LINE L1 7231 7243 -718 957 160 27 37 chr20 43052416 43052604 -23615401 - MER5A DNA MER1_type -3 186 1 704 254 109 80 chr20 43052604 43052883 -23615122 + L1MC5 LINE L1 7243 7512 -449 2797 123 58 13 chr20 43052883 43053347 -23614658 + MER31A LTR ERV1 1 485 0 704 254 109 80 chr20 43053347 43053487 -23614518 + L1MC5 LINE L1 7512 7646 -315 1005 196 4 52 chr20 43053487 43053716 -23614289 - MER20 DNA MER1_type -1 218 1 704 254 109 80 chr20 43053716 43053922 -23614083 + L1MC5 LINE L1 7646 7906 -55 243 292 85 23 chr20 43054075 43054205 -23613800 + L1ME4a LINE L1 5960 6097 -24 423 280 40 24 chr20 43054916 43055041 -23612964 + L2 LINE L2 3185 3311 -2 430 270 33 26 chr20 43055763 43055915 -23612090 - MIR3 SINE MIR -37 171 19 1018 241 14 0 chr20 43055921 43056141 -23611864 + MER58A DNA MER1_type 1 223 -1 234 220 0 0 chr20 43056386 43056445 -23611560 + (CA)n Simple_repeat Simple_repeat 2 60 0 320 294 159 12 chr20 43056601 43056771 -23611234 + MIR SINE MIR 47 241 -21 416 299 47 0 chr20 43057033 43057160 -23610845 + MIR SINE MIR 59 191 -71 256 320 41 8 chr20 43057521 43057643 -23610362 + MIR3 SINE MIR 58 183 -25 288 255 7 5 chr20 43058913 43058997 -23609008 - L1MC/D LINE L1 -410 5752 5666 474 188 0 0 chr20 43059080 43059176 -23608829 + (TG)n Simple_repeat Simple_repeat 2 97 0 1467 253 74 40 chr20 43059816 43060345 -23607660 - MLT1H LTR MaLR -2 547 1 387 282 106 6 chr20 43061555 43061725 -23606280 - MIR SINE MIR -55 207 21 212 229 0 0 chr20 43062062 43062110 -23605895 - L2 LINE L2 0 3272 3225 228 243 207 18 chr20 43062495 43062606 -23605399 - L3 LINE CR1 -36 1541 1410 1317 136 15 4 chr20 43063195 43063423 -23604582 + L1MB8 LINE L1 5886 6115 -63 348 280 80 27 chr20 43063430 43063707 -23604298 + L2 LINE L2 2688 2982 -290 230 320 200 0 chr20 43063742 43063867 -23604138 + L2 LINE L2 3102 3251 -21 255 79 0 0 chr20 43063872 43063910 -23604095 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 248 305 0 0 chr20 43064006 43064088 -23603917 - L3 LINE CR1 -547 1030 949 631 200 53 20 chr20 43065305 43065455 -23602550 + MER69A DNA AcHobo 23 177 0 269 263 40 0 chr20 43065914 43065990 -23602015 + MIR SINE MIR 106 184 -78 280 247 12 25 chr20 43067099 43067180 -23600825 + L2 LINE L2 3191 3270 -2 365 289 96 0 chr20 43068185 43068320 -23599685 + MIR SINE MIR 63 210 -52 369 307 22 7 chr20 43068708 43068845 -23599160 + Charlie8 DNA MER1_type 85 223 -2194 2183 136 0 0 chr20 43069091 43069393 -23598612 - AluSx SINE Alu -10 302 1 2431 74 3 22 chr20 43069661 43069972 -23598033 + AluSp SINE Alu 1 305 -8 2286 113 0 3 chr20 43070216 43070517 -23597488 + AluSp SINE Alu 1 300 -13 302 266 65 29 chr20 43070849 43070988 -23597017 + L1ME4a LINE L1 5966 6109 -12 211 315 0 54 chr20 43071156 43071248 -23596757 + L2 LINE L2 3186 3272 0 319 271 8 85 chr20 43071843 43071972 -23596033 + L1ME4a LINE L1 5901 6019 -102 3106 141 2 0 chr20 43072759 43073254 -23594751 - L1MA8 LINE L1 -1096 5050 4555 * 5904 135 47 13 chr20 43073248 43074461 -23593544 + L1MA8 LINE L1 5028 6291 0 22 35 0 0 chr20 43074461 43074490 -23593515 + AT_rich Low_complexity Low_complexity 1 29 0 370 323 44 19 chr20 43074898 43075056 -23592949 - MIR3 SINE MIR -10 198 37 450 236 35 86 chr20 43075617 43075706 -23592299 - L2 LINE L2 0 3313 3236 1735 141 0 39 chr20 43075706 43076012 -23591993 + AluJb SINE Alu 1 294 -18 450 236 35 86 chr20 43076012 43076096 -23591909 - L2 LINE L2 -77 3236 3149 318 168 15 153 chr20 43076220 43076351 -23591654 - MER94 DNA DNA -21 113 1 2130 236 90 34 chr20 43076378 43077115 -23590890 - L2 LINE L2 -337 2977 2200 548 239 168 38 chr20 43077381 43077590 -23590415 + MIR SINE MIR 13 248 -14 1234 259 4 0 chr20 43077635 43077905 -23590100 - LTR16C LTR ERVL -31 460 190 464 315 28 7 chr20 43078037 43078180 -23589825 + MIR SINE MIR 88 233 -29 207 100 0 0 chr20 43078639 43078669 -23589336 + (A)n Simple_repeat Simple_repeat 1 30 0 268 366 35 35 chr20 43079068 43079300 -23588705 - MIR SINE MIR 0 262 31 422 273 28 74 chr20 43079360 43079536 -23588469 + L1ME3A LINE L1 5951 6118 -52 783 161 0 0 chr20 43079572 43079690 -23588315 - FLAM_C SINE Alu -15 118 1 349 274 98 0 chr20 43079727 43079829 -23588176 + MER58A DNA MER1_type 2 113 0 638 227 171 32 chr20 43080900 43081116 -23586889 - MIR SINE MIR -3 259 14 298 253 171 80 chr20 43081322 43081685 -23586320 + L2 LINE L2 2857 3252 -20 2194 78 0 0 chr20 43081993 43082299 -23585706 + AluY SINE Alu 1 306 0 22 35 0 0 chr20 43082712 43082741 -23585264 + AT_rich Low_complexity Low_complexity 1 29 0 267 230 170 79 chr20 43082906 43083071 -23584934 - L2 LINE L2 0 3313 3134 214 285 69 69 chr20 43083107 43083251 -23584754 - L2 LINE L2 -305 3008 2865 1593 227 25 0 chr20 43083255 43083577 -23584428 - MER58B DNA MER1_type -10 331 2 2346 99 30 51 chr20 43083600 43083794 -23584211 + THE1B LTR MaLR 1 185 -179 2261 80 0 13 chr20 43083794 43084095 -23583910 - AluSq SINE Alu -12 301 5 2346 99 30 51 chr20 43084095 43084272 -23583733 + THE1B LTR MaLR 185 364 0 246 307 193 7 chr20 43084277 43084427 -23583578 - L2 LINE L2 -460 2854 2677 972 111 0 0 chr20 43084544 43084679 -23583326 + AluSp SINE Alu 1 135 -178 2070 110 0 10 chr20 43084679 43084979 -23583026 + AluSx SINE Alu 1 297 -15 400 272 130 0 chr20 43085264 43085426 -23582579 - Tigger8 DNA MER2_type -355 311 129 2265 216 60 41 chr20 43086106 43086688 -23581317 + MLT1E LTR MaLR 1 593 0 516 251 43 97 chr20 43088874 43089081 -23578924 - MIR SINE MIR -41 221 26 450 283 59 16 chr20 43089266 43089453 -23578552 - MIR SINE MIR -48 214 20 233 343 124 25 chr20 43089582 43089783 -23578222 + MIR SINE MIR 32 252 -10 391 272 56 0 chr20 43089940 43090065 -23577940 - L2 LINE L2 0 3313 3182 1055 193 11 0 chr20 43090266 43090453 -23577552 - MER5A DNA MER1_type 0 189 1 386 283 134 37 chr20 43090458 43090645 -23577360 - LTR33 LTR ERVL -273 248 44 * 415 293 37 60 chr20 43090642 43090857 -23577148 + LTR33 LTR ERVL 312 521 0 544 217 0 50 chr20 43091074 43091194 -23576811 - MER81 DNA DNA 0 114 1 785 286 13 21 chr20 43091267 43091501 -23576504 - MIR SINE MIR -4 258 27 1917 60 4 8 chr20 43091506 43091756 -23576249 - AluSp SINE Alu -10 303 55 277 350 48 0 chr20 43092570 43092673 -23575332 + MIR SINE MIR 83 190 -72 593 317 91 9 chr20 43092815 43093045 -23574960 + MIR SINE MIR 3 251 -11 24 0 0 0 chr20 43093490 43093514 -23574491 + AT_rich Low_complexity Low_complexity 1 24 0 317 157 20 0 chr20 43094128 43094179 -23573826 + AluJ/FRAM SINE Alu 227 278 -24 * 321 118 20 0 chr20 43094178 43094229 -23573776 + AluJ/FRAM SINE Alu 227 278 -24 * 324 120 3 0 chr20 43094228 43094279 -23573726 + AluSc SINE Alu 232 275 -24 310 150 67 0 chr20 43094269 43094329 -23573676 + AluJ/FRAM SINE Alu 215 278 -24 * 329 118 20 0 chr20 43094328 43094379 -23573626 + AluJ/FRAM SINE Alu 227 278 -24 * 342 115 19 0 chr20 43094377 43094429 -23573576 + AluJ/FRAM SINE Alu 226 278 -24 342 115 19 0 chr20 43094427 43094479 -23573526 + AluJ/FRAM SINE Alu 226 278 -24 342 115 19 0 chr20 43094477 43094529 -23573476 + AluJ/FRAM SINE Alu 226 278 -24 342 115 19 0 chr20 43094527 43094579 -23573426 + AluJ/FRAM SINE Alu 226 278 -24 323 135 19 0 chr20 43094577 43094629 -23573376 + AluJ/FRAM SINE Alu 226 278 -24 * 342 115 19 0 chr20 43094627 43094679 -23573326 + AluJ/FRAM SINE Alu 226 278 -24 342 115 19 0 chr20 43094677 43094729 -23573276 + AluJ/FRAM SINE Alu 226 278 -24 323 135 19 0 chr20 43094727 43094779 -23573226 + AluJ/FRAM SINE Alu 226 278 -24 * 335 135 19 0 chr20 43094777 43094829 -23573176 + AluJ/FRAM SINE Alu 226 278 -24 335 135 19 0 chr20 43094827 43094879 -23573126 + AluJ/FRAM SINE Alu 226 278 -24 * 342 115 19 0 chr20 43094877 43094929 -23573076 + AluJ/FRAM SINE Alu 226 278 -24 294 192 19 0 chr20 43094927 43094979 -23573026 + AluJ/FRAM SINE Alu 226 278 -24 * 300 242 32 0 chr20 43098478 43098536 -23569469 + MLT1E LTR MaLR 1 60 -482 2604 167 78 16 chr20 43098536 43098987 -23569018 + MLT2B1 LTR ERVL 1 366 -48 231 204 0 0 chr20 43098987 43099041 -23568964 + CT-rich Low_complexity Low_complexity 2 55 0 195 129 0 0 chr20 43099054 43099085 -23568920 + (GA)n Simple_repeat Simple_repeat 2 32 0 1905 147 3 0 chr20 43099107 43099399 -23568606 - AluSq SINE Alu -20 293 1 273 127 0 84 chr20 43099429 43099500 -23568505 + MLT2B1 LTR ERVL 443 507 -8 1366 258 108 21 chr20 43099508 43099943 -23568062 + MLT1E LTR MaLR 57 529 -64 28 48 0 0 chr20 43100419 43100461 -23567544 + AT_rich Low_complexity Low_complexity 1 42 0 270 264 73 36 chr20 43100466 43100576 -23567429 + L1MC4 LINE L1 6865 6978 -1064 1881 149 0 7 chr20 43101028 43101329 -23566676 - AluSx SINE Alu -13 299 1 221 0 35 0 chr20 43101470 43101499 -23566506 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 443 323 30 10 chr20 43101633 43101834 -23566171 - L1MC/D LINE L1 -2187 5621 5417 471 341 90 14 chr20 43101922 43102145 -23565860 - MIR SINE MIR -1 261 22 1843 212 88 53 chr20 43102170 43102759 -23565246 - L1MB7 LINE L1 -39 6145 5536 1967 127 0 10 chr20 43103043 43103335 -23564670 + AluSc SINE Alu 1 289 -20 1972 127 10 0 chr20 43104292 43104591 -23563414 + AluSx SINE Alu 5 306 -6 752 315 22 1 chr20 43104719 43104955 -23563050 - MIR SINE MIR -21 241 3 201 154 0 0 chr20 43107132 43107171 -23560834 + CT-rich Low_complexity Low_complexity 1 39 0 210 139 0 0 chr20 43108402 43108438 -23559567 + (CGGGGG)n Simple_repeat Simple_repeat 6 41 0 26 30 0 0 chr20 43108556 43108589 -23559416 + GC_rich Low_complexity Low_complexity 1 33 0 291 54 0 0 chr20 43108606 43108643 -23559362 + (CCG)n Simple_repeat Simple_repeat 2 38 0 191 403 7 13 chr20 43109960 43110109 -23557896 - MER5B DNA MER1_type 0 178 31 217 296 0 14 chr20 43110113 43110184 -23557821 - L2 LINE L2 -8 3305 3236 183 229 146 0 chr20 43111417 43111465 -23556540 + MIR SINE MIR 81 135 -127 356 252 84 15 chr20 43111574 43111705 -23556300 - L2 LINE L2 -3 3310 3171 276 236 17 20 chr20 43111900 43111977 -23556028 - MIR SINE MIR -30 178 104 644 193 64 21 chr20 43112079 43112219 -23555786 - MER3 DNA MER1_type -63 146 1 509 189 0 0 chr20 43112247 43112337 -23555668 + MER58A DNA MER1_type 29 118 0 1026 226 32 5 chr20 43112373 43112590 -23555415 + MER58A DNA MER1_type 1 223 -1 1064 173 22 0 chr20 43112642 43112821 -23555184 + MER5A DNA MER1_type 7 189 0 329 227 42 59 chr20 43113685 43113804 -23554201 - L3 LINE CR1 -360 1217 1101 408 303 74 6 chr20 43113821 43113996 -23554009 + MIR SINE MIR 44 230 -32 2251 90 3 0 chr20 43114631 43114932 -23553073 + AluSx SINE Alu 1 302 -10 346 329 9 64 chr20 43115013 43115232 -23552773 + L2 LINE L2 2615 2821 -493 1823 151 3 10 chr20 43115240 43115539 -23552466 - AluSx SINE Alu -15 297 1 282 309 41 0 chr20 43115609 43115706 -23552299 - L2 LINE L2 -283 2989 2889 187 276 124 81 chr20 43115725 43115910 -23552095 + L2 LINE L2 2828 3020 -252 233 366 65 0 chr20 43115986 43116109 -23551896 + L2 LINE L2 3132 3262 -10 299 233 302 0 chr20 43117025 43117141 -23550864 - MER5B DNA MER1_type 0 178 28 393 191 0 45 chr20 43117434 43117523 -23550482 + MER5A DNA MER1_type 96 180 -9 823 252 74 95 chr20 43117676 43118192 -23549813 - MLT1K LTR MaLR 0 588 84 2137 62 48 7 chr20 43118260 43118551 -23549454 + AluY SINE Alu 1 303 -8 1933 142 0 0 chr20 43118670 43118966 -23549039 - AluSx SINE Alu -16 296 1 288 225 217 8 chr20 43119073 43119193 -23548812 - MIR SINE MIR -22 240 96 259 204 20 0 chr20 43120016 43120065 -23547940 - MIR SINE MIR -107 155 106 368 276 147 6 chr20 43121218 43121374 -23546631 + MIR SINE MIR 85 262 0 288 323 21 0 chr20 43121388 43121484 -23546521 - MLT1K LTR MaLR 0 588 491 1375 241 91 50 chr20 43121491 43121988 -23546017 - LTR33A LTR ERVL -5 518 2 438 256 128 23 chr20 43122218 43122351 -23545654 - MLT1K LTR MaLR -360 228 82 1709 261 30 8 chr20 43122425 43122820 -23545185 + MLT1I LTR MaLR 1 404 -5 505 271 149 14 chr20 43123050 43123264 -23544741 - MIR SINE MIR 0 262 20 630 227 23 0 chr20 43123449 43123581 -23544424 - MLT1I LTR MaLR -272 137 3 310 314 38 13 chr20 43124220 43124379 -23543626 - L2 LINE L2 -4 3309 3147 2804 120 34 7 chr20 43125055 43125472 -23542533 - MSTA LTR MaLR 0 428 1 231 335 16 73 chr20 43126465 43126656 -23541349 + MIR3 SINE MIR 24 203 -5 596 203 122 0 chr20 43127384 43127507 -23540498 + MIR SINE MIR 3 140 -122 1458 204 49 17 chr20 43127554 43127898 -23540107 + MLT1A1 LTR MaLR 11 365 0 1061 268 117 51 chr20 43128040 43128260 -23539745 - L2 LINE L2 -2 3311 3107 2179 108 0 0 chr20 43128260 43128555 -23539450 + AluSx SINE Alu 1 295 -17 1061 268 117 51 chr20 43128555 43128897 -23539108 - L2 LINE L2 -206 3107 2717 311 239 52 67 chr20 43129129 43129263 -23538742 - L2 LINE L2 0 3272 3141 380 218 0 23 chr20 43129630 43129717 -23538288 - MIR SINE MIR -5 257 173 995 226 113 115 chr20 43129732 43130193 -23537812 + LTR16C LTR ERVL 32 491 0 464 246 16 120 chr20 43130210 43130393 -23537612 - MIR SINE MIR -97 165 2 245 224 0 35 chr20 43131542 43131627 -23536378 + GA-rich Low_complexity Low_complexity 4 85 0 1170 292 41 14 chr20 43131972 43132339 -23535666 - MLT1I LTR MaLR -16 393 17 1409 186 164 14 chr20 43132339 43132710 -23535295 + MSTC LTR MaLR 1 427 -1 2363 125 31 0 chr20 43133078 43133430 -23534575 + THE1B LTR MaLR 2 364 0 198 0 0 0 chr20 43133469 43133491 -23534514 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 699 258 63 84 chr20 43133923 43134330 -23533675 + LTR16A1 LTR ERVL 73 452 -5 570 324 32 88 chr20 43134335 43134777 -23533228 - L2 LINE L2 -27 3245 2829 1171 282 134 12 chr20 43135107 43135526 -23532479 - LTR16C LTR ERVL -5 486 17 1772 217 24 31 chr20 43136068 43136487 -23531518 - LTR16C LTR ERVL -2 489 74 183 308 39 64 chr20 43136641 43136719 -23531286 - MIR3 SINE MIR -31 177 102 313 337 22 0 chr20 43137237 43137329 -23530676 + L2 LINE L2 3178 3271 -1 563 334 101 43 chr20 43137494 43137661 -23530344 - L2 LINE L2 -1 3271 3115 1990 206 84 50 chr20 43137661 43138206 -23529799 + MLT1F1 LTR MaLR 2 565 -2 563 334 101 43 chr20 43138206 43138573 -23529432 - L2 LINE L2 -157 3115 2703 1007 256 87 64 chr20 43138946 43139383 -23528622 - LTR16A1 LTR ERVL -10 447 1 900 276 29 16 chr20 43139733 43139976 -23528029 + MIR SINE MIR 7 252 -10 420 262 128 24 chr20 43140385 43140549 -23527456 - MIR SINE MIR -5 257 77 1720 161 7 23 chr20 43140842 43141152 -23526853 + 7SLRNA srpRNA srpRNA 1 305 -15 1276 278 44 17 chr20 43141221 43141631 -23526374 - LTR16C LTR ERVL 0 491 71 449 239 114 36 chr20 43141731 43141898 -23526107 - MIR SINE MIR -81 181 2 1254 226 37 34 chr20 43141990 43142339 -23525666 - L1MA9 LINE L1 -38 6274 5925 723 260 36 0 chr20 43142674 43142870 -23525135 + MIR SINE MIR 45 247 -15 208 204 0 23 chr20 43142836 43142880 -23525125 + L2 LINE L2 3259 3301 -12 * 420 20 0 0 chr20 43142996 43143045 -23524960 + (TG)n Simple_repeat Simple_repeat 1 49 0 1315 133 0 0 chr20 43143829 43144024 -23523981 - AluSg/x SINE Alu -14 296 102 356 292 58 0 chr20 43144043 43144163 -23523842 - MIR SINE MIR -91 171 45 470 82 0 0 chr20 43144338 43144399 -23523606 - Alu SINE Alu -256 62 2 959 261 36 12 chr20 43144835 43145084 -23522921 - MIR SINE MIR -5 257 3 392 311 53 0 chr20 43145168 43145300 -23522705 - MIR SINE MIR -7 255 117 185 282 0 0 chr20 43145416 43145455 -23522550 - MIR SINE MIR -176 86 48 35 92 0 0 chr20 43145529 43145627 -23522378 + AT_rich Low_complexity Low_complexity 1 98 0 1792 158 13 0 chr20 43145774 43146085 -23521920 - L1MA4 LINE L1 -6 6294 5980 882 115 0 14 chr20 43146087 43146226 -23521779 - AluSg/x SINE Alu 0 309 173 294 81 99 0 chr20 43146226 43146284 -23521721 - L1MA3 LINE L1 -309 5996 5925 3637 192 60 28 chr20 43146453 43147301 -23520704 - L1MC4a LINE L1 0 7808 6934 419 319 45 30 chr20 43147333 43147669 -23520336 - L1M4 LINE L1 -1314 4832 4492 2195 88 0 39 chr20 43147824 43148132 -23519873 - AluSc SINE Alu -13 296 1 1286 294 200 19 chr20 43148152 43148869 -23519136 - L2 LINE L2 0 3313 2471 1693 169 3 10 chr20 43149044 43149352 -23518653 + AluJb SINE Alu 1 306 -6 310 308 47 9 chr20 43150250 43150357 -23517648 + MIR3 SINE MIR 82 192 -16 1546 217 110 17 chr20 43151596 43151772 -23516233 + MLT1C LTR MaLR 10 168 -299 270 0 0 0 chr20 43151772 43151802 -23516203 + (CA)n Simple_repeat Simple_repeat 2 31 0 1546 217 110 17 chr20 43151802 43152044 -23515961 + MLT1C LTR MaLR 168 467 0 334 351 73 33 chr20 43152267 43152477 -23515528 + MIR SINE MIR 2 225 -37 2248 167 10 10 chr20 43152477 43152867 -23515138 + MLT1B LTR MaLR 1 390 0 334 351 73 33 chr20 43152867 43152901 -23515104 + MIR SINE MIR 225 256 -6 189 0 0 0 chr20 43152938 43152959 -23515046 + (TA)n Simple_repeat Simple_repeat 1 21 0 1986 131 0 3 chr20 43152960 43153257 -23514748 - AluSx SINE Alu -16 296 1 2096 240 59 50 chr20 43153282 43154016 -23513989 + HsTC2a DNA MER2_type 5 744 0 386 232 112 27 chr20 43154018 43154187 -23513818 - MIR SINE MIR -62 146 6 698 259 57 0 chr20 43154772 43154930 -23513075 - MER5A DNA MER1_type -22 167 1 438 165 72 21 chr20 43155110 43155207 -23512798 + MIR SINE MIR 94 195 -67 27 29 0 0 chr20 43155296 43155330 -23512675 + AT_rich Low_complexity Low_complexity 1 34 0 239 259 0 12 chr20 43155641 43155722 -23512283 + CT-rich Low_complexity Low_complexity 2 81 0 422 313 48 20 chr20 43155854 43156001 -23512004 + MIR SINE MIR 1 151 -111 1035 184 45 0 chr20 43156040 43156219 -23511786 - MSTC LTR MaLR -8 420 234 245 206 206 0 chr20 43156398 43156466 -23511539 + MER91C DNA MER1_type 37 118 -22 370 232 11 32 chr20 43156626 43156721 -23511284 - MIR SINE MIR 0 262 170 226 244 0 0 chr20 43156725 43156766 -23511239 - MIR SINE MIR -206 56 16 355 274 62 9 chr20 43156868 43156981 -23511024 - MIR SINE MIR -112 150 32 523 215 154 3 chr20 43157627 43157840 -23510165 + MLT1J2 LTR MaLR 66 302 -148 1998 134 46 52 chr20 43158351 43158717 -23509288 - THE1B LTR MaLR 0 364 1 182 235 0 0 chr20 43158926 43158960 -23509045 + L2 LINE L2 2938 2971 -301 234 258 16 16 chr20 43158986 43159048 -23508957 + MLT1K LTR MaLR 4 65 -523 772 127 0 0 chr20 43159269 43159379 -23508626 + AluSg/x SINE Alu 190 299 -13 527 237 32 58 chr20 43159390 43159437 -23508568 + MLT1K LTR MaLR 411 458 -130 1461 240 37 56 chr20 43159437 43159899 -23508106 + LTR16A1 LTR ERVL 5 457 0 527 237 32 58 chr20 43159899 43160007 -23507998 + MLT1K LTR MaLR 458 562 -26 526 323 10 30 chr20 43160827 43161028 -23506977 - MIR SINE MIR -64 198 2 365 213 74 25 chr20 43161375 43161497 -23506508 + MIR SINE MIR 125 252 -10 237 273 15 0 chr20 43161528 43161594 -23506411 - MIR SINE MIR -65 143 77 1878 141 56 24 chr20 43162729 43163070 -23504935 + L1MB5 LINE L1 5813 6164 -10 2187 93 0 0 chr20 43163086 43163375 -23504630 + AluSg1 SINE Alu 3 291 -18 340 240 220 20 chr20 43163954 43164104 -23503901 - MIR SINE MIR -51 211 32 230 320 74 8 chr20 43164192 43164314 -23503691 + L2 LINE L2 3138 3267 -5 499 330 195 14 chr20 43164671 43165020 -23502985 + L3 LINE CR1 727 1138 -439 241 336 112 61 chr20 43165398 43165809 -23502196 + L2 LINE L2 2841 3272 0 241 215 21 0 chr20 43165811 43165904 -23502101 + (TGGA)n Simple_repeat Simple_repeat 4 98 0 1070 272 164 3 chr20 43166241 43166612 -23501393 - LTR16A LTR ERVL -4 446 16 332 237 21 0 chr20 43166693 43166786 -23501219 + (TGGA)n Simple_repeat Simple_repeat 4 98 0 990 271 71 16 chr20 43166799 43167438 -23500567 - HERV16 LTR ERVL -3938 1058 358 1356 191 22 4 chr20 43167472 43167739 -23500266 - AluJb SINE Alu -40 272 1 303 247 35 12 chr20 43167749 43167834 -23500171 - HERV16 LTR ERVL -4644 352 266 247 282 39 0 chr20 43168048 43168126 -23499879 - LTR16A LTR ERVL 0 450 370 890 256 111 23 chr20 43168198 43168549 -23499456 - MLT1J2 LTR MaLR -63 387 6 1474 280 98 24 chr20 43169695 43170087 -23497918 + LTR16C LTR ERVL 6 438 -53 2170 52 44 0 chr20 43170087 43170396 -23497609 + AluY SINE Alu 1 321 0 1474 280 98 24 chr20 43170396 43170452 -23497553 + LTR16C LTR ERVL 438 488 -3 216 67 0 0 chr20 43170648 43170678 -23497327 + (CA)n Simple_repeat Simple_repeat 1 30 0 418 211 10 19 chr20 43170939 43171043 -23496962 + L1MD2 LINE L1 6240 6342 -17 293 299 30 26 chr20 43171194 43171425 -23496580 + HAL1 LINE L1 1093 1324 -1183 275 199 130 137 chr20 43172133 43172279 -23495726 - MER102b DNA MER1_type 0 341 197 190 327 0 0 chr20 43172453 43172508 -23495497 + L2 LINE L2 3223 3277 -36 393 250 121 14 chr20 43172582 43172722 -23495283 - MIR SINE MIR -74 188 34 207 261 62 54 chr20 43172864 43172994 -23495011 + L2 LINE L2 2568 2698 -616 258 303 60 72 chr20 43173078 43173329 -23494676 + L2 LINE L2 2811 3058 -214 365 283 102 24 chr20 43173590 43173720 -23494285 - MIR SINE MIR -56 206 59 1119 75 0 44 chr20 43173720 43173879 -23494126 + L1PA11 LINE L1 6022 6173 -1 365 283 102 24 chr20 43173879 43173914 -23494091 - MIR SINE MIR -203 59 28 226 298 75 11 chr20 43173967 43174061 -23493944 - L3 LINE CR1 -337 1240 1141 367 145 16 0 chr20 43174263 43174325 -23493680 - L1MB7 LINE L1 -234 5950 5888 822 170 15 0 chr20 43174337 43174472 -23493533 + L1MB7 LINE L1 5990 6126 -58 632 168 44 7 chr20 43174468 43174605 -23493400 - L1MB3 LINE L1 -1 6182 6041 350 122 0 0 chr20 43174605 43174654 -23493351 - MLT2C1 LTR ERVL 0 397 349 2952 152 9 6 chr20 43174664 43175131 -23492874 - Tigger3(Golem) DNA MER2_type -1 3028 2561 1874 114 89 0 chr20 43175226 43175507 -23492498 - AluSq SINE Alu -7 306 1 289 113 0 19 chr20 43175510 43175563 -23492442 + L1MB7 LINE L1 6114 6165 -19 253 250 8 70 chr20 43175594 43175722 -23492283 + L1MC4 LINE L1 7522 7641 -401 442 304 119 57 chr20 43175845 43176230 -23491775 + MLT1J LTR MaLR 103 511 0 514 244 28 68 chr20 43176252 43176428 -23491577 + MIR SINE MIR 94 262 0 2639 25 0 13 chr20 43176525 43176840 -23491165 + AluYa5 SINE Alu 1 311 0 1249 117 0 0 chr20 43176840 43177020 -23490985 + AluSc SINE Alu 124 303 -6 397 321 9 0 chr20 43177137 43177243 -23490762 + MIR SINE MIR 5 111 -151 506 168 42 0 chr20 43177245 43177340 -23490665 + MSTA LTR MaLR 2 100 -326 2108 168 59 35 chr20 43177340 43177876 -23490129 + MLT2A2 LTR ERVL 1 553 -1 1878 138 41 11 chr20 43177877 43178181 -23489824 + MSTA LTR MaLR 105 428 0 536 208 67 0 chr20 43178181 43178301 -23489704 + MIR SINE MIR 109 236 -26 474 96 0 0 chr20 43178426 43178499 -23489506 + (TGGA)n Simple_repeat Simple_repeat 4 76 0 2137 106 3 3 chr20 43178679 43178980 -23489025 - AluSc SINE Alu -8 301 1 257 298 135 10 chr20 43179578 43179682 -23488323 - MIR SINE MIR -115 147 31 311 259 95 54 chr20 43180093 43180240 -23487765 - L2 LINE L2 0 3313 3161 568 280 32 16 chr20 43180327 43180516 -23487489 - MIR SINE MIR -70 192 1 274 299 0 23 chr20 43181112 43181199 -23486806 + MARNA DNA Mariner 44 128 -458 204 97 0 0 chr20 43181934 43181965 -23486040 + (TC)n Simple_repeat Simple_repeat 2 32 0 245 290 103 19 chr20 43182989 43183096 -23484909 - MIR3 SINE MIR -6 202 87 389 294 106 69 chr20 43183147 43183422 -23484583 - MARNA DNA Mariner -254 332 48 2358 77 0 0 chr20 43183465 43183776 -23484229 + AluY SINE Alu 1 311 0 620 254 76 63 chr20 43183892 43184307 -23483698 - L1MC4a LINE L1 -109 6012 5591 882 263 16 12 chr20 43184460 43184703 -23483302 - LTR16B LTR ERVL -3 461 218 258 191 0 0 chr20 43184827 43184869 -23483136 - LTR16A LTR ERVL -407 43 2 2042 113 0 49 chr20 43185004 43185333 -23482672 - AluSq SINE Alu 0 313 1 322 333 18 0 chr20 43187628 43187739 -23480266 + MIR3 SINE MIR 77 189 -19 260 349 65 29 chr20 43187753 43188060 -23479945 - L2 LINE L2 -339 2975 2658 486 313 127 50 chr20 43188062 43188847 -23479158 - L2 LINE L2 -886 2428 1583 197 234 149 43 chr20 43188939 43189033 -23478972 + L2 LINE L2 3119 3222 -91 705 231 58 44 chr20 43189039 43189264 -23478741 + L2 LINE L2 3084 3311 -2 351 245 0 33 chr20 43189307 43189418 -23478587 + GA-rich Low_complexity Low_complexity 2 106 -73 2127 121 0 6 chr20 43189418 43189731 -23478274 + AluSx SINE Alu 1 311 -1 351 245 0 33 chr20 43189731 43189803 -23478202 + GA-rich Low_complexity Low_complexity 106 179 0 461 316 58 23 chr20 43189876 43190050 -23477955 - MIR SINE MIR -34 228 49 439 191 287 0 chr20 43191023 43191138 -23476867 - MIR SINE MIR -7 255 108 296 252 203 49 chr20 43191658 43191781 -23476224 - MIR3 SINE MIR -55 153 12 654 298 18 18 chr20 43192001 43192226 -23475779 + L2 LINE L2 2865 3089 -224 827 239 33 5 chr20 43192228 43192412 -23475593 - MER5A DNA MER1_type 0 189 1 623 268 33 47 chr20 43192422 43192635 -23475370 + L2 LINE L2 3104 3313 0 1038 162 10 13 chr20 43192696 43193003 -23475002 + (TGGA)n Simple_repeat Simple_repeat 4 307 0 215 208 0 21 chr20 43193289 43193337 -23474668 + CT-rich Low_complexity Low_complexity 3 49 0 191 402 71 6 chr20 43193622 43193791 -23474214 - L2 LINE L2 -1921 1393 1214 1136 181 143 3 chr20 43193854 43194086 -23473919 - MLT1D LTR MaLR -2 503 248 255 157 0 0 chr20 43194098 43194149 -23473856 + CT-rich Low_complexity Low_complexity 1 51 0 296 237 11 118 chr20 43194386 43194479 -23473526 + MIR SINE MIR 76 145 -63 * 388 275 211 0 chr20 43194476 43194618 -23473387 - MIR SINE MIR -3 259 88 316 315 150 31 chr20 43194670 43194956 -23473049 + L2 LINE L2 877 1196 -2118 224 233 155 9 chr20 43195012 43195128 -23472877 - L2 LINE L2 -557 2757 2625 2204 132 30 48 chr20 43195191 43195562 -23472443 - THE1B LTR MaLR 0 364 1 269 330 22 0 chr20 43195660 43195751 -23472254 + MIR SINE MIR 41 133 -75 2312 148 3 0 chr20 43196371 43196736 -23471269 + MER47A DNA MER2_type 1 366 0 1645 255 56 7 chr20 43198224 43198632 -23469373 - MLT1J2 LTR MaLR -2 448 21 183 314 59 0 chr20 43198682 43198733 -23469272 + L2 LINE L2 3138 3191 -81 180 281 94 0 chr20 43199065 43199129 -23468876 - MIR SINE MIR -75 187 118 745 250 11 106 chr20 43199458 43199722 -23468283 + MER102a DNA MER1_type 92 330 0 390 298 97 0 chr20 43199768 43199892 -23468113 - L2 LINE L2 0 3272 3137 1067 260 99 6 chr20 43200065 43200377 -23467628 + LTR16C LTR ERVL 151 491 0 1910 133 0 0 chr20 43201259 43201713 -23466292 + AluSq SINE Alu 1 454 0 22 0 0 0 chr20 43202754 43202776 -23465229 + AT_rich Low_complexity Low_complexity 1 22 0 2010 127 7 0 chr20 43202856 43203155 -23464850 + AluSx SINE Alu 12 312 0 1409 217 76 37 chr20 43203677 43204115 -23463890 - MER66A LTR ERV1 0 478 125 348 24 0 0 chr20 43204464 43204505 -23463500 + (CA)n Simple_repeat Simple_repeat 1 41 0 1213 276 98 40 chr20 43205013 43205816 -23462189 + HAL1b LINE L1 37 886 -462 22 0 0 0 chr20 43205893 43205915 -23462090 + AT_rich Low_complexity Low_complexity 1 22 0 2231 80 0 3 chr20 43205919 43206205 -23461800 + AluSc SINE Alu 1 285 -24 264 237 97 21 chr20 43206394 43206487 -23461518 + LTR67 LTR ERVL 77 176 -381 * 753 223 244 4 chr20 43206407 43206636 -23461369 + MLT1J LTR MaLR 92 375 -136 3471 130 15 13 chr20 43206672 43206795 -23461210 - MER1A DNA MER1_type -2173 527 406 1844 148 10 13 chr20 43206795 43207105 -23460900 - AluSx SINE Alu -1 311 3 3471 130 15 13 chr20 43207105 43207504 -23460501 - MER1A DNA MER1_type -2294 406 4 2185 136 63 0 chr20 43207592 43207975 -23460030 + L1MB4 LINE L1 5774 6180 0 857 156 120 36 chr20 43208090 43208282 -23459723 - MER3 DNA MER1_type 0 209 2 675 327 156 45 chr20 43208293 43208449 -23459556 + L2 LINE L2 2257 2394 -920 2067 102 27 7 chr20 43208449 43208742 -23459263 + AluSx SINE Alu 1 299 -13 675 327 156 45 chr20 43208742 43209187 -23458818 + L2 LINE L2 2394 2925 -389 369 0 0 0 chr20 43209404 43209445 -23458560 + (TG)n Simple_repeat Simple_repeat 1 41 0 252 246 82 0 chr20 43209493 43209554 -23458451 + L2 LINE L2 3210 3275 -38 517 241 152 25 chr20 43210678 43210836 -23457169 + MER5A DNA MER1_type 9 186 -3 276 371 29 6 chr20 43211028 43211198 -23456807 - MIR SINE MIR -12 250 77 1137 259 50 20 chr20 43211353 43211751 -23456254 - LTR16A1 LTR ERVL -30 427 18 553 249 11 0 chr20 43211764 43211941 -23456064 + (TG)n Simple_repeat Simple_repeat 2 180 0 1114 213 30 0 chr20 43212487 43212684 -23455321 + MIR SINE MIR 36 238 -24 203 365 0 0 chr20 43212651 43212714 -23455291 + L2 LINE L2 3251 3313 0 * 181 161 0 0 chr20 43213087 43213118 -23454887 + MER5A DNA MER1_type 21 51 -138 1800 156 30 73 chr20 43213123 43213288 -23454717 + MLT1B LTR MaLR 36 207 -183 2172 112 0 0 chr20 43213288 43213591 -23454414 + AluSx SINE Alu 1 303 -9 1800 156 30 73 chr20 43213591 43213796 -23454209 + MLT1B LTR MaLR 207 390 0 430 311 62 0 chr20 43213800 43213961 -23454044 - MIR SINE MIR -25 237 67 4105 130 24 13 chr20 43214332 43214969 -23453036 + LTR9B LTR ERV1 1 644 0 229 176 11 121 chr20 43215411 43215502 -23452503 - L1ME4a LINE L1 -42 6079 5999 311 294 172 22 chr20 43215681 43215861 -23452144 + MLT1J LTR MaLR 100 306 -205 466 260 46 29 chr20 43215971 43216144 -23451861 + MLT1J LTR MaLR 328 503 -8 466 287 25 42 chr20 43216146 43216383 -23451622 - L1ME4a LINE L1 -272 5849 5617 613 291 52 0 chr20 43216598 43216770 -23451235 + MIR SINE MIR 82 262 0 727 338 90 42 chr20 43216770 43216998 -23451007 - HAL1b LINE L1 -549 799 584 2069 106 0 0 chr20 43216998 43217311 -23450694 - AluSc SINE Alu 0 313 1 727 338 90 42 chr20 43217311 43217635 -23450370 - HAL1b LINE L1 -764 584 219 219 227 0 0 chr20 43217652 43217696 -23450309 + (CTG)n Simple_repeat Simple_repeat 1 44 0 396 327 40 70 chr20 43217873 43218072 -23449933 + L2 LINE L2 2627 2819 -495 460 317 161 5 chr20 43218360 43218559 -23449446 - MIR SINE MIR -13 249 20 453 277 107 45 chr20 43218848 43218916 -23449089 + MLT1J2 LTR MaLR 213 275 -175 1887 94 0 4 chr20 43218916 43219170 -23448835 + AluSc SINE Alu 36 288 -21 453 277 107 45 chr20 43219170 43219325 -23448680 + MLT1J2 LTR MaLR 275 450 0 327 313 35 9 chr20 43219432 43219547 -23448458 + MIR3 SINE MIR 46 163 -45 518 297 26 0 chr20 43220013 43220168 -23447837 - LTR33 LTR ERVL -362 159 1 296 301 164 48 chr20 43220210 43220356 -23447649 + L2 LINE L2 3109 3271 -1 825 310 5 0 chr20 43221049 43221233 -23446772 + MER91A DNA MER1_type 1 185 -11 249 267 93 47 chr20 43222133 43222219 -23445786 + MIR SINE MIR 5 94 -168 2061 184 73 21 chr20 43222219 43222655 -23445350 - LTR2B LTR ERV1 0 490 32 361 273 151 14 chr20 43222870 43223009 -23444996 - MIR3 SINE MIR -29 179 22 315 278 60 49 chr20 43223343 43223629 -23444376 + L1ME1 LINE L1 5759 5916 -250 264 164 82 33 chr20 43223957 43224018 -23443987 + L2 LINE L2 3249 3312 -1 374 251 71 55 chr20 43224098 43224281 -23443724 - L2 LINE L2 -655 2659 2474 2436 134 91 5 chr20 43224685 43225079 -23442926 - MSTA LTR MaLR 0 428 1 1211 126 0 0 chr20 43225079 43225237 -23442768 + FRAM SINE Alu 11 167 -9 2240 105 0 10 chr20 43225237 43225533 -23442472 + AluY SINE Alu 1 293 -18 1974 192 43 45 chr20 43226371 43226877 -23441128 + Charlie4a DNA MER1_type 1 505 -3 1214 227 126 68 chr20 43227026 43227568 -23440437 + MER77 LTR ERV1 50 601 -4 347 281 10 0 chr20 43227743 43227839 -23440166 - MER5A DNA MER1_type -83 106 10 269 114 0 23 chr20 43229039 43229083 -23438922 + MLT1H LTR MaLR 507 549 0 460 318 32 32 chr20 43229549 43229703 -23438302 + L2 LINE L2 3117 3270 -2 260 276 9 0 chr20 43229731 43229836 -23438169 + GA-rich Low_complexity Low_complexity 3 108 0 201 132 0 0 chr20 43229854 43229892 -23438113 + (TGGA)n Simple_repeat Simple_repeat 1 38 0 749 243 32 0 chr20 43230418 43230603 -23437402 + MIR SINE MIR 43 233 -29 1377 181 48 7 chr20 43230603 43230873 -23437132 + LTR32 LTR ERVL 11 291 -180 1935 87 43 3 chr20 43230915 43230985 -23437020 + L1MA2 LINE L1 5994 6060 -244 1661 159 60 7 chr20 43230985 43231268 -23436737 + AluSx SINE Alu 1 298 -14 1935 87 43 3 chr20 43231268 43231496 -23436509 + L1MA2 LINE L1 6060 6304 0 448 239 22 0 chr20 43231545 43231637 -23436368 + LTR32 LTR ERVL 259 352 -119 229 184 61 0 chr20 43231680 43231729 -23436276 + LTR32 LTR ERVL 317 368 -103 783 169 20 7 chr20 43231733 43231881 -23436124 + LTR32 LTR ERVL 322 471 0 2316 99 3 3 chr20 43232662 43232964 -23435041 - AluSg SINE Alu -8 302 1 249 313 116 9 chr20 43233123 43233235 -23434770 + L3 LINE CR1 1448 1571 -6 341 211 28 0 chr20 43233569 43233640 -23434365 + MIR SINE MIR 58 130 -78 336 291 63 60 chr20 43233648 43233950 -23434055 - MLT1I LTR MaLR -2 407 105 462 288 186 44 chr20 43234176 43234450 -23433555 - L2 LINE L2 -10 3303 2991 629 241 0 8 chr20 43234482 43234615 -23433390 + FLAM_A SINE Alu 11 142 0 305 357 28 11 chr20 43234621 43234803 -23433202 - L2 LINE L2 -284 2988 2804 494 298 13 53 chr20 43235162 43235313 -23432692 + MIR3 SINE MIR 31 175 -33 237 382 15 8 chr20 43235619 43235750 -23432255 - L3 LINE CR1 -20 1557 1426 286 226 16 0 chr20 43235764 43235826 -23432179 + L2 LINE L2 3209 3271 -1 588 242 12 24 chr20 43235962 43236127 -23431878 - LTR16C LTR ERVL -53 438 276 1082 167 92 37 chr20 43236131 43236360 -23431645 + MER33 DNA MER1_type 5 255 -2330 2303 119 3 0 chr20 43236360 43236671 -23431334 - AluSx SINE Alu 0 312 1 1082 167 92 37 chr20 43236671 43236735 -23431270 + MER33 DNA MER1_type 255 314 -10 704 253 58 0 chr20 43236754 43236928 -23431077 - LTR16C LTR ERVL -219 272 89 270 291 68 34 chr20 43237034 43237182 -23430823 - L3 LINE CR1 -335 1242 1090 205 268 14 28 chr20 43237457 43237528 -23430477 - L2 LINE L2 -1884 1430 1361 336 278 21 98 chr20 43237778 43237951 -23430054 - MIR SINE MIR -73 135 30 431 258 57 74 chr20 43238189 43238433 -23429572 + MLT1J1 LTR MaLR 207 446 0 671 188 0 0 chr20 43238441 43238553 -23429452 - LTR53 LTR ERVL -406 113 2 1670 171 69 77 chr20 43239805 43239871 -23428134 - MLT1B LTR MaLR -2 388 323 2044 156 3 3 chr20 43239871 43240179 -23427826 - AluSx SINE Alu -2 310 3 1670 171 69 77 chr20 43240179 43240503 -23427502 - MLT1B LTR MaLR -67 323 1 603 321 170 16 chr20 43240720 43241091 -23426914 + L3 LINE CR1 1085 1512 -65 339 25 0 0 chr20 43241310 43241350 -23426655 + (CA)n Simple_repeat Simple_repeat 1 40 0 1148 207 115 17 chr20 43241507 43241948 -23426057 + MLT1D LTR MaLR 27 505 0 438 289 114 9 chr20 43241948 43242159 -23425846 + MIR SINE MIR 20 252 -10 642 164 0 17 chr20 43242646 43242762 -23425243 - AluJo SINE Alu -23 289 176 438 207 17 69 chr20 43242778 43242894 -23425111 - AluJo SINE Alu -118 194 85 1482 151 43 7 chr20 43243060 43243338 -23424667 - L1MB5 LINE L1 -94 6080 5793 295 171 86 0 chr20 43243338 43243408 -23424597 + MER45A DNA AcHobo 102 177 -1 277 331 21 21 chr20 43243443 43243585 -23424420 + L2 LINE L2 2625 2766 -548 192 295 13 0 chr20 43243622 43243700 -23424305 + L2 LINE L2 2896 2974 -298 2293 93 3 7 chr20 43244159 43244450 -23423555 - AluSp SINE Alu -22 291 2 331 256 0 23 chr20 43245224 43245310 -23422695 + MIR3 SINE MIR 104 187 -21 332 131 0 16 chr20 43245317 43245378 -23422627 + (CA)n Simple_repeat Simple_repeat 2 61 0 2821 129 30 38 chr20 43245821 43246801 -23421204 - L1PA7 LINE L1 -15 6139 5184 1133 193 134 26 chr20 43247373 43247679 -23420326 + MER58B DNA MER1_type 1 339 -2 603 154 14 144 chr20 43247838 43248046 -23419959 - L1MC5 LINE L1 -54 7907 7727 2344 108 3 13 chr20 43248302 43248618 -23419387 + AluSq SINE Alu 1 313 0 2180 128 0 0 chr20 43248978 43249274 -23418731 + AluSg SINE Alu 1 296 -14 2127 164 42 13 chr20 43249388 43249730 -23418275 + MLT2C1 LTR ERVL 3 359 -38 231 36 0 0 chr20 43249730 43249758 -23418247 + (CA)n Simple_repeat Simple_repeat 1 28 0 2127 164 42 13 chr20 43249758 43249799 -23418206 + MLT2C1 LTR ERVL 359 397 0 648 113 57 128 chr20 43249860 43250039 -23417966 + FLAM_C SINE Alu 1 169 0 815 159 38 51 chr20 43250047 43250204 -23417801 - MIR SINE MIR 0 262 108 180 111 0 0 chr20 43251615 43251642 -23416363 + (TTCCC)n Simple_repeat Simple_repeat 5 31 0 322 299 11 0 chr20 43251656 43251743 -23416262 - L2 LINE L2 -16 3256 3169 4221 70 34 26 chr20 43251767 43251856 -23416149 + LTR10C LTR ERV1 1 88 -503 6001 31 1 3 chr20 43251856 43252508 -23415497 + SVA Other Other 732 1382 -4 4221 70 34 26 chr20 43252508 43253004 -23415001 + LTR10C LTR ERV1 88 591 0 673 179 45 26 chr20 43253054 43253210 -23414795 - L2 LINE L2 0 3313 3155 1865 151 126 48 chr20 43253351 43253748 -23414257 + MSTA LTR MaLR 1 428 0 339 365 55 16 chr20 43253804 43254116 -23413889 - L2 LINE L2 -437 2877 2554 1473 183 72 85 chr20 43254171 43254560 -23413445 - MLT1B LTR MaLR -4 386 3 2253 127 26 40 chr20 43254560 43254938 -23413067 + MER83C LTR ERV1 1 373 0 2320 107 3 0 chr20 43254959 43255257 -23412748 + AluSx SINE Alu 2 300 -12 200 264 0 19 chr20 43255681 43255734 -23412271 - MER5A DNA MER1_type -34 155 104 1754 140 22 7 chr20 43256198 43256476 -23411529 - AluJo SINE Alu -22 290 9 5787 67 89 11 chr20 43256492 43257684 -23410321 - SVA Other Other -954 1386 26 201 39 0 0 chr20 43257696 43257722 -23410283 + (GGGAGA)n Simple_repeat Simple_repeat 2 27 0 2360 97 3 0 chr20 43257745 43258045 -23409960 - AluSp SINE Alu -12 301 1 1295 228 14 7 chr20 43258243 43258528 -23409477 + LTR16C LTR ERVL 205 491 0 2115 92 0 4 chr20 43258661 43258934 -23409071 - AluY SINE Alu -1 310 39 3130 177 30 25 chr20 43259089 43259727 -23408278 + L1MB7 LINE L1 5544 6184 0 1775 167 7 7 chr20 43259805 43260098 -23407907 - AluJo SINE Alu -19 293 1 2140 117 0 0 chr20 43260502 43260792 -23407213 - AluSg SINE Alu -20 290 1 249 262 206 9 chr20 43260820 43260927 -23407078 + MIR SINE MIR 129 256 -6 282 308 58 0 chr20 43261018 43261138 -23406867 - MIR3 SINE MIR -4 204 78 544 268 100 26 chr20 43261690 43261880 -23406125 + MIR SINE MIR 49 252 -10 963 292 79 14 chr20 43262118 43262484 -23405521 + LTR16C LTR ERVL 1 390 -101 1401 208 87 77 chr20 43262508 43263057 -23404948 + MER34B LTR ERV1 11 565 0 256 219 94 0 chr20 43263063 43263127 -23404878 + LTR16C LTR ERVL 419 488 -3 579 264 93 101 chr20 43263142 43263736 -23404269 + L2 LINE L2 2268 2856 -458 1838 177 7 7 chr20 43263816 43264116 -23403889 - AluJb SINE Alu -12 300 1 329 269 0 0 chr20 43264329 43264396 -23403609 + L2 LINE L2 3205 3271 -1 478 287 77 21 chr20 43265013 43265156 -23402849 - L2 LINE L2 0 3272 3122 1344 167 117 144 chr20 43265259 43265353 -23402652 + MER67D LTR ERV1 1 96 -418 2009 130 0 3 chr20 43265353 43265638 -23402367 - AluSx SINE Alu -9 303 20 1344 167 117 144 chr20 43265638 43265954 -23402051 + MER67D LTR ERV1 96 397 -117 2463 73 0 19 chr20 43265954 43266271 -23401734 + AluY SINE Alu 1 311 0 1344 167 117 144 chr20 43266271 43266373 -23401632 + MER67D LTR ERV1 397 500 -14 2165 115 0 3 chr20 43266457 43266744 -23401261 + AluSx SINE Alu 23 308 -4 245 190 17 52 chr20 43266784 43266842 -23401163 - L2 LINE L2 -245 3068 3013 697 234 87 24 chr20 43268774 43269026 -23398979 - LTR16C LTR ERVL -6 485 218 1266 218 74 42 chr20 43269030 43269213 -23398792 + MLT1C LTR MaLR 7 183 -284 2093 116 3 24 chr20 43269213 43269550 -23398455 + AluSx SINE Alu 1 331 0 1266 218 74 42 chr20 43269550 43269795 -23398210 + MLT1C LTR MaLR 183 451 -16 2158 72 58 0 chr20 43269870 43270147 -23397858 + AluSc SINE Alu 1 293 -16 2687 157 43 12 chr20 43270549 43271039 -23396966 + MLT1D LTR MaLR 1 505 0 717 262 42 9 chr20 43271069 43271283 -23396722 - LTR16C LTR ERVL 0 491 271 213 173 19 19 chr20 43271395 43271447 -23396558 + CT-rich Low_complexity Low_complexity 4 55 0 1191 199 25 75 chr20 43272733 43272970 -23395035 - MER97a DNA MER1_type? -29 865 655 2072 138 3 3 chr20 43272970 43273275 -23394730 + AluSx SINE Alu 1 305 -7 1191 199 25 75 chr20 43273275 43273439 -23394566 - MER97a DNA MER1_type? -239 655 484 472 96 0 27 chr20 43273439 43273512 -23394493 - Alu SINE Alu -8 304 234 275 260 240 41 chr20 43274329 43274475 -23393530 - L3 LINE CR1 -24 1553 1379 2548 62 7 0 chr20 43274770 43275075 -23392930 + AluY SINE Alu 1 307 -4 2485 75 0 0 chr20 43275084 43275379 -23392626 + AluY SINE Alu 1 295 -16 902 225 39 0 chr20 43275585 43275763 -23392242 - MER5A DNA MER1_type -2 187 3 2648 137 18 32 chr20 43276008 43276446 -23391559 - MSTB1 LTR MaLR 0 432 1 509 131 71 0 chr20 43276538 43276622 -23391383 - MER53 DNA DNA 0 189 100 369 265 133 7 chr20 43277199 43277350 -23390655 - MIR3 SINE MIR -37 171 2 647 308 35 39 chr20 43277369 43277754 -23390251 + L1ME3A LINE L1 5423 5807 -363 437 96 0 160 chr20 43277754 43277848 -23390157 - MADE1 DNA Mariner -1 79 1 647 308 35 39 chr20 43277848 43277897 -23390108 + L1ME3A LINE L1 5807 5855 -315 1995 111 7 7 chr20 43278870 43279168 -23388837 + AluSx SINE Alu 5 302 -10 211 222 0 0 chr20 43279168 43279213 -23388792 - MER5A DNA MER1_type -136 53 9 362 214 79 0 chr20 43279379 43279468 -23388537 + L1ME3 LINE L1 6067 6162 0 1810 142 4 0 chr20 43279994 43280275 -23387730 - AluSx SINE Alu -5 307 26 782 218 69 0 chr20 43280357 43280531 -23387474 - MER5A DNA MER1_type 0 189 4 210 297 40 14 chr20 43280657 43280731 -23387274 + MIR SINE MIR 109 184 -78 369 272 44 67 chr20 43280972 43281152 -23386853 - L2 LINE L2 -112 3160 2985 2153 106 14 0 chr20 43281277 43281570 -23386435 + AluSx SINE Alu 3 299 -13 183 42 0 0 chr20 43281932 43281956 -23386049 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 493 309 33 7 chr20 43282044 43282196 -23385809 + MIR SINE MIR 37 192 -70 424 325 19 12 chr20 43282609 43282769 -23385236 - MIR3 SINE MIR -46 162 2 613 183 57 51 chr20 43283092 43283277 -23384728 + MER51C LTR ERV1 197 613 -3 2137 97 21 0 chr20 43283586 43283876 -23384129 - AluSx SINE Alu -16 296 1 979 206 9 18 chr20 43284261 43284480 -23383525 - MER20 DNA MER1_type -2 217 1 387 296 52 0 chr20 43284782 43284897 -23383108 + L2 LINE L2 3168 3288 -25 275 175 0 16 chr20 43284908 43284971 -23383034 + GA-rich Low_complexity Low_complexity 3 64 0 3670 96 29 16 chr20 43285281 43285822 -23382183 + L1PA16 LINE L1 5597 6147 -19 2057 114 0 3 chr20 43285822 43286121 -23381884 - AluSx SINE Alu -14 298 1 3670 96 29 16 chr20 43286121 43286133 -23381872 + L1PA16 LINE L1 6147 6157 -9 320 248 73 80 chr20 43286314 43286588 -23381417 + L1ME4a LINE L1 5813 6084 -37 2058 114 42 30 chr20 43286591 43286924 -23381081 + MER1B DNA MER1_type 1 337 0 483 202 89 8 chr20 43286956 43287080 -23380925 + MER3 DNA MER1_type 65 198 -11 21135 32 1 0 chr20 43287088 43290377 -23377628 + L1PA3 LINE L1 2858 6155 0 2313 94 7 0 chr20 43290434 43290742 -23377263 - AluSx SINE Alu -2 310 1 2297 94 7 0 chr20 43291792 43292100 -23375905 + AluSg SINE Alu 1 310 0 261 272 11 11 chr20 43292103 43292180 -23375825 - HAL1b LINE L1 -71 1277 1198 1161 176 18 27 chr20 43292180 43292401 -23375604 + MER20 DNA MER1_type 1 219 0 261 272 11 11 chr20 43292401 43292415 -23375590 - HAL1b LINE L1 -149 1199 1186 438 306 88 10 chr20 43292483 43292676 -23375329 - MIR SINE MIR -10 252 45 2197 93 0 0 chr20 43293005 43293294 -23374711 - AluSq SINE Alu -16 297 9 1433 201 10 13 chr20 43293733 43293867 -23374138 + AluJb SINE Alu 1 134 -178 203 61 30 0 chr20 43293867 43293900 -23374105 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 1433 201 10 13 chr20 43293900 43294078 -23373927 + AluJb SINE Alu 134 312 0 382 289 78 87 chr20 43294273 43294938 -23373067 - HAL1b LINE L1 -576 772 114 1167 209 69 52 chr20 43294948 43295167 -23372838 - LTR50 LTR ERVL 0 795 581 1656 171 4 4 chr20 43295167 43295448 -23372557 + AluJb SINE Alu 1 281 -31 1167 209 69 52 chr20 43295448 43295461 -23372544 - LTR50 LTR ERVL -214 581 570 192 40 0 0 chr20 43295461 43295486 -23372519 + (CATA)n Simple_repeat Simple_repeat 2 26 0 1167 209 69 52 chr20 43295486 43295601 -23372404 - LTR50 LTR ERVL -225 570 441 892 231 0 0 chr20 43295704 43295877 -23372128 - MER5B DNA MER1_type -5 173 1 392 184 86 161 chr20 43295938 43296052 -23371953 - MER5B DNA MER1_type -9 169 71 2756 90 5 0 chr20 43296052 43296419 -23371586 - L1PB1 LINE L1 -1 6150 5782 392 184 86 161 chr20 43296419 43296478 -23371527 - MER5B DNA MER1_type -107 71 9 414 0 0 0 chr20 43296733 43296779 -23371226 + (CA)n Simple_repeat Simple_repeat 1 46 0 886 137 0 0 chr20 43296824 43296955 -23371050 + FLAM_C SINE Alu 3 133 0 1133 152 16 5 chr20 43297047 43297231 -23370774 + MER5A DNA MER1_type 4 189 0 2021 123 7 10 chr20 43297339 43297640 -23370365 + AluSx SINE Alu 1 300 -12 569 302 10 26 chr20 43297966 43298158 -23369847 - L3 LINE CR1 -570 1007 819 1135 239 133 42 chr20 43298197 43298657 -23369348 - MLT1H LTR MaLR -3 546 1 490 234 5 0 chr20 43298658 43298773 -23369232 + LTR16C LTR ERVL 338 464 -2 560 264 233 15 chr20 43298781 43299240 -23368765 + L2 LINE L2 2128 2686 -628 220 318 45 0 chr20 43299851 43299917 -23368088 - MIR SINE MIR -85 123 55 860 191 31 46 chr20 43299931 43300125 -23367880 - MER20 DNA MER1_type 0 219 29 2105 156 37 3 chr20 43300166 43300518 -23367487 - THE1B LTR MaLR 0 364 1 926 154 74 17 chr20 43300544 43300719 -23367286 + MER5A DNA MER1_type 2 186 -3 363 284 74 34 chr20 43300737 43300885 -23367120 - MIR SINE MIR -89 173 20 2681 90 62 25 chr20 43301005 43301437 -23366568 + LTR7 LTR ERV1 1 448 -2 304 273 9 36 chr20 43302669 43302779 -23365226 + MIR3 SINE MIR 73 179 -29 1453 169 16 0 chr20 43303345 43303588 -23364417 - Tigger3(Golem) DNA MER2_type -1 3028 2782 2377 87 0 0 chr20 43303642 43303951 -23364054 + AluSq SINE Alu 1 309 -4 352 239 137 26 chr20 43303951 43304068 -23363937 - MIR SINE MIR -25 237 108 2114 110 0 16 chr20 43304174 43304491 -23363514 + AluSx SINE Alu 1 312 0 315 120 0 0 chr20 43304509 43304559 -23363446 + AluSp/q SINE Alu 246 295 -8 190 257 64 55 chr20 43304825 43304934 -23363071 + L2 LINE L2 3007 3116 -156 406 110 14 0 chr20 43304962 43305035 -23362970 - L1PA16 LINE L1 0 6166 6093 876 99 0 0 chr20 43305038 43305159 -23362846 + L1PA15 LINE L1 5768 5888 -277 279 260 117 0 chr20 43305220 43305297 -23362708 + L2 LINE L2 3187 3272 0 1919 158 127 16 chr20 43305518 43305903 -23362102 - MSTA LTR MaLR 0 428 1 1558 249 32 0 chr20 43306152 43306493 -23361512 - LTR16C LTR ERVL -9 482 131 1909 125 50 0 chr20 43306696 43306993 -23361012 + AluSx SINE Alu 1 312 0 487 278 139 41 chr20 43307717 43307962 -23360043 + L2 LINE L2 3004 3272 0 1902 138 14 0 chr20 43308232 43308522 -23359483 + AluSx SINE Alu 1 294 -18 1344 249 171 33 chr20 43309278 43309946 -23358059 - L1MC5 LINE L1 -47 7914 7155 2045 130 7 0 chr20 43309970 43310278 -23357727 - AluSx SINE Alu -2 310 1 348 309 90 33 chr20 43310310 43310657 -23357348 + L1MEc LINE L1 2225 2566 -3649 1698 127 3 50 chr20 43310657 43310976 -23357029 + AluJb SINE Alu 1 305 0 348 309 90 33 chr20 43310976 43311073 -23356932 + L1MEc LINE L1 2566 2656 -3559 1023 307 50 28 chr20 43311280 43311717 -23356288 + MER115 DNA AcHobo 10 456 -237 226 292 31 0 chr20 43312119 43312184 -23355821 + L2 LINE L2 3247 3313 0 1883 185 16 11 chr20 43312353 43312721 -23355284 + MLT1A2 LTR MaLR 5 374 0 1829 171 3 0 chr20 43312734 43313033 -23354972 + AluSx SINE Alu 3 302 -10 2587 189 54 22 chr20 43313035 43313575 -23354430 + MER119 DNA MER1_type 27 583 0 396 250 27 92 chr20 43313577 43313632 -23354373 + MIR SINE MIR 91 148 -114 2010 120 0 13 chr20 43313632 43313940 -23354065 + AluSq SINE Alu 1 304 -9 396 250 27 92 chr20 43313940 43314068 -23353937 + MIR SINE MIR 148 262 0 405 184 119 37 chr20 43314203 43314312 -23353693 + MIR SINE MIR 21 138 -70 816 123 18 0 chr20 43314495 43314609 -23353396 + AluJb SINE Alu 2 117 -195 180 0 0 0 chr20 43314609 43314629 -23353376 + (T)n Simple_repeat Simple_repeat 1 20 0 8119 13 0 0 chr20 43314633 43315789 -23352216 - L1HS LINE L1 -1 6154 4999 1629 167 0 26 chr20 43316737 43317042 -23350963 + AluJo SINE Alu 1 297 -15 702 233 151 6 chr20 43317160 43317319 -23350686 + MIR SINE MIR 32 213 -49 433 309 86 7 chr20 43317799 43317951 -23350054 + MER91A DNA MER1_type 3 166 -30 2202 101 3 0 chr20 43317986 43318284 -23349721 - AluSq SINE Alu -14 299 1 776 157 51 67 chr20 43318555 43318702 -23349303 + MER33 DNA MER1_type 1 146 -2439 1515 143 92 22 chr20 43318702 43318974 -23349031 + AluJb SINE Alu 1 291 -11 776 157 51 67 chr20 43318974 43319004 -23349001 + MER33 DNA MER1_type 146 175 -149 * 2080 217 45 9 chr20 43319002 43319444 -23348561 - MLT1C LTR MaLR -9 458 1 1807 115 0 0 chr20 43319448 43319731 -23348274 - AluSx SINE Alu 0 312 30 18292 41 7 0 chr20 43320065 43323062 -23344943 - L1PA5 LINE L1 0 6154 3145 622 203 7 65 chr20 43323101 43323155 -23344850 - MLT2F LTR ERVL -519 144 88 2310 84 0 0 chr20 43323155 43323453 -23344552 + AluSx SINE Alu 1 298 -14 622 203 7 65 chr20 43323453 43323551 -23344454 - MLT2F LTR ERVL -575 88 1 426 318 56 34 chr20 43323593 43323862 -23344143 + LTR16B LTR ERVL 128 442 -8 693 249 42 8 chr20 43323863 43324100 -23343905 + L1ME LINE L1 729 973 -5097 711 104 10 0 chr20 43324109 43324205 -23343800 + U6 snRNA snRNA 1 97 -10 26 0 0 0 chr20 43324205 43324231 -23343774 + AT_rich Low_complexity Low_complexity 1 26 0 636 269 88 44 chr20 43324231 43324371 -23343634 + L1ME LINE L1 962 1094 -4986 1973 125 0 23 chr20 43324371 43324674 -23343331 + AluSq SINE Alu 1 296 -17 636 269 88 44 chr20 43324674 43324942 -23343063 + L1ME LINE L1 1094 1388 -4692 1362 140 5 14 chr20 43324943 43325165 -23342840 + AluJb SINE Alu 87 306 -6 227 122 41 0 chr20 43325169 43325218 -23342787 + L1ME LINE L1 1409 1459 -4621 995 213 55 44 chr20 43325220 43325702 -23342303 - MLT1E LTR MaLR -13 580 1 1141 249 70 45 chr20 43325705 43325858 -23342147 + L1ME LINE L1 1499 1647 -4433 1644 224 77 10 chr20 43325858 43326273 -23341732 - LTR47B LTR ERVL 0 443 1 1141 249 70 45 chr20 43326273 43326300 -23341705 + L1ME LINE L1 1647 1672 -4408 2195 132 127 5 chr20 43326300 43326679 -23341326 + MSTA LTR MaLR 1 425 -3 1141 249 70 45 chr20 43326679 43327457 -23340548 + L1ME LINE L1 1672 2437 -3643 4982 157 7 10 chr20 43327460 43328324 -23339681 + L1 LINE L1 3 863 -4465 772 156 67 78 chr20 43328325 43328504 -23339501 + FRAM SINE Alu 1 176 0 7964 193 30 14 chr20 43328504 43330148 -23337857 + L1 LINE L1 3694 5372 -956 2372 105 0 13 chr20 43330148 43330461 -23337544 + AluSg SINE Alu 1 309 -1 7964 193 30 14 chr20 43330461 43330641 -23337364 + L1 LINE L1 5372 5548 -780 1771 173 35 3 chr20 43330641 43330924 -23337081 + AluJo SINE Alu 1 292 -20 4070 244 31 65 chr20 43330927 43331262 -23336743 + L1ME LINE L1 3172 3517 -2563 2317 118 3 6 chr20 43331262 43331575 -23336430 + AluSx SINE Alu 1 312 0 4070 244 31 65 chr20 43331575 43332076 -23335929 + L1ME LINE L1 3517 4034 -2046 2151 138 0 0 chr20 43332076 43332373 -23335632 - AluJo SINE Alu -14 298 2 4070 244 31 65 chr20 43332373 43333263 -23334742 + L1ME LINE L1 4034 4840 -1240 2189 118 7 3 chr20 43333263 43333559 -23334446 + AluSx SINE Alu 1 297 -15 455 139 23 0 chr20 43333559 43333645 -23334360 + GA-rich Low_complexity Low_complexity 1 88 0 373 257 12 105 chr20 43333649 43333910 -23334095 + L1ME LINE L1 4820 5121 -959 2286 96 23 3 chr20 43333910 43334212 -23333793 + AluSq SINE Alu 1 308 -5 373 257 12 105 chr20 43334212 43334290 -23333715 + L1ME LINE L1 5121 5205 -875 6200 202 29 11 chr20 43334347 43335956 -23332049 + L1M2c LINE L1 61 1537 -5312 1196 102 0 0 chr20 43335962 43336157 -23331848 - AluSg/x SINE Alu 0 320 126 244 219 0 0 chr20 43336159 43336223 -23331782 + L1M2c LINE L1 1523 1586 -5263 1127 166 0 0 chr20 43336347 43336510 -23331495 - FRAM SINE Alu -18 158 1 3030 124 35 4 chr20 43336510 43336995 -23331010 - L1PB2 LINE L1 0 6151 5652 2978 126 0 3 chr20 43337000 43337493 -23330512 + L1M2c LINE L1 1472 2061 -4788 225 0 0 0 chr20 43337493 43337518 -23330487 + (GGAA)n Simple_repeat Simple_repeat 3 27 0 2978 126 0 3 chr20 43337518 43337537 -23330468 + L1M2c LINE L1 2061 2079 -4770 519 155 29 35 chr20 43337569 43337743 -23330262 + GA-rich Low_complexity Low_complexity 4 176 0 613 186 11 28 chr20 43337766 43337943 -23330062 + GA-rich Low_complexity Low_complexity 2 175 0 3350 196 46 28 chr20 43337943 43337993 -23330012 + L1M2c LINE L1 2039 2087 -4761 1466 220 13 32 chr20 43337993 43338302 -23329703 + AluJb SINE Alu 1 303 -9 3350 196 46 28 chr20 43338302 43338676 -23329329 + L1M2c LINE L1 2087 2453 -4395 1938 149 6 37 chr20 43338676 43338998 -23329007 + AluJo SINE Alu 1 312 0 3350 196 46 28 chr20 43338998 43339554 -23328451 + L1M2c LINE L1 2453 2998 -3850 2650 98 5 19 chr20 43339554 43339922 -23328083 + THE1B LTR MaLR 2 364 0 3350 196 46 28 chr20 43339922 43340203 -23327802 + L1M2c LINE L1 2998 3272 -3576 2319 128 0 0 chr20 43340203 43340515 -23327490 + AluSx SINE Alu 1 312 0 3350 196 46 28 chr20 43340515 43340811 -23327194 + L1M2c LINE L1 3272 3624 -3224 955 166 0 0 chr20 43340813 43340952 -23327053 + AluJb SINE Alu 1 139 -173 526 181 0 0 chr20 43340953 43341036 -23326969 + AluSg/x SINE Alu 199 281 -31 3277 90 6 22 chr20 43341052 43341541 -23326464 + L1MA5A LINE L1 5814 6294 -3 1965 163 0 13 chr20 43342281 43342614 -23325391 - AluJb SINE Alu 0 312 1 2078 146 0 0 chr20 43342657 43342945 -23325060 + AluSx SINE Alu 1 288 -24 2996 216 51 30 chr20 43342957 43343509 -23324496 + L1ME2 LINE L1 5318 5894 -270 2664 61 0 3 chr20 43343509 43343822 -23324183 + AluSx SINE Alu 1 312 0 2996 216 51 30 chr20 43343822 43344089 -23323916 + L1ME2 LINE L1 5894 6154 -10 327 336 51 42 chr20 43344096 43344310 -23323695 + L1MC4 LINE L1 7801 8016 -26 432 287 16 88 chr20 43344312 43344655 -23323350 + L1MC4a LINE L1 5579 5769 -395 22 0 0 0 chr20 43344729 43344751 -23323254 + AT_rich Low_complexity Low_complexity 1 22 0 1388 161 12 21 chr20 43344898 43345141 -23322864 + AluJo SINE Alu 70 310 -2 308 176 73 0 chr20 43345200 43345268 -23322737 + L1ME4a LINE L1 5987 6059 -62 243 146 0 0 chr20 43345268 43345309 -23322696 + (GGGA)n Simple_repeat Simple_repeat 1 41 0 1452 177 0 0 chr20 43345378 43345615 -23322390 - AluJb SINE Alu -11 301 65 1137 286 216 23 chr20 43345640 43346349 -23321656 + L2 LINE L2 1940 2785 -529 687 163 0 0 chr20 43346355 43346478 -23321527 + GA-rich Low_complexity Low_complexity 4 126 0 2610 58 0 0 chr20 43346478 43346789 -23321216 + AluY SINE Alu 1 311 0 2236 97 10 3 chr20 43346795 43347094 -23320911 + AluSx SINE Alu 1 301 -11 1762 164 7 14 chr20 43347106 43347399 -23320606 - AluJb SINE Alu -21 291 1 2122 100 52 0 chr20 43347825 43348116 -23319889 - AluSp SINE Alu -7 306 1 997 172 12 0 chr20 43348123 43348286 -23319719 - FRAM SINE Alu -1 165 1 934 186 276 60 chr20 43348482 43348863 -23319142 - MER31B LTR ERV1 -3 463 1 1795 177 39 6 chr20 43349010 43349344 -23318661 + MER66B LTR ERV1 1 345 -141 495 90 0 0 chr20 43350071 43350149 -23317856 + (CA)n Simple_repeat Simple_repeat 2 79 0 438 243 243 12 chr20 43350151 43350320 -23317685 - MIR SINE MIR -27 235 28 244 123 70 0 chr20 43350360 43350417 -23317588 + CT-rich Low_complexity Low_complexity 2 62 0 740 164 0 25 chr20 43350417 43350539 -23317466 - AluJb SINE Alu -187 125 7 1329 182 88 0 chr20 43350550 43350846 -23317159 + Charlie4a DNA MER1_type 1 322 -186 436 149 0 0 chr20 43350867 43350941 -23317064 + MER63 DNA MER1_type 44 743 -93 427 237 10 10 chr20 43350934 43351031 -23316974 + MER63 DNA MER1_type 961 1057 -3 * 273 336 50 0 chr20 43351128 43351268 -23316737 - MIR SINE MIR -10 252 106 897 146 103 27 chr20 43351268 43351453 -23316552 + MER20 DNA MER1_type 20 218 -1 257 280 67 28 chr20 43351454 43351578 -23316427 - MIR SINE MIR -58 150 35 2284 135 3 0 chr20 43351620 43351931 -23316074 + AluSx SINE Alu 1 312 0 713 174 5 27 chr20 43351939 43352123 -23315882 + GA-rich Low_complexity Low_complexity 1 180 0 501 185 44 0 chr20 43352137 43352272 -23315733 + GA-rich Low_complexity Low_complexity 2 142 0 207 0 0 0 chr20 43352403 43352426 -23315579 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 806 310 73 32 chr20 43352535 43352953 -23315052 - L2 LINE L2 -2 3311 2871 1871 163 7 7 chr20 43352953 43353254 -23314751 + AluJo SINE Alu 1 301 -11 806 310 73 32 chr20 43353254 43353300 -23314705 - L2 LINE L2 -442 2871 2828 344 0 0 0 chr20 43353465 43353504 -23314501 - THE1B LTR MaLR 0 364 326 1108 75 0 0 chr20 43353505 43353638 -23314367 + AluSq/x SINE Alu 1 133 -179 2145 127 24 0 chr20 43353639 43353970 -23314035 - THE1B LTR MaLR -25 339 1 224 280 56 28 chr20 43354441 43354548 -23313457 - MIR SINE MIR -32 230 121 2065 143 3 0 chr20 43355338 43355638 -23312367 + AluSx SINE Alu 1 301 -11 233 330 10 29 chr20 43355858 43355961 -23312044 - MLT2E LTR ERVL -117 511 411 189 0 0 0 chr20 43356027 43356048 -23311957 + (A)n Simple_repeat Simple_repeat 1 21 0 1627 156 96 53 chr20 43356211 43356609 -23311396 + MER96B DNA MER1_type 1 415 -2 2115 107 0 24 chr20 43356685 43356997 -23311008 + AluSx SINE Alu 1 305 0 202 200 0 0 chr20 43357187 43357232 -23310773 + C-rich Low_complexity Low_complexity 4 48 0 1184 102 6 0 chr20 43357242 43357419 -23310586 + MER51A LTR ERV1 1 178 -456 1617 97 208 0 chr20 43357420 43357699 -23310306 + MER51A LTR ERV1 298 634 0 1155 243 38 10 chr20 43357699 43357987 -23310018 + LTR16C LTR ERVL 194 489 -2 442 264 120 24 chr20 43358580 43358747 -23309258 - MIR SINE MIR -75 187 5 219 294 35 47 chr20 43358754 43358839 -23309166 - L2 LINE L2 -1 3271 3188 2065 114 27 0 chr20 43358922 43359220 -23308785 - AluSx SINE Alu -2 310 5 621 197 57 0 chr20 43359245 43359367 -23308638 + MER58B DNA MER1_type 213 341 0 321 272 154 37 chr20 43359376 43359538 -23308467 - MIR SINE MIR -33 229 49 2189 120 0 3 chr20 43359624 43359924 -23308081 + AluY SINE Alu 7 305 -6 1618 157 75 4 chr20 43360305 43360461 -23307544 - AluJo SINE Alu -12 300 157 189 74 0 0 chr20 43360461 43360488 -23307517 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1618 157 75 4 chr20 43360488 43360611 -23307394 - AluJo SINE Alu -155 157 1 2443 107 0 0 chr20 43360622 43360932 -23307073 - AluSx SINE Alu -2 310 1 904 239 58 87 chr20 43361025 43361440 -23306565 + LTR16C LTR ERVL 81 483 -8 1939 148 20 13 chr20 43361616 43361742 -23306263 + AluJb SINE Alu 4 128 -184 2543 69 3 0 chr20 43361742 43362046 -23305959 + AluY SINE Alu 1 305 -6 1939 148 20 13 chr20 43362046 43362222 -23305783 + AluJb SINE Alu 128 308 -4 760 288 44 26 chr20 43362467 43362693 -23305312 - MIR SINE MIR 0 262 33 1195 231 62 3 chr20 43362707 43362806 -23305199 + MER7A DNA MER2_type 6 98 -2940 2332 164 72 36 chr20 43362806 43363069 -23304936 + MER66B LTR ERV1 1 290 -196 2182 130 0 0 chr20 43363069 43363368 -23304637 + AluSx SINE Alu 1 299 -13 2332 164 72 36 chr20 43363368 43363573 -23304432 + MER66B LTR ERV1 290 486 0 1195 231 62 3 chr20 43363573 43363797 -23304208 + MER7A DNA MER2_type 98 346 0 2013 102 25 7 chr20 43363996 43364270 -23303735 - AluSx SINE Alu -33 279 1 2366 99 0 3 chr20 43364338 43364641 -23303364 - AluSq SINE Alu -11 302 1 911 242 49 0 chr20 43364658 43364881 -23303124 - L1ME1 LINE L1 -3 6163 5930 2250 107 3 3 chr20 43365578 43365876 -23302129 - AluSq SINE Alu -14 299 2 630 183 0 131 chr20 43366020 43366057 -23301948 - FLAM_A SINE Alu -169 133 93 2280 111 0 3 chr20 43366057 43366355 -23301650 + AluSx SINE Alu 6 302 -10 630 183 0 131 chr20 43366355 43366470 -23301535 - FLAM_A SINE Alu -209 93 1 591 318 83 37 chr20 43366662 43366739 -23301266 + L3 LINE CR1 1116 1188 -389 1272 93 144 222 chr20 43366739 43366969 -23301036 - MSTA LTR MaLR 0 428 251 1100 114 11 0 chr20 43366969 43367144 -23300861 + (GGGA)n Simple_repeat Simple_repeat 4 180 0 1272 93 144 222 chr20 43367144 43367377 -23300628 - MSTA LTR MaLR -177 251 1 591 318 83 37 chr20 43367377 43367730 -23300275 + L3 LINE CR1 1188 1566 -11 1633 119 9 0 chr20 43367961 43368179 -23299826 + AluSg SINE Alu 24 243 -67 852 134 0 0 chr20 43368204 43368323 -23299682 + AluSc SINE Alu 181 299 -10 522 259 86 0 chr20 43368417 43368591 -23299414 - L1ME3A LINE L1 -1 6169 5981 452 220 34 0 chr20 43368612 43368727 -23299278 - L1ME3A LINE L1 -566 5603 5477 185 0 0 39 chr20 43368961 43368987 -23299018 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 766 193 89 0 chr20 43368989 43369124 -23298881 - FRAM SINE Alu -30 146 1 2228 109 0 31 chr20 43369146 43369468 -23298537 - AluSx SINE Alu 0 312 1 378 340 94 9 chr20 43369477 43369689 -23298316 - L2 LINE L2 -48 3265 3036 231 128 170 0 chr20 43369693 43369740 -23298265 - MSTD LTR MaLR -6 390 336 251 48 71 0 chr20 43369743 43369785 -23298220 - MSTD LTR MaLR -29 367 323 813 70 0 0 chr20 43369797 43369897 -23298108 - HY3 scRNA scRNA -1 100 1 821 187 35 40 chr20 43369937 43370135 -23297870 - MSTD LTR MaLR -199 197 1 274 333 105 18 chr20 43370141 43370255 -23297750 - L2 LINE L2 -289 3024 2901 1871 159 28 0 chr20 43370400 43370689 -23297316 + AluJb SINE Alu 1 297 -15 888 198 13 75 chr20 43370808 43371035 -23296970 - MER58A DNA MER1_type -2 222 10 281 275 55 18 chr20 43371261 43371370 -23296635 + L2 LINE L2 1975 2087 -1227 1507 183 33 11 chr20 43371390 43371538 -23296467 - AluJo SINE Alu -32 280 122 2156 110 24 0 chr20 43371538 43371830 -23296175 - AluSx SINE Alu -13 299 1 1507 183 33 11 chr20 43371830 43371955 -23296050 - AluJo SINE Alu -190 122 1 1573 60 75 21 chr20 43371997 43372254 -23295751 - LTR12 LTR ERV1 0 714 340 302 314 109 43 chr20 43372263 43372473 -23295532 + L1ME LINE L1 5375 5598 -572 1578 194 26 3 chr20 43372750 43373054 -23294951 - AluJo SINE Alu 0 312 2 188 237 132 13 chr20 43373146 43373222 -23294783 + L3 LINE CR1 1480 1564 -13 793 149 15 22 chr20 43373272 43373406 -23294599 + FLAM_C SINE Alu 1 133 0 1070 157 29 14 chr20 43373440 43373650 -23294355 - MER20 DNA MER1_type -6 213 1 1204 129 5 48 chr20 43373662 43373848 -23294157 - AluJo SINE Alu -129 183 6 918 156 0 0 chr20 43373859 43374000 -23294005 - FRAM SINE Alu -14 162 22 1800 104 4 4 chr20 43374196 43374437 -23293568 + AluSx SINE Alu 1 241 -71 1702 155 2 103 chr20 43374462 43374868 -23293137 - MLT1D LTR MaLR -137 368 4 1372 74 230 0 chr20 43374875 43375092 -23292913 + LTR12 LTR ERV1 3 269 -445 237 133 0 0 chr20 43375099 43375144 -23292861 + LTR30 LTR ERV1 544 588 -134 878 154 0 34 chr20 43375144 43375293 -23292712 - FRAM SINE Alu -16 160 17 496 263 153 22 chr20 43375494 43375722 -23292283 + L2 LINE L2 1981 2238 -1076 333 0 0 0 chr20 43379974 43380011 -23287994 + (T)n Simple_repeat Simple_repeat 1 37 0 215 238 189 25 chr20 43382410 43382532 -23285473 + MIR SINE MIR 91 232 -30 1871 135 3 14 chr20 43383171 43383460 -23284545 + AluSx SINE Alu 5 290 -22 712 222 143 4 chr20 43383466 43383718 -23284287 - L1MC4 LINE L1 -202 7840 7554 349 235 151 8 chr20 43383802 43383921 -23284084 + L1MC4 LINE L1 7408 7543 -499 1847 131 3 3 chr20 43383938 43384221 -23283784 - AluSp SINE Alu -30 283 1 563 194 284 0 chr20 43384296 43384430 -23283575 - FAM SINE Alu -3 172 1 1589 157 57 0 chr20 43384756 43385037 -23282968 + AluSx SINE Alu 3 299 -13 250 160 173 27 chr20 43385280 43385355 -23282650 - L1MC5 LINE L1 -164 7797 7712 601 216 117 18 chr20 43385363 43385534 -23282471 - L1MC5 LINE L1 -444 7517 7330 351 0 0 0 chr20 43385541 43385580 -23282425 + (TG)n Simple_repeat Simple_repeat 1 39 0 1427 139 73 8 chr20 43385581 43385840 -23282165 - AluJb SINE Alu -35 277 2 353 219 76 19 chr20 43385847 43385860 -23282145 + MER5A DNA MER1_type 3 14 -175 1591 141 83 0 chr20 43385860 43386137 -23281868 + AluJo SINE Alu 6 305 -7 353 219 76 19 chr20 43386137 43386228 -23281777 + MER5A DNA MER1_type 14 113 -76 1997 95 62 144 chr20 43386232 43386684 -23281321 + L1MA2 LINE L1 5884 6298 -6 253 91 0 23 chr20 43386684 43386728 -23281277 - Alu SINE Alu -4 298 256 353 280 11 21 chr20 43386749 43386764 -23281241 + MER5A DNA MER1_type 97 111 -78 1836 125 30 10 chr20 43386764 43387060 -23280945 + AluSx SINE Alu 1 302 -10 353 280 11 21 chr20 43387060 43387137 -23280868 + MER5A DNA MER1_type 111 188 -1 420 147 40 0 chr20 43387182 43387257 -23280748 - L1PB4 LINE L1 -20 6136 6059 1818 139 10 7 chr20 43387287 43387590 -23280415 + AluJb SINE Alu 1 304 -8 410 181 133 67 chr20 43387601 43387706 -23280299 + FLAM_C SINE Alu 4 115 -28 235 208 0 0 chr20 43387714 43387767 -23280238 - L1MC5 LINE L1 -722 7239 7187 1935 156 0 0 chr20 43387826 43388128 -23279877 - AluJb SINE Alu -10 302 1 967 202 81 8 chr20 43388148 43388417 -23279588 - L1MC5 LINE L1 -1041 6954 6619 321 312 52 56 chr20 43388468 43388583 -23279422 - L3 LINE CR1 -348 1229 1115 2441 56 0 7 chr20 43388583 43388886 -23279119 - AluY SINE Alu -9 302 2 321 312 52 56 chr20 43388886 43389001 -23279004 - L3 LINE CR1 -462 1115 1000 2093 113 0 0 chr20 43389435 43389735 -23278270 + AluSx SINE Alu 1 300 -12 1211 149 145 158 chr20 43389859 43390312 -23277693 + MLT1D LTR MaLR 3 449 -56 306 89 0 0 chr20 43390312 43390357 -23277648 + MADE1 DNA Mariner 1 45 -35 2309 67 3 0 chr20 43390366 43390666 -23277339 + AluY SINE Alu 1 301 -10 247 214 0 18 chr20 43390667 43390723 -23277282 + MLT1D LTR MaLR 413 467 0 315 233 79 72 chr20 43390727 43390989 -23277016 + MLT1H LTR MaLR 190 548 -1 299 215 118 21 chr20 43391014 43391107 -23276898 - MIR SINE MIR -79 183 82 476 263 156 49 chr20 43391160 43391577 -23276428 + LTR33 LTR ERVL 8 512 -9 892 66 0 0 chr20 43391649 43391755 -23276250 + U6 snRNA snRNA 1 106 -1 25 0 0 0 chr20 43391755 43391780 -23276225 + AT_rich Low_complexity Low_complexity 1 25 0 1953 88 22 4 chr20 43391780 43392053 -23275952 - LTR35 LTR ERV1 -191 427 150 995 141 32 0 chr20 43392073 43392229 -23275776 + AluJo SINE Alu 6 166 -146 895 153 54 64 chr20 43392236 43392319 -23275686 - LTR54 LTR ERV1 -309 201 119 2223 100 0 10 chr20 43392319 43392629 -23275376 + AluSq SINE Alu 1 307 -6 895 153 54 64 chr20 43392629 43392748 -23275257 - LTR54 LTR ERV1 -391 119 1 266 253 40 10 chr20 43392749 43392804 -23275201 + GA-rich Low_complexity Low_complexity 3 64 -40 903 99 23 15 chr20 43392804 43392935 -23275070 + FLAM_C SINE Alu 1 132 -1 266 253 40 10 chr20 43392935 43392978 -23275027 + GA-rich Low_complexity Low_complexity 64 104 0 1538 158 153 14 chr20 43393029 43393395 -23274610 - MER31B LTR ERV1 -15 451 35 718 210 0 29 chr20 43393450 43393588 -23274417 - AluJo SINE Alu -178 134 1 1972 123 20 0 chr20 43393670 43393970 -23274035 + AluSg SINE Alu 1 306 -4 1151 135 22 0 chr20 43394190 43394375 -23273630 + AluSg/x SINE Alu 110 298 -12 23 0 0 0 chr20 43394440 43394463 -23273542 + AT_rich Low_complexity Low_complexity 1 23 0 956 176 0 41 chr20 43394467 43394637 -23273368 + FRAM SINE Alu 4 166 0 4454 142 54 26 chr20 43394650 43395199 -23272806 - MER6 DNA MER2_type -83 782 205 204 40 0 0 chr20 43395199 43395224 -23272781 + (CA)n Simple_repeat Simple_repeat 1 25 0 4454 142 54 26 chr20 43395224 43395435 -23272570 - MER6 DNA MER2_type -660 205 1 1345 165 121 18 chr20 43395960 43396232 -23271773 - AluJb SINE Alu -12 300 1 2393 155 34 0 chr20 43396244 43396632 -23271373 - MER57A LTR ERV1 -2 401 1 639 148 148 16 chr20 43396633 43396755 -23271250 - MER57A-int LTR ERV1 -1 7536 7399 529 170 82 81 chr20 43396774 43396997 -23271008 - LTR54B LTR ERV1 -271 239 3 3185 165 19 110 chr20 43396997 43397437 -23270568 - MER57A-int LTR ERV1 -391 7146 6667 300 132 0 53 chr20 43397437 43397513 -23270492 + L1PA6 LINE L1 6080 6151 -3 3185 165 19 110 chr20 43397513 43397665 -23270340 - MER57A-int LTR ERV1 -870 6667 6641 1593 149 45 15 chr20 43397665 43397933 -23270072 - AluJo SINE Alu -23 289 14 3185 165 19 110 chr20 43397933 43398127 -23269878 - MER57A-int LTR ERV1 -896 6641 6431 3583 139 2 6 chr20 43398143 43398677 -23269328 - MER50 LTR ERV1 -130 604 73 3430 182 22 18 chr20 43398803 43399428 -23268577 - MER57A-int LTR ERV1 -1085 6452 5825 1885 152 0 16 chr20 43399446 43399761 -23268244 + AluJb SINE Alu 1 310 -2 240 111 0 0 chr20 43399768 43399804 -23268201 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 4705 154 19 82 chr20 43400123 43400904 -23267101 - MER57A-int LTR ERV1 -1716 5821 4992 1583 160 59 10 chr20 43400904 43401192 -23266813 - AluJb SINE Alu -5 307 6 4705 154 19 82 chr20 43401192 43401371 -23266634 - MER57A-int LTR ERV1 -2545 4992 4931 225 0 0 0 chr20 43401371 43401396 -23266609 + (CA)n Simple_repeat Simple_repeat 2 26 0 4705 154 19 82 chr20 43401396 43401488 -23266517 - MER57A-int LTR ERV1 -2606 4931 4835 624 176 66 29 chr20 43401490 43401626 -23266379 - FLAM_C SINE Alu -1 142 2 1508 163 78 96 chr20 43401627 43402075 -23265930 - MER57A-int LTR ERV1 -2039 4292 3851 1702 187 3 0 chr20 43402075 43402369 -23265636 + AluJb SINE Alu 1 295 -17 847 167 0 0 chr20 43402426 43402564 -23265441 - AluJo SINE Alu -174 138 1 410 208 68 39 chr20 43402568 43402775 -23265230 - MER57A-int LTR ERV1 -3015 1921 1709 465 245 0 0 chr20 43402898 43403000 -23265005 - MER57A-int LTR ERV1 -2885 3446 3345 1275 160 15 45 chr20 43403052 43403321 -23264684 - MER57A-int LTR ERV1 -2990 3341 3081 1706 161 3 11 chr20 43403423 43403738 -23264267 + AluJb SINE Alu 1 313 0 316 271 42 0 chr20 43403738 43403834 -23264171 - MER57A-int LTR ERV1 -3681 1190 1091 1969 125 7 0 chr20 43403835 43404146 -23263859 + AluSq SINE Alu 1 313 0 583 258 143 29 chr20 43404169 43404413 -23263592 - MER34C LTR ERV1 -155 430 159 350 254 0 27 chr20 43404415 43404525 -23263480 - MER57A-int LTR ERV1 -4133 990 884 195 42 0 0 chr20 43404553 43404577 -23263428 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 881 125 0 22 chr20 43404695 43404831 -23263174 - FLAM_C SINE Alu 0 133 1 2264 112 85 15 chr20 43404896 43405236 -23262769 - THE1B LTR MaLR 0 364 1 12248 84 8 0 chr20 43405236 43406804 -23261201 - THE1B-int LTR MaLR 0 1580 1 2308 111 73 14 chr20 43406804 43407148 -23260857 - THE1B LTR MaLR 0 364 1 27 29 0 0 chr20 43407172 43407206 -23260799 + AT_rich Low_complexity Low_complexity 1 34 0 1626 144 8 4 chr20 43407223 43407479 -23260526 - AluSx SINE Alu -36 276 20 625 114 74 126 chr20 43407489 43407623 -23260382 - MER57A-int LTR ERV1 -6734 803 679 2407 69 3 0 chr20 43407623 43407929 -23260076 - AluY SINE Alu -4 307 1 625 114 74 126 chr20 43407929 43407969 -23260036 - MER57A-int LTR ERV1 -6858 679 638 971 186 6 0 chr20 43407969 43408141 -23259864 - LTR1B LTR ERV1 0 826 654 1055 249 20 10 chr20 43408153 43408447 -23259558 - MER57A-int LTR ERV1 -7146 391 3 1904 127 64 105 chr20 43408485 43408578 -23259427 - MER57A LTR ERV1 -1 402 307 750 118 118 0 chr20 43408578 43408697 -23259308 + FLAM_C SINE Alu 1 133 0 1904 127 64 105 chr20 43408697 43409022 -23258983 - MER57A LTR ERV1 -96 307 1 2098 123 7 0 chr20 43409076 43409384 -23258621 - AluSx SINE Alu 0 312 3 1485 204 130 25 chr20 43409645 43410049 -23257956 + LTR54B LTR ERV1 1 361 -137 2481 56 0 0 chr20 43410049 43410351 -23257654 - AluY SINE Alu -9 302 1 1932 140 10 0 chr20 43410353 43410646 -23257359 - AluSx SINE Alu -16 296 1 1485 204 130 25 chr20 43410646 43410685 -23257320 + LTR54B LTR ERV1 361 494 -4 1747 210 18 15 chr20 43410712 43411103 -23256902 + MER90 LTR ERV1 70 461 -153 1951 111 7 7 chr20 43411113 43411433 -23256572 - AluSq SINE Alu 0 313 1 274 265 117 48 chr20 43411662 43411840 -23256165 + MIR SINE MIR 16 217 -45 1615 199 7 0 chr20 43411951 43412253 -23255752 + AluJo SINE Alu 5 308 -4 4119 67 13 9 chr20 43412755 43412897 -23255108 - MER41A LTR ERV1 0 554 414 2236 97 7 0 chr20 43412897 43413207 -23254798 + AluSx SINE Alu 1 312 0 4119 67 13 9 chr20 43413207 43413603 -23254402 - MER41A LTR ERV1 -140 414 14 2348 172 33 79 chr20 43413920 43414501 -23253504 - MLT2B3 LTR ERVL 0 554 1 2072 189 30 84 chr20 43414521 43414985 -23253020 + MLT1D LTR MaLR 1 434 -71 2332 83 0 0 chr20 43414985 43415286 -23252719 + AluY SINE Alu 1 301 -10 2072 189 30 84 chr20 43415286 43415355 -23252650 + MLT1D LTR MaLR 434 505 0 490 141 0 54 chr20 43415608 43415700 -23252305 - L1MC3 LINE L1 -566 7219 7133 813 214 58 0 chr20 43415700 43415873 -23252132 + MSTD LTR MaLR 1 183 -213 819 182 18 73 chr20 43415903 43416033 -23251972 + FAM SINE Alu 1 8 -177 1928 110 23 33 chr20 43416033 43416334 -23251671 - AluSx SINE Alu -14 298 1 819 182 18 73 chr20 43416334 43416368 -23251637 + FAM SINE Alu 8 42 -7 1043 163 47 11 chr20 43416384 43416574 -23251431 + MSTD LTR MaLR 200 396 0 1173 171 82 14 chr20 43416575 43416868 -23251137 - L1MC3 LINE L1 -649 7136 6824 2225 205 118 74 chr20 43416870 43416948 -23251057 - L1MEc LINE L1 -5320 1076 1003 1977 119 17 7 chr20 43416948 43417241 -23250764 - AluSx SINE Alu -16 296 1 2276 85 0 0 chr20 43417250 43417543 -23250462 + AluY SINE Alu 1 293 -18 2225 205 118 74 chr20 43417543 43417700 -23250305 - L1MEc LINE L1 -5400 996 847 1296 152 127 69 chr20 43417700 43417833 -23250172 - AluJo SINE Alu -9 293 169 369 0 0 0 chr20 43417833 43417874 -23250131 + (TTA)n Simple_repeat Simple_repeat 2 42 0 1738 148 4 4 chr20 43417879 43418157 -23249848 - AluJb SINE Alu -34 278 1 1296 152 127 69 chr20 43418157 43418293 -23249712 - AluJo SINE Alu -136 166 2 2225 205 118 74 chr20 43418293 43418831 -23249174 - L1MEc LINE L1 -5549 847 257 21 0 0 0 chr20 43418918 43418939 -23249066 + AT_rich Low_complexity Low_complexity 1 21 0 2143 98 3 0 chr20 43418949 43419236 -23248769 + AluSg SINE Alu 1 288 -22 877 191 11 21 chr20 43419241 43419402 -23248603 + AluJo SINE Alu 118 279 -33 2212 103 17 98 chr20 43419402 43419567 -23248438 + THE1C LTR MaLR 1 178 -197 2405 59 3 3 chr20 43419567 43419871 -23248134 - AluY SINE Alu -7 304 1 2212 103 17 98 chr20 43419871 43420061 -23247944 + THE1C LTR MaLR 178 321 -54 2134 122 0 0 chr20 43420061 43420364 -23247641 + AluSg SINE Alu 2 304 -6 2212 103 17 98 chr20 43420364 43420415 -23247590 + THE1C LTR MaLR 321 375 0 877 191 11 21 chr20 43420415 43420441 -23247564 + AluJo SINE Alu 279 303 -9 458 246 24 8 chr20 43420443 43420569 -23247436 - L1MEc LINE L1 -6232 164 37 2032 121 0 0 chr20 43420586 43420876 -23247129 - AluSg SINE Alu -20 290 1 448 161 102 0 chr20 43421013 43421125 -23246880 - L1M2 LINE L1 -585 5586 5457 827 173 0 0 chr20 43421140 43421273 -23246732 - FLAM_C SINE Alu 0 133 1 372 319 14 14 chr20 43421273 43421414 -23246591 - L1MEd LINE L1 -5290 829 689 622 281 68 74 chr20 43421647 43421750 -23246255 - L1MEd LINE L1 -5683 436 334 1672 156 56 0 chr20 43421750 43422038 -23245967 - AluJo SINE Alu -8 304 1 622 281 68 74 chr20 43422038 43422272 -23245733 - L1MEd LINE L1 -5785 334 101 2246 85 0 3 chr20 43422273 43422567 -23245438 - AluY SINE Alu -18 293 1 826 128 0 0 chr20 43422666 43422783 -23245222 + FLAM_C SINE Alu 2 118 -15 1603 170 13 39 chr20 43422987 43423198 -23244807 - AluJo SINE Alu -7 305 103 3877 170 60 34 chr20 43423198 43423963 -23244042 + LTR1 LTR ERV1 1 785 0 1603 170 13 39 chr20 43423963 43424063 -23243942 - AluJo SINE Alu -209 103 2 1718 140 0 31 chr20 43424425 43424718 -23243287 - AluJo SINE Alu -17 295 12 438 233 107 0 chr20 43425373 43425476 -23242529 - L2 LINE L2 0 3313 3200 326 194 104 0 chr20 43427241 43427308 -23240697 - L2 LINE L2 -3 3269 3196 1049 246 98 21 chr20 43427308 43427645 -23240360 - LTR16A LTR ERVL 0 450 88 484 233 16 152 chr20 43427645 43427881 -23240124 + L2 LINE L2 2000 2182 -1132 1847 153 0 7 chr20 43427881 43428163 -23239842 - AluJb SINE Alu -32 280 1 484 233 16 152 chr20 43428163 43428248 -23239757 + L2 LINE L2 2182 2277 -1037 288 215 177 20 chr20 43428230 43428331 -23239674 + L2 LINE L2 3172 3287 -26 * 181 0 0 0 chr20 43428498 43428518 -23239487 + (TTTA)n Simple_repeat Simple_repeat 3 116 0 1974 121 37 4 chr20 43428518 43428791 -23239214 - AluSx SINE Alu -30 282 1 1115 97 0 7 chr20 43428792 43428936 -23239069 - AluJb SINE Alu -169 143 1 2241 118 0 37 chr20 43429031 43429353 -23238652 - AluSx SINE Alu -2 310 1 1938 161 3 20 chr20 43429355 43429659 -23238346 - AluJo SINE Alu -13 299 1 1166 99 0 50 chr20 43429668 43429849 -23238156 - AluSg/x SINE Alu 0 310 139 1241 252 84 35 chr20 43429899 43430136 -23237869 - L2 LINE L2 -13 3300 3076 2298 100 3 0 chr20 43430136 43430437 -23237568 + AluSx SINE Alu 1 302 -10 1241 252 84 35 chr20 43430437 43430949 -23237056 - L2 LINE L2 -237 3076 2512 1116 122 14 72 chr20 43430970 43431013 -23236992 - MER3 DNA MER1_type 0 209 165 727 186 0 0 chr20 43431013 43431142 -23236863 - FLAM_A SINE Alu 0 133 5 1116 122 14 72 chr20 43431142 43431320 -23236685 - MER3 DNA MER1_type -44 165 1 22 35 0 0 chr20 43432664 43432693 -23235312 + GC_rich Low_complexity Low_complexity 1 29 0 1736 152 3 58 chr20 43435403 43435733 -23232272 - AluJo SINE Alu 0 312 1 2064 133 17 0 chr20 43435736 43436030 -23231975 - AluSx SINE Alu -13 299 1 728 228 74 0 chr20 43436040 43436202 -23231803 - FAM SINE Alu 0 175 2 330 304 11 0 chr20 43436206 43436298 -23231707 + L2 LINE L2 3180 3272 0 738 151 34 0 chr20 43437221 43437340 -23230665 - Tigger7 DNA MER2_type -1 2490 2368 2150 102 3 62 chr20 43437363 43437688 -23230317 + AluSg SINE Alu 1 306 -4 1983 136 0 0 chr20 43437712 43437991 -23230014 + AluJb SINE Alu 22 300 -12 2360 92 3 0 chr20 43437991 43438285 -23229720 + AluSp SINE Alu 1 295 -18 821 216 7 0 chr20 43438285 43438424 -23229581 - FAM SINE Alu -28 157 18 256 196 72 31 chr20 43438430 43438527 -23229478 - L1M4 LINE L1 -940 5206 5106 4400 141 65 11 chr20 43438552 43439377 -23228628 - L1MB8 LINE L1 -1 6177 5308 798 188 0 0 chr20 43440355 43440488 -23227517 - FLAM_A SINE Alu 0 133 1 2307 91 0 3 chr20 43440711 43440998 -23227007 + AluSc SINE Alu 1 286 -23 2015 160 3 3 chr20 43441096 43441408 -23226597 - AluSx SINE Alu 0 312 1 180 0 0 0 chr20 43441417 43441437 -23226568 + (T)n Simple_repeat Simple_repeat 1 20 0 2162 122 6 19 chr20 43441457 43441769 -23226236 + AluSx SINE Alu 1 308 -4 513 161 0 85 chr20 43442348 43442388 -23225617 - FLAM_C SINE Alu -169 143 101 2104 84 8 4 chr20 43442388 43442651 -23225354 + AluSx SINE Alu 41 304 -8 513 161 0 85 chr20 43442651 43442728 -23225277 - FLAM_C SINE Alu -211 101 36 323 228 63 79 chr20 43442797 43442986 -23225019 - L1M4 LINE L1 -3028 3118 2933 409 313 62 14 chr20 43442986 43443130 -23224875 - L2 LINE L2 -8 3264 3114 261 83 0 0 chr20 43443234 43443270 -23224735 + (TCCA)n Simple_repeat Simple_repeat 2 37 0 231 328 15 0 chr20 43443276 43443343 -23224662 - L2 LINE L2 -6 3307 3240 184 361 0 10 chr20 43443341 43443438 -23224567 - L2 LINE L2 -253 3019 2924 * 384 322 125 33 chr20 43443606 43443910 -23224095 - L2 LINE L2 -650 2664 2333 521 239 23 124 chr20 43443992 43444210 -23223795 - MER91A DNA MER1_type 0 196 1 195 337 11 34 chr20 43444380 43444469 -23223536 + MIR SINE MIR 126 212 -50 2024 126 44 0 chr20 43445314 43445608 -23222397 + AluSx SINE Alu 1 307 -5 223 296 148 0 chr20 43445810 43445891 -23222114 - MIR SINE MIR -58 204 112 232 246 0 29 chr20 43446177 43446246 -23221759 + (TG)n Simple_repeat Simple_repeat 1 67 0 1243 125 0 0 chr20 43446355 43446523 -23221482 - AluSg/x SINE Alu -11 301 134 2488 98 0 0 chr20 43446523 43446829 -23221176 - AluSx SINE Alu -6 306 1 458 322 95 23 chr20 43448260 43448608 -23219397 - L2 LINE L2 -79 3193 2821 2276 108 0 7 chr20 43450068 43450364 -23217641 + AluSq SINE Alu 1 294 -19 1889 145 3 30 chr20 43450382 43450685 -23217320 + AluJo SINE Alu 1 295 -17 234 355 65 0 chr20 43450827 43450920 -23217085 + MIR SINE MIR 14 112 -150 314 276 60 26 chr20 43453128 43453244 -23214761 + MIR SINE MIR 34 153 -109 368 260 19 10 chr20 43455391 43455495 -23212510 + MIR SINE MIR 31 135 -127 610 289 57 9 chr20 43455552 43455763 -23212242 - MIR SINE MIR -7 255 35 2173 140 10 49 chr20 43455835 43456241 -23211764 - MLT1B LTR MaLR 0 390 1 207 216 95 54 chr20 43456290 43456364 -23211641 + L2 LINE L2 3193 3269 -3 626 230 137 25 chr20 43456467 43456671 -23211334 + MIR SINE MIR 2 228 -34 362 274 132 74 chr20 43459905 43460095 -23207910 + MIR SINE MIR 20 220 -42 719 205 84 25 chr20 43460097 43460416 -23207589 - Tigger3(Golem) DNA MER2_type -1 3028 1 2253 120 3 0 chr20 43460565 43460864 -23207141 + AluSx SINE Alu 1 300 -12 191 391 58 16 chr20 43460900 43461089 -23206916 - L3 LINE CR1 -361 1216 1020 278 300 42 0 chr20 43461096 43461216 -23206789 - L1ME2 LINE L1 -2 6162 6038 210 71 0 0 chr20 43461248 43461276 -23206729 + (A)n Simple_repeat Simple_repeat 1 28 0 1232 185 89 17 chr20 43461276 43461578 -23206427 - L1ME2 LINE L1 -109 6055 5732 1102 295 146 23 chr20 43461583 43462057 -23205948 - L3 LINE CR1 -554 1023 492 303 291 79 8 chr20 43462519 43462646 -23205359 - L2 LINE L2 -4 3268 3133 2104 125 10 6 chr20 43463320 43463631 -23204374 + AluSx SINE Alu 1 312 0 1665 133 4 0 chr20 43463783 43464017 -23203988 + AluSx SINE Alu 64 298 -14 750 250 20 10 chr20 43464999 43465199 -23202806 + MIR SINE MIR 51 252 -10 1058 264 84 38 chr20 43465359 43465739 -23202266 - L1MC5 LINE L1 -100 7861 7447 2775 23 0 0 chr20 43465739 43466040 -23201965 - AluY SINE Alu -10 301 1 1058 264 84 38 chr20 43466040 43466193 -23201812 - L1MC5 LINE L1 -514 7447 7303 194 98 49 0 chr20 43466195 43466236 -23201769 + (TCTCTG)n Simple_repeat Simple_repeat 3 45 0 341 308 24 24 chr20 43466516 43466734 -23201271 + CT-rich Low_complexity Low_complexity 1 218 0 318 50 0 0 chr20 43468351 43468391 -23199614 + (TG)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr20 43469861 43469882 -23198123 + AT_rich Low_complexity Low_complexity 1 21 0 1461 158 31 46 chr20 43469883 43470143 -23197862 + AluJo SINE Alu 1 256 -56 225 373 55 0 chr20 43470255 43470365 -23197640 + L2 LINE L2 1009 1124 -2190 317 354 70 28 chr20 43470518 43470733 -23197272 + L2 LINE L2 1330 1553 -1761 737 219 13 29 chr20 43470754 43470887 -23197118 + HAL1 LINE L1 1033 1162 -1345 2440 103 0 0 chr20 43470887 43471197 -23196808 + AluSg SINE Alu 1 310 0 737 219 13 29 chr20 43471197 43471301 -23196704 + HAL1 LINE L1 1162 1266 -1241 * 3614 193 60 82 chr20 43471296 43471634 -23196371 + L1MB4 LINE L1 4419 4763 -1417 355 152 45 0 chr20 43471634 43471700 -23196305 - AluSp/q SINE Alu 0 303 235 3614 193 60 82 chr20 43471700 43471796 -23196209 + L1MB4 LINE L1 4763 4860 -1320 2666 50 0 0 chr20 43471796 43472096 -23195909 - AluY SINE Alu -11 300 1 3614 193 60 82 chr20 43472096 43472402 -23195603 + L1MB4 LINE L1 4860 5171 -1009 2397 75 3 3 chr20 43472402 43472695 -23195310 + AluSc SINE Alu 1 293 -16 3614 193 60 82 chr20 43472695 43473435 -23194570 + L1MB4 LINE L1 5171 5907 -273 2380 93 0 10 chr20 43473435 43473748 -23194257 + AluSg SINE Alu 1 310 0 3614 193 60 82 chr20 43473748 43474014 -23193991 + L1MB4 LINE L1 5907 6177 -3 271 273 67 83 chr20 43474024 43474098 -23193907 + HAL1 LINE L1 1737 1811 -696 1931 110 36 7 chr20 43474098 43474379 -23193626 + AluSx SINE Alu 10 298 -14 271 273 67 83 chr20 43474379 43474557 -23193448 + HAL1 LINE L1 1811 1985 -522 345 226 117 68 chr20 43474565 43474813 -23193192 + HAL1 LINE L1 2119 2378 -129 263 352 9 33 chr20 43475404 43475614 -23192391 + L1MC/D LINE L1 5615 5819 -1989 2435 91 0 0 chr20 43475757 43476054 -23191951 - AluY SINE Alu -14 297 1 2534 67 3 0 chr20 43476610 43476909 -23191096 + AluY SINE Alu 1 300 -11 189 313 50 10 chr20 43477276 43477375 -23190630 - L2 LINE L2 -194 3078 2976 * 273 274 35 53 chr20 43477361 43477474 -23190531 - MIR3 SINE MIR -22 186 76 235 162 0 59 chr20 43477895 43477963 -23190042 + CT-rich Low_complexity Low_complexity 1 64 0 584 277 57 0 chr20 43478091 43478250 -23189755 + MIR SINE MIR 25 192 -70 507 274 63 79 chr20 43478818 43478853 -23189152 - L1ME4a LINE L1 -53 6068 6034 2438 94 0 0 chr20 43478853 43479152 -23188853 + AluSx SINE Alu 1 299 -13 507 274 63 79 chr20 43479152 43479419 -23188586 - L1ME4a LINE L1 -87 6034 5771 2977 275 86 41 chr20 43479429 43479650 -23188355 - L2 LINE L2 0 3313 3103 417 185 206 0 chr20 43479650 43479742 -23188263 - MER81 DNA DNA -1 113 3 2977 275 86 41 chr20 43479742 43480023 -23187982 - L2 LINE L2 -210 3103 2836 2533 73 3 0 chr20 43480023 43480323 -23187682 - AluSc SINE Alu -8 301 1 2977 275 86 41 chr20 43480323 43480768 -23187237 - L2 LINE L2 -477 2836 2412 2036 147 0 13 chr20 43480768 43481081 -23186924 + AluJb SINE Alu 1 309 -3 2977 275 86 41 chr20 43481081 43481095 -23186910 - L2 LINE L2 -901 2412 2400 2283 109 3 0 chr20 43481095 43481398 -23186607 + AluSx SINE Alu 1 304 -8 2977 275 86 41 chr20 43481398 43481487 -23186518 - L2 LINE L2 -913 2400 2316 2392 105 0 9 chr20 43481487 43481802 -23186203 + AluSx SINE Alu 1 312 0 2977 275 86 41 chr20 43481802 43482272 -23185733 - L2 LINE L2 -997 2316 1712 195 222 0 0 chr20 43483106 43483151 -23184854 + (CACG)n Simple_repeat Simple_repeat 3 47 0 464 275 11 6 chr20 43483243 43483421 -23184584 + (CA)n Simple_repeat Simple_repeat 2 180 0 307 290 116 32 chr20 43484637 43484792 -23183213 + MIR3 SINE MIR 34 201 -7 343 269 134 0 chr20 43485368 43485502 -23182503 + MIR SINE MIR 41 192 -70 195 42 0 0 chr20 43485532 43485556 -23182449 + (GGGA)n Simple_repeat Simple_repeat 3 26 0 182 329 24 12 chr20 43486889 43486974 -23181031 + MIR3 SINE MIR 93 178 -30 738 164 0 0 chr20 43486991 43487101 -23180904 - FRAM SINE Alu -56 120 11 1958 133 42 0 chr20 43487121 43487407 -23180598 - AluSx SINE Alu -14 298 1 183 327 84 0 chr20 43487566 43487673 -23180332 - L2 LINE L2 -222 3050 2935 199 349 12 0 chr20 43487829 43487912 -23180093 - L2 LINE L2 -509 2805 2722 480 291 28 21 chr20 43488252 43488393 -23179612 - MIR3 SINE MIR -46 162 21 612 294 77 23 chr20 43488832 43489053 -23178952 + MIR SINE MIR 20 252 -10 366 23 0 0 chr20 43489701 43489744 -23178261 + (TG)n Simple_repeat Simple_repeat 1 43 0 278 352 14 14 chr20 43489775 43489920 -23178085 + (TATATG)n Simple_repeat Simple_repeat 2 146 0 727 287 84 30 chr20 43489959 43490255 -23177750 - LTR16A LTR ERVL 0 450 139 1415 162 18 49 chr20 43490995 43491030 -23176975 - MER33 DNA MER1_type -2261 324 289 2434 97 0 3 chr20 43491030 43491338 -23176667 + AluSq SINE Alu 1 307 -6 1415 162 18 49 chr20 43491338 43491630 -23176375 - MER33 DNA MER1_type -2296 289 7 2482 82 0 0 chr20 43491843 43492146 -23175859 + AluSq SINE Alu 1 303 -10 225 320 125 31 chr20 43492627 43492755 -23175250 - MIR SINE MIR -41 221 82 223 246 77 0 chr20 43493102 43493167 -23174838 - MER91A DNA MER1_type 0 196 127 378 299 48 90 chr20 43493168 43493335 -23174670 - MER91A DNA MER1_type -36 160 1 199 324 0 0 chr20 43493346 43493414 -23174591 + L2 LINE L2 3200 3267 -5 186 259 19 19 chr20 43493458 43493512 -23174493 - MIR3 SINE MIR -44 164 111 2147 129 0 7 chr20 43493817 43494120 -23173885 + AluSx SINE Alu 1 301 -11 184 289 0 0 chr20 43494195 43494240 -23173765 - MIR SINE MIR -113 149 105 947 262 84 46 chr20 43495186 43495295 -23172710 - L2 LINE L2 -1 3312 3209 2144 122 3 7 chr20 43495295 43495598 -23172407 + AluSq SINE Alu 1 302 -11 947 262 84 46 chr20 43495598 43495858 -23172147 - L2 LINE L2 -104 3209 2929 354 259 0 0 chr20 43495889 43495974 -23172031 - L2 LINE L2 -568 2746 2662 2430 86 3 0 chr20 43495984 43496285 -23171720 - AluSc SINE Alu -7 302 1 2301 101 0 3 chr20 43496285 43496581 -23171424 - AluSx SINE Alu -17 295 1 790 218 63 91 chr20 43496811 43496839 -23171166 + MIR SINE MIR 7 34 -228 2112 125 0 14 chr20 43496839 43497136 -23170869 + AluSx SINE Alu 1 293 -19 790 218 63 91 chr20 43497136 43497359 -23170646 + MIR SINE MIR 34 251 -11 2323 109 7 0 chr20 43497648 43497952 -23170053 - AluSx SINE Alu -6 306 1 290 290 50 10 chr20 43498299 43498399 -23169606 + L2 LINE L2 3210 3313 0 348 260 93 27 chr20 43498713 43498863 -23169142 - MIR3 SINE MIR -2 206 47 559 271 65 85 chr20 43499028 43499082 -23168923 - L1ME4a LINE L1 -2 6119 6065 2150 148 0 0 chr20 43499082 43499385 -23168620 + AluSx SINE Alu 1 303 -9 559 271 65 85 chr20 43499385 43499493 -23168512 - L1ME4a LINE L1 -56 6065 5956 2461 64 0 0 chr20 43499493 43499811 -23168194 - AluY SINE Alu 0 318 1 559 271 65 85 chr20 43499811 43500177 -23167828 - L1ME4a LINE L1 -165 5956 5605 2019 118 83 0 chr20 43500177 43500465 -23167540 - AluSx SINE Alu 0 312 1 559 271 65 85 chr20 43500465 43500674 -23167331 - L1ME4a LINE L1 -516 5605 5393 1676 159 10 48 chr20 43500679 43500993 -23167012 - AluJb SINE Alu -10 302 1 2289 132 0 0 chr20 43501013 43501324 -23166681 - AluSx SINE Alu -1 311 1 2008 104 0 32 chr20 43501324 43501602 -23166403 - AluSx SINE Alu -12 300 31 961 251 88 49 chr20 43502255 43502323 -23165682 - MLT1H LTR MaLR 0 549 485 1500 191 31 17 chr20 43502323 43502611 -23165394 + AluJb SINE Alu 1 292 -20 961 251 88 49 chr20 43502611 43503015 -23164990 - MLT1H LTR MaLR -64 485 14 634 235 133 53 chr20 43503015 43503279 -23164726 + L2 LINE L2 3027 3311 -2 791 263 109 56 chr20 43503688 43504167 -23163838 - MLT1J LTR MaLR -1 510 7 319 217 17 150 chr20 43504298 43504478 -23163527 + LTR67 LTR ERVL 3 158 -399 266 275 152 51 chr20 43504589 43504672 -23163333 + LTR67 LTR ERVL 328 401 -156 2042 132 7 3 chr20 43504672 43504967 -23163038 - AluSx SINE Alu -16 296 1 266 275 152 51 chr20 43504967 43505061 -23162944 + LTR67 LTR ERVL 401 523 -34 644 289 40 13 chr20 43505071 43505296 -23162709 - MIR SINE MIR -24 238 8 2506 73 3 0 chr20 43505582 43505884 -23162121 - AluSp SINE Alu -10 303 1 1896 125 62 7 chr20 43506014 43506303 -23161702 + AluSg SINE Alu 1 305 -5 367 277 40 85 chr20 43506885 43506970 -23161035 - MIR SINE MIR -29 233 146 2119 125 0 0 chr20 43506970 43507250 -23160755 + AluSg SINE Alu 1 280 -30 186 43 0 0 chr20 43507253 43507276 -23160729 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 367 277 40 85 chr20 43507276 43507410 -23160595 - MIR SINE MIR -118 144 20 2140 84 0 60 chr20 43507433 43507732 -23160273 - AluSq SINE Alu -32 281 1 1612 159 23 65 chr20 43507962 43508270 -23159735 - AluJo SINE Alu -17 295 1 1892 138 0 17 chr20 43508302 43508598 -23159407 - AluJb SINE Alu -21 291 1 343 267 22 0 chr20 43508888 43508978 -23159027 + L2 LINE L2 2932 3023 -249 661 214 0 0 chr20 43510396 43510522 -23157483 + FLAM_A SINE Alu 4 129 -4 1981 105 94 0 chr20 43510709 43510986 -23157019 + AluSx SINE Alu 1 303 -9 1091 118 31 0 chr20 43511061 43511222 -23156783 + AluSg/x SINE Alu 130 295 -15 401 290 145 36 chr20 43511443 43511465 -23156540 + L1MC4a LINE L1 5284 5302 -819 1543 192 39 26 chr20 43511465 43511773 -23156232 + AluJb SINE Alu 1 312 0 401 290 145 36 chr20 43511773 43512026 -23155979 + L1MC4a LINE L1 5302 5589 -532 352 260 68 48 chr20 43512103 43512200 -23155805 + L1MC4a LINE L1 5704 5798 -2010 1866 170 20 7 chr20 43512200 43512500 -23155505 - AluJb SINE Alu -8 304 1 352 260 68 48 chr20 43512500 43512652 -23155353 + L1MC4a LINE L1 5798 5958 -1850 2359 107 0 0 chr20 43512664 43512963 -23155042 + AluSg SINE Alu 1 299 -11 635 64 0 0 chr20 43513592 43513670 -23154335 + AluSc SINE Alu 6 83 -226 2246 101 3 13 chr20 43513671 43513979 -23154026 + AluSg1 SINE Alu 1 305 -4 1618 123 5 0 chr20 43513979 43514198 -23153807 + AluSg/x SINE Alu 74 294 -16 1969 151 7 3 chr20 43514240 43514544 -23153461 + AluSx SINE Alu 1 305 -7 494 261 45 15 chr20 43514845 43514979 -23153026 + L3 LINE CR1 1432 1569 -8 313 271 392 0 chr20 43515183 43515364 -23152641 + MIR SINE MIR 3 254 -8 2467 85 0 3 chr20 43515370 43515677 -23152328 - AluSg SINE Alu -4 306 1 2421 82 3 0 chr20 43515727 43516030 -23151975 + AluSp SINE Alu 2 305 -8 3796 141 10 63 chr20 43516112 43516254 -23151751 + L1MB2 LINE L1 5487 5635 -536 2332 88 10 0 chr20 43516254 43516548 -23151457 + AluSx SINE Alu 7 303 -9 3796 141 10 63 chr20 43516548 43517049 -23150956 + L1MB2 LINE L1 5635 6089 -82 2210 119 16 0 chr20 43517049 43517352 -23150653 + AluSx SINE Alu 1 308 -4 3796 141 10 63 chr20 43517352 43517431 -23150574 + L1MB2 LINE L1 6089 6171 0 476 187 94 23 chr20 43518543 43518714 -23149291 - MER20B DNA MER1_type -56 727 545 * 1118 243 48 77 chr20 43518699 43518936 -23149069 - MER20B DNA MER1_type -177 606 364 2150 84 0 7 chr20 43518936 43519211 -23148794 - AluY SINE Alu -7 304 32 1118 243 48 77 chr20 43519211 43519325 -23148680 - MER20B DNA MER1_type -419 364 248 2052 126 17 0 chr20 43519325 43519618 -23148387 + AluSx SINE Alu 1 298 -14 1118 243 48 77 chr20 43519618 43519784 -23148221 - MER20B DNA MER1_type -535 248 103 225 315 55 71 chr20 43520535 43520662 -23147343 - L2 LINE L2 -9 3263 3139 2077 108 14 0 chr20 43520773 43521098 -23146907 - AluSx SINE Alu 0 312 1 1880 138 0 4 chr20 43521135 43521404 -23146601 - AluSx SINE Alu -2 310 43 578 194 36 65 chr20 43521974 43522113 -23145892 + MER20 DNA MER1_type 1 135 -84 213 281 62 42 chr20 43522671 43522767 -23145238 + MIR3 SINE MIR 109 206 -2 1992 145 0 23 chr20 43522923 43523233 -23144772 + AluSx SINE Alu 1 303 -9 788 187 0 0 chr20 43523425 43523559 -23144446 - AluJb SINE Alu -1 311 178 2133 125 0 3 chr20 43523900 43524189 -23143816 + AluSx SINE Alu 1 288 -24 388 225 142 132 chr20 43524258 43524353 -23143652 - L1ME LINE L1 -299 5822 5729 354 250 299 15 chr20 43524353 43524557 -23143448 - MIR SINE MIR 0 262 1 388 225 142 132 chr20 43524557 43524575 -23143430 - L1ME LINE L1 -392 5729 5713 2036 143 0 0 chr20 43524575 43524869 -23143136 + AluSx SINE Alu 1 294 -18 388 225 142 132 chr20 43524869 43524910 -23143095 - L1ME LINE L1 -408 5713 5674 2243 88 0 0 chr20 43524910 43525183 -23142822 - AluSx SINE Alu -12 300 28 388 225 142 132 chr20 43525183 43525228 -23142777 - L1ME LINE L1 -447 5674 5631 10889 25 2 144 chr20 43525228 43526833 -23141172 - SVA Other Other -6 1380 3 388 225 142 132 chr20 43526833 43527151 -23140854 - L1ME LINE L1 -490 5631 5297 1992 125 3 31 chr20 43527261 43527580 -23140425 + AluSx SINE Alu 3 312 0 1821 169 7 20 chr20 43527590 43527891 -23140114 + AluJb SINE Alu 1 297 -15 1200 124 0 38 chr20 43528107 43528127 -23139878 + AluSg/x SINE Alu 117 136 -176 2360 94 0 10 chr20 43528127 43528436 -23139569 + AluSq SINE Alu 2 307 -6 1200 124 0 38 chr20 43528436 43528589 -23139416 + AluSg/x SINE Alu 136 285 -27 249 57 0 0 chr20 43528589 43528624 -23139381 + (TTAAA)n Simple_repeat Simple_repeat 3 37 0 2092 115 30 16 chr20 43528656 43528960 -23139045 + AluSx SINE Alu 3 310 -2 2446 74 0 19 chr20 43529088 43529397 -23138608 + AluY SINE Alu 1 303 -8 323 301 80 45 chr20 43529444 43529643 -23138362 + MIR SINE MIR 15 220 -42 362 364 11 33 chr20 43529823 43530007 -23137998 + L2 LINE L2 2827 3006 -266 1786 81 64 0 chr20 43530078 43530312 -23137693 - AluSq SINE Alu -2 311 63 458 98 0 0 chr20 43530385 43530693 -23137312 + AluYb8 SINE Alu 2 309 0 1900 166 3 0 chr20 43531047 43531354 -23136651 + AluJb SINE Alu 1 308 -4 1523 142 103 0 chr20 43532136 43532397 -23135608 + AluSx SINE Alu 1 288 -24 2012 63 15 30 chr20 43532878 43533147 -23134858 - AluY SINE Alu -15 296 32 21 57 0 0 chr20 43533147 43533182 -23134823 + AT_rich Low_complexity Low_complexity 1 35 0 2142 112 0 0 chr20 43533436 43533731 -23134274 - AluSx SINE Alu -3 309 15 1558 124 80 4 chr20 43533729 43533979 -23134026 - AluSx SINE Alu -43 269 1 * 1048 101 0 77 chr20 43534158 43534293 -23133712 + AluSq SINE Alu 1 122 -191 2128 79 20 17 chr20 43534293 43534585 -23133420 + AluSc SINE Alu 1 293 -16 1048 101 0 77 chr20 43534585 43534617 -23133388 + AluSq SINE Alu 122 155 -158 2026 133 0 7 chr20 43534861 43535163 -23132842 + AluSx SINE Alu 1 300 -12 592 321 96 27 chr20 43535168 43535375 -23132630 - L1ME4a LINE L1 -11 6110 5919 1722 165 28 0 chr20 43535375 43535666 -23132339 + AluJo SINE Alu 1 299 -13 592 321 96 27 chr20 43535666 43535832 -23132173 - L1ME4a LINE L1 -202 5919 5711 2112 126 0 0 chr20 43536078 43536380 -23131625 - AluSx SINE Alu -10 302 1 1840 125 3 24 chr20 43536390 43536685 -23131320 - AluSx SINE Alu -23 289 1 969 146 67 0 chr20 43536851 43537015 -23130990 - FRAM SINE Alu -5 171 1 2220 89 3 7 chr20 43537117 43537419 -23130586 - AluSx SINE Alu -11 301 1 312 336 134 13 chr20 43537739 43537888 -23130117 - L2 LINE L2 0 3272 3106 210 338 86 7 chr20 43538095 43538246 -23129759 - L2 LINE L2 -606 2708 2546 2232 95 3 0 chr20 43538547 43538852 -23129153 - AluSx SINE Alu -6 306 1 1883 142 7 0 chr20 43539013 43539302 -23128703 + AluSx SINE Alu 2 292 -20 2064 128 0 3 chr20 43540094 43540399 -23127606 - AluSx SINE Alu -8 304 1 283 232 54 62 chr20 43540403 43540515 -23127490 + MIR SINE MIR 122 232 -30 * 548 296 73 16 chr20 43540489 43540694 -23127311 - MIR SINE MIR -31 231 17 2235 61 3 17 chr20 43540953 43541250 -23126755 + AluY SINE Alu 1 293 -18 351 167 26 0 chr20 43541255 43541369 -23126636 + (TA)n Simple_repeat Simple_repeat 2 118 0 310 279 34 55 chr20 43541369 43541496 -23126509 + L1MC4 LINE L1 6583 6705 -1337 1314 271 86 27 chr20 43541581 43541827 -23126178 - L2 LINE L2 -1710 1604 1374 1641 169 24 10 chr20 43541827 43542117 -23125888 - AluJb SINE Alu -18 294 1 1314 271 86 27 chr20 43542117 43542349 -23125656 - L2 LINE L2 -1940 1374 1098 367 239 28 55 chr20 43542916 43543025 -23124980 - MER81 DNA DNA -5 109 4 243 360 70 35 chr20 43543416 43543588 -23124417 + L2 LINE L2 3087 3264 -8 1090 284 83 33 chr20 43543620 43543865 -23124140 - L2 LINE L2 0 3313 3082 1911 135 10 0 chr20 43543865 43544153 -23123852 + AluSg SINE Alu 1 291 -19 1090 284 83 33 chr20 43544153 43544483 -23123522 - L2 LINE L2 -231 3082 2709 670 163 130 0 chr20 43544557 43544680 -23123325 + AluJb SINE Alu 168 306 -6 576 247 73 0 chr20 43544680 43544858 -23123147 - L2 LINE L2 -894 2420 2230 1904 109 63 0 chr20 43544895 43545180 -23122825 - AluSq SINE Alu -8 305 3 192 216 0 0 chr20 43545214 43545265 -23122740 + T-rich Low_complexity Low_complexity 1 51 0 462 158 58 17 chr20 43545265 43545385 -23122620 + MER104 DNA Tc2 56 180 0 2172 247 45 38 chr20 43545385 43545518 -23122487 - L2 LINE L2 -1095 2219 2088 2066 119 0 10 chr20 43545518 43545830 -23122175 + AluSx SINE Alu 1 309 -3 2172 247 45 38 chr20 43545830 43546347 -23121658 - L2 LINE L2 -1226 2088 1565 740 164 31 0 chr20 43546375 43546503 -23121502 - FLAM_C SINE Alu -1 132 1 2152 111 3 7 chr20 43546559 43546865 -23121140 - AluSx SINE Alu -7 305 1 1238 125 0 0 chr20 43546908 43547076 -23120929 - L1P3 LINE L1 -5650 811 644 987 295 89 16 chr20 43547087 43547207 -23120798 - L2 LINE L2 -1829 1485 1375 2249 78 0 14 chr20 43547207 43547503 -23120502 + AluSg SINE Alu 1 292 -18 987 295 89 16 chr20 43547503 43547765 -23120240 - L2 LINE L2 -1939 1375 1075 2324 80 0 0 chr20 43547897 43548208 -23119797 - AluY SINE Alu 0 311 1 201 329 185 7 chr20 43548228 43548374 -23119631 - MIR SINE MIR -17 245 74 513 234 90 42 chr20 43548444 43548611 -23119394 - MIR SINE MIR -59 203 29 486 294 85 35 chr20 43549761 43549962 -23118043 + MIR SINE MIR 46 256 -6 666 259 174 45 chr20 43550335 43550555 -23117450 + L2 LINE L2 2828 3018 -295 2370 82 3 0 chr20 43550555 43550861 -23117144 - AluSp SINE Alu -6 307 1 666 259 174 45 chr20 43550861 43550897 -23117108 + L2 LINE L2 3018 3048 -265 2306 87 0 0 chr20 43550897 43551197 -23116808 - AluSx SINE Alu -12 300 1 666 259 174 45 chr20 43551197 43551364 -23116641 + L2 LINE L2 3048 3307 -6 2319 61 3 3 chr20 43551697 43551990 -23116015 + AluSp SINE Alu 1 293 -20 2273 102 0 0 chr20 43552064 43552369 -23115636 + AluSg SINE Alu 1 305 -5 1421 191 0 44 chr20 43552518 43552816 -23115189 + AluJo SINE Alu 1 285 -27 3918 62 23 37 chr20 43553278 43553525 -23114480 - L1PA13 LINE L1 0 6163 5914 2275 100 3 0 chr20 43553525 43553834 -23114171 + AluSg SINE Alu 1 310 0 3918 62 23 37 chr20 43553834 43553932 -23114073 - L1PA13 LINE L1 -249 5914 5816 2030 106 3 23 chr20 43553932 43554233 -23113772 - AluSq SINE Alu -18 295 1 3918 62 23 37 chr20 43554233 43554451 -23113554 - L1PA13 LINE L1 -347 5816 5607 600 187 32 24 chr20 43555139 43555262 -23112743 - MER63 DNA MER1_type -86 750 1 2359 75 0 0 chr20 43555905 43556199 -23111806 - AluSq SINE Alu -19 294 1 2066 125 0 0 chr20 43556830 43557127 -23110878 - AluSq SINE Alu -16 297 1 649 128 0 0 chr20 43557161 43557247 -23110758 + FLAM_A SINE Alu 36 121 -21 300 307 8 70 chr20 43557267 43557508 -23110497 + L1ME4a LINE L1 5709 5934 -187 181 375 0 0 chr20 43557568 43557640 -23110365 - L2 LINE L2 -15 3257 3186 291 205 156 41 chr20 43557683 43557805 -23110200 + L1ME LINE L1 5616 5751 -370 288 206 96 0 chr20 43557815 43557888 -23110117 + FLAM_A SINE Alu 54 133 0 1278 215 16 32 chr20 43557894 43558025 -23109980 + AluJo SINE Alu 3 135 -177 2245 82 3 0 chr20 43558025 43558317 -23109688 + AluSp SINE Alu 1 293 -20 1278 215 16 32 chr20 43558317 43558496 -23109509 + AluJo SINE Alu 135 308 -4 1582 158 50 7 chr20 43558532 43558811 -23109194 + AluJo SINE Alu 3 293 -19 2152 112 0 16 chr20 43558811 43559123 -23108882 + AluSg SINE Alu 1 307 -3 1850 146 20 3 chr20 43559390 43559691 -23108314 + AluJb SINE Alu 1 306 -6 1983 81 3 65 chr20 43559834 43560166 -23107839 - AluSp SINE Alu 0 313 9 2005 80 0 8 chr20 43560166 43560429 -23107576 - AluSg SINE Alu -48 262 2 1879 139 4 0 chr20 43560429 43560730 -23107275 - AluSx SINE Alu 0 302 1 1113 264 12 68 chr20 43561384 43561521 -23106484 - L2 LINE L2 -75 3238 3095 1983 118 7 0 chr20 43561521 43561838 -23106167 + AluSx SINE Alu 1 319 0 2164 110 0 0 chr20 43561840 43562140 -23105865 + AluSx SINE Alu 1 300 -12 1113 264 12 68 chr20 43562140 43562426 -23105579 - L2 LINE L2 -219 3094 2835 2061 98 3 29 chr20 43562456 43562763 -23105242 + AluSc SINE Alu 1 299 -10 542 280 137 36 chr20 43562859 43563136 -23104869 + L1ME4a LINE L1 5513 5761 -360 2186 109 0 3 chr20 43563136 43563447 -23104558 + AluSg SINE Alu 1 310 0 542 280 137 36 chr20 43563447 43563461 -23104544 + L1ME4a LINE L1 5761 5772 -349 2099 104 21 0 chr20 43563461 43563749 -23104256 + AluSx SINE Alu 1 294 -18 542 280 137 36 chr20 43563749 43563908 -23104097 + L1ME4a LINE L1 5772 5914 -207 2139 84 0 27 chr20 43563908 43564207 -23103798 + AluY SINE Alu 1 291 -20 542 280 137 36 chr20 43564207 43564221 -23103784 + L1ME4a LINE L1 5914 5925 -196 1788 153 14 7 chr20 43564221 43564516 -23103489 + AluJb SINE Alu 1 297 -15 542 280 137 36 chr20 43564516 43564564 -23103441 + L1ME4a LINE L1 5925 5967 -154 2329 47 7 10 chr20 43564564 43564862 -23103143 + AluY SINE Alu 1 297 -14 542 280 137 36 chr20 43564862 43564898 -23103107 + L1ME4a LINE L1 5967 6121 0 263 277 43 43 chr20 43565047 43565141 -23102864 - L2 LINE L2 -46 3226 3133 2164 93 10 0 chr20 43565989 43566278 -23101727 + AluSx SINE Alu 1 292 -20 2030 117 0 10 chr20 43566291 43566591 -23101414 + AluSc SINE Alu 1 297 -12 1130 98 57 122 chr20 43566726 43566806 -23101199 - MER30 DNA MER1_type 0 230 146 2280 39 42 3 chr20 43566806 43567092 -23100913 - AluY SINE Alu -14 297 1 1130 98 57 122 chr20 43567092 43567123 -23100882 - MER30 DNA MER1_type -84 146 115 1620 134 16 84 chr20 43567123 43567271 -23100734 + AluSx SINE Alu 1 117 -195 1956 135 7 0 chr20 43567271 43567567 -23100438 + AluSx SINE Alu 1 298 -14 1620 134 16 84 chr20 43567567 43567739 -23100266 + AluSx SINE Alu 117 299 -13 1130 98 57 122 chr20 43567739 43567765 -23100240 - MER30 DNA MER1_type -115 115 89 2326 93 0 0 chr20 43567765 43568075 -23099930 - AluY SINE Alu -1 310 1 1130 98 57 122 chr20 43568075 43568181 -23099824 - MER30 DNA MER1_type -141 89 1 876 189 23 6 chr20 43568193 43568368 -23099637 + AluJo SINE Alu 87 264 -48 424 146 22 0 chr20 43568617 43568706 -23099299 + GA-rich Low_complexity Low_complexity 4 94 0 247 254 142 62 chr20 43568900 43568961 -23099044 - L2 LINE L2 -860 2454 2399 2049 94 24 0 chr20 43568961 43569248 -23098757 + AluSq SINE Alu 1 294 -19 247 254 142 62 chr20 43569248 43569426 -23098579 - L2 LINE L2 -915 2399 2196 1452 202 163 37 chr20 43569782 43570218 -23097787 + MLT1G3 LTR MaLR 1 491 -39 1120 129 0 50 chr20 43570253 43570269 -23097736 - AluJo SINE Alu 0 312 297 2236 105 0 3 chr20 43570269 43570582 -23097423 - AluSx SINE Alu 0 312 1 1120 129 0 50 chr20 43570582 43570766 -23097239 - AluJo SINE Alu -15 297 122 2313 62 3 7 chr20 43570780 43571086 -23096919 + AluY SINE Alu 1 305 -6 225 0 0 0 chr20 43571086 43571111 -23096894 + (TA)n Simple_repeat Simple_repeat 2 26 0 * 252 0 0 0 chr20 43571110 43571138 -23096867 + (GA)n Simple_repeat Simple_repeat 2 29 0 2816 16 0 0 chr20 43571360 43571678 -23096327 + AluYb8 SINE Alu 1 318 0 2229 66 17 3 chr20 43571983 43572272 -23095733 + AluSp SINE Alu 1 293 -20 33 0 0 0 chr20 43572272 43572305 -23095700 + AT_rich Low_complexity Low_complexity 1 33 0 907 102 0 0 chr20 43572316 43572434 -23095571 + FLAM_C SINE Alu 1 118 -25 679 162 0 0 chr20 43572509 43572608 -23095397 - AluJ/FLAM SINE Alu -212 100 2 338 116 49 0 chr20 43572610 43572675 -23095330 + MLT1F LTR MaLR 486 555 0 192 200 20 80 chr20 43572716 43572766 -23095239 - MIR3 SINE MIR -48 160 114 2194 108 0 0 chr20 43573109 43573406 -23094599 + AluSx SINE Alu 1 297 -15 300 241 116 27 chr20 43573417 43573529 -23094476 - L1MC4 LINE L1 -27 8015 7894 2254 98 0 0 chr20 43573567 43573864 -23094141 + AluSx SINE Alu 1 297 -15 894 144 68 0 chr20 43573883 43574029 -23093976 - AluSg/x SINE Alu -10 302 147 1897 102 35 18 chr20 43574051 43574336 -23093669 - AluSg SINE Alu -20 290 1 272 247 14 0 chr20 43574343 43574416 -23093589 - L1MC4 LINE L1 -139 7903 7830 * 499 228 172 51 chr20 43574412 43574592 -23093413 - L1MC5 LINE L1 -276 7685 7528 1728 175 0 0 chr20 43574592 43574889 -23093116 - AluJo SINE Alu -15 297 1 499 228 172 51 chr20 43574889 43575081 -23092924 - L1MC5 LINE L1 -433 7528 7268 2351 48 3 0 chr20 43575137 43575447 -23092558 - AluY SINE Alu 0 312 2 528 56 0 0 chr20 43575582 43575654 -23092351 + Alu SINE Alu 230 301 -9 1013 113 13 19 chr20 43575657 43575816 -23092189 + LTR8 LTR ERV1 526 683 -8 199 328 62 55 chr20 43575829 43575957 -23092048 - L2 LINE L2 -97 3175 3047 1114 124 0 0 chr20 43577064 43577225 -23090780 - AluSg/x SINE Alu -15 297 137 1895 139 14 0 chr20 43577252 43577546 -23090459 + AluSx SINE Alu 1 298 -14 1005 153 0 17 chr20 43577546 43577722 -23090283 + AluJb SINE Alu 134 306 -6 730 177 233 45 chr20 43577722 43577988 -23090017 - L1ME1 LINE L1 -255 5911 5596 1108 151 0 0 chr20 43577990 43578156 -23089849 - AluSg/x SINE Alu -10 300 135 2428 52 10 3 chr20 43578158 43578463 -23089542 - AluY SINE Alu -4 307 1 1217 153 42 21 chr20 43578464 43578492 -23089513 - L1ME1 LINE L1 -564 5602 5576 1748 123 3 48 chr20 43578492 43578808 -23089197 + AluSg SINE Alu 1 303 0 1217 153 42 21 chr20 43578808 43579019 -23088986 - L1ME1 LINE L1 -590 5576 5357 221 163 122 0 chr20 43579019 43579068 -23088937 - L2 LINE L2 -800 2514 2460 229 320 13 0 chr20 43579421 43579496 -23088509 + MIR SINE MIR 67 142 -120 567 172 13 133 chr20 43579524 43579675 -23088330 + AluJo SINE Alu 123 255 -57 252 133 157 36 chr20 43579677 43579760 -23088245 + AluJo/FRAM SINE Alu 205 297 -5 1895 163 0 0 chr20 43579830 43580136 -23087869 - AluSx SINE Alu -6 306 1 2036 83 13 20 chr20 43580259 43580559 -23087446 + AluSq SINE Alu 1 298 -15 718 183 0 46 chr20 43580792 43580923 -23087082 - FLAM_C SINE Alu -17 126 2 733 134 0 82 chr20 43580981 43581115 -23086890 - FLAM_C SINE Alu -18 125 3 1962 146 3 3 chr20 43581126 43581413 -23086592 - AluSx SINE Alu -25 287 1 1341 102 5 11 chr20 43582363 43582550 -23085455 + AluSx SINE Alu 2 187 -125 2232 104 3 3 chr20 43582550 43582837 -23085168 - AluSx SINE Alu -25 287 1 340 225 25 0 chr20 43582842 43582922 -23085083 - MIR SINE MIR -21 241 160 * 964 193 64 0 chr20 43582918 43583105 -23084900 + MIR SINE MIR 8 206 -56 368 158 0 0 chr20 43583120 43583177 -23084828 + AluSg/x SINE Alu 129 185 -117 496 193 21 93 chr20 43583207 43583257 -23084748 - MIR SINE MIR -115 147 95 2067 149 3 0 chr20 43583257 43583552 -23084453 + AluSx SINE Alu 1 296 -16 496 193 21 93 chr20 43583552 43583641 -23084364 - MIR SINE MIR -167 95 18 1537 148 22 26 chr20 43584001 43584272 -23083733 - AluJo SINE Alu -31 281 12 207 343 46 9 chr20 43584348 43584456 -23083549 - L2 LINE L2 -38 3234 3123 1697 135 10 40 chr20 43584667 43584797 -23083208 + AluJo SINE Alu 15 147 -165 2238 64 6 73 chr20 43584797 43585111 -23082894 + AluSc SINE Alu 7 299 -10 1697 135 10 40 chr20 43585111 43585284 -23082721 + AluJo SINE Alu 147 309 -3 180 0 0 0 chr20 43585620 43585640 -23082365 + (CCCCG)n Simple_repeat Simple_repeat 5 24 0 29 106 0 0 chr20 43585807 43585920 -23082085 + GC_rich Low_complexity Low_complexity 1 113 0 181 185 74 0 chr20 43586659 43586713 -23081292 - MIR SINE MIR -186 76 19 2453 69 0 7 chr20 43586831 43587136 -23080869 - AluSc SINE Alu -6 303 1 1347 140 0 173 chr20 43587322 43587521 -23080484 - AluJb SINE Alu -10 302 193 1536 138 115 4 chr20 43587521 43587774 -23080231 - AluSx SINE Alu -30 282 2 1347 140 0 173 chr20 43587774 43587938 -23080067 - AluJb SINE Alu -119 193 2 316 231 26 0 chr20 43588305 43588383 -23079622 + MIR SINE MIR 77 156 -106 1802 118 84 11 chr20 43588480 43588767 -23079238 + AluSg SINE Alu 1 306 0 225 312 13 13 chr20 43588804 43588881 -23079124 - L2 LINE L2 -1 3271 3195 1411 113 0 0 chr20 43589593 43589779 -23078226 - AluSg/x SINE Alu 0 312 127 2270 90 3 29 chr20 43589782 43590092 -23077913 - AluSg SINE Alu -8 302 1 2564 69 10 0 chr20 43590100 43590406 -23077599 - AluSp SINE Alu -4 309 1 2259 95 0 10 chr20 43590564 43590859 -23077146 + AluSg SINE Alu 1 292 -18 778 165 0 8 chr20 43590945 43591078 -23076927 + FLAM_C SINE Alu 2 133 0 1621 188 16 20 chr20 43591100 43591404 -23076601 + AluJo SINE Alu 1 303 -9 2231 128 7 3 chr20 43591577 43591881 -23076124 - AluSx SINE Alu -7 305 1 2025 143 3 7 chr20 43591991 43592285 -23075720 + AluJo SINE Alu 1 293 -19 2101 105 40 20 chr20 43592871 43593028 -23074977 - AluSq SINE Alu -11 302 135 2286 76 7 30 chr20 43593028 43593330 -23074675 - AluSg SINE Alu -15 295 1 2101 105 40 20 chr20 43593330 43593468 -23074537 - AluSq SINE Alu -178 135 1 1987 151 10 3 chr20 43593618 43593916 -23074089 - AluJo SINE Alu -12 300 1 2237 106 17 0 chr20 43593950 43594242 -23073763 - AluSx SINE Alu -8 304 8 1347 224 156 43 chr20 43594248 43594398 -23073607 - L1ME2 LINE L1 -56 6108 5976 225 0 0 0 chr20 43594398 43594423 -23073582 + (TG)n Simple_repeat Simple_repeat 2 26 0 1642 93 35 97 chr20 43594425 43594548 -23073457 - L1PA15 LINE L1 -8 6157 6028 2078 114 7 46 chr20 43594548 43594855 -23073150 - AluSx SINE Alu -17 295 1 1642 93 35 97 chr20 43594855 43595042 -23072963 - L1PA15 LINE L1 -137 6028 5866 1347 224 156 43 chr20 43595042 43595402 -23072603 - L1ME2 LINE L1 -188 5976 5537 730 128 45 30 chr20 43595547 43595680 -23072325 - FLAM_C SINE Alu -8 135 1 204 278 72 41 chr20 43595761 43595858 -23072147 - L2 LINE L2 -12 3260 3161 6396 35 10 3 chr20 43596243 43596988 -23071017 + SVA Other Other 669 1418 0 2404 97 3 3 chr20 43597211 43597519 -23070486 + AluSq SINE Alu 1 308 -5 1011 181 46 119 chr20 43598014 43598123 -23069882 - L1MB2 LINE L1 -33 6138 6023 671 226 0 0 chr20 43598123 43598256 -23069749 + FLAM_C SINE Alu 1 133 0 1011 181 46 119 chr20 43598256 43598274 -23069731 - L1MB2 LINE L1 -148 6023 6005 1651 160 24 14 chr20 43598274 43598562 -23069443 + AluJo SINE Alu 5 295 -17 1011 181 46 119 chr20 43598562 43598660 -23069345 - L1MB2 LINE L1 -166 6005 5901 2068 145 10 0 chr20 43598660 43598964 -23069041 - AluSx SINE Alu -5 307 1 1011 181 46 119 chr20 43598964 43599122 -23068883 - L1MB2 LINE L1 -270 5901 5782 2295 94 10 19 chr20 43599122 43599429 -23068576 - AluSg SINE Alu -6 304 1 1011 181 46 119 chr20 43599429 43599452 -23068553 - L1MB2 LINE L1 -389 5782 5759 914 244 56 26 chr20 43599497 43599763 -23068242 - L1ME1 LINE L1 -77 6089 5816 358 314 8 8 chr20 43601942 43602066 -23065939 - MIR SINE MIR -71 191 68 2393 96 0 7 chr20 43602188 43602490 -23065515 - AluSg SINE Alu -10 300 1 233 176 20 0 chr20 43602514 43602565 -23065440 - Alu SINE Alu -11 290 239 1600 189 21 14 chr20 43602568 43602853 -23065152 - AluJb SINE Alu -15 297 11 2356 100 3 6 chr20 43602860 43603171 -23064834 - AluSg SINE Alu 0 310 1 829 139 0 0 chr20 43603171 43603300 -23064705 - FLAM_C SINE Alu -2 141 13 1016 154 59 6 chr20 43603331 43603500 -23064505 + FRAM SINE Alu 1 173 -3 2254 129 0 0 chr20 43603503 43603812 -23064193 + AluSp SINE Alu 3 311 -2 2197 112 0 0 chr20 43603812 43604117 -23063888 - AluSq SINE Alu 0 305 1 1598 104 18 5 chr20 43604177 43604398 -23063607 + AluSg/x SINE Alu 66 289 -23 2502 74 3 0 chr20 43604400 43604699 -23063306 + AluSp SINE Alu 9 308 -5 256 337 48 48 chr20 43605915 43606081 -23061924 + MIR3 SINE MIR 5 170 -38 2148 105 24 3 chr20 43606370 43606664 -23061341 + AluSx SINE Alu 1 300 -12 2144 128 16 10 chr20 43606823 43607129 -23060876 - AluSg SINE Alu 0 310 3 1239 181 161 4 chr20 43607131 43607379 -23060626 - AluJo SINE Alu -15 287 1 2299 106 0 3 chr20 43607435 43607727 -23060278 - AluSq SINE Alu -22 291 1 269 221 6 128 chr20 43607739 43607911 -23060094 - HAL1 LINE L1 -2330 177 27 438 350 56 43 chr20 43608048 43608462 -23059543 + L2 LINE L2 2836 3254 -18 316 289 107 25 chr20 43608538 43608697 -23059308 - LTR16A1 LTR ERVL 0 457 286 2096 82 0 0 chr20 43608830 43609087 -23058918 - AluSx SINE Alu 0 312 56 1167 61 0 0 chr20 43609389 43609520 -23058485 - AluSq/x SINE Alu -181 131 1 200 280 112 56 chr20 43609623 43609748 -23058257 - MIR SINE MIR -27 235 104 26 0 0 0 chr20 43609923 43609949 -23058056 + AT_rich Low_complexity Low_complexity 1 26 0 1222 133 0 0 chr20 43609949 43610122 -23057883 - AluSg/x SINE Alu -3 307 135 307 152 0 0 chr20 43610123 43610169 -23057836 - Alu SINE Alu -256 46 1 2116 121 7 10 chr20 43610180 43610477 -23057528 - AluSp SINE Alu -16 297 2 34 24 0 0 chr20 43610477 43610518 -23057487 + AT_rich Low_complexity Low_complexity 1 41 0 295 299 119 0 chr20 43610646 43610780 -23057225 - MIR3 SINE MIR -18 190 41 670 197 0 0 chr20 43611289 43611406 -23056599 + AluJb SINE Alu 2 118 -194 26 0 0 0 chr20 43611408 43611434 -23056571 + AT_rich Low_complexity Low_complexity 1 26 0 743 216 75 10 chr20 43611465 43611664 -23056341 - L1ME1 LINE L1 -54 6112 5901 1947 149 7 3 chr20 43611679 43611967 -23056038 - AluSx SINE Alu -22 290 2 1891 142 35 3 chr20 43611980 43612269 -23055736 - AluSx SINE Alu -10 302 5 1587 172 12 0 chr20 43612409 43612659 -23055346 + AluJb SINE Alu 5 257 -55 33 20 0 20 chr20 43612659 43612687 -23055318 + AT_rich Low_complexity Low_complexity 1 29 -21 2519 73 0 0 chr20 43612687 43612990 -23055015 + AluY SINE Alu 1 303 -8 33 20 0 20 chr20 43612990 43613012 -23054993 + AT_rich Low_complexity Low_complexity 29 50 0 21 0 0 0 chr20 43613111 43613132 -23054873 + AT_rich Low_complexity Low_complexity 1 21 0 2057 122 13 26 chr20 43613674 43613977 -23054028 - AluSq SINE Alu -14 299 1 337 280 87 40 chr20 43614023 43614173 -23053832 - L1ME1 LINE L1 -2023 5785 5629 1161 190 28 0 chr20 43614206 43614417 -23053588 + AluJo SINE Alu 1 217 -95 351 199 23 0 chr20 43614417 43614502 -23053503 + Alu SINE Alu 1 52 -250 1007 112 12 59 chr20 43614503 43614672 -23053333 + AluSg/x SINE Alu 138 298 -11 2191 83 72 0 chr20 43614880 43615157 -23052848 - AluSp SINE Alu -16 297 1 367 300 108 40 chr20 43615243 43615370 -23052635 - L1ME LINE L1 -318 5803 5686 2351 93 0 0 chr20 43615370 43615661 -23052344 - AluSc SINE Alu -18 291 1 367 300 108 40 chr20 43615661 43615903 -23052102 - L1ME LINE L1 -435 5686 5409 298 91 23 159 chr20 43615916 43615964 -23052041 - L1MA9 LINE L1 0 6312 6259 2043 140 7 3 chr20 43615964 43616257 -23051748 + AluSx SINE Alu 1 294 -18 2452 68 0 39 chr20 43616258 43616569 -23051436 + AluY SINE Alu 1 299 -12 298 91 23 159 chr20 43616569 43616606 -23051399 - L1MA9 LINE L1 -52 6260 6237 369 266 102 16 chr20 43616693 43616821 -23051184 - L1ME LINE L1 -817 5329 5191 830 130 69 0 chr20 43616854 43616985 -23051020 - FLAM_C SINE Alu -2 141 2 2497 64 0 3 chr20 43617002 43617298 -23050707 - AluY SINE Alu 0 311 17 1078 183 26 136 chr20 43617300 43617639 -23050366 - AluJo SINE Alu 0 302 1 2293 107 0 23 chr20 43617673 43617982 -23050023 - AluSq SINE Alu -11 302 1 538 223 179 30 chr20 43618037 43618344 -23049661 - L1MC4 LINE L1 -96 7712 7391 221 313 50 10 chr20 43618781 43618880 -23049125 - L2 LINE L2 -16 3256 3154 236 229 16 0 chr20 43618937 43618998 -23049007 - L2 LINE L2 -222 3050 2989 338 241 126 0 chr20 43619390 43619477 -23048528 - MIR SINE MIR -90 172 75 387 339 72 4 chr20 43619589 43619825 -23048180 - MIR SINE MIR -1 261 10 1855 157 0 51 chr20 43620375 43620520 -23047485 + AluJo SINE Alu 1 123 -189 1857 102 147 0 chr20 43620520 43620786 -23047219 + AluSx SINE Alu 1 305 -7 1855 157 0 51 chr20 43620786 43620952 -23047053 + AluJo SINE Alu 123 296 -16 264 252 48 48 chr20 43621578 43621681 -23046324 - L2 LINE L2 -43 3270 3168 1064 155 183 66 chr20 43622417 43622650 -23045355 - MLT1B LTR MaLR 0 390 101 1977 109 20 53 chr20 43622650 43622952 -23045053 - AluSx SINE Alu -20 292 1 1064 155 183 66 chr20 43622952 43623067 -23044938 - MLT1B LTR MaLR -289 101 1 462 280 113 11 chr20 43623273 43623459 -23044546 + MIR SINE MIR 46 250 -12 1018 196 15 39 chr20 43624234 43624309 -23043696 - AluJo SINE Alu -113 199 124 2375 82 0 0 chr20 43624309 43624636 -23043369 - AluY SINE Alu 0 327 1 1018 196 15 39 chr20 43624636 43624763 -23043242 - AluJo SINE Alu -188 124 1 1727 137 6 104 chr20 43625227 43625356 -23042649 + AluJo SINE Alu 6 146 -166 2414 95 0 0 chr20 43625356 43625650 -23042355 - AluSg SINE Alu -16 294 1 1727 137 6 104 chr20 43625650 43625855 -23042150 + AluJo SINE Alu 146 307 -5 360 212 177 0 chr20 43626070 43626183 -23041822 - L1MEc LINE L1 -4602 1794 1662 898 67 42 8 chr20 43626191 43626311 -23041694 - AluSq/x SINE Alu -174 138 15 1716 190 10 0 chr20 43626747 43627036 -23040969 - AluJb SINE Alu -20 292 1 1528 187 30 30 chr20 43627071 43627370 -23040635 - AluJo SINE Alu -13 299 1 2455 85 3 0 chr20 43632018 43632323 -23035682 - AluSp SINE Alu -7 306 1 181 270 180 11 chr20 43632729 43632818 -23035187 + MIR SINE MIR 23 126 -82 2306 79 3 10 chr20 43633273 43633565 -23034440 - AluY SINE Alu -21 290 1 191 336 99 8 chr20 43633588 43633719 -23034286 - MIR3 SINE MIR -31 177 35 293 274 84 50 chr20 43634017 43634196 -23033809 + L2 LINE L2 2921 3105 -208 230 212 121 0 chr20 43634387 43634453 -23033552 - MIR3 SINE MIR -50 158 85 238 217 71 159 chr20 43636652 43636674 -23031331 - L2 LINE L2 -1 3312 3290 1852 157 0 23 chr20 43636674 43636979 -23031026 + AluJb SINE Alu 1 298 -14 238 217 71 159 chr20 43636979 43637068 -23030937 - L2 LINE L2 -23 3290 3195 1626 157 92 18 chr20 43637068 43637349 -23030656 + AluJb SINE Alu 1 302 -10 238 217 71 159 chr20 43637349 43637374 -23030631 - L2 LINE L2 -118 3195 3169 2450 84 0 13 chr20 43637374 43637682 -23030323 - AluY SINE Alu -7 304 1 238 217 71 159 chr20 43637682 43637769 -23030236 - L2 LINE L2 -144 3169 3107 2338 84 10 14 chr20 43638126 43638422 -23029583 + AluSp SINE Alu 1 295 -18 382 235 36 66 chr20 43638668 43638834 -23029171 + MLT1H LTR MaLR 387 547 -2 225 299 153 7 chr20 43639226 43639370 -23028635 + MIR SINE MIR 21 185 -77 5272 161 128 12 chr20 43639626 43640769 -23027236 - MER52C LTR ERV1 0 1278 4 752 223 194 64 chr20 43640844 43641156 -23026849 - L1ME3A LINE L1 -7 6163 5893 1699 165 13 35 chr20 43641156 43641472 -23026533 - AluJo SINE Alu -3 309 1 924 115 49 22 chr20 43641474 43641657 -23026348 - L1MA7 LINE L1 -1 6290 6103 752 223 194 64 chr20 43641657 43641749 -23026256 - L1ME3A LINE L1 -277 5893 5703 482 192 0 30 chr20 43641749 43641848 -23026157 + SVA Other Other 508 603 -783 293 211 56 22 chr20 43641950 43642040 -23025965 - L1ME3A LINE L1 -456 5714 5622 251 248 46 98 chr20 43642061 43642102 -23025903 + MIR SINE MIR 68 110 -152 2158 115 30 7 chr20 43642102 43642397 -23025608 - AluSx SINE Alu -10 302 1 251 248 46 98 chr20 43642397 43642508 -23025497 + MIR SINE MIR 110 212 -50 1334 157 9 5 chr20 43643077 43643293 -23024712 + AluJo SINE Alu 87 303 -9 1537 255 33 73 chr20 43643582 43643678 -23024327 - L1MC4a LINE L1 -1830 5978 5880 2290 103 7 0 chr20 43643678 43643988 -23024017 - AluSx SINE Alu 0 312 1 1537 255 33 73 chr20 43643988 43644015 -23023990 - L1MC4a LINE L1 -1928 5880 5853 1012 236 28 0 chr20 43644015 43644231 -23023774 + MER58A DNA MER1_type 3 224 0 1537 255 33 73 chr20 43644231 43644378 -23023627 - L1MC4a LINE L1 -1955 5853 5702 466 190 147 0 chr20 43644378 43644494 -23023511 - FLAM_A SINE Alu 0 133 1 1537 255 33 73 chr20 43644494 43644864 -23023141 - L1MC4a LINE L1 -2106 5702 5362 2303 95 7 3 chr20 43645793 43646098 -23021907 - AluSx SINE Alu 0 312 7 311 266 37 46 chr20 43646480 43646589 -23021416 + L1M4 LINE L1 4490 4597 -1549 930 225 43 10 chr20 43646731 43646940 -23021065 + MER58A DNA MER1_type 6 221 -3 274 233 0 17 chr20 43646961 43647021 -23020984 + MIR SINE MIR 41 99 -163 324 48 0 0 chr20 43647021 43647063 -23020942 + (TG)n Simple_repeat Simple_repeat 2 43 0 953 244 99 44 chr20 43647477 43647842 -23020163 - MLT1I LTR MaLR 0 409 25 1992 135 21 0 chr20 43648242 43648524 -23019481 + AluJb SINE Alu 1 288 -24 23 0 0 29 chr20 43648524 43648537 -23019468 + AT_rich Low_complexity Low_complexity 1 13 -20 2430 69 0 0 chr20 43648537 43648827 -23019178 - AluY SINE Alu -21 290 1 23 0 0 29 chr20 43648827 43648847 -23019158 + AT_rich Low_complexity Low_complexity 13 33 0 1680 164 10 10 chr20 43648952 43649250 -23018755 - AluJo SINE Alu -14 298 1 2415 88 0 3 chr20 43649599 43649907 -23018098 - AluSg SINE Alu -3 307 1 234 345 166 0 chr20 43650303 43650442 -23017563 - L3 LINE CR1 -4 1573 1412 345 176 0 29 chr20 43651159 43651205 -23016800 + MLT1B LTR MaLR 1 44 -346 1899 107 158 75 chr20 43651205 43651578 -23016427 - MER4A LTR ERV1 0 664 261 672 50 10 30 chr20 43651578 43651678 -23016327 - MER4A LTR ERV1 -566 98 1 * 1396 178 66 49 chr20 43651678 43652021 -23015984 + MLT1B LTR MaLR 43 457 0 2270 107 0 0 chr20 43652197 43652488 -23015517 - AluSx SINE Alu -21 291 1 237 310 122 33 chr20 43652540 43652933 -23015072 - L1M4 LINE L1 -2931 3215 2788 2036 107 7 7 chr20 43653387 43653659 -23014346 - AluSx SINE Alu -40 272 1 2232 114 0 3 chr20 43653669 43653959 -23014046 - AluSg SINE Alu -21 289 1 952 181 201 36 chr20 43653969 43654218 -23013787 - AluJo SINE Alu -10 292 3 312 266 43 21 chr20 43654686 43654780 -23013225 - LTR16C LTR ERVL -11 480 385 2499 92 0 3 chr20 43654859 43655173 -23012832 - AluSp SINE Alu 0 313 1 520 324 88 15 chr20 43655303 43655472 -23012533 - LTR16C LTR ERVL -142 349 153 2086 189 65 7 chr20 43655472 43655931 -23012074 + MER66B LTR ERV1 1 486 0 520 324 88 15 chr20 43655931 43656023 -23011982 - LTR16C LTR ERVL -338 153 69 482 238 73 26 chr20 43656144 43656295 -23011710 + MER63B DNA MER1_type 16 173 -263 901 81 0 0 chr20 43656370 43656481 -23011524 - AluSg/x SINE Alu -9 301 191 661 137 0 0 chr20 43656507 43656609 -23011396 - AluS SINE Alu -211 102 1 249 252 112 0 chr20 43656767 43656874 -23011131 - L2 LINE L2 -240 3032 2914 2020 167 0 0 chr20 43657125 43657436 -23010569 + AluJb SINE Alu 1 311 -1 202 318 182 0 chr20 43657685 43657795 -23010210 + MIR3 SINE MIR 35 164 -44 414 191 82 18 chr20 43658427 43658537 -23009468 - MER53 DNA DNA 0 189 73 1167 110 0 0 chr20 43658544 43658690 -23009315 + AluSq SINE Alu 1 146 -167 1237 99 0 0 chr20 43658753 43658915 -23009090 + AluSq SINE Alu 152 313 0 437 94 0 0 chr20 43658924 43658988 -23009017 - MER53 DNA DNA -125 64 1 699 202 0 0 chr20 43659238 43659367 -23008638 + FLAM_A SINE Alu 1 129 -4 276 297 77 41 chr20 43659697 43659892 -23008113 + L2 LINE L2 2401 2602 -712 2402 105 0 10 chr20 43659949 43660263 -23007742 - AluSx SINE Alu -1 311 1 600 332 23 35 chr20 43660669 43660771 -23007234 + L2 LINE L2 2307 2409 -905 2164 154 146 34 chr20 43660771 43661238 -23006767 - MLT2B1 LTR ERVL 0 520 2 600 332 23 35 chr20 43661238 43661481 -23006524 + L2 LINE L2 2409 2648 -666 625 65 0 0 chr20 43711582 43711659 -22956346 - Alu SINE Alu -232 78 2 1117 156 5 15 chr20 43711660 43711859 -22956146 - MSTA LTR MaLR -230 198 2 248 178 0 0 chr20 43711861 43711906 -22956099 - Alu SINE Alu -120 179 135 1232 281 79 14 chr20 43711915 43712653 -22955352 + L2 LINE L2 2527 3312 -1 2158 133 0 0 chr20 43712676 43712970 -22955035 + AluSx SINE Alu 1 294 -18 197 289 84 24 chr20 43714016 43714099 -22953906 - L2 LINE L2 -1546 1768 1681 1837 139 3 78 chr20 43714100 43714432 -22953573 + AluJb SINE Alu 1 307 -5 487 232 145 54 chr20 43714516 43714729 -22953276 - HAL1b LINE L1 -124 1224 979 2366 112 0 0 chr20 43714729 43715034 -22952971 - AluSq SINE Alu -8 305 1 487 232 145 54 chr20 43715034 43715096 -22952909 - HAL1b LINE L1 -369 979 924 2432 116 27 46 chr20 43715264 43715635 -22952370 - THE1B LTR MaLR 0 364 1 481 248 64 0 chr20 43715718 43715859 -22952146 - L1ME1 LINE L1 -105 6061 5912 675 107 13 138 chr20 43715866 43715916 -22952089 - THE1C LTR MaLR 0 375 320 2250 92 0 0 chr20 43715916 43716189 -22951816 + AluSg SINE Alu 20 292 -18 675 107 13 138 chr20 43716189 43716297 -22951708 - THE1C LTR MaLR -55 320 237 543 280 114 53 chr20 43716305 43716701 -22951304 - HAL1 LINE L1 -1946 561 142 2232 120 3 0 chr20 43716706 43717005 -22951000 - AluSx SINE Alu -12 300 1 990 173 0 19 chr20 43717683 43717845 -22950160 + FRAM SINE Alu 1 158 -18 2128 122 3 0 chr20 43717853 43718148 -22949857 + AluSx SINE Alu 4 299 -13 2377 108 0 0 chr20 43718511 43718816 -22949189 + AluSq SINE Alu 1 305 -8 550 236 68 6 chr20 43719285 43719446 -22948559 - LTR37A LTR ERV1 -58 368 198 1222 189 126 15 chr20 43719903 43720173 -22947832 - AluJo SINE Alu -12 300 1 1917 130 0 11 chr20 43720799 43721075 -22946930 - AluSc SINE Alu -36 273 1 1904 163 0 0 chr20 43721075 43721357 -22946648 - AluSx SINE Alu -9 303 21 189 230 299 0 chr20 43721387 43721474 -22946531 + MIR SINE MIR 150 262 0 546 250 18 6 chr20 43721482 43721646 -22946359 + L1ME3A LINE L1 5817 5982 -188 1081 120 11 21 chr20 43721716 43721907 -22946098 + L1MA6 LINE L1 6112 6300 0 1657 184 7 10 chr20 43721916 43722210 -22945795 + AluJo SINE Alu 7 299 -13 518 185 84 8 chr20 43722310 43722429 -22945576 + L1ME3A LINE L1 6042 6169 -1 2273 103 3 3 chr20 43722432 43722732 -22945273 + AluSx SINE Alu 1 300 -12 505 222 86 0 chr20 43722872 43722989 -22945016 - L2 LINE L2 -5 3308 3182 213 234 0 0 chr20 43724125 43724172 -22943833 + L2 LINE L2 3263 3309 -4 309 340 10 0 chr20 43724187 43724290 -22943715 - MIR SINE MIR -99 163 60 242 267 81 0 chr20 43724568 43724654 -22943351 + L2 LINE L2 3174 3266 -6 230 287 23 0 chr20 43725062 43725149 -22942856 + (TG)n Simple_repeat Simple_repeat 1 89 0 494 268 63 58 chr20 43725412 43725602 -22942403 - MIR3 SINE MIR -8 200 10 404 67 17 0 chr20 43726628 43726688 -22941317 + (GGGA)n Simple_repeat Simple_repeat 4 64 0 509 143 0 0 chr20 43726749 43726819 -22941186 + AluJb SINE Alu 150 219 -93 210 162 0 27 chr20 43726843 43726880 -22941125 + MIR SINE MIR 109 144 -64 395 304 9 9 chr20 43726880 43726992 -22941013 - MIR SINE MIR -60 148 37 586 275 180 5 chr20 43727098 43727320 -22940685 + MIR SINE MIR 2 262 0 2014 153 3 10 chr20 43727365 43727666 -22940339 - AluJo SINE Alu -13 299 1 551 169 8 0 chr20 43727943 43728067 -22939938 + CT-rich Low_complexity Low_complexity 1 125 0 737 223 19 0 chr20 43728087 43728244 -22939761 - MER63A DNA MER1_type -4 206 47 365 326 31 16 chr20 43728370 43728499 -22939506 - L2 LINE L2 -3 3310 3180 349 256 0 0 chr20 43728554 43728632 -22939373 - MIR SINE MIR -108 154 77 303 225 0 0 chr20 43729113 43729184 -22938821 + (CA)n Simple_repeat Simple_repeat 2 72 0 624 259 132 53 chr20 43729780 43730138 -22937867 - LTR16A1 LTR ERVL -35 415 33 1174 158 228 39 chr20 43730139 43730499 -22937506 + MSTC LTR MaLR 1 428 0 478 221 186 21 chr20 43730769 43730914 -22937091 + MER5A DNA MER1_type 14 182 -7 490 284 142 45 chr20 43731024 43731385 -22936620 - L2 LINE L2 -1 3312 2878 2227 122 3 0 chr20 43731385 43731688 -22936317 + AluSx SINE Alu 1 304 -8 490 284 142 45 chr20 43731688 43731826 -22936179 - L2 LINE L2 -435 2878 2755 772 253 6 0 chr20 43731869 43732035 -22935970 + MIR SINE MIR 65 231 -31 1883 75 55 4 chr20 43732061 43732315 -22935690 - AluY SINE Alu -13 298 32 759 272 157 69 chr20 43732316 43732820 -22935185 - L2 LINE L2 -571 2743 2196 2006 127 8 0 chr20 43732823 43733103 -22934902 + AluJb SINE Alu 1 282 -30 231 81 27 0 chr20 43733103 43733140 -22934865 + (CAAA)n Simple_repeat Simple_repeat 1 60 0 629 288 62 25 chr20 43733163 43733389 -22934616 + MIR SINE MIR 18 241 -21 375 280 19 9 chr20 43733607 43733714 -22934291 + MIR SINE MIR 39 146 -62 1968 166 68 46 chr20 43733732 43733798 -22934207 - MLT1C LTR MaLR 0 467 404 2626 54 0 10 chr20 43733798 43734112 -22933893 + AluY SINE Alu 1 311 0 1968 166 68 46 chr20 43734112 43734502 -22933503 - MLT1C LTR MaLR -63 404 1 267 293 38 28 chr20 43734860 43734966 -22933039 + ERVL LTR ERVL 2546 2652 -3002 3874 149 34 30 chr20 43735104 43735808 -22932197 + L1MC2 LINE L1 5627 6333 -11 180 97 0 0 chr20 43735809 43735840 -22932165 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 888 221 54 80 chr20 43736148 43736573 -22931432 + MER96B DNA MER1_type 4 417 0 196 204 68 0 chr20 43736604 43736648 -22931357 - L2 LINE L2 -4 3309 3263 478 305 105 13 chr20 43736758 43736997 -22931008 + ERVL LTR ERVL 4220 4480 -1284 634 262 116 18 chr20 43737027 43737252 -22930753 + ERVL LTR ERVL 4538 4784 -980 393 218 69 10 chr20 43737574 43737675 -22930330 + MER91C DNA MER1_type 7 113 -27 888 237 48 0 chr20 43737774 43738002 -22930003 - MIR SINE MIR 0 262 24 2275 121 30 19 chr20 43738382 43738753 -22929252 + THE1C LTR MaLR 1 375 0 294 315 0 27 chr20 43738895 43739006 -22928999 - MIR SINE MIR -137 125 18 247 156 67 0 chr20 43739082 43739127 -22928878 - L1MC/D LINE L1 -2342 5466 5419 1070 186 139 4 chr20 43739156 43739393 -22928612 - AluJb SINE Alu -41 271 3 3811 112 7 0 chr20 43739430 43739968 -22928037 - MER41B LTR ERV1 -86 549 8 2413 88 3 0 chr20 43739986 43740292 -22927713 - AluSp SINE Alu -6 307 1 1404 134 0 0 chr20 43740293 43740494 -22927511 - MER41B-int LTR ERV1 -17 5929 5729 567 157 22 0 chr20 43740490 43740579 -22927426 - MER41B-int LTR ERV1 -5855 91 1 * 921 130 55 0 chr20 43740580 43740700 -22927305 - MER41B LTR ERV1 -1 634 503 2471 94 0 0 chr20 43740700 43741007 -22926998 + AluSc SINE Alu 1 307 -2 921 130 55 0 chr20 43741007 43741032 -22926973 - MER41B LTR ERV1 -132 503 481 2101 119 0 3 chr20 43741421 43741735 -22926270 - AluSx SINE Alu 0 315 3 30 0 0 24 chr20 43741843 43741869 -22926136 + AT_rich Low_complexity Low_complexity 1 27 -13 2284 83 3 0 chr20 43741869 43742157 -22925848 - AluY SINE Alu -22 289 1 30 0 0 24 chr20 43742157 43742171 -22925834 + AT_rich Low_complexity Low_complexity 27 40 0 2122 116 3 0 chr20 43742171 43742455 -22925550 - AluSx SINE Alu -27 285 1 23 54 0 0 chr20 43742616 43742653 -22925352 + AT_rich Low_complexity Low_complexity 1 37 0 2249 117 7 0 chr20 43742721 43743020 -22924985 - AluSp SINE Alu -12 301 1 2231 92 33 3 chr20 43743020 43743323 -22924682 - AluSq SINE Alu -1 312 1 2229 105 7 3 chr20 43743497 43743793 -22924212 - AluSq SINE Alu -16 297 1 211 111 28 0 chr20 43743831 43743867 -22924138 + (CAAT)n Simple_repeat Simple_repeat 2 38 0 835 206 79 11 chr20 43743871 43744060 -22923945 + MER20 DNA MER1_type 10 211 -8 2262 108 16 3 chr20 43744072 43744378 -22923627 + AluSg SINE Alu 1 310 0 428 187 33 36 chr20 43744697 43744839 -22923166 + L1ME2 LINE L1 5911 6033 -131 2005 118 0 46 chr20 43744921 43745226 -22922779 - AluJo SINE Alu -21 291 1 314 134 37 24 chr20 43745379 43745461 -22922544 - L1MB2 LINE L1 -1 6170 6088 4456 141 34 68 chr20 43745501 43746176 -22921829 - L1MB3 LINE L1 -49 6134 5493 2011 111 74 27 chr20 43746176 43746474 -22921531 - AluSx SINE Alu 0 312 1 4456 141 34 68 chr20 43746474 43746696 -22921309 - L1MB3 LINE L1 -690 5493 5265 370 231 169 53 chr20 43746702 43746752 -22921253 - L1ME4a LINE L1 -277 5844 5801 2199 110 0 10 chr20 43746752 43747051 -22920954 - AluSx SINE Alu -14 298 3 370 231 169 53 chr20 43747051 43747225 -22920780 - L1ME4a LINE L1 -320 5801 5667 492 349 38 23 chr20 43747236 43747583 -22920422 - L1M4 LINE L1 -1883 4263 3912 1219 185 37 44 chr20 43747798 43748096 -22919909 - L1ME2 LINE L1 -9 6155 5860 1026 137 0 25 chr20 43748115 43748276 -22919729 - FAM SINE Alu -11 174 18 1141 149 0 0 chr20 43748367 43748535 -22919470 + FRAM SINE Alu 1 165 -11 504 286 112 70 chr20 43748543 43748882 -22919123 - L1M4 LINE L1 -2529 3617 3294 2100 142 10 0 chr20 43748882 43749191 -22918814 - AluSx SINE Alu 0 312 1 504 286 112 70 chr20 43749191 43749564 -22918441 - L1M4 LINE L1 -2852 3294 2875 2218 235 72 43 chr20 43750084 43750857 -22917148 + HAL1 LINE L1 594 1389 -1118 2181 96 23 10 chr20 43750954 43751256 -22916749 - AluSg SINE Alu -4 306 1 422 273 86 0 chr20 43751613 43751752 -22916253 - MIR SINE MIR -71 191 41 306 265 29 44 chr20 43751835 43751971 -22916034 - MLT1J LTR MaLR -270 241 108 694 325 101 22 chr20 43752655 43753289 -22914716 - L2 LINE L2 -349 2965 2282 310 314 32 52 chr20 43753304 43753372 -22914633 - L1M4 LINE L1 -1771 4375 4307 1461 195 10 43 chr20 43753372 43753674 -22914331 - AluJo SINE Alu -20 292 1 310 314 32 52 chr20 43753674 43753853 -22914152 - L1M4 LINE L1 -1839 4307 4133 822 103 0 0 chr20 43753905 43754012 -22913993 - U6 snRNA snRNA 0 107 1 1495 160 163 53 chr20 43754159 43754516 -22913489 - MSTD LTR MaLR 0 396 1 187 272 96 56 chr20 43755731 43755856 -22912149 + L2 LINE L2 3133 3262 -10 435 215 19 19 chr20 43757538 43757645 -22910360 + L2 LINE L2 2964 3070 -202 253 262 84 31 chr20 43757666 43757903 -22910102 - L2 LINE L2 0 3272 2966 1785 185 3 0 chr20 43758043 43758351 -22909654 - AluJo SINE Alu -3 309 1 660 242 20 0 chr20 43758518 43758671 -22909334 - MIR SINE MIR -91 171 16 1531 98 5 0 chr20 43759077 43759322 -22908683 + AluSg/x SINE Alu 88 333 0 1392 190 34 85 chr20 43759322 43759759 -22908246 - L1ME3 LINE L1 -78 6084 5670 2441 67 3 3 chr20 43759972 43760272 -22907733 - AluSg SINE Alu -10 300 1 456 250 83 0 chr20 43760586 43760730 -22907275 + L2 LINE L2 2927 3082 -231 11058 211 38 18 chr20 43760730 43761544 -22906461 - L1MB7 LINE L1 -199 5985 5189 1887 142 7 10 chr20 43761544 43761833 -22906172 - AluSx SINE Alu -24 288 1 11058 211 38 18 chr20 43761833 43763636 -22904369 - L1MB7 LINE L1 -995 5189 3424 1968 151 0 13 chr20 43763636 43763948 -22904057 - AluJb SINE Alu -4 308 1 11058 211 38 18 chr20 43763948 43764387 -22903618 - L1MB7 LINE L1 -2760 3424 2995 780 159 0 0 chr20 43764387 43764513 -22903492 - L1MA4A LINE L1 -5 6298 6173 11058 211 38 18 chr20 43764513 43764937 -22903068 - L1MB7 LINE L1 -3189 2995 2442 1897 142 62 21 chr20 43764937 43765276 -22902729 + MER46B DNA MER2_type 1 228 -8 7617 224 53 30 chr20 43765303 43765957 -22902048 - L1M4c LINE L1 -3873 2952 2314 2214 125 0 3 chr20 43765957 43766260 -22901745 + AluSx SINE Alu 1 302 -10 1678 195 0 3 chr20 43766260 43766541 -22901464 - AluJo SINE Alu -31 281 1 7617 224 53 30 chr20 43766541 43767635 -22900370 - L1M4c LINE L1 -4511 2314 1247 207 0 0 0 chr20 43767635 43767658 -22900347 + (TTG)n Simple_repeat Simple_repeat 2 24 0 7617 224 53 30 chr20 43767658 43768690 -22899315 - L1M4c LINE L1 -5578 1247 14 183 42 0 0 chr20 43768740 43768764 -22899241 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1947 150 0 17 chr20 43768767 43769054 -22898951 - AluSx SINE Alu -30 282 1 1790 207 26 21 chr20 43769077 43769417 -22898588 - MER90 LTR ERV1 0 614 270 1734 207 70 27 chr20 43769417 43769600 -22898405 + MLT1D LTR MaLR 1 175 -330 189 0 0 0 chr20 43769600 43769621 -22898384 + (TC)n Simple_repeat Simple_repeat 1 21 0 1734 207 70 27 chr20 43769621 43769921 -22898084 + MLT1D LTR MaLR 175 505 0 1790 207 26 21 chr20 43769921 43769967 -22898038 - MER90 LTR ERV1 -344 270 226 1725 178 121 14 chr20 43769981 43770346 -22897659 + MLT1C LTR MaLR 2 405 -62 2234 86 0 0 chr20 43770347 43770657 -22897348 - AluSq SINE Alu 0 326 17 995 193 11 6 chr20 43770662 43770838 -22897167 - MER90 LTR ERV1 -398 177 1 1540 164 13 56 chr20 43770917 43771075 -22896930 - AluJo SINE Alu -21 291 151 2505 75 0 3 chr20 43771075 43771382 -22896623 - AluY SINE Alu -5 306 1 1540 164 13 56 chr20 43771382 43771527 -22896478 - AluJo SINE Alu -161 151 1 1228 211 26 4 chr20 43771703 43771930 -22896075 + MLT1A1 LTR MaLR 1 232 -133 43916 33 21 2 chr20 43771930 43777960 -22890045 + L1PA2 LINE L1 2 6152 -3 863 161 35 0 chr20 43777997 43778140 -22889865 + MLT1A1 LTR MaLR 218 365 0 193 283 0 0 chr20 43778646 43778699 -22889306 - MIR SINE MIR -63 145 93 962 165 30 10 chr20 43778812 43779012 -22888993 - Charlie1b DNA MER1_type -1 522 319 312 113 0 0 chr20 43779089 43779142 -22888863 - L1MB4 LINE L1 -1 6179 6127 592 183 100 0 chr20 43779143 43779263 -22888742 - FLAM_C SINE Alu -6 137 6 3116 183 52 6 chr20 43779268 43779907 -22888098 - L1MB3 LINE L1 -40 6143 5476 1252 175 66 7 chr20 43779907 43780181 -22887824 - Charlie1b DNA MER1_type -162 361 72 2197 99 25 0 chr20 43780191 43780473 -22887532 - AluSx SINE Alu -23 289 1 281 229 72 0 chr20 43780501 43780584 -22887421 - L1MC5 LINE L1 -111 7850 7762 2155 144 3 0 chr20 43780799 43781111 -22886894 - AluSq SINE Alu 0 313 1 578 218 35 24 chr20 43781425 43781595 -22886410 - L3 LINE CR1 -30 1547 1376 253 308 65 19 chr20 43782571 43782678 -22885327 - MIR SINE MIR -149 113 2 669 173 45 15 chr20 43783031 43783164 -22884841 - LTR45 LTR ERV1 0 525 389 3226 142 19 18 chr20 43783928 43784472 -22883533 - L1MB2 LINE L1 -7 6164 5617 2728 86 5 24 chr20 43784472 43784843 -22883162 - THE1B LTR MaLR 0 364 1 3226 142 19 18 chr20 43784843 43784869 -22883136 - L1MB2 LINE L1 -554 5617 5593 2941 181 49 2 chr20 43785080 43785611 -22882394 + MER68 LTR ERV1 7 562 0 221 290 105 35 chr20 43785623 43785823 -22882182 - L2 LINE L2 -220 3052 2839 354 223 43 11 chr20 43786220 43786314 -22881691 + MIR SINE MIR 109 205 -57 2508 105 28 19 chr20 43786462 43786823 -22881182 - THE1B LTR MaLR 0 364 1 295 161 113 16 chr20 43787395 43787457 -22880548 + MIR SINE MIR 84 151 -111 186 308 0 0 chr20 43787700 43787752 -22880253 + MIR SINE MIR 73 124 -84 553 293 122 9 chr20 43787898 43788127 -22879878 + MIR SINE MIR 8 262 0 1511 219 119 21 chr20 43788150 43788529 -22879476 + MLT1G1 LTR MaLR 3 418 -177 1748 176 7 3 chr20 43788638 43788934 -22879071 + AluJb SINE Alu 1 297 -15 328 278 62 35 chr20 43789170 43789314 -22878691 + MIR3 SINE MIR 30 177 -31 317 317 30 10 chr20 43790269 43790413 -22877592 + MIR SINE MIR 104 250 -12 718 242 145 26 chr20 43790624 43790851 -22877154 + MIR SINE MIR 9 262 0 309 238 139 20 chr20 43791021 43791160 -22876845 - MIR SINE MIR -69 139 7 328 294 0 11 chr20 43791167 43791259 -22876746 - L2 LINE L2 -23 3249 3159 456 315 174 30 chr20 43791463 43791901 -22876104 + L3 LINE CR1 987 1487 -90 783 248 103 62 chr20 43791941 43792328 -22875677 + L2 LINE L2 2911 3313 0 422 234 8 0 chr20 43792328 43792456 -22875549 + (TGGA)n Simple_repeat Simple_repeat 2 130 0 393 246 61 9 chr20 43792829 43792943 -22875062 + MER5A DNA MER1_type 7 126 -63 247 250 36 12 chr20 43792875 43792959 -22875046 - MER5A DNA MER1_type -45 144 59 * 1988 133 0 37 chr20 43793030 43793353 -22874652 + AluSx SINE Alu 1 311 -1 368 279 19 0 chr20 43793354 43793458 -22874547 - MIR SINE MIR -73 135 30 304 272 72 24 chr20 43793806 43793931 -22874074 - MIR SINE MIR -20 242 112 1588 168 0 31 chr20 43794047 43794372 -22873633 - AluJo SINE Alu 0 316 1 536 139 0 0 chr20 43794646 43794725 -22873280 - L2 LINE L2 0 3313 3235 2562 112 67 17 chr20 43794770 43795188 -22872817 - Tigger2 DNA MER2_type -2 2716 2278 403 188 0 0 chr20 43795183 43795252 -22872753 - Tigger2 DNA MER2_type -2649 69 1 * 209 234 47 47 chr20 43795313 43795441 -22872564 - L2 LINE L2 -247 3066 2939 217 305 17 0 chr20 43795886 43795945 -22872060 - MIR SINE MIR -61 147 88 208 77 0 51 chr20 43796253 43796292 -22871713 + (GGGTG)n Simple_repeat Simple_repeat 3 39 0 182 226 60 71 chr20 43796475 43796559 -22871446 + MIR SINE MIR 31 113 -95 805 251 20 0 chr20 43797574 43797769 -22870236 + MIR SINE MIR 64 262 0 649 279 111 24 chr20 43797800 43798372 -22869633 - L2 LINE L2 -217 3055 2415 181 188 0 0 chr20 43798398 43798430 -22869575 + MIR SINE MIR 106 137 -71 189 312 75 32 chr20 43798593 43798686 -22869319 + MIR SINE MIR 110 206 -56 1789 132 56 0 chr20 43798768 43798937 -22869068 - AluSx SINE Alu -9 303 110 192 40 0 0 chr20 43798937 43798962 -22869043 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 1789 132 56 0 chr20 43798962 43799079 -22868926 - AluSx SINE Alu -202 110 1 926 151 74 128 chr20 43799261 43799598 -22868407 - MER33 DNA MER1_type -4 320 2 365 187 13 0 chr20 43799599 43799674 -22868331 - MIR3 SINE MIR -39 169 94 691 258 45 25 chr20 43800452 43800650 -22867355 - MIR SINE MIR -31 231 30 1054 251 332 27 chr20 43800945 43802027 -22865978 - L2 LINE L2 -4 3309 1889 1469 227 113 34 chr20 43802081 43802548 -22865457 + MLT1D LTR MaLR 1 504 -1 1211 249 98 46 chr20 43802775 43803236 -22864769 + L2 LINE L2 2829 3313 0 261 0 0 0 chr20 43803267 43803296 -22864709 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1199 147 0 0 chr20 43803296 43803469 -22864536 + AluSg/x SINE Alu 129 304 -8 307 234 0 64 chr20 43803469 43803563 -22864442 - L2 LINE L2 -1234 2080 1993 270 350 62 45 chr20 43804470 43804779 -22863226 - L1MC/D LINE L1 -1915 5893 5580 2302 66 0 17 chr20 43804932 43805233 -22862772 - AluY SINE Alu -15 296 1 942 123 0 0 chr20 43805237 43805367 -22862638 - FLAM_C SINE Alu -2 131 2 292 233 17 0 chr20 43805585 43805645 -22862360 - MIR SINE MIR -63 145 85 209 297 55 69 chr20 43805712 43805857 -22862148 + MIR3 SINE MIR 18 160 -48 2153 123 0 7 chr20 43806078 43806387 -22861618 - AluSx SINE Alu -5 307 1 2216 103 0 0 chr20 43806420 43806722 -22861283 - AluSx SINE Alu -10 302 1 1811 206 19 12 chr20 43806855 43807273 -22860732 - Charlie4a DNA MER1_type -51 457 37 226 150 190 40 chr20 43807744 43807844 -22860161 - L1ME4a LINE L1 -10 6111 5997 2142 93 40 0 chr20 43807957 43808257 -22859748 - AluSx SINE Alu 0 312 1 206 322 98 46 chr20 43808264 43808438 -22859567 + L2 LINE L2 3129 3311 -2 3445 251 73 91 chr20 43808906 43809386 -22858619 - L1MC4 LINE L1 -4 8038 7551 2799 10 0 0 chr20 43809386 43809699 -22858306 - AluYb8 SINE Alu -5 313 1 3445 251 73 91 chr20 43809699 43809928 -22858077 - L1MC4 LINE L1 -491 7551 7319 2030 99 7 3 chr20 43809928 43810239 -22857766 - AluSq SINE Alu 0 312 1 3445 251 73 91 chr20 43810239 43810571 -22857434 - L1MC4 LINE L1 -723 7319 6983 320 137 0 0 chr20 43810571 43810622 -22857383 + Alu SINE Alu 249 299 -3 1595 174 3 7 chr20 43810623 43810910 -22857095 + AluJb SINE Alu 3 288 -24 3445 251 73 91 chr20 43810910 43811274 -22856731 - L1MC4 LINE L1 -1059 6983 6607 210 71 0 0 chr20 43811274 43811302 -22856703 + (CA)n Simple_repeat Simple_repeat 2 29 0 3445 251 73 91 chr20 43811302 43811447 -22856558 - L1MC4 LINE L1 -1435 6607 6461 435 267 119 50 chr20 43811706 43811756 -22856249 - L1MC/D LINE L1 -2339 5469 5424 2001 141 0 0 chr20 43811756 43812053 -22855952 - AluSx SINE Alu -15 297 1 435 267 119 50 chr20 43812053 43812204 -22855801 - L1MC/D LINE L1 -2384 5424 5254 1958 143 0 0 chr20 43812461 43812754 -22855251 - AluSx SINE Alu -19 293 1 269 304 57 52 chr20 43812805 43813265 -22854740 - L1MC/D LINE L1 -1278 4868 4407 189 0 0 0 chr20 43813270 43813291 -22854714 + (T)n Simple_repeat Simple_repeat 1 21 0 591 294 15 2 chr20 43813380 43813583 -22854422 + MIR SINE MIR 12 262 0 23 0 0 0 chr20 43813739 43813762 -22854243 + AT_rich Low_complexity Low_complexity 1 23 0 836 167 0 0 chr20 43813791 43813923 -22854082 - FLAM_C SINE Alu -1 132 1 355 338 5 23 chr20 43814115 43814334 -22853671 - L1MC/D LINE L1 -2193 3953 3739 468 203 56 28 chr20 43814469 43814612 -22853393 - L1ME1 LINE L1 -3 6163 6017 329 236 14 21 chr20 43814626 43814900 -22853105 + GA-rich Low_complexity Low_complexity 1 272 0 600 262 65 58 chr20 43815444 43815753 -22852252 - L1MC/D LINE L1 -3540 2606 2296 270 229 11 158 chr20 43816055 43816172 -22851833 - HAL1b LINE L1 -538 810 677 1613 199 0 0 chr20 43816172 43816468 -22851537 - AluJb SINE Alu -16 296 1 270 229 11 158 chr20 43816468 43816569 -22851436 - HAL1b LINE L1 -671 677 641 2209 107 3 0 chr20 43816569 43816878 -22851127 - AluSp SINE Alu -3 310 1 270 229 11 158 chr20 43816878 43816942 -22851063 - HAL1b LINE L1 -707 641 569 * 493 201 57 30 chr20 43816937 43817073 -22850932 + L1MA9 LINE L1 6134 6274 -25 465 298 16 56 chr20 43817138 43817460 -22850545 - HAL1b LINE L1 -835 513 205 2439 53 0 3 chr20 43817840 43818140 -22849865 - AluY SINE Alu -12 299 1 817 208 0 0 chr20 43818148 43818297 -22849708 - MLT1A1 LTR MaLR -215 150 2 236 228 59 30 chr20 43818507 43818608 -22849397 - MIR SINE MIR -26 236 133 26 0 0 0 chr20 43818842 43818868 -22849137 + AT_rich Low_complexity Low_complexity 1 26 0 263 257 95 7 chr20 43819094 43819208 -22848797 + MIR SINE MIR 78 197 -11 295 247 41 0 chr20 43819252 43819325 -22848680 + MIR SINE MIR 65 140 -68 2297 89 0 0 chr20 43819350 43819653 -22848352 - AluSx SINE Alu -9 303 1 645 14 0 0 chr20 43820093 43820167 -22847838 + (TTCC)n Simple_repeat Simple_repeat 4 77 0 1426 184 31 0 chr20 43820167 43820428 -22847577 - AluJo SINE Alu -40 272 4 2227 59 42 3 chr20 43820625 43820913 -22847092 - AluY SINE Alu -12 299 1 281 277 36 12 chr20 43821089 43821172 -22846833 + MIR SINE MIR 48 132 -76 402 258 242 26 chr20 43821244 43821434 -22846571 + MIR SINE MIR 24 254 -8 554 220 0 63 chr20 43822019 43822072 -22845933 - L1ME1 LINE L1 -1 6333 6278 1854 133 10 10 chr20 43822072 43822205 -22845800 + AluSx SINE Alu 1 133 -179 378 0 0 0 chr20 43822205 43822247 -22845758 + (TAA)n Simple_repeat Simple_repeat 2 43 0 1854 133 10 10 chr20 43822247 43822414 -22845591 + AluSx SINE Alu 132 301 -11 554 220 0 63 chr20 43822414 43822521 -22845484 - L1ME1 LINE L1 -56 6278 6032 741 287 106 18 chr20 43822916 43823719 -22844286 - L1ME1 LINE L1 -257 5907 5035 364 221 142 39 chr20 43823728 43823855 -22844150 - MIR SINE MIR -110 152 13 390 303 141 7 chr20 43824298 43824440 -22843565 - MIR SINE MIR -79 183 23 2171 91 0 0 chr20 43824619 43824950 -22843055 - AluSp SINE Alu 0 331 1 358 267 33 0 chr20 43825144 43825234 -22842771 + MIR SINE MIR 100 192 -70 808 282 11 7 chr20 43825324 43825549 -22842456 + MIR SINE MIR 1 221 -41 1163 163 134 97 chr20 43825552 43825658 -22842347 + MLT1B LTR MaLR 3 104 -407 2196 131 40 0 chr20 43825658 43826008 -22841997 + THE1B LTR MaLR 1 364 0 1163 163 134 97 chr20 43826008 43826341 -22841664 + MLT1B LTR MaLR 104 509 -2 31 26 0 0 chr20 43826360 43826398 -22841607 + AT_rich Low_complexity Low_complexity 1 38 0 498 217 78 0 chr20 43826777 43826906 -22841099 - L2 LINE L2 -1849 1465 1327 647 199 15 0 chr20 43826920 43827051 -22840954 - LTR16C LTR ERVL 0 491 359 572 172 0 0 chr20 43827427 43827520 -22840485 - AluSx SINE Alu -156 156 64 182 222 0 99 chr20 43827526 43827607 -22840398 - MIR SINE MIR -69 139 67 893 262 143 35 chr20 43827671 43828155 -22839850 - L1ME4a LINE L1 -13 6108 5573 273 319 83 0 chr20 43828217 43828361 -22839644 - L1MC/D LINE L1 -2109 5699 5544 41808 61 7 3 chr20 43828588 43834739 -22833266 - L1PA5 LINE L1 0 6154 11 686 298 105 88 chr20 43834743 43835171 -22832834 - L1MC/D LINE L1 -1823 4323 3904 2071 109 0 0 chr20 43835171 43835455 -22832550 + AluSx SINE Alu 14 297 -15 686 298 105 88 chr20 43835455 43836035 -22831970 - L1MC/D LINE L1 -2242 3904 3298 310 297 8 59 chr20 43836318 43836436 -22831569 - HAL1b LINE L1 -535 813 702 253 254 107 71 chr20 43836505 43836729 -22831276 - HAL1b LINE L1 -731 617 386 2117 125 0 3 chr20 43836853 43837166 -22830839 - AluSx SINE Alu 0 312 1 423 249 84 52 chr20 43837883 43838096 -22829909 + L1MC/D LINE L1 5304 5523 -2285 307 234 16 16 chr20 43838664 43838728 -22829277 - MER5B DNA MER1_type 0 178 115 310 235 49 82 chr20 43838786 43838969 -22829036 + L1MC4 LINE L1 7865 8041 -1 335 298 74 16 chr20 43838976 43839097 -22828908 - MER5B DNA MER1_type -48 130 3 858 319 70 71 chr20 43839469 43840057 -22827948 + L1MEd LINE L1 1093 1775 -1126 1836 156 3 3 chr20 43840057 43840352 -22827653 + AluJb SINE Alu 1 295 -17 858 319 70 71 chr20 43840352 43840472 -22827533 + L1MEd LINE L1 1775 1894 -1007 797 270 93 66 chr20 43840622 43841166 -22826839 + L1MEd LINE L1 2445 2991 -3549 2856 225 46 42 chr20 43841171 43841407 -22826598 - HAL1 LINE L1 -1063 1444 1211 221 0 35 0 chr20 43841407 43841436 -22826569 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2856 225 46 42 chr20 43841436 43841715 -22826290 - HAL1 LINE L1 -1296 1211 935 1506 195 112 66 chr20 43841715 43842198 -22825807 - MLT1D LTR MaLR 0 505 1 2856 225 46 42 chr20 43842198 43842548 -22825457 - HAL1 LINE L1 -1572 935 574 1066 269 91 26 chr20 43842644 43843030 -22824975 - HAL1 LINE L1 -2095 412 2 348 118 0 0 chr20 43843210 43843261 -22824744 + MADE1 DNA Mariner 30 80 0 216 67 0 0 chr20 43843402 43843432 -22824573 + (CA)n Simple_repeat Simple_repeat 1 30 0 27 29 0 0 chr20 43843824 43843858 -22824147 + AT_rich Low_complexity Low_complexity 1 34 0 2114 102 0 3 chr20 43844426 43844719 -22823286 + AluSx SINE Alu 1 292 -20 467 63 16 0 chr20 43844866 43844929 -22823076 + MSTB2 LTR MaLR 394 457 0 585 250 6 76 chr20 43845150 43845322 -22822683 + L2 LINE L2 2194 2353 -961 1577 130 8 16 chr20 43845323 43845576 -22822429 + MSTB2 LTR MaLR 207 457 0 323 289 105 32 chr20 43845577 43845767 -22822238 + L2 LINE L2 2968 3171 -142 411 228 114 36 chr20 43845840 43846007 -22821998 + L2 LINE L2 3133 3312 -1 4045 195 64 43 chr20 43846421 43847257 -22820748 + L1M4 LINE L1 749 1565 -5081 2126 81 24 17 chr20 43847257 43847382 -22820623 + AluY SINE Alu 1 124 -187 216 0 0 0 chr20 43847382 43847406 -22820599 + (CAAAA)n Simple_repeat Simple_repeat 5 28 0 2126 81 24 17 chr20 43847406 43847577 -22820428 + AluY SINE Alu 124 299 -12 4045 195 64 43 chr20 43847577 43848548 -22819457 + L1M4 LINE L1 1565 2649 -3997 5085 141 20 43 chr20 43848559 43848847 -22819158 + L1MB7 LINE L1 5149 5442 -742 2375 74 0 0 chr20 43848847 43849146 -22818859 + AluY SINE Alu 1 299 -12 5085 141 20 43 chr20 43849146 43849169 -22818836 + L1MB7 LINE L1 5442 5464 -720 1055 191 0 0 chr20 43849169 43849342 -22818663 - FAM SINE Alu -2 173 1 5085 141 20 43 chr20 43849342 43850066 -22817939 + L1MB7 LINE L1 5464 6165 -19 362 55 0 8 chr20 43850192 43850248 -22817757 - MLT2B2 LTR ERVL 0 515 467 234 301 14 0 chr20 43850636 43850709 -22817296 + L2 LINE L2 2709 2782 -532 524 269 48 43 chr20 43850862 43851070 -22816935 + MIR SINE MIR 7 215 -47 309 331 14 69 chr20 43851775 43851920 -22816085 + MER5B DNA MER1_type 42 178 0 208 318 182 0 chr20 43852381 43852469 -22815536 + MER5A DNA MER1_type 86 189 0 419 276 62 28 chr20 43852618 43852763 -22815242 + MIR SINE MIR 14 163 -99 193 328 107 30 chr20 43852871 43853002 -22815003 + MER5B DNA MER1_type 18 158 -20 1653 157 13 35 chr20 43853023 43853231 -22814774 - AluJb SINE Alu -1 311 111 2679 107 0 0 chr20 43853231 43853586 -22814419 + THE1A LTR MaLR 1 355 0 1653 157 13 35 chr20 43853586 43853695 -22814310 - AluJb SINE Alu -201 111 1 1079 319 40 5 chr20 43853912 43854317 -22813688 + L2 LINE L2 2203 2621 -693 2458 57 0 0 chr20 43854342 43854639 -22813366 - AluSc SINE Alu -12 297 1 2125 120 3 0 chr20 43854639 43854947 -22813058 - AluSx SINE Alu -3 309 1 2197 92 3 0 chr20 43855154 43855449 -22812556 + AluSc SINE Alu 5 300 -9 443 224 35 98 chr20 43855492 43855544 -22812461 - L2 LINE L2 -1162 2152 2098 1857 108 36 39 chr20 43855544 43855849 -22812156 + AluSx SINE Alu 1 304 -8 443 224 35 98 chr20 43855849 43855970 -22812035 - L2 LINE L2 -1216 2098 1990 22 0 0 0 chr20 43856433 43856455 -22811550 + AT_rich Low_complexity Low_complexity 1 22 0 313 278 66 86 chr20 43856513 43856711 -22811294 + HAL1 LINE L1 885 1078 -1429 223 226 113 0 chr20 43857425 43857487 -22810518 - L2 LINE L2 -1 3312 3244 210 241 35 0 chr20 43857648 43857706 -22810299 - L2 LINE L2 -19 3253 3194 279 0 0 0 chr20 43857854 43857885 -22810120 + (A)n Simple_repeat Simple_repeat 1 31 0 371 213 99 42 chr20 43858337 43858508 -22809497 + MIR3 SINE MIR 15 168 -40 580 251 19 37 chr20 43858770 43859074 -22808931 + MLT1J2 LTR MaLR 62 442 -8 218 289 105 44 chr20 43859196 43859310 -22808695 - L2 LINE L2 -2 3270 3150 2320 122 0 20 chr20 43859456 43859800 -22808205 + MER1B DNA MER1_type 1 337 0 400 263 147 0 chr20 43860294 43860389 -22807616 - MER91A DNA MER1_type -87 109 1 350 192 64 0 chr20 43860932 43861010 -22806995 - L2 LINE L2 0 3313 3231 610 267 36 0 chr20 43863025 43863190 -22804815 - L1ME2 LINE L1 -1 6163 5993 563 233 176 17 chr20 43863367 43863543 -22804462 + MIR SINE MIR 48 251 -11 184 200 0 29 chr20 43863513 43863548 -22804457 + L2 LINE L2 3267 3300 -13 * 247 371 97 6 chr20 43864129 43864304 -22803701 + L2 LINE L2 2972 3162 -110 22 35 0 0 chr20 43864353 43864382 -22803623 + AT_rich Low_complexity Low_complexity 1 29 0 296 272 61 70 chr20 43864683 43864911 -22803094 + L1P LINE L1 3550 3775 -2371 940 146 19 6 chr20 43864912 43865070 -22802935 + AluJo SINE Alu 122 281 -31 906 288 19 37 chr20 43865114 43865628 -22802377 + L1M4 LINE L1 3806 4310 -1836 601 264 96 12 chr20 43865795 43865962 -22802043 + MIR SINE MIR 2 182 -80 1409 244 65 11 chr20 43866277 43866659 -22801346 + LTR16C LTR ERVL 89 491 0 411 106 0 0 chr20 43866874 43866940 -22801065 + (TG)n Simple_repeat Simple_repeat 2 67 0 184 347 56 0 chr20 43866984 43867056 -22800949 - L2 LINE L2 -40 3232 3157 682 238 14 7 chr20 43867261 43867404 -22800601 - MLT1I LTR MaLR -233 176 33 2956 154 27 32 chr20 43867578 43867593 -22800412 + MER74A LTR ERVL 1 15 -543 2634 29 0 0 chr20 43867593 43867901 -22800104 - AluY SINE Alu -3 308 1 2956 154 27 32 chr20 43867901 43868445 -22799560 + MER74A LTR ERVL 15 557 -1 288 242 165 11 chr20 43869000 43869134 -22798871 + MIR SINE MIR 39 143 -65 1766 106 0 0 chr20 43869174 43869420 -22798585 + AluSc SINE Alu 58 303 -6 987 250 22 38 chr20 43869442 43869762 -22798243 + L1M4 LINE L1 4012 4326 -1820 1018 266 76 40 chr20 43869769 43870307 -22797698 - MLT1F1 LTR MaLR 0 590 2 1324 252 47 77 chr20 43870309 43870945 -22797060 + L1M4 LINE L1 4336 4952 -1194 22 35 0 0 chr20 43872093 43872122 -22795883 + GC_rich Low_complexity Low_complexity 1 29 0 32 0 0 0 chr20 43872143 43872175 -22795830 + GC_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr20 43872214 43872235 -22795770 + (CGGGGG)n Simple_repeat Simple_repeat 3 23 0 24 0 0 0 chr20 43872249 43872273 -22795732 + GC_rich Low_complexity Low_complexity 1 24 0 180 0 0 0 chr20 43872333 43872353 -22795652 + (CCG)n Simple_repeat Simple_repeat 3 22 0 31 44 0 0 chr20 43872382 43872427 -22795578 + GC_rich Low_complexity Low_complexity 1 45 0 31 26 0 0 chr20 43872462 43872500 -22795505 + GC_rich Low_complexity Low_complexity 1 38 0 386 245 80 31 chr20 43875398 43875526 -22792479 - MIR SINE MIR -59 149 33 1321 184 91 131 chr20 43875778 43875877 -22792128 - L1ME2 LINE L1 0 6164 6063 252 150 0 0 chr20 43875877 43875917 -22792088 - MER3 DNA MER1_type -154 55 16 1321 184 91 131 chr20 43875917 43876320 -22791685 - L1ME2 LINE L1 -101 6063 5648 205 247 151 0 chr20 43876338 43876411 -22791594 + MIR SINE MIR 149 232 -30 672 282 25 43 chr20 43876641 43876918 -22791087 - L2 LINE L2 0 3313 3042 700 161 28 74 chr20 43876931 43876976 -22791029 - MER5A DNA MER1_type -1 188 142 3336 85 0 5 chr20 43876976 43877423 -22790582 - L1PA10 LINE L1 0 6168 5724 700 161 28 74 chr20 43877423 43877572 -22790433 - MER5A DNA MER1_type -47 142 4 263 246 66 0 chr20 43877628 43877689 -22790316 + L2 LINE L2 3207 3271 -1 247 321 19 22 chr20 43878121 43878282 -22789723 + MIR SINE MIR 57 216 -46 442 149 149 32 chr20 43878367 43878461 -22789544 + L2 LINE L2 3168 3272 0 494 276 123 6 chr20 43878824 43878994 -22789011 + MIR SINE MIR 25 214 -48 909 206 0 0 chr20 43879116 43879291 -22788714 - FRAM SINE Alu -1 175 1 378 303 37 48 chr20 43879464 43879652 -22788353 + MIR SINE MIR 21 206 -56 896 156 36 18 chr20 43879673 43879840 -22788165 - MER20 DNA MER1_type -4 215 46 192 238 0 0 chr20 43880290 43880332 -22787673 - L2 LINE L2 -9 3304 3263 754 216 57 0 chr20 43880854 43881030 -22786975 - MER5A DNA MER1_type -3 186 1 329 257 76 52 chr20 43882413 43882701 -22785304 - HAL1 LINE L1 -1374 1133 839 251 271 98 45 chr20 43883250 43883383 -22784622 - MIR SINE MIR -75 187 48 378 210 74 0 chr20 43883843 43883924 -22784081 + MIR SINE MIR 45 131 -131 477 0 0 0 chr20 43884927 43884980 -22783025 + (CA)n Simple_repeat Simple_repeat 2 54 0 206 179 0 26 chr20 43884992 43885031 -22782974 + MIR SINE MIR 31 68 -194 1091 77 11 27 chr20 43885058 43885241 -22782764 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 198 143 0 0 chr20 43885241 43885276 -22782729 + (TCCC)n Simple_repeat Simple_repeat 3 37 0 782 303 66 34 chr20 43885276 43885655 -22782350 - L2 LINE L2 0 3272 2882 240 259 191 8 chr20 43885660 43885791 -22782214 + MIR SINE MIR 91 245 -17 2022 106 9 81 chr20 43886321 43886669 -22781336 + AluSx SINE Alu 1 299 -13 786 295 50 86 chr20 43886700 43887170 -22780835 + L2 LINE L2 2682 3132 -181 2384 105 0 0 chr20 43887170 43887476 -22780529 - AluSg SINE Alu -4 306 1 786 295 50 86 chr20 43887476 43887652 -22780353 + L2 LINE L2 3132 3313 0 1924 146 14 0 chr20 43888604 43888898 -22779107 - AluJb SINE Alu -9 303 6 194 309 0 0 chr20 43888908 43888963 -22779042 + L2 LINE L2 2998 3052 -220 303 286 16 16 chr20 43889126 43889252 -22778753 - L2 LINE L2 -608 2706 2581 798 183 65 11 chr20 43889253 43889439 -22778566 - MER3 DNA MER1_type -4 205 10 340 331 66 13 chr20 43889582 43889733 -22778272 - L1ME LINE L1 -483 5638 5480 313 100 183 0 chr20 43890671 43890731 -22777274 - MLT1A1 LTR MaLR -294 71 1 469 175 252 7 chr20 43890849 43890992 -22777013 - MER5A DNA MER1_type -8 181 4 444 245 63 36 chr20 43890999 43891335 -22776670 - LTR16A1 LTR ERVL 0 457 20 288 0 0 0 chr20 43891605 43891637 -22776368 + (GA)n Simple_repeat Simple_repeat 1 32 0 200 294 47 0 chr20 43891686 43891771 -22776234 - L2 LINE L2 -219 3053 2965 320 286 181 6 chr20 43891804 43891965 -22776040 - MIR SINE MIR -52 210 19 375 73 0 0 chr20 43892255 43892310 -22775695 + (TG)n Simple_repeat Simple_repeat 2 56 0 755 258 46 58 chr20 43892924 43893113 -22774892 - MIR SINE MIR -6 256 69 2471 93 0 3 chr20 43893113 43893424 -22774581 + AluSq SINE Alu 2 311 -2 755 258 46 58 chr20 43893424 43893474 -22774531 - MIR SINE MIR -193 69 20 842 246 79 92 chr20 43893829 43894374 -22773631 - MLT1H LTR MaLR 0 549 12 262 334 195 3 chr20 43894393 43894701 -22773304 - L2 LINE L2 -5 3267 2901 230 305 34 51 chr20 43895362 43895480 -22772525 + MIR SINE MIR 25 140 -68 245 282 16 0 chr20 43896104 43896178 -22771827 - MIR SINE MIR -109 99 43 262 274 16 0 chr20 43896541 43896603 -22771402 + MIR SINE MIR 91 153 -55 725 237 38 5 chr20 43896613 43896799 -22771206 + MIR SINE MIR 1 192 -70 360 267 155 27 chr20 43897122 43897309 -22770696 + MIR SINE MIR 37 247 -15 1751 165 3 36 chr20 43897688 43897991 -22770014 - AluJo SINE Alu -18 294 2 2326 110 0 10 chr20 43898792 43899101 -22768904 - AluSq SINE Alu -7 306 1 257 184 214 39 chr20 43899497 43899600 -22768405 + MIR SINE MIR 97 217 -45 462 184 132 15 chr20 43899680 43899816 -22768189 - MIR SINE MIR -84 178 27 1992 143 0 26 chr20 43899876 43900184 -22767821 + AluJo SINE Alu 13 312 0 408 233 87 12 chr20 43901287 43901458 -22766547 - L1P3 LINE L1 -351 5821 5643 540 328 26 38 chr20 43901636 43901977 -22766028 - L2 LINE L2 -19 3253 2917 445 193 202 8 chr20 43902280 43902399 -22765606 - MIR SINE MIR -101 161 20 372 313 92 18 chr20 43902574 43902737 -22765268 - L1ME4a LINE L1 0 6121 5947 447 309 97 12 chr20 43902821 43903080 -22764925 - L1ME4a LINE L1 -321 5800 5520 243 0 0 0 chr20 43903764 43903791 -22764214 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 189 305 0 34 chr20 43904610 43904669 -22763336 - MIR SINE MIR -16 246 190 * 320 259 126 22 chr20 43904636 43904771 -22763234 + MIR SINE MIR 32 180 -82 371 248 205 31 chr20 43905409 43905570 -22762435 + MIR SINE MIR 22 210 -52 258 247 11 43 chr20 43905725 43905818 -22762187 + MIR SINE MIR 43 132 -76 229 305 9 38 chr20 43906319 43906424 -22761581 + MIR SINE MIR 20 121 -87 562 289 158 9 chr20 43906589 43906911 -22761094 + L2 LINE L2 2372 2741 -573 212 297 99 22 chr20 43907412 43907503 -22760502 + MIR SINE MIR 18 115 -147 1055 282 82 13 chr20 43907924 43908378 -22759627 + L2 LINE L2 2817 3301 -12 568 259 102 42 chr20 43908631 43908762 -22759243 + MIR SINE MIR 13 135 -127 2266 101 3 7 chr20 43908762 43909060 -22758945 + AluSq SINE Alu 1 297 -16 568 259 102 42 chr20 43909060 43909164 -22758841 + MIR SINE MIR 135 262 0 1630 153 16 66 chr20 43909176 43909356 -22758649 - AluJo SINE Alu -8 304 117 219 36 0 0 chr20 43909356 43909384 -22758621 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 2151 92 0 25 chr20 43909384 43909668 -22758337 - AluSc SINE Alu -31 278 2 1630 153 16 66 chr20 43909668 43909806 -22758199 - AluJo SINE Alu -193 119 1 848 276 63 45 chr20 43909828 43910209 -22757796 - MLT1I LTR MaLR -21 388 1 2180 178 69 13 chr20 43910286 43910764 -22757241 + MLT1D LTR MaLR 1 505 0 253 307 62 62 chr20 43911039 43911296 -22756709 - L2 LINE L2 -352 2962 2706 465 292 133 38 chr20 43911454 43911996 -22756009 + L2 LINE L2 2657 3252 -20 492 213 28 0 chr20 43912275 43912383 -22755622 + MIR SINE MIR 38 148 -114 1084 234 94 7 chr20 43912437 43912736 -22755269 + MER46C DNA MER2_type 14 338 0 326 286 133 76 chr20 43913472 43913745 -22754260 + L2 LINE L2 2886 3181 -91 2326 105 7 13 chr20 43913745 43914050 -22753955 + AluSx SINE Alu 3 305 -7 326 286 133 76 chr20 43914050 43914091 -22753914 + L2 LINE L2 3181 3218 -54 442 321 92 52 chr20 43914306 43914808 -22753197 - L1 LINE L1 -755 5391 4878 427 332 142 5 chr20 43914823 43915034 -22752971 + MIR SINE MIR 3 242 -20 824 149 19 39 chr20 43915055 43915145 -22752860 - MLT1B LTR MaLR -46 344 257 1896 137 156 5 chr20 43915145 43915517 -22752488 - MSTA LTR MaLR 0 428 1 824 149 19 39 chr20 43915517 43915580 -22752425 - MLT1B LTR MaLR -133 257 194 355 250 26 17 chr20 43916655 43916771 -22751234 - MIR SINE MIR -67 141 25 796 313 20 0 chr20 43917398 43917644 -22750361 + MIR SINE MIR 3 253 -9 767 264 77 54 chr20 43917681 43918096 -22749909 + LTR16A LTR ERVL 3 427 -23 323 315 23 23 chr20 43918327 43918457 -22749548 - MIR3 SINE MIR -2 206 77 200 284 74 12 chr20 43918947 43919028 -22748977 + L2 LINE L2 3187 3272 0 327 173 123 25 chr20 43920012 43920093 -22747912 + L2 LINE L2 3225 3313 0 1362 181 20 69 chr20 43920260 43920609 -22747396 - MER33 DNA MER1_type 0 324 1 290 298 11 2 chr20 43920973 43921076 -22746929 + MIR SINE MIR 23 125 -83 215 289 103 0 chr20 43921355 43921452 -22746553 + MIR SINE MIR 119 225 -37 * 583 252 143 17 chr20 43921434 43921664 -22746341 - MIR SINE MIR -3 259 1 261 353 70 11 chr20 43922114 43922301 -22745704 + MIR SINE MIR 45 242 -20 372 271 66 25 chr20 43922866 43922988 -22745017 + L2 LINE L2 3141 3267 -5 289 323 121 0 chr20 43923234 43923482 -22744523 - L2 LINE L2 -1727 1587 1310 290 264 150 93 chr20 43923483 43923729 -22744276 - MIR SINE MIR -1 261 2 2240 112 14 0 chr20 43923945 43924239 -22743766 + AluSx SINE Alu 2 299 -13 208 332 127 27 chr20 43924542 43924873 -22743132 - L2 LINE L2 -800 2514 2151 213 262 0 48 chr20 43924898 43925001 -22743004 + (CCCA)n Simple_repeat Simple_repeat 3 100 0 200 182 0 45 chr20 43925074 43925162 -22742843 + (TCCA)n Simple_repeat Simple_repeat 3 86 0 1000 91 7 0 chr20 43925295 43925438 -22742567 + L1MA2 LINE L1 6126 6269 -35 358 65 0 169 chr20 43925444 43925521 -22742484 + MER33 DNA MER1_type 260 323 -1 370 226 25 6 chr20 43925537 43925696 -22742309 + (TCCA)n Simple_repeat Simple_repeat 1 162 0 284 192 0 0 chr20 43925769 43925821 -22742184 - MIR SINE MIR -130 132 81 228 345 26 18 chr20 43927507 43927620 -22740385 - L2 LINE L2 -17 3255 3142 443 281 85 0 chr20 43927650 43927814 -22740191 + MIR SINE MIR 54 231 -31 196 175 0 0 chr20 43927812 43927852 -22740153 - L2 LINE L2 0 3313 3274 * 246 320 226 6 chr20 43928219 43928400 -22739605 - L2 LINE L2 -52 3220 3000 661 254 12 63 chr20 43928614 43928866 -22739139 - L2 LINE L2 0 3313 3075 846 292 103 11 chr20 43928936 43929313 -22738692 + L1MC4a LINE L1 5502 5913 -1895 306 220 203 17 chr20 43929372 43929490 -22738515 + HAL1 LINE L1 2367 2506 -1 1249 257 31 40 chr20 43929517 43929969 -22738036 + LTR16A1 LTR ERVL 10 457 0 249 276 78 52 chr20 43930018 43930134 -22737871 - MIR SINE MIR -61 201 83 268 323 0 11 chr20 43930495 43930588 -22737417 - L3 LINE CR1 -115 1462 1371 414 324 7 27 chr20 43932856 43933004 -22735001 - MIR SINE MIR -66 196 52 422 319 30 75 chr20 43933035 43933367 -22734638 + L2 LINE L2 2995 3311 -2 232 326 76 0 chr20 43933371 43933463 -22734542 + MIR3 SINE MIR 99 197 -11 1795 224 100 25 chr20 43933596 43934062 -22733943 - MLT1H LTR MaLR 0 549 1 273 57 0 0 chr20 43934251 43934286 -22733719 + (CA)n Simple_repeat Simple_repeat 1 35 0 214 274 39 0 chr20 43934468 43934519 -22733486 - L2 LINE L2 -1 3271 3219 2143 102 7 27 chr20 43934586 43934879 -22733126 - AluSx SINE Alu -25 287 1 259 291 90 26 chr20 43935381 43935545 -22732460 + MIR SINE MIR 15 192 -70 356 155 17 0 chr20 43935599 43935657 -22732348 + LTR16A1 LTR ERVL 63 121 -336 534 245 71 33 chr20 43935728 43935912 -22732093 + LTR16A1 LTR ERVL 265 455 -2 251 343 44 7 chr20 43936010 43936147 -22731858 + L2 LINE L2 2914 3055 -217 315 0 0 0 chr20 43936232 43936267 -22731738 + (TG)n Simple_repeat Simple_repeat 2 36 0 1222 303 133 12 chr20 43936327 43936928 -22731077 - L2 LINE L2 -657 2657 1984 6732 96 36 3 chr20 43936996 43938122 -22729883 + L1MA2 LINE L1 5138 6304 0 30 59 0 0 chr20 43938284 43938335 -22729670 + AT_rich Low_complexity Low_complexity 1 51 0 402 208 9 19 chr20 43938470 43938576 -22729429 + L1MC/D LINE L1 5303 5407 -2401 733 262 122 7 chr20 43938580 43938851 -22729154 + L1MC/D LINE L1 5435 5736 -2072 360 341 100 39 chr20 43939075 43939743 -22728262 - L2 LINE L2 -1269 2045 1337 284 248 213 7 chr20 43941045 43941186 -22726819 + MIR3 SINE MIR 37 206 -2 * 518 247 14 10 chr20 43941181 43941339 -22726666 - MIR SINE MIR -1 261 104 359 252 68 7 chr20 43942559 43942706 -22725299 + MIR3 SINE MIR 33 188 -20 204 250 96 67 chr20 43942892 43942996 -22725009 - L2 LINE L2 -1804 1510 1404 * 267 319 151 12 chr20 43942914 43943080 -22724925 + MIR SINE MIR 48 236 -26 196 162 27 0 chr20 43943095 43943132 -22724873 - MIR SINE MIR -102 160 123 321 26 0 0 chr20 43943725 43943763 -22724242 + (TATG)n Simple_repeat Simple_repeat 2 39 0 2351 98 0 0 chr20 43943763 43944050 -22723955 - AluSx SINE Alu -25 287 1 2097 217 114 15 chr20 43944072 43944252 -22723753 + L1ME3A LINE L1 5452 5613 -557 1826 167 10 3 chr20 43944252 43944540 -22723465 + AluJo SINE Alu 1 290 -22 2097 217 114 15 chr20 43944540 43945010 -22722995 + L1ME3A LINE L1 5613 6170 0 2421 98 0 0 chr20 43945381 43945686 -22722319 - AluSc SINE Alu -4 305 1 456 196 52 0 chr20 43945918 43946015 -22721990 + MIR SINE MIR 80 181 -81 190 276 17 52 chr20 43946064 43946122 -22721883 + L2 LINE L2 3124 3179 -93 268 281 45 45 chr20 43946344 43946433 -22721572 + MIR SINE MIR 30 118 -90 210 296 80 23 chr20 43946435 43946523 -22721482 - MIR SINE MIR -169 93 1 385 295 128 0 chr20 43946527 43946683 -22721322 + MER5A DNA MER1_type 14 189 0 2341 113 0 0 chr20 43946966 43947266 -22720739 + AluSx SINE Alu 1 300 -12 593 295 5 26 chr20 43947272 43947465 -22720540 - MLT1E LTR MaLR -55 538 350 687 245 66 36 chr20 43947480 43947676 -22720329 + MIR SINE MIR 49 250 -12 22 0 0 0 chr20 43947744 43947766 -22720239 + AT_rich Low_complexity Low_complexity 1 22 0 471 244 130 8 chr20 43948520 43948643 -22719362 - MIR3 SINE MIR -35 173 65 417 250 9 28 chr20 43948839 43948947 -22719058 - L2 LINE L2 0 3313 3208 1208 246 132 35 chr20 43948958 43949080 -22718925 - L2 LINE L2 0 3313 3204 1976 131 33 0 chr20 43949080 43949403 -22718602 - AluSx SINE Alu 0 332 1 1208 246 132 35 chr20 43949403 43949710 -22718295 - L2 LINE L2 -109 3204 2841 236 255 0 0 chr20 43950336 43950387 -22717618 - MER58 DNA MER1_type -2366 54 4 280 258 158 0 chr20 43950404 43950524 -22717481 + L2 LINE L2 2338 2476 -838 904 298 106 29 chr20 43950571 43951061 -22716944 - L2 LINE L2 -449 2865 2338 888 227 45 5 chr20 43951063 43951261 -22716744 + MER58A DNA MER1_type 12 217 -7 1839 167 6 10 chr20 43951339 43951650 -22716355 + AluJo SINE Alu 1 310 -2 2012 136 21 0 chr20 43951656 43951943 -22716062 + AluJo SINE Alu 6 298 -14 196 191 143 0 chr20 43951963 43952005 -22716000 + MIR SINE MIR 119 166 -96 4970 93 20 12 chr20 43952982 43953745 -22714260 - L1PA14 LINE L1 -1 6160 5392 434 294 8 0 chr20 43953793 43953912 -22714093 + MER94 DNA DNA 1 120 -14 414 258 94 31 chr20 43953938 43954066 -22713939 + MIR3 SINE MIR 8 143 -65 262 276 162 9 chr20 43954213 43954318 -22713687 - MIR SINE MIR -122 140 20 449 351 78 14 chr20 43954656 43954938 -22713067 + L1M4 LINE L1 2357 2656 -3490 638 255 124 84 chr20 43954993 43955413 -22712592 - L1MDa LINE L1 -2846 3694 3191 2048 148 140 11 chr20 43955413 43955792 -22712213 - MSTA LTR MaLR 0 428 1 638 255 124 84 chr20 43955792 43955910 -22712095 - L1MDa LINE L1 -3349 3191 3079 365 303 62 52 chr20 43955970 43956181 -22711824 - L1MDa LINE L1 -3621 2919 2707 465 19 0 0 chr20 43956189 43956243 -22711762 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 2027 147 0 0 chr20 43956243 43956528 -22711477 - AluSx SINE Alu -27 285 1 355 289 137 8 chr20 43956532 43956765 -22711240 - L1MDa LINE L1 -3892 2648 2454 2384 236 36 0 chr20 43956834 43957440 -22710565 + L1M4 LINE L1 4271 4898 -1248 2946 216 166 52 chr20 43957457 43958545 -22709460 - L2 LINE L2 -337 2977 1765 531 307 94 5 chr20 43958679 43958891 -22709114 + MIR SINE MIR 32 262 0 185 214 0 89 chr20 43959118 43959174 -22708831 - L2 LINE L2 -7 3265 3215 181 263 18 0 chr20 43959365 43959422 -22708583 - MIR SINE MIR -83 125 68 200 88 29 0 chr20 43959606 43959640 -22708365 + L2 LINE L2 3016 3050 -222 927 243 68 40 chr20 43959878 43960030 -22707975 - MIR SINE MIR -3 259 96 2450 168 24 5 chr20 43960030 43960448 -22707557 - MSTB LTR MaLR 0 426 1 927 243 68 40 chr20 43960448 43960546 -22707459 - MIR SINE MIR -166 96 2 1997 119 7 14 chr20 43960652 43960937 -22707068 - AluJb SINE Alu -9 303 21 189 234 62 47 chr20 43960958 43961022 -22706983 - L2 LINE L2 -21 3251 3187 416 284 220 37 chr20 43961206 43961907 -22706098 - L2 LINE L2 -410 2904 2076 1094 121 72 34 chr20 43962361 43962568 -22705437 + L1MA5A LINE L1 6080 6294 -3 510 269 29 49 chr20 43962624 43962869 -22705136 - L1MDa LINE L1 -4909 1621 1382 * 1412 294 50 16 chr20 43962861 43963442 -22704563 + L1M4 LINE L1 3589 4189 -1957 264 278 46 37 chr20 43963445 43963553 -22704452 - L2 LINE L2 -848 2466 2358 323 256 131 15 chr20 43963573 43963710 -22704295 + MIR3 SINE MIR 20 172 -36 215 225 0 0 chr20 43963916 43963956 -22704049 + (TTG)n Simple_repeat Simple_repeat 1 40 0 784 154 7 7 chr20 43964563 43964712 -22703293 - L1MB8 LINE L1 0 6178 6030 1857 179 19 0 chr20 43964716 43965024 -22702981 + 7SLRNA srpRNA srpRNA 1 314 -6 1537 149 27 0 chr20 43965033 43965254 -22702751 + AluJb SINE Alu 2 228 -84 613 203 7 29 chr20 43965283 43965421 -22702584 - L1MB7 LINE L1 -144 6040 5906 274 249 76 96 chr20 43965521 43965718 -22702287 - L2 LINE L2 -340 2974 2782 2108 143 3 0 chr20 43965747 43966047 -22701958 + AluSx SINE Alu 1 301 -11 300 214 171 64 chr20 43966207 43966347 -22701658 - MLT1K LTR MaLR -1 587 433 1029 31 78 0 chr20 43967016 43967145 -22700860 + MER85 DNA T2_type 1 139 0 457 277 81 0 chr20 43967418 43967566 -22700439 + MIR SINE MIR 103 262 0 1525 212 114 30 chr20 43968268 43968734 -22699271 - MLT1D LTR MaLR 0 505 1 263 175 0 0 chr20 43968758 43968798 -22699207 - L2 LINE L2 -20 3293 3254 377 216 35 44 chr20 43970041 43970144 -22697861 + MIR SINE MIR 50 153 -55 737 259 74 109 chr20 43971039 43971318 -22696687 - MLT1H LTR MaLR 0 549 299 2151 131 13 3 chr20 43971318 43971624 -22696381 + AluSx SINE Alu 1 309 -3 737 259 74 109 chr20 43971624 43971911 -22696094 - MLT1H LTR MaLR -250 299 3 632 302 29 41 chr20 43971957 43972202 -22695803 + MIR SINE MIR 1 242 -20 362 284 11 0 chr20 43973659 43973754 -22694251 - MIR SINE MIR -79 183 88 948 144 0 0 chr20 43973760 43973892 -22694113 - AluSq/x SINE Alu -181 132 1 314 306 42 35 chr20 43973903 43973940 -22694065 + L2 LINE L2 2900 2935 -337 1142 157 32 42 chr20 43973940 43974157 -22693848 - MER20 DNA MER1_type 0 219 5 314 306 42 35 chr20 43974157 43974263 -22693742 + L2 LINE L2 2935 3044 -228 698 230 22 11 chr20 43974277 43974455 -22693550 + MER96B DNA MER1_type? 3 182 -235 245 250 89 73 chr20 43974495 43974619 -22693386 + L2 LINE L2 3147 3272 0 382 240 31 10 chr20 43974621 43974717 -22693288 - MIR SINE MIR -94 114 17 901 253 54 5 chr20 43975122 43975343 -22692662 - MIR SINE MIR -10 252 21 291 301 137 16 chr20 43976332 43976549 -22691456 + MIR SINE MIR 10 255 -7 279 0 0 0 chr20 43976549 43976580 -22691425 + (ACTG)n Simple_repeat Simple_repeat 4 34 0 234 0 0 0 chr20 43976582 43976608 -22691397 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 346 310 68 10 chr20 43976708 43976876 -22691129 - MIR3 SINE MIR -63 145 12 378 255 79 37 chr20 43977208 43977392 -22690613 + MIR SINE MIR 22 212 -50 330 215 9 27 chr20 43977452 43977566 -22690439 + MIR SINE MIR 22 131 -77 1351 48 0 0 chr20 43977781 43977947 -22690058 + L1PA8 LINE L1 6006 6171 -1 664 247 32 0 chr20 43978064 43978222 -22689783 + MER5A DNA MER1_type 4 166 -23 1919 145 3 27 chr20 43979107 43979404 -22688601 - AluJb SINE Alu -22 290 1 257 340 26 51 chr20 43979729 43979885 -22688120 + MIR SINE MIR 77 228 -34 234 333 0 0 chr20 43980443 43980506 -22687499 + G-rich Low_complexity Low_complexity 1 63 0 385 185 9 19 chr20 43980550 43980642 -22687363 + GA-rich Low_complexity Low_complexity 1 93 -14 2081 119 0 4 chr20 43980642 43980919 -22687086 + AluSx SINE Alu 28 303 -9 385 185 9 19 chr20 43980919 43980934 -22687071 + GA-rich Low_complexity Low_complexity 93 107 0 787 275 39 11 chr20 43980961 43981245 -22686760 - LTR16B LTR ERVL -172 292 1 600 294 97 69 chr20 43981605 43982057 -22685948 - L1M4 LINE L1 -2749 3397 2933 511 317 60 36 chr20 43982087 43982336 -22685669 - HAL1b LINE L1 0 1348 1094 418 255 55 11 chr20 43982395 43982578 -22685427 - L1MC4a LINE L1 -221 5900 5710 33 0 0 0 chr20 43982614 43982647 -22685358 + AT_rich Low_complexity Low_complexity 1 33 0 646 297 53 27 chr20 43982660 43982997 -22685008 - LTR16A1 LTR ERVL -107 350 5 449 281 137 13 chr20 43983226 43983379 -22684626 + MIR SINE MIR 21 192 -70 2129 88 27 15 chr20 43983612 43983697 -22684308 + L1PB1 LINE L1 5692 5774 -377 189 0 0 0 chr20 43983697 43983718 -22684287 + (TA)n Simple_repeat Simple_repeat 2 22 0 2129 88 27 15 chr20 43983718 43983960 -22684045 + L1PB1 LINE L1 5774 6023 -128 259 313 52 15 chr20 43984903 43985037 -22682968 + L2 LINE L2 2560 2698 -616 180 200 25 0 chr20 43985090 43985130 -22682875 - MIR SINE MIR -86 122 82 448 289 34 102 chr20 43985406 43985700 -22682305 - L2 LINE L2 -6 3266 2993 545 236 54 14 chr20 43985982 43986130 -22681875 - L2 LINE L2 0 3313 3160 456 331 30 6 chr20 43986864 43987033 -22680972 + MIR SINE MIR 11 183 -79 382 298 143 25 chr20 43987160 43987405 -22680600 + L2 LINE L2 1684 1957 -1357 318 302 101 17 chr20 43987833 43988012 -22679993 + L2 LINE L2 2681 2874 -440 273 234 0 0 chr20 43988173 43988220 -22679785 + L2 LINE L2 3207 3253 -19 852 230 17 104 chr20 43989352 43989709 -22678296 - L2 LINE L2 -43 3270 2945 897 183 54 0 chr20 43989717 43989903 -22678102 - MER20 DNA MER1_type 0 219 24 272 238 40 67 chr20 43989920 43990143 -22677862 - L2 LINE L2 -376 2938 2722 1674 208 75 77 chr20 43990851 43991357 -22676648 + MLT1D LTR MaLR 1 505 0 464 284 162 48 chr20 43991513 43991932 -22676073 + L2 LINE L2 2806 3272 0 374 185 12 37 chr20 43992244 43992325 -22675680 + MLT1D LTR MaLR 1 79 -426 276 282 128 10 chr20 43992737 43992932 -22675073 + L2 LINE L2 2828 3045 -227 1088 277 56 15 chr20 43993245 43993639 -22674366 - LTR16A LTR ERVL -8 442 33 501 294 50 23 chr20 43993800 43994021 -22673984 + MIR SINE MIR 6 232 -30 1131 178 36 18 chr20 43994070 43994289 -22673716 + MER58A DNA MER1_type 2 224 0 2284 105 3 0 chr20 43994427 43994722 -22673283 - AluSx SINE Alu -16 296 1 232 284 147 20 chr20 43994814 43994916 -22673089 - MIR SINE MIR -18 244 130 608 251 74 6 chr20 43994925 43995088 -22672917 + MIR SINE MIR 4 177 -85 195 129 0 0 chr20 43995147 43995178 -22672827 + (TTA)n Simple_repeat Simple_repeat 2 32 0 341 150 17 0 chr20 43995220 43995280 -22672725 + MSTA LTR MaLR 368 428 0 1756 108 34 0 chr20 43995282 43995550 -22672455 + MSTA-int LTR MaLR 3 279 -1301 1760 139 4 4 chr20 43995583 43995850 -22672155 + AluJo SINE Alu 2 268 -44 367 207 12 0 chr20 43995949 43996031 -22671974 + L1MA7 LINE L1 6209 6291 0 284 180 0 0 chr20 43996665 43996715 -22671290 - L2 LINE L2 -261 3052 3003 667 242 72 97 chr20 43996998 43997329 -22670676 - LTR16C LTR ERVL -17 474 152 505 260 116 0 chr20 43997973 43998146 -22669859 + MIR SINE MIR 56 248 -14 233 335 126 5 chr20 43998194 43998385 -22669620 - L2 LINE L2 -1415 1899 1686 630 266 163 45 chr20 43998449 43998848 -22669157 - LTR16A1 LTR ERVL -11 446 1 2733 96 25 0 chr20 43999477 43999832 -22668173 - THE1B LTR MaLR 0 364 1 225 310 11 23 chr20 44000216 44000303 -22667702 - L2 LINE L2 -535 2779 2694 619 336 17 14 chr20 44000319 44000614 -22667391 - L2 LINE L2 -754 2560 2265 276 303 62 9 chr20 44000960 44001181 -22666824 - L1ME3 LINE L1 -238 5924 5689 919 183 26 175 chr20 44001183 44001373 -22666632 - LTR37A LTR ERV1 -3 423 206 4404 49 2 0 chr20 44001373 44001907 -22666098 + L1PA5 LINE L1 5620 6154 0 919 183 26 175 chr20 44001907 44002041 -22665964 - LTR37A LTR ERV1 -220 206 194 3553 177 45 18 chr20 44002041 44002758 -22665247 + L1MB3 LINE L1 5445 6180 -3 919 183 26 175 chr20 44002758 44002923 -22665082 - LTR37A LTR ERV1 -232 194 6 369 301 37 31 chr20 44002952 44003115 -22664890 - L1ME3 LINE L1 -2119 5689 5526 390 278 16 8 chr20 44003116 44003269 -22664736 + L1ME3 LINE L1 5355 5511 -663 307 293 93 7 chr20 44003605 44003745 -22664260 + L1M4 LINE L1 2288 2439 -3707 1580 223 83 19 chr20 44003839 44004400 -22663605 + L1MB3 LINE L1 5553 6161 -4 749 139 229 12 chr20 44004626 44004792 -22663213 - MER20 DNA MER1_type 0 219 18 492 310 160 60 chr20 44004804 44004959 -22663046 + L1M4 LINE L1 2266 2404 -3742 3452 24 0 5 chr20 44004959 44005332 -22662673 + SVA Other Other 1016 1386 0 492 310 160 60 chr20 44005332 44005405 -22662600 + L1M4 LINE L1 2404 2468 -3678 2116 136 0 19 chr20 44005405 44005713 -22662292 + AluSx SINE Alu 1 302 -10 492 310 160 60 chr20 44005713 44005857 -22662148 + L1M4 LINE L1 2468 2596 -3550 249 33 0 0 chr20 44005857 44005887 -22662118 + (TA)n Simple_repeat Simple_repeat 1 30 0 492 310 160 60 chr20 44005887 44006284 -22661721 + L1M4 LINE L1 2596 3754 -2392 1599 125 125 23 chr20 44006321 44006585 -22661420 + AluSx SINE Alu 1 291 -21 3868 105 20 5 chr20 44006952 44007505 -22660500 - L1PA10 LINE L1 0 6168 5608 574 124 166 14 chr20 44007537 44007682 -22660323 + L1MA7 LINE L1 6125 6291 0 784 219 37 27 chr20 44008229 44008416 -22659589 - MIR SINE MIR -72 190 2 308 257 7 111 chr20 44009791 44009935 -22658070 - MIR SINE MIR -63 145 17 1077 239 8 31 chr20 44010066 44010321 -22657684 - MIR SINE MIR -13 249 1 364 226 20 54 chr20 44010915 44011030 -22656975 - L1MCa LINE L1 -1339 6983 1996 368 230 0 10 chr20 44011030 44011130 -22656875 + (CATA)n Simple_repeat Simple_repeat 3 101 0 595 222 21 14 chr20 44011131 44011275 -22656730 + LTR37B LTR ERV1 19 163 -305 639 225 19 57 chr20 44011388 44011597 -22656408 + LTR37B LTR ERV1 193 393 -75 186 292 0 0 chr20 44012225 44012273 -22655732 + MIR SINE MIR 102 149 -113 289 306 3 12 chr20 44012417 44012524 -22655481 + MIR SINE MIR 74 181 -27 417 222 159 24 chr20 44012546 44012672 -22655333 - MIR SINE MIR -71 191 49 292 343 106 17 chr20 44012876 44013112 -22654893 - L2 LINE L2 -337 2977 2721 186 286 14 14 chr20 44013263 44013333 -22654672 - L2 LINE L2 -881 2433 2364 1196 257 87 12 chr20 44013404 44013816 -22654189 - LTR16C LTR ERVL -48 443 1 339 278 118 106 chr20 44014171 44014367 -22653638 - L1 LINE L1 -1756 4390 4198 1659 174 12 47 chr20 44014367 44014689 -22653316 - AluJo SINE Alu -1 311 1 339 278 118 106 chr20 44014689 44014917 -22653088 - L1 LINE L1 -1948 4198 3961 1065 221 65 43 chr20 44015131 44015456 -22652549 - MLT1H LTR MaLR 0 549 218 1190 141 26 0 chr20 44015456 44015648 -22652357 + L1PB1 LINE L1 4 200 -6663 9360 176 64 64 chr20 44015650 44019836 -22648169 + L1PB1 LINE L1 636 5130 -1737 438 20 0 0 chr20 44019836 44019887 -22648118 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 9360 176 64 64 chr20 44019887 44021587 -22646418 + L1PB1 LINE L1 5130 6829 -38 304 233 147 17 chr20 44021802 44021918 -22646087 + L1M4 LINE L1 3715 3845 -2301 305 247 24 12 chr20 44021985 44022070 -22645935 - MIR SINE MIR -80 128 43 285 241 49 42 chr20 44022465 44022618 -22645387 - MIR SINE MIR -20 242 45 205 267 0 0 chr20 44022835 44022895 -22645110 - L2 LINE L2 -302 2970 2911 366 294 0 0 chr20 44023640 44023732 -22644273 + MIR SINE MIR 53 144 -118 337 268 0 0 chr20 44023913 44023984 -22644021 - MIR3 SINE MIR -34 174 104 965 202 70 35 chr20 44024626 44024938 -22643067 - LTR16A1 LTR ERVL -2 455 133 192 77 0 0 chr20 44026452 44026478 -22641527 + (CCCCAG)n Simple_repeat Simple_repeat 2 27 0 201 323 87 19 chr20 44027133 44027294 -22640711 + MIR SINE MIR 13 184 -78 1409 222 67 9 chr20 44028296 44028639 -22639366 - MLT1A1 LTR MaLR 0 365 3 462 242 58 21 chr20 44028781 44028971 -22639034 + LTR16A1 LTR ERVL 245 441 -16 554 274 105 5 chr20 44030059 44030249 -22637756 + MIR SINE MIR 12 220 -42 313 187 83 5 chr20 44030311 44030391 -22637614 - MLT1I LTR MaLR 0 409 334 262 287 23 0 chr20 44030417 44030504 -22637501 - MLT1J2 LTR MaLR -143 307 219 2052 116 38 61 chr20 44030622 44030966 -22637039 + MER1B DNA MER1_type 2 337 0 240 267 22 8 chr20 44031044 44031140 -22636865 - MIR SINE MIR -65 143 46 191 305 152 19 chr20 44031657 44031762 -22636243 + MIR SINE MIR 123 241 -21 269 287 28 28 chr20 44031764 44031872 -22636133 + MIR SINE MIR 100 207 -55 285 325 106 16 chr20 44032191 44032314 -22635691 - L2 LINE L2 -3 3269 3136 573 311 97 45 chr20 44032722 44033303 -22634702 - L2 LINE L2 -135 3178 2563 1646 199 41 25 chr20 44033621 44033987 -22634018 + MLT1A2 LTR MaLR 1 372 -2 2425 94 7 0 chr20 44034183 44034491 -22633514 + AluSp SINE Alu 1 310 -3 1294 175 122 16 chr20 44034513 44034816 -22633189 + MER2 DNA MER2_type 9 343 -2 2319 93 0 32 chr20 44034846 44035158 -22632847 + AluY SINE Alu 1 302 -9 362 290 185 37 chr20 44035158 44035314 -22632691 - HAL1 LINE L1 -41 2466 2334 2215 95 3 0 chr20 44035314 44035598 -22632407 - AluY SINE Alu -13 298 14 362 290 185 37 chr20 44035598 44035900 -22632105 - HAL1 LINE L1 -173 2334 1940 1460 259 78 21 chr20 44035904 44036426 -22631579 - HAL1 LINE L1 -629 1878 1327 1987 145 30 0 chr20 44036667 44036964 -22631041 - AluJo SINE Alu -5 307 2 1725 149 72 53 chr20 44037022 44037397 -22630608 - MLT1B LTR MaLR -2 388 7 223 75 0 57 chr20 44038019 44038072 -22629933 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 313 244 44 0 chr20 44038212 44038302 -22629703 + MIR SINE MIR 167 260 -2 213 333 125 17 chr20 44038441 44038561 -22629444 + MIR3 SINE MIR 1 133 -75 665 301 41 0 chr20 44039419 44039638 -22628367 - MIR SINE MIR -32 230 3 2234 201 31 36 chr20 44039889 44039958 -22628047 - L1ME2 LINE L1 -3 6161 6093 2068 124 3 23 chr20 44039958 44040264 -22627741 - AluSx SINE Alu -12 300 1 2234 201 31 36 chr20 44040264 44040807 -22627198 - L1ME2 LINE L1 -71 6093 5552 421 230 201 28 chr20 44041369 44041652 -22626353 - MLT1G1 LTR MaLR -5 590 259 1932 132 0 35 chr20 44041669 44041958 -22626047 - AluJb SINE Alu -10 302 24 232 65 0 0 chr20 44042068 44042099 -22625906 - MLT1G1 LTR MaLR -342 125 95 1622 203 49 16 chr20 44042103 44042473 -22625532 + MLT1C LTR MaLR 80 461 -6 673 236 64 0 chr20 44042649 44042806 -22625199 - MER20 DNA MER1_type -52 167 1 1685 148 45 21 chr20 44042971 44043262 -22624743 - AluJo SINE Alu -14 298 1 576 209 50 105 chr20 44043960 44044252 -22623753 - L1ME2 LINE L1 -60 6102 5829 1723 139 0 12 chr20 44044252 44044511 -22623494 - AluSx SINE Alu -19 293 38 576 209 50 105 chr20 44044511 44044541 -22623464 - L1ME2 LINE L1 -333 5829 5799 553 137 105 0 chr20 44044787 44044882 -22623123 + L1MA4 LINE L1 6184 6288 -12 425 281 82 0 chr20 44045313 44045448 -22622557 + MIR SINE MIR 107 252 -10 2300 177 12 102 chr20 44045465 44045554 -22622451 + MER70A LTR ERVL 1 96 -376 2145 126 0 7 chr20 44045554 44045847 -22622158 - AluSx SINE Alu -21 291 1 2300 177 12 102 chr20 44045847 44046276 -22621729 + MER70A LTR ERVL 96 472 0 219 244 26 122 chr20 44046276 44046391 -22621614 + MIR SINE MIR 47 150 -58 1062 147 0 0 chr20 44046391 44046534 -22621471 + AluSx SINE Alu 19 161 -151 195 289 0 0 chr20 44046539 44046591 -22621414 + MIR3 SINE MIR 157 208 0 252 291 22 30 chr20 44046619 44046753 -22621252 - L1 LINE L1 -1112 5034 4902 802 240 105 55 chr20 44047586 44047986 -22620019 + MLT1H LTR MaLR 130 549 0 446 286 145 34 chr20 44049196 44049458 -22618547 - HAL1 LINE L1 -7 2500 2210 334 365 22 55 chr20 44049629 44049840 -22618165 - L2 LINE L2 -40 3273 3071 2086 110 7 13 chr20 44049840 44050140 -22617865 + AluSx SINE Alu 1 298 -14 334 365 22 55 chr20 44050140 44050199 -22617806 - L2 LINE L2 -242 3071 3012 563 307 84 0 chr20 44050267 44050492 -22617513 - L1MEc LINE L1 -5920 476 233 590 234 44 6 chr20 44050511 44050669 -22617336 - MLT1B LTR MaLR 0 390 227 799 159 0 16 chr20 44050817 44050943 -22617062 - FLAM_C SINE Alu -14 129 6 827 150 60 30 chr20 44050951 44051118 -22616887 - MLT1B LTR MaLR -217 173 2 387 232 0 0 chr20 44051119 44051201 -22616804 - L1MEc LINE L1 -6194 202 121 457 282 125 78 chr20 44051247 44051468 -22616537 - L1 LINE L1 -2801 3345 3101 2304 116 0 0 chr20 44051468 44051769 -22616236 - AluSx SINE Alu -11 301 1 457 282 125 78 chr20 44051769 44051937 -22616068 - L1 LINE L1 -3045 3101 2942 815 239 108 20 chr20 44051939 44052245 -22615760 - L1ME3A LINE L1 -5 6165 5833 2138 110 7 0 chr20 44052590 44052909 -22615096 + AluSq SINE Alu 1 321 0 1606 194 73 61 chr20 44053227 44053697 -22614308 - MLT1D LTR MaLR -2 503 28 1432 158 16 53 chr20 44053697 44054001 -22614004 - MSTA LTR MaLR 0 428 136 511 153 12 0 chr20 44054275 44054360 -22613645 - MER58B DNA MER1_type 0 341 256 792 144 0 0 chr20 44054360 44054485 -22613520 - MER51C LTR ERV1 0 640 516 830 125 0 0 chr20 44054491 44054611 -22613394 - AluY SINE Alu -3 308 189 796 111 24 0 chr20 44054611 44054737 -22613268 - MER51C LTR ERV1 -114 526 398 3308 112 59 35 chr20 44054857 44055449 -22612556 - LTR18B LTR ERVL 0 614 9 1765 150 26 81 chr20 44056210 44056594 -22611411 - MER51C LTR ERV1 -236 404 1 661 245 21 80 chr20 44056618 44056760 -22611245 - MER58B DNA MER1_type -118 223 74 2150 126 0 0 chr20 44056760 44057046 -22610959 + AluSx SINE Alu 1 286 -26 423 0 0 0 chr20 44057046 44057093 -22610912 + (CATA)n Simple_repeat Simple_repeat 2 48 0 661 245 21 80 chr20 44057093 44057186 -22610819 - MER58B DNA MER1_type -265 76 1 402 262 25 25 chr20 44057566 44057688 -22610317 + MIR SINE MIR 93 214 -48 1955 125 33 40 chr20 44058146 44058449 -22609556 - AluSx SINE Alu -11 301 1 6276 108 9 7 chr20 44058610 44059909 -22608096 + L1PA15 LINE L1 4862 6163 -2 461 224 0 0 chr20 44060170 44060286 -22607719 + L1M4 LINE L1 3398 3513 -2633 279 200 0 0 chr20 44060285 44060340 -22607665 - L1 LINE L1 -2710 3436 3382 * 1882 145 18 2 chr20 44060354 44060787 -22607218 + L1M2 LINE L1 5166 5604 -687 671 337 61 15 chr20 44060829 44061158 -22606847 - ERVL LTR ERVL -3929 1835 1492 246 293 14 79 chr20 44061191 44061241 -22606764 - L2 LINE L2 -28 3285 3233 2133 177 11 0 chr20 44061241 44061602 -22606403 + MLT1A1 LTR MaLR 1 365 0 246 293 14 79 chr20 44061602 44061691 -22606314 - L2 LINE L2 -80 3233 3155 22 0 0 0 chr20 44061969 44061991 -22606014 + AT_rich Low_complexity Low_complexity 1 22 0 898 204 6 0 chr20 44062432 44062589 -22605416 + FRAM SINE Alu 1 158 -18 692 245 136 67 chr20 44063330 44063705 -22604300 - MLT1L LTR MaLR -5 610 210 906 268 123 24 chr20 44063863 44064008 -22603997 + LTR16A LTR ERVL 34 163 -287 2341 102 45 23 chr20 44064008 44064362 -22603643 - THE1B LTR MaLR -2 362 1 906 268 123 24 chr20 44064362 44064589 -22603416 + LTR16A LTR ERVL 163 443 -7 220 294 22 87 chr20 44064606 44064698 -22603307 - MIR SINE MIR -120 88 3 880 235 95 41 chr20 44064808 44065102 -22602903 + MLT1J2 LTR MaLR 21 330 -120 197 254 119 0 chr20 44065182 44065241 -22602764 - L2 LINE L2 -65 3207 3142 973 271 67 77 chr20 44065299 44065969 -22602036 + MER77 LTR ERV1 22 737 -6 453 141 0 0 chr20 44066059 44066130 -22601875 + Alu SINE Alu 241 311 -1 494 239 37 15 chr20 44066274 44066408 -22601597 + MIR3 SINE MIR 58 194 -14 275 354 55 0 chr20 44066468 44066595 -22601410 - L3 LINE CR1 -28 1549 1416 437 278 5 9 chr20 44066622 44066760 -22601245 + MIR SINE MIR 45 183 -60 252 59 0 0 chr20 44067682 44067716 -22600289 + (CA)n Simple_repeat Simple_repeat 2 35 0 2129 122 0 26 chr20 44067890 44068201 -22599804 - AluSx SINE Alu -9 303 1 282 253 84 90 chr20 44068225 44068391 -22599614 - MIR SINE MIR -67 195 31 285 154 179 51 chr20 44068507 44068585 -22599420 + MIR SINE MIR 38 125 -83 453 171 111 26 chr20 44068761 44068878 -22599127 - MIR SINE MIR -41 221 95 268 225 31 108 chr20 44071186 44071315 -22596690 + L2 LINE L2 2935 3053 -219 405 0 0 0 chr20 44072034 44072079 -22595926 + (TG)n Simple_repeat Simple_repeat 1 45 0 186 175 150 0 chr20 44072447 44072487 -22595518 + L2 LINE L2 3203 3248 -65 235 250 273 31 chr20 44072502 44072630 -22595375 - MIR3 SINE MIR -15 193 35 291 262 146 12 chr20 44072780 44073112 -22594893 + LTR16A1 LTR ERVL 1 457 0 232 219 137 0 chr20 44073869 44073942 -22594063 + MIR SINE MIR 41 123 -85 924 230 77 0 chr20 44073968 44074177 -22593828 - MIR SINE MIR -21 241 17 212 327 100 9 chr20 44074188 44074298 -22593707 + MIR SINE MIR 110 229 -33 2473 77 0 0 chr20 44074467 44074767 -22593238 + AluSc SINE Alu 1 300 -9 743 134 45 30 chr20 44074986 44075120 -22592885 + MER5A DNA MER1_type 1 136 -53 247 277 101 25 chr20 44075139 44075258 -22592747 + L2 LINE L2 2985 3112 -160 611 282 114 10 chr20 44075306 44075508 -22592497 - MIR SINE MIR 0 262 40 277 218 0 0 chr20 44075568 44075623 -22592382 + L2 LINE L2 3236 3290 -23 995 178 73 14 chr20 44076230 44076449 -22591556 + MLT1J2 LTR MaLR 3 234 -216 1863 176 45 9 chr20 44076473 44076898 -22591107 - Charlie4a DNA MER1_type -8 500 61 1150 221 89 80 chr20 44076900 44077060 -22590945 + LTR16A1 LTR ERVL 1 158 -299 2530 66 0 3 chr20 44077060 44077364 -22590641 + AluY SINE Alu 1 303 -8 1150 221 89 80 chr20 44077364 44077651 -22590354 + LTR16A1 LTR ERVL 158 452 -5 251 78 16 188 chr20 44077653 44077717 -22590288 - Charlie4a DNA MER1_type -449 59 7 359 280 56 0 chr20 44077720 44077863 -22590142 + MLT1J1 LTR MaLR 290 440 -6 747 270 15 29 chr20 44077904 44078108 -22589897 - MIR SINE MIR -31 231 31 1473 108 40 5 chr20 44078108 44078330 -22589675 + MER30 DNA MER1_type 1 230 0 497 267 28 44 chr20 44078598 44078778 -22589227 - L2 LINE L2 -218 3054 2878 323 162 67 114 chr20 44078909 44079014 -22588991 - MIR SINE MIR -74 188 89 700 240 77 65 chr20 44079020 44079179 -22588826 - MIR SINE MIR 0 262 97 1954 142 0 33 chr20 44079179 44079481 -22588524 + AluJo SINE Alu 7 298 -14 700 240 77 65 chr20 44079481 44079567 -22588438 - MIR SINE MIR -165 97 14 220 260 52 39 chr20 44079586 44079663 -22588342 - MIR SINE MIR -183 79 2 206 329 14 14 chr20 44079738 44079808 -22588197 + MIR SINE MIR 1 70 -192 843 147 11 43 chr20 44079808 44079992 -22588013 + MER96B DNA MER1_type? 1 178 -239 486 223 31 46 chr20 44080050 44080180 -22587825 + MIR SINE MIR 87 214 -48 274 341 39 16 chr20 44080836 44081018 -22586987 + L2 LINE L2 2624 2809 -505 502 240 123 29 chr20 44081115 44081286 -22586719 + MER5A DNA MER1_type 1 187 -2 227 224 35 47 chr20 44081774 44081859 -22586146 + L2 LINE L2 2908 2991 -281 453 253 0 10 chr20 44081896 44081995 -22586010 - L2 LINE L2 -1 3312 3215 894 115 0 43 chr20 44082000 44082139 -22585866 + FLAM_C SINE Alu 1 133 0 1189 208 167 7 chr20 44082185 44082294 -22585711 + MER58B DNA MER1_type 1 91 -2329 2061 131 3 23 chr20 44082294 44082600 -22585405 + AluSx SINE Alu 1 300 -12 1189 208 167 7 chr20 44082600 44082784 -22585221 + MER58B DNA MER1_type 91 341 0 496 237 220 17 chr20 44083171 44083348 -22584657 + MIR SINE MIR 6 218 -44 1261 126 44 44 chr20 44083398 44083604 -22584401 + AluJo SINE Alu 87 292 -20 485 131 12 0 chr20 44083604 44083688 -22584317 + GA-rich Low_complexity Low_complexity 3 87 0 274 115 0 39 chr20 44083724 44083776 -22584229 + L1MB5 LINE L1 6094 6143 -31 326 269 43 71 chr20 44084165 44084306 -22583699 - L2 LINE L2 0 3272 3136 * 360 278 321 0 chr20 44084290 44084477 -22583528 + MIR SINE MIR 16 262 0 3071 166 29 18 chr20 44084569 44084953 -22583052 - L1MB7 LINE L1 -321 5863 5485 2356 73 3 13 chr20 44084953 44085256 -22582749 - AluY SINE Alu -11 300 1 3071 166 29 18 chr20 44085256 44085723 -22582282 - L1MB7 LINE L1 -699 5485 5000 470 133 80 0 chr20 44085772 44085847 -22582158 - MIR SINE MIR -90 172 92 37 23 0 0 chr20 44086001 44086045 -22581960 + AT_rich Low_complexity Low_complexity 1 44 0 1005 178 0 38 chr20 44086137 44086322 -22581683 - FRAM SINE Alu -1 175 1 570 278 34 23 chr20 44086355 44086531 -22581474 + MIR SINE MIR 79 256 -6 2366 110 7 0 chr20 44086741 44087051 -22580954 + AluSx SINE Alu 1 312 0 1295 217 66 22 chr20 44087109 44087534 -22580471 + MLT1D LTR MaLR 12 450 -17 225 0 0 0 chr20 44087534 44087559 -22580446 + (CAAAA)n Simple_repeat Simple_repeat 4 28 0 311 239 68 43 chr20 44087592 44087709 -22580296 - MIR SINE MIR -120 142 23 476 265 81 3 chr20 44088380 44088521 -22579484 + MIR SINE MIR 9 160 -48 1426 212 221 13 chr20 44088532 44088990 -22579015 + MLT1E LTR MaLR 41 593 0 505 197 43 17 chr20 44088990 44089107 -22578898 + MIR SINE MIR 140 259 -3 292 250 26 0 chr20 44089222 44089298 -22578707 + L1MC4a LINE L1 5614 5691 -2117 225 200 229 14 chr20 44089341 44089411 -22578594 + L2 LINE L2 2974 3058 -214 558 236 95 27 chr20 44089484 44089812 -22578193 + L1MC4a LINE L1 5687 6048 -1760 429 36 0 0 chr20 44089816 44089871 -22578134 + (CA)n Simple_repeat Simple_repeat 2 56 0 248 259 47 65 chr20 44089873 44090043 -22577962 + LTR33 LTR ERVL 1 167 -354 368 304 6 17 chr20 44090103 44090359 -22577646 + C-rich Low_complexity Low_complexity 1 253 0 229 249 17 77 chr20 44090370 44090551 -22577454 + C-rich Low_complexity Low_complexity 3 172 0 573 224 84 0 chr20 44090573 44090752 -22577253 + LTR33 LTR ERVL 327 520 -1 317 258 86 0 chr20 44090829 44090922 -22577083 - MIR SINE MIR -45 217 117 361 269 101 70 chr20 44091290 44091588 -22576417 + L1MC5 LINE L1 7439 7745 -216 326 194 125 83 chr20 44091522 44091666 -22576339 - L1MCa LINE L1 -4359 2067 1918 * 353 214 83 72 chr20 44091657 44091968 -22576037 - L1MC5 LINE L1 -216 8025 1918 327 221 114 57 chr20 44091964 44092104 -22575901 - L1MC5 LINE L1 -4361 2065 1918 * 377 236 37 74 chr20 44092115 44092414 -22575591 - L1MC4 LINE L1 -209 8032 1942 216 289 201 86 chr20 44092740 44093124 -22574881 + L2 LINE L2 2814 3241 -31 195 244 0 0 chr20 44093207 44093248 -22574757 - L3 LINE CR1 -11 1566 1526 * 264 174 47 128 chr20 44093214 44093300 -22574705 - MIR3 SINE MIR -22 186 108 448 260 23 73 chr20 44093384 44093561 -22574444 - MIR SINE MIR -27 235 68 210 150 0 0 chr20 44093902 44093942 -22574063 + (CAT)n Simple_repeat Simple_repeat 3 42 0 439 306 200 0 chr20 44093943 44094113 -22573892 - MIR SINE MIR -3 259 56 643 254 6 39 chr20 44094161 44094342 -22573663 + MIR SINE MIR 33 207 -55 227 247 130 0 chr20 44094472 44094549 -22573456 - L2 LINE L2 -36 3236 3150 * 245 296 0 0 chr20 44094548 44094602 -22573403 + MIR SINE MIR 209 262 0 197 355 0 0 chr20 44095114 44095190 -22572815 - L2 LINE L2 0 3272 3197 2220 65 0 81 chr20 44095478 44095785 -22572220 - AluSg SINE Alu -14 296 15 1885 153 0 17 chr20 44095851 44096152 -22571853 - AluJb SINE Alu -16 296 1 273 257 122 33 chr20 44096206 44096420 -22571585 - MER113 DNA MER1_type? -288 233 1 290 215 0 0 chr20 44096654 44096719 -22571286 - MIR SINE MIR -78 130 66 533 239 117 76 chr20 44096779 44097124 -22570881 + L1MC4a LINE L1 5612 5980 -1828 424 152 13 0 chr20 44097124 44097203 -22570802 - MER116 DNA Mariner 0 80 1 533 239 117 76 chr20 44097203 44097292 -22570713 + L1MC4a LINE L1 5980 6064 -1744 2313 93 0 3 chr20 44097348 44097639 -22570366 - AluSg SINE Alu -20 290 1 21 0 0 0 chr20 44097642 44097663 -22570342 + AT_rich Low_complexity Low_complexity 1 21 0 230 185 167 74 chr20 44098298 44098406 -22569599 - MIR SINE MIR -56 206 89 186 229 0 0 chr20 44098455 44098490 -22569515 + MIR SINE MIR 112 146 -116 316 241 13 13 chr20 44098595 44098674 -22569331 + MLT1L LTR MaLR 1 79 -536 309 272 60 33 chr20 44098772 44098956 -22569049 + MLT1J LTR MaLR 250 438 -73 1932 108 44 44 chr20 44098981 44099277 -22568728 - AluJo SINE Alu -16 296 1 595 314 55 23 chr20 44099331 44099551 -22568454 + L3 LINE CR1 1312 1538 -39 623 200 188 0 chr20 44099671 44099836 -22568169 + MER3 DNA MER1_type 10 205 -4 710 254 197 26 chr20 44099858 44100279 -22567726 + L2 LINE L2 2817 3309 -4 446 291 107 7 chr20 44100426 44100745 -22567260 - L2 LINE L2 -165 3107 2764 438 239 43 48 chr20 44101012 44101200 -22566805 + LTR16C LTR ERVL 302 488 -3 312 293 72 22 chr20 44101208 44101389 -22566616 - L2 LINE L2 -570 2744 2555 442 345 74 18 chr20 44101819 44102048 -22565957 - MIR SINE MIR -15 247 6 232 265 254 33 chr20 44102126 44102307 -22565698 + MIR SINE MIR 14 234 -28 529 261 45 65 chr20 44102341 44102568 -22565437 - MIR SINE MIR -34 228 8 2172 119 7 3 chr20 44102791 44103093 -22564912 + AluSx SINE Alu 1 303 -9 398 326 0 0 chr20 44103269 44103398 -22564607 + MIR3 SINE MIR 60 188 -20 2345 96 0 0 chr20 44103498 44103801 -22564204 - AluY SINE Alu -8 303 1 499 299 36 21 chr20 44104248 44104442 -22563563 + L1MC4a LINE L1 5458 5654 -2154 451 303 39 20 chr20 44104733 44104980 -22563025 + L1MC4a LINE L1 5660 5908 -215 315 206 12 101 chr20 44105250 44105349 -22562656 + MIR SINE MIR 25 131 -131 2175 130 0 0 chr20 44105349 44105670 -22562335 + AluSx SINE Alu 1 312 0 315 206 12 101 chr20 44105670 44105756 -22562249 + MIR SINE MIR 131 251 -11 255 154 19 19 chr20 44105848 44105900 -22562105 - MIR3 SINE MIR -142 66 15 2419 61 3 14 chr20 44106250 44106546 -22561459 + AluY SINE Alu 1 293 -18 215 285 115 0 chr20 44106663 44106793 -22561212 + L2 LINE L2 2553 2697 -617 183 156 0 0 chr20 44106913 44106945 -22561060 + (TG)n Simple_repeat Simple_repeat 2 33 0 2114 105 48 0 chr20 44107166 44107460 -22560545 + AluSx SINE Alu 2 309 -3 313 209 134 87 chr20 44107482 44107654 -22560351 + L1MC5 LINE L1 7249 7491 -542 2024 184 45 19 chr20 44107719 44108182 -22559823 + L1M4 LINE L1 4351 4825 -1321 1921 157 10 22 chr20 44108212 44108525 -22559480 + AluJb SINE Alu 1 309 -3 362 266 11 21 chr20 44108544 44108638 -22559367 + L1MC5 LINE L1 7833 7925 -36 2286 122 0 0 chr20 44108703 44109007 -22558998 + AluSx SINE Alu 1 304 -8 674 312 99 32 chr20 44109211 44109659 -22558346 + L2 LINE L2 2792 3267 -5 954 158 66 22 chr20 44109676 44109859 -22558146 + MIR SINE MIR 11 201 -61 971 96 15 29 chr20 44109864 44110000 -22558005 + BC200 scRNA scRNA 3 136 -64 222 274 0 48 chr20 44110000 44110062 -22557943 + MIR SINE MIR 192 250 -12 22 0 0 0 chr20 44110063 44110085 -22557920 + AT_rich Low_complexity Low_complexity 1 22 0 657 269 111 28 chr20 44110228 44110589 -22557416 - MER113 DNA MER1_type? -128 393 3 597 289 40 0 chr20 44110703 44110876 -22557129 - MIR SINE MIR -36 226 47 280 301 122 8 chr20 44111510 44111633 -22556372 + MIR3 SINE MIR 38 174 -34 1668 160 28 9 chr20 44111648 44111966 -22556039 - MER33 DNA MER1_type 0 324 1 483 300 145 15 chr20 44112623 44112823 -22555182 - MIR SINE MIR -29 233 8 238 220 0 0 chr20 44112916 44112966 -22555039 + L1MC3 LINE L1 7048 7097 -688 278 183 11 97 chr20 44112966 44113059 -22554946 + MLT1F1 LTR MaLR 35 119 -448 471 138 12 0 chr20 44113064 44113144 -22554861 + L1MC4 LINE L1 7309 7389 -653 * 1760 205 37 19 chr20 44113137 44113222 -22554783 + L1MD3 LINE L1 7574 7656 -339 2021 159 0 0 chr20 44113222 44113518 -22554487 + AluSx SINE Alu 1 296 -16 1760 205 37 19 chr20 44113518 44113842 -22554163 + L1MD3 LINE L1 7656 7990 -5 332 197 0 0 chr20 44113845 44113906 -22554099 - MER94 DNA DNA -70 64 4 288 213 16 0 chr20 44113928 44113989 -22554016 - MLT1A1 LTR MaLR 0 457 396 * 583 182 35 182 chr20 44113984 44114303 -22553702 - MLT1A1 LTR MaLR -91 274 3 370 288 32 24 chr20 44114435 44114560 -22553445 + MIR3 SINE MIR 37 162 -46 1493 233 75 29 chr20 44114619 44115035 -22552970 + LTR16A LTR ERVL 16 450 0 224 329 13 0 chr20 44115090 44115166 -22552839 - MIR SINE MIR -123 139 63 315 267 99 53 chr20 44115166 44115297 -22552708 - MIR SINE MIR -71 137 1 526 266 22 0 chr20 44115445 44115584 -22552421 + MIR SINE MIR 113 254 -8 209 303 253 0 chr20 44115671 44115770 -22552235 - L2 LINE L2 -270 3043 2920 779 253 34 0 chr20 44115876 44116054 -22551951 + MIR SINE MIR 69 252 -10 382 303 10 26 chr20 44116123 44116492 -22551513 + (TGGG)n Simple_repeat Simple_repeat 1 363 0 326 313 0 21 chr20 44116698 44116842 -22551163 + (TGGA)n Simple_repeat Simple_repeat 1 141 0 1911 113 30 0 chr20 44118280 44118545 -22549460 + AluJb SINE Alu 11 283 -29 980 212 23 23 chr20 44118894 44119111 -22548894 + MIR SINE MIR 2 218 -44 247 205 152 53 chr20 44119207 44119378 -22548627 + L2 LINE L2 2090 2277 -1037 1076 238 80 41 chr20 44119740 44119828 -22548177 + L2 LINE L2 2933 3016 -297 3146 82 65 7 chr20 44119828 44120214 -22547791 + MLT2A2 LTR ERVL 1 363 -90 387 0 0 0 chr20 44120214 44120257 -22547748 + (TA)n Simple_repeat Simple_repeat 1 43 0 333 0 0 0 chr20 44120256 44120293 -22547712 + (CA)n Simple_repeat Simple_repeat 2 38 0 * 3146 82 65 7 chr20 44120257 44120334 -22547671 + MLT2A2 LTR ERVL 363 453 0 1076 238 80 41 chr20 44120334 44120354 -22547651 + L2 LINE L2 3016 3034 -279 476 97 0 75 chr20 44120354 44120447 -22547558 + L1MA1 LINE L1 6213 6298 -4 1076 238 80 41 chr20 44120447 44120702 -22547303 + L2 LINE L2 3034 3311 -2 211 350 67 0 chr20 44120729 44120849 -22547156 + MIR3 SINE MIR 78 205 -3 363 269 179 7 chr20 44121028 44121173 -22546832 - MIR SINE MIR -70 192 23 296 280 11 43 chr20 44121182 44121275 -22546730 - MER5B DNA MER1_type -3 175 86 454 263 35 0 chr20 44121476 44121590 -22546415 - MIR SINE MIR -97 165 48 414 268 153 19 chr20 44121748 44121905 -22546100 + MIR SINE MIR 11 188 -74 1074 214 84 86 chr20 44121915 44122140 -22545865 + L1ME1 LINE L1 5721 5945 -221 432 0 0 0 chr20 44122140 44122188 -22545817 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 1074 214 84 86 chr20 44122188 44122296 -22545709 + L1ME1 LINE L1 5945 6052 -114 2235 107 3 26 chr20 44122296 44122605 -22545400 - AluSq SINE Alu -11 302 1 1074 214 84 86 chr20 44122605 44122710 -22545295 + L1ME1 LINE L1 6052 6159 -7 1508 260 68 14 chr20 44122805 44123579 -22544426 + L2 LINE L2 2498 3313 0 404 270 40 32 chr20 44123670 44123796 -22544209 - MIR SINE MIR -99 163 37 389 336 14 101 chr20 44124410 44124845 -22543160 + L2 LINE L2 2868 3264 -8 322 319 37 12 chr20 44125128 44125272 -22542733 + MIR SINE MIR 33 176 -65 285 270 10 30 chr20 44125324 44125424 -22542581 - L2 LINE L2 -54 3259 3162 276 260 52 0 chr20 44125500 44125577 -22542428 + MIR SINE MIR 168 248 -14 602 181 112 0 chr20 44125765 44125964 -22542041 + Charlie5 DNA MER1_type 2387 2585 -27 216 337 82 10 chr20 44126044 44126142 -22541863 - MIR SINE MIR -66 142 38 2839 113 25 28 chr20 44126251 44126642 -22541363 + MSTB1 LTR MaLR 1 392 -40 2293 105 0 10 chr20 44126642 44126946 -22541059 - AluSg SINE Alu -9 301 1 2839 113 25 28 chr20 44126946 44126987 -22541018 + MSTB1 LTR MaLR 392 432 0 2329 120 126 5 chr20 44127163 44127545 -22540460 + MSTC LTR MaLR 1 428 0 248 319 137 16 chr20 44128388 44128570 -22539435 + L2 LINE L2 2554 2757 -557 614 291 145 0 chr20 44128583 44128824 -22539181 - LTR16A LTR ERVL 0 450 175 761 309 85 42 chr20 44128955 44129457 -22538548 + L2 LINE L2 2766 3272 0 601 223 18 0 chr20 44129617 44129729 -22538276 + MER81 DNA DNA 1 114 0 250 279 12 8 chr20 44129791 44129878 -22538127 + MER63 DNA MER1_type 27 733 -327 1817 166 14 0 chr20 44129950 44130257 -22537748 - AluJo SINE Alu 0 311 1 1045 230 107 89 chr20 44130392 44131066 -22536939 + LTR8A LTR ERV1 1 686 -41 2149 107 4 0 chr20 44131102 44131404 -22536601 + AluSg SINE Alu 1 303 0 547 227 47 28 chr20 44131606 44131762 -22536243 - MIR3 SINE MIR -51 157 16 1937 78 0 0 chr20 44131960 44132191 -22535814 + AluSx SINE Alu 1 231 -81 1634 162 37 24 chr20 44132192 44132489 -22535516 + AluJb SINE Alu 6 306 -6 301 210 0 74 chr20 44132664 44132745 -22535260 + L2 LINE L2 3191 3265 -7 932 219 146 51 chr20 44133413 44133783 -22534222 + L2 LINE L2 2319 2723 -591 841 101 0 0 chr20 44133787 44133896 -22534109 - FLAM_C SINE Alu -4 139 31 355 200 25 0 chr20 44133896 44133976 -22534029 - L1MC4a LINE L1 -449 7359 7278 1958 146 34 0 chr20 44133988 44134283 -22533722 + AluJb SINE Alu 1 305 -7 22 35 0 0 chr20 44134302 44134331 -22533674 + AT_rich Low_complexity Low_complexity 1 29 0 503 335 48 13 chr20 44135338 44135565 -22532440 - MIR SINE MIR -10 252 18 1497 192 50 121 chr20 44135682 44136074 -22531931 + L1M4 LINE L1 4252 4644 -1502 335 111 0 0 chr20 44136074 44136128 -22531877 - Alu SINE Alu 0 302 249 1497 192 50 121 chr20 44136128 44136286 -22531719 + L1M4 LINE L1 4644 4812 -1334 276 185 15 46 chr20 44136604 44136669 -22531336 - MIR SINE MIR -21 241 179 311 196 51 94 chr20 44136671 44136809 -22531196 - MER112 DNA MER1_type -91 169 38 976 183 17 6 chr20 44137008 44137183 -22530822 + MER45A DNA AcHobo 1 177 -1 23 33 0 0 chr20 44137203 44137233 -22530772 + AT_rich Low_complexity Low_complexity 1 30 0 575 234 22 115 chr20 44137261 44137406 -22530599 + MIR SINE MIR 54 172 -90 2091 131 10 3 chr20 44137406 44137704 -22530301 + AluSq SINE Alu 1 300 -13 575 234 22 115 chr20 44137704 44137784 -22530221 + MIR SINE MIR 172 258 -4 1743 134 4 23 chr20 44137800 44138062 -22529943 - AluJb SINE Alu -12 300 44 341 194 69 0 chr20 44138711 44138783 -22529222 + MER112 DNA MER1_type 1 77 -183 606 213 32 43 chr20 44138827 44139015 -22528990 + MER112 DNA MER1_type 65 250 -10 432 346 78 30 chr20 44139135 44139467 -22528538 + L2 LINE L2 2925 3272 0 251 196 324 49 chr20 44139551 44139653 -22528352 - MIR SINE MIR -65 143 14 540 251 300 23 chr20 44140010 44140360 -22527645 + L2 LINE L2 2856 3302 -11 198 0 0 0 chr20 44140361 44140383 -22527622 + (TGAA)n Simple_repeat Simple_repeat 4 25 0 465 151 0 0 chr20 44140483 44140569 -22527436 + (CA)n Simple_repeat Simple_repeat 2 87 0 242 200 0 0 chr20 44140699 44140744 -22527261 + L2 LINE L2 3231 3275 -38 246 326 11 11 chr20 44140776 44140865 -22527140 - MIR SINE MIR -150 112 24 440 178 0 99 chr20 44141305 44141338 -22526667 - MER58 DNA MER1_type -5 2415 2380 1829 146 10 26 chr20 44141338 44141647 -22526358 + AluSx SINE Alu 1 304 -8 440 178 0 99 chr20 44141647 44141714 -22526291 - MER58 DNA MER1_type -40 2380 2325 240 35 0 0 chr20 44141741 44141770 -22526235 + (TTC)n Simple_repeat Simple_repeat 2 30 0 239 355 26 0 chr20 44141774 44141850 -22526155 - MER58 DNA MER1_type -2341 79 2 531 297 46 0 chr20 44141863 44142038 -22525967 - MER5A DNA MER1_type -6 183 1 187 191 95 0 chr20 44142052 44142094 -22525911 - MIR SINE MIR -61 147 102 208 343 118 31 chr20 44142148 44142402 -22525603 + L2 LINE L2 2868 3143 -129 764 165 0 8 chr20 44142413 44142540 -22525465 - FLAM_C SINE Alu -3 130 5 1362 161 4 42 chr20 44142541 44142802 -22525203 + AluJo SINE Alu 57 307 -5 1609 180 0 35 chr20 44142810 44143121 -22524884 + AluJb SINE Alu 1 300 -12 825 187 4 0 chr20 44143138 44143396 -22524609 + (TGGA)n Simple_repeat Simple_repeat 1 259 0 367 250 208 21 chr20 44143535 44143679 -22524326 - MIR SINE MIR -16 246 76 660 149 14 0 chr20 44145862 44146090 -22521915 + (TG)n Simple_repeat Simple_repeat 1 231 0 416 273 31 43 chr20 44146787 44146948 -22521057 - MER5B DNA MER1_type -19 159 1 1490 142 51 40 chr20 44146963 44147259 -22520746 + AluJo SINE Alu 12 310 -2 569 216 85 110 chr20 44147351 44147587 -22520418 + MIR SINE MIR 32 261 -1 1010 149 0 0 chr20 44147956 44148157 -22519848 + AluJb SINE Alu 129 329 0 2212 103 7 0 chr20 44148157 44148467 -22519538 + AluSx SINE Alu 1 312 0 1763 107 0 62 chr20 44148844 44149225 -22518780 - L1PA10 LINE L1 -437 5717 5401 2858 88 37 28 chr20 44149225 44149653 -22518352 + L1PA10 LINE L1 5733 6166 -2 1821 244 190 44 chr20 44149736 44150228 -22517777 + L2 LINE L2 1963 2382 -931 2167 111 3 0 chr20 44150228 44150535 -22517470 + AluSg SINE Alu 1 308 -2 1821 244 190 44 chr20 44150535 44150694 -22517311 + L2 LINE L2 2382 2516 -797 1933 144 0 7 chr20 44150694 44150992 -22517013 + AluSx SINE Alu 1 296 -16 1821 244 190 44 chr20 44150992 44151450 -22516555 + L2 LINE L2 2516 2906 -407 288 0 0 0 chr20 44151450 44151482 -22516523 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 1821 244 190 44 chr20 44151482 44151493 -22516512 + L2 LINE L2 2906 3308 -5 2378 51 3 0 chr20 44152096 44152391 -22515614 - AluY SINE Alu -15 296 1 1293 161 115 35 chr20 44152485 44152549 -22515456 + Charlie1b DNA MER1_type 35 92 -2669 1151 148 101 14 chr20 44152549 44152766 -22515239 + MER46A DNA MER2_type 1 236 0 1293 161 115 35 chr20 44152766 44153131 -22514874 + Charlie1b DNA MER1_type 92 523 0 312 281 41 92 chr20 44155679 44155806 -22512199 + L1MEd LINE L1 813 930 -5275 2393 64 0 0 chr20 44155806 44156132 -22511873 + AluY SINE Alu 1 326 0 312 281 41 92 chr20 44156132 44156198 -22511807 + L1MEd LINE L1 930 998 -5207 4929 144 4 15 chr20 44156219 44156607 -22511398 + MER44D DNA MER2_type 1 251 -2236 1266 194 75 80 chr20 44156607 44157005 -22511000 + MSTD LTR MaLR 1 396 0 4929 144 4 15 chr20 44157005 44157353 -22510652 + MER44D DNA MER2_type 251 601 -4 397 212 0 0 chr20 44157411 44157477 -22510528 + MER58 DNA MER1_type 1 66 -149 543 177 35 18 chr20 44157900 44158013 -22509992 + MER58 DNA MER1_type 2306 2420 0 544 288 65 46 chr20 44158084 44158497 -22509508 + L1MEd LINE L1 1098 1518 -4699 311 283 0 0 chr20 44158503 44158563 -22509442 - MER2 DNA MER2_type -4 341 282 819 180 0 84 chr20 44158652 44158830 -22509175 - MER2 DNA MER2_type -172 173 11 333 269 146 82 chr20 44159051 44159393 -22508612 + L1MEd LINE L1 1863 2186 -4029 612 263 138 38 chr20 44159406 44159562 -22508443 + L1MEd LINE L1 2200 2339 -3876 1804 148 10 26 chr20 44159562 44159873 -22508132 + AluSx SINE Alu 1 306 -6 612 263 138 38 chr20 44159873 44160295 -22507710 + L1MEd LINE L1 2339 2836 -3379 282 263 98 8 chr20 44161030 44161163 -22506842 - L1ME4a LINE L1 -11 6110 5966 333 0 0 0 chr20 44161163 44161200 -22506805 + (CA)n Simple_repeat Simple_repeat 1 37 0 441 302 55 17 chr20 44161269 44161504 -22506501 + L1ME4a LINE L1 5691 5934 -187 254 200 164 9 chr20 44161533 44161643 -22506362 + L1ME4a LINE L1 5992 6118 -3 877 196 83 5 chr20 44161991 44162220 -22505785 - L1PA16 LINE L1 0 6163 5896 1838 138 13 3 chr20 44162305 44162603 -22505402 - AluJb SINE Alu -11 301 1 754 285 68 36 chr20 44163102 44163127 -22504878 + MIR SINE MIR 6 29 -233 2421 66 0 0 chr20 44163127 44163432 -22504573 + AluY SINE Alu 1 305 -6 754 285 68 36 chr20 44163432 44163656 -22504349 + MIR SINE MIR 29 261 -1 265 314 0 0 chr20 44166410 44166480 -22501525 - L2 LINE L2 0 3313 3244 205 246 14 14 chr20 44167894 44167963 -22500042 + G-rich Low_complexity Low_complexity 4 72 0 236 272 33 73 chr20 44168853 44168979 -22499026 + MIR3 SINE MIR 34 155 -53 2119 80 10 13 chr20 44169901 44170200 -22497805 + AluSx SINE Alu 1 298 -14 293 289 52 0 chr20 44170209 44170306 -22497699 + L2 LINE L2 3204 3305 -8 1972 105 3 51 chr20 44171057 44171370 -22496635 + AluSx SINE Alu 1 298 -14 842 251 35 5 chr20 44171424 44171623 -22496382 - MIR SINE MIR -56 206 2 700 254 202 0 chr20 44171739 44172046 -22495959 + L2 LINE L2 2869 3237 -76 506 239 0 44 chr20 44172051 44172231 -22495774 + MER104 DNA Tc2 4 175 -5 318 225 14 0 chr20 44172237 44172308 -22495697 + L2 LINE L2 3242 3313 0 1137 114 34 0 chr20 44172339 44172514 -22495491 - AluSg/x SINE Alu -16 296 116 188 330 76 8 chr20 44172675 44172793 -22495212 - L2 LINE L2 -862 2452 2327 211 298 89 37 chr20 44172935 44173126 -22494879 - L2 LINE L2 -699 2615 2415 1486 166 112 0 chr20 44173219 44173379 -22494626 - AluSx SINE Alu -3 309 168 189 0 0 0 chr20 44173379 44173400 -22494605 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1486 166 112 0 chr20 44173400 44173517 -22494488 - AluSx SINE Alu -144 168 1 973 182 37 27 chr20 44173538 44173725 -22494280 - MIR SINE MIR -51 211 23 458 314 39 13 chr20 44173760 44173989 -22494016 - L2 LINE L2 -955 2359 2125 330 240 185 14 chr20 44175150 44175296 -22492709 + L1ME3A LINE L1 5995 6165 -5 1560 225 123 54 chr20 44175458 44176018 -22491987 + L1MC4a LINE L1 5307 5905 -1903 216 130 0 0 chr20 44176874 44176920 -22491085 + (TC)n Simple_repeat Simple_repeat 1 46 0 285 51 0 0 chr20 44176965 44177004 -22491001 + (TG)n Simple_repeat Simple_repeat 2 40 0 481 319 122 15 chr20 44177004 44177340 -22490665 + L2 LINE L2 1815 2186 -1128 2144 115 3 3 chr20 44177663 44177975 -22490030 - AluSx SINE Alu 0 312 1 317 312 22 74 chr20 44179185 44179416 -22488589 + L2 LINE L2 2195 2413 -901 37 62 0 0 chr20 44179489 44179554 -22488451 + AT_rich Low_complexity Low_complexity 1 65 0 554 201 28 12 chr20 44179616 44179757 -22488248 - MIR SINE MIR -62 146 33 469 199 102 77 chr20 44179886 44180082 -22487923 + MIR SINE MIR 35 235 -27 1949 147 118 18 chr20 44180084 44180473 -22487532 + MSTB1 LTR MaLR 1 428 -4 2183 174 74 0 chr20 44180560 44180952 -22487053 + MSTB LTR MaLR 6 426 0 291 305 115 43 chr20 44181023 44181328 -22486677 - L1ME LINE L1 -293 5828 5502 2043 123 0 10 chr20 44181574 44181876 -22486129 - AluSx SINE Alu -13 299 1 300 238 215 58 chr20 44182196 44182368 -22485637 - MIR SINE MIR -41 221 23 503 223 45 50 chr20 44182544 44182737 -22485268 + MIR3 SINE MIR 7 192 -65 214 283 0 0 chr20 44182849 44182909 -22485096 + T-rich Low_complexity Low_complexity 1 60 0 3102 149 11 24 chr20 44182950 44183202 -22484803 - L1PA16 LINE L1 -1 6165 5911 1995 113 0 0 chr20 44183202 44183484 -22484521 + AluY SINE Alu 30 311 0 3102 149 11 24 chr20 44183484 44183775 -22484230 - L1PA16 LINE L1 -255 5911 5629 2458 66 0 0 chr20 44184086 44184387 -22483618 + AluSq SINE Alu 1 301 -12 2099 100 7 0 chr20 44184486 44184798 -22483207 - AluSx SINE Alu 0 314 1 1098 145 62 36 chr20 44185019 44185212 -22482793 + MER20 DNA MER1_type 22 219 0 2136 116 0 0 chr20 44185408 44185711 -22482294 - AluSg SINE Alu -6 304 2 221 187 122 81 chr20 44186769 44186892 -22481113 + MIR3 SINE MIR 6 133 -75 300 206 56 65 chr20 44187019 44187126 -22480879 - L1ME4a LINE L1 -5 6116 6011 1828 143 0 3 chr20 44187163 44187456 -22480549 - AluSx SINE Alu -9 303 12 2074 114 10 0 chr20 44187945 44188243 -22479762 + AluSq SINE Alu 1 301 -12 2054 112 17 0 chr20 44188250 44188544 -22479461 + AluSx SINE Alu 1 299 -13 286 250 95 78 chr20 44188576 44188692 -22479313 - L2 LINE L2 -10 3303 3186 432 248 222 15 chr20 44188952 44189150 -22478855 - L3 LINE CR1 -50 1527 1289 356 210 86 0 chr20 44189569 44189650 -22478355 - MER5A DNA MER1_type -93 96 9 1958 122 3 0 chr20 44189716 44190002 -22478003 + AluSx SINE Alu 1 287 -25 385 281 45 34 chr20 44190021 44190199 -22477806 - L1M4 LINE L1 -2855 3291 3112 1813 127 15 4 chr20 44190202 44190470 -22477535 + AluSx SINE Alu 14 319 0 276 0 29 0 chr20 44190470 44190505 -22477500 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 523 283 0 0 chr20 44190508 44190628 -22477377 + MER5B DNA MER1_type 59 178 0 491 264 18 55 chr20 44190711 44190877 -22477128 + MER5B DNA MER1_type 14 162 -16 331 228 33 11 chr20 44190933 44191025 -22476980 - MER5B DNA MER1_type -82 96 3 * 404 266 56 28 chr20 44191025 44191155 -22476850 + MIR SINE MIR 29 162 -100 614 224 131 22 chr20 44191246 44191429 -22476576 + MLT1J2 LTR MaLR 65 267 -183 316 278 71 32 chr20 44191436 44191562 -22476443 + MLT1J1 LTR MaLR 316 446 0 643 255 74 55 chr20 44191601 44191702 -22476303 + Charlie8 DNA MER1_type 1 99 -242 2163 115 20 0 chr20 44191702 44191998 -22476007 - AluSx SINE Alu -10 302 1 643 255 74 55 chr20 44191998 44192167 -22475838 + Charlie8 DNA MER1_type 99 276 -65 206 267 13 27 chr20 44192485 44192560 -22475445 + MIR SINE MIR 34 107 -101 319 185 22 0 chr20 44192566 44192658 -22475347 + CT-rich Low_complexity Low_complexity 1 94 0 2294 102 3 0 chr20 44192658 44192952 -22475053 - AluSq SINE Alu -18 295 1 24 0 0 0 chr20 44193167 44193191 -22474814 + AT_rich Low_complexity Low_complexity 1 24 0 345 197 0 0 chr20 44193215 44193281 -22474724 - MLT1B LTR MaLR 0 390 325 1297 227 62 9 chr20 44193309 44193630 -22474375 - MLT1B LTR MaLR -52 338 1 2374 119 3 0 chr20 44193671 44193982 -22474023 + AluSx SINE Alu 1 312 0 1911 168 0 3 chr20 44194274 44194559 -22473446 + AluJb SINE Alu 1 284 -28 298 280 149 24 chr20 44194660 44194828 -22473177 + MIR SINE MIR 74 262 0 723 216 144 88 chr20 44194951 44195166 -22472839 - MER46C DNA MER2_type 0 338 98 2727 29 0 6 chr20 44195166 44195479 -22472526 - AluY SINE Alu 0 311 1 723 216 144 88 chr20 44195479 44195582 -22472423 - MER46C DNA MER2_type -240 98 2 2371 107 3 0 chr20 44195787 44196095 -22471910 + AluSx SINE Alu 1 309 -3 245 115 0 58 chr20 44196191 44196243 -22471762 - MLT1L LTR MaLR -421 194 146 260 267 55 24 chr20 44196414 44196459 -22471546 - L1M4 LINE L1 -852 5294 5252 2145 110 56 31 chr20 44196459 44196814 -22471191 + THE1B LTR MaLR 1 364 0 260 267 55 24 chr20 44196814 44196933 -22471072 - L1M4 LINE L1 -894 5252 5125 809 273 58 76 chr20 44197197 44197335 -22470670 - L2 LINE L2 0 3313 3174 2015 141 3 0 chr20 44197335 44197650 -22470355 + AluSp SINE Alu 1 316 0 809 273 58 76 chr20 44197650 44198096 -22469909 - L2 LINE L2 -139 3174 2738 2234 92 7 0 chr20 44198658 44198983 -22469022 + AluSx SINE Alu 1 327 0 1487 261 70 11 chr20 44199237 44199696 -22468309 + LTR16C LTR ERVL 4 489 -2 1728 146 85 7 chr20 44199878 44200159 -22467846 - AluJb SINE Alu -9 303 1 322 247 72 0 chr20 44200219 44200316 -22467689 + L1MC4 LINE L1 7120 7223 -819 251 305 85 8 chr20 44200328 44200446 -22467559 + L1MC4a LINE L1 7206 7332 -476 476 245 144 81 chr20 44200454 44200836 -22467169 + L1MC4 LINE L1 7258 7614 -428 2069 138 0 3 chr20 44200836 44201125 -22466880 - AluJb SINE Alu -24 288 1 476 245 144 81 chr20 44201125 44201400 -22466605 + L1MC4 LINE L1 7614 8042 0 * 917 272 164 16 chr20 44201387 44201821 -22466184 + L1MC4a LINE L1 5404 5901 -1907 385 278 0 0 chr20 44201822 44201912 -22466093 + L2 LINE L2 3223 3312 -1 427 266 116 12 chr20 44202044 44202217 -22465788 - Charlie8 DNA MER1_type -2226 191 1 448 202 149 22 chr20 44202265 44202554 -22465451 - MLT1J2 LTR MaLR -9 437 84 329 260 13 0 chr20 44202661 44202738 -22465267 - MIR SINE MIR -108 154 77 2128 120 41 126 chr20 44202797 44203064 -22464941 - MSTA LTR MaLR 0 428 217 204 40 0 0 chr20 44203064 44203089 -22464916 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2128 120 41 126 chr20 44203089 44203289 -22464716 - MSTA LTR MaLR -211 217 1 335 250 228 7 chr20 44203882 44204018 -22463987 + MIR SINE MIR 49 214 -48 1101 200 81 8 chr20 44204066 44204301 -22463704 + MIR SINE MIR 6 257 -5 194 365 14 0 chr20 44205895 44205969 -22462036 - MIR3 SINE MIR -37 171 97 780 214 12 12 chr20 44206139 44206307 -22461698 - MER5A DNA MER1_type -8 181 14 448 321 10 31 chr20 44206309 44206505 -22461500 + MIR SINE MIR 70 261 -1 2158 125 0 7 chr20 44206507 44206796 -22461209 - AluSx SINE Alu -15 297 11 668 256 110 13 chr20 44207264 44207491 -22460514 + MIR SINE MIR 2 250 -12 974 280 8 15 chr20 44207677 44207941 -22460064 + MIR SINE MIR 1 262 0 393 273 153 27 chr20 44207942 44208125 -22459880 + MIR SINE MIR 19 224 -38 393 179 137 0 chr20 44208309 44208404 -22459601 + MIR SINE MIR 37 144 -64 696 239 41 32 chr20 44208508 44208726 -22459279 + MIR SINE MIR 43 262 0 295 203 38 0 chr20 44209118 44209197 -22458808 + L2 LINE L2 2725 2806 -508 1824 191 99 20 chr20 44209201 44209657 -22458348 - Charlie4a DNA MER1_type 0 508 17 2136 124 3 23 chr20 44209698 44209826 -22458179 + AluSx SINE Alu 1 130 -182 2304 87 0 0 chr20 44209826 44210103 -22457902 + AluSq SINE Alu 1 277 -36 230 0 33 0 chr20 44210110 44210140 -22457865 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2136 124 3 23 chr20 44210140 44210309 -22457696 + AluSx SINE Alu 136 300 -12 1227 267 80 37 chr20 44210322 44210787 -22457218 + L2 LINE L2 2827 3311 -2 290 96 19 0 chr20 44210830 44210882 -22457123 + L1MC2 LINE L1 6292 6344 0 235 295 13 0 chr20 44210896 44210974 -22457031 - MIR SINE MIR -81 127 49 269 316 9 9 chr20 44211619 44211733 -22456272 + (CA)n Simple_repeat Simple_repeat 1 114 0 192 224 0 0 chr20 44211772 44211839 -22456166 + (CA)n Simple_repeat Simple_repeat 1 67 0 487 311 18 6 chr20 44212005 44212169 -22455836 - MIR3 SINE MIR -22 186 21 395 298 48 16 chr20 44212455 44212579 -22455426 - MIR SINE MIR -116 146 19 450 245 64 80 chr20 44212601 44212730 -22455275 - MIR SINE MIR -25 237 110 2552 93 0 0 chr20 44212730 44213040 -22454965 + AluSx SINE Alu 3 312 0 450 245 64 80 chr20 44213040 44213098 -22454907 - MIR SINE MIR -152 110 53 224 306 117 18 chr20 44213295 44213406 -22454599 + MIR3 SINE MIR 69 190 -18 527 268 34 16 chr20 44213552 44213776 -22454229 + MIR SINE MIR 21 254 -8 1987 143 34 0 chr20 44213856 44214150 -22453855 + AluSx SINE Alu 1 304 -8 365 308 116 7 chr20 44214257 44214403 -22453602 - MIR SINE MIR -99 163 2 395 270 98 18 chr20 44215547 44215710 -22452295 + Charlie8 DNA MER1_type 56 231 -2186 218 234 0 56 chr20 44216146 44216232 -22451773 + CT-rich Low_complexity Low_complexity 1 81 0 204 97 0 0 chr20 44216264 44216295 -22451710 + (TC)n Simple_repeat Simple_repeat 2 32 0 1994 153 0 3 chr20 44216961 44217255 -22450750 - AluSx SINE Alu -9 303 11 212 352 99 7 chr20 44217326 44217468 -22450537 - L2 LINE L2 -44 3228 3074 738 255 80 48 chr20 44217493 44217866 -22450139 + L1MC4a LINE L1 5622 6006 -1802 197 62 0 31 chr20 44218927 44218959 -22449046 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 375 289 102 0 chr20 44218959 44219087 -22448918 - L2 LINE L2 -17 3255 3115 392 322 73 36 chr20 44219286 44219953 -22448052 - L2 LINE L2 -219 3053 2364 1910 134 24 0 chr20 44220176 44220466 -22447539 - AluJo SINE Alu -3 309 13 308 179 36 36 chr20 44220918 44221002 -22447003 + MIR SINE MIR 53 136 -126 2256 119 0 0 chr20 44221030 44221324 -22446681 + AluSx SINE Alu 1 294 -18 28 0 0 0 chr20 44221324 44221352 -22446653 + AT_rich Low_complexity Low_complexity 1 28 0 895 203 184 68 chr20 44221352 44221732 -22446273 - LTR16A1 LTR ERVL -19 438 15 946 251 30 0 chr20 44222135 44222370 -22445635 + MIR SINE MIR 14 255 -7 445 278 14 50 chr20 44222992 44223153 -22444852 + MIR SINE MIR 37 189 -58 437 242 0 0 chr20 44223214 44223305 -22444700 - MIR SINE MIR -65 143 53 2172 105 3 29 chr20 44223495 44223801 -22444204 + AluSx SINE Alu 1 298 -14 197 195 0 0 chr20 44223911 44223952 -22444053 + MIR SINE MIR 58 98 -110 1766 210 7 49 chr20 44223974 44224320 -22443685 - MLT1B LTR MaLR 0 390 62 1526 108 31 0 chr20 44224320 44224542 -22443463 + MER30 DNA MER1_type 2 230 0 1766 210 7 49 chr20 44224542 44224600 -22443405 - MLT1B LTR MaLR -328 62 3 585 266 7 0 chr20 44224608 44224751 -22443254 - MIR SINE MIR -11 251 108 2347 115 0 3 chr20 44224796 44225100 -22442905 + AluSx SINE Alu 1 303 -9 435 205 9 45 chr20 44225107 44225219 -22442786 + MIR SINE MIR 142 249 -13 641 274 45 27 chr20 44225644 44225867 -22442138 + MIR SINE MIR 34 260 -2 483 274 211 30 chr20 44225876 44226146 -22441859 - L2 LINE L2 -1 3312 2994 329 271 31 16 chr20 44226248 44226377 -22441628 - L2 LINE L2 -456 2858 2728 552 224 17 63 chr20 44226380 44226554 -22441451 - MLT1H LTR MaLR 0 549 384 323 276 114 24 chr20 44226641 44226764 -22441241 - L2 LINE L2 -1 3312 3179 269 146 10 146 chr20 44226772 44226868 -22441137 - MLT1H LTR MaLR -455 94 12 1240 281 214 34 chr20 44226893 44227118 -22440887 - L2 LINE L2 -604 2710 2527 2049 111 0 0 chr20 44227118 44227379 -22440626 + AluY SINE Alu 1 261 -50 1240 281 214 34 chr20 44227379 44227579 -22440426 - L2 LINE L2 -787 2527 2364 2169 210 45 34 chr20 44227579 44227633 -22440372 - MLT1F1 LTR MaLR 0 567 515 2915 7 0 0 chr20 44227633 44227938 -22440067 - AluYa5 SINE Alu -6 305 1 2169 210 45 34 chr20 44227938 44228444 -22439561 - MLT1F1 LTR MaLR -52 515 1 1583 173 67 7 chr20 44228450 44228734 -22439271 + AluJb SINE Alu 3 303 -9 1240 281 214 34 chr20 44228734 44229230 -22438775 - L2 LINE L2 -954 2360 1614 384 294 7 7 chr20 44229262 44229398 -22438607 - LTR33 LTR ERVL -4 517 382 430 297 68 18 chr20 44229453 44229672 -22438333 - LTR33 LTR ERVL -283 238 9 531 323 117 6 chr20 44229786 44230145 -22437860 - L2 LINE L2 -1866 1448 1050 797 214 37 27 chr20 44230549 44230736 -22437269 + MIR SINE MIR 7 195 -67 452 235 131 0 chr20 44230735 44230888 -22437117 + L2 LINE L2 2026 2198 -1116 * 2595 240 115 70 chr20 44230912 44231289 -22436716 + L2 LINE L2 966 1324 -1990 352 78 0 0 chr20 44231289 44231340 -22436665 - MADE1 DNA Mariner 0 80 30 2595 240 115 70 chr20 44231340 44231410 -22436595 + L2 LINE L2 1324 1389 -1925 368 213 187 26 chr20 44231410 44231565 -22436440 + MER104 DNA MER2_type 1 180 0 2595 240 115 70 chr20 44231565 44232275 -22435730 + L2 LINE L2 1389 2229 -1085 1628 149 21 14 chr20 44232352 44232661 -22435344 - AluJb SINE Alu 0 311 1 210 250 38 12 chr20 44232988 44233068 -22434937 - L2 LINE L2 -337 2976 2895 235 280 172 38 chr20 44233340 44233497 -22434508 - MER113 DNA MER1_type? -42 479 302 2022 138 6 41 chr20 44233508 44233959 -22434046 + AluSx SINE Alu 1 440 0 352 255 0 20 chr20 44233972 44234074 -22433931 - MER113 DNA MER1_type? -218 303 204 785 258 12 42 chr20 44234137 44234377 -22433628 - L2 LINE L2 0 3313 3081 1374 90 0 2 chr20 44234471 44234735 -22433270 - AluSq SINE Alu 0 322 1 1905 255 74 39 chr20 44234745 44235340 -22432665 - L2 LINE L2 -244 3069 2440 2477 107 0 0 chr20 44235340 44235650 -22432355 + AluSx SINE Alu 1 310 -2 1905 255 74 39 chr20 44235650 44235829 -22432176 - L2 LINE L2 -873 2440 2269 2171 146 0 0 chr20 44235848 44236149 -22431856 - AluSx SINE Alu -11 301 1 257 278 93 0 chr20 44236232 44236329 -22431676 - MER113 DNA MER1_type? -415 106 1 186 103 0 0 chr20 44236976 44237005 -22431000 + (GA)n Simple_repeat Simple_repeat 2 30 0 784 188 0 0 chr20 44238114 44238247 -22429758 + FLAM_C SINE Alu 1 133 0 2312 98 10 0 chr20 44238550 44238847 -22429158 + AluSg SINE Alu 1 300 -10 306 0 0 0 chr20 44239138 44239172 -22428833 + (CA)n Simple_repeat Simple_repeat 2 35 0 577 307 0 6 chr20 44239181 44239344 -22428661 - ERVL LTR ERVL -365 5399 5238 3894 273 67 33 chr20 44239422 44241321 -22426684 - ERVL LTR ERVL -657 5107 3275 744 183 15 0 chr20 44241321 44241452 -22426553 + FLAM_A SINE Alu 1 133 0 752 177 8 0 chr20 44241332 44241462 -22426543 + FLAM_A SINE Alu 12 142 0 * 3894 273 67 33 chr20 44241452 44241862 -22426143 - ERVL LTR ERVL -2489 3275 2881 2308 118 0 0 chr20 44241862 44242159 -22425846 + AluSx SINE Alu 1 297 -15 3894 273 67 33 chr20 44242159 44242354 -22425651 - ERVL LTR ERVL -2883 2881 2422 690 273 19 63 chr20 44242353 44242624 -22425381 - ERVL LTR ERVL -3448 2316 2058 * 940 76 0 0 chr20 44242668 44242799 -22425206 - L1MA3 LINE L1 -34 6271 6141 2056 109 32 3 chr20 44242802 44243086 -22424919 - AluSx SINE Alu -20 292 1 769 170 0 57 chr20 44243094 44243235 -22424770 - AluJo SINE Alu -178 134 2 6823 136 24 14 chr20 44243244 44244484 -22423521 - L1 LINE L1 -1272 4874 3623 316 320 32 56 chr20 44244499 44244750 -22423255 - ERVL LTR ERVL -3650 2030 1799 2618 165 55 20 chr20 44244765 44245220 -22422785 + MER70A LTR ERVL 1 471 -1 2142 120 60 26 chr20 44245225 44245574 -22422431 - THE1B LTR MaLR -2 362 2 333 364 14 0 chr20 44245829 44245972 -22422033 - ERVL LTR ERVL -4285 1479 1335 678 198 16 0 chr20 44246030 44246156 -22421849 + FLAM_A SINE Alu 2 129 -4 1312 295 18 10 chr20 44247454 44247837 -22420168 + LTR16A LTR ERVL 53 438 -12 414 286 14 61 chr20 44247880 44248045 -22419960 - MIR SINE MIR -63 145 35 2154 116 20 0 chr20 44248753 44249046 -22418959 + AluSg SINE Alu 4 302 -8 536 165 0 0 chr20 44249056 44249141 -22418864 + FLAM_C SINE Alu 37 121 -22 562 252 41 50 chr20 44249297 44249515 -22418490 - MLT1J2 LTR MaLR -234 216 1 2173 105 10 7 chr20 44249574 44249868 -22418137 + AluSq SINE Alu 1 295 -18 460 161 20 7 chr20 44249875 44250024 -22417981 + GA-rich Low_complexity Low_complexity 1 151 0 185 265 184 44 chr20 44250045 44250181 -22417824 - MIR3 SINE MIR -24 184 30 1198 123 0 18 chr20 44250183 44250354 -22417651 - FRAM SINE Alu -9 167 1 250 235 20 20 chr20 44250745 44250818 -22417187 + MIR SINE MIR 96 167 -95 * 281 213 276 0 chr20 44250799 44250926 -22417079 - MIR SINE MIR 0 262 101 2131 115 0 7 chr20 44251124 44251411 -22416594 - AluSq SINE Alu -28 285 1 3281 171 13 88 chr20 44251697 44251884 -22416121 - LTR8 LTR ERV1 0 691 492 2319 115 0 10 chr20 44251884 44252198 -22415807 + AluSx SINE Alu 2 312 0 3281 171 13 88 chr20 44252198 44252757 -22415248 - LTR8 LTR ERV1 -199 492 1 2387 100 3 0 chr20 44253137 44253446 -22414559 + AluSp SINE Alu 1 310 -3 403 252 74 44 chr20 44253474 44253609 -22414396 - MIR SINE MIR -111 151 13 2359 111 0 0 chr20 44253791 44254097 -22413908 - AluSx SINE Alu -6 306 1 1558 136 147 19 chr20 44254515 44254773 -22413232 - AluSx SINE Alu -16 296 6 2153 117 3 43 chr20 44254945 44255271 -22412734 - AluSq SINE Alu 0 313 1 728 193 106 0 chr20 44255281 44255442 -22412563 - MIR SINE MIR -43 219 42 316 282 30 23 chr20 44255580 44255711 -22412294 + L2 LINE L2 3138 3269 -3 230 279 81 44 chr20 44255727 44255863 -22412142 - MIR SINE MIR -109 153 13 280 250 78 23 chr20 44255958 44256086 -22411919 - L1MC/D LINE L1 -2057 5751 5617 2283 92 0 0 chr20 44256103 44256410 -22411595 - AluSx SINE Alu 0 307 1 4391 118 114 129 chr20 44256419 44257845 -22410160 + pTR5 LTR ERV1 743 2438 0 1932 147 14 0 chr20 44258080 44258373 -22409632 + AluSx SINE Alu 1 297 -15 493 202 44 18 chr20 44258696 44258810 -22409195 - MIR3 SINE MIR -42 166 50 2060 186 48 3 chr20 44258845 44259222 -22408783 - MSTD LTR MaLR -2 394 1 420 350 78 39 chr20 44259376 44259659 -22408346 + L2 LINE L2 2926 3219 -53 202 235 247 0 chr20 44260723 44260804 -22407201 - MIR SINE MIR -113 149 49 2182 112 32 0 chr20 44261099 44261384 -22406621 - AluSx SINE Alu -18 294 1 857 147 0 16 chr20 44262362 44262491 -22405514 - FLAM_C SINE Alu -16 127 1 321 68 0 0 chr20 44262586 44262630 -22405375 + (CCAA)n Simple_repeat Simple_repeat 2 45 0 2525 64 3 0 chr20 44263009 44263307 -22404698 + AluSp SINE Alu 1 299 -14 2275 112 7 0 chr20 44263356 44263659 -22404346 - AluSx SINE Alu -7 305 1 2255 99 0 0 chr20 44264883 44265194 -22402811 - AluSx SINE Alu 0 311 1 507 224 122 61 chr20 44265223 44265274 -22402731 - MIR SINE MIR -49 213 167 2500 46 0 0 chr20 44265274 44265587 -22402418 + AluY SINE Alu 1 313 0 507 224 122 61 chr20 44265587 44265730 -22402275 - MIR SINE MIR -95 167 6 503 261 97 24 chr20 44265750 44265915 -22402090 - MIR SINE MIR -3 259 83 1884 162 3 22 chr20 44265995 44266310 -22401695 - AluJo SINE Alu -3 309 1 248 248 174 28 chr20 44266361 44266470 -22401535 + MIR3 SINE MIR 38 162 -46 1351 71 24 6 chr20 44266470 44266638 -22401367 - AluSq SINE Alu -17 296 126 2359 119 0 0 chr20 44266638 44266948 -22401057 - AluSx SINE Alu -2 310 1 333 252 148 17 chr20 44267032 44267147 -22400858 + MIR3 SINE MIR 51 180 -28 199 300 0 20 chr20 44267118 44267168 -22400837 + L3 LINE CR1 1525 1573 -4 * 257 260 26 85 chr20 44268944 44269119 -22398886 + MIR SINE MIR 43 207 -55 21 36 0 0 chr20 44269144 44269172 -22398833 + AT_rich Low_complexity Low_complexity 1 28 0 1761 153 0 21 chr20 44269185 44269466 -22398539 - AluJo SINE Alu -36 276 2 29 0 0 0 chr20 44269468 44269497 -22398508 + AT_rich Low_complexity Low_complexity 1 29 0 1971 104 0 92 chr20 44269497 44269814 -22398191 - AluSx SINE Alu -22 290 3 1211 173 14 18 chr20 44269858 44270078 -22397927 + AluJo SINE Alu 89 307 -5 231 200 0 0 chr20 44270251 44270296 -22397709 - MLT1D LTR MaLR -2 503 459 929 109 0 36 chr20 44270311 44270449 -22397556 - FLAM_C SINE Alu 0 133 1 411 80 0 0 chr20 44270543 44270593 -22397412 + Alu SINE Alu 2 51 -260 1601 124 21 8 chr20 44270600 44270834 -22397171 - AluSx SINE Alu -75 237 1 258 224 201 0 chr20 44271273 44271348 -22396657 + MIR SINE MIR 6 88 -120 192 77 0 0 chr20 44271547 44271573 -22396432 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 1218 119 6 6 chr20 44271587 44271763 -22396242 - FRAM SINE Alu 0 176 1 1605 172 111 3 chr20 44271896 44272006 -22395999 - MER63 DNA MER1_type -1 1059 962 2046 145 0 3 chr20 44272006 44272302 -22395703 + AluJo SINE Alu 1 295 -17 1605 172 111 3 chr20 44272302 44272551 -22395454 - MER63 DNA MER1_type -98 962 661 848 140 84 23 chr20 44272590 44272696 -22395309 - MER63 DNA MER1_type -815 246 148 2009 152 0 31 chr20 44272696 44273018 -22394987 - AluJo SINE Alu 0 312 1 848 140 84 23 chr20 44273018 44273125 -22394880 - MER63 DNA MER1_type -913 148 20 1606 124 0 0 chr20 44273126 44273344 -22394661 - AluSg/x SINE Alu -2 308 91 2532 50 3 3 chr20 44273381 44273684 -22394321 - AluY SINE Alu -8 303 1 2454 100 0 0 chr20 44273798 44274108 -22393897 + AluSx SINE Alu 3 312 0 579 221 29 14 chr20 44274152 44274292 -22393713 + MER112 DNA MER1_type 113 254 -6 4104 174 11 10 chr20 44274472 44275136 -22392869 + L1MA7 LINE L1 4494 5161 -985 2197 120 0 0 chr20 44275136 44275428 -22392577 + AluSx SINE Alu 1 292 -20 4104 174 11 10 chr20 44275428 44275596 -22392409 + L1MA7 LINE L1 5161 5327 -819 1050 177 0 6 chr20 44275596 44275771 -22392234 + FRAM SINE Alu 1 169 -7 4999 144 8 52 chr20 44275771 44276419 -22391586 + L1MA7 LINE L1 5325 5913 -378 2388 91 0 19 chr20 44276419 44276737 -22391268 + AluSx SINE Alu 1 312 0 4999 144 8 52 chr20 44276737 44277099 -22390906 + L1MA7 LINE L1 5913 6290 -1 194 262 0 16 chr20 44277109 44277170 -22390835 - L2 LINE L2 -76 3237 3178 281 313 0 0 chr20 44277177 44277241 -22390764 - L2 LINE L2 -2 3270 3207 1287 166 66 118 chr20 44277292 44277375 -22390630 + L1MC5 LINE L1 6741 6827 -1134 790 244 25 106 chr20 44277375 44277781 -22390224 + MER93b LTR ERV1 1 373 0 1287 166 66 118 chr20 44277781 44278103 -22389902 + L1MC5 LINE L1 6827 7122 -839 2143 108 0 65 chr20 44278103 44278427 -22389578 + AluSg SINE Alu 1 303 -7 1287 166 66 118 chr20 44278427 44278477 -22389528 + L1MC5 LINE L1 7122 7173 -788 1373 164 90 90 chr20 44278572 44278884 -22389121 - AluJo SINE Alu 0 312 1 22 0 0 0 chr20 44278887 44278909 -22389096 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr20 44278940 44278972 -22389033 + AT_rich Low_complexity Low_complexity 1 32 0 250 190 51 0 chr20 44279338 44279417 -22388588 + (TA)n Simple_repeat Simple_repeat 1 83 0 1520 163 34 41 chr20 44279518 44279661 -22388344 + AluJo SINE Alu 1 143 -169 2108 143 3 0 chr20 44279661 44279969 -22388036 + AluSx SINE Alu 1 309 -3 1520 163 34 41 chr20 44279969 44280120 -22387885 + AluJo SINE Alu 143 293 -19 2227 112 0 3 chr20 44280236 44280531 -22387474 + AluSx SINE Alu 1 294 -18 449 213 0 0 chr20 44280542 44280636 -22387369 + AluJ/FRAM SINE Alu 218 311 -1 553 229 25 32 chr20 44280708 44280865 -22387140 + L2 LINE L2 3139 3294 -19 2490 75 0 0 chr20 44280904 44281198 -22386807 - AluY SINE Alu -17 294 1 25 31 0 0 chr20 44281253 44281285 -22386720 + AT_rich Low_complexity Low_complexity 1 32 0 2644 50 0 0 chr20 44281286 44281583 -22386422 + AluY SINE Alu 1 297 -14 317 248 120 43 chr20 44281740 44281857 -22386148 - L2 LINE L2 -209 3063 2938 1641 128 25 64 chr20 44282441 44282587 -22385418 + AluJo SINE Alu 1 132 -180 2147 137 3 0 chr20 44282587 44282893 -22385112 + AluSx SINE Alu 1 307 -5 1641 128 25 64 chr20 44282893 44283028 -22384977 + AluJo SINE Alu 132 271 -41 1889 129 14 4 chr20 44283028 44283306 -22384699 + AluJo SINE Alu 11 291 -21 2147 136 0 3 chr20 44283315 44283623 -22384382 + AluSx SINE Alu 1 307 -5 39 0 0 0 chr20 44283627 44283666 -22384339 + AT_rich Low_complexity Low_complexity 1 39 0 1418 139 55 40 chr20 44283666 44283940 -22384065 + AluJo SINE Alu 1 278 -34 239 79 26 0 chr20 44283944 44283982 -22384023 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 181 200 0 100 chr20 44284013 44284063 -22383942 - MIR SINE MIR -97 165 121 25 65 0 0 chr20 44284203 44284249 -22383756 + GC_rich Low_complexity Low_complexity 1 46 0 1775 149 0 11 chr20 44285016 44285297 -22382708 - AluSx SINE Alu -3 309 32 2017 117 34 10 chr20 44285308 44285599 -22382406 - AluSx SINE Alu -14 298 1 367 309 8 0 chr20 44285786 44285912 -22382093 - L1M4 LINE L1 -1457 4689 4563 192 77 0 0 chr20 44286013 44286039 -22381966 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 356 306 24 8 chr20 44286052 44286176 -22381829 - MIR SINE MIR -110 152 27 892 158 0 0 chr20 44286543 44286676 -22381329 + FLAM_C SINE Alu 1 133 0 640 204 6 52 chr20 44286684 44286856 -22381149 - L1ME3 LINE L1 -108 6054 5891 301 249 64 88 chr20 44286891 44286953 -22381052 - MIR SINE MIR -44 218 156 1728 166 18 21 chr20 44286953 44287259 -22380746 - AluJb SINE Alu 0 305 1 301 249 64 88 chr20 44287259 44287342 -22380663 - MIR SINE MIR -106 156 75 405 282 29 0 chr20 44287596 44287699 -22380306 + MIR3 SINE MIR 51 156 -52 30 27 0 0 chr20 44287767 44287804 -22380201 + AT_rich Low_complexity Low_complexity 1 37 0 2139 84 0 65 chr20 44287904 44288212 -22379793 + AluSq SINE Alu 2 289 -24 189 0 0 0 chr20 44288213 44288234 -22379771 + (TA)n Simple_repeat Simple_repeat 2 22 0 2380 90 3 3 chr20 44288418 44288718 -22379287 + AluSp SINE Alu 1 300 -13 553 248 50 6 chr20 44288794 44288955 -22379050 + MIR3 SINE MIR 26 193 -15 2158 123 3 7 chr20 44289005 44289307 -22378698 - AluSx SINE Alu -11 301 1 673 315 47 13 chr20 44289329 44289564 -22378441 + MIR SINE MIR 20 262 0 1053 238 60 12 chr20 44289576 44289824 -22378181 - MIR SINE MIR -2 260 1 1610 205 7 7 chr20 44289999 44290301 -22377704 + AluJo SINE Alu 3 304 -8 1753 114 114 4 chr20 44290303 44290595 -22377410 + AluSq SINE Alu 1 320 0 737 234 56 25 chr20 44290845 44291042 -22376963 + MIR SINE MIR 30 232 -30 210 306 16 0 chr20 44291199 44291261 -22376744 + (TG)n Simple_repeat Simple_repeat 2 64 0 369 250 62 56 chr20 44291342 44291486 -22376519 + MIR SINE MIR 89 233 -29 233 337 12 0 chr20 44291708 44291794 -22376211 - MIR SINE MIR -67 141 55 285 29 0 0 chr20 44292298 44292332 -22375673 + (CA)n Simple_repeat Simple_repeat 2 35 0 370 290 0 0 chr20 44292384 44292484 -22375521 + (CA)n Simple_repeat Simple_repeat 2 101 0 726 251 67 20 chr20 44292484 44292679 -22375326 - MIR SINE MIR -11 251 48 1204 151 0 0 chr20 44292812 44292984 -22375021 + AluJb SINE Alu 129 300 -12 1316 105 130 5 chr20 44292986 44293186 -22374819 + AluSg/x SINE Alu 86 310 -2 604 285 95 5 chr20 44293224 44293424 -22374581 + MIR SINE MIR 33 250 -12 211 278 40 29 chr20 44293953 44294126 -22373879 + (TCTCTG)n Simple_repeat Simple_repeat 5 179 0 * 323 291 17 8 chr20 44294016 44294133 -22373872 + CT-rich Low_complexity Low_complexity 2 119 0 208 147 0 0 chr20 44295048 44295082 -22372923 - MIR SINE MIR -110 152 119 291 164 91 0 chr20 44295164 44295219 -22372786 - MIR SINE MIR -111 151 92 427 246 0 93 chr20 44295767 44295950 -22372055 - L2 LINE L2 -41 3272 3107 2186 95 34 3 chr20 44296258 44296553 -22371452 + AluSq SINE Alu 1 304 -9 300 254 155 21 chr20 44296896 44297038 -22370967 + L1MC4a LINE L1 5761 5921 -1887 336 24 0 0 chr20 44297048 44297089 -22370916 + (TG)n Simple_repeat Simple_repeat 2 42 0 2108 121 0 17 chr20 44297251 44297414 -22370591 - AluSx SINE Alu -16 296 139 2270 129 0 0 chr20 44297414 44297723 -22370282 - AluSq SINE Alu -4 309 1 2108 121 0 17 chr20 44297723 44297856 -22370149 - AluSx SINE Alu -173 139 5 1727 133 30 67 chr20 44298002 44298302 -22369703 + AluJb SINE Alu 22 310 -2 356 300 50 8 chr20 44298415 44298535 -22369470 + MIR3 SINE MIR 13 137 -71 605 252 7 33 chr20 44298808 44298959 -22369046 - L2 LINE L2 0 3313 3167 2210 128 0 13 chr20 44299071 44299384 -22368621 + AluSx SINE Alu 1 309 -3 289 313 93 0 chr20 44299465 44299589 -22368416 + MIR3 SINE MIR 42 181 -27 2174 128 0 7 chr20 44300138 44300436 -22367569 + AluSx SINE Alu 1 296 -16 353 266 130 43 chr20 44300612 44300796 -22367209 - MIR SINE MIR 0 262 63 773 158 30 0 chr20 44301152 44301285 -22366720 - AluSg/x SINE Alu 0 309 173 21 36 0 0 chr20 44301286 44301314 -22366691 + AT_rich Low_complexity Low_complexity 1 28 0 1490 198 6 44 chr20 44301324 44301469 -22366536 + AluJo SINE Alu 1 150 -162 2249 105 3 0 chr20 44301469 44301764 -22366241 + AluY SINE Alu 1 296 -15 1490 198 6 44 chr20 44301764 44301937 -22366068 + AluJo SINE Alu 150 307 -5 2120 129 7 3 chr20 44301968 44302271 -22365734 + AluSx SINE Alu 1 304 -8 507 93 221 0 chr20 44302307 44302393 -22365612 + HY1 scRNA scRNA 1 105 -7 238 232 73 73 chr20 44302402 44302553 -22365452 - MER112 DNA MER1_type -92 168 18 1416 172 73 7 chr20 44302990 44303263 -22364742 + AluJo SINE Alu 1 291 -21 2242 133 0 0 chr20 44303279 44303588 -22364417 - AluSx SINE Alu -3 309 1 1903 151 27 3 chr20 44303590 44303882 -22364123 - AluJo SINE Alu -13 299 1 2109 131 0 0 chr20 44304328 44304645 -22363360 + AluSx SINE Alu 1 317 0 1955 141 3 20 chr20 44304671 44304977 -22363028 - AluJo SINE Alu -1 311 11 449 268 36 29 chr20 44305126 44305264 -22362741 - MIR SINE MIR -122 140 2 709 143 0 18 chr20 44305423 44305535 -22362470 - AluJb SINE Alu -4 308 199 448 205 298 12 chr20 44305587 44305748 -22362257 + MIR SINE MIR 8 214 -48 279 208 62 0 chr20 44305873 44305969 -22362036 + CT-rich Low_complexity Low_complexity 1 102 0 1535 173 32 42 chr20 44305969 44306282 -22361723 - AluJb SINE Alu -2 310 1 223 224 153 51 chr20 44306293 44306337 -22361668 + MIR SINE MIR 151 189 -73 1805 112 93 0 chr20 44306337 44306658 -22361347 + AluSx SINE Alu 1 345 0 223 224 153 51 chr20 44306658 44306710 -22361295 + MIR SINE MIR 189 258 -4 236 344 0 0 chr20 44306932 44306996 -22361009 + L2 LINE L2 3209 3272 0 2409 109 0 0 chr20 44307256 44307568 -22360437 + AluSx SINE Alu 1 312 0 1457 153 4 33 chr20 44307700 44307941 -22360064 + AluJo SINE Alu 1 234 -78 207 0 0 0 chr20 44307958 44307981 -22360024 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 230 233 68 27 chr20 44307993 44308066 -22359939 - MIR SINE MIR -78 130 55 714 198 0 0 chr20 44308567 44308683 -22359322 + AluJb SINE Alu 3 118 -194 186 43 0 0 chr20 44308688 44308711 -22359294 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2337 104 3 0 chr20 44308790 44309099 -22358906 + AluSx SINE Alu 3 312 0 389 314 44 7 chr20 44309276 44309413 -22358592 - MIR3 SINE MIR -52 156 15 293 186 49 59 chr20 44309466 44309568 -22358437 + (TCTCTG)n Simple_repeat Simple_repeat 2 102 0 206 250 67 0 chr20 44310061 44310121 -22357884 - MIR SINE MIR -108 154 91 2093 152 3 0 chr20 44310154 44310463 -22357542 + AluSx SINE Alu 1 310 -2 2375 95 3 0 chr20 44310615 44310920 -22357085 + AluSq SINE Alu 3 308 -5 224 240 20 0 chr20 44310932 44310982 -22357023 + MIR SINE MIR 106 156 -106 216 310 13 26 chr20 44311095 44311185 -22356820 + MIR SINE MIR 20 108 -100 2128 139 0 0 chr20 44311282 44311577 -22356428 - AluSx SINE Alu -17 295 1 21 36 0 0 chr20 44311580 44311608 -22356397 + AT_rich Low_complexity Low_complexity 1 28 0 1893 96 77 0 chr20 44311613 44311916 -22356089 - AluSg SINE Alu 0 323 1 534 239 94 0 chr20 44312530 44312647 -22355358 + L2 LINE L2 3181 3308 -5 212 290 48 0 chr20 44312662 44312724 -22355281 + MIR SINE MIR 70 134 -128 294 320 47 23 chr20 44313929 44314101 -22353904 + L1MC4a LINE L1 5727 5902 -1906 551 223 99 12 chr20 44314644 44314814 -22353191 + MIR SINE MIR 20 200 -62 286 224 0 45 chr20 44315623 44315690 -22352315 + MIR SINE MIR 82 145 -63 192 77 0 0 chr20 44315715 44315741 -22352264 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 2099 131 0 3 chr20 44315796 44316121 -22351884 + AluSx SINE Alu 1 324 0 330 267 35 0 chr20 44316249 44316335 -22351670 + MIR SINE MIR 170 258 -4 461 312 7 22 chr20 44316505 44316643 -22351362 + L2 LINE L2 3136 3271 -1 394 300 27 65 chr20 44316652 44316915 -22351090 - MLT1L LTR MaLR -125 490 238 1013 172 11 5 chr20 44317050 44317236 -22350769 - MER20 DNA MER1_type -2 217 31 215 327 36 27 chr20 44317535 44317645 -22350360 + L2 LINE L2 3162 3272 0 364 223 0 30 chr20 44317684 44317850 -22350155 + (TGGA)n Simple_repeat Simple_repeat 1 161 0 284 258 13 13 chr20 44317892 44318051 -22349954 + (TGGA)n Simple_repeat Simple_repeat 3 161 0 315 223 214 9 chr20 44318283 44318395 -22349610 + MIR SINE MIR 63 197 -65 425 277 96 42 chr20 44318628 44318794 -22349211 + MER5B DNA MER1_type 4 178 0 225 352 0 0 chr20 44318895 44318966 -22349039 - L2 LINE L2 -1 3271 3201 757 178 0 103 chr20 44318973 44319197 -22348808 + AluSc SINE Alu 125 309 0 380 257 52 100 chr20 44319223 44319472 -22348533 - L2 LINE L2 -115 3157 2921 2261 95 6 38 chr20 44319594 44319910 -22348095 + AluSq SINE Alu 1 306 -7 409 352 92 9 chr20 44320013 44320240 -22347765 - MIR SINE MIR -12 250 5 833 178 40 64 chr20 44320265 44320307 -22347698 + MIR SINE MIR 66 108 -154 2255 98 0 44 chr20 44320307 44320624 -22347381 - AluSx SINE Alu -9 303 1 833 178 40 64 chr20 44320624 44320783 -22347222 + MIR SINE MIR 108 262 0 182 306 90 36 chr20 44321060 44321171 -22346834 + MIR SINE MIR 19 135 -73 1798 131 74 0 chr20 44321175 44321458 -22346547 - AluSx SINE Alu -8 304 1 813 135 8 8 chr20 44321675 44321808 -22346197 - FLAM_A SINE Alu 0 133 1 2287 110 0 0 chr20 44321935 44322236 -22345769 - AluSg1 SINE Alu -8 301 1 407 220 24 11 chr20 44322343 44322499 -22345506 - MLT1J2 LTR MaLR -249 160 57 1521 180 29 41 chr20 44322622 44322938 -22345067 - AluJo SINE Alu 0 312 1 415 236 38 25 chr20 44322956 44323113 -22344892 + L1MC4 LINE L1 7883 8041 -1 1887 152 0 0 chr20 44323193 44323470 -22344535 + AluJb SINE Alu 1 277 -35 320 178 0 14 chr20 44323526 44323599 -22344406 - L1ME3A LINE L1 -8 6162 6091 416 150 9 35 chr20 44323599 44323712 -22344293 - MER112 DNA MER1_type -79 181 72 194 216 297 0 chr20 44323732 44323806 -22344199 - MIR SINE MIR -1 261 166 2348 112 0 0 chr20 44323807 44324111 -22343894 + AluSx SINE Alu 1 304 -8 22 35 0 0 chr20 44324235 44324264 -22343741 + AT_rich Low_complexity Low_complexity 1 29 0 209 231 0 19 chr20 44324475 44324522 -22343483 - MIR SINE MIR -28 234 188 2541 67 3 0 chr20 44324522 44324822 -22343183 + AluSp SINE Alu 1 301 -12 2292 99 10 0 chr20 44324832 44325124 -22342881 + AluSc SINE Alu 1 295 -14 601 209 9 0 chr20 44325135 44325240 -22342765 + FLAM_C SINE Alu 2 107 -36 180 0 0 0 chr20 44325240 44325260 -22342745 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 576 273 35 7 chr20 44325261 44325404 -22342601 - MIR SINE MIR -69 193 47 251 200 0 0 chr20 44325534 44325594 -22342411 + L1MC4 LINE L1 6644 6703 -1339 213 39 0 0 chr20 44325603 44325629 -22342376 + (TA)n Simple_repeat Simple_repeat 1 26 0 2189 144 0 0 chr20 44325629 44325935 -22342070 - AluSx SINE Alu -6 306 1 190 169 17 102 chr20 44326011 44326070 -22341935 + MIR SINE MIR 126 179 -83 310 172 0 162 chr20 44326326 44326425 -22341580 + HAL1 LINE L1 2258 2340 -167 2470 80 6 10 chr20 44326434 44326747 -22341258 + AluSq SINE Alu 1 312 -1 767 229 12 18 chr20 44326751 44326917 -22341088 + FRAM SINE Alu 1 165 -1 1390 249 73 76 chr20 44327055 44327133 -22340872 + L2 LINE L2 2718 2795 -518 1447 129 218 0 chr20 44327133 44327381 -22340624 - AluSx SINE Alu 0 302 1 1390 249 73 76 chr20 44327381 44327483 -22340522 + L2 LINE L2 2795 2896 -417 2484 70 0 3 chr20 44327483 44327795 -22340210 - AluY SINE Alu 0 311 1 1390 249 73 76 chr20 44327795 44328196 -22339809 + L2 LINE L2 2896 3313 0 254 314 78 10 chr20 44328617 44328719 -22339286 + MIR3 SINE MIR 52 160 -48 1706 102 0 8 chr20 44328736 44328971 -22339034 - AluSg/x SINE Alu -3 309 77 244 128 0 0 chr20 44328971 44329010 -22338995 + Alu SINE Alu 99 137 -165 2097 117 17 3 chr20 44329011 44329310 -22338695 + AluSx SINE Alu 1 303 -9 362 152 11 54 chr20 44329641 44329733 -22338272 + Charlie5 DNA MER1_type 2537 2624 0 519 283 157 9 chr20 44330365 44330588 -22337417 + MIR SINE MIR 6 261 -1 1631 174 0 76 chr20 44330625 44330942 -22337063 - AluJo SINE Alu -19 293 1 2077 122 13 22 chr20 44331146 44331458 -22336547 - AluSx SINE Alu -3 309 1 4909 111 14 75 chr20 44331462 44331937 -22336068 - L1PA16 LINE L1 -10 6156 5654 2403 95 0 0 chr20 44331937 44332232 -22335773 - AluSx SINE Alu -17 295 1 4909 111 14 75 chr20 44332232 44332949 -22335056 - L1PA16 LINE L1 -512 5654 5080 310 82 0 0 chr20 44332958 44333007 -22334998 - Alu SINE Alu -2 300 252 400 216 0 0 chr20 44333020 44333094 -22334911 - MIR SINE MIR -81 127 54 261 306 24 0 chr20 44333176 44333261 -22334744 + MER103 DNA DNA 3 89 -77 2219 97 0 64 chr20 44333433 44333744 -22334261 + AluSg SINE Alu 1 291 -19 272 276 0 26 chr20 44333904 44334020 -22333985 - L1MC5 LINE L1 -36 7925 7813 198 0 0 0 chr20 44334025 44334047 -22333958 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 924 105 15 15 chr20 44334388 44334521 -22333484 + AluJb SINE Alu 1 133 -179 2346 158 18 0 chr20 44334533 44334920 -22333085 + L1PA16 LINE L1 5767 6160 -6 1666 111 0 0 chr20 44334949 44335165 -22332840 + AluSq SINE Alu 1 216 -97 483 169 0 0 chr20 44335230 44335319 -22332686 - AluS SINE Alu 0 311 223 297 325 60 12 chr20 44335366 44335532 -22332473 - L1ME LINE L1 -511 5659 5486 357 293 109 29 chr20 44335566 44335733 -22332272 - L1ME LINE L1 -737 5427 5246 2275 115 3 0 chr20 44335740 44336036 -22331969 - AluSx SINE Alu -15 297 1 4664 142 30 55 chr20 44336037 44336174 -22331831 - L1MB3 LINE L1 -48 6135 5996 1621 70 0 91 chr20 44336174 44336417 -22331588 + AluSg/x SINE Alu 92 312 0 4664 142 30 55 chr20 44336417 44337006 -22330999 - L1MB3 LINE L1 -187 5996 5394 1965 139 0 60 chr20 44337006 44337190 -22330815 - AluSx SINE Alu 0 312 155 2532 87 0 0 chr20 44337190 44337500 -22330505 - AluSg SINE Alu 0 310 1 1965 139 0 60 chr20 44337500 44337647 -22330358 - AluSx SINE Alu -157 155 1 4664 142 30 55 chr20 44337647 44337767 -22330238 - L1MB3 LINE L1 -789 5394 5272 1832 166 14 7 chr20 44337767 44338062 -22329943 - AluJo SINE Alu -15 297 1 4664 142 30 55 chr20 44338062 44338447 -22329558 - L1MB3 LINE L1 -911 5272 4924 578 311 49 13 chr20 44338517 44338742 -22329263 - L3 LINE CR1 -54 1523 1291 2010 135 10 16 chr20 44338748 44339051 -22328954 - AluSx SINE Alu -11 301 1 2239 107 0 0 chr20 44339089 44339378 -22328627 - AluSx SINE Alu -22 290 2 520 258 129 24 chr20 44339410 44339619 -22328386 - MIR SINE MIR -28 234 4 352 302 156 72 chr20 44339627 44339698 -22328307 - L3 LINE CR1 -351 1226 1162 2278 112 0 16 chr20 44339698 44340010 -22327995 - AluSc SINE Alu -2 307 1 352 302 156 72 chr20 44340010 44340355 -22327650 - L3 LINE CR1 -415 1162 763 1793 158 17 7 chr20 44340355 44340652 -22327353 + AluJb SINE Alu 1 300 -12 352 302 156 72 chr20 44340652 44340707 -22327298 - L3 LINE CR1 -814 763 714 945 286 8 0 chr20 44340709 44340947 -22327058 - MIR SINE MIR -21 241 2 2158 125 0 10 chr20 44341018 44341322 -22326683 - AluSx SINE Alu -11 301 1 2415 89 0 0 chr20 44341326 44341619 -22326386 - AluSp SINE Alu -20 293 1 396 254 193 4 chr20 44341640 44341904 -22326101 - MER113 DNA MER1_type? -207 314 1 350 291 17 8 chr20 44341907 44342024 -22325981 - MLT1I LTR MaLR -4 405 288 719 223 18 12 chr20 44342079 44342245 -22325760 - MLT1I LTR MaLR -229 180 14 252 0 0 0 chr20 44342528 44342556 -22325449 + (T)n Simple_repeat Simple_repeat 1 28 0 511 147 86 78 chr20 44342807 44342923 -22325082 + FLAM_C SINE Alu 2 118 -25 2028 146 10 0 chr20 44342939 44343233 -22324772 - AluSx SINE Alu -11 301 5 22 35 0 0 chr20 44343239 44343268 -22324737 + AT_rich Low_complexity Low_complexity 1 29 0 2255 96 31 0 chr20 44343326 44343619 -22324386 - AluSx SINE Alu -10 302 1 2287 121 3 0 chr20 44343628 44343935 -22324070 - AluSp SINE Alu -5 308 1 232 277 0 15 chr20 44343935 44344000 -22324005 + MER5A DNA MER1_type 126 189 0 1078 195 37 19 chr20 44344042 44344257 -22323748 + MER20 DNA MER1_type 1 219 0 2151 98 51 0 chr20 44344489 44344785 -22323220 + AluSq SINE Alu 1 311 -2 387 362 66 25 chr20 44344785 44345103 -22322902 - L2 LINE L2 -346 2968 2638 270 217 0 0 chr20 44345104 44345164 -22322841 + G-rich Low_complexity Low_complexity 1 60 0 252 304 139 21 chr20 44345204 44345398 -22322607 - L2 LINE L2 -673 2641 2425 912 153 11 51 chr20 44345559 44345736 -22322269 - AluJo SINE Alu -17 295 126 354 272 28 134 chr20 44346678 44346808 -22321197 + L2 LINE L2 3104 3203 -110 879 216 22 0 chr20 44346808 44346993 -22321012 - MER53 DNA DNA 0 189 1 354 272 28 134 chr20 44346993 44347079 -22320926 + L2 LINE L2 3203 3297 -16 457 310 22 8 chr20 44347504 44347654 -22320351 - MIR SINE MIR -63 145 8 407 318 27 27 chr20 44348358 44348506 -22319499 - MIR3 SINE MIR -12 196 49 236 322 119 7 chr20 44349006 44349149 -22318856 + MIR SINE MIR 23 181 -81 347 262 222 18 chr20 44349149 44349424 -22318581 + L1MC4a LINE L1 5840 6170 -1638 25 31 0 0 chr20 44349438 44349470 -22318535 + AT_rich Low_complexity Low_complexity 1 32 0 313 286 186 0 chr20 44349675 44349815 -22318190 - MIR SINE MIR -33 229 64 261 173 264 73 chr20 44349861 44349971 -22318034 - MER5B DNA MER1_type 0 178 48 807 171 0 0 chr20 44349994 44350111 -22317894 - AluJo SINE Alu -194 118 2 238 233 75 22 chr20 44350122 44350267 -22317738 - MIR SINE MIR -44 218 59 702 280 32 5 chr20 44350267 44350453 -22317552 - MER91A DNA MER1_type 0 196 6 697 305 38 5 chr20 44350946 44351156 -22316849 + MIR SINE MIR 3 219 -43 410 253 30 0 chr20 44351186 44351285 -22316720 - MIR SINE MIR -58 204 103 21 36 0 0 chr20 44351339 44351367 -22316638 + AT_rich Low_complexity Low_complexity 1 28 0 664 115 0 0 chr20 44351367 44351454 -22316551 - AluJo SINE Alu -194 118 32 324 222 28 0 chr20 44351770 44351842 -22316163 + MIR3 SINE MIR 87 160 -48 181 200 50 17 chr20 44352626 44352686 -22315319 + MIR SINE MIR 64 125 -83 731 269 76 13 chr20 44353577 44353815 -22314190 + MIR SINE MIR 9 261 -1 353 272 80 25 chr20 44354210 44354372 -22313633 - MIR SINE MIR -71 191 21 189 274 188 8 chr20 44354404 44354521 -22313484 - MIR SINE MIR -48 214 77 1595 111 70 0 chr20 44354815 44355086 -22312919 - L1MA4 LINE L1 -3 6297 6008 1916 124 20 24 chr20 44355097 44355395 -22312610 - AluSx SINE Alu -15 297 1 256 200 271 0 chr20 44356277 44356362 -22311643 - MER104 DNA Tc2 0 180 73 317 363 48 0 chr20 44356759 44356883 -22311122 - MIR SINE MIR -58 150 21 490 220 0 19 chr20 44357077 44357236 -22310769 + (CTCA)n Simple_repeat Simple_repeat 1 156 0 267 292 11 0 chr20 44357249 44357338 -22310667 + (CTCA)n Simple_repeat Simple_repeat 2 91 0 711 275 11 11 chr20 44357571 44357749 -22310256 - MER45A DNA AcHobo 0 178 1 201 319 0 14 chr20 44357755 44357827 -22310178 + G-rich Low_complexity Low_complexity 5 75 0 477 281 96 6 chr20 44357836 44358003 -22310002 - MIR SINE MIR -34 228 47 182 215 0 15 chr20 44359701 44359766 -22308239 + (TG)n Simple_repeat Simple_repeat 1 64 0 212 278 56 0 chr20 44360370 44360442 -22307563 + MIR SINE MIR 66 141 -67 571 244 24 12 chr20 44360708 44360872 -22307133 + MIR SINE MIR 31 196 -66 307 253 47 73 chr20 44361157 44361307 -22306698 + MIR3 SINE MIR 26 171 -37 708 302 52 0 chr20 44361635 44361867 -22306138 - MIR SINE MIR -10 252 9 448 203 0 39 chr20 44361940 44362093 -22305912 + (TG)n Simple_repeat Simple_repeat 1 147 0 599 96 35 72 chr20 44362126 44362594 -22305411 + (TG)n Simple_repeat Simple_repeat 1 450 0 31 0 0 0 chr20 44362737 44362768 -22305237 + AT_rich Low_complexity Low_complexity 1 31 0 389 279 12 75 chr20 44362768 44362929 -22305076 - MIR3 SINE MIR -39 169 19 211 282 143 17 chr20 44363305 44363439 -22304566 - MIR3 SINE MIR -52 156 27 275 226 16 0 chr20 44363908 44363970 -22304035 - MIR SINE MIR -12 250 188 609 275 48 11 chr20 44364214 44364403 -22303602 - MIR SINE MIR -20 242 47 407 325 18 24 chr20 44364537 44364706 -22303299 + MIR3 SINE MIR 17 184 -24 315 0 0 0 chr20 44365226 44365261 -22302744 + (TG)n Simple_repeat Simple_repeat 2 36 0 362 319 43 9 chr20 44365671 44365787 -22302218 - MIR SINE MIR -48 160 41 2041 114 7 7 chr20 44365911 44366208 -22301797 + AluSx SINE Alu 1 297 -15 251 243 71 23 chr20 44367123 44367216 -22300789 + MIR3 SINE MIR 69 167 -41 2168 95 17 0 chr20 44367305 44367601 -22300404 - AluSq SINE Alu -12 301 1 339 286 136 27 chr20 44368127 44368274 -22299731 - MIR3 SINE MIR -6 202 40 1855 141 20 7 chr20 44369247 44369546 -22298459 + AluJo SINE Alu 1 303 -9 812 286 147 11 chr20 44369574 44370196 -22297809 - L2 LINE L2 -1 3312 2566 233 317 65 16 chr20 44370317 44370440 -22297565 - MIR3 SINE MIR -70 138 10 213 359 33 0 chr20 44370970 44371062 -22296943 - L3 LINE CR1 -176 1401 1307 343 196 68 0 chr20 44371596 44371686 -22296319 + MIR SINE MIR 61 146 -62 932 221 48 36 chr20 44372239 44372488 -22295517 - MIR SINE MIR -2 260 9 433 310 13 16 chr20 44372525 44372714 -22295291 + MIR SINE MIR 30 219 -43 227 360 30 0 chr20 44373094 44373194 -22294811 - MER103 DNA DNA -54 112 10 415 297 20 0 chr20 44373826 44373927 -22294078 - MIR SINE MIR -69 139 37 217 224 0 0 chr20 44374171 44374220 -22293785 + (TTCA)n Simple_repeat Simple_repeat 3 51 0 377 261 31 130 chr20 44374276 44374598 -22293407 + L2 LINE L2 3024 3313 0 277 278 56 40 chr20 44375031 44375157 -22292848 + MER5B DNA MER1_type 1 128 -50 2216 97 13 0 chr20 44375159 44375459 -22292546 + AluSx SINE Alu 1 304 -8 224 298 106 11 chr20 44375628 44375722 -22292283 - MIR SINE MIR -86 122 20 259 240 19 39 chr20 44375742 44375846 -22292159 - MIR SINE MIR -94 168 67 1999 131 7 0 chr20 44376253 44376544 -22291461 - AluSx SINE Alu -19 293 1 864 262 38 4 chr20 44376653 44376890 -22291115 - MIR SINE MIR -10 252 8 224 246 58 58 chr20 44376997 44377066 -22290939 + MIR SINE MIR 79 147 -115 2186 83 35 0 chr20 44377518 44377807 -22290198 + AluSx SINE Alu 1 299 -13 253 286 36 0 chr20 44377855 44377939 -22290066 + CT-rich Low_complexity Low_complexity 2 88 0 1251 191 3 110 chr20 44377968 44378313 -22289692 + AluSp SINE Alu 3 310 -3 314 286 100 12 chr20 44378342 44378583 -22289422 - HAL1 LINE L1 -77 2430 2169 223 286 0 14 chr20 44378856 44378926 -22289079 - MIR SINE MIR -11 251 183 2206 103 0 0 chr20 44378940 44379230 -22288775 + AluSq SINE Alu 1 290 -23 424 41 54 61 chr20 44379230 44379377 -22288628 + (TA)n Simple_repeat Simple_repeat 1 146 0 728 256 82 18 chr20 44379406 44379625 -22288380 - MIR SINE MIR -12 250 18 266 241 0 0 chr20 44379831 44379889 -22288116 + L2 LINE L2 3255 3312 -1 222 183 0 0 chr20 44380109 44380180 -22287825 + (TA)n Simple_repeat Simple_repeat 1 71 0 1758 135 4 0 chr20 44380181 44380447 -22287558 - AluSx SINE Alu -45 267 1 267 314 132 68 chr20 44380449 44380503 -22287502 - L2 LINE L2 -8 3264 3215 2053 103 4 0 chr20 44380503 44380808 -22287197 + AluSx SINE Alu 1 306 0 267 314 132 68 chr20 44380808 44381077 -22286928 - L2 LINE L2 -57 3215 2919 366 292 33 16 chr20 44381082 44381209 -22286796 + MIR3 SINE MIR 30 161 -47 426 273 0 18 chr20 44381789 44381899 -22286106 + MIR SINE MIR 49 156 -106 283 266 114 0 chr20 44381913 44381992 -22286013 - L2 LINE L2 -23 3249 3162 280 296 0 0 chr20 44381994 44382065 -22285940 + (TG)n Simple_repeat Simple_repeat 2 72 0 489 311 191 54 chr20 44382229 44382456 -22285549 - L2 LINE L2 -339 2975 2780 1865 141 3 7 chr20 44382456 44382747 -22285258 - AluSx SINE Alu -18 294 5 489 311 191 54 chr20 44382747 44383112 -22284893 - L2 LINE L2 -534 2780 2466 2037 146 0 16 chr20 44383112 44383428 -22284577 - AluJo SINE Alu -1 311 1 489 311 191 54 chr20 44383428 44383935 -22284070 - L2 LINE L2 -848 2466 1724 604 291 42 4 chr20 44383935 44383990 -22284015 - L2 LINE L2 -2268 1046 995 1945 133 3 13 chr20 44383990 44384291 -22283714 + AluSx SINE Alu 1 298 -14 604 291 42 4 chr20 44384291 44384472 -22283533 - L2 LINE L2 -2319 995 801 1145 185 58 5 chr20 44384474 44384679 -22283326 - MER20 DNA MER1_type -3 216 1 621 231 11 48 chr20 44384768 44384954 -22283051 + MIR SINE MIR 84 262 0 267 345 136 12 chr20 44385220 44385475 -22282530 - L2 LINE L2 -213 3059 2777 281 262 12 48 chr20 44386801 44386885 -22281120 - MIR3 SINE MIR -8 200 120 202 299 37 19 chr20 44388362 44388469 -22279536 - MIR SINE MIR -18 244 136 370 247 11 40 chr20 44388525 44388653 -22279352 - MIR SINE MIR -69 139 14 216 0 0 0 chr20 44389813 44389837 -22278168 + (T)n Simple_repeat Simple_repeat 1 24 0 270 245 171 28 chr20 44390449 44390605 -22277400 - MIR SINE MIR -56 206 32 221 28 83 0 chr20 44390822 44390858 -22277147 + T-rich Low_complexity Low_complexity 2 40 0 1862 170 0 0 chr20 44390867 44391179 -22276826 + AluJo SINE Alu 1 312 0 830 237 86 0 chr20 44391310 44391496 -22276509 - MER63A DNA MER1_type -6 204 3 321 217 174 0 chr20 44391642 44391734 -22276271 + MIR SINE MIR 83 190 -72 459 202 30 0 chr20 44392220 44392319 -22275686 - MIR SINE MIR -115 147 46 2328 103 0 0 chr20 44392360 44392670 -22275335 + AluSx SINE Alu 1 310 -2 543 184 0 0 chr20 44392679 44392766 -22275239 + LTR26B LTR ERV1 384 470 -61 1203 144 19 19 chr20 44392803 44393018 -22274987 - AluJo SINE Alu -12 300 86 430 224 121 55 chr20 44393370 44393481 -22274524 - MIR SINE MIR -11 251 124 1793 158 0 31 chr20 44393481 44393798 -22274207 + AluSx SINE Alu 1 307 -5 430 224 121 55 chr20 44393798 44393851 -22274154 - MIR SINE MIR -138 124 76 726 264 78 13 chr20 44394428 44394659 -22273346 + MER113 DNA MER1_type? 141 386 -135 2125 138 0 0 chr20 44394867 44395165 -22272840 - AluSx SINE Alu -14 298 1 356 306 82 49 chr20 44395193 44395376 -22272629 - L1MC4 LINE L1 -1322 6720 6532 334 360 85 27 chr20 44395378 44395861 -22272144 - L1M4 LINE L1 -3436 2710 2200 317 213 0 75 chr20 44395830 44395910 -22272095 + L1MCa LINE L1 1995 2068 -4358 * 332 264 23 23 chr20 44395871 44395958 -22272047 - L1MC4 LINE L1 -1339 6703 6617 * 360 315 0 0 chr20 44395927 44396016 -22271989 - L1MC4 LINE L1 -1339 6703 6615 1912 133 35 3 chr20 44396016 44396302 -22271703 - AluJo SINE Alu -17 295 1 433 257 92 0 chr20 44396303 44396455 -22271550 - L2 LINE L2 -596 2718 2553 267 31 0 0 chr20 44396472 44396504 -22271501 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 1258 236 183 27 chr20 44396546 44396800 -22271205 - L2 LINE L2 -477 2837 2624 2520 190 45 80 chr20 44396800 44397376 -22270629 + MLT1E3 LTR MaLR 1 553 -71 2313 113 3 0 chr20 44397376 44397677 -22270328 - AluSq SINE Alu -11 302 1 2520 190 45 80 chr20 44397677 44397747 -22270258 + MLT1E3 LTR MaLR 553 624 0 1258 236 183 27 chr20 44397747 44398039 -22269966 - L2 LINE L2 -690 2624 2206 1630 178 3 33 chr20 44398049 44398353 -22269652 + AluJo SINE Alu 1 295 -17 1459 201 32 30 chr20 44398355 44398414 -22269591 + L1ME1 LINE L1 5789 5846 -320 1986 132 24 7 chr20 44398414 44398709 -22269296 + AluSx SINE Alu 3 302 -10 1459 201 32 30 chr20 44398709 44399018 -22268987 + L1ME1 LINE L1 5846 6158 -8 2293 105 0 10 chr20 44399020 44399325 -22268680 + AluSx SINE Alu 1 302 -10 1813 136 3 71 chr20 44399497 44399820 -22268185 + AluJo SINE Alu 1 301 -11 1703 198 7 0 chr20 44400514 44400807 -22267198 - AluJo SINE Alu -17 295 1 2341 202 60 60 chr20 44400827 44401187 -22266818 + HsTC2a DNA Tc2 14 373 -1527 2596 74 0 0 chr20 44401187 44401497 -22266508 + AluY SINE Alu 1 310 -1 2341 202 60 60 chr20 44401497 44401686 -22266319 + HsTC2a DNA Tc2 373 561 -1339 2244 132 0 0 chr20 44401686 44401981 -22266024 - AluSx SINE Alu -16 296 2 2014 111 21 10 chr20 44401983 44402271 -22265734 - AluSg SINE Alu -19 291 1 2341 202 60 60 chr20 44402271 44402429 -22265576 + HsTC2a DNA Tc2 561 725 -19 243 77 26 26 chr20 44402438 44402477 -22265528 - MIR SINE MIR -113 149 111 2086 123 0 20 chr20 44402685 44402987 -22265018 + AluSx SINE Alu 7 302 -10 322 208 122 9 chr20 44403169 44403280 -22264725 - MIR SINE MIR -60 148 20 742 298 67 0 chr20 44403545 44403875 -22264130 + L2 LINE L2 2712 3058 -255 836 233 22 0 chr20 44403880 44404060 -22263945 - MER58A DNA MER1_type -38 186 3 246 261 54 33 chr20 44404067 44404159 -22263846 + L2 LINE L2 3150 3243 -70 2518 205 44 4 chr20 44404160 44404681 -22263324 + MLT1F LTR MaLR 1 542 0 217 197 33 49 chr20 44404684 44404745 -22263260 + L2 LINE L2 3254 3313 0 31 92 0 0 chr20 44404835 44404922 -22263083 + AT_rich Low_complexity Low_complexity 1 87 0 200 269 0 19 chr20 44404962 44405014 -22262991 + L3 LINE CR1 1523 1573 -4 583 287 63 83 chr20 44405134 44405837 -22262168 - L2 LINE L2 0 3272 2572 2116 131 0 7 chr20 44405955 44406260 -22261745 + AluSx SINE Alu 1 303 -9 203 368 26 13 chr20 44406361 44406437 -22261568 + MIR SINE MIR 108 184 -78 2155 116 0 0 chr20 44407088 44407400 -22260605 + AluSx SINE Alu 1 312 0 181 352 55 21 chr20 44407833 44407978 -22260027 + L2 LINE L2 2909 3058 -214 707 274 133 18 chr20 44408022 44408354 -22259651 + LTR33 LTR ERVL 31 400 -121 878 180 85 0 chr20 44408394 44408583 -22259422 + MER20 DNA MER1_type 1 205 -14 192 164 119 60 chr20 44408709 44408776 -22259229 - L2 LINE L2 -62 3210 3140 2063 98 0 51 chr20 44408917 44409212 -22258793 + AluSx SINE Alu 1 280 -32 329 277 80 0 chr20 44409413 44409525 -22258480 + MIR SINE MIR 128 248 -14 206 196 219 0 chr20 44409588 44409661 -22258344 + MIR SINE MIR 64 151 -62 550 202 26 26 chr20 44409822 44409936 -22258069 - MER81 DNA DNA 0 114 1 780 230 109 42 chr20 44409981 44409992 -22258013 - MIR SINE MIR -3 259 250 2066 124 0 0 chr20 44409992 44410300 -22257705 + AluSx SINE Alu 2 309 0 780 230 109 42 chr20 44410300 44410526 -22257479 - MIR SINE MIR -12 250 5 2090 138 0 13 chr20 44410538 44410842 -22257163 - AluSx SINE Alu -11 301 2 210 118 0 0 chr20 44410873 44410907 -22257098 + (TAA)n Simple_repeat Simple_repeat 1 34 0 342 246 159 59 chr20 44411101 44411360 -22256645 - MER102a DNA MER1_type -10 320 29 2627 18 0 0 chr20 44411463 44411775 -22256230 + AluYa5 SINE Alu 1 312 0 1336 205 75 40 chr20 44411784 44412134 -22255871 + L1ME3A LINE L1 5773 6138 -32 1626 148 28 60 chr20 44412134 44412451 -22255554 - AluJb SINE Alu -5 307 1 1336 205 75 40 chr20 44412451 44412471 -22255534 + L1ME3A LINE L1 6138 6156 -14 346 127 0 0 chr20 44412662 44412725 -22255280 + Alu SINE Alu 239 301 -1 2223 122 3 3 chr20 44412859 44413171 -22254834 - AluSx SINE Alu 0 312 1 282 197 333 17 chr20 44413172 44413289 -22254716 + L2 LINE L2 3159 3312 -1 347 252 99 0 chr20 44413423 44413534 -22254471 - MIR SINE MIR -112 150 29 403 241 0 62 chr20 44413574 44413608 -22254397 - MIR SINE MIR -95 167 132 1743 159 10 36 chr20 44413608 44413916 -22254089 + AluJo SINE Alu 1 300 -12 2288 88 3 0 chr20 44413926 44414238 -22253767 + AluSp SINE Alu 1 313 0 403 241 0 62 chr20 44414238 44414303 -22253702 - MIR SINE MIR -139 123 63 2372 106 0 0 chr20 44414882 44415184 -22252821 + AluSx SINE Alu 1 302 -10 191 292 21 0 chr20 44415314 44415362 -22252643 - L2 LINE L2 -1 3312 3264 541 291 82 41 chr20 44415726 44415970 -22252035 + MIR SINE MIR 3 256 -6 295 205 72 0 chr20 44416037 44416120 -22251885 + L1MC4 LINE L1 6615 6703 -1339 216 216 0 0 chr20 44416120 44416171 -22251834 + (CATATA)n Simple_repeat Simple_repeat 6 56 0 1636 160 87 4 chr20 44416239 44416514 -22251491 + AluJb SINE Alu 1 298 -14 290 255 157 10 chr20 44416514 44416616 -22251389 + L2 LINE L2 3197 3313 0 285 311 0 29 chr20 44416647 44416750 -22251255 + MIR SINE MIR 63 162 -100 * 729 234 80 29 chr20 44416741 44416980 -22251025 - MIR SINE MIR -10 252 2 870 231 98 53 chr20 44417002 44417083 -22250922 + L1ME3 LINE L1 5746 5822 -340 852 172 0 8 chr20 44417083 44417217 -22250788 + FLAM_C SINE Alu 1 133 0 870 231 98 53 chr20 44417217 44417256 -22250749 + L1ME3 LINE L1 5822 5858 -304 2275 99 0 48 chr20 44417256 44417569 -22250436 + AluSg SINE Alu 2 299 -11 870 231 98 53 chr20 44417569 44417846 -22250159 + L1ME3 LINE L1 5858 6162 0 1577 158 119 4 chr20 44417854 44418114 -22249891 + AluJb SINE Alu 1 290 -12 358 276 33 30 chr20 44418118 44418265 -22249740 - L1MC4 LINE L1 -1339 6703 6576 1106 138 60 0 chr20 44418609 44418776 -22249229 + 7SLRNA srpRNA srpRNA 137 313 -7 279 233 0 14 chr20 44419092 44419165 -22248840 - L1ME4a LINE L1 -214 5907 5836 785 272 49 29 chr20 44419239 44419482 -22248523 - MIR SINE MIR 0 262 15 2066 125 48 0 chr20 44419778 44420067 -22247938 + AluSx SINE Alu 2 304 -8 738 204 124 163 chr20 44420072 44420359 -22247646 - L1ME1 LINE L1 -6 6160 5863 1716 123 90 7 chr20 44420359 44420636 -22247369 - AluSx SINE Alu -11 301 2 738 204 124 163 chr20 44420636 44420696 -22247309 - L1ME1 LINE L1 -303 5863 5802 394 57 0 0 chr20 44420696 44420749 -22247256 + MADE1 DNA Mariner 28 80 0 738 204 124 163 chr20 44420749 44420766 -22247239 - L1ME1 LINE L1 -364 5802 5786 1671 141 80 14 chr20 44420766 44421042 -22246963 + AluJb SINE Alu 7 300 -12 738 204 124 163 chr20 44421042 44421242 -22246763 - L1ME1 LINE L1 -380 5786 5566 412 243 18 95 chr20 44421310 44421363 -22246642 + MIR SINE MIR 99 154 -108 2422 83 0 0 chr20 44421363 44421652 -22246353 + AluSc SINE Alu 1 289 -20 412 243 18 95 chr20 44421652 44421767 -22246238 + MIR SINE MIR 154 254 -8 2055 99 78 0 chr20 44421768 44422051 -22245954 - AluSx SINE Alu -7 305 1 549 250 106 28 chr20 44422205 44422385 -22245620 - MIR SINE MIR -32 230 37 445 219 100 60 chr20 44422480 44422807 -22245198 - LTR16A1 LTR ERVL -13 444 34 501 318 50 21 chr20 44424492 44424729 -22243276 + MIR SINE MIR 11 254 -8 473 279 93 22 chr20 44425379 44425562 -22242443 + MIR SINE MIR 67 262 0 636 226 157 60 chr20 44425606 44425671 -22242334 + MIR SINE MIR 5 62 -200 2072 123 0 11 chr20 44425671 44425982 -22242023 + AluSx SINE Alu 1 308 0 636 226 157 60 chr20 44425982 44426150 -22241855 + MIR SINE MIR 62 262 0 222 244 0 0 chr20 44426343 44426388 -22241617 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 285 234 29 91 chr20 44426415 44426480 -22241525 - L1ME2 LINE L1 0 6170 6103 1805 164 0 33 chr20 44426480 44426784 -22241221 + AluJb SINE Alu 1 294 -18 285 234 29 91 chr20 44426784 44426947 -22241058 - L1ME2 LINE L1 -67 6103 5961 2011 118 29 13 chr20 44427022 44427328 -22240677 - AluSx SINE Alu -1 311 1 796 248 72 52 chr20 44427328 44427707 -22240298 - L1MC5 LINE L1 -936 6872 6564 368 231 77 10 chr20 44428260 44428364 -22239641 - MIR SINE MIR -64 144 34 2189 127 0 0 chr20 44428471 44428770 -22239235 - AluSx SINE Alu -13 299 1 324 299 65 9 chr20 44428869 44428976 -22239029 - MIR SINE MIR -121 141 29 831 251 9 32 chr20 44428993 44429212 -22238793 + MER20 DNA MER1_type 1 214 -5 2222 126 3 0 chr20 44429254 44429564 -22238441 + AluSx SINE Alu 1 311 -1 2203 111 3 7 chr20 44429869 44430167 -22237838 - AluSx SINE Alu -15 297 1 294 363 26 0 chr20 44430311 44430424 -22237581 + MIR3 SINE MIR 55 170 -38 340 274 106 48 chr20 44430439 44430523 -22237482 + MIR SINE MIR 28 106 -156 2124 117 3 0 chr20 44430523 44430838 -22237167 - AluSx SINE Alu 0 316 1 340 274 106 48 chr20 44430838 44430960 -22237045 + MIR SINE MIR 106 247 -15 1260 106 82 0 chr20 44431329 44431499 -22236506 - AluSx SINE Alu -128 184 1 2048 96 0 93 chr20 44431510 44431832 -22236173 - AluSx SINE Alu -20 292 1 1730 180 122 10 chr20 44431832 44432227 -22235778 + MLT1D LTR MaLR 67 505 0 458 176 19 162 chr20 44432228 44432438 -22235567 + MER53 DNA DNA 9 188 -1 250 284 54 0 chr20 44432835 44432909 -22235096 - MIR SINE MIR -64 144 67 206 153 14 0 chr20 44433148 44433189 -22234816 + MIR SINE MIR 104 144 -118 196 269 65 43 chr20 44433878 44433971 -22234034 + MIR SINE MIR 16 110 -152 325 240 27 0 chr20 44434004 44434079 -22233926 - L2 LINE L2 -50 3263 3187 372 268 71 9 chr20 44434091 44434203 -22233802 + MIR SINE MIR 126 244 -18 506 201 45 52 chr20 44434209 44434343 -22233662 + L2 LINE L2 3178 3310 -3 212 244 126 34 chr20 44434438 44434557 -22233448 - L2 LINE L2 -206 3066 2937 503 264 258 0 chr20 44434787 44434969 -22233036 - L2 LINE L2 -6 3266 3038 * 615 180 74 0 chr20 44434966 44435088 -22232917 + L2 LINE L2 2579 2709 -605 2142 124 0 0 chr20 44435090 44435423 -22232582 - AluSx SINE Alu 0 333 1 1228 108 17 34 chr20 44435427 44435603 -22232402 + AluJo SINE Alu 120 292 -20 712 264 185 42 chr20 44435604 44436009 -22231996 - LTR16B LTR ERVL 0 464 2 802 228 233 32 chr20 44436194 44436251 -22231754 - L1MC4a LINE L1 -1904 5904 5860 2385 85 7 0 chr20 44436251 44436557 -22231448 - AluY SINE Alu -3 308 1 802 228 233 32 chr20 44436557 44436868 -22231137 - L1MC4a LINE L1 -1948 5860 5430 1787 97 120 0 chr20 44436868 44437126 -22230879 - AluSx SINE Alu -1 311 23 802 228 233 32 chr20 44437126 44437199 -22230806 - L1MC4a LINE L1 -2378 5430 5373 921 152 0 0 chr20 44438732 44438864 -22229141 + FLAM_C SINE Alu 2 133 -10 2175 95 0 83 chr20 44439734 44440060 -22227945 + AluSg SINE Alu 1 299 -11 2309 110 0 0 chr20 44440335 44440626 -22227379 - AluSx SINE Alu -21 291 1 808 292 155 18 chr20 44440640 44441136 -22226869 - MLT1K LTR MaLR -22 566 3 513 169 102 114 chr20 44441139 44441270 -22226735 - MIR SINE MIR -98 164 34 1855 150 27 10 chr20 44441270 44441563 -22226442 - AluJb SINE Alu -14 298 1 513 169 102 114 chr20 44441563 44441597 -22226408 - MIR SINE MIR -228 34 1 2346 106 3 0 chr20 44442300 44442603 -22225402 + AluSq SINE Alu 1 304 -9 216 312 24 80 chr20 44442792 44442917 -22225088 - MIR SINE MIR -51 211 94 365 284 14 34 chr20 44443250 44443398 -22224607 - MER103 DNA DNA -10 156 12 2206 119 3 3 chr20 44443555 44443850 -22224155 - AluSx SINE Alu -17 295 1 878 184 4 133 chr20 44444410 44444471 -22223534 + AluJo SINE Alu 95 162 -150 2281 86 14 3 chr20 44444471 44444761 -22223244 + AluSx SINE Alu 5 297 -15 878 184 4 133 chr20 44444761 44444932 -22223073 + AluJo SINE Alu 162 291 -21 2400 98 0 0 chr20 44445232 44445537 -22222468 - AluSx SINE Alu -7 305 1 314 315 110 24 chr20 44445590 44445717 -22222288 - MER5B DNA MER1_type -39 139 2 945 254 197 19 chr20 44445871 44446622 -22221383 - L2 LINE L2 -1 3312 2409 211 125 0 25 chr20 44446628 44446668 -22221337 - L2 LINE L2 -1 3312 3274 194 293 49 12 chr20 44447839 44447921 -22220084 + MIR3 SINE MIR 115 199 -9 2412 89 0 0 chr20 44448265 44448569 -22219436 + AluSg SINE Alu 1 304 -6 2202 106 7 3 chr20 44450470 44450763 -22217242 + AluSq SINE Alu 1 294 -19 2045 131 0 14 chr20 44451221 44451518 -22216487 + AluSx SINE Alu 1 293 -19 246 269 0 15 chr20 44452488 44452555 -22215450 - MIR SINE MIR -159 103 38 262 276 104 37 chr20 44453554 44453688 -22214317 + MIR SINE MIR 28 170 -92 2273 114 0 0 chr20 44453981 44454279 -22213726 + AluSx SINE Alu 1 298 -14 320 42 146 0 chr20 44454279 44454327 -22213678 + HY3 scRNA scRNA 44 98 -3 294 224 75 0 chr20 44455530 44455597 -22212408 - MIR SINE MIR -178 84 13 2425 67 0 22 chr20 44455762 44456076 -22211929 + AluY SINE Alu 1 307 -4 412 308 111 57 chr20 44456353 44456687 -22211318 + L2 LINE L2 2916 3267 -5 225 281 30 104 chr20 44458992 44459223 -22208782 + L2 LINE L2 2897 3110 -162 186 182 45 0 chr20 44459291 44459335 -22208670 + L2 LINE L2 3227 3272 0 3213 164 49 86 chr20 44459355 44459774 -22208231 + L1M4 LINE L1 3878 4311 -1835 1699 182 13 10 chr20 44459774 44460082 -22207923 + AluJo SINE Alu 1 309 -3 1469 189 59 0 chr20 44460091 44460361 -22207644 - AluJo SINE Alu -21 291 6 3213 164 49 86 chr20 44460361 44460835 -22207170 + L1M4 LINE L1 4319 4747 -1399 2184 121 0 0 chr20 44460835 44461124 -22206881 + AluSx SINE Alu 1 289 -23 219 307 80 11 chr20 44462644 44462732 -22205273 + MIR SINE MIR 55 148 -60 2216 89 20 3 chr20 44462792 44463085 -22204920 - AluSq SINE Alu -10 303 6 2061 100 4 11 chr20 44463090 44463370 -22204635 - AluSq SINE Alu -35 278 1 1897 117 73 0 chr20 44463496 44463770 -22204235 + AluSq SINE Alu 9 302 -11 2312 90 20 0 chr20 44463781 44464080 -22203925 + AluSg1 SINE Alu 1 305 -4 1821 173 7 0 chr20 44465058 44465353 -22202652 + AluJb SINE Alu 1 297 -15 1692 130 46 87 chr20 44465671 44465994 -22202011 + AluJb SINE Alu 1 310 -2 314 208 26 13 chr20 44466004 44466081 -22201924 + L1ME LINE L1 5729 5806 -315 540 192 48 10 chr20 44466459 44466563 -22201442 + L1ME LINE L1 5572 5679 -442 1410 184 11 40 chr20 44466980 44467258 -22200747 - AluJo SINE Alu -1 311 42 2111 104 7 0 chr20 44468001 44468281 -22199724 + AluSg1 SINE Alu 1 282 -27 2195 113 0 0 chr20 44468379 44468683 -22199322 - AluSx SINE Alu 0 304 1 435 293 20 13 chr20 44469302 44469452 -22198553 + MIR SINE MIR 4 154 -108 2353 102 0 0 chr20 44469500 44469813 -22198192 + AluSq SINE Alu 1 313 0 2152 114 0 7 chr20 44470673 44470962 -22197043 + AluSg SINE Alu 1 287 -23 259 276 270 15 chr20 44471640 44471836 -22196169 + MIR SINE MIR 13 258 -4 2563 64 0 6 chr20 44471948 44472259 -22195746 + AluY SINE Alu 2 310 -1 2059 159 110 67 chr20 44472330 44472541 -22195464 + L1MB5 LINE L1 5585 5785 -389 2146 121 0 0 chr20 44472541 44472822 -22195183 + AluSx SINE Alu 1 281 -31 2059 159 110 67 chr20 44472822 44473120 -22194885 + L1MB5 LINE L1 5785 6122 -52 1870 151 10 16 chr20 44473120 44473424 -22194581 - AluSx SINE Alu -10 302 1 2059 159 110 67 chr20 44473424 44473468 -22194537 + L1MB5 LINE L1 6122 6163 -11 2302 93 0 0 chr20 44473491 44473780 -22194225 + AluSg SINE Alu 1 289 -21 2030 116 32 29 chr20 44473850 44474161 -22193844 - AluSx SINE Alu 0 312 1 897 163 62 19 chr20 44474161 44474321 -22193684 - FRAM SINE Alu -12 164 1 318 209 40 74 chr20 44474568 44474716 -22193289 + MIR SINE MIR 120 262 0 2280 165 58 19 chr20 44474805 44475236 -22192769 + MLT1C LTR MaLR 18 465 -2 861 214 33 45 chr20 44475352 44475595 -22192410 + L2 LINE L2 2375 2614 -700 1002 102 15 0 chr20 44475649 44475786 -22192219 + AluSq/x SINE Alu 1 139 -173 204 40 0 0 chr20 44475788 44475813 -22192192 + (A)n Simple_repeat Simple_repeat 1 25 0 2364 98 3 7 chr20 44476152 44476458 -22191547 + AluSp SINE Alu 1 305 -8 267 200 62 38 chr20 44476540 44476620 -22191385 + MER34 LTR ERV1 461 542 0 397 269 15 22 chr20 44476620 44476754 -22191251 + L2 LINE L2 2641 2773 -541 577 44 66 55 chr20 44476754 44476845 -22191160 + AluY SINE Alu 1 92 -219 949 144 62 25 chr20 44477118 44477278 -22190727 + FRAM SINE Alu 1 165 -11 1381 216 117 7 chr20 44477308 44477627 -22190378 + MER21B LTR ERV1 1 445 -486 1067 110 86 6 chr20 44477634 44477797 -22190208 + AluSg/x SINE Alu 72 247 -65 1509 228 58 58 chr20 44477797 44477886 -22190119 + MER21B LTR ERV1 376 464 -399 1997 155 6 9 chr20 44477886 44478234 -22189771 + L1PA16 LINE L1 5806 6152 -14 1509 228 58 58 chr20 44478234 44478557 -22189448 + MER21B LTR ERV1 463 788 -75 185 337 32 21 chr20 44479878 44479973 -22188032 - L2 LINE L2 -189 3083 2988 597 268 147 48 chr20 44479990 44480427 -22187578 - MER113 DNA MER1_type? -4 517 38 384 233 90 15 chr20 44480451 44480584 -22187421 - LTR48 LTR ERV1 -481 306 164 1275 262 101 44 chr20 44480949 44481245 -22186760 - MER90 LTR ERV1 -23 591 256 4209 85 22 4 chr20 44481245 44481797 -22186208 + LTR6A LTR ERV1 1 562 -2 1275 262 101 44 chr20 44481797 44481977 -22186028 - MER90 LTR ERV1 -358 256 88 257 260 299 0 chr20 44482106 44482233 -22185772 - L3 LINE CR1 -31 1546 1382 2670 82 99 5 chr20 44482235 44482640 -22185365 + LTR7 LTR ERV1 1 443 -7 2062 74 0 16 chr20 44482829 44483087 -22184918 - AluSx SINE Alu -8 304 51 726 307 93 24 chr20 44483107 44483341 -22184664 - L2 LINE L2 0 3313 3042 2185 138 0 0 chr20 44483341 44483653 -22184352 - AluSx SINE Alu 0 312 1 726 307 93 24 chr20 44483653 44483793 -22184212 - L2 LINE L2 -271 3042 2913 2217 81 115 29 chr20 44483793 44484034 -22183971 + MER51B LTR ERV1 1 282 -95 2242 89 0 0 chr20 44484034 44484315 -22183690 - AluSg SINE Alu -29 281 1 2217 81 115 29 chr20 44484315 44484420 -22183585 + MER51B LTR ERV1 282 377 0 382 364 0 6 chr20 44484423 44484585 -22183420 - L2 LINE L2 -452 2862 2702 2338 90 3 0 chr20 44484644 44484943 -22183062 - AluSc SINE Alu -9 300 1 251 118 17 193 chr20 44484947 44485066 -22182939 - L2 LINE L2 -604 2710 2613 4817 85 27 33 chr20 44485074 44485598 -22182407 + LTR8 LTR ERV1 1 523 -168 1803 124 21 21 chr20 44485598 44485904 -22182101 + AluSx SINE Alu 1 306 0 4817 85 27 33 chr20 44485904 44486073 -22181932 + LTR8 LTR ERV1 523 691 0 229 254 0 0 chr20 44486154 44486209 -22181796 - L1MC/D LINE L1 -2009 5799 5745 2194 102 0 3 chr20 44486209 44486503 -22181502 - AluSc SINE Alu -16 293 1 1703 154 0 15 chr20 44486503 44486774 -22181231 - AluJb SINE Alu -14 298 31 1810 194 64 113 chr20 44486774 44487016 -22180989 - LTR8 LTR ERV1 -4 687 434 2529 68 0 3 chr20 44487016 44487325 -22180680 + AluY SINE Alu 2 309 -2 1810 194 64 113 chr20 44487325 44487508 -22180497 - LTR8 LTR ERV1 -257 434 243 2211 123 3 0 chr20 44487508 44487809 -22180196 + AluSx SINE Alu 1 302 -10 1810 194 64 113 chr20 44487809 44487990 -22180015 - LTR8 LTR ERV1 -448 243 119 2087 90 87 3 chr20 44487990 44488279 -22179726 + AluSp SINE Alu 1 313 0 1810 194 64 113 chr20 44488279 44488393 -22179612 - LTR8 LTR ERV1 -572 119 1 2187 119 3 0 chr20 44488721 44489032 -22178973 + AluSx SINE Alu 1 312 0 318 252 16 57 chr20 44489753 44489876 -22178129 + MIR SINE MIR 72 189 -73 228 315 48 40 chr20 44490288 44490561 -22177444 - L2 LINE L2 -352 2962 2688 800 169 0 0 chr20 44490674 44490798 -22177207 - FLAM_A SINE Alu -9 124 1 351 208 175 25 chr20 44490800 44490920 -22177085 - L2 LINE L2 -8 3305 3168 301 274 131 91 chr20 44491232 44491758 -22176247 - L2 LINE L2 -1241 2073 1527 347 269 166 58 chr20 44491888 44491939 -22176066 - MIR SINE MIR -4 258 214 2152 134 0 0 chr20 44491939 44492238 -22175767 - AluSx SINE Alu -13 299 1 347 269 166 58 chr20 44492238 44492409 -22175596 - MIR SINE MIR -48 214 12 2186 127 0 0 chr20 44492828 44493119 -22174886 + AluSq SINE Alu 1 291 -22 2450 135 22 33 chr20 44493290 44493750 -22174255 - L1MB2 LINE L1 -30 6141 5687 241 211 133 11 chr20 44493769 44493859 -22174146 + L1ME4a LINE L1 6021 6121 0 2267 95 6 22 chr20 44494382 44494566 -22173439 - AluSx SINE Alu 0 312 134 2259 108 7 0 chr20 44494566 44494871 -22173134 - AluSp SINE Alu -5 308 2 2267 95 6 22 chr20 44494871 44495003 -22173002 - AluSx SINE Alu -178 134 1 2115 118 3 30 chr20 44495051 44495355 -22172650 - AluSx SINE Alu -16 296 1 26 0 0 0 chr20 44495455 44495481 -22172524 + AT_rich Low_complexity Low_complexity 1 26 0 373 288 83 8 chr20 44495752 44495884 -22172121 - MIR SINE MIR -74 188 47 858 215 34 133 chr20 44495910 44496268 -22171737 - L1MC5 LINE L1 -37 7924 7532 648 260 0 0 chr20 44496268 44496391 -22171614 - FLAM_A SINE Alu -10 123 1 2067 121 0 35 chr20 44496391 44496705 -22171300 - AluSx SINE Alu -9 303 1 858 215 34 133 chr20 44496705 44496801 -22171204 - L1MC5 LINE L1 -428 7533 7536 926 70 330 87 chr20 44496801 44496881 -22171124 - MER30 DNA MER1_type 0 230 171 2390 88 7 0 chr20 44496881 44497188 -22170817 - AluSq SINE Alu -4 309 1 926 70 330 87 chr20 44497188 44497292 -22170713 - MER30 DNA MER1_type -59 171 1 858 215 34 133 chr20 44497292 44497420 -22170585 - L1MC5 LINE L1 -424 7537 7398 2209 114 0 10 chr20 44497422 44497730 -22170275 - AluSx SINE Alu -7 305 1 2103 124 3 34 chr20 44498028 44498351 -22169654 - AluSq SINE Alu 0 313 1 1220 193 0 5 chr20 44498752 44498975 -22169030 - AluJo SINE Alu -7 305 84 2191 108 17 0 chr20 44499162 44499458 -22168547 - AluSq SINE Alu -12 301 1 248 163 184 0 chr20 44499687 44499736 -22168269 + MIR SINE MIR 86 143 -65 2169 100 0 44 chr20 44500041 44500361 -22167644 - AluSx SINE Alu -5 307 2 461 253 139 42 chr20 44500502 44500739 -22167266 + MIR SINE MIR 2 261 -1 490 283 115 31 chr20 44501096 44501239 -22166766 - MLT1L LTR MaLR -159 456 326 2332 80 0 38 chr20 44501239 44501552 -22166453 + AluSq SINE Alu 1 301 -12 490 283 115 31 chr20 44501552 44501694 -22166311 - MLT1L LTR MaLR -289 326 147 633 279 70 43 chr20 44501848 44502149 -22165856 - MLT1J LTR MaLR -47 464 156 2292 124 0 0 chr20 44502350 44502702 -22165303 - AluSx SINE Alu 0 355 4 1674 158 29 15 chr20 44503020 44503293 -22164712 + AluJo SINE Alu 11 287 -25 1822 157 3 10 chr20 44503437 44503730 -22164275 + AluJb SINE Alu 3 293 -19 2052 143 0 16 chr20 44504010 44504324 -22163681 - AluSx SINE Alu -3 309 1 200 335 159 0 chr20 44504432 44504602 -22163403 + L2 LINE L2 3117 3313 0 413 164 10 58 chr20 44504746 44504850 -22163155 - L1MC5 LINE L1 -52 7909 7811 323 250 12 12 chr20 44504969 44505053 -22162952 + MIR SINE MIR 157 240 -22 358 250 65 11 chr20 44505117 44505209 -22162796 + MIR SINE MIR 64 160 -102 713 155 0 0 chr20 44505223 44505326 -22162679 + AluSq/x SINE Alu 2 104 -208 2112 118 7 16 chr20 44505364 44505669 -22162336 + AluSx SINE Alu 1 302 -10 450 0 0 0 chr20 44506324 44506374 -22161631 + (CA)n Simple_repeat Simple_repeat 1 50 0 1778 173 3 3 chr20 44507012 44507307 -22160698 + AluJb SINE Alu 1 295 -17 287 313 10 0 chr20 44507579 44507675 -22160330 - MIR SINE MIR -10 252 156 2961 73 9 52 chr20 44507677 44508117 -22159888 - HSMAR2 DNA Mariner -2 1300 880 667 188 0 30 chr20 44508142 44508275 -22159730 - MIR SINE MIR -64 198 70 404 241 118 48 chr20 44508329 44508516 -22159489 - L1MC4 LINE L1 0 8042 7843 732 273 77 60 chr20 44508516 44508532 -22159473 - MER20B DNA MER1_type -411 372 358 2284 62 31 3 chr20 44508532 44508823 -22159182 - AluY SINE Alu -12 299 1 732 273 77 60 chr20 44508823 44509172 -22158833 - MER20B DNA MER1_type -425 358 1 507 256 115 26 chr20 44510055 44510246 -22157759 + MIR SINE MIR 54 261 -1 438 320 102 73 chr20 44511068 44511521 -22156484 - L2 LINE L2 -3 3269 2804 1986 128 3 36 chr20 44511546 44511851 -22156154 - AluSx SINE Alu -17 295 1 232 132 408 13 chr20 44511858 44511934 -22156071 - L1ME2 LINE L1 0 6164 6059 221 246 18 0 chr20 44512552 44512609 -22155396 + (TTG)n Simple_repeat Simple_repeat 2 59 0 2115 101 0 14 chr20 44513292 44513608 -22154397 - AluSc SINE Alu 0 312 1 2379 95 0 0 chr20 44513826 44514132 -22153873 - AluSx SINE Alu -6 306 1 1836 121 20 10 chr20 44514711 44515008 -22152997 + AluSx SINE Alu 1 300 -12 2242 109 0 13 chr20 44515008 44515320 -22152685 + AluY SINE Alu 1 308 -3 205 171 0 0 chr20 44515675 44515710 -22152295 + (TAG)n Simple_repeat Simple_repeat 3 37 0 369 281 11 0 chr20 44515736 44515825 -22152180 - MIR SINE MIR -56 206 117 925 95 30 12 chr20 44516025 44516194 -22151811 + CT-rich Low_complexity Low_complexity 1 172 0 1057 171 17 0 chr20 44516213 44516389 -22151616 - AluJb SINE Alu -1 311 133 25 51 0 0 chr20 44516570 44516609 -22151396 + AT_rich Low_complexity Low_complexity 1 39 0 537 245 51 60 chr20 44517172 44517388 -22150617 - L1MC/D LINE L1 -2006 5802 5589 1212 156 6 144 chr20 44517393 44517753 -22150252 + AluJb SINE Alu 2 316 0 670 292 58 62 chr20 44518229 44518525 -22149480 + L1MEd LINE L1 569 864 -5255 2254 99 0 3 chr20 44518525 44518817 -22149188 + AluSg SINE Alu 1 291 -19 670 292 58 62 chr20 44518817 44519088 -22148917 + L1MEd LINE L1 864 1134 -4985 645 223 33 0 chr20 44519103 44519224 -22148781 - FAM SINE Alu -37 148 24 351 268 24 39 chr20 44519228 44519355 -22148650 + L1MEd LINE L1 1108 1232 -4887 390 251 17 91 chr20 44519435 44519477 -22148528 + L1MEd LINE L1 3064 3108 -3021 652 179 60 67 chr20 44519477 44519611 -22148394 + FLAM_A SINE Alu 1 133 0 390 251 17 91 chr20 44519611 44519812 -22148193 + L1MEd LINE L1 3108 3276 -2853 1802 132 34 20 chr20 44519812 44520107 -22147898 + AluJb SINE Alu 14 312 0 390 251 17 91 chr20 44520107 44520212 -22147793 + L1MEd LINE L1 3276 3387 -2742 2023 119 32 0 chr20 44520248 44520533 -22147472 + AluSx SINE Alu 3 296 -16 646 230 51 28 chr20 44520784 44520962 -22147043 - MLT1G LTR MaLR 0 590 409 2026 155 0 3 chr20 44520996 44521300 -22146705 - AluJo SINE Alu -9 303 1 589 172 35 17 chr20 44522039 44522155 -22145850 - FLAM_A SINE Alu -6 136 19 294 265 15 0 chr20 44522659 44522727 -22145278 - L2 LINE L2 -18 3254 3186 307 282 79 65 chr20 44522818 44523034 -22144971 - LTR67 LTR ERVL 0 557 339 2227 104 3 0 chr20 44523234 44523531 -22144474 - AluSx SINE Alu -14 298 1 1153 186 44 15 chr20 44523600 44523804 -22144201 + MER58A DNA MER1_type 1 210 -14 256 235 202 75 chr20 44523881 44524033 -22143972 + MER112 DNA MER1_type 1 189 -71 2123 141 7 0 chr20 44524033 44524337 -22143668 + AluSx SINE Alu 1 306 -6 256 235 202 75 chr20 44524337 44524397 -22143608 + MER112 DNA MER1_type 189 240 -20 389 269 8 25 chr20 44524493 44524612 -22143393 - LTR67 LTR ERVL -3 554 438 221 214 14 43 chr20 44524921 44524991 -22143014 + CT-rich Low_complexity Low_complexity 5 72 0 1740 143 22 4 chr20 44525353 44525626 -22142379 + AluJb SINE Alu 21 298 -14 1008 245 115 67 chr20 44525728 44525942 -22142063 - L1ME4a LINE L1 -2 6119 5917 1895 123 58 0 chr20 44525942 44526218 -22141787 - AluSg SINE Alu -18 292 1 1008 245 115 67 chr20 44526218 44526486 -22141519 - L1ME4a LINE L1 -204 5917 5604 476 179 0 0 chr20 44526486 44526570 -22141435 - L1MC2 LINE L1 -9 6335 6252 1008 245 115 67 chr20 44526570 44526642 -22141363 - L1ME4a LINE L1 -517 5604 5537 1136 107 0 0 chr20 44527063 44527222 -22140783 - AluSp/q SINE Alu 0 313 155 1637 185 3 11 chr20 44527316 44527603 -22140402 + AluJo SINE Alu 1 285 -27 382 268 159 19 chr20 44527921 44528078 -22139927 + MIR SINE MIR 14 192 -70 409 319 78 52 chr20 44528084 44528354 -22139651 - L2 LINE L2 -32 3281 3005 2043 99 15 0 chr20 44528421 44528693 -22139312 + AluSx SINE Alu 1 276 -36 246 62 0 0 chr20 44528694 44528726 -22139279 + (TAA)n Simple_repeat Simple_repeat 2 33 0 2248 103 0 7 chr20 44529473 44529775 -22138230 - AluSx SINE Alu -12 300 1 23 68 0 0 chr20 44529832 44529876 -22138129 + AT_rich Low_complexity Low_complexity 1 44 0 288 296 10 31 chr20 44530913 44531011 -22136994 + MIR SINE MIR 90 185 -77 494 265 115 30 chr20 44531080 44531280 -22136725 + MIR SINE MIR 46 262 0 228 222 234 47 chr20 44531421 44531592 -22136413 - HAL1 LINE L1 -10 2497 2295 502 242 5 109 chr20 44531595 44531806 -22136199 - HAL1 LINE L1 0 2507 2319 847 169 128 99 chr20 44531813 44532038 -22135967 - L1MC5 LINE L1 -27 7934 7692 2029 126 33 0 chr20 44532038 44532339 -22135666 - AluSx SINE Alu -1 311 1 847 169 128 99 chr20 44532339 44532497 -22135508 - L1MC5 LINE L1 -269 7692 7540 1186 104 12 6 chr20 44532525 44532689 -22135316 - AluSg/x SINE Alu -14 296 132 1558 127 9 0 chr20 44532689 44532917 -22135088 - AluSg/x SINE Alu -11 299 70 378 0 0 0 chr20 44533628 44533670 -22134335 + (TG)n Simple_repeat Simple_repeat 2 43 0 631 288 84 76 chr20 44533675 44534019 -22133986 - L2 LINE L2 -15 3257 2911 227 268 152 18 chr20 44534075 44534187 -22133818 + MIR3 SINE MIR 81 207 -1 2008 104 0 76 chr20 44534587 44534903 -22133102 - AluSx SINE Alu -20 292 1 259 255 61 0 chr20 44534960 44535058 -22132947 + L1ME4a LINE L1 6017 6120 -1 850 188 0 0 chr20 44535352 44535506 -22132499 + MSTB LTR MaLR 31 184 -242 22 0 0 0 chr20 44535506 44535528 -22132477 + AT_rich Low_complexity Low_complexity 1 22 0 2358 62 41 3 chr20 44535528 44535818 -22132187 + AluY SINE Alu 1 301 -10 1283 96 6 0 chr20 44535823 44535989 -22132016 - AluSx SINE Alu -145 167 1 1379 165 41 4 chr20 44535989 44536231 -22131774 + MSTB LTR MaLR 175 425 -1 483 224 9 17 chr20 44536242 44536358 -22131647 + MIR SINE MIR 104 218 -44 823 118 8 8 chr20 44536361 44536480 -22131525 + AluJb SINE Alu 3 121 -191 415 356 10 5 chr20 44536906 44537100 -22130905 + MIR SINE MIR 33 227 -35 249 280 40 0 chr20 44537640 44537715 -22130290 - MIR SINE MIR -76 186 109 2215 115 10 10 chr20 44537805 44538117 -22129888 - AluSx SINE Alu 0 312 1 416 249 58 90 chr20 44538574 44538765 -22129240 + MIR SINE MIR 34 218 -44 419 256 102 0 chr20 44538765 44538902 -22129103 - MIR SINE MIR -10 252 102 436 259 148 0 chr20 44539364 44539499 -22128506 - MIR3 SINE MIR -11 197 43 396 167 24 36 chr20 44541131 44541215 -22126790 + MIR3 SINE MIR 85 167 -41 272 214 18 0 chr20 44541731 44541787 -22126218 + L2 LINE L2 3181 3237 -35 263 85 21 0 chr20 44542038 44542085 -22125920 + (TTTTG)n Simple_repeat Simple_repeat 3 50 0 1430 104 0 20 chr20 44542189 44542390 -22125615 - AluSg/x SINE Alu -12 300 104 477 313 68 6 chr20 44542878 44543041 -22124964 - MIR SINE MIR -34 228 56 234 211 0 0 chr20 44543101 44543151 -22124854 + MIR SINE MIR 101 149 -64 342 353 25 11 chr20 44543527 44543716 -22124289 + MIR SINE MIR 18 214 -48 293 304 139 9 chr20 44544543 44544658 -22123347 - L2 LINE L2 -7 3265 3136 236 310 199 51 chr20 44545389 44545605 -22122400 - L2 LINE L2 -18 3254 3007 386 307 0 67 chr20 44545612 44545762 -22122243 - L2 LINE L2 -1 3312 3173 2206 108 14 7 chr20 44545829 44546126 -22121879 + AluSx SINE Alu 1 299 -13 276 230 138 0 chr20 44546267 44546354 -22121651 - HAL1 LINE L1 -826 1681 1583 618 233 88 87 chr20 44546622 44546660 -22121345 - L1ME4a LINE L1 -148 5973 5937 872 196 6 25 chr20 44546660 44546823 -22121182 + FRAM SINE Alu 1 160 -6 618 233 88 87 chr20 44546823 44547222 -22120783 - L1ME4a LINE L1 -184 5937 5539 229 312 194 0 chr20 44548438 44548531 -22119474 - L2 LINE L2 -3 3310 3200 201 318 47 47 chr20 44548787 44548916 -22119089 - L2 LINE L2 -528 2786 2658 319 197 0 3 chr20 44549127 44549198 -22118807 + MIR SINE MIR 89 146 -62 440 259 157 20 chr20 44549555 44549752 -22118253 - MIR SINE MIR -29 233 10 1164 172 0 13 chr20 44550314 44550525 -22117480 + L1 LINE L1 4534 4743 -1403 1685 145 66 52 chr20 44550525 44550814 -22117191 + AluJo SINE Alu 1 293 -19 1164 172 0 13 chr20 44550814 44550834 -22117171 + L1 LINE L1 4743 4762 -1384 432 0 0 0 chr20 44550834 44550882 -22117123 + (CA)n Simple_repeat Simple_repeat 2 49 0 2395 121 111 13 chr20 44550882 44551352 -22116653 + L1MA9 LINE L1 5797 6312 0 364 325 7 0 chr20 44551491 44551648 -22116357 - MIR SINE MIR -67 141 9 454 249 135 28 chr20 44551687 44551904 -22116101 - MIR SINE MIR 0 262 15 607 257 50 5 chr20 44551947 44552136 -22115869 - MIR SINE MIR -61 201 7 2333 109 0 0 chr20 44552977 44553279 -22114726 - AluSg SINE Alu -6 304 3 41 0 0 0 chr20 44553407 44553448 -22114557 + AT_rich Low_complexity Low_complexity 1 41 0 297 312 0 43 chr20 44553525 44553618 -22114387 - L2 LINE L2 -21 3251 3163 224 307 151 0 chr20 44554334 44554513 -22113492 + L2 LINE L2 2764 2969 -345 227 378 47 16 chr20 44554846 44554973 -22113032 + L2 LINE L2 3142 3272 0 269 319 36 36 chr20 44555346 44555371 -22112634 - MIR3 SINE MIR -22 186 162 718 277 105 67 chr20 44555371 44555906 -22112099 - MLT1H1 LTR MaLR 0 555 1 269 319 36 36 chr20 44555906 44556018 -22111987 - MIR3 SINE MIR -45 163 49 420 250 109 0 chr20 44556767 44556895 -22111110 + MIR SINE MIR 96 237 -25 2466 94 0 0 chr20 44556911 44557219 -22110786 + AluSc SINE Alu 1 308 -1 191 333 106 28 chr20 44557219 44557360 -22110645 - MIR SINE MIR -55 207 56 590 327 52 48 chr20 44557571 44558030 -22109975 - L2 LINE L2 -343 2971 2511 881 166 0 14 chr20 44558033 44558178 -22109827 + FLAM_C SINE Alu 1 143 0 269 304 289 5 chr20 44558184 44558599 -22109406 - L2 LINE L2 -798 2516 1984 361 323 189 0 chr20 44559734 44559994 -22108011 + L2 LINE L2 3005 3313 0 2298 105 0 26 chr20 44560020 44560326 -22107679 + AluSx SINE Alu 1 298 -14 190 273 102 11 chr20 44560328 44560416 -22107589 - MIR3 SINE MIR -27 181 86 276 362 81 7 chr20 44560516 44560665 -22107340 - L2 LINE L2 0 3313 3154 252 299 144 46 chr20 44560765 44560939 -22107066 - MIR SINE MIR -12 250 60 335 260 48 0 chr20 44561078 44561182 -22106823 + MIR3 SINE MIR 89 197 -11 374 239 64 0 chr20 44562042 44562151 -22105854 + MIR SINE MIR 98 213 -49 212 300 18 45 chr20 44562188 44562298 -22105707 - L2 LINE L2 -2 3311 3205 485 319 143 69 chr20 44562318 44562593 -22105412 + L1MC/D LINE L1 4532 4785 -1361 2580 52 3 10 chr20 44562593 44562899 -22105106 + AluY SINE Alu 1 304 -7 485 319 143 69 chr20 44562899 44563099 -22104906 + L1MC/D LINE L1 4785 5042 -1104 1822 171 16 0 chr20 44563101 44563406 -22104599 + AluJo SINE Alu 1 310 -2 495 281 131 40 chr20 44563600 44563862 -22104143 + L1MC/D LINE L1 5254 5557 -2251 1184 176 92 81 chr20 44563862 44563996 -22104009 + MLT1A1 LTR MaLR 1 132 -233 2163 129 7 0 chr20 44563996 44564291 -22103714 + AluSx SINE Alu 1 297 -15 1184 176 92 81 chr20 44564291 44564515 -22103490 + MLT1A1 LTR MaLR 132 363 -2 495 281 131 40 chr20 44564515 44564604 -22103401 + L1MC/D LINE L1 5557 5637 -2171 339 65 0 0 chr20 44564784 44564830 -22103175 + (TG)n Simple_repeat Simple_repeat 2 47 0 2166 88 8 0 chr20 44564847 44565110 -22102895 - AluSx SINE Alu -11 301 37 2499 58 0 39 chr20 44565155 44565465 -22102540 - AluY SINE Alu -13 298 1 22 35 0 0 chr20 44565723 44565752 -22102253 + AT_rich Low_complexity Low_complexity 1 29 0 557 323 7 36 chr20 44565946 44565990 -22102015 - L1ME LINE L1 -374 5747 5703 1629 152 57 47 chr20 44565990 44566286 -22101719 + AluJb SINE Alu 1 299 -13 557 323 7 36 chr20 44566286 44566520 -22101485 - L1ME LINE L1 -418 5703 5477 209 283 0 0 chr20 44567145 44567198 -22100807 - L2 LINE L2 -77 3236 3184 291 235 174 17 chr20 44567679 44567794 -22100211 - MIR SINE MIR -59 149 17 392 37 19 0 chr20 44567916 44567970 -22100035 + (TC)n Simple_repeat Simple_repeat 2 56 0 261 0 0 0 chr20 44567970 44567999 -22100006 + (CA)n Simple_repeat Simple_repeat 1 29 0 277 390 130 2 chr20 44568130 44568343 -22099662 - L1MC4a LINE L1 -74 6047 5863 3610 136 36 36 chr20 44568343 44568522 -22099483 - L1MA6 LINE L1 -1 6299 6121 2229 110 3 7 chr20 44568522 44568823 -22099182 - AluSx SINE Alu -12 300 1 3610 136 36 36 chr20 44568823 44568990 -22099015 - L1MA6 LINE L1 -179 6121 5955 2327 87 7 10 chr20 44568990 44569288 -22098717 - AluY SINE Alu -14 297 1 3610 136 36 36 chr20 44569288 44569682 -22098323 - L1MA6 LINE L1 -344 5956 5558 277 390 130 2 chr20 44569682 44569802 -22098203 - L1MC4a LINE L1 -258 5863 5687 516 306 130 22 chr20 44570192 44570515 -22097490 + L1ME4a LINE L1 5563 5920 -201 480 294 190 38 chr20 44570552 44570634 -22097371 + L2 LINE L2 2144 2212 -1060 1903 70 0 4 chr20 44570634 44570862 -22097143 - AluY SINE Alu -11 300 74 480 294 190 38 chr20 44570862 44571749 -22096256 + L2 LINE L2 2212 3259 -13 235 289 50 8 chr20 44571772 44571893 -22096112 + HAL1b LINE L1 1203 1328 -20 324 318 96 35 chr20 44572429 44572772 -22095233 + L2 LINE L2 2550 2913 -401 371 190 13 13 chr20 44573280 44573359 -22094646 - MIR SINE MIR -55 153 75 216 275 188 62 chr20 44573567 44573876 -22094129 + L2 LINE L2 2925 3272 0 243 220 0 0 chr20 44574519 44574569 -22093436 + MIR SINE MIR 95 144 -64 1219 59 0 0 chr20 44575232 44575368 -22092637 + AluSq/x SINE Alu 1 136 -176 251 266 101 36 chr20 44577896 44578035 -22089970 - MIR3 SINE MIR -4 204 57 185 355 73 9 chr20 44578697 44578807 -22089198 - MIR SINE MIR -74 188 72 449 301 221 3 chr20 44579008 44579333 -22088672 + L2 LINE L2 1860 2255 -1059 345 325 50 0 chr20 44579831 44579951 -22088054 + MIR SINE MIR 60 185 -77 541 301 150 4 chr20 44580702 44580928 -22087077 - MIR SINE MIR 0 262 4 365 296 49 12 chr20 44580956 44581118 -22086887 - MIR3 SINE MIR -26 182 15 395 147 0 13 chr20 44581119 44581194 -22086811 + (TTCC)n Simple_repeat Simple_repeat 4 77 0 2045 152 7 0 chr20 44581206 44581515 -22086490 - AluJo SINE Alu -1 311 1 218 390 124 6 chr20 44581921 44582098 -22085907 + MIR SINE MIR 53 250 -12 183 227 152 15 chr20 44582112 44582178 -22085827 - MIR SINE MIR -70 192 118 417 259 132 35 chr20 44582294 44582468 -22085537 + MIR SINE MIR 22 212 -50 551 276 154 31 chr20 44584222 44584648 -22083357 + L2 LINE L2 2506 2878 -435 2313 109 0 0 chr20 44584648 44584950 -22083055 - AluY SINE Alu -9 302 1 551 276 154 31 chr20 44584950 44585176 -22082829 + L2 LINE L2 2878 3302 -11 236 279 18 63 chr20 44585342 44585453 -22082552 + MIR SINE MIR 157 262 0 2189 106 3 7 chr20 44585712 44586033 -22081972 + AluSx SINE Alu 1 320 0 188 328 48 40 chr20 44586315 44586440 -22081565 - MIR3 SINE MIR -49 159 34 240 35 0 0 chr20 44586887 44586916 -22081089 + (TG)n Simple_repeat Simple_repeat 1 29 0 600 226 123 67 chr20 44587492 44587529 -22080476 + HAL1 LINE L1 838 871 -1636 2250 122 0 16 chr20 44587529 44587841 -22080164 + AluSc SINE Alu 1 307 -2 600 226 123 67 chr20 44587841 44588210 -22079795 + HAL1 LINE L1 871 1272 -1235 1892 157 34 0 chr20 44588210 44588503 -22079502 + AluJb SINE Alu 1 303 -9 600 226 123 67 chr20 44588503 44588525 -22079480 + HAL1 LINE L1 1272 1291 -1216 207 209 0 0 chr20 44589280 44589323 -22078682 - L2 LINE L2 -50 3222 3180 355 174 43 0 chr20 44589584 44589653 -22078352 - L2 LINE L2 -245 3068 2997 399 286 118 16 chr20 44589711 44589956 -22078049 - L2 LINE L2 -422 2892 2623 2339 105 0 3 chr20 44590155 44590460 -22077545 - AluSq SINE Alu -6 307 4 491 261 17 0 chr20 44590761 44590880 -22077125 + MIR SINE MIR 20 140 -122 478 282 212 23 chr20 44590863 44591207 -22076798 - L2 LINE L2 -397 2917 2509 * 250 291 13 13 chr20 44591803 44591882 -22076123 - MIR SINE MIR -5 257 179 675 276 95 0 chr20 44591896 44592106 -22075899 + MIR SINE MIR 12 241 -21 302 311 99 6 chr20 44592823 44592984 -22075021 + MIR SINE MIR 23 198 -64 2373 101 3 0 chr20 44593086 44593383 -22074622 + AluSx SINE Alu 1 298 -14 183 80 0 0 chr20 44593777 44593802 -22074203 + (GA)n Simple_repeat Simple_repeat 2 26 0 503 286 46 22 chr20 44593912 44594091 -22073914 - MIR SINE MIR -49 213 31 278 246 49 0 chr20 44594090 44594151 -22073854 - MIR SINE MIR -177 85 22 * 2180 115 3 13 chr20 44594270 44594574 -22073431 - AluSx SINE Alu -11 301 1 506 279 79 6 chr20 44594659 44594824 -22073181 + MIR SINE MIR 12 188 -74 300 215 15 0 chr20 44595424 44595489 -22072516 + MIR SINE MIR 74 139 -69 623 276 83 0 chr20 44595559 44595751 -22072254 + MIR SINE MIR 50 257 -5 2331 109 0 3 chr20 44595763 44596075 -22071930 + AluSq SINE Alu 1 311 -2 275 132 19 0 chr20 44596374 44596427 -22071578 - L2 LINE L2 -340 2973 2920 200 331 166 44 chr20 44596616 44596881 -22071124 - L2 LINE L2 -676 2638 2406 2388 96 3 0 chr20 44596881 44597182 -22070823 - AluSq SINE Alu -11 302 1 200 331 166 44 chr20 44597182 44597502 -22070503 - L2 LINE L2 -908 2406 1982 1218 243 88 48 chr20 44597520 44597601 -22070404 + MLT1D LTR MaLR 3 79 -426 2252 116 0 3 chr20 44597601 44597894 -22070111 + AluSx SINE Alu 1 292 -20 1218 243 88 48 chr20 44597894 44597905 -22070100 + MLT1D LTR MaLR 79 88 -417 1820 117 8 0 chr20 44597905 44598152 -22069853 + AluSq SINE Alu 51 299 -14 1218 243 88 48 chr20 44598152 44598536 -22069469 + MLT1D LTR MaLR 88 499 -6 316 304 118 19 chr20 44598626 44598787 -22069218 + MER5B DNA MER1_type 2 178 0 2304 119 0 0 chr20 44599225 44599537 -22068468 - AluSx SINE Alu 0 312 1 423 309 45 45 chr20 44599538 44599784 -22068221 + MLT1I LTR MaLR 158 403 -6 184 339 0 16 chr20 44600147 44600209 -22067796 - L2 LINE L2 -610 2704 2644 577 235 240 0 chr20 44600659 44600855 -22067150 - MIR SINE MIR -18 244 2 319 229 58 115 chr20 44600936 44601106 -22066899 - MIR SINE MIR -63 145 21 299 167 218 0 chr20 44601301 44601379 -22066626 - L2 LINE L2 -11 3302 3208 330 270 11 0 chr20 44601395 44601484 -22066521 - MIR SINE MIR -86 122 33 281 258 108 17 chr20 44601700 44601820 -22066185 + L2 LINE L2 3103 3233 -39 1396 180 97 7 chr20 44602570 44602848 -22065157 + AluSx SINE Alu 1 303 -9 1659 87 0 0 chr20 44602899 44603095 -22064910 + AluSg/x SINE Alu 91 286 -26 489 290 15 0 chr20 44603193 44603324 -22064681 - MIR SINE MIR -97 165 33 331 333 98 22 chr20 44604018 44604243 -22063762 - MIR SINE MIR -19 243 2 740 256 47 34 chr20 44604303 44604537 -22063468 + MIR SINE MIR 8 244 -18 2491 85 0 3 chr20 44604622 44604928 -22063077 + AluSp SINE Alu 1 305 -8 317 248 73 18 chr20 44604988 44605097 -22062908 + MIR SINE MIR 82 196 -66 2158 101 4 0 chr20 44605105 44605382 -22062623 + AluSx SINE Alu 1 278 -34 962 140 14 0 chr20 44605382 44605525 -22062480 + AluSg/x SINE Alu 148 292 -18 2399 153 27 55 chr20 44605724 44606201 -22061804 + LTR32 LTR ERVL 8 471 0 321 247 21 21 chr20 44606229 44606322 -22061683 + MER5A DNA MER1_type 11 103 -86 467 252 56 21 chr20 44606521 44606664 -22061341 + MIR SINE MIR 3 150 -112 183 306 0 0 chr20 44606970 44607019 -22060986 - MIR SINE MIR -65 143 95 2333 112 0 0 chr20 44607200 44607504 -22060501 - AluY SINE Alu -7 304 1 2099 118 0 20 chr20 44607886 44608191 -22059814 - AluJo SINE Alu -1 311 13 202 239 0 0 chr20 44608774 44608820 -22059185 - MIR SINE MIR -115 147 102 42 71 0 0 chr20 44609199 44609283 -22058722 + GC_rich Low_complexity Low_complexity 1 84 0 652 303 49 26 chr20 44609736 44610188 -22057817 + L1ME3A LINE L1 5618 5951 -219 454 139 0 0 chr20 44610204 44610331 -22057674 - AluSg/x SINE Alu 0 331 205 601 86 0 0 chr20 44610369 44610450 -22057555 - AluSq SINE Alu -109 204 124 2138 120 13 3 chr20 44610450 44610759 -22057246 - AluSx SINE Alu 0 312 1 186 326 101 22 chr20 44610852 44611030 -22056975 - L2 LINE L2 -443 2871 2680 * 522 223 147 32 chr20 44611027 44611184 -22056821 + MER5A DNA MER1_type 9 183 -6 2111 104 18 73 chr20 44611398 44611445 -22056560 - THE1B LTR MaLR 0 364 316 2299 87 3 39 chr20 44611445 44611754 -22056251 + AluSp SINE Alu 3 300 -13 2111 104 18 73 chr20 44611754 44612091 -22055914 - THE1B LTR MaLR -48 316 1 483 335 49 18 chr20 44612167 44612391 -22055614 - MIR SINE MIR 0 262 32 1883 239 69 10 chr20 44612510 44613030 -22054975 + MLT1H1 LTR MaLR 3 553 -2 880 239 39 27 chr20 44613180 44613439 -22054566 + LTR33 LTR ERVL 12 273 -248 2132 133 0 0 chr20 44613508 44613794 -22054211 - AluSx SINE Alu -26 286 1 1006 247 131 24 chr20 44613883 44614219 -22053786 - LTR16C LTR ERVL -7 484 113 542 184 0 0 chr20 44614306 44614404 -22053601 + LTR33 LTR ERVL 424 521 0 1691 70 0 0 chr20 44614614 44614814 -22053191 + AluSx SINE Alu 1 200 -112 238 136 0 0 chr20 44614814 44614858 -22053147 + AluSx SINE Alu 254 297 -3 366 239 92 18 chr20 44614883 44614992 -22053013 + MIR SINE MIR 56 172 -90 389 286 238 0 chr20 44615040 44615250 -22052755 - Charlie8 DNA MER1_type -2132 285 26 1032 229 57 15 chr20 44615339 44615601 -22052404 - MLT1J LTR MaLR -2 509 237 1237 126 11 0 chr20 44615617 44615800 -22052205 - AluY SINE Alu -7 304 120 410 226 38 19 chr20 44615845 44615951 -22052054 - MLT1J LTR MaLR -361 150 43 2020 136 3 3 chr20 44615965 44616252 -22051753 + AluSg SINE Alu 9 295 -15 1660 191 87 6 chr20 44616512 44616878 -22051127 - MSTD LTR MaLR 0 396 1 752 272 63 68 chr20 44616970 44617367 -22050638 - HAL1 LINE L1 -2112 395 1 389 250 45 27 chr20 44618041 44618153 -22049852 + MER81 DNA DNA 1 114 0 1179 194 40 111 chr20 44618217 44618639 -22049366 - MSTD LTR MaLR -4 392 1 2150 117 3 3 chr20 44618711 44619002 -22049003 - AluSq SINE Alu -22 291 1 871 268 26 17 chr20 44619027 44619258 -22048747 + MIR SINE MIR 6 238 -24 600 212 222 68 chr20 44619262 44619555 -22048450 - MER46C DNA MER2_type 0 338 1 2434 94 3 0 chr20 44620085 44620383 -22047622 + AluSx SINE Alu 2 300 -12 262 272 49 0 chr20 44620412 44620493 -22047512 - L2 LINE L2 -1 3312 3228 2228 125 3 0 chr20 44621044 44621355 -22046650 + AluSx SINE Alu 1 312 0 195 263 53 21 chr20 44621368 44621388 -22046617 + MIR SINE MIR 31 49 -159 186 103 0 0 chr20 44621388 44621417 -22046588 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 195 263 53 21 chr20 44621417 44621491 -22046514 + MIR SINE MIR 49 128 -80 * 212 333 21 10 chr20 44621490 44621586 -22046419 - L2 LINE L2 -32 3281 3185 1082 237 23 8 chr20 44621690 44621952 -22046053 + MER69 DNA AcHobo 6 271 -2255 860 172 116 0 chr20 44621949 44622159 -22045846 + MER69 DNA AcHobo 1859 2093 -433 697 142 0 0 chr20 44622159 44622265 -22045740 - Tigger7 DNA MER2_type 0 2487 2382 * 1236 201 41 45 chr20 44622257 44622525 -22045480 - Tigger7 DNA MER2_type -2220 267 1 691 194 90 45 chr20 44622525 44622580 -22045425 + MER69 DNA AcHobo 2091 2142 -384 1666 216 0 0 chr20 44622580 44622876 -22045129 + AluJo SINE Alu 1 296 -16 2343 100 33 0 chr20 44622880 44623180 -22044825 + AluSx SINE Alu 1 310 -2 691 194 90 45 chr20 44623180 44623341 -22044664 + MER69 DNA AcHobo 2144 2322 -204 387 346 96 26 chr20 44623535 44623919 -22044086 - L3 LINE CR1 -27 1550 1140 782 176 28 112 chr20 44624331 44624398 -22043607 + MER83B-int LTR ERV1 1526 1597 -4734 2961 3 0 0 chr20 44624398 44624707 -22043298 + AluYa5 SINE Alu 1 309 -2 782 176 28 112 chr20 44624707 44624962 -22043043 + MER83B-int LTR ERV1 1597 1821 -4510 337 154 77 0 chr20 44624953 44625018 -22042987 + MER83B-int LTR ERV1 2741 2810 -3521 * 468 83 17 175 chr20 44625018 44625057 -22042948 + U6 snRNA snRNA 1 45 -62 2199 113 0 0 chr20 44625057 44625371 -22042634 + AluSx SINE Alu 1 314 0 468 83 17 175 chr20 44625371 44625450 -22042555 + U6 snRNA snRNA 45 101 -6 27 29 0 0 chr20 44625450 44625484 -22042521 + AT_rich Low_complexity Low_complexity 1 34 0 1837 133 71 10 chr20 44625484 44625778 -22042227 + AluSx SINE Alu 1 312 0 420 245 36 82 chr20 44625841 44626031 -22041974 + MER83B-int LTR ERV1 1705 1877 -3059 1914 160 0 29 chr20 44626031 44626338 -22041667 + AluJo SINE Alu 1 298 -14 420 245 36 82 chr20 44626338 44626453 -22041552 + MER83B-int LTR ERV1 1877 1996 -2940 2287 89 24 3 chr20 44626470 44626762 -22041243 + AluSx SINE Alu 1 298 -14 425 213 27 133 chr20 44626762 44627073 -22040932 + MER83B-int LTR ERV1 2762 3116 -1927 * 864 133 22 133 chr20 44627070 44627239 -22040766 + MER83B-int LTR ERV1 4169 4355 -3765 2236 131 0 3 chr20 44627239 44627552 -22040453 - AluSx SINE Alu 0 312 1 864 133 22 133 chr20 44627552 44627698 -22040307 + MER83B-int LTR ERV1 4350 4449 -3666 1298 158 89 117 chr20 44627698 44628161 -22039844 + LTR7 LTR ERV1 1 450 0 1114 205 20 21 chr20 44628161 44628589 -22039416 + HERVH LTR ERV1 1 459 -7254 14714 177 15 27 chr20 44628647 44633344 -22034661 + HERVH LTR ERV1 590 5020 -2287 2537 121 16 12 chr20 44633348 44633777 -22034228 + HERVH LTR ERV1 7283 7713 0 1256 158 81 118 chr20 44633777 44634244 -22033761 + LTR7 LTR ERV1 1 450 0 558 133 19 19 chr20 44634244 44634349 -22033656 + LTR49-int LTR ERV1 3978 4082 -2249 312 219 0 0 chr20 44634359 44634419 -22033586 + MLT1L LTR MaLR 412 471 -144 1387 191 0 54 chr20 44634419 44634476 -22033529 + MER41D LTR ERV1 1 60 -497 2261 135 0 0 chr20 44634476 44634788 -22033217 + AluSx SINE Alu 1 312 0 1387 191 0 54 chr20 44634788 44635035 -22032970 + MER41D LTR ERV1 60 290 -267 2484 71 14 0 chr20 44635035 44635330 -22032675 - AluY SINE Alu -12 299 1 23 22 0 44 chr20 44635339 44635367 -22032638 + AT_rich Low_complexity Low_complexity 1 28 -15 2052 148 3 13 chr20 44635367 44635672 -22032333 + AluSx SINE Alu 1 302 -10 23 22 0 44 chr20 44635672 44635688 -22032317 + AT_rich Low_complexity Low_complexity 28 43 0 340 288 14 5 chr20 44635694 44635849 -22032156 - L2 LINE L2 -349 2964 2741 496 266 19 77 chr20 44635995 44636254 -22031751 - L2 LINE L2 -173 3099 2856 585 276 109 0 chr20 44636291 44636501 -22031504 - L1ME4a LINE L1 -233 5888 5656 538 250 62 7 chr20 44636820 44636964 -22031041 + MIR SINE MIR 46 197 -65 1224 151 69 75 chr20 44637055 44637122 -22030883 - L1MB8 LINE L1 -2 6176 6110 2309 115 0 0 chr20 44637122 44637426 -22030579 + AluSx SINE Alu 1 304 -8 1224 151 69 75 chr20 44637426 44637631 -22030374 - L1MB8 LINE L1 -68 6110 5904 1909 144 10 13 chr20 44637631 44637930 -22030075 - AluJo SINE Alu -14 298 1 1224 151 69 75 chr20 44637930 44637961 -22030044 - L1MB8 LINE L1 -274 5904 5874 778 187 0 13 chr20 44637960 44638115 -22029890 - L1ME4a LINE L1 -630 5554 5402 * 2167 84 3 84 chr20 44638294 44638614 -22029391 - AluSc SINE Alu -15 294 1 2127 138 0 0 chr20 44638641 44638939 -22029066 + AluSx SINE Alu 1 298 -14 330 89 0 0 chr20 44639434 44639479 -22028526 - MIR SINE MIR -101 161 117 394 248 4 6 chr20 44640187 44640289 -22027716 + MIR SINE MIR 40 140 -68 346 292 39 15 chr20 44640318 44640448 -22027557 - L2 LINE L2 -12 3301 3169 401 203 21 11 chr20 44640808 44640929 -22027076 - MIR SINE MIR -56 152 28 332 276 52 81 chr20 44641274 44641484 -22026521 - MIR SINE MIR 0 262 59 674 241 77 0 chr20 44641558 44641728 -22026277 + MER69 DNA AcHobo 1 183 -1043 182 180 120 0 chr20 44641728 44641778 -22026227 + L2 LINE L2 3254 3309 -4 184 296 20 10 chr20 44641930 44642028 -22025977 - L2 LINE L2 -499 2815 2717 463 305 33 29 chr20 44642538 44642748 -22025257 - MIR SINE MIR -6 256 46 421 278 89 100 chr20 44643011 44643215 -22024790 + L1ME3A LINE L1 5335 5537 -2271 2424 96 0 6 chr20 44643215 44643528 -22024477 + AluSx SINE Alu 1 311 -1 421 278 89 100 chr20 44643528 44643604 -22024401 + L1ME3A LINE L1 5537 5612 -2196 292 273 15 0 chr20 44643648 44643714 -22024291 + MER33 DNA MER1_type 1 67 -257 1418 143 14 0 chr20 44643715 44643924 -22024081 + AluSg/x SINE Alu 85 296 -14 756 170 69 53 chr20 44643924 44644069 -22023936 + MER33 DNA MER1_type 56 208 -2377 2277 122 0 13 chr20 44644069 44644381 -22023624 - AluSx SINE Alu -4 308 1 756 170 69 53 chr20 44644381 44644482 -22023523 + MER33 DNA MER1_type 208 306 -18 2739 167 15 9 chr20 44644491 44645025 -22022980 - L1MB3 LINE L1 -3 6180 5644 1570 250 96 5 chr20 44645055 44645491 -22022514 + L1ME3A LINE L1 5695 6170 0 505 216 60 0 chr20 44645496 44645612 -22022393 + L1MC/D LINE L1 5613 5735 -2073 3778 150 16 36 chr20 44645612 44646113 -22021892 + L1MB3 LINE L1 5442 5951 -232 2480 83 3 0 chr20 44646113 44646413 -22021592 + AluSx SINE Alu 1 301 -11 3778 150 16 36 chr20 44646413 44646615 -22021390 + L1MB3 LINE L1 5951 6132 -51 2409 91 0 0 chr20 44646615 44646912 -22021093 - AluY SINE Alu -10 301 5 3778 150 16 36 chr20 44646912 44646961 -22021044 + L1MB3 LINE L1 6132 6180 -3 1854 124 4 15 chr20 44647860 44648119 -22019886 + AluSx SINE Alu 35 290 -22 600 191 177 47 chr20 44648225 44648440 -22019565 - MLT1H LTR MaLR -302 247 5 317 263 12 0 chr20 44648460 44648540 -22019465 - MLT1J1 LTR MaLR -358 88 8 209 192 0 0 chr20 44648668 44648718 -22019287 + MIR SINE MIR 101 149 -113 453 178 0 11 chr20 44649479 44649569 -22018436 - MIR SINE MIR -102 160 72 378 109 0 0 chr20 44649699 44649754 -22018251 + MLT1I LTR MaLR 355 409 0 2417 149 37 12 chr20 44649840 44650329 -22017676 - L1MB3 LINE L1 -3 6180 5680 205 254 91 0 chr20 44650376 44650431 -22017574 + MIR SINE MIR 48 107 -101 331 273 43 43 chr20 44650745 44650884 -22017121 - MIR3 SINE MIR -8 200 62 1058 262 130 13 chr20 44651008 44651393 -22016612 - MLT1J1 LTR MaLR -16 430 1 991 275 85 19 chr20 44651399 44651777 -22016228 + MLT1L LTR MaLR 209 611 -4 275 273 0 0 chr20 44651828 44651894 -22016111 - MLT1J2 LTR MaLR -16 434 369 575 251 63 24 chr20 44652059 44652266 -22015739 + MIR SINE MIR 35 249 -13 306 344 61 0 chr20 44652264 44652395 -22015610 - MIR SINE MIR -78 184 46 * 414 301 158 5 chr20 44652398 44652484 -22015521 - MIR SINE MIR -17 245 174 183 80 0 0 chr20 44652484 44652509 -22015496 + (TTA)n Simple_repeat Simple_repeat 2 26 0 414 301 158 5 chr20 44652509 44652631 -22015374 - MIR SINE MIR -88 174 5 605 295 37 34 chr20 44652801 44653069 -22014936 + L3 LINE CR1 1306 1574 -3 1152 251 82 36 chr20 44653340 44653394 -22014611 + MLT1I LTR MaLR 1 51 -358 1972 165 40 0 chr20 44653394 44653745 -22014260 - MLT1A1 LTR MaLR 0 365 1 1152 251 82 36 chr20 44653745 44654081 -22013924 + MLT1I LTR MaLR 51 409 0 250 278 204 0 chr20 44654609 44654717 -22013288 + L2 LINE L2 3026 3155 -158 1315 86 0 65 chr20 44654719 44654905 -22013100 - AluSc SINE Alu -3 306 133 237 244 84 34 chr20 44654999 44655118 -22012887 - L1MC4 LINE L1 -1 8041 7917 2562 67 0 0 chr20 44655181 44655480 -22012525 + AluY SINE Alu 1 299 -12 300 274 116 11 chr20 44655480 44655575 -22012430 + L2 LINE L2 3208 3312 -1 843 229 11 6 chr20 44655578 44655757 -22012248 - MIR SINE MIR -72 190 11 320 259 32 125 chr20 44656231 44656363 -22011642 + MIR SINE MIR 48 154 -108 522 245 80 6 chr20 44656363 44656526 -22011479 - MER96 DNA MER1_type 0 175 1 320 259 32 125 chr20 44656526 44656609 -22011396 + MIR SINE MIR 154 243 -19 2287 110 3 25 chr20 44656636 44656813 -22011192 - AluSx SINE Alu -1 311 143 2631 44 0 3 chr20 44656813 44657111 -22010894 - AluY SINE Alu -14 297 1 2287 110 3 25 chr20 44657111 44657251 -22010754 - AluSx SINE Alu -169 143 1 863 308 4 0 chr20 44657469 44657696 -22010309 - MIR SINE MIR 0 262 35 217 408 0 8 chr20 44658043 44658163 -22009842 - MIR SINE MIR -109 153 35 348 321 115 0 chr20 44658906 44659071 -22008934 + MIR SINE MIR 4 187 -75 222 266 16 0 chr20 44659565 44659629 -22008376 - MIR SINE MIR -21 241 177 2053 110 37 0 chr20 44659629 44659969 -22008036 - AluSx SINE Alu 0 350 1 766 249 0 17 chr20 44659997 44660174 -22007831 - MIR SINE MIR -68 194 21 366 208 0 62 chr20 44661044 44661140 -22006865 - MIR SINE MIR -55 153 64 969 223 35 0 chr20 44661231 44661428 -22006577 + MIR SINE MIR 2 205 -57 294 272 29 0 chr20 44662281 44662384 -22005621 - MIR3 SINE MIR -21 187 82 518 267 53 72 chr20 44662525 44662885 -22005120 + L2 LINE L2 2827 3179 -93 561 201 6 17 chr20 44662953 44663127 -22004878 + (TGGA)n Simple_repeat Simple_repeat 1 172 0 451 311 61 18 chr20 44663507 44663671 -22004334 - MIR3 SINE MIR -1 207 37 230 208 38 0 chr20 44663675 44663728 -22004277 - L2 LINE L2 0 3313 3259 409 259 88 25 chr20 44664690 44664927 -22003078 + L1M4 LINE L1 3677 3929 -2217 1212 315 46 41 chr20 44664945 44665139 -22002866 + L1M4 LINE L1 3365 3557 -2589 2114 144 3 3 chr20 44665139 44665444 -22002561 - AluJb SINE Alu -7 305 1 1212 315 46 41 chr20 44665444 44666322 -22001683 + L1M4 LINE L1 3557 4442 -1704 1803 159 34 10 chr20 44666360 44666655 -22001350 + AluJb SINE Alu 1 302 -10 320 0 25 0 chr20 44666715 44666755 -22001250 + (CA)n Simple_repeat Simple_repeat 2 42 0 717 236 94 81 chr20 44666803 44667184 -22000821 - MLT1J LTR MaLR -125 386 1 296 279 0 0 chr20 44667215 44667283 -22000722 - MIR SINE MIR -83 125 58 2446 89 0 0 chr20 44667619 44667923 -22000082 - AluSx SINE Alu -8 304 1 200 226 0 0 chr20 44667991 44668042 -21999963 - MIR SINE MIR -108 154 105 437 235 45 52 chr20 44668069 44668225 -21999780 + MLT1I LTR MaLR 1 155 -254 456 240 247 7 chr20 44668277 44668423 -21999582 - MER5A DNA MER1_type 0 189 9 276 245 15 13 chr20 44668450 44668540 -21999465 + MLT1I LTR MaLR 316 389 -20 516 235 87 0 chr20 44668623 44668738 -21999267 + MER96 DNA MER1_type? 51 175 0 446 194 104 35 chr20 44669413 44669557 -21998448 + L1ME3 LINE L1 5939 6092 -70 827 203 40 0 chr20 44669576 44669814 -21998191 + AluJb SINE Alu 130 373 0 399 270 43 9 chr20 44669957 44670072 -21997933 + MIR SINE MIR 34 152 -110 2496 208 40 34 chr20 44670165 44670633 -21997372 + MER97a DNA MER1_type? 1 476 -418 1858 128 36 23 chr20 44670633 44670937 -21997068 - AluSx SINE Alu -4 308 1 2496 208 40 34 chr20 44670937 44671152 -21996853 + MER97a DNA MER1_type? 476 688 -206 437 190 10 10 chr20 44671155 44671255 -21996750 + MER97b DNA MER1_type? 954 1053 0 320 302 108 31 chr20 44671748 44671970 -21996035 + L2 LINE L2 2847 3085 -187 309 51 0 0 chr20 44672550 44672589 -21995416 + (CA)n Simple_repeat Simple_repeat 1 39 0 357 207 0 0 chr20 44672692 44672779 -21995226 + (TG)n Simple_repeat Simple_repeat 1 87 0 196 255 0 0 chr20 44673106 44673157 -21994848 + MIR SINE MIR 81 131 -77 296 221 65 0 chr20 44673571 44673648 -21994357 - MIR SINE MIR -117 145 64 223 295 47 87 chr20 44674306 44674455 -21993550 - MIR SINE MIR -70 192 50 381 269 192 16 chr20 44674569 44674751 -21993254 + MIR SINE MIR 22 235 -27 2452 96 0 13 chr20 44675064 44675378 -21992627 + AluSg SINE Alu 1 310 0 350 255 21 32 chr20 44675415 44675509 -21992496 - MER5A DNA MER1_type -88 101 9 217 284 39 69 chr20 44676183 44676285 -21991720 + MIR3 SINE MIR 60 158 -50 347 305 26 26 chr20 44676287 44676441 -21991564 - MER5A DNA MER1_type 0 189 36 772 234 104 14 chr20 44676668 44676842 -21991163 - MIR SINE MIR -19 243 43 2224 114 3 3 chr20 44676842 44677150 -21990855 + AluSx SINE Alu 1 308 -4 772 234 104 14 chr20 44677150 44677197 -21990808 - MIR SINE MIR -219 43 2 437 276 69 17 chr20 44677941 44678115 -21989890 - MIR SINE MIR 0 262 80 825 179 68 24 chr20 44678286 44678493 -21989512 - MER20 DNA MER1_type 0 219 4 340 192 0 0 chr20 44678542 44678615 -21989390 + HAL1 LINE L1 2435 2507 0 1954 163 3 16 chr20 44678694 44679007 -21988998 + AluJo SINE Alu 1 309 -3 854 197 101 0 chr20 44679200 44679398 -21988607 - MIR SINE MIR -11 251 34 1729 182 124 47 chr20 44679805 44679935 -21988070 + L2 LINE L2 2346 2465 -849 2154 120 3 23 chr20 44679935 44680243 -21987762 - AluSx SINE Alu -10 302 1 1729 182 124 47 chr20 44680243 44680683 -21987322 + L2 LINE L2 2465 2960 -354 202 324 15 0 chr20 44680710 44680778 -21987227 + MIR SINE MIR 173 241 -21 422 263 246 6 chr20 44680802 44680973 -21987032 - MIR SINE MIR -14 248 37 184 260 0 0 chr20 44681250 44681300 -21986705 + L2 LINE L2 3217 3266 -6 258 159 0 0 chr20 44681634 44681678 -21986327 - MIR SINE MIR -147 115 72 430 258 29 16 chr20 44681870 44682018 -21985987 - MIR SINE MIR -63 145 27 2235 126 0 0 chr20 44682625 44682927 -21985078 + AluSq SINE Alu 1 302 -11 21 0 0 0 chr20 44683009 44683030 -21984975 + AT_rich Low_complexity Low_complexity 1 21 0 34 72 0 0 chr20 44683120 44683189 -21984816 + AT_rich Low_complexity Low_complexity 1 69 0 770 230 17 17 chr20 44683476 44683650 -21984355 + MIR SINE MIR 62 235 -27 1183 160 39 0 chr20 44683862 44684068 -21983937 - MER20 DNA MER1_type 0 219 6 387 290 148 24 chr20 44684328 44684497 -21983508 - MIR SINE MIR -3 259 70 2053 94 19 66 chr20 44685454 44685774 -21982231 - AluSp SINE Alu -8 305 1 275 170 113 0 chr20 44685774 44685827 -21982178 - MIR SINE MIR -3 259 201 196 53 53 0 chr20 44685965 44686003 -21982002 + A-rich Low_complexity Low_complexity 3 42 0 374 343 0 6 chr20 44686137 44686155 -21981850 - L1MA10 LINE L1 0 6334 6317 1343 217 7 7 chr20 44686155 44686445 -21981560 - L1ME2 LINE L1 -9 6155 5866 349 320 126 4 chr20 44686570 44686817 -21981188 - LTR33A LTR ERVL -213 310 34 305 303 143 0 chr20 44687328 44687447 -21980558 - MIR SINE MIR -78 184 49 742 267 17 0 chr20 44687475 44687655 -21980350 + MIR SINE MIR 13 195 -67 2243 106 0 0 chr20 44687668 44687982 -21980023 + AluSx SINE Alu 1 314 0 3289 122 14 4 chr20 44687982 44688475 -21979530 + LTR3b LTR ERVK 3 500 0 249 118 0 0 chr20 44688475 44688509 -21979496 + LTR3b LTR ERVK 463 496 -4 213 39 0 0 chr20 44688509 44688535 -21979470 + (TAAAA)n Simple_repeat Simple_repeat 4 29 0 361 216 49 39 chr20 44688536 44688638 -21979367 + MIR SINE MIR 91 193 -69 2332 88 7 7 chr20 44688642 44688938 -21979067 + AluSx SINE Alu 1 296 -16 2456 101 127 12 chr20 44689613 44690030 -21977975 - MER4C LTR ERV1 0 465 1 189 222 74 0 chr20 44690055 44690109 -21977896 - MIR SINE MIR -95 167 110 400 186 18 0 chr20 44690174 44690287 -21977718 + CT-rich Low_complexity Low_complexity 1 115 0 621 214 67 31 chr20 44690321 44690357 -21977648 - L1ME3A LINE L1 0 6170 6137 2071 136 10 3 chr20 44690357 44690667 -21977338 + AluJb SINE Alu 1 312 0 621 214 67 31 chr20 44690667 44690854 -21977151 - L1ME3A LINE L1 -33 6137 5939 487 132 189 9 chr20 44690854 44690960 -21977045 + MER5A DNA MER1_type 28 152 -37 3808 91 24 0 chr20 44691415 44691956 -21976049 + MER41A LTR ERV1 1 554 0 806 90 49 0 chr20 44692365 44692487 -21975518 - MER41B LTR ERV1 -13 622 495 670 75 11 0 chr20 44692496 44692590 -21975415 + MER41A LTR ERV1 98 192 -362 3875 82 26 11 chr20 44692930 44693476 -21974529 - MER41A LTR ERV1 0 554 1 799 178 77 24 chr20 44693498 44693667 -21974338 - MER97b DNA MER1_type? -875 178 1 859 215 74 48 chr20 44693692 44694002 -21974003 - MLT1J2 LTR MaLR -68 382 54 731 280 68 81 chr20 44694249 44694487 -21973518 + MLT1J2 LTR MaLR 38 271 -179 923 191 62 0 chr20 44694487 44694665 -21973340 - MER5A DNA MER1_type 0 189 1 731 280 68 81 chr20 44694665 44694823 -21973182 + MLT1J2 LTR MaLR 271 429 -21 329 44 44 0 chr20 44694844 44694889 -21973116 + MLT1K LTR MaLR 542 588 0 190 333 13 0 chr20 44695527 44695602 -21972403 - MIR SINE MIR -103 105 30 2168 127 7 3 chr20 44695740 44696047 -21971958 + AluJb SINE Alu 5 312 0 1120 227 140 12 chr20 44696205 44696548 -21971457 - MLT1J2 LTR MaLR 0 450 64 311 163 0 0 chr20 44697068 44697130 -21970875 + Alu SINE Alu 1 46 -254 196 195 24 0 chr20 44697248 44697289 -21970716 + MIR SINE MIR 17 58 -204 349 211 0 40 chr20 44697289 44697365 -21970640 - FRAM/FAM SINE Alu -99 67 1 * 359 203 0 0 chr20 44697365 44697436 -21970569 + MER3 DNA MER1_type 134 204 -5 361 284 149 7 chr20 44697782 44697930 -21970075 + MIR SINE MIR 84 252 -10 2326 103 0 10 chr20 44698042 44698344 -21969661 + AluSq SINE Alu 1 299 -14 277 211 0 53 chr20 44698356 44698432 -21969573 - L1MC5 LINE L1 -48 7913 7842 356 159 0 0 chr20 44698461 44698524 -21969481 - AluJb SINE Alu 0 302 240 1736 137 27 12 chr20 44698539 44698795 -21969210 - AluJb SINE Alu -52 260 1 541 231 141 0 chr20 44699458 44699614 -21968391 - MIR SINE MIR -7 255 78 289 298 95 25 chr20 44699645 44699803 -21968202 + MIR SINE MIR 65 233 -29 261 252 37 89 chr20 44700358 44700493 -21967512 + MIR SINE MIR 20 147 -115 556 303 16 43 chr20 44700651 44700766 -21967239 - MIR SINE MIR -68 194 84 1867 157 66 36 chr20 44700766 44701130 -21966875 + THE1C LTR MaLR 1 375 0 556 303 16 43 chr20 44701130 44701199 -21966806 - MIR SINE MIR -178 84 15 760 200 39 7 chr20 44701699 44701854 -21966151 - MLT1J2 LTR MaLR 0 505 346 898 247 97 21 chr20 44701961 44702240 -21965765 - MLT1J2 LTR MaLR -100 350 51 252 289 123 96 chr20 44702281 44702613 -21965392 + L2 LINE L2 2593 2933 -381 874 163 0 9 chr20 44702803 44703036 -21964969 + GA-rich Low_complexity Low_complexity 1 231 0 265 57 0 0 chr20 44703038 44703073 -21964932 + (GGAA)n Simple_repeat Simple_repeat 3 37 0 248 281 61 0 chr20 44703722 44703804 -21964201 + MIR SINE MIR 49 135 -73 467 277 13 32 chr20 44703973 44704128 -21963877 + MIR SINE MIR 35 186 -76 346 310 116 0 chr20 44704204 44704333 -21963672 + L2 LINE L2 3168 3311 -2 502 333 59 14 chr20 44704638 44704857 -21963148 + MIR SINE MIR 13 241 -21 366 257 79 36 chr20 44705402 44705542 -21962463 + MIR SINE MIR 68 213 -49 373 329 63 0 chr20 44705685 44705843 -21962162 - L2 LINE L2 -5 3267 3100 788 280 32 29 chr20 44706064 44706208 -21961797 - L1MC4a LINE L1 -1856 5952 5810 1099 131 79 65 chr20 44706208 44706422 -21961583 - MER20 DNA MER1_type -1 218 2 788 280 32 29 chr20 44706422 44706652 -21961353 - L1MC4a LINE L1 -1998 5810 5577 1505 252 57 14 chr20 44707017 44707458 -21960547 - L1ME1 LINE L1 0 6166 5707 24 0 0 0 chr20 44708099 44708123 -21959882 + GC_rich Low_complexity Low_complexity 1 24 0 400 288 25 0 chr20 44708988 44709106 -21958899 + MIR3 SINE MIR 39 159 -49 300 246 46 32 chr20 44709951 44710095 -21957910 + MIR SINE MIR 43 182 -62 247 268 62 0 chr20 44710551 44710648 -21957357 + MIR SINE MIR 43 145 -63 280 257 73 37 chr20 44710793 44710902 -21957103 + MIR3 SINE MIR 69 181 -27 422 305 90 18 chr20 44714046 44714213 -21953792 - MIR SINE MIR -20 242 64 488 256 73 7 chr20 44714828 44714965 -21953040 - L2 LINE L2 -6 3266 3121 504 218 158 30 chr20 44715812 44715977 -21952028 + MER5A DNA MER1_type 4 189 0 1090 272 171 12 chr20 44716020 44716447 -21951558 + MLT1K LTR MaLR 20 514 -74 332 185 157 19 chr20 44716515 44716623 -21951382 + MIR SINE MIR 103 225 -37 180 265 0 102 chr20 44716649 44716700 -21951305 - MIR SINE MIR -50 212 174 1895 134 0 49 chr20 44716700 44717028 -21950977 - AluSx SINE Alu 0 312 1 180 265 0 102 chr20 44717028 44717074 -21950931 - MIR SINE MIR -88 174 125 542 240 64 79 chr20 44718165 44718432 -21949573 - L2 LINE L2 0 3313 3051 558 241 95 0 chr20 44718634 44718792 -21949213 - MIR SINE MIR -21 241 69 1184 253 98 22 chr20 44718871 44719238 -21948767 + LTR16C LTR ERVL 97 491 0 202 311 0 0 chr20 44719248 44719309 -21948696 - MIR SINE MIR -200 62 2 2226 109 14 43 chr20 44719435 44719782 -21948223 - MER1B DNA MER1_type 0 337 1 257 286 14 0 chr20 44720329 44720399 -21947606 + MIR SINE MIR 69 139 -123 529 245 42 4 chr20 44720683 44720829 -21947176 + MIR SINE MIR 69 219 -43 1314 100 0 0 chr20 44721412 44721722 -21946283 + (TCCA)n Simple_repeat Simple_repeat 1 310 0 861 275 16 24 chr20 44722446 44722697 -21945308 - MIR SINE MIR -13 249 1 585 282 82 25 chr20 44722733 44722978 -21945027 + MIR SINE MIR 3 261 -1 207 0 0 0 chr20 44722978 44723001 -21945004 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 631 245 35 0 chr20 44723629 44723772 -21944233 - MER117 DNA MER1_type -43 154 7 216 268 36 80 chr20 44723774 44723886 -21944119 - L2 LINE L2 -248 3024 2918 312 319 82 43 chr20 44723993 44724200 -21943805 - L2 LINE L2 -678 2636 2422 1261 280 82 17 chr20 44724221 44724682 -21943323 + LTR16C LTR ERVL 1 491 0 275 295 77 0 chr20 44724958 44725036 -21942969 + MLT1L LTR MaLR 435 518 -97 994 214 22 27 chr20 44725067 44725291 -21942714 + MIR SINE MIR 20 242 -20 540 232 192 0 chr20 44725329 44725480 -21942525 - MER5A DNA MER1_type 0 189 10 211 269 15 30 chr20 44725701 44725768 -21942237 + L2 LINE L2 3243 3308 -5 210 250 67 0 chr20 44726230 44726290 -21941715 - MIR SINE MIR -4 258 195 808 238 78 9 chr20 44726374 44726605 -21941400 - MIR SINE MIR 0 262 16 183 326 0 0 chr20 44726740 44726789 -21941216 + MIR SINE MIR 99 147 -115 311 281 0 12 chr20 44726898 44726980 -21941025 - MIR SINE MIR -93 115 35 188 119 0 48 chr20 44727093 44727135 -21940870 + (TCC)n Simple_repeat Simple_repeat 3 42 0 184 245 51 82 chr20 44727275 44727373 -21940632 + MIR3 SINE MIR 12 106 -102 786 212 114 5 chr20 44727376 44727560 -21940445 + MER3 DNA MER1_type 1 204 -5 271 330 119 17 chr20 44727689 44727807 -21940198 + MIR3 SINE MIR 31 160 -48 306 286 59 17 chr20 44728030 44728166 -21939839 + MER5A DNA MER1_type 43 178 0 690 201 70 100 chr20 44728329 44728558 -21939447 - MIR SINE MIR -5 257 36 256 250 33 0 chr20 44729176 44729236 -21938769 - MIR SINE MIR -6 256 195 944 225 9 65 chr20 44729241 44729472 -21938533 - MER20 DNA MER1_type 0 219 2 455 279 8 0 chr20 44729476 44729598 -21938407 + MIR SINE MIR 33 155 -107 625 291 66 38 chr20 44729635 44729924 -21938081 + L2 LINE L2 3004 3300 -13 369 255 76 19 chr20 44729943 44730100 -21937905 - MIR SINE MIR -75 187 22 200 200 0 0 chr20 44730513 44730563 -21937442 + (CA)n Simple_repeat Simple_repeat 1 50 0 3529 83 11 0 chr20 44731732 44732178 -21935827 + MLT2A2 LTR ERVL 1 451 -2 592 275 81 74 chr20 44732808 44733226 -21934779 + LTR16C LTR ERVL 71 491 0 1785 129 68 14 chr20 44733466 44733760 -21934245 + AluJb SINE Alu 1 310 -2 260 235 86 0 chr20 44734040 44734121 -21933884 + MIR SINE MIR 111 198 -64 737 236 48 44 chr20 44734211 44734440 -21933565 - MIR SINE MIR -15 247 18 473 252 103 23 chr20 44734893 44735107 -21932898 - MIR SINE MIR -18 244 14 187 358 37 46 chr20 44735146 44735255 -21932750 - MIR SINE MIR -68 194 87 377 263 170 41 chr20 44735736 44735863 -21932142 - MIR3 SINE MIR -6 202 46 1651 158 54 0 chr20 44735863 44736142 -21931863 + AluJo SINE Alu 1 294 -18 377 263 170 41 chr20 44736142 44736185 -21931820 - MIR3 SINE MIR -162 46 10 676 197 0 15 chr20 44736221 44736358 -21931647 + MIR SINE MIR 2 136 -126 292 343 74 14 chr20 44736359 44736575 -21931430 + L2 LINE L2 2628 2856 -458 2082 240 35 39 chr20 44736706 44737341 -21930664 - L1ME3A LINE L1 -5 6165 5532 534 265 80 12 chr20 44737625 44737787 -21930218 + MER104 DNA MER2_type 4 176 -4 432 280 101 16 chr20 44738010 44738199 -21929806 - MIR SINE MIR -12 250 46 287 260 80 73 chr20 44738472 44738622 -21929383 - L2 LINE L2 -2 3311 3161 252 336 98 28 chr20 44738622 44738765 -21929240 - L2 LINE L2 -2 3270 3118 452 257 62 50 chr20 44739477 44739656 -21928349 + MIR SINE MIR 18 198 -64 645 199 68 78 chr20 44739665 44739744 -21928261 - MLT1I LTR MaLR -19 390 312 1827 135 7 43 chr20 44739744 44740047 -21927958 - AluSx SINE Alu -20 292 1 645 199 68 78 chr20 44740047 44740158 -21927847 - MLT1I LTR MaLR -97 312 202 327 272 26 44 chr20 44740514 44740628 -21927377 - MIR SINE MIR -86 176 65 2169 178 42 59 chr20 44740628 44740810 -21927195 + L1MB7 LINE L1 5652 5836 -348 2187 113 6 3 chr20 44740810 44741121 -21926884 + AluSx SINE Alu 1 312 0 2169 178 42 59 chr20 44741121 44741467 -21926538 + L1MB7 LINE L1 5836 6171 -13 222 293 0 49 chr20 44742164 44742246 -21925759 - L3b LINE CR1 -227 1356 1279 563 239 161 0 chr20 44742364 44742519 -21925486 - MER5A DNA MER1_type -6 183 4 1566 140 93 14 chr20 44742691 44742970 -21925035 - AluJb SINE Alu -1 311 11 478 272 52 7 chr20 44743062 44743198 -21924807 + MIR3 SINE MIR 19 160 -48 474 302 19 25 chr20 44743200 44743359 -21924646 + MER117 DNA MER1_type 3 160 -37 348 281 96 15 chr20 44743932 44744067 -21923938 - L2 LINE L2 -1 3271 3126 226 371 60 0 chr20 44744134 44744250 -21923755 + L2 LINE L2 3145 3267 -5 219 69 0 0 chr20 44744317 44744346 -21923659 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 383 296 6 51 chr20 44744352 44744528 -21923477 - L2 LINE L2 -17 3296 3129 * 436 224 119 10 chr20 44744522 44744701 -21923304 - L2 LINE L2 -264 3008 2819 182 171 24 0 chr20 44744768 44744809 -21923196 + (ATG)n Simple_repeat Simple_repeat 2 43 0 596 302 123 1 chr20 44744809 44745044 -21922961 - MIR SINE MIR 0 262 3 602 249 30 12 chr20 44745404 44745590 -21922415 - MIR SINE MIR -64 144 6 205 158 0 0 chr20 44745623 44745661 -21922344 - MIR SINE MIR -90 118 81 925 180 79 0 chr20 44745675 44745853 -21922152 - MER3 DNA MER1_type -17 192 1 1473 181 43 4 chr20 44745964 44746240 -21921765 + AluJo SINE Alu 5 291 -21 225 288 38 0 chr20 44746324 44746404 -21921601 + L2 LINE L2 3231 3313 0 423 271 34 8 chr20 44746499 44746617 -21921388 - MIR SINE MIR -76 186 66 1888 86 4 0 chr20 44746759 44747015 -21920990 - AluY SINE Alu -4 307 51 1397 195 17 30 chr20 44747030 44747332 -21920673 - AluJo SINE Alu -14 298 1 222 314 105 40 chr20 44747362 44747486 -21920519 + L3 LINE CR1 1371 1502 -75 312 307 61 0 chr20 44747524 44747681 -21920324 - MER5A DNA MER1_type 0 189 4 313 349 135 12 chr20 44747872 44748124 -21919881 + L2 LINE L2 2976 3258 -14 332 368 37 16 chr20 44748539 44748781 -21919224 + L1ME4a LINE L1 5843 6089 -32 675 288 92 0 chr20 44748829 44749013 -21918992 + MIR SINE MIR 61 261 -1 211 303 146 0 chr20 44749580 44749669 -21918336 + L2 LINE L2 3170 3271 -1 499 283 78 26 chr20 44749705 44749765 -21918240 + MIR SINE MIR 13 68 -194 2211 105 3 0 chr20 44749765 44750061 -21917944 - AluSp SINE Alu -16 297 1 499 283 78 26 chr20 44750061 44750243 -21917762 + MIR SINE MIR 68 261 -1 349 317 122 0 chr20 44750357 44750480 -21917525 + MER91A DNA MER1_type 24 161 -35 222 340 0 0 chr20 44750532 44750579 -21917426 + MER91A DNA MER1_type 130 176 -14 892 216 110 16 chr20 44750668 44750922 -21917083 - MER115 DNA AcHobo -1 692 415 485 303 164 14 chr20 44750963 44751250 -21916755 - MER115 DNA AcHobo -358 335 6 1857 168 3 3 chr20 44751257 44751549 -21916456 + AluJo SINE Alu 1 292 -20 25 0 0 0 chr20 44751911 44751936 -21916069 + AT_rich Low_complexity Low_complexity 1 25 0 405 219 115 0 chr20 44752595 44752691 -21915314 - MIR SINE MIR 0 262 156 645 233 48 63 chr20 44752710 44752823 -21915182 + MIR SINE MIR 31 141 -121 2327 83 10 0 chr20 44752823 44753113 -21914892 + AluY SINE Alu 1 293 -18 645 233 48 63 chr20 44753113 44753188 -21914817 + MIR SINE MIR 141 216 -46 297 289 21 0 chr20 44753346 44753443 -21914562 - L1ME4a LINE L1 -25 6096 5998 259 246 31 0 chr20 44753862 44753927 -21914078 + GA-rich Low_complexity Low_complexity 1 67 0 284 251 87 77 chr20 44753988 44754171 -21913834 - L2 LINE L2 -88 3184 3000 929 228 108 66 chr20 44754446 44754644 -21913361 + LTR16C LTR ERVL 64 283 -208 1218 203 9 0 chr20 44754644 44754866 -21913139 + MER58A DNA MER1_type 1 224 0 929 228 108 66 chr20 44754866 44755000 -21913005 + LTR16C LTR ERVL 283 410 -81 384 279 66 16 chr20 44755353 44755475 -21912530 - MIR SINE MIR -57 151 24 438 265 72 36 chr20 44755739 44755905 -21912100 + MIR SINE MIR 1 172 -90 923 256 131 16 chr20 44755996 44756378 -21911627 + LTR16A1 LTR ERVL 4 429 -28 2266 118 0 0 chr20 44756490 44756786 -21911219 + AluSx SINE Alu 1 296 -16 840 219 93 32 chr20 44757355 44757601 -21910404 - MIR SINE MIR 0 262 2 181 300 0 20 chr20 44757633 44757683 -21910322 + L2 LINE L2 3250 3298 -15 199 234 39 104 chr20 44758159 44758236 -21909769 - MIR3 SINE MIR -27 181 110 305 277 181 17 chr20 44758486 44758663 -21909342 - MIR SINE MIR -46 216 11 774 178 50 56 chr20 44759405 44759585 -21908420 + MER5A DNA MER1_type 1 179 -10 696 311 14 18 chr20 44759720 44759939 -21908066 - MIR SINE MIR -25 237 20 217 340 132 0 chr20 44760132 44760238 -21907767 + MIR3 SINE MIR 15 134 -74 1214 245 128 30 chr20 44760267 44760728 -21907277 + L2 LINE L2 2808 3313 0 505 272 70 25 chr20 44760712 44760870 -21907135 + MIR3 SINE MIR 16 180 -28 * 312 242 154 74 chr20 44761507 44761718 -21906287 + MIR SINE MIR 18 245 -17 235 237 221 61 chr20 44761712 44761843 -21906162 - MIR SINE MIR -65 197 46 * 1748 163 3 24 chr20 44762487 44762803 -21905202 + AluJb SINE Alu 1 310 0 246 250 0 0 chr20 44764121 44764173 -21903832 - MIR SINE MIR -1 261 210 819 282 37 29 chr20 44764190 44764435 -21903570 + MIR SINE MIR 6 252 -10 202 241 17 35 chr20 44764435 44764493 -21903512 - MIR SINE MIR -89 173 117 233 318 30 0 chr20 44765468 44765534 -21902471 + MIR SINE MIR 28 95 -113 225 163 0 0 chr20 44765535 44765578 -21902427 - LTR66 LTR ERVL -175 435 393 213 108 0 0 chr20 44765595 44765632 -21902373 + (CA)n Simple_repeat Simple_repeat 1 37 0 213 191 44 88 chr20 44765632 44765689 -21902316 + MIR3 SINE MIR 125 180 -28 216 181 125 42 chr20 44766029 44766101 -21901904 + MIR SINE MIR 79 156 -106 466 267 75 0 chr20 44766590 44766710 -21901295 - MIR SINE MIR -62 146 18 22 0 0 0 chr20 44767741 44767763 -21900242 + GC_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr20 44767764 44767791 -21900214 + (CGG)n Simple_repeat Simple_repeat 1 27 0 45 69 0 0 chr20 44767833 44767920 -21900085 + GC_rich Low_complexity Low_complexity 1 87 0 345 47 0 0 chr20 44767962 44768005 -21900000 + (CGG)n Simple_repeat Simple_repeat 2 44 0 209 337 11 6 chr20 44768401 44768576 -21899429 + (CA)n Simple_repeat Simple_repeat 1 176 0 270 323 60 8 chr20 44769228 44769361 -21898644 + MIR SINE MIR 41 180 -82 2046 207 79 20 chr20 44769382 44769986 -21898019 - MLT1E2 LTR MaLR -1 625 1 699 231 50 0 chr20 44770104 44770264 -21897741 + L2 LINE L2 2391 2558 -756 744 258 108 15 chr20 44770274 44770607 -21897398 + L2 LINE L2 2751 3166 -147 213 255 0 0 chr20 44770613 44770660 -21897345 + (TA)n Simple_repeat Simple_repeat 2 48 0 233 296 0 23 chr20 44770663 44770751 -21897254 + L1MC4 LINE L1 6617 6702 -1340 302 250 0 0 chr20 44770802 44770870 -21897135 + L2 LINE L2 3246 3313 0 * 336 215 69 85 chr20 44770859 44770989 -21897016 - MIR SINE MIR -65 197 70 2401 86 3 3 chr20 44771015 44771318 -21896687 + AluSq SINE Alu 1 303 -10 246 281 0 16 chr20 44771325 44771389 -21896616 - L2 LINE L2 -195 3077 3015 247 282 197 69 chr20 44771764 44771855 -21896150 + MIR SINE MIR 38 116 -146 2197 136 0 3 chr20 44771855 44772164 -21895841 + AluSx SINE Alu 1 308 -4 247 282 197 69 chr20 44772164 44772260 -21895745 + MIR SINE MIR 116 249 -13 353 325 49 16 chr20 44772262 44772385 -21895620 - L2 LINE L2 -19 3294 3168 26 0 0 0 chr20 44772391 44772417 -21895588 + AT_rich Low_complexity Low_complexity 1 26 0 279 0 0 0 chr20 44772496 44772527 -21895478 + (TG)n Simple_repeat Simple_repeat 2 32 0 733 164 0 9 chr20 44772543 44772659 -21895346 - FLAM_C SINE Alu -27 116 2 2182 122 0 3 chr20 44772915 44773219 -21894786 + AluSx SINE Alu 1 303 -9 285 98 0 0 chr20 44773829 44773870 -21894135 + (TG)n Simple_repeat Simple_repeat 2 42 0 291 130 0 0 chr20 44774551 44774605 -21893400 + (TCCC)n Simple_repeat Simple_repeat 3 56 0 537 241 96 48 chr20 44774614 44774801 -21893204 + MIR SINE MIR 67 262 0 428 232 30 24 chr20 44775427 44775591 -21892414 + (CAGAGA)n Simple_repeat Simple_repeat 2 166 0 256 237 0 0 chr20 44775701 44775760 -21892245 + (CA)n Simple_repeat Simple_repeat 2 60 0 308 274 111 40 chr20 44775784 44775981 -21892024 + MIR3 SINE MIR 1 216 -46 2280 110 3 0 chr20 44776160 44776468 -21891537 - AluSc SINE Alu 0 309 1 983 254 91 65 chr20 44776505 44777152 -21890853 + L1MC4a LINE L1 5261 5924 -1884 507 275 41 41 chr20 44777769 44777940 -21890065 + MIR3 SINE MIR 18 188 -20 691 277 80 5 chr20 44777948 44778161 -21889844 + MIR SINE MIR 33 261 -1 2048 123 7 0 chr20 44778342 44778619 -21889386 + AluSx SINE Alu 4 282 -30 198 0 0 0 chr20 44778621 44778643 -21889362 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 2016 139 13 16 chr20 44779130 44779439 -21888566 - AluSx SINE Alu -4 308 1 2269 123 0 0 chr20 44779859 44780159 -21887846 - AluSx SINE Alu -12 300 1 954 285 76 45 chr20 44780202 44780306 -21887699 - L2 LINE L2 -38 3275 3176 1011 46 61 0 chr20 44780306 44780437 -21887568 - MER85 DNA T2_type 0 139 1 954 285 76 45 chr20 44780437 44780777 -21887228 - L2 LINE L2 -137 3176 2817 1994 157 13 0 chr20 44780820 44781125 -21886880 - AluJb SINE Alu -3 309 1 732 243 55 52 chr20 44781127 44781456 -21886549 + MER113 DNA MER1_type? 41 370 -151 455 236 36 9 chr20 44781509 44781619 -21886386 + MER81 DNA DNA 2 114 0 1821 241 68 43 chr20 44781693 44782271 -21885734 + MLT1E LTR MaLR 1 592 -1 2074 108 32 123 chr20 44782305 44782380 -21885625 - THE1B LTR MaLR 0 364 284 2025 135 7 10 chr20 44782380 44782669 -21885336 - AluSx SINE Alu -24 288 1 2074 108 32 123 chr20 44782669 44782993 -21885012 - THE1B LTR MaLR -80 284 1 285 191 53 38 chr20 44783545 44783676 -21884329 - L1ME4a LINE L1 -11 6110 5978 461 306 117 28 chr20 44783709 44784068 -21883937 - L1ME4a LINE L1 -206 5915 5525 771 120 43 0 chr20 44784176 44784293 -21883712 - AluSp/q SINE Alu -8 305 184 575 284 142 0 chr20 44784507 44784725 -21883280 + MER112 DNA MER1_type 1 249 -11 407 266 133 46 chr20 44784764 44785315 -21882690 - L1P4 LINE L1 -585 5581 4975 212 139 47 0 chr20 44785805 44785848 -21882157 + (TTTG)n Simple_repeat Simple_repeat 1 45 0 874 76 84 8 chr20 44785848 44785967 -21882038 - AluSq/x SINE Alu -179 133 6 1706 164 0 48 chr20 44785974 44786286 -21881719 - AluJo SINE Alu -15 297 1 1274 157 74 0 chr20 44786543 44786754 -21881251 - Tigger2 DNA MER2_type -1 2717 2484 1901 164 0 16 chr20 44786754 44787071 -21880934 + AluJb SINE Alu 1 312 0 1274 157 74 0 chr20 44787071 44787101 -21880904 - Tigger2 DNA MER2_type -234 2484 2458 4066 141 21 51 chr20 44787157 44787549 -21880456 - Tigger2 DNA MER2_type -1972 746 387 795 209 85 0 chr20 44787549 44787702 -21880303 - FAM SINE Alu -9 166 1 4066 141 21 51 chr20 44787702 44788075 -21879930 - Tigger2 DNA MER2_type -2331 387 4 361 238 137 71 chr20 44788530 44788698 -21879307 + L1ME4a LINE L1 5295 5473 -2335 686 120 0 8 chr20 44788707 44788824 -21879181 + (TTCC)n Simple_repeat Simple_repeat 1 116 0 972 259 71 41 chr20 44788832 44789020 -21878985 + L1ME4a LINE L1 5496 5677 -444 640 269 59 35 chr20 44789020 44789276 -21878729 - MIR SINE MIR 0 262 1 972 259 71 41 chr20 44789276 44789523 -21878482 + L1ME4a LINE L1 5677 5944 -177 207 0 0 0 chr20 44789743 44789766 -21878239 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 930 123 0 36 chr20 44789858 44789996 -21878009 - FLAM_A SINE Alu 0 133 1 311 286 80 70 chr20 44790670 44790869 -21877136 + HAL1b LINE L1 611 811 -537 395 269 128 44 chr20 44790876 44791125 -21876880 + MLT1J LTR MaLR 30 299 -212 2345 103 0 3 chr20 44791282 44791583 -21876422 - AluSq SINE Alu -12 301 2 786 230 170 25 chr20 44791610 44792015 -21875990 + HAL1b LINE L1 792 1255 -93 2306 199 17 30 chr20 44792032 44792569 -21875436 - L1MD3 LINE L1 -8 7987 7458 226 186 0 0 chr20 44792571 44792630 -21875375 + HAL1b LINE L1 1275 1333 -15 440 278 153 0 chr20 44793007 44793151 -21874854 - MIR SINE MIR -21 241 76 264 239 30 0 chr20 44793550 44793617 -21874388 + GA-rich Low_complexity Low_complexity 2 70 0 239 216 0 0 chr20 44793701 44793752 -21874253 + MLT1K LTR MaLR 519 569 -19 405 220 102 34 chr20 44794682 44794800 -21873205 - L2 LINE L2 0 3313 3188 346 273 116 33 chr20 44794828 44794949 -21873056 - MIR SINE MIR -126 136 6 232 311 29 10 chr20 44795194 44795297 -21872708 + LTR67 LTR ERVL 436 540 -17 835 237 74 96 chr20 44795851 44796299 -21871706 - MLT1J LTR MaLR -73 438 1 2306 114 0 0 chr20 44796506 44796804 -21871201 - AluSx SINE Alu -14 298 1 340 270 281 6 chr20 44796873 44797051 -21870954 + MIR SINE MIR 36 262 0 * 480 251 15 36 chr20 44797038 44797177 -21870828 - MIR SINE MIR -57 151 29 1812 160 118 108 chr20 44797480 44797552 -21870453 - MLT1D LTR MaLR 0 505 435 1906 146 22 32 chr20 44797552 44797867 -21870138 - AluJo SINE Alu 0 312 1 1812 160 118 108 chr20 44797867 44798294 -21869711 - MLT1D LTR MaLR -70 435 1 2948 104 114 10 chr20 44798360 44798858 -21869147 + LTR43 LTR ERV1 1 550 -52 1238 43 0 106 chr20 44798865 44799010 -21868995 - MER75B DNA T2_type -269 235 117 2108 138 3 10 chr20 44799010 44799322 -21868683 - AluSx SINE Alu 0 312 3 1238 43 0 106 chr20 44799322 44799383 -21868622 - MER75B DNA T2_type -387 117 51 809 109 82 3 chr20 44800009 44800197 -21867808 - MER75 DNA T2_type -250 264 1 1923 113 89 0 chr20 44800205 44800487 -21867518 - AluSx SINE Alu -5 307 1 362 107 0 0 chr20 44800489 44800545 -21867460 + LTR43 LTR ERV1 547 602 0 413 273 31 55 chr20 44800546 44800581 -21867424 - MIR SINE MIR -105 157 123 1301 154 173 110 chr20 44800581 44800933 -21867072 - MLT1D LTR MaLR -2 503 112 1725 163 27 17 chr20 44800933 44801234 -21866771 - AluJb SINE Alu -7 305 2 1301 154 173 110 chr20 44801234 44801354 -21866651 - MLT1D LTR MaLR -393 112 1 413 273 31 55 chr20 44801354 44801446 -21866559 - MIR SINE MIR -139 123 33 * 448 262 26 109 chr20 44801442 44801671 -21866334 - MIR SINE MIR -8 254 45 1898 167 6 6 chr20 44801685 44801996 -21866009 + AluJb SINE Alu 1 311 -1 201 39 0 0 chr20 44802012 44802038 -21865967 + (GA)n Simple_repeat Simple_repeat 2 27 0 2042 133 10 0 chr20 44802109 44802418 -21865587 + AluSp SINE Alu 1 312 -1 604 228 221 14 chr20 44802456 44802732 -21865273 + L2 LINE L2 2966 3298 -15 1859 152 0 13 chr20 44802937 44803239 -21864766 + AluJb SINE Alu 1 298 -14 526 267 0 8 chr20 44803245 44803376 -21864629 - MER5B DNA MER1_type -38 140 11 358 230 14 0 chr20 44803438 44803512 -21864493 - MER5B DNA MER1_type -41 137 63 692 213 51 14 chr20 44803513 44803722 -21864283 - L1M4c LINE L1 -5273 1007 853 2483 58 0 42 chr20 44803722 44804035 -21863970 - AluY SINE Alu -11 300 1 5365 100 42 7 chr20 44804048 44804819 -21863186 + HSMAR2 DNA Mariner 502 1299 -3 304 248 225 0 chr20 44804859 44804988 -21863017 + HAL1b LINE L1 1191 1348 0 189 0 0 0 chr20 44805107 44805128 -21862877 + (TAA)n Simple_repeat Simple_repeat 2 22 0 1693 233 60 2 chr20 44805237 44805683 -21862322 - Charlie4a DNA MER1_type -5 503 32 678 270 118 19 chr20 44805819 44806030 -21861975 - HAL1 LINE L1 -1653 854 623 1082 147 35 0 chr20 44806061 44806231 -21861774 - AluJb SINE Alu -4 308 133 380 274 19 0 chr20 44806349 44806455 -21861550 - HAL1 LINE L1 -1932 575 468 824 147 53 142 chr20 44806469 44806543 -21861462 - MER3 DNA MER1_type -4 205 126 1979 114 0 8 chr20 44806543 44806828 -21861177 + AluSx SINE Alu 22 304 0 824 147 53 142 chr20 44806828 44806976 -21861029 - MER3 DNA MER1_type -83 126 1 737 238 175 0 chr20 44806986 44807175 -21860830 - MER58A DNA MER1_type -2 222 1 237 180 40 0 chr20 44807186 44807236 -21860769 - HAL1 LINE L1 -2407 100 49 328 344 23 0 chr20 44807301 44807432 -21860573 + L2 LINE L2 3139 3272 0 602 222 42 48 chr20 44807919 44808108 -21859897 + L1ME3 LINE L1 5969 6156 -6 4635 138 9 19 chr20 44808127 44808911 -21859094 + L1MB3 LINE L1 5406 6181 -2 23 0 0 0 chr20 44808916 44808939 -21859066 + AT_rich Low_complexity Low_complexity 1 23 0 729 187 17 152 chr20 44809500 44809572 -21858433 - MIR SINE MIR -5 257 177 2154 128 0 10 chr20 44809572 44809878 -21858127 + AluSx SINE Alu 1 303 -9 729 187 17 152 chr20 44809878 44810094 -21857911 - MIR SINE MIR -85 177 8 1149 166 33 173 chr20 44810141 44810306 -21857699 - MLT1A2 LTR MaLR -6 368 298 2042 149 0 0 chr20 44810306 44810601 -21857404 - AluSx SINE Alu -17 295 1 1149 166 33 173 chr20 44810601 44810863 -21857142 - MLT1A2 LTR MaLR -76 298 1 1739 276 117 21 chr20 44811100 44811810 -21856195 + L1MEc LINE L1 34 811 -5585 1183 200 47 94 chr20 44811814 44812174 -21855831 + MLT1A1 LTR MaLR 23 365 0 2137 114 3 7 chr20 44812185 44812475 -21855530 + AluSx SINE Alu 1 289 -23 1567 258 29 20 chr20 44812532 44813122 -21854883 + L1MEc LINE L1 866 1460 -4936 2809 3 0 3 chr20 44813127 44813426 -21854579 + AluYa5 SINE Alu 14 311 0 540 193 14 48 chr20 44813449 44813594 -21854411 + L1ME1 LINE L1 6022 6161 -5 202 274 0 20 chr20 44813616 44813667 -21854338 + GA-rich Low_complexity Low_complexity 4 53 0 336 209 76 19 chr20 44813935 44814040 -21853965 - MIR SINE MIR 0 262 152 1148 166 0 0 chr20 44814040 44814221 -21853784 + LTR45B LTR ERV1 3 183 -306 344 180 0 16 chr20 44814219 44814280 -21853725 + AluJo SINE Alu 68 127 -175 * 1110 77 12 6 chr20 44814284 44814452 -21853553 + (GAA)n Simple_repeat Simple_repeat 1 169 0 180 200 0 0 chr20 44814452 44814492 -21853513 + G-rich Low_complexity Low_complexity 4 43 0 1360 188 24 21 chr20 44814506 44814794 -21853211 + LTR45B LTR ERV1 200 488 -1 441 264 0 8 chr20 44814795 44814916 -21853089 - MIR SINE MIR -110 152 33 534 249 32 43 chr20 44815311 44815496 -21852509 + L1ME3A LINE L1 5902 6084 -86 2489 69 7 0 chr20 44815514 44815818 -21852187 + AluSp SINE Alu 1 306 -7 1173 135 0 0 chr20 44815820 44815983 -21852022 + AluJo SINE Alu 131 293 -19 665 244 42 23 chr20 44816062 44816279 -21851726 + HAL1 LINE L1 1433 1653 -854 721 280 87 40 chr20 44816418 44816604 -21851401 - MLT1I LTR MaLR -13 396 220 321 26 0 0 chr20 44816604 44816642 -21851363 + (TG)n Simple_repeat Simple_repeat 1 38 0 721 280 87 40 chr20 44816642 44816801 -21851204 - MLT1I LTR MaLR -189 220 35 2173 99 0 3 chr20 44816949 44817264 -21850741 - AluSx SINE Alu 0 314 1 2046 140 82 20 chr20 44817449 44817468 -21850537 - MLT1A1 LTR MaLR -2 363 347 1943 171 89 20 chr20 44817468 44817872 -21850133 + MSTB1 LTR MaLR 1 432 0 2046 140 82 20 chr20 44817872 44818194 -21849811 - MLT1A1 LTR MaLR -18 347 1 1900 112 48 0 chr20 44818275 44818567 -21849438 - AluSg SINE Alu 0 305 1 2176 121 3 0 chr20 44818619 44818908 -21849097 + AluSx SINE Alu 2 291 -21 313 321 7 29 chr20 44818914 44819051 -21848954 + MIR SINE MIR 100 233 -29 197 274 55 14 chr20 44819191 44819264 -21848741 - MIR SINE MIR -108 100 25 548 252 120 74 chr20 44820031 44820340 -21847665 + Charlie8 DNA MER1_type 45 367 -2050 277 293 0 0 chr20 44820343 44820421 -21847584 + Charlie8 DNA MER1_type 1360 1428 -989 1678 159 16 44 chr20 44820454 44820769 -21847236 + AluJb SINE Alu 1 306 -6 198 220 0 51 chr20 44820791 44820850 -21847155 + L2 LINE L2 3241 3296 -17 534 259 24 49 chr20 44820927 44821132 -21846873 + LTR4 LTR ERV1 1 200 -396 772 238 43 53 chr20 44821306 44821588 -21846417 + LTR4 LTR ERV1 318 596 0 2764 93 3 8 chr20 44821844 44822210 -21845795 - THE1B LTR MaLR 0 364 1 256 110 165 99 chr20 44822279 44822370 -21845635 - MLT1K LTR MaLR -2 586 490 401 297 0 0 chr20 44822389 44822517 -21845488 - MIR SINE MIR -26 236 109 626 58 47 0 chr20 44822937 44823023 -21844982 + MLT2A2 LTR ERVL 364 453 0 263 337 0 0 chr20 44823047 44823133 -21844872 - MIR SINE MIR -124 138 53 250 256 154 0 chr20 44823234 44823351 -21844654 - HAL1b LINE L1 -14 1334 1200 2089 150 0 3 chr20 44823656 44823990 -21844015 + AluSx SINE Alu 1 333 0 2345 106 3 0 chr20 44824865 44825176 -21842829 + AluSx SINE Alu 1 312 0 316 253 63 0 chr20 44825421 44825500 -21842505 - MIR SINE MIR -18 244 161 981 155 107 0 chr20 44825506 44825674 -21842331 + MER6B DNA MER2_type 2 187 -23 203 319 0 78 chr20 44825686 44825802 -21842203 - MIR SINE MIR -75 133 27 349 301 19 0 chr20 44825808 44825911 -21842094 - LTR16A LTR ERVL 0 450 346 331 277 10 10 chr20 44826025 44826126 -21841879 - LTR16A1 LTR ERVL -356 101 1 2176 121 0 13 chr20 44826440 44826754 -21841251 + AluSx SINE Alu 1 310 -2 29 0 0 0 chr20 44826779 44826808 -21841197 + AT_rich Low_complexity Low_complexity 1 29 0 898 266 73 30 chr20 44826936 44827206 -21840799 + MLT1I LTR MaLR 12 320 -89 2043 147 0 3 chr20 44827206 44827512 -21840493 + AluJb SINE Alu 1 305 -7 898 266 73 30 chr20 44827512 44827604 -21840401 + MLT1I LTR MaLR 320 407 -2 2290 85 0 0 chr20 44827822 44828104 -21839901 - AluSx SINE Alu -21 291 10 303 150 12 75 chr20 44828460 44828540 -21839465 + LTR33A LTR ERVL 423 497 -26 622 214 58 66 chr20 44828563 44828820 -21839185 + HAL1 LINE L1 1098 1352 -1155 377 227 65 71 chr20 44828835 44828989 -21839016 + L1MC5 LINE L1 7246 7398 -563 2257 125 0 0 chr20 44828989 44829300 -21838705 + AluSx SINE Alu 1 311 -1 1001 233 4 33 chr20 44829301 44829541 -21838464 + MLT1E2 LTR MaLR 387 619 -7 587 273 5 24 chr20 44829545 44829754 -21838251 + HAL1 LINE L1 1995 2199 -308 1730 139 54 7 chr20 44829760 44830055 -21837950 + AluJb SINE Alu 1 309 -3 2452 71 3 0 chr20 44830308 44830604 -21837401 + AluSp SINE Alu 1 297 -16 245 120 20 40 chr20 44830823 44830873 -21837132 + HAL1 LINE L1 2262 2310 -197 910 112 0 8 chr20 44830885 44831019 -21836986 - AluSp/q SINE Alu -6 307 175 543 212 86 40 chr20 44831051 44831249 -21836756 + HAL1 LINE L1 2301 2507 0 577 167 29 0 chr20 44831355 44831457 -21836548 - MER104 DNA Tc2 -75 105 1 699 144 0 10 chr20 44831474 44831578 -21836427 - FRAM SINE Alu -19 157 55 3656 215 69 40 chr20 44831578 44832109 -21835896 + L1MC2 LINE L1 93 669 -5376 2279 93 0 0 chr20 44832109 44832419 -21835586 + AluSc SINE Alu 1 310 0 3656 215 69 40 chr20 44832419 44832880 -21835125 + L1MC2 LINE L1 669 1115 -4930 1212 75 7 0 chr20 44832880 44833026 -21834979 + AluSq/x SINE Alu 1 147 -165 10127 205 48 45 chr20 44833026 44833220 -21834785 + L1MC2 LINE L1 2751 2943 -3819 2263 78 3 3 chr20 44833220 44833546 -21834459 - AluY SINE Alu 0 326 1 10127 205 48 45 chr20 44833546 44834294 -21833711 + L1MC2 LINE L1 2943 3688 -3074 2321 87 11 0 chr20 44834294 44834581 -21833424 + AluSc SINE Alu 1 290 -19 10127 205 48 45 chr20 44834581 44836306 -21831699 + L1MC2 LINE L1 3688 3392 -3370 1158 147 78 121 chr20 44836306 44836631 -21831374 + LTR56 LTR ERV1 1 302 -143 2337 103 3 0 chr20 44836631 44836932 -21831073 - AluSx SINE Alu -10 302 1 1158 147 78 121 chr20 44836932 44837069 -21830936 + LTR56 LTR ERV1 302 443 -2 10127 205 48 45 chr20 44837069 44837590 -21830415 + L1MC2 LINE L1 3392 3910 -2852 1921 129 11 24 chr20 44837590 44837822 -21830183 - AluSq SINE Alu 0 353 125 200 59 29 0 chr20 44837822 44837856 -21830149 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 1921 129 11 24 chr20 44837856 44837980 -21830025 - AluSq SINE Alu -228 125 1 2406 84 0 0 chr20 44837980 44838277 -21829728 - AluSc SINE Alu -11 298 2 2327 122 0 6 chr20 44838283 44838604 -21829401 - 7SLRNA srpRNA srpRNA -1 319 1 10127 205 48 45 chr20 44838604 44838785 -21829220 + L1MC2 LINE L1 3914 4093 -2669 1664 221 51 20 chr20 44838785 44839234 -21828771 - MLT1C LTR MaLR -2 465 3 10127 205 48 45 chr20 44839234 44839247 -21828758 + L1MC2 LINE L1 4093 4104 -2658 2103 133 10 0 chr20 44839247 44839541 -21828464 + AluSx SINE Alu 1 297 -15 10127 205 48 45 chr20 44839541 44839693 -21828312 + L1MC2 LINE L1 4104 4254 -2508 2053 149 10 3 chr20 44839693 44840002 -21828003 + AluJb SINE Alu 2 312 0 10127 205 48 45 chr20 44840002 44840437 -21827568 + L1MC2 LINE L1 4254 6749 -13 922 129 0 0 chr20 44840437 44840561 -21827444 + FLAM_C SINE Alu 1 124 -19 219 255 31 122 chr20 44840615 44840713 -21827292 + L2 LINE L2 3018 3106 -166 650 270 95 49 chr20 44841182 44841445 -21826560 - MER102b DNA MER1_type 0 341 67 311 331 146 0 chr20 44841743 44841873 -21826132 + L2 LINE L2 3124 3272 0 2042 115 29 0 chr20 44841937 44842216 -21825789 + AluSx SINE Alu 1 287 -25 261 0 0 0 chr20 44842219 44842248 -21825757 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 956 174 0 0 chr20 44842394 44842549 -21825456 - FRAM SINE Alu -11 155 1 358 316 0 35 chr20 44842905 44843079 -21824926 + C-rich Low_complexity Low_complexity 4 171 0 255 221 0 0 chr20 44843187 44843273 -21824732 + (CCG)n Simple_repeat Simple_repeat 2 87 0 21 57 0 0 chr20 44843362 44843397 -21824608 + GC_rich Low_complexity Low_complexity 1 35 0 207 284 69 35 chr20 44845183 44845299 -21822706 + MIR SINE MIR 16 135 -73 762 226 59 32 chr20 44845760 44845981 -21822024 - MIR SINE MIR 0 262 36 345 278 215 0 chr20 44847369 44847513 -21820492 + MIR SINE MIR 20 194 -68 2465 88 0 0 chr20 44847970 44848278 -21819727 - AluSg SINE Alu -2 308 1 184 293 35 60 chr20 44848534 44848594 -21819411 - MIR SINE MIR -54 208 151 1973 96 68 7 chr20 44848594 44848874 -21819131 - AluSx SINE Alu -15 297 1 184 293 35 60 chr20 44848874 44848929 -21819076 - MIR SINE MIR -111 151 96 182 211 0 0 chr20 44849939 44849977 -21818028 + L2 LINE L2 3180 3217 -96 234 206 183 40 chr20 44850887 44851013 -21816992 - L1ME4a LINE L1 -12 6109 5966 2281 96 13 7 chr20 44851164 44851466 -21816539 - AluSq SINE Alu -9 304 1 255 204 280 21 chr20 44852206 44852299 -21815706 - MIR SINE MIR -78 184 68 1726 179 21 0 chr20 44852945 44853236 -21814769 - AluJo SINE Alu -15 297 1 363 203 119 28 chr20 44853593 44853736 -21814269 - Charlie5 DNA MER1_type 0 2624 2469 319 131 82 0 chr20 44853734 44853795 -21814210 - Charlie5 DNA MER1_type -2542 70 5 * 251 327 154 12 chr20 44853795 44853957 -21814048 - L2 LINE L2 -219 3053 2869 290 239 15 0 chr20 44855059 44855126 -21812879 + MER2 DNA MER2_type 3 70 -275 334 224 13 0 chr20 44855139 44855215 -21812790 + MER2 DNA MER2_type 268 344 -1 577 296 28 77 chr20 44855258 44855610 -21812395 - MLT1I LTR MaLR -8 401 67 2265 108 7 0 chr20 44855967 44856274 -21811731 - AluY SINE Alu -1 310 2 2013 132 17 0 chr20 44856304 44856592 -21811413 + AluSx SINE Alu 1 293 -19 2140 138 0 6 chr20 44856665 44856977 -21811028 + AluSx SINE Alu 1 310 -2 1278 183 4 49 chr20 44857516 44857762 -21810243 - AluJo SINE Alu -11 301 67 340 279 25 74 chr20 44857814 44857936 -21810069 - MIR3 SINE MIR -80 128 13 2191 111 0 0 chr20 44858254 44858543 -21809462 - AluSg SINE Alu -21 289 1 181 135 27 27 chr20 44858561 44858598 -21809407 - L2 LINE L2 -12 3301 3265 495 331 23 49 chr20 44858605 44858868 -21809137 + MIR SINE MIR 7 262 0 866 268 20 29 chr20 44860641 44860887 -21807118 - MIR SINE MIR -18 244 1 429 259 105 60 chr20 44860913 44861245 -21806760 - L1ME4a LINE L1 -1 6120 5774 418 280 171 19 chr20 44861935 44862146 -21805859 - MIR SINE MIR 0 262 20 26 0 0 0 chr20 44863123 44863149 -21804856 + AT_rich Low_complexity Low_complexity 1 26 0 210 71 0 0 chr20 44863974 44864002 -21804003 + (A)n Simple_repeat Simple_repeat 1 28 0 1132 157 17 0 chr20 44864766 44864938 -21803067 + FAM SINE Alu 1 175 0 207 69 0 0 chr20 44865626 44865655 -21802350 + (A)n Simple_repeat Simple_repeat 1 29 0 182 256 23 0 chr20 44867172 44867215 -21800790 - MIR SINE MIR -112 150 107 183 212 0 0 chr20 44867900 44867933 -21800072 - MIR SINE MIR -65 143 111 180 0 0 0 chr20 44868051 44868071 -21799934 + (TGGGGG)n Simple_repeat Simple_repeat 6 25 0 401 232 71 0 chr20 44868098 44868197 -21799808 + MIR SINE MIR 79 184 -78 180 303 101 0 chr20 44868194 44868283 -21799722 - MIR SINE MIR -129 133 36 * 232 153 153 0 chr20 44868447 44868506 -21799499 + MIR SINE MIR 82 149 -113 414 0 0 0 chr20 44868605 44868651 -21799354 + (TAAA)n Simple_repeat Simple_repeat 2 47 0 2289 116 0 0 chr20 44868651 44868961 -21799044 + AluSx SINE Alu 1 310 -2 283 227 34 57 chr20 44869583 44869671 -21798334 - MIR SINE MIR -98 164 79 188 268 0 0 chr20 44869653 44869694 -21798311 + MIR SINE MIR 31 71 -191 * 237 235 38 30 chr20 44869811 44869914 -21798091 + MIR SINE MIR 105 207 -55 1433 222 65 60 chr20 44870509 44870883 -21797122 - MLT1H LTR MaLR 0 549 171 1816 115 77 45 chr20 44870883 44871170 -21796835 - AluSg SINE Alu -14 296 1 1433 222 65 60 chr20 44871170 44871241 -21796764 - MLT1H LTR MaLR -378 171 102 375 224 96 40 chr20 44871314 44871439 -21796566 + L2 LINE L2 3172 3303 -10 2609 50 0 7 chr20 44871674 44871976 -21796029 - AluY SINE Alu -10 301 2 191 352 88 6 chr20 44872347 44872506 -21795499 + MIR SINE MIR 86 257 -5 2308 112 0 3 chr20 44872985 44873289 -21794716 + AluSq SINE Alu 1 303 -10 2254 123 0 3 chr20 44873733 44874043 -21793962 - AluSx SINE Alu -3 309 1 218 297 40 0 chr20 44874467 44874541 -21793464 + MIR SINE MIR 77 153 -109 1772 134 0 75 chr20 44874669 44874975 -21793030 - AluJb SINE Alu -29 283 1 202 225 0 0 chr20 44875066 44875106 -21792899 - MIR SINE MIR -111 151 112 22 0 0 0 chr20 44875428 44875450 -21792555 + AT_rich Low_complexity Low_complexity 1 22 0 2152 135 0 13 chr20 44875513 44875824 -21792181 + AluSx SINE Alu 1 307 -5 549 187 20 73 chr20 44875962 44876112 -21791893 - MIR SINE MIR -116 146 5 21 0 0 0 chr20 44876988 44877009 -21790996 + AT_rich Low_complexity Low_complexity 1 21 0 838 226 42 14 chr20 44877040 44877252 -21790753 + AluJo SINE Alu 3 220 -92 2215 177 55 2 chr20 44877465 44877901 -21790104 - L1MC1 LINE L1 -17 6316 5858 2462 97 0 0 chr20 44877927 44878238 -21789767 - AluSx SINE Alu -1 311 1 2157 125 7 3 chr20 44878278 44878583 -21789422 - AluSx SINE Alu -6 306 1 2370 70 7 0 chr20 44878620 44878905 -21789100 - AluSp SINE Alu -14 299 13 228 216 135 27 chr20 44879463 44879574 -21788431 - MER20 DNA MER1_type -90 129 7 2154 114 24 3 chr20 44879708 44880005 -21788000 - AluSg SINE Alu -7 303 1 992 120 8 0 chr20 44880007 44880140 -21787865 - AluSq/x SINE Alu -178 134 1 971 214 44 0 chr20 44880228 44880434 -21787571 + MER20 DNA MER1_type 1 215 -4 846 209 52 51 chr20 44880618 44880810 -21787195 + MIR SINE MIR 3 194 -68 2154 109 3 37 chr20 44880810 44881131 -21786874 + AluSp SINE Alu 1 310 -3 846 209 52 51 chr20 44881131 44881183 -21786822 + MIR SINE MIR 194 244 -18 200 111 0 0 chr20 44881976 44882003 -21786002 - L2 LINE L2 -19 3294 3268 * 331 291 12 22 chr20 44881998 44882117 -21785888 + MIR3 SINE MIR 38 156 -52 186 300 150 17 chr20 44882143 44882263 -21785742 - MIR SINE MIR -13 249 114 275 277 92 46 chr20 44882268 44882398 -21785607 + MER5B DNA MER1_type 4 139 -39 2394 87 7 0 chr20 44882401 44882700 -21785305 + AluY SINE Alu 1 301 -10 311 321 155 37 chr20 44882734 44883030 -21784975 - L2 LINE L2 -1 3271 2941 385 370 42 16 chr20 44883308 44883497 -21784508 + MIR SINE MIR 15 208 -54 2202 113 0 0 chr20 44883702 44883994 -21784011 - AluSg SINE Alu -18 292 1 2251 124 0 0 chr20 44884018 44884316 -21783689 - AluSq SINE Alu -15 298 1 1638 195 3 35 chr20 44884337 44884655 -21783350 - AluJo SINE Alu -4 308 1 240 321 12 0 chr20 44884680 44884761 -21783244 + MIR SINE MIR 175 256 -6 2335 104 0 3 chr20 44884821 44885118 -21782887 - AluSq SINE Alu -17 296 1 383 135 35 156 chr20 44885118 44885172 -21782833 - Charlie4 DNA MER1_type -34 1927 1868 1471 143 147 0 chr20 44885172 44885423 -21782582 - AluJo SINE Alu -24 288 1 383 135 35 156 chr20 44885423 44885509 -21782496 - Charlie4 DNA MER1_type -93 1868 1804 2180 133 0 13 chr20 44885526 44885842 -21782163 - AluSx SINE Alu 0 312 1 526 187 148 33 chr20 44885842 44886024 -21781981 - Charlie4 DNA MER1_type -1735 226 24 1429 163 17 8 chr20 44886124 44886364 -21781641 + AluJb SINE Alu 71 312 0 1716 168 46 20 chr20 44886460 44886764 -21781241 + AluJo SINE Alu 1 312 0 867 124 70 185 chr20 44886766 44886982 -21781023 + L1MD3 LINE L1 7730 7904 -91 2339 108 0 0 chr20 44886982 44887279 -21780726 + AluSx SINE Alu 1 297 -15 867 124 70 185 chr20 44887279 44887360 -21780645 + L1MD3 LINE L1 7904 7993 -2 260 324 135 16 chr20 44887449 44887634 -21780371 + MIR SINE MIR 49 255 -7 457 84 0 75 chr20 44888469 44888576 -21779429 + (TCCC)n Simple_repeat Simple_repeat 4 102 0 242 163 41 0 chr20 44888580 44888629 -21779376 - AluJ/FRAM SINE Alu -25 277 227 255 125 0 0 chr20 44888629 44888669 -21779336 + (TTCC)n Simple_repeat Simple_repeat 2 41 0 1813 159 7 0 chr20 44888669 44888946 -21779059 - AluJo SINE Alu -33 279 1 2150 128 0 3 chr20 44888968 44889265 -21778740 - AluSx SINE Alu -16 296 1 282 212 186 0 chr20 44889978 44890079 -21777926 + MIR SINE MIR 56 175 -33 294 229 25 140 chr20 44890843 44890915 -21777090 + MIR SINE MIR 113 192 -70 2320 110 3 0 chr20 44890915 44891214 -21776791 - AluSp SINE Alu -13 300 1 2464 82 0 3 chr20 44891218 44891521 -21776484 - AluSx SINE Alu -10 302 1 294 229 25 140 chr20 44891521 44891600 -21776405 + MIR SINE MIR 195 251 -11 224 330 40 10 chr20 44891641 44891741 -21776264 - L2 LINE L2 -1 3271 3169 3448 152 38 28 chr20 44891778 44892257 -21775748 - L1MB3 LINE L1 -3 6180 5690 2349 118 0 0 chr20 44892257 44892563 -21775442 + AluSg SINE Alu 1 306 -4 3448 152 38 28 chr20 44892563 44892761 -21775244 - L1MB3 LINE L1 -493 5690 5496 218 93 0 23 chr20 44892761 44892804 -21775201 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 225 0 0 0 chr20 44892832 44892857 -21775148 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1711 149 42 24 chr20 44893446 44893734 -21774271 - AluJo SINE Alu -19 293 1 350 348 25 25 chr20 44894288 44894449 -21773556 + MIR3 SINE MIR 47 207 -1 2259 124 0 0 chr20 44894885 44895184 -21772821 - AluSx SINE Alu -13 299 1 182 266 117 55 chr20 44897226 44897354 -21770651 + L2 LINE L2 1128 1263 -2051 530 298 108 70 chr20 44897369 44897744 -21770261 + L2 LINE L2 2001 2360 -954 2127 116 36 7 chr20 44897744 44898047 -21769958 - AluSx SINE Alu 0 312 1 530 298 108 70 chr20 44898047 44898462 -21769543 + L2 LINE L2 2360 2821 -493 434 280 77 97 chr20 44899250 44899600 -21768405 + L2 LINE L2 2930 3272 0 354 227 200 73 chr20 44901134 44901354 -21766651 - MIR SINE MIR -13 249 2 237 293 52 29 chr20 44901508 44901682 -21766323 + L1MC4 LINE L1 7864 8041 -1 327 281 53 21 chr20 44901819 44901994 -21766011 - L1MC4a LINE L1 -297 5824 5684 951 130 0 0 chr20 44902038 44902169 -21765836 + FLAM_C SINE Alu 1 131 -2 240 342 81 0 chr20 44902467 44902628 -21765377 - L1MC4a LINE L1 -1088 5058 4885 1613 196 105 59 chr20 44902773 44903299 -21764706 + MLT1G LTR MaLR 12 561 -29 246 125 0 0 chr20 44903329 44903369 -21764636 - Alu SINE Alu -4 298 259 2171 109 0 3 chr20 44903333 44903618 -21764387 - AluSx SINE Alu -18 294 11 248 276 111 33 chr20 44903922 44904110 -21763895 + MIR SINE MIR 31 241 -21 263 280 84 42 chr20 44904266 44904480 -21763525 + L1M4 LINE L1 4553 4775 -1371 732 226 148 22 chr20 44904740 44904973 -21763032 + MER46C DNA MER2_type 24 297 -41 2096 114 0 17 chr20 44904973 44905271 -21762734 - AluSx SINE Alu -17 295 3 732 226 148 22 chr20 44905271 44905307 -21762698 + MER46C DNA MER2_type 297 327 -11 217 344 11 11 chr20 44905494 44905584 -21762421 + MIR SINE MIR 52 141 -67 386 316 52 0 chr20 44906615 44906751 -21761254 + MIR SINE MIR 47 189 -73 21 71 0 0 chr20 44907082 44907124 -21760881 + AT_rich Low_complexity Low_complexity 1 42 0 662 229 118 48 chr20 44907334 44907605 -21760400 - L1ME3A LINE L1 -230 5940 5651 243 286 20 20 chr20 44908507 44908605 -21759400 + MLT1K LTR MaLR 131 228 -360 645 274 75 50 chr20 44908681 44909002 -21759003 + MLT1K LTR MaLR 260 588 0 367 262 131 0 chr20 44909048 44909170 -21758835 - MIR SINE MIR -29 233 96 221 239 6 182 chr20 44909957 44910133 -21757872 + L2 LINE L2 2887 3031 -241 243 323 52 10 chr20 44910133 44910229 -21757776 + L2 LINE L2 3214 3313 0 372 292 270 21 chr20 44910413 44911173 -21756832 + L2 LINE L2 1437 2385 -929 253 278 174 59 chr20 44911245 44911845 -21756160 + L2 LINE L2 2590 3264 -8 290 306 50 33 chr20 44912998 44913119 -21754886 + MIR SINE MIR 1 123 -139 192 152 0 0 chr20 44914332 44914365 -21753640 + A-rich Low_complexity Low_complexity 1 33 0 1921 94 72 22 chr20 44914666 44914943 -21753062 - AluSx SINE Alu -21 291 1 1787 186 0 7 chr20 44915116 44915412 -21752593 - AluJo SINE Alu -18 294 1 426 151 0 0 chr20 44915542 44915615 -21752390 + (TA)n Simple_repeat Simple_repeat 2 74 0 206 296 62 12 chr20 44916077 44916158 -21751847 - MIR SINE MIR -78 130 46 181 380 0 13 chr20 44916482 44916561 -21751444 + MIR SINE MIR 37 114 -148 292 266 118 115 chr20 44916860 44917417 -21750588 + L2 LINE L2 2711 3272 0 591 298 137 22 chr20 44918037 44918352 -21749653 - L2 LINE L2 -52 3261 2911 209 189 94 0 chr20 44918337 44918390 -21749615 + L2 LINE L2 3256 3313 0 * 2659 149 30 39 chr20 44918408 44918871 -21749134 - MER65C LTR ERV1 0 461 3 201 351 61 70 chr20 44918947 44919292 -21748713 + L2 LINE L2 2891 3232 -40 180 306 83 28 chr20 44919345 44919417 -21748588 + L2 LINE L2 3115 3190 -82 1031 232 75 59 chr20 44919555 44919687 -21748318 + MLT1L LTR MaLR 115 243 -372 2316 96 7 0 chr20 44919687 44919990 -21748015 + AluY SINE Alu 1 305 -6 1031 232 75 59 chr20 44919990 44920228 -21747777 + MLT1L LTR MaLR 243 491 -124 1805 130 58 11 chr20 44920261 44920538 -21747467 + AluSx SINE Alu 1 290 -22 882 246 130 13 chr20 44920631 44921132 -21746873 + MLT1G1 LTR MaLR 1 593 -2 906 155 113 59 chr20 44921264 44921503 -21746502 - L1MB8 LINE L1 0 6178 5927 766 153 169 0 chr20 44921673 44921797 -21746208 - AluJb SINE Alu -165 147 3 686 242 15 139 chr20 44921816 44922033 -21745972 + MER8 DNA MER2_type 1 179 -60 198 0 0 0 chr20 44922033 44922055 -21745950 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 686 242 15 139 chr20 44922055 44922110 -21745895 + MER8 DNA MER2_type 179 239 0 780 204 93 0 chr20 44922184 44922346 -21745659 - MER3 DNA MER1_type -23 186 10 807 150 8 8 chr20 44922494 44922627 -21745378 + FLAM_C SINE Alu 1 133 -10 340 225 319 24 chr20 44922649 44922818 -21745187 + MIR SINE MIR 34 252 -10 528 256 128 17 chr20 44923146 44923318 -21744687 + MIR SINE MIR 24 214 -48 225 241 184 11 chr20 44923357 44923444 -21744561 + MIR SINE MIR 161 262 0 291 174 29 58 chr20 44925310 44925379 -21742626 - MIR SINE MIR 0 262 196 325 140 0 0 chr20 44925382 44925432 -21742573 + MER116 DNA Mariner 5 54 -26 666 224 38 49 chr20 44925441 44925609 -21742396 - MIR SINE MIR -68 194 27 2258 94 0 0 chr20 44925609 44925906 -21742099 - AluY SINE Alu -14 297 1 666 224 38 49 chr20 44925906 44925920 -21742085 - MIR SINE MIR -235 27 14 1981 168 41 16 chr20 44926330 44926699 -21741306 - MLT1B LTR MaLR 0 390 13 1057 34 0 0 chr20 44927593 44927712 -21740293 + L1PA3 LINE L1 6037 6155 0 276 30 0 0 chr20 44928359 44928392 -21739613 + (TG)n Simple_repeat Simple_repeat 2 34 0 387 0 0 0 chr20 44928552 44928595 -21739410 + (CA)n Simple_repeat Simple_repeat 2 44 0 1892 116 8 4 chr20 44929135 44929402 -21738603 - AluY SINE Alu -5 306 39 529 276 60 51 chr20 44931120 44931337 -21736668 + MIR SINE MIR 41 259 -3 201 74 0 0 chr20 44931536 44931563 -21736442 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 862 143 0 0 chr20 44931563 44931682 -21736323 - FLAM_C SINE Alu -22 121 3 2140 117 3 3 chr20 44931947 44932238 -21735767 - AluSc SINE Alu -18 291 1 564 297 157 16 chr20 44933592 44934153 -21733852 + L1MEd LINE L1 913 1652 -838 661 283 111 28 chr20 44934154 44934623 -21733382 - MLT1L LTR MaLR -10 605 40 289 255 70 82 chr20 44934985 44935150 -21732855 - MIR SINE MIR -64 144 34 391 284 180 11 chr20 44935485 44935668 -21732337 + MIR SINE MIR 48 261 -1 2183 125 0 25 chr20 44936253 44936573 -21731432 - AluSx SINE Alu 0 312 1 289 299 140 9 chr20 44937459 44937566 -21730439 - L2 LINE L2 -12 3260 3140 2390 60 3 13 chr20 44938138 44938437 -21729568 - AluY SINE Alu -15 296 1 523 259 86 64 chr20 44938510 44938627 -21729378 - L1ME4a LINE L1 -223 5898 5785 2131 114 3 3 chr20 44938627 44938924 -21729081 - AluSx SINE Alu -15 297 1 523 259 86 64 chr20 44938924 44939165 -21728840 - L1ME4a LINE L1 -336 5785 5532 1638 142 9 83 chr20 44939579 44939904 -21728101 - AluJo SINE Alu -10 302 2 878 328 61 19 chr20 44940198 44940790 -21727215 - L2 LINE L2 0 3313 2686 1743 143 3 64 chr20 44940790 44941104 -21726901 + AluJo SINE Alu 1 295 -17 878 328 61 19 chr20 44941104 44941158 -21726847 - L2 LINE L2 -627 2686 2636 2252 79 0 35 chr20 44941656 44941971 -21726034 - AluY SINE Alu -7 304 1 1028 196 14 13 chr20 44942008 44942249 -21725756 + MER33 DNA MER1_type 1 230 -88 961 178 6 0 chr20 44942249 44942412 -21725593 - FRAM SINE Alu -10 166 3 486 148 0 0 chr20 44942412 44942493 -21725512 + MER33 DNA MER1_type 282 362 -1 515 261 64 43 chr20 44942613 44942801 -21725204 + MIR SINE MIR 45 236 -26 2026 122 18 0 chr20 44942810 44943112 -21724893 - AluSx SINE Alu 0 307 1 248 265 158 52 chr20 44943189 44943367 -21724638 - MIR SINE MIR -63 145 7 1706 261 155 30 chr20 44943512 44944468 -21723537 - L2 LINE L2 -9 3304 2210 251 293 142 0 chr20 44945110 44945216 -21722789 + L2 LINE L2 1942 2062 -1252 31 0 0 0 chr20 44945437 44945468 -21722537 + AT_rich Low_complexity Low_complexity 1 31 0 1452 108 0 0 chr20 44945702 44945887 -21722118 + AluSx SINE Alu 1 185 -127 492 132 0 0 chr20 44945893 44945961 -21722044 + AluYb8 SINE Alu 231 298 -20 198 103 0 0 chr20 44945963 44945992 -21722013 + (TATG)n Simple_repeat Simple_repeat 2 30 0 291 125 0 0 chr20 44945996 44946052 -21721953 + LTR66 LTR ERVL 394 449 -161 4585 177 48 1 chr20 44946138 44947876 -21720129 - L1MB7 LINE L1 -51 6133 4272 1480 264 136 34 chr20 44947953 44948632 -21719373 - HAL1 LINE L1 -1752 755 8 668 273 28 76 chr20 44948642 44948998 -21719007 - L1ME4a LINE L1 -295 5826 5488 1804 166 3 7 chr20 44949131 44949433 -21718572 - AluJb SINE Alu -11 301 1 25 75 0 0 chr20 44949445 44949498 -21718507 + AT_rich Low_complexity Low_complexity 1 53 0 313 316 40 46 chr20 44949522 44949674 -21718331 - L1ME4a LINE L1 -917 5229 5079 1399 195 72 8 chr20 44949703 44950008 -21717997 - AluJo SINE Alu 0 325 4 992 154 0 0 chr20 44950008 44950144 -21717861 - FRAM SINE Alu -44 132 1 2087 138 6 3 chr20 44950154 44950465 -21717540 - AluSx SINE Alu 0 312 1 227 185 0 19 chr20 44950695 44950749 -21717256 + (TA)n Simple_repeat Simple_repeat 2 54 0 2120 128 3 0 chr20 44951167 44951464 -21716541 + AluSq SINE Alu 2 299 -14 27 62 0 0 chr20 44951602 44951650 -21716355 + AT_rich Low_complexity Low_complexity 1 48 0 221 133 22 22 chr20 44951800 44951845 -21716160 + (TTA)n Simple_repeat Simple_repeat 3 47 0 369 289 116 35 chr20 44951848 44952300 -21715705 - L1MC4a LINE L1 -302 5819 5459 2312 114 0 0 chr20 44952793 44953099 -21714906 + AluSx SINE Alu 1 306 -6 360 290 104 47 chr20 44953355 44953548 -21714457 + Charlie8 DNA MER1_type 172 375 -2042 1658 170 16 33 chr20 44954879 44955185 -21712820 + AluJb SINE Alu 1 301 -11 483 296 128 15 chr20 44955305 44955508 -21712497 - MIR SINE MIR -6 256 31 919 213 62 54 chr20 44955679 44955937 -21712068 + MIR SINE MIR 2 261 -1 715 252 59 24 chr20 44955955 44956209 -21711796 - MER20B DNA MER1_type -5 778 516 2249 104 16 7 chr20 44956258 44956567 -21711438 + AluSx SINE Alu 1 312 0 228 310 40 20 chr20 44957516 44957616 -21710389 - MER20B DNA MER1_type -680 103 2 254 229 33 0 chr20 44957755 44957816 -21710189 - L2 LINE L2 -1 3312 3250 305 232 56 32 chr20 44960086 44960211 -21707794 - L1MC5 LINE L1 -38 7923 7796 1452 174 50 25 chr20 44960489 44960771 -21707234 - AluJo SINE Alu -23 289 1 250 359 23 23 chr20 44960810 44960938 -21707067 + MIR3 SINE MIR 65 192 -16 497 96 52 96 chr20 44961088 44961182 -21706823 + L1MC1 LINE L1 6224 6314 -19 2170 108 3 10 chr20 44961182 44961487 -21706518 - AluSx SINE Alu -9 303 1 497 96 52 96 chr20 44961487 44961507 -21706498 + L1MC1 LINE L1 6314 6333 0 648 77 10 48 chr20 44961520 44961567 -21706438 + HY3 scRNA scRNA 1 48 -53 2195 114 0 3 chr20 44961567 44961866 -21706139 - AluSx SINE Alu -14 298 1 648 77 10 48 chr20 44961866 44961922 -21706083 + HY3 scRNA scRNA 48 100 -1 185 0 40 0 chr20 44961922 44961947 -21706058 + (TAAAAA)n Simple_repeat Simple_repeat 2 27 0 1713 108 22 0 chr20 44961947 44962216 -21705789 - L1P LINE L1 -789 5357 5083 2440 89 0 13 chr20 44962226 44962540 -21705465 - AluSg SINE Alu 0 310 1 2545 55 0 10 chr20 44962833 44963142 -21704863 + AluY SINE Alu 1 306 -5 627 313 85 49 chr20 44963231 44963697 -21704308 - L1MEd LINE L1 -825 1918 1470 252 0 0 0 chr20 44963723 44963751 -21704254 + (TTTA)n Simple_repeat Simple_repeat 3 30 0 636 193 18 0 chr20 44963754 44963868 -21704137 - FLAM_A SINE Alu -17 116 1 390 280 45 32 chr20 44963955 44964112 -21703893 - L1MEd LINE L1 -5334 1038 880 221 0 35 0 chr20 44964507 44964536 -21703469 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 383 258 30 76 chr20 44964630 44964740 -21703265 - MIR SINE MIR -116 146 41 2253 96 13 0 chr20 44964740 44965043 -21702962 + AluSg SINE Alu 1 307 -3 383 258 30 76 chr20 44965043 44965064 -21702941 - MIR SINE MIR -221 41 21 6023 154 41 25 chr20 44965240 44965537 -21702468 - L1PA16 LINE L1 -9 6157 5866 2215 98 7 0 chr20 44965537 44965824 -21702181 - AluSx SINE Alu -23 289 1 6023 154 41 25 chr20 44965824 44967525 -21700480 - L1PA16 LINE L1 -300 5866 4125 2103 108 7 0 chr20 44967528 44967834 -21700171 - AluSg SINE Alu 0 308 1 599 316 66 51 chr20 44967897 44968153 -21699852 - MIR SINE MIR 0 262 3 234 62 0 0 chr20 44968594 44968626 -21699379 + (TTTTTG)n Simple_repeat Simple_repeat 1 32 0 213 39 0 0 chr20 44969174 44969200 -21698805 + (TA)n Simple_repeat Simple_repeat 2 27 0 2243 102 3 3 chr20 44969509 44969803 -21698202 - AluSc SINE Alu -15 294 1 613 266 99 25 chr20 44969807 44970254 -21697751 - L1 LINE L1 -1490 4656 4130 1606 156 45 54 chr20 44970254 44970568 -21697437 - AluJo SINE Alu -1 311 1 613 266 99 25 chr20 44970568 44970765 -21697240 - L1 LINE L1 -2016 4130 3949 352 249 97 71 chr20 44970847 44971228 -21696777 - L1 LINE L1 -3127 3019 2629 23 0 0 0 chr20 44971443 44971466 -21696539 + AT_rich Low_complexity Low_complexity 1 23 0 1998 119 7 4 chr20 44971616 44971918 -21696087 + AluSx SINE Alu 5 307 0 27 73 0 0 chr20 44971969 44972024 -21695981 + AT_rich Low_complexity Low_complexity 1 55 0 408 332 109 5 chr20 44973107 44973342 -21694663 + MIR SINE MIR 3 261 -1 270 95 95 0 chr20 44975505 44975547 -21692458 + MIR SINE MIR 183 228 -34 243 0 0 0 chr20 44975672 44975699 -21692306 + (TTG)n Simple_repeat Simple_repeat 2 28 0 700 101 0 18 chr20 44976056 44976165 -21691840 - L1MB8 LINE L1 -13 6165 6059 1897 150 10 20 chr20 44976195 44976501 -21691504 - AluJo SINE Alu -9 303 1 2153 176 29 5 chr20 44976512 44976933 -21691072 - L1MB7 LINE L1 -19 6165 5735 283 259 12 12 chr20 44977604 44977685 -21690320 + MIR SINE MIR 121 201 -61 306 195 0 0 chr20 44977895 44977972 -21690033 + (TG)n Simple_repeat Simple_repeat 1 77 0 735 250 130 47 chr20 44977990 44978266 -21689739 - MLT1H LTR MaLR 0 549 251 2035 123 3 26 chr20 44978286 44978588 -21689417 - AluJo SINE Alu -17 295 1 203 259 0 37 chr20 44979371 44979425 -21688580 - L3 LINE CR1 -1 1576 1525 269 0 0 0 chr20 44979530 44979567 -21688438 - L1MB4 LINE L1 0 6180 6144 405 173 0 0 chr20 44980538 44980613 -21687392 - AluJ/FRAM SINE Alu -1 301 227 2618 59 0 0 chr20 44981362 44981669 -21686336 - AluY SINE Alu -4 307 1 537 184 151 13 chr20 44981700 44981852 -21686153 - L1ME4a LINE L1 -71 6050 5878 242 330 42 25 chr20 44983323 44983441 -21684564 + MIR SINE MIR 24 143 -65 976 315 137 10 chr20 44983609 44983788 -21684217 - L2 LINE L2 -20 3293 3138 279 0 0 0 chr20 44983788 44983819 -21684186 + (TG)n Simple_repeat Simple_repeat 1 31 0 976 315 137 10 chr20 44983819 44984201 -21683804 - L2 LINE L2 -175 3138 2655 465 259 148 7 chr20 44984244 44984379 -21683626 - MER117 DNA MER1_type 0 197 44 2336 91 3 7 chr20 44984616 44984923 -21683082 + AluSp SINE Alu 1 306 -7 21 0 0 0 chr20 44984957 44984978 -21683027 + AT_rich Low_complexity Low_complexity 1 21 0 5384 143 31 9 chr20 44984985 44985797 -21682208 - L1MA4 LINE L1 -32 6268 5432 1547 208 3 7 chr20 44985797 44986095 -21681910 - AluJo SINE Alu -15 297 1 5384 143 31 9 chr20 44986095 44986226 -21681779 - L1MA4 LINE L1 -868 5432 5305 869 261 49 52 chr20 44986479 44986808 -21681197 + MER102a DNA MER1_type 3 330 0 756 234 35 0 chr20 44987077 44987248 -21680757 + MER5A DNA MER1_type 1 177 -12 2142 112 0 10 chr20 44987577 44987873 -21680132 - AluSg1 SINE Alu -16 293 1 889 119 15 15 chr20 44988384 44988518 -21679487 + FLAM_C SINE Alu 1 134 -9 303 172 125 0 chr20 44988534 44988598 -21679407 - L2 LINE L2 -69 3244 3173 259 265 200 16 chr20 44988672 44988857 -21679148 - L2 LINE L2 -248 3065 2847 489 250 122 85 chr20 44988871 44989089 -21678916 + L1M4 LINE L1 2133 2341 -3805 2265 101 0 10 chr20 44989089 44989395 -21678610 + AluSx SINE Alu 1 303 -9 489 250 122 85 chr20 44989395 44989735 -21678270 + L1M4 LINE L1 2341 2667 -3479 6137 111 2 4 chr20 44989735 44991034 -21676971 - L1PA15 LINE L1 -3 6162 4863 2160 128 0 10 chr20 44991044 44991349 -21676656 - AluSx SINE Alu -10 302 1 489 250 122 85 chr20 44991349 44991663 -21676342 + L1M4 LINE L1 2675 3050 -3096 413 279 101 35 chr20 44991670 44991928 -21676077 + L1M4 LINE L1 3125 3399 -2747 440 284 42 16 chr20 44991957 44992100 -21675905 + L1M4 LINE L1 4651 4802 -1344 1758 171 3 23 chr20 44992100 44992409 -21675596 + AluJo SINE Alu 1 303 -9 440 284 42 16 chr20 44992409 44992455 -21675550 + L1M4 LINE L1 4802 4845 -1301 28 29 0 0 chr20 44992466 44992501 -21675504 + AT_rich Low_complexity Low_complexity 1 35 0 246 231 244 0 chr20 44993341 44993419 -21674586 - MIR SINE MIR 0 262 166 1126 122 20 42 chr20 44993419 44993660 -21674345 + L1MA8 LINE L1 5999 6162 -6 2758 210 59 27 chr20 44993668 44994368 -21673637 + MER44D DNA MER2_type 12 605 0 348 138 0 0 chr20 44994368 44994433 -21673572 + L1MA8 LINE L1 6226 6290 -1 420 252 87 17 chr20 44994435 44994550 -21673455 - MIR SINE MIR -139 123 1 1180 213 77 54 chr20 44995625 44996142 -21671863 - L1MC5 LINE L1 -102 7859 7331 5782 201 81 8 chr20 44996151 44997485 -21670520 - Charlie1a DNA MER1_type -23 1432 1 1977 238 100 72 chr20 44997485 44998771 -21669234 - L1MC5 LINE L1 -624 7337 5952 192 77 0 0 chr20 44998771 44998797 -21669208 + (CATG)n Simple_repeat Simple_repeat 1 26 0 1977 238 100 72 chr20 44998797 44999083 -21668922 - L1MC5 LINE L1 -2009 5952 5676 3133 86 2 11 chr20 45000300 45000742 -21667263 - L1PA11 LINE L1 0 6174 5737 254 32 0 0 chr20 45000742 45000773 -21667232 + L1PA11 LINE L1 5698 5728 -435 563 260 95 35 chr20 45000863 45001070 -21666935 + MIR SINE MIR 12 236 -26 1177 152 92 5 chr20 45001070 45001287 -21666718 + MER46A DNA MER2_type 1 236 0 563 260 95 35 chr20 45001287 45001310 -21666695 + MIR SINE MIR 236 256 -6 1713 165 0 30 chr20 45001842 45002139 -21665866 + AluJo SINE Alu 10 297 -15 304 228 47 71 chr20 45002268 45002395 -21665610 + MIR SINE MIR 78 201 -61 23 68 0 0 chr20 45002506 45002550 -21665455 + AT_rich Low_complexity Low_complexity 1 44 0 191 313 87 43 chr20 45002761 45002876 -21665129 - MIR SINE MIR -64 144 25 2307 106 0 0 chr20 45003264 45003576 -21664429 - AluSx SINE Alu 0 312 1 1702 174 0 30 chr20 45003625 45003930 -21664075 + AluJo SINE Alu 13 308 -4 2437 93 0 10 chr20 45004136 45004449 -21663556 - AluSg SINE Alu 0 310 1 265 269 80 109 chr20 45004596 45004771 -21663234 - MIR SINE MIR 0 262 93 362 219 143 19 chr20 45005283 45005388 -21662617 + MIR SINE MIR 23 140 -68 207 313 78 23 chr20 45005412 45005540 -21662465 + MIR SINE MIR 103 237 -25 339 277 25 0 chr20 45005704 45005823 -21662182 + MIR SINE MIR 136 257 -5 2088 74 89 0 chr20 45005981 45006251 -21661754 - AluSx SINE Alu -18 294 1 202 271 21 0 chr20 45007449 45007497 -21660508 + L3 LINE CR1 1520 1568 -9 470 266 147 6 chr20 45007846 45008023 -21659982 - L1MC/D LINE L1 -2038 5770 5569 344 377 28 5 chr20 45008212 45008427 -21659578 - L1MC/D LINE L1 -985 5161 4942 278 291 205 0 chr20 45009288 45009439 -21658566 + MIR SINE MIR 11 192 -70 490 107 27 0 chr20 45009451 45009526 -21658479 + Tigger4(Zombi) DNA MER2_type 2655 2731 0 213 171 13 145 chr20 45009526 45009602 -21658403 + MIR SINE MIR 194 259 -3 552 258 153 30 chr20 45009661 45009994 -21658011 - L1ME4a LINE L1 -6 6115 5742 224 294 211 18 chr20 45011177 45011286 -21656719 - L3 LINE CR1 -3 1574 1445 1882 138 9 50 chr20 45011752 45012070 -21655935 + AluJo SINE Alu 1 305 -7 412 326 38 38 chr20 45012070 45012309 -21655696 + MIR SINE MIR 24 262 0 281 232 102 104 chr20 45012901 45013187 -21654818 - L1M4 LINE L1 -2816 3330 3044 2253 112 0 13 chr20 45013187 45013500 -21654505 - AluSg SINE Alu -1 309 1 281 232 102 104 chr20 45013500 45013597 -21654408 - L1M4 LINE L1 -3102 3044 2948 1518 197 154 3 chr20 45013609 45013959 -21654046 - L1ME1 LINE L1 -5 6161 5759 383 212 41 11 chr20 45014158 45014276 -21653729 - LTR41 LTR ERVL 0 795 658 315 0 0 0 chr20 45015523 45015558 -21652447 + (CA)n Simple_repeat Simple_repeat 1 35 0 4181 165 16 13 chr20 45016480 45017172 -21650833 - MER44D DNA MER2_type -8 597 32 24 32 0 0 chr20 45017487 45017518 -21650487 + AT_rich Low_complexity Low_complexity 1 31 0 624 290 32 9 chr20 45018010 45018227 -21649778 + MIR SINE MIR 27 248 -14 191 35 0 35 chr20 45018596 45018625 -21649380 + (CAAAA)n Simple_repeat Simple_repeat 5 32 0 1458 181 72 36 chr20 45018751 45019055 -21648950 + MER44D DNA MER2_type 1 315 -390 9073 164 55 53 chr20 45019066 45019333 -21648672 - L1PA15 LINE L1 0 6165 5900 2257 123 0 13 chr20 45019333 45019649 -21648356 - AluSx SINE Alu 0 312 1 9073 164 55 53 chr20 45019649 45020127 -21647878 - L1PA15 LINE L1 -265 5900 5424 2273 48 0 96 chr20 45020127 45020459 -21647546 - AluY SINE Alu -11 300 1 2087 124 10 16 chr20 45020460 45020774 -21647231 - AluJb SINE Alu 0 312 1 9073 164 55 53 chr20 45020774 45021270 -21646735 - L1PA15 LINE L1 -741 5424 4930 2450 53 0 3 chr20 45021270 45021577 -21646428 - AluY SINE Alu 0 306 1 9073 164 55 53 chr20 45021577 45023422 -21644583 - L1PA15 LINE L1 -1235 4930 3068 798 104 44 77 chr20 45023428 45023610 -21644395 + MER44D DNA MER2_type 296 526 -79 297 0 0 0 chr20 45023651 45023684 -21644321 + (CA)n Simple_repeat Simple_repeat 2 34 0 300 158 175 0 chr20 45023716 45023773 -21644232 + MER44D DNA MER2_type 539 605 0 297 293 67 30 chr20 45025565 45025729 -21642276 - MIR SINE MIR -77 185 16 358 173 12 25 chr20 45025937 45026018 -21641987 - MIR SINE MIR -115 147 68 330 327 92 0 chr20 45026148 45026301 -21641704 + MIR SINE MIR 65 231 -31 613 271 186 54 chr20 45027273 45028079 -21639926 - L2 LINE L2 -74 3239 2321 2319 78 7 7 chr20 45028079 45028374 -21639631 + AluSx SINE Alu 7 301 -11 948 129 23 82 chr20 45028374 45028545 -21639460 - THE1B LTR MaLR -203 161 1 1785 171 20 0 chr20 45029227 45029531 -21638474 - AluJo SINE Alu -1 311 2 414 299 60 8 chr20 45029544 45029678 -21638327 - MER5A DNA MER1_type -48 141 1 365 274 49 0 chr20 45029681 45029792 -21638213 - MIR3 SINE MIR -27 181 61 455 251 40 89 chr20 45029867 45030114 -21637891 + L2 LINE L2 3076 3310 -3 195 204 0 0 chr20 45030296 45030340 -21637665 + (TAA)n Simple_repeat Simple_repeat 2 45 0 317 266 64 14 chr20 45030371 45030547 -21637458 - MIR SINE MIR -21 241 59 307 318 75 35 chr20 45031318 45031519 -21636486 - MIR SINE MIR -33 229 21 1007 236 46 0 chr20 45031542 45031779 -21636226 + MIR SINE MIR 15 262 0 188 211 35 18 chr20 45031902 45031959 -21636046 + MIR SINE MIR 204 261 -1 32 43 0 0 chr20 45032994 45033040 -21634965 + AT_rich Low_complexity Low_complexity 1 46 0 648 186 62 25 chr20 45033724 45033885 -21634120 - MIR3 SINE MIR -12 196 30 574 262 131 0 chr20 45034443 45034626 -21633379 - MIR SINE MIR 0 262 56 1948 111 66 7 chr20 45034867 45035156 -21632849 - AluSq SINE Alu -7 306 1 2422 87 0 3 chr20 45035664 45035974 -21632031 - AluSg SINE Alu -1 309 1 195 218 0 0 chr20 45036124 45036179 -21631826 + (TGGA)n Simple_repeat Simple_repeat 2 56 0 597 247 19 0 chr20 45036312 45036474 -21631531 + L1M4 LINE L1 3283 3447 -2699 1320 155 0 40 chr20 45036474 45036700 -21631305 + AluJb SINE Alu 81 297 -15 562 240 0 1 chr20 45036758 45036896 -21631109 - MIR SINE MIR -62 146 19 309 341 79 54 chr20 45037538 45037855 -21630150 - L2 LINE L2 -15 3257 2933 233 277 89 18 chr20 45038360 45038472 -21629533 - MIR SINE MIR -11 251 132 1724 265 46 8 chr20 45038492 45038994 -21629011 + MER20B DNA MER1_type 19 539 -244 498 295 139 17 chr20 45039174 45039411 -21628594 - L2 LINE L2 -351 2963 2698 534 248 28 21 chr20 45039420 45039457 -21628548 + L1ME3A LINE L1 5382 5417 -747 1538 109 140 71 chr20 45039457 45039527 -21628478 - MER2 DNA MER2_type 0 344 280 2035 118 38 0 chr20 45039527 45039814 -21628191 + AluSx SINE Alu 1 298 -14 1538 109 140 71 chr20 45039814 45040065 -21627940 - MER2 DNA MER2_type -64 280 1 534 248 28 21 chr20 45040065 45040172 -21627833 + L1ME3A LINE L1 5417 5527 -637 803 268 61 0 chr20 45040186 45040399 -21627606 + L1ME3A LINE L1 5611 5836 -334 3079 135 39 14 chr20 45040401 45040920 -21627085 - MER89 LTR ERV1 -27 532 1 1115 230 30 39 chr20 45040920 45040974 -21627031 + L1ME3A LINE L1 5833 5886 -284 2563 101 58 12 chr20 45040974 45041389 -21626616 + L1MB3 LINE L1 5748 6181 -2 1115 230 30 39 chr20 45041389 45041665 -21626340 + L1ME3A LINE L1 5886 6160 -10 311 272 165 13 chr20 45042086 45042244 -21625761 - MIR SINE MIR -32 230 49 232 228 35 0 chr20 45042421 45042478 -21625527 + MLT1K LTR MaLR 527 585 -3 237 270 63 0 chr20 45042580 45042643 -21625362 - MIR SINE MIR -168 94 28 301 281 130 69 chr20 45043062 45043251 -21624754 + MIR SINE MIR 8 208 -54 281 320 11 57 chr20 45044129 45044304 -21623701 + MLT1K LTR MaLR 11 177 -411 398 172 11 43 chr20 45044486 45044579 -21623426 + LTR67 LTR ERVL 468 557 0 588 293 38 48 chr20 45045312 45045650 -21622355 + ERVL LTR ERVL 861 1313 -4290 3657 107 10 4 chr20 45045886 45046383 -21621622 + LTR3b LTR ERVK 1 500 0 648 303 43 56 chr20 45046405 45046778 -21621227 + ERVL LTR ERVL 1674 2041 -3723 855 274 90 20 chr20 45046877 45047176 -21620829 + ERVL LTR ERVL 2193 2512 -3252 515 316 56 14 chr20 45047615 45047830 -21620175 + ERVL LTR ERVL 3339 3562 -2202 681 289 39 13 chr20 45047859 45048350 -21619655 + ERVL LTR ERVL 4824 5376 -388 1544 226 110 24 chr20 45049012 45049477 -21618528 + MLT1D LTR MaLR 1 505 0 231 268 0 0 chr20 45049571 45049627 -21618378 + MLT1K LTR MaLR 512 567 -21 371 348 60 39 chr20 45050208 45050490 -21617515 + L2 LINE L2 2933 3220 -52 360 243 39 19 chr20 45051900 45052003 -21616002 + MIR SINE MIR 46 150 -112 315 223 117 9 chr20 45052869 45052981 -21615024 - MIR SINE MIR -72 136 14 1141 151 21 0 chr20 45053374 45053560 -21614445 + MER20 DNA MER1_type 29 218 -1 369 221 0 23 chr20 45053635 45053721 -21614284 - MER5A DNA MER1_type -97 92 9 276 286 43 31 chr20 45054078 45054225 -21613780 + MIR SINE MIR 16 165 -68 284 290 137 16 chr20 45054559 45054683 -21613322 + MIR SINE MIR 118 256 -6 216 299 15 0 chr20 45054890 45054957 -21613048 + MIR SINE MIR 113 180 -82 251 202 155 0 chr20 45056561 45056645 -21611360 + MIR SINE MIR 81 177 -85 945 224 11 0 chr20 45056666 45056849 -21611156 + MER5A DNA MER1_type 5 189 0 423 259 217 5 chr20 45056862 45057051 -21610954 + MIR SINE MIR 21 249 -13 270 242 155 19 chr20 45057072 45057233 -21610772 + MIR SINE MIR 32 214 -48 305 306 58 33 chr20 45057386 45057507 -21610498 + MIR SINE MIR 23 146 -62 366 285 104 42 chr20 45057599 45057792 -21610213 + MIR SINE MIR 47 251 -11 238 333 11 0 chr20 45057857 45057944 -21610061 + MIR SINE MIR 54 141 -67 319 352 57 0 chr20 45057995 45058100 -21609905 - MIR3 SINE MIR -93 115 5 * 338 256 39 23 chr20 45058088 45058217 -21609788 - MIR SINE MIR -11 251 121 400 292 137 0 chr20 45059258 45059419 -21608586 - MIR SINE MIR -1 261 79 239 140 56 149 chr20 45059439 45059478 -21608527 - MER33 DNA MER1_type -2261 324 283 180 0 0 0 chr20 45059478 45059498 -21608507 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 2236 97 7 14 chr20 45059501 45059791 -21608214 - AluSx SINE Alu -24 288 1 239 140 56 149 chr20 45059791 45059854 -21608151 - MER33 DNA MER1_type -2304 281 228 786 206 35 12 chr20 45059854 45060024 -21607981 - Tigger2 DNA MER2_type 0 2718 2545 * 1272 135 10 5 chr20 45060003 45060210 -21607795 - Tigger2 DNA MER2_type -2510 208 1 487 138 92 23 chr20 45060210 45060329 -21607676 - MER33 DNA MER1_type -95 268 141 1690 219 124 63 chr20 45060329 45060884 -21607121 - MLT1E3 LTR MaLR -1 623 1 25 0 0 0 chr20 45060900 45060925 -21607080 + AT_rich Low_complexity Low_complexity 1 25 0 544 188 0 0 chr20 45060949 45061034 -21606971 - MER33 DNA MER1_type -239 85 1 279 230 27 0 chr20 45061071 45061145 -21606860 - MIR3 SINE MIR -15 193 118 480 217 66 25 chr20 45061533 45061571 -21606434 + MIR SINE MIR 21 56 -190 2228 207 123 19 chr20 45061571 45062108 -21605897 + MLT1E LTR MaLR 1 593 0 480 217 66 25 chr20 45062108 45062235 -21605770 + MIR SINE MIR 56 183 -63 368 289 139 6 chr20 45062293 45062466 -21605539 - MLT1J LTR MaLR -2 509 314 225 254 15 30 chr20 45062555 45062622 -21605383 + LTR16C LTR ERVL 108 173 -318 378 308 45 0 chr20 45062669 45062825 -21605180 + LTR16C LTR ERVL 329 491 0 356 248 97 83 chr20 45063055 45063200 -21604805 - L1ME3 LINE L1 -1 6169 6023 379 286 194 20 chr20 45063282 45063530 -21604475 + L2 LINE L2 2980 3270 -2 757 243 31 49 chr20 45064133 45064359 -21603646 + MIR SINE MIR 38 259 -3 286 233 124 31 chr20 45064395 45064524 -21603481 + MIR SINE MIR 51 191 -71 229 245 85 32 chr20 45064612 45064706 -21603299 - MLT1I LTR MaLR -33 376 278 2479 92 0 0 chr20 45064794 45065098 -21602907 + AluSq SINE Alu 1 304 -9 206 258 32 0 chr20 45065318 45065380 -21602625 - MIR SINE MIR -75 133 70 1148 173 70 163 chr20 45065937 45066064 -21601941 - MER113 DNA MER1_type? -43 478 341 2319 74 0 0 chr20 45066064 45066393 -21601612 - AluY SINE Alu 0 329 1 1148 173 70 163 chr20 45066393 45066444 -21601561 - MER113 DNA MER1_type? -180 341 287 2236 119 3 0 chr20 45066444 45066746 -21601259 + AluSq SINE Alu 1 303 -10 1148 173 70 163 chr20 45066746 45067092 -21600913 - MER113 DNA MER1_type? -234 287 1 194 320 141 47 chr20 45068475 45068927 -21599078 + L2 LINE L2 2766 3251 -21 294 321 6 12 chr20 45070106 45070203 -21597802 + (CATA)n Simple_repeat Simple_repeat 1 97 -169 322 237 26 0 chr20 45070203 45070279 -21597726 + MER116 DNA Mariner 3 80 0 294 321 6 12 chr20 45070279 45070374 -21597631 + (CATA)n Simple_repeat Simple_repeat 97 266 0 399 296 0 28 chr20 45070395 45070571 -21597434 + (CATA)n Simple_repeat Simple_repeat 1 171 0 802 189 24 0 chr20 45071094 45071258 -21596747 + LTR57 LTR ERVL 244 411 0 448 220 37 0 chr20 45071295 45071404 -21596601 + LTR57 LTR ERVL 299 411 0 316 227 39 62 chr20 45071434 45071562 -21596443 + MIR SINE MIR 45 169 -93 297 128 0 0 chr20 45072325 45072372 -21595633 + (CA)n Simple_repeat Simple_repeat 1 47 0 303 314 36 29 chr20 45072722 45072859 -21595146 + MIR3 SINE MIR 1 138 -70 358 277 0 4 chr20 45073400 45073530 -21594475 - MIR SINE MIR -56 152 57 256 293 12 0 chr20 45073641 45073723 -21594282 - L3b LINE CR1 -167 1416 1334 327 113 0 0 chr20 45073821 45073874 -21594131 + (TCCC)n Simple_repeat Simple_repeat 3 55 0 888 97 30 21 chr20 45073872 45074163 -21593842 + CT-rich Low_complexity Low_complexity 1 470 0 1579 183 11 7 chr20 45074163 45074442 -21593563 - AluJo SINE Alu -32 280 1 2317 96 3 3 chr20 45074453 45074756 -21593249 - AluSx SINE Alu -4 308 6 21 0 0 0 chr20 45074761 45074782 -21593223 + AT_rich Low_complexity Low_complexity 1 21 0 675 298 13 13 chr20 45074901 45075129 -21592876 - L1ME LINE L1 -334 5787 5560 365 227 68 56 chr20 45075472 45075681 -21592324 - L1M1 LINE L1 -738 5428 5255 384 316 75 35 chr20 45075942 45076276 -21591729 - L1ME LINE L1 -986 5160 4808 2330 117 0 0 chr20 45076276 45076583 -21591422 - AluSg SINE Alu -3 307 1 384 316 75 35 chr20 45076583 45076621 -21591384 - L1ME LINE L1 -1338 4808 4773 331 140 0 0 chr20 45076632 45076682 -21591323 - Tigger1 DNA MER2_type -17 2401 2352 739 106 38 76 chr20 45076687 45076819 -21591186 - AluJo SINE Alu -173 139 13 14265 124 26 35 chr20 45076822 45077122 -21590883 - Tigger1 DNA MER2_type -79 2339 2038 420 143 0 0 chr20 45077122 45077192 -21590813 - L1PA16 LINE L1 -1 6165 6096 14265 124 26 35 chr20 45077192 45077296 -21590709 - Tigger1 DNA MER2_type -380 2038 1935 1723 196 10 0 chr20 45077296 45077592 -21590413 + AluJo SINE Alu 6 304 -8 14265 124 26 35 chr20 45077592 45079523 -21588482 - Tigger1 DNA MER2_type -483 1935 24 855 241 118 71 chr20 45079680 45080301 -21587704 - L1MC5 LINE L1 -20 7941 7292 315 193 12 36 chr20 45080497 45080580 -21587425 - L1MC5 LINE L1 -730 7231 7151 1511 163 27 0 chr20 45080848 45081105 -21586900 - MLT1A1 LTR MaLR 0 365 102 218 295 194 8 chr20 45081342 45081471 -21586534 + MIR3 SINE MIR 36 188 -20 226 231 205 34 chr20 45082193 45082310 -21585695 - MIR3 SINE MIR -66 142 6 356 223 19 48 chr20 45082523 45082626 -21585379 + MIR SINE MIR 74 173 -89 366 23 0 0 chr20 45082686 45082729 -21585276 + (TG)n Simple_repeat Simple_repeat 1 43 0 341 218 39 13 chr20 45082988 45083066 -21584939 + MLT1K LTR MaLR 509 588 0 463 297 83 6 chr20 45083313 45083640 -21584365 - L1MC4 LINE L1 0 8042 7691 4630 148 25 37 chr20 45083970 45084835 -21583170 - L1MB1 LINE L1 -5 7123 6269 247 156 0 0 chr20 45084844 45084889 -21583116 - LTR66 LTR ERVL -172 438 394 235 174 0 0 chr20 45084849 45084895 -21583110 + LTR66 LTR ERVL 394 439 -171 * 466 191 38 9 chr20 45085127 45085232 -21582773 + L1 LINE L1 5193 5300 -846 248 172 0 16 chr20 45085238 45085302 -21582703 + (TA)n Simple_repeat Simple_repeat 2 64 0 1058 211 19 0 chr20 45085436 45085645 -21582360 + MER20 DNA MER1_type 7 219 0 563 203 14 7 chr20 45085844 45085992 -21582013 - L1MB1 LINE L1 -2148 4958 4810 2221 129 3 0 chr20 45086635 45086946 -21581059 + AluSx SINE Alu 1 312 0 1833 134 50 17 chr20 45087149 45087448 -21580557 - AluSx SINE Alu -3 309 1 276 53 0 0 chr20 45087820 45087858 -21580147 + (TG)n Simple_repeat Simple_repeat 2 39 0 464 231 30 85 chr20 45088144 45088343 -21579662 - HAL1 LINE L1 -8 2499 2312 21 89 0 0 chr20 45088372 45088428 -21579577 + AT_rich Low_complexity Low_complexity 1 56 0 2673 145 16 25 chr20 45088428 45088912 -21579093 - L1MB1 LINE L1 -1 6167 5688 493 200 10 10 chr20 45088914 45089014 -21578991 + MER20 DNA MER1_type 120 219 0 206 319 0 29 chr20 45089015 45089084 -21578921 + L2 LINE L2 2579 2645 -669 223 327 6 101 chr20 45089163 45089322 -21578683 + L2 LINE L2 2916 3059 -213 463 292 70 0 chr20 45089416 45089587 -21578418 - L1MC4 LINE L1 -145 7897 7715 4998 156 23 16 chr20 45089590 45091255 -21576750 - L1MA8 LINE L1 -138 6153 4484 3996 235 92 31 chr20 45091278 45091315 -21576690 - L1MB1 LINE L1 -4289 2817 2784 706 213 0 0 chr20 45091315 45091437 -21576568 - FLAM_A SINE Alu -11 122 1 3996 235 92 31 chr20 45091437 45093490 -21574515 - L1MB1 LINE L1 -4322 2784 902 1230 213 19 62 chr20 45093511 45093835 -21574170 + MER74A LTR ERVL 248 557 -1 872 214 0 0 chr20 45094060 45094233 -21573772 - AluSg/x SINE Alu -2 310 138 1225 268 51 33 chr20 45094263 45094715 -21573290 + LTR16B LTR ERVL 2 461 -3 445 261 37 5 chr20 45094828 45095016 -21572989 + Charlie2 DNA MER1_type 2634 2827 -35 208 161 54 71 chr20 45095716 45095772 -21572233 - MIR3 SINE MIR -38 170 116 575 27 14 0 chr20 45097193 45097266 -21570739 + (TCTA)n Simple_repeat Simple_repeat 3 76 0 21608 64 9 3 chr20 45097347 45099995 -21568010 - HERVL-A1 LTR ERVL -2989 2665 1 3163 73 22 36 chr20 45099995 45100445 -21567560 - MLT2A1 LTR ERVL 0 444 1 1263 213 10 16 chr20 45100445 45100755 -21567250 - L1 LINE L1 -1540 6025 5718 * 4811 161 32 5 chr20 45100753 45101544 -21566461 - L1 LINE L1 -6738 827 16 652 218 62 59 chr20 45101583 45101872 -21566133 - L1MC4a LINE L1 -1595 6213 5924 643 237 26 38 chr20 45101879 45102083 -21565922 - L1MC4a LINE L1 -307 5814 5678 25 31 0 0 chr20 45103676 45103708 -21564297 + AT_rich Low_complexity Low_complexity 1 32 0 861 167 60 5 chr20 45103708 45103909 -21564096 - L1MA9 LINE L1 -25 6274 6066 2490 292 42 9 chr20 45103925 45104678 -21563327 + L1M4b LINE L1 74 851 -6008 2356 117 0 0 chr20 45105746 45106055 -21561950 - AluSx SINE Alu -3 309 1 297 354 106 6 chr20 45106253 45106414 -21561591 + MIR3 SINE MIR 16 192 -16 313 300 65 18 chr20 45108315 45108485 -21559520 - LTR16A LTR ERVL -72 378 201 252 0 0 0 chr20 45110467 45110495 -21557510 + (CA)n Simple_repeat Simple_repeat 2 29 0 756 346 9 15 chr20 45110510 45110842 -21557163 + L1M4b LINE L1 924 1253 -5625 1536 262 20 53 chr20 45111802 45112192 -21555813 + L1M1 LINE L1 1860 2261 -5304 2758 109 5 5 chr20 45112192 45112567 -21555438 + THE1C LTR MaLR 1 375 0 11264 109 14 30 chr20 45112567 45114173 -21553832 + THE1C-int LTR MaLR 1 1580 0 2482 95 7 97 chr20 45114173 45114585 -21553420 + THE1C LTR MaLR 1 375 0 1536 262 20 53 chr20 45114585 45114742 -21553263 + L1M1 LINE L1 2258 2391 -5174 5028 228 32 31 chr20 45114783 45115870 -21552135 + L1M4c LINE L1 147 1234 -5419 4473 239 58 40 chr20 45115859 45117798 -21550207 + L1M4b LINE L1 1405 3089 -3868 * 5286 196 38 12 chr20 45117796 45118973 -21549032 + L1 LINE L1 3935 5142 -1004 956 173 92 129 chr20 45118973 45119268 -21548737 - AluJo SINE Alu -20 292 9 3203 226 18 15 chr20 45119285 45120158 -21547847 - L1 LINE L1 -2366 3780 2905 619 228 0 0 chr20 45120154 45120281 -21547724 + L1 LINE L1 4912 5038 -1108 * 234 167 0 0 chr20 45120289 45120325 -21547680 - L1P LINE L1 -3261 2885 2850 205 259 12 62 chr20 45120983 45121064 -21546941 - MIR SINE MIR -84 124 48 2065 218 108 64 chr20 45121232 45121630 -21546375 + L1M4c LINE L1 1413 1792 -4942 230 174 43 0 chr20 45121630 45121676 -21546329 - MER105 DNA DNA -117 87 40 2065 218 108 64 chr20 45121676 45122039 -21545966 + L1M4c LINE L1 1792 2254 -4480 8185 214 15 21 chr20 45122109 45124912 -21543093 + L1PA15 LINE L1 1303 4103 -2694 7715 44 8 0 chr20 45124912 45125957 -21542048 + L1PA5 LINE L1 5104 6146 -8 9395 205 28 6 chr20 45125974 45128637 -21539368 + L1PA15 LINE L1 4118 6813 -3 640 271 98 20 chr20 45128637 45128885 -21539120 + L1MC/D LINE L1 5470 5740 -2068 186 43 0 0 chr20 45128947 45128970 -21539035 + (TC)n Simple_repeat Simple_repeat 1 23 0 733 271 49 86 chr20 45129185 45129617 -21538388 - L1ME3A LINE L1 -234 5936 5521 1947 233 30 58 chr20 45129637 45129771 -21538234 + L1ME3A LINE L1 5263 5399 -771 2130 122 34 0 chr20 45129771 45130066 -21537939 + AluSq SINE Alu 1 305 -8 1947 233 30 58 chr20 45130066 45130655 -21537350 + L1ME3A LINE L1 5399 5966 -204 291 249 84 80 chr20 45131130 45131355 -21536650 - MLT1K LTR MaLR -2 586 361 377 20 20 0 chr20 45131485 45131535 -21536470 + (CA)n Simple_repeat Simple_repeat 1 51 0 184 300 70 50 chr20 45131981 45132081 -21535924 + MIR SINE MIR 21 122 -140 196 328 50 34 chr20 45134816 45134935 -21533070 + MIR3 SINE MIR 4 124 -84 285 290 58 51 chr20 45135309 45135447 -21532558 - MIR SINE MIR -57 205 67 25 0 0 0 chr20 45135692 45135717 -21532288 + AT_rich Low_complexity Low_complexity 1 25 0 302 314 55 55 chr20 45135888 45136108 -21531897 + L1M4 LINE L1 4735 4954 -1192 755 323 49 42 chr20 45136773 45137222 -21530783 - L1M3a LINE L1 -5503 1375 924 1378 91 157 0 chr20 45138624 45138821 -21529184 - MER30 DNA MER1_type 0 230 3 2553 60 0 0 chr20 45138822 45139124 -21528881 + AluY SINE Alu 1 302 -9 324 286 39 45 chr20 45139671 45139825 -21528180 - MIR3 SINE MIR -21 187 35 205 326 33 22 chr20 45140144 45140236 -21527769 - MIR3 SINE MIR -23 185 93 2310 101 3 0 chr20 45140286 45140583 -21527422 + AluSx SINE Alu 1 298 -14 308 206 0 16 chr20 45140822 45140885 -21527120 - Tigger3b DNA MER2_type 0 1232 1171 6111 143 36 40 chr20 45141115 45141720 -21526285 - Tigger3b DNA MER2_type -1861 1167 566 2388 93 0 3 chr20 45141720 45142030 -21525975 + AluY SINE Alu 1 309 -2 6111 143 36 40 chr20 45142030 45142577 -21525428 - Tigger3b DNA MER2_type -2462 566 19 274 281 37 55 chr20 45142693 45142857 -21525148 - L1ME3A LINE L1 -2340 5468 5308 3247 165 79 38 chr20 45143460 45144192 -21523813 - L1MC1 LINE L1 -97 7685 6134 394 306 88 5 chr20 45144490 45144706 -21523299 + L1M4 LINE L1 3081 3314 -2832 334 258 115 66 chr20 45145592 45145774 -21522231 + LTR16A LTR ERVL 258 448 -2 248 374 92 0 chr20 45147630 45147761 -21520244 - MIR3 SINE MIR -16 192 50 350 286 16 68 chr20 45148259 45148451 -21519554 - L1MC/D LINE L1 -2370 5438 5257 2822 287 35 25 chr20 45149032 45149091 -21518914 - L1M3a LINE L1 -6005 854 797 2405 91 0 0 chr20 45149091 45149389 -21518616 - AluSc SINE Alu -11 298 1 2822 287 35 25 chr20 45149389 45150170 -21517835 - L1M3a LINE L1 -6062 797 6 746 213 30 6 chr20 45150191 45150360 -21517645 + L1MA9 LINE L1 6102 6274 -38 242 254 90 0 chr20 45150386 45150453 -21517552 - L1M3a LINE L1 -6770 89 17 213 239 30 15 chr20 45151115 45151182 -21516823 + MIR SINE MIR 57 124 -84 26 30 0 0 chr20 45151194 45151227 -21516778 + AT_rich Low_complexity Low_complexity 1 33 0 1044 266 104 25 chr20 45152052 45152534 -21515471 + L1MC4a LINE L1 5694 6213 -1595 8202 25 0 0 chr20 45152710 45154258 -21513747 - L1PA3 LINE L1 -3 6152 4605 260 276 82 31 chr20 45154386 45154484 -21513521 - MIR3 SINE MIR -19 189 87 4803 117 11 20 chr20 45154817 45155525 -21512480 - L1PA16 LINE L1 -5 6161 5460 2392 246 24 28 chr20 45155527 45156199 -21511806 + L1PBa LINE L1 844 1512 -5351 * 4513 266 45 5 chr20 45156197 45157798 -21510207 - L1M2c LINE L1 -5361 1428 11 3320 216 14 10 chr20 45157806 45158716 -21509289 - L1M3e LINE L1 -2695 4870 3957 1908 212 43 0 chr20 45158718 45159110 -21508895 + MSTB LTR MaLR 1 409 -17 2407 219 51 114 chr20 45159126 45159566 -21508439 - L1 LINE L1 -3606 3959 3493 240 35 0 0 chr20 45159566 45159595 -21508410 + (TTTC)n Simple_repeat Simple_repeat 3 31 0 2407 219 51 114 chr20 45159595 45160262 -21507743 - L1 LINE L1 -4072 3493 2786 2711 159 2 11 chr20 45160262 45160735 -21507270 + L1PA16 LINE L1 5698 6166 0 2407 219 51 114 chr20 45160735 45161010 -21506995 - L1 LINE L1 -4779 2786 2495 246 125 18 0 chr20 45161010 45161066 -21506939 - LTR66 LTR ERVL -171 439 383 2407 219 51 114 chr20 45161066 45161679 -21506326 - L1 LINE L1 -5070 2495 2034 315 198 99 54 chr20 45161700 45161811 -21506194 - L1M3e LINE L1 -5112 2377 2262 1034 307 28 0 chr20 45162076 45162438 -21505567 - L1M3e LINE L1 -6645 844 473 274 351 173 13 chr20 45163675 45164068 -21503937 + L2 LINE L2 1621 2076 -1238 261 322 62 0 chr20 45166531 45166677 -21501328 - Charlie7 DNA MER1_type -2455 157 3 299 370 22 15 chr20 45167868 45168003 -21500002 + MIR3 SINE MIR 20 155 -53 628 164 18 24 chr20 45168049 45168214 -21499791 + GA-rich Low_complexity Low_complexity 2 165 0 648 159 35 0 chr20 45168900 45169045 -21498960 + GA-rich Low_complexity Low_complexity 4 153 0 227 86 0 29 chr20 45169046 45169081 -21498924 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 929 148 12 17 chr20 45169081 45169614 -21498391 + GA-rich Low_complexity Low_complexity 1 529 0 922 238 124 30 chr20 45170211 45170702 -21497303 - L1ME2 LINE L1 0 6662 6126 467 259 38 72 chr20 45170699 45170992 -21497013 - L1ME2 LINE L1 -921 5723 5441 * 845 189 26 5 chr20 45171006 45171196 -21496809 - L1M4 LINE L1 -450 5728 5535 1191 208 113 20 chr20 45171197 45171605 -21496400 - L1ME2 LINE L1 -4902 1640 1195 3881 160 1 18 chr20 45171623 45172473 -21495532 + L1P5 LINE L1 4517 5349 -802 2392 58 0 49 chr20 45172473 45172799 -21495206 + AluY SINE Alu 1 310 -1 3881 160 1 18 chr20 45172799 45173235 -21494770 + L1P5 LINE L1 5349 5791 -360 261 130 13 26 chr20 45173235 45173312 -21494693 + (TA)n Simple_repeat Simple_repeat 1 76 0 285 291 0 0 chr20 45173313 45173399 -21494606 - L1M1 LINE L1 -4519 3047 2962 2170 144 0 24 chr20 45173419 45173795 -21494210 + L1PB1 LINE L1 5782 6148 -3 1234 257 31 44 chr20 45173805 45174210 -21493795 + L1M4 LINE L1 4182 4580 -1566 2165 112 26 3 chr20 45174210 45174515 -21493490 - AluSx SINE Alu 0 312 1 1234 257 31 44 chr20 45174515 45174657 -21493348 + L1M4 LINE L1 4580 4722 -1424 665 104 16 8 chr20 45174662 45174787 -21493218 - L1M2 LINE L1 -4206 3359 3234 1250 198 28 10 chr20 45174788 45175076 -21492929 - L1M1 LINE L1 -7260 305 13 1722 203 13 0 chr20 45175077 45175451 -21492554 - L1M2 LINE L1 -4289 3277 2899 * 2269 329 22 18 chr20 45175448 45176520 -21491485 - L1M2 LINE L1 -5178 2388 1552 2390 60 0 0 chr20 45177361 45177689 -21490316 + AluY SINE Alu 1 328 0 262 42 42 21 chr20 45177731 45177779 -21490226 + (CAAAA)n Simple_repeat Simple_repeat 2 50 0 259 345 162 16 chr20 45178004 45178386 -21489619 + L2 LINE L2 1637 2074 -1240 207 352 38 9 chr20 45178510 45178615 -21489390 + MIR3 SINE MIR 67 174 -34 261 288 68 7 chr20 45181215 45181361 -21486644 - Charlie7 DNA MER1_type -2455 157 3 223 348 52 26 chr20 45182572 45182687 -21485318 + MIR SINE MIR 19 136 -72 282 179 0 36 chr20 45182755 45182839 -21485166 + GA-rich Low_complexity Low_complexity 2 82 0 795 116 9 37 chr20 45182839 45183060 -21484945 + (GAAA)n Simple_repeat Simple_repeat 1 214 0 226 212 71 35 chr20 45183477 45183562 -21484443 + MIR SINE MIR 110 197 -65 28 0 0 0 chr20 45183614 45183642 -21484363 + AT_rich Low_complexity Low_complexity 1 28 0 1014 251 96 24 chr20 45183645 45184146 -21483859 - L1ME2 LINE L1 0 6662 6126 363 282 94 26 chr20 45184143 45184163 -21483842 - L1ME2 LINE L1 -921 5723 5706 * 189 0 0 0 chr20 45184163 45184184 -21483821 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 363 282 94 26 chr20 45184184 45184397 -21483608 - L1ME2 LINE L1 -938 5706 5474 400 191 53 0 chr20 45184447 45184541 -21483464 - L1M4 LINE L1 -448 5726 5628 * 1975 217 79 25 chr20 45184537 45185269 -21482736 - L1ME2 LINE L1 -1160 5484 4713 1724 247 117 23 chr20 45185266 45185527 -21482478 - L1ME2 LINE L1 -4654 1992 1757 * 2219 106 7 3 chr20 45185527 45185819 -21482186 + AluSg SINE Alu 1 293 -17 1724 247 117 23 chr20 45185819 45186652 -21481353 - L1ME2 LINE L1 -4889 1757 815 901 75 42 0 chr20 45188606 45188726 -21479279 - AluSg/x SINE Alu -14 298 174 372 256 56 11 chr20 45190311 45190491 -21477514 - Charlie2 DNA MER1_type -38 2824 2637 1862 119 9 50 chr20 45190559 45190919 -21477086 + MER52C LTR ERV1 926 1278 0 5635 223 140 16 chr20 45190919 45194264 -21473741 - L1 LINE L1 -3027 3761 7 21 0 0 0 chr20 45194314 45194335 -21473670 + AT_rich Low_complexity Low_complexity 1 21 0 356 241 100 18 chr20 45194336 45194506 -21473499 - L1M1 LINE L1 -4415 3150 2967 1215 166 97 8 chr20 45194533 45194792 -21473213 + MER1B DNA MER1_type 58 339 0 1346 212 22 14 chr20 45194792 45195151 -21472854 - L1M1 LINE L1 -4587 2978 2617 431 323 31 0 chr20 45195526 45195656 -21472349 + MIR3 SINE MIR 5 138 -70 685 132 35 17 chr20 45195726 45195900 -21472105 + GA-rich Low_complexity Low_complexity 3 179 0 1776 145 76 3 chr20 45196430 45196719 -21471286 - AluSx SINE Alu -2 310 1 456 254 59 32 chr20 45196876 45197096 -21470909 - L1ME2 LINE L1 -4 6160 5935 1764 131 77 15 chr20 45197397 45197671 -21470334 - AluSx SINE Alu -17 295 5 2004 219 88 14 chr20 45198014 45198608 -21469397 + MER99 DNA DNA 2 639 -189 2227 129 0 3 chr20 45198693 45199003 -21469002 + AluSq SINE Alu 2 310 -3 402 258 11 0 chr20 45199018 45199111 -21468894 - L1M4 LINE L1 -2026 4120 4027 583 243 22 39 chr20 45199161 45199342 -21468663 - MER97c DNA MER1_type? -911 179 2 997 289 106 4 chr20 45199349 45199851 -21468154 - L1M4 LINE L1 -2121 4025 3473 257 336 28 0 chr20 45199913 45200020 -21467985 - MER58 DNA MER1_type -2142 278 169 3574 222 34 12 chr20 45200118 45202012 -21465993 - L1MB7 LINE L1 -17 6665 4726 327 311 0 0 chr20 45202035 45202125 -21465880 - L1MC4 LINE L1 -1339 6703 6614 * 335 250 71 0 chr20 45202057 45202141 -21465864 + L1MC4 LINE L1 6614 6703 -1339 183 156 0 0 chr20 45202141 45202173 -21465832 + (TA)n Simple_repeat Simple_repeat 2 33 0 4238 242 65 39 chr20 45202180 45204038 -21463967 - L1MB7 LINE L1 -4654 1992 80 798 147 7 0 chr20 45204049 45204185 -21463820 + Tigger4(Zombi) DNA MER2_type 1 137 -2594 5168 125 14 1 chr20 45204193 45205040 -21462965 + Tigger4(Zombi) DNA MER2_type 1873 2730 -1 529 306 16 8 chr20 45205171 45205499 -21462506 - L1 LINE L1 -2193 3953 3623 8363 176 34 35 chr20 45206138 45208527 -21459478 + L1M2 LINE L1 2636 5039 -1809 832 125 52 7 chr20 45208527 45208663 -21459342 - LTR13 LTR ERVK -9 998 857 304 187 27 0 chr20 45208663 45208738 -21459267 - L1 LINE L1 -958 5188 5112 250 230 35 69 chr20 45209731 45209818 -21458187 - L2 LINE L2 0 3272 3189 250 250 100 0 chr20 45210191 45210251 -21457754 - MIR SINE MIR -110 152 87 333 0 0 0 chr20 45211668 45211705 -21456300 + (GA)n Simple_repeat Simple_repeat 1 37 0 234 259 35 0 chr20 45212571 45212629 -21455376 + L2 LINE L2 3195 3254 -18 248 240 0 67 chr20 45212658 45212733 -21455272 + MIR SINE MIR 106 175 -87 1552 186 3 24 chr20 45213033 45213343 -21454662 + AluJo SINE Alu 2 305 0 207 0 0 0 chr20 45213833 45213856 -21454149 + (TC)n Simple_repeat Simple_repeat 2 24 0 2094 140 0 0 chr20 45213938 45214246 -21453759 + AluSx SINE Alu 1 308 -4 247 346 31 31 chr20 45214438 45214483 -21453522 - MIR3 SINE MIR -10 198 154 769 194 124 35 chr20 45214483 45214684 -21453321 + MER58A DNA MER1_type 5 223 -1 247 346 31 31 chr20 45214684 45214768 -21453237 - MIR3 SINE MIR -53 155 69 1730 124 73 0 chr20 45214893 45215167 -21452838 + AluSq SINE Alu 1 294 -19 226 260 26 52 chr20 45215235 45215312 -21452693 - L2 LINE L2 -7 3306 3232 301 246 127 48 chr20 45215374 45215500 -21452505 + MIR SINE MIR 91 226 -36 429 106 43 21 chr20 45215690 45215784 -21452221 + (TAGA)n Simple_repeat Simple_repeat 1 96 0 296 80 6 13 chr20 45215784 45215839 -21452166 + MLT2C1 LTR ERVL 359 394 -3 1263 213 54 17 chr20 45215991 45216287 -21451718 + MER45C DNA AcHobo 647 953 0 244 245 53 21 chr20 45217935 45218029 -21449976 - MIR SINE MIR -56 206 110 475 215 128 47 chr20 45218245 45218417 -21449588 + MIR3 SINE MIR 9 194 -14 394 221 98 8 chr20 45218525 45218647 -21449358 - MIR SINE MIR -102 160 28 246 340 113 0 chr20 45218816 45218966 -21449039 - MLT1K LTR MaLR -107 481 315 399 323 65 35 chr20 45219028 45219229 -21448776 - MLT1K LTR MaLR -372 216 10 543 292 46 44 chr20 45219963 45220269 -21447736 - L1MEd LINE L1 -4862 1257 948 3335 138 23 20 chr20 45220269 45220829 -21447176 - L1PA15 LINE L1 -6 6159 5598 543 292 46 44 chr20 45220829 45220888 -21447117 - L1MEd LINE L1 -5171 948 891 840 114 0 0 chr20 45221316 45221439 -21446566 + FLAM_C SINE Alu 21 143 0 287 288 0 12 chr20 45222319 45222399 -21445606 + MIR SINE MIR 20 98 -164 406 307 29 0 chr20 45222414 45222554 -21445451 - MIR SINE MIR -8 254 111 456 323 88 23 chr20 45222844 45223401 -21444604 - L1M4 LINE L1 -1112 5034 4442 564 330 28 30 chr20 45223447 45223881 -21444124 - L1M4 LINE L1 -1896 4250 3818 206 61 0 30 chr20 45223881 45223914 -21444091 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 1168 185 20 54 chr20 45223961 45224259 -21443746 - L1MC4 LINE L1 0 8042 7755 351 327 36 45 chr20 45224394 45224614 -21443391 - L1M4 LINE L1 -2499 3647 3430 1197 230 3 63 chr20 45225160 45225311 -21442694 + AluJo SINE Alu 1 159 -143 1152 83 11 11 chr20 45225311 45225491 -21442514 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 729 0 0 0 chr20 45225492 45225573 -21442432 + (GGAAA)n Simple_repeat Simple_repeat 1 81 0 1197 230 3 63 chr20 45225573 45225737 -21442268 + AluJo SINE Alu 158 299 -3 278 273 91 9 chr20 45226250 45226360 -21441645 + LTR67 LTR ERVL 439 557 0 308 293 20 20 chr20 45226367 45226466 -21441539 - MIR SINE MIR -148 114 16 2410 230 22 2 chr20 45226545 45227053 -21440952 - LTR53 LTR ERVL -1 518 1 1740 187 0 0 chr20 45227667 45227972 -21440033 + AluJb SINE Alu 1 305 -7 698 158 127 48 chr20 45228680 45228845 -21439160 + AluJo SINE Alu 121 298 -14 396 285 39 8 chr20 45229309 45229439 -21438566 - MIR3 SINE MIR -1 207 74 409 346 64 8 chr20 45229637 45229871 -21438134 + MIR SINE MIR 16 262 0 261 320 10 48 chr20 45230172 45230275 -21437730 + MIR3 SINE MIR 94 192 -16 424 330 86 34 chr20 45230628 45230837 -21437168 + L2 LINE L2 3050 3269 -3 357 318 9 9 chr20 45230812 45230919 -21437086 + L2 LINE L2 3190 3296 -17 * 237 163 0 23 chr20 45231248 45231291 -21436714 - 7SK RNA RNA -127 66 25 4070 191 23 57 chr20 45231896 45232934 -21435071 - L1ME2 LINE L1 -16 6148 5153 294 291 12 12 chr20 45233062 45233148 -21434857 - MIR SINE MIR -70 192 107 333 291 33 67 chr20 45233567 45233926 -21434079 - L1ME4a LINE L1 -257 5864 5522 429 254 40 69 chr20 45234093 45234266 -21433739 + MIR SINE MIR 24 191 -71 2322 82 0 0 chr20 45234431 45234734 -21433271 + AluSp SINE Alu 1 303 -10 243 0 0 0 chr20 45234838 45234865 -21433140 + (T)n Simple_repeat Simple_repeat 1 27 0 1713 153 20 84 chr20 45235067 45235142 -21432863 + L1MC3 LINE L1 7319 7397 -388 2134 111 3 7 chr20 45235142 45235449 -21432556 + AluSx SINE Alu 1 306 -6 1713 153 20 84 chr20 45235449 45235764 -21432241 + L1MC3 LINE L1 7397 7684 -101 305 198 12 37 chr20 45235764 45235845 -21432160 + L1MC2 LINE L1 6247 6325 -19 2710 217 25 70 chr20 45235913 45235972 -21432033 + L2 LINE L2 1764 1824 -1490 2784 119 11 28 chr20 45235972 45236214 -21431791 - MSTA LTR MaLR 0 428 195 2347 88 3 0 chr20 45236214 45236521 -21431484 - AluSq SINE Alu -5 308 1 2784 119 11 28 chr20 45236521 45236713 -21431292 - MSTA LTR MaLR -233 195 1 2710 217 25 70 chr20 45236713 45237078 -21430927 + L2 LINE L2 1824 2136 -1178 2547 109 0 0 chr20 45237078 45237428 -21430577 - L1PA13 LINE L1 0 6163 5814 2710 217 25 70 chr20 45237428 45237812 -21430193 + L2 LINE L2 2136 2536 -778 281 269 250 0 chr20 45238411 45238515 -21429490 + MIR SINE MIR 133 262 0 451 293 37 65 chr20 45238545 45238760 -21429245 - MIR SINE MIR -53 209 1 1806 121 89 0 chr20 45238841 45239122 -21428883 + AluSx SINE Alu 1 306 -6 1649 143 32 51 chr20 45239302 45239616 -21428389 + AluJb SINE Alu 1 308 -4 237 150 0 0 chr20 45240329 45240369 -21427636 + L2 LINE L2 3251 3290 -23 685 155 19 0 chr20 45240501 45240818 -21427187 + (CA)n Simple_repeat Simple_repeat 1 323 0 361 318 11 0 chr20 45241114 45241250 -21426755 + MIR SINE MIR 23 160 -61 270 282 30 47 chr20 45241597 45241747 -21426258 + MIR SINE MIR 64 210 -52 1716 185 0 0 chr20 45241755 45242047 -21425958 + AluJb SINE Alu 1 292 -20 305 268 10 10 chr20 45242133 45242230 -21425775 + L1MC/D LINE L1 5732 5828 -1980 271 158 0 53 chr20 45242235 45242292 -21425713 - LTR67 LTR ERVL -7 550 497 2090 104 0 0 chr20 45242426 45242739 -21425266 + AluSc SINE Alu 1 313 0 546 253 82 94 chr20 45242938 45243171 -21424834 - MIR SINE MIR -2 260 31 1797 164 7 0 chr20 45243309 45243608 -21424397 - AluSx SINE Alu -11 301 1 890 190 45 0 chr20 45243868 45244047 -21423958 - MER5A DNA MER1_type 0 189 3 2282 86 3 3 chr20 45244078 45244381 -21423624 - AluSq SINE Alu -2 311 9 187 322 161 4 chr20 45244551 45244793 -21423212 + L2 LINE L2 2811 3090 -223 449 202 89 1 chr20 45244824 45244979 -21423026 - MER3 DNA MER1_type -15 194 3 468 291 82 61 chr20 45244990 45245186 -21422819 + L2 LINE L2 3103 3302 -11 454 302 127 5 chr20 45245606 45245795 -21422210 + MIR SINE MIR 31 242 -20 190 219 26 65 chr20 45246210 45246328 -21421677 + MER5A DNA MER1_type 39 188 -1 304 244 44 52 chr20 45246437 45246572 -21421433 + L2 LINE L2 2951 3084 -188 2201 97 3 3 chr20 45246816 45247126 -21420879 - AluSg SINE Alu 0 310 1 300 292 92 8 chr20 45247339 45247459 -21420546 + MIR3 SINE MIR 33 162 -46 223 219 0 0 chr20 45248335 45248376 -21419629 - MIR SINE MIR -175 87 47 368 229 24 0 chr20 45248732 45248815 -21419190 + MIR3 SINE MIR 78 162 -46 199 283 0 0 chr20 45249146 45249199 -21418806 + MIR SINE MIR 10 62 -200 1507 191 127 31 chr20 45249200 45249318 -21418687 + MLT1D LTR MaLR 1 106 -361 2310 74 0 7 chr20 45249318 45249616 -21418389 + AluSp SINE Alu 1 296 -17 1507 191 127 31 chr20 45249616 45249936 -21418069 + MLT1D LTR MaLR 106 460 -7 585 232 65 42 chr20 45249936 45250104 -21417901 + MIR SINE MIR 58 229 -33 269 306 197 0 chr20 45250135 45250282 -21417723 - MIR SINE MIR -2 260 85 412 273 76 8 chr20 45251563 45251695 -21416310 + MIR SINE MIR 15 155 -107 192 77 0 0 chr20 45251731 45251757 -21416248 + (TG)n Simple_repeat Simple_repeat 1 26 0 631 228 181 0 chr20 45251778 45251927 -21416078 - MER5A DNA MER1_type -3 186 11 736 184 55 12 chr20 45251930 45252093 -21415912 + MER3 DNA MER1_type 2 124 -85 3298 143 9 42 chr20 45252160 45252705 -21415300 + MER1A DNA MER1_type 1 527 0 915 227 0 26 chr20 45252729 45252858 -21415147 + MER5A DNA MER1_type 1 125 -64 1963 114 37 0 chr20 45252858 45253155 -21414850 - AluY SINE Alu -3 308 1 915 227 0 26 chr20 45253155 45253219 -21414786 + MER5A DNA MER1_type 125 189 0 375 188 38 0 chr20 45253287 45253367 -21414638 + HsTC2 DNA Tc2 1812 1894 -4 2348 81 0 0 chr20 45253402 45253710 -21414295 + AluY SINE Alu 1 308 -3 274 270 90 36 chr20 45254013 45254124 -21413881 - MIR3 SINE MIR -11 197 81 296 242 30 20 chr20 45254236 45254335 -21413670 + (TA)n Simple_repeat Simple_repeat 1 100 0 1669 114 98 4 chr20 45254336 45254600 -21413405 - AluSx SINE Alu -23 289 1 354 305 166 7 chr20 45255105 45255256 -21412749 - MER5A DNA MER1_type -6 183 9 235 169 51 51 chr20 45256137 45256196 -21411809 - L2 LINE L2 0 3272 3214 315 104 0 0 chr20 45256207 45256255 -21411750 + (CACCAT)n Simple_repeat Simple_repeat 5 52 0 345 214 0 0 chr20 45256332 45256402 -21411603 - MIR SINE MIR -1 261 192 618 252 130 29 chr20 45256405 45256643 -21411362 - MIR SINE MIR 0 262 1 360 316 108 35 chr20 45256865 45256909 -21411096 - L2 LINE L2 -218 3054 3015 1261 226 43 94 chr20 45256909 45257076 -21410929 + MLT1A2 LTR MaLR 1 175 -199 1790 144 41 0 chr20 45257076 45257368 -21410637 + AluSx SINE Alu 1 304 -8 1261 226 43 94 chr20 45257368 45257423 -21410582 + MLT1A2 LTR MaLR 175 231 -143 312 83 0 0 chr20 45257423 45257471 -21410534 + (TG)n Simple_repeat Simple_repeat 2 49 0 1261 226 43 94 chr20 45257471 45257641 -21410364 + MLT1A2 LTR MaLR 231 374 0 360 316 108 35 chr20 45257641 45257827 -21410178 - L2 LINE L2 -257 3015 2807 369 238 130 9 chr20 45257838 45258061 -21409944 + MER112 DNA MER1_type 1 250 -10 236 338 70 7 chr20 45258067 45258209 -21409796 - L2 LINE L2 -526 2788 2638 230 242 17 87 chr20 45259079 45259179 -21408826 + MIR3 SINE MIR 93 180 -28 201 291 18 0 chr20 45259302 45259357 -21408648 + GA-rich Low_complexity Low_complexity 1 56 0 210 379 26 0 chr20 45259790 45259906 -21408099 + MIR SINE MIR 130 248 -14 811 122 0 0 chr20 45259971 45260086 -21407919 + FLAM_C SINE Alu 15 129 -14 2293 106 0 0 chr20 45260269 45260581 -21407424 + AluSx SINE Alu 1 312 0 582 272 84 25 chr20 45262513 45262752 -21405253 - MER102a DNA MER1_type -1 329 77 291 123 10 30 chr20 45262802 45262870 -21405135 - MIR SINE MIR -62 146 82 2218 93 0 3 chr20 45263271 45263573 -21404432 - AluSx SINE Alu -11 301 1 553 313 15 15 chr20 45263650 45263848 -21404157 - MIR SINE MIR -30 232 35 202 272 272 0 chr20 45264481 45264584 -21403421 - MIR SINE MIR -59 149 19 537 259 25 19 chr20 45265136 45265294 -21402711 - MIR3 SINE MIR -8 200 42 1056 277 58 82 chr20 45267406 45267793 -21400212 - L2 LINE L2 0 3313 2918 2202 85 7 3 chr20 45267793 45268098 -21399907 + AluSx SINE Alu 1 306 -6 1056 277 58 82 chr20 45268098 45268309 -21399696 - L2 LINE L2 -395 2918 2703 1591 173 16 29 chr20 45268309 45268615 -21399390 + AluJb SINE Alu 11 312 0 1056 277 58 82 chr20 45268615 45268895 -21399110 - L2 LINE L2 -610 2703 2476 1625 163 0 58 chr20 45270180 45270493 -21397512 + AluJb SINE Alu 5 299 -13 965 117 0 6 chr20 45270752 45270931 -21397074 + (CCCTAA)n Simple_repeat Simple_repeat 1 178 0 274 307 70 18 chr20 45271087 45271201 -21396804 - MIR SINE MIR -37 225 106 2147 125 0 0 chr20 45272269 45272572 -21395433 + AluSq SINE Alu 1 303 -10 359 340 50 77 chr20 45272629 45272928 -21395077 + L1M4 LINE L1 2804 3085 -3061 2064 123 3 7 chr20 45272928 45273238 -21394767 + AluSg SINE Alu 1 309 -1 359 340 50 77 chr20 45273238 45273459 -21394546 + L1M4 LINE L1 3085 3310 -2836 398 97 139 14 chr20 45276745 45276817 -21391188 - MER45A DNA AcHobo -1 177 97 308 238 191 16 chr20 45276808 45276934 -21391071 - MER45A DNA AcHobo -30 148 1 * 235 309 114 32 chr20 45277008 45277131 -21390874 + L2 LINE L2 3163 3295 -18 1352 122 7 86 chr20 45277253 45277376 -21390629 + AluJo SINE Alu 21 111 -201 2399 52 0 7 chr20 45277376 45277686 -21390319 + AluY SINE Alu 1 308 -3 1352 122 7 86 chr20 45277686 45277841 -21390164 + AluJo SINE Alu 111 277 -35 466 263 0 88 chr20 45277922 45277967 -21390038 + MER5B DNA MER1_type 20 67 -111 2233 82 0 26 chr20 45277967 45278271 -21389734 + AluSx SINE Alu 1 296 -16 466 263 0 88 chr20 45278271 45278396 -21389609 + MER5B DNA MER1_type 67 175 -3 289 229 131 63 chr20 45278402 45278560 -21389445 - MIR3 SINE MIR -59 149 2 198 103 0 0 chr20 45278718 45278747 -21389258 + (TTTC)n Simple_repeat Simple_repeat 2 30 0 1991 123 7 32 chr20 45278891 45279201 -21388804 + AluSx SINE Alu 1 302 -10 1137 123 12 0 chr20 45279203 45279374 -21388631 + AluSg/x SINE Alu 133 305 -5 657 191 85 21 chr20 45279546 45279687 -21388318 - MLT1E1 LTR MaLR -500 154 5 509 162 0 0 chr20 45279829 45279903 -21388102 + tRNA-Val-GTG tRNA tRNA 1 74 -2 2165 119 0 0 chr20 45279983 45280285 -21387720 + AluSx SINE Alu 1 302 -10 2447 197 35 16 chr20 45280425 45280942 -21387063 + MLT1F LTR MaLR 8 534 -8 1831 67 0 8 chr20 45280950 45281188 -21386817 - AluY SINE Alu -6 305 70 191 227 23 0 chr20 45281236 45281280 -21386725 - MIR SINE MIR -1 261 217 958 192 25 15 chr20 45281382 45281580 -21386425 + MER3 DNA MER1_type 10 209 0 732 240 45 20 chr20 45281811 45282011 -21385994 + MIR SINE MIR 30 234 -28 576 209 115 81 chr20 45282280 45282515 -21385490 - Charlie8 DNA MER1_type -2136 281 39 657 188 193 11 chr20 45283178 45283354 -21384651 + MER3 DNA MER1_type 2 209 0 216 0 0 0 chr20 45283852 45283876 -21384129 + (A)n Simple_repeat Simple_repeat 1 24 0 198 0 0 0 chr20 45283921 45283943 -21384062 + (CAAAAA)n Simple_repeat Simple_repeat 4 25 0 2142 88 28 0 chr20 45285120 45285403 -21382602 - AluSg SINE Alu -19 291 1 615 281 107 0 chr20 45285700 45285896 -21382109 + MIR SINE MIR 28 244 -18 311 250 22 43 chr20 45286436 45286528 -21381477 + MIR SINE MIR 17 106 -156 193 222 0 22 chr20 45286760 45286805 -21381200 + MIR3 SINE MIR 114 157 -51 389 290 52 26 chr20 45287296 45287451 -21380554 - MIR SINE MIR -44 218 60 289 296 99 31 chr20 45288266 45288428 -21379577 + L1ME LINE L1 5510 5682 -439 1113 64 0 13 chr20 45288438 45288594 -21379411 + MER41A LTR ERV1 401 554 0 529 133 22 0 chr20 45288594 45288684 -21379321 + MER41A-int LTR ERV1 1 92 -7664 * 1562 89 9 0 chr20 45288680 45288894 -21379111 + MER41B-int LTR ERV1 5729 5944 -2 3543 115 20 0 chr20 45288894 45289433 -21378572 + MER41B LTR ERV1 1 550 -85 242 288 206 22 chr20 45289442 45289626 -21378379 + L1ME LINE L1 5691 5908 -213 2085 100 13 17 chr20 45289629 45289929 -21378076 - AluSx SINE Alu -13 299 1 207 0 0 0 chr20 45290059 45290082 -21377923 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1607 130 71 0 chr20 45290088 45290341 -21377664 - AluSx SINE Alu -37 275 5 185 167 0 0 chr20 45290674 45290704 -21377301 + MIR SINE MIR 116 145 -117 230 264 81 23 chr20 45290786 45290855 -21377150 + MER5A DNA MER1_type 6 82 -107 2193 103 0 0 chr20 45290855 45291156 -21376849 + AluSx SINE Alu 1 301 -11 230 264 81 23 chr20 45291156 45291173 -21376832 + MER5A DNA MER1_type 82 97 -92 313 286 127 16 chr20 45291204 45291330 -21376675 - L1MC4a LINE L1 -1936 5872 5733 2088 91 0 17 chr20 45291469 45291765 -21376240 - AluSc SINE Alu -18 291 1 307 287 0 8 chr20 45291846 45291949 -21376056 + L1MA9 LINE L1 6167 6270 -42 2371 82 3 0 chr20 45291949 45292255 -21375750 - AluSg SINE Alu -3 307 1 307 287 0 8 chr20 45292255 45292280 -21375725 + L1MA9 LINE L1 6270 6294 -18 307 220 229 8 chr20 45292281 45292399 -21375606 - MIR SINE MIR -6 256 113 1359 143 5 14 chr20 45292647 45292864 -21375141 - AluJb SINE Alu -13 299 85 352 283 20 0 chr20 45293481 45293580 -21374425 + MIR SINE MIR 19 119 -89 2165 108 0 3 chr20 45293599 45293896 -21374109 + AluSx SINE Alu 1 296 -16 213 305 219 31 chr20 45293908 45294118 -21373887 - MIR SINE MIR -2 260 13 306 276 124 28 chr20 45294870 45295015 -21372990 - MIR3 SINE MIR -6 202 44 416 287 9 0 chr20 45295613 45295728 -21372277 - MIR SINE MIR -101 161 46 230 311 98 33 chr20 45296091 45296213 -21371792 - MIR SINE MIR -61 147 18 1843 129 61 0 chr20 45296943 45297222 -21370783 + AluJb SINE Alu 1 296 -16 320 312 73 0 chr20 45297397 45297506 -21370499 - MIR SINE MIR -63 145 29 592 311 112 0 chr20 45297706 45297912 -21370093 - MIR SINE MIR -20 242 14 355 295 150 0 chr20 45298461 45298634 -21369371 + MIR SINE MIR 64 262 0 197 220 60 0 chr20 45298852 45298902 -21369103 - MIR SINE MIR -131 131 79 310 249 67 12 chr20 45299305 45299412 -21368593 + MIR SINE MIR 31 141 -67 188 305 11 42 chr20 45300574 45300669 -21367336 - MIR SINE MIR -72 136 45 290 315 109 42 chr20 45301266 45301431 -21366574 - MIR SINE MIR -21 241 66 401 287 62 0 chr20 45302233 45302362 -21365643 - MIR3 SINE MIR -13 195 59 189 224 122 0 chr20 45302459 45302508 -21365497 + MIR SINE MIR 87 141 -67 195 250 0 19 chr20 45302600 45302652 -21365353 - L2 LINE L2 0 3272 3222 252 293 71 0 chr20 45302799 45302898 -21365107 - MIR3 SINE MIR -9 199 94 252 320 70 8 chr20 45303578 45303706 -21364299 + MIR3 SINE MIR 66 201 -7 453 261 99 76 chr20 45304349 45304560 -21363445 + MIR SINE MIR 12 227 -35 262 254 91 64 chr20 45305188 45305298 -21362707 - MIR3 SINE MIR -49 159 47 189 45 45 45 chr20 45305936 45305980 -21362025 + (CCCCG)n Simple_repeat Simple_repeat 5 48 0 331 232 49 0 chr20 45306144 45306226 -21361779 - MIR3 SINE MIR -34 174 89 1440 128 41 88 chr20 45306311 45306565 -21361440 - MER58B DNA MER1_type -2079 341 77 1643 138 7 28 chr20 45306565 45306899 -21361106 + AluJb SINE Alu 1 328 0 1440 128 41 88 chr20 45306899 45306921 -21361084 - MER58B DNA MER1_type -2343 77 77 2104 114 10 0 chr20 45306921 45307228 -21360777 + AluSx SINE Alu 1 310 -2 1440 128 41 88 chr20 45307228 45307269 -21360736 - MER58B DNA MER1_type -2342 78 37 836 280 134 18 chr20 45307527 45307916 -21360089 + Charlie2a DNA MER1_type 272 705 -2157 787 188 188 0 chr20 45307921 45308150 -21359855 + Charlie2a DNA MER1_type 1853 2124 -738 1474 164 130 18 chr20 45308152 45308409 -21359596 + MER63B DNA MER1_type 1 304 -758 2171 100 13 3 chr20 45308409 45308709 -21359296 - AluSc SINE Alu -6 303 1 1474 164 130 18 chr20 45308709 45308781 -21359224 + MER63B DNA MER1_type 304 367 -69 1274 192 53 0 chr20 45308811 45308956 -21359049 - AluJb SINE Alu -31 281 116 390 42 0 0 chr20 45308956 45309004 -21359001 + (TTA)n Simple_repeat Simple_repeat 2 49 0 1274 192 53 0 chr20 45309004 45309103 -21358902 - AluJb SINE Alu -196 116 24 612 145 40 125 chr20 45309179 45309253 -21358752 + Charlie2a DNA MER1_type 2122 2201 -661 189 0 0 0 chr20 45309253 45309274 -21358731 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 1775 167 0 0 chr20 45309276 45309552 -21358453 - AluSx SINE Alu -32 280 5 612 145 40 125 chr20 45309552 45309674 -21358331 + Charlie2a DNA MER1_type 2202 2304 -558 2392 148 57 7 chr20 45309690 45310096 -21357909 + MSTB LTR MaLR 1 426 0 1707 190 14 14 chr20 45310102 45310115 -21357890 + Charlie2a DNA MER1_type 2432 2444 -418 321 185 0 0 chr20 45310115 45310180 -21357825 + L1MA10 LINE L1 6266 6330 -4 1707 190 14 14 chr20 45310180 45310581 -21357424 + Charlie2a DNA MER1_type 2443 2846 -16 293 242 221 68 chr20 45311670 45311860 -21356145 + MIR SINE MIR 16 234 -28 244 279 19 29 chr20 45312122 45312226 -21355779 - MIR3 SINE MIR -1 207 105 571 297 33 24 chr20 45312280 45312492 -21355513 + L2 LINE L2 3098 3311 -2 225 324 148 0 chr20 45312555 45312663 -21355342 - L2 LINE L2 -2 3270 3147 266 272 62 0 chr20 45313189 45313270 -21354735 - MIR SINE MIR -78 184 99 242 170 137 21 chr20 45313296 45313393 -21354612 + MLT1H LTR MaLR 287 549 0 342 250 109 77 chr20 45313591 45313747 -21354258 + L2 LINE L2 3151 3311 -2 1660 174 0 7 chr20 45313919 45314218 -21353787 + AluJo SINE Alu 1 297 -15 2090 121 3 3 chr20 45314218 45314524 -21353481 + AluSq SINE Alu 1 306 -7 912 184 63 44 chr20 45314538 45314744 -21353261 - MER2 DNA MER2_type -135 210 1 381 253 32 11 chr20 45314969 45315109 -21352896 + MIR SINE MIR 69 208 -54 2020 125 0 3 chr20 45315135 45315431 -21352574 - AluSx SINE Alu -17 295 1 685 280 70 6 chr20 45315456 45315677 -21352328 + MIR SINE MIR 20 252 -10 255 125 0 0 chr20 45315997 45316037 -21351968 + (GGGA)n Simple_repeat Simple_repeat 1 40 0 243 261 109 34 chr20 45316083 45316202 -21351803 - MIR SINE MIR -11 251 124 658 229 91 57 chr20 45316238 45316448 -21351557 - MIR SINE MIR -21 241 25 329 189 68 106 chr20 45316674 45316806 -21351199 - MIR3 SINE MIR -6 202 76 346 376 0 32 chr20 45316858 45317015 -21350990 - MER5A DNA MER1_type -2 187 36 285 212 71 59 chr20 45317046 45317131 -21350874 - MIR3 SINE MIR -52 156 71 186 133 0 0 chr20 45317746 45317776 -21350229 + (TCCC)n Simple_repeat Simple_repeat 4 33 0 1387 146 40 86 chr20 45317802 45317962 -21350043 + AluJo SINE Alu 1 142 -170 2138 101 3 0 chr20 45317962 45318250 -21349755 + AluSx SINE Alu 1 289 -23 1387 146 40 86 chr20 45318250 45318391 -21349614 + AluJo SINE Alu 142 288 -24 496 251 103 29 chr20 45318435 45318610 -21349395 + MIR SINE MIR 32 219 -43 2390 70 0 0 chr20 45318933 45319233 -21348772 - AluY SINE Alu -11 300 1 428 217 165 0 chr20 45319283 45319398 -21348607 - MIR3 SINE MIR -28 180 47 191 211 0 0 chr20 45319532 45319570 -21348435 - L2 LINE L2 -1 3312 3275 2230 64 3 0 chr20 45319816 45320134 -21347871 - AluSp SINE Alu 0 319 1 263 299 38 96 chr20 45320137 45320294 -21347711 + MIR3 SINE MIR 47 194 -14 330 279 38 0 chr20 45321229 45321327 -21346678 + MIR SINE MIR 49 149 -73 224 238 58 122 chr20 45321327 45321499 -21346506 + MIR3 SINE MIR 2 162 -46 318 272 114 0 chr20 45321511 45321641 -21346364 + MIR SINE MIR 9 153 -55 343 248 75 35 chr20 45321654 45321788 -21346217 + MIR3 SINE MIR 9 144 -87 312 252 9 37 chr20 45321911 45321931 -21346074 + MIR3 SINE MIR 2 21 -187 2730 13 0 0 chr20 45321931 45322239 -21345766 - AluYa5 SINE Alu -3 308 1 312 252 9 37 chr20 45322239 45322325 -21345680 + MIR3 SINE MIR 21 105 -103 628 229 62 14 chr20 45322650 45322794 -21345211 - MER58A DNA MER1_type 0 151 1 238 286 122 68 chr20 45322795 45322942 -21345063 + MIR SINE MIR 59 213 -49 408 236 150 7 chr20 45323414 45323554 -21344451 + MIR3 SINE MIR 14 173 -35 925 217 90 5 chr20 45323584 45323796 -21344209 + MIR SINE MIR 2 231 -31 680 272 38 86 chr20 45323819 45324109 -21343896 + Charlie8 DNA MER1_type 1 276 -2141 549 322 77 7 chr20 45326357 45326630 -21341375 - MARNA DNA Mariner -159 427 136 661 276 94 10 chr20 45326648 45326851 -21341154 - MIR SINE MIR 0 262 43 1885 120 3 58 chr20 45327060 45327385 -21340620 - AluJb SINE Alu -1 311 5 1899 139 0 23 chr20 45327393 45327694 -21340311 - AluSq SINE Alu -18 295 2 497 201 52 30 chr20 45328482 45328616 -21339389 + MIR SINE MIR 29 165 -97 249 33 0 0 chr20 45328621 45328651 -21339354 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 367 296 48 0 chr20 45328671 45328796 -21339209 + MIR SINE MIR 132 262 0 448 298 129 0 chr20 45328898 45329069 -21338936 - MIR SINE MIR -7 255 63 232 274 71 0 chr20 45329386 45329470 -21338535 - MIR SINE MIR -91 171 82 288 237 22 12 chr20 45330982 45331084 -21336921 + MIR SINE MIR 22 131 -77 1969 142 3 0 chr20 45331737 45332040 -21335965 - AluJo SINE Alu -8 304 1 371 87 67 45 chr20 45333493 45333565 -21334440 + AluJb SINE Alu 77 135 -167 193 182 182 0 chr20 45333572 45333627 -21334378 + MIR3 SINE MIR 135 199 -9 871 240 35 31 chr20 45333916 45334170 -21333835 + MIR SINE MIR 2 256 -6 192 40 0 0 chr20 45334230 45334255 -21333750 + (TAAAAA)n Simple_repeat Simple_repeat 4 28 0 558 270 54 29 chr20 45334424 45334628 -21333377 + MIR SINE MIR 17 225 -37 1769 123 7 22 chr20 45335124 45335400 -21332605 + AluSx SINE Alu 1 272 -40 402 280 29 81 chr20 45335953 45336101 -21331904 - MIR SINE MIR -58 150 45 319 271 53 60 chr20 45336146 45336204 -21331801 - L2 LINE L2 0 3313 3256 2253 100 0 0 chr20 45336204 45336513 -21331492 - AluSc SINE Alu 0 309 1 319 271 53 60 chr20 45336513 45336587 -21331418 - L2 LINE L2 -57 3256 3182 1684 194 101 22 chr20 45336589 45337033 -21330972 + MER63C DNA MER1_type 1 479 -451 1081 221 24 4 chr20 45337095 45337344 -21330661 + MER63C DNA MER1_type 679 932 0 296 321 52 16 chr20 45337345 45337538 -21330467 - L2 LINE L2 -163 3150 2951 234 221 164 3 chr20 45337601 45337682 -21330323 - MER5A DNA MER1_type -3 175 90 519 262 8 8 chr20 45338218 45338340 -21329665 + L2 LINE L2 3191 3312 -1 269 266 89 32 chr20 45338367 45338525 -21329480 - L2 LINE L2 -173 3099 2933 191 239 136 34 chr20 45338609 45338697 -21329308 - MIR SINE MIR -72 136 40 3680 161 29 40 chr20 45338740 45338776 -21329229 - L1MB3 LINE L1 -15 6168 6133 2039 137 0 0 chr20 45338776 45339075 -21328930 - AluSx SINE Alu -13 299 1 3680 161 29 40 chr20 45339075 45339385 -21328620 - L1MB3 LINE L1 -50 6133 5821 2071 124 3 0 chr20 45339385 45339683 -21328322 + AluSq SINE Alu 3 301 -12 3680 161 29 40 chr20 45339683 45340063 -21327942 - L1MB3 LINE L1 -362 5821 5449 3494 200 49 40 chr20 45340120 45341130 -21326875 - L1ME1 LINE L1 -5 6161 5162 2333 84 0 0 chr20 45341130 45341429 -21326576 - AluY SINE Alu -12 299 1 3494 200 49 40 chr20 45341429 45341654 -21326351 - L1ME1 LINE L1 -1004 5162 4919 1642 154 56 0 chr20 45341654 45341939 -21326066 - AluSx SINE Alu -11 301 1 3494 200 49 40 chr20 45341939 45341982 -21326023 - L1ME1 LINE L1 -1247 4919 4878 232 232 0 0 chr20 45341976 45342032 -21325973 - L1ME1 LINE L1 -1495 4651 4596 * 716 182 84 159 chr20 45342150 45342439 -21325566 - L1MD2 LINE L1 0 6357 5984 2180 112 0 3 chr20 45342439 45342752 -21325253 - AluSx SINE Alu 0 312 1 716 182 84 159 chr20 45342752 45342820 -21325185 - L1MD2 LINE L1 -373 5984 5912 708 130 37 0 chr20 45342830 45342938 -21325067 - L1MD2 LINE L1 -422 5937 5826 2426 189 123 58 chr20 45342948 45343651 -21324354 - L1MD1 LINE L1 -39 6597 5941 2163 99 0 0 chr20 45343651 45343960 -21324045 + AluSx SINE Alu 1 309 0 2426 189 123 58 chr20 45343960 45344051 -21323954 - L1MD1 LINE L1 -695 5941 5857 1355 176 73 7 chr20 45344051 45344324 -21323681 - AluJo SINE Alu -21 291 1 2426 189 123 58 chr20 45344324 45344542 -21323463 - L1MD1 LINE L1 -779 5857 4456 2771 215 24 47 chr20 45344557 45345422 -21322583 + L1M4 LINE L1 2449 3293 -2853 2024 117 3 0 chr20 45345422 45345728 -21322277 - AluSx SINE Alu 0 307 1 516 246 0 0 chr20 45346203 45346337 -21321668 - L1MD1 LINE L1 -3249 3291 3158 733 186 6 64 chr20 45346337 45346509 -21321496 + FRAM SINE Alu 1 153 -23 4649 243 54 34 chr20 45346514 45346692 -21321313 - L1MD1 LINE L1 -3389 3151 2978 2308 78 7 0 chr20 45346692 45346987 -21321018 - AluSx SINE Alu -11 301 5 4649 243 54 34 chr20 45346987 45347972 -21320033 - L1MD1 LINE L1 -3562 2978 1968 4823 138 23 61 chr20 45347972 45348870 -21319135 + MER6 DNA MER2_type 1 864 -1 4649 243 54 34 chr20 45348870 45349373 -21318632 - L1MD1 LINE L1 -4572 1968 1476 465 174 0 23 chr20 45349374 45349460 -21318545 - AluS SINE Alu -229 84 1 267 302 74 42 chr20 45349463 45349652 -21318353 - MLT1F1-int LTR MaLR -485 886 692 1580 81 27 5 chr20 45349821 45350043 -21317962 - AluSg/x SINE Alu 0 310 84 299 260 14 0 chr20 45350140 45350213 -21317792 - MLT1F1-int LTR MaLR -770 601 528 232 193 18 18 chr20 45350224 45350281 -21317724 - MER20 DNA MER1_type 0 219 163 917 190 25 0 chr20 45350310 45350468 -21317537 - MER20 DNA MER1_type -52 167 6 564 275 0 0 chr20 45350468 45350606 -21317399 - MLT1F1-int LTR MaLR -836 535 398 1631 126 123 0 chr20 45350677 45350954 -21317051 + AluSq SINE Alu 3 313 0 322 241 194 29 chr20 45350989 45351159 -21316846 - MLT1F1-int LTR MaLR -1173 198 1 1599 249 48 32 chr20 45351219 45351656 -21316349 - MLT1F1 LTR MaLR -7 560 117 2631 172 61 181 chr20 45351676 45352923 -21315082 + MER52A LTR ERV1 659 1755 0 2120 135 0 0 chr20 45353045 45353356 -21314649 - AluSx SINE Alu -1 311 1 207 204 0 0 chr20 45353357 45353401 -21314604 + T-rich Low_complexity Low_complexity 1 44 0 2214 105 0 0 chr20 45353416 45353721 -21314284 - AluSx SINE Alu -7 305 1 1674 176 3 7 chr20 45353723 45354019 -21313986 - AluJb SINE Alu -15 297 3 1856 157 7 0 chr20 45354027 45354332 -21313673 - AluJb SINE Alu -5 307 1 1752 217 85 74 chr20 45354335 45355186 -21312819 - L1MEc LINE L1 -3219 3722 2873 1168 252 49 45 chr20 45355207 45355412 -21312593 - LTR40c LTR ERVL -63 399 196 198 0 0 0 chr20 45355412 45355434 -21312571 + (TTTTA)n Simple_repeat Simple_repeat 4 25 0 843 154 0 0 chr20 45355444 45355567 -21312438 - FLAM_C SINE Alu -10 123 1 1168 252 49 45 chr20 45355567 45355759 -21312246 - LTR40c LTR ERVL -274 188 1 565 186 0 24 chr20 45355806 45355930 -21312075 - L1MA9 LINE L1 -25 6287 6167 2001 224 176 54 chr20 45355936 45356968 -21311037 - L1MEc LINE L1 -4124 2817 1913 2683 100 14 0 chr20 45356968 45357338 -21310667 + THE1C LTR MaLR 1 375 0 10084 110 32 46 chr20 45357338 45358939 -21309066 + THE1C-int LTR MaLR 1 1580 0 2582 107 19 0 chr20 45358941 45359307 -21308698 + THE1C LTR MaLR 3 375 0 2001 224 176 54 chr20 45359307 45359558 -21308447 - L1MEc LINE L1 -5028 1913 1372 612 234 7 35 chr20 45359561 45359706 -21308299 - FLAM_C SINE Alu 0 143 3 723 187 16 89 chr20 45359706 45359775 -21308230 - L1MEc LINE L1 -5040 1383 1310 2033 146 0 0 chr20 45359775 45360077 -21307928 - AluSq SINE Alu -11 302 1 723 187 16 89 chr20 45360077 45360264 -21307741 - L1MEc LINE L1 -5113 1310 1146 675 288 26 39 chr20 45360290 45360335 -21307670 - L1MEc LINE L1 -6098 325 281 1316 201 57 50 chr20 45360335 45360634 -21307371 + AluJo SINE Alu 1 301 -11 675 288 26 39 chr20 45360634 45360894 -21307111 - L1MEc LINE L1 -6142 281 24 2123 127 7 0 chr20 45361153 45361444 -21306561 + AluSx SINE Alu 1 293 -19 895 268 126 0 chr20 45361647 45361878 -21306127 + MIR SINE MIR 1 260 -2 321 332 185 14 chr20 45361954 45362165 -21305840 - MIR SINE MIR -3 259 13 199 268 0 85 chr20 45362188 45362270 -21305735 + MIR SINE MIR 122 196 -66 186 292 79 11 chr20 45362333 45362422 -21305583 + L2 LINE L2 2935 3029 -243 332 296 112 54 chr20 45362497 45362582 -21305423 - L2 LINE L2 -601 2713 2634 2885 25 0 0 chr20 45362582 45362897 -21305108 + AluYb8 SINE Alu 1 315 -3 332 296 112 54 chr20 45362897 45363071 -21304934 - L2 LINE L2 -680 2634 2439 25 31 0 0 chr20 45363448 45363480 -21304525 + GC_rich Low_complexity Low_complexity 1 32 0 29 47 0 0 chr20 45363787 45363830 -21304175 + GC_rich Low_complexity Low_complexity 1 43 0 216 217 300 0 chr20 45365240 45365349 -21302656 - MIR SINE MIR -65 143 31 27 92 0 0 chr20 45366633 45366709 -21301296 + AT_rich Low_complexity Low_complexity 1 76 0 589 258 131 18 chr20 45366736 45366957 -21301048 - MIR SINE MIR 0 262 17 467 258 129 27 chr20 45366989 45367175 -21300830 - MIR SINE MIR -8 254 50 282 326 152 14 chr20 45367229 45367367 -21300638 + MIR3 SINE MIR 30 186 -22 195 69 0 0 chr20 45367466 45367495 -21300510 + (TCC)n Simple_repeat Simple_repeat 1 29 0 393 258 167 40 chr20 45368169 45368367 -21299638 - L2 LINE L2 -1 3312 3090 274 261 154 56 chr20 45368642 45368837 -21299168 - MLT1J LTR MaLR -64 447 234 2222 130 0 0 chr20 45368898 45369197 -21298808 - AluSx SINE Alu -13 299 1 867 295 20 26 chr20 45369325 45369627 -21298378 - L2 LINE L2 -897 2417 2118 313 210 62 25 chr20 45371145 45371226 -21296779 - L2 LINE L2 -1 3271 3188 240 270 228 26 chr20 45371608 45371797 -21296208 - MIR SINE MIR -16 246 20 2650 213 72 52 chr20 45372073 45372918 -21295087 + L1ME2 LINE L1 5293 6154 -10 411 261 79 88 chr20 45372951 45373166 -21294839 + L1MC4 LINE L1 7829 8041 -1 21 36 0 0 chr20 45374461 45374489 -21293516 + AT_rich Low_complexity Low_complexity 1 28 0 499 281 45 32 chr20 45374732 45374953 -21293052 - Charlie8 DNA MER1_type -2038 379 156 1011 111 0 0 chr20 45374970 45375096 -21292909 - FLAM_C SINE Alu -17 126 1 374 238 20 0 chr20 45375098 45375199 -21292806 - Charlie8 DNA MER1_type -2269 148 46 243 293 92 92 chr20 45375769 45376148 -21291857 - L2 LINE L2 -32 3240 2862 192 211 58 39 chr20 45377193 45377245 -21290760 + L2 LINE L2 3248 3300 -13 559 323 68 9 chr20 45377253 45377473 -21290532 + MIR SINE MIR 11 243 -19 267 271 96 54 chr20 45378255 45378421 -21289584 + MIR SINE MIR 32 204 -58 182 329 57 0 chr20 45378453 45378523 -21289482 - L2 LINE L2 -52 3220 3147 200 26 0 105 chr20 45379487 45379525 -21288480 + (TTTTTA)n Simple_repeat Simple_repeat 3 36 0 1530 192 58 0 chr20 45379915 45380191 -21287814 - AluJo SINE Alu -12 300 9 530 238 61 99 chr20 45380311 45380397 -21287608 - L1MC5 LINE L1 -365 7596 7508 1726 166 0 52 chr20 45380397 45380524 -21287481 + AluJb SINE Alu 5 137 -175 2221 88 0 0 chr20 45380524 45380807 -21287198 - AluY SINE Alu -3 308 26 1726 166 0 52 chr20 45380807 45380986 -21287019 + AluJb SINE Alu 137 295 -17 530 238 61 99 chr20 45380986 45381000 -21287005 - L1MC5 LINE L1 -453 7508 7495 668 156 52 7 chr20 45381000 45381135 -21286870 - L1MC2 LINE L1 -7 6337 6197 530 238 61 99 chr20 45381135 45381451 -21286554 - L1MC5 LINE L1 -466 7495 7261 323 303 8 59 chr20 45382139 45382258 -21285747 + L1M4 LINE L1 4550 4662 -1484 348 360 148 8 chr20 45382295 45382545 -21285460 - L2 LINE L2 -15 3257 2973 837 34 42 0 chr20 45382573 45382692 -21285313 + (TTTC)n Simple_repeat Simple_repeat 3 126 0 1472 61 0 0 chr20 45382693 45382873 -21285132 - L1PA8 LINE L1 -3 6169 5990 757 211 103 26 chr20 45383427 45383621 -21284384 - MER3 DNA MER1_type 0 209 1 476 250 48 30 chr20 45384051 45384219 -21283786 - MER5A DNA MER1_type -2 187 17 2369 70 0 14 chr20 45384513 45384798 -21283207 + AluSc SINE Alu 1 281 -28 198 0 0 0 chr20 45384798 45384820 -21283185 + (CA)n Simple_repeat Simple_repeat 2 23 0 1121 232 122 28 chr20 45385525 45385879 -21282126 + L2 LINE L2 2191 2577 -737 192 196 22 43 chr20 45385876 45385922 -21282083 + L2 LINE L2 3036 3080 -233 * 554 208 164 1 chr20 45385905 45386054 -21281951 + MER5B DNA MER1_type 8 173 -5 2214 90 11 0 chr20 45386238 45386544 -21281461 + AluSx SINE Alu 1 309 0 233 211 58 0 chr20 45387146 45387198 -21280807 + MIR3 SINE MIR 108 162 -46 324 169 0 0 chr20 45387420 45387479 -21280526 - MER33 DNA MER1_type -2 322 264 940 192 5 21 chr20 45387485 45387678 -21280327 + AluJb SINE Alu 120 309 -3 759 202 67 22 chr20 45387678 45387901 -21280104 - MER33 DNA MER1_type -85 239 7 21 0 0 0 chr20 45388069 45388090 -21279915 + AT_rich Low_complexity Low_complexity 1 21 0 2099 127 13 23 chr20 45388093 45388424 -21279581 - AluSx SINE Alu 0 312 1 662 200 0 0 chr20 45388595 45388741 -21279264 - FLAM_C SINE Alu 0 160 15 285 310 0 11 chr20 45388864 45388951 -21279054 + CT-rich Low_complexity Low_complexity 3 88 0 2155 123 91 0 chr20 45389483 45389833 -21278172 + MSTC LTR MaLR 21 402 -26 277 219 10 104 chr20 45390014 45390110 -21277895 + MLT1H1-int LTR MaLR 1109 1195 -176 1778 178 11 11 chr20 45390204 45390521 -21277484 - AluJb SINE Alu 0 317 1 288 0 0 0 chr20 45390525 45390557 -21277448 + (T)n Simple_repeat Simple_repeat 1 32 0 1759 223 73 25 chr20 45390653 45391003 -21277002 + MLT1H1 LTR MaLR 12 393 -162 180 0 0 0 chr20 45391003 45391023 -21276982 + (CAGCC)n Simple_repeat Simple_repeat 5 24 0 1759 223 73 25 chr20 45391023 45391153 -21276852 + MLT1H1 LTR MaLR 393 515 -40 2181 92 135 65 chr20 45391476 45391819 -21276186 + MSTA LTR MaLR 1 319 -109 2390 63 7 20 chr20 45391819 45392119 -21275886 - AluSp SINE Alu -17 296 1 2181 92 135 65 chr20 45392119 45392131 -21275874 + MSTA LTR MaLR 319 329 -99 2257 120 3 0 chr20 45392131 45392439 -21275566 - AluSp SINE Alu -2 311 3 2181 92 135 65 chr20 45392439 45392482 -21275523 + MSTA LTR MaLR 329 428 0 667 285 131 18 chr20 45392768 45392959 -21275046 - L2 LINE L2 -38 3275 3107 1151 191 19 0 chr20 45392959 45393174 -21274831 - L1PA16 LINE L1 0 6166 5948 667 285 131 18 chr20 45393174 45393372 -21274633 - L2 LINE L2 -206 3107 2842 668 198 148 10 chr20 45393619 45393821 -21274184 - L1ME3A LINE L1 -119 6051 5822 229 319 83 14 chr20 45394066 45394210 -21273795 - MIR SINE MIR -2 260 107 2673 198 31 31 chr20 45394897 45395535 -21272470 + MER4B-int LTR ERV1 3451 4088 -2670 1179 84 95 0 chr20 45395536 45395715 -21272290 + MER4B-int LTR ERV1 4454 4649 -2109 * 5674 95 43 6 chr20 45395704 45396079 -21271926 + MER4B-int LTR ERV1 5421 5780 -978 2428 84 3 0 chr20 45396079 45396375 -21271630 - AluSq SINE Alu -12 301 5 5674 95 43 6 chr20 45396375 45396854 -21271151 + MER4B-int LTR ERV1 5780 6307 -451 492 18 0 0 chr20 45396854 45396911 -21271094 + (TA)n Simple_repeat Simple_repeat 1 57 0 2227 121 33 56 chr20 45396914 45397141 -21270864 + MER4B-int LTR ERV1 6372 6588 -170 2437 89 0 3 chr20 45397141 45397444 -21270561 - AluSq SINE Alu -11 302 1 2227 121 33 56 chr20 45397444 45397612 -21270393 + MER4B-int LTR ERV1 6588 6758 0 1120 119 123 96 chr20 45397612 45397863 -21270142 + MER4B LTR ERV1 1 258 -352 * 1305 116 93 27 chr20 45397848 45398073 -21269932 + MER4E LTR ERV1 527 766 0 208 254 91 0 chr20 45398078 45398133 -21269872 + MER5A DNA MER1_type 50 109 -80 5475 129 36 26 chr20 45398180 45399074 -21268931 - MER4D LTR ERV1 0 903 1 741 219 27 27 chr20 45399077 45399264 -21268741 + MER21B LTR ERV1 491 677 -186 3028 110 138 16 chr20 45399267 45399811 -21268194 + MER4B LTR ERV1 1 610 0 4717 110 2 0 chr20 45399895 45400529 -21267476 - MER41B LTR ERV1 0 635 1 2241 124 0 3 chr20 45400664 45400963 -21267042 + AluSx SINE Alu 1 298 -14 418 177 127 0 chr20 45401022 45401101 -21266904 + MIR SINE MIR 59 147 -115 3416 157 44 68 chr20 45402031 45402739 -21265266 - LTR8 LTR ERV1 0 691 1 1185 238 140 19 chr20 45403074 45403690 -21264315 - L2 LINE L2 0 3313 2603 578 194 75 6 chr20 45404209 45404369 -21263636 + MER96B DNA MER1_type? 9 179 -238 2148 119 27 0 chr20 45404694 45404987 -21263018 - AluSx SINE Alu -11 301 1 208 259 12 74 chr20 45405428 45405509 -21262496 - MIR3 SINE MIR -15 193 118 479 254 8 34 chr20 45405893 45406011 -21261994 + L2 LINE L2 3158 3272 0 238 203 54 14 chr20 45406315 45406389 -21261616 + LTR67 LTR ERVL 473 549 -8 195 42 0 0 chr20 45406554 45406578 -21261427 + (T)n Simple_repeat Simple_repeat 1 24 0 189 121 0 0 chr20 45406694 45406727 -21261278 + (TG)n Simple_repeat Simple_repeat 2 34 0 655 245 80 16 chr20 45406766 45406934 -21261071 - MIR SINE MIR 0 262 79 1422 170 62 104 chr20 45406934 45407339 -21260666 - MLT1B LTR MaLR -2 388 1 655 245 80 16 chr20 45407339 45407358 -21260647 - MIR SINE MIR -183 79 63 302 258 157 78 chr20 45407528 45407796 -21260209 - LTR16C LTR ERVL -134 357 69 236 234 258 78 chr20 45407846 45408013 -21259992 + MIR SINE MIR 66 262 0 470 270 22 22 chr20 45408057 45408220 -21259785 - MIR3 SINE MIR -10 198 36 331 235 25 64 chr20 45408221 45408369 -21259636 - L1MC4 LINE L1 -1339 6983 1948 305 260 0 39 chr20 45408391 45408468 -21259537 - L1MC4 LINE L1 -4358 2068 1995 1982 149 0 0 chr20 45408595 45408883 -21259122 - AluJo SINE Alu -24 288 1 246 177 123 113 chr20 45408945 45408996 -21259009 - Charlie7 DNA MER1_type 0 2612 2563 219 36 0 0 chr20 45408996 45409024 -21258981 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2051 104 32 4 chr20 45409026 45409305 -21258700 - AluSx SINE Alu -25 287 1 246 177 123 113 chr20 45409305 45409453 -21258552 - Charlie7 DNA MER1_type -49 2563 2408 280 422 0 8 chr20 45409535 45409663 -21258342 - L2 LINE L2 -177 3095 2969 223 297 56 112 chr20 45410139 45410261 -21257744 - L3 LINE CR1 -103 1474 1372 1982 152 37 0 chr20 45410261 45410557 -21257448 + AluJb SINE Alu 1 307 -5 223 297 56 112 chr20 45410557 45410683 -21257322 - L3 LINE CR1 -205 1372 1240 285 314 53 48 chr20 45411218 45411304 -21256701 - MIR3 SINE MIR -15 193 107 349 302 59 5 chr20 45411304 45411450 -21256555 + MIR SINE MIR 2 159 -62 2408 185 38 55 chr20 45411450 45412034 -21255971 - MER90 LTR ERV1 0 575 2 1827 157 0 20 chr20 45412034 45412406 -21255599 - AluSx SINE Alu 0 378 13 214 337 21 11 chr20 45412430 45412525 -21255480 + MIR SINE MIR 161 256 -6 205 146 0 42 chr20 45412527 45412575 -21255430 + (TAA)n Simple_repeat Simple_repeat 3 48 0 2249 45 0 0 chr20 45412610 45412907 -21255098 - AluY SINE Alu 0 309 13 388 172 31 0 chr20 45412977 45413041 -21254964 + MIR SINE MIR 82 147 -61 790 151 0 0 chr20 45413045 45413164 -21254841 + AluSq/x SINE Alu 1 119 -193 704 198 101 68 chr20 45413232 45413464 -21254541 + MIR SINE MIR 14 246 -16 671 262 230 26 chr20 45413475 45413646 -21254359 - L2 LINE L2 -23 3290 3155 978 141 0 0 chr20 45413646 45413795 -21254210 + L1PA6 LINE L1 6006 6154 0 671 262 230 26 chr20 45413795 45413932 -21254073 - L2 LINE L2 -158 3155 2919 342 301 34 27 chr20 45413956 45414102 -21253903 - L2 LINE L2 -499 2815 2669 222 37 0 0 chr20 45414657 45414684 -21253321 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 1512 139 31 12 chr20 45414704 45414962 -21253043 - AluJo SINE Alu -5 307 45 492 268 68 45 chr20 45414964 45415184 -21252821 - HAL1 LINE L1 -138 2369 2145 313 301 187 18 chr20 45415328 45415473 -21252532 + MIR SINE MIR 6 125 -137 2114 125 0 7 chr20 45415473 45415776 -21252229 + AluSx SINE Alu 1 301 -11 313 301 187 18 chr20 45415776 45415849 -21252156 + MIR SINE MIR 125 261 -1 195 239 70 28 chr20 45415949 45416020 -21251985 - MIR SINE MIR -116 146 73 906 184 0 0 chr20 45416025 45416183 -21251822 + AluSg/x SINE Alu 138 295 -15 616 297 81 23 chr20 45416414 45416673 -21251332 + L1MEd LINE L1 487 760 -5359 438 137 0 14 chr20 45417329 45417402 -21250603 - AluJ/FLAM SINE Alu -238 74 3 1758 159 12 25 chr20 45417406 45417733 -21250272 + LOR1-int LTR ERV1 1043 1365 -421 * 1790 127 67 6 chr20 45417721 45418052 -21249953 + LOR1-int LTR ERV1 1263 1613 -6507 712 165 6 68 chr20 45418041 45418217 -21249788 + LOR1-int LTR ERV1 3519 3683 -2915 * 503 127 0 0 chr20 45418222 45418301 -21249704 + LOR1-int LTR ERV1 1618 1696 -6424 375 210 80 20 chr20 45418309 45418409 -21249596 - MER50 LTR ERV1 -130 604 499 22 0 0 0 chr20 45418410 45418432 -21249573 + AT_rich Low_complexity Low_complexity 1 22 0 1232 145 0 0 chr20 45418468 45418654 -21249351 - AluSg/x SINE Alu -35 277 92 182 292 0 21 chr20 45418837 45418885 -21249120 - L2 LINE L2 -93 3179 3133 239 77 77 26 chr20 45419071 45419110 -21248895 + MER72 LTR ERV1 640 680 -42 2145 165 47 76 chr20 45419170 45419350 -21248655 + MLT1C LTR MaLR 3 187 -263 3052 120 8 8 chr20 45419350 45419824 -21248181 - L1PB1 LINE L1 0 6151 5678 2145 165 47 76 chr20 45419824 45420120 -21247885 + MLT1C LTR MaLR 187 441 -9 463 271 31 31 chr20 45420163 45420292 -21247713 - MIR SINE MIR -57 151 23 3039 210 15 22 chr20 45420483 45421033 -21246972 - MLT1G LTR MaLR 0 590 43 1663 141 51 90 chr20 45421033 45421423 -21246582 + THE1C LTR MaLR 1 375 0 3039 210 15 22 chr20 45421423 45421466 -21246539 - MLT1G LTR MaLR -547 43 1 2437 212 18 36 chr20 45421623 45422174 -21245831 - MER87 LTR ERV1 0 541 1 788 315 61 34 chr20 45422300 45422723 -21245282 + L2 LINE L2 2590 3021 -292 359 150 0 0 chr20 45423189 45423249 -21244756 - LTR67 LTR ERVL -17 540 481 234 273 0 0 chr20 45423293 45423348 -21244657 + LTR67 LTR ERVL 503 557 0 410 271 47 0 chr20 45424051 45424158 -21243847 + MIR SINE MIR 65 176 -86 1041 140 43 6 chr20 45424355 45424519 -21243486 + MER5A DNA MER1_type 4 173 -16 1642 79 19 0 chr20 45424519 45424734 -21243271 + AluSq SINE Alu 1 219 -94 300 91 0 0 chr20 45424735 45424779 -21243226 + (GGGGA)n Simple_repeat Simple_repeat 5 48 0 247 140 0 0 chr20 45424780 45424830 -21243175 + Alu SINE Alu 251 300 0 204 243 0 0 chr20 45424832 45424869 -21243136 + MER5A DNA MER1_type 152 188 -1 596 197 40 26 chr20 45424869 45425021 -21242984 - Charlie8 DNA MER1_type -2202 215 62 213 344 47 16 chr20 45425084 45425212 -21242793 - MIR SINE MIR -62 200 69 200 328 16 0 chr20 45426339 45426403 -21241602 + L2 LINE L2 3207 3271 -1 241 264 36 45 chr20 45428461 45428571 -21239434 - MIR3 SINE MIR -19 189 81 656 235 84 34 chr20 45429254 45429433 -21238572 + MIR SINE MIR 26 213 -49 32690 113 16 66 chr20 45429588 45436083 -21231922 - L1PA13 LINE L1 0 6163 12 1735 92 89 11 chr20 45436100 45436371 -21231634 - AluSx SINE Alu -18 294 3 630 118 43 4 chr20 45436420 45436525 -21231480 + L1MC/D LINE L1 5663 5768 -402 953 216 60 36 chr20 45436765 45437015 -21230990 + MIR SINE MIR 6 261 -1 185 323 158 0 chr20 45437084 45437211 -21230794 - MIR SINE MIR -82 180 34 214 315 23 39 chr20 45437660 45437790 -21230215 - L2 LINE L2 -213 3059 2932 2012 100 12 47 chr20 45437792 45438111 -21229894 + AluSp SINE Alu 1 308 -5 271 328 156 8 chr20 45438338 45438466 -21229539 + MIR SINE MIR 26 172 -90 189 307 20 50 chr20 45438506 45438607 -21229398 - L2 LINE L2 -2868 446 349 227 314 39 20 chr20 45439127 45439229 -21228776 - MIR SINE MIR -78 184 81 419 273 19 19 chr20 45439646 45439807 -21228198 + CT-rich Low_complexity Low_complexity 1 161 0 845 110 31 8 chr20 45439864 45439991 -21228014 + MER50 LTR ERV1 1 130 -604 1970 117 3 0 chr20 45439991 45440273 -21227732 + AluSx SINE Alu 1 283 -29 21951 125 47 58 chr20 45440287 45444581 -21223424 - MER41-int LTR ERV1 -1699 5719 272 250 175 0 35 chr20 45444582 45444692 -21223313 - Alu SINE Alu 0 353 246 339 106 76 0 chr20 45444693 45444759 -21223246 - MER41-int LTR ERV1 -4680 1266 1203 308 229 171 71 chr20 45444822 45445062 -21222943 + L1M2 LINE L1 1017 1280 -5569 252 298 48 10 chr20 45445228 45445332 -21222673 - L2 LINE L2 -20 3252 3145 2190 49 39 3 chr20 45445420 45445705 -21222300 - AluY SINE Alu -16 295 1 261 0 0 0 chr20 45445711 45445740 -21222265 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 2206 65 11 0 chr20 45445740 45446017 -21221988 - AluSx SINE Alu -32 280 1 1811 138 14 7 chr20 45446017 45446293 -21221712 - MER41B-int LTR ERV1 -5668 278 1 4095 134 9 11 chr20 45446293 45446929 -21221076 - MER41B LTR ERV1 0 635 1 306 270 167 35 chr20 45447504 45447678 -21220327 - MER117 DNA MER1_type 0 197 1 971 188 0 6 chr20 45448082 45448263 -21219742 + FRAM SINE Alu 1 176 0 1123 304 78 13 chr20 45449784 45449861 -21218144 - L2 LINE L2 0 3313 3242 297 0 0 0 chr20 45449861 45449894 -21218111 + (TG)n Simple_repeat Simple_repeat 1 33 0 1123 304 78 13 chr20 45449894 45450477 -21217528 - L2 LINE L2 -71 3242 2597 2233 83 0 3 chr20 45450495 45450796 -21217209 + AluSg SINE Alu 1 300 -10 392 226 32 97 chr20 45450950 45451074 -21216931 - MLT1H LTR MaLR -13 536 421 1581 113 0 13 chr20 45451106 45451336 -21216669 + AluSq SINE Alu 58 284 -29 2346 88 0 0 chr20 45451336 45451642 -21216363 + AluSg SINE Alu 1 306 -4 484 224 118 31 chr20 45451726 45451887 -21216118 - MLT1H LTR MaLR -374 175 1 678 256 54 31 chr20 45451913 45452136 -21215869 - ERVL LTR ERVL -969 4795 4568 541 252 81 111 chr20 45452137 45452534 -21215471 + L2 LINE L2 2929 3313 0 1180 272 38 55 chr20 45452541 45453012 -21214993 - ERVL LTR ERVL -1231 4533 4071 291 245 18 87 chr20 45453831 45454065 -21213940 - LTR38B LTR ERV1 0 610 388 234 279 0 29 chr20 45454138 45454206 -21213799 - LTR38 LTR ERV1 -362 194 129 493 217 0 50 chr20 45454313 45454433 -21213572 - LTR38B LTR ERV1 -495 115 2 206 0 69 0 chr20 45454886 45454915 -21213090 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2227 85 10 0 chr20 45455032 45455338 -21212667 - AluSx SINE Alu -2 310 2 1806 144 48 0 chr20 45455813 45456105 -21211900 + AluJb SINE Alu 1 306 -6 1106 171 56 49 chr20 45456451 45456487 -21211518 - L1MC4 LINE L1 -1 8041 8007 1733 174 3 7 chr20 45456487 45456792 -21211213 + AluJo SINE Alu 1 304 -8 1106 171 56 49 chr20 45456792 45456899 -21211106 - L1MC4 LINE L1 -35 8007 7902 189 107 0 0 chr20 45456899 45456927 -21211078 + (CA)n Simple_repeat Simple_repeat 2 29 0 1106 171 56 49 chr20 45456927 45457087 -21210918 - L1MC4 LINE L1 -140 7902 7735 3276 240 49 65 chr20 45457088 45458050 -21209955 - MER45C DNA AcHobo 0 953 8 2286 175 76 94 chr20 45458051 45458646 -21209359 - L1MC4 LINE L1 -300 7742 7159 794 170 14 0 chr20 45458651 45458792 -21209213 - FLAM_C SINE Alu 0 143 1 209 189 0 0 chr20 45459043 45459080 -21208925 + CT-rich Low_complexity Low_complexity 2 38 0 227 291 87 48 chr20 45459194 45459297 -21208708 - L2 LINE L2 -10 3303 3197 820 319 20 4 chr20 45459421 45459672 -21208333 + MIR SINE MIR 6 260 -2 325 286 107 36 chr20 45459686 45459966 -21208039 + L1ME4a LINE L1 5579 5878 -243 1754 145 28 7 chr20 45460637 45460926 -21207079 - AluSx SINE Alu -17 295 1 937 234 184 45 chr20 45460980 45461146 -21206859 + MLT1E LTR MaLR 2 144 -449 1238 126 10 5 chr20 45461146 45461352 -21206653 + L1MA4 LINE L1 6093 6299 -1 2111 105 0 14 chr20 45461354 45461649 -21206356 + AluSx SINE Alu 1 291 -21 937 234 184 45 chr20 45461649 45461897 -21206108 + MLT1E LTR MaLR 144 477 -116 349 232 37 0 chr20 45462162 45462244 -21205761 + L1ME4a LINE L1 5797 5881 -240 207 100 0 0 chr20 45462296 45462326 -21205679 + (TC)n Simple_repeat Simple_repeat 2 31 0 391 185 17 52 chr20 45462326 45462499 -21205506 + (TA)n Simple_repeat Simple_repeat 2 168 0 2531 70 3 0 chr20 45463552 45463853 -21204152 - AluSp SINE Alu -11 302 1 2983 149 70 6 chr20 45464287 45464804 -21203201 - MER44D DNA MER2_type 0 605 1 522 271 95 33 chr20 45464810 45465020 -21202985 - L2 LINE L2 -527 2787 2565 241 212 53 76 chr20 45465498 45465630 -21202375 + LTR31 LTR ERV1 482 610 -9 1875 174 10 3 chr20 45466069 45466081 -21201924 - AluSq SINE Alu 0 313 303 608 13 26 0 chr20 45466081 45466157 -21201848 + (TTCCC)n Simple_repeat Simple_repeat 3 80 0 1875 174 10 3 chr20 45466157 45466455 -21201550 - AluSq SINE Alu -10 303 1 289 237 13 13 chr20 45466835 45466911 -21201094 + MER57-int LTR ERV1 6582 6657 -880 440 273 36 59 chr20 45467141 45467394 -21200611 + MER57-int LTR ERV1 7873 8119 -1 335 313 15 8 chr20 45468506 45468637 -21199368 + MIR SINE MIR 3 134 -128 293 246 8 12 chr20 45468639 45468771 -21199234 - MER5A DNA MER1_type 0 189 9 2228 91 0 42 chr20 45469300 45469609 -21198396 - AluSc SINE Alu -13 296 1 198 0 0 0 chr20 45469615 45469637 -21198368 + (T)n Simple_repeat Simple_repeat 1 22 0 213 39 0 0 chr20 45470030 45470056 -21197949 + (CA)n Simple_repeat Simple_repeat 1 26 0 436 314 26 0 chr20 45470546 45470699 -21197306 + MIR3 SINE MIR 50 206 -2 291 273 45 85 chr20 45470763 45470939 -21197066 + MIR SINE MIR 20 188 -74 225 323 94 0 chr20 45471020 45471116 -21196889 + L2 LINE L2 3199 3303 -10 266 306 41 10 chr20 45471253 45471351 -21196654 - MIR SINE MIR -131 131 31 439 240 4 128 chr20 45471766 45472016 -21195989 - MIR SINE MIR -32 230 12 451 185 217 57 chr20 45472040 45472197 -21195808 - MER5A DNA MER1_type -6 183 2 249 305 13 65 chr20 45472261 45472415 -21195590 + HAL1b LINE L1 1186 1331 -17 434 261 111 20 chr20 45472672 45472871 -21195134 + L2 LINE L2 3093 3309 -4 236 333 124 15 chr20 45473337 45473538 -21194467 - MIR SINE MIR -12 250 28 252 297 0 0 chr20 45473545 45473609 -21194396 - L2 LINE L2 0 3272 3209 2580 123 43 20 chr20 45473954 45473979 -21194026 - L1MA8 LINE L1 -108 6183 6160 319 64 0 103 chr20 45473979 45474012 -21193993 - L1MA7 LINE L1 -1 6290 6268 2276 148 8 0 chr20 45474012 45474371 -21193634 + MER47A DNA MER2_type 2 363 -3 319 64 0 103 chr20 45474371 45474415 -21193590 - L1MA7 LINE L1 -23 6268 6221 2580 123 43 20 chr20 45474415 45474829 -21193176 - L1MA8 LINE L1 -131 6160 5734 342 257 9 53 chr20 45474845 45474958 -21193047 + MIR SINE MIR 86 193 -69 758 184 172 0 chr20 45475581 45475755 -21192250 + MER20 DNA MER1_type 16 219 0 26 0 0 0 chr20 45475779 45475805 -21192200 + AT_rich Low_complexity Low_complexity 1 26 0 543 196 138 29 chr20 45476182 45476320 -21191685 - L1PB4 LINE L1 0 6156 6004 2277 96 0 26 chr20 45476333 45476646 -21191359 - AluSx SINE Alu -7 305 1 279 215 54 43 chr20 45476843 45476936 -21191069 - L1MEc LINE L1 -4401 1995 1902 231 204 0 0 chr20 45476960 45477014 -21190991 + (CA)n Simple_repeat Simple_repeat 1 54 0 465 214 139 29 chr20 45477014 45477187 -21190818 - L1MEc LINE L1 -4577 1819 1628 385 160 40 112 chr20 45477185 45477310 -21190695 - L1MD1 LINE L1 0 6242 6127 * 1990 217 6 82 chr20 45477312 45477838 -21190167 - MLT2B1 LTR ERVL -34 486 1 6695 143 21 13 chr20 45477838 45479178 -21188827 - ERVL-B1 LTR ERVL -7 5757 4353 248 143 18 36 chr20 45479244 45479300 -21188705 + MER5B DNA MER1_type 117 171 -7 841 320 4 14 chr20 45479328 45479603 -21188402 + ERVL LTR ERVL 4832 5103 -661 1762 167 131 81 chr20 45479627 45479651 -21188354 - MLT2B1 LTR ERVL -56 464 443 423 0 0 0 chr20 45479651 45479698 -21188307 + (TG)n Simple_repeat Simple_repeat 2 48 0 1762 167 131 81 chr20 45479698 45480115 -21187890 - MLT2B1 LTR ERVL -77 443 1 642 337 38 0 chr20 45480117 45480381 -21187624 + ERVL LTR ERVL 5111 5384 -380 604 310 125 16 chr20 45480586 45480905 -21187100 + LTR33 LTR ERVL 6 359 -162 270 242 194 48 chr20 45480924 45481089 -21186916 - L2 LINE L2 -1 3312 3124 187 241 37 0 chr20 45481676 45481730 -21186275 - MER5A DNA MER1_type 0 189 134 234 154 0 0 chr20 45482685 45482724 -21185281 + LTR33A LTR ERVL 439 477 -46 332 250 46 72 chr20 45482911 45483063 -21184942 + MIR3 SINE MIR 45 192 -16 275 309 17 88 chr20 45483549 45483730 -21184275 - MIR3 SINE MIR -21 187 20 2338 100 0 3 chr20 45484197 45484496 -21183509 + AluSg SINE Alu 1 298 -12 1866 173 5 16 chr20 45484540 45484911 -21183094 - L1MA9 LINE L1 0 6312 5946 663 140 27 198 chr20 45484911 45485133 -21182872 + L1MA8 LINE L1 6107 6290 -1 2646 176 30 84 chr20 45485133 45485300 -21182705 - L1MA9 LINE L1 -372 5940 5765 1889 147 0 11 chr20 45485300 45485630 -21182375 - AluJo SINE Alu 0 327 1 2646 176 30 84 chr20 45485630 45485667 -21182338 - L1MA9 LINE L1 -547 5765 5728 2297 35 0 24 chr20 45485667 45485954 -21182051 - L1PA4 LINE L1 0 6155 5876 2646 176 30 84 chr20 45485954 45486713 -21181292 - L1MA9 LINE L1 -584 5728 5031 1995 125 29 56 chr20 45486726 45487103 -21180902 - L1MA9 LINE L1 -5 6307 5941 207 0 0 0 chr20 45487105 45487128 -21180877 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 607 191 0 17 chr20 45487128 45487243 -21180762 - FLAM_C SINE Alu -29 114 2 972 125 3 248 chr20 45487246 45487613 -21180392 - L1MA9 LINE L1 -342 5949 5673 3826 186 47 10 chr20 45487616 45488403 -21179602 - L1MA9 LINE L1 -1101 5045 4230 1957 131 44 3 chr20 45488678 45488975 -21179030 - AluSq SINE Alu -4 309 1 1156 268 95 46 chr20 45488985 45489489 -21178516 - MLT1H1 LTR MaLR -3 552 24 203 247 14 55 chr20 45489525 45489598 -21178407 + CT-rich Low_complexity Low_complexity 4 73 0 3209 251 36 43 chr20 45489695 45490266 -21177739 + MER69B DNA AcHobo 1 575 -1951 2183 123 0 3 chr20 45490266 45490559 -21177446 - AluSx SINE Alu -20 292 1 3209 251 36 43 chr20 45490559 45491080 -21176925 + MER69B DNA AcHobo 575 1158 -1368 2349 95 23 0 chr20 45491080 45491386 -21176619 - AluSp SINE Alu 0 313 1 3209 251 36 43 chr20 45491386 45491450 -21176555 + MER69B DNA AcHobo 1158 1221 -5 527 268 0 36 chr20 45492115 45492253 -21175752 - MER94 DNA DNA 0 134 2 294 277 22 18 chr20 45492915 45493040 -21174965 + MIR SINE MIR 63 145 -63 494 238 170 0 chr20 45493906 45494053 -21173952 - MIR SINE MIR -44 218 47 528 187 24 32 chr20 45494510 45494633 -21173372 - LTR24 LTR ERV1 0 467 316 249 335 125 15 chr20 45494633 45494833 -21173172 + L2 LINE L2 2843 3064 -208 281 318 20 34 chr20 45495136 45495284 -21172721 - MIR3 SINE MIR -27 181 36 180 146 73 73 chr20 45495941 45495996 -21172009 + MIR SINE MIR 82 136 -72 652 256 11 11 chr20 45496123 45496299 -21171706 - MIR SINE MIR -75 187 12 208 204 43 43 chr20 45497300 45497393 -21170612 + (TCTCTG)n Simple_repeat Simple_repeat 3 95 0 236 0 0 0 chr20 45497757 45497784 -21170221 - L1M4 LINE L1 -358 5826 5800 344 356 73 31 chr20 45497786 45497977 -21170028 + LTR16C LTR ERVL 55 253 -238 6417 77 48 1 chr20 45497999 45498869 -21169136 + L1PA10 LINE L1 5254 6164 -4 629 252 78 19 chr20 45498896 45499102 -21168903 + LTR16C LTR ERVL 274 491 0 2430 156 0 11 chr20 45500503 45500918 -21167087 + MLT1C LTR MaLR 59 467 0 256 323 94 36 chr20 45501010 45501286 -21166719 + L2 LINE L2 2561 2852 -462 368 332 81 22 chr20 45501762 45501985 -21166020 - MIR SINE MIR -3 259 24 239 340 28 7 chr20 45502370 45502511 -21165494 + L2 LINE L2 2921 3064 -208 206 121 0 0 chr20 45502543 45502576 -21165429 + L2 LINE L2 3280 3312 -1 1034 163 84 0 chr20 45503471 45503673 -21164332 - MER20 DNA MER1_type 0 219 1 217 292 124 0 chr20 45503816 45503929 -21164076 + MIR SINE MIR 108 234 -28 879 244 60 0 chr20 45503930 45504147 -21163858 - MIR SINE MIR -1 261 32 1847 172 13 0 chr20 45506015 45506422 -21161583 - AluSx SINE Alu 0 411 1 403 279 22 7 chr20 45506520 45506656 -21161349 - MIR3 SINE MIR -14 194 57 574 93 0 0 chr20 45506834 45506909 -21161096 - Alu SINE Alu -13 296 222 367 335 11 11 chr20 45507534 45507710 -21160295 + (TGGG)n Simple_repeat Simple_repeat 3 178 0 402 288 103 60 chr20 45508192 45508813 -21159192 + L1M4 LINE L1 3330 4002 -2144 2194 104 47 3 chr20 45508813 45509112 -21158893 + AluSq SINE Alu 1 312 -1 402 288 103 60 chr20 45509112 45509369 -21158636 + L1M4 LINE L1 4002 4246 -1900 276 319 58 22 chr20 45509898 45510036 -21157969 - MIR3 SINE MIR -3 205 63 187 125 0 0 chr20 45510984 45511016 -21156989 + MIR SINE MIR 122 153 -109 1314 294 59 23 chr20 45511036 45511469 -21156536 - L2 LINE L2 -515 2799 2338 995 159 61 156 chr20 45511469 45511795 -21156210 - AluJb SINE Alu -7 295 1 1314 294 59 23 chr20 45511795 45511935 -21156070 - L2 LINE L2 -976 2338 2205 313 304 45 0 chr20 45512256 45512368 -21155637 + MIR SINE MIR 50 166 -96 257 333 129 15 chr20 45512459 45512660 -21155345 - MIR SINE MIR -12 250 27 662 338 22 0 chr20 45512901 45513123 -21154882 - MIR SINE MIR -35 227 1 232 194 28 111 chr20 45513466 45513538 -21154467 + MIR SINE MIR 42 107 -101 8764 101 6 27 chr20 45513647 45514880 -21153125 + HSMAR1 DNA Mariner 1 1208 -79 2168 109 0 0 chr20 45514880 45515200 -21152805 - AluSx SINE Alu 0 320 1 8764 101 6 27 chr20 45515200 45515272 -21152733 + HSMAR1 DNA Mariner 1208 1280 -7 1562 242 12 19 chr20 45515318 45515853 -21152152 + MER90 LTR ERV1 6 614 0 216 135 0 0 chr20 45515865 45515902 -21152103 + (TGAA)n Simple_repeat Simple_repeat 1 37 0 450 315 55 16 chr20 45516946 45517154 -21150851 + MIR SINE MIR 15 231 -31 198 0 0 0 chr20 45517172 45517194 -21150811 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 764 171 0 0 chr20 45517223 45517340 -21150665 - 5S rRNA rRNA 0 121 5 1439 220 104 56 chr20 45517387 45517905 -21150100 + MLT1E3 LTR MaLR 1 543 -81 260 320 143 20 chr20 45518023 45518170 -21149835 - MIR3 SINE MIR 0 208 44 213 301 98 77 chr20 45518288 45518471 -21149534 - MER5A DNA MER1_type -2 187 1 262 330 87 47 chr20 45518656 45519172 -21148833 + L2 LINE L2 2121 2657 -657 330 26 0 0 chr20 45519204 45519243 -21148762 + (TG)n Simple_repeat Simple_repeat 2 40 0 281 322 58 8 chr20 45519731 45519852 -21148153 - MIR3 SINE MIR -7 201 75 298 190 8 41 chr20 45520731 45520825 -21147180 + MIR SINE MIR 107 195 -67 545 315 95 0 chr20 45520852 45521052 -21146953 + MIR SINE MIR 13 231 -31 711 122 0 0 chr20 45521416 45521539 -21146466 - MER53 DNA DNA -64 125 3 683 138 0 0 chr20 45521761 45521855 -21146150 + AluJ/FLAM SINE Alu 3 96 -216 2428 63 0 13 chr20 45521857 45522159 -21145846 + AluY SINE Alu 1 298 -13 847 219 0 0 chr20 45522160 45522306 -21145699 + AluJb SINE Alu 134 279 -33 749 139 7 34 chr20 45522307 45522602 -21145403 + GA-rich Low_complexity Low_complexity 1 287 0 368 310 0 84 chr20 45522626 45522781 -21145224 + MIR3 SINE MIR 19 160 -48 521 291 102 39 chr20 45522789 45523074 -21144931 + Charlie2b DNA MER1_type 9 311 -2551 382 238 29 0 chr20 45523072 45523177 -21144828 + Charlie2b DNA MER1_type 555 662 -2120 * 832 189 102 142 chr20 45523247 45523797 -21144208 + Charlie2a DNA MER1_type 1467 1994 -868 21 0 0 0 chr20 45523801 45523822 -21144183 + AT_rich Low_complexity Low_complexity 1 21 0 2291 119 0 3 chr20 45523847 45524157 -21143848 + AluSx SINE Alu 1 309 -3 1162 212 79 36 chr20 45524270 45524600 -21143405 + MER2 DNA MER2_type 1 344 0 992 181 0 11 chr20 45525290 45525467 -21142538 - FRAM SINE Alu -9 167 1 234 222 69 0 chr20 45526706 45526778 -21141227 + Charlie2a DNA MER1_type 1981 2057 -805 298 233 48 10 chr20 45526931 45527034 -21140971 + Charlie2a DNA MER1_type 2356 2462 -400 1124 127 0 0 chr20 45527042 45527223 -21140782 - L1P LINE L1 -1080 5066 4886 3207 82 7 4 chr20 45527223 45527673 -21140332 + L1PA13 LINE L1 5713 6163 0 721 208 54 17 chr20 45527678 45527919 -21140086 + Charlie2a DNA MER1_type 2470 2719 -143 1550 209 50 31 chr20 45527925 45528346 -21139659 - L1ME1 LINE L1 -298 5868 5440 5383 140 24 46 chr20 45528815 45529586 -21138419 - L1MA7 LINE L1 -1 6290 5503 2495 60 10 0 chr20 45529586 45529888 -21138117 + AluY SINE Alu 1 305 -6 5383 140 24 46 chr20 45529888 45530054 -21137951 - L1MA7 LINE L1 -788 5503 5335 246 105 0 0 chr20 45530054 45530092 -21137913 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 2066 116 0 0 chr20 45530099 45530374 -21137631 - AluSx SINE Alu -37 275 1 5383 140 24 46 chr20 45530374 45530773 -21137232 - L1MA7 LINE L1 -962 5329 4980 2491 105 41 5 chr20 45530773 45531162 -21136843 - L1PB3 LINE L1 -1 6153 5751 5383 140 24 46 chr20 45531162 45531545 -21136460 - L1MA7 LINE L1 -1311 4980 4590 6055 153 20 26 chr20 45531551 45531980 -21136025 + L1 LINE L1 3361 3791 -2355 1960 159 0 10 chr20 45531980 45532282 -21135723 + AluSx SINE Alu 1 299 -13 6055 153 20 26 chr20 45532282 45533070 -21134935 + L1 LINE L1 3791 4571 -1575 337 295 57 40 chr20 45533609 45533867 -21134138 - L1M4 LINE L1 -3521 2625 2358 1814 161 7 7 chr20 45533867 45534165 -21133840 - AluSx SINE Alu -14 298 1 337 295 57 40 chr20 45534165 45534259 -21133746 - L1M4 LINE L1 -3788 2358 2267 2248 204 22 9 chr20 45534410 45534872 -21133133 - MER82 DNA MER2_type -3 650 183 2292 96 0 3 chr20 45534872 45535165 -21132840 - AluSc SINE Alu -17 292 1 2190 123 3 0 chr20 45535193 45535503 -21132502 + AluSx SINE Alu 1 311 -1 820 165 100 12 chr20 45535627 45535797 -21132208 - MER82 DNA MER2_type -468 185 1 1022 71 0 0 chr20 45536369 45536495 -21131510 + AluSg/x SINE Alu 76 201 -109 588 241 148 0 chr20 45537406 45537622 -21130383 - L1ME3A LINE L1 -223 5930 5683 328 58 135 0 chr20 45537637 45537689 -21130316 + L1PA8 LINE L1 6107 6165 -7 254 167 51 0 chr20 45537694 45537772 -21130233 + Charlie1 DNA MER1_type 2548 2629 -132 837 272 42 33 chr20 45537812 45538242 -21129763 - L1ME3A LINE L1 -447 5698 5265 426 327 86 92 chr20 45538446 45538787 -21129218 - L1ME3A LINE L1 -5317 802 463 2297 94 0 7 chr20 45538787 45539084 -21128921 - AluSg SINE Alu -15 295 1 426 327 86 92 chr20 45539084 45539186 -21128819 - L1ME3A LINE L1 -5656 463 362 307 327 35 35 chr20 45539236 45539493 -21128512 - L1ME3A LINE L1 -5794 325 69 746 115 85 24 chr20 45540032 45540197 -21127808 - L1MA7 LINE L1 -4 6287 6113 487 301 134 16 chr20 45540207 45540513 -21127492 - L1M4 LINE L1 -768 5378 5037 3381 204 240 32 chr20 45540546 45541710 -21126295 + L1MDa LINE L1 16 1421 -5119 2847 81 95 2 chr20 45541712 45542122 -21125883 - LTR7 LTR ERV1 -2 448 1 2099 99 67 24 chr20 45542122 45542496 -21125509 - HERVH LTR ERV1 0 7713 7324 793 118 34 0 chr20 45542496 45542615 -21125390 - HERVH LTR ERV1 -1894 5819 5697 * 3733 110 0 2 chr20 45542608 45543153 -21124852 - HERVH LTR ERV1 -2682 5031 4488 5495 99 11 2 chr20 45543155 45544002 -21124003 - HERVH LTR ERV1 -3720 3993 3140 * 9818 102 13 30 chr20 45543981 45545609 -21122396 - HERVH LTR ERV1 -4718 2995 1395 243 0 0 0 chr20 45546375 45546402 -21121603 + (TTG)n Simple_repeat Simple_repeat 1 27 0 197 295 42 42 chr20 45546499 45546594 -21121411 - MIR SINE MIR -74 188 94 2228 240 76 21 chr20 45547918 45548494 -21119511 - L1ME3 LINE L1 -62 6169 5626 2484 64 0 0 chr20 45548494 45548789 -21119216 - AluY SINE Alu -16 295 1 2228 240 76 21 chr20 45548789 45549255 -21118750 - L1ME3 LINE L1 -605 5626 5070 919 246 54 44 chr20 45549335 45549888 -21118117 - L1ME3 LINE L1 -3605 2610 2095 1089 216 14 0 chr20 45550092 45550305 -21117700 - MER20 DNA MER1_type -1 218 3 558 292 69 38 chr20 45550308 45550403 -21117602 - L1ME3 LINE L1 -4580 1816 1725 2239 124 13 0 chr20 45550403 45550710 -21117295 - AluSx SINE Alu -1 311 1 558 292 69 38 chr20 45550710 45551396 -21116609 - L1ME3 LINE L1 -4671 1725 1011 5264 210 34 48 chr20 45551403 45553181 -21114824 - L1P3 LINE L1 -3902 2559 794 1977 121 0 0 chr20 45553204 45553469 -21114536 + AluSx SINE Alu 31 295 -17 2267 120 3 0 chr20 45554558 45554867 -21113138 - AluSx SINE Alu -2 310 1 1859 136 0 0 chr20 45556538 45556795 -21111210 - AluSx SINE Alu -18 294 38 860 328 22 25 chr20 45557242 45557562 -21110443 + MER115 DNA AcHobo 56 374 -319 385 215 30 7 chr20 45557606 45557741 -21110264 - L1ME4a LINE L1 0 6121 5984 324 119 0 0 chr20 45557768 45557827 -21110178 + (TG)n Simple_repeat Simple_repeat 1 59 0 378 91 0 0 chr20 45558124 45558179 -21109826 + (TC)n Simple_repeat Simple_repeat 2 56 0 1155 117 11 0 chr20 45558935 45559114 -21108891 - Tigger1 DNA MER2_type -2237 181 1 432 253 33 13 chr20 45559124 45559274 -21108731 - L1M4 LINE L1 -3516 2630 2478 24 53 0 0 chr20 45559308 45559346 -21108659 + AT_rich Low_complexity Low_complexity 1 38 0 9442 207 79 36 chr20 45559346 45560202 -21107803 - L1MA9 LINE L1 -40 6508 5691 405 0 0 0 chr20 45560202 45560247 -21107758 + (TG)n Simple_repeat Simple_repeat 1 45 0 9442 207 79 36 chr20 45560247 45562458 -21105547 - L1MA9 LINE L1 -857 5691 3174 2433 78 0 0 chr20 45562458 45562753 -21105252 - AluY SINE Alu -16 295 1 9442 207 79 36 chr20 45562753 45563952 -21104053 - L1MA9 LINE L1 -3374 3174 2029 1414 251 28 38 chr20 45563966 45564115 -21103890 - L1MA9 LINE L1 -4407 1975 1826 2057 153 0 10 chr20 45564115 45564428 -21103577 - AluSx SINE Alu -2 310 1 1414 251 28 38 chr20 45564428 45564758 -21103247 - L1MA9 LINE L1 -4556 1826 1420 1140 293 41 0 chr20 45564832 45565146 -21102859 + MLT1J2 LTR MaLR 6 332 -118 2205 117 7 3 chr20 45566659 45566968 -21101037 - AluSg SINE Alu 0 310 1 302 243 84 9 chr20 45567918 45568025 -21099980 - L1ME4a LINE L1 -7 6114 6000 302 358 50 0 chr20 45569094 45569312 -21098693 - L1ME LINE L1 -386 5735 5507 630 324 29 29 chr20 45569386 45569627 -21098378 + MIR SINE MIR 20 260 -2 496 212 108 104 chr20 45569769 45569981 -21098024 - L2 LINE L2 -1 3312 3100 387 326 29 50 chr20 45570045 45570287 -21097718 + L1M4 LINE L1 3952 4188 -1958 575 172 205 0 chr20 45570508 45570630 -21097375 - MER3 DNA MER1_type -1 208 62 279 167 0 0 chr20 45570748 45570790 -21097215 - MER3 DNA MER1_type -167 42 1 180 0 0 0 chr20 45571588 45571608 -21096397 + (TTTC)n Simple_repeat Simple_repeat 1 20 0 293 303 71 39 chr20 45571856 45572011 -21095994 + MIR SINE MIR 11 170 -92 729 172 45 8 chr20 45572948 45573082 -21094923 - Tigger1 DNA MER2_type 0 2418 2280 12040 104 43 155 chr20 45573277 45574642 -21093363 - Tigger1 DNA MER2_type -105 2313 796 2141 120 0 10 chr20 45574642 45574943 -21093062 + AluSg SINE Alu 1 298 -12 12040 104 43 155 chr20 45574943 45574994 -21093011 - Tigger1 DNA MER2_type -1622 796 741 1119 203 149 15 chr20 45574994 45575255 -21092750 - AluJo SINE Alu -5 297 2 12040 104 43 155 chr20 45575255 45576443 -21091562 - Tigger1 DNA MER2_type -1677 741 1 848 255 37 50 chr20 45576872 45577210 -21090795 + L1MEc LINE L1 1599 1933 -4463 2236 120 0 3 chr20 45577210 45577518 -21090487 + AluSx SINE Alu 1 307 -5 848 255 37 50 chr20 45577518 45577556 -21090449 + L1MEc LINE L1 1933 1970 -4426 1921 140 32 0 chr20 45577786 45578071 -21089934 + AluSx SINE Alu 1 294 -18 317 329 25 54 chr20 45578106 45578346 -21089659 - L1MDa LINE L1 -3660 2880 2648 264 214 59 102 chr20 45578356 45578543 -21089462 - L1MDa LINE L1 -3919 2621 2443 3295 189 7 21 chr20 45578875 45579445 -21088560 + MER68 LTR ERV1 1 562 0 386 320 122 30 chr20 45579480 45579955 -21088050 - HAL1 LINE L1 -769 1738 1220 483 210 49 31 chr20 45580052 45580214 -21087791 - L1MC4 LINE L1 -140 7902 7738 2129 99 46 0 chr20 45580825 45581107 -21086898 + AluSq SINE Alu 1 295 -18 10455 149 13 34 chr20 45581108 45581380 -21086625 - L1MA5A LINE L1 -4 6293 6017 2260 96 0 3 chr20 45581380 45581673 -21086332 + AluSg SINE Alu 3 294 -16 10455 149 13 34 chr20 45581673 45582475 -21085530 - L1MA5A LINE L1 -280 6017 5200 1960 145 38 41 chr20 45582475 45582840 -21085165 - THE1B LTR MaLR 0 364 1 10455 149 13 34 chr20 45582840 45583272 -21084733 - L1MA5A LINE L1 -1097 5200 4761 2275 117 0 16 chr20 45583272 45583589 -21084416 - AluSq SINE Alu -1 312 1 10455 149 13 34 chr20 45583589 45585058 -21082947 - L1MA5A LINE L1 -1536 4761 3380 657 181 90 42 chr20 45585061 45585205 -21082800 - MER21B LTR ERV1 -385 478 328 391 300 44 15 chr20 45585246 45585516 -21082489 - L1M4 LINE L1 -3307 2839 2562 395 322 86 41 chr20 45585605 45585872 -21082133 - MLT1J2 LTR MaLR -23 427 149 387 160 40 0 chr20 45586121 45586196 -21081809 - MER21A LTR ERV1 -369 562 485 237 294 0 0 chr20 45586563 45586631 -21081374 + (TATATG)n Simple_repeat Simple_repeat 1 68 0 21 0 0 0 chr20 45586691 45586712 -21081293 + AT_rich Low_complexity Low_complexity 1 21 0 12107 120 17 34 chr20 45590028 45590211 -21077794 + Tigger1 DNA MER2_type 1 186 -2232 2129 121 7 0 chr20 45590211 45590501 -21077504 + AluSq SINE Alu 2 293 -20 12107 120 17 34 chr20 45590501 45592144 -21075861 + Tigger1 DNA MER2_type 186 1795 -623 1342 196 0 84 chr20 45592144 45592466 -21075539 - AluJo SINE Alu -17 295 1 12107 120 17 34 chr20 45592466 45592550 -21075455 + Tigger1 DNA MER2_type 1795 1879 -539 878 116 0 23 chr20 45592550 45592679 -21075326 + FRAM SINE Alu 33 158 -18 2950 139 88 2 chr20 45592714 45593216 -21074789 + Tigger1 DNA MER2_type 1874 2418 0 2377 105 0 0 chr20 45593235 45593541 -21074464 + AluSx SINE Alu 1 306 -6 7096 188 50 23 chr20 45594718 45596721 -21071284 - L1MA8 LINE L1 0 7251 5304 2315 67 40 7 chr20 45596721 45597021 -21070984 - AluY SINE Alu -1 310 1 7096 188 50 23 chr20 45597021 45597469 -21070536 - L1MA8 LINE L1 -1947 5304 4679 2385 155 68 10 chr20 45597469 45597868 -21070137 - MSTB LTR MaLR -2 424 3 7096 188 50 23 chr20 45597868 45597926 -21070079 - L1MA8 LINE L1 -2572 4679 4624 6733 208 83 47 chr20 45598860 45600690 -21067315 - L1MA8 LINE L1 -2447 4659 2896 1676 145 57 11 chr20 45600690 45600972 -21067033 + AluSx SINE Alu 5 299 -13 6733 208 83 47 chr20 45600972 45601822 -21066183 - L1MA8 LINE L1 -4210 2896 2078 1776 135 21 31 chr20 45601822 45602111 -21065894 - AluJb SINE Alu -25 287 2 6733 208 83 47 chr20 45602111 45602487 -21065518 - L1MA8 LINE L1 -5028 2078 1717 9563 24 1 236 chr20 45602487 45604299 -21063706 - SVA Other Other 0 1386 1 6733 208 83 47 chr20 45604299 45605647 -21062358 - L1MA8 LINE L1 -5389 1717 389 538 239 14 7 chr20 45605649 45605791 -21062214 - L1MC4a LINE L1 -1288 6520 6378 270 73 0 0 chr20 45607715 45607756 -21060249 + (GA)n Simple_repeat Simple_repeat 2 42 0 2028 76 8 8 chr20 45608379 45608642 -21059363 - L1PA14 LINE L1 -2 6159 5897 244 218 36 0 chr20 45608669 45608724 -21059281 - MIR SINE MIR -9 253 197 665 177 9 9 chr20 45608725 45608838 -21059167 + MER47A DNA MER2_type 2 114 -252 331 273 0 0 chr20 45608861 45608949 -21059056 - L1ME LINE L1 -335 5827 5740 42948 53 5 1 chr20 45608949 45615061 -21052944 + L1PA4 LINE L1 18 6152 -3 932 91 0 8 chr20 45615196 45615328 -21052677 + MER47A DNA MER2_type 113 243 -123 24 53 0 0 chr20 45615439 45615477 -21052528 + AT_rich Low_complexity Low_complexity 1 38 0 1406 202 9 50 chr20 45615497 45615838 -21052167 - L1MA10 LINE L1 -2 6332 6006 * 1669 205 13 3 chr20 45615835 45616220 -21051785 - L1 LINE L1 -2660 3486 3098 * 7029 76 9 1 chr20 45616190 45617525 -21050480 - L1PA7 LINE L1 -1 6153 4807 1411 230 26 13 chr20 45617500 45617882 -21050123 - L1 LINE L1 -3014 3132 2746 * 39683 75 8 8 chr20 45617882 45624037 -21043968 - L1PA3 LINE L1 0 6155 1 701 244 15 32 chr20 45624032 45624370 -21043635 - L1MC4 LINE L1 -201 7841 7400 * 608 257 20 7 chr20 45625160 45625312 -21042693 + MIR SINE MIR 88 241 -21 618 279 70 0 chr20 45625396 45625568 -21042437 - MIR SINE MIR -50 212 29 27 0 0 0 chr20 45626662 45626689 -21041316 + AT_rich Low_complexity Low_complexity 1 27 0 200 308 0 0 chr20 45626689 45626741 -21041264 + MIR SINE MIR 62 113 -95 1063 159 95 0 chr20 45626778 45626967 -21041038 - Tigger1 DNA MER2_type 0 2418 2212 9948 204 38 44 chr20 45627026 45630074 -21037931 + L1MB4 LINE L1 2873 5905 -275 4118 137 24 8 chr20 45629677 45630333 -21037672 + L1PA15 LINE L1 5498 6164 -1 * 12725 128 66 27 chr20 45630334 45632388 -21035617 - Tigger1 DNA MER2_type -187 2231 89 2480 75 0 0 chr20 45632388 45632693 -21035312 + AluY SINE Alu 1 305 -6 12725 128 66 27 chr20 45632693 45632786 -21035219 - Tigger1 DNA MER2_type -2329 89 1 23 54 0 0 chr20 45632925 45632962 -21035043 + AT_rich Low_complexity Low_complexity 1 37 0 5348 145 16 13 chr20 45633034 45633929 -21034076 - L1MA7 LINE L1 0 7710 6814 4616 174 17 6 chr20 45633971 45634851 -21033154 - L1MA7 LINE L1 -745 6820 5931 694 172 0 16 chr20 45634852 45634980 -21033025 + LTR47B LTR ERVL 318 443 0 1837 232 74 38 chr20 45634981 45635851 -21032154 - L1MA7 LINE L1 -4246 3320 2277 720 330 71 28 chr20 45636203 45636666 -21031339 - L1MA7 LINE L1 -5797 1699 1217 1630 263 24 23 chr20 45636923 45637455 -21030550 - L1M1 LINE L1 -4324 3241 2709 * 6249 236 44 37 chr20 45637449 45637630 -21030375 - L1M1 LINE L1 -5296 2190 2012 2494 155 70 2 chr20 45637630 45638031 -21029974 + MSTA LTR MaLR 1 428 0 6249 236 44 37 chr20 45638031 45638496 -21029509 - L1M1 LINE L1 -5474 2012 1552 1995 135 4 4 chr20 45638496 45638777 -21029228 + AluSx SINE Alu 1 281 -31 183 42 0 0 chr20 45638780 45638804 -21029201 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 6249 236 44 37 chr20 45638804 45639813 -21028192 - L1M1 LINE L1 -5935 1551 841 218 213 44 0 chr20 45641644 45641709 -21026296 + MIR SINE MIR 84 140 -68 1965 145 17 3 chr20 45644132 45644428 -21023577 - AluSx SINE Alu -12 300 1 5824 88 45 19 chr20 45644484 45645325 -21022680 - L1PA10 LINE L1 -9 6159 5297 279 0 0 0 chr20 45645328 45645359 -21022646 + (TTA)n Simple_repeat Simple_repeat 3 33 0 44885 36 9 1 chr20 45645359 45651449 -21016556 - L1PA3 LINE L1 -18 6137 1 2373 132 14 0 chr20 45651449 45651820 -21016185 - L1PA10 LINE L1 -838 5308 4933 754 266 32 0 chr20 45651818 45652066 -21015939 + L1 LINE L1 2302 2557 -3589 * 2398 201 115 80 chr20 45652068 45652798 -21015207 + MER21B LTR ERV1 3 758 -105 1408 185 88 8 chr20 45652819 45653171 -21014834 + L1 LINE L1 2553 2932 -3214 1080 148 35 6 chr20 45653171 45653340 -21014665 + AluJo SINE Alu 1 174 -138 2181 225 14 43 chr20 45653343 45653472 -21014533 + L1 LINE L1 2920 3051 -3095 2401 76 0 7 chr20 45653472 45653774 -21014231 + AluSc SINE Alu 1 300 -9 2181 225 14 43 chr20 45653774 45654345 -21013660 + L1 LINE L1 3051 3600 -2546 848 228 51 51 chr20 45654344 45654850 -21013155 + L1MB5 LINE L1 3898 4402 -1744 * 1811 138 123 0 chr20 45654850 45655118 -21012887 - AluJb SINE Alu 0 302 2 848 228 51 51 chr20 45655118 45655200 -21012805 + L1MB5 LINE L1 4402 4482 -1664 2459 93 0 0 chr20 45655200 45655511 -21012494 - AluSx SINE Alu -1 311 1 848 228 51 51 chr20 45655511 45655568 -21012437 + L1MB5 LINE L1 4482 4662 -1484 621 225 39 0 chr20 45655586 45655715 -21012290 + LTR42 LTR ERVL 1 134 -361 2764 162 25 74 chr20 45655772 45656152 -21011853 + L1MB5 LINE L1 5005 5402 -772 2315 99 0 3 chr20 45656152 45656454 -21011551 + AluSx SINE Alu 1 301 -11 2764 162 25 74 chr20 45656454 45656969 -21011036 + L1MB5 LINE L1 5402 5865 -309 1540 241 69 39 chr20 45656964 45657151 -21010854 + L1MC4a LINE L1 5425 5605 -2203 * 2342 92 0 0 chr20 45657151 45657444 -21010561 - AluSg SINE Alu -17 293 1 1540 241 69 39 chr20 45657444 45657721 -21010284 + L1MC4a LINE L1 5605 5903 -1905 768 306 80 17 chr20 45657782 45658317 -21009688 + L1 LINE L1 3599 4167 -1979 377 369 146 22 chr20 45658407 45658860 -21009145 - L2 LINE L2 -1923 1391 883 2152 122 0 10 chr20 45658947 45659250 -21008755 + AluSx SINE Alu 1 300 -12 264 183 232 12 chr20 45659811 45659893 -21008112 + MIR SINE MIR 45 144 -64 318 278 21 56 chr20 45662557 45662701 -21005304 + MIR3 SINE MIR 7 145 -63 183 315 82 0 chr20 45662771 45662844 -21005161 + L2 LINE L2 3195 3273 -40 555 256 153 22 chr20 45662855 45663078 -21004927 + MIR SINE MIR 9 260 -2 202 323 69 15 chr20 45663711 45663841 -21004164 + MIR SINE MIR 47 183 -79 2238 116 0 0 chr20 45663959 45664252 -21003753 + AluSg SINE Alu 1 293 -17 750 195 82 36 chr20 45664874 45665069 -21002936 - MER3 DNA MER1_type -5 204 1 350 241 25 0 chr20 45665428 45665507 -21002498 + MER69 DNA AcHobo 2 82 -95 1579 207 49 12 chr20 45665950 45666376 -21001629 + MER69 DNA AcHobo 2085 2526 0 241 313 0 0 chr20 45667513 45667580 -21000425 + L2 LINE L2 3229 3295 -18 660 194 0 0 chr20 45667623 45667754 -21000251 + AluSg/x SINE Alu 181 311 0 6558 164 50 14 chr20 45667754 45669929 -20998076 + L1MB1 LINE L1 3917 6167 -1 2142 124 0 0 chr20 45669955 45670254 -20997751 + AluSg SINE Alu 1 299 -11 1461 289 54 30 chr20 45670267 45671168 -20996837 + L1 LINE L1 3472 4394 -1752 * 24384 169 16 35 chr20 45671160 45673016 -20994989 + L1PA11 LINE L1 11 1899 -4590 1998 136 3 0 chr20 45673016 45673310 -20994695 + AluSq SINE Alu 1 295 -18 24384 169 16 35 chr20 45673310 45675395 -20992610 + L1PA11 LINE L1 1899 4021 -2468 1373 189 47 40 chr20 45675395 45675692 -20992313 + AluSg SINE Alu 2 300 0 24384 169 16 35 chr20 45675692 45678335 -20989670 + L1PA11 LINE L1 4021 6481 -8 317 253 154 42 chr20 45678347 45678551 -20989454 + L1 LINE L1 4390 4570 -1576 1963 146 3 0 chr20 45678551 45678860 -20989145 - AluSx SINE Alu -2 310 1 317 253 154 42 chr20 45678860 45679185 -20988820 + L1 LINE L1 4570 5050 -1096 563 269 123 18 chr20 45679211 45679430 -20988575 + MIR SINE MIR 1 242 -20 594 221 30 99 chr20 45680452 45680650 -20987355 + MIR SINE MIR 19 205 -57 2134 73 3 77 chr20 45681674 45682001 -20986004 + AluSp SINE Alu 1 303 -10 529 245 106 43 chr20 45682070 45682166 -20985839 - MIR SINE MIR 0 262 173 2390 67 0 0 chr20 45682166 45682463 -20985542 + AluY SINE Alu 1 297 -14 315 65 0 0 chr20 45682463 45682509 -20985496 + (TA)n Simple_repeat Simple_repeat 2 47 0 529 245 106 43 chr20 45682509 45682619 -20985386 - MIR SINE MIR -88 174 42 279 229 115 31 chr20 45682846 45682942 -20985063 + L2 LINE L2 3209 3312 -1 233 114 0 0 chr20 45685121 45685156 -20982849 + L1PB1 LINE L1 5929 5963 -188 5329 121 22 32 chr20 45685196 45686465 -20981540 + L1P4 LINE L1 4465 5714 -460 2975 211 61 1 chr20 45686462 45686623 -20981382 - L1 LINE L1 -3210 3638 3488 * 7598 31 37 0 chr20 45686623 45687531 -20980474 - L1PA5 LINE L1 -5 6149 5236 2975 211 61 1 chr20 45687531 45688155 -20979850 - L1 LINE L1 -3360 3488 2799 550 133 0 0 chr20 45688156 45688239 -20979766 - AluSc SINE Alu 0 309 227 857 79 0 0 chr20 45688239 45688353 -20979652 - AluSc SINE Alu -195 114 1 4827 192 22 40 chr20 45688353 45688613 -20979392 - L1 LINE L1 -4050 2799 2536 1820 74 0 0 chr20 45688613 45688844 -20979161 - AluY SINE Alu -4 307 77 1527 184 21 3 chr20 45688852 45689140 -20978865 - AluJb SINE Alu -8 304 12 4827 192 22 40 chr20 45689140 45690074 -20977931 - L1 LINE L1 -4320 2529 1617 558 144 10 31 chr20 45690230 45690327 -20977678 - AluSq/x SINE Alu -205 108 14 2246 98 0 0 chr20 45690661 45690958 -20977047 - AluSg SINE Alu -13 297 1 837 273 92 49 chr20 45690965 45691576 -20976429 - L2 LINE L2 -8 3264 2525 1837 141 14 0 chr20 45691576 45691852 -20976153 - AluJb SINE Alu -17 295 16 837 273 92 49 chr20 45691852 45692010 -20975995 - L2 LINE L2 -747 2525 2375 411 226 47 19 chr20 45693360 45693466 -20974539 + MIR SINE MIR 89 197 -65 447 228 41 55 chr20 45693493 45693638 -20974367 + MIR SINE MIR 70 212 -50 1673 175 0 10 chr20 45693641 45693932 -20974073 + AluJo SINE Alu 1 288 -24 726 142 0 0 chr20 45693983 45694089 -20973916 + FLAM_C SINE Alu 2 107 -36 385 233 25 42 chr20 45694105 45694225 -20973780 - MIR SINE MIR -36 226 109 997 145 6 6 chr20 45694227 45694386 -20973619 - FRAM SINE Alu -17 159 1 274 235 0 0 chr20 45694416 45694467 -20973538 + MER58B DNA MER1_type 1 51 -290 * 589 235 23 0 chr20 45694460 45694592 -20973413 + MER58B DNA MER1_type 202 336 -5 1758 144 7 20 chr20 45694816 45695108 -20972897 + AluJo SINE Alu 1 288 -24 250 248 138 9 chr20 45695112 45695221 -20972784 + MER113 DNA MER1_type? 399 521 0 210 274 36 48 chr20 45695246 45695330 -20972675 - MIR SINE MIR -80 128 46 785 167 8 0 chr20 45697206 45697332 -20970673 - FLAM_A SINE Alu -3 130 4 276 304 54 27 chr20 45697824 45697936 -20970069 - MIR SINE MIR -55 207 93 473 235 60 34 chr20 45698223 45698372 -20969633 + MER5A DNA MER1_type 37 189 0 310 327 35 0 chr20 45698375 45698488 -20969517 - MIR3 SINE MIR -51 157 41 225 299 7 73 chr20 45698553 45698690 -20969315 - MIR SINE MIR -58 150 23 319 287 213 0 chr20 45699088 45699196 -20968809 + MER91A DNA MER1_type 58 188 -8 408 241 35 9 chr20 45699291 45699407 -20968598 - MIR3 SINE MIR -23 185 67 472 224 63 11 chr20 45699736 45699868 -20968137 + MIR SINE MIR 34 168 -62 686 229 142 29 chr20 45699900 45700105 -20967900 - MIR SINE MIR -5 257 30 1669 158 14 14 chr20 45700112 45700274 -20967731 - AluJo SINE Alu -15 297 133 2022 98 0 0 chr20 45700274 45700550 -20967455 - AluSg SINE Alu -9 301 26 1669 158 14 14 chr20 45700550 45700684 -20967321 - AluJo SINE Alu -178 134 1 885 187 23 51 chr20 45700870 45701016 -20966989 + MER3 DNA MER1_type 2 142 -67 2103 104 3 26 chr20 45701016 45701324 -20966681 - AluSx SINE Alu -9 303 3 885 187 23 51 chr20 45701324 45701391 -20966614 + MER3 DNA MER1_type 142 209 0 707 273 29 10 chr20 45701538 45701747 -20966258 - MIR SINE MIR -48 214 2 192 322 78 52 chr20 45701776 45701891 -20966114 - MIR SINE MIR -72 190 73 2109 118 0 7 chr20 45702117 45702423 -20965582 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr20 45702608 45702631 -20965374 + AT_rich Low_complexity Low_complexity 1 23 0 1946 143 3 0 chr20 45702642 45702935 -20965070 + AluSq SINE Alu 3 296 -17 290 234 42 13 chr20 45703008 45703104 -20964901 - MIR3 SINE MIR -33 175 95 346 276 16 39 chr20 45703865 45703992 -20964013 + MIR SINE MIR 47 170 -92 2415 54 0 6 chr20 45704252 45704565 -20963440 - AluY SINE Alu 0 311 1 225 94 0 0 chr20 45704613 45704645 -20963360 + (CCCCCA)n Simple_repeat Simple_repeat 1 32 0 286 154 0 0 chr20 45704789 45704828 -20963177 - MER81 DNA DNA -1 113 75 24 0 0 0 chr20 45704885 45704909 -20963096 + AT_rich Low_complexity Low_complexity 1 24 0 1962 128 3 0 chr20 45704909 45705198 -20962807 - AluSx SINE Alu -22 290 1 197 0 71 0 chr20 45705198 45705226 -20962779 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 2132 92 0 3 chr20 45705226 45705509 -20962496 - AluSq SINE Alu -31 282 1 1858 121 4 18 chr20 45705520 45705801 -20962204 - AluJb SINE Alu -24 288 12 218 286 52 13 chr20 45705887 45705964 -20962041 - MIR SINE MIR -67 195 116 431 304 175 5 chr20 45706024 45706241 -20961764 + MIR SINE MIR 5 258 -4 2213 101 10 0 chr20 45706417 45706725 -20961280 - AluSx SINE Alu -1 311 1 868 183 110 133 chr20 45706762 45706897 -20961108 - AluJo SINE Alu -8 294 157 1753 166 0 3 chr20 45706897 45707187 -20960818 - AluJb SINE Alu 0 312 24 868 183 110 133 chr20 45707187 45707216 -20960789 - AluJo SINE Alu -145 157 129 1914 101 80 3 chr20 45707216 45707504 -20960501 - AluSg SINE Alu 0 310 1 868 183 110 133 chr20 45707504 45707639 -20960366 - AluJo SINE Alu -173 129 1 781 208 6 6 chr20 45707799 45707958 -20960047 + MIR SINE MIR 94 252 -10 1171 237 162 14 chr20 45707982 45708231 -20959774 + L2 LINE L2 2741 2952 -361 2062 117 7 0 chr20 45708231 45708529 -20959476 - AluSx SINE Alu -11 301 2 1171 237 162 14 chr20 45708529 45708775 -20959230 + L2 LINE L2 2952 3312 -1 2089 117 3 0 chr20 45708895 45709193 -20958812 + AluSq SINE Alu 1 299 -14 1699 107 118 8 chr20 45709619 45709881 -20958124 + AluSg1 SINE Alu 1 291 -18 1702 149 37 21 chr20 45710633 45710961 -20957044 + MER95 LTR ERV 1 333 -98 2109 108 0 0 chr20 45710997 45711285 -20956720 + AluSx SINE Alu 1 288 -24 302 265 0 48 chr20 45711286 45711369 -20956636 + L1MC4 LINE L1 6624 6702 -1340 * 351 326 0 0 chr20 45711332 45711421 -20956584 - L1MC4 LINE L1 -1339 6703 6615 * 382 255 0 43 chr20 45711370 45711464 -20956541 + L1MC4 LINE L1 6614 6703 -1339 1589 185 59 13 chr20 45711472 45711775 -20956230 + MLT2D LTR ERVL 98 414 0 277 381 0 0 chr20 45712348 45712516 -20955489 + (CCA)n Simple_repeat Simple_repeat 1 168 0 2092 125 0 0 chr20 45712624 45712920 -20955085 - AluSx SINE Alu -16 296 1 2496 229 48 11 chr20 45713319 45714052 -20953953 + L1M4 LINE L1 3325 4084 -2062 581 241 96 56 chr20 45714122 45714371 -20953634 - L1M4 LINE L1 -2878 3268 3010 280 250 30 10 chr20 45715570 45715670 -20952335 - LTR33 LTR ERVL -13 508 407 775 161 0 0 chr20 45716140 45716258 -20951747 - FLAM_C SINE Alu -24 119 2 639 217 54 54 chr20 45716267 45716470 -20951535 + MER112 DNA MER1_type 46 248 -12 593 308 18 109 chr20 45717322 45717543 -20950462 - L2 LINE L2 -21 3251 3092 1882 125 47 14 chr20 45717543 45717839 -20950166 - AluSx SINE Alu -6 306 1 593 308 18 109 chr20 45717839 45718075 -20949930 - L2 LINE L2 -180 3092 2836 25 31 0 0 chr20 45718304 45718336 -20949669 + AT_rich Low_complexity Low_complexity 1 32 0 1861 140 38 3 chr20 45718475 45718768 -20949237 - AluSx SINE Alu -9 303 1 363 252 175 14 chr20 45718997 45719140 -20948865 + MIR SINE MIR 47 212 -50 2179 109 7 3 chr20 45719203 45719496 -20948509 - AluSq SINE Alu -18 295 2 500 208 0 0 chr20 45720313 45720414 -20947591 + MIR SINE MIR 49 149 -113 946 211 0 0 chr20 45720459 45720625 -20947380 - AluJb SINE Alu -10 302 137 215 292 19 62 chr20 45720824 45720985 -20947020 - L2 LINE L2 -62 3251 3098 * 663 331 45 0 chr20 45720968 45721276 -20946729 - L2 LINE L2 -443 2871 2550 2507 70 6 10 chr20 45721281 45721595 -20946410 + AluSq SINE Alu 1 313 0 3142 154 62 8 chr20 45722010 45722543 -20945462 + MER68 LTR ERV1 1 562 0 225 65 0 0 chr20 45722677 45722708 -20945297 + (TG)n Simple_repeat Simple_repeat 2 32 0 2087 109 0 31 chr20 45722708 45723001 -20945004 - AluSx SINE Alu -28 284 1 203 287 45 76 chr20 45723547 45723582 -20944423 + L3 LINE CR1 1349 1384 -193 1946 144 3 29 chr20 45723582 45723894 -20944111 + AluJo SINE Alu 1 304 -8 203 287 45 76 chr20 45723894 45724015 -20943990 + L3 LINE CR1 1384 1500 -77 212 333 86 9 chr20 45724840 45724945 -20943060 + MIR SINE MIR 16 128 -80 33 43 0 0 chr20 45725092 45725139 -20942866 + AT_rich Low_complexity Low_complexity 1 47 0 583 272 152 56 chr20 45725520 45726014 -20941991 - MLT1H LTR MaLR -1 548 1 1782 162 3 10 chr20 45726139 45726442 -20941563 + AluJo SINE Alu 1 301 -11 1039 174 0 0 chr20 45726444 45726599 -20941406 + AluJo/FRAM SINE Alu 136 290 -22 182 206 16 0 chr20 45726621 45726684 -20941321 + (TA)n Simple_repeat Simple_repeat 2 65 0 379 366 0 0 chr20 45727088 45727219 -20940786 + MIR3 SINE MIR 30 160 -48 180 0 0 0 chr20 45727300 45727320 -20940685 + (TA)n Simple_repeat Simple_repeat 2 21 0 2250 106 26 0 chr20 45727327 45727629 -20940376 - AluSg SINE Alu 0 310 1 423 0 0 0 chr20 45727633 45727680 -20940325 + (CA)n Simple_repeat Simple_repeat 2 48 0 192 194 0 0 chr20 45728579 45728615 -20939390 - L2 LINE L2 -32 3240 3205 2271 106 7 7 chr20 45728997 45729299 -20938706 - AluSq SINE Alu -11 302 1 2350 92 7 0 chr20 45730176 45730471 -20937534 - AluSx SINE Alu -15 297 1 1018 101 0 0 chr20 45730750 45730879 -20937126 - AluSg/x SINE Alu -17 295 167 429 77 0 0 chr20 45730898 45730950 -20937055 + AluSp SINE Alu 103 154 -159 2396 95 0 3 chr20 45731284 45731589 -20936416 + AluSq SINE Alu 1 304 -9 238 147 0 27 chr20 45731817 45731892 -20936113 + (GA)n Simple_repeat Simple_repeat 1 73 0 306 205 17 103 chr20 45733132 45733181 -20934824 + MIR SINE MIR 156 208 -54 2203 113 0 0 chr20 45733181 45733473 -20934532 + AluSx SINE Alu 1 292 -20 306 205 17 103 chr20 45733473 45733540 -20934465 + MIR SINE MIR 208 262 0 1898 67 0 0 chr20 45733606 45733830 -20934175 - AluY SINE Alu -11 300 77 1650 194 20 3 chr20 45733838 45734137 -20933868 - AluJb SINE Alu -8 304 1 6625 163 28 24 chr20 45734137 45735467 -20932538 - L1M2 LINE L1 -4325 2464 1145 1649 175 19 88 chr20 45735746 45736123 -20931882 - MLT1A1 LTR MaLR -10 355 5 467 196 71 31 chr20 45736127 45736261 -20931744 + L1MA7 LINE L1 6123 6272 -40 499 138 5 8 chr20 45736266 45736358 -20931647 + L1MA9 LINE L1 6229 6333 -1 5687 172 32 32 chr20 45736452 45737526 -20930479 + L1MA7 LINE L1 3928 5013 -1186 675 110 0 0 chr20 45737526 45737617 -20930388 + AluSp/q SINE Alu 208 298 -15 5687 172 32 32 chr20 45737617 45738056 -20929949 + L1MA7 LINE L1 5013 5450 -749 6108 128 203 94 chr20 45738056 45739510 -20928495 + pTR5 LTR ERV1 743 2373 -65 2139 116 0 3 chr20 45739510 45739804 -20928201 + AluY SINE Alu 1 293 -18 6108 128 203 94 chr20 45739804 45739878 -20928127 + pTR5 LTR ERV1 2373 2438 0 2327 142 8 10 chr20 45739881 45740268 -20927737 + L1MA7 LINE L1 5447 5832 -459 2330 149 31 14 chr20 45740427 45740871 -20927134 + L1MA7 LINE L1 5814 6265 -26 1772 149 0 50 chr20 45740878 45741179 -20926826 + AluJo SINE Alu 6 291 -21 277 236 0 24 chr20 45741181 45741304 -20926701 + (TA)n Simple_repeat Simple_repeat 1 120 0 424 236 0 28 chr20 45741315 45741497 -20926508 + (TA)n Simple_repeat Simple_repeat 1 177 0 288 266 16 16 chr20 45741509 45741637 -20926368 + (TA)n Simple_repeat Simple_repeat 1 128 0 348 333 13 20 chr20 45742581 45742734 -20925271 - ERVL LTR ERVL -768 4996 4845 1775 183 7 3 chr20 45743111 45743406 -20924599 + AluJb SINE Alu 1 296 -16 902 218 0 0 chr20 45743412 45743568 -20924437 + AluJb SINE Alu 137 292 -20 680 121 0 85 chr20 45743609 45743707 -20924298 + L1MB4 LINE L1 6052 6136 -44 1842 153 31 0 chr20 45743707 45743994 -20924011 + AluSx SINE Alu 1 296 -16 680 121 0 85 chr20 45743994 45744036 -20923969 + L1MB4 LINE L1 6136 6180 0 2267 103 0 0 chr20 45744384 45744674 -20923331 - AluSc SINE Alu -19 290 1 405 0 0 0 chr20 45744687 45744732 -20923273 + (TG)n Simple_repeat Simple_repeat 2 46 0 730 165 0 0 chr20 45744732 45744847 -20923158 - AluJb SINE Alu -197 115 1 437 326 96 50 chr20 45744891 45745327 -20922678 - ERVL LTR ERVL -1781 3983 3528 2584 69 0 0 chr20 45746455 45746760 -20921245 - AluY SINE Alu -6 305 1 1987 145 0 3 chr20 45746904 45747193 -20920812 + AluSx SINE Alu 1 288 -24 225 267 47 0 chr20 45747196 45747282 -20920723 - L1MC4 LINE L1 -1339 6703 6614 * 248 224 0 82 chr20 45747210 45747308 -20920697 + L1MC4 LINE L1 6614 6703 -1339 226 143 0 0 chr20 45747310 45747352 -20920653 + LTR66 LTR ERVL 398 439 -171 1607 181 59 13 chr20 45747382 45747685 -20920320 + MLT2D LTR ERVL 98 414 0 277 381 0 0 chr20 45748259 45748427 -20919578 + (CCA)n Simple_repeat Simple_repeat 1 168 0 2218 125 0 0 chr20 45748535 45748831 -20919174 - AluSx SINE Alu -16 296 1 2520 232 48 11 chr20 45749233 45749966 -20918039 + L1M4 LINE L1 3325 4084 -2062 436 253 92 52 chr20 45750036 45750285 -20917720 - L1M4 LINE L1 -2878 3268 3010 2100 116 0 23 chr20 45751287 45751597 -20916408 + AluSx SINE Alu 1 303 -9 666 179 9 0 chr20 45752672 45752778 -20915227 + FLAM_A SINE Alu 1 107 -35 593 97 21 0 chr20 45752785 45752878 -20915127 + (TAGA)n Simple_repeat Simple_repeat 1 95 0 2279 107 0 7 chr20 45752878 45753187 -20914818 + AluSg SINE Alu 3 309 -1 777 167 8 0 chr20 45755330 45755456 -20912549 + AluJo/FLAM SINE Alu 6 132 -180 2227 105 3 0 chr20 45755459 45755767 -20912238 + AluSq SINE Alu 1 309 0 1708 186 10 0 chr20 45755772 45756068 -20911937 + AluSx SINE Alu 1 299 -13 5899 178 54 71 chr20 45756078 45756265 -20911740 + L1 LINE L1 3159 3348 -2798 2382 95 3 0 chr20 45756265 45756561 -20911444 - AluSp SINE Alu -16 297 1 5899 178 54 71 chr20 45756561 45756877 -20911128 + L1 LINE L1 3348 3668 -2478 2034 121 3 27 chr20 45756877 45757174 -20910831 + AluSx SINE Alu 1 290 -22 5899 178 54 71 chr20 45757174 45758248 -20909757 + L1 LINE L1 3668 4760 -1386 1372 88 0 0 chr20 45758248 45758430 -20909575 - AluYa5 SINE Alu -3 308 127 5899 178 54 71 chr20 45758430 45758742 -20909263 + L1 LINE L1 4760 5076 -1070 2233 109 0 7 chr20 45758742 45759045 -20908960 + AluSx SINE Alu 1 301 -11 5899 178 54 71 chr20 45759045 45759079 -20908926 + L1 LINE L1 5076 5109 -1037 1747 152 4 22 chr20 45759079 45759356 -20908649 + AluSx SINE Alu 22 293 -19 5899 178 54 71 chr20 45759356 45759412 -20908593 + L1 LINE L1 5109 5164 -982 769 189 0 0 chr20 45759412 45759539 -20908466 + FLAM_C SINE Alu 1 127 -6 5899 178 54 71 chr20 45759539 45759603 -20908402 + L1 LINE L1 5164 5309 -837 1887 134 18 25 chr20 45759617 45759901 -20908104 + AluSx SINE Alu 6 287 -25 271 194 0 82 chr20 45759908 45760006 -20907999 + L1MC4 LINE L1 6614 6703 -1339 233 216 45 45 chr20 45760008 45760096 -20907909 - L1MC4 LINE L1 -1341 6701 6614 226 300 0 0 chr20 45760030 45760120 -20907885 + L1MC4 LINE L1 6614 6703 -1339 * 2322 85 0 48 chr20 45760910 45761090 -20906915 - AluSx SINE Alu -11 301 141 2340 85 0 25 chr20 45761090 45761406 -20906599 - AluY SINE Alu -3 308 1 2322 85 0 48 chr20 45761406 45761541 -20906464 - AluSx SINE Alu -171 141 1 2752 84 88 17 chr20 45761666 45762084 -20905921 + LTR7 LTR ERV1 1 448 -2 9323 175 123 111 chr20 45762086 45766032 -20901973 + HERVH LTR ERV1 1 3993 -3720 3085 134 0 2 chr20 45766034 45766652 -20901353 + HERVH LTR ERV1 4488 5149 -2564 1097 114 0 0 chr20 45766653 45766819 -20901186 + HERVH LTR ERV1 5600 5765 -1948 * 2253 99 56 21 chr20 45766792 45767166 -20900839 + HERVH LTR ERV1 7327 7713 0 2810 85 92 5 chr20 45767166 45767578 -20900427 + LTR7 LTR ERV1 1 448 -2 379 213 13 0 chr20 45767608 45767683 -20900322 + MER5A DNA MER1_type 31 106 -83 1192 193 14 5 chr20 45768021 45768234 -20899771 + MER20 DNA MER1_type 5 219 0 1459 148 0 0 chr20 45769133 45769349 -20898656 + AluJo SINE Alu 87 302 -10 22 35 0 0 chr20 45769426 45769455 -20898550 + AT_rich Low_complexity Low_complexity 1 29 0 332 281 16 0 chr20 45769533 45769654 -20898351 + L1ME4a LINE L1 5935 6057 -64 1022 203 5 5 chr20 45769692 45769894 -20898111 + L1PA15 LINE L1 5964 6165 0 2139 104 24 17 chr20 45770220 45770517 -20897488 + AluSx SINE Alu 1 299 -13 188 271 21 0 chr20 45770577 45770625 -20897380 + MER5B DNA MER1_type 1 49 -129 247 304 11 43 chr20 45770651 45770743 -20897262 + MER5A DNA MER1_type 60 148 -41 2105 117 24 108 chr20 45770759 45771108 -20896897 - L1MB5 LINE L1 -185 5989 5685 1666 181 19 13 chr20 45771108 45771417 -20896588 - AluJo SINE Alu -1 311 1 2105 117 24 108 chr20 45771417 45771522 -20896483 - L1MB5 LINE L1 -489 5685 5573 1955 164 0 20 chr20 45771526 45771825 -20896180 - AluJo SINE Alu -17 295 3 417 178 0 0 chr20 45771837 45771910 -20896095 + Charlie5 DNA MER1_type 2552 2624 0 2218 125 3 0 chr20 45772020 45772325 -20895680 + AluJb SINE Alu 1 306 -6 2348 105 0 0 chr20 45772389 45772684 -20895321 + AluSc SINE Alu 3 297 -12 357 303 38 8 chr20 45772749 45772803 -20895202 - MIR SINE MIR 0 262 211 2241 121 0 0 chr20 45772803 45773108 -20894897 - AluSx SINE Alu -7 305 1 357 303 38 8 chr20 45773108 45773185 -20894820 - MIR SINE MIR -51 211 127 238 147 0 27 chr20 45774397 45774472 -20893533 + (TC)n Simple_repeat Simple_repeat 1 73 0 2436 94 0 3 chr20 45774700 45775007 -20892998 - AluSq SINE Alu -7 306 1 432 77 0 0 chr20 45775341 45775393 -20892612 - AluSp SINE Alu -159 154 103 1025 112 0 0 chr20 45775412 45775546 -20892459 + AluSg/x SINE Alu 165 298 -12 2365 92 7 0 chr20 45775820 45776115 -20891890 + AluSx SINE Alu 1 297 -15 2291 106 7 7 chr20 45776992 45777294 -20890711 + AluSq SINE Alu 1 302 -11 210 235 20 0 chr20 45777676 45777727 -20890278 + L2 LINE L2 3205 3256 -16 191 353 27 91 chr20 45778235 45778456 -20889549 + L2 LINE L2 2985 3191 -81 387 0 0 0 chr20 45778611 45778654 -20889351 + (TG)n Simple_repeat Simple_repeat 2 44 0 2273 106 26 0 chr20 45778658 45778960 -20889045 + AluSg SINE Alu 1 310 0 234 0 0 0 chr20 45778968 45778994 -20889011 + (TA)n Simple_repeat Simple_repeat 2 27 0 428 386 0 0 chr20 45779073 45779231 -20888774 - MIR3 SINE MIR -48 160 3 182 206 16 0 chr20 45779608 45779671 -20888334 + (TA)n Simple_repeat Simple_repeat 2 65 0 1044 175 0 0 chr20 45779693 45779847 -20888158 - AluJo/FRAM SINE Alu -22 290 137 1821 163 3 10 chr20 45779847 45780153 -20887852 - AluJo SINE Alu -8 304 1 497 282 145 50 chr20 45780278 45780772 -20887233 + MLT1H LTR MaLR 1 548 -1 32 43 0 0 chr20 45781152 45781198 -20886807 + AT_rich Low_complexity Low_complexity 1 46 0 244 333 86 9 chr20 45781345 45781450 -20886555 - MIR SINE MIR -80 128 16 263 287 45 76 chr20 45782275 45782396 -20885609 - L3 LINE CR1 -77 1500 1384 1985 144 3 29 chr20 45782396 45782709 -20885296 - AluJo SINE Alu -7 305 1 263 287 45 76 chr20 45782709 45782744 -20885261 - L3 LINE CR1 -193 1384 1349 219 336 115 16 chr20 45783133 45783255 -20884750 - MIR3 SINE MIR -30 178 45 2099 109 0 31 chr20 45783290 45783583 -20884422 + AluSx SINE Alu 1 284 -28 207 69 0 0 chr20 45783583 45783612 -20884393 + (CA)n Simple_repeat Simple_repeat 2 30 0 3183 154 62 8 chr20 45783746 45784279 -20883726 - MER68 LTR ERV1 0 562 1 745 309 36 84 chr20 45784474 45784694 -20883311 + L2 LINE L2 2364 2593 -721 2527 70 6 10 chr20 45784694 45785008 -20882997 - AluSq SINE Alu 0 313 1 745 309 36 84 chr20 45785008 45785321 -20882684 + L2 LINE L2 2593 2871 -443 324 279 96 58 chr20 45785304 45785512 -20882493 + L2 LINE L2 3098 3313 0 * 969 211 0 0 chr20 45785664 45785830 -20882175 + AluJb SINE Alu 137 302 -10 549 233 23 15 chr20 45785855 45785988 -20882017 - MIR SINE MIR -90 172 39 2197 116 3 0 chr20 45786793 45787086 -20880919 + AluSq SINE Alu 2 295 -18 427 252 175 14 chr20 45787149 45787292 -20880713 - MIR SINE MIR -50 212 47 2054 126 34 0 chr20 45787521 45787814 -20880191 + AluSx SINE Alu 1 303 -9 25 31 0 0 chr20 45787953 45787985 -20880020 + AT_rich Low_complexity Low_complexity 1 32 0 897 338 38 40 chr20 45788214 45788450 -20879555 + L2 LINE L2 2836 3071 -242 1908 125 47 14 chr20 45788450 45788746 -20879259 + AluSx SINE Alu 1 306 -6 897 338 38 40 chr20 45788746 45788988 -20879017 + L2 LINE L2 3071 3313 0 2344 110 0 0 chr20 45789145 45789454 -20878551 + AluY SINE Alu 1 309 -2 2584 70 0 3 chr20 45789611 45789923 -20878082 - AluY SINE Alu 0 311 1 2351 103 3 3 chr20 45790354 45790666 -20877339 + AluSp SINE Alu 1 312 -1 341 203 412 6 chr20 45790806 45790983 -20877022 - MIR SINE MIR -10 252 4 440 113 0 0 chr20 45791491 45791553 -20876452 + Alu SINE Alu 238 299 -13 2580 67 0 0 chr20 45791557 45791854 -20876151 + AluY SINE Alu 1 297 -14 2036 113 0 0 chr20 45792818 45793084 -20874921 + AluSx SINE Alu 44 309 -3 615 49 0 0 chr20 45793506 45793588 -20874417 - AluY SINE Alu -2 309 228 2494 57 7 0 chr20 45793630 45793929 -20874076 - AluSx SINE Alu -11 301 1 599 322 33 5 chr20 45794563 45794777 -20873228 + MIR SINE MIR 37 256 -6 309 204 216 131 chr20 45795176 45795352 -20872653 + MIR3 SINE MIR 17 207 -1 256 206 29 29 chr20 45795369 45795437 -20872568 + MIR SINE MIR 2 69 -193 1133 45 0 8 chr20 45795613 45795747 -20872258 + AluSp SINE Alu 1 133 -180 2419 78 0 0 chr20 45795750 45796043 -20871962 + AluSx SINE Alu 1 293 -19 251 345 27 9 chr20 45796050 45796160 -20871845 + MIR SINE MIR 151 262 0 2044 138 7 7 chr20 45796455 45796779 -20871226 - AluSx SINE Alu 0 312 1 262 293 49 0 chr20 45796893 45796975 -20871030 + MIR SINE MIR 175 260 -2 853 121 23 15 chr20 45797002 45797134 -20870871 + AluJo/FLAM SINE Alu 1 133 -169 2421 68 7 0 chr20 45797134 45797430 -20870575 - AluY SINE Alu -13 298 1 1981 162 0 0 chr20 45797849 45798152 -20869853 + AluSx SINE Alu 1 303 -9 1831 131 101 3 chr20 45798366 45798702 -20869303 + L1MA9 LINE L1 5944 6312 0 1079 302 108 11 chr20 45798975 45799429 -20868576 + L2 LINE L2 1760 2257 -1057 673 326 69 45 chr20 45799431 45799587 -20868418 + L2 LINE L2 2642 2793 -479 7683 30 1 0 chr20 45799587 45800826 -20867179 + L1PA4 LINE L1 4915 6154 -1 673 326 69 45 chr20 45800826 45801199 -20866806 + L2 LINE L2 2793 3272 0 734 294 150 10 chr20 45801341 45801735 -20866270 - L2 LINE L2 -919 2395 1947 545 292 133 48 chr20 45801740 45802137 -20865868 + L2 LINE L2 2850 3280 -33 2122 113 6 50 chr20 45802158 45802476 -20865529 + AluSg SINE Alu 1 304 -6 2430 86 0 10 chr20 45802724 45803027 -20864978 + AluSq SINE Alu 1 300 -13 558 0 0 0 chr20 45803027 45803089 -20864916 + (TA)n Simple_repeat Simple_repeat 2 63 0 1792 134 0 0 chr20 45803092 45803339 -20864666 + AluSx SINE Alu 49 295 -17 1867 166 3 3 chr20 45803838 45804128 -20863877 + AluJo SINE Alu 1 290 -22 302 268 187 0 chr20 45804654 45804777 -20863228 - MIR SINE MIR -42 220 75 2104 137 26 3 chr20 45804811 45805154 -20862851 - L1MC1 LINE L1 0 6333 5983 277 242 150 46 chr20 45805357 45805510 -20862495 - MIR SINE MIR -74 188 20 510 238 28 186 chr20 45805959 45806249 -20861756 - MIR SINE MIR -7 255 12 * 1036 310 118 43 chr20 45806220 45807350 -20860655 + L2 LINE L2 2025 3249 -23 316 283 80 9 chr20 45807764 45807877 -20860128 + MIR3 SINE MIR 5 125 -83 * 600 263 136 34 chr20 45807874 45808110 -20859895 - MIR SINE MIR 0 262 3 1879 96 8 0 chr20 45808134 45808373 -20859632 + AluSp SINE Alu 1 241 -72 2433 81 3 0 chr20 45808406 45808701 -20859304 + AluSp SINE Alu 1 296 -17 2227 102 7 0 chr20 45809460 45809753 -20858252 - AluSx SINE Alu -17 295 1 302 226 21 0 chr20 45809770 45809863 -20858142 - L1M LINE L1 -2402 5406 5312 2242 96 0 17 chr20 45809997 45810290 -20857715 + AluSx SINE Alu 1 288 -24 1939 167 10 0 chr20 45810397 45810690 -20857315 + AluSx SINE Alu 1 296 -16 2292 82 4 0 chr20 45810691 45810971 -20857034 + AluSp SINE Alu 1 281 -32 264 100 0 0 chr20 45810971 45811011 -20856994 + (CAAT)n Simple_repeat Simple_repeat 4 43 0 392 274 92 18 chr20 45811786 45811950 -20856055 - MER117 DNA MER1_type -1 196 21 270 81 0 0 chr20 45812890 45812927 -20855078 + (T)n Simple_repeat Simple_repeat 1 37 0 190 284 210 0 chr20 45814009 45814090 -20853915 - MIR SINE MIR -107 155 58 1195 139 118 90 chr20 45814119 45814407 -20853598 - AluJb SINE Alu -6 296 1 1955 126 7 4 chr20 45816154 45816423 -20851582 + AluSx SINE Alu 1 270 -42 249 109 0 0 chr20 45816433 45816479 -20851526 + (TC)n Simple_repeat Simple_repeat 1 46 0 189 74 0 0 chr20 45816479 45816506 -20851499 + (TA)n Simple_repeat Simple_repeat 1 27 0 346 250 11 43 chr20 45816534 45816626 -20851379 + L1MC4 LINE L1 6615 6703 -1339 2804 20 3 0 chr20 45817163 45817469 -20850536 - AluYb8 SINE Alu -11 307 1 908 152 0 0 chr20 45817569 45817701 -20850304 + AluJb SINE Alu 1 132 -180 232 229 0 0 chr20 45818464 45818512 -20849493 + Alu SINE Alu 168 215 -87 2085 132 7 10 chr20 45818686 45818981 -20849024 + AluSx SINE Alu 1 294 -18 206 295 26 26 chr20 45819400 45819478 -20848527 + MIR SINE MIR 100 177 -85 336 137 192 0 chr20 45820319 45820392 -20847613 + MER5A DNA MER1_type 6 92 -97 1149 192 43 80 chr20 45820504 45820806 -20847199 + AluJo SINE Alu 1 291 -11 514 253 157 80 chr20 45820854 45821217 -20846788 + MLT1K LTR MaLR 189 579 -9 205 385 86 0 chr20 45821257 45821374 -20846631 - L2 LINE L2 -20 3252 3126 2427 98 3 3 chr20 45821426 45821733 -20846272 + AluSq SINE Alu 3 309 -4 381 152 303 0 chr20 45821816 45821915 -20846090 + MIR SINE MIR 127 255 -7 2234 128 0 0 chr20 45822072 45822370 -20845635 + AluSq SINE Alu 1 298 -15 709 169 11 8 chr20 45822436 45822614 -20845391 + AluJo SINE Alu 83 302 -10 186 308 46 0 chr20 45822615 45822680 -20845325 - L2 LINE L2 -535 2779 2712 2328 101 3 10 chr20 45822680 45822987 -20845018 - AluSp SINE Alu -8 305 1 2002 135 32 0 chr20 45822991 45823273 -20844732 - AluSx SINE Alu -21 291 1 27 49 0 0 chr20 45823281 45823322 -20844683 + AT_rich Low_complexity Low_complexity 1 41 0 453 256 169 0 chr20 45823416 45823576 -20844429 + MIR SINE MIR 74 260 -2 1993 140 10 13 chr20 45823697 45823997 -20844008 + AluJb SINE Alu 1 299 -13 2331 99 7 0 chr20 45823997 45824289 -20843716 + AluSq SINE Alu 1 294 -19 646 175 216 0 chr20 45824290 45824461 -20843544 - MIR SINE MIR -24 238 31 342 319 38 21 chr20 45824535 45824770 -20843235 - L2 LINE L2 -217 3055 2817 1746 129 6 89 chr20 45825798 45826123 -20841882 - AluJo SINE Alu -10 302 5 1788 139 30 4 chr20 45827342 45827609 -20840396 - AluJo SINE Alu -38 274 1 2444 82 7 0 chr20 45827620 45827924 -20840081 - AluSx SINE Alu -6 306 1 2292 104 3 19 chr20 45827934 45828252 -20839753 - AluSp SINE Alu 0 313 1 195 322 26 52 chr20 45828433 45828548 -20839457 + L2 LINE L2 3159 3270 -2 216 360 9 18 chr20 45828550 45828661 -20839344 - L2 LINE L2 -8 3264 3155 192 152 0 0 chr20 45828884 45828917 -20839088 + CT-rich Low_complexity Low_complexity 2 34 0 319 306 147 13 chr20 45829958 45830115 -20837890 + MIR3 SINE MIR 3 180 -28 297 243 131 9 chr20 45830258 45830365 -20837640 - MIR SINE MIR -8 254 135 1687 152 11 19 chr20 45830396 45830666 -20837339 - AluJb SINE Alu -40 272 5 2062 123 0 60 chr20 45831295 45831482 -20836523 - AluSx SINE Alu 0 312 115 2511 89 3 6 chr20 45831482 45831795 -20836210 - AluSp SINE Alu 0 313 2 2062 123 0 60 chr20 45831795 45831830 -20836175 - AluSx SINE Alu -197 115 79 2390 66 0 26 chr20 45831830 45832132 -20835873 + AluY SINE Alu 1 294 -17 2062 123 0 60 chr20 45832132 45832240 -20835765 - AluSx SINE Alu -233 79 1 227 277 45 71 chr20 45832305 45832386 -20835619 + L2 LINE L2 2820 2902 -370 2219 114 0 10 chr20 45832386 45832692 -20835313 + AluSg SINE Alu 1 303 -7 227 277 45 71 chr20 45832692 45832877 -20835128 + L2 LINE L2 2902 3079 -193 658 263 0 13 chr20 45833033 45833189 -20834816 + L3 LINE CR1 1357 1510 -67 726 143 0 30 chr20 45833201 45833334 -20834671 + FLAM_C SINE Alu 5 133 0 1718 166 18 4 chr20 45833348 45833626 -20834379 + AluJo SINE Alu 9 290 -22 2107 118 0 82 chr20 45833628 45834018 -20833987 + AluSx SINE Alu 1 362 0 403 309 73 0 chr20 45834052 45834188 -20833817 + MIR3 SINE MIR 60 205 -3 2152 118 7 0 chr20 45834363 45834643 -20833362 + AluSx SINE Alu 1 282 -30 207 0 0 0 chr20 45834652 45834675 -20833330 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 368 274 124 48 chr20 45834689 45834875 -20833130 + MIR SINE MIR 50 249 -13 1668 150 0 8 chr20 45835233 45835499 -20832506 + AluJb SINE Alu 41 304 -8 288 130 0 0 chr20 45835499 45835545 -20832460 + (GA)n Simple_repeat Simple_repeat 1 46 0 215 221 35 18 chr20 45835547 45835612 -20832393 + MIR SINE MIR 71 136 -72 256 253 13 40 chr20 45835768 45835843 -20832162 - MIR SINE MIR -111 151 79 192 111 0 0 chr20 45836710 45836746 -20831259 + (CGA)n Simple_repeat Simple_repeat 1 36 0 312 224 103 52 chr20 45836929 45837045 -20830960 + MIR SINE MIR 69 190 -72 188 214 0 0 chr20 45837102 45837144 -20830861 - L2 LINE L2 -18 3295 3254 259 167 181 0 chr20 45837153 45837225 -20830780 + MIR SINE MIR 108 192 -70 238 206 29 29 chr20 45837561 45837629 -20830376 - MIR SINE MIR -68 140 73 488 299 125 22 chr20 45837811 45838035 -20829970 + MIR SINE MIR 12 258 -4 2569 50 20 0 chr20 45838549 45838851 -20829154 + AluY SINE Alu 1 308 -3 1025 145 19 19 chr20 45838851 45839002 -20829003 - AluJo/FRAM SINE Alu -26 286 133 649 250 53 61 chr20 45839229 45839457 -20828548 + MIR SINE MIR 16 241 -21 275 169 77 15 chr20 45839837 45839902 -20828103 - MER113 DNA MER1_type? -151 370 302 248 289 34 81 chr20 45839944 45839983 -20828022 - MIR3 SINE MIR -21 187 148 1082 209 64 90 chr20 45839983 45840091 -20827914 + MER113 DNA MER1_type? 1 110 -411 2325 109 10 10 chr20 45840091 45840403 -20827602 - AluSx SINE Alu 0 312 1 1739 126 43 66 chr20 45840410 45840712 -20827293 - AluJo SINE Alu -13 299 5 1082 209 64 90 chr20 45840712 45840810 -20827195 + MER113 DNA MER1_type? 116 215 -306 2137 97 0 0 chr20 45840810 45841079 -20826926 + AluSx SINE Alu 6 274 -38 188 65 0 32 chr20 45841079 45841110 -20826895 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 1082 209 64 90 chr20 45841110 45841228 -20826777 + MER113 DNA MER1_type? 214 334 -187 2228 102 7 20 chr20 45841228 45841532 -20826473 - AluSp SINE Alu -13 300 1 1082 209 64 90 chr20 45841532 45841567 -20826438 + MER113 DNA MER1_type? 334 368 -153 2533 51 0 29 chr20 45841567 45841881 -20826124 + AluY SINE Alu 1 305 -6 1082 209 64 90 chr20 45841881 45841942 -20826063 + MER113 DNA MER1_type? 368 429 -92 1569 174 9 60 chr20 45841942 45842258 -20825747 + AluJo SINE Alu 1 300 -12 1082 209 64 90 chr20 45842258 45842359 -20825646 + MER113 DNA MER1_type? 429 521 0 248 289 34 81 chr20 45842359 45842468 -20825537 - MIR3 SINE MIR -60 148 46 764 177 8 0 chr20 45844343 45844473 -20823532 - FLAM_A SINE Alu -2 131 1 266 313 54 27 chr20 45844970 45845082 -20822923 - MIR SINE MIR -55 207 93 431 255 54 27 chr20 45845369 45845518 -20822487 + MER5A DNA MER1_type 37 189 0 286 327 35 0 chr20 45845521 45845634 -20822371 - MIR3 SINE MIR -51 157 41 212 314 7 73 chr20 45845699 45845836 -20822169 - MIR SINE MIR -58 150 23 284 287 213 0 chr20 45846234 45846342 -20821663 + MER91A DNA MER1_type 58 188 -8 397 259 26 0 chr20 45846437 45846553 -20821452 - MIR3 SINE MIR -23 185 67 442 207 63 9 chr20 45846902 45847013 -20820992 + MIR SINE MIR 52 168 -94 638 229 142 29 chr20 45847045 45847250 -20820755 - MIR SINE MIR -5 257 30 1822 160 13 13 chr20 45847254 45847419 -20820586 - AluJo SINE Alu -12 300 133 2168 98 0 0 chr20 45847419 45847695 -20820310 - AluSg SINE Alu -9 301 26 1822 160 13 13 chr20 45847695 45847829 -20820176 - AluJo SINE Alu -178 134 1 855 182 23 51 chr20 45848015 45848161 -20819844 + MER3 DNA MER1_type 2 142 -67 2254 107 3 26 chr20 45848161 45848471 -20819534 - AluSx SINE Alu -7 305 3 855 182 23 51 chr20 45848471 45848538 -20819467 + MER3 DNA MER1_type 142 209 0 609 233 72 25 chr20 45848642 45848863 -20819142 - MIR SINE MIR -4 258 30 187 322 78 52 chr20 45848918 45849033 -20818972 - MIR SINE MIR -72 190 73 2258 121 0 7 chr20 45849259 45849565 -20818440 + AluSx SINE Alu 1 304 -8 23 0 0 0 chr20 45849750 45849773 -20818232 + AT_rich Low_complexity Low_complexity 1 23 0 2102 143 3 0 chr20 45849784 45850077 -20817928 + AluSq SINE Alu 3 296 -17 2067 138 10 3 chr20 45850110 45850407 -20817598 - AluJb SINE Alu -13 299 1 805 154 0 23 chr20 45850413 45850543 -20817462 - FLAM_C SINE Alu -16 127 1 612 222 54 54 chr20 45850551 45850754 -20817251 + MER112 DNA MER1_type 46 248 -12 751 275 81 9 chr20 45851217 45851439 -20816566 + MIR SINE MIR 20 257 -5 235 65 0 0 chr20 45851583 45851614 -20816391 - MER89 LTR ERV1 -27 532 502 1040 180 0 6 chr20 45851614 45851786 -20816219 - AluSg/x SINE Alu -8 304 134 2099 141 0 0 chr20 45851786 45852084 -20815921 - AluSx SINE Alu -14 298 1 1052 144 29 0 chr20 45852086 45852259 -20815746 - MER89 LTR ERV1 -51 508 331 1657 118 0 5 chr20 45852260 45852480 -20815525 + AluSx SINE Alu 1 219 -93 819 106 0 0 chr20 45852484 45852588 -20815417 + AluSp/q SINE Alu 186 289 -24 1579 160 111 3 chr20 45852589 45852896 -20815109 - MER89 LTR ERV1 -218 341 2 1348 160 0 24 chr20 45852994 45853206 -20814799 + AluJo SINE Alu 87 293 -19 267 192 110 0 chr20 45853936 45854009 -20813996 - MIR SINE MIR -61 201 121 281 215 0 0 chr20 45854017 45854082 -20813923 + MER58 DNA MER1_type 174 238 -103 314 118 39 0 chr20 45854084 45854135 -20813870 + MER58 DNA MER1_type 2364 2416 -4 1020 138 0 72 chr20 45854322 45854503 -20813502 - AluSg/x SINE Alu -11 299 132 2094 123 3 36 chr20 45854503 45854811 -20813194 - AluSx SINE Alu -14 298 1 2304 105 3 6 chr20 45855089 45855402 -20812603 - AluSx SINE Alu 0 312 1 316 328 73 23 chr20 45855571 45855748 -20812257 + MIR SINE MIR 20 205 -57 689 194 8 0 chr20 45856392 45856526 -20811479 - FLAM_C SINE Alu -2 141 7 2410 45 3 61 chr20 45856531 45856842 -20811163 - AluY SINE Alu -18 293 1 322 296 6 113 chr20 45856876 45857035 -20810970 - MIR3 SINE MIR -22 186 45 2373 109 0 0 chr20 45857804 45858106 -20809899 + AluSx SINE Alu 1 302 -10 314 233 35 47 chr20 45858126 45858212 -20809793 - MIR3 SINE MIR -31 177 93 1764 167 0 14 chr20 45858321 45858609 -20809396 + AluJo SINE Alu 11 294 -18 2060 82 34 21 chr20 45858737 45859028 -20808977 + AluSg SINE Alu 1 295 -15 215 223 75 43 chr20 45859201 45859295 -20808710 + MIR3 SINE MIR 77 173 -35 23 0 0 0 chr20 45860318 45860341 -20807664 + GC_rich Low_complexity Low_complexity 1 23 0 256 171 0 0 chr20 45860422 45860463 -20807542 - L2 LINE L2 -3 3269 3229 192 118 0 0 chr20 45860692 45860713 -20807292 + (TTCA)n Simple_repeat Simple_repeat 3 26 -10 1634 171 44 3 chr20 45860713 45861006 -20806999 - AluJo SINE Alu -7 305 1 192 118 0 0 chr20 45861006 45861018 -20806987 + (TTCA)n Simple_repeat Simple_repeat 25 36 0 207 279 122 41 chr20 45861042 45861189 -20806816 - MIR SINE MIR -1 261 103 440 225 183 26 chr20 45861341 45861532 -20806473 - Charlie8 DNA MER1_type -2151 266 46 189 267 0 33 chr20 45861937 45862027 -20805978 - L2 LINE L2 -315 2957 2871 216 0 0 0 chr20 45862126 45862150 -20805855 + (A)n Simple_repeat Simple_repeat 1 24 0 251 261 62 0 chr20 45862184 45862249 -20805756 + L2 LINE L2 3204 3272 0 1947 176 26 91 chr20 45862385 45862567 -20805438 - MLT1D LTR MaLR 0 505 313 2362 98 13 0 chr20 45862567 45862872 -20805133 + AluSx SINE Alu 2 310 -2 1947 176 26 91 chr20 45862872 45863229 -20804776 - MLT1D LTR MaLR -192 313 1 609 172 28 97 chr20 45863313 45863458 -20804547 + AluJo SINE Alu 2 136 -176 1830 158 0 35 chr20 45863466 45863776 -20804229 + AluJo SINE Alu 1 299 -13 1804 175 0 26 chr20 45863907 45864210 -20803795 - AluJo SINE Alu -11 301 7 800 112 0 0 chr20 45864273 45864380 -20803625 + AluSg/x SINE Alu 194 300 -12 2165 120 10 7 chr20 45864468 45864776 -20803229 - AluSc SINE Alu 0 309 1 2068 145 0 0 chr20 45864788 45865125 -20802880 - AluSx SINE Alu 0 337 1 877 174 0 0 chr20 45865131 45865269 -20802736 - FLAM_C SINE Alu -5 138 1 258 245 0 129 chr20 45865324 45865463 -20802542 - L1MC4a LINE L1 -1842 5966 5846 279 71 0 0 chr20 45865500 45865542 -20802463 + (TTTG)n Simple_repeat Simple_repeat 2 43 0 181 306 16 16 chr20 45865569 45865631 -20802374 - L2 LINE L2 -49 3223 3162 323 231 26 0 chr20 45865914 45865992 -20802013 + MIR SINE MIR 183 262 0 2221 114 0 0 chr20 45866049 45866338 -20801667 + AluSx SINE Alu 1 289 -23 230 376 18 0 chr20 45866553 45866662 -20801343 + L3 LINE CR1 1401 1511 -66 2046 123 7 0 chr20 45866925 45867201 -20800804 + AluSx SINE Alu 12 289 -23 2374 65 0 65 chr20 45867222 45867374 -20800631 + AluY SINE Alu 1 123 -188 2453 87 0 0 chr20 45867374 45867672 -20800333 + AluSq SINE Alu 5 302 -11 2374 65 0 65 chr20 45867672 45867841 -20800164 + AluY SINE Alu 123 301 -10 216 262 82 0 chr20 45867964 45868025 -20799980 + MIR SINE MIR 87 152 -56 2418 94 13 0 chr20 45868049 45868356 -20799649 + AluY SINE Alu 1 311 0 1907 123 26 0 chr20 45868373 45868642 -20799363 + AluSx SINE Alu 18 293 -19 245 186 170 33 chr20 45868775 45868858 -20799147 + MIR SINE MIR 86 156 -106 1994 153 30 0 chr20 45868858 45869159 -20798846 + AluJo SINE Alu 1 310 -2 245 186 170 33 chr20 45869159 45869198 -20798807 + MIR SINE MIR 156 231 -31 1960 138 115 23 chr20 45869309 45869336 -20798669 - MER95 LTR ERV -4 427 404 2331 92 0 0 chr20 45869336 45869640 -20798365 - AluSq SINE Alu -9 304 1 1960 138 115 23 chr20 45869640 45870003 -20798002 - MER95 LTR ERV -27 404 1 1739 103 118 8 chr20 45870754 45871016 -20796989 - AluSg1 SINE Alu -18 291 1 2191 101 3 0 chr20 45871139 45871435 -20796570 - AluSx SINE Alu -15 297 1 21 36 0 0 chr20 45871439 45871467 -20796538 + AT_rich Low_complexity Low_complexity 1 28 0 2083 119 3 3 chr20 45871570 45871872 -20796133 + AluSq SINE Alu 1 302 -11 246 155 52 35 chr20 45871872 45871930 -20796075 - MLT1L LTR MaLR 0 615 557 2240 98 0 3 chr20 45872097 45872402 -20795603 + AluSg SINE Alu 2 305 -5 2087 92 32 0 chr20 45872402 45872685 -20795320 + AluSg SINE Alu 1 292 -18 238 216 0 68 chr20 45872697 45872771 -20795234 - MLT1L LTR MaLR -362 253 185 305 174 35 47 chr20 45872931 45873017 -20794988 - MIR SINE MIR -108 154 70 2153 123 0 3 chr20 45873019 45873328 -20794677 - AluSx SINE Alu -4 308 1 252 220 0 0 chr20 45873710 45873760 -20794245 + L2 LINE L2 3262 3311 -2 252 254 30 30 chr20 45873824 45873891 -20794114 + MIR SINE MIR 40 106 -102 1259 110 9 55 chr20 45874002 45874221 -20793784 + AluSq SINE Alu 102 310 -3 250 308 128 53 chr20 45874333 45874560 -20793445 + MIR SINE MIR 8 251 -11 196 333 95 0 chr20 45874569 45874653 -20793352 - L2 LINE L2 -786 2528 2437 306 337 124 32 chr20 45874774 45875056 -20792949 - L2 LINE L2 -151 3121 2814 230 378 76 0 chr20 45875433 45875453 -20792552 - L2 LINE L2 -6 3266 3249 2268 75 3 0 chr20 45875453 45875745 -20792260 + AluSq SINE Alu 1 293 -20 230 378 76 0 chr20 45875745 45875843 -20792162 - L2 LINE L2 -23 3249 3139 608 253 108 25 chr20 45875889 45876130 -20791875 - MIR SINE MIR 0 262 2 189 290 11 65 chr20 45876175 45876268 -20791737 - L2 LINE L2 -188 3084 2997 231 194 0 65 chr20 45876313 45876375 -20791630 - MIR3 SINE MIR 0 208 151 722 217 16 0 chr20 45876434 45876563 -20791442 + FLAM_A SINE Alu 1 131 -2 2018 133 0 3 chr20 45876563 45876857 -20791148 + AluSx SINE Alu 1 293 -19 288 122 0 0 chr20 45877301 45877342 -20790663 - MER4E LTR ERV1 -73 693 653 2349 69 7 13 chr20 45877369 45877675 -20790330 - AluY SINE Alu -7 304 1 685 155 121 0 chr20 45877679 45877795 -20790210 - FLAM_C SINE Alu -3 130 1 1978 124 0 3 chr20 45877816 45878134 -20789871 - AluSg SINE Alu 0 317 1 841 173 0 54 chr20 45878162 45878330 -20789675 - FRAM SINE Alu -17 159 1 2118 78 3 20 chr20 45878341 45878678 -20789327 - AluSp SINE Alu 0 313 1 1932 154 0 0 chr20 45878679 45878972 -20789033 - AluJb SINE Alu -19 293 1 2174 92 9 19 chr20 45881575 45881890 -20786115 + AluSx SINE Alu 1 312 0 251 296 121 15 chr20 45882075 45882207 -20785798 + MIR3 SINE MIR 45 190 -18 1818 130 27 27 chr20 45882214 45882514 -20785491 - AluSp SINE Alu -13 300 1 2224 74 0 14 chr20 45882939 45883236 -20784769 + AluSg SINE Alu 8 300 -10 345 265 18 0 chr20 45883813 45883925 -20784080 + MIR SINE MIR 38 152 -62 328 271 0 0 chr20 45884002 45884099 -20783906 - MIR SINE MIR -62 146 69 2146 107 0 13 chr20 45884176 45884484 -20783521 - AluSx SINE Alu -8 304 1 409 274 55 41 chr20 45884547 45884766 -20783239 + L2 LINE L2 2975 3196 -117 244 163 23 0 chr20 45884759 45884802 -20783203 + MIR SINE MIR 210 253 -9 * 372 88 0 0 chr20 45886420 45886477 -20781528 + (CA)n Simple_repeat Simple_repeat 1 57 0 367 200 45 18 chr20 45886637 45886684 -20781321 - MER58C DNA MER1_type -2263 157 113 2446 61 3 0 chr20 45886684 45886994 -20781011 - AluY SINE Alu 0 311 1 367 200 45 18 chr20 45886994 45887056 -20780949 - MER58C DNA MER1_type -2307 113 45 2044 97 17 13 chr20 45887061 45887359 -20780646 + AluSq SINE Alu 1 299 -14 296 272 48 39 chr20 45887708 45887811 -20780194 + MIR SINE MIR 44 147 -115 2285 104 0 0 chr20 45887971 45888278 -20779727 + AluSx SINE Alu 1 307 -5 1605 146 80 4 chr20 45888287 45888562 -20779443 + AluJb SINE Alu 1 296 -16 201 289 0 0 chr20 45889636 45889688 -20778317 + L2 LINE L2 3262 3313 0 305 292 18 26 chr20 45890135 45890248 -20777757 + MIR SINE MIR 86 197 -65 2023 100 0 28 chr20 45890341 45890630 -20777375 - AluSx SINE Alu -11 301 21 235 250 33 0 chr20 45890630 45890690 -20777315 + MER5B DNA MER1_type 113 174 -4 603 295 6 12 chr20 45890708 45890881 -20777124 + MER5B DNA MER1_type 7 178 0 221 297 143 11 chr20 45891256 45891347 -20776658 + MIR SINE MIR 31 133 -75 224 318 56 32 chr20 45891426 45891552 -20776453 + L2 LINE L2 3142 3270 -2 1254 149 31 14 chr20 45891677 45891899 -20776106 - AluJo SINE Alu 0 312 87 186 71 0 0 chr20 45891902 45891930 -20776075 + (CTTG)n Simple_repeat Simple_repeat 2 29 0 2007 140 13 0 chr20 45891938 45892246 -20775759 - AluSx SINE Alu 0 312 1 207 348 156 0 chr20 45892343 45892478 -20775527 - MIR3 SINE MIR -19 189 34 261 119 0 0 chr20 45893915 45893957 -20774048 + (CTG)n Simple_repeat Simple_repeat 2 43 0 1917 138 44 3 chr20 45895805 45896103 -20771902 - AluSx SINE Alu -2 310 1 476 343 49 5 chr20 45896625 45896829 -20771176 - MIR SINE MIR -11 251 39 200 286 18 0 chr20 45896843 45896899 -20771106 + MIR3 SINE MIR 114 170 -38 1763 148 26 22 chr20 45897634 45897945 -20770060 - AluJo SINE Alu 0 312 1 1454 155 0 17 chr20 45897978 45898217 -20769788 - AluJo SINE Alu -77 235 1 2123 120 0 0 chr20 45898245 45898544 -20769461 + AluSq SINE Alu 1 299 -14 242 167 74 0 chr20 45898695 45898749 -20769256 - MER20B DNA MER1_type -662 121 64 2270 79 7 20 chr20 45898764 45899068 -20768937 - AluSg SINE Alu -9 301 2 182 319 213 0 chr20 45899468 45899562 -20768443 - MIR SINE MIR -79 129 16 693 208 84 7 chr20 45899718 45899872 -20768133 + MIR SINE MIR 4 169 -93 422 211 128 0 chr20 45901553 45901662 -20766343 - L2 LINE L2 -218 3054 2932 2431 52 13 3 chr20 45902429 45902737 -20765268 - AluY SINE Alu 0 311 1 1695 187 3 3 chr20 45902851 45903161 -20764844 - AluJo SINE Alu -2 310 1 633 243 29 23 chr20 45903189 45903362 -20764643 - MIR SINE MIR -42 220 47 250 345 36 9 chr20 45903357 45903396 -20764609 - MIR SINE MIR -48 214 178 * 961 155 160 6 chr20 45903396 45903577 -20764428 + MER3 DNA MER1_type 1 209 0 250 345 36 9 chr20 45903577 45903647 -20764358 - MIR SINE MIR -84 178 102 1949 145 13 0 chr20 45903648 45903952 -20764053 + AluJo SINE Alu 1 308 -4 2158 118 10 0 chr20 45903952 45904257 -20763748 + AluSq SINE Alu 1 308 -5 202 250 79 13 chr20 45904318 45904394 -20763611 + MIR SINE MIR 54 134 -128 1773 123 75 0 chr20 45905242 45905510 -20762495 - AluSg SINE Alu -18 292 5 1662 145 12 89 chr20 45905525 45905862 -20762143 - AluJb SINE Alu -1 311 1 321 320 20 0 chr20 45905930 45906030 -20761975 - MIR SINE MIR -24 238 137 689 115 9 62 chr20 45906076 45906189 -20761816 + AluSg/x SINE Alu 184 290 -19 776 189 0 8 chr20 45906203 45906330 -20761675 - FLAM_C SINE Alu -16 127 2 563 244 8 0 chr20 45906332 45906459 -20761546 - MIR SINE MIR -114 148 21 1759 163 7 7 chr20 45906515 45906816 -20761189 + AluJb SINE Alu 2 302 -10 222 222 19 0 chr20 45907658 45907712 -20760293 - L2 LINE L2 -213 3059 3005 614 236 83 50 chr20 45907740 45907939 -20760066 - MIR SINE MIR -11 251 41 926 128 0 8 chr20 45907939 45908072 -20759933 - FLAM_C SINE Alu 0 133 2 614 236 83 50 chr20 45908072 45908113 -20759892 - MIR SINE MIR -221 41 3 509 259 22 0 chr20 45908136 45908271 -20759734 + MIR SINE MIR 69 206 -56 582 240 104 11 chr20 45908703 45908886 -20759119 + MIR SINE MIR 63 262 0 2301 88 0 3 chr20 45908940 45909247 -20758758 + AluSx SINE Alu 1 306 -6 2106 98 6 29 chr20 45909379 45909695 -20758310 + AluSc SINE Alu 1 309 0 280 266 97 52 chr20 45909784 45909938 -20758067 - MIR SINE MIR -55 207 47 23 24 0 24 chr20 45910835 45910850 -20757155 + AT_rich Low_complexity Low_complexity 1 15 -25 2052 116 0 7 chr20 45910850 45911144 -20756861 + AluSx SINE Alu 1 292 -20 23 24 0 24 chr20 45911144 45911169 -20756836 + AT_rich Low_complexity Low_complexity 15 40 0 656 285 76 60 chr20 45911244 45911295 -20756710 - MIR SINE MIR -3 259 210 2326 87 0 0 chr20 45911295 45911595 -20756410 - AluSc SINE Alu -9 300 1 656 285 76 60 chr20 45911595 45911792 -20756213 - MIR SINE MIR -52 210 7 263 346 29 10 chr20 45912116 45912220 -20755785 - MIR SINE MIR -77 185 80 2221 86 3 10 chr20 45912664 45912966 -20755039 + AluSx SINE Alu 2 301 -11 285 234 42 13 chr20 45913888 45913984 -20754021 - MIR3 SINE MIR -33 175 95 334 276 16 39 chr20 45914743 45914870 -20753135 + MIR SINE MIR 47 170 -92 2441 54 0 6 chr20 45915130 45915443 -20752562 - AluY SINE Alu 0 311 1 225 94 0 0 chr20 45915491 45915523 -20752482 + (CCCCCA)n Simple_repeat Simple_repeat 1 32 0 269 186 0 0 chr20 45915667 45915710 -20752295 - MER81 DNA DNA -1 113 71 24 0 0 0 chr20 45915763 45915787 -20752218 + AT_rich Low_complexity Low_complexity 1 24 0 1982 128 3 0 chr20 45915787 45916075 -20751930 - AluSx SINE Alu -23 289 1 197 0 71 0 chr20 45916075 45916103 -20751902 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 2146 92 0 3 chr20 45916103 45916386 -20751619 - AluSq SINE Alu -31 282 1 1887 125 3 17 chr20 45916391 45916678 -20751327 - AluJb SINE Alu -18 294 12 207 299 52 13 chr20 45916764 45916841 -20751164 - MIR SINE MIR -67 195 116 397 309 175 5 chr20 45916901 45917118 -20750887 + MIR SINE MIR 5 258 -4 2246 101 10 0 chr20 45917294 45917602 -20750403 - AluSx SINE Alu -1 311 1 912 183 110 133 chr20 45917639 45917774 -20750231 - AluJo SINE Alu -8 294 157 1797 166 0 3 chr20 45917774 45918064 -20749941 - AluJb SINE Alu 0 312 24 912 183 110 133 chr20 45918064 45918093 -20749912 - AluJo SINE Alu -145 157 129 1959 97 80 3 chr20 45918093 45918381 -20749624 - AluSg SINE Alu 0 310 1 912 183 110 133 chr20 45918381 45918516 -20749489 - AluJo SINE Alu -173 129 1 750 208 6 6 chr20 45918676 45918835 -20749170 + MIR SINE MIR 94 252 -10 1044 237 170 15 chr20 45918859 45919105 -20748900 + L2 LINE L2 2741 2948 -365 2082 120 7 0 chr20 45919105 45919406 -20748599 - AluSx SINE Alu -8 304 2 1044 237 170 15 chr20 45919406 45919652 -20748353 + L2 LINE L2 2948 3312 -1 2137 117 3 0 chr20 45919772 45920070 -20747935 + AluSq SINE Alu 1 299 -14 1794 168 0 23 chr20 45920336 45920646 -20747359 - AluJo SINE Alu -9 303 1 537 235 23 0 chr20 45920870 45921002 -20747003 - MER58B DNA MER1_type -5 336 202 243 235 0 0 chr20 45920995 45921046 -20746959 - MER58B DNA MER1_type -290 51 1 * 1025 145 6 6 chr20 45921076 45921235 -20746770 + FRAM SINE Alu 1 159 -17 396 225 25 42 chr20 45921237 45921357 -20746648 + MIR SINE MIR 109 226 -36 736 140 0 0 chr20 45921373 45921480 -20746525 - FLAM_C SINE Alu -36 107 1 1753 175 0 10 chr20 45921530 45921821 -20746184 - AluJo SINE Alu -24 288 1 435 228 41 55 chr20 45921824 45921969 -20746036 - MIR SINE MIR -50 212 70 410 283 28 0 chr20 45921996 45922102 -20745903 - MIR SINE MIR -65 197 89 797 281 64 36 chr20 45923452 45923610 -20744395 + L2 LINE L2 2375 2527 -786 1921 137 18 0 chr20 45923610 45923887 -20744118 + AluJb SINE Alu 16 297 -15 797 281 64 36 chr20 45923887 45924496 -20743509 + L2 LINE L2 2527 3305 -8 2291 100 0 0 chr20 45924503 45924802 -20743203 + AluSg SINE Alu 1 299 -11 2087 101 0 11 chr20 45925134 45925420 -20742585 + AluSx SINE Alu 14 296 -16 1806 230 54 6 chr20 45925420 45925903 -20742102 + L1ME1 LINE L1 5595 6100 -66 2018 98 22 0 chr20 45925907 45926214 -20741791 - AluSg SINE Alu 0 313 1 754 169 62 8 chr20 45926224 45926354 -20741651 - AluJo SINE Alu -175 137 1 963 84 70 0 chr20 45926363 45926530 -20741475 - AluSq SINE Alu 0 310 134 1973 122 7 0 chr20 45926530 45926816 -20741189 - AluSp SINE Alu -9 304 17 303 238 0 0 chr20 45926818 45926881 -20741124 + L1MB7 LINE L1 6113 6175 -9 2042 122 7 0 chr20 45927139 45927427 -20740578 + AluSc SINE Alu 1 290 -19 341 339 128 24 chr20 45927576 45927912 -20740093 + L2 LINE L2 2853 3223 -49 1952 144 0 0 chr20 45928456 45928747 -20739258 + AluSx SINE Alu 1 291 -21 481 208 20 0 chr20 45928751 45928852 -20739153 - MER45A DNA AcHobo -21 157 55 1529 155 74 30 chr20 45928864 45929160 -20738845 - AluJo SINE Alu -1 311 3 2021 136 0 3 chr20 45929455 45929756 -20738249 + AluSx SINE Alu 1 300 -12 626 295 113 60 chr20 45929802 45930103 -20737902 - L2 LINE L2 -5 3267 2938 1406 180 88 27 chr20 45930103 45930397 -20737608 + AluJb SINE Alu 1 312 0 626 295 113 60 chr20 45930397 45930495 -20737510 - L2 LINE L2 -334 2938 2847 377 357 11 16 chr20 45930588 45930773 -20737232 - L2 LINE L2 -510 2804 2621 741 186 23 0 chr20 45930781 45930910 -20737095 + FLAM_C SINE Alu 1 132 -1 1942 146 10 0 chr20 45930924 45931218 -20736787 + AluSx SINE Alu 1 297 -15 2292 98 0 0 chr20 45931218 45931524 -20736481 + AluSx SINE Alu 1 307 -5 660 259 76 73 chr20 45931571 45931968 -20736037 + L1ME3A LINE L1 5745 6142 -28 2222 105 3 7 chr20 45931972 45932276 -20735729 - AluSg SINE Alu -7 303 1 1977 145 0 3 chr20 45932289 45932579 -20735426 - AluJb SINE Alu -23 289 1 1384 142 78 34 chr20 45932582 45932850 -20735155 - AluJo SINE Alu -27 285 6 2080 107 3 20 chr20 45932866 45933166 -20734839 - AluSc SINE Alu -14 295 1 711 217 46 51 chr20 45933185 45933208 -20734797 + AluJo SINE Alu 118 140 -172 1847 84 0 84 chr20 45933208 45933494 -20734511 + AluSx SINE Alu 37 298 -14 711 217 46 51 chr20 45933494 45933645 -20734360 + AluJo SINE Alu 140 291 -21 2201 108 0 0 chr20 45933709 45934005 -20734000 - AluSq SINE Alu -17 296 1 2376 72 3 0 chr20 45934126 45934431 -20733574 + AluSp SINE Alu 1 306 -7 239 298 14 83 chr20 45934513 45934674 -20733331 + MIR SINE MIR 5 153 -62 2283 68 0 10 chr20 45934798 45935093 -20732912 + AluSg SINE Alu 1 292 -18 2209 76 0 3 chr20 45935220 45935511 -20732494 - AluSx SINE Alu -22 290 1 575 323 78 0 chr20 45935768 45935985 -20732020 - MIR SINE MIR -17 245 12 30 27 0 0 chr20 45937415 45937452 -20730553 + GC_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr20 45937464 45937487 -20730518 + GC_rich Low_complexity Low_complexity 1 23 0 233 243 35 125 chr20 45938074 45938218 -20729787 + MER5A DNA MER1_type 59 189 0 2318 68 0 46 chr20 45938495 45938821 -20729184 - AluY SINE Alu 0 311 1 1109 153 81 59 chr20 45938821 45938981 -20729024 - AluJo SINE Alu -15 297 129 1872 143 16 3 chr20 45938981 45939288 -20728717 + AluSx SINE Alu 1 311 -1 1109 153 81 59 chr20 45939288 45939349 -20728656 - AluJo SINE Alu -183 129 71 858 201 6 12 chr20 45939403 45939572 -20728433 - MER45A DNA AcHobo 0 178 11 441 252 118 56 chr20 45940843 45941131 -20726874 - L2 LINE L2 -28 3244 2939 529 315 0 0 chr20 45941726 45941869 -20726136 - L2 LINE L2 -9 3263 3121 206 347 82 10 chr20 45941855 45941953 -20726052 - L2 LINE L2 -12 3260 3156 * 307 361 69 0 chr20 45942231 45942375 -20725630 - MIR SINE MIR -100 162 9 404 330 99 27 chr20 45942483 45942704 -20725301 - MIR SINE MIR -6 256 20 453 157 0 0 chr20 45943640 45943710 -20724295 + AluJ/FRAM SINE Alu 225 294 -18 1902 131 3 22 chr20 45943776 45944090 -20723915 - AluSg SINE Alu -2 308 1 844 150 0 0 chr20 45944092 45944219 -20723786 - AluJo/FLAM SINE Alu -175 127 1 2456 64 0 10 chr20 45944294 45944606 -20723399 - AluSc SINE Alu 0 309 1 2207 118 0 0 chr20 45944642 45944947 -20723058 - AluSp SINE Alu -8 305 1 1548 154 64 57 chr20 45944947 45945245 -20722760 - AluJb SINE Alu -12 300 1 223 290 72 0 chr20 45946128 45946197 -20721808 + L2 LINE L2 3007 3080 -192 198 293 91 30 chr20 45946793 45946892 -20721113 + L2 LINE L2 3169 3273 -40 572 316 61 4 chr20 45946912 45947143 -20720862 - MIR SINE MIR -7 255 12 329 272 0 19 chr20 45948789 45948892 -20719113 + MIR SINE MIR 29 129 -133 186 299 30 15 chr20 45953162 45953229 -20714776 + MIR3 SINE MIR 120 187 -21 2201 75 10 7 chr20 45953230 45953524 -20714481 - AluSp SINE Alu -18 295 1 1780 185 36 12 chr20 45953776 45954105 -20713900 - MER1B DNA MER1_type 0 337 1 238 370 47 62 chr20 45954158 45954434 -20713571 + L2 LINE L2 3001 3272 0 395 266 76 57 chr20 45955660 45955818 -20712187 + MIR3 SINE MIR 18 178 -30 749 233 47 0 chr20 45956497 45956690 -20711315 + MER20 DNA MER1_type 18 219 0 541 340 141 38 chr20 45956874 45957103 -20710902 + L1ME4a LINE L1 5174 5378 -743 1863 117 62 0 chr20 45957103 45957376 -20710629 - AluJb SINE Alu -7 305 16 541 340 141 38 chr20 45957376 45957401 -20710604 + L1ME4a LINE L1 5378 5399 -722 2207 86 13 16 chr20 45957401 45957705 -20710300 + AluY SINE Alu 1 303 -8 541 340 141 38 chr20 45957705 45957869 -20710136 + L1ME4a LINE L1 5399 5545 -576 2084 131 0 3 chr20 45957869 45958166 -20709839 + AluSx SINE Alu 1 296 -16 541 340 141 38 chr20 45958166 45958552 -20709453 + L1ME4a LINE L1 5545 6080 -41 2293 91 10 0 chr20 45958552 45958860 -20709145 - AluSp SINE Alu -2 311 1 541 340 141 38 chr20 45958860 45958904 -20709101 + L1ME4a LINE L1 6080 6118 -3 301 322 22 0 chr20 45958914 45959004 -20709001 + L1M4 LINE L1 4771 4862 -1284 293 280 83 32 chr20 45959051 45959269 -20708736 + L1M4 LINE L1 4939 5167 -979 266 283 50 20 chr20 45959777 45959876 -20708129 + L2 LINE L2 3132 3233 -39 529 347 8 37 chr20 45960312 45960383 -20707622 - MIR SINE MIR -27 235 163 1980 135 14 0 chr20 45960383 45960679 -20707326 - AluSx SINE Alu -12 300 1 529 347 8 37 chr20 45960679 45960849 -20707156 - MIR SINE MIR -99 163 1 919 266 75 68 chr20 45960880 45961362 -20706643 + MLT1J LTR MaLR 2 486 -25 190 319 35 78 chr20 45961377 45961493 -20706512 - MIR SINE MIR -44 218 108 314 348 96 0 chr20 45962239 45962374 -20705631 - MIR SINE MIR -68 194 47 1306 152 4 59 chr20 45963484 45963721 -20704284 + AluJb SINE Alu 57 280 -32 24 32 0 0 chr20 45963820 45963851 -20704154 + AT_rich Low_complexity Low_complexity 1 31 0 230 301 0 68 chr20 45964978 45965081 -20702924 + MIR SINE MIR 113 208 -54 405 220 48 143 chr20 45965082 45965134 -20702871 - MER91B DNA MER1_type 0 190 135 2323 103 3 0 chr20 45965134 45965445 -20702560 - AluSp SINE Alu -1 312 1 405 220 48 143 chr20 45965445 45965601 -20702404 - MER91B DNA MER1_type -55 135 2 411 331 0 8 chr20 45966550 45966683 -20701322 + MIR SINE MIR 16 147 -61 418 191 61 76 chr20 45966923 45967054 -20700951 + L1ME3A LINE L1 6035 6163 -7 1933 120 33 0 chr20 45967087 45967403 -20700602 + AluSq SINE Alu 1 325 0 303 281 122 55 chr20 45967451 45967615 -20700390 - MIR SINE MIR -73 189 15 395 305 25 0 chr20 45968316 45968434 -20699571 - MER91B DNA MER1_type -5 185 65 516 202 40 0 chr20 45968435 45968559 -20699446 + MER33 DNA MER1_type 1 129 -195 1022 84 8 0 chr20 45968579 45968710 -20699295 - AluY SINE Alu -179 132 1 711 186 0 0 chr20 45968758 45968871 -20699134 + AluJo SINE Alu 1 113 -199 2318 99 0 6 chr20 45968871 45969184 -20698821 - AluSx SINE Alu 0 312 2 1337 142 75 0 chr20 45969185 45969397 -20698608 - AluJb SINE Alu 0 312 85 911 214 6 0 chr20 45969397 45969570 -20698435 + AluJo SINE Alu 104 277 -35 256 218 51 39 chr20 45969598 45969676 -20698329 - MER91B DNA MER1_type -111 79 1 824 180 5 2 chr20 45971130 45971348 -20696657 + AluJo SINE Alu 14 269 -43 711 267 50 5 chr20 45971348 45971569 -20696436 + MIR SINE MIR 32 262 0 380 258 150 18 chr20 45971566 45971733 -20696272 - MIR SINE MIR -13 249 61 * 637 295 52 44 chr20 45972286 45972639 -20695366 + L2 LINE L2 2920 3271 -1 975 216 20 20 chr20 45972719 45972923 -20695082 - MIR SINE MIR 0 262 59 900 98 8 8 chr20 45973091 45973224 -20694781 - FLAM_C SINE Alu 0 133 1 367 291 122 2 chr20 45973259 45973435 -20694570 + MIR SINE MIR 7 238 -24 225 271 17 0 chr20 45975039 45975098 -20692907 - MIR SINE MIR -64 144 85 1994 138 0 30 chr20 45975212 45975517 -20692488 + AluJb SINE Alu 1 296 -16 2152 103 7 7 chr20 45975776 45976076 -20691929 + AluSp SINE Alu 1 300 -13 1897 111 80 3 chr20 45976113 45976402 -20691603 + AluSq SINE Alu 3 313 0 510 174 0 20 chr20 45976823 45976921 -20691084 + FRAM SINE Alu 69 164 -12 361 172 0 0 chr20 45977223 45977287 -20690718 - FLAM SINE Alu -7 126 63 34 0 0 0 chr20 45977831 45977865 -20690140 + AT_rich Low_complexity Low_complexity 1 34 0 1852 139 15 11 chr20 45977865 45978131 -20689874 - AluSx SINE Alu -45 267 1 346 250 24 25 chr20 45978634 45978785 -20689220 - MIR SINE MIR -65 143 19 2021 116 46 16 chr20 45978785 45979088 -20688917 + AluSx SINE Alu 1 312 0 679 246 73 42 chr20 45979101 45979292 -20688713 - MIR SINE MIR -26 236 40 2290 95 3 7 chr20 45979295 45979589 -20688416 + AluSp SINE Alu 1 293 -20 24 32 0 0 chr20 45982208 45982239 -20685766 + AT_rich Low_complexity Low_complexity 1 31 0 185 300 0 20 chr20 45982241 45982291 -20685714 - MIR SINE MIR -208 54 6 423 197 17 77 chr20 45982358 45982475 -20685530 - MIR SINE MIR -58 150 41 2449 71 0 7 chr20 45982511 45982808 -20685197 - AluSg SINE Alu -15 295 1 1205 192 0 14 chr20 45982817 45983066 -20684939 - AluJb SINE Alu 0 330 85 1392 138 9 18 chr20 45983125 45983343 -20684662 - AluJb SINE Alu -14 298 83 2102 109 32 0 chr20 45983343 45983628 -20684377 - AluSx SINE Alu -18 294 1 402 237 56 22 chr20 45983651 45983807 -20684198 - MIR SINE MIR -63 145 20 2355 113 3 0 chr20 45984128 45984439 -20683566 + AluSx SINE Alu 1 312 0 237 266 32 43 chr20 45984586 45984680 -20683325 + L2 LINE L2 3220 3312 -1 198 171 0 0 chr20 45984688 45984723 -20683282 - MIR SINE MIR -61 147 113 1732 155 10 41 chr20 45984790 45985081 -20682924 + AluJo SINE Alu 1 282 -30 1447 208 57 69 chr20 45985116 45985593 -20682412 - LTR33A LTR ERVL -49 474 4 208 253 108 36 chr20 45985716 45985799 -20682206 + L2 LINE L2 3019 3107 -165 207 133 0 0 chr20 45986000 45986030 -20681975 + MIR SINE MIR 117 146 -116 402 262 257 15 chr20 45986056 45986262 -20681743 + MIR SINE MIR 7 262 0 294 139 0 0 chr20 45986327 45986394 -20681611 - AluSp/q SINE Alu 0 307 241 896 149 29 69 chr20 45986394 45986569 -20681436 - AluJo SINE Alu -144 168 1 356 253 0 0 chr20 45986570 45986653 -20681352 + L2 LINE L2 3176 3258 -14 1405 205 17 37 chr20 45986656 45986814 -20681191 - AluJb SINE Alu -21 291 140 2875 16 0 0 chr20 45986814 45987123 -20680882 - AluY SINE Alu -2 309 1 1405 205 17 37 chr20 45987123 45987261 -20680744 - AluJb SINE Alu -172 140 1 559 278 102 14 chr20 45987537 45987753 -20680252 - MIR SINE MIR -8 254 20 1170 154 221 32 chr20 45987758 45988011 -20679994 - AluSx SINE Alu -1 301 1 205 269 0 0 chr20 45988049 45988101 -20679904 + GA-rich Low_complexity Low_complexity 5 56 0 362 313 95 20 chr20 45988337 45988623 -20679382 + MIR SINE MIR 35 245 -17 234 274 32 0 chr20 45988607 45988669 -20679336 + MIR SINE MIR 12 75 -187 * 1064 84 22 17 chr20 45988685 45988864 -20679141 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1931 127 0 36 chr20 45988875 45989182 -20678823 - AluSx SINE Alu -15 297 2 325 299 49 42 chr20 45989215 45989359 -20678646 + MIR SINE MIR 98 242 -20 604 302 42 5 chr20 45989386 45989598 -20678407 - MIR SINE MIR -2 260 41 1560 127 88 46 chr20 45990057 45990340 -20677665 + AluJo SINE Alu 1 295 -17 804 87 0 10 chr20 45990362 45990466 -20677539 + AluSq/x SINE Alu 1 103 -209 2067 143 0 3 chr20 45990496 45990796 -20677209 - AluSx SINE Alu -13 299 1 291 239 57 11 chr20 45990831 45990919 -20677086 - L1MB5 LINE L1 -107 6067 5986 2043 152 0 13 chr20 45990925 45991241 -20676764 - AluSx SINE Alu 0 312 1 1240 113 0 6 chr20 45991274 45991442 -20676563 - FRAM SINE Alu -14 162 1 2197 118 11 0 chr20 45991521 45991808 -20676197 + AluSx SINE Alu 1 290 -22 184 360 90 9 chr20 45991879 45991990 -20676015 + L2 LINE L2 3185 3304 -9 495 304 36 8 chr20 45992025 45992275 -20675730 - L1M4 LINE L1 -1091 5055 4799 196 295 0 16 chr20 45992281 45992342 -20675663 - MER5A DNA MER1_type -109 80 21 233 83 56 0 chr20 45992297 45992333 -20675672 + MER5B DNA MER1_type 125 162 -16 2277 91 3 0 chr20 45992547 45992832 -20675173 - AluSp SINE Alu -11 302 17 468 169 0 100 chr20 45992900 45992990 -20675015 - L1ME3A LINE L1 -8 6162 6087 1138 176 119 90 chr20 45992990 45993262 -20674743 - MLT1C LTR MaLR 0 467 175 2388 107 0 0 chr20 45993262 45993572 -20674433 - AluSx SINE Alu -2 310 1 1138 176 119 90 chr20 45993572 45993753 -20674252 - MLT1C LTR MaLR -292 175 1 468 169 0 100 chr20 45993753 45993792 -20674213 - L1ME3A LINE L1 -83 6087 6046 1106 152 12 0 chr20 45993795 45993966 -20674039 + FRAM SINE Alu 1 173 -3 1764 185 30 7 chr20 45994065 45994367 -20673638 - AluJo SINE Alu -3 309 1 607 245 84 75 chr20 45994371 45994669 -20673336 - L1MC4 LINE L1 0 8042 7737 2112 117 26 13 chr20 45994669 45994977 -20673028 + AluSx SINE Alu 1 312 0 607 245 84 75 chr20 45994977 45995094 -20672911 - L1MC4 LINE L1 -305 7737 7623 180 0 0 0 chr20 45995115 45995135 -20672870 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2026 128 4 0 chr20 45995138 45995412 -20672593 - AluSx SINE Alu -37 275 1 631 177 0 57 chr20 45995462 45995603 -20672402 + FLAM_A SINE Alu 1 133 0 479 126 0 23 chr20 45995610 45995697 -20672308 + (GGAGA)n Simple_repeat Simple_repeat 5 89 0 192 347 20 0 chr20 45996147 45996245 -20671760 + L2 LINE L2 2958 3057 -215 1164 210 30 0 chr20 45996282 45996515 -20671490 + MIR SINE MIR 23 262 0 1508 123 0 175 chr20 45996517 45996737 -20671268 - AluSx SINE Alu -1 301 169 2490 63 3 3 chr20 45996737 45997036 -20670969 - AluSp SINE Alu -14 299 1 1508 123 0 175 chr20 45997036 45997180 -20670825 - AluSx SINE Alu -133 169 1 1014 177 0 12 chr20 45997212 45997376 -20670629 + FRAM SINE Alu 1 162 -14 363 323 18 80 chr20 45997511 45997737 -20670268 - L2 LINE L2 -165 3107 2896 358 297 94 22 chr20 45997813 45997951 -20670054 + L2 LINE L2 3123 3270 -2 693 92 0 0 chr20 45998224 45998322 -20669683 + (TTCC)n Simple_repeat Simple_repeat 3 100 0 2317 89 7 0 chr20 45998322 45998604 -20669401 - AluSx SINE Alu -27 285 2 2303 77 26 32 chr20 45998606 45998916 -20669089 - AluSx SINE Alu -4 308 1 1794 170 0 48 chr20 45998920 45999231 -20668774 - AluJb SINE Alu -16 296 1 599 187 115 0 chr20 45999241 45999399 -20668606 - MER5A DNA MER1_type -7 182 4 184 322 0 0 chr20 45999476 45999535 -20668470 - L2 LINE L2 -506 2808 2750 2379 129 13 8 chr20 45999637 46000023 -20667982 + MLT1B LTR MaLR 1 388 -2 341 313 15 8 chr20 46000329 46000460 -20667545 - LTR67 LTR ERVL 0 557 426 682 245 144 56 chr20 46000698 46001004 -20667001 + MLT1H1 LTR MaLR 3 335 -220 993 100 0 8 chr20 46001019 46001149 -20666856 - FLAM_C SINE Alu -9 134 6 2685 185 21 37 chr20 46001161 46001735 -20666270 - MER74B LTR ERVL 0 622 58 1928 158 0 10 chr20 46001735 46002039 -20665966 + AluJo SINE Alu 1 301 -11 650 254 45 32 chr20 46002053 46002273 -20665732 + MLT1H1 LTR MaLR 332 554 -1 395 229 77 16 chr20 46002374 46002527 -20665478 - MIR SINE MIR -35 173 1 673 237 23 45 chr20 46003458 46003635 -20664370 + MER5B DNA MER1_type 6 178 0 1907 134 54 0 chr20 46003817 46004094 -20663911 + AluJb SINE Alu 1 292 -20 333 295 43 29 chr20 46004255 46004394 -20663611 + MIR SINE MIR 5 145 -117 727 166 50 61 chr20 46004447 46004479 -20663526 - MER5A DNA MER1_type -10 179 148 2180 148 0 0 chr20 46004479 46004783 -20663222 + AluSx SINE Alu 1 304 -8 2333 78 0 3 chr20 46004784 46005090 -20662915 + AluSg SINE Alu 1 305 0 727 166 50 61 chr20 46005090 46005235 -20662770 - MER5A DNA MER1_type -40 149 1 2243 109 0 29 chr20 46005652 46005965 -20662040 - AluSx SINE Alu -8 304 1 1958 146 7 13 chr20 46006172 46006480 -20661525 + AluJb SINE Alu 1 306 -6 329 207 115 11 chr20 46006706 46006793 -20661212 + MIR SINE MIR 25 120 -88 189 0 0 0 chr20 46006862 46006883 -20661122 + (TG)n Simple_repeat Simple_repeat 2 22 0 807 271 9 14 chr20 46006884 46007102 -20660903 - MIR SINE MIR -25 237 21 982 220 33 14 chr20 46007926 46008171 -20659834 - MIR SINE MIR -5 257 5 250 182 18 18 chr20 46008162 46008217 -20659788 + MIR3 SINE MIR 108 162 -46 * 289 352 23 16 chr20 46008272 46008400 -20659605 + L2 LINE L2 3141 3269 -3 934 119 0 62 chr20 46008491 46008651 -20659354 + MER20 DNA MER1_type 12 161 -58 651 285 45 20 chr20 46009039 46009285 -20658720 + MIR SINE MIR 11 262 0 390 195 0 13 chr20 46009292 46009369 -20658636 - MIR SINE MIR -95 113 38 188 97 65 0 chr20 46009474 46009505 -20658500 + L2 LINE L2 3263 3295 -18 2189 114 7 7 chr20 46009515 46009822 -20658183 + AluSx SINE Alu 1 307 -5 283 336 0 35 chr20 46010014 46010130 -20657875 - MIR3 SINE MIR -23 185 74 820 199 0 27 chr20 46010180 46010326 -20657679 - AluJb SINE Alu -34 278 137 330 302 65 41 chr20 46010362 46010531 -20657474 - MIR SINE MIR -3 259 87 423 0 0 0 chr20 46011105 46011152 -20656853 + (CA)n Simple_repeat Simple_repeat 1 47 0 1420 182 4 9 chr20 46011838 46012069 -20655936 + AluJo SINE Alu 2 231 -81 180 0 0 0 chr20 46012654 46012674 -20655331 + (A)n Simple_repeat Simple_repeat 1 20 0 293 265 44 29 chr20 46013094 46013230 -20654775 - MER91A DNA MER1_type -57 139 2 434 153 90 27 chr20 46013700 46013811 -20654194 + MIR3 SINE MIR 48 165 -43 1808 141 34 13 chr20 46015145 46015443 -20652562 + AluJo SINE Alu 3 306 -6 230 282 99 0 chr20 46016190 46016261 -20651744 - MER91A DNA MER1_type -3 193 116 25 51 0 0 chr20 46016611 46016650 -20651355 + GC_rich Low_complexity Low_complexity 1 39 0 244 308 19 29 chr20 46016932 46017036 -20650969 - MIR SINE MIR -90 118 16 225 259 19 0 chr20 46017070 46017124 -20650881 - L2 LINE L2 -2 3270 3216 341 143 36 83 chr20 46017141 46017225 -20650780 + MIR SINE MIR 72 151 -111 961 326 94 13 chr20 46017482 46017771 -20650234 + L2 LINE L2 2810 3153 -160 2619 61 0 6 chr20 46017771 46018083 -20649922 - AluSg SINE Alu 0 310 1 961 326 94 13 chr20 46018083 46018259 -20649746 + L2 LINE L2 3153 3313 0 230 258 0 15 chr20 46018323 46018389 -20649616 - L2 LINE L2 -1 3312 3248 234 128 0 0 chr20 46018905 46018944 -20649061 + (TATG)n Simple_repeat Simple_repeat 2 40 0 2059 68 30 19 chr20 46019028 46019293 -20648712 + AluY SINE Alu 1 268 -43 605 52 0 0 chr20 46019293 46019370 -20648635 + AluY SINE Alu 219 295 -16 237 281 90 22 chr20 46019373 46019462 -20648543 - MIR SINE MIR -44 218 124 381 200 12 12 chr20 46019473 46019558 -20648447 - L2 LINE L2 -1 3312 3228 251 269 39 13 chr20 46019552 46019630 -20648375 - MER5A DNA MER1_type -9 180 101 * 189 147 0 0 chr20 46019718 46019752 -20648253 + (TG)n Simple_repeat Simple_repeat 2 35 0 354 263 35 2 chr20 46019913 46020035 -20647970 + L1MC/D LINE L1 5665 5786 -392 540 244 6 85 chr20 46020066 46020277 -20647728 - MIR SINE MIR -28 234 41 1369 284 92 31 chr20 46020568 46021374 -20646631 + L2 LINE L2 1598 2467 -847 414 125 69 0 chr20 46021413 46021485 -20646520 - MER20 DNA MER1_type -2 217 141 623 219 8 0 chr20 46021681 46021800 -20646205 - MER20 DNA MER1_type -99 120 1 1983 189 67 73 chr20 46021804 46021906 -20646099 - L1ME3A LINE L1 -18 6152 6051 2021 138 10 10 chr20 46021906 46022218 -20645787 + AluSx SINE Alu 1 312 0 1983 189 67 73 chr20 46022218 46022310 -20645695 - L1ME3A LINE L1 -119 6051 5960 1934 111 0 0 chr20 46022310 46022572 -20645433 - AluSg1 SINE Alu -45 264 3 1983 189 67 73 chr20 46022572 46023005 -20645000 - L1ME3A LINE L1 -210 5960 5528 1331 285 122 6 chr20 46023012 46023770 -20644235 + L2 LINE L2 2454 3299 -14 234 0 0 0 chr20 46023772 46023798 -20644207 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 22 56 0 0 chr20 46023962 46023998 -20644007 + GC_rich Low_complexity Low_complexity 1 36 0 219 247 10 41 chr20 46024232 46024329 -20643676 + (CGGGG)n Simple_repeat Simple_repeat 1 94 0 714 55 0 0 chr20 46025276 46025367 -20642638 + (GGA)n Simple_repeat Simple_repeat 1 91 0 257 275 14 14 chr20 46025442 46025511 -20642494 - MIR3 SINE MIR -27 181 113 385 363 100 25 chr20 46025596 46026233 -20641772 + L2 LINE L2 2387 3266 -6 261 0 0 0 chr20 46026474 46026503 -20641502 + (TG)n Simple_repeat Simple_repeat 2 30 0 540 315 65 5 chr20 46027332 46027516 -20640489 + MIR3 SINE MIR 12 206 -2 211 200 67 0 chr20 46027555 46027600 -20640405 + MIR SINE MIR 106 153 -109 207 245 0 20 chr20 46027784 46027833 -20640172 + C-rich Low_complexity Low_complexity 4 51 0 300 368 75 17 chr20 46028346 46028520 -20639485 + MIR3 SINE MIR 10 193 -15 369 288 34 40 chr20 46028958 46029135 -20638870 - MIR3 SINE MIR 0 208 33 261 0 0 0 chr20 46029961 46029990 -20638015 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 444 286 16 8 chr20 46030090 46030216 -20637789 + MIR SINE MIR 21 147 -61 600 84 0 0 chr20 46032191 46032274 -20635731 + (TG)n Simple_repeat Simple_repeat 2 84 0 529 261 90 37 chr20 46034877 46035065 -20632940 - MIR SINE MIR -53 209 12 868 319 91 48 chr20 46035794 46036844 -20631161 + L2 LINE L2 2167 3272 0 255 362 126 0 chr20 46037070 46037197 -20630808 - MIR SINE MIR -11 251 109 202 338 7 32 chr20 46037881 46038035 -20629970 + GA-rich Low_complexity Low_complexity 1 150 0 421 311 24 55 chr20 46038652 46038883 -20629122 - MIR SINE MIR -30 232 15 267 363 15 37 chr20 46039757 46039892 -20628113 - L2 LINE L2 -2 3270 3139 471 260 133 33 chr20 46039916 46040097 -20627908 - MIR SINE MIR -4 258 60 322 333 59 26 chr20 46040419 46040518 -20627487 - MIR SINE MIR -6 256 148 1577 145 57 21 chr20 46040518 46040821 -20627184 - AluJb SINE Alu 0 313 1 322 333 59 26 chr20 46040821 46040873 -20627132 - MIR SINE MIR -114 148 99 285 271 65 61 chr20 46041309 46041523 -20626482 - L1ME4a LINE L1 -12 6109 5895 508 321 87 42 chr20 46041545 46041810 -20626195 - L1ME4a LINE L1 -10 6111 5835 2318 96 0 0 chr20 46041825 46042126 -20625879 + AluSq SINE Alu 1 301 -12 351 219 162 0 chr20 46042169 46042274 -20625731 - L1MC4a LINE L1 -1980 5828 5707 23 54 0 0 chr20 46042281 46042318 -20625687 + AT_rich Low_complexity Low_complexity 1 37 0 804 191 0 0 chr20 46042369 46042500 -20625505 - FLAM_C SINE Alu -2 131 1 322 292 66 7 chr20 46042504 46042641 -20625364 - L1ME4a LINE L1 -295 5826 5682 552 254 30 53 chr20 46043446 46043615 -20624390 + MER5B DNA MER1_type 1 165 -13 203 313 36 24 chr20 46043968 46044051 -20623954 - L2 LINE L2 -8 3305 3222 711 337 55 47 chr20 46044078 46044787 -20623218 - L2 LINE L2 -2 3270 2547 1237 164 33 5 chr20 46044787 46045000 -20623005 + MER20 DNA MER1_type 1 219 0 711 337 55 47 chr20 46045000 46045222 -20622783 - L2 LINE L2 -725 2547 2328 222 284 126 8 chr20 46045226 46045353 -20622652 + L2 LINE L2 3167 3308 -5 415 302 50 54 chr20 46045742 46045909 -20622096 - MIR3 SINE MIR -60 148 14 678 255 51 15 chr20 46049033 46049229 -20618776 + MIR SINE MIR 23 225 -37 441 238 34 35 chr20 46049259 46049438 -20618567 - MIR SINE MIR -63 145 16 273 286 16 44 chr20 46049904 46050086 -20617919 + (GGGTG)n Simple_repeat Simple_repeat 4 180 0 218 282 355 0 chr20 46050688 46050798 -20617207 - L2 LINE L2 -2 3270 3122 1961 132 14 0 chr20 46050923 46051211 -20616794 + AluSx SINE Alu 2 293 -19 247 300 64 55 chr20 46051406 46051516 -20616489 + L2 LINE L2 3146 3256 -16 308 345 8 0 chr20 46051565 46051687 -20616318 + (TGGA)n Simple_repeat Simple_repeat 1 123 0 212 256 0 12 chr20 46051743 46051825 -20616180 + (TGGG)n Simple_repeat Simple_repeat 2 82 0 276 285 37 0 chr20 46052334 46052434 -20615571 - MIR SINE MIR -63 145 37 334 262 52 114 chr20 46052463 46052673 -20615332 - MIR SINE MIR -46 216 20 448 261 43 7 chr20 46052988 46053126 -20614879 - L2 LINE L2 -5 3267 3125 326 322 7 59 chr20 46053231 46053383 -20614622 - MIR SINE MIR -89 173 30 * 583 256 70 40 chr20 46053382 46053581 -20614424 + MIR SINE MIR 12 216 -46 343 258 72 0 chr20 46054353 46054449 -20613556 - L2 LINE L2 -30 3242 3140 398 311 47 7 chr20 46054449 46054597 -20613408 + MIR SINE MIR 1 154 -108 408 221 148 13 chr20 46054600 46054749 -20613256 - MIR SINE MIR -1 261 93 646 172 123 0 chr20 46054750 46054872 -20613133 + FLAM_C SINE Alu 1 137 -6 296 357 19 7 chr20 46055016 46055168 -20612837 - MIR SINE MIR -65 143 27 183 266 0 0 chr20 46055465 46055529 -20612476 + (TG)n Simple_repeat Simple_repeat 1 64 0 881 231 78 12 chr20 46056207 46056354 -20611651 - MIR SINE MIR 0 262 91 1821 161 62 27 chr20 46056354 46056690 -20611315 - MER7A DNA MER2_type 0 346 1 881 231 78 12 chr20 46056690 46056784 -20611221 - MIR SINE MIR -171 91 5 307 339 0 8 chr20 46056794 46056921 -20611084 + (TCCA)n Simple_repeat Simple_repeat 3 128 0 * 451 270 19 6 chr20 46056843 46057002 -20611003 + (TTCA)n Simple_repeat Simple_repeat 4 164 0 30 69 0 0 chr20 46059954 46060012 -20607993 + GC_rich Low_complexity Low_complexity 1 58 0 21 0 0 0 chr20 46062457 46062478 -20605527 + AT_rich Low_complexity Low_complexity 1 21 0 205 195 0 0 chr20 46063980 46064021 -20603984 + A-rich Low_complexity Low_complexity 1 41 0 30 27 0 0 chr20 46068348 46068385 -20599620 + GC_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr20 46068397 46068420 -20599585 + GC_rich Low_complexity Low_complexity 1 23 0 233 243 35 125 chr20 46069007 46069151 -20598854 + MER5A DNA MER1_type 59 189 0 2260 83 0 43 chr20 46069428 46069753 -20598252 - AluY SINE Alu 0 311 1 688 155 121 0 chr20 46069757 46069873 -20598132 - FLAM_C SINE Alu -3 130 1 2016 146 0 3 chr20 46069873 46070211 -20597794 - AluSg SINE Alu 0 310 1 861 173 0 54 chr20 46070239 46070407 -20597598 - FRAM SINE Alu -17 159 1 2147 88 3 10 chr20 46070418 46070755 -20597250 - AluSp SINE Alu 0 313 1 1975 154 0 0 chr20 46070756 46071049 -20596956 - AluJb SINE Alu -19 293 1 2314 92 9 19 chr20 46073651 46073966 -20594039 + AluSx SINE Alu 1 312 0 246 296 121 15 chr20 46074151 46074283 -20593722 + MIR3 SINE MIR 45 190 -18 1292 136 18 50 chr20 46074290 46074511 -20593494 - AluSp SINE Alu -13 300 87 1573 155 112 3 chr20 46074608 46074911 -20593094 + MER89 LTR ERV1 2 337 -222 733 115 0 0 chr20 46074914 46075018 -20592987 - AluSp/q SINE Alu -22 291 188 1015 128 0 7 chr20 46075018 46075159 -20592846 - AluSp SINE Alu -88 225 86 25 0 0 0 chr20 46075425 46075450 -20592555 + GC_rich Low_complexity Low_complexity 1 25 0 2021 143 3 3 chr20 46076528 46076829 -20591176 + AluSx SINE Alu 1 301 -11 1012 186 0 6 chr20 46076829 46077001 -20591004 + AluSg/x SINE Alu 132 302 -8 235 65 0 0 chr20 46077001 46077032 -20590973 + MER89 LTR ERV1 502 532 -27 2516 70 3 6 chr20 46077252 46077564 -20590441 - AluY SINE Alu 0 311 1 2362 103 3 3 chr20 46077997 46078309 -20589696 + AluSp SINE Alu 1 312 -1 313 240 184 8 chr20 46078501 46078626 -20589379 - MIR SINE MIR -112 150 4 409 115 0 0 chr20 46079134 46079195 -20588810 + Alu SINE Alu 238 298 -14 2592 67 0 0 chr20 46079199 46079496 -20588509 + AluY SINE Alu 1 297 -14 1890 119 0 0 chr20 46080460 46080711 -20587294 + AluSx SINE Alu 44 294 -18 206 295 26 26 chr20 46081130 46081208 -20586797 + MIR SINE MIR 100 177 -85 336 137 192 0 chr20 46082050 46082123 -20585882 + MER5A DNA MER1_type 6 92 -97 1137 195 43 80 chr20 46082235 46082537 -20585468 + AluJo SINE Alu 1 291 -11 525 251 157 80 chr20 46082585 46082948 -20585057 + MLT1K LTR MaLR 189 579 -9 190 306 71 0 chr20 46082988 46083073 -20584932 - L2 LINE L2 -20 3293 3203 2426 95 3 3 chr20 46083158 46083464 -20584541 + AluSq SINE Alu 3 308 -5 381 152 303 0 chr20 46083547 46083646 -20584359 + MIR SINE MIR 127 255 -7 2173 130 0 3 chr20 46083803 46084102 -20583903 + AluSq SINE Alu 1 298 -15 649 192 11 8 chr20 46084168 46084345 -20583660 + AluJo SINE Alu 83 301 -11 19101 38 3 0 chr20 46134395 46137508 -20530497 + L1PA4 LINE L1 3041 6152 -3 6196 31 4 0 chr20 46137617 46138359 -20529646 + L1PA4 LINE L1 5408 6152 -3 180 0 0 0 chr20 46138391 46138411 -20529594 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 6390 25 0 0 chr20 46138468 46139216 -20528789 + L1PA3 LINE L1 5408 6155 0 21 36 0 0 chr20 46140134 46140162 -20527843 + AT_rich Low_complexity Low_complexity 1 28 0 2204 101 0 7 chr20 46140493 46140789 -20527216 + AluSg SINE Alu 1 294 -16 672 318 113 18 chr20 46140989 46141369 -20526636 - L2 LINE L2 -5 3308 2893 23 0 0 0 chr20 46141495 46141518 -20526487 + AT_rich Low_complexity Low_complexity 1 23 0 346 370 67 0 chr20 46142400 46142535 -20525470 - L2 LINE L2 -2 3270 3127 222 37 0 0 chr20 46146970 46146997 -20521008 + (CA)n Simple_repeat Simple_repeat 2 28 0 315 290 105 40 chr20 46149248 46149448 -20518557 + MIR SINE MIR 40 252 -10 929 304 45 65 chr20 46149464 46150041 -20517964 + L2 LINE L2 2648 3221 -92 22 56 0 0 chr20 46150070 46150106 -20517899 + AT_rich Low_complexity Low_complexity 1 36 0 23 68 0 0 chr20 46150144 46150188 -20517817 + AT_rich Low_complexity Low_complexity 1 44 0 2287 33 0 0 chr20 46150243 46150538 -20517467 + L1PA4 LINE L1 5870 6164 0 2619 233 117 15 chr20 46150546 46151774 -20516231 + L1MB7 LINE L1 1532 2889 -3493 267 167 0 0 chr20 46151774 46151816 -20516189 - Tigger7 DNA MER2_type -297 42 1 * 423 167 90 0 chr20 46151816 46151885 -20516120 + MLT2B1 LTR ERVL 354 429 -91 3303 199 23 41 chr20 46151895 46152684 -20515321 + L1MB7 LINE L1 5646 6420 0 27 0 0 0 chr20 46153046 46153073 -20514932 + AT_rich Low_complexity Low_complexity 1 27 0 1620 167 4 11 chr20 46153096 46153359 -20514646 - AluJo SINE Alu -35 277 17 618 310 57 81 chr20 46153386 46153844 -20514161 - LTR67 LTR ERVL -106 451 5 2063 81 4 7 chr20 46155213 46155486 -20512519 - AluY SINE Alu -1 310 39 21 36 0 0 chr20 46155875 46155903 -20512102 + AT_rich Low_complexity Low_complexity 1 28 0 2105 118 20 0 chr20 46157298 46157603 -20510402 + AluSp SINE Alu 3 313 0 366 23 0 0 chr20 46157605 46157648 -20510357 + (GGAA)n Simple_repeat Simple_repeat 3 45 0 1393 28 17 0 chr20 46157648 46157825 -20510180 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 403 329 63 25 chr20 46163194 46163352 -20504653 - MIR SINE MIR -87 175 12 2294 94 7 3 chr20 46163531 46163840 -20504165 - AluY SINE Alu -1 310 1 22 0 0 0 chr20 46164133 46164155 -20503850 + AT_rich Low_complexity Low_complexity 1 22 0 228 327 125 10 chr20 46164402 46164506 -20503499 - L2 LINE L2 -220 3052 2937 21 0 0 0 chr20 46164869 46164890 -20503115 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr20 46165788 46165813 -20502192 + AT_rich Low_complexity Low_complexity 1 25 0 566 350 89 28 chr20 46165813 46166207 -20501798 - L2 LINE L2 -19 3294 2877 1033 252 175 11 chr20 46166518 46166959 -20501046 + L2 LINE L2 1859 2371 -943 1060 275 132 28 chr20 46166962 46167431 -20500574 + LTR53 LTR ERVL 2 519 0 521 383 139 15 chr20 46167431 46168260 -20499745 + L2 LINE L2 2372 3313 0 5810 192 16 14 chr20 46169152 46170368 -20497637 - L1P LINE L1 -2792 3354 2137 943 255 160 5 chr20 46170699 46171068 -20496937 - L1ME LINE L1 -359 5811 5386 2393 265 76 24 chr20 46171175 46172389 -20495616 - L1ME LINE L1 -747 5399 4146 350 202 0 43 chr20 46172430 46172524 -20495481 - L1MA8 LINE L1 -10 6281 6192 4750 206 27 3 chr20 46172539 46174292 -20493713 - L1MA9 LINE L1 -232 6080 4295 2673 179 41 16 chr20 46174286 46174899 -20493106 + L1MA9 LINE L1 3652 4279 -1867 * 928 211 11 0 chr20 46174951 46175126 -20492879 + Tigger2 DNA MER2_type 2541 2717 -1 2494 109 58 21 chr20 46175783 46176215 -20491790 + LTR7 LTR ERV1 1 448 -2 19637 91 18 7 chr20 46176217 46179180 -20488825 + HERVH LTR ERV1 1 2995 -4718 863 133 7 0 chr20 46179159 46179309 -20488696 + HERVH LTR ERV1 3140 3290 -4423 * 3077 113 10 0 chr20 46179308 46179795 -20488210 + HERVH LTR ERV1 3500 3991 -3722 * 3982 150 8 1 chr20 46179794 46180459 -20487546 + HERVH LTR ERV1 4481 5149 -2564 1331 120 18 5 chr20 46180460 46180677 -20487328 + HERVH LTR ERV1 5600 5819 -1894 2345 85 48 13 chr20 46180677 46181054 -20486951 + HERVH LTR ERV1 7324 7713 0 2402 120 58 21 chr20 46181054 46181486 -20486519 + LTR7 LTR ERV1 1 448 -2 1307 203 136 0 chr20 46181744 46182060 -20485945 - MER47A DNA MER2_type 0 366 8 772 149 43 0 chr20 46182066 46182227 -20485778 - L1MA8 LINE L1 -28 6263 6096 254 367 0 9 chr20 46182532 46182641 -20485364 + MIR SINE MIR 100 207 -55 21 36 0 0 chr20 46182924 46182952 -20485053 + AT_rich Low_complexity Low_complexity 1 28 0 2192 133 0 16 chr20 46183080 46183396 -20484609 - AluSx SINE Alu -1 311 1 21 0 0 0 chr20 46183405 46183426 -20484579 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr20 46183710 46183735 -20484270 + AT_rich Low_complexity Low_complexity 1 25 0 260 283 10 50 chr20 46184118 46184217 -20483788 + MLT1H LTR MaLR 61 155 -394 289 218 218 26 chr20 46184384 46184540 -20483465 + MLT1H LTR MaLR 320 505 -44 1366 150 0 9 chr20 46184737 46184964 -20483041 + MER4E LTR ERV1 555 779 0 21 36 0 0 chr20 46186068 46186096 -20481909 + AT_rich Low_complexity Low_complexity 1 28 0 1872 173 21 0 chr20 46186570 46186906 -20481099 - MER2 DNA MER2_type 0 344 2 1470 221 157 50 chr20 46187027 46187670 -20480335 + MER50 LTR ERV1 1 712 -22 309 316 10 0 chr20 46187695 46187793 -20480212 - MIR SINE MIR -7 255 157 618 192 0 0 chr20 46187794 46187898 -20480107 + LTR18A LTR ERVL 1 104 -253 3647 152 23 0 chr20 46187902 46188506 -20479499 + HERVL18 LTR ERVL 5430 6047 0 1245 221 149 37 chr20 46188507 46188729 -20479276 + LTR18A LTR ERVL 1 271 -86 2575 55 3 0 chr20 46188729 46189039 -20478966 - AluY SINE Alu 0 311 1 1245 221 149 37 chr20 46189039 46189137 -20478868 + LTR18A LTR ERVL 271 357 0 212 250 23 0 chr20 46189144 46189188 -20478817 - MIR SINE MIR -203 59 15 354 172 35 0 chr20 46189592 46189679 -20478326 - L1PA13 LINE L1 -3 6160 6071 23 0 0 0 chr20 46190950 46190973 -20477032 + AT_rich Low_complexity Low_complexity 1 23 0 1543 212 60 26 chr20 46191215 46191711 -20476294 + Charlie1 DNA MER1_type 33 545 -2216 4795 106 0 0 chr20 46191721 46192763 -20475242 - L1PA8A LINE L1 0 6131 5188 7862 152 16 6 chr20 46192766 46194219 -20473786 + L1P LINE L1 3679 5147 -999 710 169 46 82 chr20 46194254 46194473 -20473532 + Charlie1 DNA MER1_type 703 913 -1848 2502 242 23 36 chr20 46194494 46195341 -20472664 + L1MC3 LINE L1 5489 6341 -1467 10895 33 3 0 chr20 46195356 46197436 -20470569 + L1PA4 LINE L1 4068 6154 -1 180 0 0 0 chr20 46197525 46197545 -20470460 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 3013 194 147 128 chr20 46197548 46198477 -20469528 + L1MD3 LINE L1 6365 7460 -535 377 280 8 32 chr20 46198477 46198602 -20469403 + MLT1F1 LTR MaLR 4 125 -442 3013 194 147 128 chr20 46198602 46199141 -20468864 + L1MD3 LINE L1 7460 7987 -8 479 365 41 16 chr20 46199796 46200040 -20467965 - MIR SINE MIR -5 257 8 2476 72 0 3 chr20 46200093 46200399 -20467606 - AluY SINE Alu -6 305 1 298 289 6 90 chr20 46201026 46201182 -20466823 - MIR SINE MIR -50 212 70 23 33 0 0 chr20 46201971 46202001 -20466004 + AT_rich Low_complexity Low_complexity 1 30 0 15318 40 5 1 chr20 46203934 46206581 -20461424 - L1PA4 LINE L1 -1 6154 3499 7543 38 0 3 chr20 46206581 46207575 -20460430 + L1PA4 LINE L1 2522 3512 -2634 219 157 0 59 chr20 46207954 46208005 -20460000 + (TATATG)n Simple_repeat Simple_repeat 1 48 0 1949 211 49 5 chr20 46208855 46209263 -20458742 + MSTB LTR MaLR 1 426 0 227 267 63 5 chr20 46210412 46210618 -20457387 + L1M4 LINE L1 3137 3354 -2792 2119 202 49 34 chr20 46210676 46211390 -20456615 + L1MB3 LINE L1 4767 5489 -694 743 151 32 9 chr20 46211426 46211650 -20456355 + GA-rich Low_complexity Low_complexity 1 229 0 3059 182 18 24 chr20 46211652 46212322 -20455683 + L1MB3 LINE L1 5478 6143 -40 2234 51 0 7 chr20 46212382 46212688 -20455317 - AluY SINE Alu 0 313 10 748 293 62 30 chr20 46212723 46213321 -20454684 + L1M4 LINE L1 3511 4127 -2019 27 62 0 0 chr20 46213435 46213483 -20454522 + AT_rich Low_complexity Low_complexity 1 48 0 365 227 41 0 chr20 46213516 46213688 -20454317 + (TA)n Simple_repeat Simple_repeat 1 179 0 2196 78 26 36 chr20 46213964 46214273 -20453732 - AluSx SINE Alu -6 306 1 1744 170 0 48 chr20 46214277 46214588 -20453417 - AluJb SINE Alu -16 296 1 625 187 115 0 chr20 46214598 46214756 -20453249 - MER5A DNA MER1_type -7 182 4 2423 129 13 8 chr20 46214994 46215380 -20452625 + MLT1B LTR MaLR 1 388 -2 286 313 15 8 chr20 46215686 46215817 -20452188 - LTR67 LTR ERVL 0 557 426 573 245 144 56 chr20 46216055 46216361 -20451644 + MLT1H1 LTR MaLR 3 335 -220 932 98 8 8 chr20 46216377 46216509 -20451496 - FLAM_C SINE Alu 0 133 2 2535 185 21 37 chr20 46216518 46217092 -20450913 - MER74B LTR ERVL 0 622 58 1884 158 0 10 chr20 46217092 46217396 -20450609 + AluJo SINE Alu 1 301 -11 558 254 45 32 chr20 46217410 46217630 -20450375 + MLT1H1 LTR MaLR 332 554 -1 410 229 77 16 chr20 46217731 46217884 -20450121 - MIR SINE MIR -35 173 1 714 237 23 45 chr20 46218815 46218992 -20449013 + MER5B DNA MER1_type 6 178 0 1857 134 54 0 chr20 46219174 46219451 -20448554 + AluJb SINE Alu 1 292 -20 355 295 43 29 chr20 46219612 46219751 -20448254 + MIR SINE MIR 5 145 -117 754 166 50 61 chr20 46219804 46219836 -20448169 - MER5A DNA MER1_type -10 179 148 2154 148 0 0 chr20 46219836 46220140 -20447865 + AluSx SINE Alu 1 304 -8 2271 78 0 3 chr20 46220141 46220447 -20447558 + AluSg SINE Alu 1 305 0 754 166 50 61 chr20 46220447 46220592 -20447413 - MER5A DNA MER1_type -40 149 1 2193 109 0 29 chr20 46221009 46221322 -20446683 - AluSx SINE Alu -8 304 1 1913 146 7 13 chr20 46221529 46221837 -20446168 + AluJb SINE Alu 1 306 -6 344 207 115 11 chr20 46222063 46222150 -20445855 + MIR SINE MIR 25 120 -88 189 0 0 0 chr20 46222219 46222240 -20445765 + (TG)n Simple_repeat Simple_repeat 2 22 0 833 243 28 32 chr20 46222241 46222459 -20445546 - MIR SINE MIR -25 237 21 1011 194 62 15 chr20 46223298 46223528 -20444477 - MIR SINE MIR -19 243 5 263 182 18 18 chr20 46223519 46223574 -20444431 + MIR3 SINE MIR 108 162 -46 * 331 289 39 31 chr20 46223629 46223757 -20444248 + L2 LINE L2 3141 3269 -3 880 114 0 63 chr20 46223850 46224008 -20443997 + MER20 DNA MER1_type 14 161 -58 681 281 45 20 chr20 46224396 46224642 -20443363 + MIR SINE MIR 11 262 0 408 228 0 11 chr20 46224649 46224741 -20443264 - MIR SINE MIR -150 112 22 199 97 65 0 chr20 46224831 46224862 -20443143 + L2 LINE L2 3263 3295 -18 2135 114 7 7 chr20 46224872 46225179 -20442826 + AluSx SINE Alu 1 307 -5 301 326 75 27 chr20 46225371 46225518 -20442487 - MIR3 SINE MIR -23 185 32 838 216 12 35 chr20 46225529 46225700 -20442305 - AluJb SINE Alu -24 288 122 363 325 53 30 chr20 46225719 46225888 -20442117 - MIR SINE MIR -3 259 87 423 0 0 0 chr20 46226462 46226509 -20441496 + (CA)n Simple_repeat Simple_repeat 1 47 0 1363 182 4 9 chr20 46227195 46227426 -20440579 + AluJo SINE Alu 2 231 -81 210 335 115 31 chr20 46227864 46228055 -20439950 + MIR SINE MIR 44 250 -12 350 301 22 7 chr20 46228451 46228587 -20439418 - MER91A DNA MER1_type -57 139 2 450 162 90 27 chr20 46229057 46229168 -20438837 + MIR3 SINE MIR 48 165 -43 1725 141 34 13 chr20 46230503 46230801 -20437204 + AluJo SINE Alu 3 306 -6 232 298 240 0 chr20 46231548 46231669 -20436336 - MER91A DNA MER1_type -3 193 44 25 51 0 0 chr20 46231969 46232008 -20435997 + GC_rich Low_complexity Low_complexity 1 39 0 279 308 19 29 chr20 46232290 46232394 -20435611 - MIR SINE MIR -90 118 16 232 259 19 0 chr20 46232428 46232482 -20435523 - L2 LINE L2 -2 3311 3257 346 179 12 60 chr20 46232499 46232583 -20435422 + MIR SINE MIR 72 151 -111 993 326 94 13 chr20 46232840 46233129 -20434876 + L2 LINE L2 2810 3153 -160 2490 61 0 6 chr20 46233129 46233441 -20434564 - AluSg SINE Alu 0 310 1 993 326 94 13 chr20 46233441 46233617 -20434388 + L2 LINE L2 3153 3313 0 237 258 0 15 chr20 46233681 46233747 -20434258 - L2 LINE L2 -1 3312 3248 234 128 0 0 chr20 46234263 46234302 -20433703 + (TATG)n Simple_repeat Simple_repeat 2 40 0 1960 68 30 19 chr20 46234386 46234651 -20433354 + AluY SINE Alu 1 268 -43 638 52 0 0 chr20 46234651 46234728 -20433277 + AluY SINE Alu 219 295 -16 227 281 90 22 chr20 46234731 46234820 -20433185 - MIR SINE MIR -44 218 124 388 235 0 0 chr20 46234831 46234916 -20433089 - L2 LINE L2 -1 3312 3228 256 269 39 13 chr20 46234910 46234988 -20433017 - MER5A DNA MER1_type -9 180 101 * 189 147 0 0 chr20 46235076 46235110 -20432895 + (TG)n Simple_repeat Simple_repeat 2 35 0 339 263 35 2 chr20 46235271 46235393 -20432612 + L1MC/D LINE L1 5665 5786 -392 543 244 6 85 chr20 46235424 46235635 -20432370 - MIR SINE MIR -28 234 41 1532 295 110 31 chr20 46235926 46236732 -20431273 + L2 LINE L2 1598 2467 -847 382 125 69 0 chr20 46236771 46236843 -20431162 - MER20 DNA MER1_type -2 217 141 580 219 8 0 chr20 46237039 46237158 -20430847 - MER20 DNA MER1_type -99 120 1 1983 189 67 73 chr20 46237162 46237264 -20430741 - L1ME3A LINE L1 -18 6152 6051 2021 138 10 10 chr20 46237264 46237576 -20430429 + AluSx SINE Alu 1 312 0 1983 189 67 73 chr20 46237576 46237668 -20430337 - L1ME3A LINE L1 -119 6051 5960 1934 111 0 0 chr20 46237668 46237930 -20430075 - AluSg1 SINE Alu -45 264 3 1983 189 67 73 chr20 46237930 46238363 -20429642 - L1ME3A LINE L1 -210 5960 5528 1331 285 122 6 chr20 46238370 46239128 -20428877 + L2 LINE L2 2454 3299 -14 234 0 0 0 chr20 46239130 46239156 -20428849 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 22 56 0 0 chr20 46239320 46239356 -20428649 + GC_rich Low_complexity Low_complexity 1 36 0 219 247 10 41 chr20 46239590 46239687 -20428318 + (CGGGG)n Simple_repeat Simple_repeat 1 94 0 714 55 0 0 chr20 46240634 46240725 -20427280 + (GGA)n Simple_repeat Simple_repeat 1 91 0 257 275 14 14 chr20 46240800 46240869 -20427136 - MIR3 SINE MIR -27 181 113 385 363 100 25 chr20 46240954 46241591 -20426414 + L2 LINE L2 2387 3266 -6 261 0 0 0 chr20 46241832 46241861 -20426144 + (TG)n Simple_repeat Simple_repeat 2 30 0 540 315 65 5 chr20 46242690 46242874 -20425131 + MIR3 SINE MIR 12 206 -2 211 200 67 0 chr20 46242913 46242958 -20425047 + MIR SINE MIR 106 153 -109 207 245 0 20 chr20 46243142 46243191 -20424814 + C-rich Low_complexity Low_complexity 4 51 0 300 368 75 17 chr20 46243704 46243878 -20424127 + MIR3 SINE MIR 10 193 -15 369 288 34 40 chr20 46244316 46244493 -20423512 - MIR3 SINE MIR 0 208 33 261 0 0 0 chr20 46245319 46245348 -20422657 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 444 286 16 8 chr20 46245448 46245574 -20422431 + MIR SINE MIR 21 147 -61 600 84 0 0 chr20 46247549 46247632 -20420373 + (TG)n Simple_repeat Simple_repeat 2 84 0 529 261 90 37 chr20 46250235 46250423 -20417582 - MIR SINE MIR -53 209 12 868 319 91 48 chr20 46251152 46252202 -20415803 + L2 LINE L2 2167 3272 0 255 362 126 0 chr20 46252428 46252555 -20415450 - MIR SINE MIR -11 251 109 202 338 7 32 chr20 46253239 46253393 -20414612 + GA-rich Low_complexity Low_complexity 1 150 0 421 311 24 55 chr20 46254010 46254241 -20413764 - MIR SINE MIR -30 232 15 267 363 15 37 chr20 46255115 46255250 -20412755 - L2 LINE L2 -2 3270 3139 471 260 133 33 chr20 46255274 46255455 -20412550 - MIR SINE MIR -4 258 60 322 333 59 26 chr20 46255777 46255876 -20412129 - MIR SINE MIR -6 256 148 1577 145 57 21 chr20 46255876 46256179 -20411826 - AluJb SINE Alu 0 313 1 322 333 59 26 chr20 46256179 46256231 -20411774 - MIR SINE MIR -114 148 99 285 271 65 61 chr20 46256667 46256881 -20411124 - L1ME4a LINE L1 -12 6109 5895 508 321 87 42 chr20 46256903 46257168 -20410837 - L1ME4a LINE L1 -10 6111 5835 2318 96 0 0 chr20 46257183 46257484 -20410521 + AluSq SINE Alu 1 301 -12 351 219 162 0 chr20 46257527 46257632 -20410373 - L1MC4a LINE L1 -1980 5828 5707 23 54 0 0 chr20 46257639 46257676 -20410329 + AT_rich Low_complexity Low_complexity 1 37 0 804 191 0 0 chr20 46257727 46257858 -20410147 - FLAM_C SINE Alu -2 131 1 322 292 66 7 chr20 46257862 46257999 -20410006 - L1ME4a LINE L1 -295 5826 5682 552 254 30 53 chr20 46258804 46258973 -20409032 + MER5B DNA MER1_type 1 165 -13 203 313 36 24 chr20 46259326 46259409 -20408596 - L2 LINE L2 -8 3305 3222 711 337 55 47 chr20 46259436 46260145 -20407860 - L2 LINE L2 -2 3270 2547 1237 164 33 5 chr20 46260145 46260358 -20407647 + MER20 DNA MER1_type 1 219 0 711 337 55 47 chr20 46260358 46260580 -20407425 - L2 LINE L2 -725 2547 2328 222 284 126 8 chr20 46260584 46260711 -20407294 + L2 LINE L2 3167 3308 -5 415 302 50 54 chr20 46261100 46261267 -20406738 - MIR3 SINE MIR -60 148 14 678 255 51 15 chr20 46264391 46264587 -20403418 + MIR SINE MIR 23 225 -37 441 238 34 35 chr20 46264617 46264796 -20403209 - MIR SINE MIR -63 145 16 273 286 16 44 chr20 46265262 46265444 -20402561 + (GGGTG)n Simple_repeat Simple_repeat 4 180 0 218 282 355 0 chr20 46266046 46266156 -20401849 - L2 LINE L2 -2 3270 3122 1961 132 14 0 chr20 46266281 46266569 -20401436 + AluSx SINE Alu 2 293 -19 247 300 64 55 chr20 46266764 46266874 -20401131 + L2 LINE L2 3146 3256 -16 308 345 8 0 chr20 46266923 46267045 -20400960 + (TGGA)n Simple_repeat Simple_repeat 1 123 0 212 256 0 12 chr20 46267101 46267183 -20400822 + (TGGG)n Simple_repeat Simple_repeat 2 82 0 276 285 37 0 chr20 46267692 46267792 -20400213 - MIR SINE MIR -63 145 37 334 262 52 114 chr20 46267821 46268031 -20399974 - MIR SINE MIR -46 216 20 448 261 43 7 chr20 46268346 46268484 -20399521 - L2 LINE L2 -5 3267 3125 326 322 7 59 chr20 46268589 46268741 -20399264 - MIR SINE MIR -89 173 30 * 583 256 70 40 chr20 46268740 46268939 -20399066 + MIR SINE MIR 12 216 -46 343 258 72 0 chr20 46269711 46269807 -20398198 - L2 LINE L2 -30 3242 3140 398 311 47 7 chr20 46269807 46269955 -20398050 + MIR SINE MIR 1 154 -108 408 221 148 13 chr20 46269958 46270107 -20397898 - MIR SINE MIR -1 261 93 646 172 123 0 chr20 46270108 46270230 -20397775 + FLAM_C SINE Alu 1 137 -6 296 357 19 7 chr20 46270374 46270526 -20397479 - MIR SINE MIR -65 143 27 183 266 0 0 chr20 46270823 46270887 -20397118 + (TG)n Simple_repeat Simple_repeat 1 64 0 881 231 78 12 chr20 46271565 46271712 -20396293 - MIR SINE MIR 0 262 91 1821 161 62 27 chr20 46271712 46272048 -20395957 - MER7A DNA MER2_type 0 346 1 881 231 78 12 chr20 46272048 46272142 -20395863 - MIR SINE MIR -171 91 5 307 339 0 8 chr20 46272152 46272279 -20395726 + (TCCA)n Simple_repeat Simple_repeat 3 128 0 * 451 270 19 6 chr20 46272201 46272360 -20395645 + (TTCA)n Simple_repeat Simple_repeat 4 164 0 30 69 0 0 chr20 46275312 46275370 -20392635 + GC_rich Low_complexity Low_complexity 1 58 0 329 272 0 19 chr20 46276076 46276179 -20391826 + MIR SINE MIR 29 129 -133 2178 75 10 7 chr20 46280517 46280811 -20387194 - AluSp SINE Alu -18 295 1 1765 188 36 12 chr20 46281063 46281392 -20386613 - MER1B DNA MER1_type 0 337 1 208 282 40 117 chr20 46281473 46281721 -20386284 + L2 LINE L2 3044 3272 0 379 246 98 33 chr20 46282947 46283069 -20384936 + MIR SINE MIR 18 147 -61 813 233 47 0 chr20 46283784 46283977 -20384028 + MER20 DNA MER1_type 18 219 0 426 340 141 38 chr20 46284161 46284390 -20383615 + L1ME4a LINE L1 5174 5378 -743 1839 117 62 0 chr20 46284390 46284663 -20383342 - AluJb SINE Alu -7 305 16 426 340 141 38 chr20 46284663 46284688 -20383317 + L1ME4a LINE L1 5378 5399 -722 2184 86 13 16 chr20 46284688 46284992 -20383013 + AluY SINE Alu 1 303 -8 426 340 141 38 chr20 46284992 46285156 -20382849 + L1ME4a LINE L1 5399 5545 -576 2051 131 0 3 chr20 46285156 46285453 -20382552 + AluSx SINE Alu 1 296 -16 426 340 141 38 chr20 46285453 46285839 -20382166 + L1ME4a LINE L1 5545 6080 -41 2271 91 10 0 chr20 46285839 46286147 -20381858 - AluSp SINE Alu -2 311 1 426 340 141 38 chr20 46286147 46286191 -20381814 + L1ME4a LINE L1 6080 6118 -3 323 280 83 32 chr20 46286338 46286556 -20381449 + L1M4 LINE L1 4939 5167 -979 250 283 50 20 chr20 46287064 46287163 -20380842 + L2 LINE L2 3132 3233 -39 496 333 9 40 chr20 46287599 46287670 -20380335 - MIR SINE MIR -27 235 163 1953 135 14 0 chr20 46287670 46287966 -20380039 - AluSx SINE Alu -12 300 1 496 333 9 40 chr20 46287966 46288122 -20379883 - MIR SINE MIR -99 163 15 1064 261 77 70 chr20 46288167 46288649 -20379356 + MLT1J LTR MaLR 2 486 -25 284 348 96 0 chr20 46289526 46289661 -20378344 - MIR SINE MIR -68 194 47 1280 152 4 59 chr20 46290771 46291008 -20376997 + AluJb SINE Alu 57 280 -32 24 32 0 0 chr20 46291107 46291138 -20376867 + AT_rich Low_complexity Low_complexity 1 31 0 211 293 0 71 chr20 46292269 46292368 -20375637 + MIR SINE MIR 117 208 -54 387 220 48 143 chr20 46292369 46292421 -20375584 - MER91B DNA MER1_type 0 190 135 2299 103 3 0 chr20 46292421 46292732 -20375273 - AluSp SINE Alu -1 312 1 387 220 48 143 chr20 46292732 46292888 -20375117 - MER91B DNA MER1_type -55 135 2 383 331 0 8 chr20 46293836 46293969 -20374036 + MIR SINE MIR 16 147 -61 455 191 61 76 chr20 46294209 46294340 -20373665 + L1ME3A LINE L1 6035 6163 -7 1898 120 33 0 chr20 46294373 46294689 -20373316 + AluSq SINE Alu 1 325 0 280 281 122 55 chr20 46294737 46294901 -20373104 - MIR SINE MIR -73 189 15 399 267 29 0 chr20 46295602 46295707 -20372298 - MER91B DNA MER1_type -5 185 78 556 202 40 0 chr20 46295721 46295845 -20372160 + MER33 DNA MER1_type 1 129 -195 1012 84 8 0 chr20 46295865 46295996 -20372009 - AluY SINE Alu -179 132 1 704 188 0 0 chr20 46296045 46296157 -20371848 + AluJo SINE Alu 2 113 -199 2291 99 0 6 chr20 46296157 46296470 -20371535 - AluSx SINE Alu 0 312 2 1320 142 75 0 chr20 46296471 46296683 -20371322 - AluJb SINE Alu 0 312 85 883 214 6 0 chr20 46296683 46296856 -20371149 + AluJo SINE Alu 104 277 -35 245 212 15 45 chr20 46296896 46296962 -20371043 - MER91B DNA MER1_type -126 64 1 813 180 5 2 chr20 46298416 46298634 -20369371 + AluJo SINE Alu 14 269 -43 722 267 50 5 chr20 46298634 46298855 -20369150 + MIR SINE MIR 32 262 0 390 258 150 18 chr20 46298852 46299019 -20368986 - MIR SINE MIR -13 249 61 * 670 297 52 44 chr20 46299572 46299925 -20368080 + L2 LINE L2 2920 3271 -1 973 216 20 20 chr20 46300005 46300209 -20367796 - MIR SINE MIR 0 262 59 953 98 8 8 chr20 46300377 46300510 -20367495 - FLAM_C SINE Alu 0 133 1 375 323 32 0 chr20 46300597 46300721 -20367284 + MIR SINE MIR 111 238 -24 226 271 17 0 chr20 46302325 46302384 -20365621 - MIR SINE MIR -64 144 85 1874 138 0 30 chr20 46302498 46302803 -20365202 + AluJb SINE Alu 1 296 -16 2022 103 7 7 chr20 46303062 46303362 -20364643 + AluSp SINE Alu 1 300 -13 1780 111 80 3 chr20 46303399 46303688 -20364317 + AluSq SINE Alu 3 313 0 552 174 0 20 chr20 46304109 46304207 -20363798 + FRAM SINE Alu 69 164 -12 364 172 0 0 chr20 46304509 46304573 -20363432 - FLAM SINE Alu -7 126 63 34 0 0 0 chr20 46305117 46305151 -20362854 + AT_rich Low_complexity Low_complexity 1 34 0 1733 139 15 11 chr20 46305151 46305417 -20362588 - AluSx SINE Alu -45 267 1 358 250 24 25 chr20 46305920 46306071 -20361934 - MIR SINE MIR -65 143 19 1888 116 46 16 chr20 46306071 46306374 -20361631 + AluSx SINE Alu 1 312 0 672 246 73 42 chr20 46306387 46306578 -20361427 - MIR SINE MIR -26 236 40 2156 95 3 7 chr20 46306581 46306875 -20361130 + AluSp SINE Alu 1 293 -20 301 288 79 75 chr20 46308982 46309260 -20358745 - L1MCa LINE L1 -4981 1445 1167 24 32 0 0 chr20 46309494 46309525 -20358480 + AT_rich Low_complexity Low_complexity 1 31 0 182 300 0 20 chr20 46309527 46309577 -20358428 - MIR SINE MIR -208 54 6 427 231 0 60 chr20 46309644 46309761 -20358244 - MIR SINE MIR -58 150 41 2308 71 0 7 chr20 46309797 46310094 -20357911 - AluSg SINE Alu -15 295 1 1128 192 0 14 chr20 46310103 46310352 -20357653 - AluJb SINE Alu 0 330 85 1286 139 9 19 chr20 46310411 46310627 -20357378 - AluJb SINE Alu -14 298 85 1973 112 31 0 chr20 46310627 46310914 -20357091 - AluSx SINE Alu -16 296 1 414 237 56 22 chr20 46310937 46311093 -20356912 - MIR SINE MIR -63 145 20 2218 113 3 0 chr20 46311414 46311725 -20356280 + AluSx SINE Alu 1 312 0 236 266 32 43 chr20 46311872 46311966 -20356039 + L2 LINE L2 3220 3312 -1 196 171 0 0 chr20 46311974 46312009 -20355996 - MIR SINE MIR -61 147 113 1613 155 10 41 chr20 46312076 46312367 -20355638 + AluJo SINE Alu 1 282 -30 1486 216 52 65 chr20 46312402 46312879 -20355126 - LTR33A LTR ERVL -49 474 4 209 253 108 36 chr20 46313002 46313085 -20354920 + L2 LINE L2 3019 3107 -165 206 133 0 0 chr20 46313286 46313316 -20354689 + MIR SINE MIR 117 146 -116 398 262 257 15 chr20 46313342 46313548 -20354457 + MIR SINE MIR 7 262 0 297 139 0 0 chr20 46313613 46313680 -20354325 - AluSp/q SINE Alu 0 307 241 826 149 29 69 chr20 46313680 46313855 -20354150 - AluJo SINE Alu -144 168 1 358 253 0 0 chr20 46313856 46313939 -20354066 + L2 LINE L2 3176 3258 -14 1300 205 17 37 chr20 46313942 46314100 -20353905 - AluJb SINE Alu -21 291 140 2720 16 0 0 chr20 46314100 46314409 -20353596 - AluY SINE Alu -2 309 1 1300 205 17 37 chr20 46314409 46314547 -20353458 - AluJb SINE Alu -172 140 1 570 287 97 9 chr20 46314823 46315039 -20352966 - MIR SINE MIR -8 254 20 1268 154 221 32 chr20 46315044 46315297 -20352708 - AluSx SINE Alu -1 301 1 205 269 0 0 chr20 46315335 46315387 -20352618 + GA-rich Low_complexity Low_complexity 5 56 0 373 313 95 20 chr20 46315623 46315909 -20352096 + MIR SINE MIR 35 245 -17 334 273 35 146 chr20 46315893 46315971 -20352034 + MIR SINE MIR 12 97 -165 * 1064 84 22 17 chr20 46315971 46316150 -20351855 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1802 137 0 35 chr20 46316153 46316468 -20351537 - AluSx SINE Alu -7 305 2 334 273 35 146 chr20 46316468 46316645 -20351360 + MIR SINE MIR 99 242 -20 615 302 42 5 chr20 46316672 46316884 -20351121 - MIR SINE MIR -2 260 41 1450 127 88 46 chr20 46317343 46317626 -20350379 + AluJo SINE Alu 1 295 -17 767 87 0 10 chr20 46317649 46317752 -20350253 + AluSq/x SINE Alu 2 103 -209 1943 143 0 3 chr20 46317782 46318082 -20349923 - AluSx SINE Alu -13 299 1 284 248 32 10 chr20 46318089 46318205 -20349800 - L1MB5 LINE L1 -76 6108 5986 1917 152 0 13 chr20 46318211 46318527 -20349478 - AluSx SINE Alu 0 312 1 1164 113 0 6 chr20 46318560 46318728 -20349277 - FRAM SINE Alu -14 162 1 2057 118 11 0 chr20 46318807 46319094 -20348911 + AluSx SINE Alu 1 290 -22 196 360 90 9 chr20 46319165 46319276 -20348729 + L2 LINE L2 3185 3304 -9 512 308 35 8 chr20 46319311 46319571 -20348434 - L1M4 LINE L1 -1091 5055 4789 191 281 0 18 chr20 46319571 46319628 -20348377 - MER5A DNA MER1_type -113 76 21 232 83 56 0 chr20 46319583 46319619 -20348386 + MER5B DNA MER1_type 125 162 -16 2147 91 3 0 chr20 46319833 46320118 -20347887 - AluSp SINE Alu -11 302 17 428 168 0 53 chr20 46320186 46320281 -20347724 - L1ME3A LINE L1 -8 6162 6073 893 175 39 104 chr20 46420327 46420607 -20247398 + L1ME3 LINE L1 5895 6156 -6 440 227 62 87 chr20 46420982 46421198 -20246807 + MIR SINE MIR 56 261 -1 676 266 125 83 chr20 46423896 46424690 -20243315 - L2 LINE L2 -1 3271 2444 505 366 56 15 chr20 46424691 46425101 -20242904 - L2 LINE L2 -1217 2097 1671 833 294 17 8 chr20 46425512 46425750 -20242255 - MIR SINE MIR -21 241 2 775 229 37 94 chr20 46426607 46426782 -20241223 - L3 LINE CR1 -14 1563 1380 2140 104 0 0 chr20 46426782 46427091 -20240914 - AluSg SINE Alu 0 309 1 1540 180 17 7 chr20 46427093 46427393 -20240612 - AluJo SINE Alu -8 304 2 775 229 37 94 chr20 46427393 46427458 -20240547 - L3 LINE CR1 -198 1379 1333 192 276 0 86 chr20 46428008 46428066 -20239939 - L2 LINE L2 -14 3299 3247 240 35 0 0 chr20 46428342 46428371 -20239634 + (CA)n Simple_repeat Simple_repeat 1 29 0 267 211 68 58 chr20 46428757 46428866 -20239139 + MIR SINE MIR 117 236 -26 331 295 126 11 chr20 46428941 46429124 -20238881 - MIR SINE MIR -10 252 49 216 0 0 0 chr20 46429309 46429333 -20238672 + (T)n Simple_repeat Simple_repeat 1 24 0 306 305 145 0 chr20 46430186 46430317 -20237688 + L3 LINE CR1 1417 1566 -11 191 360 27 0 chr20 46431014 46431089 -20236916 + L2 LINE L2 2715 2791 -523 391 233 75 13 chr20 46431352 46431502 -20236503 + MIR SINE MIR 34 192 -63 1699 165 47 30 chr20 46431992 46432289 -20235716 - AluJo SINE Alu -10 302 1 353 251 187 12 chr20 46432700 46432951 -20235054 - L1ME4a LINE L1 -2 6119 5825 517 264 137 9 chr20 46433137 46433349 -20234656 - L1ME4a LINE L1 -293 5828 5590 1080 199 42 5 chr20 46433760 46433976 -20234029 - MER58A DNA MER1_type 0 224 1 302 292 26 53 chr20 46434115 46434228 -20233777 + MIR SINE MIR 74 183 -79 460 337 86 5 chr20 46434270 46434457 -20233548 + MIR3 SINE MIR 4 205 -3 225 188 31 16 chr20 46436733 46436797 -20231208 + (TTA)n Simple_repeat Simple_repeat 1 65 0 2386 92 0 3 chr20 46437671 46437964 -20230041 + AluSq SINE Alu 1 292 -21 359 235 294 0 chr20 46438080 46438216 -20229789 + MIR SINE MIR 66 241 -21 468 263 109 0 chr20 46439315 46439471 -20228534 + MER3 DNA MER1_type 37 209 0 1101 208 42 8 chr20 46439535 46439800 -20228205 - MER33 DNA MER1_type 0 324 51 905 207 62 0 chr20 46439954 46440147 -20227858 + MER3 DNA MER1_type 5 209 0 274 207 27 36 chr20 46440526 46440637 -20227368 + GA-rich Low_complexity Low_complexity 2 111 0 247 250 73 40 chr20 46442074 46442198 -20225807 - L2 LINE L2 -12 3260 3133 1831 144 19 55 chr20 46442726 46443038 -20224967 + AluJo SINE Alu 1 301 -11 354 289 205 12 chr20 46444080 46444246 -20223759 - L1ME4a LINE L1 -54 6067 5870 2047 118 0 0 chr20 46444309 46444581 -20223424 - AluSq SINE Alu -5 308 37 243 308 126 31 chr20 46444604 46444763 -20223242 - MIR SINE MIR -67 195 22 240 191 124 11 chr20 46445656 46445745 -20222260 + MIR SINE MIR 39 137 -71 703 258 98 22 chr20 46445860 46446085 -20221920 + MIR SINE MIR 13 254 -8 1706 233 107 63 chr20 46446642 46446960 -20221045 - L1MC5 LINE L1 -49 7912 7610 378 0 0 0 chr20 46446960 46447002 -20221003 + (CA)n Simple_repeat Simple_repeat 2 43 0 1706 233 107 63 chr20 46447002 46447586 -20220419 - L1MC5 LINE L1 -351 7610 6970 189 74 0 0 chr20 46451079 46451106 -20216899 + (CA)n Simple_repeat Simple_repeat 1 27 0 228 107 0 89 chr20 46452429 46452485 -20215520 + (CCCCG)n Simple_repeat Simple_repeat 4 54 0 1298 290 152 29 chr20 46453182 46453895 -20214110 - L2 LINE L2 -591 2723 1884 2176 95 44 0 chr20 46453895 46454190 -20213815 + AluSp SINE Alu 1 308 -5 1298 290 152 29 chr20 46454190 46454339 -20213666 - L2 LINE L2 -1430 1884 1755 500 263 68 0 chr20 46454389 46454522 -20213483 - MIR SINE MIR -119 143 2 182 171 57 0 chr20 46454801 46454836 -20213169 + L3 LINE CR1 1528 1564 -13 979 201 5 27 chr20 46455192 46455416 -20212589 + MER20 DNA MER1_type 1 219 0 1174 240 68 57 chr20 46455443 46455973 -20212032 - L2 LINE L2 -596 2718 2183 1666 283 126 14 chr20 46455981 46456112 -20211893 - MER20B DNA MER1_type -7 776 661 2425 79 3 16 chr20 46456112 46456427 -20211578 + AluSp SINE Alu 1 311 -2 1666 283 126 14 chr20 46456427 46456955 -20211050 - MER20B DNA MER1_type -122 661 43 407 306 122 40 chr20 46457558 46458045 -20209960 - L2 LINE L2 -93 3179 2652 1073 168 0 0 chr20 46459367 46459528 -20208477 + FRAM SINE Alu 1 156 -20 861 229 36 27 chr20 46459653 46459876 -20208129 + MIR SINE MIR 28 252 -10 212 235 161 25 chr20 46460379 46460460 -20207545 - L2 LINE L2 -21 3251 3160 183 280 127 68 chr20 46460954 46461072 -20206933 - MIR3 SINE MIR -2 206 82 217 251 6 0 chr20 46461204 46461261 -20206744 - MIR SINE MIR -48 160 101 2346 82 3 3 chr20 46461272 46461564 -20206441 - AluSg SINE Alu -18 292 1 508 336 118 19 chr20 46462210 46462339 -20205666 - L2 LINE L2 0 3272 3157 366 23 0 0 chr20 46462339 46462382 -20205623 + (CA)n Simple_repeat Simple_repeat 2 44 0 508 336 118 19 chr20 46462382 46462618 -20205387 - L2 LINE L2 -115 3157 2871 304 297 0 20 chr20 46462642 46462743 -20205262 - MIR SINE MIR -72 136 38 481 297 18 6 chr20 46462745 46462910 -20205095 - MIR3 SINE MIR -3 205 39 210 300 14 0 chr20 46463146 46463216 -20204789 + MIR SINE MIR 64 134 -74 1101 187 5 5 chr20 46463290 46463488 -20204517 + MER20 DNA MER1_type 22 219 0 303 301 57 24 chr20 46463608 46463731 -20204274 + MIR SINE MIR 77 203 -59 664 244 63 19 chr20 46463736 46463974 -20204031 + MIR SINE MIR 17 262 0 2361 106 3 0 chr20 46463992 46464303 -20203702 - AluSx SINE Alu 0 312 1 205 115 58 58 chr20 46464570 46464622 -20203383 + CT-rich Low_complexity Low_complexity 6 57 0 1467 116 5 0 chr20 46464818 46465034 -20202971 - MER20 DNA MER1_type -2 217 1 365 278 135 8 chr20 46465640 46465773 -20202232 - L2 LINE L2 0 3272 3123 2598 242 102 33 chr20 46465802 46466967 -20201038 - L2 LINE L2 -6 3307 2065 186 388 55 16 chr20 46466985 46467168 -20200837 - L2 LINE L2 -159 3113 2924 718 297 45 74 chr20 46467320 46467906 -20200099 + L2 LINE L2 2510 3081 -191 549 257 35 66 chr20 46467966 46468192 -20199813 - MIR SINE MIR 0 262 45 324 289 149 0 chr20 46468186 46468307 -20199698 + L2 LINE L2 3134 3272 0 * 237 314 51 17 chr20 46469044 46469162 -20198843 + MIR SINE MIR 90 211 -51 326 228 35 4 chr20 46469288 46469414 -20198591 - MIR SINE MIR -52 210 79 361 330 8 8 chr20 46469420 46469538 -20198467 + L2 LINE L2 3147 3264 -8 222 121 0 0 chr20 46469620 46469653 -20198352 + MIR SINE MIR 38 70 -138 942 167 27 59 chr20 46469699 46469921 -20198084 - MER20 DNA MER1_type -4 215 1 217 289 0 0 chr20 46470795 46470847 -20197158 + L2 LINE L2 3210 3261 -11 233 119 24 0 chr20 46471440 46471482 -20196523 + (TG)n Simple_repeat Simple_repeat 1 43 0 363 213 47 16 chr20 46471667 46471775 -20196230 + MIR SINE MIR 38 147 -61 381 333 111 0 chr20 46471851 46472013 -20195992 - MIR SINE MIR -75 187 8 184 304 76 11 chr20 46473078 46473170 -20194835 + L2 LINE L2 3175 3272 0 288 269 216 30 chr20 46473270 46473437 -20194568 + MIR SINE MIR 47 244 -18 247 281 51 102 chr20 46474005 46474201 -20193804 + L2 LINE L2 2597 2782 -532 278 227 82 45 chr20 46474551 46474661 -20193344 - MIR3 SINE MIR -92 116 3 2113 120 0 0 chr20 46474883 46475159 -20192846 - AluSx SINE Alu -34 278 3 465 306 28 11 chr20 46475196 46475376 -20192629 + MIR SINE MIR 20 202 -60 27 29 0 0 chr20 46475495 46475529 -20192476 + AT_rich Low_complexity Low_complexity 1 34 0 487 335 37 7 chr20 46475736 46476005 -20192000 - L1ME3 LINE L1 -233 5929 5653 207 389 45 28 chr20 46476078 46476310 -20191695 - MIR SINE MIR -1 261 20 1893 156 9 34 chr20 46476411 46476731 -20191274 + AluJb SINE Alu 1 312 0 267 31 0 0 chr20 46477205 46477237 -20190768 + (TCC)n Simple_repeat Simple_repeat 3 34 0 235 295 133 46 chr20 46477295 46477752 -20190253 + L2 LINE L2 1610 2106 -1208 904 132 0 66 chr20 46478140 46478292 -20189713 - FLAM_C SINE Alu -1 142 1 286 336 10 19 chr20 46478351 46478455 -20189550 + L2 LINE L2 2216 2318 -996 391 259 7 56 chr20 46478654 46478797 -20189208 + MIR SINE MIR 127 262 0 409 315 72 20 chr20 46478833 46479084 -20188921 + L2 LINE L2 2556 2819 -495 303 342 132 32 chr20 46479256 46479627 -20188378 + L2 LINE L2 2898 3305 -8 1157 273 76 22 chr20 46479636 46480180 -20187825 - L2 LINE L2 0 3313 2746 2657 199 21 26 chr20 46480186 46480805 -20187200 - L1MB7 LINE L1 -10 6174 5559 190 300 0 0 chr20 46480807 46480857 -20187148 - L2 LINE L2 -635 2679 2630 339 186 0 14 chr20 46481773 46481843 -20186162 - L2 LINE L2 0 3313 3245 325 297 51 93 chr20 46481888 46482242 -20185763 + L1MEd LINE L1 44 382 -5737 299 276 35 11 chr20 46482480 46482567 -20185438 - L2 LINE L2 -50 3222 3134 1413 273 105 0 chr20 46482572 46483107 -20184898 + L2 LINE L2 1882 2472 -842 1296 310 176 7 chr20 46483121 46483951 -20184054 - L2 LINE L2 -740 2574 1605 402 294 14 35 chr20 46484059 46484202 -20183803 + MIR SINE MIR 123 262 0 492 261 100 37 chr20 46484246 46484460 -20183545 - MIR SINE MIR 0 262 34 351 232 32 21 chr20 46484482 46484577 -20183428 + L2 LINE L2 2194 2289 -1025 423 256 45 40 chr20 46485137 46485313 -20182692 + L2 LINE L2 2886 3062 -210 258 310 43 52 chr20 46485318 46485434 -20182571 - L2 LINE L2 -12 3260 3146 554 265 121 10 chr20 46485649 46485874 -20182131 + MIR SINE MIR 15 258 -4 232 235 255 0 chr20 46485926 46486024 -20181981 + MIR3 SINE MIR 76 198 -10 193 236 36 0 chr20 46486275 46486330 -20181675 + L3 LINE CR1 1413 1469 -108 288 285 139 28 chr20 46486385 46486529 -20181476 + MIR SINE MIR 38 197 -65 612 275 57 4 chr20 46487228 46487485 -20180520 + LTR16A LTR ERVL 172 456 -1 241 287 128 0 chr20 46487556 46487650 -20180355 - MIR SINE MIR -122 140 35 * 259 255 0 0 chr20 46487638 46487689 -20180316 - MIR3 SINE MIR -51 157 107 201 381 38 0 chr20 46487774 46487879 -20180126 + MIR SINE MIR 77 185 -77 608 293 69 5 chr20 46488096 46488284 -20179721 + MIR SINE MIR 22 221 -41 288 91 0 0 chr20 46489326 46489370 -20178635 + (TG)n Simple_repeat Simple_repeat 1 44 0 323 299 11 0 chr20 46489424 46489511 -20178494 + GA-rich Low_complexity Low_complexity 3 90 0 640 171 109 43 chr20 46489511 46489721 -20178284 + L1ME3A LINE L1 5754 5977 -193 206 222 22 0 chr20 46489969 46490014 -20177991 + GA-rich Low_complexity Low_complexity 2 47 0 355 179 47 0 chr20 46490377 46490483 -20177522 + (TG)n Simple_repeat Simple_repeat 1 111 0 520 208 130 7 chr20 46490665 46490819 -20177186 + MIR SINE MIR 38 210 -52 228 213 0 0 chr20 46490867 46490914 -20177091 + MIR SINE MIR 216 262 0 550 202 42 0 chr20 46491074 46491193 -20176812 + MIR SINE MIR 134 257 -5 597 310 108 11 chr20 46491203 46491584 -20176421 + L2 LINE L2 2445 2862 -452 528 274 101 59 chr20 46491646 46491846 -20176159 + L2 LINE L2 2995 3214 -99 351 65 0 0 chr20 46491846 46491892 -20176113 + (CA)n Simple_repeat Simple_repeat 1 46 0 528 274 101 59 chr20 46491892 46491997 -20176008 + L2 LINE L2 3214 3313 0 192 125 0 0 chr20 46492063 46492095 -20175910 + (TCCA)n Simple_repeat Simple_repeat 1 32 0 254 336 0 0 chr20 46492295 46492426 -20175579 - L2 LINE L2 -223 3049 2919 719 282 36 5 chr20 46492533 46492728 -20175277 + MIR SINE MIR 12 212 -50 204 265 0 0 chr20 46493216 46493265 -20174740 - L2 LINE L2 -17 3296 3248 203 250 0 0 chr20 46493901 46493945 -20174060 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 623 282 36 52 chr20 46494024 46494272 -20173733 - MIR SINE MIR 0 262 19 578 308 147 32 chr20 46494947 46495389 -20172616 - MLT1L LTR MaLR -115 500 8 334 255 72 33 chr20 46495538 46495691 -20172314 + L2 LINE L2 2933 3091 -181 186 254 36 18 chr20 46495815 46495870 -20172135 + MIR SINE MIR 201 256 -6 258 238 48 16 chr20 46495959 46496022 -20171983 + L2 LINE L2 3249 3313 0 228 351 45 15 chr20 46496060 46496194 -20171811 + L2 LINE L2 3134 3271 -1 561 278 51 0 chr20 46497064 46497240 -20170765 + L2 LINE L2 1803 1987 -1327 2130 236 121 61 chr20 46497302 46497982 -20170023 + L2 LINE L2 1949 2587 -726 1836 141 41 14 chr20 46497982 46498273 -20169732 - AluJb SINE Alu -13 299 1 2078 140 0 19 chr20 46498273 46498580 -20169425 - AluJo SINE Alu -11 301 1 2130 236 121 61 chr20 46498580 46499171 -20168834 + L2 LINE L2 2586 3313 0 2080 121 35 0 chr20 46499987 46500277 -20167728 + AluSx SINE Alu 1 300 -12 948 280 56 43 chr20 46500421 46500722 -20167283 + L2 LINE L2 2915 3224 -89 2253 128 3 0 chr20 46500722 46501026 -20166979 - AluSq SINE Alu -8 305 1 948 280 56 43 chr20 46501026 46501117 -20166888 + L2 LINE L2 3224 3312 -1 233 286 92 31 chr20 46503423 46503521 -20164484 + L2 LINE L2 3146 3249 -23 22 56 0 0 chr20 46503739 46503775 -20164230 + GC_rich Low_complexity Low_complexity 1 36 0 228 163 0 0 chr20 46504060 46504103 -20163902 + (CTG)n Simple_repeat Simple_repeat 1 43 0 377 311 114 41 chr20 46504580 46505044 -20162961 + L2 LINE L2 2728 3223 -49 216 0 0 0 chr20 46505070 46505094 -20162911 + (TGAA)n Simple_repeat Simple_repeat 1 24 0 256 299 0 13 chr20 46505369 46505446 -20162559 - L2 LINE L2 -227 3045 2970 207 0 0 0 chr20 46505830 46505853 -20162152 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 278 224 158 0 chr20 46505890 46505966 -20162039 - MIR SINE MIR -88 120 33 570 318 19 28 chr20 46506053 46506264 -20161741 + MIR SINE MIR 6 214 -48 228 331 207 8 chr20 46506310 46506431 -20161574 - MIR SINE MIR -67 195 51 1968 125 42 14 chr20 46506467 46506755 -20161250 - AluSx SINE Alu -13 299 4 321 270 24 8 chr20 46507140 46507266 -20160739 - MIR SINE MIR -60 148 21 787 282 20 20 chr20 46507540 46507626 -20160379 + MIR SINE MIR 14 99 -163 1793 126 91 13 chr20 46507626 46507944 -20160061 + MER2 DNA MER2_type 1 343 -1 787 282 20 20 chr20 46507944 46508105 -20159900 + MIR SINE MIR 98 261 -1 21 0 0 0 chr20 46508854 46508875 -20159130 + AT_rich Low_complexity Low_complexity 1 21 0 340 313 80 13 chr20 46509368 46509518 -20158487 + MIR SINE MIR 67 226 -36 232 245 245 0 chr20 46509633 46509727 -20158278 - L2 LINE L2 0 3313 3197 207 309 92 70 chr20 46509784 46510056 -20157949 - L2 LINE L2 -4 3268 2991 539 255 116 19 chr20 46510185 46510401 -20157604 - MIR SINE MIR -6 256 20 270 252 174 26 chr20 46510681 46510796 -20157209 + MIR SINE MIR 119 250 -12 292 318 62 23 chr20 46511222 46511351 -20156654 - MIR SINE MIR -70 192 59 371 265 65 0 chr20 46511355 46511488 -20156517 + MIR SINE MIR 65 208 -54 235 274 155 0 chr20 46512174 46512258 -20155747 - MIR3 SINE MIR -27 181 85 191 302 0 0 chr20 46512473 46512516 -20155489 - MIR SINE MIR 0 262 220 415 301 32 21 chr20 46512763 46512949 -20155056 - MIR SINE MIR -39 223 36 226 286 54 54 chr20 46513087 46513199 -20154806 + MIR SINE MIR 131 242 -20 516 193 248 7 chr20 46513343 46513488 -20154517 + MER5A DNA MER1_type 10 189 0 244 297 57 46 chr20 46513563 46513836 -20154169 - L2 LINE L2 -211 3061 2658 913 206 70 15 chr20 46614375 46614574 -20053431 - MER63A DNA MER1_type 0 210 1 220 231 150 82 chr20 46615124 46615271 -20052734 - MIR3 SINE MIR -48 160 4 294 338 26 46 chr20 46615311 46615462 -20052543 + MIR SINE MIR 4 151 -111 241 324 48 19 chr20 46615651 46615756 -20052249 + MIR SINE MIR 154 261 -1 1459 285 65 12 chr20 46616224 46616704 -20051301 + MLT1K LTR MaLR 82 586 -2 22 35 0 0 chr20 46617072 46617101 -20050904 + AT_rich Low_complexity Low_complexity 1 29 0 590 274 58 45 chr20 46617104 46617327 -20050678 - L1ME LINE L1 -484 5637 5412 43 71 0 0 chr20 46617361 46617446 -20050559 + AT_rich Low_complexity Low_complexity 1 85 0 1936 166 0 10 chr20 46617684 46617997 -20050008 - AluJb SINE Alu -1 311 2 197 351 0 0 chr20 46618556 46618630 -20049375 + MIR SINE MIR 189 262 0 892 110 22 37 chr20 46618740 46618876 -20049129 - AluSq/x SINE Alu -179 134 1 3120 171 64 18 chr20 46618876 46619225 -20048780 - L1MB4 LINE L1 -44 6136 5744 1863 156 24 7 chr20 46619225 46619513 -20048492 + AluJb SINE Alu 8 300 -12 3120 171 64 18 chr20 46619513 46619790 -20048215 - L1MB4 LINE L1 -436 5744 5481 185 260 142 16 chr20 46619806 46619933 -20048072 - L2 LINE L2 0 3313 3171 192 135 0 0 chr20 46620906 46620943 -20047062 + (A)n Simple_repeat Simple_repeat 1 37 0 710 329 60 60 chr20 46621720 46622093 -20045912 + L2 LINE L2 2353 2724 -548 1088 171 0 12 chr20 46622093 46622263 -20045742 - FAM SINE Alu -7 168 1 710 329 60 60 chr20 46622263 46622736 -20045269 + L2 LINE L2 2724 3268 -4 1850 136 28 7 chr20 46626687 46626974 -20041031 - AluJb SINE Alu -19 293 1 23 0 0 0 chr20 46627073 46627096 -20040909 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr20 46629779 46629806 -20038199 + AT_rich Low_complexity Low_complexity 1 27 0 23 33 0 0 chr20 46630269 46630299 -20037706 + AT_rich Low_complexity Low_complexity 1 30 0 1520 158 77 14 chr20 46632889 46633321 -20034684 + LTR54 LTR ERV1 1 510 0 738 303 56 16 chr20 46633830 46634081 -20033924 - MIR SINE MIR 0 262 2 253 301 117 10 chr20 46634700 46634803 -20033202 - L2 LINE L2 -1 3271 3158 1694 140 14 4 chr20 46634813 46635091 -20032914 - AluJo SINE Alu -31 281 1 197 302 151 36 chr20 46635278 46635503 -20032502 - L2 LINE L2 -212 3060 2810 887 155 58 23 chr20 46635768 46635942 -20032063 - AluJb SINE Alu -132 180 1 397 224 86 26 chr20 46636624 46636740 -20031265 - MER103 DNA DNA -41 125 3 287 309 32 24 chr20 46636773 46636896 -20031109 + MIR SINE MIR 75 198 -64 2025 98 57 3 chr20 46637240 46637536 -20030469 + AluSp SINE Alu 1 312 -1 279 133 0 0 chr20 46637723 46637768 -20030237 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 226 247 112 82 chr20 46638699 46638869 -20029136 - MER113 DNA MER1_type? -346 175 1 316 325 38 43 chr20 46640587 46640796 -20027209 - L2 LINE L2 0 3313 3106 198 325 179 0 chr20 46640817 46640940 -20027065 + MIR SINE MIR 118 262 0 245 350 136 0 chr20 46641110 46641250 -20026755 - L2 LINE L2 -15 3298 3140 341 180 169 34 chr20 46641352 46641441 -20026564 - MIR SINE MIR -1 261 161 8843 117 109 27 chr20 46641441 46643001 -20025004 + pTR5 LTR ERV1 751 2438 0 344 264 142 32 chr20 46643001 46643156 -20024849 - MIR SINE MIR -90 172 1 180 219 0 0 chr20 46643511 46643543 -20024462 + L2 LINE L2 3240 3271 -1 180 0 0 0 chr20 46643777 46643797 -20024208 + (T)n Simple_repeat Simple_repeat 1 20 0 25 31 0 0 chr20 46643895 46643927 -20024078 + AT_rich Low_complexity Low_complexity 1 32 0 1439 114 14 9 chr20 46643956 46644176 -20023829 - AluJb SINE Alu -91 221 1 2087 82 24 0 chr20 46644227 46644518 -20023487 - AluSg SINE Alu -12 298 1 882 208 35 5 chr20 46644648 46644850 -20023155 + L1ME3 LINE L1 5953 6160 -2 277 257 0 43 chr20 46644873 46644943 -20023062 + MIR SINE MIR 29 95 -167 395 296 46 0 chr20 46644945 46645053 -20022952 - L2 LINE L2 -1 3312 3200 377 244 139 0 chr20 46645060 46645175 -20022830 + MIR SINE MIR 117 247 -15 288 268 55 84 chr20 46645185 46645334 -20022671 - MIR SINE MIR -57 151 9 1559 194 0 0 chr20 46645490 46645784 -20022221 + AluJo SINE Alu 11 304 -8 585 132 105 0 chr20 46645790 46645904 -20022101 - MER53 DNA DNA -63 126 1 405 250 57 14 chr20 46645907 46646018 -20021987 - HAL1b LINE L1 -297 1051 931 1830 169 0 0 chr20 46646018 46646326 -20021679 - AluJb SINE Alu -4 308 1 405 250 57 14 chr20 46646326 46646354 -20021651 - HAL1b LINE L1 -417 931 906 201 267 0 0 chr20 46646434 46646479 -20021526 - MIR SINE MIR -65 197 153 2179 117 0 0 chr20 46646615 46646924 -20021081 + AluSq SINE Alu 1 309 -4 1584 150 17 28 chr20 46647008 46647295 -20020710 - AluJo SINE Alu -15 297 14 633 280 67 56 chr20 46647382 46647468 -20020537 - L1ME2 LINE L1 -252 5912 5828 900 209 81 0 chr20 46647468 46647640 -20020365 + MER5A DNA MER1_type 4 189 0 633 280 67 56 chr20 46647640 46647752 -20020253 - L1ME2 LINE L1 -336 5828 5719 2063 108 17 0 chr20 46647752 46648047 -20019958 - AluSq SINE Alu -13 300 1 633 280 67 56 chr20 46648047 46648699 -20019306 - L1ME2 LINE L1 -445 5719 5052 357 263 0 0 chr20 46648700 46648780 -20019225 - MIR SINE MIR -99 163 84 251 175 0 18 chr20 46649033 46649090 -20018915 - L1MC4 LINE L1 -7 8035 7980 827 156 0 15 chr20 46649101 46649236 -20018769 + AluJ SINE Alu 13 145 -167 885 176 0 7 chr20 46649973 46650126 -20017879 + AluJ SINE Alu 129 280 -32 468 174 0 0 chr20 46650126 46650218 -20017787 + GA-rich Low_complexity Low_complexity 1 92 0 1963 125 0 34 chr20 46650225 46650546 -20017459 + AluSg SINE Alu 1 310 0 231 185 74 0 chr20 46650553 46650607 -20017398 - L1MC4 LINE L1 -64 7978 7921 1768 133 18 39 chr20 46650643 46650973 -20017032 - L1MC4 LINE L1 -289 7753 7431 2158 107 7 0 chr20 46651118 46651416 -20016589 + AluSq SINE Alu 1 300 -13 538 313 53 18 chr20 46651671 46651898 -20016107 + MIR SINE MIR 12 246 -16 1727 172 57 85 chr20 46652377 46652810 -20015195 + MLT1D LTR MaLR 1 404 -63 1910 134 16 10 chr20 46652987 46653293 -20014712 - AluSx SINE Alu -2 310 3 29 0 0 0 chr20 46653821 46653850 -20014155 + AT_rich Low_complexity Low_complexity 1 29 0 730 212 192 36 chr20 46654164 46654450 -20013555 - MLT1G LTR MaLR -289 301 1 689 288 153 14 chr20 46654467 46654897 -20013108 + L2 LINE L2 2487 2976 -338 316 211 78 11 chr20 46654967 46655057 -20012948 + MLT1C LTR MaLR 88 183 -284 1161 243 25 0 chr20 46655098 46655337 -20012668 + MIR SINE MIR 3 247 -15 2150 188 32 22 chr20 46655528 46655990 -20012015 + Charlie4a DNA MER1_type 39 505 -3 785 209 28 28 chr20 46656051 46656233 -20011772 - MIR SINE MIR -19 243 62 2026 104 18 0 chr20 46656255 46656535 -20011470 + AluSg SINE Alu 6 290 -20 398 313 69 0 chr20 46656539 46656670 -20011335 - MIR SINE MIR -74 188 49 849 163 0 0 chr20 46657507 46657636 -20010369 - FLAM_C SINE Alu -4 129 1 869 240 29 15 chr20 46657656 46657860 -20010145 - MER3 DNA MER1_type 0 209 3 224 259 17 0 chr20 46657999 46658057 -20009948 + MIR SINE MIR 82 140 -68 393 299 175 0 chr20 46658100 46658254 -20009751 - MIR SINE MIR -67 195 15 1584 221 60 46 chr20 46658315 46658749 -20009256 - LTR16C LTR ERVL -14 477 38 2170 133 6 32 chr20 46658891 46659237 -20008768 + MER1B DNA MER1_type 1 337 0 193 244 0 0 chr20 46659358 46659399 -20008606 + L2 LINE L2 3273 3313 0 977 323 58 12 chr20 46659419 46659992 -20008013 + L1MC4a LINE L1 5299 5897 -1911 803 174 0 0 chr20 46660111 46660243 -20007762 + FRAM SINE Alu 1 40 0 1354 197 108 36 chr20 46661011 46661372 -20006633 - MLT1F1 LTR MaLR 0 567 181 741 78 82 0 chr20 46661384 46661703 -20006302 + GA-rich Low_complexity Low_complexity 1 345 0 649 210 8 8 chr20 46661751 46661875 -20006130 - FLAM_C SINE Alu -18 125 2 717 244 6 6 chr20 46661884 46662040 -20005965 - MLT1F1 LTR MaLR -386 156 1 471 289 69 23 chr20 46662219 46662437 -20005568 - L2 LINE L2 -167 3146 2919 248 320 66 25 chr20 46662897 46663019 -20004986 - L2 LINE L2 -3 3269 3143 328 246 8 74 chr20 46664167 46664289 -20003716 - L2 LINE L2 -218 3054 2941 22 35 0 0 chr20 46664910 46664939 -20003066 + AT_rich Low_complexity Low_complexity 1 29 0 192 77 0 0 chr20 46665316 46665342 -20002663 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 255 315 145 51 chr20 46665382 46666016 -20001989 - L2 LINE L2 -83 3189 2501 204 304 156 37 chr20 46666110 46666245 -20001760 - MIR3 SINE MIR -15 193 43 2265 83 6 10 chr20 46666291 46666603 -20001402 + AluSx SINE Alu 1 311 -1 186 118 0 0 chr20 46666610 46666644 -20001361 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1629 140 10 52 chr20 46666773 46667081 -20000924 - AluJo SINE Alu -17 295 1 2264 93 3 0 chr20 46667098 46667409 -20000596 - AluSx SINE Alu 0 312 1 204 234 0 16 chr20 46667440 46667504 -20000501 + (TGGA)n Simple_repeat Simple_repeat 1 63 0 515 278 62 8 chr20 46669392 46669595 -19998410 - MIR SINE MIR -13 249 19 662 262 124 24 chr20 46669985 46670195 -19997810 - MIR SINE MIR -12 250 20 987 232 99 31 chr20 46670216 46670547 -19997458 - MER113 DNA MER1_type? -41 480 122 2096 128 0 0 chr20 46670547 46670845 -19997160 + AluSx SINE Alu 1 298 -14 987 232 99 31 chr20 46670845 46670866 -19997139 - MER113 DNA MER1_type? -399 122 104 453 212 159 39 chr20 46670892 46671080 -19996925 + MIR3 SINE MIR 5 205 -3 2024 99 7 7 chr20 46673781 46674074 -19993931 + AluSq SINE Alu 1 293 -20 1829 49 0 5 chr20 46674278 46674502 -19993503 - AluY SINE Alu -88 223 1 262 171 281 37 chr20 46674574 46674656 -19993349 + MIR SINE MIR 108 209 -53 2324 81 0 13 chr20 46674699 46675007 -19992998 + AluSc SINE Alu 1 304 -5 190 311 49 0 chr20 46675410 46675471 -19992534 + L2 LINE L2 2990 3053 -219 1000 166 18 65 chr20 46675483 46675712 -19992293 + MER20 DNA MER1_type 1 218 -1 513 218 53 8 chr20 46676235 46676368 -19991637 + MIR SINE MIR 35 173 -89 943 66 0 0 chr20 46676458 46676580 -19991425 + L1PA4 LINE L1 6031 6152 -3 1150 211 48 59 chr20 46676640 46677061 -19990944 + MER96B DNA MER1_type 2 417 0 568 303 77 28 chr20 46677061 46677461 -19990544 - Charlie8 DNA MER1_type -2191 226 1 207 0 0 0 chr20 46677740 46677763 -19990242 + (T)n Simple_repeat Simple_repeat 1 23 0 522 252 16 29 chr20 46678836 46679001 -19989004 + L1ME1 LINE L1 5677 5830 -336 398 229 76 15 chr20 46679518 46679649 -19988356 - MIR3 SINE MIR -59 149 11 180 77 0 0 chr20 46679866 46679892 -19988113 + (GGGGA)n Simple_repeat Simple_repeat 2 27 0 321 292 0 12 chr20 46680328 46680424 -19987581 + MIR SINE MIR 58 151 -65 2116 96 4 0 chr20 46680492 46680828 -19987177 + AluSq SINE Alu 1 337 0 275 301 106 0 chr20 46680878 46681001 -19987004 - MIR3 SINE MIR -21 187 52 688 207 43 7 chr20 46681037 46681177 -19986828 - MER5A DNA MER1_type -44 145 1 243 0 0 0 chr20 46681185 46681212 -19986793 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1815 113 4 7 chr20 46681221 46681496 -19986509 - AluSx SINE Alu -38 274 1 1185 239 88 26 chr20 46681526 46681911 -19986094 + LTR16C LTR ERVL 69 477 -14 258 338 96 0 chr20 46682009 46682145 -19985860 + MIR3 SINE MIR 39 187 -21 552 271 133 20 chr20 46682517 46682720 -19985285 - MIR SINE MIR -17 245 20 404 270 117 31 chr20 46682798 46682931 -19985074 - Charlie8 DNA MER1_type -2135 282 125 2236 84 0 10 chr20 46682931 46683230 -19984775 - AluY SINE Alu -15 296 1 404 270 117 31 chr20 46683230 46683292 -19984713 - Charlie8 DNA MER1_type -2292 125 70 2080 108 7 7 chr20 46683302 46683609 -19984396 + AluSq SINE Alu 1 307 -6 250 298 0 92 chr20 46684753 46684847 -19983158 - L1MC/D LINE L1 -1899 5909 5831 1725 139 43 4 chr20 46684847 46685128 -19982877 - AluJb SINE Alu -19 293 2 250 298 0 92 chr20 46685128 46685174 -19982831 - L1MC/D LINE L1 -1977 5831 5782 279 315 0 55 chr20 46685266 46685431 -19982574 + C-rich Low_complexity Low_complexity 4 159 0 354 287 129 29 chr20 46686034 46686243 -19981762 - MIR SINE MIR -21 241 12 409 149 7 209 chr20 46686247 46686326 -19981679 + MER5B DNA MER1_type 61 98 -80 2128 107 7 3 chr20 46686326 46686624 -19981381 - AluSx SINE Alu -13 299 1 409 149 7 209 chr20 46686624 46686692 -19981313 + MER5B DNA MER1_type 98 178 0 468 300 125 1 chr20 46687144 46687336 -19980669 - MIR SINE MIR -44 218 3 418 298 195 5 chr20 46690010 46690215 -19977790 - MIR SINE MIR -12 250 7 292 324 168 0 chr20 46690247 46690420 -19977585 + L3 LINE CR1 1328 1529 -48 602 225 25 0 chr20 46690439 46690559 -19977446 + MIR SINE MIR 23 145 -117 230 217 200 0 chr20 46690957 46691017 -19976988 - MER113 DNA MER1_type? -118 403 332 1576 298 172 15 chr20 46691117 46692272 -19975733 + L2 LINE L2 1984 3313 0 266 189 44 22 chr20 46692275 46692365 -19975640 - MER113 DNA MER1_type? -303 218 127 4562 150 36 14 chr20 46692365 46693248 -19974757 + L1MB7 LINE L1 5230 6136 -48 1952 143 0 3 chr20 46693248 46693541 -19974464 + AluJo SINE Alu 1 292 -20 4562 150 36 14 chr20 46693541 46693592 -19974413 + L1MB7 LINE L1 6136 6184 0 212 352 19 9 chr20 46693796 46693904 -19974101 + L2 LINE L2 2877 2985 -287 691 326 98 10 chr20 46693950 46694374 -19973631 - L2 LINE L2 -37 3235 2776 1302 102 0 0 chr20 46694409 46694586 -19973419 + AluSg/x SINE Alu 135 311 -1 567 220 161 0 chr20 46694623 46694791 -19973214 + L2 LINE L2 3117 3311 -2 343 284 94 16 chr20 46694799 46694926 -19973079 + L2 LINE L2 3136 3272 0 374 234 117 9 chr20 46694934 46695045 -19972960 + L2 LINE L2 3140 3262 -10 222 304 58 0 chr20 46695738 46695807 -19972198 + MER91A DNA MER1_type 1 73 -123 310 233 198 0 chr20 46695878 46695964 -19972041 + MER91A DNA MER1_type 93 195 -1 1625 151 50 7 chr20 46696060 46696359 -19971646 - AluJo SINE Alu 0 312 1 366 266 49 56 chr20 46696363 46696506 -19971499 - L2 LINE L2 -3 3269 3128 785 208 94 5 chr20 46696597 46696789 -19971216 + MIR SINE MIR 53 261 -1 273 314 110 8 chr20 46696806 46696924 -19971081 - L2 LINE L2 -20 3252 3123 223 279 76 0 chr20 46697052 46697131 -19970874 + L3 LINE CR1 1404 1488 -89 264 225 25 50 chr20 46697451 46697531 -19970474 + MIR3 SINE MIR 82 159 -49 1628 135 16 55 chr20 46697563 46697874 -19970131 - AluJo SINE Alu -13 299 1 646 301 40 0 chr20 46697880 46698079 -19969926 - MIR SINE MIR -9 253 47 370 136 0 0 chr20 46699124 46699183 -19968822 - MADE1 DNA Mariner -21 59 1 2108 96 3 3 chr20 46699596 46699888 -19968117 - AluSx SINE Alu -19 293 2 542 237 11 57 chr20 46699988 46700165 -19967840 - MIR SINE MIR -27 235 67 419 211 97 6 chr20 46700769 46700927 -19967078 + MIR SINE MIR 11 183 -79 22 0 0 0 chr20 46701069 46701091 -19966914 + AT_rich Low_complexity Low_complexity 1 22 0 2123 114 0 0 chr20 46701786 46702083 -19965922 - AluSx SINE Alu -15 297 1 1582 138 26 8 chr20 46702189 46702457 -19965548 - AluJo SINE Alu -25 287 15 600 192 34 27 chr20 46702472 46702618 -19965387 - MIR SINE MIR -99 163 17 231 290 234 0 chr20 46703192 46703299 -19964706 + MIR SINE MIR 119 250 -12 338 274 137 0 chr20 46703315 46703417 -19964588 - MIR SINE MIR -51 211 96 594 271 133 52 chr20 46704364 46704785 -19963220 + L2 LINE L2 2859 3313 0 308 320 183 26 chr20 46704944 46705288 -19962717 + L2 LINE L2 2804 3201 -71 315 266 0 0 chr20 46705330 46705394 -19962611 + MIR SINE MIR 18 81 -181 946 198 69 50 chr20 46705396 46705700 -19962305 + MLT1F1 LTR MaLR 3 304 -241 317 211 0 0 chr20 46705694 46705751 -19962254 + MLT1F1 LTR MaLR 451 507 -60 * 1919 99 33 0 chr20 46705753 46706051 -19961954 - AluSg SINE Alu 0 307 1 648 235 26 47 chr20 46706062 46706138 -19961867 + MIR SINE MIR 73 149 -113 1896 119 3 14 chr20 46706138 46706453 -19961552 + AluSx SINE Alu 1 312 0 648 235 26 47 chr20 46706453 46706568 -19961437 + MIR SINE MIR 149 261 -1 543 261 117 33 chr20 46706729 46706909 -19961096 - MIR SINE MIR -33 229 35 317 294 71 16 chr20 46707506 46707632 -19960373 - MIR SINE MIR -80 182 50 279 298 61 30 chr20 46708192 46708323 -19959682 - MIR SINE MIR -24 238 104 785 182 40 34 chr20 46708718 46708894 -19959111 + MER58A DNA MER1_type 45 221 -3 239 197 16 0 chr20 46708979 46709040 -19958965 - MIR SINE MIR -82 126 65 1406 252 50 18 chr20 46709167 46709607 -19958398 - MER113 DNA MER1_type? -67 454 1 205 222 0 0 chr20 46709759 46709795 -19958210 + MER91A DNA MER1_type 147 182 -8 524 284 60 32 chr20 46710035 46710253 -19957752 + MIR SINE MIR 27 250 -12 231 238 38 88 chr20 46710853 46710933 -19957072 - L2 LINE L2 -10 3262 3187 378 264 38 9 chr20 46710975 46711081 -19956924 - L2 LINE L2 0 3272 3164 210 238 16 48 chr20 46712351 46712414 -19955591 + GA-rich Low_complexity Low_complexity 2 62 0 642 297 71 5 chr20 46712479 46712691 -19955314 + MIR SINE MIR 20 245 -17 267 31 0 0 chr20 46713606 46713638 -19954367 + (TG)n Simple_repeat Simple_repeat 1 32 0 312 306 18 6 chr20 46714078 46714248 -19953757 + (TG)n Simple_repeat Simple_repeat 1 172 0 279 0 0 0 chr20 46714290 46714321 -19953684 + (TG)n Simple_repeat Simple_repeat 1 31 0 1687 192 146 26 chr20 46714538 46714724 -19953281 + MLT1C LTR MaLR 1 163 -304 2160 93 7 0 chr20 46714724 46715058 -19952947 + AluSq SINE Alu 1 313 0 1687 192 146 26 chr20 46715058 46715288 -19952717 + MLT1C LTR MaLR 163 467 0 522 318 30 25 chr20 46715748 46715949 -19952056 - MIR SINE MIR -2 260 59 253 245 10 112 chr20 46715922 46716020 -19951985 - MIR3 SINE MIR -6 202 115 * 251 334 135 26 chr20 46716022 46716438 -19951567 + L2 LINE L2 2087 2547 -767 1454 255 53 55 chr20 46716494 46716968 -19951037 - MLT1J LTR MaLR -2 509 37 220 349 47 0 chr20 46716982 46717068 -19950937 + L2 LINE L2 2624 2713 -601 740 192 16 16 chr20 46717076 46717258 -19950747 + MER53 DNA DNA 1 182 -7 200 337 21 11 chr20 46717563 46717658 -19950347 - MIR3 SINE MIR -100 108 13 211 284 127 75 chr20 46719425 46719559 -19948446 + MIR SINE MIR 80 220 -42 185 263 35 0 chr20 46719601 46719658 -19948347 + MIR SINE MIR 193 251 -11 729 220 82 11 chr20 46720399 46720581 -19947424 + MIR SINE MIR 29 223 -39 504 257 0 0 chr20 46720595 46720704 -19947301 - MIR SINE MIR -72 190 82 1704 176 30 0 chr20 46720706 46720975 -19947030 + AluJo SINE Alu 1 287 -198 195 42 0 0 chr20 46720975 46720999 -19947006 + (GAAA)n Simple_repeat Simple_repeat 1 24 0 1704 176 30 0 chr20 46720999 46721205 -19946800 + AluJo SINE Alu 287 485 0 348 303 49 9 chr20 46721450 46721600 -19946405 + MIR SINE MIR 22 177 -62 362 317 96 39 chr20 46721899 46722180 -19945825 + L2 LINE L2 2827 3123 -149 332 214 71 0 chr20 46722270 46722354 -19945651 + MIR SINE MIR 72 161 -101 616 275 34 34 chr20 46722472 46722679 -19945326 - MIR SINE MIR 0 262 56 1006 200 15 0 chr20 46723183 46723378 -19944627 - MIR SINE MIR 0 262 65 268 311 180 12 chr20 46723377 46723538 -19944467 + MIR SINE MIR 63 250 -12 * 270 156 0 0 chr20 46724276 46724340 -19943665 + C-rich Low_complexity Low_complexity 4 67 0 312 250 173 0 chr20 46724650 46724754 -19943251 + L3 LINE CR1 1354 1475 -102 302 269 124 102 chr20 46724982 46725108 -19942897 + L2 LINE L2 2992 3114 -158 599 204 154 19 chr20 46725108 46725270 -19942735 + MER5A DNA MER1_type 4 187 -2 302 269 124 102 chr20 46725270 46725418 -19942587 + L2 LINE L2 3114 3272 0 1285 264 83 7 chr20 46725457 46725888 -19942117 + L2 LINE L2 1979 2442 -872 223 222 0 37 chr20 46725949 46726003 -19942002 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 257 307 92 6 chr20 46726890 46727062 -19940943 + MIR SINE MIR 2 192 -58 189 0 0 0 chr20 46728027 46728048 -19939957 + (T)n Simple_repeat Simple_repeat 1 21 0 501 256 145 0 chr20 46729090 46729262 -19938743 + MIR SINE MIR 66 262 0 274 263 50 0 chr20 46729328 46729427 -19938578 + L2 LINE L2 2932 3035 -237 263 321 75 38 chr20 46729972 46730131 -19937874 - MIR SINE MIR -7 255 91 1543 177 23 37 chr20 46730178 46730367 -19937638 - AluJb SINE Alu -16 296 111 351 0 0 0 chr20 46730367 46730406 -19937599 + (TG)n Simple_repeat Simple_repeat 2 40 0 1543 177 23 37 chr20 46730406 46730516 -19937489 - AluJb SINE Alu -201 111 1 566 298 129 61 chr20 46730516 46731012 -19936993 - L2 LINE L2 -5 3308 2776 349 115 0 33 chr20 46731019 46731080 -19936925 + (TTCC)n Simple_repeat Simple_repeat 2 60 0 773 175 17 6 chr20 46731080 46731257 -19936748 + CT-rich Low_complexity Low_complexity 1 179 0 1903 159 10 3 chr20 46731259 46731568 -19936437 - AluSx SINE Alu -1 311 1 434 289 8 23 chr20 46731650 46731778 -19936227 - L2 LINE L2 -3 3310 3185 1453 169 37 27 chr20 46732863 46733158 -19934847 - AluJo SINE Alu -1 311 14 525 255 195 26 chr20 46733291 46733543 -19934462 + L2 LINE L2 2804 3117 -196 2038 137 0 0 chr20 46733543 46733850 -19934155 - AluSq SINE Alu -6 307 1 525 255 195 26 chr20 46733850 46733899 -19934106 + L2 LINE L2 3117 3156 -157 332 265 144 39 chr20 46733961 46734142 -19933863 + L2 LINE L2 3111 3310 -3 239 197 131 0 chr20 46734214 46734275 -19933730 - MIR SINE MIR -86 176 108 1950 95 0 18 chr20 46734284 46734536 -19933469 + AluSx SINE Alu 30 285 -27 202 29 57 0 chr20 46734536 46734571 -19933434 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 339 65 0 0 chr20 46734573 46734619 -19933386 + (CA)n Simple_repeat Simple_repeat 1 46 0 1950 95 0 18 chr20 46734619 46734637 -19933368 + AluSx SINE Alu 286 298 -14 478 270 14 15 chr20 46734845 46735016 -19932989 + MIR SINE MIR 12 182 -60 1787 166 10 13 chr20 46735037 46735345 -19932660 + AluJo SINE Alu 1 307 -5 1809 156 36 3 chr20 46735382 46735684 -19932321 + AluJb SINE Alu 1 312 0 242 341 0 0 chr20 46736568 46736653 -19931352 + (CACCAT)n Simple_repeat Simple_repeat 5 89 0 301 188 10 30 chr20 46736666 46736767 -19931238 + (CACCAT)n Simple_repeat Simple_repeat 3 101 0 293 167 65 19 chr20 46736842 46736950 -19931055 + (CACCAT)n Simple_repeat Simple_repeat 1 113 0 344 138 0 38 chr20 46737004 46737084 -19930921 + (CACCAT)n Simple_repeat Simple_repeat 3 79 0 321 305 16 8 chr20 46737095 46737223 -19930782 + (CCA)n Simple_repeat Simple_repeat 3 131 0 219 299 35 0 chr20 46737249 46737336 -19930669 - MIR SINE MIR -56 206 117 540 332 62 26 chr20 46737573 46737851 -19930154 + MIR SINE MIR 4 166 -94 1032 39 78 0 chr20 46737851 46737980 -19930025 - MER85 DNA T2_type 0 139 1 540 332 62 26 chr20 46737980 46738079 -19929926 + MIR SINE MIR 166 260 0 340 197 0 0 chr20 46739318 46739384 -19928621 + MER5B DNA MER1_type 1 66 -112 419 335 31 6 chr20 46739674 46739835 -19928170 - MIR3 SINE MIR -19 189 25 271 201 50 79 chr20 46740294 46740433 -19927572 + MIR3 SINE MIR 31 165 -43 444 325 84 44 chr20 46740452 46740772 -19927233 - L2 LINE L2 -20 3252 2920 481 302 111 0 chr20 46741022 46741194 -19926811 - MIR SINE MIR -70 192 2 200 256 23 58 chr20 46741204 46741290 -19926715 + L2 LINE L2 2979 3061 -211 685 289 98 9 chr20 46741297 46741704 -19926301 + L2 LINE L2 2761 3313 0 189 196 0 0 chr20 46741998 46742049 -19925956 + G-rich Low_complexity Low_complexity 6 56 0 316 265 212 6 chr20 46742734 46742904 -19925101 - L3 LINE CR1 -118 1459 1255 * 322 346 49 35 chr20 46742887 46743231 -19924774 + L2 LINE L2 2620 2968 -346 813 154 7 14 chr20 46743324 46743467 -19924538 + FLAM_C SINE Alu 2 143 0 230 203 0 87 chr20 46744119 46744188 -19923817 + MIR SINE MIR 200 262 0 2227 93 0 0 chr20 46744190 46744481 -19923524 - AluSx SINE Alu -21 291 1 188 305 110 12 chr20 46744546 46744628 -19923377 - MIR SINE MIR -65 143 54 235 250 231 19 chr20 46744684 46744792 -19923213 - L2 LINE L2 0 3313 3183 472 296 19 12 chr20 46745559 46745721 -19922284 + MIR SINE MIR 35 197 -65 1932 134 7 0 chr20 46745734 46746025 -19921980 - AluSx SINE Alu -19 293 1 305 285 78 39 chr20 46746054 46746253 -19921752 + MIR SINE MIR 18 223 -39 284 351 9 0 chr20 46746268 46746379 -19921626 - MIR SINE MIR -12 250 139 319 235 92 50 chr20 46746582 46746701 -19921304 + MIR SINE MIR 35 158 -104 231 36 0 0 chr20 46746747 46746775 -19921230 + (TA)n Simple_repeat Simple_repeat 2 29 0 405 0 0 0 chr20 46747739 46747784 -19920221 + (CA)n Simple_repeat Simple_repeat 2 46 0 1133 253 132 27 chr20 46747785 46748568 -19919437 + L2 LINE L2 2424 3294 -19 413 206 151 16 chr20 46749193 46749319 -19918686 + MIR SINE MIR 78 220 -42 292 143 29 29 chr20 46749338 46749408 -19918597 + CT-rich Low_complexity Low_complexity 2 71 0 2370 64 0 6 chr20 46749414 46749726 -19918279 - AluY SINE Alu -1 310 1 1770 147 0 23 chr20 46749727 46750033 -19917972 - AluJo SINE Alu -13 299 1 182 287 167 0 chr20 46750042 46750150 -19917855 - L2 LINE L2 -229 3043 2918 316 281 14 3 chr20 46750789 46750892 -19917113 + MIR SINE MIR 49 154 -56 414 189 147 21 chr20 46750911 46751054 -19916951 + MIR SINE MIR 32 192 -70 339 264 23 0 chr20 46751363 46751450 -19916555 - L2 LINE L2 0 3272 3184 370 283 4 37 chr20 46751467 46751544 -19916461 - MIR SINE MIR -59 149 97 564 275 63 32 chr20 46751544 46751733 -19916272 + MER91A DNA MER1_type 2 196 0 370 283 4 37 chr20 46751733 46751783 -19916222 - MIR SINE MIR -111 97 47 2514 44 0 0 chr20 46751807 46752104 -19915901 - AluY SINE Alu -14 297 1 195 203 203 31 chr20 46752261 46752325 -19915680 - MIR3 SINE MIR -25 183 109 219 69 0 0 chr20 46752477 46752506 -19915499 + (TCC)n Simple_repeat Simple_repeat 3 31 0 212 151 0 57 chr20 46752686 46752739 -19915266 + GA-rich Low_complexity Low_complexity 4 53 0 287 276 229 24 chr20 46752922 46753132 -19914873 + MIR SINE MIR 9 261 -1 656 246 82 68 chr20 46753440 46753564 -19914441 + MIR SINE MIR 11 141 -121 2229 107 0 3 chr20 46753564 46753874 -19914131 + AluSg SINE Alu 1 309 -1 656 246 82 68 chr20 46753874 46753969 -19914036 + MIR SINE MIR 141 233 -29 541 204 76 15 chr20 46754028 46754160 -19913845 - MIR SINE MIR -102 160 21 561 284 109 12 chr20 46754698 46754971 -19913034 - MIR SINE MIR 0 262 1 417 321 15 0 chr20 46755663 46755800 -19912205 + MIR SINE MIR 13 151 -111 888 256 137 12 chr20 46755969 46756305 -19911700 + L2 LINE L2 2898 3275 -38 280 284 55 0 chr20 46756467 46756576 -19911429 + L2 LINE L2 3145 3259 -13 313 300 94 19 chr20 46757175 46757335 -19910670 + L2 LINE L2 2892 3063 -209 413 223 58 0 chr20 46757395 46757498 -19910507 + MER91C DNA MER1_type 2 110 -30 187 328 35 0 chr20 46757529 46757587 -19910418 + L2 LINE L2 3205 3264 -8 33 25 0 0 chr20 46758013 46758053 -19909952 + AT_rich Low_complexity Low_complexity 1 40 0 2149 86 14 0 chr20 46758053 46758344 -19909661 - AluSq SINE Alu -18 295 1 2120 259 44 32 chr20 46758358 46759374 -19908631 - L2 LINE L2 -2 3311 2291 216 263 0 26 chr20 46759614 46759690 -19908315 + C-rich Low_complexity Low_complexity 1 74 0 209 309 87 16 chr20 46760155 46760281 -19907724 - MIR3 SINE MIR -41 167 33 606 196 116 40 chr20 46760326 46760499 -19907506 - MIR SINE MIR -21 241 56 246 261 176 25 chr20 46761075 46761194 -19906811 + MIR SINE MIR 8 144 -118 796 279 41 16 chr20 46761242 46761486 -19906519 + MIR SINE MIR 12 261 -1 332 298 179 28 chr20 46761615 46761833 -19906172 + L3 LINE CR1 1311 1561 -16 463 264 58 19 chr20 46761976 46762131 -19905874 + MIR SINE MIR 28 188 -74 367 244 193 0 chr20 46762177 46762296 -19905709 + MIR SINE MIR 10 151 -111 477 239 19 63 chr20 46762977 46763136 -19904869 + MIR SINE MIR 98 249 -13 1633 266 22 28 chr20 46763200 46763699 -19904306 - L2 LINE L2 0 3313 2818 492 333 85 23 chr20 46763842 46764383 -19903622 + L2 LINE L2 2660 3231 -41 1129 273 131 15 chr20 46764424 46764896 -19903109 + L1ME3A LINE L1 5424 5950 -220 210 150 50 0 chr20 46765109 46765149 -19902856 + GA-rich Low_complexity Low_complexity 3 44 0 361 300 0 0 chr20 46766622 46766848 -19901157 + (CA)n Simple_repeat Simple_repeat 1 226 0 240 226 0 0 chr20 46766880 46766973 -19901032 + (CA)n Simple_repeat Simple_repeat 1 93 0 328 329 0 6 chr20 46767005 46767166 -19900839 + (CA)n Simple_repeat Simple_repeat 1 160 0 302 221 0 25 chr20 46767179 46767342 -19900663 + (CA)n Simple_repeat Simple_repeat 1 159 0 2124 139 10 0 chr20 46767366 46767675 -19900330 - AluSx SINE Alu 0 312 1 180 228 18 53 chr20 46767757 46767814 -19900191 + MIR SINE MIR 82 136 -72 188 122 24 0 chr20 46768507 46768548 -19899457 + (TG)n Simple_repeat Simple_repeat 2 43 0 418 281 6 84 chr20 46768753 46768882 -19899123 + MIR SINE MIR 42 155 -107 920 169 70 47 chr20 46768882 46769095 -19898910 - MER20 DNA MER1_type 0 219 2 418 281 6 84 chr20 46769095 46769143 -19898862 + MIR SINE MIR 155 205 -57 * 840 253 10 0 chr20 46769131 46769333 -19898672 - MIR SINE MIR 0 262 59 382 298 12 6 chr20 46769413 46769765 -19898240 + GA-rich Low_complexity Low_complexity 1 354 0 180 278 0 19 chr20 46769942 46769996 -19898009 - L2 LINE L2 -20 3252 3200 549 249 195 44 chr20 46770326 46770720 -19897285 + MLT1H LTR MaLR 16 515 -34 231 36 0 0 chr20 46770720 46770748 -19897257 + (T)n Simple_repeat Simple_repeat 1 28 0 1097 229 90 64 chr20 46770784 46771207 -19896798 - MLT1H LTR MaLR -113 436 3 606 248 57 6 chr20 46771428 46771585 -19896420 + MIR SINE MIR 28 192 -70 252 289 155 10 chr20 46771672 46771769 -19896236 + L2 LINE L2 3160 3270 -2 313 310 142 0 chr20 46771813 46771926 -19896079 + L2 LINE L2 3173 3301 -12 207 222 22 0 chr20 46771886 46771931 -19896074 + MIR SINE MIR 217 262 0 * 747 299 19 97 chr20 46772936 46773066 -19894939 + L2 LINE L2 2935 3074 -239 1075 69 35 6 chr20 46773066 46773240 -19894765 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 747 299 19 97 chr20 46773240 46773294 -19894711 + L2 LINE L2 3074 3131 -182 2191 119 3 0 chr20 46773294 46773604 -19894401 - AluSx SINE Alu -1 311 1 747 299 19 97 chr20 46773604 46773829 -19894176 + L2 LINE L2 3131 3313 0 277 315 34 0 chr20 46773828 46773917 -19894088 - MIR SINE MIR -62 200 109 * 288 351 26 9 chr20 46774414 46774528 -19893477 + L2 LINE L2 2634 2749 -565 1570 274 126 5 chr20 46774528 46775133 -19892872 + L1MC4a LINE L1 5485 6162 -1646 300 234 39 117 chr20 46775189 46775317 -19892688 + L1ME4a LINE L1 6002 6119 -2 235 363 36 48 chr20 46775569 46775683 -19892322 + L2 LINE L2 2882 2996 -276 1787 149 11 0 chr20 46775683 46776031 -19891974 - AluJo SINE Alu 0 354 4 235 363 36 48 chr20 46776031 46776083 -19891922 + L2 LINE L2 2996 3047 -225 327 188 16 0 chr20 46776251 46776315 -19891690 + MIR SINE MIR 70 134 -74 201 82 0 115 chr20 46776894 46776955 -19891050 + (CCCCG)n Simple_repeat Simple_repeat 1 54 0 305 350 43 0 chr20 46777283 46777423 -19890582 + MIR SINE MIR 29 174 -88 195 100 0 0 chr20 46778001 46778031 -19889974 + (TGGGGG)n Simple_repeat Simple_repeat 5 34 0 302 300 84 16 chr20 46778655 46778875 -19889130 - MIR3 SINE MIR -16 246 11 612 309 36 5 chr20 46778935 46779129 -19888876 + MIR SINE MIR 63 262 0 666 229 19 19 chr20 46779779 46779936 -19888069 + MER63A DNA MER1_type 54 210 0 206 143 0 48 chr20 46779940 46779982 -19888023 - MIR SINE MIR -115 147 108 268 335 44 13 chr20 46780045 46780203 -19887802 - MIR SINE MIR 0 262 100 * 339 296 98 0 chr20 46780184 46780316 -19887689 + MIR SINE MIR 80 224 -38 506 237 47 7 chr20 46780762 46780929 -19887076 + MER5B DNA MER1_type 1 184 -5 389 264 40 24 chr20 46780945 46781070 -19886935 - MIR SINE MIR -115 147 21 232 308 70 43 chr20 46781242 46781384 -19886621 + MIR SINE MIR 44 191 -58 326 273 43 71 chr20 46781729 46781936 -19886069 + MIR SINE MIR 26 219 -43 216 240 0 0 chr20 46782974 46783024 -19884981 - L2 LINE L2 -1 3271 3222 * 236 227 100 73 chr20 46783007 46783117 -19884888 + L2 LINE L2 3154 3266 -6 282 279 36 18 chr20 46783578 46783689 -19884316 + MIR SINE MIR 100 212 -50 197 344 153 27 chr20 46783761 46783944 -19884061 + MIR SINE MIR 20 225 -37 758 251 27 5 chr20 46784102 46784289 -19883716 - MER117 DNA MER1_type -5 192 2 283 202 85 21 chr20 46784291 46784385 -19883620 + L2 LINE L2 3168 3267 -5 2780 232 76 11 chr20 46784804 46785581 -19882424 + L2 LINE L2 2155 3012 -301 734 168 89 39 chr20 46785581 46785760 -19882245 + MER5A DNA MER1_type 2 189 0 2780 232 76 11 chr20 46785760 46785940 -19882065 + L2 LINE L2 3012 3179 -134 338 254 0 82 chr20 46785955 46786089 -19881916 + L1MCa LINE L1 1942 2064 -4362 * 339 230 92 0 chr20 46786014 46786101 -19881904 - L1MC4 LINE L1 -1337 6705 6611 318 26 0 0 chr20 46786101 46786140 -19881865 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 213 39 0 0 chr20 46786144 46786170 -19881835 + (GA)n Simple_repeat Simple_repeat 2 27 0 1878 131 7 11 chr20 46786170 46786444 -19881561 - AluSx SINE Alu -39 273 1 26 0 0 0 chr20 46786444 46786470 -19881535 + AT_rich Low_complexity Low_complexity 1 26 0 398 176 0 0 chr20 46786535 46786603 -19881402 + L2 LINE L2 3245 3312 -1 325 272 0 0 chr20 46787203 46787284 -19880721 + MIR SINE MIR 66 146 -62 297 254 82 41 chr20 46787327 46787449 -19880556 + MIR SINE MIR 64 190 -72 324 211 184 9 chr20 46787770 46787879 -19880126 + MIR3 SINE MIR 77 204 -4 * 1609 253 113 31 chr20 46787854 46788438 -19879567 + L2 LINE L2 2202 2833 -481 588 187 93 33 chr20 46788554 46788704 -19879301 + L2 LINE L2 3155 3313 0 244 297 57 46 chr20 46790914 46791187 -19876818 + L2 LINE L2 2658 3061 -211 516 193 248 7 chr20 46791262 46791407 -19876598 - MER5A DNA MER1_type 0 189 10 226 286 54 54 chr20 46791551 46791663 -19876342 - MIR SINE MIR -20 242 131 415 301 32 21 chr20 46791801 46791987 -19876018 + MIR SINE MIR 36 223 -39 191 302 0 0 chr20 46792234 46792277 -19875728 + MIR SINE MIR 220 262 0 235 274 155 0 chr20 46792492 46792576 -19875429 + MIR3 SINE MIR 85 181 -27 371 265 65 0 chr20 46793262 46793395 -19874610 - MIR SINE MIR -54 208 65 292 318 62 23 chr20 46793399 46793528 -19874477 + MIR SINE MIR 59 192 -70 270 252 174 26 chr20 46793954 46794069 -19873936 - MIR SINE MIR -12 250 119 539 255 116 19 chr20 46794349 46794565 -19873440 + MIR SINE MIR 20 256 -6 207 309 92 70 chr20 46794694 46794966 -19873039 + L2 LINE L2 2991 3268 -4 232 245 245 0 chr20 46795023 46795117 -19872888 + L2 LINE L2 3197 3313 0 340 313 80 13 chr20 46795232 46795382 -19872623 - MIR SINE MIR -36 226 67 21 0 0 0 chr20 46795875 46795896 -19872109 + AT_rich Low_complexity Low_complexity 1 21 0 787 282 20 20 chr20 46796645 46796806 -19871199 - MIR SINE MIR -1 261 98 1793 126 91 13 chr20 46796806 46797124 -19870881 - MER2 DNA MER2_type -1 343 1 787 282 20 20 chr20 46797124 46797210 -19870795 - MIR SINE MIR -163 99 14 321 270 24 8 chr20 46797484 46797610 -19870395 + MIR SINE MIR 21 148 -60 1968 125 42 14 chr20 46797995 46798283 -19869722 + AluSx SINE Alu 4 299 -13 228 331 207 8 chr20 46798319 46798440 -19869565 + MIR SINE MIR 51 195 -67 570 318 19 28 chr20 46798486 46798697 -19869308 - MIR SINE MIR -48 214 6 278 224 158 0 chr20 46798784 46798860 -19869145 + MIR SINE MIR 33 120 -88 207 0 0 0 chr20 46798897 46798920 -19869085 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 256 299 0 13 chr20 46799304 46799381 -19868624 + L2 LINE L2 2970 3045 -227 216 0 0 0 chr20 46799656 46799680 -19868325 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 377 311 114 41 chr20 46799706 46800170 -19867835 - L2 LINE L2 -49 3223 2728 228 163 0 0 chr20 46800647 46800690 -19867315 + (CAG)n Simple_repeat Simple_repeat 1 43 0 22 56 0 0 chr20 46800975 46801011 -19866994 + GC_rich Low_complexity Low_complexity 1 36 0 233 286 92 31 chr20 46801229 46801327 -19866678 - L2 LINE L2 -23 3249 3146 948 280 56 43 chr20 46803633 46803724 -19864281 - L2 LINE L2 -1 3312 3224 2253 128 3 0 chr20 46803724 46804028 -19863977 + AluSq SINE Alu 1 305 -8 948 280 56 43 chr20 46804028 46804329 -19863676 - L2 LINE L2 -89 3224 2915 2080 121 35 0 chr20 46804473 46804763 -19863242 - AluSx SINE Alu -12 300 1 2130 236 121 61 chr20 46805579 46806170 -19861835 - L2 LINE L2 0 3313 2759 2078 140 0 19 chr20 46806170 46806477 -19861528 + AluJo SINE Alu 1 301 -11 1836 141 41 14 chr20 46806477 46806768 -19861237 + AluJb SINE Alu 1 299 -13 2130 236 121 61 chr20 46806768 46807448 -19860557 - L2 LINE L2 -553 2760 1949 561 278 51 0 chr20 46807510 46807686 -19860319 - L2 LINE L2 -1327 1987 1803 228 351 45 15 chr20 46808556 46808690 -19859315 - L2 LINE L2 -1 3271 3134 258 238 48 16 chr20 46808728 46808791 -19859214 - L2 LINE L2 0 3272 3208 186 254 36 18 chr20 46808880 46808935 -19859070 - MIR SINE MIR -6 256 201 334 255 72 33 chr20 46809059 46809212 -19858793 - L2 LINE L2 -181 3091 2933 578 308 147 32 chr20 46809361 46809803 -19858202 + MLT1L LTR MaLR 8 500 -115 623 282 36 52 chr20 46810478 46810726 -19857279 + MIR SINE MIR 19 262 0 203 250 0 0 chr20 46810805 46810849 -19857156 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 204 265 0 0 chr20 46811485 46811534 -19856471 + L2 LINE L2 3248 3296 -17 719 282 36 5 chr20 46812022 46812217 -19855788 - MIR SINE MIR -50 212 12 254 336 0 0 chr20 46812324 46812455 -19855550 + L2 LINE L2 2919 3049 -223 192 125 0 0 chr20 46812655 46812687 -19855318 + (TGGA)n Simple_repeat Simple_repeat 1 32 0 528 274 101 59 chr20 46812753 46812858 -19855147 - L2 LINE L2 0 3313 3214 351 65 0 0 chr20 46812858 46812904 -19855101 + (TG)n Simple_repeat Simple_repeat 1 46 0 528 274 101 59 chr20 46812904 46813104 -19854901 - L2 LINE L2 -99 3214 2995 597 310 108 11 chr20 46813166 46813547 -19854458 - L2 LINE L2 -452 2862 2445 550 202 42 0 chr20 46813557 46813676 -19854329 - MIR SINE MIR -5 257 134 228 213 0 0 chr20 46813836 46813883 -19854122 - MIR SINE MIR 0 262 216 520 208 130 7 chr20 46813931 46814085 -19853920 - MIR SINE MIR -52 210 38 355 179 47 0 chr20 46814267 46814373 -19853632 + (CA)n Simple_repeat Simple_repeat 1 111 0 206 222 22 0 chr20 46814736 46814781 -19853224 + CT-rich Low_complexity Low_complexity 2 47 0 640 171 109 43 chr20 46815029 46815239 -19852766 - L1ME3A LINE L1 -193 5977 5754 323 299 11 0 chr20 46815239 46815326 -19852679 + CT-rich Low_complexity Low_complexity 3 90 0 288 91 0 0 chr20 46815380 46815424 -19852581 + (CA)n Simple_repeat Simple_repeat 1 44 0 608 293 69 5 chr20 46816466 46816654 -19851351 - MIR SINE MIR -41 221 22 201 381 38 0 chr20 46816871 46816976 -19851029 - MIR SINE MIR -77 185 77 259 255 0 0 chr20 46817061 46817112 -19850893 + MIR3 SINE MIR 107 157 -51 241 287 128 0 chr20 46817100 46817194 -19850811 + MIR SINE MIR 35 140 -122 * 612 275 57 4 chr20 46817265 46817522 -19850483 - LTR16A LTR ERVL -1 456 172 288 285 139 28 chr20 46818221 46818365 -19849640 - MIR SINE MIR -65 197 38 193 236 36 0 chr20 46818420 46818475 -19849530 - L3 LINE CR1 -108 1469 1413 232 235 255 0 chr20 46818726 46818824 -19849181 - MIR3 SINE MIR -10 198 76 554 265 121 10 chr20 46818876 46819101 -19848904 - MIR SINE MIR -4 258 15 258 310 43 52 chr20 46819316 46819432 -19848573 + L2 LINE L2 3146 3260 -12 423 256 45 40 chr20 46819437 46819613 -19848392 - L2 LINE L2 -210 3062 2886 351 232 32 21 chr20 46820173 46820268 -19847737 - L2 LINE L2 -1025 2289 2194 492 261 100 37 chr20 46820290 46820504 -19847501 + MIR SINE MIR 34 262 0 402 294 14 35 chr20 46820548 46820691 -19847314 - MIR SINE MIR 0 262 123 1296 310 176 7 chr20 46820799 46821629 -19846376 + L2 LINE L2 1605 2574 -740 1413 273 105 0 chr20 46821643 46822178 -19845827 - L2 LINE L2 -842 2472 1882 299 276 35 11 chr20 46822183 46822270 -19845735 + L2 LINE L2 3134 3222 -50 325 297 51 93 chr20 46822508 46822862 -19845143 - L1MEd LINE L1 -5737 382 44 339 186 0 14 chr20 46822907 46822977 -19845028 + L2 LINE L2 3245 3313 0 190 300 0 0 chr20 46823893 46823943 -19844062 + L2 LINE L2 2630 2679 -635 2657 199 21 26 chr20 46823945 46824564 -19843441 + L1MB7 LINE L1 5559 6174 -10 1157 273 76 22 chr20 46824570 46825114 -19842891 + L2 LINE L2 2746 3313 0 303 342 132 32 chr20 46825123 46825494 -19842511 - L2 LINE L2 -8 3305 2898 409 315 72 20 chr20 46825666 46825917 -19842088 - L2 LINE L2 -495 2819 2556 391 259 7 56 chr20 46825953 46826096 -19841909 - MIR SINE MIR 0 262 127 286 336 10 19 chr20 46826295 46826399 -19841606 - L2 LINE L2 -996 2318 2216 904 132 0 66 chr20 46826458 46826610 -19841395 + FLAM_C SINE Alu 1 142 -1 235 295 133 46 chr20 46826998 46827455 -19840550 - L2 LINE L2 -1208 2106 1610 267 31 0 0 chr20 46827513 46827545 -19840460 + (GGA)n Simple_repeat Simple_repeat 3 34 0 1893 156 9 34 chr20 46828019 46828339 -19839666 - AluJb SINE Alu 0 312 1 207 389 45 28 chr20 46828440 46828672 -19839333 + MIR SINE MIR 20 261 -1 487 335 37 7 chr20 46828745 46829014 -19838991 + L1ME3 LINE L1 5653 5929 -233 27 29 0 0 chr20 46829221 46829255 -19838750 + AT_rich Low_complexity Low_complexity 1 34 0 465 306 28 11 chr20 46829374 46829554 -19838451 - MIR SINE MIR -60 202 20 2113 120 0 0 chr20 46829591 46829867 -19838138 + AluSx SINE Alu 3 278 -34 278 227 82 45 chr20 46830089 46830199 -19837806 + MIR3 SINE MIR 3 116 -92 247 281 51 102 chr20 46830549 46830745 -19837260 - L2 LINE L2 -532 2782 2597 288 269 216 30 chr20 46831313 46831480 -19836525 - MIR SINE MIR -18 244 47 184 304 76 11 chr20 46831580 46831672 -19836333 - L2 LINE L2 0 3272 3175 381 333 111 0 chr20 46832737 46832899 -19835106 + MIR SINE MIR 8 187 -75 363 213 47 16 chr20 46832975 46833083 -19834922 - MIR SINE MIR -61 147 38 233 119 24 0 chr20 46833268 46833310 -19834695 + (CA)n Simple_repeat Simple_repeat 1 43 0 217 289 0 0 chr20 46833903 46833955 -19834050 - L2 LINE L2 -11 3261 3210 1043 167 27 59 chr20 46834829 46835051 -19832954 + MER20 DNA MER1_type 1 215 -4 222 121 0 0 chr20 46835097 46835130 -19832875 - MIR SINE MIR -138 70 38 367 330 8 8 chr20 46835212 46835330 -19832675 - L2 LINE L2 -8 3264 3147 331 286 56 8 chr20 46835336 46835462 -19832543 + MIR SINE MIR 79 210 -52 253 314 51 17 chr20 46835588 46835706 -19832299 - MIR SINE MIR -51 211 90 322 289 149 0 chr20 46836443 46836564 -19831441 - L2 LINE L2 0 3272 3134 * 550 257 35 66 chr20 46836558 46836784 -19831221 + MIR SINE MIR 45 262 0 719 303 85 65 chr20 46836844 46837543 -19830462 - L2 LINE L2 -191 3081 2366 206 388 55 16 chr20 46837582 46837765 -19830240 + L2 LINE L2 2924 3113 -159 2653 242 102 33 chr20 46837783 46838948 -19829057 + L2 LINE L2 2065 3307 -6 375 278 135 8 chr20 46838977 46839110 -19828895 + L2 LINE L2 3123 3272 0 1564 116 5 0 chr20 46839716 46839932 -19828073 + MER20 DNA MER1_type 1 217 -2 205 115 58 58 chr20 46840128 46840180 -19827825 + GA-rich Low_complexity Low_complexity 6 57 0 2223 106 3 0 chr20 46840447 46840758 -19827247 + AluSx SINE Alu 1 312 0 666 244 63 19 chr20 46840776 46841014 -19826991 - MIR SINE MIR 0 262 17 317 301 57 24 chr20 46841019 46841142 -19826863 - MIR SINE MIR -59 203 77 1112 187 5 5 chr20 46841262 46841460 -19826545 - MER20 DNA MER1_type 0 219 22 217 300 14 0 chr20 46841534 46841604 -19826401 - MIR SINE MIR -74 134 64 499 297 18 6 chr20 46841840 46842005 -19826000 + MIR3 SINE MIR 39 205 -3 316 297 0 20 chr20 46842007 46842108 -19825897 + MIR SINE MIR 38 136 -72 528 336 118 19 chr20 46842132 46842368 -19825637 + L2 LINE L2 2871 3157 -115 366 23 0 0 chr20 46842368 46842411 -19825594 + (TG)n Simple_repeat Simple_repeat 2 44 0 528 336 118 19 chr20 46842411 46842540 -19825465 + L2 LINE L2 3157 3272 0 2208 82 3 3 chr20 46843186 46843478 -19824527 + AluSg SINE Alu 1 292 -18 214 251 6 0 chr20 46843489 46843546 -19824459 + MIR SINE MIR 101 160 -48 204 308 145 50 chr20 46843637 46843796 -19824209 + MIR3 SINE MIR 33 206 -2 216 235 161 25 chr20 46844290 46844371 -19823634 + L2 LINE L2 3160 3251 -21 871 229 36 27 chr20 46844874 46845097 -19822908 - MIR SINE MIR -10 252 28 1818 151 3 3 chr20 46845222 46845514 -19822491 - AluJo SINE Alu -20 292 1 393 252 41 21 chr20 46845754 46845908 -19822097 - MIR3 SINE MIR -53 155 36 383 289 58 32 chr20 46847578 46847768 -19820237 - L3b LINE CR1 -205 1378 1184 249 196 0 0 chr20 46847828 46847879 -19820126 + L2 LINE L2 3262 3312 -1 527 111 0 11 chr20 46848057 46848147 -19819858 + (TGGA)n Simple_repeat Simple_repeat 3 91 0 194 316 118 48 chr20 46848200 46848513 -19819492 + L2 LINE L2 2379 2713 -601 194 312 93 45 chr20 46848591 46848838 -19819167 + L2 LINE L2 2824 3082 -190 * 233 306 41 66 chr20 46848828 46848949 -19819056 - L2 LINE L2 -2 3270 3153 180 0 0 0 chr20 46849072 46849092 -19818913 + (TAA)n Simple_repeat Simple_repeat 2 21 0 695 201 211 15 chr20 46849111 46849315 -19818690 - MIR SINE MIR -2 260 17 372 272 76 35 chr20 46849450 46849621 -19818384 + MIR3 SINE MIR 26 202 -6 206 321 0 0 chr20 46849926 46849979 -19818026 + (CA)n Simple_repeat Simple_repeat 1 53 0 953 265 7 20 chr20 46850249 46850547 -19817458 + L1ME4a LINE L1 5650 5943 -178 222 37 0 0 chr20 46850658 46850685 -19817320 + (CA)n Simple_repeat Simple_repeat 2 28 0 600 266 179 5 chr20 46850692 46850910 -19817095 - MIR SINE MIR -6 256 1 195 42 0 0 chr20 46850956 46850980 -19817025 + (TA)n Simple_repeat Simple_repeat 2 25 0 2174 94 0 0 chr20 46850980 46851266 -19816739 + AluSq SINE Alu 1 286 -27 1212 180 5 31 chr20 46851675 46851897 -19816108 - MER20 DNA MER1_type -3 216 1 235 333 62 28 chr20 46852105 46852282 -19815723 + L2 LINE L2 2224 2406 -908 325 319 55 55 chr20 46852439 46852712 -19815293 + L2 LINE L2 2671 2943 -371 270 301 53 38 chr20 46852865 46852998 -19815007 + L2 LINE L2 3172 3306 -7 412 354 68 21 chr20 46853143 46853468 -19814537 - L2 LINE L2 -422 2892 2553 668 217 166 18 chr20 46853765 46853982 -19814023 - MIR SINE MIR -13 249 1 735 315 0 10 chr20 46854307 46854504 -19813501 - MER91A DNA MER1_type -1 195 1 248 269 13 39 chr20 46855586 46855664 -19812341 - L3b LINE CR1 -217 1366 1291 239 345 0 0 chr20 46855692 46855776 -19812229 + MIR3 SINE MIR 14 97 -111 1932 117 10 0 chr20 46956728 46957018 -19710987 + AluSx SINE Alu 4 296 -16 1014 196 9 23 chr20 46957673 46957887 -19710118 + MER20 DNA MER1_type 9 219 0 216 374 31 6 chr20 46958219 46958382 -19709623 - L2 LINE L2 -284 3029 2863 247 241 0 0 chr20 46958818 46958872 -19709133 - MER58A DNA MER1_type -3 221 168 313 295 21 0 chr20 46958898 46958993 -19709012 - MER58A DNA MER1_type -10 97 1 1733 182 42 20 chr20 46960061 46960462 -19707543 - L1MB5 LINE L1 0 6174 5765 757 190 161 6 chr20 46962386 46962560 -19705445 + MER3 DNA MER1_type 9 209 0 350 216 0 14 chr20 46962560 46962591 -19705414 - MER3 DNA MER1_type -162 47 18 186 222 0 0 chr20 46963401 46963437 -19704568 + MIR SINE MIR 37 72 -136 358 268 127 7 chr20 46964666 46964808 -19703197 - Charlie8 DNA MER1_type -2196 221 63 384 286 263 20 chr20 46965987 46966284 -19701721 - L2 LINE L2 -388 2926 2558 825 201 6 6 chr20 46966447 46966606 -19701399 + FRAM SINE Alu 3 161 -5 296 240 219 0 chr20 46966953 46967049 -19700956 - MIR SINE MIR -26 236 120 216 0 0 0 chr20 46970305 46970329 -19697676 + (A)n Simple_repeat Simple_repeat 1 24 0 31 0 0 0 chr20 46971030 46971061 -19696944 + AT_rich Low_complexity Low_complexity 1 31 0 35 24 0 0 chr20 46971422 46971464 -19696541 + AT_rich Low_complexity Low_complexity 1 42 0 309 51 0 0 chr20 46972329 46972368 -19695637 + (CA)n Simple_repeat Simple_repeat 2 40 0 198 0 0 0 chr20 46973826 46973848 -19694157 + (A)n Simple_repeat Simple_repeat 1 22 0 1985 100 7 17 chr20 46975251 46975552 -19692453 + AluY SINE Alu 1 298 -13 657 69 0 0 chr20 46976059 46976146 -19691859 + (CTG)n Simple_repeat Simple_repeat 3 89 0 1936 125 14 0 chr20 46976345 46976634 -19691371 - AluSx SINE Alu -19 293 1 1941 120 31 0 chr20 46976666 46976957 -19691048 + AluSq SINE Alu 1 300 -13 309 263 0 25 chr20 46978011 46978091 -19689914 - L2 LINE L2 -1 3271 3194 1519 162 73 0 chr20 46978468 46978740 -19689265 + AluJb SINE Alu 17 308 -4 1988 109 36 3 chr20 46979012 46979314 -19688691 + AluSx SINE Alu 1 312 0 318 237 0 53 chr20 46980227 46980303 -19687702 - L2 LINE L2 0 3313 3242 573 277 131 81 chr20 46980471 46980838 -19687167 + L2 LINE L2 2034 2444 -870 1803 175 11 29 chr20 46980838 46981186 -19686819 - MER2 DNA MER2_type 0 344 3 573 277 131 81 chr20 46981186 46981414 -19686591 + L2 LINE L2 2444 2659 -655 476 182 0 0 chr20 46981419 46981496 -19686509 - FRAM/FAM SINE Alu -102 74 1 249 244 61 49 chr20 46981520 46981602 -19686403 + HAL1 LINE L1 2 84 -2423 46 33 0 0 chr20 46982041 46982101 -19685904 + AT_rich Low_complexity Low_complexity 1 60 0 2272 84 0 0 chr20 46982221 46982520 -19685485 + AluSg SINE Alu 1 299 -11 461 260 79 8 chr20 46982566 46982693 -19685312 + HAL1 LINE L1 743 878 -1629 1153 267 95 24 chr20 46982724 46982768 -19685237 + HAL1 LINE L1 1159 1198 -1309 2365 49 0 33 chr20 46982768 46983072 -19684933 + AluY SINE Alu 1 294 -17 1153 267 95 24 chr20 46983072 46983618 -19684387 + HAL1 LINE L1 1198 1791 -716 2100 107 0 10 chr20 46984003 46984301 -19683704 + AluSx SINE Alu 1 295 -17 2235 72 16 0 chr20 46985422 46985726 -19682279 + AluY SINE Alu 1 309 -2 851 152 61 12 chr20 46985732 46985896 -19682109 + AluSg/x SINE Alu 134 305 -5 2162 79 0 26 chr20 46986314 46986618 -19681387 - AluY SINE Alu -15 296 1 1203 134 0 0 chr20 46988784 46988963 -19679042 - AluSg/x SINE Alu -7 305 127 23 0 0 0 chr20 46989230 46989253 -19678752 + AT_rich Low_complexity Low_complexity 1 23 0 28 0 0 0 chr20 46991958 46991986 -19676019 + AT_rich Low_complexity Low_complexity 1 28 0 1931 172 0 16 chr20 46991988 46992302 -19675703 + AluJo SINE Alu 1 309 -3 208 250 36 0 chr20 46992302 46992358 -19675647 + GA-rich Low_complexity Low_complexity 2 59 0 675 224 8 0 chr20 46993423 46993548 -19674457 + FLAM_A SINE Alu 2 127 -6 1519 231 105 96 chr20 46993933 46994236 -19673769 + MER21B LTR ERV1 17 316 -547 2207 107 0 0 chr20 46994236 46994527 -19673478 + AluSc SINE Alu 1 291 -18 2310 109 0 7 chr20 46994531 46994835 -19673170 + AluSg SINE Alu 1 302 -8 1519 231 105 96 chr20 46994835 46995306 -19672699 + MER21B LTR ERV1 318 803 -60 2456 82 0 0 chr20 46996455 46996759 -19671246 + AluY SINE Alu 1 304 -7 2327 87 3 10 chr20 46997586 46997885 -19670120 + AluSq SINE Alu 1 297 -16 225 279 73 50 chr20 46998187 46998303 -19669702 + MIR SINE MIR 21 146 -62 2235 126 0 0 chr20 46998505 46998807 -19669198 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr20 46998943 46998964 -19669041 + AT_rich Low_complexity Low_complexity 1 21 0 1281 179 125 34 chr20 47000241 47000592 -19667413 + MLT1B LTR MaLR 1 383 -7 1000 184 34 15 chr20 47001137 47001343 -19666662 + MER2 DNA MER2_type 1 210 -135 2218 122 0 0 chr20 47002144 47002455 -19665550 + AluSx SINE Alu 1 311 -1 3467 139 0 11 chr20 47002569 47003100 -19664905 + MER1A DNA MER1_type 1 525 -2 2122 129 0 3 chr20 47003409 47003711 -19664294 - AluSq SINE Alu -12 301 1 266 239 233 20 chr20 47003795 47003911 -19664094 + MIR SINE MIR 35 171 -66 1017 171 189 72 chr20 47004203 47004606 -19663399 + LTR7 LTR ERV1 1 450 0 2087 93 6 75 chr20 47005241 47005562 -19662443 + AluSq SINE Alu 2 300 -13 225 184 0 0 chr20 47005941 47005990 -19662015 + A-rich Low_complexity Low_complexity 1 49 0 844 234 55 81 chr20 47006257 47006762 -19661243 + L1MC4 LINE L1 7550 8041 -1 1106 232 19 19 chr20 47006830 47007093 -19660912 + AluJo SINE Alu 25 287 -25 21 36 0 0 chr20 47007094 47007122 -19660883 + AT_rich Low_complexity Low_complexity 1 28 0 2315 89 0 3 chr20 47007123 47007425 -19660580 + AluSg SINE Alu 1 301 -9 2184 135 0 0 chr20 47007551 47007854 -19660151 - AluJb SINE Alu -9 303 1 2214 121 7 3 chr20 47008563 47008868 -19659137 + AluSp SINE Alu 1 306 -7 2130 132 7 3 chr20 47008959 47009262 -19658743 - AluSx SINE Alu -8 304 1 2322 93 0 3 chr20 47009961 47010261 -19657744 + AluSx SINE Alu 1 299 -13 2290 89 7 0 chr20 47010724 47011016 -19656989 + AluSq SINE Alu 1 294 -19 21 36 0 0 chr20 47011057 47011085 -19656920 + GC_rich Low_complexity Low_complexity 1 28 0 1892 100 4 4 chr20 47011085 47011336 -19656669 - AluSq SINE Alu -57 256 6 297 268 177 32 chr20 47011994 47012170 -19655835 - MIR SINE MIR -32 230 36 2363 77 17 7 chr20 47013286 47013586 -19654419 - AluSg SINE Alu -7 303 1 1630 167 0 14 chr20 47015090 47015372 -19652633 + AluJo SINE Alu 1 278 -34 1945 122 0 0 chr20 47015400 47015694 -19652311 - AluSx SINE Alu 0 307 14 1776 178 18 0 chr20 47016697 47016978 -19651027 + AluJo SINE Alu 1 286 -26 30 45 0 0 chr20 47017371 47017415 -19650590 + AT_rich Low_complexity Low_complexity 1 44 0 1739 114 0 4 chr20 47017473 47017709 -19650296 - AluSg SINE Alu -15 295 61 216 273 55 55 chr20 47017964 47018074 -19649931 - L2 LINE L2 -49 3264 3155 1216 210 126 18 chr20 47018432 47018556 -19649449 - Charlie1a DNA MER1_type -1313 1448 1339 1972 144 0 7 chr20 47018556 47018861 -19649144 - AluJo SINE Alu -9 303 1 2225 113 3 22 chr20 47018868 47019187 -19648818 - AluSq SINE Alu 0 313 1 1216 210 126 18 chr20 47019187 47019507 -19648498 - Charlie1a DNA MER1_type -1427 1334 947 3051 90 66 32 chr20 47019508 47020041 -19647964 - MER34C LTR ERV1 0 585 35 * 3597 194 37 38 chr20 47020038 47020988 -19647017 - Charlie1a DNA MER1_type -505 950 2 769 206 27 0 chr20 47021073 47021219 -19646786 + AluJo SINE Alu 1 150 -162 185 150 0 25 chr20 47021219 47021259 -19646746 + (TAAG)n Simple_repeat Simple_repeat 1 39 0 23 68 0 0 chr20 47021753 47021797 -19646208 + AT_rich Low_complexity Low_complexity 1 44 0 2299 92 0 7 chr20 47022051 47022357 -19645648 + AluSc SINE Alu 1 304 -5 743 164 0 0 chr20 47022479 47022595 -19645410 + FLAM_C SINE Alu 1 116 -17 316 252 126 44 chr20 47022901 47023060 -19644945 + MIR SINE MIR 79 250 -12 4167 138 107 7 chr20 47023196 47023945 -19644060 + LTR1B LTR ERV1 1 824 -2 785 263 192 8 chr20 47025817 47026171 -19641834 + MSTB2 LTR MaLR 1 419 -38 1558 184 14 4 chr20 47026402 47026680 -19641325 + AluJb SINE Alu 2 282 -30 2283 98 0 7 chr20 47026741 47027046 -19640959 + AluY SINE Alu 1 303 -8 25 0 0 0 chr20 47027046 47027071 -19640934 + AT_rich Low_complexity Low_complexity 1 25 0 315 0 0 0 chr20 47027071 47027106 -19640899 + (CA)n Simple_repeat Simple_repeat 2 36 0 1789 175 48 92 chr20 47027651 47028030 -19639975 - L1MB8 LINE L1 0 6178 5829 1755 161 35 35 chr20 47028030 47028378 -19639627 - MER7A DNA MER2_type 0 346 1 1789 175 48 92 chr20 47028378 47028541 -19639464 - L1MB8 LINE L1 -349 5829 5660 2309 99 0 3 chr20 47028580 47028883 -19639122 + AluSx SINE Alu 1 302 -10 2451 69 0 7 chr20 47028947 47029252 -19638753 - AluY SINE Alu -7 304 2 1215 158 58 42 chr20 47029312 47029428 -19638577 + L1MCa LINE L1 932 1045 -5381 2217 92 0 26 chr20 47029428 47029734 -19638271 + AluSx SINE Alu 1 298 -14 1215 158 58 42 chr20 47029734 47029947 -19638058 + L1MCa LINE L1 1045 1266 -5160 709 249 58 29 chr20 47029944 47030185 -19637820 + L1ME1 LINE L1 5914 6161 -5 * 1696 148 10 34 chr20 47030337 47030635 -19637370 + AluJb SINE Alu 11 301 -11 272 313 75 0 chr20 47030743 47030903 -19637102 + L1ME LINE L1 5691 5862 -300 21 57 0 0 chr20 47031182 47031217 -19636788 + AT_rich Low_complexity Low_complexity 1 35 0 563 238 26 117 chr20 47031283 47031514 -19636491 - MIR SINE MIR -38 224 15 21 0 0 0 chr20 47031522 47031543 -19636462 + AT_rich Low_complexity Low_complexity 1 21 0 2116 108 10 7 chr20 47031817 47032113 -19635892 + AluSx SINE Alu 1 297 -15 2165 122 7 0 chr20 47032125 47032428 -19635577 + AluSq SINE Alu 1 305 -8 491 119 0 0 chr20 47032428 47032495 -19635510 - AluS SINE Alu -245 68 2 2445 92 0 6 chr20 47032522 47032836 -19635169 - AluSx SINE Alu 0 312 1 190 191 101 90 chr20 47032939 47033028 -19634977 - MIR3 SINE MIR -9 199 110 2487 49 10 7 chr20 47033574 47033882 -19634123 + AluY SINE Alu 1 309 -2 2144 104 7 3 chr20 47033984 47034273 -19633732 + AluSq SINE Alu 1 290 -23 254 315 14 14 chr20 47034595 47034668 -19633337 + MIR SINE MIR 50 122 -86 979 281 58 33 chr20 47034752 47034872 -19633133 + L1MCa LINE L1 1317 1432 -5175 2145 110 3 10 chr20 47034872 47035171 -19632834 + AluSq SINE Alu 1 297 -16 979 281 58 33 chr20 47035171 47035722 -19632283 + L1MCa LINE L1 1432 2005 -4602 1216 160 0 46 chr20 47036065 47036077 -19631928 - AluJb SINE Alu -3 309 298 2070 147 3 3 chr20 47036077 47036389 -19631616 - AluSx SINE Alu 0 312 1 1216 160 0 46 chr20 47036389 47036613 -19631392 - AluJb SINE Alu -14 298 84 854 200 19 0 chr20 47036738 47036893 -19631112 + FRAM SINE Alu 4 161 -5 670 194 0 47 chr20 47037110 47037239 -19630766 + AluJb SINE Alu 1 123 -189 29 47 0 0 chr20 47037240 47037283 -19630722 + AT_rich Low_complexity Low_complexity 1 43 0 511 204 72 40 chr20 47037322 47037474 -19630531 + MER31-int LTR ERV1 3874 4030 -906 1920 152 3 0 chr20 47037542 47037838 -19630167 + AluSx SINE Alu 1 297 -15 318 252 106 0 chr20 47037872 47037995 -19630010 + L1MC4a LINE L1 4803 4938 -1208 1980 134 0 33 chr20 47038018 47038325 -19629680 + AluSq SINE Alu 1 297 -16 1455 227 108 112 chr20 47038365 47038782 -19629223 + L1MC4a LINE L1 5814 6231 -1577 2080 122 20 0 chr20 47038782 47039085 -19628920 + AluSx SINE Alu 1 309 -3 1455 227 108 112 chr20 47039085 47039449 -19628556 + L1MC4a LINE L1 6231 6595 -1213 1013 224 140 26 chr20 47039449 47039757 -19628248 - MER2 DNA MER2_type -1 343 1 192 77 0 0 chr20 47039763 47039789 -19628216 + (TATATG)n Simple_repeat Simple_repeat 3 28 0 1455 227 108 112 chr20 47039789 47039938 -19628067 + L1MC4a LINE L1 6600 6748 -1060 * 2245 246 89 51 chr20 47039907 47040988 -19627017 + L1MC4 LINE L1 6934 7995 0 2180 99 27 0 chr20 47040998 47041290 -19626715 + AluSx SINE Alu 1 300 -12 2073 121 34 0 chr20 47041873 47042170 -19625835 + AluSx SINE Alu 1 307 -5 928 138 56 56 chr20 47042385 47042580 -19625425 + Tigger2a DNA MER2_type 8 202 -232 2299 117 0 0 chr20 47042581 47042879 -19625126 - AluSx SINE Alu -14 298 1 189 74 0 0 chr20 47042891 47042918 -19625087 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1419 194 11 11 chr20 47042922 47043190 -19624815 - AluJo SINE Alu -30 282 15 1617 206 7 7 chr20 47043233 47043543 -19624462 - AluJb SINE Alu -2 310 1 1454 159 13 0 chr20 47043543 47043776 -19624229 + Tigger2a DNA MER2_type 199 434 0 2039 128 3 0 chr20 47044123 47044411 -19623594 + AluSx SINE Alu 1 289 -23 865 151 0 22 chr20 47044550 47044689 -19623316 + AluJo SINE Alu 1 136 -176 1977 139 3 3 chr20 47044704 47044992 -19623013 + AluSq SINE Alu 1 288 -25 198 0 0 0 chr20 47044998 47045020 -19622985 + (TTAA)n Simple_repeat Simple_repeat 1 22 0 1113 134 94 5 chr20 47045889 47046090 -19621915 - Tigger4(Zombi) DNA MER2_type -2 2729 2511 1922 162 3 13 chr20 47046095 47046398 -19621607 - AluJb SINE Alu -12 300 1 2010 103 33 7 chr20 47046661 47046934 -19621071 - AluSx SINE Alu -32 280 1 1350 205 143 17 chr20 47047121 47047497 -19620508 + LTR45B LTR ERV1 72 619 0 615 227 36 0 chr20 47047947 47048057 -19619948 + FLAM_A SINE Alu 1 114 -19 2286 94 0 0 chr20 47048731 47049019 -19618986 + AluSx SINE Alu 1 288 -24 187 286 167 24 chr20 47049491 47049575 -19618430 - L2 LINE L2 -9 3263 3168 298 281 56 11 chr20 47049637 47049726 -19618279 - L2 LINE L2 -5 3267 3175 23 54 0 0 chr20 47052634 47052671 -19615334 + AT_rich Low_complexity Low_complexity 1 37 0 6501 112 199 153 chr20 47053577 47053787 -19614218 + Tigger1 DNA MER2_type 1 200 -2218 1912 125 21 28 chr20 47053787 47054100 -19613905 - AluSx SINE Alu 0 311 1 6501 112 199 153 chr20 47054100 47054380 -19613625 + Tigger1 DNA MER2_type 200 466 -1952 1933 151 7 0 chr20 47054380 47054672 -19613333 + AluSx SINE Alu 1 294 -18 6501 112 199 153 chr20 47054672 47054794 -19613211 + Tigger1 DNA MER2_type 466 581 -1837 724 159 0 24 chr20 47054794 47054920 -19613085 - FRAM SINE Alu -12 164 42 6501 112 199 153 chr20 47054920 47055189 -19612816 + Tigger1 DNA MER2_type 581 836 -1582 1802 149 3 48 chr20 47055189 47055505 -19612500 + AluJb SINE Alu 1 302 -10 6501 112 199 153 chr20 47055505 47055649 -19612356 + Tigger1 DNA MER2_type 836 972 -1446 1806 134 0 0 chr20 47055649 47055910 -19612095 + AluSx SINE Alu 51 311 -1 2198 126 0 0 chr20 47055912 47056206 -19611799 + AluSx SINE Alu 1 294 -18 6501 112 199 153 chr20 47056206 47056246 -19611759 + Tigger1 DNA MER2_type 972 1009 -1409 279 0 0 0 chr20 47056246 47056277 -19611728 + (TG)n Simple_repeat Simple_repeat 2 32 0 6501 112 199 153 chr20 47056277 47056770 -19611235 + Tigger1 DNA MER2_type 1009 1478 -940 1790 137 70 0 chr20 47056770 47057040 -19610965 - AluJb SINE Alu -23 289 1 6501 112 199 153 chr20 47057040 47057185 -19610820 + Tigger1 DNA MER2_type 1478 1615 -803 2479 73 0 0 chr20 47057185 47057488 -19610517 - AluY SINE Alu -8 303 1 6501 112 199 153 chr20 47057488 47057518 -19610487 + Tigger1 DNA MER2_type 1615 1955 -463 2008 116 11 14 chr20 47057534 47057819 -19610186 - AluSx SINE Alu -28 284 1 24 32 0 0 chr20 47057819 47057850 -19610155 + AT_rich Low_complexity Low_complexity 1 31 0 1506 145 0 4 chr20 47057870 47058097 -19609908 - AluJb SINE Alu -30 282 57 325 73 0 0 chr20 47058097 47058138 -19609867 - AluJ/FLAM SINE Alu -216 86 46 801 158 8 0 chr20 47058140 47058260 -19609745 + AluSg/x SINE Alu 174 294 -16 739 184 14 7 chr20 47058267 47058408 -19609597 + Tigger1 DNA MER2_type 2081 2222 -196 1030 171 0 18 chr20 47058408 47058578 -19609427 - AluSg/x SINE Alu -17 295 129 472 182 136 9 chr20 47058584 47058694 -19609311 - FLAM_C SINE Alu -9 124 1 895 130 49 12 chr20 47058695 47058857 -19609148 + Tigger1 DNA MER2_type 2217 2384 -34 1417 185 22 51 chr20 47059215 47059346 -19608659 + AluJo SINE Alu 3 136 -176 2275 106 0 3 chr20 47059346 47059648 -19608357 + AluSq SINE Alu 1 301 -12 1417 185 22 51 chr20 47059648 47059830 -19608175 + AluJo SINE Alu 136 307 -5 2290 93 0 0 chr20 47059873 47060153 -19607852 + AluSc SINE Alu 3 282 -27 459 0 0 0 chr20 47060153 47060204 -19607801 + (CATA)n Simple_repeat Simple_repeat 2 52 0 727 191 40 0 chr20 47060253 47060379 -19607626 - FLAM_A SINE Alu -2 131 1 1759 174 7 0 chr20 47060407 47060700 -19607305 + AluJb SINE Alu 1 295 -17 1457 102 205 8 chr20 47060994 47061238 -19606767 + AluSg1 SINE Alu 1 292 -17 204 265 101 53 chr20 47061401 47061481 -19606524 + MIR SINE MIR 28 103 -105 1689 185 0 23 chr20 47061481 47061784 -19606221 - AluJb SINE Alu -16 296 1 204 265 101 53 chr20 47061784 47061857 -19606148 + MIR SINE MIR 103 191 -17 2116 117 3 0 chr20 47061936 47062227 -19605778 + AluSq SINE Alu 1 292 -21 299 255 121 7 chr20 47062331 47062480 -19605525 + L1P5 LINE L1 5265 5430 -721 313 246 118 27 chr20 47062710 47062820 -19605185 + L2 LINE L2 3186 3305 -8 251 303 83 18 chr20 47062820 47063038 -19604967 + L1ME4a LINE L1 5753 5984 -137 1514 145 52 8 chr20 47063048 47063296 -19604709 - AluJb SINE Alu -10 302 44 2237 121 0 6 chr20 47063298 47063612 -19604393 - AluSx SINE Alu 0 312 1 313 208 0 0 chr20 47063614 47063667 -19604338 - AluJb SINE Alu -249 53 1 896 194 29 6 chr20 47063735 47063910 -19604095 - L1MC1 LINE L1 -13 6320 6142 767 177 0 31 chr20 47064171 47064301 -19603704 + FLAM_C SINE Alu 1 126 -17 5199 138 73 16 chr20 47064680 47065593 -19602412 + L1MC1 LINE L1 5354 6318 -15 1660 155 0 88 chr20 47065598 47065940 -19602065 + AluJo SINE Alu 1 312 0 1694 171 16 26 chr20 47065942 47066251 -19601754 + AluJb SINE Alu 1 306 -6 763 92 92 8 chr20 47066251 47066382 -19601623 + L1PB2 LINE L1 6010 6151 0 1981 169 76 8 chr20 47066393 47066839 -19601166 + L1MC/D LINE L1 5198 5677 -743 1983 132 17 0 chr20 47066840 47067127 -19600878 + AluSx SINE Alu 1 292 -20 745 203 0 15 chr20 47067131 47067264 -19600741 + AluJo/FLAM SINE Alu 1 131 -171 1314 164 5 5 chr20 47067266 47067480 -19600525 + AluSx SINE Alu 1 214 -98 882 132 0 0 chr20 47067483 47067612 -19600393 - FLAM_C SINE Alu -8 135 7 6676 104 29 45 chr20 47067615 47068671 -19599334 + Tigger2 DNA MER2_type 1163 2201 -517 1739 164 69 17 chr20 47068684 47068836 -19599169 + MLT1B LTR MaLR 15 158 -232 2072 91 6 76 chr20 47068836 47069165 -19598840 + AluSp SINE Alu 1 306 -7 1739 164 69 17 chr20 47069165 47069359 -19598646 + MLT1B LTR MaLR 158 379 -11 849 251 52 26 chr20 47069682 47069913 -19598092 + MIR SINE MIR 14 250 -12 298 309 44 49 chr20 47069965 47070169 -19597836 + L1ME LINE L1 5531 5733 -388 1489 143 0 5 chr20 47070476 47070700 -19597305 + AluSg/x SINE Alu 84 306 -6 1976 143 27 0 chr20 47070982 47071275 -19596730 + AluSx SINE Alu 1 301 -11 2503 65 0 13 chr20 47071275 47071584 -19596421 + AluY SINE Alu 1 305 -6 237 331 105 23 chr20 47071770 47071903 -19596102 - MIR3 SINE MIR -62 146 3 5589 25 1 0 chr20 47072093 47072742 -19595263 - L1P LINE L1 -1240 4906 4257 8123 23 1 8 chr20 47072742 47073825 -19594180 + L1PA4 LINE L1 5078 6155 0 1901 158 0 16 chr20 47073982 47074286 -19593719 + AluJb SINE Alu 1 299 -13 1183 205 221 27 chr20 47075895 47076697 -19591308 - Charlie2 DNA MER1_type -12 2850 1862 2412 87 3 0 chr20 47076752 47077052 -19590953 - AluSp SINE Alu -10 303 3 21 0 0 0 chr20 47077063 47077084 -19590921 + AT_rich Low_complexity Low_complexity 1 21 0 1850 164 3 13 chr20 47077218 47077522 -19590483 + AluJb SINE Alu 7 307 -5 262 135 0 58 chr20 47077583 47077635 -19590370 + L1MC5 LINE L1 7321 7369 -592 1574 158 0 114 chr20 47077636 47077977 -19590028 - AluJo SINE Alu 0 302 1 823 151 8 8 chr20 47078047 47078173 -19589832 + AluJb SINE Alu 8 133 -179 2339 103 0 3 chr20 47078644 47078956 -19589049 - AluSq SINE Alu -2 311 1 1935 127 42 0 chr20 47079186 47079306 -19588699 + AluSx SINE Alu 1 114 -198 203 0 0 36 chr20 47079306 47079334 -19588671 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 1935 127 42 0 chr20 47079334 47079497 -19588508 + AluSx SINE Alu 114 296 -16 2289 70 0 21 chr20 47079499 47079826 -19588179 + AluY SINE Alu 1 321 0 1196 296 185 20 chr20 47079978 47080386 -19587619 - L2 LINE L2 -1 3312 2973 2197 116 3 0 chr20 47080386 47080689 -19587316 + AluSp SINE Alu 1 304 -9 1196 296 185 20 chr20 47080689 47081181 -19586824 - L2 LINE L2 -340 2973 2255 2034 138 0 0 chr20 47081202 47081484 -19586521 + AluJb SINE Alu 1 282 -30 2256 123 0 0 chr20 47081740 47082042 -19585963 + AluSx SINE Alu 1 302 -10 470 265 91 23 chr20 47082095 47082314 -19585691 + HAL1b LINE L1 397 630 -718 803 202 89 0 chr20 47082732 47082900 -19585105 + AluJb SINE Alu 127 309 -3 874 193 106 5 chr20 47083026 47083244 -19584761 + L1MD3 LINE L1 7751 7990 -5 444 240 80 27 chr20 47083257 47083407 -19584598 + L1MC5 LINE L1 6960 7117 -844 2125 123 7 0 chr20 47083407 47083717 -19584288 + AluSx SINE Alu 1 312 0 1010 223 249 35 chr20 47083824 47084218 -19583787 + MLT1F LTR MaLR 1 478 -64 1765 159 10 13 chr20 47084236 47084537 -19583468 - AluJb SINE Alu -12 300 1 550 206 0 0 chr20 47084568 47084660 -19583345 - FAM SINE Alu -67 118 27 298 200 62 0 chr20 47084661 47084726 -19583279 + MLT1F LTR MaLR 497 565 -2 991 221 109 52 chr20 47084728 47084877 -19583128 + L1MC5 LINE L1 7293 7432 -529 1676 164 3 58 chr20 47084877 47085207 -19582798 + AluJo SINE Alu 1 312 0 991 221 109 52 chr20 47085207 47085514 -19582491 + L1MC5 LINE L1 7432 7775 -186 922 146 0 127 chr20 47085531 47085751 -19582254 + AluJo SINE Alu 21 212 -100 825 78 63 0 chr20 47085754 47085896 -19582109 + G-rich Low_complexity Low_complexity 4 154 0 191 304 104 56 chr20 47086500 47086625 -19581380 + L2 LINE L2 3169 3299 -14 2104 112 7 3 chr20 47086627 47086921 -19581084 - AluSq SINE Alu -14 299 5 270 277 69 0 chr20 47087159 47087260 -19580745 + MIR SINE MIR 101 208 -54 275 296 0 28 chr20 47087284 47087392 -19580613 + MER104 DNA Tc2 29 133 -47 663 106 0 0 chr20 47087393 47087478 -19580527 + AluS SINE Alu 2 86 -227 314 217 0 0 chr20 47087478 47087538 -19580467 + HsTC2 DNA Tc2 1832 1891 -7 528 254 34 0 chr20 47087731 47087849 -19580156 - L2 LINE L2 -4 3309 3188 705 163 16 142 chr20 47087855 47088045 -19579960 - FRAM SINE Alu -10 166 1 2039 108 30 27 chr20 47088373 47088670 -19579335 + AluSg SINE Alu 1 298 -12 2162 122 3 0 chr20 47089039 47089334 -19578671 + AluSq SINE Alu 3 298 -15 2135 110 0 13 chr20 47089335 47089634 -19578371 + AluY SINE Alu 1 295 -16 2317 74 6 22 chr20 47090108 47090419 -19577586 + AluSg SINE Alu 1 306 -4 697 170 7 37 chr20 47090425 47090560 -19577445 + FLAM_C SINE Alu 1 131 -2 539 206 151 27 chr20 47090823 47090969 -19577036 + AluJo SINE Alu 2 165 -147 3490 172 38 57 chr20 47090983 47091411 -19576594 + LTR1 LTR ERV1 7 417 -368 2215 107 0 0 chr20 47091411 47091710 -19576295 + AluSc SINE Alu 1 299 -10 3490 172 38 57 chr20 47091710 47092020 -19575985 + LTR1 LTR ERV1 417 731 -54 711 154 8 62 chr20 47092020 47092150 -19575855 + AluJo SINE Alu 165 287 -25 21 36 0 0 chr20 47092169 47092197 -19575808 + AT_rich Low_complexity Low_complexity 1 28 0 1509 191 3 3 chr20 47092302 47092584 -19575421 - AluSx SINE Alu -30 282 1 22 35 0 0 chr20 47092924 47092953 -19575052 + AT_rich Low_complexity Low_complexity 1 29 0 926 191 60 119 chr20 47093035 47093262 -19574743 + L2 LINE L2 2428 2630 -684 1735 172 13 3 chr20 47093262 47093570 -19574435 - AluJo SINE Alu -1 311 1 926 191 60 119 chr20 47093570 47093677 -19574328 + L2 LINE L2 2630 2742 -572 407 186 131 55 chr20 47093719 47093864 -19574141 + L1ME4a LINE L1 5966 6121 0 1149 123 0 12 chr20 47093912 47094083 -19573922 - AluSg/x SINE Alu -10 302 134 2340 83 3 6 chr20 47094083 47094395 -19573610 - AluSx SINE Alu -1 311 1 815 242 146 27 chr20 47094445 47094705 -19573300 + AluJo SINE Alu 2 292 -10 528 277 82 78 chr20 47094764 47095077 -19572928 + L2 LINE L2 2772 3151 -121 261 0 0 0 chr20 47095077 47095106 -19572899 + (CA)n Simple_repeat Simple_repeat 2 30 0 528 277 82 78 chr20 47095106 47095228 -19572777 + L2 LINE L2 3151 3271 -1 252 0 0 0 chr20 47095849 47095877 -19572128 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1908 114 0 18 chr20 47095881 47096161 -19571844 - AluSx SINE Alu -37 275 1 2094 116 0 7 chr20 47096452 47096755 -19571250 + AluSx SINE Alu 1 301 -11 1828 135 21 0 chr20 47097506 47097788 -19570217 + AluSx SINE Alu 1 288 -24 1962 107 52 0 chr20 47097799 47098088 -19569917 + AluSq SINE Alu 2 305 -8 24 0 0 0 chr20 47098088 47098112 -19569893 + AT_rich Low_complexity Low_complexity 1 24 0 2109 95 27 3 chr20 47098150 47098446 -19569559 + AluSp SINE Alu 1 303 -10 261 221 29 0 chr20 47099142 47099210 -19568795 + L1ME1 LINE L1 5208 5277 -869 1714 187 80 89 chr20 47099313 47099932 -19568073 + L1ME1 LINE L1 5318 5968 -198 899 241 88 42 chr20 47099957 47100274 -19567731 + L1M4 LINE L1 4063 4401 -1745 1671 102 42 121 chr20 47100274 47100408 -19567597 + AluSx SINE Alu 1 144 -168 8817 20 3 264 chr20 47100408 47102284 -19565721 + SVA Other Other 2 1386 0 1671 102 42 121 chr20 47102284 47102462 -19565543 + AluSx SINE Alu 144 288 -24 899 241 88 42 chr20 47102462 47102521 -19565484 + L1M4 LINE L1 4401 4456 -1690 1216 137 5 61 chr20 47102523 47102735 -19565270 + LTR9B LTR ERV1 445 644 0 467 165 41 52 chr20 47102735 47102832 -19565173 + HERV17 LTR ERV1 1 96 -7322 853 152 48 7 chr20 47102835 47102980 -19565025 + HERV17 LTR ERV1 409 559 -6859 1612 159 19 2 chr20 47102985 47103290 -19564715 + HERV17 LTR ERV1 746 1135 -7784 4641 138 20 19 chr20 47103292 47103982 -19564023 + HUERS-P3b LTR ERV1 6726 7416 -2 3198 114 41 33 chr20 47103984 47104015 -19563990 + LTR9B LTR ERV1 42 71 -573 2227 61 14 0 chr20 47104015 47104308 -19563697 - AluY SINE Alu -14 297 1 3198 114 41 33 chr20 47104308 47104792 -19563213 + LTR9B LTR ERV1 71 561 -83 2246 65 7 13 chr20 47104811 47105117 -19562888 + AluY SINE Alu 1 304 -7 1217 210 31 7 chr20 47105117 47105408 -19562597 + L1M4 LINE L1 4444 4741 -1405 2059 156 171 26 chr20 47105445 47105913 -19562092 + LTR10A LTR ERV1 13 548 -61 1212 235 76 103 chr20 47105920 47106685 -19561320 + LTR10A-int LTR ERV1 3 695 -5954 287 187 121 77 chr20 47106720 47106811 -19561194 + LTR10A-int LTR ERV1 975 1069 -5580 * 1652 118 53 40 chr20 47106806 47107127 -19560878 + HERV17 LTR ERV1 703 1027 -7599 771 186 0 14 chr20 47107137 47107155 -19560850 - FLAM_C SINE Alu -169 143 126 1966 110 10 7 chr20 47107155 47107445 -19560560 + AluSg SINE Alu 1 291 -19 771 186 0 14 chr20 47107445 47107571 -19560434 - FLAM_C SINE Alu -186 126 1 1973 131 10 0 chr20 47107773 47108064 -19559941 - AluSx SINE Alu -18 294 1 2194 102 0 0 chr20 47108064 47108358 -19559647 - AluSx SINE Alu -12 300 6 2202 92 3 19 chr20 47108492 47108809 -19559196 + AluSq SINE Alu 1 312 -1 1745 167 3 22 chr20 47108834 47109152 -19558853 - AluJo SINE Alu 0 312 1 2357 90 0 0 chr20 47109466 47109778 -19558227 + AluSx SINE Alu 1 312 0 1838 131 25 0 chr20 47110001 47110275 -19557730 - AluSx SINE Alu -30 282 2 1809 137 23 20 chr20 47110278 47110578 -19557427 - AluSx SINE Alu -11 301 1 2876 161 46 13 chr20 47110856 47111396 -19556609 - L1MC1 LINE L1 0 6333 5776 1709 145 29 23 chr20 47111437 47111747 -19556258 + AluSx SINE Alu 1 312 0 1773 116 35 25 chr20 47111761 47112046 -19555959 + AluSg SINE Alu 4 291 -19 23 0 0 0 chr20 47112046 47112069 -19555936 + AT_rich Low_complexity Low_complexity 1 23 0 1646 136 111 7 chr20 47112232 47112511 -19555494 + AluSg1 SINE Alu 1 308 -1 1603 142 21 21 chr20 47112540 47112821 -19555184 + AluSx SINE Alu 18 298 -14 33 43 0 0 chr20 47112989 47113036 -19554969 + AT_rich Low_complexity Low_complexity 1 47 0 322 245 117 0 chr20 47113293 47113387 -19554618 - L1ME3A LINE L1 -5 6165 6061 1962 141 13 0 chr20 47113469 47113773 -19554232 - AluSx SINE Alu -4 308 1 1457 228 32 76 chr20 47113806 47114022 -19553983 - L1MC1 LINE L1 -367 5799 5575 1843 135 3 38 chr20 47114022 47114341 -19553664 - AluSx SINE Alu -4 308 1 1457 228 32 76 chr20 47114341 47114620 -19553385 - L1MC1 LINE L1 -591 5575 5329 2101 114 3 0 chr20 47114620 47114928 -19553077 - AluSc SINE Alu 0 309 1 1457 228 32 76 chr20 47114928 47114996 -19553009 - L1MC1 LINE L1 -837 5329 5260 24 53 0 0 chr20 47115014 47115052 -19552953 + AT_rich Low_complexity Low_complexity 1 38 0 529 252 16 8 chr20 47115056 47115183 -19552822 - FLAM_A SINE Alu -5 128 1 1030 181 88 0 chr20 47115189 47115404 -19552601 - L1PB4 LINE L1 0 6156 5923 1557 117 12 16 chr20 47115413 47115660 -19552345 + AluSg SINE Alu 49 294 -16 288 0 0 0 chr20 47115660 47115692 -19552313 + (TA)n Simple_repeat Simple_repeat 2 33 0 1056 174 17 26 chr20 47115752 47115982 -19552023 + AluJo SINE Alu 85 312 0 1362 183 44 0 chr20 47116336 47116609 -19551396 + AluJo SINE Alu 3 287 -25 2155 101 0 7 chr20 47116769 47117066 -19550939 - AluSg SINE Alu -15 295 1 788 158 0 24 chr20 47117463 47117590 -19550415 - FLAM_C SINE Alu -18 125 2 1591 160 36 18 chr20 47117819 47118100 -19549905 - AluJb SINE Alu -26 286 1 195 290 170 10 chr20 47118240 47118340 -19549665 - MIR3 SINE MIR -3 205 90 245 132 0 0 chr20 47118964 47119002 -19549003 - MER113 DNA MER1_type? -481 40 3 2066 105 3 3 chr20 47119298 47119606 -19548399 + AluSp SINE Alu 1 308 0 21 0 0 0 chr20 47119635 47119656 -19548349 + AT_rich Low_complexity Low_complexity 1 21 0 2243 93 0 10 chr20 47121112 47121424 -19546581 + AluSx SINE Alu 1 309 -3 2219 102 7 0 chr20 47121862 47122167 -19545838 + AluSx SINE Alu 6 312 0 234 0 0 0 chr20 47122187 47122213 -19545792 + (A)n Simple_repeat Simple_repeat 1 26 0 22 35 0 0 chr20 47122298 47122327 -19545678 + AT_rich Low_complexity Low_complexity 1 29 0 2112 92 0 7 chr20 47122399 47122694 -19545311 - AluSg SINE Alu -16 294 2 225 0 0 0 chr20 47122713 47122738 -19545267 + (A)n Simple_repeat Simple_repeat 1 25 0 21 36 0 0 chr20 47122997 47123025 -19544980 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 47124987 47125010 -19542995 + GC_rich Low_complexity Low_complexity 1 23 0 218 192 0 19 chr20 47125253 47125305 -19542700 + (CCG)n Simple_repeat Simple_repeat 1 51 0 383 184 215 16 chr20 47125582 47125707 -19542298 - MIR SINE MIR 0 262 104 1096 267 30 28 chr20 47125723 47126086 -19541919 + L1MC4a LINE L1 7138 7501 -307 326 259 133 7 chr20 47126088 47126223 -19541782 + L1MC4 LINE L1 7632 7783 -259 1019 281 134 20 chr20 47126225 47126813 -19541192 + L2 LINE L2 2530 3178 -135 2197 97 7 0 chr20 47126827 47127136 -19540869 + AluSp SINE Alu 1 311 -2 2286 69 0 3 chr20 47127154 47127445 -19540560 + AluSq SINE Alu 1 290 -23 1591 159 22 4 chr20 47127468 47127744 -19540261 + AluJo SINE Alu 5 285 -27 38 0 0 0 chr20 47127744 47127782 -19540223 + AT_rich Low_complexity Low_complexity 1 38 0 477 281 0 91 chr20 47127832 47127971 -19540034 + L2 LINE L2 2600 2718 -596 1915 134 3 0 chr20 47127971 47128283 -19539722 + AluSq SINE Alu 1 313 0 477 281 0 91 chr20 47128283 47128341 -19539664 + L2 LINE L2 2718 2780 -534 900 169 0 0 chr20 47128344 47128492 -19539513 + AluJb SINE Alu 135 282 -30 651 281 111 0 chr20 47128524 47128741 -19539264 + L2 LINE L2 2809 3049 -264 1533 75 0 28 chr20 47128828 47129041 -19538964 - AluSp SINE Alu -12 301 95 320 163 20 0 chr20 47129042 47129091 -19538914 - FRAM SINE Alu -52 114 65 1870 142 0 3 chr20 47129097 47129386 -19538619 - AluSx SINE Alu -23 289 2 966 248 68 63 chr20 47129544 47129676 -19538329 + MLT1G1 LTR MaLR 77 207 -383 2082 88 0 0 chr20 47129676 47129984 -19538021 + AluSx SINE Alu 11 318 0 966 248 68 63 chr20 47129984 47130178 -19537827 + MLT1G1 LTR MaLR 207 398 -192 33 18 0 36 chr20 47130248 47130269 -19537736 + AT_rich Low_complexity Low_complexity 1 21 -32 2338 88 3 0 chr20 47130269 47130575 -19537430 + AluSx SINE Alu 1 307 -5 33 18 0 36 chr20 47130575 47130608 -19537397 + AT_rich Low_complexity Low_complexity 21 53 0 359 302 79 0 chr20 47130612 47130738 -19537267 + MLT1G1 LTR MaLR 420 555 0 232 283 83 25 chr20 47130857 47130977 -19537028 - L3 LINE CR1 -8 1569 1443 228 213 0 21 chr20 47130994 47131041 -19536964 - LTR67 LTR ERVL 0 557 512 298 211 22 44 chr20 47131118 47131208 -19536797 + A-rich Low_complexity Low_complexity 3 90 0 2041 128 20 0 chr20 47131230 47131536 -19536469 - AluSq SINE Alu -1 312 1 362 266 8 48 chr20 47131717 47131841 -19536164 + L1MC4 LINE L1 7865 7983 -59 2068 116 0 3 chr20 47131852 47132153 -19535852 - AluSg SINE Alu -10 300 1 1842 122 61 0 chr20 47132153 47132432 -19535573 - AluSg SINE Alu -14 296 1 797 155 0 0 chr20 47132434 47132563 -19535442 - AluJb SINE Alu -6 306 178 423 76 15 15 chr20 47132649 47132715 -19535290 + AluJb SINE Alu 71 136 -176 1366 156 4 16 chr20 47132716 47132959 -19535046 + AluJb SINE Alu 1 240 -72 572 174 10 0 chr20 47132993 47133091 -19534914 + AluJb SINE Alu 121 219 -93 517 252 48 91 chr20 47133169 47133379 -19534626 + MIR SINE MIR 61 261 -1 682 140 0 10 chr20 47134132 47134232 -19533773 + U6 snRNA snRNA 2 100 -7 2168 97 0 3 chr20 47134241 47134562 -19533443 - AluSq SINE Alu 0 313 1 216 0 0 0 chr20 47134568 47134592 -19533413 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1013 232 5 6 chr20 47134594 47134837 -19533168 + L1M4 LINE L1 5491 5722 -444 1955 139 13 0 chr20 47135023 47135324 -19532681 - AluSq SINE Alu -8 305 1 596 135 0 0 chr20 47135515 47135611 -19532394 - L1MA1 LINE L1 -9 6293 6198 1983 96 0 125 chr20 47135694 47136037 -19531968 + AluSq SINE Alu 1 300 -3 2369 81 3 0 chr20 47136382 47136691 -19531314 - AluSp SINE Alu -3 310 1 1761 134 72 7 chr20 47136693 47136984 -19531021 - AluSx SINE Alu 0 312 3 181 180 40 0 chr20 47136992 47137042 -19530963 + CT-rich Low_complexity Low_complexity 1 52 0 2420 84 0 0 chr20 47137042 47137353 -19530652 - AluSx SINE Alu -1 311 1 1545 142 51 44 chr20 47137357 47137652 -19530353 - AluJo SINE Alu -15 297 1 180 0 0 0 chr20 47137779 47137799 -19530206 + (CA)n Simple_repeat Simple_repeat 2 21 0 2206 99 0 3 chr20 47137812 47138114 -19529891 - AluSx SINE Alu -11 301 1 668 104 0 0 chr20 47138203 47138299 -19529706 + L1MA1 LINE L1 6198 6293 -9 2324 82 0 16 chr20 47138475 47138793 -19529212 + AluSq SINE Alu 1 313 0 2269 69 7 0 chr20 47138974 47139265 -19528740 + AluSp SINE Alu 2 294 -19 748 269 35 41 chr20 47139745 47140035 -19527970 + L1MEd LINE L1 7 294 -5825 2032 75 4 7 chr20 47140256 47140527 -19527478 + AluY SINE Alu 13 305 -6 190 74 0 0 chr20 47140527 47140554 -19527451 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 2169 84 3 7 chr20 47140570 47140866 -19527139 + AluSx SINE Alu 1 295 -17 970 170 0 28 chr20 47140880 47141062 -19526943 - AluJo SINE Alu 0 312 136 233 248 29 29 chr20 47141173 47141246 -19526759 + MIR3 SINE MIR 88 161 -47 835 129 0 43 chr20 47141324 47141463 -19526542 - AluJo SINE Alu -169 133 1 2243 96 3 6 chr20 47141474 47141857 -19526148 - AluSq SINE Alu 0 382 1 1109 213 94 67 chr20 47141859 47141927 -19526078 - MER113 DNA MER1_type? -104 417 352 1720 163 0 10 chr20 47141927 47142233 -19525772 - AluJo SINE Alu -9 303 1 1109 213 94 67 chr20 47142233 47142568 -19525437 - MER113 DNA MER1_type? -169 352 3 222 266 0 85 chr20 47142570 47142708 -19525297 - MIR3 SINE MIR -48 160 33 686 120 30 0 chr20 47142836 47142936 -19525069 + U6 snRNA snRNA 2 104 -3 995 121 0 0 chr20 47142965 47143105 -19524900 + AluJb SINE Alu 3 142 -170 2166 95 0 7 chr20 47143106 47143401 -19524604 + AluSx SINE Alu 1 293 -19 1273 176 3 96 chr20 47143403 47143561 -19524444 + AluJb SINE Alu 1 113 -199 432 55 0 0 chr20 47143561 47143616 -19524389 + (TA)n Simple_repeat Simple_repeat 2 56 0 1273 176 3 96 chr20 47143616 47143792 -19524213 + AluJb SINE Alu 113 304 -8 431 263 31 72 chr20 47143800 47143994 -19524011 - L2 LINE L2 -15 3298 3113 1629 177 10 16 chr20 47144278 47144404 -19523601 + AluSx SINE Alu 1 126 -186 2174 109 3 6 chr20 47144404 47144717 -19523288 + AluSx SINE Alu 1 312 0 1629 177 10 16 chr20 47144717 47144895 -19523110 + AluSx SINE Alu 126 303 -9 729 329 93 12 chr20 47145063 47145483 -19522522 - L2 LINE L2 -397 2917 2464 1140 145 5 15 chr20 47145563 47145763 -19522242 - AluJb SINE Alu -10 302 105 1601 166 12 38 chr20 47145764 47146084 -19521921 + AluJo SINE Alu 1 312 0 981 129 11 7 chr20 47146087 47146358 -19521647 + GA-rich Low_complexity Low_complexity 3 449 0 243 0 0 0 chr20 47146376 47146403 -19521602 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 596 171 76 0 chr20 47146407 47146512 -19521493 - AluJb SINE Alu -198 114 2 1694 169 7 16 chr20 47146555 47146862 -19521143 - AluJo SINE Alu -8 304 1 201 74 0 0 chr20 47146904 47146931 -19521074 + (ATTAG)n Simple_repeat Simple_repeat 5 31 0 2005 93 24 7 chr20 47146947 47147236 -19520769 + AluSc SINE Alu 6 299 -10 214 298 43 11 chr20 47147648 47147742 -19520263 + MIR3 SINE MIR 15 111 -97 1512 179 0 42 chr20 47147869 47148181 -19519824 - AluJo SINE Alu -13 299 1 2257 103 3 0 chr20 47148249 47148560 -19519445 - AluSx SINE Alu 0 312 1 766 185 0 0 chr20 47148563 47148693 -19519312 - AluJo/FLAM SINE Alu -170 132 3 216 128 43 0 chr20 47149000 47149036 -19518969 + (TAAA)n Simple_repeat Simple_repeat 1 41 -8 2038 100 3 3 chr20 47149036 47149326 -19518679 - AluSq SINE Alu -23 290 1 216 128 43 0 chr20 47149326 47149336 -19518669 + (TAAA)n Simple_repeat Simple_repeat 41 49 0 446 192 0 50 chr20 47149371 47149470 -19518535 + L1MC4 LINE L1 7434 7527 -515 1577 194 65 48 chr20 47149470 47149574 -19518431 - MER4E LTR ERV1 0 779 678 1645 148 0 64 chr20 47149574 47149735 -19518270 - AluSx SINE Alu -34 278 143 2134 126 0 0 chr20 47149735 47150045 -19517960 - AluSx SINE Alu -2 310 1 1645 148 0 64 chr20 47150045 47150180 -19517825 - AluSx SINE Alu -169 143 1 1577 194 65 48 chr20 47150180 47150487 -19517518 - MER4E LTR ERV1 -101 678 361 785 161 0 0 chr20 47150495 47150613 -19517392 + FLAM_C SINE Alu 4 121 -22 837 175 19 13 chr20 47150622 47150776 -19517229 - MER4E LTR ERV1 -407 372 218 338 130 0 0 chr20 47150861 47150915 -19517090 - Alu SINE Alu 0 301 248 522 136 0 0 chr20 47150916 47150997 -19517008 + MER41A LTR ERV1 361 441 -113 1893 141 3 10 chr20 47150997 47151296 -19516709 - AluSx SINE Alu -4 308 12 846 196 40 0 chr20 47151337 47151485 -19516520 + FRAM SINE Alu 1 152 -24 1764 115 4 36 chr20 47151585 47151731 -19516274 - AluSx SINE Alu -33 279 145 1985 142 0 0 chr20 47151731 47152027 -19515978 - AluSx SINE Alu -13 299 4 1764 115 4 36 chr20 47152027 47152158 -19515847 - AluSx SINE Alu -167 145 11 447 134 0 24 chr20 47152181 47152263 -19515742 - L1MD1 LINE L1 -239 6003 5924 1686 91 5 0 chr20 47152263 47152483 -19515522 + AluSx SINE Alu 1 221 -91 354 243 0 0 chr20 47152483 47152553 -19515452 - MER81 DNA DNA -44 70 1 2437 74 0 0 chr20 47152612 47152922 -19515083 + AluY SINE Alu 1 310 -1 2164 103 7 0 chr20 47153084 47153386 -19514619 + AluSq SINE Alu 1 304 -9 2301 99 0 0 chr20 47153647 47153951 -19514054 - AluSq SINE Alu -9 304 1 675 243 141 0 chr20 47154000 47154177 -19513828 + MIR SINE MIR 15 216 -46 891 167 95 0 chr20 47154178 47154346 -19513659 - MER58A DNA MER1_type -1 223 40 1573 176 52 127 chr20 47154346 47154591 -19513414 + L1MD2 LINE L1 5721 5912 -447 1965 100 33 0 chr20 47154591 47154861 -19513144 - AluSx SINE Alu -33 279 1 1573 176 52 127 chr20 47154861 47155110 -19512895 + L1MD2 LINE L1 5912 6178 -181 838 126 0 0 chr20 47155110 47155229 -19512776 + AluSq/x SINE Alu 1 119 -193 670 209 74 0 chr20 47155229 47155392 -19512613 + L1MD2 LINE L1 6164 6338 -21 722 185 8 0 chr20 47155411 47155530 -19512475 - FLAM_C SINE Alu -21 122 3 286 169 34 34 chr20 47155664 47155723 -19512282 - MER81 DNA DNA 0 114 56 227 243 14 43 chr20 47155684 47155754 -19512251 + MER81 DNA DNA 39 106 -8 * 2117 119 0 0 chr20 47155770 47156065 -19511940 - AluSx SINE Alu -17 295 1 518 181 0 0 chr20 47156079 47156162 -19511843 - FAM SINE Alu -20 165 83 1494 153 72 81 chr20 47156181 47156541 -19511464 + LTR8A LTR ERV1 1 357 -370 2297 90 0 0 chr20 47156543 47156843 -19511162 - AluY SINE Alu -11 300 1 2147 91 0 19 chr20 47156853 47157160 -19510845 - AluY SINE Alu -10 301 1 460 208 137 81 chr20 47157166 47157363 -19510642 + Charlie8 DNA MER1_type 57 264 -2153 233 294 168 0 chr20 47157466 47157585 -19510420 + L2 LINE L2 3174 3312 -1 2098 75 6 87 chr20 47157590 47157924 -19510081 + AluSc SINE Alu 1 307 -2 392 130 14 0 chr20 47157931 47158000 -19510005 + GA-rich Low_complexity Low_complexity 3 72 0 1089 137 0 0 chr20 47158196 47158357 -19509648 + FRAM SINE Alu 1 157 -19 1545 139 13 73 chr20 47159104 47159241 -19508764 + AluJb SINE Alu 1 112 -200 2271 98 0 0 chr20 47159241 47159537 -19508468 + AluSg SINE Alu 1 296 -14 1545 139 13 73 chr20 47159537 47159701 -19508304 + AluJb SINE Alu 112 284 -28 243 299 0 0 chr20 47159806 47159873 -19508132 + MER113 DNA MER1_type? 1 67 -454 454 69 0 0 chr20 47159873 47159931 -19508074 - Alu SINE Alu -17 295 238 2643 133 89 50 chr20 47159934 47160452 -19507553 + MER50 LTR ERV1 1 538 -196 833 167 87 7 chr20 47160496 47160646 -19507359 + FRAM SINE Alu 5 166 0 999 273 134 30 chr20 47160657 47161023 -19506982 + MLT1K LTR MaLR 162 565 -23 555 298 78 46 chr20 47161061 47161343 -19506662 + MLT1L LTR MaLR 3 293 -322 1920 92 19 11 chr20 47161706 47161977 -19506028 + AluSx SINE Alu 1 273 -39 235 304 43 26 chr20 47161978 47162093 -19505912 - MLT1K LTR MaLR -392 196 80 359 257 111 34 chr20 47162375 47162676 -19505329 - MLT1J2 LTR MaLR -8 442 59 1059 161 36 16 chr20 47162809 47163001 -19505004 - MER20 DNA MER1_type 0 219 24 1367 192 83 21 chr20 47163001 47163130 -19504875 - L1ME3 LINE L1 -118 6044 5924 2079 118 0 0 chr20 47163130 47163426 -19504579 - AluSx SINE Alu -15 297 2 1367 192 83 21 chr20 47163426 47163634 -19504371 - L1ME3 LINE L1 -238 5924 5686 1295 104 0 0 chr20 47163636 47163809 -19504196 - AluSx SINE Alu -11 301 129 512 101 0 0 chr20 47163811 47163880 -19504125 - AluSx SINE Alu -242 70 2 349 209 88 0 chr20 47163885 47163976 -19504029 - L1ME3 LINE L1 -476 5688 5590 1744 138 21 7 chr20 47164009 47164325 -19503680 - AluSq SINE Alu 0 320 1 208 214 100 43 chr20 47164430 47164500 -19503505 + MIR SINE MIR 71 144 -118 1724 139 44 0 chr20 47164502 47164797 -19503208 - AluSx SINE Alu -4 308 1 2014 95 27 201 chr20 47164825 47164917 -19503088 + MSTC LTR MaLR 1 107 -321 2121 110 10 7 chr20 47164917 47165226 -19502779 + AluSx SINE Alu 1 310 -2 2014 95 27 201 chr20 47165226 47165651 -19502354 + MSTC LTR MaLR 107 428 0 681 241 67 49 chr20 47165651 47165874 -19502131 + MER20B DNA MER1_type 306 532 -251 1317 116 124 9 chr20 47166011 47166236 -19501769 + AluSx SINE Alu 45 295 -17 202 298 0 18 chr20 47166246 47166303 -19501702 - MIR SINE MIR -105 157 102 294 103 0 0 chr20 47166362 47166401 -19501604 - MLT2B1 LTR ERVL 0 515 477 534 65 33 0 chr20 47166401 47166493 -19501512 + (TAGA)n Simple_repeat Simple_repeat 3 97 0 275 88 0 0 chr20 47166493 47166527 -19501478 + U2 snRNA snRNA 3 36 -152 640 103 52 34 chr20 47166537 47166837 -19501168 + (TAGA)n Simple_repeat Simple_repeat 1 294 -342 2000 113 0 0 chr20 47166837 47167112 -19500893 + AluSx SINE Alu 19 293 -19 640 103 52 34 chr20 47167112 47167162 -19500843 + (TAGA)n Simple_repeat Simple_repeat 294 636 0 2305 179 81 7 chr20 47167163 47167598 -19500407 - MLT2B1 LTR ERVL -20 500 34 1210 98 6 0 chr20 47167865 47168029 -19499976 - AluSg/x SINE Alu -12 300 136 372 144 6 0 chr20 47168034 47168106 -19499899 - AluS SINE Alu -241 58 1 594 221 28 121 chr20 47168112 47168291 -19499714 + L1MC5 LINE L1 7675 7818 -143 1737 157 0 47 chr20 47168291 47168469 -19499536 - AluJo SINE Alu -4 308 150 1816 132 38 3 chr20 47168469 47168756 -19499249 - AluJb SINE Alu -15 297 1 1737 157 0 47 chr20 47168756 47168896 -19499109 - AluJo SINE Alu -162 150 5 594 221 28 121 chr20 47168896 47169005 -19499000 + L1MC5 LINE L1 7818 7936 -25 2212 116 3 0 chr20 47169047 47169357 -19498648 - AluSx SINE Alu -1 311 1 915 300 12 0 chr20 47169655 47169895 -19498110 - MIR SINE MIR 0 262 20 2183 105 0 3 chr20 47170056 47170362 -19497643 + AluSx SINE Alu 1 305 -7 314 267 156 0 chr20 47170490 47170580 -19497425 - L2 LINE L2 -10 3303 3200 353 275 57 67 chr20 47170580 47170773 -19497232 + MLT1H LTR MaLR 134 324 -225 1321 156 41 86 chr20 47170861 47170932 -19497073 + AluJb SINE Alu 1 74 -238 1731 147 0 0 chr20 47170932 47171198 -19496807 + AluSx SINE Alu 18 283 -29 1321 156 41 86 chr20 47171198 47171440 -19496565 + AluJb SINE Alu 74 300 -12 691 108 36 9 chr20 47172115 47172226 -19495779 - MER69 DNA AcHobo 0 2526 2413 1732 160 6 28 chr20 47172226 47172545 -19495460 + AluJb SINE Alu 1 312 0 271 148 16 16 chr20 47172553 47172614 -19495391 + GA-rich Low_complexity Low_complexity 6 66 0 1758 149 0 38 chr20 47172639 47172954 -19495051 + AluJb SINE Alu 1 303 -9 1250 231 115 62 chr20 47172981 47173166 -19494839 + MLT1F LTR MaLR 1 175 -367 2036 126 7 0 chr20 47173166 47173467 -19494538 - AluSx SINE Alu -9 303 1 1250 231 115 62 chr20 47173467 47173796 -19494209 + MLT1F LTR MaLR 175 542 0 889 161 0 19 chr20 47173868 47174023 -19493982 - FRAM SINE Alu -14 152 1 189 333 26 26 chr20 47174114 47174192 -19493813 + L2 LINE L2 3195 3272 0 417 303 34 0 chr20 47174194 47174313 -19493692 - MIR SINE MIR -84 178 56 1438 163 62 21 chr20 47174427 47174716 -19493289 + AluJb SINE Alu 5 305 -7 2180 110 0 3 chr20 47174782 47175090 -19492915 + AluSx SINE Alu 1 307 -5 252 143 0 0 chr20 47175090 47175132 -19492873 + (TA)n Simple_repeat Simple_repeat 1 42 0 262 244 0 58 chr20 47175727 47175813 -19492192 + L2 LINE L2 3214 3294 -19 567 345 16 32 chr20 47175973 47176071 -19491934 + MLT1K LTR MaLR 10 108 -480 1626 179 0 35 chr20 47176071 47176389 -19491616 - AluJo SINE Alu -5 307 1 567 345 16 32 chr20 47176389 47176539 -19491466 + MLT1K LTR MaLR 108 254 -334 2101 108 0 7 chr20 47176566 47176861 -19491144 + AluSq SINE Alu 1 293 -20 27 0 0 26 chr20 47176861 47176885 -19491120 + AT_rich Low_complexity Low_complexity 1 25 -12 2393 75 0 0 chr20 47176885 47177191 -19490814 + AluY SINE Alu 1 306 -5 27 0 0 26 chr20 47177191 47177204 -19490801 + AT_rich Low_complexity Low_complexity 25 37 0 2334 159 26 46 chr20 47177204 47177267 -19490738 - L1MC1 LINE L1 -5 6328 6265 1548 181 24 20 chr20 47177267 47177560 -19490445 + AluJo SINE Alu 1 294 -8 2007 141 0 0 chr20 47177564 47177861 -19490144 + AluSx SINE Alu 1 297 -15 1986 108 7 0 chr20 47177863 47178142 -19489863 + AluSq SINE Alu 1 281 -32 388 0 19 19 chr20 47178145 47178198 -19489807 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 2334 159 26 46 chr20 47178198 47178619 -19489386 - L1MC1 LINE L1 -74 6259 5842 818 182 118 166 chr20 47178626 47178809 -19489196 + MSTB2 LTR MaLR 23 213 -244 2147 90 24 0 chr20 47178809 47179097 -19488908 + AluSp SINE Alu 1 295 -18 818 182 118 166 chr20 47179097 47179206 -19488799 + MSTB2 LTR MaLR 213 326 -131 2217 106 0 0 chr20 47179206 47179518 -19488487 - AluSx SINE Alu 0 312 1 1844 156 0 3 chr20 47179528 47179816 -19488189 - AluJo SINE Alu -25 287 1 1507 181 24 24 chr20 47179819 47179972 -19488033 - AluJo SINE Alu -10 292 140 2118 109 0 13 chr20 47179972 47180304 -19487701 - AluSx SINE Alu 0 312 1 1937 121 0 20 chr20 47180305 47180468 -19487537 - AluSc SINE Alu -17 292 136 1647 119 29 74 chr20 47180468 47180780 -19487225 - AluSx SINE Alu -14 298 1 1937 121 0 20 chr20 47180780 47180914 -19487091 - AluSc SINE Alu -173 136 1 1507 181 24 24 chr20 47180914 47181050 -19486955 - AluJo SINE Alu -161 141 1 818 182 118 166 chr20 47181050 47181198 -19486807 + MSTB2 LTR MaLR 337 457 0 2465 145 19 113 chr20 47181198 47181257 -19486748 - L1MC1 LINE L1 -486 5858 5795 1918 134 0 23 chr20 47181257 47181563 -19486442 - AluSx SINE Alu -13 299 1 2465 145 19 113 chr20 47181563 47181916 -19486089 - L1MC1 LINE L1 -549 5795 5410 2109 110 0 28 chr20 47181916 47182234 -19485771 + AluSc SINE Alu 1 309 0 2465 145 19 113 chr20 47182234 47182260 -19485745 - L1MC1 LINE L1 -934 5410 5383 1860 159 0 3 chr20 47182260 47182561 -19485444 + AluJb SINE Alu 1 300 -12 2465 145 19 113 chr20 47182561 47182696 -19485309 - L1MC1 LINE L1 -961 5383 5341 204 125 0 0 chr20 47182699 47182731 -19485274 + (TA)n Simple_repeat Simple_repeat 1 32 0 2297 88 0 0 chr20 47182731 47183028 -19484977 - AluSg SINE Alu -13 297 1 321 67 0 33 chr20 47183029 47183088 -19484917 - L1MC1 LINE L1 -978 5366 5313 2210 106 3 0 chr20 47183094 47183406 -19484599 - AluSp SINE Alu 0 313 1 1674 169 10 7 chr20 47183411 47183712 -19484293 - AluJb SINE Alu -10 302 1 2038 120 0 0 chr20 47183712 47184002 -19484003 - AluSg SINE Alu -19 291 1 894 203 31 12 chr20 47184037 47184200 -19483805 - FAM SINE Alu -9 166 1 293 173 29 101 chr20 47184215 47184260 -19483745 - L1M4 LINE L1 -832 5314 5267 2046 116 7 0 chr20 47184260 47184554 -19483451 - AluSx SINE Alu -16 296 1 293 173 29 101 chr20 47184554 47184647 -19483358 - L1M4 LINE L1 -879 5267 5186 437 235 44 66 chr20 47184651 47184798 -19483207 + MLT1K LTR MaLR 252 401 -187 2220 50 21 0 chr20 47184798 47185077 -19482928 + AluY SINE Alu 21 305 -6 437 235 44 66 chr20 47185077 47185097 -19482908 + MLT1K LTR MaLR 401 417 -171 1468 180 32 3 chr20 47185097 47185380 -19482625 + AluJo SINE Alu 21 311 -1 437 235 44 66 chr20 47185380 47185394 -19482611 + MLT1K LTR MaLR 417 430 -158 255 125 0 0 chr20 47185416 47185456 -19482549 + (GGGGA)n Simple_repeat Simple_repeat 4 43 0 313 262 66 38 chr20 47185457 47185640 -19482365 + L1MC/D LINE L1 5340 5527 -2281 1094 237 77 109 chr20 47185684 47186088 -19481917 - MLT1J LTR MaLR -53 458 69 1597 168 6 51 chr20 47186088 47186404 -19481601 + AluJb SINE Alu 1 302 -10 1094 237 77 109 chr20 47186404 47186467 -19481538 - MLT1J LTR MaLR -442 69 6 34 42 0 0 chr20 47186473 47186521 -19481484 + AT_rich Low_complexity Low_complexity 1 48 0 1997 132 6 3 chr20 47186521 47186832 -19481173 - AluSx SINE Alu 0 312 1 468 204 108 54 chr20 47186855 47187022 -19480983 - MLT1K LTR MaLR -26 562 387 1968 114 55 0 chr20 47187022 47187312 -19480693 - AluSx SINE Alu -6 306 1 2268 76 3 10 chr20 47187346 47187648 -19480357 - AluSx SINE Alu -12 300 1 330 67 0 0 chr20 47187657 47187702 -19480303 + (TTTTTA)n Simple_repeat Simple_repeat 2 46 0 934 298 58 33 chr20 47187725 47188087 -19479918 - MLT1K LTR MaLR -200 388 18 287 374 88 6 chr20 47188362 47188533 -19479472 + L3 LINE CR1 51 235 -1342 2182 110 0 22 chr20 47188542 47188882 -19479123 - AluSx SINE Alu 0 333 1 474 256 164 27 chr20 47188915 47189134 -19478871 - L1MB7 LINE L1 0 6184 5936 2252 88 0 0 chr20 47189134 47189440 -19478565 + AluSg SINE Alu 1 306 -4 2034 136 0 0 chr20 47189456 47189750 -19478255 + AluSx SINE Alu 1 294 -18 1479 202 13 7 chr20 47189750 47190052 -19477953 - AluJo SINE Alu -8 304 1 283 245 43 43 chr20 47190056 47190150 -19477855 - MER112 DNA MER1_type -161 99 6 1972 118 0 0 chr20 47190426 47190706 -19477299 + AluSx SINE Alu 1 280 -32 229 140 18 18 chr20 47190721 47190760 -19477245 + A-rich Low_complexity Low_complexity 2 46 -12 2332 74 40 3 chr20 47190760 47191058 -19476947 + AluY SINE Alu 1 309 -2 229 140 18 18 chr20 47191058 47191072 -19476933 + A-rich Low_complexity Low_complexity 45 58 0 1064 152 43 105 chr20 47191356 47191632 -19476373 - MER58B DNA MER1_type -6 335 77 2227 133 0 0 chr20 47191633 47191941 -19476064 + AluSx SINE Alu 1 308 -4 27 29 0 0 chr20 47192269 47192303 -19475702 + AT_rich Low_complexity Low_complexity 1 34 0 1157 264 50 48 chr20 47192314 47192420 -19475585 - L1MC4a LINE L1 -1907 5901 5797 1007 171 17 88 chr20 47192420 47192541 -19475464 + MER58A DNA MER1_type 1 98 -2322 2254 110 3 0 chr20 47192541 47192832 -19475173 - AluSx SINE Alu -20 292 1 1007 171 17 88 chr20 47192832 47192949 -19475056 + MER58A DNA MER1_type 98 222 -2 1157 264 50 48 chr20 47192949 47193341 -19474664 - L1MC4a LINE L1 -2011 5797 5402 1057 215 20 36 chr20 47193342 47193644 -19474361 - MLT1C LTR MaLR 0 467 171 2341 97 0 25 chr20 47193646 47193966 -19474039 - AluSx SINE Alu 0 312 1 344 206 23 0 chr20 47194077 47194210 -19473795 + CT-rich Low_complexity Low_complexity 1 136 0 2120 145 3 0 chr20 47194313 47194623 -19473382 - AluSx SINE Alu 0 312 2 2482 71 0 3 chr20 47194976 47195273 -19472732 + AluY SINE Alu 1 296 -15 1416 200 23 55 chr20 47195322 47195418 -19472587 + AluJo SINE Alu 1 99 -213 2385 100 0 7 chr20 47195418 47195728 -19472277 + AluY SINE Alu 1 308 -3 1416 200 23 55 chr20 47195728 47195941 -19472064 + AluJo SINE Alu 99 300 -12 578 188 10 0 chr20 47196196 47196297 -19471708 + MIR SINE MIR 63 164 -98 201 235 35 24 chr20 47196332 47196417 -19471588 + (CATATA)n Simple_repeat Simple_repeat 5 90 0 * 271 208 60 13 chr20 47196384 47196533 -19471472 + (TA)n Simple_repeat Simple_repeat 1 156 0 2562 68 0 7 chr20 47196572 47196882 -19471123 - AluSc SINE Alu -1 308 1 838 148 0 15 chr20 47196882 47197017 -19470988 - AluJo/FLAM SINE Alu -169 133 1 503 121 48 12 chr20 47197205 47197288 -19470717 + FLAM SINE Alu 46 131 -12 946 157 0 0 chr20 47197306 47197440 -19470565 + FLAM_C SINE Alu 1 134 -9 1398 128 206 4 chr20 47197724 47197967 -19470038 + AluSg1 SINE Alu 3 294 -15 331 322 19 9 chr20 47198006 47198123 -19469882 + MIR SINE MIR 8 127 -81 455 296 43 1 chr20 47198140 47198358 -19469647 - LTR16A LTR ERVL -16 434 178 727 199 46 83 chr20 47198362 47198460 -19469545 + MER20 DNA MER1_type 1 101 -118 1584 87 14 23 chr20 47198460 47198679 -19469326 + AluSg/x SINE Alu 85 301 -11 727 199 46 83 chr20 47198679 47198796 -19469209 + MER20 DNA MER1_type 101 208 -11 275 229 18 59 chr20 47198814 47198936 -19469069 - LTR16A1 LTR ERVL -302 148 31 266 163 0 0 chr20 47198984 47199027 -19468978 - MER57A LTR ERV1 -66 337 295 1011 174 15 30 chr20 47199119 47199320 -19468685 - MER20 DNA MER1_type 0 219 22 332 143 0 0 chr20 47199322 47199371 -19468634 + MER66A LTR ERV1 288 336 -142 1706 191 0 17 chr20 47199524 47199823 -19468182 - AluJb SINE Alu -18 294 1 2600 172 60 72 chr20 47199857 47200235 -19467770 - LTR8A LTR ERV1 -2 725 356 1631 138 28 28 chr20 47200235 47200579 -19467426 - AluJo SINE Alu 0 344 1 2600 172 60 72 chr20 47200579 47200861 -19467144 - LTR8A LTR ERV1 -371 356 72 2359 105 3 0 chr20 47200861 47201167 -19466838 + AluSg SINE Alu 1 307 -3 1055 99 0 0 chr20 47201177 47201308 -19466697 + AluSq/x SINE Alu 5 135 -178 2365 89 0 3 chr20 47201330 47201633 -19466372 + AluY SINE Alu 1 302 -9 2179 125 0 0 chr20 47201640 47201936 -19466069 - AluSx SINE Alu -13 299 4 1117 122 79 0 chr20 47201938 47202102 -19465903 - FRAM SINE Alu 0 176 1 195 242 23 121 chr20 47202106 47202167 -19465838 - L2 LINE L2 -47 3266 3223 2263 109 7 0 chr20 47202167 47202460 -19465545 - AluSx SINE Alu -17 295 1 195 242 23 121 chr20 47202460 47202530 -19465475 - L2 LINE L2 -90 3223 3148 2502 85 0 0 chr20 47202536 47202841 -19465164 + AluSg SINE Alu 1 305 -5 23 0 0 0 chr20 47202845 47202868 -19465137 + AT_rich Low_complexity Low_complexity 1 23 0 2275 114 3 0 chr20 47202997 47203296 -19464709 - AluSx SINE Alu -12 300 1 343 285 38 48 chr20 47204195 47204381 -19463624 - MLT1J2 LTR MaLR -3 447 264 182 268 204 25 chr20 47204420 47204577 -19463428 - L2 LINE L2 -305 3008 2824 320 251 78 90 chr20 47204626 47204698 -19463307 - MER102b DNA MER1_type -1127 301 230 2273 82 4 0 chr20 47204698 47205025 -19462980 + AluSg SINE Alu 1 328 0 320 251 78 90 chr20 47205025 47205118 -19462887 - MER102b DNA MER1_type -1198 230 137 1734 171 0 0 chr20 47205150 47205413 -19462592 + AluJo SINE Alu 1 263 -49 31 19 0 38 chr20 47205413 47205436 -19462569 + AT_rich Low_complexity Low_complexity 1 23 -28 2143 118 3 0 chr20 47205436 47205725 -19462280 - AluSx SINE Alu -22 290 1 31 19 0 38 chr20 47205725 47205754 -19462251 + AT_rich Low_complexity Low_complexity 23 51 0 1871 149 0 67 chr20 47206180 47206389 -19461616 - AluJb SINE Alu -10 302 119 2148 134 0 3 chr20 47206389 47206695 -19461310 + AluSx SINE Alu 1 305 -7 1871 149 0 67 chr20 47206695 47206800 -19461205 - AluJb SINE Alu -193 119 9 1782 125 6 61 chr20 47207435 47207579 -19460426 + AluJo SINE Alu 3 87 -215 2424 76 0 29 chr20 47207579 47207720 -19460285 + AluSx SINE Alu 1 144 -168 2316 104 0 3 chr20 47207720 47208018 -19459987 + AluSg SINE Alu 2 298 -12 2424 76 0 29 chr20 47208018 47208192 -19459813 + AluSx SINE Alu 144 307 -5 1782 125 6 61 chr20 47208192 47208397 -19459608 + AluJo SINE Alu 87 302 0 210 71 0 0 chr20 47208397 47208425 -19459580 + (GGGA)n Simple_repeat Simple_repeat 2 29 0 479 93 0 13 chr20 47209276 47209351 -19458654 + (TTCC)n Simple_repeat Simple_repeat 1 74 0 1939 141 20 7 chr20 47209351 47209648 -19458357 - AluJb SINE Alu -11 301 1 592 136 80 80 chr20 47209722 47209847 -19458158 + MER63 DNA MER1_type 1 751 -311 1315 142 26 0 chr20 47209995 47210185 -19457820 - AluJo SINE Alu -84 228 34 556 283 62 81 chr20 47210381 47210548 -19457457 + MLT1K LTR MaLR 101 261 -327 2258 103 3 13 chr20 47210548 47210850 -19457155 - AluSc SINE Alu -10 299 1 556 283 62 81 chr20 47210850 47211004 -19457001 + MLT1K LTR MaLR 261 416 -172 240 35 0 0 chr20 47211056 47211085 -19456920 + (TTTTC)n Simple_repeat Simple_repeat 1 29 0 742 106 35 0 chr20 47211087 47211228 -19456777 + CT-rich Low_complexity Low_complexity 3 148 0 2369 57 7 4 chr20 47211230 47211509 -19456496 - AluSq SINE Alu -33 280 1 426 191 32 11 chr20 47211515 47211609 -19456396 + MLT1K LTR MaLR 489 584 -4 354 284 197 16 chr20 47211615 47211798 -19456207 - L2 LINE L2 -382 2932 2717 252 0 0 0 chr20 47212044 47212072 -19455933 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 2212 133 0 0 chr20 47212177 47212478 -19455527 - AluSx SINE Alu -11 301 1 976 196 22 61 chr20 47212544 47212724 -19455281 - MER58A DNA MER1_type -2196 224 53 2201 103 0 14 chr20 47212724 47213069 -19454936 + AluSx SINE Alu 1 312 0 976 196 22 61 chr20 47213069 47213117 -19454888 - MER58A DNA MER1_type -2367 53 5 1626 146 3 63 chr20 47213156 47213484 -19454521 + AluJb SINE Alu 1 310 0 21 0 0 0 chr20 47213486 47213507 -19454498 + AT_rich Low_complexity Low_complexity 1 21 0 439 285 148 49 chr20 47213603 47213736 -19454269 + MLT1K LTR MaLR 14 133 -455 636 242 51 74 chr20 47213736 47213951 -19454054 - MER63A DNA MER1_type 0 210 1 439 285 148 49 chr20 47213951 47214122 -19453883 + MLT1K LTR MaLR 133 348 -240 688 215 15 0 chr20 47214373 47214503 -19453502 - AluSg/x SINE Alu -3 309 178 2137 138 0 0 chr20 47214503 47214799 -19453206 - AluSx SINE Alu -16 296 1 1031 175 9 58 chr20 47214800 47215023 -19452982 - AluJo SINE Alu -15 297 86 284 341 16 24 chr20 47215067 47215190 -19452815 + LTR16C LTR ERVL 146 267 -224 2655 49 0 13 chr20 47215298 47215605 -19452400 + AluY SINE Alu 1 303 -8 2219 109 0 0 chr20 47216089 47216407 -19451598 - AluSx SINE Alu 0 318 1 311 336 82 0 chr20 47216649 47216795 -19451210 - MLT1K LTR MaLR -252 336 179 1801 90 27 136 chr20 47216795 47217127 -19450878 - AluSq SINE Alu -17 296 1 2177 104 30 3 chr20 47217152 47217451 -19450554 + AluSg SINE Alu 1 307 -3 180 0 0 0 chr20 47217492 47217512 -19450493 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 802 130 17 0 chr20 47217515 47217630 -19450375 - AluJb SINE Alu -195 117 1 430 225 0 73 chr20 47217630 47217737 -19450268 - L1M4 LINE L1 -1222 4924 4830 2530 67 3 6 chr20 47217737 47218049 -19449956 - AluY SINE Alu 0 311 1 430 225 0 73 chr20 47218049 47218092 -19449913 - L1M4 LINE L1 -1316 4830 4785 1829 174 27 0 chr20 47218092 47218386 -19449619 - AluJo SINE Alu -6 306 5 277 211 158 32 chr20 47218458 47218553 -19449452 - L2 LINE L2 -6 3266 3160 254 333 28 79 chr20 47218560 47218711 -19449294 + MLT1K LTR MaLR 2 144 -444 2337 100 7 0 chr20 47218711 47219010 -19448995 + AluSg SINE Alu 1 301 -9 254 333 28 79 chr20 47219010 47219035 -19448970 + MLT1K LTR MaLR 144 169 -419 1853 113 95 3 chr20 47219285 47219569 -19448436 - AluSx SINE Alu -2 310 1 1105 181 36 20 chr20 47219781 47220029 -19447976 - MER112 DNA MER1_type 0 256 5 338 221 0 13 chr20 47220047 47220124 -19447881 + MLT1L LTR MaLR 2 77 -538 317 230 0 23 chr20 47220121 47220208 -19447797 + MLT1L LTR MaLR 27 111 -504 * 1417 152 33 25 chr20 47220267 47220438 -19447567 - AluJo SINE Alu -11 301 126 2224 122 6 10 chr20 47220438 47220749 -19447256 - AluSx SINE Alu -2 310 1 1417 152 33 25 chr20 47220749 47220821 -19447184 - AluJo SINE Alu -186 126 56 722 193 30 12 chr20 47220908 47221074 -19446931 + Charlie1 DNA MER1_type 2344 2512 -249 1410 178 8 8 chr20 47221076 47221351 -19446654 + AluJo SINE Alu 35 309 0 770 166 88 0 chr20 47221352 47221545 -19446460 + Charlie1 DNA MER1_type 2502 2711 -50 2215 97 11 0 chr20 47221559 47221872 -19446133 - AluSx SINE Alu 0 316 1 1171 236 64 31 chr20 47221893 47222282 -19445723 + MLT1L LTR MaLR 144 545 -70 483 250 0 18 chr20 47222329 47222441 -19445564 + L2 LINE L2 3204 3313 0 450 0 0 0 chr20 47222502 47222552 -19445453 + (TG)n Simple_repeat Simple_repeat 2 51 0 790 203 0 0 chr20 47222553 47222691 -19445314 - AluJb SINE Alu -39 273 136 2385 86 3 0 chr20 47222821 47223112 -19444893 - AluSp SINE Alu -21 292 1 379 298 8 46 chr20 47223373 47223504 -19444501 - MLT1J LTR MaLR -178 333 208 466 234 9 147 chr20 47223560 47223659 -19444346 - MLT1J LTR MaLR -312 199 88 2215 108 26 10 chr20 47223659 47223966 -19444039 + AluSx SINE Alu 1 312 0 466 234 9 147 chr20 47223966 47223985 -19444020 - MLT1J LTR MaLR -423 88 68 2130 124 7 0 chr20 47223985 47224283 -19443722 + AluSx SINE Alu 1 300 -12 466 234 9 147 chr20 47224283 47224394 -19443611 - MLT1J LTR MaLR -443 68 1 237 305 61 0 chr20 47224398 47224480 -19443525 + L2 LINE L2 3225 3311 -2 2527 68 3 0 chr20 47224480 47224789 -19443216 + AluY SINE Alu 1 310 -1 1891 153 0 29 chr20 47224822 47224984 -19443021 - AluJo SINE Alu -14 298 148 2269 90 0 17 chr20 47224984 47225283 -19442722 - AluSx SINE Alu -17 295 2 1891 153 0 29 chr20 47225283 47225427 -19442578 - AluJo SINE Alu -164 148 1 1886 148 21 0 chr20 47225508 47225798 -19442207 + AluJb SINE Alu 1 296 -16 2397 72 0 13 chr20 47225798 47226103 -19441902 + AluY SINE Alu 1 301 -10 547 205 76 34 chr20 47226144 47226409 -19441596 - MLT1K LTR MaLR -118 470 146 2273 115 0 10 chr20 47227026 47227338 -19440667 - AluSq SINE Alu -4 309 1 323 263 30 0 chr20 47227480 47227499 -19440506 + (CATA)n Simple_repeat Simple_repeat 3 20 -84 2116 124 16 0 chr20 47227499 47227805 -19440200 + AluSx SINE Alu 1 311 -1 323 263 30 0 chr20 47227805 47227884 -19440121 + (CATA)n Simple_repeat Simple_repeat 20 104 0 2231 103 0 3 chr20 47228224 47228524 -19439481 + AluSq SINE Alu 2 300 -13 2271 101 0 7 chr20 47228538 47228835 -19439170 + AluSq SINE Alu 1 295 -18 182 114 0 29 chr20 47228928 47228963 -19439042 + (TCTCCC)n Simple_repeat Simple_repeat 5 38 0 749 146 118 7 chr20 47228964 47229108 -19438897 - L1MB5 LINE L1 -3 6171 6012 2270 91 3 52 chr20 47229429 47229758 -19438247 - AluSq SINE Alu 0 313 1 277 256 113 62 chr20 47229831 47229991 -19438014 + MLT1L LTR MaLR 241 408 -207 191 43 65 22 chr20 47230088 47230134 -19437871 + T-rich Low_complexity Low_complexity 2 49 0 1604 159 20 0 chr20 47230203 47230454 -19437551 - AluJo SINE Alu -56 256 1 1836 154 10 0 chr20 47230623 47230916 -19437089 - AluJb SINE Alu -16 296 1 2240 94 3 3 chr20 47231019 47231306 -19436699 + AluSx SINE Alu 4 290 -22 2452 72 3 0 chr20 47231328 47231619 -19436386 + AluSp SINE Alu 3 294 -19 1392 162 5 0 chr20 47231629 47231839 -19436166 + AluJb SINE Alu 86 296 -16 2361 98 0 0 chr20 47231846 47232143 -19435862 + AluSq SINE Alu 1 297 -16 2035 133 7 0 chr20 47232213 47232525 -19435480 - AluSx SINE Alu 0 316 3 24 32 0 0 chr20 47232592 47232623 -19435382 + AT_rich Low_complexity Low_complexity 1 31 0 2133 147 0 0 chr20 47232799 47233092 -19434913 + AluSq SINE Alu 1 293 -20 1232 111 0 6 chr20 47233105 47233267 -19434738 + AluSq SINE Alu 1 161 -152 571 100 0 0 chr20 47233497 47233587 -19434418 + MER83B LTR ERV1 223 312 -66 1148 239 96 79 chr20 47233652 47233715 -19434290 - MLT1K LTR MaLR -4 584 524 2064 150 3 0 chr20 47233715 47234009 -19433996 + AluSx SINE Alu 1 295 -17 1148 239 96 79 chr20 47234009 47234517 -19433488 - MLT1K LTR MaLR -64 524 3 986 266 75 20 chr20 47234942 47235291 -19432714 + MLT1J LTR MaLR 81 448 -63 1628 128 15 51 chr20 47235333 47235606 -19432399 + AluJo SINE Alu 40 302 -10 2356 102 0 0 chr20 47235846 47236140 -19431865 + AluSx SINE Alu 1 294 -18 2400 58 3 14 chr20 47236272 47236566 -19431439 + AluY SINE Alu 1 291 -20 3011 6 0 0 chr20 47236574 47236891 -19431114 + AluYb8 SINE Alu 1 317 -1 348 172 75 32 chr20 47236977 47237070 -19430935 + MLT1J LTR MaLR 81 177 -334 536 272 325 39 chr20 47237282 47237367 -19430638 - L2 LINE L2 -447 2867 2807 1574 127 59 108 chr20 47237367 47237512 -19430493 + AluJo SINE Alu 1 152 -160 2183 110 7 0 chr20 47237512 47237815 -19430190 + AluSg SINE Alu 1 305 0 1574 127 59 108 chr20 47237815 47237836 -19430169 + AluJo SINE Alu 152 172 -140 2306 109 3 7 chr20 47237836 47238138 -19429867 + AluSx SINE Alu 1 301 -11 1574 127 59 108 chr20 47238138 47238276 -19429729 + AluJo SINE Alu 172 292 -20 2592 68 0 3 chr20 47238281 47238591 -19429414 - AluY SINE Alu -2 309 1 536 272 325 39 chr20 47238591 47239084 -19428921 - L2 LINE L2 -509 2805 2116 2146 89 60 3 chr20 47239103 47239385 -19428620 - AluSx SINE Alu -13 299 2 319 286 18 27 chr20 47239439 47239551 -19428454 + L2 LINE L2 1744 1854 -1460 240 35 0 0 chr20 47239569 47239598 -19428407 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 2356 66 28 0 chr20 47239613 47239900 -19428105 - AluY SINE Alu -1 310 16 1746 157 0 11 chr20 47239900 47240178 -19427827 - AluJb SINE Alu -35 277 1 2258 105 0 7 chr20 47240186 47240482 -19427523 - AluSq SINE Alu -19 294 1 495 118 26 0 chr20 47240494 47240570 -19427435 + AluSg/x SINE Alu 215 292 -17 902 150 0 0 chr20 47240586 47240719 -19427286 + FLAM_C SINE Alu 1 133 0 1163 197 120 31 chr20 47240822 47241081 -19426924 + AluJo SINE Alu 1 282 -30 1844 94 91 0 chr20 47241103 47241357 -19426648 - AluSg SINE Alu -32 278 2 2001 135 44 0 chr20 47241363 47241659 -19426346 - AluSq SINE Alu -4 309 1 28 0 0 0 chr20 47241660 47241688 -19426317 + AT_rich Low_complexity Low_complexity 1 28 0 2531 56 0 7 chr20 47241688 47241990 -19426015 + AluY SINE Alu 1 300 -11 437 279 70 31 chr20 47241990 47242119 -19425886 + L2 LINE L2 2901 3034 -279 323 302 125 0 chr20 47242208 47242304 -19425701 + L2 LINE L2 3163 3270 -2 2172 109 30 3 chr20 47242405 47242707 -19425298 + AluSq SINE Alu 2 311 -2 196 323 54 11 chr20 47243193 47243286 -19424719 + MIR SINE MIR 45 141 -67 304 171 9 126 chr20 47243416 47243527 -19424478 + MER5A DNA MER1_type 4 101 -88 1749 118 26 109 chr20 47243537 47243876 -19424129 + AluYb8 SINE Alu 2 312 -6 394 225 125 17 chr20 47243895 47244015 -19423990 + MER5A DNA MER1_type 47 179 -10 1244 224 131 13 chr20 47244038 47244530 -19423475 + MER39 LTR ERV1 1 707 0 1141 117 19 0 chr20 47244679 47244841 -19423164 - AluSg/x SINE Alu -14 296 132 416 202 0 79 chr20 47244884 47244947 -19423058 + MER5B DNA MER1_type 1 53 -125 2219 129 0 6 chr20 47244947 47245258 -19422747 + AluSx SINE Alu 3 311 -1 416 202 0 79 chr20 47245258 47245308 -19422697 + MER5B DNA MER1_type 53 105 -73 2499 74 10 0 chr20 47245326 47245623 -19422382 - AluSx SINE Alu -12 300 1 811 194 6 35 chr20 47245623 47245793 -19422212 - FRAM SINE Alu -1 165 1 1410 61 0 0 chr20 47245805 47245969 -19422036 - AluSg/x SINE Alu -15 297 134 2295 104 0 3 chr20 47245969 47246267 -19421738 - AluSg SINE Alu -13 297 1 211 219 151 0 chr20 47246620 47246693 -19421312 - MIR SINE MIR -130 132 49 2276 113 0 7 chr20 47246734 47247044 -19420961 - AluSx SINE Alu -4 308 1 972 236 108 14 chr20 47247044 47247395 -19420610 + L2 LINE L2 2076 2459 -855 1368 158 13 18 chr20 47247397 47247625 -19420380 + AluJo SINE Alu 33 259 -53 2119 106 22 0 chr20 47247640 47247942 -19420063 + AluSx SINE Alu 4 311 0 830 273 87 44 chr20 47247945 47248427 -19419578 + L2 LINE L2 2444 2974 -339 735 163 148 69 chr20 47248427 47248474 -19419531 - MER20 DNA MER1_type -1 218 176 2528 91 0 0 chr20 47248474 47248783 -19419222 - AluSg SINE Alu -1 309 1 735 163 148 69 chr20 47248783 47248937 -19419068 - MER20 DNA MER1_type -43 176 1 830 273 87 44 chr20 47248937 47249161 -19418844 + L2 LINE L2 2974 3187 -126 207 277 15 15 chr20 47249174 47249239 -19418766 + L2 LINE L2 3154 3218 -95 1481 94 5 20 chr20 47249242 47249444 -19418561 + AluSx SINE Alu 1 199 -113 442 104 0 0 chr20 47249445 47249512 -19418493 + AluSx SINE Alu 238 304 -5 204 176 39 20 chr20 47249514 47249565 -19418440 + L2 LINE L2 3262 3313 0 1493 166 48 86 chr20 47249723 47250007 -19417998 - MLT1C LTR MaLR 0 467 174 2094 136 0 37 chr20 47250007 47250046 -19417959 - AluSx SINE Alu 0 312 273 237 65 0 0 chr20 47250046 47250077 -19417928 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2094 136 0 37 chr20 47250077 47250361 -19417644 - AluSx SINE Alu -39 273 1 1493 166 48 86 chr20 47250361 47250372 -19417633 - MLT1C LTR MaLR -293 174 164 1425 186 102 11 chr20 47250372 47250647 -19417358 - AluJo SINE Alu -12 300 1 1895 139 54 0 chr20 47250651 47250946 -19417059 - AluJb SINE Alu -1 311 1 1493 166 48 86 chr20 47250946 47251041 -19416964 - MLT1C LTR MaLR -306 161 86 2045 137 41 0 chr20 47251041 47251333 -19416672 - AluSx SINE Alu -8 304 1 870 177 0 59 chr20 47251337 47251433 -19416572 - MLT1B LTR MaLR -214 176 95 2437 91 0 0 chr20 47251433 47251730 -19416275 + AluY SINE Alu 1 297 -14 870 177 0 59 chr20 47251730 47251819 -19416186 - MLT1B LTR MaLR -295 95 2 548 206 63 0 chr20 47251857 47251983 -19416022 - L2 LINE L2 -245 3068 2935 2584 75 0 0 chr20 47252066 47252385 -19415620 - AluSc SINE Alu 0 319 1 224 283 22 11 chr20 47252426 47252518 -19415487 - L2 LINE L2 -27 3286 3194 1897 160 0 7 chr20 47252581 47252875 -19415130 + AluSx SINE Alu 1 292 -20 2114 130 3 0 chr20 47252875 47253168 -19414837 + AluSx SINE Alu 1 294 -18 24 0 0 0 chr20 47253168 47253192 -19414813 + AT_rich Low_complexity Low_complexity 1 24 0 2195 115 3 0 chr20 47253192 47253526 -19414479 + AluSp SINE Alu 1 313 0 303 189 0 0 chr20 47253623 47253676 -19414329 - L2 LINE L2 -245 3068 3016 423 52 0 0 chr20 47254499 47254557 -19413448 + (GA)n Simple_repeat Simple_repeat 1 58 0 2163 140 0 0 chr20 47254633 47254933 -19413072 - AluSx SINE Alu -12 300 1 239 281 73 31 chr20 47254944 47255040 -19412965 - L2 LINE L2 -19 3253 3154 1858 171 3 3 chr20 47255295 47255594 -19412411 - AluJo SINE Alu -10 302 4 536 149 0 11 chr20 47255804 47255898 -19412107 - MER53 DNA DNA -96 93 1 2621 56 0 7 chr20 47256360 47256665 -19411340 - AluY SINE Alu -8 303 1 210 167 273 15 chr20 47256753 47256819 -19411186 - L2 LINE L2 -8 3264 3182 1983 149 10 0 chr20 47256853 47257149 -19410856 + AluJb SINE Alu 2 300 -12 2390 75 7 3 chr20 47257236 47257530 -19410475 - AluSq SINE Alu -18 295 1 202 244 12 58 chr20 47257534 47257620 -19410385 - L2 LINE L2 -199 3073 2992 636 226 124 32 chr20 47257646 47257832 -19410173 - MIR SINE MIR -24 238 36 218 312 108 71 chr20 47257911 47258264 -19409741 - L2 LINE L2 -528 2786 2421 770 218 19 0 chr20 47258491 47258647 -19409358 + MIR SINE MIR 92 250 -12 2318 87 0 29 chr20 47258971 47259282 -19408723 - AluSx SINE Alu -10 302 1 2297 98 0 28 chr20 47259313 47259630 -19408375 - AluSx SINE Alu -4 308 1 1147 134 0 18 chr20 47259630 47259801 -19408204 - AluSg/x SINE Alu -11 299 132 1935 108 4 0 chr20 47259801 47260052 -19407953 - AluSx SINE Alu -8 304 53 270 315 49 28 chr20 47260063 47260206 -19407799 - MIR SINE MIR -56 206 61 2131 105 16 26 chr20 47260420 47260583 -19407422 - AluSq SINE Alu -12 301 141 2212 115 0 7 chr20 47260583 47260887 -19407118 - AluSg SINE Alu -8 302 1 2131 105 16 26 chr20 47260887 47261027 -19406978 - AluSq SINE Alu -172 141 1 244 0 56 0 chr20 47261041 47261077 -19406928 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1179 88 75 0 chr20 47261079 47261238 -19406767 - AluSg/x SINE Alu -22 290 120 2281 107 10 3 chr20 47261244 47261554 -19406451 - AluSp SINE Alu -1 312 1 1832 185 0 3 chr20 47261556 47261854 -19406151 - AluJo SINE Alu -15 297 1 252 265 11 83 chr20 47261867 47261991 -19406014 + L2 LINE L2 2867 2979 -293 1165 207 3 83 chr20 47262057 47262171 -19405834 + AluJo SINE Alu 4 125 -187 2577 63 3 0 chr20 47262171 47262473 -19405532 - AluSp SINE Alu -10 303 1 1165 207 3 83 chr20 47262473 47262506 -19405499 + AluJo SINE Alu 125 159 -153 2321 90 10 22 chr20 47262506 47262817 -19405188 + AluSc SINE Alu 3 309 0 1165 207 3 83 chr20 47262817 47262958 -19405047 + AluJo SINE Alu 159 270 -42 2547 58 0 0 chr20 47262958 47263253 -19404752 + AluY SINE Alu 5 299 -12 2425 81 3 0 chr20 47263254 47263550 -19404455 + AluSx SINE Alu 3 299 -13 341 208 66 47 chr20 47263568 47263674 -19404331 + MIR SINE MIR 118 225 -37 2376 100 3 0 chr20 47263676 47263987 -19404018 + AluSx SINE Alu 1 312 0 578 320 77 8 chr20 47264009 47264243 -19403762 - MIR SINE MIR 0 262 13 571 254 60 34 chr20 47264501 47264769 -19403236 - L2 LINE L2 -356 2958 2684 2162 101 0 58 chr20 47264769 47265095 -19402910 + AluSx SINE Alu 1 307 -5 2304 101 0 22 chr20 47265097 47265414 -19402591 + AluSg SINE Alu 1 310 0 201 133 0 0 chr20 47265445 47265475 -19402530 + (TG)n Simple_repeat Simple_repeat 2 31 0 233 262 33 0 chr20 47265485 47265546 -19402459 - L2 LINE L2 -658 2656 2594 288 324 9 37 chr20 47265547 47265655 -19402350 - L2 LINE L2 -20 3252 3148 784 148 84 113 chr20 47265659 47265862 -19402143 - MER20 DNA MER1_type -4 215 19 959 172 62 14 chr20 47266825 47267034 -19400971 - MER20 DNA MER1_type 0 219 1 193 191 179 36 chr20 47267123 47267207 -19400798 + MIR3 SINE MIR 100 195 -13 479 133 0 33 chr20 47267239 47267329 -19400676 + AluJ/FRAM SINE Alu 217 303 -9 313 145 16 0 chr20 47267497 47267559 -19400446 + MIR SINE MIR 66 128 -80 204 125 0 0 chr20 47270855 47270887 -19397118 + (T)n Simple_repeat Simple_repeat 1 32 0 194 150 25 0 chr20 47270882 47270922 -19397083 + CT-rich Low_complexity Low_complexity 2 42 0 * 189 0 0 0 chr20 47271406 47271427 -19396578 + (A)n Simple_repeat Simple_repeat 1 21 0 225 94 0 0 chr20 47276864 47276896 -19391109 + (T)n Simple_repeat Simple_repeat 1 32 0 2435 69 3 3 chr20 47280313 47280603 -19387402 + AluSg SINE Alu 2 291 -19 211 320 118 20 chr20 47281008 47281161 -19386844 + MIR3 SINE MIR 3 170 -38 641 172 0 97 chr20 47281260 47281405 -19386600 + FLAM_A SINE Alu 1 131 -2 2168 128 0 3 chr20 47281412 47281710 -19386295 + AluSx SINE Alu 5 301 -11 390 244 0 0 chr20 47282068 47282146 -19385859 - AluJo/FRAM SINE Alu -21 281 204 1394 163 12 33 chr20 47282146 47282386 -19385619 - AluJo SINE Alu -77 235 1 4191 140 122 141 chr20 47282400 47282939 -19385066 - L1MC3 LINE L1 -1 7784 7236 2127 122 6 41 chr20 47282939 47283259 -19384746 + AluSx SINE Alu 1 309 -3 4191 140 122 141 chr20 47283259 47283312 -19384693 - L1MC3 LINE L1 -549 7236 7184 269 306 0 12 chr20 47283312 47283397 -19384608 - MLT1F1 LTR MaLR -442 125 42 4191 140 122 141 chr20 47283397 47283420 -19384585 - L1MC3 LINE L1 -601 7184 7162 1920 127 65 4 chr20 47283420 47283696 -19384309 + AluSx SINE Alu 1 293 -19 4191 140 122 141 chr20 47283696 47283915 -19384090 - L1MC3 LINE L1 -623 7162 6940 1843 171 7 16 chr20 47283915 47284219 -19383786 - AluJo SINE Alu -11 301 1 4191 140 122 141 chr20 47284219 47284341 -19383664 - L1MC3 LINE L1 -845 6940 6817 2167 135 3 6 chr20 47284341 47284653 -19383352 - AluSx SINE Alu -1 311 1 2428 77 0 10 chr20 47284653 47284952 -19383053 - AluSx SINE Alu -13 299 3 4191 140 122 141 chr20 47284952 47285020 -19382985 - L1MC3 LINE L1 -967 6818 6750 2132 115 0 14 chr20 47285020 47285195 -19382810 - AluSg SINE Alu 0 305 134 2588 53 0 0 chr20 47285195 47285495 -19382510 - AluY SINE Alu -11 300 1 2132 115 0 14 chr20 47285495 47285628 -19382377 - AluSg SINE Alu -171 134 1 4191 140 122 141 chr20 47285628 47285668 -19382337 - L1MC3 LINE L1 -1035 6750 6711 2204 136 0 0 chr20 47285668 47285962 -19382043 - AluSx SINE Alu -8 304 11 4191 140 122 141 chr20 47285962 47286188 -19381817 - L1MC3 LINE L1 -1074 6711 6428 346 277 18 9 chr20 47286210 47286322 -19381683 - L1ME3 LINE L1 -41 6121 6009 2038 106 22 51 chr20 47286395 47286707 -19381298 - AluSx SINE Alu -9 303 1 1013 163 0 30 chr20 47286707 47286873 -19381132 - FAM SINE Alu -13 172 12 2058 103 3 24 chr20 47286980 47287271 -19380734 + AluSg SINE Alu 11 295 -15 301 267 194 53 chr20 47287277 47287437 -19380568 + MIR SINE MIR 28 225 -37 2453 61 0 14 chr20 47287437 47287731 -19380274 + AluY SINE Alu 1 290 -21 301 267 194 53 chr20 47287731 47287776 -19380229 + MIR SINE MIR 225 262 0 2567 78 0 0 chr20 47287945 47288252 -19379753 + AluY SINE Alu 1 307 -4 387 248 30 0 chr20 47289564 47289667 -19378338 - MIR SINE MIR -63 145 91 683 167 15 8 chr20 47289699 47289831 -19378174 - AluJb SINE Alu -178 134 2 2113 97 25 0 chr20 47289838 47290147 -19377858 - AluSx SINE Alu 0 316 1 1630 123 10 121 chr20 47291907 47291950 -19376055 - L1MB8 LINE L1 -6 6172 6126 2065 136 3 3 chr20 47291950 47292251 -19375754 - AluJb SINE Alu -9 303 3 1630 123 10 121 chr20 47292251 47292307 -19375698 - L1MB8 LINE L1 -52 6126 6065 2121 98 4 4 chr20 47292307 47292582 -19375423 + AluSx SINE Alu 1 275 -37 198 0 0 0 chr20 47292589 47292611 -19375394 + (TA)n Simple_repeat Simple_repeat 2 23 0 1630 123 10 121 chr20 47292611 47292891 -19375114 - L1MB8 LINE L1 -119 6059 5827 615 179 154 6 chr20 47292905 47293061 -19374944 + Tigger5 DNA MER2_type 47 225 -2098 * 1042 122 72 0 chr20 47293053 47293234 -19374771 + Tigger5 DNA MER2_type 2054 2247 -76 219 69 0 0 chr20 47293234 47293263 -19374742 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1933 112 7 11 chr20 47293285 47293462 -19374543 - AluSx SINE Alu -6 306 129 2403 95 10 0 chr20 47293462 47293768 -19374237 - AluSc SINE Alu 0 309 1 1933 112 7 11 chr20 47293768 47293866 -19374139 - AluSx SINE Alu -183 129 32 831 148 171 136 chr20 47293881 47294145 -19373860 - AluJo SINE Alu -32 280 8 256 233 55 0 chr20 47294153 47294226 -19373779 + Tigger5 DNA MER2_type 2247 2323 0 1040 227 21 0 chr20 47294226 47294464 -19373541 - L1MB8 LINE L1 -355 5829 5587 1863 184 0 0 chr20 47294478 47294787 -19373218 - AluJo SINE Alu -1 311 3 2052 108 0 0 chr20 47294893 47295152 -19372853 - AluSg SINE Alu -17 293 35 1133 69 0 0 chr20 47295164 47295294 -19372711 - AluSg SINE Alu -179 131 2 517 343 178 9 chr20 47295295 47295835 -19372170 + L2 LINE L2 1769 2399 -915 195 244 146 12 chr20 47296306 47296388 -19371617 + L2 LINE L2 3221 3313 0 222 339 119 0 chr20 47296593 47296702 -19371303 + L2 LINE L2 2636 2757 -557 1435 144 8 61 chr20 47296717 47296981 -19371024 + AluJo SINE Alu 5 254 -58 802 210 23 68 chr20 47297454 47297513 -19370492 - MER3 DNA MER1_type 0 209 149 2362 88 3 0 chr20 47297513 47297807 -19370198 + AluSp SINE Alu 1 295 -18 802 210 23 68 chr20 47297807 47297966 -19370039 - MER3 DNA MER1_type -60 149 1 203 207 17 52 chr20 47298374 47298432 -19369573 + L2 LINE L2 3215 3270 -2 2221 92 42 0 chr20 47298459 47298743 -19369262 + AluSx SINE Alu 1 296 -16 1822 157 17 3 chr20 47299115 47299409 -19368596 + AluJb SINE Alu 11 308 -4 2010 144 20 7 chr20 47299547 47299845 -19368160 - AluSx SINE Alu -10 302 1 1294 73 61 0 chr20 47299920 47300085 -19367920 + AluSg SINE Alu 9 183 -127 2054 90 55 48 chr20 47300815 47300959 -19367046 + AluSq SINE Alu 1 143 -170 2125 113 3 7 chr20 47300959 47301278 -19366727 + AluSg SINE Alu 1 310 0 2054 90 55 48 chr20 47301278 47301444 -19366561 + AluSq SINE Alu 143 313 0 401 271 175 59 chr20 47301872 47302012 -19365993 - L2 LINE L2 -41 3272 3150 2295 109 10 0 chr20 47302012 47302314 -19365691 + AluSx SINE Alu 1 305 -7 401 271 175 59 chr20 47302314 47302673 -19365332 - L2 LINE L2 -163 3150 2710 2326 82 13 7 chr20 47302677 47302980 -19365025 - AluSq SINE Alu -6 307 3 2301 98 0 13 chr20 47302993 47303298 -19364707 - AluSc SINE Alu -8 301 1 261 195 122 49 chr20 47303318 47303400 -19364605 - MIR SINE MIR -65 143 56 1456 199 60 14 chr20 47303691 47303973 -19364032 + AluJb SINE Alu 1 295 -17 854 243 77 0 chr20 47304067 47304289 -19363716 - MIR SINE MIR -22 240 2 1819 98 113 7 chr20 47304508 47304782 -19363223 + AluSg1 SINE Alu 1 303 -6 262 314 226 0 chr20 47304982 47305056 -19362949 + MIR SINE MIR 66 122 -140 2181 141 0 0 chr20 47305056 47305360 -19362645 + AluJb SINE Alu 1 304 -8 262 314 226 0 chr20 47305360 47305444 -19362561 + MIR SINE MIR 122 260 -2 1090 122 21 21 chr20 47305703 47305891 -19362114 - MER20 DNA MER1_type 0 219 32 192 273 23 0 chr20 47306021 47306065 -19361940 + MIR SINE MIR 217 261 -1 2125 109 7 23 chr20 47306476 47306780 -19361225 - AluSx SINE Alu -13 299 1 201 231 0 0 chr20 47309159 47309198 -19358807 + GA-rich Low_complexity Low_complexity 2 40 0 634 287 101 21 chr20 47309228 47309465 -19358540 - MIR SINE MIR -5 257 2 229 323 15 0 chr20 47310183 47310248 -19357757 + MIR SINE MIR 5 70 -192 374 241 0 0 chr20 47310251 47310330 -19357675 + MIR SINE MIR 28 106 -156 2351 108 0 7 chr20 47310399 47310706 -19357299 - AluSx SINE Alu -7 305 1 2445 95 0 0 chr20 47310870 47311166 -19356839 - AluSg SINE Alu -14 296 1 234 211 53 0 chr20 47312335 47312392 -19355613 - MIR SINE MIR -60 148 89 647 169 42 0 chr20 47312575 47312693 -19355312 - MER5A DNA MER1_type -1 188 66 2094 147 0 0 chr20 47312693 47313000 -19355005 - AluSx SINE Alu -5 307 1 2267 115 0 3 chr20 47313262 47313567 -19354438 - AluSx SINE Alu -8 304 1 2535 62 0 10 chr20 47313570 47313876 -19354129 - AluY SINE Alu -8 303 1 362 80 4 4 chr20 47313882 47313947 -19354058 - AluJb SINE Alu -165 137 89 21 0 0 0 chr20 47313955 47313976 -19354029 + AT_rich Low_complexity Low_complexity 1 21 0 721 224 58 0 chr20 47313976 47314132 -19353873 - FRAM SINE Alu -1 165 1 239 274 113 42 chr20 47314133 47314301 -19353704 - L1MC/D LINE L1 -2024 5784 5605 1619 112 0 18 chr20 47314409 47314633 -19353372 - AluSg/x SINE Alu -12 300 81 1701 110 0 17 chr20 47315329 47315566 -19352439 - AluSg/x SINE Alu -13 297 65 241 288 130 20 chr20 47315594 47315740 -19352265 + L1MC/D LINE L1 5605 5766 -2042 757 109 0 9 chr20 47315779 47315889 -19352116 - AluSq/x SINE Alu -204 109 1 615 277 94 68 chr20 47316058 47316409 -19351596 - Charlie8 DNA MER1_type -1895 522 155 2118 120 34 0 chr20 47316409 47316701 -19351304 - AluSg SINE Alu -8 302 1 615 277 94 68 chr20 47316701 47316819 -19351186 - Charlie8 DNA MER1_type -2262 155 41 363 257 88 9 chr20 47317517 47317610 -19350395 + MIR3 SINE MIR 56 161 -47 2406 77 0 10 chr20 47317610 47317907 -19350098 + AluSc SINE Alu 1 294 -15 363 257 88 9 chr20 47317907 47317926 -19350079 + MIR3 SINE MIR 161 177 -31 437 175 88 44 chr20 47318455 47318569 -19349436 + MIR SINE MIR 57 175 -87 2298 103 0 7 chr20 47318696 47318997 -19349008 + AluSx SINE Alu 1 299 -13 366 155 42 0 chr20 47319003 47319074 -19348931 + Charlie5 DNA MER1_type 8 81 -2531 2248 109 0 10 chr20 47319075 47319379 -19348626 - AluSg SINE Alu -9 301 1 1611 127 4 0 chr20 47319379 47319608 -19348397 - AluSq SINE Alu -20 293 64 448 167 143 0 chr20 47319634 47319718 -19348287 - FLAM_A SINE Alu -18 124 29 2180 102 0 24 chr20 47319732 47320048 -19347957 - AluSq SINE Alu 0 309 1 727 137 65 33 chr20 47320052 47320205 -19347800 - MLT1A1 LTR MaLR -207 158 1 297 156 39 39 chr20 47320218 47320295 -19347710 + Charlie8 DNA MER1_type 189 265 -2152 1071 114 0 0 chr20 47320503 47320643 -19347362 + AluSg/x SINE Alu 156 295 -15 1731 147 0 88 chr20 47320771 47321111 -19346894 - AluJb SINE Alu -2 310 1 2235 112 20 0 chr20 47321678 47321973 -19346032 + AluSx SINE Alu 3 303 -9 1536 187 18 21 chr20 47321973 47322256 -19345749 - AluJo SINE Alu -30 282 1 1038 204 22 27 chr20 47322697 47322922 -19345083 + MER58A DNA MER1_type 1 224 0 1961 94 84 4 chr20 47323506 47323781 -19344224 - AluSx SINE Alu -15 297 1 780 220 53 43 chr20 47324113 47324322 -19343683 + MER20 DNA MER1_type 2 212 -7 1296 85 188 82 chr20 47324627 47324753 -19343252 - MER46B DNA MER2_type -2497 234 123 1877 115 74 0 chr20 47324753 47325022 -19342983 - AluSx SINE Alu -23 289 1 1296 85 188 82 chr20 47325022 47325055 -19342950 - MER46B DNA MER2_type -2608 123 95 2739 80 19 19 chr20 47325055 47325430 -19342575 - THE1C LTR MaLR 0 375 1 1296 85 188 82 chr20 47325430 47325588 -19342417 - MER46B DNA MER2_type -2636 95 7 2335 99 0 3 chr20 47325761 47326064 -19341941 + AluSq SINE Alu 1 302 -11 1417 131 0 32 chr20 47326228 47326281 -19341724 + AluJb SINE Alu 84 137 -175 459 0 0 0 chr20 47326281 47326332 -19341673 + (CA)n Simple_repeat Simple_repeat 2 52 0 1417 131 0 32 chr20 47326332 47326499 -19341506 + AluJb SINE Alu 137 297 -15 282 200 0 18 chr20 47326920 47326975 -19341030 - MIR SINE MIR -133 129 76 2503 77 0 10 chr20 47327335 47327648 -19340357 + AluSg SINE Alu 1 310 0 632 245 38 25 chr20 47327828 47327987 -19340018 - MIR SINE MIR -58 204 44 678 294 128 40 chr20 47328943 47329317 -19338688 - L2 LINE L2 -1 3312 2906 1853 175 0 10 chr20 47329492 47329795 -19338210 + AluJo SINE Alu 1 300 -12 309 236 102 24 chr20 47329817 47329944 -19338061 + L1MC4a LINE L1 5819 5955 -1853 1941 164 3 0 chr20 47330245 47330543 -19337462 - AluJo SINE Alu -13 299 1 1981 136 3 26 chr20 47331792 47332102 -19335903 - AluJb SINE Alu -5 307 5 1723 136 64 75 chr20 47332768 47332833 -19335172 - THE1C LTR MaLR -3 372 308 1966 113 3 18 chr20 47332833 47333144 -19334861 - AluSx SINE Alu 0 314 8 1723 136 64 75 chr20 47333144 47333453 -19334552 - THE1C LTR MaLR -67 308 1 265 296 14 0 chr20 47333814 47333885 -19334120 + MER91B DNA MER1_type 59 130 -60 914 140 6 0 chr20 47333963 47334142 -19333863 + CT-rich Low_complexity Low_complexity 1 180 0 1754 152 27 37 chr20 47334150 47334447 -19333558 - AluJo SINE Alu -18 294 1 276 305 49 12 chr20 47334447 47334529 -19333476 + MER91B DNA MER1_type 105 189 -1 383 308 49 38 chr20 47336091 47336276 -19331729 + MIR SINE MIR 6 192 -70 2500 81 3 0 chr20 47336326 47336633 -19331372 + AluSp SINE Alu 1 308 -5 2352 242 53 18 chr20 47337266 47338080 -19329925 - L1ME2 LINE L1 -2 6162 5321 2043 126 0 0 chr20 47338092 47338392 -19329613 - AluSx SINE Alu 0 305 6 2287 112 3 3 chr20 47338524 47338827 -19329178 + AluSx SINE Alu 1 303 -9 256 304 36 29 chr20 47339039 47339177 -19328828 - Charlie8 DNA MER1_type -2242 175 37 270 81 0 0 chr20 47339342 47339379 -19328626 + (TG)n Simple_repeat Simple_repeat 2 38 0 916 135 0 0 chr20 47339381 47339507 -19328498 - FLAM_C SINE Alu -7 126 1 248 0 31 0 chr20 47340666 47340703 -19327302 + (TAGA)n Simple_repeat Simple_repeat 1 71 0 248 0 31 0 chr20 47340703 47340735 -19327270 + (TAGA)n Simple_repeat Simple_repeat 2 34 0 2131 133 3 7 chr20 47340738 47341039 -19326966 + AluSx SINE Alu 1 300 -12 849 172 0 0 chr20 47341174 47341308 -19326697 - AluJo SINE Alu -178 134 1 285 284 142 36 chr20 47341324 47341599 -19326406 - L1ME4a LINE L1 -213 5908 5605 225 139 0 0 chr20 47341716 47341752 -19326253 - L1P5 LINE L1 -705 5446 5411 723 265 143 9 chr20 47341995 47342218 -19325787 + MIR SINE MIR 3 255 -7 599 307 69 13 chr20 47342224 47342455 -19325550 - MIR SINE MIR -16 246 3 209 336 23 8 chr20 47342588 47342716 -19325289 - L2 LINE L2 -417 2897 2768 441 223 204 19 chr20 47342720 47342877 -19325128 - MER20 DNA MER1_type -4 215 30 619 237 25 68 chr20 47342913 47342994 -19325011 - L2 LINE L2 -547 2767 2684 2068 146 0 0 chr20 47342994 47343288 -19324717 + AluSx SINE Alu 1 294 -18 619 237 25 68 chr20 47343288 47343442 -19324563 - L2 LINE L2 -630 2684 2542 233 329 26 0 chr20 47344387 47344463 -19323542 - MIR SINE MIR -89 119 42 2298 112 3 0 chr20 47344467 47344772 -19323233 - AluSx SINE Alu -4 308 3 242 310 155 17 chr20 47346093 47346209 -19321796 - L2 LINE L2 0 3272 3141 1866 163 3 10 chr20 47347070 47347376 -19320629 - AluSx SINE Alu -8 304 1 255 303 134 0 chr20 47347514 47347612 -19320393 - MIR SINE MIR -66 142 55 25 0 0 0 chr20 47347703 47347728 -19320277 + AT_rich Low_complexity Low_complexity 1 25 0 1538 139 117 11 chr20 47347756 47348029 -19319976 - AluSg1 SINE Alu -7 302 1 323 283 24 54 chr20 47348675 47348880 -19319125 + Charlie8 DNA MER1_type 79 277 -2140 1654 186 3 35 chr20 47348934 47349246 -19318759 + AluJo SINE Alu 1 302 -10 2049 147 7 7 chr20 47349246 47349590 -19318415 + AluSg SINE Alu 1 310 0 23 0 0 0 chr20 47350287 47350310 -19317695 + AT_rich Low_complexity Low_complexity 1 23 0 1737 175 0 46 chr20 47351308 47351634 -19316371 + AluJb SINE Alu 1 311 -1 2285 103 0 7 chr20 47351707 47352007 -19315998 - AluSx SINE Alu -14 298 1 216 135 0 0 chr20 47352198 47352235 -19315770 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 259 253 81 30 chr20 47353337 47353436 -19314569 - MER58B DNA MER1_type -14 327 224 837 183 0 0 chr20 47353441 47353572 -19314433 + FRAM SINE Alu 22 152 -24 1891 141 0 0 chr20 47353657 47353919 -19314086 - AluSx SINE Alu -16 296 35 542 238 55 24 chr20 47353923 47354087 -19313918 - MER58B DNA MER1_type -171 170 2 2454 82 0 0 chr20 47354842 47355134 -19312871 + AluY SINE Alu 3 294 -17 2285 84 0 7 chr20 47355234 47355520 -19312485 + AluSx SINE Alu 1 284 -28 2591 65 0 0 chr20 47356115 47356421 -19311584 - AluY SINE Alu -5 306 1 972 127 0 8 chr20 47356503 47356637 -19311368 - FLAM_A SINE Alu 0 133 1 27 29 0 0 chr20 47356789 47356823 -19311182 + AT_rich Low_complexity Low_complexity 1 34 0 1050 108 0 0 chr20 47356824 47356963 -19311042 - AluSp/q SINE Alu -11 302 164 1686 195 24 3 chr20 47356963 47357255 -19310750 - AluJo SINE Alu -14 298 1 526 190 99 0 chr20 47357821 47357942 -19310063 - MER20 DNA MER1_type -5 214 82 2240 123 7 0 chr20 47357988 47358298 -19309707 - AluSx SINE Alu 0 312 1 1770 136 22 63 chr20 47358421 47358624 -19309381 - AluSx SINE Alu -8 304 117 2591 60 0 0 chr20 47358624 47358926 -19309079 + AluY SINE Alu 1 302 -9 1770 136 22 63 chr20 47358926 47359039 -19308966 - AluSx SINE Alu -195 117 1 296 319 76 42 chr20 47359225 47359680 -19308325 - L2 LINE L2 -206 3107 2593 21 0 0 0 chr20 47359709 47359730 -19308275 + GC_rich Low_complexity Low_complexity 1 21 0 2341 174 42 50 chr20 47359782 47360327 -19307678 - L1MB5 LINE L1 -6 6168 5628 436 170 116 54 chr20 47360328 47360372 -19307633 - MER106A DNA MER1_type -80 156 116 181 0 69 0 chr20 47360372 47360401 -19307604 + (CA)n Simple_repeat Simple_repeat 2 32 0 436 170 116 54 chr20 47360401 47360503 -19307502 - MER106A DNA MER1_type -120 116 1 245 308 15 39 chr20 47360503 47360633 -19307372 - L2 LINE L2 -729 2585 2459 2116 104 0 14 chr20 47360633 47360920 -19307085 + AluSq SINE Alu 1 283 -30 186 244 35 23 chr20 47360951 47361037 -19306968 - L2 LINE L2 -849 2465 2379 2157 119 0 7 chr20 47361474 47361787 -19306218 + AluSx SINE Alu 1 311 0 204 40 0 0 chr20 47362148 47362173 -19305832 + (TA)n Simple_repeat Simple_repeat 1 25 0 2076 128 0 7 chr20 47362173 47362463 -19305542 - AluJb SINE Alu -23 289 2 2156 138 0 0 chr20 47362640 47362944 -19305061 + AluSx SINE Alu 1 304 -8 758 253 61 0 chr20 47363094 47363292 -19304713 - MER20 DNA MER1_type -9 210 1 594 219 77 113 chr20 47363352 47363599 -19304406 - MIR SINE MIR -2 260 23 2140 126 3 0 chr20 47365133 47365427 -19302578 - AluSq SINE Alu -18 295 1 405 0 0 0 chr20 47365621 47365666 -19302339 + (ATG)n Simple_repeat Simple_repeat 2 46 0 1687 148 34 38 chr20 47365671 47365962 -19302043 - AluJo SINE Alu -22 290 1 2275 103 7 3 chr20 47365975 47366277 -19301728 - AluSp SINE Alu -10 303 1 726 264 116 103 chr20 47366299 47366938 -19301067 - L2 LINE L2 0 3313 2668 665 193 41 47 chr20 47366955 47367126 -19300879 + MER20 DNA MER1_type 7 176 -43 338 329 31 12 chr20 47367170 47367331 -19300674 - L2 LINE L2 -942 2372 2209 426 189 38 38 chr20 47367361 47367467 -19300538 + MER20 DNA MER1_type 80 185 -34 215 317 50 8 chr20 47367549 47367669 -19300336 - L2 LINE L2 -1236 2078 1954 249 276 73 57 chr20 47367708 47367831 -19300174 - MIR3 SINE MIR -47 161 37 743 274 37 0 chr20 47368577 47368822 -19299183 + L1ME1 LINE L1 5910 6163 -3 489 244 70 19 chr20 47368822 47368978 -19299027 - MIR SINE MIR -82 180 17 270 257 14 0 chr20 47369102 47369176 -19298829 - Charlie8 DNA MER1_type -2266 151 77 1073 169 6 6 chr20 47369181 47369359 -19298646 + AluJo SINE Alu 123 300 -12 314 158 19 57 chr20 47369512 47369670 -19298335 + (TATATG)n Simple_repeat Simple_repeat 6 157 0 199 234 26 0 chr20 47369681 47369758 -19298247 + (TG)n Simple_repeat Simple_repeat 1 79 0 206 241 37 0 chr20 47369848 47369956 -19298049 + (TG)n Simple_repeat Simple_repeat 1 112 0 2472 59 0 3 chr20 47370591 47370879 -19297126 - AluY SINE Alu -24 287 1 923 117 0 0 chr20 47370899 47371019 -19296986 - FLAM_C SINE Alu -23 120 1 1759 109 4 0 chr20 47371131 47371361 -19296644 - AluSq SINE Alu -18 295 65 419 231 0 22 chr20 47371403 47371494 -19296511 - L1MC4 LINE L1 -1339 6703 6615 408 295 11 7 chr20 47371415 47371561 -19296444 + L1MC4 LINE L1 6614 6724 -1318 * 382 122 14 72 chr20 47371561 47371621 -19296384 + (TATATG)n Simple_repeat Simple_repeat 2 64 -68 306 0 0 0 chr20 47371621 47371655 -19296350 + (CA)n Simple_repeat Simple_repeat 2 35 0 382 122 14 72 chr20 47371655 47371733 -19296272 + (TATATG)n Simple_repeat Simple_repeat 64 132 0 407 111 0 0 chr20 47371735 47371789 -19296216 - AluSq SINE Alu -257 55 2 934 114 18 123 chr20 47372032 47372071 -19295934 + MER20 DNA MER1_type 24 65 -154 1721 113 76 60 chr20 47372071 47372372 -19295633 - AluSx SINE Alu -6 306 1 934 114 18 123 chr20 47372372 47372551 -19295454 + MER20 DNA MER1_type 65 219 0 714 291 74 16 chr20 47372656 47372979 -19295026 - L1MC4 LINE L1 -1959 5849 5508 676 221 0 128 chr20 47373602 47373662 -19294343 + MER5B DNA MER1_type 1 67 -111 2185 133 0 0 chr20 47373662 47373962 -19294043 - AluSx SINE Alu -12 300 1 676 221 0 128 chr20 47373962 47374105 -19293900 + MER5B DNA MER1_type 67 178 0 779 168 153 58 chr20 47374130 47374282 -19293723 + MER58A DNA MER1_type 16 191 -2229 1909 156 10 0 chr20 47374282 47374577 -19293428 - AluSx SINE Alu -14 298 1 779 168 153 58 chr20 47374577 47374614 -19293391 + MER58A DNA MER1_type 191 223 -1 2220 106 10 0 chr20 47374902 47375203 -19292802 - AluSx SINE Alu -7 305 2 25 31 0 0 chr20 47375223 47375255 -19292750 + AT_rich Low_complexity Low_complexity 1 32 0 793 154 0 34 chr20 47375343 47375492 -19292513 - SVA Other Other -709 677 534 2011 127 24 3 chr20 47375619 47375910 -19292095 - AluJo SINE Alu -15 297 1 964 154 6 25 chr20 47376173 47376335 -19291670 - FRAM SINE Alu -18 158 1 482 289 147 35 chr20 47378301 47378668 -19289337 + L2 LINE L2 2865 3272 0 576 294 147 15 chr20 47378960 47379164 -19288841 - MIR SINE MIR -12 250 20 652 198 0 0 chr20 47379280 47379386 -19288619 - FLAM_A SINE Alu -36 106 1 489 277 64 88 chr20 47379691 47380156 -19287849 - Charlie8 DNA MER1_type -2131 286 1 347 298 94 23 chr20 47380229 47380400 -19287605 + MIR3 SINE MIR 20 202 -6 199 321 64 37 chr20 47381341 47381450 -19286555 - MIR SINE MIR -141 121 10 2201 107 3 0 chr20 47381671 47381962 -19286043 + AluSx SINE Alu 1 292 -20 2229 107 0 0 chr20 47382161 47382442 -19285563 - AluSq SINE Alu -32 281 1 612 215 111 17 chr20 47382479 47382651 -19285354 - MER20 DNA MER1_type 0 219 32 2592 68 0 0 chr20 47385100 47385408 -19282597 + AluY SINE Alu 1 308 -3 2520 73 0 3 chr20 47385902 47386203 -19281802 - AluSg SINE Alu -10 300 1 450 214 154 26 chr20 47386244 47386361 -19281644 + FLAM_A SINE Alu 1 132 -1 2058 133 0 3 chr20 47386363 47386663 -19281342 + AluSg SINE Alu 1 299 -11 2216 121 3 0 chr20 47386677 47386984 -19281021 - AluSx SINE Alu -4 308 1 1803 97 101 22 chr20 47386995 47387262 -19280743 - AluSx SINE Alu -24 288 1 282 106 0 0 chr20 47388364 47388411 -19279594 + (CAG)n Simple_repeat Simple_repeat 3 49 0 224 157 39 0 chr20 47388808 47388859 -19279146 + (TATG)n Simple_repeat Simple_repeat 4 56 0 654 253 85 25 chr20 47388905 47389152 -19278853 - L1MC4a LINE L1 -217 5947 5666 1870 127 19 55 chr20 47389759 47390066 -19277939 + AluSx SINE Alu 1 296 -16 1433 184 39 3 chr20 47390121 47390585 -19277420 - MER67A LTR ERV1 -25 518 1 2355 94 0 7 chr20 47391496 47391794 -19276211 - AluSx SINE Alu -16 296 1 509 219 76 9 chr20 47391920 47392025 -19275980 + L2 LINE L2 3188 3299 -14 818 147 0 52 chr20 47392223 47392359 -19275646 - FLAM_C SINE Alu -4 129 1 1819 228 132 31 chr20 47392530 47392868 -19275137 - MLT1E LTR MaLR 0 593 180 1918 137 11 3 chr20 47392868 47393152 -19274853 + AluSx SINE Alu 1 286 -26 1819 228 132 31 chr20 47393152 47393352 -19274653 - MLT1E LTR MaLR -413 180 1 891 301 9 9 chr20 47393374 47393600 -19274405 - MIR SINE MIR -21 241 16 1881 153 4 4 chr20 47393730 47394010 -19273995 + AluJo SINE Alu 23 302 -10 2242 121 0 9 chr20 47394010 47394325 -19273680 + AluSx SINE Alu 1 312 0 386 234 28 0 chr20 47394340 47394447 -19273558 + MER113 DNA MER1_type? 323 432 -89 540 162 38 9 chr20 47394679 47394784 -19273221 - FLAM_A SINE Alu -14 128 21 280 0 0 0 chr20 47394816 47394847 -19273158 + (TTTA)n Simple_repeat Simple_repeat 2 164 0 1823 143 29 11 chr20 47394847 47395127 -19272878 - AluSq SINE Alu -28 285 1 207 303 76 30 chr20 47395701 47395833 -19272172 - MIR SINE MIR -14 248 111 1232 192 130 37 chr20 47396188 47396542 -19271463 + L1MB8 LINE L1 5782 6168 -10 2072 118 47 10 chr20 47396634 47396930 -19271075 + AluSx SINE Alu 1 307 -5 721 178 61 121 chr20 47397090 47397321 -19270684 - MER20 DNA MER1_type -2 217 1 1440 171 78 8 chr20 47397961 47398219 -19269786 + AluJo SINE Alu 25 300 -12 312 195 91 13 chr20 47398725 47398802 -19269203 - MER46C DNA MER2_type 0 338 256 672 189 178 31 chr20 47398874 47399065 -19268940 - MER20 DNA MER1_type 0 219 1 24 0 0 0 chr20 47399081 47399105 -19268900 + AT_rich Low_complexity Low_complexity 1 24 0 2271 114 3 0 chr20 47399105 47399404 -19268601 - AluSx SINE Alu -12 300 1 1426 170 0 9 chr20 47400256 47400485 -19267520 + AluJb SINE Alu 1 227 -85 217 286 127 0 chr20 47400583 47400646 -19267359 - MIR SINE MIR -114 148 78 2123 147 3 0 chr20 47401044 47401350 -19266655 - AluSq SINE Alu -6 307 1 890 103 0 14 chr20 47401605 47401751 -19266254 + (TCCCC)n Simple_repeat Simple_repeat 2 145 0 2115 110 29 0 chr20 47401757 47402029 -19265976 - AluSq SINE Alu -33 280 1 625 229 7 21 chr20 47402235 47402379 -19265626 + MIR SINE MIR 111 252 -10 194 195 205 5 chr20 47402582 47402679 -19265326 - MIR SINE MIR -68 140 37 655 221 43 44 chr20 47403326 47403458 -19264547 - MER113 DNA MER1_type? -146 375 244 2394 98 0 3 chr20 47403458 47403764 -19264241 - AluSp SINE Alu -7 306 2 655 221 43 44 chr20 47403764 47403783 -19264222 - MER113 DNA MER1_type? -277 244 226 2151 126 3 0 chr20 47403783 47404084 -19263921 - AluSq SINE Alu -11 302 1 655 221 43 44 chr20 47404084 47404267 -19263738 - MER113 DNA MER1_type? -295 226 5 749 214 14 0 chr20 47404272 47404417 -19263588 - MER58B DNA MER1_type 0 341 195 21 0 0 0 chr20 47404497 47404518 -19263487 + AT_rich Low_complexity Low_complexity 1 21 0 2403 84 0 3 chr20 47404746 47405054 -19262951 - AluY SINE Alu -4 307 1 2095 127 3 3 chr20 47405343 47405626 -19262379 + AluSx SINE Alu 1 283 -29 1146 180 10 0 chr20 47406222 47406428 -19261577 + MER3 DNA MER1_type 2 209 0 2031 105 7 34 chr20 47407771 47407954 -19260051 - AluSx SINE Alu -15 297 123 2526 80 0 0 chr20 47407954 47408255 -19259750 + AluSg SINE Alu 1 301 -9 2031 105 7 34 chr20 47408255 47408367 -19259638 - AluSx SINE Alu -189 123 10 653 271 149 29 chr20 47408545 47408962 -19259043 - MER113 DNA MER1_type? -54 467 1 973 207 89 0 chr20 47409157 47409360 -19258645 - MER58A DNA MER1_type -3 221 1 402 289 55 0 chr20 47409591 47409719 -19258286 - MIR SINE MIR -110 152 18 459 274 149 0 chr20 47409760 47409928 -19258077 - MER113 DNA MER1_type? -39 482 290 337 320 89 41 chr20 47410130 47410399 -19257606 + L2 LINE L2 958 1239 -2075 2321 101 3 7 chr20 47410480 47410786 -19257219 - AluSx SINE Alu -7 305 1 2258 125 3 6 chr20 47410792 47411103 -19256902 - AluSx SINE Alu -2 310 1 740 192 0 7 chr20 47411412 47411558 -19256447 + MER3 DNA MER1_type 9 153 -56 848 139 73 13 chr20 47411657 47411808 -19256197 + FAM SINE Alu 16 175 -10 2050 126 3 3 chr20 47411940 47412225 -19255780 - AluSx SINE Alu -27 285 1 656 210 0 25 chr20 47412260 47412379 -19255626 - FLAM_A SINE Alu -17 116 1 2122 138 0 3 chr20 47412521 47412812 -19255193 + AluSx SINE Alu 1 290 -22 321 233 68 38 chr20 47413422 47413555 -19254450 - HAL1 LINE L1 -142 2365 2229 227 234 0 0 chr20 47413735 47413782 -19254223 - HAL1b LINE L1 -556 792 746 242 245 50 43 chr20 47413842 47413981 -19254024 - HAL1 LINE L1 -369 2138 1999 230 85 0 64 chr20 47416856 47416903 -19251102 + (A)n Simple_repeat Simple_repeat 1 44 0 325 302 21 10 chr20 47418615 47418711 -19249294 - L2 LINE L2 -39 3274 3178 233 362 39 0 chr20 47418723 47418850 -19249155 - L2 LINE L2 -14 3258 3127 1859 143 14 10 chr20 47418861 47419155 -19248850 - AluSx SINE Alu -15 297 3 1703 113 28 8 chr20 47419164 47419411 -19248594 - AluSx SINE Alu -22 290 39 2362 86 14 0 chr20 47419414 47419706 -19248299 - AluSp SINE Alu -17 296 1 251 177 62 104 chr20 47420019 47420115 -19247890 + L2 LINE L2 3175 3266 -47 2256 132 0 0 chr20 47420488 47420798 -19247207 - AluSx SINE Alu -2 310 1 271 354 10 40 chr20 47420855 47421053 -19246952 - L1MC/D LINE L1 -1920 5888 5697 426 285 198 30 chr20 47421533 47421796 -19246209 - L2 LINE L2 -5 3308 3002 1800 176 0 3 chr20 47421821 47422123 -19245882 - AluJb SINE Alu -8 304 4 841 108 0 0 chr20 47422127 47422238 -19245767 - AluSx SINE Alu -8 302 192 1077 100 7 0 chr20 47422239 47422379 -19245626 - AluSx SINE Alu -172 141 1 502 327 18 22 chr20 47422575 47422798 -19245207 - MIR SINE MIR -39 223 2 743 228 19 0 chr20 47422948 47423110 -19244895 - LTR67 LTR ERVL -7 550 386 2197 124 0 3 chr20 47423134 47423433 -19244572 + AluSx SINE Alu 1 298 -14 1927 119 81 39 chr20 47423641 47424001 -19244004 - THE1C LTR MaLR 0 375 1 469 224 132 13 chr20 47424033 47424185 -19243820 - LTR67 LTR ERVL -377 180 11 1024 274 52 3 chr20 47424280 47424587 -19243418 + MLT2E LTR ERVL 1 322 -306 312 197 14 0 chr20 47424643 47424714 -19243291 + MLT2E LTR ERVL 494 565 -63 2268 116 3 0 chr20 47424776 47425086 -19242919 + AluSx SINE Alu 1 311 -1 1982 157 0 3 chr20 47425380 47425680 -19242325 - AluSx SINE Alu -13 299 1 231 234 170 11 chr20 47426021 47426115 -19241890 - MIR SINE MIR -61 147 39 2430 83 7 0 chr20 47426132 47426433 -19241572 - AluSq SINE Alu -10 303 1 283 325 0 0 chr20 47426508 47426585 -19241420 - L2 LINE L2 -15 3298 3222 2318 101 3 19 chr20 47426715 47426831 -19241174 + AluSq SINE Alu 1 117 -196 4391 52 9 12 chr20 47426831 47427391 -19240614 - LTR6B LTR ERV1 0 558 1 2318 101 3 19 chr20 47427391 47427592 -19240413 + AluSq SINE Alu 117 313 0 1853 126 6 83 chr20 47427624 47427950 -19240055 - AluJo SINE Alu -4 308 8 315 244 129 118 chr20 47427961 47428119 -19239886 - Charlie8 DNA MER1_type -65 276 270 2329 114 0 9 chr20 47428119 47428434 -19239571 + AluSx SINE Alu 1 312 0 315 244 129 118 chr20 47428434 47428674 -19239331 - Charlie8 DNA MER1_type -71 270 34 348 275 18 9 chr20 47428685 47428794 -19239211 + MIR SINE MIR 37 146 -62 213 231 0 19 chr20 47428979 47429031 -19238974 + (CATA)n Simple_repeat Simple_repeat 2 52 0 2310 104 0 0 chr20 47429229 47429526 -19238479 + AluSx SINE Alu 1 297 -15 2033 95 0 11 chr20 47429559 47429821 -19238184 - AluSx SINE Alu -10 302 44 735 183 24 67 chr20 47429821 47429985 -19238020 - FRAM SINE Alu -9 157 1 1844 128 44 7 chr20 47430071 47430344 -19237661 + AluJb SINE Alu 1 283 -29 219 36 0 0 chr20 47430344 47430372 -19237633 + (CCAA)n Simple_repeat Simple_repeat 2 29 0 782 263 97 22 chr20 47430890 47431209 -19236796 + L1ME3 LINE L1 5820 6162 0 392 276 161 61 chr20 47431244 47431625 -19236380 + L2 LINE L2 2643 3041 -272 199 341 24 24 chr20 47432194 47432279 -19235726 + L2 LINE L2 3158 3242 -30 425 273 131 45 chr20 47432298 47432433 -19235572 + L1MC4a LINE L1 5853 6012 -1796 2286 103 0 3 chr20 47432433 47432724 -19235281 + AluSx SINE Alu 1 290 -22 425 273 131 45 chr20 47432724 47432786 -19235219 + L1MC4a LINE L1 6012 6067 -1741 956 143 0 0 chr20 47433130 47433270 -19234735 + FLAM_C SINE Alu 1 140 -3 281 243 118 88 chr20 47433321 47433422 -19234583 - L1MC/D LINE L1 -2302 5506 5409 1924 169 0 3 chr20 47433422 47433718 -19234287 - AluJb SINE Alu -11 301 7 1832 150 10 22 chr20 47433723 47434036 -19233969 - AluJo SINE Alu -3 309 1 281 243 118 88 chr20 47434036 47434064 -19233941 - L1MC/D LINE L1 -2402 5406 5367 1072 183 0 6 chr20 47434064 47434239 -19233766 + FRAM SINE Alu 1 168 -8 2390 102 10 0 chr20 47434349 47434654 -19233351 + AluSx SINE Alu 1 308 -4 2566 70 0 6 chr20 47434654 47434967 -19233038 + AluY SINE Alu 1 311 0 414 333 25 20 chr20 47435196 47435400 -19232605 + MLT1K LTR MaLR 373 577 -11 978 136 9 9 chr20 47435668 47435897 -19232108 + (TCCA)n Simple_repeat Simple_repeat 1 229 0 338 302 43 9 chr20 47435907 47436023 -19231982 - L2 LINE L2 0 3272 3153 380 314 0 7 chr20 47436709 47436849 -19231156 + (TCCA)n Simple_repeat Simple_repeat 4 142 0 415 320 17 6 chr20 47436882 47437054 -19230951 + (TCCA)n Simple_repeat Simple_repeat 1 174 0 348 288 56 24 chr20 47437151 47437276 -19230729 - L2 LINE L2 -2 3270 3142 2082 149 3 0 chr20 47437299 47437600 -19230405 - AluJb SINE Alu -10 302 1 266 296 113 13 chr20 47438053 47438212 -19229793 + MLT1K LTR MaLR 227 401 -187 222 222 0 0 chr20 47438285 47438339 -19229666 + CT-rich Low_complexity Low_complexity 2 55 0 528 157 0 0 chr20 47439613 47439696 -19228309 + AluJ/FLAM SINE Alu 3 85 -227 520 270 89 28 chr20 47439703 47439937 -19228068 - MER113 DNA MER1_type? -125 396 145 1987 135 69 0 chr20 47439937 47440226 -19227779 - AluJb SINE Alu -3 309 1 520 270 89 28 chr20 47440226 47440239 -19227766 - MER113 DNA MER1_type? -376 145 134 704 174 53 8 chr20 47440243 47440375 -19227630 - FRAM SINE Alu -12 164 27 2400 107 3 0 chr20 47440654 47440964 -19227041 + AluSq SINE Alu 1 311 -2 471 235 193 38 chr20 47441099 47441363 -19226642 - L2 LINE L2 -102 3211 2907 320 287 119 0 chr20 47441335 47441436 -19226569 + L2 LINE L2 3200 3312 -1 * 2431 105 0 3 chr20 47441711 47442024 -19225981 + AluSx SINE Alu 1 312 0 441 199 15 107 chr20 47442519 47442603 -19225402 + MIR SINE MIR 71 140 -122 1607 203 3 20 chr20 47442603 47442899 -19225106 + AluJb SINE Alu 14 304 -8 441 199 15 107 chr20 47442899 47442945 -19225060 + MIR SINE MIR 140 189 -73 370 260 19 0 chr20 47443050 47443154 -19224851 + MLT1J LTR MaLR 12 117 -394 195 195 0 0 chr20 47443158 47443199 -19224806 - L2 LINE L2 -338 2976 2936 184 296 19 19 chr20 47443899 47443953 -19224052 + L2 LINE L2 446 499 -2815 469 267 79 12 chr20 47444131 47444296 -19223709 - MIR SINE MIR -63 199 24 289 185 0 0 chr20 47444313 47444367 -19223638 + L1MB3 LINE L1 6071 6124 -59 2095 137 0 3 chr20 47444367 47444659 -19223346 - AluSx SINE Alu -21 291 1 2171 120 0 3 chr20 47444668 47444967 -19223038 - AluSq SINE Alu -15 298 1 2267 114 3 0 chr20 47444998 47445295 -19222710 + AluSq SINE Alu 1 298 -15 232 80 20 40 chr20 47445295 47445345 -19222660 + L1MB3 LINE L1 6133 6181 -2 28 0 0 0 chr20 47445570 47445598 -19222407 + AT_rich Low_complexity Low_complexity 1 28 0 773 168 8 0 chr20 47445645 47445770 -19222235 + FRAM SINE Alu 5 130 -46 504 254 84 56 chr20 47445777 47446161 -19221844 + MLT1J2 LTR MaLR 55 446 0 2276 103 7 0 chr20 47446982 47447274 -19220731 + AluSx SINE Alu 1 294 -18 906 152 0 37 chr20 47447693 47447931 -19220074 + (TCCA)n Simple_repeat Simple_repeat 1 229 0 809 171 0 17 chr20 47447908 47448089 -19219916 + (CCCA)n Simple_repeat Simple_repeat 2 179 0 * 305 333 67 7 chr20 47448100 47448250 -19219755 - L2 LINE L2 0 3313 3155 * 417 261 124 7 chr20 47448244 47448397 -19219608 - MIR SINE MIR 0 262 92 584 188 8 0 chr20 47448418 47448546 -19219459 + (CCCA)n Simple_repeat Simple_repeat 3 131 0 339 333 0 9 chr20 47448558 47448672 -19219333 - L2 LINE L2 0 3272 3160 633 298 83 75 chr20 47448759 47448956 -19219049 + L2 LINE L2 2807 3001 -312 1931 153 10 26 chr20 47448956 47449264 -19218741 - AluJo SINE Alu -9 303 1 633 298 83 75 chr20 47449264 47449569 -19218436 + L2 LINE L2 3001 3313 0 365 327 31 19 chr20 47449633 47449795 -19218210 + L2 LINE L2 2788 2951 -363 1859 153 4 0 chr20 47449901 47450202 -19217803 + AluJo SINE Alu 1 302 0 335 208 46 77 chr20 47450204 47450215 -19217790 + MLT1J LTR MaLR 342 352 -159 2388 91 0 19 chr20 47450215 47450523 -19217482 + AluSx SINE Alu 1 302 -10 335 208 46 77 chr20 47450523 47450641 -19217364 + MLT1J LTR MaLR 352 467 -44 423 257 42 103 chr20 47450784 47450933 -19217072 + L2 LINE L2 3015 3143 -170 2508 98 0 0 chr20 47450933 47451239 -19216766 + AluSx SINE Alu 1 306 -6 423 257 42 103 chr20 47451239 47451350 -19216655 + L2 LINE L2 3143 3259 -54 180 0 0 0 chr20 47451374 47451394 -19216611 + (TGAA)n Simple_repeat Simple_repeat 2 21 0 260 317 12 0 chr20 47451701 47451783 -19216222 - MIR SINE MIR -12 250 168 391 248 36 41 chr20 47451823 47451977 -19216028 - MIR SINE MIR -62 146 21 481 370 43 0 chr20 47452449 47452679 -19215326 + MIR SINE MIR 20 259 -3 548 304 25 34 chr20 47452838 47453042 -19214963 - MIR SINE MIR -8 254 53 332 237 273 7 chr20 47453382 47453521 -19214484 + MER5B DNA MER1_type 3 178 0 312 267 67 42 chr20 47453527 47453592 -19214413 - MER5A DNA MER1_type -1 188 117 814 152 8 23 chr20 47453592 47453724 -19214281 + FLAM_A SINE Alu 1 130 -3 312 267 67 42 chr20 47453724 47453778 -19214227 - MER5A DNA MER1_type -72 117 66 533 155 31 0 chr20 47453780 47453877 -19214128 - AluY SINE Alu -7 304 205 301 210 16 0 chr20 47453882 47453944 -19214061 - MER5A DNA MER1_type -119 70 8 778 178 20 0 chr20 47454017 47454163 -19213842 - MER5A DNA MER1_type -40 149 1 225 312 29 92 chr20 47454202 47454375 -19213630 + MIR SINE MIR 69 230 -32 196 210 145 0 chr20 47454420 47454482 -19213523 + L2 LINE L2 146 216 -3098 1787 164 3 35 chr20 47454839 47455156 -19212849 - AluJb SINE Alu 0 312 6 2321 93 0 28 chr20 47455182 47455503 -19212502 - AluSx SINE Alu 0 312 1 955 275 4 24 chr20 47455633 47455884 -19212121 + MIR SINE MIR 17 262 0 269 0 56 0 chr20 47455895 47455931 -19212074 + (CAAAA)n Simple_repeat Simple_repeat 2 39 0 286 170 0 0 chr20 47455954 47456001 -19212004 + L2 LINE L2 3267 3313 0 2556 57 0 0 chr20 47456650 47456948 -19211057 - AluSx SINE Alu -14 298 1 2248 124 0 7 chr20 47457105 47457412 -19210593 + AluSq SINE Alu 1 305 -8 851 137 0 30 chr20 47457818 47457949 -19210056 - FLAM_C SINE Alu -16 127 1 189 0 0 0 chr20 47458190 47458211 -19209794 + (GA)n Simple_repeat Simple_repeat 2 22 0 268 252 72 58 chr20 47458257 47458396 -19209609 + MIR3 SINE MIR 12 152 -56 328 203 0 14 chr20 47458682 47458751 -19209254 - MIR SINE MIR -5 257 190 2220 129 10 0 chr20 47458824 47459133 -19208872 + AluSx SINE Alu 1 312 0 682 205 34 28 chr20 47459159 47459423 -19208582 + MLT1K LTR MaLR 169 489 -99 882 221 93 40 chr20 47459425 47459731 -19208274 + MLT1D LTR MaLR 1 401 -104 2389 98 0 13 chr20 47459731 47460047 -19207958 + AluSx SINE Alu 1 312 0 882 221 93 40 chr20 47460047 47460158 -19207847 + MLT1D LTR MaLR 401 505 0 235 232 14 14 chr20 47460158 47460214 -19207791 + MLT1K LTR MaLR 517 572 -16 593 314 34 8 chr20 47460403 47460642 -19207363 + MIR SINE MIR 12 256 -6 2052 156 16 0 chr20 47460899 47461206 -19206799 - AluSx SINE Alu 0 312 1 767 117 0 50 chr20 47461276 47461396 -19206609 - FLAM_C SINE Alu -9 134 21 791 196 88 31 chr20 47462143 47462337 -19205668 - MER3 DNA MER1_type -4 205 1 379 244 34 34 chr20 47462562 47462681 -19205324 + MER102b DNA MER1_type 223 341 0 362 275 87 29 chr20 47463456 47463594 -19204411 + L1ME LINE L1 5676 5821 -343 2313 92 3 0 chr20 47463600 47463893 -19204112 - AluSp SINE Alu -8 305 12 2217 119 0 3 chr20 47463990 47464284 -19203721 + AluSx SINE Alu 1 293 -19 1951 179 0 3 chr20 47464502 47464804 -19203201 + AluJb SINE Alu 1 301 -11 242 303 0 0 chr20 47464911 47464977 -19203028 - MIR SINE MIR -1 261 196 1658 158 168 12 chr20 47465028 47465427 -19202578 + MLT1C LTR MaLR 1 461 -6 183 244 0 0 chr20 47466651 47466692 -19201313 - L2 LINE L2 -23 3249 3209 1331 168 47 93 chr20 47466699 47466871 -19201134 + L2 LINE L2 2451 2629 -685 1080 231 18 5 chr20 47466871 47467092 -19200913 + MER58A DNA MER1_type 1 224 0 1331 168 47 93 chr20 47467092 47467383 -19200622 + L2 LINE L2 2629 2893 -421 1814 96 9 0 chr20 47467384 47467614 -19200391 - AluSx SINE Alu -80 232 1 4235 161 59 104 chr20 47467614 47468779 -19199226 - L1MC3 LINE L1 -24 7761 6649 2257 120 0 7 chr20 47468786 47469087 -19198918 - AluSq SINE Alu -12 301 3 237 245 0 0 chr20 47469191 47469240 -19198765 - MIR3 SINE MIR -51 157 109 246 286 65 89 chr20 47469376 47469837 -19198168 - L1 LINE L1 -2488 3658 3209 2363 107 3 0 chr20 47469941 47470249 -19197756 - AluSx SINE Alu -3 309 1 1291 133 0 0 chr20 47470966 47471146 -19196859 - AluSx SINE Alu -8 302 123 382 300 0 0 chr20 47471146 47471236 -19196769 + L1MC4 LINE L1 6614 6703 -1339 321 197 0 0 chr20 47471237 47471303 -19196702 + (TATG)n Simple_repeat Simple_repeat 3 68 0 878 153 0 0 chr20 47471303 47471427 -19196578 - AluSx SINE Alu -189 124 1 663 255 98 5 chr20 47471539 47471723 -19196282 + MIR SINE MIR 46 246 -16 582 211 16 8 chr20 47471745 47471873 -19196132 + MIR SINE MIR 106 234 -28 2137 119 0 31 chr20 47472166 47472461 -19195544 + AluSx SINE Alu 1 287 -25 369 0 0 0 chr20 47472461 47472502 -19195503 + (CA)n Simple_repeat Simple_repeat 2 42 0 2137 119 0 31 chr20 47472502 47472525 -19195480 + AluSx SINE Alu 287 309 -3 942 215 146 26 chr20 47472761 47472896 -19195109 + MIR SINE MIR 2 119 -143 1670 189 24 80 chr20 47472896 47473309 -19194696 + MLT1B LTR MaLR 1 390 0 942 215 146 26 chr20 47473309 47473406 -19194599 + MIR SINE MIR 119 262 0 270 395 6 13 chr20 47473398 47473549 -19194456 - MIR SINE MIR -72 136 1 * 1930 123 10 58 chr20 47473654 47473963 -19194042 - AluJb SINE Alu -18 294 1 189 0 0 0 chr20 47474109 47474130 -19193875 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 268 243 93 28 chr20 47474243 47474350 -19193655 - MER20B DNA MER1_type -604 179 66 599 152 0 10 chr20 47474366 47474465 -19193540 - AluSg/x SINE Alu -7 303 206 2273 119 3 0 chr20 47474481 47474792 -19193213 - AluSx SINE Alu 0 312 1 186 158 0 26 chr20 47475429 47475467 -19192538 - MIR SINE MIR -3 259 223 * 600 306 138 41 chr20 47475433 47475940 -19192065 - L2 LINE L2 -12 3301 2728 2111 133 0 0 chr20 47475940 47476233 -19191772 - AluSx SINE Alu -19 293 1 600 306 138 41 chr20 47476233 47476322 -19191683 - L2 LINE L2 -585 2728 2649 790 197 137 30 chr20 47476322 47476556 -19191449 + MLT1J LTR MaLR 8 266 -245 1838 148 4 0 chr20 47476565 47476835 -19191170 + AluJo SINE Alu 11 281 -31 319 250 54 27 chr20 47476866 47476978 -19191027 + MLT1J LTR MaLR 354 468 -43 265 248 40 50 chr20 47477004 47477105 -19190900 - L2 LINE L2 -669 2645 2546 186 103 0 0 chr20 47477430 47477459 -19190546 + (TATG)n Simple_repeat Simple_repeat 2 30 0 1805 125 34 61 chr20 47477463 47477760 -19190245 - AluSx SINE Alu -23 289 1 509 122 89 0 chr20 47478222 47478312 -19189693 - AluY SINE Alu -7 304 207 483 248 134 6 chr20 47478975 47479132 -19188873 - MIR SINE MIR -32 230 54 2466 93 0 0 chr20 47479235 47479545 -19188460 - AluSx SINE Alu -2 310 1 962 297 108 16 chr20 47479619 47479968 -19188037 + L2 LINE L2 2640 2955 -358 2047 117 30 23 chr20 47479968 47480267 -19187738 + AluSx SINE Alu 3 303 -9 962 297 108 16 chr20 47480267 47480521 -19187484 + L2 LINE L2 2955 3293 -20 1153 270 103 46 chr20 47481048 47481391 -19186614 + L2 LINE L2 2272 2594 -719 2398 109 0 6 chr20 47481391 47481703 -19186302 - AluSx SINE Alu 0 312 3 1153 270 103 46 chr20 47481703 47482212 -19185793 + L2 LINE L2 2594 3184 -129 187 288 51 0 chr20 47482205 47482264 -19185741 - L2 LINE L2 -48 3224 3163 * 282 267 78 0 chr20 47482294 47482384 -19185621 + MLT1K LTR MaLR 485 581 -7 220 174 87 6 chr20 47482626 47482691 -19185314 - MIR SINE MIR -55 153 82 2372 75 13 0 chr20 47482940 47483246 -19184759 - AluY SINE Alu -1 310 1 189 214 0 0 chr20 47484053 47484095 -19183910 + A-rich Low_complexity Low_complexity 1 42 0 296 216 72 65 chr20 47484809 47484948 -19183057 + L1ME4a LINE L1 5775 5914 -207 537 223 76 60 chr20 47485074 47485258 -19182747 + MER58C DNA MER1_type 1 187 -28 304 201 52 134 chr20 47485278 47485472 -19182533 + HAL1 LINE L1 2162 2339 -168 782 222 69 135 chr20 47485474 47485807 -19182198 + MLT1I LTR MaLR 99 409 0 905 233 6 0 chr20 47485825 47486001 -19182004 + MER5B DNA MER1_type 1 177 -1 245 121 0 0 chr20 47486007 47486040 -19181965 + MER5B DNA MER1_type 145 177 -1 849 223 112 29 chr20 47486095 47486192 -19181813 - MIR SINE MIR -8 254 166 1755 147 130 69 chr20 47486192 47486599 -19181406 + MSTB1 LTR MaLR 1 432 0 849 223 112 29 chr20 47486599 47486707 -19181298 - MIR SINE MIR -96 166 32 26 30 0 0 chr20 47486817 47486850 -19181155 + AT_rich Low_complexity Low_complexity 1 33 0 752 263 39 59 chr20 47487310 47487593 -19180412 + HAL1 LINE L1 2072 2344 -163 2330 102 13 0 chr20 47487593 47487898 -19180107 + AluSp SINE Alu 1 309 -4 752 263 39 59 chr20 47487898 47488052 -19179953 + HAL1 LINE L1 2344 2500 -7 440 287 48 47 chr20 47488048 47488387 -19179618 + L1MC4a LINE L1 5588 5921 -245 * 2157 95 20 20 chr20 47488558 47488854 -19179151 - AluJb SINE Alu -16 296 1 3056 29 0 0 chr20 47489173 47489524 -19178481 - L1PA3 LINE L1 -4 6151 5801 300 316 11 11 chr20 47489869 47489964 -19178041 + MIR SINE MIR 167 261 -1 1923 143 7 0 chr20 47490561 47490840 -19177165 - AluJo SINE Alu -11 301 21 889 165 65 24 chr20 47491277 47491447 -19176558 - FRAM SINE Alu -4 172 1 860 117 0 0 chr20 47491480 47491600 -19176405 - FLAM_C SINE Alu -1 142 23 269 87 0 22 chr20 47491823 47491869 -19176136 + (TAA)n Simple_repeat Simple_repeat 2 46 0 529 196 209 0 chr20 47491900 47492048 -19175957 + MIR SINE MIR 16 194 -68 793 217 60 32 chr20 47492133 47492172 -19175833 + MER58A DNA MER1_type 1 37 -2383 2667 53 0 0 chr20 47492172 47492476 -19175529 - AluY SINE Alu -7 304 1 793 217 60 32 chr20 47492476 47492653 -19175352 + MER58A DNA MER1_type 37 223 -1 243 61 0 0 chr20 47492718 47492751 -19175254 + (TG)n Simple_repeat Simple_repeat 1 33 0 272 224 0 26 chr20 47492808 47492884 -19175121 + MIR SINE MIR 187 260 -2 278 255 31 51 chr20 47492928 47493026 -19174979 - MIR SINE MIR -104 104 9 2538 190 99 27 chr20 47493226 47493790 -19174215 + MER77 LTR ERV1 1 605 0 477 290 70 19 chr20 47493960 47494304 -19173701 + MLT1K LTR MaLR 183 582 -6 432 336 7 7 chr20 47494655 47494792 -19173213 + MIR SINE MIR 8 144 -118 516 236 9 90 chr20 47494948 47495078 -19172927 + MER113 DNA MER1_type? 4 108 -413 1672 178 69 0 chr20 47495078 47495353 -19172652 + AluJo SINE Alu 5 298 -14 516 236 9 90 chr20 47495353 47495455 -19172550 + MER113 DNA MER1_type? 108 217 -304 850 191 52 9 chr20 47495462 47495864 -19172141 - MLT1D LTR MaLR -5 500 1 1180 234 39 19 chr20 47495930 47496212 -19171793 + MER20B DNA MER1_type 1 291 -492 2361 100 3 0 chr20 47496212 47496512 -19171493 - AluSq SINE Alu -10 303 3 1180 234 39 19 chr20 47496512 47496541 -19171464 + MER20B DNA MER1_type 291 318 -465 711 237 17 35 chr20 47496659 47496757 -19171248 + MER20B DNA MER1_type 515 613 -170 2489 58 0 3 chr20 47496757 47497069 -19170936 + AluY SINE Alu 1 311 0 711 237 17 35 chr20 47497069 47497202 -19170803 + MER20B DNA MER1_type 613 742 -41 795 253 197 23 chr20 47497641 47498181 -19169824 + L2 LINE L2 2647 3297 -16 2022 130 0 7 chr20 47498181 47498481 -19169524 - AluSx SINE Alu -14 298 1 795 253 197 23 chr20 47498481 47498502 -19169503 + L2 LINE L2 3297 3313 0 611 267 142 6 chr20 47498519 47498695 -19169310 - MIR SINE MIR -55 207 8 1775 102 0 0 chr20 47499764 47500000 -19168005 - AluSx SINE Alu -76 236 1 21 36 0 0 chr20 47500189 47500217 -19167788 + AT_rich Low_complexity Low_complexity 1 28 0 1151 193 28 0 chr20 47500381 47500593 -19167412 - MER20B DNA MER1_type 0 219 2 283 200 60 70 chr20 47500812 47500912 -19167093 + MIR SINE MIR 13 111 -151 2406 62 3 7 chr20 47501968 47502274 -19165731 + AluY SINE Alu 1 305 -6 663 193 0 0 chr20 47502567 47502681 -19165324 + MER81 DNA DNA 1 114 0 3475 142 52 72 chr20 47502947 47503327 -19164678 + LTR62 LTR ERVK 1 360 -359 2073 94 35 3 chr20 47503327 47503613 -19164392 - AluSx SINE Alu -17 295 1 3475 142 52 72 chr20 47503613 47503964 -19164041 + LTR62 LTR ERVK 360 717 -2 1354 78 26 0 chr20 47503969 47504160 -19163845 + L1MA5A LINE L1 6102 6297 0 945 252 30 21 chr20 47504188 47504397 -19163608 - MIR SINE MIR -26 236 23 1064 181 13 68 chr20 47504397 47504634 -19163371 - MER58A DNA MER1_type 0 224 1 945 252 30 21 chr20 47504634 47504658 -19163347 - MIR SINE MIR -239 23 1 277 248 0 69 chr20 47504678 47504741 -19163264 - L2 LINE L2 -90 3223 3168 2155 77 0 23 chr20 47504741 47505041 -19162964 + AluY SINE Alu 18 310 -1 277 248 0 69 chr20 47505041 47505078 -19162927 - L2 LINE L2 -145 3168 3130 929 211 31 0 chr20 47505079 47505321 -19162684 - Charlie8 DNA MER1_type -2144 273 71 247 293 201 11 chr20 47505461 47505635 -19162370 + MIR SINE MIR 16 222 -40 457 118 47 47 chr20 47505652 47505737 -19162268 - AluJo SINE Alu -178 134 50 853 240 44 44 chr20 47505827 47505929 -19162076 + L1M4 LINE L1 3371 3472 -2674 1884 125 10 3 chr20 47505929 47506246 -19161759 + AluSx SINE Alu 1 319 0 853 240 44 44 chr20 47506246 47506457 -19161548 + L1M4 LINE L1 3471 3687 -2459 1954 171 65 36 chr20 47506893 47506938 -19161067 - L1MB5 LINE L1 0 6174 6132 1801 124 0 28 chr20 47506938 47507094 -19160911 - AluJo SINE Alu -22 290 144 2160 103 3 3 chr20 47507094 47507396 -19160609 - AluSx SINE Alu -10 302 1 1801 124 0 28 chr20 47507396 47507521 -19160484 - AluJo SINE Alu -168 144 17 1954 171 65 36 chr20 47507521 47507931 -19160074 - L1MB5 LINE L1 -42 6132 5707 2043 92 9 51 chr20 47510012 47510327 -19157678 + AluSx SINE Alu 1 302 -10 263 237 17 0 chr20 47510339 47510398 -19157607 - MER5A DNA MER1_type -89 100 41 588 264 50 50 chr20 47510508 47510769 -19157236 - LTR16C LTR ERVL 0 491 231 2400 81 0 0 chr20 47510844 47511154 -19156851 + AluSq SINE Alu 1 310 -3 234 295 144 51 chr20 47511250 47511742 -19156263 - L2 LINE L2 -191 3081 2538 244 332 90 71 chr20 47511803 47512014 -19155991 - L2 LINE L2 -191 3081 2867 2225 166 39 10 chr20 47512253 47512663 -19155342 - MSTA LTR MaLR -6 422 1 180 0 0 0 chr20 47512687 47512707 -19155298 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2037 104 4 0 chr20 47512708 47512988 -19155017 - AluSq SINE Alu -32 281 1 296 246 80 86 chr20 47513766 47513941 -19154064 + MLT1K LTR MaLR 3 176 -412 2145 117 0 3 chr20 47514150 47514459 -19153546 + AluSx SINE Alu 2 309 -3 309 259 49 91 chr20 47514487 47514630 -19153375 + MIR SINE MIR 69 205 -57 228 333 42 0 chr20 47514683 47514755 -19153250 + L2 LINE L2 3007 3081 -191 511 262 89 33 chr20 47514891 47515162 -19152843 - HAL1 LINE L1 -42 2465 2180 1416 158 0 44 chr20 47515165 47515437 -19152568 - AluJo SINE Alu -15 297 38 989 200 132 122 chr20 47515520 47516020 -19151985 + MLT1H LTR MaLR 43 547 -2 302 192 137 14 chr20 47516021 47516094 -19151911 - HAL1 LINE L1 -390 2117 2036 331 318 37 0 chr20 47516096 47516203 -19151802 - HAL1 LINE L1 -540 1967 1857 526 149 50 25 chr20 47516219 47516340 -19151665 + HAL1 LINE L1 1520 1643 -864 439 266 57 0 chr20 47516591 47516715 -19151290 - L2 LINE L2 0 3313 3183 509 261 70 30 chr20 47516780 47516800 -19151205 + MIR SINE MIR 14 32 -230 1404 156 92 14 chr20 47516800 47517083 -19150922 + AluJb SINE Alu 1 305 -7 509 261 70 30 chr20 47517083 47517261 -19150744 + MIR SINE MIR 32 220 -42 899 201 116 0 chr20 47517392 47517581 -19150424 - MER20 DNA MER1_type -8 211 1 763 152 0 8 chr20 47517640 47517765 -19150240 + FLAM_C SINE Alu 2 125 -18 225 291 19 109 chr20 47518248 47518458 -19149547 + L2 LINE L2 2515 2705 -609 1690 142 61 3 chr20 47518467 47518762 -19149243 + AluJo SINE Alu 1 312 0 2549 118 40 15 chr20 47518784 47519189 -19148816 - MSTB1 LTR MaLR -2 430 16 564 187 35 225 chr20 47519261 47519634 -19148371 + L2 LINE L2 2867 3309 -4 822 155 23 0 chr20 47519634 47519763 -19148242 - FLAM_C SINE Alu -1 132 1 1975 148 0 3 chr20 47519768 47520079 -19147926 - AluSx SINE Alu -2 310 1 564 187 35 225 chr20 47520079 47520245 -19147760 + L2 LINE L2 3112 3308 -5 407 260 0 0 chr20 47520986 47521086 -19146919 - L2 LINE L2 -2 3270 3171 226 0 0 56 chr20 47521206 47521242 -19146763 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 570 159 15 23 chr20 47521409 47521541 -19146464 + MER96B DNA MER1_type? 245 375 -42 266 273 0 74 chr20 47521652 47521681 -19146324 - L2 LINE L2 -273 3040 3010 2207 107 0 0 chr20 47521681 47521979 -19146026 - AluSx SINE Alu -14 298 1 266 273 0 74 chr20 47521979 47522070 -19145935 - L2 LINE L2 -303 3010 2929 3423 193 60 31 chr20 47522130 47522296 -19145709 + L1ME1 LINE L1 4699 4859 -1307 1971 136 0 0 chr20 47522296 47522583 -19145422 - AluSx SINE Alu -25 287 1 3423 193 60 31 chr20 47522583 47523509 -19144496 + L1ME1 LINE L1 4859 5840 -326 1977 178 3 21 chr20 47523509 47523891 -19144114 + THE1C LTR MaLR 1 375 0 3423 193 60 31 chr20 47523891 47524224 -19143781 + L1ME1 LINE L1 5840 6162 -4 642 260 78 34 chr20 47524918 47525321 -19142684 + MLT1K LTR MaLR 45 533 -55 182 343 80 36 chr20 47525387 47525524 -19142481 + MIR3 SINE MIR 4 146 -62 216 333 12 12 chr20 47525558 47525639 -19142366 + L2 LINE L2 2228 2308 -1006 1304 227 51 97 chr20 47525716 47525936 -19142069 + MLT1J LTR MaLR 7 236 -275 1924 145 3 6 chr20 47525936 47526247 -19141758 + AluJo SINE Alu 2 311 -1 1304 227 51 97 chr20 47526247 47526520 -19141485 + MLT1J LTR MaLR 236 477 -34 449 242 164 24 chr20 47526674 47526839 -19141166 + MIR3 SINE MIR 21 208 0 1106 245 48 16 chr20 47526853 47527163 -19140842 - MER102b DNA MER1_type -10 331 12 456 184 123 18 chr20 47527199 47527276 -19140729 - L2 LINE L2 -1 3312 3218 345 24 0 0 chr20 47527276 47527318 -19140687 + (CAAAC)n Simple_repeat Simple_repeat 3 44 0 456 184 123 18 chr20 47527318 47527354 -19140651 - L2 LINE L2 -95 3218 3187 506 312 108 52 chr20 47527362 47527631 -19140374 - L2 LINE L2 0 3272 2989 234 339 16 41 chr20 47527663 47527784 -19140221 + LTR16C LTR ERVL 1 118 -373 1417 154 114 0 chr20 47527803 47528049 -19139956 - AluJo SINE Alu -28 284 11 971 249 172 3 chr20 47528074 47528359 -19139646 + LTR16C LTR ERVL 149 481 -10 320 278 209 8 chr20 47528406 47528669 -19139336 - L2 LINE L2 -453 2861 2546 371 179 90 90 chr20 47530599 47530733 -19137272 - HAL1 LINE L1 -129 2378 2245 1792 252 108 34 chr20 47531360 47532181 -19135824 - HAL1 LINE L1 -631 1876 995 1375 141 97 19 chr20 47532300 47532569 -19135436 - AluJo SINE Alu -22 290 1 526 236 8 16 chr20 47532856 47532983 -19135022 - MER112 DNA MER1_type -134 126 1 3554 121 42 42 chr20 47533413 47534026 -19133979 + LTR18B LTR ERVL 2 614 0 267 284 10 39 chr20 47534313 47534415 -19133590 + LTR67 LTR ERVL 459 557 0 254 99 25 161 chr20 47535514 47535565 -19132440 + LTR67 LTR ERVL 471 509 -48 1507 193 0 20 chr20 47535565 47535865 -19132140 - AluJb SINE Alu -18 294 1 254 99 25 161 chr20 47535865 47535894 -19132111 + LTR67 LTR ERVL 509 540 -17 485 324 29 0 chr20 47536557 47536764 -19131241 + L1MA9 LINE L1 6059 6271 -41 2074 114 0 29 chr20 47536784 47537092 -19130913 + AluSx SINE Alu 3 301 -11 766 246 11 0 chr20 47537110 47537285 -19130720 - MER5B DNA MER1_type 0 178 2 484 204 19 10 chr20 47537420 47537523 -19130482 - MER5B DNA MER1_type -73 105 2 877 192 10 61 chr20 47537564 47537762 -19130243 + MER5A DNA MER1_type 1 188 -1 180 282 132 114 chr20 47538272 47538447 -19129558 - L2 LINE L2 -1 3312 3129 1511 153 55 7 chr20 47538447 47538721 -19129284 + AluJo SINE Alu 1 287 -25 180 282 132 114 chr20 47538721 47538825 -19129180 - L2 LINE L2 -184 3129 3028 2128 102 3 25 chr20 47539062 47539377 -19128628 - AluSx SINE Alu -4 308 1 192 262 12 60 chr20 47539409 47539493 -19128512 + MIR SINE MIR 160 239 -23 255 346 27 0 chr20 47539761 47539873 -19128132 - MIR SINE MIR -62 146 45 186 275 0 101 chr20 47539888 47539957 -19128048 - MIR3 SINE MIR -16 192 131 2466 128 24 49 chr20 47540576 47540985 -19127020 + MSTA LTR MaLR 1 352 -74 838 165 0 0 chr20 47540985 47541118 -19126887 - FLAM_C SINE Alu 0 133 1 2466 128 24 49 chr20 47541118 47541192 -19126813 + MSTA LTR MaLR 352 426 0 3532 209 70 64 chr20 47541312 47541653 -19126352 - L1ME1 LINE L1 -6 6160 5823 2251 102 0 0 chr20 47541653 47541956 -19126049 - AluSc SINE Alu -6 303 1 3532 209 70 64 chr20 47541956 47542185 -19125820 - L1ME1 LINE L1 -343 5823 5597 2091 136 0 3 chr20 47542185 47542495 -19125510 + AluJo SINE Alu 1 309 -3 3532 209 70 64 chr20 47542495 47542757 -19125248 - L1ME1 LINE L1 -569 5597 5338 1758 160 13 0 chr20 47542757 47543057 -19124948 - AluJb SINE Alu -2 310 7 2149 96 3 3 chr20 47543067 47543358 -19124647 - AluSx SINE Alu -21 291 1 3532 209 70 64 chr20 47543358 47543727 -19124278 - L1ME1 LINE L1 -836 5330 4965 2144 103 0 3 chr20 47543727 47544027 -19123978 - AluSx SINE Alu -13 299 1 3532 209 70 64 chr20 47544027 47544132 -19123873 - L1ME1 LINE L1 -1201 4965 4862 1542 180 14 0 chr20 47544132 47544410 -19123595 - AluJo SINE Alu -30 282 1 3532 209 70 64 chr20 47544410 47545042 -19122963 - L1ME1 LINE L1 -1304 4862 4172 2093 112 0 0 chr20 47545182 47545468 -19122537 + AluSx SINE Alu 1 286 -26 2230 112 0 0 chr20 47545513 47545825 -19122180 - AluSx SINE Alu 0 312 1 885 126 81 6 chr20 47545870 47546044 -19121961 - L1MA8 LINE L1 -3 6288 6102 726 114 9 19 chr20 47546044 47546149 -19121856 + THE1B LTR MaLR 1 104 -260 648 118 27 27 chr20 47546147 47546257 -19121748 - THE1B LTR MaLR -24 340 231 * 1159 151 17 0 chr20 47546257 47546436 -19121569 + AluJo SINE Alu 101 282 -30 1472 152 15 45 chr20 47546441 47546710 -19121295 + THE1B LTR MaLR 104 364 0 591 107 66 17 chr20 47546710 47546842 -19121163 - L1MA8 LINE L1 -180 6117 5983 315 81 16 32 chr20 47546845 47546907 -19121098 + (TCCC)n Simple_repeat Simple_repeat 4 64 0 1843 199 10 15 chr20 47546932 47547334 -19120671 - L1M4 LINE L1 -3108 3038 2639 638 250 40 66 chr20 47547375 47547714 -19120291 - L1MC4a LINE L1 -105 6016 5689 1680 200 116 8 chr20 47547735 47548105 -19119900 + MLT1D LTR MaLR 96 505 0 236 192 14 41 chr20 47548105 47548178 -19119827 - Charlie7 DNA MER1_type -5 2607 2537 410 257 12 7 chr20 47548348 47548490 -19119515 - L1MC4a LINE L1 -426 5695 5548 288 0 0 0 chr20 47548958 47548990 -19119015 + (TG)n Simple_repeat Simple_repeat 1 32 0 301 355 0 0 chr20 47550139 47550246 -19117759 + MLT1K LTR MaLR 1 107 -481 1365 259 61 20 chr20 47550246 47550702 -19117303 + MLT1K LTR MaLR 2 476 0 6029 108 9 7 chr20 47550767 47551627 -19116378 + L1PA15 LINE L1 5304 6165 0 289 245 219 40 chr20 47551824 47551975 -19116030 + MIR SINE MIR 9 186 -76 229 255 0 0 chr20 47552078 47552129 -19115876 + L2 LINE L2 3263 3313 0 2245 92 3 0 chr20 47552186 47552492 -19115513 - AluSq SINE Alu -6 307 1 746 261 124 29 chr20 47552512 47552819 -19115186 - MER102b DNA MER1_type 0 341 6 185 225 25 0 chr20 47553242 47553282 -19114723 + L2 LINE L2 3180 3220 -93 1075 281 122 13 chr20 47553282 47553667 -19114338 - LTR16C LTR ERVL 0 491 65 395 267 12 0 chr20 47553700 47553786 -19114219 + L2 LINE L2 3226 3312 -1 252 234 171 57 chr20 47554096 47554254 -19113751 + MER5B DNA MER1_type 1 176 -2 183 303 45 68 chr20 47554138 47554270 -19113735 - MER5A DNA MER1_type -60 129 1 * 266 264 56 0 chr20 47554479 47554551 -19113454 - L1MD3 LINE L1 -8 7987 7912 399 304 87 0 chr20 47554641 47554756 -19113249 - L2 LINE L2 -5 3267 3143 299 287 93 19 chr20 47555574 47555682 -19112323 + MIR SINE MIR 84 199 -63 422 165 0 59 chr20 47555732 47555817 -19112188 + AluJo SINE Alu 2 81 -231 640 190 88 7 chr20 47555827 47555964 -19112041 - L1ME LINE L1 -564 5602 5455 1142 183 0 17 chr20 47555964 47556014 -19111991 + AluJo SINE Alu 87 136 -176 2087 112 0 3 chr20 47556014 47556308 -19111697 + AluSg SINE Alu 1 293 -17 1142 183 0 17 chr20 47556308 47556487 -19111518 + AluJo SINE Alu 136 312 0 905 152 18 6 chr20 47556501 47556666 -19111339 - L1MB3 LINE L1 -7 6176 6010 2308 171 92 107 chr20 47556691 47557460 -19110545 - L1MB3 LINE L1 -435 5731 4952 229 174 0 0 chr20 47557460 47557506 -19110499 - LTR66 LTR ERVL -171 439 394 2308 171 92 107 chr20 47557506 47557568 -19110437 - L1MB3 LINE L1 -1214 4952 4891 772 98 9 0 chr20 47557568 47557680 -19110325 - L1MA1 LINE L1 -4 6298 6186 2308 171 92 107 chr20 47557680 47557822 -19110183 - L1MB3 LINE L1 -1275 4891 4748 1947 125 21 3 chr20 47557822 47558110 -19109895 - AluSq SINE Alu -20 293 1 2308 171 92 107 chr20 47558110 47558252 -19109753 - L1MB3 LINE L1 -1418 4748 4574 368 280 16 111 chr20 47558635 47558780 -19109225 - MER5B DNA MER1_type -4 174 49 180 0 0 0 chr20 47558780 47558800 -19109205 + (CAA)n Simple_repeat Simple_repeat 2 21 0 368 280 16 111 chr20 47558800 47558843 -19109162 - MER5B DNA MER1_type -129 49 4 192 265 20 0 chr20 47558853 47558902 -19109103 - MIR SINE MIR -55 153 104 198 156 0 0 chr20 47559026 47559071 -19108934 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 643 250 60 22 chr20 47559079 47559263 -19108742 - MIR SINE MIR -15 247 57 1591 174 25 0 chr20 47559308 47559629 -19108376 + L1MDa LINE L1 1769 2097 -4443 26 0 0 0 chr20 47559697 47559723 -19108282 + AT_rich Low_complexity Low_complexity 1 26 0 1376 102 0 0 chr20 47559723 47559929 -19108076 - L1MA2 LINE L1 0 6304 6099 642 219 34 51 chr20 47560539 47560717 -19107288 + MLT1J LTR MaLR 21 195 -316 414 253 102 24 chr20 47560724 47560890 -19107115 + MLT1J LTR MaLR 302 480 -31 1751 168 28 0 chr20 47560978 47561264 -19106741 - AluJb SINE Alu -18 294 1 180 125 0 0 chr20 47561287 47561319 -19106686 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 483 219 11 160 chr20 47561501 47561688 -19106317 + MER5C DNA MER1_type 1 159 -165 41 21 0 0 chr20 47561694 47561742 -19106263 + AT_rich Low_complexity Low_complexity 1 48 0 508 194 143 56 chr20 47561753 47561969 -19106036 - MER106A DNA MER1_type 0 236 2 3030 61 3 0 chr20 47562083 47562446 -19105559 + THE1B LTR MaLR 1 364 0 2174 181 9 30 chr20 47562624 47563065 -19104940 + L1MB5 LINE L1 5448 5879 -295 1676 164 0 7 chr20 47563065 47563346 -19104659 + AluJb SINE Alu 1 279 -33 1853 187 67 72 chr20 47563346 47563881 -19104124 - MER51C LTR ERV1 0 640 1 471 35 0 0 chr20 47563891 47563948 -19104057 + (CA)n Simple_repeat Simple_repeat 2 58 0 1486 195 21 34 chr20 47563949 47564277 -19103728 + L1MB5 LINE L1 5851 6174 0 202 306 102 19 chr20 47565618 47565726 -19102279 - MER5C DNA MER1_type -200 124 8 1790 136 3 23 chr20 47565776 47566077 -19101928 - AluJo SINE Alu -17 295 1 2250 96 7 0 chr20 47566168 47566470 -19101535 + AluSq SINE Alu 1 304 -9 230 189 57 0 chr20 47566645 47566698 -19101307 - Charlie8 DNA MER1_type -2141 276 221 522 309 86 8 chr20 47566922 47567178 -19100827 + MLT1L LTR MaLR 338 613 -2 398 241 241 0 chr20 47567183 47567291 -19100714 - Charlie8 DNA MER1_type -2206 211 78 2035 119 13 0 chr20 47567673 47567975 -19100030 + AluSg SINE Alu 1 306 -4 1597 181 21 3 chr20 47568471 47568759 -19099246 - AluJo SINE Alu -19 293 1 323 297 51 18 chr20 47569007 47569184 -19098821 - L1ME LINE L1 -656 5513 5335 389 248 40 0 chr20 47569298 47569399 -19098606 - MIR SINE MIR 0 262 158 718 102 17 0 chr20 47570137 47570255 -19097750 + (TTCC)n Simple_repeat Simple_repeat 1 120 0 1681 174 3 3 chr20 47570255 47570559 -19097446 - AluJo SINE Alu -8 304 1 345 275 115 41 chr20 47570618 47570823 -19097182 + MIR SINE MIR 28 250 -12 431 256 112 61 chr20 47571538 47571890 -19096115 - L2 LINE L2 -246 3067 2712 429 198 9 45 chr20 47572135 47572246 -19095759 + MLT1K LTR MaLR 141 247 -341 453 203 157 69 chr20 47572273 47572490 -19095515 + MLT1K LTR MaLR 327 562 -26 212 371 50 21 chr20 47572893 47573033 -19094972 - L2 LINE L2 0 3272 3129 741 266 120 26 chr20 47573201 47573434 -19094571 - MIR SINE MIR 0 262 8 258 182 0 0 chr20 47573554 47573598 -19094407 - MER106A DNA MER1_type -163 73 30 * 363 267 30 96 chr20 47573595 47573635 -19094370 + MER106B DNA MER1_type 37 78 -981 1836 158 0 7 chr20 47573635 47573938 -19094067 - AluJb SINE Alu -11 301 1 363 267 30 96 chr20 47573938 47574032 -19093973 + MER106B DNA MER1_type 78 985 -74 225 282 56 0 chr20 47574263 47574334 -19093671 - L2 LINE L2 -43 3229 3155 1594 142 14 18 chr20 47574435 47574710 -19093295 + AluJo SINE Alu 38 311 -1 255 206 239 22 chr20 47574849 47574941 -19093064 - MER5A DNA MER1_type -62 127 16 523 215 161 72 chr20 47574976 47575255 -19092750 + L2 LINE L2 2995 3298 -15 310 268 98 0 chr20 47575275 47575357 -19092648 + L2 LINE L2 3223 3312 -1 194 267 0 0 chr20 47575389 47575434 -19092571 - L2 LINE L2 -21 3251 3207 398 308 227 8 chr20 47575498 47575758 -19092247 - L2 LINE L2 -1 3312 2996 270 248 58 74 chr20 47575748 47575869 -19092136 - MIR SINE MIR -128 134 16 * 217 318 0 28 chr20 47576725 47576832 -19091173 + L2 LINE L2 2109 2212 -1102 2116 217 19 39 chr20 47577221 47577515 -19090490 + L1MD3 LINE L1 7462 7742 -253 2179 122 70 75 chr20 47577515 47577943 -19090062 - MSTB LTR MaLR 0 426 1 2116 217 19 39 chr20 47577943 47578183 -19089822 + L1MD3 LINE L1 7742 7985 -10 792 256 39 24 chr20 47578201 47578408 -19089597 + MIR SINE MIR 42 251 -11 1999 130 0 7 chr20 47578565 47578866 -19089139 - AluSg SINE Alu -11 299 1 524 262 71 48 chr20 47578866 47579065 -19088940 + Charlie8 DNA MER1_type 70 276 -65 1725 177 153 33 chr20 47579153 47579604 -19088401 + MLT1D LTR MaLR 1 505 0 2236 113 0 0 chr20 47579635 47579944 -19088061 + AluSx SINE Alu 1 309 -3 319 237 0 0 chr20 47579966 47580042 -19087963 + Charlie8 DNA MER1_type 2341 2416 -1 240 310 35 17 chr20 47580069 47580185 -19087820 - L2 LINE L2 0 3272 3155 376 289 31 39 chr20 47580311 47580439 -19087566 - MIR SINE MIR -74 188 62 275 280 75 21 chr20 47580913 47581006 -19086999 + MLT1J LTR MaLR 2 99 -412 * 1932 167 11 47 chr20 47580990 47581349 -19086656 + MLT1A1 LTR MaLR 19 364 -1 266 247 32 11 chr20 47581447 47581540 -19086465 + MLT1J LTR MaLR 410 504 -7 1102 259 150 76 chr20 47581783 47582288 -19085717 + MLT1H LTR MaLR 1 549 0 580 292 113 0 chr20 47582474 47582659 -19085346 + MIR SINE MIR 47 252 -10 240 186 0 0 chr20 47582632 47582675 -19085330 + L2 LINE L2 3230 3272 0 * 597 296 77 49 chr20 47582725 47583012 -19084993 + L2 LINE L2 3019 3313 0 533 188 54 18 chr20 47583086 47583198 -19084807 - MER91B DNA MER1_type -39 151 36 915 219 6 0 chr20 47583555 47583733 -19084272 - MIR SINE MIR -17 245 67 573 247 129 43 chr20 47584310 47584635 -19083370 + MLT1J LTR MaLR 25 458 -157 398 313 67 22 chr20 47584748 47584882 -19083123 - MIR3 SINE MIR -52 156 17 822 294 0 0 chr20 47584982 47585186 -19082819 + MIR SINE MIR 2 205 -57 553 216 63 21 chr20 47585330 47585520 -19082485 - MER113 DNA MER1_type? -278 243 46 311 210 0 0 chr20 47585598 47585660 -19082345 - MER117 DNA MER1_type -38 159 98 371 276 98 8 chr20 47586528 47586651 -19081354 + MIR SINE MIR 3 136 -126 249 326 47 16 chr20 47586824 47586953 -19081052 - MIR SINE MIR -70 192 60 530 256 183 50 chr20 47587109 47587182 -19080823 - MIR SINE MIR -3 259 197 2460 66 0 0 chr20 47587182 47587486 -19080519 + AluSx SINE Alu 2 305 -7 530 256 183 50 chr20 47587486 47587631 -19080374 - MIR SINE MIR -65 197 12 286 228 39 111 chr20 47587650 47587801 -19080204 - MER112 DNA MER1_type -91 169 31 1748 188 12 12 chr20 47587801 47588142 -19079863 - MER58B DNA MER1_type 0 341 1 286 228 39 111 chr20 47588142 47588170 -19079835 - MER112 DNA MER1_type -229 31 3 207 100 0 0 chr20 47588180 47588210 -19079795 + (TG)n Simple_repeat Simple_repeat 1 30 0 1193 178 33 4 chr20 47588456 47588697 -19079308 + L1MB2 LINE L1 5898 6145 -26 1886 140 31 0 chr20 47588818 47589104 -19078901 - AluJo SINE Alu -17 295 1 463 258 109 70 chr20 47589118 47589374 -19078631 + L2 LINE L2 3047 3312 -1 1749 174 92 62 chr20 47589378 47589866 -19078139 + MLT1D LTR MaLR 1 503 -2 716 308 23 42 chr20 47589897 47590013 -19077992 - MIR SINE MIR 0 262 145 2253 127 13 44 chr20 47590013 47590400 -19077605 + THE1C LTR MaLR 1 375 0 716 308 23 42 chr20 47590400 47590543 -19077462 - MIR SINE MIR -117 145 8 243 139 0 0 chr20 47590665 47590701 -19077304 - MER96B DNA MER1_type? -192 225 190 710 200 46 23 chr20 47590943 47591118 -19076887 - MER96B DNA MER1_type? -238 179 1 242 309 161 12 chr20 47591118 47591280 -19076725 + MIR SINE MIR 58 243 -19 1579 173 27 10 chr20 47591293 47591588 -19076417 - AluJb SINE Alu -12 300 1 2080 186 79 9 chr20 47592212 47592642 -19075363 + MLT1C LTR MaLR 1 460 -7 1393 227 36 36 chr20 47593019 47593407 -19074598 + MER113 DNA MER1_type? 99 486 -35 642 303 112 34 chr20 47593411 47593734 -19074271 - MLT1I LTR MaLR -3 406 59 999 208 60 0 chr20 47593835 47594018 -19073987 + MER58A DNA MER1_type 1 194 -30 250 152 359 11 chr20 47594557 47594649 -19073356 - MIR SINE MIR -102 160 37 230 252 106 32 chr20 47595871 47595994 -19072011 + L2 LINE L2 2625 2756 -558 579 194 118 7 chr20 47596260 47596404 -19071601 + MLT1B LTR MaLR 10 169 -221 866 154 7 14 chr20 47596412 47596555 -19071450 + FRAM SINE Alu 12 153 -23 704 220 95 0 chr20 47596584 47596752 -19071253 + MLT1B LTR MaLR 189 372 -18 310 323 54 15 chr20 47596772 47596902 -19071103 + L2 LINE L2 3136 3270 -2 831 191 143 26 chr20 47596964 47597194 -19070811 + MER20B DNA MER1_type 1 257 -526 1079 168 15 15 chr20 47597204 47597401 -19070604 + MER58A DNA MER1_type 28 224 0 550 268 105 68 chr20 47598225 47598550 -19069455 + MER102b DNA MER1_type 1 337 -4 569 237 15 15 chr20 47598667 47598798 -19069207 + L2 LINE L2 3136 3266 -6 1547 182 27 95 chr20 47598993 47599394 -19068611 - MLT1A2 LTR MaLR 0 374 1 944 150 25 6 chr20 47599454 47599614 -19068391 - MER3 DNA MER1_type -46 163 1 498 288 31 101 chr20 47600345 47600672 -19067333 + MER102a DNA MER1_type 24 327 -3 327 210 7 119 chr20 47600722 47600865 -19067140 - L1M4 LINE L1 -2927 3219 3093 475 330 85 16 chr20 47600891 47601325 -19066680 - L1M4 LINE L1 -997 5149 4686 1809 266 28 26 chr20 47601344 47601916 -19066089 + L1MC4a LINE L1 5345 5917 -1891 4339 210 68 17 chr20 47602460 47603387 -19064618 + L1MEc LINE L1 37 1024 -5372 1978 136 10 0 chr20 47603387 47603689 -19064316 + AluSx SINE Alu 1 305 -7 4339 210 68 17 chr20 47603689 47603800 -19064205 + L1MEc LINE L1 1024 1128 -5268 403 282 23 0 chr20 47603823 47603989 -19064016 + L1MEc LINE L1 1132 1461 -4935 842 151 20 7 chr20 47604297 47604449 -19063556 + L1MB7 LINE L1 5988 6141 -43 1369 115 18 9 chr20 47604449 47604666 -19063339 + AluJb SINE Alu 84 302 -10 2086 126 0 0 chr20 47604708 47605002 -19063003 + AluSx SINE Alu 1 294 -18 399 273 23 8 chr20 47605166 47605298 -19062707 - MER103 DNA DNA -21 145 12 229 209 0 104 chr20 47605361 47605428 -19062577 - MIR SINE MIR -104 104 66 2240 113 0 0 chr20 47605667 47605977 -19062028 - AluSx SINE Alu -2 310 1 857 243 51 47 chr20 47606179 47606434 -19061571 - MIR SINE MIR 0 262 7 359 273 82 27 chr20 47606497 47606680 -19061325 - MIR SINE MIR -60 202 10 313 241 54 45 chr20 47607020 47607132 -19060873 + MIR SINE MIR 38 150 -58 1107 138 0 0 chr20 47607173 47607333 -19060672 - AluJo/FRAM SINE Alu -16 296 137 1604 158 3 21 chr20 47607334 47607618 -19060387 - AluJb SINE Alu -13 299 21 529 250 56 46 chr20 47608178 47608401 -19059604 + MIR SINE MIR 1 226 -36 528 287 13 13 chr20 47608442 47608592 -19059413 + MIR SINE MIR 34 183 -79 342 267 192 49 chr20 47608651 47608995 -19059010 + L2 LINE L2 2899 3291 -22 225 0 0 0 chr20 47608999 47609024 -19058981 + (TGAA)n Simple_repeat Simple_repeat 2 26 0 427 298 113 13 chr20 47609491 47609642 -19058363 + MIR SINE MIR 91 256 -6 24 0 0 0 chr20 47609814 47609838 -19058167 + AT_rich Low_complexity Low_complexity 1 24 0 554 202 128 0 chr20 47609892 47610001 -19058004 + FLAM_A SINE Alu 1 123 -10 1078 272 61 46 chr20 47610406 47610959 -19057046 + L2 LINE L2 2753 3313 0 481 320 46 15 chr20 47611258 47611455 -19056550 + Charlie8 DNA MER1_type 2 204 -2213 235 260 0 0 chr20 47611589 47611639 -19056366 + Charlie8 DNA MER1_type 371 420 -1997 310 240 29 118 chr20 47612054 47612258 -19055747 - L1ME4a LINE L1 -2 6119 5934 340 328 21 38 chr20 47612284 47612519 -19055486 - L1MC4a LINE L1 -1884 5924 5694 316 236 38 19 chr20 47612520 47612626 -19055379 + (CATATA)n Simple_repeat Simple_repeat 4 111 0 383 0 21 0 chr20 47612646 47612693 -19055312 + (CA)n Simple_repeat Simple_repeat 1 48 0 584 269 68 34 chr20 47612693 47612951 -19055054 - L1MC4a LINE L1 -2134 5674 5408 238 283 65 72 chr20 47613042 47613180 -19054825 + MIR SINE MIR 17 153 -55 257 264 0 28 chr20 47613248 47613320 -19054685 - MIR SINE MIR -74 188 119 297 267 78 17 chr20 47613552 47613668 -19054337 + L2 LINE L2 2761 2883 -431 290 254 26 0 chr20 47613712 47613804 -19054201 - L1ME4a LINE L1 -380 5784 5695 462 313 187 14 chr20 47613930 47614224 -19053781 + L2 LINE L2 2926 3270 -2 647 188 216 78 chr20 47614363 47614528 -19053477 + MER5C DNA MER1_type 4 145 -179 2004 142 0 0 chr20 47614528 47614831 -19053174 + AluSx SINE Alu 1 303 -9 647 188 216 78 chr20 47614831 47614947 -19053058 + MER5C DNA MER1_type 145 324 0 245 250 220 45 chr20 47615188 47615320 -19052685 - L2 LINE L2 0 3313 3159 928 219 32 86 chr20 47615501 47615961 -19052044 - L2 LINE L2 -179 3134 2692 240 287 0 46 chr20 47616045 47616132 -19051873 + MIR3 SINE MIR 78 160 -48 2006 134 0 3 chr20 47616233 47616532 -19051473 + AluSx SINE Alu 1 298 -14 218 194 16 0 chr20 47616601 47616663 -19051342 + (TA)n Simple_repeat Simple_repeat 1 63 0 1011 142 19 0 chr20 47616683 47616845 -19051160 - AluJb SINE Alu -20 292 128 334 223 126 0 chr20 47616980 47617124 -19050881 + MLT1H LTR MaLR 377 593 -2 815 277 109 20 chr20 47617124 47617474 -19050531 + L1ME3A LINE L1 5575 5955 -215 1161 212 9 0 chr20 47617481 47617698 -19050307 + MER58A DNA MER1_type 5 223 -1 252 143 0 0 chr20 47618106 47618148 -19049857 + (TG)n Simple_repeat Simple_repeat 1 42 0 1184 201 10 0 chr20 47618235 47618439 -19049566 + MER58A DNA MER1_type 19 224 0 524 344 11 16 chr20 47618450 47618639 -19049366 - MIR SINE MIR -70 192 5 863 245 5 0 chr20 47618943 47619135 -19048870 + MIR SINE MIR 14 206 -56 538 299 155 46 chr20 47619185 47619394 -19048611 + L2 LINE L2 2495 2680 -634 1581 166 0 38 chr20 47619394 47619714 -19048291 + AluJo SINE Alu 1 308 -4 538 299 155 46 chr20 47619714 47619936 -19048069 + L2 LINE L2 2680 2973 -341 1544 191 7 7 chr20 47620091 47620394 -19047611 + AluJb SINE Alu 1 303 -9 390 270 0 0 chr20 47620415 47620504 -19047501 - MER102b DNA MER1_type 0 341 253 232 338 14 0 chr20 47620597 47620671 -19047334 + L2 LINE L2 3151 3225 -47 267 31 0 0 chr20 47620672 47620704 -19047301 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 239 121 0 0 chr20 47620821 47620860 -19047145 - MIR SINE MIR -66 142 103 1147 276 160 5 chr20 47620986 47621431 -19046574 + MLT1K LTR MaLR 71 584 -4 232 250 0 76 chr20 47621563 47621655 -19046350 + MLT1K LTR MaLR 10 94 -494 894 312 77 13 chr20 47621686 47622061 -19045944 + MLT1K LTR MaLR 182 580 -8 1132 241 90 52 chr20 47622488 47622912 -19045093 + MLT1J2 LTR MaLR 5 444 -6 230 267 0 0 chr20 47622980 47623040 -19044965 + MLT1K LTR MaLR 204 263 -325 377 188 12 24 chr20 47623116 47623201 -19044804 + LTR67 LTR ERVL 462 545 -12 450 320 81 40 chr20 47623313 47623535 -19044470 - MIR SINE MIR -26 236 6 698 237 96 46 chr20 47623962 47624181 -19043824 - MIR SINE MIR -29 233 4 184 333 75 54 chr20 47624510 47624603 -19043402 + L2 LINE L2 3139 3233 -39 354 239 34 26 chr20 47624625 47624637 -19043368 + GA-rich Low_complexity Low_complexity 3 13 -107 3499 105 10 2 chr20 47624637 47625124 -19042881 + L1PA10 LINE L1 5677 6167 -1 354 239 34 26 chr20 47625124 47625228 -19042777 + GA-rich Low_complexity Low_complexity 13 120 0 1025 100 14 0 chr20 47625246 47625386 -19042619 + AluSg/x SINE Alu 152 293 -16 202 70 0 70 chr20 47625399 47625442 -19042563 + (GGAAA)n Simple_repeat Simple_repeat 2 41 0 262 231 15 15 chr20 47625491 47625556 -19042449 + GA-rich Low_complexity Low_complexity 2 66 0 630 296 86 9 chr20 47625556 47625789 -19042216 - MIR SINE MIR 0 262 12 279 278 136 45 chr20 47626131 47626286 -19041719 - MIR3 SINE MIR 0 208 34 266 331 113 16 chr20 47626370 47626494 -19041511 + MLT1K LTR MaLR 18 153 -435 445 291 33 6 chr20 47626909 47627071 -19040934 + MIR SINE MIR 33 199 -62 1000 245 32 4 chr20 47627071 47627320 -19040685 - MIR SINE MIR -2 260 5 681 302 29 16 chr20 47627344 47627586 -19040419 - MIR SINE MIR 0 262 18 208 250 0 0 chr20 47627896 47627940 -19040065 + MIR SINE MIR 213 256 -6 491 126 71 118 chr20 47629972 47630099 -19037906 + MSTA LTR MaLR 46 166 -262 229 156 0 0 chr20 47630407 47630452 -19037553 - Alu SINE Alu -1 302 258 * 1303 108 108 9 chr20 47630439 47630651 -19037354 + MSTA LTR MaLR 196 428 0 216 239 0 120 chr20 47630651 47630743 -19037262 - L2 LINE L2 -75 3238 3158 290 191 0 17 chr20 47630807 47630913 -19037092 - MER5A DNA MER1_type -25 164 7 190 289 0 0 chr20 47631189 47631234 -19036771 - L2 LINE L2 0 3313 3269 347 346 23 31 chr20 47631273 47631403 -19036602 + MIR SINE MIR 18 146 -62 201 244 111 56 chr20 47631799 47631889 -19036116 + MIR SINE MIR 19 113 -95 271 238 57 33 chr20 47632045 47632121 -19035884 - MER113 DNA MER1_type? -353 168 86 2214 103 0 0 chr20 47632121 47632423 -19035582 + AluSq SINE Alu 1 302 -11 271 238 57 33 chr20 47632423 47632468 -19035537 - MER113 DNA MER1_type? -435 86 44 324 345 21 37 chr20 47633013 47633204 -19034801 - MIR SINE MIR 0 262 75 200 220 20 20 chr20 47633260 47633310 -19034695 - L2 LINE L2 -1 3312 3263 1050 279 73 31 chr20 47633390 47633773 -19034232 + L2 LINE L2 2915 3313 0 444 283 130 6 chr20 47633808 47634066 -19033939 - L2 LINE L2 -259 3054 2766 570 259 37 55 chr20 47634082 47634282 -19033723 - MIR SINE MIR -48 214 20 485 230 223 7 chr20 47634760 47634908 -19033097 + MIR SINE MIR 13 192 -70 908 237 65 0 chr20 47634910 47635096 -19032909 + MIR SINE MIR 1 198 -64 190 180 98 33 chr20 47635155 47635216 -19032789 + MIR SINE MIR 179 243 -19 611 235 65 78 chr20 47635258 47635335 -19032670 - MER102b DNA MER1_type -110 231 155 2271 90 0 3 chr20 47635335 47635634 -19032371 - AluSg SINE Alu -12 298 1 611 235 65 78 chr20 47635634 47635786 -19032219 - MER102b DNA MER1_type -186 155 5 591 290 48 29 chr20 47635842 47636049 -19031956 - MIR SINE MIR -11 251 41 2179 85 0 10 chr20 47637755 47638049 -19029956 + AluSc SINE Alu 1 291 -18 1744 153 0 14 chr20 47638316 47638610 -19029395 + AluJb SINE Alu 1 290 -22 285 318 93 31 chr20 47638839 47638968 -19029037 + MIR SINE MIR 7 143 -119 1161 162 5 59 chr20 47639060 47639282 -19028723 + MER2 DNA MER2_type 1 210 -135 297 0 0 0 chr20 47639324 47639357 -19028648 + (TA)n Simple_repeat Simple_repeat 1 33 0 * 441 0 0 0 chr20 47639356 47639405 -19028600 + (GA)n Simple_repeat Simple_repeat 2 50 0 1947 120 0 0 chr20 47639405 47639671 -19028334 - AluSx SINE Alu -40 272 7 245 250 19 0 chr20 47639680 47639732 -19028273 + MER2 DNA MER2_type 274 326 -19 1591 192 39 18 chr20 47639888 47640222 -19027783 + MER58B DNA MER1_type 1 341 0 2207 171 54 12 chr20 47640388 47640797 -19027208 + MSTB LTR MaLR 1 426 0 484 101 69 9 chr20 47640837 47641055 -19026950 + (TA)n Simple_repeat Simple_repeat 1 231 0 970 216 52 79 chr20 47641443 47641734 -19026271 + MER102a DNA MER1_type 42 324 -6 247 208 0 38 chr20 47642075 47642128 -19025877 + polypurine Low_complexity Low_complexity 2 52 0 770 269 47 69 chr20 47642428 47643076 -19024929 - L1M4 LINE L1 -406 5772 5156 633 294 125 36 chr20 47644048 47644249 -19023756 + L1MCa LINE L1 814 996 -5477 2178 116 3 0 chr20 47644249 47644551 -19023454 + AluSq SINE Alu 1 303 -10 633 294 125 36 chr20 47644551 47645176 -19022829 + L1MCa LINE L1 996 1923 -4550 302 273 41 50 chr20 47645261 47645382 -19022623 + L1MCa LINE L1 2125 2244 -4182 352 280 48 2 chr20 47645410 47645576 -19022429 + L1MCa LINE L1 2421 2585 -3841 388 229 83 0 chr20 47645582 47645678 -19022327 + L1MCa LINE L1 2631 2734 -3692 271 256 44 22 chr20 47646062 47646152 -19021853 - MIR SINE MIR -12 250 159 3081 133 28 9 chr20 47646309 47646852 -19021153 + L1MA4 LINE L1 5748 6300 0 439 238 346 0 chr20 47647030 47647215 -19020790 - MIR SINE MIR 0 262 14 590 218 98 0 chr20 47647318 47647451 -19020554 + MIR SINE MIR 50 195 -67 679 266 254 22 chr20 47648437 47648881 -19019124 + L2 LINE L2 2431 2977 -337 417 244 170 30 chr20 47649055 47649285 -19018720 + MLT1K LTR MaLR 94 355 -233 383 298 10 0 chr20 47649790 47649894 -19018111 - L2 LINE L2 -25 3247 3143 309 266 8 39 chr20 47650243 47650371 -19017634 - L1MC4a LINE L1 -1926 5882 5759 2473 70 0 10 chr20 47650639 47650939 -19017066 + AluY SINE Alu 3 299 -12 1285 154 5 41 chr20 47651023 47651243 -19016762 - AluJo SINE Alu -100 212 1 1695 99 0 0 chr20 47651476 47651689 -19016316 - AluSx SINE Alu -99 213 1 898 147 0 0 chr20 47651805 47651934 -19016071 - FLAM_C SINE Alu -4 129 1 1166 185 32 22 chr20 47651935 47652346 -19015659 - L1MD2 LINE L1 -12 6347 5880 572 263 106 17 chr20 47653107 47653342 -19014663 - MIR SINE MIR 0 262 8 490 299 107 48 chr20 47653569 47654147 -19013858 - L1MC5 LINE L1 -36 7925 7314 773 273 62 9 chr20 47654538 47654765 -19013240 + MIR SINE MIR 4 242 -20 359 280 35 19 chr20 47654749 47654870 -19013135 - MIR SINE MIR -69 139 44 * 554 318 165 46 chr20 47655039 47655470 -19012535 + L2 LINE L2 2828 3309 -4 1445 247 102 9 chr20 47655681 47656134 -19011871 + MLT1J LTR MaLR 2 496 -15 300 53 0 0 chr20 47656203 47656241 -19011764 + (TG)n Simple_repeat Simple_repeat 2 39 0 520 242 89 45 chr20 47656252 47656521 -19011484 - L1MC5 LINE L1 -48 7913 7633 423 275 3 70 chr20 47656562 47656773 -19011232 - L1MC4a LINE L1 -239 5882 5688 1076 181 52 14 chr20 47656773 47656983 -19011022 - MER20 DNA MER1_type 0 219 2 423 275 3 70 chr20 47656983 47657004 -19011001 - L1MC4a LINE L1 -433 5688 5667 265 297 5 10 chr20 47657704 47657830 -19010175 + A-rich Low_complexity Low_complexity 1 125 0 255 238 32 0 chr20 47657871 47657934 -19010071 - L2 LINE L2 0 3313 3249 999 162 60 0 chr20 47657935 47658102 -19009903 + AluSg/x SINE Alu 132 308 -4 573 244 52 35 chr20 47658318 47658490 -19009515 - MIR SINE MIR -21 241 67 992 167 57 5 chr20 47658541 47658733 -19009272 + MER20 DNA MER1_type 15 216 -3 469 254 71 0 chr20 47658872 47658998 -19009007 + MIR SINE MIR 128 262 0 406 264 150 57 chr20 47659595 47659822 -19008183 + L2 LINE L2 2806 3053 -219 939 169 84 97 chr20 47659959 47660020 -19007985 + MER33 DNA MER1_type 9 69 -2516 2007 146 0 28 chr20 47660020 47660341 -19007664 + AluSx SINE Alu 1 312 0 939 169 84 97 chr20 47660341 47660496 -19007509 + MER33 DNA MER1_type 69 222 -2363 2337 74 0 23 chr20 47660496 47660795 -19007210 - AluY SINE Alu -19 292 1 939 169 84 97 chr20 47660795 47660897 -19007108 + MER33 DNA MER1_type 222 324 0 413 264 27 9 chr20 47660913 47661023 -19006982 + L2 LINE L2 3202 3313 0 767 211 64 0 chr20 47661036 47661192 -19006813 + FRAM SINE Alu 1 166 0 193 261 14 43 chr20 47662040 47662109 -19005896 + MIR SINE MIR 31 97 -165 204 133 133 0 chr20 47662228 47662273 -19005732 - MIR SINE MIR -186 76 26 836 239 47 14 chr20 47662498 47662711 -19005294 + MIR SINE MIR 25 244 -18 304 290 49 33 chr20 47662933 47663116 -19004889 + L2 LINE L2 2615 2800 -514 764 270 70 4 chr20 47663117 47663347 -19004658 + MER112 DNA MER1_type 1 245 -15 204 322 251 6 chr20 47663393 47663564 -19004441 + L2 LINE L2 2834 3046 -267 463 225 23 78 chr20 47663611 47663740 -19004265 + MER5B DNA MER1_type 21 142 -36 699 227 72 10 chr20 47663772 47663966 -19004039 + L2 LINE L2 3106 3311 -2 1586 232 27 53 chr20 47664071 47664558 -19003447 - LTR16C LTR ERVL -17 474 1 316 256 15 68 chr20 47664624 47664757 -19003248 - L2 LINE L2 -180 3092 2967 4876 119 37 23 chr20 47664846 47664995 -19003010 - L1MA5 LINE L1 -4 6296 6150 1998 156 10 0 chr20 47664995 47665302 -19002703 + AluJo SINE Alu 1 310 -2 4876 119 37 23 chr20 47665302 47665945 -19002060 - L1MA5 LINE L1 -150 6150 5490 2136 112 30 26 chr20 47665945 47666269 -19001736 - AluSx SINE Alu 0 312 1 4876 119 37 23 chr20 47666269 47666293 -19001712 - L1MA5 LINE L1 -810 5490 5468 877 218 58 10 chr20 47666510 47666716 -19001289 - MER58A DNA MER1_type 0 224 9 647 314 11 5 chr20 47666764 47666949 -19001056 + MIR SINE MIR 77 262 0 698 234 77 34 chr20 47666959 47667168 -19000837 + MIR SINE MIR 32 249 -13 204 254 0 0 chr20 47667648 47667707 -19000298 + (CGTG)n Simple_repeat Simple_repeat 1 59 0 666 152 146 41 chr20 47667862 47668033 -18999972 + MER20 DNA MER1_type 31 219 0 4006 96 28 2 chr20 47668197 47668770 -18999235 + L1PA13 LINE L1 5573 6160 -3 1673 215 74 9 chr20 47669475 47669743 -18998262 - MLT1D LTR MaLR -8 497 185 441 0 0 0 chr20 47669743 47669792 -18998213 + (TG)n Simple_repeat Simple_repeat 1 49 0 1673 215 74 9 chr20 47669792 47669984 -18998021 - MLT1D LTR MaLR -320 185 7 333 225 0 0 chr20 47670181 47670252 -18997753 - MIR SINE MIR -12 250 180 1996 88 164 16 chr20 47670260 47670577 -18997428 + THE1B LTR MaLR 1 364 0 1233 252 91 17 chr20 47670577 47670993 -18997012 + MLT1J2 LTR MaLR 4 450 0 225 328 37 15 chr20 47671001 47671135 -18996870 + L1MC/D LINE L1 5783 5919 -1889 1329 196 0 4 chr20 47671263 47671488 -18996517 + MER58A DNA MER1_type 1 224 0 195 161 0 0 chr20 47671976 47672007 -18995998 + L2 LINE L2 3265 3295 -18 1258 58 32 0 chr20 47672029 47672183 -18995822 + AluSp SINE Alu 140 298 -15 806 308 148 25 chr20 47672964 47673453 -18994552 - L2 LINE L2 -1 3271 2715 797 186 64 0 chr20 47673577 47673749 -18994256 + MER20 DNA MER1_type 3 185 -34 424 305 86 0 chr20 47674032 47674183 -18993822 + MIR SINE MIR 98 261 -1 290 167 37 0 chr20 47674789 47674843 -18993162 + L2 LINE L2 3258 3313 0 511 294 145 41 chr20 47674921 47675370 -18992635 + L2 LINE L2 2759 3303 -10 272 190 52 17 chr20 47675471 47675529 -18992476 - MIR SINE MIR -111 151 92 407 298 30 15 chr20 47675578 47675709 -18992296 - MIR3 SINE MIR -71 137 5 867 288 42 2 chr20 47676172 47676555 -18991450 + LTR16C LTR ERVL 2 491 0 384 244 98 55 chr20 47676937 47677101 -18990904 - MIR3 SINE MIR -1 207 37 310 225 0 28 chr20 47677221 47677292 -18990713 - L2 LINE L2 -21 3251 3183 * 407 314 83 0 chr20 47677269 47677425 -18990580 + MIR SINE MIR 9 177 -85 360 271 98 38 chr20 47677405 47677538 -18990467 - MIR SINE MIR -118 144 4 * 289 139 0 0 chr20 47677623 47677666 -18990339 - L2 LINE L2 -1 3312 3270 450 243 43 57 chr20 47677713 47677923 -18990082 + MLT1K LTR MaLR 376 582 -6 584 297 51 5 chr20 47678181 47678376 -18989629 + MIR SINE MIR 1 204 -58 244 293 160 0 chr20 47678723 47678829 -18989176 - L2 LINE L2 -5 3267 3145 330 250 43 11 chr20 47678829 47678921 -18989084 - MER112 DNA MER1_type -12 248 154 1290 204 0 0 chr20 47678924 47679145 -18988860 + MER58A DNA MER1_type 4 224 0 1927 171 23 0 chr20 47679182 47679487 -18988518 - AluJo SINE Alu 0 312 1 558 263 33 9 chr20 47679488 47679803 -18988202 + MLT1I LTR MaLR 1 406 -3 290 222 62 0 chr20 47679807 47679888 -18988117 - MER112 DNA MER1_type -107 153 68 192 295 158 95 chr20 47680036 47680192 -18987813 + L3b LINE CR1 1125 1303 -280 1210 189 14 0 chr20 47680192 47680409 -18987596 - MER58A DNA MER1_type -1 223 4 192 295 158 95 chr20 47680409 47680493 -18987512 + L3b LINE CR1 1303 1380 -203 840 199 147 0 chr20 47680552 47680743 -18987262 + MER58A DNA MER1_type 6 224 0 691 212 15 0 chr20 47682012 47682149 -18985856 - MIR SINE MIR -21 241 103 1940 121 0 40 chr20 47682193 47682490 -18985515 - AluJb SINE Alu -17 295 11 369 345 35 0 chr20 47682641 47682783 -18985222 - MIR SINE MIR -7 255 109 231 208 0 21 chr20 47683378 47683426 -18984579 + GA-rich Low_complexity Low_complexity 1 47 0 209 247 148 25 chr20 47683842 47683923 -18984082 - MIR SINE MIR -63 199 109 899 180 14 95 chr20 47684008 47684230 -18983775 - MER20 DNA MER1_type -15 204 1 2127 103 7 0 chr20 47684256 47684567 -18983438 + AluSx SINE Alu 1 313 0 352 200 106 55 chr20 47684579 47684726 -18983279 - MIR SINE MIR -62 146 20 1353 167 0 0 chr20 47684908 47685106 -18982899 + AluJo SINE Alu 95 292 -20 216 0 0 0 chr20 47685110 47685134 -18982871 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1920 172 10 3 chr20 47685265 47685568 -18982437 + AluJo SINE Alu 1 305 -7 653 253 22 34 chr20 47685573 47685751 -18982254 - MIR SINE MIR -24 238 63 539 333 29 5 chr20 47685795 47686002 -18982003 - MIR SINE MIR -47 215 4 308 301 138 0 chr20 47686023 47686146 -18981859 - MIR SINE MIR -70 192 53 739 246 34 56 chr20 47686834 47687102 -18980903 + MIR SINE MIR 1 262 0 669 241 52 21 chr20 47687326 47687517 -18980488 - MIR SINE MIR -14 248 52 1578 270 14 76 chr20 47687722 47688315 -18979690 - MLT1K LTR MaLR 0 588 33 658 251 90 36 chr20 47688326 47688459 -18979546 + L1MC4 LINE L1 7691 7815 -227 1596 192 124 74 chr20 47688459 47688975 -18979030 + MLT1F LTR MaLR 1 542 0 658 251 90 36 chr20 47688975 47689175 -18978830 + L1MC4 LINE L1 7815 8042 0 865 243 64 23 chr20 47689192 47689410 -18978595 + MIR SINE MIR 20 246 -16 326 195 24 24 chr20 47689415 47689497 -18978508 + L2 LINE L2 3232 3313 0 765 234 127 0 chr20 47689842 47690039 -18977966 - MIR SINE MIR 0 262 41 2037 149 3 0 chr20 47690831 47691132 -18976873 - AluSx SINE Alu -10 302 1 1339 179 0 25 chr20 47691188 47691428 -18976577 - MER46A DNA MER2_type -1 235 2 24 67 0 0 chr20 47691472 47691517 -18976488 + AT_rich Low_complexity Low_complexity 1 45 0 786 214 31 46 chr20 47691549 47691745 -18976260 - MIR SINE MIR 0 262 70 549 250 206 11 chr20 47691854 47692034 -18975971 - MIR SINE MIR -2 260 46 270 119 0 0 chr20 47692343 47692385 -18975620 + L2 LINE L2 3272 3313 0 215 218 0 39 chr20 47692520 47692598 -18975407 + L2 LINE L2 2917 2991 -281 857 262 62 61 chr20 47692664 47693194 -18974811 + MLT1K LTR MaLR 2 588 0 344 180 0 0 chr20 47693399 47693460 -18974545 - L2 LINE L2 0 3313 3253 547 303 44 12 chr20 47693498 47693843 -18974162 + REP3 LTR ERV 26 429 -133 289 318 109 55 chr20 47694050 47694210 -18973795 - MIR SINE MIR -11 251 74 1784 125 52 75 chr20 47694210 47694417 -18973588 - THE1C LTR MaLR 0 375 180 2121 118 3 10 chr20 47694417 47694721 -18973284 - AluSx SINE Alu -10 302 1 1784 125 52 75 chr20 47694721 47694897 -18973108 - THE1C LTR MaLR -195 180 1 289 318 109 55 chr20 47694897 47694956 -18973049 - MIR SINE MIR -188 74 20 749 200 65 21 chr20 47695701 47695905 -18972100 - MIR SINE MIR 0 262 52 198 0 0 0 chr20 47695934 47695956 -18972049 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 246 283 163 0 chr20 47696140 47696232 -18971773 + MIR SINE MIR 108 214 -48 404 210 12 0 chr20 47696243 47696324 -18971681 + MER20 DNA MER1_type 1 82 -137 283 292 45 22 chr20 47696433 47696522 -18971483 + MIR SINE MIR 150 240 -22 274 197 98 0 chr20 47696911 47696972 -18971033 + MIR3 SINE MIR 96 162 -46 364 240 40 0 chr20 47697161 47697261 -18970744 - HAL1 LINE L1 -116 2391 2288 226 240 20 0 chr20 47697314 47697364 -18970641 - L3 LINE CR1 -2 1575 1525 699 162 120 0 chr20 47697480 47697597 -18970408 - FLAM_C SINE Alu -2 131 1 198 348 155 7 chr20 47697731 47697886 -18970119 - L3 LINE CR1 -103 1474 1297 234 91 0 0 chr20 47698136 47698169 -18969836 + (T)n Simple_repeat Simple_repeat 1 33 0 732 292 77 9 chr20 47698703 47698936 -18969069 + MIR SINE MIR 14 262 0 815 267 52 36 chr20 47699101 47699352 -18968653 + MIR SINE MIR 8 262 0 441 278 42 21 chr20 47699408 47699552 -18968453 - MIR SINE MIR -52 210 64 2402 105 33 30 chr20 47699554 47699917 -18968088 + THE1B LTR MaLR 1 364 0 1746 291 96 30 chr20 47700505 47700619 -18967386 - L1MC4a LINE L1 -743 5403 5298 2062 163 82 88 chr20 47700619 47701140 -18966865 + MLT2B1 LTR ERVL 1 518 -2 1746 291 96 30 chr20 47701140 47702009 -18965996 - L1MC4a LINE L1 -848 5298 5122 1721 193 102 19 chr20 47702038 47702469 -18965536 + MLT1C LTR MaLR 1 467 0 2628 52 0 0 chr20 47702628 47702933 -18965072 - AluY SINE Alu -6 305 1 520 225 151 93 chr20 47703048 47703412 -18964593 + MER113 DNA MER1_type? 12 396 -125 1802 253 91 72 chr20 47703522 47703938 -18964067 - L1MC4 LINE L1 -46 7996 7589 2167 114 10 0 chr20 47703938 47704236 -18963769 - AluSx SINE Alu -11 301 1 1802 253 91 72 chr20 47704236 47704819 -18963186 - L1MC4 LINE L1 -453 7589 6978 1271 280 88 10 chr20 47705431 47705838 -18962167 - MLT1K LTR MaLR -25 563 125 406 155 0 0 chr20 47706968 47707026 -18960979 - Tigger1 DNA MER2_type 0 2418 2361 11571 120 22 5 chr20 47707026 47708715 -18959290 + Tigger1 DNA MER2_type 1 1717 -701 1708 147 11 4 chr20 47708715 47708988 -18959017 + AluSx SINE Alu 1 275 -37 2421 67 0 3 chr20 47708988 47709283 -18958722 - AluY SINE Alu -15 296 1 3114 130 4 23 chr20 47709283 47709766 -18958239 + Tigger1 DNA MER2_type 1945 2418 0 389 260 79 11 chr20 47709858 47709991 -18958014 + MIR SINE MIR 9 153 -62 272 273 13 0 chr20 47710030 47710107 -18957898 - L2 LINE L2 -19 3253 3176 194 260 8 0 chr20 47710814 47710941 -18957064 + (CA)n Simple_repeat Simple_repeat 1 128 0 1520 241 42 69 chr20 47711221 47711745 -18956260 - Charlie8 DNA MER1_type -1907 510 1 338 283 40 46 chr20 47711749 47711922 -18956083 + MIR3 SINE MIR 16 187 -21 203 233 147 52 chr20 47712475 47712560 -18955445 - MIR SINE MIR -19 243 143 2604 101 13 16 chr20 47712560 47712936 -18955069 + THE1C LTR MaLR 1 375 0 203 233 147 52 chr20 47712936 47712966 -18955039 - MIR SINE MIR -119 143 117 194 270 60 30 chr20 47713325 47713425 -18954580 + MIR SINE MIR 50 152 -110 1753 237 119 32 chr20 47713489 47714094 -18953911 + L2 LINE L2 2358 2908 -405 611 211 108 41 chr20 47714094 47714288 -18953717 - MER63A DNA MER1_type 0 210 4 1753 237 119 32 chr20 47714288 47714322 -18953683 + L2 LINE L2 2908 2938 -375 2954 6 0 6 chr20 47714322 47714641 -18953364 + AluYb8 SINE Alu 1 317 -1 1753 237 119 32 chr20 47714641 47714885 -18953120 + L2 LINE L2 2938 3313 0 2631 135 36 5 chr20 47715242 47715680 -18952325 - L1MA4 LINE L1 -8 6292 5841 250 246 14 29 chr20 47715758 47715827 -18952178 - L3 LINE CR1 -47 1530 1463 279 0 0 0 chr20 47716059 47716090 -18951915 + (CA)n Simple_repeat Simple_repeat 2 32 0 318 149 0 0 chr20 47716090 47716137 -18951868 + MER20 DNA MER1_type 173 219 0 1046 283 66 43 chr20 47716146 47716585 -18951420 - Charlie8 DNA MER1_type -1968 449 1 2526 120 67 10 chr20 47716849 47717250 -18950755 + MSTA LTR MaLR 5 428 0 351 240 47 54 chr20 47717682 47717811 -18950194 + MLT1K LTR MaLR 437 564 -24 333 0 0 0 chr20 47718414 47718451 -18949554 + (A)n Simple_repeat Simple_repeat 1 37 0 352 188 177 0 chr20 47718573 47718669 -18949336 + Charlie8 DNA MER1_type 102 214 -2203 627 247 31 16 chr20 47719023 47719217 -18948788 + L2 LINE L2 3117 3313 0 279 0 0 0 chr20 47719455 47719486 -18948519 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1895 137 14 0 chr20 47719488 47719765 -18948240 - AluSx SINE Alu -31 281 1 188 230 81 14 chr20 47719846 47719920 -18948085 + MIR SINE MIR 58 136 -72 313 221 115 10 chr20 47720238 47720342 -18947663 - MIR SINE MIR -113 149 35 814 263 18 4 chr20 47720530 47720758 -18947247 + MIR SINE MIR 13 243 -19 260 293 58 7 chr20 47721471 47721617 -18946388 - MIR SINE MIR -48 214 59 215 288 160 0 chr20 47722047 47722172 -18945833 + MIR SINE MIR 92 236 -26 202 306 65 0 chr20 47722369 47722431 -18945574 - MIR SINE MIR -81 181 116 324 293 96 50 chr20 47723032 47723271 -18944734 - MIR SINE MIR 0 262 13 243 282 64 75 chr20 47723361 47723549 -18944456 - MIR SINE MIR -3 259 74 608 278 30 39 chr20 47723580 47723810 -18944195 - MIR SINE MIR -27 235 8 576 186 106 18 chr20 47724401 47724514 -18943491 - MER58B DNA MER1_type -1 340 218 523 214 139 19 chr20 47724783 47724984 -18943021 + MIR SINE MIR 31 249 -13 289 353 60 0 chr20 47728174 47728341 -18939664 + MIR SINE MIR 83 259 -3 270 0 0 0 chr20 47728897 47728927 -18939078 + (TG)n Simple_repeat Simple_repeat 2 31 0 229 61 20 41 chr20 47729032 47729081 -18938924 + (CAAAAA)n Simple_repeat Simple_repeat 2 49 0 21 0 0 0 chr20 47730334 47730355 -18937650 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr20 47732349 47732387 -18935618 + GC_rich Low_complexity Low_complexity 1 38 0 206 308 0 0 chr20 47732424 47732489 -18935516 + (CCG)n Simple_repeat Simple_repeat 1 65 0 716 261 106 27 chr20 47732878 47733208 -18934797 - L2 LINE L2 0 3313 2958 215 224 0 0 chr20 47733226 47733283 -18934722 - MIR SINE MIR -63 145 89 579 241 32 0 chr20 47733514 47733672 -18934333 - MER53 DNA DNA -11 178 16 259 263 197 20 chr20 47733704 47733856 -18934149 - MIR SINE MIR -66 196 18 727 224 110 37 chr20 47733892 47734137 -18933868 + MER69 DNA AcHobo 19 281 -2245 * 872 207 11 0 chr20 47734133 47734321 -18933684 + MER69 DNA AcHobo 2337 2526 0 325 304 29 43 chr20 47734473 47734611 -18933394 + MIR SINE MIR 117 252 -10 192 182 0 0 chr20 47734793 47734837 -18933168 + (TA)n Simple_repeat Simple_repeat 2 45 0 2032 156 0 6 chr20 47734864 47735190 -18932815 + MER47A DNA MER2_type 1 324 -42 300 213 50 0 chr20 47735223 47735303 -18932702 - L1MC4 LINE L1 -1341 6701 6618 785 171 28 61 chr20 47735538 47735655 -18932350 + MER5B DNA MER1_type 3 113 -65 2334 118 0 0 chr20 47735655 47735960 -18932045 - AluSx SINE Alu -7 305 1 785 171 28 61 chr20 47735960 47736023 -18931982 + MER5B DNA MER1_type 113 177 -1 2401 102 0 0 chr20 47737004 47737309 -18930696 - AluSp SINE Alu -8 305 1 210 37 0 0 chr20 47737492 47737519 -18930486 + (GA)n Simple_repeat Simple_repeat 2 28 0 1380 202 35 41 chr20 47737939 47738021 -18929984 + MLT1A1 LTR MaLR 1 82 -283 2393 78 3 3 chr20 47738021 47738328 -18929677 + AluY SINE Alu 1 307 -4 1380 202 35 41 chr20 47738328 47738612 -18929393 + MLT1A1 LTR MaLR 82 365 0 458 103 0 0 chr20 47738643 47738729 -18929276 + Alu SINE Alu 223 308 0 339 191 0 0 chr20 47738730 47738793 -18929212 + L1ME1 LINE L1 5134 5196 -950 341 135 0 0 chr20 47738795 47738847 -18929158 + AluJ/FLAM SINE Alu 31 82 -220 413 292 58 0 chr20 47739048 47739185 -18928820 + L2 LINE L2 2944 3088 -225 389 165 200 0 chr20 47739604 47739689 -18928316 + MER94 DNA DNA 32 133 -1 574 53 80 0 chr20 47739692 47739767 -18928238 + LTR8 LTR ERV1 1 81 -610 745 197 101 0 chr20 47739859 47740037 -18927968 - L1M4 LINE L1 -923 5223 5028 1033 76 0 55 chr20 47740038 47740183 -18927822 - AluSg/x SINE Alu -17 295 159 2909 229 41 41 chr20 47740340 47741015 -18926990 + L1ME1 LINE L1 5241 5917 -249 2015 142 3 26 chr20 47741015 47741326 -18926679 - AluSx SINE Alu -8 304 1 2909 229 41 41 chr20 47741326 47741509 -18926496 + L1ME1 LINE L1 5917 6099 -67 396 248 39 23 chr20 47741424 47741553 -18926452 + L1MA10 LINE L1 6169 6299 -35 * 1588 171 105 26 chr20 47741556 47741718 -18926287 - Charlie4a DNA MER1_type -1576 385 237 1863 124 0 36 chr20 47741718 47742016 -18925989 + AluSx SINE Alu 20 307 0 1588 171 105 26 chr20 47742016 47742203 -18925802 - Charlie4a DNA MER1_type -1724 237 7 442 114 57 0 chr20 47743647 47743717 -18924288 + MSTC LTR MaLR 1 74 -354 1373 169 128 22 chr20 47743721 47743994 -18924011 + AluJo SINE Alu 1 302 0 21 107 0 0 chr20 47744071 47744155 -18923850 + AT_rich Low_complexity Low_complexity 1 84 0 238 201 40 17 chr20 47744174 47744348 -18923657 + (CTATA)n Simple_repeat Simple_repeat 2 179 0 1206 185 82 0 chr20 47744412 47744655 -18923350 - L1MC4 LINE L1 -495 7547 7285 * 1297 232 57 60 chr20 47744652 47744845 -18923160 - L1MC4 LINE L1 -1066 6976 6784 1856 163 11 0 chr20 47744845 47745122 -18922883 + AluJo SINE Alu 1 280 -32 180 0 0 0 chr20 47745122 47745142 -18922863 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 1297 232 57 60 chr20 47745142 47745330 -18922675 - L1MC4 LINE L1 -1256 6786 6595 1874 236 59 5 chr20 47745331 47745771 -18922234 - MER45C DNA AcHobo 0 953 490 1252 266 30 12 chr20 47745797 47746131 -18921874 - MER45C DNA AcHobo -613 340 1 444 221 80 0 chr20 47746147 47746260 -18921745 - L1MC4 LINE L1 -1458 6584 6463 2261 120 0 0 chr20 47746817 47747116 -18920889 + AluSx SINE Alu 1 299 -13 1710 137 4 23 chr20 47747539 47747802 -18920203 + AluJb SINE Alu 1 258 -54 221 0 35 0 chr20 47747823 47747852 -18920153 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 237 33 0 0 chr20 47747910 47747940 -18920065 + (TTA)n Simple_repeat Simple_repeat 1 30 0 766 209 0 0 chr20 47747943 47748082 -18919923 - FRAM SINE Alu -33 143 5 290 338 57 24 chr20 47748116 47748450 -18919555 + L1MC/D LINE L1 5266 5610 -2198 34 0 0 0 chr20 47748455 47748489 -18919516 + AT_rich Low_complexity Low_complexity 1 34 0 420 111 0 0 chr20 47748521 47748584 -18919421 + (TA)n Simple_repeat Simple_repeat 2 64 0 195 326 137 0 chr20 47748677 47748772 -18919233 + MIR3 SINE MIR 60 167 -41 1220 203 49 120 chr20 47748826 47749235 -18918770 - MLT1E LTR MaLR 0 593 214 479 17 17 0 chr20 47749267 47749327 -18918678 + (CA)n Simple_repeat Simple_repeat 1 61 0 764 115 0 18 chr20 47749352 47749465 -18918540 + FLAM_A SINE Alu 18 128 -14 503 282 15 8 chr20 47749478 47749609 -18918396 - MLT1E LTR MaLR -417 176 45 1834 138 3 64 chr20 47749614 47749940 -18918065 - AluJo SINE Alu -6 306 1 774 229 84 84 chr20 47751022 47751345 -18916660 + MER102a DNA MER1_type 5 327 -3 324 321 200 0 chr20 47751373 47751513 -18916492 - MIR3 SINE MIR -38 170 3 403 341 19 35 chr20 47751713 47751971 -18916034 + Charlie7 DNA MER1_type 36 289 -2323 639 252 104 16 chr20 47752453 47752738 -18915267 - MER115 DNA AcHobo 0 693 338 2027 231 73 73 chr20 47753125 47753241 -18914764 + Charlie7 DNA MER1_type 1722 1837 -775 2282 125 0 0 chr20 47753241 47753553 -18914452 - AluSq SINE Alu -1 312 1 2027 231 73 73 chr20 47753553 47754327 -18913678 + Charlie7 DNA MER1_type 1836 2612 0 3225 221 24 4 chr20 47754948 47755648 -18912357 - L1MC4a LINE L1 0 7808 7095 371 167 0 0 chr20 47755660 47755720 -18912285 - MIR SINE MIR -61 147 88 210 351 64 0 chr20 47755691 47755785 -18912220 + L2 LINE L2 2678 2777 -537 * 454 198 21 10 chr20 47755896 47755992 -18912013 + Charlie7 DNA MER1_type 1722 1818 -794 515 204 0 0 chr20 47755992 47756090 -18911915 + L2 LINE L2 3216 3313 0 949 290 91 28 chr20 47756342 47756738 -18911267 - MLT1K LTR MaLR -151 437 17 343 264 38 19 chr20 47756786 47756892 -18911113 - MER5B DNA MER1_type -70 108 1 1357 282 31 33 chr20 47757091 47757549 -18910456 + MLT1K LTR MaLR 128 584 -4 527 268 29 14 chr20 47757799 47757937 -18910068 - MER5A DNA MER1_type 0 189 50 1725 268 88 38 chr20 47757999 47758840 -18909165 + L1ME1 LINE L1 1254 2136 -4260 1506 152 22 27 chr20 47758846 47759158 -18908847 + MLT1B LTR MaLR 2 390 0 1358 239 58 10 chr20 47759191 47759611 -18908394 + L1ME1 LINE L1 2174 2567 -3648 2962 63 3 0 chr20 47759611 47759961 -18908044 + L1PA8 LINE L1 5819 6169 -3 280 274 11 11 chr20 47759972 47760067 -18907938 + L1ME1 LINE L1 4093 4187 -2028 2581 222 57 57 chr20 47760072 47760519 -18907486 + L1ME1 LINE L1 4896 5341 -894 2043 135 3 7 chr20 47760519 47760822 -18907183 + AluJb SINE Alu 1 302 -10 2581 222 57 57 chr20 47760822 47761588 -18906417 + L1ME1 LINE L1 5341 6117 -118 2375 103 0 0 chr20 47761588 47761899 -18906106 - AluY SINE Alu 0 311 1 2581 222 57 57 chr20 47761899 47762019 -18905986 + L1ME1 LINE L1 6117 6235 0 24 0 0 0 chr20 47762066 47762090 -18905915 + AT_rich Low_complexity Low_complexity 1 24 0 2210 128 0 6 chr20 47762322 47762635 -18905370 + AluSx SINE Alu 1 311 -1 549 305 47 27 chr20 47762771 47763069 -18904936 + L1ME2 LINE L1 1129 1432 -4991 267 256 122 0 chr20 47763071 47763161 -18904844 + L1ME2 LINE L1 1460 1560 -5381 8550 233 76 48 chr20 47763752 47767752 -18900253 + L1ME2 LINE L1 1706 5592 -1349 1062 119 0 182 chr20 47767752 47767988 -18900017 - 7SK RNA RNA 0 193 1 8550 233 76 48 chr20 47767988 47768054 -18899951 + L1ME2 LINE L1 5592 5655 -1286 2430 84 3 0 chr20 47768054 47768353 -18899652 + AluY SINE Alu 1 300 -11 8550 233 76 48 chr20 47768353 47768388 -18899617 + L1ME2 LINE L1 5655 5965 -976 1609 193 83 19 chr20 47768386 47768806 -18899199 + L1ME2 LINE L1 6504 6950 -9 * 552 237 20 10 chr20 47768828 47768979 -18899026 - MIR SINE MIR -64 144 24 1523 203 26 10 chr20 47769069 47769375 -18898630 - AluJo SINE Alu -1 311 1 441 229 61 15 chr20 47770514 47770645 -18897360 + L1ME4a LINE L1 5963 6099 -22 640 328 49 35 chr20 47770649 47771004 -18897001 - MLT1L LTR MaLR -13 602 239 2026 133 10 7 chr20 47771004 47771313 -18896692 - AluSx SINE Alu -2 310 1 640 328 49 35 chr20 47771313 47771362 -18896643 - MLT1L LTR MaLR -376 239 192 320 209 55 18 chr20 47771583 47771693 -18896312 + L1ME4a LINE L1 5947 6060 -61 204 125 0 0 chr20 47771693 47771725 -18896280 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 24 53 0 0 chr20 47771762 47771800 -18896205 + AT_rich Low_complexity Low_complexity 1 38 0 610 236 200 0 chr20 47771882 47772047 -18895958 - MIR SINE MIR -51 211 14 339 241 135 57 chr20 47772181 47772456 -18895549 - L1MC3 LINE L1 -391 5771 5620 22 0 0 0 chr20 47772546 47772568 -18895437 + AT_rich Low_complexity Low_complexity 1 22 0 235 178 22 0 chr20 47772715 47772760 -18895245 - L1ME3 LINE L1 -20 6142 6097 1840 144 7 11 chr20 47772760 47773072 -18894933 - AluSx SINE Alu 0 311 1 795 209 74 6 chr20 47773072 47773235 -18894770 - FRAM SINE Alu -7 169 1 2041 224 19 33 chr20 47773235 47773560 -18894445 - L1ME1 LINE L1 -60 6106 5789 3113 188 100 26 chr20 47773560 47774242 -18893763 + MER44D DNA MER2_type 1 604 -1 2041 224 19 33 chr20 47774242 47774434 -18893571 - L1ME1 LINE L1 -377 5789 5596 315 316 144 14 chr20 47774578 47774793 -18893212 + L3 LINE CR1 1311 1553 -24 279 0 0 0 chr20 47775234 47775265 -18892740 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 394 214 135 13 chr20 47775372 47775502 -18892503 + MIR SINE MIR 11 152 -65 279 210 16 0 chr20 47775521 47775583 -18892422 - MER69 DNA AcHobo -9 2517 2455 2119 121 7 0 chr20 47775598 47775895 -18892110 + AluSx SINE Alu 1 299 -13 495 242 48 0 chr20 47775902 47776026 -18891979 - MER69 DNA AcHobo -1088 138 9 715 233 84 25 chr20 47776134 47776336 -18891669 - MIR SINE MIR -35 227 14 210 319 125 19 chr20 47777264 47777480 -18890525 + L2 LINE L2 2722 2960 -354 1155 207 36 115 chr20 47777626 47778017 -18889988 + MLT1K LTR MaLR 229 588 0 253 312 145 72 chr20 47778017 47778293 -18889712 + L2 LINE L2 2967 3262 -10 415 370 12 17 chr20 47778342 47778515 -18889490 + MER117 DNA MER1_type 26 197 0 182 285 20 93 chr20 47778520 47778671 -18889334 + L2 LINE L2 3134 3273 -40 2408 70 3 0 chr20 47778969 47779267 -18888738 + AluY SINE Alu 1 299 -12 332 220 99 73 chr20 47779308 47779499 -18888506 + LTR33A LTR ERVL 20 180 -343 358 312 0 14 chr20 47779664 47779805 -18888200 + L1ME3A LINE L1 5811 5949 -221 1363 236 69 3 chr20 47780061 47780379 -18887626 + MER58B DNA MER1_type 2 340 -1 2409 68 0 0 chr20 47780431 47780723 -18887282 + AluY SINE Alu 1 292 -19 2761 106 79 20 chr20 47781144 47781508 -18886497 + MSTA LTR MaLR 1 393 -35 2630 62 0 0 chr20 47781508 47781816 -18886189 - AluY SINE Alu -3 308 1 2761 106 79 20 chr20 47781816 47781855 -18886150 + MSTA LTR MaLR 393 428 0 2164 180 75 8 chr20 47782357 47782758 -18885247 - MSTA LTR MaLR 0 428 1 1827 98 8 0 chr20 47782862 47783106 -18884899 - AluSx SINE Alu -9 303 58 449 276 70 40 chr20 47783659 47783858 -18884147 - MIR SINE MIR -56 206 2 897 226 98 0 chr20 47783876 47784080 -18883925 + MER58A DNA MER1_type 1 224 0 2752 200 30 4 chr20 47784439 47784468 -18883537 - L1MB3 LINE L1 -2 6181 6154 2009 128 3 39 chr20 47784468 47784774 -18883231 + AluSx SINE Alu 1 295 -17 225 0 0 0 chr20 47784774 47784799 -18883206 + (TA)n Simple_repeat Simple_repeat 2 26 0 2752 200 30 4 chr20 47784799 47785302 -18882703 - L1MB3 LINE L1 -28 6155 5634 442 244 67 22 chr20 47785314 47785449 -18882556 - L1ME3A LINE L1 0 6170 6030 586 161 0 54 chr20 47786049 47786161 -18881844 + FLAM_C SINE Alu 38 143 0 1199 234 87 21 chr20 47786161 47786550 -18881455 - MER113 DNA MER1_type? -48 473 59 606 146 0 10 chr20 47786610 47786713 -18881292 + MER53 DNA DNA 1 102 -87 2416 99 0 0 chr20 47787552 47787856 -18880149 - AluSx SINE Alu -8 304 1 728 255 13 60 chr20 47787881 47788042 -18879963 + MIR SINE MIR 22 170 -92 1448 219 56 7 chr20 47788042 47788330 -18879675 - AluJo SINE Alu 0 302 1 728 255 13 60 chr20 47788330 47788403 -18879602 + MIR SINE MIR 170 245 -17 299 299 31 0 chr20 47788523 47788620 -18879385 - MIR SINE MIR -56 206 107 988 269 81 42 chr20 47788654 47789126 -18878879 - MLT1H LTR MaLR -57 492 3 1942 135 10 19 chr20 47789428 47789740 -18878265 - AluSx SINE Alu -3 309 1 215 323 31 15 chr20 47789890 47790020 -18877985 + L2 LINE L2 2262 2393 -921 186 192 0 0 chr20 47790030 47790082 -18877923 + (CA)n Simple_repeat Simple_repeat 1 52 0 964 275 185 25 chr20 47790096 47790616 -18877389 + L2 LINE L2 2375 2977 -337 228 316 70 18 chr20 47791458 47791572 -18876433 + MIR SINE MIR 94 213 -49 276 146 61 85 chr20 47791695 47791777 -18876228 - MIR SINE MIR -153 109 30 505 262 19 43 chr20 47791794 47792004 -18876001 + MER113 DNA MER1_type? 2 206 -315 389 246 14 14 chr20 47792009 47792151 -18875854 + (TA)n Simple_repeat Simple_repeat 1 142 0 246 165 24 12 chr20 47792172 47792257 -18875748 + (TA)n Simple_repeat Simple_repeat 2 87 0 263 208 6 30 chr20 47792278 47792452 -18875553 + (TA)n Simple_repeat Simple_repeat 1 169 0 324 0 0 0 chr20 47792456 47792492 -18875513 + (TC)n Simple_repeat Simple_repeat 2 37 0 * 441 0 0 0 chr20 47792491 47792540 -18875465 + (TA)n Simple_repeat Simple_repeat 1 49 0 702 269 92 9 chr20 47792541 47792768 -18875237 + MER113 DNA MER1_type? 219 464 -57 194 61 0 30 chr20 47793080 47793090 -18874915 + (TTTCC)n Simple_repeat Simple_repeat 4 13 -22 1480 162 11 25 chr20 47793090 47793368 -18874637 - AluJb SINE Alu 0 312 39 194 61 0 30 chr20 47793368 47793390 -18874615 + (TTTCC)n Simple_repeat Simple_repeat 13 35 0 185 105 0 26 chr20 47793539 47793577 -18874428 + (GA)n Simple_repeat Simple_repeat 2 38 0 857 180 36 52 chr20 47793632 47793969 -18874036 + Charlie1 DNA MER1_type 49 2756 -5 371 252 0 19 chr20 47794920 47795023 -18872982 - MIR SINE MIR -6 256 156 277 217 17 0 chr20 47795021 47795081 -18872924 + MIR SINE MIR 12 72 -190 * 2009 212 79 55 chr20 47795081 47795684 -18872321 + MLT1G LTR MaLR 1 587 -3 506 243 76 22 chr20 47795687 47795872 -18872133 + MIR SINE MIR 68 262 0 1542 180 18 11 chr20 47796036 47796308 -18871697 - AluJo SINE Alu -38 274 1 479 238 19 0 chr20 47796310 47796415 -18871590 - Charlie8 DNA MER1_type -2208 209 103 631 153 25 92 chr20 47796645 47796808 -18871197 - MER106B DNA MER1_type -4 1055 904 574 214 36 21 chr20 47796865 47797050 -18870955 + MER106B DNA MER1_type 14 195 -864 2066 136 0 0 chr20 47797050 47797344 -18870661 + AluSx SINE Alu 1 294 -18 1799 204 37 61 chr20 47797516 47797577 -18870428 - MLT1D LTR MaLR -4 501 440 2353 97 7 0 chr20 47797577 47797886 -18870119 - AluSq SINE Alu 0 313 3 1799 204 37 61 chr20 47797886 47798333 -18869672 - MLT1D LTR MaLR -65 440 5 572 226 19 52 chr20 47798492 47798647 -18869358 - MER112 DNA MER1_type -109 151 2 715 274 80 24 chr20 47798651 47798863 -18869142 + MIR SINE MIR 5 228 -34 342 269 126 8 chr20 47799997 47800116 -18867889 + MIR SINE MIR 31 163 -99 225 363 62 0 chr20 47800188 47800301 -18867704 - L2 LINE L2 -32 3240 3121 1520 262 42 5 chr20 47800460 47800846 -18867159 - MLT1K LTR MaLR -63 525 126 237 276 26 13 chr20 47800875 47800951 -18867054 - MLT1K LTR MaLR -171 417 341 6640 78 36 6 chr20 47801291 47803156 -18864849 - L1PA14 LINE L1 -1 6160 4252 1572 185 133 52 chr20 47803360 47803840 -18864165 + MLT2B1 LTR ERVL 1 519 -1 426 306 65 25 chr20 47803841 47804040 -18863965 - MIR SINE MIR -7 255 49 369 284 108 56 chr20 47804094 47804344 -18863661 + L1ME4a LINE L1 3190 3452 -2694 1470 210 6 22 chr20 47804396 47804710 -18863295 + AluJo SINE Alu 1 309 -3 414 296 110 54 chr20 47804883 47805176 -18862829 + L1ME4a LINE L1 3712 3987 -2159 575 101 0 0 chr20 47805176 47805255 -18862750 + MADE1 DNA Mariner 1 79 -1 414 296 110 54 chr20 47805255 47805715 -18862290 + L1ME4a LINE L1 3987 4507 -1639 699 287 91 11 chr20 47805967 47806242 -18861763 + LTR33 LTR ERVL 38 334 -187 686 204 126 47 chr20 47806242 47806433 -18861572 + MER63A DNA MER1_type 1 206 -4 221 169 17 0 chr20 47806669 47806728 -18861277 + (TA)n Simple_repeat Simple_repeat 1 60 0 456 286 153 17 chr20 47806954 47807264 -18860741 + L1ME4a LINE L1 5245 5597 -573 533 94 0 203 chr20 47807298 47807346 -18860659 - AluSq/x SINE Alu -167 145 137 2268 99 0 0 chr20 47807346 47807650 -18860355 - AluSg SINE Alu -2 308 5 533 94 0 203 chr20 47807650 47807729 -18860276 - AluSq/x SINE Alu -175 137 44 186 43 0 0 chr20 47807758 47807781 -18860224 + (TAAA)n Simple_repeat Simple_repeat 4 26 0 318 328 31 31 chr20 47807784 47807979 -18860026 + L1ME4a LINE L1 5602 5796 -325 393 294 0 7 chr20 47808298 47808434 -18859571 - L1ME LINE L1 -311 5810 5676 536 252 68 59 chr20 47808504 47808726 -18859279 - L2 LINE L2 -99 3214 2991 426 259 126 23 chr20 47808744 47808781 -18859224 - L1ME4a LINE L1 -69 6052 6020 2177 89 10 13 chr20 47808781 47809085 -18858920 - AluSx SINE Alu -9 303 1 426 259 126 23 chr20 47809085 47809221 -18858784 - L1ME4a LINE L1 -101 6020 5861 602 257 65 64 chr20 47809223 47809522 -18858483 - L1ME4a LINE L1 -452 5669 5392 524 247 49 25 chr20 47809635 47809797 -18858208 - MIR3 SINE MIR -5 203 38 242 342 104 43 chr20 47810538 47810769 -18857236 + MIR SINE MIR 6 250 -12 1319 273 13 3 chr20 47810876 47811180 -18856825 + LTR16C LTR ERVL 79 385 -106 882 296 57 52 chr20 47811245 47811664 -18856341 + LTR16C LTR ERVL 71 491 0 21 0 0 0 chr20 47811743 47811764 -18856241 + AT_rich Low_complexity Low_complexity 1 21 0 974 253 56 0 chr20 47811835 47812068 -18855937 + MIR SINE MIR 17 262 0 281 151 19 0 chr20 47812080 47812133 -18855872 - L2 LINE L2 -949 2365 2312 262 224 0 0 chr20 47812795 47812844 -18855161 - MER96B DNA MER1_type? -179 238 190 1870 104 0 54 chr20 47812874 47813195 -18854810 - AluSg SINE Alu 0 305 1 267 31 0 0 chr20 47813195 47813227 -18854778 + (TTA)n Simple_repeat Simple_repeat 2 33 0 971 135 0 0 chr20 47813227 47813375 -18854630 - FRAM SINE Alu -30 146 1 1167 154 41 14 chr20 47813648 47813869 -18854136 + MER96B DNA MER1_type? 191 417 0 304 310 106 9 chr20 47814023 47814136 -18853869 + L1ME4a LINE L1 5787 5910 -211 495 276 15 8 chr20 47814203 47814337 -18853668 - MIR SINE MIR -125 137 3 2168 85 48 0 chr20 47814425 47814719 -18853286 + AluSx SINE Alu 1 308 -4 302 305 26 40 chr20 47814729 47814880 -18853125 + L1ME4a LINE L1 5966 6114 -7 430 302 135 16 chr20 47814880 47815072 -18852933 - MIR SINE MIR 0 262 48 843 125 0 1 chr20 47815104 47815344 -18852661 + AluJ SINE Alu 9 281 -31 28 48 0 0 chr20 47815959 47816001 -18852004 + GC_rich Low_complexity Low_complexity 1 42 0 615 39 0 13 chr20 47816404 47816482 -18851523 + MADE1 DNA Mariner 4 80 0 431 283 68 45 chr20 47816959 47817136 -18850869 + L2 LINE L2 2681 2861 -453 566 231 58 32 chr20 47817167 47817323 -18850682 - L2 LINE L2 -7 3306 3147 443 340 88 0 chr20 47817357 47817595 -18850410 + L2 LINE L2 2918 3176 -137 748 259 60 5 chr20 47817616 47817817 -18850188 + MLT1J2 LTR MaLR 51 262 -188 2080 117 13 0 chr20 47817842 47818150 -18849855 - AluSx SINE Alu 0 312 1 864 231 19 19 chr20 47818214 47818426 -18849579 + Charlie4a DNA MER1_type 21 232 -276 874 228 64 20 chr20 47818438 47818640 -18849365 - MER58A DNA MER1_type -9 215 5 734 237 96 12 chr20 47818644 47818893 -18849112 + Charlie4a DNA MER1_type 237 506 -2 406 233 153 68 chr20 47818901 47819064 -18848941 + MLT1J2 LTR MaLR 266 442 -8 339 222 62 0 chr20 47819075 47819156 -18848849 + L2 LINE L2 3194 3279 -34 203 284 15 15 chr20 47819620 47819687 -18848318 + C-rich Low_complexity Low_complexity 2 68 0 434 242 16 23 chr20 47819753 47819881 -18848124 + MIR SINE MIR 63 189 -73 1348 242 62 37 chr20 47820331 47820766 -18847239 + MLT1C LTR MaLR 1 605 -21 863 173 10 114 chr20 47820899 47821101 -18846904 + MER69 DNA AcHobo 3 183 -2343 531 305 61 9 chr20 47821222 47821435 -18846570 + MER69 DNA AcHobo 183 406 -820 672 262 0 6 chr20 47821456 47821620 -18846385 + MER69 DNA AcHobo 1917 2079 -447 2106 148 46 22 chr20 47821625 47821996 -18846009 + MLT1B LTR MaLR 1 380 -10 194 91 30 0 chr20 47822032 47822065 -18845940 + T-rich Low_complexity Low_complexity 3 36 0 362 150 195 62 chr20 47822065 47822178 -18845827 + MER69 DNA AcHobo 2153 2280 -246 * 406 168 17 101 chr20 47822171 47822253 -18845752 - MER69 DNA AcHobo -471 2055 1984 1991 116 0 13 chr20 47822253 47822554 -18845451 - AluSx SINE Alu 0 312 16 406 168 17 101 chr20 47822554 47822590 -18845415 - MER69 DNA AcHobo -542 1984 1947 540 163 189 21 chr20 47822609 47822799 -18845206 + MER69 DNA AcHobo 2304 2525 -1 258 198 0 31 chr20 47823193 47823289 -18844716 + CT-rich Low_complexity Low_complexity 3 95 0 757 283 186 38 chr20 47823318 47823742 -18844263 - L2 LINE L2 -1 3312 2826 583 233 42 42 chr20 47823918 47824398 -18843607 - MLT1K LTR MaLR -31 557 2 300 301 142 45 chr20 47824763 47825122 -18842883 + L1ME2 LINE L1 5535 5928 -236 437 295 175 11 chr20 47825421 47825689 -18842316 - MLT1L LTR MaLR 0 615 304 518 352 35 4 chr20 47825932 47826159 -18841846 - MIR SINE MIR -21 241 8 264 400 16 8 chr20 47826289 47826414 -18841591 + MIR SINE MIR 116 241 -21 343 257 43 14 chr20 47827090 47827230 -18840775 - LTR33 LTR ERVL -7 514 371 560 220 153 30 chr20 47827476 47827793 -18840212 + L2 LINE L2 65 3295 -18 376 315 20 35 chr20 47827837 47828034 -18839971 - L1ME LINE L1 -298 5823 5630 1284 303 73 42 chr20 47828384 47829129 -18838876 - L2 LINE L2 -1 3312 2538 1826 160 7 7 chr20 47829129 47829436 -18838569 - AluJo SINE Alu 0 312 6 1284 303 73 42 chr20 47829436 47829549 -18838456 - L2 LINE L2 -775 2538 2430 428 241 230 85 chr20 47830335 47830709 -18837296 + MLT1L LTR MaLR 3 321 -294 2067 73 0 60 chr20 47830709 47831010 -18836995 + AluY SINE Alu 17 299 -12 428 241 230 85 chr20 47831010 47831075 -18836930 + MLT1L LTR MaLR 321 375 -240 1131 186 33 14 chr20 47831075 47831290 -18836715 - MER20 DNA MER1_type 0 219 1 428 241 230 85 chr20 47831290 47831318 -18836687 + MLT1L LTR MaLR 375 539 -76 764 250 122 30 chr20 47831356 47831684 -18836321 + Charlie7 DNA MER1_type 10 367 -2245 435 257 45 5 chr20 47831690 47831835 -18836170 - MER20B DNA MER1_type -3 216 64 229 156 10 73 chr20 47831909 47831940 -18836065 + (TATATG)n Simple_repeat Simple_repeat 2 33 -58 1599 159 44 0 chr20 47831940 47832230 -18835775 - AluJo SINE Alu 0 302 1 229 156 10 73 chr20 47832230 47832293 -18835712 + (TATATG)n Simple_repeat Simple_repeat 33 91 0 551 217 9 0 chr20 47832335 47832441 -18835564 - MLT1E LTR MaLR -2 591 485 293 273 40 20 chr20 47832592 47832691 -18835314 - MLT1E LTR MaLR -452 141 41 583 281 86 32 chr20 47833114 47833552 -18834453 - L2 LINE L2 -1 3312 2271 280 329 166 53 chr20 47833588 47833944 -18834061 + L2 LINE L2 2918 3313 0 1291 224 85 58 chr20 47834005 47834451 -18833554 + LTR16C LTR ERVL 34 491 0 596 246 98 28 chr20 47834555 47834840 -18833165 - L2 LINE L2 -122 3191 2887 225 154 0 0 chr20 47834870 47834909 -18833096 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 245 200 33 0 chr20 47835719 47835779 -18832226 - MLT1K LTR MaLR -16 572 511 862 162 11 50 chr20 47835804 47835983 -18832022 - L1MB4 LINE L1 -8 6172 6001 2581 144 19 5 chr20 47836145 47836567 -18831438 + MSTA LTR MaLR 1 428 0 826 264 90 62 chr20 47836870 47837226 -18830779 + MLT1K LTR MaLR 208 573 -15 203 237 68 0 chr20 47837252 47837311 -18830694 + MIR3 SINE MIR 132 194 -14 409 273 34 43 chr20 47837529 47837738 -18830267 - L2 LINE L2 -351 2963 2757 232 237 29 0 chr20 47837845 47838018 -18829987 + (CA)n Simple_repeat Simple_repeat 2 179 0 448 244 25 0 chr20 47838031 47838482 -18829523 + (CA)n Simple_repeat Simple_repeat 1 462 0 183 186 0 0 chr20 47838585 47838628 -18829377 + (CA)n Simple_repeat Simple_repeat 1 43 0 204 67 22 44 chr20 47838752 47838797 -18829208 + (CA)n Simple_repeat Simple_repeat 2 45 0 1258 208 100 62 chr20 47839284 47839673 -18828332 + MLT1C LTR MaLR 51 454 -13 297 270 14 0 chr20 47839690 47839764 -18828241 + MIR SINE MIR 74 148 -60 232 279 168 35 chr20 47839774 47840116 -18827889 - L2 LINE L2 -2 3311 2848 1921 101 66 0 chr20 47840149 47840436 -18827569 - AluSx SINE Alu -6 306 1 492 254 28 7 chr20 47840906 47841048 -18826957 + MIR SINE MIR 48 192 -70 1657 100 0 0 chr20 47841351 47841602 -18826403 - AluSg/x SINE Alu 0 316 66 1162 287 66 37 chr20 47841652 47842140 -18825865 - L2 LINE L2 -6 3307 2806 1502 126 85 4 chr20 47843026 47843272 -18824733 + AluSx SINE Alu 1 266 -46 486 246 20 97 chr20 47843466 47843714 -18824291 - L2 LINE L2 -541 2773 2545 928 182 15 66 chr20 47844280 47844294 -18823711 - MER58A DNA MER1_type -2196 224 211 2323 71 0 3 chr20 47844294 47844589 -18823416 - AluSq SINE Alu -19 294 1 928 182 15 66 chr20 47844589 47844772 -18823233 - MER58A DNA MER1_type -2209 211 37 288 306 213 9 chr20 47844853 47844961 -18823044 + MIR3 SINE MIR 68 197 -11 2893 104 10 0 chr20 47845160 47845553 -18822452 + MER1A DNA MER1_type 133 529 0 287 233 111 0 chr20 47845663 47845753 -18822252 - MLT1K LTR MaLR -1 587 488 711 161 140 78 chr20 47845775 47845817 -18822188 + MER115 DNA AcHobo 474 512 -181 2055 130 3 0 chr20 47845817 47846124 -18821881 - AluSx SINE Alu -4 308 1 711 161 140 78 chr20 47846124 47846274 -18821731 + MER115 DNA AcHobo 512 678 -15 264 273 180 29 chr20 47846324 47846463 -18821542 + MIR SINE MIR 56 215 -47 1365 82 121 10 chr20 47846899 47847106 -18820899 + MER30 DNA MER1_type 1 230 0 349 248 152 0 chr20 47847193 47847298 -18820707 - MIR3 SINE MIR -7 201 81 244 240 0 0 chr20 47847477 47847527 -18820478 - L2 LINE L2 -13 3259 3210 866 206 148 0 chr20 47847930 47848139 -18819866 + MIR SINE MIR 11 250 -12 618 14 0 0 chr20 47848161 47848232 -18819773 + (TTTC)n Simple_repeat Simple_repeat 4 74 0 278 333 82 7 chr20 47848853 47848988 -18819017 - MIR3 SINE MIR -50 158 14 816 226 42 32 chr20 47849038 47849255 -18818750 + MER20 DNA MER1_type 1 219 0 257 264 167 42 chr20 47849280 47849424 -18818581 + MIR SINE MIR 89 250 -12 997 260 123 31 chr20 47850208 47850446 -18817559 + L2 LINE L2 2470 2685 -629 1671 140 14 25 chr20 47850446 47850731 -18817274 + AluJo SINE Alu 1 282 -30 207 0 0 0 chr20 47850734 47850757 -18817248 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 997 260 123 31 chr20 47850757 47850864 -18817141 + L2 LINE L2 2686 2851 -463 184 361 32 38 chr20 47850872 47851030 -18816975 + L2 LINE L2 2798 2954 -360 2074 151 0 0 chr20 47852179 47852477 -18815528 + AluJo SINE Alu 1 298 -14 1648 136 0 8 chr20 47853281 47853546 -18814459 - MER50 LTR ERV1 -37 697 435 1293 168 13 4 chr20 47853543 47853769 -18814236 - MER50 LTR ERV1 -504 230 3 * 1488 186 47 0 chr20 47853769 47854027 -18813978 - AluJo SINE Alu -42 270 1 246 231 0 0 chr20 47854268 47854320 -18813685 + MER106A DNA MER1_type 3 54 -182 2110 132 51 67 chr20 47854337 47854785 -18813220 - L1MB3 LINE L1 0 6183 5743 2172 117 14 0 chr20 47854796 47855086 -18812919 - AluSx SINE Alu -18 294 1 580 179 57 29 chr20 47855090 47855230 -18812775 + MER106B DNA MER1_type 896 1039 -20 * 934 202 31 0 chr20 47855229 47855422 -18812583 - MER20 DNA MER1_type -20 199 1 376 278 251 22 chr20 47855882 47856105 -18811900 - L2 LINE L2 0 3272 2999 1075 274 89 67 chr20 47856238 47856644 -18811361 + L2 LINE L2 2767 3190 -123 2478 107 55 0 chr20 47856644 47856989 -18811016 + THE1B LTR MaLR 1 364 0 1075 274 89 67 chr20 47856989 47857108 -18810897 + L2 LINE L2 3190 3305 -8 1828 138 29 7 chr20 47857109 47857412 -18810593 + AluJb SINE Alu 1 309 0 540 201 201 0 chr20 47857464 47857598 -18810407 - MER5A DNA MER1_type -25 164 4 226 222 37 0 chr20 47858578 47858632 -18809373 - Charlie8 DNA MER1_type -5 2412 2357 425 269 103 35 chr20 47858976 47859364 -18808641 - LTR33 LTR ERVL -2 519 33 408 275 111 41 chr20 47859628 47859799 -18808206 + MIR SINE MIR 47 229 -33 314 290 59 12 chr20 47860225 47860394 -18807611 + L1ME4a LINE L1 5694 5870 -251 630 276 209 34 chr20 47860952 47861339 -18806666 - L2 LINE L2 -6 3307 2853 280 319 68 58 chr20 47862300 47862507 -18805498 + L2 LINE L2 2856 3064 -249 852 197 39 34 chr20 47862952 47863160 -18804845 - MER3 DNA MER1_type 0 209 1 719 245 38 72 chr20 47863453 47863718 -18804287 - L2 LINE L2 -6 3307 3052 288 298 58 33 chr20 47863824 47863945 -18804060 + MIR3 SINE MIR 32 155 -53 698 249 46 25 chr20 47863949 47864190 -18803815 - MER112 DNA MER1_type -9 251 6 246 62 0 0 chr20 47864546 47864578 -18803427 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 344 286 143 0 chr20 47864586 47864684 -18803321 - L2 LINE L2 -19 3253 3142 267 209 59 105 chr20 47865134 47865287 -18802718 - MER5A DNA MER1_type -28 161 16 504 225 40 26 chr20 47865730 47865881 -18802124 + MIR SINE MIR 3 155 -107 417 242 65 65 chr20 47865923 47866076 -18801929 - L2 LINE L2 -38 3275 3123 732 306 92 17 chr20 47866107 47866522 -18801483 + L1MC5 LINE L1 7452 7897 -64 1159 276 66 20 chr20 47866553 47867110 -18800895 + L2 LINE L2 2734 3313 0 1995 121 84 28 chr20 47867454 47867809 -18800196 - THE1C LTR MaLR 0 375 1 2276 166 57 0 chr20 47868276 47868679 -18799326 + MSTB LTR MaLR 1 426 0 297 284 65 62 chr20 47868733 47869008 -18798997 + L1ME4a LINE L1 5844 6119 -2 310 261 0 0 chr20 47869390 47869459 -18798546 + MIR SINE MIR 82 150 -58 990 227 14 0 chr20 47869466 47869682 -18798323 - MER20 DNA MER1_type 0 219 1 181 254 51 68 chr20 47869809 47869927 -18798078 + MIR SINE MIR 16 131 -77 241 318 0 11 chr20 47870596 47870684 -18797321 - MIR SINE MIR -27 235 149 283 257 14 14 chr20 47870736 47870806 -18797199 - L2 LINE L2 -17 3296 3227 2287 243 30 18 chr20 47870807 47871466 -18796539 + L1ME1 LINE L1 5499 6165 -1 1622 251 122 16 chr20 47871468 47872287 -18795718 - L2 LINE L2 -81 3232 2349 350 353 7 7 chr20 47872279 47872418 -18795587 - MIR SINE MIR -104 158 20 * 232 205 0 0 chr20 47872482 47872521 -18795484 + MER5A DNA MER1_type 52 90 -99 2305 112 0 6 chr20 47872645 47872959 -18795046 + AluSx SINE Alu 1 312 0 571 292 97 32 chr20 47873077 47873447 -18794558 - MLT1L LTR MaLR -221 394 1 2606 58 0 0 chr20 47873589 47873897 -18794108 - AluSg SINE Alu -2 308 1 311 242 0 0 chr20 47874757 47874823 -18793182 - MER91B DNA MER1_type -124 66 1 183 320 0 0 chr20 47874969 47875019 -18792986 - L2 LINE L2 -1 3312 3263 427 286 42 83 chr20 47875027 47875244 -18792761 - MLT1K LTR MaLR -215 373 166 2247 100 123 50 chr20 47875752 47875926 -18792079 + MSTA LTR MaLR 1 161 -267 2649 65 0 0 chr20 47875926 47876234 -18791771 + AluSc SINE Alu 1 308 -1 2247 100 123 50 chr20 47876234 47876458 -18791547 + MSTA LTR MaLR 161 428 0 233 194 130 46 chr20 47878446 47878554 -18789451 + L1ME4a LINE L1 5961 6077 -44 22 0 0 0 chr20 47878558 47878580 -18789425 + AT_rich Low_complexity Low_complexity 1 22 0 2499 90 0 0 chr20 47878775 47879085 -18788920 - AluSx SINE Alu -2 310 1 270 171 0 0 chr20 47879222 47879263 -18788742 - AluJ/FRAM SINE Alu -33 269 229 462 231 16 0 chr20 47879270 47879391 -18788614 - Charlie8 DNA MER1_type -2260 157 35 192 77 0 0 chr20 47879727 47879753 -18788252 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 1042 256 80 109 chr20 47879753 47880627 -18787378 - L2 LINE L2 -13 3300 2458 1616 157 0 118 chr20 47880627 47880965 -18787040 - AluJo SINE Alu -14 298 1 1042 256 80 109 chr20 47880965 47881011 -18786994 - L2 LINE L2 -855 2458 2412 428 275 63 7 chr20 47881047 47881189 -18786816 + L1ME4a LINE L1 5961 6110 -11 2038 148 10 0 chr20 47881313 47881610 -18786395 - AluSx SINE Alu -12 300 1 641 129 10 0 chr20 47881742 47881843 -18786162 + LTR26 LTR ERV1 502 603 0 586 278 10 44 chr20 47883008 47883213 -18784792 - MIR SINE MIR -50 212 15 1374 219 87 34 chr20 47883596 47884035 -18783970 + MLT1C LTR MaLR 6 467 0 637 253 98 12 chr20 47884990 47885158 -18782847 - MER69 DNA AcHobo -30 2496 2299 339 96 0 0 chr20 47885158 47885210 -18782795 + (CAT)n Simple_repeat Simple_repeat 2 53 0 637 253 98 12 chr20 47885210 47885286 -18782719 - MER69 DNA AcHobo -227 2299 2231 198 0 0 0 chr20 47885343 47885365 -18782640 + (ATTG)n Simple_repeat Simple_repeat 2 23 0 2092 108 4 0 chr20 47885365 47885634 -18782371 - AluSx SINE Alu -29 283 14 308 264 169 14 chr20 47885653 47885801 -18782204 - LTR33 LTR ERVL -339 182 12 789 262 113 28 chr20 47886150 47886432 -18781573 - MLT1J LTR MaLR 0 511 206 1106 248 83 53 chr20 47886465 47886932 -18781073 - MLT1J LTR MaLR -30 481 1 660 236 18 6 chr20 47886946 47887111 -18780894 - MLT1J LTR MaLR -325 186 20 727 324 140 37 chr20 47887114 47887784 -18780221 - L2 LINE L2 -1886 1428 690 696 247 156 10 chr20 47887953 47888261 -18779744 - MER113 DNA MER1_type? -2 519 167 733 280 84 44 chr20 47888271 47888773 -18779232 + L2 LINE L2 2680 3189 -124 234 231 0 0 chr20 47888773 47888838 -18779167 + CT-rich Low_complexity Low_complexity 1 65 0 644 159 76 38 chr20 47888844 47888976 -18779029 + L2 LINE L2 3172 3308 -5 269 224 0 0 chr20 47888990 47889057 -18778948 - MER113 DNA MER1_type? -376 145 79 1873 172 10 0 chr20 47889275 47889578 -18778427 + AluJo SINE Alu 1 306 -6 1980 163 3 0 chr20 47889993 47890288 -18777717 - AluSx SINE Alu -16 296 1 554 259 23 115 chr20 47890376 47890719 -18777286 + Charlie8 DNA MER1_type 2 1401 -1016 724 115 105 115 chr20 47890873 47891082 -18776923 + MER63 DNA MER1_type 1 207 -854 2606 200 116 50 chr20 47891086 47892006 -18775999 + MER63C DNA MER1_type 81 930 0 402 326 34 0 chr20 47892354 47892501 -18775504 - MIR SINE MIR -109 153 2 328 338 124 7 chr20 47892534 47892679 -18775326 - MIR3 SINE MIR -6 202 41 1793 152 50 0 chr20 47892767 47893044 -18774961 + AluSx SINE Alu 21 311 -1 450 296 126 35 chr20 47893656 47893844 -18774161 + L2 LINE L2 2543 2713 -601 2595 119 67 2 chr20 47893844 47894246 -18773759 + MSTA LTR MaLR 1 428 0 450 296 126 35 chr20 47894246 47894453 -18773552 + L2 LINE L2 2713 2974 -340 303 239 34 23 chr20 47894558 47894646 -18773359 - L2 LINE L2 -2 3311 3223 397 251 76 95 chr20 47894717 47894980 -18773025 + L2 LINE L2 3056 3313 0 575 205 85 50 chr20 47895861 47896193 -18771812 + MLT1J LTR MaLR 1 408 -103 203 269 91 69 chr20 47896341 47896516 -18771489 + L3 LINE CR1 1320 1498 -79 1268 242 56 65 chr20 47896600 47897139 -18770866 + L2 LINE L2 2776 3313 0 2643 17 40 3 chr20 47897392 47897692 -18770313 + AluY SINE Alu 1 311 0 2298 97 0 44 chr20 47898397 47898717 -18769288 + AluJb SINE Alu 1 306 -6 211 272 228 22 chr20 47899064 47899200 -18768805 + MIR3 SINE MIR 16 179 -29 294 164 0 0 chr20 47899200 47899255 -18768750 + CT-rich Low_complexity Low_complexity 2 56 0 2268 110 16 7 chr20 47899706 47900015 -18767990 + AluSx SINE Alu 1 312 0 363 304 11 0 chr20 47900614 47900706 -18767299 + MER81 DNA DNA 15 107 -7 486 194 70 31 chr20 47900744 47900873 -18767132 - MER69A DNA AcHobo -9 168 35 1043 175 4 15 chr20 47902330 47902990 -18765015 + (TCCA)n Simple_repeat Simple_repeat 1 652 0 760 284 198 0 chr20 47902991 47903339 -18764666 - L2 LINE L2 0 3313 2897 528 264 174 0 chr20 47903348 47903515 -18764490 - MIR SINE MIR -2 260 65 430 274 75 16 chr20 47903556 47903742 -18764263 - L2 LINE L2 -416 2898 2702 22 0 0 0 chr20 47903782 47903804 -18764201 + AT_rich Low_complexity Low_complexity 1 22 0 689 254 103 113 chr20 47903852 47904328 -18763677 + MLT1J LTR MaLR 27 497 -14 261 209 149 0 chr20 47904472 47904539 -18763466 - Charlie8 DNA MER1_type -2141 276 200 304 315 0 0 chr20 47904575 47904664 -18763341 - MIR SINE MIR 0 262 174 849 183 97 0 chr20 47904916 47905091 -18762914 + LTR47A LTR ERVL 261 452 0 288 281 0 0 chr20 47905093 47905157 -18762848 - MIR SINE MIR -89 173 110 481 286 76 12 chr20 47905157 47905328 -18762677 - Charlie8 DNA MER1_type -2234 183 2 756 273 31 26 chr20 47905587 47905814 -18762191 + MLT1K LTR MaLR 361 588 0 210 269 30 15 chr20 47905974 47906041 -18761964 + MIR SINE MIR 52 119 -89 482 261 188 32 chr20 47906041 47906457 -18761548 + MLT1H LTR MaLR 1 543 -6 369 238 68 82 chr20 47907125 47907272 -18760733 + MIR SINE MIR 58 202 -60 491 245 48 14 chr20 47907308 47907455 -18760550 + MIR SINE MIR 1 152 -110 2326 106 48 28 chr20 47907618 47907975 -18760030 + THE1B LTR MaLR 1 364 0 1815 164 0 19 chr20 47908240 47908552 -18759453 + AluJo SINE Alu 1 306 -6 304 268 72 58 chr20 47908678 47909025 -18758980 + L1M4 LINE L1 2930 3281 -2865 1777 157 13 3 chr20 47909082 47909381 -18758624 - AluJb SINE Alu -9 303 2 407 259 68 104 chr20 47909524 47909637 -18758368 - L1MDa LINE L1 -3893 2647 2531 2031 128 3 0 chr20 47909637 47909941 -18758064 + AluSx SINE Alu 1 305 -7 407 259 68 104 chr20 47909941 47910105 -18757900 - L1MDa LINE L1 -4009 2531 2404 605 230 75 30 chr20 47910153 47910284 -18757721 + MER3 DNA MER1_type 1 125 -84 1989 123 7 13 chr20 47910284 47910585 -18757420 - AluSx SINE Alu -13 299 1 207 0 0 0 chr20 47910591 47910614 -18757391 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 605 230 75 30 chr20 47910614 47910675 -18757330 + MER3 DNA MER1_type 129 209 0 435 249 121 17 chr20 47910802 47910869 -18757136 - MIR SINE MIR -1 261 202 2134 107 3 3 chr20 47910869 47911168 -18756837 + AluSx SINE Alu 1 299 -13 435 249 121 17 chr20 47911168 47911273 -18756732 - MIR SINE MIR -60 202 71 1297 159 0 9 chr20 47911273 47911493 -18756512 + AluJo SINE Alu 86 303 -9 249 315 0 0 chr20 47911496 47911569 -18756436 - MIR SINE MIR -185 77 5 181 352 11 34 chr20 47911506 47911594 -18756411 + MIR SINE MIR 24 109 -99 * 216 0 0 0 chr20 47912064 47912088 -18755917 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 486 295 163 13 chr20 47912106 47912333 -18755672 - MIR SINE MIR 0 262 2 300 257 133 76 chr20 47912859 47913206 -18754799 + MLT1K LTR MaLR 48 479 -109 190 267 79 40 chr20 47913457 47913558 -18754447 + L2 LINE L2 3168 3272 0 916 267 132 12 chr20 47913634 47914201 -18753804 + L2 LINE L2 2670 3304 -9 180 77 0 0 chr20 47914203 47914229 -18753776 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 1872 164 6 3 chr20 47914367 47914720 -18753285 + AluSx SINE Alu 1 354 0 742 282 34 5 chr20 47915151 47915360 -18752645 - MIR SINE MIR -20 242 28 186 393 19 0 chr20 47915380 47915487 -18752518 - MIR SINE MIR 0 262 154 209 184 41 0 chr20 47915780 47915829 -18752176 + MIR SINE MIR 81 131 -77 507 245 95 0 chr20 47915939 47916086 -18751919 + MIR SINE MIR 13 173 -89 817 293 133 28 chr20 47916117 47916163 -18751842 + L2 LINE L2 2670 2710 -603 1937 91 59 0 chr20 47916163 47916449 -18751556 + AluSc SINE Alu 1 303 -6 817 293 133 28 chr20 47916449 47916974 -18751031 + L2 LINE L2 2710 3293 -20 195 207 66 116 chr20 47917097 47917218 -18750787 + L2 LINE L2 3180 3294 -19 545 294 163 46 chr20 47918127 47918631 -18749374 - L2 LINE L2 -2 3311 2734 180 352 132 0 chr20 47918660 47918751 -18749254 - L2 LINE L2 -679 2635 2533 472 268 46 33 chr20 47918768 47918921 -18749084 - L2 LINE L2 -917 2397 2243 415 233 27 13 chr20 47919230 47919389 -18748616 + MLT1G LTR MaLR 23 250 -340 * 1505 271 41 53 chr20 47919388 47919949 -18748056 + MLT1E LTR MaLR 40 593 0 2211 189 58 118 chr20 47920159 47920932 -18747073 + LTR8A LTR ERV1 1 727 0 635 119 280 28 chr20 47921167 47921310 -18746695 - MER53 DNA DNA -9 180 2 2086 131 144 60 chr20 47921316 47921766 -18746239 + LTR54 LTR ERV1 23 510 0 864 182 18 0 chr20 47922037 47922202 -18745803 - FAM SINE Alu -8 41 1 3067 145 9 49 chr20 47922203 47922756 -18745249 + LTR26B LTR ERV1 1 531 0 2146 116 7 0 chr20 47922784 47923094 -18744911 - AluSx SINE Alu 0 312 1 310 156 0 0 chr20 47923395 47923440 -18744565 + L1MC4 LINE L1 6659 6703 -1339 408 245 0 106 chr20 47923449 47923462 -18744543 - L1MA10 LINE L1 -11 6323 6310 2531 132 44 3 chr20 47923462 47923849 -18744156 - MER57A LTR ERV1 0 403 1 408 245 0 106 chr20 47923849 47923986 -18744019 - L1MA10 LINE L1 -24 6310 6189 364 224 22 142 chr20 47923986 47924053 -18743952 + L2 LINE L2 3147 3220 -93 1681 176 14 10 chr20 47924053 47924348 -18743657 - AluJb SINE Alu -16 296 1 364 224 22 142 chr20 47924348 47924463 -18743542 + L2 LINE L2 3220 3307 -6 321 194 0 185 chr20 47924554 47924662 -18743343 - Charlie8 DNA MER1_type -1 2416 253 978 179 17 17 chr20 47924700 47924879 -18743126 + MER58A DNA MER1_type 42 220 -4 1655 159 4 4 chr20 47924900 47925177 -18742828 + AluJb SINE Alu 2 278 -34 935 255 167 7 chr20 47925768 47926074 -18741931 - MLT1K LTR MaLR -6 582 228 1349 213 70 82 chr20 47926217 47926785 -18741220 - L2 LINE L2 -2 3311 2777 295 274 40 48 chr20 47926869 47926993 -18741012 + LTR33 LTR ERVL 330 452 -69 206 268 18 18 chr20 47927196 47927252 -18740753 - MIR3 SINE MIR -44 164 109 823 191 180 0 chr20 47927260 47927443 -18740562 - MER20 DNA MER1_type -3 216 1 605 308 63 17 chr20 47927523 47927760 -18740245 + MLT1J LTR MaLR 252 499 -12 827 304 60 8 chr20 47928213 47928463 -18739542 + MLT1K LTR MaLR 17 279 -309 2089 188 26 70 chr20 47928472 47928590 -18739415 + MLT1D LTR MaLR 1 123 -382 1954 120 0 27 chr20 47928590 47928891 -18739114 + AluSx SINE Alu 1 293 -19 2089 188 26 70 chr20 47928891 47929018 -18738987 + MLT1D LTR MaLR 123 254 -251 2610 136 24 9 chr20 47929018 47929437 -18738568 + MSTB LTR MaLR 2 426 0 2089 188 26 70 chr20 47929437 47929657 -18738348 + MLT1D LTR MaLR 254 444 -61 1645 148 13 46 chr20 47929657 47929962 -18738043 + AluJb SINE Alu 1 295 -17 2089 188 26 70 chr20 47929962 47930022 -18737983 + MLT1D LTR MaLR 444 505 0 610 255 165 14 chr20 47930263 47930615 -18737390 + LTR16C LTR ERVL 5 420 -71 1393 144 0 13 chr20 47930624 47930860 -18737145 + AluJo SINE Alu 74 306 -6 304 339 39 8 chr20 47930876 47931006 -18736999 - L2 LINE L2 -453 2861 2728 310 336 115 0 chr20 47931431 47931553 -18736452 - MIR SINE MIR -20 242 107 518 272 92 71 chr20 47931711 47932008 -18735997 + MLT1L LTR MaLR 203 511 -104 2004 128 0 3 chr20 47932008 47932306 -18735699 - AluSq SINE Alu -16 297 1 518 272 92 71 chr20 47932306 47932401 -18735604 + MLT1L LTR MaLR 511 603 -12 848 214 46 13 chr20 47932412 47932607 -18735398 + MLT1J LTR MaLR 9 202 -313 244 199 44 44 chr20 47932715 47932818 -18735187 + MLT1I LTR MaLR 310 446 0 718 234 24 6 chr20 47933029 47933196 -18734809 - MIR SINE MIR 0 262 93 * 1004 217 136 78 chr20 47933189 47933330 -18734675 + L2 LINE L2 2891 3022 -291 1318 173 70 30 chr20 47933330 47933630 -18734375 + AluJo SINE Alu 1 312 0 1004 217 136 78 chr20 47933630 47933672 -18734333 + L2 LINE L2 3022 3060 -253 570 195 7 114 chr20 47933672 47933737 -18734268 + MER94 DNA DNA 1 43 -91 2091 110 0 7 chr20 47933737 47934027 -18733978 + AluSx SINE Alu 3 290 -22 570 195 7 114 chr20 47934027 47934110 -18733895 + MER94 DNA DNA 43 133 -1 1004 217 136 78 chr20 47934110 47934321 -18733684 + L2 LINE L2 3060 3309 -4 360 318 92 23 chr20 47934757 47934974 -18733031 + L1MC4a LINE L1 5498 5729 -392 5658 141 42 17 chr20 47934997 47936689 -18731316 + L1MA8 LINE L1 4532 6269 -22 539 182 0 0 chr20 47936689 47936788 -18731217 + MER21B LTR ERV1 414 512 -351 239 314 16 25 chr20 47936840 47936961 -18731044 + L1MC4a LINE L1 5814 5933 -1875 280 255 96 0 chr20 47938404 47938498 -18729507 + MIR SINE MIR 33 135 -127 831 227 62 40 chr20 47938573 47938798 -18729207 + MIR SINE MIR 33 262 0 397 270 40 24 chr20 47938855 47938981 -18729024 - MIR SINE MIR -127 135 8 299 276 27 40 chr20 47939299 47939416 -18728589 - MIR SINE MIR -64 144 38 1827 108 79 11 chr20 47939507 47939786 -18728219 - AluSx SINE Alu -14 298 1 289 196 272 22 chr20 47940816 47940908 -18727097 - MER113 DNA MER1_type? -58 463 349 424 206 211 40 chr20 47940977 47941152 -18726853 - MER112 DNA MER1_type -48 212 8 338 183 346 34 chr20 47941186 47941394 -18726611 - MER113 DNA MER1_type? -238 283 11 202 295 0 16 chr20 47941554 47941615 -18726390 - L2 LINE L2 -5 3267 3208 285 254 32 0 chr20 47941615 47941678 -18726327 - L2 LINE L2 -39 3233 3169 21 0 0 0 chr20 47941686 47941707 -18726298 + AT_rich Low_complexity Low_complexity 1 21 0 506 177 83 0 chr20 47941710 47941806 -18726199 - L1MA9 LINE L1 -50 6262 6159 * 992 187 52 20 chr20 47941796 47942047 -18725958 - L1M4 LINE L1 -3105 3041 2783 472 249 233 0 chr20 47942222 47942411 -18725594 - MIR SINE MIR -17 245 13 188 255 0 39 chr20 47942621 47942644 -18725361 - L2 LINE L2 -3 3310 3288 2647 86 36 0 chr20 47942644 47943006 -18724999 + THE1C LTR MaLR 1 375 0 188 255 0 39 chr20 47943006 47943033 -18724972 - L2 LINE L2 -25 3288 3262 524 264 190 14 chr20 47943199 47943483 -18724522 - L2 LINE L2 -415 2899 2566 1687 206 56 86 chr20 47943545 47944175 -18723830 - LTR9 LTR ERV1 -1 611 1 345 160 184 64 chr20 47944501 47944626 -18723379 - MIR SINE MIR -77 185 46 457 181 24 0 chr20 47944677 47944760 -18723245 - MIR SINE MIR -118 144 60 316 136 186 0 chr20 47945059 47945118 -18722887 - MER58A DNA MER1_type -31 76 7 475 167 176 0 chr20 47945118 47945220 -18722785 - MER96B DNA MER1_type? -295 122 3 2315 142 57 20 chr20 47945281 47945694 -18722311 + MSTC LTR MaLR 1 428 0 207 254 0 36 chr20 47945827 47945937 -18722068 + CT-rich Low_complexity Low_complexity 1 106 0 234 228 18 18 chr20 47945983 47946040 -18721965 - L2 LINE L2 0 3272 3216 190 289 39 0 chr20 47946054 47946106 -18721899 + MIR3 SINE MIR 140 193 -15 253 210 188 62 chr20 47946220 47946396 -18721609 + L2 LINE L2 2650 2847 -467 * 331 307 15 15 chr20 47946312 47946449 -18721556 + MIR SINE MIR 48 184 -78 883 278 68 50 chr20 47946449 47946891 -18721114 - LTR16A LTR ERVL 0 450 1 533 204 28 9 chr20 47947087 47947195 -18720810 - MER5A DNA MER1_type -60 129 20 392 263 11 11 chr20 47947265 47947360 -18720645 - MIR SINE MIR -102 160 66 1894 134 3 3 chr20 47947399 47947683 -18720322 - AluSx SINE Alu -15 297 14 1721 59 5 5 chr20 47947697 47947916 -18720089 - AluY SINE Alu -19 292 74 938 107 0 8 chr20 47947916 47948047 -18719958 - AluSq/x SINE Alu -182 130 1 382 292 104 84 chr20 47948142 47948157 -18719848 + MLT1L LTR MaLR 194 207 -408 2533 136 31 14 chr20 47948157 47948576 -18719429 - MSTB LTR MaLR 0 426 1 382 292 104 84 chr20 47948576 47948974 -18719031 + MLT1L LTR MaLR 207 615 0 421 284 40 40 chr20 47949105 47949253 -18718752 + MIR3 SINE MIR 13 160 -48 602 232 156 46 chr20 47949375 47949612 -18718393 + Charlie8 DNA MER1_type 108 370 -2047 554 275 30 38 chr20 47949663 47949899 -18718106 + L2 LINE L2 2304 2537 -777 686 238 19 24 chr20 47949900 47950106 -18717899 + L1ME3A LINE L1 5961 6165 -5 1994 110 24 0 chr20 47950110 47950400 -18717605 + AluSx SINE Alu 1 297 -15 273 311 98 18 chr20 47950406 47950570 -18717435 + L2 LINE L2 2542 2718 -596 806 135 0 8 chr20 47950571 47950704 -18717301 + FRAM SINE Alu 1 132 -44 180 111 0 0 chr20 47950738 47950765 -18717240 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 944 140 0 0 chr20 47950767 47950910 -18717095 + FLAM_C SINE Alu 1 143 0 648 250 20 20 chr20 47950911 47951111 -18716894 + L1ME3A LINE L1 5966 6165 -5 1998 114 24 0 chr20 47951115 47951405 -18716600 + AluSx SINE Alu 1 297 -15 307 299 98 18 chr20 47951411 47951575 -18716430 + L2 LINE L2 2542 2718 -596 846 145 28 45 chr20 47951576 47951755 -18716250 + FRAM SINE Alu 1 40 0 1933 130 0 55 chr20 47951776 47952106 -18715899 + AluSx SINE Alu 1 312 0 1121 262 100 20 chr20 47952146 47952597 -18715408 + L2 LINE L2 2827 3313 0 291 28 0 0 chr20 47952681 47952717 -18715288 + (CA)n Simple_repeat Simple_repeat 2 37 0 762 268 49 22 chr20 47953224 47953448 -18714557 + L2 LINE L2 3082 3311 -2 440 274 202 54 chr20 47953504 47953876 -18714129 - L2 LINE L2 -1 3312 2886 235 180 40 0 chr20 47953949 47953999 -18714006 + MIR SINE MIR 199 250 -12 281 273 73 18 chr20 47954167 47954277 -18713728 - MIR SINE MIR -81 181 66 1899 253 84 4 chr20 47954281 47954780 -18713225 - MLT1H1 LTR MaLR -16 539 1 523 248 38 23 chr20 47954798 47954931 -18713074 + L2 LINE L2 3138 3272 0 182 354 24 0 chr20 47955109 47955191 -18712814 - L2 LINE L2 -36 3236 3153 312 246 26 50 chr20 47955559 47955709 -18712296 + LTR16A LTR ERVL 184 374 -76 1452 285 56 2 chr20 47955855 47956266 -18711739 - LTR16A LTR ERVL 0 450 18 258 284 57 23 chr20 47956415 47956503 -18711502 - MLT1L LTR MaLR -133 482 392 527 218 122 69 chr20 47956539 47956952 -18711053 - MLT1H LTR MaLR -54 501 20 674 235 92 25 chr20 47956961 47957157 -18710848 - MLT1J LTR MaLR -196 315 107 487 174 12 0 chr20 47957381 47957467 -18710538 - Tigger5 DNA MER2_type 0 2323 2237 462 267 44 9 chr20 47957784 47957968 -18710037 + MIR SINE MIR 1 250 -12 392 242 55 0 chr20 47958221 47958312 -18709693 + MIR SINE MIR 53 148 -114 7792 115 75 2 chr20 47958393 47959574 -18708431 - Tigger1 DNA MER2_type -1126 1292 26 228 286 143 10 chr20 47959583 47959681 -18708324 - MIR SINE MIR -104 158 48 306 206 15 0 chr20 47959724 47959792 -18708213 + MIR SINE MIR 169 237 -25 905 269 72 36 chr20 47960334 47960518 -18707487 + MER113 DNA MER1_type? 5 181 -340 1925 159 0 0 chr20 47960518 47960878 -18707127 + AluJb SINE Alu 1 312 0 905 269 72 36 chr20 47960878 47961191 -18706814 + MER113 DNA MER1_type? 181 520 -1 541 293 21 0 chr20 47961221 47961361 -18706644 + L2 LINE L2 2472 2614 -700 3747 168 20 8 chr20 47961377 47962039 -18705966 + L1MB8 LINE L1 5451 6120 -58 1033 164 0 0 chr20 47962042 47962207 -18705798 - AluJ SINE Alu -16 296 132 274 169 0 34 chr20 47962219 47962278 -18705727 + L1MB8 LINE L1 6122 6178 0 715 301 125 39 chr20 47962278 47962832 -18705173 + L2 LINE L2 2702 3293 -20 843 151 72 12 chr20 47963103 47963269 -18704736 + MER5B DNA MER1_type 1 176 -2 1010 236 52 4 chr20 47963492 47963742 -18704263 + MIR SINE MIR 1 262 0 1890 148 3 7 chr20 47963862 47964160 -18703845 - AluJo SINE Alu -15 297 1 720 159 23 38 chr20 47964182 47964314 -18703691 - AluJ SINE Alu -172 130 1 404 285 35 60 chr20 47964993 47965277 -18702728 + L1MCc LINE L1 17 293 -6130 1685 251 64 83 chr20 47966051 47967255 -18700750 + L1MCc LINE L1 1232 2622 -4500 587 259 61 25 chr20 47967264 47967461 -18700544 + MER63A DNA MER1_type 1 204 -6 1727 160 6 28 chr20 47967568 47967887 -18700118 - AluJb SINE Alu 0 312 1 1587 244 28 17 chr20 47967890 47968568 -18699437 + L1MCc LINE L1 2696 3344 -3597 867 118 0 0 chr20 47968669 47968788 -18699217 - FLAM_C SINE Alu -24 119 1 1047 264 26 24 chr20 47968809 47969150 -18698855 - L1ME1 LINE L1 -5 6161 5820 1563 219 59 25 chr20 47969155 47969318 -18698687 + L1MDa LINE L1 704 860 -5680 2181 144 98 5 chr20 47969318 47969706 -18698299 + MSTB LTR MaLR 1 424 -2 1563 219 59 25 chr20 47969706 47969934 -18698071 + L1MDa LINE L1 860 1108 -5432 1001 153 12 0 chr20 47969935 47970098 -18697907 - AluSx SINE Alu -16 296 132 281 111 0 56 chr20 47970194 47970248 -18697757 - AluSx SINE Alu -169 133 83 1403 189 69 35 chr20 47970295 47970671 -18697334 + L1MDa LINE L1 1226 1614 -4926 414 162 48 19 chr20 47970727 47971046 -18696959 + (TATAG)n Simple_repeat Simple_repeat 1 328 0 227 206 56 37 chr20 47971068 47971175 -18696830 + (CAGTA)n Simple_repeat Simple_repeat 4 112 0 308 187 32 89 chr20 47971175 47971298 -18696707 + L1MC4 LINE L1 6588 6703 -1339 365 191 21 53 chr20 47971313 47971407 -18696598 - L1MC4 LINE L1 -1338 6704 6614 280 143 71 0 chr20 47971415 47971527 -18696478 + (TATAG)n Simple_repeat Simple_repeat 2 121 0 29 70 0 0 chr20 47971539 47971596 -18696409 + AT_rich Low_complexity Low_complexity 1 57 0 969 114 7 20 chr20 47971604 47971753 -18696252 + L1M3 LINE L1 5660 5806 -377 203 136 30 30 chr20 47971780 47971846 -18696159 + (TA)n Simple_repeat Simple_repeat 1 66 0 723 95 0 0 chr20 47971848 47971943 -18696062 + MSTA LTR MaLR 274 368 -60 312 330 0 11 chr20 47971956 47972047 -18695958 - L1MC4 LINE L1 -1339 6703 6614 * 363 297 51 8 chr20 47971985 47972103 -18695902 + L1MC4 LINE L1 6579 6701 -1341 1738 150 72 42 chr20 47972104 47972490 -18695515 + L1MC/D LINE L1 1611 2008 -4532 2069 117 0 3 chr20 47972491 47972790 -18695215 + AluSq SINE Alu 1 298 -15 897 180 109 19 chr20 47972790 47973046 -18694959 + L1MC/D LINE L1 2133 2411 -4129 * 3935 143 58 20 chr20 47973020 47973755 -18694250 + L1MB3 LINE L1 5692 6454 -123 2213 203 19 19 chr20 47973737 47973756 -18694249 + L1MC/D LINE L1 5417 5434 -1202 * 1605 39 0 39 chr20 47973756 47973961 -18694044 - MER107 DNA MER1_type 0 197 1 2213 203 19 19 chr20 47973961 47974582 -18693423 + L1MC/D LINE L1 5434 6059 -577 1753 100 41 75 chr20 47974627 47974947 -18693058 + AluSg SINE Alu 1 309 -1 617 239 128 41 chr20 47974965 47975066 -18692939 - MIR SINE MIR -10 252 161 2787 83 0 5 chr20 47975066 47975439 -18692566 - L1PA13 LINE L1 -5 6158 5788 617 239 128 41 chr20 47975439 47975555 -18692450 - MIR SINE MIR -101 161 16 250 262 0 48 chr20 47975561 47975645 -18692360 - MIR SINE MIR -110 152 73 1568 147 53 0 chr20 47976272 47976537 -18691468 - AluJo SINE Alu -32 280 2 736 212 11 49 chr20 47976612 47976796 -18691209 + MIR SINE MIR 71 247 -15 577 303 73 5 chr20 47976845 47977063 -18690942 - MIR SINE MIR -10 252 20 465 227 144 0 chr20 47977883 47978015 -18689990 - MER69A DNA AcHobo 0 177 27 685 251 37 37 chr20 47978143 47978334 -18689671 - MIR SINE MIR -14 248 58 447 19 0 0 chr20 47978354 47978406 -18689599 + (TG)n Simple_repeat Simple_repeat 1 52 0 1725 145 0 0 chr20 47978417 47978686 -18689319 - AluJb SINE Alu -30 282 14 318 87 0 22 chr20 47979062 47979108 -18688897 - MER75 DNA T2_type -1 503 459 733 259 65 11 chr20 47980096 47980281 -18687724 + MER91A DNA MER1_type 1 195 -1 263 274 199 14 chr20 47980410 47980556 -18687449 + MIR SINE MIR 29 201 -61 282 196 0 0 chr20 47980607 47980658 -18687347 - MIR SINE MIR -110 152 102 250 345 130 15 chr20 47980665 47980865 -18687140 + MIR SINE MIR 21 243 -19 554 259 44 6 chr20 47980891 47981049 -18686956 - MIR SINE MIR -25 237 74 184 209 60 45 chr20 47981186 47981253 -18686752 - MIR SINE MIR -17 245 178 827 250 54 82 chr20 47981313 47981737 -18686268 + MER113 DNA MER1_type? 16 427 -94 2097 214 52 10 chr20 47981930 47982415 -18685590 + MLT1D LTR MaLR 1 505 0 451 319 25 0 chr20 47982624 47982781 -18685224 + MIR SINE MIR 49 209 -53 518 266 35 0 chr20 47982936 47983079 -18684926 + MIR SINE MIR 113 260 -2 319 248 152 24 chr20 47983112 47983237 -18684768 - MIR3 SINE MIR -49 159 19 23 0 0 0 chr20 47983256 47983279 -18684726 + AT_rich Low_complexity Low_complexity 1 23 0 1583 181 21 0 chr20 47983279 47983560 -18684445 - AluJb SINE Alu -25 287 1 1283 242 47 100 chr20 47983728 47984257 -18683748 + L2 LINE L2 2812 3312 -1 354 290 60 30 chr20 47984265 47984465 -18683540 - MIR SINE MIR -34 228 23 265 316 129 34 chr20 47984831 47985040 -18682965 - MIR SINE MIR -6 256 28 2105 184 86 27 chr20 47985078 47985599 -18682406 - MER74A LTR ERVL 0 558 7 952 286 80 34 chr20 47985607 47986055 -18681950 + L2 LINE L2 2841 3309 -4 227 234 172 62 chr20 47986153 47986281 -18681724 - MIR3 SINE MIR -54 154 13 298 246 0 0 chr20 47986653 47986714 -18681291 + MIR SINE MIR 94 154 -108 832 273 25 16 chr20 47987204 47987446 -18680559 - MIR SINE MIR -4 258 15 461 250 24 38 chr20 47987471 47987601 -18680404 - MIR SINE MIR -63 145 21 583 212 0 53 chr20 47987799 47987831 -18680174 + MIR SINE MIR 33 65 -197 2150 82 9 61 chr20 47987831 47988160 -18679845 - AluSx SINE Alu 0 312 1 583 212 0 53 chr20 47988160 47988259 -18679746 + MIR SINE MIR 65 157 -105 1039 171 36 0 chr20 47988364 47988557 -18679448 + MER20 DNA MER1_type 20 219 0 286 318 70 8 chr20 47988563 47988692 -18679313 - MIR SINE MIR -61 201 65 1016 245 34 8 chr20 47989473 47989710 -18678295 + MIR SINE MIR 19 261 -1 329 234 146 51 chr20 47989799 47989936 -18678069 + MIR SINE MIR 54 203 -59 2225 92 20 0 chr20 47990223 47990526 -18677479 + AluSg SINE Alu 1 309 -1 209 305 84 29 chr20 47990559 47990778 -18677227 + MIR SINE MIR 16 246 -16 420 265 7 41 chr20 47990906 47991053 -18676952 - L2 LINE L2 0 3313 3172 3882 135 27 21 chr20 47991072 47991696 -18676309 - MER41B LTR ERV1 -7 628 1 699 194 35 86 chr20 47991696 47991928 -18676077 - L2 LINE L2 -162 3151 2932 212 270 16 0 chr20 47992477 47992540 -18675465 - MIR SINE MIR -71 137 74 184 222 123 62 chr20 47992958 47993039 -18674966 + MIR SINE MIR 59 144 -118 271 218 18 0 chr20 47993193 47993248 -18674757 + MIR SINE MIR 201 256 -6 277 316 181 33 chr20 47993294 47993509 -18674496 + MIR SINE MIR 10 256 -6 246 327 128 26 chr20 47993544 47993700 -18674305 + MIR SINE MIR 87 258 -4 259 360 29 22 chr20 47993861 47993997 -18674008 - MIR SINE MIR -69 139 3 736 30 20 0 chr20 47994311 47994410 -18673595 + (TAGA)n Simple_repeat Simple_repeat 2 102 0 423 0 0 0 chr20 47994410 47994457 -18673548 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 327 191 0 0 chr20 47994458 47994526 -18673479 + GA-rich Low_complexity Low_complexity 1 68 0 537 246 95 86 chr20 47994527 47994759 -18673246 - MIR SINE MIR -21 241 8 316 227 40 0 chr20 47995713 47995788 -18672217 - MER96 DNA MER1_type? 0 175 98 340 296 15 67 chr20 47995899 47995993 -18672012 + MIR3 SINE MIR 67 153 -55 946 155 111 53 chr20 47995993 47996200 -18671805 - MER20 DNA MER1_type 0 219 1 340 296 15 67 chr20 47996200 47996240 -18671765 + MIR3 SINE MIR 153 194 -14 350 269 134 42 chr20 47996318 47996556 -18671449 - MIR SINE MIR 0 262 3 637 271 118 31 chr20 47997677 47998068 -18669937 + HAL1b LINE L1 3 427 -921 193 336 98 42 chr20 47998308 47998451 -18669554 - MIR SINE MIR -91 171 21 1029 185 10 15 chr20 47998461 47998661 -18669344 + MER3 DNA MER1_type 6 204 -5 252 244 227 34 chr20 47999360 47999479 -18668526 + MIR3 SINE MIR 18 159 -49 813 220 87 66 chr20 47999638 47999924 -18668081 + MER102b DNA MER1_type 2 293 -48 536 249 111 73 chr20 48000160 48000502 -18667503 - L2 LINE L2 -56 3257 2903 703 174 23 4 chr20 48000952 48001224 -18666781 + GA-rich Low_complexity Low_complexity 1 277 0 1638 174 33 124 chr20 48001324 48001827 -18666178 + L1ME2 LINE L1 5669 6155 -7 537 185 0 9 chr20 48002596 48002704 -18665301 + MER53 DNA DNA 23 129 -60 755 245 6 45 chr20 48002812 48003033 -18664972 + MIR SINE MIR 55 262 0 700 212 111 16 chr20 48003371 48003560 -18664445 + MIR SINE MIR 10 216 -46 702 219 0 0 chr20 48003793 48003916 -18664089 + FLAM_A SINE Alu 2 124 -9 261 268 146 0 chr20 48003936 48004018 -18663987 + MIR SINE MIR 168 261 -1 990 288 23 20 chr20 48004153 48004549 -18663456 - L1M4 LINE L1 -2451 3695 3299 506 16 16 0 chr20 48004652 48004715 -18663290 + (CA)n Simple_repeat Simple_repeat 2 65 0 222 366 45 64 chr20 48004922 48005124 -18662881 + L2 LINE L2 3044 3241 -31 354 267 20 89 chr20 48005138 48005284 -18662721 - L2 LINE L2 0 3272 3137 266 342 65 19 chr20 48005395 48005550 -18662455 + MER103 DNA DNA 4 165 -1 8940 105 18 6 chr20 48005746 48007032 -18660973 - HSMAR2 DNA Mariner -1 1301 1 587 194 71 39 chr20 48007033 48007188 -18660817 + MIR SINE MIR 103 262 0 450 302 7 22 chr20 48007327 48007466 -18660539 - MIR SINE MIR -124 138 2 459 303 203 19 chr20 48007556 48007941 -18660064 - L2 LINE L2 -265 3007 2553 335 228 78 16 chr20 48008187 48008395 -18659610 - LTR16C LTR ERVL 0 491 242 1923 191 25 0 chr20 48008535 48008891 -18659114 - MLT1A1 LTR MaLR 0 365 1 459 245 0 0 chr20 48009596 48009690 -18658315 - MER63 DNA MER1_type 0 1061 968 348 24 0 0 chr20 48009692 48009733 -18658272 + (CA)n Simple_repeat Simple_repeat 2 42 0 251 88 0 0 chr20 48009740 48009774 -18658231 - MER63 DNA MER1_type -397 39 6 692 176 0 0 chr20 48009843 48009962 -18658043 - FLAM_A SINE Alu -6 136 18 184 268 110 49 chr20 48010022 48010104 -18657901 + L2 LINE L2 3186 3272 0 639 226 181 0 chr20 48010156 48010333 -18657672 - L2 LINE L2 -1 3312 3104 207 160 144 128 chr20 48010765 48010890 -18657115 + MIR3 SINE MIR 39 165 -43 853 291 34 8 chr20 48011636 48011901 -18656104 + L2 LINE L2 2394 2665 -649 587 215 11 96 chr20 48012281 48012458 -18655547 - L1ME1 LINE L1 -48 6118 5957 452 217 133 7 chr20 48012532 48012675 -18655330 + MIR SINE MIR 29 189 -73 1106 285 43 3 chr20 48012773 48013096 -18654909 + LTR16C LTR ERVL 1 336 -155 579 253 108 16 chr20 48013095 48013289 -18654716 + LTR16C LTR ERVL 246 457 -34 * 366 295 36 0 chr20 48013299 48013411 -18654594 - MIR SINE MIR -61 201 86 360 0 0 0 chr20 48013981 48014021 -18653984 + (TTTA)n Simple_repeat Simple_repeat 2 41 0 190 293 0 0 chr20 48014028 48014069 -18653936 - L2 LINE L2 -19 3253 3213 246 297 109 0 chr20 48014079 48014180 -18653825 - MER5B DNA MER1_type 0 178 67 369 259 224 0 chr20 48014193 48014340 -18653665 + MIR SINE MIR 36 215 -47 800 266 57 44 chr20 48014570 48014886 -18653119 - Charlie4a DNA MER1_type -7 501 182 1835 129 10 29 chr20 48014887 48015259 -18652746 + AluSx SINE Alu 2 367 0 590 204 90 12 chr20 48015259 48015426 -18652579 - Charlie4a DNA MER1_type -310 198 19 214 283 0 0 chr20 48015441 48015487 -18652518 - L2 LINE L2 -568 2746 2701 490 255 123 37 chr20 48015521 48015764 -18652241 - L2 LINE L2 -609 2705 2442 286 266 0 0 chr20 48015928 48015992 -18652013 - L2 LINE L2 -213 3059 2996 200 264 46 58 chr20 48016499 48016586 -18651419 + MIR3 SINE MIR 82 167 -41 184 204 45 23 chr20 48016587 48016631 -18651374 + MIR3 SINE MIR 112 156 -52 214 162 81 0 chr20 48016970 48017007 -18650998 - MIR SINE MIR -11 251 212 428 289 0 0 chr20 48017067 48017171 -18650834 - MIR SINE MIR -12 250 147 498 350 68 9 chr20 48017178 48017507 -18650498 + L1ME LINE L1 5370 5658 -506 559 269 269 26 chr20 48018212 48018480 -18649525 + MLT1J LTR MaLR 4 336 -175 251 339 99 8 chr20 48018691 48018812 -18649193 - MIR SINE MIR -70 192 61 1536 215 46 0 chr20 48018863 48019189 -18648816 - MER58B DNA MER1_type 0 341 1 246 330 152 43 chr20 48019349 48019579 -18648426 - MIR SINE MIR 0 262 8 346 243 5 0 chr20 48019628 48019709 -18648296 - MIR SINE MIR -55 153 69 626 302 139 0 chr20 48020064 48020279 -18647726 - MIR SINE MIR -12 250 6 422 242 68 11 chr20 48020474 48020601 -18647404 - MIR SINE MIR -67 141 62 830 191 12 0 chr20 48020602 48020764 -18647241 - FRAM SINE Alu -12 164 1 456 192 36 102 chr20 48021130 48021297 -18646708 + L2 LINE L2 3158 3313 0 350 283 38 9 chr20 48021317 48021423 -18646582 + MIR SINE MIR 105 213 -49 407 298 6 62 chr20 48021613 48021791 -18646214 + MIR3 SINE MIR 27 194 -14 263 193 0 35 chr20 48022257 48022314 -18645691 - Charlie8 DNA MER1_type -2137 280 226 184 211 0 0 chr20 48022327 48022365 -18645640 - MER5B DNA MER1_type -1 177 140 455 273 25 50 chr20 48022893 48023054 -18644951 - MER90 LTR ERV1 0 614 458 264 136 136 12 chr20 48023068 48023149 -18644856 - MER90 LTR ERV1 -273 341 251 898 154 7 0 chr20 48023304 48023453 -18644552 - AluJb SINE Alu -3 309 160 1277 193 74 40 chr20 48023480 48023636 -18644369 + MER58B DNA MER1_type 5 154 -2266 1783 139 0 43 chr20 48023636 48023939 -18644066 + AluJo SINE Alu 3 292 -20 1277 193 74 40 chr20 48023939 48024108 -18643897 + MER58B DNA MER1_type 154 341 0 2240 81 3 17 chr20 48024126 48024424 -18643581 - AluSp SINE Alu -18 295 2 472 189 104 98 chr20 48024429 48024525 -18643480 - MIR SINE MIR -65 197 98 1084 203 9 22 chr20 48024525 48024747 -18643258 - MER20 DNA MER1_type 0 219 1 472 189 104 98 chr20 48024747 48024814 -18643191 - MIR SINE MIR -164 98 33 1492 196 6 13 chr20 48024959 48025270 -18642735 - AluJo SINE Alu -3 309 1 901 251 111 64 chr20 48025280 48025852 -18642153 + L2 LINE L2 2697 3303 -10 890 308 109 29 chr20 48025934 48026648 -18641357 + L2 LINE L2 2531 3313 0 787 98 5 72 chr20 48026869 48027062 -18640943 + (TTTCC)n Simple_repeat Simple_repeat 1 180 0 308 203 25 0 chr20 48027069 48027148 -18640857 + CT-rich Low_complexity Low_complexity 3 83 0 367 273 0 11 chr20 48027811 48027899 -18640106 + MIR SINE MIR 2 88 -174 1239 243 101 52 chr20 48028057 48028649 -18639356 - L2 LINE L2 -1 3312 2701 381 221 11 21 chr20 48028841 48028936 -18639069 + MIR3 SINE MIR 92 185 -23 825 130 0 0 chr20 48029274 48029405 -18638600 - L1MA9 LINE L1 0 6312 6182 340 312 58 37 chr20 48029461 48029592 -18638413 - L1ME4a LINE L1 -55 6066 5928 2214 108 0 0 chr20 48029592 48029898 -18638107 + AluSq SINE Alu 8 313 0 340 312 58 37 chr20 48029898 48029955 -18638050 - L1ME4a LINE L1 -193 5928 5874 1858 150 0 7 chr20 48030260 48030553 -18637452 - AluJo SINE Alu -21 291 1 489 289 69 16 chr20 48030652 48030898 -18637107 - L1ME4a LINE L1 -304 5817 5559 1189 250 86 42 chr20 48031221 48031768 -18636237 - L2 LINE L2 -2 3311 2722 230 313 54 9 chr20 48031805 48031917 -18636088 + L3 LINE CR1 1371 1487 -90 347 43 0 0 chr20 48031937 48031984 -18636021 + MER50 LTR ERV1 558 604 -130 233 57 29 0 chr20 48031984 48032019 -18635986 + (GAAAA)n Simple_repeat Simple_repeat 2 37 0 221 226 52 9 chr20 48033006 48033121 -18634884 + (TA)n Simple_repeat Simple_repeat 1 120 0 369 275 81 16 chr20 48033426 48033674 -18634331 - L1ME4a LINE L1 -115 6006 5709 24 32 0 0 chr20 48033696 48033727 -18634278 + AT_rich Low_complexity Low_complexity 1 31 0 297 230 168 0 chr20 48033727 48033840 -18634165 - L1ME4a LINE L1 -2 6119 5988 655 266 60 15 chr20 48033963 48034162 -18633843 - L1ME4a LINE L1 -431 5690 5483 633 236 182 21 chr20 48034306 48034548 -18633457 + MER102b DNA MER1_type 34 314 -27 1541 178 3 23 chr20 48035031 48035042 -18632963 - AluJo SINE Alu -9 303 293 456 51 0 0 chr20 48035042 48035101 -18632904 + (TATG)n Simple_repeat Simple_repeat 2 60 0 1541 178 3 23 chr20 48035101 48035392 -18632613 - AluJo SINE Alu -19 293 7 797 301 33 0 chr20 48035583 48035855 -18632150 - MER113 DNA MER1_type? -35 486 206 235 332 126 5 chr20 48035891 48036090 -18631915 - L1MC4a LINE L1 -1645 6163 5941 333 68 0 0 chr20 48036113 48036157 -18631848 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1428 137 37 41 chr20 48036157 48036428 -18631577 - AluSx SINE Alu -32 280 11 29 0 0 0 chr20 48036440 48036469 -18631536 + AT_rich Low_complexity Low_complexity 1 29 0 766 282 94 50 chr20 48036501 48037224 -18630781 - L1MC4a LINE L1 -795 5351 4904 538 234 35 14 chr20 48037233 48037378 -18630627 - L1ME4a LINE L1 -985 5161 5014 1447 177 10 14 chr20 48037387 48037675 -18630330 - L1ME4a LINE L1 -1071 5075 4789 290 362 0 0 chr20 48037678 48037816 -18630189 - L1MC4a LINE L1 -1231 4915 4778 460 294 36 10 chr20 48037824 48038018 -18629987 - L2 LINE L2 -564 2750 2552 350 285 87 0 chr20 48038494 48038649 -18629356 + MIR3 SINE MIR 10 185 -23 261 319 0 9 chr20 48038739 48038855 -18629150 + CT-rich Low_complexity Low_complexity 2 116 0 354 230 35 0 chr20 48039363 48039450 -18628555 - MER94 DNA DNA -35 99 10 401 205 24 12 chr20 48039461 48039544 -18628461 + MIR SINE MIR 17 100 -162 338 254 14 0 chr20 48039546 48039617 -18628388 - L2 LINE L2 -1 3271 3200 329 328 68 21 chr20 48039803 48039995 -18628010 - L2 LINE L2 -381 2933 2733 * 704 200 58 0 chr20 48039990 48040145 -18627860 + MIR SINE MIR 95 258 -4 1416 186 100 10 chr20 48040235 48040525 -18627480 + MER58B DNA MER1_type 26 341 0 733 300 198 9 chr20 48040533 48041110 -18626895 - L2 LINE L2 -720 2594 1909 1301 151 188 4 chr20 48041125 48041397 -18626608 - MER33 DNA MER1_type -1 323 2 216 337 31 10 chr20 48041403 48041501 -18626504 + MIR SINE MIR 98 197 -65 504 239 34 0 chr20 48041693 48041810 -18626195 + L1ME1 LINE L1 6042 6162 -4 550 260 116 105 chr20 48041904 48042293 -18625712 - L1ME4a LINE L1 0 6121 5729 761 281 132 10 chr20 48042384 48042815 -18625190 - L1ME LINE L1 -302 5819 5343 196 337 102 0 chr20 48043029 48043127 -18624878 + MIR SINE MIR 72 179 -83 237 324 135 14 chr20 48043225 48043373 -18624632 + L3 LINE CR1 1409 1574 -3 956 210 22 0 chr20 48043930 48044111 -18623894 + MER58 DNA MER1_type 1 185 -2235 628 162 74 14 chr20 48044100 48044248 -18623757 + MER58 DNA MER1_type 2263 2419 -1 * 1456 184 6 66 chr20 48044691 48044894 -18623111 - AluJo SINE Alu 0 312 135 1720 126 17 34 chr20 48044894 48045188 -18622817 + AluJb SINE Alu 1 289 -23 1456 184 6 66 chr20 48045188 48045316 -18622689 - AluJo SINE Alu -177 135 1 3167 147 2 10 chr20 48046109 48046599 -18621406 - MER66B LTR ERV1 0 486 1 393 264 124 8 chr20 48046620 48046749 -18621256 + MIR3 SINE MIR 60 203 -5 208 111 69 0 chr20 48046809 48046881 -18621124 + (TA)n Simple_repeat Simple_repeat 2 78 0 993 237 77 59 chr20 48046955 48047066 -18620939 - Charlie8 DNA MER1_type -60 281 173 1933 120 35 0 chr20 48047066 48047350 -18620655 + AluSx SINE Alu 1 294 -18 993 237 77 59 chr20 48047350 48047664 -18620341 - Charlie8 DNA MER1_type -168 173 4 201 279 0 0 chr20 48047843 48047886 -18620119 - MIR SINE MIR -91 117 75 1663 153 42 0 chr20 48047897 48048184 -18619821 + AluJo SINE Alu 1 299 -13 186 191 0 0 chr20 48048186 48048228 -18619777 + GA-rich Low_complexity Low_complexity 1 42 0 215 88 88 0 chr20 48048334 48048368 -18619637 - L2 LINE L2 -6 3307 3271 294 95 0 0 chr20 48048386 48048428 -18619577 + (ATG)n Simple_repeat Simple_repeat 3 44 0 1146 298 42 11 chr20 48048433 48048632 -18619373 + L2 LINE L2 2946 3162 -151 2107 122 0 0 chr20 48048632 48048928 -18619077 - AluSx SINE Alu -16 296 1 1146 298 42 11 chr20 48048928 48049081 -18618924 + L2 LINE L2 3162 3309 -4 544 47 0 25 chr20 48049092 48049342 -18618663 + AluY SINE Alu 1 320 0 532 307 98 14 chr20 48049350 48049565 -18618440 - MIR SINE MIR -25 237 5 206 255 0 0 chr20 48049685 48049732 -18618273 - L2 LINE L2 -16 3256 3210 183 254 136 0 chr20 48049783 48049842 -18618163 + MIR SINE MIR 56 122 -86 181 347 0 0 chr20 48050639 48050688 -18617317 - MIR SINE MIR -20 242 194 * 321 257 14 0 chr20 48050683 48050753 -18617252 - L2 LINE L2 -3 3310 3240 221 262 203 0 chr20 48050842 48050950 -18617055 - MIR SINE MIR -76 132 16 917 233 57 0 chr20 48050950 48051160 -18616845 + MER58A DNA MER1_type 1 222 -2 307 237 21 72 chr20 48051200 48051297 -18616708 - L1ME4a LINE L1 -74 6047 5956 230 284 49 12 chr20 48051317 48051398 -18616607 + MIR SINE MIR 124 207 -55 412 176 0 0 chr20 48052092 48052160 -18615845 + AluJo/FLAM SINE Alu 49 116 -196 1079 165 0 39 chr20 48052160 48052366 -18615639 - AluJb SINE Alu -9 303 106 525 159 0 56 chr20 48052389 48052496 -18615509 + FRAM SINE Alu 76 176 0 975 201 52 0 chr20 48052499 48052693 -18615312 - MIR SINE MIR -54 208 5 420 217 11 0 chr20 48052771 48052863 -18615142 + MER96 DNA MER1_type? 1 93 -82 558 278 40 23 chr20 48052915 48053088 -18614917 - MIR SINE MIR -65 197 22 675 278 24 38 chr20 48053113 48053322 -18614683 - MIR SINE MIR -31 231 26 493 289 41 46 chr20 48053495 48053692 -18614313 + MIR SINE MIR 9 204 -58 885 256 91 4 chr20 48053754 48054120 -18613885 - LTR16A LTR ERVL -3 447 18 26 50 0 0 chr20 48054144 48054184 -18613821 + AT_rich Low_complexity Low_complexity 1 40 0 496 219 55 31 chr20 48054227 48054355 -18613650 - MIR SINE MIR -95 167 37 232 280 0 0 chr20 48054383 48054433 -18613572 - L2 LINE L2 -219 3053 3004 940 254 0 0 chr20 48054446 48054643 -18613362 + MIR SINE MIR 34 230 -32 206 303 64 46 chr20 48054635 48054744 -18613261 - L2 LINE L2 -795 2519 2409 * 636 282 145 34 chr20 48055248 48055772 -18612233 + L2 LINE L2 2726 3302 -11 2721 83 19 13 chr20 48056052 48056425 -18611580 + THE1C LTR MaLR 1 375 0 624 253 70 19 chr20 48056519 48056583 -18611422 + MIR SINE MIR 91 150 -112 2084 166 96 13 chr20 48056583 48056969 -18611036 + MER47B DNA MER2_type 1 418 0 624 253 70 19 chr20 48056969 48057062 -18610943 + MIR SINE MIR 150 256 -6 358 224 40 0 chr20 48057150 48057226 -18610779 - MIR SINE MIR -131 131 53 835 228 37 64 chr20 48057688 48057932 -18610073 - MIR SINE MIR -22 240 5 1745 157 3 26 chr20 48058035 48058341 -18609664 + AluJo SINE Alu 5 303 -9 2103 105 3 25 chr20 48058894 48059209 -18608796 - AluSx SINE Alu -4 308 1 386 316 123 0 chr20 48059869 48060024 -18607981 + MIR SINE MIR 87 260 -2 205 211 0 0 chr20 48060090 48060128 -18607877 + (TA)n Simple_repeat Simple_repeat 1 38 0 1595 123 63 0 chr20 48060130 48060382 -18607623 - AluSx SINE Alu -26 286 19 48 43 0 0 chr20 48060474 48060543 -18607462 + AT_rich Low_complexity Low_complexity 1 69 0 304 175 79 0 chr20 48060775 48060838 -18607167 + MIR SINE MIR 83 150 -58 662 266 43 16 chr20 48061472 48061656 -18606349 - MER20 DNA MER1_type -15 204 16 943 175 0 0 chr20 48061698 48061858 -18606147 + AluJo SINE Alu 1 160 -152 513 338 125 22 chr20 48061897 48062258 -18605747 + L1M4 LINE L1 3508 3905 -2241 493 237 94 45 chr20 48062437 48062682 -18605323 - L1MC/D LINE L1 -2007 5801 5545 803 202 58 17 chr20 48063227 48063400 -18604605 + MER5A DNA MER1_type 4 183 -6 414 279 6 6 chr20 48063550 48063711 -18604294 + CT-rich Low_complexity Low_complexity 2 162 0 258 178 14 27 chr20 48064517 48064590 -18603415 + GA-rich Low_complexity Low_complexity 1 72 0 761 272 115 40 chr20 48064602 48065225 -18602780 - L2 LINE L2 -1 3312 2628 443 250 105 53 chr20 48065669 48065897 -18602108 + MER113 DNA MER1_type? 115 354 -167 2057 106 3 22 chr20 48065897 48066247 -18601758 - MER4A LTR ERV1 0 664 263 618 152 0 10 chr20 48066247 48066346 -18601659 - MER4A LTR ERV1 -566 98 1 310 186 86 0 chr20 48066355 48066425 -18601580 + MER113 DNA MER1_type? 360 435 -86 249 265 0 0 chr20 48066624 48066707 -18601298 + (TG)n Simple_repeat Simple_repeat 1 83 0 525 244 51 34 chr20 48066738 48066914 -18601091 + MIR SINE MIR 72 250 -12 341 301 0 0 chr20 48066983 48067076 -18600929 + MIR SINE MIR 46 138 -70 1148 251 109 28 chr20 48068986 48069381 -18598624 + L2 LINE L2 2883 3309 -4 408 218 114 125 chr20 48069515 48069804 -18598201 - L2 LINE L2 -93 3220 2935 694 249 92 30 chr20 48070174 48070576 -18597429 - MLT1H LTR MaLR 0 595 75 329 277 75 47 chr20 48070625 48070838 -18597167 + L1MC/D LINE L1 5310 5528 -2514 366 306 8 60 chr20 48071179 48071271 -18596734 + MIR SINE MIR 21 105 -103 1598 191 3 7 chr20 48071271 48071565 -18596440 - AluJo SINE Alu -19 293 1 366 306 8 60 chr20 48071565 48071606 -18596399 + MIR SINE MIR 105 147 -61 1599 216 30 30 chr20 48071901 48071934 -18596071 - MLT2D LTR ERVL -6 408 376 468 0 0 0 chr20 48071934 48071986 -18596019 + (TG)n Simple_repeat Simple_repeat 2 53 0 1599 216 30 30 chr20 48071986 48072350 -18595655 - MLT2D LTR ERVL -37 377 11 308 246 27 36 chr20 48072370 48072480 -18595525 - LTR33 LTR ERVL -401 120 12 1505 167 7 24 chr20 48072583 48072877 -18595128 - AluJb SINE Alu -23 289 1 672 260 11 98 chr20 48072895 48073172 -18594833 + MER102b DNA MER1_type 89 341 0 798 209 108 5 chr20 48073233 48073496 -18594509 + MER33 DNA MER1_type 1 244 -80 731 165 8 0 chr20 48073522 48073643 -18594362 + MLT2D LTR ERVL 11 132 -282 821 165 0 0 chr20 48073823 48073950 -18594055 + AluJb SINE Alu 1 127 -185 722 247 27 16 chr20 48074515 48074701 -18593304 - MIR SINE MIR -42 220 33 260 338 113 18 chr20 48074786 48075008 -18592997 + Charlie8 DNA MER1_type 1 243 -2174 277 272 9 61 chr20 48075171 48075285 -18592720 + MIR SINE MIR 17 124 -84 556 281 55 24 chr20 48075607 48075860 -18592145 + MIR SINE MIR 2 262 0 2043 110 7 3 chr20 48075871 48076161 -18591844 - AluSx SINE Alu -21 291 1 376 262 24 32 chr20 48076161 48076282 -18591723 - MIR SINE MIR -111 151 32 302 211 0 0 chr20 48076415 48076472 -18591533 + MIR SINE MIR 94 150 -112 727 250 38 38 chr20 48076842 48077069 -18590936 + MIR SINE MIR 20 248 -14 575 241 62 7 chr20 48077346 48077491 -18590514 - Charlie8 DNA MER1_type -2184 233 81 189 0 0 0 chr20 48077492 48077513 -18590492 + (CA)n Simple_repeat Simple_repeat 2 22 0 751 257 38 82 chr20 48077664 48078007 -18589998 + L2 LINE L2 2930 3257 -15 257 337 0 0 chr20 48078050 48078142 -18589863 - MIR SINE MIR -14 248 157 1042 267 98 17 chr20 48078145 48078564 -18589441 - MLT1K LTR MaLR 0 588 136 783 279 21 13 chr20 48078654 48078887 -18589118 + L2 LINE L2 1189 1423 -1891 511 268 32 0 chr20 48078898 48079021 -18588984 - L2 LINE L2 -10 3303 3177 713 231 44 12 chr20 48079058 48079218 -18588787 - MIR SINE MIR -90 172 8 3086 246 84 39 chr20 48079226 48080339 -18587666 + L2 LINE L2 1419 2581 -733 428 250 144 0 chr20 48080345 48080449 -18587556 + L2 LINE L2 3195 3313 0 227 274 128 68 chr20 48080452 48080569 -18587436 - MIR3 SINE MIR -7 201 78 303 295 63 63 chr20 48080628 48080835 -18587170 - MLT1K LTR MaLR -162 426 220 404 268 24 24 chr20 48082144 48082271 -18585734 - MIR SINE MIR -69 193 67 240 318 58 29 chr20 48082250 48082423 -18585582 + MIR SINE MIR 85 262 0 * 919 217 43 0 chr20 48082478 48082662 -18585343 + MER58A DNA MER1_type 1 192 -32 330 269 51 56 chr20 48082921 48083075 -18584930 - MER112 DNA MER1_type -51 209 55 1602 159 3 59 chr20 48083075 48083395 -18584610 - AluJo SINE Alu -10 302 1 330 269 51 56 chr20 48083395 48083437 -18584568 - MER112 DNA MER1_type -205 55 14 768 188 43 19 chr20 48083476 48083683 -18584322 - HsTC2 DNA Tc2 -3 1895 1684 1877 129 29 23 chr20 48083686 48084173 -18583832 + AluSx SINE Alu 1 489 0 501 195 210 44 chr20 48084184 48084389 -18583616 - HsTC2 DNA Tc2 -220 1678 1264 423 244 42 8 chr20 48084397 48084516 -18583489 - HsTC2 DNA Tc2 -1295 603 481 2022 103 21 3 chr20 48084733 48085024 -18582981 - AluSx SINE Alu -16 296 1 190 302 48 0 chr20 48085244 48085307 -18582698 - MIR SINE MIR -70 192 127 533 232 37 86 chr20 48085826 48086026 -18581979 + MIR3 SINE MIR 8 199 -63 217 204 0 56 chr20 48086282 48086336 -18581669 + L2 LINE L2 2708 2758 -556 354 125 0 16 chr20 48086346 48086410 -18581595 + MER53 DNA DNA 9 71 -118 2175 144 60 3 chr20 48086412 48086793 -18581212 - MER57A LTR ERV1 0 403 1 658 254 14 7 chr20 48086795 48086937 -18581068 - MIR SINE MIR -103 159 17 446 281 211 5 chr20 48087126 48087348 -18580657 - L1MC4a LINE L1 -331 5790 5644 1191 201 87 72 chr20 48087426 48087936 -18580069 + MLT1E LTR MaLR 15 591 -2 1096 270 11 7 chr20 48087940 48088210 -18579795 - LTR16C LTR ERVL -10 481 211 * 3337 237 69 7 chr20 48088203 48088957 -18579048 - MER21B LTR ERV1 -44 819 19 272 284 49 10 chr20 48088955 48089057 -18578948 - MER21B LTR ERV1 -757 106 1 * 278 279 153 18 chr20 48089057 48089168 -18578837 - LTR16C LTR ERVL -286 205 80 370 282 14 56 chr20 48089256 48089408 -18578597 + MIR SINE MIR 20 167 -79 706 283 133 18 chr20 48089472 48089804 -18578201 - L2 LINE L2 0 3313 2944 208 203 108 68 chr20 48090057 48090131 -18577874 - MIR SINE MIR -78 184 108 220 344 0 31 chr20 48090442 48090538 -18577467 + MIR SINE MIR 46 138 -124 3743 211 65 6 chr20 48090673 48091725 -18576280 - L1ME1 LINE L1 -5 6161 5020 1053 156 18 0 chr20 48091725 48091892 -18576113 - FAM SINE Alu -5 170 1 3743 211 65 6 chr20 48091892 48092192 -18575813 - L1ME1 LINE L1 -1146 5020 4739 2881 193 257 17 chr20 48092350 48093277 -18574728 - MER52C LTR ERV1 0 1278 1 202 254 14 56 chr20 48093277 48093348 -18574657 - MIR SINE MIR -109 153 86 594 288 117 0 chr20 48093581 48093803 -18574202 - MIR SINE MIR -11 251 4 349 247 105 32 chr20 48093975 48094165 -18573840 + L1ME3A LINE L1 5734 5937 -233 659 197 43 106 chr20 48094508 48094696 -18573309 - MER5B DNA MER1_type 0 178 3 319 290 0 97 chr20 48094730 48094774 -18573231 + L1ME2 LINE L1 5834 5881 -283 2303 80 0 3 chr20 48094774 48095074 -18572931 + AluY SINE Alu 1 299 -12 319 290 0 97 chr20 48095074 48095153 -18572852 + L1ME2 LINE L1 5881 5945 -219 540 0 0 0 chr20 48095157 48095217 -18572788 + (TA)n Simple_repeat Simple_repeat 2 61 0 207 69 0 0 chr20 48095480 48095509 -18572496 + (CACCC)n Simple_repeat Simple_repeat 4 32 0 420 311 18 0 chr20 48095734 48095876 -18572129 + MIR3 SINE MIR 35 183 -25 612 241 10 121 chr20 48095906 48096049 -18571956 - MER5B DNA MER1_type -1 177 60 1752 155 7 16 chr20 48096049 48096352 -18571653 + AluJo SINE Alu 1 300 -12 612 241 10 121 chr20 48096352 48096407 -18571598 - MER5B DNA MER1_type -118 60 1 774 243 84 71 chr20 48096453 48096846 -18571159 + MLT1L LTR MaLR 72 571 -44 582 229 75 21 chr20 48097213 48097401 -18570604 - MLT1F LTR MaLR -4 538 341 454 219 75 48 chr20 48097671 48097817 -18570188 - MLT1F LTR MaLR -445 150 1 280 230 44 71 chr20 48097997 48098110 -18569895 + MIR SINE MIR 37 146 -62 188 234 328 0 chr20 48098232 48098296 -18569709 + L2 LINE L2 3188 3272 0 430 303 13 59 chr20 48099330 48099482 -18568523 + MIR SINE MIR 20 164 -98 320 284 26 17 chr20 48099483 48099599 -18568406 + MLT1K LTR MaLR 2 118 -470 643 298 94 61 chr20 48099886 48100228 -18567777 + MLT1K LTR MaLR 233 585 -3 2231 101 0 0 chr20 48100291 48100588 -18567417 + AluSx SINE Alu 1 297 -15 2066 92 48 0 chr20 48100813 48101106 -18566899 + AluSq SINE Alu 1 307 -6 234 291 93 12 chr20 48101306 48101392 -18566613 + LTR67 LTR ERVL 109 201 -356 * 1125 267 59 15 chr20 48101335 48101672 -18566333 + MLT1L LTR MaLR 197 548 -67 2975 128 117 146 chr20 48101678 48102320 -18565685 - L1MC3 LINE L1 -1 7784 7096 253 299 13 0 chr20 48102320 48102397 -18565608 - MLT1F1 LTR MaLR -453 114 37 2975 128 117 146 chr20 48102397 48102590 -18565415 - L1MC3 LINE L1 -689 7096 6899 389 292 0 0 chr20 48103393 48103489 -18564516 + MIR SINE MIR 6 101 -161 732 303 105 36 chr20 48103525 48103888 -18564117 - L2 LINE L2 -5 3308 2921 584 221 0 23 chr20 48103902 48104033 -18563972 - MLT1C LTR MaLR 0 467 340 2050 128 39 6 chr20 48104064 48104399 -18563606 + LTR46 LTR ERV1 115 460 0 234 375 10 21 chr20 48104782 48104878 -18563127 + MIR SINE MIR 12 106 -156 404 192 14 0 chr20 48104879 48104952 -18563053 - MER81 DNA DNA 0 114 41 228 340 0 0 chr20 48105009 48105103 -18562902 + MIR SINE MIR 119 212 -50 442 287 62 31 chr20 48105200 48105329 -18562676 + L2 LINE L2 3140 3272 0 241 200 17 17 chr20 48105432 48105492 -18562513 - LTR67 LTR ERVL -11 546 487 445 273 53 0 chr20 48105715 48105847 -18562158 - MER91C DNA MER1_type -1 139 1 276 111 0 0 chr20 48106230 48106275 -18561730 + (TCCCC)n Simple_repeat Simple_repeat 3 47 0 1437 230 107 18 chr20 48106470 48106852 -18561153 - MLT1G1 LTR MaLR -175 420 5 218 337 51 25 chr20 48106900 48107096 -18560909 + L2 LINE L2 2889 3089 -183 1147 181 75 97 chr20 48107280 48107753 -18560252 - MER66A LTR ERV1 0 478 97 2233 123 3 0 chr20 48108338 48108640 -18559365 - AluSx SINE Alu -9 303 1 36 23 0 0 chr20 48108692 48108735 -18559270 + AT_rich Low_complexity Low_complexity 1 43 0 1034 101 7 0 chr20 48108754 48108893 -18559112 - AluJb SINE Alu -171 141 2 259 223 19 10 chr20 48108920 48109023 -18558982 + L1M4 LINE L1 3118 3221 -2925 260 100 0 0 chr20 48109028 48109068 -18558937 - Charlie3 DNA MER1_type -2634 76 37 318 283 75 35 chr20 48109578 48109751 -18558254 - LTR16C LTR ERVL -57 434 255 1118 137 6 0 chr20 48109842 48110017 -18557988 + MER1B DNA MER1_type 49 224 -73 454 141 13 0 chr20 48110012 48110090 -18557915 + MER1B DNA MER1_type 261 339 0 * 22 0 0 0 chr20 48110373 48110395 -18557610 + AT_rich Low_complexity Low_complexity 1 22 0 21 89 0 0 chr20 48110725 48110781 -18557224 + AT_rich Low_complexity Low_complexity 1 56 0 1954 125 47 4 chr20 48110865 48111144 -18556861 + AluSx SINE Alu 1 291 -21 350 295 80 37 chr20 48111160 48111536 -18556469 - L1ME LINE L1 -413 5708 5317 552 234 142 97 chr20 48112126 48112657 -18555348 - MLT1H1 LTR MaLR -4 548 2 2074 166 12 0 chr20 48112784 48113128 -18554877 + MER7A DNA MER2_type 1 346 0 348 351 16 27 chr20 48115823 48116008 -18551997 + L2 LINE L2 1812 1994 -1320 885 126 0 22 chr20 48116076 48116211 -18551794 - FLAM_C SINE Alu 0 133 2 180 321 0 0 chr20 48116372 48116425 -18551580 - L2 LINE L2 -976 2338 2286 885 104 0 0 chr20 48116545 48116660 -18551345 - AluY SINE Alu -11 300 186 1762 60 0 5 chr20 48116660 48116878 -18551127 - AluY SINE Alu -94 217 1 216 369 103 39 chr20 48116878 48117268 -18550737 + L2 LINE L2 2453 2867 -447 * 412 303 7 35 chr20 48117260 48117405 -18550600 - L2 LINE L2 -5 3308 3168 1483 278 75 22 chr20 48118043 48118733 -18549272 - MER20B DNA MER1_type -56 727 1 694 263 116 7 chr20 48119743 48120028 -18547977 - L1MC4a LINE L1 -40 7768 7453 327 167 53 30 chr20 48120040 48120172 -18547833 + CT-rich Low_complexity Low_complexity 3 137 0 1822 135 28 35 chr20 48120203 48120492 -18547513 - AluJo SINE Alu -25 287 1 854 228 109 45 chr20 48120492 48120688 -18547317 - L1MC4a LINE L1 -1663 6145 5920 1545 183 45 21 chr20 48120688 48120978 -18547027 - AluJo SINE Alu -15 297 1 854 228 109 45 chr20 48120978 48121092 -18546913 - L1MC4a LINE L1 -1888 5920 5815 299 326 0 0 chr20 48121125 48121214 -18546791 + L2 LINE L2 2257 2345 -969 497 299 127 0 chr20 48121499 48121696 -18546309 - MER58A DNA MER1_type -1 223 2 386 235 0 12 chr20 48123541 48123626 -18544379 + MER96 DNA MER1_type? 1 84 -91 186 270 0 0 chr20 48127492 48127566 -18540439 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 247 236 103 61 chr20 48127739 48127904 -18540101 + L1MDa LINE L1 1589 1760 -4780 1970 157 119 9 chr20 48127916 48128120 -18539885 - MLT1C LTR MaLR 0 467 287 2871 7 0 0 chr20 48128120 48128429 -18539576 - AluYa5 SINE Alu -2 309 1 1970 157 119 9 chr20 48128429 48128645 -18539360 - MLT1C LTR MaLR -180 287 1 2129 211 92 10 chr20 48128655 48129147 -18538858 - MLT1F LTR MaLR -8 534 3 727 296 209 8 chr20 48129163 48129565 -18538440 - L2 LINE L2 -1465 1849 1367 334 191 154 9 chr20 48130047 48130157 -18537848 + LTR33 LTR ERVL 5 130 -391 1592 249 155 12 chr20 48130221 48130800 -18537205 - MLT2F LTR ERVL 0 663 2 413 198 69 0 chr20 48130834 48130935 -18537070 + LTR33 LTR ERVL 401 508 -13 801 301 76 36 chr20 48131169 48131673 -18536332 + ERVL LTR ERVL 1664 2224 -3469 465 238 71 24 chr20 48131920 48132088 -18535917 - MLT1C LTR MaLR -289 178 3 1234 114 11 0 chr20 48133382 48133558 -18534447 - AluSx SINE Alu -18 292 115 380 208 79 10 chr20 48133604 48133705 -18534300 + LTR33 LTR ERVL 401 508 -13 947 87 0 0 chr20 48133705 48133820 -18534185 - AluSx SINE Alu -197 115 1 1777 127 0 23 chr20 48134216 48134476 -18533529 - AluSg SINE Alu -12 298 45 1863 128 66 7 chr20 48137642 48137931 -18530074 - AluSx SINE Alu -2 310 5 2572 243 58 37 chr20 48138213 48138874 -18529131 + L1ME LINE L1 1282 1928 -4287 219 36 0 0 chr20 48138874 48138902 -18529103 + (TA)n Simple_repeat Simple_repeat 1 28 0 2572 243 58 37 chr20 48138902 48139221 -18528784 + L1ME LINE L1 1928 2239 -3976 740 219 36 36 chr20 48139221 48139440 -18528565 - MER20 DNA MER1_type 0 219 1 2572 243 58 37 chr20 48139440 48139747 -18528258 + L1ME LINE L1 2239 2559 -3656 451 303 132 35 chr20 48139827 48140631 -18527374 + L1ME LINE L1 4811 5698 -535 1225 119 0 0 chr20 48140896 48141056 -18526949 - AluSg/x SINE Alu -18 292 133 586 326 164 21 chr20 48143385 48144109 -18523896 + L1ME LINE L1 4552 5379 -767 303 342 71 33 chr20 48144123 48144363 -18523642 + L1ME LINE L1 5408 5656 -465 998 169 77 27 chr20 48145064 48145494 -18522511 - MLT1D LTR MaLR -7 498 1 479 157 0 0 chr20 48147022 48147105 -18520900 + MLT1D LTR MaLR 1 83 -422 4829 123 50 20 chr20 48147127 48147996 -18520009 - MER4D LTR ERV1 -8 895 1 986 190 21 3 chr20 48147996 48148304 -18519701 + MLT1D LTR MaLR 112 505 0 2842 123 48 45 chr20 48148598 48149207 -18518798 + MER4B LTR ERV1 1 779 0 375 332 14 47 chr20 48149473 48149684 -18518321 - MIR SINE MIR -38 224 21 1664 216 7 0 chr20 48149685 48149995 -18518010 + AluJo SINE Alu 1 312 0 192 279 147 0 chr20 48150550 48150618 -18517387 + MIR SINE MIR 76 153 -55 5131 177 61 13 chr20 48150739 48152111 -18515894 - L1MD2 LINE L1 -18 6341 4890 203 208 56 14 chr20 48152343 48152415 -18515590 + (TCTCTG)n Simple_repeat Simple_repeat 2 76 0 182 360 53 20 chr20 48152545 48152695 -18515310 - MIR SINE MIR -13 249 95 2260 99 0 23 chr20 48152926 48153229 -18514776 - AluSg SINE Alu -14 296 1 381 209 93 62 chr20 48153563 48153692 -18514313 + L2 LINE L2 3179 3311 -2 368 306 97 70 chr20 48153755 48154323 -18513682 + L1ME3A LINE L1 2905 3487 -2659 1040 285 143 26 chr20 48154323 48155069 -18512936 + L2 LINE L2 2431 3264 -49 589 264 6 18 chr20 48155063 48155230 -18512775 - L2 LINE L2 -413 2901 2737 * 2207 255 66 20 chr20 48155239 48156631 -18511374 + L1ME3A LINE L1 4489 5951 -219 393 302 34 9 chr20 48157075 48157207 -18510798 + MIR3 SINE MIR 20 154 -54 2536 150 22 27 chr20 48157430 48157650 -18510355 + LTR57 LTR ERVL 1 220 -191 2384 70 0 13 chr20 48157650 48157951 -18510054 + AluY SINE Alu 1 297 -14 2536 150 22 27 chr20 48157951 48158143 -18509862 + LTR57 LTR ERVL 220 411 0 2365 179 66 49 chr20 48158470 48158737 -18509268 + MER66A LTR ERV1 1 281 -197 2042 108 7 36 chr20 48158737 48159042 -18508963 + AluSx SINE Alu 1 296 -16 2365 179 66 49 chr20 48159042 48159244 -18508761 + MER66A LTR ERV1 281 478 0 254 307 93 46 chr20 48160161 48160538 -18507467 - L1ME LINE L1 -298 5823 5417 2049 142 0 0 chr20 48160538 48160851 -18507154 + AluSx SINE Alu 1 313 0 254 307 93 46 chr20 48160851 48160923 -18507082 - L1ME LINE L1 -704 5417 5350 2015 85 19 7 chr20 48161356 48161626 -18506379 - AluY SINE Alu -18 293 21 1527 131 0 98 chr20 48161626 48161900 -18506105 - AluJb SINE Alu -59 253 7 2147 115 0 26 chr20 48164044 48164357 -18503648 - AluSx SINE Alu -7 305 1 2789 132 50 2 chr20 48165132 48165571 -18502434 - LTR46 LTR ERV1 0 460 1 2385 72 0 0 chr20 48165907 48166200 -18501805 - AluY SINE Alu -18 293 1 1795 213 58 95 chr20 48166669 48167355 -18500650 + L1MC4 LINE L1 7382 8042 0 507 307 73 18 chr20 48168532 48168750 -18499255 + MIR SINE MIR 21 250 -12 307 320 140 13 chr20 48168787 48168937 -18499068 - MIR SINE MIR -71 191 23 1019 170 21 16 chr20 48169137 48169325 -18498680 - MER5A DNA MER1_type 0 189 1 408 327 39 7 chr20 48170027 48170180 -18497825 + MIR SINE MIR 96 253 -9 281 200 0 0 chr20 48170186 48170236 -18497769 - Alu SINE Alu -10 298 249 229 286 0 0 chr20 48171886 48171942 -18496063 + L1ME3A LINE L1 5595 5650 -520 287 272 168 8 chr20 48171948 48172073 -18495932 + MER20B DNA MER1_type 1 145 -638 560 288 36 43 chr20 48172135 48172437 -18495568 + L1ME3A LINE L1 5647 5946 -224 226 325 7 26 chr20 48172999 48173150 -18494855 + L1M4 LINE L1 2149 2296 -3850 439 244 8 38 chr20 48173271 48173402 -18494603 + MLT1J LTR MaLR 1 127 -384 185 250 0 0 chr20 48173645 48173677 -18494328 - L2 LINE L2 -27 3286 3255 225 191 0 0 chr20 48173677 48173724 -18494281 + (TA)n Simple_repeat Simple_repeat 1 47 0 919 185 64 0 chr20 48173735 48173908 -18494097 - MIR SINE MIR -71 191 8 276 287 196 14 chr20 48174160 48174303 -18493702 + MIR3 SINE MIR 25 193 -15 340 309 81 15 chr20 48175171 48175307 -18492698 + MIR3 SINE MIR 2 146 -62 322 287 82 0 chr20 48175416 48175538 -18492467 - MIR SINE MIR -14 248 117 2381 80 3 0 chr20 48175569 48175858 -18492147 + AluSx SINE Alu 1 290 -22 351 0 0 0 chr20 48176708 48176747 -18491258 + (TG)n Simple_repeat Simple_repeat 2 40 0 233 311 41 8 chr20 48176770 48176892 -18491113 + L1M4 LINE L1 3697 3822 -2324 1310 181 82 122 chr20 48176926 48177184 -18490821 + L1MC5 LINE L1 6971 7238 -723 1540 178 51 7 chr20 48177184 48177459 -18490546 + AluJb SINE Alu 1 287 -25 1310 181 82 122 chr20 48177459 48177566 -18490439 + L1MC5 LINE L1 7238 7348 -613 2109 108 7 4 chr20 48177566 48177845 -18490160 + AluSx SINE Alu 1 280 -32 1310 181 82 122 chr20 48177845 48178036 -18489969 + L1MC5 LINE L1 7348 7506 -455 392 226 118 0 chr20 48178044 48178146 -18489859 + MLT1F1 LTR MaLR 12 125 -442 1615 158 4 0 chr20 48178146 48178399 -18489606 + L1MD3 LINE L1 7404 7657 -338 25 0 0 0 chr20 48178426 48178451 -18489554 + AT_rich Low_complexity Low_complexity 1 25 0 326 217 0 0 chr20 48178464 48178524 -18489481 - MER92C LTR ERV1 -11 543 484 610 247 7 14 chr20 48178566 48178712 -18489293 - MER92B LTR ERV1 -483 153 9 460 61 30 0 chr20 48178737 48178854 -18489151 + AluSc SINE Alu 240 358 0 418 347 15 0 chr20 48179060 48179259 -18488746 + L1ME LINE L1 5336 5537 -625 474 192 0 0 chr20 48179646 48179724 -18488281 + L1MD1 LINE L1 20 97 -6443 * 1047 173 50 58 chr20 48179721 48179999 -18488006 - L1MDa LINE L1 -4942 1598 1323 2115 219 52 50 chr20 48180008 48180706 -18487299 + L1MD1 LINE L1 96 869 -5671 1051 258 120 21 chr20 48180734 48181200 -18486805 + L1MD1 LINE L1 3677 4188 -2352 6685 177 25 3 chr20 48181201 48182337 -18485668 + MER52A LTR ERV1 594 1755 0 2036 240 51 53 chr20 48182346 48183206 -18484799 + L1MD1 LINE L1 4200 4992 -1548 3408 166 82 70 chr20 48183756 48185076 -18482929 + L1MD1 LINE L1 4991 6306 -330 971 252 60 19 chr20 48185086 48185352 -18482653 - MER41E LTR ERV1 -10 502 226 1011 86 12 12 chr20 48185524 48185686 -18482319 + (TTTC)n Simple_repeat Simple_repeat 2 163 0 2068 110 4 4 chr20 48185688 48185969 -18482036 - AluSx SINE Alu -31 281 1 1925 130 43 12 chr20 48186033 48186357 -18481648 + L1MD1 LINE L1 6303 6636 0 1046 182 28 23 chr20 48186535 48186758 -18481247 - L1P5 LINE L1 -329 5822 5591 415 286 51 5 chr20 48187615 48187811 -18480194 + LTR40c LTR ERVL 173 377 -88 3263 89 14 5 chr20 48188024 48188453 -18479552 - L1PA11 LINE L1 0 6174 5742 719 203 19 115 chr20 48189233 48189395 -18478610 + MER106A DNA MER1_type 1 130 -106 2577 69 0 0 chr20 48189395 48189700 -18478305 - AluY SINE Alu -6 305 1 719 203 19 115 chr20 48189700 48189798 -18478207 + MER106A DNA MER1_type 130 236 0 569 200 35 35 chr20 48190001 48190258 -18477747 - L1ME1 LINE L1 -125 6041 5657 1036 204 0 0 chr20 48190259 48190440 -18477565 - AluJb SINE Alu -3 309 129 420 211 0 0 chr20 48190445 48190521 -18477484 - L1ME1 LINE L1 -507 5659 5584 3115 158 12 6 chr20 48190806 48191319 -18476686 - MER34 LTR ERV1 0 542 27 2251 122 0 0 chr20 48191348 48191651 -18476354 + AluSx SINE Alu 1 303 -9 3863 294 40 24 chr20 48191804 48193336 -18474669 + HERVL LTR ERVL 1688 3314 -2239 2394 142 56 141 chr20 48193336 48193737 -18474268 - MLT2B3 LTR ERVL 0 554 220 189 0 0 0 chr20 48193737 48193758 -18474247 + (TTTTG)n Simple_repeat Simple_repeat 3 23 0 2394 142 56 141 chr20 48193758 48193961 -18474044 - MLT2B3 LTR ERVL -334 220 1 3863 294 40 24 chr20 48193961 48194307 -18473698 + HERVL LTR ERVL 3314 3653 -1900 306 216 59 20 chr20 48194382 48194484 -18473521 + HERVL LTR ERVL 5211 5316 -448 322 332 46 23 chr20 48194612 48194829 -18473176 - L1MDa LINE L1 -3915 2625 2404 301 281 91 77 chr20 48195154 48195507 -18472498 - HAL1 LINE L1 -928 1579 1222 618 197 0 0 chr20 48195739 48195866 -18472139 + (TG)n Simple_repeat Simple_repeat 2 128 0 13227 120 12 2 chr20 48196862 48198789 -18469216 - Tigger1 DNA MER2_type 0 2418 473 6909 115 26 9 chr20 48198796 48199975 -18468030 - L1MA3 LINE L1 -1 6304 5102 2826 128 62 8 chr20 48199975 48200445 -18467560 - Tigger1 DNA MER2_type -1923 495 1 539 290 43 35 chr20 48200601 48200832 -18467173 - L1MC4 LINE L1 -4 8038 7806 1697 268 28 5 chr20 48200836 48201261 -18466744 - LTR16A LTR ERVL 0 450 16 321 334 75 25 chr20 48201483 48202172 -18465833 + L1M4 LINE L1 2311 3034 -3112 373 187 264 11 chr20 48202313 48202404 -18465601 - MER5A DNA MER1_type -10 179 66 401 185 0 0 chr20 48202405 48202470 -18465535 - AluJo SINE Alu -22 290 226 891 186 19 0 chr20 48202474 48202635 -18465370 - AluJo SINE Alu -148 164 1 259 196 0 0 chr20 48202635 48202686 -18465319 - MER5A DNA MER1_type -113 76 26 294 29 0 0 chr20 48202689 48202724 -18465281 + (CA)n Simple_repeat Simple_repeat 2 36 0 366 286 71 63 chr20 48203068 48203337 -18464668 + HERVL LTR ERVL 5075 5345 -309 232 257 29 73 chr20 48204026 48204162 -18463843 + LTR16A1 LTR ERVL 328 457 0 713 272 164 57 chr20 48204312 48204410 -18463595 - LTR67 LTR ERVL 0 557 471 1889 135 57 4 chr20 48204410 48204691 -18463314 - AluSx SINE Alu -16 296 1 713 272 164 57 chr20 48204691 48205030 -18462975 - LTR67 LTR ERVL -86 471 73 332 258 40 53 chr20 48205168 48205206 -18462799 + L1MC4a LINE L1 4903 4940 -1206 1628 149 21 37 chr20 48205206 48205257 -18462748 - MER33 DNA MER1_type -2262 323 273 1737 171 7 17 chr20 48205257 48205555 -18462450 - AluJb SINE Alu -17 295 1 1628 149 21 37 chr20 48205555 48205831 -18462174 - MER33 DNA MER1_type -2312 273 1 332 258 40 53 chr20 48205831 48205943 -18462062 + L1MC4a LINE L1 4940 5051 -1095 941 294 90 39 chr20 48206056 48206668 -18461337 + L1MC4a LINE L1 5317 5959 -1849 1756 177 0 0 chr20 48206908 48207179 -18460826 + AluJb SINE Alu 1 271 -41 485 47 28 47 chr20 48207183 48207289 -18460716 + (TAAA)n Simple_repeat Simple_repeat 3 106 0 527 313 102 44 chr20 48207329 48208240 -18459765 - L1MDa LINE L1 -3534 3006 2019 505 296 56 0 chr20 48208285 48208439 -18459566 + MER20 DNA MER1_type 53 214 -5 633 296 65 62 chr20 48208465 48208547 -18459458 - HAL1 LINE L1 -840 1667 1587 2377 137 68 22 chr20 48208547 48208739 -18459266 - MER57B LTR ERV1 0 434 252 2442 46 0 3 chr20 48208739 48209044 -18458961 + AluY SINE Alu 1 304 -7 2377 137 68 22 chr20 48209044 48209266 -18458739 - MER57B LTR ERV1 -182 252 1 633 296 65 62 chr20 48209266 48210025 -18457980 - HAL1 LINE L1 -920 1587 823 312 27 0 0 chr20 48210459 48210496 -18457509 + (CA)n Simple_repeat Simple_repeat 2 38 0 357 252 176 8 chr20 48210876 48211007 -18456998 - MIR SINE MIR -3 259 107 183 300 100 12 chr20 48211006 48211086 -18456919 + MIR SINE MIR 114 200 -62 * 203 189 0 0 chr20 48211197 48211234 -18456771 + (TTA)n Simple_repeat Simple_repeat 2 38 0 237 279 47 12 chr20 48211433 48211519 -18456486 - MIR SINE MIR -56 206 118 250 59 0 0 chr20 48211612 48211646 -18456359 + MIR SINE MIR 110 143 -65 964 206 153 3 chr20 48212005 48212292 -18455713 + LTR50 LTR ERVL 1 330 -465 1016 197 79 0 chr20 48212309 48212537 -18455468 + LTR50 LTR ERVL 550 795 0 186 209 23 0 chr20 48212715 48212758 -18455247 + L2 LINE L2 2586 2629 -685 2089 160 6 9 chr20 48212800 48213144 -18454861 + MLT1A1 LTR MaLR 22 365 0 499 268 10 77 chr20 48213552 48213746 -18454259 + L2 LINE L2 2626 2806 -508 575 0 29 0 chr20 48213776 48213846 -18454159 + (TTCTC)n Simple_repeat Simple_repeat 5 76 0 553 287 40 108 chr20 48213893 48214245 -18453760 + L2 LINE L2 2945 3272 0 518 279 69 44 chr20 48215380 48215584 -18452421 + MIR SINE MIR 8 216 -46 2058 116 0 3 chr20 48215700 48216002 -18452003 + AluJb SINE Alu 1 301 -11 396 0 0 0 chr20 48216082 48216126 -18451879 + (CA)n Simple_repeat Simple_repeat 2 45 0 640 321 45 9 chr20 48216547 48216771 -18451234 + MIR SINE MIR 20 251 -11 398 297 67 12 chr20 48216868 48217033 -18450972 + MIR SINE MIR 89 262 0 2035 121 0 26 chr20 48217093 48217400 -18450605 + AluSx SINE Alu 1 299 -13 1110 264 81 23 chr20 48217584 48218073 -18449932 - L2 LINE L2 -22 3291 2772 2043 134 0 0 chr20 48218107 48218405 -18449600 + AluSx SINE Alu 2 299 -13 191 231 0 0 chr20 48218439 48218478 -18449527 - L2 LINE L2 0 3313 3275 731 211 54 22 chr20 48218492 48218677 -18449328 - MIR SINE MIR -4 258 68 265 316 37 59 chr20 48218907 48219043 -18448962 + LTR67 LTR ERVL 115 247 -310 364 302 8 16 chr20 48219082 48219208 -18448797 + LTR67 LTR ERVL 428 552 -5 450 220 33 11 chr20 48219290 48219381 -18448624 + MER96 DNA MER1_type? 1 93 -82 354 288 27 34 chr20 48219600 48219746 -18448259 + MIR SINE MIR 78 222 -40 255 247 45 67 chr20 48219765 48219854 -18448151 + MIR SINE MIR 98 184 -78 500 327 69 5 chr20 48219864 48220066 -18447939 + MIR SINE MIR 13 227 -35 797 295 107 35 chr20 48221274 48221413 -18446592 + L2 LINE L2 2556 2684 -629 2211 66 13 20 chr20 48221413 48221716 -18446289 - AluSx SINE Alu -11 301 1 797 295 107 35 chr20 48221716 48222281 -18445724 + L2 LINE L2 2684 3313 0 292 301 82 53 chr20 48222348 48222406 -18445599 - MIR SINE MIR 0 262 207 1270 154 91 17 chr20 48222406 48222704 -18445301 - MER33 DNA MER1_type -4 320 1 292 301 82 53 chr20 48222704 48222851 -18445154 - MIR SINE MIR -55 207 51 2160 107 0 0 chr20 48223220 48223520 -18444485 - AluSq SINE Alu -13 300 1 209 385 44 33 chr20 48223531 48223713 -18444292 - L2 LINE L2 -9 3304 3121 283 308 37 19 chr20 48223797 48223904 -18444101 + MER102b DNA MER1_type 230 338 -3 261 224 0 0 chr20 48223943 48223992 -18444013 - L2 LINE L2 -15 3298 3250 334 298 64 0 chr20 48224237 48224331 -18443674 - MIR SINE MIR -42 220 121 308 213 75 0 chr20 48224407 48224487 -18443518 - MIR3 SINE MIR -14 194 109 308 304 130 7 chr20 48224497 48224635 -18443370 + MIR3 SINE MIR 2 156 -52 191 235 12 74 chr20 48225141 48225222 -18442783 - MER5B DNA MER1_type -102 76 1 210 327 0 0 chr20 48225254 48225309 -18442696 - MER5A DNA MER1_type -7 182 128 311 267 112 78 chr20 48225370 48225628 -18442377 - L2 LINE L2 -112 3160 2894 183 180 20 60 chr20 48226180 48226230 -18441775 - L2 LINE L2 -96 3217 3170 1686 130 91 3 chr20 48227156 48227441 -18440564 - AluJo SINE Alu -2 310 1 288 295 106 68 chr20 48227792 48227999 -18440006 - L2 LINE L2 -199 3073 2859 960 211 30 10 chr20 48228193 48228392 -18439613 + MIR SINE MIR 39 241 -21 218 327 0 0 chr20 48228578 48228633 -18439372 + MIR SINE MIR 93 147 -115 2178 118 0 10 chr20 48228709 48229022 -18438983 + AluSq SINE Alu 1 310 -3 186 118 0 0 chr20 48229620 48229654 -18438351 + (TATG)n Simple_repeat Simple_repeat 1 34 0 1809 139 0 4 chr20 48229654 48229934 -18438071 - AluSx SINE Alu -33 279 1 327 264 82 31 chr20 48230106 48230265 -18437740 - MARNA DNA Mariner -201 385 219 283 289 0 12 chr20 48230420 48230503 -18437502 - MIR3 SINE MIR -7 201 120 899 167 36 131 chr20 48230659 48230965 -18437040 + L1ME3 LINE L1 5880 6156 -6 440 227 62 87 chr20 48231340 48231556 -18436449 + MIR SINE MIR 56 261 -1 676 266 125 83 chr20 48234254 48235048 -18432957 - L2 LINE L2 -1 3271 2444 505 366 56 15 chr20 48235049 48235459 -18432546 - L2 LINE L2 -1217 2097 1671 833 294 17 8 chr20 48235870 48236108 -18431897 - MIR SINE MIR -21 241 2 775 229 37 94 chr20 48236965 48237140 -18430865 - L3 LINE CR1 -14 1563 1380 2140 104 0 0 chr20 48237140 48237449 -18430556 - AluSg SINE Alu 0 309 1 1518 183 17 7 chr20 48237451 48237751 -18430254 - AluJo SINE Alu -8 304 2 775 229 37 94 chr20 48237751 48237816 -18430189 - L3 LINE CR1 -198 1379 1333 192 276 0 86 chr20 48238366 48238424 -18429581 - L2 LINE L2 -14 3299 3247 240 35 0 0 chr20 48238700 48238729 -18429276 + (CA)n Simple_repeat Simple_repeat 1 29 0 259 257 110 9 chr20 48239115 48239224 -18428781 + MIR SINE MIR 117 236 -26 368 284 164 11 chr20 48239299 48239494 -18428511 - MIR SINE MIR -10 252 37 189 0 0 0 chr20 48239668 48239689 -18428316 + (T)n Simple_repeat Simple_repeat 1 21 0 340 305 145 0 chr20 48240542 48240673 -18427332 + L3 LINE CR1 1417 1566 -11 206 360 27 0 chr20 48241370 48241445 -18426560 + L2 LINE L2 2715 2791 -523 180 293 221 29 chr20 48241516 48241656 -18426349 + L2 LINE L2 3144 3310 -3 417 236 74 13 chr20 48241702 48241858 -18426147 + MIR SINE MIR 27 192 -63 1528 168 47 30 chr20 48242348 48242645 -18425360 - AluJo SINE Alu -10 302 1 380 251 187 12 chr20 48243057 48243308 -18424697 - L1ME4a LINE L1 -2 6119 5825 540 259 137 9 chr20 48243494 48243706 -18424299 - L1ME4a LINE L1 -293 5828 5590 1092 199 42 5 chr20 48244117 48244333 -18423672 - MER58A DNA MER1_type 0 224 1 313 274 26 53 chr20 48244472 48244585 -18423420 + MIR SINE MIR 74 183 -79 492 294 102 21 chr20 48244627 48244814 -18423191 + MIR3 SINE MIR 4 205 -3 225 188 31 16 chr20 48247090 48247154 -18420851 + (TTA)n Simple_repeat Simple_repeat 1 65 0 196 189 135 0 chr20 48247680 48247754 -18420251 - L2 LINE L2 -380 2892 2809 2229 92 0 3 chr20 48248028 48248321 -18419684 + AluSq SINE Alu 1 292 -21 393 235 294 0 chr20 48248437 48248573 -18419432 + MIR SINE MIR 66 241 -21 484 250 115 6 chr20 48249672 48249828 -18418177 + MER3 DNA MER1_type 37 209 0 248 270 16 0 chr20 48249772 48249835 -18418170 - MER3 DNA MER1_type -105 104 41 * 1113 202 53 8 chr20 48249892 48250154 -18417851 - MER33 DNA MER1_type 0 324 51 953 207 62 0 chr20 48250308 48250501 -18417504 + MER3 DNA MER1_type 5 209 0 274 207 27 36 chr20 48250880 48250991 -18417014 + GA-rich Low_complexity Low_complexity 2 111 0 269 250 73 40 chr20 48252428 48252552 -18415453 - L2 LINE L2 -12 3260 3133 1679 143 19 57 chr20 48253080 48253394 -18414611 + AluJo SINE Alu 1 302 -10 350 259 211 18 chr20 48254436 48254602 -18413403 - L1ME4a LINE L1 -54 6067 5870 1923 114 0 0 chr20 48254665 48254937 -18413068 - AluSq SINE Alu -5 308 37 276 308 126 31 chr20 48254960 48255119 -18412886 - MIR SINE MIR -67 195 22 266 191 124 11 chr20 48256012 48256101 -18411904 + MIR SINE MIR 39 137 -71 761 258 98 22 chr20 48256216 48256441 -18411564 + MIR SINE MIR 13 254 -8 1790 230 106 64 chr20 48256998 48257316 -18410689 - L1MC5 LINE L1 -49 7912 7609 396 0 0 0 chr20 48257316 48257360 -18410645 + (CA)n Simple_repeat Simple_repeat 2 45 0 1790 230 106 64 chr20 48257360 48257946 -18410059 - L1MC5 LINE L1 -352 7609 6970 189 74 0 0 chr20 48261440 48261467 -18406538 + (CA)n Simple_repeat Simple_repeat 1 27 0 228 107 0 89 chr20 48262790 48262846 -18405159 + (CCCCG)n Simple_repeat Simple_repeat 4 54 0 209 316 151 7 chr20 48263349 48263501 -18404504 - L2 LINE L2 -313 3000 2827 1428 306 141 19 chr20 48263543 48264256 -18403749 - L2 LINE L2 -591 2723 1884 2068 95 44 0 chr20 48264256 48264551 -18403454 + AluSp SINE Alu 1 308 -5 1428 306 141 19 chr20 48264551 48264700 -18403305 - L2 LINE L2 -1430 1884 1755 515 263 68 0 chr20 48264750 48264883 -18403122 - MIR SINE MIR -119 143 2 186 171 57 0 chr20 48265162 48265197 -18402808 + L3 LINE CR1 1528 1564 -13 1092 201 5 27 chr20 48265553 48265777 -18402228 + MER20 DNA MER1_type 1 219 0 1246 251 62 51 chr20 48265804 48266334 -18401671 - L2 LINE L2 -596 2718 2183 1555 283 126 14 chr20 48266342 48266473 -18401532 - MER20B DNA MER1_type -7 776 661 2311 79 3 16 chr20 48266473 48266789 -18401216 + AluSp SINE Alu 1 312 -1 1555 283 126 14 chr20 48266789 48267317 -18400688 - MER20B DNA MER1_type -122 661 43 475 312 110 42 chr20 48267920 48268407 -18399598 - L2 LINE L2 -93 3179 2652 191 303 183 28 chr20 48269983 48270306 -18397699 - L2 LINE L2 -56 3216 2844 882 235 28 36 chr20 48272627 48272878 -18395127 - MIR SINE MIR 0 262 14 275 368 8 23 chr20 48273579 48273712 -18394293 - L3b LINE CR1 -349 1234 1104 343 346 0 9 chr20 48274106 48274213 -18393792 - MIR3 SINE MIR -49 159 54 268 338 110 0 chr20 48275394 48275530 -18392475 - MIR SINE MIR -28 234 84 226 317 108 0 chr20 48275582 48275702 -18392303 + MER117 DNA MER1_type 18 150 -47 536 233 82 19 chr20 48277616 48277775 -18390230 + MIR SINE MIR 43 211 -51 727 206 127 0 chr20 48278366 48278555 -18389450 - MER58A DNA MER1_type -3 221 9 258 310 46 0 chr20 48278559 48278646 -18389359 - MIR3 SINE MIR -30 178 88 189 300 57 14 chr20 48279778 48279848 -18388157 - L2 LINE L2 0 3272 3200 251 319 82 22 chr20 48279943 48280078 -18387927 - MIR SINE MIR -36 226 84 * 532 283 62 50 chr20 48280054 48280294 -18387711 + MIR SINE MIR 8 250 -12 1343 100 0 11 chr20 48280416 48280606 -18387399 - AluSq SINE Alu -12 301 114 353 208 13 0 chr20 48280606 48280683 -18387322 - LTR16A LTR ERVL -180 270 193 813 89 81 16 chr20 48280699 48280823 -18387182 - AluSq SINE Alu -181 132 1 285 313 36 18 chr20 48281233 48281345 -18386660 - L2 LINE L2 0 3313 3200 387 0 0 0 chr20 48281355 48281398 -18386607 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 939 174 0 0 chr20 48281399 48281548 -18386457 - FRAM SINE Alu -17 149 1 1542 241 65 2 chr20 48281571 48281985 -18386020 - LTR16A LTR ERVL -10 440 1 941 136 20 7 chr20 48282192 48282485 -18385520 + (TGGA)n Simple_repeat Simple_repeat 2 298 0 358 314 43 59 chr20 48282504 48282759 -18385246 - L2 LINE L2 -181 3091 2841 371 235 37 31 chr20 48282957 48283117 -18384888 - MIR SINE MIR -56 206 49 364 314 118 0 chr20 48284202 48284355 -18383650 + MIR SINE MIR 92 262 0 249 300 60 20 chr20 48284362 48284462 -18383543 - MIR SINE MIR -79 183 80 189 259 176 30 chr20 48284618 48284749 -18383256 + MIR SINE MIR 16 165 -97 208 308 31 0 chr20 48284811 48284876 -18383129 + MIR SINE MIR 109 175 -87 297 314 92 20 chr20 48285960 48286113 -18381892 + L2 LINE L2 3042 3205 -67 2013 101 24 7 chr20 48286381 48286668 -18381337 + AluSx SINE Alu 1 292 -20 330 302 12 0 chr20 48286668 48286754 -18381251 + L2 LINE L2 3227 3313 0 2363 63 3 0 chr20 48286841 48287141 -18380864 - AluY SINE Alu -10 301 1 289 272 152 48 chr20 48287394 48287684 -18380321 - MLT1J LTR MaLR -191 320 1 965 269 122 18 chr20 48287790 48288344 -18379661 + L2 LINE L2 2494 3097 -216 2192 157 40 2 chr20 48288367 48288819 -18379186 - Charlie4a DNA MER1_type -23 485 17 494 255 103 11 chr20 48288847 48289031 -18378974 + L2 LINE L2 3113 3313 0 533 321 16 66 chr20 48289612 48289724 -18378281 + MIR SINE MIR 20 115 -147 1766 163 7 3 chr20 48289724 48290019 -18377986 - AluJb SINE Alu -16 296 1 533 321 16 66 chr20 48290019 48290149 -18377856 + MIR SINE MIR 115 250 -12 566 285 60 68 chr20 48290289 48290538 -18377467 + MIR SINE MIR 2 248 -14 2451 98 17 9 chr20 48290716 48291064 -18376941 - L1PA13 LINE L1 -6 6157 5807 2396 92 0 0 chr20 48291081 48291385 -18376620 - AluSx SINE Alu -8 304 1 258 343 0 0 chr20 48291561 48291634 -18376371 - L2 LINE L2 -53 3219 3147 303 271 113 33 chr20 48291926 48292077 -18375928 - MER103 DNA DNA -2 164 2 190 271 43 14 chr20 48292159 48292229 -18375776 - MIR SINE MIR -133 129 58 865 233 0 12 chr20 48292352 48292524 -18375481 - MER91A DNA MER1_type -25 171 2 198 219 141 0 chr20 48293200 48293264 -18374741 - MIR3 SINE MIR -25 183 111 209 371 0 0 chr20 48293314 48293376 -18374629 + MIR SINE MIR 85 146 -62 597 233 38 109 chr20 48293388 48293598 -18374407 - MIR SINE MIR -6 256 62 1721 146 6 63 chr20 48295093 48295408 -18372597 + AluJb SINE Alu 16 312 0 217 274 0 16 chr20 48295972 48296034 -18371971 + C-rich Low_complexity Low_complexity 2 62 0 475 255 25 56 chr20 48296115 48296276 -18371729 + MIR SINE MIR 65 220 -42 293 226 170 9 chr20 48297673 48297779 -18370226 - MIR3 SINE MIR 0 208 86 182 309 154 9 chr20 48299152 48299262 -18368743 + MIR SINE MIR 32 157 -105 509 296 21 38 chr20 48299279 48299465 -18368540 - MIR SINE MIR 0 262 80 203 297 16 16 chr20 48299531 48299595 -18368410 - MIR SINE MIR -81 181 118 353 288 147 29 chr20 48300016 48300186 -18367819 - MIR SINE MIR -52 210 21 664 340 61 4 chr20 48300262 48300509 -18367496 + MIR SINE MIR 2 262 0 325 274 329 0 chr20 48300577 48300723 -18367282 - MIR3 SINE MIR -3 205 12 1403 212 43 38 chr20 48301213 48301586 -18366419 + LTR16C LTR ERVL 111 485 -6 500 313 86 20 chr20 48301658 48301856 -18366149 - MIR SINE MIR -8 254 44 324 292 62 31 chr20 48301952 48302082 -18365923 - L2 LINE L2 -15 3257 3124 243 229 156 0 chr20 48302445 48302554 -18365451 + L1M4 LINE L1 5209 5334 -812 304 304 184 18 chr20 48302901 48303069 -18364936 + MIR3 SINE MIR 11 206 -2 265 359 47 9 chr20 48303202 48303308 -18364697 - MIR SINE MIR -64 144 35 355 200 67 0 chr20 48303785 48303860 -18364145 + MIR SINE MIR 43 122 -86 180 282 71 12 chr20 48303964 48304049 -18363956 + MIR SINE MIR 129 218 -44 556 227 44 169 chr20 48305225 48305526 -18362479 - MIR SINE MIR 0 262 1 196 283 105 58 chr20 48305594 48305785 -18362220 - L2 LINE L2 -210 3062 2863 349 359 0 0 chr20 48306692 48306798 -18361207 - L1ME1 LINE L1 -1 6165 6060 375 306 50 56 chr20 48307595 48307775 -18360230 - MIR SINE MIR -80 182 4 185 352 176 0 chr20 48308400 48308491 -18359514 - MIR SINE MIR 0 262 156 1976 120 0 23 chr20 48308692 48308992 -18359013 - AluSx SINE Alu -19 293 1 275 190 0 52 chr20 48309040 48309098 -18358907 - MIR SINE MIR -101 161 107 602 299 145 0 chr20 48309302 48309516 -18358489 - MIR SINE MIR -12 250 6 430 242 68 11 chr20 48309711 48309838 -18358167 - MIR SINE MIR -67 141 62 908 191 12 0 chr20 48309839 48310001 -18358004 - FRAM SINE Alu -12 164 1 454 192 36 102 chr20 48310367 48310534 -18357471 + L2 LINE L2 3158 3313 0 348 283 38 9 chr20 48310554 48310660 -18357345 + MIR SINE MIR 105 213 -49 411 298 6 62 chr20 48310850 48311028 -18356977 + MIR3 SINE MIR 27 194 -14 246 193 0 35 chr20 48311494 48311551 -18356454 - MER102b DNA MER1_type -50 291 237 188 211 0 0 chr20 48311564 48311602 -18356403 - MER5B DNA MER1_type -1 177 140 439 267 25 50 chr20 48312130 48312291 -18355714 - MER90 LTR ERV1 0 614 458 246 94 75 0 chr20 48312333 48312386 -18355619 - MER90 LTR ERV1 -307 307 251 971 154 7 0 chr20 48312541 48312690 -18355315 - AluJb SINE Alu -3 309 160 740 187 45 0 chr20 48312717 48312872 -18355133 + MER58 DNA MER1_type 5 166 -175 1901 139 19 41 chr20 48312873 48313190 -18354815 + AluJo SINE Alu 3 312 0 388 235 10 0 chr20 48313410 48313512 -18354493 + HsTC2 DNA Tc2 481 583 -1315 458 205 200 34 chr20 48313537 48313742 -18354263 + HsTC2 DNA Tc2 1264 1678 -220 251 191 0 0 chr20 48313742 48313789 -18354216 + CT-rich Low_complexity Low_complexity 1 47 0 2027 129 29 23 chr20 48313789 48314248 -18353757 - AluSx SINE Alu 0 461 1 721 184 48 19 chr20 48314251 48314457 -18353548 + HsTC2 DNA Tc2 1679 1890 -8 281 269 56 61 chr20 48314496 48314538 -18353467 + MER112 DNA MER1_type 14 55 -205 1646 168 3 62 chr20 48314538 48314859 -18353146 + AluJo SINE Alu 1 302 -10 281 269 56 61 chr20 48314859 48315013 -18352992 + MER112 DNA MER1_type 55 209 -51 857 217 43 0 chr20 48315272 48315456 -18352549 - MER58A DNA MER1_type -32 192 1 220 294 56 35 chr20 48315511 48315654 -18352351 - MIR SINE MIR 0 262 117 387 262 32 24 chr20 48315663 48315789 -18352216 + MIR SINE MIR 67 193 -69 277 217 0 43 chr20 48317099 48317168 -18350837 + MLT1K LTR MaLR 220 285 -303 226 274 128 68 chr20 48317365 48317482 -18350523 + MIR3 SINE MIR 78 201 -7 423 250 144 0 chr20 48317485 48317589 -18350416 - L2 LINE L2 0 3313 3195 3090 246 84 39 chr20 48317595 48318707 -18349298 - L2 LINE L2 -733 2581 1419 718 231 44 12 chr20 48318715 48318875 -18349130 + MIR SINE MIR 8 172 -90 509 268 32 0 chr20 48318912 48319035 -18348970 + L2 LINE L2 3177 3303 -10 793 279 21 13 chr20 48319046 48319279 -18348726 - L2 LINE L2 -1891 1423 1189 922 274 98 17 chr20 48319369 48319788 -18348217 + MLT1K LTR MaLR 136 588 0 256 337 0 0 chr20 48319791 48319883 -18348122 + MIR SINE MIR 157 248 -14 788 254 38 82 chr20 48319926 48320269 -18347736 - L2 LINE L2 -15 3257 2930 351 0 0 0 chr20 48320418 48320457 -18347548 + (TG)n Simple_repeat Simple_repeat 2 40 0 540 241 62 7 chr20 48320458 48320603 -18347402 + Charlie8 DNA MER1_type 81 233 -2184 730 250 38 38 chr20 48320880 48321107 -18346898 - MIR SINE MIR -14 248 20 287 228 0 0 chr20 48321476 48321533 -18346472 - MIR SINE MIR -112 150 94 379 262 24 32 chr20 48321666 48321787 -18346218 + MIR SINE MIR 32 152 -106 2188 110 7 3 chr20 48321787 48322077 -18345928 + AluSx SINE Alu 1 291 -21 608 277 55 24 chr20 48322088 48322341 -18345664 - MIR SINE MIR 0 262 2 286 272 9 61 chr20 48322663 48322777 -18345228 - MIR SINE MIR -84 124 17 1579 280 71 22 chr20 48323243 48323936 -18344069 + MER20B DNA MER1_type 1 727 -56 418 303 7 35 chr20 48324574 48324719 -18343286 + L2 LINE L2 3168 3308 -5 251 369 103 39 chr20 48324711 48325101 -18342904 - L2 LINE L2 -447 2867 2453 * 975 81 0 0 chr20 48325101 48325224 -18342781 + AluY SINE Alu 1 123 -188 2101 72 21 98 chr20 48325262 48325597 -18342408 + AluY SINE Alu 1 309 -2 220 305 84 29 chr20 48325630 48325849 -18342156 + MIR SINE MIR 16 246 -16 424 265 7 41 chr20 48325977 48326124 -18341881 - L2 LINE L2 0 3313 3172 3686 144 27 19 chr20 48326143 48326766 -18341239 - MER41B LTR ERV1 -7 628 1 690 191 39 87 chr20 48326766 48326997 -18341008 - L2 LINE L2 -162 3151 2932 216 270 16 0 chr20 48327546 48327609 -18340396 - MIR SINE MIR -71 137 74 188 222 123 62 chr20 48328027 48328108 -18339897 + MIR SINE MIR 59 144 -118 271 218 18 0 chr20 48328262 48328317 -18339688 + MIR SINE MIR 201 256 -6 268 281 94 39 chr20 48328363 48328491 -18339514 + MIR SINE MIR 10 144 -118 1812 136 11 17 chr20 48328921 48329208 -18338797 - AluSp SINE Alu -27 286 2 467 189 104 98 chr20 48329213 48329309 -18338696 - MIR SINE MIR -65 197 98 1109 203 9 22 chr20 48329309 48329531 -18338474 - MER20 DNA MER1_type 0 219 1 467 189 104 98 chr20 48329531 48329598 -18338407 - MIR SINE MIR -164 98 33 1541 212 6 13 chr20 48329743 48330054 -18337951 - AluJo SINE Alu -3 309 1 544 217 81 99 chr20 48330064 48330389 -18337616 + L2 LINE L2 2697 3025 -288 737 235 34 0 chr20 48331084 48331263 -18336742 + MER58 DNA MER1_type 1 185 -156 592 162 74 14 chr20 48331252 48331400 -18336605 + MER58 DNA MER1_type 2263 2419 -1 * 550 300 97 10 chr20 48331816 48332106 -18335899 + L1MC4a LINE L1 7480 7794 -14 23 0 0 0 chr20 48333158 48333181 -18334824 + GC_rich Low_complexity Low_complexity 1 23 0 220 276 15 52 chr20 48333192 48333326 -18334679 + C-rich Low_complexity Low_complexity 2 130 0 1987 166 0 6 chr20 48333449 48333763 -18334242 - AluJo SINE Alu 0 312 1 271 331 73 16 chr20 48333861 48334106 -18333899 - L1ME LINE L1 -304 5817 5559 180 311 66 0 chr20 48434538 48434599 -18233406 - L2 LINE L2 -1 3312 3248 1152 262 119 4 chr20 48434603 48435221 -18232784 + L2 LINE L2 2601 3312 -1 385 256 25 33 chr20 48435312 48435433 -18232572 + MLT1K LTR MaLR 138 257 -331 238 289 33 11 chr20 48435560 48435650 -18232355 + MLT1K LTR MaLR 497 588 0 418 319 60 12 chr20 48435668 48435834 -18232171 - MIR SINE MIR -9 253 80 2091 61 4 14 chr20 48435913 48436190 -18231815 + AluY SINE Alu 1 274 -37 209 57 29 0 chr20 48436195 48436230 -18231775 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 261 222 0 0 chr20 48436452 48436506 -18231499 - L2 LINE L2 -1 3312 3259 180 338 39 13 chr20 48436598 48436675 -18231330 - MIR SINE MIR -176 86 8 222 197 15 182 chr20 48436734 48436937 -18231068 - L2 LINE L2 -189 3083 2915 367 252 72 9 chr20 48437394 48437505 -18230500 - L2 LINE L2 -4 3309 3192 565 258 122 15 chr20 48437906 48438130 -18229875 + MIR SINE MIR 12 256 -6 1754 121 106 15 chr20 48438206 48438342 -18229663 + AluSx SINE Alu 1 123 -189 2045 114 17 0 chr20 48438342 48438632 -18229373 + AluY SINE Alu 1 295 -16 1754 121 106 15 chr20 48438632 48438768 -18229237 + AluSx SINE Alu 123 298 -14 259 313 46 46 chr20 48438770 48438901 -18229104 + MLT1K LTR MaLR 73 203 -385 2010 93 3 80 chr20 48439726 48439891 -18228114 - AluSx SINE Alu -13 299 170 2143 86 3 7 chr20 48439891 48440183 -18227822 - AluY SINE Alu -20 291 1 2010 93 3 80 chr20 48440183 48440341 -18227664 - AluSx SINE Alu -142 170 1 813 268 173 18 chr20 48440468 48440856 -18227149 - L2 LINE L2 -11 3302 2855 278 274 18 89 chr20 48440857 48440897 -18227108 - L2 LINE L2 -567 2747 2706 1993 156 0 0 chr20 48440897 48441204 -18226801 - AluJo SINE Alu -5 307 1 278 274 18 89 chr20 48441204 48441331 -18226674 - L2 LINE L2 -608 2706 2592 829 247 191 50 chr20 48441394 48441876 -18226129 - MLT1G1 LTR MaLR 0 595 46 1028 188 79 5 chr20 48443058 48443260 -18224745 - MER20 DNA MER1_type -2 217 1 507 300 185 25 chr20 48443986 48444349 -18223656 - L2 LINE L2 -16 3297 2877 876 251 147 43 chr20 48445927 48446356 -18221649 + MLT1H LTR MaLR 20 533 -16 192 97 0 0 chr20 48446480 48446511 -18221494 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 364 237 0 0 chr20 48446592 48446668 -18221337 + MIR SINE MIR 115 190 -72 398 155 42 0 chr20 48446802 48446873 -18221132 - Charlie8 DNA MER1_type -9 2408 2335 384 276 142 22 chr20 48447023 48447157 -18220848 - Charlie8 DNA MER1_type -2246 171 22 616 256 35 25 chr20 48447810 48448013 -18219992 - L2 LINE L2 -1 3312 3108 942 261 98 22 chr20 48448080 48448448 -18219557 + MLT1L LTR MaLR 176 571 -44 1645 161 45 18 chr20 48448710 48448996 -18219009 + AluJb SINE Alu 1 294 -18 496 271 87 39 chr20 48449713 48449942 -18218063 + L2 LINE L2 2167 2406 -908 894 196 39 6 chr20 48450006 48450185 -18217820 - MER20 DNA MER1_type -31 188 4 846 252 78 42 chr20 48450188 48450446 -18217559 + L2 LINE L2 2473 2720 -593 2214 116 0 0 chr20 48450446 48450748 -18217257 - AluSx SINE Alu -8 304 3 846 252 78 42 chr20 48450748 48450859 -18217146 + L2 LINE L2 2720 2826 -487 2102 133 0 0 chr20 48450859 48451160 -18216845 - AluSx SINE Alu -11 301 1 846 252 78 42 chr20 48451160 48451388 -18216617 + L2 LINE L2 2826 3094 -219 2086 118 0 10 chr20 48451393 48451697 -18216308 - AluSx SINE Alu -11 301 1 260 299 44 29 chr20 48452237 48452359 -18215646 + MLT1L LTR MaLR 114 261 -327 664 283 98 0 chr20 48452466 48452671 -18215334 - MIR SINE MIR -2 260 36 409 270 25 95 chr20 48452738 48452938 -18215067 + MLT1K LTR MaLR 398 583 -5 683 234 98 37 chr20 48453792 48454036 -18213969 + MIR SINE MIR 3 261 -1 273 352 40 0 chr20 48455414 48455539 -18212466 + L2 LINE L2 3142 3271 -1 327 208 8 25 chr20 48456224 48456504 -18211501 + (CCG)n Simple_repeat Simple_repeat 3 322 0 33 85 0 0 chr20 48456559 48456641 -18211364 + GC_rich Low_complexity Low_complexity 1 82 0 24 85 0 0 chr20 48456693 48456752 -18211253 + GC_rich Low_complexity Low_complexity 1 59 0 449 251 115 16 chr20 48457682 48457865 -18210140 - MIR SINE MIR -50 212 12 1063 127 51 69 chr20 48458271 48458331 -18209674 - MER33 DNA MER1_type -2292 293 233 1832 135 7 7 chr20 48458331 48458619 -18209386 + AluJb SINE Alu 1 288 -24 1063 127 51 69 chr20 48458619 48458834 -18209171 - MER33 DNA MER1_type -2352 233 23 230 319 43 43 chr20 48458874 48458968 -18209037 - MIR3 SINE MIR -44 164 71 216 265 0 0 chr20 48459485 48459534 -18208471 + (TG)n Simple_repeat Simple_repeat 2 50 0 389 273 96 53 chr20 48461529 48461716 -18206289 + MIR SINE MIR 55 249 -13 602 270 135 8 chr20 48461928 48462180 -18205825 - L1MC4 LINE L1 0 8042 7759 866 289 81 47 chr20 48462187 48462634 -18205371 + L2 LINE L2 2852 3313 0 391 230 103 118 chr20 48462724 48462928 -18205077 + MIR SINE MIR 57 257 -5 1952 156 7 3 chr20 48463341 48463636 -18204369 - AluJo SINE Alu -15 297 2 1867 111 4 34 chr20 48463746 48464008 -18203997 + AluSx SINE Alu 1 254 -58 1148 215 139 54 chr20 48464163 48464336 -18203669 + MLT1C LTR MaLR 6 163 -304 2205 129 10 0 chr20 48464336 48464639 -18203366 + AluSx SINE Alu 1 306 -6 1148 215 139 54 chr20 48464639 48464889 -18203116 + MLT1C LTR MaLR 163 465 -2 23 0 0 0 chr20 48464905 48464928 -18203077 + GC_rich Low_complexity Low_complexity 1 23 0 204 288 30 0 chr20 48465011 48465077 -18202928 - MER5B DNA MER1_type -61 117 50 627 184 35 0 chr20 48465078 48465219 -18202786 - L1MB7 LINE L1 0 6184 6039 227 250 17 0 chr20 48465232 48465292 -18202713 + MER5B DNA MER1_type 113 173 -5 2349 93 10 0 chr20 48465799 48466100 -18201905 - AluSx SINE Alu -8 304 1 2407 79 20 3 chr20 48467188 48467493 -18200512 - AluSg SINE Alu 0 310 1 861 151 0 0 chr20 48467846 48467992 -18200013 + MER5A DNA MER1_type 1 146 -43 1872 149 6 19 chr20 48468472 48468794 -18199211 + L1M3 LINE L1 5444 5761 -422 22 35 0 0 chr20 48468879 48468908 -18199097 + AT_rich Low_complexity Low_complexity 1 29 0 1894 137 16 44 chr20 48468915 48469236 -18198769 + AluJb SINE Alu 1 312 0 552 321 87 11 chr20 48469323 48469610 -18198395 + L2 LINE L2 2258 2566 -748 1343 275 83 11 chr20 48469940 48470395 -18197610 - LTR16C LTR ERVL 0 491 4 608 232 176 24 chr20 48470478 48470728 -18197277 - MER113 DNA MER1_type? -140 381 94 474 245 3 0 chr20 48471882 48472280 -18195725 + (TG)n Simple_repeat Simple_repeat 1 399 0 192 161 0 0 chr20 48472499 48472530 -18195475 - MIR SINE MIR -37 225 195 192 269 19 0 chr20 48472539 48472591 -18195414 - L2 LINE L2 -5 3267 3215 321 240 165 8 chr20 48472841 48472962 -18195043 - MIR SINE MIR -110 152 13 222 250 0 0 chr20 48472999 48473051 -18194954 + MIR SINE MIR 94 145 -117 946 285 120 21 chr20 48473661 48474469 -18193536 - L2 LINE L2 -26 3287 2412 1744 105 0 9 chr20 48474810 48475038 -18192967 + AluSx SINE Alu 1 226 -86 3670 106 85 7 chr20 48475038 48475635 -18192370 + LTR9B LTR ERV1 1 644 0 456 157 0 0 chr20 48475635 48475718 -18192287 + AluSx SINE Alu 221 303 -7 1707 101 109 16 chr20 48475729 48476031 -18191974 + AluSx SINE Alu 1 326 0 430 252 101 0 chr20 48476643 48476782 -18191223 - MLT1L LTR MaLR 0 615 463 1809 180 134 116 chr20 48476963 48477712 -18190293 - LTR1B LTR ERV1 -75 751 1 340 269 41 78 chr20 48477768 48477987 -18190018 - MLT1L LTR MaLR -388 227 17 1621 180 4 15 chr20 48478471 48478743 -18189262 + AluJo SINE Alu 1 269 -43 1945 118 7 18 chr20 48478743 48479020 -18188985 + AluSx SINE Alu 21 296 -16 231 213 21 0 chr20 48479033 48479080 -18188925 + Charlie5 DNA MER1_type 19 66 -2546 731 167 0 8 chr20 48479081 48479201 -18188804 + AluJo/FLAM SINE Alu 1 119 -183 2145 81 3 41 chr20 48479202 48479526 -18188479 - AluSp SINE Alu 0 313 1 365 130 0 26 chr20 48479556 48479633 -18188372 + Charlie5 DNA MER1_type 53 127 -2485 * 1418 192 73 14 chr20 48479630 48479999 -18188006 + Charlie5 DNA MER1_type 2234 2624 0 242 299 84 28 chr20 48481637 48481744 -18186261 + MIR SINE MIR 129 241 -21 521 319 123 19 chr20 48482652 48482962 -18185043 - L2 LINE L2 -4 3309 2968 4916 187 47 14 chr20 48482964 48484378 -18183627 + L1MB3 LINE L1 4103 5571 -612 3476 147 22 0 chr20 48484486 48485107 -18182898 + L1MB3 LINE L1 5549 6183 0 441 278 29 17 chr20 48485114 48485287 -18182718 - L2 LINE L2 -341 2973 2799 234 228 0 63 chr20 48485302 48485381 -18182624 - MIR SINE MIR -121 141 68 1149 250 17 41 chr20 48485381 48485725 -18182280 + MLT1J LTR MaLR 2 337 -174 220 336 44 15 chr20 48485993 48486130 -18181875 - L2 LINE L2 -555 2759 2619 866 243 13 47 chr20 48486505 48486740 -18181265 - MIR SINE MIR -1 261 35 197 243 178 9 chr20 48487086 48487193 -18180812 + L2 LINE L2 3184 3308 -5 396 191 119 0 chr20 48487194 48487278 -18180727 + L2 LINE L2 3207 3300 -13 228 67 0 0 chr20 48487279 48487309 -18180696 + (TGAA)n Simple_repeat Simple_repeat 2 31 0 235 293 0 17 chr20 48488221 48488279 -18179726 + MLT1J LTR MaLR 86 142 -369 207 231 11 0 chr20 48488401 48488459 -18179546 + MIR SINE MIR 116 173 -89 297 235 38 76 chr20 48488461 48488593 -18179412 - MLT1K LTR MaLR 0 588 462 530 267 126 15 chr20 48489085 48489347 -18178658 + MER113 DNA MER1_type? 110 400 -121 2088 127 0 36 chr20 48489538 48489845 -18178160 + AluSx SINE Alu 3 298 -14 1847 167 10 13 chr20 48491044 48491355 -18176650 + AluSx SINE Alu 1 310 -2 397 253 30 0 chr20 48491363 48491462 -18176543 + L1ME2 LINE L1 6034 6135 -29 502 350 54 30 chr20 48491475 48491773 -18176232 + L1M4 LINE L1 2875 3181 -2965 2102 142 7 0 chr20 48492004 48492306 -18175699 - AluSx SINE Alu -8 304 1 642 181 128 0 chr20 48492801 48492950 -18175055 + AluSg/x SINE Alu 137 304 -8 841 150 0 0 chr20 48493027 48493160 -18174845 + FLAM_C SINE Alu 1 133 0 247 143 18 18 chr20 48493161 48493217 -18174788 + GA-rich Low_complexity Low_complexity 2 57 0 305 242 16 57 chr20 48493219 48493343 -18174662 - L1ME3A LINE L1 -34 6136 6018 2459 142 35 28 chr20 48493517 48493948 -18174057 + Tigger2a DNA MER2_type 1 434 0 1808 163 3 0 chr20 48494792 48495075 -18172930 + AluJo SINE Alu 19 302 -10 1990 133 0 4 chr20 48495086 48495360 -18172645 + AluSx SINE Alu 13 286 -22 396 82 0 0 chr20 48495360 48495421 -18172584 + (CA)n Simple_repeat Simple_repeat 2 62 0 613 144 0 0 chr20 48495810 48495900 -18172105 - AluSg/x SINE Alu -18 292 203 365 274 34 8 chr20 48496455 48496572 -18171433 + MIR SINE MIR 44 163 -99 251 100 0 0 chr20 48496638 48496678 -18171327 - MIR SINE MIR -112 150 111 304 212 91 30 chr20 48497561 48497660 -18170345 - Charlie8 DNA MER1_type -2235 182 78 273 140 20 0 chr20 48497838 48497888 -18170117 - U7 snRNA snRNA -12 51 1 455 308 51 45 chr20 48497958 48498250 -18169755 + L2 LINE L2 3011 3304 -9 1800 143 79 4 chr20 48499453 48499733 -18168272 + AluSx SINE Alu 1 301 -11 471 233 107 111 chr20 48499876 48499932 -18168073 - MLT1J LTR MaLR -48 463 408 2094 135 13 3 chr20 48499932 48500236 -18167769 + AluSx SINE Alu 1 307 -5 471 233 107 111 chr20 48500236 48500420 -18167585 - MLT1J LTR MaLR -103 408 225 2513 117 42 2 chr20 48500420 48500830 -18167175 - MSTB LTR MaLR 0 426 1 471 233 107 111 chr20 48500830 48500978 -18167027 - MLT1J LTR MaLR -286 225 36 370 233 180 12 chr20 48501005 48501177 -18166828 - L1ME LINE L1 -370 5751 5551 211 329 0 0 chr20 48501596 48501675 -18166330 - L2 LINE L2 -313 3000 2922 503 258 0 0 chr20 48501676 48501773 -18166232 - MER81 DNA DNA -7 107 11 316 330 11 0 chr20 48501768 48501862 -18166143 - MER81 DNA DNA -19 95 1 * 459 286 102 9 chr20 48501944 48502294 -18165711 + MLT1J LTR MaLR 75 481 -30 227 169 62 31 chr20 48504028 48504093 -18163912 + MLT2D LTR ERVL 220 286 -128 237 226 0 65 chr20 48504137 48504199 -18163806 + MLT2D LTR ERVL 229 286 -128 229 218 36 18 chr20 48505373 48505428 -18162577 + MLT2D LTR ERVL 231 286 -128 328 308 92 17 chr20 48509223 48509463 -18158542 + L2 LINE L2 2719 2976 -338 283 289 61 51 chr20 48509459 48509656 -18158349 + L2 LINE L2 2836 3034 -238 * 275 109 22 0 chr20 48509790 48509836 -18158169 + MADE1 DNA Mariner 1 47 -33 315 137 0 0 chr20 48509866 48509917 -18158088 + MADE1 DNA Mariner 30 80 0 256 258 220 30 chr20 48509921 48510053 -18157952 + L2 LINE L2 3155 3311 -2 1363 200 0 16 chr20 48510820 48511098 -18156907 - AluJb SINE Alu 0 312 51 710 211 0 0 chr20 48511109 48511242 -18156763 - FLAM_C SINE Alu 0 133 1 542 299 10 34 chr20 48511243 48511450 -18156555 + L2 LINE L2 3111 3312 -1 2299 110 7 0 chr20 48511736 48512036 -18155969 - AluSx SINE Alu -10 302 1 527 114 6 186 chr20 48512143 48512310 -18155695 - MER96B DNA MER1_type? 0 417 281 458 163 114 66 chr20 48512197 48512363 -18155642 + MER96B DNA MER1_type? 14 187 -230 * 1767 107 121 4 chr20 48512679 48512951 -18155054 + AluSx SINE Alu 1 304 -8 436 337 119 0 chr20 48516005 48516207 -18151798 + MIR SINE MIR 8 233 -29 307 213 0 0 chr20 48516845 48516906 -18151099 - MLT1I LTR MaLR -275 134 74 2158 99 28 0 chr20 48517505 48517789 -18150216 + AluSx SINE Alu 1 292 -20 466 243 45 9 chr20 48518420 48518531 -18149474 + MIR SINE MIR 28 142 -120 214 148 229 0 chr20 48519002 48519063 -18148942 - MIR SINE MIR -12 250 176 792 227 92 0 chr20 48519375 48519582 -18148423 - MIR SINE MIR -12 250 25 629 259 70 53 chr20 48520119 48520478 -18147527 + MLT1K LTR MaLR 124 488 -100 1080 219 72 4 chr20 48520479 48520730 -18147275 - MLT1E2 LTR MaLR 0 626 359 2458 167 20 2 chr20 48520730 48521174 -18146831 - L1MA4 LINE L1 -165 6135 5684 225 0 0 0 chr20 48521175 48521200 -18146805 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 876 237 170 28 chr20 48521204 48521592 -18146413 - MLT1E1 LTR MaLR -242 400 1 285 172 65 65 chr20 48521592 48521684 -18146321 + MLT1K LTR MaLR 484 575 -13 2054 170 0 0 chr20 48521685 48521997 -18146008 + AluSx SINE Alu 1 312 0 1626 176 60 6 chr20 48522005 48522369 -18145636 + L1MB7 LINE L1 5784 6167 -17 2582 80 0 0 chr20 48522827 48523138 -18144867 + AluY SINE Alu 1 311 0 913 261 129 28 chr20 48523298 48523769 -18144236 - LTR53 LTR ERVL 0 519 1 2251 105 0 3 chr20 48523919 48524235 -18143770 + AluSx SINE Alu 1 315 0 319 336 34 0 chr20 48524714 48524860 -18143145 - L2 LINE L2 -3135 179 29 709 286 118 22 chr20 48525114 48525477 -18142528 - MLT1L LTR MaLR -176 439 42 208 234 43 0 chr20 48525846 48525893 -18142112 - MIR SINE MIR -67 141 93 377 290 62 44 chr20 48528098 48528356 -18139649 + L2 LINE L2 2798 3050 -263 506 304 118 9 chr20 48528576 48528796 -18139209 - MIR SINE MIR -5 257 14 222 118 0 0 chr20 48528815 48528849 -18139156 + (A)n Simple_repeat Simple_repeat 1 34 0 2321 86 0 0 chr20 48528955 48529264 -18138741 - AluSc SINE Alu 0 309 1 602 176 98 69 chr20 48529683 48529887 -18138118 - MER63A DNA MER1_type 0 210 1 393 105 0 0 chr20 48530076 48530133 -18137872 - 5S rRNA rRNA -21 100 44 207 333 15 0 chr20 48530190 48530256 -18137749 - L2 LINE L2 0 3313 3247 291 241 23 23 chr20 48531027 48531114 -18136891 + L2 LINE L2 3184 3270 -2 2067 136 36 0 chr20 48531962 48532263 -18135742 - AluJo SINE Alu 0 312 1 307 284 0 11 chr20 48532516 48532604 -18135401 + CT-rich Low_complexity Low_complexity 2 88 0 1632 76 0 9 chr20 48532852 48533063 -18134942 + AluSx SINE Alu 1 209 -103 2111 85 0 0 chr20 48533063 48533321 -18134684 + AluY SINE Alu 41 298 -13 1428 104 59 18 chr20 48533392 48533613 -18134392 - MER30 DNA MER1_type 0 230 1 777 292 126 7 chr20 48533764 48534192 -18133813 + L1MC4 LINE L1 6888 7366 -676 365 287 57 0 chr20 48535016 48535138 -18132867 - L2 LINE L2 -2 3311 3183 246 318 80 17 chr20 48535296 48535535 -18132470 + LTR16C LTR ERVL 181 434 -57 506 165 31 0 chr20 48536155 48536252 -18131753 + LTR49-int LTR ERV1 3348 3447 -2884 277 257 104 35 chr20 48537039 48537183 -18130822 - LTR16A1 LTR ERVL 0 457 304 668 330 63 54 chr20 48538487 48538914 -18129091 + L1MC4a LINE L1 4876 5306 -840 228 125 36 18 chr20 48538991 48539047 -18128958 + GA-rich Low_complexity Low_complexity 4 60 0 706 320 79 46 chr20 48539050 48539571 -18128434 + L1MC4a LINE L1 5383 5920 -1888 1595 202 123 35 chr20 48540127 48540693 -18127312 + MLT1E1 LTR MaLR 1 624 0 424 334 40 56 chr20 48540693 48540822 -18127183 - L2 LINE L2 -30 3283 3153 1478 204 7 42 chr20 48540822 48541130 -18126875 + AluJo SINE Alu 1 297 -15 424 334 40 56 chr20 48541130 48541374 -18126631 - L2 LINE L2 -160 3153 2916 1854 152 3 3 chr20 48541714 48541997 -18126008 - AluJb SINE Alu -29 283 1 238 270 14 0 chr20 48542004 48542078 -18125927 - MER113 DNA MER1_type? -304 217 143 1011 240 77 17 chr20 48542082 48542369 -18125636 - L1ME1 LINE L1 -5 6161 5858 1839 213 103 22 chr20 48543614 48544159 -18123846 - L1ME1 LINE L1 -292 5872 5284 956 235 153 17 chr20 48544181 48544639 -18123366 + MLT1E3 LTR MaLR 109 624 0 1326 169 42 118 chr20 48546195 48546296 -18121709 + MLT1B LTR MaLR 6 113 -277 2224 113 7 13 chr20 48546296 48546606 -18121399 + AluSx SINE Alu 1 308 -4 1326 169 42 118 chr20 48546606 48546912 -18121093 + MLT1B LTR MaLR 113 382 -8 256 211 276 45 chr20 48546928 48547084 -18120921 + Charlie8 DNA MER1_type 32 223 -2194 1324 206 49 62 chr20 48547469 48547523 -18120482 + LTR55 LTR ERV 1 54 -494 2201 108 3 0 chr20 48547523 48547985 -18120020 - AluSx SINE Alu 0 463 1 1324 206 49 62 chr20 48547985 48548433 -18119572 + LTR55 LTR ERV 54 538 -10 386 264 19 0 chr20 48548776 48548882 -18119123 - MER81 DNA DNA -3 111 4 823 114 38 30 chr20 48549088 48549220 -18118785 - FLAM_C SINE Alu 0 133 1 2692 107 23 6 chr20 48549774 48550242 -18117763 + MER1A DNA MER1_type 1 529 0 182 244 87 47 chr20 48550302 48550429 -18117576 + L2 LINE L2 2928 3059 -213 1054 276 52 20 chr20 48550937 48551397 -18116608 + L2 LINE L2 2449 2923 -391 373 255 195 39 chr20 48551540 48551924 -18116081 + LTR33 LTR ERVL 37 480 -41 296 263 0 80 chr20 48551932 48552069 -18115936 - MER104 DNA Tc2 -49 131 6 306 288 72 29 chr20 48552079 48552218 -18115787 + L2 LINE L2 3158 3302 -11 1821 101 8 0 chr20 48552235 48552482 -18115523 - AluSx SINE Alu 0 312 64 369 121 2 43 chr20 48552616 48552689 -18115316 - Alu SINE Alu -248 53 1 332 313 75 19 chr20 48552714 48552874 -18115131 + MLT1F LTR MaLR 9 177 -365 186 43 0 0 chr20 48552878 48552901 -18115104 + (TC)n Simple_repeat Simple_repeat 1 23 0 1011 208 129 29 chr20 48552901 48553180 -18114825 + MLT1F LTR MaLR 236 542 0 1733 122 4 0 chr20 48553509 48553772 -18114233 + L1PA16 LINE L1 5777 6040 -126 1062 93 0 0 chr20 48553773 48553902 -18114103 + AluSp SINE Alu 1 129 -184 629 257 15 50 chr20 48554029 48554290 -18113715 - MER112 DNA MER1_type -4 252 1 352 311 4 0 chr20 48554819 48555093 -18112912 + (CA)n Simple_repeat Simple_repeat 1 275 0 186 43 0 0 chr20 48555368 48555391 -18112614 + (TG)n Simple_repeat Simple_repeat 1 23 0 1166 184 52 0 chr20 48558198 48558410 -18109595 - MIR SINE MIR -27 235 13 222 269 90 30 chr20 48558542 48558676 -18109329 + L2 LINE L2 2924 3065 -248 * 574 267 91 17 chr20 48558652 48558828 -18109177 - L2 LINE L2 -17 3296 3108 716 245 38 5 chr20 48558862 48559046 -18108959 - MLT1D LTR MaLR 0 505 316 585 160 22 46 chr20 48559057 48559404 -18108601 + CT-rich Low_complexity Low_complexity 1 338 0 2009 123 0 11 chr20 48559439 48559715 -18108290 - AluSx SINE Alu -9 303 31 1067 217 88 0 chr20 48559737 48560009 -18107996 - MLT1D LTR MaLR -202 303 8 947 287 53 9 chr20 48560016 48560508 -18107497 - L2 LINE L2 -232 3081 2572 518 321 38 19 chr20 48560508 48560773 -18107232 + LTR16A LTR ERVL 16 285 -165 801 280 119 34 chr20 48561118 48561564 -18106441 - L2 LINE L2 -1 3312 2829 1466 187 29 38 chr20 48561593 48561908 -18106097 + AluJb SINE Alu 1 312 0 1780 111 118 4 chr20 48564449 48564728 -18103277 - AluSx SINE Alu -1 311 1 445 168 0 200 chr20 48565048 48565268 -18102737 + MER96B DNA MER1_type? 242 417 0 2196 110 7 0 chr20 48565375 48565675 -18102330 + AluSx SINE Alu 1 302 -10 589 302 8 33 chr20 48565961 48566169 -18101836 - L2 LINE L2 -1 3312 3109 1796 180 0 13 chr20 48566169 48566485 -18101520 + AluJb SINE Alu 1 312 0 589 302 8 33 chr20 48566485 48566518 -18101487 - L2 LINE L2 -204 3109 3077 269 304 29 39 chr20 48567289 48567391 -18100614 - L2 LINE L2 -58 3255 3155 302 137 0 0 chr20 48567395 48567446 -18100559 - MADE1 DNA Mariner 0 80 30 243 130 22 0 chr20 48567476 48567522 -18100483 - MADE1 DNA Mariner -33 47 1 326 305 51 41 chr20 48567656 48567853 -18100152 - L2 LINE L2 -238 3034 2836 * 411 308 92 17 chr20 48567849 48568089 -18099916 - L2 LINE L2 -338 2976 2719 232 210 0 65 chr20 48625667 48625729 -18042276 - MLT2D LTR ERVL -128 286 229 266 177 0 65 chr20 48626335 48626397 -18041608 - MLT2D LTR ERVL -128 286 229 428 283 102 9 chr20 48628243 48628593 -18039412 - MLT1J LTR MaLR -30 481 75 288 330 11 0 chr20 48628675 48628769 -18039236 + MER81 DNA DNA 1 95 -19 * 486 258 0 0 chr20 48628764 48628861 -18039144 + MER81 DNA DNA 11 107 -7 231 279 25 25 chr20 48628862 48628941 -18039064 + L2 LINE L2 2922 3000 -313 328 238 180 12 chr20 48629360 48629532 -18038473 + L1ME LINE L1 5551 5751 -370 448 198 13 10 chr20 48629559 48629682 -18038323 + MLT1J LTR MaLR 36 198 -313 2682 117 42 2 chr20 48629707 48630117 -18037888 + MSTB LTR MaLR 1 426 0 2112 135 13 3 chr20 48630301 48630605 -18037400 - AluSx SINE Alu -5 307 1 1833 138 78 3 chr20 48630804 48631086 -18036919 - AluSx SINE Alu -9 303 1 504 281 68 62 chr20 48632287 48632579 -18035426 - L2 LINE L2 -9 3304 3011 310 100 20 0 chr20 48632649 48632699 -18035306 + U7 snRNA snRNA 1 51 -12 297 211 100 0 chr20 48632890 48632980 -18035025 + Charlie8 DNA MER1_type 73 171 -2246 264 100 0 0 chr20 48633759 48633799 -18034206 + MIR SINE MIR 111 150 -112 419 243 54 8 chr20 48633848 48633977 -18034028 - MIR SINE MIR -10 198 49 580 260 23 47 chr20 48634682 48634940 -18033065 - MER112 DNA MER1_type -4 252 1 290 286 4 0 chr20 48635468 48635724 -18032281 + (CA)n Simple_repeat Simple_repeat 1 257 0 402 21 0 0 chr20 48635995 48636042 -18031963 + (TG)n Simple_repeat Simple_repeat 1 47 0 1186 198 52 0 chr20 48638862 48639074 -18028931 - MIR SINE MIR -27 235 13 279 261 90 30 chr20 48639206 48639340 -18028665 + L2 LINE L2 2924 3065 -248 * 556 267 81 52 chr20 48639316 48639526 -18028479 - L2 LINE L2 -17 3296 3081 722 235 37 5 chr20 48639526 48639713 -18028292 - MLT1D LTR MaLR 0 505 313 2051 149 0 9 chr20 48639723 48640211 -18027794 - AluSx SINE Alu 0 485 1 1128 222 74 0 chr20 48640224 48640508 -18027497 - MLT1D LTR MaLR -200 305 1 1147 256 65 18 chr20 48640508 48641000 -18027005 - L2 LINE L2 -232 3081 2572 439 318 45 23 chr20 48641000 48641264 -18026741 + LTR16A LTR ERVL 16 285 -165 853 303 115 28 chr20 48641610 48642072 -18025933 - L2 LINE L2 -1 3312 2811 2503 74 0 0 chr20 48642089 48642388 -18025617 + AluY SINE Alu 1 299 -12 1591 174 78 17 chr20 48642400 48642517 -18025488 + AluJb SINE Alu 1 109 -203 549 0 0 0 chr20 48642517 48642578 -18025427 + (CA)n Simple_repeat Simple_repeat 2 62 0 1591 174 78 17 chr20 48642578 48642754 -18025251 + AluJb SINE Alu 109 312 0 421 284 143 76 chr20 48643553 48643997 -18024008 + MLT1K LTR MaLR 2 486 -102 1097 179 22 54 chr20 48643997 48644221 -18023784 - MER20 DNA MER1_type 0 219 3 421 284 143 76 chr20 48644221 48644287 -18023718 + MLT1K LTR MaLR 486 546 -42 215 32 32 0 chr20 48644516 48644547 -18023458 - L2 LINE L2 -219 3053 3022 1212 226 88 49 chr20 48644805 48645291 -18022714 + MLT1D LTR MaLR 1 505 0 2439 158 60 5 chr20 48645826 48646263 -18021742 + LOR1b LTR ERV1 1 461 0 262 273 31 23 chr20 48646327 48646455 -18021550 - LTR67 LTR ERVL -1 556 428 1447 245 167 10 chr20 48646724 48646844 -18021161 - REP3 LTR ERV 0 562 462 2113 174 69 20 chr20 48646844 48647252 -18020753 + MSTA LTR MaLR 1 428 0 1447 245 167 10 chr20 48647252 48647617 -18020388 - REP3 LTR ERV -100 462 1 1965 138 46 35 chr20 48648305 48648676 -18019329 - THE1C LTR MaLR 0 375 1 477 269 23 12 chr20 48648789 48648960 -18019045 - MER96B DNA MER1_type? -7 410 238 2238 84 0 14 chr20 48649063 48649380 -18018625 + AluSg1 SINE Alu 8 309 0 341 254 200 22 chr20 48651119 48651304 -18016701 - MLT1K LTR MaLR -8 580 363 420 20 0 0 chr20 48651564 48651613 -18016392 + (TG)n Simple_repeat Simple_repeat 1 49 0 453 311 25 0 chr20 48652310 48652429 -18015576 + L2 LINE L2 3190 3311 -2 542 283 31 23 chr20 48652438 48652696 -18015309 + MIR SINE MIR 2 261 -1 512 266 39 8 chr20 48652701 48652829 -18015176 + L2 LINE L2 3182 3313 0 196 262 0 66 chr20 48653426 48653487 -18014518 - L2 LINE L2 -12 3301 3245 1199 287 92 18 chr20 48653562 48654019 -18013986 + LTR16C LTR ERVL 1 491 0 340 268 58 68 chr20 48654040 48654230 -18013775 - MLT1K LTR MaLR -26 562 375 1419 269 90 76 chr20 48654362 48655149 -18012856 - L1ME LINE L1 -5253 817 20 402 320 86 0 chr20 48655167 48655295 -18012710 - MLT1K LTR MaLR -327 261 123 251 251 66 102 chr20 48655985 48656152 -18011853 - MLT1J LTR MaLR -76 435 275 788 228 107 104 chr20 48656319 48656731 -18011274 + MER57A LTR ERV1 20 401 -2 822 273 45 18 chr20 48656864 48657084 -18010921 - MIR SINE MIR -32 230 5 23 33 0 0 chr20 48657166 48657196 -18010809 + AT_rich Low_complexity Low_complexity 1 30 0 909 191 62 67 chr20 48657202 48657574 -18010431 - L1MC5 LINE L1 -54 7907 7538 387 0 0 0 chr20 48657614 48657657 -18010348 + (TG)n Simple_repeat Simple_repeat 2 44 0 604 231 128 68 chr20 48658666 48658900 -18009105 + MIR SINE MIR 15 262 0 874 301 39 0 chr20 48658913 48659142 -18008863 + MIR SINE MIR 14 251 -11 476 225 92 0 chr20 48659392 48659512 -18008493 - MLT1H1 LTR MaLR 0 555 425 735 252 103 24 chr20 48659541 48659831 -18008174 - L2 LINE L2 -832 2482 2170 218 216 82 41 chr20 48659845 48659942 -18008063 - MIR SINE MIR -126 136 36 2540 62 7 0 chr20 48660141 48660445 -18007560 + AluSx SINE Alu 3 308 -4 545 323 41 14 chr20 48660569 48660789 -18007216 + MIR SINE MIR 13 238 -24 526 300 160 0 chr20 48660947 48661147 -18006858 - MIR SINE MIR 0 262 31 1553 194 54 6 chr20 48661267 48661602 -18006403 + L1ME2 LINE L1 5504 5854 -310 272 341 14 29 chr20 48662501 48662639 -18005366 + L2 LINE L2 3173 3308 -5 1914 189 101 12 chr20 48662642 48663070 -18004935 - MER31B LTR ERV1 0 466 1 731 199 16 27 chr20 48663458 48663644 -18004361 - MER20B DNA MER1_type 0 783 600 670 249 61 19 chr20 48663864 48664077 -18003928 - MER20B DNA MER1_type -465 318 97 1261 209 51 3 chr20 48664201 48664512 -18003493 + LTR37A LTR ERV1 101 426 0 244 256 37 12 chr20 48664516 48664598 -18003407 - MER20B DNA MER1_type -699 84 1 486 0 0 0 chr20 48664603 48664657 -18003348 + (CA)n Simple_repeat Simple_repeat 1 54 0 339 235 63 135 chr20 48665674 48665939 -18002066 + L2 LINE L2 2814 3048 -265 2140 113 0 7 chr20 48665939 48666231 -18001774 + AluSx SINE Alu 1 290 -22 339 235 63 135 chr20 48666231 48666327 -18001678 + L2 LINE L2 3048 3149 -164 295 288 0 0 chr20 48666329 48666402 -18001603 - Tigger5 DNA MER2_type 0 2323 2251 980 144 11 39 chr20 48666415 48666595 -18001410 - Tigger5 DNA MER2_type 0 2323 2149 413 167 0 15 chr20 48666562 48666628 -18001377 - Tigger5 DNA MER2_type -2258 65 1 * 535 206 36 55 chr20 48666628 48666793 -18001212 + L2 LINE L2 3149 3310 -3 285 272 96 22 chr20 48667216 48667352 -18000653 - L2 LINE L2 -213 3059 2914 231 114 0 0 chr20 48717671 48717706 -17950299 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 412 328 81 43 chr20 48717710 48718131 -17949874 - L2 LINE L2 -13 3300 2864 685 292 50 9 chr20 48718722 48718941 -17949064 - MIR SINE MIR -12 250 23 431 298 0 0 chr20 48718967 48719081 -17948924 + MIR SINE MIR 79 192 -70 441 198 0 0 chr20 48719353 48719459 -17948546 + (TG)n Simple_repeat Simple_repeat 2 107 0 656 311 21 17 chr20 48719464 48719699 -17948306 + MIR SINE MIR 16 251 -11 355 313 30 8 chr20 48719817 48719948 -17948057 + MIR SINE MIR 59 192 -70 204 298 70 18 chr20 48720027 48720141 -17947864 + L2 LINE L2 2884 3003 -310 855 256 5 0 chr20 48720222 48720413 -17947592 + MER58A DNA MER1_type 8 199 -25 569 173 27 0 chr20 48720785 48720895 -17947110 - LTR16C LTR ERVL -9 482 370 1872 163 33 13 chr20 48721558 48721864 -17946141 - AluJb SINE Alu 0 312 1 327 275 98 21 chr20 48722469 48722662 -17945343 - L2 LINE L2 -411 2903 2696 231 314 14 0 chr20 48722803 48722873 -17945132 + L2 LINE L2 3201 3271 -1 515 328 83 61 chr20 48723253 48723798 -17944207 + LTR67 LTR ERVL 1 557 0 825 249 132 27 chr20 48723949 48724283 -17943722 - L2 LINE L2 0 3313 2945 305 294 16 32 chr20 48724308 48724434 -17943571 - L2 LINE L2 -482 2832 2709 2473 127 43 12 chr20 48724500 48724919 -17943086 + MSTB1 LTR MaLR 1 432 0 676 211 8 0 chr20 48724919 48725052 -17942953 - MER68 LTR ERV1 -269 293 160 518 279 6 0 chr20 48725055 48725213 -17942792 - L2 LINE L2 -685 2629 2471 474 331 11 17 chr20 48725320 48725501 -17942504 - MIR3 SINE MIR -9 199 20 341 286 0 0 chr20 48725569 48725653 -17942352 + LTR50 LTR ERVL 1 84 -711 302 209 87 43 chr20 48725707 48725822 -17942183 - LTR41 LTR ERVL -6 767 648 540 260 17 52 chr20 48725979 48726106 -17941899 + L2 LINE L2 2532 2653 -661 1165 242 84 50 chr20 48726106 48726484 -17941521 - LTR16A1 LTR ERVL 0 457 61 2307 91 0 10 chr20 48726484 48726781 -17941224 + AluSq SINE Alu 1 294 -19 1165 242 84 50 chr20 48726781 48726840 -17941165 - LTR16A1 LTR ERVL -396 61 5 540 260 17 52 chr20 48726840 48726885 -17941120 + L2 LINE L2 2653 2698 -616 230 262 82 25 chr20 48726995 48727117 -17940888 + MIR SINE MIR 17 145 -63 1663 260 34 37 chr20 48727202 48727583 -17940422 + MER20B DNA MER1_type 192 572 -211 2398 117 8 8 chr20 48727583 48727958 -17940047 - THE1C LTR MaLR 0 375 1 1663 260 34 37 chr20 48727958 48728168 -17939837 + MER20B DNA MER1_type 572 781 -2 358 279 16 23 chr20 48729109 48729238 -17938767 - MER74A LTR ERVL -14 544 417 1448 170 151 11 chr20 48729678 48730055 -17937950 - MER74A LTR ERVL -127 431 2 222 204 0 20 chr20 48730056 48730105 -17937900 + (CA)n Simple_repeat Simple_repeat 1 48 0 474 294 71 50 chr20 48730741 48731163 -17936842 + L2 LINE L2 2848 3278 -35 216 363 42 42 chr20 48731216 48731384 -17936621 + MIR SINE MIR 47 214 -48 227 191 0 0 chr20 48731505 48731547 -17936458 + (TG)n Simple_repeat Simple_repeat 2 43 0 384 239 9 73 chr20 48731612 48731721 -17936284 - MIR SINE MIR -62 200 99 1949 138 69 0 chr20 48732312 48732601 -17935404 - AluJb SINE Alu -1 311 3 987 287 107 13 chr20 48732605 48733065 -17934940 + MLT1K LTR MaLR 84 586 -2 579 47 0 58 chr20 48733065 48733151 -17934854 + AluSc SINE Alu 214 294 -15 1034 216 0 5 chr20 48733509 48733717 -17934288 - MER3 DNA MER1_type 0 209 3 284 307 37 60 chr20 48733846 48734061 -17933944 - L2 LINE L2 0 3313 3104 425 302 143 13 chr20 48735387 48735702 -17932303 - MLT1K LTR MaLR -222 366 11 2701 36 0 3 chr20 48737214 48737519 -17930486 - AluY SINE Alu -7 304 1 283 264 88 16 chr20 48737538 48737663 -17930342 - L1MC5 LINE L1 -76 7885 7752 228 285 53 66 chr20 48737708 48737936 -17930069 - L1MC4a LINE L1 -172 7636 7412 2122 102 53 7 chr20 48738071 48738356 -17929649 - AluSg SINE Alu -12 298 1 204 300 164 0 chr20 48738729 48738839 -17929166 - MIR SINE MIR -30 232 105 566 296 91 38 chr20 48738868 48739504 -17928501 + L2 LINE L2 2632 3309 -4 1978 142 0 14 chr20 48739858 48740186 -17927819 - AluSx SINE Alu 0 324 1 278 259 52 67 chr20 48740987 48741180 -17926825 + L2 LINE L2 16 205 -3109 233 280 0 0 chr20 48742058 48742108 -17925897 + polypyrimidine Low_complexity Low_complexity 1 50 0 921 136 0 0 chr20 48742175 48742307 -17925698 - AluSp/q SINE Alu 0 313 182 496 220 182 13 chr20 48742582 48742741 -17925264 - MER5A DNA MER1_type 0 189 4 230 391 11 0 chr20 48742882 48742974 -17925031 - MIR SINE MIR -156 106 14 2279 88 11 0 chr20 48743127 48743412 -17924593 - AluSg SINE Alu -21 289 2 2171 113 3 23 chr20 48743417 48743718 -17924287 - AluSx SINE Alu -17 295 1 276 295 38 19 chr20 48744747 48744852 -17923153 + MIR3 SINE MIR 85 191 -17 369 262 64 12 chr20 48745303 48745452 -17922553 - MLT1K LTR MaLR -341 247 109 23 0 0 0 chr20 48745855 48745878 -17922127 + AT_rich Low_complexity Low_complexity 1 23 0 792 233 92 19 chr20 48746262 48746468 -17921537 - MIR SINE MIR -36 226 6 203 133 0 0 chr20 48746567 48746597 -17921408 + (C)n Simple_repeat Simple_repeat 1 30 0 201 348 76 0 chr20 48747431 48747523 -17920482 + L2 LINE L2 3209 3307 -6 969 226 18 9 chr20 48748153 48748374 -17919631 + MER45C DNA AcHobo 731 953 0 1338 234 88 41 chr20 48748473 48749082 -17918923 + L2 LINE L2 2384 3019 -294 606 261 72 9 chr20 48749145 48749367 -17918638 + MER106A DNA MER1_type 1 236 0 298 213 148 46 chr20 48751258 48751366 -17916639 - MIR SINE MIR -60 202 84 241 301 11 0 chr20 48752285 48752378 -17915627 - MLT1J LTR MaLR -41 470 377 296 269 134 0 chr20 48752536 48752655 -17915350 - MLT1J LTR MaLR -373 138 4 222 329 12 12 chr20 48753023 48753108 -17914897 - MIR3 SINE MIR -43 165 81 2005 149 3 7 chr20 48753321 48753629 -17914376 + AluJo SINE Alu 1 307 -5 437 271 132 23 chr20 48753644 48753887 -17914118 - HAL1 LINE L1 -192 2315 2029 2306 84 34 0 chr20 48753887 48754184 -17913821 - AluSc SINE Alu -2 307 1 437 271 132 23 chr20 48754184 48754250 -17913755 - HAL1 LINE L1 -478 2029 1972 451 242 174 11 chr20 48754260 48754325 -17913680 + MER112 DNA MER1_type 1 54 -206 345 62 0 0 chr20 48754325 48754373 -17913632 + (CA)n Simple_repeat Simple_repeat 2 49 0 451 242 174 11 chr20 48754373 48754485 -17913520 + MER112 DNA MER1_type 54 207 -53 2157 117 0 17 chr20 48754599 48754899 -17913106 - AluSx SINE Alu -7 305 11 921 225 28 0 chr20 48755231 48755444 -17912561 - MER20 DNA MER1_type 0 219 1 274 262 119 8 chr20 48757888 48758014 -17909991 - MIR3 SINE MIR -50 158 19 400 222 63 24 chr20 48758027 48758153 -17909852 - MIR SINE MIR -24 238 108 245 343 7 56 chr20 48758392 48758535 -17909470 - MIR SINE MIR -34 228 93 422 285 63 72 chr20 48758632 48758951 -17909054 + MLT1H LTR MaLR 31 346 -203 268 205 134 18 chr20 48758966 48759078 -17908927 + MLT1I LTR MaLR 285 409 0 191 315 43 11 chr20 48759777 48759869 -17908136 - MIR SINE MIR -80 182 88 338 279 18 74 chr20 48759938 48760167 -17907838 + L1ME4a LINE L1 5676 5891 -230 526 215 225 52 chr20 48760945 48761350 -17906655 - L2 LINE L2 -12 3301 2827 395 313 40 0 chr20 48761429 48761605 -17906400 + MER5A DNA MER1_type 5 187 -2 256 292 104 7 chr20 48761801 48761945 -17906060 + LTR16C LTR ERVL 158 315 -176 181 97 32 0 chr20 48762943 48762974 -17905031 + MIR SINE MIR 115 146 -62 590 279 95 0 chr20 48762981 48763139 -17904866 + MER5B DNA MER1_type 1 173 -5 422 309 0 0 chr20 48763189 48763312 -17904693 - MIR3 SINE MIR -21 187 65 353 113 0 0 chr20 48763938 48763991 -17904014 - MLT1L LTR MaLR -6 609 557 315 237 209 7 chr20 48764005 48764144 -17903861 + MER5A DNA MER1_type 12 178 -11 1173 223 58 0 chr20 48764390 48764681 -17903324 - L1MD2 LINE L1 -27 6332 6025 795 190 103 0 chr20 48764682 48764856 -17903149 - LTR47A LTR ERVL 0 452 261 1710 64 9 0 chr20 48764993 48765226 -17902779 - L1PA5 LINE L1 0 6154 5920 3256 204 42 18 chr20 48765339 48765439 -17902566 - L1MD1 LINE L1 -215 6027 5931 2415 93 0 0 chr20 48765439 48765739 -17902266 + AluSx SINE Alu 1 300 -12 3256 204 42 18 chr20 48765739 48766748 -17901257 - L1MD1 LINE L1 -311 5931 4894 711 238 87 81 chr20 48766914 48767258 -17900747 - MLT1L LTR MaLR -238 377 32 294 29 0 0 chr20 48767307 48767342 -17900663 + (TG)n Simple_repeat Simple_repeat 2 36 0 1123 176 33 9 chr20 48768087 48768297 -17899708 - MER20 DNA MER1_type -3 216 2 330 271 80 20 chr20 48768767 48768918 -17899087 - MIR SINE MIR -95 167 8 3757 110 2 25 chr20 48771095 48771622 -17896383 - MER61E LTR ERV1 -54 515 1 211 251 0 7 chr20 48772139 48772239 -17895766 + (TG)n Simple_repeat Simple_repeat 1 126 -23 2370 153 100 0 chr20 48772239 48772650 -17895355 + LTR47A LTR ERVL 1 452 0 211 251 0 7 chr20 48772650 48772674 -17895331 + (TG)n Simple_repeat Simple_repeat 126 149 0 269 218 40 64 chr20 48772918 48773018 -17894987 + MLT1K LTR MaLR 139 244 -344 6191 186 25 22 chr20 48773059 48773944 -17894061 - L1MC1 LINE L1 -6 6327 5446 826 157 0 15 chr20 48773944 48774078 -17893927 - FLAM_C SINE Alu -1 132 1 6191 186 25 22 chr20 48774078 48774840 -17893165 - L1MC1 LINE L1 -887 5446 4688 2166 88 0 44 chr20 48774840 48775158 -17892847 - AluSc SINE Alu -5 304 1 6191 186 25 22 chr20 48775158 48775994 -17892011 - L1MC1 LINE L1 -1645 4688 3841 2265 67 0 0 chr20 48776313 48776595 -17891410 + AluY SINE Alu 5 286 -25 252 0 0 0 chr20 48776749 48776777 -17891228 + (TG)n Simple_repeat Simple_repeat 1 28 0 327 312 0 0 chr20 48777628 48777705 -17890300 - MER2 DNA MER2_type -1 344 268 1035 155 48 68 chr20 48777816 48778022 -17889983 - MER2 DNA MER2_type -138 207 6 302 271 47 0 chr20 48778225 48778332 -17889673 - L1ME3 LINE L1 -43 6119 6008 2174 140 78 0 chr20 48778349 48778720 -17889285 + MSTA LTR MaLR 2 401 -27 845 158 6 0 chr20 48778727 48778885 -17889120 + CT-rich Low_complexity Low_complexity 2 160 0 1011 109 0 0 chr20 48778885 48779041 -17888964 + (TC)n Simple_repeat Simple_repeat 2 157 0 1978 102 7 4 chr20 48779042 48779317 -17888688 - AluSp SINE Alu -32 281 6 392 98 0 0 chr20 48779317 48779368 -17888637 + MSTA LTR MaLR 378 428 0 2106 264 28 36 chr20 48779381 48779638 -17888367 - L1ME3 LINE L1 -181 5981 5723 2203 90 0 3 chr20 48779638 48779938 -17888067 - AluY SINE Alu -12 299 1 2106 264 28 36 chr20 48779938 48780553 -17887452 - L1ME3 LINE L1 -439 5723 5122 2939 136 7 84 chr20 48780623 48781161 -17886844 - LOR1a LTR ERV1 0 497 1 279 346 10 20 chr20 48781196 48781297 -17886708 - MIR SINE MIR -161 101 2 810 248 67 0 chr20 48781303 48781513 -17886492 - MLT1K LTR MaLR -2 586 363 1887 236 120 27 chr20 48781529 48782117 -17885888 + MLT1G LTR MaLR 1 590 0 597 288 99 45 chr20 48782117 48782430 -17885575 - MLT1K LTR MaLR -255 333 4 507 315 94 30 chr20 48782555 48783251 -17884754 - L2 LINE L2 -220 3052 2307 867 214 29 6 chr20 48783478 48783773 -17884232 - MLT1A1 LTR MaLR -1 415 1 569 291 37 0 chr20 48784127 48784316 -17883689 - MIR SINE MIR -14 248 53 1534 134 12 0 chr20 48784590 48784836 -17883169 - AluSx SINE Alu -63 249 1 290 301 72 5 chr20 48785046 48785210 -17882795 - LTR33A LTR ERVL -306 215 44 1541 169 138 20 chr20 48786003 48786199 -17881806 - MLT1B LTR MaLR 0 390 218 2927 102 39 0 chr20 48786199 48786611 -17881394 - MSTA LTR MaLR 0 428 1 1541 169 138 20 chr20 48786611 48786763 -17881242 - MLT1B LTR MaLR -172 218 1 396 0 0 0 chr20 48787929 48787973 -17880032 + (ATGTG)n Simple_repeat Simple_repeat 1 44 0 2490 110 88 15 chr20 48788013 48788412 -17879593 - MSTA LTR MaLR 0 428 1 724 196 4 28 chr20 48788831 48789402 -17878603 + (CACCAT)n Simple_repeat Simple_repeat 1 556 0 288 281 0 0 chr20 48789367 48789534 -17878471 + (CAT)n Simple_repeat Simple_repeat 2 168 0 * 599 210 60 36 chr20 48790340 48790500 -17877505 - LTR16C LTR ERVL 0 491 328 1959 242 117 8 chr20 48790500 48791028 -17876977 + MLT1G LTR MaLR 1 586 -4 231 242 32 16 chr20 48791036 48791098 -17876907 - LTR16C LTR ERVL -164 327 265 924 302 55 22 chr20 48791179 48791540 -17876465 + L2 LINE L2 2936 3308 -5 385 292 114 32 chr20 48791602 48791821 -17876184 - L2 LINE L2 -218 3054 2818 2190 107 0 0 chr20 48792061 48792352 -17875653 - AluSx SINE Alu -21 291 1 774 284 124 30 chr20 48792886 48793288 -17874717 + MLT1K LTR MaLR 149 588 0 218 293 102 24 chr20 48794968 48795135 -17872870 + MIR SINE MIR 83 262 0 2586 160 31 0 chr20 48795201 48795614 -17872391 + MSTB LTR MaLR 1 426 0 24 32 0 0 chr20 48795696 48795727 -17872278 + AT_rich Low_complexity Low_complexity 1 31 0 330 293 9 9 chr20 48795794 48795900 -17872105 + CT-rich Low_complexity Low_complexity 2 107 0 705 307 103 21 chr20 48796489 48797331 -17870674 + L2 LINE L2 2398 3313 0 365 284 17 17 chr20 48797381 48797497 -17870508 - MIR3 SINE MIR -8 200 85 287 206 68 0 chr20 48798276 48798349 -17869656 + L2 LINE L2 3209 3286 -27 412 255 155 21 chr20 48798500 48798829 -17869176 - L2 LINE L2 -217 3096 2727 197 316 19 32 chr20 48798833 48798988 -17869017 - L2 LINE L2 -794 2520 2368 272 372 0 33 chr20 48799557 48799678 -17868327 + MIR3 SINE MIR 42 158 -50 753 313 14 0 chr20 48799794 48800008 -17867997 - MIR SINE MIR -45 217 1 261 0 0 0 chr20 48800010 48800039 -17867966 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1131 326 85 14 chr20 48801180 48801466 -17866539 + L1MDb LINE L1 1094 1358 -5088 1796 168 3 3 chr20 48801466 48801770 -17866235 + AluJb SINE Alu 1 304 -8 1131 326 85 14 chr20 48801770 48802299 -17865706 + L1MDb LINE L1 1358 2007 -4439 645 341 78 34 chr20 48802302 48802686 -17865319 + L1MDb LINE L1 2059 2459 -4128 297 257 158 10 chr20 48802764 48802865 -17865140 - MER5A DNA MER1_type -19 170 55 276 252 159 28 chr20 48802772 48802879 -17865126 + MER5B DNA MER1_type 30 150 -28 * 282 116 0 0 chr20 48803803 48803846 -17864159 + (A)n Simple_repeat Simple_repeat 1 43 0 391 185 179 53 chr20 48803890 48804041 -17863964 - L1MC2 LINE L1 0 6344 6175 359 273 25 91 chr20 48804042 48804240 -17863765 + HAL1 LINE L1 1975 2159 -348 1342 162 88 69 chr20 48804244 48804589 -17863416 - L1MA9 LINE L1 0 6312 5989 1288 120 10 0 chr20 48804597 48804789 -17863216 - AluJb SINE Alu -32 280 87 537 229 168 48 chr20 48804819 48805111 -17862894 + HAL1 LINE L1 2177 2503 -4 512 304 92 49 chr20 48805169 48805538 -17862467 + L2 LINE L2 2455 2839 -475 215 108 0 162 chr20 48805750 48805824 -17862181 + (T)n Simple_repeat Simple_repeat 1 62 0 1108 131 0 11 chr20 48805836 48806011 -17861994 + FRAM SINE Alu 4 176 0 2262 85 3 10 chr20 48806013 48806319 -17861686 + AluSp SINE Alu 1 304 -9 245 164 370 0 chr20 48806333 48806406 -17861599 + L1MA9 LINE L1 6000 6099 -213 643 194 0 0 chr20 48806409 48806517 -17861488 - AluJ SINE Alu -203 109 2 28 48 0 0 chr20 48807047 48807089 -17860916 + AT_rich Low_complexity Low_complexity 1 42 0 2054 121 10 0 chr20 48807308 48807606 -17860399 - AluSx SINE Alu -11 301 1 357 247 45 87 chr20 48807606 48807870 -17860135 - L1MC2 LINE L1 -303 5818 5659 450 279 179 10 chr20 48807900 48808101 -17859904 - MLT1K LTR MaLR -24 564 330 387 325 114 16 chr20 48808610 48808865 -17859140 - MLT1K LTR MaLR -294 294 15 1094 180 163 54 chr20 48810356 48810644 -17857361 - MLT1D LTR MaLR 0 505 185 1956 146 0 3 chr20 48810644 48810953 -17857052 - AluSx SINE Alu -1 311 4 1572 145 8 11 chr20 48810963 48810997 -17857008 + L1PA8A LINE L1 5297 5330 -801 3490 92 38 4 chr20 48810997 48811495 -17856510 - L1PA13 LINE L1 -11 6152 5638 1572 145 8 11 chr20 48811495 48811529 -17856476 + L1PA8A LINE L1 5330 5363 -768 2122 96 3 13 chr20 48811529 48811841 -17856164 + AluY SINE Alu 1 309 -2 1572 145 8 11 chr20 48811841 48812076 -17855929 + L1PA8A LINE L1 5363 5597 -534 990 193 37 5 chr20 48812076 48812263 -17855742 - MLT1D LTR MaLR -312 193 1 881 249 45 86 chr20 48812276 48812318 -17855687 - MLT1I LTR MaLR -5 404 362 2191 103 0 10 chr20 48812318 48812630 -17855375 + AluSc SINE Alu 1 309 0 881 249 45 86 chr20 48812630 48812671 -17855334 - MLT1I LTR MaLR -47 362 321 2534 48 0 6 chr20 48812671 48812983 -17855022 - AluY SINE Alu -1 310 1 881 249 45 86 chr20 48812983 48813319 -17854686 - MLT1I LTR MaLR -88 321 1 1980 139 149 8 chr20 48813362 48813737 -17854268 + MSTA LTR MaLR 1 428 0 26 0 0 0 chr20 48814070 48814096 -17853909 + AT_rich Low_complexity Low_complexity 1 26 0 334 287 46 56 chr20 48814266 48814461 -17853544 - MIR3 SINE MIR -15 193 1 * 401 209 54 62 chr20 48814461 48814588 -17853417 + MIR SINE MIR 27 152 -56 2011 134 0 0 chr20 48814838 48815136 -17852869 + AluSx SINE Alu 1 298 -14 181 296 112 0 chr20 48815948 48816073 -17851932 + MIR SINE MIR 34 172 -90 259 254 107 49 chr20 48816239 48816361 -17851644 - MIR SINE MIR -119 143 15 1891 137 13 3 chr20 48816756 48817056 -17850949 + AluSx SINE Alu 1 303 -9 207 0 0 0 chr20 48817257 48817280 -17850725 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 775 255 122 17 chr20 48817285 48817415 -17850590 - L2 LINE L2 -21 3292 3177 2446 53 3 3 chr20 48817415 48817718 -17850287 + AluY SINE Alu 1 303 -8 775 255 122 17 chr20 48817718 48818111 -17849894 - L2 LINE L2 -136 3177 2714 1076 258 84 38 chr20 48818118 48818664 -17849341 - MLT1E LTR MaLR -2 591 7 370 319 110 53 chr20 48818665 48818947 -17849058 - L2 LINE L2 -600 2714 2417 26 0 0 0 chr20 48819043 48819069 -17848936 + AT_rich Low_complexity Low_complexity 1 26 0 260 306 83 39 chr20 48820290 48820470 -17847535 + L2 LINE L2 3062 3249 -23 310 336 68 36 chr20 48820960 48821180 -17846825 - MLT1K LTR MaLR -306 282 56 338 333 8 15 chr20 48821187 48821319 -17846686 + L2 LINE L2 3183 3313 0 2160 153 65 32 chr20 48821680 48822092 -17845913 - MSTB LTR MaLR 0 426 1 247 358 17 8 chr20 48822461 48822581 -17845424 - LTR67 LTR ERVL -3 554 434 2054 134 0 0 chr20 48822937 48823250 -17844755 - AluSx SINE Alu 0 313 1 198 294 0 0 chr20 48823461 48823512 -17844493 + L2 LINE L2 3263 3313 0 712 238 58 100 chr20 48823598 48824078 -17843927 + LTR37B LTR ERV1 9 468 0 201 147 0 0 chr20 48824269 48824303 -17843702 + (TTC)n Simple_repeat Simple_repeat 2 35 0 669 309 101 25 chr20 48824403 48824917 -17843088 + LTR67 LTR ERVL 5 557 0 539 273 104 57 chr20 48825623 48826008 -17841997 - MLT1J LTR MaLR -67 444 42 1750 151 80 11 chr20 48826177 48826528 -17841477 + THE1C LTR MaLR 1 375 0 1501 174 3 68 chr20 48826604 48826898 -17841107 + AluJb SINE Alu 1 275 -37 51 0 0 0 chr20 48826904 48826955 -17841050 + AT_rich Low_complexity Low_complexity 1 51 0 21 36 0 0 chr20 48827143 48827171 -17840834 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr20 48827408 48827430 -17840575 + AT_rich Low_complexity Low_complexity 1 22 0 1218 217 58 128 chr20 48827461 48828000 -17840005 - L1MD2 LINE L1 -216 6143 5643 198 71 0 0 chr20 48828059 48828087 -17839918 + (TG)n Simple_repeat Simple_repeat 1 28 0 2009 144 0 7 chr20 48828210 48828501 -17839504 - AluJb SINE Alu -23 289 1 2494 153 30 14 chr20 48828728 48829154 -17838851 - Tigger2a DNA MER2_type 0 434 2 538 294 33 48 chr20 48829430 48829702 -17838303 - MLT1I LTR MaLR -2 407 140 257 221 25 139 chr20 48829725 48829847 -17838158 + MER21B LTR ERV1 352 459 -404 263 323 26 32 chr20 48829870 48830025 -17837980 - MLT1I LTR MaLR -253 156 3 1724 159 11 0 chr20 48831316 48831586 -17836419 - AluJo SINE Alu -39 273 1 400 316 63 38 chr20 48831969 48832206 -17835799 + MLT1L LTR MaLR 205 447 -168 1091 76 0 14 chr20 48832655 48832799 -17835206 - AluSq/x SINE Alu -170 142 1 402 261 71 72 chr20 48833297 48833667 -17834338 + MLT1K LTR MaLR 189 586 -2 508 263 144 26 chr20 48833813 48834007 -17833998 + MIR SINE MIR 22 238 -24 623 279 213 43 chr20 48834351 48834843 -17833162 + MLT1K LTR MaLR 13 588 0 271 200 0 17 chr20 48836118 48836178 -17831827 - MLT1I LTR MaLR -8 401 343 234 204 20 0 chr20 48836755 48836804 -17831201 - Charlie2 DNA MER1_type -140 2722 2673 1024 193 55 40 chr20 48836804 48837078 -17830927 + pTR5 LTR ERV1 746 1023 -1415 981 212 96 18 chr20 48837132 48837467 -17830538 + pTR5 LTR ERV1 984 1344 -1094 4433 130 68 39 chr20 48837483 48838282 -17829723 + LTR12 LTR ERV1 5 826 0 568 229 303 17 chr20 48838282 48838630 -17829375 - Charlie2 DNA MER1_type -184 2678 2230 380 282 99 42 chr20 48838630 48838843 -17829162 - Charlie2 DNA MER1_type -2497 365 141 248 283 11 37 chr20 48839182 48839291 -17828714 + CT-rich Low_complexity Low_complexity 3 182 0 2223 119 0 7 chr20 48839811 48840114 -17827891 + AluSx SINE Alu 2 302 -10 2236 87 0 7 chr20 48840114 48840400 -17827605 + AluSg1 SINE Alu 25 308 -1 29 0 0 0 chr20 48840483 48840512 -17827493 + AT_rich Low_complexity Low_complexity 1 29 0 307 196 0 0 chr20 48840750 48840806 -17827199 - MLT1I LTR MaLR -2 407 352 2558 101 25 0 chr20 48841084 48841439 -17826566 + THE1B LTR MaLR 1 364 0 262 157 39 0 chr20 48841660 48841711 -17826294 + L2 LINE L2 3214 3266 -6 428 259 236 0 chr20 48842335 48842509 -17825496 - MIR SINE MIR -31 231 17 249 253 11 35 chr20 48842744 48842831 -17825174 - MIR SINE MIR -10 252 168 264 130 43 0 chr20 48843248 48843294 -17824711 - L2 LINE L2 0 3272 3225 329 284 11 20 chr20 48843328 48843504 -17824501 + MIR SINE MIR 6 237 -25 1168 92 74 0 chr20 48843702 48843865 -17824140 - AluY SINE Alu 0 311 137 246 239 0 15 chr20 48844112 48844179 -17823826 - MLT1I LTR MaLR -228 181 116 354 327 0 0 chr20 48844245 48844349 -17823656 + MIR SINE MIR 86 189 -73 493 295 159 4 chr20 48845078 48845305 -17822700 + MLT1K LTR MaLR 1 262 -326 423 260 141 23 chr20 48845371 48845548 -17822457 + MLT1K LTR MaLR 373 570 -18 1164 151 0 38 chr20 48845560 48845771 -17822234 - MER1B DNA MER1_type 0 339 137 1370 76 32 116 chr20 48845771 48845947 -17822058 + MER30 DNA MER1_type 1 151 -79 3925 18 18 0 chr20 48845947 48846397 -17821608 + L1PA2 LINE L1 5698 6155 0 1370 76 32 116 chr20 48846397 48846471 -17821534 + MER30 DNA MER1_type 151 230 0 875 166 7 0 chr20 48846471 48846610 -17821395 - MER1B DNA MER1_type -157 140 1 2131 124 3 0 chr20 48847383 48847673 -17820332 - AluSx SINE Alu -21 291 1 29 0 0 0 chr20 48847789 48847818 -17820187 + AT_rich Low_complexity Low_complexity 1 29 0 225 234 96 64 chr20 48847901 48847995 -17820010 + LTR67 LTR ERVL 405 501 -56 1022 291 108 5 chr20 48848497 48848896 -17819109 + MLT1J LTR MaLR 31 470 -41 1201 206 50 5 chr20 48849115 48849590 -17818415 + MER34 LTR ERV1 20 542 0 2145 108 4 0 chr20 48849831 48850110 -17817895 + AluSx SINE Alu 1 280 -32 1127 78 6 17 chr20 48850110 48850290 -17817715 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 44 70 0 0 chr20 48850898 48850984 -17817021 + AT_rich Low_complexity Low_complexity 1 86 0 2539 227 53 37 chr20 48850995 48851858 -17816147 - Charlie2 DNA MER1_type -109 2753 1877 305 221 39 63 chr20 48852022 48852149 -17815856 + LTR33 LTR ERVL 33 156 -365 650 274 157 4 chr20 48852188 48852436 -17815569 + LTR33 LTR ERVL 234 519 -2 1672 67 9 4 chr20 48852442 48852667 -17815338 - L1PA7 LINE L1 -4 6150 5925 463 301 8 0 chr20 48852703 48852826 -17815179 - Charlie2 DNA MER1_type -2652 130 7 2219 108 15 3 chr20 48852837 48852994 -17815011 - L1PB1 LINE L1 -48 6103 5947 2209 132 8 85 chr20 48852994 48853548 -17814457 - L1PA5 LINE L1 -207 5947 5469 23 33 0 0 chr20 48854247 48854277 -17813728 + AT_rich Low_complexity Low_complexity 1 30 0 284 276 97 22 chr20 48854359 48854493 -17813512 + MLT1I LTR MaLR 1 144 -265 181 216 39 20 chr20 48854870 48854921 -17813084 - L2 LINE L2 -6 3307 3256 2340 79 79 0 chr20 48855310 48855628 -17812377 - HERVL-A2 LTR ERVL -5311 343 1 3004 87 4 128 chr20 48855628 48856145 -17811860 - MLT2A2 LTR ERVL 0 453 1 544 312 153 0 chr20 48856372 48856686 -17811319 - L2 LINE L2 -56 3257 2896 1476 203 19 13 chr20 48857245 48857560 -17810445 - LTR53 LTR ERVL 0 519 203 1950 218 32 2 chr20 48857747 48858151 -17809854 + MER68 LTR ERV1 138 553 -9 215 200 0 0 chr20 48858729 48858779 -17809226 - L2 LINE L2 0 3313 3264 496 303 92 80 chr20 48859469 48859945 -17808060 + MLT1K LTR MaLR 85 566 -22 1686 189 3 7 chr20 48860156 48860447 -17807558 + AluJo SINE Alu 1 290 -22 2537 117 54 15 chr20 48860638 48861048 -17806957 - MSTA LTR MaLR 0 428 3 1314 62 351 0 chr20 48861249 48861460 -17806545 + LTR12 LTR ERV1 1 285 -429 322 211 33 11 chr20 48861460 48861550 -17806455 + LTR30 LTR ERV1 552 643 -79 787 81 0 17 chr20 48861551 48861667 -17806338 + LTR12 LTR ERV1 302 714 0 890 265 8 0 chr20 48861684 48861937 -17806068 + L1ME1 LINE L1 894 1148 -5261 * 2153 245 11 15 chr20 48861930 48862665 -17805340 + L1ME1 LINE L1 5302 6031 -743 762 94 0 9 chr20 48862685 48862791 -17805214 + MER4A LTR ERV1 1 105 -559 2620 151 30 44 chr20 48862792 48863289 -17804716 - LTR2B LTR ERV1 0 490 1 2585 122 138 72 chr20 48863289 48863815 -17804190 + MER4A LTR ERV1 98 659 -5 938 262 37 62 chr20 48863816 48864171 -17803834 + L1ME1 LINE L1 6056 6401 -25 22 0 0 0 chr20 48864246 48864268 -17803737 + AT_rich Low_complexity Low_complexity 1 22 0 2186 127 0 0 chr20 48865084 48865375 -17802630 - AluSx SINE Alu -21 291 1 258 284 28 71 chr20 48865456 48865597 -17802408 - MLT1K LTR MaLR 0 588 454 241 292 154 0 chr20 48865803 48865933 -17802072 - MIR SINE MIR -26 236 87 319 328 47 0 chr20 48865933 48866061 -17801944 - MER94 DNA DNA 0 134 1 306 333 42 19 chr20 48866118 48866334 -17801671 - MLT1K LTR MaLR -143 445 225 553 203 126 87 chr20 48866736 48866789 -17801216 - MER58C DNA MER1_type -2205 215 166 2305 92 7 3 chr20 48866789 48867084 -17800921 - AluY SINE Alu -13 298 3 553 203 126 87 chr20 48867084 48867237 -17800768 - MER58C DNA MER1_type -2254 166 1 921 271 104 29 chr20 48867554 48867962 -17800043 + L2 LINE L2 2682 3058 -255 2270 113 35 32 chr20 48867962 48868334 -17799671 + THE1C LTR MaLR 1 373 -2 540 67 27 0 chr20 48868334 48868409 -17799596 - MADE1 DNA Mariner 0 80 4 921 271 104 29 chr20 48868409 48868585 -17799420 + L2 LINE L2 3057 3313 0 409 246 47 63 chr20 48868662 48868853 -17799152 + MLT1K LTR MaLR 386 573 -15 259 235 138 66 chr20 48869110 48869306 -17798699 + MIR SINE MIR 21 230 -32 1312 167 14 9 chr20 48869456 48869678 -17798327 + AluJb SINE Alu 1 223 -89 534 151 0 0 chr20 48869732 48869818 -17798187 + AluJb SINE Alu 221 306 -6 1985 131 60 0 chr20 48869940 48870223 -17797782 + AluSg SINE Alu 1 300 -10 227 268 9 54 chr20 48870261 48870373 -17797632 - MER113 DNA MER1_type? -106 415 309 262 61 41 0 chr20 48871935 48871984 -17796021 + (TTTG)n Simple_repeat Simple_repeat 2 52 0 331 250 38 0 chr20 48871984 48872064 -17795941 + L2 LINE L2 3227 3309 -4 2825 180 3 45 chr20 48872065 48872560 -17795445 + L1MB3 LINE L1 5293 5756 -427 4147 170 24 10 chr20 48872560 48873266 -17794739 + LTR62 LTR ERVK 2 717 -2 2825 180 3 45 chr20 48873266 48873410 -17794595 + L1MB3 LINE L1 5756 5905 -278 2032 141 21 6 chr20 48873412 48873746 -17794259 - MER47A DNA MER2_type -1 365 27 1278 114 39 64 chr20 48873761 48873988 -17794017 + L1MB3 LINE L1 5911 6131 -52 2405 83 0 0 chr20 48873988 48874278 -17793727 + AluSg SINE Alu 1 290 -20 1278 114 39 64 chr20 48874278 48874330 -17793675 + L1MB3 LINE L1 6131 6183 0 1352 238 97 54 chr20 48874709 48874986 -17793019 - MLT1K LTR MaLR -10 578 314 1883 109 15 15 chr20 48874986 48875260 -17792745 + AluSq SINE Alu 40 313 0 1352 238 97 54 chr20 48875260 48875521 -17792484 - MLT1K LTR MaLR -274 314 17 909 249 88 35 chr20 48876307 48876649 -17791356 + MLT1J LTR MaLR 32 391 -120 479 247 171 61 chr20 48876871 48877199 -17790806 - L2 LINE L2 -40 3273 2910 514 308 44 22 chr20 48877245 48877461 -17790544 - MIR SINE MIR -24 238 20 1647 158 0 8 chr20 48877948 48878201 -17789804 + AluJb SINE Alu 1 251 -61 215 358 139 11 chr20 48878542 48878729 -17789276 + L2 LINE L2 2512 2722 -592 419 262 43 48 chr20 48878732 48878919 -17789086 + LTR67 LTR ERVL 4 189 -368 421 266 58 7 chr20 48879042 48879196 -17788809 + LTR67 LTR ERVL 396 557 0 761 297 54 0 chr20 48879745 48879967 -17788038 + MIR SINE MIR 29 262 0 2370 59 0 36 chr20 48879978 48880281 -17787724 - AluY SINE Alu -19 292 1 838 228 70 37 chr20 48880485 48880726 -17787279 + MIR SINE MIR 8 256 -6 621 260 7 7 chr20 48881443 48881589 -17786416 + MIR SINE MIR 3 148 -114 576 307 126 22 chr20 48881658 48881889 -17786116 - MIR SINE MIR -6 256 2 814 284 65 38 chr20 48882069 48882512 -17785493 - MLT1L LTR MaLR -6 609 155 548 292 166 35 chr20 48882668 48883103 -17784902 - MLT1J LTR MaLR -19 492 1 236 328 66 16 chr20 48883298 48883420 -17784585 - MIR3 SINE MIR -79 129 2 1723 238 37 35 chr20 48884536 48885028 -17782977 + MLT1D LTR MaLR 3 495 -10 401 351 24 19 chr20 48885298 48885503 -17782502 - MIR SINE MIR -1 261 56 446 236 87 31 chr20 48885603 48885730 -17782275 - MER94 DNA DNA 0 134 1 214 382 0 0 chr20 48885826 48885894 -17782111 + MIR SINE MIR 28 96 -112 1910 160 17 7 chr20 48886067 48886367 -17781638 + AluJo SINE Alu 1 303 -9 265 287 183 0 chr20 48886795 48886910 -17781095 + L2 LINE L2 2590 2725 -589 406 264 170 22 chr20 48887028 48887210 -17780795 + L2 LINE L2 3104 3312 -1 348 127 0 0 chr20 48887217 48887272 -17780733 + (GGGA)n Simple_repeat Simple_repeat 4 58 0 712 257 53 58 chr20 48887704 48887930 -17780075 + MIR SINE MIR 10 234 -28 376 260 14 0 chr20 48888146 48888292 -17779713 + (CCCA)n Simple_repeat Simple_repeat 3 150 0 790 244 26 49 chr20 48888337 48888627 -17779378 + L2 LINE L2 2775 3061 -252 1315 224 43 0 chr20 48888634 48888911 -17779094 - AluJo SINE Alu -23 289 1 749 190 0 0 chr20 48888926 48889047 -17778958 - FLAM_C SINE Alu -21 122 2 664 270 46 46 chr20 48889047 48889310 -17778695 + L2 LINE L2 3051 3313 0 362 360 54 43 chr20 48889458 48889736 -17778269 - L1 LINE L1 -1071 5075 4795 1901 171 0 0 chr20 48890090 48890395 -17777610 - AluJb SINE Alu -7 305 1 950 287 17 0 chr20 48890893 48891130 -17776875 - MIR SINE MIR -21 241 1 307 77 0 0 chr20 48892119 48892171 -17775834 - AluSp/q SINE Alu 0 303 252 1685 269 64 35 chr20 48892237 48892414 -17775591 + L2 LINE L2 2163 2333 -981 1837 190 14 24 chr20 48892414 48892783 -17775222 + MLT1A1 LTR MaLR 1 365 0 1685 269 64 35 chr20 48892783 48893201 -17774804 + L2 LINE L2 2333 2775 -539 1853 148 74 14 chr20 48893318 48893670 -17774335 + THE1C LTR MaLR 3 375 0 2322 89 0 29 chr20 48894055 48894371 -17773634 - AluY SINE Alu -4 307 1 2382 89 0 0 chr20 48894376 48894700 -17773305 - AluY SINE Alu 0 324 1 203 331 28 35 chr20 48894935 48895080 -17772925 + L2 LINE L2 2328 2471 -843 2356 82 0 23 chr20 48895156 48895459 -17772546 + AluSx SINE Alu 1 296 -16 2216 132 0 3 chr20 48895662 48895966 -17772039 + AluSx SINE Alu 5 307 -5 430 249 52 108 chr20 48896023 48896149 -17771856 - MLT1J LTR MaLR -175 336 229 2334 157 44 2 chr20 48896149 48896558 -17771447 - MSTB LTR MaLR 0 426 1 430 249 52 108 chr20 48896558 48896680 -17771325 - MLT1J LTR MaLR -282 229 102 422 217 109 0 chr20 48896781 48896919 -17771086 - L1ME LINE L1 -439 5682 5530 335 315 8 0 chr20 48897320 48897447 -17770558 - L2 LINE L2 -314 2999 2872 570 233 0 0 chr20 48897449 48897552 -17770453 - MER81 DNA DNA -1 113 11 273 358 0 0 chr20 48897547 48897642 -17770363 - MER81 DNA DNA -19 95 1 * 284 285 145 30 chr20 48897724 48898056 -17769949 + MLT1J LTR MaLR 75 410 -40 207 313 10 40 chr20 48898069 48898168 -17769837 - L2 LINE L2 -428 2886 2791 400 314 87 30 chr20 48905244 48905508 -17762497 + L2 LINE L2 2698 2976 -338 244 239 37 142 chr20 48905510 48905728 -17762277 + L2 LINE L2 2842 3036 -236 313 128 0 0 chr20 48905861 48905908 -17762097 + MADE1 DNA Mariner 1 47 -33 277 109 0 73 chr20 48905939 48905994 -17762011 + MADE1 DNA Mariner 30 80 0 229 273 220 30 chr20 48905998 48906130 -17761875 + L2 LINE L2 3155 3311 -2 257 250 65 97 chr20 48906667 48906883 -17761122 - MLT1L LTR MaLR -272 343 135 847 275 116 38 chr20 48907424 48907821 -17760184 + MER90 LTR ERV1 148 575 0 494 280 13 39 chr20 48907897 48908129 -17759876 + L1MC5 LINE L1 7306 7531 -430 378 293 98 63 chr20 48908207 48908412 -17759593 + L1ME3A LINE L1 5959 6170 0 427 331 60 5 chr20 48908455 48908639 -17759366 - L2 LINE L2 -657 2657 2464 352 225 45 72 chr20 48908963 48909074 -17758931 - L1M4 LINE L1 -2473 3673 3566 1392 204 0 25 chr20 48909500 48909780 -17758225 - AluJo SINE Alu -39 273 1 7465 171 12 12 chr20 48910645 48912154 -17755851 - L1MB1 LINE L1 -787 5359 3851 4320 150 18 15 chr20 48912155 48912949 -17755056 + L1MB1 LINE L1 5373 6168 0 755 298 76 43 chr20 48913943 48914457 -17753548 - MLT1L LTR MaLR -77 538 8 186 222 0 44 chr20 48914562 48914607 -17753398 + MIR SINE MIR 30 72 -136 885 256 136 54 chr20 48914654 48915192 -17752813 + LTR1B LTR ERV1 33 614 -212 265 319 44 9 chr20 48915410 48915523 -17752482 + MER20B DNA MER1_type 28 144 -639 344 265 68 6 chr20 48916433 48916595 -17751410 + LTR33 LTR ERVL 3 174 -347 442 217 159 0 chr20 48917096 48917234 -17750771 - MER5B DNA MER1_type -10 168 9 194 311 85 107 chr20 48917236 48917341 -17750664 - L2 LINE L2 -47 3225 3119 4156 144 8 3 chr20 48917341 48917973 -17750032 - MER41B LTR ERV1 0 635 1 194 311 85 107 chr20 48917973 48918195 -17749810 - L2 LINE L2 -153 3119 2905 342 245 207 24 chr20 48918202 48918476 -17749529 + L2 LINE L2 2728 3055 -217 1113 149 0 18 chr20 48918523 48918691 -17749314 - AluSg/x SINE Alu -18 292 128 247 251 118 56 chr20 48919097 48919292 -17748713 - MLT1J LTR MaLR -18 493 287 3166 156 74 60 chr20 48919401 48920118 -17747887 + LTR8A LTR ERV1 1 727 0 247 273 25 50 chr20 48920129 48920250 -17747755 + HAL1 LINE L1 2347 2464 -43 344 287 90 15 chr20 48920867 48921003 -17747002 + MIR3 SINE MIR 10 156 -52 1273 134 14 18 chr20 48921398 48921615 -17746390 - MER20 DNA MER1_type -2 217 2 278 351 18 0 chr20 48921624 48921738 -17746267 - MIR SINE MIR -73 135 20 248 293 43 43 chr20 48922997 48923096 -17744909 + MIR SINE MIR 33 134 -128 228 35 0 0 chr20 48923096 48923125 -17744880 + (TG)n Simple_repeat Simple_repeat 2 30 0 248 293 43 43 chr20 48923125 48923141 -17744864 + MIR SINE MIR 133 148 -114 296 221 52 13 chr20 48923156 48923233 -17744772 - MER116 DNA Mariner 0 80 1 204 282 0 26 chr20 48923245 48923323 -17744682 + MIR SINE MIR 187 262 0 2126 155 47 27 chr20 48923417 48923954 -17744051 - MLT2A2 LTR ERVL -2 552 1 542 314 69 5 chr20 48924271 48924459 -17743546 + MIR SINE MIR 57 256 -6 201 222 0 0 chr20 48925600 48925663 -17742342 + (CAGAGA)n Simple_repeat Simple_repeat 2 64 0 871 213 56 0 chr20 48926049 48926246 -17741759 + MIR SINE MIR 2 209 -53 263 252 58 86 chr20 48926302 48926441 -17741564 + MIR SINE MIR 50 184 -78 215 253 32 53 chr20 48926454 48926549 -17741456 + L2 LINE L2 3151 3243 -70 735 219 55 0 chr20 48926562 48926708 -17741297 + MER45A DNA AcHobo 1 154 -24 974 268 66 36 chr20 48927061 48927502 -17740503 - MLT1C LTR MaLR -2 465 12 542 299 56 26 chr20 48927588 48927822 -17740183 - MIR SINE MIR -21 241 1 226 376 101 0 chr20 48927957 48928106 -17739899 - Charlie8 DNA MER1_type -2249 168 5 817 279 97 74 chr20 48928891 48929365 -17738640 + MLT1K LTR MaLR 97 581 -7 222 328 16 0 chr20 48930065 48930129 -17737876 - L2 LINE L2 0 3272 3208 226 290 16 0 chr20 48930211 48930273 -17737732 - MER117 DNA MER1_type -33 164 102 330 299 38 25 chr20 48930307 48930464 -17737541 - MLT1I LTR MaLR 0 409 251 820 200 83 24 chr20 48930470 48930565 -17737440 - MER20 DNA MER1_type 0 219 131 2581 155 26 7 chr20 48930565 48931023 -17736982 + MLT1C LTR MaLR 1 467 0 820 200 83 24 chr20 48931023 48931132 -17736873 - MER20 DNA MER1_type -88 131 3 353 258 21 11 chr20 48931176 48931269 -17736736 - MLT1H LTR MaLR -347 202 109 271 273 39 0 chr20 48932263 48932340 -17735665 + MIR SINE MIR 6 85 -177 342 317 75 28 chr20 48932340 48932590 -17735415 + MLT1F1 LTR MaLR 1 249 -341 387 281 13 20 chr20 48933039 48933192 -17734813 + GA-rich Low_complexity Low_complexity 2 153 0 296 296 108 33 chr20 48934056 48934296 -17733709 - L2 LINE L2 -61 3252 2995 3326 145 65 47 chr20 48934608 48935312 -17732693 - LTR8A LTR ERV1 -2 725 9 4117 126 10 2 chr20 48935318 48935946 -17732059 + MER41B LTR ERV1 1 633 -2 187 319 87 0 chr20 48936223 48936292 -17731713 - MIR3 SINE MIR -49 159 85 244 123 0 53 chr20 48936464 48936521 -17731484 + (TCCC)n Simple_repeat Simple_repeat 3 56 0 439 243 28 42 chr20 48937252 48937396 -17730609 - L2 LINE L2 -9 3304 3163 218 268 0 6 chr20 48937923 48938091 -17729914 + (TG)n Simple_repeat Simple_repeat 1 167 0 2305 88 7 0 chr20 48938238 48938573 -17729432 + AluSq SINE Alu 1 337 0 226 264 0 0 chr20 48940288 48940341 -17727664 + MIR SINE MIR 210 262 0 398 274 132 59 chr20 48940375 48940411 -17727594 + MER113 DNA MER1_type? 5 37 -484 1779 120 71 8 chr20 48940411 48940714 -17727291 - AluJb SINE Alu 0 320 1 398 274 132 59 chr20 48940714 48941048 -17726957 + MER113 DNA MER1_type? 37 403 -118 260 132 59 73 chr20 48941250 48941318 -17726687 + MIR3 SINE MIR 121 187 -21 816 239 97 0 chr20 48941703 48941941 -17726064 + LTR43 LTR ERV1 176 436 -166 450 208 0 0 chr20 48942312 48942466 -17725539 + (CA)n Simple_repeat Simple_repeat 2 155 0 343 147 0 21 chr20 48942479 48942574 -17725431 + (CA)n Simple_repeat Simple_repeat 1 93 0 213 298 18 0 chr20 48942574 48942631 -17725374 + L2 LINE L2 3200 3257 -56 627 315 102 3 chr20 48942647 48942942 -17725063 - L2 LINE L2 0 3313 2990 467 300 91 9 chr20 48942969 48943179 -17724826 + L2 LINE L2 3085 3311 -2 931 188 48 10 chr20 48943751 48943959 -17724046 - MIR SINE MIR -16 246 31 698 221 40 7 chr20 48944391 48944612 -17723393 + MIR SINE MIR 19 248 -14 487 300 120 34 chr20 48945701 48946084 -17721921 - L1ME3A LINE L1 -272 5898 5483 464 296 54 10 chr20 48946243 48946446 -17721559 + MIR SINE MIR 35 246 -16 332 264 81 7 chr20 48946950 48947098 -17720907 - MER113 DNA MER1_type? -55 466 308 1744 169 15 0 chr20 48947099 48947402 -17720603 - AluJo SINE Alu 0 313 7 2309 104 0 0 chr20 48947415 48947704 -17720301 - AluSx SINE Alu -17 295 7 1331 189 43 105 chr20 48948078 48948388 -17719617 - L1MB7 LINE L1 -7 6177 5849 228 35 0 0 chr20 48948388 48948417 -17719588 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 1730 188 0 0 chr20 48948426 48948702 -17719303 - AluJo SINE Alu -36 276 1 1331 189 43 105 chr20 48948702 48948846 -17719159 - L1MB7 LINE L1 -343 5841 5742 237 218 0 0 chr20 48948849 48948927 -17719078 + GA-rich Low_complexity Low_complexity 1 78 0 291 291 53 53 chr20 48948995 48949146 -17718859 + MIR3 SINE MIR 43 193 -15 268 250 17 67 chr20 48949287 48949407 -17718598 - MLT1K LTR MaLR -10 578 465 * 276 331 99 23 chr20 48949394 48949566 -17718439 - MER45C DNA AcHobo -507 446 262 438 204 21 0 chr20 48949596 48949689 -17718316 - MER45C DNA AcHobo -785 168 74 223 241 0 58 chr20 48950163 48950250 -17717755 + C-rich Low_complexity Low_complexity 3 84 0 476 284 73 61 chr20 48950902 48951163 -17716842 - L2 LINE L2 -9 3304 3041 788 292 115 7 chr20 48951221 48951563 -17716442 + MLT1J2 LTR MaLR 1 391 -55 490 237 21 0 chr20 48951588 48951685 -17716320 - MER81 DNA DNA -15 99 1 458 287 41 51 chr20 48951733 48951928 -17716077 - MIR SINE MIR -67 195 3 192 419 43 8 chr20 48952145 48952262 -17715743 + L2 LINE L2 3141 3261 -11 1050 259 119 9 chr20 48952970 48953313 -17714692 + MLT1K LTR MaLR 181 561 -27 417 215 96 57 chr20 48953546 48953723 -17714282 + LTR33A LTR ERVL 6 189 -334 569 302 72 68 chr20 48954857 48955122 -17712883 + MER21B LTR ERV1 338 603 -260 851 259 70 62 chr20 48955454 48955828 -17712177 - MER21B LTR ERV1 -169 694 318 758 286 74 95 chr20 48955989 48956517 -17711488 + MLT1K LTR MaLR 2 518 -70 192 40 0 0 chr20 48956524 48956549 -17711456 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 205 357 64 52 chr20 48956791 48957231 -17710774 + L2 LINE L2 210 654 -2660 539 271 128 0 chr20 48957265 48957453 -17710552 + MIR SINE MIR 51 262 0 2641 96 3 0 chr20 48957922 48958285 -17709720 + THE1B LTR MaLR 1 364 0 1212 322 61 11 chr20 48959551 48960076 -17707929 - MLT1K LTR MaLR 0 588 38 303 28 0 0 chr20 48960124 48960160 -17707845 + (A)n Simple_repeat Simple_repeat 1 36 0 790 259 67 13 chr20 48960504 48960817 -17707188 - MER113 DNA MER1_type? -44 477 148 862 188 40 10 chr20 48960859 48961061 -17706944 - L1MB3 LINE L1 0 6183 5976 314 265 114 15 chr20 48961221 48961353 -17706652 - L3 LINE CR1 -73 1504 1360 460 293 131 16 chr20 48961522 48961713 -17706292 + MLT1K LTR MaLR 16 228 -360 521 262 110 0 chr20 48961996 48962160 -17705845 - MIR SINE MIR -59 203 22 815 272 39 45 chr20 48963253 48963565 -17704440 + MLT1J LTR MaLR 3 312 -199 474 188 0 0 chr20 48963583 48963668 -17704337 + MER2 DNA MER2_type 38 122 -223 285 330 28 50 chr20 48963670 48963852 -17704153 + MLT1J LTR MaLR 334 511 0 651 282 174 28 chr20 48964619 48965044 -17702961 + L2 LINE L2 2826 3312 -1 199 291 76 0 chr20 48965089 48965168 -17702837 + MIR SINE MIR 66 150 -112 338 341 92 39 chr20 48965405 48965742 -17702263 - L2 LINE L2 -2 3270 2916 1635 212 24 5 chr20 48965929 48966307 -17701698 - L1MB7 LINE L1 0 6184 5800 267 289 82 15 chr20 48966363 48966498 -17701507 + L2 LINE L2 2814 2957 -357 1512 181 23 7 chr20 48966516 48966815 -17701190 + MER2 DNA MER2_type 42 345 0 226 0 59 0 chr20 48966832 48966866 -17701139 + (TTTTG)n Simple_repeat Simple_repeat 5 40 0 1863 100 0 62 chr20 48966866 48967126 -17700879 - AluSx SINE Alu -32 280 37 2163 193 16 0 chr20 48967137 48967568 -17700437 - L1MB7 LINE L1 -404 5774 5337 1045 195 54 61 chr20 48967548 48967861 -17700144 - L1M4 LINE L1 -6218 324 14 * 613 239 71 41 chr20 48967886 48968083 -17699922 - MIR SINE MIR -1 261 59 210 265 7 125 chr20 48968594 48968730 -17699275 + L2 LINE L2 3153 3272 0 3481 134 14 5 chr20 48968767 48969332 -17698673 - LTR24B LTR ERV1 -6 570 1 275 302 48 24 chr20 48969375 48969501 -17698504 - MIR SINE MIR 0 262 134 771 229 115 18 chr20 48969767 48969985 -17698020 - MIR SINE MIR -23 239 1 522 292 144 77 chr20 48970077 48970557 -17697448 - MLT1K LTR MaLR 0 588 77 183 316 25 13 chr20 48971004 48971083 -17696922 - MIR SINE MIR -32 230 151 384 222 116 80 chr20 48971214 48971439 -17696566 + MLT1L LTR MaLR 107 339 -276 775 282 122 10 chr20 48971440 48972128 -17695877 + L2 LINE L2 2544 3313 0 186 200 0 0 chr20 48972350 48972390 -17695615 - MIR SINE MIR -191 71 32 365 240 30 10 chr20 48973265 48973365 -17694640 - MLT2C2 LTR ERVL -3 461 360 225 0 0 0 chr20 48973757 48973782 -17694223 + (TCC)n Simple_repeat Simple_repeat 2 26 0 699 308 151 7 chr20 48973872 48974317 -17693688 + L2 LINE L2 2538 3045 -268 1936 197 63 25 chr20 48974317 48974374 -17693631 - MLT2C2 LTR ERVL 0 464 411 270 0 0 0 chr20 48974374 48974404 -17693601 + (GA)n Simple_repeat Simple_repeat 1 30 0 1936 197 63 25 chr20 48974404 48974598 -17693407 - MLT2C2 LTR ERVL -53 411 226 2206 141 0 24 chr20 48974598 48974939 -17693066 - MER1B DNA MER1_type 0 337 5 1936 197 63 25 chr20 48974939 48975132 -17692873 - MLT2C2 LTR ERVL -238 226 2 1214 267 72 8 chr20 48975239 48975614 -17692391 + LTR16C LTR ERVL 87 485 -6 361 276 0 0 chr20 48976376 48976463 -17691542 - MLT1L LTR MaLR -5 610 524 301 228 50 50 chr20 48976506 48976607 -17691398 + L2 LINE L2 3197 3297 -16 2289 103 0 19 chr20 48976691 48977010 -17690995 + AluSq SINE Alu 1 313 0 1016 275 98 23 chr20 48978003 48978475 -17689530 - L2 LINE L2 -2 3311 2805 381 307 18 26 chr20 48978509 48978623 -17689382 - L2 LINE L2 0 3313 3201 447 246 120 0 chr20 48981193 48981335 -17686670 + MIR SINE MIR 32 190 -72 430 294 82 30 chr20 48981336 48981567 -17686438 + L2 LINE L2 3003 3245 -68 1257 260 45 72 chr20 48981567 48982120 -17685885 + MER34 LTR ERV1 2 539 -3 187 289 0 60 chr20 48982122 48982205 -17685800 + L2 LINE L2 3195 3272 0 551 294 83 48 chr20 48982340 48983034 -17684971 - L2 LINE L2 -1 3312 2545 1097 267 80 29 chr20 48984638 48984724 -17683281 + L2 LINE L2 2439 2519 -794 1618 197 70 12 chr20 48984724 48985069 -17682936 - MLT1A1 LTR MaLR 0 365 1 1097 267 80 29 chr20 48985069 48985608 -17682397 + L2 LINE L2 2519 3105 -208 252 0 0 0 chr20 48985608 48985636 -17682369 + (CA)n Simple_repeat Simple_repeat 1 28 0 1097 267 80 29 chr20 48985636 48985810 -17682195 + L2 LINE L2 3105 3269 -44 1151 107 6 0 chr20 48985827 48986005 -17682000 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 554 311 91 8 chr20 48986290 48986531 -17681474 + MER102b DNA MER1_type 39 299 -42 493 257 63 59 chr20 48986930 48987152 -17680853 - MIR SINE MIR -31 231 9 404 304 52 44 chr20 48987640 48987910 -17680095 - MER20B DNA MER1_type -44 739 468 2103 113 20 0 chr20 48988023 48988325 -17679680 + AluSp SINE Alu 1 308 -5 666 267 93 10 chr20 48988460 48988771 -17679234 + LTR16C LTR ERVL 154 490 -1 350 304 41 23 chr20 48988774 48988945 -17679060 - MER20B DNA MER1_type -515 268 95 742 246 60 102 chr20 48989241 48989594 -17678411 + MER102b DNA MER1_type 1 338 -3 702 302 29 8 chr20 48989764 48990006 -17677999 + MIR SINE MIR 1 247 -15 309 109 0 0 chr20 48990227 48990273 -17677732 + (ATG)n Simple_repeat Simple_repeat 3 48 0 489 310 132 10 chr20 48990423 48990620 -17677385 - MIR SINE MIR -21 241 21 239 102 0 20 chr20 48990964 48991013 -17676992 + (TCTCC)n Simple_repeat Simple_repeat 4 51 0 981 242 194 29 chr20 48991096 48991514 -17676491 - MLT1K LTR MaLR -16 572 86 521 224 66 31 chr20 48991544 48991740 -17676265 + LTR67 LTR ERVL 328 530 -27 364 274 19 0 chr20 48991770 48991876 -17676129 - MIR SINE MIR -62 146 39 196 358 138 0 chr20 48992470 48992688 -17675317 + L2 LINE L2 2548 2795 -519 273 269 67 20 chr20 48992694 48992843 -17675162 + LTR33 LTR ERVL 1 156 -365 274 205 41 33 chr20 48992910 48993015 -17674990 + L2 LINE L2 2882 2985 -287 215 340 45 32 chr20 48993045 48993201 -17674804 - L2 LINE L2 -911 2403 2246 198 333 11 11 chr20 48993398 48993488 -17674517 + L2 LINE L2 3183 3272 0 314 301 115 19 chr20 48994610 48994766 -17673239 + MIR SINE MIR 79 249 -13 2590 29 7 3 chr20 48994936 48995246 -17672759 + AluY SINE Alu 1 311 0 294 326 0 11 chr20 48995564 48995656 -17672349 - L2 LINE L2 -2 3311 3221 558 250 23 34 chr20 48995765 48995941 -17672064 - MIR SINE MIR -60 202 29 222 136 0 0 chr20 48995954 48995998 -17672007 + (TGAA)n Simple_repeat Simple_repeat 2 45 0 883 273 85 18 chr20 48996200 48996818 -17671187 + L2 LINE L2 2601 3261 -52 2287 87 3 0 chr20 48996855 48997153 -17670852 + AluSq SINE Alu 2 300 -13 186 343 10 40 chr20 48997487 48997586 -17670419 + L2 LINE L2 3209 3304 -9 841 285 155 8 chr20 48997639 48998052 -17669953 - L2 LINE L2 -276 3037 2580 304 206 15 118 chr20 48998806 48998862 -17669143 - MLT1K LTR MaLR -22 566 506 1845 142 4 0 chr20 48998862 48999137 -17668868 + AluSx SINE Alu 37 312 0 304 206 15 118 chr20 48999137 48999216 -17668789 - MLT1K LTR MaLR -82 506 445 257 303 79 0 chr20 48999423 48999512 -17668493 - MER91A DNA MER1_type 0 196 101 392 308 17 0 chr20 48999542 48999662 -17668343 - MLT1K LTR MaLR -421 167 46 1226 219 81 74 chr20 48999744 48999808 -17668197 - MSTD LTR MaLR 0 396 334 1783 170 0 34 chr20 48999808 49000131 -17667874 + AluJb SINE Alu 1 312 0 1226 219 81 74 chr20 49000131 49000408 -17667597 - MSTD LTR MaLR -62 334 49 1684 177 0 22 chr20 49000408 49000719 -17667286 - AluJb SINE Alu -8 304 1 1226 219 81 74 chr20 49000719 49000769 -17667236 - MSTD LTR MaLR -347 49 1 995 258 100 11 chr20 49000776 49001334 -17666671 - L2 LINE L2 -129 3184 2507 1158 253 37 6 chr20 49001796 49002124 -17665881 - MLT1K LTR MaLR -33 555 218 1030 229 181 54 chr20 49002124 49002566 -17665439 + MLT1D LTR MaLR 1 498 -7 257 292 62 0 chr20 49002582 49002678 -17665327 - MLT1K LTR MaLR -381 207 106 574 330 80 9 chr20 49003599 49003811 -17664194 + MIR SINE MIR 25 251 -11 315 314 58 7 chr20 49004260 49004397 -17663608 - MIR3 SINE MIR 0 208 65 2142 106 0 0 chr20 49005437 49005746 -17662259 + AluSx SINE Alu 1 309 0 480 355 57 5 chr20 49005746 49005957 -17662048 - MIR SINE MIR -8 254 33 2090 100 13 13 chr20 49006013 49006324 -17661681 + AluSq SINE Alu 1 311 -2 248 301 82 49 chr20 49006786 49006969 -17661036 + MIR SINE MIR 74 262 0 2498 83 83 6 chr20 49007671 49008008 -17659997 - THE1B LTR MaLR 0 364 2 361 209 35 26 chr20 49008195 49008310 -17659695 - L2 LINE L2 -895 2419 2304 357 240 91 16 chr20 49008858 49008979 -17659026 - MIR SINE MIR -61 147 18 445 288 135 21 chr20 49009251 49009532 -17658473 + MLT1K LTR MaLR 93 405 -183 587 300 12 6 chr20 49009743 49009913 -17658092 - MLT1K LTR MaLR -267 321 151 497 254 130 6 chr20 49010385 49010554 -17657451 + MIR SINE MIR 59 248 -14 717 322 57 14 chr20 49010674 49010908 -17657097 + L2 LINE L2 2712 2934 -379 2614 114 14 3 chr20 49010908 49011268 -17656737 + THE1B LTR MaLR 1 364 0 717 322 57 14 chr20 49011268 49011463 -17656542 + L2 LINE L2 2934 3179 -134 2008 170 96 15 chr20 49011843 49012238 -17655767 - MSTA LTR MaLR -1 427 1 202 187 286 22 chr20 49012572 49012663 -17655342 - L2 LINE L2 0 3272 3158 761 310 25 22 chr20 49012847 49013215 -17654790 - L1ME2 LINE L1 -10 6154 5786 1057 219 5 18 chr20 49013225 49013444 -17654561 + AluJo SINE Alu 1 216 -96 1405 163 0 0 chr20 49013563 49013790 -17654215 - AluJb SINE Alu 0 312 86 1397 201 25 94 chr20 49013791 49014183 -17653822 + MLT1A1 LTR MaLR 1 365 0 387 0 0 0 chr20 49015694 49015737 -17652268 + (TG)n Simple_repeat Simple_repeat 1 43 0 1294 267 52 10 chr20 49015854 49016408 -17651597 + L2 LINE L2 2576 3154 -159 488 264 189 61 chr20 49016830 49017126 -17650879 + Charlie8 DNA MER1_type 92 425 -1992 673 270 34 46 chr20 49017902 49018061 -17649944 + MIR SINE MIR 21 178 -84 1919 183 140 41 chr20 49018061 49018366 -17649639 - MER34 LTR ERV1 0 542 168 2495 62 0 0 chr20 49018366 49018674 -17649331 + AluY SINE Alu 1 308 -3 1919 183 140 41 chr20 49018674 49018860 -17649145 - MER34 LTR ERV1 -374 168 2 673 270 34 46 chr20 49018860 49018937 -17649068 + MIR SINE MIR 178 254 -8 391 282 109 82 chr20 49019010 49019081 -17648924 + MER102a DNA MER1_type 29 97 -1320 1820 153 30 0 chr20 49019081 49019382 -17648623 - AluSx SINE Alu -2 310 1 391 282 109 82 chr20 49019382 49019604 -17648401 + MER102a DNA MER1_type 97 330 0 894 312 63 11 chr20 49020801 49021275 -17646730 + L2 LINE L2 2369 2867 -447 325 298 204 12 chr20 49021624 49021879 -17646126 - MER113 DNA MER1_type? -62 459 156 2843 128 9 39 chr20 49022343 49022802 -17645203 + MER65A LTR ERV1 1 445 0 543 53 0 0 chr20 49023148 49023223 -17644782 + (TG)n Simple_repeat Simple_repeat 2 76 0 184 281 31 47 chr20 49023478 49023542 -17644463 + MIR SINE MIR 15 77 -185 580 321 49 8 chr20 49023936 49024182 -17643823 + L2 LINE L2 2586 2841 -473 208 306 19 19 chr20 49024688 49024796 -17643209 + L2 LINE L2 2782 2889 -425 1928 125 0 17 chr20 49025509 49025835 -17642170 - AluSx SINE Alu 0 321 1 233 323 71 20 chr20 49025878 49025977 -17642028 + MIR3 SINE MIR 53 156 -52 189 0 0 0 chr20 49026097 49026118 -17641887 + (GA)n Simple_repeat Simple_repeat 2 22 0 237 320 66 8 chr20 49026462 49026584 -17641421 + L2 LINE L2 2598 2726 -588 205 299 160 21 chr20 49026686 49026880 -17641125 + L2 LINE L2 2708 2928 -386 2348 228 104 51 chr20 49026918 49027685 -17640320 - MER21B LTR ERV1 -51 812 5 1134 285 65 8 chr20 49027703 49028072 -17639933 + L2 LINE L2 2924 3313 0 2415 129 67 48 chr20 49028478 49028871 -17639134 + MSTC LTR MaLR 1 404 -24 5186 135 24 33 chr20 49028871 49029425 -17638580 + MER4D LTR ERV1 1 545 -358 1923 137 13 0 chr20 49029425 49029724 -17638281 - AluSx SINE Alu -9 303 1 5186 135 24 33 chr20 49029724 49030080 -17637925 + MER4D LTR ERV1 545 903 0 2415 129 67 48 chr20 49030080 49030106 -17637899 + MSTC LTR MaLR 404 428 0 361 265 73 20 chr20 49030106 49030257 -17637748 + LTR33 LTR ERVL 237 395 -126 657 260 24 18 chr20 49030257 49030426 -17637579 + MIR SINE MIR 93 262 0 279 388 62 0 chr20 49030476 49030654 -17637351 - MIR SINE MIR -62 200 12 452 157 26 9 chr20 49030705 49030806 -17637199 - MER20 DNA MER1_type -57 162 59 320 215 0 0 chr20 49030767 49030832 -17637173 + MER20 DNA MER1_type 155 219 0 * 1458 172 80 36 chr20 49030856 49031158 -17636847 + L1MDa LINE L1 2244 2568 -3972 2382 126 83 5 chr20 49031158 49031555 -17636450 - MSTA LTR MaLR 0 428 1 1458 172 80 36 chr20 49031555 49031642 -17636363 + L1MDa LINE L1 2568 2650 -3890 * 7029 238 55 47 chr20 49031640 49032287 -17635718 + L1MD2 LINE L1 2010 2650 -3890 2014 130 0 3 chr20 49032287 49032587 -17635418 + AluSq SINE Alu 1 299 -14 7029 238 55 47 chr20 49032587 49034953 -17633052 + L1MD2 LINE L1 2650 5034 -1506 226 235 39 0 chr20 49035069 49035120 -17632885 - L1MDb LINE L1 -6161 382 330 651 257 12 64 chr20 49035347 49035596 -17632409 - L1MDb LINE L1 -6271 269 34 2310 208 42 6 chr20 49035611 49036323 -17631682 + L1MD2 LINE L1 5976 6751 -2 242 256 20 128 chr20 49036439 49036472 -17631533 + MER113 DNA MER1_type? 337 372 -149 1944 118 38 0 chr20 49036472 49036760 -17631245 - AluSx SINE Alu -13 299 1 242 256 20 128 chr20 49036760 49036929 -17631076 + MER113 DNA MER1_type? 372 517 -4 261 298 24 12 chr20 49038315 49038399 -17629606 + L2 LINE L2 3187 3271 -1 1720 169 7 0 chr20 49040299 49040583 -17627422 - AluJb SINE Alu -26 286 1 262 322 78 39 chr20 49040710 49040890 -17627115 + MIR SINE MIR 6 192 -70 184 348 169 8 chr20 49041080 49041198 -17626807 - L2 LINE L2 -2 3270 3134 306 321 33 43 chr20 49041420 49041604 -17626401 + L1MCa LINE L1 7 188 -6238 1030 222 43 0 chr20 49041681 49041888 -17626117 + MER20 DNA MER1_type 4 219 0 938 276 98 8 chr20 49041890 49042310 -17625695 + L2 LINE L2 2585 3043 -270 345 136 0 17 chr20 49042339 49042398 -17625607 + L2 LINE L2 3256 3313 0 225 315 63 16 chr20 49042503 49042630 -17625375 + MIR3 SINE MIR 13 145 -63 392 173 37 12 chr20 49042657 49042738 -17625267 - L2 LINE L2 -5 3267 3185 841 217 28 38 chr20 49042748 49042960 -17625045 - MLT1E3 LTR MaLR -24 600 391 380 223 156 3 chr20 49042987 49043161 -17624844 - MLT1E2 LTR MaLR -360 266 6 1004 304 72 27 chr20 49043166 49043636 -17624369 - L2 LINE L2 -324 2989 2494 682 233 48 0 chr20 49044276 49044422 -17623583 + MER45A DNA AcHobo 6 158 -20 1577 173 39 0 chr20 49045016 49045143 -17622862 + AluJo SINE Alu 3 124 -188 234 0 0 0 chr20 49045143 49045169 -17622836 + (CAA)n Simple_repeat Simple_repeat 2 27 0 1577 173 39 0 chr20 49045169 49045300 -17622705 + AluJo SINE Alu 124 275 -37 189 0 0 0 chr20 49045300 49045321 -17622684 + (GA)n Simple_repeat Simple_repeat 2 22 0 1577 173 39 0 chr20 49045321 49045345 -17622660 + AluJo SINE Alu 275 297 -15 639 160 70 51 chr20 49045850 49046006 -17621999 - LTR45B LTR ERV1 0 489 331 266 250 0 24 chr20 49046221 49046305 -17621700 - MER72 LTR ERV1 -243 479 398 216 301 29 58 chr20 49046779 49046882 -17621123 - L2 LINE L2 -34 3238 3139 530 198 10 0 chr20 49046940 49047036 -17620969 - MER97c DNA MER1_type? -975 115 19 639 267 228 19 chr20 49047080 49047440 -17620565 + L2 LINE L2 2879 3313 0 383 286 20 0 chr20 49047449 49047547 -17620458 + MIR SINE MIR 41 140 -122 357 316 0 0 chr20 49048114 49048209 -17619796 + GA-rich Low_complexity Low_complexity 1 95 0 509 257 9 0 chr20 49048445 49048558 -17619447 + MER81 DNA DNA 1 114 0 1363 237 128 22 chr20 49048576 49049023 -17618982 + MLT1D LTR MaLR 12 505 0 2419 103 102 6 chr20 49049411 49049800 -17618205 - MSTA LTR MaLR -2 426 1 332 115 19 0 chr20 49049876 49049928 -17618077 + MER74B LTR ERVL 1 53 -569 920 232 160 22 chr20 49049988 49050175 -17617830 + MER74B LTR ERVL 193 353 -269 192 77 0 0 chr20 49050175 49050201 -17617804 + (CCCTG)n Simple_repeat Simple_repeat 5 30 0 920 232 160 22 chr20 49050201 49050375 -17617630 + MER74B LTR ERVL 353 604 -18 284 333 109 42 chr20 49051058 49051415 -17616590 + HERVL74 LTR ERVL 622 1002 -4683 29 0 0 0 chr20 49051655 49051684 -17616321 + AT_rich Low_complexity Low_complexity 1 29 0 2030 138 0 3 chr20 49051776 49052081 -17615924 - AluSx SINE Alu -4 308 5 184 291 55 0 chr20 49052308 49052363 -17615642 + MIR SINE MIR 72 129 -79 972 298 58 22 chr20 49052839 49053288 -17614717 + L2 LINE L2 2847 3311 -2 262 167 26 90 chr20 49053694 49053772 -17614233 - MLT1I LTR MaLR -265 144 72 222 37 0 0 chr20 49053907 49053934 -17614071 + (GA)n Simple_repeat Simple_repeat 2 28 0 472 234 240 23 chr20 49054632 49054807 -17613198 + Charlie2 DNA MER1_type 10 222 -2560 902 232 132 48 chr20 49054811 49055165 -17612840 - LTR33 LTR ERVL -3 518 126 4158 89 9 4 chr20 49055165 49055716 -17612289 - MER41A LTR ERV1 0 554 1 902 232 132 48 chr20 49055716 49055754 -17612251 - LTR33 LTR ERVL -395 126 93 * 1524 235 210 20 chr20 49055753 49056416 -17611589 + Charlie2 DNA MER1_type 2030 2818 -44 240 86 0 0 chr20 49056749 49056784 -17611221 + (CAA)n Simple_repeat Simple_repeat 1 35 0 324 209 186 84 chr20 49056795 49057012 -17610993 - MIR SINE MIR -9 253 30 2653 171 52 42 chr20 49057113 49057679 -17610326 + MER41C LTR ERV1 2 554 0 200 262 0 49 chr20 49057685 49057746 -17610259 - L2 LINE L2 -14 3299 3242 918 260 88 62 chr20 49058138 49058538 -17609467 - MLT1J LTR MaLR 0 511 102 1867 143 17 0 chr20 49058601 49058895 -17609110 - AluJb SINE Alu -13 299 1 494 269 8 22 chr20 49059375 49059509 -17608496 - LTR67 LTR ERVL -40 517 386 718 179 26 66 chr20 49059517 49059668 -17608337 - AluJo SINE Alu -145 167 23 707 283 175 21 chr20 49060903 49061281 -17606724 - MLT1K LTR MaLR -9 579 144 2304 168 57 2 chr20 49061366 49061770 -17606235 - MSTB LTR MaLR 0 426 1 2268 143 11 6 chr20 49062351 49062715 -17605290 - MER47A DNA MER2_type 0 366 1 201 213 0 0 chr20 49062723 49062770 -17605235 + (TATATG)n Simple_repeat Simple_repeat 1 47 0 625 269 6 19 chr20 49062979 49063139 -17604866 - MIR SINE MIR -40 222 65 584 301 64 40 chr20 49063140 49063469 -17604536 + MLT1I LTR MaLR 51 387 -22 2165 157 49 40 chr20 49063631 49064059 -17603946 - MSTB1 LTR MaLR 0 432 1 450 251 27 44 chr20 49064297 49064500 -17603505 - MIR SINE MIR -4 258 1 354 318 56 37 chr20 49064594 49064808 -17603197 - MIR SINE MIR -40 222 5 356 203 16 81 chr20 49064856 49064979 -17603026 + Charlie8 DNA MER1_type 92 206 -2211 215 152 22 0 chr20 49065732 49065778 -17602227 + CT-rich Low_complexity Low_complexity 3 49 0 693 297 103 51 chr20 49065795 49066223 -17601782 - L2 LINE L2 -13 3300 2851 2007 103 3 7 chr20 49066469 49066781 -17601224 + AluSx SINE Alu 1 311 0 292 298 128 72 chr20 49066821 49067126 -17600879 - L2 LINE L2 -4 3268 2947 564 213 27 37 chr20 49067140 49067301 -17600704 + MIR SINE MIR 99 256 -6 270 241 145 24 chr20 49067557 49067640 -17600365 + MIR SINE MIR 63 155 -107 1740 202 63 59 chr20 49067701 49068196 -17599809 + MLT1D LTR MaLR 1 497 -8 207 294 33 43 chr20 49068231 49068323 -17599682 + L2 LINE L2 3173 3263 -9 204 282 141 0 chr20 49068936 49069007 -17598998 - MIR SINE MIR -73 189 109 467 221 59 52 chr20 49069007 49069143 -17598862 - L2 LINE L2 -1 3312 3176 417 248 187 57 chr20 49071032 49071294 -17596711 + Charlie2 DNA MER1_type 45 340 -2442 380 237 59 35 chr20 49071314 49071483 -17596522 + Charlie2 DNA MER1_type 2232 2404 -458 435 38 0 0 chr20 49071500 49071553 -17596452 + (TG)n Simple_repeat Simple_repeat 2 54 0 1956 134 46 0 chr20 49071562 49071868 -17596137 - MER2 DNA MER2_type -25 320 1 273 57 0 0 chr20 49071868 49071903 -17596102 + (CA)n Simple_repeat Simple_repeat 1 35 0 291 71 0 0 chr20 49071903 49071945 -17596060 + (TC)n Simple_repeat Simple_repeat 1 42 0 378 0 0 0 chr20 49072273 49072315 -17595690 + (T)n Simple_repeat Simple_repeat 1 42 0 674 267 132 30 chr20 49072577 49072948 -17595057 + MLT1I LTR MaLR 1 409 0 456 254 30 61 chr20 49074223 49074420 -17593585 - MLT1K LTR MaLR -3 585 395 1577 284 92 27 chr20 49076141 49076697 -17591308 - MLT1E LTR MaLR -1 592 1 524 281 67 72 chr20 49077741 49078129 -17589876 + MLT1I LTR MaLR 22 407 -2 2362 79 3 0 chr20 49078195 49078485 -17589520 + AluSx SINE Alu 6 296 -16 256 165 0 118 chr20 49079292 49079377 -17588628 - MLT1G1 LTR MaLR -17 578 504 227 224 0 0 chr20 49079534 49079583 -17588422 - MLT1I LTR MaLR -263 146 98 394 254 41 16 chr20 49080287 49080409 -17587596 + MIR SINE MIR 19 143 -65 1080 247 29 4 chr20 49080434 49080677 -17587328 + MIR SINE MIR 14 262 0 447 272 25 86 chr20 49080771 49081014 -17586991 - MIR SINE MIR -8 254 27 274 149 21 0 chr20 49081084 49081131 -17586874 - L2 LINE L2 -1 3312 3265 740 126 26 0 chr20 49081152 49081303 -17586702 + (TCCA)n Simple_repeat Simple_repeat 4 158 0 347 329 74 26 chr20 49082554 49082864 -17585141 + MLT1J LTR MaLR 27 351 -160 22 35 0 0 chr20 49083215 49083244 -17584761 + AT_rich Low_complexity Low_complexity 1 29 0 180 255 21 0 chr20 49083364 49083411 -17584594 - MIR3 SINE MIR -2 206 159 2396 70 0 10 chr20 49083729 49084027 -17583978 + AluY SINE Alu 1 295 -16 369 272 0 53 chr20 49084104 49084218 -17583787 + MER94 DNA DNA 6 113 -21 318 262 48 10 chr20 49084336 49084439 -17583566 + MER94 DNA DNA 1 107 -27 325 241 41 53 chr20 49084756 49084926 -17583079 - L1MC4a LINE L1 -1763 6045 5878 800 218 6 6 chr20 49084972 49085128 -17582877 + FRAM SINE Alu 1 156 -20 804 301 51 15 chr20 49085219 49085551 -17582454 - L1MC4a LINE L1 -2039 5769 5426 1865 119 45 35 chr20 49085827 49086113 -17581892 - AluJb SINE Alu -23 289 1 2366 92 10 3 chr20 49086114 49086418 -17581587 - AluSx SINE Alu -6 306 1 207 88 0 0 chr20 49086942 49086976 -17581029 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 1180 254 146 31 chr20 49087192 49088028 -17579977 + L2 LINE L2 2376 3313 0 193 265 135 40 chr20 49088630 49088792 -17579213 + MIR SINE MIR 15 143 -65 239 273 57 0 chr20 49088917 49089005 -17579000 - MIR SINE MIR -90 172 80 3798 141 55 91 chr20 49089405 49090219 -17577786 - LTR1 LTR ERV1 0 785 1 2108 117 19 13 chr20 49090971 49091278 -17576727 + AluSc SINE Alu 1 309 0 313 301 18 49 chr20 49091357 49091520 -17576485 - L1MC4a LINE L1 -1917 5891 5734 938 284 56 28 chr20 49091522 49091916 -17576089 + MLT1I LTR MaLR 5 409 0 479 286 84 14 chr20 49093393 49093606 -17574399 + MLT1K LTR MaLR 30 257 -331 422 309 146 0 chr20 49094116 49094294 -17573711 + MLT1K LTR MaLR 323 526 -62 2226 85 0 0 chr20 49094323 49094593 -17573412 - AluSx SINE Alu -8 304 35 370 264 194 19 chr20 49094725 49094983 -17573022 + L1MC/D LINE L1 5292 5594 -2214 278 248 176 20 chr20 49095008 49095161 -17572844 - LTR33A LTR ERVL 0 523 347 2569 264 54 9 chr20 49095318 49096568 -17571437 + L1MDa LINE L1 17 1482 -5058 1000 298 143 25 chr20 49096564 49096676 -17571329 - HAL1 LINE L1 -43 2464 2367 * 2240 111 0 0 chr20 49096676 49097004 -17571001 - AluSc SINE Alu 0 309 1 1000 298 143 25 chr20 49097004 49097865 -17570140 - HAL1 LINE L1 -140 2367 1376 277 277 161 9 chr20 49098937 49099049 -17568956 - MER5B DNA MER1_type -29 149 21 246 309 151 16 chr20 49098942 49099068 -17568937 + MER5A DNA MER1_type 46 188 -1 * 192 77 0 0 chr20 49099096 49099122 -17568883 + (T)n Simple_repeat Simple_repeat 1 26 0 1142 61 0 0 chr20 49099122 49099254 -17568751 - AluY SINE Alu -179 132 1 449 301 139 41 chr20 49099301 49099502 -17568503 - L1MEc LINE L1 -4106 3032 2852 2027 147 10 0 chr20 49099502 49099795 -17568210 - AluSx SINE Alu -16 296 1 449 301 139 41 chr20 49099795 49100544 -17567461 - L1MEc LINE L1 -4286 2852 1932 2506 55 0 16 chr20 49100544 49100853 -17567152 - AluY SINE Alu -7 304 1 449 301 139 41 chr20 49100853 49101132 -17566873 - L1MEc LINE L1 -5206 1932 1682 306 296 69 58 chr20 49101163 49101352 -17566653 - L1MEc LINE L1 -5409 1450 1260 815 270 29 0 chr20 49102264 49102468 -17565537 + MIR SINE MIR 8 217 -45 241 328 34 50 chr20 49102585 49102704 -17565301 - MIR3 SINE MIR -50 158 42 210 287 42 60 chr20 49103268 49103435 -17564570 + L2 LINE L2 2364 2527 -787 395 278 128 4 chr20 49103469 49103810 -17564195 + L2 LINE L2 2768 3147 -166 269 232 14 0 chr20 49103922 49103991 -17564014 - L2 LINE L2 -39 3274 3205 325 210 153 32 chr20 49104269 49104393 -17563612 - MIR SINE MIR -40 222 84 1163 265 72 25 chr20 49105002 49105448 -17562557 + MLT1C LTR MaLR 1 467 0 374 284 17 17 chr20 49105897 49106013 -17561992 + MIR3 SINE MIR 85 200 -8 727 300 104 19 chr20 49106063 49106908 -17561097 - L2 LINE L2 0 3313 2392 548 144 0 19 chr20 49107488 49107592 -17560413 + (GGGA)n Simple_repeat Simple_repeat 3 104 0 384 22 0 0 chr20 49108872 49108917 -17559088 + (TG)n Simple_repeat Simple_repeat 2 46 0 708 288 101 40 chr20 49109746 49110073 -17557932 - MLT1K LTR MaLR 0 588 242 320 245 43 0 chr20 49110298 49110392 -17557613 - MLT1K LTR MaLR -492 98 1 * 358 245 80 49 chr20 49110392 49110550 -17557455 + LTR16C LTR ERVL 329 491 0 1729 186 10 22 chr20 49111252 49111564 -17556441 - AluJo SINE Alu -3 309 2 328 288 68 92 chr20 49111767 49112017 -17555988 - MIR SINE MIR -4 258 15 246 106 0 85 chr20 49112045 49112092 -17555913 + MER53 DNA DNA 1 43 -146 538 226 32 0 chr20 49112434 49112589 -17555416 + MER113 DNA MER1_type? 46 205 -316 2630 118 13 5 chr20 49112589 49112961 -17555044 + THE1C LTR MaLR 1 375 0 2426 101 0 13 chr20 49113000 49113317 -17554688 + AluSq SINE Alu 1 313 0 21 36 0 0 chr20 49113434 49113462 -17554543 + AT_rich Low_complexity Low_complexity 1 28 0 250 281 45 34 chr20 49114128 49114217 -17553788 + MLT1G1 LTR MaLR 487 576 -19 5445 144 16 0 chr20 49115265 49116170 -17551835 + L1PA11 LINE L1 5254 6172 -2 2658 75 5 48 chr20 49116196 49116467 -17551538 + L1PB2 LINE L1 5767 6017 -134 2251 117 3 0 chr20 49116467 49116774 -17551231 + AluSg SINE Alu 3 310 0 2658 75 5 48 chr20 49116774 49116902 -17551103 + L1PB2 LINE L1 6017 6149 -2 31 0 0 0 chr20 49116902 49116933 -17551072 + AT_rich Low_complexity Low_complexity 1 31 0 278 238 29 38 chr20 49118143 49118248 -17549757 + LTR33 LTR ERVL 44 147 -374 557 289 32 0 chr20 49118798 49118988 -17549017 + MIR SINE MIR 53 248 -14 2259 126 20 12 chr20 49119100 49119441 -17548564 - MER2 DNA MER2_type 0 344 1 339 333 148 29 chr20 49119680 49120775 -17547230 + L2 LINE L2 2035 3271 -1 267 311 58 39 chr20 49122048 49122305 -17545700 - LTR16C LTR ERVL -92 399 138 244 319 100 44 chr20 49122523 49122683 -17545322 + L2 LINE L2 2957 3125 -147 323 270 28 77 chr20 49122988 49123212 -17544793 + MLT1L LTR MaLR 111 407 -193 273 250 11 68 chr20 49123408 49123496 -17544509 - MIR3 SINE MIR -1 207 125 460 280 72 32 chr20 49123646 49123896 -17544109 - MIR SINE MIR -1 261 2 308 303 25 66 chr20 49124108 49124306 -17543699 - MER102a DNA MER1_type -25 305 116 2007 185 23 45 chr20 49124377 49124505 -17543500 - L1MB8 LINE L1 -5 6671 6542 796 203 0 0 chr20 49124505 49124638 -17543367 - FLAM_A SINE Alu 0 133 1 2007 185 23 45 chr20 49124638 49124686 -17543319 - L1MB8 LINE L1 -134 6542 6494 2185 102 20 3 chr20 49124686 49124989 -17543016 + AluSg SINE Alu 3 310 0 2007 185 23 45 chr20 49124989 49125754 -17542251 - L1MB8 LINE L1 -182 6494 5824 5738 226 66 23 chr20 49125790 49127417 -17540588 - L1MB8 LINE L1 -4839 1703 8 230 314 12 12 chr20 49127458 49127544 -17540461 - MER102a DNA MER1_type -241 89 4 261 242 58 50 chr20 49127596 49127716 -17540289 - MIR3 SINE MIR -7 201 81 1270 256 48 5 chr20 49127906 49128304 -17539701 + L1ME3A LINE L1 5751 6165 -5 22 0 0 0 chr20 49129436 49129458 -17538547 + AT_rich Low_complexity Low_complexity 1 22 0 286 351 9 0 chr20 49129564 49129675 -17538330 - L3 LINE CR1 -20 1557 1446 1873 167 0 46 chr20 49129975 49130298 -17537707 - AluJo SINE Alu -4 308 1 374 235 25 53 chr20 49130298 49130493 -17537512 - MLT1K LTR MaLR -294 294 144 322 379 0 0 chr20 49130805 49130979 -17537026 + (CA)n Simple_repeat Simple_repeat 2 175 0 213 245 38 0 chr20 49131991 49132044 -17535961 - L2 LINE L2 -6 3307 3253 203 352 56 19 chr20 49132089 49132197 -17535808 - L2 LINE L2 -14 3258 3147 342 281 150 12 chr20 49132384 49132551 -17535454 + MIR SINE MIR 22 211 -51 651 223 161 31 chr20 49132687 49133022 -17534983 - MER57A LTR ERV1 0 403 67 974 206 38 0 chr20 49133410 49133619 -17534386 + MER20 DNA MER1_type 3 219 0 194 313 113 25 chr20 49133644 49133804 -17534201 - L2 LINE L2 -228 3044 2871 235 197 49 148 chr20 49134091 49134213 -17533792 + LTR67 LTR ERVL 426 535 -22 240 86 0 0 chr20 49134348 49134383 -17533622 + (CA)n Simple_repeat Simple_repeat 2 36 0 2662 68 0 0 chr20 49134441 49134751 -17533254 - AluY SINE Alu -1 310 1 690 242 94 69 chr20 49134752 49135115 -17532890 + MLT1L LTR MaLR 34 405 -210 550 248 176 7 chr20 49135235 49135388 -17532617 - MER5A DNA MER1_type -2 187 9 347 113 0 0 chr20 49135399 49135452 -17532553 + MLT1L LTR MaLR 557 609 -6 522 297 0 7 chr20 49136074 49136219 -17531786 + MIR3 SINE MIR 65 208 0 594 261 34 23 chr20 49136243 49136419 -17531586 - MER5B DNA MER1_type 0 178 1 180 129 32 0 chr20 49136426 49136457 -17531548 - MIR SINE MIR -62 146 115 250 272 102 7 chr20 49137462 49137609 -17530396 - LTR16C LTR ERVL -176 315 155 518 274 46 0 chr20 49137802 49137977 -17530028 - MER5A DNA MER1_type -2 187 5 561 241 226 33 chr20 49138056 49138369 -17529636 + L2 LINE L2 2827 3235 -78 239 0 32 0 chr20 49138369 49138400 -17529605 + (CGGGGG)n Simple_repeat Simple_repeat 3 34 0 561 241 226 33 chr20 49138400 49138484 -17529521 + L2 LINE L2 3235 3301 -12 2619 58 0 6 chr20 49139278 49139591 -17528414 + AluY SINE Alu 1 311 0 1400 95 85 9 chr20 49139705 49139916 -17528089 - AluSp SINE Alu -3 310 84 311 303 9 0 chr20 49139922 49140031 -17527974 - L1ME4a LINE L1 -264 5857 5748 215 31 31 0 chr20 49140036 49140068 -17527937 + (TTTTG)n Simple_repeat Simple_repeat 4 36 0 1280 161 0 10 chr20 49140158 49140357 -17527648 - AluJo SINE Alu -24 288 92 2385 90 3 3 chr20 49140563 49140874 -17527131 - AluY SINE Alu 0 311 1 1916 148 3 0 chr20 49141356 49141671 -17526334 - AluJb SINE Alu 0 316 1 2199 104 10 0 chr20 49141815 49142104 -17525901 + AluSc SINE Alu 1 292 -17 643 274 26 52 chr20 49142293 49142603 -17525402 - MLT1K LTR MaLR -1 587 286 261 250 15 0 chr20 49143398 49143466 -17524539 + (TGAG)n Simple_repeat Simple_repeat 4 72 0 295 297 40 0 chr20 49143776 49143877 -17524128 + MIR SINE MIR 78 182 -80 279 118 98 99 chr20 49144577 49144688 -17523317 - MLT1I LTR MaLR 0 549 285 297 295 13 40 chr20 49144873 49145022 -17522983 - MLT1H LTR MaLR -374 175 31 247 350 7 56 chr20 49145120 49145263 -17522742 + MIR SINE MIR 93 228 -34 302 281 206 25 chr20 49145443 49145642 -17522363 + MIR SINE MIR 9 243 -19 280 253 120 44 chr20 49145648 49145806 -17522199 + MIR3 SINE MIR 19 188 -20 489 211 11 0 chr20 49147783 49147873 -17520132 + MER20 DNA MER1_type 1 91 -128 964 218 128 25 chr20 49148372 49148785 -17519220 + LTR48 LTR ERV1 1 481 -306 603 216 53 53 chr20 49148819 49148990 -17519015 + LTR48 LTR ERV1 617 787 0 699 252 16 52 chr20 49149115 49149365 -17518640 - MER112 DNA MER1_type -12 248 8 424 282 33 37 chr20 49149381 49149626 -17518379 + HAL1 LINE L1 1971 2214 -293 366 219 133 0 chr20 49151945 49152050 -17515955 + MIR SINE MIR 84 202 -60 564 249 95 27 chr20 49153960 49154181 -17513824 - MER106A DNA MER1_type 0 236 1 1092 254 42 40 chr20 49154238 49154711 -17513294 - L2 LINE L2 -338 2976 2503 469 233 161 28 chr20 49154759 49154939 -17513066 - MIR SINE MIR -56 206 3 25 31 0 0 chr20 49155248 49155280 -17512725 + AT_rich Low_complexity Low_complexity 1 32 0 2871 191 59 11 chr20 49155788 49156399 -17511606 + MER82 DNA MER2_type 14 653 0 2305 145 11 45 chr20 49156597 49156989 -17511016 + MSTB LTR MaLR 1 378 -48 523 101 13 0 chr20 49156989 49157068 -17510937 - MADE1 DNA Mariner 0 80 1 2305 145 11 45 chr20 49157068 49157116 -17510889 + MSTB LTR MaLR 378 426 0 299 247 171 0 chr20 49157412 49157570 -17510435 - MER112 DNA MER1_type -19 241 57 1790 223 65 28 chr20 49157574 49158012 -17509993 + MLT2B1 LTR ERVL 1 458 -62 195 42 0 0 chr20 49158012 49158036 -17509969 + (TC)n Simple_repeat Simple_repeat 1 24 0 1790 223 65 28 chr20 49158036 49158060 -17509945 + MLT2B1 LTR ERVL 458 480 -40 219 204 0 0 chr20 49158060 49158109 -17509896 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 594 306 80 46 chr20 49159818 49160367 -17507638 - L2 LINE L2 -15 3298 2727 1611 260 92 10 chr20 49160415 49161253 -17506752 - L2 LINE L2 -5 3308 2384 372 268 9 43 chr20 49161800 49162078 -17505927 - MER112 DNA MER1_type -27 233 3 602 121 36 21 chr20 49163722 49164147 -17503858 + (TG)n Simple_repeat Simple_repeat 1 431 0 635 212 216 23 chr20 49164213 49164419 -17503586 + MIR SINE MIR 6 227 -35 276 348 77 9 chr20 49164674 49165010 -17502995 + L1MC4a LINE L1 5560 5918 -1890 383 300 0 0 chr20 49165010 49165130 -17502875 + (CA)n Simple_repeat Simple_repeat 1 120 0 290 259 168 54 chr20 49165248 49165545 -17502460 + L2 LINE L2 2810 3140 -173 250 171 0 0 chr20 49165589 49165630 -17502375 + L2 LINE L2 3269 3309 -4 23 0 0 0 chr20 49165821 49165844 -17502161 + AT_rich Low_complexity Low_complexity 1 23 0 350 243 68 34 chr20 49166221 49166369 -17501636 + MLT1K LTR MaLR 95 247 -341 287 306 37 19 chr20 49166794 49166902 -17501103 - MIR3 SINE MIR -21 187 78 22 0 0 0 chr20 49167532 49167554 -17500451 + AT_rich Low_complexity Low_complexity 1 22 0 297 286 10 76 chr20 49168123 49168229 -17499776 + MIR SINE MIR 9 106 -102 524 272 154 6 chr20 49168366 49168528 -17499477 + MER5A DNA MER1_type 4 189 0 1074 200 9 9 chr20 49168607 49168827 -17499178 + MLT2B1 LTR ERVL 1 220 -300 1708 190 0 29 chr20 49168828 49169139 -17498866 + AluJo SINE Alu 1 302 -10 263 91 0 23 chr20 49169146 49169190 -17498815 + (GGAA)n Simple_repeat Simple_repeat 4 46 0 657 167 0 43 chr20 49169190 49169376 -17498629 + GA-rich Low_complexity Low_complexity 1 178 0 567 203 95 27 chr20 49169428 49169576 -17498429 + MLT2B1 LTR ERVL 333 490 -30 313 268 84 56 chr20 49169649 49169689 -17498316 - L1ME LINE L1 -299 5822 5785 2089 183 89 9 chr20 49169689 49170116 -17497889 - LOR1b LTR ERV1 0 461 1 313 268 84 56 chr20 49170116 49170217 -17497788 - L1ME LINE L1 -336 5785 5677 227 275 14 0 chr20 49170223 49170292 -17497713 + A-rich Low_complexity Low_complexity 1 70 0 2132 78 53 9 chr20 49170331 49170652 -17497353 - LOR1a LTR ERV1 -160 337 3 680 246 156 63 chr20 49171888 49172306 -17495699 + MLT1D LTR MaLR 5 467 0 831 302 69 33 chr20 49172628 49173254 -17494751 - L2 LINE L2 -19 3294 2632 265 298 149 0 chr20 49173265 49173406 -17494599 + MIR SINE MIR 72 233 -29 3704 95 16 2 chr20 49173825 49174331 -17493674 + LTR10D LTR ERV1 1 513 0 372 270 43 86 chr20 49174608 49174843 -17493162 + L1MC5 LINE L1 7508 7885 -110 244 271 107 16 chr20 49174849 49174971 -17493034 + L1MC5 LINE L1 7752 7884 -77 2250 207 50 40 chr20 49176446 49177093 -17490912 - MER52C LTR ERV1 -622 656 19 232 154 0 0 chr20 49177093 49177132 -17490873 + MER52A LTR ERV1 1 39 -1716 834 153 64 6 chr20 49177518 49177675 -17490330 + MLT2D LTR ERVL 201 366 -48 250 185 0 0 chr20 49177711 49177765 -17490240 + MLT2D LTR ERVL 465 518 -2 361 296 22 0 chr20 49178068 49178203 -17489802 - LTR33 LTR ERVL -65 456 319 273 237 72 46 chr20 49178260 49178412 -17489593 - LTR33 LTR ERVL -311 210 55 240 232 58 0 chr20 49179588 49179657 -17488348 - MER116 DNA Mariner 0 80 8 441 336 23 0 chr20 49179701 49179832 -17488173 - L2 LINE L2 0 3272 3139 346 306 38 54 chr20 49180221 49180407 -17487598 + HAL1 LINE L1 2226 2408 -99 2345 119 0 0 chr20 49180470 49180782 -17487223 - AluSx SINE Alu 0 312 1 205 292 97 0 chr20 49181022 49181094 -17486911 - L2 LINE L2 -6 3266 3188 523 211 93 6 chr20 49181194 49181355 -17486650 - L3 LINE CR1 -64 1513 1339 367 296 115 7 chr20 49182446 49182716 -17485289 - MLT1J LTR MaLR -126 385 87 565 287 55 0 chr20 49183209 49183373 -17484632 + MIR SINE MIR 83 255 -7 210 348 43 37 chr20 49183564 49183728 -17484277 - MIR SINE MIR -48 214 50 331 312 137 44 chr20 49183775 49184163 -17483842 - L2 LINE L2 -39 3274 2851 1573 248 128 38 chr20 49185706 49186364 -17481641 - MER20B DNA MER1_type -2 781 65 263 288 13 97 chr20 49187263 49187489 -17480516 - L1ME LINE L1 -317 5804 5598 601 292 16 16 chr20 49187703 49187888 -17480117 + MIR3 SINE MIR 21 205 -3 1217 273 55 35 chr20 49188002 49188755 -17479250 + L2 LINE L2 2467 3309 -4 355 263 71 85 chr20 49188917 49189141 -17478864 - LTR67 LTR ERVL -2 555 335 227 157 20 0 chr20 49189441 49189492 -17478513 + GA-rich Low_complexity Low_complexity 1 52 0 1233 247 81 34 chr20 49189493 49189939 -17478066 - MLT2B1 LTR ERVL -48 472 6 189 0 0 0 chr20 49189974 49189995 -17478010 + (A)n Simple_repeat Simple_repeat 1 21 0 1146 194 152 77 chr20 49190194 49190648 -17477357 + MER41B LTR ERV1 114 601 -34 249 159 0 0 chr20 49190700 49190744 -17477261 + CT-rich Low_complexity Low_complexity 3 46 0 557 209 0 7 chr20 49190773 49190912 -17477093 + CT-rich Low_complexity Low_complexity 2 139 0 207 0 0 0 chr20 49190950 49190973 -17477032 + (TTCC)n Simple_repeat Simple_repeat 2 24 0 301 247 113 0 chr20 49191045 49191142 -17476863 - L2 LINE L2 -1 3312 3205 618 116 265 54 chr20 49191272 49191370 -17476635 + LTR16C LTR ERVL 306 382 -109 353 79 270 0 chr20 49191370 49191433 -17476572 - MADE1 DNA Mariner 0 80 1 618 116 265 54 chr20 49191433 49191481 -17476524 + LTR16C LTR ERVL 382 483 -8 272 279 177 32 chr20 49191527 49191685 -17476320 - L2 LINE L2 -228 3085 2905 543 309 101 11 chr20 49191748 49191936 -17476069 - MIR SINE MIR 0 262 58 1006 263 36 8 chr20 49192059 49192310 -17475695 - MIR SINE MIR 0 262 5 243 312 28 28 chr20 49192366 49192475 -17475530 - MIR SINE MIR -128 134 26 432 269 57 21 chr20 49192673 49192814 -17475191 + MIR SINE MIR 116 261 -1 596 272 163 33 chr20 49193405 49193835 -17474170 + L2 LINE L2 2827 3312 -1 1782 186 7 13 chr20 49194516 49194823 -17473182 - AluJb SINE Alu -7 305 1 334 259 148 12 chr20 49195195 49195357 -17472648 - L2 LINE L2 -133 3180 2997 372 256 67 0 chr20 49195371 49195461 -17472544 - MER81 DNA DNA -1 113 18 927 282 80 19 chr20 49195717 49195765 -17472240 - L1ME1 LINE L1 -64 6102 6058 2105 144 0 0 chr20 49195765 49196064 -17471941 - AluSx SINE Alu -13 299 1 927 282 80 19 chr20 49196064 49196437 -17471568 - L1ME1 LINE L1 -108 6058 5720 418 78 37 1 chr20 49196737 49196832 -17471173 - L1ME1 LINE L1 -793 5368 5289 * 2909 82 5 23 chr20 49196829 49197280 -17470725 + L1PA13 LINE L1 5720 6162 0 1771 147 52 33 chr20 49197941 49198247 -17469758 - AluJo SINE Alu 0 312 1 351 230 234 40 chr20 49198277 49198499 -17469506 + MER20B DNA MER1_type 26 290 -493 538 262 48 5 chr20 49198753 49198940 -17469065 + MER20B DNA MER1_type 589 783 0 759 260 113 35 chr20 49199273 49199706 -17468299 + MLT1J LTR MaLR 4 470 -41 264 240 115 10 chr20 49199706 49199802 -17468203 + MLT1J2 LTR MaLR 1 106 -344 427 229 98 89 chr20 49199849 49200063 -17467942 + MLT1J2 LTR MaLR 231 450 0 746 194 63 118 chr20 49200893 49201071 -17466934 + MER58A DNA MER1_type 1 164 -2256 1933 148 7 10 chr20 49201071 49201362 -17466643 - AluSx SINE Alu -22 290 1 746 194 63 118 chr20 49201362 49201420 -17466585 + MER58A DNA MER1_type 164 224 0 324 345 94 21 chr20 49201609 49201800 -17466205 - HAL1 LINE L1 -29 2478 2274 447 327 65 23 chr20 49201875 49202092 -17465913 + MIR SINE MIR 31 256 -6 1649 204 3 3 chr20 49202134 49202428 -17465577 - AluJo SINE Alu -18 294 1 750 271 168 25 chr20 49202573 49203065 -17464940 + L2 LINE L2 2411 2832 -481 2223 106 0 3 chr20 49203065 49203474 -17464531 + AluSg SINE Alu 1 408 0 750 271 168 25 chr20 49203474 49203766 -17464239 + L2 LINE L2 2832 3312 -1 319 218 109 0 chr20 49204886 49204987 -17463018 + MER112 DNA MER1_type 137 248 -12 2446 97 0 0 chr20 49205219 49205529 -17462476 - AluSx SINE Alu -2 310 1 1226 179 44 37 chr20 49205567 49205864 -17462141 + MER33 DNA MER1_type 3 301 -23 538 211 151 77 chr20 49205927 49206226 -17461779 + L1MC5 LINE L1 7609 7929 -32 580 233 16 45 chr20 49206315 49206479 -17461526 + MIR SINE MIR 2 161 -51 1497 236 134 9 chr20 49206501 49206606 -17461399 - MLT1D LTR MaLR -8 497 406 3616 118 11 4 chr20 49206606 49207129 -17460876 - MER1A DNA MER1_type 0 527 1 1497 236 134 9 chr20 49207129 49207463 -17460542 - MLT1D LTR MaLR -98 407 3 222 296 114 11 chr20 49207463 49207551 -17460454 + MIR SINE MIR 164 260 -2 667 259 22 58 chr20 49207710 49207984 -17460021 + MLT1J LTR MaLR 239 502 -9 766 238 7 7 chr20 49208630 49208777 -17459228 + FRAM SINE Alu 7 153 -23 314 330 0 0 chr20 49208814 49208914 -17459091 + MLT1K LTR MaLR 185 284 -304 426 237 76 0 chr20 49209190 49209308 -17458697 - LTR16C LTR ERVL -15 476 350 420 277 69 0 chr20 49210093 49210252 -17457753 - LTR16C LTR ERVL -252 239 70 3480 73 60 24 chr20 49210346 49210951 -17457054 - MER41A LTR ERV1 0 554 1 3725 168 100 40 chr20 49211239 49212090 -17455915 + MER4D LTR ERV1 1 902 -1 2253 125 0 0 chr20 49212416 49212713 -17455292 - AluSq SINE Alu -16 297 1 323 303 0 49 chr20 49212751 49212873 -17455132 - L2 LINE L2 0 3313 3198 226 333 0 0 chr20 49212843 49212900 -17455105 - MIR SINE MIR 0 262 206 * 287 314 0 9 chr20 49213401 49213506 -17454499 + MLT1L LTR MaLR 410 513 -102 236 125 94 31 chr20 49213998 49214062 -17453943 - L1MC2 LINE L1 0 6344 6277 1583 202 0 28 chr20 49214243 49214560 -17453445 - AluJo SINE Alu -4 308 1 1981 167 0 3 chr20 49215965 49216264 -17451741 - AluJo SINE Alu -14 298 1 782 200 109 106 chr20 49216378 49216718 -17451287 - MLT1D LTR MaLR -149 356 16 2110 119 3 7 chr20 49216847 49217135 -17450870 + AluSx SINE Alu 1 289 -23 216 0 0 0 chr20 49217135 49217159 -17450846 + (TTAA)n Simple_repeat Simple_repeat 3 26 0 210 338 81 0 chr20 49217928 49218064 -17449941 + L2 LINE L2 2937 3083 -189 618 284 159 66 chr20 49218291 49218366 -17449639 - MLT1K LTR MaLR -25 563 496 2008 122 50 4 chr20 49218366 49218644 -17449361 + AluSg SINE Alu 1 291 -19 618 284 159 66 chr20 49218644 49219083 -17448922 - MLT1K LTR MaLR -92 496 1 2537 115 0 3 chr20 49219136 49219474 -17448531 + MER1B DNA MER1_type 1 337 0 182 306 28 28 chr20 49220233 49220305 -17447700 + L2 LINE L2 3188 3259 -54 2246 170 6 0 chr20 49220307 49220665 -17447340 - MLT1A1 LTR MaLR -2 363 4 296 246 0 15 chr20 49220683 49220748 -17447257 + L2 LINE L2 3250 3313 0 688 245 5 46 chr20 49220875 49221023 -17446982 - MER20 DNA MER1_type 0 219 79 342 0 0 0 chr20 49221023 49221061 -17446944 + (CA)n Simple_repeat Simple_repeat 1 38 0 688 245 5 46 chr20 49221061 49221108 -17446897 - MER20 DNA MER1_type -140 79 32 238 343 67 59 chr20 49221275 49221514 -17446491 - L2 LINE L2 -1 3271 3031 * 250 265 88 10 chr20 49221500 49221602 -17446403 + L2 LINE L2 3202 3311 -2 626 282 54 21 chr20 49221957 49222198 -17445807 - MIR SINE MIR 0 262 14 691 231 8 22 chr20 49222271 49222425 -17445580 + FLAM_A SINE Alu 1 133 0 656 294 108 45 chr20 49222432 49222784 -17445221 + L1MDa LINE L1 1260 1700 -4881 1961 171 7 0 chr20 49222784 49223094 -17444911 + AluSx SINE Alu 1 312 0 656 294 108 45 chr20 49223094 49223279 -17444726 + L1MDa LINE L1 1700 1872 -4709 1972 157 0 10 chr20 49223478 49223783 -17444222 + AluSx SINE Alu 1 302 -10 416 199 85 64 chr20 49224117 49224258 -17443747 + LTR45 LTR ERV1 346 514 0 938 270 58 56 chr20 49224258 49224340 -17443665 + L1MDa LINE L1 1892 1972 -4749 2351 97 3 25 chr20 49224340 49224660 -17443345 + AluSp SINE Alu 1 313 0 938 270 58 56 chr20 49224660 49225059 -17442946 + L1MDa LINE L1 1972 2374 -4347 398 223 114 99 chr20 49225065 49225267 -17442738 + L1MDa LINE L1 2441 2645 -3895 681 255 130 43 chr20 49225267 49225589 -17442416 + L1ME3 LINE L1 5806 6155 -7 555 292 55 32 chr20 49225730 49226059 -17441946 - LTR16A LTR ERVL -106 344 1 379 318 50 11 chr20 49226059 49226238 -17441767 + L2 LINE L2 2574 2759 -555 2227 107 16 10 chr20 49226258 49226566 -17441439 - AluSx SINE Alu -2 310 1 337 127 18 0 chr20 49226654 49226709 -17441296 - MER81 DNA DNA -1 113 58 414 310 13 39 chr20 49227212 49227379 -17440626 - MER20B DNA MER1_type 0 219 54 238 340 58 0 chr20 49227654 49227757 -17440248 - L2 LINE L2 -7 3265 3157 408 323 32 28 chr20 49227829 49227953 -17440052 - MER112 DNA MER1_type -6 254 132 950 50 22 50 chr20 49227953 49228135 -17439870 + (GGATG)n Simple_repeat Simple_repeat 2 178 0 408 323 32 28 chr20 49228135 49228261 -17439744 - MER112 DNA MER1_type -128 132 3 241 366 20 46 chr20 49228402 49228555 -17439450 - MIR SINE MIR -50 212 64 2374 58 6 13 chr20 49228754 49229067 -17438938 - AluY SINE Alu 0 311 1 309 245 118 0 chr20 49229284 49229386 -17438619 - L2 LINE L2 -6 3307 3194 347 304 9 18 chr20 49229834 49229946 -17438059 - MIR SINE MIR -137 125 15 2031 108 88 51 chr20 49229984 49230335 -17437670 - THE1B LTR MaLR 0 364 1 407 279 180 17 chr20 49230680 49230852 -17437153 - MIR SINE MIR -49 213 14 391 330 121 21 chr20 49230993 49231323 -17436682 + L2 LINE L2 2945 3307 -6 443 215 122 0 chr20 49231483 49231590 -17436415 + MIR SINE MIR 70 189 -73 252 59 0 0 chr20 49234944 49234978 -17433027 + (CA)n Simple_repeat Simple_repeat 2 35 0 221 264 0 7 chr20 49235252 49235407 -17432598 + (TG)n Simple_repeat Simple_repeat 1 154 0 372 273 0 0 chr20 49235475 49235640 -17432365 + (TG)n Simple_repeat Simple_repeat 2 166 0 185 243 14 0 chr20 49235657 49235727 -17432278 + (TG)n Simple_repeat Simple_repeat 2 72 0 604 217 16 0 chr20 49236298 49236427 -17431578 - LTR16C LTR ERVL -4 487 357 365 290 184 14 chr20 49236541 49236834 -17431171 - LTR16C LTR ERVL -148 343 1 199 330 50 34 chr20 49236989 49237168 -17430837 - L2 LINE L2 -24 3289 3108 604 261 29 57 chr20 49237424 49237669 -17430336 + MER112 DNA MER1_type 13 250 -10 646 226 167 31 chr20 49238293 49238648 -17429357 - L2 LINE L2 -215 3098 2713 1227 246 77 27 chr20 49238648 49238909 -17429096 + MER113 DNA MER1_type? 23 316 -205 2867 185 72 50 chr20 49238909 49239585 -17428420 - LTR8 LTR ERV1 0 691 1 1227 246 77 27 chr20 49239585 49239762 -17428243 + MER113 DNA MER1_type? 316 483 -38 2075 124 3 0 chr20 49239773 49240071 -17427934 - AluSq SINE Alu -14 299 1 610 317 113 28 chr20 49240421 49241039 -17426966 + L2 LINE L2 2613 3305 -8 277 317 34 96 chr20 49241571 49241864 -17426141 - L2 LINE L2 -4 3268 2994 193 369 29 0 chr20 49242078 49242181 -17425824 - L2 LINE L2 -609 2705 2600 2370 67 0 3 chr20 49242303 49242603 -17425402 - AluY SINE Alu -12 299 1 2093 262 72 6 chr20 49242989 49243527 -17424478 - MLT1E LTR MaLR -6 587 14 341 294 91 91 chr20 49243531 49243624 -17424381 - L1ME4a LINE L1 -59 6062 5970 879 118 0 0 chr20 49243624 49243768 -17424237 + (TGGA)n Simple_repeat Simple_repeat 1 144 0 341 294 91 91 chr20 49243768 49243983 -17424022 - L1ME4a LINE L1 -150 5971 5754 595 305 75 30 chr20 49243990 49244393 -17423612 - MLT1J LTR MaLR -6 505 39 478 251 85 7 chr20 49244428 49244597 -17423408 - L1ME4a LINE L1 -420 5701 5550 387 336 0 0 chr20 49245015 49245146 -17422859 - L2 LINE L2 -314 2999 2869 515 264 9 0 chr20 49245146 49245252 -17422753 - MER81 DNA DNA -1 113 7 394 316 0 0 chr20 49245243 49245338 -17422667 - MER81 DNA DNA -19 95 1 * 943 287 139 12 chr20 49245389 49245807 -17422198 + MLT1J LTR MaLR 39 509 -2 194 271 73 31 chr20 49246318 49246414 -17421591 - L2 LINE L2 -24 3248 3149 339 288 88 18 chr20 49247010 49247180 -17420825 + L2 LINE L2 2702 2883 -431 1982 125 3 13 chr20 49247292 49247603 -17420402 + AluSx SINE Alu 1 308 -4 2324 72 7 3 chr20 49247615 49247921 -17420084 + AluY SINE Alu 1 307 -4 450 306 127 54 chr20 49247924 49248477 -17419528 + L1ME3A LINE L1 5296 5888 -282 241 176 0 0 chr20 49248556 49248607 -17419398 + Alu SINE Alu 248 298 -4 258 234 26 71 chr20 49254073 49254220 -17413785 + MLT2D LTR ERVL 225 413 -107 243 253 18 68 chr20 49254376 49254488 -17413517 + MLT2D LTR ERVL 225 286 -128 593 236 39 69 chr20 49254576 49254927 -17413078 + MLT2D LTR ERVL 241 403 -11 564 336 98 18 chr20 49257114 49257626 -17410379 + L1ME4a LINE L1 5569 6121 0 199 281 67 0 chr20 49258232 49258321 -17409684 + L2 LINE L2 2854 2948 -324 253 310 106 53 chr20 49258350 49258689 -17409316 + L2 LINE L2 2863 3219 -94 2437 55 0 16 chr20 49259265 49259576 -17408429 + AluY SINE Alu 1 306 -5 756 201 17 6 chr20 49259642 49259816 -17408189 - MER96B DNA MER1_type? -1 416 241 376 127 13 13 chr20 49259827 49259906 -17408099 + GA-rich Low_complexity Low_complexity 3 81 0 1954 66 122 0 chr20 49260330 49260601 -17407404 - AluY SINE Alu -7 304 1 1028 180 45 18 chr20 49262332 49262554 -17405451 - AluJb SINE Alu -1 311 84 843 300 98 31 chr20 49262608 49263065 -17404940 + L2 LINE L2 2825 3312 -1 604 321 38 19 chr20 49263410 49263675 -17404330 - LTR16A LTR ERVL -165 285 16 1046 271 72 6 chr20 49263675 49264163 -17403842 + L2 LINE L2 2572 3089 -224 1288 209 72 0 chr20 49264167 49264445 -17403560 + MLT1D LTR MaLR 8 305 -200 1635 166 4 0 chr20 49264465 49264743 -17403262 + AluSx SINE Alu 31 309 -3 180 0 0 0 chr20 49264763 49264783 -17403222 + (GA)n Simple_repeat Simple_repeat 1 20 0 1019 102 0 32 chr20 49264786 49264972 -17403033 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 759 239 38 5 chr20 49264983 49265167 -17402838 + MLT1D LTR MaLR 316 505 0 543 278 91 17 chr20 49265201 49265377 -17402628 + L2 LINE L2 3108 3296 -17 1131 193 52 0 chr20 49265619 49265831 -17402174 + MIR SINE MIR 13 235 -27 312 289 0 0 chr20 49268986 49269166 -17398839 + (TG)n Simple_repeat Simple_repeat 1 180 0 231 264 0 0 chr20 49269183 49269236 -17398769 + (TG)n Simple_repeat Simple_repeat 2 54 0 810 263 15 42 chr20 49269759 49270018 -17397987 + MER112 DNA MER1_type 1 252 -4 388 250 36 9 chr20 49270719 49270831 -17397174 + MIR SINE MIR 49 163 -99 252 100 0 0 chr20 49270897 49270937 -17397068 - MIR SINE MIR -112 150 111 303 212 91 20 chr20 49271714 49271813 -17396192 - Charlie8 DNA MER1_type -2246 171 66 300 120 20 0 chr20 49271963 49272013 -17395992 - U7 snRNA snRNA -12 51 1 466 301 62 55 chr20 49272083 49272375 -17395630 + L2 LINE L2 3011 3304 -9 1967 143 7 0 chr20 49273581 49273882 -17394123 + AluSx SINE Alu 1 303 -9 499 236 107 111 chr20 49274023 49274079 -17393926 - MLT1J LTR MaLR -48 463 408 1973 153 0 3 chr20 49274079 49274387 -17393618 + AluSx SINE Alu 1 307 -5 499 236 107 111 chr20 49274387 49274571 -17393434 - MLT1J LTR MaLR -103 408 225 2650 117 44 5 chr20 49274571 49274981 -17393024 - MSTB LTR MaLR 0 426 1 499 236 107 111 chr20 49274981 49275129 -17392876 - MLT1J LTR MaLR -286 225 36 361 234 181 12 chr20 49275157 49275328 -17392677 - L1ME LINE L1 -371 5750 5551 236 316 0 0 chr20 49275747 49275826 -17392179 - L2 LINE L2 -313 3000 2922 528 237 0 0 chr20 49275827 49275924 -17392081 - MER81 DNA DNA -7 107 11 363 326 0 0 chr20 49275919 49276014 -17391991 - MER81 DNA DNA -19 95 1 * 475 280 118 29 chr20 49276096 49276447 -17391558 + MLT1J LTR MaLR 51 423 -27 234 169 62 31 chr20 49278177 49278242 -17389763 + MLT2D LTR ERVL 220 286 -128 255 210 0 65 chr20 49278286 49278348 -17389657 + MLT2D LTR ERVL 229 286 -128 242 255 10 61 chr20 49278919 49279017 -17388988 + MLT2B1 LTR ERVL 298 390 -130 383 303 87 17 chr20 49283137 49283378 -17384627 + L2 LINE L2 2719 2976 -338 312 287 56 36 chr20 49283374 49283569 -17384436 + L2 LINE L2 2836 3034 -238 * 315 106 0 0 chr20 49283703 49283750 -17384255 + MADE1 DNA Mariner 1 47 -33 311 154 0 0 chr20 49283780 49283832 -17384173 + MADE1 DNA Mariner 29 80 0 256 265 220 30 chr20 49283836 49283968 -17384037 + L2 LINE L2 3155 3311 -2 536 266 46 46 chr20 49284711 49284739 -17383266 + L2 LINE L2 3077 3104 -209 1726 179 9 46 chr20 49284739 49285063 -17382942 - AluJb SINE Alu 0 312 1 536 266 46 46 chr20 49285063 49285271 -17382734 + L2 LINE L2 3103 3313 0 2179 131 0 0 chr20 49285570 49285867 -17382138 - AluSx SINE Alu -11 301 5 2337 71 0 7 chr20 49286088 49286394 -17381611 + AluSc SINE Alu 1 304 0 203 77 77 46 chr20 49286404 49286469 -17381536 + (TATAA)n Simple_repeat Simple_repeat 2 68 0 957 157 0 7 chr20 49286881 49287028 -17380977 + AluSq/x SINE Alu 1 146 -167 401 299 30 63 chr20 49287645 49287917 -17380088 + L2 LINE L2 2783 3050 -263 451 327 126 5 chr20 49288137 49288360 -17379645 - MIR SINE MIR -5 257 8 324 238 119 32 chr20 49288926 49289052 -17378953 - MER63A DNA MER1_type 0 210 74 291 241 23 23 chr20 49290140 49290227 -17377778 + L2 LINE L2 3184 3270 -2 896 175 81 126 chr20 49291555 49291864 -17376141 + MER51C LTR ERV1 346 640 0 300 279 47 0 chr20 49291980 49292066 -17375939 - L1MC5 LINE L1 -35 7926 7837 228 300 0 0 chr20 49292120 49292180 -17375825 + (TG)n Simple_repeat Simple_repeat 1 60 0 511 260 17 40 chr20 49292180 49292357 -17375648 - L1MC4 LINE L1 -138 7904 7732 243 304 67 22 chr20 49292379 49292514 -17375491 - L1MC4 LINE L1 -368 7674 7534 * 1104 280 104 19 chr20 49292504 49293043 -17374962 + L1MC4 LINE L1 6883 7467 -575 313 316 52 0 chr20 49293795 49293931 -17374074 - L2 LINE L2 -2 3311 3169 298 343 87 14 chr20 49294087 49294376 -17373629 + LTR16C LTR ERVL 181 490 -1 325 322 83 3 chr20 49294394 49294708 -17373297 - L2 LINE L2 -163 3150 2812 478 333 79 20 chr20 49295356 49295659 -17372346 - LTR16A LTR ERVL -5 445 125 21 0 0 0 chr20 49295667 49295688 -17372317 + AT_rich Low_complexity Low_complexity 1 21 0 287 299 59 68 chr20 49296015 49296236 -17371769 + L1MC4a LINE L1 5683 5901 -1907 339 327 18 9 chr20 49296236 49296349 -17371656 - L1 LINE L1 -2902 3244 3131 398 226 83 54 chr20 49296405 49296609 -17371396 - L1 LINE L1 -3028 3118 2909 559 124 0 22 chr20 49296703 49296792 -17371213 + AluJo SINE Alu 50 136 -176 1209 227 124 41 chr20 49296983 49297442 -17370563 + MLT1J LTR MaLR 15 511 0 371 300 107 23 chr20 49297704 49297800 -17370205 + MER102b DNA MER1_type 8 95 -1333 1865 138 14 34 chr20 49297800 49298097 -17369908 + AluJb SINE Alu 1 291 -21 371 300 107 23 chr20 49298097 49298263 -17369742 + MER102b DNA MER1_type 95 292 -49 333 184 28 0 chr20 49298354 49298443 -17369562 + L1M2 LINE L1 5710 5807 -493 1781 178 20 14 chr20 49298539 49298573 -17369432 + L1PB4 LINE L1 5796 5828 -328 2354 105 0 3 chr20 49298573 49298879 -17369126 + AluSg SINE Alu 1 305 -5 1781 178 20 14 chr20 49298879 49299199 -17368806 + L1PB4 LINE L1 5828 6152 -4 606 226 89 32 chr20 49299271 49299316 -17368689 + L2 LINE L2 3113 3154 -159 512 219 53 30 chr20 49299316 49299485 -17368520 - MER104 DNA MER2_type -4 176 4 606 226 89 32 chr20 49299485 49299629 -17368376 + L2 LINE L2 3154 3313 0 1858 196 79 13 chr20 49300944 49301155 -17366850 - MER66B LTR ERV1 -2 484 288 2173 134 3 0 chr20 49301155 49301462 -17366543 - AluSx SINE Alu -4 308 1 1858 196 79 13 chr20 49301462 49301704 -17366301 - MER66B LTR ERV1 -198 288 1 661 262 107 24 chr20 49301973 49302263 -17365742 - MER113 DNA MER1_type? -122 399 86 748 249 51 28 chr20 49302263 49302480 -17365525 + MER58A DNA MER1_type 1 222 -2 281 300 148 24 chr20 49302555 49302765 -17365240 + MIR SINE MIR 15 250 -12 406 208 76 0 chr20 49303050 49303148 -17364857 + AluJo SINE Alu 1 88 -214 4187 144 97 31 chr20 49303148 49303994 -17364011 - MER4D LTR ERV1 0 903 2 1467 140 9 22 chr20 49303994 49304223 -17363782 + AluJo SINE Alu 84 309 -3 1969 185 38 7 chr20 49304254 49304671 -17363334 - LTR23 LTR ERV1 0 437 8 239 320 16 24 chr20 49305213 49305338 -17362667 + MLT1K LTR MaLR 463 586 -2 2755 192 15 27 chr20 49305373 49305961 -17362044 - LTR39 LTR ERV1 0 783 203 1975 162 63 28 chr20 49305962 49306497 -17361508 + MLT2A2 LTR ERVL 1 554 0 802 141 29 158 chr20 49306497 49306564 -17361441 - LTR39 LTR ERV1 -578 205 130 2348 146 57 0 chr20 49306564 49306969 -17361036 + MSTA LTR MaLR 1 428 0 802 141 29 158 chr20 49306969 49307137 -17360868 - LTR39 LTR ERV1 -653 130 1 294 226 214 0 chr20 49307245 49307329 -17360676 - MLT1J LTR MaLR -336 175 74 438 156 115 0 chr20 49308214 49308310 -17359695 - L2 LINE L2 0 3313 3207 285 200 125 0 chr20 49308339 49308419 -17359586 - L2 LINE L2 -41 3272 3183 2105 146 8 27 chr20 49308452 49308823 -17359182 - THE1B LTR MaLR 0 364 1 978 257 17 17 chr20 49310530 49310771 -17357234 + MIR SINE MIR 21 261 -1 237 258 94 25 chr20 49311172 49311331 -17356674 + L2 LINE L2 2593 2762 -552 424 270 63 0 chr20 49311589 49311715 -17356290 + L2 LINE L2 3167 3300 -13 213 318 75 28 chr20 49312432 49312539 -17355466 - MIR SINE MIR -22 240 129 1985 143 106 3 chr20 49312914 49313300 -17354705 + MSTB1 LTR MaLR 7 432 0 1042 218 10 10 chr20 49313302 49313508 -17354497 - MLT1A1 LTR MaLR -1 364 159 449 270 70 33 chr20 49313796 49314037 -17353968 + MLT1L LTR MaLR 366 615 0 212 359 86 43 chr20 49314038 49314272 -17353733 + L2 LINE L2 3028 3271 -1 2443 167 29 27 chr20 49314941 49315426 -17352579 - MER66B LTR ERV1 0 486 1 897 243 53 127 chr20 49315449 49315682 -17352323 + L2 LINE L2 2538 2787 -526 465 234 27 0 chr20 49315682 49315793 -17352212 - MER81 DNA DNA 0 114 1 897 243 53 127 chr20 49315793 49316376 -17351629 + L2 LINE L2 2787 3312 -1 197 343 0 0 chr20 49316958 49317028 -17350977 - MIR SINE MIR -117 145 76 383 250 129 7 chr20 49317042 49317182 -17350823 + MIR SINE MIR 8 164 -98 195 281 18 0 chr20 49317409 49317466 -17350539 + L2 LINE L2 3251 3308 -5 350 239 0 6 chr20 49317701 49317868 -17350137 + (CA)n Simple_repeat Simple_repeat 1 166 0 23 0 0 0 chr20 49318109 49318132 -17349873 + AT_rich Low_complexity Low_complexity 1 23 0 555 236 123 30 chr20 49318177 49318380 -17349625 + MER113 DNA MER1_type? 220 441 -80 411 132 0 0 chr20 49318562 49318630 -17349375 + (CA)n Simple_repeat Simple_repeat 1 68 0 578 293 98 31 chr20 49318681 49318937 -17349068 + LTR16C LTR ERVL 188 460 -31 2180 165 65 39 chr20 49318938 49319386 -17348619 + L1MB5 LINE L1 5671 6135 -39 2223 113 13 0 chr20 49319386 49319688 -17348317 + AluSx SINE Alu 1 306 -6 2180 165 65 39 chr20 49319688 49319730 -17348275 + L1MB5 LINE L1 6135 6174 0 270 100 25 0 chr20 49319731 49319771 -17348234 + LTR16C LTR ERVL 448 488 -3 747 341 128 21 chr20 49320232 49320762 -17347243 - L2 LINE L2 -585 2729 2143 330 222 0 0 chr20 49320805 49320868 -17347137 + MLT1D LTR MaLR 1 63 -442 1071 184 76 21 chr20 49320874 49321319 -17346686 + MLT1D LTR MaLR 1 505 0 319 221 141 88 chr20 49321443 49321692 -17346313 - MLT1L LTR MaLR -156 459 198 244 250 103 0 chr20 49322092 49322160 -17345845 - MLT1L LTR MaLR -540 75 1 964 203 28 19 chr20 49322205 49322417 -17345588 + MER20 DNA MER1_type 6 219 0 2099 107 7 4 chr20 49322491 49322772 -17345233 - AluSx SINE Alu -30 282 1 452 154 0 0 chr20 49322780 49322858 -17345147 + MER53 DNA DNA 112 189 0 331 292 69 7 chr20 49323578 49323722 -17344283 - MIR SINE MIR -10 252 100 185 283 85 47 chr20 49323985 49324091 -17343914 + MIR SINE MIR 32 141 -121 339 25 0 0 chr20 49325656 49325696 -17342309 + (CA)n Simple_repeat Simple_repeat 2 41 0 652 164 0 24 chr20 49325718 49325883 -17342122 + (CA)n Simple_repeat Simple_repeat 2 162 0 587 161 168 0 chr20 49326225 49326380 -17341625 + MER53 DNA DNA 7 187 -2 2240 116 10 0 chr20 49326534 49326828 -17341177 + AluSq SINE Alu 1 297 -16 229 318 0 0 chr20 49326891 49326954 -17341051 + MIR SINE MIR 71 133 -75 1486 150 127 8 chr20 49327252 49327512 -17340493 + AluSg1 SINE Alu 1 291 -18 371 243 220 6 chr20 49328951 49329100 -17338905 - MER5A DNA MER1_type 0 189 4 512 250 88 0 chr20 49329103 49329251 -17338754 - MER5B DNA MER1_type -17 161 1 5883 117 244 26 chr20 49329347 49330622 -17337383 - pTR5 LTR ERV1 -143 2295 743 356 197 79 70 chr20 49330635 49330763 -17337242 - MLT1L LTR MaLR -148 363 236 378 225 0 0 chr20 49330912 49330992 -17337013 + MER53 DNA DNA 105 184 -5 475 234 46 8 chr20 49331117 49331238 -17336767 - MLT1K LTR MaLR -341 247 135 1900 200 112 18 chr20 49331310 49331820 -17336185 + MER74A LTR ERVL 1 558 0 1030 273 79 14 chr20 49331829 49332196 -17335809 - L2 LINE L2 -3 3310 2920 309 250 186 16 chr20 49332559 49332683 -17335322 + L1MC4 LINE L1 7897 8041 -1 2127 133 64 11 chr20 49332895 49333270 -17334735 + MER44D DNA MER2_type 329 595 -10 403 302 127 24 chr20 49333848 49334100 -17333905 - L2 LINE L2 -2 3311 3034 * 588 309 106 37 chr20 49334097 49334447 -17333558 - L2 LINE L2 -518 2796 2423 484 250 0 9 chr20 49334649 49334761 -17333244 - MIR SINE MIR -104 158 48 2022 131 0 55 chr20 49334768 49334964 -17333041 - AluJo SINE Alu -1 311 139 1583 60 32 5 chr20 49334964 49335181 -17332824 - L1PA6 LINE L1 0 6154 5932 2022 131 0 55 chr20 49335181 49335313 -17332692 - AluJo SINE Alu -173 139 1 1132 271 33 5 chr20 49337025 49337504 -17330501 - L2 LINE L2 -233 3080 2590 534 117 0 0 chr20 49338006 49338083 -17329922 - MADE1 DNA Mariner -1 79 3 2237 84 3 40 chr20 49439529 49439826 -17228179 + AluSg SINE Alu 1 286 -24 218 147 441 15 chr20 49439830 49439898 -17228107 + MER5A DNA MER1_type 9 105 -84 232 196 59 0 chr20 49440028 49440079 -17227926 + MLT1J LTR MaLR 458 511 0 319 288 114 8 chr20 49440113 49440245 -17227760 - MIR SINE MIR -89 173 28 342 255 17 114 chr20 49440574 49440754 -17227251 - MER5A DNA MER1_type -9 180 8 2174 130 0 3 chr20 49440810 49441102 -17226903 - AluSx SINE Alu -21 291 1 2739 197 84 5 chr20 49441415 49441995 -17226010 + MLT1E2 LTR MaLR 1 626 0 597 273 123 30 chr20 49442212 49442612 -17225393 - L1ME4a LINE L1 -120 6001 5565 383 178 14 0 chr20 49443614 49443687 -17224318 - MER103 DNA DNA -80 86 13 188 260 60 0 chr20 49443786 49443836 -17224169 - MIR SINE MIR -68 140 88 766 140 0 22 chr20 49444289 49444425 -17223580 + L1PA6 LINE L1 6019 6151 -3 24 0 0 0 chr20 49444504 49444528 -17223477 + AT_rich Low_complexity Low_complexity 1 24 0 1769 148 91 26 chr20 49444631 49444839 -17223166 + MLT1A1 LTR MaLR 1 241 -124 2392 106 36 28 chr20 49444839 49445199 -17222806 - THE1B LTR MaLR -1 363 1 1769 148 91 26 chr20 49445199 49445329 -17222676 + MLT1A1 LTR MaLR 241 361 -4 906 204 23 41 chr20 49445595 49445815 -17222190 + MER20 DNA MER1_type 1 216 -3 238 298 48 19 chr20 49446554 49446658 -17221347 - MIR SINE MIR -108 154 48 324 48 0 0 chr20 49446796 49446838 -17221167 + (TG)n Simple_repeat Simple_repeat 1 42 0 717 242 15 14 chr20 49446850 49447062 -17220943 + MIR SINE MIR 13 225 -37 1486 279 13 21 chr20 49447627 49448101 -17219904 + MLT1K LTR MaLR 11 480 -108 21 0 0 0 chr20 49448463 49448484 -17219521 + AT_rich Low_complexity Low_complexity 1 21 0 365 291 112 81 chr20 49448645 49448930 -17219075 + L2 LINE L2 3016 3309 -4 707 129 57 0 chr20 49448986 49449110 -17218895 + L1MA2 LINE L1 6174 6304 0 190 294 71 35 chr20 49449334 49449419 -17218586 - MIR SINE MIR -68 194 107 2035 101 21 21 chr20 49450164 49450452 -17217553 - AluSx SINE Alu -24 288 1 639 288 22 11 chr20 49450643 49450827 -17217178 + MIR SINE MIR 64 249 -13 348 271 56 0 chr20 49450857 49450964 -17217041 - MIR SINE MIR -62 146 34 345 276 251 22 chr20 49451121 49451436 -17216569 - L2 LINE L2 -5 3308 2922 542 248 114 45 chr20 49451488 49451690 -17216315 - MLT1D LTR MaLR 0 505 290 408 191 0 0 chr20 49451730 49451814 -17216191 + CT-rich Low_complexity Low_complexity 3 86 0 1906 151 30 7 chr20 49451814 49452113 -17215892 - AluJo SINE Alu -6 306 1 2227 116 3 10 chr20 49452115 49452417 -17215588 - AluSq SINE Alu -13 300 1 828 163 59 7 chr20 49452417 49452552 -17215453 - AluJo SINE Alu -170 142 1 568 149 64 128 chr20 49452554 49452742 -17215263 - MLT1D LTR MaLR -312 193 18 339 205 54 127 chr20 49453033 49453130 -17214875 + MER5A DNA MER1_type 34 117 -72 2376 73 0 0 chr20 49453130 49453475 -17214530 - AluSx SINE Alu 0 345 1 339 205 54 127 chr20 49453475 49453542 -17214463 + MER5A DNA MER1_type 117 187 -2 2143 121 7 19 chr20 49453688 49453822 -17214183 + AluJb SINE Alu 1 135 -177 2265 102 0 3 chr20 49453822 49454138 -17213867 + AluSx SINE Alu 1 315 0 2143 121 7 19 chr20 49454138 49454309 -17213696 + AluJb SINE Alu 135 303 -9 283 355 22 14 chr20 49454400 49454538 -17213467 + MIR3 SINE MIR 2 140 -68 2379 203 33 16 chr20 49454708 49455255 -17212750 - MER68 LTR ERV1 -6 556 1 610 279 13 58 chr20 49455269 49455495 -17212510 + LTR67 LTR ERVL 3 218 -339 1364 165 5 5 chr20 49455499 49455723 -17212282 + AluJb SINE Alu 87 310 -2 266 297 86 48 chr20 49455746 49456015 -17211990 + LTR67 LTR ERVL 250 528 -29 881 224 124 30 chr20 49456056 49456386 -17211619 - MER113 DNA MER1_type? -44 477 117 557 265 118 41 chr20 49456905 49457245 -17210760 + L2 LINE L2 2855 3220 -93 561 225 35 12 chr20 49457246 49457415 -17210590 - MER45A DNA AcHobo -3 175 3 361 264 46 0 chr20 49457415 49457502 -17210503 + L2 LINE L2 3210 3300 -13 186 71 0 0 chr20 49457502 49457530 -17210475 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 905 208 85 30 chr20 49458442 49458678 -17209327 - MIR SINE MIR 0 262 14 559 268 48 22 chr20 49458855 49459035 -17208970 - MIR SINE MIR -62 146 8 423 263 17 25 chr20 49459124 49459242 -17208763 - MIR SINE MIR -138 124 8 292 256 171 39 chr20 49459352 49459481 -17208524 + MIR SINE MIR 21 125 -83 464 246 113 30 chr20 49460677 49460880 -17207125 + L2 LINE L2 2554 2773 -541 442 250 114 49 chr20 49460888 49461072 -17206933 + L2 LINE L2 3118 3313 0 693 288 30 5 chr20 49461262 49461460 -17206545 + MIR SINE MIR 1 203 -59 267 245 61 41 chr20 49461527 49461625 -17206380 - MIR SINE MIR -34 228 129 670 194 36 48 chr20 49461686 49461851 -17206154 + MER5B DNA MER1_type 1 163 -15 2146 125 4 0 chr20 49462250 49462573 -17205432 + AluSp SINE Alu 1 324 0 455 207 200 0 chr20 49462703 49462838 -17205167 + MER53 DNA DNA 28 189 0 427 293 112 52 chr20 49462871 49463103 -17204902 + MIR SINE MIR 17 262 0 500 217 154 83 chr20 49463173 49463320 -17204685 - L1ME4a LINE L1 -1 6120 5948 2303 107 3 0 chr20 49463320 49463618 -17204387 + AluSp SINE Alu 1 299 -14 500 217 154 83 chr20 49463618 49463710 -17204295 - L1ME4a LINE L1 -173 5948 5864 392 149 0 0 chr20 49463712 49463779 -17204226 + Tigger2 DNA MER2_type 1 67 -2651 * 2257 171 42 9 chr20 49463771 49464203 -17203802 + Tigger2 DNA MER2_type 2273 2718 0 232 194 155 29 chr20 49464244 49464347 -17203658 - L1ME4a LINE L1 -317 5804 5689 239 135 0 0 chr20 49465152 49465189 -17202816 - MER8 DNA MER2_type -29 210 174 * 1142 142 90 9 chr20 49465176 49465409 -17202596 + Tigger2 DNA MER2_type 2267 2518 -200 718 293 10 0 chr20 49465775 49465980 -17202025 + MIR SINE MIR 35 241 -21 328 293 152 49 chr20 49466033 49466197 -17201808 - MER5A DNA MER1_type 0 189 9 495 250 23 23 chr20 49466209 49466341 -17201664 + MER5A DNA MER1_type 49 180 -9 327 234 0 0 chr20 49466613 49466677 -17201328 - MER89 LTR ERV1 -298 261 198 309 188 16 0 chr20 49466651 49466715 -17201290 - MER89 LTR ERV1 -470 89 25 * 448 238 58 0 chr20 49467203 49467333 -17200672 - MIR SINE MIR -62 146 45 621 303 145 7 chr20 49468216 49468678 -17199327 + L1ME4a LINE L1 5461 5986 -135 578 319 76 17 chr20 49468822 49469060 -17198945 + MIR SINE MIR 7 258 -4 241 345 163 20 chr20 49470206 49470409 -17197596 + L3 LINE CR1 1277 1508 -69 203 331 90 15 chr20 49470472 49470605 -17197400 + MIR3 SINE MIR 2 144 -64 182 179 0 125 chr20 49470733 49470789 -17197216 - L2 LINE L2 0 3313 3265 2141 112 3 14 chr20 49471491 49471787 -17196218 + AluSx SINE Alu 1 293 -19 33 43 0 0 chr20 49471803 49471850 -17196155 + AT_rich Low_complexity Low_complexity 1 47 0 217 241 0 62 chr20 49471955 49472052 -17195953 + (TTATA)n Simple_repeat Simple_repeat 1 102 -337 2114 135 10 3 chr20 49472052 49472348 -17195657 + AluSx SINE Alu 1 298 -14 217 241 0 62 chr20 49472348 49472424 -17195581 + (TTATA)n Simple_repeat Simple_repeat 102 439 0 184 256 8 101 chr20 49472548 49472662 -17195343 - L2 LINE L2 -797 2517 2415 4796 171 29 15 chr20 49472662 49473569 -17194436 - MER49 LTR ERV1 0 923 5 184 256 8 101 chr20 49473569 49473583 -17194422 - L2 LINE L2 -899 2415 2401 41 0 0 0 chr20 49473786 49473827 -17194178 + AT_rich Low_complexity Low_complexity 1 41 0 1995 131 3 14 chr20 49473827 49474118 -17193887 - AluSq SINE Alu -23 290 3 563 246 71 14 chr20 49474203 49474414 -17193591 + MER113 DNA MER1_type? 2 224 -297 576 294 101 24 chr20 49474415 49474652 -17193353 - MIR SINE MIR -6 256 4 1026 228 25 89 chr20 49474663 49475022 -17192983 + MER58B DNA MER1_type 6 341 0 497 205 53 46 chr20 49475085 49475236 -17192769 + MER113 DNA MER1_type? 330 481 -40 1755 174 0 21 chr20 49475239 49475527 -17192478 + AluJo SINE Alu 1 282 -30 2406 76 0 0 chr20 49475534 49475825 -17192180 - AluSc SINE Alu -18 291 1 219 36 0 0 chr20 49475834 49475862 -17192143 + (A)n Simple_repeat Simple_repeat 1 28 0 181 116 23 23 chr20 49476555 49476598 -17191407 + CT-rich Low_complexity Low_complexity 3 45 0 2743 55 0 0 chr20 49476612 49476923 -17191082 + AluY SINE Alu 1 311 0 1479 176 72 15 chr20 49476932 49477194 -17190811 - AluJo SINE Alu -35 277 1 382 238 20 30 chr20 49477300 49477401 -17190604 - MIR SINE MIR -142 120 21 2398 90 0 0 chr20 49477671 49477970 -17190035 - AluSx SINE Alu -1 311 13 572 238 33 65 chr20 49477972 49478186 -17189819 - MER58A DNA MER1_type -16 208 2 23 0 0 0 chr20 49478244 49478267 -17189738 + AT_rich Low_complexity Low_complexity 1 23 0 295 320 48 61 chr20 49478845 49478992 -17189013 + MIR SINE MIR 21 165 -97 640 315 15 0 chr20 49479030 49479230 -17188775 - MIR SINE MIR -1 261 59 1154 270 107 48 chr20 49479608 49480186 -17187819 - MLT1L LTR MaLR -2 613 2 682 226 19 7 chr20 49480313 49480468 -17187537 + MIR SINE MIR 72 228 -34 820 238 98 49 chr20 49480499 49480526 -17187479 - MER102b DNA MER1_type -1105 323 299 494 298 0 9 chr20 49480526 49480640 -17187365 + MER81 DNA DNA 2 114 0 820 238 98 49 chr20 49480640 49480919 -17187086 - MER102b DNA MER1_type -1129 299 2 1936 147 3 3 chr20 49481449 49481735 -17186270 + AluSx SINE Alu 1 286 -26 519 45 0 0 chr20 49481752 49481818 -17186187 + (GA)n Simple_repeat Simple_repeat 2 67 0 1261 233 137 9 chr20 49482258 49482718 -17185287 + MER113 DNA MER1_type? 1 519 -2 210 255 85 0 chr20 49483096 49483143 -17184862 - L2 LINE L2 -3 3269 3219 333 309 59 22 chr20 49483302 49483438 -17184567 + L1ME LINE L1 352 492 -5924 668 329 32 42 chr20 49483933 49484313 -17183692 + LTR16C LTR ERVL 115 490 -1 1050 278 105 24 chr20 49484463 49485320 -17182685 + L1ME LINE L1 899 2031 -4576 481 176 0 0 chr20 49485431 49485505 -17182500 - Tigger2a DNA MER2_type 0 434 361 756 156 8 23 chr20 49485528 49485656 -17182349 - FLAM_C SINE Alu -16 127 2 2324 126 32 32 chr20 49485657 49485813 -17182192 - Tigger2a DNA MER2_type -2327 381 226 455 0 0 0 chr20 49485813 49485867 -17182138 + L1PA3 LINE L1 6099 6152 -3 2324 126 32 32 chr20 49485867 49486090 -17181915 - Tigger2a DNA MER2_type -2481 227 2 240 35 0 0 chr20 49486225 49486254 -17181751 + (TG)n Simple_repeat Simple_repeat 2 30 0 426 79 0 0 chr20 49486287 49486350 -17181655 + (TG)n Simple_repeat Simple_repeat 2 64 0 1122 174 5 19 chr20 49486356 49486563 -17181442 - AluJb SINE Alu -24 288 85 2086 248 100 29 chr20 49486575 49486996 -17181009 + L1ME LINE L1 2241 2631 -3795 2186 94 3 3 chr20 49486996 49487294 -17180711 - AluSp SINE Alu -13 300 3 2086 248 100 29 chr20 49487294 49487842 -17180163 + L1ME LINE L1 2631 3255 -3171 366 227 34 0 chr20 49487842 49487930 -17180075 + L1ME LINE L1 248 338 -6269 309 222 0 0 chr20 49487996 49488059 -17179946 + L1ME LINE L1 1239 1301 -5115 623 203 46 13 chr20 49488064 49488217 -17179788 + L1ME1 LINE L1 6007 6164 -2 2181 99 3 13 chr20 49488226 49488540 -17179465 + AluSp SINE Alu 1 311 -2 4422 253 86 48 chr20 49488542 49490523 -17177482 + L1ME LINE L1 3247 5388 -1062 2082 103 10 0 chr20 49490523 49490823 -17177182 - AluSc SINE Alu -6 303 1 4422 253 86 48 chr20 49490823 49491928 -17176077 + L1ME LINE L1 5388 6450 0 489 297 94 93 chr20 49491965 49492739 -17175266 - L2 LINE L2 -5 3267 2483 281 280 144 0 chr20 49493464 49493582 -17174423 - MLT1K LTR MaLR -285 303 169 2473 183 22 2 chr20 49494158 49494616 -17173389 - L1MB5 LINE L1 -6 6168 5702 502 312 32 0 chr20 49495165 49495351 -17172654 - MIR SINE MIR -6 256 65 253 288 14 0 chr20 49495546 49495619 -17172386 - MLT1K LTR MaLR -346 242 169 542 280 14 7 chr20 49495800 49495943 -17172062 + MIR SINE MIR 69 212 -50 524 338 31 5 chr20 49496158 49496380 -17171625 - MIR SINE MIR -30 232 5 226 235 123 25 chr20 49496795 49496876 -17171129 + MLT1K LTR MaLR 37 125 -463 242 311 126 7 chr20 49496929 49497080 -17170925 + MLT1K LTR MaLR 396 564 -24 481 259 14 49 chr20 49497231 49497374 -17170631 + MIR3 SINE MIR 43 180 -28 2214 88 0 3 chr20 49497377 49497673 -17170332 - AluSq SINE Alu -18 295 1 587 225 28 7 chr20 49499271 49499413 -17168592 - MLT1I LTR MaLR -189 220 76 2606 203 45 0 chr20 49499676 49500168 -17167837 + MLT2B1 LTR ERVL 1 514 -6 316 307 124 0 chr20 49500288 49500425 -17167580 + L2 LINE L2 3159 3312 -1 254 350 136 24 chr20 49500606 49500812 -17167193 + MIR SINE MIR 31 259 -3 942 234 50 9 chr20 49501099 49501321 -17166684 + MIR SINE MIR 31 261 -1 205 220 20 20 chr20 49501492 49501542 -17166463 + MIR SINE MIR 35 84 -178 214 235 191 0 chr20 49501858 49501926 -17166079 - L2 LINE L2 -5 3267 3187 1546 151 60 34 chr20 49502022 49502148 -17165857 + AluJo SINE Alu 1 122 -190 378 0 0 0 chr20 49502148 49502190 -17165815 + (TAA)n Simple_repeat Simple_repeat 2 43 0 1546 151 60 34 chr20 49502190 49502361 -17165644 + AluJo SINE Alu 122 306 -6 608 158 97 0 chr20 49502525 49502639 -17165366 + MER53 DNA DNA 1 125 -64 411 265 179 46 chr20 49503097 49503293 -17164712 + MIR SINE MIR 27 248 -14 468 248 22 29 chr20 49503522 49503659 -17164346 - L1ME4a LINE L1 -4 6117 5982 910 200 79 0 chr20 49503736 49503926 -17164079 - MER20 DNA MER1_type 0 219 15 314 342 84 37 chr20 49503934 49504124 -17163881 + MIR SINE MIR 10 208 -54 656 286 25 20 chr20 49504300 49504496 -17163509 + MIR SINE MIR 16 212 -50 290 130 0 0 chr20 49504511 49504557 -17163448 + MADE1 DNA Mariner 1 46 -34 243 178 164 0 chr20 49504865 49504938 -17163067 - L1MB5 LINE L1 -6 6168 6084 * 3677 159 56 2 chr20 49504934 49505564 -17162441 - L1MB3 LINE L1 -20 6163 5500 211 222 0 56 chr20 49505803 49505857 -17162148 - MIR SINE MIR -123 85 35 2312 33 0 0 chr20 49505949 49506221 -17161784 - AluY SINE Alu -39 272 1 1841 153 3 34 chr20 49506228 49506549 -17161456 - AluJb SINE Alu -1 311 1 313 315 25 0 chr20 49506921 49507083 -17160922 - L1ME LINE L1 -4604 1959 1794 1768 176 0 28 chr20 49507086 49507554 -17160451 - AluJo SINE Alu 0 459 1 1070 281 18 15 chr20 49507560 49507962 -17160043 - L1M3d LINE L1 -4516 1787 1265 1013 275 68 70 chr20 49507977 49508707 -17159298 - L1ME LINE L1 -5301 1071 343 323 217 128 117 chr20 49509226 49509286 -17158719 - L2 LINE L2 -36 3277 3219 2071 132 7 0 chr20 49509286 49509596 -17158409 + AluSx SINE Alu 1 312 0 323 217 128 117 chr20 49509596 49509715 -17158290 - L2 LINE L2 -94 3219 3096 880 213 43 29 chr20 49509835 49510042 -17157963 + MIR SINE MIR 45 254 -8 2137 144 49 0 chr20 49510123 49510469 -17157536 + MER47A DNA MER2_type 1 363 -3 1939 203 46 52 chr20 49511393 49511896 -17156109 - MLT1J LTR MaLR 0 511 12 289 288 88 0 chr20 49511981 49512061 -17155944 + MIR SINE MIR 105 191 -71 915 223 0 22 chr20 49512580 49512764 -17155241 + MLT1E1 LTR MaLR 475 654 0 260 220 220 14 chr20 49512801 49512942 -17155063 + MIR SINE MIR 88 257 -5 774 224 42 0 chr20 49513056 49513221 -17154784 - FAM SINE Alu -3 172 1 295 320 6 51 chr20 49513635 49513791 -17154214 - MER5A DNA MER1_type -12 177 29 1638 208 95 28 chr20 49513806 49514205 -17153800 + MER63B DNA MER1_type 5 430 -6 342 238 79 40 chr20 49514228 49514329 -17153676 + MER5B DNA MER1_type 73 177 -1 239 202 395 0 chr20 49514346 49514455 -17153550 + MER5A DNA MER1_type 9 160 -29 271 244 56 117 chr20 49514483 49514663 -17153342 - MER5A DNA MER1_type 0 189 21 432 284 115 16 chr20 49514896 49515079 -17152926 + MIR SINE MIR 6 206 -56 1015 155 0 22 chr20 49515668 49515849 -17152156 - AluJb SINE Alu -8 304 128 252 214 0 0 chr20 49515850 49515906 -17152099 + (TG)n Simple_repeat Simple_repeat 2 57 0 235 266 0 43 chr20 49515908 49516002 -17152003 + L1MC4 LINE L1 6614 6703 -1339 185 237 17 0 chr20 49516009 49516068 -17151937 + (TA)n Simple_repeat Simple_repeat 1 60 0 758 174 0 0 chr20 49516069 49516190 -17151815 - AluJb SINE Alu -189 123 3 1921 123 22 0 chr20 49516465 49516791 -17151214 + AluSx SINE Alu 1 332 0 272 146 0 21 chr20 49516970 49517018 -17150987 - L2 LINE L2 0 3272 3226 2856 212 123 7 chr20 49517021 49517715 -17150290 - MER45B DNA AcHobo -2 1038 265 388 343 35 0 chr20 49517724 49517867 -17150138 - MIR SINE MIR -87 175 28 249 298 17 28 chr20 49518222 49518408 -17149597 + L1ME4a LINE L1 5220 5406 -786 721 271 129 9 chr20 49518507 49518824 -17149181 + L2 LINE L2 2944 3298 -15 1983 127 13 0 chr20 49518852 49519151 -17148854 + AluSx SINE Alu 1 303 -9 323 232 101 7 chr20 49519603 49519741 -17148264 + L1ME4a LINE L1 5960 6110 -11 650 270 87 20 chr20 49520446 49520595 -17147410 - L2 LINE L2 -3 3310 3136 1769 263 39 52 chr20 49520595 49521332 -17146673 + HsTC2c DNA MER2_type 2 729 0 650 270 87 20 chr20 49521332 49521434 -17146571 - L2 LINE L2 -177 3136 3042 352 353 32 37 chr20 49522257 49522444 -17145561 + L3 LINE CR1 622 807 -770 713 255 53 15 chr20 49522479 49522695 -17145310 + MIR SINE MIR 36 257 -5 213 339 0 65 chr20 49522957 49523081 -17144924 + L3b LINE CR1 1102 1217 -366 21 0 0 0 chr20 49523083 49523104 -17144901 + AT_rich Low_complexity Low_complexity 1 21 0 2156 97 10 3 chr20 49523197 49523497 -17144508 - AluSq SINE Alu 0 313 12 236 228 0 35 chr20 49524059 49524116 -17143889 + Charlie8 DNA MER1_type 2358 2412 -5 281 267 0 0 chr20 49524131 49524191 -17143814 - MER5A DNA MER1_type 0 189 130 200 176 216 68 chr20 49524303 49524377 -17143628 - MIR SINE MIR 0 262 178 226 226 19 0 chr20 49524426 49524479 -17143526 - MIR SINE MIR -194 68 15 229 184 53 66 chr20 49524682 49524758 -17143247 + Tigger1 DNA MER2_type 1070 1144 -1274 740 257 75 18 chr20 49524940 49525166 -17142839 - MIR SINE MIR -10 252 14 189 287 230 0 chr20 49525370 49525457 -17142548 - L2 LINE L2 -217 3055 2949 2013 132 7 0 chr20 49526441 49526744 -17141261 - AluSg SINE Alu -5 305 1 439 347 13 0 chr20 49527010 49527160 -17140845 - MIR SINE MIR -63 199 48 1898 145 0 0 chr20 49527163 49527460 -17140545 + AluSx SINE Alu 6 302 -10 461 291 92 31 chr20 49527810 49528006 -17139999 - MIR SINE MIR -13 249 42 498 273 66 31 chr20 49528166 49528393 -17139612 - L1ME1 LINE L1 -3 6163 5929 315 235 137 0 chr20 49528455 49528557 -17139448 + MER102a DNA MER1_type 206 321 -9 501 325 34 30 chr20 49528565 49528825 -17139180 + MIR SINE MIR 2 261 -1 321 275 72 72 chr20 49529600 49529821 -17138184 - MIR SINE MIR -23 239 16 263 272 0 37 chr20 49529986 49530067 -17137938 + MIR SINE MIR 72 149 -113 910 124 0 29 chr20 49530117 49530254 -17137751 - FLAM_C SINE Alu 0 133 1 668 299 26 9 chr20 49530299 49530530 -17137475 - L2 LINE L2 -1375 1939 1705 27 29 0 0 chr20 49530778 49530812 -17137193 + AT_rich Low_complexity Low_complexity 1 34 0 490 309 161 20 chr20 49531439 49531843 -17136162 + L2 LINE L2 2852 3312 -1 438 235 0 0 chr20 49531888 49531973 -17136032 + L2 LINE L2 3223 3307 -6 2059 129 0 3 chr20 49532136 49532439 -17135566 - AluSx SINE Alu -10 302 1 245 262 71 12 chr20 49532443 49532527 -17135478 - MIR SINE MIR -81 181 93 277 227 77 86 chr20 49532664 49532807 -17135198 - L2 LINE L2 -215 3057 2920 1373 161 62 14 chr20 49532895 49533187 -17134818 - L1MB7 LINE L1 -18 6166 5861 277 122 20 0 chr20 49533198 49533247 -17134758 - L1MB2 LINE L1 0 6171 6122 1196 170 8 61 chr20 49533266 49533513 -17134492 - AluJb SINE Alu -49 263 30 349 129 0 65 chr20 49533516 49533578 -17134427 - L1MB7 LINE L1 -495 5688 5631 2531 156 22 5 chr20 49533925 49534336 -17133669 - MSTB LTR MaLR -7 419 2 633 307 65 9 chr20 49534337 49534568 -17133437 - MIR SINE MIR -6 256 13 502 329 7 0 chr20 49534596 49534748 -17133257 + MIR SINE MIR 56 208 -54 275 250 18 125 chr20 49535656 49535768 -17132237 + MER5A DNA MER1_type 7 106 -83 1338 241 145 19 chr20 49535788 49536208 -17131797 - MER20B DNA MER1_type -310 473 1 320 278 47 84 chr20 49536242 49536314 -17131691 + MIR SINE MIR 70 143 -119 1330 201 53 13 chr20 49536314 49536613 -17131392 + AluJo SINE Alu 2 312 0 320 278 47 84 chr20 49536613 49536731 -17131274 + MIR SINE MIR 143 253 -9 1012 203 15 20 chr20 49536752 49536949 -17131056 - MER58A DNA MER1_type -11 213 18 252 317 119 61 chr20 49537949 49538261 -17129744 + L2 LINE L2 2600 2929 -385 687 263 140 35 chr20 49538309 49538731 -17129274 - MLT1J LTR MaLR -4 507 42 1848 101 97 0 chr20 49539029 49539297 -17128708 + AluSx SINE Alu 1 294 -18 3404 217 41 17 chr20 49539351 49539549 -17128456 - L1ME1 LINE L1 -5 6161 5969 720 127 71 48 chr20 49539549 49539675 -17128330 - FLAM_C SINE Alu -4 129 1 3404 217 41 17 chr20 49539675 49540524 -17127481 - L1ME1 LINE L1 -197 5969 5094 371 291 82 0 chr20 49541594 49541704 -17126301 + L2 LINE L2 3151 3269 -3 214 313 12 24 chr20 49541757 49541840 -17126165 - MIR SINE MIR -20 242 161 704 333 6 0 chr20 49541882 49542065 -17125940 + MIR SINE MIR 2 185 -77 2021 143 0 3 chr20 49542110 49542418 -17125587 - AluSx SINE Alu -5 307 1 371 314 147 0 chr20 49542478 49542634 -17125371 + MIR SINE MIR 81 259 -3 327 285 118 70 chr20 49542656 49542926 -17125079 + L2 LINE L2 2985 3267 -5 1173 219 55 30 chr20 49543282 49543607 -17124398 - L1ME2 LINE L1 -15 6149 5816 621 306 83 12 chr20 49543778 49544020 -17123985 - MIR SINE MIR -2 260 2 571 247 65 0 chr20 49544122 49544276 -17123729 - LTR67 LTR ERVL -2 555 392 1678 156 3 44 chr20 49544362 49544683 -17123322 - AluJb SINE Alu -4 308 1 341 294 11 11 chr20 49544688 49544780 -17123225 - LTR67 LTR ERVL -352 205 114 4242 233 26 48 chr20 49544850 49545101 -17122904 - L1M4 LINE L1 -2440 3706 3451 2281 100 0 0 chr20 49545101 49545410 -17122595 - AluSc SINE Alu 0 309 1 4242 233 26 48 chr20 49545410 49546591 -17121414 - L1M4 LINE L1 -2695 3451 2304 522 228 44 9 chr20 49547573 49547687 -17120318 + MIR SINE MIR 88 205 -57 400 207 11 2 chr20 49547708 49547852 -17120153 + MER5A DNA MER1_type 6 189 0 183 279 0 0 chr20 49548367 49548410 -17119595 - MER5B DNA MER1_type -6 172 130 1698 208 104 30 chr20 49548431 49548930 -17119075 - L1ME3 LINE L1 -32 6130 5595 188 133 44 0 chr20 49548930 49548975 -17119030 + CT-rich Low_complexity Low_complexity 3 49 0 2849 68 16 8 chr20 49549025 49549394 -17118611 + THE1C LTR MaLR 3 374 -1 192 40 0 0 chr20 49549394 49549419 -17118586 + (TC)n Simple_repeat Simple_repeat 2 26 0 300 233 56 67 chr20 49549437 49549527 -17118478 + L1MC4 LINE L1 6614 6702 -1340 1629 158 0 18 chr20 49549528 49549806 -17118199 - AluJb SINE Alu -39 273 1 243 277 75 21 chr20 49549807 49549901 -17118104 - L1ME3 LINE L1 -564 5606 5508 356 299 63 8 chr20 49550503 49550630 -17117375 + MER20B DNA MER1_type 56 189 -594 781 292 36 8 chr20 49550682 49550932 -17117073 + MIR SINE MIR 6 262 0 857 206 60 49 chr20 49551016 49551283 -17116722 - LTR37B LTR ERV1 -2 466 197 1086 179 16 0 chr20 49551398 49551582 -17116423 - MER5A DNA MER1_type -2 187 1 448 266 29 40 chr20 49552426 49552599 -17115406 - MER20B DNA MER1_type -3 780 610 1328 108 0 5 chr20 49552625 49552810 -17115195 - AluSq SINE Alu -26 287 104 775 71 0 0 chr20 49552860 49552958 -17115047 - AluSq SINE Alu -213 99 2 1314 255 40 28 chr20 49552967 49553394 -17114611 - MER20B DNA MER1_type -191 592 161 687 341 179 13 chr20 49553473 49554003 -17114002 - L2 LINE L2 -605 2709 2092 397 266 97 38 chr20 49554584 49554923 -17113082 - MLT1H LTR MaLR -16 533 52 322 283 164 40 chr20 49555103 49555329 -17112676 - Charlie8 DNA MER1_type -1984 433 180 2019 171 94 3 chr20 49555329 49555721 -17112284 - MSTA LTR MaLR 0 428 1 938 90 7 28 chr20 49555721 49555866 -17112139 - MSTA-int LTR MaLR 0 1580 1439 3141 150 4 12 chr20 49555896 49556390 -17111615 - MSTA-int LTR MaLR -539 1041 552 2655 90 3 0 chr20 49556394 49556737 -17111268 + HERVL LTR ERVL 4705 5048 -606 327 264 47 0 chr20 49556823 49556929 -17111076 - Charlie8 DNA MER1_type -2224 193 83 27 0 0 0 chr20 49557213 49557240 -17110765 + AT_rich Low_complexity Low_complexity 1 27 0 507 264 119 48 chr20 49558217 49558486 -17109519 - MLT1J LTR MaLR -41 470 183 459 309 14 48 chr20 49558486 49558693 -17109312 - L2 LINE L2 -1 3312 3113 812 153 68 23 chr20 49559374 49559551 -17108454 + MER53 DNA DNA 2 186 -3 1008 253 125 44 chr20 49559737 49560530 -17107475 - L2 LINE L2 -2 3311 2462 616 267 129 12 chr20 49560910 49561150 -17106855 - MLT1G1 LTR MaLR 0 595 328 771 269 78 0 chr20 49561151 49561344 -17106661 + MIR SINE MIR 53 260 -2 1213 214 56 65 chr20 49562675 49562797 -17105208 + MLT1C LTR MaLR 6 128 -339 2353 97 80 9 chr20 49562797 49563136 -17104869 + THE1B LTR MaLR 1 363 -1 1213 214 56 65 chr20 49563136 49563442 -17104563 + MLT1C LTR MaLR 128 430 -37 2180 97 13 0 chr20 49563582 49563890 -17104115 - AluSx SINE Alu 0 312 1 247 246 31 15 chr20 49564145 49564160 -17103845 - L2 LINE L2 0 3272 3259 3865 128 12 44 chr20 49564160 49564671 -17103334 - MER51A LTR ERV1 0 634 147 1725 111 53 4 chr20 49564671 49564933 -17103072 + AluSg SINE Alu 24 298 -12 3865 128 12 44 chr20 49564933 49565076 -17102929 - MER51A LTR ERV1 -487 147 1 247 246 31 15 chr20 49565076 49565125 -17102880 - L2 LINE L2 -13 3259 3207 322 295 21 0 chr20 49565207 49565302 -17102703 + MIR SINE MIR 166 262 0 2224 140 62 82 chr20 49565999 49566463 -17101542 + LTR32 LTR ERVL 17 471 0 290 314 66 7 chr20 49566543 49566680 -17101325 + Charlie8 DNA MER1_type 30 174 -2243 308 306 13 79 chr20 49566724 49566953 -17101052 - L1ME4a LINE L1 -137 5984 5771 232 125 83 0 chr20 49566984 49567080 -17100925 + (TA)n Simple_repeat Simple_repeat 1 104 0 348 213 30 30 chr20 49567111 49567275 -17100730 + (TTATA)n Simple_repeat Simple_repeat 5 168 0 384 169 78 0 chr20 49567298 49567464 -17100541 + (TA)n Simple_repeat Simple_repeat 1 179 0 2442 136 13 10 chr20 49567491 49567889 -17100116 - L1PB3 LINE L1 -49 6105 5707 2086 115 3 0 chr20 49568112 49568407 -17099598 + AluSg SINE Alu 1 296 -14 1039 215 128 68 chr20 49568611 49569080 -17098925 - MLT1D LTR MaLR -6 499 3 470 319 75 35 chr20 49569086 49569312 -17098693 + MIR SINE MIR 20 254 -8 251 250 15 0 chr20 49569597 49569665 -17098340 - MIR SINE MIR -129 133 65 2330 235 64 76 chr20 49570383 49570920 -17097085 - L1MC4a LINE L1 -947 6861 6338 2190 46 0 0 chr20 49570920 49571180 -17096825 - AluY SINE Alu -16 295 36 2330 235 64 76 chr20 49571180 49571561 -17096444 - L1MC4a LINE L1 -1470 6338 5954 433 254 161 9 chr20 49572212 49572429 -17095576 + L2 LINE L2 2808 3057 -256 2028 166 26 6 chr20 49572446 49572795 -17095210 - MLT1B LTR MaLR -34 356 1 184 264 35 104 chr20 49572795 49572939 -17095066 + L2 LINE L2 3051 3184 -129 314 170 70 110 chr20 49572957 49573057 -17094948 - Charlie5 DNA MER1_type 0 2622 2527 3319 89 22 0 chr20 49573057 49573507 -17094498 - L1PA8 LINE L1 -1 6171 5712 2117 86 33 0 chr20 49573507 49573811 -17094194 + L1P LINE L1 5060 5373 -773 630 153 80 0 chr20 49573811 49573961 -17094044 - Charlie5 DNA MER1_type -67 2545 2384 * 1760 119 96 3 chr20 49573960 49574253 -17093752 - MER4C LTR ERV1 -4 461 142 218 205 55 118 chr20 49574253 49574380 -17093625 - L2 LINE L2 -570 2744 2626 * 255 318 65 30 chr20 49574374 49574652 -17093353 - L2 LINE L2 -262 3010 2721 183 42 0 0 chr20 49574891 49574915 -17093090 + (TTA)n Simple_repeat Simple_repeat 1 24 0 447 271 127 17 chr20 49575276 49575512 -17092493 - L2 LINE L2 -481 2833 2572 5036 83 6 0 chr20 49576526 49577179 -17090826 - PABL_A LTR ERV1 -1 659 3 566 242 8 8 chr20 49577285 49577417 -17090588 - MIR SINE MIR -126 136 5 731 189 18 105 chr20 49577828 49578056 -17089949 - MER3 DNA MER1_type 0 209 2 806 282 40 9 chr20 49578140 49578367 -17089638 - MIR SINE MIR -26 236 3 832 306 87 58 chr20 49579082 49579532 -17088473 + L2 LINE L2 2380 2816 -497 2342 83 0 3 chr20 49579532 49579834 -17088171 - AluSx SINE Alu -11 301 1 832 306 87 58 chr20 49579834 49580295 -17087710 + L2 LINE L2 2816 3312 -1 207 0 0 0 chr20 49580327 49580350 -17087655 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 250 211 17 116 chr20 49580811 49580941 -17087064 - L1M4 LINE L1 -2557 3589 3473 * 265 270 175 17 chr20 49580918 49581178 -17086827 - L1MEc LINE L1 -4937 1694 1279 226 331 16 57 chr20 49581672 49581796 -17086209 - L1MEc LINE L1 -5949 982 864 2584 146 29 5 chr20 49581975 49582393 -17085612 - MSTA LTR MaLR 0 428 1 417 346 97 0 chr20 49582557 49582742 -17085263 - MIR SINE MIR -14 248 46 1669 230 19 19 chr20 49583727 49584092 -17083913 + MLT1A1 LTR MaLR 1 365 0 519 135 42 10 chr20 49584169 49584265 -17083740 + MER53 DNA DNA 91 189 0 1437 171 14 138 chr20 49584691 49585117 -17082888 + MLT1A2 LTR MaLR 1 373 -1 2175 102 35 0 chr20 49585297 49585581 -17082424 - AluSx SINE Alu -18 294 1 1550 150 0 129 chr20 49585615 49585956 -17082049 + AluJo SINE Alu 16 312 0 402 298 168 11 chr20 49586195 49586386 -17081619 + MIR SINE MIR 8 228 -34 244 205 217 12 chr20 49586549 49586632 -17081373 - MIR SINE MIR -117 145 46 180 77 0 0 chr20 49587049 49587075 -17080930 + (TC)n Simple_repeat Simple_repeat 2 27 0 263 272 37 0 chr20 49587277 49587358 -17080647 - MIR SINE MIR -71 191 108 552 213 82 63 chr20 49587644 49587851 -17080154 - MER20 DNA MER1_type -3 216 6 757 300 16 9 chr20 49587898 49588192 -17079813 - L1ME LINE L1 -404 5766 5474 1987 106 0 0 chr20 49588620 49588874 -17079131 - AluSg SINE Alu -7 303 50 1587 197 0 13 chr20 49589109 49589408 -17078597 - AluJo SINE Alu -6 306 12 216 277 60 12 chr20 49589458 49589541 -17078464 - MIR SINE MIR -116 146 60 1822 144 75 3 chr20 49589798 49590118 -17077887 + MER61A LTR ERV1 1 343 0 1913 117 166 3 chr20 49590901 49591226 -17076779 + MER83B LTR ERV1 1 378 0 181 214 31 153 chr20 49591498 49591596 -17076409 - MIR SINE MIR -78 184 99 348 346 22 9 chr20 49591963 49592117 -17075888 - MER5A DNA MER1_type 0 189 25 312 351 114 30 chr20 49592341 49592640 -17075365 - L2 LINE L2 -3 3269 2946 379 298 99 0 chr20 49592846 49592987 -17075018 - MIR SINE MIR -24 238 84 432 174 70 0 chr20 49593082 49593168 -17074837 - LTR50 LTR ERVL -690 105 14 327 331 38 8 chr20 49593964 49594097 -17073908 - MIR3 SINE MIR -67 141 5 3550 149 55 35 chr20 49594556 49595269 -17072736 - LTR8A LTR ERV1 0 727 1 1730 163 58 16 chr20 49595331 49595694 -17072311 - MER21B LTR ERV1 -1 862 485 1931 229 94 46 chr20 49595700 49596118 -17071887 + MER50 LTR ERV1 10 475 -259 2225 104 3 10 chr20 49596118 49596415 -17071590 + AluY SINE Alu 1 295 -16 1931 229 94 46 chr20 49596415 49596687 -17071318 + MER50 LTR ERV1 475 733 -1 1750 229 41 28 chr20 49596688 49597125 -17070880 - MER21B LTR ERV1 -375 488 46 559 228 118 99 chr20 49597128 49597492 -17070513 + MLT1K LTR MaLR 109 479 -109 2594 154 62 39 chr20 49597495 49597752 -17070253 + LTR26B LTR ERV1 1 251 -280 3317 156 42 72 chr20 49597752 49598462 -17069543 + LTR8 LTR ERV1 3 691 0 2594 154 62 39 chr20 49598462 49598723 -17069282 + LTR26B LTR ERV1 251 531 0 259 216 40 40 chr20 49598723 49598796 -17069209 + MLT1K LTR MaLR 476 548 -40 3819 185 30 23 chr20 49599163 49599926 -17068079 - LTR39 LTR ERV1 0 783 13 3805 71 23 2 chr20 49599926 49600406 -17067599 - LTR2B LTR ERV1 0 490 1 3819 185 30 23 chr20 49600406 49600420 -17067585 - LTR39 LTR ERV1 -770 13 1 920 283 36 36 chr20 49600546 49600907 -17067098 - L1ME3A LINE L1 0 6170 5810 581 262 30 18 chr20 49600915 49601079 -17066926 - MER58B DNA MER1_type 0 341 176 1517 236 47 28 chr20 49601187 49601653 -17066352 - L1ME3A LINE L1 -359 5811 5337 2573 89 14 27 chr20 49602293 49602662 -17065343 - THE1B LTR MaLR 0 364 1 468 0 0 0 chr20 49602667 49602719 -17065286 + (TG)n Simple_repeat Simple_repeat 1 52 0 180 97 0 0 chr20 49602719 49602750 -17065255 + (GA)n Simple_repeat Simple_repeat 2 32 0 2244 210 60 4 chr20 49603575 49604060 -17063945 - MER68 LTR ERV1 -1 561 50 314 319 90 11 chr20 49604089 49604277 -17063728 - MIR SINE MIR -59 203 1 687 256 63 17 chr20 49604313 49604559 -17063446 - MIR SINE MIR -2 260 1 2533 48 16 3 chr20 49605646 49605955 -17062050 + AluSp SINE Alu 1 313 0 352 297 149 7 chr20 49605967 49606115 -17061890 + MIR SINE MIR 86 254 -8 257 310 35 21 chr20 49606543 49606685 -17061320 + MLT1K LTR MaLR 436 579 -9 302 286 66 0 chr20 49606734 49606825 -17061180 + L2 LINE L2 3168 3264 -8 243 301 145 21 chr20 49607217 49607403 -17060602 - MLT1K LTR MaLR -61 527 319 266 225 0 38 chr20 49607451 49607531 -17060474 - MLT1K LTR MaLR -357 231 155 2220 113 0 3 chr20 49607533 49607826 -17060179 - AluSq SINE Alu -21 292 1 378 339 27 27 chr20 49608241 49608427 -17059578 + MIR SINE MIR 76 261 -1 469 246 95 8 chr20 49608519 49608645 -17059360 + MIR SINE MIR 34 170 -92 387 60 0 0 chr20 49608647 49608697 -17059308 + (TG)n Simple_repeat Simple_repeat 1 50 0 208 370 0 12 chr20 49608766 49608847 -17059158 + L2 LINE L2 3188 3267 -5 587 257 80 28 chr20 49608927 49609365 -17058640 - MLT1J LTR MaLR -3 508 4 3907 123 25 0 chr20 49609653 49610264 -17057741 + L1PA13 LINE L1 5501 6126 -37 226 321 24 12 chr20 49610519 49610603 -17057402 + L2 LINE L2 3174 3258 -14 223 261 154 0 chr20 49610678 49610743 -17057262 + L2 LINE L2 3184 3258 -14 389 298 78 0 chr20 49610897 49611038 -17056967 - MIR SINE MIR -19 243 92 1413 148 0 0 chr20 49611049 49611265 -17056740 + MER58A DNA MER1_type 1 216 -8 553 313 127 25 chr20 49611308 49611860 -17056145 - L2 LINE L2 -493 2821 2214 1018 279 58 16 chr20 49612900 49613365 -17054640 - MLT1K LTR MaLR -59 529 10 258 227 61 0 chr20 49613606 49613672 -17054333 + CT-rich Low_complexity Low_complexity 1 70 0 621 264 191 23 chr20 49613672 49614017 -17053988 - L2 LINE L2 -14 3299 2897 399 231 112 37 chr20 49614300 49614434 -17053571 - MIR3 SINE MIR -62 146 3 975 313 52 47 chr20 49615203 49615669 -17052336 + MLT1K LTR MaLR 10 477 -111 486 305 48 20 chr20 49616178 49616369 -17051636 + MIR SINE MIR 32 238 -24 338 289 72 69 chr20 49616554 49616831 -17051174 - L2 LINE L2 -182 3090 2813 2335 96 0 13 chr20 49616888 49617220 -17050785 - AluSc SINE Alu 0 309 1 229 317 30 30 chr20 49617220 49617321 -17050684 - L2 LINE L2 -564 2750 2650 341 292 87 49 chr20 49617700 49617885 -17050120 - MIR SINE MIR 0 262 71 755 180 22 0 chr20 49617909 49618048 -17049957 - L1MD3 LINE L1 -20 7975 7834 1982 182 7 43 chr20 49618055 49618474 -17049531 + MLT1D LTR MaLR 8 411 -94 1755 137 178 8 chr20 49618474 49618840 -17049165 - MSTA LTR MaLR 0 428 1 424 207 23 0 chr20 49618842 49618929 -17049076 + MLT1D LTR MaLR 417 505 0 1169 208 30 4 chr20 49618929 49619194 -17048811 - L1MD3 LINE L1 -157 7838 7567 2584 182 11 61 chr20 49619549 49619717 -17048288 + MLT2B1 LTR ERVL 1 176 -344 2117 123 0 3 chr20 49619717 49620002 -17048003 - AluSx SINE Alu -28 284 1 2584 182 11 61 chr20 49620002 49620378 -17047627 + MLT2B1 LTR ERVL 176 518 -2 1991 140 0 4 chr20 49620398 49620677 -17047328 - AluSx SINE Alu -24 288 11 1744 149 3 66 chr20 49621093 49621395 -17046610 + AluJb SINE Alu 5 287 -25 180 0 0 0 chr20 49621500 49621520 -17046485 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1166 247 101 77 chr20 49621528 49622111 -17045894 - MLT1L LTR MaLR -18 597 1 225 315 108 27 chr20 49622112 49622223 -17045782 - L2 LINE L2 -11 3261 3142 884 260 25 29 chr20 49622232 49622509 -17045496 - MLT1K LTR MaLR -8 580 305 476 239 94 44 chr20 49622551 49622710 -17045295 - MLT1K LTR MaLR -409 179 13 307 237 32 129 chr20 49623177 49623363 -17044642 + MIR SINE MIR 60 227 -35 424 247 123 25 chr20 49623441 49623603 -17044402 - MIR SINE MIR -37 225 48 918 197 12 63 chr20 49623621 49623875 -17044130 + MER96B DNA MER1_type? 1 241 -176 300 191 15 153 chr20 49624731 49624862 -17043143 + MER102b DNA MER1_type 199 311 -30 654 266 75 18 chr20 49624978 49625204 -17042801 - MLT1K LTR MaLR -41 547 309 237 264 82 36 chr20 49625260 49625370 -17042635 - MLT1K LTR MaLR -447 141 27 505 219 22 22 chr20 49625423 49625560 -17042445 + MLT1H LTR MaLR 98 234 -315 2374 134 25 6 chr20 49625699 49626056 -17041949 - THE1B LTR MaLR 0 364 1 255 236 97 0 chr20 49626057 49626129 -17041876 + MLT1G LTR MaLR 512 590 0 348 262 131 36 chr20 49626238 49626406 -17041599 + MIR SINE MIR 63 246 -16 283 300 30 10 chr20 49626514 49626614 -17041391 + MIR SINE MIR 17 118 -144 328 254 52 87 chr20 49626795 49626968 -17041037 + MER5A DNA MER1_type 2 168 -21 423 263 186 16 chr20 49627340 49627652 -17040353 + MER113 DNA MER1_type? 75 439 -82 1105 213 42 4 chr20 49627653 49627892 -17040113 - MER82 DNA MER2_type 0 653 406 1437 201 14 7 chr20 49627952 49628236 -17039769 - MER82 DNA MER2_type -367 286 1 195 304 54 36 chr20 49628317 49628429 -17039576 - MIR SINE MIR -60 148 35 348 261 109 14 chr20 49628750 49628888 -17039117 - L1ME4a LINE L1 0 6121 5971 1563 116 4 17 chr20 49629146 49629282 -17038723 + MER30 DNA MER1_type 1 134 -96 2340 113 3 0 chr20 49629282 49629591 -17038414 - AluSg SINE Alu 0 310 1 1563 116 4 17 chr20 49629591 49629687 -17038318 + MER30 DNA MER1_type 134 230 0 251 279 0 47 chr20 49629773 49629859 -17038146 - MIR SINE MIR -112 150 69 1669 173 30 77 chr20 49630114 49630519 -17037486 + MER58D DNA MER1_type 1 386 0 1708 145 38 24 chr20 49630684 49630973 -17037032 + AluJo SINE Alu 1 293 -19 2100 135 26 32 chr20 49631351 49631728 -17036277 - THE1C LTR MaLR 0 375 1 475 281 76 78 chr20 49632528 49633004 -17035001 - L1ME4a LINE L1 -337 5784 5310 2364 214 54 0 chr20 49633284 49633841 -17034164 + L1MB5 LINE L1 5588 6174 0 1484 171 104 0 chr20 49633999 49634250 -17033755 + AluJo SINE Alu 2 278 -34 297 128 0 0 chr20 49634250 49634297 -17033708 + (CA)n Simple_repeat Simple_repeat 2 48 0 328 290 19 56 chr20 49634716 49634878 -17033127 + MIR SINE MIR 107 262 0 232 220 132 44 chr20 49635740 49635831 -17032174 - MIR SINE MIR -136 126 28 2212 147 18 35 chr20 49636005 49636278 -17031727 + MLT1B LTR MaLR 1 266 -124 1949 105 3 67 chr20 49636278 49636618 -17031387 + AluSx SINE Alu 5 312 0 2212 147 18 35 chr20 49636618 49636739 -17031266 + MLT1B LTR MaLR 266 388 -2 509 292 18 18 chr20 49637353 49637524 -17030481 + MIR3 SINE MIR 28 198 -10 419 276 80 25 chr20 49637552 49637715 -17030290 + MIR SINE MIR 91 262 0 587 298 196 45 chr20 49637741 49638036 -17029969 - L2 LINE L2 0 3313 2955 961 194 8 109 chr20 49638036 49638150 -17029855 + MER58A DNA MER1_type 1 78 -2342 2326 99 3 16 chr20 49638150 49638463 -17029542 - AluSq SINE Alu -4 309 1 961 194 8 109 chr20 49638463 49638596 -17029409 + MER58A DNA MER1_type 78 223 -1 587 298 196 45 chr20 49638596 49638652 -17029353 - L2 LINE L2 -358 2955 2909 2587 121 40 62 chr20 49638780 49639277 -17028728 - LTR19A LTR ERV1 0 486 1 252 278 0 0 chr20 49639671 49639743 -17028262 + L1 LINE L1 2459 2530 -3616 318 226 107 0 chr20 49639743 49639827 -17028178 + MIR SINE MIR 99 191 -71 525 206 52 53 chr20 49639834 49640050 -17027955 + MER58 DNA MER1_type 1 2417 -3 713 277 52 12 chr20 49640189 49640438 -17027567 - MIR SINE MIR -2 260 2 2399 44 0 0 chr20 49640570 49640926 -17027079 + L1PA4 LINE L1 5836 6191 0 317 285 39 39 chr20 49641220 49641350 -17026655 - MIR SINE MIR -124 138 9 203 282 59 47 chr20 49641970 49642055 -17025950 - L2 LINE L2 -1 3271 3186 2840 196 134 41 chr20 49642061 49643008 -17024997 - LTR28 LTR ERV1 -1 1019 1 451 252 172 55 chr20 49643008 49643361 -17024644 - L2 LINE L2 -168 3145 2740 1179 89 60 0 chr20 49643467 49643635 -17024370 - MER4E LTR ERV1 0 779 602 1884 124 142 15 chr20 49643638 49644153 -17023852 - MER4A LTR ERV1 -2 662 16 3399 122 95 24 chr20 49644253 49644875 -17023130 - MER4D LTR ERV1 -237 666 1 267 351 61 0 chr20 49645559 49645673 -17022332 - MIR SINE MIR -6 256 136 2409 100 0 0 chr20 49645889 49646198 -17021807 - AluSg SINE Alu -1 309 1 250 229 171 0 chr20 49647179 49647249 -17020756 + MIR SINE MIR 49 130 -132 221 178 0 22 chr20 49647543 49647588 -17020417 + CT-rich Low_complexity Low_complexity 5 48 0 932 219 10 0 chr20 49647730 49647931 -17020074 + MER58A DNA MER1_type 1 203 -21 195 330 50 0 chr20 49648033 49648133 -17019872 - L2 LINE L2 -27 3245 3141 313 226 176 0 chr20 49648210 49648312 -17019693 + LTR33A LTR ERVL 94 213 -310 315 323 26 36 chr20 49648525 49648720 -17019285 + L1ME3A LINE L1 5595 5787 -375 2598 125 56 16 chr20 49648759 49649190 -17018815 + MER83 LTR ERV1 1 448 0 382 246 130 29 chr20 49649456 49649576 -17018429 + L1ME3A LINE L1 6011 6148 -22 1744 173 13 29 chr20 49649576 49649883 -17018122 - AluJo SINE Alu -10 302 1 382 246 130 29 chr20 49649883 49649900 -17018105 + L1ME3A LINE L1 6148 6162 -8 723 169 127 0 chr20 49649905 49650047 -17017958 + MSTA LTR MaLR 1 160 -268 2502 158 16 84 chr20 49650082 49650691 -17017314 - MER4B LTR ERV1 -42 568 1 310 125 0 0 chr20 49650696 49650744 -17017261 + MSTA LTR MaLR 172 219 -209 * 398 121 15 0 chr20 49650737 49650803 -17017202 + MSTA LTR MaLR 362 428 0 1882 158 102 14 chr20 49650823 49651185 -17016820 - MER61B LTR ERV1 -29 396 3 1063 215 44 9 chr20 49651261 49651489 -17016516 + MER46A DNA MER2_type 1 236 0 260 303 34 0 chr20 49651681 49651770 -17016235 + MIR SINE MIR 78 169 -93 1061 177 30 5 chr20 49652166 49652369 -17015636 + MER20 DNA MER1_type 4 211 -8 1425 211 126 5 chr20 49652787 49653161 -17014844 - MLT1E2 LTR MaLR -97 529 111 474 237 40 26 chr20 49653957 49654109 -17013896 + MER117 DNA MER1_type 13 166 -31 535 260 201 6 chr20 49654180 49654349 -17013656 + MIR SINE MIR 12 213 -49 2181 107 3 27 chr20 49654388 49654687 -17013318 + AluSx SINE Alu 1 292 -20 299 311 51 59 chr20 49654702 49654956 -17013049 - L2 LINE L2 -102 3170 2919 388 261 101 68 chr20 49655204 49655267 -17012738 - MLT1J LTR MaLR -119 392 333 1169 263 102 67 chr20 49655267 49655838 -17012167 - MLT1E LTR MaLR -2 591 1 388 261 101 68 chr20 49655838 49656100 -17011905 - MLT1J LTR MaLR -178 333 56 243 0 0 0 chr20 49656103 49656130 -17011875 + (GGAGA)n Simple_repeat Simple_repeat 5 31 0 223 253 9 162 chr20 49656233 49656462 -17011543 - L2 LINE L2 -1 3312 3119 827 266 141 46 chr20 49656592 49657118 -17010887 + MLT1G1 LTR MaLR 3 578 -17 532 313 28 28 chr20 49657126 49657343 -17010662 - L2 LINE L2 -220 3052 2836 907 48 0 0 chr20 49657409 49657512 -17010493 - AluSc SINE Alu -13 296 194 183 42 0 0 chr20 49657855 49657879 -17010126 + (TTG)n Simple_repeat Simple_repeat 2 25 0 531 301 73 12 chr20 49658090 49658336 -17009669 - MLT1K LTR MaLR -325 263 3 2068 144 46 30 chr20 49658488 49658857 -17009148 - THE1C LTR MaLR 0 375 1 269 315 46 61 chr20 49658863 49659060 -17008945 - MIR SINE MIR -50 212 19 483 314 35 18 chr20 49659205 49659374 -17008631 - MIR SINE MIR -57 205 34 623 239 0 8 chr20 49660275 49660537 -17007468 + (CA)n Simple_repeat Simple_repeat 1 259 0 966 294 104 36 chr20 49660943 49661364 -17006641 + L2 LINE L2 2844 3293 -20 581 302 33 20 chr20 49661609 49661854 -17006151 + MIR SINE MIR 13 260 -2 450 185 130 9 chr20 49661888 49661996 -17006009 + MIR3 SINE MIR 75 195 -13 316 300 94 6 chr20 49662393 49662672 -17005333 - MLT1K LTR MaLR -15 573 219 216 300 0 0 chr20 49662763 49662833 -17005172 + (TG)n Simple_repeat Simple_repeat 1 70 0 589 196 106 39 chr20 49662985 49663164 -17004841 + MIR SINE MIR 17 207 -55 1845 243 48 74 chr20 49663681 49664289 -17003716 - MLT1E LTR MaLR 0 593 2 880 204 92 5 chr20 49665141 49665347 -17002658 - MER58A DNA MER1_type 0 224 1 1818 166 0 3 chr20 49665482 49665796 -17002209 - AluJb SINE Alu 0 313 1 1948 243 42 25 chr20 49666566 49667164 -17000841 - MLT2F LTR ERVL -55 608 1 546 263 134 6 chr20 49667266 49667477 -17000528 + MIR SINE MIR 13 250 -12 605 231 16 0 chr20 49668059 49668180 -16999825 - L2 LINE L2 -1 3312 3190 345 176 198 11 chr20 49668184 49668275 -16999730 + MLT1F LTR MaLR 1 108 -434 186 143 0 0 chr20 49668283 49668318 -16999687 + (TGGG)n Simple_repeat Simple_repeat 2 36 0 682 132 52 5 chr20 49668335 49668758 -16999247 + (TAGA)n Simple_repeat Simple_repeat 1 443 0 310 312 46 9 chr20 49668834 49668943 -16999062 - MIR SINE MIR -27 235 123 706 214 86 5 chr20 49668943 49669224 -16998781 + MLT1F LTR MaLR 186 541 -1 910 269 98 12 chr20 49669243 49669570 -16998435 - L2 LINE L2 -144 3169 2815 468 308 83 0 chr20 49669635 49669804 -16998201 - MIR SINE MIR -33 229 47 334 318 128 0 chr20 49670409 49670557 -16997448 - MIR SINE MIR 0 262 96 441 0 0 0 chr20 49670558 49670607 -16997398 + (TTTTA)n Simple_repeat Simple_repeat 5 53 0 2866 80 10 10 chr20 49670607 49671006 -16996999 - L1PA10 LINE L1 -20 6148 5750 2300 107 7 0 chr20 49671015 49671314 -16996691 - AluSq SINE Alu -12 301 1 595 265 11 18 chr20 49671472 49671664 -16996341 + MIR SINE MIR 28 261 -1 403 264 28 9 chr20 49671658 49671764 -16996241 - MIR SINE MIR -111 151 44 * 407 283 53 97 chr20 49671946 49672193 -16995812 - L2 LINE L2 -36 3236 3001 1158 277 115 27 chr20 49672233 49672745 -16995260 + MLT1E LTR MaLR 36 592 -1 303 340 0 31 chr20 49672908 49673005 -16995000 + L2 LINE L2 3203 3296 -17 213 341 98 25 chr20 49673175 49673451 -16994554 - L2 LINE L2 -639 2675 2380 512 276 31 0 chr20 49673456 49673583 -16994422 + MIR SINE MIR 88 218 -44 472 152 160 32 chr20 49674307 49674432 -16993573 + MER20 DNA MER1_type 69 209 -10 2143 109 0 34 chr20 49674433 49674763 -16993242 + AluSq SINE Alu 3 322 0 575 255 43 67 chr20 49674800 49675008 -16992997 - L2 LINE L2 -1 3312 3110 530 269 129 0 chr20 49675106 49675277 -16992728 + MIR SINE MIR 62 254 -8 240 35 0 0 chr20 49675280 49675309 -16992696 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 1364 287 58 39 chr20 49675710 49676246 -16991759 - MLT1K LTR MaLR 0 588 43 3913 122 6 61 chr20 49676977 49677649 -16990356 - MER41B LTR ERV1 0 635 1 646 262 183 0 chr20 49677665 49677867 -16990138 - MIR SINE MIR -11 251 13 383 226 51 62 chr20 49678616 49678835 -16989170 - MLT1J LTR MaLR -3 508 250 225 231 31 31 chr20 49678912 49678977 -16989028 + MER46A DNA MER2_type 97 161 -75 321 132 0 0 chr20 49679060 49679121 -16988884 - MLT1J LTR MaLR -328 149 64 184 227 92 113 chr20 49679123 49679264 -16988741 - MER5B DNA MER1_type -12 166 29 569 150 160 89 chr20 49679365 49679578 -16988427 + MER46B DNA MER2_type 1 103 -133 1161 113 36 0 chr20 49679588 49679783 -16988222 + MER46B DNA MER2_type 35 236 0 1093 143 0 106 chr20 49680295 49680456 -16987549 + MER20 DNA MER1_type 1 129 -90 1499 120 27 13 chr20 49680456 49680549 -16987456 - MER30 DNA MER1_type 0 230 140 2060 94 3 81 chr20 49680549 49680869 -16987136 + AluSp SINE Alu 2 296 -17 1499 120 27 13 chr20 49680869 49681000 -16987005 - MER30 DNA MER1_type -90 140 3 1093 143 0 106 chr20 49681000 49681083 -16986922 + MER20 DNA MER1_type 129 219 0 683 304 75 0 chr20 49681100 49681327 -16986678 + MIR SINE MIR 1 244 -18 1652 229 61 78 chr20 49681710 49682229 -16985776 - L2 LINE L2 -289 3024 2505 2110 134 42 28 chr20 49682229 49682586 -16985419 + THE1B LTR MaLR 3 364 0 1652 229 61 78 chr20 49682586 49682658 -16985347 - L2 LINE L2 -808 2505 2433 1379 225 41 41 chr20 49682665 49683127 -16984878 + MLT1C LTR MaLR 6 467 0 278 139 42 97 chr20 49683127 49683199 -16984806 - L2 LINE L2 -879 2435 2368 238 265 58 82 chr20 49683313 49683651 -16984354 + L2 LINE L2 3009 3303 -10 345 290 105 31 chr20 49683706 49683868 -16984137 - MER5A DNA MER1_type -3 186 13 206 340 21 11 chr20 49684914 49685008 -16982997 + MIR3 SINE MIR 14 108 -100 246 330 11 22 chr20 49685111 49685202 -16982803 + MIR SINE MIR 21 110 -152 506 291 108 6 chr20 49685202 49685360 -16982645 - MLT1G1 LTR MaLR -42 553 380 383 299 6 0 chr20 49685360 49685608 -16982397 + (ATG)n Simple_repeat Simple_repeat 1 249 0 270 335 0 0 chr20 49685574 49685750 -16982255 + (CTG)n Simple_repeat Simple_repeat 3 178 0 * 389 292 0 17 chr20 49685794 49686055 -16981950 + (ATGGTG)n Simple_repeat Simple_repeat 1 256 0 394 312 121 13 chr20 49686118 49686275 -16981730 - MLT1G1 LTR MaLR -286 269 96 702 221 13 0 chr20 49686279 49686428 -16981577 - MER58 DNA MER1_type -2267 153 3 517 268 113 0 chr20 49686878 49687046 -16980959 + MIR SINE MIR 73 259 -3 1829 146 34 14 chr20 49687075 49687370 -16980635 + AluSq SINE Alu 1 301 -12 934 129 0 7 chr20 49687734 49687874 -16980131 - AluSg/x SINE Alu -5 307 169 402 109 0 0 chr20 49687874 49687929 -16980076 + Alu SINE Alu 9 63 -255 385 246 11 0 chr20 49688662 49688765 -16979240 + MIR SINE MIR 49 141 -67 1117 119 78 0 chr20 49689062 49689255 -16978750 + MER2 DNA MER2_type 3 210 -135 277 220 0 0 chr20 49689327 49689377 -16978628 + MER2 DNA MER2_type 296 345 0 311 297 19 84 chr20 49689503 49689658 -16978347 + MLT1L LTR MaLR 11 155 -460 1757 159 42 7 chr20 49689673 49689962 -16978043 - AluSx SINE Alu -13 299 1 791 218 104 0 chr20 49689963 49690156 -16977849 - MER58A DNA MER1_type -9 215 3 327 294 42 0 chr20 49690297 49690416 -16977589 - L2 LINE L2 -257 3056 2933 2011 135 7 0 chr20 49690425 49690736 -16977269 + AluSx SINE Alu 1 313 0 2085 127 0 22 chr20 49690952 49691267 -16976738 - AluSx SINE Alu 0 312 5 3012 253 77 30 chr20 49691385 49691602 -16976403 + MER45B DNA AcHobo 1 206 -1375 2323 109 0 6 chr20 49691602 49691913 -16976092 - AluSc SINE Alu 0 309 1 3012 253 77 30 chr20 49691913 49692689 -16975316 + MER45B DNA AcHobo 206 1040 0 287 204 171 23 chr20 49693667 49693755 -16974250 + MIR SINE MIR 49 149 -113 342 337 0 0 chr20 49694056 49694151 -16973854 + L2 LINE L2 3203 3297 -16 654 256 17 17 chr20 49694449 49694621 -16973384 + MIR SINE MIR 21 192 -70 467 193 67 73 chr20 49694739 49694889 -16973116 + MIR SINE MIR 44 192 -70 1978 131 0 53 chr20 49695117 49695438 -16972567 - AluJb SINE Alu -8 304 1 539 277 287 5 chr20 49695675 49696135 -16971870 + L2 LINE L2 2734 3313 0 1046 164 7 13 chr20 49696135 49696603 -16971402 + (TGGA)n Simple_repeat Simple_repeat 1 465 0 810 207 0 0 chr20 49696621 49696800 -16971205 + (TGGG)n Simple_repeat Simple_repeat 2 180 0 216 261 0 0 chr20 49696794 49696859 -16971146 + (TGGA)n Simple_repeat Simple_repeat 2 66 0 * 303 312 92 35 chr20 49696951 49697124 -16970881 + MIR SINE MIR 79 261 -1 487 284 123 5 chr20 49697237 49697448 -16970557 + MIR SINE MIR 8 243 -19 800 264 140 24 chr20 49697518 49697968 -16970037 + MLT1J LTR MaLR 1 502 -9 250 294 39 69 chr20 49697976 49698078 -16969927 - Charlie8 DNA MER1_type -2318 99 1 1901 129 43 13 chr20 49698174 49698476 -16969529 + AluSx SINE Alu 1 311 -1 234 235 50 76 chr20 49698650 49698769 -16969236 - MIR3 SINE MIR -32 176 61 625 222 24 0 chr20 49699330 49699456 -16968549 + MIR SINE MIR 59 187 -75 971 227 84 29 chr20 49699520 49699807 -16968198 - MLT1D LTR MaLR 0 505 198 243 61 0 0 chr20 49699807 49699840 -16968165 + (CA)n Simple_repeat Simple_repeat 1 33 0 971 227 84 29 chr20 49699840 49699860 -16968145 - MLT1D LTR MaLR -307 198 181 1171 168 4 60 chr20 49699951 49700201 -16967804 - MLT1D LTR MaLR -268 237 2 2367 100 0 0 chr20 49700247 49700536 -16967469 + AluSx SINE Alu 5 293 -19 843 252 75 4 chr20 49700798 49701052 -16966953 - MLT1J LTR MaLR -239 272 1 2190 147 0 9 chr20 49701610 49701950 -16966055 - MER1B DNA MER1_type 0 337 1 364 394 23 38 chr20 49702088 49702352 -16965653 + HAL1 LINE L1 798 1057 -1450 242 311 91 14 chr20 49702356 49702575 -16965430 + L1MEd LINE L1 913 1148 -4971 444 369 157 26 chr20 49702635 49703017 -16964988 + HAL1 LINE L1 1319 1750 -757 2358 99 0 0 chr20 49703022 49703315 -16964690 - AluY SINE Alu -17 294 2 932 224 36 56 chr20 49703536 49703786 -16964219 - MIR SINE MIR 0 262 18 321 329 31 22 chr20 49703790 49703970 -16964035 + HAL1b LINE L1 802 2371 -136 192 77 0 0 chr20 49705202 49705228 -16962777 + (CAT)n Simple_repeat Simple_repeat 1 26 0 224 302 31 21 chr20 49705241 49705337 -16962668 - MIR SINE MIR -15 247 151 1780 147 90 0 chr20 49706144 49706410 -16961595 + AluSx SINE Alu 1 290 -22 941 260 97 39 chr20 49706504 49706885 -16961120 - MLT1C LTR MaLR 0 467 65 465 363 62 10 chr20 49707048 49707357 -16960648 - L2 LINE L2 0 3313 2989 618 320 36 29 chr20 49707536 49707740 -16960265 - Charlie8 DNA MER1_type -64 277 69 2264 121 0 10 chr20 49707740 49708053 -16959952 + AluSx SINE Alu 1 310 -2 618 320 36 29 chr20 49708053 49708123 -16959882 - Charlie8 DNA MER1_type -272 69 1 25 0 0 0 chr20 49708526 49708551 -16959454 + AT_rich Low_complexity Low_complexity 1 25 0 2200 119 0 3 chr20 49708553 49708848 -16959157 - AluSx SINE Alu -18 294 1 238 279 74 121 chr20 49708867 49709165 -16958840 - L2 LINE L2 -1 3271 2988 237 273 13 39 chr20 49709538 49709615 -16958390 + MIR SINE MIR 119 193 -69 3231 151 31 66 chr20 49709715 49710431 -16957574 - LTR8 LTR ERV1 0 691 1 217 300 73 9 chr20 49711533 49711643 -16956362 + MIR SINE MIR 30 146 -116 192 311 81 0 chr20 49711850 49711924 -16956081 + L2 LINE L2 3234 3313 0 255 237 13 13 chr20 49711942 49712018 -16955987 + MIR3 SINE MIR 103 178 -30 308 293 129 34 chr20 49712455 49712602 -16955403 + MIR SINE MIR 12 172 -90 2163 169 150 0 chr20 49712672 49713111 -16954894 - MLT1D LTR MaLR 0 505 1 885 229 181 12 chr20 49713381 49713928 -16954077 - L2 LINE L2 -3 3310 2654 418 277 77 10 chr20 49713933 49714128 -16953877 - LTR33 LTR ERVL -9 512 305 295 261 174 7 chr20 49714205 49714343 -16953662 - LTR33 LTR ERVL -351 170 10 2245 124 103 8 chr20 49714546 49714933 -16953072 - MSTA LTR MaLR -4 424 1 530 271 28 11 chr20 49715250 49715427 -16952578 + (TATG)n Simple_repeat Simple_repeat 1 180 0 371 197 7 20 chr20 49715429 49715576 -16952429 + (TG)n Simple_repeat Simple_repeat 1 145 0 235 167 0 74 chr20 49715623 49715677 -16952328 - L2 LINE L2 -40 3273 3224 1083 98 0 0 chr20 49715694 49715827 -16952178 - FLAM_C SINE Alu -10 133 1 1042 236 132 40 chr20 49715963 49716386 -16951619 + MLT1C LTR MaLR 6 467 0 310 308 74 67 chr20 49716648 49717109 -16950896 - L2 LINE L2 -1237 2077 1614 190 346 150 8 chr20 49717342 49717469 -16950536 - L2 LINE L2 -547 2767 2623 1866 160 11 3 chr20 49717626 49717913 -16950092 + AluJo SINE Alu 1 289 -23 206 305 42 74 chr20 49717915 49718010 -16949995 + MIR SINE MIR 25 116 -146 1169 233 102 13 chr20 49718011 49718488 -16949517 - MLT1F1 LTR MaLR 0 567 43 930 174 0 0 chr20 49718488 49718637 -16949368 + FRAM SINE Alu 26 174 -2 447 250 73 37 chr20 49718637 49718773 -16949232 - MER97c DNA MER1_type? -947 143 3 2071 153 43 15 chr20 49718837 49719230 -16948775 - MSTB1 LTR MaLR -2 430 27 915 308 125 14 chr20 49719379 49719970 -16948035 - L2 LINE L2 -340 2974 2318 184 313 0 60 chr20 49719989 49720072 -16947933 + L2 LINE L2 3186 3263 -50 1852 153 55 30 chr20 49720074 49720440 -16947565 - MSTC LTR MaLR -1 427 53 1809 235 27 41 chr20 49720442 49720931 -16947074 + MLT1D LTR MaLR 3 484 -21 249 311 195 4 chr20 49720935 49721192 -16946813 - L2 LINE L2 -2918 396 91 239 329 151 25 chr20 49722037 49722429 -16945576 - L2 LINE L2 -1 3312 2872 667 258 156 42 chr20 49722476 49722925 -16945080 - L2 LINE L2 -542 2772 2273 213 200 55 0 chr20 49724055 49724110 -16943895 - MIR SINE MIR -92 170 113 192 266 202 0 chr20 49725230 49725324 -16942681 + MIR SINE MIR 78 190 -72 1588 133 125 19 chr20 49730024 49730280 -16937725 - AluJo SINE Alu -25 287 5 565 251 174 15 chr20 49731352 49731547 -16936458 + MIR SINE MIR 36 261 -1 655 242 121 5 chr20 49731641 49731864 -16936141 + MIR SINE MIR 8 256 -6 413 250 196 27 chr20 49733586 49733770 -16934235 - MIR SINE MIR 0 262 48 868 213 104 0 chr20 49734299 49734501 -16933504 - MER58A DNA MER1_type 0 224 2 519 17 0 0 chr20 49734503 49734563 -16933442 + (TA)n Simple_repeat Simple_repeat 1 60 0 1679 79 151 4 chr20 49735396 49735648 -16932357 - AluSg SINE Alu -21 289 1 517 255 227 25 chr20 49738305 49738627 -16929378 + L2 LINE L2 2190 2576 -738 187 385 0 0 chr20 49739252 49739348 -16928657 - MIR SINE MIR -119 143 48 246 325 60 0 chr20 49739473 49739556 -16928449 + MIR SINE MIR 113 200 -62 1668 128 124 8 chr20 49739556 49739821 -16928184 + AluSg1 SINE Alu 1 296 -13 1359 203 25 67 chr20 49742005 49742364 -16925641 + MLT1A2 LTR MaLR 31 374 0 473 286 85 11 chr20 49742716 49742905 -16925100 + MIR SINE MIR 40 242 -20 217 286 12 24 chr20 49742904 49742988 -16925017 + MIR SINE MIR 65 147 -115 * 474 266 0 0 chr20 49744120 49744229 -16923776 + L2 LINE L2 3203 3311 -2 1843 92 0 0 chr20 49744318 49744545 -16923460 - AluSq SINE Alu -86 227 1 415 280 68 0 chr20 49744545 49744677 -16923328 - MIR SINE MIR -58 204 64 437 273 139 83 chr20 49745467 49745900 -16922105 + L2 LINE L2 2857 3313 0 2437 87 3 0 chr20 49746700 49747000 -16921005 + AluSx SINE Alu 1 301 -11 596 275 40 19 chr20 49747003 49747260 -16920745 + L1ME3A LINE L1 4817 5094 -1052 573 250 21 0 chr20 49747270 49747410 -16920595 - MER5A DNA MER1_type -9 180 38 882 283 58 44 chr20 49747495 49747947 -16920058 + L1ME3A LINE L1 5440 5897 -273 1332 220 54 73 chr20 49747998 49748397 -16919608 + L1MC5 LINE L1 7196 7584 -377 2612 53 0 0 chr20 49748397 49748697 -16919308 + AluY SINE Alu 1 300 -11 1332 220 54 73 chr20 49748697 49748848 -16919157 + L1MC5 LINE L1 7584 7736 -225 246 206 0 49 chr20 49749009 49749111 -16918894 + GA-rich Low_complexity Low_complexity 4 100 0 454 269 237 0 chr20 49749231 49749450 -16918555 + L2 LINE L2 3024 3294 -19 228 211 0 0 chr20 49749454 49749492 -16918513 + (TGG)n Simple_repeat Simple_repeat 3 40 0 819 296 5 14 chr20 49749499 49749722 -16918283 - MIR SINE MIR -13 249 29 249 83 0 0 chr20 49749887 49749923 -16918082 + (CA)n Simple_repeat Simple_repeat 1 36 0 2293 122 0 0 chr20 49749985 49750296 -16917709 - AluSx SINE Alu -1 311 1 201 214 48 0 chr20 49750323 49750365 -16917640 + L2 LINE L2 3224 3267 -5 180 0 0 0 chr20 49751376 49751396 -16916609 + (GGAGAA)n Simple_repeat Simple_repeat 6 25 0 180 145 26 40 chr20 49751407 49751483 -16916522 + C-rich Low_complexity Low_complexity 5 79 0 1742 155 6 40 chr20 49751945 49752267 -16915738 + AluJo SINE Alu 1 311 -1 634 212 146 0 chr20 49752288 49752439 -16915566 + MIR SINE MIR 72 244 -18 182 207 52 35 chr20 49752535 49752593 -16915412 - L2 LINE L2 0 3313 3255 180 0 0 0 chr20 49752728 49752748 -16915257 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2361 100 7 0 chr20 49752875 49753174 -16914831 + AluSx SINE Alu 1 301 -11 1955 159 17 3 chr20 49753436 49753732 -16914273 + AluJo SINE Alu 1 300 -12 309 250 0 0 chr20 49753799 49753867 -16914138 - L1MC/D LINE L1 -2050 5758 5691 493 319 6 16 chr20 49754081 49754263 -16913742 - L1MC/D LINE L1 -2148 5660 5481 2105 132 0 7 chr20 49754449 49754744 -16913261 + AluSx SINE Alu 2 294 -18 411 284 155 7 chr20 49755123 49755278 -16912727 - MIR SINE MIR -2 260 83 537 323 109 19 chr20 49755859 49756271 -16911734 + L2 LINE L2 2864 3312 -1 1095 190 39 0 chr20 49756768 49756973 -16911032 + MER20 DNA MER1_type 3 215 -4 2272 109 0 3 chr20 49757119 49757422 -16910583 - AluSx SINE Alu 0 312 11 616 226 138 11 chr20 49757426 49757607 -16910398 + L2 LINE L2 3109 3312 -1 766 275 57 19 chr20 49757693 49758127 -16909878 + MLT1J LTR MaLR 24 510 -1 1868 188 61 145 chr20 49758437 49759373 -16908632 + L1MC5 LINE L1 6921 7777 -184 934 218 0 0 chr20 49759383 49759557 -16908448 + FAM SINE Alu 1 174 -1 352 259 15 38 chr20 49759617 49759748 -16908257 + L1MC5 LINE L1 7797 7924 -37 897 248 25 61 chr20 49760025 49760303 -16907702 - Charlie8 DNA MER1_type -2141 276 9 2075 132 3 16 chr20 49761474 49761784 -16906221 + AluJo SINE Alu 1 306 -6 231 345 9 26 chr20 49762889 49763005 -16905000 - MIR SINE MIR 0 262 149 886 185 20 91 chr20 49763339 49763593 -16904412 + MER106A DNA MER1_type 1 236 0 2201 128 3 0 chr20 49764665 49764971 -16903034 + AluSx SINE Alu 1 307 -5 456 284 71 0 chr20 49765003 49765144 -16902861 - MIR SINE MIR -56 206 56 381 257 158 11 chr20 49765145 49765328 -16902677 + L1ME3A LINE L1 5888 6097 -73 339 302 9 9 chr20 49766005 49766111 -16901894 + L2 LINE L2 2636 2741 -573 555 285 77 59 chr20 49766116 49766506 -16901499 + L2 LINE L2 2904 3300 -13 283 333 7 22 chr20 49766506 49766644 -16901361 + GA-rich Low_complexity Low_complexity 1 136 0 260 274 0 0 chr20 49768132 49768194 -16899811 - MER103 DNA DNA -49 117 56 1051 118 21 16 chr20 49769465 49769651 -16898354 + L1MA1 LINE L1 6116 6302 0 310 328 33 16 chr20 49770365 49770487 -16897518 - MIR3 SINE MIR -22 186 63 331 315 73 56 chr20 49771552 49771784 -16896221 + L2 LINE L2 3078 3313 0 508 242 48 8 chr20 49771850 49771974 -16896031 + MIR SINE MIR 117 245 -17 399 171 0 0 chr20 49772181 49772257 -16895748 + (TG)n Simple_repeat Simple_repeat 2 77 0 354 324 189 17 chr20 49772906 49773144 -16894861 + L2 LINE L2 3035 3313 0 420 234 196 19 chr20 49773420 49773578 -16894427 - MIR SINE MIR 0 262 77 207 146 0 49 chr20 49774089 49774130 -16893875 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 1403 156 54 30 chr20 49774445 49774740 -16893265 + L1PA16 LINE L1 5865 6166 0 23 0 0 0 chr20 49774860 49774883 -16893122 + AT_rich Low_complexity Low_complexity 1 23 0 2119 142 0 19 chr20 49774895 49775238 -16892767 + AluSx SINE Alu 1 337 0 514 234 62 14 chr20 49775768 49775913 -16892092 + MER103 DNA DNA 14 165 -1 236 311 74 8 chr20 49777226 49777348 -16890657 - MIR3 SINE MIR -4 204 75 651 292 32 9 chr20 49777681 49777900 -16890105 - MIR SINE MIR -19 243 20 373 301 66 30 chr20 49778226 49778392 -16889613 + MIR SINE MIR 27 198 -64 2276 105 7 3 chr20 49778423 49778727 -16889278 + AluSq SINE Alu 1 305 -8 2332 107 0 0 chr20 49779469 49779767 -16888238 + AluSx SINE Alu 1 298 -14 538 306 38 38 chr20 49779788 49779902 -16888103 + MIR SINE MIR 33 149 -113 2459 91 0 3 chr20 49779902 49780209 -16887796 + AluSq SINE Alu 1 306 -7 538 306 38 38 chr20 49780209 49780303 -16887702 + MIR SINE MIR 148 241 -21 2289 106 0 0 chr20 49780619 49780932 -16887073 + AluSx SINE Alu 2 314 0 34 55 0 0 chr20 49781135 49781190 -16886815 + AT_rich Low_complexity Low_complexity 1 55 0 497 328 121 23 chr20 49781456 49781853 -16886152 + L2 LINE L2 2836 3271 -1 2272 113 3 0 chr20 49782445 49782746 -16885259 - AluSx SINE Alu -6 306 5 545 319 47 17 chr20 49783412 49783900 -16884105 + L2 LINE L2 2563 3066 -247 782 169 39 45 chr20 49783900 49784078 -16883927 + MER53 DNA DNA 1 177 -12 302 282 126 0 chr20 49784182 49784285 -16883720 + L2 LINE L2 3193 3308 -5 354 339 17 23 chr20 49784472 49784649 -16883356 + MIR3 SINE MIR 33 208 0 183 250 0 0 chr20 49784786 49784826 -16883179 - L2 LINE L2 -11 3302 3263 23 54 0 0 chr20 49785538 49785575 -16882430 + AT_rich Low_complexity Low_complexity 1 37 0 465 246 70 21 chr20 49786350 49786492 -16881513 + MIR SINE MIR 53 201 -61 * 837 285 75 41 chr20 49786486 49786828 -16881177 - L2 LINE L2 0 3313 2953 2201 79 0 38 chr20 49786828 49787120 -16880885 + AluY SINE Alu 1 304 0 187 43 0 0 chr20 49787120 49787143 -16880862 + (GAAAA)n Simple_repeat Simple_repeat 2 150 0 837 285 75 41 chr20 49787143 49787313 -16880692 - L2 LINE L2 -360 2953 2790 24 77 0 0 chr20 49787313 49787365 -16880640 + AT_rich Low_complexity Low_complexity 1 52 0 903 259 40 8 chr20 49788124 49788375 -16879630 + MIR SINE MIR 1 259 -3 722 287 40 20 chr20 49788488 49788735 -16879270 - MIR SINE MIR -1 261 10 416 143 30 196 chr20 49788854 49788987 -16879018 + FLAM_A SINE Alu 14 124 -9 290 297 14 0 chr20 49789036 49789110 -16878895 - MIR SINE MIR -89 173 99 1031 193 34 5 chr20 49789816 49790023 -16877982 + MER20 DNA MER1_type 1 213 -6 2978 138 49 10 chr20 49790035 49790542 -16877463 + MER1A DNA MER1_type 1 527 0 222 266 0 0 chr20 49790748 49790827 -16877178 + L2 LINE L2 2006 2084 -1230 256 288 171 27 chr20 49791257 49791403 -16876602 - MIR SINE MIR -34 228 62 427 279 19 63 chr20 49791698 49791856 -16876149 - MER91B DNA MER1_type -28 162 12 352 254 113 7 chr20 49792275 49792417 -16875588 + L1MC4 LINE L1 5536 5692 -429 518 315 193 0 chr20 49792478 49792691 -16875314 - MIR SINE MIR -3 259 6 814 252 59 93 chr20 49793704 49794165 -16873840 + L2 LINE L2 2838 3282 -31 1116 128 0 0 chr20 49794193 49794265 -16873740 + (TGGG)n Simple_repeat Simple_repeat 1 251 0 1116 128 0 0 chr20 49794265 49794444 -16873561 + (TGGG)n Simple_repeat Simple_repeat 2 180 0 366 257 67 81 chr20 49794728 49794938 -16873067 - MIR SINE MIR -37 225 19 372 257 160 14 chr20 49796144 49796288 -16871717 + MER5A DNA MER1_type 25 189 0 1894 155 31 0 chr20 49796355 49796645 -16871360 - AluJb SINE Alu -13 299 1 1072 148 4 107 chr20 49796663 49796907 -16871098 - MER20 DNA MER1_type 0 219 1 204 189 57 38 chr20 49796909 49796962 -16871043 - MER5B DNA MER1_type -76 102 49 2210 81 3 55 chr20 49796985 49797295 -16870710 + AluSc SINE Alu 1 294 -15 364 266 84 14 chr20 49797401 49797544 -16870461 + MIR SINE MIR 24 176 -86 633 304 18 21 chr20 49797553 49797879 -16870126 + L1MC4 LINE L1 5677 6001 -2041 * 1245 220 38 10 chr20 49797615 49797929 -16870076 + L1MB7 LINE L1 5737 6059 -125 334 265 78 0 chr20 49797953 49798055 -16869950 + MIR SINE MIR 33 142 -120 2303 122 0 3 chr20 49798064 49798376 -16869629 + AluSx SINE Alu 1 311 -1 621 149 50 0 chr20 49798380 49798501 -16869504 + L1MB4 LINE L1 6049 6175 -5 425 177 34 0 chr20 49798803 49798903 -16869102 + MIR SINE MIR 105 209 -53 797 165 0 0 chr20 49799108 49799241 -16868764 - FLAM_C SINE Alu 0 133 1 350 240 15 103 chr20 49799263 49799467 -16868538 + MER5A DNA MER1_type 1 186 -3 2071 134 3 10 chr20 49800302 49800601 -16867404 + AluSx SINE Alu 1 297 -15 2245 103 0 35 chr20 49800621 49800931 -16867074 + AluSx SINE Alu 1 299 -13 21 0 0 0 chr20 49800987 49801008 -16866997 + AT_rich Low_complexity Low_complexity 1 21 0 526 256 110 0 chr20 49801055 49801219 -16866786 + MIR SINE MIR 77 258 -4 226 237 75 54 chr20 49802079 49802172 -16865833 + MIR SINE MIR 30 124 -84 815 224 49 0 chr20 49802779 49802962 -16865043 - MIR SINE MIR -69 193 2 200 288 76 0 chr20 49803311 49803377 -16864628 + MIR SINE MIR 61 131 -131 226 254 17 0 chr20 49803495 49803554 -16864451 - L2 LINE L2 -1 3312 3253 2149 96 29 0 chr20 49803574 49803854 -16864151 + AluSx SINE Alu 1 288 -24 673 291 137 24 chr20 49803862 49804402 -16863603 + L2 LINE L2 2705 3313 0 2390 97 0 0 chr20 49804523 49804821 -16863184 - AluSx SINE Alu -14 298 1 2651 228 74 39 chr20 49804989 49805258 -16862747 + L1ME1 LINE L1 4919 5177 -989 2428 96 0 0 chr20 49805258 49805559 -16862446 + AluSq SINE Alu 1 301 -12 2651 228 74 39 chr20 49805559 49805743 -16862262 + L1ME1 LINE L1 5177 5353 -813 2356 105 0 0 chr20 49805743 49806047 -16861958 + AluSq SINE Alu 1 304 -9 2651 228 74 39 chr20 49806047 49806792 -16861213 + L1ME1 LINE L1 5353 6163 -3 291 291 29 58 chr20 49807203 49807375 -16860630 - L2 LINE L2 -151 3121 2955 547 207 29 86 chr20 49807381 49807494 -16860511 + MER5B DNA MER1_type 8 109 -69 1729 196 21 0 chr20 49807494 49807785 -16860220 - AluJb SINE Alu -15 297 1 547 207 29 86 chr20 49807785 49807845 -16860160 + MER5B DNA MER1_type 109 171 -7 193 269 64 26 chr20 49807843 49807921 -16860084 - L2 LINE L2 -305 2967 2887 * 1433 218 77 28 chr20 49807999 49808426 -16859579 + MLT1C LTR MaLR 20 467 0 516 237 13 114 chr20 49810298 49810351 -16857654 + MER102b DNA MER1_type 129 186 -1242 638 102 0 0 chr20 49810351 49810439 -16857566 + L1PA10 LINE L1 6067 6154 -14 2077 120 0 17 chr20 49810439 49810749 -16857256 + AluSx SINE Alu 1 312 0 516 237 13 114 chr20 49810749 49810930 -16857075 + MER102b DNA MER1_type 184 340 -1 2247 104 50 0 chr20 49811092 49811389 -16856616 - AluSx SINE Alu 0 312 1 299 361 45 0 chr20 49811656 49811789 -16856216 + L2 LINE L2 3117 3255 -17 358 335 145 0 chr20 49811863 49812042 -16855963 + MIR SINE MIR 46 250 -12 998 270 16 7 chr20 49812916 49813224 -16854781 + L1MC4 LINE L1 7743 7992 -3 24 32 0 0 chr20 49813324 49813355 -16854650 + AT_rich Low_complexity Low_complexity 1 31 0 2270 112 7 7 chr20 49813432 49813737 -16854268 - AluSx SINE Alu -7 305 1 296 294 4 19 chr20 49814237 49814358 -16853647 + L1ME LINE L1 5700 5823 -298 1675 29 0 0 chr20 49814545 49814752 -16853253 - L1PA4 LINE L1 0 6155 5949 392 252 78 0 chr20 49814842 49814945 -16853060 + L1MC4a LINE L1 5192 5302 -844 496 271 90 43 chr20 49814945 49815200 -16852805 + L2 LINE L2 3047 3313 0 687 324 128 17 chr20 49815216 49815757 -16852248 + L1MC4a LINE L1 5315 5915 -1893 597 110 0 0 chr20 49815959 49816050 -16851955 + (TA)n Simple_repeat Simple_repeat 1 91 0 947 181 65 20 chr20 49816302 49816501 -16851504 - MER3 DNA MER1_type -1 208 1 670 328 130 3 chr20 49816988 49817372 -16850633 + L2 LINE L2 2542 2974 -340 274 268 14 14 chr20 49817431 49817502 -16850503 - MER63 DNA MER1_type -7 1054 984 * 686 193 30 37 chr20 49817500 49817635 -16850370 - MER63 DNA MER1_type -302 760 1 204 318 28 47 chr20 49817643 49817750 -16850255 + L2 LINE L2 3131 3235 -78 1729 177 10 16 chr20 49817805 49818110 -16849895 + AluJb SINE Alu 2 304 -8 443 267 36 38 chr20 49818176 49818354 -16849651 - MIR SINE MIR -61 147 6 2160 132 0 0 chr20 49818474 49818769 -16849236 + AluSx SINE Alu 1 295 -17 216 297 0 16 chr20 49818787 49818851 -16849154 + GA-rich Low_complexity Low_complexity 2 64 0 305 336 91 58 chr20 49819047 49819288 -16848717 + MIR SINE MIR 2 250 -12 364 300 42 0 chr20 49820380 49820500 -16847505 - MIR SINE MIR -67 195 71 1319 126 53 15 chr20 49820995 49821258 -16846747 - L1MA7 LINE L1 0 6291 6019 464 276 68 0 chr20 49821395 49821558 -16846447 + MER96 DNA MER1_type 1 174 -1 219 36 0 0 chr20 49822084 49822112 -16845893 + (CA)n Simple_repeat Simple_repeat 1 28 0 525 303 79 64 chr20 49822201 49822984 -16845021 + L2 LINE L2 2460 3263 -50 556 332 40 0 chr20 49824069 49824268 -16843737 + MIR SINE MIR 2 208 -54 977 257 143 30 chr20 49824423 49824440 -16843565 + L2 LINE L2 2761 2775 -538 1904 126 0 0 chr20 49824440 49824702 -16843303 + AluSx SINE Alu 44 305 -7 977 257 143 30 chr20 49824702 49825167 -16842838 + L2 LINE L2 2775 3312 -1 1041 126 0 23 chr20 49825803 49825978 -16842027 + L1PA10 LINE L1 5996 6166 -2 849 216 9 69 chr20 49826803 49827035 -16840970 - MER20 DNA MER1_type 0 219 2 613 282 37 22 chr20 49827082 49827355 -16840650 + L2 LINE L2 2481 2757 -557 2280 89 7 3 chr20 49827376 49827668 -16840337 + AluSx SINE Alu 1 293 -19 230 245 198 38 chr20 49827874 49827980 -16840025 + MLT1J LTR MaLR 385 507 -4 614 269 59 43 chr20 49828606 49828859 -16839146 - MIR SINE MIR 0 262 6 418 242 133 14 chr20 49828920 49829131 -16838874 + MER113 DNA MER1_type? 7 242 -279 579 191 0 0 chr20 49829149 49829243 -16838762 + FLAM_A SINE Alu 7 100 -42 34 24 0 0 chr20 49829243 49829284 -16838721 + AT_rich Low_complexity Low_complexity 1 41 0 347 254 64 9 chr20 49829654 49829764 -16838241 - Charlie4 DNA MER1_type -6 1955 1840 802 310 37 0 chr20 49829897 49830142 -16837863 + MER63B DNA MER1_type 1 254 -182 238 299 0 0 chr20 49830136 49830203 -16837802 + MER63B DNA MER1_type 370 436 0 * 480 35 0 0 chr20 49830331 49830389 -16837616 + (CA)n Simple_repeat Simple_repeat 2 59 0 531 316 80 13 chr20 49831569 49831806 -16836199 + MIR SINE MIR 2 254 -8 243 280 119 59 chr20 49832408 49832526 -16835479 + MIR SINE MIR 127 251 -11 1855 154 3 10 chr20 49833559 49833857 -16834148 - AluJb SINE Alu -16 296 1 555 275 95 25 chr20 49834527 49834811 -16833194 - MER102b DNA MER1_type -3 338 35 187 255 163 10 chr20 49834865 49834963 -16833042 + L2 LINE L2 2956 3068 -204 630 205 210 1 chr20 49835046 49835260 -16832745 - MIR SINE MIR 0 262 7 194 366 61 0 chr20 49835285 49835367 -16832638 + L2 LINE L2 3136 3222 -50 869 255 86 50 chr20 49836806 49836986 -16831019 - L2 LINE L2 -23 3290 3118 1982 133 39 0 chr20 49836986 49837265 -16830740 + AluSx SINE Alu 1 290 -22 869 255 86 50 chr20 49837265 49837801 -16830204 - L2 LINE L2 -195 3118 2547 2176 113 37 0 chr20 49837941 49838241 -16829764 + AluSx SINE Alu 1 311 -1 355 264 189 38 chr20 49838260 49838419 -16829586 + MIR SINE MIR 67 249 -13 415 294 57 36 chr20 49838446 49838640 -16829365 + MIR SINE MIR 51 248 -14 195 161 0 0 chr20 49838720 49838751 -16829254 + MIR3 SINE MIR 154 184 -24 21 36 0 0 chr20 49838767 49838795 -16829210 + AT_rich Low_complexity Low_complexity 1 28 0 279 303 91 15 chr20 49838942 49839074 -16828931 - MIR3 SINE MIR 0 208 67 552 126 16 68 chr20 49839126 49839316 -16828689 + C-rich Low_complexity Low_complexity 1 180 0 399 318 57 51 chr20 49839581 49839757 -16828248 - MER91B DNA MER1_type 0 190 14 853 289 68 41 chr20 49839871 49840282 -16827723 + L2 LINE L2 2835 3256 -57 1061 207 23 18 chr20 49840283 49840500 -16827505 - MER58A DNA MER1_type -5 219 2 274 346 12 0 chr20 49840542 49840623 -16827382 - MER5A DNA MER1_type -94 95 14 290 232 71 0 chr20 49840630 49840686 -16827319 + L2 LINE L2 3209 3268 -4 1651 180 3 37 chr20 49840806 49841106 -16826899 - AluJo SINE Alu -22 290 1 344 297 97 40 chr20 49841749 49841924 -16826081 - MIR SINE MIR -32 230 46 1957 138 0 40 chr20 49842329 49842490 -16825515 - AluSx SINE Alu -27 285 140 2300 82 4 0 chr20 49842490 49842771 -16825234 - AluSp SINE Alu -10 303 22 1957 138 0 40 chr20 49842771 49842906 -16825099 - AluSx SINE Alu -172 140 1 503 71 0 0 chr20 49843001 49843071 -16824934 + L1PB1 LINE L1 6082 6151 0 456 291 39 7 chr20 49843105 49843244 -16824761 + MIR SINE MIR 9 149 -59 2556 60 0 22 chr20 49843472 49843790 -16824215 - AluY SINE Alu 0 311 1 319 313 26 26 chr20 49843887 49844002 -16824003 + L1MC4 LINE L1 6589 6703 -1339 196 335 13 0 chr20 49844122 49844213 -16823792 + MIR SINE MIR 54 144 -79 278 339 18 18 chr20 49844418 49844527 -16823478 - MIR SINE MIR 0 262 154 * 365 253 47 16 chr20 49844511 49844633 -16823372 + MIR SINE MIR 33 165 -62 192 273 0 0 chr20 49844798 49844842 -16823163 + MIR SINE MIR 219 262 0 339 340 63 14 chr20 49845604 49845792 -16822213 + MIR SINE MIR 7 205 -57 480 332 9 35 chr20 49846188 49846414 -16821591 + MIR SINE MIR 2 221 -41 518 290 184 30 chr20 49847492 49847899 -16820106 + L2 LINE L2 2842 3311 -2 1153 147 0 0 chr20 49849083 49849253 -16818752 - FRAM SINE Alu -3 173 4 334 252 62 86 chr20 49849464 49849674 -16818331 + Charlie8 DNA MER1_type 73 277 -2140 929 301 168 18 chr20 49849917 49850544 -16817461 + L2 LINE L2 2256 2976 -338 236 278 153 0 chr20 49850597 49850669 -16817336 + L2 LINE L2 2990 3072 -241 349 306 19 0 chr20 49850863 49850971 -16817034 + L2 LINE L2 3142 3251 -21 219 214 0 0 chr20 49851278 49851320 -16816685 + (CAGAGA)n Simple_repeat Simple_repeat 1 42 0 1778 168 4 4 chr20 49851675 49851982 -16816023 + AluJo SINE Alu 9 315 0 520 286 200 0 chr20 49852436 49852611 -16815394 + MIR SINE MIR 53 262 0 497 261 29 22 chr20 49852597 49852735 -16815270 + L2 LINE L2 3169 3307 -6 * 313 320 39 52 chr20 49852827 49852980 -16815025 - L2 LINE L2 -4 3268 3118 2136 122 7 7 chr20 49853061 49853349 -16814656 + AluSx SINE Alu 1 288 -24 357 341 34 0 chr20 49853362 49853541 -16814464 + L1MEc LINE L1 115 299 -6097 247 309 9 18 chr20 49854031 49854141 -16813864 + L1MEc LINE L1 788 896 -5500 214 316 61 53 chr20 49854288 49854402 -16813603 - MER5B DNA MER1_type -60 118 4 536 310 53 25 chr20 49854667 49854912 -16813093 + L1ME4a LINE L1 5841 6092 -29 1778 136 62 77 chr20 49855522 49855778 -16812227 - MER7A DNA MER2_type -2692 346 88 1787 183 3 13 chr20 49855778 49856089 -16811916 + AluJb SINE Alu 1 308 -4 1778 136 62 77 chr20 49856089 49856105 -16811900 - MER7A DNA MER2_type -2950 88 73 2213 125 13 0 chr20 49856105 49856409 -16811596 + AluSx SINE Alu 1 308 -4 1778 136 62 77 chr20 49856409 49856488 -16811517 - MER7A DNA MER2_type -2965 73 1 1007 201 0 0 chr20 49857268 49857442 -16810563 - FRAM SINE Alu -9 167 1 254 86 0 0 chr20 49857463 49857498 -16810507 - Alu SINE Alu -268 35 1 2019 98 3 42 chr20 49857819 49858104 -16809901 + AluSg SINE Alu 18 291 -19 2240 119 0 7 chr20 49858104 49858414 -16809591 + AluSg SINE Alu 1 308 -2 438 287 81 15 chr20 49858761 49858897 -16809108 + MIR3 SINE MIR 16 160 -48 264 194 45 15 chr20 49858931 49858998 -16809007 + L2 LINE L2 3163 3231 -41 277 219 37 24 chr20 49859008 49859090 -16808915 + GA-rich Low_complexity Low_complexity 1 83 0 24 0 0 0 chr20 49859097 49859121 -16808884 + AT_rich Low_complexity Low_complexity 1 24 0 2287 104 13 0 chr20 49859121 49859428 -16808577 - AluSp SINE Alu -1 312 2 225 233 17 0 chr20 49859518 49859578 -16808427 - MER103 DNA DNA -75 91 31 2344 112 0 0 chr20 49859787 49860091 -16807914 - AluSx SINE Alu -8 304 1 799 106 0 45 chr20 49860475 49860607 -16807398 - MER2 DNA MER2_type -172 173 48 327 231 83 50 chr20 49860622 49860743 -16807262 - MIR SINE MIR -37 225 101 234 237 54 54 chr20 49860901 49860994 -16807011 - MIR SINE MIR -165 97 5 420 281 25 25 chr20 49861154 49861275 -16806730 + L2 LINE L2 3188 3308 -5 * 500 288 64 55 chr20 49861258 49861494 -16806511 - MIR SINE MIR -10 252 15 458 302 40 40 chr20 49862853 49863075 -16804930 + MER112 DNA MER1_type 39 260 0 292 229 57 0 chr20 49863240 49863310 -16804695 - MIR SINE MIR -64 144 71 2107 124 0 0 chr20 49863408 49863726 -16804279 + AluSx SINE Alu 1 318 0 591 286 143 49 chr20 49864000 49864693 -16803312 + L2 LINE L2 2370 3161 -111 782 202 58 63 chr20 49864693 49864916 -16803089 + MER58A DNA MER1_type 1 222 -2 591 286 143 49 chr20 49864916 49865038 -16802967 + L2 LINE L2 3161 3270 -2 264 273 40 74 chr20 49865307 49865376 -16802629 + L2 LINE L2 2831 2901 -412 1779 170 17 7 chr20 49865376 49865670 -16802335 - AluJb SINE Alu -14 298 2 264 273 40 74 chr20 49865670 49865776 -16802229 + L2 LINE L2 2901 3000 -313 237 301 36 12 chr20 49866015 49866098 -16801907 + L2 LINE L2 3188 3272 0 908 251 37 88 chr20 49866175 49866289 -16801716 + L1MC4a LINE L1 5555 5673 -2135 1422 177 90 38 chr20 49866289 49866577 -16801428 + AluJo SINE Alu 1 303 -9 908 251 37 88 chr20 49866577 49866837 -16801168 + L1MC4a LINE L1 5673 5910 -1898 435 327 6 6 chr20 49866854 49867013 -16800992 + (CA)n Simple_repeat Simple_repeat 2 160 0 412 305 24 36 chr20 49867239 49867406 -16800599 + MIR3 SINE MIR 37 201 -7 903 206 78 12 chr20 49868140 49868383 -16799622 + MER113 DNA MER1_type? 31 289 -232 540 215 15 8 chr20 49868411 49868541 -16799464 - L1ME1 LINE L1 -10 6156 6026 2358 100 3 6 chr20 49868628 49868939 -16799066 - AluSx SINE Alu -2 310 1 448 332 20 45 chr20 49869164 49869408 -16798597 + L2 LINE L2 2938 3175 -97 363 247 34 0 chr20 49869456 49869545 -16798460 - MIR SINE MIR 0 262 171 539 175 0 58 chr20 49869545 49869665 -16798340 - MER20 DNA MER1_type -104 115 3 858 229 73 8 chr20 49870572 49870817 -16797188 - MIR SINE MIR 0 262 2 313 297 59 8 chr20 49872585 49872703 -16795302 - MIR3 SINE MIR -37 171 48 2251 102 7 0 chr20 49872808 49873103 -16794902 - AluSq SINE Alu -16 297 1 965 248 133 3 chr20 49873111 49873478 -16794527 - L1ME3 LINE L1 -1 6161 5747 188 255 71 41 chr20 49874790 49874888 -16793117 + MIR SINE MIR 11 111 -151 225 0 0 0 chr20 49875369 49875394 -16792611 + (CA)n Simple_repeat Simple_repeat 2 26 0 310 355 116 0 chr20 49875417 49875555 -16792450 + L2 LINE L2 3116 3269 -3 392 279 207 38 chr20 49876354 49877037 -16790968 + L1 LINE L1 3381 4182 -1964 224 261 284 0 chr20 49877043 49877131 -16790874 + L2 LINE L2 3160 3272 0 513 341 28 0 chr20 49877218 49877397 -16790608 - MIR SINE MIR -56 206 23 553 244 9 0 chr20 49877485 49877600 -16790405 + MIR SINE MIR 88 203 -59 1661 172 3 49 chr20 49877943 49878269 -16789736 - AluJo SINE Alu -1 311 1 830 187 264 42 chr20 49878348 49878484 -16789521 + L1MC3 LINE L1 7119 7224 -561 2058 127 7 0 chr20 49878484 49878783 -16789222 - AluSq SINE Alu -12 301 1 830 187 264 42 chr20 49878783 49878930 -16789075 + L1MC3 LINE L1 7224 7465 -320 1005 178 16 5 chr20 49878935 49879126 -16788879 + L1MC3 LINE L1 7587 7779 -6 180 0 0 0 chr20 49879800 49879820 -16788185 + (GGCTG)n Simple_repeat Simple_repeat 1 20 0 22 35 0 0 chr20 49880991 49881020 -16786985 + GC_rich Low_complexity Low_complexity 1 29 0 231 215 31 0 chr20 49881214 49881279 -16786726 + G-rich Low_complexity Low_complexity 2 68 0 437 262 179 21 chr20 49881734 49882074 -16785931 - L2 LINE L2 -51 3262 2869 352 285 22 27 chr20 49882100 49882237 -16785768 - MER5A DNA MER1_type -43 146 1 505 253 123 7 chr20 49882345 49882446 -16785559 + MER5B DNA MER1_type 1 127 -51 2648 58 0 0 chr20 49882446 49882757 -16785248 - AluY SINE Alu 0 311 1 505 253 123 7 chr20 49882757 49882809 -16785196 + MER5B DNA MER1_type 127 172 -6 356 231 115 10 chr20 49882964 49883068 -16784937 - L2 LINE L2 0 3313 3199 866 164 22 55 chr20 49883125 49883308 -16784697 + MER5B DNA MER1_type 1 177 -1 353 251 78 89 chr20 49883726 49883917 -16784088 + MLT1K LTR MaLR 2 190 -398 879 121 26 17 chr20 49883981 49884336 -16783669 + (TGGA)n Simple_repeat Simple_repeat 1 358 0 633 305 69 26 chr20 49885243 49885760 -16782245 - L2 LINE L2 -194 3078 2542 1884 260 89 39 chr20 49886015 49886952 -16781053 + L2 LINE L2 2238 3242 -71 1029 132 21 26 chr20 49886952 49887142 -16780863 + MER53 DNA DNA 1 189 0 1884 260 89 39 chr20 49887142 49887218 -16780787 + L2 LINE L2 3242 3313 0 787 225 11 50 chr20 49887483 49887665 -16780340 + FAM SINE Alu 1 175 0 1210 112 0 0 chr20 49887720 49887913 -16780092 - AluSp SINE Alu 0 323 131 497 290 77 18 chr20 49888041 49888210 -16779795 + MIR3 SINE MIR 21 199 -9 758 206 5 88 chr20 49888247 49888441 -16779564 + MER45A DNA AcHobo 1 178 0 342 241 12 12 chr20 49888449 49888532 -16779473 - MER47A DNA MER2_type 0 366 284 496 143 42 15 chr20 49888532 49888773 -16779232 + AluJo SINE Alu 1 298 -14 2317 96 0 13 chr20 49888775 49889063 -16778942 + AluSq SINE Alu 1 302 -11 208 0 0 0 chr20 49889063 49889086 -16778919 + (TAA)n Simple_repeat Simple_repeat 2 180 0 2317 96 0 13 chr20 49889086 49889098 -16778907 + AluSq SINE Alu 302 313 0 1611 137 24 27 chr20 49889098 49889390 -16778615 - MER47A DNA MER2_type -75 291 1 971 182 78 21 chr20 49889626 49889868 -16778137 - MER96B DNA MER1_type? 0 417 162 1415 156 23 30 chr20 49889870 49890133 -16777872 - AluJb SINE Alu -8 304 44 28 48 0 0 chr20 49890174 49890216 -16777789 + AT_rich Low_complexity Low_complexity 1 42 0 2413 85 0 0 chr20 49890216 49890510 -16777495 + AluY SINE Alu 1 294 -17 708 126 0 3 chr20 49890536 49890750 -16777255 + AluJ SINE Alu 14 285 -27 320 200 40 40 chr20 49890750 49890825 -16777180 + L1MC4 LINE L1 6649 6723 -1319 817 231 60 70 chr20 49891211 49891279 -16776726 + MER102b DNA MER1_type 34 101 -1327 1386 112 33 5 chr20 49891279 49891493 -16776512 - L1PA10 LINE L1 0 6168 5949 817 231 60 70 chr20 49891493 49891722 -16776283 + MER102b DNA MER1_type 101 328 -13 2655 43 0 3 chr20 49891865 49892164 -16775841 + AluY SINE Alu 2 299 -12 268 329 29 29 chr20 49893042 49893179 -16774826 - MIR SINE MIR -43 219 83 1069 306 53 49 chr20 49893529 49893782 -16774223 + L2 LINE L2 2549 2799 -514 2504 71 0 3 chr20 49893782 49894077 -16773928 + AluY SINE Alu 1 294 -17 1069 306 53 49 chr20 49894077 49894343 -16773662 + L2 LINE L2 2799 3065 -248 1537 246 39 26 chr20 49894343 49894802 -16773203 + MLT1C LTR MaLR 3 467 0 1069 306 53 49 chr20 49894802 49895043 -16772962 + L2 LINE L2 3065 3304 -9 190 239 0 114 chr20 49895610 49895698 -16772307 + MIR SINE MIR 132 209 -53 288 291 261 0 chr20 49895785 49895950 -16772055 + MIR SINE MIR 49 256 -6 668 247 16 101 chr20 49896239 49896486 -16771519 - L2 LINE L2 0 3272 3047 1910 169 0 3 chr20 49896529 49896831 -16771174 + AluJo SINE Alu 1 301 -11 235 205 339 9 chr20 49897253 49897365 -16770640 - MIR SINE MIR -101 161 13 391 301 37 25 chr20 49897970 49898133 -16769872 + MIR SINE MIR 50 214 -48 227 284 206 10 chr20 49898184 49898286 -16769719 + MIR SINE MIR 23 144 -64 516 303 8 0 chr20 49898290 49898422 -16769583 - MIR SINE MIR -13 249 117 945 254 9 5 chr20 49898592 49898805 -16769200 - MIR SINE MIR -5 257 44 956 111 23 0 chr20 49899795 49899966 -16768039 + GA-rich Low_complexity Low_complexity 3 177 0 315 0 0 0 chr20 49899966 49900001 -16768004 + (CAAG)n Simple_repeat Simple_repeat 1 35 0 27 29 0 0 chr20 49900850 49900884 -16767121 + GC_rich Low_complexity Low_complexity 1 34 0 201 74 0 0 chr20 49901876 49901903 -16766102 + (GGA)n Simple_repeat Simple_repeat 1 27 0 256 279 58 12 chr20 49902800 49902886 -16765119 - MIR SINE MIR -79 183 94 454 210 0 0 chr20 49903012 49903093 -16764912 + MER81 DNA DNA 2 82 -32 1031 169 25 10 chr20 49903359 49903560 -16764445 - MER3 DNA MER1_type 0 209 6 377 305 15 8 chr20 49903630 49903761 -16764244 + MIR SINE MIR 117 248 -14 366 245 129 14 chr20 49903919 49904066 -16763939 - MIR SINE MIR -79 183 20 782 231 202 0 chr20 49905117 49905325 -16762680 - MIR SINE MIR 0 262 13 827 156 10 73 chr20 49905694 49905724 -16762281 - MER3 DNA MER1_type -29 180 150 2203 109 10 16 chr20 49905724 49906037 -16761968 + AluSx SINE Alu 2 312 0 827 156 10 73 chr20 49906037 49906198 -16761807 - MER3 DNA MER1_type -59 150 1 788 210 224 5 chr20 49906218 49906432 -16761573 + MIR SINE MIR 2 262 0 199 311 104 49 chr20 49906439 49906767 -16761238 + L2 LINE L2 2548 2893 -421 439 252 77 57 chr20 49906906 49906980 -16761025 + MIR SINE MIR 90 161 -101 2420 101 48 22 chr20 49906980 49907335 -16760670 + THE1B LTR MaLR 1 364 0 439 252 77 57 chr20 49907335 49907425 -16760580 + MIR SINE MIR 161 257 -5 1484 217 243 0 chr20 49907549 49907982 -16760023 + MLT1F LTR MaLR 5 542 0 1013 269 57 57 chr20 49908006 49908444 -16759561 + L2 LINE L2 2874 3311 -2 187 286 218 30 chr20 49908444 49908577 -16759428 + L2 LINE L2 3137 3294 -19 556 247 90 36 chr20 49908603 49908769 -16759236 - MIR SINE MIR -59 203 29 946 278 80 14 chr20 49909702 49910065 -16757940 - L2 LINE L2 -4 3309 2923 400 253 75 94 chr20 49910112 49910377 -16757628 - L2 LINE L2 -1 3271 3012 501 250 149 32 chr20 49910388 49910451 -16757554 - MIR SINE MIR -1 261 207 2745 80 36 6 chr20 49910451 49910815 -16757190 - THE1C LTR MaLR 0 375 1 501 250 149 32 chr20 49910815 49910939 -16757066 - MIR SINE MIR -55 207 52 871 290 48 10 chr20 49910939 49911232 -16756773 + MLT1J LTR MaLR 206 509 -2 2314 91 0 0 chr20 49911338 49911625 -16756380 + AluSg SINE Alu 1 287 -23 902 68 0 0 chr20 49911630 49911792 -16756213 + L1PA3 LINE L1 6015 6176 0 932 243 29 5 chr20 49911796 49912002 -16756003 + MIR SINE MIR 27 237 -25 363 308 10 0 chr20 49912921 49913025 -16754980 + MIR SINE MIR 48 152 -110 318 182 0 0 chr20 49913116 49913182 -16754823 + (TGAA)n Simple_repeat Simple_repeat 1 66 0 2079 198 86 27 chr20 49913201 49913727 -16754278 - MLT1F1 LTR MaLR 0 567 11 261 326 21 0 chr20 49913788 49913883 -16754122 + L1ME2 LINE L1 5886 5982 -182 266 198 34 0 chr20 49913953 49914020 -16753985 + L1ME2 LINE L1 6090 6161 -5 922 199 16 11 chr20 49914109 49914295 -16753710 + MER58A DNA MER1_type 29 215 -9 2457 76 0 3 chr20 49914296 49914598 -16753407 + AluSc SINE Alu 1 301 -8 219 186 0 0 chr20 49914997 49915040 -16752965 + CT-rich Low_complexity Low_complexity 2 44 0 377 304 81 14 chr20 49915396 49915544 -16752461 + MLT1K LTR MaLR 8 165 -423 675 257 72 81 chr20 49915573 49915908 -16752097 + MLT1K LTR MaLR 235 566 -22 426 295 101 30 chr20 49915976 49916213 -16751792 + MLT1K LTR MaLR 335 588 0 220 331 55 24 chr20 49916214 49916341 -16751664 + MIR SINE MIR 120 250 -12 387 298 186 33 chr20 49916589 49917018 -16750987 + MLT1K LTR MaLR 46 540 -48 824 168 43 27 chr20 49917023 49917208 -16750797 + MER53 DNA DNA 2 189 0 391 303 55 14 chr20 49917502 49917647 -16750358 - MIR SINE MIR -79 183 33 2141 130 0 3 chr20 49918626 49918925 -16749080 + AluSx SINE Alu 12 309 -3 1187 284 116 34 chr20 49919003 49919538 -16748467 + MLT1K LTR MaLR 10 588 0 1213 239 88 101 chr20 49920033 49920626 -16747379 + MLT1K LTR MaLR 4 588 0 539 282 73 96 chr20 49920719 49921074 -16746931 + L2 LINE L2 2926 3272 0 292 247 14 27 chr20 49922155 49922228 -16745777 + MLT1L LTR MaLR 170 241 -374 193 250 131 48 chr20 49922342 49922426 -16745579 - MIR SINE MIR -61 147 57 226 190 86 17 chr20 49922434 49922492 -16745513 + LTR67 LTR ERVL 2 63 -494 254 220 0 110 chr20 49922779 49922888 -16745117 + LTR67 LTR ERVL 460 556 -1 217 300 38 88 chr20 49922923 49923083 -16744922 - MIR SINE MIR -57 205 54 193 346 59 10 chr20 49923083 49923184 -16744821 + MIR SINE MIR 113 218 -44 603 259 65 95 chr20 49923526 49923896 -16744109 + L2 LINE L2 2837 3195 -118 372 320 90 0 chr20 49923867 49923989 -16744016 - L2 LINE L2 0 3313 3181 * 2138 73 0 7 chr20 49924078 49924350 -16743655 - AluY SINE Alu -7 304 35 309 284 39 63 chr20 49924398 49924525 -16743480 + L2 LINE L2 3173 3296 -17 305 297 109 0 chr20 49924901 49925032 -16742973 + MIR3 SINE MIR 10 152 -67 2332 107 0 3 chr20 49925033 49925342 -16742663 + AluSc SINE Alu 1 308 -1 324 151 0 0 chr20 49925445 49925518 -16742487 + L1ME LINE L1 5419 5491 -673 * 1296 188 74 24 chr20 49925502 49925895 -16742110 + L1ME LINE L1 5176 5586 -656 677 122 0 0 chr20 49925897 49926004 -16742001 - L1MB8 LINE L1 -2 6176 6070 710 253 37 6 chr20 49926010 49926207 -16741798 - L1M1 LINE L1 -587 5591 5385 230 184 0 20 chr20 49926171 49926220 -16741785 + L1ME LINE L1 5581 5628 -536 * 226 255 20 88 chr20 49926209 49926311 -16741694 + L1ME3 LINE L1 6055 6149 -13 * 1940 127 3 20 chr20 49926544 49926843 -16741162 + AluSx SINE Alu 1 294 -18 862 274 90 29 chr20 49926916 49927362 -16740643 + MLT1J LTR MaLR 5 477 -34 318 330 71 0 chr20 49927434 49927546 -16740459 + MIR SINE MIR 80 199 -63 2413 86 3 3 chr20 49927621 49927924 -16740081 - AluSc SINE Alu -6 303 1 293 80 0 230 chr20 49927949 49927991 -16740014 + L1MB3 LINE L1 6101 6151 -32 2421 97 0 0 chr20 49927991 49928302 -16739703 + AluSx SINE Alu 2 312 0 293 80 0 230 chr20 49928302 49928313 -16739692 + L1MB3 LINE L1 6151 6163 -20 1791 152 3 28 chr20 49928313 49928596 -16739409 + AluJo SINE Alu 21 296 -16 293 80 0 230 chr20 49928596 49928641 -16739364 + L1MB3 LINE L1 6163 6177 -6 188 296 56 0 chr20 49928664 49928718 -16739287 - L2 LINE L2 -13 3259 3203 1027 94 7 7 chr20 49928848 49928997 -16739008 - L1PA10 LINE L1 0 6168 6020 2150 125 0 26 chr20 49929318 49929629 -16738376 + AluSx SINE Alu 1 303 -9 214 318 47 0 chr20 49929891 49929976 -16738029 - MIR SINE MIR -126 136 48 228 265 83 15 chr20 49931122 49931254 -16736751 + L2 LINE L2 2807 2947 -325 2441 105 0 0 chr20 49931465 49931770 -16736235 + AluSx SINE Alu 1 305 -7 548 284 128 44 chr20 49931970 49932170 -16735835 + L2 LINE L2 2966 3205 -108 213 39 0 0 chr20 49932170 49932196 -16735809 + (CA)n Simple_repeat Simple_repeat 1 26 0 548 284 128 44 chr20 49932196 49932316 -16735689 + L2 LINE L2 3205 3313 0 192 77 0 0 chr20 49933437 49933463 -16734542 + (T)n Simple_repeat Simple_repeat 1 26 0 2024 123 35 0 chr20 49934069 49934353 -16733652 + AluSx SINE Alu 1 294 -18 503 207 200 7 chr20 49934355 49934495 -16733510 - MER20 DNA MER1_type -1 218 52 1674 159 22 7 chr20 49934562 49934859 -16733146 - AluJb SINE Alu 0 301 1 351 0 0 0 chr20 49939278 49939317 -16728688 + (CA)n Simple_repeat Simple_repeat 2 40 0 1854 184 3 3 chr20 49940097 49940407 -16727598 + AluJb SINE Alu 3 312 0 489 208 39 39 chr20 49941221 49941375 -16726630 - MER106B DNA MER1_type -4 1055 902 2234 104 0 7 chr20 49942235 49942549 -16725456 - AluSg SINE Alu 0 310 1 202 282 27 55 chr20 49942592 49942702 -16725303 + L2 LINE L2 3103 3209 -104 2073 137 3 0 chr20 49943807 49944107 -16723898 + AluJb SINE Alu 1 301 -11 2077 131 7 0 chr20 49944114 49944404 -16723601 + AluSx SINE Alu 12 303 -9 28 0 0 0 chr20 49944426 49944454 -16723551 + AT_rich Low_complexity Low_complexity 1 28 0 2000 95 44 4 chr20 49944458 49944731 -16723274 + AluSg SINE Alu 1 284 -26 1213 147 0 0 chr20 49944887 49945050 -16722955 + AluJ SINE Alu 3 165 -147 827 150 15 8 chr20 49945210 49945343 -16722662 + AluJ SINE Alu 144 277 -35 29 28 0 0 chr20 49945373 49945409 -16722596 + AT_rich Low_complexity Low_complexity 1 36 0 35 24 0 0 chr20 49945491 49945533 -16722472 + AT_rich Low_complexity Low_complexity 1 42 0 2369 109 0 0 chr20 49946232 49946534 -16721471 + AluSx SINE Alu 1 302 -10 197 234 16 0 chr20 49946906 49946970 -16721035 + GA-rich Low_complexity Low_complexity 3 67 0 1152 286 109 9 chr20 49947183 49947393 -16720612 - L2 LINE L2 -3 3310 3123 288 0 0 0 chr20 49947393 49947425 -16720580 + (TG)n Simple_repeat Simple_repeat 2 33 0 1152 286 109 9 chr20 49947425 49947672 -16720333 - L2 LINE L2 -190 3123 2807 765 244 31 58 chr20 49948703 49948928 -16719077 - MIR SINE MIR 0 262 44 240 300 83 42 chr20 49948967 49949087 -16718918 - MIR SINE MIR -19 243 119 384 308 0 39 chr20 49950583 49950713 -16717292 - MIR SINE MIR -79 183 59 2224 133 0 0 chr20 49950894 49951195 -16716810 - AluSx SINE Alu -11 301 1 264 313 172 8 chr20 49951525 49951653 -16716352 + MIR SINE MIR 96 244 -18 227 329 118 12 chr20 49951817 49951987 -16716018 - MIR SINE MIR -23 239 52 1823 192 0 0 chr20 49952759 49953071 -16714934 - AluSx SINE Alu 0 312 1 288 283 82 94 chr20 49953102 49953494 -16714511 + L1MC4 LINE L1 7383 7769 -273 388 208 212 57 chr20 49953605 49953817 -16714188 + L1MC4 LINE L1 7798 8042 0 2166 118 23 0 chr20 49954102 49954406 -16713599 - AluSx SINE Alu -1 311 1 2245 120 0 0 chr20 49954790 49955089 -16712916 - AluSx SINE Alu -13 299 1 2344 102 0 10 chr20 49955411 49955715 -16712290 - AluSx SINE Alu -11 301 1 469 301 34 63 chr20 49956354 49956416 -16711589 - MIR SINE MIR -15 247 185 2221 108 3 0 chr20 49956416 49956704 -16711301 + AluSx SINE Alu 9 297 -15 469 301 34 63 chr20 49956704 49956880 -16711125 - MIR SINE MIR -77 185 16 2131 119 7 3 chr20 49957752 49958047 -16709958 + AluSx SINE Alu 1 296 -16 2476 80 3 3 chr20 49958057 49958359 -16709646 + AluSp SINE Alu 1 302 -11 425 344 7 0 chr20 49958412 49958566 -16709439 - MIR SINE MIR -70 192 38 751 232 53 48 chr20 49958580 49958787 -16709218 - MER58A DNA MER1_type -16 208 1 2304 217 61 70 chr20 49958801 49959336 -16708669 + MER82 DNA MER2_type 1 530 -123 2369 94 3 0 chr20 49959336 49959634 -16708371 + AluSq SINE Alu 1 299 -14 2304 217 61 70 chr20 49959634 49959757 -16708248 + MER82 DNA MER2_type 530 653 0 306 338 23 23 chr20 49960830 49960963 -16707042 + L1ME LINE L1 5530 5662 -459 318 370 0 8 chr20 49961173 49961292 -16706713 - MIR3 SINE MIR -88 120 3 271 282 12 0 chr20 49961476 49961561 -16706444 - MIR SINE MIR -134 128 43 287 328 52 0 chr20 49961847 49961963 -16706042 + MIR3 SINE MIR 45 166 -42 2305 110 0 22 chr20 49961969 49962287 -16705718 + AluSx SINE Alu 1 311 -1 2171 126 7 0 chr20 49963195 49963497 -16704508 + AluSx SINE Alu 1 304 -8 321 225 147 8 chr20 49964015 49964144 -16703861 + MIR SINE MIR 29 175 -87 263 253 42 32 chr20 49964538 49964633 -16703372 - L2 LINE L2 -54 3259 3164 2208 135 0 3 chr20 49964677 49964988 -16703017 + AluSq SINE Alu 1 310 -3 791 140 7 37 chr20 49965001 49965137 -16702868 + FLAM_A SINE Alu 2 133 0 2427 103 0 0 chr20 49965245 49965556 -16702449 + AluSq SINE Alu 1 311 -2 698 310 59 22 chr20 49965741 49966064 -16701941 - L2 LINE L2 -170 3143 2809 245 331 21 28 chr20 49966395 49966537 -16701468 + Charlie8 DNA MER1_type 82 222 -2195 324 190 0 0 chr20 49966622 49966680 -16701325 + Charlie8 DNA MER1_type 2357 2414 -3 1702 256 58 26 chr20 49966803 49967369 -16700636 + MLT1E LTR MaLR 10 593 0 912 187 34 14 chr20 49967918 49968127 -16699878 - MER20 DNA MER1_type 0 219 7 369 298 97 0 chr20 49968214 49968338 -16699667 + MIR SINE MIR 12 147 -115 804 202 39 24 chr20 49968465 49968673 -16699332 + MER20 DNA MER1_type 8 218 -1 2168 121 7 0 chr20 49968891 49969181 -16698824 + AluSq SINE Alu 1 292 -21 1106 204 75 100 chr20 49969181 49969622 -16698383 + LTR47B LTR ERVL 14 443 0 1759 167 19 38 chr20 49970528 49970846 -16697159 - AluJb SINE Alu 0 312 1 664 208 0 0 chr20 49970968 49971098 -16696907 - MER20 DNA MER1_type -57 162 33 2433 88 0 3 chr20 49971316 49971624 -16696381 + AluSx SINE Alu 6 312 0 1902 192 0 0 chr20 49971934 49972246 -16695759 + AluJo SINE Alu 1 312 0 527 206 0 8 chr20 49972285 49972411 -16695594 + GA-rich Low_complexity Low_complexity 3 127 0 2304 98 7 0 chr20 49973045 49973340 -16694665 + AluSp SINE Alu 1 297 -16 845 267 127 27 chr20 49973431 49973910 -16694095 + MLT1E LTR MaLR 4 530 -63 1878 150 4 0 chr20 49973931 49974198 -16693807 + AluJb SINE Alu 6 273 -39 617 188 19 6 chr20 49974199 49974359 -16693646 + GA-rich Low_complexity Low_complexity 1 162 0 2062 176 118 5 chr20 49974445 49974878 -16693127 - MER44D DNA MER2_type -42 563 27 281 220 23 4 chr20 49974863 49974949 -16693056 + MLT1F1 LTR MaLR 506 565 -2 * 613 261 114 14 chr20 49975036 49975291 -16692714 + MIR SINE MIR 21 238 -15 1984 124 0 4 chr20 49975302 49975575 -16692430 + AluSx SINE Alu 25 296 -16 207 0 0 0 chr20 49975777 49975800 -16692205 + (A)n Simple_repeat Simple_repeat 1 23 0 216 306 94 44 chr20 49975843 49976023 -16691982 - L2 LINE L2 -23 3290 3102 3026 124 15 11 chr20 49976176 49976542 -16691463 - L1PB1 LINE L1 0 6151 5781 477 0 0 0 chr20 49976542 49976595 -16691410 + (TA)n Simple_repeat Simple_repeat 1 53 0 3026 124 15 11 chr20 49976595 49976704 -16691301 - L1PB1 LINE L1 -370 5781 5674 180 244 24 0 chr20 49976890 49976931 -16691074 + MER5B DNA MER1_type 102 143 -35 1168 178 0 0 chr20 49977055 49977246 -16690759 + AluJo SINE Alu 5 195 -117 29 28 0 0 chr20 49977263 49977299 -16690706 + AT_rich Low_complexity Low_complexity 1 36 0 656 148 66 0 chr20 49977397 49977519 -16690486 + L1MB5 LINE L1 6045 6174 0 2234 93 4 0 chr20 49978274 49978553 -16689452 + AluSx SINE Alu 1 280 -32 941 215 39 0 chr20 49978739 49978944 -16689061 + MER20 DNA MER1_type 1 213 -6 335 235 122 0 chr20 49978955 49979053 -16688952 - MIR SINE MIR -126 136 27 573 289 50 29 chr20 49979171 49979413 -16688592 - MER102b DNA MER1_type -3 338 92 1303 213 14 44 chr20 49979413 49979555 -16688450 + AluJb SINE Alu 1 131 -181 2133 123 0 0 chr20 49979555 49979839 -16688166 + AluSx SINE Alu 9 292 -20 1303 213 14 44 chr20 49979839 49979992 -16688013 + AluJb SINE Alu 131 287 -25 2415 77 0 49 chr20 49980003 49980328 -16687677 + AluSq SINE Alu 1 309 -4 434 209 11 112 chr20 49980564 49980607 -16687398 - MLT1D LTR MaLR 0 505 459 242 29 29 0 chr20 49980607 49980642 -16687363 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 2016 131 3 14 chr20 49980645 49980928 -16687077 - AluSx SINE Alu -32 280 1 434 209 11 112 chr20 49980928 49981067 -16686938 - MLT1D LTR MaLR -48 457 338 1004 170 0 0 chr20 49981067 49981226 -16686779 + AluJb SINE Alu 154 312 0 216 283 20 71 chr20 49981428 49981527 -16686478 + MIR3 SINE MIR 111 204 -4 1956 154 19 48 chr20 49981849 49982225 -16685780 + MLT1A1 LTR MaLR 1 365 0 2125 142 3 0 chr20 49982324 49982635 -16685370 + AluSx SINE Alu 1 312 0 2291 73 33 26 chr20 49982738 49983040 -16684965 - AluY SINE Alu -7 304 1 2063 80 53 0 chr20 49983713 49984024 -16683981 + AluSx SINE Alu 6 330 0 365 311 169 8 chr20 49985003 49985257 -16682748 - MER102a DNA MER1_type 0 330 36 1938 125 14 20 chr20 49985306 49985603 -16682402 + AluSx SINE Alu 2 296 -16 2280 118 0 6 chr20 49985737 49986051 -16681954 + AluSx SINE Alu 1 312 0 1226 148 0 0 chr20 49986051 49986227 -16681778 + AluSg/x SINE Alu 134 309 -3 384 312 35 17 chr20 49986853 49987020 -16680985 + L1MA4 LINE L1 5659 5767 -354 1685 192 6 25 chr20 49987020 49987338 -16680667 + AluJo SINE Alu 1 312 0 384 312 35 17 chr20 49987338 49987392 -16680613 + L1MA4 LINE L1 5767 5819 -302 23 0 0 0 chr20 49987548 49987571 -16680434 + AT_rich Low_complexity Low_complexity 1 23 0 226 315 161 14 chr20 49987767 49987910 -16680095 + MIR SINE MIR 7 170 -92 217 280 0 0 chr20 49987914 49987964 -16680041 + L2 LINE L2 3211 3260 -12 250 315 109 0 chr20 49988011 49988103 -16679902 - MIR3 SINE MIR -28 180 79 2278 101 7 0 chr20 49988103 49988401 -16679604 + AluSx SINE Alu 1 300 -12 27 22 0 22 chr20 49988697 49988724 -16679281 + AT_rich Low_complexity Low_complexity 1 28 -16 2451 98 0 0 chr20 49988724 49989029 -16678976 + AluSg SINE Alu 1 305 -5 27 22 0 22 chr20 49989029 49989046 -16678959 + AT_rich Low_complexity Low_complexity 28 44 0 222 37 0 0 chr20 49989366 49989393 -16678612 + (CA)n Simple_repeat Simple_repeat 1 27 0 462 66 26 40 chr20 49989444 49989520 -16678485 - Alu SINE Alu -8 304 230 34 42 0 0 chr20 49989654 49989702 -16678303 + AT_rich Low_complexity Low_complexity 1 48 0 318 314 121 67 chr20 49989702 49990075 -16677930 + L1ME4a LINE L1 5681 6073 -48 2066 114 40 33 chr20 49990117 49990416 -16677589 + AluSx SINE Alu 1 301 -11 2357 77 0 7 chr20 49991297 49991594 -16676411 + AluY SINE Alu 1 295 -16 1988 125 4 4 chr20 49991976 49992248 -16675757 + AluSx SINE Alu 2 273 -39 490 120 80 0 chr20 49992255 49992330 -16675675 + AluS SINE Alu 2 82 -231 987 181 0 18 chr20 49993049 49993220 -16674785 + FAM SINE Alu 1 168 -7 541 251 61 61 chr20 49993506 49993753 -16674252 + L1ME4a LINE L1 5687 5933 -188 357 179 3 9 chr20 49993758 49993841 -16674164 + AluJ/FLAM SINE Alu 1 63 -239 258 134 119 45 chr20 49993826 49993893 -16674112 + AluS SINE Alu 227 298 -4 * 3668 200 14 40 chr20 49993893 49994747 -16673258 + L1MB8 LINE L1 5284 6114 -64 2165 117 3 3 chr20 49994747 49995046 -16672959 + AluSq SINE Alu 8 306 -7 3668 200 14 40 chr20 49995046 49995106 -16672899 + L1MB8 LINE L1 6114 6174 -4 484 163 133 67 chr20 49996010 49996145 -16671860 - MER20 DNA MER1_type -75 144 1 1508 69 32 0 chr20 49996648 49996836 -16671169 + AluSq SINE Alu 1 194 -119 2502 73 0 3 chr20 49996987 49997290 -16670715 - AluSx SINE Alu -10 302 1 931 291 117 37 chr20 49997445 49997882 -16670123 + L2 LINE L2 2842 3313 0 1863 148 3 26 chr20 49999838 50000141 -16667864 - AluJb SINE Alu -16 296 1 678 171 128 18 chr20 50000403 50000567 -16667438 + MER20 DNA MER1_type 7 188 -31 378 206 63 91 chr20 50000658 50000737 -16667268 - MER96B DNA MER1_type? -238 179 99 2279 102 10 0 chr20 50000737 50001031 -16666974 + AluSx SINE Alu 2 298 -14 378 206 63 91 chr20 50001031 50001126 -16666879 - MER96B DNA MER1_type? -318 99 10 2419 69 3 3 chr20 50001260 50001551 -16666454 + AluSq SINE Alu 2 292 -21 26 0 0 0 chr20 50001609 50001635 -16666370 + AT_rich Low_complexity Low_complexity 1 26 0 2514 70 0 0 chr20 50001992 50002291 -16665714 + AluY SINE Alu 10 308 -3 1021 123 20 0 chr20 50002503 50002649 -16665356 - AluSg/x SINE Alu -27 283 135 1900 171 3 13 chr20 50002775 50003090 -16664915 + AluJb SINE Alu 1 312 0 2309 77 3 39 chr20 50003189 50003500 -16664505 - AluSg SINE Alu -10 300 1 1469 218 37 8 chr20 50003527 50003880 -16664125 + L1MB7 LINE L1 5800 6162 -22 2223 105 0 20 chr20 50003908 50004212 -16663793 + AluSx SINE Alu 2 299 -13 687 264 197 23 chr20 50004290 50004676 -16663329 - Charlie7 DNA MER1_type -2136 476 24 228 330 22 11 chr20 50004724 50004815 -16663190 - MER5A DNA MER1_type 0 189 98 2414 103 3 0 chr20 50004869 50005180 -16662825 + AluSx SINE Alu 1 312 0 236 283 43 11 chr20 50005271 50005363 -16662642 + L1ME1 LINE L1 6068 6162 -4 1882 131 3 59 chr20 50006240 50006546 -16661459 + AluJo SINE Alu 1 289 -23 180 235 0 0 chr20 50006550 50006618 -16661387 + G-rich Low_complexity Low_complexity 1 68 0 207 222 0 22 chr20 50006619 50006664 -16661341 + GA-rich Low_complexity Low_complexity 2 45 0 273 278 20 162 chr20 50007576 50007774 -16660231 + MER5B DNA MER1_type 9 178 0 854 125 54 43 chr20 50008238 50008422 -16659583 + L1MB8 LINE L1 5993 6178 0 230 239 119 0 chr20 50009102 50009169 -16658836 - MIR3 SINE MIR -133 75 1 552 296 59 0 chr20 50009228 50009414 -16658591 + MIR SINE MIR 38 234 -28 1615 149 64 88 chr20 50010047 50010275 -16657730 - L1MB3 LINE L1 0 6183 5968 2194 122 0 3 chr20 50010275 50010570 -16657435 - AluSx SINE Alu -18 294 1 1615 149 64 88 chr20 50010570 50010763 -16657242 - L1MB3 LINE L1 -215 5968 5772 2272 99 0 0 chr20 50011562 50011868 -16656137 + AluSx SINE Alu 1 306 0 582 247 7 0 chr20 50011935 50012081 -16655924 - MER117 DNA MER1_type -49 148 2 2227 126 0 0 chr20 50012242 50012544 -16655461 + AluSq SINE Alu 5 306 -7 237 147 73 53 chr20 50012843 50012907 -16655098 + AluSp/q SINE Alu 203 258 -45 2111 112 37 0 chr20 50013288 50013582 -16654423 - AluSx SINE Alu -7 305 1 21 0 0 0 chr20 50013588 50013609 -16654396 + AT_rich Low_complexity Low_complexity 1 21 0 292 312 121 12 chr20 50013868 50014041 -16653964 + MIR SINE MIR 51 242 -20 2151 140 0 10 chr20 50014069 50014383 -16653622 + AluSx SINE Alu 2 312 0 221 298 33 8 chr20 50014386 50014507 -16653498 + (TA)n Simple_repeat Simple_repeat 2 125 0 198 103 0 0 chr20 50014688 50014717 -16653288 + (A)n Simple_repeat Simple_repeat 1 29 0 1832 140 6 63 chr20 50014776 50014953 -16653052 - AluSx SINE Alu -15 297 144 2201 125 0 0 chr20 50014953 50015249 -16652756 - AluSq SINE Alu -17 296 1 1832 140 6 63 chr20 50015249 50015386 -16652619 - AluSx SINE Alu -168 144 1 2310 117 0 19 chr20 50015388 50015704 -16652301 - AluJo SINE Alu -2 310 1 298 278 0 14 chr20 50016373 50016445 -16651560 + L1ME3A LINE L1 5527 5597 -2211 521 301 38 41 chr20 50017415 50017512 -16650493 + MER102b DNA MER1_type 43 139 -1289 2295 99 7 13 chr20 50017512 50017816 -16650189 + AluSx SINE Alu 1 302 -10 521 301 38 41 chr20 50017816 50017984 -16650021 + MER102b DNA MER1_type 139 307 -34 420 273 0 36 chr20 50018219 50018329 -16649676 + MER5C DNA MER1_type 14 119 -205 2250 104 13 0 chr20 50018418 50018717 -16649288 + AluSx SINE Alu 1 303 -9 222 196 0 54 chr20 50018793 50018849 -16649156 + MER5C DNA MER1_type 272 324 0 228 139 20 77 chr20 50019587 50019642 -16648363 + MIR SINE MIR 84 143 -65 2420 94 10 0 chr20 50019894 50020192 -16647813 - AluSx SINE Alu -11 301 1 567 229 13 88 chr20 50020410 50020566 -16647439 + L1ME3A LINE L1 5961 6096 -74 1052 138 6 12 chr20 50020566 50020733 -16647272 + L1PA15 LINE L1 6000 6165 0 567 229 13 88 chr20 50020733 50020803 -16647202 + L1ME3A LINE L1 6096 6170 0 2359 98 0 7 chr20 50021048 50021355 -16646650 - AluSq SINE Alu 0 313 9 1643 115 4 4 chr20 50021356 50021582 -16646423 + AluSp SINE Alu 78 303 -10 1599 181 18 11 chr20 50021582 50021722 -16646283 - AluJb SINE Alu -34 278 141 2189 91 17 0 chr20 50021722 50021901 -16646104 - AluY SINE Alu 0 312 124 216 0 0 0 chr20 50021901 50021925 -16646080 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2189 91 17 0 chr20 50021925 50022052 -16645953 - AluY SINE Alu -188 124 1 1599 181 18 11 chr20 50022052 50022186 -16645819 - AluJb SINE Alu -171 141 1 330 339 27 9 chr20 50022339 50022451 -16645554 + L1MC/D LINE L1 5018 5131 -1015 1377 161 0 5 chr20 50022456 50022667 -16645338 + AluJb SINE Alu 85 294 -18 404 267 75 98 chr20 50022768 50022885 -16645120 + L1MC/D LINE L1 5255 5373 -2435 2510 81 0 0 chr20 50022885 50023194 -16644811 + AluY SINE Alu 1 309 -2 2369 89 0 6 chr20 50023198 50023511 -16644494 + AluY SINE Alu 1 311 0 404 267 75 98 chr20 50023511 50023643 -16644362 + L1MC/D LINE L1 5376 5503 -2305 2078 113 7 13 chr20 50023762 50024064 -16643941 + AluSq SINE Alu 14 313 0 6213 49 8 4 chr20 50024070 50024847 -16643158 + L1PA5 LINE L1 5374 6153 -1 2115 100 0 0 chr20 50025123 50025394 -16642611 + AluSx SINE Alu 1 271 -41 1845 147 25 11 chr20 50025961 50026246 -16641759 + AluJo SINE Alu 6 294 -18 270 0 0 0 chr20 50026246 50026276 -16641729 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 868 208 9 57 chr20 50026474 50026686 -16641319 + MIR SINE MIR 32 233 -29 2287 132 3 0 chr20 50026781 50027092 -16640913 + AluSx SINE Alu 1 312 0 1109 84 0 107 chr20 50028013 50028191 -16639814 - AluSg/x SINE Alu -17 295 137 2417 93 7 3 chr20 50028299 50028609 -16639396 + AluSx SINE Alu 1 311 -1 2372 82 0 0 chr20 50028609 50028902 -16639103 + AluY SINE Alu 1 293 -18 2365 97 0 7 chr20 50029655 50029955 -16638050 + AluSx SINE Alu 1 298 -14 204 216 0 0 chr20 50029956 50029993 -16638012 - L2 LINE L2 -4 3309 3273 4081 160 19 3 chr20 50030027 50030746 -16637259 + L1MB3 LINE L1 5446 6176 -7 2231 120 0 0 chr20 50030998 50031298 -16636707 + AluSx SINE Alu 9 308 -4 263 325 45 77 chr20 50031777 50032008 -16635997 - L2 LINE L2 -339 2975 2753 865 213 6 0 chr20 50032008 50032172 -16635833 - FAM SINE Alu -10 165 1 263 325 45 77 chr20 50032172 50032226 -16635779 - L2 LINE L2 -561 2753 2699 326 335 86 20 chr20 50032731 50032883 -16635122 + MIR SINE MIR 31 192 -70 789 253 21 5 chr20 50032945 50033139 -16634866 + MIR SINE MIR 23 219 -43 2036 93 93 0 chr20 50033677 50033955 -16634050 + AluSx SINE Alu 1 304 -8 255 93 0 0 chr20 50035706 50035749 -16632256 + (TG)n Simple_repeat Simple_repeat 2 44 0 512 283 104 5 chr20 50036454 50036666 -16631339 - MIR SINE MIR 0 262 30 1677 166 29 7 chr20 50036712 50036990 -16631015 + AluJb SINE Alu 1 284 -28 319 123 123 0 chr20 50036999 50037056 -16630949 - L2 LINE L2 -16 3256 3193 2189 106 30 10 chr20 50037527 50037828 -16630177 + AluSq SINE Alu 1 307 -6 22 70 0 0 chr20 50037889 50037932 -16630073 + AT_rich Low_complexity Low_complexity 1 43 0 2436 81 0 0 chr20 50038113 50038411 -16629594 - AluSg SINE Alu -12 298 1 1714 198 0 3 chr20 50038709 50039012 -16628993 + AluJo SINE Alu 1 302 -10 2388 82 3 0 chr20 50039020 50039314 -16628691 + AluSp SINE Alu 2 296 -17 22 0 0 0 chr20 50039869 50039891 -16628114 + AT_rich Low_complexity Low_complexity 1 22 0 724 135 54 0 chr20 50040356 50040467 -16627538 + FLAM_C SINE Alu 2 118 -25 2193 96 27 7 chr20 50040488 50040781 -16627224 + AluSg SINE Alu 1 299 -11 408 71 0 0 chr20 50040824 50040880 -16627125 + (TG)n Simple_repeat Simple_repeat 2 57 0 382 75 50 138 chr20 50041617 50041697 -16626308 + MER45A DNA AcHobo 104 176 -2 23 0 0 0 chr20 50042214 50042237 -16625768 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr20 50042712 50042733 -16625272 + AT_rich Low_complexity Low_complexity 1 21 0 2283 93 3 0 chr20 50042969 50043281 -16624724 + AluSp SINE Alu 1 313 0 189 240 0 20 chr20 50044673 50044723 -16623282 + MIR SINE MIR 189 237 -25 219 351 11 11 chr20 50044761 50044855 -16623150 + MIR SINE MIR 46 139 -123 1518 215 38 0 chr20 50044949 50045242 -16622763 + AluJb SINE Alu 1 304 -8 838 213 19 0 chr20 50045592 50045752 -16622253 + MER45A DNA AcHobo 16 178 0 303 294 134 0 chr20 50045934 50046053 -16621952 - MIR SINE MIR -38 224 90 226 319 109 17 chr20 50046185 50046304 -16621701 + L2 LINE L2 3106 3235 -37 734 221 21 0 chr20 50046349 50046494 -16621511 - FRAM SINE Alu -15 151 4 842 129 0 50 chr20 50046640 50046779 -16621226 + FLAM_C SINE Alu 1 132 -1 1911 131 0 3 chr20 50046923 50047237 -16620768 + AluSx SINE Alu 1 313 0 1269 208 42 53 chr20 50047237 50047670 -16620335 + L1MC4 LINE L1 7489 7916 -126 1959 99 0 0 chr20 50047703 50047966 -16620039 + AluSx SINE Alu 1 263 -49 1041 172 19 19 chr20 50048000 50048209 -16619796 + AluJb SINE Alu 86 294 -18 377 254 10 5 chr20 50048210 50048331 -16619674 + L1MC4 LINE L1 7900 7992 -3 2225 97 0 3 chr20 50048490 50048790 -16619215 + AluSq SINE Alu 1 299 -14 1510 112 5 5 chr20 50050323 50050546 -16617459 - AluSg/x SINE Alu -8 304 82 * 2344 60 0 7 chr20 50050545 50050844 -16617161 - AluY SINE Alu -14 297 1 611 216 133 33 chr20 50051898 50052079 -16615926 - MIR SINE MIR -23 239 41 2113 69 18 0 chr20 50052379 50052654 -16615351 - AluSc SINE Alu -8 301 22 1818 132 0 42 chr20 50052656 50052847 -16615158 - AluJb SINE Alu -15 297 100 192 77 0 0 chr20 50052847 50052873 -16615132 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1926 72 53 0 chr20 50052873 50053137 -16614868 - AluSx SINE Alu -33 279 2 1818 132 0 42 chr20 50053137 50053254 -16614751 - AluJb SINE Alu -210 102 1 357 133 67 0 chr20 50054135 50054195 -16613810 - AluSg/x SINE Alu -155 145 82 271 130 37 19 chr20 50054441 50054495 -16613510 + L1ME2 LINE L1 5940 5994 -170 238 118 0 0 chr20 50054530 50054564 -16613441 + MER3 DNA MER1_type 16 49 -160 416 257 0 0 chr20 50054564 50054673 -16613332 + L1ME2 LINE L1 6055 6163 -1 997 98 0 0 chr20 50054785 50054918 -16613087 + FLAM_C SINE Alu 1 133 -10 899 164 6 18 chr20 50054962 50055127 -16612878 + AluSg/x SINE Alu 121 283 -29 481 300 100 35 chr20 50055197 50055373 -16612632 - MIR SINE MIR -10 252 56 2047 97 17 3 chr20 50055373 50055662 -16612343 + AluSx SINE Alu 12 304 -8 481 300 100 35 chr20 50055662 50055715 -16612290 - MIR SINE MIR -206 56 8 2141 113 13 0 chr20 50056145 50056447 -16611558 + AluSg SINE Alu 2 307 -3 309 275 99 15 chr20 50056697 50056828 -16611177 + L1ME4a LINE L1 5901 6042 -79 2161 92 10 0 chr20 50057020 50057315 -16610690 + AluSx SINE Alu 15 312 0 2246 89 0 0 chr20 50057318 50057610 -16610395 + AluSg SINE Alu 1 292 -18 21 57 0 0 chr20 50057848 50057883 -16610122 + AT_rich Low_complexity Low_complexity 1 35 0 2363 68 0 0 chr20 50057923 50058216 -16609789 + AluSc SINE Alu 1 293 -16 1928 111 0 14 chr20 50058235 50058515 -16609490 + AluSx SINE Alu 1 276 -36 1920 140 7 0 chr20 50059024 50059324 -16608681 + AluSx SINE Alu 1 302 -10 652 246 7 0 chr20 50059809 50059947 -16608058 + AluJo SINE Alu 1 139 -173 2394 71 0 6 chr20 50059988 50060299 -16607706 + AluY SINE Alu 1 309 -2 3799 145 7 1 chr20 50060299 50061402 -16606603 + L1PB1 LINE L1 4630 5738 -413 550 75 0 0 chr20 50061403 50061470 -16606535 - AluY SINE Alu -134 177 111 2614 133 0 2 chr20 50061473 50061879 -16606126 + L1PB1 LINE L1 5745 6149 -2 816 161 7 0 chr20 50061890 50062027 -16605978 + AluJo SINE Alu 129 266 -46 2192 82 31 3 chr20 50062031 50062325 -16605680 - AluSc SINE Alu -7 302 1 2091 117 3 3 chr20 50062359 50062667 -16605338 + AluSq SINE Alu 1 308 -5 784 284 88 40 chr20 50062789 50063219 -16604786 + L2 LINE L2 2862 3312 -1 1002 198 8 75 chr20 50063377 50063584 -16604421 - MER46A DNA MER2_type -2495 236 47 2019 130 7 0 chr20 50063584 50063892 -16604113 - AluSx SINE Alu -2 310 1 1002 198 8 75 chr20 50063892 50063937 -16604068 - MER46A DNA MER2_type -2684 47 1 399 306 36 0 chr20 50063939 50064050 -16603955 + L2 LINE L2 3196 3310 -3 2381 78 3 0 chr20 50064502 50064811 -16603194 + AluSq SINE Alu 1 310 -3 1916 141 0 0 chr20 50065056 50065347 -16602658 - AluJo SINE Alu -19 293 3 255 125 0 0 chr20 50065367 50065415 -16602590 - Alu SINE Alu 0 300 253 1713 116 65 0 chr20 50065482 50065758 -16602247 + AluY SINE Alu 1 294 -17 1491 196 7 3 chr20 50065776 50066067 -16601938 + AluJb SINE Alu 3 294 -18 31 0 0 0 chr20 50066082 50066113 -16601892 + AT_rich Low_complexity Low_complexity 1 31 0 2075 108 0 3 chr20 50066120 50066416 -16601589 + AluSg SINE Alu 1 295 -15 2273 77 3 3 chr20 50066815 50067114 -16600891 + AluSx SINE Alu 1 299 -13 670 192 0 16 chr20 50067123 50067248 -16600757 + FRAM SINE Alu 34 156 -20 2135 102 0 0 chr20 50067936 50068220 -16599785 + AluSx SINE Alu 4 287 -25 2052 99 0 3 chr20 50068657 50068963 -16599042 + AluSc SINE Alu 1 305 0 1750 205 18 0 chr20 50068995 50069337 -16598668 - MER7A DNA MER2_type 0 346 1 688 214 0 8 chr20 50069358 50069484 -16598521 + FLAM_C SINE Alu 2 126 -17 2168 84 17 0 chr20 50069494 50069790 -16598215 + AluSg SINE Alu 1 301 -9 265 317 24 67 chr20 50069858 50069906 -16598099 - MIR SINE MIR -100 162 113 2181 93 0 3 chr20 50069906 50070207 -16597798 + AluSx SINE Alu 1 300 -12 265 317 24 67 chr20 50070207 50070322 -16597683 - MIR SINE MIR -149 113 6 204 250 40 26 chr20 50071188 50071264 -16596741 + L2 LINE L2 3236 3312 -1 237 300 0 14 chr20 50071264 50071334 -16596671 + GA-rich Low_complexity Low_complexity 1 69 0 789 194 14 0 chr20 50071699 50071843 -16596162 - MLT1A1 LTR MaLR 0 365 220 2140 102 0 3 chr20 50071850 50072143 -16595862 - AluSg SINE Alu -18 292 1 1475 193 17 7 chr20 50072143 50072443 -16595562 - AluJo SINE Alu -9 303 1 1724 163 3 23 chr20 50072452 50072753 -16595252 - AluJb SINE Alu -17 295 1 401 188 299 0 chr20 50072759 50072876 -16595129 - MLT1A1 LTR MaLR -213 152 1 228 67 0 0 chr20 50073116 50073146 -16594859 + (GAAA)n Simple_repeat Simple_repeat 3 32 0 308 336 56 8 chr20 50073662 50073787 -16594218 + L1MC4a LINE L1 5812 5942 -1866 238 282 115 26 chr20 50073982 50074060 -16593945 - L2 LINE L2 -20 3293 3209 664 297 87 36 chr20 50074305 50074902 -16593103 - L2 LINE L2 0 3272 2641 819 126 0 15 chr20 50074990 50075125 -16592880 - FLAM_C SINE Alu 0 133 1 599 202 0 0 chr20 50075130 50075239 -16592766 + L1MB8 LINE L1 6065 6173 -5 280 273 28 91 chr20 50075255 50075398 -16592607 - L2 LINE L2 -660 2654 2521 467 230 37 99 chr20 50075435 50075626 -16592379 - MIR SINE MIR -61 201 23 302 186 0 14 chr20 50075798 50075868 -16592137 + LTR41 LTR ERVL 1 69 -704 240 250 15 0 chr20 50076281 50076349 -16591656 - Charlie8 DNA MER1_type -1003 1414 1346 599 184 0 18 chr20 50076399 50076500 -16591505 + FLAM_A SINE Alu 22 122 -189 2100 110 0 7 chr20 50076500 50076801 -16591204 - AluSx SINE Alu -13 299 1 2111 105 0 19 chr20 50076892 50077206 -16590799 + AluSx SINE Alu 1 308 -4 1854 113 3 25 chr20 50077271 50077555 -16590450 + AluSx SINE Alu 1 278 -34 1836 58 0 17 chr20 50077820 50078060 -16589945 - AluY SINE Alu -11 300 65 652 276 149 58 chr20 50078099 50078516 -16589489 + MLT1K LTR MaLR 87 541 -47 1801 141 0 3 chr20 50078533 50078824 -16589181 - AluJo SINE Alu -18 294 5 1040 83 0 0 chr20 50078898 50079031 -16588974 + AluSq/x SINE Alu 1 133 -180 1578 156 16 38 chr20 50079031 50079345 -16588660 - AluJo SINE Alu -5 307 1 342 162 15 15 chr20 50079431 50079499 -16588506 - MER3 DNA MER1_type -1 208 141 * 578 186 47 64 chr20 50079497 50079669 -16588336 - MER3 DNA MER1_type -87 122 1 2157 95 13 0 chr20 50079769 50080073 -16587932 + AluSp SINE Alu 1 308 -5 580 226 40 80 chr20 50080181 50080220 -16587785 + MER113 DNA MER1_type? 32 71 -450 983 181 42 28 chr20 50080220 50080436 -16587569 + MER20 DNA MER1_type 1 219 0 580 226 40 80 chr20 50080436 50080515 -16587490 + MER113 DNA MER1_type? 71 152 -369 1632 166 17 10 chr20 50080515 50080811 -16587194 + AluJb SINE Alu 1 298 -14 580 226 40 80 chr20 50080811 50080965 -16587040 + MER113 DNA MER1_type? 152 294 -227 2180 94 7 0 chr20 50080987 50081285 -16586720 - AluSx SINE Alu -12 300 1 2333 72 0 16 chr20 50081867 50082173 -16585832 - AluSg SINE Alu -9 301 1 2108 100 3 3 chr20 50082198 50082489 -16585516 + AluSc SINE Alu 1 291 -18 1990 140 13 0 chr20 50082625 50082932 -16585073 - AluSx SINE Alu -1 311 1 1861 126 29 45 chr20 50083318 50083464 -16584541 + AluSq SINE Alu 1 148 -165 2039 82 34 14 chr20 50083464 50083756 -16584249 + AluSc SINE Alu 1 298 -11 1861 126 29 45 chr20 50083756 50083918 -16584087 + AluSq SINE Alu 148 304 -9 1059 170 18 40 chr20 50083946 50084170 -16583835 + MER20 DNA MER1_type 1 219 0 501 178 152 78 chr20 50084178 50084303 -16583702 + MER3 DNA MER1_type 1 146 -63 3129 113 47 6 chr20 50084303 50084790 -16583215 + L1PA14 LINE L1 5646 6152 -9 501 178 152 78 chr20 50084790 50084855 -16583150 + MER3 DNA MER1_type 146 205 -4 2082 103 0 29 chr20 50084887 50085028 -16582977 + AluSx SINE Alu 1 145 -167 2072 120 0 0 chr20 50085028 50085327 -16582678 + AluY SINE Alu 1 299 -12 2082 103 0 29 chr20 50085327 50085497 -16582508 + AluSx SINE Alu 145 303 -9 710 212 0 0 chr20 50086633 50086751 -16581254 + FLAM_C SINE Alu 1 118 -15 204 197 28 14 chr20 50086768 50086839 -16581166 + GA-rich Low_complexity Low_complexity 1 72 0 406 307 182 0 chr20 50087002 50087227 -16580778 + L1MC4a LINE L1 5420 5685 -2123 503 146 90 0 chr20 50087275 50087364 -16580641 + AluJ/FLAM SINE Alu 3 99 -213 483 100 0 0 chr20 50087378 50087448 -16580557 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 323 235 5 152 chr20 50087456 50087550 -16580455 + L1MC4a LINE L1 5732 5838 -1970 681 197 39 0 chr20 50087550 50087677 -16580328 + FLAM_A SINE Alu 1 132 -1 323 235 5 152 chr20 50087677 50087739 -16580266 + L1MC4a LINE L1 5838 5854 -1954 2067 92 17 10 chr20 50087739 50088031 -16579974 - AluSx SINE Alu -18 294 1 323 235 5 152 chr20 50088031 50088077 -16579928 + L1MC4a LINE L1 5854 5905 -1903 1796 114 22 48 chr20 50088336 50088652 -16579353 + AluSx SINE Alu 1 308 -4 385 319 106 18 chr20 50089007 50089233 -16578772 - MIR SINE MIR 0 262 17 1837 141 13 10 chr20 50089723 50090027 -16577978 - AluJo SINE Alu -3 309 5 2305 29 11 4 chr20 50090043 50090358 -16577647 - AluY SINE Alu 0 317 1 465 276 53 33 chr20 50090383 50090535 -16577470 - L2 LINE L2 0 3313 3159 380 266 119 21 chr20 50090652 50090795 -16577210 + MIR SINE MIR 73 229 -33 387 287 33 16 chr20 50090848 50090970 -16577035 + L2 LINE L2 3189 3312 -1 2038 132 3 0 chr20 50091291 50091601 -16576404 + AluSq SINE Alu 1 311 -2 1300 122 0 31 chr20 50091729 50091960 -16576045 + AluSg/x SINE Alu 95 319 0 2132 100 3 25 chr20 50092123 50092442 -16575563 - AluSx SINE Alu 0 312 1 2313 109 0 3 chr20 50092691 50092994 -16575011 + AluSp SINE Alu 2 303 -10 1805 161 3 14 chr20 50093001 50093292 -16574713 + AluSx SINE Alu 1 288 -24 2126 124 13 25 chr20 50093302 50093616 -16574389 + AluSx SINE Alu 1 310 -2 2286 95 3 0 chr20 50093626 50093922 -16574083 + AluSg SINE Alu 1 297 -13 650 224 201 13 chr20 50093931 50094152 -16573853 + L1MB7 LINE L1 5442 5702 -482 2423 52 28 0 chr20 50094152 50094441 -16573564 + AluY SINE Alu 1 297 -14 650 224 201 13 chr20 50094441 50094466 -16573539 + L1MB7 LINE L1 5702 5721 -463 1998 157 13 37 chr20 50094544 50094749 -16573256 - MLT1B LTR MaLR -4 386 193 2391 115 0 0 chr20 50094749 50095061 -16572944 - AluSx SINE Alu 0 312 1 1998 157 13 37 chr20 50095061 50095230 -16572775 - MLT1B LTR MaLR -197 193 21 1076 130 49 5 chr20 50095462 50095647 -16572358 + MER20 DNA MER1_type 1 193 -26 1045 94 0 0 chr20 50095661 50095788 -16572217 - AluSq/x SINE Alu -185 127 1 1671 185 17 7 chr20 50096093 50096385 -16571620 + AluSx SINE Alu 1 295 -17 356 248 103 0 chr20 50096511 50096656 -16571349 + MER113 DNA MER1_type? 53 212 -309 2293 105 0 0 chr20 50097115 50097410 -16570595 + AluSg SINE Alu 1 295 -15 2213 129 0 0 chr20 50097861 50098170 -16569835 + AluSq SINE Alu 1 309 -4 2353 239 33 39 chr20 50098278 50098915 -16569090 - MER82 DNA MER2_type 0 653 21 2414 84 3 0 chr20 50098915 50099213 -16568792 + AluSx SINE Alu 1 299 -13 2174 90 10 23 chr20 50099214 50099513 -16568492 + AluSc SINE Alu 2 296 -13 1339 165 72 67 chr20 50099912 50099950 -16568055 - MLT1D LTR MaLR -6 499 463 2479 54 3 0 chr20 50099950 50100245 -16567760 + AluY SINE Alu 1 296 -15 1339 165 72 67 chr20 50100245 50100552 -16567453 - MLT1D LTR MaLR -42 463 152 2062 134 0 13 chr20 50100553 50100689 -16567316 + AluSq SINE Alu 1 137 -176 2277 96 14 0 chr20 50100689 50100980 -16567025 + AluSc SINE Alu 1 295 -14 2062 134 0 13 chr20 50100980 50101148 -16566857 + AluSq SINE Alu 137 301 -12 1929 150 0 32 chr20 50101176 50101490 -16566515 - AluJb SINE Alu -8 304 1 829 285 18 38 chr20 50101503 50101785 -16566220 + L1MB7 LINE L1 5842 6117 -67 2436 74 0 3 chr20 50101785 50102083 -16565922 - AluY SINE Alu -14 297 1 829 285 18 38 chr20 50102083 50102140 -16565865 + L1MB7 LINE L1 6117 6174 -10 739 210 0 25 chr20 50102592 50102754 -16565251 - MIR SINE MIR -93 169 12 213 271 7 118 chr20 50103154 50103199 -16564806 + MIR SINE MIR 104 152 -110 2249 113 3 0 chr20 50103199 50103491 -16564514 - AluSx SINE Alu -19 293 1 213 271 7 118 chr20 50103491 50103589 -16564416 + MIR SINE MIR 152 231 -31 1935 118 49 3 chr20 50103843 50104130 -16563875 + AluSp SINE Alu 1 300 -13 2117 102 20 17 chr20 50104144 50104439 -16563566 + AluSq SINE Alu 1 296 -17 495 276 55 37 chr20 50104632 50104795 -16563210 - MER5B DNA MER1_type -5 173 8 227 278 33 33 chr20 50104815 50104905 -16563100 + L2 LINE L2 3183 3272 0 256 228 0 18 chr20 50104935 50104992 -16563013 - L2 LINE L2 -4 3309 3254 2265 68 0 4 chr20 50105030 50105339 -16562666 + AluSg1 SINE Alu 1 308 0 21 0 0 0 chr20 50105544 50105565 -16562440 + AT_rich Low_complexity Low_complexity 1 21 0 247 314 17 8 chr20 50105733 50105851 -16562154 - MER5A DNA MER1_type -8 181 63 23 0 0 0 chr20 50106664 50106687 -16561318 + GC_rich Low_complexity Low_complexity 1 23 0 237 182 30 30 chr20 50106840 50106939 -16561066 + (CCG)n Simple_repeat Simple_repeat 2 100 0 29 94 0 0 chr20 50106950 50107035 -16560970 + GC_rich Low_complexity Low_complexity 1 85 0 190 54 27 27 chr20 50107069 50107106 -16560899 + (CCGCG)n Simple_repeat Simple_repeat 1 37 0 262 203 16 55 chr20 50107130 50107258 -16560747 + C-rich Low_complexity Low_complexity 5 127 0 1835 130 38 0 chr20 50108099 50108360 -16559645 - AluSx SINE Alu -12 300 30 271 287 19 102 chr20 50108727 50108835 -16559170 + L2 LINE L2 3214 3312 -1 1072 83 8 0 chr20 50108976 50109109 -16558896 + AluSq/x SINE Alu 1 134 -179 2327 105 3 3 chr20 50109138 50109443 -16558562 + AluSg SINE Alu 1 305 -5 252 171 40 151 chr20 50109555 50109707 -16558298 - L1MC2 LINE L1 0 6344 6210 216 0 0 0 chr20 50109903 50109927 -16558078 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2447 90 3 0 chr20 50109948 50110258 -16557747 - AluY SINE Alu 0 311 1 2275 120 3 0 chr20 50110325 50110633 -16557372 - AluSx SINE Alu -3 309 1 1097 156 6 6 chr20 50110667 50110840 -16557165 - AluJo SINE Alu -139 173 1 300 219 16 73 chr20 50111172 50111295 -16556710 - MIR3 SINE MIR -8 200 85 2151 121 0 0 chr20 50111408 50111721 -16556284 - AluSx SINE Alu 0 313 1 1157 191 34 5 chr20 50111953 50112162 -16555843 - MER20 DNA MER1_type -4 215 1 1949 105 77 18 chr20 50112217 50112503 -16555502 - AluSx SINE Alu -9 303 1 282 282 0 0 chr20 50112563 50112641 -16555364 - MER113 DNA MER1_type? -213 308 231 2365 71 0 0 chr20 50112673 50112953 -16555052 + AluY SINE Alu 1 280 -31 1635 160 15 15 chr20 50112953 50113221 -16554784 - AluJb SINE Alu -29 283 15 210 311 233 0 chr20 50113302 50113405 -16554600 - L2 LINE L2 -2 3270 3144 2333 84 3 35 chr20 50113428 50113739 -16554266 + AluSp SINE Alu 1 301 -12 883 191 167 14 chr20 50113776 50114064 -16553941 + LTR37A LTR ERV1 46 377 -49 258 132 0 0 chr20 50114064 50114102 -16553903 - Tigger1 DNA MER2_type 0 2418 2381 2069 104 24 6 chr20 50114102 50114430 -16553575 + LTR56 LTR ERV1 1 334 -111 1239 173 169 8 chr20 50114430 50114679 -16553326 + AluJb SINE Alu 1 289 -13 1766 177 0 0 chr20 50114689 50114955 -16553050 + AluJb SINE Alu 1 266 -46 342 250 37 9 chr20 50115040 50115148 -16552857 + LTR23 LTR ERV1 327 437 0 5079 125 122 136 chr20 50115148 50115282 -16552723 - Tigger1 DNA MER2_type -34 2384 2250 2332 102 0 10 chr20 50115282 50115595 -16552410 + AluSg SINE Alu 1 310 0 5079 125 122 136 chr20 50115595 50115862 -16552143 - Tigger1 DNA MER2_type -168 2250 1981 2276 85 0 20 chr20 50115862 50116157 -16551848 + AluY SINE Alu 1 289 -22 5079 125 122 136 chr20 50116157 50116302 -16551703 - Tigger1 DNA MER2_type -437 1981 1835 749 159 45 8 chr20 50116302 50116434 -16551571 - AluJo SINE Alu -175 137 1 5079 125 122 136 chr20 50116434 50116682 -16551323 - Tigger1 DNA MER2_type -583 1835 1585 4262 88 9 0 chr20 50116682 50117229 -16550776 + MER41A LTR ERV1 3 554 0 5079 125 122 136 chr20 50117229 50117354 -16550651 - Tigger1 DNA MER2_type -833 1585 1460 2414 81 0 3 chr20 50117354 50117652 -16550353 - AluSg SINE Alu -13 297 1 5079 125 122 136 chr20 50117652 50117778 -16550227 - Tigger1 DNA MER2_type -958 1460 1334 1976 124 55 0 chr20 50117778 50118053 -16549952 + AluSx SINE Alu 3 292 -20 5079 125 122 136 chr20 50118053 50118401 -16549604 - Tigger1 DNA MER2_type -1084 1334 875 2114 132 3 3 chr20 50118401 50118705 -16549300 - AluSp SINE Alu -9 304 1 5079 125 122 136 chr20 50118705 50118734 -16549271 - Tigger1 DNA MER2_type -1543 875 847 1727 109 0 0 chr20 50118735 50118956 -16549049 + AluSp SINE Alu 1 221 -92 2073 129 3 7 chr20 50118977 50119272 -16548733 - AluSx SINE Alu -18 294 1 480 176 20 0 chr20 50119274 50119376 -16548629 - MER7A DNA MER2_type -231 115 14 1152 196 132 0 chr20 50119639 50119874 -16548131 + AluJb SINE Alu 1 266 -46 1919 103 11 15 chr20 50120018 50120279 -16547726 + AluSq SINE Alu 1 260 -53 578 161 0 0 chr20 50120279 50120366 -16547639 + AluJb SINE Alu 211 297 -15 2152 113 17 0 chr20 50120366 50120659 -16547346 + AluSp SINE Alu 1 298 -15 216 0 0 0 chr20 50121021 50121045 -16546960 + (A)n Simple_repeat Simple_repeat 1 24 0 2303 87 3 0 chr20 50122212 50122499 -16545506 + AluSg SINE Alu 2 289 -21 1750 162 46 60 chr20 50123265 50123491 -16544514 - MER47A DNA MER2_type -1958 365 144 2374 99 7 0 chr20 50123491 50123794 -16544211 + AluSx SINE Alu 1 305 -7 1750 162 46 60 chr20 50123794 50123937 -16544068 - MER47A DNA MER2_type -2179 144 1 2565 49 0 13 chr20 50124107 50124412 -16543593 - AluSc SINE Alu -8 301 1 1666 144 46 25 chr20 50124412 50124557 -16543448 - AluJo SINE Alu -22 290 150 2406 68 0 26 chr20 50124557 50124864 -16543141 - AluY SINE Alu -12 299 1 1666 144 46 25 chr20 50124864 50125002 -16543003 - AluJo SINE Alu -162 150 1 833 202 75 32 chr20 50125022 50125274 -16542731 + L1MD2 LINE L1 6095 6357 -2 2207 105 7 0 chr20 50125283 50125605 -16542400 + AluSq SINE Alu 1 324 0 1917 131 4 7 chr20 50125611 50125886 -16542119 + AluSx SINE Alu 1 274 -38 854 150 0 0 chr20 50126150 50126277 -16541728 - FLAM_C SINE Alu -16 127 1 1815 159 0 11 chr20 50126310 50126593 -16541412 - AluJo SINE Alu -30 282 3 1171 189 58 50 chr20 50126629 50126794 -16541211 - AluJo SINE Alu -15 297 135 315 0 0 0 chr20 50126794 50126829 -16541176 + (TG)n Simple_repeat Simple_repeat 2 36 0 1171 189 58 50 chr20 50126829 50126879 -16541126 - AluJo SINE Alu -177 135 87 2286 65 0 28 chr20 50126879 50127193 -16540812 + AluY SINE Alu 1 306 0 1171 189 58 50 chr20 50127193 50127234 -16540771 - AluJo SINE Alu -225 87 37 2272 129 0 0 chr20 50130877 50131188 -16536817 + AluSx SINE Alu 1 311 -1 1041 169 193 43 chr20 50131687 50131941 -16536064 + AluJb SINE Alu 1 292 -10 1629 101 123 0 chr20 50131971 50132199 -16535806 - AluSq SINE Alu -57 256 1 198 231 215 0 chr20 50132609 50132674 -16535331 - L2 LINE L2 -6 3266 3188 1912 123 95 0 chr20 50132766 50133051 -16534954 + AluSp SINE Alu 1 312 -1 578 222 159 23 chr20 50133127 50133303 -16534702 - MIR SINE MIR -18 244 45 1962 90 4 4 chr20 50133640 50133906 -16534099 + AluY SINE Alu 45 310 -1 242 243 0 40 chr20 50134009 50134083 -16533922 + L1ME LINE L1 5535 5605 -516 331 318 101 14 chr20 50134112 50134260 -16533745 + L1MC/D LINE L1 5508 5668 -2140 2413 93 6 13 chr20 50134383 50134696 -16533309 + AluSx SINE Alu 1 311 -1 1137 121 162 0 chr20 50134840 50135038 -16532967 - MER30 DNA MER1_type 0 230 1 202 286 116 17 chr20 50135040 50135159 -16532846 - MIR SINE MIR -65 143 69 462 237 183 0 chr20 50135260 50135446 -16532559 - MER106A DNA MER1_type -16 220 1 813 188 40 6 chr20 50135472 50135648 -16532357 + Charlie4a DNA MER1_type 36 217 -291 520 171 160 6 chr20 50135651 50135826 -16532179 + Charlie4a DNA MER1_type 253 454 -54 189 232 159 14 chr20 50136841 50136910 -16531095 + L2 LINE L2 3197 3275 -38 320 0 25 0 chr20 50137316 50137356 -16530649 + (CAAAA)n Simple_repeat Simple_repeat 2 42 0 21 36 0 0 chr20 50140755 50140783 -16527222 + GC_rich Low_complexity Low_complexity 1 28 0 309 344 110 32 chr20 50142878 50143096 -16524909 - MIR SINE MIR 0 262 28 2159 135 0 0 chr20 50143438 50143742 -16524263 + AluSx SINE Alu 1 304 -8 624 124 31 0 chr20 50144029 50144126 -16523879 - AluSp/q SINE Alu -3 310 211 2128 108 34 0 chr20 50144033 50144329 -16523676 - AluSq SINE Alu -7 306 1 230 305 149 35 chr20 50144522 50144804 -16523201 + L2 LINE L2 2982 3295 -18 2614 116 78 61 chr20 50144878 50145195 -16522810 + L1MB2 LINE L1 5537 5868 -303 2407 74 13 10 chr20 50145195 50145504 -16522501 - AluY SINE Alu -1 310 1 2614 116 78 61 chr20 50145504 50145696 -16522309 + L1MB2 LINE L1 5868 6055 -116 371 217 38 45 chr20 50145712 50145869 -16522136 + L1MA9 LINE L1 6132 6287 -25 * 527 188 0 69 chr20 50145863 50145877 -16522128 + L1MB2 LINE L1 6038 6051 -120 2175 116 23 0 chr20 50145877 50146179 -16521826 + AluSg SINE Alu 1 309 -1 527 188 0 69 chr20 50146179 50146308 -16521697 + L1MB2 LINE L1 6051 6171 0 315 287 14 0 chr20 50146317 50146439 -16521566 + L1MB8 LINE L1 6060 6184 0 1794 158 6 40 chr20 50147147 50147469 -16520536 + AluJo SINE Alu 1 311 -1 1047 182 0 0 chr20 50147474 50147639 -16520366 + FRAM SINE Alu 3 167 -9 2233 103 10 0 chr20 50147640 50147932 -16520073 + AluSg SINE Alu 1 295 -15 2359 91 7 3 chr20 50147938 50148245 -16519760 + AluSq SINE Alu 3 310 -3 2547 57 3 0 chr20 50148346 50148647 -16519358 + AluY SINE Alu 1 302 -9 891 167 121 35 chr20 50148774 50148972 -16519033 + MER20 DNA MER1_type 1 215 -4 356 289 84 28 chr20 50149335 50149477 -16518528 - L1ME LINE L1 -322 5799 5650 25 0 0 0 chr20 50150064 50150089 -16517916 + AT_rich Low_complexity Low_complexity 1 25 0 264 348 111 43 chr20 50150639 50150846 -16517159 + MIR SINE MIR 37 257 -5 186 306 24 47 chr20 50150971 50151056 -16516949 - L2 LINE L2 0 3272 3190 1053 207 82 11 chr20 50151335 50151615 -16516390 - L2 LINE L2 -181 3132 2833 2224 118 0 0 chr20 50151693 50151990 -16516015 - AluSx SINE Alu -7 305 9 2279 122 0 3 chr20 50152131 50152442 -16515563 + AluSx SINE Alu 1 310 -2 2170 115 0 7 chr20 50152442 50152758 -16515247 - AluSg SINE Alu 0 310 1 909 195 6 6 chr20 50152804 50152973 -16515032 + FAM SINE Alu 2 170 -5 2286 116 0 0 chr20 50153094 50153396 -16514609 + AluY SINE Alu 1 302 -9 2453 276 91 19 chr20 50153417 50154511 -16513494 - L2 LINE L2 -540 2774 1602 2048 134 22 31 chr20 50154517 50154600 -16513405 - MER47A DNA MER2_type -1957 366 284 1682 120 8 47 chr20 50154600 50154703 -16513302 + AluSx SINE Alu 43 148 -164 2340 87 0 17 chr20 50154703 50155001 -16513004 + AluSg SINE Alu 1 293 -17 1682 120 8 47 chr20 50155001 50155155 -16512850 + AluSx SINE Alu 148 290 -22 2048 134 22 31 chr20 50155155 50155430 -16512575 - MER47A DNA MER2_type -2039 284 11 647 178 0 25 chr20 50155464 50155582 -16512423 + AluJo/FLAM SINE Alu 2 116 -186 2036 144 0 47 chr20 50155584 50155755 -16512250 - AluSx SINE Alu -8 304 127 2457 88 0 3 chr20 50155755 50156063 -16511942 - AluY SINE Alu -4 307 1 2536 73 0 6 chr20 50156063 50156376 -16511629 - AluY SINE Alu 0 311 1 2036 144 0 47 chr20 50156376 50156522 -16511483 - AluSx SINE Alu -183 129 1 180 77 0 0 chr20 50156522 50156548 -16511457 + (TTTTA)n Simple_repeat Simple_repeat 2 27 0 1733 119 38 11 chr20 50156550 50156811 -16511194 - AluSx SINE Alu -31 281 14 35 24 0 0 chr20 50156811 50156853 -16511152 + AT_rich Low_complexity Low_complexity 1 42 0 710 276 70 31 chr20 50156858 50157144 -16510861 - L2 LINE L2 -1760 1554 1258 340 229 46 18 chr20 50157169 50157278 -16510727 - L1M4 LINE L1 -2962 3184 3073 575 148 0 9 chr20 50157282 50157390 -16510615 + (TTCC)n Simple_repeat Simple_repeat 3 109 0 1356 117 0 0 chr20 50157398 50157578 -16510427 - AluSp SINE Alu 0 313 134 1524 118 179 4 chr20 50157578 50157840 -16510165 - AluSq SINE Alu -5 308 1 1638 159 57 20 chr20 50157842 50157863 -16510142 - AluJb SINE Alu -5 307 288 453 62 0 0 chr20 50157863 50157928 -16510077 + (TA)n Simple_repeat Simple_repeat 2 66 0 1638 159 57 20 chr20 50157928 50158202 -16509803 - AluJb SINE Alu -24 288 1 1887 288 108 25 chr20 50158203 50159144 -16508861 - L2 LINE L2 -2084 1230 212 2464 64 0 35 chr20 50159155 50159469 -16508536 + AluSg SINE Alu 1 303 -7 370 234 188 23 chr20 50159496 50159624 -16508381 - MIR SINE MIR -36 226 78 1488 166 72 0 chr20 50159661 50159968 -16508037 + MER58D DNA MER1_type 18 346 -40 320 145 0 16 chr20 50159972 50160034 -16507971 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 1472 188 35 41 chr20 50160037 50160211 -16507794 - AluJb SINE Alu 0 312 138 2311 106 0 0 chr20 50160211 50160512 -16507493 - AluSx SINE Alu -11 301 1 2162 124 0 16 chr20 50160515 50160822 -16507183 - AluSx SINE Alu -10 302 1 2640 61 0 3 chr20 50160828 50161140 -16506865 - AluY SINE Alu 0 311 1 1472 188 35 41 chr20 50161140 50161268 -16506737 - AluJb SINE Alu -181 131 1 279 160 20 0 chr20 50161268 50161318 -16506687 + MER58D DNA MER1_type 336 386 0 2316 115 0 0 chr20 50161479 50161791 -16506214 + AluSx SINE Alu 1 312 0 240 163 0 0 chr20 50161801 50161844 -16506161 + (TGAG)n Simple_repeat Simple_repeat 1 43 0 208 351 137 0 chr20 50162203 50162334 -16505671 - MIR SINE MIR -8 254 106 549 286 191 22 chr20 50162471 50162547 -16505458 - L2 LINE L2 -92 3221 3159 1856 161 23 7 chr20 50162547 50162851 -16505154 + AluSx SINE Alu 1 309 -3 1963 137 19 32 chr20 50162853 50163166 -16504839 + AluSx SINE Alu 1 309 -3 549 286 191 22 chr20 50163166 50163577 -16504428 - L2 LINE L2 -154 3159 2644 368 252 183 0 chr20 50163716 50163770 -16504235 - MER45A DNA AcHobo -1404 177 134 2588 62 0 0 chr20 50163770 50164079 -16503926 + AluY SINE Alu 1 309 -2 368 252 183 0 chr20 50164079 50164139 -16503866 - MER45A DNA AcHobo -1447 134 42 205 241 138 0 chr20 50164153 50164211 -16503794 - L2 LINE L2 -227 3086 3021 1436 156 49 78 chr20 50164238 50164546 -16503459 + AluJo SINE Alu 1 299 -13 2208 108 0 3 chr20 50164548 50164844 -16503161 + AluSx SINE Alu 1 295 -17 207 0 0 0 chr20 50164847 50164870 -16503135 + (GA)n Simple_repeat Simple_repeat 2 24 0 2282 74 7 7 chr20 50165150 50165433 -16502572 + AluSp SINE Alu 17 299 -14 237 208 0 42 chr20 50165595 50165643 -16502362 - L2 LINE L2 -6 3307 3262 336 296 87 17 chr20 50165850 50166022 -16501983 + L2 LINE L2 3103 3286 -27 2437 98 3 0 chr20 50166186 50166493 -16501512 + AluSq SINE Alu 1 308 -5 2388 97 0 3 chr20 50166582 50166880 -16501125 + AluSx SINE Alu 1 297 -15 442 311 70 30 chr20 50167377 50167708 -16500297 + L2 LINE L2 2772 3108 -205 231 162 0 0 chr20 50167711 50167748 -16500257 + L2 LINE L2 2930 2966 -306 683 124 0 0 chr20 50167761 50167874 -16500131 - AluSg/x SINE Alu 0 308 196 1137 177 105 88 chr20 50167888 50168028 -16499977 - AluJo SINE Alu -3 299 163 2143 133 0 3 chr20 50168028 50168329 -16499676 - AluSx SINE Alu -12 300 1 1137 177 105 88 chr20 50168329 50168482 -16499523 - AluJo SINE Alu -139 163 1 219 355 60 42 chr20 50168608 50168774 -16499231 + L2 LINE L2 3120 3288 -25 1768 138 101 0 chr20 50168902 50169178 -16498827 + AluSx SINE Alu 1 304 -8 486 119 0 0 chr20 50169178 50169262 -16498743 + (GA)n Simple_repeat Simple_repeat 1 84 0 1875 135 4 0 chr20 50169352 50169612 -16498393 - AluSx SINE Alu -51 261 1 654 307 35 13 chr20 50169637 50169868 -16498137 + MIR SINE MIR 9 244 -18 2486 53 0 10 chr20 50169881 50170181 -16497824 - AluY SINE Alu -14 297 1 1041 271 97 15 chr20 50170787 50171190 -16496815 + LTR33 LTR ERVL 1 436 -85 1116 163 41 5 chr20 50171190 50171386 -16496619 + AluSg/x SINE Alu 98 300 -10 2206 125 3 0 chr20 50171460 50171764 -16496241 - AluSx SINE Alu -3 309 5 411 283 81 58 chr20 50172037 50172063 -16495942 + MIR SINE MIR 3 27 -235 1020 231 163 15 chr20 50172063 50172401 -16495604 - MLT1B LTR MaLR -2 388 1 411 283 81 58 chr20 50172401 50172450 -16495555 + MIR SINE MIR 27 73 -189 2368 77 0 3 chr20 50172450 50172761 -16495244 - AluSx SINE Alu 0 310 1 411 283 81 58 chr20 50172761 50172825 -16495180 + MIR SINE MIR 73 134 -128 1361 155 44 98 chr20 50172825 50173142 -16494863 + AluJb SINE Alu 3 302 -10 411 283 81 58 chr20 50173142 50173222 -16494783 + MIR SINE MIR 134 230 -32 2217 73 36 0 chr20 50173246 50173521 -16494484 + AluY SINE Alu 12 296 -15 1243 284 65 55 chr20 50173622 50173969 -16494036 + L2 LINE L2 2359 2701 -612 2264 106 0 0 chr20 50173969 50174283 -16493722 + AluSx SINE Alu 1 312 0 1243 284 65 55 chr20 50174283 50174647 -16493358 + L2 LINE L2 2701 3060 -253 2085 156 0 10 chr20 50174647 50174961 -16493044 - AluSx SINE Alu -1 311 1 1243 284 65 55 chr20 50174961 50174972 -16493033 + L2 LINE L2 3060 3069 -244 2447 88 0 3 chr20 50174972 50175277 -16492728 - AluSc SINE Alu -5 304 1 1243 284 65 55 chr20 50175277 50175487 -16492518 + L2 LINE L2 3069 3299 -14 1340 155 65 65 chr20 50175618 50175737 -16492268 + AluJo SINE Alu 5 123 -189 1811 181 24 0 chr20 50175737 50176024 -16491981 - AluJb SINE Alu -15 297 4 1340 155 65 65 chr20 50176024 50176182 -16491823 + AluJo SINE Alu 122 282 -30 216 0 0 0 chr20 50176186 50176210 -16491795 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2267 75 0 0 chr20 50176879 50177158 -16490847 - AluY SINE Alu -32 279 1 574 285 11 17 chr20 50177159 50177338 -16490667 - MIR SINE MIR -35 227 50 390 21 0 0 chr20 50177382 50177429 -16490576 + (TCTA)n Simple_repeat Simple_repeat 4 50 0 2466 72 0 0 chr20 50177429 50177719 -16490286 - AluSx SINE Alu -22 290 1 25 0 0 0 chr20 50177755 50177780 -16490225 + AT_rich Low_complexity Low_complexity 1 25 0 1173 141 0 0 chr20 50178078 50178255 -16489750 - AluSp SINE Alu 0 313 137 2451 79 0 0 chr20 50178300 50178592 -16489413 - AluY SINE Alu -19 292 1 2636 37 0 7 chr20 50178621 50178920 -16489085 - AluY SINE Alu -12 299 3 27 0 0 0 chr20 50178922 50178949 -16489056 + AT_rich Low_complexity Low_complexity 1 27 0 2118 109 3 7 chr20 50178955 50179279 -16488726 + AluSq SINE Alu 1 323 0 339 25 0 0 chr20 50179492 50179532 -16488473 + (TC)n Simple_repeat Simple_repeat 1 40 0 234 271 0 0 chr20 50179799 50179847 -16488158 - L2 LINE L2 0 3313 3266 312 293 95 0 chr20 50179854 50180001 -16488004 - MER96 DNA MER1_type? -7 168 8 282 268 0 0 chr20 50180001 50180057 -16487948 - L2 LINE L2 -33 3280 3225 1955 154 3 7 chr20 50180143 50180436 -16487569 + AluJb SINE Alu 3 294 -18 2566 81 0 0 chr20 50180438 50180747 -16487258 + AluSq SINE Alu 1 309 -4 180 217 0 43 chr20 50181698 50181744 -16486261 - MIR SINE MIR -3 259 216 * 489 288 28 117 chr20 50181711 50182104 -16485901 - L2 LINE L2 -21 3251 2894 245 286 162 11 chr20 50182185 50182370 -16485635 - L2 LINE L2 -636 2678 2466 2335 108 0 9 chr20 50182548 50182683 -16485322 + AluSq SINE Alu 1 136 -177 2246 99 0 29 chr20 50182683 50182997 -16485008 + AluSq SINE Alu 1 305 -8 2335 108 0 9 chr20 50182997 50183176 -16484829 + AluSq SINE Alu 136 312 -1 317 232 212 99 chr20 50183642 50183700 -16484305 + MER5A DNA MER1_type 22 72 -117 2568 46 7 3 chr20 50183700 50184002 -16484003 + AluY SINE Alu 3 305 -6 317 232 212 99 chr20 50184002 50184094 -16483911 + MER5A DNA MER1_type 72 189 0 1485 148 55 127 chr20 50184104 50184434 -16483571 - AluJo SINE Alu -6 306 1 304 270 29 7 chr20 50184434 50184571 -16483434 + (TA)n Simple_repeat Simple_repeat 1 140 0 1265 56 0 19 chr20 50184717 50184878 -16483127 - AluY SINE Alu -153 158 1 21 0 0 0 chr20 50184907 50184928 -16483077 + AT_rich Low_complexity Low_complexity 1 21 0 532 301 23 70 chr20 50184995 50185139 -16482866 + L1MC4a LINE L1 5611 5760 -2048 2245 97 7 0 chr20 50185139 50185429 -16482576 + AluSx SINE Alu 3 294 -18 532 301 23 70 chr20 50185429 50185513 -16482492 + L1MC4a LINE L1 5760 5846 -1962 2433 94 0 3 chr20 50185513 50185821 -16482184 + AluSx SINE Alu 1 307 -5 532 301 23 70 chr20 50185821 50185976 -16482029 + L1MC4a LINE L1 5846 5977 -1831 249 180 0 0 chr20 50187113 50187163 -16480842 + GA-rich Low_complexity Low_complexity 1 50 0 1736 179 13 19 chr20 50187343 50187650 -16480355 - AluJb SINE Alu -7 305 1 232 213 33 0 chr20 50187808 50187869 -16480136 + (TATATG)n Simple_repeat Simple_repeat 4 66 0 268 235 35 47 chr20 50187956 50188041 -16479964 + MIR SINE MIR 69 152 -110 2143 133 7 3 chr20 50188156 50188464 -16479541 + AluSx SINE Alu 1 309 -3 1922 122 17 30 chr20 50188640 50188935 -16479070 + AluJb SINE Alu 12 302 -10 2250 106 3 13 chr20 50189017 50189319 -16478686 + AluSx SINE Alu 1 299 -13 373 220 64 9 chr20 50189319 50189428 -16478577 + L1MB8 LINE L1 6064 6178 0 2167 69 87 0 chr20 50189438 50189726 -16478279 + AluSp SINE Alu 1 313 0 2422 72 0 10 chr20 50190123 50190427 -16477578 - AluY SINE Alu -10 301 1 2500 74 0 0 chr20 50190629 50190925 -16477080 - AluSx SINE Alu -16 296 1 1725 181 3 7 chr20 50191039 50191331 -16476674 - AluJo SINE Alu -13 299 9 819 283 55 66 chr20 50191772 50192004 -16476001 + L1MC4a LINE L1 5378 5611 -2197 1998 116 27 36 chr20 50192004 50192305 -16475700 - AluSx SINE Alu -14 298 1 819 283 55 66 chr20 50192305 50192585 -16475420 + L1MC4a LINE L1 5611 5886 -1922 2169 105 10 30 chr20 50192585 50192890 -16475115 + AluSx SINE Alu 1 299 -13 819 283 55 66 chr20 50192890 50192938 -16475067 + L1MC4a LINE L1 5886 5933 -1875 380 200 0 0 chr20 50192940 50193015 -16474990 + MER116 DNA Mariner 1 75 -5 472 150 37 16 chr20 50193046 50193098 -16474907 - L1MD2 LINE L1 0 6359 6310 2609 57 0 16 chr20 50193098 50193414 -16474591 - AluY SINE Alu 0 311 1 472 150 37 16 chr20 50193414 50193724 -16474281 - L1MD2 LINE L1 -49 6310 5885 991 193 0 0 chr20 50193724 50193895 -16474110 - AluJo/FRAM SINE Alu -4 308 138 2546 79 0 0 chr20 50193898 50194202 -16473803 - AluSx SINE Alu -8 304 1 751 139 40 46 chr20 50194202 50194353 -16473652 - L1MD2 LINE L1 -568 5674 5525 2353 110 0 3 chr20 50194687 50194987 -16473018 - AluSx SINE Alu -13 299 1 322 301 87 46 chr20 50195314 50195510 -16472495 - MIR SINE MIR -50 212 9 1347 187 0 100 chr20 50195565 50195826 -16472179 + L1MB5 LINE L1 4914 5125 -1021 1246 130 232 8 chr20 50195826 50196072 -16471933 - AluSg SINE Alu -9 301 1 1347 187 0 100 chr20 50196072 50196201 -16471804 + L1MB5 LINE L1 5125 5265 -881 1138 99 0 0 chr20 50196212 50196363 -16471642 - AluSq/x SINE Alu -161 151 1 1073 195 30 9 chr20 50196367 50196598 -16471407 + L1MB5 LINE L1 5259 5494 -686 2063 116 7 0 chr20 50196608 50196901 -16471104 + AluSx SINE Alu 1 295 -17 1912 118 0 24 chr20 50196903 50197246 -16470759 + AluSc SINE Alu 1 336 0 2285 178 23 69 chr20 50197246 50197768 -16470237 + L1MB5 LINE L1 5668 6165 -9 2513 52 3 0 chr20 50197768 50198074 -16469931 - AluSp SINE Alu -6 307 1 2131 105 10 0 chr20 50199306 50199600 -16468405 - AluSx SINE Alu -10 302 6 193 239 183 0 chr20 50199802 50199873 -16468132 + MIR SINE MIR 179 262 0 337 241 15 0 chr20 50199879 50200012 -16467993 + (TCCA)n Simple_repeat Simple_repeat 4 138 0 492 136 0 0 chr20 50200041 50200129 -16467876 + (TCCA)n Simple_repeat Simple_repeat 3 90 0 198 341 70 31 chr20 50200131 50200260 -16467745 - L2 LINE L2 -1 3271 3138 216 0 0 0 chr20 50200478 50200502 -16467503 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1884 64 135 25 chr20 50200928 50201209 -16466796 + AluSp SINE Alu 1 312 -1 701 283 178 13 chr20 50201209 50201591 -16466414 - MLT1J LTR MaLR -66 445 1 212 298 101 63 chr20 50201782 50201940 -16466065 + MIR SINE MIR 38 201 -61 2467 46 3 0 chr20 50201998 50202300 -16465705 - AluY SINE Alu -8 303 1 1870 123 42 0 chr20 50202382 50202667 -16465338 - AluSx SINE Alu -15 297 1 1989 102 35 0 chr20 50203218 50203501 -16464504 + AluSx SINE Alu 1 293 -19 516 277 230 34 chr20 50203742 50203798 -16464207 + L2 LINE L2 2122 2166 -1148 816 214 12 6 chr20 50203798 50203971 -16464034 + MER5B DNA MER1_type 5 178 0 516 277 230 34 chr20 50203971 50204293 -16463712 + L2 LINE L2 2166 2574 -740 230 205 0 0 chr20 50204382 50204421 -16463584 + AluJ/monomer SINE Alu 1 39 -261 2064 100 0 33 chr20 50204437 50204736 -16463269 - AluSx SINE Alu -23 289 1 808 141 7 7 chr20 50204736 50204871 -16463134 + AluJo/FRAM SINE Alu 162 296 -16 327 93 38 3 chr20 50204871 50204943 -16463062 + L1ME LINE L1 5371 5441 -721 2096 125 0 0 chr20 50204943 50205239 -16462766 + AluSx SINE Alu 1 296 -16 801 101 59 0 chr20 50205239 50205358 -16462647 + Tigger3(Golem) DNA MER2_type 2788 2913 -116 1126 196 63 103 chr20 50205396 50205461 -16462544 + L1ME3 LINE L1 5744 5810 -352 2456 46 3 3 chr20 50205461 50205765 -16462240 + AluY SINE Alu 1 304 -7 1126 196 63 103 chr20 50205765 50206088 -16461917 + L1ME3 LINE L1 5810 6116 -46 1715 90 82 41 chr20 50206088 50206355 -16461650 + AluSx SINE Alu 25 302 -10 1126 196 63 103 chr20 50206355 50206393 -16461612 + L1ME3 LINE L1 6116 6154 -8 1833 161 0 19 chr20 50206406 50206717 -16461288 + AluJb SINE Alu 1 305 -7 198 367 22 14 chr20 50206733 50206872 -16461133 + L2 LINE L2 2727 2866 -448 1980 121 3 3 chr20 50206872 50207162 -16460843 - AluSx SINE Alu -22 290 1 1096 288 115 12 chr20 50207236 50207740 -16460265 - L1ME3A LINE L1 -251 5919 5364 1723 156 0 33 chr20 50207918 50208225 -16459780 + AluSx SINE Alu 1 297 -15 2022 104 10 20 chr20 50208227 50208526 -16459479 + AluY SINE Alu 1 296 -15 29 0 0 0 chr20 50208566 50208595 -16459410 + AT_rich Low_complexity Low_complexity 1 29 0 2293 77 0 7 chr20 50208913 50209213 -16458792 - AluY SINE Alu -13 298 1 971 219 5 9 chr20 50209602 50209812 -16458193 - MER3 DNA MER1_type 0 209 1 1931 130 0 16 chr20 50209894 50210201 -16457804 - AluJb SINE Alu 0 312 11 2211 88 0 7 chr20 50210793 50211089 -16456916 - AluSc SINE Alu -15 294 1 378 250 156 0 chr20 50211117 50211213 -16456792 + MER81 DNA DNA 4 114 0 695 198 51 28 chr20 50211286 50211463 -16456542 - MIR SINE MIR -12 250 70 2034 123 3 16 chr20 50211517 50211698 -16456307 - AluSx SINE Alu -6 306 129 1914 116 41 3 chr20 50211698 50211990 -16456015 - AluSx SINE Alu -9 303 1 2034 123 3 16 chr20 50211990 50212118 -16455887 - AluSx SINE Alu -183 129 1 373 244 126 0 chr20 50212561 50212688 -16455317 - MIR SINE MIR -11 251 109 1063 183 9 36 chr20 50212708 50212932 -16455073 + MER20 DNA MER1_type 1 218 -1 378 123 18 0 chr20 50213112 50213169 -16454836 + L2 LINE L2 3256 3313 0 345 330 35 45 chr20 50213177 50213321 -16454684 - MIR SINE MIR 0 262 119 2315 83 0 3 chr20 50213321 50213623 -16454382 + AluY SINE Alu 1 301 -10 345 330 35 45 chr20 50213623 50213678 -16454327 - MIR SINE MIR -143 119 65 2001 92 27 14 chr20 50213781 50214074 -16453931 - AluY SINE Alu -14 297 1 1619 153 39 7 chr20 50214149 50214431 -16453574 - AluJo SINE Alu -19 293 3 2206 79 3 0 chr20 50214458 50214749 -16453256 + AluSc SINE Alu 1 292 -17 206 146 24 0 chr20 50215533 50215574 -16452431 + (CAA)n Simple_repeat Simple_repeat 2 43 0 1135 178 28 45 chr20 50215700 50215947 -16452058 + L1MB1 LINE L1 5890 6132 -36 2466 64 0 6 chr20 50215959 50216273 -16451732 + AluSp SINE Alu 1 312 -1 709 179 0 0 chr20 50216275 50216392 -16451613 + FLAM_C SINE Alu 2 118 -25 236 127 0 55 chr20 50216413 50216468 -16451537 + L1MB1 LINE L1 6116 6167 -1 2037 132 3 0 chr20 50216581 50216891 -16451114 - AluSq SINE Alu -2 311 1 23 0 0 0 chr20 50216931 50216954 -16451051 + AT_rich Low_complexity Low_complexity 1 23 0 2251 72 10 0 chr20 50217053 50217346 -16450659 - AluY SINE Alu -15 296 1 25 31 0 0 chr20 50217755 50217787 -16450218 + AT_rich Low_complexity Low_complexity 1 32 0 1895 90 28 55 chr20 50217787 50218076 -16449929 - AluSg SINE Alu -27 283 3 2070 115 3 3 chr20 50218091 50218396 -16449609 - AluSx SINE Alu -7 305 1 2093 122 3 0 chr20 50218397 50218692 -16449313 - AluSg SINE Alu -14 296 1 519 294 100 22 chr20 50218703 50218934 -16449071 - MIR SINE MIR -1 261 13 612 253 114 25 chr20 50219179 50219335 -16448670 + MIR SINE MIR 5 190 -72 1849 164 3 0 chr20 50219335 50219633 -16448372 + AluSx SINE Alu 1 299 -13 612 253 114 25 chr20 50219633 50219713 -16448292 + MIR SINE MIR 190 262 0 2168 102 0 3 chr20 50219847 50220151 -16447854 - AluSc SINE Alu -6 303 1 2610 189 15 60 chr20 50220221 50220694 -16447311 + L1MB7 LINE L1 5222 5666 -518 1433 171 37 68 chr20 50220694 50221016 -16446989 - AluSx SINE Alu 0 312 1 2610 189 15 60 chr20 50221016 50221206 -16446799 + L1MB7 LINE L1 5666 5863 -321 917 245 0 14 chr20 50221173 50221389 -16446616 + L1M4 LINE L1 4796 5008 -1138 * 726 169 0 0 chr20 50221397 50221515 -16446490 + FLAM_C SINE Alu 7 124 -19 239 229 0 0 chr20 50221525 50221586 -16446419 + L1M2 LINE L1 4992 5052 -1094 2071 107 0 3 chr20 50221590 50221920 -16446085 + AluSq SINE Alu 1 313 0 1201 151 20 124 chr20 50221928 50222025 -16445980 + L1M2 LINE L1 5514 5619 -693 1850 116 40 4 chr20 50222025 50222301 -16445704 + AluSx SINE Alu 1 286 -26 1201 151 20 124 chr20 50222301 50222501 -16445504 + L1M2 LINE L1 5619 5780 -532 2088 116 3 3 chr20 50222501 50222811 -16445194 + AluSx SINE Alu 1 310 -2 548 264 5 2 chr20 50222811 50223012 -16444993 + MER82 DNA MER2_type 412 647 -6 1944 123 0 30 chr20 50223387 50223688 -16444317 - AluSx SINE Alu -20 292 1 2195 72 3 47 chr20 50223715 50224034 -16443971 + AluSp SINE Alu 1 305 -8 2224 99 0 3 chr20 50224037 50224341 -16443664 + AluSg SINE Alu 2 304 -6 317 193 171 23 chr20 50224443 50224531 -16443474 + MIR SINE MIR 42 142 -120 695 180 0 8 chr20 50224718 50224840 -16443165 - FLAM_C SINE Alu -11 122 2 619 242 67 17 chr20 50225003 50225181 -16442824 + L2 LINE L2 3126 3312 -1 912 199 34 29 chr20 50225296 50225502 -16442503 - MER3 DNA MER1_type -2 207 1 1196 183 34 0 chr20 50225510 50225718 -16442287 + MER20 DNA MER1_type 1 215 -4 1085 193 65 40 chr20 50226059 50226119 -16441886 + MER58B DNA MER1_type 60 117 -2303 2057 114 3 16 chr20 50226119 50226435 -16441570 + AluSx SINE Alu 1 312 0 1085 193 65 40 chr20 50226435 50226649 -16441356 + MER58B DNA MER1_type 117 341 0 500 151 21 0 chr20 50227393 50227486 -16440519 - FLAM_C SINE Alu -6 137 43 192 77 0 0 chr20 50228237 50228263 -16439742 + (CA)n Simple_repeat Simple_repeat 1 26 0 494 152 45 27 chr20 50228277 50228389 -16439616 + MER58 DNA MER1_type 85 198 -143 265 281 124 16 chr20 50228613 50228734 -16439271 + MIR SINE MIR 129 262 0 2138 88 3 3 chr20 50228750 50229046 -16438959 - AluSc SINE Alu -13 296 1 271 98 24 0 chr20 50229112 50229153 -16438852 + MADE1 DNA Mariner 1 42 -38 1076 113 0 0 chr20 50229156 50229315 -16438690 - AluSg/x SINE Alu 0 312 154 521 100 0 0 chr20 50229315 50229385 -16438620 - AluSg/x SINE Alu -88 222 153 1517 125 5 0 chr20 50229385 50229609 -16438396 - AluSq SINE Alu -88 225 1 371 229 86 9 chr20 50229696 50229801 -16438204 + L1ME LINE L1 5545 5657 -464 1759 247 40 32 chr20 50229886 50230112 -16437893 - L1MEc LINE L1 -3679 2536 2313 1847 147 0 41 chr20 50230112 50230432 -16437573 + AluSx SINE Alu 1 307 -5 1759 247 40 32 chr20 50230432 50230918 -16437087 - L1MEc LINE L1 -3902 2313 1854 2261 81 3 0 chr20 50230918 50231215 -16436790 - AluSg SINE Alu -12 298 1 780 161 0 0 chr20 50231230 50231373 -16436632 - L1MC3 LINE L1 -7 7778 7636 2000 122 0 3 chr20 50231387 50231699 -16436306 - AluSx SINE Alu 0 311 1 463 52 0 0 chr20 50231699 50231757 -16436248 - AluSg/x SINE Alu -177 133 76 1261 168 0 9 chr20 50231757 50231971 -16436034 - AluSx SINE Alu -100 212 1 1208 190 4 0 chr20 50231975 50232201 -16435804 - L1MC3 LINE L1 -159 7626 7400 775 109 9 0 chr20 50232201 50232311 -16435694 + Alu SINE Alu 192 302 -9 861 141 192 0 chr20 50232311 50232488 -16435517 - L1MC3 LINE L1 -374 7411 7201 2087 158 0 15 chr20 50233039 50233381 -16434624 - MER1B DNA MER1_type 0 337 1 745 191 43 0 chr20 50233408 50233549 -16434456 + MLT1A1 LTR MaLR 4 150 -215 1487 181 0 0 chr20 50233552 50233800 -16434205 + AluJb SINE Alu 2 249 -63 871 256 37 34 chr20 50233817 50234138 -16433867 - L1MD3 LINE L1 0 7995 7674 2170 119 0 0 chr20 50234142 50234452 -16433553 - AluSx SINE Alu -2 310 1 983 166 74 0 chr20 50234508 50234671 -16433334 - FAM SINE Alu 0 175 1 21 36 0 0 chr20 50234691 50234719 -16433286 + AT_rich Low_complexity Low_complexity 1 28 0 290 140 0 0 chr20 50234735 50234785 -16433220 - Alu SINE Alu 0 302 253 368 174 14 29 chr20 50234786 50234855 -16433150 - AluSg/x SINE Alu -113 187 120 2524 27 0 7 chr20 50235086 50235385 -16432620 - AluY SINE Alu -14 297 1 301 291 68 8 chr20 50235387 50235572 -16432433 + L1MC/D LINE L1 5607 5799 -322 195 42 0 0 chr20 50235589 50235613 -16432392 + (A)n Simple_repeat Simple_repeat 1 24 0 2159 104 7 0 chr20 50235614 50235912 -16432093 + AluSx SINE Alu 1 300 -12 825 143 51 120 chr20 50235966 50236130 -16431875 + MER3 DNA MER1_type 2 149 -60 698 200 0 0 chr20 50236130 50236255 -16431750 - FLAM_A SINE Alu -8 125 1 825 143 51 120 chr20 50236255 50236306 -16431699 + MER3 DNA MER1_type 149 202 -7 21 57 0 0 chr20 50236374 50236409 -16431596 + AT_rich Low_complexity Low_complexity 1 35 0 2077 121 0 0 chr20 50236471 50236768 -16431237 - AluSg SINE Alu -13 297 1 2203 103 3 0 chr20 50237061 50237363 -16430642 - AluSp SINE Alu -10 303 1 245 258 81 0 chr20 50237443 50237505 -16430500 + L2 LINE L2 3186 3252 -20 2050 87 33 30 chr20 50237822 50238121 -16429884 - AluSx SINE Alu -12 300 1 223 232 36 0 chr20 50238465 50238521 -16429484 + MER91B DNA MER1_type 31 88 -102 426 278 141 70 chr20 50238780 50239021 -16428984 + MIR SINE MIR 1 258 -4 1598 133 38 63 chr20 50239021 50239338 -16428667 + AluJo SINE Alu 2 310 -2 2137 97 10 0 chr20 50239400 50239698 -16428307 - AluSg SINE Alu -9 301 1 333 0 0 0 chr20 50240031 50240068 -16427937 + (TG)n Simple_repeat Simple_repeat 2 38 0 2075 103 0 17 chr20 50240068 50240221 -16427784 - AluSq SINE Alu -27 286 139 1962 130 7 0 chr20 50240221 50240522 -16427483 - AluSg SINE Alu -7 303 1 2075 103 0 17 chr20 50240522 50240659 -16427346 - AluSq SINE Alu -174 139 1 571 150 30 10 chr20 50240762 50240862 -16427143 + U6 snRNA snRNA 2 103 -4 388 301 82 22 chr20 50240866 50240945 -16427060 - L2 LINE L2 -17 3296 3223 2063 133 0 0 chr20 50240945 50241246 -16426759 - AluSg SINE Alu -9 301 1 388 301 82 22 chr20 50241246 50241349 -16426656 - L2 LINE L2 -90 3223 3103 865 255 205 33 chr20 50241364 50241681 -16426324 + MLT1G LTR MaLR 11 272 -318 2170 93 3 3 chr20 50241681 50241983 -16426022 - AluSx SINE Alu -10 302 1 865 255 205 33 chr20 50241983 50242152 -16425853 + MLT1G LTR MaLR 272 581 -9 1800 152 0 0 chr20 50242169 50242486 -16425519 + AluSx SINE Alu 1 317 0 784 280 138 23 chr20 50242486 50243063 -16424942 - L2 LINE L2 -203 3110 2470 424 236 257 7 chr20 50243092 50243232 -16424773 + MER5A DNA MER1_type 9 183 -6 245 243 14 43 chr20 50243244 50243314 -16424691 - MER5B DNA MER1_type -2 176 109 441 82 16 0 chr20 50243440 50243501 -16424504 + U7 snRNA snRNA 2 63 0 38 0 0 0 chr20 50243508 50243546 -16424459 + AT_rich Low_complexity Low_complexity 1 38 0 2147 92 0 0 chr20 50243548 50243832 -16424173 + AluSx SINE Alu 16 299 -13 717 174 0 0 chr20 50243832 50243947 -16424058 - FLAM_A SINE Alu -18 115 1 1900 110 3 55 chr20 50243999 50244309 -16423696 - AluSx SINE Alu -4 308 15 502 237 93 7 chr20 50244560 50244699 -16423306 + MER117 DNA MER1_type 4 154 -43 2281 59 24 3 chr20 50244821 50245111 -16422894 - AluSq SINE Alu -17 296 1 377 243 100 13 chr20 50245407 50245532 -16422473 + L1MD2 LINE L1 6026 6140 -204 2076 102 42 0 chr20 50245584 50245868 -16422137 + AluSg SINE Alu 2 297 -13 257 253 10 0 chr20 50246050 50246149 -16421856 - MER113 DNA MER1_type? -401 120 21 1758 166 0 19 chr20 50246175 50246489 -16421516 + AluJo SINE Alu 1 308 -4 534 153 0 0 chr20 50246580 50246678 -16421327 + L1MB4 LINE L1 6082 6179 -1 2014 110 0 42 chr20 50246715 50247023 -16420982 + AluSp SINE Alu 3 297 -16 2416 58 3 10 chr20 50247132 50247445 -16420560 + AluY SINE Alu 1 311 0 2035 115 0 3 chr20 50247487 50247783 -16420222 - AluSq SINE Alu -8 305 11 2136 117 0 3 chr20 50247872 50248170 -16419835 - AluSx SINE Alu -15 297 1 1081 213 68 8 chr20 50248287 50248536 -16419469 + L1MD3 LINE L1 7732 7995 0 767 234 58 11 chr20 50249793 50249981 -16418024 + MIR SINE MIR 5 201 -61 186 254 0 0 chr20 50250024 50250091 -16417914 + (TG)n Simple_repeat Simple_repeat 2 68 0 1954 115 4 0 chr20 50250458 50250737 -16417268 + AluSx SINE Alu 1 280 -32 294 29 0 0 chr20 50250737 50250772 -16417233 + (TAAA)n Simple_repeat Simple_repeat 1 35 0 1000 140 12 0 chr20 50250775 50250939 -16417066 + AluSg/x SINE Alu 134 299 -11 1135 246 114 59 chr20 50250944 50251539 -16416466 + L2 LINE L2 2352 3035 -278 2164 101 0 3 chr20 50251539 50251837 -16416168 + AluSx SINE Alu 5 301 -11 1135 246 114 59 chr20 50251837 50252133 -16415872 + L2 LINE L2 3035 3313 0 198 291 18 0 chr20 50252194 50252249 -16415756 + L2 LINE L2 3211 3266 -6 2237 84 10 7 chr20 50252324 50252634 -16415371 + AluSp SINE Alu 2 312 -1 1665 173 3 23 chr20 50252684 50252991 -16415014 + AluJo SINE Alu 11 311 -1 364 193 64 34 chr20 50253004 50253128 -16414877 - MLT1H LTR MaLR -6 618 415 1209 153 22 26 chr20 50253547 50253776 -16414229 - AluJo SINE Alu -2 310 83 225 0 0 0 chr20 50253969 50253994 -16414011 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 1933 114 21 0 chr20 50254049 50254330 -16413675 - AluSx SINE Alu -25 287 1 2461 28 0 0 chr20 50254419 50254752 -16413253 + AluY SINE Alu 1 333 0 741 158 18 0 chr20 50254842 50254956 -16413049 + FLAM_C SINE Alu 2 117 -26 1631 141 19 60 chr20 50255016 50255335 -16412670 + AluJo SINE Alu 2 307 -5 2113 123 3 0 chr20 50255388 50255696 -16412309 - AluSx SINE Alu -3 309 1 2214 102 0 0 chr20 50255725 50256020 -16411985 + AluSp SINE Alu 1 295 -18 250 245 75 57 chr20 50256039 50256145 -16411860 + L1MC4 LINE L1 7628 7735 -307 2142 94 0 3 chr20 50257616 50257903 -16410102 - AluSc SINE Alu -22 287 2 794 251 67 0 chr20 50258113 50258308 -16409697 + MER58A DNA MER1_type 1 208 -16 380 366 46 8 chr20 50258312 50258443 -16409562 + MIR SINE MIR 17 152 -110 722 158 17 188 chr20 50258447 50258562 -16409443 - MIR SINE MIR 0 262 129 2117 80 14 0 chr20 50258562 50258837 -16409168 + AluSx SINE Alu 3 281 -31 1885 118 31 24 chr20 50258837 50259125 -16408880 - AluSg SINE Alu -17 293 3 722 158 17 188 chr20 50259125 50259248 -16408757 - MIR SINE MIR -131 131 64 196 323 0 43 chr20 50259252 50259345 -16408660 + MIR SINE MIR 161 249 -13 616 180 281 0 chr20 50259359 50259498 -16408507 + FAM SINE Alu 1 48 -1 308 193 128 55 chr20 50259936 50260045 -16407960 - L1ME4a LINE L1 -1 6120 6004 2232 70 0 10 chr20 50260047 50260345 -16407660 - AluSc SINE Alu -14 295 1 1986 131 0 16 chr20 50261158 50261492 -16406513 + AluSq SINE Alu 1 313 0 1135 86 6 6 chr20 50261492 50261654 -16406351 + AluSg/x SINE Alu 134 295 -17 743 246 21 21 chr20 50261686 50261877 -16406128 + MIR SINE MIR 31 221 -41 562 196 184 82 chr20 50261883 50262128 -16405877 + MER46C DNA MER2_type 31 300 -38 193 347 41 58 chr20 50262202 50262323 -16405682 - MIR SINE MIR -71 191 73 878 124 6 96 chr20 50262408 50262621 -16405384 + AluJb SINE Alu 120 316 0 1861 88 10 51 chr20 50262625 50262942 -16405063 - AluSx SINE Alu 0 305 1 700 206 161 35 chr20 50263051 50263250 -16404755 - MIR SINE MIR -1 261 38 398 254 119 23 chr20 50263379 50263556 -16404449 + L1ME LINE L1 5625 5818 -303 1610 146 49 17 chr20 50263568 50263855 -16404150 + AluJo SINE Alu 1 296 -16 272 128 0 0 chr20 50263858 50263897 -16404108 + MER66B LTR ERV1 295 333 -153 194 0 39 0 chr20 50263928 50263954 -16404051 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 1370 161 111 43 chr20 50264024 50264161 -16403844 + AluSx SINE Alu 1 127 -175 1859 94 64 0 chr20 50264161 50264470 -16403535 + AluSq SINE Alu 1 326 0 1370 161 111 43 chr20 50264470 50264611 -16403394 + AluSx SINE Alu 127 299 -3 685 140 0 0 chr20 50264625 50264718 -16403287 + AluSg/x SINE Alu 194 286 -24 248 204 0 0 chr20 50264724 50264768 -16403237 + Cheshire DNA MER1_type 850 893 -1527 * 315 138 0 184 chr20 50264766 50264793 -16403212 + MER58 DNA MER1_type 2350 2380 -40 2204 105 0 0 chr20 50264793 50265098 -16402907 - AluSg SINE Alu -5 305 1 315 138 0 184 chr20 50265098 50265157 -16402848 + MER58 DNA MER1_type 2380 2420 0 429 208 32 48 chr20 50265181 50265306 -16402699 - MLT1E2 LTR MaLR -456 170 48 * 1270 198 68 25 chr20 50265299 50265622 -16402383 + MLT1D LTR MaLR 169 505 0 186 103 0 0 chr20 50265743 50265772 -16402233 - L2 LINE L2 0 3313 3285 1913 132 0 25 chr20 50265778 50266096 -16401909 + AluSx SINE Alu 1 310 -2 185 326 131 39 chr20 50266110 50266392 -16401613 - L2 LINE L2 -15 3257 2950 440 196 21 31 chr20 50266494 50266756 -16401249 + GA-rich Low_complexity Low_complexity 1 264 -647 1869 121 6 46 chr20 50266756 50266894 -16401111 + AluSx SINE Alu 1 143 -169 2065 101 26 3 chr20 50266894 50267200 -16400805 + AluSq SINE Alu 1 313 0 1869 121 6 46 chr20 50267200 50267384 -16400621 + AluSx SINE Alu 143 310 -2 440 196 21 31 chr20 50267384 50267415 -16400590 + GA-rich Low_complexity Low_complexity 264 911 0 857 199 52 70 chr20 50267693 50267740 -16400265 + L1MB7 LINE L1 5903 5949 -235 2026 114 0 47 chr20 50267740 50268057 -16399948 - AluJb SINE Alu -10 302 1 857 199 52 70 chr20 50268057 50268296 -16399709 + L1MB7 LINE L1 5949 6184 0 1854 145 0 3 chr20 50268337 50268640 -16399365 - AluJb SINE Alu 0 303 2 315 300 0 0 chr20 50268706 50268786 -16399219 - L2 LINE L2 -2 3311 3232 771 215 0 90 chr20 50268788 50269011 -16398994 - MLT1D LTR MaLR -302 203 1 534 303 34 6 chr20 50269070 50269248 -16398757 - MIR SINE MIR -55 207 25 211 226 57 0 chr20 50269505 50269558 -16398447 - L2 LINE L2 -2 3311 3256 2080 92 41 0 chr20 50270527 50270821 -16397184 + AluSg SINE Alu 1 306 -4 1253 97 6 0 chr20 50270821 50270997 -16397008 + AluSg/x SINE Alu 132 308 -2 2309 64 7 3 chr20 50271001 50271296 -16396709 + AluY SINE Alu 1 296 -15 522 287 51 6 chr20 50271332 50271489 -16396516 + MIR SINE MIR 98 261 -1 1685 140 10 46 chr20 50271995 50272302 -16395703 - AluSx SINE Alu -13 299 4 831 123 8 23 chr20 50273888 50274018 -16393987 - FLAM_C SINE Alu -5 128 1 2178 75 3 30 chr20 50274028 50274333 -16393672 - AluY SINE Alu -14 297 1 677 172 57 8 chr20 50274361 50274483 -16393522 + FLAM_A SINE Alu 1 128 -5 477 200 138 46 chr20 50274663 50274687 -16393318 + L1MD3 LINE L1 7773 7793 -202 2213 94 3 3 chr20 50274687 50274986 -16393019 + AluSg SINE Alu 1 299 -11 477 200 138 46 chr20 50274986 50275156 -16392849 + L1MD3 LINE L1 7793 7985 -10 2019 127 0 0 chr20 50275399 50275691 -16392314 - AluSx SINE Alu -15 297 6 315 191 0 48 chr20 50275711 50275774 -16392231 - Alu SINE Alu -4 298 239 2371 87 0 3 chr20 50275783 50276094 -16391911 - AluSx SINE Alu -2 310 1 2233 103 0 0 chr20 50276099 50276400 -16391605 - AluSg SINE Alu -7 303 3 2153 94 0 13 chr20 50276722 50277029 -16390976 + AluY SINE Alu 1 303 -8 1269 217 90 3 chr20 50277163 50277463 -16390542 - MER58B DNA MER1_type -15 326 1 251 277 23 39 chr20 50277485 50277615 -16390390 - L1ME LINE L1 -352 5810 5683 233 279 139 12 chr20 50277902 50277988 -16390017 - MIR SINE MIR -41 221 125 1695 183 80 74 chr20 50278102 50278205 -16389800 + MLT1D LTR MaLR 1 102 -403 2160 110 0 0 chr20 50278205 50278505 -16389500 - AluSx SINE Alu -12 300 1 1695 183 80 74 chr20 50278505 50278823 -16389182 + MLT1D LTR MaLR 102 417 -88 1903 65 69 31 chr20 50278823 50279113 -16388892 + AluY SINE Alu 1 301 -10 1695 183 80 74 chr20 50279113 50279135 -16388870 + MLT1D LTR MaLR 417 437 -68 2368 52 0 19 chr20 50279135 50279442 -16388563 - AluY SINE Alu -10 301 1 1695 183 80 74 chr20 50279442 50279498 -16388507 + MLT1D LTR MaLR 437 505 0 1678 161 3 26 chr20 50279557 50279867 -16388138 + AluJo SINE Alu 1 303 -9 1868 148 30 0 chr20 50280161 50280459 -16387546 + AluSx SINE Alu 1 307 -5 1911 103 3 56 chr20 50280833 50281153 -16386852 - AluY SINE Alu -8 303 1 2393 72 0 0 chr20 50281160 50281465 -16386540 - AluY SINE Alu -5 306 2 1005 165 0 0 chr20 50281684 50281871 -16386134 - AluJb SINE Alu 0 312 134 2064 114 10 0 chr20 50281871 50282170 -16385835 - AluSq SINE Alu -11 302 1 835 125 15 0 chr20 50282174 50282310 -16385695 - L1MB5 LINE L1 0 6174 6037 2155 124 0 6 chr20 50282738 50283053 -16384952 + AluSq SINE Alu 1 313 0 301 269 24 48 chr20 50283060 50283227 -16384778 + HAL1 LINE L1 2259 2421 -86 1560 73 0 32 chr20 50283321 50283540 -16384465 + AluSg SINE Alu 1 212 -98 1014 77 0 21 chr20 50283557 50283700 -16384305 + AluSc SINE Alu 170 309 0 602 219 20 55 chr20 50283765 50283911 -16384094 + MER5B DNA MER1_type 35 175 -3 205 257 50 86 chr20 50283786 50283926 -16384079 - MER5A DNA MER1_type -50 139 5 * 878 190 125 5 chr20 50284184 50284368 -16383637 - AluJb SINE Alu -22 290 85 21 0 0 0 chr20 50284376 50284397 -16383608 + AT_rich Low_complexity Low_complexity 1 21 0 999 276 74 34 chr20 50284531 50284673 -16383332 - MLT1L LTR MaLR -7 608 473 2188 100 0 0 chr20 50284673 50284974 -16383031 - AluSx SINE Alu -7 305 5 999 276 74 34 chr20 50284974 50285277 -16382728 - MLT1L LTR MaLR -142 473 145 288 0 0 0 chr20 50285287 50285319 -16382686 + (TG)n Simple_repeat Simple_repeat 2 33 0 25 51 0 0 chr20 50285464 50285503 -16382502 + AT_rich Low_complexity Low_complexity 1 39 0 2114 113 0 0 chr20 50285569 50285869 -16382136 + AluSx SINE Alu 1 300 -12 402 305 60 39 chr20 50285875 50286196 -16381809 + L1MC/D LINE L1 4883 5240 -906 903 260 146 41 chr20 50286206 50286644 -16381361 + L1MC/D LINE L1 5255 5738 -2070 2031 111 10 14 chr20 50286647 50286944 -16381061 + AluSx SINE Alu 3 298 -14 1907 85 96 0 chr20 50287165 50287446 -16380559 - AluSx SINE Alu -4 308 1 457 273 16 16 chr20 50288194 50288315 -16379690 - MIR SINE MIR -66 196 76 2254 100 3 0 chr20 50288375 50288684 -16379321 - AluSx SINE Alu -2 310 1 1334 182 32 8 chr20 50288748 50288995 -16379010 + AluJo SINE Alu 4 256 -56 812 97 0 8 chr20 50289068 50289192 -16378813 + L1 LINE L1 4423 4545 -1601 276 297 11 22 chr20 50289256 50289347 -16378658 - L1MC/D LINE L1 -2145 5663 5574 321 262 12 0 chr20 50289350 50289434 -16378571 + L1MC/D LINE L1 5744 5828 -1980 331 65 0 0 chr20 50289435 50289481 -16378524 - MADE1 DNA Mariner -34 46 1 244 192 231 26 chr20 50289761 50289839 -16378166 - MIR3 SINE MIR -5 203 110 2216 106 0 3 chr20 50290093 50290404 -16377601 - AluSg SINE Alu 0 310 1 1796 88 66 15 chr20 50290602 50290874 -16377131 + AluSq SINE Alu 10 295 -18 2289 63 3 20 chr20 50290990 50291292 -16376713 - AluY SINE Alu -14 297 1 824 181 0 0 chr20 50291449 50291582 -16376423 + FLAM_A SINE Alu 1 133 0 2299 84 0 0 chr20 50291620 50291918 -16376087 - AluSc SINE Alu -1 308 11 1929 131 3 16 chr20 50291933 50292239 -16375766 - AluSx SINE Alu -10 302 1 464 344 37 5 chr20 50292383 50292598 -16375407 + L2 LINE L2 2867 3088 -184 2132 112 7 0 chr20 50292720 50293024 -16374981 - AluSq SINE Alu -7 306 1 2051 119 14 0 chr20 50293033 50293327 -16374678 - AluSx SINE Alu -14 298 1 3268 110 26 0 chr20 50293328 50293783 -16374222 + MER57-int LTR ERV1 5744 6210 -1327 2205 106 0 6 chr20 50293784 50294096 -16373909 - AluSx SINE Alu -2 310 1 1018 160 6 11 chr20 50294308 50294489 -16373516 + L1MA4A LINE L1 6004 6183 -120 2144 101 0 3 chr20 50294528 50294824 -16373181 - AluSg SINE Alu -15 295 1 680 172 15 30 chr20 50294968 50295102 -16372903 - FLAM_A SINE Alu 0 133 2 332 329 62 52 chr20 50295102 50295207 -16372798 - L1MC4a LINE L1 -1917 5891 5788 2194 108 0 0 chr20 50295207 50295504 -16372501 - AluSg SINE Alu -13 297 1 332 329 62 52 chr20 50295504 50295608 -16372397 - L1MC4a LINE L1 -2020 5788 5680 2091 112 0 0 chr20 50295632 50295927 -16372078 - AluSx SINE Alu -17 295 1 2134 114 0 7 chr20 50295939 50296238 -16371767 - AluSx SINE Alu -33 279 1 211 234 0 16 chr20 50296334 50296398 -16371607 + T-rich Low_complexity Low_complexity 1 63 0 464 317 19 6 chr20 50296731 50297031 -16370974 + L1MC4a LINE L1 5671 5894 -408 246 272 0 33 chr20 50298110 50298202 -16369803 - L1MC5 LINE L1 -36 7925 7837 2136 99 28 0 chr20 50299294 50299598 -16368407 - AluSg SINE Alu 0 310 1 240 257 146 42 chr20 50299725 50299869 -16368136 + L1ME4a LINE L1 5961 6119 -2 551 91 69 11 chr20 50300041 50300410 -16367595 + (TA)n Simple_repeat Simple_repeat 1 390 0 202 171 0 0 chr20 50301075 50301116 -16366889 - MIR SINE MIR -74 188 148 2297 120 0 0 chr20 50301484 50301792 -16366213 - AluSq SINE Alu -4 309 2 224 370 14 14 chr20 50302222 50302360 -16365645 + L2 LINE L2 3153 3290 -23 2256 109 7 0 chr20 50302390 50302692 -16365313 - AluSx SINE Alu -8 304 1 2241 113 3 0 chr20 50303301 50303602 -16364403 + AluSq SINE Alu 1 302 -11 2311 71 40 3 chr20 50303680 50303976 -16364029 + AluY SINE Alu 2 308 -3 2072 129 14 0 chr20 50304109 50304395 -16363610 + AluSx SINE Alu 1 290 -22 2157 115 3 3 chr20 50304420 50304716 -16363289 + AluSx SINE Alu 1 296 -16 191 268 36 0 chr20 50305444 50305500 -16362505 + MIR SINE MIR 73 130 -132 250 263 40 30 chr20 50305593 50305692 -16362313 + L2 LINE L2 3209 3308 -5 261 0 0 0 chr20 50305744 50305773 -16362232 + (T)n Simple_repeat Simple_repeat 1 29 0 2652 23 7 3 chr20 50305790 50306092 -16361913 - AluY SINE Alu -8 303 1 2109 79 3 41 chr20 50306092 50306382 -16361623 - AluSp SINE Alu -34 279 1 526 299 19 19 chr20 50306410 50306624 -16361381 - L1ME LINE L1 -521 5649 5436 374 291 149 0 chr20 50306871 50307012 -16360993 + L2 LINE L2 3110 3271 -1 493 73 0 104 chr20 50307155 50307251 -16360754 - AluY SINE Alu 0 312 227 1248 100 0 6 chr20 50307251 50307411 -16360594 - AluY SINE Alu -151 160 2 1869 143 0 49 chr20 50307414 50307721 -16360284 - AluJb SINE Alu -20 292 1 184 269 19 0 chr20 50307739 50307791 -16360214 - L2 LINE L2 -4 3309 3257 2263 85 16 31 chr20 50307923 50308241 -16359764 + AluSp SINE Alu 1 313 0 256 289 12 0 chr20 50308289 50308372 -16359633 - MIR SINE MIR -9 253 170 2261 126 0 0 chr20 50309072 50309381 -16358624 - AluSx SINE Alu -3 309 1 233 130 87 0 chr20 50309456 50309502 -16358503 + L2 LINE L2 3258 3307 -6 2242 120 0 0 chr20 50309663 50309964 -16358041 - AluSg SINE Alu -9 301 1 26 50 0 0 chr20 50310082 50310122 -16357883 + AT_rich Low_complexity Low_complexity 1 40 0 854 294 57 55 chr20 50310523 50311036 -16356969 + L1MC4a LINE L1 5302 5815 -1993 2039 95 74 7 chr20 50311048 50311333 -16356672 + AluSx SINE Alu 1 304 -8 1905 172 3 0 chr20 50311346 50311649 -16356356 + AluJb SINE Alu 1 304 -8 479 256 40 74 chr20 50311663 50311839 -16356166 - MIR SINE MIR -32 230 61 248 233 0 27 chr20 50311841 50311914 -16356091 + L1MC4a LINE L1 5870 5940 -1868 2541 61 0 3 chr20 50311916 50312213 -16355792 + AluSc SINE Alu 1 296 -13 1715 161 0 74 chr20 50312228 50312564 -16355441 + AluJo SINE Alu 1 311 -1 228 179 0 18 chr20 50312564 50312620 -16355385 + (TA)n Simple_repeat Simple_repeat 2 56 0 255 245 0 51 chr20 50312620 50312718 -16355287 - L1MC4 LINE L1 -1337 6705 6613 25 31 0 0 chr20 50312956 50312988 -16355017 + AT_rich Low_complexity Low_complexity 1 32 0 244 182 182 0 chr20 50313069 50313135 -16354870 + MER33 DNA MER1_type 6 83 -241 1923 144 0 26 chr20 50313151 50313456 -16354549 + AluJb SINE Alu 9 305 -7 346 164 0 0 chr20 50313463 50313518 -16354487 + MER33 DNA MER1_type 73 127 -197 1144 80 130 6 chr20 50313528 50313690 -16354315 + AluSx SINE Alu 1 182 -130 1480 83 10 0 chr20 50313696 50313889 -16354116 + AluSp SINE Alu 117 311 -2 2144 133 0 3 chr20 50313903 50314203 -16353802 - AluSq SINE Alu -14 299 1 539 177 31 23 chr20 50314207 50314337 -16353668 + MER33 DNA MER1_type 147 277 -47 1130 120 15 131 chr20 50314337 50314425 -16353580 + L1MA4 LINE L1 5712 5809 -491 2225 135 0 0 chr20 50314425 50314737 -16353268 + AluSx SINE Alu 1 312 0 1130 120 15 131 chr20 50314737 50314907 -16353098 + L1MA4 LINE L1 5809 5940 -360 750 86 0 38 chr20 50314918 50315023 -16352982 - AluS SINE Alu -210 102 2 1822 156 3 7 chr20 50315304 50315592 -16352413 + AluJb SINE Alu 1 287 -25 408 20 0 0 chr20 50315592 50315641 -16352364 + (CCAA)n Simple_repeat Simple_repeat 2 50 0 336 284 22 89 chr20 50315771 50315978 -16352027 - MIR SINE MIR -3 259 67 2555 60 0 0 chr20 50315978 50316276 -16351729 - AluY SINE Alu -13 298 1 336 284 22 89 chr20 50316276 50316293 -16351712 - MIR SINE MIR -195 67 50 1144 245 69 79 chr20 50316338 50316578 -16351427 + MLT1D LTR MaLR 5 246 -259 3702 95 16 88 chr20 50316578 50317002 -16351003 + MER61E LTR ERV1 1 369 -200 2123 112 14 20 chr20 50317002 50317298 -16350707 + AluSp SINE Alu 1 294 -19 3702 95 16 88 chr20 50317298 50317486 -16350519 + MER61E LTR ERV1 369 569 0 1607 147 11 19 chr20 50317486 50317752 -16350253 + AluJb SINE Alu 49 312 0 1144 245 69 79 chr20 50317752 50317767 -16350238 + MLT1D LTR MaLR 245 259 -246 390 21 0 0 chr20 50317767 50317814 -16350191 + (CA)n Simple_repeat Simple_repeat 2 48 0 1144 245 69 79 chr20 50317814 50318062 -16349943 + MLT1D LTR MaLR 259 505 0 1061 146 75 61 chr20 50318201 50318413 -16349592 + MER20 DNA MER1_type 5 219 0 954 144 0 69 chr20 50318420 50318574 -16349431 + MER2 DNA MER2_type 1 143 -202 2230 117 0 0 chr20 50318574 50318872 -16349133 - AluSx SINE Alu -14 298 1 954 144 0 69 chr20 50318872 50318890 -16349115 + MER2 DNA MER2_type 143 161 -184 3227 127 62 2 chr20 50318892 50319363 -16348642 + MER1A DNA MER1_type 31 529 0 349 204 136 120 chr20 50319363 50319382 -16348623 + MER2 DNA MER2_type 152 169 -176 1796 136 0 8 chr20 50319382 50319640 -16348365 + AluSx SINE Alu 47 302 -10 349 204 136 120 chr20 50319640 50319811 -16348194 + MER2 DNA MER2_type 169 345 0 635 170 0 0 chr20 50319860 50319994 -16348011 + FLAM_C SINE Alu 18 151 0 500 257 0 43 chr20 50319997 50320137 -16347868 - MIR SINE MIR -71 191 58 1231 189 103 46 chr20 50320149 50320430 -16347575 - AluJo SINE Alu -5 297 1 2365 83 0 3 chr20 50320434 50320734 -16347271 - AluSc SINE Alu -10 299 1 1112 217 14 25 chr20 50320775 50321056 -16346949 - Charlie1b DNA MER1_type -198 325 48 400 248 51 60 chr20 50321154 50321388 -16346617 + MER113 DNA MER1_type? 1 232 -289 1289 182 13 13 chr20 50321394 50321625 -16346380 + AluJo SINE Alu 1 231 -81 689 202 84 6 chr20 50321641 50321819 -16346186 + MER113 DNA MER1_type? 203 394 -127 2495 68 0 0 chr20 50321844 50322138 -16345867 - AluY SINE Alu -17 294 1 27 29 0 0 chr20 50322138 50322172 -16345833 + AT_rich Low_complexity Low_complexity 1 34 0 1307 136 11 0 chr20 50322188 50322379 -16345626 - AluJb SINE Alu -119 193 1 237 240 13 40 chr20 50322387 50322462 -16345543 + MER113 DNA MER1_type? 439 511 -10 2396 82 7 3 chr20 50322885 50323190 -16344815 - AluSg SINE Alu -4 306 1 22 0 0 0 chr20 50323292 50323314 -16344691 + AT_rich Low_complexity Low_complexity 1 22 0 748 257 175 22 chr20 50323918 50324021 -16343984 - MLT1J LTR MaLR -42 469 383 2358 63 3 10 chr20 50324021 50324320 -16343685 - AluY SINE Alu -14 297 1 748 257 175 22 chr20 50324320 50324617 -16343388 - MLT1J LTR MaLR -128 383 8 2637 48 0 3 chr20 50324632 50324941 -16343064 + AluY SINE Alu 1 308 -3 2348 99 0 10 chr20 50324943 50325257 -16342748 + AluSx SINE Alu 1 311 -1 1756 188 0 7 chr20 50325266 50325575 -16342430 - AluJb SINE Alu -5 307 1 2155 116 7 0 chr20 50325691 50325984 -16342021 - AluSx SINE Alu -17 295 1 571 197 44 15 chr20 50325984 50326121 -16341884 - L2 LINE L2 -12 3301 3161 1716 163 25 31 chr20 50326137 50326463 -16341542 + MLT1A1 LTR MaLR 1 324 -41 757 212 7 14 chr20 50326476 50326622 -16341383 + AluJb SINE Alu 149 293 -19 312 180 0 0 chr20 50326622 50326672 -16341333 + MLT1A1 LTR MaLR 316 365 0 452 280 44 56 chr20 50326673 50326722 -16341283 - L2 LINE L2 -112 3201 3153 2301 109 30 0 chr20 50326722 50327025 -16340980 - AluSx SINE Alu 0 312 1 452 280 44 56 chr20 50327025 50327446 -16340559 - L2 LINE L2 -160 3153 2733 2301 122 0 0 chr20 50327627 50327931 -16340074 - AluSx SINE Alu -6 306 3 674 248 126 0 chr20 50328013 50328235 -16339770 - MIR SINE MIR -11 251 2 2241 117 7 0 chr20 50328388 50328687 -16339318 - AluSx SINE Alu -11 301 1 450 266 194 18 chr20 50328917 50329139 -16338866 + MIR SINE MIR 1 261 -1 1592 166 70 15 chr20 50329742 50330013 -16337992 - AluJb SINE Alu -26 286 1 2353 106 3 0 chr20 50330225 50330536 -16337469 + AluSp SINE Alu 1 312 -1 238 272 12 0 chr20 50330550 50330631 -16337374 - L1ME LINE L1 -269 5852 5771 180 296 40 75 chr20 50330763 50330962 -16337043 - L2 LINE L2 -4 3309 3118 702 259 38 38 chr20 50331223 50331459 -16336546 + MIR SINE MIR 6 241 -21 858 186 41 64 chr20 50331496 50331716 -16336289 - MER20 DNA MER1_type -4 215 1 1657 189 7 17 chr20 50331748 50332045 -16335960 + AluJb SINE Alu 1 294 -18 1777 120 7 33 chr20 50332090 50332364 -16335641 + AluSx SINE Alu 25 291 -21 29 47 0 0 chr20 50332384 50332427 -16335578 + AT_rich Low_complexity Low_complexity 1 43 0 2209 106 3 0 chr20 50332517 50332801 -16335204 - AluSg SINE Alu -25 285 1 1025 129 0 13 chr20 50332834 50332989 -16335016 + AluJb SINE Alu 159 311 -1 2296 108 0 0 chr20 50333017 50333312 -16334693 - AluSg SINE Alu -15 295 1 1434 173 16 0 chr20 50333314 50333557 -16334448 + Tigger3(Golem) DNA MER2_type 2752 2998 -31 252 164 0 0 chr20 50333794 50333861 -16334144 + (TG)n Simple_repeat Simple_repeat 2 68 0 234 152 0 0 chr20 50333879 50333912 -16334093 - Tigger3(Golem) DNA MER2_type -2996 33 1 621 274 56 0 chr20 50334433 50334630 -16333375 - MIR SINE MIR -34 228 21 2583 118 33 18 chr20 50334690 50335153 -16332852 - MER1A DNA MER1_type 0 529 1 674 222 68 23 chr20 50335158 50335334 -16332671 + MER20 DNA MER1_type 36 219 0 452 90 0 0 chr20 50335627 50335694 -16332311 - AluJo SINE Alu -6 306 240 2212 120 67 0 chr20 50335697 50336038 -16331967 - THE1B LTR MaLR 0 364 1 1773 137 0 4 chr20 50336038 50336279 -16331726 - AluJo SINE Alu -72 240 1 738 288 40 51 chr20 50336330 50336483 -16331522 + L2 LINE L2 2935 3088 -225 2288 85 0 20 chr20 50336483 50336777 -16331228 - AluSc SINE Alu -21 288 1 738 288 40 51 chr20 50336777 50336994 -16331011 + L2 LINE L2 3088 3301 -12 1505 117 195 8 chr20 50336997 50337253 -16330752 + AluSg1 SINE Alu 1 304 -5 1864 138 38 0 chr20 50337393 50337684 -16330321 - AluJb SINE Alu -10 302 1 313 268 71 0 chr20 50337760 50337872 -16330133 - L1ME LINE L1 -402 5719 5600 196 195 0 0 chr20 50337970 50338011 -16329994 - MIR SINE MIR -44 218 178 2166 118 23 0 chr20 50338087 50338392 -16329613 - AluSq SINE Alu -1 312 1 607 296 14 33 chr20 50338392 50338605 -16329400 - MIR SINE MIR -48 214 6 326 250 12 0 chr20 50338612 50338692 -16329313 - MIR SINE MIR -91 171 91 264 202 36 48 chr20 50338695 50338779 -16329226 - L1ME LINE L1 -2320 5488 5406 2530 31 0 3 chr20 50338878 50339222 -16328783 + AluY SINE Alu 1 343 0 2271 75 3 30 chr20 50339324 50339619 -16328386 + AluSp SINE Alu 11 297 -16 857 191 6 29 chr20 50339645 50339818 -16328187 - AluJo SINE Alu -142 170 2 2131 60 0 15 chr20 50339823 50340088 -16327917 - AluY SINE Alu -11 300 40 1158 169 72 8 chr20 50340205 50340454 -16327551 + L1MD3 LINE L1 7730 7994 -1 277 119 0 45 chr20 50340879 50340946 -16327059 + (TTA)n Simple_repeat Simple_repeat 2 65 0 485 273 0 17 chr20 50343146 50343322 -16324683 - MER104 DNA MER2_type -3 177 5 1706 171 3 10 chr20 50343898 50344196 -16323809 + AluJo SINE Alu 1 296 -16 204 236 0 18 chr20 50344248 50344303 -16323702 + MIR SINE MIR 45 98 -164 2147 123 0 3 chr20 50344678 50344987 -16323018 - AluSx SINE Alu 0 308 1 428 122 244 11 chr20 50345369 50345459 -16322546 + MER96B DNA MER1_type? 1 111 -306 311 211 221 0 chr20 50345459 50345563 -16322442 + MIR SINE MIR 64 190 -72 983 168 89 11 chr20 50345563 50345753 -16322252 - MER46A DNA MER2_type -1 235 31 256 167 0 19 chr20 50345795 50345849 -16322156 + MER96B DNA MER1_type? 130 182 -235 2405 49 3 10 chr20 50346017 50346305 -16321700 + AluY SINE Alu 1 286 -25 284 0 28 0 chr20 50346308 50346344 -16321661 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2156 114 3 0 chr20 50346351 50346640 -16321365 + AluSx SINE Alu 1 290 -22 2268 123 3 0 chr20 50346643 50346945 -16321060 + AluSx SINE Alu 1 303 -9 540 255 87 19 chr20 50346964 50347125 -16320880 + MIR SINE MIR 21 192 -70 2023 150 7 0 chr20 50347303 50347596 -16320409 + AluJo SINE Alu 1 295 -17 1171 144 6 0 chr20 50347708 50347875 -16320130 - AluJb SINE Alu -144 168 1 253 190 25 51 chr20 50347928 50348007 -16319998 - L1MC5 LINE L1 -49 7912 7836 1165 138 31 5 chr20 50348070 50348266 -16319739 + L1MA5A LINE L1 6078 6278 -19 2519 78 0 7 chr20 50348327 50348635 -16319370 + AluSq SINE Alu 1 306 -7 186 43 0 0 chr20 50349556 50349579 -16318426 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 244 269 46 28 chr20 50350802 50350910 -16317095 - MIR SINE MIR -5 257 148 203 250 132 0 chr20 50351112 50351180 -16316825 - MIR SINE MIR -119 143 67 736 286 123 16 chr20 50351369 50351847 -16316158 - L2 LINE L2 -1 3312 2782 1688 146 6 77 chr20 50352097 50352118 -16315887 - AluJb SINE Alu 0 312 291 2382 59 38 3 chr20 50352118 50352406 -16315599 + AluY SINE Alu 1 298 -13 1688 146 6 77 chr20 50352406 50352585 -16315420 - AluJb SINE Alu -21 291 143 2150 119 0 0 chr20 50352585 50352871 -16315134 + AluSx SINE Alu 3 288 -24 1688 146 6 77 chr20 50352871 50353005 -16315000 - AluJb SINE Alu -169 143 1 342 0 0 0 chr20 50354073 50354111 -16313894 + (CA)n Simple_repeat Simple_repeat 2 39 0 2235 88 3 3 chr20 50354976 50355305 -16312700 + AluSx SINE Alu 1 329 0 21 36 0 0 chr20 50355663 50355691 -16312314 + AT_rich Low_complexity Low_complexity 1 28 0 281 273 119 28 chr20 50355703 50355846 -16312159 - MIR SINE MIR -20 242 87 2306 105 0 0 chr20 50355867 50356163 -16311842 - AluSx SINE Alu -16 296 1 366 234 37 152 chr20 50356191 50356460 -16311545 + MER102b DNA MER1_type 103 340 -1 363 44 0 0 chr20 50356552 50356597 -16311408 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 522 256 181 0 chr20 50356678 50356877 -16311128 + MIR SINE MIR 24 258 -4 1921 126 42 7 chr20 50356904 50357189 -16310816 + AluSq SINE Alu 1 295 -18 628 192 122 23 chr20 50357200 50357372 -16310633 + L1MD3 LINE L1 7796 7984 -11 1998 100 107 4 chr20 50357379 50357659 -16310346 + AluSc SINE Alu 1 309 0 427 318 14 31 chr20 50357957 50358121 -16309884 + MIR SINE MIR 10 169 -63 2247 104 7 0 chr20 50358165 50358454 -16309551 + AluSp SINE Alu 1 291 -22 2029 139 0 0 chr20 50358547 50358848 -16309157 + AluSx SINE Alu 1 301 0 479 219 149 0 chr20 50358981 50359095 -16308910 + MER69 DNA AcHobo 17 147 -1079 284 170 21 0 chr20 50359122 50359169 -16308836 + MER69 DNA AcHobo 2476 2523 -3 200 318 24 0 chr20 50359296 50359381 -16308624 + MIR SINE MIR 61 147 -115 595 261 96 64 chr20 50359826 50359948 -16308057 + MIR SINE MIR 2 119 -143 1770 92 125 21 chr20 50359948 50360229 -16307776 + AluYa8 SINE Alu 1 310 0 595 261 96 64 chr20 50360229 50360355 -16307650 + MIR SINE MIR 119 258 -4 2206 136 0 3 chr20 50360392 50360702 -16307303 - AluSx SINE Alu -3 309 1 2430 90 0 0 chr20 50360732 50361043 -16306962 - AluY SINE Alu 0 311 1 201 195 0 0 chr20 50361112 50361153 -16306852 + (TATG)n Simple_repeat Simple_repeat 4 44 0 299 287 114 21 chr20 50361156 50361532 -16306473 - L1M4 LINE L1 -2653 3493 3083 2433 65 0 3 chr20 50361596 50361888 -16306117 - AluSg SINE Alu -10 300 10 182 200 0 0 chr20 50361951 50361986 -16306019 + MIR SINE MIR 110 144 -118 930 203 11 6 chr20 50362148 50362325 -16305680 - MER45A DNA AcHobo 0 178 1 249 292 56 0 chr20 50363071 50363160 -16304845 - MIR SINE MIR -158 104 11 2143 148 0 3 chr20 50363177 50363480 -16304525 + AluJb SINE Alu 1 302 -10 2099 102 3 54 chr20 50363604 50363918 -16304087 - AluSp SINE Alu -15 298 1 256 282 64 0 chr20 50363925 50364003 -16304002 - MIR SINE MIR -106 156 74 2531 61 0 0 chr20 50364060 50364355 -16303650 - AluY SINE Alu -16 295 1 2281 116 0 10 chr20 50364908 50365218 -16302787 - AluSg SINE Alu -3 307 1 512 100 9 0 chr20 50365542 50365618 -16302387 + L1MB1 LINE L1 5754 5837 -352 2182 126 7 0 chr20 50365618 50365927 -16302078 + AluSx SINE Alu 1 311 -1 512 100 9 0 chr20 50365927 50365941 -16302064 + L1MB1 LINE L1 5837 5849 -340 348 203 47 86 chr20 50366428 50366505 -16301500 + Charlie5 DNA MER1_type 5 77 -2547 2172 103 17 3 chr20 50366505 50366805 -16301200 - AluSx SINE Alu -8 304 1 348 203 47 86 chr20 50366805 50366855 -16301150 + Charlie5 DNA MER1_type 77 127 -2497 1208 173 9 77 chr20 50366919 50367132 -16300873 + Charlie5 DNA MER1_type 2238 2423 -201 2592 44 0 0 chr20 50367132 50367427 -16300578 - AluY SINE Alu -16 295 1 1208 173 9 77 chr20 50367427 50367537 -16300468 + Charlie5 DNA MER1_type 2423 2539 -85 684 241 0 0 chr20 50367538 50367679 -16300326 - FLAM_A SINE Alu -1 141 1 254 182 14 84 chr20 50367761 50367880 -16300125 + A-rich Low_complexity Low_complexity 4 113 -23 2269 119 6 0 chr20 50367880 50368191 -16299814 + AluSq SINE Alu 1 313 0 254 182 14 84 chr20 50368191 50368214 -16299791 + A-rich Low_complexity Low_complexity 113 136 0 342 138 0 0 chr20 50368235 50368293 -16299712 + (TCC)n Simple_repeat Simple_repeat 3 60 0 600 210 0 36 chr20 50368295 50368433 -16299572 - FLAM_A SINE Alu 0 133 1 274 167 0 17 chr20 50368433 50368493 -16299512 + Charlie5 DNA MER1_type 2494 2552 -60 978 180 0 12 chr20 50368498 50368665 -16299340 + AluJo SINE Alu 123 287 -25 211 172 17 17 chr20 50368683 50368741 -16299264 + A-rich Low_complexity Low_complexity 4 61 0 385 172 43 11 chr20 50368741 50368834 -16299171 + Charlie5 DNA MER1_type 2508 2603 -9 1871 121 62 17 chr20 50368835 50369125 -16298880 - AluJo SINE Alu -9 303 1 287 266 199 41 chr20 50369174 50369445 -16298560 + L2 LINE L2 2995 3308 -5 207 0 0 0 chr20 50369740 50369763 -16298242 + (A)n Simple_repeat Simple_repeat 1 23 0 2339 102 0 0 chr20 50370953 50371248 -16296757 + AluSx SINE Alu 1 295 -17 1545 282 58 6 chr20 50371663 50372146 -16295859 - MLT1J LTR MaLR -3 508 1 2162 99 76 17 chr20 50372206 50372550 -16295455 + THE1B LTR MaLR 1 364 0 2297 96 0 13 chr20 50372785 50373086 -16294919 - AluSg1 SINE Alu -12 297 1 227 267 78 11 chr20 50373223 50373313 -16294692 - MIR SINE MIR -24 238 143 1652 110 4 9 chr20 50373313 50373541 -16294464 - AluSg/x SINE Alu -20 292 66 455 183 69 53 chr20 50373544 50373675 -16294330 + L1ME4a LINE L1 5986 6118 -3 2305 96 3 0 chr20 50373679 50373981 -16294024 + AluSx SINE Alu 1 303 -9 1882 153 7 23 chr20 50374311 50374618 -16293387 - AluJo SINE Alu -10 302 1 31 0 0 0 chr20 50374940 50374971 -16293034 + AT_rich Low_complexity Low_complexity 1 31 0 902 107 23 15 chr20 50375198 50375329 -16292676 - AluSq/x SINE Alu -178 134 3 23 0 0 53 chr20 50375477 50375495 -16292510 + AT_rich Low_complexity Low_complexity 1 18 -18 2310 69 3 7 chr20 50375495 50375785 -16292220 + AluY SINE Alu 1 289 -22 23 0 0 53 chr20 50375785 50375804 -16292201 + AT_rich Low_complexity Low_complexity 18 36 0 1959 156 3 0 chr20 50375811 50376106 -16291899 + AluJb SINE Alu 5 300 -12 2099 128 3 7 chr20 50376354 50376652 -16291353 + AluSx SINE Alu 1 297 -15 254 262 28 103 chr20 50376675 50376732 -16291273 + L1MC4a LINE L1 5779 5839 -1969 2534 71 6 0 chr20 50376732 50377043 -16290962 + AluSp SINE Alu 1 313 0 254 262 28 103 chr20 50377043 50377171 -16290834 + L1MC4a LINE L1 5839 5943 -1865 2175 108 0 54 chr20 50377171 50377486 -16290519 + AluSx SINE Alu 1 298 -14 254 262 28 103 chr20 50377486 50377551 -16290454 + L1MC4a LINE L1 5943 6011 -1797 21 36 0 0 chr20 50378060 50378088 -16289917 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr20 50378142 50378170 -16289835 + AT_rich Low_complexity Low_complexity 1 28 0 835 164 84 70 chr20 50378907 50379041 -16288964 + MER20 DNA MER1_type 1 132 -87 2265 76 35 3 chr20 50379041 50379329 -16288676 + AluSp SINE Alu 1 297 -16 327 25 0 0 chr20 50379329 50379369 -16288636 + (CA)n Simple_repeat Simple_repeat 2 41 0 835 164 84 70 chr20 50379369 50379446 -16288559 + MER20 DNA MER1_type 131 216 -3 457 167 12 130 chr20 50380109 50380265 -16287740 + MER96B DNA MER1_type? 32 169 -243 1799 156 0 33 chr20 50380265 50380567 -16287438 + AluJo SINE Alu 1 292 -20 1787 170 0 7 chr20 50380593 50380881 -16287124 + AluJo SINE Alu 1 286 -26 299 209 0 15 chr20 50380910 50380977 -16287028 + MER96B DNA MER1_type? 177 242 -175 2067 130 13 3 chr20 50381310 50381611 -16286394 - AluSx SINE Alu -8 304 1 1161 90 0 48 chr20 50382144 50382279 -16285726 + AluSx SINE Alu 2 129 -183 2333 106 7 0 chr20 50382279 50382581 -16285424 + AluSg SINE Alu 1 304 -6 1161 90 0 48 chr20 50382581 50382612 -16285393 + AluSx SINE Alu 129 160 -152 271 91 0 0 chr20 50382612 50382656 -16285349 + Alu SINE Alu 259 302 0 2283 78 3 10 chr20 50383180 50383473 -16284532 + AluSq SINE Alu 1 291 -22 2272 117 0 0 chr20 50383498 50383798 -16284207 - AluSx SINE Alu -12 300 1 2073 136 26 37 chr20 50383839 50383938 -16284067 + L1MB1 LINE L1 5754 5853 -315 2109 132 0 13 chr20 50383938 50384249 -16283756 - AluJb SINE Alu -5 307 1 2073 136 26 37 chr20 50384249 50384531 -16283474 + L1MB1 LINE L1 5853 6131 -37 1962 132 20 7 chr20 50384543 50384839 -16283166 + AluSx SINE Alu 13 312 0 21 0 0 0 chr20 50385043 50385064 -16282941 + AT_rich Low_complexity Low_complexity 1 21 0 459 196 31 0 chr20 50385136 50385233 -16282772 - L1MB5 LINE L1 0 6174 6075 1875 146 31 0 chr20 50385598 50385886 -16282119 - AluJb SINE Alu -11 301 5 232 313 0 12 chr20 50386826 50386906 -16281099 + A-rich Low_complexity Low_complexity 1 79 0 203 235 0 15 chr20 50388141 50388209 -16279796 + CT-rich Low_complexity Low_complexity 1 67 0 2322 109 0 0 chr20 50388213 50388517 -16279488 - AluSx SINE Alu -8 304 1 2300 92 0 3 chr20 50388541 50388835 -16279170 + AluSg SINE Alu 1 293 -17 399 185 6 51 chr20 50388835 50388981 -16279024 + CT-rich Low_complexity Low_complexity 13 153 0 2291 67 3 7 chr20 50389385 50389669 -16278336 + AluSp SINE Alu 1 283 -30 1577 168 75 14 chr20 50389851 50390209 -16277796 - Zaphod DNA AcHobo -50 3981 3602 234 156 133 0 chr20 50390235 50390280 -16277725 - MER58 DNA MER1_type -15 2405 2355 49 37 0 12 chr20 50390302 50390323 -16277682 + AT_rich Low_complexity Low_complexity 1 21 -59 1928 149 3 20 chr20 50390323 50390618 -16277387 + AluJo SINE Alu 1 290 -22 49 37 0 12 chr20 50390618 50390677 -16277328 + AT_rich Low_complexity Low_complexity 21 80 0 403 227 34 11 chr20 50390680 50390856 -16277149 + (TA)n Simple_repeat Simple_repeat 1 180 0 2135 234 162 36 chr20 50390927 50390961 -16277044 - Zaphod DNA AcHobo -3043 988 960 2489 54 3 0 chr20 50390961 50391255 -16276750 - AluY SINE Alu -16 295 1 2135 234 162 36 chr20 50391255 50391586 -16276419 - Zaphod DNA AcHobo -3071 960 672 2029 119 3 23 chr20 50391586 50391896 -16276109 + AluSx SINE Alu 1 304 -8 2135 234 162 36 chr20 50391896 50392307 -16275698 - Zaphod DNA AcHobo -3359 672 86 1958 146 0 26 chr20 50392307 50392616 -16275389 - AluJb SINE Alu -11 301 1 2135 234 162 36 chr20 50392616 50392715 -16275290 - Zaphod DNA AcHobo -3945 86 1 353 300 104 50 chr20 50392773 50393053 -16274952 - Charlie8 DNA MER1_type -1021 1396 15 2030 137 0 7 chr20 50393129 50393422 -16274583 - AluSx SINE Alu -21 291 1 1902 144 0 45 chr20 50393553 50393865 -16274140 + AluJb SINE Alu 1 298 -14 381 286 89 44 chr20 50394199 50394255 -16273750 + MIR SINE MIR 4 56 -206 2169 129 0 0 chr20 50394255 50394549 -16273456 + AluSx SINE Alu 3 296 -16 381 286 89 44 chr20 50394549 50394740 -16273265 + MIR SINE MIR 56 262 0 323 228 63 13 chr20 50394774 50394853 -16273152 - Zaphod DNA AcHobo -3948 83 1 244 247 0 52 chr20 50395171 50395248 -16272757 - MER5A DNA MER1_type -72 117 45 403 187 18 10 chr20 50395404 50395501 -16272504 - L1M4 LINE L1 -2263 3883 3783 626 238 110 71 chr20 50395643 50395689 -16272316 - Charlie2 DNA MER1_type 0 2862 2819 1015 167 12 6 chr20 50395689 50395857 -16272148 - FAM SINE Alu -6 169 1 2279 111 0 3 chr20 50395862 50396159 -16271846 - AluSg SINE Alu -14 296 1 626 238 110 71 chr20 50396159 50396478 -16271527 - Charlie2 DNA MER1_type -46 2816 2412 2183 93 0 24 chr20 50396478 50396788 -16271217 - AluSg SINE Alu 0 303 1 626 238 110 71 chr20 50396788 50396913 -16271092 - Charlie2 DNA MER1_type -450 2412 2293 248 309 0 0 chr20 50397345 50397413 -16270592 + (TG)n Simple_repeat Simple_repeat 2 69 0 1769 201 0 0 chr20 50397414 50397708 -16270297 - AluJo SINE Alu -18 294 1 365 269 22 30 chr20 50397764 50397898 -16270107 - L1MC/D LINE L1 -2038 5770 5638 502 268 18 104 chr20 50398149 50398276 -16269729 - MIR SINE MIR -3 259 167 1811 152 30 13 chr20 50398276 50398578 -16269427 + AluJo SINE Alu 1 307 -5 502 268 18 104 chr20 50398578 50398730 -16269275 - MIR SINE MIR -95 167 4 195 0 39 0 chr20 50398788 50398814 -16269191 + (TTTA)n Simple_repeat Simple_repeat 3 180 0 2021 90 32 0 chr20 50398814 50399092 -16268913 - AluSx SINE Alu -1 312 1 1452 169 4 4 chr20 50399093 50399341 -16268664 - L1MD3 LINE L1 -18 7977 7730 285 292 154 15 chr20 50399985 50400115 -16267890 - L2 LINE L2 0 3313 3166 225 0 0 0 chr20 50400145 50400170 -16267835 + (TTTA)n Simple_repeat Simple_repeat 1 25 0 2006 135 0 0 chr20 50400195 50400499 -16267506 - AluSx SINE Alu -8 304 1 334 269 51 0 chr20 50400504 50400582 -16267423 - L2 LINE L2 -3 3310 3229 813 194 30 0 chr20 50400642 50400807 -16267198 - AluSg/x SINE Alu -2 308 139 259 351 26 0 chr20 50400814 50400891 -16267114 - L2 LINE L2 -240 3073 2995 731 178 8 16 chr20 50400891 50401020 -16266985 + AluJo SINE Alu 9 136 -176 269 268 35 56 chr20 50401069 50401211 -16266794 - L2 LINE L2 -339 2974 2836 798 204 182 0 chr20 50401449 50401625 -16266380 + MER58A DNA MER1_type 8 215 -9 927 107 0 0 chr20 50401626 50401747 -16266258 + FLAM_C SINE Alu 1 121 -22 378 360 65 5 chr20 50401816 50402016 -16265989 - L2 LINE L2 -570 2744 2533 4090 198 117 29 chr20 50402024 50402685 -16265320 + L1MC4a LINE L1 6656 7446 -362 2387 61 3 6 chr20 50402685 50402996 -16265009 + AluY SINE Alu 2 311 0 4090 198 117 29 chr20 50402996 50403394 -16264611 + L1MC4a LINE L1 7446 7808 0 694 175 0 70 chr20 50403557 50403700 -16264305 + FLAM_C SINE Alu 1 133 0 379 319 86 4 chr20 50404015 50404246 -16263759 - MIR SINE MIR 0 262 55 261 297 55 41 chr20 50404445 50404763 -16263242 - L1ME LINE L1 -660 5506 5181 352 93 0 19 chr20 50404763 50404817 -16263188 - Alu SINE Alu -4 296 244 1061 158 10 67 chr20 50404845 50404886 -16263119 + AluJb SINE Alu 106 148 -164 2488 47 0 0 chr20 50404886 50405183 -16262822 + AluY SINE Alu 1 297 -14 1061 158 10 67 chr20 50405183 50405350 -16262655 + AluJb SINE Alu 148 302 -10 1994 142 0 3 chr20 50405351 50405654 -16262351 + AluSx SINE Alu 1 302 -10 229 271 17 17 chr20 50405692 50405751 -16262254 + L2 LINE L2 3205 3263 -9 2260 76 3 0 chr20 50406145 50406434 -16261571 + AluSp SINE Alu 1 290 -23 779 261 20 0 chr20 50407343 50407546 -16260459 + L1ME4a LINE L1 5522 5728 -393 813 183 30 0 chr20 50407556 50407720 -16260285 + FAM SINE Alu 1 42 -7 405 272 140 52 chr20 50407755 50408027 -16259978 + L1ME4a LINE L1 5822 6117 -4 1733 154 0 39 chr20 50408129 50408434 -16259571 + AluSx SINE Alu 1 293 -19 1207 56 0 0 chr20 50408787 50408930 -16259075 + AluSg1 SINE Alu 1 143 -166 2316 67 3 0 chr20 50408932 50409231 -16258774 + AluSp SINE Alu 1 300 -13 410 185 49 0 chr20 50409250 50409331 -16258674 + L1MD1 LINE L1 6134 6218 -24 396 219 27 0 chr20 50409345 50409418 -16258587 - MER58A DNA MER1_type -32 75 1 238 299 112 19 chr20 50409462 50409569 -16258436 + MLT1H LTR MaLR 59 175 -374 276 217 54 124 chr20 50409725 50409854 -16258151 + MLT1H LTR MaLR 430 549 0 2284 92 0 0 chr20 50410060 50410364 -16257641 + AluSq SINE Alu 1 304 -9 237 171 0 0 chr20 50410511 50410546 -16257459 - Tigger2a DNA MER2_type -4 440 406 1258 139 151 41 chr20 50410549 50410794 -16257211 - Tigger2a DNA MER2_type -149 285 14 1660 162 17 3 chr20 50410796 50411086 -16256919 - AluJo SINE Alu -13 299 6 1854 159 0 0 chr20 50411564 50411853 -16256152 + AluSx SINE Alu 1 289 -23 2038 116 14 0 chr20 50412044 50412336 -16255669 + AluSx SINE Alu 1 296 -16 3635 84 43 63 chr20 50412596 50413030 -16254975 + L1MA4A LINE L1 5692 6133 -170 2445 71 0 0 chr20 50413030 50413339 -16254666 - AluSg SINE Alu -1 309 1 3635 84 43 63 chr20 50413339 50413412 -16254593 + L1MA4A LINE L1 6133 6206 -97 2112 87 21 0 chr20 50413412 50413699 -16254306 + AluSq SINE Alu 1 293 -20 3635 84 43 63 chr20 50413699 50413810 -16254195 + L1MA4A LINE L1 6206 6299 -4 606 136 29 0 chr20 50413926 50414029 -16253976 - L1MD2 LINE L1 -5 6354 6249 338 192 0 39 chr20 50414071 50414149 -16253856 - AluJ/FRAM SINE Alu -1 301 227 1599 157 15 4 chr20 50414362 50414630 -16253375 - AluJo SINE Alu -41 271 1 896 154 0 0 chr20 50415052 50415182 -16252823 - FLAM_C SINE Alu -1 132 3 216 0 0 0 chr20 50415190 50415214 -16252791 + (T)n Simple_repeat Simple_repeat 1 24 0 2333 67 0 0 chr20 50415285 50415584 -16252421 - AluY SINE Alu -12 299 1 2015 138 0 0 chr20 50415638 50415936 -16252069 - AluSx SINE Alu -14 298 1 719 200 0 0 chr20 50416029 50416154 -16251851 - FLAM_C SINE Alu -17 126 2 1103 207 177 8 chr20 50416155 50416522 -16251483 + Charlie4a DNA MER1_type 63 491 -17 717 138 23 0 chr20 50416681 50416811 -16251194 + FLAM_C SINE Alu 1 133 0 2013 120 37 0 chr20 50417227 50417526 -16250479 + AluSx SINE Alu 1 310 -2 206 282 176 12 chr20 50417572 50417657 -16250348 + MIR SINE MIR 51 149 -113 443 221 146 44 chr20 50417847 50418005 -16250000 - MER45A DNA AcHobo -1 177 4 274 256 12 24 chr20 50418020 50418102 -16249903 - MER5B DNA MER1_type -3 175 95 453 229 92 0 chr20 50418894 50419109 -16248896 + L1MA9 LINE L1 5961 6291 -21 2080 103 7 3 chr20 50419127 50419419 -16248586 + AluSq SINE Alu 1 293 -20 593 240 35 12 chr20 50419522 50419693 -16248312 - MER96B DNA MER1_type? -2 415 241 342 204 182 0 chr20 50419795 50419883 -16248122 - MER96B DNA MER1_type? -313 104 1 479 272 18 9 chr20 50420220 50420334 -16247671 - FLAM_A SINE Alu -19 123 9 640 189 88 110 chr20 50420408 50420636 -16247369 + MER58A DNA MER1_type 2 224 0 694 210 58 0 chr20 50421176 50421314 -16246691 + MER58A DNA MER1_type 22 167 0 247 226 65 32 chr20 50422548 50422641 -16245364 - L1ME3A LINE L1 -88 6082 5987 720 179 148 6 chr20 50423884 50424046 -16243959 - MIR SINE MIR -64 198 14 23 0 0 0 chr20 50424249 50424272 -16243733 + AT_rich Low_complexity Low_complexity 1 23 0 2459 50 0 3 chr20 50424949 50425248 -16242757 - AluY SINE Alu -13 298 1 722 232 84 0 chr20 50425398 50425588 -16242417 - HAL1 LINE L1 -775 1732 1527 1288 150 18 73 chr20 50427852 50427929 -16240076 + L1MC1 LINE L1 6051 6131 -202 1854 143 10 10 chr20 50427929 50428230 -16239775 + AluJb SINE Alu 1 301 -11 1288 150 18 73 chr20 50428230 50428438 -16239567 + L1MC1 LINE L1 6131 6320 -13 2034 106 0 0 chr20 50428989 50429262 -16238743 + AluSg SINE Alu 1 273 -37 1268 201 83 52 chr20 50429290 50429578 -16238427 + AluJo SINE Alu 1 297 -5 703 169 0 0 chr20 50429687 50429805 -16238200 + FLAM_C SINE Alu 2 119 -24 24 67 0 0 chr20 50429805 50429850 -16238155 + AT_rich Low_complexity Low_complexity 1 45 0 2300 88 0 7 chr20 50430176 50430482 -16237523 + AluSp SINE Alu 1 304 -9 938 197 106 5 chr20 50430678 50430876 -16237129 - MER20 DNA MER1_type 0 219 2 1674 145 16 30 chr20 50431038 50431342 -16236663 + AluSx SINE Alu 1 300 -12 261 271 168 32 chr20 50431440 50431595 -16236410 + MLT1I LTR MaLR 60 235 -174 2081 105 3 7 chr20 50431614 50431910 -16236095 - AluSx SINE Alu -17 295 1 954 255 59 0 chr20 50431912 50432202 -16235803 + Charlie4a DNA MER1_type 1 307 -201 361 227 21 41 chr20 50432264 50432361 -16235644 - MER5A DNA MER1_type -77 112 18 1287 156 107 27 chr20 50432959 50433247 -16234758 + AluJo SINE Alu 11 312 0 501 247 47 20 chr20 50433619 50433769 -16234236 + MLT1J LTR MaLR 33 186 -325 250 220 198 11 chr20 50434259 50434350 -16233655 - MER20 DNA MER1_type -45 174 67 424 169 88 128 chr20 50435030 50435081 -16232924 - MER58B DNA MER1_type -2080 340 288 2047 137 0 0 chr20 50435081 50435381 -16232624 + AluSx SINE Alu 5 304 -8 424 169 88 128 chr20 50435381 50435477 -16232528 - MER58B DNA MER1_type -2132 288 199 301 213 38 62 chr20 50435714 50435794 -16232211 + L2 LINE L2 3145 3222 -50 2210 88 0 16 chr20 50435924 50436230 -16231775 - AluSx SINE Alu -11 301 1 1226 179 40 26 chr20 50436262 50436535 -16231470 + AluJo SINE Alu 5 281 -31 885 81 16 0 chr20 50436536 50436660 -16231345 + AluSp/q SINE Alu 176 301 -12 2179 96 0 13 chr20 50437192 50437493 -16230512 + AluSg SINE Alu 1 297 -13 381 264 191 32 chr20 50437618 50437838 -16230167 - MER5C DNA MER1_type -1 323 69 423 248 160 42 chr20 50437878 50438285 -16229720 + L1MC5 LINE L1 7431 7885 -76 298 174 130 0 chr20 50438290 50438359 -16229646 - MER116 DNA Mariner -2 78 1 1930 86 16 0 chr20 50438468 50438724 -16229281 - AluY SINE Alu -16 295 36 2114 119 0 0 chr20 50438724 50439016 -16228989 - AluSx SINE Alu -19 293 1 459 258 194 11 chr20 50439159 50439345 -16228660 + MIR SINE MIR 4 223 -39 899 223 23 27 chr20 50439448 50439668 -16228337 + MER20 DNA MER1_type 1 219 0 264 325 70 18 chr20 50439683 50439797 -16228208 + MER5A DNA MER1_type 1 120 -69 1449 140 6 119 chr20 50439851 50440179 -16227826 - AluJb SINE Alu -21 291 1 546 211 121 42 chr20 50440245 50440307 -16227698 + MER5A DNA MER1_type 9 65 -124 1585 104 93 62 chr20 50440307 50440596 -16227409 + AluSc SINE Alu 1 298 -11 546 211 121 42 chr20 50440596 50440699 -16227306 + MER5A DNA MER1_type 65 187 -2 940 201 17 6 chr20 50440709 50440888 -16227117 - MER5A DNA MER1_type 0 189 9 569 298 128 13 chr20 50441126 50441361 -16226644 + MIR SINE MIR 1 262 0 187 152 0 0 chr20 50442666 50442699 -16225306 + MER5A DNA MER1_type 59 91 -98 426 249 32 37 chr20 50442993 50443210 -16224795 + L2 LINE L2 2854 3069 -244 656 147 203 28 chr20 50443906 50444049 -16223956 + MER5A DNA MER1_type 16 183 -6 238 278 0 0 chr20 50444055 50444109 -16223896 + MER5A DNA MER1_type 130 183 -6 503 223 185 0 chr20 50444118 50444248 -16223757 - MER5A DNA MER1_type -6 183 30 338 100 8 269 chr20 50444269 50444399 -16223606 - MER5B DNA MER1_type -80 98 3 304 231 159 36 chr20 50444833 50444963 -16223042 - MER5A DNA MER1_type -8 181 28 2069 80 39 3 chr20 50445285 50445571 -16222434 + AluSx SINE Alu 1 296 -16 462 257 230 21 chr20 50446061 50446405 -16221600 - L1MD2 LINE L1 -263 5907 5526 1514 178 21 7 chr20 50446423 50446710 -16221295 + AluJb SINE Alu 10 300 -12 1375 240 40 69 chr20 50446900 50446978 -16221027 - Charlie7 DNA MER1_type -297 2315 2236 2060 116 7 7 chr20 50446978 50447279 -16220726 - AluSq SINE Alu -12 301 1 1375 240 40 69 chr20 50447279 50447332 -16220673 - Charlie7 DNA MER1_type -376 2236 2183 387 0 0 0 chr20 50447332 50447375 -16220630 + (CA)n Simple_repeat Simple_repeat 2 44 0 1375 240 40 69 chr20 50447375 50447610 -16220395 - Charlie7 DNA MER1_type -429 2183 1943 2252 62 3 59 chr20 50447610 50447932 -16220073 - AluY SINE Alu -7 304 1 1375 240 40 69 chr20 50447932 50447968 -16220037 - Charlie7 DNA MER1_type -669 1943 1907 2158 115 3 6 chr20 50447968 50448281 -16219724 + AluSx SINE Alu 1 312 0 1375 240 40 69 chr20 50448281 50448467 -16219538 - Charlie7 DNA MER1_type -705 1907 1741 2427 70 6 32 chr20 50449668 50449983 -16218022 - AluSp SINE Alu -4 309 3 659 220 44 6 chr20 50450019 50450201 -16217804 - Charlie7 DNA MER1_type -934 1678 1490 390 273 119 87 chr20 50450209 50450270 -16217735 + MIR SINE MIR 2 60 -202 2322 106 3 3 chr20 50450270 50450582 -16217423 + AluSx SINE Alu 1 312 0 390 273 119 87 chr20 50450582 50450773 -16217232 + MIR SINE MIR 60 262 0 254 342 42 0 chr20 50450822 50450942 -16217063 - Charlie7 DNA MER1_type -2262 350 226 2122 126 0 7 chr20 50451085 50451387 -16216618 - AluJb SINE Alu -12 300 1 2296 78 0 0 chr20 50451523 50451834 -16216171 + AluY SINE Alu 1 311 0 1992 120 0 36 chr20 50451890 50452199 -16215806 - AluSx SINE Alu -4 308 11 190 275 77 11 chr20 50452199 50452290 -16215715 - L2 LINE L2 0 3313 3217 248 359 49 14 chr20 50452422 50452564 -16215441 - L2 LINE L2 -279 3034 2888 217 271 17 0 chr20 50452756 50452815 -16215190 - MER5A DNA MER1_type -2 187 128 239 210 16 16 chr20 50452822 50452884 -16215121 - MER5A DNA MER1_type 0 189 128 268 239 30 0 chr20 50452891 50452958 -16215047 - MER5A DNA MER1_type 0 189 121 717 296 79 46 chr20 50452961 50453386 -16214619 + L1MC4a LINE L1 5374 5820 -1988 2279 76 23 26 chr20 50453386 50453690 -16214315 + AluY SINE Alu 1 303 -8 717 296 79 46 chr20 50453690 50453781 -16214224 + L1MC4a LINE L1 5820 5907 -1901 2045 152 0 0 chr20 50453883 50454185 -16213820 - AluJb SINE Alu -10 302 1 189 0 0 0 chr20 50454254 50454275 -16213730 + (TC)n Simple_repeat Simple_repeat 2 22 0 2191 115 3 0 chr20 50454303 50454599 -16213406 - AluSp SINE Alu -11 302 6 2437 81 0 0 chr20 50454608 50454906 -16213099 - AluSx SINE Alu -14 298 1 282 244 77 32 chr20 50454984 50455174 -16212831 + L1MC4a LINE L1 5768 5964 -157 2132 99 0 14 chr20 50455258 50455540 -16212465 + AluSc SINE Alu 1 278 -31 231 36 0 0 chr20 50455540 50455568 -16212437 + (CA)n Simple_repeat Simple_repeat 1 28 0 182 179 51 0 chr20 50455641 50455680 -16212325 + MER5A DNA MER1_type 121 161 -28 2195 132 0 0 chr20 50455807 50456117 -16211888 + AluSx SINE Alu 1 310 -2 1603 187 0 37 chr20 50456267 50456566 -16211439 - AluJb SINE Alu -22 290 3 197 309 29 0 chr20 50457077 50457145 -16210860 - L2 LINE L2 0 3272 3203 1659 190 3 16 chr20 50457331 50457647 -16210358 + AluJo SINE Alu 1 312 0 2090 108 10 26 chr20 50457705 50458004 -16210001 + AluSx SINE Alu 1 303 -9 294 29 0 0 chr20 50458004 50458039 -16209966 + (TA)n Simple_repeat Simple_repeat 2 36 0 263 71 24 0 chr20 50458038 50458080 -16209925 + (CA)n Simple_repeat Simple_repeat 2 44 0 * 2090 108 10 26 chr20 50458039 50458086 -16209919 + AluSx SINE Alu 302 301 -11 699 109 10 0 chr20 50458086 50458187 -16209818 + AluSc SINE Alu 132 233 -76 191 61 30 0 chr20 50458201 50458234 -16209771 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 1957 166 21 6 chr20 50458418 50458750 -16209255 + MLT1A1 LTR MaLR 11 347 -18 15119 119 15 23 chr20 50458934 50459138 -16208867 + Tigger1 DNA MER2_type 27 231 -2187 2413 100 0 0 chr20 50459138 50459447 -16208558 - AluSx SINE Alu -3 309 1 15119 119 15 23 chr20 50459447 50460710 -16207295 + Tigger1 DNA MER2_type 231 1502 -916 2477 45 7 0 chr20 50460710 50460997 -16207008 + AluY SINE Alu 16 304 -7 15119 119 15 23 chr20 50460997 50461466 -16206539 + Tigger1 DNA MER2_type 1502 1946 -472 1904 103 16 77 chr20 50461466 50461776 -16206229 - AluSx SINE Alu -20 292 2 15119 119 15 23 chr20 50461776 50462144 -16205861 + Tigger1 DNA MER2_type 1946 2315 -103 1909 99 0 4 chr20 50462358 50462611 -16205394 - AluY SINE Alu -30 281 30 240 269 142 71 chr20 50462731 50462928 -16205077 + HAL1 LINE L1 2292 2502 -5 1885 132 43 23 chr20 50463071 50463374 -16204631 - AluJb SINE Alu -3 309 1 636 269 27 51 chr20 50464302 50464352 -16203653 - MIR SINE MIR -11 251 201 1983 114 9 60 chr20 50464352 50464668 -16203337 - AluSx SINE Alu -12 300 1 636 269 27 51 chr20 50464668 50464874 -16203131 - MIR SINE MIR -61 201 1 21 0 0 0 chr20 50465379 50465400 -16202605 + AT_rich Low_complexity Low_complexity 1 21 0 2362 86 7 0 chr20 50465429 50465720 -16202285 - AluSc SINE Alu -16 293 1 2151 131 46 25 chr20 50465798 50466165 -16201840 + THE1C LTR MaLR 1 375 0 841 120 17 0 chr20 50466635 50466752 -16201253 + FLAM_C SINE Alu 9 127 -16 247 200 0 0 chr20 50466771 50466816 -16201189 - MLT1I LTR MaLR -265 144 100 270 218 0 36 chr20 50467239 50467294 -16200711 - MER94 DNA DNA -81 53 1 2129 112 0 29 chr20 50467376 50467551 -16200454 - AluSx SINE Alu -7 305 141 1686 54 0 92 chr20 50467551 50467791 -16200214 - AluY SINE Alu -11 300 83 2129 112 0 29 chr20 50467791 50467929 -16200076 - AluSx SINE Alu -171 141 1 220 226 0 60 chr20 50468252 50468336 -16199669 + L2 LINE L2 3136 3214 -58 683 263 106 72 chr20 50468456 50468682 -16199323 + L2 LINE L2 2916 3162 -151 1853 171 7 0 chr20 50468682 50468980 -16199025 - AluJo SINE Alu -8 304 5 683 263 106 72 chr20 50468980 50469129 -16198876 + L2 LINE L2 3162 3304 -9 2193 107 30 0 chr20 50469264 50469563 -16198442 + AluY SINE Alu 1 308 -3 549 157 13 33 chr20 50469584 50469737 -16198268 + GA-rich Low_complexity Low_complexity 3 152 0 11965 168 17 8 chr20 50469753 50472123 -16195882 + L1M1 LINE L1 3460 5855 -1710 2134 130 17 0 chr20 50472224 50472523 -16195482 + AluJb SINE Alu 3 306 -6 347 183 285 15 chr20 50472582 50472719 -16195286 + MER69A DNA AcHobo 4 177 0 1258 210 20 81 chr20 50473264 50473324 -16194681 + MER58B DNA MER1_type 32 94 -2326 1969 161 0 3 chr20 50473324 50473634 -16194371 - AluSx SINE Alu -3 309 1 1258 210 20 81 chr20 50473634 50473896 -16194109 + MER58B DNA MER1_type 94 341 0 1960 138 0 30 chr20 50473955 50474259 -16193746 - AluJb SINE Alu -17 295 1 2351 110 7 0 chr20 50474287 50474597 -16193408 + AluSx SINE Alu 1 312 0 207 0 0 0 chr20 50474609 50474632 -16193373 + (CAA)n Simple_repeat Simple_repeat 2 24 0 380 200 14 0 chr20 50474642 50474712 -16193293 + Charlie2 DNA MER1_type 80 150 -2712 1209 222 128 58 chr20 50474795 50475248 -16192757 + Charlie2 DNA MER1_type 1856 2363 -499 2245 104 7 0 chr20 50475248 50475535 -16192470 - AluSx SINE Alu -23 289 1 1209 222 128 58 chr20 50475535 50475684 -16192321 + Charlie2 DNA MER1_type 2363 2500 -362 1515 187 48 0 chr20 50476364 50476485 -16191520 + AluJb SINE Alu 1 115 -197 378 0 0 0 chr20 50476485 50476527 -16191478 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 1515 187 48 0 chr20 50476527 50476694 -16191311 + AluJb SINE Alu 115 303 -9 5046 116 49 0 chr20 50477367 50478141 -16189864 + L1PA16 LINE L1 5354 6165 -1 15944 118 11 31 chr20 50478262 50480341 -16187664 + Tigger1 DNA MER2_type 1 2120 -298 1883 132 25 65 chr20 50480341 50480555 -16187450 + L1PB4 LINE L1 5816 6037 -119 2087 114 0 4 chr20 50480555 50480835 -16187170 + AluSx SINE Alu 1 279 -33 453 19 0 0 chr20 50480835 50480889 -16187116 + (CA)n Simple_repeat Simple_repeat 1 54 0 1883 132 25 65 chr20 50480889 50481028 -16186977 + L1PB4 LINE L1 6035 6156 0 2421 104 0 0 chr20 50481030 50481337 -16186668 + AluSg SINE Alu 1 307 -3 15944 118 11 31 chr20 50481337 50481721 -16186284 + Tigger1 DNA MER2_type 2121 2418 0 1022 197 71 92 chr20 50481941 50482010 -16185995 + LTR37A LTR ERV1 55 124 -302 1729 161 0 52 chr20 50482010 50482320 -16185685 - AluJb SINE Alu -18 294 1 1022 197 71 92 chr20 50482320 50482630 -16185375 + LTR37A LTR ERV1 124 426 0 397 304 74 66 chr20 50482646 50482768 -16185237 + L1M4 LINE L1 2998 3117 -3029 2495 79 0 7 chr20 50482768 50483073 -16184932 + AluSc SINE Alu 1 303 -6 397 304 74 66 chr20 50483073 50483434 -16184571 + L1M4 LINE L1 3117 3485 -2661 3564 113 34 43 chr20 50483708 50483843 -16184162 - Tigger3(Golem) DNA MER2_type -130 2898 2763 1771 139 56 4 chr20 50483843 50484134 -16183871 + AluJb SINE Alu 3 307 0 3564 113 34 43 chr20 50484134 50484623 -16183382 - Tigger3(Golem) DNA MER2_type -265 2763 2279 490 184 18 97 chr20 50484616 50484646 -16183359 - Tigger3(Golem) DNA MER2_type -494 108 77 * 4907 32 2 0 chr20 50484646 50485212 -16182793 + L1PA3 LINE L1 5588 6154 -1 490 184 18 97 chr20 50485212 50485295 -16182710 - Tigger3(Golem) DNA MER2_type -525 77 4 415 282 46 46 chr20 50485300 50485516 -16182489 + L1M4 LINE L1 3723 3938 -2208 737 128 0 0 chr20 50485677 50485779 -16182226 - AluSg/x SINE Alu -17 293 192 267 312 96 0 chr20 50485878 50486003 -16182002 + L1M4 LINE L1 4067 4203 -1943 1713 119 0 25 chr20 50486203 50486447 -16181558 + AluSq SINE Alu 1 238 -75 1900 137 7 0 chr20 50486911 50487196 -16180809 + AluSx SINE Alu 23 309 -3 240 134 75 0 chr20 50488194 50488261 -16179744 + (TATG)n Simple_repeat Simple_repeat 1 72 0 356 212 78 101 chr20 50488364 50488397 -16179608 + L1ME4a LINE L1 5946 5978 -143 2383 82 10 0 chr20 50488397 50488689 -16179316 + AluY SINE Alu 1 295 -16 356 212 78 101 chr20 50488689 50488834 -16179171 + L1ME4a LINE L1 5978 6120 -1 2071 113 52 0 chr20 50490240 50490531 -16177474 + AluSx SINE Alu 1 306 -6 397 333 28 60 chr20 50492683 50492935 -16175070 - MIR SINE MIR 0 262 19 1085 211 36 0 chr20 50493197 50493391 -16174614 + MER58A DNA MER1_type 10 210 -14 1613 212 72 38 chr20 50493415 50493886 -16174119 - Charlie4a DNA MER1_type -5 503 17 283 313 96 9 chr20 50494173 50494288 -16173717 + L2 LINE L2 3146 3270 -2 376 268 153 53 chr20 50494825 50495053 -16172952 + MLT1H LTR MaLR 196 446 -103 233 281 21 31 chr20 50495138 50495234 -16172771 + MLT1H-int LTR MaLR 1 95 -1276 4011 44 2 0 chr20 50496141 50496617 -16171388 - L1PA7 LINE L1 0 6154 5678 474 242 108 103 chr20 50496864 50496894 -16171111 + MLT1H LTR MaLR 1 29 -520 2226 114 3 3 chr20 50496894 50497200 -16170805 + AluSx SINE Alu 1 306 -6 474 242 108 103 chr20 50497200 50497715 -16170290 + MLT1H LTR MaLR 29 549 0 1002 120 0 0 chr20 50498039 50498172 -16169833 + AluSq/x SINE Alu 1 133 -180 1655 162 72 3 chr20 50498175 50498465 -16169540 + AluSx SINE Alu 1 310 -2 27 0 0 0 chr20 50499077 50499104 -16168901 + AT_rich Low_complexity Low_complexity 1 27 0 506 290 71 22 chr20 50499219 50499402 -16168603 + MLT1J LTR MaLR 58 249 -262 382 267 40 62 chr20 50499537 50499713 -16168292 + MLT1J LTR MaLR 339 510 -1 204 40 0 0 chr20 50499917 50499942 -16168063 + (T)n Simple_repeat Simple_repeat 1 25 0 274 255 102 0 chr20 50500006 50500104 -16167901 - L1ME LINE L1 -269 5852 5745 2124 114 0 0 chr20 50500486 50500785 -16167220 + AluSx SINE Alu 1 299 -13 2296 90 0 3 chr20 50500815 50501127 -16166878 + AluY SINE Alu 1 311 0 2291 102 0 0 chr20 50501549 50501862 -16166143 + AluSp SINE Alu 1 313 0 24 32 0 0 chr20 50502312 50502343 -16165662 + AT_rich Low_complexity Low_complexity 1 31 0 1492 132 143 8 chr20 50502499 50502764 -16165241 + AluJb SINE Alu 1 301 -1 241 215 203 49 chr20 50502885 50503072 -16164933 - L1ME LINE L1 -560 5602 5397 3390 166 28 54 chr20 50503247 50504008 -16163997 + L1MC4 LINE L1 7300 8040 -2 396 263 79 9 chr20 50504598 50504712 -16163293 + MLT1L LTR MaLR 168 289 -326 341 215 0 35 chr20 50504794 50504892 -16163113 + MLT1L LTR MaLR 239 392 -184 1673 155 0 4 chr20 50504922 50505187 -16162818 - AluJb SINE Alu -9 303 40 2199 114 0 0 chr20 50505513 50505821 -16162184 + AluSq SINE Alu 1 308 -5 544 171 0 24 chr20 50505940 50506063 -16161942 + CT-rich Low_complexity Low_complexity 3 122 0 249 200 0 0 chr20 50506216 50506266 -16161739 + MER113 DNA MER1_type? 4 53 -468 452 231 81 25 chr20 50506384 50506544 -16161461 - HsTC2 DNA Tc2 0 1898 1730 2278 277 69 5 chr20 50506554 50506873 -16161132 - HsTC2 DNA Tc2 -1061 837 540 1116 163 11 5 chr20 50506873 50507057 -16160948 + MER5A DNA MER1_type 4 188 -1 2278 277 69 5 chr20 50507057 50507492 -16160513 - HsTC2 DNA Tc2 -1358 540 35 460 309 115 5 chr20 50507496 50507687 -16160318 + MIR SINE MIR 40 251 -11 291 221 156 0 chr20 50507766 50507843 -16160162 + MER81 DNA DNA 1 89 -25 682 147 40 85 chr20 50508119 50508242 -16159763 - L1 LINE L1 -878 5268 5154 2139 105 3 0 chr20 50508242 50508536 -16159469 + AluSp SINE Alu 1 295 -18 682 147 40 85 chr20 50508536 50508589 -16159416 - L1 LINE L1 -992 5154 5100 2241 103 0 0 chr20 50508640 50508940 -16159065 + AluSx SINE Alu 1 300 -12 369 282 43 0 chr20 50509060 50509177 -16158828 + MIR SINE MIR 87 208 -54 987 235 53 39 chr20 50509204 50509489 -16158516 - L2 LINE L2 -4 3309 3021 483 194 0 0 chr20 50509817 50509920 -16158085 + (TG)n Simple_repeat Simple_repeat 1 103 0 1899 106 0 0 chr20 50509959 50510223 -16157782 - AluSx SINE Alu -11 301 38 2099 109 3 0 chr20 50510223 50510517 -16157488 - AluSx SINE Alu -17 295 1 369 58 0 0 chr20 50510657 50510709 -16157296 + (TG)n Simple_repeat Simple_repeat 2 53 0 374 232 86 20 chr20 50510711 50510829 -16157176 + MIR SINE MIR 37 166 -42 683 305 120 20 chr20 50511121 50511462 -16156543 - L1MEd LINE L1 -5736 383 9 205 294 12 117 chr20 50511535 50511698 -16156307 - L3 LINE CR1 -267 1310 1165 1741 166 7 3 chr20 50511775 50512076 -16155929 + AluJo SINE Alu 1 302 -10 1956 134 3 7 chr20 50512116 50512421 -16155584 - AluSx SINE Alu -8 304 1 354 292 40 50 chr20 50512426 50512628 -16155377 + L2 LINE L2 3112 3311 -2 2248 93 10 0 chr20 50512674 50512975 -16155030 + AluSx SINE Alu 1 304 -8 313 277 71 0 chr20 50513057 50513169 -16154836 - L1ME4a LINE L1 -262 5859 5740 288 248 44 68 chr20 50513377 50513584 -16154421 - L1P5 LINE L1 -689 5462 5255 1779 142 0 0 chr20 50513586 50513892 -16154113 - AluSx SINE Alu 0 307 2 1880 98 14 0 chr20 50514033 50514308 -16153697 + AluSx SINE Alu 1 279 -33 411 209 27 45 chr20 50514591 50514701 -16153304 + FLAM_A SINE Alu 1 108 -34 208 151 94 0 chr20 50514857 50514910 -16153095 - MER5A DNA MER1_type -83 106 49 2721 7 0 0 chr20 50514976 50515279 -16152726 - AluYb8 SINE Alu -15 303 1 194 268 36 18 chr20 50515536 50515592 -16152413 - L2 LINE L2 -1 3312 3256 195 321 46 83 chr20 50515647 50515756 -16152249 + MER5A DNA MER1_type 83 187 -2 250 251 215 36 chr20 50515976 50516199 -16151806 + MLT1L LTR MaLR 310 572 -43 2222 100 0 3 chr20 50516221 50516532 -16151473 + AluSg SINE Alu 1 310 0 266 331 33 25 chr20 50516588 50516709 -16151296 + MER5A DNA MER1_type 68 189 0 910 236 83 21 chr20 50516728 50516969 -16151036 + MIR SINE MIR 7 262 0 258 283 0 0 chr20 50517015 50517075 -16150930 + L2 LINE L2 2722 2781 -533 2307 142 28 17 chr20 50517459 50517819 -16150186 + THE1B LTR MaLR 1 364 0 353 299 75 30 chr20 50517919 50518053 -16149952 - L2 LINE L2 -6 3307 3168 2218 181 114 35 chr20 50518135 50518703 -16149302 - MER90 LTR ERV1 0 614 2 297 243 57 0 chr20 50518941 50519011 -16148994 - L2 LINE L2 -213 3059 2986 198 0 0 0 chr20 50519018 50519040 -16148965 + (A)n Simple_repeat Simple_repeat 1 22 0 216 182 114 0 chr20 50519061 50519105 -16148900 - L2 LINE L2 -8 3264 3216 692 324 19 0 chr20 50519164 50519374 -16148631 - MIR SINE MIR -37 225 12 2096 96 0 52 chr20 50519388 50519712 -16148293 - AluSg SINE Alu -3 307 1 486 286 60 18 chr20 50520137 50520305 -16147700 - MER5B DNA MER1_type -1 177 3 501 270 60 40 chr20 50520551 50520751 -16147254 - MIR SINE MIR -50 212 9 1900 167 0 0 chr20 50520908 50521219 -16146786 + AluJo SINE Alu 2 312 0 288 323 190 6 chr20 50521443 50521601 -16146404 - L2 LINE L2 -212 3060 2874 300 319 84 18 chr20 50521611 50521777 -16146228 - L2 LINE L2 -180 3092 2916 1592 151 41 14 chr20 50522325 50522616 -16145389 - AluSx SINE Alu -13 299 1 303 234 13 52 chr20 50522790 50522867 -16145138 + Charlie8 DNA MER1_type 192 265 -2152 421 305 99 74 chr20 50522876 50523099 -16144906 - L1ME2 LINE L1 -167 5997 5781 1821 151 3 3 chr20 50523099 50523398 -16144607 - AluJo SINE Alu -13 299 1 421 305 99 74 chr20 50523398 50523492 -16144513 - L1ME2 LINE L1 -383 5781 5691 2090 123 0 0 chr20 50523492 50523794 -16144211 - AluSx SINE Alu -10 302 1 421 305 99 74 chr20 50523794 50523878 -16144127 - L1ME2 LINE L1 -473 5691 5585 2237 97 0 0 chr20 50524050 50524349 -16143656 - AluSq SINE Alu -12 301 3 263 261 126 32 chr20 50525128 50525266 -16142739 - MER5A DNA MER1_type -1 177 15 2282 89 0 0 chr20 50525810 50526103 -16141902 + AluSq SINE Alu 1 293 -20 299 244 97 43 chr20 50526475 50526621 -16141384 + MLT1L LTR MaLR 242 318 -193 269 234 13 26 chr20 50526675 50526752 -16141253 + MLT1K LTR MaLR 507 582 -6 2336 74 3 13 chr20 50526775 50527087 -16140918 - AluY SINE Alu -2 309 1 181 258 0 65 chr20 50527144 50527206 -16140799 + L2 LINE L2 3251 3308 -5 1718 96 0 20 chr20 50527212 50527461 -16140544 + AluSg SINE Alu 52 295 -15 636 295 104 53 chr20 50527463 50527600 -16140405 - L1ME4a LINE L1 -21 6100 5971 1933 101 22 4 chr20 50527600 50527878 -16140127 + AluSc SINE Alu 11 293 -16 636 295 104 53 chr20 50527878 50527943 -16140062 - L1ME4a LINE L1 -150 5971 5911 2257 83 7 0 chr20 50527943 50528244 -16139761 - AluSp SINE Alu -10 303 1 636 295 104 53 chr20 50528244 50528471 -16139534 - L1ME4a LINE L1 -210 5911 5648 336 256 108 57 chr20 50529287 50529463 -16138542 - MER5A DNA MER1_type -4 185 1 790 199 36 0 chr20 50530783 50530949 -16137056 - MER5A DNA MER1_type -12 177 6 305 239 113 143 chr20 50530950 50531207 -16136798 + L2 LINE L2 2823 3086 -227 651 88 0 0 chr20 50531207 50531298 -16136707 + (TTTTC)n Simple_repeat Simple_repeat 5 95 0 305 239 113 143 chr20 50531298 50531315 -16136690 + L2 LINE L2 3086 3102 -211 1201 153 172 19 chr20 50531315 50531577 -16136428 - AluJo SINE Alu 0 302 1 305 239 113 143 chr20 50531577 50531804 -16136201 + L2 LINE L2 3102 3310 -3 230 232 0 137 chr20 50531846 50531941 -16136064 - L2 LINE L2 -11 3302 3221 370 181 53 53 chr20 50531962 50532056 -16135949 + L1MCa LINE L1 1972 2065 -4361 186 67 67 0 chr20 50532061 50532106 -16135899 + (TA)n Simple_repeat Simple_repeat 1 48 0 1848 40 22 0 chr20 50532114 50532339 -16135666 - L1PA8 LINE L1 -1 6171 5942 342 324 63 7 chr20 50532403 50532545 -16135460 - L2 LINE L2 -256 3057 2908 379 293 85 18 chr20 50532602 50532766 -16135239 + L2 LINE L2 2911 3085 -228 353 238 99 0 chr20 50532856 50532957 -16135048 - L1ME3 LINE L1 -56 6106 5996 1899 127 20 3 chr20 50532966 50533265 -16134740 + AluSx SINE Alu 1 304 -8 279 282 54 74 chr20 50533348 50533497 -16134508 - MER5B DNA MER1_type -7 171 26 * 406 301 26 46 chr20 50533369 50533522 -16134483 + MER5A DNA MER1_type 40 189 0 727 273 40 47 chr20 50533525 50533778 -16134227 + MIR SINE MIR 12 262 0 525 195 39 23 chr20 50533771 50533899 -16134106 + L2 LINE L2 3149 3278 -35 * 273 130 0 0 chr20 50534082 50534128 -16133877 - HSMAR2 DNA Mariner -59 1243 1198 2037 117 0 7 chr20 50534129 50534419 -16133586 - AluSx SINE Alu -18 294 7 252 230 92 61 chr20 50534430 50534626 -16133379 - L1ME4a LINE L1 0 6121 5920 282 176 68 0 chr20 50534764 50534838 -16133167 + MER116 DNA Mariner 2 80 0 1721 132 68 0 chr20 50534865 50535146 -16132859 - AluSx SINE Alu -12 300 1 931 106 8 0 chr20 50535146 50535278 -16132727 - AluSg SINE Alu -177 133 1 1434 230 78 60 chr20 50535284 50535732 -16132273 + MLT1J LTR MaLR 47 502 -9 247 291 194 10 chr20 50535792 50535895 -16132110 - MER5A DNA MER1_type -22 167 46 228 316 162 22 chr20 50535793 50535929 -16132076 + MER5A DNA MER1_type 35 189 0 * 237 214 60 94 chr20 50535940 50536018 -16131987 - L1ME4a LINE L1 -302 5819 5745 2043 115 0 3 chr20 50536018 50536306 -16131699 - AluSg SINE Alu -15 295 9 237 214 60 94 chr20 50536306 50536344 -16131661 - L1ME4a LINE L1 -376 5745 5707 536 316 47 5 chr20 50536692 50536885 -16131120 + Charlie8 DNA MER1_type 75 275 -2142 27 0 0 0 chr20 50537080 50537107 -16130898 + AT_rich Low_complexity Low_complexity 1 27 0 268 119 0 0 chr20 50537134 50537176 -16130829 - Tigger5 DNA MER2_type -186 2137 2096 279 244 37 12 chr20 50537187 50537269 -16130736 - MIR SINE MIR -82 180 97 1549 154 75 0 chr20 50537315 50537614 -16130391 + AluJo SINE Alu 1 319 0 1436 220 16 76 chr20 50537871 50538066 -16129939 - MER47B DNA MER2_type -1905 418 213 2052 131 0 3 chr20 50538066 50538353 -16129652 + AluSx SINE Alu 1 288 -24 213 65 0 0 chr20 50538353 50538384 -16129621 + (CATA)n Simple_repeat Simple_repeat 2 32 0 1436 220 16 76 chr20 50538394 50538643 -16129362 - MER47B DNA MER2_type -2110 213 1 311 281 79 9 chr20 50538725 50538839 -16129166 + L2 LINE L2 3192 3313 0 1099 237 111 29 chr20 50539289 50539639 -16128366 + LTR33A LTR ERVL 145 523 0 2418 67 0 10 chr20 50540318 50540632 -16127373 - AluY SINE Alu 0 311 1 293 210 25 25 chr20 50540778 50540859 -16127146 - L1MC4a LINE L1 -1913 5895 5815 259 164 33 0 chr20 50540893 50540954 -16127051 + (TA)n Simple_repeat Simple_repeat 1 63 0 814 281 138 6 chr20 50540954 50541303 -16126702 - L1MC4a LINE L1 -2002 5806 5412 221 200 80 0 chr20 50541810 50541860 -16126145 - MIR3 SINE MIR -39 169 116 386 173 36 36 chr20 50541930 50542040 -16125965 - L1MD3 LINE L1 -1 7994 7885 2144 85 7 7 chr20 50542146 50542440 -16125565 - AluSq SINE Alu -19 294 1 308 189 57 82 chr20 50542778 50542900 -16125105 - MLT1J LTR MaLR -323 188 70 432 0 0 0 chr20 50543039 50543087 -16124918 + (TC)n Simple_repeat Simple_repeat 1 48 0 1989 140 0 0 chr20 50543088 50543381 -16124624 - AluSx SINE Alu -19 293 1 785 301 57 59 chr20 50544049 50544471 -16123534 + MLT1L LTR MaLR 148 568 -47 24 32 0 0 chr20 50544609 50544640 -16123365 + AT_rich Low_complexity Low_complexity 1 31 0 30 27 0 0 chr20 50544860 50544897 -16123108 + AT_rich Low_complexity Low_complexity 1 37 0 2315 97 0 3 chr20 50544905 50545213 -16122792 - AluSq SINE Alu -6 307 1 1256 221 32 25 chr20 50545213 50545493 -16122512 - AluJo SINE Alu -30 282 1 191 154 26 26 chr20 50545693 50545732 -16122273 + L2 LINE L2 1104 1142 -2172 336 240 273 13 chr20 50546101 50546251 -16121754 - MLT1K LTR MaLR 0 588 400 2077 110 7 0 chr20 50546295 50546587 -16121418 - AluSx SINE Alu -18 294 1 332 226 12 12 chr20 50546595 50546679 -16121326 - HAL1 LINE L1 -4 2503 2420 * 1062 254 145 30 chr20 50546667 50547163 -16120842 - HAL1 LINE L1 -295 2212 1660 1361 242 15 15 chr20 50547225 50547506 -16120499 + L1ME1 LINE L1 5792 6075 -91 4788 94 11 2 chr20 50547506 50548144 -16119861 - LTR9B LTR ERV1 0 644 1 1361 242 15 15 chr20 50548144 50548188 -16119817 + L1ME1 LINE L1 6074 6117 -49 2875 228 29 24 chr20 50548256 50548830 -16119175 + MER82 DNA MER2_type 27 606 -47 2301 126 53 5 chr20 50548830 50549210 -16118795 - MER48 LTR ERV1 0 398 1 2875 228 29 24 chr20 50549210 50549259 -16118746 + MER82 DNA MER2_type 606 653 0 1845 142 10 7 chr20 50549287 50549597 -16118408 + AluJb SINE Alu 1 311 -1 2921 243 78 83 chr20 50549597 50550317 -16117688 - HAL1 LINE L1 -952 1555 844 1645 118 24 0 chr20 50550317 50550571 -16117434 - AluSx SINE Alu -24 288 29 2921 243 78 83 chr20 50550571 50551254 -16116751 - HAL1 LINE L1 -1663 844 159 715 202 40 45 chr20 50551254 50551452 -16116553 - LTR37A LTR ERV1 0 426 230 378 140 0 0 chr20 50551453 50551510 -16116495 - MLT1D LTR MaLR -1 504 448 3936 95 122 5 chr20 50551519 50552110 -16115895 - MER4A LTR ERV1 0 664 5 1979 163 95 29 chr20 50552160 50552572 -16115433 - MLT1D LTR MaLR -66 439 1 659 202 60 77 chr20 50552572 50552802 -16115203 - LTR37A LTR ERV1 -193 233 8 241 278 52 10 chr20 50552809 50552906 -16115099 - HAL1 LINE L1 -2345 162 62 228 241 17 0 chr20 50552953 50553011 -16114994 - MLT1K LTR MaLR -172 416 358 25 31 0 0 chr20 50553045 50553077 -16114928 + AT_rich Low_complexity Low_complexity 1 32 0 2158 109 14 7 chr20 50553098 50553391 -16114614 - AluSx SINE Alu -17 295 1 1913 174 52 98 chr20 50553586 50554087 -16113918 + MLT1D LTR MaLR 12 489 -16 371 175 50 0 chr20 50554115 50554195 -16113810 + LTR37A LTR ERV1 234 317 -109 * 661 162 77 0 chr20 50554186 50554303 -16113702 + MLT1D LTR MaLR 342 467 -38 2283 123 0 0 chr20 50554323 50554633 -16113372 - AluSx SINE Alu -2 310 1 3621 245 16 36 chr20 50554734 50555044 -16112961 - L1M4c LINE L1 -4457 1927 1612 1987 139 21 0 chr20 50555044 50555332 -16112673 - AluSx SINE Alu -18 294 1 3621 245 16 36 chr20 50555332 50556262 -16111743 - L1M4c LINE L1 -4772 1612 799 893 272 47 51 chr20 50556420 50556837 -16111168 - L1M4c LINE L1 -5523 780 174 354 342 79 5 chr20 50557113 50557303 -16110702 + MIR SINE MIR 59 262 0 321 210 16 16 chr20 50557488 50557550 -16110455 - MER81 DNA DNA -38 76 15 186 189 0 0 chr20 50557662 50557699 -16110306 + (ATG)n Simple_repeat Simple_repeat 2 38 0 2221 122 0 0 chr20 50557727 50558030 -16109975 - AluSx SINE Alu -9 303 1 270 200 0 0 chr20 50558035 50558085 -16109920 - MIR SINE MIR -41 221 172 934 115 0 0 chr20 50558235 50558365 -16109640 - AluSg/x SINE Alu -3 309 180 226 301 60 12 chr20 50558384 50558467 -16109538 - MER5A DNA MER1_type -65 124 38 2316 145 24 19 chr20 50558642 50559014 -16108991 - THE1C LTR MaLR 0 375 2 9383 103 113 5 chr20 50559020 50560440 -16107565 - THE1C-int LTR MaLR -6 1574 1 1461 119 37 67 chr20 50560440 50560483 -16107522 - THE1C LTR MaLR 0 375 332 2246 101 27 7 chr20 50560483 50560780 -16107225 + AluSx SINE Alu 1 303 -9 1461 119 37 67 chr20 50560780 50561005 -16107000 - THE1C LTR MaLR -43 332 115 40 59 0 0 chr20 50561242 50561310 -16106695 + AT_rich Low_complexity Low_complexity 1 68 0 605 252 50 0 chr20 50561367 50561526 -16106479 - MIR SINE MIR -31 231 65 360 257 264 7 chr20 50561657 50561805 -16106200 - MER5A DNA MER1_type 0 189 4 221 257 95 14 chr20 50561811 50561885 -16106120 - MIR SINE MIR -64 144 65 1879 162 0 58 chr20 50561980 50562307 -16105698 - AluJb SINE Alu -3 309 2 546 244 69 18 chr20 50562420 50562637 -16105368 - LTR16C LTR ERVL 0 491 264 1230 172 138 82 chr20 50562641 50562995 -16105010 - MLT1A2 LTR MaLR 0 374 1 1305 194 30 30 chr20 50563006 50563310 -16104695 + MER33 DNA MER1_type 1 304 -20 931 95 0 0 chr20 50563312 50563438 -16104567 - AluSp/q SINE Alu 0 313 188 206 246 18 18 chr20 50565133 50565190 -16102815 + CT-rich Low_complexity Low_complexity 2 58 0 2359 88 0 10 chr20 50565291 50565599 -16102406 - AluSg SINE Alu -1 309 5 2364 129 36 17 chr20 50565887 50566244 -16101761 + THE1B LTR MaLR 1 364 0 2317 105 0 0 chr20 50566412 50566707 -16101298 - AluSc SINE Alu -13 296 2 582 180 17 151 chr20 50566711 50566950 -16101055 - L1MA9 LINE L1 -3 6288 6082 29 0 0 0 chr20 50566995 50567024 -16100981 + AT_rich Low_complexity Low_complexity 1 29 0 1839 133 9 75 chr20 50567035 50567366 -16100639 + MER1B DNA MER1_type 31 339 0 987 182 35 0 chr20 50567366 50567536 -16100469 + AluJb SINE Alu 116 291 -21 611 63 0 0 chr20 50567677 50567756 -16100249 + L1MA1 LINE L1 6224 6302 0 1907 172 0 3 chr20 50567821 50568123 -16099882 - AluJo SINE Alu -11 301 1 188 83 0 56 chr20 50570054 50570090 -16097915 + (TTCTCC)n Simple_repeat Simple_repeat 5 38 0 1386 213 113 3 chr20 50570765 50571075 -16096930 - MER2 DNA MER2_type 0 344 1 208 279 59 26 chr20 50571243 50571365 -16096640 - MER5A DNA MER1_type -8 170 56 1099 100 0 13 chr20 50571546 50571696 -16096309 - AluY SINE Alu -163 148 1 1847 174 6 0 chr20 50571697 50572019 -16095986 - L1MA8 LINE L1 -256 6035 5712 1214 122 6 6 chr20 50572021 50572201 -16095804 - L1M2 LINE L1 -505 5786 5607 2054 128 0 7 chr20 50572377 50572665 -16095340 - AluSx SINE Alu -24 288 3 716 246 44 52 chr20 50574076 50574324 -16093681 - MIR SINE MIR -16 246 1 2349 160 27 7 chr20 50574725 50575131 -16092874 + MSTB LTR MaLR 1 414 -12 311 294 24 40 chr20 50575196 50575322 -16092683 + LTR67 LTR ERVL 434 557 0 413 254 45 52 chr20 50575365 50575499 -16092506 - MIR SINE MIR -99 163 31 420 285 13 46 chr20 50575610 50575761 -16092244 + MIR SINE MIR 106 251 -11 2440 69 7 3 chr20 50575840 50576143 -16091862 + AluY SINE Alu 1 304 -7 21 0 0 0 chr20 50576144 50576165 -16091840 + AT_rich Low_complexity Low_complexity 1 21 0 244 330 50 0 chr20 50576393 50576493 -16091512 + MIR SINE MIR 47 151 -111 984 176 5 54 chr20 50576770 50576974 -16091031 + MER3 DNA MER1_type 3 196 -13 826 161 0 39 chr20 50577243 50577373 -16090632 - FLAM_A SINE Alu -8 125 1 526 236 0 0 chr20 50578065 50578154 -16089851 - FLAM_A SINE Alu -48 94 6 600 156 21 0 chr20 50578704 50578800 -16089205 - MER81 DNA DNA -16 98 1 1716 164 17 7 chr20 50578938 50579230 -16088775 + AluJo SINE Alu 15 309 -3 1559 241 71 10 chr20 50579251 50579645 -16088360 - LTR16C LTR ERVL 0 491 74 325 70 0 0 chr20 50579663 50579706 -16088299 + MADE1 DNA Mariner 1 43 -37 701 276 106 9 chr20 50579845 50580175 -16087830 - MER113 DNA MER1_type? -1 520 159 2127 127 37 0 chr20 50580410 50580710 -16087295 + AluSx SINE Alu 2 312 0 2097 96 18 7 chr20 50581889 50582195 -16085810 - AluSq SINE Alu 0 310 2 249 294 90 28 chr20 50582731 50582908 -16085097 - L1MC4a LINE L1 -1860 5948 5761 390 21 0 0 chr20 50582939 50582986 -16085019 + (TC)n Simple_repeat Simple_repeat 2 48 0 470 191 19 0 chr20 50582986 50583091 -16084914 + (CATA)n Simple_repeat Simple_repeat 2 108 0 1842 166 0 0 chr20 50583091 50583381 -16084624 - AluJb SINE Alu -22 290 1 2317 115 3 0 chr20 50583533 50583845 -16084160 - AluSp SINE Alu 0 313 1 275 288 23 30 chr20 50584339 50584471 -16083534 + GA-rich Low_complexity Low_complexity 1 131 0 26 30 0 0 chr20 50584640 50584673 -16083332 + AT_rich Low_complexity Low_complexity 1 33 0 41 21 0 0 chr20 50584688 50584736 -16083269 + AT_rich Low_complexity Low_complexity 1 48 0 818 208 44 6 chr20 50585370 50585553 -16082452 - MER21B LTR ERV1 -371 492 303 935 275 102 23 chr20 50586029 50586502 -16081503 + LTR67 LTR ERVL 42 551 -6 645 298 87 18 chr20 50586639 50587006 -16080999 + L1MB7 LINE L1 5373 5784 -337 2294 125 47 33 chr20 50587047 50587406 -16080599 + THE1B LTR MaLR 1 364 0 2075 153 137 11 chr20 50587835 50588215 -16079790 + MSTA LTR MaLR 1 428 0 2457 77 0 0 chr20 50588799 50589097 -16078908 - AluY SINE Alu -12 299 2 231 36 0 0 chr20 50589342 50589355 -16078650 + (CA)n Simple_repeat Simple_repeat 1 41 0 231 36 0 0 chr20 50589355 50589383 -16078622 + (CA)n Simple_repeat Simple_repeat 2 29 0 605 269 81 79 chr20 50589653 50590136 -16077869 + MLT1J LTR MaLR 3 486 -25 699 170 22 15 chr20 50590149 50590284 -16077721 - L1MB5 LINE L1 0 6174 6039 407 301 148 10 chr20 50590379 50590575 -16077430 + MLT1K LTR MaLR 17 239 -349 373 319 96 26 chr20 50590626 50590855 -16077150 + MLT1K LTR MaLR 326 570 -18 233 195 61 85 chr20 50590877 50590891 -16077114 - MIR SINE MIR -104 158 145 222 105 0 0 chr20 50590891 50590929 -16077076 + (TAG)n Simple_repeat Simple_repeat 1 38 0 233 195 61 85 chr20 50590929 50590996 -16077009 - MIR SINE MIR -117 145 79 297 309 52 22 chr20 50591872 50592008 -16075997 - LTR67 LTR ERVL -2 555 416 234 206 15 29 chr20 50592273 50592341 -16075664 - MLT1J2 LTR MaLR -121 329 263 1385 270 128 30 chr20 50592434 50593222 -16074783 + L2 LINE L2 2430 3313 0 255 298 111 42 chr20 50593531 50593793 -16074212 - MLT1J LTR MaLR -1 510 231 198 300 40 80 chr20 50593999 50594099 -16073906 - MIR SINE MIR -165 97 2 1622 166 24 3 chr20 50594175 50594464 -16073541 + L1MB7 LINE L1 5889 6183 -1 1980 126 28 0 chr20 50594473 50594759 -16073246 + AluSx SINE Alu 1 294 -18 437 271 97 0 chr20 50595216 50595360 -16072645 - MER5B DNA MER1_type -7 171 14 888 202 84 10 chr20 50595368 50595571 -16072434 + MER20 DNA MER1_type 2 219 0 4248 127 33 75 chr20 50595730 50595766 -16072239 + L1MB1 LINE L1 5405 5441 -727 1730 142 26 33 chr20 50595766 50596069 -16071936 + AluJo SINE Alu 1 301 -11 4248 127 33 75 chr20 50596069 50596525 -16071480 + L1MB1 LINE L1 5441 5853 -315 2937 104 21 39 chr20 50596525 50596718 -16071287 + MSTA LTR MaLR 1 196 -232 2427 76 0 25 chr20 50596718 50597033 -16070972 + AluSp SINE Alu 1 307 -6 2937 104 21 39 chr20 50597033 50597273 -16070732 + MSTA LTR MaLR 196 426 -2 4248 127 33 75 chr20 50597273 50597577 -16070428 + L1MB1 LINE L1 5853 6168 0 596 240 11 56 chr20 50598357 50598499 -16069506 + MER5B DNA MER1_type 4 138 -40 3775 62 13 7 chr20 50598499 50598949 -16069056 + MLT2A2 LTR ERVL 1 453 0 596 240 11 56 chr20 50598949 50598985 -16069020 + MER5B DNA MER1_type 138 174 -4 389 268 16 16 chr20 50599252 50599379 -16068626 + LTR67 LTR ERVL 428 554 -3 850 262 62 79 chr20 50600032 50600513 -16067492 - MLT1K LTR MaLR -3 473 1 432 213 118 29 chr20 50600530 50600666 -16067339 + MER63 DNA MER1_type 7 780 -282 2674 94 14 19 chr20 50601249 50601612 -16066393 - THE1B LTR MaLR 0 364 4 262 350 122 25 chr20 50601739 50601936 -16066069 - L2 LINE L2 -527 2787 2572 1340 260 183 87 chr20 50602407 50603151 -16064854 - HAL1 LINE L1 -815 1692 1020 1830 154 0 24 chr20 50603151 50603443 -16064562 + AluJb SINE Alu 1 285 -27 1340 260 183 87 chr20 50603443 50604243 -16063762 - HAL1 LINE L1 -1487 1020 1 593 242 0 8 chr20 50604805 50604933 -16063072 - L2 LINE L2 0 3313 3187 426 259 119 22 chr20 50604991 50605176 -16062829 - L1MC4a LINE L1 -1897 5911 5709 622 285 36 25 chr20 50605176 50605450 -16062555 - L1MC4a LINE L1 -2020 5788 5512 204 40 0 0 chr20 50605688 50605713 -16062292 + (A)n Simple_repeat Simple_repeat 1 25 0 1604 145 46 28 chr20 50605784 50606067 -16061938 + AluJo SINE Alu 6 293 -19 333 68 0 0 chr20 50606210 50606254 -16061751 + (TTCC)n Simple_repeat Simple_repeat 1 44 0 2239 119 0 0 chr20 50606254 50606557 -16061448 - AluSg1 SINE Alu -6 303 1 195 42 0 0 chr20 50609056 50609080 -16058925 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 381 43 0 0 chr20 50609944 50609991 -16058014 + (TG)n Simple_repeat Simple_repeat 1 47 0 185 206 0 0 chr20 50610008 50610042 -16057963 + MIR SINE MIR 222 255 -7 762 201 17 34 chr20 50610433 50610612 -16057393 + MER96B DNA MER1_type? 2 177 -240 1031 155 24 4 chr20 50610621 50610807 -16057198 + L1PA16 LINE L1 5854 6040 -126 1383 205 50 7 chr20 50610811 50611094 -16056911 + AluJb SINE Alu 5 299 -13 2410 74 0 3 chr20 50611131 50611428 -16056577 + AluY SINE Alu 1 296 -15 893 139 0 0 chr20 50611429 50611558 -16056447 + L1PA16 LINE L1 6029 6157 -9 468 148 17 52 chr20 50611931 50612046 -16055959 + MER96B DNA MER1_type? 194 304 -113 310 50 138 12 chr20 50612048 50612128 -16055877 + (CTTTA)n Simple_repeat Simple_repeat 2 91 0 2063 145 0 0 chr20 50612128 50612431 -16055574 - AluSx SINE Alu -9 303 1 470 216 8 90 chr20 50612434 50612463 -16055542 - MER96B DNA MER1_type? -293 124 94 2152 106 3 19 chr20 50612463 50612775 -16055230 + AluSq SINE Alu 7 313 0 470 216 8 90 chr20 50612775 50612879 -16055126 - MER96B DNA MER1_type? -323 94 2 1964 147 13 0 chr20 50612936 50613235 -16054770 - AluJo SINE Alu -5 307 5 706 318 99 3 chr20 50613405 50613707 -16054298 + LTR16C LTR ERVL 149 479 -12 381 239 18 44 chr20 50613718 50613831 -16054174 - MIR SINE MIR -139 123 14 1695 194 38 0 chr20 50613848 50614168 -16053837 + MER58B DNA MER1_type 10 341 0 374 275 107 27 chr20 50614184 50614333 -16053672 + MIR SINE MIR 59 219 -43 492 215 8 46 chr20 50615071 50615201 -16052804 + MER20 DNA MER1_type 88 212 -7 220 315 10 112 chr20 50615229 50615426 -16052579 + L2 LINE L2 2671 2847 -467 344 306 109 20 chr20 50615617 50615764 -16052241 + L2 LINE L2 3112 3271 -1 2077 109 41 3 chr20 50615835 50616129 -16051876 - AluSq SINE Alu -8 305 1 32 26 0 0 chr20 50616306 50616345 -16051660 + AT_rich Low_complexity Low_complexity 1 39 0 817 138 6 94 chr20 50616371 50616436 -16051569 - LTR40b LTR ERVL 0 462 393 1834 126 0 108 chr20 50616436 50616777 -16051228 - AluSx SINE Alu -8 304 1 817 138 6 94 chr20 50616777 50616871 -16051134 - LTR40b LTR ERVL -69 393 317 441 217 11 11 chr20 50616877 50616969 -16051036 + LTR40a LTR ERVL 319 410 -109 256 268 55 67 chr20 50617113 50617277 -16050728 + L2 LINE L2 2492 2653 -661 322 306 125 0 chr20 50617288 50617432 -16050573 + MIR SINE MIR 100 261 -1 752 258 206 11 chr20 50619426 50619775 -16048230 - MLT1H LTR MaLR 0 549 133 1782 133 25 73 chr20 50619812 50620128 -16047877 - AluJo SINE Alu -11 301 1 379 241 70 57 chr20 50620229 50620387 -16047618 - MIR SINE MIR -68 194 35 646 338 28 42 chr20 50620719 50621077 -16046928 + LTR67 LTR ERVL 194 546 -11 2185 114 61 22 chr20 50621466 50621827 -16046178 + THE1C LTR MaLR 1 375 0 206 316 18 0 chr20 50622690 50622747 -16045258 - L2 LINE L2 -1 3271 3214 200 324 28 0 chr20 50623897 50623968 -16044037 - L2 LINE L2 -528 2786 2714 1111 113 6 40 chr20 50623979 50624156 -16043849 + AluSg/x SINE Alu 142 312 0 580 305 135 3 chr20 50624735 50625058 -16042947 + L2 LINE L2 2758 3137 -176 467 73 15 0 chr20 50625086 50625154 -16042851 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 251 269 0 0 chr20 50625177 50625229 -16042776 + L2 LINE L2 3254 3305 -8 905 187 73 73 chr20 50625381 50625600 -16042405 - MER20 DNA MER1_type 0 219 1 181 200 0 25 chr20 50626364 50626404 -16041601 - L2 LINE L2 -12 3301 3263 * 645 234 102 34 chr20 50626370 50626605 -16041400 - MIR SINE MIR -11 251 1 325 301 109 68 chr20 50626760 50626893 -16041112 - L2 LINE L2 -650 2664 2538 813 179 0 22 chr20 50626893 50627027 -16040978 - FLAM_A SINE Alu -1 132 2 325 301 109 68 chr20 50627027 50627259 -16040746 - L2 LINE L2 -776 2538 2284 793 271 10 0 chr20 50627865 50628064 -16039941 + MIR SINE MIR 62 262 0 1067 258 54 46 chr20 50628117 50628486 -16039519 - Charlie8 DNA MER1_type -1989 428 57 248 298 18 0 chr20 50628538 50628595 -16039410 - Charlie8 DNA MER1_type -2359 58 1 24 0 0 0 chr20 50628988 50629012 -16038993 + AT_rich Low_complexity Low_complexity 1 24 0 221 254 0 17 chr20 50629397 50629456 -16038549 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 285 29 0 0 chr20 50629851 50629885 -16038120 + (TG)n Simple_repeat Simple_repeat 1 34 0 1232 157 42 17 chr20 50630186 50630422 -16037583 + MER96B DNA MER1_type? 12 253 -164 257 73 0 24 chr20 50630433 50630474 -16037531 + (TA)n Simple_repeat Simple_repeat 2 41 0 189 147 0 0 chr20 50630485 50630519 -16037486 + (TG)n Simple_repeat Simple_repeat 2 35 0 639 216 39 7 chr20 50630520 50630673 -16037332 + MER96B DNA MER1_type? 260 417 0 2153 134 0 13 chr20 50631143 50631457 -16036548 - AluSx SINE Alu -2 310 1 321 349 51 17 chr20 50631634 50631809 -16036196 - MIR SINE MIR -70 192 12 207 139 0 0 chr20 50632014 50632050 -16035955 + (CA)n Simple_repeat Simple_repeat 1 36 0 524 214 36 21 chr20 50632168 50632308 -16035697 - LTR67 LTR ERVL -2 555 414 1604 229 60 10 chr20 50632667 50633052 -16034953 - LTR16C LTR ERVL -4 487 84 193 244 103 13 chr20 50633874 50633952 -16034053 + MIR SINE MIR 52 136 -126 305 180 0 0 chr20 50634784 50634845 -16033160 - L1MD3 LINE L1 -5 7990 7930 320 294 112 76 chr20 50635026 50635131 -16032874 - L2 LINE L2 -1 3271 3171 405 0 0 0 chr20 50635131 50635176 -16032829 + (CA)n Simple_repeat Simple_repeat 2 46 0 320 294 112 76 chr20 50635176 50635400 -16032605 - L2 LINE L2 -101 3171 2930 211 256 15 75 chr20 50635703 50635836 -16032169 - MIR SINE MIR 0 262 138 * 251 188 0 21 chr20 50635835 50635883 -16032122 - MIR SINE MIR -5 257 211 1108 192 4 52 chr20 50635884 50636072 -16031933 + MER58A DNA MER1_type 7 184 -2236 2522 52 7 10 chr20 50636072 50636379 -16031626 - AluY SINE Alu -5 306 1 1108 192 4 52 chr20 50636379 50636419 -16031586 + MER58A DNA MER1_type 184 224 0 844 268 63 56 chr20 50636518 50636914 -16031091 + MLT1J1 LTR MaLR 48 446 0 589 245 7 32 chr20 50637164 50637319 -16030686 - MLT1J LTR MaLR -317 194 44 2262 91 10 13 chr20 50637322 50637631 -16030374 + AluSg1 SINE Alu 2 309 0 727 257 34 34 chr20 50637799 50638036 -16029969 - MIR SINE MIR -3 259 23 1132 171 0 0 chr20 50638094 50638264 -16029741 + FAM SINE Alu 1 170 -5 2441 59 0 0 chr20 50638341 50638627 -16029378 + L1PA8 LINE L1 5883 6168 -4 23 33 0 0 chr20 50638672 50638702 -16029303 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr20 50638774 50638798 -16029207 + AT_rich Low_complexity Low_complexity 1 24 0 840 210 79 42 chr20 50638887 50639101 -16028904 + MER58A DNA MER1_type 3 224 0 262 254 0 28 chr20 50639181 50639252 -16028753 + (CATA)n Simple_repeat Simple_repeat 4 72 0 306 229 51 51 chr20 50639294 50639429 -16028576 - L1MC4a LINE L1 -319 5802 5723 4325 101 2 0 chr20 50640530 50641083 -16026922 + MER41A LTR ERV1 1 554 0 547 300 117 7 chr20 50641124 50641414 -16026591 + MLT1J LTR MaLR 4 325 -186 694 313 28 73 chr20 50642397 50642863 -16025142 - MLT1K LTR MaLR -17 571 127 850 302 14 5 chr20 50643098 50643320 -16024685 + MER58A DNA MER1_type 1 224 0 450 307 127 4 chr20 50643749 50643977 -16024028 + L2 LINE L2 2716 2971 -343 332 299 114 24 chr20 50644103 50644314 -16023691 - L2 LINE L2 -4 3309 3080 2099 106 26 35 chr20 50644668 50644979 -16023026 - AluSx SINE Alu -4 308 1 1047 231 42 5 chr20 50645023 50645239 -16022766 - MER58A DNA MER1_type 0 224 1 272 226 11 0 chr20 50645986 50646079 -16021926 + CT-rich Low_complexity Low_complexity 4 97 0 1992 146 13 0 chr20 50646079 50646387 -16021618 - AluSx SINE Alu 0 312 1 238 415 12 0 chr20 50646434 50646516 -16021489 + L2 LINE L2 3123 3205 -67 507 305 100 4 chr20 50646788 50647138 -16020867 + LTR16C LTR ERVL 85 491 0 536 266 53 37 chr20 50647139 50647327 -16020678 - MLT1L LTR MaLR -82 533 343 1172 158 5 29 chr20 50648803 50649012 -16018993 - MER3 DNA MER1_type -5 204 1 199 237 0 0 chr20 50649019 50649057 -16018948 - L2 LINE L2 -73 3240 3203 541 208 72 8 chr20 50649163 50649288 -16018717 - MER45A DNA AcHobo 0 178 46 219 324 106 27 chr20 50649311 50649567 -16018438 - L2 LINE L2 -167 3105 2830 23 33 0 0 chr20 50650371 50650401 -16017604 + AT_rich Low_complexity Low_complexity 1 30 0 1863 155 24 7 chr20 50651196 50651492 -16016513 - AluJo SINE Alu -7 305 5 940 184 60 60 chr20 50652403 50652620 -16015385 + MER20 DNA MER1_type 3 219 0 192 152 0 0 chr20 50652971 50653004 -16015001 + CT-rich Low_complexity Low_complexity 2 34 0 1088 69 35 6 chr20 50653012 50653186 -16014819 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 955 37 0 0 chr20 50653195 50653302 -16014703 - L1PA5 LINE L1 -9 6145 6039 414 21 0 0 chr20 50653302 50653350 -16014655 + L1PA4 LINE L1 5901 5948 -207 802 79 32 0 chr20 50653353 50653479 -16014526 + (TTTC)n Simple_repeat Simple_repeat 4 133 0 1169 159 14 36 chr20 50653612 50653832 -16014173 + MER20 DNA MER1_type 4 218 -1 565 305 31 44 chr20 50654282 50654548 -16013457 + MIR SINE MIR 3 262 0 1243 264 61 33 chr20 50655139 50655567 -16012438 + MLT1K LTR MaLR 140 579 -9 228 203 136 0 chr20 50655692 50655751 -16012254 + MIR3 SINE MIR 121 187 -21 29 70 0 0 chr20 50655970 50656027 -16011978 + AT_rich Low_complexity Low_complexity 1 57 0 22 0 0 0 chr20 50656257 50656279 -16011726 + AT_rich Low_complexity Low_complexity 1 22 0 1225 277 50 52 chr20 50656317 50656824 -16011181 - L2 LINE L2 0 3313 2802 1100 184 18 28 chr20 50656824 50657042 -16010963 - MER20 DNA MER1_type 0 219 4 1225 277 50 52 chr20 50657042 50657125 -16010880 - L2 LINE L2 -511 2802 2720 353 287 35 0 chr20 50657917 50658032 -16009973 + L2 LINE L2 2690 2808 -506 1310 251 13 0 chr20 50658033 50658344 -16009661 - MER58B DNA MER1_type 0 341 27 2206 106 10 0 chr20 50658378 50658670 -16009335 + AluSx SINE Alu 1 295 -17 709 217 92 0 chr20 50658798 50658950 -16009055 - MER58A DNA MER1_type 0 166 1 309 54 0 0 chr20 50659002 50659039 -16008966 - MSTA LTR MaLR 0 428 392 2092 114 21 14 chr20 50659043 50659333 -16008672 + AluSx SINE Alu 1 292 -20 503 239 102 21 chr20 50659333 50659484 -16008521 - MER33 DNA MER1_type -255 69 1 396 315 38 16 chr20 50660063 50660247 -16007758 + MER117 DNA MER1_type 7 194 -3 536 251 31 31 chr20 50660574 50660765 -16007240 + MER117 DNA MER1_type 7 197 0 276 280 21 21 chr20 50660799 50660892 -16007113 + MER117 DNA MER1_type 105 197 0 190 290 48 65 chr20 50661116 50661364 -16006641 - L2 LINE L2 -211 3061 2818 1671 166 3 48 chr20 50661897 50662211 -16005794 - AluJb SINE Alu -12 300 1 21 0 0 0 chr20 50665223 50665244 -16002761 + AT_rich Low_complexity Low_complexity 1 21 0 16044 131 17 11 chr20 50665670 50668074 -15999931 + Tigger1 DNA MER2_type 1 2418 0 276 317 12 0 chr20 50668979 50669061 -15998944 - LTR67 LTR ERVL -350 207 125 1937 271 23 10 chr20 50669221 50669705 -15998300 + LTR16C LTR ERVL 1 490 -1 406 277 68 14 chr20 50670509 50670657 -15997348 + MER46C DNA MER2_type 96 251 -87 1070 245 98 11 chr20 50670661 50670947 -15997058 - MLT1I LTR MaLR -1 408 98 243 284 0 0 chr20 50671219 50671293 -15996712 - MLT1K LTR MaLR -2 586 513 1206 178 63 83 chr20 50671306 50671738 -15996267 - MLT1D LTR MaLR 0 505 2 779 222 96 15 chr20 50671794 50671992 -15996013 + MER58A DNA MER1_type 2 215 -9 719 305 7 18 chr20 50672001 50672282 -15995723 - MLT1K LTR MaLR -252 336 25 2503 100 47 39 chr20 50673740 50674101 -15993904 - THE1B LTR MaLR 0 364 1 212 256 12 0 chr20 50674346 50674432 -15993573 + (TA)n Simple_repeat Simple_repeat 2 88 0 269 280 11 32 chr20 50674548 50674641 -15993364 - L1MC/D LINE L1 -2031 5777 5687 582 313 127 71 chr20 50674672 50675054 -15992951 - LTR67 LTR ERVL 0 557 147 4592 112 3 26 chr20 50675054 50675579 -15992426 - LTR9 LTR ERV1 0 612 102 2232 113 13 6 chr20 50675579 50675890 -15992115 + AluSq SINE Alu 1 313 0 4592 112 3 26 chr20 50675890 50675990 -15992015 - LTR9 LTR ERV1 -510 102 1 582 313 127 71 chr20 50675990 50676032 -15991973 - LTR67 LTR ERVL -410 147 109 1050 272 66 64 chr20 50676120 50676606 -15991399 - LTR16C LTR ERVL -4 487 1 233 315 0 0 chr20 50677358 50677431 -15990574 - MIR SINE MIR -23 239 167 278 258 138 60 chr20 50677468 50677635 -15990370 + MIR SINE MIR 48 227 -35 483 312 153 0 chr20 50677726 50677883 -15990122 - MER5A DNA MER1_type 0 189 9 225 289 0 13 chr20 50678205 50678281 -15989724 - MIR SINE MIR -33 229 155 658 316 4 22 chr20 50678303 50678534 -15989471 + MIR SINE MIR 13 239 -23 382 169 101 10 chr20 50678643 50678747 -15989258 + MLT1J LTR MaLR 92 267 -338 516 273 39 0 chr20 50678891 50679045 -15988960 + LTR16A LTR ERVL 289 448 -2 1998 45 146 4 chr20 50679216 50679483 -15988522 - AluY SINE Alu -2 309 5 310 280 119 28 chr20 50680003 50680146 -15987859 - MIR SINE MIR -61 201 46 2077 115 16 3 chr20 50680146 50680450 -15987555 - AluSg SINE Alu -2 308 1 304 226 265 10 chr20 50680914 50681016 -15986989 - LTR16A1 LTR ERVL 0 457 330 264 287 32 21 chr20 50681057 50681151 -15986854 - LTR16A1 LTR ERVL -362 95 1 273 239 90 124 chr20 50681269 50681591 -15986414 + MLT1J LTR MaLR 1 311 -200 1015 176 28 0 chr20 50681794 50681976 -15986029 - MER20 DNA MER1_type 0 219 33 349 290 21 55 chr20 50682077 50682222 -15985783 - L2 LINE L2 0 3313 3174 452 47 0 16 chr20 50682231 50682295 -15985710 + (CA)n Simple_repeat Simple_repeat 2 64 0 1005 202 49 45 chr20 50682389 50682612 -15985393 + MER58A DNA MER1_type 1 224 0 824 256 234 11 chr20 50682785 50683401 -15984604 - L2 LINE L2 -227 3086 2321 969 212 22 35 chr20 50683584 50683645 -15984360 - MER58A DNA MER1_type -2196 224 164 1357 213 21 88 chr20 50683645 50684063 -15983942 - MLT1B LTR MaLR 0 390 1 969 212 22 35 chr20 50684063 50684227 -15983778 - MER58A DNA MER1_type -2256 164 2 262 259 0 47 chr20 50684273 50684358 -15983647 + MIR SINE MIR 172 252 -10 198 0 0 0 chr20 50685277 50685299 -15982706 + (A)n Simple_repeat Simple_repeat 1 22 0 2514 221 28 31 chr20 50685411 50685955 -15982050 - MLT1F LTR MaLR 0 542 1 424 263 168 45 chr20 50685963 50686142 -15981863 - MIR SINE MIR -29 233 33 27 29 0 0 chr20 50686437 50686471 -15981534 + AT_rich Low_complexity Low_complexity 1 34 0 329 306 102 0 chr20 50686483 50686640 -15981365 + MIR SINE MIR 90 262 0 21 0 0 0 chr20 50687648 50687669 -15980336 + AT_rich Low_complexity Low_complexity 1 21 0 2145 125 3 7 chr20 50687722 50688026 -15979979 - AluJb SINE Alu -2 310 8 1074 252 135 80 chr20 50688514 50689061 -15978944 + MLT1K LTR MaLR 10 586 -2 248 232 14 29 chr20 50689996 50690065 -15977940 + MLT1J1 LTR MaLR 61 128 -318 3774 205 34 46 chr20 50690185 50690435 -15977570 - L1ME1 LINE L1 -5 6230 5979 1897 116 8 0 chr20 50690435 50690693 -15977312 - AluSx SINE Alu -13 299 40 3774 205 34 46 chr20 50690693 50691477 -15976528 - L1ME1 LINE L1 -256 5979 5215 3116 219 82 12 chr20 50691475 50692364 -15975641 - L1ME1 LINE L1 -3948 2448 1308 * 337 250 59 0 chr20 50692364 50692516 -15975489 + (TA)n Simple_repeat Simple_repeat 1 161 0 2349 244 74 54 chr20 50692523 50693131 -15974874 - L1ME1 LINE L1 -4914 1482 888 459 52 0 0 chr20 50693131 50693189 -15974816 + (TATTG)n Simple_repeat Simple_repeat 3 60 0 216 0 0 0 chr20 50693190 50693214 -15974791 + (TTATG)n Simple_repeat Simple_repeat 2 25 0 2108 127 11 0 chr20 50693217 50693500 -15974505 - AluSx SINE Alu -26 286 1 2349 244 74 54 chr20 50693500 50693870 -15974135 - L1ME1 LINE L1 -5509 887 478 441 353 26 11 chr20 50693883 50694073 -15973932 - L1ME1 LINE L1 -6045 351 159 662 210 111 0 chr20 50694083 50694102 -15973903 - Charlie4 DNA MER1_type -312 196 180 3994 74 4 14 chr20 50694102 50694617 -15973388 - L1PA13 LINE L1 -4 6159 5650 662 210 111 0 chr20 50694617 50694759 -15973246 - Charlie4 DNA MER1_type -328 180 17 453 210 20 0 chr20 50694947 50695047 -15972958 - MER113 DNA MER1_type? -415 106 5 215 322 116 16 chr20 50696117 50696238 -15971767 - L2 LINE L2 -1 3312 3180 304 307 15 58 chr20 50696417 50696587 -15971418 - MIR SINE MIR -56 206 40 271 307 108 18 chr20 50696619 50696785 -15971220 + L2 LINE L2 2584 2764 -550 449 287 31 0 chr20 50696988 50697117 -15970888 - MIR SINE MIR 0 262 130 1182 302 66 46 chr20 50697213 50697667 -15970338 + LTR16B LTR ERVL 2 464 0 355 355 0 22 chr20 50697747 50697885 -15970120 + L2 LINE L2 3136 3270 -2 27 62 0 0 chr20 50698073 50698121 -15969884 + AT_rich Low_complexity Low_complexity 1 48 0 985 198 34 60 chr20 50698361 50698629 -15969376 - L1ME2 LINE L1 -30 6134 5874 185 369 39 39 chr20 50698729 50698832 -15969173 + L2 LINE L2 2867 2969 -303 226 343 68 25 chr20 50698866 50699102 -15968903 + MLT1K LTR MaLR 4 249 -339 871 185 76 93 chr20 50699376 50699570 -15968435 - L1ME2 LINE L1 -10 6154 5965 2059 139 0 13 chr20 50699570 50699873 -15968132 - AluJb SINE Alu -13 299 1 871 185 76 93 chr20 50699873 50699980 -15968025 - L1ME2 LINE L1 -199 5965 5858 309 271 21 10 chr20 50700029 50700125 -15967880 + MLT1K LTR MaLR 492 588 0 269 291 103 84 chr20 50700195 50700398 -15967607 + L2 LINE L2 3107 3313 0 2237 105 0 22 chr20 50700808 50701121 -15966884 - AluSx SINE Alu -6 306 1 313 186 61 13 chr20 50701294 50701369 -15966636 - MLT1I LTR MaLR -22 424 317 409 56 14 56 chr20 50701394 50701465 -15966540 - L1PA16 LINE L1 0 6166 6099 603 214 15 8 chr20 50701576 50701707 -15966298 - MLT1I LTR MaLR -272 137 6 22 0 0 0 chr20 50703280 50703302 -15964703 + AT_rich Low_complexity Low_complexity 1 22 0 241 196 36 54 chr20 50704061 50704117 -15963888 - MER6 DNA MER2_type -367 238 184 246 343 43 7 chr20 50704140 50704280 -15963725 - MIR SINE MIR -115 147 3 1156 207 18 14 chr20 50704307 50704529 -15963476 + MER58A DNA MER1_type 1 223 -1 326 225 146 22 chr20 50704613 50704702 -15963303 + MER103 DNA DNA 2 101 -65 369 0 0 0 chr20 50704753 50704794 -15963211 + (TG)n Simple_repeat Simple_repeat 2 42 0 445 337 150 16 chr20 50705426 50705800 -15962205 - MLT1K LTR MaLR 0 588 165 350 230 240 0 chr20 50706010 50706110 -15961895 + L2 LINE L2 3189 3312 -1 937 227 96 55 chr20 50706174 50706659 -15961346 + MLT1H LTR MaLR 1 549 0 1012 278 103 30 chr20 50707876 50708344 -15959661 + MLT1J LTR MaLR 2 503 -8 236 283 18 62 chr20 50709248 50709361 -15958644 - L2 LINE L2 -1 3312 3205 22 0 0 0 chr20 50709423 50709445 -15958560 + AT_rich Low_complexity Low_complexity 1 22 0 1073 261 39 47 chr20 50709915 50710321 -15957684 - MLT1I LTR MaLR -1 408 6 325 267 75 25 chr20 50710355 50710475 -15957530 + L2 LINE L2 3143 3268 -4 1827 304 56 42 chr20 50710922 50711962 -15956043 + L2 LINE L2 2242 3304 -9 285 124 0 0 chr20 50712239 50712291 -15955714 + MER5A DNA MER1_type 48 98 -80 2480 80 0 10 chr20 50712559 50712873 -15955132 + AluSq SINE Alu 1 311 -2 26 0 0 0 chr20 50713044 50713070 -15954935 + AT_rich Low_complexity Low_complexity 1 26 0 205 299 129 54 chr20 50713109 50713350 -15954655 + L2 LINE L2 2826 3084 -188 21 0 0 0 chr20 50713661 50713682 -15954323 + AT_rich Low_complexity Low_complexity 1 21 0 216 259 17 17 chr20 50714715 50714773 -15953232 + MIR SINE MIR 86 143 -119 999 238 86 45 chr20 50714785 50715167 -15952838 - MER113 DNA MER1_type? -1 520 123 1229 189 89 23 chr20 50715167 50715722 -15952283 + L1MD3 LINE L1 7008 7764 -231 268 87 0 158 chr20 50715722 50715849 -15952156 + (GGTTG)n Simple_repeat Simple_repeat 3 109 0 184 57 0 151 chr20 50715863 50715969 -15952036 + (GGTTG)n Simple_repeat Simple_repeat 3 92 0 400 91 0 159 chr20 50715983 50716191 -15951814 + (GGTTG)n Simple_repeat Simple_repeat 3 177 0 215 123 0 154 chr20 50716205 50716335 -15951670 + (GGTTG)n Simple_repeat Simple_repeat 3 112 0 852 203 46 58 chr20 50716343 50716584 -15951421 + L1MC4a LINE L1 7571 7808 0 786 215 161 5 chr20 50716622 50716808 -15951197 + MER20 DNA MER1_type 1 215 -4 27 0 0 0 chr20 50716833 50716860 -15951145 + AT_rich Low_complexity Low_complexity 1 27 0 489 302 71 6 chr20 50717701 50717883 -15950122 + MIR SINE MIR 5 198 -64 715 272 97 0 chr20 50717919 50718114 -15949891 - MIR SINE MIR -1 261 48 25 31 0 0 chr20 50719319 50719351 -15948654 + AT_rich Low_complexity Low_complexity 1 32 0 239 218 0 36 chr20 50719516 50719571 -15948434 + MIR SINE MIR 102 154 -108 1158 206 93 24 chr20 50719571 50719801 -15948204 + MER46C DNA MER2_type 1 257 -81 1810 191 87 88 chr20 50719801 50720344 -15947661 + MLT1F LTR MaLR 1 542 0 1158 206 93 24 chr20 50720344 50720404 -15947601 + MER46C DNA MER2_type 257 311 -27 250 230 264 0 chr20 50720419 50720506 -15947499 + MIR SINE MIR 153 262 0 213 108 0 0 chr20 50720720 50720757 -15947248 + (T)n Simple_repeat Simple_repeat 1 37 0 717 162 0 22 chr20 50720875 50721011 -15946994 - L1ME1 LINE L1 -5 6161 6029 322 253 0 0 chr20 50722018 50722097 -15945908 + MIR SINE MIR 47 125 -137 2066 107 42 32 chr20 50722282 50722619 -15945386 - AluSq SINE Alu 0 340 1 915 267 37 5 chr20 50722721 50722938 -15945067 - MER58A DNA MER1_type 0 224 1 184 210 25 0 chr20 50723180 50723261 -15944744 + (TGAA)n Simple_repeat Simple_repeat 3 85 0 2088 98 3 7 chr20 50723276 50723561 -15944444 + AluSx SINE Alu 1 284 -28 372 22 0 0 chr20 50723561 50723606 -15944399 + (CA)n Simple_repeat Simple_repeat 2 46 0 198 0 0 0 chr20 50723605 50723627 -15944378 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 * 386 365 41 15 chr20 50723644 50723984 -15944021 + L1M4 LINE L1 5011 5359 -787 408 279 52 0 chr20 50724036 50724172 -15943833 + MLT1L LTR MaLR 473 615 0 1544 199 94 57 chr20 50724365 50724766 -15943239 - MLT1F LTR MaLR -25 517 102 2444 103 106 10 chr20 50724766 50725223 -15942782 + MER1A DNA MER1_type 1 524 -5 575 174 37 0 chr20 50725225 50725334 -15942671 - MLT1F LTR MaLR -429 113 1 266 231 0 0 chr20 50726158 50726210 -15941795 - L2 LINE L2 0 3313 3262 2412 116 134 11 chr20 50726223 50726604 -15941401 + MSTA LTR MaLR 1 428 0 325 258 254 21 chr20 50726873 50727207 -15940798 - L1ME4a LINE L1 -34 6087 5676 331 250 88 37 chr20 50727283 50727551 -15940454 - L1ME4a LINE L1 -564 5557 5272 24 53 0 0 chr20 50727688 50727726 -15940279 + AT_rich Low_complexity Low_complexity 1 38 0 261 317 53 85 chr20 50728155 50728401 -15939604 - L2 LINE L2 -614 2700 2463 262 138 17 35 chr20 50728411 50728469 -15939536 - L1ME4a LINE L1 -11 6110 6054 2207 96 0 0 chr20 50728903 50729185 -15938820 - AluY SINE Alu -13 298 17 321 296 78 65 chr20 50729423 50729856 -15938149 - L1ME4a LINE L1 -1833 4313 3875 245 458 0 0 chr20 50729934 50730065 -15937940 - L2 LINE L2 -4 3268 3138 272 316 0 0 chr20 50730506 50730585 -15937420 + MLT1L LTR MaLR 1 79 -536 417 299 82 79 chr20 50730622 50731014 -15936991 + MLT1J LTR MaLR 119 511 0 496 235 0 0 chr20 50731108 50731206 -15936799 - Tigger7 DNA MER2_type 0 2487 2390 * 1307 220 68 0 chr20 50731204 50731454 -15936551 - Tigger7 DNA MER2_type -2220 267 1 2606 137 2 71 chr20 50732109 50732521 -15935484 + MSTB LTR MaLR 6 386 -40 2345 108 0 0 chr20 50732521 50732826 -15935179 - AluSx SINE Alu -7 305 1 2606 137 2 71 chr20 50732826 50732865 -15935140 + MSTB LTR MaLR 386 426 0 955 91 15 0 chr20 50732938 50733070 -15934935 - AluY SINE Alu -5 306 173 200 246 14 43 chr20 50733548 50733617 -15934388 - MIR SINE MIR -40 222 156 2257 84 21 3 chr20 50733646 50733932 -15934073 + AluY SINE Alu 1 291 -20 1108 281 103 16 chr20 50734833 50735278 -15932727 + LTR16C LTR ERVL 6 489 -2 21 0 0 0 chr20 50735677 50735698 -15932307 + AT_rich Low_complexity Low_complexity 1 21 0 24 67 0 0 chr20 50735748 50735793 -15932212 + AT_rich Low_complexity Low_complexity 1 45 0 216 0 0 0 chr20 50735821 50735845 -15932160 + (TG)n Simple_repeat Simple_repeat 2 25 0 255 257 0 0 chr20 50735845 50735919 -15932086 + (CATA)n Simple_repeat Simple_repeat 2 75 0 817 259 34 65 chr20 50736264 50736342 -15931663 - LTR16A1 LTR ERVL -22 435 356 1561 177 64 4 chr20 50736342 50736653 -15931352 + AluJo SINE Alu 1 327 0 817 259 34 65 chr20 50736653 50736985 -15931020 - LTR16A1 LTR ERVL -101 356 35 5659 83 10 0 chr20 50737134 50737854 -15930151 + L1PB1 LINE L1 5425 6151 0 505 313 148 19 chr20 50737946 50738359 -15929646 + L2 LINE L2 2560 3048 -265 425 317 39 35 chr20 50738360 50738619 -15929386 + MLT1I LTR MaLR 1 260 -149 956 309 75 6 chr20 50738621 50738980 -15929025 - MLT2F LTR ERVL 0 663 280 244 356 42 0 chr20 50738993 50739111 -15928894 - MLT2F LTR ERVL -496 132 10 489 265 34 20 chr20 50739123 50739270 -15928735 + MLT1I LTR MaLR 261 409 0 700 284 18 44 chr20 50739271 50739546 -15928459 + L2 LINE L2 3046 3313 0 2289 104 0 7 chr20 50740246 50740543 -15927462 + AluSx SINE Alu 1 295 -17 1258 141 13 66 chr20 50740866 50741093 -15926912 - AluJb SINE Alu -5 307 93 678 279 50 96 chr20 50741097 50741555 -15926450 + MLT1K LTR MaLR 150 586 -2 657 250 65 6 chr20 50741739 50741907 -15926098 - MER5B DNA MER1_type 0 178 1 34 24 0 0 chr20 50742542 50742583 -15925422 + AT_rich Low_complexity Low_complexity 1 41 0 415 251 139 41 chr20 50742775 50743213 -15924792 - L1ME4a LINE L1 -28 6093 5613 615 273 132 9 chr20 50743755 50743829 -15924176 + MER112 DNA MER1_type 3 67 -193 333 0 0 0 chr20 50743829 50743866 -15924139 + (CA)n Simple_repeat Simple_repeat 2 38 0 615 273 132 9 chr20 50743866 50744011 -15923994 + MER112 DNA MER1_type 67 249 -11 311 128 0 0 chr20 50744063 50744110 -15923895 - L1MC5 LINE L1 -179 7782 7736 * 4606 163 34 2 chr20 50744099 50744933 -15923072 - L1MB2 LINE L1 -53 6118 5259 3377 93 16 0 chr20 50745073 50745516 -15922489 - L1PA15 LINE L1 0 6165 5716 516 253 92 77 chr20 50745631 50745967 -15922038 + MLT1L LTR MaLR 41 381 -234 232 242 125 39 chr20 50746019 50746147 -15921858 + MLT1L LTR MaLR 467 605 -10 2303 103 0 10 chr20 50746201 50746511 -15921494 - AluSc SINE Alu -2 307 1 356 257 50 10 chr20 50746540 50746641 -15921364 + MER5A DNA MER1_type 27 131 -58 1401 200 77 36 chr20 50746694 50747134 -15920871 + LTR37B LTR ERV1 9 466 -2 234 279 204 7 chr20 50747536 50747683 -15920322 + MIR SINE MIR 1 176 -86 398 344 52 0 chr20 50747729 50747883 -15920122 + MIR SINE MIR 31 192 -70 303 283 40 10 chr20 50748031 50748130 -15919875 - L2 LINE L2 -5 3308 3207 712 267 113 43 chr20 50748141 50748512 -15919493 + MER113 DNA MER1_type? 117 513 -8 21 0 0 0 chr20 50750000 50750021 -15917984 + AT_rich Low_complexity Low_complexity 1 21 0 1095 191 29 14 chr20 50750195 50750404 -15917601 + MER58A DNA MER1_type 6 217 -7 648 201 13 82 chr20 50750427 50750554 -15917451 + MIR SINE MIR 31 150 -112 2052 102 3 7 chr20 50750554 50750882 -15917123 + AluSx SINE Alu 1 327 0 648 201 13 82 chr20 50750882 50750910 -15917095 + MIR SINE MIR 150 178 -84 1307 215 102 43 chr20 50750925 50751297 -15916708 + MSTD LTR MaLR 1 394 -2 425 212 212 0 chr20 50751818 50751931 -15916074 - MER58A DNA MER1_type -1 223 87 1772 168 39 84 chr20 50751931 50752148 -15915857 - MSTB1 LTR MaLR -12 420 232 2506 72 0 3 chr20 50752148 50752453 -15915552 - AluY SINE Alu -7 304 1 1772 168 39 84 chr20 50752453 50752675 -15915330 - MSTB1 LTR MaLR -200 232 1 261 163 82 0 chr20 50752680 50752729 -15915276 - MER58A DNA MER1_type -29 78 26 541 269 122 15 chr20 50752783 50752980 -15915025 - MIR SINE MIR -44 218 1 2420 74 0 7 chr20 50753034 50753333 -15914672 - AluY SINE Alu -14 297 1 936 238 75 8 chr20 50753539 50753779 -15914226 + MER45C DNA AcHobo 4 259 -694 409 237 6 14 chr20 50753833 50754015 -15913990 + MER45C DNA AcHobo 742 953 0 565 203 158 0 chr20 50754024 50754157 -15913848 + MER5A DNA MER1_type 33 186 -3 298 267 47 55 chr20 50754263 50754433 -15913572 + MER5A DNA MER1_type 4 183 -6 270 258 15 0 chr20 50755257 50755323 -15912682 + (TATATG)n Simple_repeat Simple_repeat 4 70 0 207 204 0 0 chr20 50755475 50755524 -15912481 + (TTATA)n Simple_repeat Simple_repeat 1 49 0 610 253 146 0 chr20 50755656 50755814 -15912191 + MER5A DNA MER1_type 3 183 -6 2336 91 0 7 chr20 50755819 50756115 -15911890 + AluSc SINE Alu 3 296 -13 480 228 24 59 chr20 50756303 50756326 -15911679 + MIR SINE MIR 91 113 -149 2008 223 102 45 chr20 50756326 50756887 -15911118 - MLT1E LTR MaLR 0 593 1 480 228 24 59 chr20 50756887 50757042 -15910963 + MIR SINE MIR 113 258 -4 385 330 8 64 chr20 50757140 50757376 -15910629 - MIR SINE MIR -30 232 10 1357 227 59 59 chr20 50757539 50757979 -15910026 + MSTB2 LTR MaLR 1 440 -17 1908 177 20 20 chr20 50758073 50758423 -15909582 + MLT1A1 LTR MaLR 1 350 -15 364 273 36 14 chr20 50758555 50758694 -15909311 + MLT1J LTR MaLR 1 142 -369 259 268 161 27 chr20 50758764 50758876 -15909129 + MLT1K LTR MaLR 78 204 -384 692 309 47 44 chr20 50758893 50759256 -15908749 + MLT1K LTR MaLR 157 520 -68 216 0 0 0 chr20 50759283 50759307 -15908698 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 319 219 61 61 chr20 50759369 50759483 -15908522 + MIR SINE MIR 146 259 -3 439 260 173 34 chr20 50759717 50759925 -15908080 + MIR SINE MIR 14 250 -12 926 313 67 24 chr20 50760235 50760685 -15907320 - L2 LINE L2 -21 3292 2824 3876 92 36 16 chr20 50760836 50761392 -15906613 - L1MA1 LINE L1 0 6302 5736 185 282 69 74 chr20 50761641 50761843 -15906162 + L2 LINE L2 3113 3313 0 330 142 20 147 chr20 50761878 50762075 -15905930 + (CCCA)n Simple_repeat Simple_repeat 3 174 0 204 132 13 176 chr20 50762087 50762246 -15905759 + (CCCA)n Simple_repeat Simple_repeat 3 135 0 306 121 40 147 chr20 50762287 50762485 -15905520 + (CCTA)n Simple_repeat Simple_repeat 2 178 0 253 115 0 193 chr20 50762827 50763045 -15904960 + (CCTA)n Simple_repeat Simple_repeat 2 177 0 207 0 0 0 chr20 50764282 50764305 -15903700 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 549 186 22 208 chr20 50765940 50766171 -15901834 + MER5A DNA MER1_type 2 189 0 1160 211 96 153 chr20 50766200 50766782 -15901223 + MLT1H LTR MaLR 1 549 0 1818 171 7 3 chr20 50766936 50767234 -15900771 - AluJb SINE Alu -13 299 1 854 246 61 74 chr20 50767303 50767706 -15900299 + MLT1I LTR MaLR 17 409 0 1270 158 10 0 chr20 50767764 50767966 -15900039 - MLT1B LTR MaLR 0 390 187 4671 120 36 65 chr20 50768010 50768810 -15899195 + L1PA15 LINE L1 5389 6165 0 1012 192 6 0 chr20 50768836 50769013 -15898992 - MLT1B LTR MaLR -212 178 1 405 0 0 0 chr20 50769647 50769692 -15898313 + (TA)n Simple_repeat Simple_repeat 2 46 0 1296 164 4 48 chr20 50769693 50769786 -15898219 - AluJo SINE Alu -91 221 126 2636 78 59 11 chr20 50769786 50770144 -15897861 - THE1C LTR MaLR 0 375 1 1296 164 4 48 chr20 50770144 50770281 -15897724 - AluJo SINE Alu -186 126 1 328 189 0 0 chr20 50771341 50771394 -15896611 + MER20 DNA MER1_type 3 55 -164 332 183 0 0 chr20 50771425 50771485 -15896520 + MER20 DNA MER1_type 160 219 0 253 241 17 0 chr20 50771808 50771866 -15896139 + Charlie8 DNA MER1_type 1367 1425 -992 992 210 88 10 chr20 50771877 50772082 -15895923 + MER58A DNA MER1_type 4 224 0 1099 226 9 5 chr20 50772570 50772791 -15895214 - MER58A DNA MER1_type 0 224 3 279 0 0 0 chr20 50773484 50773515 -15894490 + (CA)n Simple_repeat Simple_repeat 2 32 0 2297 97 3 6 chr20 50773715 50774026 -15893979 + AluSg SINE Alu 1 310 0 252 328 8 17 chr20 50774224 50774343 -15893662 - L1ME LINE L1 -355 5807 5690 888 201 35 44 chr20 50774428 50774657 -15893348 + MER96B DNA MER1_type? 16 242 -175 25 0 0 0 chr20 50774717 50774742 -15893263 + AT_rich Low_complexity Low_complexity 1 25 0 644 259 90 19 chr20 50774794 50775006 -15892999 + MIR SINE MIR 26 252 -10 504 264 18 48 chr20 50775034 50775201 -15892804 + Charlie8 DNA MER1_type 20 181 -2236 611 153 76 35 chr20 50775285 50775429 -15892576 + MER53 DNA DNA 1 150 -39 283 152 121 0 chr20 50775428 50775494 -15892511 + MER53 DNA DNA 103 176 -13 * 256 187 120 0 chr20 50775437 50775512 -15892493 - MER53 DNA DNA -105 84 1 * 973 162 68 81 chr20 50776115 50776337 -15891668 - MER20 DNA MER1_type 0 219 1 953 48 64 0 chr20 50776385 50776510 -15891495 + MER85 DNA T2_type 2 134 -5 1163 157 23 32 chr20 50776865 50777081 -15890924 + MER20 DNA MER1_type 4 217 -2 435 68 0 0 chr20 50778985 50779044 -15888961 + (TG)n Simple_repeat Simple_repeat 2 60 0 568 244 64 24 chr20 50779421 50779605 -15888400 - MIR SINE MIR -34 228 36 256 316 89 17 chr20 50779669 50779825 -15888180 - MIR SINE MIR -70 192 16 224 167 21 0 chr20 50780751 50780799 -15887206 + GA-rich Low_complexity Low_complexity 2 50 0 30 0 0 0 chr20 50783399 50783429 -15884576 + AT_rich Low_complexity Low_complexity 1 30 0 549 303 140 27 chr20 50783702 50784115 -15883890 - L2 LINE L2 -17 3296 2837 453 296 5 9 chr20 50784182 50784331 -15883674 - MIR SINE MIR -65 143 26 * 1527 289 94 15 chr20 50784325 50785216 -15882789 - L2 LINE L2 -4 3309 2347 373 167 64 13 chr20 50785368 50785446 -15882559 - MLT1H LTR MaLR 0 549 468 230 327 62 18 chr20 50785805 50785918 -15882087 + L2 LINE L2 3123 3240 -32 2009 145 0 3 chr20 50786184 50786480 -15881525 + AluSx SINE Alu 1 295 -17 914 112 0 0 chr20 50786657 50786791 -15881214 + L1PA13 LINE L1 6030 6163 0 213 39 0 0 chr20 50786856 50786882 -15881123 + (A)n Simple_repeat Simple_repeat 1 26 0 725 237 104 73 chr20 50787315 50787602 -15880403 + MER102b DNA MER1_type 33 328 -13 248 295 41 41 chr20 50788663 50788785 -15879220 + L2 LINE L2 3119 3240 -73 1849 206 17 0 chr20 50788800 50789160 -15878845 - L1MB3 LINE L1 -2 6181 5816 2168 139 0 13 chr20 50789161 50789477 -15878528 - AluSx SINE Alu 0 312 1 1538 205 20 0 chr20 50790381 50790678 -15877327 - AluJo SINE Alu -7 305 3 222 208 312 26 chr20 50790859 50790936 -15877069 + MER5A DNA MER1_type 85 183 -6 227 279 0 144 chr20 50790970 50791081 -15876924 - MER5B DNA MER1_type -83 95 1 250 229 174 37 chr20 50791087 50791196 -15876809 + L2 LINE L2 3186 3309 -4 294 256 131 15 chr20 50791221 50791358 -15876647 - LTR16A LTR ERVL -297 153 1 498 279 101 45 chr20 50791366 50791487 -15876518 + MIR SINE MIR 1 114 -148 2113 107 55 73 chr20 50791487 50791869 -15876136 + THE1C LTR MaLR 1 375 0 498 279 101 45 chr20 50791869 50791994 -15876011 + MIR SINE MIR 114 261 -1 32 75 0 0 chr20 50792000 50792067 -15875938 + AT_rich Low_complexity Low_complexity 1 67 0 2253 105 3 7 chr20 50792656 50792986 -15875019 + AluSx SINE Alu 1 312 0 873 283 136 20 chr20 50793069 50793465 -15874540 - MLT1J LTR MaLR 0 511 70 1107 295 48 3 chr20 50793482 50793858 -15874147 + MLT1K LTR MaLR 95 487 -101 1516 172 34 0 chr20 50793967 50794229 -15873776 - MSTB1 LTR MaLR 0 432 162 225 128 51 39 chr20 50794237 50794315 -15873690 + (TA)n Simple_repeat Simple_repeat 1 79 0 367 118 34 73 chr20 50794367 50794545 -15873460 + (TA)n Simple_repeat Simple_repeat 1 171 0 377 258 34 11 chr20 50794670 50794739 -15873266 + MER5A DNA MER1_type 7 77 -112 667 200 30 0 chr20 50794739 50794874 -15873131 - MER5A DNA MER1_type 0 189 51 288 234 31 0 chr20 50794877 50794941 -15873064 - MER5A DNA MER1_type -73 116 51 * 318 222 28 28 chr20 50794936 50795008 -15872997 - MER5A DNA MER1_type -67 122 51 244 239 68 34 chr20 50795010 50795098 -15872907 - MER5A DNA MER1_type -74 115 25 * 253 270 32 0 chr20 50795079 50795142 -15872863 - MER5A DNA MER1_type -74 115 51 * 347 214 29 0 chr20 50795137 50795207 -15872798 - MER5A DNA MER1_type -67 122 51 331 207 23 58 chr20 50795205 50795292 -15872713 - MER5A DNA MER1_type -69 120 37 * 236 241 37 0 chr20 50795322 50795376 -15872629 - MER5A DNA MER1_type -83 106 51 1306 261 14 24 chr20 50795379 50795418 -15872587 - MLT2B3 LTR ERVL 0 554 516 522 0 0 0 chr20 50795418 50795476 -15872529 + (TA)n Simple_repeat Simple_repeat 2 59 0 1306 261 14 24 chr20 50795476 50795807 -15872198 - MLT2B3 LTR ERVL -38 516 188 442 285 0 8 chr20 50795807 50795930 -15872075 + L2 LINE L2 3188 3309 -4 721 250 36 52 chr20 50796097 50796345 -15871660 - MIR SINE MIR -2 260 17 225 0 0 0 chr20 50796730 50796755 -15871250 + (T)n Simple_repeat Simple_repeat 1 25 0 2737 105 8 3 chr20 50796791 50797153 -15870852 + THE1B LTR MaLR 1 364 0 2125 102 3 0 chr20 50798106 50798390 -15869615 + L1PA16 LINE L1 5608 5892 -274 246 335 34 80 chr20 50798407 50798510 -15869495 + L2 LINE L2 476 582 -2732 865 232 119 0 chr20 50798510 50798695 -15869310 - MER63A DNA MER1_type -2 208 2 246 335 34 80 chr20 50798695 50798830 -15869175 + L2 LINE L2 582 703 -2611 1442 275 77 17 chr20 50798831 50799362 -15868643 + MER20B DNA MER1_type 104 666 -117 193 343 116 32 chr20 50799513 50799764 -15868241 + L2 LINE L2 724 995 -2319 325 255 211 6 chr20 50799788 50799949 -15868056 - L1MC/D LINE L1 -2048 5760 5567 359 281 287 12 chr20 50800092 50800653 -15867352 + L2 LINE L2 2548 3281 -32 1342 196 70 11 chr20 50800656 50800942 -15867063 - MER58B DNA MER1_type -26 315 13 505 317 9 45 chr20 50802266 50802487 -15865518 + MIR SINE MIR 34 246 -16 382 282 53 8 chr20 50802677 50802808 -15865197 + L2 LINE L2 3173 3309 -4 378 268 84 22 chr20 50802908 50803087 -15864918 - LTR33 LTR ERVL -8 513 324 1186 240 173 44 chr20 50803195 50803769 -15864236 + MLT2F LTR ERVL 2 649 -14 1372 177 99 19 chr20 50803776 50804098 -15863907 - MLT1A1 LTR MaLR -13 352 5 249 212 30 15 chr20 50804252 50804318 -15863687 - LTR33 LTR ERVL -437 84 18 510 176 40 96 chr20 50805350 50805475 -15862530 - L2 LINE L2 -8 3305 3188 4160 175 60 36 chr20 50805490 50806020 -15861985 - MER21B LTR ERV1 0 863 304 3728 70 29 2 chr20 50806020 50806502 -15861503 - L1PA8 LINE L1 0 6172 5678 4160 175 60 36 chr20 50806502 50806800 -15861205 - MER21B LTR ERV1 -559 304 15 211 302 35 41 chr20 50806856 50807025 -15860980 - L2 LINE L2 -292 3021 2854 2198 103 7 3 chr20 50807095 50807387 -15860618 - AluSx SINE Alu -19 293 1 1583 213 58 73 chr20 50807534 50807998 -15860007 - LTR40a LTR ERVL 0 519 6 216 250 19 0 chr20 50808223 50808275 -15859730 - L2 LINE L2 -9 3304 3252 491 275 42 24 chr20 50808353 50808520 -15859485 + MER5B DNA MER1_type 4 173 -5 223 295 105 0 chr20 50808888 50808983 -15859022 + MIR SINE MIR 11 115 -147 1195 171 18 31 chr20 50808986 50809208 -15858797 + AluJo SINE Alu 1 219 -93 277 313 52 15 chr20 50809212 50809346 -15858659 + MIR SINE MIR 120 258 -4 * 279 274 32 0 chr20 50809341 50809436 -15858569 - MIR SINE MIR -65 197 100 2029 112 31 3 chr20 50810366 50810653 -15857352 - AluSg SINE Alu -15 295 1 458 272 232 34 chr20 50810783 50811162 -15856843 - MLT1L LTR MaLR -8 607 154 305 293 16 32 chr20 50811281 50811404 -15856601 + Charlie8 DNA MER1_type 158 278 -2139 440 273 86 88 chr20 50812287 50812479 -15855526 - L2 LINE L2 -52 3261 3070 980 135 180 11 chr20 50812479 50812657 -15855348 + MER63A DNA MER1_type 3 210 0 440 273 86 88 chr20 50812657 50812755 -15855250 - L2 LINE L2 -243 3070 2973 2413 77 0 7 chr20 50812755 50813052 -15854953 + AluY SINE Alu 1 295 -16 440 273 86 88 chr20 50813052 50813315 -15854690 - L2 LINE L2 -340 2973 2695 336 309 99 43 chr20 50814036 50814269 -15853736 - MIR SINE MIR -10 252 7 549 329 54 14 chr20 50815138 50815360 -15852645 + MIR SINE MIR 21 251 -11 205 214 122 30 chr20 50815514 50815581 -15852424 + MIR SINE MIR 77 150 -58 182 310 0 0 chr20 50815669 50815727 -15852278 + MIR SINE MIR 200 257 -5 24 0 0 0 chr20 50816340 50816364 -15851641 + AT_rich Low_complexity Low_complexity 1 24 0 2279 88 10 3 chr20 50817069 50817366 -15850639 + AluSc SINE Alu 1 299 -10 1537 176 23 98 chr20 50817400 50817787 -15850218 + MLT1A1 LTR MaLR 1 358 -7 500 302 34 67 chr20 50817842 50818290 -15849715 + L2 LINE L2 2754 3265 -48 21 36 0 0 chr20 50818696 50818724 -15849281 + AT_rich Low_complexity Low_complexity 1 28 0 532 278 40 7 chr20 50818880 50819031 -15848974 + MIR SINE MIR 34 189 -73 22 35 0 0 chr20 50819263 50819292 -15848713 + AT_rich Low_complexity Low_complexity 1 29 0 622 158 0 0 chr20 50819340 50819441 -15848564 - AluSx SINE Alu -3 307 207 1147 98 0 0 chr20 50819442 50819585 -15848420 - AluSx SINE Alu -170 143 1 988 120 55 38 chr20 50820369 50820552 -15847453 + MER20 DNA MER1_type 10 195 -24 2188 137 76 15 chr20 50820800 50821143 -15846862 - THE1B LTR MaLR 0 364 1 234 0 0 0 chr20 50822439 50822465 -15845540 + (A)n Simple_repeat Simple_repeat 1 26 0 2071 121 10 7 chr20 50822472 50822770 -15845235 + AluSx SINE Alu 1 299 -13 29 0 0 0 chr20 50823543 50823572 -15844433 + AT_rich Low_complexity Low_complexity 1 29 0 1140 190 43 88 chr20 50823572 50823924 -15844081 + L1MA9 LINE L1 5939 6274 -38 435 104 15 30 chr20 50823973 50824040 -15843965 + MLT1D LTR MaLR 5 70 -435 311 351 71 13 chr20 50824044 50824198 -15843807 + L2 LINE L2 2880 3042 -271 385 161 11 11 chr20 50824730 50824823 -15843182 + GA-rich Low_complexity Low_complexity 2 94 0 1653 139 28 82 chr20 50824956 50825273 -15842732 - AluSx SINE Alu -10 302 3 1912 189 45 3 chr20 50825479 50825812 -15842193 + MER7A DNA MER2_type 2 346 0 323 221 0 9 chr20 50826024 50826137 -15841868 + (ATG)n Simple_repeat Simple_repeat 2 113 0 31 26 0 0 chr20 50826256 50826294 -15841711 + AT_rich Low_complexity Low_complexity 1 38 0 397 206 128 107 chr20 50826827 50827003 -15841002 - L1MC5 LINE L1 -36 7925 7739 2253 85 3 14 chr20 50827003 50827298 -15840707 + AluSq SINE Alu 1 292 -21 397 206 128 107 chr20 50827298 50827402 -15840603 - L1MC5 LINE L1 -222 7739 7639 21 71 0 0 chr20 50827431 50827473 -15840532 + AT_rich Low_complexity Low_complexity 1 42 0 1209 201 19 0 chr20 50827621 50827835 -15840170 - MER58A DNA MER1_type -3 221 4 252 257 36 107 chr20 50828346 50828412 -15839593 - MIR SINE MIR -108 154 102 2180 93 0 42 chr20 50828412 50828723 -15839282 - AluSx SINE Alu -14 298 1 252 257 36 107 chr20 50828723 50828796 -15839209 - MIR SINE MIR -160 102 25 279 332 184 43 chr20 50828953 50829209 -15838796 + L2 LINE L2 2981 3272 0 6088 50 3 26 chr20 50829712 50830488 -15837517 + L1PA7 LINE L1 5429 6154 0 23 0 0 0 chr20 50832607 50832630 -15835375 + AT_rich Low_complexity Low_complexity 1 23 0 787 257 58 25 chr20 50833391 50833632 -15834373 + MIR SINE MIR 13 261 -1 592 211 22 83 chr20 50834074 50834254 -15833751 + MER112 DNA MER1_type 19 187 -73 1248 134 45 5 chr20 50834259 50834461 -15833544 + AluJo SINE Alu 1 210 -102 1564 227 50 0 chr20 50834514 50834836 -15833169 - MER58B DNA MER1_type -3 338 1 2247 84 11 0 chr20 50835063 50835347 -15832658 - AluY SINE Alu -4 307 21 288 0 0 0 chr20 50836111 50836143 -15831862 + (TG)n Simple_repeat Simple_repeat 2 33 0 1932 138 0 7 chr20 50836508 50836790 -15831215 + AluJb SINE Alu 1 280 -32 294 29 0 0 chr20 50836790 50836825 -15831180 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 190 317 146 32 chr20 50837501 50837558 -15830447 + L2 LINE L2 3136 3185 -87 1047 191 155 49 chr20 50837558 50837620 -15830385 + MER58B DNA MER1_type 4 58 -2362 1721 195 0 19 chr20 50837620 50837938 -15830067 - AluJb SINE Alu 0 312 1 1047 191 155 49 chr20 50837938 50838179 -15829826 + MER58B DNA MER1_type 58 339 -2 190 317 146 32 chr20 50838179 50838244 -15829761 + L2 LINE L2 3185 3272 0 218 203 102 17 chr20 50839835 50839894 -15828111 - L2 LINE L2 -520 2794 2731 373 315 0 23 chr20 50840814 50840944 -15827061 + MIR SINE MIR 95 221 -41 22 0 0 0 chr20 50841154 50841176 -15826829 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr20 50841402 50841426 -15826579 + AT_rich Low_complexity Low_complexity 1 24 0 314 293 41 8 chr20 50841432 50841555 -15826450 - LTR16C LTR ERVL -8 483 357 609 254 98 49 chr20 50841699 50841943 -15826062 - MIR SINE MIR 0 262 7 4557 180 25 1 chr20 50842027 50842801 -15825204 + L1MA3 LINE L1 17 808 -6757 * 16103 147 26 6 chr20 50842796 50848322 -15819683 + L1MA3 LINE L1 2080 7724 0 391 338 8 15 chr20 50848333 50848466 -15819539 + MIR SINE MIR 20 151 -111 1018 277 64 32 chr20 50848568 50848972 -15819033 + LTR16C LTR ERVL 73 489 -2 207 364 20 10 chr20 50848974 50849073 -15818932 + MIR SINE MIR 163 262 0 2977 103 0 21 chr20 50849272 50849699 -15818306 + L1PB1 LINE L1 5731 6148 -3 282 128 0 0 chr20 50850034 50850081 -15817924 + L1M LINE L1 5328 5374 -931 1664 166 17 17 chr20 50850207 50850508 -15817497 + AluJo SINE Alu 12 312 0 1780 221 53 8 chr20 50850746 50851144 -15816861 + LTR52 LTR ERVL 3 418 -3 674 266 82 38 chr20 50852417 50852684 -15815321 + LTR16C LTR ERVL 213 491 0 291 261 0 22 chr20 50852775 50852867 -15815138 + L1MC4 LINE L1 6614 6703 -1339 2131 130 3 0 chr20 50852870 50853170 -15814835 - AluSx SINE Alu -11 301 1 238 343 20 10 chr20 50853806 50853905 -15814100 - L2 LINE L2 -176 3096 2997 215 158 40 40 chr20 50854343 50854419 -15813586 + GA-rich Low_complexity Low_complexity 5 80 0 * 909 138 0 17 chr20 50854410 50854591 -15813414 + (GGGA)n Simple_repeat Simple_repeat 1 178 0 627 293 72 31 chr20 50854595 50854885 -15813120 - LTR16B LTR ERVL -152 312 11 883 244 143 30 chr20 50854904 50855364 -15812641 - MER113 DNA MER1_type? -3 518 7 988 333 23 20 chr20 50855881 50856278 -15811727 - MLT1I LTR MaLR 0 409 12 365 221 0 47 chr20 50856628 50856714 -15811291 + L2 LINE L2 3227 3308 -5 4572 125 29 12 chr20 50856747 50857545 -15810460 - L1PA16 LINE L1 -1 6165 5355 1002 247 68 51 chr20 50858029 50858456 -15809549 - L1MD1 LINE L1 -408 6114 5646 13258 129 75 11 chr20 50858456 50860724 -15807281 - Tigger1 DNA MER2_type 0 2418 4 1002 247 68 51 chr20 50860724 50860879 -15807126 - L1MD1 LINE L1 -876 5646 5495 576 228 38 7 chr20 50860873 50861142 -15806863 - L1MD1 LINE L1 -3004 3422 3025 * 2713 154 35 75 chr20 50861146 50861489 -15806516 - L1MC3 LINE L1 -6 7779 7475 2075 149 0 0 chr20 50861489 50861797 -15806208 - AluSx SINE Alu -4 308 1 2713 154 35 75 chr20 50861797 50862134 -15805871 - L1MC3 LINE L1 -310 7475 7126 310 232 50 51 chr20 50862133 50862314 -15805691 - L1MD1 LINE L1 -4749 1679 1477 * 259 306 153 0 chr20 50863005 50863116 -15804889 - MIR SINE MIR 0 262 135 536 268 22 6 chr20 50863421 50863600 -15804405 + MLT1K LTR MaLR 405 586 -2 469 298 144 14 chr20 50863898 50864113 -15803892 + MIR SINE MIR 19 261 -1 335 259 79 0 chr20 50864219 50864358 -15803647 - MER103 DNA DNA -9 157 8 361 226 151 0 chr20 50864569 50864662 -15803343 + MER58A DNA MER1_type 7 113 0 925 206 22 0 chr20 50864666 50864850 -15803155 + MER58A DNA MER1_type 37 224 0 419 295 146 67 chr20 50865619 50865975 -15802030 - L2 LINE L2 0 3313 2930 572 315 88 8 chr20 50867228 50867466 -15800539 + MIR SINE MIR 2 258 -4 434 238 54 75 chr20 50867753 50867900 -15800105 + MIR3 SINE MIR 2 145 -63 399 289 60 20 chr20 50867936 50868085 -15799920 - Charlie8 DNA MER1_type -2146 271 117 623 278 31 26 chr20 50869547 50869738 -15798267 + L2 LINE L2 3119 3310 -3 1041 292 89 29 chr20 50869849 50870308 -15797697 - L2 LINE L2 0 3313 2816 4117 48 21 0 chr20 50870308 50870823 -15797182 + L1PA6 LINE L1 5629 6154 0 1041 292 89 29 chr20 50870823 50870950 -15797055 - L2 LINE L2 -497 2816 2698 670 284 30 45 chr20 50871886 50872150 -15795855 + MLT1L LTR MaLR 19 278 -337 368 315 22 28 chr20 50872183 50872364 -15795641 + MLT1L LTR MaLR 359 538 -77 839 156 81 0 chr20 50872365 50872551 -15795454 - MER58 DNA MER1_type -22 2398 2198 357 310 0 0 chr20 50872590 50872677 -15795328 - MER58 DNA MER1_type -2333 87 1 407 264 69 14 chr20 50872855 50872999 -15795006 - MIR SINE MIR 0 262 111 384 281 88 0 chr20 50874946 50875060 -15792945 - L2 LINE L2 -5 3267 3144 341 267 50 0 chr20 50875831 50875951 -15792054 - L1ME4a LINE L1 -3 6118 5993 1969 136 0 36 chr20 50875960 50876262 -15791743 + AluSg SINE Alu 1 291 -19 284 240 16 66 chr20 50876540 50876661 -15791344 - L1ME4a LINE L1 -1993 5815 5701 1622 170 13 43 chr20 50876851 50877151 -15790854 + AluJo SINE Alu 5 295 -17 200 273 0 0 chr20 50878051 50878106 -15789899 + A-rich Low_complexity Low_complexity 3 57 0 451 308 25 6 chr20 50878771 50878930 -15789075 - MIR SINE MIR 0 262 101 184 309 160 41 chr20 50879305 50879499 -15788506 + L2 LINE L2 2442 2658 -656 347 356 78 53 chr20 50879641 50880001 -15788004 + L2 LINE L2 2871 3239 -33 1176 110 0 0 chr20 50881248 50881403 -15786602 + AluSg/x SINE Alu 127 281 -31 39640 62 2 8 chr20 50881422 50883257 -15784748 + L1PA5 LINE L1 11 1856 -4298 2350 105 0 0 chr20 50883257 50883561 -15784444 - AluY SINE Alu -7 304 1 39640 62 2 8 chr20 50883561 50887910 -15780095 + L1PA5 LINE L1 1856 6154 0 3322 100 30 6 chr20 50887926 50888435 -15779570 + L1MA2 LINE L1 5784 6304 0 22 0 0 0 chr20 50888465 50888487 -15779518 + AT_rich Low_complexity Low_complexity 1 22 0 897 193 35 45 chr20 50889506 50889551 -15778454 - MER20 DNA MER1_type 0 219 175 2574 49 0 0 chr20 50889551 50889855 -15778150 - AluY SINE Alu -7 304 1 897 193 35 45 chr20 50889855 50890011 -15777994 - MER20 DNA MER1_type -44 175 20 2961 198 5 5 chr20 50890011 50890586 -15777419 - L1M1 LINE L1 -6969 596 22 439 265 56 139 chr20 50891278 50891565 -15776440 + L2 LINE L2 3010 3272 0 305 278 67 56 chr20 50892227 50892407 -15775598 - L1ME4a LINE L1 -43 6078 5897 430 55 98 30 chr20 50892434 50892598 -15775407 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 * 585 31 111 0 chr20 50892594 50892756 -15775249 + (TA)n Simple_repeat Simple_repeat 1 180 0 2246 101 3 0 chr20 50892756 50893042 -15774963 - AluSq SINE Alu -26 287 1 275 286 20 14 chr20 50893064 50893211 -15774794 - L1ME4a LINE L1 -159 5962 5815 25 0 0 0 chr20 50893241 50893266 -15774739 + AT_rich Low_complexity Low_complexity 1 25 0 11417 191 66 34 chr20 50893294 50899926 -15768079 - L1MA5A LINE L1 -14 6925 3 290 329 0 43 chr20 50900420 50900560 -15767445 + MIR SINE MIR 57 190 -72 2448 222 14 2 chr20 50900792 50901364 -15766641 - L1MB7 LINE L1 -11 6173 5595 40 37 0 0 chr20 50901364 50901418 -15766587 + AT_rich Low_complexity Low_complexity 1 54 0 5260 114 51 1 chr20 50901427 50902292 -15765713 - L1MA5A LINE L1 -24 6273 5366 327 102 0 0 chr20 50902329 50902378 -15765627 - L1MB7 LINE L1 -587 5579 5531 2145 107 0 3 chr20 50902476 50902765 -15765240 + AluSx SINE Alu 14 301 -11 403 319 84 26 chr20 50902859 50903085 -15764920 - MIR SINE MIR -1 261 23 347 241 128 15 chr20 50903359 50903492 -15764513 + MIR SINE MIR 38 185 -77 1674 170 38 12 chr20 50903569 50903911 -15764094 - MLT1A1 LTR MaLR 0 365 15 887 205 47 6 chr20 50904366 50904537 -15763468 - MER5B DNA MER1_type 0 178 1 3633 222 23 10 chr20 50904596 50905498 -15762507 - MER63C DNA MER1_type -14 916 3 388 200 136 0 chr20 50905581 50905691 -15762314 - LTR33 LTR ERVL -396 125 1 1522 261 156 11 chr20 50905974 50906494 -15761511 - MLT1G1 LTR MaLR 0 595 1 374 162 131 10 chr20 50907282 50907381 -15760624 - L1MC4 LINE L1 -4 8038 7928 500 45 15 0 chr20 50907386 50907453 -15760552 + (TTCC)n Simple_repeat Simple_repeat 3 70 0 2045 126 0 0 chr20 50907456 50907727 -15760278 - AluSx SINE Alu -2 310 40 219 190 51 13 chr20 50907734 50907806 -15760199 + CT-rich Low_complexity Low_complexity 2 79 -4 1736 181 17 0 chr20 50907806 50908099 -15759906 - AluJb SINE Alu -14 298 1 321 174 0 0 chr20 50908112 50908181 -15759824 + (TCTCTG)n Simple_repeat Simple_repeat 2 70 0 979 191 14 18 chr20 50908277 50908497 -15759508 - L1MC4 LINE L1 -144 7898 7680 273 94 31 31 chr20 50908837 50908901 -15759104 + (TAATG)n Simple_repeat Simple_repeat 2 65 0 1192 306 8 5 chr20 50909251 50909636 -15758369 - LTR16C LTR ERVL -32 459 74 2114 82 14 7 chr20 50910561 50910882 -15757123 - AluSx SINE Alu 0 323 1 1894 216 15 30 chr20 50911106 50911508 -15756497 + MSTD LTR MaLR 1 396 0 2289 119 0 0 chr20 50911757 50912067 -15755938 + AluSg SINE Alu 1 310 0 765 138 25 62 chr20 50912567 50912598 -15755407 - L1MA9 LINE L1 0 6312 6281 2053 139 46 46 chr20 50912598 50912971 -15755034 - THE1C LTR MaLR -2 373 1 765 138 25 62 chr20 50912971 50913099 -15754906 - L1MA9 LINE L1 -31 6281 6159 189 196 0 0 chr20 50913172 50913218 -15754787 + (CA)n Simple_repeat Simple_repeat 2 47 0 1939 127 7 3 chr20 50913271 50913576 -15754429 - AluSx SINE Alu 0 306 1 648 182 58 32 chr20 50913634 50913788 -15754217 + L1MC2 LINE L1 6187 6344 0 1307 176 8 0 chr20 50913792 50914030 -15753975 + L1MB5 LINE L1 5547 5786 -388 342 219 14 0 chr20 50914030 50914102 -15753903 + L1MB5 LINE L1 6092 6165 -9 1750 188 37 8 chr20 50914109 50914486 -15753519 + L1MC3 LINE L1 7398 7785 0 1699 212 54 43 chr20 50914755 50915217 -15752788 - MLT1C LTR MaLR 0 467 1 186 254 63 16 chr20 50915221 50915284 -15752721 - MER5C DNA MER1_type -239 85 20 505 274 49 37 chr20 50915319 50915483 -15752522 - MIR SINE MIR -77 185 20 213 368 9 28 chr20 50916139 50916245 -15751760 - L2 LINE L2 -14 3299 3196 251 292 75 37 chr20 50916254 50916415 -15751590 + MLT1H LTR MaLR 2 168 -381 252 223 52 55 chr20 50916576 50916686 -15751319 + MLT1H LTR MaLR 454 547 -2 491 284 54 45 chr20 50916773 50916995 -15751010 - L2 LINE L2 -182 3090 2867 687 203 189 0 chr20 50917098 50917246 -15750759 + MER8 DNA MER2_type 64 239 0 628 282 95 13 chr20 50917610 50917933 -15750072 + LTR16A LTR ERVL 1 371 -79 1011 213 0 0 chr20 50917937 50918119 -15749886 - MLT1B LTR MaLR -4 386 205 2054 182 51 28 chr20 50918119 50918649 -15749356 - MLT2A2 LTR ERVL 0 554 1 616 222 73 43 chr20 50918666 50918867 -15749138 - MLT1B LTR MaLR -180 194 2 234 108 54 0 chr20 50918884 50918921 -15749084 + LTR16A1 LTR ERVL 414 452 -5 2709 189 42 5 chr20 50919010 50919598 -15748407 - L1MD3 LINE L1 -5 7990 7381 187 276 155 35 chr20 50919752 50919868 -15748137 - MIR3 SINE MIR -49 159 30 454 281 58 12 chr20 50920004 50920175 -15747830 - MLT1K LTR MaLR -408 180 2 256 311 0 75 chr20 50920433 50920539 -15747466 - MIR SINE MIR -70 192 95 1263 223 57 36 chr20 50920642 50920978 -15747027 + LTR16C LTR ERVL 149 491 0 1328 273 95 32 chr20 50921012 50921517 -15746488 - MLT1K LTR MaLR -24 564 28 1914 142 0 14 chr20 50921736 50922051 -15745954 - AluJb SINE Alu 0 311 1 1620 180 39 70 chr20 50922373 50922591 -15745414 - MER58D DNA MER1_type -2044 376 174 1067 192 0 0 chr20 50922591 50922758 -15745247 + FAM SINE Alu 2 168 -7 1620 180 39 70 chr20 50922758 50922927 -15745078 - MER58D DNA MER1_type -2246 174 1 739 165 57 57 chr20 50923928 50924086 -15743919 + MER58A DNA MER1_type 1 158 0 384 309 32 111 chr20 50924093 50924462 -15743543 - MLT1J LTR MaLR -62 449 110 2014 162 0 0 chr20 50924514 50924822 -15743183 - AluJo SINE Alu -2 310 3 21 0 0 0 chr20 50925478 50925499 -15742506 + AT_rich Low_complexity Low_complexity 1 21 0 1067 298 68 66 chr20 50925619 50925726 -15742279 - MLT1K LTR MaLR 0 588 483 2104 121 3 3 chr20 50925726 50926016 -15741989 + AluSg SINE Alu 1 290 -20 1067 298 68 66 chr20 50926016 50926486 -15741519 - MLT1K LTR MaLR -105 483 10 574 278 63 43 chr20 50926663 50926918 -15741087 + MLT1L LTR MaLR 38 297 -318 2252 158 40 32 chr20 50928329 50928878 -15739127 + MLT2A2 LTR ERVL 1 554 0 217 227 0 0 chr20 50928929 50928973 -15739032 + MIR SINE MIR 105 148 -114 279 311 32 49 chr20 50928973 50929254 -15738751 + L2 LINE L2 2761 3038 -275 867 280 88 23 chr20 50929278 50929621 -15738384 - LTR16C LTR ERVL -54 437 73 1941 154 0 3 chr20 50929832 50930124 -15737881 - AluJo SINE Alu -10 302 12 367 356 111 9 chr20 50931533 50931758 -15736247 - MIR SINE MIR 0 262 15 296 308 104 11 chr20 50931823 50932005 -15736000 + MIR SINE MIR 61 259 -3 323 279 12 0 chr20 50932538 50932624 -15735381 - L2 LINE L2 -3 3269 3183 701 247 30 0 chr20 50932636 50932802 -15735203 - MER69A DNA AcHobo -1 176 6 903 201 17 0 chr20 50933641 50933815 -15734190 + MER20 DNA MER1_type 32 208 -11 226 295 0 0 chr20 50933856 50933917 -15734088 + (CTAA)n Simple_repeat Simple_repeat 4 64 0 380 278 86 43 chr20 50934137 50934346 -15733659 - MIR SINE MIR -30 232 15 27 49 0 0 chr20 50934413 50934454 -15733551 + AT_rich Low_complexity Low_complexity 1 41 0 25 0 0 0 chr20 50935170 50935195 -15732810 + AT_rich Low_complexity Low_complexity 1 25 0 1034 170 61 28 chr20 50935847 50936059 -15731946 + MER20 DNA MER1_type 1 219 0 3096 235 64 39 chr20 50936091 50936505 -15731500 + MER69B DNA AcHobo 3 405 -2121 2055 104 18 4 chr20 50936505 50936814 -15731191 + AluSx SINE Alu 1 313 0 3096 235 64 39 chr20 50936814 50936928 -15731077 + MER69B DNA AcHobo 405 515 -2011 1432 130 23 0 chr20 50936928 50937143 -15730862 + L1PA13 LINE L1 5942 6161 -2 3096 235 64 39 chr20 50937143 50937691 -15730314 + MER69B DNA AcHobo 515 1200 -26 309 250 38 83 chr20 50937713 50937845 -15730160 + L2 LINE L2 2226 2351 -963 684 235 59 83 chr20 50937880 50937960 -15730045 + MLT1A2 LTR MaLR 90 170 -204 2301 37 4 8 chr20 50937960 50938228 -15729777 + AluY SINE Alu 1 267 -44 684 235 59 83 chr20 50938228 50938436 -15729569 + MLT1A2 LTR MaLR 170 371 -3 815 216 59 10 chr20 50938444 50938616 -15729389 + MLT1D LTR MaLR 24 209 -296 333 0 0 0 chr20 50938616 50938653 -15729352 + (CA)n Simple_repeat Simple_repeat 1 37 0 815 216 59 10 chr20 50938653 50938684 -15729321 + MLT1D LTR MaLR 209 237 -268 480 270 18 18 chr20 50938717 50938880 -15729125 + MLT1D LTR MaLR 305 467 0 476 348 67 0 chr20 50939266 50939430 -15728575 - L2 LINE L2 -275 3038 2864 413 88 0 0 chr20 50939989 50940046 -15727959 - Alu SINE Alu -11 300 244 375 188 0 0 chr20 50940271 50940335 -15727670 - tRNA-Ile-ATT tRNA tRNA -5 72 9 514 330 84 4 chr20 50940932 50941159 -15726846 + MIR SINE MIR 8 252 -10 504 45 0 0 chr20 50941233 50941300 -15726705 + (TC)n Simple_repeat Simple_repeat 2 68 0 441 0 0 0 chr20 50941299 50941348 -15726657 + (TG)n Simple_repeat Simple_repeat 2 50 0 * 795 182 167 26 chr20 50942042 50942234 -15725771 + MER20 DNA MER1_type 1 219 0 807 301 9 0 chr20 50942319 50942538 -15725467 - MIR SINE MIR 0 262 42 305 309 51 38 chr20 50943353 50943559 -15724446 - L1M4 LINE L1 -1890 4256 4045 2011 181 16 19 chr20 50943559 50943714 -15724291 + MLT1A1 LTR MaLR 1 155 -210 1786 166 3 17 chr20 50943714 50944015 -15723990 + AluSx SINE Alu 1 297 -15 2011 181 16 19 chr20 50944015 50944223 -15723782 + MLT1A1 LTR MaLR 155 363 -2 305 309 51 38 chr20 50944223 50944252 -15723753 - L1M4 LINE L1 -2101 4045 4018 24 32 0 0 chr20 50944310 50944341 -15723664 + AT_rich Low_complexity Low_complexity 1 31 0 5153 180 52 24 chr20 50944869 50945198 -15722807 + Tigger6a DNA MER2_type 24 343 -1254 2265 81 3 20 chr20 50945198 50945532 -15722473 + AluSc SINE Alu 1 309 0 5153 180 52 24 chr20 50945532 50946228 -15721777 + Tigger6a DNA MER2_type 343 1077 -6 2225 162 15 22 chr20 50946419 50946820 -15721185 - L1MC1 LINE L1 0 6333 5936 416 296 58 39 chr20 50947048 50947254 -15720751 + Charlie8 DNA MER1_type 33 242 -2175 330 323 0 11 chr20 50948713 50948806 -15719199 - MLT1J LTR MaLR -193 318 227 1044 83 10 36 chr20 50949206 50949459 -15718546 + (TTCC)n Simple_repeat Simple_repeat 1 427 0 1044 70 5 38 chr20 50949459 50949645 -15718360 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 184 119 24 24 chr20 50949743 50949785 -15718220 + CT-rich Low_complexity Low_complexity 4 45 0 1670 182 0 13 chr20 50949811 50950118 -15717887 - AluJb SINE Alu -5 307 5 1926 244 72 55 chr20 50950818 50950926 -15717079 + MLT1E LTR MaLR 2 107 -486 2258 129 51 28 chr20 50950926 50951282 -15716723 + THE1B LTR MaLR 1 364 0 1926 244 72 55 chr20 50951282 50951755 -15716250 + MLT1E LTR MaLR 107 593 0 198 0 0 0 chr20 50951897 50951919 -15716086 + (GA)n Simple_repeat Simple_repeat 1 22 0 623 251 128 16 chr20 50951958 50952145 -15715860 + MLT1K LTR MaLR 334 541 -47 663 103 0 0 chr20 50952985 50953082 -15714923 + (TCCCC)n Simple_repeat Simple_repeat 5 101 0 180 0 0 0 chr20 50953277 50953297 -15714708 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 459 230 48 8 chr20 50953340 50953466 -15714539 + MLT1H LTR MaLR 375 505 -44 250 200 18 18 chr20 50953560 50953615 -15714390 + LTR33A LTR ERVL 469 523 0 425 339 102 0 chr20 50953619 50953805 -15714200 - MIR SINE MIR -56 206 2 2441 70 0 3 chr20 50955835 50956134 -15711871 + AluY SINE Alu 1 298 -13 493 316 129 28 chr20 50958235 50958505 -15709500 + L2 LINE L2 2630 2871 -442 1663 223 116 12 chr20 50958505 50958926 -15709079 - MLT1C LTR MaLR 0 467 3 493 316 129 28 chr20 50958926 50959258 -15708747 + L2 LINE L2 2871 3305 -8 275 228 127 25 chr20 50959361 50959440 -15708565 - L2 LINE L2 -13 3300 3214 273 283 201 25 chr20 50959472 50959631 -15708374 - MIR SINE MIR -12 250 64 274 294 77 47 chr20 50959705 50959875 -15708130 - MIR SINE MIR -76 186 12 294 306 52 45 chr20 50960203 50960337 -15707668 + MLT1K LTR MaLR 14 148 -440 503 332 77 17 chr20 50960358 50960656 -15707349 + MLT1K LTR MaLR 273 588 0 27 0 0 0 chr20 50961247 50961274 -15706731 + AT_rich Low_complexity Low_complexity 1 27 0 228 204 0 0 chr20 50961358 50961407 -15706598 - L1ME4a LINE L1 -112 6009 5961 246 182 55 0 chr20 50961426 50961481 -15706524 - L1MCa LINE L1 -4363 2063 2006 * 377 293 53 25 chr20 50961479 50961643 -15706362 - L1ME4a LINE L1 -448 5673 5527 313 256 0 0 chr20 50961943 50962025 -15705980 - MIR SINE MIR -71 191 110 1368 181 32 16 chr20 50962039 50962151 -15705854 + AluJb SINE Alu 6 115 -197 363 44 0 0 chr20 50962151 50962196 -15705809 + (TAA)n Simple_repeat Simple_repeat 1 45 0 1368 181 32 16 chr20 50962196 50962332 -15705673 + AluJb SINE Alu 115 258 -54 479 229 28 21 chr20 50962601 50962745 -15705260 - Charlie7 DNA MER1_type -18 2594 2450 749 267 11 11 chr20 50962749 50962936 -15705069 - MLT1A2 LTR MaLR -8 366 180 341 216 80 11 chr20 50962931 50963019 -15704986 + MLT1A1 LTR MaLR 79 172 -193 * 2354 102 0 0 chr20 50963044 50963339 -15704666 - AluSq SINE Alu -18 295 1 383 177 0 0 chr20 50963367 50963426 -15704579 - MLT1A2 LTR MaLR -239 126 68 275 50 25 0 chr20 50963426 50963466 -15704539 - MADE1 DNA Mariner 0 80 40 415 40 0 0 chr20 50963526 50963576 -15704429 - MADE1 DNA Mariner -29 51 2 321 242 0 0 chr20 50963576 50963640 -15704365 - MLT1A2 LTR MaLR -306 68 5 241 254 0 28 chr20 50963753 50963824 -15704181 - Charlie7 DNA MER1_type -1882 730 662 2109 115 3 3 chr20 50963825 50964120 -15703885 + AluSx SINE Alu 1 295 -17 2138 101 7 0 chr20 50964123 50964442 -15703563 + AluSc SINE Alu 1 321 0 1022 259 98 73 chr20 50964480 50964956 -15703049 - MLT1G1 LTR MaLR 0 595 101 2392 90 0 0 chr20 50964956 50965255 -15702750 - AluSc SINE Alu -10 299 1 1022 259 98 73 chr20 50965255 50965350 -15702655 - MLT1G1 LTR MaLR -494 101 10 400 248 99 8 chr20 50965371 50965492 -15702513 - L2 LINE L2 -2 3311 3180 1092 254 46 36 chr20 50965506 50965899 -15702106 - Charlie7 DNA MER1_type -1989 623 227 2442 95 21 0 chr20 50965900 50966236 -15701769 - L1P LINE L1 -1967 4179 3837 4036 51 8 8 chr20 50966236 50966722 -15701283 + L1PA7 LINE L1 5666 6154 0 534 239 108 11 chr20 50966746 50966922 -15701083 - Charlie7 DNA MER1_type -2353 259 67 319 249 153 62 chr20 50967590 50967799 -15700206 - MIR SINE MIR -2 260 33 218 108 62 0 chr20 50967835 50967900 -15700105 + (TA)n Simple_repeat Simple_repeat 1 69 0 228 135 52 10 chr20 50967965 50967973 -15700032 + (TA)n Simple_repeat Simple_repeat 1 7 -93 2744 105 8 3 chr20 50967973 50968335 -15699670 + THE1B LTR MaLR 1 364 0 228 135 52 10 chr20 50968335 50968422 -15699583 + (TA)n Simple_repeat Simple_repeat 7 100 0 23 92 0 0 chr20 50968438 50968503 -15699502 + AT_rich Low_complexity Low_complexity 1 65 0 2403 210 52 36 chr20 50968579 50969204 -15698801 + MLT1E3 LTR MaLR 3 624 0 1058 99 12 0 chr20 50969265 50969426 -15698579 + (TTTC)n Simple_repeat Simple_repeat 4 166 0 865 193 146 14 chr20 50969481 50969710 -15698295 + MIR SINE MIR 3 262 0 794 305 178 7 chr20 50970171 50970604 -15697401 + LTR33 LTR ERVL 15 521 0 227 304 0 0 chr20 50971774 50971830 -15696175 - L2 LINE L2 -8 3264 3209 514 279 132 75 chr20 50972017 50972433 -15695572 + MLT1K LTR MaLR 119 558 -30 1712 186 114 52 chr20 50972477 50972846 -15695159 + MLT1C LTR MaLR 1 403 -64 2390 89 0 0 chr20 50972846 50973138 -15694867 - AluSq SINE Alu -17 296 5 1712 186 114 52 chr20 50973138 50973208 -15694797 + MLT1C LTR MaLR 403 467 0 1273 186 14 0 chr20 50973695 50973905 -15694100 - MER20 DNA MER1_type -2 217 5 370 270 16 40 chr20 50973931 50974057 -15693948 - L2 LINE L2 -4 3268 3146 787 272 30 43 chr20 50974195 50974500 -15693505 + MLT1J LTR MaLR 1 301 -210 2278 200 84 2 chr20 50974512 50974977 -15693028 + MLT1D LTR MaLR 3 505 0 381 323 0 23 chr20 50975039 50975172 -15692833 + MLT1J LTR MaLR 361 490 -21 251 231 9 93 chr20 50975177 50975285 -15692720 + MER74B LTR ERVL 1 99 -523 * 862 263 14 0 chr20 50975265 50975478 -15692527 + MER74B LTR ERVL 211 426 -196 503 267 174 40 chr20 50975491 50975845 -15692160 - L2 LINE L2 -246 3067 2668 457 269 68 74 chr20 50976236 50976393 -15691612 + MER46C DNA MER2_type 2 158 -180 276 30 0 0 chr20 50976393 50976426 -15691579 + (TG)n Simple_repeat Simple_repeat 2 34 0 457 269 68 74 chr20 50976426 50976606 -15691399 + MER46C DNA MER2_type 158 337 -1 283 272 97 19 chr20 50976792 50976895 -15691110 + L2 LINE L2 3155 3265 -7 246 330 9 27 chr20 50977442 50977554 -15690451 + L2 LINE L2 2449 2558 -756 409 88 0 73 chr20 50977615 50977683 -15690322 - L1PA16 LINE L1 -10 6156 6094 394 261 33 0 chr20 50977688 50977780 -15690225 - L1ME LINE L1 -554 5616 5522 1624 76 0 0 chr20 50977857 50978054 -15689951 + AluY SINE Alu 1 197 -114 632 178 0 0 chr20 50978738 50978845 -15689160 + L1MB8 LINE L1 5821 5927 -251 4152 79 15 6 chr20 50978852 50979394 -15688611 - L1PB1 LINE L1 0 6151 5605 1886 49 5 0 chr20 50979394 50979606 -15688399 + L1PA4 LINE L1 5928 6152 -3 293 26 26 0 chr20 50979606 50979645 -15688360 - L1PB1 LINE L1 -535 5616 5577 825 320 148 25 chr20 50979790 50980374 -15687631 - L2 LINE L2 -291 3022 2369 199 341 35 0 chr20 50982156 50982241 -15685764 - MIR SINE MIR -85 123 36 818 260 104 43 chr20 50982386 50982801 -15685204 - LTR16A LTR ERVL -3 447 8 234 365 77 6 chr20 50982877 50983033 -15684972 + MIR SINE MIR 20 186 -76 546 325 34 5 chr20 50983513 50983722 -15684283 - MIR SINE MIR -10 252 38 351 266 130 58 chr20 50984217 50984402 -15683603 + MIR SINE MIR 28 231 -31 2641 154 47 0 chr20 50984402 50984811 -15683194 + MSTC LTR MaLR 1 428 0 351 266 130 58 chr20 50984811 50984832 -15683173 + MIR SINE MIR 231 249 -13 1285 273 15 0 chr20 50985618 50985951 -15682054 - LTR16C LTR ERVL 0 491 154 222 299 65 0 chr20 50986097 50986174 -15681831 - L2 LINE L2 -49 3223 3142 697 288 84 0 chr20 50986265 50986480 -15681525 - MIR SINE MIR -24 238 6 1172 152 37 28 chr20 50986484 50986701 -15681304 - MER20 DNA MER1_type 0 219 1 252 0 0 0 chr20 50986913 50986941 -15681064 + (TG)n Simple_repeat Simple_repeat 1 28 0 473 346 56 34 chr20 50987729 50987814 -15680191 + MIR SINE MIR 15 97 -165 2375 188 96 17 chr20 50987814 50988282 -15679723 + MLT1D LTR MaLR 1 505 0 473 346 56 34 chr20 50988282 50988430 -15679575 + MIR SINE MIR 97 253 -9 2614 175 8 19 chr20 50988511 50988980 -15679025 + MLT2C2 LTR ERVL 1 464 0 185 0 40 0 chr20 50989212 50989237 -15678768 + (CAA)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chr20 50990797 50990818 -15677187 + AT_rich Low_complexity Low_complexity 1 21 0 2794 230 83 38 chr20 50990977 50991740 -15676265 - MER21B LTR ERV1 -57 806 23 244 294 98 49 chr20 50992738 50992942 -15675063 + L1ME LINE L1 5301 5514 -607 396 232 158 0 chr20 50993255 50993350 -15674655 - MER81 DNA DNA -3 111 2 1890 195 30 68 chr20 50993396 50993867 -15674138 - MLT1C LTR MaLR 0 467 15 193 229 0 0 chr20 50993979 50994014 -15673991 - L2 LINE L2 -562 2752 2718 1949 208 5 26 chr20 50994361 50994751 -15673254 - MSTD LTR MaLR 0 396 15 2115 123 3 7 chr20 50994751 50995052 -15672953 - AluSx SINE Alu -10 302 3 804 320 104 21 chr20 50995864 50996425 -15671580 - L2 LINE L2 0 3313 2705 1885 122 3 67 chr20 50996425 50996754 -15671251 - AluSx SINE Alu -4 308 1 804 320 104 21 chr20 50996754 50996830 -15671175 - L2 LINE L2 -608 2705 2637 1246 174 58 5 chr20 50997170 50997377 -15670628 + MER20 DNA MER1_type 1 218 -1 2160 119 0 0 chr20 50997513 50997798 -15670207 + AluSx SINE Alu 1 285 -27 763 315 82 45 chr20 50998556 50999266 -15668739 - L2 LINE L2 -2 3311 2567 349 296 74 43 chr20 50999941 51000171 -15667834 - MER102b DNA MER1_type -1 340 104 1904 149 61 6 chr20 51000401 51000730 -15667275 - MLT1A1 LTR MaLR -18 347 1 381 242 42 0 chr20 51001432 51001527 -15666478 - MER5A DNA MER1_type -77 112 14 21 0 0 0 chr20 51001804 51001825 -15666180 + AT_rich Low_complexity Low_complexity 1 21 0 411 291 36 64 chr20 51001842 51002062 -15665943 - MIR SINE MIR -10 252 39 370 212 329 14 chr20 51002662 51002808 -15665197 + MIR SINE MIR 1 192 -70 761 297 0 50 chr20 51003101 51003360 -15664645 - MIR SINE MIR -6 256 11 22 35 0 0 chr20 51003576 51003605 -15664400 + AT_rich Low_complexity Low_complexity 1 29 0 209 313 144 10 chr20 51003993 51004194 -15663811 + L2 LINE L2 1533 1760 -1554 1391 199 41 23 chr20 51004778 51005120 -15662885 - L1MA9 LINE L1 -39 6273 5926 257 279 60 74 chr20 51005392 51005607 -15662398 - HAL1 LINE L1 -1060 1447 1236 525 189 98 8 chr20 51005680 51005802 -15662203 - MLT1D LTR MaLR -366 139 7 439 275 22 33 chr20 51005997 51006179 -15661826 + CT-rich Low_complexity Low_complexity 1 180 0 2108 126 0 0 chr20 51006395 51006689 -15661316 + AluSx SINE Alu 1 294 -18 180 0 0 0 chr20 51007715 51007735 -15660270 + (CAG)n Simple_repeat Simple_repeat 3 22 0 816 310 30 17 chr20 51007797 51008175 -15659830 - LTR16A1 LTR ERVL -6 476 88 35 24 0 0 chr20 51008407 51008449 -15659556 + AT_rich Low_complexity Low_complexity 1 42 0 630 228 44 114 chr20 51008465 51008637 -15659368 - L2 LINE L2 0 3313 3169 2579 151 18 50 chr20 51008637 51009139 -15658866 + MER66B LTR ERV1 1 486 0 630 228 44 114 chr20 51009139 51009264 -15658741 - L2 LINE L2 -144 3169 3037 371 285 146 0 chr20 51010259 51010382 -15657623 + MIR SINE MIR 35 175 -87 4975 194 84 31 chr20 51010382 51011745 -15656260 + Charlie1a DNA MER1_type 21 1455 0 851 285 37 20 chr20 51011854 51012100 -15655905 - MIR SINE MIR 0 262 13 498 196 8 105 chr20 51012440 51012573 -15655432 - MER45A DNA AcHobo 0 178 59 228 111 0 0 chr20 51014437 51014473 -15653532 + (T)n Simple_repeat Simple_repeat 1 36 0 183 80 0 0 chr20 51014527 51014552 -15653453 + (T)n Simple_repeat Simple_repeat 1 25 0 270 276 151 85 chr20 51014730 51015049 -15652956 + L2 LINE L2 2812 3151 -121 221 231 0 0 chr20 51015064 51015103 -15652902 + polypyrimidine Low_complexity Low_complexity 1 39 0 546 336 68 8 chr20 51015188 51015658 -15652347 + LTR33 LTR ERVL 21 518 -3 244 309 48 0 chr20 51015715 51015799 -15652206 + L2 LINE L2 3178 3265 -7 385 311 0 50 chr20 51016496 51016657 -15651348 - MIR SINE MIR -18 244 92 237 33 0 0 chr20 51017331 51017361 -15650644 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 986 200 44 0 chr20 51017628 51017833 -15650172 - MER20 DNA MER1_type -5 214 1 402 323 90 7 chr20 51018127 51018282 -15649723 - MIR SINE MIR -62 200 33 287 280 237 0 chr20 51018644 51018737 -15649268 + L2 LINE L2 3158 3272 0 490 97 0 0 chr20 51018901 51018973 -15649032 + L1MA5A LINE L1 6219 6290 -7 1142 249 31 29 chr20 51019084 51019562 -15648443 - MER113 DNA MER1_type? -42 479 1 272 349 95 7 chr20 51019571 51019772 -15648233 + MIR SINE MIR 33 248 -14 1872 146 0 44 chr20 51021329 51021644 -15646361 + AluJb SINE Alu 5 305 -7 451 253 26 7 chr20 51021833 51021987 -15646018 + L1ME3A LINE L1 5795 5951 -219 363 274 53 67 chr20 51022272 51022557 -15645448 - MER102a DNA MER1_type -11 319 39 683 158 5 158 chr20 51023056 51023278 -15644727 + MER20 DNA MER1_type 31 218 -1 482 249 117 42 chr20 51023893 51024106 -15643899 + MIR SINE MIR 9 237 -25 472 268 42 21 chr20 51024540 51024682 -15643323 + MIR SINE MIR 118 262 0 2237 123 36 22 chr20 51025027 51025386 -15642619 - THE1B LTR MaLR 0 364 1 729 163 82 65 chr20 51025455 51025565 -15642440 - MER5A DNA MER1_type 0 189 73 2280 106 0 0 chr20 51025565 51025866 -15642139 - AluSx SINE Alu -11 301 1 729 163 82 65 chr20 51025866 51025939 -15642066 - MER5A DNA MER1_type -116 73 3 885 202 129 0 chr20 51025949 51026142 -15641863 - MER20 DNA MER1_type 0 219 2 455 321 69 14 chr20 51026142 51026360 -15641645 + MIR SINE MIR 30 259 -3 488 258 72 25 chr20 51027343 51027578 -15640427 - MIR SINE MIR -7 255 6 203 323 21 43 chr20 51027587 51027680 -15640325 - MIR3 SINE MIR -31 177 87 868 296 107 26 chr20 51027963 51028348 -15639657 - L2 LINE L2 0 3313 2898 436 207 69 0 chr20 51028348 51028464 -15639541 - L1M LINE L1 -753 5413 5293 976 51 34 23 chr20 51028464 51028502 -15639503 + (TTC)n Simple_repeat Simple_repeat 1 215 0 976 51 34 23 chr20 51028502 51028677 -15639328 + (TTC)n Simple_repeat Simple_repeat 2 178 0 1822 159 0 21 chr20 51028817 51029107 -15638898 - AluJb SINE Alu -28 284 1 399 222 170 0 chr20 51029114 51029249 -15638756 - L1M4 LINE L1 -910 5236 5079 275 371 46 13 chr20 51029529 51029680 -15638325 + MIR3 SINE MIR 42 197 -11 320 261 0 108 chr20 51029713 51029777 -15638228 - MER96 DNA MER1_type? 0 175 130 2227 84 17 7 chr20 51029777 51030073 -15637932 + AluSc SINE Alu 1 299 -10 320 261 0 108 chr20 51030073 51030138 -15637867 - MER96 DNA MER1_type? -45 130 60 427 196 33 0 chr20 51030328 51030420 -15637585 - MER5A DNA MER1_type -83 106 12 1795 158 50 0 chr20 51030522 51030819 -15637186 - AluSx SINE Alu 0 312 1 921 297 49 61 chr20 51031176 51031485 -15636520 + MLT1K LTR MaLR 3 303 -285 1030 221 15 19 chr20 51031485 51031747 -15636258 - MIR SINE MIR 0 262 2 921 297 49 61 chr20 51031747 51032030 -15635975 + MLT1K LTR MaLR 303 588 0 312 277 0 0 chr20 51032032 51032097 -15635908 + MIR SINE MIR 84 148 -60 388 267 14 55 chr20 51032253 51032399 -15635606 + L2 LINE L2 3164 3303 -10 2341 98 3 0 chr20 51032985 51033280 -15634725 + AluSp SINE Alu 1 296 -17 586 249 42 42 chr20 51033526 51033583 -15634422 + MIR SINE MIR 63 119 -143 225 0 0 0 chr20 51033583 51033608 -15634397 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 586 249 42 42 chr20 51033608 51033715 -15634290 + MIR SINE MIR 118 227 -35 1095 180 18 31 chr20 51033715 51033937 -15634068 + MER20 DNA MER1_type 1 219 0 560 231 16 0 chr20 51033986 51034107 -15633898 + L2 LINE L2 3191 3313 0 267 211 101 18 chr20 51034205 51034314 -15633691 + MLT1J LTR MaLR 287 404 -107 5034 119 20 0 chr20 51034694 51035484 -15632521 + L1PA13 LINE L1 5354 6159 -4 190 333 21 43 chr20 51035628 51035721 -15632284 - L2 LINE L2 -1123 2191 2101 1567 147 14 46 chr20 51035811 51036096 -15631909 - AluJo SINE Alu -17 295 20 255 289 56 0 chr20 51036194 51036284 -15631721 + MIR SINE MIR 160 254 -8 2324 102 0 3 chr20 51036307 51036612 -15631393 + AluSc SINE Alu 1 304 -5 1502 189 96 10 chr20 51036849 51037266 -15630739 + L1MB8 LINE L1 5726 6178 0 2365 70 10 7 chr20 51038256 51038556 -15629449 + AluY SINE Alu 1 301 -10 23 33 0 0 chr20 51039678 51039708 -15628297 + AT_rich Low_complexity Low_complexity 1 30 0 625 196 162 14 chr20 51039747 51039895 -15628110 - MER5A DNA MER1_type 0 189 20 309 100 0 0 chr20 51040223 51040273 -15627732 + (CA)n Simple_repeat Simple_repeat 1 50 0 374 302 29 33 chr20 51040659 51040901 -15627104 + L1ME LINE L1 5572 5812 -309 353 307 62 57 chr20 51041196 51041388 -15626617 + MIR SINE MIR 20 212 -50 23 0 0 0 chr20 51041985 51042008 -15625997 + AT_rich Low_complexity Low_complexity 1 23 0 209 116 0 23 chr20 51042278 51042305 -15625700 + (TGAA)n Simple_repeat Simple_repeat 1 28 -14 2381 102 0 6 chr20 51042305 51042619 -15625386 + AluSx SINE Alu 1 312 0 209 116 0 23 chr20 51042619 51042634 -15625371 + (TGAA)n Simple_repeat Simple_repeat 28 42 0 399 83 0 0 chr20 51042884 51042944 -15625061 + (TA)n Simple_repeat Simple_repeat 2 61 0 363 44 0 0 chr20 51043762 51043807 -15624198 + (TG)n Simple_repeat Simple_repeat 2 46 0 400 70 0 0 chr20 51043933 51043990 -15624015 - MER53 DNA DNA 0 189 133 1359 95 16 16 chr20 51043991 51044180 -15623825 - AluSg/x SINE Alu -17 295 107 368 176 29 103 chr20 51044182 51044241 -15623764 - MER53 DNA DNA -62 127 65 1800 169 14 14 chr20 51044241 51044536 -15623469 + AluJb SINE Alu 1 295 -17 368 176 29 103 chr20 51044536 51044612 -15623393 - MER53 DNA DNA -124 65 2 318 238 25 12 chr20 51045243 51045323 -15622682 - MIR SINE MIR -105 157 77 233 169 17 51 chr20 51045323 51045382 -15622623 - MLT2D LTR ERVL 0 414 358 249 139 0 0 chr20 51045419 51045462 -15622543 + (TG)n Simple_repeat Simple_repeat 1 43 0 633 183 5 102 chr20 51045484 51045670 -15622335 - MLT2D LTR ERVL -17 397 230 276 114 0 100 chr20 51045721 51045763 -15622242 - MLT2D LTR ERVL -2 518 484 492 62 0 0 chr20 51045763 51045827 -15622178 + (TCTA)n Simple_repeat Simple_repeat 1 64 0 276 114 0 100 chr20 51045827 51045854 -15622151 - MLT2D LTR ERVL -36 484 456 275 191 0 11 chr20 51045871 51045960 -15622045 + (TA)n Simple_repeat Simple_repeat 1 88 0 2050 152 10 38 chr20 51045981 51046376 -15621629 - MLT2D LTR ERVL -17 397 14 256 269 75 65 chr20 51046582 51046783 -15621222 - L1ME3A LINE L1 -2 6168 5966 817 157 84 39 chr20 51046790 51046968 -15621037 + MER58A DNA MER1_type 37 222 -2 1150 254 75 63 chr20 51047071 51047828 -15620177 - L1MC5 LINE L1 -434 7527 6762 2552 103 6 0 chr20 51047866 51048224 -15619781 + L1PA15 LINE L1 5794 6153 -12 225 0 0 0 chr20 51048224 51048249 -15619756 + (CA)n Simple_repeat Simple_repeat 1 25 0 333 155 0 0 chr20 51048250 51048308 -15619697 + (TA)n Simple_repeat Simple_repeat 1 58 0 249 122 0 82 chr20 51048308 51048357 -15619648 - MLT1A1 LTR MaLR -320 45 1 238 250 98 83 chr20 51048446 51048974 -15619031 - HAL1b LINE L1 -752 596 61 25 0 0 0 chr20 51048974 51048999 -15619006 + AT_rich Low_complexity Low_complexity 1 25 0 1019 55 0 0 chr20 51049401 51049529 -15618476 - L1PA5 LINE L1 -4 6150 6023 889 204 17 17 chr20 51050155 51050336 -15617669 - MLT1E2 LTR MaLR 0 626 446 385 166 46 113 chr20 51050399 51050550 -15617455 - MLT1E2 LTR MaLR -485 141 1 331 219 62 52 chr20 51050555 51050651 -15617354 - L2 LINE L2 0 3272 3176 568 255 19 32 chr20 51051612 51051769 -15616236 - L2 LINE L2 0 3313 3159 422 332 114 18 chr20 51052163 51052443 -15615562 + L2 LINE L2 3006 3312 -1 234 178 0 22 chr20 51052549 51052594 -15615411 - MIR SINE MIR 0 262 219 339 331 45 32 chr20 51052636 51052793 -15615212 - MIR SINE MIR -15 247 89 759 295 124 62 chr20 51053127 51053642 -15614363 + MLT1K LTR MaLR 18 564 -24 309 236 15 24 chr20 51053689 51053808 -15614197 - MLT1J2 LTR MaLR -7 428 284 272 87 0 22 chr20 51054016 51054062 -15613943 - MLT1J LTR MaLR -362 149 105 377 343 20 0 chr20 51054505 51054604 -15613401 - L2 LINE L2 -9 3263 3163 877 195 17 0 chr20 51055406 51055580 -15612425 + MER58A DNA MER1_type 47 223 -1 2343 83 3 10 chr20 51055979 51056292 -15611713 - AluY SINE Alu 0 311 1 1207 161 25 0 chr20 51056349 51056591 -15611414 - L1MA8 LINE L1 0 6291 6044 456 223 58 22 chr20 51057055 51057194 -15610811 - MIR SINE MIR 0 262 119 821 211 26 82 chr20 51057232 51057464 -15610541 + MER20 DNA MER1_type 1 219 0 399 322 33 28 chr20 51058943 51059123 -15608882 + L2 LINE L2 2619 2799 -515 292 140 0 35 chr20 51059126 51059183 -15608822 - MLT2B2 LTR ERVL 0 520 466 2552 161 26 11 chr20 51059226 51059693 -15608312 - MLT2B2 LTR ERVL -35 480 7 181 403 60 5 chr20 51059705 51059906 -15608099 + L2 LINE L2 2829 3040 -273 343 160 52 3 chr20 51060050 51060156 -15607849 + (TA)n Simple_repeat Simple_repeat 1 100 -266 27 0 0 0 chr20 51060156 51060183 -15607822 + AT_rich Low_complexity Low_complexity 1 27 0 343 160 52 3 chr20 51060183 51060399 -15607606 + (TA)n Simple_repeat Simple_repeat 100 366 0 25 51 0 0 chr20 51060399 51060438 -15607567 + AT_rich Low_complexity Low_complexity 1 39 0 231 235 0 0 chr20 51060472 51060523 -15607482 + (TA)n Simple_repeat Simple_repeat 1 51 0 297 0 0 0 chr20 51061432 51061465 -15606540 + (TG)n Simple_repeat Simple_repeat 1 33 0 247 211 40 53 chr20 51062998 51063074 -15604931 + L2 LINE L2 2982 3056 -257 907 223 87 0 chr20 51063130 51063336 -15604669 - MER58A DNA MER1_type 0 224 1 449 288 62 62 chr20 51065108 51065414 -15602591 + MLT1K LTR MaLR 281 586 -2 3676 159 24 40 chr20 51065762 51066592 -15601413 - pTR5 LTR ERV1 0 2468 1520 853 187 43 55 chr20 51066660 51066917 -15601088 - pTR5 LTR ERV1 -1442 996 743 1927 153 0 10 chr20 51067025 51067320 -15600685 + AluJb SINE Alu 1 292 -20 241 287 118 37 chr20 51067321 51067457 -15600548 - MLT1K LTR MaLR -328 260 114 575 299 72 14 chr20 51067600 51067821 -15600184 - MIR SINE MIR -14 248 15 816 200 60 60 chr20 51067822 51067917 -15600088 + MER58A DNA MER1_type 5 99 -2321 2230 114 13 7 chr20 51067917 51068225 -15599780 - AluSg SINE Alu 0 310 1 816 200 60 60 chr20 51068225 51068344 -15599661 + MER58A DNA MER1_type 98 219 -5 267 237 54 75 chr20 51068562 51068655 -15599350 + LTR67 LTR ERVL 98 188 -369 218 273 102 64 chr20 51069231 51069418 -15598587 - L2 LINE L2 -93 3220 3027 282 29 0 0 chr20 51069623 51069658 -15598347 + (TG)n Simple_repeat Simple_repeat 2 36 0 287 297 55 93 chr20 51070614 51070796 -15597209 + MIR SINE MIR 16 190 -72 618 128 13 34 chr20 51071055 51071204 -15596801 + GA-rich Low_complexity Low_complexity 3 148 0 1264 164 129 27 chr20 51071996 51072252 -15595753 + AluSx SINE Alu 1 282 -30 189 0 0 0 chr20 51072258 51072279 -15595726 + (TC)n Simple_repeat Simple_repeat 2 22 0 * 219 139 0 0 chr20 51072278 51072314 -15595691 + (TA)n Simple_repeat Simple_repeat 1 36 0 452 181 16 20 chr20 51072446 51072555 -15595450 - L1ME3 LINE L1 -4 6162 6046 369 309 56 25 chr20 51072556 51072718 -15595287 + MER58C DNA MER1_type 1 167 -48 2570 154 9 48 chr20 51072983 51073528 -15594477 - L1MB5 LINE L1 -8 6166 5643 2034 122 3 3 chr20 51073676 51073963 -15594042 + AluSg SINE Alu 1 287 -23 183 42 0 0 chr20 51073975 51073999 -15594006 + (CAA)n Simple_repeat Simple_repeat 2 25 0 617 173 167 0 chr20 51074220 51074382 -15593623 - MER53 DNA DNA 0 189 1 1493 160 147 16 chr20 51075856 51076162 -15591843 + MER7A DNA MER2_type 3 346 0 218 32 32 0 chr20 51077378 51077409 -15590596 + (CA)n Simple_repeat Simple_repeat 2 33 0 575 248 23 64 chr20 51077888 51078106 -15589899 - L2 LINE L2 -9 3304 3096 199 205 0 0 chr20 51078120 51078159 -15589846 + L2 LINE L2 3272 3310 -3 601 227 7 40 chr20 51078939 51079089 -15588916 - Charlie8 DNA MER1_type -2233 184 40 995 224 62 55 chr20 51079147 51079567 -15588438 - L1MC5 LINE L1 -387 7574 7152 22 35 0 0 chr20 51079595 51079624 -15588381 + AT_rich Low_complexity Low_complexity 1 29 0 452 246 183 21 chr20 51080001 51080143 -15587862 - MIR SINE MIR -34 228 64 565 310 117 42 chr20 51082164 51082580 -15585425 + L2 LINE L2 2621 3070 -243 228 345 0 25 chr20 51082897 51083016 -15584989 + MLT1H1 LTR MaLR 1 116 -439 242 274 178 48 chr20 51083250 51083396 -15584609 + MLT1H LTR MaLR 367 531 -18 521 281 177 5 chr20 51083713 51083905 -15584100 - MIR SINE MIR 0 262 38 440 291 60 28 chr20 51084188 51084370 -15583635 - MIR SINE MIR -28 234 47 3562 128 6 9 chr20 51084798 51085327 -15582678 + MER1A DNA MER1_type 1 527 0 222 225 0 180 chr20 51085731 51085820 -15582185 + MIR3 SINE MIR 3 75 -133 244 322 0 11 chr20 51085946 51086033 -15581972 + MIR SINE MIR 82 167 -95 785 308 55 22 chr20 51086251 51086703 -15581302 - MLT1J LTR MaLR -44 467 1 252 122 0 0 chr20 51086903 51086944 -15581061 + (TG)n Simple_repeat Simple_repeat 2 42 0 23 0 0 0 chr20 51087893 51087916 -15580089 + AT_rich Low_complexity Low_complexity 1 23 0 989 176 57 24 chr20 51088552 51088762 -15579243 + MER20 DNA MER1_type 3 219 0 693 307 71 13 chr20 51088819 51089044 -15578961 + MIR SINE MIR 23 260 -2 2471 84 0 0 chr20 51089173 51089483 -15578522 + AluY SINE Alu 1 310 -1 571 311 87 16 chr20 51089884 51090250 -15577755 - MLT1J2 LTR MaLR 0 450 59 283 333 49 10 chr20 51091646 51091748 -15576257 + MIR SINE MIR 20 125 -137 34 42 0 0 chr20 51091934 51091982 -15576023 + AT_rich Low_complexity Low_complexity 1 48 0 265 314 112 61 chr20 51092207 51092717 -15575288 + L1MEd LINE L1 255 790 -5329 1701 231 98 28 chr20 51092886 51093356 -15574649 - MLT1F1 LTR MaLR 0 567 55 2709 111 26 19 chr20 51093356 51093781 -15574224 - MSTA LTR MaLR 0 428 1 1701 231 98 28 chr20 51093781 51093838 -15574167 - MLT1F1 LTR MaLR -512 55 3 731 75 19 0 chr20 51093984 51094090 -15573915 + (TATATG)n Simple_repeat Simple_repeat 4 111 0 404 227 100 27 chr20 51094129 51094239 -15573766 - MIR SINE MIR -20 242 125 471 292 9 0 chr20 51094813 51094926 -15573079 - L2 LINE L2 -6 3266 3153 602 260 21 31 chr20 51096502 51096624 -15571381 + MIR SINE MIR 73 194 -68 2353 93 50 19 chr20 51096624 51096988 -15571017 + THE1C LTR MaLR 1 375 0 602 260 21 31 chr20 51096988 51097057 -15570948 + MIR SINE MIR 194 262 0 305 258 11 11 chr20 51098392 51098481 -15569524 - MIR SINE MIR -10 252 164 426 301 93 51 chr20 51098486 51098722 -15569283 + MIR SINE MIR 1 246 -16 576 241 0 0 chr20 51098747 51098855 -15569150 - MIR SINE MIR -109 153 46 428 210 10 0 chr20 51100241 51100341 -15567664 - MER20 DNA MER1_type 0 219 119 208 316 197 35 chr20 51100771 51100963 -15567042 - L2 LINE L2 -93 3220 2984 1014 210 14 14 chr20 51100963 51101182 -15566823 + MER20 DNA MER1_type 1 219 0 208 316 197 35 chr20 51101182 51101217 -15566788 - L2 LINE L2 -329 2984 2956 268 288 14 0 chr20 51101688 51101761 -15566244 + MIR3 SINE MIR 126 199 -9 204 175 25 0 chr20 51102825 51102865 -15565140 + (TA)n Simple_repeat Simple_repeat 2 42 0 349 226 0 43 chr20 51102865 51102958 -15565047 - L1MC4 LINE L1 -1340 6702 6614 260 137 20 0 chr20 51103003 51103054 -15564951 + (TA)n Simple_repeat Simple_repeat 1 52 0 276 261 0 0 chr20 51103146 51103238 -15564767 + (TA)n Simple_repeat Simple_repeat 1 92 0 325 282 56 14 chr20 51103462 51103604 -15564401 - MLT1J LTR MaLR -118 393 246 1379 202 125 109 chr20 51103732 51103944 -15564061 - MLT1E1 LTR MaLR -4 650 443 1664 155 7 37 chr20 51103944 51104240 -15563765 - AluJo SINE Alu -25 287 1 1379 202 125 109 chr20 51104240 51104445 -15563560 - MLT1E1 LTR MaLR -211 443 243 2321 91 7 3 chr20 51104445 51104752 -15563253 - AluSx SINE Alu -4 308 1 1379 202 125 109 chr20 51104752 51104967 -15563038 - MLT1E1 LTR MaLR -411 243 7 183 289 0 0 chr20 51105147 51105199 -15562806 - L2 LINE L2 0 3313 3262 454 280 73 21 chr20 51105201 51105376 -15562629 + MIR SINE MIR 2 180 -63 446 277 178 8 chr20 51106189 51106431 -15561574 - L1MC4 LINE L1 -1827 5981 5699 190 311 115 0 chr20 51106571 51106632 -15561373 - L2 LINE L2 0 3313 3246 392 212 50 0 chr20 51108104 51108203 -15559802 + L1MDa LINE L1 1 104 -6436 507 190 30 27 chr20 51108230 51108774 -15559231 + (TATATG)n Simple_repeat Simple_repeat 1 545 0 1738 257 95 21 chr20 51108784 51109392 -15558613 + L1MDa LINE L1 124 776 -5764 1002 165 89 5 chr20 51109411 51109635 -15558370 + L1MD1 LINE L1 6000 6242 0 184 283 0 19 chr20 51109692 51109745 -15558260 - L2 LINE L2 0 3313 3262 272 293 17 9 chr20 51110983 51111099 -15556906 - MER103 DNA DNA -49 117 1 390 250 85 113 chr20 51111364 51111576 -15556429 - MER102b DNA MER1_type -31 310 105 1497 199 7 17 chr20 51111594 51111757 -15556248 - AluJb SINE Alu -13 299 139 2365 93 6 6 chr20 51111757 51112069 -15555936 - AluSq SINE Alu -1 312 1 1497 199 7 17 chr20 51112069 51112207 -15555798 - AluJb SINE Alu -173 139 1 344 262 24 0 chr20 51112263 51112431 -15555574 + (TA)n Simple_repeat Simple_repeat 2 173 0 22 56 0 0 chr20 51112535 51112571 -15555434 + AT_rich Low_complexity Low_complexity 1 36 0 1653 158 41 10 chr20 51113257 51113372 -15554633 + AluJo SINE Alu 9 119 -193 414 0 0 0 chr20 51113372 51113418 -15554587 + (TAA)n Simple_repeat Simple_repeat 3 48 0 1653 158 41 10 chr20 51113418 51113593 -15554412 + AluJo SINE Alu 119 308 -4 555 216 99 89 chr20 51113618 51113831 -15554174 + MER20 DNA MER1_type 1 215 -4 203 274 0 65 chr20 51114239 51114301 -15553704 - L2 LINE L2 -65 3248 3191 1089 234 5 14 chr20 51114307 51114529 -15553476 - MER58A DNA MER1_type -4 220 1 297 333 34 8 chr20 51114589 51114706 -15553299 + L2 LINE L2 2951 3070 -243 462 219 273 11 chr20 51115020 51115224 -15552781 - MIR SINE MIR -27 235 1 731 313 52 4 chr20 51115907 51116140 -15551865 - MIR SINE MIR -8 254 11 236 356 27 0 chr20 51116151 51116224 -15551781 - MIR3 SINE MIR -45 163 89 1010 166 55 11 chr20 51117758 51117939 -15550066 + MER5A DNA MER1_type 1 189 0 1806 162 10 14 chr20 51218674 51218971 -15449034 - AluJb SINE Alu -16 296 1 257 338 30 46 chr20 51218973 51219067 -15448938 - L1MC5 LINE L1 -178 7783 7689 1108 237 9 0 chr20 51219067 51219282 -15448723 + MER20 DNA MER1_type 3 219 0 257 338 30 46 chr20 51219282 51219489 -15448516 - L1MC5 LINE L1 -272 7689 7487 1193 190 9 18 chr20 51219806 51220027 -15447978 + MER20 DNA MER1_type 1 219 0 264 271 35 0 chr20 51220441 51220526 -15447479 - MER113 DNA MER1_type? -99 422 335 420 250 90 6 chr20 51220538 51220694 -15447311 + MLT1J LTR MaLR 247 415 -96 326 301 10 17 chr20 51221375 51221593 -15446412 + MLT1K LTR MaLR 325 571 -17 432 332 40 15 chr20 51221832 51222034 -15445971 - MIR SINE MIR -9 253 47 443 232 91 37 chr20 51222359 51222668 -15445337 - L2 LINE L2 -277 3036 2710 869 202 42 19 chr20 51222685 51222898 -15445107 + MLT1D LTR MaLR 288 505 0 1675 160 13 39 chr20 51222914 51223226 -15444779 + AluJo SINE Alu 1 304 -8 259 338 0 0 chr20 51223678 51223752 -15444253 + L2 LINE L2 3235 3308 -5 408 229 115 16 chr20 51224427 51224549 -15443456 - MIR SINE MIR -109 153 20 779 313 23 19 chr20 51224821 51225077 -15442928 + MIR SINE MIR 6 262 0 1082 177 27 32 chr20 51225143 51225363 -15442642 - MER20 DNA MER1_type 0 219 1 526 269 13 75 chr20 51225689 51225916 -15442089 + MER102b DNA MER1_type 129 341 0 254 312 124 11 chr20 51226776 51226962 -15441043 + MER113 DNA MER1_type? 3 209 -312 940 271 119 25 chr20 51227134 51227668 -15440337 + L2 LINE L2 2728 3312 -1 238 217 17 0 chr20 51228124 51228184 -15439821 + MLT1L LTR MaLR 217 277 -338 524 283 190 37 chr20 51229335 51229709 -15438296 - L2 LINE L2 0 3313 2883 1298 135 10 0 chr20 51229711 51229904 -15438101 + AluJo SINE Alu 1 195 -117 321 131 49 0 chr20 51229904 51229965 -15438040 + G-rich Low_complexity Low_complexity 4 67 0 401 250 23 12 chr20 51229965 51230137 -15437868 + GA-rich Low_complexity Low_complexity 1 174 0 390 320 33 0 chr20 51230885 51231038 -15436967 + Charlie8 DNA MER1_type 7 164 -2253 310 284 34 0 chr20 51231066 51231154 -15436851 + L1 LINE L1 4737 4827 -1319 280 272 44 44 chr20 51231209 51231345 -15436660 + L1P LINE L1 4901 5036 -1110 253 289 28 14 chr20 51231502 51231644 -15436361 + L1M LINE L1 5256 5399 -2409 954 208 22 40 chr20 51231676 51231902 -15436103 + MER58A DNA MER1_type 1 222 -2 2215 97 7 3 chr20 51231902 51232210 -15435795 + AluSp SINE Alu 1 309 -4 355 246 0 92 chr20 51232217 51232347 -15435658 - L1MC4 LINE L1 -1339 6703 6586 198 318 253 13 chr20 51232413 51232567 -15435438 - MIR SINE MIR -5 257 67 495 230 135 0 chr20 51233188 51233314 -15434691 + MIR SINE MIR 48 190 -72 186 229 0 98 chr20 51233318 51233379 -15434626 + MIR3 SINE MIR 118 172 -36 198 355 0 71 chr20 51233941 51234096 -15433909 - MIR3 SINE MIR -52 156 13 1199 108 0 0 chr20 51234145 51234302 -15433703 + AluSp SINE Alu 137 293 -20 599 165 9 0 chr20 51234306 51234415 -15433590 + MER58A DNA MER1_type 37 146 0 291 266 62 9 chr20 51234514 51234627 -15433378 + L2 LINE L2 2538 2656 -658 230 313 15 0 chr20 51234627 51234694 -15433311 + (CA)n Simple_repeat Simple_repeat 2 69 0 261 265 41 51 chr20 51234694 51234792 -15433213 + L2 LINE L2 3175 3271 -1 * 328 296 146 41 chr20 51234782 51234857 -15433148 - L2 LINE L2 -133 3180 3114 2396 72 0 3 chr20 51234857 51235162 -15432843 + AluY SINE Alu 1 304 -7 328 296 146 41 chr20 51235162 51235353 -15432652 - L2 LINE L2 -199 3114 2886 271 290 0 0 chr20 51235440 51235502 -15432503 + MIR SINE MIR 6 67 -195 665 278 85 5 chr20 51236262 51236485 -15431520 + MIR SINE MIR 22 262 0 313 121 35 17 chr20 51237204 51237262 -15430743 + L2 LINE L2 3193 3251 -62 2443 81 0 0 chr20 51237279 51237589 -15430416 - AluY SINE Alu -1 310 1 510 299 120 49 chr20 51237747 51238115 -15429890 + MLT1J LTR MaLR 114 507 -4 238 333 114 0 chr20 51238125 51238248 -15429757 + MLT1L LTR MaLR 222 358 -257 * 250 263 146 14 chr20 51238243 51238413 -15429592 + MLT1L LTR MaLR 320 615 0 203 308 0 0 chr20 51238442 51238494 -15429511 - L2 LINE L2 -225 3047 2996 207 299 23 0 chr20 51238947 51239034 -15428971 - L2 LINE L2 -299 2973 2885 220 377 18 9 chr20 51239061 51239175 -15428830 + L2 LINE L2 3198 3312 -1 324 281 109 107 chr20 51239933 51240271 -15427734 + L2 LINE L2 2911 3249 -64 228 264 28 14 chr20 51240310 51240382 -15427623 + GA-rich Low_complexity Low_complexity 4 76 0 446 329 55 7 chr20 51240410 51240556 -15427449 + MIR SINE MIR 107 259 -3 321 221 61 99 chr20 51240767 51240898 -15427107 - MIR SINE MIR -21 187 62 371 289 74 0 chr20 51241323 51241444 -15426561 + MIR SINE MIR 8 137 -125 493 204 88 0 chr20 51241617 51241730 -15426275 + MIR SINE MIR 78 200 -62 629 285 146 29 chr20 51241878 51242296 -15425709 + MLT1L LTR MaLR 149 615 0 194 239 87 0 chr20 51242880 51242926 -15425079 + L2 LINE L2 2075 2124 -1190 1102 276 116 31 chr20 51242926 51243794 -15424211 + L2 LINE L2 2344 3298 -15 894 257 45 5 chr20 51244588 51244810 -15423195 - MIR SINE MIR 0 262 32 337 225 25 0 chr20 51245355 51245435 -15422570 + MIR SINE MIR 58 139 -69 258 200 0 0 chr20 51245704 51245754 -15422251 - MER81 DNA DNA -7 107 58 2386 163 24 31 chr20 51245765 51245828 -15422177 + L1MB3 LINE L1 5730 5792 -391 1429 209 71 29 chr20 51245828 51246178 -15421827 + MLT1A1 LTR MaLR 1 365 0 2386 163 24 31 chr20 51246178 51246521 -15421484 + L1MB3 LINE L1 5792 6135 -48 2241 107 0 0 chr20 51246521 51246820 -15421185 + AluSg SINE Alu 1 299 -11 2386 163 24 31 chr20 51246820 51246866 -15421139 + L1MB3 LINE L1 6135 6180 -3 882 185 76 38 chr20 51247303 51247514 -15420491 + MER20 DNA MER1_type 1 219 0 464 264 90 19 chr20 51248226 51248381 -15419624 - MIR SINE MIR 0 262 97 2309 103 0 3 chr20 51248467 51248779 -15419226 + AluSx SINE Alu 1 311 -1 1126 166 5 16 chr20 51248781 51248796 -15419209 + AluJb SINE Alu 121 135 -177 2045 124 14 0 chr20 51248796 51249086 -15418919 + AluSx SINE Alu 1 294 -18 1126 166 5 16 chr20 51249086 51249263 -15418742 + AluJb SINE Alu 135 311 -1 2050 151 39 22 chr20 51249277 51249635 -15418370 + THE1B LTR MaLR 1 364 0 385 303 106 0 chr20 51249657 51249799 -15418206 - L2 LINE L2 -238 3075 2919 * 711 254 35 6 chr20 51249777 51249950 -15418055 - MIR SINE MIR -83 179 2 611 330 0 6 chr20 51249950 51250114 -15417891 - MIR SINE MIR -56 206 44 275 233 17 0 chr20 51250671 51250731 -15417274 - MIR SINE MIR -79 183 123 1254 251 103 30 chr20 51250968 51251731 -15416274 + L2 LINE L2 2494 3312 -1 336 143 0 0 chr20 51252350 51252406 -15415599 + (GGGA)n Simple_repeat Simple_repeat 1 56 0 324 70 0 0 chr20 51252440 51252483 -15415522 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 312 327 6 44 chr20 51252510 51252669 -15415336 + (TGGA)n Simple_repeat Simple_repeat 4 156 0 1337 286 56 25 chr20 51252730 51253326 -15414679 + L2 LINE L2 2704 3312 -1 549 348 45 14 chr20 51254338 51254625 -15413380 - MER102b DNA MER1_type -45 296 1 197 292 0 0 chr20 51254632 51254680 -15413325 - L2 LINE L2 -339 2975 2928 209 309 29 0 chr20 51254911 51254979 -15413026 - L2 LINE L2 -2 3311 3242 202 222 22 0 chr20 51255060 51255105 -15412900 + L2 LINE L2 3136 3181 -91 966 296 90 10 chr20 51255437 51255983 -15412022 + L2 LINE L2 2717 3313 0 605 268 60 0 chr20 51256198 51256381 -15411624 - MIR SINE MIR -40 222 29 1311 135 161 38 chr20 51256409 51256676 -15411329 + AluJo SINE Alu 1 300 -12 454 270 9 0 chr20 51256818 51256929 -15411076 + MIR SINE MIR 80 191 -71 863 278 160 29 chr20 51257735 51258296 -15409709 + L2 LINE L2 1985 2619 -695 689 188 0 7 chr20 51258712 51258856 -15409149 + MLT1B LTR MaLR 240 382 -8 378 185 11 11 chr20 51258894 51258986 -15409019 + LTR33A LTR ERVL 416 507 -16 289 235 78 115 chr20 51258986 51259229 -15408776 - MER112 DNA MER1_type 0 260 27 337 258 183 0 chr20 51259773 51259893 -15408112 - MIR SINE MIR -119 143 2 658 250 21 0 chr20 51260129 51260273 -15407732 - MIR SINE MIR -102 160 14 317 291 63 34 chr20 51260456 51260631 -15407374 + Charlie8 DNA MER1_type 1 180 -2237 661 325 21 35 chr20 51260632 51260971 -15407034 - L2 LINE L2 -710 2604 2271 186 273 73 0 chr20 51260975 51261030 -15406975 + MIR3 SINE MIR 114 172 -36 300 281 34 0 chr20 51261081 51261170 -15406835 - MIR SINE MIR -88 174 83 223 182 73 18 chr20 51261471 51261526 -15406479 + MIR SINE MIR 88 145 -63 340 241 0 0 chr20 51262319 51262402 -15405603 + Charlie4 DNA MER1_type 1879 1961 0 463 311 22 27 chr20 51262477 51262660 -15405345 + L1ME3A LINE L1 5731 5912 -258 1814 163 0 0 chr20 51262672 51262954 -15405051 - AluJo SINE Alu -30 282 1 271 293 207 11 chr20 51263180 51263354 -15404651 + L1ME3A LINE L1 5963 6170 0 263 358 37 0 chr20 51263706 51263815 -15404190 + MIR SINE MIR 80 192 -70 362 21 21 0 chr20 51263949 51263996 -15404009 + (TCCA)n Simple_repeat Simple_repeat 1 48 0 1835 181 16 19 chr20 51264048 51264342 -15403663 + MLT1A1 LTR MaLR 3 296 -69 2121 110 3 17 chr20 51264342 51264356 -15403649 - AluY SINE Alu -15 296 283 183 33 67 0 chr20 51264356 51264386 -15403619 + T-rich Low_complexity Low_complexity 2 180 0 2121 110 3 17 chr20 51264386 51264671 -15403334 - AluY SINE Alu -28 283 1 2262 125 0 0 chr20 51264671 51264976 -15403029 - AluSx SINE Alu -7 305 1 1835 181 16 19 chr20 51264976 51265044 -15402961 + MLT1A1 LTR MaLR 294 365 0 414 260 78 73 chr20 51265124 51265328 -15402677 - L2 LINE L2 -8 3305 3101 283 238 66 25 chr20 51265537 51265659 -15402346 - L2 LINE L2 -526 2788 2662 180 77 0 0 chr20 51265705 51265731 -15402274 + (TG)n Simple_repeat Simple_repeat 2 27 0 206 133 0 44 chr20 51265731 51265776 -15402229 + (CATATA)n Simple_repeat Simple_repeat 4 46 0 1006 203 103 47 chr20 51265776 51266096 -15401909 - L1ME3A LINE L1 0 6170 5833 1173 256 69 15 chr20 51266133 51266539 -15401466 - L1ME3A LINE L1 -454 5708 5281 993 212 5 10 chr20 51266539 51266737 -15401268 - MER58A DNA MER1_type 0 224 28 1716 294 67 5 chr20 51266749 51267363 -15400642 - L1ME3A LINE L1 -870 5276 4617 456 104 0 0 chr20 51267363 51267430 -15400575 + (CATA)n Simple_repeat Simple_repeat 4 70 0 1716 294 67 5 chr20 51267430 51267468 -15400537 - L1ME3A LINE L1 -1529 4617 4583 606 212 222 15 chr20 51267582 51267742 -15400263 + MLT2B1 LTR ERVL 282 492 -28 234 0 0 0 chr20 51267742 51267768 -15400237 + (CA)n Simple_repeat Simple_repeat 2 27 0 606 212 222 15 chr20 51267768 51267805 -15400200 + MLT2B1 LTR ERVL 492 520 0 224 339 43 26 chr20 51267813 51267928 -15400077 - L2 LINE L2 -896 2418 2302 520 276 17 39 chr20 51267946 51268127 -15399878 - MIR SINE MIR -23 239 63 2331 102 0 16 chr20 51268133 51268448 -15399557 - AluSg SINE Alu 0 310 1 402 260 240 7 chr20 51269581 51269735 -15398270 - MIR SINE MIR -19 243 54 202 267 0 0 chr20 51269777 51269822 -15398183 - MIR SINE MIR -55 153 109 303 248 24 48 chr20 51269926 51270051 -15397954 - MIR SINE MIR -71 137 16 231 294 8 25 chr20 51270205 51270324 -15397681 + (TCCA)n Simple_repeat Simple_repeat 1 117 0 261 299 22 22 chr20 51270377 51270511 -15397494 + (TCCA)n Simple_repeat Simple_repeat 1 134 0 249 314 13 19 chr20 51270597 51270753 -15397252 + (TCCA)n Simple_repeat Simple_repeat 3 157 0 238 192 46 146 chr20 51270996 51271054 -15396951 - MIR3 SINE MIR -6 202 162 1337 172 9 64 chr20 51271054 51271397 -15396608 + MER33 DNA MER1_type 1 324 0 238 192 46 146 chr20 51271397 51271468 -15396537 - MIR3 SINE MIR -45 163 86 235 261 58 0 chr20 51271862 51271931 -15396074 - MIR SINE MIR -115 147 75 2149 117 3 16 chr20 51271969 51272278 -15395727 - AluSx SINE Alu -7 305 1 346 308 65 12 chr20 51272299 51272468 -15395537 + L2 LINE L2 3117 3294 -19 2146 105 30 0 chr20 51272699 51272995 -15395010 + AluSx SINE Alu 1 305 -7 371 217 24 0 chr20 51273225 51273308 -15394697 + MLT1J LTR MaLR 80 164 -347 236 292 71 9 chr20 51273401 51273514 -15394491 + MLT1J LTR MaLR 308 427 -84 599 162 86 76 chr20 51274818 51275026 -15392979 - MIR SINE MIR -29 233 6 337 38 0 38 chr20 51275278 51275331 -15392674 + (TTCC)n Simple_repeat Simple_repeat 4 54 0 2191 98 18 0 chr20 51275334 51275620 -15392385 - AluSx SINE Alu -21 291 1 444 293 36 0 chr20 51275822 51275962 -15392043 - MIR SINE MIR -8 254 110 870 295 22 40 chr20 51275985 51276436 -15391569 + Charlie7 DNA MER1_type 275 717 -1895 386 126 35 92 chr20 51276728 51276815 -15391190 + MIR SINE MIR 110 191 -71 326 265 40 49 chr20 51277218 51277412 -15390593 + MLT1L LTR MaLR 121 308 -203 366 290 68 19 chr20 51278520 51278682 -15389323 - MIR SINE MIR -76 186 17 392 261 172 6 chr20 51278783 51278963 -15389042 - Charlie8 DNA MER1_type -2202 215 6 903 279 68 30 chr20 51279263 51279657 -15388348 - L2 LINE L2 -78 3235 2827 330 292 29 0 chr20 51280128 51280251 -15387754 + MIR SINE MIR 1 140 -68 195 100 0 0 chr20 51280255 51280285 -15387720 + (ATG)n Simple_repeat Simple_repeat 3 32 0 336 256 94 0 chr20 51280323 51280440 -15387565 - MIR SINE MIR -96 166 39 262 261 114 0 chr20 51280445 51280533 -15387472 + MIR SINE MIR 163 260 -2 185 263 242 0 chr20 51281031 51281130 -15386875 - L2 LINE L2 0 3272 3150 658 254 104 12 chr20 51281215 51281388 -15386617 - MIR SINE MIR -68 194 6 21 36 0 0 chr20 51281429 51281457 -15386548 + AT_rich Low_complexity Low_complexity 1 28 0 613 293 104 13 chr20 51281481 51281920 -15386085 - L2 LINE L2 -255 3058 2589 701 255 125 10 chr20 51282303 51282503 -15385502 + MER58A DNA MER1_type 1 223 -1 350 261 252 4 chr20 51282510 51282845 -15385160 + MLT1J LTR MaLR 53 502 -9 450 255 130 31 chr20 51282952 51283113 -15384892 - MIR SINE MIR -80 182 6 232 190 17 0 chr20 51283536 51283594 -15384411 + L2 LINE L2 2915 2973 -341 2280 91 0 53 chr20 51283611 51283930 -15384075 + AluSg SINE Alu 4 305 -5 2257 111 0 0 chr20 51283934 51284223 -15383782 + AluSx SINE Alu 1 289 -23 1178 173 13 59 chr20 51284287 51284524 -15383481 + AluJo SINE Alu 71 296 -16 685 90 0 9 chr20 51284534 51284645 -15383360 + L1PA8 LINE L1 6063 6172 0 2438 176 23 39 chr20 51284653 51285470 -15382535 + L1M4 LINE L1 4794 5590 -588 323 252 21 70 chr20 51285471 51285614 -15382391 + MLT1K LTR MaLR 447 582 -6 279 370 103 35 chr20 51285809 51285942 -15382063 + L3 LINE CR1 1115 1237 -340 180 0 0 0 chr20 51285942 51285962 -15382043 + (CTTG)n Simple_repeat Simple_repeat 3 22 0 279 370 103 35 chr20 51285962 51286147 -15381858 + L3 LINE CR1 1237 1455 -122 401 360 89 0 chr20 51286222 51286436 -15381569 + MIR SINE MIR 14 246 -16 863 196 32 21 chr20 51286536 51286725 -15381280 - MIR SINE MIR -2 260 70 755 291 62 13 chr20 51287465 51287771 -15380234 + MLT1K LTR MaLR 181 501 -87 214 200 0 0 chr20 51288262 51288302 -15379703 + A-rich Low_complexity Low_complexity 1 40 0 242 315 0 22 chr20 51288581 51288699 -15379306 + MIR SINE MIR 53 166 -42 585 256 24 82 chr20 51288703 51288910 -15379095 + MER102b DNA MER1_type 144 338 -3 248 128 0 21 chr20 51289077 51289124 -15378881 + (ATGGTG)n Simple_repeat Simple_repeat 4 49 0 464 311 64 15 chr20 51289154 51289545 -15378460 + L1MEc LINE L1 2081 2449 -3766 316 246 141 21 chr20 51289557 51289699 -15378306 - MIR SINE MIR -47 215 57 675 244 47 56 chr20 51289728 51289941 -15378064 - MIR SINE MIR -3 259 49 246 184 103 11 chr20 51290386 51290473 -15377532 + L1MB8 LINE L1 5257 5351 -795 1586 240 44 30 chr20 51290484 51291228 -15376777 + L2 LINE L2 2560 3313 0 320 275 46 9 chr20 51291771 51291880 -15376125 + Charlie8 DNA MER1_type 25 137 -2280 1192 292 147 14 chr20 51291917 51292898 -15375107 - L2 LINE L2 -3 3310 2196 1999 216 14 0 chr20 51292898 51293324 -15374681 + L1MB8 LINE L1 5669 6100 -78 374 285 38 0 chr20 51293333 51293491 -15374514 - L2 LINE L2 -1107 2207 2044 653 305 11 5 chr20 51294911 51295098 -15372907 + MIR SINE MIR 2 189 -73 533 204 63 84 chr20 51295104 51295268 -15372737 - MIR SINE MIR -75 187 26 990 186 14 28 chr20 51295268 51295483 -15372522 - MER58C DNA MER1_type 0 215 4 533 204 63 84 chr20 51295483 51295509 -15372496 - MIR SINE MIR -236 26 1 339 280 43 32 chr20 51295514 51295607 -15372398 - Charlie8 DNA MER1_type -2313 104 11 397 161 36 38 chr20 51296406 51296520 -15371485 + MLT1K LTR MaLR 139 248 -340 458 249 180 37 chr20 51296788 51297033 -15370972 + MLT1K LTR MaLR 282 561 -27 737 217 74 21 chr20 51297325 51297514 -15370491 + MER58A DNA MER1_type 26 224 0 361 273 68 68 chr20 51297530 51297821 -15370184 + L1ME3A LINE L1 5665 5950 -220 192 40 0 0 chr20 51298217 51298242 -15369763 + (TAA)n Simple_repeat Simple_repeat 2 26 0 399 329 12 18 chr20 51298315 51298485 -15369520 - MIR SINE MIR -85 177 9 350 237 133 37 chr20 51298896 51299031 -15368974 - L2 LINE L2 0 3313 3166 202 363 100 6 chr20 51299022 51299182 -15368823 - MIR SINE MIR -10 252 78 * 1063 296 83 30 chr20 51299735 51299840 -15368165 + L2 LINE L2 2092 2190 -1124 2284 117 7 0 chr20 51299840 51300140 -15367865 - AluSx SINE Alu -10 302 1 1063 296 83 30 chr20 51300140 51300541 -15367464 + L2 LINE L2 2190 2625 -689 1304 214 130 20 chr20 51300549 51300956 -15367049 + MLT1C LTR MaLR 8 459 -8 318 203 13 13 chr20 51301009 51301088 -15366917 + L2 LINE L2 2696 2774 -540 668 241 100 12 chr20 51301165 51301177 -15366828 + L1ME3 LINE L1 5891 5901 -261 339 25 0 0 chr20 51301177 51301217 -15366788 + (CA)n Simple_repeat Simple_repeat 1 40 0 668 241 100 12 chr20 51301217 51301453 -15366552 + L1ME3 LINE L1 5901 6161 -1 1813 179 6 10 chr20 51301476 51301788 -15366217 + AluJo SINE Alu 1 311 -1 811 288 119 43 chr20 51301791 51302291 -15365714 + L2 LINE L2 2777 3313 0 296 282 0 69 chr20 51302297 51302428 -15365577 - MIR SINE MIR -112 150 29 1068 299 67 15 chr20 51302775 51303250 -15364755 + Tigger8 DNA MER2_type 138 637 -29 1060 268 129 9 chr20 51303403 51303859 -15364146 + MLT1J LTR MaLR 1 511 0 1409 253 110 41 chr20 51304037 51304454 -15363551 + MLT1K LTR MaLR 63 450 -138 285 29 0 0 chr20 51304454 51304488 -15363517 + (TTG)n Simple_repeat Simple_repeat 2 35 0 1409 253 110 41 chr20 51304488 51304501 -15363504 + MLT1K LTR MaLR 450 461 -127 2154 131 3 16 chr20 51304501 51304815 -15363190 - AluSx SINE Alu -2 310 1 1409 253 110 41 chr20 51304815 51304874 -15363131 + MLT1K LTR MaLR 461 587 -1 1088 188 0 5 chr20 51304980 51305177 -15362828 + MER58A DNA MER1_type 29 224 0 624 241 72 6 chr20 51305640 51305806 -15362199 + MIR SINE MIR 2 178 -84 328 268 88 14 chr20 51306441 51306588 -15361417 - MIR SINE MIR -68 194 32 607 244 28 28 chr20 51306734 51306914 -15361091 + MIR SINE MIR 56 235 -27 563 294 93 14 chr20 51307655 51307869 -15360136 + MIR SINE MIR 32 262 0 261 0 0 0 chr20 51307979 51308008 -15359997 + (A)n Simple_repeat Simple_repeat 1 29 0 228 319 44 26 chr20 51308164 51308277 -15359728 + L2 LINE L2 3194 3308 -5 863 266 106 48 chr20 51308344 51308780 -15359225 + MLT1K LTR MaLR 120 580 -8 519 238 62 12 chr20 51308895 51309055 -15358950 + MER117 DNA MER1_type 1 168 -29 219 320 0 0 chr20 51309570 51309645 -15358360 - MIR3 SINE MIR -41 167 93 693 313 101 12 chr20 51309753 51310059 -15357946 + L2 LINE L2 2700 2977 -336 774 158 47 53 chr20 51310059 51310249 -15357756 - MER53 DNA DNA 0 189 1 693 313 101 12 chr20 51310249 51310485 -15357520 + L2 LINE L2 2977 3298 -15 946 288 4 0 chr20 51310496 51310746 -15357259 + MIR SINE MIR 6 256 -6 532 309 57 20 chr20 51311034 51311280 -15356725 + LTR16A LTR ERVL 16 270 -180 30 45 0 0 chr20 51311464 51311508 -15356497 + AT_rich Low_complexity Low_complexity 1 44 0 538 285 43 11 chr20 51311590 51311776 -15356229 - MER113 DNA MER1_type? -229 292 101 694 118 0 0 chr20 51311776 51311878 -15356127 - AluSg/x SINE Alu -16 294 193 1096 190 0 0 chr20 51312111 51312290 -15355715 - AluJb SINE Alu 0 312 134 690 294 153 24 chr20 51312298 51312802 -15355203 - L2 LINE L2 -48 3265 2687 742 244 115 5 chr20 51313072 51313281 -15354724 - MIR SINE MIR -10 252 21 624 264 13 0 chr20 51313854 51314013 -15353992 - MIR SINE MIR -71 191 31 414 234 144 5 chr20 51314115 51314303 -15353702 + L2 LINE L2 2550 2763 -551 486 227 114 34 chr20 51314372 51314548 -15353457 - MIR SINE MIR -4 258 69 405 0 0 0 chr20 51314754 51314799 -15353206 + (ATG)n Simple_repeat Simple_repeat 3 47 0 1051 194 38 0 chr20 51314826 51315037 -15352968 - MER20 DNA MER1_type 0 219 1 228 241 36 48 chr20 51315078 51315161 -15352844 - MIR SINE MIR -85 177 96 241 221 73 15 chr20 51315396 51315464 -15352541 - MIR3 SINE MIR -129 79 8 430 264 39 8 chr20 51316122 51316251 -15351754 - MIR SINE MIR -44 218 86 597 209 43 91 chr20 51316537 51316724 -15351281 + MER20 DNA MER1_type 1 178 -41 2134 111 3 40 chr20 51316762 51317086 -15350919 - AluSx SINE Alu 0 312 1 1276 265 91 5 chr20 51317096 51317527 -15350478 + L1ME3 LINE L1 5694 6162 0 22 0 0 0 chr20 51317563 51317585 -15350420 + AT_rich Low_complexity Low_complexity 1 22 0 192 77 0 0 chr20 51317649 51317675 -15350330 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 630 0 0 0 chr20 51317705 51317775 -15350230 + (CA)n Simple_repeat Simple_repeat 2 71 0 217 200 22 0 chr20 51317801 51317846 -15350159 + MIR SINE MIR 88 133 -75 259 241 72 0 chr20 51318856 51318939 -15349066 - L2 LINE L2 -25 3288 3200 323 311 118 31 chr20 51318996 51319411 -15348594 - L1MC4a LINE L1 -1596 6212 5762 1707 242 100 38 chr20 51320505 51320531 -15347474 + L2 LINE L2 2185 2208 -1105 872 84 61 0 chr20 51320531 51320662 -15347343 - MER85 DNA T2_type 0 139 1 1707 242 100 38 chr20 51320662 51321446 -15346559 + L2 LINE L2 2208 3050 -263 199 188 208 0 chr20 51321489 51321537 -15346468 - MIR SINE MIR -118 144 87 256 321 88 7 chr20 51321629 51321766 -15346239 + MIR SINE MIR 46 193 -69 * 438 270 10 0 chr20 51321762 51321862 -15346143 + L2 LINE L2 3194 3294 -19 471 262 35 0 chr20 51322739 51322880 -15345125 + L1ME3 LINE L1 5988 6133 -29 1224 253 132 3 chr20 51323215 51323587 -15344418 + LTR16C LTR ERVL 72 491 0 265 292 62 21 chr20 51323898 51323994 -15344011 + MER117 DNA MER1_type 96 195 -2 246 273 39 0 chr20 51324035 51324112 -15343893 - MIR SINE MIR -107 101 22 1117 152 48 9 chr20 51324134 51324344 -15343661 + MER20 DNA MER1_type 1 218 -1 647 263 151 37 chr20 51324425 51324828 -15343177 + L2 LINE L2 2852 3300 -13 530 253 158 16 chr20 51324938 51325128 -15342877 - MIR SINE MIR -5 257 41 495 261 95 40 chr20 51325825 51326081 -15341924 + L1ME4a LINE L1 5748 6029 -92 1402 270 81 25 chr20 51326081 51326563 -15341442 + MLT1J LTR MaLR 1 509 -2 495 261 95 40 chr20 51326563 51326655 -15341350 + L1ME4a LINE L1 6029 6115 -6 651 283 83 43 chr20 51327422 51327529 -15340476 + L2 LINE L2 2904 3005 -308 2806 64 14 0 chr20 51327529 51327888 -15340117 - THE1B LTR MaLR 0 364 1 651 283 83 43 chr20 51327888 51328154 -15339851 + L2 LINE L2 3005 3292 -21 245 304 22 22 chr20 51328295 51328387 -15339618 + MIR SINE MIR 115 206 -56 540 192 47 111 chr20 51328775 51328947 -15339058 - LTR16C LTR ERVL -8 483 323 308 304 89 6 chr20 51329026 51329184 -15338821 - LTR16C LTR ERVL -277 214 44 198 288 0 38 chr20 51329469 51329549 -15338456 - L2 LINE L2 -313 3000 2924 182 316 51 10 chr20 51329589 51329687 -15338318 + L2 LINE L2 3107 3208 -105 540 250 80 21 chr20 51329839 51330027 -15337978 + MIR SINE MIR 2 200 -62 2270 136 0 0 chr20 51330031 51330341 -15337664 + AluSx SINE Alu 1 310 -2 756 249 58 15 chr20 51330375 51330580 -15337425 + MIR SINE MIR 49 262 0 1651 160 17 42 chr20 51330600 51330887 -15337118 + AluJb SINE Alu 15 294 -18 215 279 16 0 chr20 51331490 51331551 -15336454 - L2 LINE L2 -11 3261 3200 920 274 95 31 chr20 51331609 51331966 -15336039 - L2 LINE L2 -10 3303 2924 546 297 35 10 chr20 51332006 51332208 -15335797 + L2 LINE L2 3107 3313 0 499 296 146 8 chr20 51332547 51332787 -15335218 + Charlie8 DNA MER1_type 5 277 -2140 250 264 0 28 chr20 51332849 51332921 -15335084 - MER117 DNA MER1_type -28 169 100 1009 200 28 9 chr20 51333074 51333289 -15334716 - MER20 DNA MER1_type 0 219 1 454 265 91 30 chr20 51333289 51333421 -15334584 + MIR SINE MIR 2 141 -121 680 192 40 68 chr20 51333421 51333461 -15334544 + L1MB8 LINE L1 5990 6030 -148 2351 115 0 0 chr20 51333461 51333766 -15334239 - AluSx SINE Alu -7 305 1 680 192 40 68 chr20 51333766 51333902 -15334103 + L1MB8 LINE L1 6030 6161 -17 207 335 32 38 chr20 51334673 51334831 -15333174 - MIR SINE MIR -46 162 6 2109 165 37 24 chr20 51335073 51335264 -15332741 + MLT1D LTR MaLR 1 188 -317 2013 159 3 0 chr20 51335264 51335573 -15332432 + AluSx SINE Alu 1 310 -2 2109 165 37 24 chr20 51335573 51335835 -15332170 + MLT1D LTR MaLR 188 460 -45 231 283 159 28 chr20 51336321 51336466 -15331539 - MIR SINE MIR -97 165 2 3453 103 4 8 chr20 51336570 51337067 -15330938 + MER1A DNA MER1_type 35 529 0 274 223 16 66 chr20 51337227 51337348 -15330657 + L2 LINE L2 2866 2980 -292 240 277 12 60 chr20 51337614 51337697 -15330308 + MIR SINE MIR 108 186 -76 273 300 0 0 chr20 51337704 51337774 -15330231 + MIR SINE MIR 69 138 -70 337 290 74 33 chr20 51337785 51337935 -15330070 + MIR3 SINE MIR 30 186 -22 458 293 157 43 chr20 51338461 51338857 -15329148 + L2 LINE L2 2863 3303 -10 245 324 37 37 chr20 51338873 51339009 -15328996 + MIR SINE MIR 97 232 -30 1050 265 59 31 chr20 51339009 51339276 -15328729 + L1ME3 LINE L1 5716 5999 -163 2052 100 72 0 chr20 51339276 51339555 -15328450 + AluSx SINE Alu 1 299 -13 1050 265 59 31 chr20 51339555 51339676 -15328329 + L1ME3 LINE L1 5999 6115 -47 1276 251 69 18 chr20 51340309 51340759 -15327246 + L2 LINE L2 2828 3300 -13 262 284 35 85 chr20 51340938 51341079 -15326926 - MER5A DNA MER1_type -18 171 38 2196 123 3 0 chr20 51341192 51341484 -15326521 + AluSx SINE Alu 1 293 -19 299 320 8 35 chr20 51341579 51341751 -15326254 - MER5A DNA MER1_type -3 186 7 324 358 46 25 chr20 51341980 51342220 -15325785 - L1ME LINE L1 -331 5790 5546 1092 170 0 0 chr20 51342252 51342423 -15325582 + AluSp SINE Alu 135 305 -8 229 344 31 0 chr20 51342481 51342577 -15325428 - MIR SINE MIR -6 256 158 2186 106 0 3 chr20 51342675 51343003 -15325002 + AluSx SINE Alu 1 327 0 410 247 107 20 chr20 51343590 51343740 -15324265 + MIR SINE MIR 89 251 -11 2332 122 0 0 chr20 51343748 51344059 -15323946 + AluSx SINE Alu 1 311 -1 181 172 0 0 chr20 51344261 51344290 -15323715 - L2 LINE L2 0 3272 3244 * 1813 236 112 6 chr20 51344281 51344923 -15323082 - L2 LINE L2 -270 3043 2332 231 296 73 34 chr20 51344919 51345098 -15322907 - L2 LINE L2 -97 3175 2990 * 349 310 54 8 chr20 51345222 51345351 -15322654 + MIR SINE MIR 16 150 -112 691 288 130 20 chr20 51345925 51346325 -15321680 - L2 LINE L2 -43 3270 2827 2098 120 57 20 chr20 51346328 51346679 -15321326 + THE1B LTR MaLR 1 364 0 185 225 0 0 chr20 51346906 51346946 -15321059 + MIR SINE MIR 109 148 -114 342 170 140 40 chr20 51347598 51347698 -15320307 - MIR SINE MIR -92 170 61 294 279 0 0 chr20 51348433 51348512 -15319493 + MIR SINE MIR 79 157 -105 563 250 62 92 chr20 51348691 51348963 -15319042 - MER102b DNA MER1_type 0 341 78 3402 222 45 40 chr20 51348964 51349055 -15318950 + L1ME1 LINE L1 4653 4742 -1424 2021 113 10 61 chr20 51349055 51349365 -15318640 + AluSx SINE Alu 1 294 -18 3402 222 45 40 chr20 51349365 51350772 -15317233 + L1ME1 LINE L1 4742 6145 -21 2592 197 131 141 chr20 51350813 51351101 -15316904 + L1MC4a LINE L1 6587 6876 -932 721 139 0 62 chr20 51351101 51351230 -15316775 + FLAM_C SINE Alu 3 123 -20 2592 197 131 141 chr20 51351230 51352168 -15315837 + L1MC4a LINE L1 6876 7808 0 269 285 177 0 chr20 51352421 51352551 -15315454 + MIR SINE MIR 40 192 -70 661 118 59 0 chr20 51352585 51352687 -15315318 - MSTD LTR MaLR -288 108 1 232 220 0 0 chr20 51352688 51352738 -15315267 - MIR SINE MIR -65 143 94 220 308 33 0 chr20 51352790 51352881 -15315124 + MIR SINE MIR 40 133 -75 2087 140 34 11 chr20 51352929 51353285 -15314720 + THE1B LTR MaLR 1 364 0 478 275 6 28 chr20 51353372 51353554 -15314451 - L2 LINE L2 -245 3068 2891 221 302 132 83 chr20 51353561 51353766 -15314239 - L2 LINE L2 -528 2786 2572 * 744 281 30 0 chr20 51353763 51353962 -15314043 + MIR SINE MIR 15 219 -43 824 260 77 0 chr20 51353979 51354279 -15313726 - L2 LINE L2 -734 2580 2258 2383 118 0 0 chr20 51355664 51355977 -15312028 - AluSq SINE Alu 0 313 1 2354 112 0 3 chr20 51357225 51357538 -15310467 + AluSx SINE Alu 1 312 0 372 189 0 0 chr20 51357559 51357633 -15310372 + GA-rich Low_complexity Low_complexity 2 75 0 234 194 16 32 chr20 51357635 51357697 -15310308 + G-rich Low_complexity Low_complexity 2 62 0 186 143 0 0 chr20 51358129 51358164 -15309841 + (A)n Simple_repeat Simple_repeat 1 35 0 234 180 0 0 chr20 51358371 51358421 -15309584 + A-rich Low_complexity Low_complexity 1 50 0 2264 152 28 26 chr20 51359421 51359848 -15308157 + MSTC LTR MaLR 1 428 0 500 262 115 16 chr20 51360149 51360341 -15307664 - MIR SINE MIR -3 259 49 265 242 22 0 chr20 51360570 51360661 -15307344 + (TGGA)n Simple_repeat Simple_repeat 1 93 0 180 195 0 49 chr20 51360717 51360758 -15307247 + MIR SINE MIR 213 251 -11 * 245 122 49 0 chr20 51360727 51360768 -15307237 + L2 LINE L2 3266 3308 -5 755 329 24 0 chr20 51360785 51361034 -15306971 + MIR SINE MIR 3 257 -5 189 0 0 0 chr20 51361913 51361934 -15306071 + (CA)n Simple_repeat Simple_repeat 1 21 0 484 222 193 40 chr20 51362061 51362237 -15305768 - MIR SINE MIR 0 262 60 838 251 27 50 chr20 51362498 51362757 -15305248 + Charlie8 DNA MER1_type 1 253 -2164 229 133 25 12 chr20 51362798 51362890 -15305115 + MIR SINE MIR 106 257 -5 2299 84 21 0 chr20 51362957 51363243 -15304762 + AluSp SINE Alu 1 292 -21 308 280 11 0 chr20 51363245 51363338 -15304667 - MIR SINE MIR -6 256 163 1982 161 102 51 chr20 51363339 51363581 -15304424 + L1MB7 LINE L1 5632 5860 -324 333 0 0 0 chr20 51363581 51363618 -15304387 + (CA)n Simple_repeat Simple_repeat 2 38 0 1982 161 102 51 chr20 51363618 51363687 -15304318 + L1MB7 LINE L1 5860 5924 -260 1926 149 7 0 chr20 51363687 51364005 -15304000 + AluSx SINE Alu 1 320 0 1982 161 102 51 chr20 51364005 51364202 -15303803 + L1MB7 LINE L1 5924 6168 -16 429 153 28 0 chr20 51364217 51364289 -15303716 - MIR SINE MIR -86 176 103 286 302 0 0 chr20 51365030 51365126 -15302879 + GA-rich Low_complexity Low_complexity 2 97 0 215 190 0 20 chr20 51365554 51365641 -15302364 - MIR SINE MIR -5 257 112 192 300 50 20 chr20 51365656 51365756 -15302249 + MIR SINE MIR 160 262 0 328 316 7 43 chr20 51365831 51365970 -15302035 + L2 LINE L2 3140 3273 -40 * 485 250 0 25 chr20 51365964 51366084 -15301921 + MIR SINE MIR 44 160 -102 977 126 68 90 chr20 51366142 51366364 -15301641 + MER20 DNA MER1_type 1 217 -2 334 405 0 6 chr20 51366384 51366542 -15301463 + L1ME3 LINE L1 5733 5889 -281 628 260 121 53 chr20 51366906 51367229 -15300776 + L1MC4a LINE L1 5592 5936 -1872 292 199 17 28 chr20 51367366 51367542 -15300463 + (TA)n Simple_repeat Simple_repeat 1 174 0 867 213 98 24 chr20 51367604 51367858 -15300147 + L1ME3 LINE L1 5888 6160 -2 384 306 153 11 chr20 51369015 51369375 -15298630 + L2 LINE L2 2537 2947 -367 189 255 20 0 chr20 51369374 51369425 -15298580 - MER5A DNA MER1_type -10 179 128 * 2053 108 54 0 chr20 51369666 51369945 -15298060 - AluSx SINE Alu -18 294 1 211 250 47 0 chr20 51370407 51370471 -15297534 - MIR SINE MIR -90 172 106 705 186 28 7 chr20 51370874 51371019 -15296986 - MIR SINE MIR -69 193 46 570 230 9 0 chr20 51371065 51371178 -15296827 + MER81 DNA DNA 1 114 0 222 264 72 72 chr20 51371227 51371397 -15296608 - MIR SINE MIR -1 261 92 926 141 15 0 chr20 51371584 51371719 -15296286 - AluJo SINE Alu -175 137 1 380 285 125 0 chr20 51371767 51371911 -15296094 + MIR SINE MIR 66 227 -35 1089 252 69 63 chr20 51372340 51372456 -15295549 + L2 LINE L2 2538 2652 -661 2371 173 68 2 chr20 51372456 51372885 -15295120 + MSTB2 LTR MaLR 1 457 0 1089 252 69 63 chr20 51372885 51373526 -15294479 + L2 LINE L2 2652 3312 -1 451 176 0 59 chr20 51373728 51373830 -15294175 + MER5A DNA MER1_type 14 109 -80 382 232 32 65 chr20 51374444 51374599 -15293406 + MLT1K LTR MaLR 91 240 -348 487 189 63 84 chr20 51374601 51374744 -15293261 + MLT1K LTR MaLR 449 588 0 205 385 62 8 chr20 51374785 51374915 -15293090 + L2 LINE L2 3136 3272 0 1052 268 165 8 chr20 51374924 51375863 -15292142 - L2 LINE L2 -1 3312 2132 300 320 49 33 chr20 51376533 51376655 -15291350 + MIR SINE MIR 21 141 -67 203 250 0 0 chr20 51376701 51376745 -15291260 - MIR SINE MIR -10 252 209 947 181 8 88 chr20 51376745 51376983 -15291022 - MER20 DNA MER1_type 0 219 1 194 227 0 23 chr20 51376991 51377035 -15290970 + L2 LINE L2 3188 3230 -83 652 318 5 9 chr20 51377231 51377442 -15290563 - MIR SINE MIR 0 262 53 298 270 40 0 chr20 51377505 51377579 -15290426 - L2 LINE L2 -11 3261 3185 184 289 111 33 chr20 51377742 51377832 -15290173 - L2 LINE L2 -250 3063 2967 532 320 37 25 chr20 51378160 51378517 -15289488 - L1MC4a LINE L1 -384 5737 5483 524 286 26 16 chr20 51379014 51379203 -15288802 - MIR SINE MIR -7 255 65 789 238 75 67 chr20 51379254 51379628 -15288377 + L2 LINE L2 2599 2975 -339 203 250 18 0 chr20 51379636 51379692 -15288313 - MIR SINE MIR -150 112 56 289 300 56 50 chr20 51379740 51379900 -15288105 + MIR SINE MIR 80 240 -22 372 132 15 15 chr20 51380255 51380323 -15287682 + MLT1K LTR MaLR 514 581 -7 1002 232 53 92 chr20 51380862 51381064 -15286941 - Charlie8 DNA MER1_type -1899 518 310 1862 168 16 13 chr20 51381064 51381368 -15286637 + AluJo SINE Alu 1 305 -7 2205 135 0 3 chr20 51381368 51381680 -15286325 + AluSx SINE Alu 1 311 -1 1002 232 53 92 chr20 51381680 51381945 -15286060 - Charlie8 DNA MER1_type -2105 312 68 938 135 0 0 chr20 51381945 51382078 -15285927 - AluSq/x SINE Alu -179 133 1 188 357 0 0 chr20 51382199 51382269 -15285736 + L2 LINE L2 3185 3254 -18 288 330 17 17 chr20 51382289 51382468 -15285537 + (CA)n Simple_repeat Simple_repeat 2 180 0 549 257 11 49 chr20 51382662 51382845 -15285160 + MIR3 SINE MIR 27 202 -6 221 233 0 85 chr20 51383011 51383200 -15284805 + (TAAA)n Simple_repeat Simple_repeat 3 175 0 24 32 0 0 chr20 51383305 51383336 -15284669 + AT_rich Low_complexity Low_complexity 1 31 0 573 286 91 5 chr20 51383345 51383544 -15284461 - MIR SINE MIR -4 258 43 235 186 136 0 chr20 51383887 51383946 -15284059 + L2 LINE L2 3238 3304 -9 379 200 114 0 chr20 51383953 51384058 -15283947 - MIR SINE MIR -86 176 60 553 257 48 86 chr20 51384127 51384442 -15283563 + L1MC4 LINE L1 7633 7935 -107 663 323 151 16 chr20 51384963 51385438 -15282567 - L2 LINE L2 0 3313 2773 2671 238 43 21 chr20 51385515 51386265 -15281740 + L1MDa LINE L1 2487 3260 -3280 2246 113 3 22 chr20 51386485 51386803 -15281202 + AluSx SINE Alu 1 312 0 501 203 16 56 chr20 51386995 51387070 -15280935 + MIR SINE MIR 3 79 -129 1247 215 71 130 chr20 51387070 51387730 -15280275 + MLT1E3 LTR MaLR 3 623 -1 501 203 16 56 chr20 51387730 51387816 -15280189 + MIR SINE MIR 79 162 -46 589 245 14 0 chr20 51388272 51388411 -15279594 - MIR SINE MIR -121 141 1 975 231 174 79 chr20 51388571 51388987 -15279018 - L2 LINE L2 -1 3312 2820 558 203 0 8 chr20 51388987 51389105 -15278900 + L1MB7 LINE L1 6049 6165 -19 975 231 174 79 chr20 51389105 51389303 -15278702 - L2 LINE L2 -493 2820 2642 231 309 93 14 chr20 51389319 51389458 -15278547 + MIR SINE MIR 62 211 -51 871 235 63 21 chr20 51389901 51390280 -15277725 + L2 LINE L2 2718 3125 -188 615 278 91 0 chr20 51390289 51390465 -15277540 + MIR SINE MIR 70 261 -1 557 226 17 0 chr20 51390509 51390624 -15277381 + L2 LINE L2 3197 3313 0 652 218 79 6 chr20 51391054 51391219 -15276786 - MIR SINE MIR -71 191 15 1161 145 4 57 chr20 51391383 51391610 -15276395 + MER20 DNA MER1_type 1 215 -4 2240 102 0 7 chr20 51391681 51391974 -15276031 + AluSx SINE Alu 1 291 -21 190 343 0 29 chr20 51392726 51392796 -15275209 + L2 LINE L2 3232 3299 -14 576 276 59 0 chr20 51393096 51393248 -15274757 + MIR SINE MIR 2 162 -100 564 260 34 17 chr20 51394168 51394345 -15273660 - MIR SINE MIR -77 185 6 207 217 0 43 chr20 51394488 51394534 -15273471 + MIR SINE MIR 45 88 -120 667 299 85 0 chr20 51394561 51394762 -15273243 + MIR SINE MIR 2 219 -43 182 278 0 56 chr20 51395168 51395240 -15272765 + L2 LINE L2 2992 3059 -213 658 184 152 32 chr20 51395306 51395523 -15272482 - MIR SINE MIR 0 262 20 237 286 48 0 chr20 51396081 51396144 -15271861 - MIR SINE MIR -60 148 83 478 230 109 124 chr20 51397196 51397337 -15270668 + MIR SINE MIR 2 139 -123 2189 95 3 14 chr20 51397337 51397631 -15270374 + AluSx SINE Alu 1 291 -21 478 230 109 124 chr20 51397631 51397754 -15270251 + MIR SINE MIR 139 262 0 38 89 0 0 chr20 51398500 51398601 -15269404 + GC_rich Low_complexity Low_complexity 1 101 0 21 0 0 0 chr20 51398628 51398649 -15269356 + GC_rich Low_complexity Low_complexity 1 21 0 240 210 24 32 chr20 51398703 51398827 -15269178 + (CGGG)n Simple_repeat Simple_repeat 2 124 0 * 278 172 23 46 chr20 51398745 51398832 -15269173 + G-rich Low_complexity Low_complexity 3 87 0 217 185 37 37 chr20 51399417 51399471 -15268534 + CT-rich Low_complexity Low_complexity 2 55 0 482 308 128 2 chr20 51399679 51399902 -15268103 + MIR SINE MIR 15 262 0 21 0 0 0 chr20 51400387 51400408 -15267597 + AT_rich Low_complexity Low_complexity 1 21 0 248 266 0 0 chr20 51400435 51400499 -15267506 + MIR SINE MIR 81 144 -64 455 293 135 24 chr20 51400537 51400686 -15267319 + MIR SINE MIR 26 206 -56 1040 136 50 59 chr20 51400686 51400845 -15267160 - MER20 DNA MER1_type 0 219 61 1738 179 17 10 chr20 51400845 51401142 -15266863 + AluJo SINE Alu 1 299 -13 1040 136 50 59 chr20 51401142 51401203 -15266802 - MER20 DNA MER1_type -158 61 1 455 293 135 24 chr20 51401203 51401261 -15266744 + MIR SINE MIR 206 256 -6 618 236 81 0 chr20 51401494 51401642 -15266363 + MIR SINE MIR 91 250 -12 717 252 117 8 chr20 51401680 51401946 -15266059 - MLT1L LTR MaLR -9 606 312 191 393 28 28 chr20 51402191 51402298 -15265707 - L2 LINE L2 -27 3286 3180 484 176 110 52 chr20 51402325 51402461 -15265544 - L2 LINE L2 -2 3311 3168 728 280 5 0 chr20 51403756 51403942 -15264063 + MIR SINE MIR 39 225 -37 684 241 96 11 chr20 51403971 51404158 -15263847 + MLT1L LTR MaLR 340 542 -73 2385 105 3 0 chr20 51404198 51404504 -15263501 - AluSx SINE Alu -5 307 1 2287 66 7 27 chr20 51404565 51404866 -15263139 + AluY SINE Alu 1 295 -16 1862 163 3 7 chr20 51405330 51405619 -15262386 - AluJb SINE Alu -20 292 5 198 143 0 0 chr20 51405619 51405654 -15262351 - MIR SINE MIR -13 249 215 1313 85 12 0 chr20 51405654 51405818 -15262187 - AluSq SINE Alu -147 166 1 246 206 0 48 chr20 51405823 51405886 -15262119 - MLT1J LTR MaLR -290 198 101 2228 267 97 26 chr20 51406060 51407186 -15260819 - L2 LINE L2 -40 3273 2064 2139 118 44 0 chr20 51407396 51407693 -15260312 + AluSx SINE Alu 1 310 -2 4523 126 7 1 chr20 51407877 51408594 -15259411 + L1PA13 LINE L1 5435 6155 -8 180 77 0 0 chr20 51408595 51408621 -15259384 + (GA)n Simple_repeat Simple_repeat 1 26 0 594 221 0 57 chr20 51408660 51408818 -15259187 + L1ME3A LINE L1 5814 5962 -208 264 337 36 42 chr20 51408867 51409060 -15258945 + L1ME3A LINE L1 5963 6154 -16 569 271 20 79 chr20 51409062 51409405 -15258600 + L1ME4a LINE L1 5574 5896 -225 389 209 122 71 chr20 51409443 51409509 -15258496 + L1ME4a LINE L1 5902 5963 -158 1889 109 127 0 chr20 51409509 51409784 -15258221 + AluSq SINE Alu 1 310 -3 389 209 122 71 chr20 51409784 51409913 -15258092 + L1ME4a LINE L1 5963 6107 -14 237 269 121 40 chr20 51410220 51410369 -15257636 - L1ME3A LINE L1 -222 5948 5788 816 297 40 20 chr20 51410413 51410763 -15257242 + MLT1J1 LTR MaLR 63 419 -27 2130 149 0 0 chr20 51410770 51411078 -15256927 - AluJb SINE Alu -4 308 1 213 39 0 0 chr20 51411103 51411129 -15256876 + (A)n Simple_repeat Simple_repeat 1 26 0 421 304 158 0 chr20 51411408 51411579 -15256426 + LTR67 LTR ERVL 349 546 -11 821 161 0 8 chr20 51411592 51411722 -15256283 - FRAM SINE Alu -18 158 30 1201 159 68 5 chr20 51411778 51411985 -15256020 - AluJo SINE Alu -92 220 1 956 194 87 0 chr20 51412012 51412218 -15255787 - MER58A DNA MER1_type 0 224 1 243 88 0 0 chr20 51412372 51412406 -15255599 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 445 139 0 0 chr20 51413306 51413378 -15254627 + AluJ/FRAM SINE Alu 221 292 -20 257 316 11 21 chr20 51413378 51413473 -15254532 + L2 LINE L2 1920 2013 -1301 226 273 172 15 chr20 51413478 51413604 -15254401 + MIR SINE MIR 18 156 -62 422 234 14 69 chr20 51413633 51413778 -15254227 + L2 LINE L2 3177 3313 0 504 233 101 0 chr20 51413910 51414039 -15253966 - MLT1K LTR MaLR -1 587 446 291 302 181 28 chr20 51414036 51414244 -15253761 - MLT1K LTR MaLR -294 294 13 * 197 321 42 55 chr20 51414260 51414425 -15253580 + L2 LINE L2 2644 2806 -508 330 253 18 108 chr20 51414555 51414626 -15253379 + L2 LINE L2 1862 1911 -1403 1776 154 35 18 chr20 51414626 51414912 -15253093 + AluJb SINE Alu 1 291 -21 330 253 18 108 chr20 51414912 51415006 -15252999 + L2 LINE L2 1911 2012 -1302 832 243 88 17 chr20 51415175 51415548 -15252457 + MLT1L LTR MaLR 85 519 -96 189 369 51 25 chr20 51415612 51415769 -15252236 + L2 LINE L2 2210 2370 -944 755 286 157 31 chr20 51415865 51416185 -15251820 - L2 LINE L2 0 3313 3035 1933 167 7 0 chr20 51416185 51416484 -15251521 + AluJb SINE Alu 1 301 -11 755 286 157 31 chr20 51416484 51416734 -15251271 - L2 LINE L2 -278 3035 2668 919 221 22 30 chr20 51416752 51416983 -15251022 - MIR SINE MIR -1 261 33 183 42 0 0 chr20 51418128 51418152 -15249853 + (A)n Simple_repeat Simple_repeat 1 24 0 2554 194 116 12 chr20 51418411 51418999 -15249006 - L1ME2 LINE L1 -9 6155 5507 1793 178 0 6 chr20 51419006 51419320 -15248685 - AluJb SINE Alu 0 312 1 1995 104 0 4 chr20 51419523 51419801 -15248204 - AluSx SINE Alu -35 277 1 436 134 0 0 chr20 51419809 51419876 -15248129 + AluJ/FRAM SINE Alu 233 299 -13 276 246 66 49 chr20 51419919 51420041 -15247964 - L1ME4a LINE L1 -71 6050 5927 444 222 268 0 chr20 51420176 51420329 -15247676 + L2 LINE L2 3115 3308 -5 257 329 7 22 chr20 51420329 51420466 -15247539 - L1MC4a LINE L1 -1895 5913 5779 821 203 66 0 chr20 51420663 51420845 -15247160 + MIR SINE MIR 5 198 -64 302 310 46 11 chr20 51421043 51421217 -15246788 - L2 LINE L2 -1245 2069 1890 219 266 43 32 chr20 51421529 51421623 -15246382 + L2 LINE L2 2916 3010 -262 1800 172 20 29 chr20 51421627 51421970 -15246035 + MER58B DNA MER1_type 2 341 0 2007 117 0 0 chr20 51421988 51422308 -15245697 + AluSx SINE Alu 1 320 0 30 27 0 0 chr20 51422542 51422579 -15245426 + AT_rich Low_complexity Low_complexity 1 37 0 235 206 143 0 chr20 51422591 51422654 -15245351 + MIR3 SINE MIR 105 176 -32 249 319 0 0 chr20 51422843 51422915 -15245090 + Charlie8 DNA MER1_type 1346 1417 -1000 385 336 33 0 chr20 51423145 51423267 -15244738 + L1MC4a LINE L1 5524 5649 -2159 388 248 203 20 chr20 51423273 51423426 -15244579 - MER5A DNA MER1_type 0 189 9 666 267 24 35 chr20 51423459 51423714 -15244291 + L1MC4a LINE L1 5675 5926 -1882 30 45 0 0 chr20 51423898 51423942 -15244063 + AT_rich Low_complexity Low_complexity 1 44 0 2094 121 58 25 chr20 51424022 51424385 -15243620 - THE1C LTR MaLR 0 375 1 271 227 30 0 chr20 51424407 51424473 -15243532 + (CA)n Simple_repeat Simple_repeat 2 69 0 202 253 200 0 chr20 51424511 51424586 -15243419 + MIR SINE MIR 22 111 -151 530 336 69 24 chr20 51425166 51425177 -15242828 - MIR SINE MIR 0 262 253 1069 142 0 18 chr20 51425177 51425346 -15242659 + FRAM SINE Alu 1 166 0 530 336 69 24 chr20 51425346 51425581 -15242424 - MIR SINE MIR -9 253 5 371 245 31 101 chr20 51425670 51425829 -15242176 + MIR SINE MIR 77 224 -38 1239 245 75 29 chr20 51426227 51426380 -15241625 - L2 LINE L2 0 3313 3168 1965 105 3 18 chr20 51426380 51426689 -15241316 + AluSx SINE Alu 1 305 0 1239 245 75 29 chr20 51426689 51426910 -15241095 - L2 LINE L2 -145 3168 2921 198 397 23 0 chr20 51427178 51427309 -15240696 - MIR3 SINE MIR -10 198 65 1983 127 10 0 chr20 51427602 51427902 -15240103 - AluSx SINE Alu -9 303 1 243 119 48 0 chr20 51427972 51428014 -15239991 - MIR SINE MIR -60 148 105 779 192 0 0 chr20 51428164 51428294 -15239711 + FRAM SINE Alu 1 130 -46 1427 145 4 25 chr20 51428312 51428553 -15239452 + AluJo SINE Alu 64 299 -13 347 275 56 39 chr20 51428569 51428888 -15239117 - L2 LINE L2 -241 3072 2741 260 200 12 94 chr20 51429579 51429632 -15238373 - MIR SINE MIR 0 262 215 1614 175 0 18 chr20 51429632 51429962 -15238043 - AluJo SINE Alu 0 327 3 260 200 12 94 chr20 51429962 51429991 -15238014 - MIR SINE MIR -47 215 185 251 136 0 68 chr20 51430243 51430302 -15237703 + L1MB3 LINE L1 5445 5499 -835 4100 133 14 21 chr20 51430304 51430499 -15237506 + L1MB3 LINE L1 5482 5677 -506 2247 116 0 0 chr20 51430499 51430810 -15237195 + AluSx SINE Alu 1 311 -1 4100 133 14 21 chr20 51430810 51431319 -15236686 + L1MB3 LINE L1 5677 6181 -2 1857 117 42 3 chr20 51431329 51431612 -15236393 + AluSc SINE Alu 1 294 -15 829 169 0 0 chr20 51431612 51431754 -15236251 + FLAM_C SINE Alu 1 142 -1 402 250 22 11 chr20 51431998 51432090 -15235915 + MIR3 SINE MIR 64 156 -52 2061 129 3 0 chr20 51432691 51433002 -15235003 + AluSx SINE Alu 1 312 0 683 186 31 0 chr20 51433128 51433257 -15234748 - MIR SINE MIR -14 248 116 293 234 107 75 chr20 51433249 51433383 -15234622 + MIR3 SINE MIR 13 150 -67 * 207 0 0 0 chr20 51433554 51433577 -15234428 + (TA)n Simple_repeat Simple_repeat 2 24 0 1748 163 3 23 chr20 51433590 51433891 -15234114 - AluJo SINE Alu -17 295 1 3261 144 22 54 chr20 51433891 51434350 -15233655 - L1MC2 LINE L1 -13 6331 5896 2138 98 24 0 chr20 51434350 51434646 -15233359 - AluSx SINE Alu -9 303 1 3261 144 22 54 chr20 51434646 51434843 -15233162 - L1MC2 LINE L1 -448 5896 5694 225 271 0 0 chr20 51434936 51434984 -15233021 - MIR SINE MIR -61 147 100 471 277 95 7 chr20 51435015 51435163 -15232842 - L2 LINE L2 0 3313 3153 738 318 32 16 chr20 51435172 51435424 -15232581 - MIR SINE MIR 0 262 7 689 308 56 28 chr20 51435882 51436314 -15231691 + L1MC4a LINE L1 5497 5940 -1868 362 275 98 31 chr20 51436381 51436558 -15231447 + MIR SINE MIR 48 247 -15 1386 167 4 12 chr20 51436714 51436960 -15231045 - AluJo SINE Alu -13 299 56 27 29 0 0 chr20 51436993 51437027 -15230978 + AT_rich Low_complexity Low_complexity 1 34 0 320 264 222 14 chr20 51437122 51437266 -15230739 + MER5A DNA MER1_type 16 189 0 1632 179 3 10 chr20 51437408 51437704 -15230301 + AluJb SINE Alu 1 294 -18 427 328 15 0 chr20 51437978 51438112 -15229893 - MIR3 SINE MIR -21 187 52 310 205 167 13 chr20 51438203 51438281 -15229724 + MLT1K LTR MaLR 180 269 -319 810 83 0 255 chr20 51438353 51438589 -15229416 + AluSg/x SINE Alu 128 311 0 261 70 23 0 chr20 51438591 51438634 -15229371 - L1MB2 LINE L1 -7 6164 6121 812 150 0 0 chr20 51438634 51438767 -15229238 - FLAM_C SINE Alu -5 138 6 338 169 0 0 chr20 51438772 51438831 -15229174 - L1MB2 LINE L1 -45 6126 6068 391 268 62 98 chr20 51438834 51439058 -15228947 - Charlie8 DNA MER1_type -2028 389 174 1838 100 0 41 chr20 51439086 51439357 -15228648 - AluSq SINE Alu -18 295 36 364 243 52 104 chr20 51439451 51439636 -15228369 - L1MC4a LINE L1 -1773 6035 5867 1940 149 10 3 chr20 51439636 51439938 -15228067 - AluJo SINE Alu -8 304 1 364 243 52 104 chr20 51439938 51440020 -15227985 - L1MC4a LINE L1 -1941 5867 5782 236 53 26 0 chr20 51440041 51440079 -15227926 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 825 176 0 0 chr20 51440081 51440217 -15227788 - FRAM SINE Alu -31 145 10 480 249 106 73 chr20 51440226 51440299 -15227706 - L1MC4a LINE L1 -2021 5787 5718 3426 99 2 4 chr20 51440299 51440786 -15227219 + L1PA8 LINE L1 5686 6171 -1 480 249 106 73 chr20 51440786 51440985 -15227020 - L1MC4a LINE L1 -2090 5718 5506 2018 137 0 10 chr20 51441429 51441742 -15226263 + AluSx SINE Alu 1 310 -2 480 292 21 14 chr20 51441783 51441927 -15226078 + MIR SINE MIR 31 175 -87 2056 134 0 10 chr20 51442035 51442348 -15225657 + AluSx SINE Alu 1 310 -2 480 292 21 14 chr20 51442389 51442533 -15225472 + MIR SINE MIR 31 175 -87 2519 47 0 0 chr20 51442641 51442939 -15225066 + AluY SINE Alu 1 298 -13 1898 127 0 7 chr20 51443225 51443546 -15224459 + AluSx SINE Alu 1 319 0 276 301 53 15 chr20 51444009 51444142 -15223863 - MLT1I LTR MaLR -267 142 5 2019 105 3 43 chr20 51444190 51444515 -15223490 + AluSq SINE Alu 1 312 -1 846 142 28 0 chr20 51444667 51444808 -15223197 - AluJb SINE Alu -30 282 138 365 326 90 0 chr20 51444865 51445009 -15222996 - MIR SINE MIR -57 205 49 432 0 0 0 chr20 51445136 51445184 -15222821 + (TG)n Simple_repeat Simple_repeat 2 49 0 2060 136 0 0 chr20 51445358 51445668 -15222337 + AluSq SINE Alu 1 310 -3 435 304 50 14 chr20 51445931 51446151 -15221854 - L2 LINE L2 -194 3078 2851 835 288 97 46 chr20 51447681 51447751 -15220254 - MLT1K LTR MaLR -8 580 515 2236 100 3 7 chr20 51447751 51448061 -15219944 + AluSq SINE Alu 1 309 -4 835 288 97 46 chr20 51448061 51448403 -15219602 - MLT1K LTR MaLR -73 515 147 590 179 45 142 chr20 51448469 51448590 -15219415 + L2 LINE L2 2675 2761 -553 2194 105 0 0 chr20 51448590 51448885 -15219120 + AluSx SINE Alu 1 295 -17 590 179 45 142 chr20 51448885 51449009 -15218996 + L2 LINE L2 2761 2896 -418 2123 105 3 0 chr20 51449106 51449401 -15218604 - AluY SINE Alu -15 296 1 1489 287 72 27 chr20 51449402 51449918 -15218087 + MLT1K LTR MaLR 35 573 -15 195 172 35 86 chr20 51449933 51449991 -15218014 + MIR SINE MIR 171 225 -37 1423 254 47 49 chr20 51451056 51451568 -15216437 - MLT1J LTR MaLR 0 511 1 252 0 0 0 chr20 51451745 51451773 -15216232 + (A)n Simple_repeat Simple_repeat 1 28 0 539 184 77 46 chr20 51451861 51452057 -15215948 + L1MC5 LINE L1 7730 7931 -30 4074 179 27 44 chr20 51452211 51452252 -15215753 - L1MB8 LINE L1 -1 6177 6137 2058 125 0 0 chr20 51452252 51452548 -15215457 - AluSg SINE Alu -14 296 1 4074 179 27 44 chr20 51452548 51452985 -15215020 - L1MB8 LINE L1 -41 6137 5694 2563 43 0 0 chr20 51452985 51453290 -15214715 + AluY SINE Alu 2 306 -5 4074 179 27 44 chr20 51453290 51453695 -15214310 - L1MB8 LINE L1 -484 5694 5307 2005 116 7 13 chr20 51453695 51453997 -15214008 - AluSx SINE Alu -12 300 1 4074 179 27 44 chr20 51453997 51454011 -15213994 - L1MB8 LINE L1 -871 5307 5294 4966 212 52 14 chr20 51454029 51454622 -15213383 + L1M4 LINE L1 3999 4568 -1578 2272 70 7 3 chr20 51454622 51454921 -15213084 + AluY SINE Alu 1 300 -11 4966 212 52 14 chr20 51454921 51455593 -15212412 + L1M4 LINE L1 4568 5312 -834 601 143 0 41 chr20 51455594 51455692 -15212313 + AluS SINE Alu 2 95 -217 821 187 29 23 chr20 51455734 51455905 -15212100 + MIR SINE MIR 36 207 -55 372 257 40 30 chr20 51455985 51456086 -15211919 + L2 LINE L2 3212 3313 0 5061 127 23 46 chr20 51456157 51457023 -15210982 + L1MC1 LINE L1 5484 6329 -4 850 267 24 12 chr20 51457436 51457683 -15210322 - MIR SINE MIR -10 252 3 342 258 57 129 chr20 51457717 51457926 -15210079 - MIR SINE MIR -50 212 19 * 569 286 179 0 chr20 51457870 51458038 -15209967 + MIR SINE MIR 15 212 -50 1442 132 0 141 chr20 51458054 51458414 -15209591 + AluSx SINE Alu 1 313 0 2087 78 0 14 chr20 51458429 51458748 -15209257 + AluY SINE Alu 2 316 0 2677 68 17 6 chr20 51458792 51459143 -15208862 - THE1A LTR MaLR 0 355 1 1798 106 40 7 chr20 51459145 51459419 -15208586 + AluSx SINE Alu 23 305 -7 1000 187 0 0 chr20 51459419 51459590 -15208415 + AluSg/x SINE Alu 134 304 -8 657 154 125 7 chr20 51459593 51459729 -15208276 - MER96B DNA MER1_type? -265 152 1 565 302 124 10 chr20 51459850 51460396 -15207609 + L1MC/D LINE L1 5172 5801 -558 814 283 84 44 chr20 51460838 51461266 -15206739 - HERV16 LTR ERVL -3814 1182 738 200 211 35 18 chr20 51461283 51461340 -15206665 + L3 LINE CR1 1436 1493 -84 596 322 5 5 chr20 51461344 51461543 -15206462 + MIR SINE MIR 27 225 -37 2161 113 7 0 chr20 51461613 51461917 -15206088 + AluSx SINE Alu 1 785 0 1085 126 3 20 chr20 51461917 51462396 -15205609 + (GAA)n Simple_repeat Simple_repeat 3 358 0 1057 170 5 62 chr20 51462694 51462918 -15205087 - MER20 DNA MER1_type -6 213 3 190 179 0 89 chr20 51462945 51463001 -15205004 + MIR SINE MIR 135 185 -77 474 18 0 0 chr20 51463001 51463056 -15204949 + (TTCC)n Simple_repeat Simple_repeat 1 55 0 1705 174 0 13 chr20 51463056 51463367 -15204638 - AluJo SINE Alu -5 307 1 279 323 31 8 chr20 51463371 51463498 -15204507 - MIR SINE MIR -12 250 121 939 240 75 102 chr20 51463604 51464046 -15203959 + LTR33A LTR ERVL 87 516 -7 1501 237 108 14 chr20 51464179 51464614 -15203391 - MLT1K LTR MaLR 0 476 1 2306 77 0 0 chr20 51464861 51465159 -15202846 + AluY SINE Alu 1 298 -13 247 305 19 29 chr20 51465179 51465284 -15202721 - L2 LINE L2 -13 3259 3156 257 256 89 126 chr20 51465464 51465508 -15202497 + MLT1J LTR MaLR 73 117 -394 2201 84 7 7 chr20 51465508 51465816 -15202189 + AluY SINE Alu 1 308 -3 257 256 89 126 chr20 51465816 51465902 -15202103 + MLT1J LTR MaLR 117 205 -306 1725 176 0 20 chr20 51465902 51466204 -15201801 - AluJo SINE Alu -16 296 1 257 256 89 126 chr20 51466204 51466318 -15201687 + MLT1J LTR MaLR 205 309 -202 461 202 371 15 chr20 51466324 51466355 -15201650 + L2 LINE L2 1645 1664 -1650 2069 135 0 0 chr20 51466355 51466659 -15201346 - AluSx SINE Alu -8 304 1 461 202 371 15 chr20 51466659 51466894 -15201111 + L2 LINE L2 1664 2006 -1308 371 66 0 49 chr20 51466894 51466955 -15201050 - L1MB3 LINE L1 -12 6171 6114 1668 53 5 0 chr20 51466955 51467163 -15200842 + L1PA6 LINE L1 5939 6147 -7 1894 216 60 31 chr20 51467185 51467292 -15200713 - L1MB7 LINE L1 -58 6126 6024 1813 175 0 0 chr20 51467292 51467595 -15200410 + AluJo SINE Alu 1 303 -9 2095 107 7 0 chr20 51467598 51467876 -15200129 + AluSx SINE Alu 1 283 -29 1462 6 0 17 chr20 51467876 51468057 -15199948 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 2095 107 7 0 chr20 51468057 51468076 -15199929 + AluSx SINE Alu 283 300 -12 1894 216 60 31 chr20 51468076 51468483 -15199522 - L1MB7 LINE L1 -161 6023 5593 2038 209 78 139 chr20 51468483 51468991 -15199014 + L2 LINE L2 1991 2529 -784 710 132 0 19 chr20 51468991 51469097 -15198908 + FRAM SINE Alu 55 158 -18 2038 209 78 139 chr20 51469097 51469137 -15198868 + L2 LINE L2 2529 2570 -743 1608 179 17 27 chr20 51469137 51469278 -15198727 + AluJo SINE Alu 1 142 -170 2313 114 0 0 chr20 51469278 51469576 -15198429 + AluSq SINE Alu 1 298 -15 1608 179 17 27 chr20 51469576 51469730 -15198275 + AluJo SINE Alu 142 293 -19 2038 209 78 139 chr20 51469730 51470260 -15197745 + L2 LINE L2 2570 3095 -218 2031 156 0 7 chr20 51470260 51470568 -15197437 - AluSx SINE Alu -6 306 1 2038 209 78 139 chr20 51470568 51470741 -15197264 + L2 LINE L2 3095 3277 -36 534 265 80 10 chr20 51470756 51471056 -15196949 - MLT1K LTR MaLR -42 546 173 936 149 61 101 chr20 51471436 51471491 -15196514 - MER20 DNA MER1_type 0 219 163 2460 65 0 19 chr20 51471491 51471799 -15196206 + AluSg SINE Alu 1 302 -8 936 149 61 101 chr20 51471799 51471971 -15196034 - MER20 DNA MER1_type -56 163 1 515 210 32 48 chr20 51471976 51472100 -15195905 + L2 LINE L2 3191 3312 -1 185 313 108 36 chr20 51472112 51472195 -15195810 - L2 LINE L2 -40 3232 3144 1529 183 60 20 chr20 51472464 51472644 -15195361 - AluJo SINE Alu 0 312 114 240 35 0 0 chr20 51472644 51472673 -15195332 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1529 183 60 20 chr20 51472673 51472792 -15195213 - AluJo SINE Alu -198 114 1 2732 187 38 7 chr20 51472803 51473354 -15194651 - L1MB7 LINE L1 -16 6168 5601 21 36 0 0 chr20 51473519 51473547 -15194458 + AT_rich Low_complexity Low_complexity 1 28 0 330 26 0 0 chr20 51473772 51473811 -15194194 + (GA)n Simple_repeat Simple_repeat 1 39 0 * 333 0 0 0 chr20 51473810 51473847 -15194158 + (TG)n Simple_repeat Simple_repeat 1 37 0 2298 106 0 0 chr20 51474022 51474324 -15193681 + AluSx SINE Alu 1 302 -10 2179 116 0 13 chr20 51474715 51475018 -15192987 + AluSx SINE Alu 1 299 -13 1936 108 0 22 chr20 51475019 51475297 -15192708 + AluY SINE Alu 1 272 -39 405 79 26 26 chr20 51475297 51475373 -15192632 + (GAAA)n Simple_repeat Simple_repeat 3 78 0 207 0 0 0 chr20 51475897 51475920 -15192085 + (T)n Simple_repeat Simple_repeat 1 23 0 217 303 90 25 chr20 51476137 51476259 -15191746 + L2 LINE L2 2368 2497 -817 2368 119 3 0 chr20 51476302 51476613 -15191392 - AluSx SINE Alu 0 312 1 787 224 18 0 chr20 51476629 51476794 -15191211 - FRAM SINE Alu 0 40 1 554 224 30 15 chr20 51476896 51477030 -15190975 - MLT1G LTR MaLR -454 136 1 384 259 9 37 chr20 51477090 51477198 -15190807 + L2 LINE L2 3163 3267 -46 709 245 137 30 chr20 51477385 51477618 -15190387 + MIR SINE MIR 5 262 0 837 126 34 6 chr20 51477662 51477837 -15190168 + CT-rich Low_complexity Low_complexity 1 180 0 2417 102 0 0 chr20 51477842 51478230 -15189775 - AluSx SINE Alu 0 388 1 644 208 8 31 chr20 51478230 51478360 -15189645 - FLAM_A SINE Alu -6 127 1 1410 149 8 4 chr20 51478377 51478612 -15189393 - L1MB7 LINE L1 -10 6174 5939 870 300 21 8 chr20 51478803 51479040 -15188965 - MIR SINE MIR -20 242 3 924 239 115 62 chr20 51479215 51479303 -15188702 + MLT1H1 LTR MaLR 80 162 -393 1704 178 17 13 chr20 51479303 51479601 -15188404 + AluJo SINE Alu 1 299 -13 924 239 115 62 chr20 51479601 51479964 -15188041 + MLT1H1 LTR MaLR 162 555 0 321 327 31 44 chr20 51480091 51480250 -15187755 + LTR67 LTR ERVL 130 286 -271 1517 261 54 19 chr20 51480470 51480949 -15187056 - MLT1J LTR MaLR -12 499 4 1561 205 113 14 chr20 51481006 51481441 -15186564 - MER66A LTR ERV1 0 601 100 1976 111 64 4 chr20 51481602 51481882 -15186123 - AluSx SINE Alu -15 297 1 198 392 0 0 chr20 51482020 51482094 -15185911 + L2 LINE L2 2920 2993 -279 1581 162 120 0 chr20 51482142 51482408 -15185597 - AluJb SINE Alu -14 298 1 1143 163 25 83 chr20 51482471 51482748 -15185257 - MLT1D LTR MaLR -244 261 1 811 212 40 0 chr20 51482749 51482947 -15185058 - LTR16C LTR ERVL -9 482 277 226 282 28 0 chr20 51483004 51483075 -15184930 - LTR16C LTR ERVL -323 168 96 1082 267 107 16 chr20 51483113 51483563 -15184442 + LTR16C LTR ERVL 1 491 0 1430 108 113 9 chr20 51483706 51483919 -15184086 + AluSx SINE Alu 52 286 -26 272 232 24 12 chr20 51483919 51484001 -15184004 + (CATA)n Simple_repeat Simple_repeat 3 85 0 1766 178 3 3 chr20 51484170 51484457 -15183548 + AluJb SINE Alu 1 287 -25 851 186 21 21 chr20 51484517 51484705 -15183300 - MER53 DNA DNA 0 189 2 261 324 0 9 chr20 51484711 51484822 -15183183 + GA-rich Low_complexity Low_complexity 1 110 0 2199 103 0 29 chr20 51485032 51485343 -15182662 + AluSc SINE Alu 1 302 -7 479 244 39 2 chr20 51485345 51485535 -15182470 - MLT1J LTR MaLR -219 292 56 2057 138 10 6 chr20 51485536 51485847 -15182158 - AluJb SINE Alu 0 312 1 2226 122 0 0 chr20 51485858 51486152 -15181853 - AluSx SINE Alu -8 304 11 2381 68 7 14 chr20 51486262 51486557 -15181448 - AluY SINE Alu -6 305 13 521 190 153 44 chr20 51486674 51486811 -15181194 - L2 LINE L2 0 3313 3162 390 162 15 0 chr20 51486824 51486892 -15181113 + MLT1F1 LTR MaLR 41 109 -458 493 219 102 0 chr20 51486896 51487033 -15180972 + MER20B DNA MER1_type 331 481 -302 2270 110 0 3 chr20 51487074 51487374 -15180631 + AluSc SINE Alu 1 299 -10 1316 195 168 0 chr20 51487423 51487756 -15180249 + MLT1F1 LTR MaLR 179 567 0 1026 267 104 18 chr20 51487914 51488300 -15179705 - MER20B DNA MER1_type 0 783 365 1948 160 0 3 chr20 51488309 51488603 -15179402 + AluJo SINE Alu 1 293 -19 357 149 19 36 chr20 51488613 51488828 -15179177 + AluJo SINE Alu 1 285 -17 291 114 0 0 chr20 51488828 51488872 -15179133 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 754 216 181 57 chr20 51488872 51488935 -15179070 - MER20B DNA MER1_type -429 354 300 2322 77 0 11 chr20 51488935 51489249 -15178756 + AluSx SINE Alu 1 311 0 754 216 181 57 chr20 51489249 51489499 -15178506 - MER20B DNA MER1_type -483 300 1 459 262 80 43 chr20 51489538 51489725 -15178280 - L2 LINE L2 -412 2902 2709 216 0 0 0 chr20 51489803 51489827 -15178178 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 343 224 164 33 chr20 51489846 51489998 -15178007 - MLT1H LTR MaLR 0 549 378 1716 169 7 4 chr20 51490067 51490366 -15177639 - AluJb SINE Alu 0 309 10 612 256 33 22 chr20 51490396 51490576 -15177429 - MLT1H LTR MaLR -307 242 61 232 224 149 0 chr20 51490734 51490801 -15177204 - L2 LINE L2 -228 3085 3009 196 128 21 21 chr20 51491273 51491320 -15176685 + CT-rich Low_complexity Low_complexity 5 51 0 393 295 14 45 chr20 51491351 51491660 -15176345 + CT-rich Low_complexity Low_complexity 1 318 -676 1954 116 10 10 chr20 51491660 51491962 -15176043 - AluJo SINE Alu -10 302 1 393 295 14 45 chr20 51491962 51492377 -15175628 + CT-rich Low_complexity Low_complexity 318 994 0 23 78 0 0 chr20 51492535 51492586 -15175419 + GC_rich Low_complexity Low_complexity 1 51 0 30 45 0 0 chr20 51492609 51492653 -15175352 + GC_rich Low_complexity Low_complexity 1 44 0 220 273 23 45 chr20 51492903 51492991 -15175014 - MIR SINE MIR -59 149 64 630 230 8 8 chr20 51493340 51493466 -15174539 + L2 LINE L2 3187 3312 -1 711 271 66 103 chr20 51493552 51493929 -15174076 - L2 LINE L2 -1 3312 2950 2495 72 0 10 chr20 51494991 51495296 -15172709 + AluY SINE Alu 1 302 -9 369 261 352 35 chr20 51495504 51495703 -15172302 + MIR SINE MIR 1 262 0 21 0 0 0 chr20 51495703 51495724 -15172281 + AT_rich Low_complexity Low_complexity 1 21 0 1705 195 0 3 chr20 51496317 51496604 -15171401 + AluJo SINE Alu 1 286 -26 521 235 276 15 chr20 51496751 51496947 -15171058 - MIR SINE MIR -13 249 3 1233 156 14 23 chr20 51497217 51497435 -15170570 - AluJb SINE Alu -12 300 85 469 276 158 24 chr20 51497703 51497949 -15170056 - L2 LINE L2 -1393 1921 1643 2327 107 3 0 chr20 51498170 51498480 -15169525 + AluSx SINE Alu 1 311 -1 384 303 76 0 chr20 51498798 51498917 -15169088 + MIR SINE MIR 108 235 -27 2903 3 0 0 chr20 51498956 51499261 -15168744 - AluY SINE Alu -6 305 1 2527 48 7 0 chr20 51499267 51499557 -15168448 - AluY SINE Alu -19 292 1 2170 326 68 38 chr20 51500218 51500820 -15167185 - L2 LINE L2 -66 3206 2624 1270 182 252 6 chr20 51500820 51501138 -15166867 - MSTD LTR MaLR 0 396 1 2170 326 68 38 chr20 51501138 51502088 -15165917 - L2 LINE L2 -648 2624 1609 1406 235 103 55 chr20 51502094 51502922 -15165083 - L2 LINE L2 -1 3312 2470 324 316 128 53 chr20 51502934 51503519 -15164486 - L2 LINE L2 -1801 1513 885 553 214 32 70 chr20 51504073 51504260 -15163745 + MIR SINE MIR 13 192 -70 208 176 0 0 chr20 51504416 51504450 -15163555 - L2 LINE L2 -12 3260 3227 246 233 21 167 chr20 51504554 51504601 -15163404 - MIR SINE MIR -61 147 95 2422 101 0 0 chr20 51504601 51504908 -15163097 + AluSx SINE Alu 1 307 -5 246 233 21 167 chr20 51504908 51505037 -15162968 - MIR SINE MIR -113 95 2 6064 57 0 3 chr20 51505109 51505860 -15162145 - L1PA8 LINE L1 -11 6161 5413 7195 59 6 36 chr20 51505861 51506842 -15161163 - SVA Other Other -5 1381 430 1720 104 5 57 chr20 51506903 51507288 -15160717 - SVA Other Other -520 866 502 2185 123 0 7 chr20 51507288 51507590 -15160415 - AluSp SINE Alu -13 300 1 869 101 14 0 chr20 51507590 51507729 -15160276 - L1P LINE L1 -743 5429 5289 278 163 0 0 chr20 51507816 51507865 -15160140 + Alu SINE Alu 248 296 -4 618 285 33 19 chr20 51507890 51508104 -15159901 + L2 LINE L2 2553 2769 -545 720 162 7 54 chr20 51508162 51508310 -15159695 - FLAM_C SINE Alu -1 142 2 329 264 210 14 chr20 51508820 51508979 -15159026 + MIR SINE MIR 21 204 -4 1038 189 53 0 chr20 51509205 51509449 -15158556 - L1MA4 LINE L1 -6 6294 6038 279 276 41 8 chr20 51509475 51509598 -15158407 + Charlie8 DNA MER1_type 98 224 -2193 2344 105 7 0 chr20 51509731 51510036 -15157969 - AluSg SINE Alu -3 307 1 21 0 0 0 chr20 51510976 51510997 -15157008 + AT_rich Low_complexity Low_complexity 1 21 0 545 89 0 11 chr20 51511021 51511111 -15156894 + L1MB3 LINE L1 6088 6176 -7 318 216 204 96 chr20 51511124 51511291 -15156714 - L1ME4a LINE L1 -8 6113 5929 835 209 80 59 chr20 51511349 51511465 -15156540 + MIR SINE MIR 19 131 -131 1054 190 32 23 chr20 51511465 51511681 -15156324 + MER20 DNA MER1_type 1 218 -1 835 209 80 59 chr20 51511681 51511803 -15156202 + MIR SINE MIR 131 262 0 780 199 0 0 chr20 51513072 51513208 -15154797 - FLAM_C SINE Alu -2 141 6 1756 102 0 4 chr20 51513237 51513472 -15154533 - AluSq SINE Alu -2 311 78 2827 204 86 3 chr20 51513522 51514125 -15153880 + MER82 DNA MER2_type 1 653 0 301 295 43 72 chr20 51514161 51514300 -15153705 - MIR3 SINE MIR -67 141 7 1087 164 0 0 chr20 51514328 51514499 -15153506 - FRAM SINE Alu -6 170 1 21 0 0 0 chr20 51514551 51514572 -15153433 + AT_rich Low_complexity Low_complexity 1 21 0 372 321 8 0 chr20 51514637 51514771 -15153234 + MER117 DNA MER1_type 63 197 0 381 333 53 29 chr20 51515090 51515261 -15152744 - MIR SINE MIR 0 262 88 1628 147 0 41 chr20 51515261 51515527 -15152478 - AluJb SINE Alu -55 257 3 979 226 9 27 chr20 51515569 51515649 -15152356 + MER58A DNA MER1_type 1 81 -2339 1806 192 41 14 chr20 51515649 51516013 -15151992 - MLT1A2 LTR MaLR 0 374 1 979 226 9 27 chr20 51516013 51516153 -15151852 + MER58A DNA MER1_type 81 217 -7 1713 147 30 40 chr20 51516345 51516644 -15151361 + AluJb SINE Alu 1 296 -16 23 0 0 0 chr20 51517236 51517259 -15150746 + AT_rich Low_complexity Low_complexity 1 23 0 1422 161 89 66 chr20 51517259 51517563 -15150442 - AluJb SINE Alu -1 311 1 1662 127 0 20 chr20 51517565 51517810 -15150195 - AluJo SINE Alu -12 300 61 2163 137 0 3 chr20 51517880 51518179 -15149826 + AluSx SINE Alu 1 298 -14 727 158 79 0 chr20 51518186 51518300 -15149705 + FLAM_C SINE Alu 2 124 -19 1871 148 22 4 chr20 51518342 51518620 -15149385 + AluSx SINE Alu 1 283 -29 245 97 0 0 chr20 51518589 51518620 -15149385 + Alu SINE Alu 253 307 0 184 42 0 0 chr20 51518620 51518644 -15149361 + (TAAA)n Simple_repeat Simple_repeat 2 76 0 309 274 53 21 chr20 51519716 51519811 -15148194 + L2 LINE L2 3185 3282 -31 463 281 14 27 chr20 51520671 51520847 -15147158 - MER5A DNA MER1_type -1 188 4 648 136 102 157 chr20 51521213 51521276 -15146729 - L1MB8 LINE L1 -2 6176 6111 1813 174 3 7 chr20 51521276 51521575 -15146430 + AluJo SINE Alu 1 298 -14 387 60 0 0 chr20 51521575 51521625 -15146380 + (TA)n Simple_repeat Simple_repeat 2 51 0 648 136 102 157 chr20 51521625 51521795 -15146210 - L1MB8 LINE L1 -65 6113 5955 1745 135 0 4 chr20 51522912 51523171 -15144834 - AluSx SINE Alu -5 307 50 2079 164 0 0 chr20 51523906 51524239 -15143766 - AluJb SINE Alu 0 333 1 230 295 74 0 chr20 51524883 51524978 -15143027 + L2 LINE L2 3206 3307 -6 22 0 0 0 chr20 51525708 51525730 -15142275 + AT_rich Low_complexity Low_complexity 1 22 0 455 282 225 19 chr20 51525789 51526311 -15141694 + L2 LINE L2 2654 3310 -3 819 209 6 6 chr20 51526555 51526713 -15141292 + FRAM SINE Alu 1 158 -8 476 127 0 0 chr20 51527149 51527220 -15140785 + AluS SINE Alu 9 79 -234 2103 104 3 24 chr20 51527346 51527643 -15140362 - AluSx SINE Alu -21 291 1 239 250 113 0 chr20 51527649 51527729 -15140276 + L2 LINE L2 3184 3272 0 544 249 45 93 chr20 51527799 51528068 -15139937 - MLT1J LTR MaLR -151 360 105 548 208 232 0 chr20 51528957 51529164 -15138841 - MIR SINE MIR 0 262 8 787 240 122 80 chr20 51529167 51529201 -15138804 - Charlie8 DNA MER1_type -65 276 245 2509 56 0 20 chr20 51529201 51529505 -15138500 - AluY SINE Alu -13 298 1 787 240 122 80 chr20 51529505 51529923 -15138082 - Charlie8 DNA MER1_type -96 245 1 230 208 19 0 chr20 51530055 51530108 -15137897 - MIR3 SINE MIR -2 206 153 1025 132 0 11 chr20 51530154 51530173 -15137832 + (TCCC)n Simple_repeat Simple_repeat 1 198 0 1025 132 0 11 chr20 51530173 51530355 -15137650 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 1794 150 37 4 chr20 51530387 51530660 -15137345 - AluJb SINE Alu -26 286 5 6656 116 55 58 chr20 51530791 51531247 -15136758 - Tigger3b DNA MER2_type -1797 1231 775 2284 100 3 0 chr20 51531247 51531546 -15136459 - AluSq SINE Alu -13 300 1 6656 116 55 58 chr20 51531546 51531563 -15136442 - Tigger3b DNA MER2_type -2253 775 759 2380 78 0 0 chr20 51531563 51531876 -15136129 + AluSc SINE Alu 1 313 0 6656 116 55 58 chr20 51531876 51532345 -15135660 - Tigger3b DNA MER2_type -2269 759 290 2347 102 7 0 chr20 51532345 51532640 -15135365 + AluSx SINE Alu 1 297 -15 6656 116 55 58 chr20 51532640 51532660 -15135345 - Tigger3b DNA MER2_type -2738 290 271 2313 110 0 3 chr20 51532660 51532969 -15135036 + AluSp SINE Alu 1 308 -5 6656 116 55 58 chr20 51532969 51533234 -15134771 - Tigger3b DNA MER2_type -2757 271 3 308 235 31 0 chr20 51533239 51533337 -15134668 - MER113 DNA MER1_type? -420 101 1 1510 148 126 0 chr20 51533690 51533953 -15134052 + AluJb SINE Alu 1 296 -6 2285 84 7 0 chr20 51534890 51535176 -15132829 + AluSg SINE Alu 1 288 -22 494 213 77 63 chr20 51535568 51535775 -15132230 - MER112 DNA MER1_type -49 211 2 377 209 12 12 chr20 51535933 51536019 -15131986 + L2 LINE L2 3223 3308 -5 230 284 124 16 chr20 51537146 51537340 -15130665 - L1ME4a LINE L1 -98 6023 5809 646 182 57 25 chr20 51537446 51537605 -15130400 - MER106B DNA MER1_type 0 1059 896 1597 202 17 7 chr20 51537607 51537909 -15130096 - AluJb SINE Alu -7 305 1 606 246 127 28 chr20 51537980 51538232 -15129773 - L1ME4a LINE L1 -227 5894 5618 660 169 51 8 chr20 51538247 51538365 -15129640 + FLAM_A SINE Alu 1 123 -10 242 320 45 45 chr20 51538426 51538582 -15129423 - L1ME4a LINE L1 -519 5602 5447 23 42 0 21 chr20 51538728 51538757 -15129248 + AT_rich Low_complexity Low_complexity 1 30 -17 2524 70 0 0 chr20 51538757 51539056 -15128949 - AluY SINE Alu -12 299 1 23 42 0 21 chr20 51539056 51539074 -15128931 + AT_rich Low_complexity Low_complexity 30 47 0 1354 122 235 16 chr20 51539181 51539428 -15128577 - AluSx SINE Alu 0 302 2 1026 173 0 0 chr20 51539730 51539898 -15128107 - AluJb SINE Alu -18 294 127 188 301 203 7 chr20 51540516 51540659 -15127346 + MIR SINE MIR 21 191 -71 2072 146 0 0 chr20 51540796 51541090 -15126915 + AluSx SINE Alu 1 294 -18 2455 67 6 6 chr20 51541092 51541404 -15126601 + AluSq SINE Alu 1 312 -1 2543 55 0 0 chr20 51542385 51542675 -15125330 + AluY SINE Alu 3 292 -19 451 235 118 7 chr20 51542752 51542888 -15125117 + Charlie8 DNA MER1_type 52 202 -2215 536 208 28 0 chr20 51543344 51543450 -15124555 - MER81 DNA DNA -1 113 5 241 314 108 8 chr20 51543618 51543754 -15124251 - MIR SINE MIR -57 151 33 611 229 179 54 chr20 51544082 51544361 -15123644 - L2 LINE L2 -1 3312 2999 2196 99 48 0 chr20 51544882 51545175 -15122830 - AluSx SINE Alu -5 307 1 35 24 0 0 chr20 51545184 51545226 -15122779 + AT_rich Low_complexity Low_complexity 1 42 0 882 181 7 19 chr20 51545955 51546110 -15121895 - FRAM SINE Alu -13 153 1 317 243 201 12 chr20 51546114 51546283 -15121722 - L1M4 LINE L1 -1318 4828 4628 2144 112 0 3 chr20 51546283 51546579 -15121426 + AluSg SINE Alu 1 295 -15 2487 68 0 0 chr20 51547290 51547586 -15120419 + AluY SINE Alu 1 296 -15 379 32 16 48 chr20 51547679 51547741 -15120264 + (TTTTA)n Simple_repeat Simple_repeat 5 64 0 39997 75 7 8 chr20 51547741 51553891 -15114114 - L1PA6 LINE L1 0 6154 11 350 214 130 30 chr20 51553905 51554036 -15113969 - L1MC4 LINE L1 -124 7918 7775 362 314 180 4 chr20 51554198 51554530 -15113475 + L2 LINE L2 2641 3068 -245 798 136 56 0 chr20 51554695 51554820 -15113185 + FLAM_C SINE Alu 1 132 -1 1435 259 51 49 chr20 51554838 51555305 -15112700 - MLT1J LTR MaLR -38 473 6 464 181 218 8 chr20 51556492 51556625 -15111380 - MIR SINE MIR -24 238 78 514 276 95 1 chr20 51556893 51557095 -15110910 - MIR SINE MIR -6 256 37 1820 122 68 14 chr20 51557110 51557388 -15110617 + AluSx SINE Alu 1 293 -19 1695 181 0 17 chr20 51557473 51557765 -15110240 - AluJb SINE Alu -22 290 4 204 328 35 0 chr20 51558289 51558347 -15109658 + L2 LINE L2 3187 3246 -26 244 227 349 38 chr20 51558348 51558480 -15109525 + MER96 DNA MER1_type? 1 173 -2 2324 98 7 0 chr20 51558545 51558851 -15109154 - AluSx SINE Alu -4 308 1 883 254 20 16 chr20 51559768 51560020 -15107985 + MIR SINE MIR 2 254 -8 2289 100 3 0 chr20 51560661 51560951 -15107054 + AluSp SINE Alu 1 291 -22 334 289 44 50 chr20 51561333 51561492 -15106513 + MIR SINE MIR 20 177 -85 360 263 14 75 chr20 51562393 51562606 -15105399 + L1ME4a LINE L1 5636 5835 -286 755 217 101 23 chr20 51562623 51562881 -15105124 + L1MC5 LINE L1 7246 7523 -438 319 260 113 7 chr20 51562978 51563128 -15104877 + L1ME4a LINE L1 5956 6121 0 337 314 209 0 chr20 51563226 51563417 -15104588 + MIR SINE MIR 16 246 -16 1858 146 10 33 chr20 51563524 51563826 -15104179 + AluJo SINE Alu 1 295 -17 664 276 190 11 chr20 51564578 51564951 -15103054 - L2 LINE L2 0 3313 2874 658 282 14 28 chr20 51565843 51566059 -15101946 - MIR SINE MIR -31 231 19 236 198 0 23 chr20 51566079 51566165 -15101840 + MIR SINE MIR 1 184 -78 2165 86 4 7 chr20 51566951 51567229 -15100776 + AluY SINE Alu 15 291 -20 1983 99 25 28 chr20 51567240 51567523 -15100482 + AluSc SINE Alu 15 296 -13 374 184 114 114 chr20 51567644 51567758 -15100247 - L1MB7 LINE L1 -142 6042 5929 25 51 0 0 chr20 51567779 51567818 -15100187 + AT_rich Low_complexity Low_complexity 1 39 0 261 0 0 0 chr20 51568029 51568058 -15099947 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 2093 121 0 0 chr20 51568061 51568334 -15099671 - AluSx SINE Alu -37 275 3 2225 109 0 7 chr20 51568621 51568923 -15099082 - AluSx SINE Alu -12 300 1 2203 116 0 7 chr20 51569719 51570012 -15097993 + AluSg SINE Alu 1 291 -19 195 39 0 0 chr20 51570222 51570230 -15097775 + (TATG)n Simple_repeat Simple_repeat 2 9 -18 2531 69 3 0 chr20 51570230 51570536 -15097469 + AluY SINE Alu 1 307 -4 195 39 0 0 chr20 51570536 51570553 -15097452 + (TATG)n Simple_repeat Simple_repeat 8 27 0 448 275 92 14 chr20 51570786 51570928 -15097077 + MER63A DNA MER1_type 58 210 0 1814 140 77 0 chr20 51571818 51572103 -15095902 - AluSx SINE Alu -5 307 1 249 250 104 0 chr20 51572607 51572703 -15095302 - L1MB3 LINE L1 -267 5916 5811 2042 150 14 17 chr20 51572704 51572728 -15095277 - L1MB2 LINE L1 -7 6164 6141 1680 132 59 30 chr20 51572728 51573032 -15094973 + AluSq SINE Alu 1 313 0 2042 150 14 17 chr20 51573032 51573367 -15094638 - L1MB2 LINE L1 -30 6141 5806 688 175 0 0 chr20 51573368 51573488 -15094517 - AluSp/q SINE Alu -6 307 188 1584 118 0 9 chr20 51573488 51573709 -15094296 - AluSq SINE Alu -94 219 1 2302 109 3 10 chr20 51573718 51574031 -15093974 - AluSx SINE Alu -1 311 1 2260 102 0 0 chr20 51574086 51574399 -15093606 + AluSx SINE Alu 1 313 0 791 108 54 48 chr20 51574789 51574847 -15093158 + L1MB2 LINE L1 6005 6061 -110 1689 124 117 11 chr20 51574847 51575120 -15092885 + AluSx SINE Alu 2 303 -9 791 108 54 48 chr20 51575120 51575227 -15092778 + L1MB2 LINE L1 6061 6171 0 189 107 0 0 chr20 51575253 51575281 -15092724 + (A)n Simple_repeat Simple_repeat 1 28 0 2148 91 36 0 chr20 51575283 51575579 -15092426 + AluSx SINE Alu 1 306 0 2597 74 0 0 chr20 51576220 51576531 -15091474 + AluY SINE Alu 1 311 0 2328 75 7 0 chr20 51576777 51577092 -15090913 + AluSq SINE Alu 1 317 0 280 170 20 90 chr20 51577113 51577213 -15090792 + L1MC5 LINE L1 7837 7929 -32 508 278 95 38 chr20 51577228 51577647 -15090358 - L2 LINE L2 -137 3176 2735 525 107 0 0 chr20 51577667 51577742 -15090263 - Alu SINE Alu -234 76 2 610 243 211 12 chr20 51577744 51577991 -15090014 - L2 LINE L2 -563 2751 2456 2184 128 3 0 chr20 51578054 51578350 -15089655 - AluSq SINE Alu -14 299 3 216 0 0 0 chr20 51578356 51578380 -15089625 + (T)n Simple_repeat Simple_repeat 1 24 0 435 261 25 25 chr20 51578752 51578909 -15089096 + L1ME LINE L1 5516 5672 -449 2377 92 3 0 chr20 51579044 51579337 -15088668 + AluSx SINE Alu 1 294 -18 2183 122 10 0 chr20 51579471 51579765 -15088240 - AluSx SINE Alu -9 303 7 670 153 0 0 chr20 51580131 51580229 -15087776 + AluSg/x SINE Alu 199 296 -14 404 284 116 60 chr20 51580580 51580830 -15087175 - MLT1L LTR MaLR 0 615 352 190 192 58 0 chr20 51581287 51581339 -15086666 - MIR SINE MIR -31 231 177 3350 178 20 40 chr20 51581492 51582151 -15085854 - MER82 DNA MER2_type 0 653 8 452 259 8 30 chr20 51582162 51582293 -15085712 - MIR SINE MIR -109 153 26 195 42 0 0 chr20 51582591 51582615 -15085390 + (TG)n Simple_repeat Simple_repeat 1 24 0 183 42 0 0 chr20 51583260 51583284 -15084721 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 505 264 81 17 chr20 51583479 51583653 -15084352 - MIR SINE MIR -1 261 77 599 273 38 0 chr20 51583762 51583945 -15084060 + MIR SINE MIR 67 256 -6 777 197 0 0 chr20 51585408 51585540 -15082465 + FLAM_C SINE Alu 2 133 -10 2070 146 7 0 chr20 51585867 51586176 -15081829 - AluSx SINE Alu -1 311 1 413 277 159 62 chr20 51586177 51586688 -15081317 - L1ME4a LINE L1 -286 5835 5283 21 0 0 0 chr20 51586690 51586711 -15081294 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr20 51586807 51586828 -15081177 + AT_rich Low_complexity Low_complexity 1 21 0 325 198 176 44 chr20 51586906 51586997 -15081008 - L1ME LINE L1 -507 5614 5512 27 0 0 0 chr20 51587843 51587870 -15080135 + AT_rich Low_complexity Low_complexity 1 27 0 283 203 54 14 chr20 51588600 51588674 -15079331 - L1ME LINE L1 -247 5874 5798 2350 96 3 10 chr20 51588985 51589299 -15078706 - AluSx SINE Alu 0 312 1 245 192 39 62 chr20 51589952 51590082 -15077923 + (CATATA)n Simple_repeat Simple_repeat 5 131 0 734 300 85 13 chr20 51590124 51590441 -15077564 - L1MC4a LINE L1 -1925 5883 5544 260 211 60 45 chr20 51590474 51590607 -15077398 - L1MC4a LINE L1 -2381 5427 5293 371 268 173 30 chr20 51590740 51590908 -15077097 - MIR SINE MIR -31 231 40 2067 149 0 0 chr20 51591205 51591507 -15076498 - AluJo SINE Alu -8 304 3 22 0 0 0 chr20 51591816 51591838 -15076167 + AT_rich Low_complexity Low_complexity 1 22 0 865 158 0 0 chr20 51591883 51592016 -15075989 + FLAM_C SINE Alu 1 133 0 21 57 0 0 chr20 51592016 51592051 -15075954 + AT_rich Low_complexity Low_complexity 1 35 0 401 205 75 37 chr20 51592261 51592329 -15075676 - LTR50 LTR ERVL -13 782 718 2217 97 13 10 chr20 51592329 51592627 -15075378 + AluSg SINE Alu 1 299 -11 2133 104 13 26 chr20 51592632 51592940 -15075065 + AluSx SINE Alu 1 304 -8 401 205 75 37 chr20 51592940 51593026 -15074979 - LTR50 LTR ERVL -80 715 616 768 110 0 90 chr20 51593041 51593205 -15074800 + FLAM_C SINE Alu 1 133 0 548 285 129 50 chr20 51593336 51593597 -15074408 + L2 LINE L2 2976 3266 -47 801 164 8 0 chr20 51593597 51593725 -15074280 + FLAM_C SINE Alu 1 129 -4 548 285 129 50 chr20 51593725 51593765 -15074240 + L2 LINE L2 3266 3301 -12 787 209 52 57 chr20 51594003 51594213 -15073792 - MER63A DNA MER1_type -1 209 1 2886 13 0 0 chr20 51594290 51594601 -15073404 - AluY SINE Alu 0 311 1 1765 182 0 38 chr20 51594718 51595036 -15072969 - AluJb SINE Alu -6 306 1 474 264 102 59 chr20 51595100 51595403 -15072602 - MER102b DNA MER1_type 0 341 26 2141 87 22 4 chr20 51595481 51595779 -15072226 + AluSg SINE Alu 1 303 0 235 353 15 37 chr20 51595793 51595929 -15072076 - Tigger8 DNA MER2_type -438 228 96 2221 115 0 26 chr20 51596455 51596768 -15071237 + AluSx SINE Alu 1 305 -7 1727 150 41 24 chr20 51596816 51597110 -15070895 + AluJo SINE Alu 1 299 -13 2192 143 0 0 chr20 51597348 51597649 -15070356 - AluSx SINE Alu -11 301 1 1284 99 0 6 chr20 51597837 51598009 -15069996 - AluSc SINE Alu 0 309 139 626 95 0 0 chr20 51598011 51598095 -15069910 - AluY SINE Alu -233 85 2 2016 132 10 0 chr20 51598178 51598466 -15069539 + AluJb SINE Alu 1 291 -21 1670 182 14 10 chr20 51598609 51598743 -15069262 + AluJo SINE Alu 1 133 -179 2321 75 20 0 chr20 51598743 51599035 -15068970 + AluSp SINE Alu 1 298 -15 1670 182 14 10 chr20 51599035 51599191 -15068814 + AluJo SINE Alu 133 292 -20 638 283 71 32 chr20 51600019 51600358 -15067647 + L1ME LINE L1 5471 5822 -299 2237 111 0 3 chr20 51600359 51600656 -15067349 - AluSx SINE Alu -16 296 1 2262 99 10 7 chr20 51600666 51600968 -15067037 - AluSg SINE Alu -7 303 1 809 120 0 0 chr20 51601090 51601207 -15066798 - FLAM_A SINE Alu -10 132 16 2278 87 24 0 chr20 51601480 51601769 -15066236 + AluSq SINE Alu 1 296 -17 532 176 82 82 chr20 51601881 51601984 -15066021 - MIR SINE MIR -11 251 146 2057 156 10 0 chr20 51601984 51602292 -15065713 - AluSx SINE Alu -1 311 1 532 176 82 82 chr20 51602292 51602370 -15065635 - MIR SINE MIR -115 147 70 1811 141 3 17 chr20 51602410 51602707 -15065298 + AluJb SINE Alu 14 306 -6 773 184 7 13 chr20 51602999 51603151 -15064854 - MER105 DNA DNA -53 151 1 2046 141 3 3 chr20 51603358 51603656 -15064349 - AluJb SINE Alu -14 298 1 1748 148 10 24 chr20 51607689 51607987 -15060018 - AluJb SINE Alu -13 299 6 721 176 0 46 chr20 51608181 51608312 -15059693 - FLAM_C SINE Alu -8 125 1 1343 162 58 4 chr20 51608344 51608585 -15059420 + AluJo SINE Alu 51 304 -8 412 200 0 13 chr20 51608836 51608911 -15059094 - FRAM/FAM SINE Alu -111 65 1 464 206 10 20 chr20 51609018 51609120 -15058885 - AluJb SINE Alu -19 293 193 1763 153 0 33 chr20 51609371 51609671 -15058334 - AluJo SINE Alu -22 290 1 2048 135 10 26 chr20 51609725 51610036 -15057969 + AluSx SINE Alu 1 306 -6 1108 86 0 0 chr20 51610042 51610181 -15057824 - AluSq/x SINE Alu -173 139 1 764 134 18 0 chr20 51610366 51610478 -15057527 + AluJb SINE Alu 2 115 -197 367 202 131 89 chr20 51610584 51610752 -15057253 - MIR SINE MIR -75 187 13 694 154 8 0 chr20 51610762 51610879 -15057126 + FLAM_C SINE Alu 1 118 -25 29 0 0 0 chr20 51610879 51610908 -15057097 + AT_rich Low_complexity Low_complexity 1 29 0 2054 142 0 0 chr20 51610908 51611196 -15056809 - AluSx SINE Alu -24 288 1 1560 284 115 10 chr20 51611404 51612013 -15055992 - MER115 DNA AcHobo -11 682 10 1830 104 0 0 chr20 51612088 51612319 -15055686 + AluSx SINE Alu 1 231 -81 687 136 0 0 chr20 51612320 51612423 -15055582 + FLAM_C SINE Alu 23 125 -18 44 20 0 0 chr20 51612423 51612474 -15055531 + AT_rich Low_complexity Low_complexity 1 51 0 1659 116 5 0 chr20 51612552 51612768 -15055237 - AluSg/x SINE Alu -19 293 77 2250 98 17 7 chr20 51612812 51613108 -15054897 + AluSx SINE Alu 1 299 -13 2164 107 13 23 chr20 51613364 51613663 -15054342 - AluSx SINE Alu -16 296 1 2555 64 0 0 chr20 51614174 51614470 -15053535 + AluY SINE Alu 1 296 -15 2327 91 10 3 chr20 51614609 51614916 -15053089 - AluSc SINE Alu 0 309 1 285 139 167 42 chr20 51614977 51615049 -15052956 - L2 LINE L2 -1 3312 3232 2310 86 17 0 chr20 51615098 51615389 -15052616 - AluSp SINE Alu -17 296 1 1789 141 25 7 chr20 51615391 51615667 -15052338 + AluJo SINE Alu 28 308 -4 2186 112 0 26 chr20 51615672 51615984 -15052021 + AluSg SINE Alu 1 304 -6 803 188 74 0 chr20 51616125 51616301 -15051704 - MER53 DNA DNA 0 189 1 598 254 92 36 chr20 51616324 51616604 -15051401 - L2 LINE L2 -234 3079 2784 657 106 0 0 chr20 51616626 51616720 -15051285 + AluS SINE Alu 2 95 -217 610 301 6 0 chr20 51617878 51618061 -15049944 + MIR SINE MIR 12 195 -67 1766 77 0 34 chr20 51618288 51618563 -15049442 - AluSg/x SINE Alu 0 352 86 422 287 103 31 chr20 51618564 51618787 -15049218 + L2 LINE L2 3051 3289 -24 284 271 164 16 chr20 51619112 51619234 -15048771 - L2 LINE L2 -1 3312 3173 333 285 161 10 chr20 51619276 51619521 -15048484 - L2 LINE L2 -264 3049 2761 1243 169 24 10 chr20 51620037 51620244 -15047761 - AluJo SINE Alu -102 210 1 1525 165 8 12 chr20 51620545 51620799 -15047206 + AluJb SINE Alu 36 288 -24 326 42 21 0 chr20 51620950 51620998 -15047007 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 1489 159 0 63 chr20 51621000 51621149 -15046856 - AluJb SINE Alu -30 282 160 2389 80 0 46 chr20 51621149 51621474 -15046531 - AluSq SINE Alu -3 310 1 1489 159 0 63 chr20 51621474 51621625 -15046380 - AluJb SINE Alu -152 160 1 809 229 95 95 chr20 51621755 51622027 -15045978 - L2 LINE L2 -11 3302 3028 1996 117 10 7 chr20 51622027 51622317 -15045688 + AluSx SINE Alu 1 291 -21 809 229 95 95 chr20 51622317 51622445 -15045560 - L2 LINE L2 -284 3029 2902 1879 169 7 0 chr20 51622464 51622759 -15045246 - AluJo SINE Alu -15 297 1 408 222 119 32 chr20 51622974 51623100 -15044905 - L2 LINE L2 -5 3308 3172 225 0 0 0 chr20 51623377 51623402 -15044603 + (TGG)n Simple_repeat Simple_repeat 1 25 0 1169 171 179 12 chr20 51623404 51623650 -15044355 - AluJo SINE Alu -15 287 1 701 203 0 17 chr20 51623792 51623910 -15044095 + FLAM_A SINE Alu 1 116 -17 216 0 0 0 chr20 51623911 51623935 -15044070 + (T)n Simple_repeat Simple_repeat 1 24 0 2243 106 26 0 chr20 51624111 51624414 -15043591 - AluSq SINE Alu -2 311 1 1077 125 6 6 chr20 51624553 51624713 -15043292 - AluJo SINE Alu -113 199 40 255 186 43 43 chr20 51624760 51624830 -15043175 + MER103 DNA DNA 83 152 -14 1003 181 126 28 chr20 51625811 51626065 -15041940 - MER46C DNA MER2_type -30 308 30 1814 169 0 7 chr20 51626200 51626496 -15041509 + AluJb SINE Alu 3 296 -16 500 208 31 50 chr20 51626863 51626876 -15041129 - L1MB8 LINE L1 0 6184 6172 2121 103 17 0 chr20 51626876 51627167 -15040838 - AluSx SINE Alu -16 296 1 500 208 31 50 chr20 51627167 51627330 -15040675 - L1MB8 LINE L1 -12 6172 6012 991 111 195 16 chr20 51627496 51627611 -15040394 - L1MA4 LINE L1 -2 6298 6205 360 0 0 0 chr20 51627611 51627651 -15040354 + (TG)n Simple_repeat Simple_repeat 1 40 0 991 111 195 16 chr20 51627651 51627748 -15040257 - L1MA4 LINE L1 -95 6205 6047 950 106 0 0 chr20 51627807 51627930 -15040075 + AluJb SINE Alu 1 123 -189 1465 153 12 92 chr20 51628218 51628404 -15039601 - AluSx SINE Alu -12 300 149 2284 103 0 0 chr20 51628404 51628695 -15039310 - AluSq SINE Alu -22 291 1 1465 153 12 92 chr20 51628695 51628834 -15039171 - AluSx SINE Alu -163 149 1 23 0 0 0 chr20 51629388 51629411 -15038594 + AT_rich Low_complexity Low_complexity 1 23 0 2541 51 0 0 chr20 51629613 51629908 -15038097 + AluY SINE Alu 1 295 -16 587 268 72 78 chr20 51630119 51630361 -15037644 - MER102b DNA MER1_type -1098 330 88 2165 99 0 10 chr20 51630361 51630654 -15037351 + AluSc SINE Alu 1 290 -19 587 268 72 78 chr20 51630654 51630667 -15037338 - MER102b DNA MER1_type -1340 88 76 1822 178 3 0 chr20 51630667 51630965 -15037040 + AluJo SINE Alu 1 299 -13 2232 100 17 0 chr20 51630965 51631255 -15036750 + AluSc SINE Alu 1 295 -14 2142 132 0 0 chr20 51631257 51631553 -15036452 + AluSx SINE Alu 1 296 -16 587 268 72 78 chr20 51631553 51631613 -15036392 - MER102b DNA MER1_type -1352 76 12 2528 60 0 0 chr20 51631931 51632233 -15035772 - AluY SINE Alu -7 304 3 22 0 0 54 chr20 51632236 51632250 -15035755 + AT_rich Low_complexity Low_complexity 1 14 -21 2194 78 7 4 chr20 51632250 51632565 -15035440 - AluY SINE Alu 0 317 2 22 0 0 54 chr20 51632565 51632586 -15035419 + AT_rich Low_complexity Low_complexity 14 35 0 285 176 39 0 chr20 51633384 51633435 -15034570 + MIR SINE MIR 77 129 -133 25 31 0 0 chr20 51633476 51633508 -15034497 + AT_rich Low_complexity Low_complexity 1 32 0 29 47 0 0 chr20 51633873 51633916 -15034089 + AT_rich Low_complexity Low_complexity 1 43 0 1016 139 0 14 chr20 51634185 51634329 -15033676 + FRAM SINE Alu 13 154 -22 1203 138 128 10 chr20 51634765 51634961 -15033044 + MER20 DNA MER1_type 1 219 0 1569 194 0 11 chr20 51635191 51635475 -15032530 + AluJb SINE Alu 1 281 -31 1454 174 32 42 chr20 51635636 51635946 -15032059 + AluJb SINE Alu 1 307 -5 1673 144 15 4 chr20 51636077 51636340 -15031665 - AluSx SINE Alu -3 309 44 2423 91 7 0 chr20 51636350 51636657 -15031348 - AluSq SINE Alu -4 309 1 2355 105 0 10 chr20 51637510 51637823 -15030182 + AluSx SINE Alu 1 310 -2 26 0 0 0 chr20 51638064 51638090 -15029915 + AT_rich Low_complexity Low_complexity 1 26 0 443 238 151 27 chr20 51638163 51638348 -15029657 - L1MC5 LINE L1 -45 7916 7709 25 31 0 0 chr20 51638382 51638414 -15029591 + AT_rich Low_complexity Low_complexity 1 32 0 1126 161 65 130 chr20 51638494 51638817 -15029188 - AluJo SINE Alu 0 302 1 256 247 82 0 chr20 51638826 51638899 -15029106 + L1ME LINE L1 5696 5774 -347 2324 80 0 35 chr20 51639070 51639382 -15028623 + AluY SINE Alu 1 301 -10 1594 173 0 36 chr20 51641412 51641719 -15026286 + AluJo SINE Alu 1 296 -16 1378 160 35 64 chr20 51642273 51642474 -15025531 - AluJo SINE Alu -38 274 82 2011 51 113 25 chr20 51642474 51642749 -15025256 + AluY SINE Alu 1 299 -12 1378 160 35 64 chr20 51642749 51642829 -15025176 - AluJo SINE Alu -230 82 1 1844 163 0 7 chr20 51643785 51644074 -15023931 - AluJb SINE Alu -23 289 3 1736 191 3 3 chr20 51644255 51644549 -15023456 - AluJo SINE Alu -18 294 1 1345 201 16 0 chr20 51644696 51644940 -15023065 + AluJb SINE Alu 1 248 -64 378 0 0 0 chr20 51644940 51644982 -15023023 + (TG)n Simple_repeat Simple_repeat 2 43 0 853 97 14 97 chr20 51644988 51645133 -15022872 - FLAM_C SINE Alu 0 133 1 2009 139 7 0 chr20 51646601 51646889 -15021116 - AluSx SINE Alu -17 295 6 2246 82 7 0 chr20 51646929 51647249 -15020756 - AluSp SINE Alu 0 322 1 2165 136 0 3 chr20 51647284 51647594 -15020411 - AluSx SINE Alu -3 309 1 2280 113 0 0 chr20 51647914 51648223 -15019782 - AluSx SINE Alu -3 309 1 2303 93 0 0 chr20 51648487 51648778 -15019227 + AluSg SINE Alu 1 291 -19 367 261 75 37 chr20 51648848 51649009 -15018996 - L1MC5 LINE L1 -37 7924 7758 280 200 93 111 chr20 51649479 51649664 -15018341 - L1MC5 LINE L1 -290 7671 7489 2049 132 0 3 chr20 51649664 51649952 -15018053 - AluSx SINE Alu -21 291 5 280 200 93 111 chr20 51649952 51649991 -15018014 - L1MC5 LINE L1 -472 7489 7451 2165 110 3 3 chr20 51649992 51650291 -15017714 - AluSx SINE Alu -13 299 1 899 222 128 5 chr20 51650381 51650561 -15017444 + MER8 DNA MER2_type 7 216 -23 1924 141 22 0 chr20 51650561 51650831 -15017174 + AluSx SINE Alu 1 276 -36 899 222 128 5 chr20 51650831 51650853 -15017152 + MER8 DNA MER2_type 216 234 -5 234 81 0 0 chr20 51651010 51651047 -15016958 + (T)n Simple_repeat Simple_repeat 1 37 0 709 96 0 0 chr20 51651047 51651141 -15016864 - AluY SINE Alu -82 229 136 2185 90 31 0 chr20 51651249 51651539 -15016466 - AluSp SINE Alu -14 299 1 765 253 0 19 chr20 51651546 51651704 -15016301 - FRAM SINE Alu -11 155 1 2233 115 3 6 chr20 51651735 51652049 -15015956 - AluSq SINE Alu 0 313 1 1077 131 6 6 chr20 51652051 51652211 -15015794 - FRAM SINE Alu -16 160 1 625 178 117 17 chr20 51652283 51652463 -15015542 - L1MC/D LINE L1 -2333 5475 5278 263 176 0 0 chr20 51652852 51652903 -15015102 - Alu SINE Alu -3 297 247 1431 104 40 0 chr20 51653005 51653207 -15014798 - AluSq SINE Alu -103 210 1 2091 79 9 61 chr20 51653256 51653584 -15014421 - AluY SINE Alu 0 311 1 1006 169 0 6 chr20 51653584 51653744 -15014261 - FRAM SINE Alu -4 162 4 2308 87 16 10 chr20 51653776 51654085 -15013920 - AluY SINE Alu 0 311 1 1038 192 0 56 chr20 51654116 51654330 -15013675 - AluJo SINE Alu -108 204 3 2250 103 23 0 chr20 51656326 51656628 -15011377 - AluSx SINE Alu -3 309 1 203 313 75 0 chr20 51656906 51656986 -15011019 + L2 LINE L2 3201 3286 -27 2453 85 3 0 chr20 51657123 51657428 -15010577 - AluSp SINE Alu -7 306 1 2038 127 9 19 chr20 51658103 51658418 -15009587 - AluSx SINE Alu 0 312 1 267 175 79 0 chr20 51659083 51659146 -15008859 - L1ME4a LINE L1 0 6121 6054 32 0 0 23 chr20 51660580 51660607 -15007398 + AT_rich Low_complexity Low_complexity 1 28 -14 1462 179 31 34 chr20 51660607 51660898 -15007107 + AluJo SINE Alu 1 290 -22 32 0 0 23 chr20 51660898 51660913 -15007092 + AT_rich Low_complexity Low_complexity 28 42 0 2378 85 7 0 chr20 51661039 51661334 -15006671 + AluSq SINE Alu 1 297 -16 1837 166 0 10 chr20 51661904 51662206 -15005799 + AluJb SINE Alu 1 299 -13 1611 184 46 0 chr20 51662215 51662498 -15005507 + AluJb SINE Alu 1 296 -16 793 152 40 0 chr20 51663058 51663183 -15004822 + AluJo SINE Alu 1 130 -172 2082 45 0 56 chr20 51663325 51663592 -15004413 + L1PA6 LINE L1 5902 6153 -1 315 151 94 0 chr20 51663624 51663677 -15004328 - U6 snRNA snRNA -49 58 1 460 258 15 23 chr20 51663964 51664096 -15003909 + L1ME LINE L1 5523 5653 -468 240 35 0 0 chr20 51664328 51664357 -15003648 + (T)n Simple_repeat Simple_repeat 1 29 0 2343 108 0 0 chr20 51664398 51664703 -15003302 + AluSq SINE Alu 1 305 -8 1655 150 52 11 chr20 51666078 51666365 -15001640 - AluJo SINE Alu 0 312 14 501 205 262 16 chr20 51666510 51666632 -15001373 + AluJo SINE Alu 137 288 -14 576 241 165 8 chr20 51666686 51666923 -15001082 - L1MC5 LINE L1 -44 7917 7644 2148 113 0 23 chr20 51668346 51668648 -14999357 - AluSg SINE Alu -13 297 3 2391 88 10 0 chr20 51668702 51669008 -14998997 - AluSg SINE Alu -1 309 1 378 0 0 0 chr20 51669086 51669128 -14998877 + (TTG)n Simple_repeat Simple_repeat 1 42 0 576 274 101 9 chr20 51669678 51669897 -14998108 + MIR SINE MIR 5 243 -19 2183 110 10 3 chr20 51670172 51670473 -14997532 - AluSx SINE Alu -9 303 1 30 27 0 0 chr20 51670517 51670554 -14997451 + AT_rich Low_complexity Low_complexity 1 37 0 1477 111 9 26 chr20 51670973 51671199 -14996806 - AluSg/x SINE Alu -7 303 82 1882 137 0 11 chr20 51671225 51671563 -14996442 - AluSx SINE Alu 0 335 1 1279 148 5 5 chr20 51671563 51671772 -14996233 + Tigger5 DNA MER2_type 2115 2323 0 355 161 108 43 chr20 51672762 51672855 -14995150 - MIR SINE MIR -158 104 6 432 222 299 7 chr20 51674290 51674434 -14993571 + MER5A DNA MER1_type 1 186 -3 1204 171 61 41 chr20 51675467 51675760 -14992245 + AluJb SINE Alu 1 299 -13 1838 139 17 0 chr20 51675777 51676071 -14991934 + AluSq SINE Alu 1 299 -14 482 163 0 0 chr20 51676162 51676242 -14991763 - AluSq SINE Alu -14 299 220 809 87 63 24 chr20 51676242 51676369 -14991636 - AluSq SINE Alu -126 187 56 1315 175 26 69 chr20 51676904 51677207 -14990798 - AluJo SINE Alu -12 290 1 1012 235 117 35 chr20 51677820 51678070 -14989935 + L1MC4a LINE L1 6477 6764 -1044 2138 100 3 13 chr20 51678070 51678371 -14989634 + AluSg SINE Alu 1 298 -12 1012 235 117 35 chr20 51678371 51678461 -14989544 + L1MC4a LINE L1 6764 6845 -963 3147 179 124 37 chr20 51678469 51678640 -14989365 + L1MB3 LINE L1 4616 4771 -1412 1363 113 158 45 chr20 51678640 51678905 -14989100 + AluJb SINE Alu 1 295 -17 2743 9 0 36 chr20 51678905 51679234 -14988771 + AluYb8 SINE Alu 1 317 -1 3147 179 124 37 chr20 51679234 51679251 -14988754 + L1MB3 LINE L1 4771 4785 -1398 432 0 0 0 chr20 51679251 51679299 -14988706 + (CA)n Simple_repeat Simple_repeat 2 49 0 3147 179 124 37 chr20 51679299 51680057 -14987948 + L1MB3 LINE L1 4785 5476 -707 2122 98 7 0 chr20 51680057 51680352 -14987653 + AluSq SINE Alu 1 297 -16 3147 179 124 37 chr20 51680352 51680456 -14987549 + L1MB3 LINE L1 5476 5570 -613 2010 137 0 0 chr20 51680456 51680749 -14987256 - AluSx SINE Alu -19 293 1 3147 179 124 37 chr20 51680749 51681100 -14986905 + L1MB3 LINE L1 5570 6137 -46 1090 172 54 0 chr20 51681101 51681305 -14986700 + AluJo SINE Alu 86 300 -12 669 304 199 25 chr20 51681363 51682086 -14985919 + L1MC4 LINE L1 6836 7780 -157 27 0 0 0 chr20 51682172 51682199 -14985806 + AT_rich Low_complexity Low_complexity 1 27 0 1535 195 31 11 chr20 51682206 51682493 -14985512 + AluJb SINE Alu 1 293 -9 652 205 31 0 chr20 51682516 51682643 -14985362 + FLAM_C SINE Alu 2 132 -1 2036 119 10 13 chr20 51682690 51683001 -14985004 + AluSx SINE Alu 1 310 -2 2439 47 0 3 chr20 51683122 51683420 -14984585 - AluY SINE Alu -14 297 1 308 293 152 7 chr20 51685793 51686063 -14981942 + L1MC4a LINE L1 5857 6165 -1643 2049 107 0 10 chr20 51686065 51686364 -14981641 - AluSg1 SINE Alu -13 296 1 27 29 0 0 chr20 51686776 51686810 -14981195 + AT_rich Low_complexity Low_complexity 1 34 0 322 247 39 121 chr20 51686863 51686933 -14981072 - L1ME4a LINE L1 -187 5934 5860 942 123 0 0 chr20 51686933 51687063 -14980942 - FLAM_C SINE Alu -3 130 1 322 247 39 121 chr20 51687063 51687107 -14980898 - L1ME4a LINE L1 -261 5860 5838 1943 111 10 14 chr20 51687107 51687395 -14980610 - AluSx SINE Alu -21 291 5 322 247 39 121 chr20 51687395 51687461 -14980544 - L1ME4a LINE L1 -283 5838 5768 1347 153 121 14 chr20 51689940 51690222 -14977783 - AluJb SINE Alu 0 312 1 1885 194 85 126 chr20 51691033 51691553 -14976452 - MER63C DNA MER1_type -165 895 355 1775 135 59 14 chr20 51691553 51691841 -14976164 - AluSx SINE Alu -11 301 1 1885 194 85 126 chr20 51691841 51691888 -14976117 - MER63C DNA MER1_type -705 355 308 2067 85 0 14 chr20 51691888 51692171 -14975834 + AluSx SINE Alu 1 279 -33 1885 194 85 126 chr20 51692171 51692601 -14975404 - MER63C DNA MER1_type -752 308 2 302 318 19 37 chr20 51692703 51692810 -14975195 + MIR SINE MIR 46 150 -112 2041 99 0 3 chr20 51693399 51693720 -14974285 + AluSg SINE Alu 1 320 0 274 207 134 0 chr20 51694491 51694573 -14973432 + L1MC4 LINE L1 5840 5932 -1876 367 213 121 158 chr20 51695759 51696010 -14971995 + L1MC4a LINE L1 5798 6057 -1751 2020 140 0 3 chr20 51696010 51696318 -14971687 + AluSx SINE Alu 1 307 -5 2296 42 18 7 chr20 51696328 51696611 -14971394 + AluY SINE Alu 1 286 -25 367 213 121 158 chr20 51696611 51696785 -14971220 + L1MC4a LINE L1 6066 6218 -1590 611 250 48 9 chr20 51696813 51697041 -14970964 + L1M4 LINE L1 4989 5225 -921 1725 167 3 22 chr20 51697043 51697361 -14970644 + AluJo SINE Alu 1 312 0 611 213 161 75 chr20 51697390 51697836 -14970169 + L1M4 LINE L1 4676 5169 -977 2309 80 6 3 chr20 51697836 51698147 -14969858 + AluSq SINE Alu 1 312 -1 611 213 161 75 chr20 51698147 51698183 -14969822 + L1M4 LINE L1 5169 5200 -946 1992 145 0 0 chr20 51698187 51698491 -14969514 + AluSx SINE Alu 1 304 -8 1627 156 3 26 chr20 51698493 51698631 -14969374 + AluJb SINE Alu 1 141 -171 2342 81 3 0 chr20 51698631 51698938 -14969067 + AluSp SINE Alu 1 308 -5 1627 156 3 26 chr20 51698938 51699107 -14968898 + AluJb SINE Alu 141 301 -11 696 218 33 126 chr20 51699122 51699393 -14968612 + L1MC4 LINE L1 6695 6940 -1102 248 118 0 0 chr20 51699416 51699450 -14968555 + Alu SINE Alu 2 35 -268 * 309 108 0 8 chr20 51699434 51699488 -14968517 + AluSp/q SINE Alu 251 293 -10 3125 215 78 36 chr20 51699493 51700044 -14967961 + L1ME1 LINE L1 4898 5424 -742 1551 112 0 0 chr20 51700044 51700267 -14967738 - AluSg/x SINE Alu -5 307 85 3125 215 78 36 chr20 51700267 51700394 -14967611 + L1ME1 LINE L1 5424 5544 -622 2007 108 34 3 chr20 51700394 51700691 -14967314 - AluSx SINE Alu -6 306 1 3125 215 78 36 chr20 51700691 51701230 -14966775 + L1ME1 LINE L1 5544 6160 -6 582 242 208 35 chr20 51701249 51701509 -14966496 + L1MC4 LINE L1 6913 7217 -825 352 120 0 0 chr20 51701519 51701569 -14966436 + Alu SINE Alu 1 50 -251 1056 103 14 0 chr20 51701569 51701715 -14966290 + AluSg/x SINE Alu 149 296 -16 2001 206 39 71 chr20 51701799 51702324 -14965681 + L1MC4 LINE L1 7419 7921 -121 2246 106 0 0 chr20 51702324 51702625 -14965380 + AluSx SINE Alu 1 301 -11 2001 206 39 71 chr20 51702625 51702744 -14965261 + L1MC4 LINE L1 7921 8042 0 1936 141 0 0 chr20 51703240 51703548 -14964457 + AluSq SINE Alu 1 308 0 216 271 0 0 chr20 51703664 51703712 -14964293 - L2 LINE L2 -1 3312 3265 2179 100 7 0 chr20 51704913 51705213 -14962792 + AluSp SINE Alu 1 302 -11 1403 131 6 131 chr20 51706742 51707077 -14960928 + AluJb SINE Alu 1 293 -19 2252 69 7 0 chr20 51707468 51707756 -14960249 - AluSg SINE Alu -19 291 2 564 227 34 45 chr20 51707780 51707956 -14960049 + FAM SINE Alu 1 174 -1 1950 117 0 45 chr20 51708434 51708743 -14959262 - AluSq SINE Alu -18 295 1 1434 194 17 27 chr20 51708766 51709059 -14958946 + AluJo SINE Alu 1 290 -12 1586 176 14 7 chr20 51709267 51709563 -14958442 - AluJo SINE Alu -14 298 1 2867 193 90 48 chr20 51709766 51710206 -14957799 + L1MB4 LINE L1 4897 5317 -863 2166 111 0 3 chr20 51710206 51710503 -14957502 + AluSq SINE Alu 1 296 -17 2867 193 90 48 chr20 51710503 51710673 -14957332 + L1MB4 LINE L1 5317 5478 -702 2254 57 32 0 chr20 51710673 51710953 -14957052 + AluSx SINE Alu 7 295 -17 2867 193 90 48 chr20 51710953 51711567 -14956438 + L1MB4 LINE L1 5478 6169 -11 1474 194 0 27 chr20 51712070 51712364 -14955641 + AluJo SINE Alu 1 286 -26 1074 97 0 0 chr20 51712376 51712520 -14955485 + AluSq/x SINE Alu 1 144 -168 684 131 0 19 chr20 51712727 51712820 -14955185 + FLAM_C SINE Alu 23 116 -196 183 42 0 0 chr20 51712820 51712844 -14955161 + (CAA)n Simple_repeat Simple_repeat 1 24 0 2217 102 0 3 chr20 51712847 51713151 -14954854 - AluSx SINE Alu -9 303 1 393 297 47 0 chr20 51713282 51713410 -14954595 + MER5B DNA MER1_type 1 134 -44 1554 171 20 17 chr20 51713571 51713864 -14954141 - AluJb SINE Alu -18 294 1 1746 183 0 3 chr20 51714073 51714384 -14953621 + AluJb SINE Alu 1 310 -2 6215 185 42 39 chr20 51714407 51715907 -14952098 - Looper DNA T2_type 0 1558 64 2422 75 0 0 chr20 51715907 51716214 -14951791 + AluSg SINE Alu 1 307 -3 2239 93 3 0 chr20 51716214 51716514 -14951491 + AluSc SINE Alu 1 301 -8 756 198 66 18 chr20 51716519 51716686 -14951319 + FAM SINE Alu 1 175 0 6215 185 42 39 chr20 51716686 51716717 -14951288 - Looper DNA T2_type -1497 61 15 1765 162 13 7 chr20 51716749 51717052 -14950953 + AluSx SINE Alu 1 305 -7 1658 163 3 13 chr20 51717192 51717498 -14950507 + AluJb SINE Alu 10 312 0 249 289 33 11 chr20 51717614 51717704 -14950301 - L1MC/D LINE L1 -2020 5788 5697 295 324 108 86 chr20 51717777 51718101 -14949904 + L2 LINE L2 2902 3232 -40 581 242 176 61 chr20 51718234 51718820 -14949185 + L1ME4a LINE L1 5474 6121 0 1778 157 59 6 chr20 51718930 51719268 -14948737 + MER46B DNA MER2_type 1 231 -5 202 250 0 36 chr20 51719672 51719728 -14948277 - MER5A DNA MER1_type -2 187 134 1845 148 7 0 chr20 51719732 51720015 -14947990 + AluSx SINE Alu 1 285 -27 360 0 0 0 chr20 51720015 51720055 -14947950 + (CA)n Simple_repeat Simple_repeat 2 41 0 397 242 61 0 chr20 51720133 51720232 -14947773 + MER5A DNA MER1_type 63 167 -22 201 340 10 10 chr20 51720388 51720485 -14947520 - L3b LINE CR1 -180 1403 1307 1498 236 52 110 chr20 51720987 51721054 -14946951 + MLT1G1 LTR MaLR 3 72 -523 335 176 27 0 chr20 51721054 51721128 -14946877 + L1MB5 LINE L1 6088 6163 -11 2338 71 0 0 chr20 51721130 51721424 -14946581 - AluY SINE Alu -17 294 1 1498 236 52 110 chr20 51721424 51721923 -14946082 + MLT1G1 LTR MaLR 73 591 -4 2298 63 20 0 chr20 51723104 51723403 -14944602 - AluSq SINE Alu -8 305 1 2490 59 0 0 chr20 51723732 51724035 -14943970 + AluY SINE Alu 1 303 -8 786 144 7 50 chr20 51724043 51724182 -14943823 + FLAM_C SINE Alu 1 133 0 2069 117 0 16 chr20 51724187 51724504 -14943501 + AluSx SINE Alu 1 312 0 1705 92 0 4 chr20 51725347 51725576 -14942429 + AluY SINE Alu 1 228 -83 2110 103 0 3 chr20 51725576 51725866 -14942139 + AluSq SINE Alu 11 299 -14 2135 111 3 0 chr20 51727642 51727940 -14940065 - AluSx SINE Alu -13 299 1 1399 161 24 62 chr20 51728085 51728244 -14939761 - AluJo SINE Alu -18 294 149 2267 84 7 0 chr20 51728244 51728541 -14939464 - AluSc SINE Alu -10 299 1 1399 161 24 62 chr20 51728541 51728672 -14939333 - AluJo SINE Alu -163 149 15 247 220 17 17 chr20 51728675 51728734 -14939271 + MER5A DNA MER1_type 130 188 -1 2052 117 0 10 chr20 51728763 51729062 -14938943 + AluSx SINE Alu 1 296 -16 279 45 0 56 chr20 51729268 51729291 -14938714 + AluSp SINE Alu 121 144 -159 2112 110 14 0 chr20 51729291 51729582 -14938423 + AluSx SINE Alu 1 295 -17 279 45 0 56 chr20 51729582 51729616 -14938389 + AluSp SINE Alu 144 170 -133 403 77 0 0 chr20 51729616 51729694 -14938311 + Alu SINE Alu 233 310 0 21 0 0 0 chr20 51730315 51730336 -14937669 + AT_rich Low_complexity Low_complexity 1 21 0 1790 159 0 3 chr20 51730336 51730625 -14937380 - AluSx SINE Alu -24 288 1 238 143 0 0 chr20 51730752 51730787 -14937218 - Alu SINE Alu -110 190 156 805 227 105 22 chr20 51730787 51731016 -14936989 - MIR SINE MIR -8 254 7 323 44 44 0 chr20 51731511 51731556 -14936449 + AluSq/x SINE Alu 97 143 -159 1501 175 21 28 chr20 51731800 51732091 -14935914 + AluJb SINE Alu 1 289 -23 22 0 0 0 chr20 51732960 51732982 -14935023 + AT_rich Low_complexity Low_complexity 1 22 0 2364 61 0 7 chr20 51733256 51733553 -14934452 + AluY SINE Alu 1 295 -16 2281 95 0 0 chr20 51733675 51733969 -14934036 + AluSc SINE Alu 1 294 -15 2108 128 3 0 chr20 51734183 51734487 -14933518 - AluSx SINE Alu -6 306 2 985 161 12 0 chr20 51734538 51734700 -14933305 - FRAM SINE Alu -20 156 1 1868 137 10 0 chr20 51734713 51735006 -14932999 + AluSq SINE Alu 1 296 -17 239 233 0 0 chr20 51735008 51735051 -14932954 - AluJ/monomer SINE Alu -85 48 6 1691 125 56 31 chr20 51735066 51735353 -14932652 - AluJb SINE Alu -18 294 1 701 190 62 62 chr20 51735371 51735566 -14932439 + AluJb SINE Alu 118 312 0 2110 103 0 0 chr20 51735798 51736106 -14931899 - AluSg SINE Alu 0 308 1 1860 131 17 0 chr20 51736108 51736399 -14931606 - AluSx SINE Alu -16 296 1 1888 149 17 0 chr20 51738842 51739144 -14928861 - AluSx SINE Alu -5 307 1 716 156 0 64 chr20 51739456 51739597 -14928408 + MER20 DNA MER1_type 2 133 -86 2038 115 10 0 chr20 51739718 51740013 -14927992 - AluSx SINE Alu -14 298 1 1889 136 7 10 chr20 51741123 51741417 -14926588 - AluSx SINE Alu -19 293 1 2102 68 41 17 chr20 51742056 51742350 -14925655 - AluY SINE Alu -10 301 1 1568 99 134 15 chr20 51743645 51743907 -14924098 - AluSc SINE Alu -16 293 1 2066 102 24 0 chr20 51743939 51744234 -14923771 + AluSp SINE Alu 1 302 -11 24 0 0 0 chr20 51745037 51745061 -14922944 + AT_rich Low_complexity Low_complexity 1 24 0 1231 143 0 10 chr20 51745200 51745396 -14922609 + AluSx SINE Alu 1 194 -118 2301 65 10 0 chr20 51745420 51745714 -14922291 + AluY SINE Alu 2 298 -13 1563 107 13 0 chr20 51745714 51745945 -14922060 + AluSc SINE Alu 71 306 -3 1010 136 6 0 chr20 51745945 51746107 -14921898 + AluSg/x SINE Alu 134 296 -16 1919 113 0 30 chr20 51746252 51746552 -14921453 - AluSx SINE Alu -21 291 1 2536 20 7 0 chr20 51746562 51746856 -14921149 - AluY SINE Alu -14 297 2 2350 57 3 3 chr20 51747676 51747973 -14920032 - AluSg SINE Alu -13 297 1 888 117 0 36 chr20 51748017 51748154 -14919851 + FLAM_C SINE Alu 1 132 -1 2224 87 0 3 chr20 51748160 51748458 -14919547 + AluY SINE Alu 1 297 -14 1558 197 14 0 chr20 51748662 51748956 -14919049 + AluJo SINE Alu 1 298 -14 1985 118 0 53 chr20 51749097 51749231 -14918774 + AluSq SINE Alu 3 142 -171 2010 135 3 6 chr20 51749231 51749543 -14918462 + AluSx SINE Alu 1 311 -1 1985 118 0 53 chr20 51749543 51749555 -14918450 + AluSq SINE Alu 142 153 -160 2181 82 0 26 chr20 51749555 51749861 -14918144 + AluY SINE Alu 1 298 -13 1985 118 0 53 chr20 51749861 51750036 -14917969 + AluSq SINE Alu 153 308 -5 2016 133 0 0 chr20 51751080 51751382 -14916623 - AluSx SINE Alu -5 307 6 246 280 80 48 chr20 51751726 51751851 -14916154 + MIR SINE MIR 3 131 -131 185 200 25 0 chr20 51752043 51752083 -14915922 + MIR SINE MIR 222 262 0 2019 129 6 3 chr20 51752246 51752557 -14915448 + AluSx SINE Alu 1 312 0 2339 70 0 3 chr20 51753321 51753619 -14914386 + AluY SINE Alu 2 298 -13 551 139 0 0 chr20 51754157 51754236 -14913769 + FLAM_A SINE Alu 20 98 -44 1932 144 163 90 chr20 51754505 51754696 -14913309 - MER6A DNA MER2_type -260 605 429 1963 103 0 4 chr20 51754696 51754977 -14913028 - AluSq SINE Alu -16 297 18 1932 144 163 90 chr20 51754977 51755349 -14912656 - MER6A DNA MER2_type -436 429 1 21 0 0 0 chr20 51755712 51755733 -14912272 + AT_rich Low_complexity Low_complexity 1 21 0 347 227 57 78 chr20 51756357 51756498 -14911507 + L1MC5 LINE L1 7747 7884 -77 1102 97 332 4 chr20 51756637 51756863 -14911142 - AluSg SINE Alu 0 300 1 1707 107 8 0 chr20 51756870 51757122 -14910883 + AluSg SINE Alu 42 295 -15 405 215 224 34 chr20 51758278 51758483 -14909522 - MIR SINE MIR -14 248 5 21 57 0 0 chr20 51758537 51758572 -14909433 + GC_rich Low_complexity Low_complexity 1 35 0 30 59 0 0 chr20 51758824 51758875 -14909130 + GC_rich Low_complexity Low_complexity 1 51 0 216 307 0 55 chr20 51758932 51759059 -14908946 + G-rich Low_complexity Low_complexity 3 122 0 249 200 17 0 chr20 51759147 51759207 -14908798 + C-rich Low_complexity Low_complexity 1 61 0 270 209 11 55 chr20 51759404 51759495 -14908510 + CT-rich Low_complexity Low_complexity 4 90 0 532 273 55 12 chr20 51759506 51759671 -14908334 - L2 LINE L2 -1 3312 3141 2215 68 3 10 chr20 51759684 51759995 -14908010 + AluY SINE Alu 3 311 0 2195 78 51 0 chr20 51760116 51760409 -14907596 + AluSx SINE Alu 1 308 -4 1523 154 6 103 chr20 51761049 51761380 -14906625 - AluJb SINE Alu -13 299 1 538 128 0 0 chr20 51761669 51761747 -14906258 - AluS SINE Alu -12 299 222 2127 88 3 7 chr20 51761777 51762074 -14905931 - AluSx SINE Alu 0 312 17 291 295 37 74 chr20 51762107 51762297 -14905708 + L2 LINE L2 3124 3306 -7 1976 130 0 0 chr20 51762532 51762825 -14905180 + AluSx SINE Alu 1 293 -19 2415 72 0 0 chr20 51762828 51763135 -14904870 + AluY SINE Alu 1 307 -4 227 237 59 81 chr20 51763157 51763343 -14904662 + L1MC4a LINE L1 4378 4559 -1587 1151 139 30 25 chr20 51763362 51763564 -14904441 + AluJb SINE Alu 86 288 -24 2114 114 0 0 chr20 51763858 51764155 -14903850 + AluSx SINE Alu 1 297 -15 1807 116 3 24 chr20 51764155 51764447 -14903558 + AluSc SINE Alu 1 286 -23 2059 83 13 7 chr20 51764449 51764749 -14903256 + AluY SINE Alu 1 302 -9 2224 96 3 3 chr20 51764910 51765222 -14902783 + AluSp SINE Alu 1 312 -1 630 175 25 150 chr20 51765241 51765355 -14902650 + FAM SINE Alu 1 81 -240 1902 123 0 4 chr20 51765355 51765632 -14902373 - AluSx SINE Alu -26 286 11 630 175 25 150 chr20 51765632 51765717 -14902288 + FAM SINE Alu 81 175 -10 508 306 112 58 chr20 51765730 51766019 -14901986 + L1MC4a LINE L1 5024 5335 -811 2413 56 7 3 chr20 51766019 51766325 -14901680 + AluY SINE Alu 1 307 -4 508 306 112 58 chr20 51766325 51766365 -14901640 + L1MC4a LINE L1 5335 5371 -775 2200 98 19 0 chr20 51766385 51766692 -14901313 + AluSp SINE Alu 1 313 0 852 125 0 109 chr20 51766732 51766916 -14901089 + AluSg/x SINE Alu 146 309 -1 2442 42 7 3 chr20 51766918 51767227 -14900778 + AluY SINE Alu 1 310 -1 1370 136 95 37 chr20 51767268 51767562 -14900443 + AluSx SINE Alu 1 311 -1 342 218 11 138 chr20 51767580 51767641 -14900364 + L1MC4a LINE L1 5688 5755 -2053 1986 96 11 4 chr20 51767641 51767948 -14900057 + AluSx SINE Alu 4 312 0 342 218 11 138 chr20 51767948 51768059 -14899946 + L1MC4a LINE L1 5755 5839 -1969 * 691 142 113 173 chr20 51768045 51768123 -14899882 + L1MC3 LINE L1 5176 5257 -909 183 80 0 0 chr20 51768123 51768148 -14899857 + (CATATA)n Simple_repeat Simple_repeat 4 28 0 1984 122 3 3 chr20 51768154 51768465 -14899540 - AluSx SINE Alu -1 311 1 1374 191 20 13 chr20 51768470 51768773 -14899232 - AluJo SINE Alu -7 305 1 691 142 113 173 chr20 51768773 51768997 -14899008 + L1MC3 LINE L1 5266 5502 -664 1808 140 27 3 chr20 51768997 51769290 -14898715 + AluSg SINE Alu 1 300 -10 691 142 113 173 chr20 51769290 51769315 -14898690 + L1MC3 LINE L1 5502 5435 -731 1364 157 21 105 chr20 51769315 51769445 -14898560 + AluYb8 SINE Alu 5 144 -174 1904 120 0 18 chr20 51769445 51769729 -14898276 + AluY SINE Alu 1 279 -32 1364 157 21 105 chr20 51769729 51769923 -14898082 + AluYb8 SINE Alu 144 302 -16 691 142 113 173 chr20 51769923 51769965 -14898040 + L1MC3 LINE L1 5434 5477 -689 2345 62 0 0 chr20 51770000 51770292 -14897713 - AluSc SINE Alu -17 292 1 22 35 0 0 chr20 51770295 51770324 -14897681 + AT_rich Low_complexity Low_complexity 1 29 0 2226 105 0 3 chr20 51770324 51770637 -14897368 - AluSx SINE Alu 0 312 1 806 181 0 0 chr20 51770639 51770772 -14897233 - AluJo SINE Alu -178 134 2 2533 216 68 58 chr20 51770772 51771080 -14896925 + L1MC3 LINE L1 5519 5823 -1962 2385 56 0 10 chr20 51771080 51771386 -14896619 + AluY SINE Alu 1 303 -8 2533 216 68 58 chr20 51771386 51771549 -14896456 + L1MC3 LINE L1 5823 5983 -1802 1724 122 3 38 chr20 51771549 51771837 -14896168 + AluJb SINE Alu 34 311 -1 2533 216 68 58 chr20 51771837 51772205 -14895800 + L1MC3 LINE L1 5983 6367 -1418 2073 122 0 3 chr20 51772222 51772525 -14895480 + AluSx SINE Alu 1 302 -10 714 196 32 21 chr20 51772534 51772702 -14895303 + L1M4 LINE L1 2912 3084 -3062 2533 58 0 0 chr20 51772702 51773013 -14894992 + AluY SINE Alu 1 311 0 714 196 32 21 chr20 51773013 51773033 -14894972 + L1M4 LINE L1 3084 3102 -3044 1967 118 3 7 chr20 51773046 51773333 -14894672 + AluSx SINE Alu 3 288 -24 207 0 0 0 chr20 51773338 51773361 -14894644 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 714 196 0 36 chr20 51773364 51773502 -14894503 + FLAM_C SINE Alu 1 133 0 2195 113 3 13 chr20 51773520 51773830 -14894175 + AluSx SINE Alu 1 307 -5 401 251 57 34 chr20 51773832 51773910 -14894095 + L1M4 LINE L1 3084 3159 -2987 1550 160 0 0 chr20 51773910 51774141 -14893864 + AluSx SINE Alu 5 235 -77 401 251 57 34 chr20 51774141 51774237 -14893768 + L1M4 LINE L1 3159 3262 -2884 2242 109 7 0 chr20 51774442 51774746 -14893259 - AluSg SINE Alu -4 306 1 852 201 16 11 chr20 51774875 51775064 -14892941 - AluSg/x SINE Alu -2 310 121 503 313 15 19 chr20 51775066 51775334 -14892671 - L1ME3A LINE L1 -225 5945 5679 453 36 0 0 chr20 51775356 51775411 -14892594 + (TA)n Simple_repeat Simple_repeat 1 55 0 2348 93 20 3 chr20 51775411 51775713 -14892292 - AluSx SINE Alu -5 307 1 2442 87 0 0 chr20 51776127 51776427 -14891578 - AluSg SINE Alu -10 300 1 2394 90 3 7 chr20 51776436 51776737 -14891268 - AluSp SINE Alu -13 300 1 2332 88 3 35 chr20 51776739 51777057 -14890948 - AluSx SINE Alu -4 308 1 343 274 0 38 chr20 51777065 51777171 -14890834 - HAL1 LINE L1 -2 2505 2404 555 157 0 10 chr20 51777178 51777280 -14890725 - AluSg/x SINE Alu -5 305 205 870 170 88 0 chr20 51777280 51777427 -14890578 - AluJb SINE Alu -19 293 134 33 18 0 36 chr20 51777446 51777483 -14890522 + AT_rich Low_complexity Low_complexity 1 38 -15 297 0 0 0 chr20 51777483 51777516 -14890489 + (TA)n Simple_repeat Simple_repeat 2 34 0 2381 100 0 0 chr20 51777516 51777817 -14890188 - AluSc SINE Alu -8 301 1 33 18 0 36 chr20 51777817 51777833 -14890172 + AT_rich Low_complexity Low_complexity 36 53 0 1063 161 18 12 chr20 51777833 51778001 -14890004 + FRAM SINE Alu 1 161 -15 2093 125 0 19 chr20 51778270 51778583 -14889422 - AluSg SINE Alu -3 307 1 2247 98 0 54 chr20 51778644 51778814 -14889191 - AluSx SINE Alu -12 300 122 243 0 0 0 chr20 51778814 51778841 -14889164 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2166 107 0 0 chr20 51778841 51779121 -14888884 - AluSc SINE Alu -29 280 1 2247 98 0 54 chr20 51779121 51779265 -14888740 - AluSx SINE Alu -188 124 2 549 115 0 172 chr20 51779308 51779386 -14888619 + FLAM_C SINE Alu 37 127 -185 2428 70 0 10 chr20 51779386 51779685 -14888320 - AluY SINE Alu -15 296 1 2057 148 3 0 chr20 51779694 51779998 -14888007 - AluSx SINE Alu -7 305 1 549 115 0 172 chr20 51779998 51780031 -14887974 + FLAM_C SINE Alu 100 137 -175 180 0 0 0 chr20 51780202 51780222 -14887783 + (A)n Simple_repeat Simple_repeat 1 20 0 1913 153 7 0 chr20 51780226 51780513 -14887492 + AluSq SINE Alu 1 289 -24 2261 112 0 10 chr20 51780530 51780842 -14887163 + AluSc SINE Alu 1 309 0 667 212 187 0 chr20 51780935 51781138 -14886867 - HAL1 LINE L1 -710 1797 1557 183 239 0 0 chr20 51781212 51781258 -14886747 + CT-rich Low_complexity Low_complexity 3 48 0 582 140 4 109 chr20 51781533 51781562 -14886443 - L1ME LINE L1 -739 5431 5401 3621 159 6 43 chr20 51781562 51782132 -14885873 - L1MB5 LINE L1 -8 6166 5625 897 155 5 103 chr20 51782132 51782269 -14885736 - FAM SINE Alu -136 175 61 2081 148 0 0 chr20 51782269 51782567 -14885438 - AluSx SINE Alu -10 302 5 897 155 5 103 chr20 51782567 51782623 -14885382 - FAM SINE Alu -250 61 1 3621 159 6 43 chr20 51782623 51782752 -14885253 - L1MB5 LINE L1 -549 5625 5493 2031 148 3 3 chr20 51782753 51783050 -14884955 - AluJb SINE Alu -13 299 3 582 140 4 109 chr20 51783050 51783112 -14884893 - L1ME LINE L1 -769 5401 5334 741 146 62 0 chr20 51783112 51783256 -14884749 - L1MA9 LINE L1 0 6312 6160 582 140 4 109 chr20 51783256 51783351 -14884654 - L1ME LINE L1 -836 5334 5258 2133 99 46 3 chr20 51783379 51783661 -14884344 - AluSp SINE Alu -19 294 1 1359 153 0 38 chr20 51783757 51783992 -14884013 - AluJo SINE Alu 0 312 87 2266 100 3 0 chr20 51784002 51784291 -14883714 - AluSg SINE Alu -20 290 1 183 243 0 0 chr20 51784482 51784519 -14883486 - MIR SINE MIR -70 192 156 1969 133 7 4 chr20 51784694 51784973 -14883032 + AluSx SINE Alu 1 280 -32 189 0 0 0 chr20 51784973 51784994 -14883011 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 2330 123 0 0 chr20 51784999 51785309 -14882696 + AluSx SINE Alu 1 310 -2 376 235 176 20 chr20 51785340 51785493 -14882512 + MIR SINE MIR 32 208 -54 598 122 28 9 chr20 51785554 51785661 -14882344 - MLT1A1 LTR MaLR -256 109 1 570 213 79 74 chr20 51785674 51785890 -14882115 - MLT1J LTR MaLR -3 508 292 340 270 224 25 chr20 51785914 51786110 -14881895 + L2 LINE L2 2911 3145 -168 469 215 56 19 chr20 51786119 51786226 -14881779 + MIR SINE MIR 60 170 -92 220 294 15 0 chr20 51786291 51786359 -14881646 + L2 LINE L2 3244 3312 -1 2246 132 0 3 chr20 51786489 51786844 -14881161 + AluSx SINE Alu 2 355 0 738 189 0 8 chr20 51786872 51786999 -14881006 + FLAM_A SINE Alu 1 126 -7 2176 120 3 19 chr20 51787007 51787324 -14880681 + AluSx SINE Alu 1 312 0 969 217 198 24 chr20 51787770 51788189 -14879816 - LTR50 LTR ERVL -303 492 1 348 247 49 0 chr20 51788342 51788423 -14879582 - MIR SINE MIR -158 104 20 30 0 0 0 chr20 51788433 51788463 -14879542 + AT_rich Low_complexity Low_complexity 1 30 0 1245 131 0 0 chr20 51788464 51788640 -14879365 + AluSg/x SINE Alu 137 312 0 2392 82 0 3 chr20 51788645 51788938 -14879067 - AluSp SINE Alu -21 292 1 2640 34 0 3 chr20 51788993 51789288 -14878717 - AluY SINE Alu -17 294 1 246 32 0 0 chr20 51789305 51789336 -14878669 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 605 204 9 0 chr20 51789340 51789453 -14878552 - FLAM_C SINE Alu -19 114 1 1922 106 99 0 chr20 51789523 51789807 -14878198 + AluJb SINE Alu 1 312 0 257 258 21 31 chr20 51789807 51789904 -14878101 - L1ME4a LINE L1 -83 6038 5943 281 356 44 37 chr20 51790659 51790794 -14877211 - L2 LINE L2 -5 3308 3173 342 334 196 26 chr20 51790849 51791277 -14876728 + L2 LINE L2 2247 2747 -567 221 0 35 0 chr20 51791588 51791617 -14876388 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 209 295 48 19 chr20 51791628 51791733 -14876272 + L2 LINE L2 2784 2891 -423 2348 80 0 0 chr20 51791734 51792020 -14875985 - AluSg SINE Alu -21 289 4 884 125 23 0 chr20 51792023 51792151 -14875854 - AluSg SINE Alu -179 131 1 1281 162 0 132 chr20 51792898 51793238 -14874767 - AluSc SINE Alu -14 295 1 2455 62 10 3 chr20 51793284 51793576 -14874429 - AluSp SINE Alu -19 294 1 23 0 0 0 chr20 51793576 51793599 -14874406 + AT_rich Low_complexity Low_complexity 1 23 0 1967 168 0 0 chr20 51794362 51794660 -14873345 + AluSx SINE Alu 1 298 -14 1591 188 11 4 chr20 51794660 51794937 -14873068 - AluJo SINE Alu -30 282 4 2266 123 0 3 chr20 51795118 51795426 -14872579 - AluSx SINE Alu -5 307 1 456 290 208 5 chr20 51795465 51795672 -14872333 + MIR SINE MIR 1 249 -13 687 188 60 0 chr20 51795986 51796103 -14871902 - FLAM_C SINE Alu -18 125 2 1571 247 80 21 chr20 51796130 51796217 -14871788 + L2 LINE L2 2609 2689 -624 2608 50 0 0 chr20 51796217 51796518 -14871487 - AluY SINE Alu -10 301 1 1571 247 80 21 chr20 51796518 51797086 -14870919 + L2 LINE L2 2689 3311 -2 765 139 0 76 chr20 51797421 51797565 -14870440 - FLAM_C SINE Alu 0 133 1 2883 7 0 0 chr20 51797621 51797925 -14870080 - AluYa5 SINE Alu -7 304 1 542 231 91 38 chr20 51797938 51798124 -14869881 - L1MC4a LINE L1 -1 7994 7631 2223 99 0 7 chr20 51798137 51798431 -14869574 - AluSx SINE Alu -19 293 2 2533 80 0 0 chr20 51798602 51798902 -14869103 - AluSg SINE Alu -10 300 1 2131 119 24 0 chr20 51798905 51799199 -14868806 - AluSq SINE Alu -12 301 1 958 92 0 0 chr20 51799203 51799323 -14868682 - AluSq/x SINE Alu -179 133 14 2528 43 23 10 chr20 51799794 51800093 -14867912 - AluY SINE Alu -8 303 1 2063 145 10 13 chr20 51800409 51800713 -14867292 - AluSx SINE Alu -9 303 1 237 297 93 17 chr20 51801327 51801445 -14866560 + MIR SINE MIR 48 174 -88 253 283 142 0 chr20 51801694 51801807 -14866198 + L2 LINE L2 2387 2515 -799 445 319 132 40 chr20 51801837 51802110 -14865895 + L2 LINE L2 2969 3266 -6 336 259 72 7 chr20 51802383 51802522 -14865483 + L1MC4 LINE L1 7275 7422 -620 1700 186 3 13 chr20 51802639 51802950 -14865055 - AluJo SINE Alu -4 308 1 351 143 0 0 chr20 51802950 51803006 -14864999 - AluJo SINE Alu -161 141 86 2186 87 56 7 chr20 51803111 51803245 -14864760 + AluSp SINE Alu 1 127 -186 2699 42 0 3 chr20 51803245 51803554 -14864451 + AluY SINE Alu 1 308 -3 2186 87 56 7 chr20 51803554 51803705 -14864300 + AluSp SINE Alu 127 300 -13 293 244 259 0 chr20 51803799 51803934 -14864071 + L1MC4 LINE L1 7793 7962 -80 563 285 85 49 chr20 51804695 51805027 -14862978 + L2 LINE L2 2546 2909 -404 2207 130 0 0 chr20 51805027 51805327 -14862678 - AluSx SINE Alu -12 300 1 563 285 85 49 chr20 51805327 51805477 -14862528 + L2 LINE L2 2909 3052 -261 256 239 28 0 chr20 51806216 51806287 -14861718 - MIR SINE MIR -12 250 178 2668 40 0 0 chr20 51806510 51806806 -14861199 - AluY SINE Alu -15 296 1 446 264 49 21 chr20 51807330 51807474 -14860531 + MIR SINE MIR 8 155 -107 476 171 0 23 chr20 51807688 51807776 -14860229 - AluJ/FLAM SINE Alu -225 87 2 24 53 0 0 chr20 51807777 51807815 -14860190 + AT_rich Low_complexity Low_complexity 1 38 0 1803 164 20 3 chr20 51807817 51808110 -14859895 + AluJo SINE Alu 3 300 -12 564 251 266 25 chr20 51808257 51808659 -14859346 - L2 LINE L2 -1 3312 2814 2307 101 0 0 chr20 51808774 51809072 -14858933 - AluSc SINE Alu -3 306 9 1735 163 10 36 chr20 51809073 51809231 -14858774 - AluJo SINE Alu -19 293 145 2099 127 3 10 chr20 51809231 51809530 -14858475 - AluSx SINE Alu -15 297 1 1735 163 10 36 chr20 51809530 51809672 -14858333 - AluJo SINE Alu -167 145 1 2269 177 37 77 chr20 51810111 51810189 -14857816 + L1MB4 LINE L1 5582 5662 -518 1695 151 131 0 chr20 51810189 51810487 -14857518 - MER1B DNA MER1_type 0 337 1 2269 177 37 77 chr20 51810487 51811031 -14856974 + L1MB4 LINE L1 5662 6179 -1 359 305 121 72 chr20 51811034 51811192 -14856813 - L1MC4a LINE L1 -1831 5977 5801 2403 87 0 0 chr20 51811192 51811490 -14856515 - AluY SINE Alu -13 298 1 359 305 121 72 chr20 51811490 51811580 -14856425 - L1MC4a LINE L1 -2007 5801 5717 1207 179 5 5 chr20 51811580 51811781 -14856224 + AluJb SINE Alu 85 285 -27 615 208 27 55 chr20 51811814 51811997 -14856008 - L1MC4a LINE L1 -2079 5729 5552 315 292 35 0 chr20 51812108 51812221 -14855784 + HAL1 LINE L1 2245 2361 -146 2190 123 13 0 chr20 51812232 51812532 -14855473 - AluSx SINE Alu -8 304 1 2435 79 3 3 chr20 51813478 51813782 -14854223 - AluSc SINE Alu -4 305 2 279 160 0 0 chr20 51814994 51815044 -14852961 + FAM SINE Alu 125 174 -1 309 299 157 0 chr20 51815160 51815307 -14852698 - MIR SINE MIR -19 243 74 2018 116 4 0 chr20 51815453 51815721 -14852284 - AluSq SINE Alu -44 269 1 1747 160 23 20 chr20 51816075 51816381 -14851624 - AluJb SINE Alu -5 307 1 2472 71 0 3 chr20 51817636 51817930 -14850075 - AluSg SINE Alu -17 293 1 2309 114 0 10 chr20 51820736 51821042 -14846963 + AluSq SINE Alu 1 303 -10 237 320 100 0 chr20 51821137 51821237 -14846768 - MIR SINE MIR -41 221 112 244 222 0 42 chr20 51821238 51821310 -14846695 - FLAM_A SINE Alu 0 133 65 2211 118 3 10 chr20 51821318 51821615 -14846390 - AluSq SINE Alu -18 295 1 1241 108 0 0 chr20 51821615 51821772 -14846233 - AluSc SINE Alu -152 157 1 237 241 52 35 chr20 51821784 51821842 -14846163 - MIR SINE MIR -105 103 45 2129 117 7 17 chr20 51821904 51822204 -14845801 - AluSx SINE Alu -15 297 1 689 205 8 0 chr20 51822479 51822596 -14845409 + AluJo/FLAM SINE Alu 1 118 -184 2004 120 40 10 chr20 51822596 51822895 -14845110 - AluSx SINE Alu -4 308 1 2434 95 3 0 chr20 51822899 51823205 -14844800 - AluSx SINE Alu -5 307 1 23 0 0 0 chr20 51823378 51823401 -14844604 + AT_rich Low_complexity Low_complexity 1 23 0 248 229 0 66 chr20 51823657 51823718 -14844287 - L2 LINE L2 0 3313 3257 1009 307 44 41 chr20 51823882 51824318 -14843687 - L2 LINE L2 -413 2901 2465 2299 124 7 0 chr20 51824782 51825089 -14842916 - AluSx SINE Alu -2 310 2 182 279 123 33 chr20 51825680 51825802 -14842203 + L2 LINE L2 2625 2757 -557 2174 100 3 0 chr20 51825806 51826106 -14841899 - AluY SINE Alu -10 301 1 822 146 8 8 chr20 51826117 51826247 -14841758 - FLAM_C SINE Alu 0 133 4 287 255 122 31 chr20 51826386 51826484 -14841521 + L2 LINE L2 3197 3303 -10 905 231 39 21 chr20 51826859 51827093 -14840912 + MIR SINE MIR 9 246 -16 229 253 81 40 chr20 51827108 51827207 -14840798 + L2 LINE L2 3173 3275 -38 204 211 0 0 chr20 51828387 51828425 -14839580 + CT-rich Low_complexity Low_complexity 3 40 0 2127 87 0 39 chr20 51828466 51828775 -14839230 - AluSg SINE Alu -13 297 1 2254 62 35 0 chr20 51828862 51829151 -14838854 - AluSp SINE Alu -14 299 1 2049 119 7 0 chr20 51829289 51829582 -14838423 + AluSx SINE Alu 1 295 -17 1902 114 7 0 chr20 51829585 51829858 -14838147 + AluSx SINE Alu 1 275 -37 319 55 18 18 chr20 51829875 51829930 -14838075 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 1539 166 20 24 chr20 51830197 51830492 -14837513 - AluJo SINE Alu -18 294 1 599 269 70 17 chr20 51830494 51830895 -14837110 - L1ME1 LINE L1 -280 5886 5325 1199 92 0 29 chr20 51830897 51831070 -14836935 + AluSq SINE Alu 133 300 -13 1474 183 24 17 chr20 51831427 51831562 -14836443 + AluJo SINE Alu 5 138 -174 2008 132 0 3 chr20 51831562 51831851 -14836154 + AluSx SINE Alu 1 288 -24 1474 183 24 17 chr20 51831851 51832005 -14836000 + AluJo SINE Alu 138 296 -16 3034 71 51 29 chr20 51832033 51832412 -14835593 + L1PA13 LINE L1 5704 6096 -67 2362 47 7 10 chr20 51832412 51832711 -14835294 - AluY SINE Alu -13 298 1 3034 71 51 29 chr20 51832711 51832780 -14835225 + L1PA13 LINE L1 6096 6162 -1 464 238 117 95 chr20 51832882 51832896 -14835109 + MER102a DNA MER1_type 92 104 -1313 1983 125 30 7 chr20 51832896 51833201 -14834804 + AluSx SINE Alu 1 312 0 464 238 117 95 chr20 51833201 51833417 -14834588 + MER102a DNA MER1_type 104 327 -3 257 333 0 0 chr20 51833474 51833558 -14834447 - MIR SINE MIR -53 209 126 293 200 31 0 chr20 51833757 51833822 -14834183 - MER116 DNA Mariner -13 67 1 400 240 215 0 chr20 51833826 51833947 -14834058 - MIR SINE MIR -108 154 8 1025 149 0 0 chr20 51834431 51834585 -14833420 + AluSq SINE Alu 1 154 -159 771 134 296 6 chr20 51834585 51834705 -14833300 - MER46A DNA MER2_type -2499 232 148 2256 86 0 0 chr20 51834705 51834996 -14833009 + AluSg SINE Alu 1 291 -19 771 134 296 6 chr20 51834996 51835054 -14832951 - MER46A DNA MER2_type -2583 148 2 526 232 27 0 chr20 51835086 51835198 -14832807 + MLT1J LTR MaLR 1 115 -396 390 294 131 13 chr20 51835292 51835445 -14832560 + MLT1J LTR MaLR 292 462 -49 736 302 60 8 chr20 51835803 51836051 -14831954 + MIR SINE MIR 2 262 0 272 322 56 0 chr20 51836049 51836139 -14831866 - L2 LINE L2 -5 3267 3173 * 22 35 0 0 chr20 51836466 51836495 -14831510 + AT_rich Low_complexity Low_complexity 1 29 0 349 242 90 90 chr20 51836527 51836839 -14831166 - L2 LINE L2 -225 3047 2742 22 0 0 0 chr20 51837102 51837124 -14830881 + AT_rich Low_complexity Low_complexity 1 22 0 342 239 100 110 chr20 51837207 51837516 -14830489 - L1MC4a LINE L1 -1782 6026 5721 2066 107 0 10 chr20 51837661 51837959 -14830046 - AluSc SINE Alu -14 295 1 570 204 191 0 chr20 51838080 51838227 -14829778 - FAM SINE Alu 0 175 1 22 0 0 0 chr20 51838241 51838263 -14829742 + AT_rich Low_complexity Low_complexity 1 22 0 602 264 28 125 chr20 51838476 51838639 -14829366 + MIR SINE MIR 3 128 -134 2281 77 0 7 chr20 51838639 51838938 -14829067 - AluY SINE Alu -14 297 1 602 264 28 125 chr20 51838938 51839062 -14828943 + MIR SINE MIR 128 262 0 22 0 0 0 chr20 51839062 51839084 -14828921 + AT_rich Low_complexity Low_complexity 1 22 0 5773 102 27 49 chr20 51839256 51840163 -14827842 + L1PA15 LINE L1 5113 6009 -156 2105 114 3 0 chr20 51840163 51840453 -14827552 + AluSx SINE Alu 1 291 -21 5773 102 27 49 chr20 51840453 51840605 -14827400 + L1PA15 LINE L1 6009 6163 -2 554 304 203 0 chr20 51842816 51842944 -14825061 + MIR SINE MIR 2 103 -159 2047 100 3 30 chr20 51842944 51843245 -14824760 - AluSg SINE Alu -15 295 3 554 304 203 0 chr20 51843245 51843333 -14824672 + MIR SINE MIR 103 262 0 2104 111 0 0 chr20 51843889 51844195 -14823810 - AluY SINE Alu -5 306 1 1958 141 0 0 chr20 51844411 51844708 -14823297 + AluJb SINE Alu 1 297 -15 572 202 143 25 chr20 51844912 51845115 -14822890 + MER33 DNA MER1_type 1 227 -97 2133 95 0 3 chr20 51845239 51845551 -14822454 + AluSx SINE Alu 1 311 0 247 172 35 58 chr20 51845551 51845604 -14822401 + MER33 DNA MER1_type 232 284 -2301 2541 45 0 3 chr20 51845604 51845916 -14822089 + AluY SINE Alu 1 311 0 247 172 35 58 chr20 51845916 51845949 -14822056 + MER33 DNA MER1_type 284 316 -8 1363 159 6 84 chr20 51846099 51846420 -14821585 - AluJo SINE Alu -16 296 1 222 241 0 35 chr20 51847752 51847810 -14820195 + GA-rich Low_complexity Low_complexity 3 58 0 209 364 0 26 chr20 51848248 51848402 -14819603 + G-rich Low_complexity Low_complexity 2 151 0 2031 125 0 0 chr20 51850106 51850410 -14817595 + AluSx SINE Alu 1 304 -8 2150 154 182 11 chr20 51851874 51852340 -14815665 - LTR10B LTR ERV1 0 547 2 2718 194 31 13 chr20 51852344 51852891 -14815114 - HERVI LTR ERV1 -1 7784 7228 806 116 47 0 chr20 51852897 51853026 -14814979 - AluSg SINE Alu -13 299 165 732 118 0 0 chr20 51853031 51853133 -14814872 - AluSg SINE Alu -207 103 2 6178 237 71 30 chr20 51853133 51854883 -14813122 - HERVI LTR ERV1 -575 6074 4253 2360 243 17 4 chr20 51854893 51855351 -14812654 - HERVI LTR ERV1 -4495 3290 2823 2009 135 13 0 chr20 51855351 51855655 -14812350 - AluSg SINE Alu -2 308 1 2360 243 17 4 chr20 51855655 51855719 -14812286 - HERVI LTR ERV1 -4962 2823 2761 * 2690 241 60 35 chr20 51855714 51856549 -14811456 - HERVI LTR ERV1 -4361 2288 1433 3290 226 93 70 chr20 51856549 51857834 -14810171 - HERVI LTR ERV1 -5330 1319 5 1882 187 236 5 chr20 51857834 51858278 -14809727 - LTR10B LTR ERV1 0 547 1 813 206 93 16 chr20 51859174 51859368 -14808637 - AluJo SINE Alu -19 293 85 358 248 124 18 chr20 51859368 51859481 -14808524 - FAM SINE Alu -50 125 1 2145 99 10 0 chr20 51860510 51860804 -14807201 - AluY SINE Alu -14 297 1 1452 94 72 9 chr20 51860950 51861173 -14806832 - AluSx SINE Alu -75 237 1 359 239 204 9 chr20 51861308 51861421 -14806584 + MLT1F1 LTR MaLR 423 557 -10 1408 237 163 43 chr20 51861562 51862229 -14805776 + L2 LINE L2 2327 3064 -249 701 138 98 24 chr20 51862250 51862373 -14805632 - FLAM_C SINE Alu -1 132 1 200 211 0 18 chr20 51862405 51862462 -14805543 + (TA)n Simple_repeat Simple_repeat 1 56 0 207 270 32 0 chr20 51862466 51862529 -14805476 - MIR SINE MIR -173 89 25 1764 126 39 0 chr20 51862534 51862820 -14805185 - AluSx SINE Alu -15 297 1 270 170 21 0 chr20 51863192 51863239 -14804766 + MIR SINE MIR 99 146 -62 316 244 277 0 chr20 51863239 51863358 -14804647 - MIR SINE MIR -14 248 97 2225 104 0 0 chr20 51863478 51863787 -14804218 + AluSc SINE Alu 1 309 0 292 260 39 0 chr20 51863976 51864053 -14803952 + MIR SINE MIR 118 197 -65 8938 35 21 2 chr20 51864093 51865144 -14802861 + MER11C LTR ERVK 1 1071 0 828 241 98 38 chr20 51865165 51865429 -14802576 + L1ME1 LINE L1 5808 6096 -70 2135 102 0 26 chr20 51865429 51865734 -14802271 + AluSx SINE Alu 1 297 -15 828 241 98 38 chr20 51865734 51865785 -14802220 + L1ME1 LINE L1 6096 6142 -24 1634 152 4 4 chr20 51865789 51866059 -14801946 - AluJb SINE Alu -10 302 33 319 237 51 0 chr20 51866079 51866138 -14801867 + MIR SINE MIR 23 84 -178 299 224 150 82 chr20 51866614 51866761 -14801244 - Charlie8 DNA MER1_type -2308 109 1 2232 101 0 0 chr20 51866850 51867148 -14800857 - AluSc SINE Alu -11 298 1 347 245 145 24 chr20 51867852 51867870 -14800135 - MIR SINE MIR -34 228 214 1874 126 14 3 chr20 51867870 51868164 -14799841 - AluJo SINE Alu -5 307 11 347 245 145 24 chr20 51868164 51868350 -14799655 - MIR SINE MIR -48 214 4 354 196 39 20 chr20 51868946 51869048 -14798957 + L1MD3 LINE L1 7882 7985 -10 1862 64 4 0 chr20 51869246 51869480 -14798525 - AluSq SINE Alu -78 235 1 2007 136 7 0 chr20 51869569 51869877 -14798128 - AluSx SINE Alu -2 310 1 457 247 33 27 chr20 51870057 51870207 -14797798 - L1MC5 LINE L1 -519 7442 7292 1585 128 25 7 chr20 51870251 51870371 -14797634 - L1MA8 LINE L1 0 6291 6175 1807 109 25 4 chr20 51870371 51870647 -14797358 - AluSq SINE Alu -15 298 17 1585 128 25 7 chr20 51870647 51870807 -14797198 - L1MA8 LINE L1 -116 6175 6006 229 121 0 136 chr20 51870819 51870885 -14797120 - L1MA8 LINE L1 -349 5963 5907 1545 145 57 10 chr20 51870910 51871206 -14796799 - AluJb SINE Alu -2 310 1 1998 119 7 0 chr20 51871213 51871498 -14796507 - AluSx SINE Alu -25 287 1 1469 170 18 70 chr20 51871498 51871793 -14796212 - Charlie1a DNA MER1_type -2405 356 78 2226 81 7 0 chr20 51871793 51872091 -14795914 + AluY SINE Alu 1 300 -11 1469 170 18 70 chr20 51872091 51872124 -14795881 - Charlie1a DNA MER1_type -2683 78 45 332 244 171 0 chr20 51872150 51872232 -14795773 - L1MD3 LINE L1 -177 7818 7652 954 175 6 0 chr20 51872247 51872413 -14795592 - L1PA16 LINE L1 -11 6155 5989 2276 143 16 16 chr20 51872413 51872653 -14795352 - L1PA16 LINE L1 -99 6067 5825 2212 105 3 0 chr20 51872653 51872958 -14795047 - AluSx SINE Alu -4 308 3 2276 143 16 16 chr20 51872958 51873101 -14794904 - L1PA16 LINE L1 -340 5826 5684 713 202 0 0 chr20 51873151 51873275 -14794730 - AluSg/x SINE Alu -13 297 174 1945 134 0 3 chr20 51873295 51873586 -14794419 + AluSx SINE Alu 1 290 -22 587 285 47 10 chr20 51873591 51873784 -14794221 - L2 LINE L2 -204 3109 2910 2234 90 0 10 chr20 51874332 51874632 -14793373 - AluSq SINE Alu -16 297 1 351 230 69 0 chr20 51874812 51874899 -14793106 + MIR SINE MIR 72 164 -98 266 246 77 0 chr20 51874998 51875063 -14792942 + MLT1J LTR MaLR 111 180 -331 2149 112 13 0 chr20 51875150 51875453 -14792552 + AluSx SINE Alu 1 307 -5 215 132 53 0 chr20 51875550 51875588 -14792417 - MER5A DNA MER1_type -77 112 73 422 332 59 23 chr20 51875593 51875849 -14792156 - MLT1L LTR MaLR -97 518 254 527 254 25 8 chr20 51875940 51876058 -14791947 - MLT1L LTR MaLR -350 265 146 833 163 11 87 chr20 51876062 51876137 -14791868 + MER5A DNA MER1_type 8 87 -102 2402 103 0 0 chr20 51876137 51876437 -14791568 + AluSg SINE Alu 1 300 -10 833 163 11 87 chr20 51876437 51876545 -14791460 + MER5A DNA MER1_type 87 177 -12 224 283 0 0 chr20 51876547 51876593 -14791412 + MER5B DNA MER1_type 14 59 -119 613 190 4 129 chr20 51876596 51876654 -14791351 + L1ME3 LINE L1 5960 6024 -138 649 179 27 9 chr20 51876654 51876766 -14791239 - MER81 DNA DNA 0 114 1 613 190 4 129 chr20 51876766 51876871 -14791134 + L1ME3 LINE L1 6024 6088 -74 1793 136 7 61 chr20 51876871 51877181 -14790824 + AluJo SINE Alu 1 293 -19 613 190 4 129 chr20 51877181 51877248 -14790757 + L1ME3 LINE L1 6088 6162 0 462 336 0 0 chr20 51877248 51877367 -14790638 + MER5B DNA MER1_type 54 172 -6 379 173 27 0 chr20 51877401 51877476 -14790529 - MER5A DNA MER1_type -80 109 33 2133 104 7 4 chr20 51878434 51878733 -14789272 - AluSx SINE Alu 0 302 3 21 0 0 0 chr20 51878771 51878792 -14789213 + AT_rich Low_complexity Low_complexity 1 21 0 661 162 0 9 chr20 51878838 51878943 -14789062 - AluJb SINE Alu -207 105 2 2134 75 37 34 chr20 51878959 51879254 -14788751 - AluY SINE Alu -15 296 1 824 100 0 0 chr20 51879256 51879366 -14788639 - AluY SINE Alu -15 296 187 264 282 0 0 chr20 51879377 51879390 -14788615 - L1MA10 LINE L1 -88 6246 6234 3356 209 25 20 chr20 51879390 51880202 -14787803 - L1ME1 LINE L1 -92 6074 5259 829 250 78 23 chr20 51880369 51880625 -14787380 + MLT1K LTR MaLR 1 270 -318 471 261 124 29 chr20 51880647 51880888 -14787117 + L2 LINE L2 2990 3253 -60 273 157 0 57 chr20 51880906 51880976 -14787029 - L2 LINE L2 -777 2537 2472 530 246 32 16 chr20 51881030 51881156 -14786849 - MIR3 SINE MIR -75 133 6 1549 226 71 41 chr20 51881233 51881791 -14786214 - MLT1F1 LTR MaLR 0 567 2 2005 246 131 54 chr20 51881793 51882206 -14785799 - L2 LINE L2 -86 3227 2847 2140 98 63 0 chr20 51882206 51882491 -14785514 + AluSx SINE Alu 1 303 -9 2005 246 131 54 chr20 51882491 51882862 -14785143 - L2 LINE L2 -466 2847 2506 243 0 0 0 chr20 51882862 51882889 -14785116 + (TTTTA)n Simple_repeat Simple_repeat 3 29 0 2005 246 131 54 chr20 51882889 51882913 -14785092 - L2 LINE L2 -807 2506 2485 1829 171 3 7 chr20 51882913 51883222 -14784783 - AluJb SINE Alu 0 308 1 2005 246 131 54 chr20 51883222 51883543 -14784462 - L2 LINE L2 -828 2485 2013 581 279 49 37 chr20 51883551 51883912 -14784093 + MLT1G LTR MaLR 3 373 -217 1518 152 4 8 chr20 51884591 51884828 -14783177 + AluYa5 SINE Alu 1 236 -75 * 1948 136 0 0 chr20 51884826 51885131 -14782874 + AluJb SINE Alu 17 321 0 2128 120 3 3 chr20 51885400 51885691 -14782314 + AluSq SINE Alu 1 291 -22 907 249 94 63 chr20 51885706 51886008 -14781997 - L1MC4a LINE L1 -1885 5923 5595 1856 138 3 30 chr20 51886008 51886305 -14781700 - AluJo SINE Alu -1 311 23 907 249 94 63 chr20 51886305 51886544 -14781461 - L1MC4a LINE L1 -2213 5595 5365 445 255 21 21 chr20 51886544 51886689 -14781316 - HAL1 LINE L1 -118 2389 2245 2304 122 6 0 chr20 51886738 51887049 -14780956 - AluSq SINE Alu 0 313 1 232 210 0 0 chr20 51887050 51887112 -14780893 - MER113 DNA MER1_type? -325 196 135 6176 139 22 22 chr20 51887122 51888111 -14779894 - L1MC1 LINE L1 -2 6331 5344 2378 85 0 10 chr20 51888111 51888417 -14779588 - AluSq SINE Alu -10 303 1 6176 139 22 22 chr20 51888417 51888582 -14779423 - L1MC1 LINE L1 -989 5344 5180 366 229 38 15 chr20 51888592 51888723 -14779282 - MER113 DNA MER1_type? -387 134 1 970 144 28 6 chr20 51889929 51890109 -14777896 + MER53 DNA DNA 6 189 0 181 254 85 0 chr20 51890294 51890353 -14777652 - MIR SINE MIR -172 90 27 1035 149 7 0 chr20 51890546 51890700 -14777305 - FRAM SINE Alu -22 154 1 1783 158 11 11 chr20 51890919 51891234 -14776771 + AluJo SINE Alu 1 315 0 237 319 51 58 chr20 51891326 51891464 -14776541 - MIR SINE MIR -57 151 35 914 254 40 26 chr20 51892128 51892356 -14775649 - MIR SINE MIR 0 262 32 1823 147 12 64 chr20 51892476 51892866 -14775139 - AluJb SINE Alu 0 373 1 1574 246 78 34 chr20 51893229 51893766 -14774239 - MLT1K LTR MaLR -8 580 20 2278 98 30 0 chr20 51894112 51894408 -14773597 + AluSg SINE Alu 1 305 -5 478 261 35 0 chr20 51894732 51894847 -14773158 - L2 LINE L2 -18 3254 3136 309 373 53 13 chr20 51895027 51895177 -14772828 - L3 LINE CR1 -30 1547 1392 * 1232 265 58 57 chr20 51895172 51895881 -14772124 + L2 LINE L2 2595 3313 0 202 259 98 45 chr20 51895947 51896059 -14771946 + MIR SINE MIR 41 158 -104 193 306 141 0 chr20 51896392 51896477 -14771528 + MIR SINE MIR 164 260 -2 199 178 22 44 chr20 51896526 51896616 -14771389 + CT-rich Low_complexity Low_complexity 2 89 0 375 324 19 0 chr20 51896850 51896958 -14771047 + L2 LINE L2 3204 3313 0 2069 137 0 23 chr20 51897475 51897781 -14770224 - AluJb SINE Alu -13 299 1 414 196 0 54 chr20 51897789 51897881 -14770124 + MER82 DNA MER2_type 8 94 -559 248 315 97 24 chr20 51897910 51898075 -14769930 - MIR SINE MIR -74 188 12 983 236 10 0 chr20 51898116 51898324 -14769681 + MER82 DNA MER2_type 444 653 0 2091 113 0 3 chr20 51898403 51898712 -14769293 + AluSx SINE Alu 1 308 0 471 319 43 0 chr20 51898823 51898961 -14769044 - MIR SINE MIR -3 259 116 1223 208 112 3 chr20 51899654 51899957 -14768048 - MLT1K LTR MaLR 0 588 253 610 158 20 20 chr20 51899963 51900064 -14767941 + FRAM SINE Alu 8 108 -68 204 40 0 0 chr20 51900082 51900107 -14767898 + (CAAT)n Simple_repeat Simple_repeat 3 27 0 537 248 28 0 chr20 51900107 51900252 -14767753 - L2 LINE L2 -616 2698 2550 411 262 40 56 chr20 51900399 51900525 -14767480 - MIR SINE MIR -80 182 59 2069 106 0 3 chr20 51900594 51900876 -14767129 - AluSq SINE Alu -1 312 32 644 265 95 0 chr20 51901118 51901307 -14766698 - MIR SINE MIR -10 252 46 626 218 4 22 chr20 51901507 51901781 -14766224 + (TCCA)n Simple_repeat Simple_repeat 1 269 0 345 281 63 103 chr20 51901829 51902105 -14765900 - L1ME LINE L1 -5010 1109 844 1639 205 33 3 chr20 51902105 51902408 -14765597 - AluJb SINE Alu 0 312 1 345 281 63 103 chr20 51902408 51902433 -14765572 - L1ME LINE L1 -5275 844 820 2454 97 0 0 chr20 51902856 51903167 -14764838 - AluSx SINE Alu -1 311 1 1496 207 171 19 chr20 51903302 51903948 -14764057 - L2 LINE L2 0 3313 2574 302 214 0 0 chr20 51904031 51904087 -14763918 + L2 LINE L2 3256 3311 -2 974 251 56 84 chr20 51904136 51904602 -14763403 - MLT1K LTR MaLR -7 581 129 1598 104 0 0 chr20 51905031 51905242 -14762763 - AluSg/x SINE Alu -11 299 89 296 141 0 94 chr20 51905267 51905352 -14762653 + (T)n Simple_repeat Simple_repeat 1 77 0 2197 92 3 11 chr20 51905395 51905716 -14762289 + AluSp SINE Alu 2 320 0 372 241 104 0 chr20 51905753 51905874 -14762131 + MIR SINE MIR 40 171 -61 302 315 28 19 chr20 51905921 51906029 -14761976 - L2 LINE L2 -38 3275 3167 254 132 19 75 chr20 51906046 51906099 -14761906 + MIR SINE MIR 203 252 -10 468 344 15 5 chr20 51906611 51906806 -14761199 + MIR SINE MIR 52 248 -14 353 250 65 19 chr20 51906821 51906928 -14761077 - MIR3 SINE MIR -37 171 80 262 302 0 0 chr20 51907021 51907084 -14760921 - MIR SINE MIR 0 262 200 1472 212 92 42 chr20 51907087 51907309 -14760696 - L2 LINE L2 -1 3312 3103 2054 134 17 0 chr20 51907309 51907601 -14760404 - AluJb SINE Alu -15 297 1 1472 212 92 42 chr20 51907601 51907835 -14760170 - L2 LINE L2 -210 3103 2833 489 307 85 6 chr20 51907853 51908029 -14759976 - MIR SINE MIR -72 190 1 276 250 16 0 chr20 51908249 51908313 -14759692 + MIR SINE MIR 45 109 -99 197 138 0 0 chr20 51908485 51908514 -14759491 + L2 LINE L2 3267 3295 -18 206 216 43 158 chr20 51909258 51909379 -14758626 + MIR SINE MIR 140 245 -17 1980 135 20 0 chr20 51909379 51909682 -14758323 - AluJb SINE Alu -3 309 1 206 216 43 158 chr20 51909682 51909699 -14758306 + MIR SINE MIR 245 262 0 371 367 24 24 chr20 51909706 51909913 -14758092 - L1ME3A LINE L1 -1 6169 5963 374 308 7 14 chr20 51909996 51910142 -14757863 - L1ME3A LINE L1 -219 5951 5807 2110 147 0 0 chr20 51910161 51910453 -14757552 - AluSx SINE Alu -20 292 1 211 306 35 24 chr20 51910484 51910634 -14757371 - MIR SINE MIR -55 207 13 260 270 0 0 chr20 51910652 51910726 -14757279 - MIR SINE MIR -126 136 63 332 130 26 78 chr20 51910815 51910892 -14757113 - ORSL DNA AcHobo -34 241 169 378 0 0 0 chr20 51910901 51910943 -14757062 + (TAA)n Simple_repeat Simple_repeat 3 44 0 204 40 0 0 chr20 51911500 51911525 -14756480 + (TTCCC)n Simple_repeat Simple_repeat 5 29 0 646 186 17 12 chr20 51911525 51911536 -14756469 + CT-rich Low_complexity Low_complexity 1 10 -163 2194 119 7 3 chr20 51911536 51911839 -14756166 - AluSq SINE Alu -9 304 1 646 186 17 12 chr20 51911839 51911999 -14756006 + CT-rich Low_complexity Low_complexity 10 173 0 2059 139 0 0 chr20 51912008 51912288 -14755717 - AluSx SINE Alu -32 280 1 827 234 85 10 chr20 51912386 51912587 -14755418 - MIR SINE MIR 0 262 47 483 204 139 0 chr20 51912606 51912714 -14755291 + L2 LINE L2 3181 3303 -10 430 296 94 30 chr20 51912719 51912766 -14755239 + MER113 DNA MER1_type? 159 202 -319 2288 102 6 13 chr20 51912766 51913079 -14754926 + AluSx SINE Alu 1 311 -1 430 296 94 30 chr20 51913079 51913251 -14754754 + MER113 DNA MER1_type? 202 400 -121 1829 147 0 31 chr20 51913251 51913544 -14754461 + AluJb SINE Alu 23 306 -6 430 296 94 30 chr20 51913544 51913590 -14754415 + MER113 DNA MER1_type? 400 442 -79 1816 147 12 9 chr20 51913607 51913934 -14754071 - L1MB8 LINE L1 -25 6153 5826 466 291 95 6 chr20 51914583 51914741 -14753264 - MIR SINE MIR -74 188 17 1213 280 80 39 chr20 51914990 51915529 -14752476 - MLT1K LTR MaLR -2 586 26 502 204 139 0 chr20 51915591 51915699 -14752306 + MIR3 SINE MIR 65 187 -21 484 225 190 7 chr20 51916727 51916869 -14751136 + MIR SINE MIR 92 259 -3 1988 152 0 26 chr20 51916914 51917243 -14750762 - AluSx SINE Alu 0 312 1 942 189 35 0 chr20 51917294 51917463 -14750542 + MER45A DNA AcHobo 1 175 -3 430 208 195 19 chr20 51917528 51917682 -14750323 + Charlie8 DNA MER1_type 96 276 -2141 256 254 42 14 chr20 51917789 51917860 -14750145 + MIR SINE MIR 146 218 -44 837 289 120 23 chr20 51918096 51918445 -14749560 + L2 LINE L2 2889 3271 -1 284 325 159 19 chr20 51918459 51918616 -14749389 - MIR SINE MIR -68 194 16 2375 97 0 0 chr20 51918930 51919228 -14748777 - AluSx SINE Alu -14 298 1 414 0 0 0 chr20 51919287 51919333 -14748672 + (TG)n Simple_repeat Simple_repeat 2 47 0 806 263 26 0 chr20 51919348 51919538 -14748467 + MIR SINE MIR 34 228 -34 1431 210 48 68 chr20 51919652 51920066 -14747939 - L2 LINE L2 -2 3311 2906 359 233 78 10 chr20 51920198 51920301 -14747704 - MER91C DNA MER1_type 0 140 31 737 183 24 6 chr20 51920413 51920582 -14747423 + MER96B DNA MER1_type? 246 417 0 313 288 126 0 chr20 51920719 51920830 -14747175 - MIR SINE MIR -6 256 132 258 152 0 22 chr20 51920813 51920859 -14747146 - L2 LINE L2 -2 3270 3226 * 996 264 24 39 chr20 51920865 51921364 -14746641 + MLT1K LTR MaLR 8 544 -44 384 261 109 10 chr20 51921379 51921555 -14746450 - MIR SINE MIR -43 219 23 485 316 126 0 chr20 51921611 51921801 -14746204 + MIR SINE MIR 49 262 0 1546 84 48 81 chr20 51921834 51922107 -14745898 - L1PB1 LINE L1 0 6151 5888 1063 252 130 29 chr20 51922571 51923121 -14744884 + L2 LINE L2 2720 3310 -3 412 337 30 30 chr20 51923125 51923212 -14744793 - L2 LINE L2 -3 3269 3180 2266 126 0 0 chr20 51923212 51923522 -14744483 + AluSx SINE Alu 1 310 -2 412 337 30 30 chr20 51923522 51923603 -14744402 - L2 LINE L2 -91 3181 3101 * 573 230 211 10 chr20 51923571 51923775 -14744230 - MIR SINE MIR -1 261 17 537 103 26 0 chr20 51923875 51923953 -14744052 - MADE1 DNA Mariner 0 80 1 1886 142 16 30 chr20 51924555 51924858 -14743147 + AluJb SINE Alu 1 299 -13 362 279 60 66 chr20 51924990 51925151 -14742854 - MIR SINE MIR -48 214 54 1818 152 3 21 chr20 51925151 51925434 -14742571 + AluJb SINE Alu 3 280 -32 225 0 0 0 chr20 51925434 51925459 -14742546 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 362 279 60 66 chr20 51925459 51925479 -14742526 - MIR SINE MIR -206 56 33 337 316 43 8 chr20 51925591 51925708 -14742297 + MIR SINE MIR 5 125 -137 684 268 6 12 chr20 51925709 51925873 -14742132 + MLT1F LTR MaLR 1 163 -379 1465 127 5 14 chr20 51925895 51926108 -14741897 - AluJo SINE Alu -100 212 2 831 188 0 45 chr20 51926109 51926285 -14741720 + MLT1F LTR MaLR 375 542 0 299 211 58 77 chr20 51926381 51926485 -14741520 + MIR SINE MIR 160 261 -1 2338 82 3 3 chr20 51926548 51926839 -14741166 - AluSx SINE Alu -20 292 2 805 279 51 17 chr20 51926917 51927154 -14740851 - MIR SINE MIR -16 246 2 495 291 30 18 chr20 51927848 51928013 -14739992 + MER112 DNA MER1_type 8 174 -86 500 250 0 0 chr20 51928100 51928212 -14739793 + Charlie4 DNA MER1_type 40 151 -1810 1128 153 0 18 chr20 51928239 51928409 -14739596 + AluJo SINE Alu 127 293 -19 427 206 0 0 chr20 51928409 51928501 -14739504 + Charlie4 DNA MER1_type 185 276 -1685 971 165 6 0 chr20 51928512 51928670 -14739335 - FRAM SINE Alu -17 159 1 622 164 63 139 chr20 51928672 51928783 -14739222 + Charlie4 DNA MER1_type 1742 1827 -134 1734 154 6 65 chr20 51928783 51929107 -14738898 + AluJb SINE Alu 1 305 -7 622 164 63 139 chr20 51929107 51929233 -14738772 + Charlie4 DNA MER1_type 1827 1961 0 372 246 35 26 chr20 51929347 51929461 -14738544 - MIR SINE MIR -8 254 140 365 283 124 7 chr20 51929458 51929603 -14738402 + L2 LINE L2 3090 3251 -62 * 281 192 24 80 chr20 51929682 51929725 -14738280 + MER96B DNA MER1_type? 62 106 -311 2032 133 3 20 chr20 51929725 51929885 -14738120 - AluJb SINE Alu -19 293 139 2362 89 0 3 chr20 51929885 51930176 -14737829 - AluSc SINE Alu -19 290 1 2032 133 3 20 chr20 51930176 51930309 -14737696 - AluJb SINE Alu -173 139 5 281 192 24 80 chr20 51930309 51930390 -14737615 + MER96B DNA MER1_type? 106 179 -238 369 297 36 49 chr20 51930479 51930623 -14737382 - MIR SINE MIR -63 145 10 253 270 18 117 chr20 51930654 51930708 -14737297 + MIR SINE MIR 17 56 -152 2362 95 31 0 chr20 51930708 51931002 -14737003 + AluSx SINE Alu 1 303 -9 253 270 18 117 chr20 51931002 51931058 -14736947 + MIR SINE MIR 56 116 -92 1059 338 30 2 chr20 51931133 51931532 -14736473 - L2 LINE L2 -401 2913 2504 747 255 60 41 chr20 51931532 51931808 -14736197 + L1MC4a LINE L1 5687 5971 -1837 384 22 0 0 chr20 51931808 51931853 -14736152 + (TG)n Simple_repeat Simple_repeat 2 46 0 747 255 60 41 chr20 51931853 51931890 -14736115 + L1MC4a LINE L1 5971 6006 -1802 1109 170 35 0 chr20 51931982 51932182 -14735823 + MER20 DNA MER1_type 7 213 -6 2161 117 27 0 chr20 51932209 51932508 -14735497 + AluSx SINE Alu 1 307 -5 453 103 0 0 chr20 51932508 51932576 -14735429 + (GA)n Simple_repeat Simple_repeat 1 68 0 949 204 6 0 chr20 51932747 51932923 -14735082 + AluJo SINE Alu 124 300 -12 2737 166 90 8 chr20 51932996 51933519 -14734486 + MLT1F1 LTR MaLR 2 567 0 2018 152 0 7 chr20 51933522 51933824 -14734181 + AluSx SINE Alu 1 300 -12 590 132 167 18 chr20 51933988 51934102 -14733903 - AluSg SINE Alu -178 132 2 815 234 35 77 chr20 51934104 51934365 -14733640 + MER102b DNA MER1_type 91 340 -1 312 27 0 0 chr20 51934805 51934842 -14733163 + (TG)n Simple_repeat Simple_repeat 2 38 0 280 247 0 35 chr20 51935579 51935664 -14732341 + (CTCA)n Simple_repeat Simple_repeat 4 85 0 396 0 0 0 chr20 51936971 51937015 -14730990 + (CA)n Simple_repeat Simple_repeat 2 45 0 451 289 43 58 chr20 51937029 51937237 -14730768 - L3 LINE CR1 -28 1549 1345 2203 122 6 10 chr20 51938251 51938563 -14729442 + AluSx SINE Alu 1 311 -1 21 36 0 0 chr20 51939243 51939271 -14728734 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 51941071 51941094 -14726911 + AT_rich Low_complexity Low_complexity 1 23 0 26 0 0 0 chr20 51941236 51941262 -14726743 + AT_rich Low_complexity Low_complexity 1 26 0 246 301 84 0 chr20 51945890 51945973 -14722032 - MIR3 SINE MIR -41 167 78 977 233 56 14 chr20 51945975 51946190 -14721815 - MER58A DNA MER1_type 0 224 1 577 253 237 5 chr20 51946248 51946446 -14721559 - MIR SINE MIR -1 261 18 864 161 0 0 chr20 51946468 51946598 -14721407 + FLAM_C SINE Alu 1 130 -3 248 331 45 23 chr20 51946700 51946833 -14721172 + L2 LINE L2 3177 3312 -1 197 285 203 19 chr20 51946911 51947069 -14720936 + L2 LINE L2 2695 2881 -433 2012 161 0 10 chr20 51947388 51947698 -14720307 + AluJo SINE Alu 6 312 0 1101 105 13 0 chr20 51947713 51947914 -14720091 + AluSg/x SINE Alu 129 331 0 1006 244 38 27 chr20 51947989 51948253 -14719752 + MIR SINE MIR 2 261 -1 232 333 16 48 chr20 51948577 51948703 -14719302 + L2 LINE L2 2986 3107 -165 261 182 0 0 chr20 51948736 51948791 -14719214 + (TG)n Simple_repeat Simple_repeat 1 55 0 309 327 35 9 chr20 51948801 51948914 -14719091 + L2 LINE L2 3146 3261 -11 1925 165 0 3 chr20 51948969 51949266 -14718739 - AluJo SINE Alu -10 302 7 282 289 67 22 chr20 51949275 51949365 -14718640 - L2 LINE L2 -15 3298 3205 2291 113 0 7 chr20 51949559 51949868 -14718137 + AluSq SINE Alu 1 307 -6 1882 134 72 7 chr20 51950104 51950394 -14717611 - AluJo SINE Alu -1 311 3 365 204 87 60 chr20 51950642 51950759 -14717246 + MIR SINE MIR 30 148 -62 1085 206 23 5 chr20 51950763 51950977 -14717028 + MER20 DNA MER1_type 2 219 0 297 253 25 13 chr20 51951615 51951694 -14716311 + MIR SINE MIR 71 150 -112 452 288 0 8 chr20 51951815 51951940 -14716065 + MIR SINE MIR 46 164 -62 22 35 0 0 chr20 51951949 51951978 -14716027 + AT_rich Low_complexity Low_complexity 1 29 0 2312 73 21 0 chr20 51951981 51952269 -14715736 + AluSq SINE Alu 1 294 -19 312 225 28 0 chr20 51952891 51952962 -14715043 - MIR SINE MIR -73 135 63 1981 186 62 19 chr20 51953036 51953505 -14714500 + L1MB8 LINE L1 5689 6177 -1 643 140 0 19 chr20 51953540 51953557 -14714448 - AluJb SINE Alu 0 312 296 2333 102 20 0 chr20 51953557 51953862 -14714143 - AluSx SINE Alu -1 311 1 643 140 0 19 chr20 51953862 51953951 -14714054 - AluJb SINE Alu -16 296 208 281 116 0 0 chr20 51953951 51953994 -14714011 - AluJb SINE Alu -169 133 91 823 281 75 57 chr20 51954127 51954597 -14713408 - L2 LINE L2 -5 3308 2831 776 256 49 108 chr20 51954627 51955100 -14712905 + L2 LINE L2 2827 3271 -1 283 281 9 70 chr20 51955111 51955225 -14712780 - MIR SINE MIR -78 130 24 658 235 25 15 chr20 51955633 51955829 -14712176 + Charlie8 DNA MER1_type 81 278 -2139 280 290 30 20 chr20 51956039 51956139 -14711866 - L2 LINE L2 -253 3019 2919 856 197 56 2 chr20 51956279 51956538 -14711467 + MLT1J LTR MaLR 5 316 -195 233 147 0 0 chr20 51956554 51956588 -14711417 + MER58A DNA MER1_type 191 224 0 712 320 76 48 chr20 51956676 51957110 -14710895 + L2 LINE L2 2825 3270 -2 270 297 27 0 chr20 51957111 51957185 -14710820 - MIR SINE MIR -70 192 117 2299 111 20 0 chr20 51957228 51957534 -14710471 + AluSx SINE Alu 1 312 0 237 325 12 12 chr20 51958635 51958718 -14709287 - MLT1I LTR MaLR -191 218 136 336 355 90 8 chr20 51958831 51958901 -14709104 + Charlie7 DNA MER1_type 34 97 -2515 180 0 0 0 chr20 51958901 51958921 -14709084 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 336 355 90 8 chr20 51958921 51959084 -14708921 + Charlie7 DNA MER1_type 97 286 -2326 882 245 6 89 chr20 51959354 51959446 -14708559 + Charlie7 DNA MER1_type 325 423 -2189 812 135 0 78 chr20 51959446 51959587 -14708418 + FLAM_C SINE Alu 4 133 0 882 245 6 89 chr20 51959587 51959841 -14708164 + Charlie7 DNA MER1_type 423 642 -1970 765 240 87 10 chr20 51959951 51960159 -14707846 + MIR SINE MIR 36 259 -3 199 288 51 0 chr20 51960170 51960229 -14707776 + L3 LINE CR1 1338 1399 -178 527 281 44 6 chr20 51960268 51960428 -14707577 + MIR SINE MIR 20 185 -77 216 0 0 0 chr20 51960432 51960456 -14707549 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 1310 243 148 14 chr20 51960462 51960909 -14707096 - L2 LINE L2 -37 3276 2790 395 315 74 6 chr20 51961333 51961495 -14706510 + MLT1J LTR MaLR 28 200 -311 2246 115 3 3 chr20 51961522 51961827 -14706178 - AluSx SINE Alu -7 305 1 680 243 46 38 chr20 51961835 51962074 -14705931 + MLT1J LTR MaLR 205 445 -66 1248 268 47 30 chr20 51962603 51963006 -14704999 + L2 LINE L2 2722 3144 -169 1652 181 57 0 chr20 51963006 51963287 -14704718 - AluJb SINE Alu -15 297 1 1248 268 47 30 chr20 51963287 51963458 -14704547 + L2 LINE L2 3144 3311 -2 255 93 0 0 chr20 51963503 51963546 -14704459 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 493 333 13 0 chr20 51963673 51963832 -14704173 - MIR SINE MIR 0 262 102 349 307 119 32 chr20 51963808 51964026 -14703979 - L2 LINE L2 -203 3069 2833 * 389 327 94 6 chr20 51964055 51964214 -14703791 - MIR SINE MIR -63 199 27 262 197 224 0 chr20 51964272 51964348 -14703657 - MIR SINE MIR -17 245 153 1429 285 26 21 chr20 51964422 51964889 -14703116 + MLT1K LTR MaLR 116 584 -4 296 294 11 22 chr20 51964894 51964986 -14703019 - MIR SINE MIR -109 153 63 329 207 134 0 chr20 51965498 51965580 -14702425 + MIR SINE MIR 29 121 -141 459 190 11 0 chr20 51965715 51965828 -14702177 + MIR SINE MIR 101 213 -49 254 248 248 0 chr20 51965901 51966018 -14701987 + Charlie8 DNA MER1_type 45 190 -2227 929 295 127 24 chr20 51966439 51966829 -14701176 - L2 LINE L2 -187 3126 2778 2247 98 14 0 chr20 51966829 51967114 -14700891 + AluSq SINE Alu 1 289 -24 428 0 19 0 chr20 51967117 51967169 -14700836 + (TAAAA)n Simple_repeat Simple_repeat 1 53 0 929 295 127 24 chr20 51967169 51967482 -14700523 - L2 LINE L2 -536 2777 2343 2259 115 3 10 chr20 51967777 51968090 -14699915 + AluJb SINE Alu 1 311 -1 456 290 80 0 chr20 51968096 51968234 -14699771 + L2 LINE L2 3161 3309 -4 215 292 62 0 chr20 51968273 51968338 -14699667 + MIR SINE MIR 180 248 -14 960 251 125 36 chr20 51968843 51969178 -14698827 - L2 LINE L2 -3 3310 2946 1072 191 58 2 chr20 51969239 51969464 -14698541 - MIR SINE MIR -1 261 27 1021 232 93 80 chr20 51969641 51969810 -14698195 + MLT1K LTR MaLR 122 287 -301 2190 100 0 4 chr20 51969810 51970124 -14697881 - AluSc SINE Alu 0 313 1 1021 232 93 80 chr20 51970124 51970392 -14697613 + MLT1K LTR MaLR 287 566 -22 1273 156 0 0 chr20 51970465 51970651 -14697354 - AluSx SINE Alu -12 300 115 277 54 0 0 chr20 51970651 51970688 -14697317 - U5 snRNA snRNA -76 40 4 1194 66 0 0 chr20 51970690 51970826 -14697179 - AluSx SINE Alu -176 136 1 370 259 27 18 chr20 51971220 51971332 -14696673 - L2 LINE L2 0 3272 3160 339 275 50 25 chr20 51971531 51971651 -14696354 + L2 LINE L2 3146 3268 -4 243 218 0 0 chr20 51971740 51971795 -14696210 + (TCCA)n Simple_repeat Simple_repeat 2 56 0 217 174 0 43 chr20 51971802 51971848 -14696157 + CT-rich Low_complexity Low_complexity 1 44 0 2045 143 36 0 chr20 51972046 51972347 -14695658 - AluJb SINE Alu 0 312 1 1160 150 6 0 chr20 51972513 51972686 -14695319 + AluJo SINE Alu 1 174 -138 2935 136 35 31 chr20 51972730 51973275 -14694730 + LTR10A LTR ERV1 1 547 -62 904 153 0 0 chr20 51973290 51973421 -14694584 + AluJo SINE Alu 171 301 -11 408 288 80 55 chr20 51973430 51973704 -14694301 - MER102b DNA MER1_type -22 319 39 576 195 41 24 chr20 51973886 51974009 -14693996 - MIR SINE MIR -107 155 31 406 236 90 62 chr20 51974010 51974154 -14693851 + MER20B DNA MER1_type 1 148 -635 180 167 0 0 chr20 51974232 51974262 -14693743 - L2 LINE L2 -21 3292 3263 519 241 0 9 chr20 51974269 51974381 -14693624 - MIR SINE MIR -85 177 67 898 198 60 17 chr20 51974381 51974613 -14693392 - MER96B DNA MER1_type? 0 417 176 2040 105 0 65 chr20 51974613 51974936 -14693069 - AluSx SINE Alu -10 302 1 253 235 0 0 chr20 51974947 51974998 -14693007 - MER96B DNA MER1_type? -366 51 1 395 287 72 31 chr20 51975344 51975539 -14692466 + MIR SINE MIR 5 207 -55 2105 110 0 3 chr20 51976218 51976530 -14691475 + AluSx SINE Alu 1 311 0 2370 239 57 30 chr20 51976571 51977329 -14690676 + MER20B DNA MER1_type 1 778 -5 358 214 12 0 chr20 51977483 51977567 -14690438 - MER96B DNA MER1_type? -90 85 1 351 348 123 0 chr20 51977588 51977726 -14690279 + L2 LINE L2 3117 3271 -1 22 35 0 0 chr20 51977755 51977784 -14690221 + AT_rich Low_complexity Low_complexity 1 29 0 200 315 87 22 chr20 51977928 51978020 -14689985 - L2 LINE L2 -190 3082 2985 234 217 22 0 chr20 51978028 51978074 -14689931 - MIR3 SINE MIR -44 164 118 348 192 232 0 chr20 51978093 51978192 -14689813 + MIR3 SINE MIR 52 173 -35 1059 138 50 46 chr20 51978342 51978560 -14689445 + MER20 DNA MER1_type 1 219 0 324 344 0 8 chr20 51978818 51978940 -14689065 - MIR SINE MIR -107 155 35 2644 35 3 13 chr20 51978966 51979277 -14688728 - AluY SINE Alu -3 308 1 231 347 50 16 chr20 51979584 51979705 -14688300 + MIR SINE MIR 87 211 -51 262 206 29 0 chr20 51980036 51980104 -14687901 - L2 LINE L2 -18 3254 3185 581 291 55 15 chr20 51980202 51980503 -14687502 - L2 LINE L2 -311 3002 2692 234 348 15 22 chr20 51980762 51980897 -14687108 - MER5B DNA MER1_type -26 152 19 242 286 9 48 chr20 51980954 51981059 -14686946 + MIR SINE MIR 2 102 -160 2273 122 0 0 chr20 51981113 51981417 -14686588 - AluSx SINE Alu -8 304 1 286 322 107 0 chr20 51981419 51981540 -14686465 + MIR SINE MIR 117 250 -12 1452 205 30 18 chr20 51981603 51981940 -14686065 - MER58B DNA MER1_type 0 341 1 277 261 191 9 chr20 51981941 51982056 -14685949 - MIR SINE MIR -47 215 80 257 188 0 0 chr20 51982058 51982106 -14685899 - MER58B DNA MER1_type -32 309 262 228 233 50 17 chr20 51982117 51982177 -14685828 - MIR SINE MIR -200 62 1 485 228 44 7 chr20 51982754 51982890 -14685115 - L2 LINE L2 -60 3253 3113 399 250 43 17 chr20 51982925 51983041 -14684964 + MLT1J LTR MaLR 24 142 -369 231 294 15 0 chr20 51983181 51983249 -14684756 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 429 20 0 0 chr20 51983250 51983300 -14684705 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 457 299 108 10 chr20 51983442 51983636 -14684369 + MIR SINE MIR 50 262 0 220 297 127 30 chr20 51983644 51983809 -14684196 - L2 LINE L2 -212 3060 2880 1503 259 138 13 chr20 51984069 51984966 -14683039 + L2 LINE L2 2309 3313 0 290 313 14 34 chr20 51985058 51985205 -14682800 - MIR3 SINE MIR -34 174 31 195 284 45 30 chr20 51985676 51985743 -14682262 + MIR SINE MIR 78 145 -117 539 221 69 0 chr20 51985818 51985858 -14682147 - MIR SINE MIR -18 244 208 325 274 208 9 chr20 51985858 51986070 -14681935 + MER112 DNA MER1_type 3 256 0 539 221 69 0 chr20 51986070 51986174 -14681831 - MIR SINE MIR -54 208 90 370 320 67 16 chr20 51986534 51986728 -14681277 + L2 LINE L2 2617 2820 -494 183 288 15 15 chr20 51986808 51986874 -14681131 + L2 LINE L2 2967 3032 -240 1728 149 57 7 chr20 51986974 51987093 -14680912 + AluJo SINE Alu 1 113 -199 234 0 0 0 chr20 51987093 51987119 -14680886 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1728 149 57 7 chr20 51987119 51987280 -14680725 + AluJo SINE Alu 113 295 -17 198 342 196 0 chr20 51987343 51987527 -14680478 - MIR SINE MIR -28 234 15 531 232 82 16 chr20 51988093 51988287 -14679718 + L2 LINE L2 2816 3022 -291 862 189 6 0 chr20 51988363 51988527 -14679478 - FRAM SINE Alu -1 165 1 756 284 83 36 chr20 51988554 51989022 -14678983 + L1MC4a LINE L1 5676 6165 -1643 522 241 46 30 chr20 51989949 51990131 -14677874 - MIR SINE MIR -62 200 9 1555 255 36 25 chr20 51990312 51991110 -14676895 + L2 LINE L2 2491 3293 -20 264 320 10 0 chr20 51991404 51991501 -14676504 - MIR SINE MIR -72 136 39 655 246 186 23 chr20 51992161 51992609 -14675396 + MLT1G1 LTR MaLR 8 595 0 912 178 0 0 chr20 51993113 51993259 -14674746 + FRAM SINE Alu 1 146 -30 2320 120 0 0 chr20 51993259 51993558 -14674447 - AluSx SINE Alu -13 299 1 1836 196 48 0 chr20 51993867 51994265 -14673740 + L1MB7 LINE L1 5758 6174 -10 682 286 4 47 chr20 51994507 51994615 -14673390 - MIR SINE MIR 0 262 151 2140 215 25 35 chr20 51994615 51995135 -14672870 + LTR40a LTR ERVL 1 515 -4 682 286 4 47 chr20 51995135 51995260 -14672745 - MIR SINE MIR -111 151 39 746 220 90 5 chr20 51996127 51996376 -14671629 + L2 LINE L2 2794 3062 -251 198 49 49 24 chr20 51996414 51996455 -14671550 + (TA)n Simple_repeat Simple_repeat 2 43 0 2205 141 0 3 chr20 51996653 51996966 -14671039 + AluJb SINE Alu 1 312 0 275 305 21 11 chr20 51997025 51997120 -14670885 + MER102b DNA MER1_type 243 338 -3 225 282 171 26 chr20 51997234 51997351 -14670654 + MIR SINE MIR 117 250 -12 239 266 64 21 chr20 51997473 51997567 -14670438 - MIR3 SINE MIR -18 190 93 1132 281 174 34 chr20 51997675 51998151 -14669854 + MLT1K LTR MaLR 13 555 -33 181 359 19 19 chr20 51998252 51998358 -14669647 - L2 LINE L2 -469 2845 2740 324 323 20 0 chr20 51999054 51999153 -14668852 - MIR3 SINE MIR -54 154 54 364 331 8 0 chr20 51999155 51999276 -14668729 + L2 LINE L2 3190 3311 -2 400 345 36 6 chr20 51999316 51999481 -14668524 - MIR SINE MIR -60 202 33 3231 149 20 7 chr20 51999614 52000199 -14667806 + L1MB7 LINE L1 5583 6175 -9 439 323 6 19 chr20 52000460 52000618 -14667387 - MIR SINE MIR -28 234 79 188 171 24 0 chr20 52000696 52000737 -14667268 + MIR SINE MIR 96 137 -71 914 162 6 0 chr20 52001165 52001344 -14666661 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 335 275 0 11 chr20 52001345 52001436 -14666569 + (TTCA)n Simple_repeat Simple_repeat 2 91 0 636 336 7 46 chr20 52001436 52001719 -14666286 - L2 LINE L2 0 3272 3001 668 290 73 16 chr20 52001728 52001976 -14666029 - MLT1L LTR MaLR -2 613 352 246 203 0 72 chr20 52001983 52002050 -14665955 - MLT1L LTR MaLR -406 209 148 728 186 93 47 chr20 52002050 52002243 -14665762 + MER20 DNA MER1_type 1 202 -17 210 289 0 0 chr20 52002311 52002363 -14665642 - L2 LINE L2 -219 3053 3002 243 344 53 8 chr20 52002433 52002564 -14665441 + L2 LINE L2 3175 3311 -2 357 327 36 24 chr20 52002675 52002843 -14665162 - MIR3 SINE MIR -15 193 24 592 308 21 52 chr20 52003071 52003360 -14664645 + MER102b DNA MER1_type 35 314 -27 190 206 32 0 chr20 52004651 52004714 -14663291 + CT-rich Low_complexity Low_complexity 3 67 0 988 178 89 31 chr20 52004716 52004975 -14663030 - ORSL DNA AcHobo 0 275 2 193 399 77 0 chr20 52004984 52005127 -14662878 + MIR SINE MIR 59 212 -50 726 206 27 0 chr20 52005500 52005646 -14662359 - MER45A DNA AcHobo -17 161 12 216 265 0 0 chr20 52005749 52005798 -14662207 + L2 LINE L2 3253 3301 -12 711 282 29 25 chr20 52006088 52006333 -14661672 + L2 LINE L2 3061 3306 -7 269 267 13 0 chr20 52006365 52006440 -14661565 + MIR SINE MIR 80 155 -107 4361 130 11 39 chr20 52006856 52007650 -14660355 + L1MB7 LINE L1 5405 6176 -8 860 237 69 62 chr20 52007719 52008352 -14659653 - L2 LINE L2 -88 3225 2539 514 217 0 9 chr20 52008664 52008770 -14659235 + MIR SINE MIR 148 252 -10 2119 143 6 19 chr20 52008778 52009142 -14658863 - L1PA16 LINE L1 -2 6164 5806 1862 126 3 82 chr20 52009145 52009462 -14658543 - AluJo SINE Alu -16 296 5 207 231 26 39 chr20 52009683 52009761 -14658244 - MIR SINE MIR -132 130 54 2037 140 0 3 chr20 52009854 52010177 -14657828 - AluSx SINE Alu 0 322 1 27 49 0 0 chr20 52010186 52010227 -14657778 + AT_rich Low_complexity Low_complexity 1 41 0 229 254 0 60 chr20 52010249 52010316 -14657689 - L1MC4a LINE L1 -1672 6136 6074 528 197 51 51 chr20 52010392 52010570 -14657435 + MLT1J LTR MaLR 3 180 -331 23 0 0 0 chr20 52010700 52010723 -14657282 + AT_rich Low_complexity Low_complexity 1 23 0 352 227 110 39 chr20 52010723 52010877 -14657128 + MLT1J LTR MaLR 253 417 -94 767 333 85 21 chr20 52010951 52011426 -14656579 - L1MC4a LINE L1 -327 5794 5477 276 294 37 28 chr20 52011428 52011537 -14656468 - MIR SINE MIR -139 123 14 331 256 56 56 chr20 52011677 52011802 -14656203 + MIR3 SINE MIR 53 177 -31 712 272 12 0 chr20 52012101 52012270 -14655735 - MIR SINE MIR -76 186 16 927 175 116 0 chr20 52012275 52012464 -14655541 - MER20 DNA MER1_type -5 214 4 2072 152 3 0 chr20 52012517 52012819 -14655186 - AluSx SINE Alu -9 303 1 211 300 120 20 chr20 52013060 52013160 -14654845 + MIR SINE MIR 86 195 -67 387 246 29 52 chr20 52013181 52013316 -14654689 + L1MC4a LINE L1 5734 5742 -389 2337 97 3 3 chr20 52013316 52013614 -14654391 - AluSc SINE Alu -9 300 3 387 246 29 52 chr20 52013614 52013700 -14654305 + L1MC4a LINE L1 5742 5828 -303 319 311 48 0 chr20 52013700 52013803 -14654202 - L2 LINE L2 -6 3307 3200 189 0 0 0 chr20 52013942 52013963 -14654042 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 2067 96 37 7 chr20 52013963 52014235 -14653770 - AluSx SINE Alu -32 280 1 450 285 14 21 chr20 52014356 52014500 -14653505 - L2 LINE L2 -7 3306 3164 1007 238 33 8 chr20 52014675 52014919 -14653086 - MIR SINE MIR 0 262 13 273 344 0 0 chr20 52016810 52016935 -14651070 + (CAGA)n Simple_repeat Simple_repeat 1 125 0 347 20 0 41 chr20 52016971 52017020 -14650985 + (CAGA)n Simple_repeat Simple_repeat 1 47 0 203 328 37 0 chr20 52017023 52017157 -14650848 + (CAGT)n Simple_repeat Simple_repeat 3 141 0 297 0 0 0 chr20 52017275 52017292 -14650713 + (CAGG)n Simple_repeat Simple_repeat 1 50 0 297 0 0 0 chr20 52017292 52017325 -14650680 + (CAGG)n Simple_repeat Simple_repeat 2 34 0 366 23 0 0 chr20 52017698 52017741 -14650264 + (TG)n Simple_repeat Simple_repeat 2 44 0 467 254 96 23 chr20 52018338 52018515 -14649490 + MIR SINE MIR 48 237 -25 190 236 28 42 chr20 52018656 52018728 -14649277 + MIR3 SINE MIR 111 181 -27 604 280 139 49 chr20 52018793 52019240 -14648765 + MLT1K LTR MaLR 84 570 -18 630 251 76 0 chr20 52019291 52019462 -14648543 - MIR SINE MIR -74 188 5 418 172 30 20 chr20 52019560 52019659 -14648346 - MIR3 SINE MIR -9 199 100 702 258 111 25 chr20 52019767 52020011 -14647994 + MLT1K LTR MaLR 43 307 -281 235 250 179 45 chr20 52019990 52020102 -14647903 - MER113 DNA MER1_type? -191 330 204 * 336 176 52 143 chr20 52020213 52020292 -14647713 - MER113 DNA MER1_type? -325 196 111 2421 100 0 0 chr20 52020292 52020603 -14647402 + AluSx SINE Alu 1 311 -1 336 176 52 143 chr20 52020603 52020733 -14647272 - MER113 DNA MER1_type? -410 111 6 205 400 0 0 chr20 52020743 52020833 -14647172 + MIR SINE MIR 33 122 -86 274 250 10 67 chr20 52021518 52021622 -14646383 + MIR SINE MIR 165 262 0 1198 234 19 0 chr20 52021644 52021900 -14646105 - L1ME2 LINE L1 -9 6155 5895 812 307 42 0 chr20 52022217 52022455 -14645550 - MIR SINE MIR -4 258 11 265 39 0 0 chr20 52022584 52022623 -14645382 - MIR SINE MIR -57 151 112 471 211 58 0 chr20 52022700 52022804 -14645201 + L2 LINE L2 3204 3313 0 357 290 0 19 chr20 52022809 52022916 -14645089 - MIR3 SINE MIR -32 176 72 2462 75 7 3 chr20 52023493 52023801 -14644204 + AluY SINE Alu 1 309 -2 1093 199 115 101 chr20 52023830 52024266 -14643739 - LTR16A1 LTR ERVL -15 442 1 1043 116 29 0 chr20 52024306 52024479 -14643526 - L1MA2 LINE L1 0 6304 6127 218 234 0 0 chr20 52025162 52025209 -14642796 - MIR SINE MIR -66 142 96 454 273 123 71 chr20 52025209 52025407 -14642598 - L2 LINE L2 -5 3308 3085 2251 96 0 17 chr20 52025407 52025708 -14642297 + AluSx SINE Alu 1 296 -16 454 273 123 71 chr20 52025708 52025835 -14642170 - L2 LINE L2 -228 3085 2966 741 236 129 4 chr20 52025877 52026118 -14641887 - L2 LINE L2 -469 2845 2575 2154 148 0 16 chr20 52026125 52026442 -14641563 - AluJb SINE Alu 0 312 1 1097 156 38 5 chr20 52026449 52026660 -14641345 - MER20 DNA MER1_type -1 218 1 643 196 29 17 chr20 52026668 52026882 -14641123 + MER58 DNA MER1_type 1 2420 0 597 272 67 13 chr20 52026896 52027135 -14640870 - L2 LINE L2 -746 2568 2317 382 291 28 35 chr20 52027128 52027269 -14640736 + MIR SINE MIR 6 145 -117 * 244 285 57 16 chr20 52027339 52027462 -14640543 + MER5A DNA MER1_type 6 133 -56 * 273 257 50 20 chr20 52027365 52027466 -14640539 - MER5A DNA MER1_type -22 167 64 384 296 0 38 chr20 52027553 52027685 -14640320 - MIR3 SINE MIR -28 180 54 971 161 6 0 chr20 52028041 52028202 -14639803 - MER5B DNA MER1_type -6 172 11 560 227 45 11 chr20 52028213 52028389 -14639616 - MER113 DNA MER1_type? -62 459 278 325 239 103 17 chr20 52028418 52028535 -14639470 - MER113 DNA MER1_type? -330 191 65 359 316 78 16 chr20 52028539 52028732 -14639273 + MLT1K LTR MaLR 131 335 -253 238 194 69 42 chr20 52028744 52028816 -14639189 - MIR SINE MIR -94 114 41 2369 92 0 0 chr20 52028880 52029183 -14638822 - AluY SINE Alu 0 311 9 841 267 61 66 chr20 52029517 52030043 -14637962 - L2 LINE L2 0 3272 2767 253 243 0 27 chr20 52030217 52030291 -14637714 + GA-rich Low_complexity Low_complexity 2 73 0 921 240 25 0 chr20 52030326 52030522 -14637483 + MIR SINE MIR 9 209 -53 294 308 56 30 chr20 52030965 52031256 -14636749 - L2 LINE L2 -234 3038 2742 648 248 73 30 chr20 52031418 52031652 -14636353 - L2 LINE L2 0 3313 3070 330 26 0 0 chr20 52032827 52032866 -14635139 + (ATG)n Simple_repeat Simple_repeat 2 40 0 382 278 71 8 chr20 52032894 52033020 -14634985 - MIR SINE MIR -27 235 102 1544 205 119 14 chr20 52033293 52033713 -14634292 + MLT2B1 LTR ERVL 1 464 -56 926 199 6 0 chr20 52033717 52033888 -14634117 + FRAM SINE Alu 1 171 -5 261 146 0 0 chr20 52033890 52033931 -14634074 + MLT2B1 LTR ERVL 480 520 0 287 276 11 23 chr20 52034046 52034133 -14633872 + Charlie8 DNA MER1_type 1 86 -2331 829 282 74 30 chr20 52034189 52034470 -14633535 + L1MC/D LINE L1 5373 5681 -440 201 39 0 0 chr20 52034470 52034496 -14633509 + (CA)n Simple_repeat Simple_repeat 1 26 0 829 282 74 30 chr20 52034496 52034529 -14633476 + L1MC/D LINE L1 5681 5711 -410 2375 48 0 28 chr20 52034532 52034853 -14633152 - AluY SINE Alu 0 313 1 1832 164 31 0 chr20 52034853 52035139 -14632866 - AluJo SINE Alu -15 297 3 287 227 27 0 chr20 52035142 52035217 -14632788 + Charlie8 DNA MER1_type 59 135 -2282 957 220 6 0 chr20 52035533 52035710 -14632295 + MER45A DNA AcHobo 1 178 0 367 305 104 13 chr20 52036178 52036391 -14631614 - MIR3 SINE MIR -35 227 1 364 179 0 0 chr20 52036538 52036605 -14631400 - L2 LINE L2 -257 3056 2990 317 233 0 0 chr20 52036615 52036675 -14631330 - MIR SINE MIR -73 135 76 325 143 16 32 chr20 52036759 52036822 -14631183 - MER58A DNA MER1_type -4 220 159 347 231 13 0 chr20 52036825 52036903 -14631102 - MER58A DNA MER1_type 0 120 42 1020 250 246 9 chr20 52037316 52037780 -14630225 + MLT1K LTR MaLR 13 586 -2 2021 140 0 24 chr20 52038495 52038788 -14629217 + AluJo SINE Alu 2 287 -25 748 277 94 0 chr20 52039037 52039261 -14628744 - MIR SINE MIR 0 262 18 259 281 92 54 chr20 52039429 52039852 -14628153 - L2 LINE L2 -213 3059 2622 627 254 110 19 chr20 52039858 52040156 -14627849 + L2 LINE L2 2763 3104 -209 2439 84 0 3 chr20 52040184 52040482 -14627523 + AluSx SINE Alu 1 297 -15 547 221 21 14 chr20 52040497 52040642 -14627363 - L1MC5 LINE L1 -206 7755 7610 636 250 27 7 chr20 52040710 52040858 -14627147 + L2 LINE L2 3159 3309 -4 410 231 221 40 chr20 52040889 52041088 -14626917 - MIR SINE MIR -15 247 13 350 266 45 45 chr20 52041121 52041275 -14626730 + L2 LINE L2 2522 2675 -639 479 151 23 0 chr20 52041277 52041363 -14626642 + MER20 DNA MER1_type 128 215 -4 1459 227 149 32 chr20 52041530 52042216 -14625789 - L2 LINE L2 0 3313 2536 1508 216 61 20 chr20 52042478 52042918 -14625087 + L1MB2 LINE L1 4905 5362 -784 1748 108 24 7 chr20 52042918 52043205 -14624800 + MER44D DNA MER2_type 1 562 -47 4211 133 20 70 chr20 52043223 52043383 -14624622 + L1MB2 LINE L1 5360 5526 -645 2237 140 99 13 chr20 52043383 52043775 -14624230 + MSTB LTR MaLR 1 426 0 4211 133 20 70 chr20 52043775 52044469 -14623536 + L1MB2 LINE L1 5526 6171 0 315 214 43 0 chr20 52044495 52044565 -14623440 + MER5B DNA MER1_type 105 177 -1 227 278 167 16 chr20 52044565 52044691 -14623314 - MIR SINE MIR -90 172 28 644 283 48 32 chr20 52045148 52045399 -14622606 + MIR SINE MIR 5 259 -3 874 218 81 21 chr20 52045576 52045810 -14622195 - LTR16C LTR ERVL -4 487 240 697 328 30 21 chr20 52046040 52046275 -14621730 - MIR SINE MIR -3 259 23 220 217 122 70 chr20 52046587 52046702 -14621303 + MIR3 SINE MIR 81 201 -7 * 634 272 26 15 chr20 52046664 52046859 -14621146 - MIR SINE MIR -37 225 29 580 342 49 0 chr20 52047118 52047343 -14620662 - MIR SINE MIR -12 250 15 1890 155 9 28 chr20 52047395 52047712 -14620293 + AluJo SINE Alu 1 311 -1 293 343 78 0 chr20 52047738 52047904 -14620101 - MIR SINE MIR 0 262 84 386 203 0 196 chr20 52047908 52048061 -14619944 + MIR SINE MIR 18 140 -122 265 292 14 0 chr20 52048109 52048181 -14619824 + LTR67 LTR ERVL 101 173 -384 * 923 264 53 53 chr20 52048149 52048245 -14619760 + MLT1L LTR MaLR 200 295 -320 2152 121 0 20 chr20 52048245 52048551 -14619454 + AluSx SINE Alu 1 300 -12 923 264 53 53 chr20 52048551 52048870 -14619135 + MLT1L LTR MaLR 294 615 0 261 366 104 12 chr20 52049399 52049563 -14618442 - MIR SINE MIR -23 239 61 405 58 0 0 chr20 52049862 52049914 -14618091 + (TTCA)n Simple_repeat Simple_repeat 2 53 0 1563 241 53 16 chr20 52049927 52050560 -14617445 - L2 LINE L2 -39 3274 2616 363 200 76 48 chr20 52050582 52050687 -14617318 + MIR SINE MIR 48 155 -107 189 0 0 0 chr20 52051949 52051970 -14616035 + (TCC)n Simple_repeat Simple_repeat 3 23 0 22 35 0 0 chr20 52053251 52053280 -14614725 + GC_rich Low_complexity Low_complexity 1 29 0 290 150 0 17 chr20 52053818 52053878 -14614127 + (TTTC)n Simple_repeat Simple_repeat 3 61 0 681 108 8 16 chr20 52054197 52054326 -14613679 + (TCC)n Simple_repeat Simple_repeat 2 129 0 59 97 0 0 chr20 52054747 52054932 -14613073 + GC_rich Low_complexity Low_complexity 1 185 0 195 69 0 0 chr20 52054933 52054962 -14613043 + (TCC)n Simple_repeat Simple_repeat 1 29 0 180 0 0 0 chr20 52054963 52054983 -14613022 + (CGG)n Simple_repeat Simple_repeat 3 22 0 403 266 106 62 chr20 52055255 52055481 -14612524 - L2 LINE L2 -1 3312 3077 313 272 96 8 chr20 52055558 52055683 -14612322 - L2 LINE L2 -124 3189 3054 285 29 0 0 chr20 52055684 52055718 -14612287 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 198 271 333 11 chr20 52055736 52055913 -14612092 - L2 LINE L2 -21 3251 3018 2069 144 7 3 chr20 52055978 52056283 -14611722 + AluJo SINE Alu 1 306 -6 402 259 58 105 chr20 52056443 52056768 -14611237 + L2 LINE L2 2533 2842 -472 * 497 292 70 35 chr20 52056752 52057036 -14610969 - L2 LINE L2 -100 3213 2920 271 296 65 37 chr20 52057423 52057531 -14610474 - MIR SINE MIR -123 139 29 345 245 66 19 chr20 52057606 52057712 -14610293 - L2 LINE L2 -6 3266 3156 956 207 0 0 chr20 52057876 52058040 -14609965 - FRAM SINE Alu -2 164 1 690 300 115 23 chr20 52058391 52058985 -14609020 - L1MC/D LINE L1 -601 5561 4909 396 0 0 0 chr20 52058985 52059029 -14608976 + (TG)n Simple_repeat Simple_repeat 1 44 0 690 300 115 23 chr20 52059029 52059339 -14608666 - L1MC/D LINE L1 -1253 4909 4629 2004 207 75 66 chr20 52059448 52059993 -14608012 + MLT2B3 LTR ERVL 5 554 0 180 0 0 0 chr20 52060110 52060130 -14607875 + (TTTG)n Simple_repeat Simple_repeat 3 22 0 821 179 11 47 chr20 52060138 52060328 -14607677 + MER20 DNA MER1_type 37 219 0 1307 296 103 11 chr20 52060373 52061060 -14606945 - L2 LINE L2 -3 3310 2552 660 152 8 32 chr20 52061087 52061170 -14606835 + MER20 DNA MER1_type 97 178 -41 2405 111 10 0 chr20 52061170 52061477 -14606528 + AluSx SINE Alu 1 310 -2 660 152 8 32 chr20 52061477 52061518 -14606487 + MER20 DNA MER1_type 178 218 -1 623 235 111 30 chr20 52061760 52061945 -14606060 + MIR SINE MIR 2 183 -58 189 240 20 40 chr20 52061984 52062034 -14605971 + L2 LINE L2 3150 3198 -74 905 283 55 57 chr20 52062040 52062460 -14605545 - MLT1L LTR MaLR -31 584 166 300 235 37 25 chr20 52062553 52062634 -14605371 + L2 LINE L2 3191 3272 0 5134 76 29 10 chr20 52062666 52063388 -14604617 + L1MA1 LINE L1 5567 6302 0 766 208 53 138 chr20 52063715 52064014 -14603991 + MER102a DNA MER1_type 1 265 -1152 2433 103 3 0 chr20 52064014 52064324 -14603681 - AluSx SINE Alu -1 311 1 766 208 53 138 chr20 52064324 52064385 -14603620 + MER102a DNA MER1_type 265 330 0 438 252 36 0 chr20 52064584 52064695 -14603310 + MLT1K LTR MaLR 474 588 0 1911 161 0 17 chr20 52064730 52065021 -14602984 - AluJb SINE Alu -18 294 9 1579 189 21 7 chr20 52065147 52065460 -14602545 + AluJb SINE Alu 1 317 0 305 318 18 0 chr20 52066119 52066229 -14601776 + MIR SINE MIR 136 247 -15 381 210 0 25 chr20 52066259 52066340 -14601665 - MIR SINE MIR 0 262 184 582 240 33 8 chr20 52066569 52066690 -14601315 - FLAM_A SINE Alu -9 124 1 192 279 0 0 chr20 52066821 52066882 -14601123 + (CCCA)n Simple_repeat Simple_repeat 4 64 0 269 258 11 0 chr20 52066936 52067029 -14600976 + (TCCA)n Simple_repeat Simple_repeat 1 94 0 315 263 34 17 chr20 52067043 52067161 -14600844 + (TCCA)n Simple_repeat Simple_repeat 3 122 0 260 333 72 13 chr20 52067736 52067889 -14600116 + L2 LINE L2 2623 2784 -530 594 209 86 144 chr20 52068140 52068537 -14599468 + MLT1H1 LTR MaLR 75 448 -107 2188 126 0 10 chr20 52068604 52068905 -14599100 + AluSx SINE Alu 1 298 -14 399 217 11 0 chr20 52068911 52069003 -14599002 + MLT1H1 LTR MaLR 463 555 0 237 236 102 108 chr20 52069005 52069162 -14598843 + L2 LINE L2 2931 3086 -186 614 211 114 34 chr20 52069226 52069401 -14598604 - MIR SINE MIR -64 198 10 550 279 83 5 chr20 52069627 52069831 -14598174 - MLT1L LTR MaLR -350 265 46 2810 132 19 0 chr20 52069966 52070390 -14597615 - MSTB1 LTR MaLR 0 432 1 573 282 134 43 chr20 52070637 52071127 -14596878 + L2 LINE L2 2684 3228 -85 321 294 147 7 chr20 52071119 52071262 -14596743 + L2 LINE L2 2602 2764 -550 * 1096 267 88 45 chr20 52071251 52071670 -14596335 + L2 LINE L2 2874 3310 -3 1760 178 99 21 chr20 52071671 52071721 -14596284 - L1MB7 LINE L1 -8 6176 6131 1836 142 3 39 chr20 52071721 52072031 -14595974 + AluJb SINE Alu 1 299 -13 1760 178 99 21 chr20 52072031 52072406 -14595599 - L1MB7 LINE L1 -53 6131 5718 804 211 189 19 chr20 52072790 52073055 -14594950 + MLT1J LTR MaLR 100 409 -102 2491 89 0 0 chr20 52073079 52073382 -14594623 + AluSx SINE Alu 1 303 -9 3644 116 0 13 chr20 52073743 52074279 -14593726 - MER1A DNA MER1_type 0 529 1 472 324 36 27 chr20 52074338 52074557 -14593448 + MIR SINE MIR 22 242 -20 204 313 30 0 chr20 52074786 52074853 -14593152 + MIR3 SINE MIR 87 155 -53 516 225 147 59 chr20 52074944 52075177 -14592828 - MER113 DNA MER1_type? -150 371 103 2367 101 7 0 chr20 52075177 52075474 -14592531 + AluSp SINE Alu 1 299 -14 516 225 147 59 chr20 52075474 52075547 -14592458 - MER113 DNA MER1_type? -418 103 38 2519 67 3 0 chr20 52075606 52075905 -14592100 + AluY SINE Alu 1 300 -11 189 0 0 0 chr20 52075934 52075955 -14592050 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 408 262 133 0 chr20 52076874 52077014 -14590991 + MIR SINE MIR 33 188 -63 2149 120 0 0 chr20 52077129 52077421 -14590584 - AluSx SINE Alu 0 312 21 905 256 89 0 chr20 52077547 52077828 -14590177 - MER102b DNA MER1_type -3 338 33 359 268 193 36 chr20 52078985 52079317 -14588688 + MLT1I LTR MaLR 66 408 -1 464 224 65 0 chr20 52079397 52079504 -14588501 - MER91B DNA MER1_type 0 190 77 399 196 21 31 chr20 52079512 52079609 -14588396 - MER91B DNA MER1_type -60 130 35 307 258 89 23 chr20 52079797 52079955 -14588050 + MIR SINE MIR 6 187 -21 253 280 47 65 chr20 52080124 52080231 -14587774 - MIR SINE MIR 0 262 158 2259 99 0 0 chr20 52080641 52080944 -14587061 - AluSx SINE Alu -1 311 9 226 209 104 0 chr20 52081011 52081078 -14586927 - MIR SINE MIR -109 153 80 425 296 77 12 chr20 52081114 52081283 -14586722 - MIR SINE MIR -2 260 81 284 206 41 27 chr20 52081554 52081627 -14586378 - Charlie8 DNA MER1_type -2252 165 92 374 273 201 5 chr20 52081993 52082212 -14585793 + L1MC4a LINE L1 5674 5935 -307 26 30 0 0 chr20 52082399 52082432 -14585573 + AT_rich Low_complexity Low_complexity 1 33 0 926 161 0 6 chr20 52082580 52082760 -14585245 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 402 260 0 0 chr20 52082776 52082903 -14585102 + (TGGA)n Simple_repeat Simple_repeat 4 130 0 852 213 0 0 chr20 52082921 52083280 -14584725 + (TGGA)n Simple_repeat Simple_repeat 1 359 0 188 333 64 0 chr20 52083283 52083361 -14584644 + MIR SINE MIR 179 261 -1 658 251 35 23 chr20 52083621 52083792 -14584213 - MIR SINE MIR -61 201 29 248 183 24 98 chr20 52084082 52084164 -14583841 - MIR SINE MIR -55 153 78 1447 261 131 10 chr20 52084319 52084809 -14583196 + MLT1K LTR MaLR 14 562 -26 767 238 124 18 chr20 52085505 52085778 -14582227 + MLT1H LTR MaLR 23 324 -225 385 198 26 52 chr20 52085758 52085874 -14582131 + MLT1H LTR MaLR 434 546 -3 * 607 268 78 32 chr20 52086323 52086607 -14581398 + L1MC1 LINE L1 5628 5924 -1884 1501 148 8 8 chr20 52086651 52086908 -14581097 - AluJo SINE Alu -19 293 37 1123 144 17 0 chr20 52087079 52087253 -14580752 - AluJo SINE Alu -50 262 86 191 311 33 0 chr20 52087480 52087541 -14580464 - MIR SINE MIR -85 177 115 206 295 33 0 chr20 52087541 52087602 -14580403 + L2 LINE L2 3246 3308 -5 331 229 156 15 chr20 52087669 52087854 -14580151 + MIR SINE MIR 30 243 -19 258 56 0 0 chr20 52088206 52088242 -14579763 + (TG)n Simple_repeat Simple_repeat 1 36 0 916 280 121 14 chr20 52088547 52088918 -14579087 + MLT1K LTR MaLR 22 432 -156 790 203 45 0 chr20 52088974 52089151 -14578854 + L1MC1 LINE L1 6148 6332 -1 1385 151 40 2 chr20 52089167 52089423 -14578582 + L1MD3 LINE L1 7730 7981 -14 544 199 73 52 chr20 52089443 52089579 -14578426 - MIR3 SINE MIR -55 153 15 292 317 0 20 chr20 52090047 52090148 -14577857 + MIR SINE MIR 164 262 0 1392 244 185 12 chr20 52090153 52091100 -14576905 + L2 LINE L2 1941 2723 -590 2129 104 0 3 chr20 52091100 52091397 -14576608 - AluSx SINE Alu -16 296 1 1392 244 185 12 chr20 52091397 52091416 -14576589 + L2 LINE L2 2723 2737 -576 1460 154 11 51 chr20 52091416 52091719 -14576286 - AluJo SINE Alu 0 314 23 1392 244 185 12 chr20 52091719 52091865 -14576140 + L2 LINE L2 2737 3304 -9 724 305 64 13 chr20 52091866 52092099 -14575906 - MIR SINE MIR -11 251 7 555 243 261 27 chr20 52092616 52093141 -14574864 + L2 LINE L2 2474 3112 -201 838 161 0 0 chr20 52093265 52093389 -14574616 - FLAM_A SINE Alu -8 125 2 1526 233 36 55 chr20 52093412 52093506 -14574499 + L1MC4 LINE L1 7530 7624 -418 2139 116 0 10 chr20 52093506 52093817 -14574188 + AluSc SINE Alu 1 308 -1 1526 233 36 55 chr20 52093817 52094245 -14573760 + L1MC4 LINE L1 7624 8042 0 1926 104 59 0 chr20 52094277 52094564 -14573441 + AluSx SINE Alu 1 304 -8 187 172 0 31 chr20 52094645 52094709 -14573296 + (CA)n Simple_repeat Simple_repeat 1 62 0 263 316 0 10 chr20 52094723 52094821 -14573184 + (CA)n Simple_repeat Simple_repeat 1 97 0 255 300 130 20 chr20 52095233 52095318 -14572687 + L2 LINE L2 3203 3302 -11 2151 132 14 20 chr20 52095318 52095369 -14572636 - THE1A LTR MaLR 0 355 305 180 0 0 0 chr20 52095369 52095389 -14572616 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 2151 132 14 20 chr20 52095389 52095694 -14572311 - THE1A LTR MaLR -50 305 1 255 300 130 20 chr20 52095694 52095708 -14572297 + L2 LINE L2 3302 3313 0 414 330 35 31 chr20 52095948 52096175 -14571830 - Charlie8 DNA MER1_type -2181 236 9 23 0 0 0 chr20 52096347 52096370 -14571635 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr20 52096437 52096477 -14571528 + AT_rich Low_complexity Low_complexity 1 40 0 358 246 25 34 chr20 52096843 52096961 -14571044 + MER5B DNA MER1_type 4 120 -58 236 250 62 0 chr20 52097202 52097266 -14570739 + L2 LINE L2 3246 3313 0 4323 171 43 17 chr20 52097271 52097926 -14570079 + L1MB4 LINE L1 5172 5865 -315 1728 115 17 48 chr20 52097926 52098221 -14569784 + AluSx SINE Alu 2 287 -25 4323 171 43 17 chr20 52098221 52098540 -14569465 + L1MB4 LINE L1 5865 6174 -6 1901 111 0 14 chr20 52098617 52098897 -14569108 + AluSx SINE Alu 1 276 -36 974 164 7 0 chr20 52098917 52099063 -14568942 + Tigger7 DNA MER2_type 31 177 -528 2086 88 0 36 chr20 52099093 52099401 -14568604 + AluSq SINE Alu 1 297 -16 187 310 0 0 chr20 52099427 52099485 -14568520 + MIR SINE MIR 181 238 -24 373 243 170 24 chr20 52099511 52099717 -14568288 + L1MC4a LINE L1 5861 6096 -1712 5549 144 42 37 chr20 52099737 52100249 -14567756 - L1MA9 LINE L1 0 6312 5804 2387 175 105 37 chr20 52100249 52100636 -14567369 + MER44D DNA MER2_type 1 488 -1999 2213 103 3 0 chr20 52100636 52100936 -14567069 + AluSp SINE Alu 1 301 -12 2387 175 105 37 chr20 52100936 52101063 -14566942 + MER44D DNA MER2_type 488 605 0 5549 144 42 37 chr20 52101063 52101528 -14566477 - L1MA9 LINE L1 -508 5804 5312 2275 75 0 3 chr20 52101528 52101820 -14566185 - AluSc SINE Alu -16 293 3 5549 144 42 37 chr20 52101820 52101906 -14566099 - L1MA9 LINE L1 -1000 5312 5228 25 0 0 0 chr20 52101939 52101964 -14566041 + AT_rich Low_complexity Low_complexity 1 25 0 1718 167 7 13 chr20 52102388 52102693 -14565312 - AluJo SINE Alu -9 303 1 1208 203 30 23 chr20 52102747 52103052 -14564953 + MER33 DNA MER1_type 18 324 0 584 244 39 27 chr20 52103165 52103366 -14564639 + MIR SINE MIR 38 241 -21 595 280 71 6 chr20 52103475 52103657 -14564348 + MIR SINE MIR 21 214 -48 329 329 65 42 chr20 52103763 52103931 -14564074 + MIR3 SINE MIR 10 181 -27 2001 121 0 14 chr20 52104438 52104735 -14563270 + AluSx SINE Alu 1 293 -19 191 88 29 0 chr20 52104736 52104770 -14563235 + (TA)n Simple_repeat Simple_repeat 2 36 0 849 236 135 25 chr20 52104779 52105143 -14562862 - L1MC4a LINE L1 -1904 5904 5501 415 299 117 7 chr20 52105370 52105524 -14562481 + MIR SINE MIR 24 194 -68 1171 146 0 0 chr20 52105606 52105784 -14562221 + AluJb SINE Alu 120 297 -15 232 217 87 14 chr20 52105840 52105909 -14562096 + L1ME LINE L1 5437 5510 -2298 334 333 122 24 chr20 52105913 52106168 -14561837 + L1ME LINE L1 5416 5695 -426 2050 127 0 7 chr20 52106272 52106579 -14561426 - AluSx SINE Alu -7 305 1 475 286 27 5 chr20 52106590 52106775 -14561230 - L1MC4a LINE L1 -1825 4321 4133 226 296 0 0 chr20 52107153 52107197 -14560808 + L2 LINE L2 3209 3252 -20 2204 99 0 6 chr20 52107205 52107546 -14560459 - AluSx SINE Alu 0 339 1 360 291 154 17 chr20 52107548 52107723 -14560282 - MIR SINE MIR -51 211 13 318 235 88 0 chr20 52107740 52107842 -14560163 - MIR SINE MIR -127 135 25 219 306 57 57 chr20 52107865 52107989 -14560016 + MER5A DNA MER1_type 39 162 -27 2217 112 0 0 chr20 52108236 52108548 -14559457 + AluSx SINE Alu 1 312 0 760 221 41 0 chr20 52108560 52108732 -14559273 + L1ME3 LINE L1 5650 5828 -334 2015 144 0 3 chr20 52108735 52109048 -14558957 + AluJb SINE Alu 1 312 0 811 139 0 56 chr20 52109050 52109194 -14558811 + FLAM_C SINE Alu 6 141 -2 893 241 5 10 chr20 52109194 52109401 -14558604 + L1ME3 LINE L1 5813 6018 -144 1943 119 11 0 chr20 52109426 52109745 -14558260 - AluSx SINE Alu 0 322 1 236 188 0 0 chr20 52109755 52109803 -14558202 + L1ME3 LINE L1 6114 6161 -1 185 0 40 0 chr20 52109821 52109846 -14558159 + (TAAAAA)n Simple_repeat Simple_repeat 2 27 0 255 210 25 37 chr20 52109954 52110035 -14557970 + HAL1b LINE L1 1267 1346 -2 221 238 0 0 chr20 52110088 52110130 -14557875 + MER5A DNA MER1_type 69 110 -79 226 204 0 0 chr20 52110180 52110224 -14557781 - L3 LINE CR1 -117 1460 1417 655 315 94 17 chr20 52110560 52111027 -14556978 - L2 LINE L2 0 3313 2811 367 268 107 24 chr20 52111042 52111247 -14556758 - L2 LINE L2 -214 3058 2837 201 156 0 0 chr20 52111419 52111451 -14556554 + (CA)n Simple_repeat Simple_repeat 1 32 0 502 268 117 48 chr20 52111806 52112207 -14555798 + Charlie8 DNA MER1_type 1 410 -2007 2072 115 3 10 chr20 52112213 52112527 -14555478 + AluSx SINE Alu 1 312 0 510 284 99 7 chr20 52112658 52112950 -14555055 - L2 LINE L2 -168 3145 2827 267 254 175 9 chr20 52113339 52113453 -14554552 + MIR3 SINE MIR 27 159 -49 492 247 151 12 chr20 52113547 52113713 -14554292 + MIR SINE MIR 14 202 -60 203 0 0 36 chr20 52113840 52113868 -14554137 + (TTAAA)n Simple_repeat Simple_repeat 1 27 0 840 268 155 23 chr20 52113963 52114655 -14553350 + L2 LINE L2 2487 3274 -39 631 202 89 30 chr20 52115415 52115583 -14552422 - MIR SINE MIR -70 192 15 859 142 0 0 chr20 52115753 52115880 -14552125 + FLAM_C SINE Alu 1 127 -16 1689 158 3 53 chr20 52115887 52116210 -14551795 + AluJo SINE Alu 1 307 -5 309 196 0 0 chr20 52116802 52116858 -14551147 + MIR SINE MIR 195 250 -12 755 240 101 9 chr20 52117369 52117586 -14550419 + MIR SINE MIR 20 256 -6 2206 112 0 0 chr20 52117713 52118018 -14549987 + AluSx SINE Alu 1 305 -7 462 244 173 6 chr20 52118041 52118209 -14549796 + MIR SINE MIR 64 259 -3 * 563 220 54 54 chr20 52118176 52118344 -14549661 - MIR3 SINE MIR -19 189 22 300 27 0 0 chr20 52118369 52118406 -14549599 + (CAAA)n Simple_repeat Simple_repeat 1 37 0 566 259 16 95 chr20 52118853 52119096 -14548909 - MIR SINE MIR -25 237 14 1068 111 0 0 chr20 52119188 52119398 -14548607 + (TGGA)n Simple_repeat Simple_repeat 1 210 0 390 42 0 0 chr20 52119416 52119476 -14548529 + (GGAA)n Simple_repeat Simple_repeat 1 108 0 390 42 0 0 chr20 52119476 52119524 -14548481 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 229 230 62 9 chr20 52119707 52119820 -14548185 + (TGGA)n Simple_repeat Simple_repeat 3 121 0 1955 157 33 12 chr20 52119932 52120269 -14547736 + MER2 DNA MER2_type 1 344 0 289 256 5 92 chr20 52120353 52120548 -14547457 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 1636 89 41 20 chr20 52121074 52121320 -14546685 + MER4C LTR ERV1 215 465 0 1458 152 124 72 chr20 52121323 52121685 -14546320 + MER4C-int LTR ERV1 1 381 -6217 2012 125 0 10 chr20 52121685 52121988 -14546017 + AluSx SINE Alu 1 300 -12 2836 128 67 23 chr20 52121989 52122466 -14545539 + MER4B LTR ERV1 77 574 -36 318 153 0 0 chr20 52122497 52122556 -14545449 + (TG)n Simple_repeat Simple_repeat 1 59 0 6258 180 96 78 chr20 52122560 52125118 -14542887 + MER4C-int LTR ERV1 1112 3715 -2883 13824 136 46 40 chr20 52125118 52125752 -14542253 + MER4C-int LTR ERV1 3932 4561 -2037 2070 116 7 7 chr20 52125752 52126053 -14541952 + AluSx SINE Alu 1 301 -11 13824 136 46 40 chr20 52126053 52128068 -14539937 + MER4C-int LTR ERV1 4561 6596 -2 1455 130 0 5 chr20 52128082 52128298 -14539707 + AluJb SINE Alu 11 225 -87 279 79 0 0 chr20 52128318 52128356 -14539649 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 2777 110 86 7 chr20 52128380 52128808 -14539197 + MER4C LTR ERV1 4 465 0 231 108 54 0 chr20 52128808 52128845 -14539160 + L1MB7 LINE L1 5441 5479 -705 1764 165 0 0 chr20 52128870 52129149 -14538856 + AluJb SINE Alu 1 279 -33 3593 171 25 9 chr20 52129159 52129376 -14538629 + L1MB7 LINE L1 5477 5689 -495 2386 166 37 109 chr20 52129376 52129477 -14538528 + MER41C LTR ERV1 1 108 -446 2114 114 3 0 chr20 52129477 52129776 -14538229 - AluSq SINE Alu -13 300 1 2386 166 37 109 chr20 52129776 52130271 -14537734 + MER41C LTR ERV1 108 554 0 3593 171 25 9 chr20 52130271 52130690 -14537315 + L1MB7 LINE L1 5689 6123 -61 2396 75 3 3 chr20 52130690 52130985 -14537020 - AluSg1 SINE Alu -14 295 1 1361 194 12 23 chr20 52131008 52131266 -14536739 - AluJo SINE Alu -57 255 1 691 260 96 17 chr20 52131305 52131792 -14536213 - L2 LINE L2 -187 3126 2590 278 217 14 29 chr20 52131895 52131964 -14536041 + CT-rich Low_complexity Low_complexity 3 70 0 607 300 78 0 chr20 52132372 52132552 -14535453 + MIR SINE MIR 2 195 -67 730 258 49 20 chr20 52132686 52132930 -14535075 - MIR SINE MIR 0 262 12 207 191 265 0 chr20 52133636 52133704 -14534301 + L2 LINE L2 3186 3271 -42 253 314 0 0 chr20 52133742 52133812 -14534193 + MIR SINE MIR 154 223 -39 449 250 229 49 chr20 52134104 52134392 -14533613 - Charlie8 DNA MER1_type -1982 435 96 326 291 92 40 chr20 52134875 52135021 -14532984 + HAL1b LINE L1 1146 1220 -128 2478 72 0 0 chr20 52135021 52135314 -14532691 - AluY SINE Alu -18 293 1 326 291 92 40 chr20 52135314 52135426 -14532579 + HAL1b LINE L1 1220 1325 -23 278 216 167 7 chr20 52135544 52135643 -14532362 + MIR3 SINE MIR 82 171 -37 1901 68 11 42 chr20 52135736 52135999 -14532006 - AluY SINE Alu -12 299 45 1716 189 17 0 chr20 52136150 52136446 -14531559 + AluJo SINE Alu 1 301 -11 392 169 28 0 chr20 52136476 52136547 -14531458 + MIR SINE MIR 87 159 -103 2318 85 0 0 chr20 52136711 52137017 -14530988 + AluSp SINE Alu 1 306 0 1222 214 14 4 chr20 52137520 52137800 -14530205 + L1MD3 LINE L1 7708 7990 -5 180 367 33 17 chr20 52138079 52138199 -14529806 + MIR SINE MIR 31 152 -110 21 0 0 0 chr20 52138708 52138729 -14529276 + GC_rich Low_complexity Low_complexity 1 21 0 222 171 0 0 chr20 52139108 52139149 -14528856 + G-rich Low_complexity Low_complexity 2 42 0 243 293 0 80 chr20 52139286 52139474 -14528531 + G-rich Low_complexity Low_complexity 4 176 0 306 241 35 69 chr20 52139920 52140065 -14527940 + MIR SINE MIR 91 230 -32 591 281 72 39 chr20 52140239 52140640 -14527365 + L2 LINE L2 2774 3182 -131 379 371 46 0 chr20 52140841 52141035 -14526970 + MIR SINE MIR 50 252 -10 481 252 35 35 chr20 52141093 52141236 -14526769 + MIR SINE MIR 117 259 -3 254 269 123 23 chr20 52141398 52141528 -14526477 + MLT1L LTR MaLR 64 206 -409 303 281 52 22 chr20 52141691 52141826 -14526179 + MLT1L LTR MaLR 476 614 -1 205 366 24 0 chr20 52142201 52142283 -14525722 + MIR SINE MIR 74 157 -105 389 289 39 8 chr20 52142812 52142940 -14525065 - MIR SINE MIR -50 212 81 234 281 21 10 chr20 52142992 52143088 -14524917 + L2 LINE L2 2882 2978 -294 265 248 104 89 chr20 52143228 52143308 -14524697 - LTR16B LTR ERVL -151 313 236 2157 119 13 7 chr20 52143308 52143618 -14524387 + AluSx SINE Alu 1 312 0 265 248 104 89 chr20 52143618 52143739 -14524266 - LTR16B LTR ERVL -228 236 109 497 243 37 7 chr20 52144028 52144164 -14523841 - Charlie8 DNA MER1_type -2152 265 126 254 179 0 15 chr20 52144522 52144589 -14523416 + (CA)n Simple_repeat Simple_repeat 1 66 0 687 147 9 0 chr20 52144641 52144750 -14523255 - MER81 DNA DNA -4 110 1 347 282 43 86 chr20 52144874 52145108 -14522897 + MLT1K LTR MaLR 1 224 -325 2058 105 51 7 chr20 52145494 52145789 -14522216 + AluSq SINE Alu 1 308 -5 2264 118 0 0 chr20 52145803 52146099 -14521906 + AluSx SINE Alu 1 296 -16 205 138 0 0 chr20 52146101 52146130 -14521875 + (CAG)n Simple_repeat Simple_repeat 1 29 0 813 109 13 15 chr20 52147731 52147968 -14520037 + AluSq SINE Alu 1 305 -8 2163 126 0 0 chr20 52148252 52148566 -14519439 + AluSx SINE Alu 1 314 0 2193 101 14 0 chr20 52148929 52149215 -14518790 + AluSx SINE Alu 1 290 -22 310 288 219 7 chr20 52149383 52149529 -14518476 + MIR SINE MIR 21 197 -65 984 217 85 33 chr20 52149668 52149940 -14518065 + MLT1K LTR MaLR 293 578 -10 559 287 49 6 chr20 52150122 52150143 -14517862 - MIR SINE MIR -82 180 161 830 249 0 0 chr20 52150143 52150320 -14517685 + MER45A DNA AcHobo 1 177 -1 559 287 49 6 chr20 52150320 52150462 -14517543 - MIR SINE MIR -101 161 10 268 159 29 58 chr20 52150571 52150640 -14517365 - LTR67 LTR ERVL -1 556 490 204 198 108 108 chr20 52150976 52151087 -14516918 - MIR SINE MIR -65 143 33 507 220 69 53 chr20 52151581 52151782 -14516223 + MIR SINE MIR 7 198 -10 647 291 193 0 chr20 52152398 52152693 -14515312 - MLT1K LTR MaLR -111 477 126 856 250 95 60 chr20 52152732 52153021 -14514984 + MLT1H LTR MaLR 24 328 -221 557 227 118 74 chr20 52153131 52153180 -14514825 + MIR SINE MIR 41 86 -176 1411 233 42 42 chr20 52153180 52153677 -14514328 - MLT1D LTR MaLR -4 501 5 557 227 118 74 chr20 52153677 52153830 -14514175 + MIR SINE MIR 86 252 -10 1934 137 0 38 chr20 52153853 52154167 -14513838 + AluJb SINE Alu 1 302 -10 291 301 0 48 chr20 52154183 52154286 -14513719 + L2 LINE L2 3200 3297 -16 297 227 0 0 chr20 52154297 52154363 -14513642 + MIR SINE MIR 69 134 -74 253 326 30 30 chr20 52154741 52154873 -14513132 - MIR3 SINE MIR -47 161 30 212 291 12 23 chr20 52155007 52155093 -14512912 - L2 LINE L2 -518 2796 2712 204 232 42 147 chr20 52155099 52155194 -14512811 + MER5A DNA MER1_type 7 91 -98 639 292 24 0 chr20 52155308 52155517 -14512488 + MIR SINE MIR 47 260 -2 469 269 102 37 chr20 52155800 52155889 -14512116 - MIR SINE MIR -17 245 163 1099 212 9 0 chr20 52155889 52156106 -14511899 - MER20 DNA MER1_type 0 219 1 469 269 102 37 chr20 52156106 52156232 -14511773 - MIR SINE MIR -99 163 16 2276 118 0 28 chr20 52156872 52157193 -14510812 - AluSx SINE Alu 0 312 1 2253 116 0 0 chr20 52157262 52157556 -14510449 + AluSx SINE Alu 1 294 -18 2040 120 39 0 chr20 52157556 52157840 -14510165 + AluSq SINE Alu 1 295 -18 216 67 0 0 chr20 52158302 52158332 -14509673 + (TG)n Simple_repeat Simple_repeat 1 30 0 2359 57 27 17 chr20 52158487 52158784 -14509221 + AluY SINE Alu 1 300 -11 342 330 0 0 chr20 52158844 52158941 -14509064 - MER5A DNA MER1_type -80 109 13 198 300 14 14 chr20 52159093 52159163 -14508842 - MIR3 SINE MIR -8 200 131 234 358 73 0 chr20 52159260 52159383 -14508622 - L1MC/D LINE L1 -1884 5924 5793 958 183 61 15 chr20 52159395 52159592 -14508413 - MER20 DNA MER1_type -10 209 4 606 335 27 0 chr20 52159705 52159929 -14508076 - L2 LINE L2 0 3313 3084 1419 170 4 9 chr20 52160023 52160253 -14507752 + AluJb SINE Alu 60 288 -24 1089 271 99 19 chr20 52160591 52160889 -14507116 + L2 LINE L2 2812 3162 -151 2226 149 47 5 chr20 52160889 52161298 -14506707 + MSTA LTR MaLR 1 426 -2 1089 271 99 19 chr20 52161298 52161464 -14506541 + L2 LINE L2 3162 3313 0 279 0 0 0 chr20 52161532 52161563 -14506442 + (TG)n Simple_repeat Simple_repeat 2 32 0 314 229 109 40 chr20 52161570 52161745 -14506260 + MER113 DNA MER1_type? 42 228 -293 471 198 20 0 chr20 52161894 52161995 -14506010 + MER113 DNA MER1_type? 274 376 -145 309 311 38 0 chr20 52162130 52162236 -14505769 + MIR SINE MIR 127 236 -26 * 737 289 30 13 chr20 52162234 52162469 -14505536 - MIR SINE MIR 0 262 24 707 218 0 6 chr20 52162755 52162934 -14505071 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 730 198 11 0 chr20 52162971 52163148 -14504857 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 341 243 18 0 chr20 52163181 52163292 -14504713 + (TCCA)n Simple_repeat Simple_repeat 4 116 0 351 0 0 0 chr20 52163642 52163681 -14504324 + (TG)n Simple_repeat Simple_repeat 1 39 0 333 0 0 0 chr20 52163680 52163717 -14504288 + (GA)n Simple_repeat Simple_repeat 1 37 0 * 492 273 62 25 chr20 52164282 52164443 -14503562 - MIR SINE MIR -67 195 29 193 304 118 44 chr20 52164669 52164804 -14503201 + L2 LINE L2 3160 3304 -9 271 203 72 4 chr20 52164836 52164924 -14503081 + MIR SINE MIR 51 141 -67 599 211 303 0 chr20 52165085 52165260 -14502745 - Charlie8 DNA MER1_type -2184 233 6 546 321 84 15 chr20 52165815 52166158 -14501847 + L2 LINE L2 2809 3175 -138 1593 228 68 37 chr20 52166165 52166647 -14501358 - MLT1D LTR MaLR -8 497 1 213 211 0 0 chr20 52166709 52166747 -14501258 + L2 LINE L2 3221 3258 -14 2416 89 0 10 chr20 52167537 52167851 -14500154 - AluSq SINE Alu -2 311 1 35 41 0 0 chr20 52167851 52167900 -14500105 + AT_rich Low_complexity Low_complexity 1 49 0 2315 109 3 3 chr20 52167937 52168249 -14499756 - AluSx SINE Alu 0 312 1 1350 272 46 30 chr20 52168276 52168550 -14499455 + L1MC4a LINE L1 5383 5651 -2157 392 0 21 0 chr20 52168550 52168598 -14499407 + (CA)n Simple_repeat Simple_repeat 1 49 0 1350 272 46 30 chr20 52168598 52168634 -14499371 + L1MC4a LINE L1 5651 5685 -2123 1706 164 35 7 chr20 52168634 52168921 -14499084 - AluJo SINE Alu -17 295 1 1350 272 46 30 chr20 52168921 52169150 -14498855 + L1MC4a LINE L1 5685 5932 -1876 21 36 0 0 chr20 52169333 52169361 -14498644 + AT_rich Low_complexity Low_complexity 1 28 0 2543 85 0 0 chr20 52169496 52169803 -14498202 - AluSg1 SINE Alu -2 307 1 814 148 0 0 chr20 52169867 52170028 -14497977 + FLAM_C SINE Alu 1 161 0 187 295 152 9 chr20 52170071 52170176 -14497829 - L2 LINE L2 -685 2629 2510 208 259 0 0 chr20 52170479 52170533 -14497472 + (TAA)n Simple_repeat Simple_repeat 3 56 0 648 165 93 50 chr20 52170537 52170719 -14497286 - MIR SINE MIR -8 254 65 237 241 165 8 chr20 52170962 52171095 -14496910 - MER96 DNA MER1_type? 0 175 22 509 284 102 15 chr20 52171296 52171560 -14496445 + LTR16C LTR ERVL 204 490 -1 1998 108 4 14 chr20 52171659 52171937 -14496068 + AluSq SINE Alu 37 311 -2 572 271 92 45 chr20 52171988 52172302 -14495703 - MLT1K LTR MaLR 0 588 260 346 142 17 175 chr20 52172375 52172427 -14495578 - MER5A DNA MER1_type -80 109 85 1923 166 3 0 chr20 52172427 52172716 -14495289 - AluJo SINE Alu -22 290 1 346 142 17 175 chr20 52172716 52172783 -14495222 - MER5A DNA MER1_type -104 85 9 2396 100 0 0 chr20 52172833 52173132 -14494873 + AluSq SINE Alu 1 299 -14 250 320 167 7 chr20 52173232 52173382 -14494623 - MIR SINE MIR -46 216 43 260 321 43 54 chr20 52173410 52173594 -14494411 - L1MC/D LINE L1 -2051 5757 5576 621 267 28 37 chr20 52173806 52173858 -14494147 - MLT1K LTR MaLR -254 334 283 2024 179 13 15 chr20 52173858 52174249 -14493756 + MLT1B LTR MaLR 1 390 0 621 267 28 37 chr20 52174249 52174413 -14493592 - MLT1K LTR MaLR -305 283 120 1915 179 0 7 chr20 52174472 52174774 -14493231 + AluJb SINE Alu 1 300 -12 2411 82 0 20 chr20 52174846 52175152 -14492853 - AluSx SINE Alu -12 300 1 319 234 178 9 chr20 52175380 52175487 -14492518 + L2 LINE L2 3147 3271 -1 373 269 39 62 chr20 52175627 52175835 -14492170 - L1ME3A LINE L1 0 6170 5968 407 297 38 16 chr20 52175933 52176118 -14491887 - L1MC5 LINE L1 -446 7515 7327 865 111 0 0 chr20 52176521 52176638 -14491367 + AluSg/x SINE Alu 182 298 -14 527 261 38 90 chr20 52176928 52177049 -14490956 - MER113 DNA MER1_type? -83 438 312 2448 77 0 0 chr20 52177049 52177347 -14490658 - AluSc SINE Alu -2 307 10 527 261 38 90 chr20 52177347 52177463 -14490542 - MER113 DNA MER1_type? -209 312 191 2161 123 3 7 chr20 52177463 52177756 -14490249 - AluSx SINE Alu -20 292 1 2282 127 0 0 chr20 52177756 52178064 -14489941 - AluSg SINE Alu -1 309 2 527 261 38 90 chr20 52178064 52178223 -14489782 - MER113 DNA MER1_type? -328 193 61 531 352 17 13 chr20 52178263 52178493 -14489512 + MIR SINE MIR 15 245 -17 520 273 82 41 chr20 52178475 52178669 -14489336 - MIR SINE MIR -59 203 2 * 633 128 0 0 chr20 52178673 52178775 -14489230 + (TCCA)n Simple_repeat Simple_repeat 4 105 0 344 240 80 10 chr20 52178851 52178951 -14489054 + MIR SINE MIR 49 155 -107 293 299 153 23 chr20 52179066 52179327 -14488678 + L2 LINE L2 2819 3113 -159 449 292 0 21 chr20 52179556 52179700 -14488305 + MIR SINE MIR 105 245 -17 393 244 0 0 chr20 52179747 52179833 -14488172 - MER96 DNA MER1_type? 0 175 90 208 231 77 0 chr20 52179919 52179971 -14488034 + MIR SINE MIR 110 165 -97 522 309 52 48 chr20 52180226 52180475 -14487530 - MIR SINE MIR -11 251 2 569 106 21 0 chr20 52180479 52180573 -14487432 + (TCCA)n Simple_repeat Simple_repeat 2 97 0 681 236 34 61 chr20 52180573 52180778 -14487227 - L2 LINE L2 0 3313 3104 1903 138 0 30 chr20 52180778 52181074 -14486931 + AluJo SINE Alu 1 287 -25 2455 80 23 0 chr20 52181074 52181375 -14486630 + AluSx SINE Alu 1 308 -4 681 236 34 61 chr20 52181375 52181431 -14486574 - L2 LINE L2 -207 3106 3058 * 922 261 117 16 chr20 52181429 52181865 -14486140 - L2 LINE L2 -510 2804 2325 464 224 7 53 chr20 52182078 52182230 -14485775 - MER20 DNA MER1_type -59 160 16 188 80 0 0 chr20 52182266 52182291 -14485714 - L2 LINE L2 -19 3294 3270 * 280 276 81 32 chr20 52182275 52182398 -14485607 + L2 LINE L2 2939 3067 -246 1865 132 3 37 chr20 52182445 52182741 -14485264 - AluJb SINE Alu -1 311 26 369 299 71 8 chr20 52182830 52182957 -14485048 - L2 LINE L2 -254 3059 2925 347 267 0 93 chr20 52183318 52183422 -14484583 + MIR SINE MIR 46 158 -104 1967 140 4 0 chr20 52183422 52183701 -14484304 + AluJb SINE Alu 1 280 -32 198 0 0 0 chr20 52183701 52183723 -14484282 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 347 267 0 93 chr20 52183723 52183767 -14484238 + MIR SINE MIR 156 181 -81 285 247 111 68 chr20 52183955 52184110 -14483895 + MIR SINE MIR 24 182 -62 757 217 69 21 chr20 52184345 52184534 -14483471 + MIR SINE MIR 1 198 -64 1161 127 0 0 chr20 52184583 52184741 -14483264 + AluJb SINE Alu 137 294 -18 2420 56 0 7 chr20 52184925 52185244 -14482761 + AluY SINE Alu 1 317 0 317 238 12 12 chr20 52185436 52185516 -14482489 + L2 LINE L2 3193 3272 0 316 333 67 9 chr20 52185609 52185819 -14482186 - L2 LINE L2 -356 2958 2737 198 0 0 0 chr20 52185825 52185847 -14482158 + (TG)n Simple_repeat Simple_repeat 1 22 0 2031 131 0 0 chr20 52185873 52186197 -14481808 - AluJb SINE Alu 0 326 3 597 217 70 25 chr20 52186204 52186361 -14481644 - MIR SINE MIR -72 190 27 723 262 72 18 chr20 52187039 52187260 -14480745 - MIR SINE MIR -6 256 24 327 275 18 28 chr20 52187558 52187667 -14480338 - MIR SINE MIR -63 145 38 2282 125 0 0 chr20 52187730 52188042 -14479963 + AluSx SINE Alu 1 312 0 279 217 33 22 chr20 52188143 52188235 -14479770 + (CACCC)n Simple_repeat Simple_repeat 3 95 0 235 140 77 0 chr20 52188241 52188384 -14479621 + (CACCAT)n Simple_repeat Simple_repeat 1 154 0 384 213 50 7 chr20 52188388 52188529 -14479476 + (CACCC)n Simple_repeat Simple_repeat 3 149 0 260 294 98 27 chr20 52188548 52188732 -14479273 + L2 LINE L2 1814 2010 -1304 1236 277 117 47 chr20 52188762 52189814 -14478191 + L2 LINE L2 2140 3293 -20 552 56 9 47 chr20 52189814 52189921 -14478084 + (TGGA)n Simple_repeat Simple_repeat 1 103 0 1236 277 117 47 chr20 52189921 52189944 -14478061 + L2 LINE L2 3293 3313 0 927 99 5 41 chr20 52189974 52190341 -14477664 + (TGGA)n Simple_repeat Simple_repeat 1 353 0 1086 80 5 35 chr20 52190353 52190791 -14477214 + (TGGA)n Simple_repeat Simple_repeat 1 424 0 722 285 83 6 chr20 52191746 52192058 -14475947 - LTR16A LTR ERVL -7 443 108 939 283 95 59 chr20 52192109 52192833 -14475172 + L2 LINE L2 2550 3313 0 863 280 101 48 chr20 52192849 52193374 -14474631 - L1M4 LINE L1 -2839 3307 2755 221 267 100 11 chr20 52193376 52193466 -14474539 + MIR SINE MIR 65 162 -100 2303 120 0 0 chr20 52193474 52193774 -14474231 + AluSx SINE Alu 2 301 -11 1995 114 85 0 chr20 52193950 52194222 -14473783 + AluSx SINE Alu 2 296 -16 2520 86 0 16 chr20 52194504 52194819 -14473186 + AluSg SINE Alu 1 310 0 1918 158 0 0 chr20 52194859 52195138 -14472867 + AluJb SINE Alu 5 283 -29 193 29 59 0 chr20 52195141 52195175 -14472830 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 442 347 52 6 chr20 52195249 52195422 -14472583 - MIR SINE MIR -12 250 70 273 199 109 154 chr20 52195485 52195641 -14472364 - L2 LINE L2 -2 3311 3163 2223 126 3 0 chr20 52195754 52196063 -14471942 - AluSx SINE Alu 0 312 3 1398 149 157 30 chr20 52196168 52196430 -14471575 - AluJo SINE Alu -7 295 1 639 155 14 78 chr20 52196758 52196900 -14471105 + MER58A DNA MER1_type 30 162 0 1995 185 56 70 chr20 52196929 52196973 -14471032 - MER21A LTR ERV1 -26 905 862 2193 114 3 0 chr20 52196973 52197263 -14470742 - AluSx SINE Alu -21 291 1 1995 185 56 70 chr20 52197263 52197736 -14470269 - MER21A LTR ERV1 -69 862 395 2158 95 0 4 chr20 52197737 52198011 -14469994 - AluSx SINE Alu -8 304 32 295 314 83 8 chr20 52198012 52198133 -14469872 - MIR SINE MIR -60 148 19 2189 77 46 11 chr20 52198595 52198880 -14469125 - AluSq SINE Alu -18 295 1 819 113 26 0 chr20 52199015 52199130 -14468875 - FLAM_C SINE Alu -15 118 1 1576 151 0 20 chr20 52199212 52199463 -14468542 - AluJb SINE Alu -23 289 44 281 281 62 0 chr20 52199487 52199583 -14468422 + L1ME3A LINE L1 6069 6170 0 367 246 22 80 chr20 52199728 52199866 -14468139 + L1ME LINE L1 4884 5013 -1133 1883 158 3 3 chr20 52199961 52200252 -14467753 + AluJb SINE Alu 5 295 -17 306 182 0 0 chr20 52200256 52200322 -14467683 + (TG)n Simple_repeat Simple_repeat 1 66 0 428 298 42 21 chr20 52200322 52200513 -14467492 + L1ME LINE L1 5612 5806 -315 997 228 76 14 chr20 52200544 52200820 -14467185 - L2 LINE L2 -2 3311 3019 1944 146 13 30 chr20 52200988 52201290 -14466715 + AluJb SINE Alu 1 297 -15 226 265 133 0 chr20 52201444 52201527 -14466478 + MIR SINE MIR 8 101 -161 306 191 0 0 chr20 52201568 52201631 -14466374 + MER20 DNA MER1_type 101 163 -56 275 274 0 0 chr20 52201713 52201775 -14466230 + MIR SINE MIR 201 262 0 193 348 45 19 chr20 52202584 52202739 -14465266 + L2 LINE L2 2305 2463 -851 212 380 0 13 chr20 52203189 52203268 -14464737 + L2 LINE L2 3144 3221 -51 204 67 0 0 chr20 52204947 52204977 -14463028 + (CAAA)n Simple_repeat Simple_repeat 3 32 0 189 121 0 0 chr20 52205060 52205093 -14462912 + (CA)n Simple_repeat Simple_repeat 1 33 0 1998 130 7 23 chr20 52205341 52205649 -14462356 + AluJb SINE Alu 1 303 -9 27 0 0 0 chr20 52205987 52206014 -14461991 + GC_rich Low_complexity Low_complexity 1 27 0 317 281 223 0 chr20 52207417 52207538 -14460467 - MIR SINE MIR -48 214 67 261 0 0 0 chr20 52207671 52207700 -14460305 + (CA)n Simple_repeat Simple_repeat 2 30 0 1936 123 38 17 chr20 52208415 52208707 -14459298 + AluSx SINE Alu 1 298 -14 1823 163 10 3 chr20 52208787 52209081 -14458924 - AluJb SINE Alu -16 296 1 327 273 50 0 chr20 52209584 52209705 -14458300 + L1ME4a LINE L1 5718 5844 -277 249 252 230 15 chr20 52209710 52209845 -14458160 - MIR SINE MIR -1 261 98 230 0 33 0 chr20 52210115 52210145 -14457860 + (TG)n Simple_repeat Simple_repeat 2 32 0 866 189 63 0 chr20 52210146 52210305 -14457700 - AluJo SINE Alu -24 288 120 346 192 0 27 chr20 52210314 52210387 -14457618 + Charlie5 DNA MER1_type 2515 2585 -27 2074 170 27 27 chr20 52210720 52211161 -14456844 - L1MB8 LINE L1 -1 6177 5737 2192 103 28 7 chr20 52211608 52211899 -14456106 + AluSg SINE Alu 5 301 -9 251 291 0 25 chr20 52212566 52212645 -14455360 - Charlie8 DNA MER1_type 0 2417 2341 277 333 48 9 chr20 52212807 52212912 -14455093 - MIR SINE MIR -84 124 16 274 260 41 14 chr20 52213761 52213834 -14454171 + L2 LINE L2 3238 3312 -1 2240 112 13 0 chr20 52214686 52214990 -14453015 - AluSx SINE Alu -4 308 1 827 154 0 0 chr20 52215031 52215148 -14452857 - AluJo SINE Alu -184 118 2 183 296 213 0 chr20 52215148 52215256 -14452749 + L2 LINE L2 1163 1293 -2021 680 150 35 9 chr20 52215863 52215976 -14452029 + FLAM_A SINE Alu 5 120 -13 1418 145 45 45 chr20 52216047 52216230 -14451775 + Tigger3(Golem) DNA MER2_type 20 205 -2824 2384 92 0 0 chr20 52216230 52216525 -14451480 + AluSq SINE Alu 1 295 -18 1418 145 45 45 chr20 52216525 52216630 -14451375 + Tigger3(Golem) DNA MER2_type 204 308 -2721 519 118 0 0 chr20 52216633 52216701 -14451304 - AluJ/FRAM SINE Alu -26 286 219 1017 174 0 66 chr20 52216710 52216906 -14451099 + AluJo SINE Alu 44 226 -86 2713 154 47 24 chr20 52216911 52217444 -14450561 + Tigger3(Golem) DNA MER2_type 2485 3029 0 461 313 125 33 chr20 52218057 52218425 -14449580 - HAL1 LINE L1 -6 2501 2100 263 289 99 8 chr20 52218436 52218557 -14449448 - HAL1 LINE L1 -469 2038 1907 595 247 86 28 chr20 52218608 52218899 -14449106 - HAL1 LINE L1 -1212 1295 988 1077 242 214 19 chr20 52218900 52219420 -14448585 - HAL1 LINE L1 -1787 720 100 1980 161 0 3 chr20 52220060 52220364 -14447641 + AluJb SINE Alu 1 303 -9 30 27 0 0 chr20 52221095 52221132 -14446873 + AT_rich Low_complexity Low_complexity 1 37 0 1702 135 0 64 chr20 52221138 52221420 -14446585 + AluSq SINE Alu 39 302 -11 1914 128 46 7 chr20 52221778 52222060 -14445945 + AluSx SINE Alu 1 293 -19 2385 104 0 0 chr20 52222070 52222367 -14445638 + AluSx SINE Alu 1 297 -15 749 228 6 72 chr20 52222494 52222560 -14445445 + MER5B DNA MER1_type 1 70 -108 2181 125 7 0 chr20 52222560 52222863 -14445142 + AluSx SINE Alu 1 305 -7 749 228 6 72 chr20 52222863 52222976 -14445029 + MER5B DNA MER1_type 70 168 -10 1395 139 8 41 chr20 52223835 52224079 -14443926 - MER46A DNA MER2_type 0 236 1 316 239 11 45 chr20 52224182 52224270 -14443735 - L2 LINE L2 0 3272 3188 410 299 147 22 chr20 52224287 52224471 -14443534 + MIR SINE MIR 14 220 -42 1582 176 3 77 chr20 52225588 52225912 -14442093 + AluJb SINE Alu 1 300 -12 2266 101 0 3 chr20 52225915 52226203 -14441802 + AluSq SINE Alu 4 290 -23 2200 126 3 0 chr20 52226412 52226713 -14441292 + AluSq SINE Alu 3 304 -9 2173 166 73 17 chr20 52226742 52227151 -14440854 + MSTB1 LTR MaLR 1 432 0 184 307 109 40 chr20 52229000 52229101 -14438904 + L2 LINE L2 3156 3263 -9 241 239 167 22 chr20 52229433 52229571 -14438434 + MER5A DNA MER1_type 1 158 -31 * 574 243 46 7 chr20 52229459 52229611 -14438394 - MER5A DNA MER1_type -31 158 1 323 204 316 36 chr20 52229640 52229836 -14438169 - MIR SINE MIR -4 258 8 180 330 18 18 chr20 52229847 52229959 -14438046 + L2 LINE L2 2149 2260 -1054 1222 96 162 15 chr20 52230561 52230759 -14437246 - AluSc SINE Alu 0 309 83 336 196 120 0 chr20 52231071 52231163 -14436842 - MER103 DNA DNA -45 121 19 361 307 80 18 chr20 52231301 52231464 -14436541 - L3 LINE CR1 -613 964 792 1401 147 128 37 chr20 52231467 52231740 -14436265 + AluJb SINE Alu 1 298 -14 301 310 71 32 chr20 52231809 52231964 -14436041 - MIR SINE MIR -54 208 48 2274 113 6 3 chr20 52231987 52232298 -14435707 - AluSx SINE Alu 0 312 1 219 241 11 115 chr20 52232414 52232501 -14435504 - L2 LINE L2 -9 3263 3186 488 284 0 16 chr20 52233114 52233241 -14434764 + L2 LINE L2 3175 3299 -14 23 0 0 0 chr20 52233241 52233264 -14434741 + AT_rich Low_complexity Low_complexity 1 23 0 481 200 11 74 chr20 52233529 52233704 -14434301 + L1MC4a LINE L1 5664 5827 -1981 1147 249 105 8 chr20 52233706 52234103 -14433902 + L1ME3A LINE L1 5712 6161 -9 810 203 0 0 chr20 52234321 52234454 -14433551 + FLAM_A SINE Alu 1 133 0 321 26 0 0 chr20 52234454 52234492 -14433513 + (TA)n Simple_repeat Simple_repeat 2 39 0 303 262 47 68 chr20 52234701 52234892 -14433113 + L1MC4 LINE L1 7213 7399 -643 918 184 6 11 chr20 52235006 52235180 -14432825 - AluJo SINE Alu -36 276 104 450 0 0 0 chr20 52235185 52235235 -14432770 + (CA)n Simple_repeat Simple_repeat 2 51 0 1015 237 142 76 chr20 52235263 52235748 -14432257 + L1MC4 LINE L1 7526 8042 0 1582 169 32 14 chr20 52235899 52236183 -14431822 + AluJo SINE Alu 1 289 -23 399 41 0 0 chr20 52236198 52236247 -14431758 + (TAA)n Simple_repeat Simple_repeat 1 49 0 239 293 71 0 chr20 52236348 52236447 -14431558 - L2 LINE L2 0 3313 3208 492 244 198 5 chr20 52237691 52237908 -14430097 - MIR SINE MIR -2 260 2 2355 56 6 37 chr20 52237995 52238316 -14429689 - AluY SINE Alu 0 311 1 848 203 13 0 chr20 52238324 52238477 -14429528 - AluJb SINE Alu -25 287 133 1843 163 3 0 chr20 52239635 52239924 -14428081 - AluJo SINE Alu -22 290 1 249 330 217 0 chr20 52240057 52240172 -14427833 + L2 LINE L2 3129 3268 -4 2338 99 3 0 chr20 52240178 52240480 -14427525 + AluSp SINE Alu 1 303 -10 250 271 10 31 chr20 52240624 52240720 -14427285 + L1MB4 LINE L1 5536 5629 -541 497 168 95 0 chr20 52240791 52240886 -14427119 + MER41B LTR ERV1 444 547 -88 782 200 8 0 chr20 52241195 52241320 -14426685 - FLAM_A SINE Alu -7 126 1 646 251 114 20 chr20 52241519 52241818 -14426187 + L1ME4a LINE L1 5501 5827 -294 2084 134 14 0 chr20 52241860 52242144 -14425861 + AluSx SINE Alu 1 288 -24 341 207 0 0 chr20 52243480 52243538 -14424467 + AluS SINE Alu 2 59 -249 337 231 108 31 chr20 52243653 52243783 -14424222 + L1MC4 LINE L1 7282 7421 -621 250 197 124 109 chr20 52243784 52243863 -14424142 + L1MC5 LINE L1 7289 7372 -589 2322 90 0 0 chr20 52243863 52244153 -14423852 + AluSg SINE Alu 1 290 -20 250 197 124 109 chr20 52244153 52244210 -14423795 + L1MC5 LINE L1 7372 7427 -534 273 88 0 0 chr20 52244395 52244429 -14423576 + U2 snRNA snRNA 1 34 -154 444 252 107 42 chr20 52244449 52244711 -14423294 + L1MC4 LINE L1 7764 8042 0 1976 75 89 65 chr20 52244719 52245011 -14422994 + AluY SINE Alu 1 299 -12 323 136 0 0 chr20 52245223 52245267 -14422738 + FLAM_C SINE Alu 1 44 -95 586 109 0 82 chr20 52245367 52245477 -14422528 + FLAM_C SINE Alu 42 142 -1 234 0 0 0 chr20 52248498 52248524 -14419481 + (ATTG)n Simple_repeat Simple_repeat 2 27 0 2097 115 0 7 chr20 52248524 52248811 -14419194 - AluSx SINE Alu -27 285 1 2039 87 0 35 chr20 52250178 52250467 -14417538 + AluSg SINE Alu 29 307 -3 24 0 0 0 chr20 52251116 52251140 -14416865 + AT_rich Low_complexity Low_complexity 1 24 0 1557 154 32 92 chr20 52251187 52251557 -14416448 + L1MB4 LINE L1 5803 6150 -30 531 71 0 0 chr20 52251564 52251634 -14416371 - MER41A LTR ERV1 -85 469 400 236 105 0 0 chr20 52251634 52251672 -14416333 + L1MB4 LINE L1 6135 6172 -8 1593 179 18 4 chr20 52251729 52252003 -14416002 + AluJo SINE Alu 29 306 -6 1207 237 56 6 chr20 52252155 52252476 -14415529 + L2 LINE L2 2096 2432 -882 774 251 89 68 chr20 52252476 52252577 -14415428 + L2 LINE L2 2650 2747 -566 1833 180 0 0 chr20 52252577 52252882 -14415123 + AluJo SINE Alu 1 305 -7 774 251 89 68 chr20 52252882 52252948 -14415057 + L2 LINE L2 2747 2810 -503 449 286 133 0 chr20 52252948 52253144 -14414861 + MER58A DNA MER1_type 1 222 -2 774 251 89 68 chr20 52253144 52253461 -14414544 + L2 LINE L2 2810 3140 -173 242 167 0 0 chr20 52253479 52253521 -14414484 + L2 LINE L2 3265 3306 -7 1699 152 23 46 chr20 52253575 52253878 -14414127 + AluJo SINE Alu 1 296 -16 507 279 102 28 chr20 52254096 52254149 -14413856 + MIR SINE MIR 6 54 -208 2155 96 6 56 chr20 52254149 52254473 -14413532 - AluSx SINE Alu -4 308 1 507 279 102 28 chr20 52254473 52254622 -14413383 + MIR SINE MIR 54 227 -35 2238 120 0 0 chr20 52254622 52254914 -14413091 + AluSx SINE Alu 1 292 -20 507 279 102 28 chr20 52254914 52254925 -14413080 + MIR SINE MIR 227 236 -26 221 256 146 0 chr20 52254920 52255002 -14413003 + MIR SINE MIR 148 241 -21 * 2147 102 10 3 chr20 52255044 52255337 -14412668 + AluY SINE Alu 1 295 -16 207 256 97 8 chr20 52255549 52255630 -14412375 + MIR SINE MIR 40 124 -84 379 186 0 0 chr20 52255709 52255779 -14412226 - L1MC3 LINE L1 -9 7776 7707 21 0 0 0 chr20 52256406 52256427 -14411578 + AT_rich Low_complexity Low_complexity 1 21 0 1379 200 3 54 chr20 52257368 52257683 -14410322 + AluJo SINE Alu 1 299 -13 1246 165 63 0 chr20 52257795 52258001 -14410004 + MER20 DNA MER1_type 1 219 0 2394 100 0 0 chr20 52258128 52258437 -14409568 + AluSg SINE Alu 2 310 0 29 0 0 0 chr20 52258637 52258666 -14409339 + AT_rich Low_complexity Low_complexity 1 29 0 280 234 13 13 chr20 52259328 52259405 -14408600 + L1M4b LINE L1 1331 1407 -5452 2296 100 7 0 chr20 52259420 52259719 -14408286 + AluSp SINE Alu 1 301 -12 325 229 60 59 chr20 52260237 52260443 -14407562 - L1MC5 LINE L1 -1 8041 7829 529 224 32 0 chr20 52260496 52260621 -14407384 - L1ME2 LINE L1 -48 6116 5988 421 130 0 0 chr20 52260646 52260715 -14407290 - FLAM SINE Alu -11 132 64 1992 151 6 6 chr20 52260757 52261069 -14406936 - AluSx SINE Alu 0 312 1 1227 113 0 0 chr20 52261164 52261324 -14406681 + AluSp SINE Alu 135 294 -19 23 0 0 0 chr20 52261336 52261359 -14406646 + AT_rich Low_complexity Low_complexity 1 23 0 1773 128 44 27 chr20 52261998 52262295 -14405710 + AluJo SINE Alu 1 302 -10 663 222 107 23 chr20 52262409 52262625 -14405380 + L1ME4a LINE L1 5887 6120 -1 1549 108 0 14 chr20 52263029 52263252 -14404753 + AluJo SINE Alu 85 304 -8 202 361 14 0 chr20 52263405 52263477 -14404528 + MIR3 SINE MIR 108 180 -28 2134 146 58 0 chr20 52263638 52263967 -14404038 + MER7A DNA MER2_type 1 346 0 397 253 18 66 chr20 52264093 52264249 -14403756 - MIR SINE MIR -75 133 15 1362 172 73 15 chr20 52265135 52265396 -14402609 + AluJo SINE Alu 3 278 -34 187 81 0 122 chr20 52265400 52265474 -14402531 + (GGAAA)n Simple_repeat Simple_repeat 2 66 0 183 100 0 0 chr20 52265593 52265623 -14402382 + (CA)n Simple_repeat Simple_repeat 2 31 0 326 100 0 0 chr20 52265969 52266019 -14401986 - AluSp/q SINE Alu -7 296 247 367 179 12 36 chr20 52266028 52266112 -14401893 + Charlie3 DNA MER1_type 2625 2706 -4 2193 90 42 0 chr20 52266175 52266464 -14401541 - AluSx SINE Alu -11 301 1 2102 132 0 3 chr20 52268803 52269113 -14398892 + AluSx SINE Alu 1 309 -3 198 0 0 0 chr20 52270131 52270153 -14397852 + (A)n Simple_repeat Simple_repeat 1 22 0 2172 156 61 131 chr20 52270250 52270412 -14397593 - MER44D DNA MER2_type -1882 605 433 1821 128 245 116 chr20 52270412 52271000 -14397005 + MER4A LTR ERV1 1 664 0 2172 156 61 131 chr20 52271000 52271098 -14396907 - MER44D DNA MER2_type -2054 433 330 1558 132 106 15 chr20 52271098 52271363 -14396642 - AluJb SINE Alu -23 289 1 2172 156 61 131 chr20 52271363 52271690 -14396315 - MER44D DNA MER2_type -2157 330 3 228 227 0 0 chr20 52271860 52271904 -14396101 + L2 LINE L2 3182 3225 -47 1888 153 34 0 chr20 52272556 52272851 -14395154 + AluSg SINE Alu 1 305 -5 625 152 121 42 chr20 52273168 52273333 -14394672 + L1M4 LINE L1 5106 5283 -863 1822 169 0 13 chr20 52273336 52273644 -14394361 + AluJb SINE Alu 1 304 -8 2340 61 27 3 chr20 52273655 52273949 -14394056 + AluY SINE Alu 1 301 -10 331 135 87 135 chr20 52273949 52274053 -14393952 + L1MB3 LINE L1 6074 6172 -11 225 244 37 61 chr20 52274189 52274271 -14393734 - L2 LINE L2 -1 3312 3233 1932 148 0 0 chr20 52274370 52274668 -14393337 + AluSx SINE Alu 1 298 -14 2852 16 0 0 chr20 52275201 52275512 -14392493 + AluYa5 SINE Alu 1 311 0 289 195 12 73 chr20 52276465 52276547 -14391458 - MIR3 SINE MIR -7 201 125 2169 89 0 54 chr20 52276661 52276977 -14391028 + AluSq SINE Alu 1 299 -14 227 225 62 38 chr20 52276993 52277073 -14390932 - MIR SINE MIR -29 233 152 1665 168 14 11 chr20 52278392 52278677 -14389328 - AluJb SINE Alu -26 286 1 2074 112 0 53 chr20 52278711 52279034 -14388971 + AluSx SINE Alu 1 306 -6 2131 95 50 0 chr20 52279429 52279712 -14388293 + AluSg SINE Alu 1 297 -13 2257 102 14 0 chr20 52280253 52280548 -14387457 + AluSq SINE Alu 1 299 -14 453 200 0 0 chr20 52281063 52281143 -14386862 + MER116 DNA Mariner 1 80 0 2172 115 0 40 chr20 52281158 52281481 -14386524 - AluSg SINE Alu 0 310 1 1209 146 28 19 chr20 52281646 52281858 -14386147 + AluJo SINE Alu 87 300 -12 546 224 173 33 chr20 52282943 52283157 -14384848 - MIR SINE MIR -13 249 6 334 188 17 34 chr20 52284511 52284628 -14383377 + (CCG)n Simple_repeat Simple_repeat 3 117 0 268 149 0 81 chr20 52284647 52284721 -14383284 + (CGGGGG)n Simple_repeat Simple_repeat 4 71 0 253 67 22 22 chr20 52285009 52285054 -14382951 + (TTCA)n Simple_repeat Simple_repeat 3 47 0 788 272 127 31 chr20 52285057 52285476 -14382529 - L2 LINE L2 -40 3273 2815 337 292 104 47 chr20 52285538 52285730 -14382275 - MIR SINE MIR -59 203 1 700 164 131 38 chr20 52286094 52286277 -14381728 + MIR SINE MIR 28 227 -35 552 308 31 10 chr20 52286345 52286540 -14381465 + MIR SINE MIR 21 219 -43 399 264 54 68 chr20 52286623 52286790 -14381215 - L1MC4 LINE L1 -9 8033 7870 1963 143 0 7 chr20 52286790 52287077 -14380928 + AluJb SINE Alu 17 301 -11 399 264 54 68 chr20 52287077 52287205 -14380800 - L1MC4 LINE L1 -172 7870 7742 2220 115 0 22 chr20 52287333 52287647 -14380358 + AluSx SINE Alu 1 307 -5 1164 132 0 6 chr20 52287647 52287814 -14380191 + AluSg/x SINE Alu 132 297 -13 2192 113 7 0 chr20 52287824 52288125 -14379880 - AluSp SINE Alu -9 304 2 1002 233 70 43 chr20 52288292 52288593 -14379412 + L2 LINE L2 2999 3307 -6 536 315 75 5 chr20 52288906 52289119 -14378886 + MIR SINE MIR 23 250 -12 199 286 36 0 chr20 52289141 52289197 -14378808 - L2 LINE L2 -540 2774 2717 2451 97 0 3 chr20 52289307 52289616 -14378389 + AluSq SINE Alu 1 308 -5 338 255 125 47 chr20 52289639 52289786 -14378219 + MLT1I LTR MaLR 200 367 -42 2288 103 3 0 chr20 52289786 52290078 -14377927 - AluSx SINE Alu -19 293 1 338 255 125 47 chr20 52290078 52290122 -14377883 + MLT1I LTR MaLR 367 406 -3 482 318 39 28 chr20 52290127 52290306 -14377699 - L1ME3 LINE L1 -257 5905 5725 586 191 39 103 chr20 52290316 52290520 -14377485 + MER46C DNA MER2_type 3 193 -145 1257 128 0 11 chr20 52290531 52290718 -14377287 - AluJb SINE Alu 0 312 128 2460 86 3 0 chr20 52290800 52291104 -14376901 - AluSp SINE Alu -8 305 1 317 217 0 14 chr20 52291106 52291175 -14376830 + MER46C DNA MER2_type 268 335 -3 1454 224 184 33 chr20 52291203 52291341 -14376664 + MLT1G1 LTR MaLR 1 117 -478 2228 117 0 40 chr20 52291341 52291666 -14376339 + AluSx SINE Alu 1 312 0 1454 224 184 33 chr20 52291666 52292044 -14375961 + MLT1G1 LTR MaLR 117 595 0 2143 129 0 29 chr20 52292050 52292361 -14375644 - AluSx SINE Alu -10 302 1 294 292 39 24 chr20 52292374 52292601 -14375404 - L1ME3 LINE L1 -555 5615 5461 2137 156 0 6 chr20 52292712 52293033 -14374972 + 7SLRNA srpRNA srpRNA 1 319 -1 1970 119 91 0 chr20 52293047 52293332 -14374673 + AluSq SINE Alu 3 313 0 2114 118 0 59 chr20 52293480 52293802 -14374203 + AluSx SINE Alu 1 303 -9 188 306 0 20 chr20 52293802 52293851 -14374154 - L2 LINE L2 -18 3295 3248 589 334 73 24 chr20 52293968 52294339 -14373666 + MLT1K LTR MaLR 86 474 -114 387 242 16 16 chr20 52294395 52294523 -14373482 - L1ME3A LINE L1 0 6170 6043 248 118 59 15 chr20 52294524 52294592 -14373413 + (TATATG)n Simple_repeat Simple_repeat 1 71 0 2046 158 13 40 chr20 52294598 52294692 -14373313 + MER47A DNA MER2_type 4 99 -2224 2233 117 3 3 chr20 52294692 52294999 -14373006 + AluSx SINE Alu 1 307 -5 2046 158 13 40 chr20 52294999 52295277 -14372728 + MER47A DNA MER2_type 99 366 0 697 242 19 28 chr20 52295277 52295481 -14372524 - L1ME3A LINE L1 -270 5900 5697 937 251 131 62 chr20 52295537 52295972 -14372033 - MLT1K LTR MaLR -114 474 10 2343 91 0 10 chr20 52296144 52296452 -14371553 - AluSx SINE Alu -7 305 1 31 26 0 0 chr20 52296876 52296914 -14371091 + AT_rich Low_complexity Low_complexity 1 38 0 599 214 0 0 chr20 52296914 52297017 -14370988 - FLAM_C SINE Alu -22 121 19 2125 139 3 0 chr20 52297039 52297342 -14370663 + AluSx SINE Alu 1 304 -8 574 181 5 191 chr20 52297366 52297418 -14370587 - MIR SINE MIR -21 241 181 2220 127 0 0 chr20 52297418 52297717 -14370288 + AluSq SINE Alu 1 299 -14 2221 124 3 0 chr20 52297724 52298023 -14369982 + AluSx SINE Alu 3 302 -10 574 181 5 191 chr20 52298023 52298034 -14369971 - MIR SINE MIR -88 174 163 1860 147 3 23 chr20 52298034 52298340 -14369665 + AluSx SINE Alu 1 300 -12 574 181 5 191 chr20 52298340 52298471 -14369534 - MIR SINE MIR -99 163 76 336 280 47 19 chr20 52298543 52298650 -14369355 + L2 LINE L2 3204 3313 0 1616 167 29 14 chr20 52298781 52299056 -14368949 - AluJb SINE Alu -11 301 23 1983 157 10 0 chr20 52299064 52299357 -14368648 - AluSx SINE Alu -16 296 1 819 277 0 0 chr20 52299358 52299546 -14368459 - MER58A DNA MER1_type -32 192 5 2261 121 0 0 chr20 52299636 52299942 -14368063 - AluSx SINE Alu -6 306 1 1938 115 19 0 chr20 52300092 52300353 -14367652 - AluSx SINE Alu -8 304 39 2131 131 0 0 chr20 52300976 52301274 -14366731 + AluSx SINE Alu 1 298 -14 2339 105 0 6 chr20 52301342 52301656 -14366349 - AluSx SINE Alu 0 312 1 1353 153 23 133 chr20 52302040 52302386 -14365619 + AluYb8 SINE Alu 1 308 0 891 191 12 0 chr20 52302400 52302562 -14365443 + FRAM SINE Alu 1 164 -2 2428 86 0 3 chr20 52302636 52302938 -14365067 + AluY SINE Alu 1 301 -10 1907 115 0 0 chr20 52302992 52303244 -14364761 + AluSc SINE Alu 58 309 0 23 0 0 0 chr20 52303244 52303267 -14364738 + AT_rich Low_complexity Low_complexity 1 23 0 2111 131 10 0 chr20 52303288 52303586 -14364419 - AluSx SINE Alu -1 311 11 324 95 0 135 chr20 52303625 52303699 -14364306 - FAM SINE Alu 0 179 116 2973 111 82 48 chr20 52303699 52303852 -14364153 - LTR24C LTR ERV1 -27 608 462 961 178 0 25 chr20 52303852 52304009 -14363996 - FRAM SINE Alu -11 155 3 2973 111 82 48 chr20 52304009 52304253 -14363752 - LTR24C LTR ERV1 -173 462 182 2324 68 6 59 chr20 52304253 52304574 -14363431 - AluSc SINE Alu -5 304 1 2973 111 82 48 chr20 52304574 52304763 -14363242 - LTR24C LTR ERV1 -453 182 1 295 135 19 0 chr20 52304844 52304896 -14363109 - MER4A LTR ERV1 -351 313 261 625 121 0 10 chr20 52304896 52304995 -14363010 - MER4A LTR ERV1 -566 98 1 2304 93 7 23 chr20 52305024 52305334 -14362671 + AluSx SINE Alu 3 307 -5 524 141 30 52 chr20 52305359 52305440 -14362565 + L1MB8 LINE L1 5727 5808 -366 261 0 0 0 chr20 52305440 52305469 -14362536 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1708 195 3 10 chr20 52305474 52305777 -14362228 + AluJb SINE Alu 1 301 -11 524 141 30 52 chr20 52305777 52305824 -14362181 + L1MB8 LINE L1 5812 5858 -316 419 138 0 0 chr20 52305849 52305907 -14362098 - FRAM/FAM SINE Alu -99 77 20 1781 184 3 3 chr20 52305936 52306240 -14361765 - AluJo SINE Alu -8 304 1 1629 133 34 43 chr20 52306248 52306506 -14361499 + L1MB8 LINE L1 5855 6111 -67 2234 108 7 0 chr20 52306506 52306801 -14361204 - AluSx SINE Alu -14 298 2 1629 133 34 43 chr20 52306801 52306864 -14361141 + L1MB8 LINE L1 6111 6173 -5 2461 44 7 10 chr20 52306900 52307197 -14360808 + AluY SINE Alu 1 296 -15 434 281 112 46 chr20 52307199 52307258 -14360747 - L1MC4a LINE L1 -1732 6076 6022 306 0 0 0 chr20 52307258 52307292 -14360713 + (CA)n Simple_repeat Simple_repeat 1 34 0 434 281 112 46 chr20 52307292 52307428 -14360577 - L1MC4a LINE L1 -1786 6022 5868 811 174 0 14 chr20 52307467 52307605 -14360400 - AluJo SINE Alu -176 136 1 1931 168 0 16 chr20 52307623 52307933 -14360072 - AluSx SINE Alu -3 309 5 720 257 231 15 chr20 52307934 52308401 -14359604 - L1MC4a LINE L1 -1984 5824 5257 1061 185 0 0 chr20 52308501 52308674 -14359331 - FRAM SINE Alu -5 171 1 2142 168 3 14 chr20 52308765 52309134 -14358871 - MLT1A1 LTR MaLR 0 365 1 4246 207 126 94 chr20 52309135 52309229 -14358776 - MLT1A1-int LTR MaLR 0 1735 1645 1955 143 3 7 chr20 52309229 52309523 -14358482 + AluSx SINE Alu 15 307 -5 4246 207 126 94 chr20 52309523 52310358 -14357647 - MLT1A1-int LTR MaLR -90 1645 838 2340 111 0 0 chr20 52310358 52310656 -14357349 - AluSx SINE Alu -14 298 1 4246 207 126 94 chr20 52310656 52310773 -14357232 - MLT1A1-int LTR MaLR -897 838 726 1443 219 20 3 chr20 52310773 52311075 -14356930 - AluJo SINE Alu -5 307 1 4246 207 126 94 chr20 52311075 52311153 -14356852 - MLT1A1-int LTR MaLR -1009 726 652 2352 104 0 7 chr20 52311153 52311461 -14356544 - AluSx SINE Alu -6 306 1 4246 207 126 94 chr20 52311461 52311591 -14356414 - MLT1A1-int LTR MaLR -1083 652 528 1586 165 0 0 chr20 52311591 52311834 -14356171 + AluSx SINE Alu 61 303 -9 4246 207 126 94 chr20 52311834 52312095 -14355910 - MLT1A1-int LTR MaLR -1207 528 168 323 167 0 14 chr20 52312095 52312167 -14355838 + CT-rich Low_complexity Low_complexity 4 74 0 1896 169 14 0 chr20 52312174 52312470 -14355535 - AluJb SINE Alu -12 300 1 919 146 0 7 chr20 52312504 52312641 -14355364 + AluJo SINE Alu 1 136 -176 275 296 79 40 chr20 52312666 52312965 -14355040 + L2 LINE L2 2737 3052 -220 550 214 188 34 chr20 52312995 52313229 -14354776 - L2 LINE L2 -411 2903 2634 301 307 114 0 chr20 52313415 52313503 -14354502 + MIR SINE MIR 165 262 0 2335 77 3 27 chr20 52313536 52313836 -14354169 - AluSp SINE Alu -16 297 5 409 244 110 18 chr20 52314078 52314242 -14353763 - MIR3 SINE MIR 0 208 30 2134 144 7 0 chr20 52314270 52314575 -14353430 - AluSx SINE Alu -4 308 2 2107 122 0 32 chr20 52314632 52314943 -14353062 + AluSg SINE Alu 1 301 -9 363 259 95 9 chr20 52315099 52315215 -14352790 + L2 LINE L2 3188 3313 0 903 140 0 28 chr20 52315220 52315363 -14352642 + FLAM_C SINE Alu 1 139 -4 628 239 80 32 chr20 52315437 52315625 -14352380 + MER3 DNA MER1_type 1 197 -12 541 269 6 23 chr20 52315712 52315887 -14352118 - L1MC4a LINE L1 -1897 5911 5740 709 175 0 9 chr20 52315945 52316059 -14351946 - FLAM_C SINE Alu -29 114 2 1238 179 12 56 chr20 52316080 52316111 -14351894 - AluJo SINE Alu -9 303 272 2341 102 14 0 chr20 52316111 52316406 -14351599 + AluSx SINE Alu 1 299 -13 2424 92 0 3 chr20 52316406 52316711 -14351294 + AluSq SINE Alu 1 304 -9 1238 179 12 56 chr20 52316711 52316929 -14351076 - AluJo SINE Alu -38 274 64 2120 153 0 6 chr20 52317071 52317385 -14350620 - AluSx SINE Alu 0 312 1 1909 157 13 10 chr20 52317385 52317683 -14350322 - AluSx SINE Alu -12 300 1 281 241 0 36 chr20 52317714 52317797 -14350208 - MIR SINE MIR 0 262 183 875 158 0 48 chr20 52317808 52317954 -14350051 + FRAM SINE Alu 1 139 -37 1215 170 0 0 chr20 52317954 52318142 -14349863 - AluJb SINE Alu -2 310 123 517 294 37 0 chr20 52318201 52318337 -14349668 - MIR SINE MIR -95 167 27 408 206 68 96 chr20 52319085 52319231 -14348774 + MIR SINE MIR 16 157 -105 961 213 16 29 chr20 52319286 52319530 -14348475 - MER58B DNA MER1_type 0 341 101 2133 154 0 0 chr20 52319531 52319842 -14348163 - AluSx SINE Alu -1 311 1 2651 51 0 16 chr20 52319921 52320236 -14347769 - AluY SINE Alu -1 310 1 554 232 43 29 chr20 52320403 52320541 -14347464 + MIR SINE MIR 2 141 -121 2089 118 9 29 chr20 52320868 52321183 -14346822 + AluJo SINE Alu 1 309 -3 437 264 173 45 chr20 52321226 52321579 -14346426 - MLT1K LTR MaLR -1 587 190 705 130 0 89 chr20 52322435 52322581 -14345424 + AluJb SINE Alu 1 133 -179 21 36 0 0 chr20 52322581 52322609 -14345396 + AT_rich Low_complexity Low_complexity 1 28 0 2099 138 0 10 chr20 52322676 52322988 -14345017 - AluSx SINE Alu -3 309 1 288 242 158 67 chr20 52323111 52323231 -14344774 - L2 LINE L2 0 3272 3142 219 256 94 81 chr20 52323231 52323391 -14344614 - L2 LINE L2 -258 3014 2853 * 708 269 35 40 chr20 52323358 52323585 -14344420 - MIR SINE MIR -9 253 28 340 319 62 9 chr20 52323902 52324015 -14343990 + MIR3 SINE MIR 15 133 -75 218 312 195 0 chr20 52324285 52324362 -14343643 + L2 LINE L2 2267 2358 -956 860 185 74 0 chr20 52324362 52324524 -14343481 - AluJb SINE Alu -6 306 133 1437 146 7 80 chr20 52324654 52324929 -14343076 - AluSx SINE Alu -57 255 1 1232 225 82 63 chr20 52324989 52325275 -14342730 + MER69 DNA AcHobo 2 300 -2226 787 163 0 22 chr20 52325275 52325410 -14342595 - FLAM_A SINE Alu -1 132 1 1232 225 82 63 chr20 52325410 52325550 -14342455 + MER69 DNA AcHobo 300 436 -2090 1846 148 10 39 chr20 52325552 52325863 -14342142 + AluJb SINE Alu 6 307 -5 2595 65 0 3 chr20 52325876 52326186 -14341819 + AluY SINE Alu 1 309 -2 1897 169 3 3 chr20 52326596 52326892 -14341113 - AluSx SINE Alu -16 296 1 411 252 26 0 chr20 52327513 52327628 -14340377 - MER103 DNA DNA -3 163 46 2079 113 0 47 chr20 52327640 52327959 -14340046 + AluSq SINE Alu 1 304 -9 241 209 0 0 chr20 52327973 52328016 -14339989 + MIR SINE MIR 144 186 -76 323 237 68 17 chr20 52328057 52328175 -14339830 - MER46C DNA MER2_type -178 160 37 600 295 16 26 chr20 52328320 52328513 -14339492 - MIR SINE MIR -1 261 71 278 289 0 24 chr20 52328503 52328586 -14339419 + MIR SINE MIR 181 261 -1 * 1931 162 17 0 chr20 52328618 52328914 -14339091 - AluJo SINE Alu -11 301 1 1879 145 78 0 chr20 52328981 52329264 -14338741 + AluSx SINE Alu 1 305 -7 251 322 56 43 chr20 52329493 52329842 -14338163 + LTR16B LTR ERVL 38 462 -2 685 315 73 57 chr20 52329853 52330430 -14337575 + MLT1L LTR MaLR 23 608 -7 1904 119 41 0 chr20 52330628 52330897 -14337108 + AluSx SINE Alu 22 301 -11 5634 111 16 54 chr20 52330932 52331139 -14336866 + MER4D LTR ERV1 1 214 -689 2468 88 0 0 chr20 52331139 52331446 -14336559 + AluSx SINE Alu 1 307 -5 5634 111 16 54 chr20 52331446 52331824 -14336181 + MER4D LTR ERV1 214 539 -364 1742 169 30 3 chr20 52331824 52332126 -14335879 - AluJb SINE Alu -2 310 1 5634 111 16 54 chr20 52332126 52332478 -14335527 + MER4D LTR ERV1 539 903 0 2448 90 0 0 chr20 52332525 52332826 -14335179 - AluSq SINE Alu -12 301 1 366 286 120 17 chr20 52332876 52332978 -14335027 + L2 LINE L2 2804 2894 -419 3195 174 61 21 chr20 52332978 52333097 -14334908 - MER41B LTR ERV1 0 635 522 2243 110 0 22 chr20 52333097 52333416 -14334589 + AluSx SINE Alu 1 312 0 3195 174 61 21 chr20 52333416 52333907 -14334098 - MER41B LTR ERV1 -113 522 1 366 286 120 17 chr20 52333907 52334035 -14333970 + L2 LINE L2 2894 3054 -259 2047 125 34 3 chr20 52334035 52334330 -14333675 - AluSx SINE Alu -8 304 1 2200 116 3 0 chr20 52334477 52334771 -14333234 - AluSx SINE Alu -17 295 1 588 261 124 0 chr20 52334771 52334932 -14333073 + MLT2E LTR ERVL 238 418 -210 2146 129 7 0 chr20 52335024 52335333 -14332672 - AluSx SINE Alu 0 312 2 2289 46 68 7 chr20 52335420 52335701 -14332304 - AluY SINE Alu -12 299 2 200 368 88 44 chr20 52335702 52335816 -14332189 - MIR3 SINE MIR -29 179 61 361 121 0 0 chr20 52335816 52335874 -14332131 + Alu SINE Alu 243 300 -1 667 244 220 72 chr20 52336251 52336405 -14331600 - MLT1L LTR MaLR -8 607 477 3989 111 6 0 chr20 52336405 52336954 -14331051 - MER41A LTR ERV1 0 554 3 667 244 220 72 chr20 52336954 52337298 -14330707 - MLT1L LTR MaLR -138 477 35 465 134 0 49 chr20 52337334 52337416 -14330589 + MADE1 DNA Mariner 2 79 -1 1877 146 25 0 chr20 52337419 52337700 -14330305 - AluJb SINE Alu -16 296 9 1201 294 50 22 chr20 52337900 52338360 -14329645 + MLT1K LTR MaLR 1 473 -3 832 131 46 31 chr20 52338374 52338504 -14329501 + AluJo/FLAM SINE Alu 1 132 -170 2574 78 0 0 chr20 52338505 52338814 -14329191 + AluSc SINE Alu 1 309 0 663 223 173 33 chr20 52339494 52339795 -14328210 - MLT1K LTR MaLR -162 426 84 1587 234 35 23 chr20 52339805 52340025 -14327980 - LTR16C LTR ERVL 0 491 262 1468 185 176 12 chr20 52340025 52340365 -14327640 - MSTD LTR MaLR 0 396 1 1587 234 35 23 chr20 52340365 52340541 -14327464 - LTR16C LTR ERVL -229 262 90 392 264 148 7 chr20 52340731 52340886 -14327119 - MLT1J LTR MaLR -274 237 61 1824 169 3 36 chr20 52340888 52341196 -14326809 + AluJo SINE Alu 1 298 -14 344 260 0 0 chr20 52341426 52341499 -14326506 + MER81 DNA DNA 2 74 -40 1576 120 0 5 chr20 52342235 52342452 -14325553 - AluSg/x SINE Alu 0 312 97 909 188 66 47 chr20 52342458 52342671 -14325334 - MER20 DNA MER1_type -2 217 1 2375 78 0 0 chr20 52342708 52343002 -14325003 + AluY SINE Alu 1 294 -17 1118 175 28 9 chr20 52343380 52343591 -14324414 - MER20 DNA MER1_type 0 219 5 192 40 0 0 chr20 52343628 52343653 -14324352 + (TTA)n Simple_repeat Simple_repeat 2 26 0 2177 115 7 7 chr20 52343655 52343951 -14324054 - AluSx SINE Alu -16 296 1 320 315 41 48 chr20 52344052 52344063 -14323942 + MER5A DNA MER1_type 1 11 -178 2494 92 0 3 chr20 52344063 52344377 -14323628 - AluSq SINE Alu 0 313 1 320 315 41 48 chr20 52344377 52344511 -14323494 + MER5A DNA MER1_type 11 145 -44 846 155 0 0 chr20 52344635 52344751 -14323254 - FLAM_C SINE Alu -17 116 1 468 211 184 9 chr20 52344764 52344878 -14323127 - FAM SINE Alu -51 134 1 304 200 71 0 chr20 52344883 52344953 -14323052 - MIR SINE MIR -115 147 73 2090 133 7 0 chr20 52344957 52345257 -14322748 + AluJb SINE Alu 1 302 -10 2159 130 3 13 chr20 52345260 52345575 -14322430 + AluSx SINE Alu 1 312 0 264 306 0 0 chr20 52345579 52345687 -14322318 + A-rich Low_complexity Low_complexity 1 108 0 198 0 0 0 chr20 52345800 52345822 -14322183 + (CA)n Simple_repeat Simple_repeat 2 23 0 340 294 0 42 chr20 52345849 52345968 -14322037 - MLT1L LTR MaLR -485 130 17 30 0 0 0 chr20 52346620 52346650 -14321355 + AT_rich Low_complexity Low_complexity 1 30 0 1060 114 54 0 chr20 52346694 52346843 -14321162 + AluSg/x SINE Alu 135 291 -19 207 0 0 0 chr20 52346843 52346866 -14321139 + (GA)n Simple_repeat Simple_repeat 2 24 0 348 258 100 70 chr20 52346927 52347156 -14320849 - L2 LINE L2 -223 3049 2814 2251 107 10 7 chr20 52347400 52347709 -14320296 - AluSg SINE Alu 0 310 1 325 308 37 0 chr20 52347893 52348000 -14320005 - MIR SINE MIR -70 192 82 1655 172 0 46 chr20 52348011 52348168 -14319837 - AluJo SINE Alu -23 289 151 1926 144 3 39 chr20 52348168 52348480 -14319525 - AluSx SINE Alu -11 301 1 1655 172 0 46 chr20 52348480 52348625 -14319380 - AluJo SINE Alu -161 151 1 265 162 54 40 chr20 52348655 52348729 -14319276 - MIR SINE MIR -115 147 73 2675 166 16 91 chr20 52348729 52348815 -14319190 + L1MB8 LINE L1 5521 5612 -566 845 135 0 64 chr20 52348815 52348956 -14319049 + FLAM_C SINE Alu 2 133 0 2675 166 16 91 chr20 52348956 52349131 -14318874 + L1MB8 LINE L1 5612 5799 -379 2098 130 0 0 chr20 52349131 52349416 -14318589 - AluSx SINE Alu -27 285 1 2675 166 16 91 chr20 52349416 52349539 -14318466 + L1MB8 LINE L1 5799 5930 -248 2086 94 49 3 chr20 52349539 52349825 -14318180 + AluSg SINE Alu 1 299 -11 2675 166 16 91 chr20 52349825 52350144 -14317861 + L1MB8 LINE L1 5930 6173 -5 2094 123 3 0 chr20 52350177 52350504 -14317501 + AluSp SINE Alu 1 328 0 1988 138 0 0 chr20 52350511 52350820 -14317185 + AluSx SINE Alu 7 315 0 993 307 108 14 chr20 52350922 52351346 -14316659 - MLT1K LTR MaLR -69 519 56 250 263 13 26 chr20 52351378 52351454 -14316551 + MIR SINE MIR 27 101 -161 2254 122 3 3 chr20 52351455 52351767 -14316238 - AluSx SINE Alu 0 312 1 2238 103 0 0 chr20 52351774 52352085 -14315920 - AluSg SINE Alu 0 311 1 2654 61 0 0 chr20 52352163 52352473 -14315532 - AluY SINE Alu -1 310 1 320 253 126 9 chr20 52352554 52352667 -14315338 + MIR3 SINE MIR 28 154 -54 568 265 24 49 chr20 52352898 52353185 -14314820 - L1MC4 LINE L1 -6 8036 7757 * 642 193 158 126 chr20 52353179 52353245 -14314760 - L1MC4 LINE L1 -178 7864 7802 2315 113 3 0 chr20 52353245 52353546 -14314459 + AluSx SINE Alu 1 302 -10 642 193 158 126 chr20 52353546 52353707 -14314298 - L1MC4 LINE L1 -240 7802 7620 2291 125 0 0 chr20 52353707 52354019 -14313986 - AluSx SINE Alu 0 312 1 642 193 158 126 chr20 52354019 52354138 -14313867 - L1MC4 LINE L1 -422 7620 7506 377 256 194 72 chr20 52354153 52354420 -14313585 - MLT1G3 LTR MaLR -83 507 149 2025 147 3 19 chr20 52354430 52354605 -14313400 - AluSx SINE Alu -4 308 139 2227 110 0 3 chr20 52354605 52354896 -14313109 - AluSx SINE Alu -22 290 1 2025 147 3 19 chr20 52354896 52355033 -14312972 - AluSx SINE Alu -173 139 1 333 232 49 0 chr20 52355104 52355186 -14312819 - AluSg/x SINE Alu -94 208 123 301 191 60 71 chr20 52355188 52355272 -14312733 + L1MCa LINE L1 1996 2078 -4348 26 0 0 0 chr20 52355272 52355298 -14312707 + AT_rich Low_complexity Low_complexity 1 26 0 846 152 0 14 chr20 52355298 52355436 -14312569 - AluJo SINE Alu -176 136 1 1040 251 23 36 chr20 52355437 52355629 -14312376 + L2 LINE L2 2971 3159 -154 1872 184 7 0 chr20 52355629 52355933 -14312072 - AluJo SINE Alu -5 307 2 1040 251 23 36 chr20 52355933 52356047 -14311958 + L2 LINE L2 3159 3273 -40 228 100 0 0 chr20 52356053 52356093 -14311912 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 2318 100 13 0 chr20 52356171 52356471 -14311534 + AluSp SINE Alu 1 304 -9 989 188 56 56 chr20 52356854 52357157 -14310848 - L1ME3A LINE L1 -8 6162 5860 1907 105 4 0 chr20 52357280 52357528 -14310477 + AluSx SINE Alu 34 282 -30 353 0 64 0 chr20 52357532 52357579 -14310426 + (TAAAA)n Simple_repeat Simple_repeat 2 51 0 460 287 90 12 chr20 52357592 52357759 -14310246 - MIR SINE MIR -74 188 9 455 336 43 25 chr20 52357769 52358004 -14310001 - MIR SINE MIR 0 262 24 2236 124 0 0 chr20 52358067 52358365 -14309640 + AluSx SINE Alu 11 308 -4 561 250 12 19 chr20 52358445 52358605 -14309400 + MLT1J LTR MaLR 6 164 -347 1552 154 0 28 chr20 52358726 52358973 -14309032 + AluJb SINE Alu 45 284 -28 411 107 19 29 chr20 52358986 52359089 -14308916 + (TCTA)n Simple_repeat Simple_repeat 4 105 0 1036 146 0 41 chr20 52359148 52359319 -14308686 + AluJo SINE Alu 11 174 -138 330 146 0 0 chr20 52359325 52359380 -14308625 + FAM SINE Alu 117 171 -4 25 31 0 0 chr20 52359588 52359620 -14308385 + AT_rich Low_complexity Low_complexity 1 32 0 658 260 78 78 chr20 52359667 52360094 -14307911 + MLT1K LTR MaLR 10 436 -152 2198 128 7 7 chr20 52360094 52360399 -14307606 - AluSx SINE Alu -3 309 5 658 260 78 78 chr20 52360399 52360434 -14307571 + MLT1K LTR MaLR 436 470 -118 1586 241 57 30 chr20 52360434 52360908 -14307097 + LTR16C LTR ERVL 1 487 -4 658 260 78 78 chr20 52360908 52360947 -14307058 + MLT1K LTR MaLR 470 570 -18 207 0 0 0 chr20 52361437 52361460 -14306545 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 2304 101 17 3 chr20 52361537 52361833 -14306172 - AluSx SINE Alu -12 300 1 1717 150 61 10 chr20 52362296 52362590 -14305415 + AluJo SINE Alu 1 309 -3 350 320 59 34 chr20 52362729 52363077 -14304928 - L2 LINE L2 -203 3069 2716 2233 113 3 3 chr20 52363091 52363393 -14304612 - AluSq SINE Alu -11 302 1 272 245 51 61 chr20 52363393 52363485 -14304520 - MIR SINE MIR -8 254 164 581 225 0 31 chr20 52363498 52363627 -14304378 + MIR SINE MIR 87 211 -51 462 232 0 0 chr20 52363644 52363726 -14304279 - MIR SINE MIR -105 157 76 353 290 89 56 chr20 52363957 52364056 -14303949 - L1MC4a LINE L1 -344 5826 5732 890 150 0 0 chr20 52364056 52364189 -14303816 - FLAM_C SINE Alu 0 133 1 2144 87 52 7 chr20 52364198 52364484 -14303521 - AluSx SINE Alu -2 310 12 353 290 89 56 chr20 52364484 52364697 -14303308 - L1MC4a LINE L1 -445 5725 5597 999 202 31 14 chr20 52364773 52364996 -14303009 - MIR SINE MIR -23 239 13 252 333 39 0 chr20 52365005 52365158 -14302847 - L1MC4a LINE L1 -678 5496 5338 1779 179 3 23 chr20 52365272 52365574 -14302431 + AluJo SINE Alu 3 298 -14 638 150 30 0 chr20 52365574 52365674 -14302331 + U6 snRNA snRNA 1 103 -4 835 277 67 0 chr20 52365883 52366107 -14301898 + L2 LINE L2 2831 3069 -244 1768 182 0 0 chr20 52366269 52366565 -14301440 + AluJo SINE Alu 1 296 -16 2303 83 0 3 chr20 52366567 52366893 -14301112 + AluY SINE Alu 1 311 0 2122 120 0 0 chr20 52366901 52367220 -14300785 - AluSx SINE Alu 0 319 1 196 174 72 43 chr20 52367446 52367498 -14300507 + MIR SINE MIR 101 157 -105 2196 139 0 0 chr20 52367498 52367801 -14300204 + AluSx SINE Alu 2 304 -8 196 174 72 43 chr20 52367801 52367817 -14300188 + MIR SINE MIR 157 171 -91 361 221 204 18 chr20 52367890 52368003 -14300002 + MIR SINE MIR 29 162 -100 688 260 107 41 chr20 52368122 52368441 -14299564 - MLT1L LTR MaLR -128 487 148 256 290 151 0 chr20 52368511 52368604 -14299401 + MIR SINE MIR 156 262 0 1682 124 0 0 chr20 52368611 52368844 -14299161 - MER46A DNA MER2_type 0 236 4 1879 142 17 17 chr20 52368848 52369150 -14298855 - AluJb SINE Alu -10 302 1 440 295 103 0 chr20 52369195 52369351 -14298654 + MIR SINE MIR 28 199 -63 1074 226 61 33 chr20 52369405 52369816 -14298189 + MLT1K LTR MaLR 85 564 -24 1621 145 41 48 chr20 52370006 52370296 -14297709 + AluJo SINE Alu 22 309 -3 232 267 122 11 chr20 52370516 52370606 -14297399 + L2 LINE L2 3210 3309 -4 422 66 0 0 chr20 52371071 52371132 -14296873 + AluSp/q SINE Alu 246 306 -7 902 269 56 8 chr20 52371301 52371550 -14296455 - MIR SINE MIR 0 262 2 1306 131 4 80 chr20 52371748 52371985 -14296020 - AluJb SINE Alu -7 305 87 582 242 130 61 chr20 52372092 52372153 -14295852 - MIR SINE MIR -5 257 202 2495 67 6 19 chr20 52372153 52372465 -14295540 + AluSq SINE Alu 1 308 -5 582 242 130 61 chr20 52372465 52372647 -14295358 - MIR SINE MIR -60 202 3 972 266 68 0 chr20 52372749 52373018 -14294987 - MLT1E2 LTR MaLR -50 576 286 2448 65 0 3 chr20 52373018 52373311 -14294694 - AluY SINE Alu -19 292 1 2222 90 26 22 chr20 52373639 52373951 -14294054 + AluSq SINE Alu 1 313 0 1820 173 7 3 chr20 52373964 52374270 -14293735 + AluJb SINE Alu 1 307 -5 182 229 0 0 chr20 52374354 52374389 -14293616 + L2 LINE L2 3269 3303 -10 1437 193 48 0 chr20 52374477 52374767 -14293238 + L1MB7 LINE L1 5863 6166 -18 27 0 0 0 chr20 52374767 52374794 -14293211 + AT_rich Low_complexity Low_complexity 1 27 0 2063 146 7 0 chr20 52374794 52375082 -14292923 - AluSx SINE Alu -20 292 3 732 310 90 12 chr20 52375161 52375547 -14292458 - L2 LINE L2 -204 3109 2686 1978 140 3 40 chr20 52375547 52375869 -14292136 + AluJb SINE Alu 1 310 -2 1784 192 9 3 chr20 52375909 52376243 -14291762 + MER7A DNA MER2_type 13 346 0 1640 157 45 45 chr20 52376595 52376715 -14291290 + AluSx SINE Alu 1 120 -192 2260 100 0 0 chr20 52376715 52377030 -14290975 - AluSc SINE Alu 0 315 1 1640 157 45 45 chr20 52377030 52377220 -14290785 + AluSx SINE Alu 119 312 0 869 130 0 0 chr20 52377220 52377338 -14290667 - AluJb SINE Alu -194 118 1 1148 258 67 35 chr20 52377813 52378244 -14289761 - HAL1 LINE L1 0 2507 2063 1284 125 0 0 chr20 52378246 52378422 -14289583 - AluSg/x SINE Alu -3 307 132 598 153 0 0 chr20 52378546 52378631 -14289374 - AluS SINE Alu -227 86 2 184 261 0 92 chr20 52378733 52378798 -14289207 + L3 LINE CR1 27 85 -1492 2466 83 3 0 chr20 52378865 52379166 -14288839 + AluSp SINE Alu 1 302 -11 1639 206 21 59 chr20 52379207 52379404 -14288601 + MLT1D LTR MaLR 2 205 -300 2197 102 10 0 chr20 52379404 52379697 -14288308 + AluSx SINE Alu 1 296 -16 1639 206 21 59 chr20 52379697 52379975 -14288030 + MLT1D LTR MaLR 205 459 -46 364 209 23 0 chr20 52379962 52380048 -14287957 + MLT2F LTR ERVL 576 663 0 * 2296 99 7 0 chr20 52380102 52380386 -14287619 + AluSx SINE Alu 1 286 -26 2229 110 13 13 chr20 52380396 52380705 -14287300 + AluSc SINE Alu 1 309 0 797 186 93 0 chr20 52380708 52380891 -14287114 + MER58B DNA MER1_type 125 324 -17 372 205 116 0 chr20 52380892 52381004 -14287001 - L2 LINE L2 -256 3057 2933 183 299 31 10 chr20 52381083 52381180 -14286825 - MIR SINE MIR -139 123 25 433 250 233 13 chr20 52381642 52381809 -14286196 + MIR SINE MIR 12 198 -64 693 266 169 32 chr20 52381960 52382238 -14285767 + L2 LINE L2 2430 2745 -569 921 301 146 31 chr20 52382259 52382937 -14285068 - L2 LINE L2 0 3313 2560 237 317 12 0 chr20 52383005 52383087 -14284918 + L2 LINE L2 3189 3271 -1 23 78 0 0 chr20 52383557 52383608 -14284397 + GC_rich Low_complexity Low_complexity 1 51 0 24 53 0 0 chr20 52383727 52383765 -14284240 + GC_rich Low_complexity Low_complexity 1 38 0 271 314 15 51 chr20 52384119 52384256 -14283749 - L2 LINE L2 -6 3307 3176 1005 59 22 15 chr20 52384294 52384430 -14283575 - MER85 DNA T2_type -2 137 1 181 265 15 59 chr20 52384696 52384764 -14283241 + L2 LINE L2 3245 3309 -4 306 310 125 16 chr20 52384955 52385139 -14282866 + MIR SINE MIR 46 249 -13 189 177 167 125 chr20 52385443 52385539 -14282466 - L3 LINE CR1 -90 1487 1388 2044 134 20 0 chr20 52386230 52386522 -14281483 + AluSx SINE Alu 1 298 -14 341 220 0 59 chr20 52386770 52386888 -14281117 + MER113 DNA MER1_type? 6 116 -405 2235 132 0 0 chr20 52386901 52387212 -14280793 + AluSx SINE Alu 1 311 -1 180 336 101 8 chr20 52387215 52387334 -14280671 - MIR3 SINE MIR -48 160 31 186 43 0 0 chr20 52387392 52387415 -14280590 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2369 91 0 0 chr20 52387494 52387791 -14280214 - AluY SINE Alu -14 297 1 2003 90 47 43 chr20 52387809 52388108 -14279897 + AluSq SINE Alu 1 300 -13 21 0 0 0 chr20 52388218 52388239 -14279766 + AT_rich Low_complexity Low_complexity 1 21 0 460 151 14 0 chr20 52388335 52388408 -14279597 + AluJo SINE Alu 62 135 -177 2336 123 0 0 chr20 52389243 52389552 -14278453 - AluSx SINE Alu -1 311 3 3995 169 62 30 chr20 52390335 52390970 -14277035 - L1MB5 LINE L1 -36 6138 5525 2024 132 3 26 chr20 52390970 52391273 -14276732 + AluSx SINE Alu 1 296 -16 3995 169 62 30 chr20 52391273 52391304 -14276701 - L1MB5 LINE L1 -649 5525 5496 2247 109 7 0 chr20 52391304 52391608 -14276397 - AluSx SINE Alu -6 306 1 3995 169 62 30 chr20 52391608 52391863 -14276142 - L1MB5 LINE L1 -678 5496 5188 22 0 0 0 chr20 52392189 52392211 -14275794 + AT_rich Low_complexity Low_complexity 1 22 0 294 286 129 33 chr20 52392701 52392911 -14275094 + MIR SINE MIR 14 243 -19 25 31 0 0 chr20 52393201 52393233 -14274772 + AT_rich Low_complexity Low_complexity 1 32 0 1830 172 0 7 chr20 52393266 52393556 -14274449 + AluJb SINE Alu 1 288 -24 478 284 45 11 chr20 52393941 52394117 -14273888 - MIR SINE MIR 0 262 81 1239 214 84 114 chr20 52395443 52396073 -14271932 + MLT1L LTR MaLR 5 615 0 2012 141 0 7 chr20 52396122 52396427 -14271578 + AluSx SINE Alu 1 303 -9 363 313 77 39 chr20 52396453 52396712 -14271293 - MLT1K LTR MaLR -76 512 244 2247 115 7 0 chr20 52397701 52398005 -14270000 - AluSx SINE Alu -6 306 1 2303 116 0 3 chr20 52398084 52398394 -14269611 + AluSx SINE Alu 1 309 -3 379 123 18 0 chr20 52398759 52398816 -14269189 + U7 snRNA snRNA 5 62 -1 2485 88 0 3 chr20 52398837 52399145 -14268860 - AluSq SINE Alu -6 307 1 974 97 8 0 chr20 52399162 52399286 -14268719 - AluSp SINE Alu -188 125 1 25 31 0 0 chr20 52399286 52399318 -14268687 + AT_rich Low_complexity Low_complexity 1 32 0 2129 126 0 3 chr20 52399319 52399634 -14268371 + AluSx SINE Alu 1 314 0 253 284 11 11 chr20 52399676 52399764 -14268241 + (TATG)n Simple_repeat Simple_repeat 2 89 0 2340 77 7 20 chr20 52400001 52400301 -14267704 + AluY SINE Alu 1 296 -15 372 22 0 0 chr20 52402166 52402211 -14265794 + (TC)n Simple_repeat Simple_repeat 1 45 0 2196 125 0 0 chr20 52403670 52403966 -14264039 - AluSg SINE Alu -13 297 2 249 215 31 0 chr20 52404614 52404679 -14263326 + Charlie7 DNA MER1_type 35 101 -2511 1370 105 0 0 chr20 52404730 52404901 -14263104 + AluSx SINE Alu 1 171 -141 423 0 0 0 chr20 52404903 52404950 -14263055 + (TC)n Simple_repeat Simple_repeat 2 48 0 815 123 0 53 chr20 52404950 52405258 -14262747 + (TA)n Simple_repeat Simple_repeat 1 291 0 536 271 70 78 chr20 52405666 52405950 -14262055 + L1ME LINE L1 5383 5664 -457 243 283 107 0 chr20 52405987 52406100 -14261905 + L1ME LINE L1 5653 5782 -380 1622 123 11 42 chr20 52406117 52406401 -14261604 - L1MB7 LINE L1 -25 6159 5885 3126 160 107 32 chr20 52406401 52406443 -14261562 - L1MB8 LINE L1 -6 6172 6135 2109 100 62 7 chr20 52406443 52406733 -14261272 - AluSx SINE Alu -6 306 1 3126 160 107 32 chr20 52406733 52407106 -14260899 - L1MB8 LINE L1 -43 6135 5688 1943 137 25 0 chr20 52407106 52407390 -14260615 - AluSx SINE Alu -21 291 1 3126 160 107 32 chr20 52407390 52407630 -14260375 - L1MB8 LINE L1 -490 5688 5467 2015 112 8 23 chr20 52407630 52408170 -14259835 + MER4A LTR ERV1 1 664 0 876 136 0 3 chr20 52408170 52408307 -14259698 - L1MB8 LINE L1 -709 5469 5336 2053 105 9 49 chr20 52408307 52408632 -14259373 - AluSx SINE Alu 0 312 1 876 136 0 3 chr20 52408632 52408651 -14259354 - L1MB8 LINE L1 -842 5336 5318 22 0 0 0 chr20 52408773 52408795 -14259210 + AT_rich Low_complexity Low_complexity 1 22 0 218 179 0 0 chr20 52408808 52408847 -14259158 + (CA)n Simple_repeat Simple_repeat 1 39 0 199 232 37 85 chr20 52409587 52409669 -14258336 - MER5B DNA MER1_type -96 82 5 799 100 92 0 chr20 52410142 52410262 -14257743 + MER4B LTR ERV1 440 570 -40 362 309 12 88 chr20 52410749 52410977 -14257028 - MIR SINE MIR -51 211 3 27 0 0 0 chr20 52411336 52411363 -14256642 + AT_rich Low_complexity Low_complexity 1 27 0 988 98 8 8 chr20 52411597 52411730 -14256275 + AluJb SINE Alu 1 133 -179 2079 127 0 19 chr20 52411786 52412093 -14255912 + AluJb SINE Alu 1 301 -11 227 160 80 0 chr20 52412273 52412323 -14255682 + MER113 DNA MER1_type? 65 118 -403 2209 122 0 13 chr20 52412345 52412656 -14255349 - AluSx SINE Alu -3 309 3 837 136 0 30 chr20 52412660 52412792 -14255213 - AluJb SINE Alu -173 139 12 222 62 0 0 chr20 52412804 52412836 -14255169 + (TTTTA)n Simple_repeat Simple_repeat 3 34 0 2144 116 0 0 chr20 52412855 52413131 -14254874 - AluSg SINE Alu -34 276 1 332 302 80 19 chr20 52413214 52413426 -14254579 + MER113 DNA MER1_type? 254 478 -43 1201 236 63 44 chr20 52413484 52413928 -14254077 - MLT1C LTR MaLR -6 453 7 1906 165 88 10 chr20 52414525 52414912 -14253093 + MSTB1 LTR MaLR 1 417 -15 1750 145 0 66 chr20 52415265 52415604 -14252401 + AluJo SINE Alu 1 319 0 189 0 0 0 chr20 52415969 52415990 -14252015 + (CAG)n Simple_repeat Simple_repeat 2 22 0 2266 109 0 13 chr20 52416591 52416902 -14251103 - AluSx SINE Alu -5 307 1 2205 115 0 29 chr20 52417395 52417709 -14250296 + AluSx SINE Alu 1 305 -7 26 30 0 0 chr20 52417730 52417763 -14250242 + AT_rich Low_complexity Low_complexity 1 33 0 219 69 0 0 chr20 52418135 52418164 -14249841 + (T)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr20 52418355 52418376 -14249629 + AT_rich Low_complexity Low_complexity 1 21 0 2202 89 6 51 chr20 52418671 52418987 -14249018 - AluSp SINE Alu -11 302 1 830 261 48 66 chr20 52422871 52423205 -14244800 - MER102a DNA MER1_type -2 328 1 1123 121 12 12 chr20 52423620 52423785 -14244220 - MER4B LTR ERV1 -27 583 419 1727 143 22 7 chr20 52423933 52424205 -14243800 - AluJo SINE Alu -36 276 1 204 283 0 0 chr20 52424387 52424440 -14243565 + CT-rich Low_complexity Low_complexity 2 54 0 280 249 121 48 chr20 52425026 52425315 -14242690 + L2 LINE L2 2810 3119 -194 591 225 115 15 chr20 52425381 52425581 -14242424 + MIR SINE MIR 16 235 -27 1940 126 7 14 chr20 52426563 52426856 -14241149 - AluJo SINE Alu -21 291 1 515 286 24 6 chr20 52426886 52427054 -14240951 - MER5A DNA MER1_type -1 188 18 2455 74 3 0 chr20 52427303 52427602 -14240403 + AluSx SINE Alu 1 300 -12 573 164 320 0 chr20 52427604 52427732 -14240273 + AluJb SINE Alu 134 302 -10 289 226 0 0 chr20 52427854 52427907 -14240098 + FLAM SINE Alu 61 113 -20 2295 116 0 0 chr20 52428199 52428502 -14239503 + AluSx SINE Alu 1 303 -9 327 248 80 8 chr20 52428702 52428827 -14239178 - L1ME4a LINE L1 -3 6118 5985 2313 108 7 0 chr20 52429439 52429746 -14238259 + AluSx SINE Alu 1 309 -3 259 298 29 10 chr20 52430702 52430806 -14237199 + MIR SINE MIR 36 141 -67 291 228 218 0 chr20 52431051 52431152 -14236853 + MER103 DNA DNA 37 159 -7 2169 127 0 13 chr20 52431198 52431506 -14236499 + AluSx SINE Alu 1 304 -8 330 336 0 0 chr20 52431570 52431680 -14236325 - L2 LINE L2 0 3313 3204 1799 162 4 0 chr20 52432045 52432317 -14235688 + AluJb SINE Alu 21 293 -19 419 275 65 106 chr20 52432797 52433022 -14234983 + L2 LINE L2 2813 3009 -263 2407 86 3 0 chr20 52433022 52433323 -14234682 - AluSx SINE Alu -9 303 2 419 275 65 106 chr20 52433323 52433577 -14234428 + L2 LINE L2 3009 3272 0 192 77 0 0 chr20 52433583 52433609 -14234396 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 810 170 0 34 chr20 52434196 52434343 -14233662 + FLAM_C SINE Alu 1 142 -1 441 219 109 0 chr20 52435674 52435802 -14232203 - MLT1K LTR MaLR -2 586 445 427 287 33 13 chr20 52435898 52436048 -14231957 - MIR SINE MIR -94 168 16 216 263 0 0 chr20 52436158 52436215 -14231790 - MIR SINE MIR -53 209 153 990 242 212 5 chr20 52436723 52437329 -14230676 - L1ME1 LINE L1 -5 6230 5517 1699 244 93 78 chr20 52437352 52438374 -14229631 - L1ME1 LINE L1 -4996 1400 364 275 246 18 36 chr20 52438453 52438563 -14229442 - L1ME1 LINE L1 -6206 190 83 402 291 30 15 chr20 52439373 52439507 -14228498 + MIR SINE MIR 8 143 -119 267 320 20 10 chr20 52439602 52439702 -14228303 - MER94 DNA DNA -33 101 1 2276 77 0 18 chr20 52439975 52440285 -14227720 - AluSg1 SINE Alu 0 305 1 2354 107 0 3 chr20 52440315 52440623 -14227382 + AluSc SINE Alu 1 307 -2 332 297 67 29 chr20 52440677 52440886 -14227119 + L1MC4a LINE L1 5679 5895 -1913 756 325 81 24 chr20 52440894 52441312 -14226693 - L2 LINE L2 -2 3311 2870 1822 167 11 3 chr20 52441447 52441763 -14226242 - AluJb SINE Alu 0 318 1 1083 133 0 0 chr20 52442753 52442904 -14225101 + AluSp/q SINE Alu 154 304 -9 2332 82 0 20 chr20 52443221 52443548 -14224457 - AluSg1 SINE Alu 0 309 1 2189 126 3 3 chr20 52443963 52444265 -14223740 + AluJo SINE Alu 1 302 -10 2025 119 58 7 chr20 52444267 52444562 -14223443 + AluSp SINE Alu 1 310 -3 435 255 21 0 chr20 52444636 52444730 -14223275 + MER2 DNA MER2_type 2 97 -248 2060 105 0 46 chr20 52444731 52445036 -14222969 + AluSq SINE Alu 1 291 -22 434 259 30 8 chr20 52445151 52445282 -14222723 - MIR SINE MIR -55 207 74 572 135 62 0 chr20 52445940 52446036 -14221969 + FRAM SINE Alu 1 101 -75 219 114 0 0 chr20 52446038 52446073 -14221932 + (A)n Simple_repeat Simple_repeat 1 35 0 2451 76 0 16 chr20 52446498 52446802 -14221203 - AluY SINE Alu -12 299 1 238 339 69 23 chr20 52446879 52447009 -14220996 - MIR3 SINE MIR -72 136 1 342 310 179 5 chr20 52447080 52447264 -14220741 + L1ME4a LINE L1 5437 5652 -2156 2152 101 0 27 chr20 52447769 52448065 -14219940 + AluSg SINE Alu 1 288 -22 22 0 0 0 chr20 52448840 52448862 -14219143 + AT_rich Low_complexity Low_complexity 1 22 0 313 217 72 100 chr20 52449139 52449319 -14218686 + L1ME4a LINE L1 5913 6087 -34 2297 71 10 20 chr20 52449501 52449798 -14218207 + AluSq SINE Alu 1 294 -19 727 289 43 25 chr20 52450056 52450291 -14217714 + MIR SINE MIR 12 250 -12 2094 81 92 0 chr20 52450306 52450577 -14217428 + AluSx SINE Alu 1 296 -16 1955 163 0 10 chr20 52450742 52451043 -14216962 + AluJo SINE Alu 1 298 -14 194 254 18 0 chr20 52451992 52452047 -14215958 - MIR SINE MIR -150 112 57 198 191 0 0 chr20 52452520 52452562 -14215443 + (TA)n Simple_repeat Simple_repeat 2 43 0 183 100 0 0 chr20 52453762 52453792 -14214213 + (C)n Simple_repeat Simple_repeat 1 30 0 204 335 48 36 chr20 52454120 52454287 -14213718 + MIR SINE MIR 75 243 -19 1087 0 0 34 chr20 52454953 52455101 -14212904 + (CA)n Simple_repeat Simple_repeat 1 143 0 273 238 119 0 chr20 52455995 52456079 -14211926 - MER5A DNA MER1_type -23 166 73 1312 179 0 9 chr20 52456082 52456305 -14211700 - AluJb SINE Alu -5 307 87 368 192 0 0 chr20 52456306 52456379 -14211626 - MER5A DNA MER1_type -114 75 3 284 311 52 15 chr20 52456425 52456560 -14211445 - MIR SINE MIR -14 248 109 711 212 48 48 chr20 52456617 52456806 -14211199 + MER5A DNA MER1_type 1 189 0 205 169 0 51 chr20 52456824 52456883 -14211122 + C-rich Low_complexity Low_complexity 3 58 0 258 317 33 33 chr20 52457201 52457321 -14210684 - MER5B DNA MER1_type 0 178 59 268 356 62 0 chr20 52458216 52458376 -14209629 - MIR SINE MIR -90 172 3 925 291 112 32 chr20 52465103 52465269 -14202736 + MLT1L LTR MaLR 48 199 -416 291 71 0 0 chr20 52465269 52465311 -14202694 + (CAAAA)n Simple_repeat Simple_repeat 3 44 0 2164 82 0 21 chr20 52465311 52465591 -14202414 - AluSx SINE Alu -38 274 1 925 291 112 32 chr20 52465591 52465922 -14202083 + MLT1L LTR MaLR 198 586 -29 449 285 69 58 chr20 52465931 52466103 -14201902 + L1ME4a LINE L1 5854 6031 -90 2328 108 3 0 chr20 52466103 52466400 -14201605 - AluSq SINE Alu -15 298 1 449 285 69 58 chr20 52466400 52466487 -14201518 + L1ME4a LINE L1 6031 6116 -5 579 231 0 0 chr20 52466639 52466756 -14201249 + MER58 DNA MER1_type 1 117 -224 1671 158 68 14 chr20 52466760 52467039 -14200966 + AluJo SINE Alu 1 294 -18 1231 177 30 13 chr20 52467043 52467280 -14200725 - L1MD2 LINE L1 -37 6322 6082 644 232 52 72 chr20 52467278 52467528 -14200477 + L1MC5 LINE L1 7103 7347 -614 * 4842 206 76 24 chr20 52467544 52468102 -14199903 + L1M3 LINE L1 3931 4459 -1687 1709 171 17 10 chr20 52468102 52468400 -14199605 + AluJo SINE Alu 1 300 -12 4842 206 76 24 chr20 52468400 52468993 -14199012 + L1M3 LINE L1 4459 5163 -983 2517 95 0 0 chr20 52468993 52469297 -14198708 - AluSx SINE Alu -8 304 1 4842 206 76 24 chr20 52469297 52469476 -14198529 + L1M3 LINE L1 5163 5331 -815 860 130 14 29 chr20 52469476 52469614 -14198391 + AluJo SINE Alu 1 136 -176 1342 141 25 35 chr20 52469614 52469862 -14198143 + L1M3 LINE L1 5319 5421 -750 1926 158 0 13 chr20 52469862 52470160 -14197845 + AluJb SINE Alu 1 294 -18 1342 141 25 35 chr20 52470160 52470302 -14197703 + L1M3 LINE L1 5421 5563 -608 418 234 84 64 chr20 52470574 52470670 -14197335 + L1MC5 LINE L1 7407 7500 -461 1541 158 83 37 chr20 52470670 52471019 -14196986 - MLT1A1 LTR MaLR 0 365 1 418 234 84 64 chr20 52471019 52471209 -14196796 + L1MC5 LINE L1 7500 7881 -80 1267 154 50 5 chr20 52471216 52471436 -14196569 - AluJo SINE Alu -1 311 82 2649 56 0 0 chr20 52471480 52471784 -14196221 + AluY SINE Alu 1 304 -7 945 228 120 26 chr20 52471788 52472205 -14195800 - MLT1J LTR MaLR -55 456 1 2292 114 7 3 chr20 52472712 52473018 -14194987 - AluSq SINE Alu -6 307 1 243 197 113 0 chr20 52473020 52473091 -14194914 + MER113 DNA MER1_type? 123 201 -320 326 285 81 6 chr20 52473141 52473313 -14194692 + MER113 DNA MER1_type? 334 518 -3 309 350 0 0 chr20 52473315 52473415 -14194590 + MIR SINE MIR 105 204 -58 1266 181 59 13 chr20 52473435 52473673 -14194332 + AluJb SINE Alu 51 299 -13 2145 84 42 36 chr20 52473676 52473984 -14194021 + AluY SINE Alu 1 310 -1 21 0 0 0 chr20 52474172 52474193 -14193812 + AT_rich Low_complexity Low_complexity 1 21 0 453 19 0 0 chr20 52474662 52474716 -14193289 + (TA)n Simple_repeat Simple_repeat 2 55 0 21 0 0 0 chr20 52475600 52475621 -14192384 + AT_rich Low_complexity Low_complexity 1 21 0 242 0 61 0 chr20 52476068 52476101 -14191904 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 2317 89 0 0 chr20 52477830 52478121 -14189884 - AluSg SINE Alu -18 292 2 342 295 98 44 chr20 52478437 52478732 -14189273 + L2 LINE L2 2537 2847 -467 210 262 48 87 chr20 52479770 52479795 -14188210 - MIR SINE MIR -54 208 184 2344 96 0 0 chr20 52479795 52480086 -14187919 - AluSx SINE Alu -21 291 1 210 262 48 87 chr20 52480086 52480186 -14187819 - MIR SINE MIR -78 184 88 889 129 8 0 chr20 52480187 52480319 -14187686 + AluJb SINE Alu 1 133 -179 372 257 9 29 chr20 52480332 52480437 -14187568 - MIR SINE MIR -157 105 3 195 328 82 41 chr20 52480439 52480683 -14187322 - L2 LINE L2 -381 2933 2680 378 310 75 5 chr20 52480935 52481122 -14186883 + MIR SINE MIR 16 215 -47 896 150 0 0 chr20 52481696 52481829 -14186176 + FLAM_C SINE Alu 1 133 -10 189 196 196 0 chr20 52481861 52481917 -14186088 + L2 LINE L2 2999 3065 -248 303 253 189 0 chr20 52482046 52482141 -14185864 + L2 LINE L2 3157 3269 -3 2320 102 0 9 chr20 52482145 52482460 -14185545 + AluSx SINE Alu 1 312 0 21 82 0 0 chr20 52482883 52482932 -14185073 + AT_rich Low_complexity Low_complexity 1 49 0 1960 129 31 3 chr20 52482935 52483222 -14184783 + AluSq SINE Alu 1 295 -18 1322 152 0 28 chr20 52483663 52483874 -14184131 + AluJo SINE Alu 80 284 -28 338 264 33 0 chr20 52483902 52483993 -14184012 - MIR SINE MIR -7 255 162 355 288 39 10 chr20 52484219 52484342 -14183663 - MIR SINE MIR -77 131 4 194 28 0 83 chr20 52484794 52484830 -14183175 + (A)n Simple_repeat Simple_repeat 1 33 0 358 272 190 0 chr20 52485630 52485788 -14182217 - MIR SINE MIR 0 262 75 590 189 9 0 chr20 52486847 52486953 -14181052 + MIR SINE MIR 46 152 -110 930 113 0 0 chr20 52486954 52487087 -14180918 + FLAM_A SINE Alu 1 133 0 311 100 0 0 chr20 52487087 52487146 -14180859 + Alu SINE Alu 2 44 -258 181 308 77 13 chr20 52487193 52487271 -14180734 + L2 LINE L2 3188 3270 -2 2487 81 0 0 chr20 52487753 52488060 -14179945 - AluY SINE Alu -4 307 1 264 268 202 27 chr20 52488337 52488520 -14179485 + L1MC4 LINE L1 5609 5823 -1985 2331 77 3 39 chr20 52488525 52488837 -14179168 + AluY SINE Alu 1 301 -10 374 319 14 50 chr20 52488904 52489045 -14178960 + L2 LINE L2 3125 3260 -12 391 279 3 171 chr20 52489054 52489097 -14178908 - L2 LINE L2 -16 3256 3207 1885 154 0 13 chr20 52489097 52489395 -14178610 - AluJo SINE Alu -14 298 5 391 279 3 171 chr20 52489395 52489656 -14178349 - L2 LINE L2 -65 3207 3003 1943 156 0 9 chr20 52489748 52490063 -14177942 + AluSx SINE Alu 1 312 0 194 339 0 17 chr20 52490162 52490221 -14177784 + L2 LINE L2 3256 3313 0 1680 210 17 0 chr20 52490324 52490624 -14177381 - AluJo SINE Alu -7 305 1 22 35 0 0 chr20 52490634 52490663 -14177342 + AT_rich Low_complexity Low_complexity 1 29 0 1350 192 83 29 chr20 52490665 52491040 -14176965 + L1MC4 LINE L1 6688 7082 -960 2028 118 42 14 chr20 52491051 52491340 -14176665 + AluSx SINE Alu 3 299 -13 659 105 42 0 chr20 52491363 52491458 -14176547 - HY3 scRNA scRNA -2 99 1 1670 105 43 118 chr20 52491911 52492179 -14175826 - AluJb SINE Alu 0 326 81 7442 49 4 40 chr20 52492179 52493914 -14174091 + SVA Other Other 1 1400 0 1670 105 43 118 chr20 52493914 52493990 -14174015 - AluJb SINE Alu -245 81 1 565 301 0 0 chr20 52493995 52494141 -14173864 + MIR SINE MIR 107 252 -10 2404 92 3 0 chr20 52494627 52494932 -14173073 + AluSx SINE Alu 1 306 -6 853 221 99 19 chr20 52495069 52495282 -14172723 + MIR SINE MIR 29 258 -4 1656 199 3 13 chr20 52495418 52495725 -14172280 + AluJo SINE Alu 1 304 -8 391 113 56 0 chr20 52495741 52495812 -14172193 + L1MB4 LINE L1 5258 5332 -848 930 163 0 0 chr20 52495813 52495948 -14172057 + AluSq/x SINE Alu 1 135 -178 2149 122 0 52 chr20 52495948 52496077 -14171928 + AluSx SINE Alu 1 135 -177 2285 120 0 0 chr20 52496077 52496378 -14171627 + AluSq SINE Alu 3 303 -10 2149 122 0 52 chr20 52496378 52496575 -14171430 + AluSx SINE Alu 135 310 -2 4685 152 22 11 chr20 52496575 52497423 -14170582 + L1MB4 LINE L1 5323 6180 0 2044 114 3 46 chr20 52497434 52497741 -14170264 + AluSx SINE Alu 1 294 -18 2099 133 7 7 chr20 52497747 52498055 -14169950 + AluSx SINE Alu 1 308 -4 927 186 113 70 chr20 52498055 52498313 -14169692 + L1ME LINE L1 5327 5601 -563 2287 96 14 0 chr20 52498313 52498640 -14169365 + AluSq SINE Alu 1 313 0 927 186 113 70 chr20 52498640 52498682 -14169323 + L1ME LINE L1 5601 5640 -524 843 191 23 14 chr20 52498684 52498904 -14169101 - Charlie7 DNA MER1_type -1879 733 512 2270 97 0 13 chr20 52498978 52499286 -14168719 - AluSx SINE Alu -8 304 1 213 281 188 0 chr20 52499344 52499408 -14168597 + L2 LINE L2 3234 3309 -4 22 0 0 0 chr20 52499458 52499480 -14168525 + AT_rich Low_complexity Low_complexity 1 22 0 1476 190 59 7 chr20 52499867 52500157 -14167848 - AluJo SINE Alu -7 305 1 782 155 0 0 chr20 52500324 52500440 -14167565 - FLAM_C SINE Alu -15 118 3 2392 80 7 7 chr20 52500499 52500800 -14167205 + AluSx SINE Alu 1 301 -11 793 140 0 0 chr20 52500809 52500923 -14167082 - MER81 DNA DNA 0 114 1 27 0 0 65 chr20 52500997 52501019 -14166986 + AT_rich Low_complexity Low_complexity 1 20 -23 2330 107 0 0 chr20 52501019 52501309 -14166696 + AluSx SINE Alu 1 290 -22 27 0 0 65 chr20 52501309 52501332 -14166673 + AT_rich Low_complexity Low_complexity 20 43 0 521 244 0 24 chr20 52501356 52501479 -14166526 - L2 LINE L2 -4 3309 3190 737 167 8 0 chr20 52501613 52501745 -14166260 + MER3 DNA MER1_type 1 133 -76 2281 103 0 7 chr20 52501748 52502058 -14165947 - AluY SINE Alu -3 308 1 1883 160 27 10 chr20 52502058 52502358 -14165647 - AluJo SINE Alu -6 306 2 1367 162 53 20 chr20 52502363 52502610 -14165395 - AluJo SINE Alu -8 304 50 734 127 0 153 chr20 52502610 52502767 -14165238 - AluJo SINE Alu -178 134 2 1943 153 3 0 chr20 52502802 52503090 -14164915 + AluJb SINE Alu 11 299 -13 1604 138 0 0 chr20 52503090 52503313 -14164692 + AluJb SINE Alu 87 310 -2 573 120 0 0 chr20 52503322 52503414 -14164591 + (GGAA)n Simple_repeat Simple_repeat 1 92 0 2459 61 3 10 chr20 52503421 52503718 -14164287 + AluY SINE Alu 1 295 -16 2113 121 7 0 chr20 52503733 52504022 -14163983 - AluSq SINE Alu -22 291 1 1751 231 54 36 chr20 52504040 52504195 -14163810 + L1 LINE L1 2203 2354 -3792 2258 129 0 0 chr20 52504195 52504497 -14163508 + AluSx SINE Alu 1 302 -10 1751 231 54 36 chr20 52504497 52504895 -14163110 + L1 LINE L1 2354 2766 -3380 844 153 0 0 chr20 52504904 52505028 -14162977 + FLAM_C SINE Alu 1 124 -19 224 119 0 24 chr20 52505035 52505077 -14162928 + (GAAA)n Simple_repeat Simple_repeat 3 43 0 242 254 0 0 chr20 52505086 52505141 -14162864 + L1 LINE L1 2770 2824 -3322 515 193 34 136 chr20 52505152 52505281 -14162724 + L1 LINE L1 2805 2895 -3251 2208 116 0 0 chr20 52505281 52505575 -14162430 + AluSx SINE Alu 1 294 -18 515 193 34 136 chr20 52505575 52505710 -14162295 + L1 LINE L1 2895 3042 -3104 * 518 142 77 118 chr20 52505693 52505862 -14162143 + L1MB3 LINE L1 5943 6104 -79 1810 75 0 0 chr20 52505882 52506110 -14161895 - AluY SINE Alu 0 311 84 1875 141 3 47 chr20 52506112 52506432 -14161573 - AluSq SINE Alu -7 306 1 1422 128 3 157 chr20 52506517 52506890 -14161115 + AluJo SINE Alu 1 302 0 318 265 291 35 chr20 52509708 52510055 -14157950 + L2 LINE L2 2819 3254 -59 2296 119 3 0 chr20 52510536 52510847 -14157158 + AluSx SINE Alu 1 312 0 658 124 0 9 chr20 52511059 52511164 -14156841 - U13 snRNA snRNA 0 104 1 2490 50 3 13 chr20 52511176 52511476 -14156529 - AluY SINE Alu -14 297 1 1887 95 76 0 chr20 52511540 52511802 -14156203 - AluSg SINE Alu -28 282 1 306 323 75 0 chr20 52511892 52512025 -14155980 - MIR SINE MIR -1 261 119 1783 148 32 3 chr20 52512746 52513030 -14154975 + AluJo SINE Alu 1 292 -20 1896 162 0 3 chr20 52513304 52513600 -14154405 + AluJb SINE Alu 1 295 -17 1122 202 123 29 chr20 52513978 52514255 -14153750 + AluJo SINE Alu 1 303 -9 2033 105 20 99 chr20 52514412 52514597 -14153408 - AluYb8 SINE Alu -2 316 169 291 54 0 0 chr20 52514597 52514634 -14153371 + (CA)n Simple_repeat Simple_repeat 2 38 0 2033 105 20 99 chr20 52514634 52514791 -14153214 - AluYb8 SINE Alu -149 169 1 1575 181 30 10 chr20 52514823 52515126 -14152879 - AluJb SINE Alu -3 309 1 2332 105 0 13 chr20 52515362 52515668 -14152337 + AluSx SINE Alu 1 302 -10 2311 100 3 3 chr20 52516430 52516729 -14151276 - AluSx SINE Alu -13 299 1 849 228 43 83 chr20 52517060 52517411 -14150594 - L1MC4 LINE L1 -19 8023 7687 2166 106 4 0 chr20 52517701 52517976 -14150029 + AluSq SINE Alu 1 276 -37 207 0 0 0 chr20 52517977 52518000 -14150005 + (C)n Simple_repeat Simple_repeat 1 23 0 2723 32 3 0 chr20 52518543 52518853 -14149152 - AluY SINE Alu 0 311 1 2254 108 3 23 chr20 52519193 52519500 -14148505 - AluSx SINE Alu -11 301 1 2251 96 0 0 chr20 52520425 52520706 -14147299 - AluSg SINE Alu -29 281 1 2214 92 17 7 chr20 52520733 52521026 -14146979 + AluSx SINE Alu 1 296 -16 1932 158 3 13 chr20 52521166 52521469 -14146536 + AluJb SINE Alu 6 305 -7 238 284 142 59 chr20 52522260 52522361 -14145644 - MIR SINE MIR -19 243 152 2358 91 7 3 chr20 52522361 52522657 -14145348 + AluSc SINE Alu 1 297 -12 238 284 142 59 chr20 52522657 52522759 -14145246 - MIR SINE MIR -110 152 23 239 290 164 22 chr20 52524984 52525167 -14142838 + MIR SINE MIR 44 252 -10 723 137 46 30 chr20 52525206 52525337 -14142668 - FLAM_C SINE Alu 0 133 1 2136 108 24 0 chr20 52525346 52525643 -14142362 - AluSq SINE Alu -9 304 1 795 253 107 41 chr20 52525913 52526374 -14141631 - L2 LINE L2 -276 3037 2545 1823 138 7 4 chr20 52526388 52526657 -14141348 - AluJb SINE Alu -14 298 29 1768 84 9 0 chr20 52526661 52526888 -14141117 + AluSp SINE Alu 67 295 -18 194 299 62 72 chr20 52526888 52527082 -14140923 + L2 LINE L2 2326 2517 -797 2079 139 3 0 chr20 52527155 52527457 -14140548 + AluSx SINE Alu 1 303 -9 328 286 76 62 chr20 52528884 52528910 -14139095 + L2 LINE L2 2554 2578 -736 2543 54 0 0 chr20 52528910 52529207 -14138798 - AluY SINE Alu -14 297 1 328 286 76 62 chr20 52529207 52529470 -14138535 + L2 LINE L2 2578 2847 -467 1173 119 51 75 chr20 52529560 52529681 -14138324 + MER65A LTR ERV1 40 162 -283 2290 107 7 0 chr20 52529681 52529980 -14138025 - AluSq SINE Alu -12 301 1 1173 119 51 75 chr20 52529980 52530111 -14137894 + MER65A LTR ERV1 162 286 -159 816 150 0 8 chr20 52530111 52530238 -14137767 + AluJo SINE Alu 2 127 -175 1670 170 55 7 chr20 52530255 52530544 -14137461 + AluJb SINE Alu 1 303 -9 1027 161 12 0 chr20 52530639 52530801 -14137204 + AluJo SINE Alu 135 298 -14 794 115 23 0 chr20 52530802 52530932 -14137073 + MER65A LTR ERV1 313 445 0 329 252 16 32 chr20 52530977 52531100 -14136905 + MER65A-int LTR ERV1 48 168 -4703 1987 136 10 29 chr20 52531106 52531416 -14136589 - AluJo SINE Alu -8 304 1 987 206 43 49 chr20 52531417 52531428 -14136577 + MER31-int LTR ERV1 1706 1716 -4960 2430 76 7 3 chr20 52531428 52531731 -14136274 - AluY SINE Alu -7 304 1 987 206 43 49 chr20 52531731 52531812 -14136193 + MER31-int LTR ERV1 1716 1796 -4880 2471 97 0 0 chr20 52531812 52532122 -14135883 + AluSx SINE Alu 1 310 -2 987 206 43 49 chr20 52532122 52532500 -14135505 + MER31-int LTR ERV1 1796 4065 -2611 2567 64 0 3 chr20 52532527 52532838 -14135167 - AluY SINE Alu -1 310 1 1699 131 6 89 chr20 52532844 52533022 -14134983 - AluSx SINE Alu 0 312 173 2095 98 56 0 chr20 52533022 52533307 -14134698 - AluSx SINE Alu -10 302 2 1699 131 6 89 chr20 52533307 52533464 -14134541 - AluSx SINE Alu -139 173 5 511 228 69 41 chr20 52533469 52533731 -14134274 + MER31-int LTR ERV1 2493 3023 -1913 2516 57 0 10 chr20 52533780 52534079 -14133926 - AluY SINE Alu -15 296 1 2233 103 3 7 chr20 52534084 52534384 -14133621 - AluSg SINE Alu -11 299 1 1160 150 44 6 chr20 52534491 52534671 -14133334 + AluJo SINE Alu 1 187 -125 276 95 0 0 chr20 52534676 52534718 -14133287 + MER65A LTR ERV1 404 445 0 2320 89 6 13 chr20 52534764 52535077 -14132928 - AluSp SINE Alu -2 311 1 890 157 30 36 chr20 52535185 52535351 -14132654 - AluJb SINE Alu -14 298 134 463 171 11 0 chr20 52535436 52535524 -14132481 - MER53 DNA DNA -100 89 1 202 171 57 0 chr20 52535542 52535577 -14132428 - L2 LINE L2 -12 3260 3224 280 256 189 0 chr20 52535620 52535710 -14132295 + L2 LINE L2 3158 3264 -8 240 205 31 91 chr20 52536233 52536350 -14131655 - MIR SINE MIR -68 140 55 444 192 279 6 chr20 52536423 52536578 -14131427 + MIR SINE MIR 63 257 -5 343 248 102 44 chr20 52536687 52536824 -14131181 - MER5B DNA MER1_type -1 177 33 2326 87 3 7 chr20 52536880 52537178 -14130827 + AluSc SINE Alu 5 301 -8 1930 130 17 13 chr20 52537322 52537621 -14130384 + AluJb SINE Alu 1 300 -12 885 246 162 55 chr20 52537627 52538215 -14129790 + L1MC4 LINE L1 7181 7711 -97 255 229 0 0 chr20 52538478 52538539 -14129466 + (TATG)n Simple_repeat Simple_repeat 4 64 0 268 305 151 47 chr20 52538540 52538566 -14129439 - L1ME4a LINE L1 -157 5964 5942 1942 93 7 55 chr20 52538566 52538876 -14129129 - AluSx SINE Alu -17 295 1 268 305 151 47 chr20 52538876 52539167 -14128838 - L1ME4a LINE L1 -179 5942 5614 199 198 0 42 chr20 52539214 52539289 -14128716 + GA-rich Low_complexity Low_complexity 2 74 -19 2124 134 0 0 chr20 52539289 52539596 -14128409 + AluSx SINE Alu 1 307 -5 199 198 0 42 chr20 52539596 52539616 -14128389 + GA-rich Low_complexity Low_complexity 74 93 0 425 308 14 7 chr20 52539750 52539896 -14128109 + L1ME LINE L1 5634 5780 -341 464 155 284 20 chr20 52539929 52540077 -14127928 + MER53 DNA DNA 1 187 -2 2024 121 0 0 chr20 52540397 52540678 -14127327 + AluSg SINE Alu 1 281 -29 222 37 0 0 chr20 52540682 52540709 -14127296 + (TAAAA)n Simple_repeat Simple_repeat 2 28 0 238 191 96 85 chr20 52540963 52541057 -14126948 + L2 LINE L2 3141 3235 -37 * 394 224 26 52 chr20 52541056 52541172 -14126833 + MIR SINE MIR 68 180 -82 2000 119 0 32 chr20 52542086 52542396 -14125609 + AluSx SINE Alu 1 300 -12 2013 124 0 3 chr20 52542406 52542705 -14125300 + AluSx SINE Alu 1 298 -14 313 286 23 86 chr20 52542854 52542869 -14125136 + L1MCa LINE L1 1881 1895 -4531 754 140 0 0 chr20 52542869 52542976 -14125029 + U6 snRNA snRNA 1 107 0 313 286 23 86 chr20 52542976 52543004 -14125001 + L1MCa LINE L1 1895 1923 -4503 1765 145 3 14 chr20 52543004 52543286 -14124719 - AluJo SINE Alu -33 279 1 313 286 23 86 chr20 52543286 52543360 -14124645 + L1MCa LINE L1 1923 1987 -4439 2250 97 0 0 chr20 52543360 52543658 -14124347 + AluSx SINE Alu 1 298 -14 313 286 23 86 chr20 52543658 52543713 -14124292 + L1MCa LINE L1 1987 2044 -4382 301 253 179 11 chr20 52543718 52543813 -14124192 - L2 LINE L2 0 3313 3203 959 191 61 93 chr20 52543813 52543957 -14124048 - MER58D DNA MER1_type -2054 366 219 1875 149 0 28 chr20 52543957 52544278 -14123727 - AluJb SINE Alu 0 312 1 959 191 61 93 chr20 52544278 52544302 -14123703 - MER58D DNA MER1_type -2201 219 196 790 153 0 0 chr20 52544302 52544420 -14123585 - FLAM_C SINE Alu -15 118 1 959 191 61 93 chr20 52544420 52544440 -14123565 - MER58D DNA MER1_type -2224 196 177 1567 179 19 0 chr20 52544440 52544731 -14123274 - AluJb SINE Alu 0 308 13 959 191 61 93 chr20 52544731 52544914 -14123091 - MER58D DNA MER1_type -2243 177 3 445 265 92 23 chr20 52544968 52545320 -14122685 - L2 LINE L2 -200 3113 2737 2123 106 0 16 chr20 52545345 52545648 -14122357 - AluSx SINE Alu -14 298 1 2266 97 7 0 chr20 52545662 52545962 -14122043 - AluSp SINE Alu -11 302 1 2448 54 0 0 chr20 52546043 52546339 -14121666 - AluY SINE Alu -15 296 1 822 113 8 0 chr20 52546391 52546515 -14121490 + FLAM_C SINE Alu 12 136 -7 2075 119 10 0 chr20 52546701 52547003 -14121002 - AluSx SINE Alu -7 305 1 193 132 132 0 chr20 52547190 52547228 -14120777 + L2 LINE L2 3225 3267 -5 646 149 0 50 chr20 52547236 52547357 -14120648 + FLAM_C SINE Alu 23 137 -6 2151 108 3 0 chr20 52547894 52548191 -14119814 + AluSp SINE Alu 1 298 -15 238 208 125 0 chr20 52548210 52548282 -14119723 + L1MC4a LINE L1 5413 5493 -628 1597 145 7 66 chr20 52548285 52548588 -14119417 + AluJb SINE Alu 11 295 -17 1069 130 0 45 chr20 52548596 52548773 -14119232 + FRAM SINE Alu 1 169 -7 257 262 68 10 chr20 52548797 52548900 -14119105 + L1MC4a LINE L1 5513 5621 -500 373 236 32 116 chr20 52548910 52549126 -14118879 + L1MC4a LINE L1 5675 5872 -1936 444 37 0 0 chr20 52549225 52549279 -14118726 + (TA)n Simple_repeat Simple_repeat 1 54 0 1403 172 72 0 chr20 52549284 52549426 -14118579 - AluJo SINE Alu -31 281 151 216 0 0 0 chr20 52549426 52549450 -14118555 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1403 172 72 0 chr20 52549450 52549569 -14118436 - AluJo SINE Alu -161 151 1 207 283 0 0 chr20 52549769 52549822 -14118183 + L2 LINE L2 3010 3062 -251 931 147 27 0 chr20 52550403 52550553 -14117452 + AluJo SINE Alu 1 154 -158 299 198 110 22 chr20 52550570 52550661 -14117344 - L2 LINE L2 -188 3125 3027 786 159 131 0 chr20 52550907 52551052 -14116953 + AluJo SINE Alu 136 299 -13 959 268 70 79 chr20 52551119 52551407 -14116598 - L1ME3A LINE L1 -224 5946 5664 463 235 37 86 chr20 52551407 52551594 -14116411 - MER5B DNA MER1_type 0 178 1 959 268 70 79 chr20 52551594 52551865 -14116140 - L1ME3A LINE L1 -506 5664 5392 367 289 115 28 chr20 52551944 52552197 -14115808 - L2 LINE L2 -357 2957 2683 288 301 31 31 chr20 52552647 52552810 -14115195 + L2 LINE L2 2683 2845 -469 410 302 35 85 chr20 52552884 52553142 -14114863 + L2 LINE L2 3027 3271 -1 320 333 87 26 chr20 52555482 52555677 -14112328 + MIR SINE MIR 44 250 -12 315 123 53 0 chr20 52555691 52555748 -14112257 + MIR SINE MIR 64 123 -139 188 237 0 0 chr20 52557360 52557398 -14110607 + L2 LINE L2 3257 3294 -19 715 168 0 8 chr20 52557409 52557528 -14110477 - FLAM_C SINE Alu -24 119 2 184 182 0 0 chr20 52558215 52558248 -14109757 + MIR SINE MIR 113 145 -63 375 259 56 0 chr20 52558362 52558470 -14109535 - MIR SINE MIR -85 177 64 250 324 28 21 chr20 52560827 52560969 -14107036 + MIR SINE MIR 23 165 -97 394 340 68 11 chr20 52561021 52561300 -14106705 - L2 LINE L2 -50 3263 2969 292 304 59 51 chr20 52561352 52561589 -14106416 - L2 LINE L2 -455 2859 2621 1545 136 72 8 chr20 52561594 52561878 -14106127 + AluSx SINE Alu 1 301 0 732 214 6 25 chr20 52562061 52562196 -14105809 + AluJo SINE Alu 3 136 -176 2340 87 3 3 chr20 52562196 52562508 -14105497 + AluSx SINE Alu 1 312 0 732 214 6 25 chr20 52562508 52562531 -14105474 + AluJo SINE Alu 136 158 -154 276 284 91 68 chr20 52562562 52562826 -14105179 + L1MC4a LINE L1 5797 6066 -1742 1032 216 57 94 chr20 52562860 52563018 -14104987 - L1MC4 LINE L1 -1 8041 7879 2138 112 0 0 chr20 52563018 52563314 -14104691 - AluSx SINE Alu -16 296 1 1032 216 57 94 chr20 52563314 52563580 -14104425 - L1MC4 LINE L1 -163 7879 7633 770 118 0 83 chr20 52563587 52563731 -14104274 - FLAM_C SINE Alu 0 143 12 2439 56 3 3 chr20 52563741 52564045 -14103960 - AluSp SINE Alu -1 312 9 1408 236 33 108 chr20 52564045 52564543 -14103462 - L1MC4 LINE L1 -261 7615 7095 2476 65 0 0 chr20 52564543 52564852 -14103153 - AluY SINE Alu -2 309 1 1408 236 33 108 chr20 52564852 52564923 -14103082 - L1MC4 LINE L1 -781 7095 7020 1706 179 27 0 chr20 52565241 52565542 -14102463 - AluJb SINE Alu -3 309 1 2315 80 0 7 chr20 52565723 52566024 -14101981 + AluSg SINE Alu 1 299 -11 2200 97 10 16 chr20 52566056 52566367 -14101638 - AluSx SINE Alu -2 310 2 223 211 353 55 chr20 52566433 52566711 -14101294 + L2 LINE L2 2815 3009 -304 2356 80 7 0 chr20 52566711 52567012 -14100993 - AluSp SINE Alu -10 303 1 223 211 353 55 chr20 52567012 52567116 -14100889 + L2 LINE L2 3009 3311 -2 2043 121 0 13 chr20 52567161 52567467 -14100538 - AluSx SINE Alu -9 303 2 2075 110 10 10 chr20 52567468 52567769 -14100236 - AluSx SINE Alu -11 301 1 814 248 141 35 chr20 52567839 52568010 -14099995 - MLT1B LTR MaLR 0 390 239 1914 102 81 0 chr20 52568010 52568293 -14099712 - AluSx SINE Alu -4 308 3 814 248 141 35 chr20 52568293 52568468 -14099537 - MLT1B LTR MaLR -151 239 7 387 212 0 0 chr20 52568576 52568642 -14099363 - FRAM SINE Alu -25 141 76 188 320 24 40 chr20 52568669 52568794 -14099211 - L2 LINE L2 -198 3074 2952 239 302 151 6 chr20 52568884 52569056 -14098949 - L2 LINE L2 -494 2820 2624 189 250 58 0 chr20 52569262 52569314 -14098691 - MIR SINE MIR -48 214 160 567 283 78 0 chr20 52569348 52569514 -14098491 + MIR SINE MIR 28 206 -56 2306 93 6 0 chr20 52569516 52569827 -14098178 + AluSp SINE Alu 1 313 0 1900 146 0 49 chr20 52570668 52570996 -14097009 - AluJb SINE Alu 0 312 1 1219 129 0 0 chr20 52571062 52571233 -14096772 - AluSg/x SINE Alu -13 299 129 2092 134 0 0 chr20 52571236 52571543 -14096462 - AluSg SINE Alu -3 307 1 1864 143 40 0 chr20 52571920 52572220 -14095785 - AluSx SINE Alu 0 312 1 751 167 0 0 chr20 52572416 52572530 -14095475 + FLAM_C SINE Alu 14 127 -16 183 284 23 57 chr20 52572908 52572996 -14095009 - MIR SINE MIR -118 144 60 1600 94 0 0 chr20 52572998 52573210 -14094795 - AluSp SINE Alu 0 313 102 2113 107 16 0 chr20 52573211 52573519 -14094486 + AluSp SINE Alu 1 313 0 886 71 0 0 chr20 52573519 52573631 -14094374 - AluSp SINE Alu -201 112 1 2061 117 0 29 chr20 52573641 52573948 -14094057 - AluSg SINE Alu -12 298 1 2306 172 28 95 chr20 52573959 52574557 -14093448 - L1MB7 LINE L1 -1 6183 5547 1972 131 0 0 chr20 52574557 52574866 -14093139 - AluSx SINE Alu 0 309 1 2306 172 28 95 chr20 52574866 52574877 -14093128 - L1MB7 LINE L1 -637 5547 5537 1935 154 0 3 chr20 52574877 52575183 -14092822 - AluJo SINE Alu -7 305 1 2306 172 28 95 chr20 52575183 52575221 -14092784 - L1MB7 LINE L1 -647 5537 5448 235 179 54 0 chr20 52575295 52575351 -14092654 - L1ME LINE L1 -504 5662 5604 2210 91 0 0 chr20 52575672 52575959 -14092046 + AluSg SINE Alu 1 287 -23 358 184 46 46 chr20 52576080 52576189 -14091816 - MIR SINE MIR -105 157 49 588 247 179 28 chr20 52576299 52576655 -14091350 - L2 LINE L2 -294 3019 2615 2220 102 3 0 chr20 52576854 52577157 -14090848 - AluSx SINE Alu -8 304 1 1878 135 62 0 chr20 52577160 52577448 -14090557 - AluSx SINE Alu -5 307 2 414 0 0 0 chr20 52577525 52577571 -14090434 + (TCTA)n Simple_repeat Simple_repeat 4 49 0 1656 156 41 24 chr20 52577571 52577866 -14090139 - AluJo SINE Alu -12 300 1 334 282 77 0 chr20 52578079 52578196 -14089809 - L1ME3A LINE L1 -48 6122 5997 1639 169 15 0 chr20 52578196 52578469 -14089536 - AluJo SINE Alu -2 310 34 1102 151 0 0 chr20 52578497 52578663 -14089342 - FRAM SINE Alu 0 166 1 262 294 49 74 chr20 52578873 52579086 -14088919 + MIR SINE MIR 35 257 -5 249 281 0 0 chr20 52579082 52579146 -14088859 + L2 LINE L2 2910 2973 -340 * 537 133 0 0 chr20 52579263 52579338 -14088667 + AluJ/FLAM SINE Alu 2 76 -236 2200 114 0 0 chr20 52579347 52579654 -14088351 + AluSx SINE Alu 1 307 -5 2330 80 0 0 chr20 52579655 52579955 -14088050 + AluSg SINE Alu 1 300 -10 917 158 27 33 chr20 52579955 52580127 -14087878 + AluSc SINE Alu 132 307 -2 521 318 58 12 chr20 52580144 52580223 -14087782 + L2 LINE L2 3040 3114 -199 183 42 0 0 chr20 52580223 52580247 -14087758 + (CCCCG)n Simple_repeat Simple_repeat 1 24 0 521 318 58 12 chr20 52580247 52580409 -14087596 + L2 LINE L2 3114 3292 -21 203 103 26 0 chr20 52580864 52580903 -14087102 + (CGG)n Simple_repeat Simple_repeat 1 40 0 244 188 62 0 chr20 52581420 52581468 -14086537 + MIR3 SINE MIR 108 158 -50 1949 154 0 0 chr20 52581595 52581893 -14086112 + AluJo SINE Alu 1 298 -14 2225 96 3 3 chr20 52581893 52582193 -14085812 + AluSx SINE Alu 1 301 -11 2086 122 7 0 chr20 52582193 52582489 -14085516 + AluSg SINE Alu 1 298 -12 282 56 0 0 chr20 52582498 52582534 -14085471 + (GGGAA)n Simple_repeat Simple_repeat 5 40 0 2078 125 0 6 chr20 52582689 52583002 -14085003 - AluSx SINE Alu -1 311 1 677 300 120 29 chr20 52583067 52583417 -14084588 + L2 LINE L2 2932 3313 0 333 200 248 8 chr20 52583870 52583995 -14084010 + MIR SINE MIR 1 155 -107 189 0 0 0 chr20 52584086 52584107 -14083898 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 207 0 0 0 chr20 52584106 52584129 -14083876 + (TA)n Simple_repeat Simple_repeat 1 23 0 2116 98 28 0 chr20 52584129 52584414 -14083591 - AluSg SINE Alu -17 293 1 1606 156 83 3 chr20 52584525 52584814 -14083191 - AluJb SINE Alu 0 312 1 708 253 73 13 chr20 52584814 52585047 -14082958 - Charlie4 DNA MER1_type -1689 272 26 276 294 19 6 chr20 52585465 52585625 -14082380 + (TG)n Simple_repeat Simple_repeat 2 163 0 257 208 0 0 chr20 52586280 52586333 -14081672 + C-rich Low_complexity Low_complexity 1 53 0 616 181 39 52 chr20 52586440 52586595 -14081410 + MIR SINE MIR 13 165 -97 311 260 48 0 chr20 52586745 52586849 -14081156 - MIR SINE MIR -141 121 13 205 292 22 11 chr20 52587077 52587166 -14080839 + MIR SINE MIR 34 123 -139 198 71 0 0 chr20 52587481 52587509 -14080496 + (TC)n Simple_repeat Simple_repeat 1 28 0 1137 162 0 0 chr20 52587509 52587688 -14080317 - AluJb SINE Alu -1 311 133 2074 135 0 0 chr20 52587688 52588000 -14080005 - AluSx SINE Alu 0 312 1 591 258 124 14 chr20 52588156 52588373 -14079632 + MLT1K LTR MaLR 233 473 -115 440 241 131 15 chr20 52588375 52588512 -14079493 - MIR SINE MIR -106 156 4 463 219 24 6 chr20 52588716 52588885 -14079120 + CT-rich Low_complexity Low_complexity 2 173 0 2153 116 0 3 chr20 52589074 52589375 -14078630 + AluSq SINE Alu 1 300 -13 193 289 82 21 chr20 52589432 52589529 -14078476 - L2 LINE L2 -3097 217 115 1550 132 0 5 chr20 52589540 52589760 -14078245 + AluSq SINE Alu 1 219 -94 811 118 0 8 chr20 52589760 52589871 -14078134 + AluSp/q SINE Alu 187 298 -15 573 183 10 0 chr20 52589871 52589975 -14078030 - MIR SINE MIR -139 123 19 218 209 194 0 chr20 52589998 52590065 -14077940 + L2 LINE L2 3221 3300 -13 198 103 0 0 chr20 52590065 52590094 -14077911 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 719 119 0 0 chr20 52590160 52590261 -14077744 - AluJ/FLAM SINE Alu -211 101 1 231 325 133 8 chr20 52590299 52590419 -14077586 + MIR SINE MIR 113 247 -15 215 242 121 0 chr20 52590558 52590624 -14077381 - MIR SINE MIR -19 243 170 260 180 40 0 chr20 52590639 52590689 -14077316 + L2 LINE L2 3221 3272 0 181 296 0 0 chr20 52591047 52591091 -14076914 + MIR SINE MIR 87 130 -78 189 265 20 0 chr20 52591234 52591283 -14076722 + MIR SINE MIR 82 131 -77 2253 113 3 0 chr20 52591419 52591728 -14076277 - AluSx SINE Alu -2 310 1 198 0 0 0 chr20 52592543 52592565 -14075440 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 1126 67 0 0 chr20 52592627 52592762 -14075243 + AluSq/x SINE Alu 1 135 -177 1944 132 3 49 chr20 52592762 52592897 -14075108 + AluSx SINE Alu 1 141 -171 2192 28 0 0 chr20 52592897 52593150 -14074855 + AluY SINE Alu 59 311 0 1944 132 3 49 chr20 52593150 52593362 -14074643 + AluSx SINE Alu 141 312 0 1633 169 0 58 chr20 52593371 52593679 -14074326 + AluJb SINE Alu 7 296 -16 418 143 0 0 chr20 52593706 52593783 -14074222 - MER53 DNA DNA -18 171 95 216 319 165 0 chr20 52593828 52593919 -14074086 - MIR SINE MIR -50 212 107 213 154 0 0 chr20 52594427 52594466 -14073539 + (TTCA)n Simple_repeat Simple_repeat 4 42 0 650 290 100 28 chr20 52594481 52594771 -14073234 - L2 LINE L2 -9 3304 2994 2188 112 3 0 chr20 52594773 52595069 -14072936 + AluSg SINE Alu 1 297 -13 323 278 78 0 chr20 52595167 52595282 -14072723 + L2 LINE L2 2977 3100 -213 889 223 80 0 chr20 52595617 52595841 -14072164 - L1MB5 LINE L1 -38 6136 5895 926 136 36 77 chr20 52595880 52595990 -14072015 - L1MB5 LINE L1 -382 5792 5694 2002 106 0 59 chr20 52595990 52596310 -14071695 - AluSx SINE Alu -11 301 1 926 136 36 77 chr20 52596310 52596420 -14071585 - L1MB5 LINE L1 -480 5694 5581 741 160 8 25 chr20 52596443 52596562 -14071443 - FLAM_C SINE Alu -15 118 2 392 335 57 0 chr20 52596566 52596724 -14071281 - MIR SINE MIR -36 226 60 459 263 39 19 chr20 52596891 52597039 -14070966 + MIR SINE MIR 40 193 -69 2206 111 3 3 chr20 52597039 52597345 -14070660 + AluSx SINE Alu 1 306 -6 579 268 12 24 chr20 52597914 52598082 -14069923 - MIR SINE MIR -83 179 14 238 226 0 0 chr20 52598516 52598569 -14069436 + MIR SINE MIR 96 148 -114 468 268 128 17 chr20 52599013 52599035 -14068970 + L2 LINE L2 2847 2865 -448 447 19 0 0 chr20 52599035 52599087 -14068918 + (CA)n Simple_repeat Simple_repeat 2 53 0 468 268 128 17 chr20 52599087 52599243 -14068762 + L2 LINE L2 2865 3045 -268 1653 140 0 8 chr20 52599244 52599501 -14068504 - AluJb SINE Alu -51 261 7 2252 65 0 49 chr20 52599517 52599824 -14068181 - AluY SINE Alu -18 293 2 843 288 100 22 chr20 52599888 52600445 -14067560 - L2 LINE L2 0 3313 2715 314 264 14 0 chr20 52601327 52601399 -14066606 - L2 LINE L2 -1 3312 3240 455 75 0 60 chr20 52601399 52601497 -14066508 - AluSg/x SINE Alu 0 312 219 2392 88 0 0 chr20 52601706 52602011 -14065994 - AluSx SINE Alu -7 305 1 673 192 72 42 chr20 52602012 52602205 -14065800 - L2 LINE L2 -280 3033 2835 207 279 23 12 chr20 52602318 52602404 -14065601 + (TG)n Simple_repeat Simple_repeat 1 87 0 206 263 47 18 chr20 52602471 52602642 -14065363 + (TG)n Simple_repeat Simple_repeat 1 176 0 2027 117 0 23 chr20 52603447 52603747 -14064258 + AluSx SINE Alu 1 293 -19 310 252 38 69 chr20 52604010 52604045 -14063960 - MIR SINE MIR -49 159 124 1985 149 0 16 chr20 52604045 52604353 -14063652 + AluJo SINE Alu 1 303 -9 310 252 38 69 chr20 52604353 52604448 -14063557 - MIR SINE MIR -84 124 33 1743 158 17 10 chr20 52604861 52605152 -14062853 - AluJo SINE Alu -19 293 1 867 137 0 0 chr20 52605179 52605310 -14062695 - FLAM_C SINE Alu 0 133 3 188 232 36 0 chr20 52605451 52605507 -14062498 + MIR SINE MIR 75 132 -130 2410 73 0 0 chr20 52606060 52606361 -14061644 + AluY SINE Alu 1 301 -10 388 261 33 0 chr20 52606493 52606585 -14061420 + L2 LINE L2 3206 3300 -13 1521 156 46 36 chr20 52606586 52606888 -14061117 + AluJo SINE Alu 1 305 -7 1595 113 0 0 chr20 52606896 52607109 -14060896 + AluSq SINE Alu 1 213 -100 858 131 35 7 chr20 52607204 52607349 -14060656 - MIR SINE MIR -86 176 28 392 308 98 0 chr20 52607354 52607497 -14060508 + L2 LINE L2 3153 3309 -4 378 278 28 0 chr20 52607507 52607615 -14060390 + MIR SINE MIR 81 191 -71 430 263 43 69 chr20 52607626 52607815 -14060190 + MIR SINE MIR 8 186 -22 201 338 88 0 chr20 52608157 52608237 -14059768 - MIR SINE MIR -92 170 84 803 258 100 46 chr20 52608475 52608886 -14059119 + L2 LINE L2 2841 3273 -40 882 153 0 0 chr20 52609073 52609204 -14058801 - FLAM_C SINE Alu 0 133 3 195 333 40 13 chr20 52609223 52609298 -14058707 + MIR SINE MIR 112 188 -74 180 243 0 0 chr20 52609809 52609883 -14058122 + (GGGTG)n Simple_repeat Simple_repeat 3 76 0 308 270 71 56 chr20 52609912 52610038 -14057967 + MIR SINE MIR 22 149 -113 1839 148 7 3 chr20 52610189 52610486 -14057519 + AluJo SINE Alu 1 298 -14 421 256 186 53 chr20 52610493 52610794 -14057211 - L2 LINE L2 -21 3292 2952 419 247 68 62 chr20 52611333 52611479 -14056526 + MIR SINE MIR 20 166 -96 409 278 162 4 chr20 52611832 52612073 -14055932 + L2 LINE L2 2530 2808 -506 400 328 40 35 chr20 52612189 52612390 -14055615 + L2 LINE L2 3111 3312 -1 300 238 218 0 chr20 52612394 52612495 -14055510 - MIR SINE MIR -79 183 61 192 40 0 0 chr20 52612500 52612525 -14055480 + (ATG)n Simple_repeat Simple_repeat 2 26 0 325 272 37 0 chr20 52612530 52612611 -14055394 - L2 LINE L2 -11 3302 3219 1493 142 4 73 chr20 52612613 52612748 -14055257 + AluSx SINE Alu 1 113 -199 1940 102 29 4 chr20 52612748 52613048 -14054957 + AluSp SINE Alu 1 307 0 1493 142 4 73 chr20 52613048 52613171 -14054834 + AluSx SINE Alu 113 243 -69 512 271 8 0 chr20 52613196 52613325 -14054680 - MIR SINE MIR -34 228 99 205 220 60 0 chr20 52613700 52613750 -14054255 + MIR SINE MIR 70 122 -86 2451 73 0 0 chr20 52614208 52614510 -14053495 - AluY SINE Alu -9 302 1 320 256 12 0 chr20 52614699 52614781 -14053224 - MIR SINE MIR -117 145 63 301 215 15 0 chr20 52615250 52615315 -14052690 + MIR SINE MIR 87 152 -56 479 273 93 34 chr20 52615522 52615727 -14052278 + MIR SINE MIR 20 236 -26 237 315 19 25 chr20 52615940 52616102 -14051903 + L2 LINE L2 2819 2979 -293 2283 104 0 0 chr20 52616120 52616429 -14051576 - AluSg SINE Alu -1 309 1 372 313 75 0 chr20 52616513 52616647 -14051358 - L1MDa LINE L1 -3917 2623 2480 207 139 0 0 chr20 52616650 52616686 -14051319 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 518 309 74 25 chr20 52616909 52617152 -14050853 + MIR SINE MIR 8 262 0 893 169 0 0 chr20 52617399 52617541 -14050464 + FLAM_C SINE Alu 1 142 -1 180 302 63 0 chr20 52617546 52617609 -14050396 - MIR SINE MIR -79 183 117 280 258 142 33 chr20 52617618 52617738 -14050267 - L2 LINE L2 -2 3270 3138 234 348 68 28 chr20 52617943 52618193 -14049812 + L2 LINE L2 2932 3191 -81 2071 114 0 35 chr20 52618348 52618663 -14049342 - AluSq SINE Alu -9 304 1 867 145 0 0 chr20 52618688 52618812 -14049193 - FLAM_C SINE Alu -19 124 1 583 273 22 0 chr20 52618823 52618962 -14049043 + L2 LINE L2 3171 3312 -1 316 289 26 0 chr20 52618963 52619039 -14048966 + polypurine Low_complexity Low_complexity 2 79 0 332 305 119 0 chr20 52619065 52619183 -14048822 - L2 LINE L2 0 3313 3182 594 271 77 0 chr20 52619799 52619980 -14048025 + MIR SINE MIR 59 253 -9 1732 167 64 0 chr20 52620036 52620318 -14047687 - AluJo SINE Alu -12 300 1 215 285 181 49 chr20 52620415 52620559 -14047446 + L2 LINE L2 3109 3271 -1 521 247 7 55 chr20 52620821 52620840 -14047165 - L2 LINE L2 -7 3306 3288 1844 133 3 36 chr20 52620840 52621141 -14046864 + AluSx SINE Alu 9 299 -13 521 247 7 55 chr20 52621141 52621267 -14046738 - L2 LINE L2 -25 3288 3168 401 278 40 0 chr20 52621830 52621956 -14046049 + MIR SINE MIR 27 157 -105 1961 123 3 35 chr20 52621966 52622276 -14045729 + AluSx SINE Alu 1 300 -12 2222 78 3 0 chr20 52622283 52622600 -14045405 + AluSg SINE Alu 1 318 0 411 57 0 0 chr20 52622662 52622715 -14045290 - MER1B DNA MER1_type 0 333 281 1123 170 0 0 chr20 52622757 52622945 -14045060 - MER1B DNA MER1_type -107 190 3 210 278 0 0 chr20 52622995 52623049 -14044956 + (TTA)n Simple_repeat Simple_repeat 1 54 0 1929 138 0 28 chr20 52623049 52623369 -14044636 + AluJo SINE Alu 1 311 -1 369 43 0 0 chr20 52623373 52623420 -14044585 + (TAG)n Simple_repeat Simple_repeat 1 47 0 425 266 128 5 chr20 52624384 52624544 -14043461 + MIR SINE MIR 13 191 -34 825 264 79 4 chr20 52625363 52625590 -14042415 - MIR SINE MIR -16 246 3 1846 154 13 7 chr20 52626421 52626726 -14041279 - AluJb SINE Alu -5 307 1 393 359 75 31 chr20 52626899 52626973 -14041032 - L1MC4a LINE L1 -1836 5972 5903 2067 119 27 0 chr20 52626973 52627266 -14040739 + AluSx SINE Alu 3 303 -9 393 359 75 31 chr20 52627266 52627615 -14040390 - L1MC4a LINE L1 -1905 5903 5530 312 163 0 38 chr20 52627722 52627802 -14040203 - L1ME4a LINE L1 -1 6120 6044 453 287 52 50 chr20 52627835 52628076 -14039929 + MIR SINE MIR 8 261 -1 231 271 51 0 chr20 52628647 52628706 -14039299 - L2 LINE L2 0 3313 3252 2248 108 0 13 chr20 52628776 52629092 -14038913 - AluSx SINE Alu 0 312 1 180 0 0 0 chr20 52629115 52629135 -14038870 + (T)n Simple_repeat Simple_repeat 1 20 0 1756 160 17 7 chr20 52629187 52629481 -14038524 + AluJo SINE Alu 1 297 -15 230 323 8 39 chr20 52629539 52629666 -14038339 - L2 LINE L2 -174 3098 2976 296 262 103 47 chr20 52629846 52629953 -14038052 + L2 LINE L2 3142 3254 -18 915 232 52 79 chr20 52629956 52630125 -14037880 + MLT1C LTR MaLR 15 187 -280 2268 119 0 0 chr20 52630125 52630437 -14037568 + AluSx SINE Alu 1 312 0 915 232 52 79 chr20 52630437 52630672 -14037333 + MLT1C LTR MaLR 187 408 -59 1888 57 109 11 chr20 52630677 52630960 -14037045 - AluY SINE Alu 0 311 1 1492 113 0 9 chr20 52630960 52631181 -14036824 - AluJb SINE Alu -7 305 87 252 130 0 0 chr20 52631249 52631295 -14036710 + (TGAA)n Simple_repeat Simple_repeat 1 46 0 705 141 0 0 chr20 52631395 52631494 -14036511 - AluJo SINE Alu -130 182 84 275 321 107 8 chr20 52631983 52632114 -14035891 + MIR SINE MIR 98 241 -21 625 241 62 0 chr20 52632625 52632787 -14035218 + MIR SINE MIR 13 184 -78 920 133 0 0 chr20 52632864 52632992 -14035013 - FLAM_C SINE Alu -3 130 3 315 346 103 5 chr20 52633064 52633249 -14034756 - MIR SINE MIR -55 207 5 1058 133 0 48 chr20 52633325 52633491 -14034514 - FRAM SINE Alu -4 162 5 469 200 153 26 chr20 52633500 52633690 -14034315 - MER20 DNA MER1_type 0 219 6 23 0 0 0 chr20 52633820 52633843 -14034162 + AT_rich Low_complexity Low_complexity 1 23 0 2092 113 20 0 chr20 52633858 52634151 -14033854 + AluSx SINE Alu 3 301 -11 213 118 0 0 chr20 52634404 52634438 -14033567 - MIR SINE MIR -119 143 110 1839 139 7 0 chr20 52634641 52634915 -14033090 + AluJb SINE Alu 1 276 -36 2188 92 0 0 chr20 52634918 52635201 -14032804 - AluSx SINE Alu -18 294 12 1005 75 0 0 chr20 52635201 52635335 -14032670 + AluY SINE Alu 173 306 -5 328 281 42 0 chr20 52635636 52635732 -14032273 - MIR SINE MIR -150 112 13 249 128 0 0 chr20 52635774 52635821 -14032184 + (CA)n Simple_repeat Simple_repeat 2 48 0 182 355 13 0 chr20 52635953 52636029 -14031976 + MIR SINE MIR 54 130 -78 301 305 104 7 chr20 52636534 52636663 -14031342 + MIR SINE MIR 94 242 -20 2394 92 0 0 chr20 52636663 52636968 -14031037 - AluSx SINE Alu -7 305 1 301 305 104 7 chr20 52636968 52636992 -14031013 + MIR SINE MIR 242 262 0 428 277 115 0 chr20 52637050 52637212 -14030793 + MIR SINE MIR 33 212 -50 381 258 70 8 chr20 52637295 52637423 -14030582 + MIR3 SINE MIR 2 137 -71 244 214 129 0 chr20 52637550 52637620 -14030385 + MER91A DNA MER1_type 93 171 -25 759 124 0 0 chr20 52638008 52638113 -14029892 - FLAM_C SINE Alu -38 105 1 1542 236 45 73 chr20 52638114 52638872 -14029133 + L2 LINE L2 2546 3306 -7 219 232 0 0 chr20 52639612 52639668 -14028337 + (TCCA)n Simple_repeat Simple_repeat 3 58 0 2364 90 0 0 chr20 52639707 52639997 -14028008 - AluSx SINE Alu -24 288 1 650 275 210 15 chr20 52640031 52640365 -14027640 + L2 LINE L2 2915 3313 0 2270 112 3 0 chr20 52640627 52640931 -14027074 + AluSx SINE Alu 1 305 -7 892 152 0 0 chr20 52640931 52641063 -14026942 + FLAM_C SINE Alu 1 132 -1 288 238 59 10 chr20 52641066 52641167 -14026838 + Charlie8 DNA MER1_type 74 179 -2238 214 213 187 27 chr20 52641264 52641339 -14026666 + MIR3 SINE MIR 68 154 -54 955 117 0 0 chr20 52641339 52641467 -14026538 + AluJo/FLAM SINE Alu 1 128 -174 1286 68 6 0 chr20 52641467 52641629 -14026376 - AluY SINE Alu -18 293 131 23 0 0 0 chr20 52641629 52641652 -14026353 + AT_rich Low_complexity Low_complexity 1 23 0 1562 141 21 95 chr20 52641655 52641982 -14026023 + AluJo SINE Alu 10 312 0 244 279 194 24 chr20 52642360 52642525 -14025480 - MIR SINE MIR 0 262 70 551 258 7 73 chr20 52642628 52642779 -14025226 - L2 LINE L2 0 3313 3173 228 149 0 0 chr20 52642942 52642989 -14025016 + (TA)n Simple_repeat Simple_repeat 2 48 0 2142 131 0 0 chr20 52642990 52643281 -14024724 - AluJb SINE Alu -16 296 6 2346 98 0 3 chr20 52643298 52643604 -14024401 - AluSx SINE Alu -4 308 4 1587 96 0 0 chr20 52643638 52643835 -14024170 + AluSg/x SINE Alu 98 294 -18 2144 127 7 0 chr20 52644562 52644869 -14023136 - AluSx SINE Alu -3 309 1 2234 122 0 3 chr20 52644878 52645215 -14022790 - AluSq SINE Alu 0 313 1 2208 106 7 0 chr20 52645228 52645512 -14022493 - AluSx SINE Alu -26 286 1 1992 104 7 4 chr20 52645632 52645902 -14022103 + AluSx SINE Alu 40 310 -2 2279 128 0 0 chr20 52645904 52646282 -14021723 + AluSx SINE Alu 1 378 0 2286 115 0 0 chr20 52646719 52647015 -14020990 - AluSx SINE Alu -16 296 1 1985 159 7 0 chr20 52647017 52647326 -14020679 - AluSx SINE Alu -1 311 1 312 235 39 20 chr20 52647333 52647435 -14020570 + Charlie8 DNA MER1_type 79 182 -2235 2462 90 3 0 chr20 52647772 52648073 -14019932 - AluSp SINE Alu -11 302 1 2359 83 3 0 chr20 52648262 52648552 -14019453 + AluSp SINE Alu 1 291 -22 2040 117 52 3 chr20 52648997 52649287 -14018718 + AluSx SINE Alu 1 304 -8 2557 63 0 0 chr20 52649683 52649986 -14018019 - AluY SINE Alu -8 303 1 1810 152 10 17 chr20 52649987 52650139 -14017866 - AluJb SINE Alu -18 294 143 2104 66 100 0 chr20 52650139 52650410 -14017595 - AluY SINE Alu -13 298 1 1810 152 10 17 chr20 52650410 52650553 -14017452 - AluJb SINE Alu -169 143 1 2139 103 11 7 chr20 52651120 52651421 -14016584 + AluSq SINE Alu 1 302 0 1557 170 88 28 chr20 52651438 52651802 -14016203 + MER58D DNA MER1_type 1 386 0 22 0 0 0 chr20 52651905 52651927 -14016078 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr20 52652104 52652126 -14015879 + AT_rich Low_complexity Low_complexity 1 22 0 970 280 45 6 chr20 52654187 52654498 -14013507 - MER113 DNA MER1_type? -48 473 151 308 235 243 7 chr20 52654575 52654711 -14013294 + MIR SINE MIR 83 250 -12 2392 77 24 0 chr20 52655655 52655953 -14012052 - AluSp SINE Alu -8 305 1 197 277 133 0 chr20 52656083 52656166 -14011839 + L2 LINE L2 2944 3037 -235 349 311 162 28 chr20 52656492 52656987 -14011018 + L2 LINE L2 2317 2877 -437 2458 85 0 0 chr20 52657559 52657866 -14010139 + AluY SINE Alu 1 307 -4 1944 158 7 0 chr20 52657877 52658174 -14009831 + AluSx SINE Alu 1 299 -13 238 316 209 8 chr20 52658355 52658589 -14009416 + L1MC4a LINE L1 5512 5792 -2016 2023 151 56 19 chr20 52658844 52659256 -14008749 + L1MC3 LINE L1 7358 7784 -1 2056 141 7 7 chr20 52659267 52659565 -14008440 + AluJo SINE Alu 1 298 -14 257 240 192 0 chr20 52659788 52659934 -14008071 - LTR33A LTR ERVL -5 518 383 899 265 192 11 chr20 52660006 52660376 -14007629 - LTR50 LTR ERVL -330 465 29 225 312 80 0 chr20 52660818 52660956 -14007049 + LTR33A LTR ERVL 324 472 -51 913 102 131 11 chr20 52660965 52661141 -14006864 + L1MA9 LINE L1 5639 5835 -477 802 80 0 0 chr20 52661144 52661244 -14006761 + AluSg/x SINE Alu 188 287 -23 2714 152 50 0 chr20 52661244 52661719 -14006286 + L1MA9 LINE L1 5814 6312 0 185 226 19 57 chr20 52661746 52661799 -14006206 - L3 LINE CR1 -520 1057 1007 2141 122 3 3 chr20 52661819 52662107 -14005898 - AluSx SINE Alu -22 290 3 2010 99 75 7 chr20 52662174 52662456 -14005549 - AluSq SINE Alu -12 301 1 331 265 68 26 chr20 52662466 52662583 -14005422 + L1MC4a LINE L1 5811 5932 -1876 2150 134 0 3 chr20 52662802 52663101 -14004904 + AluSx SINE Alu 1 298 -14 652 218 49 76 chr20 52663130 52663355 -14004650 + MER20 DNA MER1_type 1 219 0 548 268 171 17 chr20 52663766 52664053 -14003952 - L1MC4a LINE L1 -1892 5916 5586 1203 136 10 7 chr20 52664253 52664473 -14003532 + L1M4 LINE L1 5458 5674 -509 2527 72 3 0 chr20 52664473 52664779 -14003226 + AluSg1 SINE Alu 1 307 -2 206 61 82 0 chr20 52664798 52664847 -14003158 + (TA)n Simple_repeat Simple_repeat 1 53 0 39 0 0 0 chr20 52664863 52664902 -14003103 + AT_rich Low_complexity Low_complexity 1 39 0 302 239 37 55 chr20 52664902 52665011 -14002994 - L1MCa LINE L1 -4328 2098 1992 36 40 0 0 chr20 52665025 52665075 -14002930 + AT_rich Low_complexity Low_complexity 1 50 0 2380 171 70 23 chr20 52665104 52665650 -14002355 + L1MB7 LINE L1 5597 6175 -9 278 143 20 0 chr20 52665815 52665864 -14002141 - L1MB5 LINE L1 -43 6131 6082 615 201 152 12 chr20 52666627 52666791 -14001214 + MIR SINE MIR 1 187 -75 1208 265 204 13 chr20 52668659 52669406 -13998599 - L2 LINE L2 0 3313 2417 420 191 82 14 chr20 52669466 52669613 -13998392 - MER113 DNA MER1_type? -305 216 60 459 132 0 0 chr20 52669973 52670041 -13997964 + MLT1B LTR MaLR 6 73 -317 * 706 145 53 23 chr20 52670027 52670158 -13997847 + MLT1B LTR MaLR 256 390 0 323 282 129 0 chr20 52670197 52670321 -13997684 + L1ME4a LINE L1 5978 6117 -4 327 312 9 9 chr20 52670349 52670458 -13997547 + L2 LINE L2 2911 3019 -294 1867 169 16 3 chr20 52670583 52670891 -13997114 + AluJb SINE Alu 1 312 0 1234 136 0 17 chr20 52670892 52671069 -13996936 + AluJb SINE Alu 131 304 -8 2279 108 3 0 chr20 52671073 52671361 -13996644 + AluSg SINE Alu 5 293 -17 362 186 14 0 chr20 52672110 52672180 -13995825 - Charlie1 DNA MER1_type 0 2761 2691 857 122 0 0 chr20 52672180 52672295 -13995710 - AluSp/q SINE Alu -11 302 188 225 0 0 0 chr20 52672335 52672360 -13995645 + (A)n Simple_repeat Simple_repeat 1 25 0 1250 79 7 0 chr20 52673303 52673455 -13994550 - AluSp SINE Alu -160 153 1 729 298 175 31 chr20 52673458 52673994 -13994011 + L2 LINE L2 2693 3313 0 1984 145 0 0 chr20 52674187 52674469 -13993536 - AluSx SINE Alu -30 282 1 270 301 65 46 chr20 52674602 52674755 -13993250 + L2 LINE L2 3158 3313 0 2503 77 0 0 chr20 52674765 52675062 -13992943 + AluSc SINE Alu 1 297 -12 2486 53 7 3 chr20 52675139 52675441 -13992564 + AluY SINE Alu 1 303 -8 2264 113 0 0 chr20 52675498 52675790 -13992215 - AluSx SINE Alu -20 292 1 1798 123 90 0 chr20 52676430 52676736 -13991269 + AluSg SINE Alu 1 330 0 2291 86 6 26 chr20 52677312 52677660 -13990345 + AluSp SINE Alu 1 313 0 635 190 166 6 chr20 52677936 52678099 -13989906 + MER5A DNA MER1_type 1 189 0 523 288 186 27 chr20 52678480 52679103 -13988902 - L2 LINE L2 -7 3306 2474 369 246 280 6 chr20 52679244 52679419 -13988586 + MIR SINE MIR 16 238 -24 228 329 82 41 chr20 52679547 52679693 -13988312 + L3 LINE CR1 1413 1564 -13 2426 87 3 0 chr20 52680232 52680532 -13987473 + AluSg SINE Alu 1 301 -9 622 271 206 39 chr20 52681345 52681908 -13986097 + L2 LINE L2 2641 3308 -5 26 0 0 0 chr20 52683840 52683866 -13984139 + GC_rich Low_complexity Low_complexity 1 26 0 242 250 45 68 chr20 52684293 52684381 -13983624 - MIR SINE MIR -130 132 47 384 22 0 0 chr20 52684530 52684575 -13983430 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 597 180 218 47 chr20 52684579 52684855 -13983150 - L2 LINE L2 -12 3301 2931 378 231 66 0 chr20 52684924 52685015 -13982990 - MIR SINE MIR -61 147 51 198 295 283 8 chr20 52685044 52685288 -13982717 + L2 LINE L2 2479 2789 -525 327 258 57 0 chr20 52685292 52685416 -13982589 + MER94 DNA DNA 3 133 -1 361 195 94 102 chr20 52685462 52685547 -13982458 - MER96 DNA MER1_type? -44 131 46 2378 94 0 0 chr20 52685547 52685845 -13982160 + AluSx SINE Alu 1 298 -14 361 195 94 102 chr20 52685845 52685887 -13982118 - MER96 DNA MER1_type? -129 46 5 211 256 47 23 chr20 52685915 52686001 -13982004 + L2 LINE L2 2869 2956 -357 496 288 59 13 chr20 52686248 52686401 -13981604 + MIR SINE MIR 31 190 -72 351 182 47 60 chr20 52686461 52686570 -13981435 - MIR SINE MIR -48 214 104 313 286 88 27 chr20 52686884 52687031 -13980974 + MIR SINE MIR 107 262 0 * 528 281 23 47 chr20 52687001 52687172 -13980833 - MIR SINE MIR -48 214 48 2160 106 7 13 chr20 52687454 52687756 -13980249 + AluSx SINE Alu 1 300 -12 277 319 66 24 chr20 52687801 52687967 -13980038 + MLT1L LTR MaLR 443 615 0 1973 112 48 0 chr20 52688324 52688627 -13979378 + AluSx SINE Alu 1 316 0 1158 183 35 4 chr20 52689025 52689256 -13978749 - MIR SINE MIR -4 258 19 356 164 39 39 chr20 52689348 52689374 -13978631 + HsTC2 DNA Tc2 3 28 -1870 2291 77 43 20 chr20 52689374 52689674 -13978331 - AluSg SINE Alu -3 307 1 356 164 39 39 chr20 52689674 52689749 -13978256 + HsTC2 DNA Tc2 27 1895 -3 491 233 180 17 chr20 52689749 52689921 -13978084 + L1MC4a LINE L1 5408 5607 -2201 1762 149 10 27 chr20 52689923 52690219 -13977786 + AluJo SINE Alu 12 302 -10 458 206 59 29 chr20 52690243 52690379 -13977626 + L1MC4a LINE L1 5793 5932 -1876 989 225 119 0 chr20 52690513 52690740 -13977265 - MER58B DNA MER1_type -1 340 87 1960 146 4 0 chr20 52690752 52691032 -13976973 + AluJo SINE Alu 6 286 -26 271 0 0 0 chr20 52691032 52691062 -13976943 + (CAAA)n Simple_repeat Simple_repeat 2 120 0 204 143 0 0 chr20 52691231 52691273 -13976732 + (TA)n Simple_repeat Simple_repeat 2 43 0 1806 163 0 13 chr20 52691316 52691616 -13976389 + AluJb SINE Alu 1 296 -16 710 245 73 17 chr20 52692095 52692328 -13975677 + MIR SINE MIR 17 262 0 330 269 32 0 chr20 52692451 52692544 -13975461 + MIR SINE MIR 28 123 -139 834 251 86 13 chr20 52692696 52693063 -13974942 + MLT1K LTR MaLR 112 561 -27 1374 101 0 0 chr20 52693184 52693363 -13974642 + AluSq SINE Alu 1 179 -134 208 305 158 0 chr20 52693473 52693555 -13974450 + L2 LINE L2 3218 3312 -1 1275 182 66 36 chr20 52693583 52693885 -13974120 + AluJo SINE Alu 1 311 -1 1032 286 118 21 chr20 52693911 52694026 -13973979 + L2 LINE L2 2793 2895 -418 2022 116 7 3 chr20 52694026 52694329 -13973676 - AluSq SINE Alu -9 304 1 1032 286 118 21 chr20 52694329 52694681 -13973324 + L2 LINE L2 2895 3308 -5 211 103 0 0 chr20 52696184 52696213 -13971792 - MIR SINE MIR -18 244 216 262 170 0 0 chr20 52696226 52696273 -13971732 + L2 LINE L2 3014 3060 -212 512 30 15 0 chr20 52696308 52696374 -13971631 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 2148 82 4 0 chr20 52696374 52696654 -13971351 - AluSc SINE Alu -28 281 1 716 163 24 24 chr20 52696664 52696787 -13971218 - FLAM_C SINE Alu -19 124 2 407 268 115 32 chr20 52696941 52697131 -13970874 - MIR SINE MIR -21 241 40 219 338 149 36 chr20 52697263 52697485 -13970520 - MIR SINE MIR 0 262 16 1041 261 97 54 chr20 52697715 52698104 -13969901 + L2 LINE L2 2812 3226 -87 2202 85 20 13 chr20 52698104 52698409 -13969596 - AluSx SINE Alu -5 307 1 1041 261 97 54 chr20 52698409 52698483 -13969522 + L2 LINE L2 3226 3295 -18 459 187 28 56 chr20 52698498 52698605 -13969400 + L2 LINE L2 3191 3294 -19 288 338 56 14 chr20 52699177 52699319 -13968686 + MIR SINE MIR 3 150 -112 868 246 40 5 chr20 52699330 52699554 -13968451 - LTR16A1 LTR ERVL -12 445 214 351 212 61 0 chr20 52699625 52699724 -13968281 - LTR16A1 LTR ERVL -352 105 1 272 200 0 33 chr20 52699805 52699865 -13968140 - MIR SINE MIR -55 153 96 783 235 26 77 chr20 52699957 52700229 -13967776 - MER102b DNA MER1_type -30 311 54 1163 253 95 46 chr20 52700806 52701309 -13966696 + MLT1K LTR MaLR 61 588 0 239 318 24 12 chr20 52701492 52701577 -13966428 - MIR SINE MIR -97 165 80 201 243 0 0 chr20 52701763 52701800 -13966205 + (CTCA)n Simple_repeat Simple_repeat 3 39 0 2248 100 0 3 chr20 52702102 52702402 -13965603 + AluSx SINE Alu 1 299 -13 462 196 52 0 chr20 52702586 52702683 -13965322 + MIR SINE MIR 49 150 -112 2162 110 3 0 chr20 52702685 52702986 -13965019 + AluSx SINE Alu 1 302 -10 349 294 73 0 chr20 52702989 52703125 -13964880 - MIR SINE MIR 0 262 117 730 247 183 18 chr20 52703140 52703529 -13964476 + L2 LINE L2 2842 3294 -19 197 156 0 67 chr20 52703512 52703557 -13964448 + MIR SINE MIR 202 243 -19 * 190 234 0 43 chr20 52703526 52703573 -13964432 + L2 LINE L2 3217 3261 -11 * 228 391 33 20 chr20 52704553 52704704 -13963301 - MIR SINE MIR -90 172 20 226 227 151 59 chr20 52704858 52704977 -13963028 + MIR3 SINE MIR 59 188 -20 1913 106 0 4 chr20 52705055 52705320 -13962685 + AluSq SINE Alu 29 292 -21 311 300 45 0 chr20 52705498 52705608 -13962397 - L1ME3 LINE L1 -2 6160 6046 522 202 207 81 chr20 52705630 52705664 -13962341 - MER58A DNA MER1_type -2197 223 195 2061 114 0 7 chr20 52705664 52705961 -13962044 + AluSx SINE Alu 1 295 -17 522 202 207 81 chr20 52705961 52706124 -13961881 - MER58A DNA MER1_type -2225 195 1 2394 85 3 0 chr20 52706140 52706446 -13961559 + AluSp SINE Alu 1 307 -6 1047 288 28 18 chr20 52706447 52706843 -13961162 - L1ME2 LINE L1 -120 6044 5645 278 210 25 12 chr20 52706865 52706946 -13961059 - MIR SINE MIR 0 262 181 2926 168 53 69 chr20 52707123 52707205 -13960800 + L1MC3 LINE L1 7120 7202 -583 2116 122 3 0 chr20 52707205 52707509 -13960496 + AluSx SINE Alu 1 305 -7 1677 168 21 0 chr20 52707518 52707803 -13960202 + AluJb SINE Alu 1 291 -21 2926 168 53 69 chr20 52707803 52707828 -13960177 + L1MC3 LINE L1 7210 7234 -551 1249 167 130 40 chr20 52707828 52708104 -13959901 - AluJb SINE Alu -1 301 1 2926 168 53 69 chr20 52708104 52708354 -13959651 + L1MC3 LINE L1 7234 7487 -298 2240 90 7 0 chr20 52708354 52708654 -13959351 + AluSc SINE Alu 1 302 -7 2926 168 53 69 chr20 52708654 52708961 -13959044 + L1MC3 LINE L1 7487 7785 0 203 211 42 42 chr20 52709935 52710006 -13957999 + L2 LINE L2 2932 3002 -311 434 279 59 63 chr20 52710090 52710377 -13957628 + L2 LINE L2 1861 2146 -1168 1384 128 0 5 chr20 52710435 52710646 -13957359 - AluSg/x SINE Alu -4 306 97 330 93 0 0 chr20 52710646 52710689 -13957316 - Alu SINE Alu -258 43 1 1157 289 106 2 chr20 52710690 52711428 -13956577 + L2 LINE L2 2229 3060 -253 253 258 264 28 chr20 52711956 52712138 -13955867 + MIR SINE MIR 36 260 -2 564 235 92 20 chr20 52712212 52712408 -13955597 - MIR SINE MIR -38 224 15 314 216 99 36 chr20 52712809 52712920 -13955085 + MIR SINE MIR 27 144 -64 1207 286 107 32 chr20 52712996 52713215 -13954790 - L2 LINE L2 0 3313 3112 1950 97 0 47 chr20 52713215 52713515 -13954490 - AluSx SINE Alu -26 286 1 1207 286 107 32 chr20 52713515 52714133 -13953872 - L2 LINE L2 -201 3112 2396 2340 85 0 3 chr20 52714455 52714760 -13953245 - AluSg SINE Alu -6 304 1 202 211 77 0 chr20 52714960 52715012 -13952993 - MIR SINE MIR -135 73 18 229 250 92 0 chr20 52715259 52715335 -13952670 - Charlie8 DNA MER1_type -2258 159 77 516 289 64 25 chr20 52715356 52715560 -13952445 + L1MC4a LINE L1 5687 5898 -1910 25 31 0 0 chr20 52715649 52715681 -13952324 + AT_rich Low_complexity Low_complexity 1 32 0 2170 119 3 0 chr20 52715684 52715995 -13952010 + AluSx SINE Alu 1 312 0 832 159 0 0 chr20 52716016 52716154 -13951851 + FLAM_C SINE Alu 6 143 0 2182 113 13 0 chr20 52716176 52716485 -13951520 + AluSq SINE Alu 1 313 0 386 250 52 22 chr20 52716639 52716775 -13951230 - MIR SINE MIR -122 140 1 191 353 190 19 chr20 52716934 52717203 -13950802 + L2 LINE L2 2915 3229 -43 251 262 47 28 chr20 52717268 52717375 -13950630 - MIR SINE MIR -81 181 73 268 314 57 21 chr20 52717485 52717625 -13950380 - MIR3 SINE MIR -60 148 4 198 268 51 0 chr20 52718240 52718315 -13949690 - MIR SINE MIR -63 145 111 1861 73 9 126 chr20 52718536 52718853 -13949152 + AluSg SINE Alu 1 280 -30 256 338 123 0 chr20 52718877 52719031 -13948974 - MIR SINE MIR -5 257 85 225 305 76 8 chr20 52719045 52719163 -13948842 - MIR3 SINE MIR -1 207 82 1689 184 3 19 chr20 52719592 52719907 -13948098 + AluJo SINE Alu 1 310 -2 203 229 153 76 chr20 52720884 52721015 -13946990 + MIR SINE MIR 121 261 -1 925 289 45 38 chr20 52721107 52721451 -13946554 + L2 LINE L2 2867 3216 -97 2225 97 0 10 chr20 52721451 52721759 -13946246 - AluSx SINE Alu -7 305 1 925 289 45 38 chr20 52721759 52721836 -13946169 + L2 LINE L2 3216 3291 -22 248 155 17 52 chr20 52721864 52721922 -13946083 - MIR SINE MIR -87 121 66 214 277 0 89 chr20 52722229 52722330 -13945675 - MIR SINE MIR -97 165 74 2234 68 0 0 chr20 52722342 52722660 -13945345 + AluY SINE Alu 2 319 0 242 266 64 32 chr20 52722755 52722849 -13945156 - MIR SINE MIR -133 129 33 34 42 0 0 chr20 52724496 52724544 -13943461 + GC_rich Low_complexity Low_complexity 1 48 0 212 320 27 0 chr20 52725134 52725209 -13942796 - MIR SINE MIR -13 249 173 489 309 157 4 chr20 52725216 52725465 -13942540 + L2 LINE L2 3026 3312 -1 2591 23 0 0 chr20 52725580 52725879 -13942126 + AluY SINE Alu 1 299 -12 1911 117 50 0 chr20 52725888 52726171 -13941834 + AluSq SINE Alu 1 297 -16 25 31 0 0 chr20 52726560 52726592 -13941413 + GC_rich Low_complexity Low_complexity 1 32 0 201 229 313 0 chr20 52726774 52726857 -13941148 - L2 LINE L2 0 3313 3205 285 293 0 0 chr20 52726871 52726946 -13941059 - L2 LINE L2 -257 3056 2982 * 297 164 0 75 chr20 52726937 52727004 -13941001 - L2 LINE L2 -542 2772 2711 2855 3 0 0 chr20 52727004 52727318 -13940687 - AluYb8 SINE Alu -4 314 1 2311 72 0 0 chr20 52727321 52727611 -13940394 - AluSc SINE Alu -16 293 4 2070 130 0 10 chr20 52727613 52727920 -13940085 - AluJb SINE Alu -8 304 1 1864 122 10 81 chr20 52727931 52727947 -13940058 - L1MB7 LINE L1 -16 6168 6152 2205 89 10 0 chr20 52727947 52728239 -13939766 - AluSg SINE Alu -11 299 5 1864 122 10 81 chr20 52728239 52728606 -13939399 - L1MB7 LINE L1 -32 6152 5812 1258 115 0 0 chr20 52728612 52728786 -13939219 - AluSx SINE Alu -138 174 1 267 98 0 0 chr20 52728788 52728829 -13939176 - L1MB7 LINE L1 -809 5365 5325 1025 158 0 6 chr20 52728829 52729000 -13939005 + AluSp SINE Alu 134 303 -10 580 221 18 0 chr20 52729000 52729163 -13938842 - L1MB7 LINE L1 -808 5338 5173 892 168 0 0 chr20 52729170 52729313 -13938692 - FRAM SINE Alu -14 162 20 2048 123 7 3 chr20 52729346 52729648 -13938357 - AluSx SINE Alu -9 303 1 1799 145 14 7 chr20 52729670 52729960 -13938045 - AluJo SINE Alu -20 292 1 1160 105 28 6 chr20 52729963 52730144 -13937861 - L1MC1 LINE L1 -132 6201 6017 2064 82 31 10 chr20 52730733 52731024 -13936981 + AluSc SINE Alu 1 297 -12 297 221 95 35 chr20 52731053 52731195 -13936810 + MLT1L LTR MaLR 108 273 -315 277 297 52 16 chr20 52731232 52731377 -13936628 + MLT1K LTR MaLR 375 502 -86 814 215 55 15 chr20 52731379 52731579 -13936426 + MIR SINE MIR 40 247 -15 2082 113 0 0 chr20 52731579 52731881 -13936124 - AluSx SINE Alu 0 305 4 2146 91 3 3 chr20 52731993 52732302 -13935703 - AluSp SINE Alu 0 309 1 289 164 98 0 chr20 52732443 52732504 -13935501 - MIR SINE MIR -105 157 91 2282 91 0 3 chr20 52732506 52732814 -13935191 - AluY SINE Alu -4 307 1 2245 84 3 19 chr20 52732858 52733169 -13934836 + AluSx SINE Alu 2 307 -5 1045 210 182 67 chr20 52733413 52733484 -13934521 - MLT1J LTR MaLR 0 511 450 338 0 0 23 chr20 52733484 52733527 -13934478 + (CA)n Simple_repeat Simple_repeat 2 43 0 1045 210 182 67 chr20 52733527 52733889 -13934116 - MLT1J LTR MaLR -61 450 28 216 289 0 0 chr20 52734110 52734162 -13933843 - MIR SINE MIR 0 262 211 1434 73 5 10 chr20 52734163 52734355 -13933650 - AluSp SINE Alu -122 191 1 987 196 68 65 chr20 52735233 52735503 -13932502 - L1MC4 LINE L1 -17 8025 7752 2127 101 9 22 chr20 52735503 52735820 -13932185 - AluSq SINE Alu 0 313 1 987 196 68 65 chr20 52735820 52735870 -13932135 - L1MC4 LINE L1 -290 7752 7704 2243 108 0 0 chr20 52736058 52736365 -13931640 + AluSx SINE Alu 1 307 -5 1274 136 36 41 chr20 52736400 52736620 -13931385 + MER20 DNA MER1_type 1 219 0 233 116 0 23 chr20 52737125 52737168 -13930837 + (TTCTC)n Simple_repeat Simple_repeat 5 46 0 1614 140 52 88 chr20 52737170 52737470 -13930535 - L1MB3 LINE L1 -328 5855 5546 2048 113 3 0 chr20 52737470 52737790 -13930215 - AluSq SINE Alu 0 321 1 1614 140 52 88 chr20 52737790 52737856 -13930149 - L1MB3 LINE L1 -637 5546 5499 2016 112 0 3 chr20 52737856 52738162 -13929843 - AluSx SINE Alu 0 305 1 1521 189 19 30 chr20 52738162 52738470 -13929535 - L1MB3 LINE L1 -1676 4470 4165 2455 53 0 3 chr20 52738470 52738773 -13929232 - AluY SINE Alu -9 302 1 1521 189 19 30 chr20 52738773 52738835 -13929170 - L1MB3 LINE L1 -1981 4165 4104 1923 119 35 0 chr20 52738845 52739130 -13928875 - AluJb SINE Alu -17 295 1 412 278 46 52 chr20 52739130 52739324 -13928681 + MLT1J LTR MaLR 284 476 -35 1674 181 0 10 chr20 52739502 52739795 -13928210 - AluJb SINE Alu -22 290 1 824 165 30 0 chr20 52739797 52739930 -13928075 - FLAM_C SINE Alu -5 138 2 330 298 19 10 chr20 52739935 52740039 -13927966 + MIR SINE MIR 35 139 -123 237 295 71 23 chr20 52740071 52740235 -13927770 + L1MB4 LINE L1 5599 5783 -338 427 250 47 87 chr20 52740467 52740575 -13927430 + MIR SINE MIR 41 141 -121 2318 90 0 0 chr20 52740575 52740876 -13927129 + AluSg SINE Alu 1 301 -9 427 250 47 87 chr20 52740876 52740939 -13927066 + MIR SINE MIR 141 205 -57 522 277 84 55 chr20 52740991 52741107 -13926898 - L2 LINE L2 -54 3259 3148 1577 158 12 73 chr20 52741107 52741435 -13926570 - AluSx SINE Alu -4 308 1 522 277 84 55 chr20 52741435 52741556 -13926449 - L2 LINE L2 -165 3148 3015 314 271 106 0 chr20 52741822 52741907 -13926098 + MIR SINE MIR 81 174 -88 1604 182 89 39 chr20 52741912 52742024 -13925981 + MLT1B LTR MaLR 1 106 -284 2031 132 0 0 chr20 52742024 52742320 -13925685 + AluSx SINE Alu 1 296 -16 1604 182 89 39 chr20 52742320 52742565 -13925440 + MLT1B LTR MaLR 106 376 -14 548 259 98 26 chr20 52742872 52743138 -13924867 - LTR33A LTR ERVL 0 523 239 273 313 124 21 chr20 52743287 52743520 -13924485 + LTR33A LTR ERVL 263 519 -4 1328 191 97 29 chr20 52743684 52743933 -13924072 + L1MB4 LINE L1 5817 6097 -83 1970 124 0 16 chr20 52743933 52744239 -13923766 - AluJo SINE Alu -6 306 6 1328 191 97 29 chr20 52744239 52744330 -13923675 + L1MB4 LINE L1 6097 6180 0 492 117 117 117 chr20 52744333 52744370 -13923635 + MER65A LTR ERV1 1 37 -408 2243 70 40 3 chr20 52744370 52744669 -13923336 - AluY SINE Alu -1 310 1 492 117 117 117 chr20 52744669 52744776 -13923229 + MER65A LTR ERV1 36 145 -300 2113 121 0 10 chr20 52744777 52745091 -13922914 + AluSx SINE Alu 1 311 -1 * 2169 96 10 0 chr20 52745090 52745381 -13922624 + AluSp SINE Alu 1 294 -19 1181 148 45 5 chr20 52745383 52745585 -13922420 - AluJo SINE Alu -20 292 83 2091 104 0 0 chr20 52745634 52745943 -13922062 - AluSg SINE Alu 0 309 1 1077 171 0 0 chr20 52745959 52746140 -13921865 - FRAM SINE Alu 0 176 1 252 59 0 0 chr20 52746195 52746229 -13921776 + (TG)n Simple_repeat Simple_repeat 1 34 0 250 162 263 0 chr20 52746252 52746351 -13921654 + L1MC4 LINE L1 7918 8042 0 2235 106 0 0 chr20 52746373 52746675 -13921330 + AluSx SINE Alu 2 303 -9 1769 153 37 10 chr20 52747583 52747877 -13920128 + AluJb SINE Alu 1 302 -10 735 216 26 7 chr20 52747877 52748030 -13919975 + AluJb SINE Alu 134 289 -23 233 184 0 20 chr20 52748069 52748118 -13919887 - L1ME LINE L1 -452 5669 5622 1973 136 26 0 chr20 52748159 52748461 -13919544 - AluSx SINE Alu -2 310 1 251 308 28 19 chr20 52748579 52748618 -13919387 - L1ME2 LINE L1 -15 6149 6112 2028 131 3 0 chr20 52748618 52748924 -13919081 - AluSx SINE Alu -5 307 1 251 308 28 19 chr20 52748924 52748991 -13919014 - L1ME2 LINE L1 -52 6112 6042 1353 199 127 47 chr20 52748995 52749422 -13918583 + MLT1C LTR MaLR 6 466 -1 613 272 82 0 chr20 52749432 52749627 -13918378 - L1ME2 LINE L1 -125 6039 5829 2261 58 0 76 chr20 52749707 52750036 -13917969 - AluSp SINE Alu -9 304 1 185 108 27 0 chr20 52750216 52750253 -13917752 + (GGGTG)n Simple_repeat Simple_repeat 4 41 0 1821 158 3 10 chr20 52750639 52750942 -13917063 - AluJb SINE Alu -11 301 1 2147 100 0 17 chr20 52750957 52751258 -13916747 - AluSx SINE Alu -16 296 1 216 0 0 0 chr20 52751354 52751378 -13916627 + (A)n Simple_repeat Simple_repeat 1 24 0 451 181 32 0 chr20 52751604 52751698 -13916307 + MLT1G LTR MaLR 452 548 -42 1852 134 3 65 chr20 52751712 52752033 -13915972 + AluSx SINE Alu 1 301 -11 488 198 0 0 chr20 52752036 52752122 -13915883 + L1M2 LINE L1 5610 5695 -605 403 219 7 0 chr20 52752119 52752204 -13915801 + L1M2 LINE L1 5642 5732 -570 * 911 173 68 0 chr20 52752313 52752475 -13915530 + FAM SINE Alu 1 173 -2 25 65 0 0 chr20 52752645 52752691 -13915314 + AT_rich Low_complexity Low_complexity 1 46 0 483 123 0 37 chr20 52752695 52752762 -13915243 - AluJo SINE Alu -112 200 135 2169 101 0 26 chr20 52752762 52753069 -13914936 - AluSg SINE Alu -11 299 1 483 123 0 37 chr20 52753069 52753082 -13914923 - AluJo SINE Alu -177 135 123 793 208 0 0 chr20 52753082 52753236 -13914769 - MER3 DNA MER1_type -55 154 1 2880 60 8 13 chr20 52753456 52753838 -13914167 - L1PA4 LINE L1 -1 6154 5775 887 131 0 36 chr20 52754059 52754084 -13913921 - AluJo SINE Alu -170 132 108 2379 34 51 0 chr20 52754084 52754379 -13913626 + AluYa5 SINE Alu 1 310 -1 887 131 0 36 chr20 52754379 52754490 -13913515 - AluJo SINE Alu -194 108 1 2738 130 40 9 chr20 52754501 52754946 -13913059 - L1MB3 LINE L1 0 6183 5725 1279 103 0 0 chr20 52754946 52755120 -13912885 - AluSg/x SINE Alu -7 305 132 1968 147 111 74 chr20 52755120 52755384 -13912621 - L1MB3 LINE L1 -446 5737 5484 1143 98 18 0 chr20 52755384 52755548 -13912457 - L1MA5 LINE L1 0 6300 6134 1722 120 0 0 chr20 52755555 52755797 -13912208 - AluSx SINE Alu -16 296 55 1968 147 111 74 chr20 52755797 52756049 -13911956 - L1MB3 LINE L1 -704 5479 5190 2037 126 0 20 chr20 52756051 52756353 -13911652 - AluSx SINE Alu -16 296 1 591 181 111 47 chr20 52756379 52756550 -13911455 + L2 LINE L2 2889 3070 -243 1159 173 53 0 chr20 52756564 52756772 -13911233 + AluJb SINE Alu 85 303 -9 465 301 84 30 chr20 52756810 52757013 -13910992 + L2 LINE L2 3099 3312 -1 285 221 58 29 chr20 52757245 52757349 -13910656 - MIR3 SINE MIR -1 207 101 206 290 7 131 chr20 52757343 52757488 -13910517 + MIR SINE MIR 9 135 -127 * 197 198 36 0 chr20 52757577 52757630 -13910375 - MIR SINE MIR -58 150 108 716 215 30 60 chr20 52758006 52758206 -13909799 - Charlie8 DNA MER1_type -2219 198 5 202 292 92 0 chr20 52758643 52758708 -13909297 + MIR SINE MIR 75 145 -63 386 224 0 13 chr20 52758788 52758864 -13909141 + MIR SINE MIR 84 158 -104 780 169 0 22 chr20 52758868 52759004 -13909001 + AluJo SINE Alu 2 134 -178 240 253 12 12 chr20 52759005 52759088 -13908917 + MIR SINE MIR 134 216 -46 193 250 0 0 chr20 52759212 52759252 -13908753 - MIR SINE MIR -88 120 81 584 307 110 26 chr20 52759289 52759598 -13908407 - L2 LINE L2 -1 3271 2937 258 220 102 0 chr20 52760731 52760790 -13907215 - MIR SINE MIR -83 125 61 24 91 0 0 chr20 52761353 52761419 -13906586 + GC_rich Low_complexity Low_complexity 1 66 0 21 36 0 0 chr20 52761508 52761536 -13906469 + GC_rich Low_complexity Low_complexity 1 28 0 219 191 24 0 chr20 52761677 52761719 -13906286 + (CAG)n Simple_repeat Simple_repeat 1 43 0 42 36 0 0 chr20 52761925 52761981 -13906024 + GC_rich Low_complexity Low_complexity 1 56 0 21 36 0 0 chr20 52762042 52762070 -13905935 + GC_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr20 52762097 52762124 -13905881 + GC_rich Low_complexity Low_complexity 1 27 0 180 77 0 0 chr20 52762280 52762306 -13905699 + (CCG)n Simple_repeat Simple_repeat 2 27 0 24 0 0 0 chr20 52762363 52762387 -13905618 + GC_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr20 52762543 52762565 -13905440 + GC_rich Low_complexity Low_complexity 1 22 0 23 54 0 0 chr20 52762834 52762871 -13905134 + GC_rich Low_complexity Low_complexity 1 37 0 201 94 0 0 chr20 52762886 52762918 -13905087 + (CCCCCG)n Simple_repeat Simple_repeat 1 32 0 33 25 0 0 chr20 52762974 52763014 -13904991 + AT_rich Low_complexity Low_complexity 1 40 0 189 0 0 0 chr20 52763283 52763304 -13904701 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 244 218 26 77 chr20 52764348 52764426 -13903579 + MIR SINE MIR 189 262 0 258 325 17 26 chr20 52764486 52764603 -13903402 - MIR SINE MIR -21 241 126 269 326 23 16 chr20 52766339 52766468 -13901537 - MIR SINE MIR -74 188 59 1733 135 34 24 chr20 52766524 52766821 -13901184 + AluSx SINE Alu 1 300 -12 427 241 11 0 chr20 52766908 52766995 -13901010 - L2 LINE L2 -1 3271 3184 414 309 116 17 chr20 52767192 52767265 -13900740 - MIR SINE MIR -14 248 184 2075 126 7 0 chr20 52767265 52767567 -13900438 - AluSx SINE Alu -8 304 1 414 309 116 17 chr20 52767567 52767674 -13900331 - MIR SINE MIR -78 184 50 286 242 121 68 chr20 52768005 52768137 -13899868 - MIR3 SINE MIR -65 143 5 240 336 0 7 chr20 52768172 52768282 -13899723 + MIR SINE MIR 33 139 -69 361 237 57 34 chr20 52768443 52768620 -13899385 - L2 LINE L2 -262 3010 2830 759 194 40 14 chr20 52769624 52769808 -13898197 + MIR SINE MIR 71 262 0 458 320 33 33 chr20 52769832 52769883 -13898122 + MIR SINE MIR 16 66 -196 2150 110 10 0 chr20 52769883 52770184 -13897821 - AluSg SINE Alu -6 304 1 458 320 33 33 chr20 52770184 52770313 -13897692 + MIR SINE MIR 65 196 -66 1174 249 58 111 chr20 52770391 52770904 -13897101 + MLT1J LTR MaLR 26 511 0 1569 242 68 38 chr20 52771944 52772408 -13895597 - L1ME3A LINE L1 -8 6162 5679 2052 118 10 3 chr20 52772408 52772714 -13895291 - AluSx SINE Alu -3 309 2 1569 242 68 38 chr20 52772714 52772778 -13895227 - L1ME3A LINE L1 -491 5679 5618 2008 261 104 26 chr20 52772896 52773129 -13894876 - L1MC4 LINE L1 -136 7906 7693 2102 118 3 10 chr20 52773129 52773442 -13894563 - AluJo SINE Alu -1 311 1 2008 261 104 26 chr20 52773442 52774776 -13893229 - L1MC4 LINE L1 -349 7693 5896 180 0 0 0 chr20 52774776 52774796 -13893209 + (CA)n Simple_repeat Simple_repeat 2 21 0 2008 261 104 26 chr20 52774796 52775093 -13892912 - L1MC4 LINE L1 -2146 5896 5624 277 347 17 26 chr20 52775083 52775283 -13892722 - L1MC/D LINE L1 -297 5824 5670 * 654 324 138 3 chr20 52775297 52775667 -13892338 - LTR16A LTR ERVL -28 422 3 360 308 28 9 chr20 52775921 52776028 -13891977 + MIR SINE MIR 37 145 -63 565 209 123 61 chr20 52776106 52776204 -13891801 + L1MC4 LINE L1 7363 7453 -332 1889 82 22 19 chr20 52776204 52776473 -13891532 + AluSc SINE Alu 33 302 -7 565 209 123 61 chr20 52776473 52776600 -13891405 + L1MC4 LINE L1 7453 7557 -228 222 37 0 0 chr20 52776841 52776868 -13891137 + (TTCA)n Simple_repeat Simple_repeat 4 30 0 831 219 16 16 chr20 52776871 52777063 -13890942 + MIR SINE MIR 70 261 -1 2142 104 3 0 chr20 52777522 52777819 -13890186 + AluSx SINE Alu 1 298 -14 268 285 108 8 chr20 52777826 52777956 -13890049 - L1MC4 LINE L1 -64 7978 7836 935 238 52 64 chr20 52777978 52778239 -13889766 + L1ME3 LINE L1 5836 6095 -67 1824 153 0 3 chr20 52778239 52778551 -13889454 + AluJo SINE Alu 1 311 0 935 238 52 64 chr20 52778551 52778616 -13889389 + L1ME3 LINE L1 6095 6159 -3 361 229 48 38 chr20 52778826 52778931 -13889074 - MIR SINE MIR -141 121 16 473 343 56 17 chr20 52779183 52779416 -13888589 + MIR SINE MIR 21 262 0 600 205 20 53 chr20 52779609 52779710 -13888295 + MER45A DNA AcHobo 1 104 -1477 1576 182 0 85 chr20 52779710 52779879 -13888126 - AluJo SINE Alu 0 302 120 1829 132 22 29 chr20 52779879 52780053 -13887952 - AluSx SINE Alu -2 310 136 438 20 0 0 chr20 52780053 52780104 -13887901 + (TA)n Simple_repeat Simple_repeat 1 51 0 2348 90 0 3 chr20 52780105 52780415 -13887590 - AluSc SINE Alu 0 309 1 1829 132 22 29 chr20 52780415 52780549 -13887456 - AluSx SINE Alu -175 137 2 2087 120 10 3 chr20 52780551 52780860 -13887145 - AluSq SINE Alu -2 311 1 1576 182 0 85 chr20 52780860 52781017 -13886988 - AluJo SINE Alu -183 119 1 600 205 20 53 chr20 52781017 52781066 -13886939 + MER45A DNA AcHobo 104 146 -32 208 175 25 0 chr20 52781170 52781210 -13886795 + MIR SINE MIR 104 144 -118 30 0 0 0 chr20 52781402 52781432 -13886573 + AT_rich Low_complexity Low_complexity 1 30 0 872 106 68 0 chr20 52781439 52781597 -13886408 + L1PA10 LINE L1 6008 6174 0 867 200 19 6 chr20 52781597 52781757 -13886248 - AluJo SINE Alu -30 282 121 1116 265 90 80 chr20 52782030 52782101 -13885904 - L1ME3A LINE L1 -54 6116 6047 2105 120 0 7 chr20 52782101 52782400 -13885605 - AluSx SINE Alu -15 297 1 1116 265 90 80 chr20 52782400 52782750 -13885255 - L1ME3A LINE L1 -123 6047 5702 979 199 0 0 chr20 52782750 52782916 -13885089 - FRAM SINE Alu 0 166 1 1116 265 90 80 chr20 52782916 52783085 -13884920 - L1ME3A LINE L1 -468 5702 5514 2036 121 3 26 chr20 52783085 52783398 -13884607 - AluSx SINE Alu -6 306 1 1116 265 90 80 chr20 52783398 52783507 -13884498 - L1ME3A LINE L1 -656 5514 5408 197 273 130 0 chr20 52784135 52784212 -13883793 + L2 LINE L2 3225 3311 -2 499 301 61 82 chr20 52784213 52784691 -13883314 - L2 LINE L2 -20 3293 2826 182 380 0 0 chr20 52784797 52784868 -13883137 + MIR SINE MIR 179 249 -13 830 188 0 25 chr20 52784908 52785068 -13882937 - FRAM SINE Alu -21 155 1 357 328 39 0 chr20 52785361 52785489 -13882516 + L2 LINE L2 3180 3312 -1 183 162 0 0 chr20 52785518 52785555 -13882450 + (TGGA)n Simple_repeat Simple_repeat 3 39 0 216 163 0 0 chr20 52785586 52785629 -13882376 + (TGGG)n Simple_repeat Simple_repeat 2 44 0 187 234 31 62 chr20 52786059 52786123 -13881882 - MER5A DNA MER1_type -73 116 55 415 330 146 23 chr20 52786295 52786644 -13881361 + L1MC4a LINE L1 5694 6085 -1723 268 198 11 11 chr20 52787047 52787138 -13880867 + GA-rich Low_complexity Low_complexity 2 92 0 367 320 93 55 chr20 52787692 52788241 -13879764 + L2 LINE L2 2634 3246 -26 216 0 0 0 chr20 52788358 52788382 -13879623 + (CCCCAG)n Simple_repeat Simple_repeat 6 29 0 255 270 16 0 chr20 52789007 52789070 -13878935 + MIR SINE MIR 115 178 -84 596 299 116 48 chr20 52789140 52789284 -13878721 + L2 LINE L2 2550 2683 -589 2023 106 0 0 chr20 52789284 52789557 -13878448 + AluSx SINE Alu 1 273 -39 192 40 0 0 chr20 52789565 52789590 -13878415 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 596 299 116 48 chr20 52789590 52789885 -13878120 + L2 LINE L2 2689 2962 -310 1082 261 97 19 chr20 52789885 52790306 -13877699 + LTR16A1 LTR ERVL 2 455 -2 596 299 116 48 chr20 52790306 52790534 -13877471 + L2 LINE L2 2962 3272 0 549 251 207 16 chr20 52790567 52790818 -13877187 - MLT1L LTR MaLR -149 466 168 253 307 7 7 chr20 52791135 52791275 -13876730 + GA-rich Low_complexity Low_complexity 2 141 0 512 314 71 5 chr20 52791874 52792084 -13875921 + MIR SINE MIR 29 252 -10 267 318 116 0 chr20 52792145 52792274 -13875731 - MIR SINE MIR -105 157 14 1503 271 78 7 chr20 52792639 52793498 -13874507 + L2 LINE L2 2390 3313 0 234 310 96 42 chr20 52793607 52793846 -13874159 + L2 LINE L2 3039 3290 -23 1018 260 101 3 chr20 52794345 52794653 -13873352 + MER102b DNA MER1_type 4 341 0 317 257 168 0 chr20 52794756 52794857 -13873148 - L2 LINE L2 -3 3310 3193 577 299 89 6 chr20 52795842 52796123 -13871882 - L2 LINE L2 -270 3002 2705 2139 122 3 0 chr20 52796152 52796455 -13871550 + AluSx SINE Alu 1 304 -8 557 312 25 25 chr20 52796496 52796695 -13871310 + L2 LINE L2 3114 3312 -1 575 265 59 0 chr20 52796933 52797103 -13870902 - MIR SINE MIR -70 192 13 372 262 57 14 chr20 52797104 52797245 -13870760 + MIR SINE MIR 31 145 -63 780 273 12 59 chr20 52797937 52798073 -13869932 + MIR SINE MIR 16 136 -126 2231 110 7 0 chr20 52798073 52798382 -13869623 + AluSx SINE Alu 1 311 -1 780 273 12 59 chr20 52798382 52798501 -13869504 + MIR SINE MIR 136 259 -3 495 285 98 34 chr20 52798515 52798750 -13869255 + MIR SINE MIR 7 256 -6 224 294 21 20 chr20 52798764 52798907 -13869098 + MIR SINE MIR 5 239 -23 1586 138 50 18 chr20 52799190 52799472 -13868533 - AluJo SINE Alu -21 291 1 261 304 0 38 chr20 52799731 52799810 -13868195 + LTR67 LTR ERVL 3 78 -479 411 315 123 18 chr20 52799970 52800189 -13867816 + L2 LINE L2 2717 2958 -356 295 217 0 17 chr20 52800444 52800504 -13867501 + MER106B DNA MER1_type 15 73 -986 2250 82 0 0 chr20 52800530 52800843 -13867162 + AluSx SINE Alu 1 312 0 329 315 7 20 chr20 52800843 52801043 -13866962 + (CAACT)n Simple_repeat Simple_repeat 1 197 0 301 253 6 11 chr20 52801065 52801239 -13866766 + (CAGCT)n Simple_repeat Simple_repeat 4 176 0 2356 79 3 0 chr20 52801269 52801572 -13866433 - AluSp SINE Alu -9 304 1 1805 162 0 25 chr20 52801575 52801890 -13866115 - AluJb SINE Alu -5 307 1 228 272 172 7 chr20 52802147 52802443 -13865562 - L2 LINE L2 -271 3001 2646 764 204 133 19 chr20 52802542 52802753 -13865252 - MIR SINE MIR 0 262 28 2067 118 0 32 chr20 52803018 52803331 -13864674 - AluSx SINE Alu -9 303 1 557 282 183 22 chr20 52803406 52803919 -13864086 + L2 LINE L2 2721 3300 -13 240 86 0 0 chr20 52803922 52803957 -13864048 + (TGAA)n Simple_repeat Simple_repeat 4 38 0 224 245 0 0 chr20 52804278 52804327 -13863678 - MIR SINE MIR -135 127 79 202 250 0 19 chr20 52805146 52805198 -13862807 + MIR3 SINE MIR 115 165 -43 255 211 35 0 chr20 52805237 52805294 -13862711 + MIR SINE MIR 63 121 -87 930 199 31 5 chr20 52805659 52805855 -13862150 - L1ME1 LINE L1 -4 6162 5962 1006 277 43 43 chr20 52805863 52806304 -13861701 - L1MC4 LINE L1 0 8042 7602 673 37 0 0 chr20 52806335 52806417 -13861588 - AluSg/x SINE Alu -10 299 218 587 254 42 12 chr20 52806700 52806865 -13861140 + MIR SINE MIR 51 220 -42 605 256 176 16 chr20 52807228 52807529 -13860476 - L1MC4a LINE L1 -532 5651 5605 1721 79 0 37 chr20 52807529 52807770 -13860235 + AluY SINE Alu 58 289 -22 605 256 176 16 chr20 52807770 52807801 -13860204 - L1MC4a LINE L1 -578 5605 5580 1918 140 3 7 chr20 52807803 52808111 -13859894 - AluJb SINE Alu 0 312 6 345 235 180 22 chr20 52808120 52808254 -13859751 - L1P1 LINE L1 -331 5824 5668 366 245 10 49 chr20 52808479 52808581 -13859424 + MER5A DNA MER1_type 9 106 -83 182 319 99 50 chr20 52808505 52808587 -13859418 - MER5B DNA MER1_type -24 154 61 * 2019 116 7 13 chr20 52808587 52808890 -13859115 - AluSx SINE Alu -11 301 1 182 319 99 50 chr20 52808890 52808948 -13859057 - MER5B DNA MER1_type -117 61 7 637 222 50 50 chr20 52809017 52809215 -13858790 + MIR SINE MIR 46 243 -19 235 250 43 55 chr20 52809278 52809442 -13858563 + (TCTCTG)n Simple_repeat Simple_repeat 5 166 0 2228 110 3 0 chr20 52809697 52810007 -13857998 - AluSx SINE Alu -1 311 1 633 311 85 28 chr20 52810166 52810520 -13857485 - L2 LINE L2 -29 3284 2911 345 277 36 0 chr20 52810579 52810691 -13857314 + MIR SINE MIR 74 189 -73 221 236 18 0 chr20 52810883 52810938 -13857067 + MIR SINE MIR 182 237 -25 520 129 0 12 chr20 52811395 52811503 -13856502 + AluS SINE Alu 222 309 0 1510 251 148 22 chr20 52811591 52811630 -13856375 - L1ME3 LINE L1 -3 6159 6126 1698 101 0 0 chr20 52811630 52811867 -13856138 - AluY SINE Alu -11 300 64 1510 251 148 22 chr20 52811867 52812362 -13855643 - L1ME3 LINE L1 -36 6126 5558 474 33 0 0 chr20 52812380 52812440 -13855565 + (CA)n Simple_repeat Simple_repeat 2 61 0 585 264 42 0 chr20 52812878 52813045 -13854960 + MIR SINE MIR 28 201 -61 * 654 242 81 16 chr20 52813025 52813211 -13854794 + MIR SINE MIR 16 213 -49 181 263 53 0 chr20 52813413 52813470 -13854535 + MIR SINE MIR 117 176 -86 255 278 33 11 chr20 52814386 52814476 -13853529 + MIR3 SINE MIR 81 172 -36 369 0 0 0 chr20 52814505 52814546 -13853459 + (TTCA)n Simple_repeat Simple_repeat 2 42 0 425 221 150 0 chr20 52814575 52814725 -13853280 - MER45A DNA AcHobo 0 178 1 184 359 39 19 chr20 52814726 52814829 -13853176 - L2 LINE L2 -24 3248 3144 471 293 116 28 chr20 52814984 52815199 -13852806 - MIR SINE MIR 0 262 29 332 265 81 37 chr20 52815618 52815754 -13852251 + L3 LINE CR1 1406 1547 -30 355 282 39 95 chr20 52815845 52816129 -13851876 - L1MC4a LINE L1 -1746 6062 5795 296 316 6 51 chr20 52816446 52816604 -13851401 - L2 LINE L2 -181 3091 2941 662 244 113 48 chr20 52816648 52816878 -13851127 - MIR SINE MIR -12 250 6 449 303 33 26 chr20 52817358 52817510 -13850495 - MIR SINE MIR -74 188 36 395 274 121 0 chr20 52818141 52818265 -13849740 - MIR SINE MIR -21 241 103 238 238 63 0 chr20 52818424 52818487 -13849518 + MIR SINE MIR 106 172 -90 349 279 9 36 chr20 52819717 52819828 -13848177 + MIR SINE MIR 44 151 -111 1744 187 0 0 chr20 52819902 52820212 -13847793 - AluJb SINE Alu -2 310 1 1830 139 28 0 chr20 52820233 52820521 -13847484 - AluSq SINE Alu -17 296 1 1733 128 66 4 chr20 52820521 52820795 -13847210 - AluSx SINE Alu -21 291 1 955 125 0 0 chr20 52820937 52821073 -13846932 - AluSq/x SINE Alu -177 136 1 2024 145 0 0 chr20 52821142 52821445 -13846560 + AluSx SINE Alu 1 303 -9 296 319 62 7 chr20 52822050 52822194 -13845811 - HAL1 LINE L1 -748 1759 1608 1166 159 0 11 chr20 52822370 52822559 -13845446 + AluJb SINE Alu 114 300 -12 2273 82 0 20 chr20 52822631 52822937 -13845068 - AluSx SINE Alu -12 300 1 331 234 178 9 chr20 52823165 52823272 -13844733 + L2 LINE L2 3147 3271 -1 386 269 39 62 chr20 52823412 52823620 -13844385 - L1ME3A LINE L1 0 6170 5968 446 302 36 16 chr20 52823718 52823910 -13844095 - L1MC5 LINE L1 -446 7515 7320 817 111 0 0 chr20 52824306 52824423 -13843582 + AluSg/x SINE Alu 180 296 -14 541 278 30 83 chr20 52824713 52824834 -13843171 - MER113 DNA MER1_type? -83 438 312 2327 77 0 0 chr20 52824834 52825133 -13842872 - AluSc SINE Alu -1 308 10 541 278 30 83 chr20 52825133 52825249 -13842756 - MER113 DNA MER1_type? -209 312 191 2026 123 3 7 chr20 52825249 52825542 -13842463 - AluSx SINE Alu -20 292 1 2150 127 0 0 chr20 52825542 52825850 -13842155 - AluSg SINE Alu -1 309 2 541 278 30 83 chr20 52825850 52826009 -13841996 - MER113 DNA MER1_type? -328 193 61 553 352 17 13 chr20 52826049 52826279 -13841726 + MIR SINE MIR 15 245 -17 501 272 82 46 chr20 52826261 52826456 -13841549 - MIR SINE MIR -59 203 2 * 669 123 0 0 chr20 52826460 52826566 -13841439 + (TCCA)n Simple_repeat Simple_repeat 4 109 0 354 240 80 10 chr20 52826642 52826742 -13841263 + MIR SINE MIR 49 155 -107 322 299 153 23 chr20 52826857 52827118 -13840887 + L2 LINE L2 2819 3113 -159 465 303 30 18 chr20 52827326 52827491 -13840514 + MIR SINE MIR 79 245 -17 402 244 0 0 chr20 52827538 52827624 -13840381 - MER96 DNA MER1_type? 0 175 90 213 231 77 0 chr20 52827710 52827762 -13840243 + MIR SINE MIR 110 165 -97 545 309 52 48 chr20 52828017 52828266 -13839739 - MIR SINE MIR -11 251 2 569 106 21 0 chr20 52828270 52828364 -13839641 + (TCCA)n Simple_repeat Simple_repeat 2 97 0 680 219 40 35 chr20 52828364 52828565 -13839440 - L2 LINE L2 0 3313 3112 1783 138 0 30 chr20 52828569 52828865 -13839140 + AluJo SINE Alu 1 287 -25 2081 100 24 0 chr20 52828865 52829154 -13838851 + AluSx SINE Alu 1 296 -16 205 138 0 0 chr20 52829156 52829185 -13838820 + (CAG)n Simple_repeat Simple_repeat 1 29 0 799 110 13 16 chr20 52830785 52831022 -13836983 + AluSq SINE Alu 1 305 -8 300 344 37 55 chr20 52831143 52831306 -13836699 + L1MCa LINE L1 1168 1327 -5099 2033 126 0 0 chr20 52831306 52831620 -13836385 + AluSx SINE Alu 1 314 0 2037 105 14 0 chr20 52831983 52832269 -13835736 + AluSx SINE Alu 1 290 -22 317 243 243 47 chr20 52832437 52832585 -13835420 + MIR SINE MIR 21 197 -65 992 217 85 33 chr20 52832724 52832996 -13835009 + MLT1K LTR MaLR 293 578 -10 572 287 49 6 chr20 52833178 52833199 -13834806 - MIR SINE MIR -82 180 161 905 249 0 0 chr20 52833199 52833376 -13834629 + MER45A DNA AcHobo 1 177 -1 572 287 49 6 chr20 52833376 52833518 -13834487 - MIR SINE MIR -101 161 10 280 157 14 57 chr20 52833627 52833697 -13834308 - LTR67 LTR ERVL -1 556 490 215 198 108 108 chr20 52834033 52834144 -13833861 - MIR SINE MIR -65 143 33 511 220 69 53 chr20 52834636 52834837 -13833168 + MIR SINE MIR 7 198 -10 708 301 193 0 chr20 52835416 52835748 -13832257 - MLT1K LTR MaLR -67 521 126 890 250 95 60 chr20 52835787 52836076 -13831929 + MLT1H LTR MaLR 24 328 -221 207 0 0 0 chr20 52836133 52836156 -13831849 + (A)n Simple_repeat Simple_repeat 1 23 0 575 222 118 74 chr20 52836190 52836239 -13831766 + MIR SINE MIR 41 86 -176 1637 233 42 42 chr20 52836239 52836736 -13831269 - MLT1D LTR MaLR -4 501 5 575 222 118 74 chr20 52836736 52836889 -13831116 + MIR SINE MIR 86 252 -10 1780 142 0 38 chr20 52836912 52837228 -13830777 + AluJb SINE Alu 1 304 -8 294 301 0 48 chr20 52837242 52837345 -13830660 + L2 LINE L2 3200 3297 -16 300 227 0 0 chr20 52837356 52837422 -13830583 + MIR SINE MIR 69 134 -74 269 326 30 30 chr20 52837800 52837932 -13830073 - MIR3 SINE MIR -47 161 30 218 291 12 23 chr20 52838066 52838152 -13829853 - L2 LINE L2 -518 2796 2712 208 232 42 147 chr20 52838158 52838253 -13829752 + MER5A DNA MER1_type 7 91 -98 681 286 23 5 chr20 52838359 52838576 -13829429 + MIR SINE MIR 40 260 -2 185 329 20 14 chr20 52838569 52838715 -13829290 - L2 LINE L2 -608 2706 2560 * 508 264 102 37 chr20 52838859 52838948 -13829057 - MIR SINE MIR -17 245 163 1192 212 9 0 chr20 52838948 52839165 -13828840 - MER20 DNA MER1_type 0 219 1 508 264 102 37 chr20 52839165 52839291 -13828714 - MIR SINE MIR -99 163 16 576 254 42 12 chr20 52889690 52889855 -13778150 + MIR SINE MIR 51 220 -42 580 253 176 16 chr20 52890218 52890519 -13777486 - L1MC4a LINE L1 -532 5651 5605 1829 79 0 37 chr20 52890519 52890760 -13777245 + AluY SINE Alu 58 289 -22 580 253 176 16 chr20 52890760 52890791 -13777214 - L1MC4a LINE L1 -578 5605 5580 2042 140 3 7 chr20 52890793 52891101 -13776904 - AluJb SINE Alu 0 312 6 333 235 180 22 chr20 52891110 52891244 -13776761 - L1P1 LINE L1 -331 5824 5668 357 245 10 49 chr20 52891469 52891571 -13776434 + MER5A DNA MER1_type 9 106 -83 2143 116 7 13 chr20 52891577 52891880 -13776125 - AluSx SINE Alu -11 301 1 622 222 50 50 chr20 52892007 52892205 -13775800 + MIR SINE MIR 46 243 -19 235 250 43 55 chr20 52892268 52892432 -13775573 + (TCTCTG)n Simple_repeat Simple_repeat 5 166 0 2365 107 3 0 chr20 52892689 52892997 -13775008 - AluSx SINE Alu -3 309 1 597 311 85 28 chr20 52893156 52893510 -13774495 - L2 LINE L2 -29 3284 2911 346 264 38 0 chr20 52893575 52893681 -13774324 + MIR SINE MIR 80 189 -73 214 236 18 0 chr20 52893873 52893928 -13774077 + MIR SINE MIR 182 237 -25 521 129 0 12 chr20 52894385 52894445 -13773560 + AluS SINE Alu 222 282 -27 217 0 0 0 chr20 52894445 52894469 -13773536 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 521 129 0 12 chr20 52894469 52894493 -13773512 + AluS SINE Alu 282 305 -4 1376 251 148 22 chr20 52894581 52894620 -13773385 - L1ME3 LINE L1 -3 6159 6126 1797 98 0 0 chr20 52894620 52894857 -13773148 - AluY SINE Alu -13 298 64 1376 251 148 22 chr20 52894857 52895352 -13772653 - L1ME3 LINE L1 -36 6126 5558 474 33 0 0 chr20 52895370 52895430 -13772575 + (CA)n Simple_repeat Simple_repeat 2 61 0 317 359 34 68 chr20 52895478 52895715 -13772290 - L1ME3 LINE L1 -234 5928 5700 619 264 42 0 chr20 52895868 52896035 -13771970 + MIR SINE MIR 28 201 -61 * 669 238 73 44 chr20 52896015 52896221 -13771784 + MIR SINE MIR 16 227 -35 188 297 55 22 chr20 52896369 52896460 -13771545 + MIR SINE MIR 83 176 -86 191 185 93 102 chr20 52896743 52896851 -13771154 + MIR SINE MIR 35 141 -67 251 297 74 27 chr20 52897318 52897466 -13770539 + MIR3 SINE MIR 18 172 -36 369 0 0 0 chr20 52897495 52897536 -13770469 + (TTCA)n Simple_repeat Simple_repeat 2 42 0 385 209 100 0 chr20 52897565 52897675 -13770330 - MER45A DNA AcHobo 0 178 58 203 359 39 19 chr20 52897716 52897819 -13770186 - L2 LINE L2 -24 3248 3144 518 293 116 28 chr20 52897974 52898189 -13769816 - MIR SINE MIR 0 262 29 362 333 66 33 chr20 52898501 52898744 -13769261 + L3 LINE CR1 1297 1547 -30 344 266 20 96 chr20 52898920 52899119 -13768886 - L1MC4a LINE L1 -1830 5978 5795 315 323 6 51 chr20 52899436 52899594 -13768411 - L2 LINE L2 -181 3091 2941 678 252 109 43 chr20 52899638 52899868 -13768137 - MIR SINE MIR -12 250 6 469 306 94 0 chr20 52900348 52900508 -13767497 - MIR SINE MIR -74 188 14 412 274 121 0 chr20 52901131 52901255 -13766750 - MIR SINE MIR -21 241 103 250 238 63 0 chr20 52901414 52901477 -13766528 + MIR SINE MIR 106 172 -90 885 133 0 30 chr20 52902840 52902975 -13765030 + FLAM_C SINE Alu 1 131 -2 237 196 20 0 chr20 52903140 52903191 -13764814 - MIR SINE MIR -38 224 173 555 211 24 0 chr20 52903192 52903315 -13764690 - MIR SINE MIR -46 216 91 456 306 191 12 chr20 52903330 52903582 -13764423 - L2 LINE L2 -21 3292 2996 337 333 2 10 chr20 52903899 52904041 -13763964 - MIR SINE MIR -67 141 3 207 264 176 22 chr20 52904656 52904747 -13763258 + MIR SINE MIR 44 148 -114 240 303 303 0 chr20 52905226 52905335 -13762670 + MIR SINE MIR 117 258 -4 1489 153 47 43 chr20 52905379 52905679 -13762326 - AluJb SINE Alu -11 301 1 714 303 197 0 chr20 52905682 52906140 -13761865 - L2 LINE L2 -2 3311 2757 830 154 29 7 chr20 52906279 52906415 -13761590 - AluJo SINE Alu -173 139 1 707 249 18 6 chr20 52906610 52906779 -13761226 - MIR3 SINE MIR -17 191 21 2123 131 0 3 chr20 52907445 52907757 -13760248 - AluSx SINE Alu -1 311 1 2243 112 0 0 chr20 52907766 52908071 -13759934 - AluSx SINE Alu -7 305 1 5517 187 29 30 chr20 52908072 52908203 -13759802 - L1MC3 LINE L1 -9 7776 7646 1377 196 83 11 chr20 52908203 52908468 -13759537 - AluJo SINE Alu -24 288 5 5517 187 29 30 chr20 52908468 52909591 -13758414 - L1MC3 LINE L1 -139 7646 6524 1717 181 0 3 chr20 52909615 52909903 -13758102 - AluJo SINE Alu -20 292 6 653 275 18 40 chr20 52909946 52910168 -13757837 - MIR SINE MIR -4 258 42 357 333 20 0 chr20 52910870 52911023 -13756982 + Charlie8 DNA MER1_type 36 191 -2226 467 304 48 26 chr20 52911072 52911299 -13756706 + MIR SINE MIR 25 256 -6 882 249 247 11 chr20 52911515 52911880 -13756125 - L2 LINE L2 0 3313 2863 270 73 0 0 chr20 52912234 52912275 -13755730 + (TG)n Simple_repeat Simple_repeat 2 42 0 621 249 113 28 chr20 52912572 52912961 -13755044 + L2 LINE L2 2555 2976 -338 200 243 43 179 chr20 52913078 52913218 -13754787 + L2 LINE L2 3191 3311 -2 318 358 54 0 chr20 52913386 52913534 -13754471 - L1M4c LINE L1 -5273 1111 956 181 183 33 17 chr20 52913541 52913601 -13754404 + CT-rich Low_complexity Low_complexity 2 62 0 627 310 60 21 chr20 52914177 52914461 -13753544 + L2 LINE L2 2862 3156 -116 610 295 113 47 chr20 52914661 52915260 -13752745 + L2 LINE L2 2536 3252 -61 724 76 0 139 chr20 52915685 52915829 -13752176 - L1MB5 LINE L1 -1 6173 6050 447 92 0 0 chr20 52915830 52915895 -13752110 + (TCCCC)n Simple_repeat Simple_repeat 1 65 0 1712 171 20 7 chr20 52915895 52916188 -13751817 - AluJb SINE Alu -15 297 1 1906 159 13 35 chr20 52916188 52916426 -13751579 - L1MB5 LINE L1 -113 6061 5834 2297 91 3 7 chr20 52916426 52916734 -13751271 - AluSx SINE Alu -1 311 5 1906 159 13 35 chr20 52916734 52916891 -13751114 - L1MB5 LINE L1 -340 5834 5675 321 26 0 0 chr20 52916892 52916930 -13751075 + (TG)n Simple_repeat Simple_repeat 2 39 0 2163 113 0 3 chr20 52916943 52917245 -13750760 - AluSx SINE Alu -11 301 1 2059 125 3 0 chr20 52917929 52918233 -13749772 - AluSx SINE Alu -7 305 1 191 289 144 11 chr20 52918234 52918324 -13749681 - MIR SINE MIR -59 149 48 362 315 49 30 chr20 52918433 52918636 -13749369 + MIR SINE MIR 32 238 -24 271 306 69 17 chr20 52919037 52919181 -13748824 - MIR SINE MIR 0 262 111 359 279 195 37 chr20 52919334 52919524 -13748481 + MIR SINE MIR 43 262 0 672 278 98 34 chr20 52919958 52919975 -13748030 - MIR SINE MIR 0 262 248 1801 148 0 32 chr20 52919975 52920286 -13747719 + AluSx SINE Alu 3 303 -9 672 278 98 34 chr20 52920286 52920502 -13747503 - MIR SINE MIR -14 248 14 227 281 50 45 chr20 52920511 52920654 -13747351 - MIR SINE MIR -65 143 30 236 274 123 19 chr20 52920949 52921055 -13746950 - MIR3 SINE MIR -84 124 8 515 231 100 0 chr20 52921158 52921288 -13746717 - MIR SINE MIR -70 192 50 319 294 80 64 chr20 52921652 52921839 -13746166 - MIR SINE MIR -3 259 70 240 310 0 0 chr20 52922041 52922112 -13745893 + MIR SINE MIR 173 243 -19 355 290 149 48 chr20 52922405 52922518 -13745487 - MLT1L LTR MaLR -221 394 294 2321 88 0 7 chr20 52922518 52922824 -13745181 - AluSx SINE Alu -8 304 1 355 290 149 48 chr20 52922824 52922958 -13745047 - MLT1L LTR MaLR -321 294 122 754 295 133 10 chr20 52923347 52923754 -13744251 + L2 LINE L2 2394 2850 -464 234 0 0 0 chr20 52925152 52925178 -13742827 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 390 356 49 41 chr20 52925214 52925481 -13742524 - L2 LINE L2 -90 3182 2914 213 346 8 24 chr20 52925771 52925898 -13742107 - MIR SINE MIR -32 230 106 439 233 42 33 chr20 52926431 52926551 -13741454 - L2 LINE L2 -7 3306 3186 992 328 108 1 chr20 52926757 52927436 -13740569 - L2 LINE L2 -6 3307 2546 381 257 9 0 chr20 52927996 52928101 -13739904 + MER117 DNA MER1_type 57 162 -35 1494 174 0 32 chr20 52928222 52928504 -13739501 + AluJo SINE Alu 40 312 0 243 268 18 0 chr20 52928518 52928574 -13739431 + MIR SINE MIR 117 173 -89 223 256 56 33 chr20 52928596 52928686 -13739319 - MIR SINE MIR -80 128 37 210 118 0 0 chr20 52929017 52929051 -13738954 + (TCC)n Simple_repeat Simple_repeat 2 35 0 361 275 42 85 chr20 52929262 52929451 -13738554 - MIR SINE MIR -2 260 80 557 195 172 0 chr20 52929718 52929892 -13738113 + LTR16C LTR ERVL 288 491 0 440 239 65 36 chr20 52929897 52930035 -13737970 + MIR SINE MIR 5 146 -116 847 281 188 16 chr20 52930538 52931362 -13736643 + L2 LINE L2 2342 3310 -3 625 258 146 26 chr20 52931896 52932407 -13735598 + L2 LINE L2 2459 3060 -253 288 324 78 8 chr20 52932506 52932693 -13735312 - MIR SINE MIR -33 229 20 676 168 0 0 chr20 52933102 52933215 -13734790 + MIR SINE MIR 53 165 -97 1858 155 0 16 chr20 52933216 52933532 -13734473 + AluJo SINE Alu 1 311 -1 571 309 76 38 chr20 52933680 52933971 -13734034 + L2 LINE L2 3012 3313 0 396 260 21 0 chr20 52934110 52934206 -13733799 - MIR SINE MIR -63 145 48 314 207 23 23 chr20 52934352 52934439 -13733566 + (TCTCTG)n Simple_repeat Simple_repeat 2 88 0 402 274 152 25 chr20 52934637 52934841 -13733164 + MIR SINE MIR 21 250 -12 306 303 92 0 chr20 52934928 52934978 -13733027 - MIR SINE MIR -15 247 203 1168 212 9 0 chr20 52934978 52935200 -13732805 + MER58A DNA MER1_type 1 224 0 306 303 92 0 chr20 52935200 52935268 -13732737 - MIR SINE MIR -59 203 118 344 331 131 6 chr20 52936108 52936268 -13731737 + MIR SINE MIR 62 241 -21 1340 272 98 35 chr20 52936395 52937254 -13730751 + L2 LINE L2 2214 3129 -184 214 289 26 44 chr20 52937482 52937596 -13730409 - MIR3 SINE MIR -39 169 58 486 232 32 0 chr20 52937931 52938056 -13729949 + MIR SINE MIR 59 187 -75 * 527 282 171 26 chr20 52938055 52938399 -13729606 + L2 LINE L2 2865 3258 -14 312 27 0 0 chr20 52938401 52938438 -13729567 + (TGAA)n Simple_repeat Simple_repeat 2 38 0 249 337 24 0 chr20 52938757 52938840 -13729165 - MIR3 SINE MIR -37 171 87 482 290 83 0 chr20 52938957 52939102 -13728903 + MIR SINE MIR 26 182 -80 402 193 90 90 chr20 52939825 52939970 -13728035 - Charlie8 DNA MER1_type -2257 160 16 358 306 41 20 chr20 52940478 52940674 -13727331 + LTR67 LTR ERVL 123 322 -235 2332 73 0 13 chr20 52940963 52941265 -13726740 - AluY SINE Alu -13 298 1 392 315 86 74 chr20 52941828 52942234 -13725771 - L2 LINE L2 -15 3298 2888 871 200 19 42 chr20 52942260 52942475 -13725530 - MER20 DNA MER1_type -3 216 7 320 266 172 47 chr20 52942482 52942651 -13725354 - L2 LINE L2 -642 2672 2483 897 159 0 0 chr20 52942980 52943112 -13724893 + FLAM_C SINE Alu 2 133 0 22 35 0 0 chr20 52943112 52943141 -13724864 + AT_rich Low_complexity Low_complexity 1 29 0 343 196 115 81 chr20 52943234 52943331 -13724674 - Charlie8 DNA MER1_type -2185 232 127 1221 83 193 5 chr20 52943331 52943523 -13724482 + MER30 DNA MER1_type 3 230 0 343 196 115 81 chr20 52943523 52943573 -13724432 - Charlie8 DNA MER1_type -2290 127 80 30 69 0 0 chr20 52944143 52944201 -13723804 + AT_rich Low_complexity Low_complexity 1 58 0 1978 134 17 3 chr20 52944246 52944544 -13723461 - AluSx SINE Alu -10 302 1 561 225 78 6 chr20 52945334 52945496 -13722509 - MIR SINE MIR -65 143 20 521 245 26 33 chr20 52945540 52945691 -13722314 - MIR SINE MIR -104 158 9 349 387 91 17 chr20 52945613 52945843 -13722162 + MIR SINE MIR 5 251 -11 * 252 351 0 0 chr20 52945873 52945950 -13722055 + MIR SINE MIR 178 254 -8 304 239 88 35 chr20 52946157 52946270 -13721735 + MIR SINE MIR 22 140 -68 294 309 128 7 chr20 52946801 52946950 -13721055 - MIR SINE MIR -19 243 77 313 285 271 0 chr20 52946970 52947114 -13720891 - MIR SINE MIR -65 197 15 371 378 50 21 chr20 52947160 52947401 -13720604 + MIR SINE MIR 15 262 0 683 255 187 38 chr20 52947638 52948081 -13719924 - L2 LINE L2 -1 3312 2804 191 252 178 44 chr20 52948364 52948499 -13719506 - L2 LINE L2 -223 3049 2897 449 231 12 10 chr20 52948717 52948846 -13719159 + MIR SINE MIR 10 140 -68 407 233 97 0 chr20 52948900 52949003 -13719002 - L2 LINE L2 0 3313 3201 781 222 130 9 chr20 52949018 52949234 -13718771 + MIR SINE MIR 4 245 -17 193 204 61 41 chr20 52949322 52949371 -13718634 + L2 LINE L2 3208 3257 -15 375 271 64 27 chr20 52950252 52950440 -13717565 - L2 LINE L2 -250 3063 2869 326 282 89 24 chr20 52950842 52950966 -13717039 - MIR SINE MIR -61 147 16 210 228 76 87 chr20 52951107 52951199 -13716806 + L3 LINE CR1 1431 1521 -56 329 304 122 28 chr20 52951291 52951538 -13716467 + L2 LINE L2 2681 2950 -364 439 236 91 43 chr20 52951568 52951735 -13716270 - MIR SINE MIR -65 143 16 221 316 20 20 chr20 52951717 52951815 -13716190 + L2 LINE L2 2962 3059 -213 * 907 270 18 54 chr20 52951910 52952243 -13715762 - L1ME1 LINE L1 -5 6161 5841 468 265 68 0 chr20 52952276 52952393 -13715612 + L2 LINE L2 3138 3262 -10 194 271 74 49 chr20 52953119 52953221 -13714784 - MIR SINE MIR -63 145 48 297 246 0 0 chr20 52953254 52953315 -13714690 - L2 LINE L2 -3 3310 3250 2135 83 3 3 chr20 52953336 52953626 -13714379 + AluSc SINE Alu 1 290 -19 365 315 6 55 chr20 52954012 52954193 -13713812 + L2 LINE L2 3006 3177 -95 250 333 10 0 chr20 52954232 52954334 -13713671 + (TGGA)n Simple_repeat Simple_repeat 2 104 0 295 261 6 6 chr20 52954350 52954507 -13713498 + (TGAA)n Simple_repeat Simple_repeat 4 160 0 210 274 0 0 chr20 52954581 52954683 -13713322 + (TAAA)n Simple_repeat Simple_repeat 4 105 0 696 243 2 12 chr20 52954683 52955285 -13712720 + (TGGA)n Simple_repeat Simple_repeat 1 595 0 749 299 50 12 chr20 52955713 52955954 -13712051 + MIR SINE MIR 13 262 0 226 303 0 56 chr20 52956581 52956670 -13711335 + LTR33A LTR ERVL 415 498 -25 350 284 108 71 chr20 52956747 52956917 -13711088 - L2 LINE L2 -165 3107 2922 2282 100 0 3 chr20 52956917 52957226 -13710779 + AluSx SINE Alu 1 308 -4 350 284 108 71 chr20 52957226 52957323 -13710682 - L2 LINE L2 -350 2922 2830 357 396 41 16 chr20 52957405 52957842 -13710163 - L2 LINE L2 -620 2694 2247 208 337 61 0 chr20 52958066 52958164 -13709841 + MIR SINE MIR 46 149 -113 616 299 87 45 chr20 52958583 52958871 -13709134 + MER102b DNA MER1_type 1 300 -41 314 111 0 19 chr20 52959452 52959506 -13708499 + MIR SINE MIR 75 127 -81 231 267 209 0 chr20 52959596 52959682 -13708323 + MIR SINE MIR 2 105 -157 1180 249 74 13 chr20 52959736 52960389 -13707616 - L2 LINE L2 0 3313 2608 307 241 149 18 chr20 52960402 52960634 -13707371 + L2 LINE L2 2715 2981 -291 379 218 44 10 chr20 52960786 52960933 -13707072 + MIR SINE MIR 22 179 -59 672 217 38 0 chr20 52961139 52961296 -13706709 + MIR SINE MIR 8 170 -92 252 0 0 0 chr20 52961381 52961409 -13706596 + (TTA)n Simple_repeat Simple_repeat 3 30 0 493 264 69 7 chr20 52961414 52961558 -13706447 + MIR SINE MIR 67 219 -43 2084 96 0 3 chr20 52961576 52961878 -13706127 - AluSx SINE Alu 0 301 1 298 243 5 0 chr20 52962184 52962268 -13705737 + MIR SINE MIR 79 145 -63 489 261 112 17 chr20 52962950 52963160 -13704845 + MIR SINE MIR 36 262 0 964 218 155 51 chr20 52963302 52963734 -13704271 - L2 LINE L2 -10 3303 2827 309 169 0 0 chr20 52964205 52964264 -13703741 + (TG)n Simple_repeat Simple_repeat 1 59 0 1532 201 28 9 chr20 52964716 52965034 -13702971 + MSTD LTR MaLR 73 396 0 242 264 43 13 chr20 52965034 52965140 -13702865 - MIR SINE MIR -66 142 37 385 234 43 0 chr20 52965713 52965807 -13702198 + MIR SINE MIR 80 177 -85 962 256 200 3 chr20 52965844 52966204 -13701801 + L2 LINE L2 2871 3301 -12 256 288 51 34 chr20 52966223 52966341 -13701664 + MIR3 SINE MIR 56 175 -33 275 269 0 0 chr20 52966908 52966975 -13701030 - MIR SINE MIR -59 149 83 645 286 113 24 chr20 52967030 52967508 -13700497 + MLT1K LTR MaLR 28 584 -4 208 288 81 18 chr20 52967606 52967717 -13700288 - L2 LINE L2 -235 3037 2920 734 287 43 12 chr20 52967927 52968181 -13699824 - MER113 DNA MER1_type? -20 501 240 374 292 62 0 chr20 52968240 52968384 -13699621 - L1ME3A LINE L1 -95 6075 5923 3010 208 4 46 chr20 52968384 52969200 -13698805 - L1ME1 LINE L1 -198 5968 5189 801 223 4 36 chr20 52969203 52969454 -13698551 - MER113 DNA MER1_type? -270 251 9 347 276 11 0 chr20 52969462 52969549 -13698456 - L2 LINE L2 0 3313 3226 727 296 113 29 chr20 52970077 52970300 -13697705 + L2 LINE L2 2826 3029 -284 1801 143 6 47 chr20 52970300 52970622 -13697383 - AluJo SINE Alu -1 311 3 727 296 113 29 chr20 52970622 52970848 -13697157 + L2 LINE L2 3029 3313 0 1009 261 135 34 chr20 52971374 52971811 -13696194 - LTR16C LTR ERVL 0 491 11 181 211 175 0 chr20 52972149 52972206 -13695799 + MIR SINE MIR 81 147 -115 404 291 31 0 chr20 52972212 52972397 -13695608 + L1MC/D LINE L1 4646 4835 -1311 969 260 46 0 chr20 52972664 52972945 -13695060 - MER113 DNA MER1_type? -110 411 118 1513 165 70 22 chr20 52972947 52973010 -13694995 + L1MB5 LINE L1 5836 5895 -279 1999 140 3 0 chr20 52973010 52973318 -13694687 - AluJb SINE Alu -3 309 1 1513 165 70 22 chr20 52973318 52973570 -13694435 + L1MB5 LINE L1 5895 6166 -8 265 271 112 0 chr20 52973894 52974001 -13694004 + L2 LINE L2 2956 3074 -198 392 275 105 53 chr20 52974025 52974196 -13693809 + MIR SINE MIR 47 226 -36 940 276 81 9 chr20 52974387 52974875 -13693130 + L2 LINE L2 2539 3051 -262 684 216 149 0 chr20 52975563 52975757 -13692248 - MIR SINE MIR -24 238 16 419 260 47 20 chr20 52976099 52976281 -13691724 - MIR SINE MIR -52 156 16 291 259 0 17 chr20 52976404 52976645 -13691360 + (TCCA)n Simple_repeat Simple_repeat 1 237 0 564 220 0 0 chr20 52976656 52976815 -13691190 + (TCCA)n Simple_repeat Simple_repeat 4 162 0 350 380 135 0 chr20 52977133 52977333 -13690672 - MIR SINE MIR 0 262 36 517 224 150 7 chr20 52977350 52977497 -13690508 - MIR SINE MIR 0 262 95 1210 217 5 0 chr20 52977701 52977922 -13690083 - MER58A DNA MER1_type -2 222 1 863 308 46 10 chr20 52978501 52979001 -13689004 + L1MC/D LINE L1 5191 5704 -417 454 229 17 97 chr20 52979036 52979211 -13688794 + LTR67 LTR ERVL 38 198 -359 284 234 85 11 chr20 52979219 52979313 -13688692 + LTR67 LTR ERVL 355 455 -102 2605 253 58 27 chr20 52979335 52980182 -13687823 - L1ME3A LINE L1 0 6170 5298 1576 190 61 53 chr20 52980228 52980517 -13687488 - MLT2C1 LTR ERVL 0 397 112 1958 141 3 6 chr20 52980517 52980830 -13687175 - AluSx SINE Alu 0 312 1 2168 107 3 16 chr20 52980837 52981146 -13686859 - AluSg SINE Alu -4 306 2 1576 190 61 53 chr20 52981146 52981242 -13686763 - MLT2C1 LTR ERVL -290 107 1 27 33 0 50 chr20 52981467 52981527 -13686478 + AT_rich Low_complexity Low_complexity 1 57 0 745 289 71 66 chr20 52981573 52981942 -13686063 - L2 LINE L2 -2 3311 2938 2594 103 3 14 chr20 52981942 52982310 -13685695 - THE1B LTR MaLR 0 364 1 745 289 71 66 chr20 52982310 52982393 -13685612 - L2 LINE L2 -375 2938 2857 436 282 81 0 chr20 52982723 52982847 -13685158 - MIR SINE MIR -33 229 96 1783 144 0 51 chr20 52982862 52983175 -13684830 - AluJb SINE Alu -15 297 1 190 365 47 19 chr20 52983253 52983360 -13684645 - MIR3 SINE MIR -17 191 82 744 268 245 15 chr20 52983383 52983779 -13684226 + L2 LINE L2 2827 3313 0 207 204 0 0 chr20 52983779 52983828 -13684177 + (TGGA)n Simple_repeat Simple_repeat 2 50 0 1140 158 0 3 chr20 52983854 52984219 -13683786 + (TGGA)n Simple_repeat Simple_repeat 1 363 0 317 230 10 0 chr20 52984230 52984330 -13683675 + (TGGA)n Simple_repeat Simple_repeat 4 104 0 384 333 40 13 chr20 52984865 52985015 -13682990 - MIR SINE MIR -73 189 36 377 247 0 11 chr20 52985077 52985166 -13682839 + MIR SINE MIR 66 153 -55 1144 279 28 16 chr20 52986014 52986337 -13681668 - LTR16C LTR ERVL -10 481 155 321 253 55 11 chr20 52986466 52986557 -13681448 + L2 LINE L2 2976 3070 -202 260 311 19 28 chr20 52986874 52986980 -13681025 - MER5B DNA MER1_type -1 177 73 375 293 73 0 chr20 52987302 52987425 -13680580 + MER5B DNA MER1_type 2 133 -45 600 231 115 0 chr20 52987536 52987692 -13680313 - MIR SINE MIR -28 234 61 22 0 0 0 chr20 52987843 52987865 -13680140 + AT_rich Low_complexity Low_complexity 1 22 0 371 274 48 3 chr20 52988202 52988327 -13679678 + MIR3 SINE MIR 36 167 -41 1949 155 0 0 chr20 52988344 52988648 -13679357 + AluSx SINE Alu 2 305 -7 243 0 0 0 chr20 52988648 52988687 -13679318 + (CA)n Simple_repeat Simple_repeat 1 66 0 243 0 0 0 chr20 52988687 52988714 -13679291 + (CA)n Simple_repeat Simple_repeat 2 28 0 927 262 59 31 chr20 52988874 52989225 -13678780 - MLT1J1 LTR MaLR -103 343 1 1670 151 25 7 chr20 52989234 52989551 -13678454 - AluSx SINE Alu 0 322 1 623 110 0 0 chr20 52989558 52989640 -13678365 - tRNA-Leu-CTT tRNA tRNA -3 82 1 4166 198 55 20 chr20 52989741 52991236 -13676769 + L1MD1 LINE L1 4706 6242 0 346 355 13 7 chr20 52991388 52991540 -13676465 + MIR SINE MIR 98 250 -12 537 339 59 27 chr20 52991870 52992091 -13675914 - MIR SINE MIR -6 256 29 574 248 0 7 chr20 52993390 52993527 -13674478 + MIR SINE MIR 20 155 -107 929 267 67 39 chr20 52993528 52993670 -13674335 + L2 LINE L2 2709 2846 -467 1992 139 0 13 chr20 52993670 52993979 -13674026 - AluJb SINE Alu -7 305 1 929 267 67 39 chr20 52993979 52994415 -13673590 + L2 LINE L2 2846 3313 0 188 252 117 39 chr20 52994562 52994665 -13673340 - MIR SINE MIR -65 143 33 212 119 0 48 chr20 52995285 52995327 -13672678 + (GGCTG)n Simple_repeat Simple_repeat 4 43 0 852 260 29 45 chr20 52995533 52995841 -13672164 + MER102b DNA MER1_type 17 319 -22 196 258 32 0 chr20 52995842 52995904 -13672101 - L2 LINE L2 -268 3004 2941 249 287 154 56 chr20 52995929 52996014 -13671991 - L2 LINE L2 -4 3309 3234 1036 220 9 18 chr20 52996014 52996232 -13671773 + MER20 DNA MER1_type 4 219 0 249 287 154 56 chr20 52996232 52996341 -13671664 - L2 LINE L2 -79 3234 3096 526 292 43 26 chr20 52996798 52997240 -13670765 - MIR SINE MIR -1 261 1 233 321 23 8 chr20 52998018 52998149 -13669856 - L2 LINE L2 -330 2983 2851 327 279 41 27 chr20 52998371 52998518 -13669487 - MIR3 SINE MIR -56 152 4 622 212 63 2 chr20 52998574 52998723 -13669282 + MIR SINE MIR 16 172 -36 450 257 153 11 chr20 52998757 52998940 -13669065 + L2 LINE L2 3100 3308 -5 204 162 0 0 chr20 52999918 52999955 -13668050 - MIR SINE MIR -8 254 218 1024 260 163 22 chr20 53000575 53001067 -13666938 + MLT1K LTR MaLR 26 586 -2 1072 193 14 24 chr20 53001495 53001708 -13666297 - MER20 DNA MER1_type -2 217 7 259 254 0 0 chr20 53001711 53001770 -13666235 + L2 LINE L2 3238 3296 -17 302 287 0 11 chr20 53001839 53001926 -13666079 - LTR67 LTR ERVL -37 520 435 608 228 37 108 chr20 53002016 53002284 -13665721 + MLT1L LTR MaLR 32 280 -335 888 35 18 0 chr20 53002358 53002472 -13665533 - AluSp/q SINE Alu 0 313 198 2339 87 0 0 chr20 53002630 53002928 -13665077 - AluSq SINE Alu -15 298 1 383 251 229 0 chr20 53003424 53003603 -13664402 - MIR SINE MIR 0 262 43 1912 93 10 45 chr20 53003723 53004013 -13663992 + AluSq SINE Alu 31 310 -3 321 343 37 0 chr20 53004028 53004162 -13663843 - L2 LINE L2 0 3313 3175 747 192 8 0 chr20 53004388 53004518 -13663487 + FLAM_C SINE Alu 2 132 -1 267 294 103 37 chr20 53004545 53004681 -13663324 + MIR SINE MIR 39 183 -79 595 154 0 0 chr20 53004683 53004774 -13663231 + Tigger4(Zombi) DNA MER2_type 1 91 -2640 * 2882 154 8 10 chr20 53004769 53005274 -13662731 + Tigger4(Zombi) DNA MER2_type 2218 2721 -10 392 215 278 21 chr20 53005475 53005619 -13662386 - Charlie8 DNA MER1_type -2143 274 94 1911 109 35 39 chr20 53005619 53005930 -13662075 + AluSx SINE Alu 1 310 -2 3711 201 18 7 chr20 53005979 53006704 -13661301 + L1MB7 LINE L1 5443 6175 -9 196 328 0 0 chr20 53007160 53007221 -13660784 - L2 LINE L2 -5 3267 3207 699 253 108 23 chr20 53007279 53007738 -13660267 - L2 LINE L2 -259 3054 2547 192 77 0 0 chr20 53007818 53007844 -13660161 + (CA)n Simple_repeat Simple_repeat 2 27 0 250 242 16 74 chr20 53007876 53008066 -13659939 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 411 259 91 21 chr20 53008295 53008438 -13659567 + MIR SINE MIR 56 208 -54 867 274 99 97 chr20 53008747 53009313 -13658692 - MLT1K LTR MaLR 0 588 22 307 133 47 38 chr20 53009543 53009633 -13658372 + MIR SINE MIR 98 196 -12 573 215 25 32 chr20 53009663 53009821 -13658184 - MIR SINE MIR -59 203 47 297 282 0 13 chr20 53009984 53010062 -13657943 - L2 LINE L2 -1 3312 3236 348 248 8 32 chr20 53010087 53010212 -13657793 - L2 LINE L2 -266 3047 2926 256 290 14 0 chr20 53010262 53010331 -13657674 - MIR SINE MIR -79 129 60 238 300 0 0 chr20 53010893 53010953 -13657052 - MIR SINE MIR -116 146 87 342 299 43 55 chr20 53011209 53011373 -13656632 - MIR SINE MIR 0 262 101 369 317 180 7 chr20 53011855 53012155 -13655850 + L2 LINE L2 2623 2974 -340 686 225 152 5 chr20 53012372 53012563 -13655442 - MER20 DNA MER1_type 0 219 1 359 287 45 124 chr20 53012568 53012923 -13655082 + L2 LINE L2 2931 3257 -15 328 285 177 42 chr20 53012955 53013225 -13654780 - L2 LINE L2 -2 3270 3038 537 175 0 10 chr20 53013225 53013322 -13654683 + L1MB5 LINE L1 6079 6174 0 328 285 177 42 chr20 53013322 53013742 -13654263 - L2 LINE L2 -234 3038 2458 197 246 43 0 chr20 53013884 53013953 -13654052 + MIR SINE MIR 57 128 -80 374 226 29 10 chr20 53014275 53014377 -13653628 + MIR SINE MIR 16 119 -143 1784 220 43 32 chr20 53015192 53015614 -13652391 - Charlie1 DNA MER1_type -23 2738 2307 2073 113 0 0 chr20 53015614 53015898 -13652107 - AluSx SINE Alu -28 284 1 1784 220 43 32 chr20 53015898 53016007 -13651998 - Charlie1 DNA MER1_type -454 2307 2201 469 158 307 0 chr20 53015993 53016107 -13651898 - Charlie1 DNA MER1_type -2612 149 1 * 1985 25 0 0 chr20 53016110 53016351 -13651654 - L1PA4 LINE L1 -310 5845 5605 2705 38 3 0 chr20 53016351 53016663 -13651342 + L1PA4 LINE L1 5836 6155 0 495 265 52 0 chr20 53016751 53016887 -13651118 + MIR SINE MIR 41 183 -79 477 269 28 0 chr20 53016931 53017076 -13650929 + L2 LINE L2 2914 3062 -210 229 343 45 37 chr20 53017666 53017800 -13650205 + L2 LINE L2 3179 3313 0 356 279 39 23 chr20 53017838 53017967 -13650038 - MLT1K LTR MaLR 0 588 458 243 0 0 0 chr20 53018022 53018049 -13649956 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 511 281 87 99 chr20 53018614 53018688 -13649317 - L1ME4a LINE L1 0 6121 6048 1396 161 5 5 chr20 53018688 53018906 -13649099 + MER20 DNA MER1_type 2 219 0 511 281 87 99 chr20 53018906 53019095 -13648910 - L1ME4a LINE L1 -73 6048 5858 2202 103 0 0 chr20 53019095 53019395 -13648610 - AluSg SINE Alu -10 300 1 511 281 87 99 chr20 53019395 53019881 -13648124 - L1ME4a LINE L1 -263 5858 5379 1512 153 137 4 chr20 53019882 53020144 -13647861 - AluJo SINE Alu -2 300 4 350 102 34 0 chr20 53020259 53020318 -13647687 + CT-rich Low_complexity Low_complexity 3 63 0 559 282 25 0 chr20 53020858 53021021 -13646984 + MIR SINE MIR 46 212 -50 981 312 90 17 chr20 53021109 53021574 -13646431 - MLT1L LTR MaLR -116 499 1 313 304 24 16 chr20 53021692 53021817 -13646188 + L2 LINE L2 2263 2388 -926 450 259 169 39 chr20 53022022 53022277 -13645728 + L2 LINE L2 3026 3313 0 336 380 45 10 chr20 53022278 53022570 -13645435 + L2 LINE L2 2665 2966 -348 938 313 72 17 chr20 53022656 53023001 -13645004 - MLT1J LTR MaLR -147 364 1 292 294 20 49 chr20 53023033 53023135 -13644870 + L2 LINE L2 3141 3239 -33 442 337 130 11 chr20 53023592 53023939 -13644066 + L2 LINE L2 2916 3303 -10 380 256 11 0 chr20 53024057 53024147 -13643858 - MIR SINE MIR -109 153 63 291 263 0 93 chr20 53024183 53024253 -13643752 + L1ME1 LINE L1 6051 6107 -55 1205 167 43 0 chr20 53024253 53024463 -13643542 + MER20 DNA MER1_type 1 219 0 291 263 0 93 chr20 53024463 53024510 -13643495 + L1ME1 LINE L1 6107 6157 -5 442 268 99 97 chr20 53024548 53024729 -13643276 + L1MC4a LINE L1 5265 5444 -2364 1471 132 5 0 chr20 53024729 53024949 -13643056 + AluJo SINE Alu 13 233 -79 442 268 99 97 chr20 53024949 53025014 -13642991 + L1MC4a LINE L1 5444 5507 -2301 2499 40 3 0 chr20 53025014 53025310 -13642695 + AluY SINE Alu 1 297 -14 442 268 99 97 chr20 53025310 53025637 -13642368 + L1MC4a LINE L1 5507 5840 -1968 341 300 105 26 chr20 53025906 53026096 -13641909 + MLT1J LTR MaLR 287 491 -20 215 226 108 43 chr20 53026831 53026924 -13641081 + MIR SINE MIR 45 143 -65 * 1197 277 137 36 chr20 53026904 53027187 -13640818 - L2 LINE L2 0 3313 3060 2043 115 61 0 chr20 53027187 53027482 -13640523 + AluSq SINE Alu 1 313 0 1197 277 137 36 chr20 53027482 53028184 -13639821 - L2 LINE L2 -253 3060 2204 267 274 16 0 chr20 53028185 53028247 -13639758 + MIR SINE MIR 119 181 -81 451 241 93 48 chr20 53028324 53028511 -13639494 - MIR SINE MIR -61 147 10 745 253 95 5 chr20 53028655 53028876 -13639129 + MIR SINE MIR 2 242 -20 198 366 91 43 chr20 53028959 53029145 -13638860 + MIR SINE MIR 51 245 -17 691 280 169 22 chr20 53029150 53029518 -13638487 + L1ME2 LINE L1 5742 6163 -1 2001 145 0 3 chr20 53029518 53029829 -13638176 - AluJb SINE Alu -2 310 1 390 255 132 51 chr20 53030018 53030190 -13637815 + MIR SINE MIR 3 185 -62 209 162 0 118 chr20 53030247 53030315 -13637690 + A-rich Low_complexity Low_complexity 3 62 0 434 291 57 0 chr20 53030379 53030520 -13637485 + MIR SINE MIR 86 234 -28 259 331 13 7 chr20 53031134 53031285 -13636720 + (TG)n Simple_repeat Simple_repeat 1 152 0 192 77 0 0 chr20 53031456 53031482 -13636523 + (TG)n Simple_repeat Simple_repeat 2 27 0 2131 91 0 26 chr20 53031522 53031829 -13636176 - AluSx SINE Alu -13 299 1 198 0 0 0 chr20 53032194 53032216 -13635789 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 1076 289 43 31 chr20 53032218 53032633 -13635372 - L2 LINE L2 -16 3297 2878 254 228 0 18 chr20 53033583 53033640 -13634365 + MIR SINE MIR 26 81 -181 204 40 0 0 chr20 53033641 53033666 -13634339 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 506 296 142 8 chr20 53033670 53033917 -13634088 - L2 LINE L2 -22 3291 3012 506 253 80 0 chr20 53033959 53034109 -13633896 + MER96 DNA MER1_type? 14 175 0 293 282 122 6 chr20 53034113 53034294 -13633711 - L2 LINE L2 -337 2977 2776 223 284 27 14 chr20 53034426 53034500 -13633505 + MIR SINE MIR 95 169 -93 255 257 43 0 chr20 53034519 53034589 -13633416 - MIR SINE MIR -103 105 33 546 119 0 0 chr20 53034853 53034937 -13633068 + (GGAA)n Simple_repeat Simple_repeat 4 87 0 401 311 52 40 chr20 53034948 53035196 -13632809 + L1MC4a LINE L1 5665 5915 -1893 897 89 0 0 chr20 53035199 53035345 -13632660 + (TG)n Simple_repeat Simple_repeat 2 147 0 222 286 0 0 chr20 53035807 53035863 -13632142 - MIR3 SINE MIR -48 160 105 * 232 308 125 10 chr20 53035861 53035965 -13632040 + MIR SINE MIR 19 134 -74 639 284 36 92 chr20 53036401 53036474 -13631531 - MLT1J LTR MaLR -92 419 343 2030 120 0 0 chr20 53036474 53036781 -13631224 - AluSx SINE Alu 0 307 1 639 284 36 92 chr20 53036781 53037150 -13630855 - MLT1J LTR MaLR -168 343 1 364 301 22 37 chr20 53037150 53037286 -13630719 - MLT1L LTR MaLR -109 506 373 670 253 21 92 chr20 53037617 53037748 -13630257 - MLT1H LTR MaLR -223 326 224 2055 112 7 20 chr20 53037748 53037916 -13630089 - AluSg SINE Alu -11 299 135 2070 93 0 14 chr20 53037916 53038328 -13629677 - AluSg SINE Alu 0 310 1 2055 112 7 20 chr20 53038328 53038462 -13629543 - AluSg SINE Alu -175 135 1 670 253 21 92 chr20 53038462 53038611 -13629394 - MLT1H LTR MaLR -325 224 66 404 353 109 24 chr20 53038618 53039029 -13628976 + L2 LINE L2 2015 2460 -854 184 396 0 0 chr20 53039074 53039165 -13628840 - MIR SINE MIR -2 260 170 281 267 179 44 chr20 53039390 53039641 -13628364 - L2 LINE L2 -1 3312 3028 568 253 33 33 chr20 53039732 53039914 -13628091 - L2 LINE L2 -518 2796 2615 201 119 48 0 chr20 53040694 53040736 -13627269 + (TAA)n Simple_repeat Simple_repeat 3 46 0 199 260 0 0 chr20 53040815 53040865 -13627140 - MIR SINE MIR -96 166 117 200 122 0 24 chr20 53040937 53040978 -13627027 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 437 302 133 25 chr20 53041069 53041347 -13626658 + L2 LINE L2 2990 3297 -16 1752 164 6 22 chr20 53041398 53041709 -13626296 + AluJb SINE Alu 3 308 -4 246 315 63 9 chr20 53042037 53042148 -13625857 + Charlie8 DNA MER1_type 21 137 -2280 374 253 235 1 chr20 53042453 53042608 -13625397 + Charlie8 DNA MER1_type 94 265 -2152 852 165 0 0 chr20 53042821 53042954 -13625051 + FLAM_C SINE Alu 1 133 0 323 337 47 17 chr20 53042993 53043165 -13624840 + MIR SINE MIR 82 258 -4 201 179 26 0 chr20 53043212 53043251 -13624754 + GA-rich Low_complexity Low_complexity 3 42 0 233 359 179 0 chr20 53043833 53043978 -13624027 + MIR SINE MIR 71 241 -21 330 223 195 9 chr20 53044295 53044441 -13623564 + MIR SINE MIR 21 188 -62 180 341 98 0 chr20 53044607 53044689 -13623316 + L2 LINE L2 3205 3294 -19 229 253 0 88 chr20 53044728 53044819 -13623186 - MIR SINE MIR -77 131 49 410 268 21 35 chr20 53045102 53045244 -13622761 + Charlie8 DNA MER1_type 39 178 -2239 1208 210 51 12 chr20 53045495 53045935 -13622070 + MLT1D LTR MaLR 5 498 -7 294 303 56 34 chr20 53045938 53046116 -13621889 + MIR SINE MIR 47 228 -34 517 275 76 80 chr20 53046307 53046377 -13621628 - MIR SINE MIR 0 262 193 1588 158 16 23 chr20 53046377 53046681 -13621324 + AluJo SINE Alu 1 302 -10 1725 182 0 3 chr20 53046688 53046990 -13621015 + AluJo SINE Alu 1 301 -11 517 275 76 80 chr20 53046990 53047173 -13620832 - MIR SINE MIR -75 187 2 2199 90 55 0 chr20 53047446 53047738 -13620267 + AluSx SINE Alu 1 306 -6 547 174 103 32 chr20 53048017 53048172 -13619833 + MIR SINE MIR 63 228 -34 609 249 73 11 chr20 53048823 53049000 -13619005 - MIR SINE MIR -55 207 20 436 361 87 0 chr20 53049562 53049781 -13618224 + MIR SINE MIR 10 247 -15 388 244 38 122 chr20 53049807 53050020 -13617985 - MIR SINE MIR -2 260 66 599 294 111 34 chr20 53050835 53051250 -13616755 + L2 LINE L2 2267 2713 -601 2274 97 10 3 chr20 53051250 53051560 -13616445 + AluSq SINE Alu 1 312 -1 1188 257 52 19 chr20 53051572 53051938 -13616067 + MER63B DNA MER1_type 4 381 -55 237 325 26 17 chr20 53051962 53052079 -13615926 + L2 LINE L2 3145 3262 -10 792 203 52 142 chr20 53052139 53052484 -13615521 + MER102b DNA MER1_type 23 336 -5 214 301 196 6 chr20 53053234 53053397 -13614608 - MIR SINE MIR -20 242 49 183 214 157 0 chr20 53053414 53053484 -13614521 + L2 LINE L2 3168 3248 -24 414 211 211 8 chr20 53053516 53053781 -13614224 + L2 LINE L2 2376 2694 -620 1385 244 39 60 chr20 53053819 53054620 -13613385 - L2 LINE L2 -65 3248 2469 1794 84 40 7 chr20 53054620 53054894 -13613111 + L1PA10 LINE L1 5881 6163 -5 1385 244 39 60 chr20 53054894 53054961 -13613044 - L2 LINE L2 -844 2469 2402 870 266 31 19 chr20 53055190 53055449 -13612556 - MIR SINE MIR 0 262 1 289 263 114 26 chr20 53055632 53055746 -13612259 - MIR SINE MIR -63 145 22 239 227 55 64 chr20 53056096 53056206 -13611799 + MIR SINE MIR 84 192 -70 339 349 63 7 chr20 53056392 53056582 -13611423 - MIR SINE MIR -28 234 36 712 221 23 128 chr20 53056631 53056765 -13611240 - MIR SINE MIR -14 248 102 1405 144 167 15 chr20 53056765 53057028 -13610977 + AluJo SINE Alu 1 303 -9 2354 111 0 13 chr20 53057034 53057350 -13610655 + AluSx SINE Alu 1 312 0 712 221 23 128 chr20 53057350 53057466 -13610539 - MIR SINE MIR -165 97 18 188 56 83 0 chr20 53058012 53058048 -13609957 + (CAGAGA)n Simple_repeat Simple_repeat 3 41 0 271 89 113 48 chr20 53058084 53058208 -13609797 + (CAGAGA)n Simple_repeat Simple_repeat 4 135 0 660 259 103 0 chr20 53058422 53058646 -13609359 + L2 LINE L2 3024 3270 -2 491 216 29 0 chr20 53058763 53058865 -13609140 + L2 LINE L2 3209 3313 0 213 360 86 0 chr20 53058909 53059048 -13608957 + L2 LINE L2 2708 2858 -456 285 324 124 44 chr20 53059450 53059700 -13608305 + L2 LINE L2 3002 3271 -1 294 259 155 9 chr20 53059744 53059860 -13608145 + L2 LINE L2 3180 3312 -1 413 360 29 0 chr20 53059881 53060017 -13607988 + L2 LINE L2 3133 3272 0 379 206 6 31 chr20 53060017 53060177 -13607828 + (TGGA)n Simple_repeat Simple_repeat 2 157 0 253 330 107 0 chr20 53060573 53060676 -13607329 + MIR SINE MIR 20 133 -129 272 333 49 32 chr20 53060882 53061005 -13607000 + MIR3 SINE MIR 14 138 -70 273 189 25 138 chr20 53061045 53061204 -13606801 - LTR67 LTR ERVL -412 145 5 2057 137 13 0 chr20 53061311 53061610 -13606395 + AluSx SINE Alu 1 303 -9 2257 102 0 3 chr20 53061691 53061984 -13606021 - AluSg SINE Alu -18 292 1 280 261 0 0 chr20 53062068 53062137 -13605868 + (TGAA)n Simple_repeat Simple_repeat 1 69 0 396 135 0 0 chr20 53062172 53062246 -13605759 + (CA)n Simple_repeat Simple_repeat 1 74 0 647 280 25 41 chr20 53062276 53062519 -13605486 - MIR SINE MIR 0 262 24 332 261 22 11 chr20 53062519 53062611 -13605394 - MER5B DNA MER1_type -85 93 1 293 303 65 58 chr20 53062642 53062797 -13605208 + MIR SINE MIR 86 241 -21 834 209 16 6 chr20 53063061 53063243 -13604762 - MER20 DNA MER1_type 0 219 36 343 247 0 0 chr20 53063394 53063487 -13604518 - L1M4 LINE L1 -1888 4258 4166 403 296 89 28 chr20 53063649 53063828 -13604177 - L1ME4a LINE L1 -136 5985 5796 2107 143 3 0 chr20 53063874 53064175 -13603830 + AluSp SINE Alu 1 302 -11 1358 240 163 5 chr20 53064175 53064498 -13603507 + MLT1J LTR MaLR 58 455 -56 2359 94 0 3 chr20 53064498 53064796 -13603209 + AluSg SINE Alu 1 297 -13 1358 240 163 5 chr20 53064796 53064864 -13603141 + MLT1J LTR MaLR 455 511 0 632 281 18 61 chr20 53064915 53064984 -13603021 - L1ME4a LINE L1 -343 5778 5708 2311 121 0 0 chr20 53064984 53065289 -13602716 - AluSx SINE Alu -7 305 1 632 281 18 61 chr20 53065289 53065497 -13602508 - L1ME4a LINE L1 -413 5708 5513 630 274 20 20 chr20 53065646 53065843 -13602162 - LTR67 LTR ERVL -1 556 360 340 286 65 18 chr20 53065919 53066087 -13601918 - LTR67 LTR ERVL -377 180 5 342 240 19 67 chr20 53066391 53066495 -13601510 + L2 LINE L2 3215 3313 0 919 266 42 88 chr20 53066550 53067004 -13601001 - L2 LINE L2 -4 3309 2877 1951 146 0 38 chr20 53067726 53068042 -13599963 - AluJo SINE Alu -8 304 1 333 357 166 0 chr20 53068552 53068751 -13599254 - MIR SINE MIR -16 246 15 401 246 6 0 chr20 53069636 53069807 -13598198 + GA-rich Low_complexity Low_complexity 1 172 0 257 243 89 134 chr20 53069940 53070187 -13597818 + MIR SINE MIR 14 249 -13 735 239 17 6 chr20 53070721 53070897 -13597108 - MIR SINE MIR -25 237 60 1032 227 29 5 chr20 53070994 53071201 -13596804 + MER20 DNA MER1_type 2 213 -6 337 180 0 0 chr20 53071205 53071266 -13596739 - MIR SINE MIR -93 169 109 378 225 0 0 chr20 53071275 53071355 -13596650 - MIR SINE MIR -93 169 90 537 291 144 35 chr20 53071621 53071940 -13596065 - L2 LINE L2 -4 3309 2956 2175 93 0 0 chr20 53071949 53072208 -13595797 + AluSx SINE Alu 7 265 -47 475 213 41 12 chr20 53072263 53072432 -13595573 + GA-rich Low_complexity Low_complexity 3 176 0 2561 68 3 0 chr20 53072434 53072741 -13595264 + AluSg SINE Alu 1 308 -2 740 250 93 0 chr20 53072751 53073019 -13594986 - L2 LINE L2 -341 2973 2681 1892 204 89 40 chr20 53073020 53073491 -13594514 + MLT1D LTR MaLR 3 496 -9 292 268 0 21 chr20 53073501 53073598 -13594407 - L2 LINE L2 -630 2684 2590 440 327 133 0 chr20 53073755 53074033 -13593972 + L2 LINE L2 2998 3312 -1 224 339 40 32 chr20 53074044 53074168 -13593837 - MIR SINE MIR -115 147 23 287 277 25 42 chr20 53074325 53074444 -13593561 - MIR SINE MIR -73 135 19 267 310 20 0 chr20 53074602 53074702 -13593303 + MIR SINE MIR 30 131 -77 2246 132 0 0 chr20 53074774 53075125 -13592880 + AluSx SINE Alu 1 351 0 1004 247 38 66 chr20 53075246 53075638 -13592367 - MLT1J LTR MaLR -60 451 71 408 277 101 64 chr20 53075727 53076068 -13591937 - L2 LINE L2 -252 3061 2706 515 338 74 63 chr20 53076140 53076599 -13591406 - L2 LINE L2 0 3272 2809 2045 135 0 0 chr20 53076615 53076937 -13591068 + AluSx SINE Alu 1 322 0 287 328 51 14 chr20 53077292 53077435 -13590570 - MIR3 SINE MIR -49 159 11 237 321 12 12 chr20 53077443 53077527 -13590478 + GA-rich Low_complexity Low_complexity 3 86 0 262 304 186 34 chr20 53077595 53077799 -13590206 - MIR SINE MIR -14 248 14 975 266 101 53 chr20 53077900 53078367 -13589638 + Charlie8 DNA MER1_type 14 502 -1915 400 83 0 28 chr20 53078392 53078464 -13589541 + MER53 DNA DNA 120 189 0 311 277 213 26 chr20 53078480 53078556 -13589449 + MIR SINE MIR 73 133 -129 1472 157 14 68 chr20 53078556 53078849 -13589156 + AluJo SINE Alu 26 302 -10 311 277 213 26 chr20 53078849 53078927 -13589078 + MIR SINE MIR 133 256 -6 585 243 166 24 chr20 53078929 53079176 -13588829 + MLT1L LTR MaLR 1 282 -333 540 303 0 12 chr20 53079427 53079592 -13588413 + MIR SINE MIR 99 261 -1 681 318 50 7 chr20 53079940 53080223 -13587782 - MLT1L LTR MaLR 0 615 321 2279 83 3 10 chr20 53080256 53080568 -13587437 + AluSx SINE Alu 1 312 0 847 146 0 53 chr20 53080598 53080749 -13587256 - FLAM_C SINE Alu 0 143 1 465 314 111 30 chr20 53080749 53081020 -13586985 - MLT1L LTR MaLR -315 300 8 267 245 142 39 chr20 53081032 53081187 -13586818 + HAL1 LINE L1 40 210 -2297 360 284 163 39 chr20 53081390 53081721 -13586284 + HAL1 LINE L1 518 889 -1618 318 241 0 0 chr20 53081761 53081840 -13586165 + MIR SINE MIR 51 129 -79 321 214 14 0 chr20 53082182 53082252 -13585753 + MIR SINE MIR 73 143 -119 772 237 70 0 chr20 53082254 53082440 -13585565 + MLT1J LTR MaLR 1 199 -312 240 35 0 0 chr20 53082443 53082472 -13585533 + (TTTTA)n Simple_repeat Simple_repeat 4 32 0 2074 128 14 7 chr20 53082482 53082772 -13585233 - AluSc SINE Alu -17 292 1 641 168 92 0 chr20 53082797 53082916 -13585089 - FLAM_C SINE Alu -3 130 1 2074 137 22 6 chr20 53082924 53083237 -13584768 - 7SLRNA srpRNA srpRNA -2 318 1 334 185 62 15 chr20 53083247 53083312 -13584693 + MLT1J LTR MaLR 206 273 -238 231 283 0 54 chr20 53083399 53083491 -13584514 + MIR SINE MIR 176 262 0 267 238 56 56 chr20 53083510 53083636 -13584369 - MIR SINE MIR -76 186 61 554 263 11 59 chr20 53083789 53083855 -13584150 + MER20 DNA MER1_type 1 69 -150 2454 80 10 6 chr20 53083855 53084166 -13583839 - AluSx SINE Alu 0 312 1 554 263 11 59 chr20 53084166 53084285 -13583720 + MER20 DNA MER1_type 69 177 -42 1556 251 48 9 chr20 53085065 53085504 -13582501 + LTR16C LTR ERVL 35 490 -1 2417 108 0 0 chr20 53085688 53085994 -13582011 + AluSx SINE Alu 1 306 -6 2123 90 63 0 chr20 53086001 53086311 -13581694 + AluSx SINE Alu 1 327 0 901 289 128 10 chr20 53086316 53086817 -13581188 + L2 LINE L2 2736 3304 -9 482 291 13 0 chr20 53086885 53087036 -13580969 - L2 LINE L2 -195 3077 2925 267 243 29 0 chr20 53087131 53087201 -13580804 - L2 LINE L2 -65 3207 3136 183 80 0 0 chr20 53087337 53087362 -13580643 + (CA)n Simple_repeat Simple_repeat 2 26 0 342 0 0 0 chr20 53087894 53087932 -13580073 + (TG)n Simple_repeat Simple_repeat 1 38 0 881 80 0 9 chr20 53087934 53088047 -13579958 - AluSq/x SINE Alu -196 116 5 226 169 28 70 chr20 53088134 53088205 -13579800 + MER106A DNA MER1_type 146 213 -23 301 359 35 30 chr20 53088215 53088341 -13579664 - L2 LINE L2 -160 3112 2983 813 177 121 5 chr20 53088341 53088539 -13579466 - MER58A DNA MER1_type -3 221 1 301 359 35 30 chr20 53088539 53088610 -13579395 - L2 LINE L2 -289 2983 2914 473 172 0 23 chr20 53088724 53088811 -13579194 - L2 LINE L2 0 3313 3229 267 176 0 0 chr20 53088882 53088933 -13579072 + MIR SINE MIR 73 123 -139 670 160 83 77 chr20 53089030 53089211 -13578794 + AluSg/x SINE Alu 118 299 -13 181 194 60 30 chr20 53089246 53089313 -13578692 - L2 LINE L2 -219 3094 3026 329 232 0 0 chr20 53089833 53089902 -13578103 + MIR SINE MIR 67 135 -127 281 262 0 0 chr20 53090012 53090073 -13577932 - MIR SINE MIR -26 236 176 497 226 9 0 chr20 53090191 53090297 -13577708 - MIR SINE MIR -140 122 16 392 172 0 111 chr20 53090643 53090742 -13577263 - MIR SINE MIR -87 121 34 333 314 25 8 chr20 53090747 53090865 -13577140 + Charlie8 DNA MER1_type 3 122 -2295 2017 164 39 3 chr20 53090985 53091368 -13576637 + L1MC1 LINE L1 5932 6328 -5 2395 60 0 7 chr20 53091368 53091677 -13576328 + AluY SINE Alu 1 307 0 2853 65 3 23 chr20 53091679 53091974 -13576031 + MER41A LTR ERV1 93 380 -174 2308 101 3 3 chr20 53091974 53092272 -13575733 + AluSp SINE Alu 1 298 -15 2853 65 3 23 chr20 53092272 53092361 -13575644 + MER41A LTR ERV1 380 469 -85 1973 125 38 3 chr20 53092393 53092682 -13575323 + AluSx SINE Alu 1 299 -13 322 320 43 2 chr20 53092689 53092862 -13575143 + Charlie8 DNA MER1_type 138 1415 -1002 1545 230 137 39 chr20 53093369 53093903 -13574102 + MLT1K LTR MaLR 3 588 0 1411 138 0 0 chr20 53093992 53094188 -13573817 + AluSx SINE Alu 1 196 -116 238 306 19 19 chr20 53094197 53094305 -13573700 + MLT1L LTR MaLR 507 614 -1 180 320 214 10 chr20 53094344 53094447 -13573558 - MIR3 SINE MIR -71 137 14 387 332 75 35 chr20 53094978 53095204 -13572801 - MIR SINE MIR -21 241 7 1108 269 105 28 chr20 53095307 53095764 -13572241 - MLT1L LTR MaLR -122 493 2 23 54 0 0 chr20 53095848 53095885 -13572120 + AT_rich Low_complexity Low_complexity 1 37 0 2134 139 7 0 chr20 53095905 53096206 -13571799 + AluSx SINE Alu 1 303 -9 1256 248 40 12 chr20 53096929 53097134 -13570871 - MER58B DNA MER1_type -2085 335 137 2296 123 0 3 chr20 53097134 53097443 -13570562 - AluSx SINE Alu -4 308 1 1982 158 0 3 chr20 53097447 53097744 -13570261 - AluJb SINE Alu -16 296 1 1256 248 40 12 chr20 53097744 53097785 -13570220 - MER58B DNA MER1_type -2285 135 97 2154 130 3 0 chr20 53097785 53098085 -13569920 + AluSq SINE Alu 1 301 -12 1256 248 40 12 chr20 53098085 53098155 -13569850 - MER58B DNA MER1_type -2323 97 4 312 120 0 0 chr20 53098223 53098273 -13569732 + (TG)n Simple_repeat Simple_repeat 2 51 0 1651 177 11 76 chr20 53098274 53098349 -13569656 - MER2 DNA MER2_type 0 344 266 1830 79 135 22 chr20 53098349 53098616 -13569389 + AluSg SINE Alu 2 298 -12 2195 108 14 3 chr20 53098623 53098919 -13569086 + AluSx SINE Alu 1 299 -13 1651 177 11 76 chr20 53098919 53099203 -13568802 - MER2 DNA MER2_type -84 260 1 1876 166 17 26 chr20 53099468 53099621 -13568384 + MER7A DNA MER2_type 1 154 -2884 3805 102 19 6 chr20 53099621 53100141 -13567864 + MER1A DNA MER1_type 1 527 0 1876 166 17 26 chr20 53100141 53100337 -13567668 + MER7A DNA MER2_type 154 345 -1 218 220 198 11 chr20 53100348 53100439 -13567566 - MER91C DNA MER1_type -32 108 1 519 260 29 23 chr20 53100936 53101109 -13566896 + Charlie8 DNA MER1_type 92 265 -2152 1516 229 85 37 chr20 53101165 53101899 -13566106 - L2 LINE L2 -1 3312 2529 2507 86 0 0 chr20 53101910 53102214 -13565791 - AluSp SINE Alu -9 304 1 2198 141 0 0 chr20 53102214 53102520 -13565485 - AluSx SINE Alu -6 306 1 557 264 201 53 chr20 53102555 53102860 -13565145 + L2 LINE L2 2856 3235 -78 1965 137 32 0 chr20 53102860 53103144 -13564861 - AluSx SINE Alu -19 293 1 557 264 201 53 chr20 53103144 53103235 -13564770 + L2 LINE L2 3235 3311 -2 340 250 75 17 chr20 53103254 53103374 -13564631 + MIR SINE MIR 58 184 -78 579 255 130 73 chr20 53103995 53104242 -13563763 - MIR SINE MIR 0 262 2 465 194 194 18 chr20 53104268 53104433 -13563572 - MIR SINE MIR -3 259 66 833 118 110 0 chr20 53104438 53104574 -13563431 - FRAM SINE Alu -5 171 21 1222 124 0 0 chr20 53104679 53104857 -13563148 - L1MB7 LINE L1 -12 6172 5995 921 198 68 81 chr20 53104857 53105180 -13562825 + MLT1G LTR MaLR 254 572 -18 239 278 14 14 chr20 53105195 53105267 -13562738 - MIR SINE MIR -177 85 14 1792 182 0 25 chr20 53105497 53105784 -13562221 + AluJb SINE Alu 1 281 -31 861 73 15 15 chr20 53105784 53105920 -13562085 + (GGAA)n Simple_repeat Simple_repeat 3 138 0 1792 182 0 25 chr20 53105920 53105950 -13562055 + AluJb SINE Alu 281 310 -2 2248 119 6 3 chr20 53106102 53106413 -13561592 - AluSx SINE Alu 0 312 1 881 249 35 11 chr20 53106812 53107073 -13560932 + L1ME3A LINE L1 5869 6135 -35 435 194 0 0 chr20 53107085 53107178 -13560827 + (CA)n Simple_repeat Simple_repeat 2 94 0 590 222 17 0 chr20 53107253 53107370 -13560635 + MIR SINE MIR 17 135 -127 767 260 67 79 chr20 53107383 53107861 -13560144 + L2 LINE L2 2793 3266 -47 2266 129 0 0 chr20 53108206 53108508 -13559497 - AluSx SINE Alu -10 302 1 2200 138 0 0 chr20 53108847 53109152 -13558853 - AluSq SINE Alu -8 305 1 972 141 0 0 chr20 53109153 53109295 -13558710 - FRAM SINE Alu -13 163 22 221 305 105 9 chr20 53110052 53110157 -13557848 - L2 LINE L2 -40 3273 3159 356 273 81 56 chr20 53110404 53110602 -13557403 + L2 LINE L2 2930 3132 -140 664 254 166 0 chr20 53110653 53110834 -13557171 + MIR SINE MIR 48 258 -4 1771 182 16 24 chr20 53110961 53111330 -13556675 - MER47A DNA MER2_type 0 366 1 423 0 0 0 chr20 53111384 53111431 -13556574 + (CA)n Simple_repeat Simple_repeat 2 48 0 2490 48 10 3 chr20 53111957 53112250 -13555755 + AluY SINE Alu 3 297 -14 518 255 9 0 chr20 53112330 53112436 -13555569 - MIR SINE MIR -102 160 54 1692 177 4 0 chr20 53112445 53112710 -13555295 + AluJb SINE Alu 1 266 -46 204 40 0 0 chr20 53112716 53112741 -13555264 + (CA)n Simple_repeat Simple_repeat 2 26 0 1039 135 14 6 chr20 53112830 53113332 -13554673 + (TGGA)n Simple_repeat Simple_repeat 1 506 0 209 276 20 20 chr20 53113335 53113433 -13554572 + (TGAA)n Simple_repeat Simple_repeat 3 100 0 713 262 145 47 chr20 53113500 53113928 -13554077 + Charlie8 DNA MER1_type 2 471 -1946 764 239 6 0 chr20 53113962 53114121 -13553884 + MIR SINE MIR 13 172 -90 838 201 34 0 chr20 53114227 53114406 -13553599 + MER20 DNA MER1_type 1 185 -34 552 288 38 28 chr20 53114834 53115046 -13552959 + MIR SINE MIR 37 250 -12 432 0 0 0 chr20 53115320 53115368 -13552637 + (TG)n Simple_repeat Simple_repeat 1 48 0 1430 171 119 0 chr20 53115388 53115640 -13552365 - AluJb SINE Alu -30 282 1 990 313 66 37 chr20 53115697 53116396 -13551609 + L1MC4a LINE L1 5254 5972 -1836 297 214 0 68 chr20 53116611 53116702 -13551303 + L1ME4a LINE L1 5964 6049 -72 1743 175 3 63 chr20 53116702 53117033 -13550972 - AluJo SINE Alu -1 311 1 297 214 0 68 chr20 53117033 53117044 -13550961 + L1ME4a LINE L1 6049 6059 -62 1026 184 0 0 chr20 53117053 53117216 -13550789 - AluJo SINE Alu -30 282 120 2005 116 0 38 chr20 53117249 53117570 -13550435 + AluSx SINE Alu 1 310 0 352 231 231 21 chr20 53117847 53117990 -13550015 + MIR SINE MIR 47 219 -43 370 336 50 0 chr20 53118217 53118357 -13549648 + MIR SINE MIR 50 196 -66 1007 259 98 15 chr20 53118520 53118856 -13549149 - MER113 DNA MER1_type? -4 517 154 425 254 122 107 chr20 53118922 53119241 -13548764 + MLT1I LTR MaLR 86 409 0 2415 105 0 0 chr20 53119279 53119584 -13548421 + AluSg SINE Alu 1 305 -5 1994 127 3 17 chr20 53119586 53119899 -13548106 + AluSx SINE Alu 1 309 0 718 130 0 0 chr20 53119904 53120004 -13548001 + AluS SINE Alu 2 101 -211 2120 141 0 3 chr20 53120066 53120378 -13547627 - AluSx SINE Alu -1 311 1 678 254 43 38 chr20 53120385 53120516 -13547489 + L2 LINE L2 3104 3238 -75 225 0 0 0 chr20 53120516 53120541 -13547464 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 678 254 43 38 chr20 53120541 53120618 -13547387 + L2 LINE L2 3238 3313 0 2236 115 0 7 chr20 53120703 53121007 -13546998 + AluSx SINE Alu 1 302 -10 478 362 16 0 chr20 53121052 53121237 -13546768 - MLT1K LTR MaLR -399 189 2 659 211 78 12 chr20 53121830 53121996 -13546009 + MLT1J LTR MaLR 2 178 -333 255 225 79 34 chr20 53122016 53122105 -13545900 + MLT1J LTR MaLR 286 378 -133 836 141 35 0 chr20 53122259 53122429 -13545576 + CT-rich Low_complexity Low_complexity 3 178 0 1711 175 16 22 chr20 53122432 53122746 -13545259 - AluJo SINE Alu 0 312 1 950 162 0 0 chr20 53122895 53123037 -13544968 + FLAM_C SINE Alu 1 142 -1 187 304 120 24 chr20 53123077 53123202 -13544803 - MER5B DNA MER1_type -3 175 39 * 823 273 10 1 chr20 53123173 53123392 -13544613 + MIR SINE MIR 43 262 0 235 149 35 149 chr20 53123396 53123427 -13544578 + L1ME LINE L1 5532 5565 -556 1962 158 0 28 chr20 53123427 53123744 -13544261 + AluJo SINE Alu 1 308 -4 235 149 35 149 chr20 53123744 53123799 -13544206 + L1ME LINE L1 5565 5608 -513 251 86 0 0 chr20 53123851 53123886 -13544119 - L2 LINE L2 -3 3310 3276 344 218 69 23 chr20 53123893 53123980 -13544025 - MLT1I LTR MaLR -4 405 315 1233 163 131 145 chr20 53124027 53124555 -13543450 - MER66A LTR ERV1 -10 601 100 485 246 29 7 chr20 53124597 53124735 -13543270 - MLT1J2 LTR MaLR -243 207 67 397 261 9 43 chr20 53124773 53124888 -13543117 - L2 LINE L2 -29 3284 3174 1613 218 11 16 chr20 53124913 53125285 -13542720 - L1MC/D LINE L1 -2124 5684 5315 2403 96 3 0 chr20 53125436 53125737 -13542268 + AluSq SINE Alu 1 302 -11 508 271 0 16 chr20 53125764 53125893 -13542112 - L2 LINE L2 -25 3288 3162 2075 142 3 0 chr20 53125899 53126194 -13541811 + AluJb SINE Alu 1 296 -16 438 246 159 107 chr20 53126195 53126285 -13541720 + L1MC4 LINE L1 5301 5385 -2423 2122 102 35 0 chr20 53126285 53126569 -13541436 + AluSp SINE Alu 1 294 -19 438 246 159 107 chr20 53126569 53126824 -13541181 + L1MC4 LINE L1 5385 5664 -2144 665 290 168 42 chr20 53126944 53127520 -13540485 - L2 LINE L2 -358 2956 2308 2158 114 7 0 chr20 53127618 53127950 -13540055 + AluSx SINE Alu 2 335 0 457 122 40 0 chr20 53127950 53128024 -13539981 + L1ME2 LINE L1 5695 5771 -391 338 243 0 14 chr20 53128044 53128118 -13539887 + L1MC4 LINE L1 6632 6704 -1338 547 188 56 76 chr20 53128213 53128346 -13539659 + L1ME2 LINE L1 5781 5911 -251 2275 89 0 0 chr20 53128346 53128655 -13539350 - AluY SINE Alu 0 309 1 547 188 56 76 chr20 53128655 53128717 -13539288 + L1ME2 LINE L1 5911 5973 -189 1779 119 0 0 chr20 53128943 53129178 -13538827 + AluSx SINE Alu 1 235 -77 1018 85 16 0 chr20 53129884 53130013 -13537992 + FLAM_C SINE Alu 1 131 -2 2326 100 0 0 chr20 53130025 53130314 -13537691 + AluSx SINE Alu 11 299 -13 293 297 43 7 chr20 53130619 53130757 -13537248 + Charlie8 DNA MER1_type 216 358 -2059 225 269 108 23 chr20 53130759 53130889 -13537116 + MLT1J LTR MaLR 1 141 -370 534 180 8 55 chr20 53130982 53131110 -13536895 + MER20 DNA MER1_type 81 202 -17 515 304 79 29 chr20 53131190 53131430 -13536575 + MLT1J LTR MaLR 257 508 -3 285 219 49 12 chr20 53131430 53131505 -13536500 + Charlie8 DNA MER1_type 351 428 -1989 2336 96 3 19 chr20 53131523 53131836 -13536169 + AluSp SINE Alu 5 312 -1 312 137 20 0 chr20 53131872 53131923 -13536082 + Charlie8 DNA MER1_type 1377 1428 -989 4053 127 25 86 chr20 53132098 53132672 -13535333 - LTR1 LTR ERV1 0 785 276 1971 93 37 93 chr20 53132672 53132994 -13535011 - AluSx SINE Alu -8 304 1 4053 127 25 86 chr20 53132994 53133255 -13534750 - LTR1 LTR ERV1 -509 276 1 450 277 8 31 chr20 53133258 53133388 -13534617 + MIR SINE MIR 67 193 -69 2224 117 13 0 chr20 53133858 53134166 -13533839 + AluSx SINE Alu 1 312 0 2317 102 6 22 chr20 53134191 53134506 -13533499 + AluSg SINE Alu 1 310 0 348 218 143 41 chr20 53134677 53134824 -13533181 - LTR33 LTR ERVL -170 351 190 2193 93 4 0 chr20 53135001 53135306 -13532699 - AluSx SINE Alu 0 306 1 709 281 113 0 chr20 53136070 53136291 -13531714 - LTR16C LTR ERVL 0 491 246 2472 121 70 2 chr20 53136294 53136706 -13531299 + LTR47A LTR ERVL 13 452 0 293 146 18 18 chr20 53136709 53136764 -13531241 - LTR16C LTR ERVL -249 242 188 2198 105 44 0 chr20 53136891 53137186 -13530819 + AluSx SINE Alu 1 308 -4 330 285 99 67 chr20 53137187 53137471 -13530534 - LTR16C LTR ERVL -150 341 49 312 309 89 16 chr20 53137633 53137756 -13530249 - MIR SINE MIR -110 152 21 242 284 0 30 chr20 53137759 53137826 -13530179 + CT-rich Low_complexity Low_complexity 2 66 0 298 337 209 6 chr20 53137941 53138104 -13529901 - L2 LINE L2 -1 3271 3076 1332 131 48 0 chr20 53138173 53138379 -13529626 - MER20 DNA MER1_type -3 216 1 318 295 26 0 chr20 53138443 53138554 -13529451 - L2 LINE L2 -237 3035 2922 2182 88 51 3 chr20 53138663 53138958 -13529047 - AluSp SINE Alu -4 309 1 437 211 29 27 chr20 53138975 53139105 -13528900 + L1ME1 LINE L1 5445 5568 -598 740 142 0 0 chr20 53139108 53139345 -13528660 - AluSg/x SINE Alu 0 411 175 284 188 12 118 chr20 53139349 53139434 -13528571 + L1ME1 LINE L1 5554 5629 -537 854 165 0 0 chr20 53139435 53139556 -13528449 + FLAM_C SINE Alu 1 121 -22 279 0 0 0 chr20 53139556 53139587 -13528418 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1767 220 18 78 chr20 53139592 53139803 -13528202 + L1ME1 LINE L1 5625 5847 -319 2149 124 3 0 chr20 53139803 53140094 -13527911 - AluSq SINE Alu -19 294 3 1767 220 18 78 chr20 53140094 53140392 -13527613 + L1ME1 LINE L1 5847 6099 -67 1924 145 30 20 chr20 53140392 53140696 -13527309 + AluJo SINE Alu 1 307 -5 1767 220 18 78 chr20 53140696 53140749 -13527256 + L1ME1 LINE L1 6099 6154 -12 2457 100 0 0 chr20 53140915 53141224 -13526781 + AluSx SINE Alu 3 311 -1 2114 120 0 40 chr20 53141796 53142121 -13525884 + AluSx SINE Alu 1 312 0 490 340 13 0 chr20 53142352 53142511 -13525494 + MIR SINE MIR 61 221 -41 2545 159 24 47 chr20 53142516 53143024 -13524981 - MLT1D LTR MaLR -4 501 6 31 44 0 0 chr20 53143243 53143288 -13524717 + AT_rich Low_complexity Low_complexity 1 45 0 1768 141 133 20 chr20 53143297 53143644 -13524361 + MSTB LTR MaLR 11 396 -30 1848 142 9 44 chr20 53143644 53143960 -13524045 - AluSx SINE Alu -7 305 1 366 78 0 0 chr20 53143960 53144011 -13523994 - AluJb SINE Alu -167 135 85 271 143 20 0 chr20 53143998 53144047 -13523958 + MSTB LTR MaLR 383 432 0 * 443 136 84 155 chr20 53144110 53144158 -13523847 - MLT1F1 LTR MaLR -5 562 512 2552 52 7 3 chr20 53144158 53144463 -13523542 + AluY SINE Alu 1 306 -5 443 136 84 155 chr20 53144463 53144569 -13523436 - MLT1F1 LTR MaLR -55 512 419 441 202 52 59 chr20 53144588 53144751 -13523254 - MLT1H1 LTR MaLR -405 190 18 1566 138 0 0 chr20 53144759 53144983 -13523022 + AluSg/x SINE Alu 82 305 -5 877 197 19 66 chr20 53145382 53145595 -13522410 - MER20 DNA MER1_type 0 219 17 673 287 89 58 chr20 53145600 53145668 -13522337 + MLT1L LTR MaLR 175 239 -376 2004 142 3 32 chr20 53145668 53145978 -13522027 + AluJb SINE Alu 1 301 -11 673 287 89 58 chr20 53145978 53146337 -13521668 + MLT1L LTR MaLR 239 615 0 2447 87 0 3 chr20 53146510 53146822 -13521183 - AluSq SINE Alu -2 311 1 323 273 65 98 chr20 53147154 53147337 -13520668 + MIR SINE MIR 15 203 -59 623 245 101 5 chr20 53147525 53147713 -13520292 - MIR SINE MIR -29 233 28 1320 196 18 61 chr20 53147826 53148152 -13519853 + L1ME3A LINE L1 5854 6165 -5 517 204 9 9 chr20 53148678 53148786 -13519219 - LTR16C LTR ERVL -2 489 382 288 242 61 0 chr20 53148942 53149008 -13518997 - MLT1L LTR MaLR 0 615 546 1934 102 26 4 chr20 53149163 53149429 -13518576 + AluSx SINE Alu 34 305 -7 2493 61 0 13 chr20 53149575 53149886 -13518119 + AluY SINE Alu 1 307 -4 2391 87 3 0 chr20 53149946 53150244 -13517761 + AluSp SINE Alu 1 299 -14 192 40 0 0 chr20 53150625 53150650 -13517355 + (TC)n Simple_repeat Simple_repeat 2 26 0 254 291 0 23 chr20 53150755 53150841 -13517164 - L2 LINE L2 -4 3268 3185 630 258 75 5 chr20 53151160 53151346 -13516659 - MLT1L LTR MaLR 0 615 417 2366 87 0 10 chr20 53151382 53151692 -13516313 - AluY SINE Alu -4 307 1 304 235 52 38 chr20 53151704 53151809 -13516196 - MLT1L LTR MaLR -310 201 116 264 185 0 77 chr20 53151842 53151907 -13516098 - MLT1L LTR MaLR -555 60 1 230 279 25 13 chr20 53152256 53152335 -13515670 - MLT1J LTR MaLR 0 511 432 2137 117 21 0 chr20 53152337 53152628 -13515377 - AluSg SINE Alu -13 297 1 938 245 86 93 chr20 53152714 53152917 -13515088 - MLT1J LTR MaLR -74 437 234 2421 92 0 0 chr20 53152917 53153221 -13514784 + AluSc SINE Alu 1 304 -5 938 245 86 93 chr20 53153221 53153445 -13514560 - MLT1J LTR MaLR -277 234 13 517 251 23 29 chr20 53154231 53154402 -13513603 + MIR SINE MIR 82 251 -11 640 146 73 161 chr20 53154597 53154669 -13513336 - MER45A DNA AcHobo -1403 178 101 2235 112 0 0 chr20 53154669 53154964 -13513041 + AluSx SINE Alu 1 295 -17 640 146 73 161 chr20 53154964 53154980 -13513025 - MER45A DNA AcHobo -1480 101 85 2209 93 0 24 chr20 53154980 53155308 -13512697 + AluSx SINE Alu 1 321 0 640 146 73 161 chr20 53155308 53155409 -13512596 - MER45A DNA AcHobo -1496 85 4 288 270 184 26 chr20 53155537 53155689 -13512316 - MIR SINE MIR -3 259 84 480 233 92 0 chr20 53156249 53156369 -13511636 + MIR SINE MIR 48 178 -84 227 217 0 0 chr20 53156375 53156421 -13511584 + (TTA)n Simple_repeat Simple_repeat 1 46 0 441 240 13 97 chr20 53156445 53156599 -13511406 + MIR SINE MIR 1 141 -121 1179 247 82 21 chr20 53156602 53156979 -13511026 + MLT1K LTR MaLR 188 587 -1 188 278 69 0 chr20 53157128 53157200 -13510805 + MIR SINE MIR 104 180 -82 2261 106 0 13 chr20 53157227 53157528 -13510477 + AluSx SINE Alu 1 297 -15 323 263 62 86 chr20 53157889 53158132 -13509873 - L2 LINE L2 -64 3249 3013 609 268 155 25 chr20 53158642 53159117 -13508888 - L2 LINE L2 -79 3234 2697 1215 214 121 49 chr20 53159215 53159686 -13508319 + MLT1D LTR MaLR 1 505 0 2138 112 0 0 chr20 53159792 53160068 -13507937 + AluSx SINE Alu 1 276 -36 405 0 0 0 chr20 53160074 53160119 -13507886 + (CAAAA)n Simple_repeat Simple_repeat 3 47 0 554 278 142 0 chr20 53160535 53160747 -13507258 - MIR SINE MIR 0 262 21 241 290 0 0 chr20 53160776 53160838 -13507167 + MIR SINE MIR 73 134 -74 2128 122 3 7 chr20 53160840 53161135 -13506870 - AluSx SINE Alu -18 294 1 33 0 0 0 chr20 53161146 53161179 -13506826 + AT_rich Low_complexity Low_complexity 1 33 0 2051 136 0 3 chr20 53161182 53161483 -13506522 - AluSx SINE Alu -12 300 1 1192 146 0 0 chr20 53161485 53161656 -13506349 - AluJb SINE Alu -8 304 134 2168 130 0 0 chr20 53161656 53161955 -13506050 - AluSx SINE Alu -13 299 1 360 264 83 16 chr20 53161955 53162076 -13505929 + MIR SINE MIR 122 250 -12 306 207 67 89 chr20 53162265 53162400 -13505605 + MER5A DNA MER1_type 26 157 -32 2287 135 100 59 chr20 53162407 53162871 -13505134 - LTR54 LTR ERV1 0 510 66 2083 93 27 33 chr20 53162871 53163171 -13504834 - AluSq SINE Alu -15 298 1 1577 156 47 0 chr20 53163172 53163448 -13504557 - AluJo SINE Alu -21 291 3 2287 135 100 59 chr20 53163448 53163471 -13504534 - LTR54 LTR ERV1 -443 67 1 549 306 78 35 chr20 53164853 53165200 -13502805 - L2 LINE L2 -1 3312 2951 735 142 16 24 chr20 53168276 53168403 -13499602 - FLAM_C SINE Alu -3 140 15 878 141 0 22 chr20 53169209 53169344 -13498661 - FLAM_C SINE Alu 0 133 2 198 339 46 9 chr20 53169365 53169474 -13498531 + L2 LINE L2 3133 3245 -27 205 321 110 0 chr20 53170098 53170207 -13497798 + MIR3 SINE MIR 53 173 -35 2013 136 0 26 chr20 53171003 53171312 -13496693 - AluJo SINE Alu -11 301 1 181 83 56 0 chr20 53172378 53172414 -13495591 + (TTG)n Simple_repeat Simple_repeat 2 39 0 2367 94 3 0 chr20 53173843 53174141 -13493864 + AluSp SINE Alu 1 299 -14 190 321 36 0 chr20 53174524 53174608 -13493397 + MIR SINE MIR 20 106 -156 257 246 0 15 chr20 53175076 53175141 -13492864 - MIR SINE MIR -2 260 197 481 254 108 67 chr20 53175406 53175721 -13492284 + MER102a DNA MER1_type 2 329 -1 21 0 0 0 chr20 53176243 53176264 -13491741 + AT_rich Low_complexity Low_complexity 1 21 0 2252 96 0 39 chr20 53176507 53176819 -13491186 - AluSq SINE Alu -13 300 1 490 290 16 108 chr20 53177316 53177630 -13490375 - L2 LINE L2 0 3272 2988 25 51 0 0 chr20 53178123 53178162 -13489843 + AT_rich Low_complexity Low_complexity 1 39 0 2456 82 3 3 chr20 53178323 53178628 -13489377 - AluSg SINE Alu -5 305 1 2327 88 0 3 chr20 53178817 53179114 -13488891 - AluSq SINE Alu -17 296 1 25 0 0 0 chr20 53179978 53180003 -13488002 + AT_rich Low_complexity Low_complexity 1 25 0 838 134 0 16 chr20 53180007 53180134 -13487871 - AluJb SINE Alu -187 125 1 1875 119 6 55 chr20 53181101 53181412 -13486593 - AluSx SINE Alu -16 296 1 374 289 64 59 chr20 53181790 53181994 -13486011 + L2 LINE L2 2895 3099 -173 2409 91 0 28 chr20 53182185 53182505 -13485500 + AluSx SINE Alu 1 311 -1 2224 92 3 0 chr20 53183617 53183927 -13484078 - AluSx SINE Alu 0 311 1 198 0 0 0 chr20 53183929 53183951 -13484054 + (T)n Simple_repeat Simple_repeat 1 22 0 2142 94 0 7 chr20 53184112 53184387 -13483618 - AluSc SINE Alu -13 296 24 312 77 0 0 chr20 53184401 53184440 -13483565 - AluSc SINE Alu -260 39 1 1919 159 0 35 chr20 53184442 53184757 -13483248 - AluJo SINE Alu -8 304 1 2400 89 0 0 chr20 53185126 53185429 -13482576 - AluSx SINE Alu -8 304 2 207 125 0 0 chr20 53186471 53186511 -13481494 + (TG)n Simple_repeat Simple_repeat 2 41 0 2150 109 20 3 chr20 53187684 53187977 -13480028 - AluSg SINE Alu -12 298 1 1529 141 7 91 chr20 53188484 53188781 -13479224 - AluJo SINE Alu -20 292 21 189 291 64 57 chr20 53189407 53189548 -13478457 + L2 LINE L2 3117 3258 -55 899 188 19 114 chr20 53190733 53190796 -13477209 - L1MD2 LINE L1 -4 6355 6288 2230 92 7 0 chr20 53190796 53191100 -13476905 + AluSq SINE Alu 1 306 0 899 188 19 114 chr20 53191100 53191306 -13476699 - L1MD2 LINE L1 -71 6288 6111 2423 90 3 3 chr20 53192777 53193089 -13474916 - AluSp SINE Alu -1 312 1 465 294 50 38 chr20 53193124 53193386 -13474619 - HAL1b LINE L1 -736 612 348 593 181 0 26 chr20 53193394 53193510 -13474495 - FRAM SINE Alu -1 175 63 317 270 54 81 chr20 53193563 53193785 -13474220 - HAL1b LINE L1 -1034 314 99 25 0 0 28 chr20 53193800 53193816 -13474189 + AT_rich Low_complexity Low_complexity 1 16 -19 2457 65 7 3 chr20 53193816 53194108 -13473897 - AluSp SINE Alu -20 293 1 25 0 0 28 chr20 53194108 53194127 -13473878 + AT_rich Low_complexity Low_complexity 16 35 0 1232 191 24 0 chr20 53194156 53194366 -13473639 - MSTB LTR MaLR -211 215 1 2382 87 0 0 chr20 53197606 53197895 -13470110 - AluSg SINE Alu -19 291 3 1808 160 7 17 chr20 53197916 53198209 -13469796 - AluJb SINE Alu -22 290 1 340 283 44 0 chr20 53198389 53198502 -13469503 - LTR16C LTR ERVL -150 341 224 1769 118 32 4 chr20 53198510 53198756 -13469249 + AluSx SINE Alu 35 287 -25 653 191 69 8 chr20 53198877 53199008 -13468997 - FLAM_C SINE Alu -3 140 2 1683 137 0 84 chr20 53199487 53199822 -13468183 + AluJo SINE Alu 1 307 -5 378 272 96 16 chr20 53199921 53200046 -13467959 + L2 LINE L2 3138 3272 0 2468 62 14 0 chr20 53201127 53201415 -13466590 - AluSg SINE Alu -18 292 1 1538 176 86 11 chr20 53202180 53202459 -13465546 - AluJo SINE Alu -12 300 1 2093 131 0 7 chr20 53202466 53202771 -13465234 - AluSx SINE Alu -9 303 1 22 0 0 0 chr20 53203577 53203599 -13464406 + AT_rich Low_complexity Low_complexity 1 22 0 243 221 59 15 chr20 53204430 53204498 -13463507 - L2 LINE L2 0 3313 3243 22 0 0 0 chr20 53204863 53204885 -13463120 + AT_rich Low_complexity Low_complexity 1 22 0 484 298 30 6 chr20 53206111 53206279 -13461726 + L2 LINE L2 2531 2702 -612 830 169 0 42 chr20 53206300 53206442 -13461563 + FLAM_C SINE Alu 1 136 -7 1105 273 137 22 chr20 53206482 53206936 -13461069 + L2 LINE L2 2805 3310 -3 448 318 26 7 chr20 53207049 53207203 -13460802 + L1MEc LINE L1 274 430 -5966 727 218 115 40 chr20 53207349 53207697 -13460308 + L1MEc LINE L1 801 1174 -5222 341 364 0 0 chr20 53207756 53207855 -13460150 + L1MEc LINE L1 1287 1385 -5011 1345 189 60 23 chr20 53207866 53208131 -13459874 + AluJo SINE Alu 1 275 -37 252 0 0 0 chr20 53208134 53208162 -13459843 + (TC)n Simple_repeat Simple_repeat 1 28 0 986 234 127 37 chr20 53208163 53209106 -13458899 + L1MEc LINE L1 1633 3489 -2726 644 196 38 64 chr20 53209103 53209326 -13458679 + L1ME1 LINE L1 5957 6184 0 * 1614 174 3 44 chr20 53209919 53210235 -13457770 - AluJo SINE Alu -1 311 9 1637 130 42 0 chr20 53210426 53210664 -13457341 + AluSp SINE Alu 1 248 -65 523 184 0 0 chr20 53210688 53210786 -13457219 - Charlie5 DNA MER1_type -28 2584 2487 231 163 0 0 chr20 53210786 53210835 -13457170 + AluSp SINE Alu 253 301 -2 1062 153 0 48 chr20 53210982 53211171 -13456834 - AluJ SINE Alu -11 301 122 325 199 151 0 chr20 53211259 53211405 -13456600 - HAL1 LINE L1 -304 2203 2036 2039 129 3 68 chr20 53211411 53211751 -13456254 - 7SLRNA srpRNA srpRNA -1 319 2 781 182 8 8 chr20 53211752 53211884 -13456121 - AluJ SINE Alu -176 136 5 1092 192 113 21 chr20 53211991 53212282 -13455723 - MER33 DNA MER1_type -1 323 6 341 235 187 42 chr20 53212289 53212455 -13455550 - HAL1 LINE L1 -581 1926 1737 2248 270 164 34 chr20 53212529 53212784 -13455221 - HAL1 LINE L1 -622 1885 1665 2009 78 16 4 chr20 53212784 53213039 -13454966 - AluSq SINE Alu -9 304 47 2248 270 164 34 chr20 53213039 53214346 -13453659 - HAL1 LINE L1 -842 1665 119 600 129 10 0 chr20 53214375 53214476 -13453529 - L1MB3 LINE L1 0 6183 6082 22 70 0 0 chr20 53214480 53214523 -13453482 + AT_rich Low_complexity Low_complexity 1 43 0 248 214 97 62 chr20 53216202 53216356 -13451649 + MIR SINE MIR 44 253 -9 770 82 0 0 chr20 53216762 53216860 -13451145 + HY3 scRNA scRNA 1 98 -3 260 269 142 60 chr20 53217107 53217241 -13450764 - MIR SINE MIR -37 225 81 2147 112 0 10 chr20 53218063 53218358 -13449647 + AluSx SINE Alu 1 292 -20 2327 112 3 0 chr20 53220899 53221203 -13446802 + AluSx SINE Alu 1 305 -7 506 301 40 6 chr20 53221548 53221721 -13446284 - MIR SINE MIR 0 262 84 24 0 0 0 chr20 53222346 53222370 -13445635 + AT_rich Low_complexity Low_complexity 1 24 0 261 328 164 17 chr20 53222811 53223049 -13444956 + L2 LINE L2 2583 2855 -459 976 160 13 101 chr20 53224424 53224661 -13443344 - MER20 DNA MER1_type -3 216 1 198 277 148 0 chr20 53228297 53228398 -13439607 + L3 LINE CR1 189 304 -1273 191 190 392 0 chr20 53229079 53229158 -13438847 + MIR SINE MIR 31 140 -122 2073 117 7 16 chr20 53229395 53229702 -13438303 + AluJo SINE Alu 1 304 -8 2219 95 0 30 chr20 53230340 53230644 -13437361 + AluSg1 SINE Alu 1 295 -14 237 324 139 0 chr20 53230957 53231065 -13436940 + L2 LINE L2 3149 3271 -1 1934 135 152 3 chr20 53232492 53232855 -13435150 - MSTB LTR MaLR 0 426 10 246 338 84 34 chr20 53234418 53234655 -13433350 + L1MC/D LINE L1 5600 5848 -1960 338 228 47 5 chr20 53238992 53239093 -13428912 - L1MD3 LINE L1 -6 7976 7678 2251 126 9 23 chr20 53239256 53239598 -13428407 - MER1B DNA MER1_type 0 337 1 314 234 106 50 chr20 53242277 53242418 -13425587 + L1ME LINE L1 5586 5734 -387 231 36 0 0 chr20 53242503 53242531 -13425474 + (A)n Simple_repeat Simple_repeat 1 28 0 2644 54 0 6 chr20 53242552 53242865 -13425140 + AluY SINE Alu 1 311 0 2126 90 66 24 chr20 53243061 53243349 -13424656 - AluSx SINE Alu -12 300 1 205 299 43 0 chr20 53243994 53244085 -13423920 + MIR SINE MIR 87 146 -62 601 152 0 0 chr20 53244569 53244661 -13423344 - AluSg/x SINE Alu -13 296 205 848 244 100 34 chr20 53244840 53245279 -13422726 + L1MC5 LINE L1 7461 7928 -33 2076 121 28 0 chr20 53245568 53245857 -13422148 + AluSg SINE Alu 1 297 -13 2233 96 7 3 chr20 53247044 53247337 -13420668 + AluSq SINE Alu 1 294 -19 287 277 47 1 chr20 53247461 53247555 -13420450 + MER5A DNA MER1_type 54 161 -28 2457 75 0 23 chr20 53247742 53248050 -13419955 + AluSg SINE Alu 1 301 -9 186 358 21 0 chr20 53248634 53248729 -13419276 - MIR SINE MIR -45 217 121 341 269 35 76 chr20 53248848 53248993 -13419012 - MIR3 SINE MIR -59 149 11 803 263 69 18 chr20 53249391 53249665 -13418340 + MLT1K LTR MaLR 289 576 -12 206 279 139 13 chr20 53250270 53250349 -13417656 + MIR SINE MIR 58 146 -62 2412 100 7 0 chr20 53250710 53251019 -13416986 - AluSx SINE Alu -1 311 1 1907 109 0 0 chr20 53252418 53252675 -13415330 + AluSx SINE Alu 43 299 -13 2660 222 14 22 chr20 53252682 53252863 -13415142 + MER82 DNA MER2_type 26 207 -446 2267 112 0 0 chr20 53252863 53253167 -13414838 + AluSx SINE Alu 1 304 -8 2660 222 14 22 chr20 53253167 53253612 -13414393 + MER82 DNA MER2_type 207 647 -6 2034 129 0 7 chr20 53253657 53253952 -13414053 - AluSx SINE Alu -15 297 5 1772 169 0 3 chr20 53254233 53254528 -13413477 + AluJo SINE Alu 4 297 -15 2219 98 0 22 chr20 53254905 53255222 -13412783 + AluSx SINE Alu 1 310 -2 457 291 109 6 chr20 53255610 53255785 -13412220 - MIR SINE MIR -64 198 6 702 312 47 32 chr20 53256557 53256961 -13411044 + L2 LINE L2 2819 3228 -85 180 0 0 0 chr20 53256993 53257013 -13410992 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2114 98 0 0 chr20 53257017 53257292 -13410713 - AluSx SINE Alu -37 275 1 191 35 0 35 chr20 53257298 53257327 -13410678 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 341 330 30 0 chr20 53257553 53257653 -13410352 - MIR SINE MIR -51 211 109 2406 77 0 10 chr20 53257653 53257965 -13410040 + AluSq SINE Alu 1 309 -4 1869 136 0 36 chr20 53258686 53258987 -13409018 - AluJo SINE Alu -22 290 1 298 315 77 50 chr20 53258991 53259172 -13408833 - MIR SINE MIR -48 214 29 1732 165 0 31 chr20 53259240 53259561 -13408444 + AluJb SINE Alu 1 311 -1 2225 103 0 7 chr20 53259675 53259976 -13408029 + AluSx SINE Alu 1 299 -13 2873 134 54 16 chr20 53260039 53260473 -13407532 + MER51C LTR ERV1 5 508 -132 2139 119 7 0 chr20 53260473 53260783 -13407222 - AluSx SINE Alu 0 312 1 2873 134 54 16 chr20 53260783 53260922 -13407083 + MER51C LTR ERV1 508 640 0 197 417 19 0 chr20 53262883 53262991 -13405014 - MIR3 SINE MIR -87 121 12 205 267 33 0 chr20 53263272 53263332 -13404673 + (CCCGG)n Simple_repeat Simple_repeat 5 66 0 316 176 0 123 chr20 53263726 53263930 -13404075 + (CACCC)n Simple_repeat Simple_repeat 1 179 0 203 286 57 0 chr20 53264010 53264080 -13403925 + L2 LINE L2 3238 3311 -2 245 215 31 31 chr20 53264224 53264289 -13403716 + MIR SINE MIR 81 145 -63 485 310 70 0 chr20 53265133 53265291 -13402714 + MIR SINE MIR 3 171 -91 318 118 0 103 chr20 53265489 53265557 -13402448 - MER58 DNA MER1_type -3 2417 2357 2181 124 0 3 chr20 53265595 53265902 -13402103 + AluSx SINE Alu 1 306 -6 345 239 76 0 chr20 53266036 53266128 -13401877 - MER58 DNA MER1_type -2149 271 173 1945 158 0 10 chr20 53266564 53266867 -13401138 + AluJo SINE Alu 1 300 -12 1944 131 0 26 chr20 53266923 53267255 -13400750 + AluSx SINE Alu 5 312 0 270 0 0 0 chr20 53267777 53267807 -13400198 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 2046 109 0 0 chr20 53267807 53268083 -13399922 - AluSx SINE Alu -30 282 7 516 169 21 21 chr20 53268387 53268529 -13399476 + MER53 DNA DNA 23 164 -25 1946 121 11 4 chr20 53268530 53268834 -13399171 + AluSx SINE Alu 1 306 0 354 23 0 0 chr20 53268857 53268900 -13399105 + (TG)n Simple_repeat Simple_repeat 2 44 0 2020 146 0 3 chr20 53269000 53269302 -13398703 + AluJb SINE Alu 6 306 -6 281 377 8 66 chr20 53269987 53270083 -13397922 - MIR SINE MIR -29 233 133 1946 162 0 6 chr20 53270083 53270397 -13397608 - AluSx SINE Alu 0 312 1 281 377 8 66 chr20 53270397 53270544 -13397461 - MIR SINE MIR -129 133 4 2072 113 3 0 chr20 53270614 53270905 -13397100 + AluY SINE Alu 1 292 -19 645 133 26 26 chr20 53271224 53271337 -13396668 - AluJb SINE Alu -199 113 1 2011 102 44 0 chr20 53271376 53271670 -13396335 - AluSg SINE Alu -3 307 1 2125 110 3 25 chr20 53271737 53272054 -13395951 + AluSg SINE Alu 1 310 0 866 234 259 24 chr20 53272127 53272546 -13395459 + L2 LINE L2 2791 3300 -13 986 99 8 0 chr20 53272547 53272678 -13395327 + AluSq/x SINE Alu 1 132 -180 1504 88 0 5 chr20 53272682 53272876 -13395129 + AluSq SINE Alu 1 193 -120 224 200 0 0 chr20 53272879 53272919 -13395086 + MIR SINE MIR 112 151 -57 1380 174 41 14 chr20 53272921 53273214 -13394791 + AluSx SINE Alu 2 302 -10 315 361 78 45 chr20 53273283 53273618 -13394387 + L2 LINE L2 2966 3311 -2 449 295 64 13 chr20 53273964 53274098 -13393907 + MIR SINE MIR 11 170 -92 2092 123 0 0 chr20 53274098 53274433 -13393572 + AluSx SINE Alu 1 335 0 449 295 64 13 chr20 53274433 53274497 -13393508 + MIR SINE MIR 170 229 -33 747 299 76 69 chr20 53275045 53275584 -13392421 + MLT1K LTR MaLR 7 549 -39 2263 106 7 0 chr20 53275933 53276235 -13391770 - AluSx SINE Alu -8 304 1 2260 97 13 0 chr20 53276735 53277044 -13390961 + AluSq SINE Alu 1 313 0 209 300 88 0 chr20 53277510 53277590 -13390415 - MIR SINE MIR -20 242 156 2040 117 7 3 chr20 53277590 53277890 -13390115 - AluSx SINE Alu -11 301 1 2062 132 0 3 chr20 53278819 53279122 -13388883 - AluJb SINE Alu -7 305 4 240 206 174 11 chr20 53279122 53279214 -13388791 - MIR SINE MIR -36 226 120 251 250 0 0 chr20 53280412 53280464 -13387541 - MER45 DNA AcHobo 0 1581 1530 985 157 26 42 chr20 53280464 53280493 -13387512 + AluSg/x SINE Alu 113 141 -171 2196 98 27 0 chr20 53280493 53280788 -13387217 + AluSq SINE Alu 1 303 -10 985 157 26 42 chr20 53280788 53280949 -13387056 + AluSg/x SINE Alu 141 300 -12 2177 102 3 32 chr20 53280973 53281287 -13386718 + AluSx SINE Alu 2 306 -6 1237 69 12 0 chr20 53281287 53281447 -13386558 + AluSg/x SINE Alu 134 295 -17 622 194 0 0 chr20 53281449 53281552 -13386453 + AluJb SINE Alu 174 276 -36 236 301 219 41 chr20 53282161 53282530 -13385475 + L2 LINE L2 2874 3308 -5 223 308 61 34 chr20 53282695 53283033 -13384972 - L2 LINE L2 -169 3103 2676 341 297 45 0 chr20 53283462 53283573 -13384432 - MIR SINE MIR -80 182 67 269 219 27 27 chr20 53283630 53283703 -13384302 + MIR SINE MIR 58 130 -78 2083 146 0 9 chr20 53283706 53284021 -13383984 - AluSx SINE Alu 0 312 1 893 121 0 0 chr20 53284045 53284169 -13383836 - FLAM_C SINE Alu -19 124 1 390 101 0 0 chr20 53284294 53284363 -13383642 + (TC)n Simple_repeat Simple_repeat 1 69 0 333 353 78 24 chr20 53284684 53284851 -13383154 - MIR SINE MIR -65 197 22 409 317 133 15 chr20 53284969 53285404 -13382601 - L2 LINE L2 -69 3203 2705 362 333 0 15 chr20 53285505 53285637 -13382368 - L3b LINE CR1 -116 1467 1338 512 297 32 19 chr20 53286393 53286629 -13381376 - MIR SINE MIR -9 253 13 580 272 68 58 chr20 53286691 53286735 -13381270 - MER63A DNA MER1_type -1480 208 166 2134 107 10 3 chr20 53286735 53287043 -13380962 + AluSx SINE Alu 1 310 -2 580 272 68 58 chr20 53287043 53287204 -13380801 - MER63A DNA MER1_type -1522 166 1 248 223 160 32 chr20 53287599 53287693 -13380312 - MIR3 SINE MIR -53 155 82 1977 160 0 0 chr20 53287723 53288035 -13379970 - AluJb SINE Alu 0 312 1 483 276 66 46 chr20 53288106 53288302 -13379703 + L2 LINE L2 2985 3184 -88 693 204 0 78 chr20 53288463 53288504 -13379501 - MER58A DNA MER1_type -2196 224 181 2212 115 0 0 chr20 53288504 53288809 -13379196 + AluSx SINE Alu 1 305 -7 693 204 0 78 chr20 53288809 53288958 -13379047 - MER58A DNA MER1_type -2239 181 49 481 212 32 184 chr20 53289026 53289126 -13378879 - MIR SINE MIR -43 219 178 1663 178 19 16 chr20 53289126 53289435 -13378570 + AluJb SINE Alu 2 311 -1 481 212 32 184 chr20 53289435 53289584 -13378421 - MIR SINE MIR -84 178 8 265 315 54 15 chr20 53290894 53291024 -13376981 - MIR3 SINE MIR -40 168 34 417 289 171 19 chr20 53291055 53291318 -13376687 + L2 LINE L2 2933 3235 -78 2110 104 0 0 chr20 53291359 53291637 -13376368 + AluSx SINE Alu 14 291 -21 24 32 0 0 chr20 53291637 53291668 -13376337 + AT_rich Low_complexity Low_complexity 1 31 0 464 158 13 0 chr20 53291668 53291744 -13376261 - AluJo SINE Alu -178 134 58 2215 112 0 0 chr20 53292713 53293007 -13374998 + AluSx SINE Alu 1 294 -18 181 314 171 7 chr20 53293158 53293298 -13374707 - MIR SINE MIR -25 237 75 658 175 75 8 chr20 53293341 53293461 -13374544 + FLAM_A SINE Alu 2 129 -4 469 197 131 61 chr20 53294536 53294659 -13373346 - ORSL DNA AcHobo -63 212 99 2382 79 0 3 chr20 53294659 53294964 -13373041 - AluSp SINE Alu -9 304 1 1549 138 9 120 chr20 53294967 53295300 -13372705 - AluJo SINE Alu -6 296 1 469 197 131 61 chr20 53295300 53295370 -13372635 - ORSL DNA AcHobo -177 98 1 273 325 81 6 chr20 53295877 53296037 -13371968 - L1P5 LINE L1 -721 5430 5259 309 26 0 0 chr20 53296094 53296132 -13371873 + (TG)n Simple_repeat Simple_repeat 1 38 0 2353 90 3 0 chr20 53296520 53296831 -13371174 + AluSp SINE Alu 1 312 -1 769 155 7 84 chr20 53296841 53296878 -13371127 + AluJo SINE Alu 1 39 -273 1904 125 3 48 chr20 53296878 53297190 -13370815 - AluSx SINE Alu -14 298 1 769 155 7 84 chr20 53297190 53297307 -13370698 + AluJo SINE Alu 39 143 -169 357 114 38 0 chr20 53297307 53297376 -13370629 + MER4D LTR ERV1 671 845 -30 1011 140 0 80 chr20 53297389 53297448 -13370557 + AluJo SINE Alu 129 191 -121 2492 57 0 25 chr20 53297448 53297766 -13370239 - AluY SINE Alu -1 310 1 1011 140 0 80 chr20 53297766 53297906 -13370099 + AluJo SINE Alu 191 312 0 671 171 0 0 chr20 53297920 53298025 -13369980 - AluJb SINE Alu -207 105 1 194 0 39 0 chr20 53298230 53298256 -13369749 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 1269 162 3 128 chr20 53298278 53298574 -13369431 - AluSp SINE Alu -54 259 1 2234 114 0 6 chr20 53298580 53298895 -13369110 - AluSq SINE Alu 0 313 1 1714 154 0 14 chr20 53299873 53300185 -13367820 - AluJo SINE Alu 0 308 1 2339 87 7 0 chr20 53300793 53301092 -13366913 + AluSq SINE Alu 1 301 -12 428 249 102 45 chr20 53301165 53301227 -13366778 + MIR3 SINE MIR 1 58 -150 2650 42 0 0 chr20 53301227 53301535 -13366470 - AluY SINE Alu -3 308 1 428 249 102 45 chr20 53301535 53301649 -13366356 + MIR3 SINE MIR 58 187 -21 2294 125 0 0 chr20 53301747 53302051 -13365954 + AluSq SINE Alu 1 304 -9 1191 187 36 72 chr20 53302065 53302204 -13365801 - MLT1C LTR MaLR -5 462 320 3361 112 35 21 chr20 53302204 53302724 -13365281 - MER1A DNA MER1_type 0 527 1 1191 187 36 72 chr20 53302724 53302915 -13365090 - MLT1C LTR MaLR -147 320 144 2093 127 14 0 chr20 53302916 53303207 -13364798 + AluSx SINE Alu 1 295 -17 1080 215 27 70 chr20 53303752 53304064 -13363941 - MLT1A1 LTR MaLR -23 444 46 1844 171 3 10 chr20 53304064 53304357 -13363648 - AluSx SINE Alu -21 291 1 1080 215 27 70 chr20 53304357 53304402 -13363603 - MLT1A1 LTR MaLR -421 46 1 364 223 61 26 chr20 53304527 53304719 -13363286 + MLT1E3 LTR MaLR 5 211 -413 1005 99 0 0 chr20 53304720 53304851 -13363154 - AluSg/x SINE Alu -7 305 175 1738 178 107 24 chr20 53304853 53305235 -13362770 + MLT1E3 LTR MaLR 211 624 0 446 285 6 38 chr20 53305287 53305445 -13362560 + MIR SINE MIR 2 154 -108 2417 110 0 0 chr20 53306062 53306410 -13361595 + AluSx SINE Alu 1 348 0 3124 210 11 39 chr20 53306470 53307195 -13360810 + L1MB7 LINE L1 5419 6123 -61 1082 118 65 0 chr20 53307195 53307348 -13360657 - AluSg/x SINE Alu -16 296 134 1552 168 4 4 chr20 53307348 53307598 -13360407 - AluJb SINE Alu -16 296 47 410 234 65 55 chr20 53307679 53307880 -13360125 + L2 LINE L2 2994 3196 -117 1812 122 0 0 chr20 53307910 53308155 -13359850 - AluSq SINE Alu -3 310 66 708 53 0 0 chr20 53308176 53308270 -13359735 - AluY SINE Alu -4 307 214 422 264 9 19 chr20 53308272 53308378 -13359627 + L2 LINE L2 3209 3313 0 1884 168 3 13 chr20 53308487 53308802 -13359203 - AluJb SINE Alu 0 312 1 315 0 0 0 chr20 53309423 53309458 -13358547 + (TG)n Simple_repeat Simple_repeat 2 36 0 1810 67 9 9 chr20 53309752 53309976 -13358029 - AluSg/x SINE Alu -3 309 86 747 275 50 0 chr20 53309993 53310211 -13357794 + MIR SINE MIR 31 259 -3 653 288 83 43 chr20 53310223 53310293 -13357712 - L1ME4a LINE L1 -215 5906 5840 1762 112 105 0 chr20 53310293 53310551 -13357454 - AluSg SINE Alu -25 285 1 653 288 83 43 chr20 53310551 53310855 -13357150 - L1ME4a LINE L1 -281 5840 5517 832 120 0 0 chr20 53310858 53310975 -13357030 + FLAM_C SINE Alu 1 117 -16 2223 148 3 0 chr20 53310998 53311309 -13356696 + AluSx SINE Alu 1 312 0 1984 130 9 40 chr20 53311496 53311818 -13356187 - AluJo SINE Alu 0 312 1 1903 145 12 6 chr20 53311839 53312177 -13355828 + L1MB3 LINE L1 5634 5973 -210 1735 168 31 21 chr20 53312179 53312470 -13355535 + AluJo SINE Alu 1 294 -18 370 303 35 30 chr20 53312476 53312649 -13355356 - MIR3 SINE MIR -54 154 17 2435 99 0 0 chr20 53313118 53313422 -13354583 + AluSq SINE Alu 1 304 -9 2133 182 26 26 chr20 53313969 53314426 -13353579 - MSTB2 LTR MaLR 0 457 1 1763 140 15 85 chr20 53314503 53314709 -13353296 - AluJb SINE Alu -7 305 129 2431 84 7 0 chr20 53314709 53315007 -13352998 + AluSx SINE Alu 1 300 -12 1763 140 15 85 chr20 53315007 53315128 -13352877 - AluJb SINE Alu -183 129 1 217 286 27 89 chr20 53316127 53316239 -13351766 - MIR SINE MIR -86 122 31 365 296 64 0 chr20 53316431 53316556 -13351449 + MIR3 SINE MIR 30 162 -46 2205 115 7 7 chr20 53316566 53316870 -13351135 + AluSx SINE Alu 1 304 -8 250 307 55 31 chr20 53317180 53317307 -13350698 + MIR SINE MIR 102 231 -31 2374 96 0 0 chr20 53317679 53317980 -13350025 - AluSq SINE Alu -12 301 1 324 65 0 0 chr20 53317987 53318033 -13349972 + MADE1 DNA Mariner 35 80 0 188 167 188 73 chr20 53318302 53318398 -13349607 + MIR SINE MIR 30 136 -72 441 211 24 24 chr20 53318405 53318528 -13349477 + MER117 DNA MER1_type 1 123 -74 2330 118 0 9 chr20 53318573 53318888 -13349117 + AluSx SINE Alu 1 312 0 1355 136 9 55 chr20 53318908 53319128 -13348877 + AluJb SINE Alu 1 210 -102 2335 92 0 3 chr20 53319175 53319470 -13348535 - AluSg SINE Alu -13 297 4 239 342 13 0 chr20 53319558 53319634 -13348371 + MLT1K LTR MaLR 184 260 -328 427 274 0 18 chr20 53319655 53319768 -13348237 + MLT1K LTR MaLR 455 565 -23 2067 104 3 47 chr20 53319937 53320277 -13347728 - AluSx SINE Alu 0 327 1 2132 127 16 0 chr20 53320306 53320613 -13347392 - AluSx SINE Alu 0 312 1 2605 69 0 0 chr20 53321040 53321345 -13346660 - AluSg SINE Alu -5 305 1 341 328 8 0 chr20 53321584 53321703 -13346302 + MIR SINE MIR 71 190 -72 2307 108 0 0 chr20 53322328 53322625 -13345380 + AluSx SINE Alu 1 297 -15 309 294 4 21 chr20 53322645 53322938 -13345067 + (CA)n Simple_repeat Simple_repeat 1 287 0 2609 68 0 3 chr20 53323628 53323937 -13344068 + AluSq SINE Alu 1 308 -5 1243 127 0 0 chr20 53324672 53324864 -13343141 - AluSx SINE Alu 0 307 116 855 109 0 0 chr20 53324932 53325042 -13342963 - AluSx SINE Alu -203 110 1 450 226 21 0 chr20 53325051 53325144 -13342861 + MLT1F1 LTR MaLR 103 197 -370 291 114 0 0 chr20 53325170 53325214 -13342791 + (CA)n Simple_repeat Simple_repeat 1 44 0 230 297 81 0 chr20 53325224 53325298 -13342707 + MLT1F1 LTR MaLR 311 390 -264 363 238 63 40 chr20 53325341 53325467 -13342538 + MIR SINE MIR 69 197 -65 815 182 0 11 chr20 53325470 53325651 -13342354 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 942 145 0 0 chr20 53325666 53325832 -13342173 + (TGGA)n Simple_repeat Simple_repeat 3 168 0 237 283 234 0 chr20 53327001 53327146 -13340859 - MIR SINE MIR -70 192 14 473 322 94 10 chr20 53328000 53328202 -13339803 + MIR SINE MIR 31 249 -13 1694 205 98 12 chr20 53328248 53328418 -13339587 + MLT1C LTR MaLR 1 155 -312 747 160 0 30 chr20 53328418 53328549 -13339456 + FLAM_C SINE Alu 1 127 -6 1339 163 81 64 chr20 53328554 53328837 -13339168 + AluJo SINE Alu 1 288 -24 1694 205 98 12 chr20 53328837 53329090 -13338915 + MLT1C LTR MaLR 158 467 0 365 302 188 26 chr20 53329091 53329283 -13338722 - MIR SINE MIR -22 240 18 280 295 124 8 chr20 53329345 53329474 -13338531 - MIR SINE MIR -104 158 15 2059 147 0 0 chr20 53330123 53330422 -13337583 + AluJo SINE Alu 1 299 -13 762 115 39 15 chr20 53330528 53330658 -13337347 - FLAM_C SINE Alu 0 133 1 272 313 71 0 chr20 53330819 53330918 -13337087 - MIR SINE MIR -70 192 87 192 298 32 32 chr20 53331017 53331111 -13336894 - MIR SINE MIR -32 230 137 2392 109 0 0 chr20 53331112 53331425 -13336580 - AluSq SINE Alu 0 313 1 2350 107 0 0 chr20 53331425 53331723 -13336282 - AluSx SINE Alu -14 298 1 328 307 10 0 chr20 53332320 53332421 -13335584 + L1MC/D LINE L1 5690 5791 -2017 334 134 30 15 chr20 53332518 53332585 -13335420 - MIR SINE MIR -50 212 145 2082 139 0 3 chr20 53332593 53332888 -13335117 + AluJo SINE Alu 19 312 0 285 266 18 0 chr20 53332889 53332998 -13335007 + (TA)n Simple_repeat Simple_repeat 2 112 0 180 254 45 100 chr20 53333051 53333114 -13334891 - MIR SINE MIR -136 126 70 1908 139 3 48 chr20 53333114 53333234 -13334771 + AluJo SINE Alu 1 125 -187 2293 73 0 47 chr20 53333234 53333535 -13334470 + AluSc SINE Alu 6 292 -17 1908 139 3 48 chr20 53333535 53333730 -13334275 + AluJo SINE Alu 125 302 -10 180 254 45 100 chr20 53333730 53333776 -13334229 - MIR SINE MIR -192 70 23 2000 134 10 10 chr20 53334701 53335006 -13332999 + AluJb SINE Alu 6 310 -2 284 330 72 0 chr20 53335070 53335167 -13332838 - MIR SINE MIR -60 148 45 756 236 24 47 chr20 53335216 53335428 -13332577 + MIR SINE MIR 23 229 -33 439 252 155 38 chr20 53335766 53336056 -13331949 + L1ME3A LINE L1 5548 5871 -299 1751 151 28 25 chr20 53336079 53336364 -13331641 + AluJb SINE Alu 1 286 -26 205 156 0 0 chr20 53336364 53336396 -13331609 + (TG)n Simple_repeat Simple_repeat 1 32 0 2284 102 3 0 chr20 53336485 53336778 -13331227 - AluSp SINE Alu -17 296 3 655 158 9 0 chr20 53336808 53336922 -13331083 + L1MB3 LINE L1 6039 6153 -30 2041 149 0 13 chr20 53337202 53337510 -13330495 - AluSx SINE Alu -8 304 1 2123 141 0 3 chr20 53337551 53337849 -13330156 + AluSx SINE Alu 1 297 -15 965 256 114 27 chr20 53337849 53338521 -13329484 - L2 LINE L2 -94 3219 2511 1894 168 3 16 chr20 53338521 53338831 -13329174 - AluJo SINE Alu -4 308 3 2380 75 24 0 chr20 53338976 53339268 -13328737 - AluSg SINE Alu -11 299 1 2297 92 17 3 chr20 53339295 53339590 -13328415 + AluSx SINE Alu 1 299 -13 386 314 7 33 chr20 53339614 53339767 -13328238 + L1MC4a LINE L1 5802 5950 -1858 2567 54 0 3 chr20 53339811 53340109 -13327896 - AluY SINE Alu -14 297 1 2372 102 3 6 chr20 53340220 53340533 -13327472 + AluSx SINE Alu 1 312 0 764 165 20 182 chr20 53341231 53341373 -13326632 + MER63 DNA MER1_type 1 54 -1007 2156 141 0 3 chr20 53341373 53341671 -13326334 + AluSx SINE Alu 1 297 -15 764 165 20 182 chr20 53341671 53341879 -13326126 + MER63 DNA MER1_type 54 294 -767 2031 162 0 13 chr20 53341894 53342208 -13325797 - AluJo SINE Alu -2 310 1 867 168 7 0 chr20 53342208 53342363 -13325642 + MER63 DNA MER1_type 906 1061 0 2416 101 3 0 chr20 53342923 53343229 -13324776 - AluSx SINE Alu -5 307 1 453 294 44 7 chr20 53343312 53343448 -13324557 - MIR3 SINE MIR -7 201 61 269 150 0 0 chr20 53343448 53343488 -13324517 + MER81 DNA DNA 1 40 -74 514 301 21 4 chr20 53344391 53344613 -13323392 + MIR SINE MIR 38 261 -1 366 287 23 23 chr20 53344621 53344750 -13323255 - MIR3 SINE MIR -38 170 42 255 303 8 34 chr20 53345597 53345716 -13322289 + CT-rich Low_complexity Low_complexity 2 117 0 1200 176 5 22 chr20 53346474 53346696 -13321309 - AluJo SINE Alu -10 302 85 690 182 0 35 chr20 53346714 53346857 -13321148 - FLAM_C SINE Alu 0 143 6 2282 108 0 0 chr20 53347190 53347486 -13320519 - AluSx SINE Alu -16 296 1 687 160 0 17 chr20 53347603 53347722 -13320283 + FLAM_C SINE Alu 2 118 -15 38 0 0 0 chr20 53347722 53347760 -13320245 + AT_rich Low_complexity Low_complexity 1 38 0 1209 164 8 78 chr20 53347774 53347910 -13320095 + AluJb SINE Alu 1 114 -198 2413 87 3 0 chr20 53347910 53348209 -13319796 + AluSp SINE Alu 1 300 -13 1209 164 8 78 chr20 53348209 53348316 -13319689 + AluJb SINE Alu 114 227 -85 561 148 0 0 chr20 53348316 53348404 -13319601 - AluSg/x SINE Alu -71 241 154 377 174 0 0 chr20 53348407 53348476 -13319529 + Alu SINE Alu 230 298 -2 491 143 8 25 chr20 53348495 53348614 -13319391 + GA-rich Low_complexity Low_complexity 2 118 0 938 219 70 30 chr20 53349300 53349570 -13318435 - MER113 DNA MER1_type? 0 521 241 781 202 9 41 chr20 53349655 53349873 -13318132 + L1MC3 LINE L1 7568 7778 -7 2047 116 38 3 chr20 53349883 53350175 -13317830 + AluSx SINE Alu 9 310 -2 1575 119 72 103 chr20 53350267 53350587 -13317418 + AluJb SINE Alu 1 310 -2 487 183 8 25 chr20 53350587 53350707 -13317298 + L1MC4 LINE L1 7925 8042 0 315 244 0 0 chr20 53350723 53350801 -13317204 - MER113 DNA MER1_type? -412 109 32 485 202 11 0 chr20 53350902 53350991 -13317014 - AluJ SINE Alu -93 219 130 270 81 0 0 chr20 53351013 53351050 -13316955 + (GA)n Simple_repeat Simple_repeat 2 38 0 2133 116 0 3 chr20 53351050 53351334 -13316671 - AluSq SINE Alu -30 283 1 2104 116 42 0 chr20 53351334 53351618 -13316387 - AluSx SINE Alu -14 298 3 800 136 0 0 chr20 53351622 53351732 -13316273 - AluJ SINE Alu -183 129 20 1529 132 31 62 chr20 53352115 53352250 -13315755 + AluJo SINE Alu 12 150 -162 2340 95 13 3 chr20 53352250 53352554 -13315451 + AluSq SINE Alu 1 307 -6 820 187 30 0 chr20 53352540 53352706 -13315299 + AluJb SINE Alu 120 290 -22 1529 132 31 62 chr20 53352554 53352706 -13315299 + AluJo SINE Alu 150 290 -22 2375 89 3 13 chr20 53352761 53353065 -13314940 + AluSx SINE Alu 1 301 -11 684 231 112 0 chr20 53353541 53353710 -13314295 + MIR SINE MIR 15 202 -60 457 259 142 12 chr20 53353712 53353813 -13314192 + MER5A DNA MER1_type 7 94 -95 2056 109 3 20 chr20 53353813 53354117 -13313888 - AluSx SINE Alu -12 300 2 457 259 142 12 chr20 53354117 53354177 -13313828 + MER5A DNA MER1_type 94 189 0 206 286 48 0 chr20 53354183 53354246 -13313759 + MIR SINE MIR 197 262 0 189 0 0 0 chr20 53354246 53354267 -13313738 + (CAT)n Simple_repeat Simple_repeat 2 22 0 678 168 0 0 chr20 53354314 53354421 -13313584 + L1M1 LINE L1 378 484 -7081 1920 105 10 46 chr20 53355778 53356083 -13311922 - AluSx SINE Alu -18 294 1 588 237 101 48 chr20 53356272 53356500 -13311505 - MIR SINE MIR -5 257 18 1798 152 3 10 chr20 53356724 53357021 -13310984 + AluJo SINE Alu 3 297 -15 1796 142 3 13 chr20 53357022 53357331 -13310674 + AluSx SINE Alu 1 306 -6 419 251 109 6 chr20 53357535 53357710 -13310295 + MLT1H LTR MaLR 41 233 -316 875 144 0 0 chr20 53357728 53357867 -13310138 - FRAM SINE Alu 0 40 1 2282 103 0 0 chr20 53357960 53358271 -13309734 + AluSx SINE Alu 1 311 -1 1481 254 92 5 chr20 53358379 53358823 -13309182 + MER20B DNA MER1_type 247 729 -54 3080 169 11 43 chr20 53358956 53359067 -13308938 + L1MB7 LINE L1 5504 5617 -567 2033 105 14 14 chr20 53359067 53359363 -13308642 - AluSx SINE Alu -16 296 1 3080 169 11 43 chr20 53359363 53359587 -13308418 + L1MB7 LINE L1 5617 5847 -337 1939 131 10 0 chr20 53359587 53359884 -13308121 + AluSx SINE Alu 1 300 -12 3080 169 11 43 chr20 53359884 53360175 -13307830 + L1MB7 LINE L1 5847 6111 -73 1595 160 53 7 chr20 53360181 53360462 -13307543 + AluJo SINE Alu 1 294 -18 2264 57 0 23 chr20 53360464 53360763 -13307242 + AluY SINE Alu 15 306 -5 385 125 16 0 chr20 53360831 53360895 -13307110 + L1MB7 LINE L1 6106 6170 -14 239 292 146 10 chr20 53360940 53361036 -13306969 - L2 LINE L2 -560 2754 2646 2316 54 7 3 chr20 53361059 53361357 -13306648 + AluY SINE Alu 1 299 -12 226 290 159 9 chr20 53361770 53361877 -13306128 - MIR SINE MIR -79 183 61 1876 104 24 44 chr20 53361911 53362209 -13305796 + AluSx SINE Alu 1 292 -20 1243 169 7 91 chr20 53362209 53362385 -13305620 - AluJo SINE Alu -30 282 141 1780 135 46 3 chr20 53362385 53362667 -13305338 + AluSx SINE Alu 1 294 -18 1243 169 7 91 chr20 53362667 53362798 -13305207 - AluJo SINE Alu -171 141 1 24 32 0 0 chr20 53363297 53363328 -13304677 + AT_rich Low_complexity Low_complexity 1 31 0 1580 175 7 23 chr20 53363370 53363673 -13304332 + AluJb SINE Alu 1 298 -14 1950 95 3 44 chr20 53363678 53364025 -13303980 + AluSx SINE Alu 1 312 0 810 199 6 0 chr20 53364100 53364271 -13303734 - AluJo SINE Alu -3 309 138 259 255 28 121 chr20 53364463 53364489 -13303516 - L2 LINE L2 -25 3288 3261 1660 178 0 3 chr20 53364489 53364787 -13303218 - AluJo SINE Alu -15 297 1 259 255 28 121 chr20 53364787 53364901 -13303104 - L2 LINE L2 -52 3261 3161 * 1134 227 95 165 chr20 53364874 53365344 -13302661 - L2 LINE L2 -338 2976 2475 625 169 73 59 chr20 53365344 53365369 -13302636 - AluJo SINE Alu -173 139 116 2028 90 32 4 chr20 53365369 53365698 -13302307 - AluSq SINE Alu 0 337 1 189 0 0 0 chr20 53365698 53365719 -13302286 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 625 169 73 59 chr20 53365719 53365827 -13302178 - AluJo SINE Alu -195 117 2 1134 227 95 165 chr20 53365827 53366161 -13301844 - L2 LINE L2 -839 2475 2103 1566 197 3 7 chr20 53366182 53366481 -13301524 + AluJo SINE Alu 1 298 -14 224 253 172 30 chr20 53366554 53366653 -13301352 + MIR3 SINE MIR 6 118 -90 1839 133 51 0 chr20 53366897 53367191 -13300814 - AluJo SINE Alu 0 312 4 211 318 258 7 chr20 53367705 53367856 -13300149 - MIR SINE MIR -51 211 23 2376 71 0 7 chr20 53367930 53368239 -13299766 - AluY SINE Alu -4 307 1 1981 118 0 7 chr20 53368273 53368562 -13299443 - AluSx SINE Alu -25 287 1 564 194 139 18 chr20 53368562 53368727 -13299278 + MER5C DNA MER1_type 138 322 -2 838 103 9 0 chr20 53368770 53368886 -13299119 + FLAM_C SINE Alu 2 118 -15 1338 152 164 0 chr20 53369366 53369616 -13298389 - AluJb SINE Alu -21 291 1 2390 76 0 0 chr20 53369893 53370194 -13297811 + AluSx SINE Alu 1 301 -11 364 252 70 84 chr20 53370255 53370469 -13297536 + MIR SINE MIR 38 248 -14 199 271 0 0 chr20 53370541 53370589 -13297416 - MIR SINE MIR -12 250 203 201 74 0 0 chr20 53370605 53370632 -13297373 + (T)n Simple_repeat Simple_repeat 1 27 0 2312 109 0 0 chr20 53370645 53371018 -13296987 + AluSq SINE Alu 1 373 0 822 206 0 0 chr20 53371018 53371164 -13296841 - FRAM SINE Alu -30 146 1 1844 159 7 0 chr20 53371203 53371499 -13296506 - AluJb SINE Alu -12 300 3 1672 175 33 3 chr20 53371551 53371854 -13296151 - AluJb SINE Alu 0 312 1 734 211 33 28 chr20 53372556 53372736 -13295269 + MIR SINE MIR 20 200 -62 291 291 89 0 chr20 53372737 53372816 -13295189 + MER81 DNA DNA 29 114 0 2058 121 7 3 chr20 53372829 53373127 -13294878 + AluSx SINE Alu 1 299 -13 819 170 7 7 chr20 53373184 53373319 -13294686 - AluJo SINE Alu -176 136 2 1786 126 50 4 chr20 53373351 53373629 -13294376 - AluSg SINE Alu -19 291 1 1773 144 10 10 chr20 53374035 53374340 -13293665 + AluJb SINE Alu 1 305 -7 813 241 108 21 chr20 53374363 53374604 -13293401 - MIR SINE MIR 0 262 1 2361 78 0 0 chr20 53374708 53375014 -13292991 - AluY SINE Alu -5 306 1 1890 185 19 69 chr20 53375166 53375288 -13292717 + MLT1C LTR MaLR 1 128 -339 2131 117 0 3 chr20 53375288 53375587 -13292418 + AluSx SINE Alu 1 298 -14 1890 185 19 69 chr20 53375587 53375928 -13292077 + MLT1C LTR MaLR 128 441 -26 2058 123 7 0 chr20 53375945 53376253 -13291752 + AluSx SINE Alu 1 310 -2 1808 153 0 3 chr20 53376495 53376783 -13291222 + AluJb SINE Alu 2 288 -24 232 368 35 9 chr20 53376800 53376914 -13291091 + MER5A DNA MER1_type 72 188 -1 336 271 39 90 chr20 53377189 53377290 -13290715 + L2 LINE L2 2743 2835 -479 2199 104 0 3 chr20 53377290 53377589 -13290416 - AluSx SINE Alu -14 298 1 336 271 39 90 chr20 53377589 53377642 -13290363 + L2 LINE L2 2835 2889 -425 266 50 25 0 chr20 53377697 53377737 -13290268 + (CA)n Simple_repeat Simple_repeat 1 41 0 493 198 97 87 chr20 53377768 53377829 -13290176 + Charlie8 DNA MER1_type 73 132 -2285 1839 163 0 7 chr20 53377829 53378130 -13289875 + AluJo SINE Alu 3 301 -11 493 198 97 87 chr20 53378130 53378275 -13289730 + Charlie8 DNA MER1_type 132 281 -2136 306 241 46 11 chr20 53378295 53378382 -13289623 + L2 LINE L2 3182 3271 -1 187 320 53 50 chr20 53378611 53378914 -13289091 + L2 LINE L2 2811 3114 -158 328 224 169 80 chr20 53379063 53379300 -13288705 + L2 LINE L2 3014 3271 -42 792 128 0 0 chr20 53379301 53379410 -13288595 + AluJ SINE Alu 2 110 -202 697 54 0 0 chr20 53379410 53379538 -13288467 - AluY SINE Alu 0 319 192 1126 150 5 61 chr20 53379539 53379752 -13288253 + AluJb SINE Alu 102 302 -10 207 256 0 0 chr20 53379752 53379791 -13288214 + L2 LINE L2 3257 3295 -18 2195 88 3 3 chr20 53379795 53380091 -13287914 - AluSp SINE Alu -17 296 1 740 155 9 0 chr20 53380121 53380237 -13287768 - FLAM_C SINE Alu -25 118 2 382 297 83 7 chr20 53380264 53380409 -13287596 - MIR SINE MIR -98 164 9 761 248 69 25 chr20 53380745 53380982 -13287023 - MIR SINE MIR 0 262 5 470 264 5 83 chr20 53381122 53381315 -13286690 - MIR SINE MIR -32 230 53 209 239 141 0 chr20 53381382 53381453 -13286552 + MIR SINE MIR 180 260 -2 365 228 22 11 chr20 53381599 53381691 -13286314 - MIR3 SINE MIR -7 201 109 1099 186 52 14 chr20 53383126 53383336 -13284669 + Charlie1 DNA MER1_type 10 227 -2534 619 142 58 0 chr20 53383343 53383463 -13284542 + Charlie1 DNA MER1_type 2635 2761 0 27 62 0 0 chr20 53385608 53385656 -13282349 + GC_rich Low_complexity Low_complexity 1 48 0 286 244 218 0 chr20 53386431 53386509 -13281496 - MIR3 SINE MIR -23 185 91 2272 86 0 13 chr20 53386893 53387206 -13280799 + AluSq SINE Alu 3 311 -2 1616 159 58 0 chr20 53388108 53388263 -13279742 - AluJb SINE Alu -20 292 147 270 0 0 0 chr20 53388263 53388293 -13279712 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1616 159 58 0 chr20 53388293 53388413 -13279592 - AluJb SINE Alu -165 147 1 747 188 0 0 chr20 53388440 53388568 -13279437 - FLAM_C SINE Alu -9 134 7 2169 100 0 7 chr20 53388621 53388920 -13279085 + AluSx SINE Alu 1 297 -15 2188 114 3 0 chr20 53390443 53390751 -13277254 - AluSg SINE Alu -1 309 1 408 277 200 0 chr20 53392271 53392401 -13275604 + MIR SINE MIR 97 252 -10 539 193 167 0 chr20 53392560 53392674 -13275331 - FLAM_C SINE Alu 0 133 1 1963 107 32 0 chr20 53392918 53393198 -13274807 + AluSx SINE Alu 1 289 -23 27 29 0 0 chr20 53394480 53394514 -13273491 + AT_rich Low_complexity Low_complexity 1 34 0 363 296 171 35 chr20 53394546 53394708 -13273297 + L2 LINE L2 2710 2849 -464 2213 98 7 7 chr20 53394708 53395014 -13272991 - AluSx SINE Alu -6 306 1 363 296 171 35 chr20 53395014 53395172 -13272833 + L2 LINE L2 2849 3086 -227 2028 49 49 35 chr20 53395311 53395599 -13272406 - AluY SINE Alu -19 292 1 189 0 0 0 chr20 53395809 53395830 -13272175 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1762 124 34 0 chr20 53395831 53396097 -13271908 - AluSx SINE Alu -37 275 1 1981 128 0 0 chr20 53396105 53396419 -13271586 - AluSx SINE Alu 0 314 1 227 338 35 63 chr20 53396831 53396973 -13271032 - MER5B DNA MER1_type -36 142 5 2244 60 0 3 chr20 53397380 53397663 -13270342 + AluY SINE Alu 21 302 -9 490 282 184 45 chr20 53397674 53397856 -13270149 + L2 LINE L2 2402 2557 -756 2123 102 3 0 chr20 53397856 53398161 -13269844 - AluSp SINE Alu -1 312 7 490 282 184 45 chr20 53398161 53398386 -13269619 + L2 LINE L2 2557 2749 -564 216 0 0 0 chr20 53398386 53398410 -13269595 + (TCCC)n Simple_repeat Simple_repeat 2 25 0 490 282 184 45 chr20 53398410 53398811 -13269194 + L2 LINE L2 2749 3307 -6 2011 89 64 0 chr20 53398901 53399181 -13268824 + AluSx SINE Alu 1 298 -14 1499 184 10 27 chr20 53399266 53399560 -13268445 - AluJo SINE Alu -23 289 1 295 242 16 0 chr20 53399610 53399672 -13268333 + MER58 DNA MER1_type 2358 2420 0 387 149 0 0 chr20 53401192 53401266 -13266739 + (T)n Simple_repeat Simple_repeat 1 74 0 383 251 123 66 chr20 53401608 53401811 -13266194 + Charlie8 DNA MER1_type 200 421 -1996 1981 110 0 17 chr20 53401811 53402103 -13265902 + AluSx SINE Alu 2 288 -24 383 251 123 66 chr20 53402103 53402142 -13265863 + Charlie8 DNA MER1_type 421 456 -1961 1021 199 76 34 chr20 53402313 53402575 -13265430 - AluJo SINE Alu -39 273 1 767 169 8 0 chr20 53402645 53402775 -13265230 + FLAM_C SINE Alu 1 131 -2 2236 85 0 0 chr20 53402815 53403110 -13264895 + AluY SINE Alu 1 295 -16 1978 152 33 0 chr20 53404697 53405013 -13262992 - AluJo SINE Alu 0 326 1 2486 63 30 0 chr20 53405097 53405397 -13262608 - AluY SINE Alu 0 311 3 1808 103 95 8 chr20 53405477 53405739 -13262266 - AluSx SINE Alu -13 299 15 2232 113 0 10 chr20 53407910 53408210 -13259795 + AluSg SINE Alu 1 297 -13 2495 45 0 35 chr20 53408535 53408847 -13259158 - AluY SINE Alu -10 301 1 2498 40 0 23 chr20 53409403 53409702 -13258303 + AluY SINE Alu 2 293 -18 501 254 48 0 chr20 53410172 53410298 -13257707 + MER94 DNA DNA 2 133 -1 1657 224 119 47 chr20 53410608 53411115 -13256890 - L1MC4 LINE L1 -2 8040 7480 2232 104 10 7 chr20 53411115 53411412 -13256593 + AluSx SINE Alu 1 298 -14 1657 224 119 47 chr20 53411412 53411517 -13256488 - L1MC4 LINE L1 -562 7480 7384 22 0 0 0 chr20 53411540 53411562 -13256443 + AT_rich Low_complexity Low_complexity 1 22 0 2010 129 3 17 chr20 53411562 53411857 -13256148 + AluJo SINE Alu 2 292 -20 2231 131 0 3 chr20 53411901 53412213 -13255792 + AluSx SINE Alu 1 311 -1 764 191 7 7 chr20 53412618 53412770 -13255235 + MER3 DNA MER1_type 47 198 -11 229 193 18 53 chr20 53412728 53412785 -13255220 - MER3 DNA MER1_type -108 101 47 * 753 283 129 14 chr20 53412791 53413103 -13254902 - MLT1K LTR MaLR -162 426 68 2364 109 0 0 chr20 53413103 53413407 -13254598 + AluSq SINE Alu 1 304 -9 753 283 129 14 chr20 53413407 53413444 -13254561 - MLT1K LTR MaLR -520 68 37 1425 157 79 0 chr20 53413484 53413713 -13254292 - AluJo SINE Alu -14 298 52 1557 139 54 19 chr20 53413946 53414204 -13253801 + AluJo SINE Alu 46 312 0 316 235 201 13 chr20 53414347 53414496 -13253509 - MER102b DNA MER1_type -2 339 163 2449 86 0 3 chr20 53414501 53414803 -13253202 - AluSq SINE Alu -12 301 1 2435 75 0 7 chr20 53414834 53415139 -13252866 - AluSc SINE Alu -6 303 1 908 181 17 28 chr20 53415958 53416135 -13251870 - AluJo SINE Alu -18 294 120 2142 139 3 3 chr20 53416157 53416458 -13251547 - AluJo SINE Alu -11 301 1 270 0 0 0 chr20 53416505 53416535 -13251470 + (CA)n Simple_repeat Simple_repeat 2 31 0 2127 135 6 6 chr20 53417054 53417366 -13250639 - AluSx SINE Alu 0 312 1 1303 161 80 52 chr20 53417368 53417527 -13250478 - AluJb SINE Alu -18 294 122 2314 110 3 0 chr20 53417527 53417826 -13250179 - AluSx SINE Alu -12 300 1 1303 161 80 52 chr20 53417826 53417952 -13250053 - AluJb SINE Alu -190 122 1 1339 81 0 0 chr20 53418233 53418394 -13249611 + AluSg/x SINE Alu 128 288 -22 2252 91 0 23 chr20 53418645 53418818 -13249187 - AluSg1 SINE Alu -8 301 137 2319 104 7 3 chr20 53418818 53419117 -13248888 - AluSq SINE Alu -13 300 1 2252 91 0 23 chr20 53419117 53419251 -13248754 - AluSg1 SINE Alu -172 137 1 596 247 111 57 chr20 53419511 53419880 -13248125 - L1ME4a LINE L1 -224 5897 5509 375 23 0 0 chr20 53419896 53419940 -13248065 + (TTA)n Simple_repeat Simple_repeat 2 45 0 1611 172 27 0 chr20 53419961 53420222 -13247783 - AluJb SINE Alu -43 269 2 464 222 10 0 chr20 53420224 53420323 -13247682 - L1MD3 LINE L1 -164 7831 7732 241 169 169 36 chr20 53420327 53420410 -13247595 - L1MC/D LINE L1 -1984 5824 5731 2139 119 16 0 chr20 53420413 53420716 -13247289 - AluSp SINE Alu -5 308 1 327 65 0 0 chr20 53421068 53421114 -13246891 + (TC)n Simple_repeat Simple_repeat 1 46 0 237 33 0 0 chr20 53421137 53421167 -13246838 + (CA)n Simple_repeat Simple_repeat 1 30 0 249 313 88 12 chr20 53421222 53421382 -13246623 + L1P5 LINE L1 5259 5430 -721 566 198 207 26 chr20 53421887 53421957 -13246048 + ORSL DNA AcHobo 1 57 -218 1384 146 3 140 chr20 53421957 53422135 -13245870 + AluJo SINE Alu 1 111 -191 2542 54 3 0 chr20 53422135 53422430 -13245575 + AluSp SINE Alu 1 296 -17 1384 146 3 140 chr20 53422430 53422593 -13245412 + AluJo SINE Alu 111 295 -7 566 198 207 26 chr20 53422593 53422749 -13245256 + ORSL DNA AcHobo 57 268 -7 644 171 0 9 chr20 53423804 53423909 -13244096 - FLAM_A SINE Alu -37 105 2 2215 109 0 0 chr20 53424250 53424563 -13243442 - AluSx SINE Alu 0 313 1 2420 95 3 0 chr20 53424934 53425230 -13242775 + AluSp SINE Alu 1 297 -16 475 100 14 0 chr20 53425830 53425900 -13242105 + AluJo/FLAM SINE Alu 58 128 -184 1808 108 116 0 chr20 53425900 53426151 -13241854 - AluSx SINE Alu -19 293 14 370 286 192 5 chr20 53426195 53426419 -13241586 - L2 LINE L2 -81 3232 2967 918 259 92 13 chr20 53426454 53426693 -13241312 - L1MC/D LINE L1 -2128 5680 5461 1990 146 4 0 chr20 53426693 53426974 -13241031 + AluSx SINE Alu 11 292 -20 918 259 92 13 chr20 53426974 53427038 -13240967 - L1MC/D LINE L1 -2347 5461 5403 2300 105 3 3 chr20 53427038 53427351 -13240654 - AluSq SINE Alu 0 313 1 918 259 92 13 chr20 53427351 53427362 -13240643 - L1MC/D LINE L1 -2405 5403 5340 2321 93 0 0 chr20 53427445 53427735 -13240270 - AluSg SINE Alu -16 294 5 2336 92 3 3 chr20 53427772 53428065 -13239940 - AluSc SINE Alu -16 293 1 486 198 63 24 chr20 53428235 53428361 -13239644 - L1ME1 LINE L1 -5 6161 6031 1218 174 43 43 chr20 53428406 53428635 -13239370 - AluJo SINE Alu -20 292 61 2477 89 0 3 chr20 53428635 53428939 -13239066 - AluSq SINE Alu -9 304 2 1218 174 43 43 chr20 53428939 53428985 -13239020 - AluJo SINE Alu -250 62 17 308 313 61 37 chr20 53428991 53429205 -13238800 - L1MC/D LINE L1 -1029 5117 4899 444 196 35 96 chr20 53429303 53429429 -13238576 - L1MC4 LINE L1 -1339 6983 1982 238 147 29 0 chr20 53429436 53429504 -13238501 + (TA)n Simple_repeat Simple_repeat 1 70 0 302 224 15 15 chr20 53429504 53429522 -13238483 - L1MC4 LINE L1 -4352 2074 2057 182 61 0 30 chr20 53429522 53429555 -13238450 + (TA)n Simple_repeat Simple_repeat 2 33 0 302 224 15 15 chr20 53429555 53429603 -13238402 - L1MC4 LINE L1 -4368 2058 2008 * 324 221 0 96 chr20 53429594 53429698 -13238307 - L1MC4 LINE L1 -1337 6705 6612 251 83 0 21 chr20 53429698 53429746 -13238259 + (TA)n Simple_repeat Simple_repeat 1 47 0 2023 136 0 7 chr20 53429751 53430037 -13237968 - AluSx SINE Alu -24 288 5 1414 204 136 44 chr20 53430111 53430568 -13237437 - MLT1D LTR MaLR -4 501 3 1002 158 11 33 chr20 53430579 53430752 -13237253 - AluJo SINE Alu -10 302 132 2013 130 10 17 chr20 53430752 53431082 -13236923 - AluSx SINE Alu 0 312 1 479 357 116 3 chr20 53431280 53431574 -13236431 - L1M4 LINE L1 -2661 3485 3159 912 67 0 0 chr20 53431579 53431699 -13236306 + (TTCC)n Simple_repeat Simple_repeat 4 123 0 1209 109 11 35 chr20 53431700 53431858 -13236147 - AluSc SINE Alu -20 289 134 2730 38 0 10 chr20 53431858 53432172 -13235833 - AluYa5 SINE Alu 0 311 1 1209 109 11 35 chr20 53432172 53432187 -13235818 - AluSc SINE Alu -175 134 120 610 323 159 20 chr20 53432194 53432286 -13235719 - L1M4 LINE L1 -3000 3146 3068 2463 77 3 3 chr20 53432286 53432597 -13235408 - AluY SINE Alu 0 311 1 610 323 159 20 chr20 53432597 53432752 -13235253 - L1M4 LINE L1 -3078 3068 2936 1949 147 3 13 chr20 53432752 53433058 -13234947 + AluJb SINE Alu 1 303 -9 610 323 159 20 chr20 53433058 53433218 -13234787 - L1M4 LINE L1 -3210 2936 2681 252 100 40 0 chr20 53433569 53433619 -13234386 - AluSq SINE Alu 0 302 251 * 338 82 0 20 chr20 53433614 53433663 -13234342 + AluJ/FLAM SINE Alu 11 58 -244 2057 101 0 0 chr20 53433664 53433921 -13234084 - AluSq SINE Alu -56 257 1 397 295 63 67 chr20 53433922 53434207 -13233798 - L1 LINE L1 -1563 4583 4300 2120 128 14 0 chr20 53434395 53434692 -13233313 + AluSq SINE Alu 2 302 -11 1303 109 0 0 chr20 53434692 53434857 -13233148 + AluSg/x SINE Alu 132 296 -14 1537 156 77 21 chr20 53434857 53435197 -13232808 + L1MB8 LINE L1 5819 6177 -1 192 333 39 26 chr20 53435236 53435314 -13232691 - L2 LINE L2 -48 3265 3187 636 138 0 0 chr20 53435355 53435442 -13232563 - AluJ/FLAM SINE Alu -224 88 2 212 128 43 21 chr20 53435501 53435548 -13232457 - MER5A DNA MER1_type -114 75 28 664 179 81 0 chr20 53435571 53435694 -13232311 - FLAM_A SINE Alu 0 133 1 1959 156 20 0 chr20 53435933 53436234 -13231771 - AluSg SINE Alu -3 307 1 1377 171 46 66 chr20 53436236 53436540 -13231465 - AluJo SINE Alu -14 298 1 2267 179 138 66 chr20 53436605 53436671 -13231334 - MLT1E1 LTR MaLR 0 654 594 2521 89 0 9 chr20 53436671 53436986 -13231019 + AluSq SINE Alu 1 312 -1 2267 179 138 66 chr20 53436986 53437358 -13230647 - MLT1E1 LTR MaLR -60 594 157 2142 134 6 13 chr20 53437358 53437672 -13230333 - AluJb SINE Alu 0 312 1 2267 179 138 66 chr20 53437672 53437842 -13230163 - MLT1E1 LTR MaLR -497 157 1 270 273 219 0 chr20 53437969 53438097 -13229908 - L3 LINE CR1 -257 1320 1165 760 179 0 0 chr20 53438136 53438253 -13229752 - AluJb SINE Alu -194 118 2 2344 130 19 64 chr20 53438310 53438484 -13229521 - MER57A LTR ERV1 0 403 223 2414 103 0 3 chr20 53438484 53438794 -13229211 + AluSx SINE Alu 1 309 -3 2344 130 19 64 chr20 53438794 53438938 -13229067 - MER57A LTR ERV1 -180 223 106 2213 116 3 0 chr20 53438938 53439240 -13228765 - AluSx SINE Alu -5 307 5 2344 130 19 64 chr20 53439240 53439342 -13228663 - MER57A LTR ERV1 -297 106 1 955 228 46 54 chr20 53439441 53439520 -13228485 - MIR SINE MIR -3 259 181 2171 125 0 26 chr20 53439520 53439833 -13228172 - AluSx SINE Alu -7 305 1 955 228 46 54 chr20 53439833 53440012 -13227993 - MIR SINE MIR -81 181 3 257 340 95 29 chr20 53440078 53440319 -13227686 - L3 LINE CR1 -552 1025 769 1627 161 27 20 chr20 53440441 53440733 -13227272 + AluJb SINE Alu 1 294 -18 2171 126 10 10 chr20 53440733 53441043 -13226962 + AluSx SINE Alu 1 310 -2 491 152 36 0 chr20 53441078 53441190 -13226815 + GA-rich Low_complexity Low_complexity 1 116 0 1741 143 33 4 chr20 53441212 53441484 -13226521 + AluJb SINE Alu 1 280 -32 361 204 10 10 chr20 53441498 53441596 -13226409 + GA-rich Low_complexity Low_complexity 3 100 0 908 129 8 0 chr20 53441620 53441752 -13226253 + AluSq/x SINE Alu 1 133 -180 740 272 129 14 chr20 53442011 53442298 -13225707 + MER46C DNA MER2_type 9 328 -10 1727 150 0 4 chr20 53442777 53443031 -13224974 - AluJb SINE Alu -13 299 47 2374 88 0 0 chr20 53443056 53443352 -13224653 - AluSq SINE Alu -17 296 1 2132 130 0 7 chr20 53443405 53443704 -13224301 - AluSx SINE Alu -15 297 1 692 124 106 0 chr20 53443800 53443913 -13224092 - FLAM_C SINE Alu -10 133 9 459 184 11 0 chr20 53443954 53444041 -13223964 + MIR SINE MIR 156 243 -19 710 214 0 39 chr20 53444116 53444270 -13223735 + MER5B DNA MER1_type 26 173 -5 408 285 19 53 chr20 53444859 53445025 -13222980 - MER5A DNA MER1_type -2 187 7 196 311 104 28 chr20 53445077 53445183 -13222822 - MER5A DNA MER1_type -29 160 47 1893 139 3 23 chr20 53445215 53445524 -13222481 - AluJb SINE Alu -4 308 6 21 0 0 0 chr20 53445532 53445553 -13222452 + AT_rich Low_complexity Low_complexity 1 21 0 1725 107 0 45 chr20 53445641 53445731 -13222274 + AluSx SINE Alu 56 149 -163 2372 75 17 0 chr20 53445731 53446023 -13221982 + AluSq SINE Alu 1 297 -16 1725 107 0 45 chr20 53446023 53446176 -13221829 + AluSx SINE Alu 149 288 -24 2203 131 0 6 chr20 53446200 53446514 -13221491 + AluSx SINE Alu 1 312 0 1042 178 0 40 chr20 53447260 53447462 -13220543 - AluJo SINE Alu -31 281 88 2227 83 0 43 chr20 53447524 53447850 -13220155 + AluSx SINE Alu 1 312 0 651 253 19 6 chr20 53448216 53448374 -13219631 - MER5B DNA MER1_type -1 177 18 403 271 118 71 chr20 53448434 53448604 -13219401 - MER5B DNA MER1_type 0 178 1 682 130 26 97 chr20 53449692 53449846 -13218159 + AluJb SINE Alu 148 290 -22 2192 72 54 4 chr20 53449854 53450133 -13217872 + AluSq SINE Alu 2 294 -19 195 42 0 0 chr20 53450150 53450174 -13217831 + (TA)n Simple_repeat Simple_repeat 2 25 0 324 0 0 0 chr20 53450206 53450242 -13217763 + (TA)n Simple_repeat Simple_repeat 2 37 0 2515 75 0 3 chr20 53450242 53450547 -13217458 - AluSc SINE Alu -5 304 1 1877 163 7 23 chr20 53450584 53450891 -13217114 - AluJo SINE Alu -10 302 1 897 154 0 29 chr20 53450973 53451148 -13216857 + L1MB7 LINE L1 5996 6165 -19 788 168 0 8 chr20 53451167 53451292 -13216713 + AluJb SINE Alu 2 125 -187 27 73 0 0 chr20 53451295 53451350 -13216655 + AT_rich Low_complexity Low_complexity 1 55 0 784 170 24 164 chr20 53451368 53451422 -13216583 - MER33 DNA MER1_type -2262 323 263 2453 78 3 0 chr20 53451422 53451718 -13216287 - AluSp SINE Alu -16 297 1 784 170 24 164 chr20 53451718 53451767 -13216238 - MER33 DNA MER1_type -2322 263 209 2287 127 0 0 chr20 53451767 53452074 -13215931 + AluSx SINE Alu 1 307 -5 784 170 24 164 chr20 53452074 53452145 -13215860 - MER33 DNA MER1_type -2376 209 130 856 123 0 36 chr20 53452145 53452283 -13215722 + FLAM_C SINE Alu 1 133 0 784 170 24 164 chr20 53452283 53452477 -13215528 - MER33 DNA MER1_type -2455 130 5 1845 157 34 3 chr20 53453527 53453821 -13214184 + AluJb SINE Alu 1 303 -9 453 297 122 13 chr20 53453934 53454163 -13213842 - L2 LINE L2 -209 3063 2810 2337 100 7 3 chr20 53454313 53454614 -13213391 - AluSx SINE Alu -9 303 2 549 266 37 11 chr20 53454617 53454805 -13213200 + Charlie8 DNA MER1_type 312 504 -1913 2206 116 3 3 chr20 53454898 53455200 -13212805 + AluSq SINE Alu 1 302 -11 941 120 0 0 chr20 53455269 53455394 -13212611 - FLAM_C SINE Alu -8 125 1 1035 158 13 0 chr20 53455811 53455969 -13212036 + FRAM SINE Alu 5 164 -12 224 215 76 0 chr20 53455983 53456062 -13211943 - L2 LINE L2 -626 2688 2604 2307 109 0 7 chr20 53456343 53456647 -13211358 + AluSx SINE Alu 1 302 -10 2073 138 3 0 chr20 53456653 53456944 -13211061 + AluSx SINE Alu 1 292 -20 184 241 19 0 chr20 53457254 53457308 -13210697 - MER5B DNA MER1_type -3 175 121 353 165 0 44 chr20 53457314 53457574 -13210431 + AluJo SINE Alu 1 301 -1 419 226 20 10 chr20 53457581 53457683 -13210322 - MER5B DNA MER1_type -49 129 27 258 296 23 0 chr20 53457671 53457759 -13210246 - L2 LINE L2 -569 2745 2656 * 2438 92 0 0 chr20 53457797 53458092 -13209913 - AluSq SINE Alu -18 295 1 685 324 44 0 chr20 53458095 53458367 -13209638 - L1MC4a LINE L1 -1923 5885 5602 255 214 0 0 chr20 53458368 53458410 -13209595 - 5S rRNA rRNA -79 42 1 1064 173 93 13 chr20 53458829 53459066 -13208939 - L1MB8 LINE L1 0 6178 5923 763 270 83 16 chr20 53459084 53459336 -13208669 + Charlie8 DNA MER1_type 8 276 -2141 2239 110 0 7 chr20 53459454 53459745 -13208260 + AluSx SINE Alu 9 297 -15 206 257 61 73 chr20 53459953 53460092 -13207913 - MIR SINE MIR -61 147 20 243 288 96 0 chr20 53460176 53460249 -13207756 - MLT1H LTR MaLR 0 567 488 315 248 51 16 chr20 53460260 53460399 -13207606 - MLT1H LTR MaLR -167 375 245 22 35 0 0 chr20 53460431 53460460 -13207545 + AT_rich Low_complexity Low_complexity 1 29 0 1175 62 0 57 chr20 53460460 53460616 -13207389 - L1MA1 LINE L1 0 6302 6156 2441 107 0 0 chr20 53460616 53460925 -13207080 - AluSx SINE Alu -3 309 1 1175 62 0 57 chr20 53460925 53460945 -13207060 - L1MA1 LINE L1 -146 6156 6136 2054 141 3 3 chr20 53460947 53461245 -13206760 - AluJb SINE Alu -12 300 3 5523 140 38 30 chr20 53461261 53461653 -13206352 - L1PB1 LINE L1 0 6151 5764 2528 51 0 19 chr20 53461653 53461965 -13206040 - AluY SINE Alu -5 306 1 5523 140 38 30 chr20 53461965 53462951 -13205054 - L1PB1 LINE L1 -387 5764 4738 2290 122 3 0 chr20 53462951 53463262 -13204743 - AluSq SINE Alu -1 312 1 5523 140 38 30 chr20 53463262 53463896 -13204109 - L1PB1 LINE L1 -1413 4738 4111 358 131 0 0 chr20 53463879 53463940 -13204065 - L1MA1 LINE L1 -157 6145 6085 * 619 278 34 20 chr20 53463940 53464194 -13203811 - MLT1H LTR MaLR -281 268 10 640 263 142 55 chr20 53464194 53464329 -13203676 - L2 LINE L2 -28 3285 3163 2498 73 0 10 chr20 53464329 53464643 -13203362 - AluY SINE Alu 0 311 1 640 263 142 55 chr20 53464643 53464888 -13203117 - L2 LINE L2 -150 3163 2872 1139 140 35 0 chr20 53464960 53465131 -13202874 + AluJo SINE Alu 119 295 -17 2652 195 52 73 chr20 53465131 53465385 -13202620 - L1MB7 LINE L1 -20 6164 5906 2152 134 0 0 chr20 53465385 53465676 -13202329 - AluSx SINE Alu -21 291 1 2652 195 52 73 chr20 53465676 53465882 -13202123 - L1MB7 LINE L1 -278 5906 5697 2430 82 0 7 chr20 53465882 53466187 -13201818 - AluY SINE Alu -8 303 1 2170 115 0 20 chr20 53466187 53466491 -13201514 - AluSx SINE Alu -12 300 3 2652 195 52 73 chr20 53466491 53466557 -13201448 - L1MB7 LINE L1 -486 5698 5632 2001 159 0 9 chr20 53466557 53466872 -13201133 - AluJo SINE Alu 0 312 1 2652 195 52 73 chr20 53466872 53467080 -13200925 - L1MB7 LINE L1 -552 5632 5443 837 264 20 30 chr20 53467129 53467424 -13200581 - L2 LINE L2 -640 2674 2383 225 0 0 0 chr20 53467428 53467453 -13200552 + (T)n Simple_repeat Simple_repeat 1 25 0 1464 189 46 11 chr20 53468051 53468336 -13199669 - AluJb SINE Alu -17 295 1 845 245 0 0 chr20 53468364 53468548 -13199457 + MIR SINE MIR 31 214 -48 889 111 0 44 chr20 53468583 53468718 -13199287 + FLAM_C SINE Alu 5 133 -10 2273 117 3 0 chr20 53469779 53470079 -13197926 - AluSx SINE Alu -11 301 1 589 264 117 0 chr20 53470187 53470384 -13197621 + MER102a DNA MER1_type 71 290 -40 1631 146 114 29 chr20 53470405 53470546 -13197459 - AluJb SINE Alu -7 305 177 2421 85 7 3 chr20 53470546 53470852 -13197153 - AluSc SINE Alu 0 309 3 1631 146 114 29 chr20 53470852 53470991 -13197014 - AluJb SINE Alu -135 177 1 438 171 24 0 chr20 53471086 53471168 -13196837 - MER53 DNA DNA 0 189 106 355 179 21 63 chr20 53471098 53471193 -13196812 + MER53 DNA DNA 23 113 -76 * 1958 83 4 0 chr20 53471226 53471467 -13196538 - AluSx SINE Alu -22 290 49 464 271 13 40 chr20 53471546 53471697 -13196308 + MIR SINE MIR 14 160 -102 233 75 25 0 chr20 53472186 53472226 -13195779 + (TC)n Simple_repeat Simple_repeat 1 41 0 2422 111 0 0 chr20 53472654 53472961 -13195044 + AluSx SINE Alu 1 307 -5 223 113 32 32 chr20 53473518 53473580 -13194425 + CT-rich Low_complexity Low_complexity 1 62 0 2117 112 27 14 chr20 53473606 53473900 -13194105 - AluSx SINE Alu -14 298 1 198 327 73 28 chr20 53474061 53474309 -13193696 - L2 LINE L2 -167 3105 2847 645 276 105 64 chr20 53474593 53475049 -13192956 + Charlie8 DNA MER1_type 3 479 -1938 248 295 3 0 chr20 53475642 53475726 -13192279 + MIR SINE MIR 66 144 -64 762 248 253 35 chr20 53475727 53476182 -13191823 - MLT1H1 LTR MaLR -1 554 1 1680 199 17 65 chr20 53476238 53476390 -13191615 + L1ME3 LINE L1 5448 5606 -558 2245 89 31 3 chr20 53476390 53476681 -13191324 - AluSx SINE Alu -13 299 1 1680 199 17 65 chr20 53476681 53476812 -13191193 + L1ME3 LINE L1 5606 5742 -422 2301 99 0 26 chr20 53476812 53477114 -13190891 + AluSx SINE Alu 2 295 -17 1680 199 17 65 chr20 53477114 53477292 -13190713 + L1ME3 LINE L1 5742 5888 -276 805 169 0 0 chr20 53477293 53477411 -13190594 + FLAM_C SINE Alu 1 118 -25 1060 214 60 14 chr20 53477428 53477709 -13190296 + L1ME3 LINE L1 5868 6161 -1 39 0 0 0 chr20 53477728 53477767 -13190238 + AT_rich Low_complexity Low_complexity 1 39 0 638 172 6 124 chr20 53478485 53478654 -13189351 - Charlie8 DNA MER1_type -2181 236 88 426 250 0 52 chr20 53478763 53478899 -13189106 + MIR SINE MIR 48 176 -86 842 162 7 15 chr20 53478999 53479135 -13188870 - AluJo SINE Alu -177 135 1 2262 118 3 0 chr20 53479348 53479653 -13188352 + AluSx SINE Alu 1 306 -6 275 250 165 45 chr20 53480024 53480224 -13187781 - MER102b DNA MER1_type -15 326 103 397 107 13 27 chr20 53480237 53480312 -13187693 - L1MC3 LINE L1 -13 7772 7699 386 118 15 15 chr20 53480328 53480396 -13187609 - AluJo SINE Alu -168 134 67 1742 201 60 58 chr20 53480399 53480443 -13187562 - L1MD3 LINE L1 -102 7893 7851 1832 170 23 0 chr20 53480443 53480743 -13187262 + AluJb SINE Alu 1 307 -5 1742 201 60 58 chr20 53480743 53480761 -13187244 - L1MD3 LINE L1 -144 7851 7835 210 37 0 0 chr20 53480761 53480788 -13187217 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1742 201 60 58 chr20 53480788 53481226 -13186779 - L1MD3 LINE L1 -160 7835 7391 897 213 99 12 chr20 53481222 53481475 -13186530 - L1MC3 LINE L1 -752 7033 6759 * 2142 124 0 3 chr20 53481483 53481781 -13186224 - AluSx SINE Alu -15 297 1 208 348 36 0 chr20 53481812 53481924 -13186081 - MIR SINE MIR -128 134 19 23 0 0 0 chr20 53482224 53482247 -13185758 + AT_rich Low_complexity Low_complexity 1 23 0 2151 125 3 0 chr20 53482251 53482547 -13185458 + AluSx SINE Alu 1 297 -15 321 257 10 10 chr20 53482550 53482651 -13185354 - MLT1E LTR MaLR -492 101 1 353 302 54 7 chr20 53482665 53482851 -13185154 - MIR3 SINE MIR -62 200 8 2487 89 0 0 chr20 53482994 53483296 -13184709 - AluSx SINE Alu -10 302 1 2189 137 0 0 chr20 53484321 53484620 -13183385 + AluJb SINE Alu 1 299 -13 454 210 30 0 chr20 53484620 53484720 -13183285 + Charlie8 DNA MER1_type 79 181 -2236 304 295 71 0 chr20 53484748 53484860 -13183145 - L1ME3 LINE L1 -11 6151 6032 1989 124 57 0 chr20 53484900 53485182 -13182823 + AluSx SINE Alu 1 298 -14 308 169 52 0 chr20 53485182 53485259 -13182746 + Charlie8 DNA MER1_type 195 275 -2142 358 180 0 0 chr20 53485883 53485944 -13182061 - MLT1D LTR MaLR -2 503 443 237 191 0 0 chr20 53485945 53485987 -13182018 + MER57A LTR ERV1 296 337 -66 2189 117 0 0 chr20 53486017 53486307 -13181698 - AluSx SINE Alu -18 294 5 1997 172 69 37 chr20 53486311 53486747 -13181258 - MLT1D LTR MaLR -55 450 1 822 162 113 43 chr20 53487146 53487331 -13180674 - MER20 DNA MER1_type -3 216 19 339 273 149 0 chr20 53487335 53487456 -13180549 + MIR SINE MIR 18 156 -106 298 95 0 95 chr20 53487958 53487972 -13180033 - FLAM SINE Alu -171 131 117 207 0 0 0 chr20 53487972 53487995 -13180010 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 298 95 0 95 chr20 53487995 53488043 -13179962 - FLAM SINE Alu -185 117 75 2467 89 3 0 chr20 53488043 53488347 -13179658 - AluSx SINE Alu -6 306 2 2381 220 39 9 chr20 53488354 53488917 -13179088 - L1MB7 LINE L1 -54 6130 5551 282 217 0 14 chr20 53488921 53488990 -13179015 - L1M4 LINE L1 -582 5602 5535 2435 77 0 3 chr20 53488999 53489297 -13178708 - AluSc SINE Alu -12 297 1 270 261 101 94 chr20 53489368 53489655 -13178350 + Charlie8 DNA MER1_type 148 436 -1981 186 43 0 0 chr20 53489662 53489685 -13178320 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 2271 89 0 0 chr20 53489689 53489969 -13178036 - AluSg SINE Alu -30 280 1 215 278 56 93 chr20 53490095 53490203 -13177802 + MIR SINE MIR 89 192 -70 1714 158 66 4 chr20 53490488 53490761 -13177244 - AluJo SINE Alu -22 290 1 696 306 19 0 chr20 53490761 53490967 -13177038 - MIR SINE MIR 0 262 53 690 122 19 0 chr20 53491062 53491169 -13176836 + FLAM_C SINE Alu 3 111 -32 339 113 0 0 chr20 53491723 53491776 -13176229 + (CA)n Simple_repeat Simple_repeat 2 54 0 231 114 0 0 chr20 53491887 53491922 -13176083 + (TTCA)n Simple_repeat Simple_repeat 4 38 0 965 111 0 0 chr20 53492186 53492312 -13175693 + AluSq/x SINE Alu 6 131 -181 2209 132 3 0 chr20 53492319 53492622 -13175383 + AluSx SINE Alu 4 307 -5 448 277 6 45 chr20 53493217 53493263 -13174742 - MIR SINE MIR -52 210 164 2009 141 3 17 chr20 53493263 53493561 -13174444 - AluSx SINE Alu -18 294 1 448 277 6 45 chr20 53493561 53493691 -13174314 - MIR SINE MIR -98 164 41 1649 151 0 8 chr20 53493691 53493930 -13174075 - AluJo SINE Alu -75 237 1 41 58 0 0 chr20 53493937 53494006 -13173999 + AT_rich Low_complexity Low_complexity 1 69 0 2361 95 0 0 chr20 53494584 53494879 -13173126 - AluSq SINE Alu -14 299 5 370 245 0 20 chr20 53495189 53495287 -13172718 + MIR SINE MIR 60 155 -107 229 270 176 0 chr20 53495860 53495934 -13172071 - L2 LINE L2 -18 3254 3168 269 241 11 69 chr20 53496158 53496173 -13171832 - MIR3 SINE MIR -41 167 153 2366 101 0 3 chr20 53496173 53496471 -13171534 - AluSx SINE Alu -15 297 1 269 241 11 69 chr20 53496471 53496542 -13171463 - MIR3 SINE MIR -55 153 86 1884 167 17 0 chr20 53496722 53497010 -13170995 - AluJo SINE Alu -19 293 1 533 319 0 6 chr20 53497010 53497173 -13170832 - MIR SINE MIR -15 247 86 1894 152 3 17 chr20 53497615 53497911 -13170094 + AluJb SINE Alu 1 292 -20 1673 185 54 14 chr20 53497921 53498218 -13169787 + AluJo SINE Alu 1 309 -3 297 282 34 26 chr20 53498309 53498426 -13169579 - MIR SINE MIR -60 202 85 553 272 63 6 chr20 53498841 53498999 -13169006 - MIR SINE MIR -80 182 16 255 237 0 0 chr20 53500042 53500101 -13167904 + MIR SINE MIR 65 123 -139 463 180 180 0 chr20 53500106 53500206 -13167799 + FLAM_C SINE Alu 2 119 -14 299 253 23 23 chr20 53500271 53500358 -13167647 + L2 LINE L2 2748 2834 -480 2526 72 7 0 chr20 53500361 53500667 -13167338 - AluSx SINE Alu -4 308 1 1888 116 0 0 chr20 53500896 53501138 -13166867 - AluSx SINE Alu -68 244 3 674 163 141 0 chr20 53501247 53501382 -13166623 - MIR SINE MIR -32 230 77 1924 139 23 10 chr20 53501518 53501820 -13166185 + AluJb SINE Alu 5 310 -2 1128 157 0 17 chr20 53501860 53502038 -13165967 + FRAM SINE Alu 1 172 -4 459 314 55 5 chr20 53502052 53502341 -13165664 - L2 LINE L2 -253 3060 2757 973 96 15 22 chr20 53503599 53503734 -13164271 + AluJo SINE Alu 1 134 -178 553 255 120 10 chr20 53503923 53504115 -13163890 - MIR SINE MIR -2 260 48 191 146 62 42 chr20 53504136 53504184 -13163821 + L2 LINE L2 3133 3181 -91 180 80 0 0 chr20 53504552 53504577 -13163428 + L2 LINE L2 3271 3295 -18 323 291 62 50 chr20 53505476 53505734 -13162271 + L2 LINE L2 2931 3191 -81 212 344 49 16 chr20 53505799 53505921 -13162084 - MIR SINE MIR -51 211 86 189 0 0 0 chr20 53506120 53506141 -13161864 + (TG)n Simple_repeat Simple_repeat 2 22 0 1970 150 27 0 chr20 53506141 53506435 -13161570 - AluSq SINE Alu -11 302 1 2241 121 16 0 chr20 53506888 53507193 -13160812 - AluSx SINE Alu -2 310 1 320 265 12 0 chr20 53507362 53507445 -13160560 - MER20 DNA MER1_type -3 216 133 637 196 88 0 chr20 53507621 53507769 -13160236 - MER20 DNA MER1_type -58 161 1 233 314 14 0 chr20 53507780 53507850 -13160155 + L1MC5 LINE L1 7833 7903 -58 261 272 19 58 chr20 53507911 53508014 -13159991 + MIR SINE MIR 19 117 -145 308 300 92 31 chr20 53508165 53508392 -13159613 - MIR SINE MIR -14 248 8 211 184 26 0 chr20 53508412 53508450 -13159555 + L2 LINE L2 3211 3249 -23 300 242 16 70 chr20 53508999 53509185 -13158820 + (TCTCTG)n Simple_repeat Simple_repeat 2 177 0 230 175 0 0 chr20 53510552 53510592 -13157413 - L2 LINE L2 -11 3302 3263 2366 90 3 0 chr20 53510885 53511184 -13156821 - AluSp SINE Alu -13 300 1 587 143 113 8 chr20 53511194 53511327 -13156678 - MIR SINE MIR -46 216 70 180 0 0 0 chr20 53511859 53511879 -13156126 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 1293 148 30 48 chr20 53511887 53512073 -13155932 + MER2 DNA MER2_type 1 182 -163 2283 118 0 0 chr20 53512073 53512377 -13155628 + AluSx SINE Alu 1 304 -8 1293 148 30 48 chr20 53512377 53512461 -13155544 + MER2 DNA MER2_type 182 266 -79 1413 102 19 42 chr20 53512463 53512679 -13155326 - AluJo SINE Alu 0 312 102 198 0 0 0 chr20 53512679 53512701 -13155304 + (TTA)n Simple_repeat Simple_repeat 2 23 0 1740 131 10 38 chr20 53512704 53512995 -13155010 - AluJo SINE Alu -29 283 1 412 149 15 0 chr20 53513002 53513069 -13154936 + MER2 DNA MER2_type 278 345 0 184 268 82 38 chr20 53513356 53513539 -13154466 - L2 LINE L2 -591 2723 2533 1688 251 53 22 chr20 53513548 53513611 -13154394 - L1MD2 LINE L1 -8 6351 6291 1814 164 17 3 chr20 53513611 53513898 -13154107 + AluJo SINE Alu 1 291 -21 1688 251 53 22 chr20 53513898 53514344 -13153661 - L1MD2 LINE L1 -68 6291 5826 2243 114 10 0 chr20 53514347 53514654 -13153351 + AluSx SINE Alu 1 310 -2 832 104 0 0 chr20 53514661 53514767 -13153238 + AluJb SINE Alu 196 301 -11 242 103 26 0 chr20 53514768 53514807 -13153198 - L2 LINE L2 -771 2543 2504 216 355 26 0 chr20 53514941 53515017 -13152988 - L2 LINE L2 -23 3290 3213 1538 152 4 40 chr20 53515551 53515877 -13152128 - AluJo SINE Alu 0 356 41 220 292 56 0 chr20 53515878 53515967 -13152038 + CT-rich Low_complexity Low_complexity 4 97 0 2113 128 34 0 chr20 53516586 53516882 -13151123 - AluSx SINE Alu -5 307 2 2338 120 0 0 chr20 53517002 53517311 -13150694 - AluSx SINE Alu -3 309 1 372 271 49 0 chr20 53517893 53518015 -13149990 - MER45A DNA AcHobo -28 150 23 257 302 23 12 chr20 53518046 53518132 -13149873 + MIR SINE MIR 93 179 -83 1993 101 8 15 chr20 53518193 53518461 -13149544 - AluSx SINE Alu -11 301 36 2404 101 3 0 chr20 53518565 53518872 -13149133 + AluSx SINE Alu 1 308 -4 249 302 43 55 chr20 53519788 53519950 -13148055 + MIR SINE MIR 32 192 -63 464 298 209 0 chr20 53520138 53520373 -13147632 - Charlie8 DNA MER1_type -2133 284 1 412 306 57 6 chr20 53520502 53520659 -13147346 + MIR SINE MIR 23 187 -75 1898 179 87 94 chr20 53520797 53521096 -13146909 - L1MC3 LINE L1 -25 7760 7465 1781 136 0 103 chr20 53521096 53521385 -13146620 - AluJo SINE Alu -8 304 53 2267 123 0 0 chr20 53521385 53521686 -13146319 + AluSx SINE Alu 1 301 -11 1781 136 0 103 chr20 53521686 53521735 -13146270 - AluJo SINE Alu -259 53 1 1898 179 87 94 chr20 53521735 53521999 -13146006 - L1MC3 LINE L1 -320 7465 7201 260 200 46 31 chr20 53522002 53522067 -13145938 - MLT1F1 LTR MaLR -434 133 68 1765 154 14 11 chr20 53522175 53522455 -13145550 - AluJo SINE Alu -11 301 21 223 264 14 42 chr20 53522489 53522561 -13145444 + MIR SINE MIR 39 108 -154 465 275 42 12 chr20 53522650 53522817 -13145188 - MLT1J LTR MaLR -92 419 248 217 196 18 18 chr20 53522836 53522892 -13145113 - MIR SINE MIR -113 149 94 1028 174 23 46 chr20 53523455 53523496 -13144509 + MER58A DNA MER1_type 9 49 -2371 2522 95 0 0 chr20 53523496 53523802 -13144203 - AluSx SINE Alu -6 306 1 1028 174 23 46 chr20 53523802 53523978 -13144027 + MER58A DNA MER1_type 49 221 -3 559 266 49 15 chr20 53524339 53524542 -13143463 - Charlie8 DNA MER1_type -2205 212 3 596 272 51 25 chr20 53525268 53525503 -13142502 - MLT1K LTR MaLR -4 584 344 276 312 83 63 chr20 53525544 53525731 -13142274 - MLT1K LTR MaLR -328 260 78 2302 98 3 16 chr20 53525731 53526038 -13141967 + AluSx SINE Alu 1 303 -9 2581 77 0 3 chr20 53526042 53526354 -13141651 + AluY SINE Alu 1 311 0 276 312 83 63 chr20 53526354 53526414 -13141591 - MLT1K LTR MaLR -512 76 3 282 343 126 11 chr20 53526609 53526784 -13141221 - L3 LINE CR1 -1156 421 227 314 238 59 141 chr20 53528051 53528371 -13139634 + L2 LINE L2 2938 3231 -41 469 259 24 12 chr20 53528814 53528984 -13139021 + MER5B DNA MER1_type 3 174 -4 2103 111 0 54 chr20 53529236 53529551 -13138454 + AluSx SINE Alu 1 298 -14 2099 138 3 0 chr20 53529704 53530002 -13138003 - AluSx SINE Alu -11 301 3 32 0 0 0 chr20 53530445 53530477 -13137528 + AT_rich Low_complexity Low_complexity 1 32 0 731 169 0 0 chr20 53530477 53530595 -13137410 - FLAM_C SINE Alu -23 120 3 746 203 14 0 chr20 53531332 53531475 -13136530 + AluJb SINE Alu 138 282 -30 1914 157 20 23 chr20 53531537 53531843 -13136162 + AluJb SINE Alu 1 305 -7 2314 121 0 0 chr20 53531916 53532223 -13135782 - AluSx SINE Alu -5 307 1 1564 143 34 45 chr20 53532253 53532519 -13135486 - AluJo SINE Alu -15 297 35 600 259 68 79 chr20 53532536 53532903 -13135102 - L1ME3A LINE L1 -10 6160 5798 2342 115 0 0 chr20 53532988 53533292 -13134713 + AluSx SINE Alu 1 304 -8 240 304 70 18 chr20 53533490 53533661 -13134344 + MIR SINE MIR 17 196 -66 784 141 0 30 chr20 53534238 53534373 -13133632 - FLAM_C SINE Alu -2 131 1 1811 174 14 0 chr20 53534705 53534999 -13133006 + AluJo SINE Alu 1 298 -14 541 267 151 23 chr20 53535259 53535418 -13132587 + L1MC4a LINE L1 5314 5451 -2357 2199 132 3 0 chr20 53535418 53535714 -13132291 - AluSx SINE Alu -15 297 1 541 267 151 23 chr20 53535714 53535812 -13132193 + L1MC4a LINE L1 5451 5604 -2204 872 140 0 29 chr20 53535812 53535948 -13132057 + AluJb SINE Alu 163 294 -18 682 291 118 7 chr20 53535971 53536260 -13131745 + L1MC4a LINE L1 5612 5932 -1876 329 273 0 0 chr20 53536563 53536640 -13131365 + Charlie8 DNA MER1_type 2338 2414 -3 1208 189 80 10 chr20 53536875 53537176 -13130829 + L1M4 LINE L1 3660 3981 -2165 461 233 17 67 chr20 53538185 53538305 -13129700 + MER5B DNA MER1_type 64 177 -1 236 268 18 0 chr20 53538499 53538555 -13129450 + MLT1L LTR MaLR 112 168 -447 2304 103 0 13 chr20 53539126 53539427 -13128578 - AluSp SINE Alu -16 297 1 367 273 93 17 chr20 53539429 53539601 -13128404 - MER113 DNA MER1_type? -206 315 131 914 122 27 20 chr20 53539617 53539764 -13128241 + AluJb SINE Alu 141 288 -24 2447 80 7 0 chr20 53540692 53540991 -13127014 - AluSq SINE Alu -12 301 1 2040 115 0 51 chr20 53541831 53542145 -13125860 + AluY SINE Alu 5 302 -9 303 28 0 0 chr20 53543885 53543921 -13124084 + (A)n Simple_repeat Simple_repeat 1 36 0 2173 86 10 10 chr20 53548366 53548657 -13119348 + AluSq SINE Alu 1 291 -22 14754 118 84 29 chr20 53548913 53549315 -13118690 - Tigger3b DNA MER2_type -1797 1232 854 1527 165 75 0 chr20 53549315 53549581 -13118424 - AluJo SINE Alu -26 286 1 14754 118 84 29 chr20 53549581 53549696 -13118309 - Tigger3b DNA MER2_type -2175 854 747 2131 135 0 0 chr20 53549696 53549993 -13118012 + AluSx SINE Alu 1 297 -15 14754 118 84 29 chr20 53549993 53550091 -13117914 - Tigger3b DNA MER2_type -2282 747 656 1563 105 130 8 chr20 53550091 53550329 -13117676 + AluSg1 SINE Alu 29 295 -14 14754 118 84 29 chr20 53550329 53550693 -13117312 - Tigger3b DNA MER2_type -2373 656 1806 2248 83 13 20 chr20 53550693 53550994 -13117011 - AluSq SINE Alu -14 299 1 14754 118 84 29 chr20 53550994 53552659 -13115346 - Tigger3b DNA MER2_type -1222 1807 236 385 221 74 11 chr20 53552659 53552754 -13115251 + Tigger3b DNA MER2_type 2 102 -1129 985 177 55 6 chr20 53552764 53552945 -13115060 - MER8 DNA MER2_type 0 239 50 2202 90 10 51 chr20 53552951 53553263 -13114742 - AluSq SINE Alu -14 299 1 3636 156 76 67 chr20 53553273 53554202 -13113803 + Tigger3b DNA MER2_type 292 1229 -2 1008 162 129 5 chr20 53554203 53554413 -13113592 - Tigger3b DNA MER2_type -995 236 1 234 0 0 0 chr20 53555075 53555101 -13112904 + (A)n Simple_repeat Simple_repeat 1 26 0 528 274 9 8 chr20 53556806 53556933 -13111072 - L2 LINE L2 -5 3267 3138 342 261 106 64 chr20 53557246 53557434 -13110571 + MIR SINE MIR 50 245 -17 1482 179 0 78 chr20 53557958 53558266 -13109739 - AluJb SINE Alu -23 289 6 306 0 0 0 chr20 53558607 53558641 -13109364 + (CAAAAA)n Simple_repeat Simple_repeat 3 36 0 2210 91 7 3 chr20 53559686 53559982 -13108023 + AluSc SINE Alu 3 299 -10 2142 49 46 52 chr20 53560717 53561023 -13106982 - AluY SINE Alu -6 305 2 2249 108 0 3 chr20 53561024 53561320 -13106685 - AluSq SINE Alu -18 295 1 1462 158 17 65 chr20 53561359 53561651 -13106354 - AluJo SINE Alu -34 278 1 198 71 0 0 chr20 53561893 53561921 -13106084 + (T)n Simple_repeat Simple_repeat 1 28 0 2485 70 0 3 chr20 53562246 53562545 -13105460 + AluY SINE Alu 1 298 -13 22 0 0 0 chr20 53562821 53562843 -13105162 + AT_rich Low_complexity Low_complexity 1 22 0 2134 99 33 7 chr20 53562843 53563147 -13104858 + AluSp SINE Alu 2 313 0 218 275 88 12 chr20 53563263 53563343 -13104662 - L2 LINE L2 -1 3271 3186 349 250 153 45 chr20 53563630 53563806 -13104199 + MLT1K LTR MaLR 387 581 -7 243 255 0 0 chr20 53564105 53564152 -13103853 + AluJ/monomer SINE Alu 5 51 -248 845 183 0 0 chr20 53564206 53564348 -13103657 + FRAM SINE Alu 13 154 -22 1605 184 14 17 chr20 53564419 53564707 -13103298 - AluJb SINE Alu -25 287 1 1066 190 91 15 chr20 53564950 53565213 -13102792 - L1 LINE L1 -973 5173 4891 278 79 26 0 chr20 53565212 53565250 -13102755 + L1PB4 LINE L1 6046 6084 -72 * 491 57 29 0 chr20 53565250 53565320 -13102685 - AluSp/q SINE Alu -2 311 240 2006 107 43 11 chr20 53565922 53566203 -13101802 - AluSx SINE Alu -22 290 1 2147 121 10 7 chr20 53566727 53567034 -13100971 + AluSx SINE Alu 5 312 0 21 0 0 0 chr20 53569849 53569870 -13098135 + AT_rich Low_complexity Low_complexity 1 21 0 535 311 223 6 chr20 53569975 53570447 -13097558 - L3 LINE CR1 -54 1523 950 23 0 0 0 chr20 53570454 53570477 -13097528 + AT_rich Low_complexity Low_complexity 1 23 0 1638 201 49 8 chr20 53571474 53571864 -13096141 + L1MB2 LINE L1 5657 6054 -117 260 96 96 0 chr20 53571857 53571909 -13096096 + L1MB3 LINE L1 6125 6181 -2 * 1046 171 101 62 chr20 53572947 53573204 -13094801 + AluJo SINE Alu 12 278 -34 352 266 32 0 chr20 53573204 53573298 -13094707 + L2 LINE L2 3217 3313 0 2216 95 51 0 chr20 53573750 53574045 -13093960 + AluSg SINE Alu 1 310 0 1764 103 95 0 chr20 53574060 53574323 -13093682 + AluSx SINE Alu 9 296 -16 454 277 71 33 chr20 53574693 53574877 -13093128 + MIR SINE MIR 30 220 -42 2495 151 139 32 chr20 53575862 53576332 -13091673 - MER21A LTR ERV1 -6 925 398 2096 125 0 13 chr20 53576332 53576635 -13091370 - AluSg SINE Alu -11 299 1 2495 151 139 32 chr20 53576635 53576661 -13091344 - MER21A LTR ERV1 -533 398 376 1204 183 69 16 chr20 53576675 53576921 -13091084 - MER21A LTR ERV1 -672 259 1 2294 107 0 0 chr20 53577267 53577567 -13090438 - AluSx SINE Alu -8 304 5 252 0 0 0 chr20 53579017 53579045 -13088960 + (CA)n Simple_repeat Simple_repeat 2 29 0 1946 137 10 0 chr20 53579572 53579879 -13088126 + AluSx SINE Alu 1 310 -2 190 235 12 141 chr20 53581001 53581086 -13086919 - L3 LINE CR1 -1 1576 1503 987 118 0 15 chr20 53581314 53581449 -13086556 - FLAM_C SINE Alu 0 133 1 461 281 195 66 chr20 53584137 53585128 -13082877 - L1M2 LINE L1 -5442 1407 542 306 280 138 77 chr20 53585440 53585751 -13082254 + L1M2 LINE L1 671 1000 -5849 1578 172 55 14 chr20 53587446 53587736 -13080269 - AluJo SINE Alu -10 302 1 24 32 0 0 chr20 53588714 53588745 -13079260 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr20 53590797 53590818 -13077187 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr20 53591157 53591185 -13076820 + AT_rich Low_complexity Low_complexity 1 28 0 970 167 33 0 chr20 53591371 53591521 -13076484 - AluJ SINE Alu -24 288 134 201 39 0 0 chr20 53591572 53591598 -13076407 + (TTA)n Simple_repeat Simple_repeat 2 27 0 784 173 0 23 chr20 53591598 53591731 -13076274 - AluJ SINE Alu -181 131 2 2430 52 17 0 chr20 53592142 53592433 -13075572 - AluY SINE Alu -15 296 1 2389 73 3 7 chr20 53592451 53592753 -13075252 + AluSp SINE Alu 1 301 -12 1585 126 159 4 chr20 53593112 53593383 -13074622 - AluYb8 SINE Alu -5 313 1 1895 120 25 4 chr20 53593383 53593658 -13074347 - AluSx SINE Alu -22 290 9 351 0 0 0 chr20 53593840 53593879 -13074126 + (TG)n Simple_repeat Simple_repeat 2 40 0 735 116 107 0 chr20 53594861 53594973 -13073032 + AluJb SINE Alu 2 125 -187 653 140 0 38 chr20 53594982 53595168 -13072837 + (TA)n Simple_repeat Simple_repeat 2 180 0 1306 170 26 4 chr20 53595184 53595414 -13072591 + AluSx SINE Alu 1 235 -77 2316 82 7 3 chr20 53595979 53596273 -13071732 + AluSg1 SINE Alu 1 295 -14 836 208 0 0 chr20 53596273 53596422 -13071583 + AluJb SINE Alu 134 282 -30 2017 132 10 0 chr20 53596649 53596938 -13071067 + AluSx SINE Alu 1 292 -20 2185 83 4 4 chr20 53597108 53597411 -13070594 - AluSc SINE Alu 0 303 1 2565 47 0 3 chr20 53597494 53597793 -13070212 - AluY SINE Alu -13 298 1 306 301 42 83 chr20 53597801 53598113 -13069892 - L1MC/D LINE L1 -2203 5605 5307 219 256 235 43 chr20 53598211 53598441 -13069564 - L2 LINE L2 -339 2975 2702 260 306 159 20 chr20 53598645 53598897 -13069108 - L1MC/D LINE L1 -2082 4064 3778 374 0 22 0 chr20 53599031 53599077 -13068928 + (TG)n Simple_repeat Simple_repeat 2 48 0 1305 192 0 42 chr20 53599099 53599360 -13068645 - AluJo SINE Alu -25 287 38 410 319 128 3 chr20 53599976 53600289 -13067716 + L2 LINE L2 2188 2539 -775 1936 138 7 17 chr20 53600543 53600680 -13067325 + AluSx SINE Alu 1 138 -174 2317 85 3 0 chr20 53600680 53600975 -13067030 + AluSp SINE Alu 1 296 -17 1936 138 7 17 chr20 53600975 53601133 -13066872 + AluSx SINE Alu 138 293 -19 1993 121 0 0 chr20 53601416 53601680 -13066325 - AluSc SINE Alu -45 264 1 1223 273 110 11 chr20 53601752 53602224 -13065781 + LTR33A LTR ERVL 5 523 0 2271 96 0 0 chr20 53602620 53602912 -13065093 - AluSg SINE Alu -18 292 1 1067 208 100 38 chr20 53603552 53604020 -13063985 - L1 LINE L1 -3832 3733 3236 2073 126 3 3 chr20 53604340 53604654 -13063351 + AluSx SINE Alu 1 314 0 1603 147 93 0 chr20 53604675 53604975 -13063030 - MER44D DNA MER2_type -8 601 4 2005 119 3 3 chr20 53605260 53605572 -13062433 + AluSx SINE Alu 1 312 0 373 304 22 0 chr20 53605771 53605863 -13062142 + MIR SINE MIR 2 95 -167 239 208 38 0 chr20 53606079 53606132 -13061873 - L1ME4a LINE L1 -194 5927 5873 284 349 8 8 chr20 53606136 53606265 -13061740 - L1ME4a LINE L1 -503 5618 5490 811 200 188 31 chr20 53606580 53606827 -13061178 + L1MA9 LINE L1 6036 6312 0 882 213 37 42 chr20 53608007 53608223 -13059782 + MER20 DNA MER1_type 1 215 -4 2176 91 24 0 chr20 53609329 53609616 -13058389 - AluY SINE Alu -17 294 1 743 68 0 3 chr20 53610075 53610309 -13057696 + AluY SINE Alu 1 311 0 365 247 71 46 chr20 53611016 53611183 -13056822 + L1ME LINE L1 5503 5676 -445 232 234 143 52 chr20 53611213 53611290 -13056715 - L2 LINE L2 -26 3246 3163 2463 72 0 0 chr20 53614499 53614791 -13053214 - AluSg SINE Alu -14 296 5 461 325 37 0 chr20 53616075 53616266 -13051739 - LTR67 LTR ERVL -357 200 3 2126 132 0 13 chr20 53616292 53616602 -13051403 - AluSx SINE Alu -5 307 2 1565 203 0 30 chr20 53616679 53616980 -13051025 - AluJo SINE Alu -20 292 1 564 309 208 16 chr20 53617007 53617488 -13050517 - L2 LINE L2 -5 3308 2731 238 300 17 0 chr20 53617503 53617563 -13050442 - MIR SINE MIR -200 62 2 1825 103 29 0 chr20 53617780 53618023 -13049982 + AluSp SINE Alu 47 296 -17 370 120 53 53 chr20 53618176 53618251 -13049754 - AluSg/x SINE Alu -9 293 219 709 265 144 57 chr20 53618488 53618994 -13049011 - L2 LINE L2 -5 3308 2847 2357 106 0 3 chr20 53618994 53619297 -13048708 + AluSx SINE Alu 1 302 -10 709 265 144 57 chr20 53619297 53619436 -13048569 - L2 LINE L2 -466 2847 2721 1783 163 68 113 chr20 53619436 53619734 -13048271 - MLT1D LTR MaLR 0 505 240 2528 85 0 0 chr20 53619734 53620041 -13047964 - AluSx SINE Alu -5 307 1 1783 163 68 113 chr20 53620041 53620271 -13047734 - MLT1D LTR MaLR -265 240 1 709 265 144 57 chr20 53620271 53620459 -13047546 - L2 LINE L2 -592 2721 2386 376 249 32 90 chr20 53620810 53620855 -13047150 - L1ME3A LINE L1 -5 6165 6119 903 133 0 37 chr20 53620855 53620990 -13047015 + FLAM_C SINE Alu 1 130 -3 376 249 32 90 chr20 53620990 53621133 -13046872 - L1ME3A LINE L1 -51 6119 5988 233 235 165 35 chr20 53621758 53621843 -13046162 - L2 LINE L2 -9 3304 3209 285 208 192 32 chr20 53621947 53622072 -13045933 - MLT1D LTR MaLR -2 503 359 448 198 59 0 chr20 53622109 53622210 -13045795 - MER45 DNA AcHobo -71 107 1 960 146 11 27 chr20 53622229 53622414 -13045591 + MER20 DNA MER1_type 38 219 0 282 266 0 0 chr20 53622512 53622576 -13045429 - L2 LINE L2 -262 3051 2988 489 41 10 186 chr20 53622732 53622789 -13045216 - MADE1 DNA Mariner 0 80 45 2098 124 0 3 chr20 53622789 53623115 -13044890 + AluSx SINE Alu 1 312 0 489 41 10 186 chr20 53623115 53623154 -13044851 - MADE1 DNA Mariner -35 45 1 1699 124 0 0 chr20 53623493 53623718 -13044287 - AluSq SINE Alu -21 292 68 1018 103 55 0 chr20 53623718 53623863 -13044142 - AluSx SINE Alu -159 153 1 344 259 82 0 chr20 53623864 53623949 -13044056 + MER5B DNA MER1_type 36 127 -51 1845 149 7 24 chr20 53623954 53624250 -13043755 - AluJo SINE Alu -9 303 13 739 203 16 36 chr20 53624309 53624501 -13043504 - MER53 DNA DNA -1 188 1 2098 122 3 14 chr20 53625106 53625400 -13042605 - AluSq SINE Alu -22 291 1 863 235 5 10 chr20 53625894 53626090 -13041915 - MER58A DNA MER1_type 0 224 30 2415 60 0 3 chr20 53626155 53626468 -13041537 + AluY SINE Alu 1 312 0 1830 178 7 0 chr20 53626468 53626755 -13041250 - AluJb SINE Alu -23 289 1 971 209 28 131 chr20 53627413 53627451 -13040554 - L1MC5 LINE L1 -208 7753 7713 2345 100 0 3 chr20 53627451 53627750 -13040255 - AluSq SINE Alu -15 298 1 971 209 28 131 chr20 53627750 53627780 -13040225 - L1MC5 LINE L1 -248 7713 7682 1744 183 10 10 chr20 53627780 53628081 -13039924 + AluJo SINE Alu 4 304 -8 971 209 28 131 chr20 53628081 53628128 -13039877 - L1MC5 LINE L1 -279 7682 7632 1782 154 32 0 chr20 53628128 53628413 -13039592 - AluJb SINE Alu -18 294 1 971 209 28 131 chr20 53628413 53628792 -13039213 - L1MC5 LINE L1 -329 7632 7308 433 171 23 23 chr20 53628794 53628882 -13039123 - FLAM_A SINE Alu -15 127 40 274 244 58 23 chr20 53628884 53628970 -13039035 + MER69 DNA AcHobo 2434 2522 -4 2163 145 0 0 chr20 53628981 53629284 -13038721 - AluSq SINE Alu -10 303 1 186 352 29 9 chr20 53629284 53629389 -13038616 + L2 LINE L2 881 987 -2327 361 299 179 29 chr20 53629474 53629825 -13038180 + L2 LINE L2 857 1260 -2054 357 216 7 108 chr20 53629941 53630080 -13037925 - MLT1K LTR MaLR -386 202 78 2285 196 30 61 chr20 53630081 53630167 -13037838 - MER74A LTR ERVL 0 558 471 2323 91 0 7 chr20 53630167 53630464 -13037541 + AluSx SINE Alu 2 296 -16 1532 165 26 19 chr20 53630470 53630736 -13037269 + AluJo SINE Alu 45 312 0 2285 196 30 61 chr20 53630736 53631218 -13036787 - MER74A LTR ERVL -92 466 1 475 230 15 44 chr20 53632269 53632404 -13035601 + L2 LINE L2 2352 2482 -832 593 164 9 0 chr20 53632404 53632520 -13035485 + CT-rich Low_complexity Low_complexity 1 117 0 2134 102 0 4 chr20 53632528 53632802 -13035203 - AluSx SINE Alu -39 273 1 426 251 111 18 chr20 53632802 53632966 -13035039 + L2 LINE L2 2467 2649 -665 1106 214 61 0 chr20 53633061 53633117 -13034888 + AluJo SINE Alu 62 113 -199 423 0 0 0 chr20 53633117 53633164 -13034841 + (CA)n Simple_repeat Simple_repeat 2 48 0 1106 214 61 0 chr20 53633164 53633336 -13034669 + AluJo SINE Alu 113 304 -8 372 272 185 28 chr20 53633338 53633589 -13034416 + L2 LINE L2 2739 2949 -364 756 162 7 37 chr20 53633589 53633725 -13034280 - FLAM_C SINE Alu -1 132 1 372 272 185 28 chr20 53633725 53633851 -13034154 + L2 LINE L2 2949 3175 -138 234 164 182 0 chr20 53634363 53634418 -13033587 + MIR SINE MIR 82 146 -62 317 316 119 37 chr20 53634424 53634890 -13033115 - L2 LINE L2 -1 3271 2765 762 246 47 19 chr20 53635608 53635823 -13032182 - MIR SINE MIR -21 241 21 474 239 28 0 chr20 53636435 53636544 -13031461 + MIR3 SINE MIR 94 205 -3 3632 152 29 52 chr20 53636676 53637411 -13030594 + L1MB2 LINE L1 5452 6169 -2 1271 91 34 6 chr20 53637412 53637588 -13030417 - AluSq SINE Alu -15 298 118 1154 78 21 0 chr20 53637724 53637865 -13030140 - AluSq/x SINE Alu -168 145 2 808 158 105 20 chr20 53637882 53638034 -13029971 - AluJo SINE Alu -22 290 126 251 226 13 123 chr20 53638697 53638752 -13029253 - L1MC/D LINE L1 -1896 5912 5853 2262 102 0 20 chr20 53638752 53639055 -13028950 - AluSx SINE Alu -15 297 1 251 226 13 123 chr20 53639055 53639154 -13028851 - L1MC/D LINE L1 -1955 5853 5775 318 192 0 27 chr20 53639183 53639256 -13028749 - Charlie4 DNA MER1_type -3 1958 1888 2349 105 3 0 chr20 53639260 53639566 -13028439 - AluSx SINE Alu -5 307 1 24 32 0 0 chr20 53639566 53639597 -13028408 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr20 53639598 53639619 -13028386 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2204 68 0 11 chr20 53639619 53639883 -13028122 - AluSc SINE Alu -45 264 4 1690 156 46 11 chr20 53639887 53640170 -13027835 - AluJo SINE Alu -18 294 2 268 200 0 43 chr20 53640176 53640246 -13027759 - Charlie4 DNA MER1_type -76 1885 1819 591 260 172 22 chr20 53640300 53640619 -13027386 - L1MC/D LINE L1 -2073 5735 5369 277 267 116 71 chr20 53640831 53641056 -13026949 - L2 LINE L2 -110 3203 2969 2239 103 40 0 chr20 53641110 53641410 -13026595 - AluSx SINE Alu 0 312 1 189 0 0 0 chr20 53641869 53641890 -13026115 + (T)n Simple_repeat Simple_repeat 1 21 0 2466 88 3 0 chr20 53642220 53642527 -13025478 - AluSp SINE Alu -5 308 1 334 183 0 42 chr20 53642527 53642598 -13025407 - MIR SINE MIR -97 165 98 333 284 23 0 chr20 53642872 53642960 -13025045 + MER5B DNA MER1_type 89 178 0 1338 149 79 4 chr20 53643408 53643636 -13024369 - AluJb SINE Alu -4 308 64 963 207 6 0 chr20 53643637 53643811 -13024194 - MER41D LTR ERV1 0 557 383 1222 33 11 33 chr20 53643813 53643996 -13024009 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 2389 90 3 0 chr20 53644013 53644313 -13023692 - AluY SINE Alu -10 301 1 986 79 71 0 chr20 53644313 53644439 -13023566 - AluSq/x SINE Alu -178 135 1 2159 171 11 0 chr20 53644439 53644814 -13023191 - MER41D LTR ERV1 -178 379 1 489 123 0 0 chr20 53644814 53644879 -13023126 - AluJb SINE Alu -246 66 2 310 186 302 0 chr20 53644981 53645067 -13022938 + MER81 DNA DNA 3 114 0 241 204 252 58 chr20 53645137 53645231 -13022774 - MER5A DNA MER1_type -6 183 66 2368 82 0 29 chr20 53645231 53645547 -13022458 - AluY SINE Alu -4 307 1 921 120 23 0 chr20 53645578 53645711 -13022294 - AluJb SINE Alu -176 136 1 311 211 21 0 chr20 53645711 53645781 -13022224 - MER5A DNA MER1_type -115 74 4 273 203 145 0 chr20 53646468 53646537 -13021468 + MIR SINE MIR 84 162 -100 346 186 249 93 chr20 53646540 53646777 -13021228 + LTR33 LTR ERVL 4 277 -244 580 219 27 27 chr20 53646806 53646952 -13021053 + LTR41 LTR ERVL 1 146 -627 708 251 68 82 chr20 53647000 53647367 -13020638 + MLT1K LTR MaLR 156 517 -71 642 245 92 0 chr20 53647512 53647696 -13020309 - MIR SINE MIR -29 233 33 735 297 29 13 chr20 53648076 53648315 -13019690 - MIR SINE MIR 0 262 20 459 269 18 36 chr20 53648687 53648854 -13019151 - MLT1K LTR MaLR -27 561 398 1110 238 78 50 chr20 53648914 53649313 -13018692 - MLT1J LTR MaLR -101 410 1 1981 134 10 3 chr20 53649520 53649818 -13018187 - AluJb SINE Alu -4 308 9 349 254 0 103 chr20 53649940 53650066 -13017939 - MER81 DNA DNA 0 114 2 377 221 49 41 chr20 53650092 53650214 -13017791 - MLT1L LTR MaLR -89 526 404 746 211 49 36 chr20 53650365 53650612 -13017393 - LTR16A1 LTR ERVL -61 396 147 366 254 29 51 chr20 53650774 53650912 -13017093 - MLT1L LTR MaLR -333 282 148 1058 254 105 51 chr20 53652152 53652201 -13015804 - L2 LINE L2 -104 3209 3164 2239 99 3 16 chr20 53652201 53652513 -13015492 - AluSg SINE Alu -2 308 1 1058 254 105 51 chr20 53652513 53652586 -13015419 - L2 LINE L2 -149 3164 3096 2886 181 33 11 chr20 53652586 53653132 -13014873 - MER74A LTR ERVL 0 558 1 1058 254 105 51 chr20 53653132 53653693 -13014312 - L2 LINE L2 -217 3096 2467 191 363 109 42 chr20 53653775 53653968 -13014037 + L2 LINE L2 3049 3254 -18 326 309 172 25 chr20 53654060 53654345 -13013660 + L2 LINE L2 2920 3246 -67 634 221 0 0 chr20 53654540 53654685 -13013320 + MER96B DNA MER1_type? 249 393 -24 602 143 30 0 chr20 53655760 53655893 -13012112 + GA-rich Low_complexity Low_complexity 1 137 0 796 211 7 0 chr20 53655985 53656137 -13011868 - FAM SINE Alu -10 175 23 494 283 249 8 chr20 53656151 53656512 -13011493 - L2 LINE L2 -3 3310 2863 190 191 127 32 chr20 53657353 53657416 -13010589 + L2 LINE L2 1614 1682 -1632 842 261 200 16 chr20 53658693 53659187 -13008818 + L2 LINE L2 2174 2758 -556 232 229 198 10 chr20 53659846 53659942 -13008063 + L2 LINE L2 3145 3258 -14 2304 73 4 0 chr20 53660312 53660585 -13007420 - AluSp SINE Alu -39 274 1 637 229 73 24 chr20 53660585 53660790 -13007215 - MIR SINE MIR -36 226 12 717 175 0 8 chr20 53660822 53660942 -13007063 + FLAM_A SINE Alu 1 119 -14 2228 131 0 0 chr20 53660942 53661239 -13006766 - AluSx SINE Alu -15 297 1 22 56 0 0 chr20 53661239 53661275 -13006730 + AT_rich Low_complexity Low_complexity 1 36 0 477 153 0 0 chr20 53661428 53661500 -13006505 + AluSg/x SINE Alu 181 252 -58 630 170 0 0 chr20 53661505 53661617 -13006388 + FLAM_C SINE Alu 24 135 -8 295 194 42 28 chr20 53661732 53661804 -13006201 + MIR SINE MIR 184 256 -6 1956 155 3 10 chr20 53662090 53662386 -13005619 - AluJb SINE Alu -18 294 1 360 273 39 39 chr20 53662387 53662541 -13005464 - Charlie8 DNA MER1_type -2249 168 15 519 249 106 94 chr20 53663015 53663260 -13004745 - L2 LINE L2 0 3272 3025 895 203 83 83 chr20 53664200 53664366 -13003639 + MLT1A2 LTR MaLR 1 166 -208 2412 80 0 0 chr20 53664366 53664690 -13003315 + AluSx SINE Alu 1 324 0 895 203 83 83 chr20 53664690 53664894 -13003111 + MLT1A2 LTR MaLR 165 374 0 247 284 0 14 chr20 53664964 53665038 -13002967 - L2 LINE L2 -54 3259 3187 23 33 0 0 chr20 53665073 53665103 -13002902 + AT_rich Low_complexity Low_complexity 1 30 0 948 213 50 5 chr20 53665146 53665348 -13002657 + MER20 DNA MER1_type 6 216 -3 602 272 25 7 chr20 53665352 53665551 -13002454 + MIR SINE MIR 12 258 0 2148 119 14 0 chr20 53665551 53665846 -13002159 - AluSx SINE Alu -13 299 1 289 278 0 35 chr20 53665853 53665968 -13002037 + MER113 DNA MER1_type? 126 236 -285 380 317 48 60 chr20 53666002 53666251 -13001754 + L2 LINE L2 3009 3254 -18 696 191 115 102 chr20 53666448 53666683 -13001322 + MER102b DNA MER1_type 103 340 -1 2221 101 0 0 chr20 53666775 53667085 -13000920 + AluSc SINE Alu 1 310 0 615 332 130 2 chr20 53668316 53668762 -12999243 - L2 LINE L2 0 3313 2811 269 309 91 28 chr20 53668846 53669098 -12998907 - L2 LINE L2 -656 2658 2391 1913 179 45 67 chr20 53669389 53669897 -12998108 + MLT1D LTR MaLR 1 497 -8 2198 123 0 0 chr20 53669908 53670201 -12997804 + AluSx SINE Alu 1 293 -19 551 311 77 10 chr20 53670294 53670503 -12997502 + MIR SINE MIR 24 246 -16 267 364 8 0 chr20 53670630 53670751 -12997254 + L1MC/D LINE L1 5531 5652 -2156 331 140 0 0 chr20 53670788 53670838 -12997167 + LTR16C LTR ERVL 427 476 -15 233 275 75 33 chr20 53671354 53671474 -12996531 - MER5A DNA MER1_type -26 163 39 255 250 69 0 chr20 53672021 53672093 -12995912 + MIR SINE MIR 108 184 -78 443 254 122 25 chr20 53672382 53672583 -12995422 - MIR SINE MIR -25 237 18 573 160 113 53 chr20 53672895 53672983 -12995022 + MLT1D LTR MaLR 347 450 -55 1711 180 14 7 chr20 53672983 53673290 -12994715 + AluJo SINE Alu 1 309 0 573 160 113 53 chr20 53673290 53673350 -12994655 + MLT1D LTR MaLR 450 505 0 225 295 32 74 chr20 53675441 53675536 -12992469 + L2 LINE L2 3180 3270 -2 188 254 0 113 chr20 53675917 53675988 -12992017 + L2 LINE L2 3251 3313 0 282 105 0 123 chr20 53676112 53676169 -12991836 + L2 LINE L2 3262 3311 -2 205 282 0 14 chr20 53676886 53676957 -12991048 + G-rich Low_complexity Low_complexity 1 70 0 244 214 0 56 chr20 53678044 53678133 -12989872 + CT-rich Low_complexity Low_complexity 2 85 0 461 218 0 0 chr20 53678317 53678418 -12989587 + FRAM SINE Alu 66 166 -10 395 303 50 34 chr20 53678539 53678777 -12989228 - L2 LINE L2 -219 3094 2853 2309 118 0 3 chr20 53678870 53679176 -12988829 - AluSx SINE Alu -7 305 1 1544 143 92 29 chr20 53679194 53679467 -12988538 - AluJo SINE Alu -22 290 1 270 230 103 40 chr20 53679496 53679622 -12988383 + L2 LINE L2 3137 3270 -2 743 204 74 0 chr20 53679716 53679892 -12988113 - MER5A DNA MER1_type 0 189 1 532 214 124 62 chr20 53680480 53680690 -12987315 + Charlie8 DNA MER1_type 12 234 -2183 218 278 69 14 chr20 53680777 53680849 -12987156 - MIR SINE MIR -164 98 23 190 200 130 70 chr20 53681262 53681377 -12986628 + L2 LINE L2 2912 3033 -280 543 178 75 81 chr20 53681452 53681577 -12986428 - MER96B DNA MER1_type? -244 173 48 2388 102 0 3 chr20 53681577 53681891 -12986114 - AluSq SINE Alu 0 313 1 543 178 75 81 chr20 53681891 53681939 -12986066 - MER96B DNA MER1_type? -369 48 1 418 240 31 31 chr20 53681963 53682092 -12985913 + MIR SINE MIR 23 151 -57 363 263 114 0 chr20 53682418 53682532 -12985473 - L2 LINE L2 -6 3266 3140 1050 216 22 43 chr20 53683149 53683427 -12984578 + MER102a DNA MER1_type 59 330 0 491 270 85 52 chr20 53683720 53683931 -12984074 - MIR SINE MIR -1 261 44 180 250 83 12 chr20 53684867 53684951 -12983054 - MIR SINE MIR -89 119 30 287 299 11 0 chr20 53685030 53685117 -12982888 + L2 LINE L2 2955 3042 -271 1878 147 0 42 chr20 53686454 53686760 -12981245 + AluJo SINE Alu 12 304 -8 946 223 10 10 chr20 53686949 53687146 -12980859 + LTR40b LTR ERVL 1 197 -265 1914 137 24 0 chr20 53687146 53687482 -12980523 + L1MB2 LINE L1 5800 6143 -28 369 0 0 0 chr20 53687482 53687523 -12980482 + (TG)n Simple_repeat Simple_repeat 2 42 0 913 195 161 13 chr20 53687545 53687781 -12980224 + LTR40b LTR ERVL 184 454 -8 2345 103 0 3 chr20 53687890 53688191 -12979814 - AluSx SINE Alu -12 300 1 304 203 162 0 chr20 53688200 53688274 -12979731 + L2 LINE L2 3226 3311 -2 187 219 0 0 chr20 53688566 53688607 -12979398 - MIR SINE MIR -64 144 104 643 98 0 0 chr20 53688944 53689036 -12978969 - AluSg/x SINE Alu -11 298 207 196 275 0 0 chr20 53689517 53689557 -12978448 - L2 LINE L2 -11 3302 3263 419 289 38 62 chr20 53689727 53689938 -12978067 - L2 LINE L2 0 3313 3108 622 312 11 35 chr20 53690225 53690510 -12977495 + L2 LINE L2 2888 3165 -148 312 214 199 23 chr20 53690642 53690773 -12977232 - LTR33 LTR ERVL -335 186 33 392 276 24 47 chr20 53690892 53691062 -12976943 + MIR SINE MIR 46 211 -51 256 365 50 19 chr20 53691971 53692130 -12975875 + MIR3 SINE MIR 42 205 -3 885 206 41 41 chr20 53692130 53692302 -12975703 - MER20 DNA MER1_type 0 219 45 2031 145 10 7 chr20 53692302 53692612 -12975393 + AluJo SINE Alu 1 311 -1 885 206 41 41 chr20 53692612 53692658 -12975347 - MER20 DNA MER1_type -173 46 1 357 236 146 9 chr20 53692754 53692864 -12975141 - L2 LINE L2 -2 3270 3146 2499 74 0 16 chr20 53693009 53693321 -12974684 + AluY SINE Alu 1 307 -4 853 129 0 43 chr20 53693330 53693469 -12974536 + FLAM_C SINE Alu 1 133 0 1006 254 104 57 chr20 53693664 53693735 -12974270 - MLT1C LTR MaLR 0 467 401 2179 127 0 3 chr20 53693735 53694035 -12973970 + AluSg SINE Alu 1 299 -11 1006 254 104 57 chr20 53694035 53694404 -12973601 - MLT1C LTR MaLR -66 401 6 2810 294 147 15 chr20 53694570 53696080 -12971925 + L2 LINE L2 1042 2750 -564 1549 152 20 8 chr20 53696157 53696407 -12971598 + AluJo SINE Alu 58 310 -2 316 283 30 10 chr20 53696409 53696536 -12971469 - MIR SINE MIR -78 130 1 1039 164 6 0 chr20 53696629 53696806 -12971199 - MER45A DNA AcHobo 0 178 1 2275 101 7 10 chr20 53697145 53697442 -12970563 + AluSq SINE Alu 1 296 -17 3412 135 37 22 chr20 53697519 53697825 -12970180 + MER7C DNA MER2_type 2 302 -2726 2126 115 3 17 chr20 53697825 53698120 -12969885 - AluSg SINE Alu -19 291 1 3412 135 37 22 chr20 53698120 53698405 -12969600 + MER7C DNA MER2_type 302 602 0 1929 169 30 0 chr20 53698495 53698796 -12969209 - AluJo SINE Alu -2 310 1 2184 126 40 0 chr20 53699312 53699661 -12968344 - THE1B LTR MaLR -1 363 1 1157 141 73 10 chr20 53699892 53700098 -12967907 + MER20 DNA MER1_type 1 219 0 338 293 55 94 chr20 53700232 53700539 -12967466 + MLT1L LTR MaLR 97 391 -224 190 311 14 14 chr20 53700708 53700782 -12967223 + MIR SINE MIR 174 247 -15 2373 147 89 2 chr20 53701123 53701539 -12966466 - LTR47A LTR ERVL 0 452 1 2172 116 0 0 chr20 53701555 53701869 -12966136 - AluSq SINE Alu 0 314 1 616 202 48 16 chr20 53701869 53702057 -12965948 + MER113 DNA MER1_type? 64 257 -264 1831 127 8 0 chr20 53702524 53702776 -12965229 - AluSx SINE Alu -58 254 1 4737 160 41 5 chr20 53703196 53704158 -12963847 + L1MB3 LINE L1 5186 6183 0 222 322 151 7 chr20 53704862 53705008 -12962997 + L2 LINE L2 2894 3060 -212 404 238 42 71 chr20 53705216 53705384 -12962621 - Charlie8 DNA MER1_type -2142 275 113 513 242 38 0 chr20 53706140 53706272 -12961733 - MIR SINE MIR 0 262 126 404 182 0 0 chr20 53706272 53706338 -12961667 - AluJ/FLAM SINE Alu -246 66 1 3075 154 32 12 chr20 53706400 53706435 -12961570 - L1MB3 LINE L1 -11 6172 6139 2049 132 20 0 chr20 53706435 53706731 -12961274 - AluSx SINE Alu -10 302 1 3075 154 32 12 chr20 53706731 53707286 -12960719 - L1MB3 LINE L1 -44 6139 5570 628 287 61 4 chr20 53707935 53708165 -12959840 - MIR SINE MIR 0 262 20 294 279 0 0 chr20 53708711 53708790 -12959215 + (TG)n Simple_repeat Simple_repeat 2 80 0 965 232 153 38 chr20 53708833 53709300 -12958705 - MLT1E LTR MaLR 0 593 2 2312 72 3 33 chr20 53709354 53709659 -12958346 - AluY SINE Alu -15 296 1 204 200 50 0 chr20 53709788 53709848 -12958157 + (TG)n Simple_repeat Simple_repeat 1 63 0 1404 130 12 16 chr20 53709881 53710134 -12957871 + L1MA2 LINE L1 6053 6304 0 297 208 10 62 chr20 53710149 53710245 -12957760 + MER106B DNA MER1_type 969 1059 0 258 342 144 0 chr20 53710265 53710376 -12957629 - MIR SINE MIR -12 250 124 1763 208 69 96 chr20 53710402 53710997 -12957008 + MLT1E LTR MaLR 15 593 0 286 253 195 0 chr20 53711005 53711092 -12956913 - MIR SINE MIR -86 122 19 1938 152 0 0 chr20 53711150 53711446 -12956559 + AluSx SINE Alu 1 296 -16 628 249 59 66 chr20 53712316 53712496 -12955509 + MIR SINE MIR 10 180 -82 1943 141 0 3 chr20 53712496 53712793 -12955212 - AluJb SINE Alu -16 296 1 628 249 59 66 chr20 53712793 53712868 -12955137 + MIR SINE MIR 180 254 -8 205 175 0 0 chr20 53713195 53713235 -12954770 + (TG)n Simple_repeat Simple_repeat 1 40 0 584 290 17 6 chr20 53713410 53713586 -12954419 + MIR SINE MIR 71 248 -14 530 257 49 0 chr20 53713644 53713788 -12954217 - LTR16A1 LTR ERVL -30 427 277 331 269 31 62 chr20 53713902 53714032 -12953973 - LTR16A1 LTR ERVL -331 126 1 776 162 7 0 chr20 53714824 53714972 -12953033 + (TCCA)n Simple_repeat Simple_repeat 4 152 0 2850 225 118 114 chr20 53715635 53715782 -12952223 - L1MC4 LINE L1 -1 8041 7896 2058 126 65 14 chr20 53715782 53716138 -12951867 + THE1C LTR MaLR 2 375 0 2850 225 118 114 chr20 53716138 53716489 -12951516 - L1MC4 LINE L1 -146 7896 7548 1837 152 7 3 chr20 53716489 53716779 -12951226 - AluJb SINE Alu -20 292 2 2850 225 118 114 chr20 53716779 53717612 -12950393 - L1MC4 LINE L1 -494 7548 6614 2487 51 0 13 chr20 53717612 53717924 -12950081 - AluY SINE Alu -3 308 1 2850 225 118 114 chr20 53717924 53718544 -12949461 - L1MC4 LINE L1 -1428 6614 5997 1660 218 58 58 chr20 53718542 53718855 -12949150 - L1MC4 LINE L1 -2018 5790 5478 * 2092 125 3 6 chr20 53718855 53719167 -12948838 - AluSx SINE Alu -1 311 1 1660 218 58 58 chr20 53719167 53719225 -12948780 - L1MC4 LINE L1 -2330 5478 5421 3781 101 13 13 chr20 53719225 53719779 -12948226 - L1PA14 LINE L1 0 6161 5608 1660 218 58 58 chr20 53719779 53719897 -12948108 - L1MC4 LINE L1 -2387 5421 5297 2236 99 0 10 chr20 53719897 53720201 -12947804 - AluSx SINE Alu -11 301 1 1660 218 58 58 chr20 53720201 53720246 -12947759 - L1MC4 LINE L1 -2510 5298 5254 202 376 14 28 chr20 53720439 53720580 -12947425 + L2 LINE L2 2447 2585 -729 1152 154 0 0 chr20 53720696 53720884 -12947121 - AluJb SINE Alu -8 304 117 1927 122 31 0 chr20 53720914 53721201 -12946804 + AluJb SINE Alu 1 296 -16 1745 246 59 42 chr20 53721212 53721978 -12946027 - L1ME LINE L1 -5070 1000 26 1835 143 0 11 chr20 53722263 53722589 -12945416 - AluJb SINE Alu 0 323 1 21 57 0 0 chr20 53723535 53723570 -12944435 + AT_rich Low_complexity Low_complexity 1 35 0 1921 142 0 3 chr20 53723581 53723876 -12944129 - AluSx SINE Alu -13 299 6 1851 120 0 0 chr20 53724140 53724406 -12943599 + AluSg1 SINE Alu 35 300 -9 273 317 50 0 chr20 53724656 53724757 -12943248 + MIR SINE MIR 101 206 -56 482 279 25 67 chr20 53726237 53726477 -12941528 - L2 LINE L2 -2 3311 3082 643 263 189 5 chr20 53726980 53727197 -12940808 + MIR SINE MIR 6 262 0 488 266 62 26 chr20 53727281 53727460 -12940545 - L2 LINE L2 -2 3311 3123 2035 128 7 0 chr20 53727460 53727764 -12940241 - AluSx SINE Alu -6 306 1 488 266 62 26 chr20 53727764 53727776 -12940229 - L2 LINE L2 -190 3123 3113 852 296 71 28 chr20 53727800 53728343 -12939662 - MLT1L LTR MaLR -15 600 5 574 283 86 85 chr20 53728695 53729637 -12938368 + L2 LINE L2 2308 3250 -22 330 342 34 43 chr20 53729722 53730096 -12937909 - L2 LINE L2 -213 3059 2686 2106 132 0 0 chr20 53730096 53730400 -12937605 + AluSx SINE Alu 1 304 -8 330 342 34 43 chr20 53730400 53730430 -12937575 - L2 LINE L2 -586 2686 2657 443 239 73 0 chr20 53731006 53731115 -12936890 - MIR SINE MIR -70 192 76 528 271 106 14 chr20 53731224 53731431 -12936574 - MIR SINE MIR -1 261 36 322 239 64 37 chr20 53732129 53732238 -12935767 - MIR SINE MIR -114 148 37 315 211 46 4 chr20 53732453 53732539 -12935466 + MIR SINE MIR 61 147 -61 658 145 114 8 chr20 53732863 53732994 -12935011 - L1ME3A LINE L1 -5 6165 6021 1641 120 124 4 chr20 53733016 53733293 -12934712 + AluSc SINE Alu 1 299 0 797 238 55 30 chr20 53733371 53733509 -12934496 - MIR SINE MIR -44 218 72 2764 76 22 3 chr20 53733509 53733877 -12934128 + THE1C LTR MaLR 1 375 0 797 238 55 30 chr20 53733877 53733940 -12934065 - MIR SINE MIR -190 72 12 1940 145 7 0 chr20 53734912 53735215 -12932790 + AluSx SINE Alu 1 305 -7 343 214 12 12 chr20 53735260 53735344 -12932661 + MIR SINE MIR 92 175 -87 482 176 85 106 chr20 53735385 53735469 -12932536 - ORSL DNA AcHobo -8 267 183 1840 145 7 3 chr20 53735469 53735765 -12932240 + AluSx SINE Alu 1 297 -15 482 176 85 106 chr20 53735765 53735879 -12932126 - ORSL DNA AcHobo -92 183 73 476 172 38 38 chr20 53735860 53736017 -12931988 - ORSL DNA AcHobo -118 157 1 * 643 260 137 43 chr20 53736060 53736410 -12931595 - MLT1J LTR MaLR -94 417 35 433 318 99 40 chr20 53736666 53736968 -12931037 + L2 LINE L2 2991 3310 -3 1304 259 108 7 chr20 53737087 53737743 -12930262 - L2 LINE L2 -25 3288 2553 226 208 78 52 chr20 53738154 53738231 -12929774 - MIR3 SINE MIR -48 160 82 198 0 0 0 chr20 53739078 53739100 -12928905 + (T)n Simple_repeat Simple_repeat 1 22 0 1485 243 120 23 chr20 53739402 53739843 -12928162 - MLT1K LTR MaLR -18 570 87 2111 82 16 10 chr20 53740424 53740728 -12927277 - AluSc SINE Alu -3 306 1 198 250 260 10 chr20 53741466 53741562 -12926443 + MER5A DNA MER1_type 41 160 -29 * 396 257 0 46 chr20 53741490 53741599 -12926406 - MER5A DNA MER1_type -77 112 9 315 203 0 14 chr20 53742184 53742253 -12925752 - MLT1H LTR MaLR 0 549 482 1026 203 5 0 chr20 53742263 53742460 -12925545 - L1PA16 LINE L1 -16 6150 5953 536 242 188 76 chr20 53742635 53742991 -12925014 - MLT1H LTR MaLR -113 436 41 234 91 0 0 chr20 53743075 53743108 -12924897 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 54 56 0 32 chr20 53743514 53743537 -12924468 + AT_rich Low_complexity Low_complexity 1 23 -99 1166 95 21 21 chr20 53743537 53743727 -12924278 - L1MA2 LINE L1 -4 6300 6111 54 56 0 32 chr20 53743727 53743829 -12924176 + AT_rich Low_complexity Low_complexity 23 122 0 1362 91 110 0 chr20 53743829 53744038 -12923967 - L1MA2 LINE L1 -159 6145 5914 284 173 49 99 chr20 53744222 53744303 -12923702 + MER63 DNA MER1_type 676 752 -310 375 264 9 55 chr20 53744352 53744462 -12923543 - MIR SINE MIR -80 182 78 226 132 0 53 chr20 53744484 53744522 -12923483 - MER4B LTR ERV1 -469 141 106 245 260 0 0 chr20 53744540 53744590 -12923415 + MER63 DNA MER1_type 1001 1050 -10 523 267 148 10 chr20 53744604 53744806 -12923199 + MIR SINE MIR 31 260 -2 505 261 28 21 chr20 53745050 53745192 -12922813 - MIR SINE MIR -79 183 41 800 162 26 7 chr20 53745271 53745425 -12922580 - L1MB7 LINE L1 0 6184 6028 699 224 50 50 chr20 53746835 53747054 -12920951 - MER20 DNA MER1_type 0 219 1 4309 113 11 2 chr20 53747097 53747718 -12920287 + MER41B LTR ERV1 1 627 -8 1945 115 6 43 chr20 53747736 53748058 -12919947 + AluSg SINE Alu 1 310 0 441 261 95 52 chr20 53748109 53748320 -12919685 + MIR SINE MIR 3 222 -40 785 263 26 49 chr20 53750172 53750438 -12917567 + MIR SINE MIR 3 262 0 417 243 45 27 chr20 53750597 53750708 -12917297 - MIR SINE MIR -39 223 111 228 242 45 15 chr20 53751264 53751330 -12916675 - MIR SINE MIR -188 74 7 570 206 189 22 chr20 53751344 53751524 -12916481 + MIR SINE MIR 12 221 -41 1661 176 3 10 chr20 53751648 53751944 -12916061 - AluJb SINE Alu -18 294 1 829 204 43 22 chr20 53753075 53753283 -12914722 + MIR SINE MIR 11 223 -39 230 270 63 87 chr20 53753315 53753441 -12914564 - MIR SINE MIR -108 154 32 2108 85 3 34 chr20 53754821 53755116 -12912889 + AluSg SINE Alu 1 286 -24 215 147 441 15 chr20 53755120 53755188 -12912817 + MER5A DNA MER1_type 9 105 -84 245 196 59 0 chr20 53755318 53755369 -12912636 + MLT1J LTR MaLR 458 511 0 312 288 114 8 chr20 53755403 53755535 -12912470 - MIR SINE MIR -89 173 28 329 252 19 116 chr20 53755864 53756044 -12911961 - MER5A DNA MER1_type -9 180 8 2027 130 0 3 chr20 53756100 53756392 -12911613 - AluSx SINE Alu -21 291 1 2705 195 84 5 chr20 53756705 53757285 -12910720 + MLT1E2 LTR MaLR 1 626 0 646 273 125 30 chr20 53757502 53757901 -12910104 - L1ME4a LINE L1 -120 6001 5565 401 178 14 0 chr20 53758903 53758976 -12909029 - MER103 DNA DNA -80 86 13 192 260 60 0 chr20 53759075 53759125 -12908880 - MIR SINE MIR -68 140 88 758 118 7 30 chr20 53759578 53759713 -12908292 + L1PA6 LINE L1 6019 6150 -4 24 0 0 0 chr20 53759792 53759816 -12908189 + AT_rich Low_complexity Low_complexity 1 24 0 1854 153 91 26 chr20 53759919 53760127 -12907878 + MLT1A1 LTR MaLR 1 241 -124 2228 116 36 33 chr20 53760127 53760489 -12907516 - THE1B LTR MaLR -1 363 1 1854 153 91 26 chr20 53760489 53760619 -12907386 + MLT1A1 LTR MaLR 241 361 -4 877 204 23 41 chr20 53760885 53761105 -12906900 + MER20 DNA MER1_type 1 216 -3 237 298 48 19 chr20 53761844 53761948 -12906057 - MIR SINE MIR -108 154 48 306 50 0 0 chr20 53762086 53762126 -12905879 + (TG)n Simple_repeat Simple_repeat 1 40 0 713 242 15 14 chr20 53762138 53762350 -12905655 + MIR SINE MIR 13 225 -37 1630 279 13 21 chr20 53762915 53763389 -12904616 + MLT1K LTR MaLR 11 480 -108 21 0 0 0 chr20 53763751 53763772 -12904233 + AT_rich Low_complexity Low_complexity 1 21 0 357 291 112 81 chr20 53763933 53764218 -12903787 + L2 LINE L2 3016 3309 -4 707 129 57 0 chr20 53764274 53764398 -12903607 + L1MA2 LINE L1 6174 6304 0 183 294 71 35 chr20 53764622 53764707 -12903298 - MIR SINE MIR -68 194 107 1896 101 21 21 chr20 53765452 53765740 -12902265 - AluSx SINE Alu -24 288 1 421 331 22 11 chr20 53765930 53766114 -12901891 + MIR SINE MIR 64 249 -13 340 271 56 0 chr20 53766144 53766251 -12901754 - MIR SINE MIR -62 146 34 298 282 247 22 chr20 53766408 53766724 -12901281 - L2 LINE L2 -5 3308 2922 553 257 114 45 chr20 53766776 53766978 -12901027 - MLT1D LTR MaLR 0 505 290 411 160 0 0 chr20 53767018 53767093 -12900912 + CT-rich Low_complexity Low_complexity 4 78 0 1757 151 30 7 chr20 53767098 53767397 -12900608 - AluJo SINE Alu -6 306 1 1678 150 11 11 chr20 53767399 53767685 -12900320 - AluSq SINE Alu -13 300 15 684 244 128 0 chr20 53768322 53768502 -12899503 + MIR SINE MIR 7 209 -53 2331 49 3 29 chr20 53768606 53768914 -12899091 - AluSq SINE Alu -13 300 1 239 213 0 88 chr20 53768917 53768997 -12899008 - MER5A DNA MER1_type -116 73 1 1990 121 7 19 chr20 53769127 53769261 -12898744 + AluJb SINE Alu 1 135 -177 2103 106 0 3 chr20 53769261 53769577 -12898428 + AluSx SINE Alu 1 315 0 1990 121 7 19 chr20 53769577 53769748 -12898257 + AluJb SINE Alu 135 303 -9 268 355 22 14 chr20 53769839 53769977 -12898028 + MIR3 SINE MIR 2 140 -68 2529 205 33 16 chr20 53770147 53770694 -12897311 - MER68 LTR ERV1 -6 556 1 681 274 13 58 chr20 53770708 53770934 -12897071 + LTR67 LTR ERVL 3 218 -339 1260 164 4 4 chr20 53770938 53771163 -12896842 + AluJb SINE Alu 87 311 -1 313 301 83 51 chr20 53771179 53771455 -12896550 + LTR67 LTR ERVL 244 528 -29 676 209 116 43 chr20 53771496 53771773 -12896232 - MER113 DNA MER1_type? -44 477 181 517 268 118 41 chr20 53772343 53772683 -12895322 + L2 LINE L2 2855 3220 -93 597 231 35 12 chr20 53772684 53772853 -12895152 - MER45A DNA AcHobo -3 175 3 355 264 46 0 chr20 53772853 53772940 -12895065 + L2 LINE L2 3210 3300 -13 186 71 0 0 chr20 53772940 53772968 -12895037 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 908 208 85 30 chr20 53773880 53774116 -12893889 - MIR SINE MIR 0 262 14 532 251 63 35 chr20 53774293 53774473 -12893532 - MIR SINE MIR -62 146 8 418 263 17 25 chr20 53774562 53774680 -12893325 - MIR SINE MIR -138 124 8 277 256 171 39 chr20 53774790 53774919 -12893086 + MIR SINE MIR 21 125 -83 427 254 108 33 chr20 53776105 53776318 -12891687 + L2 LINE L2 2545 2773 -541 440 245 133 7 chr20 53776358 53776501 -12891504 + L2 LINE L2 3152 3312 -1 670 305 99 4 chr20 53776700 53776933 -12891072 + MIR SINE MIR 1 255 -7 269 245 61 41 chr20 53776967 53777065 -12890940 - MIR SINE MIR -34 228 129 658 200 36 48 chr20 53777126 53777291 -12890714 + MER5B DNA MER1_type 1 163 -15 1688 138 15 0 chr20 53777704 53777998 -12890007 + AluSp SINE Alu 11 308 0 467 191 199 7 chr20 53778124 53778260 -12889745 + MER53 DNA DNA 28 189 0 437 293 112 52 chr20 53778293 53778525 -12889480 + MIR SINE MIR 17 262 0 248 217 154 83 chr20 53778595 53778742 -12889263 - L1ME4a LINE L1 -1 6120 5948 2180 104 3 0 chr20 53778742 53779040 -12888965 + AluSp SINE Alu 1 299 -14 248 217 154 83 chr20 53779040 53779132 -12888873 - L1ME4a LINE L1 -173 5948 5864 416 149 0 0 chr20 53779134 53779201 -12888804 + Tigger2 DNA MER2_type 1 67 -2651 * 2388 170 41 11 chr20 53779189 53779625 -12888380 + Tigger2 DNA MER2_type 2270 2718 0 252 194 155 29 chr20 53779666 53779769 -12888236 - L1ME4a LINE L1 -317 5804 5689 254 135 0 0 chr20 53780575 53780612 -12887393 - MER8 DNA MER2_type -29 210 174 * 1215 142 90 9 chr20 53780599 53780832 -12887173 + Tigger2 DNA MER2_type 2267 2518 -200 716 293 10 0 chr20 53781198 53781403 -12886602 + MIR SINE MIR 35 241 -21 326 293 152 49 chr20 53781456 53781620 -12886385 - MER5A DNA MER1_type 0 189 9 486 250 23 23 chr20 53781632 53781764 -12886241 + MER5A DNA MER1_type 49 180 -9 339 234 0 0 chr20 53782036 53782100 -12885905 - MER89 LTR ERV1 -298 261 198 327 188 16 0 chr20 53782074 53782138 -12885867 - MER89 LTR ERV1 -470 89 25 * 448 238 58 0 chr20 53782626 53782756 -12885249 - MIR SINE MIR -62 146 45 696 295 153 7 chr20 53783639 53784052 -12883953 + L1ME4a LINE L1 5461 5933 -188 570 319 76 17 chr20 53784248 53784486 -12883519 + MIR SINE MIR 7 258 -4 232 71 0 0 chr20 53785528 53785556 -12882449 + LTR6A LTR ERV1 73 100 -464 230 345 163 20 chr20 53785634 53785837 -12882168 + L3 LINE CR1 1277 1508 -69 187 331 90 15 chr20 53785900 53786033 -12881972 + MIR3 SINE MIR 2 144 -64 183 179 0 125 chr20 53786161 53786217 -12881788 - L2 LINE L2 0 3313 3265 1997 112 3 14 chr20 53786920 53787216 -12880789 + AluSx SINE Alu 1 293 -19 33 43 0 0 chr20 53787232 53787279 -12880726 + AT_rich Low_complexity Low_complexity 1 47 0 217 241 0 62 chr20 53787384 53787481 -12880524 + (TTATA)n Simple_repeat Simple_repeat 1 102 -337 1962 135 10 3 chr20 53787481 53787777 -12880228 + AluSx SINE Alu 1 298 -14 217 241 0 62 chr20 53787777 53787853 -12880152 + (TTATA)n Simple_repeat Simple_repeat 102 439 0 181 256 8 101 chr20 53787977 53788091 -12879914 - L2 LINE L2 -797 2517 2415 4753 170 29 15 chr20 53788091 53788998 -12879007 - MER49 LTR ERV1 0 923 5 181 256 8 101 chr20 53788998 53789012 -12878993 - L2 LINE L2 -899 2415 2401 41 0 0 0 chr20 53789215 53789256 -12878749 + AT_rich Low_complexity Low_complexity 1 41 0 1826 138 3 14 chr20 53789256 53789547 -12878458 - AluSq SINE Alu -23 290 3 594 246 71 14 chr20 53789632 53789843 -12878162 + MER113 DNA MER1_type? 2 224 -297 576 297 101 24 chr20 53789844 53790081 -12877924 - MIR SINE MIR -6 256 4 1056 224 28 89 chr20 53790092 53790450 -12877555 + MER58B DNA MER1_type 6 341 0 532 205 53 46 chr20 53790513 53790664 -12877341 + MER113 DNA MER1_type? 330 481 -40 1540 183 0 24 chr20 53790667 53790956 -12877049 + AluJo SINE Alu 1 282 -30 2267 76 0 0 chr20 53790963 53791254 -12876751 - AluSc SINE Alu -18 291 1 219 36 0 0 chr20 53791263 53791291 -12876714 + (A)n Simple_repeat Simple_repeat 1 28 0 181 116 23 23 chr20 53791985 53792028 -12875977 + CT-rich Low_complexity Low_complexity 3 45 0 2589 55 0 0 chr20 53792042 53792353 -12875652 + AluY SINE Alu 1 311 0 1354 176 72 15 chr20 53792362 53792624 -12875381 - AluJo SINE Alu -35 277 1 378 238 20 30 chr20 53792730 53792831 -12875174 - MIR SINE MIR -142 120 21 636 248 30 61 chr20 53793088 53793101 -12874904 - MER58A DNA MER1_type -2196 224 212 2250 90 0 0 chr20 53793101 53793400 -12874605 - AluSx SINE Alu -1 311 13 636 248 30 61 chr20 53793400 53793616 -12874389 - MER58A DNA MER1_type -2208 212 2 23 0 0 0 chr20 53793674 53793697 -12874308 + AT_rich Low_complexity Low_complexity 1 23 0 298 320 48 61 chr20 53794275 53794422 -12873583 + MIR SINE MIR 21 165 -97 643 315 15 0 chr20 53794460 53794660 -12873345 - MIR SINE MIR -1 261 59 1074 268 109 50 chr20 53795038 53795616 -12872389 - MLT1L LTR MaLR -2 613 2 681 226 19 7 chr20 53795743 53795898 -12872107 + MIR SINE MIR 72 228 -34 889 244 98 49 chr20 53795929 53795956 -12872049 - MER102b DNA MER1_type -1105 323 299 468 298 0 9 chr20 53795956 53796070 -12871935 + MER81 DNA DNA 2 114 0 889 244 98 49 chr20 53796070 53796349 -12871656 - MER102b DNA MER1_type -1129 299 2 1795 145 3 3 chr20 53796879 53797162 -12870843 + AluSx SINE Alu 1 283 -29 333 0 0 0 chr20 53797164 53797201 -12870804 + (CA)n Simple_repeat Simple_repeat 2 38 0 * 360 43 0 0 chr20 53797200 53797246 -12870759 + (GA)n Simple_repeat Simple_repeat 2 47 0 1244 235 137 9 chr20 53797685 53798145 -12869860 + MER113 DNA MER1_type? 1 519 -2 206 255 85 0 chr20 53798523 53798570 -12869435 - L2 LINE L2 -3 3269 3219 333 309 59 22 chr20 53798729 53798865 -12869140 + L1ME LINE L1 352 492 -5924 668 329 32 42 chr20 53799360 53799740 -12868265 + LTR16C LTR ERVL 115 490 -1 1050 278 105 24 chr20 53799890 53800747 -12867258 + L1ME LINE L1 899 2031 -4576 481 176 0 0 chr20 53800858 53800932 -12867073 - Tigger2a DNA MER2_type 0 434 361 756 156 8 23 chr20 53800955 53801083 -12866922 - FLAM_C SINE Alu -16 127 2 2324 126 32 32 chr20 53801084 53801240 -12866765 - Tigger2a DNA MER2_type -2327 381 226 455 0 0 0 chr20 53801240 53801294 -12866711 + L1PA3 LINE L1 6099 6152 -3 2324 126 32 32 chr20 53801294 53801517 -12866488 - Tigger2a DNA MER2_type -2481 227 2 240 35 0 0 chr20 53801652 53801681 -12866324 + (TG)n Simple_repeat Simple_repeat 2 30 0 444 77 0 0 chr20 53801714 53801779 -12866226 + (TG)n Simple_repeat Simple_repeat 2 66 0 1122 174 5 19 chr20 53801785 53801992 -12866013 - AluJb SINE Alu -24 288 85 2074 247 100 30 chr20 53802004 53802425 -12865580 + L1ME LINE L1 2241 2631 -3795 2156 101 3 3 chr20 53802425 53802723 -12865282 - AluSp SINE Alu -13 300 3 2074 247 100 30 chr20 53802723 53803272 -12864733 + L1ME LINE L1 2631 3255 -3171 366 227 34 0 chr20 53803272 53803360 -12864645 + L1ME LINE L1 248 338 -6269 309 222 0 0 chr20 53803426 53803489 -12864516 + L1ME LINE L1 1239 1301 -5115 597 216 46 13 chr20 53803494 53803647 -12864358 + L1ME1 LINE L1 6007 6164 -2 2055 115 3 13 chr20 53803656 53803968 -12864037 + AluSp SINE Alu 1 309 -4 4337 253 87 48 chr20 53803970 53805949 -12862056 + L1ME LINE L1 3247 5388 -1062 2076 103 10 0 chr20 53805949 53806249 -12861756 - AluSc SINE Alu -6 303 1 4337 253 87 48 chr20 53806249 53807355 -12860650 + L1ME LINE L1 5388 6450 0 489 297 94 93 chr20 53807392 53808166 -12859839 - L2 LINE L2 -5 3267 2483 24 0 0 0 chr20 53809113 53809137 -12858868 + AT_rich Low_complexity Low_complexity 1 24 0 1057 169 0 0 chr20 53809248 53809425 -12858580 - FRAM SINE Alu -7 169 1 2388 68 3 3 chr20 53809439 53809750 -12858255 - AluSp SINE Alu -2 311 1 2409 97 0 0 chr20 53911533 53911841 -12756164 + AluSq SINE Alu 1 308 -5 264 362 117 61 chr20 53913893 53914269 -12753736 + L2 LINE L2 2851 3247 -25 234 0 0 0 chr20 53914333 53914359 -12753646 + (TTG)n Simple_repeat Simple_repeat 2 27 0 2244 71 0 27 chr20 53914364 53914659 -12753346 - AluY SINE Alu -24 287 1 957 191 27 32 chr20 53915057 53915277 -12752728 + MER20 DNA MER1_type 1 219 0 230 297 16 0 chr20 53916612 53916676 -12751329 - L2 LINE L2 0 3313 3249 640 251 86 16 chr20 53916683 53916870 -12751135 - MER63A DNA MER1_type -10 200 1 573 263 71 22 chr20 53916879 53917103 -12750902 - L2 LINE L2 -81 3232 2998 361 273 21 2 chr20 53917589 53917702 -12750303 - MIR SINE MIR -67 141 28 437 316 79 11 chr20 53918149 53918326 -12749679 - MIR SINE MIR -54 208 20 225 385 46 40 chr20 53918702 53918780 -12749225 - L3 LINE CR1 -1043 534 458 2341 117 0 0 chr20 53918780 53919089 -12748916 + AluSx SINE Alu 1 309 -3 225 385 46 40 chr20 53919089 53919295 -12748710 - L3 LINE CR1 -1119 458 245 2702 89 11 3 chr20 53919295 53919656 -12748349 + THE1B LTR MaLR 1 364 0 225 385 46 40 chr20 53919656 53919695 -12748310 - L3 LINE CR1 -1332 245 208 1122 159 30 5 chr20 53919696 53919897 -12748108 - MER3 DNA MER1_type -2 207 2 592 342 65 4 chr20 53920028 53920259 -12747746 + MIR SINE MIR 9 253 -9 333 298 49 57 chr20 53921022 53921164 -12746841 + MIR SINE MIR 15 154 -63 797 216 100 0 chr20 53921206 53921396 -12746609 + MER3 DNA MER1_type 1 209 0 249 313 54 18 chr20 53923050 53923162 -12744843 + L2 LINE L2 3198 3313 0 194 349 26 31 chr20 53923238 53923385 -12744620 - MIR SINE MIR -61 147 3 215 280 11 0 chr20 53924170 53924263 -12743742 + (TA)n Simple_repeat Simple_repeat 1 94 0 224 266 0 16 chr20 53924264 53924328 -12743677 + (CA)n Simple_repeat Simple_repeat 2 64 0 311 354 23 0 chr20 53924331 53924461 -12743544 - L1MC/D LINE L1 -2051 5757 5625 32 26 0 0 chr20 53924467 53924506 -12743499 + AT_rich Low_complexity Low_complexity 1 39 0 245 299 0 0 chr20 53924604 53924671 -12743334 + MIR SINE MIR 190 256 -6 266 270 70 60 chr20 53925845 53925945 -12742060 + MIR SINE MIR 31 131 -77 2941 112 4 11 chr20 53926048 53926502 -12741503 + L1PA14 LINE L1 5711 6161 0 616 276 0 26 chr20 53926747 53926939 -12741066 - MIR SINE MIR -10 252 66 303 230 0 0 chr20 53928275 53928362 -12739643 + GA-rich Low_complexity Low_complexity 2 88 0 571 319 98 7 chr20 53928902 53929331 -12738674 + L1ME3 LINE L1 5410 5877 -293 362 358 106 7 chr20 53930699 53930850 -12737155 - L2 LINE L2 -6 3266 3101 1610 193 75 27 chr20 53930864 53930906 -12737099 + Charlie4a DNA MER1_type 36 74 -1887 2398 83 0 13 chr20 53930906 53931219 -12736786 - AluY SINE Alu -2 309 1 1610 193 75 27 chr20 53931219 53931627 -12736378 + Charlie4a DNA MER1_type 74 508 0 312 91 0 0 chr20 53932217 53932261 -12735744 + (CA)n Simple_repeat Simple_repeat 2 45 0 2790 183 28 40 chr20 53932269 53932877 -12735128 + MER82 DNA MER2_type 52 652 -1 1455 163 50 13 chr20 53932884 53933185 -12734820 - MLT2C1 LTR ERVL -83 314 3 263 316 0 0 chr20 53933779 53933858 -12734147 + MER58 DNA MER1_type 2341 2419 -1 438 246 0 8 chr20 53934406 53934524 -12733481 + L1ME3 LINE L1 6043 6159 -3 300 102 0 0 chr20 53934598 53934647 -12733358 + (CA)n Simple_repeat Simple_repeat 2 50 0 198 0 0 0 chr20 53934709 53934731 -12733274 + (CA)n Simple_repeat Simple_repeat 1 22 0 1196 196 118 7 chr20 53937167 53937473 -12730532 - MER58B DNA MER1_type 0 341 2 195 114 0 0 chr20 53938505 53938540 -12729465 + (GA)n Simple_repeat Simple_repeat 2 36 0 1923 33 0 16 chr20 53938965 53939210 -12728795 - L1PA4 LINE L1 -350 5805 5565 3053 25 0 6 chr20 53939210 53939566 -12728439 + L1PA4 LINE L1 5798 6154 -1 213 265 20 0 chr20 53940555 53940604 -12727401 + L3 LINE CR1 1245 1294 -283 211 271 206 47 chr20 53940695 53940802 -12727203 - MER5B DNA MER1_type -4 174 51 641 279 192 47 chr20 53940853 53941064 -12726941 + L2 LINE L2 2824 3003 -310 1758 186 28 85 chr20 53941064 53941381 -12726624 - MLT1C LTR MaLR 0 467 186 1477 189 28 21 chr20 53941381 53941541 -12726464 - AluJb SINE Alu -24 288 124 1835 111 4 23 chr20 53941541 53941803 -12726202 - AluSx SINE Alu -16 296 40 1477 189 28 21 chr20 53941803 53941928 -12726077 - AluJb SINE Alu -188 124 1 1758 186 28 85 chr20 53941928 53942105 -12725900 - MLT1C LTR MaLR -281 186 1 641 279 192 47 chr20 53942105 53942320 -12725685 + L2 LINE L2 3003 3312 -1 581 371 19 23 chr20 53942323 53942582 -12725423 + L3 LINE CR1 1319 1576 -1 23 0 0 0 chr20 53942775 53942798 -12725207 + AT_rich Low_complexity Low_complexity 1 23 0 26 50 0 0 chr20 53943430 53943470 -12724535 + AT_rich Low_complexity Low_complexity 1 40 0 470 260 137 44 chr20 53943471 53943679 -12724326 - L1ME4a LINE L1 -9 6181 5994 1071 218 18 0 chr20 53943679 53943899 -12724106 - MER58A DNA MER1_type 0 224 1 470 260 137 44 chr20 53943899 53944099 -12723906 - L1ME4a LINE L1 -196 5994 5732 906 255 17 0 chr20 53944466 53944705 -12723300 - L1ME4a LINE L1 -503 5730 5488 * 4661 255 31 30 chr20 53944698 53946513 -12721492 - L1ME4a LINE L1 -1128 5087 3272 2342 250 108 46 chr20 53946514 53948432 -12719573 - L1MEc LINE L1 -3589 2626 660 654 203 60 44 chr20 53948450 53948632 -12719373 + MER20 DNA MER1_type 7 191 -28 619 333 67 14 chr20 53948816 53949237 -12718768 - L1MEc LINE L1 -5919 477 35 1167 135 0 0 chr20 53949472 53949635 -12718370 - AluSg/x SINE Alu -9 303 141 272 176 20 0 chr20 53949730 53949781 -12718224 - L2 LINE L2 -4 3309 3258 6105 173 15 31 chr20 53949817 53951127 -12716878 + L1MC3 LINE L1 6481 7769 -16 1372 287 136 50 chr20 53951132 53951598 -12716407 - L2 LINE L2 -78 3235 2811 2272 110 0 3 chr20 53951598 53951906 -12716099 + AluSq SINE Alu 1 307 -6 1372 287 136 50 chr20 53951906 53952424 -12715581 - L2 LINE L2 -502 2811 2153 230 300 86 0 chr20 53952436 53952506 -12715499 - L2 LINE L2 -35 3278 3203 5202 84 7 5 chr20 53953578 53954337 -12713668 + L1MA1 LINE L1 5514 6273 -29 359 136 0 34 chr20 53954350 53954438 -12713567 + (TA)n Simple_repeat Simple_repeat 2 86 0 260 324 10 10 chr20 53954447 53954549 -12713456 + Charlie8 DNA MER1_type 130 231 -2186 740 219 22 67 chr20 53954622 53954846 -12713159 + MER20 DNA MER1_type 1 214 -5 334 294 37 9 chr20 53955033 53955142 -12712863 - MIR SINE MIR -3 259 148 853 318 9 9 chr20 53955236 53955469 -12712536 + MIR SINE MIR 29 261 -1 195 69 0 0 chr20 53955483 53955512 -12712493 + (TTG)n Simple_repeat Simple_repeat 2 30 0 341 246 44 35 chr20 53955543 53955657 -12712348 - MLT1K LTR MaLR -123 465 351 421 299 81 27 chr20 53955724 53955945 -12712060 - MLT1K LTR MaLR -348 240 8 275 289 155 9 chr20 53955945 53956053 -12711952 - MIR SINE MIR -63 145 34 369 331 125 40 chr20 53956194 53956825 -12711180 + L1MC4a LINE L1 4462 5146 -1000 1485 249 27 14 chr20 53956851 53957296 -12710709 + MLT1C LTR MaLR 15 465 -2 601 245 119 0 chr20 53958076 53958235 -12709770 + MER45A DNA AcHobo 1 178 0 22 0 0 0 chr20 53958602 53958624 -12709381 + AT_rich Low_complexity Low_complexity 1 22 0 185 94 31 0 chr20 53958975 53959007 -12708998 + (TTCA)n Simple_repeat Simple_repeat 3 35 0 470 316 53 50 chr20 53959144 53959332 -12708673 + L1MC4a LINE L1 5644 5835 -1973 2138 132 36 36 chr20 53959332 53959696 -12708309 - THE1B LTR MaLR 0 364 1 470 316 53 50 chr20 53959696 53959827 -12708178 + L1MC4a LINE L1 5835 5964 -1844 23 33 0 0 chr20 53960025 53960055 -12707950 + AT_rich Low_complexity Low_complexity 1 30 0 1445 287 43 31 chr20 53960447 53961059 -12706946 - MLT1G LTR MaLR -2 588 1 348 285 64 55 chr20 53961059 53961237 -12706768 - MIR SINE MIR -65 143 2 396 307 126 20 chr20 53962311 53962660 -12705345 - L1ME4a LINE L1 -103 6018 5633 794 41 41 0 chr20 53962763 53962885 -12705120 + (TTTC)n Simple_repeat Simple_repeat 1 127 0 1163 224 78 16 chr20 53962979 53963300 -12704705 + MER58B DNA MER1_type 1 341 0 402 328 67 32 chr20 53963357 53963610 -12704395 + MIR SINE MIR 1 262 0 2200 174 3 0 chr20 53964169 53964531 -12703474 - MER47A DNA MER2_type 0 366 4 316 257 59 40 chr20 53964898 53964999 -12703006 + L2 LINE L2 3121 3223 -49 423 304 124 35 chr20 53965206 53965489 -12702516 + L2 LINE L2 2965 3272 0 2225 119 0 0 chr20 53965494 53965788 -12702217 + AluSx SINE Alu 1 294 -18 2309 118 29 47 chr20 53965865 53966247 -12701758 - THE1C LTR MaLR 0 375 1 1420 292 34 48 chr20 53966359 53966979 -12701026 + L1MC4a LINE L1 5338 5948 -1860 214 241 12 12 chr20 53967168 53967251 -12700754 + GA-rich Low_complexity Low_complexity 1 83 0 21 57 0 0 chr20 53967698 53967733 -12700272 + AT_rich Low_complexity Low_complexity 1 35 0 228 91 0 0 chr20 53968450 53968483 -12699522 - Alu SINE Alu -10 291 259 249 88 0 0 chr20 53968487 53968521 -12699484 + Alu SINE Alu 93 126 -174 324 211 10 19 chr20 53968521 53968625 -12699380 + (TA)n Simple_repeat Simple_repeat 2 104 0 813 244 29 29 chr20 53968723 53968932 -12699073 - MER3 DNA MER1_type 0 209 1 312 289 0 21 chr20 53968944 53969041 -12698964 + MER5A DNA MER1_type 5 99 -90 1198 226 9 0 chr20 53969083 53969304 -12698701 - MER58A DNA MER1_type -1 223 1 1974 140 3 34 chr20 53969531 53969853 -12698152 + AluSx SINE Alu 1 312 0 541 306 39 10 chr20 53970650 53970856 -12697149 + MIR SINE MIR 37 248 -14 398 304 28 33 chr20 53970852 53971033 -12696972 - MIR SINE MIR -49 213 34 * 273 256 56 0 chr20 53971498 53971588 -12696417 + L1ME LINE L1 5583 5677 -444 1571 151 31 74 chr20 53971608 53971932 -12696073 + AluJo SINE Alu 1 310 -2 476 288 105 82 chr20 53972349 53972862 -12695143 + L2 LINE L2 2776 3313 0 24 67 0 0 chr20 53974539 53974584 -12693421 + AT_rich Low_complexity Low_complexity 1 45 0 312 310 52 0 chr20 53975305 53975421 -12692584 + L2 LINE L2 3192 3313 0 240 291 174 0 chr20 53975797 53975883 -12692122 + L2 LINE L2 3169 3269 -3 253 273 50 83 chr20 53975927 53976048 -12691957 + MIR SINE MIR 19 135 -127 366 23 0 0 chr20 53976056 53976099 -12691906 + (TC)n Simple_repeat Simple_repeat 1 43 0 1014 141 18 18 chr20 53976105 53976268 -12691737 + MSTD LTR MaLR 234 396 0 437 273 91 0 chr20 53976352 53976462 -12691543 - MER63A DNA MER1_type -2 208 89 796 212 88 0 chr20 53976470 53976640 -12691365 - MER58A DNA MER1_type -5 219 35 406 209 47 0 chr20 53976665 53976751 -12691254 - MER63A DNA MER1_type 0 92 3 2176 113 3 0 chr20 53976849 53977149 -12690856 + AluSx SINE Alu 1 301 -11 1234 122 0 6 chr20 53977149 53977321 -12690684 + AluSp SINE Alu 134 304 -9 554 259 0 8 chr20 53977346 53977477 -12690528 + LTR16A LTR ERVL 236 365 -85 927 296 31 25 chr20 53977477 53977794 -12690211 + ERVL LTR ERVL 741 1059 -3937 289 254 91 27 chr20 53977943 53978053 -12689952 + ERVL LTR ERVL 4924 5040 -724 863 301 54 0 chr20 53978461 53978720 -12689285 + LTR16A LTR ERVL 178 450 0 455 205 130 25 chr20 53978841 53979002 -12689003 - MIR SINE MIR 0 262 85 309 327 65 0 chr20 53979547 53979654 -12688351 - L2 LINE L2 -8 3305 3192 270 252 112 29 chr20 53979664 53979870 -12688135 + MER113 DNA MER1_type? 8 230 -291 598 289 84 36 chr20 53980015 53980264 -12687741 + MIR SINE MIR 2 262 0 201 311 74 54 chr20 53980292 53980440 -12687565 - L2 LINE L2 -179 3093 2943 892 294 41 44 chr20 53980660 53980737 -12687268 + MLT1K LTR MaLR 212 288 -300 1583 188 93 87 chr20 53980737 53981199 -12686806 - MLT1C LTR MaLR -2 465 1 892 294 41 44 chr20 53981199 53981488 -12686517 + MLT1K LTR MaLR 288 577 -11 27 0 0 0 chr20 53981517 53981544 -12686461 + AT_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr20 53982037 53982059 -12685946 + AT_rich Low_complexity Low_complexity 1 22 0 284 349 56 0 chr20 53983679 53983805 -12684200 + L2 LINE L2 2889 3021 -251 424 288 56 19 chr20 53983994 53984154 -12683851 - MIR SINE MIR -63 199 34 2569 64 0 16 chr20 53984373 53984685 -12683320 + AluY SINE Alu 1 307 -4 655 291 152 19 chr20 53985186 53985547 -12682458 + L2 LINE L2 2890 3298 -15 657 294 52 0 chr20 53986554 53986765 -12681240 - MIR SINE MIR -39 223 2 398 198 0 12 chr20 53986787 53986868 -12681137 + MER116 DNA Mariner 1 80 0 438 291 96 58 chr20 53987777 53987909 -12680096 + L2 LINE L2 2599 2724 -590 2229 123 0 0 chr20 53987909 53988211 -12679794 - AluSx SINE Alu -10 302 1 438 291 96 58 chr20 53988211 53988442 -12679563 + L2 LINE L2 2724 2976 -338 244 317 92 42 chr20 53988501 53988643 -12679362 + L2 LINE L2 3164 3312 -1 2249 93 33 0 chr20 53989466 53989766 -12678239 - AluSx SINE Alu -2 310 1 1762 187 32 6 chr20 53990180 53990495 -12677510 - MLT1A1 LTR MaLR -42 323 1 456 352 102 35 chr20 53990519 53990942 -12677063 - L2 LINE L2 -4 3309 2859 237 327 103 0 chr20 53991288 53991395 -12676610 - L2 LINE L2 -4 3309 3192 1034 191 11 5 chr20 53991398 53991586 -12676419 + MER5A DNA MER1_type 1 189 0 2054 146 3 0 chr20 53992325 53992620 -12675385 - AluSx SINE Alu -16 296 1 837 78 0 61 chr20 53992691 53992806 -12675199 - AluSq SINE Alu -127 186 79 2197 130 0 0 chr20 53992875 53993168 -12674837 + AluSc SINE Alu 1 293 -16 678 228 7 0 chr20 53993261 53993397 -12674608 + MER58B DNA MER1_type 199 335 -6 2278 90 6 26 chr20 53993503 53993814 -12674191 + AluSc SINE Alu 1 305 -4 1322 175 126 71 chr20 53994074 53994399 -12673606 + MER2 DNA MER2_type 2 344 0 1428 29 0 29 chr20 53994911 53995086 -12672919 + L1PA8 LINE L1 6003 6172 0 248 242 15 30 chr20 53995164 53995230 -12672775 - L2 LINE L2 0 3313 3249 * 308 270 0 0 chr20 53995228 53995291 -12672714 + MIR3 SINE MIR 117 179 -29 802 288 23 9 chr20 53995326 53995541 -12672464 + MIR SINE MIR 45 262 0 22 0 0 0 chr20 53995555 53995577 -12672428 + AT_rich Low_complexity Low_complexity 1 22 0 449 251 164 32 chr20 53995836 53996055 -12671950 - MIR SINE MIR -12 250 3 1049 96 198 0 chr20 53997446 53997603 -12670402 - MER5A DNA MER1_type 0 189 2 233 343 45 8 chr20 54000366 54000500 -12667505 - L2 LINE L2 -2 3311 3173 1115 161 21 93 chr20 54000531 54000767 -12667238 + MER20 DNA MER1_type 1 219 0 428 301 89 44 chr20 54001891 54002034 -12665971 + MIR SINE MIR 20 176 -86 243 0 0 0 chr20 54002034 54002061 -12665944 + (TG)n Simple_repeat Simple_repeat 1 27 0 428 301 89 44 chr20 54002061 54002120 -12665885 + MIR SINE MIR 176 231 -31 200 328 88 0 chr20 54002356 54002481 -12665524 + MIR SINE MIR 49 184 -78 386 276 27 15 chr20 54002546 54002793 -12665212 + MLT1I LTR MaLR 102 397 -12 811 167 8 0 chr20 54003602 54003728 -12664277 - MER58A DNA MER1_type 0 156 30 2346 90 3 0 chr20 54003835 54004145 -12663860 - AluY SINE Alu 0 311 1 653 258 114 49 chr20 54004459 54004765 -12663240 - MLT1J LTR MaLR -179 332 7 444 315 81 0 chr20 54004769 54004918 -12663087 + MIR SINE MIR 5 165 -97 307 235 12 24 chr20 54005667 54005752 -12662253 + MIR SINE MIR 173 256 -6 225 0 0 0 chr20 54006547 54006572 -12661433 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1675 171 0 18 chr20 54006578 54006858 -12661147 - AluJo SINE Alu -36 276 2 333 264 16 16 chr20 54007218 54007339 -12660666 + (TA)n Simple_repeat Simple_repeat 1 124 -5 2856 141 2 29 chr20 54007339 54007785 -12660220 - Tigger2a DNA MER2_type 0 434 1 333 264 16 16 chr20 54007785 54007792 -12660213 + (TA)n Simple_repeat Simple_repeat 123 129 0 2594 194 76 4 chr20 54008217 54008251 -12659754 - MLT2B1 LTR ERVL -9 511 481 493 15 30 0 chr20 54008251 54008317 -12659688 + (TAGA)n Simple_repeat Simple_repeat 1 68 0 2594 194 76 4 chr20 54008317 54008757 -12659248 - MLT2B1 LTR ERVL -39 481 3 21 0 0 0 chr20 54009778 54009799 -12658206 + AT_rich Low_complexity Low_complexity 1 21 0 683 265 0 80 chr20 54009812 54009889 -12658116 + MLT1K LTR MaLR 294 376 -212 846 112 84 34 chr20 54009889 54010067 -12657938 - MER53 DNA DNA 0 189 3 683 265 0 80 chr20 54010067 54010189 -12657816 + MLT1K LTR MaLR 376 477 -111 255 125 0 0 chr20 54010223 54010263 -12657742 + (CA)n Simple_repeat Simple_repeat 1 40 0 46 62 0 0 chr20 54010583 54010664 -12657341 + AT_rich Low_complexity Low_complexity 1 81 0 225 190 0 69 chr20 54010888 54010946 -12657059 - LTR67 LTR ERVL -2 555 502 393 179 13 13 chr20 54011403 54011481 -12656524 + LTR50 LTR ERVL 1 78 -717 25 65 0 0 chr20 54011733 54011779 -12656226 + AT_rich Low_complexity Low_complexity 1 46 0 532 271 45 0 chr20 54011958 54012113 -12655892 + MIR SINE MIR 31 192 -70 234 241 0 0 chr20 54012639 54012697 -12655308 + (TTCA)n Simple_repeat Simple_repeat 1 58 0 610 310 29 29 chr20 54012830 54013072 -12654933 - MIR SINE MIR -7 255 14 303 304 72 48 chr20 54013337 54013544 -12654461 - MLT1K LTR MaLR -3 585 374 282 193 0 0 chr20 54014822 54014879 -12653126 + (TG)n Simple_repeat Simple_repeat 1 57 0 249 119 0 0 chr20 54014878 54014920 -12653085 + (GA)n Simple_repeat Simple_repeat 1 42 0 * 2844 82 30 11 chr20 54015134 54015502 -12652503 - THE1C LTR MaLR 0 375 1 21 36 0 0 chr20 54015594 54015622 -12652383 + AT_rich Low_complexity Low_complexity 1 28 0 1150 213 18 5 chr20 54016218 54016439 -12651566 + MER58A DNA MER1_type 1 224 0 26 30 0 0 chr20 54016461 54016494 -12651511 + AT_rich Low_complexity Low_complexity 1 33 0 707 241 102 84 chr20 54016621 54017024 -12650981 - MLT1L LTR MaLR 0 615 206 182 311 27 0 chr20 54017035 54017109 -12650896 + L2 LINE L2 3231 3306 -7 182 281 16 31 chr20 54017232 54017296 -12650709 - MIR3 SINE MIR -45 163 101 401 295 119 24 chr20 54017319 54017529 -12650476 + MLT1K LTR MaLR 16 245 -343 260 254 289 18 chr20 54017564 54017678 -12650327 + MLT1K LTR MaLR 331 475 -113 235 328 107 8 chr20 54017695 54017826 -12650179 - MLT1L LTR MaLR -24 591 448 308 256 136 42 chr20 54017951 54018142 -12649863 - MLT1K LTR MaLR -377 211 3 297 297 10 10 chr20 54018143 54018244 -12649761 + MLT1K LTR MaLR 472 572 -16 450 268 93 27 chr20 54018335 54018518 -12649487 + L2 LINE L2 3105 3299 -14 186 103 0 0 chr20 54018519 54018548 -12649457 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 194 189 108 95 chr20 54018563 54018637 -12649368 - MIR3 SINE MIR -18 190 116 1846 116 119 0 chr20 54019575 54019852 -12648153 + AluSx SINE Alu 1 310 -2 612 206 54 103 chr20 54019879 54019936 -12648069 + MIR SINE MIR 53 111 -151 709 205 111 6 chr20 54019936 54019964 -12648041 + MER5A DNA MER1_type 1 25 -164 234 0 0 0 chr20 54019964 54019990 -12648015 + (CAG)n Simple_repeat Simple_repeat 1 26 0 709 205 111 6 chr20 54019990 54020132 -12647873 + MER5A DNA MER1_type 25 189 0 612 206 54 103 chr20 54020132 54020278 -12647727 + MIR SINE MIR 111 246 -16 485 296 61 35 chr20 54020412 54020642 -12647363 - MIR SINE MIR 0 262 27 22 35 0 0 chr20 54020845 54020874 -12647131 + AT_rich Low_complexity Low_complexity 1 29 0 264 224 199 83 chr20 54022386 54022446 -12645559 + MER5A DNA MER1_type 9 61 -128 2437 65 0 3 chr20 54022446 54022740 -12645265 + AluSg SINE Alu 1 293 -17 264 224 199 83 chr20 54022740 54022835 -12645170 + MER5A DNA MER1_type 61 182 -7 967 198 35 5 chr20 54022851 54023048 -12644957 - MER20 DNA MER1_type -2 217 15 579 282 41 6 chr20 54023054 54023224 -12644781 + MER5A DNA MER1_type 9 184 -5 890 232 46 42 chr20 54023335 54023508 -12644497 + MIR SINE MIR 3 179 -83 1897 162 3 10 chr20 54023508 54023816 -12644189 + AluSx SINE Alu 1 306 -6 890 232 46 42 chr20 54023816 54023901 -12644104 + MIR SINE MIR 179 262 0 265 304 70 26 chr20 54023920 54024035 -12643970 + L2 LINE L2 3136 3255 -17 489 318 67 6 chr20 54024316 54024495 -12643510 - MIR SINE MIR -3 259 70 324 391 9 0 chr20 54024923 54025038 -12642967 - L2 LINE L2 -7 3265 3150 1434 244 7 0 chr20 54025140 54025443 -12642562 + LTR16C LTR ERVL 186 490 -1 225 298 48 10 chr20 54026511 54026615 -12641390 + L2 LINE L2 3005 3112 -160 799 187 72 0 chr20 54026844 54027010 -12640995 - MER5B DNA MER1_type 0 178 1 443 288 122 13 chr20 54027010 54027239 -12640766 - L1ME3A LINE L1 -7 6163 5910 226 341 35 0 chr20 54027279 54027364 -12640641 - L2 LINE L2 -230 3083 2996 1476 187 31 0 chr20 54027473 54027767 -12640238 + AluJo SINE Alu 6 308 -4 249 293 0 0 chr20 54028131 54028189 -12639816 + L2 LINE L2 3248 3305 -8 426 219 53 66 chr20 54028411 54028562 -12639443 - MER5B DNA MER1_type -29 149 1 293 267 91 30 chr20 54028733 54028965 -12639040 + MER113 DNA MER1_type? 1 246 -275 5943 74 8 13 chr20 54028965 54029758 -12638247 - L1PA8 LINE L1 -6 6166 5378 884 193 106 9 chr20 54029758 54029976 -12638029 + MER113 DNA MER1_type? 219 457 -64 209 341 24 24 chr20 54030394 54030479 -12637526 + L2 LINE L2 3185 3269 -3 319 196 29 162 chr20 54031297 54031411 -12636594 - MER5A DNA MER1_type -5 184 99 837 212 185 0 chr20 54031411 54031595 -12636410 + MER20 DNA MER1_type 2 219 0 319 196 29 162 chr20 54031595 54031653 -12636352 - MER5A DNA MER1_type -90 99 35 3787 124 14 15 chr20 54031839 54031907 -12636098 + L1PB3 LINE L1 4834 4901 -1253 2098 165 21 12 chr20 54031907 54032241 -12635764 - MER1B DNA MER1_type 0 337 1 3787 124 14 15 chr20 54032241 54033128 -12634877 + L1PB3 LINE L1 4901 5789 -365 231 222 0 0 chr20 54033130 54033175 -12634830 + (TATATG)n Simple_repeat Simple_repeat 2 46 0 2763 108 5 3 chr20 54033182 54033554 -12634451 + L1PB3 LINE L1 5782 6154 0 370 271 16 41 chr20 54033616 54033738 -12634267 + L2 LINE L2 3142 3260 -12 503 271 125 39 chr20 54033879 54034105 -12633900 - L2 LINE L2 -1 3312 3056 216 0 0 0 chr20 54034105 54034129 -12633876 + (TG)n Simple_repeat Simple_repeat 2 25 0 503 271 125 39 chr20 54034129 54034182 -12633823 - L2 LINE L2 -257 3056 3009 258 301 133 18 chr20 54034205 54034318 -12633687 + L2 LINE L2 3183 3308 -5 250 281 0 0 chr20 54034642 54034706 -12633299 + CT-rich Low_complexity Low_complexity 2 65 0 28 0 0 0 chr20 54034779 54034807 -12633198 + GC_rich Low_complexity Low_complexity 1 28 0 545 183 7 0 chr20 54034987 54035140 -12632865 + (TG)n Simple_repeat Simple_repeat 1 154 0 557 124 10 0 chr20 54035277 54035374 -12632631 + (GGA)n Simple_repeat Simple_repeat 2 99 0 185 169 17 0 chr20 54035527 54035586 -12632419 + A-rich Low_complexity Low_complexity 1 60 0 21 0 0 0 chr20 54037480 54037501 -12630504 + AT_rich Low_complexity Low_complexity 1 21 0 243 79 0 0 chr20 54038084 54038122 -12629883 + (TG)n Simple_repeat Simple_repeat 2 39 0 438 20 0 0 chr20 54040003 54040054 -12627951 + (CA)n Simple_repeat Simple_repeat 2 52 0 21 0 0 0 chr20 54041530 54041551 -12626454 + AT_rich Low_complexity Low_complexity 1 21 0 220 345 12 12 chr20 54043748 54043832 -12624173 + MIR SINE MIR 17 100 -108 415 298 14 28 chr20 54043856 54043997 -12624008 + MIR SINE MIR 16 154 -108 385 317 57 43 chr20 54044431 54044731 -12623274 - L2 LINE L2 0 3313 3010 211 288 144 38 chr20 54044733 54044865 -12623140 - MIR3 SINE MIR -37 171 26 1124 268 42 21 chr20 54045111 54045495 -12622510 - L2 LINE L2 0 3313 2922 417 311 108 7 chr20 54045707 54045910 -12622095 + MIR SINE MIR 11 228 -34 317 296 128 39 chr20 54046775 54047181 -12620824 - L2 LINE L2 -35 3278 2837 464 299 34 44 chr20 54047741 54047945 -12620060 + MIR SINE MIR 20 221 -41 588 245 40 0 chr20 54048018 54048169 -12619836 + MIR SINE MIR 96 252 -10 276 215 114 13 chr20 54048222 54048301 -12619704 + L2 LINE L2 3227 3313 0 729 240 84 50 chr20 54048498 54048691 -12619314 - MER113 DNA MER1_type? -74 447 262 2209 87 6 44 chr20 54048691 54049012 -12618993 + AluSg SINE Alu 1 309 -1 729 240 84 50 chr20 54049012 54049029 -12618976 - MER113 DNA MER1_type? -259 262 247 2205 105 3 0 chr20 54049029 54049323 -12618682 + AluSx SINE Alu 1 295 -17 729 240 84 50 chr20 54049323 54049470 -12618535 - MER113 DNA MER1_type? -274 247 77 274 61 41 0 chr20 54049474 54049523 -12618482 + (TG)n Simple_repeat Simple_repeat 2 52 0 378 250 31 86 chr20 54049806 54049934 -12618071 - MER5A DNA MER1_type -1 188 68 641 58 39 0 chr20 54050026 54050129 -12617876 + (TC)n Simple_repeat Simple_repeat 1 107 0 277 335 145 18 chr20 54050808 54051035 -12616970 - MIR SINE MIR -5 257 2 527 269 54 12 chr20 54052102 54052269 -12615736 + MIR SINE MIR 89 262 0 285 267 11 42 chr20 54052519 54052695 -12615310 - L1ME LINE L1 -299 5822 5687 180 0 0 0 chr20 54053032 54053052 -12614953 + (GGGTG)n Simple_repeat Simple_repeat 3 22 0 203 233 56 11 chr20 54053576 54053666 -12614339 + (TG)n Simple_repeat Simple_repeat 1 94 0 222 62 0 0 chr20 54054823 54054855 -12613150 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 235 319 84 42 chr20 54056692 54056811 -12611194 - L2 LINE L2 -1 3271 3148 187 227 0 0 chr20 54056833 54056877 -12611128 + L2 LINE L2 3229 3272 0 1002 146 0 0 chr20 54056895 54057066 -12610939 + (TGGA)n Simple_repeat Simple_repeat 4 174 0 505 320 59 23 chr20 54057427 54057646 -12610359 - MIR SINE MIR -7 255 29 321 231 103 26 chr20 54057886 54058003 -12610002 - MLT1K LTR MaLR -264 324 199 282 284 37 67 chr20 54058120 54058182 -12609823 + MIR SINE MIR 11 73 -189 2286 109 0 28 chr20 54058182 54058503 -12609502 - AluSx SINE Alu 0 312 1 282 284 37 67 chr20 54058503 54058574 -12609431 + MIR SINE MIR 73 140 -122 414 0 0 0 chr20 54058889 54058935 -12609070 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 567 176 20 0 chr20 54060482 54060584 -12607421 + MER5A DNA MER1_type 9 112 -77 2069 125 3 10 chr20 54060752 54061049 -12606956 - AluSx SINE Alu -17 295 1 415 295 92 52 chr20 54061081 54061386 -12606619 + L2 LINE L2 2997 3313 0 219 287 213 21 chr20 54061808 54061996 -12606009 - L2 LINE L2 -13 3300 3077 367 271 58 58 chr20 54062254 54062409 -12605596 + MER5B DNA MER1_type 17 171 -7 181 188 0 125 chr20 54062432 54062452 -12605553 - MIR SINE MIR 0 262 221 182 179 0 0 chr20 54062452 54062480 -12605525 - L2 LINE L2 -20 3252 3225 646 218 49 39 chr20 54062720 54062941 -12605064 + MER58 DNA MER1_type 1 2420 0 227 267 33 0 chr20 54063126 54063216 -12604789 - MER113 DNA MER1_type? -407 114 22 504 72 0 0 chr20 54063768 54063837 -12604168 + (TG)n Simple_repeat Simple_repeat 2 70 0 362 282 120 37 chr20 54064681 54064897 -12603108 - MIR SINE MIR -13 249 16 194 322 61 26 chr20 54064988 54065103 -12602902 - MIR SINE MIR -60 202 84 44 20 0 0 chr20 54065183 54065234 -12602771 + AT_rich Low_complexity Low_complexity 1 51 0 309 119 99 50 chr20 54065234 54065335 -12602670 + MER53 DNA DNA 9 114 -75 369 0 0 0 chr20 54065837 54065878 -12602127 + (TG)n Simple_repeat Simple_repeat 1 41 0 235 156 47 0 chr20 54066438 54066502 -12601503 + CT-rich Low_complexity Low_complexity 1 67 0 503 247 175 0 chr20 54067371 54067537 -12600468 - MIR SINE MIR 0 262 68 1970 106 11 14 chr20 54067612 54067925 -12600080 + AluSg SINE Alu 1 312 0 260 347 8 25 chr20 54067947 54068068 -12599937 - MIR3 SINE MIR -6 202 84 345 336 14 0 chr20 54069073 54069219 -12598786 - Charlie8 DNA MER1_type -2152 265 118 236 228 279 0 chr20 54069528 54069607 -12598398 - L2 LINE L2 -13 3300 3200 446 322 44 44 chr20 54069674 54069947 -12598058 - L2 LINE L2 -193 3079 2807 599 216 6 0 chr20 54070181 54070343 -12597662 + (TG)n Simple_repeat Simple_repeat 2 164 0 30 0 0 0 chr20 54070437 54070467 -12597538 + AT_rich Low_complexity Low_complexity 1 30 0 1479 161 44 54 chr20 54071347 54071554 -12596451 - Tigger7 DNA MER2_type -10 2577 2370 470 17 17 0 chr20 54071554 54071613 -12596392 + (TC)n Simple_repeat Simple_repeat 1 60 0 1479 161 44 54 chr20 54071613 54071628 -12596377 - Tigger7 DNA MER2_type -217 2370 2356 1690 170 6 44 chr20 54071628 54071945 -12596060 + AluJb SINE Alu 1 305 -7 1479 161 44 54 chr20 54071945 54072038 -12595967 - Tigger7 DNA MER2_type -231 2356 2264 1177 167 0 0 chr20 54072027 54072201 -12595804 - Tigger7 DNA MER2_type -2313 174 1 * 218 236 42 56 chr20 54072757 54072829 -12595176 + MER5A DNA MER1_type 114 184 -5 186 43 0 0 chr20 54073159 54073182 -12594823 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 28 29 0 0 chr20 54073396 54073431 -12594574 + AT_rich Low_complexity Low_complexity 1 35 0 209 239 0 0 chr20 54073791 54073837 -12594168 + MER91 DNA MER1_type 1 46 -144 556 265 74 0 chr20 54074501 54074663 -12593342 - MIR SINE MIR -83 179 6 484 257 182 0 chr20 54074945 54075093 -12592912 + MER5A DNA MER1_type 9 183 -6 240 214 0 0 chr20 54075242 54075298 -12592707 + (CA)n Simple_repeat Simple_repeat 1 56 0 202 300 0 0 chr20 54076227 54076277 -12591728 + L2 LINE L2 3176 3225 -47 374 298 0 8 chr20 54076424 54076545 -12591460 - L2 LINE L2 0 3313 3194 1395 206 60 84 chr20 54076594 54076977 -12591028 - MLT1A2 LTR MaLR 0 374 1 195 316 68 34 chr20 54077027 54077144 -12590861 - L2 LINE L2 -4 3268 3148 292 313 150 48 chr20 54077628 54077897 -12590108 + L2 LINE L2 2881 3204 -109 837 176 131 40 chr20 54077897 54078096 -12589909 + MER20 DNA MER1_type 1 217 -2 292 313 150 48 chr20 54078096 54078219 -12589786 + L2 LINE L2 3204 3313 0 22 0 0 0 chr20 54078524 54078546 -12589459 + AT_rich Low_complexity Low_complexity 1 22 0 490 193 32 79 chr20 54079270 54079396 -12588609 - MLT1I LTR MaLR 0 424 312 352 200 53 27 chr20 54079432 54079507 -12588498 - MLT1J2 LTR MaLR -29 421 345 458 309 72 18 chr20 54079676 54079899 -12588106 - MIR SINE MIR -3 259 25 318 287 51 75 chr20 54080598 54081012 -12586993 - MLT1K LTR MaLR -10 578 124 292 306 45 0 chr20 54081859 54081970 -12586035 + Charlie8 DNA MER1_type 90 205 -2212 424 313 25 45 chr20 54082235 54082436 -12585569 + MIR SINE MIR 66 262 0 2104 126 60 35 chr20 54082443 54082809 -12585196 - THE1C LTR MaLR 0 375 1 697 268 98 5 chr20 54083426 54083650 -12584355 + MIR SINE MIR 18 262 0 825 192 19 0 chr20 54083849 54084005 -12584000 + MER5A DNA MER1_type 31 189 0 188 33 0 33 chr20 54086195 54086225 -12581780 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 3978 67 0 2 chr20 54087079 54087558 -12580447 - L1PA7 LINE L1 -2 6152 5675 369 217 33 65 chr20 54087567 54087751 -12580254 - Charlie7 DNA MER1_type -44 2568 2391 520 236 33 33 chr20 54087833 54088015 -12579990 - Charlie7 DNA MER1_type -258 2354 2173 439 301 56 44 chr20 54088021 54088360 -12579645 - Charlie7 DNA MER1_type -2249 363 21 1107 163 5 5 chr20 54088931 54089115 -12578890 - AluJb SINE Alu -9 303 120 646 201 0 107 chr20 54089438 54089587 -12578418 + AluJo SINE Alu 2 134 -178 357 269 8 37 chr20 54089648 54089782 -12578223 - L1ME LINE L1 -376 5745 5616 314 286 0 11 chr20 54089825 54089916 -12578089 + (TA)n Simple_repeat Simple_repeat 2 91 0 763 154 8 8 chr20 54090238 54090355 -12577650 + FRAM SINE Alu 45 161 -15 245 250 0 0 chr20 54091393 54091445 -12576560 - Charlie8 DNA MER1_type -991 1426 1375 2218 111 0 0 chr20 54091975 54092263 -12575742 + AluSx SINE Alu 1 288 -24 611 278 117 26 chr20 54092591 54092821 -12575184 - MIR SINE MIR -10 252 2 837 239 147 51 chr20 54093248 54093779 -12574226 - L1ME4a LINE L1 -2 6119 5538 459 185 0 0 chr20 54094478 54094570 -12573435 + GA-rich Low_complexity Low_complexity 1 92 0 586 319 39 17 chr20 54095367 54095599 -12572406 + MIR SINE MIR 7 243 -19 539 286 53 5 chr20 54095998 54096187 -12571818 + MIR SINE MIR 64 261 -1 2052 149 0 0 chr20 54096233 54096541 -12571464 - AluSx SINE Alu -4 308 1 251 340 0 0 chr20 54096566 54096663 -12571342 + L2 LINE L2 3217 3313 0 513 255 60 13 chr20 54096753 54096902 -12571103 + MIR SINE MIR 22 177 -85 821 310 126 9 chr20 54096978 54097708 -12570297 - L2 LINE L2 -18 3295 2475 22 0 0 0 chr20 54098135 54098157 -12569848 + AT_rich Low_complexity Low_complexity 1 22 0 298 298 175 0 chr20 54098193 54098307 -12569698 - L2 LINE L2 0 3272 3139 211 244 0 0 chr20 54098851 54098892 -12569113 - L2 LINE L2 -13 3259 3219 229 213 0 0 chr20 54098999 54099046 -12568959 - L1MC4 LINE L1 -1349 6693 6647 194 193 18 0 chr20 54099062 54099119 -12568886 + (CATATA)n Simple_repeat Simple_repeat 6 63 0 300 118 67 22 chr20 54099227 54099362 -12568643 + (TA)n Simple_repeat Simple_repeat 1 141 0 1002 48 0 8 chr20 54100678 54100804 -12567201 + AluSg/x SINE Alu 186 310 0 1800 81 47 0 chr20 54101438 54101727 -12566278 - AluSp SINE Alu 0 340 41 490 227 0 10 chr20 54102032 54102129 -12565876 - L2 LINE L2 -8 3305 3210 1416 118 0 5 chr20 54102168 54102363 -12565642 + AluSg/x SINE Alu 91 284 -28 306 0 0 0 chr20 54102363 54102397 -12565608 + (CA)n Simple_repeat Simple_repeat 2 35 0 2155 113 0 0 chr20 54102407 54102698 -12565307 + AluSc SINE Alu 1 291 -18 467 271 152 9 chr20 54102763 54103058 -12564947 - L2 LINE L2 -260 3053 2718 366 256 184 36 chr20 54103697 54103947 -12564058 - MLT1K LTR MaLR -2 586 300 382 333 22 16 chr20 54103983 54104166 -12563839 - MLT1K LTR MaLR -357 231 48 527 248 76 6 chr20 54104211 54104368 -12563637 - MIR SINE MIR -71 191 24 224 335 93 37 chr20 54105039 54105200 -12562805 - MIR SINE MIR -61 201 32 500 292 111 13 chr20 54105354 54105580 -12562425 + L1MC/D LINE L1 5564 5811 -1997 1016 195 33 14 chr20 54105862 54106072 -12561933 + MER20 DNA MER1_type 6 219 0 1160 187 78 0 chr20 54106668 54106887 -12561118 - MER46A DNA MER2_type 0 236 1 1725 154 44 14 chr20 54107287 54107580 -12560425 - AluJo SINE Alu -10 302 1 21 0 0 0 chr20 54107581 54107602 -12560403 + AT_rich Low_complexity Low_complexity 1 21 0 779 277 147 41 chr20 54107606 54107974 -12560031 - MLT1I LTR MaLR -2 407 1 350 342 87 10 chr20 54108008 54108204 -12559801 + MER102a DNA MER1_type 120 330 0 418 261 190 5 chr20 54108210 54108405 -12559600 + MIR SINE MIR 3 233 -29 349 320 0 0 chr20 54108532 54108632 -12559373 + MIR3 SINE MIR 109 208 0 183 42 0 0 chr20 54109218 54109242 -12558763 + (CAAAA)n Simple_repeat Simple_repeat 3 26 0 218 325 86 18 chr20 54109317 54109480 -12558525 + MIR SINE MIR 79 252 -10 385 212 20 30 chr20 54109645 54109744 -12558261 - MER102a DNA MER1_type -138 192 95 1179 292 39 39 chr20 54109799 54110231 -12557774 - MLT1J LTR MaLR -44 467 36 215 357 31 40 chr20 54110410 54110634 -12557371 - MIR SINE MIR -12 250 29 23 0 0 0 chr20 54111479 54111502 -12556503 + AT_rich Low_complexity Low_complexity 1 23 0 336 345 0 0 chr20 54111566 54111682 -12556323 + MIR SINE MIR 101 216 -46 255 368 25 82 chr20 54111791 54112191 -12555814 + L2 LINE L2 2815 3191 -81 222 263 0 18 chr20 54112256 54112313 -12555692 + GA-rich Low_complexity Low_complexity 4 59 0 2148 114 10 0 chr20 54112383 54112673 -12555332 + AluSx SINE Alu 1 293 -19 243 95 0 0 chr20 54112680 54112722 -12555283 + LTR66 LTR ERVL 398 439 -171 241 98 0 0 chr20 54112710 54112751 -12555254 - LTR66 LTR ERVL -171 439 399 * 327 150 0 0 chr20 54112751 54112811 -12555194 + (TA)n Simple_repeat Simple_repeat 1 60 0 372 270 11 0 chr20 54113520 54113609 -12554396 + MER103 DNA DNA 57 146 -20 2095 134 0 0 chr20 54113638 54113929 -12554076 + AluSq SINE Alu 1 291 -22 357 24 0 0 chr20 54114035 54114077 -12553928 + (CA)n Simple_repeat Simple_repeat 1 42 0 1814 178 0 9 chr20 54114548 54114863 -12553142 - L1MB2 LINE L1 -2 6169 5858 1362 163 0 35 chr20 54114863 54115160 -12552845 + MER1B DNA MER1_type 14 339 0 1332 164 19 65 chr20 54115160 54115422 -12552583 - L1MB2 LINE L1 -294 5877 5628 2172 184 20 44 chr20 54115448 54115904 -12552101 - L1MB7 LINE L1 -11 6173 5729 261 139 0 0 chr20 54116139 54116182 -12551823 + (TA)n Simple_repeat Simple_repeat 2 44 0 185 244 0 0 chr20 54117082 54117123 -12550882 - MIR3 SINE MIR -7 201 161 420 261 76 38 chr20 54117212 54117396 -12550609 + MER69 DNA AcHobo 74 264 -2262 774 250 52 10 chr20 54117430 54117622 -12550383 - Charlie8 DNA MER1_type -2139 278 79 397 313 55 55 chr20 54118170 54118345 -12549660 + L2 LINE L2 2920 3097 -216 1141 246 0 0 chr20 54118345 54118565 -12549440 + MER58A DNA MER1_type 1 220 -4 397 313 55 55 chr20 54118565 54118699 -12549306 + L2 LINE L2 3096 3229 -84 2641 100 40 3 chr20 54119488 54119839 -12548166 + THE1B LTR MaLR 1 364 0 227 301 68 14 chr20 54120296 54120369 -12547636 - L2 LINE L2 -54 3218 3142 1865 186 12 32 chr20 54120517 54120861 -12547144 - MER1B DNA MER1_type 0 337 1 862 184 101 0 chr20 54120999 54121157 -12546848 - MER45A DNA AcHobo -4 174 1 385 261 112 8 chr20 54124748 54124882 -12543123 + MIR SINE MIR 104 251 -11 4485 135 101 29 chr20 54125097 54125887 -12542118 - Tigger1 DNA MER2_type -1571 847 1 690 155 7 84 chr20 54127101 54127256 -12540749 + FRAM SINE Alu 1 40 0 341 296 20 40 chr20 54127629 54127781 -12540224 + MIR SINE MIR 60 208 -54 274 263 20 61 chr20 54127880 54127979 -12540026 + MIR SINE MIR 80 174 -88 2023 84 42 0 chr20 54129078 54129380 -12538625 - AluSc SINE Alu 0 320 8 1686 186 75 81 chr20 54130358 54130827 -12537178 - MLT1C LTR MaLR 0 467 2 221 224 20 0 chr20 54131233 54131282 -12536723 + L2 LINE L2 3264 3313 0 188 167 21 0 chr20 54131537 54131585 -12536420 + A-rich Low_complexity Low_complexity 2 50 0 432 0 0 0 chr20 54132244 54132292 -12535713 + (CA)n Simple_repeat Simple_repeat 2 49 0 237 108 0 0 chr20 54133222 54133259 -12534746 + (TG)n Simple_repeat Simple_repeat 2 38 0 801 211 27 11 chr20 54134505 54134690 -12533315 + MER20 DNA MER1_type 32 219 0 188 277 36 36 chr20 54135065 54135148 -12532857 + MIR3 SINE MIR 85 167 -41 846 170 0 5 chr20 54135450 54136030 -12531975 + (TCCA)n Simple_repeat Simple_repeat 1 576 0 393 267 85 34 chr20 54136030 54136206 -12531799 + HAL1b LINE L1 1162 1346 -2 287 340 0 38 chr20 54136702 54136808 -12531197 + L2 LINE L2 2985 3086 -186 384 260 137 44 chr20 54137326 54137530 -12530475 - MIR SINE MIR -27 235 13 247 287 49 25 chr20 54138131 54138253 -12529752 - L2 LINE L2 -352 2962 2838 367 288 9 9 chr20 54138273 54138384 -12529621 + MER81 DNA DNA 1 111 -3 427 295 33 0 chr20 54138517 54138639 -12529366 + MIR3 SINE MIR 72 197 -11 342 337 87 6 chr20 54138678 54138850 -12529155 - L2 LINE L2 -571 2743 2558 418 215 262 0 chr20 54138958 54139065 -12528940 - L2 LINE L2 0 3272 3138 180 301 102 78 chr20 54139630 54139712 -12528293 - L2 LINE L2 -999 2315 2236 1978 145 7 0 chr20 54139712 54140009 -12527996 + AluSx SINE Alu 1 299 -13 180 301 102 78 chr20 54140009 54140348 -12527657 - L2 LINE L2 -1078 2236 1884 226 209 0 60 chr20 54140906 54140973 -12527032 - L1ME4a LINE L1 -3 6118 6056 186 250 0 0 chr20 54140976 54141016 -12526989 + L2 LINE L2 3265 3304 -9 769 319 173 22 chr20 54141103 54141952 -12526053 - L2 LINE L2 -552 2762 1786 301 262 60 143 chr20 54142273 54142525 -12525480 - MIR SINE MIR -4 258 28 192 269 58 0 chr20 54142683 54142735 -12525270 + MIR SINE MIR 184 238 -24 2186 135 18 26 chr20 54143041 54143381 -12524624 - MER1B DNA MER1_type 0 337 1 1723 156 10 53 chr20 54143608 54143910 -12524095 - AluJo SINE Alu -23 289 1 462 95 0 0 chr20 54144472 54144535 -12523470 - Alu SINE Alu -7 302 240 278 269 45 0 chr20 54144545 54144612 -12523393 - MIR SINE MIR -108 154 85 421 306 45 15 chr20 54146190 54146324 -12521681 + MIR SINE MIR 51 188 -74 30 27 0 0 chr20 54146567 54146604 -12521401 + AT_rich Low_complexity Low_complexity 1 37 0 768 119 0 0 chr20 54147204 54147322 -12520683 + (TCCC)n Simple_repeat Simple_repeat 4 121 0 277 287 43 11 chr20 54147502 54147596 -12520409 + MIR SINE MIR 71 167 -95 2027 116 3 14 chr20 54147661 54147955 -12520050 + AluSq SINE Alu 2 292 -21 207 100 0 0 chr20 54147955 54147985 -12520020 + (GA)n Simple_repeat Simple_repeat 1 30 0 484 262 213 20 chr20 54148135 54148337 -12519668 - MIR SINE MIR -13 249 9 527 284 79 50 chr20 54149382 54149685 -12518320 - L2 LINE L2 -40 3273 2962 442 316 8 8 chr20 54150780 54150913 -12517092 - L2 LINE L2 -1 3312 3180 213 39 0 0 chr20 54151897 54151923 -12516082 + (T)n Simple_repeat Simple_repeat 1 26 0 577 323 136 25 chr20 54152051 54152404 -12515601 - L2 LINE L2 0 3313 2922 2021 183 38 28 chr20 54152426 54152972 -12515033 - MLT2A2 LTR ERVL 0 554 1 22 35 0 0 chr20 54153508 54153537 -12514468 + AT_rich Low_complexity Low_complexity 1 29 0 1657 188 0 13 chr20 54154341 54154645 -12513360 + AluJo SINE Alu 1 300 -12 900 207 91 0 chr20 54155400 54155598 -12512407 - MER58A DNA MER1_type 0 224 9 397 330 46 9 chr20 54155629 54155847 -12512158 + MIR SINE MIR 29 254 -8 311 329 198 21 chr20 54155891 54156245 -12511760 + L2 LINE L2 2639 3048 -265 378 297 0 30 chr20 54156295 54156396 -12511609 + L2 LINE L2 3173 3270 -2 24 0 0 0 chr20 54156570 54156594 -12511411 + AT_rich Low_complexity Low_complexity 1 24 0 1208 233 5 0 chr20 54156595 54156818 -12511187 + MER58A DNA MER1_type 1 224 0 1086 312 92 22 chr20 54157591 54158133 -12509872 - MLT1K LTR MaLR 0 588 9 1035 126 117 53 chr20 54158211 54158417 -12509588 - MER20 DNA MER1_type 0 219 1 227 31 31 0 chr20 54158706 54158738 -12509267 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 2099 120 0 3 chr20 54158741 54159024 -12508981 - AluSx SINE Alu -30 282 1 2109 108 10 16 chr20 54159269 54159635 -12508370 + AluSq SINE Alu 1 364 0 807 226 55 17 chr20 54159635 54159816 -12508189 - MER20 DNA MER1_type 0 219 32 1102 85 4 183 chr20 54160321 54160556 -12507449 + 7SK RNA RNA 1 193 0 212 260 178 0 chr20 54160788 54160861 -12507144 + MIR SINE MIR 2 87 -175 204 233 0 0 chr20 54160860 54160903 -12507102 + L2 LINE L2 3264 3306 -7 * 2346 127 33 28 chr20 54162195 54162557 -12505448 - THE1B LTR MaLR 0 364 1 300 352 9 0 chr20 54162798 54162903 -12505102 - MIR SINE MIR -141 121 16 239 133 22 0 chr20 54165065 54165110 -12502895 + A-rich Low_complexity Low_complexity 1 46 0 * 410 167 12 0 chr20 54165104 54165188 -12502817 + G-rich Low_complexity Low_complexity 3 87 0 576 262 116 43 chr20 54165468 54165539 -12502466 - MER112 DNA MER1_type -6 254 190 932 10 0 0 chr20 54165539 54165641 -12502364 - L1PA2 LINE L1 -1 6154 6053 576 262 116 43 chr20 54165641 54165802 -12502203 - MER112 DNA MER1_type -70 190 5 939 230 25 0 chr20 54167949 54168153 -12499852 - MER20 DNA MER1_type -5 214 6 1812 175 0 13 chr20 54168302 54168617 -12499388 - AluJb SINE Alu -1 311 1 2187 160 66 16 chr20 54168620 54169044 -12498961 - L1MA6 LINE L1 0 6300 5856 2500 57 20 0 chr20 54169061 54169360 -12498645 - AluY SINE Alu 0 311 7 2243 103 7 0 chr20 54169366 54169666 -12498339 - AluSx SINE Alu -10 302 1 642 258 44 39 chr20 54169888 54170070 -12497935 + MIR SINE MIR 3 185 -77 330 283 26 72 chr20 54170715 54170867 -12497138 - MER5A DNA MER1_type -37 152 8 216 171 0 0 chr20 54171719 54171760 -12496245 + CT-rich Low_complexity Low_complexity 2 42 0 537 214 48 0 chr20 54171828 54171954 -12496051 + MIR SINE MIR 112 243 -19 219 36 0 0 chr20 54172555 54172583 -12495422 + (CAGCT)n Simple_repeat Simple_repeat 4 31 0 418 290 93 58 chr20 54172594 54172863 -12495142 + Charlie8 DNA MER1_type 1 290 -2127 216 0 0 0 chr20 54173402 54173426 -12494579 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 185 287 93 62 chr20 54173491 54173749 -12494256 - L2 LINE L2 -908 2406 2141 196 356 0 0 chr20 54173912 54173971 -12494034 - L2 LINE L2 0 3272 3214 1005 224 242 6 chr20 54173993 54174323 -12493682 - MLT1I LTR MaLR 0 409 2 1057 191 127 153 chr20 54174441 54175042 -12492963 - MER45C DNA AcHobo -342 611 27 1614 168 53 33 chr20 54175188 54175491 -12492514 - AluJb SINE Alu -3 309 1 936 191 0 35 chr20 54176618 54176791 -12491214 + FRAM SINE Alu 4 170 -6 443 327 77 15 chr20 54176954 54177180 -12490825 + MIR SINE MIR 18 257 -5 369 293 143 67 chr20 54177749 54177904 -12490101 - L2 LINE L2 0 3313 3171 2948 93 0 6 chr20 54177904 54178268 -12489737 + THE1B LTR MaLR 3 364 0 369 293 143 67 chr20 54178268 54178470 -12489535 - L2 LINE L2 -142 3171 2929 303 175 0 63 chr20 54178745 54178808 -12489197 + MIR SINE MIR 105 163 -99 830 205 49 148 chr20 54179490 54179895 -12488110 - MLT1A1 LTR MaLR 0 365 1 526 357 146 9 chr20 54180011 54180353 -12487652 - L2 LINE L2 0 3313 2925 1184 241 50 65 chr20 54180999 54181442 -12486563 - LTR16A1 LTR ERVL 0 457 22 2265 147 96 10 chr20 54181442 54181836 -12486169 - MSTA LTR MaLR 0 428 1 187 346 0 0 chr20 54181934 54181986 -12486019 - L2 LINE L2 0 3272 3221 1161 243 70 3 chr20 54182163 54182463 -12485542 + MER33 DNA MER1_type 1 320 -4 696 257 76 56 chr20 54184162 54184450 -12483555 - MER102b DNA MER1_type -47 294 1 1821 172 0 7 chr20 54184681 54184989 -12483016 + AluJb SINE Alu 1 306 -6 313 216 59 183 chr20 54185878 54186234 -12481771 - MLT1H LTR MaLR -1 548 237 303 359 75 13 chr20 54186402 54186561 -12481444 - MIR SINE MIR -92 170 2 354 287 92 56 chr20 54187313 54187508 -12480497 - MIR SINE MIR -1 261 60 1159 167 48 0 chr20 54187534 54187720 -12480285 - MER58A DNA MER1_type -2 222 28 421 277 7 47 chr20 54187722 54187870 -12480135 + MIR SINE MIR 71 212 -50 716 281 20 10 chr20 54187968 54188164 -12479841 + MIR SINE MIR 44 241 -21 1777 231 39 9 chr20 54188262 54188695 -12479310 - Charlie4a DNA MER1_type 0 508 63 289 256 35 0 chr20 54189679 54189765 -12478240 + GA-rich Low_complexity Low_complexity 3 91 0 501 324 52 55 chr20 54189855 54190098 -12477907 - L2 LINE L2 -2 3311 3068 697 206 0 16 chr20 54190098 54190224 -12477781 + FLAM_C SINE Alu 1 124 -9 501 324 52 55 chr20 54190224 54190323 -12477682 - L2 LINE L2 -245 3068 2970 * 557 310 18 22 chr20 54190321 54190550 -12477455 - MIR SINE MIR -6 256 29 2195 111 0 0 chr20 54191308 54191597 -12476408 - AluSg SINE Alu -21 289 1 410 326 59 0 chr20 54191603 54191842 -12476163 + L1ME LINE L1 5517 5769 -352 238 227 0 0 chr20 54191880 54191924 -12476081 + MER113 DNA MER1_type? 1 44 -477 446 137 0 0 chr20 54191954 54192027 -12475978 - L1MA2 LINE L1 0 6304 6232 209 83 28 0 chr20 54192908 54192944 -12475061 + (GAAAA)n Simple_repeat Simple_repeat 3 39 0 1822 166 0 7 chr20 54193018 54193308 -12474697 + AluSx SINE Alu 1 288 -24 237 326 21 11 chr20 54193378 54193473 -12474532 + MIR SINE MIR 2 97 -165 328 298 39 0 chr20 54193511 54193615 -12474390 + MIR SINE MIR 37 144 -118 252 289 0 22 chr20 54194596 54194686 -12473319 + GA-rich Low_complexity Low_complexity 1 88 0 1723 113 120 8 chr20 54194988 54195254 -12472751 - AluSg SINE Alu -14 296 1 23 54 0 0 chr20 54196268 54196305 -12471700 + AT_rich Low_complexity Low_complexity 1 37 0 196 235 0 59 chr20 54196770 54196821 -12471184 + MIR SINE MIR 98 145 -63 501 84 0 0 chr20 54197644 54197715 -12470290 + (CA)n Simple_repeat Simple_repeat 2 72 0 928 335 10 10 chr20 54197825 54198237 -12469768 - L1ME1 LINE L1 -15 6151 5740 1654 156 3 35 chr20 54198268 54198581 -12469424 - AluJo SINE Alu 0 306 3 1845 146 181 27 chr20 54198621 54198992 -12469013 - MSTC LTR MaLR 0 428 1 317 331 38 12 chr20 54199124 54199284 -12468721 - MIR SINE MIR -8 254 91 256 350 57 41 chr20 54200214 54200460 -12467545 + L2 LINE L2 2479 2728 -586 303 224 91 73 chr20 54200547 54200712 -12467293 - MER113 DNA MER1_type? -353 168 1 2431 65 0 10 chr20 54200770 54201076 -12466929 + AluY SINE Alu 1 303 -8 245 324 113 81 chr20 54201236 54201582 -12466423 + L2 LINE L2 2914 3270 -2 408 352 55 0 chr20 54201848 54201993 -12466012 + L2 LINE L2 3117 3269 -3 549 235 29 22 chr20 54202682 54202818 -12465187 - L2 LINE L2 0 3272 3136 215 143 52 52 chr20 54202837 54202914 -12465091 + (TATAA)n Simple_repeat Simple_repeat 2 78 0 2525 55 0 0 chr20 54202928 54203221 -12464784 + AluY SINE Alu 1 293 -18 734 226 125 93 chr20 54204747 54205155 -12462850 - MLT1K LTR MaLR -17 571 151 2378 54 4 0 chr20 54206067 54206373 -12461632 + AluY SINE Alu 1 307 0 4400 128 8 65 chr20 54206418 54207151 -12460854 - LTR8 LTR ERV1 0 691 1 827 251 74 4 chr20 54207156 54207399 -12460606 - MIR SINE MIR 0 262 3 32 0 0 0 chr20 54207494 54207526 -12460479 + AT_rich Low_complexity Low_complexity 1 32 0 1411 251 23 6 chr20 54208047 54208397 -12459608 - LTR16C LTR ERVL 0 491 136 218 338 25 0 chr20 54208506 54208586 -12459419 + MIR SINE MIR 144 225 -37 239 230 0 68 chr20 54208620 54208694 -12459311 - MLT1K LTR MaLR -74 514 446 2022 122 4 0 chr20 54210365 54210673 -12457332 - AluSg SINE Alu 0 309 1 986 234 23 0 chr20 54210896 54211110 -12456895 + MER20 DNA MER1_type 1 219 0 801 264 67 5 chr20 54212699 54212907 -12455098 - MIR SINE MIR -29 233 13 463 257 40 0 chr20 54213022 54213123 -12454882 + MER58 DNA MER1_type 1 105 -2315 * 720 142 9 0 chr20 54213118 54213231 -12454774 + MER58 DNA MER1_type 2287 2400 -20 216 0 0 0 chr20 54213274 54213298 -12454707 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 432 171 38 0 chr20 54213310 54213415 -12454590 + GA-rich Low_complexity Low_complexity 3 111 0 849 275 62 28 chr20 54214065 54214389 -12453616 - MER46C DNA MER2_type 0 338 4 417 202 30 20 chr20 54214756 54214855 -12453150 + MER104 DNA Tc2 14 113 -67 579 217 0 0 chr20 54214984 54215136 -12452869 + (CCCTAA)n Simple_repeat Simple_repeat 3 154 0 252 318 100 0 chr20 54215161 54215271 -12452734 - Charlie8 DNA MER1_type -2202 215 95 359 314 57 61 chr20 54215468 54215713 -12452292 - L2 LINE L2 -102 3170 2927 260 344 16 8 chr20 54216096 54216218 -12451787 - LTR67 LTR ERVL -7 550 428 1252 265 47 10 chr20 54216394 54216801 -12451204 - MLT1H LTR MaLR -8 541 40 22 35 0 0 chr20 54217052 54217081 -12450924 + AT_rich Low_complexity Low_complexity 1 29 0 302 358 45 6 chr20 54217345 54217521 -12450484 + MIR SINE MIR 69 251 -11 207 0 0 0 chr20 54217712 54217735 -12450270 + (T)n Simple_repeat Simple_repeat 1 23 0 259 326 29 7 chr20 54217883 54218021 -12449984 - LTR33 LTR ERVL -15 506 366 401 303 55 0 chr20 54218088 54218253 -12449752 - LTR33 LTR ERVL -347 174 1 680 263 132 61 chr20 54218580 54219006 -12448999 + Charlie8 DNA MER1_type 57 512 -1905 302 320 77 26 chr20 54219122 54219278 -12448727 - MIR SINE MIR -51 211 48 1125 155 0 0 chr20 54220067 54220228 -12447777 - FRAM SINE Alu -11 165 5 751 300 119 29 chr20 54220456 54221192 -12446813 - L2 LINE L2 0 3313 2518 238 305 45 39 chr20 54221424 54221578 -12446427 + L2 LINE L2 2560 2714 -600 561 261 0 12 chr20 54221578 54221739 -12446266 + MER113 DNA MER1_type? 92 250 -271 269 259 23 0 chr20 54221759 54221860 -12446145 - MIR SINE MIR -63 145 77 1442 185 0 0 chr20 54221941 54222163 -12445842 + MER58A DNA MER1_type 3 224 0 453 350 127 42 chr20 54222442 54222928 -12445077 - L2 LINE L2 -1 3271 2740 1831 143 86 0 chr20 54223148 54223427 -12444578 + AluSx SINE Alu 1 303 -9 233 271 17 0 chr20 54223747 54223806 -12444199 - MLT1K LTR MaLR -12 576 517 320 324 155 24 chr20 54223824 54224105 -12443900 - L2 LINE L2 -248 3065 2736 2017 155 29 29 chr20 54224105 54224480 -12443525 - THE1C LTR MaLR 0 375 1 320 324 155 24 chr20 54224480 54224537 -12443468 - L2 LINE L2 -577 2736 2688 * 490 299 78 5 chr20 54224532 54224736 -12443269 - MIR SINE MIR -11 251 33 502 305 26 0 chr20 54225859 54226010 -12441995 + MLT1F1 LTR MaLR 30 184 -409 216 0 0 0 chr20 54226034 54226058 -12441947 + (T)n Simple_repeat Simple_repeat 1 24 0 300 27 0 0 chr20 54226103 54226140 -12441865 + (TTTTA)n Simple_repeat Simple_repeat 4 40 0 1134 0 0 0 chr20 54226140 54226261 -12441744 - L1HS LINE L1 -16 6139 6019 1010 224 187 28 chr20 54226261 54226587 -12441418 + MLT1F1 LTR MaLR 190 567 0 428 264 78 87 chr20 54226588 54227038 -12440967 - L1ME4a LINE L1 -224 5897 5452 756 191 106 11 chr20 54227168 54227356 -12440649 + MER3 DNA MER1_type 2 207 -2 521 109 0 22 chr20 54227727 54227819 -12440186 + (TGGA)n Simple_repeat Simple_repeat 4 93 0 392 276 98 52 chr20 54227828 54228002 -12440003 - MIR SINE MIR 0 262 81 181 305 37 24 chr20 54228914 54228996 -12439009 - L2 LINE L2 0 3313 3231 848 174 0 0 chr20 54229006 54229138 -12438867 + FLAM_C SINE Alu 1 132 -11 2161 143 0 0 chr20 54229159 54229467 -12438538 + AluSx SINE Alu 1 308 -4 682 299 79 46 chr20 54229471 54229924 -12438081 - L2 LINE L2 -78 3235 2766 621 333 54 0 chr20 54229950 54230172 -12437833 - MIR SINE MIR -27 235 2 300 70 0 0 chr20 54230234 54230277 -12437728 + (TG)n Simple_repeat Simple_repeat 2 44 0 748 218 87 24 chr20 54230830 54231036 -12436969 - MER20 DNA MER1_type 0 219 1 328 182 281 46 chr20 54231263 54231431 -12436574 - MLT1J2 LTR MaLR 0 450 249 188 318 68 34 chr20 54231705 54231793 -12436212 - MER5A DNA MER1_type -55 134 44 305 191 71 12 chr20 54232202 54232286 -12435719 + L2 LINE L2 3225 3313 0 317 283 23 40 chr20 54232468 54232641 -12435364 + (TATATG)n Simple_repeat Simple_repeat 1 170 0 332 340 9 9 chr20 54232729 54232863 -12435142 - MIR SINE MIR -71 137 4 688 193 5 116 chr20 54233129 54233336 -12434669 - MER20 DNA MER1_type 0 219 36 259 254 0 0 chr20 54233580 54233647 -12434358 + A-rich Low_complexity Low_complexity 1 67 0 25 0 0 0 chr20 54234350 54234375 -12433630 + AT_rich Low_complexity Low_complexity 1 25 0 198 0 0 0 chr20 54235071 54235093 -12432912 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 673 250 13 0 chr20 54235310 54235462 -12432543 - MIR SINE MIR -77 185 32 422 270 108 34 chr20 54235567 54235715 -12432290 + MIR SINE MIR 19 177 -85 192 125 0 0 chr20 54235866 54235898 -12432107 + (TAAAA)n Simple_repeat Simple_repeat 4 35 0 2220 97 0 3 chr20 54235996 54236286 -12431719 + AluSg SINE Alu 1 289 -21 198 103 0 0 chr20 54236396 54236425 -12431580 + (TAGG)n Simple_repeat Simple_repeat 3 31 0 195 167 0 0 chr20 54236637 54236679 -12431326 + (CA)n Simple_repeat Simple_repeat 2 43 0 191 313 162 0 chr20 54237157 54237256 -12430749 + MIR SINE MIR 40 154 -108 213 121 0 0 chr20 54237766 54237799 -12430206 + (TTC)n Simple_repeat Simple_repeat 2 34 0 2314 87 10 3 chr20 54237801 54238110 -12429895 - AluSq SINE Alu -2 311 1 534 246 87 33 chr20 54238501 54238684 -12429321 - L2 LINE L2 -3 3310 3118 2385 107 0 0 chr20 54239345 54239654 -12428351 - AluSc SINE Alu 0 309 1 829 146 0 29 chr20 54239716 54239853 -12428152 - FLAM_C SINE Alu -10 133 1 419 286 201 0 chr20 54240031 54240185 -12427820 - MER5A DNA MER1_type -1 188 4 967 207 47 39 chr20 54240222 54240478 -12427527 + ORSL DNA AcHobo 1 258 -17 312 230 278 0 chr20 54240527 54240653 -12427352 + MIR SINE MIR 101 261 -1 519 177 9 35 chr20 54243334 54243447 -12424558 + L1PB4 LINE L1 6047 6156 0 403 308 104 32 chr20 54243736 54244044 -12423961 + L2 LINE L2 2969 3298 -15 1966 64 0 0 chr20 54244275 54244511 -12423494 + AluY SINE Alu 1 236 -75 522 184 5 49 chr20 54244764 54244949 -12423056 + CT-rich Low_complexity Low_complexity 4 180 0 195 100 0 0 chr20 54245004 54245034 -12422971 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 363 267 0 12 chr20 54246901 54246987 -12421018 - L2 LINE L2 -1 3271 3187 238 224 235 33 chr20 54247164 54247336 -12420669 - L1ME4a LINE L1 -69 6052 5840 1817 133 3 30 chr20 54247336 54247636 -12420369 - AluSx SINE Alu 0 312 21 297 275 156 33 chr20 54247639 54247850 -12420155 - L1MC4 LINE L1 -299 7743 7507 1241 107 254 48 chr20 54248040 54248292 -12419713 + AluSg1 SINE Alu 1 304 -5 432 294 123 11 chr20 54248781 54248968 -12419037 - MER63A DNA MER1_type -2 208 1 207 368 43 37 chr20 54248980 54249143 -12418862 - MER5A DNA MER1_type -4 185 22 25 0 0 0 chr20 54249545 54249570 -12418435 + AT_rich Low_complexity Low_complexity 1 25 0 493 254 113 40 chr20 54251493 54251670 -12416335 - MIR SINE MIR -7 255 66 294 298 89 54 chr20 54251906 54252074 -12415931 - MER102a DNA MER1_type -15 315 142 273 152 36 196 chr20 54252113 54252225 -12415780 + MIR SINE MIR 147 240 -22 325 314 99 8 chr20 54252266 54252387 -12415618 + L2 LINE L2 3141 3272 0 1822 175 0 3 chr20 54252448 54252733 -12415272 + AluJb SINE Alu 1 284 -28 378 0 0 0 chr20 54252733 54252775 -12415230 + (TA)n Simple_repeat Simple_repeat 2 43 0 183 205 0 0 chr20 54253766 54253805 -12414200 + (CATATA)n Simple_repeat Simple_repeat 4 42 0 2066 138 0 0 chr20 54254017 54254307 -12413698 + AluSx SINE Alu 1 290 -22 25 0 0 0 chr20 54254637 54254662 -12413343 + AT_rich Low_complexity Low_complexity 1 25 0 417 289 9 0 chr20 54254709 54254823 -12413182 - MIR SINE MIR -83 179 65 289 322 56 0 chr20 54254981 54255071 -12412934 + L2 LINE L2 3161 3255 -17 237 65 0 0 chr20 54255803 54255834 -12412171 + (A)n Simple_repeat Simple_repeat 1 31 0 289 295 62 62 chr20 54256128 54256257 -12411748 + L2 LINE L2 3129 3257 -15 214 200 0 0 chr20 54257898 54257938 -12410067 + (TA)n Simple_repeat Simple_repeat 2 41 0 225 0 0 0 chr20 54259002 54259027 -12408978 + (A)n Simple_repeat Simple_repeat 1 25 0 22 0 0 0 chr20 54259940 54259962 -12408043 + AT_rich Low_complexity Low_complexity 1 22 0 475 335 58 0 chr20 54261009 54261182 -12406823 - MIR SINE MIR -51 211 29 247 339 69 31 chr20 54261262 54261392 -12406613 - MIR3 SINE MIR -18 190 56 1744 145 88 3 chr20 54261850 54262133 -12405872 + AluSx SINE Alu 1 307 -5 968 224 51 58 chr20 54262180 54262475 -12405530 - MLT1E3 LTR MaLR -331 293 1 275 274 103 17 chr20 54262475 54262592 -12405413 + MIR SINE MIR 117 243 -19 366 297 52 13 chr20 54262903 54263058 -12404947 - L2 LINE L2 -322 2991 2831 261 0 0 0 chr20 54263283 54263312 -12404693 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 655 257 13 18 chr20 54263429 54263655 -12404350 + L1MC5 LINE L1 7696 7920 -41 352 313 69 14 chr20 54263670 54263814 -12404191 - L2 LINE L2 -467 2847 2696 2161 232 39 8 chr20 54263815 54264303 -12403702 - MLT1D LTR MaLR -2 503 1 983 164 5 82 chr20 54264332 54264539 -12403466 - MER20 DNA MER1_type -3 216 26 205 328 47 0 chr20 54264555 54264619 -12403386 - L2 LINE L2 -736 2578 2512 409 310 112 33 chr20 54265107 54265349 -12402656 - MIR SINE MIR 0 262 2 1985 110 11 0 chr20 54265826 54266089 -12401916 - AluSx SINE Alu -9 303 38 591 223 62 104 chr20 54266127 54266436 -12401569 - MER102b DNA MER1_type -2 339 44 571 245 38 19 chr20 54266495 54266654 -12401351 + MER33 DNA MER1_type 1 162 -162 211 148 16 16 chr20 54266663 54266724 -12401281 + (TTATA)n Simple_repeat Simple_repeat 2 62 0 297 186 81 24 chr20 54266730 54266854 -12401151 + (ATATG)n Simple_repeat Simple_repeat 3 133 0 188 167 128 0 chr20 54266872 54267028 -12400977 + (ATATG)n Simple_repeat Simple_repeat 3 178 0 674 211 6 19 chr20 54267030 54267191 -12400814 + MER33 DNA MER1_type 205 363 0 443 296 25 91 chr20 54267240 54267406 -12400599 - MIR SINE MIR 0 262 119 2230 75 7 42 chr20 54267406 54267713 -12400292 + AluSg SINE Alu 1 296 -14 443 296 25 91 chr20 54267713 54267820 -12400185 - MIR SINE MIR -143 119 7 406 297 19 108 chr20 54268400 54268545 -12399460 + MIR SINE MIR 9 123 -139 2215 97 3 7 chr20 54268545 54268843 -12399162 + AluSg SINE Alu 1 297 -13 406 297 19 108 chr20 54268843 54268956 -12399049 + MIR SINE MIR 123 244 -18 1469 195 0 69 chr20 54270272 54270465 -12397540 - AluJo SINE Alu -1 311 126 207 0 0 0 chr20 54270465 54270488 -12397517 + (T)n Simple_repeat Simple_repeat 1 23 0 1469 195 0 69 chr20 54270488 54270606 -12397399 - AluJo SINE Alu -186 126 1 516 260 42 23 chr20 54271163 54271374 -12396631 - MIR SINE MIR -1 261 52 2115 112 28 0 chr20 54271707 54271993 -12396012 - AluSx SINE Alu -18 294 1 3722 164 55 16 chr20 54272655 54273393 -12394612 - LTR1B LTR ERV1 0 785 1 728 180 27 33 chr20 54273674 54273857 -12394148 - MIR SINE MIR -2 260 79 329 182 152 20 chr20 54273974 54274073 -12393932 - ORSL DNA AcHobo -24 251 140 751 226 13 0 chr20 54274182 54274341 -12393664 + FRAM SINE Alu 7 167 -9 750 243 75 0 chr20 54274359 54274532 -12393473 - L1PB4 LINE L1 -3 6153 5968 459 297 115 48 chr20 54275168 54275668 -12392337 - MLT1K LTR MaLR 0 588 16 252 59 0 0 chr20 54276173 54276207 -12391798 + (GA)n Simple_repeat Simple_repeat 1 34 0 190 333 63 0 chr20 54276525 54276588 -12391417 - L2 LINE L2 -10 3262 3196 445 265 34 102 chr20 54276751 54277039 -12390966 - L2 LINE L2 -15 3298 3033 1545 175 7 40 chr20 54277039 54277342 -12390663 + AluSx SINE Alu 9 301 -11 445 265 34 102 chr20 54277342 54277378 -12390627 - L2 LINE L2 -280 3033 2996 2436 74 3 16 chr20 54278192 54278503 -12389502 + AluSp SINE Alu 1 307 -6 293 340 10 0 chr20 54279373 54279473 -12388532 - L3 LINE CR1 -418 1159 1059 215 213 0 0 chr20 54279968 54280015 -12387990 - MIR SINE MIR -108 154 108 242 333 10 10 chr20 54280417 54280516 -12387489 - MIR SINE MIR -64 198 100 183 250 0 19 chr20 54280621 54280673 -12387332 - MIR3 SINE MIR -42 166 116 699 288 111 39 chr20 54281061 54281422 -12386583 + Charlie8 DNA MER1_type 83 469 -1948 470 297 46 6 chr20 54282307 54282482 -12385523 - Charlie8 DNA MER1_type -2207 210 29 864 241 0 0 chr20 54283121 54283295 -12384710 + MER58A DNA MER1_type 46 219 -5 706 239 87 38 chr20 54283385 54283566 -12384439 - MER102b DNA MER1_type -1087 341 142 2333 128 19 25 chr20 54283566 54283932 -12384073 + THE1B LTR MaLR 1 364 0 706 239 87 38 chr20 54283932 54284014 -12383991 - MER102b DNA MER1_type -1286 142 65 705 246 34 29 chr20 54285529 54285736 -12382269 - MER3 DNA MER1_type -1 208 1 1567 214 83 51 chr20 54285935 54286002 -12382003 + L1MD2 LINE L1 5864 5927 -432 1825 173 0 13 chr20 54286002 54286303 -12381702 - AluJo SINE Alu -15 297 1 1567 214 83 51 chr20 54286303 54286506 -12381499 + L1MD2 LINE L1 5927 6122 -237 288 0 0 0 chr20 54286506 54286538 -12381467 + (CA)n Simple_repeat Simple_repeat 2 33 0 1567 214 83 51 chr20 54286538 54286737 -12381268 + L1MD2 LINE L1 6122 6349 -10 520 319 6 0 chr20 54286990 54287172 -12380833 + MIR SINE MIR 68 250 -12 2401 104 0 0 chr20 54287173 54287480 -12380525 + AluSx SINE Alu 1 307 -5 1100 222 33 0 chr20 54287569 54287781 -12380224 - MER58A DNA MER1_type -3 221 3 379 309 30 19 chr20 54288193 54288359 -12379646 - MIR SINE MIR -60 202 36 420 55 0 0 chr20 54288726 54288781 -12379224 + (CA)n Simple_repeat Simple_repeat 2 56 0 304 310 190 19 chr20 54288818 54288976 -12379029 + MIR SINE MIR 28 212 -50 276 91 0 0 chr20 54289022 54289066 -12378939 + (TG)n Simple_repeat Simple_repeat 2 45 0 718 168 117 41 chr20 54289274 54289471 -12378534 - MER20 DNA MER1_type 0 219 8 315 0 0 0 chr20 54290070 54290105 -12377900 + (CA)n Simple_repeat Simple_repeat 2 36 0 184 100 50 0 chr20 54290467 54290507 -12377498 + CT-rich Low_complexity Low_complexity 3 44 0 372 22 0 0 chr20 54290708 54290753 -12377252 + (CA)n Simple_repeat Simple_repeat 2 46 0 851 173 46 18 chr20 54291079 54291285 -12376720 - MER20 DNA MER1_type 0 219 4 536 135 24 95 chr20 54291289 54291415 -12376590 - MER20 DNA MER1_type -98 121 5 444 201 35 21 chr20 54292300 54292596 -12375409 + GA-rich Low_complexity Low_complexity 1 300 0 226 225 0 0 chr20 54292895 54292935 -12375070 + polypyrimidine Low_complexity Low_complexity 6 45 0 2253 95 27 3 chr20 54293159 54293455 -12374550 + AluSg SINE Alu 2 304 -6 1852 154 3 17 chr20 54294439 54294737 -12373268 - AluJo SINE Alu -18 294 1 645 156 0 0 chr20 54295183 54295292 -12372713 + FRAM SINE Alu 53 161 -15 215 209 0 0 chr20 54295318 54295361 -12372644 - MIR SINE MIR -16 246 204 1133 166 27 31 chr20 54295387 54295646 -12372359 - HsTC2 DNA Tc2 -3 1895 1638 531 191 67 0 chr20 54295646 54295751 -12372254 - HsTC2 DNA Tc2 -1784 114 3 321 263 83 26 chr20 54295766 54295922 -12372083 - L2 LINE L2 -33 3280 3116 532 206 0 0 chr20 54296096 54296198 -12371807 - MIR SINE MIR -104 158 57 795 308 82 44 chr20 54296874 54297522 -12370483 - L2 LINE L2 0 3313 2642 2069 126 0 7 chr20 54297710 54298017 -12369988 - AluSx SINE Alu 0 305 1 194 263 222 35 chr20 54298021 54298192 -12369813 + MIR SINE MIR 47 249 -13 332 345 0 42 chr20 54299113 54299182 -12368823 + MIR SINE MIR 21 91 -171 2159 133 32 35 chr20 54299182 54299558 -12368447 - THE1C LTR MaLR 0 375 1 332 345 0 42 chr20 54299558 54299656 -12368349 + MIR SINE MIR 91 181 -81 249 83 0 0 chr20 54300045 54300081 -12367924 + (TG)n Simple_repeat Simple_repeat 1 36 0 225 0 0 0 chr20 54301384 54301409 -12366596 + (A)n Simple_repeat Simple_repeat 1 25 0 205 240 20 0 chr20 54301579 54301629 -12366376 - L2 LINE L2 -49 3223 3173 980 140 33 0 chr20 54301631 54301781 -12366224 - MER20 DNA MER1_type -48 171 17 210 355 73 27 chr20 54301968 54302078 -12365927 - L2 LINE L2 -16 3256 3142 626 0 14 0 chr20 54303255 54303329 -12364676 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 643 290 46 0 chr20 54304231 54304448 -12363557 - MIR SINE MIR -16 246 20 346 123 138 0 chr20 54304494 54304559 -12363446 - MADE1 DNA Mariner 0 80 7 949 189 47 11 chr20 54304695 54304885 -12363120 - MER20 DNA MER1_type -21 198 2 208 240 0 0 chr20 54305349 54305399 -12362606 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 281 233 165 0 chr20 54305400 54305503 -12362502 - L2 LINE L2 0 3272 3153 206 311 40 0 chr20 54306194 54306268 -12361737 + L3 LINE CR1 1498 1574 -3 227 122 20 0 chr20 54306358 54306407 -12361598 + CT-rich Low_complexity Low_complexity 3 52 0 359 300 0 8 chr20 54307679 54307809 -12360196 - MIR SINE MIR -46 216 88 419 207 231 0 chr20 54308144 54308265 -12359740 - MER5A DNA MER1_type -6 183 35 229 192 135 0 chr20 54308461 54308513 -12359492 + Charlie8 DNA MER1_type 1 59 -2358 2223 115 0 10 chr20 54308585 54308897 -12359108 - AluSx SINE Alu -1 311 3 188 255 0 0 chr20 54309199 54309250 -12358755 + L2 LINE L2 3263 3313 0 1745 164 7 17 chr20 54310638 54310930 -12357075 - AluJo SINE Alu -23 289 1 216 0 0 0 chr20 54311389 54311413 -12356592 + (CATTT)n Simple_repeat Simple_repeat 2 25 0 1867 144 3 14 chr20 54311414 54311698 -12356307 - AluSx SINE Alu -31 281 1 542 345 100 20 chr20 54311866 54312623 -12355382 - L2 LINE L2 0 3313 2491 285 29 0 0 chr20 54313459 54313493 -12354512 + (TG)n Simple_repeat Simple_repeat 1 34 0 252 273 0 0 chr20 54313572 54313627 -12354378 - L2 LINE L2 -31 3241 3187 327 212 35 53 chr20 54313739 54313852 -12354153 - MER94 DNA DNA -9 125 15 521 303 67 0 chr20 54314489 54314697 -12353308 + MIR SINE MIR 37 258 -4 255 254 0 0 chr20 54316067 54316122 -12351883 + GA-rich Low_complexity Low_complexity 3 57 0 994 131 21 37 chr20 54322255 54322446 -12345559 - MER53 DNA DNA -1 188 1 434 196 9 0 chr20 54322546 54322653 -12345352 + CT-rich Low_complexity Low_complexity 1 108 0 197 329 12 37 chr20 54322663 54322745 -12345260 - L2 LINE L2 -1 3312 3233 291 317 35 21 chr20 54322776 54322921 -12345084 - MIR SINE MIR -34 228 82 209 271 71 0 chr20 54323209 54323279 -12344726 + MIR SINE MIR 116 190 -72 291 263 61 11 chr20 54323545 54323677 -12344328 - MIR SINE MIR -62 146 15 325 222 111 50 chr20 54326474 54326573 -12341432 + MER81 DNA DNA 9 113 -1 319 125 0 0 chr20 54326584 54326632 -12341373 + U5 snRNA snRNA 1 48 -68 325 238 75 0 chr20 54326750 54326830 -12341175 - MIR SINE MIR -69 193 108 259 190 0 17 chr20 54327709 54327767 -12340238 - MIR SINE MIR -73 135 79 228 135 0 0 chr20 54328435 54328472 -12339533 + (TCCC)n Simple_repeat Simple_repeat 4 40 0 212 305 49 12 chr20 54328489 54328571 -12339434 - L2 LINE L2 -36 3277 3193 228 339 38 65 chr20 54329190 54329331 -12338674 - L2 LINE L2 0 3272 3129 2339 99 3 3 chr20 54329331 54329635 -12338370 - AluSx SINE Alu -8 304 1 228 339 38 65 chr20 54329635 54329942 -12338063 - L2 LINE L2 -143 3129 2836 198 333 114 0 chr20 54330006 54330129 -12337876 - MIR SINE MIR -78 184 48 623 307 52 13 chr20 54330323 54330554 -12337451 - MIR SINE MIR -7 255 16 448 270 61 20 chr20 54331412 54331608 -12336397 + MIR SINE MIR 27 230 -32 281 68 23 0 chr20 54332102 54332146 -12335859 + (ATG)n Simple_repeat Simple_repeat 3 47 0 180 0 0 0 chr20 54332144 54332164 -12335841 + (GGA)n Simple_repeat Simple_repeat 2 21 0 * 203 217 83 0 chr20 54332171 54332231 -12335774 + MIR SINE MIR 166 230 -32 963 35 6 0 chr20 54332236 54332368 -12335637 + L1HS LINE L1 6019 6155 0 23 0 0 0 chr20 54332491 54332514 -12335491 + AT_rich Low_complexity Low_complexity 1 23 0 250 329 88 12 chr20 54332731 54332901 -12335104 + LTR16C LTR ERVL 86 268 -223 460 270 26 20 chr20 54332913 54333065 -12334940 - MIR SINE MIR -51 211 59 228 364 46 38 chr20 54333747 54333986 -12334019 + MIR SINE MIR 8 248 -14 229 340 8 40 chr20 54334166 54334416 -12333589 - L2 LINE L2 -252 3061 2820 2245 115 3 0 chr20 54334572 54334867 -12333138 - AluSg SINE Alu -14 296 1 216 259 17 0 chr20 54335343 54335401 -12332604 - L2 LINE L2 -32 3281 3223 191 324 127 0 chr20 54335601 54335743 -12332262 - L2 LINE L2 -384 2930 2771 457 317 31 13 chr20 54335807 54335853 -12332152 - L2 LINE L2 -557 2757 2713 2137 119 17 0 chr20 54335853 54336146 -12331859 - AluSq SINE Alu -15 298 1 457 317 31 13 chr20 54336146 54336326 -12331679 - L2 LINE L2 -601 2713 2527 2125 96 33 0 chr20 54336556 54336850 -12331155 + AluSc SINE Alu 1 303 0 204 250 0 33 chr20 54337336 54337396 -12330609 + (TCTCTG)n Simple_repeat Simple_repeat 2 59 0 2285 109 3 0 chr20 54338205 54338507 -12329498 + AluSp SINE Alu 3 305 -8 412 283 157 26 chr20 54338533 54338763 -12329242 - MLT1K LTR MaLR 0 588 329 455 261 92 41 chr20 54339025 54339188 -12328817 + MIR SINE MIR 38 214 -48 905 207 16 11 chr20 54339188 54339376 -12328629 - MER5A DNA MER1_type 0 189 1 455 261 92 41 chr20 54339376 54339407 -12328598 + MIR SINE MIR 214 242 -20 351 186 0 0 chr20 54339920 54339990 -12328015 + MER41B LTR ERV1 481 550 -85 200 217 0 0 chr20 54339990 54340036 -12327969 + A-rich Low_complexity Low_complexity 1 46 0 521 315 101 35 chr20 54340048 54340423 -12327582 - MLT1K LTR MaLR -97 491 92 192 338 14 0 chr20 54340691 54340762 -12327243 + L2 LINE L2 2997 3068 -245 1605 234 15 9 chr20 54341305 54341387 -12326618 - MER58B DNA MER1_type -2080 340 260 2731 133 18 23 chr20 54341387 54341823 -12326182 - Tigger2a DNA MER2_type 0 434 1 1605 234 15 9 chr20 54341823 54342078 -12325927 - MER58B DNA MER1_type -2160 260 1 796 270 158 6 chr20 54342190 54342697 -12325308 - L2 LINE L2 -46 3267 2662 233 29 29 0 chr20 54343194 54343228 -12324777 + (TTTG)n Simple_repeat Simple_repeat 3 37 0 2121 114 10 0 chr20 54343251 54343548 -12324457 - AluY SINE Alu -11 300 1 662 320 99 13 chr20 54343550 54343922 -12324083 - L2 LINE L2 -10 3303 2900 1167 231 0 5 chr20 54343934 54344155 -12323850 - MER58A DNA MER1_type 0 224 5 547 199 148 97 chr20 54344173 54344546 -12323459 - LTR16A1 LTR ERVL 0 457 86 341 291 82 8 chr20 54344957 54345091 -12322914 - MIR SINE MIR -6 256 113 191 348 45 11 chr20 54345164 54345253 -12322752 - MIR SINE MIR -147 115 24 289 227 15 0 chr20 54345546 54345612 -12322393 - L2 LINE L2 -5 3308 3242 416 297 40 18 chr20 54345645 54345819 -12322186 - MIR SINE MIR -51 211 36 587 322 9 5 chr20 54345871 54346085 -12321920 - MIR SINE MIR -8 254 40 470 335 31 18 chr20 54346158 54346382 -12321623 - MIR SINE MIR 0 262 36 284 102 20 0 chr20 54347303 54347352 -12320653 + (GA)n Simple_repeat Simple_repeat 2 51 0 2133 122 3 31 chr20 54347986 54348307 -12319698 + AluSx SINE Alu 1 312 0 319 277 129 0 chr20 54348413 54348514 -12319491 - L2 LINE L2 0 3313 3200 1445 171 64 50 chr20 54349163 54349443 -12318562 + AluJo SINE Alu 4 287 -25 360 0 0 0 chr20 54349444 54349484 -12318521 + (CA)n Simple_repeat Simple_repeat 2 41 0 231 324 0 0 chr20 54349840 54349911 -12318094 + L2 LINE L2 3119 3189 -83 22 35 0 0 chr20 54350444 54350473 -12317532 + AT_rich Low_complexity Low_complexity 1 29 0 2251 100 0 32 chr20 54350676 54350985 -12317020 + AluSx SINE Alu 1 299 -13 637 248 69 0 chr20 54351133 54351335 -12316670 - L2 LINE L2 0 3313 3098 27 49 0 0 chr20 54351342 54351383 -12316622 + AT_rich Low_complexity Low_complexity 1 41 0 5657 113 5 0 chr20 54351383 54352200 -12315805 - L1PB2 LINE L1 -4 6147 5327 337 290 10 10 chr20 54352207 54352307 -12315698 - L2 LINE L2 -240 3073 2974 711 259 38 84 chr20 54352582 54352845 -12315160 + MER102b DNA MER1_type 87 337 -4 1103 191 10 5 chr20 54353393 54353587 -12314418 + MER58A DNA MER1_type 30 224 0 2192 123 0 3 chr20 54353747 54354049 -12313956 + AluSx SINE Alu 1 301 -11 385 324 52 7 chr20 54354071 54354207 -12313798 - LTR67 LTR ERVL -4 553 412 1447 125 9 19 chr20 54355005 54355221 -12312784 - AluJo SINE Alu -12 300 87 259 242 13 4 chr20 54355386 54355464 -12312541 - MIR SINE MIR -92 116 50 2036 134 0 13 chr20 54355738 54356037 -12311968 + AluSx SINE Alu 1 295 -17 479 130 8 199 chr20 54356222 54356293 -12311712 + MER63 DNA MER1_type 1 84 -978 2216 114 0 7 chr20 54356293 54356600 -12311405 + AluSc SINE Alu 1 305 -4 479 130 8 199 chr20 54356600 54356659 -12311346 + MER63 DNA MER1_type 84 732 -330 247 255 39 39 chr20 54356766 54356868 -12311137 + MIR SINE MIR 155 256 -6 533 288 30 20 chr20 54357773 54357971 -12310034 + MIR SINE MIR 2 201 -61 857 248 116 56 chr20 54358061 54358544 -12309461 + MER113 DNA MER1_type? 1 512 -9 180 0 0 0 chr20 54358593 54358613 -12309392 + (A)n Simple_repeat Simple_repeat 1 20 0 1401 163 52 68 chr20 54359806 54360113 -12307892 - AluJb SINE Alu -10 302 1 683 250 88 13 chr20 54360183 54360411 -12307594 + MIR SINE MIR 17 261 -1 518 304 66 57 chr20 54360707 54361161 -12306844 - L2 LINE L2 0 3313 2856 22 0 0 0 chr20 54361952 54361974 -12306031 + AT_rich Low_complexity Low_complexity 1 22 0 24 67 0 0 chr20 54362449 54362494 -12305511 + AT_rich Low_complexity Low_complexity 1 45 0 1942 131 29 35 chr20 54363501 54363815 -12304190 - AluSx SINE Alu 0 312 1 369 293 42 45 chr20 54363856 54364021 -12303984 + MIR3 SINE MIR 2 163 -62 504 296 111 5 chr20 54366214 54366430 -12301575 + MIR SINE MIR 14 252 -10 198 0 0 0 chr20 54366592 54366614 -12301391 + (TTA)n Simple_repeat Simple_repeat 3 24 0 1680 40 0 0 chr20 54366614 54366812 -12301193 - L1PA3 LINE L1 -18 6137 5940 2226 101 0 0 chr20 54367173 54367487 -12300518 - AluSc SINE Alu 0 314 1 2502 60 0 10 chr20 54367496 54367795 -12300210 - AluY SINE Alu -15 296 1 180 111 0 0 chr20 54367950 54367977 -12300028 + (T)n Simple_repeat Simple_repeat 1 27 0 2207 109 10 0 chr20 54368255 54368549 -12299456 + AluSg SINE Alu 1 297 -13 227 254 17 0 chr20 54368859 54368918 -12299087 - MLT1J LTR MaLR -342 169 110 238 191 0 0 chr20 54369324 54369371 -12298634 - L2 LINE L2 -3 3310 3264 301 279 72 9 chr20 54369429 54369540 -12298465 - MIR SINE MIR 0 262 145 398 231 22 11 chr20 54369550 54369641 -12298364 + MER81 DNA DNA 1 92 -22 316 221 124 18 chr20 54370066 54370179 -12297826 - MER5B DNA MER1_type -3 175 51 402 252 50 11 chr20 54370179 54370336 -12297669 - L1ME3 LINE L1 0 6170 6011 180 403 0 0 chr20 54370585 54370652 -12297353 + L2 LINE L2 3123 3189 -83 261 204 21 21 chr20 54371964 54372057 -12295948 + A-rich Low_complexity Low_complexity 2 94 0 355 303 32 7 chr20 54372449 54372604 -12295401 - MER103 DNA DNA -5 161 3 192 304 116 18 chr20 54372711 54372823 -12295182 - MIR3 SINE MIR -37 171 49 * 207 191 191 16 chr20 54372815 54372878 -12295127 + MIR3 SINE MIR 87 160 -48 2463 245 29 17 chr20 54372943 54373527 -12294478 - MLT1E LTR MaLR 0 593 3 1912 155 3 23 chr20 54374357 54374666 -12293339 + AluJo SINE Alu 1 303 -9 205 319 43 37 chr20 54376215 54376378 -12291627 + MIR3 SINE MIR 41 204 -4 2023 131 0 0 chr20 54376596 54376871 -12291134 + AluSx SINE Alu 34 308 -4 531 267 148 55 chr20 54376880 54377180 -12290825 - MLT1H1 LTR MaLR -1 554 225 2206 117 7 0 chr20 54377180 54377479 -12290526 - AluSx SINE Alu -11 301 1 531 267 148 55 chr20 54377479 54377711 -12290294 - MLT1H1 LTR MaLR -330 225 16 366 302 28 117 chr20 54378239 54378597 -12289408 - L2 LINE L2 -50 3222 2897 218 303 0 30 chr20 54378821 54378887 -12289118 - L2 LINE L2 -19 3253 3190 535 234 0 0 chr20 54379286 54379393 -12288612 + MER58B DNA MER1_type 235 341 0 191 315 0 0 chr20 54380568 54380622 -12287383 + L2 LINE L2 3217 3270 -2 183 356 45 15 chr20 54380668 54380800 -12287205 - L2 LINE L2 -184 3088 2953 2512 124 6 3 chr20 54381352 54381715 -12286290 - THE1B LTR MaLR 0 364 1 310 276 122 16 chr20 54381730 54381853 -12286152 - L2 LINE L2 -5 3308 3173 * 427 214 83 21 chr20 54381844 54381989 -12286016 - MIR SINE MIR -9 253 100 243 257 68 0 chr20 54382088 54382162 -12285843 - L2 LINE L2 -249 3064 2986 358 194 51 51 chr20 54382218 54382316 -12285689 + MIR SINE MIR 52 149 -113 286 290 0 0 chr20 54382624 54382693 -12285312 + (CAT)n Simple_repeat Simple_repeat 1 69 0 713 262 63 5 chr20 54382708 54382929 -12285076 - MIR SINE MIR -21 241 8 844 252 86 28 chr20 54382931 54383292 -12284713 + MER113 DNA MER1_type? 32 413 -108 2423 93 0 0 chr20 54383962 54384262 -12283743 + AluSg SINE Alu 2 301 -9 521 266 53 5 chr20 54384273 54384461 -12283544 - MER102b DNA MER1_type -30 311 115 298 217 139 35 chr20 54384583 54384698 -12283307 + MIR SINE MIR 21 147 -115 2076 129 0 0 chr20 54384807 54385093 -12282912 + AluSx SINE Alu 20 305 -7 423 279 18 9 chr20 54385539 54385650 -12282355 + MER81 DNA DNA 2 113 -1 180 0 0 0 chr20 54385968 54385988 -12282017 + (TGAA)n Simple_repeat Simple_repeat 4 23 0 2274 109 0 6 chr20 54386121 54386433 -12281572 - AluSx SINE Alu 0 312 3 1497 194 8 0 chr20 54386915 54387203 -12280802 - AluJb SINE Alu 0 320 31 200 293 49 0 chr20 54387207 54387289 -12280716 + L2 LINE L2 2993 3078 -194 266 0 29 0 chr20 54388219 54388253 -12279752 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2202 102 0 7 chr20 54388332 54388635 -12279370 - AluSg SINE Alu -5 305 5 1206 77 19 0 chr20 54389905 54390061 -12277944 + AluY SINE Alu 141 299 -12 409 248 263 12 chr20 54390174 54390513 -12277492 - L2 LINE L2 0 3313 2890 210 118 0 0 chr20 54392368 54392402 -12275603 + (GA)n Simple_repeat Simple_repeat 2 35 0 1162 174 56 19 chr20 54392480 54392693 -12275312 + MER58A DNA MER1_type 4 224 0 418 263 83 0 chr20 54392743 54392876 -12275129 - L1MD2 LINE L1 -1 6358 6215 262 279 71 33 chr20 54394244 54394427 -12273578 - LTR33 LTR ERVL 0 521 332 205 345 23 0 chr20 54394862 54394949 -12273056 - L2 LINE L2 -273 2999 2911 242 336 29 10 chr20 54395301 54395405 -12272600 + L3 LINE CR1 1196 1301 -276 216 339 26 26 chr20 54395635 54395750 -12272255 + L2 LINE L2 3199 3313 0 2575 57 0 3 chr20 54396013 54396313 -12271692 - AluY SINE Alu -12 299 1 910 231 65 103 chr20 54396668 54397235 -12270770 - L2 LINE L2 -66 3247 2660 2235 76 36 33 chr20 54397235 54397539 -12270466 - AluSg SINE Alu -5 305 1 910 231 65 103 chr20 54397539 54397662 -12270343 - L2 LINE L2 -653 2660 2588 775 221 26 32 chr20 54397662 54397852 -12270153 + MER5A DNA MER1_type 1 189 0 910 231 65 103 chr20 54397852 54397918 -12270087 - L2 LINE L2 -725 2588 2521 290 204 133 0 chr20 54397952 54398050 -12269955 + MER102a DNA MER1_type 220 330 0 365 270 7 66 chr20 54398946 54399098 -12268907 - MER104 DNA Tc2 -2 178 36 243 276 86 38 chr20 54399086 54399191 -12268814 - MLT1L LTR MaLR -86 529 420 * 223 224 26 0 chr20 54399340 54399416 -12268589 + (TA)n Simple_repeat Simple_repeat 1 78 0 354 315 21 0 chr20 54399443 54399586 -12268419 + (TA)n Simple_repeat Simple_repeat 1 146 0 1118 229 33 17 chr20 54399628 54399929 -12268076 - MLT2C1 LTR ERVL -91 306 1 249 233 67 0 chr20 54400002 54400062 -12267943 - MLT1J LTR MaLR -334 177 114 316 303 61 12 chr20 54400286 54400451 -12267554 - MER113 DNA MER1_type? -321 200 28 183 341 83 8 chr20 54400505 54400637 -12267368 + MIR SINE MIR 15 156 -106 228 306 12 0 chr20 54400973 54401058 -12266947 - MIR SINE MIR -106 156 71 728 238 22 32 chr20 54401082 54401267 -12266738 + MER20 DNA MER1_type 19 201 -18 690 217 138 0 chr20 54402088 54402240 -12265765 - MER45A DNA AcHobo -5 173 1 2537 67 3 10 chr20 54402728 54403041 -12264964 - AluY SINE Alu 0 311 1 270 261 22 80 chr20 54403582 54403720 -12264285 + L2 LINE L2 3184 3313 0 495 252 27 9 chr20 54403894 54404005 -12264000 + MER81 DNA DNA 1 113 -1 818 154 0 22 chr20 54404046 54404182 -12263823 - FLAM_C SINE Alu 0 133 1 2063 121 7 0 chr20 54404288 54404568 -12263437 - AluSx SINE Alu -30 282 1 1732 201 3 27 chr20 54404568 54404937 -12263068 - L1MC3 LINE L1 -25 7760 7401 320 265 89 28 chr20 54405152 54405312 -12262693 - MIR SINE MIR -63 145 19 249 257 277 0 chr20 54405393 54405494 -12262511 - MER5A DNA MER1_type 0 189 61 2471 97 0 0 chr20 54405513 54405824 -12262181 - AluSx SINE Alu -1 311 1 249 83 0 0 chr20 54406769 54406805 -12261200 + (CAT)n Simple_repeat Simple_repeat 3 38 0 289 299 109 0 chr20 54406811 54406958 -12261047 - MIR SINE MIR -15 247 85 189 277 0 0 chr20 54407412 54407459 -12260546 - L2 LINE L2 0 3272 3226 287 182 23 68 chr20 54407626 54407714 -12260291 - L2 LINE L2 -189 3083 3000 975 220 5 22 chr20 54409700 54409923 -12258082 - MER20 DNA MER1_type 0 219 1 1067 138 0 0 chr20 54410192 54410352 -12257653 - L1PA11 LINE L1 0 6174 6015 1258 168 39 45 chr20 54410359 54410645 -12257360 - L1MB7 LINE L1 -15 6169 5886 * 1349 176 84 4 chr20 54410639 54410901 -12257104 + L1MB7 LINE L1 5578 5860 -314 336 291 12 0 chr20 54410902 54410988 -12257017 + L2 LINE L2 3226 3312 -1 183 80 0 0 chr20 54411080 54411105 -12256900 + (GAAAA)n Simple_repeat Simple_repeat 5 29 0 459 304 48 44 chr20 54411352 54411625 -12256380 + MARNA DNA Mariner 76 349 -237 551 230 152 26 chr20 54411672 54411863 -12256142 + MIR SINE MIR 22 236 -26 1959 169 0 0 chr20 54411927 54412228 -12255777 + AluJb SINE Alu 1 301 -11 22 0 0 0 chr20 54412269 54412291 -12255714 + AT_rich Low_complexity Low_complexity 1 22 0 2062 209 87 9 chr20 54412344 54412804 -12255201 - MLT1D LTR MaLR -9 496 1 592 205 113 97 chr20 54414130 54414172 -12253833 + MLT1E3 LTR MaLR 1 41 -585 385 245 68 20 chr20 54414172 54414319 -12253686 + MLT2C1 LTR ERVL 44 197 -200 592 205 113 97 chr20 54414319 54414401 -12253604 + MLT1E3 LTR MaLR 41 242 -384 203 333 93 16 chr20 54414408 54414591 -12253414 + MIR SINE MIR 66 262 0 243 0 0 0 chr20 54414790 54414817 -12253188 + (T)n Simple_repeat Simple_repeat 1 27 0 2045 135 20 0 chr20 54415057 54415360 -12252645 + AluSx SINE Alu 3 311 -1 605 232 112 54 chr20 54415899 54416291 -12251714 - L1ME4a LINE L1 -115 6006 5592 576 230 9 0 chr20 54416441 54416554 -12251451 + MER81 DNA DNA 1 114 0 211 154 26 0 chr20 54417591 54417630 -12250375 + (TTTA)n Simple_repeat Simple_repeat 3 42 0 2078 205 29 8 chr20 54417855 54418338 -12249667 + L1MB7 LINE L1 5683 6175 -9 383 345 43 26 chr20 54418375 54418628 -12249377 - L2 LINE L2 -221 3051 2796 340 275 174 13 chr20 54418766 54418915 -12249090 - MIR SINE MIR -77 185 13 944 230 0 6 chr20 54418932 54419110 -12248895 + MER45A DNA AcHobo 2 178 0 207 0 0 0 chr20 54419425 54419448 -12248557 + (TAA)n Simple_repeat Simple_repeat 2 24 0 198 143 0 0 chr20 54419502 54419537 -12248468 + (TG)n Simple_repeat Simple_repeat 1 35 0 875 129 0 50 chr20 54419940 54420080 -12247925 + FLAM_C SINE Alu 1 133 0 2130 124 0 13 chr20 54420887 54421202 -12246803 - AluSx SINE Alu -1 311 1 524 210 26 8 chr20 54421802 54421936 -12246069 + MIR SINE MIR 19 154 -59 317 214 14 0 chr20 54421936 54422006 -12245999 + MER46C DNA MER2_type 1 71 -267 579 130 0 0 chr20 54422016 54422108 -12245897 - MER53 DNA DNA -95 94 3 315 226 24 24 chr20 54422111 54422195 -12245810 + MER46C DNA MER2_type 69 152 -186 428 294 41 18 chr20 54422199 54422369 -12245636 - L2 LINE L2 -350 2964 2791 220 263 0 18 chr20 54422391 54422448 -12245557 - MIR SINE MIR -166 96 41 200 352 28 0 chr20 54422972 54423043 -12244962 - L2 LINE L2 -10 3303 3231 735 229 88 9 chr20 54423156 54423383 -12244622 - MIR SINE MIR 0 262 18 952 236 49 29 chr20 54424157 54424403 -12243602 + MER20B DNA MER1_type 1 251 -532 957 141 0 0 chr20 54424433 54424616 -12243389 - AluSx SINE Alu 0 312 162 712 84 0 28 chr20 54424616 54424723 -12243282 - AluSx SINE Alu -208 105 2 2455 82 0 0 chr20 54424735 54425041 -12242964 - AluY SINE Alu -5 306 1 1226 241 40 3 chr20 54425043 54425366 -12242639 + MER20B DNA MER1_type 296 630 -153 884 293 74 24 chr20 54425506 54425885 -12242120 + LTR16C LTR ERVL 90 487 -4 225 286 0 0 chr20 54425888 54425951 -12242054 + MER20B DNA MER1_type 721 783 0 887 199 7 0 chr20 54426225 54426371 -12241634 + AluJb SINE Alu 138 284 -28 259 303 151 34 chr20 54426434 54426672 -12241333 - L2 LINE L2 0 3313 3048 206 336 95 7 chr20 54429057 54429194 -12238811 + MIR SINE MIR 44 192 -70 246 341 130 18 chr20 54429374 54429597 -12238408 - MIR SINE MIR 0 262 15 2171 121 0 25 chr20 54429671 54429985 -12238020 + AluSx SINE Alu 1 306 -6 2427 66 20 3 chr20 54430127 54430428 -12237577 - AluY SINE Alu -5 306 1 1783 136 21 24 chr20 54430851 54431168 -12236837 - AluSx SINE Alu 0 316 1 577 251 154 70 chr20 54431344 54431537 -12236468 - L2 LINE L2 -10 3303 3128 2012 151 0 10 chr20 54431537 54431841 -12236164 + AluJb SINE Alu 1 301 -11 577 251 154 70 chr20 54431841 54431982 -12236023 - L2 LINE L2 -185 3128 3000 2145 120 0 13 chr20 54431982 54432283 -12235722 + AluSx SINE Alu 1 297 -15 577 251 154 70 chr20 54432283 54432433 -12235572 - L2 LINE L2 -313 3000 2763 253 266 18 62 chr20 54432631 54432744 -12235261 + MIR SINE MIR 35 142 -66 412 235 78 72 chr20 54432912 54433036 -12234969 - Charlie8 DNA MER1_type -147 194 67 1944 153 0 10 chr20 54433036 54433337 -12234668 + AluJo SINE Alu 1 298 -14 412 235 78 72 chr20 54433337 54433378 -12234627 - Charlie8 DNA MER1_type -274 67 28 1279 231 142 12 chr20 54433396 54433798 -12234207 - MLT1C LTR MaLR -8 459 6 916 197 171 80 chr20 54434030 54434161 -12233844 - MLT1C LTR MaLR 0 467 349 2168 122 3 0 chr20 54434161 54434457 -12233548 + AluSx SINE Alu 11 307 -5 916 197 171 80 chr20 54434457 54434700 -12233305 - MLT1C LTR MaLR -118 349 59 1956 161 3 3 chr20 54434752 54435056 -12232949 + AluSx SINE Alu 1 304 -8 320 62 0 21 chr20 54435056 54435104 -12232901 + (GGAA)n Simple_repeat Simple_repeat 1 47 0 549 284 55 6 chr20 54436093 54436276 -12231729 - L2 LINE L2 -664 2650 2459 5455 133 47 9 chr20 54436540 54437207 -12230798 - L1PA15 LINE L1 -5 6160 5425 180 0 0 0 chr20 54437207 54437227 -12230778 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 5455 133 47 9 chr20 54437227 54437479 -12230526 - L1PA15 LINE L1 -740 5425 5184 236 250 0 0 chr20 54437601 54437649 -12230356 + (CA)n Simple_repeat Simple_repeat 2 49 0 321 211 11 22 chr20 54437726 54437816 -12230189 - MER113 DNA MER1_type? -430 91 3 317 338 136 0 chr20 54438609 54438763 -12229242 - L2 LINE L2 -210 3062 2888 597 223 9 0 chr20 54438780 54438892 -12229113 + MER81 DNA DNA 1 113 -1 332 174 238 52 chr20 54439029 54439181 -12228824 - MLT1H1 LTR MaLR -10 644 349 853 240 88 20 chr20 54439307 54439557 -12228448 - MLT1H1 LTR MaLR -277 278 12 372 270 0 0 chr20 54440011 54440100 -12227905 - MER58B DNA MER1_type 0 341 253 1840 165 0 10 chr20 54440135 54440432 -12227573 + AluJb SINE Alu 1 294 -18 2060 127 3 0 chr20 54440616 54440939 -12227066 + AluSx SINE Alu 1 324 0 194 255 0 0 chr20 54441610 54441657 -12226348 + L2 LINE L2 3204 3250 -22 1970 144 0 0 chr20 54441657 54441965 -12226040 + AluJb SINE Alu 1 308 0 225 0 0 0 chr20 54442697 54442722 -12225283 + (TG)n Simple_repeat Simple_repeat 1 25 0 276 233 8 75 chr20 54442958 54443078 -12224927 - MER113 DNA MER1_type? -409 112 1 238 368 83 0 chr20 54443566 54443759 -12224246 + MIR SINE MIR 51 259 -3 333 254 77 21 chr20 54445371 54445514 -12222491 + MIR SINE MIR 30 181 -63 2204 106 6 10 chr20 54445538 54445850 -12222155 + AluSq SINE Alu 3 313 0 2019 129 3 3 chr20 54446035 54446346 -12221659 + AluSx SINE Alu 1 311 0 258 287 32 0 chr20 54447096 54447190 -12220815 + MIR SINE MIR 48 144 -64 2468 61 6 13 chr20 54447398 54447711 -12220294 + AluY SINE Alu 1 311 0 222 318 16 24 chr20 54448353 54448479 -12219526 - L2 LINE L2 -339 2933 2809 2166 120 3 10 chr20 54450325 54450624 -12217381 + AluSx SINE Alu 4 300 -12 185 290 72 14 chr20 54450907 54450976 -12217029 - L2 LINE L2 -46 3226 3154 2089 100 57 20 chr20 54451139 54451440 -12216565 - AluSx SINE Alu 0 312 1 1279 155 19 5 chr20 54452252 54452465 -12215540 + MER20 DNA MER1_type 3 218 -1 2531 41 0 16 chr20 54453125 54453439 -12214566 - L1P3 LINE L1 -423 5731 5423 973 229 33 5 chr20 54453439 54453653 -12214352 - MER58A DNA MER1_type -4 220 1 2317 75 4 0 chr20 54453673 54454002 -12214003 - AluY SINE Alu 0 330 1 197 33 33 0 chr20 54454004 54454034 -12213971 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 548 192 125 17 chr20 54454034 54454154 -12213851 - FLAM_C SINE Alu 0 133 1 2052 144 7 0 chr20 54454218 54454523 -12213482 + AluSx SINE Alu 1 307 -5 370 298 89 52 chr20 54454525 54454730 -12213275 + L1ME4a LINE L1 5625 5852 -269 2096 114 41 3 chr20 54454730 54455020 -12212985 + AluSx SINE Alu 1 301 -11 370 298 89 52 chr20 54455020 54455183 -12212822 + L1ME4a LINE L1 5852 6007 -114 1807 128 15 66 chr20 54455250 54455392 -12212613 - L1PA15 LINE L1 0 6165 6017 1884 144 24 0 chr20 54455392 54455684 -12212321 - AluSx SINE Alu -13 299 1 1807 128 15 66 chr20 54455684 54455876 -12212129 - L1PA15 LINE L1 -148 6017 5848 330 333 44 6 chr20 54455951 54456110 -12211895 + MIR SINE MIR 85 249 -13 701 212 153 31 chr20 54456149 54456212 -12211793 + L1MD2 LINE L1 6070 6124 -235 279 54 0 0 chr20 54456212 54456249 -12211756 + (CA)n Simple_repeat Simple_repeat 2 38 0 701 212 153 31 chr20 54456249 54456440 -12211565 + L1MD2 LINE L1 6124 6355 -4 320 330 20 0 chr20 54457021 54457121 -12210884 - L2 LINE L2 -2 3270 3169 243 0 0 0 chr20 54457416 54457443 -12210562 + (A)n Simple_repeat Simple_repeat 1 27 0 2229 78 0 7 chr20 54458485 54458793 -12209212 - AluY SINE Alu 0 306 1 589 265 35 12 chr20 54458857 54459027 -12208978 - MIR SINE MIR -31 231 58 1851 145 14 17 chr20 54459131 54459420 -12208585 + AluJb SINE Alu 11 298 -14 7534 41 0 7 chr20 54459476 54460701 -12207304 + L1PA5 LINE L1 4936 6154 0 188 325 104 0 chr20 54460740 54460817 -12207188 - MIR SINE MIR -91 117 33 424 258 62 71 chr20 54460956 54461025 -12206980 + MIR SINE MIR 15 83 -179 1868 163 3 10 chr20 54461025 54461325 -12206680 + AluJo SINE Alu 1 298 -14 424 258 62 71 chr20 54461325 54461495 -12206510 + MIR SINE MIR 83 252 -10 479 285 66 31 chr20 54462977 54463205 -12204800 - MIR SINE MIR -25 237 2 252 257 0 0 chr20 54463562 54463632 -12204373 - MIR SINE MIR -113 149 80 276 225 42 67 chr20 54463691 54463811 -12204194 - L2 LINE L2 -35 3278 3162 1673 176 3 99 chr20 54463820 54463955 -12204050 + MER7A DNA MER2_type 1 147 -2891 4303 79 39 22 chr20 54463955 54464327 -12203678 - L1PB1 LINE L1 -1 6150 5763 2502 80 0 3 chr20 54464327 54464639 -12203366 - AluY SINE Alu 0 311 1 4303 79 39 22 chr20 54464639 54464888 -12203117 - L1PB1 LINE L1 -388 5763 5519 1673 176 3 99 chr20 54464888 54465126 -12202879 + MER7A DNA MER2_type 147 336 -10 270 318 133 19 chr20 54465132 54465396 -12202609 - L2 LINE L2 -184 3129 2836 1718 165 132 0 chr20 54465500 54465827 -12202178 - L1PA16 LINE L1 -9 6157 5788 1977 149 7 0 chr20 54467525 54467820 -12200185 + AluSx SINE Alu 1 297 -15 541 315 88 36 chr20 54468042 54468270 -12199735 - L2 LINE L2 0 3313 3098 1872 149 3 40 chr20 54468270 54468592 -12199413 + AluJo SINE Alu 1 310 -2 541 315 88 36 chr20 54468592 54469032 -12198973 - L2 LINE L2 -215 3098 2602 364 307 159 36 chr20 54469167 54469444 -12198561 - L2 LINE L2 -3 3310 3000 1105 189 70 9 chr20 54470355 54470582 -12197423 - MER58 DNA MER1_type -100 241 1 204 300 89 11 chr20 54470778 54470868 -12197137 + L2 LINE L2 3151 3247 -25 2466 97 0 0 chr20 54472391 54472701 -12195304 - AluSx SINE Alu 0 312 3 360 0 0 0 chr20 54473144 54473184 -12194821 + (TTA)n Simple_repeat Simple_repeat 1 40 0 2045 136 3 0 chr20 54473236 54473531 -12194474 - AluSx SINE Alu -16 296 1 531 248 94 60 chr20 54473963 54474103 -12193902 + MIR SINE MIR 11 164 -98 1546 212 0 0 chr20 54474103 54474410 -12193595 + AluJo SINE Alu 1 307 -5 531 248 94 60 chr20 54474410 54474503 -12193502 + MIR SINE MIR 164 252 -10 180 0 0 0 chr20 54474559 54474579 -12193426 + (TTTC)n Simple_repeat Simple_repeat 1 20 0 726 143 0 0 chr20 54474955 54475081 -12192924 - L1MB3 LINE L1 0 6183 6058 635 248 171 69 chr20 54475551 54475942 -12192063 - LTR16C LTR ERVL 0 491 61 338 121 61 0 chr20 54475942 54476008 -12191997 + AluJ/FLAM SINE Alu 1 70 -232 779 270 26 0 chr20 54476010 54476199 -12191806 + MIR SINE MIR 48 241 -21 23 24 0 24 chr20 54476416 54476436 -12191569 + AT_rich Low_complexity Low_complexity 1 20 -20 1581 139 77 11 chr20 54476436 54476709 -12191296 + AluJb SINE Alu 21 311 -1 23 24 0 24 chr20 54476709 54476729 -12191276 + AT_rich Low_complexity Low_complexity 20 40 0 1480 126 0 5 chr20 54476905 54477120 -12190885 + AluJo SINE Alu 12 225 -87 407 171 0 26 chr20 54477148 54477224 -12190781 + AluJo SINE Alu 217 290 -22 490 273 136 5 chr20 54477384 54477582 -12190423 + MIR SINE MIR 39 262 0 277 196 18 0 chr20 54480185 54480241 -12187764 + MER20 DNA MER1_type 148 204 -15 672 82 153 0 chr20 54480323 54480421 -12187584 + THE1B LTR MaLR 1 113 -251 352 318 133 19 chr20 54480422 54480686 -12187319 - L2 LINE L2 -184 3129 2836 1695 165 131 3 chr20 54480790 54481118 -12186887 - L1PA16 LINE L1 -9 6157 5788 1853 152 7 0 chr20 54482816 54483112 -12184893 + AluSx SINE Alu 1 298 -14 687 317 88 36 chr20 54483334 54483562 -12184443 - L2 LINE L2 0 3313 3098 1759 152 3 34 chr20 54483562 54483884 -12184121 + AluJo SINE Alu 1 312 0 687 317 88 36 chr20 54483884 54484324 -12183681 - L2 LINE L2 -215 3098 2602 466 307 159 36 chr20 54484459 54484736 -12183269 - L2 LINE L2 -3 3310 3000 1101 189 75 13 chr20 54485647 54485874 -12182131 - MER58 DNA MER1_type -2179 241 1 234 300 89 11 chr20 54486070 54486160 -12181845 + L2 LINE L2 3151 3247 -25 2314 100 0 0 chr20 54487680 54487990 -12180015 - AluSx SINE Alu 0 312 3 360 0 0 0 chr20 54488433 54488473 -12179532 + (TTA)n Simple_repeat Simple_repeat 1 40 0 1921 136 3 0 chr20 54488525 54488820 -12179185 - AluSx SINE Alu -16 296 1 531 248 94 60 chr20 54489252 54489392 -12178613 + MIR SINE MIR 11 164 -98 1546 212 0 0 chr20 54489392 54489699 -12178306 + AluJo SINE Alu 1 307 -5 531 248 94 60 chr20 54489699 54489792 -12178213 + MIR SINE MIR 164 252 -10 180 0 0 0 chr20 54489848 54489868 -12178137 + (TTTC)n Simple_repeat Simple_repeat 1 20 0 726 143 0 0 chr20 54490244 54490370 -12177635 - L1MB3 LINE L1 0 6183 6058 635 248 171 69 chr20 54490840 54491231 -12176774 - LTR16C LTR ERVL 0 491 61 338 121 61 0 chr20 54491231 54491297 -12176708 + AluJ/FLAM SINE Alu 1 70 -232 792 265 26 0 chr20 54491299 54491488 -12176517 + MIR SINE MIR 48 241 -21 23 24 0 24 chr20 54491705 54491725 -12176280 + AT_rich Low_complexity Low_complexity 1 20 -20 1581 139 77 11 chr20 54491725 54491998 -12176007 + AluJb SINE Alu 21 311 -1 23 24 0 24 chr20 54491998 54492018 -12175987 + AT_rich Low_complexity Low_complexity 20 40 0 389 197 0 0 chr20 54492183 54492244 -12175761 + AluJ/FLAM SINE Alu 1 61 -241 190 276 10 10 chr20 54492344 54492442 -12175563 + (TATG)n Simple_repeat Simple_repeat 3 100 0 258 32 0 0 chr20 54492447 54492478 -12175527 + (CA)n Simple_repeat Simple_repeat 2 32 0 723 236 116 5 chr20 54493137 54493336 -12174669 + MER58A DNA MER1_type 2 222 -2 559 184 19 0 chr20 54493626 54493729 -12174276 - MER20 DNA MER1_type -5 214 110 423 52 0 0 chr20 54493869 54493927 -12174078 + (CA)n Simple_repeat Simple_repeat 2 59 0 2146 122 0 0 chr20 54493932 54494244 -12173761 - AluSx SINE Alu 0 312 1 353 265 75 54 chr20 54494277 54494424 -12173581 - L3b LINE CR1 -141 1442 1293 562 314 119 11 chr20 54494514 54494791 -12173214 - L2 LINE L2 -2 3311 3005 1997 145 72 20 chr20 54495015 54495360 -12172645 - THE1B LTR MaLR -1 363 1 315 333 105 9 chr20 54495879 54496042 -12171963 + MIR SINE MIR 27 203 -58 738 305 32 20 chr20 54496051 54496297 -12171708 - MIR SINE MIR 0 262 14 571 319 125 24 chr20 54496659 54497035 -12170970 - L2 LINE L2 -2 3311 2898 2083 57 9 111 chr20 54497095 54497428 -12170577 + AluY SINE Alu 1 299 -12 276 262 67 54 chr20 54497436 54497585 -12170420 - MER103 DNA DNA -8 158 8 277 230 0 81 chr20 54497721 54497808 -12170197 - L2 LINE L2 -6 3266 3187 2485 36 20 7 chr20 54498322 54498628 -12169377 - AluY SINE Alu -1 310 1 290 227 0 40 chr20 54499621 54499696 -12168309 - MIR SINE MIR -110 152 81 1664 152 55 3 chr20 54499764 54500054 -12167951 + AluSx SINE Alu 1 305 -7 213 344 38 44 chr20 54500299 54500459 -12167546 - MIR SINE MIR -30 232 74 866 200 57 19 chr20 54500477 54500687 -12167318 + MER20 DNA MER1_type 1 218 -1 904 125 54 150 chr20 54500752 54500992 -12167013 - MER20 DNA MER1_type -1 218 2 4333 82 25 8 chr20 54501209 54501805 -12166200 - L1PA10 LINE L1 0 6168 5563 1456 226 33 0 chr20 54502230 54502536 -12165469 - MER58B DNA MER1_type 0 341 26 277 196 18 0 chr20 54505842 54505898 -12162107 + MER20 DNA MER1_type 148 204 -15 2391 96 72 17 chr20 54505980 54506325 -12161680 + THE1B LTR MaLR 1 364 0 860 259 44 5 chr20 54506492 54506697 -12161308 - MER20 DNA MER1_type 0 219 7 2030 116 0 0 chr20 54506760 54507052 -12160953 - AluSx SINE Alu -20 292 1 25 31 0 0 chr20 54507078 54507110 -12160895 + AT_rich Low_complexity Low_complexity 1 32 0 885 147 0 22 chr20 54507195 54507331 -12160674 + FLAM_C SINE Alu 1 133 0 234 105 0 0 chr20 54507379 54507417 -12160588 + (TTTAG)n Simple_repeat Simple_repeat 3 40 0 1917 101 43 0 chr20 54507417 54507694 -12160311 - AluSx SINE Alu -23 289 1 232 222 32 32 chr20 54507713 54507776 -12160229 - MIR SINE MIR -65 143 81 2014 130 16 3 chr20 54507826 54508134 -12159871 + AluSx SINE Alu 1 312 0 649 239 44 19 chr20 54508172 54508331 -12159674 - MIR SINE MIR 0 262 100 4696 122 17 1 chr20 54508633 54509330 -12158675 - L1PB3 LINE L1 -1 6153 5446 408 78 0 3 chr20 54509332 54509398 -12158607 + L1PB3 LINE L1 5385 5449 -672 243 255 39 29 chr20 54509440 54509542 -12158463 - MLT1L LTR MaLR -6 609 507 1255 195 3 118 chr20 54509869 54510207 -12157798 + AluJb SINE Alu 3 301 -1 450 49 0 0 chr20 54510210 54510271 -12157734 + (CA)n Simple_repeat Simple_repeat 2 62 0 279 258 0 15 chr20 54510271 54510337 -12157668 - MLT1L LTR MaLR -550 65 1 1932 134 3 7 chr20 54510527 54510817 -12157188 - AluSx SINE Alu -23 289 1 291 280 143 3 chr20 54510871 54511046 -12156959 - MIR SINE MIR 0 262 18 205 345 0 0 chr20 54511842 54511900 -12156105 - L2 LINE L2 -9 3263 3206 2187 92 0 3 chr20 54512167 54512460 -12155545 - AluSg SINE Alu -18 292 1 655 290 88 9 chr20 54512461 54512678 -12155327 + MIR SINE MIR 19 252 -10 1915 135 0 16 chr20 54513162 54513498 -12154507 - AluSx SINE Alu 0 312 1 2124 128 0 0 chr20 54513838 54514150 -12153855 + AluSx SINE Alu 1 312 0 1062 273 110 41 chr20 54514151 54514284 -12153721 - MLT1K LTR MaLR -34 554 432 2550 158 22 2 chr20 54514284 54514701 -12153304 + MSTB LTR MaLR 2 426 0 1062 273 110 41 chr20 54514701 54514746 -12153259 - MLT1K LTR MaLR -156 432 392 1793 129 58 3 chr20 54514746 54515041 -12152964 - AluSx SINE Alu -1 311 1 1062 273 110 41 chr20 54515041 54515323 -12152682 - MLT1K LTR MaLR -196 392 61 2126 107 3 0 chr20 54515326 54515624 -12152381 + AluSp SINE Alu 1 299 -14 193 301 24 36 chr20 54515682 54515765 -12152240 + L2 LINE L2 3232 3313 0 21 0 0 0 chr20 54515993 54516014 -12151991 + AT_rich Low_complexity Low_complexity 1 21 0 534 256 7 15 chr20 54517143 54517280 -12150725 - L2 LINE L2 -1 3271 3136 267 240 62 73 chr20 54517286 54517382 -12150623 - MER5B DNA MER1_type 0 178 84 398 223 14 24 chr20 54517385 54517487 -12150518 - MER58 DNA MER1_type -105 110 24 331 293 30 10 chr20 54517510 54517609 -12150396 + MER5B DNA MER1_type 78 178 0 214 342 155 0 chr20 54517611 54517798 -12150207 - L2 LINE L2 -138 3175 2960 1927 86 3 73 chr20 54517869 54518233 -12149772 - AluY SINE Alu 0 343 1 1986 134 3 0 chr20 54518238 54518529 -12149476 - AluSx SINE Alu -20 292 1 253 295 32 42 chr20 54518529 54518624 -12149381 - MER58 DNA MER1_type -2311 109 16 281 338 61 20 chr20 54518624 54518772 -12149233 - L2 LINE L2 -349 2965 2812 245 288 25 25 chr20 54520170 54520250 -12147755 + MIR SINE MIR 57 136 -126 326 339 64 12 chr20 54520357 54520528 -12147477 + MIR SINE MIR 80 259 -3 325 188 130 0 chr20 54520673 54520742 -12147263 + MER81 DNA DNA 1 78 -36 194 167 28 97 chr20 54522572 54522644 -12145361 + MIR3 SINE MIR 12 78 -130 285 267 0 0 chr20 54522812 54522872 -12145133 + MLT1H LTR MaLR 231 290 -259 2219 77 0 50 chr20 54522929 54523252 -12144753 + AluY SINE Alu 1 307 -4 1633 217 61 19 chr20 54524014 54524463 -12143542 - L1MD3 LINE L1 0 7995 7335 3464 103 0 31 chr20 54524463 54524560 -12143445 - LOR1a LTR ERV1 0 497 399 2126 55 12 0 chr20 54524560 54524816 -12143189 - AluY SINE Alu -11 300 42 3464 103 0 31 chr20 54524816 54525230 -12142775 - LOR1a LTR ERV1 -98 399 2 1633 217 61 19 chr20 54525230 54525325 -12142680 - L1MD3 LINE L1 -660 7335 7245 308 291 43 17 chr20 54525406 54525523 -12142482 + MIR SINE MIR 67 186 -76 321 225 56 0 chr20 54525927 54526016 -12141989 + MIR SINE MIR 154 247 -15 557 264 25 12 chr20 54526043 54526206 -12141799 - L2 LINE L2 0 3313 3149 186 324 61 88 chr20 54526555 54526703 -12141302 + L2 LINE L2 3129 3272 0 1526 169 14 37 chr20 54527175 54527471 -12140534 - AluJo SINE Alu -23 289 1 305 315 154 0 chr20 54528409 54528539 -12139466 + L2 LINE L2 3123 3272 0 2227 121 3 0 chr20 54528965 54529263 -12138742 + AluSx SINE Alu 1 299 -13 186 103 0 0 chr20 54529789 54529818 -12138187 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 235 259 17 0 chr20 54530856 54530914 -12137091 - Charlie4 DNA MER1_type -8 1953 1895 2384 98 0 0 chr20 54530929 54531224 -12136781 + AluSg SINE Alu 1 295 -15 478 278 70 67 chr20 54531253 54531351 -12136654 + L2 LINE L2 2985 3081 -232 3198 136 12 4 chr20 54531351 54531843 -12136162 + LOR1a LTR ERV1 1 496 -1 478 278 70 67 chr20 54531843 54532057 -12135948 + L2 LINE L2 3081 3298 -15 43543 33 26 1 chr20 54532210 54538214 -12129791 - L1PA3 LINE L1 0 6155 1 1941 133 0 68 chr20 54538599 54538922 -12129083 + AluSx SINE Alu 3 303 -9 999 169 12 6 chr20 54538923 54539095 -12128910 - MLT1B LTR MaLR -217 173 1 208 335 80 11 chr20 54539499 54539687 -12128318 + MIR SINE MIR 50 250 -12 536 163 32 73 chr20 54539894 54540017 -12127988 + FLAM_C SINE Alu 5 122 -11 684 36 0 0 chr20 54540028 54540111 -12127894 + (GGAA)n Simple_repeat Simple_repeat 4 86 0 589 244 8 0 chr20 54540262 54540381 -12127624 + MER5B DNA MER1_type 1 120 -58 312 167 28 28 chr20 54540453 54540525 -12127480 + MIR SINE MIR 65 136 -126 293 330 64 61 chr20 54540772 54541114 -12126891 - L2 LINE L2 -20 3252 2910 1722 153 10 30 chr20 54541115 54541415 -12126590 - AluJo SINE Alu -18 294 1 916 188 0 12 chr20 54541419 54541579 -12126426 - FRAM SINE Alu -19 157 1 180 0 0 0 chr20 54541917 54541937 -12126068 + (TG)n Simple_repeat Simple_repeat 1 20 0 2096 125 0 0 chr20 54541937 54542218 -12125787 - AluSx SINE Alu -31 281 1 394 263 32 53 chr20 54542241 54542431 -12125574 + MIR SINE MIR 23 208 -54 243 139 0 0 chr20 54542614 54542634 -12125371 + (A)n Simple_repeat Simple_repeat 1 20 -23 2056 113 0 10 chr20 54542634 54542925 -12125080 + AluSg SINE Alu 23 310 0 243 139 0 0 chr20 54542925 54542947 -12125058 + (A)n Simple_repeat Simple_repeat 19 43 0 335 340 14 7 chr20 54543581 54543722 -12124283 + MIR SINE MIR 11 152 -110 430 204 0 11 chr20 54544210 54544303 -12123702 - MIR SINE MIR -108 154 63 204 67 0 0 chr20 54545336 54545366 -12122639 + (A)n Simple_repeat Simple_repeat 1 30 0 381 43 0 0 chr20 54545693 54545740 -12122265 + (TA)n Simple_repeat Simple_repeat 2 48 0 2109 116 14 0 chr20 54545909 54546185 -12121820 + AluSx SINE Alu 1 280 -32 927 118 0 0 chr20 54546185 54546338 -12121667 + (GGAA)n Simple_repeat Simple_repeat 3 155 0 568 191 0 40 chr20 54546342 54546567 -12121438 + GA-rich Low_complexity Low_complexity 1 216 0 240 35 0 0 chr20 54546567 54546596 -12121409 + (CAGG)n Simple_repeat Simple_repeat 2 30 0 2095 120 13 3 chr20 54547181 54547481 -12120524 + AluSx SINE Alu 1 303 -9 224 214 107 0 chr20 54547581 54547637 -12120368 + MIR SINE MIR 93 154 -108 569 330 129 29 chr20 54547961 54548441 -12119564 - L2 LINE L2 -1 3312 2881 2366 97 13 0 chr20 54548441 54548750 -12119255 - AluSp SINE Alu 0 313 1 569 330 129 29 chr20 54548750 54549218 -12118787 - L2 LINE L2 -432 2881 2267 43847 34 21 2 chr20 54549292 54555366 -12112639 + L1PA2 LINE L1 1 6155 0 320 290 22 22 chr20 54555380 54555518 -12112487 - MER20B DNA MER1_type 0 783 646 2297 118 0 10 chr20 54555530 54555844 -12112161 + AluSx SINE Alu 1 311 -1 367 290 161 6 chr20 54555868 54556030 -12111975 - MER5A DNA MER1_type 0 189 3 1227 256 31 0 chr20 54556033 54556350 -12111655 - MER20B DNA MER1_type -231 552 226 876 210 5 67 chr20 54556344 54556568 -12111437 + MER20 DNA MER1_type 5 214 -5 * 1793 132 0 80 chr20 54556615 54556711 -12111294 + AluJo SINE Alu 13 115 -197 2354 108 0 0 chr20 54556711 54557016 -12110989 - AluSq SINE Alu -8 305 1 1793 132 0 80 chr20 54557016 54557245 -12110760 + AluJo SINE Alu 115 312 0 302 287 79 30 chr20 54557273 54557374 -12110631 - MER20B DNA MER1_type -620 163 58 24 53 0 0 chr20 54557633 54557671 -12110334 + AT_rich Low_complexity Low_complexity 1 38 0 1899 158 0 31 chr20 54557937 54558259 -12109746 + AluJo SINE Alu 1 312 0 2377 93 3 10 chr20 54558469 54558782 -12109223 + AluSp SINE Alu 1 311 -2 695 45 0 0 chr20 54559175 54559264 -12108741 + L1MA1 LINE L1 6214 6302 0 1920 161 0 10 chr20 54559268 54559579 -12108426 + AluJb SINE Alu 1 308 -4 21 0 0 0 chr20 54559579 54559600 -12108405 + AT_rich Low_complexity Low_complexity 1 21 0 607 133 177 9 chr20 54559800 54559913 -12108092 + AluJo SINE Alu 1 132 -170 389 231 39 0 chr20 54559914 54559992 -12108013 + AluJo SINE Alu 132 212 -90 1085 139 24 0 chr20 54559993 54560158 -12107847 + AluJ SINE Alu 114 282 -30 26 0 0 0 chr20 54560189 54560215 -12107790 + AT_rich Low_complexity Low_complexity 1 26 0 565 161 15 85 chr20 54560299 54560429 -12107576 + MER103 DNA DNA 11 131 -35 233 328 8 30 chr20 54560924 54561030 -12106975 + MIR SINE MIR 17 121 -141 2094 145 0 0 chr20 54561030 54561333 -12106672 - AluSx SINE Alu -9 303 1 233 328 8 30 chr20 54561333 54561357 -12106648 + MIR SINE MIR 121 144 -118 437 285 30 34 chr20 54561770 54562005 -12106000 + L1ME4a LINE L1 5602 5835 -286 2211 126 0 0 chr20 54562074 54562367 -12105638 + AluSx SINE Alu 1 293 -19 2512 162 26 26 chr20 54562514 54563021 -12104984 - L1MB3 LINE L1 -2 6181 5675 23 0 0 0 chr20 54563026 54563049 -12104956 + AT_rich Low_complexity Low_complexity 1 23 0 1246 206 94 0 chr20 54563068 54563345 -12104660 + AluJb SINE Alu 1 303 -9 1475 154 15 8 chr20 54563345 54563598 -12104407 - L1PA16 LINE L1 -10 6156 5902 189 0 0 0 chr20 54563920 54563941 -12104064 + (A)n Simple_repeat Simple_repeat 1 21 0 401 232 27 18 chr20 54566945 54567057 -12100948 - L2 LINE L2 -4 3309 3197 2229 113 0 10 chr20 54570650 54570952 -12097053 + AluSx SINE Alu 1 299 -13 21 36 0 0 chr20 54571833 54571861 -12096144 + AT_rich Low_complexity Low_complexity 1 28 0 201 74 0 0 chr20 54572158 54572185 -12095820 + (T)n Simple_repeat Simple_repeat 1 27 0 237 244 0 0 chr20 54572744 54572789 -12095216 - L2 LINE L2 -2 3270 3226 229 321 49 0 chr20 54572822 54572903 -12095102 + MIR SINE MIR 15 99 -163 2385 82 0 0 chr20 54572930 54573223 -12094782 + AluY SINE Alu 2 294 -17 342 302 228 22 chr20 54573377 54573609 -12094396 + L2 LINE L2 2462 2741 -573 998 238 23 5 chr20 54573611 54573825 -12094180 - MER58A DNA MER1_type -3 221 4 1514 238 31 42 chr20 54573859 54574284 -12093721 - LTR16C LTR ERVL 0 491 72 2470 92 0 0 chr20 54574392 54574697 -12093308 - AluSx SINE Alu -7 305 1 291 297 50 10 chr20 54575010 54575111 -12092894 + L2 LINE L2 3208 3312 -1 2189 122 3 0 chr20 54575478 54575772 -12092233 + AluSx SINE Alu 1 295 -17 2318 92 0 0 chr20 54575788 54576082 -12091923 + AluY SINE Alu 4 326 0 262 0 0 0 chr20 54576082 54576111 -12091894 + (TAA)n Simple_repeat Simple_repeat 2 180 0 1809 162 0 6 chr20 54576113 54576427 -12091578 + AluSx SINE Alu 1 312 0 207 0 0 0 chr20 54576706 54576729 -12091276 + (CA)n Simple_repeat Simple_repeat 2 24 0 1032 156 0 0 chr20 54576840 54577020 -12090985 + (TA)n Simple_repeat Simple_repeat 1 180 0 874 303 86 44 chr20 54577028 54577530 -12090475 + L1ME LINE L1 5292 5816 -305 2242 98 0 9 chr20 54577700 54578015 -12089990 - AluSx SINE Alu 0 312 1 584 59 24 0 chr20 54578077 54578162 -12089843 + Alu SINE Alu 223 309 0 382 285 30 21 chr20 54578169 54578303 -12089702 - L1MC4 LINE L1 -1334 6708 6608 2062 119 3 7 chr20 54578348 54578658 -12089347 - AluSc SINE Alu 0 309 1 237 65 0 0 chr20 54578687 54578718 -12089287 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 2075 116 0 0 chr20 54578719 54579012 -12088993 - AluSg SINE Alu -17 293 1 957 231 28 20 chr20 54579341 54579596 -12088409 - MIR SINE MIR -2 260 4 704 241 20 22 chr20 54579596 54579823 -12088182 + MER58A DNA MER1_type 1 226 0 281 259 49 0 chr20 54579823 54579899 -12088106 + MER58A DNA MER1_type 143 222 -2 192 363 11 11 chr20 54579904 54579995 -12088010 + L2 LINE L2 3183 3273 -40 1781 166 0 3 chr20 54580055 54580344 -12087661 + AluJb SINE Alu 1 288 -24 755 156 7 0 chr20 54580344 54580485 -12087520 + GA-rich Low_complexity Low_complexity 1 142 0 43658 33 22 1 chr20 54580499 54586522 -12081483 + L1PA2 LINE L1 4 6153 -2 206 278 215 56 chr20 54586609 54586753 -12081252 - MIR SINE MIR -76 186 20 1901 199 59 83 chr20 54587729 54588256 -12079749 + MLT2B3 LTR ERVL 1 514 -40 2152 121 0 6 chr20 54588266 54588580 -12079425 + AluSx SINE Alu 1 312 0 1156 141 0 21 chr20 54588580 54588771 -12079234 + AluSq SINE Alu 126 312 -1 289 163 0 0 chr20 54588775 54588824 -12079181 + MLT2A2 LTR ERVL 399 447 -6 709 197 33 13 chr20 54589187 54589339 -12078666 + MER106A DNA MER1_type 1 155 -81 831 142 0 8 chr20 54589348 54589482 -12078523 + FLAM_C SINE Alu 1 133 0 267 197 26 53 chr20 54589534 54589610 -12078395 + MER106A DNA MER1_type 146 219 -17 1515 142 3 71 chr20 54589626 54589921 -12078084 + AluJo SINE Alu 14 288 -24 257 308 88 69 chr20 54589955 54590114 -12077891 - MIR SINE MIR -87 175 14 378 277 21 0 chr20 54590159 54590253 -12077752 + MER5A DNA MER1_type 6 101 -88 574 229 121 0 chr20 54590833 54590999 -12077006 - MER5A DNA MER1_type 0 189 4 299 297 33 77 chr20 54591017 54591083 -12076922 + MER5A DNA MER1_type 10 77 -112 1133 168 18 46 chr20 54591083 54591238 -12076767 + L1MA4 LINE L1 6017 6162 -138 1278 185 75 43 chr20 54591238 54591519 -12076486 - AluJo SINE Alu -22 290 1 1133 168 18 46 chr20 54591519 54591648 -12076357 + L1MA4 LINE L1 6162 6293 -7 299 297 33 77 chr20 54591648 54591763 -12076242 + MER5A DNA MER1_type 77 183 -6 388 246 37 45 chr20 54591775 54591909 -12076096 + MER5B DNA MER1_type 14 146 -32 909 119 0 0 chr20 54592082 54592216 -12075789 + AluSq/x SINE Alu 1 134 -179 213 39 0 0 chr20 54592460 54592486 -12075519 + (TG)n Simple_repeat Simple_repeat 2 27 0 2021 113 17 0 chr20 54593021 54593313 -12074692 - AluSx SINE Alu -15 297 1 2103 115 3 0 chr20 54593321 54593625 -12074380 - AluSc SINE Alu -4 305 1 488 312 19 19 chr20 54593703 54593860 -12074145 - L2 LINE L2 -5 3308 3152 3013 119 46 19 chr20 54593870 54594347 -12073658 + MER1A DNA MER1_type 1 490 -39 809 148 15 15 chr20 54594456 54594591 -12073414 - AluSg/x SINE Alu -14 298 164 205 270 0 27 chr20 54594591 54594665 -12073340 + A-rich Low_complexity Low_complexity 4 75 0 200 236 18 0 chr20 54594715 54594770 -12073235 + A-rich Low_complexity Low_complexity 2 57 0 45 16 0 16 chr20 54594843 54594869 -12073136 + AT_rich Low_complexity Low_complexity 1 26 -36 2268 90 0 3 chr20 54594869 54595179 -12072826 + AluSg SINE Alu 1 309 -1 45 16 0 16 chr20 54595179 54595215 -12072790 + AT_rich Low_complexity Low_complexity 26 62 0 22 0 0 0 chr20 54595463 54595485 -12072520 + AT_rich Low_complexity Low_complexity 1 22 0 1052 215 14 5 chr20 54595531 54595754 -12072251 - MER58B DNA MER1_type 0 341 117 1899 129 7 10 chr20 54595756 54596050 -12071955 - AluSx SINE Alu -19 293 1 1747 161 7 0 chr20 54596734 54597026 -12070979 - AluJb SINE Alu -18 294 1 266 215 15 15 chr20 54597156 54597221 -12070784 + HAL1 LINE L1 2443 2507 0 2225 100 3 0 chr20 54597473 54597773 -12070232 - AluSq SINE Alu -12 301 1 191 61 30 0 chr20 54597776 54597809 -12070196 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 577 234 31 0 chr20 54597817 54597945 -12070060 - MER33 DNA MER1_type -176 148 17 467 290 161 0 chr20 54597972 54598127 -12069878 + MER5A DNA MER1_type 4 183 -6 323 318 16 39 chr20 54598191 54598320 -12069685 - L2 LINE L2 -3 3310 3185 2023 105 10 0 chr20 54598339 54598625 -12069380 + AluSx SINE Alu 2 293 -19 1069 113 11 6 chr20 54598625 54598802 -12069203 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 269 239 56 0 chr20 54598865 54598936 -12069069 + MIR SINE MIR 63 137 -125 1667 162 16 7 chr20 54598992 54599295 -12068710 - AluSx SINE Alu -6 306 1 459 243 38 65 chr20 54599383 54599569 -12068436 - MLT1K LTR MaLR -358 230 87 2146 111 3 0 chr20 54599673 54599971 -12068034 + AluSq SINE Alu 1 299 -14 2018 131 0 10 chr20 54600089 54600394 -12067611 + AluSx SINE Alu 1 302 -10 3184 56 7 2 chr20 54600394 54600802 -12067203 + L1PA8 LINE L1 5757 6166 -6 269 330 27 7 chr20 54600805 54600944 -12067061 + L1ME LINE L1 5594 5719 -451 1380 257 86 20 chr20 54601544 54601999 -12066006 + MLT1H1 LTR MaLR 3 487 -68 26 64 0 0 chr20 54602011 54602058 -12065947 + AT_rich Low_complexity Low_complexity 1 47 0 228 213 66 0 chr20 54602188 54602249 -12065756 + MLT1H1 LTR MaLR 477 541 -8 266 203 29 29 chr20 54602374 54602412 -12065593 + CT-rich Low_complexity Low_complexity 5 45 -28 2466 52 3 0 chr20 54602412 54602719 -12065286 - AluY SINE Alu -3 308 1 266 203 29 29 chr20 54602719 54602749 -12065256 + CT-rich Low_complexity Low_complexity 44 73 0 325 355 58 26 chr20 54602751 54602906 -12065099 - L2 LINE L2 -1 3271 3112 25 0 0 0 chr20 54602940 54602965 -12065040 + AT_rich Low_complexity Low_complexity 1 25 0 446 238 9 0 chr20 54602975 54603080 -12064925 - MIR SINE MIR -54 208 103 1515 137 99 0 chr20 54603102 54603364 -12064641 + AluJo SINE Alu 12 299 -13 216 292 44 35 chr20 54603392 54603505 -12064500 - L2 LINE L2 -946 2368 2255 1197 184 13 0 chr20 54603528 54603756 -12064249 + L1MB3 LINE L1 5943 6173 -10 225 246 0 49 chr20 54603756 54603817 -12064188 + Charlie8 DNA MER1_type 122 179 -2238 1963 131 27 0 chr20 54604517 54604815 -12063190 - AluSc SINE Alu -3 306 1 2088 123 0 0 chr20 54604821 54605113 -12062892 - AluSx SINE Alu -20 292 1 21 0 0 0 chr20 54605115 54605136 -12062869 + AT_rich Low_complexity Low_complexity 1 21 0 1215 196 127 73 chr20 54605200 54605247 -12062758 - MLT1C LTR MaLR -3 464 421 1779 152 0 7 chr20 54605247 54605550 -12062455 - AluJo SINE Alu -11 301 1 1215 196 127 73 chr20 54605550 54605942 -12062063 - MLT1C LTR MaLR -46 421 1 1996 128 13 16 chr20 54606169 54606481 -12061524 + AluSx SINE Alu 1 311 -1 201 143 0 0 chr20 54606499 54606527 -12061478 + MER91B DNA MER1_type 32 59 -131 426 320 8 0 chr20 54606594 54606719 -12061286 + MIR SINE MIR 23 148 -114 266 266 223 0 chr20 54606755 54606849 -12061156 + MIR SINE MIR 137 251 -11 207 0 0 0 chr20 54607010 54607033 -12060972 + (A)n Simple_repeat Simple_repeat 1 23 0 1914 143 37 23 chr20 54607046 54607396 -12060609 + THE1A LTR MaLR 1 355 0 459 0 0 0 chr20 54607508 54607559 -12060446 + (CA)n Simple_repeat Simple_repeat 1 51 0 544 246 28 11 chr20 54607628 54607776 -12060229 - MIR3 SINE MIR -49 159 6 2032 116 7 0 chr20 54607835 54608128 -12059877 + AluSx SINE Alu 1 295 -17 1003 185 95 0 chr20 54608216 54608416 -12059589 + MER20 DNA MER1_type 1 219 0 541 175 19 0 chr20 54608426 54608529 -12059476 + MER5A DNA MER1_type 4 108 -81 462 242 0 91 chr20 54608621 54608753 -12059252 + MER5B DNA MER1_type 1 120 -58 1089 76 0 0 chr20 54608755 54608899 -12059106 - AluSg/x SINE Alu -13 299 156 775 135 0 24 chr20 54608900 54609026 -12058979 + FLAM_A SINE Alu 14 136 -6 1311 266 27 7 chr20 54609027 54609430 -12058575 - Charlie4a DNA MER1_type -81 427 17 2000 131 0 3 chr20 54609548 54609846 -12058159 + AluY SINE Alu 1 297 -14 1778 162 0 10 chr20 54609859 54610162 -12057843 + AluJo SINE Alu 1 300 -12 251 163 87 120 chr20 54610180 54610272 -12057733 + MLT1F1 LTR MaLR 21 109 -458 420 230 22 7 chr20 54610282 54610417 -12057588 + CT-rich Low_complexity Low_complexity 1 137 0 1904 152 0 3 chr20 54610417 54610719 -12057286 - AluSx SINE Alu -10 302 2 338 274 0 0 chr20 54610720 54610793 -12057212 + MLT1F1 LTR MaLR 98 170 -397 237 163 125 113 chr20 54610874 54610954 -12057051 + MLT1H LTR MaLR 423 503 -46 221 340 30 20 chr20 54610954 54611054 -12056951 - L2 LINE L2 -203 3069 2969 21 0 0 0 chr20 54611406 54611427 -12056578 + AT_rich Low_complexity Low_complexity 1 21 0 896 310 34 8 chr20 54611766 54612034 -12055971 + MLT1K LTR MaLR 10 284 -304 2198 117 0 0 chr20 54612049 54612358 -12055647 - AluSx SINE Alu -3 309 1 688 207 138 35 chr20 54612490 54612693 -12055312 + MER58A DNA MER1_type 1 224 0 1846 136 3 22 chr20 54613097 54613442 -12054563 + AluJb SINE Alu 1 339 0 2141 116 0 3 chr20 54613541 54613835 -12054170 + AluSx SINE Alu 1 293 -19 819 273 38 0 chr20 54613913 54614122 -12053883 - MIR SINE MIR 0 262 46 2297 84 0 0 chr20 54614211 54614507 -12053498 - AluSg SINE Alu -14 296 1 2140 104 0 10 chr20 54614692 54614990 -12053015 + AluSx SINE Alu 1 295 -17 377 148 49 37 chr20 54615562 54615643 -12052362 + MER96B DNA MER1_type? 24 105 -312 1412 170 50 36 chr20 54615643 54615920 -12052085 - AluJb SINE Alu -14 298 18 392 107 0 27 chr20 54615920 54615995 -12052010 - MER96B DNA MER1_type? -102 315 243 187 279 73 0 chr20 54616357 54616425 -12051580 - L2 LINE L2 0 3313 3241 2132 114 0 0 chr20 54616605 54616894 -12051111 - AluSx SINE Alu -23 289 1 699 229 13 19 chr20 54617033 54617190 -12050815 + FAM SINE Alu 1 156 -19 1869 140 3 3 chr20 54617215 54617529 -12050476 + AluSx SINE Alu 1 312 0 1608 182 3 0 chr20 54617539 54617825 -12050180 + AluJb SINE Alu 3 289 -23 2087 101 14 7 chr20 54617835 54618132 -12049873 - AluY SINE Alu -12 299 1 1854 110 9 52 chr20 54618159 54618486 -12049519 + AluSq SINE Alu 1 313 0 26 0 0 0 chr20 54618697 54618723 -12049282 + AT_rich Low_complexity Low_complexity 1 26 0 2106 78 50 0 chr20 54618724 54619006 -12048999 + AluSx SINE Alu 1 296 -16 1553 226 9 3 chr20 54619328 54619551 -12048454 - MER58B DNA MER1_type -2079 341 114 2199 112 0 10 chr20 54619551 54619863 -12048142 - AluSx SINE Alu -3 309 1 1553 226 9 3 chr20 54619863 54619967 -12048038 - MER58B DNA MER1_type -2306 114 12 1992 103 7 4 chr20 54620065 54620368 -12047637 + AluSq SINE Alu 4 307 0 194 312 14 109 chr20 54620559 54620631 -12047374 - MIR SINE MIR -4 258 204 1823 151 3 13 chr20 54620631 54620929 -12047076 + AluJb SINE Alu 2 296 -16 194 312 14 109 chr20 54620929 54620994 -12047011 - MIR SINE MIR -58 204 134 1104 186 43 0 chr20 54621047 54621257 -12046748 - MER20 DNA MER1_type 0 219 1 777 83 18 0 chr20 54621262 54621371 -12046634 + HY1 scRNA scRNA 1 111 -1 28 29 0 0 chr20 54621375 54621410 -12046595 + AT_rich Low_complexity Low_complexity 1 35 0 2278 68 0 0 chr20 54621455 54621735 -12046270 + AluSc SINE Alu 5 284 -25 255 103 0 0 chr20 54621741 54621780 -12046225 + (TG)n Simple_repeat Simple_repeat 2 40 0 254 124 80 9 chr20 54621771 54621884 -12046121 + (TA)n Simple_repeat Simple_repeat 2 122 0 * 494 266 55 29 chr20 54622106 54622414 -12045591 + L1ME4a LINE L1 5602 5917 -204 2076 104 10 0 chr20 54622415 54622712 -12045293 + AluSq SINE Alu 1 300 -13 2035 122 14 0 chr20 54622789 54623084 -12044921 + AluSx SINE Alu 1 299 -13 401 274 105 0 chr20 54623273 54623397 -12044608 + MIR SINE MIR 123 259 -3 1454 204 4 0 chr20 54623855 54624174 -12043831 - AluJo SINE Alu 0 320 1 2201 76 3 0 chr20 54624841 54625122 -12042883 + AluY SINE Alu 1 285 -26 246 32 0 0 chr20 54625122 54625153 -12042852 + (TTAA)n Simple_repeat Simple_repeat 3 33 0 1674 180 0 3 chr20 54625463 54625783 -12042222 + AluJb SINE Alu 1 319 0 1565 196 7 3 chr20 54625824 54626125 -12041880 + AluJo SINE Alu 1 302 -10 2534 172 46 50 chr20 54626222 54626388 -12041617 + L1MB5 LINE L1 5614 5779 -395 2451 122 48 31 chr20 54626388 54626427 -12041578 - MSTA LTR MaLR 0 428 391 2231 92 3 0 chr20 54626427 54626731 -12041274 + AluSg SINE Alu 1 305 -5 2451 122 48 31 chr20 54626731 54627110 -12040895 - MSTA LTR MaLR -37 391 3 2534 172 46 50 chr20 54627110 54627214 -12040791 + L1MB5 LINE L1 5779 5882 -292 1660 142 7 45 chr20 54627214 54627524 -12040481 + AluJb SINE Alu 1 298 -14 2534 172 46 50 chr20 54627524 54627798 -12040207 + L1MB5 LINE L1 5882 6157 -17 369 0 0 0 chr20 54628006 54628047 -12039958 + (TG)n Simple_repeat Simple_repeat 2 42 0 1209 106 4 2 chr20 54628048 54628284 -12039721 - AluSp SINE Alu -33 280 2 441 286 34 51 chr20 54628284 54628373 -12039632 + MIR SINE MIR 70 156 -106 1752 159 0 3 chr20 54628373 54628662 -12039343 - AluJo SINE Alu -1 311 24 441 286 34 51 chr20 54628662 54628747 -12039258 + MIR SINE MIR 156 241 -21 354 23 0 0 chr20 54628807 54628850 -12039155 + (CA)n Simple_repeat Simple_repeat 2 44 0 317 294 28 28 chr20 54628850 54628950 -12039055 + MIR SINE MIR 26 128 -134 2295 88 0 0 chr20 54629062 54629359 -12038646 + AluSx SINE Alu 6 302 -10 1773 183 85 51 chr20 54629510 54629959 -12038046 + L1MD3 LINE L1 7510 7973 -22 1903 121 13 16 chr20 54629959 54630266 -12037739 + AluSx SINE Alu 1 306 -6 2075 88 22 0 chr20 54630291 54630565 -12037440 + AluSg SINE Alu 1 280 -30 2161 101 0 0 chr20 54631020 54631318 -12036687 - AluSq SINE Alu -15 298 1 2270 86 7 0 chr20 54631374 54631675 -12036330 - AluSc SINE Alu -6 303 1 253 312 71 92 chr20 54631816 54632098 -12035907 - L2 LINE L2 -5 3267 2992 1835 93 8 0 chr20 54632142 54632388 -12035617 + AluSx SINE Alu 53 300 -12 2203 101 0 0 chr20 54632777 54633074 -12034931 - AluSq SINE Alu -16 297 1 1808 160 0 10 chr20 54633263 54633563 -12034442 - AluJb SINE Alu -15 297 1 244 268 28 0 chr20 54634021 54634092 -12033913 + L2 LINE L2 2708 2780 -534 1894 144 3 7 chr20 54634097 54634395 -12033610 + AluSx SINE Alu 1 297 -15 1987 96 3 7 chr20 54634397 54634731 -12033274 + AluSg1 SINE Alu 1 333 0 1843 132 13 41 chr20 54634735 54635053 -12032952 + AluSx SINE Alu 1 309 -3 1432 164 26 61 chr20 54635136 54635446 -12032559 + AluJo SINE Alu 1 299 -13 389 300 0 0 chr20 54635457 54635547 -12032458 - L1MC4 LINE L1 -1339 6703 6614 380 258 0 43 chr20 54635469 54635562 -12032443 + L1MC4 LINE L1 6614 6702 -1340 * 1070 288 65 13 chr20 54635567 54635952 -12032053 - L1ME3A LINE L1 -24 6146 5742 892 132 0 0 chr20 54635977 54636106 -12031899 - FLAM_C SINE Alu -2 131 3 2068 132 3 0 chr20 54636250 54636561 -12031444 + AluSx SINE Alu 1 312 0 2272 98 3 0 chr20 54636715 54637022 -12030983 - AluSp SINE Alu -5 308 1 1944 104 0 4 chr20 54637416 54637686 -12030319 + AluSx SINE Alu 1 269 -43 442 136 0 23 chr20 54637706 54637794 -12030211 + (GGAA)n Simple_repeat Simple_repeat 3 88 0 29 47 0 0 chr20 54637924 54637967 -12030038 + AT_rich Low_complexity Low_complexity 1 43 0 887 139 63 112 chr20 54638399 54638470 -12029535 + AluJo SINE Alu 85 158 -154 1744 132 56 7 chr20 54638470 54638757 -12029248 + AluSx SINE Alu 1 301 -11 887 139 63 112 chr20 54638757 54638908 -12029097 + AluJo SINE Alu 158 296 -16 1596 141 0 52 chr20 54638933 54639223 -12028782 - AluJo SINE Alu -37 275 1 829 120 0 0 chr20 54639223 54639348 -12028657 - AluJo SINE Alu -177 135 11 2017 114 30 0 chr20 54639364 54639663 -12028342 - AluSx SINE Alu -4 308 1 291 208 104 0 chr20 54639665 54639771 -12028234 + Charlie1 DNA MER1_type 2563 2679 -82 2547 48 0 3 chr20 54639771 54640082 -12027923 - AluY SINE Alu -1 310 1 579 66 0 0 chr20 54640253 54640329 -12027676 + (TCCCC)n Simple_repeat Simple_repeat 1 76 0 1868 147 0 0 chr20 54640335 54640627 -12027378 - AluSx SINE Alu -20 292 1 253 258 32 129 chr20 54640676 54640800 -12027205 + L2 LINE L2 3160 3271 -1 21 0 0 0 chr20 54640885 54640906 -12027099 + AT_rich Low_complexity Low_complexity 1 21 0 369 0 0 0 chr20 54640919 54640960 -12027045 + (TG)n Simple_repeat Simple_repeat 1 41 0 322 266 55 18 chr20 54641012 54641121 -12026884 + L1MC5 LINE L1 5897 6009 -1799 2081 114 3 0 chr20 54641126 54641416 -12026589 + AluSx SINE Alu 1 291 -21 2071 106 0 7 chr20 54641443 54641736 -12026269 + AluY SINE Alu 1 291 -20 796 261 72 90 chr20 54641866 54642091 -12025914 + L1MC5 LINE L1 6562 6789 -1172 1432 117 26 126 chr20 54642091 54642432 -12025573 - AluYb8 SINE Alu -11 307 1 796 261 72 90 chr20 54642432 54642791 -12025214 + L1MC5 LINE L1 6789 7148 -813 2160 119 0 0 chr20 54642862 54643174 -12024831 + AluSx SINE Alu 1 312 0 2010 124 0 3 chr20 54643184 54643475 -12024530 - AluSx SINE Alu -11 301 12 841 140 0 7 chr20 54643521 54643664 -12024341 + FRAM SINE Alu 1 40 0 25 0 0 0 chr20 54644473 54644498 -12023507 + AT_rich Low_complexity Low_complexity 1 25 0 2157 90 10 7 chr20 54646032 54646331 -12021674 - AluSx SINE Alu -12 300 1 697 122 157 0 chr20 54646486 54646601 -12021404 + FRAM SINE Alu 26 158 -18 207 257 128 37 chr20 54647461 54647570 -12020435 + MIR SINE MIR 21 139 -123 872 206 25 0 chr20 54647594 54647754 -12020251 - MER58B DNA MER1_type -3 338 175 265 268 37 37 chr20 54647812 54647894 -12020111 + MIR SINE MIR 180 261 -1 1580 113 8 23 chr20 54648061 54648317 -12019688 - AluSx SINE Alu -23 289 38 1254 136 4 40 chr20 54648855 54649083 -12018922 + AluJb SINE Alu 85 304 -8 525 146 0 154 chr20 54649626 54649749 -12018256 + MER2 DNA MER2_type 1 104 -241 1503 89 9 9 chr20 54649773 54649986 -12018019 - AluSp SINE Alu -15 298 86 326 91 0 0 chr20 54649988 54650032 -12017973 - AluSp SINE Alu -258 44 1 1626 168 0 14 chr20 54650090 54650405 -12017600 - AluSx SINE Alu 0 312 2 1348 122 4 63 chr20 54650406 54650437 -12017568 + MER2 DNA MER2_type 121 152 -193 1979 133 3 0 chr20 54650437 54650731 -12017274 + AluSx SINE Alu 2 296 -16 1348 122 4 63 chr20 54650731 54650936 -12017069 + MER2 DNA MER2_type 152 343 -2 222 371 48 9 chr20 54651027 54651132 -12016873 - L2 LINE L2 -21 3251 3143 2253 96 3 0 chr20 54651160 54651472 -12016533 + AluSq SINE Alu 1 313 0 766 178 8 0 chr20 54651710 54651839 -12016166 + FLAM_C SINE Alu 2 131 -12 1225 219 42 11 chr20 54651847 54652130 -12015875 + AluJo SINE Alu 1 292 -20 369 232 33 127 chr20 54652136 54652317 -12015688 - MER106B DNA MER1_type -895 164 1 635 224 40 20 chr20 54654144 54654296 -12013709 - MIR SINE MIR -67 195 41 2084 93 0 50 chr20 54654463 54654785 -12013220 + AluSx SINE Alu 3 308 -4 278 296 20 20 chr20 54656443 54656541 -12011464 - MIR SINE MIR -119 143 46 971 163 42 28 chr20 54657573 54657788 -12010217 - MER20 DNA MER1_type -1 218 1 23 0 0 0 chr20 54657853 54657876 -12010129 + AT_rich Low_complexity Low_complexity 1 23 0 362 323 79 0 chr20 54657885 54658012 -12009993 - MIR3 SINE MIR -42 166 30 216 239 65 0 chr20 54661464 54661510 -12006495 - L2 LINE L2 0 3272 3224 207 0 0 0 chr20 54661743 54661766 -12006239 + (A)n Simple_repeat Simple_repeat 1 23 0 1555 151 60 21 chr20 54661925 54662210 -12005795 + AluSx SINE Alu 1 296 -16 457 225 70 42 chr20 54662744 54662886 -12005119 + L2 LINE L2 3165 3310 -3 23 0 0 0 chr20 54664525 54664548 -12003457 + AT_rich Low_complexity Low_complexity 1 23 0 303 104 0 0 chr20 54665226 54665274 -12002731 + (TA)n Simple_repeat Simple_repeat 1 48 0 237 65 0 0 chr20 54669484 54669515 -11998490 + (A)n Simple_repeat Simple_repeat 1 31 0 40 73 0 0 chr20 54670316 54670398 -11997607 + GC_rich Low_complexity Low_complexity 1 82 0 239 268 0 0 chr20 54670487 54670543 -11997462 + G-rich Low_complexity Low_complexity 101 156 0 280 250 6 67 chr20 54670932 54671112 -11996893 + C-rich Low_complexity Low_complexity 1 169 0 21 0 0 0 chr20 54671240 54671261 -11996744 + GC_rich Low_complexity Low_complexity 1 21 0 183 129 0 0 chr20 54671682 54671713 -11996292 + (A)n Simple_repeat Simple_repeat 1 31 0 249 33 0 0 chr20 54673731 54673761 -11994244 + (A)n Simple_repeat Simple_repeat 1 30 0 225 65 0 0 chr20 54674236 54674267 -11993738 + (TA)n Simple_repeat Simple_repeat 1 31 0 630 301 126 0 chr20 54674922 54675208 -11992797 - L2 LINE L2 -996 2318 1997 365 326 42 21 chr20 54675646 54675790 -11992215 + MIR SINE MIR 6 152 -110 398 295 196 47 chr20 54675918 54676301 -11991704 - L2 LINE L2 -42 3271 2832 636 304 137 22 chr20 54676346 54676704 -11991301 + L2 LINE L2 1922 2320 -994 1299 159 25 15 chr20 54676892 54677163 -11990842 + AluJb SINE Alu 11 283 -29 214 60 20 40 chr20 54677163 54677213 -11990792 + (CAAAA)n Simple_repeat Simple_repeat 2 90 0 214 300 17 0 chr20 54677233 54677293 -11990712 - L2 LINE L2 -508 2806 2746 448 243 22 29 chr20 54677293 54677429 -11990576 - HAL1b LINE L1 -279 1069 935 683 103 0 3 chr20 54677432 54677665 -11990340 + AluSg SINE Alu 2 309 0 243 255 0 0 chr20 54677665 54677716 -11990289 - MIR SINE MIR -138 124 74 2413 80 0 3 chr20 54678070 54678384 -11989621 - AluSq SINE Alu 0 313 1 1462 157 37 53 chr20 54678406 54678546 -11989459 + AluJb SINE Alu 3 144 -168 2160 71 14 7 chr20 54678546 54678842 -11989163 + AluY SINE Alu 1 298 -13 1462 157 37 53 chr20 54678842 54679000 -11989005 + AluJb SINE Alu 144 296 -16 389 269 26 58 chr20 54679458 54679614 -11988391 - L2 LINE L2 -4 3309 3159 300 277 91 0 chr20 54679632 54679765 -11988240 + L1MC/D LINE L1 5642 5789 -373 2231 81 0 7 chr20 54679795 54680091 -11987914 + AluSg SINE Alu 1 294 -16 2041 83 43 0 chr20 54680107 54680385 -11987620 + AluSx SINE Alu 1 290 -22 1814 99 75 14 chr20 54680797 54681079 -11986926 - AluSx SINE Alu -13 299 1 2130 102 0 3 chr20 54681087 54681391 -11986614 - AluSq SINE Alu -10 303 1 1198 291 104 12 chr20 54681426 54681955 -11986050 - L2 LINE L2 -6 3307 2729 1816 108 17 37 chr20 54682147 54682443 -11985562 + AluSq SINE Alu 13 302 -11 903 152 73 0 chr20 54682446 54682610 -11985395 + AluJb SINE Alu 137 312 0 1773 129 14 0 chr20 54682670 54682948 -11985057 + AluSx SINE Alu 31 312 0 316 263 123 83 chr20 54682955 54683183 -11984822 - MIR SINE MIR -13 249 13 285 318 47 20 chr20 54683364 54683512 -11984493 + MIR SINE MIR 10 161 -101 1375 141 104 54 chr20 54683514 54683811 -11984194 + AluJo SINE Alu 1 312 0 2300 77 0 0 chr20 54683818 54684117 -11983888 + AluY SINE Alu 1 299 -12 198 0 0 0 chr20 54684117 54684139 -11983866 + (TA)n Simple_repeat Simple_repeat 2 23 0 1061 74 0 0 chr20 54684139 54684274 -11983731 + AluSq/x SINE Alu 2 136 -177 25 0 0 0 chr20 54684300 54684325 -11983680 + AT_rich Low_complexity Low_complexity 1 25 0 1670 77 104 23 chr20 54684325 54684584 -11983421 + AluSx SINE Alu 1 280 -32 51 0 0 0 chr20 54684590 54684641 -11983364 + AT_rich Low_complexity Low_complexity 1 51 0 264 259 238 16 chr20 54685381 54685570 -11982435 + MIR SINE MIR 21 251 -11 567 274 58 73 chr20 54686713 54687126 -11980879 + L1ME4a LINE L1 5518 5924 -197 544 258 80 107 chr20 54687142 54687415 -11980590 + L1MC5 LINE L1 7570 7832 -129 2432 78 0 0 chr20 54687415 54687724 -11980281 + AluY SINE Alu 3 311 0 544 258 80 107 chr20 54687724 54687815 -11980190 + L1MC5 LINE L1 7832 7924 -37 23 0 0 0 chr20 54687857 54687880 -11980125 + AT_rich Low_complexity Low_complexity 1 23 0 198 0 0 0 chr20 54688230 54688252 -11979753 + (CA)n Simple_repeat Simple_repeat 2 23 0 279 214 0 0 chr20 54688520 54688590 -11979415 + T-rich Low_complexity Low_complexity 5 74 0 623 93 0 35 chr20 54688731 54688817 -11979188 + AluJo/FLAM SINE Alu 36 118 -194 2014 136 0 0 chr20 54688817 54689118 -11978887 - AluSx SINE Alu 0 312 12 2150 71 24 14 chr20 54689504 54689801 -11978204 + AluSx SINE Alu 1 300 -12 237 183 0 0 chr20 54690904 54690964 -11977041 + A-rich Low_complexity Low_complexity 1 60 0 2250 103 0 0 chr20 54691239 54691540 -11976465 - AluSg1 SINE Alu -8 301 1 2072 102 3 13 chr20 54691580 54691894 -11976111 - AluY SINE Alu 0 311 1 2133 117 0 10 chr20 54691894 54692203 -11975802 - AluSx SINE Alu -6 306 1 859 201 0 0 chr20 54692258 54692422 -11975583 + FRAM SINE Alu 1 161 -15 948 160 0 6 chr20 54692547 54692703 -11975302 + FRAM SINE Alu 1 146 -30 395 155 0 64 chr20 54692736 54692830 -11975175 - AluJ/FRAM SINE Alu 0 302 228 254 161 0 129 chr20 54692811 54692857 -11975148 - AluY SINE Alu -130 171 133 * 2055 112 10 0 chr20 54692857 54693152 -11974853 - AluSx SINE Alu -14 298 1 254 161 0 129 chr20 54693152 54693167 -11974838 - AluY SINE Alu -168 133 118 1949 125 3 14 chr20 54693191 54693486 -11974519 + AluSq SINE Alu 1 292 -21 2192 84 0 7 chr20 54693647 54693945 -11974060 - AluY SINE Alu -15 296 1 2063 113 7 0 chr20 54694145 54694454 -11973551 + AluY SINE Alu 1 311 0 2255 112 0 3 chr20 54695045 54695359 -11972646 - AluSq SINE Alu 0 313 1 1761 124 0 50 chr20 54695488 54695811 -11972194 + AluSx SINE Alu 1 308 0 2109 85 3 0 chr20 54695811 54696116 -11971889 + AluY SINE Alu 1 306 0 2500 52 0 0 chr20 54696795 54697102 -11970903 - AluY SINE Alu -4 307 1 2242 96 0 13 chr20 54697148 54697461 -11970544 - AluSg SINE Alu -1 309 1 26 0 0 0 chr20 54697461 54697487 -11970518 + AT_rich Low_complexity Low_complexity 1 26 0 1621 124 20 4 chr20 54697487 54697736 -11970269 - AluSq SINE Alu -60 253 1 2160 100 3 3 chr20 54697740 54698040 -11969965 - AluSx SINE Alu -12 300 1 351 294 71 56 chr20 54699172 54699369 -11968636 - MIR SINE MIR -40 222 23 21 0 0 0 chr20 54699843 54699864 -11968141 + AT_rich Low_complexity Low_complexity 1 21 0 826 219 82 6 chr20 54700451 54700667 -11967338 - MIR SINE MIR 0 262 33 2255 84 0 40 chr20 54701142 54701289 -11966716 - AluSq SINE Alu -5 308 157 2124 93 7 3 chr20 54701289 54701591 -11966414 + AluSg SINE Alu 1 303 -7 2255 84 0 40 chr20 54701591 54701764 -11966241 - AluSq SINE Alu -156 157 1 22 0 0 0 chr20 54702194 54702216 -11965789 + AT_rich Low_complexity Low_complexity 1 22 0 2183 102 0 0 chr20 54702219 54702513 -11965492 - AluSg SINE Alu -16 294 1 1586 162 3 30 chr20 54702900 54703219 -11964786 + AluJo SINE Alu 1 312 0 755 178 0 0 chr20 54703425 54703543 -11964462 + AluJo/FLAM SINE Alu 1 118 -184 989 102 36 30 chr20 54703543 54703709 -11964296 - BC200 scRNA scRNA -33 167 1 1989 104 32 19 chr20 54703773 54704081 -11963924 + AluSq SINE Alu 1 312 -1 2120 62 3 34 chr20 54704171 54704487 -11963518 + AluY SINE Alu 1 307 0 865 201 14 104 chr20 54704505 54704793 -11963212 - ORSL DNA AcHobo -4 271 10 203 349 0 12 chr20 54704838 54704921 -11963084 - L2 LINE L2 -213 3059 2978 1772 146 29 0 chr20 54704930 54705211 -11962794 + AluSx SINE Alu 1 289 -23 32 0 0 0 chr20 54705212 54705244 -11962761 + AT_rich Low_complexity Low_complexity 1 32 0 2262 82 7 7 chr20 54705291 54705595 -11962410 - AluSx SINE Alu -8 304 1 316 310 85 40 chr20 54705596 54705796 -11962209 - L2 LINE L2 -340 2974 2766 2398 71 3 0 chr20 54705884 54706192 -11961813 - AluSp SINE Alu -4 309 1 964 206 0 0 chr20 54706202 54706386 -11961619 - AluJb SINE Alu -8 304 121 822 196 0 26 chr20 54706745 54706898 -11961107 + MER2 DNA MER2_type 1 149 -196 2376 73 3 0 chr20 54706904 54707205 -11960800 - AluSg SINE Alu -8 302 1 2267 101 0 0 chr20 54707207 54707513 -11960492 - AluSg SINE Alu -2 308 3 2437 48 0 0 chr20 54707538 54707827 -11960178 - AluY SINE Alu -22 289 1 801 229 0 0 chr20 54707856 54708000 -11960005 + FRAM SINE Alu 1 144 -32 1935 95 37 4 chr20 54708000 54708315 -11959690 - AluSx SINE Alu 0 324 1 620 177 0 40 chr20 54708348 54708472 -11959533 + FLAM_C SINE Alu 4 122 -21 279 231 0 0 chr20 54708500 54708552 -11959453 + AluSc SINE Alu 233 284 -15 316 242 86 96 chr20 54708820 54709018 -11958987 - L2 LINE L2 -3 3310 3115 1148 163 0 140 chr20 54709019 54709181 -11958824 + AluJo SINE Alu 1 184 -128 2204 109 0 0 chr20 54709181 54709494 -11958511 + AluSp SINE Alu 1 313 0 1148 163 0 140 chr20 54709494 54709505 -11958500 + AluJo SINE Alu 184 195 -117 2099 101 7 3 chr20 54709505 54709801 -11958204 + AluSx SINE Alu 1 297 -15 1148 163 0 140 chr20 54709801 54709933 -11958072 + AluJo SINE Alu 195 264 -48 180 0 0 0 chr20 54709933 54709953 -11958052 + (GA)n Simple_repeat Simple_repeat 1 20 0 2580 33 0 0 chr20 54709963 54710263 -11957742 + AluY SINE Alu 1 300 -11 404 213 38 0 chr20 54710267 54710347 -11957658 - MER3 DNA MER1_type -126 83 1 387 41 0 0 chr20 54710378 54710427 -11957578 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 2069 117 0 0 chr20 54710427 54710725 -11957280 - AluSx SINE Alu -14 298 1 634 164 0 0 chr20 54710728 54710832 -11957173 - FLAM_C SINE Alu -7 136 33 633 250 28 11 chr20 54710833 54711009 -11956996 - L1MC5 LINE L1 -480 7481 7303 300 333 76 44 chr20 54711196 54711322 -11956683 - MIR SINE MIR 0 262 124 1997 106 3 3 chr20 54711322 54711645 -11956360 - AluSx SINE Alu 0 323 1 300 333 76 44 chr20 54711645 54711742 -11956263 - MIR SINE MIR -138 124 31 218 255 0 94 chr20 54711740 54711846 -11956159 - MER5A DNA MER1_type -78 111 16 * 372 228 74 104 chr20 54712135 54712337 -11955668 - L2 LINE L2 -3 3310 3115 1275 165 0 96 chr20 54712338 54712466 -11955539 + AluJo SINE Alu 1 85 -227 2097 109 3 0 chr20 54712466 54712759 -11955246 - AluSq SINE Alu -19 294 1 1275 165 0 96 chr20 54712759 54712933 -11955072 + AluJo SINE Alu 85 274 -38 702 78 26 9 chr20 54712939 54713054 -11954951 + (GGAA)n Simple_repeat Simple_repeat 4 120 0 525 220 13 6 chr20 54713065 54713130 -11954875 + GA-rich Low_complexity Low_complexity 3 66 -96 1663 199 0 6 chr20 54713130 54713441 -11954564 + AluJo SINE Alu 1 309 -3 525 220 13 6 chr20 54713441 54713534 -11954471 + GA-rich Low_complexity Low_complexity 66 162 0 294 29 0 0 chr20 54713535 54713570 -11954435 + (GGAAA)n Simple_repeat Simple_repeat 1 35 0 1406 188 29 48 chr20 54713648 54713821 -11954184 + MER58B DNA MER1_type 3 169 -2251 2197 101 7 0 chr20 54713821 54714128 -11953877 - AluSx SINE Alu -1 311 3 1406 188 29 48 chr20 54714128 54714268 -11953737 + MER58B DNA MER1_type 169 310 -31 1970 117 0 3 chr20 54714268 54714580 -11953425 - AluSq SINE Alu 0 311 1 1776 261 137 38 chr20 54714619 54714860 -11953145 - L2 LINE L2 -280 3033 2817 423 0 0 0 chr20 54714860 54714907 -11953098 + (TG)n Simple_repeat Simple_repeat 1 47 0 1622 187 0 0 chr20 54714914 54715192 -11952813 - AluJo SINE Alu -30 282 5 1776 261 137 38 chr20 54715192 54715272 -11952733 - L2 LINE L2 -501 2812 2741 1957 127 28 0 chr20 54715272 54715563 -11952442 + AluSx SINE Alu 1 299 -13 1776 261 137 38 chr20 54715563 54716056 -11951949 - L2 LINE L2 -572 2741 2147 521 301 175 46 chr20 54716049 54716573 -11951432 + L2 LINE L2 2702 3313 0 * 2150 86 0 0 chr20 54717017 54717297 -11950708 - AluY SINE Alu -31 280 1 1930 138 0 3 chr20 54717297 54717594 -11950411 - AluSx SINE Alu -16 296 1 2082 106 7 7 chr20 54717703 54717995 -11950010 + AluSg SINE Alu 1 292 -18 1636 146 9 41 chr20 54718052 54718368 -11949637 + L1MC2 LINE L1 6023 6328 -16 2052 124 0 7 chr20 54718369 54718675 -11949330 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr20 54718680 54718701 -11949304 + AT_rich Low_complexity Low_complexity 1 21 0 1924 112 65 0 chr20 54718922 54719200 -11948805 - AluSg SINE Alu -11 299 4 1970 134 3 0 chr20 54720172 54720470 -11947535 - AluSq SINE Alu -14 299 1 21 36 0 0 chr20 54720649 54720677 -11947328 + AT_rich Low_complexity Low_complexity 1 28 0 1706 100 4 4 chr20 54720760 54720999 -11947006 + AluSp SINE Alu 1 239 -74 862 187 12 0 chr20 54721004 54721170 -11946835 + AluJb SINE Alu 144 311 -1 203 133 0 0 chr20 54721392 54721422 -11946583 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 251 54 27 0 chr20 54721422 54721459 -11946546 + (TTTC)n Simple_repeat Simple_repeat 1 38 0 1007 142 0 0 chr20 54721484 54721646 -11946359 + AluSg/x SINE Alu 135 296 -14 183 80 0 0 chr20 54721654 54721679 -11946326 + (TAA)n Simple_repeat Simple_repeat 2 26 0 1877 114 46 4 chr20 54721705 54721986 -11946019 + AluSx SINE Alu 1 293 -19 594 249 110 0 chr20 54722045 54722218 -11945787 + MER58A DNA MER1_type 32 223 -1 2028 119 0 6 chr20 54722796 54723108 -11944897 + AluSx SINE Alu 1 310 -2 899 111 11 106 chr20 54723256 54723436 -11944569 - FRAM SINE Alu -13 163 1 471 196 59 0 chr20 54723504 54723606 -11944399 + FLAM_C SINE Alu 4 111 -32 276 30 0 0 chr20 54723607 54723640 -11944365 + (TC)n Simple_repeat Simple_repeat 2 34 0 1953 122 34 3 chr20 54723640 54723934 -11944071 - AluSx SINE Alu -9 303 1 24 32 0 0 chr20 54723938 54723969 -11944036 + AT_rich Low_complexity Low_complexity 1 31 0 1438 181 4 8 chr20 54724092 54724358 -11943647 - AluJo SINE Alu -43 269 5 265 221 67 87 chr20 54724398 54724502 -11943503 - L2 LINE L2 -94 3219 3118 1487 133 38 110 chr20 54724620 54724937 -11943068 - AluJo SINE Alu -8 294 1 2303 81 3 0 chr20 54724955 54725253 -11942752 + AluSp SINE Alu 1 299 -14 1096 127 0 0 chr20 54725253 54725411 -11942594 + AluSg/x SINE Alu 134 291 -21 2041 136 0 0 chr20 54725416 54725718 -11942287 + AluSx SINE Alu 1 302 -10 2037 124 0 7 chr20 54725726 54726033 -11941972 + AluSg SINE Alu 1 305 -5 280 159 14 14 chr20 54726033 54726093 -11941912 + MER96B DNA MER1_type? 124 186 -231 186 211 18 70 chr20 54726125 54726182 -11941823 + MIR SINE MIR 110 163 -99 2141 91 3 7 chr20 54726182 54726478 -11941527 - AluSx SINE Alu -17 295 1 2153 113 0 0 chr20 54726491 54726801 -11941204 - AluY SINE Alu -1 310 1 356 219 10 122 chr20 54726984 54727043 -11940962 - MER104 DNA Tc2 -1721 177 113 737 188 0 30 chr20 54727043 54727176 -11940829 - FLAM_C SINE Alu -2 131 3 356 219 10 122 chr20 54727176 54727312 -11940693 - MER104 DNA Tc2 -1785 113 4 1957 103 27 3 chr20 54727321 54727613 -11940392 + AluSx SINE Alu 1 299 -13 710 115 66 8 chr20 54727625 54727747 -11940258 + L1PB2 LINE L1 6020 6148 -3 2092 102 0 3 chr20 54727770 54728065 -11939940 + AluSp SINE Alu 1 294 -19 2358 74 0 0 chr20 54728141 54728438 -11939567 + AluSc SINE Alu 1 297 -12 207 0 0 0 chr20 54728769 54728792 -11939213 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 212 0 36 0 chr20 54730233 54730261 -11937744 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1926 122 11 0 chr20 54730265 54730552 -11937453 - AluSx SINE Alu -22 290 1 2185 96 0 13 chr20 54730790 54731091 -11936914 + AluSg SINE Alu 1 297 -13 2035 96 15 0 chr20 54731336 54731608 -11936397 + AluSx SINE Alu 11 286 -26 183 162 0 0 chr20 54731929 54731966 -11936039 + CT-rich Low_complexity Low_complexity 2 38 0 203 357 45 18 chr20 54732656 54732768 -11935237 - MIR3 SINE MIR -6 202 88 236 261 46 0 chr20 54732808 54732873 -11935132 + MIR3 SINE MIR 102 169 -39 302 302 16 62 chr20 54734119 54734248 -11933757 + L1MDa LINE L1 2421 2543 -3997 475 313 159 6 chr20 54735157 54735339 -11932666 + MIR SINE MIR 53 262 0 399 239 60 103 chr20 54735655 54735673 -11932332 - L1M4 LINE L1 -2803 3343 3326 1737 119 47 22 chr20 54735673 54735951 -11932054 - AluSx SINE Alu -27 285 1 399 239 60 103 chr20 54735951 54736081 -11931924 - L1M4 LINE L1 -2820 3326 3206 2100 62 38 14 chr20 54736081 54736372 -11931633 - AluY SINE Alu -13 298 1 399 239 60 103 chr20 54736372 54736456 -11931549 - L1M4 LINE L1 -2940 3206 3120 204 40 0 0 chr20 54736632 54736657 -11931348 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 2361 76 3 6 chr20 54738724 54739038 -11928967 - AluSp SINE Alu 0 313 1 883 148 0 7 chr20 54739204 54739346 -11928659 - FLAM_C SINE Alu -2 141 1 269 253 222 10 chr20 54739352 54739451 -11928554 + L2 LINE L2 3180 3299 -14 2023 118 0 3 chr20 54739548 54739837 -11928168 + AluSx SINE Alu 1 288 -24 1753 122 7 51 chr20 54740001 54740321 -11927684 - AluSx SINE Alu 0 307 1 2207 78 3 20 chr20 54740392 54740698 -11927307 + AluSc SINE Alu 1 301 -8 283 350 10 10 chr20 54740867 54740970 -11927035 + L2 LINE L2 3192 3294 -19 2155 86 0 38 chr20 54741469 54741782 -11926223 - AluSc SINE Alu -8 301 1 1520 166 23 10 chr20 54741783 54742091 -11925914 - AluJo SINE Alu 0 312 1 603 273 77 39 chr20 54742091 54742171 -11925834 - MLT1H LTR MaLR -1 548 473 2711 19 0 0 chr20 54742171 54742482 -11925523 - AluYa5 SINE Alu 0 311 1 1616 192 14 0 chr20 54742488 54742775 -11925230 - AluJb SINE Alu -20 292 2 603 273 77 39 chr20 54742775 54742947 -11925058 - MLT1H LTR MaLR -80 469 279 1347 164 33 22 chr20 54742955 54743230 -11924775 - AluJb SINE Alu -29 283 6 2236 88 0 3 chr20 54743405 54743701 -11924304 - AluSp SINE Alu -17 296 2 180 320 0 0 chr20 54743825 54743875 -11924130 + MIR SINE MIR 85 134 -128 1743 99 20 131 chr20 54744064 54744407 -11923598 + AluYb8 SINE Alu 1 305 -3 1711 99 4 28 chr20 54744522 54744816 -11923189 - AluSx SINE Alu 0 326 39 2087 117 0 0 chr20 54744990 54745281 -11922724 + AluSx SINE Alu 9 299 -13 222 116 0 0 chr20 54745290 54745333 -11922672 + (T)n Simple_repeat Simple_repeat 1 43 0 438 83 17 0 chr20 54745345 54745405 -11922600 - U7 snRNA snRNA -1 62 2 2306 92 0 0 chr20 54745470 54745775 -11922230 - AluSx SINE Alu -7 305 1 459 193 64 0 chr20 54746039 54746148 -11921857 + LTR9B LTR ERV1 445 560 -84 238 342 12 0 chr20 54746171 54746272 -11921733 + MIR SINE MIR 15 117 -91 851 196 0 0 chr20 54746277 54746445 -11921560 - AluSg/x SINE Alu -8 302 135 2177 92 23 0 chr20 54746445 54746748 -11921257 - AluSp SINE Alu -3 310 1 1601 186 4 0 chr20 54746785 54747090 -11920915 + AluJo SINE Alu 1 306 0 747 194 0 16 chr20 54747097 54747226 -11920779 + FLAM_A SINE Alu 1 127 -6 2256 101 7 0 chr20 54747302 54747608 -11920397 + AluSg SINE Alu 1 308 -2 2234 75 17 0 chr20 54747665 54747958 -11920047 + AluSp SINE Alu 1 298 -15 1358 193 65 31 chr20 54747971 54748324 -11919681 + MLT1A1 LTR MaLR 1 365 0 2203 119 0 0 chr20 54748463 54748773 -11919232 - AluSx SINE Alu -2 310 1 2218 52 42 3 chr20 54748917 54749206 -11918799 - AluY SINE Alu -11 300 1 180 0 0 0 chr20 54749228 54749248 -11918757 + (A)n Simple_repeat Simple_repeat 1 20 0 495 257 79 0 chr20 54749306 54749458 -11918547 - MER103 DNA DNA 0 166 3 2063 134 0 0 chr20 54749645 54749950 -11918055 - AluSx SINE Alu -5 307 3 23 54 0 0 chr20 54750048 54750085 -11917920 + AT_rich Low_complexity Low_complexity 1 37 0 642 186 0 26 chr20 54750085 54750198 -11917807 - FLAM_C SINE Alu -25 118 9 225 302 73 31 chr20 54750286 54750382 -11917623 - HAL1b LINE L1 -43 1305 1206 2175 102 0 0 chr20 54750442 54750737 -11917268 - AluSg SINE Alu -15 295 1 1845 110 72 3 chr20 54750826 54751118 -11916887 - AluSq SINE Alu -1 312 1 1967 137 3 0 chr20 54751118 54751425 -11916580 - AluSx SINE Alu -4 308 1 2302 53 0 0 chr20 54751536 54751840 -11916165 + AluY SINE Alu 1 304 0 1649 153 0 39 chr20 54751865 54752173 -11915832 - AluSx SINE Alu -16 296 1 287 254 55 27 chr20 54752173 54752283 -11915722 - L1ME LINE L1 -462 5659 5547 2193 93 0 7 chr20 54752327 54752628 -11915377 - AluSg SINE Alu -9 301 3 1773 167 3 0 chr20 54752635 54752929 -11915076 - AluJb SINE Alu -17 295 1 2142 113 0 3 chr20 54752941 54753252 -11914753 - AluSx SINE Alu -2 310 1 183 159 0 175 chr20 54753731 54753778 -11914227 + L2 LINE L2 3262 3297 -16 1792 152 0 35 chr20 54753778 54754093 -11913912 + AluSx SINE Alu 1 304 -8 183 159 0 175 chr20 54754093 54754108 -11913897 + L2 LINE L2 3297 3313 0 596 274 102 35 chr20 54754260 54754574 -11913431 + MER102b DNA MER1_type 2 336 -5 22 0 0 0 chr20 54755693 54755715 -11912290 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr20 54755957 54755983 -11912022 + AT_rich Low_complexity Low_complexity 1 26 0 2013 110 10 0 chr20 54757021 54757312 -11910693 - AluSx SINE Alu -18 294 1 2134 100 0 16 chr20 54757759 54758070 -11909935 + AluSx SINE Alu 6 311 -1 359 309 24 67 chr20 54758168 54758264 -11909741 + MIR SINE MIR 70 158 -104 2178 102 3 0 chr20 54758264 54758567 -11909438 + AluSp SINE Alu 1 304 -9 359 309 24 67 chr20 54758567 54758635 -11909370 + MIR SINE MIR 158 227 -35 823 177 0 0 chr20 54758664 54758805 -11909200 + FLAM_C SINE Alu 1 141 -2 403 167 219 10 chr20 54758891 54758987 -11909018 - AluJo/FRAM SINE Alu -63 249 134 2013 147 0 0 chr20 54758987 54759286 -11908719 - AluSx SINE Alu -13 299 1 535 178 0 11 chr20 54759317 54759407 -11908598 + AluJo SINE Alu 86 174 -138 1851 124 0 79 chr20 54759585 54759723 -11908282 + AluSx SINE Alu 1 148 -164 2219 118 0 0 chr20 54759723 54760029 -11907976 + AluSg SINE Alu 3 308 -2 1851 124 0 79 chr20 54760029 54760220 -11907785 + AluSx SINE Alu 148 304 -8 565 304 78 11 chr20 54760235 54760426 -11907579 - MIR SINE MIR -18 244 41 2352 61 0 0 chr20 54760609 54760905 -11907100 - AluY SINE Alu -15 296 1 189 107 0 0 chr20 54760914 54760942 -11907063 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 1881 97 64 0 chr20 54761001 54761293 -11906712 + AluSx SINE Alu 1 309 0 1665 156 10 7 chr20 54761296 54761591 -11906414 - AluJb SINE Alu -16 296 1 267 221 0 59 chr20 54761937 54762005 -11906000 + MER45A DNA AcHobo 1 64 -114 424 226 0 0 chr20 54762005 54762089 -11905916 - AluJ/FLAM SINE Alu -227 85 2 507 158 0 12 chr20 54762093 54762175 -11905830 + MER45A DNA AcHobo 97 177 -1 436 190 0 0 chr20 54762250 54762329 -11905676 - MIR SINE MIR -60 202 124 183 26 26 53 chr20 54762465 54762503 -11905502 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 2037 109 3 29 chr20 54762976 54763289 -11904716 + AluSc SINE Alu 1 305 -4 2043 91 18 11 chr20 54763303 54763588 -11904417 + AluSq SINE Alu 3 289 -24 216 0 0 0 chr20 54763591 54763615 -11904390 + (TAA)n Simple_repeat Simple_repeat 3 26 0 2147 104 10 7 chr20 54763616 54763924 -11904081 + AluSx SINE Alu 1 309 -3 261 163 0 0 chr20 54764268 54764317 -11903688 + CT-rich Low_complexity Low_complexity 1 49 0 539 252 92 19 chr20 54764650 54764695 -11903310 - MIR SINE MIR -10 252 212 817 145 7 43 chr20 54764695 54764833 -11903172 - FLAM_C SINE Alu 0 133 1 539 252 92 19 chr20 54764833 54764993 -11903012 - MIR SINE MIR -50 212 32 1438 173 36 65 chr20 54765014 54765129 -11902876 + AluJo SINE Alu 5 122 -180 2572 29 0 10 chr20 54765129 54765437 -11902568 + AluY SINE Alu 1 305 -6 1438 173 36 65 chr20 54765437 54765627 -11902378 + AluJo SINE Alu 122 301 -1 2096 119 0 13 chr20 54765841 54766152 -11901853 - AluSg SINE Alu -2 308 2 1916 109 49 11 chr20 54766154 54766304 -11901701 - AluSp SINE Alu -16 297 154 2332 83 0 0 chr20 54766304 54766604 -11901401 - AluSc SINE Alu -9 300 1 1916 109 49 11 chr20 54766604 54766738 -11901267 - AluSp SINE Alu -159 154 2 2047 139 0 0 chr20 54766738 54767041 -11900964 - AluSx SINE Alu -9 303 1 647 301 34 6 chr20 54767059 54767235 -11900770 + MIR SINE MIR 30 210 -52 1985 112 10 7 chr20 54767394 54767688 -11900317 + AluY SINE Alu 5 299 -12 1388 152 188 12 chr20 54767855 54768111 -11899894 + AluJo SINE Alu 2 302 0 346 345 40 43 chr20 54768155 54768433 -11899572 - L2 LINE L2 -643 2671 2395 2205 89 7 3 chr20 54768842 54769144 -11898861 + AluSx SINE Alu 1 303 -9 252 286 0 13 chr20 54769329 54769406 -11898599 + L2 LINE L2 3234 3309 -4 1208 147 5 0 chr20 54769682 54769880 -11898125 + L1PB1 LINE L1 5953 6151 0 2018 180 62 22 chr20 54769910 54770217 -11897788 - L1MB7 LINE L1 -4 6180 5848 2111 106 7 3 chr20 54770217 54770519 -11897486 - AluSq SINE Alu -10 303 1 2018 180 62 22 chr20 54770519 54770660 -11897345 - L1MB7 LINE L1 -336 5848 5714 216 0 0 0 chr20 54770660 54770684 -11897321 + (TA)n Simple_repeat Simple_repeat 2 25 0 2042 104 40 3 chr20 54770684 54770983 -11897022 - AluSg SINE Alu 0 310 1 1828 129 7 0 chr20 54770986 54771304 -11896701 - AluSx SINE Alu 0 321 2 744 208 51 37 chr20 54771307 54771523 -11896482 - MER113 DNA MER1_type? -168 353 135 2411 52 0 16 chr20 54771588 54771898 -11896107 + AluY SINE Alu 1 305 -6 1706 164 0 14 chr20 54771973 54772266 -11895739 + AluSx SINE Alu 20 308 -4 180 0 0 0 chr20 54772327 54772347 -11895658 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 763 153 0 44 chr20 54772426 54772563 -11895442 - FLAM_C SINE Alu 0 133 3 450 236 221 8 chr20 54772563 54772690 -11895315 - MIR SINE MIR -33 229 76 2443 59 0 0 chr20 54773230 54773536 -11894469 - AluY SINE Alu -1 310 5 1969 133 0 7 chr20 54773657 54773959 -11894046 + AluJo SINE Alu 1 300 -12 2312 83 3 3 chr20 54773962 54774274 -11893731 + AluSp SINE Alu 1 312 -1 323 191 55 9 chr20 54774300 54774410 -11893595 + GA-rich Low_complexity Low_complexity 5 119 0 2157 92 7 7 chr20 54774412 54774717 -11893288 + AluSg SINE Alu 1 305 -5 2114 112 0 0 chr20 54774945 54775240 -11892765 - AluSg SINE Alu -14 296 2 519 235 23 53 chr20 54775267 54775399 -11892606 + MIR SINE MIR 15 142 -120 185 0 40 0 chr20 54775498 54775523 -11892482 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 1621 64 0 5 chr20 54775523 54775725 -11892280 - AluSq SINE Alu -32 281 81 1014 197 178 19 chr20 54775729 54775871 -11892134 - AluJo SINE Alu 0 302 184 186 43 0 0 chr20 54775871 54775894 -11892111 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1014 197 178 19 chr20 54775894 54776010 -11891995 - AluJo SINE Alu -118 184 3 660 211 0 0 chr20 54776068 54776182 -11891823 - MER81 DNA DNA 0 114 1 324 271 121 43 chr20 54776270 54776410 -11891595 + MER5A DNA MER1_type 36 186 -3 180 281 35 0 chr20 54776547 54776604 -11891401 + MIR SINE MIR 92 150 -112 2027 140 0 0 chr20 54776923 54777223 -11890782 - AluSx SINE Alu -12 300 1 2350 79 0 0 chr20 54777252 54777555 -11890450 - AluY SINE Alu -8 303 1 1391 192 44 85 chr20 54777570 54777980 -11890025 - L1MD2 LINE L1 -8 6234 5891 1584 156 23 23 chr20 54777980 54778288 -11889717 - AluJo SINE Alu -4 308 1 1391 192 44 85 chr20 54778288 54778381 -11889624 - L1MD2 LINE L1 -351 5891 5796 2161 82 7 7 chr20 54778537 54778840 -11889165 + AluSq SINE Alu 1 303 -10 2112 42 3 24 chr20 54778840 54779127 -11888878 + AluY SINE Alu 1 281 -30 1401 43 0 21 chr20 54778941 54779127 -11888878 + AluY SINE Alu 100 309 0 253 0 0 0 chr20 54779127 54779155 -11888850 + (CAAAA)n Simple_repeat Simple_repeat 3 170 0 1772 141 11 0 chr20 54779305 54779581 -11888424 + AluSx SINE Alu 1 279 -33 742 237 6 17 chr20 54779584 54779604 -11888401 - AluJb SINE Alu -1 311 137 720 236 6 6 chr20 54779604 54779761 -11888244 - FRAM SINE Alu -9 157 1 387 0 0 0 chr20 54779761 54779804 -11888201 + (TTA)n Simple_repeat Simple_repeat 2 44 0 2060 106 0 3 chr20 54779804 54780087 -11887918 - AluSx SINE Alu -30 282 1 1937 89 0 28 chr20 54780146 54780448 -11887557 - AluSx SINE Alu 0 312 15 2028 120 0 0 chr20 54780455 54780746 -11887259 - AluSx SINE Alu -19 293 3 215 61 30 0 chr20 54780752 54780785 -11887220 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 759 192 0 0 chr20 54780785 54780905 -11887100 - FLAM_C SINE Alu -22 121 2 1097 201 6 34 chr20 54780908 54780928 -11887077 - L1MB5 LINE L1 -348 5826 5807 2335 66 3 0 chr20 54780928 54781233 -11886772 - AluY SINE Alu -5 306 1 1097 201 6 34 chr20 54781233 54781260 -11886745 - L1MB5 LINE L1 -367 5807 5781 2223 88 0 0 chr20 54781260 54781565 -11886440 + AluSc SINE Alu 1 305 -4 1097 201 6 34 chr20 54781565 54781805 -11886200 - L1MB5 LINE L1 -393 5781 5567 2251 85 0 16 chr20 54782040 54782357 -11885648 - AluSp SINE Alu -1 312 1 2179 112 0 0 chr20 54782362 54782665 -11885340 - AluSx SINE Alu -9 303 1 459 287 80 13 chr20 54783619 54783769 -11884236 + MER63A DNA MER1_type 27 186 -24 663 212 4 0 chr20 54784066 54784322 -11883683 + (CA)n Simple_repeat Simple_repeat 1 257 0 342 301 62 34 chr20 54785099 54785245 -11882760 + MIR SINE MIR 102 251 -11 2461 165 2 89 chr20 54785304 54785357 -11882648 - L1MB3 LINE L1 -2 6181 6125 297 0 0 0 chr20 54785357 54785390 -11882615 + (TCCCC)n Simple_repeat Simple_repeat 5 37 0 1656 166 6 42 chr20 54785393 54785706 -11882299 - AluJo SINE Alu -10 302 1 2461 165 2 89 chr20 54785706 54785846 -11882159 - L1MB3 LINE L1 -60 6123 5972 2107 99 0 0 chr20 54785846 54786155 -11881850 + AluSg SINE Alu 1 309 0 2461 165 2 89 chr20 54786155 54786353 -11881652 - L1MB3 LINE L1 -211 5972 5844 1625 146 23 33 chr20 54786353 54786655 -11881350 - AluJb SINE Alu -13 299 1 2461 165 2 89 chr20 54786655 54786824 -11881181 - L1MB3 LINE L1 -339 5844 5662 2376 67 0 0 chr20 54786856 54787153 -11880852 - AluY SINE Alu -14 297 1 1457 123 4 78 chr20 54787220 54787303 -11880702 + AluJo SINE Alu 57 145 -167 2205 109 0 0 chr20 54787303 54787607 -11880398 + AluSx SINE Alu 1 304 -8 1457 123 4 78 chr20 54787607 54787792 -11880213 + AluJo SINE Alu 145 305 -7 226 327 65 0 chr20 54787812 54787919 -11880086 + L2 LINE L2 3031 3144 -169 872 175 23 47 chr20 54787943 54788114 -11879891 + AluJo SINE Alu 105 271 -41 467 222 76 35 chr20 54788122 54788266 -11879739 + L2 LINE L2 3161 3310 -3 530 135 0 10 chr20 54788770 54788866 -11879139 + (TCCC)n Simple_repeat Simple_repeat 4 98 0 331 312 0 0 chr20 54789145 54789222 -11878783 + MIR3 SINE MIR 81 157 -51 459 78 16 0 chr20 54789472 54789536 -11878469 + AluSq/x SINE Alu 87 151 -161 532 221 104 18 chr20 54789540 54789703 -11878302 + MER20 DNA MER1_type 43 219 0 965 105 0 0 chr20 54789813 54789956 -11878049 - AluSp/q SINE Alu -2 311 169 223 253 101 20 chr20 54790098 54790197 -11877808 - L2 LINE L2 0 3272 3166 1606 117 67 24 chr20 54790742 54791040 -11876965 - AluSx SINE Alu -1 311 1 1100 232 17 17 chr20 54791315 54791556 -11876449 + MIR SINE MIR 19 259 -3 2227 90 3 3 chr20 54791607 54791908 -11876097 + AluSx SINE Alu 1 301 -11 636 269 19 0 chr20 54792209 54792365 -11875640 + MER45A DNA AcHobo 1 159 -19 2296 86 0 3 chr20 54792407 54792710 -11875295 - AluSg SINE Alu -8 302 1 24 32 0 0 chr20 54792710 54792741 -11875264 + AT_rich Low_complexity Low_complexity 1 31 0 1957 141 0 3 chr20 54792758 54793063 -11874942 + AluSx SINE Alu 2 305 -7 1009 240 63 0 chr20 54793132 54793403 -11874602 + L1MD3 LINE L1 7694 7981 -14 26 74 0 0 chr20 54793465 54793519 -11874486 + AT_rich Low_complexity Low_complexity 1 54 0 2050 104 21 0 chr20 54793537 54793826 -11874179 - AluY SINE Alu -16 295 1 585 100 0 0 chr20 54793837 54793927 -11874078 + (TA)n Simple_repeat Simple_repeat 1 90 0 2034 114 6 22 chr20 54794143 54794458 -11873547 - AluSg SINE Alu 0 310 1 494 278 63 26 chr20 54794504 54794695 -11873310 - L1MC4a LINE L1 -1980 5828 5631 1805 161 3 0 chr20 54795339 54795631 -11872374 - AluJb SINE Alu -19 293 1 24 0 0 0 chr20 54795733 54795757 -11872248 + AT_rich Low_complexity Low_complexity 1 24 0 741 190 76 19 chr20 54795795 54795953 -11872052 + MLT1A2 LTR MaLR 1 167 -207 2048 114 3 0 chr20 54795953 54796243 -11871762 + AluSp SINE Alu 1 291 -22 2228 90 7 0 chr20 54796526 54796827 -11871178 + AluSp SINE Alu 1 303 -10 2103 107 21 0 chr20 54796837 54797126 -11870879 + AluSc SINE Alu 1 295 -14 2269 92 3 0 chr20 54797281 54797585 -11870420 - AluSp SINE Alu -8 305 1 805 146 83 154 chr20 54797954 54798049 -11869956 - MER58A DNA MER1_type -2197 223 123 1876 140 17 0 chr20 54798049 54798341 -11869664 - AluSx SINE Alu -11 301 5 805 146 83 154 chr20 54798341 54798485 -11869520 - MER58A DNA MER1_type -2297 123 1 2048 124 13 0 chr20 54798523 54798822 -11869183 + AluSx SINE Alu 1 303 -9 1979 115 0 29 chr20 54799054 54799367 -11868638 - AluSx SINE Alu -8 304 1 288 248 113 57 chr20 54799382 54799642 -11868363 + MLT1L LTR MaLR 219 598 -14 463 272 99 35 chr20 54799775 54799813 -11868192 + MIR SINE MIR 48 82 -180 1573 186 0 7 chr20 54799813 54800138 -11867867 - AluJb SINE Alu 0 327 5 463 272 99 35 chr20 54800138 54800300 -11867705 + MIR SINE MIR 82 262 0 1539 178 17 3 chr20 54800775 54801062 -11866943 - AluSx SINE Alu -21 291 1 1640 132 87 7 chr20 54801097 54801386 -11866619 - AluSq SINE Alu -1 312 1 2123 80 30 10 chr20 54801389 54801717 -11866288 - AluSx SINE Alu 0 312 1 972 294 61 17 chr20 54801747 54802107 -11865898 + LTR33 LTR ERVL 44 419 -102 2275 71 3 0 chr20 54802114 54802409 -11865596 - AluSp SINE Alu -17 296 1 238 200 0 0 chr20 54802417 54802462 -11865543 + LTR33 LTR ERVL 472 516 -5 310 226 88 75 chr20 54802462 54802621 -11865384 - MER102a DNA MER1_type -8 322 162 814 105 0 0 chr20 54802623 54802737 -11865268 - AluSg/x SINE Alu -10 302 189 22 56 0 0 chr20 54802753 54802789 -11865216 + AT_rich Low_complexity Low_complexity 1 36 0 192 236 83 42 chr20 54802977 54803049 -11864956 - MIR SINE MIR -60 202 128 1872 87 58 4 chr20 54803074 54803349 -11864656 - AluSq SINE Alu -17 296 7 1112 184 65 52 chr20 54803520 54803790 -11864215 - LTR8A LTR ERV1 -18 709 385 216 0 0 0 chr20 54803831 54803855 -11864150 + (A)n Simple_repeat Simple_repeat 1 24 0 1902 120 14 0 chr20 54803857 54804182 -11863823 + AluSx SINE Alu 3 331 0 787 157 21 110 chr20 54804182 54804274 -11863731 - L1PB4 LINE L1 -32 6124 6056 864 113 8 38 chr20 54804274 54804407 -11863598 - FLAM_C SINE Alu -1 132 4 787 157 21 110 chr20 54804407 54804505 -11863500 - L1PB4 LINE L1 -100 6056 5951 780 183 0 0 chr20 54804506 54804637 -11863368 - FLAM_A SINE Alu -2 131 1 454 294 14 21 chr20 54805006 54805149 -11862856 - MIR SINE MIR -110 152 11 267 31 0 0 chr20 54805169 54805201 -11862804 + (TG)n Simple_repeat Simple_repeat 2 33 0 210 128 0 0 chr20 54805202 54805241 -11862764 + (GA)n Simple_repeat Simple_repeat 2 40 0 449 203 42 76 chr20 54805458 54805516 -11862489 + MLT1H LTR MaLR 43 97 -452 2225 84 0 7 chr20 54805516 54805814 -11862191 - AluY SINE Alu -15 296 1 449 203 42 76 chr20 54805814 54805873 -11862132 + MLT1H LTR MaLR 97 156 -393 2098 117 0 0 chr20 54805967 54806257 -11861748 + AluSx SINE Alu 2 291 -21 599 238 109 69 chr20 54806279 54806599 -11861406 + MLT1H LTR MaLR 217 549 0 2321 80 13 0 chr20 54806728 54807030 -11860975 - AluSg SINE Alu -4 306 1 721 98 0 170 chr20 54807106 54807259 -11860746 - FLAM_C SINE Alu -15 128 2 594 211 10 0 chr20 54807426 54807530 -11860475 - MER81 DNA DNA -5 109 5 180 0 0 0 chr20 54807535 54807555 -11860450 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 2157 97 0 0 chr20 54807624 54807912 -11860093 + AluSg SINE Alu 1 288 -22 216 0 0 0 chr20 54807914 54807938 -11860067 + (TG)n Simple_repeat Simple_repeat 1 24 0 353 281 49 0 chr20 54807942 54808024 -11859981 + L1MC4 LINE L1 6615 6700 -1342 1334 189 17 90 chr20 54808024 54808379 -11859626 + MLT1A1 LTR MaLR 37 365 0 2065 120 3 0 chr20 54808683 54808982 -11859023 - AluSq SINE Alu -13 300 1 210 71 0 0 chr20 54809104 54809132 -11858873 + (TTCA)n Simple_repeat Simple_repeat 4 31 0 251 290 21 54 chr20 54809135 54809228 -11858777 - L2 LINE L2 -5 3267 3178 808 118 8 0 chr20 54809229 54809348 -11858657 + AluSp SINE Alu 1 120 -193 507 182 189 15 chr20 54809355 54809487 -11858518 - MLT1C LTR MaLR -190 277 123 1477 75 0 0 chr20 54809494 54809680 -11858325 + AluSp SINE Alu 114 299 -14 417 303 88 78 chr20 54809926 54810105 -11857900 - L2 LINE L2 -339 2975 2799 1629 224 82 14 chr20 54810105 54810287 -11857718 + MLT1C LTR MaLR 1 169 -298 2264 72 3 0 chr20 54810287 54810579 -11857426 + AluY SINE Alu 3 295 -16 1629 224 82 14 chr20 54810579 54810833 -11857172 + MLT1C LTR MaLR 169 467 0 417 303 88 78 chr20 54810833 54811218 -11856787 - L2 LINE L2 -515 2799 2405 375 305 57 0 chr20 54811333 54811510 -11856495 - L1MC4a LINE L1 -1899 5909 5723 390 232 182 55 chr20 54811527 54811665 -11856340 + MER112 DNA MER1_type 6 125 -135 200 33 0 33 chr20 54811665 54811695 -11856310 + (CTATT)n Simple_repeat Simple_repeat 3 31 0 390 232 182 55 chr20 54811695 54811776 -11856229 + MER112 DNA MER1_type 125 253 -7 2323 102 0 0 chr20 54811812 54812125 -11855880 + AluSq SINE Alu 1 313 0 854 248 34 30 chr20 54812125 54812359 -11855646 - MIR SINE MIR -22 240 6 297 68 0 0 chr20 54812603 54812647 -11855358 + (TC)n Simple_repeat Simple_repeat 1 44 0 210 171 0 24 chr20 54813450 54813491 -11854514 + T-rich Low_complexity Low_complexity 4 43 0 185 0 40 0 chr20 54813870 54813895 -11854110 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 253 246 53 72 chr20 54815786 54815993 -11852012 - L1ME4a LINE L1 -89 6032 5830 332 314 82 14 chr20 54816193 54816400 -11851605 - L1MC4a LINE L1 -1906 5902 5682 306 321 9 9 chr20 54817892 54818004 -11850001 - L1MC4a LINE L1 -2962 3184 3073 306 246 177 23 chr20 54818198 54818328 -11849677 - MIR SINE MIR -1 261 112 586 247 190 0 chr20 54818368 54818542 -11849463 + MER58A DNA MER1_type 1 207 -17 2017 117 3 0 chr20 54818616 54818915 -11849090 - AluSx SINE Alu -12 300 1 32 26 0 0 chr20 54819245 54819284 -11848721 + AT_rich Low_complexity Low_complexity 1 39 0 983 139 0 13 chr20 54819305 54819463 -11848542 - AluJb SINE Alu -16 296 141 750 154 8 23 chr20 54819729 54819859 -11848146 + FLAM_C SINE Alu 3 130 -3 2031 117 7 10 chr20 54819864 54820171 -11847834 + AluSx SINE Alu 1 306 -6 24 0 0 0 chr20 54820171 54820195 -11847810 + AT_rich Low_complexity Low_complexity 1 24 0 343 245 252 56 chr20 54820413 54820719 -11847286 - L2 LINE L2 -5 3308 2943 493 54 14 14 chr20 54820721 54820795 -11847210 + (TCCC)n Simple_repeat Simple_repeat 1 74 0 1293 161 0 5 chr20 54820810 54821028 -11846977 - AluJb SINE Alu -11 301 85 829 99 56 50 chr20 54821154 54821315 -11846690 - AluSg/x SINE Alu 0 310 149 260 295 26 0 chr20 54821477 54821555 -11846450 - MIR SINE MIR -23 239 160 2196 97 3 19 chr20 54821699 54822007 -11845998 + AluSg SINE Alu 1 303 -7 1647 109 0 21 chr20 54822093 54822167 -11845838 + AluSq SINE Alu 63 137 -176 2152 100 0 0 chr20 54822167 54822483 -11845522 + AluSc SINE Alu 1 316 0 1647 109 0 21 chr20 54822483 54822646 -11845359 + AluSq SINE Alu 137 296 -17 406 245 10 20 chr20 54822976 54823074 -11844931 - MER5A DNA MER1_type -83 106 10 859 218 62 67 chr20 54823091 54823249 -11844756 - MER58A DNA MER1_type -2196 224 66 2238 74 0 3 chr20 54823249 54823547 -11844458 - AluY SINE Alu -14 297 1 859 218 62 67 chr20 54823547 54823613 -11844392 - MER58A DNA MER1_type -2354 66 1 236 278 155 10 chr20 54823613 54823710 -11844295 - MLT1L LTR MaLR -460 155 45 2141 95 0 0 chr20 54823853 54824138 -11843867 + AluSg SINE Alu 1 285 -25 2305 93 0 3 chr20 54824183 54824494 -11843511 - AluSq SINE Alu -3 310 1 26 30 0 0 chr20 54824609 54824642 -11843363 + AT_rich Low_complexity Low_complexity 1 33 0 1369 140 8 8 chr20 54824675 54824911 -11843094 - L1MA5 LINE L1 -2 6298 6063 546 114 0 0 chr20 54825592 54825680 -11842325 + (TG)n Simple_repeat Simple_repeat 1 88 0 190 277 84 0 chr20 54825750 54825828 -11842177 + MIR SINE MIR 19 104 -114 238 225 261 45 chr20 54825924 54826035 -11841970 + MIR SINE MIR 127 261 -1 474 191 122 0 chr20 54826517 54826632 -11841373 - MLT1C LTR MaLR -317 150 22 1365 144 0 0 chr20 54826675 54826883 -11841122 - AluSg/x SINE Alu -9 303 96 2230 98 0 3 chr20 54826957 54827262 -11840743 - AluSg SINE Alu -6 304 1 595 260 16 31 chr20 54827262 54827444 -11840561 + MER46C DNA MER2_type 154 334 -4 228 301 155 0 chr20 54827465 54827568 -11840437 - MIR SINE MIR -136 126 8 348 327 104 48 chr20 54828275 54828669 -11839336 + L1MC4a LINE L1 5812 6227 -1581 300 53 0 0 chr20 54828945 54828983 -11839022 + (TG)n Simple_repeat Simple_repeat 2 39 0 300 27 0 0 chr20 54830702 54830739 -11837266 + (TC)n Simple_repeat Simple_repeat 2 38 0 * 336 24 0 0 chr20 54830738 54830779 -11837226 + (TG)n Simple_repeat Simple_repeat 2 42 0 779 179 64 64 chr20 54830832 54831005 -11837000 - MIR SINE MIR 0 262 90 226 182 45 45 chr20 54831143 54831209 -11836796 + LSAU Satellite Satellite 293 358 -140 424 293 29 48 chr20 54831269 54831477 -11836528 + MIR SINE MIR 15 218 -44 544 266 25 70 chr20 54831914 54831945 -11836060 + MIR SINE MIR 68 99 -163 2279 98 7 0 chr20 54831945 54832251 -11835754 - AluSx SINE Alu -4 308 1 1839 144 10 7 chr20 54832254 54832546 -11835459 - AluJb SINE Alu -19 293 1 544 266 25 70 chr20 54832546 54832709 -11835296 + MIR SINE MIR 101 257 -5 285 281 97 77 chr20 54833342 54833538 -11834467 - MLT1J LTR MaLR -11 500 301 1962 99 10 20 chr20 54833567 54833884 -11834121 + AluSg SINE Alu 1 310 0 2170 99 7 0 chr20 54833900 54834193 -11833812 - AluSx SINE Alu -17 295 1 258 236 0 0 chr20 54834602 54834657 -11833348 - L2 LINE L2 -1 3312 3258 264 276 302 0 chr20 54834821 54834937 -11833068 - MIR SINE MIR -9 253 103 2103 117 0 0 chr20 54834954 54835245 -11832760 - AluSx SINE Alu -21 291 1 200 234 85 53 chr20 54835245 54835339 -11832666 - MIR SINE MIR -152 110 14 308 289 96 32 chr20 54835489 54835676 -11832329 - L2 LINE L2 -249 3023 2825 2100 95 0 3 chr20 54835799 54836106 -11831899 - AluY SINE Alu 0 306 1 2324 50 10 3 chr20 54836108 54836409 -11831596 - AluY SINE Alu -8 303 1 981 119 0 0 chr20 54836453 54836596 -11831409 - FLAM_C SINE Alu 0 143 1 24 0 0 0 chr20 54836839 54836863 -11831142 + AT_rich Low_complexity Low_complexity 1 24 0 2209 97 0 0 chr20 54837240 54837540 -11830465 - AluSg SINE Alu -10 300 1 508 236 93 68 chr20 54837577 54837722 -11830283 + MIR SINE MIR 6 161 -101 2129 96 23 3 chr20 54837722 54838024 -11829981 + AluSx SINE Alu 1 308 -4 508 236 93 68 chr20 54838024 54838115 -11829890 + MIR SINE MIR 161 248 -14 2149 78 42 0 chr20 54838292 54838575 -11829430 - AluSg SINE Alu -15 295 1 602 306 10 20 chr20 54838626 54838825 -11829180 - MER20 DNA MER1_type -22 197 1 1479 155 30 46 chr20 54838884 54839046 -11828959 - AluJo SINE Alu -13 299 143 1948 112 10 3 chr20 54839046 54839340 -11828665 - AluSc SINE Alu -13 296 1 1479 155 30 46 chr20 54839340 54839481 -11828524 - AluJo SINE Alu -169 143 1 1938 98 33 4 chr20 54839578 54839885 -11828120 - AluSx SINE Alu 0 315 1 582 310 140 22 chr20 54839978 54840378 -11827627 + L2 LINE L2 2859 3305 -8 232 256 97 141 chr20 54841506 54841568 -11826437 - MIR SINE MIR 0 262 199 2223 56 46 0 chr20 54841568 54841853 -11826152 - AluY SINE Alu -11 300 3 2278 88 0 3 chr20 54841855 54842150 -11825855 - AluSq SINE Alu -19 294 1 232 256 97 141 chr20 54842150 54842191 -11825814 - MIR SINE MIR -64 198 157 1999 105 3 54 chr20 54842191 54842506 -11825499 - AluSx SINE Alu -13 299 1 1987 124 10 0 chr20 54842506 54842803 -11825202 - AluSx SINE Alu -9 303 3 232 256 97 141 chr20 54842803 54842921 -11825084 - MIR SINE MIR -103 159 46 2134 89 0 3 chr20 54843395 54843716 -11824289 + AluSg SINE Alu 2 310 0 1387 171 31 86 chr20 54843802 54844187 -11823818 + MLT1A1 LTR MaLR 2 365 0 715 326 19 19 chr20 54844972 54845233 -11822772 + MIR SINE MIR 2 262 0 258 322 167 17 chr20 54845316 54845496 -11822509 + MIR SINE MIR 8 214 -48 27 49 0 0 chr20 54845517 54845558 -11822447 + AT_rich Low_complexity Low_complexity 1 41 0 886 164 0 0 chr20 54846230 54846376 -11821629 - AluJb SINE Alu -22 290 145 351 0 0 0 chr20 54846396 54846435 -11821570 + (CA)n Simple_repeat Simple_repeat 2 40 0 335 337 0 0 chr20 54846436 54846525 -11821480 - L1MC4 LINE L1 -1339 6703 6615 2017 132 0 0 chr20 54846543 54846832 -11821173 - AluSx SINE Alu -23 289 1 823 138 0 23 chr20 54846832 54846962 -11821043 - AluJb SINE Alu -184 128 2 471 98 0 0 chr20 54847060 54847121 -11820884 + AluSc SINE Alu 94 154 -155 289 241 21 71 chr20 54847150 54847224 -11820781 + L2 LINE L2 2921 2986 -327 2290 101 0 0 chr20 54847224 54847531 -11820474 - AluSc SINE Alu -2 307 1 289 241 21 71 chr20 54847531 54847597 -11820408 + L2 LINE L2 2986 3054 -259 765 204 10 82 chr20 54847716 54847922 -11820083 - MER20 DNA MER1_type -9 210 20 2188 99 0 3 chr20 54847943 54848237 -11819768 - AluSx SINE Alu -18 294 2 2088 95 0 13 chr20 54848697 54849002 -11819003 - AluSx SINE Alu -11 301 1 23 0 0 0 chr20 54849336 54849359 -11818646 + AT_rich Low_complexity Low_complexity 1 23 0 1838 129 18 0 chr20 54849440 54849761 -11818244 + AluSg SINE Alu 1 326 0 2208 107 0 0 chr20 54849798 54850096 -11817909 + AluSc SINE Alu 1 298 -11 803 207 128 11 chr20 54850322 54850501 -11817504 + MER58A DNA MER1_type 10 209 -15 261 219 307 7 chr20 54850545 54850682 -11817323 + MIR SINE MIR 36 213 -49 1231 282 103 55 chr20 54850891 54851625 -11816380 + L3 LINE CR1 557 1326 -251 2318 94 3 0 chr20 54852007 54852315 -11815690 + AluSx SINE Alu 1 309 -3 520 205 94 17 chr20 54852359 54852476 -11815529 - FLAM_C SINE Alu -16 127 2 255 225 28 14 chr20 54852580 54852651 -11815354 + MLT1K LTR MaLR 512 583 -5 1895 88 95 11 chr20 54852744 54853028 -11814977 + AluSg SINE Alu 1 308 -2 386 225 102 35 chr20 54853094 54853263 -11814742 + MIR SINE MIR 22 195 -60 445 70 0 0 chr20 54853266 54853323 -11814682 - MLT1D LTR MaLR -2 503 447 1388 173 0 48 chr20 54853336 54853653 -11814352 + AluJb SINE Alu 8 310 0 1619 137 17 47 chr20 54853658 54853957 -11814048 + AluJo SINE Alu 1 290 -22 1896 138 0 0 chr20 54853987 54854291 -11813714 - AluSx SINE Alu 0 304 1 287 318 61 15 chr20 54854346 54854497 -11813508 + MIR SINE MIR 20 140 -68 204 394 29 15 chr20 54855073 54855144 -11812861 + MIR3 SINE MIR 25 93 -115 1959 129 7 0 chr20 54855144 54855438 -11812567 - AluSx SINE Alu -16 296 1 204 394 29 15 chr20 54855438 54855503 -11812502 + MIR3 SINE MIR 93 163 -45 2216 87 3 7 chr20 54855681 54855981 -11812024 + AluSp SINE Alu 1 299 -14 466 189 0 0 chr20 54856076 54856150 -11811855 + MER20 DNA MER1_type 146 219 0 602 321 98 26 chr20 54856207 54856584 -11811421 - L1MC4a LINE L1 -1877 5931 5528 372 229 0 66 chr20 54856882 54856913 -11811092 - Charlie8 DNA MER1_type -153 188 157 2176 96 10 6 chr20 54856913 54857225 -11810780 - AluSp SINE Alu 0 313 1 2034 132 6 3 chr20 54857225 54857536 -11810469 - AluJo SINE Alu 0 312 1 372 229 0 66 chr20 54857536 54857625 -11810380 - Charlie8 DNA MER1_type -182 159 75 1166 199 29 18 chr20 54857626 54857664 -11810341 - L1MB4 LINE L1 -306 5874 5838 1919 118 31 0 chr20 54857664 54857951 -11810054 - AluSx SINE Alu -10 302 7 1166 199 29 18 chr20 54857951 54858189 -11809816 - L1MB4 LINE L1 -342 5838 5595 2040 90 0 21 chr20 54858520 54858837 -11809168 + AluSq SINE Alu 1 311 0 1964 147 0 0 chr20 54858839 54859139 -11808866 + AluSx SINE Alu 1 300 -12 219 196 109 0 chr20 54859318 54859364 -11808641 - MIR SINE MIR -189 73 23 663 282 75 14 chr20 54859478 54859833 -11808172 - L1MC/D LINE L1 -383 5738 5439 2359 219 19 84 chr20 54859864 54859916 -11808089 + L1ME1 LINE L1 5466 5520 -646 1819 147 10 10 chr20 54859916 54860208 -11807797 + AluSx SINE Alu 1 292 -20 2193 103 3 0 chr20 54860216 54860516 -11807489 + AluSp SINE Alu 11 311 -2 2359 219 19 84 chr20 54860516 54861201 -11806804 + L1ME1 LINE L1 5527 6163 -3 1831 174 0 0 chr20 54861225 54861529 -11806476 + AluJb SINE Alu 1 304 -8 970 222 67 25 chr20 54861541 54861630 -11806375 - MER2 DNA MER2_type 0 345 261 2264 81 0 7 chr20 54861630 54861927 -11806078 + AluSp SINE Alu 2 296 -17 970 222 67 25 chr20 54861927 54862076 -11805929 - MER2 DNA MER2_type -84 261 97 1391 195 0 0 chr20 54862080 54862342 -11805663 - AluJb SINE Alu -13 299 38 673 137 0 0 chr20 54862342 54862437 -11805568 - MER2 DNA MER2_type -250 95 1 337 381 30 42 chr20 54863098 54863334 -11804671 - MIR SINE MIR -14 248 16 1259 132 30 0 chr20 54863620 54863817 -11804188 - MER20 DNA MER1_type -4 215 13 2216 92 3 0 chr20 54864086 54864379 -11803626 - AluSp SINE Alu -19 294 1 426 301 22 23 chr20 54864388 54864595 -11803410 - MIR SINE MIR -10 252 45 537 306 108 55 chr20 54864622 54864923 -11803082 - L1ME4a LINE L1 -8 6113 5829 1536 177 3 7 chr20 54864923 54865206 -11802799 + AluJo SINE Alu 3 284 -28 249 33 0 0 chr20 54865206 54865236 -11802769 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 537 306 108 55 chr20 54865236 54865407 -11802598 - L1ME4a LINE L1 -291 5830 5615 295 245 43 21 chr20 54865440 54865534 -11802471 - L1ME4a LINE L1 -500 5621 5526 2197 107 0 0 chr20 54865598 54865897 -11802108 + AluSx SINE Alu 1 299 -13 366 107 0 0 chr20 54865898 54865954 -11802051 + (CA)n Simple_repeat Simple_repeat 2 57 0 331 237 62 10 chr20 54866736 54866833 -11801172 + MIR SINE MIR 117 218 -44 1862 151 0 7 chr20 54866894 54867193 -11800812 - AluSx SINE Alu -9 303 7 525 229 8 16 chr20 54867223 54867345 -11800660 + MLT1H LTR MaLR 40 160 -389 2127 115 0 6 chr20 54868053 54868365 -11799640 - AluSg SINE Alu 0 310 1 261 0 0 0 chr20 54868467 54868496 -11799509 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2106 108 0 3 chr20 54868499 54868794 -11799211 - AluSq SINE Alu -19 294 1 1923 229 48 41 chr20 54868795 54869359 -11798646 - L1ME2 LINE L1 -34 6130 5563 1691 258 53 61 chr20 54869461 54870003 -11798002 + MLT1H LTR MaLR 12 549 0 290 250 94 67 chr20 54870023 54870136 -11797869 + MIR SINE MIR 65 186 -76 1988 138 0 3 chr20 54870136 54870432 -11797573 + AluSg SINE Alu 1 295 -15 290 250 94 67 chr20 54870432 54870498 -11797507 + MIR SINE MIR 186 249 -13 382 303 96 62 chr20 54871036 54871085 -11796920 + L2 LINE L2 2818 2864 -449 1956 133 0 3 chr20 54871085 54871379 -11796626 - AluSx SINE Alu -14 298 6 382 303 96 62 chr20 54871379 54871537 -11796468 + L2 LINE L2 2864 3032 -281 548 202 85 53 chr20 54871540 54871728 -11796277 + MER63 DNA MER1_type 756 949 -112 1872 66 0 0 chr20 54871734 54871978 -11796027 - L1MA1 LINE L1 0 6302 6059 1540 171 7 27 chr20 54871979 54872271 -11795734 - AluJo SINE Alu -14 298 13 2437 57 0 0 chr20 54872289 54872587 -11795418 - AluY SINE Alu -13 298 1 1115 182 55 110 chr20 54872608 54872946 -11795059 - L1MB4 LINE L1 -8 6172 5852 2248 86 0 10 chr20 54872946 54873260 -11794745 - AluSq SINE Alu -1 312 2 1391 172 72 4 chr20 54873300 54873562 -11794443 + AluJo SINE Alu 1 280 -32 22 56 0 0 chr20 54873569 54873605 -11794400 + AT_rich Low_complexity Low_complexity 1 36 0 554 191 9 18 chr20 54873605 54873715 -11794290 + MER63 DNA MER1_type 944 1052 -8 905 183 6 0 chr20 54873887 54874056 -11793949 + AluJb SINE Alu 140 309 -3 1708 144 30 0 chr20 54874148 54874418 -11793587 - AluSx SINE Alu -29 283 6 2311 183 16 2 chr20 54874427 54874787 -11793218 + MSTB1 LTR MaLR 1 369 -63 1563 174 0 0 chr20 54874787 54875046 -11792959 - AluJo SINE Alu -15 297 39 2311 183 16 2 chr20 54875046 54875111 -11792894 + MSTB1 LTR MaLR 369 432 0 3379 178 24 9 chr20 54875157 54875827 -11792178 - L1MB8 LINE L1 -1 6177 5498 2277 97 0 0 chr20 54876013 54876313 -11791692 + AluSc SINE Alu 1 300 -9 381 310 38 47 chr20 54876713 54876865 -11791140 + MIR SINE MIR 39 189 -73 1465 164 20 30 chr20 54876865 54877164 -11790841 - AluJo SINE Alu -14 298 3 381 310 38 47 chr20 54877164 54877223 -11790782 + MIR SINE MIR 189 247 -15 374 333 8 0 chr20 54877453 54877582 -11790423 + MER94 DNA DNA 5 134 0 502 266 120 21 chr20 54877927 54878119 -11789886 - MIR SINE MIR -36 226 16 2090 124 0 0 chr20 54878324 54878630 -11789375 - AluSg SINE Alu -4 306 1 1245 236 96 9 chr20 54878641 54878984 -11789021 + Charlie4a DNA MER1_type 120 492 -16 2067 130 13 0 chr20 54879133 54879441 -11788564 - AluSx SINE Alu 0 312 1 436 299 0 52 chr20 54879442 54879596 -11788409 - L2 LINE L2 0 3313 3168 733 133 37 15 chr20 54879753 54879888 -11788117 - MER63 DNA MER1_type -9 1053 916 1947 64 12 0 chr20 54879935 54880186 -11787819 - AluY SINE Alu -19 292 39 249 139 0 0 chr20 54880225 54880268 -11787737 + (TCCC)n Simple_repeat Simple_repeat 1 43 0 1676 189 3 0 chr20 54880268 54880564 -11787441 - AluJo SINE Alu -11 301 5 1649 148 6 53 chr20 54880814 54880983 -11787022 - AluJo SINE Alu -22 290 154 2336 103 0 0 chr20 54880983 54881284 -11786721 - AluSg SINE Alu -9 301 1 1649 148 6 53 chr20 54881284 54881432 -11786573 - AluJo SINE Alu -158 154 1 595 290 49 37 chr20 54882299 54882544 -11785461 - Charlie8 DNA MER1_type -2157 260 13 304 266 64 28 chr20 54882565 54882674 -11785331 + L2 LINE L2 3160 3272 0 1798 155 22 7 chr20 54882841 54883143 -11784862 + AluJb SINE Alu 1 306 0 189 0 0 0 chr20 54883144 54883165 -11784840 + (TTAAA)n Simple_repeat Simple_repeat 5 25 0 1742 163 0 77 chr20 54883168 54883506 -11784499 + AluJb SINE Alu 1 312 0 344 248 34 43 chr20 54883571 54883688 -11784317 - MIR SINE MIR -75 187 72 * 688 291 106 35 chr20 54883647 54884128 -11783877 + L2 LINE L2 2712 3218 -95 540 0 0 0 chr20 54884128 54884188 -11783817 + (TA)n Simple_repeat Simple_repeat 2 61 0 688 291 106 35 chr20 54884188 54884251 -11783754 + L2 LINE L2 3218 3275 -38 2607 43 0 13 chr20 54884293 54884598 -11783407 - AluY SINE Alu -10 301 1 382 223 48 0 chr20 54884619 54884722 -11783283 + MIR SINE MIR 44 151 -111 823 167 10 56 chr20 54884851 54885049 -11782956 - MER53 DNA DNA 0 189 1 2226 99 0 0 chr20 54885151 54885460 -11782545 + AluSx SINE Alu 1 309 0 258 143 0 0 chr20 54885460 54885502 -11782503 + MIR SINE MIR 221 262 0 238 174 0 22 chr20 54885535 54885581 -11782424 + MIR SINE MIR 217 261 -1 348 98 0 0 chr20 54886364 54886415 -11781590 + L1PA16 LINE L1 6116 6166 0 389 311 21 22 chr20 54886640 54886878 -11781127 - L1ME4a LINE L1 -202 5919 5707 1722 132 29 36 chr20 54886879 54887159 -11780846 + AluJb SINE Alu 26 303 -9 390 324 23 6 chr20 54887598 54887774 -11780231 - MIR SINE MIR -35 227 49 2138 117 3 3 chr20 54887825 54888124 -11779881 + AluSx SINE Alu 1 299 -13 295 266 119 9 chr20 54888349 54888458 -11779547 + MIR SINE MIR 108 228 -34 2317 91 3 3 chr20 54888684 54888980 -11779025 + AluSg1 SINE Alu 1 296 -13 2101 134 0 10 chr20 54888985 54889299 -11778706 + AluSx SINE Alu 1 311 -1 2459 66 0 3 chr20 54889601 54889903 -11778102 - AluY SINE Alu -10 301 1 1792 158 136 17 chr20 54890126 54890480 -11777525 + MSTD LTR MaLR 1 396 0 325 265 61 38 chr20 54890486 54890618 -11777387 + L2 LINE L2 3136 3270 -2 2316 80 0 26 chr20 54891038 54891349 -11776656 + AluY SINE Alu 1 303 -8 2014 169 107 17 chr20 54891562 54891965 -11776040 + LTR51 LTR ERV1 1 439 -232 15532 153 33 14 chr20 54891969 54893064 -11774941 - L1 LINE L1 -1995 5570 4497 2254 125 0 0 chr20 54893064 54893369 -11774636 - AluSx SINE Alu -7 305 1 15532 153 33 14 chr20 54893369 54894145 -11773860 - L1 LINE L1 -3068 4497 3737 2273 96 3 10 chr20 54894145 54894459 -11773546 - AluSx SINE Alu 0 312 1 15532 153 33 14 chr20 54894459 54895847 -11772158 - L1 LINE L1 -3828 3737 2203 1979 172 0 0 chr20 54895847 54896155 -11771850 - AluJb SINE Alu -3 309 2 15532 153 33 14 chr20 54896155 54897278 -11770727 - L1 LINE L1 -5362 2203 1103 495 155 52 52 chr20 54897272 54897388 -11770617 - L1 LINE L1 -7430 135 20 * 924 162 7 7 chr20 54897399 54897547 -11770458 - MER2 DNA MER2_type -197 148 1 2139 132 0 3 chr20 54897576 54897872 -11770133 + AluSq SINE Alu 1 295 -18 301 310 69 35 chr20 54897898 54897924 -11770081 - L1ME4a LINE L1 -254 5867 5843 2363 97 7 3 chr20 54897924 54898233 -11769772 - AluSq SINE Alu -3 310 1 301 310 69 35 chr20 54898233 54898351 -11769654 - L1ME4a LINE L1 -278 5843 5718 2267 107 0 3 chr20 54898685 54898975 -11769030 - AluSx SINE Alu -23 289 1 2204 113 3 10 chr20 54899033 54899335 -11768670 - AluSx SINE Alu -12 300 1 501 270 53 0 chr20 54899337 54899489 -11768516 - L1ME3A LINE L1 -1 6169 6010 1230 148 168 31 chr20 54899655 54899911 -11768094 + AluJb SINE Alu 1 291 -11 692 297 28 48 chr20 54899928 54900322 -11767683 - L2 LINE L2 -337 2977 2592 341 210 31 31 chr20 54900326 54900451 -11767554 - MLT1H1 LTR MaLR -2 558 436 2267 84 0 13 chr20 54900484 54900807 -11767198 - AluY SINE Alu 0 311 1 847 142 0 8 chr20 54900840 54900967 -11767038 + FLAM_C SINE Alu 1 126 -17 1179 196 45 26 chr20 54900969 54901235 -11766770 - L1MEc LINE L1 -5579 817 547 25 65 0 0 chr20 54901343 54901389 -11766616 + AT_rich Low_complexity Low_complexity 1 46 0 547 268 26 11 chr20 54901403 54901593 -11766412 - L1MEc LINE L1 -5920 476 284 185 200 22 0 chr20 54901611 54901656 -11766349 - L2 LINE L2 -965 2349 2304 1828 91 19 0 chr20 54901709 54901972 -11766033 + L1PB2 LINE L1 5882 6149 -2 1142 177 14 32 chr20 54902819 54903039 -11764966 - MER20 DNA MER1_type -2 217 2 1752 170 3 19 chr20 54903088 54903399 -11764606 + AluJo SINE Alu 5 310 -2 2368 141 55 20 chr20 54903696 54904101 -11763904 - MSTC LTR MaLR -7 409 1 379 175 10 21 chr20 54904351 54904448 -11763557 + CT-rich Low_complexity Low_complexity 3 98 0 198 0 0 0 chr20 54907465 54907487 -11760518 + (T)n Simple_repeat Simple_repeat 1 22 0 1866 122 0 0 chr20 54907493 54907738 -11760267 - AluSx SINE Alu -67 245 1 308 227 58 84 chr20 54907754 54907930 -11760075 + L2 LINE L2 3021 3191 -122 1544 172 9 21 chr20 54907930 54908012 -11759993 - MER33 DNA MER1_type -2261 324 243 1953 158 0 19 chr20 54908012 54908328 -11759677 + AluJb SINE Alu 1 310 -2 1544 172 9 21 chr20 54908328 54908570 -11759435 - MER33 DNA MER1_type -2342 243 4 308 227 58 84 chr20 54908570 54908618 -11759387 + L2 LINE L2 3191 3239 -74 203 226 130 61 chr20 54909088 54909203 -11758802 - L2 LINE L2 -12 3260 3138 623 234 27 38 chr20 54909229 54909384 -11758621 + MIR SINE MIR 8 162 -100 2170 114 90 3 chr20 54909384 54909718 -11758287 - THE1B LTR MaLR -1 363 1 623 234 27 38 chr20 54909718 54909746 -11758259 + MIR SINE MIR 162 189 -73 2373 154 73 5 chr20 54909756 54910179 -11757826 - LTR47A LTR ERVL 0 452 1 293 68 0 0 chr20 54910286 54910330 -11757675 - MADE1 DNA Mariner -36 44 1 285 345 81 15 chr20 54910367 54910564 -11757441 - L2 LINE L2 -194 3078 2869 297 75 0 0 chr20 54910955 54910995 -11757010 + (TC)n Simple_repeat Simple_repeat 2 41 0 23 0 0 0 chr20 54911118 54911141 -11756864 + AT_rich Low_complexity Low_complexity 1 23 0 1963 138 3 45 chr20 54911192 54911504 -11756501 - AluSx SINE Alu -13 299 1 422 332 28 77 chr20 54911511 54911697 -11756308 + L2 LINE L2 2725 2888 -425 2367 55 0 62 chr20 54911697 54912006 -11755999 - AluSc SINE Alu -19 290 1 422 332 28 77 chr20 54912006 54912157 -11755848 + L2 LINE L2 2888 3045 -268 2051 207 56 0 chr20 54912157 54912567 -11755438 - MER68 LTR ERV1 0 562 130 251 173 40 13 chr20 54912695 54912770 -11755235 + A-rich Low_complexity Low_complexity 1 77 0 2374 91 0 7 chr20 54912889 54913196 -11754809 + AluY SINE Alu 1 305 -6 1912 118 45 17 chr20 54913363 54913652 -11754353 + AluSx SINE Alu 1 297 -15 629 212 53 0 chr20 54913670 54913802 -11754203 - MER68 LTR ERV1 -423 139 1 326 344 61 23 chr20 54913802 54914064 -11753941 + L2 LINE L2 3041 3312 -1 442 114 25 0 chr20 54914279 54914358 -11753647 + T-rich Low_complexity Low_complexity 1 81 0 * 865 146 6 12 chr20 54914356 54914527 -11753478 + CT-rich Low_complexity Low_complexity 2 171 0 507 212 53 0 chr20 54914577 54914690 -11753315 - L1PB4 LINE L1 -1 6155 6037 186 43 0 0 chr20 54914732 54914755 -11753250 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1704 97 0 0 chr20 54914760 54914976 -11753029 - AluSc SINE Alu -93 216 1 26 0 0 0 chr20 54914987 54915013 -11752992 + AT_rich Low_complexity Low_complexity 1 26 0 674 128 34 0 chr20 54915013 54915130 -11752875 - AluSg/x SINE Alu -4 308 188 235 307 88 80 chr20 54915130 54915267 -11752738 - MIR SINE MIR -113 149 12 275 0 29 0 chr20 54915278 54915313 -11752692 + (CA)n Simple_repeat Simple_repeat 2 37 0 1951 116 0 15 chr20 54915431 54915699 -11752306 + AluSx SINE Alu 29 292 -20 1863 68 0 0 chr20 54915705 54915924 -11752081 + AluSp SINE Alu 1 219 -94 854 108 0 0 chr20 54915924 54916044 -11751961 + AluSp/q SINE Alu 188 307 -6 289 276 0 13 chr20 54916044 54916120 -11751885 + CT-rich Low_complexity Low_complexity 3 77 0 270 137 0 0 chr20 54916130 54916181 -11751824 - L2 LINE L2 -41 3231 3181 200 163 47 0 chr20 54916655 54916698 -11751307 + CT-rich Low_complexity Low_complexity 3 47 0 2036 141 0 7 chr20 54916870 54917160 -11750845 + AluSx SINE Alu 1 288 -24 213 108 0 0 chr20 54917160 54917197 -11750808 + (CTA)n Simple_repeat Simple_repeat 2 38 0 247 294 34 68 chr20 54917235 54917381 -11750624 - MIR SINE MIR -62 200 60 1404 179 35 1 chr20 54917769 54918064 -11749941 + L1MB8 LINE L1 5640 5942 -229 920 93 0 31 chr20 54918076 54918205 -11749800 + AluJo SINE Alu 11 135 -177 21 36 0 0 chr20 54918211 54918239 -11749766 + AT_rich Low_complexity Low_complexity 1 28 0 928 115 0 29 chr20 54918239 54918378 -11749627 + AluJo SINE Alu 1 135 -177 21 36 0 0 chr20 54918384 54918412 -11749593 + AT_rich Low_complexity Low_complexity 1 28 0 1840 156 33 10 chr20 54918412 54918714 -11749291 + AluJo SINE Alu 1 309 -3 866 190 40 67 chr20 54918717 54918970 -11749035 + L1MB8 LINE L1 5932 6177 -1 15307 119 24 30 chr20 54919016 54919916 -11748089 + Tigger1 DNA MER2_type 1 905 -1513 2375 108 0 0 chr20 54919916 54920221 -11747784 + AluSg SINE Alu 1 305 -5 15307 119 24 30 chr20 54920221 54921182 -11746823 + Tigger1 DNA MER2_type 905 1846 -572 2034 141 7 0 chr20 54921182 54921486 -11746519 + AluSx SINE Alu 1 306 -6 15307 119 24 30 chr20 54921486 54922056 -11745949 + Tigger1 DNA MER2_type 1846 2418 0 1939 141 0 3 chr20 54922059 54922342 -11745663 - AluSx SINE Alu -10 302 21 3967 138 13 34 chr20 54922342 54923117 -11744888 - L1MC1 LINE L1 -425 5908 5152 1302 204 46 62 chr20 54923097 54923182 -11744823 - L1MCa LINE L1 -6089 337 252 * 1826 71 4 0 chr20 54923182 54923408 -11744597 - AluSp SINE Alu -14 299 73 1302 204 46 62 chr20 54923408 54923646 -11744359 - L1MCa LINE L1 -6174 252 19 207 0 0 0 chr20 54923702 54923725 -11744280 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 293 329 48 30 chr20 54923829 54924036 -11743969 + MIR SINE MIR 2 211 -51 265 282 18 45 chr20 54924646 54924756 -11743249 + MIR SINE MIR 37 143 -119 403 244 58 87 chr20 54925298 54925391 -11742614 + MER106A DNA MER1_type 1 95 -141 2368 73 17 23 chr20 54925391 54925691 -11742314 + AluSx SINE Alu 1 298 -14 432 0 0 0 chr20 54925691 54925739 -11742266 + (TCTA)n Simple_repeat Simple_repeat 2 49 0 2440 74 0 7 chr20 54925739 54926036 -11741969 + AluSq SINE Alu 2 296 -17 403 244 58 87 chr20 54926036 54926182 -11741823 + MER106A DNA MER1_type 92 235 -1 282 256 93 0 chr20 54926423 54926509 -11741496 + MIR SINE MIR 56 149 -113 2362 81 3 13 chr20 54926612 54926920 -11741085 + AluSg1 SINE Alu 2 306 -3 365 325 34 39 chr20 54926960 54927166 -11740839 - MIR SINE MIR -52 210 6 325 163 33 2 chr20 54927420 54927498 -11740507 - L1ME1 LINE L1 -18 6148 6083 2130 134 0 0 chr20 54927500 54927798 -11740207 - AluSx SINE Alu -14 298 1 607 200 85 43 chr20 54927799 54927829 -11740176 - L1M4 LINE L1 -810 5336 5309 2356 106 3 0 chr20 54927829 54928140 -11739865 - AluSq SINE Alu -1 312 1 607 200 85 43 chr20 54928140 54928344 -11739661 - L1M4 LINE L1 -837 5309 5092 1018 298 90 6 chr20 54928462 54928794 -11739211 + LTR16B LTR ERVL 13 372 -92 584 285 63 19 chr20 54928894 54929101 -11738904 - MER102a DNA MER1_type 0 330 115 2346 91 3 3 chr20 54929104 54929401 -11738604 - AluSx SINE Alu -14 298 2 289 362 34 0 chr20 54929414 54929563 -11738442 - MIR3 SINE MIR -49 159 6 1524 254 112 32 chr20 54929595 54930130 -11737875 - MLT1E LTR MaLR -15 578 1 198 0 0 0 chr20 54930240 54930262 -11737743 + (GGGGA)n Simple_repeat Simple_repeat 4 25 0 775 97 8 8 chr20 54930264 54930388 -11737617 + (GGAA)n Simple_repeat Simple_repeat 1 124 0 183 80 0 0 chr20 54930399 54930424 -11737581 + (TCTCCC)n Simple_repeat Simple_repeat 1 25 0 11393 32 12 59 chr20 54930429 54931879 -11736126 + SVA Other Other 2 1384 -2 2351 106 0 3 chr20 54932060 54932372 -11735633 - AluSx SINE Alu -1 311 1 3405 156 41 72 chr20 54932580 54933293 -11734712 - LTR8 LTR ERV1 0 691 1 527 225 14 29 chr20 54933354 54933492 -11734513 - MIR SINE MIR -70 192 57 422 170 111 67 chr20 54933649 54933784 -11734221 + MIR SINE MIR 5 145 -117 190 171 0 24 chr20 54933840 54933881 -11734124 + L2 LINE L2 3265 3304 -9 255 286 13 0 chr20 54934686 54934763 -11733242 + MIR SINE MIR 169 246 -16 233 315 37 9 chr20 54935003 54935111 -11732894 + L2 LINE L2 3203 3313 0 2672 86 0 11 chr20 54935146 54935517 -11732488 - L1PB1 LINE L1 0 6151 5785 350 152 0 51 chr20 54935520 54935658 -11732347 + (TA)n Simple_repeat Simple_repeat 1 131 0 857 111 16 0 chr20 54935658 54935784 -11732221 - L1PB1 LINE L1 -360 5791 5664 1257 112 11 6 chr20 54935784 54935962 -11732043 - AluSg/x SINE Alu -9 301 123 494 113 17 8 chr20 54935963 54936062 -11731943 - L1P5 LINE L1 -483 5668 5568 314 191 15 0 chr20 54936138 54936206 -11731799 - MLT1F1 LTR MaLR 0 542 474 24 32 0 0 chr20 54936211 54936242 -11731763 + AT_rich Low_complexity Low_complexity 1 31 0 1879 233 109 15 chr20 54936261 54936729 -11731276 - MLT1F1 LTR MaLR -52 515 4 576 197 111 35 chr20 54936810 54937008 -11730997 - MER69 DNA AcHobo -17 2509 2297 1076 88 0 0 chr20 54937008 54937145 -11730860 - AluSg/x SINE Alu -22 288 152 442 227 78 19 chr20 54937148 54937302 -11730703 - MER69 DNA AcHobo -236 2290 2128 1496 180 47 18 chr20 54937303 54937581 -11730424 - AluJo SINE Alu -25 287 2 1790 217 7 20 chr20 54937581 54938023 -11729982 - MER69 DNA AcHobo -360 2166 1731 1928 162 3 0 chr20 54938099 54938395 -11729610 + AluSx SINE Alu 1 297 -15 697 253 81 0 chr20 54938490 54938664 -11729341 + MER58B DNA MER1_type 150 337 -4 284 286 79 29 chr20 54938764 54938904 -11729101 + L2 LINE L2 2923 3069 -244 1847 133 56 3 chr20 54938917 54939090 -11728915 - AluSx SINE Alu -9 303 108 1607 17 0 0 chr20 54939090 54939296 -11728709 - SVA Other Other 0 1386 1204 1847 133 56 3 chr20 54939296 54939407 -11728598 - AluSx SINE Alu -204 108 4 874 291 17 0 chr20 54939562 54939803 -11728202 + MIR SINE MIR 16 260 -2 296 246 116 80 chr20 54940171 54940309 -11727696 - MLT1H LTR MaLR -3 546 404 182 194 0 0 chr20 54941599 54941635 -11726370 - MIR SINE MIR -118 144 109 216 0 0 0 chr20 54943151 54943175 -11724830 + (TC)n Simple_repeat Simple_repeat 1 24 0 378 263 158 0 chr20 54944778 54944911 -11723094 - MER20 DNA MER1_type -6 213 60 585 227 8 0 chr20 54944922 54945041 -11722964 + FLAM_A SINE Alu 1 120 -13 324 94 113 0 chr20 54945041 54945200 -11722805 + (TA)n Simple_repeat Simple_repeat 2 178 0 * 338 121 83 0 chr20 54945165 54945322 -11722683 + (TTATA)n Simple_repeat Simple_repeat 5 174 0 361 65 120 9 chr20 54945345 54945677 -11722328 + (TA)n Simple_repeat Simple_repeat 1 368 0 301 73 52 64 chr20 54945693 54945952 -11722053 + (TA)n Simple_repeat Simple_repeat 1 255 0 28 48 0 0 chr20 54945969 54946011 -11721994 + AT_rich Low_complexity Low_complexity 1 42 0 1241 151 73 5 chr20 54946016 54946222 -11721783 + AluJb SINE Alu 86 305 -7 442 259 154 83 chr20 54947132 54947495 -11720510 + L2 LINE L2 2920 3308 -5 1971 104 71 0 chr20 54947813 54948081 -11719924 + AluSg SINE Alu 9 295 -15 228 283 104 9 chr20 54948601 54948707 -11719298 - MIR SINE MIR -44 218 103 472 192 0 0 chr20 54949209 54949308 -11718697 + L1MB8 LINE L1 6079 6177 -1 293 0 27 0 chr20 54949400 54949437 -11718568 + (TG)n Simple_repeat Simple_repeat 2 39 0 369 131 0 0 chr20 54949806 54949867 -11718138 + (GA)n Simple_repeat Simple_repeat 1 61 0 1350 198 60 14 chr20 54950316 54950599 -11717406 - AluJo SINE Alu -16 296 1 2283 112 0 0 chr20 54950610 54950906 -11717099 - AluSg SINE Alu -14 296 1 232 275 153 84 chr20 54952540 54952832 -11715173 + L2 LINE L2 2422 2693 -620 2249 87 11 3 chr20 54952832 54953118 -11714887 - AluSx SINE Alu -24 288 1 232 275 153 84 chr20 54953118 54953575 -11714430 + L2 LINE L2 2693 3241 -72 538 282 145 49 chr20 54953674 54954279 -11713726 + L2 LINE L2 2379 3086 -227 1671 179 0 4 chr20 54954279 54954559 -11713446 + AluJb SINE Alu 1 279 -33 538 282 145 49 chr20 54954559 54954811 -11713194 + L2 LINE L2 3086 3312 -1 336 328 34 73 chr20 54954911 54955268 -11712737 - L2 LINE L2 0 3272 2930 366 298 64 23 chr20 54955774 54955945 -11712060 - MIR SINE MIR -80 182 5 2258 85 0 0 chr20 54956110 54956415 -11711590 + AluSx SINE Alu 1 305 0 234 81 0 0 chr20 54956537 54956574 -11711431 + (CAGA)n Simple_repeat Simple_repeat 2 38 0 184 254 0 75 chr20 54957084 54957151 -11710854 + L2 LINE L2 3211 3272 0 2034 108 34 10 chr20 54957323 54957619 -11710386 + AluSx SINE Alu 1 303 -9 2187 94 23 17 chr20 54957621 54957920 -11710085 + AluY SINE Alu 3 303 -8 22 0 0 0 chr20 54958502 54958524 -11709481 + AT_rich Low_complexity Low_complexity 1 22 0 194 317 0 0 chr20 54958619 54958679 -11709326 + MIR SINE MIR 47 106 -156 6900 109 6 46 chr20 54958717 54959759 -11708246 - L1MA2 LINE L1 0 6304 5311 1687 139 49 21 chr20 54959759 54960047 -11707958 - AluJb SINE Alu -16 296 1 6900 109 6 46 chr20 54960047 54960219 -11707786 - L1MA2 LINE L1 -993 5311 5134 431 234 12 66 chr20 54960226 54960393 -11707612 + MIR SINE MIR 99 256 -6 1831 131 35 31 chr20 54960522 54960812 -11707193 + AluSx SINE Alu 2 292 -20 260 267 109 10 chr20 54960819 54960920 -11707085 + MIR SINE MIR 20 130 -78 180 274 151 0 chr20 54961116 54961189 -11706816 - L2 LINE L2 0 3272 3189 333 0 0 0 chr20 54961332 54961369 -11706636 + (CA)n Simple_repeat Simple_repeat 2 38 0 414 320 82 8 chr20 54961717 54961961 -11706044 + MIR SINE MIR 1 262 0 191 253 137 11 chr20 54962059 54962154 -11705851 + L2 LINE L2 2946 3052 -261 486 244 92 12 chr20 54962160 54962258 -11705747 - MER5B DNA MER1_type 0 178 60 2395 79 0 0 chr20 54962258 54962548 -11705457 - AluSc SINE Alu -18 291 2 486 244 92 12 chr20 54962548 54962613 -11705392 - MER5B DNA MER1_type -118 60 2 897 218 25 30 chr20 54962627 54962829 -11705176 + MIR SINE MIR 2 202 -60 2279 118 6 41 chr20 54962864 54963227 -11704778 + MER4B LTR ERV1 6 355 -255 309 51 0 0 chr20 54963243 54963282 -11704723 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2255 89 0 0 chr20 54963285 54963567 -11704438 - AluSq SINE Alu -31 282 1 234 167 74 0 chr20 54963637 54963691 -11704314 - MIR SINE MIR -60 202 145 1293 178 27 0 chr20 54963722 54963947 -11704058 + MER4E LTR ERV1 536 766 0 22 0 0 0 chr20 54963973 54963995 -11704010 + AT_rich Low_complexity Low_complexity 1 22 0 3131 162 55 31 chr20 54963997 54964064 -11703941 - L1MB4 LINE L1 -1 6179 6115 2361 41 45 3 chr20 54964064 54964354 -11703651 + AluY SINE Alu 1 302 -9 3131 162 55 31 chr20 54964354 54964788 -11703217 - L1MB4 LINE L1 -65 6115 5655 2261 111 0 0 chr20 54964788 54965086 -11702919 + AluSx SINE Alu 1 298 -14 3131 162 55 31 chr20 54965086 54965261 -11702744 - L1MB4 LINE L1 -525 5655 5486 1661 208 18 18 chr20 54965422 54965763 -11702242 + MER58B DNA MER1_type 1 341 0 602 219 78 5 chr20 54965866 54966071 -11701934 + L1ME2 LINE L1 4966 5185 -961 1182 187 50 5 chr20 54966079 54966277 -11701728 + MER8 DNA MER2_type 33 239 0 479 143 143 15 chr20 54966277 54966410 -11701595 + L1ME2 LINE L1 5184 5333 -813 2071 200 109 75 chr20 54966414 54966724 -11701281 + L1ME2 LINE L1 5416 5714 -450 2157 134 0 0 chr20 54966724 54967023 -11700982 - AluSx SINE Alu -13 299 1 2071 200 109 75 chr20 54967023 54967436 -11700569 + L1ME2 LINE L1 5714 6164 0 2038 202 32 49 chr20 54968009 54968515 -11699490 - MLT1D LTR MaLR 0 505 9 395 323 36 24 chr20 54968704 54968871 -11699134 - MIR SINE MIR -71 191 23 2335 113 0 0 chr20 54969035 54969337 -11698668 + AluSx SINE Alu 1 302 -10 792 95 22 15 chr20 54969371 54969508 -11698497 + (TCCCC)n Simple_repeat Simple_repeat 2 139 0 261 369 41 20 chr20 54969538 54969733 -11698272 + MIR SINE MIR 12 210 -52 360 0 0 0 chr20 54969868 54969908 -11698097 + (CA)n Simple_repeat Simple_repeat 2 41 0 472 260 100 15 chr20 54970153 54970353 -11697652 + MER113 DNA MER1_type? 1 217 -304 1187 99 12 0 chr20 54970378 54970550 -11697455 - L1PA15 LINE L1 -5 6160 5987 2445 92 0 0 chr20 54970591 54970896 -11697109 + AluSx SINE Alu 1 305 -7 907 162 11 17 chr20 54971024 54971203 -11696802 - AluJo SINE Alu -14 298 121 183 191 24 0 chr20 54971215 54971257 -11696748 + MIR SINE MIR 103 145 -117 1982 138 24 3 chr20 54971269 54971559 -11696446 + AluJo SINE Alu 7 302 -10 208 217 133 12 chr20 54971686 54971769 -11696236 - MIR SINE MIR -130 132 40 674 288 68 0 chr20 54971888 54972107 -11695898 - MIR SINE MIR -13 249 16 2282 111 3 0 chr20 54972577 54972875 -11695130 - AluSx SINE Alu -13 299 1 269 219 27 14 chr20 54973018 54973091 -11694914 - MER46C DNA MER2_type 0 338 265 239 250 0 0 chr20 54973119 54973183 -11694822 - MER46C DNA MER2_type -146 192 129 936 154 30 120 chr20 54973428 54973662 -11694343 + MER20 DNA MER1_type 1 213 -6 24 77 0 0 chr20 54973702 54973754 -11694251 + AT_rich Low_complexity Low_complexity 1 52 0 633 265 83 48 chr20 54973806 54974157 -11693848 - L1ME4a LINE L1 -216 5905 5543 2318 94 0 3 chr20 54974215 54974513 -11693492 + AluSc SINE Alu 1 297 -12 699 236 96 0 chr20 54975289 54975467 -11692538 - MER58A DNA MER1_type -24 200 6 299 291 109 30 chr20 54975526 54975691 -11692314 + MIR SINE MIR 49 226 -36 653 235 102 68 chr20 54975877 54976230 -11691775 - LTR16A1 LTR ERVL -9 448 84 586 245 39 0 chr20 54976667 54976822 -11691183 + MIR SINE MIR 49 209 -53 393 136 86 0 chr20 54976928 54977009 -11690996 + MER113 DNA MER1_type? 2 89 -432 25 31 0 0 chr20 54978146 54978178 -11689827 + AT_rich Low_complexity Low_complexity 1 32 0 1141 272 18 48 chr20 54979086 54979171 -11688834 + MLT1K LTR MaLR 203 289 -299 501 17 0 0 chr20 54979171 54979229 -11688776 + (TG)n Simple_repeat Simple_repeat 2 59 0 1141 272 18 48 chr20 54979229 54979471 -11688534 + MLT1K LTR MaLR 289 519 -69 2459 77 0 0 chr20 54979471 54979771 -11688234 - AluY SINE Alu -11 300 1 1141 272 18 48 chr20 54979771 54979835 -11688170 + MLT1K LTR MaLR 519 583 -5 1903 155 0 26 chr20 54980777 54981086 -11686919 - AluJo SINE Alu -3 309 9 2353 96 3 0 chr20 54981417 54981710 -11686295 - AluSg SINE Alu -16 294 1 230 254 91 36 chr20 54981852 54981962 -11686043 + MIR3 SINE MIR 65 180 -28 367 238 0 12 chr20 54982364 54982448 -11685557 - L1M4 LINE L1 -1179 4967 4885 290 271 52 0 chr20 54982525 54982621 -11685384 - L2 LINE L2 -292 3021 2921 2194 114 13 10 chr20 54983184 54983483 -11684522 + AluSx SINE Alu 1 300 -12 703 256 33 29 chr20 54983581 54983823 -11684182 - L1MC4 LINE L1 -424 7618 7376 382 100 14 14 chr20 54983977 54984047 -11683958 + (CA)n Simple_repeat Simple_repeat 1 70 0 2325 87 7 7 chr20 54984082 54984382 -11683623 + AluSx SINE Alu 1 300 -12 408 300 47 18 chr20 54984568 54984738 -11683267 + MER5B DNA MER1_type 1 175 -3 191 195 0 24 chr20 54984811 54984852 -11683153 - MIR SINE MIR -2 260 221 1077 261 129 63 chr20 54984859 54985104 -11682901 + MLT1K LTR MaLR 1 229 -359 1229 172 75 97 chr20 54985104 54985259 -11682746 + AluJb SINE Alu 1 147 -165 2401 96 0 0 chr20 54985259 54985571 -11682434 + AluSx SINE Alu 1 312 0 1229 172 75 97 chr20 54985571 54985734 -11682271 + AluJb SINE Alu 147 312 0 1077 261 129 63 chr20 54985734 54986040 -11681965 + MLT1K LTR MaLR 229 588 0 195 265 61 0 chr20 54986137 54986186 -11681819 + MER5A DNA MER1_type 138 189 0 2094 132 0 28 chr20 54986241 54986560 -11681445 - AluSx SINE Alu -2 310 1 2333 100 3 3 chr20 54986574 54986885 -11681120 - AluSq SINE Alu -2 311 1 244 321 83 17 chr20 54987409 54987649 -11680356 - L2 LINE L2 -3 3310 3055 2777 77 6 0 chr20 54987673 54988026 -11679979 - THE1A LTR MaLR 0 355 1 180 293 66 38 chr20 54988379 54988485 -11679520 - L2 LINE L2 -568 2746 2638 348 260 0 0 chr20 54988487 54988560 -11679445 + MER81 DNA DNA 5 77 -37 343 310 21 0 chr20 54988582 54988724 -11679281 - L2 LINE L2 -666 2648 2504 2489 64 3 0 chr20 54989421 54989716 -11678289 + AluY SINE Alu 1 296 -15 261 0 0 0 chr20 54989723 54989752 -11678253 + (CA)n Simple_repeat Simple_repeat 2 30 0 263 284 0 0 chr20 54989757 54989845 -11678160 - L1MC4 LINE L1 -1339 6703 6616 315 319 8 17 chr20 54989853 54989972 -11678033 - L1MC4 LINE L1 -1339 6703 6586 388 182 45 4 chr20 54990278 54990546 -11677459 + (TCTA)n Simple_repeat Simple_repeat 1 279 0 868 95 9 0 chr20 54990564 54990680 -11677325 - FLAM_C SINE Alu -15 118 2 696 96 28 28 chr20 54990682 54990859 -11677146 + (TCTA)n Simple_repeat Simple_repeat 2 178 0 291 307 114 0 chr20 54990961 54991075 -11676930 + MER94 DNA DNA 1 127 -7 362 213 11 0 chr20 54991918 54992012 -11675993 + GA-rich Low_complexity Low_complexity 2 96 0 22 0 0 0 chr20 54992103 54992125 -11675880 + AT_rich Low_complexity Low_complexity 1 22 0 390 233 12 0 chr20 54992970 54993056 -11674949 + MER94 DNA DNA 29 115 -19 760 193 9 103 chr20 54993069 54993126 -11674879 + MER3 DNA MER1_type 1 62 -147 2118 117 0 0 chr20 54993126 54993437 -11674568 - AluSx SINE Alu 0 313 3 760 193 9 103 chr20 54993437 54993591 -11674414 + MER3 DNA MER1_type 62 193 -16 1581 55 40 5 chr20 54995289 54995488 -11672517 + AluSg/x SINE Alu 107 312 0 508 238 25 8 chr20 54995733 54995855 -11672150 - MLT1J LTR MaLR -292 219 96 2156 98 27 10 chr20 54995926 54996222 -11671783 + AluSx SINE Alu 1 301 -11 2403 84 0 3 chr20 54997124 54997423 -11670582 - AluSg SINE Alu -5 305 8 260 213 16 16 chr20 54997607 54997668 -11670337 + CT-rich Low_complexity Low_complexity 2 62 0 357 361 28 9 chr20 54997965 54998178 -11669827 + Charlie8 DNA MER1_type 3 219 -2198 1718 99 0 0 chr20 54998765 54998997 -11669008 + AluSg/x SINE Alu 79 310 0 204 179 0 0 chr20 54999062 54999101 -11668904 + CT-rich Low_complexity Low_complexity 3 41 0 2349 117 0 0 chr20 54999214 54999523 -11668482 + AluSx SINE Alu 1 309 -3 580 229 133 45 chr20 55000050 55000403 -11667602 + L1ME4a LINE L1 5727 6110 -11 460 335 27 5 chr20 55000856 55001041 -11666964 + MIR SINE MIR 8 196 -66 1662 176 10 26 chr20 55001164 55001492 -11666513 + AluJo SINE Alu 1 312 0 2226 98 10 3 chr20 55001526 55001821 -11666184 - AluSx SINE Alu -15 297 1 202 217 0 22 chr20 55002483 55002529 -11665476 - L2 LINE L2 -6 3307 3263 474 268 31 10 chr20 55003544 55003738 -11664267 + L2 LINE L2 2458 2655 -659 318 215 152 0 chr20 55003732 55003811 -11664194 - L2 LINE L2 -564 2750 2660 * 222 37 0 0 chr20 55003941 55003968 -11664037 + (CA)n Simple_repeat Simple_repeat 2 28 0 1678 112 0 0 chr20 55003970 55004184 -11663821 - AluSg/x SINE Alu -27 283 70 225 97 0 0 chr20 55004184 55004215 -11663790 - Alu SINE Alu -272 31 1 332 282 19 0 chr20 55004277 55004380 -11663625 + MER103 DNA DNA 14 118 -48 240 297 63 0 chr20 55004413 55004524 -11663481 + L2 LINE L2 2970 3087 -226 1663 156 4 25 chr20 55004823 55004959 -11663046 - AluSx SINE Alu -43 269 141 2196 104 10 13 chr20 55004959 55005132 -11662873 - AluSp SINE Alu -5 308 135 2333 67 40 0 chr20 55005132 55005430 -11662575 - AluY SINE Alu -1 310 1 2196 104 10 13 chr20 55005430 55005565 -11662440 - AluSp SINE Alu -178 135 1 1663 156 4 25 chr20 55005565 55005703 -11662302 - AluSx SINE Alu -171 141 1 413 275 12 17 chr20 55005723 55005910 -11662095 + L2 LINE L2 3137 3308 -5 2259 218 103 30 chr20 55005916 55006525 -11661480 - MLT1E1 LTR MaLR 0 654 1 296 272 0 0 chr20 55006772 55006853 -11661152 - Charlie8 DNA MER1_type -2263 154 74 928 322 103 8 chr20 55007431 55007967 -11660038 + L2 LINE L2 2712 3312 -1 2652 270 76 21 chr20 55008079 55009355 -11658650 - L1MEc LINE L1 -3008 3207 1857 2323 122 0 0 chr20 55009355 55009667 -11658338 - AluSx SINE Alu 0 312 1 2652 270 76 21 chr20 55009667 55009965 -11658040 - L1MEc LINE L1 -4358 1857 1577 258 206 0 0 chr20 55009972 55010035 -11657970 + T-rich Low_complexity Low_complexity 1 63 0 315 314 16 24 chr20 55010502 55010626 -11657379 - MIR SINE MIR -137 125 3 374 264 74 25 chr20 55010632 55010795 -11657210 + MER112 DNA MER1_type 1 171 -89 718 291 14 5 chr20 55011979 55012189 -11655816 - MIR SINE MIR -38 224 13 564 106 0 0 chr20 55012296 55012381 -11655624 + (TTCCC)n Simple_repeat Simple_repeat 4 88 0 466 244 191 85 chr20 55012422 55012746 -11655259 + LTR33A LTR ERVL 5 386 -137 630 46 0 23 chr20 55012746 55012833 -11655172 - L1PA6 LINE L1 0 6154 6070 466 244 191 85 chr20 55012833 55012931 -11655074 + LTR33A LTR ERVL 386 472 -51 1435 115 0 0 chr20 55012988 55013180 -11654825 - AluSq SINE Alu -12 301 110 1704 61 0 0 chr20 55013180 55013377 -11654628 - AluSq SINE Alu -116 197 1 537 309 27 43 chr20 55013394 55013839 -11654166 - LTR16C LTR ERVL -17 474 2 528 284 31 6 chr20 55014161 55014323 -11653682 - MIR SINE MIR -17 245 80 231 297 140 52 chr20 55014564 55014986 -11653019 + L2 LINE L2 2702 3150 -122 265 214 112 34 chr20 55015018 55015107 -11652898 + MIR SINE MIR 49 144 -118 994 207 5 0 chr20 55015253 55015441 -11652564 - MER5A DNA MER1_type 0 189 1 471 244 24 31 chr20 55015564 55015691 -11652314 - L2 LINE L2 0 3313 3188 235 200 12 94 chr20 55016092 55016177 -11651828 + MLT1L LTR MaLR 522 599 -16 396 276 77 6 chr20 55016190 55016346 -11651659 - MIR SINE MIR -3 259 93 207 125 0 0 chr20 55016856 55016896 -11651109 + (A)n Simple_repeat Simple_repeat 1 40 0 300 53 0 0 chr20 55018043 55018081 -11649924 + (TG)n Simple_repeat Simple_repeat 2 39 0 30 27 0 0 chr20 55018173 55018210 -11649795 + AT_rich Low_complexity Low_complexity 1 37 0 192 40 0 0 chr20 55018464 55018489 -11649516 + (CA)n Simple_repeat Simple_repeat 2 26 0 243 61 0 0 chr20 55018698 55018731 -11649274 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 186 233 0 0 chr20 55019565 55019625 -11648380 + (TA)n Simple_repeat Simple_repeat 2 61 0 404 217 100 22 chr20 55019728 55019971 -11648034 + LTR16A1 LTR ERVL 159 457 0 29 0 0 0 chr20 55020598 55020627 -11647378 + AT_rich Low_complexity Low_complexity 1 29 0 2175 113 7 0 chr20 55020963 55021256 -11646749 - AluSx SINE Alu -17 295 1 679 255 35 20 chr20 55021773 55021973 -11646032 + MIR SINE MIR 15 217 -45 1232 73 0 6 chr20 55022049 55022214 -11645791 - L1PA4 LINE L1 0 6155 5992 245 270 216 34 chr20 55022215 55022363 -11645642 + L2 LINE L2 3106 3280 -33 1689 197 3 7 chr20 55022421 55022721 -11645284 - AluJo SINE Alu -13 299 1 877 267 43 25 chr20 55022761 55023087 -11644918 - L1ME1 LINE L1 -12 6154 5823 207 170 21 21 chr20 55023134 55023181 -11644824 + (TA)n Simple_repeat Simple_repeat 1 47 0 502 174 43 16 chr20 55023186 55023496 -11644509 + (TATAG)n Simple_repeat Simple_repeat 1 318 0 386 200 38 70 chr20 55023510 55023695 -11644310 + (TATAG)n Simple_repeat Simple_repeat 2 180 0 612 263 110 19 chr20 55023740 55023949 -11644056 + MIR SINE MIR 35 262 0 185 287 11 69 chr20 55023979 55024066 -11643939 - L2 LINE L2 -5 3267 3186 266 342 112 0 chr20 55024547 55024708 -11643297 - MIR SINE MIR -37 225 47 577 275 13 39 chr20 55025013 55025246 -11642759 + Charlie8 DNA MER1_type 77 1390 -1027 269 188 0 58 chr20 55025368 55025437 -11642568 - MIR SINE MIR -88 174 110 250 310 57 59 chr20 55026554 55027093 -11640912 + L2 LINE L2 2536 3088 -225 216 257 68 14 chr20 55027301 55027375 -11640630 + L2 LINE L2 3182 3259 -54 509 218 34 0 chr20 55027377 55027585 -11640420 - MER58A DNA MER1_type 0 224 46 2391 78 7 0 chr20 55027838 55028134 -11639871 + AluSp SINE Alu 1 298 -15 326 243 197 17 chr20 55028192 55028341 -11639664 + MER5A DNA MER1_type 4 183 -6 240 163 0 0 chr20 55028614 55028657 -11639348 + GA-rich Low_complexity Low_complexity 2 44 0 273 320 47 16 chr20 55028865 55028993 -11639012 - L2 LINE L2 0 3272 3141 648 237 44 91 chr20 55029149 55029595 -11638410 + MER57A LTR ERV1 1 403 0 198 0 0 0 chr20 55029640 55029662 -11638343 + (TTCA)n Simple_repeat Simple_repeat 1 22 0 204 97 0 0 chr20 55029710 55029741 -11638264 + (ATG)n Simple_repeat Simple_repeat 2 32 0 349 256 134 12 chr20 55029754 55029926 -11638079 - MIR SINE MIR -19 243 51 874 284 89 29 chr20 55030575 55030942 -11637063 + MLT1K LTR MaLR 29 475 -113 375 23 0 0 chr20 55030942 55030986 -11637019 + (GA)n Simple_repeat Simple_repeat 1 44 0 874 284 89 29 chr20 55030986 55031087 -11636918 + MLT1K LTR MaLR 475 568 -20 610 246 66 40 chr20 55031459 55031687 -11636318 - Charlie8 DNA MER1_type -2153 264 31 372 271 113 11 chr20 55032177 55032354 -11635651 + MIR SINE MIR 13 207 -55 1319 219 35 60 chr20 55032774 55033140 -11634865 + MLT1A2 LTR MaLR 18 374 0 820 244 43 31 chr20 55033141 55033395 -11634610 - MIR SINE MIR -5 257 1 272 306 56 0 chr20 55033894 55033966 -11634039 + L2 LINE L2 3174 3249 -23 901 247 0 11 chr20 55034676 55034866 -11633139 + MER5A DNA MER1_type 2 189 0 427 303 83 26 chr20 55035322 55035550 -11632455 - MIR SINE MIR -20 242 2 1544 169 7 46 chr20 55035725 55035904 -11632101 - AluJb SINE Alu 0 312 148 2273 114 0 0 chr20 55035904 55036201 -11631804 - AluSx SINE Alu -15 297 1 1544 169 7 46 chr20 55036201 55036323 -11631682 - AluJb SINE Alu -164 148 23 243 0 0 0 chr20 55037117 55037144 -11630861 + (A)n Simple_repeat Simple_repeat 1 27 0 399 226 0 0 chr20 55037313 55037415 -11630590 + CT-rich Low_complexity Low_complexity 3 104 0 366 321 30 18 chr20 55038439 55038604 -11629401 + MIR SINE MIR 48 214 -48 2598 56 0 0 chr20 55039491 55039797 -11628208 - AluY SINE Alu -5 306 1 2175 120 10 0 chr20 55039847 55040148 -11627857 + AluSx SINE Alu 1 304 -8 369 214 143 10 chr20 55040647 55040745 -11627260 + L2 LINE L2 3203 3313 0 256 271 0 9 chr20 55040754 55040871 -11627134 + L1M4 LINE L1 5720 5795 -389 348 183 110 0 chr20 55040871 55040953 -11627052 - MER102a DNA MER1_type 0 330 240 198 0 0 0 chr20 55041923 55041945 -11626060 + (TTTTG)n Simple_repeat Simple_repeat 5 26 0 1306 242 86 34 chr20 55042330 55042597 -11625408 + MER113 DNA MER1_type? 2 306 -215 5148 92 3 7 chr20 55042597 55043284 -11624721 + L1PB2 LINE L1 5468 6151 0 1306 242 86 34 chr20 55043284 55043492 -11624513 + MER113 DNA MER1_type? 306 502 -19 547 274 41 66 chr20 55044588 55044672 -11623333 + MER58C DNA MER1_type 1 86 -2334 654 252 0 0 chr20 55044672 55044803 -11623202 - FLAM_A SINE Alu 0 133 3 547 274 41 66 chr20 55044803 55044915 -11623090 + MER58C DNA MER1_type 86 192 -23 256 286 185 35 chr20 55045708 55045935 -11622070 + MIR SINE MIR 2 262 0 21 0 0 0 chr20 55046064 55046085 -11621920 + AT_rich Low_complexity Low_complexity 1 21 0 553 278 179 5 chr20 55046234 55046446 -11621559 - MLT1L LTR MaLR -45 570 322 259 349 87 8 chr20 55046514 55046640 -11621365 - MLT1L LTR MaLR -384 231 96 254 155 84 70 chr20 55047688 55047759 -11620246 + MLT1L LTR MaLR 147 218 -397 631 300 22 74 chr20 55047825 55048148 -11619857 + MLT1I LTR MaLR 104 409 0 329 232 11 21 chr20 55048332 55048427 -11619578 + MLT1K LTR MaLR 491 584 -4 1162 169 152 0 chr20 55049131 55049368 -11618637 - MER58 DNA MER1_type -67 274 2 523 248 29 0 chr20 55049372 55049509 -11618496 - MIR SINE MIR -15 247 107 2280 104 0 13 chr20 55049594 55049910 -11618095 + AluSq SINE Alu 2 313 0 284 70 23 0 chr20 55050437 55050480 -11617525 + (GGAA)n Simple_repeat Simple_repeat 3 46 0 1799 60 0 219 chr20 55050504 55050874 -11617131 + LTR12 LTR ERV1 1 289 -425 347 207 11 0 chr20 55050874 55050961 -11617044 + LTR30 LTR ERV1 556 643 -79 790 69 0 0 chr20 55050962 55051063 -11616942 + LTR12 LTR ERV1 481 581 -133 21 57 0 0 chr20 55052249 55052284 -11615721 + AT_rich Low_complexity Low_complexity 1 35 0 365 307 80 20 chr20 55053138 55053288 -11614717 - MIR SINE MIR -43 219 61 2519 130 36 0 chr20 55053577 55053939 -11614066 - THE1C LTR MaLR 0 375 1 2483 11 0 0 chr20 55054536 55054800 -11613205 - L1PA3 LINE L1 0 6155 5892 870 39 0 0 chr20 55054800 55054903 -11613102 + L1HS LINE L1 5796 5898 -257 333 248 167 87 chr20 55054903 55055214 -11612791 + MER113 DNA MER1_type? 31 366 -155 351 298 40 33 chr20 55055515 55055666 -11612339 + MIR SINE MIR 79 230 -32 229 200 22 0 chr20 55056447 55056492 -11611513 + MIR SINE MIR 200 245 -17 376 331 83 29 chr20 55056788 55057030 -11610975 - L3 LINE CR1 -771 806 552 186 381 0 10 chr20 55057929 55058026 -11609979 - MER5A DNA MER1_type -59 130 35 383 333 51 13 chr20 55058202 55058358 -11609647 - MIR SINE MIR -71 191 30 237 65 0 0 chr20 55058460 55058491 -11609514 + (TG)n Simple_repeat Simple_repeat 2 32 0 398 288 141 12 chr20 55058630 55058793 -11609212 - MIR SINE MIR 0 262 79 281 297 22 11 chr20 55058843 55058934 -11609071 - MIR3 SINE MIR -43 165 74 24 0 0 0 chr20 55059040 55059064 -11608941 + AT_rich Low_complexity Low_complexity 1 24 0 189 346 192 0 chr20 55059398 55059476 -11608529 + L2 LINE L2 3183 3275 -38 365 286 36 65 chr20 55059943 55060111 -11607894 - MIR SINE MIR -14 248 86 327 206 44 0 chr20 55060145 55060213 -11607792 + MER113 DNA MER1_type? 1 71 -450 910 285 48 24 chr20 55060290 55060627 -11607378 + LTR16B LTR ERVL 117 461 -3 363 203 17 51 chr20 55062460 55062578 -11605427 - Charlie7 DNA MER1_type 0 2612 2499 250 254 18 0 chr20 55062819 55062929 -11605076 + CT-rich Low_complexity Low_complexity 2 113 0 1889 134 28 3 chr20 55063262 55063545 -11604460 + AluJb SINE Alu 1 290 -22 285 315 158 8 chr20 55063591 55063718 -11604287 - MIR3 SINE MIR -27 181 36 236 242 45 15 chr20 55064201 55064267 -11603738 - L2 LINE L2 -4 3268 3201 341 344 32 0 chr20 55064413 55064538 -11603467 - L2 LINE L2 -214 3058 2930 532 301 35 35 chr20 55065090 55065150 -11602855 - MIR SINE MIR -33 229 170 1249 159 4 33 chr20 55065150 55065395 -11602610 - L1MA4 LINE L1 -1 6299 6062 532 301 35 35 chr20 55065395 55065563 -11602442 - MIR SINE MIR -91 171 1 656 221 33 75 chr20 55065630 55065870 -11602135 + MER106A DNA MER1_type 5 234 -2 918 169 10 70 chr20 55066431 55066632 -11601373 + MER53 DNA DNA 1 189 0 1343 249 103 13 chr20 55068440 55068917 -11599088 - MER113 DNA MER1_type? -1 520 1 263 364 101 16 chr20 55070651 55070780 -11597225 - MIR3 SINE MIR -62 146 7 261 0 0 0 chr20 55071536 55071565 -11596440 + (CA)n Simple_repeat Simple_repeat 2 30 0 393 255 170 24 chr20 55071899 55072111 -11595894 - MARNA DNA Mariner -51 535 293 288 77 0 0 chr20 55073109 55073148 -11594857 + (A)n Simple_repeat Simple_repeat 1 39 0 457 324 152 24 chr20 55073261 55073948 -11594057 + L2 LINE L2 2538 3300 -13 346 269 42 77 chr20 55074047 55074307 -11593698 - L1MC4a LINE L1 -1976 5832 5582 2372 171 28 19 chr20 55074918 55075340 -11592665 - MSTB LTR MaLR 0 426 1 26 30 0 0 chr20 55075418 55075451 -11592554 + AT_rich Low_complexity Low_complexity 1 33 0 507 299 41 20 chr20 55075469 55075666 -11592339 - MIR SINE MIR -16 246 46 307 194 30 15 chr20 55076020 55076087 -11591918 - MIR SINE MIR -124 138 71 499 320 68 40 chr20 55076187 55076380 -11591625 + L2 LINE L2 2820 3027 -286 2218 112 3 0 chr20 55076380 55076674 -11591331 - AluSx SINE Alu -14 298 4 499 320 68 40 chr20 55076674 55076805 -11591200 + L2 LINE L2 3027 3153 -160 626 203 82 32 chr20 55076817 55076975 -11591030 + MER20 DNA MER1_type 30 195 -24 250 242 180 8 chr20 55077009 55077137 -11590868 + L2 LINE L2 3163 3312 -1 3816 235 72 38 chr20 55077172 55077813 -11590192 - L1MEc LINE L1 -5080 1316 698 2911 192 54 71 chr20 55077813 55078516 -11589489 + LTR8 LTR ERV1 1 691 0 3816 235 72 38 chr20 55078516 55079106 -11588899 - L1MEc LINE L1 -5698 698 43 401 263 53 35 chr20 55079188 55079359 -11588646 + Charlie7 DNA MER1_type 515 688 -1924 228 340 69 56 chr20 55079514 55079658 -11588347 + L2 LINE L2 3087 3232 -40 415 328 48 11 chr20 55079675 55079864 -11588141 + MIR SINE MIR 59 254 -8 180 0 0 0 chr20 55079874 55079894 -11588111 + (A)n Simple_repeat Simple_repeat 1 20 0 1892 181 28 14 chr20 55080696 55081056 -11586949 + MLT1A1 LTR MaLR 1 365 0 704 282 41 5 chr20 55081451 55081671 -11586334 + MIR SINE MIR 35 262 0 1890 159 38 0 chr20 55081821 55081941 -11586064 + AluJo SINE Alu 1 115 -197 305 45 0 23 chr20 55081941 55081985 -11586020 + (CAAAA)n Simple_repeat Simple_repeat 3 45 0 1890 159 38 0 chr20 55081985 55082154 -11585851 + AluJo SINE Alu 115 301 -11 805 220 23 17 chr20 55082175 55082352 -11585653 + MER5B DNA MER1_type 1 178 0 2403 93 0 0 chr20 55083075 55083375 -11584630 + AluSx SINE Alu 1 300 -12 208 277 137 72 chr20 55083449 55083698 -11584307 - L2 LINE L2 -15 3298 3034 3569 224 75 41 chr20 55084393 55085456 -11582549 + L1MD1 LINE L1 1 1195 -5345 2234 99 3 26 chr20 55085456 55085760 -11582245 - AluSx SINE Alu -15 297 1 3569 224 75 41 chr20 55085760 55085981 -11582024 + L1MD1 LINE L1 1195 1407 -5133 6129 222 23 40 chr20 55086071 55088370 -11579635 + L1MD1 LINE L1 3734 6003 -633 758 179 80 19 chr20 55088371 55088533 -11579472 + AluSg/x SINE Alu 137 308 -4 2213 201 89 12 chr20 55088533 55089115 -11578890 + L1MD1 LINE L1 5998 6624 -12 770 258 68 23 chr20 55089344 55089565 -11578440 - MIR SINE MIR -30 232 2 192 328 0 0 chr20 55089568 55089626 -11578379 + L2 LINE L2 2995 3052 -261 1020 282 66 18 chr20 55090061 55090575 -11577430 + L1MC4a LINE L1 5466 6004 -1804 2179 83 50 0 chr20 55091697 55091975 -11576030 - AluSx SINE Alu -16 296 5 405 303 93 69 chr20 55092553 55092972 -11575033 - L1ME4a LINE L1 -44 6077 5643 914 201 46 0 chr20 55092972 55093191 -11574814 - L1MA4 LINE L1 -5 6295 6067 405 303 93 69 chr20 55093191 55093266 -11574739 - L1ME4a LINE L1 -478 5643 5571 2361 116 0 0 chr20 55094033 55094343 -11573662 - AluSx SINE Alu -2 310 1 193 0 94 0 chr20 55094539 55094571 -11573434 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 284 279 186 16 chr20 55094904 55095033 -11572972 + L2 LINE L2 3163 3313 0 228 56 0 0 chr20 55095049 55095085 -11572920 - AluY SINE Alu -2 298 263 1730 45 0 0 chr20 55095085 55095283 -11572722 - AluY SINE Alu -113 198 1 296 330 11 0 chr20 55095683 55095777 -11572228 - Charlie8 DNA MER1_type -2322 95 1 549 217 0 0 chr20 55095913 55096033 -11571972 + MER103 DNA DNA 1 120 -46 2099 185 44 69 chr20 55096142 55096705 -11571300 + MLT2B3 LTR ERVL 6 554 0 307 257 152 9 chr20 55096774 55096879 -11571126 + MIR SINE MIR 5 124 -138 377 237 32 21 chr20 55097239 55097332 -11570673 - L2 LINE L2 -5 3267 3174 462 285 78 12 chr20 55097371 55097613 -11570392 - MER112 DNA MER1_type -2 258 1 970 157 49 0 chr20 55097896 55098081 -11569924 - Tigger1 DNA MER2_type -4 2414 2221 781 46 9 9 chr20 55098085 55098194 -11569811 - L1PA10 LINE L1 -372 5796 5688 2540 74 18 64 chr20 55098194 55098572 -11569433 + L1PA10 LINE L1 5794 6168 0 764 168 7 7 chr20 55098586 55098723 -11569282 - Tigger1 DNA MER2_type -2261 157 21 256 252 65 47 chr20 55098841 55098933 -11569072 + MLT1L LTR MaLR 489 585 -30 189 0 0 0 chr20 55098933 55098954 -11569051 + (TG)n Simple_repeat Simple_repeat 2 22 0 256 252 65 47 chr20 55098954 55098968 -11569037 + MLT1L LTR MaLR 585 597 -18 543 277 76 25 chr20 55099199 55099437 -11568568 + MIR SINE MIR 13 262 0 231 239 8 21 chr20 55099452 55099533 -11568472 - MIR SINE MIR -120 88 8 368 328 126 6 chr20 55099929 55100103 -11567902 + MIR SINE MIR 18 212 -50 815 243 5 55 chr20 55100664 55100882 -11567123 - MIR SINE MIR -44 218 12 206 204 0 45 chr20 55100898 55100942 -11567063 + MIR SINE MIR 36 77 -131 972 241 138 98 chr20 55100953 55101563 -11566442 - L2 LINE L2 -886 2428 1795 282 360 54 25 chr20 55103432 55103671 -11564334 + L2 LINE L2 3007 3252 -20 233 309 0 0 chr20 55103997 55104065 -11563940 + MIR SINE MIR 183 250 -12 1069 193 38 5 chr20 55105994 55106206 -11561799 - MER20 DNA MER1_type 0 219 1 475 260 75 7 chr20 55106228 55106374 -11561631 + MIR SINE MIR 96 251 -11 311 261 60 67 chr20 55106381 55106515 -11561490 - MIR SINE MIR -109 153 21 542 322 56 0 chr20 55106840 55107065 -11560940 + MIR SINE MIR 16 250 -12 183 80 0 0 chr20 55107243 55107268 -11560737 + (CA)n Simple_repeat Simple_repeat 2 26 0 393 316 71 16 chr20 55108089 55108408 -11559597 + MLT1K LTR MaLR 145 547 -41 15795 182 64 1 chr20 55108490 55111777 -11556228 + L1PA13 LINE L1 1494 4985 -1161 2317 65 41 3 chr20 55111778 55112071 -11555934 + AluY SINE Alu 1 304 -7 5196 81 10 36 chr20 55112071 55112894 -11555111 + L1PA13 LINE L1 5359 6159 -4 655 302 44 20 chr20 55113129 55113377 -11554628 + MIR SINE MIR 9 262 0 2164 141 21 21 chr20 55113747 55114122 -11553883 - THE1C LTR MaLR 0 375 1 190 93 23 23 chr20 55114195 55114238 -11553767 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 620 307 11 17 chr20 55114265 55114444 -11553561 - MIR SINE MIR -71 191 14 237 294 55 37 chr20 55114624 55114733 -11553272 + L2 LINE L2 2699 2809 -505 462 344 136 6 chr20 55114768 55115099 -11552906 + L2 LINE L2 2901 3274 -39 351 285 46 42 chr20 55116660 55116944 -11551061 - L1ME LINE L1 -307 5814 5530 3711 184 37 1 chr20 55117196 55117988 -11550017 + L1MB7 LINE L1 5346 6165 -19 611 300 39 62 chr20 55118047 55118248 -11549757 + L1ME LINE L1 5319 5523 -598 2043 108 16 35 chr20 55118248 55118369 -11549636 + AluSq SINE Alu 1 123 -190 189 0 0 0 chr20 55118369 55118390 -11549615 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 2043 108 16 35 chr20 55118390 55118582 -11549423 + AluSq SINE Alu 123 308 -5 611 300 39 62 chr20 55118582 55118846 -11549159 + L1ME LINE L1 5523 5771 -350 1148 130 53 0 chr20 55118846 55119054 -11548951 + L1PA13 LINE L1 5942 6160 -3 611 300 39 62 chr20 55119054 55119101 -11548904 + L1ME LINE L1 5771 5818 -303 339 25 0 0 chr20 55119945 55119985 -11548020 + (ATG)n Simple_repeat Simple_repeat 2 41 0 648 174 37 58 chr20 55120285 55120475 -11547530 - MER5A DNA MER1_type -3 186 1 2329 108 0 0 chr20 55121203 55121508 -11546497 + AluSx SINE Alu 1 305 -7 1831 166 7 7 chr20 55121580 55121888 -11546117 + AluJo SINE Alu 5 312 0 345 291 40 40 chr20 55121909 55122084 -11545921 + L1MC4a LINE L1 5712 5886 -1922 530 324 52 15 chr20 55122224 55122551 -11545454 + MER93a LTR ERV1 61 399 -3 207 259 0 0 chr20 55122703 55122761 -11545244 + (TATG)n Simple_repeat Simple_repeat 3 60 0 501 199 29 79 chr20 55122799 55122895 -11545110 - MLT1G LTR MaLR 0 530 431 2324 95 0 3 chr20 55122895 55123199 -11544806 + AluSg SINE Alu 1 303 -7 501 199 29 79 chr20 55123199 55123210 -11544795 - MLT1G LTR MaLR -99 431 421 2154 127 3 3 chr20 55123210 55123509 -11544496 + AluSx SINE Alu 2 300 -12 501 199 29 79 chr20 55123509 55123607 -11544398 - MLT1G LTR MaLR -109 421 357 548 224 71 63 chr20 55123687 55124030 -11543975 - MLT1G LTR MaLR -188 374 29 1809 113 71 13 chr20 55124321 55124632 -11543373 - MER51B LTR ERV1 0 377 49 470 130 141 11 chr20 55124644 55124736 -11543269 - MER51A LTR ERV1 -530 104 1 305 225 59 79 chr20 55125035 55125259 -11542746 + MLT1L LTR MaLR 111 390 -225 218 313 55 31 chr20 55125475 55125603 -11542402 - L2 LINE L2 -5 3267 3137 883 112 15 22 chr20 55126219 55126353 -11541652 - FLAM_C SINE Alu 0 133 1 374 195 195 31 chr20 55126434 55126562 -11541443 - MIR SINE MIR -91 171 23 1331 199 29 55 chr20 55126665 55127011 -11540994 - MLT1D LTR MaLR -148 357 21 344 212 126 19 chr20 55127104 55127254 -11540751 + MER106B DNA MER1_type 2 985 -74 2134 108 0 10 chr20 55128362 55128686 -11539319 - AluSx SINE Alu 0 312 1 1797 211 12 19 chr20 55128752 55129116 -11538889 - L1ME1 LINE L1 -8 6158 5796 1528 168 18 106 chr20 55129116 55129514 -11538491 + MLT1A1 LTR MaLR 1 363 -2 1797 211 12 19 chr20 55129514 55129571 -11538434 - L1ME1 LINE L1 -370 5796 5740 566 272 99 35 chr20 55130267 55130499 -11537506 - MIR SINE MIR -10 252 6 2835 88 0 0 chr20 55130547 55130910 -11537095 - THE1B LTR MaLR -1 363 1 200 139 0 23 chr20 55131506 55131549 -11536456 + (TA)n Simple_repeat Simple_repeat 2 43 0 240 234 18 63 chr20 55131554 55131665 -11536340 + (CATATA)n Simple_repeat Simple_repeat 2 107 0 2656 143 51 82 chr20 55131839 55131913 -11536092 + L1MA9 LINE L1 5542 5617 -695 2367 110 8 11 chr20 55131913 55132269 -11535736 - THE1A LTR MaLR 0 355 1 2656 143 51 82 chr20 55132269 55132863 -11535142 + L1MA9 LINE L1 5617 6189 -123 2152 139 19 6 chr20 55132864 55132880 -11535125 + L1PB3 LINE L1 5777 5791 -363 195 42 0 0 chr20 55132880 55132904 -11535101 + (CA)n Simple_repeat Simple_repeat 2 25 0 2152 139 19 6 chr20 55132904 55133247 -11534758 + L1PB3 LINE L1 5791 6141 -13 254 350 14 42 chr20 55133262 55133405 -11534600 - MER5B DNA MER1_type -29 149 11 181 289 0 0 chr20 55133405 55133450 -11534555 - MIR3 SINE MIR -51 157 113 817 227 159 0 chr20 55133499 55133706 -11534299 - MIR SINE MIR -20 242 3 239 271 0 0 chr20 55133898 55133957 -11534048 + L1MC1 LINE L1 6212 6270 -63 723 263 63 0 chr20 55133960 55134150 -11533855 - MIR SINE MIR -42 220 19 1392 161 59 80 chr20 55134225 55134590 -11533415 + MLT1B LTR MaLR 1 333 -32 186 43 0 0 chr20 55135238 55135261 -11532744 + (T)n Simple_repeat Simple_repeat 1 23 0 1930 132 64 14 chr20 55135504 55135861 -11532144 - THE1C LTR MaLR 0 375 1 364 261 19 56 chr20 55136204 55136225 -11531780 - L2 LINE L2 -1 3312 3292 1599 211 75 0 chr20 55136225 55136547 -11531458 - MER7A DNA MER2_type -2 344 1 364 261 19 56 chr20 55136547 55136686 -11531319 - L2 LINE L2 -21 3292 3158 675 218 232 5 chr20 55136718 55136929 -11531076 + MIR SINE MIR 2 260 -2 2092 113 0 30 chr20 55136969 55137269 -11530736 - AluSx SINE Alu -21 291 1 207 322 13 40 chr20 55137403 55137552 -11530453 + L2 LINE L2 3169 3313 0 515 284 120 18 chr20 55137667 55137892 -11530113 - MIR SINE MIR -1 261 14 1692 194 31 0 chr20 55138520 55138840 -11529165 + MER58B DNA MER1_type 4 333 -8 460 294 34 17 chr20 55138910 55139087 -11528918 - MIR SINE MIR 0 262 83 567 225 21 7 chr20 55139875 55140017 -11527988 + MIR SINE MIR 89 232 -30 219 245 0 0 chr20 55140174 55140223 -11527782 - MER5A DNA MER1_type -105 84 36 336 283 40 0 chr20 55140251 55140350 -11527655 + MER81 DNA DNA 4 106 -8 201 244 0 0 chr20 55140368 55140413 -11527592 - MIR SINE MIR -115 147 103 371 298 35 0 chr20 55140774 55140915 -11527090 + MER5B DNA MER1_type 9 154 -24 494 231 69 6 chr20 55141446 55141606 -11526399 - MIR SINE MIR 0 262 93 268 200 0 0 chr20 55141702 55141747 -11526258 + Tigger5 DNA MER2_type 10 54 -2269 606 12 24 12 chr20 55141749 55141833 -11526172 + (TCTA)n Simple_repeat Simple_repeat 2 86 0 611 250 13 53 chr20 55142027 55142255 -11525750 + MER20 DNA MER1_type 1 219 0 602 269 15 69 chr20 55142610 55142716 -11525289 - MIR SINE MIR 0 262 152 2608 46 0 0 chr20 55142716 55143019 -11524986 - AluY SINE Alu -8 303 1 602 269 15 69 chr20 55143019 55143098 -11524907 - MIR SINE MIR -110 152 92 1366 218 23 54 chr20 55143098 55143484 -11524521 + MLT1A2 LTR MaLR 1 374 0 602 269 15 69 chr20 55143484 55143557 -11524448 - MIR SINE MIR -170 92 17 2150 117 7 3 chr20 55143740 55144039 -11523966 + AluSx SINE Alu 1 300 -12 333 316 110 0 chr20 55144698 55144834 -11523171 + MER91A DNA MER1_type 1 151 -45 343 191 131 0 chr20 55145086 55145170 -11522835 + MER96B DNA MER1_type? 81 175 0 399 248 9 9 chr20 55145862 55145975 -11522030 - MER96B DNA MER1_type? -13 404 292 787 217 5 26 chr20 55145976 55146165 -11521840 + MER96B DNA MER1_type? 231 415 -2 418 297 12 12 chr20 55146340 55146505 -11521500 - MIR SINE MIR -88 174 10 316 289 94 40 chr20 55146857 55147006 -11520999 - MIR SINE MIR -71 191 35 206 339 17 42 chr20 55148495 55148613 -11519392 + MIR SINE MIR 22 136 -126 2240 121 0 0 chr20 55148741 55149039 -11518966 - AluSx SINE Alu -10 302 5 4157 232 42 9 chr20 55149940 55150837 -11517168 - MER45B DNA AcHobo -541 1040 109 2233 131 8 122 chr20 55150837 55151327 -11516678 + Tigger2a DNA MER2_type 1 434 0 4157 232 42 9 chr20 55151327 55151381 -11516624 - MER45B DNA AcHobo -1472 109 58 717 320 13 0 chr20 55152143 55152374 -11515631 + MIR SINE MIR 15 248 -14 245 313 25 12 chr20 55152371 55152451 -11515554 - MIR SINE MIR -170 92 12 * 319 309 74 25 chr20 55152923 55153166 -11514839 + MIR SINE MIR 8 262 0 1906 84 0 0 chr20 55153264 55153491 -11514514 - AluSc SINE Alu -19 290 64 302 255 51 20 chr20 55153630 55153728 -11514277 + MIR SINE MIR 47 147 -115 940 196 48 0 chr20 55153891 55154100 -11513905 - MER20 DNA MER1_type 0 219 1 1810 173 37 0 chr20 55154441 55154794 -11513211 + L1MB3 LINE L1 5816 6181 -2 366 163 12 25 chr20 55154799 55154879 -11513126 + MER53 DNA DNA 35 113 -76 * 513 130 14 130 chr20 55154877 55155015 -11512990 - MER53 DNA DNA -67 122 1 493 314 51 5 chr20 55155077 55155295 -11512710 - MLT1L LTR MaLR -10 605 277 415 266 37 53 chr20 55155389 55155575 -11512430 - MLT1L LTR MaLR -285 330 148 1011 160 33 17 chr20 55155575 55155756 -11512249 - MER58A DNA MER1_type 0 224 41 439 205 126 46 chr20 55155812 55155963 -11512042 + MIR SINE MIR 20 182 -80 2283 76 40 7 chr20 55156053 55156354 -11511651 + AluSx SINE Alu 1 311 -1 2266 154 51 67 chr20 55156364 55156917 -11511088 + Charlie1 DNA MER1_type 2217 2760 -1 298 294 0 20 chr20 55157218 55157320 -11510685 - L1ME LINE L1 -448 5673 5574 216 97 0 0 chr20 55157392 55157423 -11510582 + (TGGA)n Simple_repeat Simple_repeat 4 34 0 1879 155 0 23 chr20 55157811 55158120 -11509885 - AluJo SINE Alu -10 302 1 354 312 89 56 chr20 55158120 55158389 -11509616 + Charlie8 DNA MER1_type 81 358 -2059 29 28 0 0 chr20 55158494 55158530 -11509475 + AT_rich Low_complexity Low_complexity 1 36 0 1109 169 0 26 chr20 55158649 55158844 -11509161 + AluJo SINE Alu 98 287 -25 229 179 0 0 chr20 55158892 55158931 -11509074 + Charlie8 DNA MER1_type 1379 1417 -1000 870 227 93 85 chr20 55159246 55159555 -11508450 + MER113 DNA MER1_type? 1 317 -204 2379 94 0 7 chr20 55159555 55159864 -11508141 + AluSg SINE Alu 2 308 -2 870 227 93 85 chr20 55159864 55160070 -11507935 + MER113 DNA MER1_type? 317 520 -1 328 274 59 0 chr20 55160254 55160356 -11507649 - MIR SINE MIR -116 146 39 289 340 0 0 chr20 55160821 55160921 -11507084 + (TCCA)n Simple_repeat Simple_repeat 1 100 0 881 167 11 0 chr20 55160932 55161199 -11506806 + (TCCA)n Simple_repeat Simple_repeat 1 270 0 312 358 28 83 chr20 55161203 55161563 -11506442 - L2 LINE L2 -5 3267 2928 623 206 91 12 chr20 55162242 55162407 -11505598 + MIR SINE MIR 80 257 -5 529 287 39 30 chr20 55162432 55162449 -11505556 + MIR SINE MIR 4 19 -243 1033 39 86 0 chr20 55162449 55162577 -11505428 - MER85 DNA T2_type 0 139 1 529 287 39 30 chr20 55162577 55162789 -11505216 + MIR SINE MIR 19 235 -27 429 354 27 14 chr20 55163142 55163365 -11504640 + MIR SINE MIR 25 250 -12 2105 89 53 0 chr20 55164003 55164285 -11503720 - AluSc SINE Alu -12 297 1 421 309 27 58 chr20 55164347 55164535 -11503470 - LTR33 LTR ERVL -337 184 3 202 352 64 16 chr20 55165627 55165752 -11502253 + L2 LINE L2 3134 3264 -8 2425 150 23 77 chr20 55165870 55166351 -11501654 + LTR32 LTR ERVL 17 471 0 755 298 94 46 chr20 55166505 55166921 -11501084 - MLT1L LTR MaLR 0 615 180 1645 167 49 3 chr20 55167722 55168010 -11499995 + AluJb SINE Alu 1 301 -11 212 257 115 9 chr20 55168020 55168133 -11499872 + MIR SINE MIR 137 261 -1 282 138 23 46 chr20 55168519 55168606 -11499399 + (TCTA)n Simple_repeat Simple_repeat 2 86 0 195 114 0 0 chr20 55168804 55168839 -11499166 + (CTATT)n Simple_repeat Simple_repeat 3 37 0 180 219 24 0 chr20 55169146 55169187 -11498818 - MER5B DNA MER1_type 0 178 137 1609 231 78 36 chr20 55169244 55169297 -11498708 - L1M4 LINE L1 -3857 2525 2476 2151 108 0 21 chr20 55169297 55169607 -11498398 + AluSx SINE Alu 1 304 0 1609 231 78 36 chr20 55169607 55170108 -11497897 - L1M4 LINE L1 -3906 2476 1950 232 204 0 19 chr20 55170125 55170179 -11497826 + MER5B DNA MER1_type 122 174 -4 222 344 16 16 chr20 55171272 55171366 -11496639 - MIR SINE MIR -65 197 101 786 52 191 0 chr20 55171366 55171481 -11496524 + MER85 DNA T2_type 1 137 -2 222 344 16 16 chr20 55171481 55171514 -11496491 - MIR SINE MIR -160 102 70 189 0 0 0 chr20 55171678 55171699 -11496306 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1434 63 0 11 chr20 55171710 55171900 -11496105 - L1PA5 LINE L1 -1 6153 5966 246 218 92 11 chr20 55171999 55172086 -11495919 - MER113 DNA MER1_type? -409 112 19 2357 106 0 3 chr20 55172124 55172435 -11495570 + AluSq SINE Alu 1 310 -3 454 234 38 7 chr20 55172633 55172778 -11495227 + MIR3 SINE MIR 46 201 -7 280 221 14 172 chr20 55172851 55172933 -11495072 + MIR SINE MIR 7 58 -204 2265 103 3 10 chr20 55172933 55173243 -11494762 - AluSg SINE Alu -2 308 1 280 221 14 172 chr20 55173243 55173305 -11494700 + MIR SINE MIR 58 128 -134 517 238 107 12 chr20 55173754 55173922 -11494083 + MER5A DNA MER1_type 6 189 0 197 295 32 11 chr20 55173994 55174089 -11493916 + MER5A DNA MER1_type 14 110 -79 263 293 12 12 chr20 55174137 55174219 -11493786 + CT-rich Low_complexity Low_complexity 1 82 0 1814 159 7 0 chr20 55174312 55174601 -11493404 + AluJb SINE Alu 22 312 0 490 207 233 7 chr20 55174900 55175050 -11492955 + MER5A DNA MER1_type 1 184 -5 225 277 31 82 chr20 55175064 55175223 -11492782 + MLT1L LTR MaLR 2 152 -463 482 241 108 0 chr20 55175742 55175900 -11492105 + MLT1L LTR MaLR 188 362 -253 226 271 47 0 chr20 55175982 55176067 -11491938 + MLT1L LTR MaLR 495 583 -32 1734 152 43 17 chr20 55176688 55176989 -11491016 - Tigger3b DNA MER2_type 0 1231 923 2589 97 8 27 chr20 55176989 55177360 -11490645 - THE1B LTR MaLR 0 364 1 * 3842 119 39 17 chr20 55177360 55178001 -11490004 - Tigger3b DNA MER2_type -304 927 273 492 196 62 0 chr20 55177997 55178094 -11489911 - Tigger3b DNA MER2_type -1128 103 1 * 219 114 0 0 chr20 55178264 55178299 -11489706 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2037 145 0 0 chr20 55178301 55178583 -11489422 - AluSx SINE Alu -29 283 2 441 327 47 32 chr20 55178886 55179164 -11488841 - L2 LINE L2 -227 3086 2805 258 225 72 36 chr20 55179512 55179623 -11488382 - MER103 DNA DNA -20 146 32 280 129 14 14 chr20 55179847 55179917 -11488088 + (TTAA)n Simple_repeat Simple_repeat 3 72 0 1426 221 32 10 chr20 55179966 55180326 -11487679 - MLT1E3 LTR MaLR 0 610 222 1916 168 55 16 chr20 55180346 55180727 -11487278 - L1MA5 LINE L1 -2 6298 5903 211 289 0 0 chr20 55181158 55181210 -11486795 - L2 LINE L2 -11 3261 3210 * 280 309 53 0 chr20 55181208 55181302 -11486703 - MIR SINE MIR -118 144 46 198 111 0 28 chr20 55182010 55182046 -11485959 + MIR SINE MIR 112 146 -62 346 246 42 34 chr20 55182149 55182267 -11485738 + MER103 DNA DNA 38 156 -10 26 30 0 0 chr20 55182732 55182765 -11485240 + AT_rich Low_complexity Low_complexity 1 33 0 252 265 146 26 chr20 55182804 55182955 -11485050 - MIR SINE MIR -15 247 79 285 315 107 30 chr20 55182966 55183059 -11484946 + MIR SINE MIR 51 135 -127 197 62 0 31 chr20 55183059 55183091 -11484914 + (TAA)n Simple_repeat Simple_repeat 2 32 0 285 315 107 30 chr20 55183091 55183194 -11484811 + MIR SINE MIR 135 262 0 26 0 0 0 chr20 55183266 55183292 -11484713 + AT_rich Low_complexity Low_complexity 1 26 0 323 317 92 21 chr20 55183484 55183724 -11484281 + L1ME LINE L1 5521 5777 -393 231 36 0 0 chr20 55184979 55185007 -11482998 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 2846 149 7 75 chr20 55185007 55185424 -11482581 - L1MB1 LINE L1 -10 6158 5791 249 33 0 0 chr20 55185424 55185454 -11482551 + (TA)n Simple_repeat Simple_repeat 2 31 0 2846 149 7 75 chr20 55185454 55185619 -11482386 - L1MB1 LINE L1 -377 5791 5616 1465 173 116 8 chr20 55185623 55186099 -11481906 + L1MB1 LINE L1 5123 5647 -665 378 0 0 0 chr20 55186123 55186165 -11481840 + (CA)n Simple_repeat Simple_repeat 1 42 0 25 0 0 0 chr20 55186504 55186529 -11481476 + AT_rich Low_complexity Low_complexity 1 25 0 419 318 31 16 chr20 55187207 55187336 -11480669 - L2 LINE L2 0 3272 3142 699 267 5 16 chr20 55187417 55187608 -11480397 - MER5A DNA MER1_type 0 189 1 983 76 0 0 chr20 55187633 55187752 -11480253 + AluSx SINE Alu 1 119 -194 1312 124 0 0 chr20 55187942 55188127 -11479878 + AluSx SINE Alu 120 304 -8 2109 154 38 22 chr20 55188129 55188498 -11479507 - THE1C LTR MaLR 0 375 1 288 330 11 11 chr20 55188498 55188589 -11479416 - L2 LINE L2 -224 3048 2958 468 244 65 8 chr20 55188591 55188714 -11479291 + MER5C DNA MER1_type 1 130 -194 1854 241 43 72 chr20 55189535 55190260 -11477745 - L1MC4 LINE L1 -1 8041 7338 222 271 20 99 chr20 55190429 55190580 -11477425 - L2 LINE L2 -96 3217 3079 438 315 78 42 chr20 55190592 55190976 -11477029 - L2 LINE L2 -86 3227 2830 449 136 71 71 chr20 55190979 55191148 -11476857 + (GAGTG)n Simple_repeat Simple_repeat 3 171 0 323 256 91 61 chr20 55191148 55191378 -11476627 - L2 LINE L2 -429 2885 2649 211 311 97 29 chr20 55191611 55191714 -11476291 + L2 LINE L2 3202 3311 -2 590 300 108 30 chr20 55191772 55192246 -11475759 + MLT2F LTR ERVL 4 514 -149 405 0 0 0 chr20 55192728 55192773 -11475232 + (CA)n Simple_repeat Simple_repeat 2 46 0 1936 139 4 0 chr20 55192906 55193207 -11474798 + AluSx SINE Alu 1 302 0 222 400 120 5 chr20 55193270 55193470 -11474535 + MIR SINE MIR 12 234 -28 506 213 94 8 chr20 55193487 55193614 -11474391 + MIR SINE MIR 60 197 -65 784 217 47 42 chr20 55193636 55193823 -11474182 + MIR SINE MIR 48 238 -24 427 39 0 0 chr20 55193823 55193875 -11474130 + L1PA6 LINE L1 6102 6153 -1 784 217 47 42 chr20 55193875 55193899 -11474106 + MIR SINE MIR 238 260 -2 1283 109 16 0 chr20 55194129 55194313 -11473692 - AluSg/x SINE Alu -1 311 125 647 161 115 0 chr20 55194496 55194626 -11473379 + L1MA9 LINE L1 6167 6311 -1 970 187 55 55 chr20 55195076 55195295 -11472710 + MER20 DNA MER1_type 1 219 0 1157 250 48 51 chr20 55195366 55195738 -11472267 - MLT1A2 LTR MaLR 0 374 4 799 212 96 10 chr20 55195765 55195963 -11472042 - MIR SINE MIR -30 232 18 545 167 167 50 chr20 55196004 55196202 -11471803 + ORSL DNA AcHobo 55 275 0 265 244 37 146 chr20 55196258 55196422 -11471583 - Charlie8 DNA MER1_type -2152 265 120 450 224 14 7 chr20 55196467 55196610 -11471395 + GA-rich Low_complexity Low_complexity 2 145 0 408 266 109 8 chr20 55196632 55196760 -11471245 + MIR SINE MIR 15 155 -107 789 274 69 31 chr20 55196863 55197180 -11470825 - MER102b DNA MER1_type -9 332 4 573 252 25 110 chr20 55197798 55197946 -11470059 - MER102b DNA MER1_type -1135 293 185 2217 120 0 0 chr20 55197946 55198245 -11469760 - AluSx SINE Alu -13 299 1 573 252 25 110 chr20 55198245 55198413 -11469592 - MER102b DNA MER1_type -1243 185 4 225 0 0 0 chr20 55198787 55198812 -11469193 + (T)n Simple_repeat Simple_repeat 1 25 0 243 170 0 0 chr20 55199378 55199425 -11468580 + (CA)n Simple_repeat Simple_repeat 2 48 0 250 211 297 40 chr20 55199613 55199788 -11468217 + MIR SINE MIR 8 227 -35 198 103 0 0 chr20 55200983 55201012 -11466993 + (CA)n Simple_repeat Simple_repeat 2 30 0 2088 100 28 17 chr20 55201143 55201434 -11466571 - AluSx SINE Alu -18 294 1 1950 133 0 3 chr20 55201919 55202205 -11465800 + AluJo SINE Alu 7 291 -21 375 217 33 33 chr20 55202303 55202395 -11465610 + L2 LINE L2 3203 3294 -19 725 248 25 0 chr20 55202425 55202586 -11465419 + MIR SINE MIR 2 166 -96 29 0 0 0 chr20 55202718 55202747 -11465258 + AT_rich Low_complexity Low_complexity 1 29 0 234 0 0 0 chr20 55202789 55202815 -11465190 + (TG)n Simple_repeat Simple_repeat 2 27 0 218 93 0 23 chr20 55202906 55202949 -11465056 + (TTTAA)n Simple_repeat Simple_repeat 4 45 0 2201 97 7 0 chr20 55202956 55203244 -11464761 - AluSp SINE Alu -23 290 1 207 0 0 0 chr20 55203499 55203522 -11464483 + (A)n Simple_repeat Simple_repeat 1 23 0 227 83 0 62 chr20 55204241 55204289 -11463716 + (T)n Simple_repeat Simple_repeat 1 45 0 292 346 74 41 chr20 55205190 55205459 -11462546 - L2 LINE L2 -49 3223 2946 230 267 139 0 chr20 55205544 55205630 -11462375 + MIR SINE MIR 74 171 -91 22 0 0 0 chr20 55205800 55205822 -11462183 + AT_rich Low_complexity Low_complexity 1 22 0 917 184 31 63 chr20 55205850 55205897 -11462108 - L1MB1 LINE L1 0 6168 6121 2853 117 2 5 chr20 55205897 55206300 -11461705 - L1PA13 LINE L1 -3 6160 5759 917 184 31 63 chr20 55206300 55206475 -11461530 - L1MB1 LINE L1 -47 6121 5953 331 300 29 50 chr20 55206841 55206981 -11461024 - MLT1L LTR MaLR -53 562 426 249 307 112 44 chr20 55207048 55207253 -11460752 - MLT1L LTR MaLR -371 244 26 777 274 89 61 chr20 55207557 55207616 -11460389 - LTR33 LTR ERVL 0 521 465 4710 61 0 11 chr20 55207616 55208189 -11459816 - L1PA7 LINE L1 0 6154 5588 777 274 89 61 chr20 55208189 55208622 -11459383 - LTR33 LTR ERVL -56 465 15 273 199 12 41 chr20 55208778 55208878 -11459127 + CT-rich Low_complexity Low_complexity 1 97 0 679 297 79 58 chr20 55210345 55210739 -11457266 - L2 LINE L2 -1 3312 2911 347 302 33 55 chr20 55210723 55210905 -11457100 - L2 LINE L2 -339 2975 2798 * 1054 274 181 12 chr20 55210965 55211067 -11456938 + L2 LINE L2 970 1053 -2261 2150 259 52 19 chr20 55211067 55211591 -11456414 - MLT1F LTR MaLR -1 541 1 1054 274 181 12 chr20 55211591 55211973 -11456032 + L2 LINE L2 1053 1536 -1778 2494 121 28 28 chr20 55211983 55212347 -11455658 - THE1B LTR MaLR 0 364 1 1587 220 68 53 chr20 55212347 55212802 -11455203 - MLT1C LTR MaLR -3 464 3 2727 306 96 15 chr20 55212803 55214424 -11453581 + L2 LINE L2 1534 3301 -12 258 286 10 25 chr20 55214442 55214563 -11453442 + CT-rich Low_complexity Low_complexity 1 119 0 24 0 0 0 chr20 55214971 55214995 -11453010 + AT_rich Low_complexity Low_complexity 1 24 0 260 119 24 0 chr20 55215162 55215204 -11452801 - Charlie8 DNA MER1_type -2144 273 231 1733 230 49 3 chr20 55215884 55216232 -11451773 - MLT1A1 LTR MaLR 0 365 2 618 260 54 50 chr20 55216432 55216674 -11451331 + MIR SINE MIR 10 252 -10 315 333 25 8 chr20 55217175 55217295 -11450710 - L2 LINE L2 0 3272 3151 23 0 0 0 chr20 55217492 55217515 -11450490 + AT_rich Low_complexity Low_complexity 1 23 0 1237 208 14 5 chr20 55218127 55218343 -11449662 + MER20 DNA MER1_type 2 219 0 1509 227 27 11 chr20 55218355 55218647 -11449358 + MLT1F LTR MaLR 172 473 -69 2146 153 12 24 chr20 55218647 55218988 -11449017 - MER1B DNA MER1_type 0 337 1 1509 227 27 11 chr20 55218988 55219060 -11448945 + MLT1F LTR MaLR 473 542 0 507 303 154 0 chr20 55219232 55219440 -11448565 + MIR SINE MIR 17 256 -6 418 212 40 20 chr20 55219677 55219776 -11448229 - MER96B DNA MER1_type? -21 396 296 254 135 0 0 chr20 55219788 55219825 -11448180 + MER58A DNA MER1_type 37 73 -34 21 0 0 0 chr20 55220188 55220209 -11447796 + AT_rich Low_complexity Low_complexity 1 21 0 699 65 97 0 chr20 55220209 55220302 -11447703 - L1PB1 LINE L1 -1 6150 6049 484 323 170 14 chr20 55220339 55220698 -11447307 + L1M4 LINE L1 3083 3497 -2649 256 231 33 66 chr20 55220715 55220806 -11447199 + MER45 DNA AcHobo 1 88 -865 702 167 9 0 chr20 55220848 55220962 -11447043 - AluJo/FRAM SINE Alu -1 311 197 1532 154 0 21 chr20 55220962 55221202 -11446803 - AluJo SINE Alu -77 235 1 223 230 16 40 chr20 55221217 55221343 -11446662 + (TTATA)n Simple_repeat Simple_repeat 5 127 0 318 203 17 0 chr20 55221346 55221405 -11446600 + MER45 DNA AcHobo 1522 1581 0 1969 102 0 0 chr20 55222054 55222309 -11445696 + AluSx SINE Alu 50 304 -8 579 178 25 0 chr20 55222384 55222497 -11445508 - MLT1E LTR MaLR -393 174 57 227 200 20 0 chr20 55222828 55222878 -11445127 - HSMAR1 DNA Mariner 0 1287 1237 293 382 0 0 chr20 55222961 55223063 -11444942 - MER117 DNA MER1_type -68 129 28 341 246 148 41 chr20 55223726 55223848 -11444157 + MIR SINE MIR 17 151 -57 233 225 108 67 chr20 55224130 55224250 -11443755 - Charlie8 DNA MER1_type -2210 207 83 759 263 39 42 chr20 55224257 55224483 -11443522 - MIR SINE MIR -3 259 33 2221 107 3 7 chr20 55224483 55224783 -11443222 - AluSq SINE Alu -14 299 1 759 263 39 42 chr20 55224783 55224815 -11443190 - MIR SINE MIR -229 33 2 195 42 0 0 chr20 55224820 55224844 -11443161 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 565 200 65 2 chr20 55224860 55224991 -11443014 - L1MC4 LINE L1 -3 8039 7648 453 50 0 0 chr20 55224999 55225059 -11442946 + (CA)n Simple_repeat Simple_repeat 2 61 0 1556 209 12 82 chr20 55225060 55225472 -11442533 + L1MC4 LINE L1 6705 7087 -955 756 87 0 0 chr20 55225489 55225581 -11442424 + AluSc SINE Alu 18 109 -200 256 273 91 34 chr20 55225686 55225774 -11442231 + L2 LINE L2 3165 3257 -15 213 323 15 0 chr20 55226153 55226218 -11441787 + GA-rich Low_complexity Low_complexity 1 66 0 900 79 94 0 chr20 55226658 55226785 -11441220 - MER85 DNA T2_type 0 139 1 2030 124 31 0 chr20 55226983 55227273 -11440732 - AluSq SINE Alu -14 299 1 273 299 13 0 chr20 55227307 55227384 -11440621 + MIR SINE MIR 48 125 -137 1927 120 3 3 chr20 55227682 55227965 -11440040 - MER41B LTR ERV1 -88 547 265 239 173 0 19 chr20 55228144 55228196 -11439809 - L1MC4 LINE L1 -860 7182 7132 1397 65 0 85 chr20 55228203 55228403 -11439602 - AluSc SINE Alu -20 289 107 652 323 30 9 chr20 55228422 55228654 -11439351 + MIR SINE MIR 25 261 -1 596 269 92 18 chr20 55228809 55229121 -11438884 + LTR16A1 LTR ERVL 82 401 -56 210 307 102 55 chr20 55229211 55229592 -11438413 - L2 LINE L2 -338 2976 2578 288 91 0 0 chr20 55230689 55230733 -11437272 + (CA)n Simple_repeat Simple_repeat 1 44 0 396 0 0 0 chr20 55231587 55231631 -11436374 + (A)n Simple_repeat Simple_repeat 1 44 0 2283 98 0 16 chr20 55232101 55232407 -11435598 + AluSg SINE Alu 3 303 -7 268 235 59 0 chr20 55232761 55232829 -11435176 + MER58A DNA MER1_type 11 82 -25 1298 261 124 16 chr20 55232832 55233371 -11434634 + MLT1E2 LTR MaLR 5 626 0 778 217 13 7 chr20 55233371 55233516 -11434489 + MER58A DNA MER1_type 78 223 -1 472 256 67 31 chr20 55233547 55233783 -11434222 - MIR SINE MIR -8 254 3 534 278 98 26 chr20 55234359 55234593 -11433412 - MIR SINE MIR -8 254 4 2211 103 20 3 chr20 55236045 55236337 -11431668 - AluSx SINE Alu -15 297 1 945 216 19 5 chr20 55236368 55236576 -11431429 + L1MD2 LINE L1 6145 6355 -4 786 305 123 22 chr20 55237586 55238188 -11429817 + L2 LINE L2 2622 3291 -22 510 256 58 0 chr20 55238201 55238338 -11429667 - L2 LINE L2 -1 3312 3168 306 0 0 0 chr20 55238868 55238902 -11429103 + (T)n Simple_repeat Simple_repeat 1 34 0 426 262 181 7 chr20 55239712 55239861 -11428144 - MER5A DNA MER1_type -6 183 9 576 281 103 0 chr20 55240119 55240322 -11427683 + MIR SINE MIR 5 228 -34 312 200 47 141 chr20 55240435 55240584 -11427421 - MIR SINE MIR -96 166 33 2170 124 0 0 chr20 55240584 55240883 -11427122 - AluSx SINE Alu -13 299 1 312 200 47 141 chr20 55240883 55240903 -11427102 - MIR SINE MIR -229 33 13 251 271 0 0 chr20 55241536 55241606 -11426399 + MER113 DNA MER1_type? 7 76 -445 2424 109 66 19 chr20 55241751 55242218 -11425787 + MER1A DNA MER1_type 1 529 0 438 264 74 58 chr20 55243022 55243280 -11424725 - L1MC4 LINE L1 0 8042 7781 1484 182 34 47 chr20 55243397 55243694 -11424311 + AluJb SINE Alu 1 293 -19 234 294 0 29 chr20 55243918 55243986 -11424019 - MER113 DNA MER1_type? -3 518 453 696 178 54 16 chr20 55244008 55244137 -11423868 + AluSq/x SINE Alu 2 135 -177 1987 130 7 10 chr20 55244137 55244437 -11423568 + AluSx SINE Alu 1 299 -13 255 308 75 26 chr20 55244521 55244849 -11423156 + L2 LINE L2 2680 3099 -173 757 263 56 76 chr20 55244939 55245365 -11422640 + L2 LINE L2 2686 3093 -220 1691 192 0 28 chr20 55245365 55245379 -11422626 - AluJb SINE Alu 0 312 299 1053 121 0 0 chr20 55245379 55245544 -11422461 + (TTCC)n Simple_repeat Simple_repeat 4 168 0 1691 192 0 28 chr20 55245544 55245847 -11422158 - AluJb SINE Alu -13 299 4 757 263 56 76 chr20 55245847 55246058 -11421947 + L2 LINE L2 3093 3307 -6 257 320 10 20 chr20 55246792 55246892 -11421113 + MIR SINE MIR 30 128 -80 341 286 93 39 chr20 55246914 55247096 -11420909 - MIR SINE MIR -2 260 69 614 323 23 53 chr20 55247160 55247460 -11420545 + MER102a DNA MER1_type 39 329 -1 208 344 72 0 chr20 55247676 55247801 -11420204 + L2 LINE L2 2897 3030 -242 * 661 259 35 15 chr20 55247798 55247995 -11420010 - MIR SINE MIR -41 221 21 195 100 0 0 chr20 55251129 55251159 -11416846 + (T)n Simple_repeat Simple_repeat 1 30 0 340 280 0 0 chr20 55251294 55251387 -11416618 + MIR SINE MIR 170 262 0 186 312 13 13 chr20 55252156 55252233 -11415772 - MIR SINE MIR -21 241 165 214 103 77 0 chr20 55252235 55252274 -11415731 + A-rich Low_complexity Low_complexity 4 45 0 218 316 26 43 chr20 55252275 55252392 -11415613 - MIR SINE MIR -71 137 23 2489 74 7 0 chr20 55252595 55252894 -11415111 + AluSx SINE Alu 1 301 -11 2164 122 0 3 chr20 55253744 55254038 -11413967 + AluSx SINE Alu 1 293 -19 382 225 0 99 chr20 55254399 55254502 -11413503 + MIR SINE MIR 49 134 -128 2300 104 3 0 chr20 55254502 55254799 -11413206 + AluSx SINE Alu 1 298 -14 382 225 0 99 chr20 55254799 55254846 -11413159 + MIR SINE MIR 134 184 -78 487 214 10 0 chr20 55255255 55255353 -11412652 + MIR SINE MIR 46 144 -118 205 254 51 0 chr20 55255718 55255777 -11412228 - MIR SINE MIR -78 184 123 31 26 0 0 chr20 55255889 55255927 -11412078 + AT_rich Low_complexity Low_complexity 1 38 0 332 325 0 18 chr20 55255965 55256079 -11411926 + L2 LINE L2 3196 3307 -6 597 259 12 25 chr20 55257292 55257454 -11410551 - L2 LINE L2 -21 3292 3133 22 0 0 0 chr20 55257606 55257628 -11410377 + AT_rich Low_complexity Low_complexity 1 22 0 836 270 123 66 chr20 55258153 55258609 -11409396 + MLT1K LTR MaLR 107 588 0 328 295 39 0 chr20 55258946 55259075 -11408930 + MIR SINE MIR 129 262 0 896 265 45 19 chr20 55259636 55260176 -11407829 - L1M4 LINE L1 -513 5722 3174 799 232 4 46 chr20 55260179 55260420 -11407585 - L1M4 LINE L1 -3280 2935 2705 263 233 50 108 chr20 55260419 55260659 -11407346 - L1M4 LINE L1 -4186 2210 1985 * 311 311 33 44 chr20 55262561 55262741 -11405264 + MER5B DNA MER1_type 1 178 0 264 333 77 0 chr20 55263532 55263649 -11404356 + MIR SINE MIR 83 208 -54 288 0 0 0 chr20 55263913 55263945 -11404060 + (TG)n Simple_repeat Simple_repeat 1 32 0 2151 104 0 0 chr20 55263945 55264224 -11403781 - AluSx SINE Alu -33 279 1 302 282 0 0 chr20 55265178 55265256 -11402749 + LTR67 LTR ERVL 428 505 -52 23 0 0 0 chr20 55265454 55265477 -11402528 + AT_rich Low_complexity Low_complexity 1 23 0 802 285 24 16 chr20 55265640 55265886 -11402119 + MIR SINE MIR 13 260 -2 2260 109 0 0 chr20 55267452 55267745 -11400260 + AluSg SINE Alu 1 293 -17 1730 153 7 39 chr20 55267789 55268097 -11399908 - AluJo SINE Alu -14 298 1 1184 65 0 0 chr20 55268476 55268614 -11399391 + AluY SINE Alu 1 138 -173 715 272 77 40 chr20 55269384 55269720 -11398285 - MLT1G1 LTR MaLR -181 414 8 255 137 49 10 chr20 55270938 55271040 -11396965 + (TA)n Simple_repeat Simple_repeat 1 106 0 408 161 42 0 chr20 55271118 55271261 -11396744 + (TA)n Simple_repeat Simple_repeat 1 149 0 405 274 7 59 chr20 55271340 55271439 -11396566 + L2 LINE L2 3145 3237 -35 778 273 11 0 chr20 55271439 55271615 -11396390 + MER45A DNA AcHobo 1 178 0 405 274 7 59 chr20 55271615 55271650 -11396355 + L2 LINE L2 3237 3272 0 874 294 101 40 chr20 55272543 55273087 -11394918 - MLT1K LTR MaLR -1 587 11 384 293 67 12 chr20 55274424 55274588 -11393417 + MIR SINE MIR 2 174 -88 216 0 0 0 chr20 55274909 55274933 -11393072 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 225 231 86 68 chr20 55275058 55275175 -11392830 + LTR11 LTR ERV 345 463 -221 1142 209 47 103 chr20 55275275 55275512 -11392493 - MLT1A1 LTR MaLR 0 365 157 2059 139 32 29 chr20 55275512 55275886 -11392119 + THE1C LTR MaLR 1 375 0 1142 209 47 103 chr20 55275886 55276035 -11391970 - MLT1A1 LTR MaLR -208 157 1 430 286 32 41 chr20 55276035 55276255 -11391750 - L2 LINE L2 -228 3044 2827 437 195 13 104 chr20 55276880 55277034 -11390971 + L2 LINE L2 3123 3262 -51 191 258 45 30 chr20 55277178 55277244 -11390761 + L2 LINE L2 3199 3265 -48 226 288 91 0 chr20 55277562 55277628 -11390377 - Charlie8 DNA MER1_type -2342 75 4 3415 106 18 35 chr20 55278473 55278567 -11389438 - L1MA3 LINE L1 0 6305 6211 2282 101 7 0 chr20 55278567 55278865 -11389140 + AluSp SINE Alu 1 300 -13 3415 106 18 35 chr20 55278865 55279316 -11388689 - L1MA3 LINE L1 -94 6211 5769 5042 53 6 5 chr20 55279316 55279944 -11388061 - L1PA8 LINE L1 0 6172 5537 3509 116 7 26 chr20 55279944 55280549 -11387456 - L1MA3 LINE L1 -532 5773 5201 406 221 230 33 chr20 55281444 55281657 -11386348 - MIR SINE MIR 0 262 8 467 268 56 22 chr20 55281747 55281926 -11386079 + MIR SINE MIR 4 188 -74 2216 128 36 25 chr20 55281990 55282348 -11385657 - THE1B LTR MaLR 0 364 3 182 220 0 60 chr20 55282968 55283018 -11384987 - L2 LINE L2 -12 3301 3255 188 315 0 0 chr20 55283198 55283252 -11384753 - MIR SINE MIR -60 148 95 348 200 31 0 chr20 55283256 55283321 -11384684 + Charlie1 DNA MER1_type 3 69 -2692 1806 149 53 33 chr20 55283322 55283717 -11384288 + Charlie1 DNA MER1_type 2344 2746 -15 2740 153 14 0 chr20 55283802 55284246 -11383759 + L1PA16 LINE L1 5701 6150 -16 300 198 124 16 chr20 55285200 55285325 -11382680 - MIR SINE MIR -69 139 16 376 219 62 21 chr20 55285468 55285564 -11382441 - MIR SINE MIR -116 146 47 298 233 371 0 chr20 55285789 55285905 -11382100 - MIR SINE MIR -93 169 11 224 308 115 0 chr20 55286294 55286398 -11381607 - MIR SINE MIR -117 145 30 221 268 87 63 chr20 55286664 55286791 -11381214 - L2 LINE L2 -257 3056 2927 344 219 70 70 chr20 55287289 55287476 -11380529 + L2 LINE L2 3022 3208 -105 1300 116 6 0 chr20 55287573 55287754 -11380251 + AluSc SINE Alu 122 303 -6 368 172 46 46 chr20 55288161 55288248 -11379757 - MIR SINE MIR -88 174 88 315 247 26 0 chr20 55288381 55288458 -11379547 - Charlie4 DNA MER1_type 0 1961 1883 2392 97 0 0 chr20 55288558 55288858 -11379147 + AluSx SINE Alu 1 300 -12 206 234 0 0 chr20 55290050 55290097 -11377908 + (CA)n Simple_repeat Simple_repeat 2 48 0 708 249 94 5 chr20 55290130 55290343 -11377662 + MIR SINE MIR 31 262 0 22 0 0 0 chr20 55290410 55290432 -11377573 + AT_rich Low_complexity Low_complexity 1 22 0 334 307 159 0 chr20 55292176 55292339 -11375666 - MIR SINE MIR -4 258 70 272 216 0 54 chr20 55292403 55292477 -11375528 - L1ME4a LINE L1 -74 6047 5978 345 282 74 10 chr20 55292623 55292825 -11375180 - L1ME4a LINE L1 -288 5833 5619 2272 83 0 20 chr20 55293281 55293608 -11374397 - AluSg SINE Alu 0 310 1 471 308 42 81 chr20 55293651 55293986 -11374019 - L2 LINE L2 -26 3246 2925 735 203 198 0 chr20 55294112 55294299 -11373706 - MER58A DNA MER1_type 0 224 1 791 179 15 46 chr20 55294480 55294675 -11373330 - MER5A DNA MER1_type 0 189 1 266 261 54 0 chr20 55294848 55294940 -11373065 - LTR37B LTR ERV1 -56 412 316 508 181 0 0 chr20 55294986 55295113 -11372892 - L1MA7 LINE L1 0 6291 6165 23 0 0 0 chr20 55295639 55295662 -11372343 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr20 55295949 55295972 -11372033 + AT_rich Low_complexity Low_complexity 1 23 0 223 177 48 0 chr20 55296247 55296309 -11371696 + (TA)n Simple_repeat Simple_repeat 1 65 0 2025 130 17 3 chr20 55296873 55297172 -11370833 - AluSc SINE Alu -6 303 1 404 207 229 17 chr20 55297491 55297670 -11370335 - LTR33 LTR ERVL -273 248 32 237 242 112 92 chr20 55297999 55298259 -11369746 - Charlie8 DNA MER1_type -2146 271 7 481 239 234 10 chr20 55298825 55299034 -11368971 + MER102b DNA MER1_type 86 341 0 340 271 194 7 chr20 55299270 55299414 -11368591 - MER5A DNA MER1_type -8 181 11 270 247 123 12 chr20 55299461 55299623 -11368382 - L2 LINE L2 -1203 2111 1932 277 205 108 60 chr20 55300289 55300372 -11367633 + MER5A DNA MER1_type 1 87 -102 278 169 123 0 chr20 55300444 55300509 -11367496 + MER5A DNA MER1_type 103 175 -14 2069 123 0 10 chr20 55301391 55301699 -11366306 - AluSx SINE Alu -7 305 1 359 273 91 51 chr20 55301886 55302062 -11365943 - MIR SINE MIR -10 252 70 428 283 146 19 chr20 55302615 55302820 -11365185 - MIR SINE MIR -30 232 2 1568 167 8 4 chr20 55303102 55303354 -11364651 + AluJb SINE Alu 42 294 -18 380 339 78 78 chr20 55303774 55304161 -11363844 + L2 LINE L2 2551 2937 -377 1073 220 17 61 chr20 55304375 55304401 -11363604 + L1ME3 LINE L1 5611 5637 -525 1950 152 131 8 chr20 55304401 55304782 -11363223 + MSTA LTR MaLR 1 428 0 1073 220 17 61 chr20 55304782 55304854 -11363151 + L1ME3 LINE L1 5637 5711 -451 1061 155 193 38 chr20 55304854 55305144 -11362861 - MER44D DNA MER2_type 0 609 5 1073 220 17 61 chr20 55305144 55305390 -11362615 + L1ME3 LINE L1 5711 5941 -221 431 282 48 29 chr20 55305426 55305645 -11362360 - MIR SINE MIR 0 262 39 720 255 136 4 chr20 55305929 55306172 -11361833 + ORSL DNA AcHobo 1 275 0 2190 118 0 3 chr20 55307188 55307484 -11360521 - AluSc SINE Alu -14 295 1 553 216 7 22 chr20 55307831 55307970 -11360035 - Charlie8 DNA MER1_type -2213 204 68 189 0 0 0 chr20 55308273 55308294 -11359711 + (T)n Simple_repeat Simple_repeat 1 21 0 238 263 163 0 chr20 55308918 55308998 -11359007 - MIR3 SINE MIR -3 205 113 1324 250 93 46 chr20 55309056 55309616 -11358389 + MLT1E LTR MaLR 3 588 -5 285 51 0 0 chr20 55309818 55309857 -11358148 + (TA)n Simple_repeat Simple_repeat 2 40 0 6963 40 1 0 chr20 55309857 55311060 -11356945 - L1PA5 LINE L1 -21 6133 4930 612 293 62 22 chr20 55311199 55311424 -11356581 - MIR SINE MIR -21 241 8 226 333 13 0 chr20 55311450 55311525 -11356480 + MIR SINE MIR 187 262 0 459 249 118 83 chr20 55311758 55312191 -11355814 - MLT1K LTR MaLR -50 538 91 1675 218 97 29 chr20 55312757 55313304 -11354701 - MLT1F1 LTR MaLR 0 567 1 2250 106 3 0 chr20 55313616 55313908 -11354097 + AluSp SINE Alu 1 293 -20 2348 65 41 0 chr20 55316339 55316629 -11351376 + AluSp SINE Alu 1 302 -11 25392 44 9 0 chr20 55316690 55320792 -11347213 + L1PA4 LINE L1 2021 6155 0 649 183 61 91 chr20 55320808 55321038 -11346967 + L1MD2 LINE L1 6098 6320 -39 548 318 123 39 chr20 55321080 55321308 -11346697 + L2 LINE L2 2120 2394 -920 3300 100 81 6 chr20 55321308 55321829 -11346176 - L1PB2 LINE L1 -7 6144 5585 548 318 123 39 chr20 55321829 55321981 -11346024 + L2 LINE L2 2394 2532 -782 428 241 42 37 chr20 55322044 55322235 -11345770 - L1MC5 LINE L1 -63 7898 7707 322 174 130 29 chr20 55322257 55322395 -11345610 - L1MC5 LINE L1 -307 7654 7503 336 228 44 61 chr20 55322485 55322599 -11345406 + LTR16A LTR ERVL 1 112 -338 2316 103 3 3 chr20 55322623 55322934 -11345071 - AluSx SINE Alu -1 311 1 452 286 7 14 chr20 55322934 55323090 -11344915 - L1MC5 LINE L1 -1130 6831 6694 2081 170 56 15 chr20 55323164 55323575 -11344430 - MLT2B1 LTR ERVL -92 428 1 463 247 34 0 chr20 55323575 55323664 -11344341 + MER5A DNA MER1_type 15 106 -83 587 297 85 5 chr20 55323830 55324042 -11343963 - MIR SINE MIR -31 231 3 1423 281 82 27 chr20 55324181 55324472 -11343533 + L2 LINE L2 2474 2748 -565 917 258 5 5 chr20 55324472 55324689 -11343316 + MER58A DNA MER1_type 5 221 -3 1423 281 82 27 chr20 55324689 55325179 -11342826 + L2 LINE L2 2748 3308 -5 321 262 0 48 chr20 55325162 55325246 -11342759 - L2 LINE L2 -1 3271 3192 * 4373 71 9 7 chr20 55325317 55325897 -11342108 + L1PA10 LINE L1 5578 6158 -10 286 315 25 0 chr20 55326128 55326290 -11341715 + L1MC5 LINE L1 7613 7778 -183 258 106 0 0 chr20 55326357 55326404 -11341601 + (T)n Simple_repeat Simple_repeat 1 47 0 6433 68 15 42 chr20 55326405 55327451 -11340554 - SVA Other Other -629 1385 433 295 275 0 77 chr20 55327470 55327561 -11340444 - MIR SINE MIR -161 101 18 258 357 93 0 chr20 55328154 55328283 -11339722 - MIR SINE MIR 0 262 122 627 328 41 12 chr20 55328431 55328675 -11339330 - MIR SINE MIR -10 252 2 2314 30 0 0 chr20 55328779 55329042 -11338963 - AluY SINE Alu -8 303 41 738 224 31 0 chr20 55329153 55329345 -11338660 + MER20 DNA MER1_type 22 219 0 217 306 16 0 chr20 55329450 55329512 -11338493 + L2 LINE L2 2992 3054 -218 183 80 0 0 chr20 55329692 55329717 -11338288 + (A)n Simple_repeat Simple_repeat 1 25 0 490 164 21 4 chr20 55329876 55329985 -11338020 - L1ME1 LINE L1 0 6178 6066 2087 124 0 0 chr20 55330041 55330355 -11337650 - AluSx SINE Alu 0 314 1 183 42 0 0 chr20 55330357 55330381 -11337624 + (TTTTTA)n Simple_repeat Simple_repeat 2 25 0 2661 221 66 34 chr20 55330423 55331128 -11336877 - L1ME1 LINE L1 -7 6159 5402 1844 182 0 13 chr20 55331128 55331430 -11336575 + AluJb SINE Alu 1 298 -14 2661 221 66 34 chr20 55331430 55331956 -11336049 - L1ME1 LINE L1 -764 5402 4894 332 198 49 12 chr20 55331994 55332075 -11335930 + LTR45 LTR ERV1 52 135 -390 568 209 57 6 chr20 55332136 55332294 -11335711 + LTR45B LTR ERV1 324 489 0 312 231 26 0 chr20 55332305 55332383 -11335622 - L1ME1 LINE L1 -1260 4886 4807 606 304 16 5 chr20 55332403 55332594 -11335411 - MIR SINE MIR -14 248 56 274 375 46 20 chr20 55332627 55332779 -11335226 + L2 LINE L2 3117 3272 0 21 36 0 0 chr20 55333580 55333608 -11334397 + AT_rich Low_complexity Low_complexity 1 28 0 463 264 54 60 chr20 55333634 55333801 -11334204 - MER5B DNA MER1_type -12 166 1 200 336 67 11 chr20 55333799 55333955 -11334050 - MER5B DNA MER1_type -3 186 10 * 396 247 240 0 chr20 55334267 55334413 -11333592 - MER5A DNA MER1_type 0 189 9 440 288 7 36 chr20 55334823 55334962 -11333043 + MIR SINE MIR 127 261 -1 25 0 0 0 chr20 55335227 55335252 -11332753 + AT_rich Low_complexity Low_complexity 1 25 0 354 250 0 31 chr20 55335270 55335294 -11332711 - L1MA10 LINE L1 -36 6298 6275 652 248 10 77 chr20 55335294 55335592 -11332413 - L1ME1 LINE L1 -47 6119 5842 2237 222 97 16 chr20 55335596 55336782 -11331223 - L1MEc LINE L1 -3089 3126 1900 46 62 0 0 chr20 55336835 55336916 -11331089 + AT_rich Low_complexity Low_complexity 1 81 0 435 209 9 35 chr20 55336916 55337031 -11330974 - L1MEc LINE L1 -5571 825 714 1074 172 29 0 chr20 55337096 55337300 -11330705 + MER2 DNA MER2_type 1 210 -135 22 56 0 0 chr20 55337330 55337366 -11330639 + AT_rich Low_complexity Low_complexity 1 36 0 1175 151 63 25 chr20 55337421 55337660 -11330345 + Tigger7 DNA MER2_type 2244 2491 0 1699 271 39 37 chr20 55337661 55338330 -11329675 - L1MEc LINE L1 -5688 708 39 348 326 83 34 chr20 55338386 55338650 -11329355 - L1MC4a LINE L1 -1834 5974 5698 192 77 0 0 chr20 55338651 55338677 -11329328 + (TC)n Simple_repeat Simple_repeat 2 27 0 21 36 0 0 chr20 55338764 55338792 -11329213 + AT_rich Low_complexity Low_complexity 1 28 0 656 229 60 27 chr20 55338842 55339025 -11328980 - MIR SINE MIR -47 215 27 572 278 68 25 chr20 55339073 55339354 -11328651 - L1MC4a LINE L1 -1929 5879 5587 819 289 114 41 chr20 55340859 55341427 -11326578 - L2 LINE L2 -5 3308 2698 832 224 151 20 chr20 55341429 55341733 -11326272 - MER2 DNA MER2_type 0 345 2 626 228 8 0 chr20 55341744 55341896 -11326109 + L1ME1 LINE L1 6023 6183 -1 453 322 51 11 chr20 55341908 55342085 -11325920 - L2 LINE L2 -629 2685 2502 298 325 4 107 chr20 55342187 55342421 -11325584 + L2 LINE L2 2497 2706 -608 247 222 148 25 chr20 55342422 55342503 -11325502 - L2 LINE L2 -5 3308 3218 355 196 101 94 chr20 55342509 55342599 -11325406 + Charlie7 DNA MER1_type 317 410 -2202 2166 119 3 0 chr20 55342599 55342892 -11325113 + AluSx SINE Alu 1 294 -18 355 196 101 94 chr20 55342892 55342939 -11325066 + Charlie7 DNA MER1_type 410 455 -2157 419 254 105 24 chr20 55342944 55343355 -11324650 + Charlie7 DNA MER1_type 2086 2610 -2 198 352 84 34 chr20 55343995 55344174 -11323831 - MIR SINE MIR -12 250 63 1801 224 91 4 chr20 55345559 55346032 -11321973 - LTR40a LTR ERVL 0 519 6 1534 32 0 0 chr20 55347270 55347459 -11320546 - L1PA4 LINE L1 -265 5890 5702 1641 44 5 0 chr20 55347459 55347663 -11320342 + L1PA4 LINE L1 5946 6152 -3 218 385 8 0 chr20 55349323 55349440 -11318565 - MIR SINE MIR -25 237 120 308 249 3 61 chr20 55350152 55350251 -11317754 + AluJ/FRAM SINE Alu 216 293 -9 25 51 0 0 chr20 55350352 55350391 -11317614 + AT_rich Low_complexity Low_complexity 1 39 0 2407 54 0 7 chr20 55350554 55350850 -11317155 - AluY SINE Alu -17 294 1 4355 74 5 0 chr20 55350875 55351441 -11316564 - L1PA10 LINE L1 -12 6156 5588 2025 99 18 0 chr20 55351441 55351806 -11316199 + L1PA10 LINE L1 5194 5563 -605 200 268 54 0 chr20 55351928 55351984 -11316021 + L2 LINE L2 3206 3264 -8 319 326 114 5 chr20 55352026 55352219 -11315786 - MIR SINE MIR 0 262 49 279 0 0 0 chr20 55353022 55353053 -11314952 + (TG)n Simple_repeat Simple_repeat 2 32 0 335 346 88 6 chr20 55353255 55353437 -11314568 + MIR SINE MIR 49 245 -17 927 254 67 8 chr20 55353621 55353889 -11314116 + MLT1F1 LTR MaLR 278 561 -6 1824 136 0 14 chr20 55353973 55354252 -11313753 - AluJb SINE Alu -37 275 1 367 293 164 24 chr20 55354292 55354500 -11313505 + L2 LINE L2 3077 3313 0 514 304 119 43 chr20 55356052 55356125 -11311880 - L2 LINE L2 -3 3310 3244 1596 179 35 61 chr20 55356125 55356500 -11311505 - MLT1A1 LTR MaLR 0 365 1 514 304 119 43 chr20 55356500 55356609 -11311396 - L2 LINE L2 -69 3244 3145 2027 125 31 0 chr20 55356609 55356896 -11311109 + AluSx SINE Alu 1 296 -16 514 304 119 43 chr20 55356896 55357395 -11310610 - L2 LINE L2 -168 3145 2566 217 335 55 55 chr20 55357719 55357883 -11310122 - MER5A DNA MER1_type -9 180 17 * 258 391 43 7 chr20 55357747 55357885 -11310120 + MER5A DNA MER1_type 47 189 0 184 344 189 39 chr20 55357954 55358134 -11309871 + MIR SINE MIR 23 229 -33 186 43 0 0 chr20 55358151 55358174 -11309831 + (CAA)n Simple_repeat Simple_repeat 2 24 0 483 279 49 60 chr20 55358174 55358215 -11309790 - MIR SINE MIR -6 256 216 2307 99 3 0 chr20 55358215 55358519 -11309486 - AluSq SINE Alu -8 305 1 483 279 49 60 chr20 55358519 55358660 -11309345 - MIR SINE MIR -46 216 76 227 241 103 0 chr20 55359126 55359184 -11308821 + MIR SINE MIR 90 153 -55 224 100 25 0 chr20 55359222 55359262 -11308743 + (CA)n Simple_repeat Simple_repeat 2 42 0 254 266 0 0 chr20 55359597 55359661 -11308344 - MLT1K LTR MaLR -14 574 511 404 263 102 16 chr20 55360434 55360622 -11307383 - MIR SINE MIR -47 215 18 827 113 31 117 chr20 55360916 55361064 -11306941 - L1MA4 LINE L1 -4 6296 6172 1869 154 41 0 chr20 55361064 55361356 -11306649 - AluJo SINE Alu -8 304 1 827 113 31 117 chr20 55361356 55361429 -11306576 - L1MA4 LINE L1 -128 6172 6094 320 204 80 0 chr20 55361468 55361556 -11306449 - L1MA4 LINE L1 -180 6120 6026 21 57 0 0 chr20 55361563 55361598 -11306407 + AT_rich Low_complexity Low_complexity 1 35 0 351 301 72 42 chr20 55362286 55362592 -11305413 + MLT1L LTR MaLR 162 476 -139 207 140 18 53 chr20 55362784 55362841 -11305164 + A-rich Low_complexity Low_complexity 1 55 0 478 181 0 12 chr20 55363888 55363971 -11304034 - L2 LINE L2 -3 3310 3229 451 236 26 72 chr20 55364298 55364536 -11303469 - MLT1H LTR MaLR -2 547 319 2583 84 6 3 chr20 55364881 55365238 -11302767 - L1PB1 LINE L1 -3 6148 5791 219 139 0 0 chr20 55365249 55365285 -11302720 + (TA)n Simple_repeat Simple_repeat 1 36 0 422 114 0 0 chr20 55365287 55365357 -11302648 - L1PB1 LINE L1 -361 5790 5721 421 225 151 44 chr20 55366881 55367179 -11300826 + LTR37A LTR ERV1 97 426 0 442 230 68 102 chr20 55367181 55367333 -11300672 + MIR SINE MIR 23 166 -96 3962 104 39 10 chr20 55367333 55367950 -11300055 + MER41B LTR ERV1 1 635 0 442 230 68 102 chr20 55367950 55368032 -11299973 + MIR SINE MIR 166 249 -13 303 28 0 0 chr20 55368501 55368537 -11299468 + (CAG)n Simple_repeat Simple_repeat 1 36 0 264 240 333 0 chr20 55368537 55368633 -11299372 + MER5A DNA MER1_type 51 178 -11 248 295 80 36 chr20 55368771 55368883 -11299122 + L2 LINE L2 3197 3313 0 425 308 68 20 chr20 55369088 55369234 -11298771 + MIR SINE MIR 2 154 -108 208 259 0 0 chr20 55370035 55370089 -11297916 + (TA)n Simple_repeat Simple_repeat 2 55 0 571 251 155 17 chr20 55370776 55371015 -11296990 + MLT1K LTR MaLR 301 572 -16 27 29 0 0 chr20 55371294 55371328 -11296677 + AT_rich Low_complexity Low_complexity 1 34 0 689 222 101 0 chr20 55371328 55371526 -11296479 - L1MB1 LINE L1 -28 6161 5944 921 241 45 7 chr20 55372208 55372499 -11295506 - LTR37A LTR ERV1 -2 424 123 674 293 106 45 chr20 55372646 55372834 -11295171 + L2 LINE L2 2748 2923 -390 2491 101 13 19 chr20 55372834 55373211 -11294794 - THE1C LTR MaLR 0 375 1 674 293 106 45 chr20 55373211 55373542 -11294463 + L2 LINE L2 2923 3300 -13 690 291 90 33 chr20 55373631 55373999 -11294006 - MLT1J2 LTR MaLR -27 423 35 22 35 0 0 chr20 55374108 55374137 -11293868 + AT_rich Low_complexity Low_complexity 1 29 0 2021 203 112 10 chr20 55375242 55375734 -11292271 - MLT1F LTR MaLR 0 542 1 731 286 157 39 chr20 55376630 55377292 -11290713 - L2 LINE L2 -38 3275 2523 286 240 74 0 chr20 55377720 55377836 -11290169 - Charlie5 DNA MER1_type 0 2623 2499 266 146 21 0 chr20 55377836 55377884 -11290121 - MLT2C2 LTR ERVL 0 464 416 1201 169 0 5 chr20 55377886 55378093 -11289912 + MER2 DNA MER2_type 1 206 -139 213 217 0 0 chr20 55378216 55378262 -11289743 + (CATATA)n Simple_repeat Simple_repeat 3 48 0 237 260 0 0 chr20 55378267 55378436 -11289569 + (CAGAGA)n Simple_repeat Simple_repeat 4 172 0 2307 218 15 15 chr20 55378500 55379047 -11288958 - MLT2B3 LTR ERVL -19 515 1 543 183 24 8 chr20 55379049 55379175 -11288830 - Charlie5 DNA MER1_type -111 2501 2374 2506 81 7 0 chr20 55379589 55379899 -11288106 - AluSq SINE Alu 0 313 2 952 225 143 67 chr20 55380526 55380903 -11287102 + LTR36 LTR ERV1 1 437 -174 1772 138 21 35 chr20 55380903 55381192 -11286813 - AluJo SINE Alu -23 289 5 952 225 143 67 chr20 55381192 55381382 -11286623 + LTR36 LTR ERV1 437 611 0 1109 194 59 93 chr20 55382739 55382793 -11285212 - MLT2C1 LTR ERVL 0 397 343 398 20 20 0 chr20 55382793 55382844 -11285161 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 1109 194 59 93 chr20 55382844 55382899 -11285106 - MLT2C1 LTR ERVL -54 343 288 2129 122 36 33 chr20 55382899 55383259 -11284746 - THE1B LTR MaLR -3 361 1 1109 194 59 93 chr20 55383259 55383555 -11284450 - MLT2C1 LTR ERVL -109 288 5 316 298 11 11 chr20 55383680 55383774 -11284231 - MIR SINE MIR -167 95 2 812 313 101 39 chr20 55383788 55384274 -11283731 - MLT1K LTR MaLR -63 525 10 212 154 0 58 chr20 55384584 55384636 -11283369 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 206 349 61 0 chr20 55384718 55384784 -11283221 + L2 LINE L2 3148 3217 -55 635 283 72 42 chr20 55384806 55385043 -11282962 + MIR SINE MIR 19 262 0 287 267 60 9 chr20 55385784 55385952 -11282053 + L1ME LINE L1 5704 5883 -287 205 152 0 0 chr20 55386015 55386048 -11281957 + (CA)n Simple_repeat Simple_repeat 2 34 0 23 0 0 0 chr20 55386133 55386156 -11281849 + AT_rich Low_complexity Low_complexity 1 23 0 2071 89 33 16 chr20 55386167 55386470 -11281535 + AluSx SINE Alu 1 308 -4 2376 88 0 7 chr20 55386925 55387232 -11280773 - AluSq SINE Alu -3 310 6 1916 199 5 23 chr20 55387291 55387687 -11280318 - MLT1B LTR MaLR -1 389 1 361 238 25 74 chr20 55387845 55387967 -11280038 + MIR SINE MIR 47 162 -100 274 246 31 54 chr20 55388204 55388324 -11279681 - L1ME4a LINE L1 -22 6099 5981 1483 214 63 16 chr20 55388324 55388702 -11279303 - MSTD LTR MaLR 0 396 1 1891 149 62 6 chr20 55388766 55389121 -11278884 + THE1C LTR MaLR 1 375 0 1275 257 67 17 chr20 55389164 55389584 -11278421 + MLT1C LTR MaLR 22 462 -5 378 300 83 28 chr20 55389590 55389770 -11278235 - L1ME4a LINE L1 -180 5941 5752 300 188 0 0 chr20 55390713 55390777 -11277228 + GA-rich Low_complexity Low_complexity 3 66 0 228 312 117 39 chr20 55391051 55391205 -11276800 - MIR SINE MIR -74 188 23 978 324 40 33 chr20 55391263 55391714 -11276291 - L2 LINE L2 -402 2912 2459 5193 123 67 3 chr20 55393364 55394233 -11273772 - Tigger3b DNA MER2_type -1 1230 307 347 244 89 0 chr20 55394830 55394920 -11273085 + MER58A DNA MER1_type 1 98 -9 672 202 9 0 chr20 55394998 55395112 -11272893 + MER58A DNA MER1_type 105 219 -5 753 279 83 59 chr20 55395124 55395892 -11272113 + L1MEc LINE L1 872 1658 -4738 746 254 108 74 chr20 55395902 55396549 -11271456 + L1MEc LINE L1 1691 2359 -4037 995 307 42 60 chr20 55396621 55397142 -11270863 - LTR67 LTR ERVL -2 555 44 559 296 34 26 chr20 55398604 55398837 -11269168 - MER113 DNA MER1_type? -65 456 222 4669 148 7 32 chr20 55398840 55398963 -11269042 - HSMAR2 DNA Mariner -502 800 676 929 92 0 0 chr20 55398963 55399093 -11268912 + FLAM_C SINE Alu 1 130 -3 4669 148 7 32 chr20 55399093 55399787 -11268218 - HSMAR2 DNA Mariner -626 676 3 349 250 122 0 chr20 55399790 55399938 -11268067 - MER113 DNA MER1_type? -321 200 35 430 302 119 10 chr20 55400104 55400306 -11267699 + MLT1L LTR MaLR 39 262 -353 531 283 55 48 chr20 55400336 55400608 -11267397 + MLT1L LTR MaLR 330 603 -12 317 299 97 26 chr20 55400672 55400826 -11267179 + L2 LINE L2 2889 3053 -219 208 289 84 0 chr20 55401183 55401266 -11266739 + MIR SINE MIR 117 206 -56 212 237 17 17 chr20 55401766 55401825 -11266180 + GA-rich Low_complexity Low_complexity 3 61 0 377 309 29 23 chr20 55401841 55402016 -11265989 + L1MC4a LINE L1 5736 5911 -1897 1960 203 25 2 chr20 55402183 55402617 -11265388 - L1MB7 LINE L1 -2 6182 5739 398 234 11 0 chr20 55402681 55402775 -11265230 - MER53 DNA DNA -91 98 4 371 206 30 0 chr20 55402775 55402863 -11265142 - L1MB7 LINE L1 -438 5746 5655 989 172 187 46 chr20 55402933 55403195 -11264810 + AluJo SINE Alu 1 299 -3 33 0 0 0 chr20 55403198 55403231 -11264774 + AT_rich Low_complexity Low_complexity 1 33 0 414 331 27 0 chr20 55403632 55403780 -11264225 + L2 LINE L2 2910 3061 -252 792 191 22 16 chr20 55403789 55403972 -11264033 + MER53 DNA DNA 1 184 -5 1270 225 89 41 chr20 55404068 55404508 -11263497 - MLT1C LTR MaLR -1 466 6 1743 151 3 33 chr20 55404911 55405216 -11262789 - AluJo SINE Alu -11 301 6 547 291 40 0 chr20 55405659 55405807 -11262198 + MER45A DNA AcHobo 24 177 -1 403 205 170 64 chr20 55405957 55406128 -11261877 + MIR SINE MIR 54 242 -20 678 303 57 47 chr20 55406205 55406591 -11261414 - L2 LINE L2 -5 3308 2919 229 338 79 22 chr20 55406672 55406811 -11261194 - L2 LINE L2 -5 3267 3121 2346 61 0 0 chr20 55406833 55407157 -11260848 + AluY SINE Alu 1 324 0 2638 14 0 0 chr20 55407454 55407744 -11260261 - AluYa5 SINE Alu -3 308 19 315 252 27 9 chr20 55408024 55408135 -11259870 + (TCTA)n Simple_repeat Simple_repeat 4 116 0 23 0 0 0 chr20 55408265 55408288 -11259717 + AT_rich Low_complexity Low_complexity 1 23 0 347 272 103 21 chr20 55409119 55409362 -11258643 + L1M4 LINE L1 4502 4764 -1382 192 273 9 152 chr20 55410773 55411004 -11257001 - L2 LINE L2 -43 3270 3073 2652 254 55 44 chr20 55411186 55412098 -11255907 - L2 LINE L2 -256 3057 2136 216 255 0 0 chr20 55412355 55412406 -11255599 - L2 LINE L2 0 3313 3263 1915 200 42 38 chr20 55412526 55412811 -11255194 + L1 LINE L1 4125 4414 -1732 414 0 0 0 chr20 55412811 55412857 -11255148 + (TAAAA)n Simple_repeat Simple_repeat 2 47 0 1915 200 42 38 chr20 55412857 55413066 -11254939 + L1 LINE L1 4414 4621 -1525 5225 125 24 26 chr20 55413147 55414727 -11253278 + L1PA16 LINE L1 4581 6157 -9 577 170 59 0 chr20 55414914 55415067 -11252938 - Charlie5 DNA MER1_type -49 2563 2402 183 80 0 0 chr20 55415087 55415112 -11252893 + (CATA)n Simple_repeat Simple_repeat 1 25 0 361 217 14 0 chr20 55415126 55415195 -11252810 - Charlie5 DNA MER1_type -2542 70 1 1452 159 159 36 chr20 55415743 55416045 -11251960 - MER1B DNA MER1_type 0 339 1 1516 163 86 78 chr20 55416082 55416468 -11251537 + MLT1B LTR MaLR 1 389 -1 1490 178 9 60 chr20 55416566 55416881 -11251124 + AluJo SINE Alu 1 299 -13 242 333 0 8 chr20 55417253 55417373 -11250632 - LTR67 LTR ERVL -11 546 428 422 301 165 0 chr20 55418575 55418751 -11249254 + MIR SINE MIR 46 250 -12 483 239 31 0 chr20 55419023 55419153 -11248852 + MER103 DNA DNA 26 159 -7 351 0 0 0 chr20 55419582 55419621 -11248384 + (TTTTTA)n Simple_repeat Simple_repeat 4 42 0 317 248 9 0 chr20 55419675 55419788 -11248217 + CT-rich Low_complexity Low_complexity 2 115 0 229 97 0 0 chr20 55420277 55420308 -11247697 + MER103 DNA DNA 57 87 -79 186 411 0 11 chr20 55420451 55420541 -11247464 + L2 LINE L2 3225 3313 0 249 354 16 24 chr20 55420662 55420789 -11247216 + MIR SINE MIR 12 137 -125 2756 31 0 0 chr20 55420843 55421169 -11246836 + L1PA4 LINE L1 5825 6150 -5 202 302 0 0 chr20 55421295 55421338 -11246667 + L2 LINE L2 3214 3256 -16 998 177 0 11 chr20 55421589 55421770 -11246235 + MER20 DNA MER1_type 1 179 -40 21 0 0 0 chr20 55421804 55421825 -11246180 + AT_rich Low_complexity Low_complexity 1 21 0 545 317 64 21 chr20 55422283 55422526 -11245479 + MIR SINE MIR 8 260 -2 322 282 21 49 chr20 55422534 55422676 -11245329 - MIR SINE MIR -77 185 48 1038 202 100 108 chr20 55422758 55423287 -11244718 - MER34B LTR ERV1 -29 536 12 2149 75 0 4 chr20 55424316 55424581 -11243424 - AluSc SINE Alu -45 264 1 22 0 0 0 chr20 55424623 55424645 -11243360 + AT_rich Low_complexity Low_complexity 1 22 0 1364 273 52 44 chr20 55424794 55424953 -11243052 - L2 LINE L2 0 3313 3157 1787 183 0 3 chr20 55424953 55425248 -11242757 + AluJo SINE Alu 1 294 -18 1364 273 52 44 chr20 55425248 55425890 -11242115 - L2 LINE L2 -156 3157 2497 2264 179 62 2 chr20 55425951 55426371 -11241634 + MLT2B2 LTR ERVL 1 445 -70 1292 229 52 15 chr20 55426498 55426825 -11241180 - MER2 DNA MER2_type 0 345 7 1696 84 11 84 chr20 55427600 55427873 -11240132 + AluY SINE Alu 53 305 -6 918 203 9 40 chr20 55428525 55428747 -11239258 + MER20 DNA MER1_type 4 218 -1 1103 225 89 37 chr20 55428906 55429065 -11238940 - MLT1A2 LTR MaLR -28 346 197 2337 90 0 3 chr20 55429065 55429365 -11238640 - AluSx SINE Alu -13 299 1 1103 225 89 37 chr20 55429365 55429530 -11238475 - MLT1A2 LTR MaLR -177 197 5 1696 146 26 36 chr20 55429761 55430070 -11237935 - AluJo SINE Alu -6 306 1 798 315 88 59 chr20 55430715 55431608 -11236397 - L2 LINE L2 -524 2790 1805 2189 97 3 10 chr20 55431623 55431922 -11236083 + AluSg SINE Alu 1 297 -13 491 313 134 26 chr20 55432194 55432581 -11235424 - L2 LINE L2 -81 3232 2804 334 301 29 8 chr20 55432671 55432807 -11235198 + L1ME4a LINE L1 5541 5675 -458 1176 41 27 0 chr20 55432928 55433074 -11234931 + L1PA10 LINE L1 6019 6168 0 309 224 157 30 chr20 55433181 55433449 -11234556 + L1ME4a LINE L1 5802 6103 -18 682 354 26 23 chr20 55434948 55435477 -11232528 + Charlie7 DNA MER1_type 8 538 -2074 402 139 79 40 chr20 55435535 55435636 -11232369 + Charlie7 DNA MER1_type 1734 1838 -774 949 90 0 3 chr20 55435676 55435696 -11232309 + L1P4 LINE L1 5514 5533 -621 1276 74 44 74 chr20 55435696 55435809 -11232196 - L1PA13 LINE L1 -1 6162 6058 2523 47 0 7 chr20 55435809 55436110 -11231895 - AluY SINE Alu -12 299 1 1276 74 44 74 chr20 55436110 55436225 -11231780 - L1PA13 LINE L1 -105 6058 5941 949 90 0 3 chr20 55436225 55436347 -11231658 + L1P4 LINE L1 5533 5653 -501 1090 261 104 16 chr20 55436348 55436953 -11231052 + Charlie7 DNA MER1_type 1930 2587 -25 22 35 0 0 chr20 55438128 55438157 -11229848 + AT_rich Low_complexity Low_complexity 1 29 0 306 0 0 0 chr20 55438580 55438614 -11229391 + (CA)n Simple_repeat Simple_repeat 2 35 0 245 200 0 17 chr20 55438635 55438695 -11229310 + L1MC4 LINE L1 6640 6698 -1344 365 225 30 12 chr20 55438712 55438881 -11229124 + (TA)n Simple_repeat Simple_repeat 2 173 0 216 0 0 0 chr20 55438891 55438915 -11229090 + (CA)n Simple_repeat Simple_repeat 1 24 0 787 315 16 86 chr20 55438954 55439231 -11228774 + L2 LINE L2 2710 3005 -308 814 216 0 0 chr20 55439231 55439384 -11228621 - MER5A DNA MER1_type -36 153 1 787 315 16 86 chr20 55439384 55439594 -11228411 + L2 LINE L2 3005 3303 -10 187 379 81 8 chr20 55439593 55439717 -11228288 - L2 LINE L2 0 3272 3140 * 21 0 0 0 chr20 55440376 55440397 -11227608 + AT_rich Low_complexity Low_complexity 1 21 0 3598 129 8 13 chr20 55440544 55441160 -11226845 + MER4B LTR ERV1 1 779 0 378 247 11 0 chr20 55443779 55443868 -11224137 + MLT1I LTR MaLR 320 409 0 251 283 132 47 chr20 55444878 55444984 -11223021 + L2 LINE L2 3158 3272 0 284 290 54 97 chr20 55445834 55446113 -11221892 - MLT1H LTR MaLR -2 547 281 687 271 24 0 chr20 55446120 55446286 -11221719 - MLT1H LTR MaLR -246 303 134 3893 146 4 26 chr20 55446290 55446775 -11221230 - L1M1 LINE L1 -502 6503 6009 2275 91 3 23 chr20 55446775 55447084 -11220921 - AluSp SINE Alu -10 303 1 3893 146 4 26 chr20 55447084 55447743 -11220262 - L1M1 LINE L1 -996 6009 5372 7329 212 51 21 chr20 55447752 55450945 -11217060 - L1M1 LINE L1 -2427 4421 1131 787 204 32 102 chr20 55450967 55451120 -11216885 - L1MEc LINE L1 -4083 2313 2151 7695 23 0 5 chr20 55451120 55452799 -11215206 - L1PA3 LINE L1 0 6155 4481 787 204 32 102 chr20 55452799 55453087 -11214918 - L1MEc LINE L1 -4245 2151 1903 539 113 0 0 chr20 55453122 55453202 -11214803 - MADE1 DNA Mariner 0 80 1 219 217 40 0 chr20 55453203 55453355 -11214650 + (TA)n Simple_repeat Simple_repeat 2 159 0 714 262 70 73 chr20 55453357 55453549 -11214456 - L1MEc LINE L1 -4481 1915 1724 2196 124 0 0 chr20 55453549 55453848 -11214157 - AluSx SINE Alu -13 299 1 714 262 70 73 chr20 55453848 55454228 -11213777 - L1MEc LINE L1 -4672 1724 1345 2275 100 0 3 chr20 55454238 55454538 -11213467 - AluSx SINE Alu -13 299 1 1071 340 54 27 chr20 55454540 55455355 -11212650 - L1MEc LINE L1 -5520 876 40 24 0 0 0 chr20 55455411 55455435 -11212570 + AT_rich Low_complexity Low_complexity 1 24 0 2209 118 10 0 chr20 55455440 55455746 -11212259 - AluSg SINE Alu -1 309 1 192 217 0 0 chr20 55456714 55456760 -11211245 + (CA)n Simple_repeat Simple_repeat 1 46 0 522 269 38 12 chr20 55457549 55457709 -11210296 + L2 LINE L2 2650 2813 -501 354 222 0 25 chr20 55457710 55457791 -11210214 + MER58B DNA MER1_type 4 82 -259 793 156 7 30 chr20 55457797 55457932 -11210073 + AluJo SINE Alu 3 134 -178 1134 198 41 4 chr20 55457974 55458216 -11209789 + MER58B DNA MER1_type 83 333 -8 669 279 36 97 chr20 55458230 55458757 -11209248 + L2 LINE L2 2816 3310 -3 234 0 0 0 chr20 55458842 55458868 -11209137 + (T)n Simple_repeat Simple_repeat 1 26 0 673 284 108 38 chr20 55459233 55459574 -11208431 - LTR16C LTR ERVL -31 460 96 359 347 116 5 chr20 55459663 55459853 -11208152 - MIR SINE MIR -43 219 9 219 337 42 54 chr20 55460029 55460195 -11207810 + L2 LINE L2 2927 3090 -223 443 332 73 36 chr20 55460276 55460644 -11207361 + L2 LINE L2 2682 3057 -215 2185 108 0 3 chr20 55460749 55461056 -11206949 - AluSc SINE Alu -3 306 1 263 196 18 153 chr20 55461745 55461869 -11206136 - MLT1J2 LTR MaLR 0 418 313 305 243 171 9 chr20 55462022 55462133 -11205872 - L2 LINE L2 -596 2718 2590 369 307 114 12 chr20 55462918 55463084 -11204921 + MIR3 SINE MIR 21 203 -5 1676 281 65 27 chr20 55463427 55464140 -11203865 - MER20B DNA MER1_type -1 782 43 506 237 46 35 chr20 55464367 55464540 -11203465 - MER104 DNA MER2_type -1 179 5 317 241 117 36 chr20 55464646 55464783 -11203222 + MIR SINE MIR 115 262 0 2385 98 0 9 chr20 55465228 55465543 -11202462 + AluSp SINE Alu 1 312 -1 186 71 0 0 chr20 55465546 55465574 -11202431 + (CAAAAA)n Simple_repeat Simple_repeat 2 29 0 441 0 0 0 chr20 55465689 55465738 -11202267 + (CA)n Simple_repeat Simple_repeat 1 49 0 321 304 150 10 chr20 55465786 55465993 -11202012 - MIR SINE MIR -12 250 15 6014 249 103 28 chr20 55467805 55469384 -11198621 - L1ME2 LINE L1 -26 6207 4749 879 139 58 17 chr20 55469384 55469556 -11198449 - L1PA15 LINE L1 0 6165 5987 6014 249 103 28 chr20 55469556 55472011 -11195994 - L1ME2 LINE L1 -1484 4749 1905 277 386 87 22 chr20 55472115 55472299 -11195706 - L2 LINE L2 -5 3267 3072 1923 146 3 10 chr20 55472569 55472878 -11195127 + AluJb SINE Alu 1 307 -5 222 291 0 0 chr20 55473161 55473216 -11194789 - MIR SINE MIR -109 153 99 289 231 69 64 chr20 55473453 55473626 -11194379 + L1 LINE L1 4255 4428 -1718 3894 135 53 2 chr20 55474568 55475175 -11192830 + LTR28 LTR ERV1 1 638 -382 1701 124 34 0 chr20 55475293 55475617 -11192388 + Tigger4(Zombi) DNA MER2_type 1 2728 -3 2465 75 0 0 chr20 55475820 55476126 -11191879 + AluY SINE Alu 1 306 -5 1033 243 5 0 chr20 55477103 55477325 -11190680 - MER58A DNA MER1_type -1 223 1 1705 143 0 4 chr20 55477941 55478255 -11189750 - AluSx SINE Alu 0 352 40 1759 28 5 0 chr20 55479772 55479985 -11188020 + L1PA2 LINE L1 5942 6155 0 766 213 27 21 chr20 55480301 55480489 -11187516 + MER5A DNA MER1_type 1 189 0 256 321 89 18 chr20 55480531 55480643 -11187362 + MER5B DNA MER1_type 1 120 -58 180 256 0 0 chr20 55480823 55480862 -11187143 - L2 LINE L2 -33 3280 3242 208 326 112 0 chr20 55480940 55481029 -11186976 - MIR SINE MIR -44 218 120 2154 151 30 0 chr20 55481031 55481403 -11186602 - Tigger4(Zombi) DNA MER2_type 0 2731 2349 2074 116 50 30 chr20 55481403 55481764 -11186241 + THE1C LTR MaLR 1 368 -7 743 144 8 0 chr20 55481764 55481896 -11186109 - Tigger4(Zombi) DNA MER2_type -377 2354 2222 * 752 154 6 91 chr20 55481894 55482069 -11185936 - Tigger4(Zombi) DNA MER2_type -2571 160 1 289 327 9 47 chr20 55482073 55482180 -11185825 - MIR3 SINE MIR -92 116 14 465 320 86 9 chr20 55482189 55482411 -11185594 + MIR SINE MIR 3 241 -21 220 256 0 0 chr20 55482715 55482758 -11185247 + polypurine Low_complexity Low_complexity 3 45 0 1561 185 3 49 chr20 55482881 55483189 -11184816 + AluJb SINE Alu 1 294 -18 189 0 0 0 chr20 55483268 55483289 -11184716 + (A)n Simple_repeat Simple_repeat 1 21 0 225 154 0 0 chr20 55484703 55484742 -11183263 + A-rich Low_complexity Low_complexity 1 39 0 1161 317 53 21 chr20 55485042 55485509 -11182496 - MLT1K LTR MaLR -7 581 100 260 278 139 35 chr20 55486701 55486845 -11181160 - L2 LINE L2 -6 3307 3149 253 243 52 29 chr20 55487059 55487195 -11180810 + L1MC5 LINE L1 7512 7650 -311 180 0 0 0 chr20 55487197 55487217 -11180788 + (TG)n Simple_repeat Simple_repeat 2 21 0 2077 151 22 19 chr20 55487256 55487666 -11180339 - L1MA8 LINE L1 -2 6289 5879 1504 216 87 2 chr20 55487667 55488103 -11179902 + L1M4 LINE L1 4038 4510 -1636 187 311 49 0 chr20 55488137 55488198 -11179807 - L2 LINE L2 -5 3308 3245 22 56 0 0 chr20 55488233 55488269 -11179736 + AT_rich Low_complexity Low_complexity 1 36 0 320 208 42 0 chr20 55488281 55488353 -11179652 + MIR SINE MIR 62 136 -126 1166 251 92 44 chr20 55488388 55488930 -11179075 - L1MC5 LINE L1 -48 7913 7346 311 288 92 38 chr20 55489126 55489310 -11178695 - L1MC5 LINE L1 -756 7205 7012 697 188 7 49 chr20 55489381 55489525 -11178480 + Tigger7 DNA MER2_type 9 146 -404 334 305 17 16 chr20 55489532 55489659 -11178346 + L1MC5 LINE L1 6761 6968 -1074 455 246 46 15 chr20 55489661 55489791 -11178214 + Tigger7 DNA MER2_type 131 264 -469 180 0 0 0 chr20 55489878 55489898 -11178107 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 858 316 7 4 chr20 55489917 55490195 -11177810 - L1MC4 LINE L1 -1064 6978 6700 1060 179 102 12 chr20 55490362 55490508 -11177497 - L1MA9 LINE L1 -1 6311 6180 228 111 0 0 chr20 55490508 55490544 -11177461 + (TG)n Simple_repeat Simple_repeat 1 36 0 1060 179 102 12 chr20 55490544 55490665 -11177340 - L1MA9 LINE L1 -132 6180 6031 1220 298 144 24 chr20 55490824 55491630 -11176375 - L1MC4a LINE L1 -1470 6338 5436 529 294 91 36 chr20 55492142 55493119 -11174886 - L1MC4a LINE L1 -748 5398 4412 3424 156 22 7 chr20 55493186 55493782 -11174223 - MER6A DNA MER2_type 0 605 1 379 277 17 0 chr20 55493789 55493908 -11174097 - L1MC4a LINE L1 -1814 4332 4212 688 184 167 0 chr20 55493909 55494083 -11173922 + L1PA16 LINE L1 5955 6157 -9 28 61 0 0 chr20 55494086 55494135 -11173870 + AT_rich Low_complexity Low_complexity 1 49 0 463 307 18 6 chr20 55494216 55494379 -11173626 + MIR SINE MIR 98 262 0 307 241 0 46 chr20 55494535 55494643 -11173362 + MER113 DNA MER1_type? 2 104 -417 28 29 0 0 chr20 55494683 55494718 -11173287 + AT_rich Low_complexity Low_complexity 1 35 0 619 194 0 47 chr20 55494977 55495004 -11173001 - FLAM_A SINE Alu -179 132 105 2845 115 53 9 chr20 55495004 55495046 -11172959 - MLT2A2 LTR ERVL 0 453 414 378 0 0 0 chr20 55495046 55495088 -11172917 + (TA)n Simple_repeat Simple_repeat 2 43 0 2845 115 53 9 chr20 55495088 55495479 -11172526 - MLT2A2 LTR ERVL -39 414 1 619 194 0 47 chr20 55495479 55495580 -11172425 - FLAM_A SINE Alu -206 105 10 296 261 157 9 chr20 55496511 55496626 -11171379 + MIR SINE MIR 20 151 -111 236 399 72 7 chr20 55496670 55496823 -11171182 - L2 LINE L2 -9 3263 3101 579 282 149 56 chr20 55496886 55497363 -11170642 - L2 LINE L2 0 3313 2705 382 293 37 93 chr20 55497851 55498206 -11169799 + L1ME4a LINE L1 5564 5898 -223 8260 123 9 12 chr20 55498453 55498736 -11169269 - HSMAR2 DNA Mariner -1 1301 1019 1838 203 3 0 chr20 55498736 55499047 -11168958 + AluJb SINE Alu 1 312 0 8260 123 9 12 chr20 55499047 55500068 -11167937 - HSMAR2 DNA Mariner -283 1019 1 501 289 156 4 chr20 55500424 55500649 -11167356 + MIR SINE MIR 3 261 -1 237 230 14 40 chr20 55500665 55500739 -11167266 + (CACCAT)n Simple_repeat Simple_repeat 2 73 0 24 0 0 0 chr20 55500807 55500831 -11167174 + AT_rich Low_complexity Low_complexity 1 24 0 355 314 55 55 chr20 55501190 55501461 -11166544 + MLT1J LTR MaLR 25 295 -216 6029 125 25 22 chr20 55501616 55502521 -11165484 + L1PB1 LINE L1 4654 5555 -596 2240 99 3 0 chr20 55502521 55502831 -11165174 - AluSp SINE Alu 0 311 1 6029 125 25 22 chr20 55502831 55503050 -11164955 + L1PB1 LINE L1 5555 5772 -379 414 39 0 0 chr20 55503050 55503102 -11164903 + (CA)n Simple_repeat Simple_repeat 2 53 0 6029 125 25 22 chr20 55503102 55503461 -11164544 + L1PB1 LINE L1 5772 6151 0 204 40 0 0 chr20 55504551 55504576 -11163429 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 544 333 128 34 chr20 55504592 55504890 -11163115 - L2 LINE L2 -42 3271 3003 2171 122 0 30 chr20 55504890 55505194 -11162811 + AluSx SINE Alu 1 295 -17 544 333 128 34 chr20 55505194 55505520 -11162485 - L2 LINE L2 -310 3003 2562 495 307 43 0 chr20 55505563 55505726 -11162279 - MIR SINE MIR -75 187 18 1048 264 93 31 chr20 55505861 55506294 -11161711 - LTR40c LTR ERVL 0 519 18 2402 146 25 23 chr20 55506449 55506881 -11161124 - Tigger2a DNA MER2_type 0 434 2 2334 99 0 0 chr20 55506906 55507199 -11160806 + AluSg SINE Alu 1 293 -17 1626 209 6 0 chr20 55507640 55507975 -11160030 - MLT1A1 LTR MaLR 0 365 29 306 0 0 0 chr20 55509017 55509051 -11158954 + (TG)n Simple_repeat Simple_repeat 1 34 0 324 228 123 44 chr20 55509175 55509289 -11158716 + MIR SINE MIR 12 134 -128 2040 134 3 144 chr20 55509428 55510004 -11158001 - L1MA9 LINE L1 0 6312 5818 189 0 0 0 chr20 55510643 55510664 -11157341 + (TTCA)n Simple_repeat Simple_repeat 2 22 0 24 32 0 0 chr20 55510719 55510750 -11157255 + AT_rich Low_complexity Low_complexity 1 31 0 1507 177 7 59 chr20 55511141 55511429 -11156576 + AluJo SINE Alu 1 273 -39 686 191 0 0 chr20 55511947 55512073 -11155932 - MER58B DNA MER1_type -8 333 208 2173 89 0 7 chr20 55512181 55512490 -11155515 + AluSc SINE Alu 1 307 0 206 250 23 0 chr20 55512628 55512672 -11155333 - L2 LINE L2 -12 3301 3257 2244 172 22 52 chr20 55513006 55513237 -11154768 - MER66B LTR ERV1 0 486 250 2117 108 0 10 chr20 55513237 55513565 -11154440 - AluSq SINE Alu 0 325 1 2244 172 22 52 chr20 55513565 55513833 -11154172 - MER66B LTR ERV1 -236 250 1 666 299 11 11 chr20 55513942 55514129 -11153876 - MIR SINE MIR -75 187 1 1722 205 46 12 chr20 55514792 55515202 -11152803 - MLT1C LTR MaLR 0 467 44 448 180 34 0 chr20 55515211 55515300 -11152705 - MLT1C LTR MaLR -375 92 1 2259 142 0 24 chr20 55516162 55516535 -11151470 - THE1B LTR MaLR 0 364 1 1736 188 0 25 chr20 55516748 55517068 -11150937 - AluJo SINE Alu 0 312 1 709 202 0 8 chr20 55518108 55518227 -11149778 - FLAM_C SINE Alu -15 118 1 706 223 33 22 chr20 55518419 55518809 -11149196 - LTR37A LTR ERV1 0 426 6 894 234 32 106 chr20 55519079 55519782 -11148223 - MER69B DNA AcHobo -33 1193 481 756 332 20 7 chr20 55519960 55520252 -11147753 - MER69B DNA AcHobo -788 438 143 5234 65 8 0 chr20 55520791 55521456 -11146549 - L1PA7 LINE L1 -3 6151 5482 1945 85 7 0 chr20 55521456 55521834 -11146171 + L1PA7 LINE L1 5109 5488 -666 1558 138 95 35 chr20 55522604 55522887 -11145118 + AluSx SINE Alu 1 300 -12 2041 151 3 0 chr20 55523085 55523396 -11144609 + AluSx SINE Alu 1 312 0 284 243 85 43 chr20 55523743 55523974 -11144031 - MER34 LTR ERV1 0 585 341 405 294 69 69 chr20 55524322 55524611 -11143394 - MER110 LTR ERV1 0 491 203 508 215 141 0 chr20 55524714 55524877 -11143128 - MER110A LTR ERV1 -277 191 6 1745 171 3 30 chr20 55525382 55525687 -11142318 + AluJb SINE Alu 1 297 -15 1523 218 62 32 chr20 55525983 55526251 -11141754 - MER39 LTR ERV1 -1 706 448 2087 112 10 0 chr20 55526251 55526546 -11141459 - AluSg SINE Alu -10 300 3 1523 218 62 32 chr20 55526546 55526818 -11141187 - MER39 LTR ERV1 -259 448 1 183 156 0 0 chr20 55527356 55527388 -11140617 + (CATATA)n Simple_repeat Simple_repeat 1 32 0 373 193 58 0 chr20 55527754 55527853 -11140152 - L1MD3 LINE L1 -2 8040 7890 315 296 31 49 chr20 55528188 55528350 -11139655 + MIR SINE MIR 104 262 0 322 68 0 0 chr20 55528384 55528428 -11139577 + MER67A LTR ERV1 1 44 -499 3476 148 32 36 chr20 55528428 55528565 -11139440 + MER50 LTR ERV1 1 137 -597 2405 79 0 0 chr20 55528565 55528870 -11139135 + AluY SINE Alu 1 305 -6 3476 148 32 36 chr20 55528870 55529446 -11138559 + MER50 LTR ERV1 137 711 -23 265 100 0 0 chr20 55529447 55529487 -11138518 + MER67A LTR ERV1 41 80 -463 2685 204 24 34 chr20 55529487 55530155 -11137850 + MER67B LTR ERV1 1 661 0 1906 108 108 0 chr20 55530370 55530701 -11137304 + LTR49 LTR ERV1 1 368 -227 1900 155 51 25 chr20 55530701 55531056 -11136949 + THE1B LTR MaLR 1 364 0 1377 142 12 8 chr20 55531056 55531288 -11136717 + LTR49 LTR ERV1 363 595 0 2544 129 43 7 chr20 55531292 55531504 -11136501 - MER57B LTR ERV1 0 434 231 234 0 0 0 chr20 55531504 55531530 -11136475 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2544 129 43 7 chr20 55531530 55531736 -11136269 - MER57B LTR ERV1 -203 231 1 614 265 76 80 chr20 55531845 55532156 -11135849 + L1M4 LINE L1 4910 5218 -952 1928 139 31 0 chr20 55532156 55532444 -11135561 - AluSx SINE Alu -15 297 1 614 265 76 80 chr20 55532444 55532662 -11135343 + L1M4 LINE L1 5218 5436 -734 297 328 34 8 chr20 55532981 55533100 -11134905 - L2 LINE L2 -5 3267 3146 203 352 55 23 chr20 55533147 55533275 -11134730 - MIR SINE MIR -6 256 125 844 174 66 33 chr20 55533293 55533390 -11134615 - MER20 DNA MER1_type 0 219 127 1818 180 43 23 chr20 55533390 55533785 -11134220 + MER57A LTR ERV1 1 403 0 844 174 66 33 chr20 55533785 55533899 -11134106 - MER20 DNA MER1_type -92 127 1 2340 94 7 0 chr20 55534149 55534448 -11133557 + AluSq SINE Alu 1 301 -12 297 135 0 0 chr20 55534560 55534612 -11133393 + (TCCA)n Simple_repeat Simple_repeat 1 52 0 645 321 86 30 chr20 55534616 55535113 -11132892 - L2 LINE L2 -40 3273 2761 250 304 10 0 chr20 55535547 55535649 -11132356 + L1M4 LINE L1 5709 5811 -367 811 204 7 0 chr20 55535969 55536111 -11131894 - AluJb SINE Alu -12 300 158 2266 163 42 127 chr20 55536249 55536469 -11131536 + LTR8 LTR ERV1 1 238 -453 431 0 0 0 chr20 55536469 55536521 -11131484 + L1PA3 LINE L1 6102 6153 -2 2266 163 42 127 chr20 55536521 55537055 -11130950 + LTR8 LTR ERV1 238 691 0 2177 237 57 36 chr20 55537057 55537812 -11130193 + L1ME2 LINE L1 5375 6145 -19 326 222 67 33 chr20 55537964 55538054 -11129951 - L2 LINE L2 0 3313 3221 253 288 0 25 chr20 55538352 55538432 -11129573 - LTR16B LTR ERVL -6 458 381 827 178 67 180 chr20 55538440 55538818 -11129187 - MLT2D LTR ERVL -1 413 96 2830 67 0 8 chr20 55538818 55539176 -11128829 + THE1A LTR MaLR 1 355 0 827 178 67 180 chr20 55539176 55539263 -11128742 - MLT2D LTR ERVL -318 96 1 644 311 50 13 chr20 55539263 55539562 -11128443 - LTR16B LTR ERVL -91 373 64 204 349 89 34 chr20 55539764 55540088 -11127917 - L2 LINE L2 -574 2740 2399 641 233 47 68 chr20 55540327 55540756 -11127249 + L1MEc LINE L1 2064 2483 -3913 2124 244 112 6 chr20 55540777 55541635 -11126370 + L1MEc LINE L1 2498 3446 -2769 286 159 0 16 chr20 55541731 55541794 -11126211 - L1MA10 LINE L1 -2 6332 6271 298 223 136 0 chr20 55541795 55541898 -11126107 - L1M4 LINE L1 -3229 2917 2801 1832 254 11 27 chr20 55541957 55542519 -11125486 + L1ME1 LINE L1 5609 6161 -5 364 179 26 0 chr20 55542563 55542641 -11125364 + HsTC2 DNA Tc2 1814 1893 -5 352 250 164 0 chr20 55542894 55543010 -11124995 + MLT1J LTR MaLR 44 178 -333 353 248 116 16 chr20 55543263 55543384 -11124621 + MIR SINE MIR 86 218 -44 270 331 34 0 chr20 55543435 55543572 -11124433 - MIR SINE MIR -67 141 31 289 280 45 45 chr20 55544349 55544481 -11123524 + L2 LINE L2 3182 3313 0 2425 97 3 0 chr20 55545199 55545510 -11122495 + AluSp SINE Alu 1 312 -1 24 53 0 0 chr20 55545743 55545781 -11122224 + AT_rich Low_complexity Low_complexity 1 38 0 793 293 107 47 chr20 55545883 55546459 -11121546 + L2 LINE L2 2621 3250 -63 282 95 0 0 chr20 55546459 55546501 -11121504 + (TG)n Simple_repeat Simple_repeat 1 42 0 793 293 107 47 chr20 55546501 55546562 -11121443 + L2 LINE L2 3250 3306 -7 2247 56 31 0 chr20 55547281 55547567 -11120438 - AluY SINE Alu -16 295 1 714 176 15 15 chr20 55547569 55547705 -11120300 - MER96 DNA MER1_type? -39 136 1 317 185 315 23 chr20 55547766 55547896 -11120109 - MLT1K LTR MaLR -77 511 344 375 280 0 19 chr20 55548303 55548410 -11119595 - MLT1K LTR MaLR -4 584 480 427 312 92 67 chr20 55548493 55548654 -11119351 + MLT1J1 LTR MaLR 65 220 -226 2328 160 22 6 chr20 55548654 55549011 -11118994 - THE1B LTR MaLR -1 363 1 427 312 92 67 chr20 55549011 55549195 -11118810 + MLT1J1 LTR MaLR 220 419 -27 510 279 51 39 chr20 55549238 55549492 -11118513 - MLT1K LTR MaLR -132 456 200 223 272 30 0 chr20 55549758 55549827 -11118178 + MER91B DNA MER1_type 14 86 -54 2223 102 22 22 chr20 55549848 55550161 -11117844 - AluSp SINE Alu 0 313 1 333 325 37 49 chr20 55550907 55551153 -11116852 - L3 LINE CR1 -3 1574 1332 211 283 54 22 chr20 55551165 55551257 -11116748 + MIR SINE MIR 6 100 -162 290 247 26 0 chr20 55551521 55551598 -11116407 + MIR SINE MIR 155 233 -29 195 154 33 16 chr20 55552356 55552489 -11115516 + A-rich Low_complexity Low_complexity 1 135 0 343 95 0 32 chr20 55552662 55552725 -11115280 + (TCC)n Simple_repeat Simple_repeat 2 62 0 224 190 111 6 chr20 55555822 55555912 -11112093 + MIR SINE MIR 104 210 -52 215 224 37 0 chr20 55556088 55556195 -11111810 + (TA)n Simple_repeat Simple_repeat 2 112 0 1383 250 154 39 chr20 55556740 55557263 -11110742 + L2 LINE L2 2157 2755 -559 4509 65 16 14 chr20 55557263 55557816 -11110189 + MER41A LTR ERV1 1 554 0 1383 250 154 39 chr20 55557816 55557876 -11110129 + L2 LINE L2 2755 2807 -507 825 242 78 66 chr20 55557868 55558014 -11109991 + L2 LINE L2 2913 3056 -257 * 1055 18 64 0 chr20 55558014 55558295 -11109710 + (TCTA)n Simple_repeat Simple_repeat 1 299 0 2094 115 7 3 chr20 55558297 55558583 -11109422 - AluSg SINE Alu -23 287 1 825 242 78 66 chr20 55558583 55558827 -11109178 + L2 LINE L2 3056 3313 0 507 274 183 10 chr20 55558844 55559052 -11108953 + MIR SINE MIR 14 257 -5 2009 141 0 3 chr20 55559614 55559911 -11108094 - AluSx SINE Alu -16 296 1 196 323 269 0 chr20 55560483 55560576 -11107429 - L2 LINE L2 -6 3266 3149 2355 92 0 0 chr20 55561211 55561506 -11106499 + AluSq SINE Alu 1 295 -18 4381 169 77 69 chr20 55561527 55561848 -11106157 - L1MD1 LINE L1 -2 6240 5923 1503 198 7 38 chr20 55561848 55562141 -11105864 + AluJb SINE Alu 3 286 -26 4381 169 77 69 chr20 55562141 55562164 -11105841 - L1MD1 LINE L1 -319 5923 5902 1868 80 46 120 chr20 55562164 55562488 -11105517 + AluSg SINE Alu 1 300 -10 4381 169 77 69 chr20 55562488 55563646 -11104359 - L1MD1 LINE L1 -340 5902 4615 246 62 0 0 chr20 55563671 55563703 -11104302 + (CA)n Simple_repeat Simple_repeat 2 33 0 351 291 0 51 chr20 55563754 55563871 -11104134 + MIR SINE MIR 41 151 -111 180 333 0 0 chr20 55563884 55563935 -11104070 + L2 LINE L2 3203 3253 -19 242 235 65 105 chr20 55564445 55564645 -11103360 - MER113 DNA MER1_type? -298 223 32 209 326 0 0 chr20 55565595 55565681 -11102324 + T-rich Low_complexity Low_complexity 1 86 0 226 154 154 0 chr20 55565692 55565744 -11102261 - L2 LINE L2 -74 3239 3180 401 211 7 20 chr20 55565782 55565934 -11102071 + CT-rich Low_complexity Low_complexity 3 152 0 197 139 28 0 chr20 55565952 55565988 -11102017 - MIR SINE MIR -95 167 131 440 192 115 0 chr20 55566003 55566107 -11101898 + L2 LINE L2 3198 3313 0 201 178 0 0 chr20 55566510 55566555 -11101450 + (TG)n Simple_repeat Simple_repeat 2 46 0 23 33 0 0 chr20 55566661 55566691 -11101314 + AT_rich Low_complexity Low_complexity 1 30 0 464 230 48 0 chr20 55566729 55566855 -11101150 - MIR SINE MIR -95 167 36 240 320 185 22 chr20 55566950 55567128 -11100877 - L1MC/D LINE L1 -2160 5648 5442 221 100 50 0 chr20 55567443 55567483 -11100522 + (CATA)n Simple_repeat Simple_repeat 2 43 0 2407 83 0 13 chr20 55567688 55568001 -11100004 - AluSc SINE Alu 0 309 1 668 314 109 19 chr20 55568001 55568424 -11099581 + L2 LINE L2 2852 3312 -1 374 165 0 24 chr20 55569032 55569117 -11098888 + GA-rich Low_complexity Low_complexity 2 84 0 189 111 0 56 chr20 55569149 55569203 -11098802 + (TA)n Simple_repeat Simple_repeat 1 51 0 398 297 75 26 chr20 55569488 55569794 -11098211 - L1ME4a LINE L1 -281 5840 5520 333 0 0 0 chr20 55569800 55569837 -11098168 + (TG)n Simple_repeat Simple_repeat 2 38 0 2276 100 0 16 chr20 55569885 55570195 -11097810 + AluSx SINE Alu 1 305 -7 869 163 30 79 chr20 55570610 55570768 -11097237 - MER3 DNA MER1_type -16 193 46 1869 146 0 13 chr20 55570768 55571069 -11096936 + AluJo SINE Alu 1 297 -15 869 163 30 79 chr20 55571069 55571112 -11096893 - MER3 DNA MER1_type -163 46 2 226 275 187 18 chr20 55571115 55571286 -11096719 + L2 LINE L2 3112 3311 -2 346 277 128 0 chr20 55571853 55572001 -11096004 + LTR16A LTR ERVL 284 450 0 21 0 0 0 chr20 55572576 55572597 -11095408 + AT_rich Low_complexity Low_complexity 1 21 0 2098 115 31 0 chr20 55572722 55573009 -11094996 + AluSx SINE Alu 1 296 -16 2577 58 3 0 chr20 55573599 55573908 -11094097 + AluY SINE Alu 1 310 -1 247 322 11 0 chr20 55573938 55574025 -11093980 - MIR3 SINE MIR -32 176 89 378 341 34 19 chr20 55574064 55574269 -11093736 + MIR SINE MIR 5 212 -50 191 167 0 21 chr20 55574924 55574972 -11093033 + (TTTA)n Simple_repeat Simple_repeat 4 50 0 206 333 50 40 chr20 55576146 55576245 -11091760 - MIR SINE MIR -61 147 48 220 297 80 63 chr20 55576349 55576524 -11091481 - MIR SINE MIR -62 200 23 210 331 198 8 chr20 55576933 55577054 -11090951 - MIR3 SINE MIR -63 145 2 2409 86 3 3 chr20 55577671 55577975 -11090030 - AluSp SINE Alu -9 304 1 249 253 11 46 chr20 55578156 55578243 -11089762 - L1ME LINE L1 -471 5650 5567 2585 65 0 0 chr20 55578299 55578609 -11089396 + AluY SINE Alu 1 310 -1 236 240 10 115 chr20 55579377 55579481 -11088524 - L2 LINE L2 0 3313 3221 395 270 147 77 chr20 55579565 55580114 -11087891 - L1MC4a LINE L1 -363 5758 5557 26 74 0 0 chr20 55580343 55580397 -11087608 + AT_rich Low_complexity Low_complexity 1 54 0 24 0 0 0 chr20 55580427 55580451 -11087554 + AT_rich Low_complexity Low_complexity 1 24 0 702 273 178 34 chr20 55580774 55581185 -11086820 - MLT2F LTR ERVL 0 663 194 313 302 18 18 chr20 55581341 55581451 -11086554 - MLT2F LTR ERVL -503 125 1 * 651 252 130 13 chr20 55581451 55581688 -11086317 + MER113 DNA MER1_type? 193 457 -64 360 250 171 0 chr20 55582196 55582320 -11085685 + MIR SINE MIR 43 195 -67 946 220 75 28 chr20 55582320 55582534 -11085471 + MER58A DNA MER1_type 1 224 0 360 250 171 0 chr20 55582534 55582549 -11085456 + MIR SINE MIR 195 206 -56 1085 268 124 62 chr20 55582593 55583467 -11084538 - L2 LINE L2 -56 3257 2298 240 260 0 0 chr20 55583461 55583511 -11084494 + MIR SINE MIR 209 258 -4 * 21 36 0 0 chr20 55583554 55583582 -11084423 + AT_rich Low_complexity Low_complexity 1 28 0 1750 149 7 7 chr20 55583585 55583874 -11084131 - AluJb SINE Alu -23 289 1 193 158 53 0 chr20 55583876 55583914 -11084091 - L2 LINE L2 -13 3300 3261 290 271 84 28 chr20 55584202 55584309 -11083696 - L2 LINE L2 -2 3270 3158 1394 187 27 51 chr20 55584394 55584726 -11083279 - MER33 DNA MER1_type 0 324 1 298 358 97 24 chr20 55584848 55585136 -11082869 - L2 LINE L2 -373 2941 2633 2075 110 3 10 chr20 55585682 55585993 -11082012 - AluSp SINE Alu 0 313 1 2094 125 3 0 chr20 55585994 55586289 -11081716 - AluSx SINE Alu -16 296 1 22 0 0 0 chr20 55586289 55586311 -11081694 + AT_rich Low_complexity Low_complexity 1 22 0 1395 218 3 10 chr20 55586311 55586605 -11081400 - AluJo SINE Alu -18 294 3 1427 62 0 11 chr20 55587064 55587241 -11080764 + L1PA10 LINE L1 5993 6167 -1 202 355 75 0 chr20 55588113 55588220 -11079785 - MIR SINE MIR 0 262 148 513 243 192 6 chr20 55588255 55588432 -11079573 + MIR SINE MIR 43 252 -10 744 309 107 32 chr20 55588721 55589196 -11078809 - MLT1K LTR MaLR -24 564 54 234 0 0 0 chr20 55590576 55590602 -11077403 + (A)n Simple_repeat Simple_repeat 1 26 0 405 351 67 34 chr20 55590678 55591034 -11076971 + L3b LINE CR1 1111 1478 -105 189 0 0 0 chr20 55591700 55591721 -11076284 + (T)n Simple_repeat Simple_repeat 1 21 0 320 209 11 0 chr20 55591961 55592052 -11075953 + CT-rich Low_complexity Low_complexity 3 94 0 2194 95 3 10 chr20 55592131 55592426 -11075579 - AluSq SINE Alu -20 293 1 241 233 0 0 chr20 55592633 55592676 -11075329 - MLT1K LTR MaLR -462 43 1 189 327 18 0 chr20 55593724 55593779 -11074226 - MIR SINE MIR -186 76 21 280 359 164 0 chr20 55593830 55593958 -11074047 - L2 LINE L2 0 3272 3124 311 331 40 0 chr20 55594567 55594691 -11073314 + MIR SINE MIR 45 173 -89 261 250 0 29 chr20 55594692 55594760 -11073245 + (ATGGTG)n Simple_repeat Simple_repeat 1 66 0 1636 194 39 22 chr20 55594764 55595120 -11072885 + MLT1A1 LTR MaLR 1 362 -3 309 286 27 0 chr20 55595124 55595236 -11072769 - MIR SINE MIR -11 251 137 5290 32 0 0 chr20 55595237 55595857 -11072148 - L1PA4 LINE L1 0 6155 5536 2138 41 4 0 chr20 55595857 55596210 -11071795 + L1PA4 LINE L1 5181 5534 -621 1221 298 115 31 chr20 55597241 55597610 -11070395 + L2 LINE L2 2357 2694 -619 1784 188 0 22 chr20 55597610 55597929 -11070076 + AluJo SINE Alu 1 312 0 1221 298 115 31 chr20 55597929 55598292 -11069713 + L2 LINE L2 2694 3145 -168 1730 248 72 54 chr20 55598383 55599088 -11068917 - MER21B LTR ERV1 -145 718 1 271 261 38 108 chr20 55599107 55599229 -11068776 + L2 LINE L2 3164 3274 -39 1490 110 55 0 chr20 55599229 55599447 -11068558 + MER30 DNA MER1_type 1 230 0 271 261 38 108 chr20 55599447 55599481 -11068524 + L2 LINE L2 3274 3309 -4 2272 108 16 0 chr20 55599622 55599928 -11068077 - AluSx SINE Alu -1 311 1 319 104 21 0 chr20 55600143 55600191 -11067814 + L2 LINE L2 3265 3313 0 2147 134 3 0 chr20 55600398 55600703 -11067302 + AluSx SINE Alu 1 306 -6 274 311 0 0 chr20 55600763 55600837 -11067168 - Zaphod DNA AcHobo -1 4030 3957 439 187 0 0 chr20 55600842 55600917 -11067088 - AluSg/x SINE Alu -20 289 215 2067 138 10 0 chr20 55601070 55601368 -11066637 - AluSq SINE Alu -12 301 1 310 246 55 55 chr20 55602053 55602163 -11065842 - MIR SINE MIR -61 147 38 187 264 271 0 chr20 55603055 55603184 -11064821 + MIR SINE MIR 99 262 0 2182 118 7 3 chr20 55605392 55605696 -11062309 + AluSq SINE Alu 3 307 -6 724 269 98 67 chr20 55605743 55606129 -11061876 - MLT1J LTR MaLR -11 500 103 245 272 88 48 chr20 55606763 55606910 -11061095 + MIR SINE MIR 98 250 -12 2248 176 9 9 chr20 55607012 55607454 -11060551 - L1MB7 LINE L1 -5 6179 5738 990 219 168 14 chr20 55607454 55607746 -11060259 + MER57A LTR ERV1 1 337 -66 2936 123 60 8 chr20 55607752 55608287 -11059718 + LTR49 LTR ERV1 33 595 0 225 188 116 29 chr20 55609309 55609378 -11058627 - L2 LINE L2 -71 3242 3168 401 289 31 8 chr20 55609454 55609582 -11058423 - L2 LINE L2 0 3313 3183 647 215 140 47 chr20 55609589 55609803 -11058202 - MIR SINE MIR -12 250 17 187 257 106 84 chr20 55609852 55610031 -11057974 - L2 LINE L2 -219 3053 2871 993 201 29 5 chr20 55610584 55610793 -11057212 - MER20 DNA MER1_type -5 214 1 24 32 0 0 chr20 55610944 55610975 -11057030 + AT_rich Low_complexity Low_complexity 1 31 0 269 291 25 0 chr20 55611059 55611138 -11056867 - MIR SINE MIR -93 169 89 1852 150 3 7 chr20 55611652 55611945 -11056060 - AluJb SINE Alu -12 300 9 379 359 28 0 chr20 55611950 55612131 -11055874 + MIR SINE MIR 53 238 -24 2125 94 11 0 chr20 55612285 55612596 -11055409 - AluSg1 SINE Alu 0 314 1 4276 218 161 20 chr20 55613875 55615228 -11052777 + L1MDa LINE L1 17 1574 -4966 700 177 106 81 chr20 55615228 55615294 -11052711 + MER6B DNA MER2_type 5 68 -797 2395 107 0 0 chr20 55615294 55615602 -11052403 - AluSg SINE Alu -2 308 1 700 177 106 81 chr20 55615602 55615733 -11052272 + MER6B DNA MER2_type 68 207 -3 4276 218 161 20 chr20 55615733 55615774 -11052231 + L1MDa LINE L1 1574 1608 -4932 1933 170 47 0 chr20 55615786 55616187 -11051818 + L1MDa LINE L1 1850 2269 -4271 * 2194 167 113 27 chr20 55616184 55616466 -11051539 + L1MD1 LINE L1 5645 5902 -340 2059 104 36 29 chr20 55616466 55616774 -11051231 + AluSg SINE Alu 1 310 0 2194 167 113 27 chr20 55616774 55617042 -11050963 + L1MD1 LINE L1 5902 6242 0 361 271 66 42 chr20 55617177 55617343 -11050662 + MLT1H LTR MaLR 378 547 -2 195 341 44 0 chr20 55617463 55617554 -11050451 - L2 LINE L2 -447 2867 2773 330 282 92 8 chr20 55617732 55617863 -11050142 + L2 LINE L2 3172 3313 0 349 193 50 109 chr20 55617934 55617985 -11050020 - MIR SINE MIR -5 257 205 1593 174 16 30 chr20 55617985 55618289 -11049716 - AluJb SINE Alu -12 300 1 349 193 50 109 chr20 55618289 55618356 -11049649 - MIR SINE MIR -57 205 146 1088 306 97 31 chr20 55618456 55618894 -11049111 + L2 LINE L2 2311 2719 -594 2262 114 0 3 chr20 55618894 55619202 -11048803 - AluSx SINE Alu -5 307 1 1088 306 97 31 chr20 55619202 55619565 -11048440 + L2 LINE L2 2719 3179 -134 366 23 0 0 chr20 55619565 55619608 -11048397 + (CA)n Simple_repeat Simple_repeat 2 44 0 1088 306 97 31 chr20 55619608 55619752 -11048253 + L2 LINE L2 3179 3312 -1 285 303 17 126 chr20 55620256 55620573 -11047432 - L2 LINE L2 -535 2779 2429 1534 194 33 40 chr20 55620573 55621000 -11047005 - LTR37A LTR ERV1 0 426 3 375 23 0 0 chr20 55621007 55621051 -11046954 + (TG)n Simple_repeat Simple_repeat 1 44 0 285 303 17 126 chr20 55621051 55621075 -11046930 - L2 LINE L2 -821 2493 2468 299 281 239 22 chr20 55621240 55621511 -11046494 - L1ME LINE L1 -262 5859 5532 185 214 0 89 chr20 55621937 55621967 -11046038 - MIR3 SINE MIR -35 173 149 3423 163 68 38 chr20 55621967 55622673 -11045332 - LTR8A LTR ERV1 0 727 1 185 214 0 89 chr20 55622673 55622698 -11045307 - MIR3 SINE MIR -59 149 123 612 298 32 28 chr20 55623504 55623752 -11044253 + MIR SINE MIR 12 260 -2 1765 47 0 0 chr20 55623865 55624080 -11043925 - L1PA5 LINE L1 -1 6153 5939 1156 216 9 0 chr20 55624548 55624770 -11043235 + MER58A DNA MER1_type 1 224 0 1109 162 69 15 chr20 55625402 55625606 -11042399 + MER20 DNA MER1_type 1 215 -4 306 0 0 0 chr20 55625695 55625729 -11042276 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 1557 170 19 22 chr20 55625731 55626002 -11042003 - AluJb SINE Alu -42 270 1 252 268 93 11 chr20 55626004 55626187 -11041818 - MER113 DNA MER1_type? -319 202 5 388 290 124 14 chr20 55626644 55626789 -11041216 - MER5A DNA MER1_type -28 161 1 566 250 90 5 chr20 55627011 55627223 -11040782 + Tigger8 DNA MER2_type 319 548 -118 4303 202 19 38 chr20 55627760 55629162 -11038843 - L1MD1 LINE L1 -6 6236 4862 1919 166 13 0 chr20 55629291 55629593 -11038412 - AluSx SINE Alu -6 306 1 21 36 0 0 chr20 55629917 55629945 -11038060 + AT_rich Low_complexity Low_complexity 1 28 0 300 305 61 43 chr20 55630093 55630257 -11037748 - L1ME LINE L1 -367 5795 5629 2456 53 0 0 chr20 55630659 55630960 -11037045 - AluY SINE Alu -10 301 1 2291 93 0 7 chr20 55631081 55631382 -11036623 + AluSg SINE Alu 2 300 -10 207 284 245 0 chr20 55632764 55632866 -11035139 + L2 LINE L2 3139 3265 -7 781 289 204 27 chr20 55634462 55634679 -11033326 + L2 LINE L2 2484 2661 -652 1650 138 107 47 chr20 55634679 55634997 -11033008 - MER1B DNA MER1_type 0 337 1 781 289 204 27 chr20 55634997 55635408 -11032597 + L2 LINE L2 2661 3223 -90 236 265 120 5 chr20 55636744 55636836 -11031169 + MIR SINE MIR 15 116 -92 331 238 66 13 chr20 55637018 55637169 -11030836 - MER103 DNA DNA -7 159 1 280 291 28 84 chr20 55638041 55638084 -11029921 + L2 LINE L2 2340 2384 -930 2313 106 0 3 chr20 55638084 55638387 -11029618 - AluSq SINE Alu -11 302 1 280 291 28 84 chr20 55638387 55638522 -11029483 + L2 LINE L2 2384 2508 -806 189 361 66 6 chr20 55638513 55638679 -11029326 + L2 LINE L2 2922 3097 -175 * 451 236 85 102 chr20 55638875 55639121 -11028884 + MLT1J LTR MaLR 215 456 -55 2308 80 3 7 chr20 55639121 55639422 -11028583 - AluSp SINE Alu -13 300 1 199 398 65 0 chr20 55639571 55639664 -11028341 + L2 LINE L2 3147 3245 -27 1865 167 3 0 chr20 55639878 55640183 -11027822 - AluJo SINE Alu -6 306 1 1604 206 78 2 chr20 55640308 55640730 -11027275 + MLT1C LTR MaLR 1 454 -13 198 0 0 0 chr20 55641130 55641152 -11026853 + (T)n Simple_repeat Simple_repeat 1 22 0 2211 78 7 27 chr20 55641607 55641902 -11026103 + AluY SINE Alu 1 289 -22 277 296 186 30 chr20 55642278 55642545 -11025460 + L2 LINE L2 2749 3063 -250 1957 127 12 3 chr20 55642574 55642896 -11025109 - MER44D DNA MER2_type -2 607 13 709 136 0 0 chr20 55642948 55643051 -11024954 + AluJb SINE Alu 1 103 -209 2835 214 74 34 chr20 55643164 55643206 -11024799 - L1MD2 LINE L1 -251 6108 6069 2207 79 20 10 chr20 55643206 55643498 -11024507 + AluSc SINE Alu 1 295 -14 2835 214 74 34 chr20 55643498 55644072 -11023933 - L1MD2 LINE L1 -290 6069 5519 1673 173 0 18 chr20 55644072 55644356 -11023649 - AluJo SINE Alu -7 305 27 2835 214 74 34 chr20 55644356 55645390 -11022615 - L1MD2 LINE L1 -840 5519 4404 2329 60 0 7 chr20 55646114 55646421 -11021584 + AluY SINE Alu 1 305 0 198 0 0 0 chr20 55646449 55646471 -11021534 + (A)n Simple_repeat Simple_repeat 1 22 0 236 271 51 25 chr20 55646651 55646769 -11021236 - MER94 DNA DNA -9 125 5 312 337 53 11 chr20 55646872 55647136 -11020869 - L1ME LINE L1 -330 5791 5517 206 394 48 0 chr20 55648804 55648908 -11019097 - MER91C DNA MER1_type -1 139 31 829 163 112 51 chr20 55648942 55649138 -11018867 - MER20 DNA MER1_type -11 208 1 237 344 101 25 chr20 55649145 55649463 -11018542 + L2 LINE L2 2689 3017 -255 332 324 65 54 chr20 55649558 55649627 -11018378 + MIR SINE MIR 48 115 -147 2505 57 0 7 chr20 55649627 55649927 -11018078 - AluY SINE Alu -13 298 1 332 324 65 54 chr20 55649927 55650042 -11017963 + MIR SINE MIR 115 234 -28 201 325 33 50 chr20 55650262 55650382 -11017623 + MIR SINE MIR 48 165 -97 705 327 55 19 chr20 55650394 55650816 -11017189 - L2 LINE L2 -9 3304 2868 2316 102 0 7 chr20 55650871 55651175 -11016830 + AluSc SINE Alu 1 302 -7 315 336 79 0 chr20 55652234 55652632 -11015373 + L1MC5 LINE L1 7185 7495 -519 2101 112 0 0 chr20 55652909 55653186 -11014819 - AluSx SINE Alu -15 297 21 305 272 30 41 chr20 55653582 55653751 -11014254 + L1M4 LINE L1 2124 2290 -3856 486 278 99 33 chr20 55653761 55654107 -11013898 + L1ME3 LINE L1 5767 6140 -22 182 379 91 0 chr20 55654566 55654698 -11013307 + MIR SINE MIR 35 178 -84 231 139 0 0 chr20 55655335 55655371 -11012634 - MLT1I LTR MaLR -276 133 98 486 217 45 45 chr20 55656585 55656806 -11011199 + MER113 DNA MER1_type? 44 264 -257 207 69 0 0 chr20 55656812 55656841 -11011164 + (TG)n Simple_repeat Simple_repeat 2 30 0 1929 184 18 15 chr20 55656860 55657251 -11010754 - L1MB1 LINE L1 -8 6396 6005 2729 74 5 5 chr20 55657251 55657623 -11010382 - L1PA7 LINE L1 0 6154 5777 404 62 0 0 chr20 55657624 55657688 -11010317 + L1P LINE L1 5283 5346 -808 * 10408 205 39 45 chr20 55657686 55661346 -11006659 - L1MB1 LINE L1 -386 6018 2365 1531 172 93 34 chr20 55661346 55661637 -11006368 + AluSx SINE Alu 3 310 -2 10408 205 39 45 chr20 55661637 55661998 -11006007 - L1MB1 LINE L1 -4039 2365 2003 299 189 23 30 chr20 55662108 55662240 -11005765 + (TA)n Simple_repeat Simple_repeat 1 131 0 216 0 0 0 chr20 55662240 55662264 -11005741 + (CA)n Simple_repeat Simple_repeat 2 25 0 408 230 0 0 chr20 55662269 55662377 -11005628 - L1MB1 LINE L1 -4502 1926 1706 259 25 50 0 chr20 55662606 55662646 -11005359 + (TG)n Simple_repeat Simple_repeat 1 42 0 477 300 104 27 chr20 55663131 55663305 -11004700 + MIR SINE MIR 18 214 -48 2064 95 53 7 chr20 55663305 55663590 -11004415 + AluSx SINE Alu 1 298 -14 477 300 104 27 chr20 55663590 55663635 -11004370 + MIR SINE MIR 214 254 -8 670 333 115 59 chr20 55663924 55664586 -11003419 - L2 LINE L2 -1 3271 2570 348 259 34 54 chr20 55666511 55666658 -11001347 - MIR SINE MIR -25 237 94 243 258 32 0 chr20 55667359 55667421 -11000584 - MIR SINE MIR -123 139 76 285 116 0 0 chr20 55667654 55667697 -11000308 + MIR SINE MIR 109 151 -111 26 0 0 0 chr20 55667827 55667853 -11000152 + AT_rich Low_complexity Low_complexity 1 26 0 2291 55 31 7 chr20 55670007 55670297 -10997708 - AluY SINE Alu -14 297 1 1057 99 7 0 chr20 55670597 55670739 -10997266 + AluY SINE Alu 156 298 -13 710 164 8 0 chr20 55671011 55671133 -10996872 + AluJ SINE Alu 1 123 -189 3426 96 10 4 chr20 55671136 55671627 -10996378 + L1PA12 LINE L1 5668 6161 -7 1087 170 6 6 chr20 55671703 55671885 -10996120 + AluJ SINE Alu 129 310 -2 26 30 0 0 chr20 55672123 55672156 -10995849 + AT_rich Low_complexity Low_complexity 1 33 0 232 186 17 17 chr20 55672439 55672498 -10995507 + (TG)n Simple_repeat Simple_repeat 1 59 0 2416 62 3 0 chr20 55672525 55672815 -10995190 + AluY SINE Alu 1 291 -20 255 309 186 16 chr20 55673261 55673455 -10994550 + MIR SINE MIR 1 227 -35 591 281 33 28 chr20 55673961 55674197 -10993808 + MIR SINE MIR 1 238 -24 957 168 117 10 chr20 55674691 55674888 -10993117 + MER20 DNA MER1_type 1 218 -1 272 286 140 23 chr20 55674915 55675086 -10992919 - MIR SINE MIR 0 262 72 209 327 65 47 chr20 55676928 55677035 -10990970 - L2 LINE L2 -6 3307 3199 195 171 0 0 chr20 55677038 55677073 -10990932 + L3 LINE CR1 1542 1576 -1 763 299 131 12 chr20 55677259 55677784 -10990221 - L2 LINE L2 0 3313 2728 735 257 39 31 chr20 55677853 55678110 -10989895 - MER77 LTR ERV1 -8 597 339 477 281 146 18 chr20 55678400 55678674 -10989331 - L2 LINE L2 -671 2643 2335 256 326 92 27 chr20 55679627 55679838 -10988167 - MIR SINE MIR 0 262 33 697 251 51 35 chr20 55679902 55680151 -10987854 - MER113 DNA MER1_type? -46 475 217 2141 109 3 0 chr20 55680151 55680434 -10987571 - AluSg1 SINE Alu -23 286 3 697 251 51 35 chr20 55680434 55680559 -10987446 - MER113 DNA MER1_type? -304 217 95 678 191 76 0 chr20 55681033 55681190 -10986815 + MER20 DNA MER1_type 36 204 -15 2607 39 0 3 chr20 55681406 55681712 -10986293 - AluY SINE Alu -6 305 1 22 35 0 0 chr20 55681768 55681797 -10986208 + AT_rich Low_complexity Low_complexity 1 29 0 2231 92 0 14 chr20 55682184 55682479 -10985526 + AluSg1 SINE Alu 1 291 -18 279 79 0 0 chr20 55682490 55682528 -10985477 + (CA)n Simple_repeat Simple_repeat 2 39 0 228 35 0 0 chr20 55682574 55682603 -10985402 + (CA)n Simple_repeat Simple_repeat 2 30 0 183 42 0 0 chr20 55682602 55682626 -10985379 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 416 320 0 8 chr20 55683177 55683302 -10984703 - L2 LINE L2 -4 3309 3186 286 301 102 42 chr20 55683337 55683503 -10984502 - MIR SINE MIR -52 210 35 288 203 0 0 chr20 55684475 55684539 -10983466 + Charlie8 DNA MER1_type 81 144 -2273 306 0 0 0 chr20 55684869 55684903 -10983102 + (TG)n Simple_repeat Simple_repeat 2 35 0 2191 87 7 0 chr20 55685070 55685395 -10982610 + AluSg SINE Alu 1 327 0 2077 114 0 32 chr20 55686120 55686436 -10981569 - AluSx SINE Alu -2 310 5 30 0 0 0 chr20 55686913 55686943 -10981062 + AT_rich Low_complexity Low_complexity 1 30 0 354 273 0 23 chr20 55686956 55687088 -10980917 + (CATATA)n Simple_repeat Simple_repeat 3 131 0 441 288 123 43 chr20 55688313 55688615 -10979390 - MER102b DNA MER1_type -14 327 2 1754 172 3 14 chr20 55688744 55689041 -10978964 + AluJb SINE Alu 1 294 -18 1092 219 40 40 chr20 55689375 55689703 -10978302 - MER58B DNA MER1_type -2 339 12 1061 226 16 55 chr20 55689848 55690157 -10977848 + MLT2B1 LTR ERVL 3 299 -221 505 379 37 0 chr20 55690268 55690511 -10977494 + MIR SINE MIR 11 262 0 433 96 0 24 chr20 55690658 55690741 -10977264 + (TC)n Simple_repeat Simple_repeat 2 82 0 1672 199 0 0 chr20 55691177 55691459 -10976546 + AluJo SINE Alu 1 282 -30 288 200 0 0 chr20 55691461 55691546 -10976459 + (TA)n Simple_repeat Simple_repeat 2 86 0 256 284 29 0 chr20 55691600 55691702 -10976303 - L1ME LINE L1 -456 5665 5561 2025 186 17 85 chr20 55692737 55693095 -10974910 + MLT1D LTR MaLR 1 311 -194 2295 75 32 0 chr20 55693095 55693376 -10974629 + AluSc SINE Alu 1 290 -19 2025 186 17 85 chr20 55693376 55693559 -10974446 + MLT1D LTR MaLR 311 505 0 406 292 21 7 chr20 55693820 55693964 -10974041 + Charlie8 DNA MER1_type 88 233 -2184 1704 224 102 57 chr20 55694029 55694236 -10973769 - MLT1E LTR MaLR -3 590 394 2484 56 0 25 chr20 55694236 55694555 -10973450 - AluY SINE Alu 0 311 1 1704 224 102 57 chr20 55694555 55694794 -10973211 - MLT1E LTR MaLR -199 394 112 1515 172 57 37 chr20 55694794 55695090 -10972915 - AluJo SINE Alu -10 302 1 1704 224 102 57 chr20 55695090 55695200 -10972805 - MLT1E LTR MaLR -481 112 8 264 217 113 96 chr20 55695446 55695561 -10972444 - L2 LINE L2 -2 3270 3154 212 382 44 44 chr20 55695604 55695740 -10972265 - MIR SINE MIR -70 138 9 2111 138 0 3 chr20 55695797 55696108 -10971897 - AluSg SINE Alu 0 310 1 1732 188 3 0 chr20 55696201 55696488 -10971517 + AluJo SINE Alu 1 288 -24 459 0 0 0 chr20 55696489 55696540 -10971465 + (TA)n Simple_repeat Simple_repeat 1 51 0 2295 91 0 0 chr20 55697718 55698003 -10970002 - AluSx SINE Alu -26 286 2 271 328 60 0 chr20 55698111 55698227 -10969778 + L1MC/D LINE L1 5578 5700 -2108 321 327 45 0 chr20 55698253 55698363 -10969642 - L2 LINE L2 0 3272 3158 2299 99 10 0 chr20 55698875 55699167 -10968838 + AluSx SINE Alu 1 295 -17 286 250 24 36 chr20 55699256 55699340 -10968665 - MIR SINE MIR -177 85 3 2193 117 3 3 chr20 55699378 55699687 -10968318 + AluSc SINE Alu 1 309 0 583 286 0 0 chr20 55700378 55700497 -10967508 - MER45 DNA AcHobo -57 121 3 981 191 48 29 chr20 55700574 55700783 -10967222 + MER20 DNA MER1_type 1 213 -6 223 274 224 17 chr20 55700844 55701023 -10966982 + MIR SINE MIR 45 260 -2 2342 107 0 0 chr20 55701036 55701344 -10966661 - AluY SINE Alu -3 308 1 249 277 122 27 chr20 55703012 55703200 -10964805 + MIR SINE MIR 31 236 -26 246 317 77 10 chr20 55703335 55703439 -10964566 - L2 LINE L2 0 3313 3203 195 139 0 0 chr20 55704134 55704170 -10963835 + (CATA)n Simple_repeat Simple_repeat 3 38 0 847 198 109 25 chr20 55704303 55704505 -10963500 + MER58A DNA MER1_type 1 219 -5 283 217 156 0 chr20 55704510 55704619 -10963386 - L1MC/D LINE L1 -297 5824 5706 632 286 39 0 chr20 55705126 55705304 -10962701 - MER5A DNA MER1_type 0 189 5 1836 15 0 5 chr20 55705699 55705904 -10962101 + AluY SINE Alu 108 311 0 1330 300 92 33 chr20 55707023 55708066 -10959939 - L2 LINE L2 0 3313 2188 1296 165 13 13 chr20 55708683 55708907 -10959098 + AluJb SINE Alu 88 311 -1 264 149 0 0 chr20 55708910 55708957 -10959048 + (GGGA)n Simple_repeat Simple_repeat 4 50 0 2397 91 0 0 chr20 55709157 55709465 -10958540 + AluSc SINE Alu 1 308 -1 309 296 49 14 chr20 55709994 55710136 -10957869 - MIR SINE MIR -106 156 10 586 238 85 49 chr20 55710183 55710260 -10957745 + MER5A DNA MER1_type 1 74 -115 2106 101 22 0 chr20 55710260 55710577 -10957428 + AluSq SINE Alu 1 323 0 586 238 85 49 chr20 55710577 55710662 -10957343 + MER5A DNA MER1_type 74 170 -19 2411 54 0 0 chr20 55711903 55712181 -10955824 - AluY SINE Alu -8 303 26 617 194 40 69 chr20 55712241 55712416 -10955589 - L1MB7 LINE L1 -9 6175 6006 5137 143 59 7 chr20 55712421 55713254 -10954751 + MER4D LTR ERV1 6 881 -22 408 208 26 0 chr20 55713256 55713333 -10954672 - L1MB7 LINE L1 -191 5993 5915 1052 191 22 52 chr20 55713333 55713564 -10954441 - MSTD LTR MaLR 0 396 173 3725 158 31 43 chr20 55713585 55714287 -10953718 + LTR8A LTR ERV1 34 727 0 450 180 34 22 chr20 55714313 55714402 -10953603 - MSTD LTR MaLR -338 90 1 339 153 73 69 chr20 55714402 55714529 -10953476 - L1MB7 LINE L1 -259 5919 5780 225 0 0 0 chr20 55715203 55715228 -10952777 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 237 316 90 81 chr20 55715228 55715306 -10952699 - L2 LINE L2 -14 3258 3182 2510 67 0 0 chr20 55715306 55715603 -10952402 + AluY SINE Alu 1 297 -14 237 316 90 81 chr20 55715603 55715847 -10952158 - L2 LINE L2 -90 3182 2933 229 320 13 0 chr20 55715976 55716054 -10951951 + MIR3 SINE MIR 123 201 -7 512 100 0 0 chr20 55716208 55716288 -10951717 - AluSg SINE Alu -1 309 230 1151 108 0 13 chr20 55716289 55716446 -10951559 - AluSg SINE Alu -155 155 1 28 61 0 0 chr20 55717073 55717122 -10950883 + AT_rich Low_complexity Low_complexity 1 49 0 3101 175 32 10 chr20 55717153 55717743 -10950262 - MER6A DNA MER2_type 0 605 3 612 183 0 0 chr20 55718440 55718555 -10949450 + L1MA7 LINE L1 6174 6288 -3 384 22 0 0 chr20 55719002 55719047 -10948958 + (CAT)n Simple_repeat Simple_repeat 2 46 0 2027 127 3 60 chr20 55719887 55720218 -10947787 + AluSx SINE Alu 1 312 0 327 252 148 52 chr20 55720230 55720440 -10947565 - MLT1K LTR MaLR -65 523 294 315 287 0 11 chr20 55720440 55720534 -10947471 - L2 LINE L2 -6 3307 3215 488 295 6 44 chr20 55720594 55720777 -10947228 - MLT1K LTR MaLR -411 177 2 233 323 10 20 chr20 55721261 55721360 -10946645 + MER5A DNA MER1_type 50 147 -42 759 239 6 0 chr20 55721422 55721585 -10946420 + MER5A DNA MER1_type 26 189 0 1942 123 42 7 chr20 55721755 55721888 -10946117 + AluSq SINE Alu 1 128 -185 2653 29 0 7 chr20 55721888 55722195 -10945810 + AluY SINE Alu 1 305 -6 1942 123 42 7 chr20 55722195 55722346 -10945659 + AluSq SINE Alu 128 295 -18 833 31 0 0 chr20 55722463 55722561 -10945444 - AluY SINE Alu -2 309 212 279 0 0 0 chr20 55723391 55723422 -10944583 + (A)n Simple_repeat Simple_repeat 1 31 0 2092 138 7 0 chr20 55723714 55724018 -10943987 - AluJb SINE Alu -6 306 1 2282 108 0 10 chr20 55724690 55724997 -10943008 + AluSq SINE Alu 3 306 -7 430 289 32 13 chr20 55725173 55725329 -10942676 - MER103 DNA DNA -7 159 1 282 331 65 6 chr20 55725454 55725623 -10942382 - MIR SINE MIR -19 243 65 674 306 144 25 chr20 55725664 55726289 -10941716 - L2 LINE L2 -1 3312 2616 218 344 19 39 chr20 55726549 55726703 -10941302 - MIR SINE MIR -41 221 71 1021 167 0 0 chr20 55726706 55726868 -10941137 + AluJo SINE Alu 102 263 -49 207 0 0 0 chr20 55726882 55726905 -10941100 + (TAAAA)n Simple_repeat Simple_repeat 3 25 0 927 239 52 5 chr20 55727146 55727359 -10940646 + MER58A DNA MER1_type 1 223 -1 213 306 74 33 chr20 55728769 55728890 -10939115 - L2 LINE L2 -2 3311 3186 450 119 0 0 chr20 55729075 55729142 -10938863 - MER53 DNA DNA -3 186 120 542 274 48 48 chr20 55729738 55729968 -10938037 - MIR SINE MIR -21 241 12 656 175 113 73 chr20 55729982 55730087 -10937918 - MER58A DNA MER1_type -2197 223 107 2367 95 0 19 chr20 55730087 55730403 -10937602 - AluSx SINE Alu -2 310 1 656 175 113 73 chr20 55730403 55730474 -10937531 - MER58A DNA MER1_type -2313 107 40 21 36 0 0 chr20 55732227 55732255 -10935750 + AT_rich Low_complexity Low_complexity 1 28 0 1836 155 145 18 chr20 55732341 55732721 -10935284 + MSTA LTR MaLR 1 428 0 1298 250 74 16 chr20 55732763 55733195 -10934810 + HERVL74 LTR ERVL 1125 1581 -4104 514 248 53 34 chr20 55733220 55733486 -10934519 - L1M4 LINE L1 -2681 3465 3195 2150 158 33 23 chr20 55733496 55733628 -10934377 - L1PB4 LINE L1 -4 6152 6021 3075 153 37 30 chr20 55733628 55734198 -10933807 - L1PB4 LINE L1 -280 6025 5480 2344 90 0 3 chr20 55734198 55734497 -10933508 - AluSg SINE Alu -12 298 1 3075 153 37 30 chr20 55734497 55734760 -10933245 - L1PB4 LINE L1 -825 5480 5220 840 247 0 0 chr20 55734956 55735122 -10932883 + MER58A DNA MER1_type 1 166 0 183 80 0 0 chr20 55735459 55735484 -10932521 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 1200 183 126 34 chr20 55735487 55735750 -10932255 - AluJo SINE Alu -25 287 1 280 351 30 22 chr20 55735837 55735971 -10932034 + L2 LINE L2 3138 3272 0 199 261 22 0 chr20 55736229 55736275 -10931730 - MIR SINE MIR -196 66 20 2308 241 32 16 chr20 55736285 55736841 -10931164 + MER119 DNA MER1_type 5 569 -14 1611 217 33 0 chr20 55736938 55737242 -10930763 + MER45B DNA AcHobo 1 314 -726 1774 122 26 50 chr20 55737244 55737593 -10930412 + MER4A LTR ERV1 1 471 -193 2253 90 40 3 chr20 55737593 55737892 -10930113 - AluSg SINE Alu 0 310 1 1774 122 26 50 chr20 55737892 55738080 -10929925 + MER4A LTR ERV1 471 662 -2 2129 208 63 17 chr20 55738081 55738324 -10929681 + MER45B DNA AcHobo 313 543 -1038 3964 114 84 0 chr20 55738324 55738910 -10929095 - MER41B LTR ERV1 0 635 1 2129 208 63 17 chr20 55738910 55739336 -10928669 + MER45B DNA AcHobo 543 1040 0 1335 207 126 36 chr20 55741064 55741509 -10926496 - MER39 LTR ERV1 0 707 223 228 127 91 91 chr20 55741493 55741548 -10926457 - MER21A LTR ERV1 -758 173 119 * 288 209 47 58 chr20 55741518 55741604 -10926401 - LTR48B LTR ERV1 -556 88 4 2132 106 0 0 chr20 55741627 55741902 -10926103 + AluSc SINE Alu 1 275 -34 461 227 56 86 chr20 55742674 55742954 -10925051 - Charlie8 DNA MER1_type -1000 1417 72 21 0 0 0 chr20 55743092 55743113 -10924892 + AT_rich Low_complexity Low_complexity 1 21 0 306 281 92 30 chr20 55743729 55743893 -10924112 + MIR SINE MIR 25 198 -64 2187 150 30 22 chr20 55743962 55744323 -10923682 + THE1B LTR MaLR 1 364 0 974 195 101 109 chr20 55744327 55744665 -10923340 - MER39 LTR ERV1 0 707 373 280 215 71 36 chr20 55744718 55744823 -10923182 - LTR48B LTR ERV1 -508 114 1 912 228 48 37 chr20 55744976 55745244 -10922761 - L1ME1 LINE L1 -5 6161 5891 535 201 106 62 chr20 55745251 55745430 -10922575 - MER112 DNA MER1_type -40 220 34 379 268 106 14 chr20 55745567 55745709 -10922296 - MIR SINE MIR -65 197 43 272 313 31 16 chr20 55745926 55746054 -10921951 + MIR3 SINE MIR 13 142 -66 597 232 30 30 chr20 55746092 55746256 -10921749 - MER20 DNA MER1_type -2 217 54 641 206 0 22 chr20 55746300 55746436 -10921569 + FLAM_A SINE Alu 1 133 0 309 180 0 0 chr20 55746469 55746519 -10921486 + L1MA4A LINE L1 5131 5180 -966 574 231 29 134 chr20 55746677 55746833 -10921172 + MIR SINE MIR 15 131 -131 2439 71 0 16 chr20 55746833 55747144 -10920861 + AluY SINE Alu 1 306 -5 574 231 29 134 chr20 55747144 55747264 -10920741 + MIR SINE MIR 131 262 0 430 236 18 27 chr20 55747321 55747431 -10920574 - MER81 DNA DNA -5 109 1 2207 142 32 18 chr20 55747524 55747645 -10920360 + L1MA4A LINE L1 5708 5826 -477 1784 109 95 18 chr20 55747645 55747930 -10920075 + AluSg SINE Alu 1 307 -3 2207 142 32 18 chr20 55747930 55748313 -10919692 + L1MA4A LINE L1 5826 6280 -23 446 294 83 58 chr20 55748880 55749365 -10918640 + MLT1J LTR MaLR 8 504 -7 270 0 0 0 chr20 55749449 55749479 -10918526 + (TG)n Simple_repeat Simple_repeat 1 30 0 712 211 189 61 chr20 55749519 55749574 -10918431 - ORSL DNA AcHobo 0 275 228 1603 160 62 0 chr20 55749574 55749849 -10918156 - AluJb SINE Alu -18 294 3 712 211 189 61 chr20 55749849 55750021 -10917984 - ORSL DNA AcHobo -47 228 19 195 320 90 0 chr20 55750328 55750406 -10917599 + MIR SINE MIR 175 259 -3 2232 122 64 25 chr20 55751699 55752060 -10915945 + THE1C LTR MaLR 1 375 0 257 282 24 73 chr20 55752285 55752409 -10915596 + MIR SINE MIR 81 198 -64 799 269 18 0 chr20 55752515 55752686 -10915319 + MER45A DNA AcHobo 1 174 -4 297 298 44 0 chr20 55752836 55752950 -10915055 - MIR SINE MIR -71 191 73 2833 10 0 0 chr20 55753588 55753892 -10914113 - AluYa5 SINE Alu -7 304 1 304 323 21 0 chr20 55754269 55754362 -10913643 - L3 LINE CR1 -73 1504 1410 195 186 0 0 chr20 55754398 55754441 -10913564 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 600 286 207 11 chr20 55754441 55755068 -10912937 - L2 LINE L2 0 3313 2583 199 339 0 15 chr20 55756180 55756245 -10911760 - L2 LINE L2 -91 3222 3159 917 198 0 0 chr20 55756403 55756560 -10911445 - FRAM SINE Alu -20 156 1 766 147 9 0 chr20 55756703 55756812 -10911193 + FLAM_C SINE Alu 12 121 -22 195 42 0 0 chr20 55757138 55757162 -10910843 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2202 40 0 37 chr20 55757170 55757443 -10910562 - AluY SINE Alu -48 263 1 813 142 16 16 chr20 55757662 55757789 -10910216 + FLAM_A SINE Alu 13 139 -3 261 247 113 10 chr20 55757796 55757893 -10910112 - Charlie8 DNA MER1_type -2278 139 33 186 209 0 0 chr20 55759244 55759287 -10908718 + T-rich Low_complexity Low_complexity 1 43 0 721 314 181 15 chr20 55760934 55761469 -10906536 - L2 LINE L2 -2 3311 2690 216 356 9 17 chr20 55761501 55761616 -10906389 + (TATATG)n Simple_repeat Simple_repeat 2 115 0 264 122 0 0 chr20 55762125 55762166 -10905839 + (TG)n Simple_repeat Simple_repeat 1 41 0 1003 234 38 81 chr20 55763210 55763582 -10904423 - L1MB8 LINE L1 -6 6172 5817 2409 138 56 19 chr20 55764119 55764532 -10903473 + MSTC LTR MaLR 1 428 0 245 215 15 0 chr20 55764771 55764836 -10903169 + (TAA)n Simple_repeat Simple_repeat 2 67 0 351 235 24 12 chr20 55764839 55764924 -10903081 - MIR SINE MIR -27 235 150 200 273 45 15 chr20 55764934 55765000 -10903005 + L2 LINE L2 3161 3228 -44 349 296 16 32 chr20 55765041 55765166 -10902839 - MIR SINE MIR -122 140 18 1050 168 0 0 chr20 55765193 55765354 -10902651 - FRAM SINE Alu -23 153 1 2153 111 0 4 chr20 55765366 55765646 -10902359 - AluSq SINE Alu -24 289 11 453 202 112 79 chr20 55765999 55766177 -10901828 - MLT1E LTR MaLR -408 185 2 636 250 104 5 chr20 55766423 55766635 -10901370 + MIR SINE MIR 1 233 -29 1710 181 24 0 chr20 55766725 55767012 -10900993 - AluJb SINE Alu -18 294 1 1906 150 0 24 chr20 55767047 55767341 -10900664 - AluSx SINE Alu -25 287 1 618 269 7 0 chr20 55767502 55767651 -10900354 - L1MA10 LINE L1 -5 6329 6180 25 0 0 0 chr20 55767668 55767693 -10900312 + AT_rich Low_complexity Low_complexity 1 25 0 600 250 8 0 chr20 55767730 55767862 -10900143 - L1MB1 LINE L1 -12 6177 6045 246 95 0 0 chr20 55768267 55768309 -10899696 + (TA)n Simple_repeat Simple_repeat 2 43 0 2042 139 0 19 chr20 55768381 55768690 -10899315 - AluSq SINE Alu -10 303 1 244 286 86 0 chr20 55769157 55769227 -10898778 + MIR SINE MIR 157 232 -30 327 65 0 0 chr20 55769251 55769297 -10898708 + (TG)n Simple_repeat Simple_repeat 2 47 0 1510 187 169 49 chr20 55771468 55771794 -10896211 - MLT1D LTR MaLR -2 503 107 2476 109 19 25 chr20 55771794 55772160 -10895845 - THE1B LTR MaLR 0 364 1 1510 187 169 49 chr20 55772160 55772282 -10895723 - MLT1D LTR MaLR -398 107 1 233 324 20 34 chr20 55772803 55772951 -10895054 + MIR SINE MIR 8 153 -109 1544 195 43 45 chr20 55773553 55773927 -10894078 + MLT1B LTR MaLR 3 375 -15 1973 112 35 14 chr20 55773980 55774267 -10893738 + AluSx SINE Alu 3 295 -17 2085 154 36 33 chr20 55774277 55774640 -10893365 + THE1B LTR MaLR 1 364 0 433 325 73 15 chr20 55774642 55774848 -10893157 - MIR SINE MIR -31 231 14 494 314 93 35 chr20 55774886 55775198 -10892807 - MER102b DNA MER1_type -11 330 1 2208 114 0 10 chr20 55775267 55775564 -10892441 - AluSp SINE Alu -19 294 1 243 390 48 0 chr20 55775931 55776036 -10891969 - L2 LINE L2 -31 3241 3132 420 261 185 6 chr20 55776396 55776553 -10891452 - MLT1K LTR MaLR -2 586 402 255 331 117 31 chr20 55776581 55776738 -10891267 - MLT1K LTR MaLR -244 344 174 1380 289 109 23 chr20 55776738 55777270 -10890735 + MLT1G1 LTR MaLR 1 578 -17 233 209 15 30 chr20 55778679 55778746 -10889259 + (TATATG)n Simple_repeat Simple_repeat 2 67 0 2233 116 7 0 chr20 55778946 55779248 -10888757 + AluSq SINE Alu 1 304 -9 2292 95 0 0 chr20 55779756 55780051 -10887954 - AluSg SINE Alu -15 295 1 362 248 38 60 chr20 55780531 55780664 -10887341 - L1ME LINE L1 -5935 135 6 237 163 0 0 chr20 55780934 55780983 -10887022 + CT-rich Low_complexity Low_complexity 2 50 0 231 36 0 0 chr20 55781218 55781246 -10886759 + (T)n Simple_repeat Simple_repeat 1 28 0 266 262 0 24 chr20 55782131 55782215 -10885790 + CT-rich Low_complexity Low_complexity 2 83 0 2300 113 0 0 chr20 55782217 55782528 -10885477 - AluSx SINE Alu -1 311 1 2298 73 0 14 chr20 55783002 55783323 -10884682 - AluY SINE Alu 0 317 1 873 122 15 0 chr20 55783645 55783776 -10884229 + AluSg/x SINE Alu 173 305 -5 1256 239 30 27 chr20 55784969 55785299 -10882706 - MER58B DNA MER1_type 0 341 11 223 343 14 0 chr20 55785501 55785574 -10882431 + L3 LINE CR1 209 282 -1295 1692 202 69 16 chr20 55785980 55786356 -10881649 - MSTD LTR MaLR 0 396 1 22 35 0 0 chr20 55787403 55787432 -10880573 + AT_rich Low_complexity Low_complexity 1 29 0 825 180 0 0 chr20 55789448 55789570 -10878435 + FLAM_A SINE Alu 1 122 -11 416 222 198 36 chr20 55789817 55789984 -10878021 - MLT1K LTR MaLR -3 585 392 2253 153 7 50 chr20 55790341 55790745 -10877260 + MLT1B LTR MaLR 4 390 0 27 29 0 0 chr20 55791649 55791683 -10876322 + AT_rich Low_complexity Low_complexity 1 34 0 24 53 0 0 chr20 55791858 55791896 -10876109 + AT_rich Low_complexity Low_complexity 1 38 0 292 292 75 34 chr20 55791957 55792221 -10875784 - L1MC/D LINE L1 -495 5626 5506 378 263 108 62 chr20 55792243 55792437 -10875568 - MIR SINE MIR -51 211 9 1821 207 100 31 chr20 55792569 55792990 -10875015 + MLT2B1 LTR ERVL 3 452 -68 223 100 0 40 chr20 55793001 55793051 -10874954 + (TC)n Simple_repeat Simple_repeat 1 48 0 255 220 34 0 chr20 55794594 55794653 -10873352 - MIR SINE MIR -116 146 86 2430 113 51 25 chr20 55794664 55795019 -10872986 - THE1B LTR MaLR 0 364 1 1312 7 0 0 chr20 55796063 55796209 -10871796 - L1P1 LINE L1 -339 5816 5671 2227 28 0 0 chr20 55796209 55796453 -10871552 + L1PA2 LINE L1 5909 6155 0 228 175 0 0 chr20 55796460 55796523 -10871482 + A-rich Low_complexity Low_complexity 1 63 0 778 86 0 0 chr20 55796604 55796709 -10871296 - AluY SINE Alu -3 308 204 370 358 13 0 chr20 55796719 55796870 -10871135 + MIR SINE MIR 110 262 0 23 0 0 0 chr20 55796991 55797014 -10870991 + AT_rich Low_complexity Low_complexity 1 23 0 433 212 27 49 chr20 55797326 55797510 -10870495 + (TA)n Simple_repeat Simple_repeat 1 180 0 270 310 71 42 chr20 55797858 55798097 -10869908 - L1ME LINE L1 -295 5867 5622 237 293 21 32 chr20 55798493 55798635 -10869370 - L1ME4a LINE L1 -43 6078 5936 526 196 33 0 chr20 55798648 55798740 -10869265 - FRAM SINE Alu -15 161 67 2167 113 0 3 chr20 55799798 55800098 -10867907 + AluY SINE Alu 1 299 -12 413 341 48 16 chr20 55800176 55800425 -10867580 - MIR SINE MIR -4 258 2 207 0 0 0 chr20 55801086 55801109 -10866896 + (TG)n Simple_repeat Simple_repeat 2 24 0 2232 133 30 0 chr20 55801343 55801710 -10866295 + L1MA8 LINE L1 5545 5922 -369 6744 65 11 11 chr20 55801722 55802852 -10865153 - L1PA8 LINE L1 -2 6170 5057 853 83 0 0 chr20 55802852 55802972 -10865033 + L1PA8 LINE L1 4950 5069 -1077 2028 117 37 29 chr20 55802972 55803343 -10864662 + L1MA8 LINE L1 5910 6288 -3 462 316 114 22 chr20 55803820 55804048 -10863957 + MIR SINE MIR 8 256 -6 2474 77 0 3 chr20 55805707 55806017 -10861988 + AluY SINE Alu 1 309 -2 325 231 0 66 chr20 55806036 55806127 -10861878 + L2 LINE L2 3184 3268 -4 234 0 0 0 chr20 55806237 55806263 -10861742 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 651 175 71 84 chr20 55806266 55806420 -10861585 - FRAM SINE Alu -14 152 1 251 241 0 0 chr20 55806557 55806611 -10861394 - L2 LINE L2 -3 3310 3257 571 309 99 24 chr20 55806792 55807125 -10860880 + LTR16C LTR ERVL 121 478 -13 381 349 0 0 chr20 55807137 55807263 -10860742 - MIR SINE MIR -106 156 31 471 287 97 28 chr20 55807573 55807789 -10860216 - MIR SINE MIR 0 262 32 207 258 15 15 chr20 55808196 55808262 -10859743 + (TA)n Simple_repeat Simple_repeat 1 66 0 465 295 0 9 chr20 55808627 55808739 -10859266 - L2 LINE L2 -11 3302 3192 186 395 18 18 chr20 55808778 55808866 -10859139 - MIR SINE MIR -63 145 55 2165 106 0 29 chr20 55808866 55809178 -10858827 - AluSg1 SINE Alu -6 303 1 186 395 18 18 chr20 55809178 55809203 -10858802 - MIR SINE MIR -152 56 32 2178 97 7 13 chr20 55809273 55809571 -10858434 + AluSq SINE Alu 1 296 -17 258 284 0 0 chr20 55809697 55809764 -10858241 + MER112 DNA MER1_type 18 84 -176 225 178 0 0 chr20 55809774 55809819 -10858186 + (TATG)n Simple_repeat Simple_repeat 3 47 0 1767 184 23 25 chr20 55810077 55810431 -10857574 + MLT1A1 LTR MaLR 13 365 0 23 33 0 0 chr20 55810640 55810670 -10857335 + AT_rich Low_complexity Low_complexity 1 30 0 226 386 85 20 chr20 55810760 55811119 -10856886 - L2 LINE L2 -250 3022 2642 736 328 64 58 chr20 55812028 55812212 -10855793 - MLT1K LTR MaLR -2 586 405 249 33 0 0 chr20 55812212 55812242 -10855763 + (TG)n Simple_repeat Simple_repeat 2 31 0 736 328 64 58 chr20 55812242 55812572 -10855433 - MLT1K LTR MaLR -183 405 69 681 316 32 4 chr20 55813230 55813477 -10854528 + MIR SINE MIR 8 261 -1 25 31 0 0 chr20 55814421 55814453 -10853552 + AT_rich Low_complexity Low_complexity 1 32 0 5488 99 70 1 chr20 55814560 55815948 -10852057 + L1PA13 LINE L1 4705 6159 -4 190 116 47 0 chr20 55816175 55816218 -10851787 + (TATATG)n Simple_repeat Simple_repeat 2 46 0 801 100 23 0 chr20 55816615 55816745 -10851260 - L1MA7 LINE L1 -6 6285 6153 326 224 168 0 chr20 55816756 55816899 -10851106 - MER113 DNA MER1_type? -182 339 173 199 333 38 29 chr20 55817361 55817466 -10850539 + L2 LINE L2 3208 3313 0 28 0 0 0 chr20 55817604 55817632 -10850373 + AT_rich Low_complexity Low_complexity 1 28 0 2111 25 0 0 chr20 55817702 55817940 -10850065 - AluYb8 SINE Alu 0 318 81 1540 171 37 57 chr20 55819140 55819439 -10848566 + AluJo SINE Alu 1 293 -19 325 341 41 18 chr20 55819567 55819787 -10848218 - MLT1J LTR MaLR -50 461 237 331 290 43 10 chr20 55820308 55820453 -10847552 + MIR SINE MIR 36 224 -38 207 263 163 38 chr20 55820551 55820631 -10847374 + L2 LINE L2 3183 3272 0 221 207 35 0 chr20 55820779 55820837 -10847168 + (TATATG)n Simple_repeat Simple_repeat 3 62 0 443 47 0 0 chr20 55821096 55821160 -10846845 + L1MA7 LINE L1 6222 6285 -6 28 29 0 0 chr20 55821170 55821205 -10846800 + AT_rich Low_complexity Low_complexity 1 35 0 611 258 148 44 chr20 55821308 55821537 -10846468 + MIR SINE MIR 3 255 -7 3741 194 49 20 chr20 55823002 55823978 -10844027 + L1MB7 LINE L1 5159 6175 -9 22 0 0 0 chr20 55824005 55824027 -10843978 + AT_rich Low_complexity Low_complexity 1 22 0 1646 185 73 126 chr20 55824277 55825031 -10842974 - LTR8A LTR ERV1 0 727 1 1173 270 84 41 chr20 55825031 55825514 -10842491 - L1ME3 LINE L1 -16 6146 5634 2405 188 5 2 chr20 55825514 55825939 -10842066 - MSTB LTR MaLR 0 426 1 1173 270 84 41 chr20 55825939 55826014 -10841991 - L1ME3 LINE L1 -528 5634 5564 917 86 0 36 chr20 55826191 55826274 -10841731 + Tigger5 DNA MER2_type 2064 2142 -181 1943 155 10 102 chr20 55826274 55826764 -10841241 - MER65A LTR ERV1 0 445 1 917 86 0 36 chr20 55826764 55826820 -10841185 + Tigger5 DNA MER2_type 2142 2198 -125 1080 230 27 19 chr20 55826824 55827081 -10840924 - LTR48B LTR ERV1 0 644 386 1418 188 193 12 chr20 55827081 55827486 -10840519 - LTR48 LTR ERV1 -306 481 4 657 206 0 8 chr20 55827489 55827615 -10840390 + Tigger5 DNA MER2_type 2199 2323 0 2014 163 6 6 chr20 55827660 55827992 -10840013 + MER72 LTR ERV1 1 332 -390 1778 135 14 21 chr20 55827991 55828077 -10839928 + MER72 LTR ERV1 436 521 -201 * 2080 129 137 8 chr20 55828077 55828456 -10839549 - MSTA LTR MaLR 0 428 1 1778 135 14 21 chr20 55828456 55828658 -10839347 + MER72 LTR ERV1 521 722 0 1063 196 159 96 chr20 55828818 55829183 -10838822 + MLT1C LTR MaLR 1 400 -67 2023 145 0 3 chr20 55829183 55829479 -10838526 + AluSx SINE Alu 1 295 -17 1063 196 159 96 chr20 55829479 55829552 -10838453 + MLT1C LTR MaLR 400 467 0 245 128 0 0 chr20 55829698 55829737 -10838268 - L1MC4 LINE L1 -2 8040 8002 * 774 251 36 5 chr20 55829723 55829918 -10838087 + L1MC/D LINE L1 7 207 -6333 775 251 12 25 chr20 55829920 55830163 -10837842 + L1MC/D LINE L1 5270 5509 -1031 5973 68 1 0 chr20 55830163 55830952 -10837053 - L1PA5 LINE L1 -3829 2317 1528 23890 46 1 2 chr20 55830952 55834750 -10833255 + L1PA5 LINE L1 2342 6150 -4 943 180 67 15 chr20 55834762 55835116 -10832889 + L1MC/D LINE L1 5516 5884 -743 * 2796 231 109 38 chr20 55835109 55837417 -10830588 - L1MCb LINE L1 -3984 2580 8 4023 194 70 39 chr20 55837448 55838173 -10829832 + L1MD1 LINE L1 4849 5550 -692 196 30 61 0 chr20 55838173 55838206 -10829799 + A-rich Low_complexity Low_complexity 17 51 0 1786 179 10 0 chr20 55838210 55838507 -10829498 + AluJo SINE Alu 1 300 -12 4023 194 70 39 chr20 55838507 55839129 -10828876 + L1MD1 LINE L1 5552 6242 0 2322 103 0 3 chr20 55839383 55839693 -10828312 + AluSc SINE Alu 1 309 0 1861 215 120 66 chr20 55839722 55840330 -10827675 - L1MC4 LINE L1 -29 8013 7358 2206 95 3 0 chr20 55840330 55840660 -10827345 + AluSq SINE Alu 1 331 0 1861 215 120 66 chr20 55840660 55840766 -10827239 - L1MC4 LINE L1 -684 7358 7259 2265 238 21 21 chr20 55841078 55841608 -10826397 + LTR31 LTR ERV1 75 604 -15 345 366 23 8 chr20 55841635 55841766 -10826239 - L2 LINE L2 -532 2782 2650 391 266 18 18 chr20 55841935 55842044 -10825961 - L2 LINE L2 -4 3309 3201 44 94 0 0 chr20 55842052 55842180 -10825825 + AT_rich Low_complexity Low_complexity 1 128 0 387 366 54 9 chr20 55843059 55843280 -10824725 + MIR SINE MIR 1 231 -31 282 255 61 31 chr20 55843346 55843444 -10824561 - L1ME LINE L1 -521 5600 5500 230 378 8 8 chr20 55843497 55843616 -10824389 - L2 LINE L2 -8 3305 3187 840 149 6 17 chr20 55844193 55844374 -10823631 + CT-rich Low_complexity Low_complexity 1 179 0 2277 116 22 22 chr20 55845583 55845946 -10822059 + THE1B LTR MaLR 1 363 -1 920 154 77 5 chr20 55846565 55846760 -10821245 - L1PA13 LINE L1 -3 6160 5952 180 0 0 0 chr20 55846761 55846781 -10821224 + (T)n Simple_repeat Simple_repeat 1 20 0 228 111 0 0 chr20 55846885 55846921 -10821084 + (CA)n Simple_repeat Simple_repeat 2 37 0 598 304 32 9 chr20 55847293 55847510 -10820495 - MIR SINE MIR -35 227 6 25 31 0 0 chr20 55847616 55847648 -10820357 + AT_rich Low_complexity Low_complexity 1 32 0 551 259 27 123 chr20 55847707 55847935 -10820070 - MLT1K LTR MaLR -16 572 397 2372 64 0 0 chr20 55847935 55848241 -10819764 - AluY SINE Alu 0 306 1 551 259 27 123 chr20 55848241 55848416 -10819589 - MLT1K LTR MaLR -191 397 207 335 300 174 16 chr20 55849634 55849824 -10818181 + MIR SINE MIR 15 234 -28 358 322 88 24 chr20 55849853 55850058 -10817947 - MIR SINE MIR -13 249 32 454 157 0 0 chr20 55850632 55850702 -10817303 + AluS SINE Alu 25 94 -219 1902 167 0 0 chr20 55850741 55851023 -10816982 + AluSx SINE Alu 1 282 -30 1003 316 77 0 chr20 55851057 55851421 -10816584 - MLT1E LTR MaLR -51 542 151 2223 123 0 0 chr20 55851423 55851723 -10816282 + AluSx SINE Alu 1 300 -12 675 292 108 47 chr20 55851990 55852442 -10815563 - MLT1L LTR MaLR -90 525 46 272 316 0 0 chr20 55852444 55852523 -10815482 + (TG)n Simple_repeat Simple_repeat 2 80 0 323 276 161 42 chr20 55852611 55852803 -10815202 + MIR SINE MIR 36 250 -12 256 243 68 0 chr20 55853611 55853685 -10814320 - MLT1K LTR MaLR -4 584 506 920 249 42 26 chr20 55853852 55854238 -10813767 + L1M4 LINE L1 4381 4772 -1374 232 217 0 0 chr20 55854741 55854787 -10813218 - ORSL DNA AcHobo 0 275 230 833 116 7 45 chr20 55854798 55854953 -10813052 - L1PA15 LINE L1 0 6165 6017 1182 240 67 17 chr20 55854976 55855322 -10812683 - MLT1A2 LTR MaLR -11 363 1 355 227 52 0 chr20 55855783 55855880 -10812125 - MLT1E3 LTR MaLR 0 624 523 1745 166 41 3 chr20 55855898 55856236 -10811769 - MER34B LTR ERV1 -29 536 186 296 259 62 0 chr20 55856276 55856357 -10811648 - MLT1K LTR MaLR -400 224 139 393 242 32 73 chr20 55856657 55856781 -10811224 + MIR SINE MIR 4 122 -140 298 254 8 92 chr20 55857205 55857335 -10810670 + MIR SINE MIR 97 215 -47 1153 128 5 0 chr20 55858378 55858566 -10809439 - L1MA2 LINE L1 0 6304 6116 639 200 45 30 chr20 55858980 55859204 -10808801 - L1ME LINE L1 -699 5534 5307 431 305 53 5 chr20 55859236 55859423 -10808582 + L1M4 LINE L1 4880 5075 -1071 568 276 53 4 chr20 55859558 55859823 -10808182 - L1ME LINE L1 -1513 4702 4425 40608 35 25 1 chr20 55859976 55865815 -10802190 + L1PA3 LINE L1 1 5976 -179 15654 233 25 25 chr20 55865852 55866160 -10801845 - L1P4 LINE L1 -717 6886 6580 2353 53 7 13 chr20 55866160 55866461 -10801544 - AluY SINE Alu -12 299 1 15654 233 25 25 chr20 55866461 55867279 -10800726 - L1P4 LINE L1 -1023 6580 5764 854 142 0 15 chr20 55867279 55867413 -10800592 + FLAM_C SINE Alu 1 132 -1 15654 233 25 25 chr20 55867413 55872871 -10795134 - L1P4 LINE L1 -1839 5764 24 27 0 0 0 chr20 55872920 55872947 -10795058 + AT_rich Low_complexity Low_complexity 1 27 0 617 316 45 41 chr20 55873048 55873653 -10794352 - L1ME LINE L1 -4409 1987 1381 500 181 62 34 chr20 55873647 55873824 -10794181 - L1M4 LINE L1 -1652 4494 4313 * 2268 263 110 20 chr20 55873914 55874196 -10793809 - L1MEc LINE L1 -4267 2129 1874 2314 115 0 0 chr20 55874196 55874500 -10793505 + AluSx SINE Alu 1 304 -8 2268 263 110 20 chr20 55874500 55875541 -10792464 - L1MEc LINE L1 -4522 1874 686 4802 91 38 4 chr20 55875564 55876271 -10791734 - L1PA10 LINE L1 0 6168 5438 4051 119 14 9 chr20 55876271 55876934 -10791071 + L1P LINE L1 3992 4657 -1489 1850 137 74 47 chr20 55876959 55877324 -10790681 + THE1C LTR MaLR 1 375 0 24 32 0 0 chr20 55877337 55877368 -10790637 + AT_rich Low_complexity Low_complexity 1 31 0 272 235 188 0 chr20 55878097 55878182 -10789823 + MER5A DNA MER1_type 9 109 -80 195 324 0 0 chr20 55878247 55878315 -10789690 + MER5B DNA MER1_type 1 68 -110 319 208 10 20 chr20 55878499 55878600 -10789405 + (TATG)n Simple_repeat Simple_repeat 3 102 0 280 244 58 47 chr20 55878720 55878806 -10789199 - MIR SINE MIR -3 259 173 283 195 41 0 chr20 55878826 55878949 -10789056 + (TA)n Simple_repeat Simple_repeat 2 129 0 197 278 22 100 chr20 55879209 55879299 -10788706 + L2 LINE L2 3143 3225 -47 2339 85 0 16 chr20 55879338 55879645 -10788360 - AluY SINE Alu -9 302 1 533 243 162 0 chr20 55879776 55879924 -10788081 - MER5A DNA MER1_type 0 189 18 336 289 12 0 chr20 55880027 55880110 -10787895 - L2 LINE L2 -1 3312 3229 294 250 35 60 chr20 55880160 55880276 -10787729 + MIR SINE MIR 147 259 -3 199 62 0 31 chr20 55880648 55880680 -10787325 - L2 LINE L2 -4 3309 3279 2222 123 3 0 chr20 55880809 55881117 -10786888 - AluSx SINE Alu -3 309 1 275 306 172 29 chr20 55881692 55881901 -10786104 - L2 LINE L2 -213 3059 2821 570 312 83 0 chr20 55882019 55882285 -10785720 - LTR16A1 LTR ERVL -2 455 168 595 277 7 14 chr20 55882580 55882728 -10785277 + MER5B DNA MER1_type 10 156 -22 2312 105 0 0 chr20 55882789 55883094 -10784911 + AluSg SINE Alu 1 305 -5 455 306 103 37 chr20 55883500 55883742 -10784263 + MIR SINE MIR 5 262 0 308 286 103 32 chr20 55884547 55884673 -10783332 - MIR SINE MIR -79 183 49 241 270 35 15 chr20 55885185 55885385 -10782620 - HAL1 LINE L1 -1187 1320 1117 287 195 24 61 chr20 55886002 55886084 -10781921 + MLT1L LTR MaLR 1 79 -536 277 294 89 44 chr20 55886262 55886510 -10781495 + MLT1J LTR MaLR 245 503 -8 803 229 5 26 chr20 55886543 55886735 -10781270 + MER5A DNA MER1_type 2 189 0 21 0 0 0 chr20 55887106 55887127 -10780878 + AT_rich Low_complexity Low_complexity 1 21 0 11883 21 1 3 chr20 55888317 55890488 -10777517 - L1PA3 LINE L1 0 6155 3989 328 304 70 57 chr20 55890829 55891056 -10776949 - L1ME LINE L1 -326 5795 5566 1242 159 34 128 chr20 55891061 55891412 -10776593 - AluYb8 SINE Alu 0 318 1 2276 99 7 0 chr20 55891647 55891940 -10776065 + AluSg SINE Alu 1 295 -15 7070 50 9 5 chr20 55892225 55893801 -10774204 + L1PA7 LINE L1 4571 6154 0 2225 128 0 0 chr20 55894149 55894446 -10773559 - AluSx SINE Alu -11 301 5 304 335 33 26 chr20 55894769 55894921 -10773084 + L3 LINE CR1 1365 1517 -60 6961 163 12 12 chr20 55895031 55896308 -10771697 + ERVL-B1 LTR ERVL 4481 5757 -7 1235 176 30 30 chr20 55896308 55896575 -10771430 + MLT2B1 LTR ERVL 1 267 -253 233 96 87 10 chr20 55896575 55896679 -10771326 + (TA)n Simple_repeat Simple_repeat 1 112 0 255 114 0 0 chr20 55896679 55896714 -10771291 + MLT2B1 LTR ERVL 342 376 -144 831 207 18 0 chr20 55896721 55896890 -10771115 + MLT2B1 LTR ERVL 309 480 -40 206 163 41 0 chr20 55896891 55896989 -10771016 + (TA)n Simple_repeat Simple_repeat 2 103 0 1197 184 30 30 chr20 55897017 55897284 -10770721 - MLT2B1 LTR ERVL -253 267 1 273 175 16 0 chr20 55897284 55897347 -10770658 - ERVL-B1 LTR ERVL -7 5757 5694 398 93 47 0 chr20 55897349 55897435 -10770570 + (TA)n Simple_repeat Simple_repeat 1 90 0 329 222 44 0 chr20 55897435 55897525 -10770480 + L1MC4 LINE L1 6612 6705 -1337 703 112 47 0 chr20 55897525 55897695 -10770310 + (TA)n Simple_repeat Simple_repeat 2 179 0 221 207 11 0 chr20 55897711 55897798 -10770207 + (TA)n Simple_repeat Simple_repeat 2 89 0 306 158 0 0 chr20 55897829 55897886 -10770119 + MLT2B1 LTR ERVL 464 520 0 505 287 86 6 chr20 55898099 55898273 -10769732 + MIR SINE MIR 63 250 -12 2173 107 0 3 chr20 55898445 55898745 -10769260 - AluSg SINE Alu -11 299 1 840 210 11 17 chr20 55901765 55901941 -10766064 + FAM SINE Alu 1 175 0 282 241 13 25 chr20 55902247 55902326 -10765679 + GA-rich Low_complexity Low_complexity 1 78 0 24 0 0 0 chr20 55902326 55902350 -10765655 + AT_rich Low_complexity Low_complexity 1 24 0 217 344 114 0 chr20 55903114 55903245 -10764760 + L2 LINE L2 2726 2871 -443 240 363 77 0 chr20 55903317 55903408 -10764597 + MER5A DNA MER1_type 58 155 -34 207 328 104 24 chr20 55903321 55903446 -10764559 - MER5A DNA MER1_type -50 139 5 * 525 265 72 51 chr20 55903561 55903893 -10764112 - LTR16C LTR ERVL 0 491 153 696 83 0 0 chr20 55904161 55904257 -10763748 + L1MA2 LINE L1 6201 6296 -8 926 253 126 44 chr20 55904330 55904436 -10763569 - MLT1E LTR MaLR -77 516 420 1672 187 50 25 chr20 55904436 55904799 -10763206 + MLT1A2 LTR MaLR 3 374 0 926 253 126 44 chr20 55904799 55905151 -10762854 - MLT1E LTR MaLR -173 420 20 313 313 139 0 chr20 55905302 55905417 -10762588 + MIR SINE MIR 1 131 -131 376 176 14 14 chr20 55906121 55906194 -10761811 + Tigger5 DNA MER2_type 6 78 -2245 260 266 0 0 chr20 55906194 55906258 -10761747 - Tigger5 DNA MER2_type -3 2320 2257 233 264 42 0 chr20 55906265 55906337 -10761668 + Tigger5 DNA MER2_type 2247 2321 -2 197 256 23 0 chr20 55906391 55906434 -10761571 + L2 LINE L2 3251 3294 -19 262 318 55 0 chr20 55906670 55906780 -10761225 - L2 LINE L2 -2 3270 3155 916 286 13 0 chr20 55906989 55907216 -10760789 + MIR SINE MIR 6 235 -27 252 330 11 0 chr20 55907218 55907312 -10760693 + (TTG)n Simple_repeat Simple_repeat 2 96 0 2131 123 0 0 chr20 55907444 55907737 -10760268 + AluSg SINE Alu 1 293 -17 267 316 252 0 chr20 55907749 55907888 -10760117 - MER5A DNA MER1_type -9 180 7 550 214 54 102 chr20 55907917 55908175 -10759830 - MIR SINE MIR -6 256 4 198 283 0 0 chr20 55908954 55909000 -10759005 - L2 LINE L2 -555 2759 2714 270 0 0 0 chr20 55909084 55909114 -10758891 + (TG)n Simple_repeat Simple_repeat 2 31 0 245 311 114 6 chr20 55910167 55910334 -10757671 - L2 LINE L2 -660 2654 2470 1122 150 183 113 chr20 55910726 55911126 -10756879 + MSTA LTR MaLR 1 428 0 23 0 0 0 chr20 55911563 55911586 -10756419 + AT_rich Low_complexity Low_complexity 1 23 0 2150 92 3 33 chr20 55913336 55913639 -10754366 - AluSg SINE Alu -16 294 1 200 246 35 53 chr20 55914123 55914180 -10753825 + MER5A DNA MER1_type 4 59 -130 369 248 229 0 chr20 55914216 55914321 -10753684 + MER5A DNA MER1_type 61 189 0 258 317 20 0 chr20 55916261 55916362 -10751643 + (CATATA)n Simple_repeat Simple_repeat 5 107 0 239 250 27 7 chr20 55916396 55916544 -10751461 + (TATG)n Simple_repeat Simple_repeat 2 152 0 250 265 10 41 chr20 55916555 55916653 -10751352 + (TATATG)n Simple_repeat Simple_repeat 6 100 0 211 341 11 104 chr20 55918474 55918761 -10749244 - L2 LINE L2 -8 3264 3005 42 20 0 0 chr20 55918867 55918916 -10749089 + AT_rich Low_complexity Low_complexity 1 49 0 2960 73 2 17 chr20 55918987 55919398 -10748607 - L1PA10 LINE L1 -15 6153 5749 359 267 79 36 chr20 55919409 55919565 -10748440 - MIR SINE MIR -46 162 1 294 350 44 33 chr20 55919618 55919798 -10748207 + MIR SINE MIR 25 206 -56 2104 118 7 3 chr20 55920000 55920297 -10747708 + AluSx SINE Alu 1 298 -14 528 77 0 0 chr20 55920297 55920375 -10747630 + (TAG)n Simple_repeat Simple_repeat 1 78 0 207 0 0 0 chr20 55921267 55921290 -10746715 + (A)n Simple_repeat Simple_repeat 1 23 0 250 372 85 24 chr20 55922143 55922307 -10745698 - MIR3 SINE MIR -4 204 31 2567 114 17 0 chr20 55922509 55922867 -10745138 + THE1B LTR MaLR 1 364 0 262 181 0 84 chr20 55923208 55923291 -10744714 - MLT1K LTR MaLR 0 588 513 210 351 0 0 chr20 55923364 55923438 -10744567 + CT-rich Low_complexity Low_complexity 1 74 0 1628 182 90 28 chr20 55923613 55924134 -10743871 - MLT2A2 LTR ERVL 0 554 1 369 317 69 0 chr20 55924273 55924418 -10743587 - MIR SINE MIR -2 260 106 25 0 0 0 chr20 55924972 55924997 -10743008 + AT_rich Low_complexity Low_complexity 1 25 0 348 94 0 0 chr20 55925816 55925869 -10742136 + (TG)n Simple_repeat Simple_repeat 2 54 0 217 304 14 0 chr20 55926585 55926654 -10741351 - MIR SINE MIR -22 240 171 715 294 27 57 chr20 55926687 55926930 -10741075 + LTR16C LTR ERVL 67 293 -198 1626 129 167 3 chr20 55926930 55927295 -10740710 + MSTB LTR MaLR 1 425 -1 715 294 27 57 chr20 55927295 55927489 -10740516 + LTR16C LTR ERVL 293 491 0 304 316 70 19 chr20 55928151 55928322 -10739683 - MIR SINE MIR -2 260 74 2122 234 84 53 chr20 55929151 55929926 -10738079 - MER21B LTR ERV1 -11 852 54 244 195 0 0 chr20 55929959 55930000 -10738005 - MER21B LTR ERV1 -800 63 23 327 308 211 0 chr20 55930761 55930865 -10737140 + L2 LINE L2 3143 3268 -4 284 311 113 7 chr20 55931668 55931819 -10736186 - MER96 DNA MER1_type? -1 174 8 666 279 182 42 chr20 55931841 55932627 -10735378 - L2 LINE L2 -8 3305 2403 1487 163 43 40 chr20 55932652 55932952 -10735053 + AluJo SINE Alu 1 301 -11 518 351 68 10 chr20 55932958 55933266 -10734739 - L2 LINE L2 -22 3291 2966 520 325 66 35 chr20 55934167 55934395 -10733610 + MIR SINE MIR 28 262 0 928 268 99 34 chr20 55934419 55934863 -10733142 + MER74A LTR ERVL 1 473 -85 304 245 51 10 chr20 55934794 55934892 -10733113 - MER88 LTR ERVL -284 180 79 * 1315 187 110 19 chr20 55934966 55935340 -10732665 + LTR37A LTR ERV1 4 411 -15 1631 191 165 32 chr20 55935599 55936091 -10731914 - MER89 LTR ERV1 0 559 3 242 254 172 30 chr20 55936365 55936534 -10731471 - MLT1K LTR MaLR -2 586 394 299 98 39 0 chr20 55936703 55936754 -10731251 + GA-rich Low_complexity Low_complexity 1 53 0 26 0 0 0 chr20 55936897 55936923 -10731082 + AT_rich Low_complexity Low_complexity 1 26 0 285 29 0 0 chr20 55938275 55938309 -10729696 + (CA)n Simple_repeat Simple_repeat 2 35 0 402 324 6 17 chr20 55938318 55938497 -10729508 + GA-rich Low_complexity Low_complexity 2 178 0 210 296 25 69 chr20 55939807 55939966 -10728039 + L2 LINE L2 3156 3307 -6 2437 74 0 0 chr20 55941346 55941644 -10726361 + AluY SINE Alu 1 298 -13 1169 226 49 55 chr20 55942019 55942386 -10725619 - MLT1A1 LTR MaLR 0 365 1 852 181 23 59 chr20 55942696 55942917 -10725088 - MER20 DNA MER1_type -6 213 1 1955 138 7 14 chr20 55943501 55943791 -10724214 + AluSx SINE Alu 1 288 -24 1607 198 24 47 chr20 55943909 55944346 -10723659 + MER63 DNA MER1_type 6 1060 0 2042 181 77 46 chr20 55945635 55946205 -10721800 - L1MD3 LINE L1 -1 7994 7407 266 222 0 0 chr20 55946209 55946263 -10721742 - MLT1F1 LTR MaLR -442 125 72 716 292 40 12 chr20 55946684 55946927 -10721078 - MIR SINE MIR 0 262 1 1574 164 66 112 chr20 55947589 55947683 -10720322 - L1MC/D LINE L1 -550 5794 5697 5904 108 18 7 chr20 55947683 55948662 -10719343 + L1PA14 LINE L1 5171 6159 -2 1574 164 66 112 chr20 55948662 55949260 -10718745 - L1MC/D LINE L1 -647 5697 5133 569 255 41 5 chr20 55949359 55949555 -10718450 - L1MC/D LINE L1 -1068 5078 4876 22 0 0 0 chr20 55949618 55949640 -10718365 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr20 55949661 55949683 -10718322 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr20 55949730 55949752 -10718253 + AT_rich Low_complexity Low_complexity 1 22 0 302 317 15 10 chr20 55950357 55950477 -10717528 + GA-rich Low_complexity Low_complexity 1 120 0 580 289 55 34 chr20 55950672 55950907 -10717098 + MIR SINE MIR 2 241 -21 2274 172 6 40 chr20 55951073 55951591 -10716414 + L1MB4 LINE L1 5681 6180 0 2550 48 0 3 chr20 55951813 55952124 -10715881 + AluY SINE Alu 1 310 -1 7641 22 0 0 chr20 55953103 55954210 -10713795 - L1PA3 LINE L1 -3 6152 5048 513 329 7 66 chr20 55955012 55955286 -10712719 + MIR SINE MIR 2 259 -3 2122 108 34 7 chr20 55955561 55955857 -10712148 + AluSx SINE Alu 1 304 -8 276 338 13 0 chr20 55955947 55956024 -10711981 + MIR SINE MIR 70 147 -61 2396 87 0 3 chr20 55956352 55956664 -10711341 - AluY SINE Alu 0 311 1 22 0 0 0 chr20 55957481 55957503 -10710502 + AT_rich Low_complexity Low_complexity 1 22 0 410 295 31 0 chr20 55958311 55958440 -10709565 - MIR SINE MIR -49 213 81 692 232 21 57 chr20 55958724 55958918 -10709087 + MER58A DNA MER1_type 1 187 -37 26294 65 6 2 chr20 55959636 55964036 -10703969 - L1PA5 LINE L1 -3 6151 1740 199 313 175 0 chr20 55964136 55964216 -10703789 + MIR SINE MIR 6 99 -163 325 289 83 0 chr20 55964529 55964709 -10703296 - MER96B DNA MER1_type? -31 386 192 204 335 120 25 chr20 55964821 55964979 -10703026 - L2 LINE L2 -436 2878 2706 481 283 154 48 chr20 55966323 55966495 -10701510 - L2 LINE L2 0 3313 3161 201 39 0 0 chr20 55966495 55966521 -10701484 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 481 283 154 48 chr20 55966521 55966705 -10701300 - L2 LINE L2 -152 3161 2919 2548 43 3 3 chr20 55967295 55967600 -10700405 + AluY SINE Alu 1 305 -6 236 244 110 0 chr20 55967759 55967841 -10700164 - MLT1J LTR MaLR 0 511 421 302 336 23 31 chr20 55968027 55968283 -10699722 - MLT1J LTR MaLR -257 254 1 181 286 36 18 chr20 55968594 55968650 -10699355 + MIR SINE MIR 51 107 -155 189 288 17 0 chr20 55968717 55968776 -10699229 + MIR SINE MIR 147 206 -56 243 328 95 26 chr20 55969135 55969251 -10698754 - L2 LINE L2 -12 3260 3137 965 257 0 5 chr20 55969960 55970182 -10697823 + MER58A DNA MER1_type 4 224 0 294 278 40 142 chr20 55970227 55970444 -10697561 + L2 LINE L2 2946 3115 -198 2490 57 0 0 chr20 55970444 55970745 -10697260 - AluY SINE Alu -10 301 1 294 278 40 142 chr20 55970745 55970880 -10697125 + L2 LINE L2 3115 3262 -51 1530 163 24 31 chr20 55971060 55971354 -10696651 - AluJo SINE Alu -15 297 6 1538 197 7 4 chr20 55971596 55971865 -10696140 + AluJb SINE Alu 1 270 -42 2209 117 3 0 chr20 55971894 55972201 -10695804 + AluSp SINE Alu 1 308 -5 243 231 66 88 chr20 55972221 55972312 -10695693 + MIR SINE MIR 28 116 -92 239 208 56 42 chr20 55972784 55972856 -10695149 - L2 LINE L2 -8 3305 3233 190 298 53 0 chr20 55973075 55973132 -10694873 - MIR SINE MIR 0 262 203 195 314 57 0 chr20 55973163 55973233 -10694772 - MIR SINE MIR -158 104 31 584 131 20 0 chr20 55973266 55973365 -10694640 + L1PB2 LINE L1 6045 6145 -6 2419 145 36 7 chr20 55973413 55973854 -10694151 + L1PB1 LINE L1 5695 6148 -3 414 39 0 0 chr20 55974075 55974127 -10693878 + (CA)n Simple_repeat Simple_repeat 1 52 0 223 316 32 32 chr20 55974146 55974241 -10693764 - MER5B DNA MER1_type -62 116 22 21791 162 13 12 chr20 55974904 55978213 -10689792 + L1MA3 LINE L1 22 3345 -4220 17910 49 38 2 chr20 55978213 55981337 -10686668 + L1PA5 LINE L1 2975 6147 -7 21791 162 13 12 chr20 55981337 55982886 -10685119 + L1MA3 LINE L1 3345 4890 -2675 6751 47 1 6 chr20 55982889 55983786 -10684219 - L1P LINE L1 -4041 2105 1213 6693 37 4 0 chr20 55983786 55984600 -10683405 + L1PA4 LINE L1 5339 6155 0 2593 182 18 0 chr20 55984601 55985144 -10682861 + L1MA3 LINE L1 4888 5440 -2125 * 6067 140 18 21 chr20 55985141 55986846 -10681159 + L1MA3 LINE L1 6014 7714 -10 1744 186 0 7 chr20 55987035 55987341 -10680664 - AluJb SINE Alu -8 304 1 462 88 0 0 chr20 55987345 55987413 -10680592 + (TTTA)n Simple_repeat Simple_repeat 1 68 0 1682 168 3 25 chr20 55987413 55987699 -10680306 - AluJb SINE Alu -32 280 1 4934 167 31 14 chr20 55987705 55988916 -10679089 - L1MA8 LINE L1 -1 6290 5071 1100 266 93 8 chr20 55988931 55989424 -10678581 - L1ME3 LINE L1 -219 5943 5409 457 324 104 23 chr20 55989428 55989946 -10678059 - L1MC/D LINE L1 -1984 5824 5265 241 337 65 0 chr20 55990716 55990808 -10677197 - MIR SINE MIR -11 251 154 204 200 0 0 chr20 55990878 55990923 -10677082 + GA-rich Low_complexity Low_complexity 3 47 0 281 172 91 61 chr20 55990928 55991027 -10676978 + L1ME4a LINE L1 5964 6065 -56 2347 64 0 3 chr20 55991414 55991710 -10676295 - AluY SINE Alu -16 295 1 375 306 124 38 chr20 55992924 55993110 -10674895 - MIR SINE MIR -53 209 8 360 298 49 63 chr20 55993400 55993605 -10674400 + MIR SINE MIR 6 207 -55 257 135 19 0 chr20 55993897 55993949 -10674056 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 238 339 9 43 chr20 55994092 55994207 -10673798 - L2 LINE L2 -2 3311 3201 2020 198 47 5 chr20 55994447 55994856 -10673149 - MSTB LTR MaLR 0 426 1 200 228 18 18 chr20 55995466 55995523 -10672482 + MIR SINE MIR 3 59 -203 2109 206 104 27 chr20 55995523 55996155 -10671850 - LTR8 LTR ERV1 0 691 11 1186 241 55 104 chr20 55996299 55996674 -10671331 - MLT1E LTR MaLR -6 587 252 2441 57 0 16 chr20 55996674 55996990 -10671015 + AluY SINE Alu 1 311 0 1186 241 55 104 chr20 55996990 55997231 -10670774 - MLT1E LTR MaLR -341 252 1 447 158 42 0 chr20 55997355 55997450 -10670555 - LTR52 LTR ERVL -2 419 321 1666 182 80 0 chr20 55997454 55997855 -10670150 + L1MA9 LINE L1 5873 6305 -7 1113 232 28 9 chr20 55997859 55998182 -10669823 - LTR52 LTR ERVL -91 330 2 387 306 0 66 chr20 55998210 55998393 -10669612 - MLT1J LTR MaLR -109 402 232 2555 223 85 48 chr20 55998700 55999652 -10668353 - L1MC3 LINE L1 -97 7688 6702 263 358 68 20 chr20 55999812 55999960 -10668045 - MIR3 SINE MIR -19 189 35 349 302 62 22 chr20 56000055 56000234 -10667771 - L2 LINE L2 -10 3303 3118 426 308 8 80 chr20 56000429 56000679 -10667326 - L2 LINE L2 -414 2900 2669 407 210 21 65 chr20 56000689 56000875 -10667130 - MER104 DNA Tc2 -2 178 1 1015 298 98 57 chr20 56000883 56001618 -10666387 - L2 LINE L2 -657 2657 1893 4144 181 104 102 chr20 56002270 56002858 -10665147 - L1MC3 LINE L1 -9 7776 7191 289 291 0 12 chr20 56002858 56002944 -10665061 - MLT1J LTR MaLR -442 125 41 4144 181 104 102 chr20 56002944 56003206 -10664799 - L1MC3 LINE L1 -594 7191 6931 351 0 0 0 chr20 56003206 56003245 -10664760 + (TG)n Simple_repeat Simple_repeat 2 40 0 4144 181 104 102 chr20 56003245 56003702 -10664303 - L1MC3 LINE L1 -854 6931 6380 2281 117 0 0 chr20 56003774 56004082 -10663923 + AluY SINE Alu 1 308 -3 24 77 0 0 chr20 56004176 56004228 -10663777 + AT_rich Low_complexity Low_complexity 1 52 0 1273 217 58 4 chr20 56004412 56004688 -10663317 - AluJo SINE Alu -4 308 18 246 236 0 45 chr20 56004696 56004785 -10663220 - HAL1 LINE L1 -120 2387 2303 230 306 24 12 chr20 56004854 56004939 -10663066 - HAL1 LINE L1 -2132 375 290 518 269 42 47 chr20 56004961 56005173 -10662832 - HAL1 LINE L1 -2295 212 2 22 0 0 0 chr20 56005519 56005541 -10662464 + AT_rich Low_complexity Low_complexity 1 22 0 27 62 0 0 chr20 56005905 56005953 -10662052 + AT_rich Low_complexity Low_complexity 1 48 0 31 0 0 0 chr20 56006514 56006545 -10661460 + AT_rich Low_complexity Low_complexity 1 31 0 1250 100 11 0 chr20 56006859 56007039 -10660966 - L1MA1 LINE L1 -262 6040 5859 24 32 0 0 chr20 56007363 56007394 -10660611 + AT_rich Low_complexity Low_complexity 1 31 0 1985 78 47 0 chr20 56007483 56007778 -10660227 - AluY SINE Alu 0 323 17 787 209 84 123 chr20 56008384 56008661 -10659344 + MLT2D LTR ERVL 5 266 -148 1394 221 50 28 chr20 56008661 56009023 -10658982 + MLT1A2 LTR MaLR 1 370 -4 787 209 84 123 chr20 56009023 56009104 -10658901 + MLT2D LTR ERVL 266 349 -65 4275 107 31 3 chr20 56009107 56009778 -10658227 - L1MA3 LINE L1 0 6305 5616 297 210 14 145 chr20 56009778 56009916 -10658089 + MLT2D LTR ERVL 14 133 -281 2147 140 10 3 chr20 56009917 56010354 -10657651 - L1MA3 LINE L1 -697 5605 5167 327 128 0 0 chr20 56010402 56010449 -10657556 + MLT2D LTR ERVL 351 397 0 250 227 0 34 chr20 56011179 56011267 -10656738 + GA-rich Low_complexity Low_complexity 1 85 0 7502 25 5 0 chr20 56011288 56012465 -10655540 + L1PA3 LINE L1 4998 6175 0 454 292 12 25 chr20 56014835 56014996 -10653009 - L2 LINE L2 0 3313 3155 340 300 64 7 chr20 56015101 56015241 -10652764 - MIR SINE MIR -13 249 102 185 108 27 0 chr20 56015465 56015502 -10652503 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 184 167 0 0 chr20 56015570 56015606 -10652399 + L2 LINE L2 3278 3313 0 2298 86 0 0 chr20 56015615 56015918 -10652087 + AluSg SINE Alu 1 303 0 1026 225 9 5 chr20 56016197 56016415 -10651590 - MER20 DNA MER1_type 0 219 1 216 339 9 45 chr20 56017072 56017184 -10650821 + MIR SINE MIR 84 191 -71 2175 112 3 13 chr20 56017316 56017629 -10650376 + AluSg SINE Alu 1 310 0 650 304 21 80 chr20 56017732 56017898 -10650107 - LTR16C LTR ERVL -206 285 142 778 193 16 31 chr20 56017898 56018090 -10649915 + MER53 DNA DNA 1 189 0 650 304 21 80 chr20 56018090 56018209 -10649796 - LTR16C LTR ERVL -349 142 17 300 357 36 7 chr20 56018288 56018428 -10649577 + MLT1K LTR MaLR 189 332 -256 2136 96 58 0 chr20 56019804 56020095 -10647910 + AluSc SINE Alu 1 308 -1 28 29 0 0 chr20 56021043 56021078 -10646927 + AT_rich Low_complexity Low_complexity 1 35 0 2160 245 50 33 chr20 56021133 56022063 -10645942 + L1ME1 LINE L1 5023 5974 -192 3910 246 94 14 chr20 56022067 56023755 -10644250 - L1M4 LINE L1 -2200 4182 2350 26 50 0 0 chr20 56023765 56023805 -10644200 + AT_rich Low_complexity Low_complexity 1 40 0 180 77 0 0 chr20 56023967 56023993 -10644012 + (TTA)n Simple_repeat Simple_repeat 1 26 0 361 246 4 26 chr20 56024174 56024290 -10643715 - MLT1K LTR MaLR -348 240 147 1437 219 49 71 chr20 56024387 56024840 -10643165 - MLT1E2 LTR MaLR -104 522 80 29 28 0 0 chr20 56024894 56024930 -10643075 + AT_rich Low_complexity Low_complexity 1 36 0 1500 196 39 7 chr20 56024968 56025254 -10642751 + AluJo SINE Alu 1 295 -17 811 235 101 58 chr20 56025338 56025683 -10642322 - L2 LINE L2 0 3313 2954 378 0 0 0 chr20 56026592 56026634 -10641371 + (CA)n Simple_repeat Simple_repeat 2 43 0 341 317 44 29 chr20 56026634 56026839 -10641166 - MLT1J LTR MaLR -56 455 248 189 226 0 0 chr20 56027456 56027509 -10640496 + CT-rich Low_complexity Low_complexity 1 53 0 22 0 0 0 chr20 56028327 56028349 -10639656 + AT_rich Low_complexity Low_complexity 1 22 0 664 212 26 124 chr20 56029251 56029477 -10638528 - MIR SINE MIR -29 233 30 30 0 0 0 chr20 56030192 56030222 -10637783 + AT_rich Low_complexity Low_complexity 1 30 0 1162 198 5 0 chr20 56030222 56030439 -10637566 - L1PB3 LINE L1 -6 6148 5931 2074 191 26 4 chr20 56030454 56030909 -10637096 + L1MB1 LINE L1 5703 6167 -1 237 300 27 82 chr20 56031724 56031834 -10636171 + MLT1K LTR MaLR 21 124 -464 208 238 12 12 chr20 56031931 56032011 -10635994 + (TATG)n Simple_repeat Simple_repeat 4 83 0 1699 184 56 40 chr20 56032013 56032386 -10635619 - MLT2D LTR ERVL -40 480 1 967 236 71 9 chr20 56032433 56032658 -10635347 + MER8 DNA MER2_type 1 239 0 192 200 0 0 chr20 56032658 56032698 -10635307 + (TA)n Simple_repeat Simple_repeat 1 40 0 201 195 0 0 chr20 56032737 56032778 -10635227 + (TATG)n Simple_repeat Simple_repeat 2 42 0 213 175 0 0 chr20 56032820 56032860 -10635145 + (TA)n Simple_repeat Simple_repeat 1 40 0 5047 153 80 71 chr20 56032860 56032895 -10635110 - Tigger3b DNA MER2_type -1797 1231 1198 2276 102 3 0 chr20 56032895 56033188 -10634817 - AluSx SINE Alu -18 294 1 5047 153 80 71 chr20 56033188 56033231 -10634774 - Tigger3b DNA MER2_type -1830 1198 1157 2257 93 3 3 chr20 56033231 56033533 -10634472 - AluY SINE Alu -9 302 1 396 182 74 66 chr20 56033539 56033660 -10634345 - FLAM_A SINE Alu -11 122 1 5047 153 80 71 chr20 56033660 56034038 -10633967 - Tigger3b DNA MER2_type -1875 1153 780 2067 110 7 3 chr20 56034038 56034329 -10633676 - AluSg1 SINE Alu -17 292 1 5047 153 80 71 chr20 56034329 56035082 -10632923 - Tigger3b DNA MER2_type -2248 780 2 5958 141 22 20 chr20 56035088 56035231 -10632774 - Tigger1 DNA MER2_type -3 2415 2274 2024 192 43 22 chr20 56035231 56035648 -10632357 - MSTB LTR MaLR 0 426 1 5958 141 22 20 chr20 56035648 56035754 -10632251 - Tigger1 DNA MER2_type -144 2274 2170 1965 121 53 3 chr20 56035754 56036036 -10631969 - AluSx SINE Alu -16 296 1 5958 141 22 20 chr20 56036036 56037106 -10630899 - Tigger1 DNA MER2_type -248 2170 1001 1219 193 0 0 chr20 56037104 56037327 -10630678 - Tigger1 DNA MER2_type -2193 225 3 * 265 317 52 9 chr20 56037564 56037760 -10630245 - L1ME3 LINE L1 -254 5908 5703 644 225 63 89 chr20 56037802 56037875 -10630130 + MER5A DNA MER1_type 1 74 -115 1657 215 20 6 chr20 56037875 56038233 -10629772 + MLT1A1 LTR MaLR 3 365 0 644 225 63 89 chr20 56038233 56038350 -10629655 + MER5A DNA MER1_type 74 186 -3 22 0 0 0 chr20 56039218 56039240 -10628765 + AT_rich Low_complexity Low_complexity 1 22 0 570 253 88 84 chr20 56039388 56039649 -10628356 + MIR SINE MIR 1 262 0 45 45 0 0 chr20 56039752 56039818 -10628187 + AT_rich Low_complexity Low_complexity 1 66 0 201 147 0 0 chr20 56039957 56039991 -10628014 + (CA)n Simple_repeat Simple_repeat 1 34 0 410 285 65 27 chr20 56040624 56040810 -10627195 + MER117 DNA MER1_type 3 195 -2 254 305 98 0 chr20 56041002 56041084 -10626921 + L2 LINE L2 3211 3300 -13 401 306 110 42 chr20 56041086 56041673 -10626332 - L2 LINE L2 -2 3311 2686 1909 196 14 6 chr20 56043061 56043423 -10624582 - MLT1A1 LTR MaLR 0 365 1 1506 293 168 18 chr20 56043507 56044244 -10623761 + L2 LINE L2 670 1517 -1797 285 318 31 36 chr20 56044600 56044792 -10623213 + L2 LINE L2 1518 1708 -1606 1363 298 135 15 chr20 56044950 56045678 -10622327 + L2 LINE L2 1710 2524 -790 355 279 83 35 chr20 56045722 56045951 -10622054 - MER97c DNA MER1_type? -37 1053 814 1930 274 30 10 chr20 56046019 56046611 -10621394 - MER97a DNA MER1_type? -289 605 2 304 230 0 0 chr20 56046759 56046833 -10621172 + Charlie8 DNA MER1_type 72 145 -2272 925 229 137 19 chr20 56046833 56047147 -10620858 + L1MB8 LINE L1 5828 6178 0 348 334 44 57 chr20 56047163 56047480 -10620525 + Charlie8 DNA MER1_type 142 454 -1963 378 42 0 0 chr20 56047907 56047955 -10620050 + (TC)n Simple_repeat Simple_repeat 1 48 0 270 0 0 0 chr20 56047954 56047984 -10620021 + (CA)n Simple_repeat Simple_repeat 1 30 0 * 2160 117 3 3 chr20 56048018 56048318 -10619687 + AluSq SINE Alu 1 300 -13 1960 171 40 36 chr20 56048343 56048883 -10619122 - MLT2A2 LTR ERVL -8 546 1 2114 107 31 3 chr20 56048978 56049267 -10618738 + AluSx SINE Alu 3 299 -13 212 315 90 0 chr20 56049273 56049362 -10618643 + MIR SINE MIR 57 153 -109 23 0 0 0 chr20 56050198 56050221 -10617784 + AT_rich Low_complexity Low_complexity 1 23 0 321 225 123 51 chr20 56050623 56050761 -10617244 + L1MC/D LINE L1 5613 5760 -2048 250 194 42 42 chr20 56050916 56050988 -10617017 + (TATATG)n Simple_repeat Simple_repeat 1 72 0 1718 234 35 65 chr20 56051100 56051612 -10616393 - MLT2B3 LTR ERVL 0 554 58 3390 161 49 65 chr20 56051637 56052076 -10615929 - LTR39 LTR ERV1 -53 730 306 3856 49 0 0 chr20 56052076 56052546 -10615459 - L1PA5 LINE L1 -13 6141 5672 3390 161 49 65 chr20 56052546 56052847 -10615158 - LTR39 LTR ERV1 -477 306 2 390 108 36 48 chr20 56052856 56052939 -10615066 + L1ME4a LINE L1 6040 6121 0 743 266 0 5 chr20 56053521 56053709 -10614296 - AluJo SINE Alu -6 306 120 2092 58 43 22 chr20 56053967 56054269 -10613736 - AluY SINE Alu 0 308 1 289 365 9 9 chr20 56054289 56054404 -10613601 + L2 LINE L2 3193 3307 -6 3625 228 90 29 chr20 56054619 56055239 -10612766 - L1MC4 LINE L1 -141 7901 7320 1726 192 0 10 chr20 56055239 56055541 -10612464 + AluJo SINE Alu 1 299 -13 3625 228 90 29 chr20 56055541 56056065 -10611940 - L1MC4 LINE L1 -722 7320 6687 297 282 0 0 chr20 56056078 56056156 -10611849 - L1MC4 LINE L1 -1492 6550 6473 292 330 18 9 chr20 56056245 56056357 -10611648 - L2 LINE L2 -9 3304 3192 243 0 0 0 chr20 56056393 56056420 -10611585 + (T)n Simple_repeat Simple_repeat 1 27 0 462 324 73 66 chr20 56056924 56057474 -10610531 - L2 LINE L2 0 3313 2739 234 238 95 0 chr20 56058498 56058561 -10609444 + MER102a DNA MER1_type 41 109 -221 1657 182 0 24 chr20 56058589 56058885 -10609120 + AluJb SINE Alu 1 289 -23 327 252 8 92 chr20 56058912 56059031 -10608974 + MER102a DNA MER1_type 213 321 -9 730 207 58 0 chr20 56059961 56060149 -10607856 - MER96B DNA MER1_type? -25 392 194 1951 112 29 4 chr20 56060171 56060478 -10607527 - AluSq SINE Alu 0 314 1 3731 41 68 0 chr20 56061120 56061579 -10606426 - LTR2B LTR ERV1 0 490 1 567 262 296 14 chr20 56061716 56062010 -10605995 + L2 LINE L2 2907 3283 -30 662 226 94 22 chr20 56062013 56062162 -10605843 - LTR16A1 LTR ERVL 0 457 320 393 272 78 0 chr20 56062162 56062265 -10605740 + MER81 DNA DNA 1 111 -3 662 226 94 22 chr20 56062265 56062492 -10605513 - LTR16A1 LTR ERVL -137 320 12 282 244 0 47 chr20 56063062 56063148 -10604857 + (TATATG)n Simple_repeat Simple_repeat 3 84 0 1596 166 3 40 chr20 56064944 56065246 -10602759 + AluJo SINE Alu 13 303 -9 1376 236 35 50 chr20 56065616 56065692 -10602313 + MSTD LTR MaLR 1 77 -319 2765 26 0 0 chr20 56065692 56066000 -10602005 - AluY SINE Alu -3 308 1 1376 236 35 50 chr20 56066000 56066325 -10601680 + MSTD LTR MaLR 77 396 0 688 343 17 4 chr20 56066395 56066634 -10601371 + MIR SINE MIR 11 252 -10 1835 159 3 3 chr20 56067176 56067471 -10600534 + AluSg SINE Alu 1 295 -15 228 333 52 0 chr20 56067896 56067992 -10600013 + L2 LINE L2 1042 1142 -2172 280 261 177 93 chr20 56068106 56068417 -10599588 + MLT1J LTR MaLR 111 447 -64 243 0 0 0 chr20 56068447 56068474 -10599531 + (T)n Simple_repeat Simple_repeat 1 27 0 886 335 143 28 chr20 56068659 56069735 -10598270 + L2 LINE L2 1358 2557 -757 604 262 74 93 chr20 56069786 56069967 -10598038 + L1ME3A LINE L1 5454 5637 -533 1988 134 3 3 chr20 56069967 56070280 -10597725 + AluSx SINE Alu 1 313 0 262 0 0 0 chr20 56070251 56070313 -10597692 + (TAA)n Simple_repeat Simple_repeat 2 63 0 604 262 74 93 chr20 56070280 56070655 -10597350 + L1ME3A LINE L1 5637 5969 -201 3494 187 38 31 chr20 56070762 56071547 -10596458 + Ricksha_b DNA DNA 59 849 -405 2040 151 3 0 chr20 56071547 56071845 -10596160 - AluSx SINE Alu -13 299 1 1599 182 18 13 chr20 56071845 56072224 -10595781 + Ricksha_b DNA DNA 1317 1654 -13 300 291 88 34 chr20 56072232 56072380 -10595625 + L1ME3A LINE L1 5988 6143 -27 258 285 31 0 chr20 56072381 56072511 -10595494 + (TA)n Simple_repeat Simple_repeat 1 134 0 272 339 85 45 chr20 56072538 56073024 -10594981 + L2 LINE L2 2766 3275 -38 308 276 109 40 chr20 56074855 56075029 -10592976 - L1M4 LINE L1 -2299 3847 3662 2378 275 57 39 chr20 56075626 56076747 -10591258 - L1MC4 LINE L1 -68 7974 6834 1309 73 0 0 chr20 56076995 56077160 -10590845 - AluY SINE Alu -5 306 142 1793 123 0 25 chr20 56077427 56077703 -10590302 - AluSx SINE Alu 0 312 44 21 57 0 0 chr20 56078663 56078698 -10589307 + AT_rich Low_complexity Low_complexity 1 35 0 2122 123 0 0 chr20 56079705 56080005 -10588000 + AluSx SINE Alu 3 302 -10 531 281 118 24 chr20 56080725 56080971 -10587034 + MLT1K LTR MaLR 22 290 -298 1371 174 62 44 chr20 56081034 56081309 -10586696 - THE1B LTR MaLR 0 364 85 233 151 19 0 chr20 56082064 56082117 -10585888 + CT-rich Low_complexity Low_complexity 1 54 0 466 315 97 9 chr20 56083715 56083931 -10584074 - MIR SINE MIR -26 236 2 615 229 86 6 chr20 56084420 56084595 -10583410 - MER5A DNA MER1_type 0 189 1 242 307 79 7 chr20 56084814 56084954 -10583051 + LTR16C LTR ERVL 303 452 -39 302 303 50 34 chr20 56085239 56085358 -10582647 + L2 LINE L2 3193 3313 0 389 264 54 39 chr20 56085668 56085791 -10582214 - L2 LINE L2 0 3313 3188 652 144 62 0 chr20 56085791 56085937 -10582068 - L1MA8 LINE L1 -7 6284 6130 295 291 101 77 chr20 56086127 56086505 -10581500 + L2 LINE L2 2924 3310 -3 539 308 66 87 chr20 56087381 56087955 -10580050 + MLT1K LTR MaLR 2 563 -25 959 189 296 0 chr20 56088906 56089139 -10578866 - AluJb SINE Alu 0 302 1 1089 294 47 60 chr20 56089840 56090441 -10577564 - MLT1E LTR MaLR 0 593 1 2273 101 0 13 chr20 56090474 56090782 -10577223 + AluSx SINE Alu 1 304 -8 344 347 32 32 chr20 56090793 56091012 -10576993 + MIR SINE MIR 30 248 -14 435 151 57 0 chr20 56091017 56091176 -10576829 + (TA)n Simple_repeat Simple_repeat 2 169 0 358 343 83 6 chr20 56091254 56091423 -10576582 + MIR SINE MIR 15 196 -66 204 153 82 0 chr20 56091472 56091557 -10576448 + (TA)n Simple_repeat Simple_repeat 1 92 0 226 0 0 56 chr20 56092792 56092828 -10575177 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 204 258 194 16 chr20 56093063 56093187 -10574818 + MIR SINE MIR 111 256 -6 1039 205 11 19 chr20 56093803 56094071 -10573934 - L1MA4 LINE L1 -4 6296 6031 293 290 81 74 chr20 56094300 56094855 -10573150 - L1MEd LINE L1 -4959 1160 602 290 300 22 44 chr20 56095297 56095387 -10572618 - L2 LINE L2 -1 3271 3184 211 278 83 28 chr20 56095639 56095747 -10572258 + MIR SINE MIR 78 191 -71 210 349 0 23 chr20 56096168 56096254 -10571751 + L2 LINE L2 3229 3312 -1 654 13 0 0 chr20 56096325 56096401 -10571604 - L1PA5 LINE L1 -6 6148 6073 252 345 41 58 chr20 56096440 56096611 -10571394 + MIR SINE MIR 46 213 -49 326 207 24 49 chr20 56097646 56097728 -10570277 - MIR SINE MIR -106 156 77 263 321 18 0 chr20 56098390 56098502 -10569503 + (TA)n Simple_repeat Simple_repeat 1 114 0 333 263 127 62 chr20 56098748 56099007 -10568998 - L1MC4a LINE L1 -1847 5961 5686 2066 133 0 3 chr20 56099160 56099472 -10568533 + AluSx SINE Alu 1 312 0 22 56 0 0 chr20 56099604 56099640 -10568365 + AT_rich Low_complexity Low_complexity 1 36 0 239 176 55 11 chr20 56099753 56099844 -10568161 - L1ME4a LINE L1 0 6121 6027 680 12 24 0 chr20 56099929 56100013 -10567992 + (TTCC)n Simple_repeat Simple_repeat 3 88 0 413 209 23 0 chr20 56100072 56100158 -10567847 + MER5B DNA MER1_type 3 90 -88 243 0 0 0 chr20 56100190 56100217 -10567788 + (CA)n Simple_repeat Simple_repeat 2 28 0 3332 72 0 0 chr20 56100291 56100733 -10567272 - L1PA13 LINE L1 0 6163 5722 315 0 0 0 chr20 56102147 56102182 -10565823 + (CA)n Simple_repeat Simple_repeat 2 36 0 369 307 9 0 chr20 56102290 56102404 -10565601 - L1ME4a LINE L1 -2006 5802 5688 409 195 12 12 chr20 56102406 56102488 -10565517 + MIR SINE MIR 88 169 -93 340 332 104 30 chr20 56102566 56102834 -10565171 - L1ME4a LINE L1 -440 5681 5394 313 233 120 47 chr20 56103072 56103222 -10564783 - L1ME4a LINE L1 -1314 4832 4672 568 227 17 0 chr20 56103573 56103692 -10564313 + MER63 DNA MER1_type 3 749 -87 515 270 82 25 chr20 56103875 56104475 -10563530 - L1ME3A LINE L1 -284 5886 5203 1147 201 45 80 chr20 56104654 56105081 -10562924 - MER66A LTR ERV1 -40 438 27 9289 149 9 5 chr20 56105092 56106647 -10561358 - MER66A-int LTR ERV1 0 6676 5115 719 62 82 0 chr20 56106647 56106744 -10561261 - AluSc SINE Alu -186 123 19 8191 270 44 33 chr20 56106744 56107160 -10560845 - MER66A-int LTR ERV1 -1571 6177 5767 2560 126 44 7 chr20 56107160 56107573 -10560432 - MSTA LTR MaLR 0 428 1 8191 270 44 33 chr20 56107573 56112615 -10555390 - MER66A-int LTR ERV1 -1981 5767 1210 568 245 50 13 chr20 56112725 56112884 -10555121 - MER66A-int LTR ERV1 -3574 3102 2938 2820 227 53 19 chr20 56112963 56113878 -10554127 - MER66A-int LTR ERV1 -5562 1114 132 1280 207 35 16 chr20 56113930 56114282 -10553723 - MER66A LTR ERV1 -40 438 93 21 0 0 0 chr20 56114899 56114920 -10553085 + AT_rich Low_complexity Low_complexity 1 21 0 1534 185 14 28 chr20 56114920 56115207 -10552798 - AluJb SINE Alu -26 286 4 2139 142 0 0 chr20 56115475 56115784 -10552221 + AluSx SINE Alu 1 309 -3 23 101 0 0 chr20 56116806 56116885 -10551120 + AT_rich Low_complexity Low_complexity 1 79 0 2875 169 22 7 chr20 56116885 56117401 -10550604 - L1MA9 LINE L1 -7 6305 5779 294 73 0 0 chr20 56117401 56117442 -10550563 + (CA)n Simple_repeat Simple_repeat 1 41 0 2875 169 22 7 chr20 56117442 56117465 -10550540 - L1MA9 LINE L1 -533 5779 5758 1360 150 29 80 chr20 56117465 56117818 -10550187 + L1MA9 LINE L1 5428 5749 -563 1902 218 7 31 chr20 56117826 56117977 -10550028 + MER74C LTR ERVL 13 166 -294 2821 73 3 0 chr20 56117977 56118331 -10549674 + THE1A LTR MaLR 1 355 0 11085 98 31 3 chr20 56118331 56119869 -10548136 + THE1A-int LTR MaLR 1 1580 0 2539 111 6 0 chr20 56119869 56120222 -10547783 + THE1A LTR MaLR 1 355 0 1902 218 7 31 chr20 56120222 56120518 -10547487 + MER74C LTR ERVL 163 451 -9 2214 111 17 0 chr20 56120519 56120817 -10547188 + AluSc SINE Alu 1 303 -6 233 320 60 0 chr20 56120824 56120924 -10547081 - L2 LINE L2 -21 3292 3187 28 0 0 0 chr20 56120998 56121026 -10546979 + AT_rich Low_complexity Low_complexity 1 28 0 319 154 0 0 chr20 56121330 56121382 -10546623 - L1MC4 LINE L1 -1339 6703 6652 21 0 0 0 chr20 56121392 56121413 -10546592 + AT_rich Low_complexity Low_complexity 1 21 0 363 302 157 43 chr20 56121762 56121997 -10546008 - MIR SINE MIR 0 262 1 2565 143 24 2 chr20 56122086 56122505 -10545500 + MSTA LTR MaLR 1 428 0 903 300 15 40 chr20 56122776 56123103 -10544902 - MLT1E LTR MaLR -69 524 206 282 286 9 86 chr20 56123133 56123238 -10544767 - MLT1E LTR MaLR -493 100 4 1594 306 102 61 chr20 56123340 56124634 -10543371 + L2 LINE L2 1979 3313 0 520 259 7 0 chr20 56124647 56124786 -10543219 - L1M4 LINE L1 -2291 3855 3716 1204 261 79 23 chr20 56124786 56125318 -10542687 + L1ME1 LINE L1 5510 6071 -95 1574 256 85 14 chr20 56126711 56127226 -10540779 + L1MDa LINE L1 788 1339 -5201 548 214 6 13 chr20 56127224 56127383 -10540622 + L1M4 LINE L1 3618 3775 -2371 * 214 349 0 0 chr20 56127897 56127963 -10540042 + L2 LINE L2 2991 3056 -257 22 80 0 0 chr20 56128045 56128095 -10539910 + AT_rich Low_complexity Low_complexity 1 50 0 2188 118 6 10 chr20 56128469 56128782 -10539223 + AluSx SINE Alu 1 312 0 660 222 0 69 chr20 56128896 56129099 -10538906 + MER5A DNA MER1_type 1 189 0 342 305 0 19 chr20 56129113 56129218 -10538787 + MIR SINE MIR 45 147 -115 288 0 0 0 chr20 56130668 56130700 -10537305 + (TG)n Simple_repeat Simple_repeat 2 33 0 1811 236 78 27 chr20 56131302 56131888 -10536117 - MLT1E2 LTR MaLR -1 625 10 568 220 75 44 chr20 56131895 56132054 -10535951 - MIR SINE MIR -98 164 1 365 317 158 0 chr20 56133057 56133240 -10534765 + MIR SINE MIR 49 260 -2 326 160 9 28 chr20 56133318 56133424 -10534581 + CT-rich Low_complexity Low_complexity 2 105 0 2058 158 3 0 chr20 56133539 56133850 -10534155 + AluSp SINE Alu 1 312 -1 456 362 42 15 chr20 56135340 56135677 -10532328 - MLT1K LTR MaLR -111 477 132 340 308 29 41 chr20 56135813 56135985 -10532020 - MIR3 SINE MIR -3 205 36 644 258 40 0 chr20 56136502 56136653 -10531352 - MER58A DNA MER1_type -38 186 30 2404 74 0 7 chr20 56136787 56137083 -10530922 - AluSc SINE Alu -15 294 1 11382 183 21 29 chr20 56138669 56139827 -10528178 - L1PA10 LINE L1 -1 7605 6439 2259 100 0 3 chr20 56139827 56140118 -10527887 - AluSq SINE Alu -23 290 1 11382 183 21 29 chr20 56140118 56144093 -10523912 - L1PA10 LINE L1 -1167 6439 1092 189 74 0 0 chr20 56144093 56144120 -10523885 + (TTG)n Simple_repeat Simple_repeat 1 27 0 11382 183 21 29 chr20 56144120 56145203 -10522802 - L1PA10 LINE L1 -6514 1092 1 781 251 5 0 chr20 56145702 56145917 -10522088 - L1M4 LINE L1 -2146 4000 3785 354 45 0 0 chr20 56145946 56145990 -10522015 + (TG)n Simple_repeat Simple_repeat 2 45 0 871 220 125 44 chr20 56147745 56148040 -10519965 + MER58B DNA MER1_type 12 330 -11 333 308 81 50 chr20 56148526 56148747 -10519258 - L1ME4a LINE L1 -44 6077 5850 427 336 67 67 chr20 56148952 56149294 -10518711 + L2 LINE L2 2931 3272 0 243 250 0 0 chr20 56149418 56149478 -10518527 + (TAGA)n Simple_repeat Simple_repeat 4 63 0 4845 176 37 6 chr20 56149850 56151489 -10516516 - L1MA5 LINE L1 0 6300 4617 206 366 120 33 chr20 56151575 56151851 -10516154 - L2 LINE L2 -185 3128 2829 495 0 0 0 chr20 56152641 56152696 -10515309 + (CA)n Simple_repeat Simple_repeat 2 56 0 6018 23 16 0 chr20 56153331 56154035 -10513970 - L1PA3 LINE L1 -5 6150 5436 1916 24 0 0 chr20 56154035 56154363 -10513642 + L1P2 LINE L1 5152 5479 -676 6597 197 27 40 chr20 56154881 56156389 -10511616 - L1MC3 LINE L1 0 7785 6297 272 208 0 14 chr20 56156448 56156520 -10511485 + (TA)n Simple_repeat Simple_repeat 2 72 0 813 236 107 13 chr20 56156919 56157152 -10510853 + MIR SINE MIR 8 262 0 1602 229 19 45 chr20 56157165 56157291 -10510714 + MLT1E2 LTR MaLR 215 343 -283 2038 144 3 0 chr20 56157291 56157583 -10510422 + AluSg SINE Alu 1 293 -17 1602 229 19 45 chr20 56157583 56157879 -10510126 + MLT1E2 LTR MaLR 343 626 0 322 40 0 20 chr20 56157969 56158019 -10509986 - L1PA4 LINE L1 -2 6153 6105 786 186 99 6 chr20 56158763 56158935 -10509070 + MER5A DNA MER1_type 2 189 0 180 77 0 0 chr20 56159701 56159727 -10508278 + (CA)n Simple_repeat Simple_repeat 2 27 0 308 244 16 8 chr20 56159730 56159857 -10508148 + (TA)n Simple_repeat Simple_repeat 1 128 0 397 166 28 33 chr20 56159957 56160138 -10507867 + (TA)n Simple_repeat Simple_repeat 1 180 0 334 250 0 22 chr20 56160168 56160260 -10507745 + L1MC4 LINE L1 6614 6703 -1339 2364 96 0 0 chr20 56160517 56160818 -10507187 + AluSx SINE Alu 1 301 -11 2760 13 0 0 chr20 56161372 56161675 -10506330 - AluYa5 SINE Alu -8 303 1 1778 62 0 0 chr20 56161680 56161890 -10506115 - AluY SINE Alu -19 292 83 248 109 0 22 chr20 56161905 56161951 -10506054 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 473 357 11 11 chr20 56162323 56162508 -10505497 + MIR SINE MIR 48 232 -30 362 167 0 0 chr20 56162524 56162584 -10505421 - MLT1F LTR MaLR 0 567 508 331 264 18 9 chr20 56162584 56162694 -10505311 + (TA)n Simple_repeat Simple_repeat 1 111 0 306 0 0 0 chr20 56162698 56162732 -10505273 + (TG)n Simple_repeat Simple_repeat 1 34 0 491 158 0 53 chr20 56162745 56162840 -10505165 - MLT1F LTR MaLR -188 354 265 327 332 25 60 chr20 56162881 56163080 -10504925 - L2 LINE L2 -470 2844 2653 1729 159 18 11 chr20 56163360 56163643 -10504362 + AluJo SINE Alu 4 288 -24 245 29 29 0 chr20 56163648 56163682 -10504323 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 191 288 76 0 chr20 56164502 56164568 -10503437 - L2 LINE L2 -8 3264 3194 307 340 12 31 chr20 56164899 56165061 -10502944 - MIR SINE MIR -14 248 90 1939 163 16 36 chr20 56165380 56165767 -10502238 - L1MA6 LINE L1 -10 6290 5912 430 235 134 40 chr20 56166857 56166898 -10501107 + MIR SINE MIR 82 118 -144 1699 145 52 80 chr20 56166898 56167284 -10500721 - THE1C LTR MaLR 0 375 1 430 235 134 40 chr20 56167284 56167391 -10500614 + MIR SINE MIR 118 244 -18 281 358 8 16 chr20 56168407 56168530 -10499475 - MIR3 SINE MIR -2 206 85 719 286 119 92 chr20 56168571 56169091 -10498914 + MLT1K LTR MaLR 50 583 -5 642 273 121 102 chr20 56169425 56169959 -10498046 - MLT1G LTR MaLR 0 595 14 1174 265 44 59 chr20 56169962 56170194 -10497811 - L1MD2 LINE L1 -11 6348 6114 324 0 0 0 chr20 56170194 56170230 -10497775 + (TG)n Simple_repeat Simple_repeat 2 37 0 1865 130 32 7 chr20 56170240 56170517 -10497488 - AluSx SINE Alu -15 297 14 1174 265 44 59 chr20 56170517 56170869 -10497136 - L1MD2 LINE L1 -254 6105 5762 837 145 36 133 chr20 56170868 56171163 -10496842 - L1MDa LINE L1 -3890 2650 2390 * 1953 134 3 0 chr20 56171163 56171446 -10496559 + AluSx SINE Alu 6 289 -23 837 145 36 133 chr20 56171446 56171487 -10496518 - L1MDa LINE L1 -4150 2390 2347 2494 141 159 38 chr20 56171848 56172396 -10495609 + LTR18B LTR ERVL 1 614 0 261 98 0 0 chr20 56172762 56172803 -10495202 + (CA)n Simple_repeat Simple_repeat 2 42 0 720 219 40 70 chr20 56172831 56173160 -10494845 - L1MC5 LINE L1 -29 7932 7614 404 296 47 24 chr20 56174477 56174646 -10493359 - MIR SINE MIR -15 247 75 1438 167 71 43 chr20 56174838 56175119 -10492886 - AluJo SINE Alu -23 289 1 251 256 35 12 chr20 56175614 56175700 -10492305 + (CATATA)n Simple_repeat Simple_repeat 3 90 0 288 246 0 107 chr20 56175908 56176086 -10491919 - L1MD2 LINE L1 -394 5770 5612 1297 220 71 48 chr20 56176087 56176483 -10491522 - MLT1F1 LTR MaLR 0 567 163 2172 179 35 22 chr20 56176494 56176985 -10491020 - L1MD1 LINE L1 -8 6628 6132 1722 218 73 34 chr20 56176997 56177464 -10490541 + MLT1D LTR MaLR 18 502 -3 1977 210 23 23 chr20 56177467 56177544 -10490461 - L1MD1 LINE L1 -500 6136 6060 1874 212 55 68 chr20 56177544 56178105 -10489900 - MLT2B3 LTR ERVL 0 554 1 1977 210 23 23 chr20 56178105 56178503 -10489502 - L1MD1 LINE L1 -575 6061 5661 768 208 50 128 chr20 56178486 56179063 -10488942 - L1MD1 LINE L1 -4734 1806 1275 * 4917 119 19 16 chr20 56179077 56179830 -10488175 - MER4E LTR ERV1 -24 755 1 520 224 63 0 chr20 56179845 56179988 -10488017 - L1MD1 LINE L1 -5302 1238 1087 1389 174 13 62 chr20 56180006 56180084 -10487921 + L1 LINE L1 2857 2937 -3209 2358 95 0 0 chr20 56180084 56180378 -10487627 + AluY SINE Alu 3 296 -15 1389 174 13 62 chr20 56180378 56180468 -10487537 + L1 LINE L1 2937 3030 -3116 3500 128 48 0 chr20 56180468 56181008 -10486997 - MER61E LTR ERV1 -3 566 1 1389 174 13 62 chr20 56181008 56181224 -10486781 + L1 LINE L1 3030 3223 -2923 2847 252 49 38 chr20 56181228 56182178 -10485827 - L1MD1 LINE L1 -5489 1051 29 442 285 21 30 chr20 56182178 56182369 -10485636 - MLT1E LTR MaLR -381 186 1 1384 143 0 0 chr20 56182493 56182717 -10485288 + Tigger1 DNA MER2_type 801 1024 -1394 1362 253 101 55 chr20 56182723 56182815 -10485190 - L1M2 LINE L1 -5128 2081 1995 2362 136 8 6 chr20 56182815 56183176 -10484829 + THE1B LTR MaLR 1 362 -2 1362 253 101 55 chr20 56183176 56183460 -10484545 - L1M2 LINE L1 -5214 1995 1725 249 33 0 0 chr20 56183460 56183490 -10484515 + (TGG)n Simple_repeat Simple_repeat 2 31 0 1362 253 101 55 chr20 56183490 56184303 -10483702 - L1M2 LINE L1 -5484 1725 2 * 2944 218 135 109 chr20 56184300 56185455 -10482550 - L1MCa LINE L1 -2899 3527 2403 2113 134 3 0 chr20 56185455 56185762 -10482243 - AluSc SINE Alu -1 308 1 2944 218 135 109 chr20 56185762 56187149 -10480856 - L1MCa LINE L1 -4023 2403 881 2785 16 0 0 chr20 56187149 56187457 -10480548 - AluYa5 SINE Alu -3 308 1 2944 218 135 109 chr20 56187457 56188315 -10479690 - L1MCa LINE L1 -5545 881 46 836 286 97 31 chr20 56188337 56188922 -10479083 - L1M4 LINE L1 -934 5212 4589 517 138 0 0 chr20 56189012 56189099 -10478906 - L1P LINE L1 -1103 5043 4957 4199 98 2 0 chr20 56189099 56189676 -10478329 + L1PA12 LINE L1 5588 6167 -1 341 176 14 0 chr20 56190159 56190233 -10477772 + (TA)n Simple_repeat Simple_repeat 2 76 0 25 0 0 0 chr20 56190322 56190347 -10477658 + AT_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr20 56190816 56190853 -10477152 + AT_rich Low_complexity Low_complexity 1 37 0 366 250 81 23 chr20 56191512 56191684 -10476321 - MER69 DNA AcHobo -4 2522 2341 1431 279 94 18 chr20 56192024 56192526 -10475479 - MER69 DNA AcHobo -1981 545 6 231 374 104 0 chr20 56193413 56193528 -10474477 + L2 LINE L2 3134 3260 -12 231 291 149 15 chr20 56194320 56194454 -10473551 + L2 LINE L2 3160 3311 -2 315 286 0 51 chr20 56194466 56194564 -10473441 + MER20 DNA MER1_type 3 95 -124 1318 107 0 27 chr20 56194782 56194943 -10473062 - AluSg/x SINE Alu -5 307 150 3996 59 0 0 chr20 56194943 56195433 -10472572 - LTR2B LTR ERV1 0 490 1 1318 107 0 27 chr20 56195433 56195458 -10472547 - AluSg/x SINE Alu -162 150 126 709 157 16 0 chr20 56195458 56195579 -10472426 - FLAM_C SINE Alu -8 125 3 233 83 33 33 chr20 56196060 56196120 -10471885 + (TAGA)n Simple_repeat Simple_repeat 2 61 0 203 173 19 0 chr20 56196202 56196254 -10471751 + (CA)n Simple_repeat Simple_repeat 2 54 0 4972 131 61 9 chr20 56196919 56197783 -10470222 - L1MA4 LINE L1 0 6300 5392 371 340 98 35 chr20 56197799 56198167 -10469838 - L1ME LINE L1 -383 5738 5348 21 0 0 0 chr20 56198244 56198265 -10469740 + AT_rich Low_complexity Low_complexity 1 21 0 445 317 0 0 chr20 56198907 56199027 -10468978 + MER5C DNA MER1_type 3 122 -202 282 286 95 0 chr20 56199040 56199124 -10468881 + MER5C DNA MER1_type 230 321 -3 328 266 71 27 chr20 56199592 56199776 -10468229 + L1MD2 LINE L1 4521 4712 -1434 2423 241 64 40 chr20 56199794 56200132 -10467873 + L1MD2 LINE L1 5436 5764 -595 3443 125 14 6 chr20 56200132 56200652 -10467353 - MER1A DNA MER1_type 0 527 4 2423 241 64 40 chr20 56200652 56201214 -10466791 + L1MD2 LINE L1 5764 6358 -1 2530 45 0 0 chr20 56201225 56201517 -10466488 + AluY SINE Alu 2 293 -18 323 294 87 39 chr20 56202655 56203093 -10464912 - L1ME LINE L1 -1310 4836 4378 2011 153 40 113 chr20 56204489 56204993 -10463012 + MLT1C LTR MaLR 1 467 0 1113 248 135 30 chr20 56204995 56205212 -10462793 + L1ME LINE L1 354 547 -5523 2158 119 0 13 chr20 56205212 56205523 -10462482 + AluSx SINE Alu 1 307 -5 1113 248 135 30 chr20 56205523 56205845 -10462160 + L1ME LINE L1 547 950 -5120 876 206 111 4 chr20 56205855 56206110 -10461895 - L1MC/D LINE L1 -743 5403 5238 284 140 40 0 chr20 56206231 56206281 -10461724 - L1MDa LINE L1 -4655 1885 1834 268 179 54 12 chr20 56206382 56206550 -10461455 + (TA)n Simple_repeat Simple_repeat 1 175 0 432 113 66 13 chr20 56206623 56206774 -10461231 + (TA)n Simple_repeat Simple_repeat 1 159 0 243 0 0 0 chr20 56208346 56208373 -10459632 + (TA)n Simple_repeat Simple_repeat 1 27 0 318 301 142 0 chr20 56208405 56208518 -10459487 - MLT1J LTR MaLR -85 530 306 2416 90 7 0 chr20 56208546 56208856 -10459149 - AluSq SINE Alu -1 312 1 819 316 92 9 chr20 56208953 56209301 -10458704 + LTR16A LTR ERVL 68 444 -6 184 351 21 32 chr20 56209722 56209816 -10458189 - MIR SINE MIR -2 260 168 413 323 34 8 chr20 56209921 56210110 -10457895 - MIR SINE MIR -50 212 21 817 277 143 18 chr20 56210566 56210966 -10457039 - MLT1G1 LTR MaLR -66 529 45 1312 239 4 7 chr20 56211199 56211475 -10456530 - MLT1A1 LTR MaLR -12 353 79 492 18 0 0 chr20 56211663 56211720 -10456285 + (CA)n Simple_repeat Simple_repeat 2 58 0 2524 77 0 0 chr20 56211789 56212100 -10455905 + AluY SINE Alu 1 311 0 1447 90 25 5 chr20 56212117 56212318 -10455687 + L1PA7 LINE L1 5950 6154 0 180 0 0 0 chr20 56212420 56212440 -10455565 + (A)n Simple_repeat Simple_repeat 1 20 0 180 272 78 29 chr20 56213126 56213229 -10454776 + MIR SINE MIR 94 201 -61 26 50 0 0 chr20 56214599 56214639 -10453366 + AT_rich Low_complexity Low_complexity 1 40 0 443 289 116 0 chr20 56214958 56215148 -10452857 - MIR SINE MIR -3 259 48 203 255 20 0 chr20 56215441 56215492 -10452513 + L2 LINE L2 3261 3312 -1 263 379 65 0 chr20 56215914 56216038 -10451967 + L2 LINE L2 3141 3272 0 699 35 0 0 chr20 56216876 56216962 -10451043 + (TTCCC)n Simple_repeat Simple_repeat 4 89 0 351 136 0 0 chr20 56216966 56217025 -10450980 + (TCCC)n Simple_repeat Simple_repeat 4 62 0 194 297 14 27 chr20 56217434 56217508 -10450497 + MIR SINE MIR 81 153 -55 467 317 44 34 chr20 56217592 56217797 -10450208 - MIR SINE MIR -17 245 39 293 300 91 0 chr20 56217867 56217977 -10450028 + MIR SINE MIR 64 183 -79 546 306 118 37 chr20 56217997 56218294 -10449711 - MLT1I LTR MaLR 0 409 89 1100 190 34 0 chr20 56219337 56219574 -10448431 + L1MA7 LINE L1 6026 6270 -21 2395 98 0 9 chr20 56219575 56219890 -10448115 + AluSx SINE Alu 1 312 0 561 193 0 0 chr20 56219891 56220026 -10447979 + (TA)n Simple_repeat Simple_repeat 2 136 0 479 371 81 17 chr20 56220117 56220524 -10447481 + L2 LINE L2 2871 3303 -10 337 252 45 21 chr20 56220540 56220643 -10447362 - MIR SINE MIR -67 141 34 451 231 105 21 chr20 56220657 56220800 -10447205 - MIR SINE MIR -20 242 88 199 128 51 0 chr20 56221013 56221052 -10446953 + L2 LINE L2 3273 3313 0 196 182 0 68 chr20 56221185 56221229 -10446776 - MIR SINE MIR -110 152 112 525 250 67 49 chr20 56221309 56221525 -10446480 + MIR SINE MIR 36 254 -8 564 285 59 22 chr20 56221705 56221908 -10446097 + MIR SINE MIR 10 220 -42 2191 130 19 26 chr20 56221908 56222286 -10445719 + THE1C LTR MaLR 1 375 0 564 285 59 22 chr20 56222286 56222321 -10445684 + MIR SINE MIR 220 252 -10 2317 234 49 13 chr20 56222995 56223616 -10444389 + L1MB8 LINE L1 5426 6098 -80 1938 158 27 0 chr20 56223616 56223951 -10444054 - MER2 DNA MER2_type 0 344 1 2317 234 49 13 chr20 56223951 56224026 -10443979 + L1MB8 LINE L1 6098 6169 -9 850 250 31 46 chr20 56224075 56224467 -10443538 + L1MC5 LINE L1 6854 7239 -722 1451 185 0 11 chr20 56224469 56224729 -10443276 + AluJb SINE Alu 1 257 -55 189 0 0 0 chr20 56224748 56224769 -10443236 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 300 237 58 32 chr20 56224864 56225020 -10442985 + L1MC5 LINE L1 7369 7528 -433 21 0 0 0 chr20 56225068 56225089 -10442916 + AT_rich Low_complexity Low_complexity 1 21 0 1765 214 14 48 chr20 56225325 56225826 -10442179 + L1MC3 LINE L1 7131 7614 -171 352 73 0 266 chr20 56226196 56226305 -10441700 - MADE1 DNA Mariner 0 80 1 276 337 51 0 chr20 56227043 56227141 -10440864 + L2 LINE L2 3192 3294 -19 350 359 28 11 chr20 56228447 56228628 -10439377 - LTR33 LTR ERVL -12 509 326 1514 228 94 28 chr20 56228628 56229062 -10438943 + MLT2B1 LTR ERVL 15 477 -43 189 107 0 0 chr20 56229062 56229090 -10438915 + (TG)n Simple_repeat Simple_repeat 1 28 0 629 183 11 17 chr20 56229138 56229318 -10438687 + CT-rich Low_complexity Low_complexity 1 179 0 431 256 0 11 chr20 56229522 56229612 -10438393 - LTR33 LTR ERVL -372 149 61 1086 225 43 4 chr20 56230378 56230636 -10437369 + MER58B DNA MER1_type 74 341 0 420 81 40 0 chr20 56231119 56231193 -10436812 + CT-rich Low_complexity Low_complexity 2 78 0 484 94 0 0 chr20 56231453 56231541 -10436464 - Alu SINE Alu 0 313 226 2700 81 22 6 chr20 56231547 56231905 -10436100 + THE1B LTR MaLR 1 364 0 2192 99 0 0 chr20 56231960 56232268 -10435737 - AluSg SINE Alu 0 308 1 2213 59 7 18 chr20 56232279 56232589 -10435416 - AluY SINE Alu 0 307 1 248 224 0 0 chr20 56232853 56232902 -10435103 + (CAT)n Simple_repeat Simple_repeat 2 50 0 979 196 24 22 chr20 56234023 56234281 -10433724 - L1M4 LINE L1 -555 6017 5747 1139 155 53 0 chr20 56234305 56234511 -10433494 - L1PB1 LINE L1 -8 6143 5927 353 64 0 0 chr20 56234511 56234558 -10433447 + L1P5 LINE L1 5436 5482 -669 * 418 180 73 4 chr20 56234556 56234698 -10433307 - L1M4 LINE L1 -783 5757 5606 8941 214 76 15 chr20 56234786 56237100 -10430905 - L1M4 LINE L1 -4064 2476 23 1124 266 23 6 chr20 56237105 56237454 -10430551 - L1M4 LINE L1 -1932 4608 4254 2223 220 31 61 chr20 56237455 56237995 -10430010 - MER77 LTR ERV1 -72 533 10 459 340 116 63 chr20 56237997 56238839 -10429166 + L2 LINE L2 1970 2856 -458 236 324 88 104 chr20 56238872 56239236 -10428769 + L2 LINE L2 2912 3269 -3 737 172 35 12 chr20 56239768 56239937 -10428068 + MER96B DNA MER1_type? 2 174 -243 750 287 97 28 chr20 56240757 56241294 -10426711 - L1ME3A LINE L1 -213 5957 5384 1381 161 12 0 chr20 56241299 56241542 -10426463 - L1PA16 LINE L1 -9 6157 5912 490 283 92 44 chr20 56241824 56241984 -10426021 - L1ME3A LINE L1 -1303 4843 4692 1689 187 33 76 chr20 56241984 56242434 -10425571 - MSTB1 LTR MaLR -1 431 1 490 283 92 44 chr20 56242434 56242818 -10425187 - L1ME3A LINE L1 -1454 4692 4273 235 250 164 47 chr20 56243032 56243160 -10424845 + MIR SINE MIR 120 262 0 842 186 29 69 chr20 56243275 56243479 -10424526 - MER20 DNA MER1_type 0 219 24 207 0 0 0 chr20 56243932 56243955 -10424050 + (A)n Simple_repeat Simple_repeat 1 23 0 1471 227 57 60 chr20 56244809 56245262 -10422743 - MER67D LTR ERV1 -4 510 59 218 282 186 19 chr20 56245304 56245460 -10422545 + MIR SINE MIR 19 200 -62 841 253 67 32 chr20 56245868 56246240 -10421765 - L1ME3A LINE L1 -12 6158 5774 405 226 125 2 chr20 56246247 56246354 -10421651 - L1ME3A LINE L1 -503 5659 5543 260 245 197 7 chr20 56246365 56246512 -10421493 - L1ME3A LINE L1 -662 5500 5326 318 280 163 19 chr20 56246749 56247056 -10420949 + L1ME4a LINE L1 5704 6054 -67 199 275 0 117 chr20 56247970 56248090 -10419915 - L2 LINE L2 -40 3273 3168 553 192 108 0 chr20 56248090 56248210 -10419795 + MER6 DNA MER2_type 733 865 0 331 288 108 9 chr20 56248211 56248322 -10419683 + MER45B DNA AcHobo 311 432 -608 701 146 9 0 chr20 56248364 56248446 -10419559 + FLAM_A SINE Alu 21 106 -205 7470 32 2 1 chr20 56248446 56249774 -10418231 + L1PA4 LINE L1 4824 6152 -3 701 146 9 0 chr20 56249774 56249801 -10418204 + FLAM_A SINE Alu 106 131 -180 2091 192 13 5 chr20 56249818 56250203 -10417802 + MER65A LTR ERV1 38 425 -20 891 198 0 0 chr20 56250208 56250370 -10417635 - FRAM SINE Alu -14 162 1 2615 230 16 20 chr20 56250394 56251007 -10416998 + MER45B DNA AcHobo 430 1040 0 320 259 86 0 chr20 56251047 56251163 -10416842 - LTR33 LTR ERVL -62 459 334 418 290 62 28 chr20 56251202 56251378 -10416627 - LTR33 LTR ERVL -320 201 20 2142 236 126 39 chr20 56251390 56252112 -10415893 + MER21B LTR ERV1 1 785 -78 306 0 0 0 chr20 56253063 56253097 -10414908 + (TG)n Simple_repeat Simple_repeat 2 35 0 186 326 11 32 chr20 56253158 56253253 -10414752 - MIR SINE MIR -1 261 169 279 317 139 0 chr20 56253443 56253544 -10414461 + MLT1K LTR MaLR 145 259 -329 567 272 62 25 chr20 56253622 56253784 -10414221 + MER96 DNA MER1_type? 8 175 0 514 194 21 0 chr20 56253876 56253969 -10414036 - MER115 DNA AcHobo -1 692 598 371 56 19 0 chr20 56254992 56255046 -10412959 + (GA)n Simple_repeat Simple_repeat 2 56 0 759 198 36 72 chr20 56256254 56256476 -10411529 - MER20 DNA MER1_type -2 217 4 27 49 0 0 chr20 56257307 56257348 -10410657 + AT_rich Low_complexity Low_complexity 1 41 0 344 275 63 86 chr20 56257379 56257448 -10410557 - L1ME LINE L1 -5241 829 760 1244 248 122 67 chr20 56257448 56258179 -10409826 + LTR41 LTR ERVL 1 771 -2 344 275 63 86 chr20 56258179 56258411 -10409594 - L1ME LINE L1 -5310 760 535 843 308 82 33 chr20 56258895 56259417 -10408588 - MLT1H LTR MaLR -1 548 1 2170 51 0 0 chr20 56259522 56259777 -10408228 - AluY SINE Alu -11 300 46 37 52 0 0 chr20 56260275 56260333 -10407672 + AT_rich Low_complexity Low_complexity 1 58 0 2570 204 53 22 chr20 56260773 56261411 -10406594 + L1MB7 LINE L1 5527 6184 0 189 369 119 19 chr20 56261867 56262127 -10405878 - L2 LINE L2 -665 2649 2364 1944 146 10 0 chr20 56262199 56262493 -10405512 - AluSx SINE Alu -15 297 1 2396 64 0 0 chr20 56262502 56262828 -10405177 - AluY SINE Alu 0 326 1 2069 109 0 14 chr20 56262925 56263256 -10404749 + AluSg SINE Alu 2 328 0 180 296 0 0 chr20 56263601 56263645 -10404360 - L2 LINE L2 -2 3311 3268 329 313 98 6 chr20 56267156 56267319 -10400686 + MER5B DNA MER1_type 1 178 0 966 303 170 14 chr20 56267550 56268198 -10399807 - L2 LINE L2 -662 2652 1904 49 32 0 0 chr20 56268917 56268980 -10399025 + AT_rich Low_complexity Low_complexity 1 63 0 234 128 0 0 chr20 56269178 56269217 -10398788 + (CA)n Simple_repeat Simple_repeat 2 40 0 507 335 13 0 chr20 56269217 56269444 -10398561 - L1ME LINE L1 -321 5800 5571 797 235 0 12 chr20 56269569 56269735 -10398270 - MER66A LTR ERV1 -314 164 1 508 294 201 6 chr20 56270015 56270358 -10397647 + L2 LINE L2 2566 2975 -339 504 232 70 38 chr20 56270456 56270641 -10397364 - MIR SINE MIR -26 236 46 2125 127 3 13 chr20 56270643 56270958 -10397047 + AluSx SINE Alu 1 312 0 180 353 12 24 chr20 56271091 56271176 -10396829 + L2 LINE L2 3230 3313 0 2281 100 0 3 chr20 56271260 56271560 -10396445 + AluSg SINE Alu 1 299 -11 322 324 65 60 chr20 56271717 56271895 -10396110 - L1M4 LINE L1 -2839 3307 3131 3468 150 2 5 chr20 56271895 56272480 -10395525 + L1PA16 LINE L1 5576 6158 -8 322 324 65 60 chr20 56272480 56272881 -10395124 - L1M4 LINE L1 -3015 3131 2725 444 257 37 9 chr20 56273141 56273250 -10394755 - MIR SINE MIR -114 148 37 928 117 12 37 chr20 56273372 56273535 -10394470 - L1PA16 LINE L1 -119 6047 5889 317 375 48 0 chr20 56273687 56273855 -10394150 - L1ME LINE L1 -442 5679 5504 2181 157 8 16 chr20 56273978 56274354 -10393651 + THE1C LTR MaLR 1 373 -2 482 299 70 84 chr20 56274530 56275302 -10392703 - L1ME LINE L1 -1806 4340 3589 1193 173 44 0 chr20 56275348 56275574 -10392431 - L1P LINE L1 -1141 5005 4770 2258 82 0 0 chr20 56275574 56275875 -10392130 + L1PA12 LINE L1 5864 6168 0 503 294 93 36 chr20 56276060 56276397 -10391608 + L1ME2 LINE L1 4948 5301 -845 399 283 33 49 chr20 56276495 56276679 -10391326 - MER31A-int LTR ERV1 -4188 748 568 * 412 217 57 0 chr20 56276678 56276784 -10391221 + MER31-int LTR ERV1 55 166 -4770 1199 240 74 87 chr20 56276833 56277388 -10390617 - MER31A-int LTR ERV1 -4376 560 13 1123 171 18 12 chr20 56277454 56277713 -10390292 - MER31A LTR ERV1 -28 438 174 1988 157 128 8 chr20 56277716 56278092 -10389913 + MSTA LTR MaLR 3 423 -5 1029 168 35 0 chr20 56278097 56278270 -10389735 - MER31A LTR ERV1 -306 179 1 245 224 36 132 chr20 56278293 56278512 -10389493 - L1MC5 LINE L1 -405 7556 7359 1445 240 36 54 chr20 56278599 56279103 -10388902 + L1ME2 LINE L1 5440 5934 -230 23 33 0 0 chr20 56279357 56279387 -10388618 + AT_rich Low_complexity Low_complexity 1 30 0 758 119 45 8 chr20 56279546 56279680 -10388325 + L1MA7 LINE L1 6148 6286 -5 253 347 112 21 chr20 56279998 56280087 -10387918 - L2 LINE L2 -1038 2276 2197 1689 163 24 14 chr20 56280087 56280381 -10387624 + AluSx SINE Alu 8 304 -8 253 347 112 21 chr20 56280381 56280576 -10387429 - L2 LINE L2 -1117 2197 1966 29 28 0 0 chr20 56280633 56280669 -10387336 + AT_rich Low_complexity Low_complexity 1 36 0 490 253 58 70 chr20 56281175 56281416 -10386589 - L1MEc LINE L1 -3654 2475 2238 7976 213 21 11 chr20 56281605 56284279 -10383726 - L1PA16 LINE L1 -14 6152 3473 267 292 82 41 chr20 56284656 56284967 -10383038 - L1MEc LINE L1 -839 1651 1411 439 285 83 48 chr20 56285001 56285229 -10382776 - L1MEc LINE L1 -4894 1225 990 508 81 0 0 chr20 56285248 56285322 -10382683 - L1MA1 LINE L1 0 6302 6229 3642 152 65 11 chr20 56285329 56285961 -10382044 + MSTA-int LTR MaLR 910 1575 -5 1615 191 129 6 chr20 56285965 56286305 -10381700 + MSTA LTR MaLR 3 384 -44 882 197 50 8 chr20 56286305 56286544 -10381461 + L1PB3 LINE L1 1806 2054 -4809 6270 187 22 4 chr20 56286547 56288814 -10379191 + L1PB3 LINE L1 4562 6868 -2 2177 101 10 7 chr20 56289239 56289545 -10378460 - AluSc SINE Alu -2 307 1 21 0 0 0 chr20 56290182 56290203 -10377802 + AT_rich Low_complexity Low_complexity 1 21 0 456 361 0 31 chr20 56290846 56291037 -10376968 + MIR3 SINE MIR 21 205 -3 336 318 16 23 chr20 56291278 56291407 -10376598 - MIR SINE MIR -120 142 15 29 28 0 0 chr20 56291523 56291559 -10376446 + AT_rich Low_complexity Low_complexity 1 36 0 325 309 104 83 chr20 56291593 56291706 -10376299 - MLT1K LTR MaLR -150 438 329 1935 166 14 11 chr20 56291706 56292067 -10375938 + MLT1A1 LTR MaLR 4 365 0 325 309 104 83 chr20 56292067 56292289 -10375716 - MLT1K LTR MaLR -259 329 96 211 265 0 0 chr20 56293457 56293506 -10374499 + L2 LINE L2 3261 3309 -4 712 314 18 18 chr20 56294820 56295103 -10372902 - MLT1K LTR MaLR 0 588 306 1001 267 73 57 chr20 56295301 56295724 -10372281 + MLT1J1 LTR MaLR 1 430 -16 1143 260 104 13 chr20 56295867 56296336 -10371669 - L1M4 LINE L1 -994 5650 5139 * 4224 189 66 11 chr20 56296335 56297286 -10370719 - L1MC3 LINE L1 -942 6843 5840 1974 142 0 13 chr20 56297314 56297617 -10370388 - AluY SINE Alu -6 305 7 44152 39 0 3 chr20 56297770 56303935 -10364070 - L1PA3 LINE L1 0 6155 9 788 319 46 15 chr20 56303939 56304615 -10363390 - L1ME LINE L1 -4921 1621 967 21 36 0 0 chr20 56305557 56305585 -10362420 + AT_rich Low_complexity Low_complexity 1 28 0 2082 50 0 29 chr20 56305783 56306063 -10361942 - L1PA5 LINE L1 0 6154 5883 440 37 0 0 chr20 56306063 56306117 -10361888 + L1PA5 LINE L1 5803 5856 -298 1024 222 26 72 chr20 56306155 56306502 -10361503 - L1MB5 LINE L1 -277 5897 5567 22 35 0 0 chr20 56306616 56306645 -10361360 + AT_rich Low_complexity Low_complexity 1 29 0 195 42 0 0 chr20 56307263 56307287 -10360718 + (T)n Simple_repeat Simple_repeat 1 24 0 318 215 111 42 chr20 56307401 56307545 -10360460 - L1ME4a LINE L1 0 6121 5968 219 253 23 58 chr20 56307637 56307724 -10360281 + L2 LINE L2 2716 2799 -515 22 0 0 0 chr20 56308632 56308654 -10359351 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr20 56308842 56308873 -10359132 + AT_rich Low_complexity Low_complexity 1 31 0 26 0 0 0 chr20 56309110 56309136 -10358869 + AT_rich Low_complexity Low_complexity 1 26 0 267 151 54 75 chr20 56309587 56309680 -10358325 + Zaphod DNA AcHobo 3625 3715 -316 1307 186 22 0 chr20 56309693 56309919 -10358086 + AluJo SINE Alu 13 243 -69 357 98 0 0 chr20 56309987 56310038 -10357967 + AluJo SINE Alu 242 292 -10 1955 178 15 0 chr20 56310048 56310390 -10357615 + MER7A DNA MER2_type 2 346 0 681 301 21 0 chr20 56310395 56310631 -10357374 + Zaphod DNA AcHobo 3751 3991 -40 2130 110 3 10 chr20 56310916 56311215 -10356790 - AluY SINE Alu -14 297 1 1751 221 31 22 chr20 56311314 56311803 -10356202 - L1MA9 LINE L1 -37 6275 5783 229 205 96 0 chr20 56311816 56311899 -10356106 + L1MC4 LINE L1 6613 6703 -1339 258 192 39 26 chr20 56311910 56311978 -10356027 + (TA)n Simple_repeat Simple_repeat 2 74 -6 1917 137 0 4 chr20 56311978 56312287 -10355718 - AluSx SINE Alu 0 313 6 258 192 39 26 chr20 56312287 56312295 -10355710 + (TA)n Simple_repeat Simple_repeat 74 80 0 409 163 11 43 chr20 56312295 56312387 -10355618 + L1MA7 LINE L1 5782 5870 -421 180 0 0 0 chr20 56312391 56312411 -10355594 + (TA)n Simple_repeat Simple_repeat 2 21 0 6515 203 56 4 chr20 56312433 56313907 -10354098 - L1MA9 LINE L1 -532 5780 4167 270 0 0 0 chr20 56313907 56313937 -10354068 + (TG)n Simple_repeat Simple_repeat 1 30 0 6515 203 56 4 chr20 56313937 56314523 -10353482 - L1MA9 LINE L1 -2145 4167 3613 260 286 129 50 chr20 56315133 56315273 -10352732 - L2 LINE L2 0 3313 3163 212 290 16 32 chr20 56315718 56315780 -10352225 + MER5A DNA MER1_type 69 129 -60 327 322 35 55 chr20 56315803 56316092 -10351913 - L2 LINE L2 -836 2478 2196 3546 139 3 60 chr20 56316441 56317086 -10350919 + HSMAR2 DNA Mariner 1 608 -694 39 0 0 0 chr20 56317086 56317125 -10350880 + AT_rich Low_complexity Low_complexity 1 39 0 2026 132 3 9 chr20 56317125 56317451 -10350554 - L1PB1 LINE L1 0 6151 5828 2029 134 137 11 chr20 56317718 56318098 -10349907 + MSTA LTR MaLR 1 428 0 183 42 0 0 chr20 56318311 56318335 -10349670 + (CAT)n Simple_repeat Simple_repeat 1 24 0 1945 14 0 0 chr20 56318736 56318954 -10349051 - L1P1 LINE L1 -377 5778 5561 1534 39 0 0 chr20 56318954 56319134 -10348871 + L1PA3 LINE L1 5972 6152 -3 230 263 25 12 chr20 56319880 56319960 -10348045 - MIR SINE MIR -103 159 79 406 281 63 50 chr20 56320454 56320675 -10347330 + MLT1K LTR MaLR 342 565 -23 212 301 117 56 chr20 56321379 56321575 -10346430 + MIR SINE MIR 23 230 -32 303 325 123 26 chr20 56321674 56321828 -10346177 + MIR3 SINE MIR 30 198 -10 23791 115 13 4 chr20 56322135 56325903 -10342102 + L1PA8 LINE L1 1694 5498 -674 2240 100 0 0 chr20 56325903 56326193 -10341812 + AluSc SINE Alu 3 292 -17 23791 115 13 4 chr20 56326193 56326859 -10341146 + L1PA8 LINE L1 5498 6157 -15 378 0 0 0 chr20 56326864 56326906 -10341099 + (TAA)n Simple_repeat Simple_repeat 3 44 0 23 0 0 0 chr20 56326980 56327003 -10341002 + AT_rich Low_complexity Low_complexity 1 23 0 2055 86 50 4 chr20 56327768 56328046 -10339959 + AluSg SINE Alu 1 291 -19 762 206 0 0 chr20 56328702 56328928 -10339077 + (CA)n Simple_repeat Simple_repeat 1 226 0 357 24 0 0 chr20 56329867 56329909 -10338096 + (CA)n Simple_repeat Simple_repeat 1 42 0 201 162 0 0 chr20 56330914 56330951 -10337054 + (TGAA)n Simple_repeat Simple_repeat 3 39 0 375 276 123 12 chr20 56331588 56331751 -10336254 + MLT1K LTR MaLR 401 581 -7 22 0 0 0 chr20 56332331 56332353 -10335652 + AT_rich Low_complexity Low_complexity 1 22 0 981 232 35 72 chr20 56332481 56332693 -10335312 + MER87 LTR ERV1 174 370 -171 1852 170 0 0 chr20 56332693 56333010 -10334995 + AluSx SINE Alu 6 312 0 981 232 35 72 chr20 56333010 56333142 -10334863 + MER87 LTR ERV1 370 505 -36 1774 133 28 25 chr20 56333196 56333482 -10334523 - AluSx SINE Alu -15 297 11 334 0 21 21 chr20 56333524 56333571 -10334434 + (TG)n Simple_repeat Simple_repeat 2 48 0 263 307 0 27 chr20 56333719 56333794 -10334211 + MER5A DNA MER1_type 7 79 -110 337 315 20 20 chr20 56334180 56334326 -10333679 + MIR SINE MIR 76 221 -41 1536 68 45 0 chr20 56334559 56334780 -10333225 - L1MA1 LINE L1 0 6302 6072 422 315 34 0 chr20 56334896 56335042 -10332963 + L2 LINE L2 3163 3313 0 398 296 160 0 chr20 56335409 56335615 -10332390 + MER102a DNA MER1_type 92 330 0 29 0 0 0 chr20 56336442 56336471 -10331534 + AT_rich Low_complexity Low_complexity 1 29 0 355 259 0 44 chr20 56337073 56337208 -10330797 - L1ME3A LINE L1 -204 5966 5838 237 304 0 0 chr20 56337221 56337277 -10330728 + MER58 DNA MER1_type 1 56 -159 24 32 0 0 chr20 56337340 56337371 -10330634 + AT_rich Low_complexity Low_complexity 1 31 0 320 163 288 0 chr20 56337371 56337451 -10330554 + MER58 DNA MER1_type 2318 2420 0 250 328 133 26 chr20 56337534 56337729 -10330276 - L1ME3A LINE L1 -2063 5745 5530 233 241 35 0 chr20 56340392 56340450 -10327555 + CT-rich Low_complexity Low_complexity 5 64 0 292 308 60 20 chr20 56340533 56340693 -10327312 + MIR SINE MIR 46 213 -49 192 281 112 112 chr20 56340849 56341045 -10326960 - MIR SINE MIR -44 218 23 526 184 37 105 chr20 56341663 56341719 -10326286 - L1MD1 LINE L1 -159 6083 6025 1622 188 3 16 chr20 56341719 56342027 -10325978 - AluJb SINE Alu -6 306 3 526 184 37 105 chr20 56342027 56342160 -10325845 - L1MD1 LINE L1 -217 6025 5907 186 316 51 41 chr20 56342403 56342501 -10325504 + L3 LINE CR1 949 1047 -530 389 299 103 8 chr20 56343147 56343264 -10324741 - L2 LINE L2 0 3313 3186 201 328 15 0 chr20 56343279 56343346 -10324659 - MIR SINE MIR -3 259 192 1192 244 122 0 chr20 56344462 56344803 -10323202 - LTR16A1 LTR ERVL -31 426 44 2392 159 42 31 chr20 56344803 56345256 -10322749 - MER66B LTR ERV1 0 486 29 323 260 58 58 chr20 56345946 56346100 -10321905 - MIR SINE MIR -21 241 88 584 288 119 102 chr20 56346268 56346990 -10321015 - L2 LINE L2 -337 2977 2244 25 75 0 0 chr20 56347207 56347260 -10320745 + AT_rich Low_complexity Low_complexity 1 53 0 31 0 0 0 chr20 56348036 56348067 -10319938 + AT_rich Low_complexity Low_complexity 1 31 0 513 242 97 67 chr20 56348373 56348642 -10319363 + LTR33 LTR ERVL 185 461 -60 238 239 30 30 chr20 56349204 56349226 -10318779 + LTR67 LTR ERVL 491 557 0 260 156 22 0 chr20 56349226 56349271 -10318734 + MLT1K LTR MaLR 543 588 0 261 217 0 33 chr20 56349329 56349389 -10318616 + MER3 DNA MER1_type 2 59 -150 767 159 0 36 chr20 56349396 56349534 -10318471 + FLAM_C SINE Alu 1 133 0 521 270 72 0 chr20 56349565 56349717 -10318288 + MER3 DNA MER1_type 46 208 -1 250 243 14 0 chr20 56350071 56350141 -10317864 + (TTCA)n Simple_repeat Simple_repeat 1 71 0 265 265 15 0 chr20 56350421 56350489 -10317516 + MIR SINE MIR 194 262 0 354 256 0 11 chr20 56350501 56350591 -10317414 + L2 LINE L2 2338 2426 -888 1058 261 40 51 chr20 56350591 56350963 -10317042 - LTR16A LTR ERVL 0 450 83 1117 314 96 30 chr20 56351045 56351826 -10316179 + L2 LINE L2 2419 3234 -79 23905 50 3 1 chr20 56351826 56355646 -10312359 - L1PA5 LINE L1 0 6154 2326 203 333 0 30 chr20 56355739 56355805 -10312200 + L2 LINE L2 3250 3313 0 1450 219 67 77 chr20 56355955 56356513 -10311492 + MLT1E2 LTR MaLR 69 589 -37 357 125 0 0 chr20 56356532 56356588 -10311417 + (CA)n Simple_repeat Simple_repeat 2 57 0 654 292 65 4 chr20 56357528 56357805 -10310200 + L1MC5 LINE L1 5541 5834 -1974 763 260 96 35 chr20 56357814 56358210 -10309795 + L1MC5 LINE L1 7076 7495 -466 844 290 40 40 chr20 56358236 56358632 -10309373 + L1MDa LINE L1 21 416 -6124 623 262 58 58 chr20 56358977 56359305 -10308700 + L1MDa LINE L1 2015 2342 -4198 837 305 24 12 chr20 56359309 56359729 -10308276 + L1MDa LINE L1 3617 4041 -2499 518 258 48 43 chr20 56359819 56360005 -10308000 - MLT1A2 LTR MaLR -187 187 1 612 154 128 25 chr20 56360007 56360219 -10307786 + L1MC/D LINE L1 5265 5495 -667 1544 156 112 7 chr20 56361729 56362005 -10306000 + AluSg1 SINE Alu 1 305 -4 25 31 0 0 chr20 56362045 56362077 -10305928 + AT_rich Low_complexity Low_complexity 1 32 0 840 239 155 22 chr20 56362817 56363139 -10304866 - MLT1A1 LTR MaLR 0 365 1 582 293 122 41 chr20 56363312 56363797 -10304208 - L2 LINE L2 -18 3295 2674 2521 60 0 0 chr20 56363797 56364098 -10303907 + AluY SINE Alu 1 301 -10 582 293 122 41 chr20 56364098 56364147 -10303858 - L2 LINE L2 -639 2674 2630 * 651 271 19 7 chr20 56364140 56364295 -10303710 + MIR SINE MIR 76 232 -30 1959 126 0 11 chr20 56364312 56364621 -10303384 - AluSx SINE Alu 0 306 1 701 292 131 30 chr20 56364642 56364940 -10303065 - L2 LINE L2 -691 2623 2296 362 339 38 15 chr20 56365588 56365732 -10302273 - MIR SINE MIR -72 136 7 2088 120 3 13 chr20 56365808 56366107 -10301898 - AluSx SINE Alu -16 296 1 345 125 0 0 chr20 56366989 56367045 -10300960 + (TG)n Simple_repeat Simple_repeat 1 56 0 234 292 21 10 chr20 56367425 56367521 -10300484 + LTR67 LTR ERVL 459 555 -2 2043 92 31 41 chr20 56367672 56367965 -10300040 - AluSc SINE Alu -19 290 1 1253 263 91 39 chr20 56368615 56369129 -10298876 - MLT1H LTR MaLR -8 541 1 266 269 106 19 chr20 56369130 56369234 -10298771 - MIR SINE MIR -25 237 125 233 219 12 98 chr20 56369694 56369776 -10298229 - L3 LINE CR1 -177 1400 1326 787 261 58 23 chr20 56369780 56370037 -10297968 + L2 LINE L2 3048 3313 0 257 359 72 19 chr20 56370093 56370302 -10297703 - L3 LINE CR1 -870 707 488 201 167 0 0 chr20 56371958 56371994 -10296011 + (CAAT)n Simple_repeat Simple_repeat 1 36 0 27 0 0 0 chr20 56372268 56372295 -10295710 + AT_rich Low_complexity Low_complexity 1 27 0 182 302 19 19 chr20 56372378 56372431 -10295574 - L2 LINE L2 -19 3294 3242 229 309 69 39 chr20 56373225 56373429 -10294576 - MLT1K LTR MaLR 0 588 379 412 330 97 37 chr20 56374431 56375160 -10292845 + L2 LINE L2 2540 3312 -1 4367 212 66 27 chr20 56375410 56377473 -10290532 + L1MB7 LINE L1 4022 6168 -16 184 229 33 82 chr20 56377540 56377601 -10290404 - MIR SINE MIR -182 80 23 22 35 0 0 chr20 56378462 56378491 -10289514 + AT_rich Low_complexity Low_complexity 1 29 0 411 315 76 66 chr20 56378891 56379341 -10288664 - L2 LINE L2 -66 3247 2790 234 0 0 0 chr20 56379381 56379407 -10288598 + (A)n Simple_repeat Simple_repeat 1 26 0 730 167 0 23 chr20 56379419 56379578 -10288427 + FLAM_C SINE Alu 1 133 0 267 364 0 8 chr20 56379689 56379807 -10288198 + MIR SINE MIR 80 196 -66 592 137 0 26 chr20 56380009 56380126 -10287879 - L1PA15 LINE L1 0 6165 6052 2300 200 57 0 chr20 56380147 56380675 -10287330 - L1PA13 LINE L1 -3537 3260 2710 3462 142 6 30 chr20 56380675 56381149 -10286856 - MER1A DNA MER1_type -2173 529 68 3225 99 15 9 chr20 56381149 56381613 -10286392 - L1PA11 LINE L1 0 6174 5708 3462 142 6 30 chr20 56381613 56381680 -10286325 - MER1A DNA MER1_type -2634 68 1 3738 212 59 52 chr20 56381680 56383089 -10284916 - L1PA13 LINE L1 -4080 2717 1274 25342 152 13 18 chr20 56383114 56388809 -10279196 + L1PA8A LINE L1 756 6434 -12 25 31 0 0 chr20 56388809 56388841 -10279164 + AT_rich Low_complexity Low_complexity 1 32 0 249 364 40 31 chr20 56388966 56389194 -10278811 - L1MEc LINE L1 -5780 616 387 2556 176 32 8 chr20 56389195 56389695 -10278310 - L1M3 LINE L1 -374 5794 5283 * 3368 229 66 4 chr20 56389694 56390604 -10277401 + L1 LINE L1 4385 5350 -796 236 260 135 0 chr20 56390604 56390700 -10277305 - L1MEc LINE L1 -6251 145 37 1819 218 57 29 chr20 56392064 56392518 -10275487 - MLT1C LTR MaLR 0 467 1 2028 133 77 11 chr20 56392703 56393055 -10274950 - THE1C LTR MaLR 0 375 1 1643 196 3 0 chr20 56393692 56393978 -10274027 - AluJo SINE Alu -21 291 5 189 300 45 36 chr20 56394215 56394325 -10273680 + L2 LINE L2 2826 2936 -336 276 341 34 34 chr20 56394417 56394596 -10273409 + L2 LINE L2 3135 3313 0 559 307 24 0 chr20 56394801 56394967 -10273038 - MER96 DNA MER1_type? -5 170 1 637 168 69 17 chr20 56395051 56395224 -10272781 - MER53 DNA DNA 0 189 8 2013 287 94 34 chr20 56396365 56396842 -10271163 - L2 LINE L2 -92 3221 2774 2055 110 46 0 chr20 56396842 56397123 -10270882 - AluSx SINE Alu -18 294 1 2013 287 94 34 chr20 56397123 56397704 -10270301 - L2 LINE L2 -539 2774 2086 251 304 96 22 chr20 56397711 56397846 -10270159 - MER20 DNA MER1_type -4 215 71 2062 223 32 84 chr20 56398558 56398895 -10269110 - L1ME2 LINE L1 -168 5996 5714 182 88 0 29 chr20 56398895 56398929 -10269076 + (TA)n Simple_repeat Simple_repeat 2 34 0 2062 223 32 84 chr20 56398929 56399301 -10268704 - L1ME2 LINE L1 -450 5714 5324 21 0 0 0 chr20 56399442 56399463 -10268542 + AT_rich Low_complexity Low_complexity 1 21 0 779 264 0 6 chr20 56401052 56401230 -10266775 + MER58B DNA MER1_type 164 340 -1 479 293 98 14 chr20 56401461 56401676 -10266329 + MLT1J LTR MaLR 71 303 -208 431 268 110 12 chr20 56402779 56402841 -10265164 - MER5A DNA MER1_type 0 189 134 2152 121 0 13 chr20 56402841 56403154 -10264851 + AluSx SINE Alu 1 309 -3 431 268 110 12 chr20 56403154 56403255 -10264750 - MER5A DNA MER1_type -55 134 10 240 258 96 48 chr20 56403490 56403680 -10264325 + MIR SINE MIR 10 204 -58 409 323 18 6 chr20 56405338 56405502 -10262503 - MER117 DNA MER1_type -31 166 1 311 258 94 106 chr20 56405955 56406211 -10261794 - MLT1I LTR MaLR -118 291 39 576 321 82 8 chr20 56406517 56406760 -10261245 - MLT1K LTR MaLR 0 588 328 288 0 0 0 chr20 56407086 56407118 -10260887 + (A)n Simple_repeat Simple_repeat 1 32 0 308 293 24 0 chr20 56408010 56408133 -10259872 - L1MC4 LINE L1 -3 8039 7914 1717 218 58 55 chr20 56408135 56408767 -10259238 - L1MC4 LINE L1 -161 7881 7248 367 341 41 5 chr20 56408994 56409166 -10258839 + MIR SINE MIR 23 198 -62 576 314 73 4 chr20 56409378 56409639 -10258366 - L2 LINE L2 -337 2977 2699 1645 220 51 12 chr20 56409647 56410061 -10257944 + MLT1C LTR MaLR 1 430 -37 250 359 51 0 chr20 56410126 56410243 -10257762 - L2 LINE L2 -685 2629 2507 273 250 0 24 chr20 56410244 56410328 -10257677 + MER94 DNA DNA 10 91 -43 582 280 129 42 chr20 56410376 56410687 -10257318 - L2 LINE L2 -832 2482 2145 211 276 26 13 chr20 56410886 56410962 -10257043 - MER5A DNA MER1_type -58 131 55 23 97 0 0 chr20 56411837 56411909 -10256096 + AT_rich Low_complexity Low_complexity 1 72 0 250 214 214 39 chr20 56412108 56412211 -10255794 - L2 LINE L2 -1 3312 3192 2998 235 72 29 chr20 56412433 56414289 -10253716 - L1MD2 LINE L1 -4 6355 4420 231 209 0 0 chr20 56414345 56414388 -10253617 + (CA)n Simple_repeat Simple_repeat 2 44 0 204 360 8 24 chr20 56414765 56414890 -10253115 + L2 LINE L2 3191 3313 0 2282 110 0 0 chr20 56414896 56415204 -10252801 + AluSx SINE Alu 1 308 -4 348 306 126 47 chr20 56415319 56415747 -10252258 - L1ME4a LINE L1 -198 5923 5462 671 297 137 42 chr20 56416033 56416059 -10251946 + MLT1J2 LTR MaLR 2 24 -426 210 37 0 0 chr20 56416059 56416086 -10251919 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 671 297 137 42 chr20 56416086 56416440 -10251565 + MLT1J2 LTR MaLR 24 418 -32 2541 68 0 0 chr20 56416854 56417164 -10250841 - AluY SINE Alu -1 310 1 203 159 32 16 chr20 56417446 56417509 -10250496 + (TAA)n Simple_repeat Simple_repeat 1 64 0 51 0 0 0 chr20 56417542 56417593 -10250412 + AT_rich Low_complexity Low_complexity 1 51 0 2344 166 42 30 chr20 56418649 56418678 -10249327 - MER34 LTR ERV1 -9 533 506 198 118 0 0 chr20 56418678 56418712 -10249293 + (TTG)n Simple_repeat Simple_repeat 1 34 0 2344 166 42 30 chr20 56418712 56419153 -10248852 - MER34 LTR ERV1 -36 506 57 198 374 93 29 chr20 56421056 56421195 -10246810 + L2 LINE L2 3125 3272 0 1977 155 0 0 chr20 56422113 56422416 -10245589 - AluSx SINE Alu -6 306 4 183 80 0 0 chr20 56422847 56422872 -10245133 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 195 69 0 0 chr20 56423184 56423213 -10244792 + (CATA)n Simple_repeat Simple_repeat 2 30 0 621 279 152 39 chr20 56423218 56423573 -10244432 + MLT1J LTR MaLR 113 507 -4 1190 144 14 24 chr20 56423772 56423980 -10244025 + MER2 DNA MER2_type 1 206 -139 31 26 0 0 chr20 56423990 56424028 -10243977 + AT_rich Low_complexity Low_complexity 1 38 0 284 288 0 0 chr20 56424028 56424087 -10243918 + MER2 DNA MER2_type 286 344 -1 861 360 22 18 chr20 56424304 56424754 -10243251 + L2 LINE L2 2455 2906 -408 488 333 147 27 chr20 56424821 56425223 -10242782 + L2 LINE L2 2856 3305 -8 225 0 0 0 chr20 56425242 56425267 -10242738 + (TTAA)n Simple_repeat Simple_repeat 1 25 0 18993 43 0 2 chr20 56426432 56428686 -10239319 + HERV17 LTR ERV1 3402 5651 -2975 12664 50 1 0 chr20 56428675 56430191 -10237814 + HERV17 LTR ERV1 7110 8626 0 * 2667 52 0 0 chr20 56430191 56430517 -10237488 + LTR17 LTR ERV1 1 326 -454 980 74 12 25 chr20 56431038 56431200 -10236805 + (GAAA)n Simple_repeat Simple_repeat 1 160 0 225 372 61 24 chr20 56431423 56431587 -10236418 + MER5A DNA MER1_type 1 170 -19 193 310 136 58 chr20 56433035 56433190 -10234815 + L2 LINE L2 2565 2731 -583 967 138 36 26 chr20 56433346 56433541 -10234464 - MER65A LTR ERV1 0 445 249 6727 51 8 1 chr20 56433544 56434392 -10233613 + L1PA7 LINE L1 5301 6154 0 197 267 69 84 chr20 56435875 56436006 -10231999 - MIR SINE MIR -50 212 84 242 94 0 0 chr20 56437388 56437420 -10230585 - MER20 DNA MER1_type -4 215 184 23 54 0 0 chr20 56437420 56437457 -10230548 + AT_rich Low_complexity Low_complexity 1 37 0 517 188 11 145 chr20 56437463 56437649 -10230356 - MER20 DNA MER1_type -45 174 14 410 315 39 8 chr20 56437709 56437836 -10230169 + L2 LINE L2 3183 3313 0 388 378 0 0 chr20 56439169 56439288 -10228717 + MIR SINE MIR 27 145 -117 2155 173 42 22 chr20 56439346 56439804 -10228201 + MLT1C LTR MaLR 1 467 0 618 258 53 11 chr20 56439814 56440004 -10228001 + L1MD2 LINE L1 6162 6359 0 550 316 117 53 chr20 56440836 56441386 -10226619 - L2 LINE L2 0 3313 2734 222 339 89 24 chr20 56441561 56441685 -10226320 + MIR SINE MIR 14 145 -117 394 279 19 10 chr20 56441838 56441942 -10226063 + L2 LINE L2 3168 3272 0 251 321 114 26 chr20 56442660 56442853 -10225152 + MIR SINE MIR 53 262 0 2083 241 126 58 chr20 56443029 56444454 -10223551 + L1ME2 LINE L1 3842 5418 -746 405 0 0 0 chr20 56444454 56444499 -10223506 + (CA)n Simple_repeat Simple_repeat 2 46 0 2083 241 126 58 chr20 56444499 56444941 -10223064 + L1ME2 LINE L1 5418 5828 -336 574 271 16 32 chr20 56444947 56445135 -10222870 + L1ME2 LINE L1 5961 6145 -19 297 293 86 45 chr20 56447060 56447282 -10220723 + L2 LINE L2 2130 2360 -954 318 355 75 22 chr20 56447419 56447737 -10220268 + L2 LINE L2 2394 2728 -586 264 312 118 0 chr20 56447745 56447838 -10220167 + MIR SINE MIR 3 106 -156 * 693 238 67 21 chr20 56447836 56448029 -10219976 + MIR SINE MIR 7 208 -54 287 280 34 8 chr20 56448295 56448413 -10219592 + (TA)n Simple_repeat Simple_repeat 1 121 0 3645 161 21 36 chr20 56448413 56449160 -10218845 - L1MA8 LINE L1 -64 6227 5492 7222 162 18 26 chr20 56449164 56450590 -10217415 - L1MA8 LINE L1 -1086 5060 3646 523 342 69 74 chr20 56450593 56450985 -10217020 + L2 LINE L2 2882 3271 -1 31 0 0 0 chr20 56451923 56451954 -10216051 + AT_rich Low_complexity Low_complexity 1 31 0 378 74 0 0 chr20 56452178 56452232 -10215773 + (TCCA)n Simple_repeat Simple_repeat 4 57 0 1541 252 149 21 chr20 56453427 56453991 -10214014 + MLT2F LTR ERVL 28 663 0 231 156 22 22 chr20 56455273 56455318 -10212687 - MIR SINE MIR -60 148 104 201 74 0 0 chr20 56455432 56455459 -10212546 + (GAA)n Simple_repeat Simple_repeat 1 27 0 515 234 45 0 chr20 56455963 56456074 -10211931 + MIR SINE MIR 60 175 -87 188 349 30 45 chr20 56456042 56456174 -10211831 + MER5A DNA MER1_type 30 159 -30 * 333 149 27 54 chr20 56456253 56456327 -10211678 - MIR SINE MIR 0 262 191 831 258 90 16 chr20 56456838 56457082 -10210923 + MIR SINE MIR 1 262 0 327 331 48 21 chr20 56457132 56457277 -10210728 - MER5A DNA MER1_type -1 188 40 208 371 59 53 chr20 56457335 56457457 -10210548 - MER5A DNA MER1_type -1 188 63 10660 29 0 1 chr20 56457457 56459502 -10208503 - L1PA3 LINE L1 -1 6154 4112 208 371 59 53 chr20 56459502 56459549 -10208456 - MER5A DNA MER1_type -126 63 18 273 75 0 0 chr20 56460844 56460884 -10207121 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 552 294 53 84 chr20 56460983 56461377 -10206628 - L2 LINE L2 -1 3312 2931 383 200 0 0 chr20 56461662 56461737 -10206268 - L1MC4 LINE L1 -5 8037 7963 * 2114 259 70 58 chr20 56461733 56462850 -10205155 - L1MC4 LINE L1 -163 7739 6484 491 349 138 7 chr20 56463837 56464135 -10203870 - L2 LINE L2 -5 3308 2972 2122 124 0 19 chr20 56464855 56465170 -10202835 + AluSx SINE Alu 1 309 -3 303 315 82 47 chr20 56466162 56466441 -10201564 + L2 LINE L2 3025 3313 0 2172 101 3 0 chr20 56466493 56466779 -10201226 + AluSx SINE Alu 1 287 -25 238 320 177 27 chr20 56467477 56467624 -10200381 + L2 LINE L2 3104 3272 0 21 0 0 0 chr20 56467963 56467984 -10200021 + AT_rich Low_complexity Low_complexity 1 21 0 224 339 0 0 chr20 56468095 56468157 -10199848 - L2 LINE L2 -22 3291 3230 3830 80 4 0 chr20 56468680 56469193 -10198812 - L1PA10 LINE L1 0 6168 5654 557 315 98 58 chr20 56469454 56469933 -10198072 + MLT1J LTR MaLR 12 509 -2 564 282 28 28 chr20 56471362 56471543 -10196462 + MIR SINE MIR 7 187 -75 301 398 18 0 chr20 56472133 56472246 -10195759 - L2 LINE L2 -13 3259 3145 339 239 14 0 chr20 56472647 56472718 -10195287 - L2 LINE L2 -5 3308 3237 26 30 0 0 chr20 56472762 56472795 -10195210 + AT_rich Low_complexity Low_complexity 1 33 0 243 316 32 11 chr20 56472957 56473052 -10194953 + MER5B DNA MER1_type 81 177 -1 423 0 0 0 chr20 56473910 56473957 -10194048 + (TG)n Simple_repeat Simple_repeat 1 47 0 310 258 204 0 chr20 56474097 56474229 -10193776 + MIR SINE MIR 73 231 -31 3073 188 17 57 chr20 56474233 56474522 -10193483 + L1MC3 LINE L1 6142 5871 -473 2139 164 76 0 chr20 56474522 56474918 -10193087 + MSTB LTR MaLR 1 426 0 3073 188 17 57 chr20 56474918 56475374 -10192631 + L1MC3 LINE L1 5870 6343 -1 183 189 0 0 chr20 56475382 56475419 -10192586 + MIR SINE MIR 216 252 -10 722 312 126 23 chr20 56475626 56476104 -10191901 - MLT1L LTR MaLR -73 542 16 4366 250 59 16 chr20 56476159 56476399 -10191606 + L1MD1 LINE L1 18 246 -6294 216 97 0 0 chr20 56476399 56476430 -10191575 + (CA)n Simple_repeat Simple_repeat 1 31 0 4366 250 59 16 chr20 56476430 56477104 -10190901 + L1MD1 LINE L1 246 1001 -5539 188 33 0 33 chr20 56477104 56477134 -10190871 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4366 250 59 16 chr20 56477134 56477436 -10190569 + L1MD1 LINE L1 1001 1288 -5252 4024 206 85 35 chr20 56477442 56478772 -10189233 + L1MD1 LINE L1 1362 2803 -3918 2035 132 156 5 chr20 56478772 56479144 -10188861 + MSTA LTR MaLR 1 428 0 4024 206 85 35 chr20 56479144 56479193 -10188812 + L1MD1 LINE L1 2803 2848 -3873 11896 183 14 13 chr20 56479242 56479866 -10188139 - L1MA3 LINE L1 -101 7623 7001 1593 168 60 46 chr20 56479866 56480236 -10187769 - THE1C LTR MaLR 0 375 1 11896 183 14 13 chr20 56480236 56481961 -10186044 - L1MA3 LINE L1 -723 7001 5100 419 0 20 0 chr20 56481961 56482012 -10185993 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 11896 183 14 13 chr20 56482012 56482910 -10185095 - L1MA3 LINE L1 -2624 5100 4204 19867 170 29 12 chr20 56482915 56484678 -10183327 - L1MA3 LINE L1 -3944 3621 1890 2240 111 0 3 chr20 56484678 56484984 -10183021 - AluSg SINE Alu -5 305 1 19867 170 29 12 chr20 56484984 56486769 -10181236 - L1MA3 LINE L1 -5675 1890 12 1248 219 10 72 chr20 56486780 56487278 -10180727 + L1MD1 LINE L1 2824 3290 -3250 * 3877 240 86 47 chr20 56487274 56488009 -10179996 + L1MD1 LINE L1 3701 4406 -2230 2141 130 3 0 chr20 56488009 56488310 -10179695 + AluSc SINE Alu 1 302 -7 3877 240 86 47 chr20 56488310 56488661 -10179344 + L1MD1 LINE L1 4406 4742 -1894 2190 125 3 0 chr20 56488661 56488972 -10179033 - AluSx SINE Alu 0 312 1 3877 240 86 47 chr20 56488972 56489168 -10178837 + L1MD1 LINE L1 4742 4929 -1707 1863 168 36 33 chr20 56489168 56489531 -10178474 + THE1B LTR MaLR 1 364 0 3877 240 86 47 chr20 56489531 56489802 -10178203 + L1MD1 LINE L1 4929 5188 -1448 3346 5 13 0 chr20 56489802 56490233 -10177772 + L1PA2 LINE L1 5760 6195 0 3877 240 86 47 chr20 56490233 56491504 -10176501 + L1MD1 LINE L1 5188 6630 -6 1529 118 61 39 chr20 56491855 56492135 -10175870 - MER7A DNA MER2_type 0 346 63 183 156 0 0 chr20 56492135 56492167 -10175838 + (TATATG)n Simple_repeat Simple_repeat 4 35 0 687 301 48 13 chr20 56492229 56492458 -10175547 + MIR SINE MIR 13 249 -13 492 264 0 0 chr20 56493314 56493420 -10174585 + MER20 DNA MER1_type 90 195 -24 213 358 37 0 chr20 56493618 56493699 -10174306 + L2 LINE L2 3187 3270 -2 379 271 107 65 chr20 56494000 56494247 -10173758 + HAL1b LINE L1 611 846 -502 2662 17 0 0 chr20 56494247 56494542 -10173463 - AluYb8 SINE Alu -2 316 22 379 271 107 65 chr20 56494542 56495002 -10173003 + HAL1b LINE L1 846 1348 0 804 167 15 0 chr20 56495042 56495174 -10172831 - MLT2B2 LTR ERVL -381 134 1 1693 206 34 81 chr20 56496332 56496826 -10171179 + MLT1D LTR MaLR 35 505 0 248 349 9 9 chr20 56497154 56497263 -10170742 + MER5A DNA MER1_type 37 145 -44 275 372 55 30 chr20 56497564 56497728 -10170277 + L2 LINE L2 3104 3271 -1 251 260 10 60 chr20 56497927 56498027 -10169978 + L2 LINE L2 2514 2608 -706 * 638 310 174 25 chr20 56498021 56498389 -10169616 + L2 LINE L2 2884 3306 -7 2464 64 0 0 chr20 56498805 56499100 -10168905 + AluY SINE Alu 4 298 -13 368 236 28 0 chr20 56500086 56500158 -10167847 - MER81 DNA DNA 0 114 41 187 300 83 0 chr20 56501210 56501270 -10166735 - L2 LINE L2 -71 3201 3137 434 269 25 17 chr20 56501801 56501920 -10166085 - MIR SINE MIR -113 149 30 220 309 158 18 chr20 56503308 56503473 -10164532 - MIR SINE MIR -36 226 39 309 279 37 15 chr20 56503528 56503664 -10164341 - L1MC/D LINE L1 -1971 5837 5699 202 194 0 0 chr20 56503876 56503912 -10164093 + L2 LINE L2 3237 3272 0 264 269 128 0 chr20 56504006 56504084 -10163921 - MIR SINE MIR -112 150 63 415 297 18 53 chr20 56504232 56504469 -10163536 - MIR SINE MIR 0 262 30 544 314 92 59 chr20 56505296 56505917 -10162088 - L2 LINE L2 -190 3082 2420 3996 255 33 47 chr20 56506444 56508271 -10159734 + L1MC4a LINE L1 4733 5316 -830 514 310 48 48 chr20 56508319 56508590 -10159415 + L2 LINE L2 3038 3308 -5 216 216 0 0 chr20 56508648 56508699 -10159306 + (TATATG)n Simple_repeat Simple_repeat 2 52 0 295 360 34 27 chr20 56508780 56508927 -10159078 - MER5A DNA MER1_type -5 184 37 25 0 0 0 chr20 56509692 56509717 -10158288 + AT_rich Low_complexity Low_complexity 1 25 0 1074 195 62 74 chr20 56509773 56510163 -10157842 - MER58D DNA MER1_type 0 386 2 1252 185 38 65 chr20 56510225 56510544 -10157461 + AluJb SINE Alu 1 311 0 235 45 68 0 chr20 56511741 56511785 -10156220 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 2439 87 0 6 chr20 56511791 56512103 -10155902 - AluY SINE Alu 0 311 2 413 338 7 7 chr20 56512213 56512355 -10155650 + L2 LINE L2 3170 3311 -2 451 274 89 36 chr20 56512732 56512900 -10155105 + MIR SINE MIR 20 196 -66 233 106 30 30 chr20 56512923 56512989 -10155016 + (TA)n Simple_repeat Simple_repeat 2 67 0 311 133 0 17 chr20 56513033 56513093 -10154912 + (CAT)n Simple_repeat Simple_repeat 2 60 0 235 297 55 28 chr20 56513968 56514113 -10153892 - MLT1J2 LTR MaLR -38 412 264 227 175 0 0 chr20 56514641 56514681 -10153324 + L2 LINE L2 3273 3312 -1 659 183 42 0 chr20 56515897 56516017 -10151988 - FLAM_C SINE Alu -5 138 14 1032 192 136 14 chr20 56516151 56516438 -10151567 + MER5C DNA MER1_type 3 324 0 475 241 38 93 chr20 56516737 56516973 -10151032 - L2 LINE L2 0 3313 3091 2240 59 17 10 chr20 56517002 56517290 -10150715 - AluY SINE Alu -21 290 1 194 205 0 0 chr20 56517292 56517331 -10150674 - L2 LINE L2 -768 2546 2508 207 100 0 0 chr20 56517331 56517361 -10150644 + (T)n Simple_repeat Simple_repeat 1 30 0 2279 256 59 30 chr20 56517377 56518145 -10149860 - L2 LINE L2 -819 2495 1706 394 233 93 53 chr20 56518747 56518897 -10149108 - MLT1J2 LTR MaLR -46 404 249 383 242 42 0 chr20 56518924 56519019 -10148986 - MLT1J2 LTR MaLR -287 163 65 2487 80 0 0 chr20 56519081 56519382 -10148623 - AluSx SINE Alu -11 301 1 334 189 23 45 chr20 56520005 56520137 -10147868 + (TA)n Simple_repeat Simple_repeat 1 129 0 962 178 0 17 chr20 56520509 56520689 -10147316 - L1M2 LINE L1 -583 5729 5553 232 196 54 0 chr20 56520680 56520736 -10147269 + L1MA9 LINE L1 6254 6312 0 * 696 291 131 5 chr20 56521030 56521412 -10146593 + LTR33 LTR ERVL 9 438 -83 238 241 130 9 chr20 56522216 56522324 -10145681 - L2 LINE L2 -846 2468 2348 209 357 0 12 chr20 56522548 56522632 -10145373 + MIR SINE MIR 180 262 0 543 259 85 42 chr20 56522925 56523114 -10144891 + MIR SINE MIR 11 207 -55 25 31 0 0 chr20 56523489 56523521 -10144484 + AT_rich Low_complexity Low_complexity 1 32 0 1032 254 131 0 chr20 56524931 56525222 -10142783 - LTR16A LTR ERVL -9 441 113 812 252 97 29 chr20 56525222 56525460 -10142545 - HERV16 LTR ERVL -3055 1941 1688 287 245 20 68 chr20 56526161 56526308 -10141697 - L1M4 LINE L1 -6318 224 85 324 0 0 0 chr20 56527881 56527917 -10140088 + (TG)n Simple_repeat Simple_repeat 2 37 0 211 339 68 25 chr20 56529232 56529350 -10138655 - MER5B DNA MER1_type -29 149 27 273 331 125 43 chr20 56529546 56529606 -10138399 - L2 LINE L2 0 3313 3259 2594 115 5 3 chr20 56529606 56529980 -10138025 + THE1C LTR MaLR 1 375 0 273 331 125 43 chr20 56529980 56530200 -10137805 - L2 LINE L2 -54 3259 3010 23 92 0 0 chr20 56530517 56530582 -10137423 + AT_rich Low_complexity Low_complexity 1 65 0 557 313 43 21 chr20 56530612 56530941 -10137064 - L1ME4a LINE L1 -293 5828 5493 33 43 0 0 chr20 56531118 56531165 -10136840 + AT_rich Low_complexity Low_complexity 1 47 0 215 286 71 0 chr20 56531364 56531420 -10136585 - MIR SINE MIR -170 92 33 261 0 0 0 chr20 56531428 56531457 -10136548 + (TA)n Simple_repeat Simple_repeat 1 29 0 1289 7 0 0 chr20 56531460 56531603 -10136402 - AluY SINE Alu 0 311 169 781 206 94 6 chr20 56531677 56531837 -10136168 + MER58B DNA MER1_type 168 341 0 456 324 100 34 chr20 56532467 56532980 -10135025 + L3 LINE CR1 803 1422 -155 969 185 0 0 chr20 56533080 56533242 -10134763 - AluSg/x SINE Alu -13 297 136 261 322 0 23 chr20 56533441 56533528 -10134477 + L3 LINE CR1 1422 1506 -71 222 383 11 0 chr20 56533624 56533718 -10134287 - L2 LINE L2 -362 2952 2858 225 282 35 12 chr20 56533996 56534081 -10133924 + MLT1I LTR MaLR 319 405 -4 201 39 0 0 chr20 56534716 56534742 -10133263 + (T)n Simple_repeat Simple_repeat 1 26 0 591 292 86 34 chr20 56534848 56535081 -10132924 - MIR SINE MIR -8 254 10 291 310 117 7 chr20 56535256 56535401 -10132604 + MIR SINE MIR 98 258 -4 489 370 76 9 chr20 56535684 56535895 -10132110 + MIR SINE MIR 3 227 -35 197 146 21 0 chr20 56536281 56536329 -10131676 + (CATA)n Simple_repeat Simple_repeat 2 50 0 339 256 8 16 chr20 56536338 56536467 -10131538 + (TA)n Simple_repeat Simple_repeat 1 128 0 22 0 0 0 chr20 56537189 56537211 -10130794 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr20 56537751 56537781 -10130224 + AT_rich Low_complexity Low_complexity 1 30 0 2841 116 15 2 chr20 56539051 56539448 -10128557 + MER1A DNA MER1_type 1 402 -127 311 219 38 19 chr20 56539449 56539554 -10128451 + (TTATA)n Simple_repeat Simple_repeat 4 110 0 192 179 30 60 chr20 56539572 56539706 -10128299 + (TTATA)n Simple_repeat Simple_repeat 2 131 0 229 287 12 30 chr20 56539735 56539845 -10128160 + (TTATA)n Simple_repeat Simple_repeat 1 109 -55 189 94 0 0 chr20 56539845 56539877 -10128128 + (TATAA)n Simple_repeat Simple_repeat 1 32 0 229 287 12 30 chr20 56539877 56539933 -10128072 + (TTATA)n Simple_repeat Simple_repeat 109 164 0 1067 112 0 7 chr20 56539937 56540089 -10127916 + MER1A DNA MER1_type 379 529 0 2702 228 42 51 chr20 56540522 56540662 -10127343 - L1ME1 LINE L1 -66 6100 5960 1910 84 0 15 chr20 56540662 56540944 -10127061 - AluY SINE Alu 0 305 28 2702 228 42 51 chr20 56540944 56542144 -10125861 - L1ME1 LINE L1 -206 5960 4767 5874 171 87 136 chr20 56542313 56543543 -10124462 + L1MC3 LINE L1 5884 7173 -612 356 268 0 0 chr20 56543543 56543625 -10124380 + MLT1H1 LTR MaLR 44 125 -442 5874 171 87 136 chr20 56543625 56543740 -10124265 + L1MC3 LINE L1 7173 7292 -493 2159 113 0 3 chr20 56543740 56544031 -10123974 + AluSx SINE Alu 1 290 -22 5874 171 87 136 chr20 56544031 56544601 -10123404 + L1MC3 LINE L1 7292 7783 -2 543 256 97 101 chr20 56544864 56545318 -10122687 + MLT1H1 LTR MaLR 104 555 0 2096 132 19 43 chr20 56545762 56546132 -10121873 + THE1C LTR MaLR 15 375 0 275 306 97 36 chr20 56546574 56546770 -10121235 + MIR SINE MIR 47 254 -8 581 273 32 0 chr20 56546969 56547123 -10120882 + MIR SINE MIR 85 243 -19 1631 132 45 15 chr20 56547342 56547608 -10120397 - AluSg SINE Alu -36 274 1 302 272 124 87 chr20 56548480 56548745 -10119260 - L2 LINE L2 -88 3225 2951 258 263 53 0 chr20 56548828 56548904 -10119101 - L2 LINE L2 -519 2795 2716 183 325 135 8 chr20 56548950 56549076 -10118929 - MIR SINE MIR -64 198 57 265 311 0 66 chr20 56549976 56550082 -10117923 - L2 LINE L2 0 3272 3174 275 256 13 13 chr20 56550331 56550409 -10117596 + MLT1J LTR MaLR 100 177 -334 460 205 25 140 chr20 56551007 56551207 -10116798 - MER5B DNA MER1_type -1 177 1 280 337 45 40 chr20 56551275 56551425 -10116580 + MIR3 SINE MIR 6 161 -47 193 330 34 11 chr20 56552028 56552116 -10115889 - MIR3 SINE MIR -2 206 117 1148 179 84 49 chr20 56552221 56552345 -10115660 + MER33 DNA MER1_type 1 119 -2466 1986 141 6 28 chr20 56552345 56552664 -10115341 + AluSx SINE Alu 1 312 0 1148 179 84 49 chr20 56552664 56552821 -10115184 + MER33 DNA MER1_type 119 296 -2289 2184 128 3 0 chr20 56552821 56553133 -10114872 - AluSq SINE Alu 0 313 1 1148 179 84 49 chr20 56553133 56553158 -10114847 + MER33 DNA MER1_type 296 319 -5 1288 175 4 72 chr20 56553847 56554110 -10113895 - AluJo SINE Alu -30 282 38 21 71 0 0 chr20 56554946 56554988 -10113017 + AT_rich Low_complexity Low_complexity 1 42 0 785 259 85 9 chr20 56555586 56555914 -10112091 - L1MC4 LINE L1 -2 8040 7688 246 337 0 0 chr20 56557394 56557477 -10110528 + (TG)n Simple_repeat Simple_repeat 2 84 0 2414 100 50 8 chr20 56557561 56557921 -10110084 - THE1C LTR MaLR 0 375 1 2131 137 114 5 chr20 56557943 56558329 -10109676 + MSTA LTR MaLR 1 428 0 21 0 0 0 chr20 56558466 56558487 -10109518 + AT_rich Low_complexity Low_complexity 1 21 0 923 38 0 0 chr20 56559424 56559530 -10108475 + AluY SINE Alu 182 287 -24 28 0 0 0 chr20 56559530 56559558 -10108447 + AT_rich Low_complexity Low_complexity 1 28 0 2324 222 96 58 chr20 56560918 56561388 -10106617 - L1ME1 LINE L1 -1 6234 5783 333 120 0 20 chr20 56561388 56561438 -10106567 - MSTB LTR MaLR -59 367 319 2324 222 96 58 chr20 56561438 56561940 -10106065 - L1ME1 LINE L1 -452 5783 5192 232 234 47 16 chr20 56562056 56562120 -10105885 - L1ME1 LINE L1 -6293 103 38 230 296 98 23 chr20 56563291 56563423 -10104582 - L2 LINE L2 -489 2825 2684 230 345 29 22 chr20 56563429 56563568 -10104437 + MIR SINE MIR 119 258 -4 255 321 19 9 chr20 56563580 56563686 -10104319 + L2 LINE L2 3158 3264 -49 370 316 29 29 chr20 56563815 56563954 -10104051 + L2 LINE L2 3134 3272 0 306 333 73 0 chr20 56564032 56564155 -10103850 + L2 LINE L2 3180 3311 -2 253 314 12 0 chr20 56564647 56564733 -10103272 + GA-rich Low_complexity Low_complexity 1 87 0 2022 141 3 3 chr20 56564869 56565167 -10102838 + AluSx SINE Alu 1 298 -14 242 213 0 0 chr20 56565818 56565865 -10102140 + (CATA)n Simple_repeat Simple_repeat 1 47 0 707 272 63 5 chr20 56565895 56566101 -10101904 + MER20 DNA MER1_type 1 218 -1 2242 98 0 0 chr20 56567347 56567632 -10100373 - AluSc SINE Alu -24 285 1 4119 166 28 67 chr20 56567774 56568317 -10099688 - L1MA10 LINE L1 -2 6332 5838 2518 7 0 0 chr20 56568317 56568590 -10099415 - AluYa5 SINE Alu 0 311 39 4119 166 28 67 chr20 56568590 56568972 -10099033 - L1MA10 LINE L1 -496 5838 5443 3711 208 71 6 chr20 56568979 56569954 -10098051 + L1 LINE L1 3611 4648 -1498 29820 114 14 36 chr20 56569967 56574244 -10093761 - L1PA7 LINE L1 -5 6464 2244 7769 33 0 8 chr20 56574244 56575092 -10092913 - L1PA4 LINE L1 0 6155 5302 2924 9 0 0 chr20 56575092 56575409 -10092596 - AluYb8 SINE Alu -1 317 1 7769 33 0 8 chr20 56575409 56576282 -10091723 - L1PA4 LINE L1 -853 5302 4437 29820 114 14 36 chr20 56576282 56578471 -10089534 - L1PA7 LINE L1 -4225 2244 10 4144 86 31 4 chr20 56578444 56579183 -10088822 - L1P3 LINE L1 -623 5846 5091 * 2043 197 84 41 chr20 56579185 56579899 -10088106 + L1 LINE L1 4673 5424 -743 187 30 30 30 chr20 56580046 56580079 -10087926 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 824 227 70 0 chr20 56580721 56580893 -10087112 - MER5A DNA MER1_type -3 186 3 510 242 211 0 chr20 56581304 56581465 -10086540 - MER58A DNA MER1_type -3 221 27 329 281 12 0 chr20 56581560 56581642 -10086363 - MER5B DNA MER1_type -37 141 59 362 299 10 0 chr20 56582065 56582162 -10085843 - MER5A DNA MER1_type -84 105 8 1108 293 81 43 chr20 56582672 56583231 -10084774 - MLT1E LTR MaLR -66 527 1 547 243 100 54 chr20 56583619 56583878 -10084127 + L1ME LINE L1 3 273 -5797 1832 158 3 0 chr20 56583878 56584162 -10083843 + AluSx SINE Alu 1 285 -27 746 241 0 18 chr20 56584236 56584406 -10083599 + AluJo SINE Alu 112 278 -34 23 33 0 0 chr20 56584410 56584440 -10083565 + AT_rich Low_complexity Low_complexity 1 30 0 498 100 109 45 chr20 56584788 56584898 -10083107 + LTR40a LTR ERVL 380 496 -23 23 33 0 0 chr20 56585030 56585060 -10082945 + AT_rich Low_complexity Low_complexity 1 30 0 390 134 0 0 chr20 56585410 56585477 -10082528 + (TC)n Simple_repeat Simple_repeat 1 67 0 22 35 0 0 chr20 56585520 56585549 -10082456 + AT_rich Low_complexity Low_complexity 1 29 0 911 158 21 117 chr20 56586263 56586503 -10081502 + MER20 DNA MER1_type 1 217 -2 219 238 0 0 chr20 56587136 56587178 -10080827 + MIR SINE MIR 65 106 -102 203 264 11 103 chr20 56587501 56587530 -10080475 - L2 LINE L2 -1 3271 3241 2378 75 0 0 chr20 56587530 56587824 -10080181 - AluY SINE Alu -17 294 1 203 264 11 103 chr20 56587824 56587881 -10080124 - L2 LINE L2 -31 3241 3193 291 326 145 44 chr20 56587901 56588128 -10079877 - L2 LINE L2 -3 3269 3020 188 350 117 7 chr20 56588278 56588415 -10079590 - MIR3 SINE MIR -11 197 46 237 233 12 81 chr20 56589270 56589356 -10078649 + MLT1K LTR MaLR 408 487 -101 295 169 34 0 chr20 56589373 56589432 -10078573 - L1M4 LINE L1 -1796 4350 4290 278 265 68 17 chr20 56589435 56589552 -10078453 - L1MCc LINE L1 -5069 1354 1232 850 320 128 50 chr20 56589636 56590299 -10077706 - L2 LINE L2 -376 2938 2224 23 0 0 0 chr20 56591115 56591138 -10076867 + AT_rich Low_complexity Low_complexity 1 23 0 934 216 9 65 chr20 56591303 56591535 -10076470 + MER20 DNA MER1_type 1 219 0 23 0 0 0 chr20 56591943 56591966 -10076039 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr20 56592068 56592096 -10075909 + AT_rich Low_complexity Low_complexity 1 28 0 417 270 106 37 chr20 56592350 56592539 -10075466 - MIR SINE MIR -1 261 60 396 252 95 41 chr20 56593164 56593311 -10074694 - L3 LINE CR1 -75 1502 1348 266 298 105 9 chr20 56593388 56593502 -10074503 + MLT1G1 LTR MaLR 20 144 -451 683 302 127 23 chr20 56593583 56594176 -10073829 - L2 LINE L2 -100 3213 2543 599 294 169 34 chr20 56594448 56594958 -10073047 - L1ME4a LINE L1 -4 6117 5526 2350 58 0 17 chr20 56594958 56595250 -10072755 + AluSc SINE Alu 1 287 -22 599 294 169 34 chr20 56595250 56595291 -10072714 - L1ME4a LINE L1 -595 5526 5492 1508 178 8 4 chr20 56595385 56595643 -10072362 - MER2 DNA MER2_type -85 260 2 360 260 60 0 chr20 56595861 56595961 -10072044 - MER113 DNA MER1_type? -27 494 389 21 36 0 0 chr20 56596022 56596050 -10071955 + AT_rich Low_complexity Low_complexity 1 28 0 313 239 0 0 chr20 56596082 56596149 -10071856 - MIR SINE MIR -26 236 170 495 285 172 0 chr20 56596384 56596535 -10071470 - MER5A DNA MER1_type -2 187 11 9941 204 42 16 chr20 56596788 56600342 -10067663 - L1PA16 LINE L1 -3 6163 2525 198 103 0 0 chr20 56600377 56600406 -10067599 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 874 217 0 0 chr20 56600409 56600552 -10067453 - FRAM SINE Alu -33 143 1 396 0 0 0 chr20 56600554 56600598 -10067407 + (TG)n Simple_repeat Simple_repeat 2 45 0 321 182 61 0 chr20 56600609 56600675 -10067330 - L1MCa LINE L1 -4362 2064 1995 215 93 23 0 chr20 56600676 56600719 -10067286 + (TA)n Simple_repeat Simple_repeat 2 45 0 462 188 0 0 chr20 56600720 56600800 -10067205 - FLAM SINE Alu -18 125 46 1309 247 57 8 chr20 56600804 56601193 -10066812 - L1PA16 LINE L1 -3651 2495 2088 3088 183 42 25 chr20 56601906 56602593 -10065412 - L1MB2 LINE L1 -8 6163 5465 824 160 3 21 chr20 56602596 56602764 -10065241 + L1MB3 LINE L1 5781 5945 -211 365 136 0 0 chr20 56602787 56602846 -10065159 + L1MB4 LINE L1 5873 5931 -249 2631 154 29 22 chr20 56602993 56603447 -10064558 - LTR32 LTR ERVL 0 471 15 351 0 0 0 chr20 56603841 56603880 -10064125 + (CA)n Simple_repeat Simple_repeat 2 40 0 1466 6 0 0 chr20 56604483 56604647 -10063358 - L1P1 LINE L1 -382 5773 5610 * 3136 96 29 25 chr20 56604536 56605038 -10062967 + L1PA3 LINE L1 5657 6160 0 335 326 34 40 chr20 56606397 56606572 -10061433 + MIR SINE MIR 47 220 -42 186 305 92 105 chr20 56607484 56607799 -10060206 - L2 LINE L2 -4 3268 2958 194 326 11 33 chr20 56608119 56608211 -10059794 + L2 LINE L2 3224 3313 0 688 268 119 37 chr20 56608314 56608583 -10059422 + MLT1J1 LTR MaLR 48 338 -108 23 0 0 0 chr20 56608788 56608811 -10059194 + AT_rich Low_complexity Low_complexity 1 23 0 439 266 138 48 chr20 56608988 56609300 -10058705 - LTR50 LTR ERVL -7 788 449 2289 99 0 19 chr20 56609337 56609651 -10058354 - AluSg SINE Alu -1 309 2 25 0 0 0 chr20 56609757 56609782 -10058223 + AT_rich Low_complexity Low_complexity 1 25 0 340 269 40 141 chr20 56609800 56610049 -10057956 - MIR SINE MIR -31 231 8 2074 138 3 3 chr20 56610213 56610525 -10057480 - AluSx SINE Alu 0 312 1 422 305 70 37 chr20 56611021 56611208 -10056797 - MIR SINE MIR -22 240 48 630 296 210 15 chr20 56611340 56611973 -10056032 - L2 LINE L2 0 3313 2546 423 230 11 11 chr20 56612306 56612581 -10055424 + (TA)n Simple_repeat Simple_repeat 1 275 0 372 332 32 33 chr20 56613266 56613485 -10054520 - MIR SINE MIR -43 219 3 343 246 95 134 chr20 56613521 56613753 -10054252 - MLT1K LTR MaLR -12 576 354 1992 150 32 68 chr20 56613807 56614247 -10053758 - MSTB1 LTR MaLR 0 432 9 359 293 13 15 chr20 56614268 56614424 -10053581 - MLT1K LTR MaLR -356 232 42 650 249 112 29 chr20 56614710 56614915 -10053090 + MIR SINE MIR 31 252 -10 207 328 172 0 chr20 56616066 56616182 -10051823 + MIR SINE MIR 101 236 -26 386 368 0 12 chr20 56616956 56617119 -10050886 + MER5A DNA MER1_type 1 161 -28 2235 84 0 0 chr20 56617330 56617628 -10050377 + L1PA7 LINE L1 5852 6149 -5 201 129 0 0 chr20 56617983 56618014 -10049991 + (CA)n Simple_repeat Simple_repeat 2 32 0 512 60 33 71 chr20 56618044 56618228 -10049777 + (TA)n Simple_repeat Simple_repeat 1 177 0 264 334 69 57 chr20 56618994 56619078 -10048927 + L2 LINE L2 2798 2879 -393 853 271 42 0 chr20 56619078 56619292 -10048713 + MER58A DNA MER1_type 2 224 0 264 334 69 57 chr20 56619292 56619591 -10048414 + L2 LINE L2 2879 3196 -76 425 300 87 13 chr20 56621079 56621229 -10046776 + L2 LINE L2 3112 3272 0 394 276 100 8 chr20 56621291 56621446 -10046559 + MIR SINE MIR 34 201 -61 360 158 42 43 chr20 56621447 56621561 -10046444 - MLT1F LTR MaLR 0 542 433 284 282 91 77 chr20 56621588 56621797 -10046208 - MLT1F LTR MaLR -229 320 109 185 293 0 107 chr20 56621822 56621897 -10046108 + L2 LINE L2 3170 3236 -36 2444 76 0 0 chr20 56621906 56622209 -10045796 + AluY SINE Alu 1 303 -8 232 28 131 28 chr20 56622287 56622394 -10045611 + (CATAT)n Simple_repeat Simple_repeat 3 120 0 242 250 17 75 chr20 56622543 56622663 -10045342 - LTR16C LTR ERVL -2 489 377 3036 156 184 32 chr20 56625566 56626283 -10041722 - LTR1B LTR ERV1 0 826 1 679 249 81 15 chr20 56626406 56626603 -10041402 - MER20 DNA MER1_type -9 210 1 390 233 33 17 chr20 56627089 56627209 -10040796 - MER33 DNA MER1_type -170 154 33 395 278 130 25 chr20 56627314 56627476 -10040529 - MIR SINE MIR 0 262 84 289 328 25 5 chr20 56628265 56628469 -10039536 + MER113 DNA MER1_type? 1 208 -313 259 301 135 37 chr20 56628506 56628669 -10039336 - LTR33 LTR ERVL -1 520 342 292 252 152 20 chr20 56628938 56629089 -10038916 + MER113 DNA MER1_type? 337 507 -14 575 337 35 41 chr20 56629268 56629754 -10038251 + L1M4 LINE L1 2671 3153 -2993 36 53 0 0 chr20 56629863 56629920 -10038085 + AT_rich Low_complexity Low_complexity 1 57 0 2562 65 3 0 chr20 56629930 56630240 -10037765 + AluY SINE Alu 1 311 0 261 319 68 39 chr20 56630321 56630731 -10037274 + L1M4 LINE L1 3358 3779 -2367 308 293 43 21 chr20 56630736 56630876 -10037129 + L1M4 LINE L1 3805 3947 -2199 210 253 222 0 chr20 56631164 56631263 -10036742 + MIR SINE MIR 132 252 -10 329 374 67 0 chr20 56633315 56633494 -10034511 - MLT1K LTR MaLR -395 193 3 316 267 67 60 chr20 56635167 56635317 -10032688 + MER5B DNA MER1_type 1 151 -27 228 320 31 10 chr20 56635573 56635670 -10032335 + MER117 DNA MER1_type 98 196 -1 331 233 0 14 chr20 56635835 56635908 -10032097 + Charlie1 DNA MER1_type 1486 1557 -1204 265 239 0 75 chr20 56635917 56635984 -10032021 - MER2 DNA MER2_type 0 345 284 * 660 274 0 0 chr20 56635961 56636114 -10031891 - MER8 DNA MER2_type -60 179 27 3721 187 49 55 chr20 56636125 56636432 -10031573 + MER21B LTR ERV1 1 308 -555 282 29 0 0 chr20 56636432 56636467 -10031538 + (CA)n Simple_repeat Simple_repeat 2 36 0 3721 187 49 55 chr20 56636467 56637018 -10030987 + MER21B LTR ERV1 308 854 -9 2467 239 68 17 chr20 56637205 56637954 -10030051 + Charlie1 DNA MER1_type 1563 2349 -412 191 306 41 10 chr20 56638550 56638648 -10029357 + L2 LINE L2 2636 2736 -578 372 290 9 28 chr20 56638653 56638760 -10029245 + L2 LINE L2 2895 2999 -314 1067 276 49 70 chr20 56638921 56639352 -10028653 + MLT1H LTR MaLR 1 422 -127 232 222 0 0 chr20 56639468 56639513 -10028492 + L2 LINE L2 3193 3237 -35 237 273 0 39 chr20 56640492 56640569 -10027436 + CT-rich Low_complexity Low_complexity 3 76 0 360 230 0 22 chr20 56640585 56640724 -10027281 + CT-rich Low_complexity Low_complexity 3 138 0 274 317 9 16 chr20 56641708 56641858 -10026147 + L1ME LINE L1 5677 5824 -297 235 319 11 11 chr20 56641969 56642060 -10025945 - MIR SINE MIR -145 117 27 1847 144 18 0 chr20 56642428 56642731 -10025274 + AluSx SINE Alu 1 308 0 884 263 12 44 chr20 56643815 56644066 -10023939 + MIR SINE MIR 19 261 -1 192 393 80 0 chr20 56644352 56644464 -10023541 + MIR SINE MIR 36 156 -106 23 54 0 0 chr20 56644777 56644814 -10023191 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr20 56645863 56645885 -10022120 + AT_rich Low_complexity Low_complexity 1 22 0 226 261 14 14 chr20 56646735 56646804 -10021201 + CT-rich Low_complexity Low_complexity 3 71 0 430 344 132 43 chr20 56646804 56647303 -10020702 - L2 LINE L2 -5 3267 2735 683 311 107 17 chr20 56648039 56648564 -10019441 + L1ME4a LINE L1 5539 6110 -11 1687 168 11 49 chr20 56649144 56649513 -10018492 + L1MA8 LINE L1 5903 6257 -34 29 28 0 0 chr20 56649526 56649562 -10018443 + AT_rich Low_complexity Low_complexity 1 36 0 201 267 198 20 chr20 56650729 56650830 -10017175 + MIR SINE MIR 134 252 -10 638 281 79 25 chr20 56651131 56651334 -10016671 - MIR SINE MIR -29 233 20 272 309 99 25 chr20 56652177 56652339 -10015666 - MIR SINE MIR -2 260 87 1684 198 103 71 chr20 56652508 56653110 -10014895 + MER74B LTR ERVL 1 621 -1 645 231 0 0 chr20 56653217 56653347 -10014658 + FLAM_A SINE Alu 1 130 -3 432 0 0 0 chr20 56653392 56653440 -10014565 + (TG)n Simple_repeat Simple_repeat 2 49 0 1099 188 26 26 chr20 56653536 56653802 -10014203 - L1MD3 LINE L1 0 7995 7730 232 233 0 50 chr20 56654390 56654450 -10013555 + HAL1 LINE L1 1308 1364 -1143 2074 119 7 0 chr20 56654697 56655001 -10013004 + AluSc SINE Alu 1 306 0 2379 100 0 0 chr20 56655377 56655676 -10012329 + AluSq SINE Alu 1 299 -14 282 210 16 0 chr20 56655859 56655921 -10012084 + MER96 DNA MER1_type? 113 175 0 497 217 76 32 chr20 56655992 56656149 -10011856 + L1MC4a LINE L1 5709 5872 -1936 3510 128 35 37 chr20 56656195 56656349 -10011656 + MER7C DNA MER2_type 5 158 -2870 1902 127 18 7 chr20 56656349 56656632 -10011373 + AluSx SINE Alu 1 286 -26 3510 128 35 37 chr20 56656632 56657076 -10010929 + MER7C DNA MER2_type 158 602 0 428 306 102 57 chr20 56657187 56657570 -10010435 - MLT1J LTR MaLR -13 498 99 2076 107 0 4 chr20 56657723 56658004 -10010001 + AluSp SINE Alu 22 301 -12 301 269 17 34 chr20 56658471 56658590 -10009415 + MER103 DNA DNA 3 119 -47 309 294 14 0 chr20 56658922 56659021 -10008984 + MIR SINE MIR 52 152 -56 2451 90 0 0 chr20 56659057 56659368 -10008637 + AluY SINE Alu 1 311 0 199 268 71 0 chr20 56659464 56659520 -10008485 + MIR SINE MIR 103 162 -100 832 338 127 15 chr20 56660087 56660674 -10007331 + L2 LINE L2 2657 3313 0 530 266 7 0 chr20 56660687 56660826 -10007179 - L1M4 LINE L1 -2291 3855 3716 1399 258 82 23 chr20 56660826 56661420 -10006585 + L1ME1 LINE L1 5510 6156 -8 3406 72 0 0 chr20 56663878 56664320 -10003685 + L1PA13 LINE L1 5722 6163 0 234 0 0 0 chr20 56664394 56664420 -10003585 + (TG)n Simple_repeat Simple_repeat 1 26 0 441 321 6 24 chr20 56664479 56664992 -10003013 + C-rich Low_complexity Low_complexity 1 503 0 267 251 0 43 chr20 56665029 56665192 -10002813 + C-rich Low_complexity Low_complexity 4 159 0 2262 104 0 0 chr20 56665322 56665630 -10002375 - AluSx SINE Alu -4 308 1 269 288 93 39 chr20 56665651 56665856 -10002149 + L2 LINE L2 2967 3182 -131 227 159 0 0 chr20 56665877 56665921 -10002084 - LTR66 LTR ERVL -169 441 398 308 219 0 16 chr20 56665930 56665994 -10002011 - L1MCa LINE L1 -4358 2068 2006 200 147 29 29 chr20 56666009 56666077 -10001928 + (TA)n Simple_repeat Simple_repeat 1 68 0 323 208 0 99 chr20 56666089 56666190 -10001815 + L1MC4 LINE L1 6612 6702 -1340 312 268 8 0 chr20 56666290 56666417 -10001588 + (TA)n Simple_repeat Simple_repeat 1 128 0 1097 265 142 35 chr20 56717618 56718154 -9949851 + MLT1E LTR MaLR 1 593 0 360 0 0 0 chr20 56718166 56718206 -9949799 + (CA)n Simple_repeat Simple_repeat 2 41 0 681 120 7 106 chr20 56718403 56718545 -9949460 - FRAM SINE Alu 0 40 1 293 301 62 48 chr20 56719038 56719247 -9948758 + MIR SINE MIR 20 231 -31 2194 126 3 0 chr20 56720502 56720803 -9947202 + AluSx SINE Alu 1 302 -10 207 182 45 0 chr20 56721472 56721516 -9946489 + L2 LINE L2 3268 3313 0 5668 156 22 5 chr20 56723029 56724307 -9943698 - L1P4 LINE L1 -608 5555 4252 1594 201 10 3 chr20 56724308 56724696 -9943309 + L1P LINE L1 2866 3256 -2890 2362 72 0 23 chr20 56724882 56725189 -9942816 + AluY SINE Alu 3 302 -9 1296 184 17 63 chr20 56725189 56725320 -9942685 + L1PB4 LINE L1 5823 5958 -198 1924 160 3 3 chr20 56725320 56725626 -9942379 + AluJb SINE Alu 1 306 -6 1296 184 17 63 chr20 56725626 56725841 -9942164 + L1PB4 LINE L1 5958 6153 -3 1025 138 0 0 chr20 56725950 56726095 -9941910 + AluSq/x SINE Alu 1 145 -167 398 357 112 5 chr20 56726201 56726397 -9941608 - MIR SINE MIR -45 217 1 300 290 72 43 chr20 56726397 56726535 -9941470 + MIR SINE MIR 65 206 -56 201 309 0 0 chr20 56726793 56726848 -9941157 + MIR SINE MIR 66 120 -142 436 307 73 13 chr20 56726986 56727136 -9940869 - MIR3 SINE MIR -13 195 37 498 251 167 23 chr20 56727344 56727559 -9940446 + LTR16C LTR ERVL 154 399 -92 199 369 41 26 chr20 56727617 56727812 -9940193 + L2 LINE L2 1051 1248 -2066 228 249 68 140 chr20 56727881 56728102 -9939903 - L2 LINE L2 -65 3248 3044 494 348 208 20 chr20 56728169 56728911 -9939094 + L2 LINE L2 1983 2863 -451 1733 266 25 55 chr20 56729204 56729909 -9938096 + L1M4 LINE L1 3325 4001 -2145 2242 127 3 0 chr20 56729909 56730216 -9937789 + AluSc SINE Alu 1 308 -1 1733 266 25 55 chr20 56730216 56730379 -9937626 + L1M4 LINE L1 4001 4167 -1979 3972 145 21 11 chr20 56730480 56731182 -9936823 + MSTA-int LTR MaLR 942 1650 -1 2358 143 27 7 chr20 56731185 56731592 -9936413 + MSTA LTR MaLR 3 417 -11 380 276 10 0 chr20 56731595 56731693 -9936312 + L1M2c LINE L1 1375 1473 -5316 1778 168 0 50 chr20 56732126 56732450 -9935555 + AluSx SINE Alu 1 309 0 4625 18 0 0 chr20 56732845 56733407 -9934598 + L1P LINE L1 4477 5038 -1108 602 261 90 36 chr20 56733510 56733620 -9934385 + L1MEc LINE L1 862 965 -5431 865 226 103 0 chr20 56733620 56733815 -9934190 - MER58C DNA MER1_type 0 215 1 602 261 90 36 chr20 56733815 56734148 -9933857 + L1MEc LINE L1 965 1329 -5067 301 240 70 35 chr20 56734166 56734337 -9933668 + L1MEc LINE L1 1408 1584 -4812 196 269 6 6 chr20 56734466 56734626 -9933379 + (TTA)n Simple_repeat Simple_repeat 2 161 0 188 274 89 52 chr20 56735200 56735335 -9932670 - L2 LINE L2 -52 3220 3081 240 281 206 31 chr20 56735648 56735733 -9932272 - MIR SINE MIR -1 261 192 893 183 25 35 chr20 56735733 56735935 -9932070 - MER105 DNA DNA 0 204 5 240 281 206 31 chr20 56735935 56736009 -9931996 - MIR SINE MIR -70 192 74 1956 100 4 0 chr20 56736129 56736379 -9931626 + AluSx SINE Alu 34 284 -28 9051 99 5 6 chr20 56737023 56738430 -9929575 - L1P LINE L1 -2898 3248 1843 6728 64 6 32 chr20 56738423 56739290 -9928715 - L1PA4 LINE L1 0 6155 5310 * 1276 216 0 3 chr20 56739290 56739609 -9928396 - AluYb8 SINE Alu 0 318 1 6728 64 6 32 chr20 56739609 56739795 -9928210 - L1PA4 LINE L1 -845 5310 5121 2043 9 0 0 chr20 56739915 56740139 -9927866 - AluYa5 SINE Alu -49 262 39 1832 173 27 21 chr20 56740146 56740521 -9927484 - L1M3 LINE L1 -515 5819 5443 3475 204 72 6 chr20 56740539 56741503 -9926502 + L1 LINE L1 3622 4648 -1498 13815 100 13 5 chr20 56741523 56744348 -9923657 - L1PA7 LINE L1 -13 6141 3296 318 267 118 0 chr20 56744451 56744686 -9923319 - L1M3 LINE L1 -748 5398 5240 318 226 48 12 chr20 56744688 56744772 -9923233 - L1M3 LINE L1 -938 5208 5122 189 0 0 0 chr20 56744870 56744891 -9923114 + (T)n Simple_repeat Simple_repeat 1 21 0 234 296 98 23 chr20 56746124 56746256 -9921749 - L2 LINE L2 -489 2825 2684 224 345 29 22 chr20 56746262 56746401 -9921604 + MIR SINE MIR 119 258 -4 257 321 19 9 chr20 56746413 56746519 -9921486 + L2 LINE L2 3158 3264 -49 386 309 29 29 chr20 56746648 56746787 -9921218 + L2 LINE L2 3134 3272 0 291 341 73 0 chr20 56746865 56746988 -9921017 + L2 LINE L2 3180 3311 -2 253 314 12 0 chr20 56747480 56747566 -9920439 + GA-rich Low_complexity Low_complexity 1 87 0 2055 138 3 3 chr20 56747702 56748000 -9920005 + AluSx SINE Alu 1 298 -14 242 213 0 0 chr20 56748651 56748698 -9919307 + (CATA)n Simple_repeat Simple_repeat 1 47 0 704 272 63 5 chr20 56748728 56748934 -9919071 + MER20 DNA MER1_type 1 218 -1 2254 98 0 0 chr20 56750180 56750465 -9917540 - AluSc SINE Alu -24 285 1 2948 174 23 77 chr20 56750607 56751149 -9916856 - L1MA10 LINE L1 -2 6332 5845 2038 88 0 4 chr20 56751149 56751423 -9916582 - AluYa5 SINE Alu 0 311 39 2948 174 23 77 chr20 56751423 56751669 -9916336 - L1MA10 LINE L1 -489 5845 5587 189 300 83 0 chr20 56752383 56752443 -9915562 - L2 LINE L2 -71 3201 3137 438 269 25 17 chr20 56752974 56753093 -9914912 - MIR SINE MIR -113 149 30 238 309 158 18 chr20 56754481 56754646 -9913359 - MIR SINE MIR -36 226 39 273 279 37 15 chr20 56754701 56754837 -9913168 - L1MC/D LINE L1 -1971 5837 5699 200 194 0 0 chr20 56755049 56755085 -9912920 + L2 LINE L2 3237 3272 0 264 269 128 0 chr20 56755179 56755257 -9912748 - MIR SINE MIR -112 150 63 415 297 18 53 chr20 56755405 56755642 -9912363 - MIR SINE MIR 0 262 30 570 313 93 59 chr20 56756469 56757090 -9910915 - L2 LINE L2 -190 3082 2420 492 308 56 40 chr20 56757613 56758110 -9909895 + L1MC4a LINE L1 4729 5233 -913 3644 237 29 47 chr20 56758154 56759445 -9908560 + L1MC4a LINE L1 5266 6533 -1275 511 310 48 48 chr20 56759493 56759764 -9908241 + L2 LINE L2 3038 3308 -5 216 216 0 0 chr20 56759822 56759873 -9908132 + (TATATG)n Simple_repeat Simple_repeat 2 52 0 292 360 34 27 chr20 56759954 56760101 -9907904 - MER5A DNA MER1_type -5 184 37 25 0 0 0 chr20 56760866 56760891 -9907114 + AT_rich Low_complexity Low_complexity 1 25 0 1028 197 62 74 chr20 56760947 56761337 -9906668 - MER58D DNA MER1_type 0 386 2 809 145 0 36 chr20 56761399 56761572 -9906433 + FLAM_C SINE Alu 1 168 0 31 0 0 0 chr20 56761998 56762029 -9905976 + AT_rich Low_complexity Low_complexity 1 31 0 378 74 0 0 chr20 56762253 56762307 -9905698 + (TCCA)n Simple_repeat Simple_repeat 4 57 0 1358 252 149 21 chr20 56763502 56764066 -9903939 + MLT2F LTR ERVL 28 663 0 232 156 22 22 chr20 56765348 56765393 -9902612 - MIR SINE MIR -60 148 104 201 74 0 0 chr20 56765507 56765534 -9902471 + (GAA)n Simple_repeat Simple_repeat 1 27 0 515 234 45 0 chr20 56766038 56766149 -9901856 + MIR SINE MIR 60 175 -87 190 349 30 45 chr20 56766117 56766249 -9901756 + MER5A DNA MER1_type 30 159 -30 * 333 149 27 54 chr20 56766328 56766402 -9901603 - MIR SINE MIR 0 262 191 831 258 90 16 chr20 56766913 56767157 -9900848 + MIR SINE MIR 1 262 0 327 331 48 21 chr20 56767207 56767352 -9900653 - MER5A DNA MER1_type -1 188 40 208 371 59 53 chr20 56767410 56767532 -9900473 - MER5A DNA MER1_type -1 188 63 10626 30 0 1 chr20 56767532 56769577 -9898428 - L1PA3 LINE L1 -1 6154 4112 208 371 59 53 chr20 56769577 56769624 -9898381 - MER5A DNA MER1_type -126 63 18 273 75 0 0 chr20 56770919 56770959 -9897046 + (TTCA)n Simple_repeat Simple_repeat 4 43 0 552 294 53 84 chr20 56771058 56771452 -9896553 - L2 LINE L2 -1 3312 2931 383 200 0 0 chr20 56771737 56771812 -9896193 - L1MC4 LINE L1 -5 8037 7963 * 943 237 77 82 chr20 56771808 56772404 -9895601 - L1MC4 LINE L1 -303 7739 7147 219 221 35 23 chr20 56772507 56772593 -9895412 + (TATAA)n Simple_repeat Simple_repeat 4 90 0 1067 112 0 7 chr20 56772596 56772748 -9895257 + Charlie3 DNA MER1_type 2552 2702 -8 2696 227 43 51 chr20 56773178 56773321 -9894684 - L1ME1 LINE L1 -62 6104 5961 1910 84 0 15 chr20 56773321 56773603 -9894402 - AluY SINE Alu 0 305 28 2696 227 43 51 chr20 56773603 56774803 -9893202 - L1ME1 LINE L1 -205 5961 4767 5837 171 88 137 chr20 56774972 56776202 -9891803 + L1MC3 LINE L1 5884 7173 -612 356 268 0 0 chr20 56776202 56776284 -9891721 + MLT1H1 LTR MaLR 44 125 -442 5837 171 88 137 chr20 56776284 56776399 -9891606 + L1MC3 LINE L1 7173 7292 -493 2159 113 0 3 chr20 56776399 56776690 -9891315 + AluSx SINE Alu 1 290 -22 5837 171 88 137 chr20 56776690 56777260 -9890745 + L1MC3 LINE L1 7292 7783 -2 539 256 97 101 chr20 56777523 56777977 -9890028 + MLT1H1 LTR MaLR 104 555 0 2096 132 19 43 chr20 56778421 56778791 -9889214 + THE1C LTR MaLR 15 375 0 275 306 97 36 chr20 56779229 56779425 -9888580 + MIR SINE MIR 47 254 -8 587 271 32 0 chr20 56779623 56779778 -9888227 + MIR SINE MIR 84 243 -19 1631 132 45 15 chr20 56779997 56780263 -9887742 - AluSg SINE Alu -36 274 1 294 273 125 87 chr20 56781135 56781399 -9886606 - L2 LINE L2 -88 3225 2952 258 263 53 0 chr20 56781483 56781559 -9886446 - L2 LINE L2 -519 2795 2716 183 325 135 8 chr20 56781605 56781731 -9886274 - MIR SINE MIR -64 198 57 265 311 0 66 chr20 56782631 56782737 -9885268 - L2 LINE L2 0 3272 3174 275 256 13 13 chr20 56782986 56783064 -9884941 + MLT1J LTR MaLR 100 177 -334 22 0 0 0 chr20 56783229 56783251 -9884754 + GC_rich Low_complexity Low_complexity 1 22 0 460 205 25 140 chr20 56783669 56783869 -9884136 - MER5B DNA MER1_type -1 177 1 285 347 29 40 chr20 56783937 56784089 -9883916 + MIR3 SINE MIR 6 161 -47 193 330 34 11 chr20 56784692 56784780 -9883225 - MIR3 SINE MIR -2 206 117 1135 176 42 92 chr20 56784885 56785010 -9882995 + MER33 DNA MER1_type 1 131 -2454 831 484 61 0 chr20 56785010 56785287 -9882718 + AluSx SINE Alu 1 294 -8 1135 176 42 92 chr20 56785287 56785471 -9882534 + MER33 DNA MER1_type 131 294 -2291 2184 128 3 0 chr20 56785471 56785783 -9882222 - AluSq SINE Alu 0 313 1 1135 176 42 92 chr20 56785783 56785808 -9882197 + MER33 DNA MER1_type 294 319 -5 1260 179 4 72 chr20 56786497 56786760 -9881245 - AluJo SINE Alu -30 282 38 21 71 0 0 chr20 56787596 56787638 -9880367 + AT_rich Low_complexity Low_complexity 1 42 0 785 259 85 9 chr20 56788236 56788564 -9879441 - L1MC4 LINE L1 -2 8040 7688 1476 148 141 10 chr20 56789563 56789861 -9878144 + MSTA LTR MaLR 92 428 0 21 0 0 0 chr20 56789998 56790019 -9877986 + AT_rich Low_complexity Low_complexity 1 21 0 983 48 0 16 chr20 56790956 56791082 -9876923 + AluY SINE Alu 182 305 -6 2309 220 96 58 chr20 56792445 56792915 -9875090 - L1ME1 LINE L1 -1 6165 5714 333 120 0 20 chr20 56792915 56792965 -9875040 - MSTA LTR MaLR -59 369 321 2309 220 96 58 chr20 56792965 56793467 -9874538 - L1ME1 LINE L1 -452 5714 5123 189 0 0 0 chr20 56793564 56793585 -9874420 + (T)n Simple_repeat Simple_repeat 1 21 0 402 235 20 10 chr20 56794218 56794320 -9873685 - L1MC4a LINE L1 -1222 6586 6484 497 349 138 7 chr20 56795307 56795605 -9872400 - L2 LINE L2 -5 3308 2972 2122 124 0 19 chr20 56796325 56796640 -9871365 + AluSx SINE Alu 1 309 -3 303 315 82 47 chr20 56797632 56797911 -9870094 + L2 LINE L2 3025 3313 0 2154 102 3 0 chr20 56797963 56798270 -9869735 + AluSx SINE Alu 1 308 0 238 320 177 27 chr20 56798947 56799094 -9868911 + L2 LINE L2 3104 3272 0 21 0 0 0 chr20 56799433 56799454 -9868551 + AT_rich Low_complexity Low_complexity 1 21 0 224 339 0 0 chr20 56799565 56799627 -9868378 - L2 LINE L2 -22 3291 3230 3830 80 4 0 chr20 56800150 56800663 -9867342 - L1PA10 LINE L1 0 6168 5654 557 315 98 58 chr20 56800924 56801403 -9866602 + MLT1J LTR MaLR 12 509 -2 564 282 28 28 chr20 56802832 56803013 -9864992 + MIR SINE MIR 7 187 -75 301 398 18 0 chr20 56803603 56803716 -9864289 - L2 LINE L2 -13 3259 3145 339 239 14 0 chr20 56804117 56804188 -9863817 - L2 LINE L2 -5 3308 3237 26 30 0 0 chr20 56804232 56804265 -9863740 + AT_rich Low_complexity Low_complexity 1 33 0 243 316 32 11 chr20 56804427 56804522 -9863483 + MER5B DNA MER1_type 81 177 -1 1212 178 48 0 chr20 56805028 56805259 -9862746 + MSTB LTR MaLR 185 426 0 1911 186 27 34 chr20 56805259 56805715 -9862290 + L1MC3 LINE L1 6142 6343 -1 183 189 0 0 chr20 56805723 56805760 -9862245 + MIR SINE MIR 216 252 -10 722 312 126 23 chr20 56805967 56806445 -9861560 - MLT1L LTR MaLR -73 542 16 4329 250 60 16 chr20 56806500 56806740 -9861265 + L1MD1 LINE L1 18 246 -6294 216 97 0 0 chr20 56806740 56806771 -9861234 + (CA)n Simple_repeat Simple_repeat 1 31 0 4329 250 60 16 chr20 56806771 56807444 -9860561 + L1MD1 LINE L1 246 1001 -5539 188 33 0 33 chr20 56807444 56807474 -9860531 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 4329 250 60 16 chr20 56807474 56807776 -9860229 + L1MD1 LINE L1 1001 1288 -5252 4024 206 85 35 chr20 56807782 56809112 -9858893 + L1MD1 LINE L1 1362 2803 -3918 2035 132 156 5 chr20 56809112 56809484 -9858521 + MSTA LTR MaLR 1 428 0 4024 206 85 35 chr20 56809484 56809533 -9858472 + L1MD1 LINE L1 2803 2848 -3873 11904 182 14 14 chr20 56809582 56810207 -9857798 - L1MA3 LINE L1 -101 7623 7000 1593 168 60 46 chr20 56810207 56810577 -9857428 - THE1C LTR MaLR 0 375 1 11904 182 14 14 chr20 56810577 56812302 -9855703 - L1MA3 LINE L1 -724 7000 5100 491 0 17 0 chr20 56812302 56812361 -9855644 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 11904 182 14 14 chr20 56812361 56813259 -9854746 - L1MA3 LINE L1 -2624 5100 4204 19879 170 28 12 chr20 56813264 56815029 -9852976 - L1MA3 LINE L1 -3944 3621 1887 2232 112 0 3 chr20 56815029 56815334 -9852671 - AluSg SINE Alu -6 304 1 19879 170 28 12 chr20 56815334 56817119 -9850886 - L1MA3 LINE L1 -5678 1887 12 558 250 5 15 chr20 56817130 56817330 -9850675 + L1MD1 LINE L1 2824 3021 -3519 1707 189 3 0 chr20 56817542 56817849 -9850156 + AluSc SINE Alu 1 308 -1 2855 234 107 35 chr20 56817884 56818200 -9849805 + L1MD1 LINE L1 4431 4723 -1913 2239 122 3 0 chr20 56818200 56818511 -9849494 - AluSx SINE Alu 0 312 1 2855 234 107 35 chr20 56818511 56818707 -9849298 + L1MD1 LINE L1 4723 4904 -1732 1858 168 36 33 chr20 56818707 56819070 -9848935 + THE1B LTR MaLR 1 364 0 2855 234 107 35 chr20 56819070 56819341 -9848664 + L1MD1 LINE L1 4904 5154 -1482 3358 5 13 0 chr20 56819341 56819772 -9848233 + L1PA2 LINE L1 5760 6195 0 2855 234 107 35 chr20 56819772 56821043 -9846962 + L1MD1 LINE L1 5154 6630 -6 1447 117 57 39 chr20 56821394 56821675 -9846330 - MER7A DNA MER2_type 0 346 63 183 156 0 0 chr20 56821675 56821707 -9846298 + (TATATG)n Simple_repeat Simple_repeat 4 35 0 685 301 48 13 chr20 56821769 56821998 -9846007 + MIR SINE MIR 13 249 -13 455 264 0 0 chr20 56822854 56822960 -9845045 + MER20 DNA MER1_type 90 195 -24 216 358 37 0 chr20 56823158 56823239 -9844766 + L2 LINE L2 3187 3270 -2 2659 17 0 0 chr20 56823646 56823941 -9844064 - AluYb8 SINE Alu -2 316 22 268 289 84 43 chr20 56823985 56824401 -9843604 + HAL1b LINE L1 916 1348 0 760 167 15 0 chr20 56824441 56824573 -9843432 - MLT2B2 LTR ERVL -381 134 1 1548 213 32 79 chr20 56825731 56826225 -9841780 + MLT1D LTR MaLR 35 505 0 255 349 9 9 chr20 56826553 56826662 -9841343 + MER5A DNA MER1_type 37 145 -44 282 372 55 30 chr20 56826963 56827127 -9840878 + L2 LINE L2 3104 3271 -1 254 260 10 60 chr20 56827326 56827426 -9840579 + L2 LINE L2 2514 2608 -706 * 650 307 174 25 chr20 56827420 56827788 -9840217 + L2 LINE L2 2884 3306 -7 2437 70 0 0 chr20 56828201 56828499 -9839506 + AluY SINE Alu 1 298 -13 6818 90 3 32 chr20 56829460 56829833 -9838172 - L1P2 LINE L1 -499 5656 5274 2945 6 0 0 chr20 56829833 56830151 -9837854 - AluYb8 SINE Alu 0 318 1 6818 90 3 32 chr20 56830151 56831008 -9836997 - L1P2 LINE L1 -881 5274 4449 581 86 0 0 chr20 56831006 56831087 -9836918 + L1P2 LINE L1 4372 4452 -1694 * 10256 134 31 30 chr20 56831074 56833213 -9834792 - L1P3 LINE L1 -4288 2173 10 3953 86 31 4 chr20 56833186 56833925 -9834080 - L1P3 LINE L1 -623 5846 5091 * 1853 198 84 41 chr20 56833927 56834641 -9833364 + L1 LINE L1 4673 5424 -743 187 30 30 30 chr20 56834788 56834821 -9833184 + (TTTTG)n Simple_repeat Simple_repeat 3 35 0 827 227 70 0 chr20 56835463 56835635 -9832370 - MER5A DNA MER1_type -3 186 3 459 242 211 0 chr20 56836046 56836207 -9831798 - MER58A DNA MER1_type -3 221 27 337 281 12 0 chr20 56836302 56836384 -9831621 - MER5B DNA MER1_type -37 141 59 367 299 10 0 chr20 56836807 56836904 -9831101 - MER5A DNA MER1_type -84 105 8 984 272 36 38 chr20 56837416 56837865 -9830140 - MLT1E LTR MaLR -68 525 96 1428 267 73 58 chr20 56838361 56838620 -9829385 + L1ME LINE L1 3 257 -5823 1901 161 3 0 chr20 56838620 56838919 -9829086 + AluSx SINE Alu 1 300 -12 1428 267 73 58 chr20 56838919 56839579 -9828426 + L1ME LINE L1 257 950 -5130 1981 123 43 10 chr20 56839579 56839879 -9828126 + AluSx SINE Alu 1 310 -2 1428 267 73 58 chr20 56839879 56840325 -9827680 + L1ME LINE L1 950 1388 -4692 447 343 56 26 chr20 56840336 56840569 -9827436 + MIR SINE MIR 23 262 0 368 288 216 0 chr20 56841358 56841511 -9826494 - MER5A DNA MER1_type 0 189 4 223 328 47 0 chr20 56842147 56842211 -9825794 - L2 LINE L2 -210 3062 2996 203 349 36 12 chr20 56843474 56843557 -9824448 + L3 LINE CR1 1486 1570 -7 5785 146 51 19 chr20 56843864 56844971 -9823034 - Tigger1 DNA MER2_type 0 2418 1277 1967 203 20 0 chr20 56844984 56845374 -9822631 + L1PA13 LINE L1 3 400 -6387 862 136 27 0 chr20 56845376 56845523 -9822482 + L1PA15 LINE L1 6013 6163 -2 6503 164 26 21 chr20 56845524 56846796 -9821209 - Tigger1 DNA MER2_type -1140 1278 1 26 30 0 0 chr20 56847203 56847236 -9820769 + AT_rich Low_complexity Low_complexity 1 33 0 352 235 42 0 chr20 56848390 56848484 -9819521 + MER5A DNA MER1_type 4 102 -87 21 57 0 0 chr20 56848546 56848581 -9819424 + AT_rich Low_complexity Low_complexity 1 35 0 3284 151 22 10 chr20 56848748 56849326 -9818679 - L1PA16 LINE L1 -9 6157 5573 6039 95 18 1 chr20 56849327 56850748 -9817257 - L1PA10 LINE L1 -2 6166 4729 681 181 97 14 chr20 56850848 56851019 -9816986 + AluJb SINE Alu 129 311 0 217 68 45 0 chr20 56852220 56852264 -9815741 + T-rich Low_complexity Low_complexity 1 46 0 2452 87 0 6 chr20 56852266 56852578 -9815427 - AluY SINE Alu 0 311 2 418 338 7 7 chr20 56852688 56852830 -9815175 + L2 LINE L2 3170 3311 -2 452 274 89 36 chr20 56853207 56853375 -9814630 + MIR SINE MIR 20 196 -66 233 106 30 30 chr20 56853398 56853464 -9814541 + (TA)n Simple_repeat Simple_repeat 2 67 0 311 133 0 17 chr20 56853508 56853568 -9814437 + (CAT)n Simple_repeat Simple_repeat 2 60 0 225 175 0 0 chr20 56855116 56855156 -9812849 + L2 LINE L2 3273 3312 -1 662 183 42 0 chr20 56856372 56856492 -9811513 - FLAM_C SINE Alu -5 138 14 1020 192 136 14 chr20 56856626 56856913 -9811092 + MER5C DNA MER1_type 3 324 0 466 229 42 98 chr20 56857213 56857449 -9810556 - L2 LINE L2 0 3313 3091 2226 62 17 10 chr20 56857478 56857766 -9810239 - AluY SINE Alu -21 290 1 2272 248 52 65 chr20 56857768 56858620 -9809385 - L2 LINE L2 -768 2546 1706 347 233 93 53 chr20 56859222 56859372 -9808633 - MLT1J2 LTR MaLR -46 404 249 349 242 42 0 chr20 56859399 56859494 -9808511 - MLT1J2 LTR MaLR -287 163 65 2506 80 0 0 chr20 56859556 56859857 -9808148 - AluSx SINE Alu -11 301 1 334 189 23 45 chr20 56860480 56860612 -9807393 + (TA)n Simple_repeat Simple_repeat 2 130 0 910 178 0 17 chr20 56860984 56861164 -9806841 - L1M2 LINE L1 -583 5729 5553 438 277 63 0 chr20 56861505 56861664 -9806341 + LTR33 LTR ERVL 9 177 -344 358 269 42 8 chr20 56861768 56861887 -9806118 + LTR33 LTR ERVL 316 438 -83 238 241 130 9 chr20 56862691 56862799 -9805206 - L2 LINE L2 -846 2468 2348 205 357 0 12 chr20 56863019 56863103 -9804902 + MIR SINE MIR 180 262 0 536 259 85 42 chr20 56863396 56863585 -9804420 + MIR SINE MIR 11 207 -55 25 31 0 0 chr20 56863960 56863992 -9804013 + AT_rich Low_complexity Low_complexity 1 32 0 938 261 131 0 chr20 56865401 56865692 -9802313 - LTR16A LTR ERVL -9 441 113 737 252 97 29 chr20 56865692 56865930 -9802075 - HERV16 LTR ERVL -3055 1941 1688 256 257 21 50 chr20 56866638 56866778 -9801227 - L1M4 LINE L1 -6322 220 85 324 0 0 0 chr20 56868349 56868385 -9799620 + (TG)n Simple_repeat Simple_repeat 2 37 0 212 339 68 25 chr20 56869700 56869818 -9798187 - MER5B DNA MER1_type -29 149 27 263 335 125 43 chr20 56870014 56870074 -9797931 - L2 LINE L2 0 3313 3259 2575 115 5 3 chr20 56870074 56870448 -9797557 + THE1C LTR MaLR 1 375 0 263 335 125 43 chr20 56870448 56870668 -9797337 - L2 LINE L2 -54 3259 3010 23 92 0 0 chr20 56870985 56871050 -9796955 + AT_rich Low_complexity Low_complexity 1 65 0 567 316 43 21 chr20 56871080 56871409 -9796596 - L1ME4a LINE L1 -293 5828 5493 33 43 0 0 chr20 56871586 56871633 -9796372 + AT_rich Low_complexity Low_complexity 1 47 0 216 286 71 0 chr20 56871832 56871888 -9796117 - MIR SINE MIR -170 92 33 315 0 0 0 chr20 56871896 56871931 -9796074 + (TA)n Simple_repeat Simple_repeat 2 36 0 447 236 0 14 chr20 56871934 56872078 -9795927 - AluY SINE Alu 0 311 170 222 383 11 0 chr20 56872320 56872414 -9795591 - L2 LINE L2 -362 2951 2857 228 282 35 12 chr20 56872692 56872777 -9795228 + MLT1I LTR MaLR 319 405 -4 21 0 0 0 chr20 56873249 56873270 -9794735 + AT_rich Low_complexity Low_complexity 1 21 0 954 9 0 0 chr20 56873514 56873622 -9794383 - AluY SINE Alu -35 276 169 787 206 94 6 chr20 56873696 56873856 -9794149 + MER58B DNA MER1_type 168 341 0 461 316 127 31 chr20 56874486 56874999 -9793006 + L3 LINE CR1 803 1422 -155 951 185 0 0 chr20 56875099 56875261 -9792744 - AluSg/x SINE Alu -13 299 138 25 51 0 0 chr20 56875911 56875950 -9792055 + AT_rich Low_complexity Low_complexity 1 39 0 207 0 0 0 chr20 56876080 56876103 -9791902 + (T)n Simple_repeat Simple_repeat 1 23 0 604 296 86 34 chr20 56876209 56876442 -9791563 - MIR SINE MIR -8 254 10 304 310 117 7 chr20 56876617 56876762 -9791243 + MIR SINE MIR 98 258 -4 497 374 76 9 chr20 56877045 56877256 -9790749 + MIR SINE MIR 3 227 -35 197 146 21 0 chr20 56877642 56877690 -9790315 + (CATA)n Simple_repeat Simple_repeat 2 50 0 339 256 8 16 chr20 56877699 56877828 -9790177 + (TA)n Simple_repeat Simple_repeat 1 128 0 22 0 0 0 chr20 56878550 56878572 -9789433 + AT_rich Low_complexity Low_complexity 1 22 0 2820 113 15 2 chr20 56880409 56880806 -9787199 + MER1A DNA MER1_type 1 402 -127 313 222 37 19 chr20 56880807 56880915 -9787090 + (TTATA)n Simple_repeat Simple_repeat 1 110 0 202 188 47 47 chr20 56880929 56881099 -9786906 + (TTATA)n Simple_repeat Simple_repeat 2 171 0 21 0 0 0 chr20 56881135 56881156 -9786849 + AT_rich Low_complexity Low_complexity 1 21 0 4914 228 43 3 chr20 56931179 56932537 -9735468 + L1 LINE L1 2998 4410 -1736 203 203 29 29 chr20 56932680 56932749 -9735256 + (TAA)n Simple_repeat Simple_repeat 1 69 0 294 243 100 14 chr20 56933214 56933354 -9734651 - L1ME LINE L1 -264 5857 5706 785 195 7 7 chr20 56933354 56933508 -9734497 + MLT1A1 LTR MaLR 1 154 -211 1168 208 127 0 chr20 56933510 56933842 -9734163 + L1PB4 LINE L1 5782 6155 -1 379 158 12 58 chr20 56934036 56934207 -9733798 + (CATATA)n Simple_repeat Simple_repeat 6 168 0 401 247 0 0 chr20 56934818 56934899 -9733106 + MIR SINE MIR 111 191 -71 511 160 0 21 chr20 56934951 56935045 -9732960 - AluJb SINE Alu -22 290 199 1248 254 48 8 chr20 56935153 56935547 -9732458 + Charlie1 DNA MER1_type 1423 1832 -929 226 278 0 0 chr20 56935554 56935608 -9732397 + L2 LINE L2 2440 2493 -821 311 225 0 56 chr20 56935613 56935702 -9732303 + L2 LINE L2 2637 2720 -594 1547 175 171 25 chr20 56935707 56936152 -9731853 + Charlie1 DNA MER1_type 1840 2349 -412 1203 204 26 0 chr20 56936154 56936380 -9731625 + AluJo SINE Alu 3 234 -78 353 206 137 20 chr20 56936380 56936482 -9731523 - MSTC LTR MaLR -314 114 1 683 246 131 20 chr20 56936680 56936879 -9731126 + MER58A DNA MER1_type 4 224 0 22 0 0 0 chr20 56936891 56936913 -9731092 + AT_rich Low_complexity Low_complexity 1 22 0 379 322 32 11 chr20 56936963 56937253 -9730752 - L1MC/D LINE L1 -526 5595 5476 2263 107 0 0 chr20 56937266 56937564 -9730441 + AluSg SINE Alu 1 298 -12 2246 107 0 10 chr20 56937824 56938134 -9729871 - AluSq SINE Alu 0 313 7 531 178 7 118 chr20 56938273 56938408 -9729597 - MER82 DNA MER2_type -533 120 1 1534 254 50 36 chr20 56938416 56939143 -9728862 + L1M4 LINE L1 2304 3040 -3106 3262 81 2 0 chr20 56939168 56939612 -9728393 + L1P LINE L1 4 448 -5698 205 322 53 66 chr20 56941695 56941847 -9726158 - L2 LINE L2 -840 2474 2325 349 250 63 9 chr20 56942091 56942272 -9725733 - MLT1H LTR MaLR -301 248 54 800 357 111 22 chr20 56942927 56943776 -9724229 - L2 LINE L2 -570 2744 1821 339 266 8 59 chr20 56944366 56944619 -9723386 + L1MEc LINE L1 2167 2366 -3849 1360 245 41 8 chr20 56944626 56944989 -9723016 - MER82 DNA MER2_type -7 646 272 2122 251 109 35 chr20 56945106 56945412 -9722593 - L1MEc LINE L1 -1796 4419 4137 198 0 0 0 chr20 56945412 56945434 -9722571 + (ATG)n Simple_repeat Simple_repeat 2 23 0 2387 46 0 3 chr20 56945436 56945720 -9722285 - AluY SINE Alu -28 283 1 2122 251 109 35 chr20 56945720 56946385 -9721620 - L1MEc LINE L1 -2078 4137 3373 307 326 128 14 chr20 56947390 56947531 -9720474 - MIR SINE MIR -16 246 90 183 348 52 26 chr20 56948023 56948138 -9719867 - MIR3 SINE MIR -54 154 37 2292 102 3 3 chr20 56948246 56948551 -9719454 - AluSc SINE Alu -4 305 1 324 228 31 47 chr20 56949687 56949814 -9718191 + MER3 DNA MER1_type 22 146 -63 343 307 99 65 chr20 56949836 56950076 -9717929 - L1MEc LINE L1 -4167 2229 1976 5078 36 2 0 chr20 56950076 56950682 -9717323 - L1PA4 LINE L1 -1 6154 5548 343 307 99 65 chr20 56950682 56950734 -9717271 - L1MEc LINE L1 -4420 1976 1927 1638 99 20 4 chr20 56950871 56951124 -9716881 + MER41A LTR ERV1 296 552 -2 520 207 27 0 chr20 56951153 56951264 -9716741 + MER81 DNA DNA 1 114 0 1723 200 91 45 chr20 56952509 56953328 -9714677 + L1MC/D LINE L1 4696 5538 -783 219 69 0 0 chr20 56953489 56953518 -9714487 + (CA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr20 56953654 56953676 -9714329 + AT_rich Low_complexity Low_complexity 1 22 0 2240 104 7 0 chr20 56954820 56955119 -9712886 + AluSg SINE Alu 2 302 -8 1669 144 0 0 chr20 56955911 56956147 -9711858 + AluSg SINE Alu 1 236 -74 4879 186 11 6 chr20 56956247 56957181 -9710824 - MSTA-int LTR MaLR -713 938 1 1740 168 70 0 chr20 56957181 56957497 -9710508 - MSTA LTR MaLR 0 428 91 1062 240 156 39 chr20 56960008 56960545 -9707460 + MLT1E1 LTR MaLR 55 654 0 585 139 30 0 chr20 56960647 56960748 -9707257 + L1MDa LINE L1 38 141 -6399 1548 118 4 0 chr20 56960748 56960977 -9707028 - MER4B LTR ERV1 0 610 381 210 200 0 20 chr20 56961262 56961312 -9706693 + (TA)n Simple_repeat Simple_repeat 1 49 0 294 29 0 0 chr20 56961344 56961379 -9706626 + (TG)n Simple_repeat Simple_repeat 2 36 0 218 215 37 84 chr20 56963852 56963959 -9704046 - MIR SINE MIR -59 203 102 4604 106 50 23 chr20 56964079 56964685 -9703320 - Tigger1 DNA MER2_type -1589 829 196 1961 138 41 0 chr20 56964685 56964975 -9703030 + AluSx SINE Alu 1 302 -10 4604 106 50 23 chr20 56964975 56965144 -9702861 - Tigger1 DNA MER2_type -2222 196 33 272 273 23 11 chr20 56965429 56965517 -9702488 + MER81 DNA DNA 26 114 0 295 244 24 0 chr20 56965559 56965641 -9702364 - L1ME LINE L1 -312 5809 5726 21 0 0 0 chr20 56965641 56965662 -9702343 + AT_rich Low_complexity Low_complexity 1 21 0 16010 34 0 0 chr20 56965789 56968497 -9699508 - L1PA3 LINE L1 -3 6152 3445 458 302 232 21 chr20 56968773 56969236 -9698769 - L2 LINE L2 -8 3264 2705 565 287 64 78 chr20 56969295 56969716 -9698289 + MLT1J LTR MaLR 1 415 -96 390 256 43 17 chr20 56969806 56969923 -9698082 + MIR SINE MIR 109 228 -34 299 211 29 53 chr20 56969934 56970105 -9697900 + (TAGA)n Simple_repeat Simple_repeat 4 170 0 * 311 212 29 35 chr20 56970022 56970192 -9697813 + (CTAG)n Simple_repeat Simple_repeat 1 169 0 * 411 174 27 54 chr20 56970139 56970323 -9697682 + (TAGA)n Simple_repeat Simple_repeat 1 179 0 411 174 27 54 chr20 56970337 56970521 -9697484 + (TAGA)n Simple_repeat Simple_repeat 1 179 0 266 177 7 41 chr20 56970601 56970748 -9697257 + (TAGA)n Simple_repeat Simple_repeat 1 142 0 220 208 0 0 chr20 56970846 56970899 -9697106 + (TA)n Simple_repeat Simple_repeat 1 53 0 339 211 0 0 chr20 56970910 56971066 -9696939 + (TA)n Simple_repeat Simple_repeat 1 156 0 2160 109 11 0 chr20 56971072 56971357 -9696648 - AluSx SINE Alu -23 289 2 335 250 45 0 chr20 56971357 56971439 -9696566 + L1MC4 LINE L1 6620 6705 -1337 2127 116 3 0 chr20 56971451 56971735 -9696270 - AluSx SINE Alu -27 285 1 264 281 44 18 chr20 56971771 56971885 -9696120 - L2 LINE L2 -625 2689 2573 215 209 0 0 chr20 56972215 56972258 -9695747 + (CATAG)n Simple_repeat Simple_repeat 2 44 0 2027 158 33 0 chr20 56972302 56972638 -9695367 + MER7A DNA MER2_type 2 346 0 195 237 0 0 chr20 56972814 56972852 -9695153 + MIR SINE MIR 6 43 -219 2277 59 70 0 chr20 56973900 56974187 -9693818 - AluY SINE Alu -2 309 3 498 254 0 8 chr20 56974197 56974315 -9693690 - MER3 DNA MER1_type -63 146 30 31 0 0 0 chr20 56974972 56975003 -9693002 + AT_rich Low_complexity Low_complexity 1 31 0 1929 151 0 3 chr20 56975008 56975292 -9692713 + AluSx SINE Alu 4 286 -26 261 210 0 0 chr20 56975321 56975383 -9692622 + (TG)n Simple_repeat Simple_repeat 2 63 0 241 331 131 15 chr20 56975395 56975525 -9692480 - L2 LINE L2 -27 3286 3142 1735 188 90 49 chr20 56975574 56975984 -9692021 + MLT1D LTR MaLR 20 446 -59 41824 31 35 1 chr20 56975984 56981877 -9686128 + L1HS LINE L1 4 6098 -57 1898 175 0 0 chr20 56981881 56982173 -9685832 - AluJb SINE Alu -18 294 3 27 0 0 0 chr20 56982175 56982202 -9685803 + AT_rich Low_complexity Low_complexity 1 27 0 236 257 0 57 chr20 56982351 56982456 -9685549 - HAL1b LINE L1 -943 405 307 1657 181 0 24 chr20 56983585 56983883 -9684122 - AluJo SINE Alu -17 295 5 198 336 19 37 chr20 56984037 56984144 -9683861 - L2 LINE L2 0 3272 3168 199 0 93 53 chr20 56984830 56984905 -9683100 + (CATAT)n Simple_repeat Simple_repeat 3 80 0 242 250 17 75 chr20 56985054 56985174 -9682831 - LTR16C LTR ERVL -2 489 377 3063 156 171 32 chr20 56988077 56988802 -9679203 - LTR1B LTR ERV1 0 826 1 688 244 81 15 chr20 56988925 56989122 -9678883 - MER20 DNA MER1_type -9 210 1 390 233 33 17 chr20 56989608 56989728 -9678277 - MER33 DNA MER1_type -170 154 33 395 278 130 25 chr20 56989833 56989995 -9678010 - MIR SINE MIR 0 262 84 289 328 25 5 chr20 56990784 56990988 -9677017 + MER113 DNA MER1_type? 1 208 -313 259 301 135 37 chr20 56991025 56991188 -9676817 - LTR33 LTR ERVL -1 520 342 292 252 152 20 chr20 56991457 56991608 -9676397 + MER113 DNA MER1_type? 337 507 -14 561 340 35 41 chr20 56991787 56992273 -9675732 + L1M4 LINE L1 2671 3153 -2993 36 53 0 0 chr20 56992378 56992435 -9675570 + AT_rich Low_complexity Low_complexity 1 57 0 2508 74 3 0 chr20 56992445 56992755 -9675250 + AluY SINE Alu 1 311 0 261 319 68 39 chr20 56992827 56993237 -9674768 + L1M4 LINE L1 3358 3779 -2367 308 293 43 21 chr20 56993242 56993382 -9674623 + L1M4 LINE L1 3805 3947 -2199 210 253 222 0 chr20 56993670 56993769 -9674236 + MIR SINE MIR 132 252 -10 343 369 67 0 chr20 56995822 56996001 -9672004 - MLT1K LTR MaLR -395 193 3 316 267 67 60 chr20 56997673 56997823 -9670182 + MER5B DNA MER1_type 1 151 -27 228 320 31 10 chr20 56998079 56998176 -9669829 + MER117 DNA MER1_type 98 196 -1 331 233 0 14 chr20 56998341 56998414 -9669591 + Charlie1 DNA MER1_type 1486 1557 -1204 265 239 0 75 chr20 56998423 56998490 -9669515 - MER2 DNA MER2_type 0 345 284 * 660 274 0 0 chr20 56998467 56998620 -9669385 - MER8 DNA MER2_type -60 179 27 3727 187 49 55 chr20 56998631 56998938 -9669067 + MER21B LTR ERV1 1 308 -555 264 30 0 0 chr20 56998938 56998971 -9669034 + (CA)n Simple_repeat Simple_repeat 2 34 0 3727 187 49 55 chr20 56998971 56999522 -9668483 + MER21B LTR ERV1 308 854 -9 2423 247 70 9 chr20 56999709 57000451 -9667554 + Charlie1 DNA MER1_type 1563 2349 -412 199 337 31 0 chr20 57001047 57001145 -9666860 + L2 LINE L2 2636 2736 -578 372 290 9 28 chr20 57001150 57001257 -9666748 + L2 LINE L2 2895 2999 -314 1085 274 49 70 chr20 57001418 57001849 -9666156 + MLT1H LTR MaLR 1 422 -127 232 222 0 0 chr20 57001965 57002010 -9665995 + L2 LINE L2 3193 3237 -35 237 273 0 39 chr20 57002989 57003066 -9664939 + CT-rich Low_complexity Low_complexity 3 76 0 360 230 0 22 chr20 57003082 57003221 -9664784 + CT-rich Low_complexity Low_complexity 3 138 0 274 317 9 16 chr20 57004206 57004356 -9663649 + L1ME LINE L1 5677 5824 -297 268 255 124 33 chr20 57004579 57004732 -9663273 + MIR SINE MIR 60 226 -36 2344 172 20 41 chr20 57004750 57005002 -9663003 - MLT1C LTR MaLR 0 446 226 2952 31 17 0 chr20 57005002 57005356 -9662649 - L1PA3 LINE L1 0 6155 5796 2344 172 20 41 chr20 57005356 57005578 -9662427 - MLT1C LTR MaLR -220 226 1 321 318 47 14 chr20 57006510 57006658 -9661347 - MLT1K LTR MaLR -64 524 372 305 314 23 76 chr20 57006842 57007014 -9660991 - MLT1K LTR MaLR -424 164 2 985 274 15 40 chr20 57007505 57007910 -9660095 - MLT2C1 LTR ERVL 0 397 3 2229 109 0 0 chr20 57008374 57008668 -9659337 - AluSg SINE Alu -15 295 2 499 318 37 5 chr20 57008864 57009053 -9658952 - L2 LINE L2 -1 3312 3118 34 24 0 0 chr20 57009077 57009118 -9658887 + AT_rich Low_complexity Low_complexity 1 41 0 321 165 66 66 chr20 57010090 57010181 -9657824 + MLT1E1 LTR MaLR 6 96 -558 * 1349 204 79 15 chr20 57010169 57010510 -9657495 + MLT1E1 LTR MaLR 221 566 -60 6575 70 17 0 chr20 57010510 57011119 -9656886 - L1PA7 LINE L1 0 6154 5543 2220 97 7 0 chr20 57011119 57011408 -9656597 + AluSq SINE Alu 1 291 -22 6575 70 17 0 chr20 57011408 57011798 -9656207 - L1PA7 LINE L1 -611 5543 5161 680 93 0 0 chr20 57011799 57011896 -9656109 + L1PA7 LINE L1 5055 5151 -995 451 259 54 49 chr20 57012237 57012442 -9655563 - MIR SINE MIR -4 258 53 306 0 0 0 chr20 57012548 57012582 -9655423 + (A)n Simple_repeat Simple_repeat 1 34 0 23 68 0 0 chr20 57012587 57012631 -9655374 + AT_rich Low_complexity Low_complexity 1 44 0 236 244 256 0 chr20 57013550 57013636 -9654369 - L2 LINE L2 -7 3306 3199 215 267 33 0 chr20 57013638 57013698 -9654307 - MIR SINE MIR -125 137 76 184 286 79 16 chr20 57013678 57013741 -9654264 + L2 LINE L2 3205 3271 -1 * 1106 194 51 0 chr20 57013977 57014173 -9653832 + MER58A DNA MER1_type 19 224 0 263 250 50 0 chr20 57014189 57014249 -9653756 - MIR SINE MIR -76 186 124 259 220 66 44 chr20 57014492 57014583 -9653422 - MER41E LTR ERV1 -62 450 358 1065 189 64 16 chr20 57014592 57014841 -9653164 - LTR43 LTR ERV1 -166 436 176 22 35 0 0 chr20 57015293 57015322 -9652683 + AT_rich Low_complexity Low_complexity 1 29 0 291 327 10 0 chr20 57015451 57015552 -9652453 - Charlie8 DNA MER1_type -2198 219 118 535 313 88 29 chr20 57015772 57016191 -9651814 + Charlie7 DNA MER1_type 106 549 -2063 6574 194 10 5 chr20 57016198 57017583 -9650422 - L1 LINE L1 -1214 4932 3541 2919 127 9 2 chr20 57017583 57017673 -9650332 + L1PB1 LINE L1 5684 5772 -379 261 0 0 0 chr20 57017673 57017702 -9650303 + (TG)n Simple_repeat Simple_repeat 2 30 0 2919 127 9 2 chr20 57017702 57018075 -9649930 + L1PB1 LINE L1 5772 6151 0 2591 157 7 0 chr20 57018420 57018865 -9649140 + L1MB3 LINE L1 5723 6170 -13 2505 183 164 10 chr20 57019648 57020072 -9647933 - L1MB7 LINE L1 -25 6159 5802 2738 210 4 2 chr20 57020072 57020576 -9647429 - LTR10B LTR ERV1 0 505 1 2505 183 164 10 chr20 57020576 57020857 -9647148 - L1MB7 LINE L1 -382 5802 5353 503 293 64 20 chr20 57020973 57021222 -9646783 - L1ME3A LINE L1 -1 6169 5910 1818 181 0 0 chr20 57022788 57023070 -9644935 + AluSx SINE Alu 1 282 -30 24 85 0 0 chr20 57023080 57023139 -9644866 + AT_rich Low_complexity Low_complexity 1 59 0 439 134 39 39 chr20 57023139 57023318 -9644687 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 183 111 32 48 chr20 57023346 57023409 -9644596 + (TATAG)n Simple_repeat Simple_repeat 4 65 0 412 139 35 30 chr20 57023433 57023668 -9644337 + (TATAG)n Simple_repeat Simple_repeat 1 236 0 682 83 65 0 chr20 57023671 57023839 -9644166 + (CTATA)n Simple_repeat Simple_repeat 2 180 0 670 97 35 65 chr20 57023886 57024257 -9643748 + (CTATA)n Simple_repeat Simple_repeat 1 359 0 1610 217 31 33 chr20 57024737 57025156 -9642849 - LTR52 LTR ERVL -3 418 1 192 238 0 0 chr20 57025972 57026035 -9641970 + (TATG)n Simple_repeat Simple_repeat 2 64 0 596 141 79 0 chr20 57026052 57026462 -9641543 + (TA)n Simple_repeat Simple_repeat 1 442 0 313 284 18 18 chr20 57026465 57026574 -9641431 - L1MC4 LINE L1 -1339 6703 6595 797 99 30 25 chr20 57026578 57026811 -9641194 + (TA)n Simple_repeat Simple_repeat 1 234 0 330 223 97 39 chr20 57026813 57026916 -9641089 - L1MC4 LINE L1 -1339 6703 6595 2085 118 7 26 chr20 57027639 57027944 -9640061 - AluSx SINE Alu -13 299 1 2267 79 0 0 chr20 57029238 57029529 -9638476 + AluY SINE Alu 1 291 -20 1826 155 0 50 chr20 57030348 57030670 -9637335 - AluJb SINE Alu -6 306 1 5004 199 167 44 chr20 57031095 57032609 -9635396 - MER52A LTR ERV1 0 1755 55 1279 302 147 29 chr20 57034769 57035898 -9632107 + L2 LINE L2 1961 3291 -22 239 287 78 62 chr20 57036546 57036675 -9631330 + MIR SINE MIR 108 238 -24 2054 121 25 0 chr20 57037352 57037633 -9630372 - AluSc SINE Alu -21 288 1 1290 260 68 37 chr20 57039990 57040501 -9627504 + MLT1E LTR MaLR 2 528 -65 1629 185 154 9 chr20 57040639 57041061 -9626944 + MLT1D LTR MaLR 23 505 0 611 199 65 126 chr20 57041667 57041898 -9626107 + MER20 DNA MER1_type 1 217 -2 426 280 8 8 chr20 57042632 57042757 -9625248 + MLT1J1 LTR MaLR 43 167 -279 373 214 71 0 chr20 57042964 57043048 -9624957 - L1MC4 LINE L1 -1339 6703 6614 331 311 0 0 chr20 57042972 57043062 -9624943 + L1MC4 LINE L1 6614 6703 -1339 * 2133 103 7 3 chr20 57043071 57043353 -9624652 - AluSp SINE Alu -30 283 1 1860 203 139 20 chr20 57043446 57043984 -9624021 - MLT1E2 LTR MaLR -24 602 1 488 301 26 0 chr20 57044456 57044612 -9623393 - MER117 DNA MER1_type -8 189 30 23 0 0 0 chr20 57044689 57044712 -9623293 + AT_rich Low_complexity Low_complexity 1 23 0 380 258 86 0 chr20 57045987 57046115 -9621890 + Charlie8 DNA MER1_type 41 179 -2238 361 293 0 0 chr20 57046258 57046340 -9621665 + MER5A DNA MER1_type 11 92 -97 1187 246 59 44 chr20 57046718 57047173 -9620832 + MLT1C LTR MaLR 6 467 0 199 194 0 0 chr20 57047173 57047209 -9620796 + MER5B DNA MER1_type 6 41 -137 413 183 204 78 chr20 57047288 57047430 -9620575 + MER5A DNA MER1_type 29 188 -1 295 261 122 17 chr20 57048503 57048618 -9619387 - MIR SINE MIR -64 198 72 300 344 72 0 chr20 57048940 57049065 -9618940 - L2 LINE L2 0 3313 3180 471 303 103 44 chr20 57049418 57049738 -9618267 + L2 LINE L2 2622 2960 -354 506 284 132 16 chr20 57049843 57050033 -9617972 + MIR SINE MIR 1 212 -50 535 234 57 63 chr20 57050386 57050561 -9617444 - MER58A DNA MER1_type -25 199 26 756 237 69 28 chr20 57050590 57050881 -9617124 + LTR37A LTR ERV1 47 349 -77 1440 126 9 19 chr20 57050883 57051098 -9616907 + AluSx SINE Alu 1 213 -99 653 118 0 0 chr20 57051143 57051263 -9616742 + AluSx SINE Alu 198 317 0 268 147 27 40 chr20 57051263 57051338 -9616667 + LTR37A LTR ERV1 353 426 0 184 300 20 0 chr20 57051657 57051707 -9616298 + L2 LINE L2 3252 3302 -11 203 138 0 0 chr20 57051895 57051924 -9616081 + (CA)n Simple_repeat Simple_repeat 1 29 0 2286 81 0 0 chr20 57052621 57052965 -9615040 + L1P LINE L1 2794 3137 -3009 21 36 0 0 chr20 57053056 57053084 -9614921 + AT_rich Low_complexity Low_complexity 1 28 0 2018 140 10 0 chr20 57053449 57053742 -9614263 + AluSq SINE Alu 1 296 -17 716 256 26 5 chr20 57053792 57053987 -9614018 + MER20 DNA MER1_type 19 217 -2 370 260 0 21 chr20 57054037 57054133 -9613872 + L1MC4 LINE L1 6610 6703 -1339 578 279 60 35 chr20 57054274 57054475 -9613530 - MIR SINE MIR -21 241 36 214 195 0 0 chr20 57055014 57055055 -9612950 + A-rich Low_complexity Low_complexity 1 41 0 35 0 0 0 chr20 57055612 57055647 -9612358 + AT_rich Low_complexity Low_complexity 1 35 0 239 266 211 16 chr20 57055647 57055775 -9612230 + MIR SINE MIR 110 262 0 343 305 219 7 chr20 57055814 57055965 -9612040 + MER5A DNA MER1_type 7 189 0 350 322 7 40 chr20 57055973 57056122 -9611883 + MIR SINE MIR 119 262 0 878 231 21 29 chr20 57056446 57056689 -9611316 - MLT1F LTR MaLR -2 565 325 892 225 3 5 chr20 57056702 57056905 -9611100 - MLT1F LTR MaLR -354 213 1 985 281 14 58 chr20 57057757 57058174 -9609831 + L2 LINE L2 2915 3313 0 25 0 0 0 chr20 57059225 57059250 -9608755 + AT_rich Low_complexity Low_complexity 1 25 0 244 365 84 6 chr20 57059893 57060060 -9607945 - MIR3 SINE MIR -9 199 20 254 305 85 12 chr20 57060191 57060273 -9607732 + MER5A DNA MER1_type 102 189 0 324 265 49 152 chr20 57060777 57061190 -9606815 + L2 LINE L2 2837 3198 -115 521 224 124 80 chr20 57061190 57061391 -9606614 - MER63A DNA MER1_type 0 210 1 324 265 49 152 chr20 57061391 57061445 -9606560 + L2 LINE L2 3198 3256 -57 457 176 19 0 chr20 57061998 57062106 -9605899 + L1PA15 LINE L1 5222 5331 -815 2273 97 0 42 chr20 57062107 57062418 -9605587 + AluSq SINE Alu 1 298 -15 4434 134 16 4 chr20 57062422 57063133 -9604872 + L1PA15 LINE L1 5446 6164 -1 341 258 31 47 chr20 57064599 57064727 -9603278 - MER5B DNA MER1_type -2 176 51 289 280 140 5 chr20 57064936 57065122 -9602883 - MER102b DNA MER1_type -23 318 108 1016 302 62 19 chr20 57065466 57066043 -9601962 - L2 LINE L2 -94 3219 2603 345 129 0 0 chr20 57066828 57066898 -9601107 + (TG)n Simple_repeat Simple_repeat 2 71 0 341 308 111 0 chr20 57066967 57067084 -9600921 - L2 LINE L2 -4 3309 3180 * 450 306 55 11 chr20 57067077 57067260 -9600745 - MIR SINE MIR 0 262 72 22 35 0 0 chr20 57067740 57067769 -9600236 + AT_rich Low_complexity Low_complexity 1 29 0 1761 163 50 50 chr20 57068309 57068708 -9599297 + MSTB LTR MaLR 1 399 -27 1992 136 0 17 chr20 57068732 57069026 -9598979 + AluSx SINE Alu 1 289 -23 2237 84 19 0 chr20 57069043 57069354 -9598651 - L1PA12 LINE L1 0 6168 5852 225 284 81 0 chr20 57069395 57069469 -9598536 + MIR SINE MIR 155 234 -28 1796 140 31 10 chr20 57069507 57069799 -9598206 - AluSx SINE Alu -14 298 1 542 313 153 33 chr20 57069799 57070354 -9597651 - L2 LINE L2 -7 3306 2681 261 208 56 28 chr20 57070444 57070516 -9597489 - MIR3 SINE MIR -11 197 124 238 319 11 11 chr20 57072485 57072576 -9595429 - MIR SINE MIR -145 117 27 1904 153 17 0 chr20 57072944 57073238 -9594767 + AluSx SINE Alu 1 299 -13 884 263 12 44 chr20 57074323 57074574 -9593431 + MIR SINE MIR 19 261 -1 189 393 80 0 chr20 57074860 57074972 -9593033 + MIR SINE MIR 36 156 -106 23 54 0 0 chr20 57075285 57075322 -9592683 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr20 57076371 57076393 -9591612 + AT_rich Low_complexity Low_complexity 1 22 0 226 261 14 14 chr20 57077243 57077312 -9590693 + CT-rich Low_complexity Low_complexity 3 71 0 428 342 136 43 chr20 57077312 57077810 -9590195 - L2 LINE L2 -5 3267 2735 535 314 109 19 chr20 57078546 57079071 -9588934 + L1ME4a LINE L1 5539 6110 -11 1564 171 11 49 chr20 57079651 57080020 -9587985 + L1MA8 LINE L1 5903 6257 -34 29 28 0 0 chr20 57080033 57080069 -9587936 + AT_rich Low_complexity Low_complexity 1 36 0 186 277 198 20 chr20 57081236 57081337 -9586668 + MIR SINE MIR 134 252 -10 652 274 79 28 chr20 57081626 57081841 -9586164 - MIR SINE MIR -17 245 20 270 315 92 27 chr20 57082684 57082868 -9585137 - MIR SINE MIR -2 260 65 1679 193 105 73 chr20 57083015 57083617 -9584388 + MER74B LTR ERVL 1 621 -1 653 231 0 0 chr20 57083724 57083854 -9584151 + FLAM_A SINE Alu 1 130 -3 396 0 0 0 chr20 57083899 57083943 -9584062 + (TG)n Simple_repeat Simple_repeat 2 45 0 1026 188 26 26 chr20 57084039 57084305 -9583700 - L1MD3 LINE L1 0 7995 7730 2087 119 7 0 chr20 57085200 57085504 -9582501 + AluSc SINE Alu 1 306 0 2198 99 20 0 chr20 57085880 57086172 -9581833 + AluSq SINE Alu 1 298 -15 452 217 76 32 chr20 57086483 57086640 -9581365 + L1MC4a LINE L1 5709 5872 -1936 3321 128 49 31 chr20 57086686 57086835 -9581170 + MER7C DNA MER2_type 5 150 -2878 1836 135 21 4 chr20 57086835 57087116 -9580889 + AluSx SINE Alu 1 286 -26 3321 128 49 31 chr20 57087116 57087553 -9580452 + MER7C DNA MER2_type 150 602 0 2139 96 0 4 chr20 57088198 57088479 -9579526 + AluSp SINE Alu 22 301 -12 267 269 17 34 chr20 57088946 57089065 -9578940 + MER103 DNA DNA 3 119 -47 308 294 14 0 chr20 57089396 57089495 -9578510 + MIR SINE MIR 52 152 -56 2488 87 0 0 chr20 57089531 57089842 -9578163 + AluY SINE Alu 1 311 0 200 268 71 0 chr20 57089934 57089990 -9578015 + MIR SINE MIR 103 162 -100 1355 267 88 50 chr20 57090825 57091532 -9576473 + MER20B DNA MER1_type 34 767 -16 471 321 69 19 chr20 57092754 57093016 -9574989 + L2 LINE L2 3037 3311 -2 2574 49 0 0 chr20 57093174 57093478 -9574527 + AluY SINE Alu 1 304 -7 26 30 0 0 chr20 57094269 57094302 -9573703 + AT_rich Low_complexity Low_complexity 1 33 0 216 0 0 0 chr20 57095687 57095711 -9572294 + (GA)n Simple_repeat Simple_repeat 2 25 0 287 116 0 0 chr20 57095879 57095922 -9572083 - LTR16A1 LTR ERVL -1 456 414 438 302 52 57 chr20 57096022 57096270 -9571735 + MLT1K LTR MaLR 342 588 0 195 42 0 0 chr20 57096791 57096815 -9571190 + (CAAAAA)n Simple_repeat Simple_repeat 4 27 0 4311 120 60 17 chr20 57097074 57097230 -9570775 - L1PA16 LINE L1 -9 6157 6009 1795 118 4 4 chr20 57097230 57097476 -9570529 - AluSx SINE Alu -18 294 49 4311 120 60 17 chr20 57097476 57098035 -9569970 - L1PA16 LINE L1 -157 6009 5411 274 272 43 0 chr20 57098562 57098654 -9569351 - L1ME LINE L1 -272 5849 5754 653 248 13 0 chr20 57099588 57099741 -9568264 - MER45A DNA AcHobo 0 178 24 425 210 38 48 chr20 57099823 57100009 -9567996 + L1MA4A LINE L1 5937 6120 -183 332 179 28 65 chr20 57100010 57100062 -9567943 + L1MA4A LINE L1 6103 6102 -54 2189 135 114 5 chr20 57100062 57100447 -9567558 - MSTA LTR MaLR -1 427 1 332 179 28 65 chr20 57100447 57100502 -9567503 + L1MA4A LINE L1 6101 6156 0 229 257 14 0 chr20 57100573 57100647 -9567358 + MER116 DNA Mariner 6 80 0 598 293 49 34 chr20 57100968 57101292 -9566713 - MLT1J LTR MaLR -179 332 4 2069 136 7 7 chr20 57101306 57101608 -9566397 - AluSx SINE Alu -10 302 1 207 0 0 0 chr20 57102573 57102596 -9565409 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2278 68 0 0 chr20 57102600 57102881 -9565124 - AluY SINE Alu -29 282 2 241 268 144 10 chr20 57103720 57103817 -9564188 - L2 LINE L2 -3 3310 3201 961 218 87 69 chr20 57104121 57104456 -9563549 + MER58B DNA MER1_type 1 341 0 1336 197 50 62 chr20 57104836 57104995 -9563010 + MER96B DNA MER1_type 1 160 -257 474 18 0 0 chr20 57104995 57105050 -9562955 + (TA)n Simple_repeat Simple_repeat 1 55 0 1469 193 50 0 chr20 57105050 57105309 -9562696 - AluJb SINE Alu -20 292 21 1336 197 50 62 chr20 57105309 57105570 -9562435 + MER96B DNA MER1_type 158 417 0 433 237 34 59 chr20 57106209 57106327 -9561678 - MIR SINE MIR -117 145 31 364 252 49 41 chr20 57106482 57106605 -9561400 - MIR3 SINE MIR 0 208 85 33 0 0 0 chr20 57106652 57106685 -9561320 + AT_rich Low_complexity Low_complexity 1 33 0 752 246 94 66 chr20 57107364 57107741 -9560264 + MER20B DNA MER1_type 18 383 -400 1225 197 96 42 chr20 57107741 57108097 -9559908 - THE1C LTR MaLR 0 375 1 752 246 94 66 chr20 57108097 57108221 -9559784 + MER20B DNA MER1_type 383 502 -281 2732 85 0 0 chr20 57108221 57108575 -9559430 + THE1A LTR MaLR 2 355 0 11836 85 9 5 chr20 57108575 57110149 -9557856 + THE1A-int LTR MaLR 1 1580 0 2551 102 0 17 chr20 57110149 57110510 -9557495 + THE1A LTR MaLR 1 355 0 752 246 94 66 chr20 57110510 57110677 -9557328 + MER20B DNA MER1_type 501 768 -15 206 313 31 52 chr20 57110746 57110842 -9557163 - MIR3 SINE MIR -7 201 108 193 270 48 16 chr20 57110882 57110945 -9557060 + L3 LINE CR1 1237 1301 -276 186 43 0 0 chr20 57110996 57111019 -9556986 + (T)n Simple_repeat Simple_repeat 1 23 0 286 330 0 11 chr20 57111850 57111938 -9556067 + L2 LINE L2 3186 3272 0 201 276 31 141 chr20 57111942 57112105 -9555900 + L3 LINE CR1 1427 1571 -6 387 343 111 21 chr20 57112536 57112759 -9555246 - L2 LINE L2 -313 3000 2765 236 375 33 20 chr20 57114121 57114273 -9553732 + MER5B DNA MER1_type 3 156 -22 25 0 0 0 chr20 57114586 57114611 -9553394 + AT_rich Low_complexity Low_complexity 1 25 0 581 250 93 39 chr20 57115199 57115403 -9552602 + MIR SINE MIR 48 262 0 722 304 78 59 chr20 57115589 57115745 -9552260 - L2 LINE L2 0 3313 3161 2076 150 3 10 chr20 57115745 57116058 -9551947 + AluSx SINE Alu 1 311 -1 722 304 78 59 chr20 57116058 57116326 -9551679 - L2 LINE L2 -152 3161 2881 340 229 165 0 chr20 57116408 57116517 -9551488 - LTR16A LTR ERVL -20 430 304 2056 120 133 8 chr20 57116521 57116896 -9551109 + MSTA LTR MaLR 1 422 -6 618 307 37 37 chr20 57116900 57117200 -9550805 - LTR16A LTR ERVL -150 300 1 373 267 17 9 chr20 57117201 57117317 -9550688 + MER94 DNA DNA 6 122 -12 1228 254 27 27 chr20 57118034 57118444 -9549561 + Charlie4a DNA MER1_type 17 426 -82 2464 156 25 31 chr20 57118689 57119199 -9548806 - MER41B LTR ERV1 -9 597 130 183 80 0 0 chr20 57119722 57119747 -9548258 + (A)n Simple_repeat Simple_repeat 1 25 0 2396 93 68 0 chr20 57120028 57120381 -9547624 + MER51B LTR ERV1 1 377 0 416 209 109 0 chr20 57120388 57120498 -9547507 - MER94 DNA DNA -11 123 2 778 196 104 70 chr20 57120917 57121244 -9546761 + LTR37A LTR ERV1 89 426 0 650 214 82 13 chr20 57122092 57122251 -9545754 - MER45A DNA AcHobo -1 177 8 1951 226 75 40 chr20 57122314 57122395 -9545610 + MER72 LTR ERV1 1 78 -644 2519 59 0 3 chr20 57122395 57122698 -9545307 - AluY SINE Alu -9 302 1 1951 226 75 40 chr20 57122698 57123270 -9544735 + MER72 LTR ERV1 78 677 -45 273 163 0 0 chr20 57123270 57123319 -9544686 + L1PA8 LINE L1 6005 6053 -119 993 150 0 0 chr20 57123272 57123432 -9544573 + L1PA10 LINE L1 6006 6165 -3 3209 117 74 25 chr20 57123451 57123979 -9544026 + MER41C LTR ERV1 1 554 0 279 185 0 0 chr20 57124057 57124111 -9543894 + MER72 LTR ERV1 669 722 0 2168 196 30 22 chr20 57124168 57124663 -9543342 - MLT1D LTR MaLR -6 499 1 451 185 33 0 chr20 57125126 57125218 -9542787 + MER53 DNA DNA 1 95 -94 751 220 103 84 chr20 57125547 57125883 -9542122 + MER110A LTR ERV1 145 468 0 2447 163 94 22 chr20 57126117 57126671 -9541334 - LTR49 LTR ERV1 -1 594 1 580 249 76 0 chr20 57126771 57126956 -9541049 + LTR37A LTR ERV1 1 199 -227 1967 189 41 14 chr20 57126956 57127350 -9540655 - MSTB LTR MaLR 0 426 19 3642 85 44 24 chr20 57127350 57127893 -9540112 + MER41A LTR ERV1 1 554 0 1967 189 41 14 chr20 57127893 57127911 -9540094 - MSTB LTR MaLR -407 19 3 639 239 40 9 chr20 57127916 57128138 -9539867 + LTR37A LTR ERV1 198 426 0 1143 190 71 45 chr20 57128204 57128637 -9539368 + MER67D LTR ERV1 2 509 -5 1896 161 0 13 chr20 57129701 57129999 -9538006 - AluSx SINE Alu -18 294 1 231 283 57 19 chr20 57130105 57130211 -9537794 - L2 LINE L2 -226 3046 2937 471 304 103 30 chr20 57130244 57130507 -9537498 - L2 LINE L2 -497 2817 2536 197 306 61 20 chr20 57131158 57131256 -9536749 + MER5A DNA MER1_type 86 187 -2 467 252 137 47 chr20 57132134 57132499 -9535506 + L1ME2 LINE L1 4303 4700 -1446 360 189 0 0 chr20 57132582 57132656 -9535349 + (TG)n Simple_repeat Simple_repeat 2 75 0 21 36 0 0 chr20 57132844 57132872 -9535133 + AT_rich Low_complexity Low_complexity 1 28 0 1265 150 42 8 chr20 57133001 57133241 -9534764 - THE1C LTR MaLR 0 375 128 1834 220 121 28 chr20 57133242 57133823 -9534182 + L1ME2 LINE L1 5443 6077 -87 722 246 17 110 chr20 57133828 57134182 -9533823 - MLT1D LTR MaLR -4 501 181 743 178 53 58 chr20 57134218 57134443 -9533562 - MLT1D LTR MaLR -281 224 1 309 234 13 0 chr20 57134446 57134523 -9533482 + L1ME2 LINE L1 6077 6154 -10 1602 181 65 0 chr20 57134714 57135052 -9532953 - L1P LINE L1 -904 5242 4883 1356 91 39 0 chr20 57135053 57135261 -9532744 + L1PA13 LINE L1 5948 6163 0 474 286 46 63 chr20 57136057 57136232 -9531773 - MIR SINE MIR -11 251 80 1883 149 18 6 chr20 57136725 57137054 -9530951 + L1PB3 LINE L1 5819 6151 -3 396 0 0 0 chr20 57137689 57137733 -9530272 + (CA)n Simple_repeat Simple_repeat 2 45 0 1277 226 11 35 chr20 57138686 57139054 -9528951 + L1ME2 LINE L1 5804 6162 -2 401 314 21 48 chr20 57139160 57139348 -9528657 + MIR SINE MIR 31 213 -49 27 0 0 0 chr20 57139975 57140002 -9528003 + AT_rich Low_complexity Low_complexity 1 27 0 306 326 18 92 chr20 57140686 57140724 -9527281 - L2 LINE L2 -3 3269 3230 826 235 51 24 chr20 57140724 57140979 -9527026 + MIR SINE MIR 1 262 0 306 326 18 92 chr20 57140979 57141158 -9526847 - L2 LINE L2 -42 3230 3068 859 210 73 5 chr20 57141338 57141543 -9526462 + MER20 DNA MER1_type 1 219 0 323 119 0 17 chr20 57142515 57142574 -9525431 + L1MA9 LINE L1 6254 6311 -1 909 156 5 96 chr20 57142607 57142767 -9525238 + L1MC1 LINE L1 6123 6259 -74 2241 122 3 3 chr20 57142767 57143079 -9524926 - AluSx SINE Alu 0 312 1 909 156 5 96 chr20 57143079 57143136 -9524869 + L1MC1 LINE L1 6259 6320 -13 314 400 7 0 chr20 57143180 57143315 -9524690 - MIR3 SINE MIR -6 202 67 1549 252 43 5 chr20 57143417 57143833 -9524172 - MER70B LTR ERVL -143 435 4 1952 245 67 8 chr20 57143845 57144355 -9523650 + MLT1E1 LTR MaLR 115 654 0 1812 211 81 72 chr20 57144652 57145329 -9522676 + L1MC5 LINE L1 6921 7611 -350 180 0 0 0 chr20 57145329 57145349 -9522656 + (CA)n Simple_repeat Simple_repeat 2 21 0 1812 211 81 72 chr20 57145349 57145619 -9522386 + L1MC5 LINE L1 7611 7877 -84 286 345 184 14 chr20 57145686 57145909 -9522096 + L2 LINE L2 2716 2976 -338 3091 97 59 22 chr20 57147082 57147322 -9520683 + L1PA11 LINE L1 5648 5878 -296 2180 119 3 7 chr20 57147322 57147632 -9520373 + AluSg1 SINE Alu 1 309 0 3091 97 59 22 chr20 57147632 57147898 -9520107 + L1PA11 LINE L1 5878 6173 -1 491 250 6 26 chr20 57148487 57148643 -9519362 + L1ME4a LINE L1 5737 5889 -232 241 203 141 0 chr20 57149272 57149336 -9518669 - L2 LINE L2 -2 3270 3198 22 56 0 0 chr20 57149773 57149809 -9518196 + AT_rich Low_complexity Low_complexity 1 36 0 254 221 32 32 chr20 57149838 57149992 -9518013 + (TATAA)n Simple_repeat Simple_repeat 2 155 0 30 27 0 0 chr20 57149999 57150036 -9517969 + AT_rich Low_complexity Low_complexity 1 37 0 30 27 0 0 chr20 57150059 57150096 -9517909 + AT_rich Low_complexity Low_complexity 1 37 0 271 228 22 50 chr20 57150110 57150290 -9517715 + (TATAA)n Simple_repeat Simple_repeat 1 175 0 235 133 67 15 chr20 57150314 57150449 -9517556 + (TA)n Simple_repeat Simple_repeat 2 143 0 284 178 46 24 chr20 57150444 57150779 -9517226 + (TTATA)n Simple_repeat Simple_repeat 1 342 0 23 0 0 0 chr20 57150779 57150802 -9517203 + AT_rich Low_complexity Low_complexity 1 23 0 218 333 0 24 chr20 57150945 57151071 -9516934 + GA-rich Low_complexity Low_complexity 4 126 0 501 218 35 124 chr20 57151253 57151455 -9516550 + MER5A DNA MER1_type 5 188 -1 924 213 64 35 chr20 57151666 57152015 -9515990 - MSTD LTR MaLR 0 396 1 301 307 138 16 chr20 57152065 57152254 -9515751 + L1M4 LINE L1 5569 5780 -398 206 237 0 0 chr20 57152355 57152393 -9515612 + (CA)n Simple_repeat Simple_repeat 2 39 0 2602 164 41 24 chr20 57152625 57153157 -9514848 - MER21A LTR ERV1 -15 916 376 1263 147 78 4 chr20 57153163 57153408 -9514597 - MER21A LTR ERV1 -668 263 1 182 191 21 0 chr20 57153479 57153526 -9514479 + GA-rich Low_complexity Low_complexity 2 49 0 214 329 13 81 chr20 57154939 57155013 -9512992 + MIR SINE MIR 89 150 -112 2354 103 0 0 chr20 57155013 57155313 -9512692 + AluSg SINE Alu 1 300 -10 214 329 13 81 chr20 57155313 57155387 -9512618 + MIR SINE MIR 150 227 -35 194 301 107 29 chr20 57156121 57156224 -9511781 + L2 LINE L2 2911 3021 -292 1968 78 31 51 chr20 57156231 57156525 -9511480 - AluSg1 SINE Alu -21 288 1 2232 238 67 41 chr20 57157433 57157561 -9510444 - L1ME1 LINE L1 -5 6161 6038 1945 148 62 11 chr20 57157561 57157918 -9510087 + THE1C LTR MaLR 1 375 0 2232 238 67 41 chr20 57157918 57158791 -9509214 - L1ME1 LINE L1 -128 6038 5129 2108 99 11 0 chr20 57158791 57159099 -9508906 - AluSq SINE Alu 0 311 1 237 200 0 33 chr20 57160259 57160319 -9507686 + MLT1F1 LTR MaLR 68 125 -442 1602 208 39 22 chr20 57160319 57160732 -9507273 + L1MD3 LINE L1 7404 7823 -172 362 291 103 47 chr20 57161186 57161399 -9506606 - MIR SINE MIR -6 256 32 227 288 72 24 chr20 57161894 57162019 -9505986 - L3b LINE CR1 -89 1494 1364 424 282 45 128 chr20 57162184 57162252 -9505753 + L2 LINE L2 2926 2998 -274 1750 152 173 14 chr20 57162252 57162621 -9505384 - MSTA LTR MaLR 0 428 1 9455 128 22 40 chr20 57162621 57164226 -9503779 - THE1C-int LTR MaLR 0 1580 4 1832 123 64 59 chr20 57164229 57164602 -9503403 - THE1C LTR MaLR 0 375 1 424 282 45 128 chr20 57164602 57164886 -9503119 + L2 LINE L2 2999 3253 -19 3078 136 18 16 chr20 57164979 57165524 -9502481 + L1MA8 LINE L1 5744 6289 -2 216 0 0 0 chr20 57165580 57165604 -9502401 + (A)n Simple_repeat Simple_repeat 1 24 0 880 209 48 0 chr20 57166430 57166617 -9501388 + MER58A DNA MER1_type 29 224 0 2062 114 4 0 chr20 57166893 57167173 -9500832 + AluSp SINE Alu 1 281 -32 180 97 0 0 chr20 57167176 57167207 -9500798 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 687 269 30 6 chr20 57168088 57168255 -9499750 - MER5B DNA MER1_type -6 172 2 231 234 75 28 chr20 57168324 57168431 -9499574 + MER113 DNA MER1_type? 5 116 -405 2525 52 0 3 chr20 57168809 57169116 -9498889 + AluY SINE Alu 1 306 -5 1240 165 9 28 chr20 57170104 57170316 -9497689 - AluJb SINE Alu -19 293 86 301 348 54 18 chr20 57170491 57170603 -9497402 - L2 LINE L2 -1 3271 3156 763 327 125 12 chr20 57172409 57172913 -9495092 - MLT1K LTR MaLR -5 583 23 21 71 0 0 chr20 57172914 57172956 -9495049 + AT_rich Low_complexity Low_complexity 1 42 0 190 316 13 25 chr20 57173539 57173618 -9494387 - L2 LINE L2 0 3313 3236 199 303 112 0 chr20 57173687 57173776 -9494229 - L2 LINE L2 -1076 2238 2140 235 265 146 69 chr20 57174928 57175188 -9492817 - L3 LINE CR1 -106 1471 1192 3341 75 4 9 chr20 57175189 57175643 -9492362 - L1PA10 LINE L1 -10 6158 5707 191 170 43 21 chr20 57176348 57176395 -9491610 - L2 LINE L2 -5 3267 3220 476 265 127 0 chr20 57176591 57176757 -9491248 - MIR SINE MIR -2 260 74 1515 224 93 50 chr20 57176764 57177268 -9490737 + MLT1H LTR MaLR 3 528 -21 33 43 0 0 chr20 57178291 57178338 -9489667 + AT_rich Low_complexity Low_complexity 1 47 0 249 214 71 18 chr20 57178490 57178546 -9489459 - MER91B DNA MER1_type -126 64 6 412 299 132 10 chr20 57178650 57178854 -9489151 - MIR SINE MIR -13 249 21 527 239 121 72 chr20 57178988 57179293 -9488712 - MER5C DNA MER1_type -2 322 3 183 129 0 0 chr20 57179808 57179839 -9488166 + (T)n Simple_repeat Simple_repeat 1 31 0 233 119 24 0 chr20 57180531 57180573 -9487432 + (CATA)n Simple_repeat Simple_repeat 4 46 0 1590 260 91 10 chr20 57180603 57181184 -9486821 - L1MC4 LINE L1 -193 7849 7222 278 114 0 0 chr20 57182518 57182562 -9485443 + MADE1 DNA Mariner 35 78 -2 462 313 143 31 chr20 57182818 57183144 -9484861 + L2 LINE L2 2727 3087 -226 201 244 0 0 chr20 57183493 57183534 -9484471 + GA-rich Low_complexity Low_complexity 4 44 0 196 306 16 0 chr20 57184257 57184319 -9483686 + MIR SINE MIR 59 121 -87 22 0 0 0 chr20 57184338 57184360 -9483645 + AT_rich Low_complexity Low_complexity 1 22 0 706 271 50 6 chr20 57184441 57184622 -9483383 + MER5A DNA MER1_type 1 189 0 301 244 53 11 chr20 57185453 57185606 -9482399 - MIR SINE MIR -45 217 12 663 307 32 26 chr20 57186035 57186374 -9481631 + MER102b DNA MER1_type 1 341 0 1267 172 19 0 chr20 57186818 57187033 -9480972 - MER20 DNA MER1_type 0 219 1 270 203 0 38 chr20 57187470 57187549 -9480456 + LTR67 LTR ERVL 479 554 -3 39 22 0 0 chr20 57187771 57187817 -9480188 + AT_rich Low_complexity Low_complexity 1 46 0 690 285 44 35 chr20 57189190 57189418 -9478587 + MIR SINE MIR 18 247 -15 297 380 31 0 chr20 57189721 57189850 -9478155 - L2 LINE L2 -8 3264 3132 594 122 0 26 chr20 57189980 57190095 -9477910 + (TCCA)n Simple_repeat Simple_repeat 2 113 0 470 348 67 56 chr20 57190095 57190312 -9477693 - L2 LINE L2 0 3272 3059 2338 119 0 0 chr20 57190312 57190623 -9477382 + AluSx SINE Alu 1 311 -1 470 348 67 56 chr20 57190623 57191072 -9476933 - L2 LINE L2 -213 3059 2596 498 248 66 7 chr20 57191088 57191225 -9476780 + MIR SINE MIR 117 261 -1 4586 102 12 89 chr20 57191330 57192222 -9475783 + L1PB2 LINE L1 5327 6150 -1 278 182 61 30 chr20 57192242 57192308 -9475697 - MIR SINE MIR -184 78 11 405 328 136 18 chr20 57192335 57192673 -9475332 - L1ME4a LINE L1 -210 5911 5534 247 164 229 0 chr20 57192956 57193017 -9474988 + MLT1E2 LTR MaLR 170 244 -382 1391 139 123 83 chr20 57194470 57194901 -9473104 - LTR7 LTR ERV1 -2 448 1 326 145 14 0 chr20 57195014 57195083 -9472922 + MER53 DNA DNA 108 177 -12 * 479 121 12 0 chr20 57195022 57195105 -9472900 - MER53 DNA DNA -105 84 1 275 294 55 9 chr20 57195478 57195587 -9472418 - LTR67 LTR ERVL 0 557 444 2368 101 3 0 chr20 57195619 57195927 -9472078 + AluSg SINE Alu 1 309 -1 42 77 0 0 chr20 57196317 57196408 -9471597 + AT_rich Low_complexity Low_complexity 1 91 0 418 332 50 5 chr20 57197508 57197707 -9470298 + MIR SINE MIR 6 213 -49 1753 170 42 24 chr20 57197736 57198072 -9469933 + MER2 DNA MER2_type 1 342 -2 361 212 42 76 chr20 57198658 57198776 -9469229 - MER5A DNA MER1_type 0 189 76 748 121 21 7 chr20 57199095 57199235 -9468770 + GA-rich Low_complexity Low_complexity 5 146 0 622 243 0 6 chr20 57199334 57199507 -9468498 + L1MD3 LINE L1 7715 7886 -109 724 135 0 23 chr20 57199541 57199674 -9468331 - L1MA4 LINE L1 0 6300 6171 490 338 0 7 chr20 57199834 57199985 -9468020 + MIR SINE MIR 111 260 -2 380 244 52 30 chr20 57199997 57200132 -9467873 + MIR SINE MIR 117 254 -8 858 318 103 12 chr20 57200370 57200877 -9467128 - MLT1K LTR MaLR -8 580 28 266 227 0 100 chr20 57201085 57201195 -9466810 - L2 LINE L2 -1 3312 3214 1885 226 50 13 chr20 57201216 57201783 -9466222 - L1MB7 LINE L1 -10 6174 5584 321 274 42 0 chr20 57202576 57202671 -9465334 - MLT1I LTR MaLR -268 141 43 15685 36 4 11 chr20 57205463 57208179 -9459826 - L1PA3 LINE L1 0 6155 3451 1283 285 185 36 chr20 57208470 57209204 -9458801 + L2 LINE L2 105 993 -2321 2524 119 8 16 chr20 57209204 57209582 -9458423 + THE1C LTR MaLR 1 375 0 1283 285 185 36 chr20 57209582 57209730 -9458275 + L2 LINE L2 993 1118 -2196 629 301 76 90 chr20 57209793 57210024 -9457981 + L2 LINE L2 2831 3064 -249 1320 136 44 4 chr20 57210024 57210252 -9457753 - L1MB5 LINE L1 -8 6166 5930 629 301 76 90 chr20 57210252 57210509 -9457496 + L2 LINE L2 3064 3312 -1 710 170 0 7 chr20 57210703 57210856 -9457149 + (TCCA)n Simple_repeat Simple_repeat 1 152 0 1844 304 49 38 chr20 57210996 57211727 -9456278 - L2 LINE L2 -337 2977 2239 463 275 167 0 chr20 57211779 57212063 -9455942 + L2 LINE L2 2711 3035 -278 7386 63 8 0 chr20 57212063 57213794 -9454211 - L1PA5 LINE L1 0 6154 4414 3845 44 4 0 chr20 57213794 57214296 -9453709 + L1PA5 LINE L1 3914 4417 -1729 262 282 126 39 chr20 57214430 57214533 -9453472 + L2 LINE L2 3201 3312 -1 3730 200 90 4 chr20 57214631 57215597 -9452408 - L1MB7 LINE L1 -1077 5069 4021 251 303 220 0 chr20 57215677 57215786 -9452219 + MIR SINE MIR 29 161 -101 313 244 12 0 chr20 57215788 57215870 -9452135 - LTR33A LTR ERVL -3 520 438 502 281 55 10 chr20 57217127 57217326 -9450679 + MLT1L LTR MaLR 174 381 -234 283 202 61 20 chr20 57217380 57217479 -9450526 + MLT1L LTR MaLR 496 598 -17 2342 64 37 0 chr20 57217798 57218093 -9449912 + AluY SINE Alu 1 306 -5 198 143 0 0 chr20 57218179 57218214 -9449791 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 404 260 65 0 chr20 57218559 57218713 -9449292 + MER103 DNA DNA 1 164 -2 23 0 0 0 chr20 57218871 57218894 -9449111 + AT_rich Low_complexity Low_complexity 1 23 0 190 286 14 43 chr20 57219279 57219349 -9448656 - MIR SINE MIR -157 105 38 21 0 0 0 chr20 57219389 57219410 -9448595 + AT_rich Low_complexity Low_complexity 1 21 0 515 329 20 29 chr20 57220128 57220374 -9447631 - MIR SINE MIR -10 252 9 389 364 22 63 chr20 57220644 57220913 -9447092 - L2 LINE L2 -86 3186 2929 257 0 30 0 chr20 57221079 57221112 -9446893 + (TC)n Simple_repeat Simple_repeat 1 34 0 233 29 29 0 chr20 57221119 57221153 -9446852 + (TG)n Simple_repeat Simple_repeat 2 36 0 335 289 141 13 chr20 57223016 57223165 -9444840 + MIR SINE MIR 94 261 -1 969 146 121 58 chr20 57224391 57224597 -9443408 + MER20 DNA MER1_type 1 219 0 1281 251 141 53 chr20 57224732 57225225 -9442780 - MLT1E LTR MaLR 0 654 1 3031 175 18 28 chr20 57225976 57226052 -9441953 - L1PA16 LINE L1 -114 6052 5977 851 137 15 0 chr20 57226052 57226183 -9441822 - FLAM_C SINE Alu 0 133 1 3031 175 18 28 chr20 57226183 57226706 -9441299 - L1PA16 LINE L1 -189 5977 5459 417 164 0 0 chr20 57226704 57226777 -9441228 + L1 LINE L1 4889 4961 -1185 * 401 271 62 57 chr20 57226795 57226972 -9441033 + MIR SINE MIR 16 193 -69 622 248 43 7 chr20 57227115 57227256 -9440749 + MER45A DNA AcHobo 1 146 -32 2141 158 72 8 chr20 57227276 57227676 -9440329 - MSTB LTR MaLR 0 426 1 2105 111 3 40 chr20 57227689 57228013 -9439992 + AluSx SINE Alu 1 312 0 196 325 58 52 chr20 57228843 57228997 -9439008 + L2 LINE L2 48 202 -3112 1420 158 175 8 chr20 57229286 57229646 -9438359 + LTR37A LTR ERV1 7 426 0 477 196 0 36 chr20 57230128 57230296 -9437709 + (TA)n Simple_repeat Simple_repeat 1 162 0 744 287 66 61 chr20 57230546 57230888 -9437117 + L1ME4a LINE L1 5576 5924 -197 297 0 0 0 chr20 57230888 57230921 -9437084 + (CA)n Simple_repeat Simple_repeat 1 33 0 744 287 66 61 chr20 57230921 57231121 -9436884 + L1ME4a LINE L1 5924 6121 0 351 0 0 0 chr20 57231306 57231345 -9436660 + (T)n Simple_repeat Simple_repeat 1 39 0 183 156 0 0 chr20 57231927 57231959 -9436046 + (CATATA)n Simple_repeat Simple_repeat 5 36 0 393 264 180 25 chr20 57233126 57233365 -9434640 + MER102b DNA MER1_type 41 316 -25 1987 204 90 7 chr20 57233411 57233876 -9434129 - MLT1D LTR MaLR -1 504 1 221 304 146 51 chr20 57234255 57234431 -9433574 - MIR SINE MIR -32 230 42 405 321 85 48 chr20 57235024 57235376 -9432629 + L2 LINE L2 2531 2895 -419 2122 204 36 4 chr20 57235701 57236195 -9431810 - L1M4c LINE L1 -2432 3950 3441 2306 220 37 69 chr20 57236195 57236950 -9431055 - L1M4c LINE L1 -3267 3115 2385 1007 176 86 13 chr20 57236979 57237212 -9430793 - L1MC2 LINE L1 -37 6307 6058 1973 124 49 3 chr20 57237239 57237587 -9430418 - L1MA5 LINE L1 0 6300 5937 1214 257 171 25 chr20 57237591 57238119 -9429886 - L1M4c LINE L1 -4013 2371 1702 2436 88 0 0 chr20 57238119 57238427 -9429578 + AluY SINE Alu 1 308 -3 1214 257 171 25 chr20 57238427 57238642 -9429363 - L1M4c LINE L1 -4682 1702 1520 7012 194 36 13 chr20 57238642 57241064 -9426941 + L1MB1 LINE L1 3690 6168 0 303 283 111 0 chr20 57241074 57241173 -9426832 - MER5B DNA MER1_type -66 112 3 338 292 80 49 chr20 57241785 57242011 -9425994 - L1ME4a LINE L1 -176 5945 5713 241 288 134 42 chr20 57242293 57242599 -9425406 - L1ME4a LINE L1 -2211 5597 5264 1206 91 18 82 chr20 57242854 57243073 -9424932 - AluSq SINE Alu -7 306 102 1859 152 14 20 chr20 57243103 57243400 -9424605 + AluSx SINE Alu 5 299 -13 24 0 0 0 chr20 57243419 57243443 -9424562 + AT_rich Low_complexity Low_complexity 1 24 0 260 191 11 0 chr20 57243921 57244010 -9423995 + (TA)n Simple_repeat Simple_repeat 1 90 0 889 211 127 8 chr20 57244659 57244896 -9423109 - MER58B DNA MER1_type -28 313 49 389 305 109 43 chr20 57245565 57245913 -9422092 - L1ME4a LINE L1 -1310 4836 4466 274 91 0 0 chr20 57246195 57246239 -9421766 + L1PA3 LINE L1 6107 6150 -5 695 290 46 57 chr20 57246251 57246617 -9421388 + L1MC/D LINE L1 5342 5703 -2105 21 36 0 0 chr20 57246652 57246680 -9421325 + AT_rich Low_complexity Low_complexity 1 28 0 16172 29 0 0 chr20 57247064 57249718 -9418287 + L1PA3 LINE L1 3445 6098 -57 1898 175 0 0 chr20 57249722 57250014 -9417991 - AluJb SINE Alu -18 294 3 27 0 0 0 chr20 57250016 57250043 -9417962 + AT_rich Low_complexity Low_complexity 1 27 0 236 257 0 57 chr20 57250191 57250296 -9417709 - HAL1b LINE L1 -943 405 307 1657 181 0 24 chr20 57251425 57251723 -9416282 - AluJo SINE Alu -17 295 5 198 336 19 37 chr20 57251877 57251984 -9416021 - L2 LINE L2 0 3272 3168 2394 90 3 0 chr20 57254105 57254405 -9413600 + AluSg SINE Alu 1 301 -9 389 325 0 9 chr20 57254566 57254680 -9413325 + MIR SINE MIR 1 113 -149 488 138 0 0 chr20 57255293 57255373 -9412632 - L1MA5 LINE L1 0 6300 6221 2277 59 70 0 chr20 57256049 57256336 -9411669 - AluY SINE Alu -2 309 3 498 254 0 8 chr20 57256346 57256464 -9411541 - MER3 DNA MER1_type -63 146 30 31 0 0 0 chr20 57257121 57257152 -9410853 + AT_rich Low_complexity Low_complexity 1 31 0 1929 151 0 3 chr20 57257157 57257441 -9410564 + AluSx SINE Alu 4 286 -26 261 210 0 0 chr20 57257470 57257532 -9410473 + (TG)n Simple_repeat Simple_repeat 2 63 0 241 331 131 15 chr20 57257544 57257674 -9410331 - L2 LINE L2 -27 3286 3142 1735 188 90 49 chr20 57257723 57258133 -9409872 + MLT1D LTR MaLR 20 446 -59 42090 30 33 1 chr20 57258133 57264088 -9403917 + L1HS LINE L1 4 6155 0 237 83 0 0 chr20 57264089 57264125 -9403880 + (A)n Simple_repeat Simple_repeat 1 36 0 430 145 0 0 chr20 57264127 57264196 -9403809 + MLT1D LTR MaLR 435 503 -2 194 328 0 17 chr20 57264197 57264255 -9403750 - L2 LINE L2 -254 3059 3003 12594 196 40 31 chr20 57264260 57267437 -9400568 + L1PA16 LINE L1 1057 4282 -2587 2234 128 128 8 chr20 57267437 57267819 -9400186 - MSTA LTR MaLR 0 428 1 12594 196 40 31 chr20 57267819 57270422 -9397583 + L1PA16 LINE L1 4282 6860 -9 318 309 0 0 chr20 57270430 57270524 -9397481 - L1MC4 LINE L1 -1339 6703 6610 317 258 0 32 chr20 57270442 57270535 -9397470 + L1MC4 LINE L1 6614 6703 -1339 * 194 188 0 21 chr20 57270549 57270597 -9397408 + (TATATG)n Simple_repeat Simple_repeat 5 51 0 1114 288 60 23 chr20 57270597 57271038 -9396967 - L2 LINE L2 -302 3011 2556 315 308 81 56 chr20 57271050 57271248 -9396757 - L2 LINE L2 -609 2705 2503 1129 296 44 35 chr20 57272014 57272446 -9395559 + MLT1K LTR MaLR 2 437 -151 2040 146 0 0 chr20 57274151 57274445 -9393560 - AluSx SINE Alu -13 299 6 421 341 17 17 chr20 57274470 57274643 -9393362 + MIR SINE MIR 10 182 -80 241 300 14 0 chr20 57275168 57275238 -9392767 + L3 LINE CR1 843 913 -664 2111 154 6 26 chr20 57275395 57275739 -9392266 - MER1B DNA MER1_type 0 337 1 249 150 25 0 chr20 57276102 57276142 -9391863 + MER94 DNA DNA 3 43 -91 475 186 0 0 chr20 57276273 57276359 -9391646 + L1MC4a LINE L1 7078 7163 -645 * 902 220 35 18 chr20 57276356 57276583 -9391422 + L1MB7 LINE L1 5935 6165 -19 1355 190 31 37 chr20 57276597 57276949 -9391056 + L1MC4a LINE L1 7146 7495 -313 1164 237 102 28 chr20 57276949 57277380 -9390625 + MLT1C LTR MaLR 1 463 -4 834 238 95 20 chr20 57277384 57277678 -9390327 + L1MC4a LINE L1 7491 7806 -2 1720 171 48 15 chr20 57277680 57278013 -9389992 + MER2 DNA MER2_type 1 344 0 24 0 0 0 chr20 57278019 57278043 -9389962 + AT_rich Low_complexity Low_complexity 1 24 0 558 329 95 5 chr20 57278156 57278378 -9389627 + MIR SINE MIR 15 256 -6 213 39 0 0 chr20 57278603 57278629 -9389376 + (A)n Simple_repeat Simple_repeat 1 26 0 213 348 120 11 chr20 57278632 57278816 -9389189 + L3 LINE CR1 1341 1544 -33 610 269 17 23 chr20 57280192 57280367 -9387638 - MIR SINE MIR -6 256 83 3193 21 0 0 chr20 57280468 57280840 -9387165 - L1PA3 LINE L1 0 6155 5784 301 215 21 11 chr20 57281150 57281243 -9386762 + (CATATA)n Simple_repeat Simple_repeat 2 95 0 949 208 86 84 chr20 57281551 57282003 -9386002 + LTR16A1 LTR ERVL 4 456 -1 339 237 141 66 chr20 57282129 57282327 -9385678 + L1 LINE L1 3625 3837 -2309 22 70 0 0 chr20 57282472 57282515 -9385490 + AT_rich Low_complexity Low_complexity 1 43 0 1260 191 62 67 chr20 57282566 57282953 -9385052 + MLT1B LTR MaLR 6 390 0 228 311 0 0 chr20 57283027 57283101 -9384904 + L1MC/D LINE L1 4536 4609 -1537 241 239 60 15 chr20 57283252 57283319 -9384686 + MIR SINE MIR 161 230 -32 357 275 124 57 chr20 57283328 57283480 -9384525 + L1MC/D LINE L1 4797 4937 -1209 2083 97 10 26 chr20 57283480 57283789 -9384216 + AluY SINE Alu 1 304 -7 357 275 124 57 chr20 57283789 57283916 -9384089 + L1MC/D LINE L1 4937 5092 -1054 262 111 0 0 chr20 57284119 57284155 -9383850 + tRNA-Arg-AGA tRNA tRNA 1 36 -40 2262 114 0 0 chr20 57284273 57284571 -9383434 - AluSg SINE Alu -12 298 1 379 322 32 11 chr20 57284584 57284874 -9383131 + L1MC/D LINE L1 5476 5774 -526 22 0 0 0 chr20 57284924 57284946 -9383059 + AT_rich Low_complexity Low_complexity 1 22 0 683 246 131 20 chr20 57284958 57285157 -9382848 - MER58A DNA MER1_type 0 224 4 21 82 0 0 chr20 57285608 57285657 -9382348 + AT_rich Low_complexity Low_complexity 1 49 0 288 222 0 0 chr20 57286518 57286590 -9381415 + (TA)n Simple_repeat Simple_repeat 2 73 0 390 331 73 63 chr20 57286590 57286737 -9381268 - L2 LINE L2 -4 3309 3165 2866 6 0 0 chr20 57286737 57287048 -9380957 - AluY SINE Alu 0 311 1 390 331 73 63 chr20 57287048 57287202 -9380803 - L2 LINE L2 -148 3165 3005 521 230 15 7 chr20 57287332 57287467 -9380538 + MLT1J2 LTR MaLR 9 144 -306 432 251 42 105 chr20 57287703 57287769 -9380236 - L2 LINE L2 -472 2842 2773 2241 110 7 0 chr20 57287769 57288069 -9379936 + AluSg SINE Alu 1 302 -8 432 251 42 105 chr20 57288069 57288193 -9379812 - L2 LINE L2 -541 2773 2664 514 330 19 19 chr20 57288454 57288696 -9379309 + MIR SINE MIR 17 261 -1 803 182 16 62 chr20 57288911 57289103 -9378902 - MER20 DNA MER1_type -1 218 36 1788 198 56 91 chr20 57289534 57290181 -9377824 - MLT1E3 LTR MaLR 0 624 1 25 0 0 0 chr20 57290730 57290755 -9377250 + AT_rich Low_complexity Low_complexity 1 25 0 1197 310 30 35 chr20 57291322 57291889 -9376116 + MLT1K LTR MaLR 22 585 -3 206 278 0 0 chr20 57291940 57291994 -9376011 + CT-rich Low_complexity Low_complexity 3 56 0 208 320 61 78 chr20 57292480 57292940 -9375065 + L2 LINE L2 2851 3302 -11 2710 74 0 6 chr20 57292940 57293293 -9374712 + L1PA8 LINE L1 5804 6154 -18 218 299 23 0 chr20 57293379 57293466 -9374539 + (TGGA)n Simple_repeat Simple_repeat 1 89 0 2349 104 3 0 chr20 57294103 57294410 -9373595 + AluSq SINE Alu 3 310 -3 331 288 68 34 chr20 57294515 57294633 -9373372 - MER5A DNA MER1_type -2 187 66 1720 153 29 42 chr20 57294634 57294947 -9373058 - AluJo SINE Alu -3 309 1 13833 125 47 9 chr20 57295609 57297719 -9370286 - Tigger1 DNA MER2_type -19 2399 191 1961 138 41 0 chr20 57297719 57298009 -9369996 + AluSx SINE Alu 1 302 -10 13833 125 47 9 chr20 57298009 57298207 -9369798 - Tigger1 DNA MER2_type -2227 191 2 373 306 19 0 chr20 57298416 57298524 -9369481 + MER81 DNA DNA 5 114 0 295 244 24 0 chr20 57298566 57298648 -9369357 - L1ME LINE L1 -312 5809 5726 21 0 0 0 chr20 57298648 57298669 -9369336 + AT_rich Low_complexity Low_complexity 1 21 0 42104 37 1 4 chr20 57298796 57304966 -9363039 - L1PA3 LINE L1 -3 6152 2 330 317 59 72 chr20 57304969 57305259 -9362746 - L1ME LINE L1 -430 5740 5455 748 229 64 0 chr20 57305369 57305587 -9362418 - L1MB7 LINE L1 0 6184 5953 480 209 38 0 chr20 57305625 57305730 -9362275 + MER81 DNA DNA 1 109 -5 562 282 91 27 chr20 57306115 57306335 -9361670 - MIR SINE MIR -10 252 19 629 324 60 69 chr20 57307986 57308515 -9359490 - L2 LINE L2 -4 3268 2737 832 199 24 53 chr20 57308525 57308731 -9359274 + MLT1D LTR MaLR 3 202 -303 728 188 23 134 chr20 57308808 57308984 -9359021 + MLT1D LTR MaLR 194 313 -192 5020 61 2 0 chr20 57308984 57309610 -9358395 + L1PA6 LINE L1 5517 6143 -11 728 188 23 134 chr20 57309610 57309784 -9358221 + MLT1D LTR MaLR 313 505 0 217 356 0 0 chr20 57309843 57309930 -9358075 - L2 LINE L2 -662 2652 2566 838 187 20 0 chr20 57310030 57310180 -9357825 - MER20 DNA MER1_type -58 161 9 1435 175 42 48 chr20 57310938 57311292 -9356713 - L1MB7 LINE L1 -5 6179 5828 1027 85 0 0 chr20 57311293 57311422 -9356583 - AluSg/x SINE Alu -9 303 175 491 146 0 36 chr20 57311424 57311534 -9356471 - L1MB7 LINE L1 -352 5822 5717 382 295 26 58 chr20 57311634 57311790 -9356215 - L2 LINE L2 0 3313 3163 180 317 59 40 chr20 57311801 57311902 -9356103 - L2 LINE L2 0 3313 3211 2031 125 0 48 chr20 57312022 57312334 -9355671 + AluSx SINE Alu 1 297 -15 340 264 154 70 chr20 57312851 57313078 -9354927 + MIR SINE MIR 10 255 -7 429 298 33 13 chr20 57313667 57313818 -9354187 + MIR SINE MIR 11 164 -98 213 189 0 122 chr20 57313911 57313985 -9354020 + L2 LINE L2 3241 3305 -8 3083 116 14 10 chr20 57314093 57314576 -9353429 + L1PB2 LINE L1 5660 6144 -7 1076 303 62 34 chr20 57315187 57315715 -9352290 - MLT1K LTR MaLR -2 586 44 839 241 81 56 chr20 57316004 57316598 -9351407 - L1MC5 LINE L1 -55 7906 7298 362 302 48 16 chr20 57317208 57317334 -9350671 - MIR SINE MIR -76 186 57 3762 114 11 0 chr20 57317367 57317913 -9350092 + MER41A LTR ERV1 1 552 -2 520 207 27 0 chr20 57317942 57318053 -9349952 + MER81 DNA DNA 1 114 0 218 247 62 52 chr20 57319348 57319424 -9348581 - MIR SINE MIR -57 205 126 871 198 85 33 chr20 57319424 57319636 -9348369 + MER58A DNA MER1_type 1 223 -1 218 247 62 52 chr20 57319636 57319656 -9348349 - MIR SINE MIR -136 126 108 1952 197 70 13 chr20 57319775 57320274 -9347731 - LTR27 LTR ERV1 0 501 3 239 313 124 26 chr20 57320869 57321134 -9346871 + L1MC/D LINE L1 5450 5740 -2068 860 130 213 17 chr20 57321740 57321970 -9346035 + MSTA LTR MaLR 1 275 -153 689 62 21 0 chr20 57322049 57322146 -9345859 - MLT2A2 LTR ERVL -354 99 1 324 120 0 0 chr20 57322288 57322338 -9345667 + (CA)n Simple_repeat Simple_repeat 2 51 0 209 246 193 0 chr20 57322655 57322712 -9345293 + L2 LINE L2 3246 3313 0 2795 206 40 44 chr20 57323724 57324212 -9343793 + MER82 DNA MER2_type 1 487 -166 2266 132 0 3 chr20 57324212 57324522 -9343483 + AluSx SINE Alu 1 309 -3 2795 206 40 44 chr20 57324522 57324689 -9343316 + MER82 DNA MER2_type 487 653 0 344 363 38 6 chr20 57324738 57324895 -9343110 - MIR SINE MIR -88 174 13 180 211 0 0 chr20 57325576 57325614 -9342391 - L2 LINE L2 -13 3300 3263 370 307 75 28 chr20 57325792 57325965 -9342040 + MIR SINE MIR 23 196 -66 630 346 10 0 chr20 57326092 57326300 -9341705 - MIR SINE MIR -38 224 15 243 0 0 0 chr20 57326347 57326374 -9341631 + (CAAA)n Simple_repeat Simple_repeat 1 27 0 261 309 154 37 chr20 57326514 57326676 -9341329 - L2 LINE L2 -562 2752 2572 276 381 52 0 chr20 57327426 57327560 -9340445 + MIR SINE MIR 48 188 -74 1038 299 43 45 chr20 57327654 57328139 -9339866 + MLT1K LTR MaLR 95 578 -10 2032 131 3 0 chr20 57328222 57328505 -9339500 + AluSq SINE Alu 1 284 -29 186 71 0 0 chr20 57328505 57328533 -9339472 + (CATA)n Simple_repeat Simple_repeat 2 29 0 228 333 21 58 chr20 57328959 57329106 -9338899 - MIR SINE MIR -65 143 20 5595 66 0 0 chr20 57329318 57330000 -9338005 - LTR8 LTR ERV1 -9 682 1 1238 148 30 43 chr20 57330071 57330357 -9337648 + L1PA16 LINE L1 5854 6130 -1 370 338 46 32 chr20 57330440 57330659 -9337346 + L1MC4a LINE L1 5669 5890 -1918 881 294 126 24 chr20 57331610 57332069 -9335936 + L2 LINE L2 2174 2679 -635 354 349 78 35 chr20 57332253 57332402 -9335603 + L2 LINE L2 2952 3093 -220 2091 115 3 20 chr20 57332402 57332706 -9335299 - AluSc SINE Alu -10 299 1 354 349 78 35 chr20 57332706 57332903 -9335102 + L2 LINE L2 3093 3313 0 198 328 8 88 chr20 57332911 57333036 -9334969 - L2 LINE L2 -18 3295 3181 282 322 103 21 chr20 57334535 57334768 -9333237 - L2 LINE L2 -796 2518 2267 278 260 142 12 chr20 57335110 57335279 -9332726 + MER113 DNA MER1_type? 67 257 -264 2307 142 59 31 chr20 57335322 57335829 -9332176 + MLT2A2 LTR ERVL 3 546 -8 670 207 118 49 chr20 57336159 57336362 -9331643 + MLT1C LTR MaLR 53 269 -198 799 301 61 0 chr20 57336376 57336622 -9331383 + MER113 DNA MER1_type? 261 521 0 1769 193 39 42 chr20 57336971 57337332 -9330673 + MER74A LTR ERVL 121 482 -76 5445 30 0 2 chr20 57337332 57337931 -9330074 - L1PA4 LINE L1 -3 6152 5555 1769 193 39 42 chr20 57337931 57337978 -9330027 + MER74A LTR ERVL 482 528 -30 407 295 38 43 chr20 57338189 57338336 -9329669 + MIR SINE MIR 12 159 -103 1905 216 6 8 chr20 57338336 57338702 -9329303 - MLT1A1 LTR MaLR 0 365 1 407 295 38 43 chr20 57338702 57338764 -9329241 + MIR SINE MIR 159 220 -42 7363 168 13 3 chr20 57338764 57341029 -9326976 - L1PB1 LINE L1 0 6151 3820 196 237 0 0 chr20 57341387 57341425 -9326580 - MIR SINE MIR -219 43 6 2181 158 33 0 chr20 57341601 57341937 -9326068 - MER7A DNA MER2_type 0 346 2 215 209 0 0 chr20 57341981 57342024 -9325981 + (CTATG)n Simple_repeat Simple_repeat 2 44 0 281 281 44 18 chr20 57342354 57342468 -9325537 + L2 LINE L2 2573 2689 -625 2128 116 3 0 chr20 57342504 57342788 -9325217 + AluSx SINE Alu 1 285 -27 311 293 0 10 chr20 57342796 57342882 -9325123 + L1MC4 LINE L1 6609 6695 -1347 2167 109 11 0 chr20 57342882 57343167 -9324838 + AluSx SINE Alu 2 289 -23 311 293 0 10 chr20 57343167 57343179 -9324826 + L1MC4 LINE L1 6695 6706 -1336 324 219 0 0 chr20 57343221 57343390 -9324615 + (TA)n Simple_repeat Simple_repeat 1 169 0 266 170 12 50 chr20 57343491 57343737 -9324268 + (TCTA)n Simple_repeat Simple_repeat 1 236 0 411 174 27 54 chr20 57343751 57343935 -9324070 + (TCTA)n Simple_repeat Simple_repeat 1 179 0 411 174 27 54 chr20 57343949 57344133 -9323872 + (TCTA)n Simple_repeat Simple_repeat 1 179 0 311 212 29 35 chr20 57344080 57344250 -9323755 + (CTAG)n Simple_repeat Simple_repeat 1 169 0 * 299 211 29 53 chr20 57344167 57344338 -9323667 + (TCTA)n Simple_repeat Simple_repeat 4 170 0 * 378 256 43 17 chr20 57344349 57344466 -9323539 - MIR SINE MIR -34 228 109 692 287 64 78 chr20 57344556 57344977 -9323028 - MLT1J LTR MaLR -96 415 1 454 304 231 23 chr20 57345036 57345505 -9322500 + L2 LINE L2 2705 3270 -2 261 79 0 0 chr20 57345850 57345862 -9322143 + (GGA)n Simple_repeat Simple_repeat 3 14 -26 2238 57 47 7 chr20 57345862 57346158 -9321847 + AluY SINE Alu 1 308 -3 261 79 0 0 chr20 57346158 57346183 -9321822 + (GGA)n Simple_repeat Simple_repeat 13 40 0 1878 238 45 43 chr20 57346742 57347254 -9320751 + LTR40a LTR ERVL 7 519 0 646 262 14 0 chr20 57347790 57347931 -9320074 + MER58A DNA MER1_type 30 172 -52 505 313 174 26 chr20 57347934 57348314 -9319691 + L2 LINE L2 2878 3313 0 256 326 12 0 chr20 57348317 57348403 -9319602 + L2 LINE L2 3227 3313 0 288 333 0 0 chr20 57348404 57348476 -9319529 + polypurine Low_complexity Low_complexity 4 75 0 1618 119 68 0 chr20 57348927 57349047 -9318958 + AluSg SINE Alu 1 111 -199 302 0 26 0 chr20 57349047 57349085 -9318920 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1618 119 68 0 chr20 57349085 57349199 -9318806 + AluSg SINE Alu 111 251 -59 518 258 86 27 chr20 57349231 57349417 -9318588 + MIR SINE MIR 56 252 -10 621 231 118 20 chr20 57349501 57349696 -9318309 - MIR SINE MIR -24 238 25 647 226 13 32 chr20 57351459 57351614 -9316391 - L2 LINE L2 0 3313 3162 209 325 125 0 chr20 57351636 57351716 -9316289 - MER91B DNA MER1_type 0 190 101 * 285 273 169 39 chr20 57351683 57351837 -9316168 - MER91A DNA MER1_type -15 181 8 376 246 102 70 chr20 57351852 57351952 -9316053 - L2 LINE L2 -254 3059 2964 920 27 75 129 chr20 57351952 57352099 -9315906 + MER85 DNA T2_type 1 139 0 376 246 102 70 chr20 57352099 57352185 -9315820 - L2 LINE L2 -349 2964 2867 468 302 121 53 chr20 57352391 57352704 -9315301 - L2 LINE L2 -4 3309 3019 1930 215 13 15 chr20 57352704 57353100 -9314905 - MSTD LTR MaLR -1 395 1 468 302 121 53 chr20 57353100 57353333 -9314672 - L2 LINE L2 -294 3019 2714 1184 146 59 43 chr20 57353370 57353545 -9314460 - MER119 DNA MER1_type 0 583 401 773 178 16 23 chr20 57353545 57353674 -9314331 - FLAM_C SINE Alu -5 128 1 1184 146 59 43 chr20 57353674 57353751 -9314254 - MER119 DNA MER1_type -182 401 327 278 253 51 25 chr20 57353766 57353845 -9314160 - MER119 DNA MER1_type -501 82 2 210 330 55 11 chr20 57354607 57354698 -9313307 - MIR3 SINE MIR -112 96 2 288 298 142 28 chr20 57355017 57355158 -9312847 + MIR3 SINE MIR 11 167 -41 396 320 171 6 chr20 57355327 57355502 -9312503 + MIR SINE MIR 44 247 -15 545 276 16 0 chr20 57355702 57355829 -9312176 - MER94 DNA DNA -3 131 3 201 311 16 0 chr20 57356102 57356163 -9311842 + CT-rich Low_complexity Low_complexity 2 63 0 201 343 58 29 chr20 57356736 57356908 -9311097 - L2 LINE L2 -557 2757 2581 749 236 132 0 chr20 57357102 57357322 -9310683 - MIR SINE MIR 0 262 14 180 0 0 0 chr20 57357594 57357614 -9310391 + (T)n Simple_repeat Simple_repeat 1 20 0 407 209 20 85 chr20 57358301 57358454 -9309551 - L2 LINE L2 0 3313 3171 378 318 24 0 chr20 57358864 57358990 -9309015 + MLT1K LTR MaLR 456 584 -4 2305 135 22 19 chr20 57359194 57359508 -9308497 + THE1B LTR MaLR 1 318 -46 2298 143 31 17 chr20 57359508 57359866 -9308139 + THE1B LTR MaLR 2 364 0 2305 135 22 19 chr20 57359866 57359914 -9308091 + THE1B LTR MaLR 318 364 0 488 273 25 31 chr20 57360299 57360460 -9307545 - MLT1H LTR MaLR -387 162 3 628 270 226 48 chr20 57360789 57361204 -9306801 - LTR33 LTR ERVL -28 493 5 24 67 0 0 chr20 57361664 57361709 -9306296 + AT_rich Low_complexity Low_complexity 1 45 0 333 113 16 32 chr20 57361724 57361786 -9306219 + MLT1I LTR MaLR 343 403 -6 218 317 109 0 chr20 57361856 57361957 -9306048 - L2 LINE L2 -2 3311 3200 1455 203 227 48 chr20 57362005 57362113 -9305892 + MLT1E LTR MaLR 1 88 -505 2148 116 0 3 chr20 57362113 57362407 -9305598 - AluSg SINE Alu -17 293 1 1455 203 227 48 chr20 57362407 57362801 -9305204 + MLT1E LTR MaLR 88 593 0 613 269 23 59 chr20 57362805 57363024 -9304981 - MIR SINE MIR -36 226 16 201 239 0 0 chr20 57363053 57363099 -9304906 + L2 LINE L2 2715 2760 -554 731 248 48 9 chr20 57363179 57363389 -9304616 - MIR SINE MIR -43 219 2 212 303 67 34 chr20 57364105 57364224 -9303781 - MIR SINE MIR -32 230 108 416 333 58 33 chr20 57364875 57365118 -9302887 - MIR SINE MIR 0 262 14 25 75 0 0 chr20 57365245 57365298 -9302707 + AT_rich Low_complexity Low_complexity 1 53 0 345 270 27 27 chr20 57365381 57365492 -9302513 - L1MC4 LINE L1 -1317 6725 6615 619 221 15 14 chr20 57365499 57365779 -9302226 + (CATATA)n Simple_repeat Simple_repeat 1 280 0 245 294 0 43 chr20 57365780 57365872 -9302133 + L1MC4 LINE L1 6615 6702 -1340 356 263 17 0 chr20 57365875 57365993 -9302012 + (TATATG)n Simple_repeat Simple_repeat 2 121 0 234 241 0 0 chr20 57365998 57366052 -9301953 - L1MC4 LINE L1 -1340 6702 6649 270 240 0 62 chr20 57366065 57366161 -9301844 - L1MC4 LINE L1 -1339 6703 6614 * 395 254 27 49 chr20 57366145 57366330 -9301675 + L1MC5 LINE L1 7731 7911 -50 3312 189 94 0 chr20 57366693 57367329 -9300676 - L1MB5 LINE L1 -1 6173 5478 2123 134 0 3 chr20 57367365 57367657 -9300348 + AluSx SINE Alu 1 291 -21 233 310 147 17 chr20 57367685 57367801 -9300204 + L2 LINE L2 3137 3267 -5 594 251 97 37 chr20 57367930 57368188 -9299817 + L2 LINE L2 2743 3002 -311 295 221 29 15 chr20 57368456 57368524 -9299481 - L2 LINE L2 -50 3263 3195 195 42 0 0 chr20 57368774 57368798 -9299207 + (TCCC)n Simple_repeat Simple_repeat 3 26 0 361 279 49 8 chr20 57369137 57369259 -9298746 + MIR SINE MIR 66 192 -70 386 323 88 37 chr20 57369295 57369589 -9298416 - L2 LINE L2 -2 3311 3003 539 181 0 29 chr20 57369656 57369761 -9298244 - MER81 DNA DNA -9 105 4 443 316 121 23 chr20 57369766 57370073 -9297932 - L2 LINE L2 -356 2958 2622 25 0 0 0 chr20 57370327 57370352 -9297653 + AT_rich Low_complexity Low_complexity 1 25 0 685 50 0 0 chr20 57370789 57370869 -9297136 + AluY SINE Alu 2 81 -229 275 313 22 107 chr20 57370878 57371150 -9296855 + L2 LINE L2 3022 3270 -2 1488 169 139 8 chr20 57371224 57371491 -9296514 - AluJb SINE Alu 0 302 1 236 329 47 0 chr20 57371575 57371660 -9296345 - MIR SINE MIR -159 103 15 239 192 219 0 chr20 57371967 57372040 -9295965 + MER96 DNA MER1_type? 4 92 -83 3858 180 22 36 chr20 57372111 57372896 -9295109 + LTR39 LTR ERV1 1 774 -9 812 211 7 0 chr20 57373448 57373595 -9294410 + MLT1B LTR MaLR 231 378 -12 196 327 19 0 chr20 57374107 57374159 -9293846 + L2 LINE L2 3171 3223 -49 2258 125 0 6 chr20 57374161 57374472 -9293533 - AluSx SINE Alu -3 309 1 385 275 51 14 chr20 57374646 57374784 -9293221 + MIR SINE MIR 118 260 -2 841 324 103 22 chr20 57375140 57375634 -9292371 + MLT1K LTR MaLR 38 571 -17 429 20 0 0 chr20 57376434 57376484 -9291521 + (CA)n Simple_repeat Simple_repeat 2 51 0 447 78 0 0 chr20 57376484 57376548 -9291457 + (TC)n Simple_repeat Simple_repeat 1 64 0 240 309 0 0 chr20 57377148 57377216 -9290789 + (CA)n Simple_repeat Simple_repeat 1 68 0 284 184 0 0 chr20 57377327 57377376 -9290629 + L2 LINE L2 3170 3218 -54 24 32 0 0 chr20 57377992 57378023 -9289982 + AT_rich Low_complexity Low_complexity 1 31 0 1767 166 27 10 chr20 57378002 57378298 -9289707 - AluJo SINE Alu -11 301 1 1428 246 80 61 chr20 57378445 57378633 -9289372 + MLT1E LTR MaLR 22 205 -388 2928 98 19 5 chr20 57378633 57379061 -9288944 - L1PB2 LINE L1 -1 6150 5717 1428 246 80 61 chr20 57379061 57379433 -9288572 + MLT1E LTR MaLR 205 593 0 673 301 118 39 chr20 57380072 57380487 -9287518 + LTR16A LTR ERVL 3 450 0 261 340 0 19 chr20 57380668 57380771 -9287234 + MER5A DNA MER1_type 9 109 -80 1575 135 39 120 chr20 57380792 57381200 -9286805 + THE1C LTR MaLR 1 375 0 2448 80 0 0 chr20 57382110 57382421 -9285584 + AluY SINE Alu 1 311 0 290 286 71 32 chr20 57382430 57382584 -9285421 - MLT1I LTR MaLR -6 403 244 305 234 0 16 chr20 57382727 57382791 -9285214 - MLT1I LTR MaLR -344 65 3 1771 177 197 16 chr20 57382916 57383352 -9284653 + MLT2B2 LTR ERVL 1 515 0 1830 260 149 27 chr20 57383948 57385118 -9282887 + L1MC4 LINE L1 6438 7715 -93 379 273 46 77 chr20 57386513 57386707 -9281298 + MER5A DNA MER1_type 2 189 0 766 145 32 8 chr20 57386722 57386846 -9281159 - AluJo SINE Alu -177 135 9 300 281 79 0 chr20 57388112 57388201 -9279804 - MER91B DNA MER1_type -5 185 90 344 248 103 17 chr20 57388216 57388333 -9279672 - MER91B DNA MER1_type -63 127 1 2269 104 3 0 chr20 57390015 57390313 -9277692 - AluSp SINE Alu -14 299 1 209 33 33 0 chr20 57390915 57390945 -9277060 + (CA)n Simple_repeat Simple_repeat 1 31 0 287 255 39 49 chr20 57391580 57391682 -9276323 - MER5A DNA MER1_type -80 109 9 236 229 16 0 chr20 57391720 57391781 -9276224 + MER5A DNA MER1_type 9 70 -119 1249 14 14 0 chr20 57391785 57391927 -9276078 - L1PA5 LINE L1 -186 5968 5825 1390 36 6 0 chr20 57391927 57392093 -9275912 + L1PA5 LINE L1 5986 6154 0 238 276 255 0 chr20 57392096 57392194 -9275811 + MER5A DNA MER1_type 61 183 -6 1564 162 49 4 chr20 57392825 57393090 -9274915 + AluJb SINE Alu 24 300 -12 243 88 0 0 chr20 57393151 57393185 -9274820 + (A)n Simple_repeat Simple_repeat 1 34 0 373 240 24 15 chr20 57393761 57393887 -9274118 - MIR SINE MIR -55 153 23 2573 56 0 3 chr20 57393919 57394224 -9273781 - AluY SINE Alu -7 304 1 1224 206 98 40 chr20 57394695 57395020 -9272985 + MER2 DNA MER2_type 1 344 0 244 209 23 12 chr20 57395841 57395927 -9272078 + GA-rich Low_complexity Low_complexity 4 90 0 1734 183 3 38 chr20 57397901 57398218 -9269787 + AluJo SINE Alu 1 306 -6 24 53 0 0 chr20 57399418 57399456 -9268549 + AT_rich Low_complexity Low_complexity 1 38 0 296 161 16 0 chr20 57399504 57399566 -9268439 + CT-rich Low_complexity Low_complexity 3 65 0 24 0 0 0 chr20 57403084 57403108 -9264897 + AT_rich Low_complexity Low_complexity 1 24 0 252 0 0 0 chr20 57404279 57404307 -9263698 + (TAAAAA)n Simple_repeat Simple_repeat 2 29 0 557 144 0 11 chr20 57405054 57405144 -9262861 - FLAM_A SINE Alu -34 108 20 252 0 0 0 chr20 57405534 57405562 -9262443 + (A)n Simple_repeat Simple_repeat 1 28 0 5280 31 5 0 chr20 57407354 57407968 -9260037 + L1PA4 LINE L1 5538 6154 -1 1004 97 0 32 chr20 57408696 57408882 -9259123 + (TC)n Simple_repeat Simple_repeat 1 180 0 2458 68 0 3 chr20 57409446 57409741 -9258264 - AluY SINE Alu -17 294 1 22 0 0 0 chr20 57409744 57409766 -9258239 + AT_rich Low_complexity Low_complexity 1 22 0 342 311 84 26 chr20 57410399 57410589 -9257416 + MIR SINE MIR 62 262 0 222 37 0 0 chr20 57411623 57411650 -9256355 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 188 242 61 15 chr20 57411678 57411744 -9256261 - MIR SINE MIR -70 192 124 33 66 0 0 chr20 57412079 57412140 -9255865 + AT_rich Low_complexity Low_complexity 1 61 0 196 233 33 33 chr20 57412311 57412371 -9255634 + L2 LINE L2 3213 3272 0 182 91 30 0 chr20 57413177 57413210 -9254795 + T-rich Low_complexity Low_complexity 2 35 0 852 316 55 33 chr20 57413365 57413907 -9254098 + LTR67 LTR ERVL 2 555 -2 392 291 146 6 chr20 57414007 57414172 -9253833 - Charlie8 DNA MER1_type -2228 189 2 2147 135 3 0 chr20 57414268 57414565 -9253440 - AluSx SINE Alu -14 298 1 2364 123 43 3 chr20 57414596 57414946 -9253059 - THE1B LTR MaLR 0 364 1 374 252 57 117 chr20 57415184 57415414 -9252591 - LTR67 LTR ERVL -328 229 14 2405 88 0 0 chr20 57415606 57415900 -9252105 + AluSx SINE Alu 1 294 -18 245 272 101 0 chr20 57416006 57416134 -9251871 + MER5A DNA MER1_type 1 145 -33 278 330 53 21 chr20 57416533 57416721 -9251284 + MLT1K LTR MaLR 378 571 -17 231 88 0 0 chr20 57417492 57417526 -9250479 + (CA)n Simple_repeat Simple_repeat 2 35 0 372 330 89 51 chr20 57418016 57418715 -9249290 + L2 LINE L2 2550 3272 0 2094 100 0 0 chr20 57419356 57419617 -9248388 - AluSq SINE Alu -52 261 1 186 319 126 33 chr20 57421151 57421421 -9246584 + L2 LINE L2 2648 2942 -372 730 215 12 12 chr20 57421490 57421662 -9246343 + MER3 DNA MER1_type 5 129 -80 5154 118 14 4 chr20 57421666 57422434 -9245571 + L1PA13 LINE L1 5388 6163 0 2212 109 0 0 chr20 57422434 57422719 -9245286 + AluSx SINE Alu 1 285 -27 1353 52 0 0 chr20 57422844 57422998 -9245007 - AluY SINE Alu -11 300 147 263 258 18 90 chr20 57423003 57423170 -9244835 + L2 LINE L2 3129 3283 -30 204 97 0 0 chr20 57423181 57423212 -9244793 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 181 286 54 0 chr20 57423220 57423276 -9244729 + MIR SINE MIR 82 140 -68 409 257 292 0 chr20 57424118 57424320 -9243685 + MIR SINE MIR 1 261 -1 347 320 40 13 chr20 57424588 57424813 -9243192 - MIR SINE MIR 0 262 32 1442 338 64 19 chr20 57425228 57426088 -9241917 - ERVL LTR ERVL -1112 4652 3754 887 329 32 3 chr20 57426364 57426708 -9241297 - ERVL LTR ERVL -2335 3429 3076 349 341 114 9 chr20 57426708 57426928 -9241077 - LTR16A1 LTR ERVL -214 243 1 2121 121 3 16 chr20 57427324 57427631 -9240374 - AluSx SINE Alu -9 303 1 1359 286 78 25 chr20 57427962 57428475 -9239530 - MLT1H LTR MaLR 0 549 10 450 271 112 21 chr20 57428500 57428688 -9239317 + MIR SINE MIR 58 262 0 23 33 0 0 chr20 57429374 57429404 -9238601 + AT_rich Low_complexity Low_complexity 1 30 0 2504 244 60 28 chr20 57429491 57429525 -9238480 + L1MC4a LINE L1 3368 3399 -2747 1986 146 11 0 chr20 57429525 57429812 -9238193 - AluSx SINE Alu -22 290 1 2504 244 60 28 chr20 57429812 57430813 -9237192 + L1MC4a LINE L1 3399 4436 -1710 524 162 0 10 chr20 57430858 57430957 -9237048 - MLT1A1 LTR MaLR 0 374 277 807 220 45 136 chr20 57430957 57431606 -9236399 - LTR4 LTR ERV1 0 596 7 1090 222 7 36 chr20 57431628 57431903 -9236102 - MLT1A1 LTR MaLR -95 270 4 1384 195 43 0 chr20 57431907 57432230 -9235775 + L1MC4a LINE L1 4530 4866 -1280 266 297 39 45 chr20 57432233 57432388 -9235617 + L1MC4a LINE L1 5430 5583 -538 25 51 0 0 chr20 57432515 57432554 -9235451 + AT_rich Low_complexity Low_complexity 1 39 0 517 259 33 30 chr20 57432737 57433007 -9234998 + L1ME LINE L1 966 1236 -5136 21 36 0 0 chr20 57433132 57433160 -9234845 + AT_rich Low_complexity Low_complexity 1 28 0 1026 126 0 0 chr20 57433175 57433318 -9234687 + AluSg/x SINE Alu 154 296 -16 348 250 10 67 chr20 57433335 57433439 -9234566 + L1ME LINE L1 1123 1220 -5164 342 223 99 9 chr20 57433449 57433660 -9234345 + L1ME LINE L1 1418 1647 -4916 398 312 55 35 chr20 57433663 57433865 -9234140 + L1MC4a LINE L1 5665 5870 -1938 1978 184 127 16 chr20 57434063 57434513 -9233492 - MLT1D LTR MaLR -3 502 3 647 261 133 0 chr20 57435705 57435885 -9232120 + MIR SINE MIR 41 244 -18 269 252 49 93 chr20 57436010 57436236 -9231769 + MARNA DNA Mariner 16 231 -355 387 332 32 11 chr20 57436278 57436465 -9231540 - L2 LINE L2 -5 3308 3118 590 333 73 7 chr20 57436532 57436832 -9231173 - L2 LINE L2 -545 2769 2450 1916 154 6 35 chr20 57437277 57437596 -9230409 + AluSx SINE Alu 1 310 -2 180 326 0 0 chr20 57438458 57438501 -9229504 + L2 LINE L2 3137 3179 -93 348 346 74 0 chr20 57438629 57438791 -9229214 - MIR SINE MIR -9 253 80 499 315 153 0 chr20 57438850 57439053 -9228952 + L2 LINE L2 2856 3089 -224 280 331 124 0 chr20 57439695 57439840 -9228165 - MIR SINE MIR -90 172 10 338 323 44 75 chr20 57440006 57440232 -9227773 - MIR SINE MIR -16 246 28 578 302 59 12 chr20 57440931 57441100 -9226905 - MER5A DNA MER1_type -3 186 10 588 301 31 16 chr20 57441126 57441319 -9226686 + MIR SINE MIR 25 220 -42 29 28 0 0 chr20 57441357 57441393 -9226612 + AT_rich Low_complexity Low_complexity 1 36 0 1052 179 82 88 chr20 57441541 57441881 -9226124 - MER44D DNA MER2_type -1 608 1 441 358 17 6 chr20 57441911 57442084 -9225921 - MIR SINE MIR -70 192 18 1259 274 89 25 chr20 57442576 57443050 -9224955 - MLT1K LTR MaLR 0 588 85 442 288 116 43 chr20 57444143 57444515 -9223490 - MLT1K LTR MaLR -24 564 166 3162 156 9 14 chr20 57444639 57445204 -9222801 + L1PB3 LINE L1 5593 6154 0 1497 202 11 32 chr20 57445450 57445727 -9222278 + AluJo SINE Alu 12 282 -30 414 222 33 85 chr20 57446406 57446444 -9221561 + MER117 DNA MER1_type 27 65 -132 956 196 72 5 chr20 57446444 57446653 -9221352 - MER58A DNA MER1_type -1 223 1 414 222 33 85 chr20 57446653 57446767 -9221238 + MER117 DNA MER1_type 65 171 -26 3566 90 2 38 chr20 57446772 57447055 -9220950 - MER75 DNA T2_type 0 514 257 2195 115 0 10 chr20 57447055 57447367 -9220638 + AluSc SINE Alu 1 309 0 3566 90 2 38 chr20 57447367 57447616 -9220389 - MER75 DNA T2_type -257 257 1 29792 106 18 64 chr20 57448142 57454593 -9213412 + L1PA7 LINE L1 12 6151 -3 906 207 12 0 chr20 57454864 57455033 -9212972 + MER45A DNA AcHobo 1 171 -7 289 120 0 0 chr20 57455137 57455187 -9212818 - Alu SINE Alu -3 298 249 547 300 52 14 chr20 57455409 57455619 -9212386 + MIR SINE MIR 17 234 -28 399 321 5 0 chr20 57455801 57455988 -9212017 + L1ME4a LINE L1 5710 5897 -224 348 295 126 0 chr20 57455998 57456093 -9211912 + L2 LINE L2 3161 3267 -5 194 189 0 19 chr20 57456238 57456291 -9211714 + GA-rich Low_complexity Low_complexity 2 53 0 219 310 96 96 chr20 57456337 57456365 -9211640 + MIR SINE MIR 7 34 -228 2449 63 0 0 chr20 57456365 57456651 -9211354 + AluY SINE Alu 16 301 -10 219 310 96 96 chr20 57456651 57456861 -9211144 + MIR SINE MIR 33 245 -17 434 288 63 24 chr20 57457711 57457916 -9210089 + MLT1J LTR MaLR 225 437 -74 1738 229 25 19 chr20 57457922 57458397 -9209608 - LTR40a LTR ERVL -2 517 40 786 239 69 0 chr20 57458598 57458786 -9209219 + MIR SINE MIR 30 230 -32 244 356 67 12 chr20 57458804 57458937 -9209068 + MIR SINE MIR 4 139 -69 330 247 25 25 chr20 57460131 57460212 -9207793 + L2 LINE L2 2978 3058 -214 810 260 101 24 chr20 57460413 57461102 -9206903 + L1ME1 LINE L1 3225 3980 -2166 4592 72 1 1 chr20 57461108 57461764 -9206241 - L1PA7 LINE L1 -1298 4848 4193 6430 66 14 1 chr20 57461764 57463084 -9204921 + L1PA7 LINE L1 4860 6194 0 1436 190 70 20 chr20 57463098 57463440 -9204565 - MLT1A1 LTR MaLR -2 363 5 3379 254 44 43 chr20 57463442 57465098 -9202907 + L1ME1 LINE L1 3975 5594 -572 3208 38 3 0 chr20 57465098 57465490 -9202515 - L1PA4 LINE L1 0 6155 5763 3379 254 44 43 chr20 57465490 57465914 -9202091 + L1ME1 LINE L1 5594 6016 -150 233 169 102 17 chr20 57465977 57466036 -9201969 - L1ME4a LINE L1 -94 6027 5964 322 265 134 34 chr20 57466049 57466340 -9201665 + L1ME4a LINE L1 5637 5956 -165 249 239 86 86 chr20 57466761 57466878 -9201127 + MIR SINE MIR 90 206 -56 218 320 56 16 chr20 57467186 57467311 -9200694 + MIR SINE MIR 74 203 -59 219 284 11 11 chr20 57467933 57468023 -9199982 - MIR SINE MIR -63 145 81 1727 158 14 4 chr20 57468146 57468424 -9199581 - AluJo SINE Alu -30 282 2 21 0 0 0 chr20 57468434 57468455 -9199550 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr20 57469672 57469699 -9198306 + AT_rich Low_complexity Low_complexity 1 27 0 198 0 0 0 chr20 57469867 57469889 -9198116 + (TC)n Simple_repeat Simple_repeat 2 23 0 1095 172 34 5 chr20 57470132 57470341 -9197664 + MER20 DNA MER1_type 1 215 -4 357 336 0 9 chr20 57470873 57470983 -9197022 - MIR SINE MIR -134 128 20 305 338 50 50 chr20 57471893 57472053 -9195952 + L2 LINE L2 3097 3256 -16 786 243 111 4 chr20 57472683 57472909 -9195096 + LTR40a LTR ERVL 1 250 -269 914 210 55 85 chr20 57472909 57473181 -9194824 + AluJo SINE Alu 1 264 -48 884 234 35 17 chr20 57473209 57473440 -9194565 + LTR40b LTR ERVL 173 407 -55 273 287 61 43 chr20 57473695 57473810 -9194195 + L2 LINE L2 3154 3270 -2 947 271 103 23 chr20 57473854 57474078 -9193927 + L2 LINE L2 2680 2885 -428 2653 123 36 5 chr20 57474078 57474493 -9193512 + MSTA LTR MaLR 1 428 0 947 271 103 23 chr20 57474493 57474782 -9193223 + L2 LINE L2 2885 3313 0 335 306 19 19 chr20 57474783 57474891 -9193114 + GA-rich Low_complexity Low_complexity 5 112 0 21 36 0 0 chr20 57475444 57475472 -9192533 + AT_rich Low_complexity Low_complexity 1 28 0 441 229 223 12 chr20 57476794 57476960 -9191045 + MIR SINE MIR 31 231 -31 1010 243 18 4 chr20 57477383 57477609 -9190396 + MIR SINE MIR 13 241 -21 1204 54 0 0 chr20 57477796 57477945 -9190060 + AluY SINE Alu 163 311 0 3081 212 20 16 chr20 57478039 57479409 -9188596 - L1ME1 LINE L1 -160 6075 4684 5311 124 21 13 chr20 57479409 57480540 -9187465 + L1PA16 LINE L1 5024 6161 -5 3081 212 20 16 chr20 57480540 57480622 -9187383 - L1ME1 LINE L1 -1551 4684 4604 6232 10 0 0 chr20 57480622 57481323 -9186682 - L1PA2 LINE L1 -5 6150 5450 2541 20 0 0 chr20 57481323 57481715 -9186290 + L1PA2 LINE L1 5073 5464 -691 5222 245 66 34 chr20 57481718 57483893 -9184112 - L1ME1 LINE L1 -1606 4609 2365 446 255 0 0 chr20 57483893 57483987 -9184018 + MER82 DNA MER2_type 1 94 -559 294 341 85 8 chr20 57484065 57484194 -9183811 - MIR SINE MIR -123 139 1 797 287 10 5 chr20 57484228 57484430 -9183575 + MER82 DNA MER2_type 447 649 -4 6462 243 79 18 chr20 57484432 57486665 -9181340 - L1ME1 LINE L1 -3992 2404 36 263 274 266 0 chr20 57486860 57486973 -9181032 + MIR SINE MIR 120 262 0 374 356 53 0 chr20 57487327 57487459 -9180546 + MER91B DNA MER1_type 5 143 -47 549 275 72 31 chr20 57487647 57487869 -9180136 + MIR SINE MIR 6 236 -26 273 169 34 17 chr20 57488005 57488064 -9179941 + Charlie5 DNA MER1_type 5 64 -2548 472 289 141 20 chr20 57488204 57488508 -9179497 + L2 LINE L2 2964 3304 -9 252 0 0 0 chr20 57489087 57489115 -9178890 + (CA)n Simple_repeat Simple_repeat 2 29 0 22 0 0 0 chr20 57489305 57489327 -9178678 + AT_rich Low_complexity Low_complexity 1 22 0 32 26 0 0 chr20 57489448 57489487 -9178518 + AT_rich Low_complexity Low_complexity 1 39 0 576 329 43 75 chr20 57490767 57491129 -9176876 - L2 LINE L2 -1 3271 2922 603 282 66 33 chr20 57491129 57491342 -9176663 + MIR SINE MIR 3 222 -40 438 248 8 8 chr20 57491342 57491471 -9176534 - L1ME LINE L1 -297 5824 5696 214 96 19 19 chr20 57491759 57491779 -9176226 + (CA)n Simple_repeat Simple_repeat 2 21 -32 2408 115 25 3 chr20 57491779 57492135 -9175870 - THE1B LTR MaLR 0 364 1 10984 100 19 18 chr20 57492136 57493713 -9174292 - THE1B-int LTR MaLR -1 1579 1 2305 132 25 3 chr20 57493713 57494069 -9173936 - THE1B LTR MaLR 0 364 1 214 96 19 19 chr20 57494069 57494097 -9173908 + (CA)n Simple_repeat Simple_repeat 19 53 0 1644 233 49 14 chr20 57494127 57494613 -9173392 - L1ME1 LINE L1 -21 6145 5643 1518 191 14 25 chr20 57494972 57495254 -9172751 + AluJo SINE Alu 1 279 -33 270 0 0 0 chr20 57495261 57495291 -9172714 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 702 199 31 84 chr20 57495484 57495640 -9172365 + ORSL DNA AcHobo 4 141 -134 1963 159 0 0 chr20 57495640 57495948 -9172057 + AluSx SINE Alu 1 308 0 702 199 31 84 chr20 57495948 57496077 -9171928 + ORSL DNA AcHobo 141 275 0 511 326 11 6 chr20 57496211 57496389 -9171616 - MIR SINE MIR -25 237 59 318 286 95 34 chr20 57496619 57496766 -9171239 + L1ME LINE L1 5267 5422 -699 2239 102 0 23 chr20 57497946 57498249 -9169756 + AluSx SINE Alu 1 296 -16 1111 295 99 21 chr20 57498364 57499061 -9168944 - L2 LINE L2 -19 3294 2545 329 224 31 41 chr20 57499108 57499206 -9168799 - L2 LINE L2 -3150 164 68 272 296 9 0 chr20 57499373 57499481 -9168524 + L1ME LINE L1 5550 5658 -463 267 291 284 8 chr20 57499570 57499697 -9168308 - MIR SINE MIR -12 250 89 781 261 103 0 chr20 57499741 57499944 -9168061 - MER58A DNA MER1_type 0 224 1 552 212 59 41 chr20 57500090 57500260 -9167745 - MLT1J2 LTR MaLR -12 438 266 1017 177 166 11 chr20 57500293 57500558 -9167447 - LOR1a LTR ERV1 0 497 192 284 171 14 0 chr20 57500555 57500625 -9167380 - LOR1a LTR ERV1 -189 308 238 * 425 264 7 20 chr20 57500715 57500854 -9167151 - MLT1J2 LTR MaLR -227 182 48 212 392 49 0 chr20 57501409 57501511 -9166494 + L2 LINE L2 3149 3255 -17 561 252 191 32 chr20 57501741 57502050 -9165955 + MLT1K LTR MaLR 140 497 -91 484 226 62 113 chr20 57502353 57502688 -9165317 + MLT1I LTR MaLR 66 387 -22 257 47 0 0 chr20 57502722 57502765 -9165240 - AluY SINE Alu -1 299 257 1992 134 0 3 chr20 57503284 57503574 -9164431 - AluSx SINE Alu -22 290 2 209 167 95 0 chr20 57504293 57504335 -9163670 + L2 LINE L2 3268 3313 0 9046 40 3 0 chr20 57505400 57506566 -9161439 - L1PA3 LINE L1 -1718 4428 3260 8083 30 0 0 chr20 57506566 57508297 -9159708 + L1PA3 LINE L1 4421 6151 -4 252 149 0 0 chr20 57508308 57508355 -9159650 + (A)n Simple_repeat Simple_repeat 1 47 0 1859 160 38 35 chr20 57508360 57508760 -9159245 + MER95 LTR ERV 18 418 -13 326 183 99 14 chr20 57509365 57509436 -9158569 + MIR SINE MIR 79 155 -107 252 77 0 0 chr20 57509868 57509907 -9158098 + (T)n Simple_repeat Simple_repeat 1 39 0 769 263 137 4 chr20 57511189 57511593 -9156412 + L1MCa LINE L1 21 311 -5596 417 103 15 0 chr20 57511632 57511700 -9156305 + L1MA9 LINE L1 6242 6310 -2 317 202 58 19 chr20 57511760 57511864 -9156141 + L1MCa LINE L1 318 425 -5482 2347 213 102 40 chr20 57511944 57513242 -9154763 + L1MCa LINE L1 425 2061 -4546 2809 123 12 2 chr20 57513242 57513666 -9154339 - MSTA LTR MaLR 0 428 1 2347 213 102 40 chr20 57513666 57513881 -9154124 + L1MCa LINE L1 2061 2261 -4346 1688 137 12 4 chr20 57513892 57514147 -9153858 - AluSg1 SINE Alu -1 308 52 222 254 175 26 chr20 57514168 57514282 -9153723 + L2 LINE L2 3180 3310 -3 334 330 88 61 chr20 57514617 57514787 -9153218 - L2 LINE L2 0 3272 3108 1029 140 17 22 chr20 57514787 57514965 -9153040 + L1PA10 LINE L1 5991 6167 -1 334 330 88 61 chr20 57514965 57515288 -9152717 - L2 LINE L2 -164 3108 2777 4854 164 38 12 chr20 57515336 57515355 -9152650 + L1MC3 LINE L1 6768 6785 -1000 450 110 12 37 chr20 57515355 57515437 -9152568 - MADE1 DNA Mariner 0 80 1 4854 164 38 12 chr20 57515437 57515508 -9152497 + L1MC3 LINE L1 6785 6853 -932 192 40 0 0 chr20 57515508 57515533 -9152472 + (CA)n Simple_repeat Simple_repeat 2 26 0 4854 164 38 12 chr20 57515533 57516420 -9151585 + L1MC3 LINE L1 6853 7771 -14 2032 78 27 0 chr20 57516428 57516684 -9151321 + AluSq SINE Alu 37 299 -14 304 261 61 9 chr20 57516741 57516856 -9151149 - L2 LINE L2 -641 2673 2553 2570 183 32 124 chr20 57517169 57517186 -9150819 + L1MC4a LINE L1 6826 6843 -965 1463 212 35 82 chr20 57517186 57517676 -9150329 - MLT1C LTR MaLR 0 467 1 2570 183 32 124 chr20 57517676 57518196 -9149809 + L1MC4a LINE L1 6843 7409 -399 2003 145 0 3 chr20 57518196 57518492 -9149513 + AluJb SINE Alu 1 295 -17 2570 183 32 124 chr20 57518492 57518924 -9149081 + L1MC4a LINE L1 7409 7606 -202 2391 98 13 0 chr20 57518924 57519230 -9148775 + AluSq SINE Alu 1 310 -3 2570 183 32 124 chr20 57519230 57519416 -9148589 + L1MC4a LINE L1 7606 7808 0 458 330 70 30 chr20 57519452 57519782 -9148223 - L2 LINE L2 -779 2535 2193 260 321 9 19 chr20 57519840 57519946 -9148059 - L2 LINE L2 -1317 1997 1893 194 148 19 130 chr20 57520118 57520145 -9147860 - MIR SINE MIR -112 150 130 1103 260 189 20 chr20 57520145 57520652 -9147353 + MLT1E LTR MaLR 1 593 0 194 148 19 130 chr20 57520652 57520678 -9147327 - MIR SINE MIR -132 130 103 783 243 82 117 chr20 57520683 57521223 -9146782 + LTR33 LTR ERVL 1 521 0 399 228 126 78 chr20 57521357 57521482 -9146523 + MIR SINE MIR 34 174 -88 1888 173 3 0 chr20 57521482 57521771 -9146234 + AluSx SINE Alu 1 290 -22 399 228 126 78 chr20 57521771 57521851 -9146154 + MIR SINE MIR 174 249 -13 1039 235 104 10 chr20 57522647 57523051 -9144954 + MER113 DNA MER1_type? 7 448 -73 546 335 98 24 chr20 57523471 57523808 -9144197 - L2 LINE L2 -20 3293 2932 287 269 26 39 chr20 57523824 57523902 -9144103 - MIR SINE MIR -160 102 26 1235 296 116 7 chr20 57523903 57524481 -9143524 - L2 LINE L2 -391 2923 2283 617 251 56 34 chr20 57524785 57524964 -9143041 - MIR SINE MIR -79 183 1 2151 143 14 27 chr20 57525032 57525402 -9142603 + MLT1A1 LTR MaLR 1 365 0 528 313 76 24 chr20 57525600 57525811 -9142194 + MIR SINE MIR 21 242 -20 269 250 66 13 chr20 57526308 57526384 -9141621 - L2 LINE L2 -1 3271 3192 305 192 14 14 chr20 57526479 57526552 -9141453 + MER97c DNA MER1_type? 15 87 -1003 207 259 78 60 chr20 57526715 57526831 -9141174 - L2 LINE L2 -225 3047 2930 266 261 26 43 chr20 57526861 57526976 -9141029 - MER102b DNA MER1_type -25 316 204 640 337 12 4 chr20 57527508 57527754 -9140251 - MIR SINE MIR -12 250 3 552 278 54 34 chr20 57528649 57528854 -9139151 - MIR SINE MIR -8 254 46 318 50 0 0 chr20 57528927 57528967 -9139038 + (CAT)n Simple_repeat Simple_repeat 2 41 0 212 269 67 82 chr20 57528996 57529130 -9138875 - MIR SINE MIR -28 234 103 5320 129 30 8 chr20 57529130 57530445 -9137560 + L1PA16 LINE L1 4822 6166 0 262 211 77 0 chr20 57531179 57531231 -9136774 + AluJo SINE Alu 8 63 -239 2328 121 30 30 chr20 57531231 57531595 -9136410 + THE1B LTR MaLR 1 364 0 1498 145 0 40 chr20 57531595 57531843 -9136162 + AluJo SINE Alu 59 296 -16 520 308 114 9 chr20 57534208 57534419 -9133586 + MIR SINE MIR 17 249 -13 22 0 0 0 chr20 57535369 57535391 -9132614 + AT_rich Low_complexity Low_complexity 1 22 0 2185 78 3 3 chr20 57535408 57535690 -9132315 - L1PA7 LINE L1 -5 6149 5868 3312 214 81 11 chr20 57536079 57537257 -9130748 - L1ME1 LINE L1 -5 6161 4899 217 198 35 58 chr20 57538215 57538301 -9129704 + L3 LINE CR1 1180 1263 -314 497 276 116 18 chr20 57538784 57539009 -9128996 - MIR SINE MIR -15 247 1 566 260 26 2 chr20 57539606 57539796 -9128209 - MIR SINE MIR -10 252 20 1310 215 5 0 chr20 57539809 57540032 -9127973 + MER58A DNA MER1_type 1 224 0 1776 179 61 165 chr20 57540190 57540994 -9127011 - LTR8A LTR ERV1 -7 720 1 407 307 100 0 chr20 57542076 57542226 -9125779 - MIR SINE MIR -48 214 50 501 306 69 8 chr20 57542861 57543106 -9124899 - MIR SINE MIR 0 262 3 587 236 64 0 chr20 57543109 57543266 -9124739 - MER58A DNA MER1_type -4 220 54 819 232 76 0 chr20 57543266 57543490 -9124515 - L1MA4 LINE L1 -12 6288 6048 379 260 0 0 chr20 57543492 57543565 -9124440 - MER58A DNA MER1_type -34 73 1 333 274 34 34 chr20 57543773 57543890 -9124115 - MLT1K LTR MaLR -34 554 438 2498 76 7 0 chr20 57543950 57544254 -9123751 - AluSq SINE Alu -7 306 1 748 262 6 22 chr20 57544360 57544543 -9123462 + MLT1K LTR MaLR 352 531 -57 1478 140 42 132 chr20 57544777 57544811 -9123194 - L1MC1 LINE L1 -4 6329 6294 1739 150 185 19 chr20 57544811 57545178 -9122827 + MSTA LTR MaLR 1 428 0 1478 140 42 132 chr20 57545178 57545522 -9122483 - L1MC1 LINE L1 -39 6294 5985 335 234 58 80 chr20 57546659 57546796 -9121209 - L2 LINE L2 -1 3312 3179 225 0 0 0 chr20 57547191 57547216 -9120789 + (CA)n Simple_repeat Simple_repeat 2 26 0 391 278 44 61 chr20 57547808 57547988 -9120017 + MIR SINE MIR 31 207 -55 460 259 189 0 chr20 57548049 57548234 -9119771 - MIR SINE MIR -35 227 8 395 223 17 6 chr20 57548857 57549032 -9118973 + GA-rich Low_complexity Low_complexity 2 178 0 317 203 0 0 chr20 57549232 57549296 -9118709 + Charlie8 DNA MER1_type 109 172 -2245 1174 148 5 26 chr20 57549296 57549485 -9118520 + AluJo SINE Alu 3 187 -125 742 259 79 53 chr20 57549507 57549847 -9118158 + Charlie8 DNA MER1_type 143 491 -1926 300 226 110 96 chr20 57550434 57550580 -9117425 - LTR67 LTR ERVL 0 557 410 1072 185 23 9 chr20 57550763 57550979 -9117026 - MER20 DNA MER1_type 0 219 1 1791 165 39 28 chr20 57551604 57551967 -9116038 - THE1C LTR MaLR 0 375 9 212 175 0 0 chr20 57552078 57552118 -9115887 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 888 248 52 9 chr20 57553381 57553591 -9114414 - MER58A DNA MER1_type 0 224 6 2054 170 28 57 chr20 57553710 57554134 -9113871 - MER54A LTR ERVL 0 901 490 509 202 0 6 chr20 57554143 57554311 -9113694 + CT-rich Low_complexity Low_complexity 2 168 0 714 167 0 0 chr20 57554359 57554539 -9113466 + CT-rich Low_complexity Low_complexity 1 180 0 1155 173 95 39 chr20 57554544 57554828 -9113177 - MER73 LTR ERVL -344 300 1 2045 125 0 3 chr20 57555311 57555599 -9112406 + AluSx SINE Alu 13 299 -13 982 233 43 5 chr20 57557104 57557314 -9110691 + MER58A DNA MER1_type 7 224 0 383 270 8 22 chr20 57557786 57557929 -9110076 - MIR SINE MIR -63 145 49 24 0 0 0 chr20 57558074 57558098 -9109907 + AT_rich Low_complexity Low_complexity 1 24 0 254 257 73 46 chr20 57558735 57558844 -9109161 + LTR67 LTR ERVL 429 540 -17 519 268 107 51 chr20 57559513 57559980 -9108025 + L2 LINE L2 2739 3222 -91 279 310 0 0 chr20 57560019 57560090 -9107915 + GA-rich Low_complexity Low_complexity 1 71 0 446 253 37 56 chr20 57560211 57560262 -9107743 - MER69 DNA AcHobo 0 2526 2476 2245 93 0 40 chr20 57560262 57560586 -9107419 + AluSp SINE Alu 2 312 -1 446 253 37 56 chr20 57560586 57560696 -9107309 - MER69 DNA AcHobo -50 2476 2368 367 259 70 93 chr20 57561433 57561703 -9106302 + L1MC4a LINE L1 5425 5688 -2120 490 309 57 25 chr20 57561754 57562071 -9105934 + L1MC4a LINE L1 5695 6021 -1787 309 336 79 35 chr20 57562426 57562655 -9105350 + MLT1K LTR MaLR 7 245 -343 666 83 0 0 chr20 57562730 57562826 -9105179 + AluY SINE Alu 214 309 -2 693 242 111 45 chr20 57562831 57563075 -9104930 + MLT1K LTR MaLR 327 586 -2 427 311 46 13 chr20 57563527 57563678 -9104327 + MIR SINE MIR 28 183 -79 972 243 71 58 chr20 57563724 57564253 -9103752 + MER39 LTR ERV1 5 707 0 24 53 0 0 chr20 57564426 57564464 -9103541 + AT_rich Low_complexity Low_complexity 1 38 0 244 337 34 0 chr20 57564474 57564563 -9103442 - L2 LINE L2 -54 3259 3168 294 281 68 68 chr20 57564651 57565006 -9102999 - LTR16A1 LTR ERVL -52 405 73 3091 112 25 7 chr20 57565073 57565512 -9102493 + MER1A DNA MER1_type 57 503 -26 197 227 0 0 chr20 57565597 57565641 -9102364 - L2 LINE L2 -253 3060 3017 1179 161 9 14 chr20 57566179 57566396 -9101609 + MER20 DNA MER1_type 1 216 -3 234 191 0 0 chr20 57566644 57566691 -9101314 + CT-rich Low_complexity Low_complexity 3 49 0 596 293 117 20 chr20 57566766 57567015 -9100990 - MLT1K LTR MaLR -259 329 57 390 292 222 9 chr20 57567104 57567320 -9100685 + MIR SINE MIR 1 262 0 252 306 52 37 chr20 57567402 57567536 -9100469 - MIR SINE MIR -57 151 16 567 219 40 126 chr20 57568273 57568380 -9099625 - MIR SINE MIR -2 260 145 2339 89 3 0 chr20 57568380 57568671 -9099334 - AluSg SINE Alu -17 293 2 567 219 40 126 chr20 57568671 57568698 -9099307 - MIR SINE MIR -117 145 117 2678 103 11 0 chr20 57568698 57569058 -9098947 + THE1B LTR MaLR 1 364 0 567 219 40 126 chr20 57569058 57569200 -9098805 - MIR SINE MIR -145 117 7 305 301 21 28 chr20 57569524 57569667 -9098338 + MIR SINE MIR 47 188 -74 518 333 16 12 chr20 57570133 57570388 -9097617 - MIR SINE MIR 0 262 7 2531 58 3 3 chr20 57570686 57570997 -9097008 + AluY SINE Alu 1 311 0 3009 96 5 42 chr20 57571084 57571532 -9096473 + MER57B LTR ERV1 1 431 -3 785 290 18 33 chr20 57571597 57571869 -9096136 - MLT1K LTR MaLR -194 394 127 636 296 9 24 chr20 57572905 57573118 -9094887 + MIR SINE MIR 40 249 -13 298 307 51 15 chr20 57573402 57573539 -9094466 - MLT1I LTR MaLR -267 142 1 1587 169 62 62 chr20 57573616 57573745 -9094260 + MLT1B LTR MaLR 1 129 -261 2055 128 51 34 chr20 57573745 57574098 -9093907 + THE1B LTR MaLR 5 363 -1 1587 169 62 62 chr20 57574098 57574358 -9093647 + MLT1B LTR MaLR 128 390 0 376 286 39 39 chr20 57574548 57574730 -9093275 - MIR SINE MIR -1 261 80 271 225 63 81 chr20 57574972 57575187 -9092818 - MIR SINE MIR -2 260 10 2167 126 3 0 chr20 57576317 57576618 -9091387 + AluSx SINE Alu 1 302 -10 1914 69 58 31 chr20 57578131 57578391 -9089614 - AluY SINE Alu -9 302 36 1323 265 137 32 chr20 57578746 57579398 -9088607 + L1ME3A LINE L1 5446 6165 -5 2127 130 3 0 chr20 57579706 57579998 -9088007 - AluJb SINE Alu -19 293 1 331 246 74 34 chr20 57580470 57580645 -9087360 + L1MC4 LINE L1 5307 5488 -2320 405 296 34 28 chr20 57580907 57581086 -9086919 + L1MC4 LINE L1 6891 7070 -972 725 269 80 42 chr20 57581151 57581743 -9086262 + L1MC5 LINE L1 7004 7495 -520 317 330 8 0 chr20 57582374 57582492 -9085513 + L1MC4 LINE L1 7281 7399 -643 233 321 161 16 chr20 57582680 57582873 -9085132 + MIR SINE MIR 3 223 -39 2722 140 12 5 chr20 57583574 57583996 -9084009 + MSTA LTR MaLR 4 428 0 2271 102 0 3 chr20 57584533 57584826 -9083179 + AluSx SINE Alu 7 298 -14 240 167 0 0 chr20 57584864 57584906 -9083099 - Charlie8 DNA MER1_type -1000 1417 1376 * 1040 229 83 89 chr20 57584902 57585446 -9082559 - Charlie8 DNA MER1_type -2141 276 2 677 240 10 60 chr20 57585464 57585664 -9082341 - MER91B DNA MER1_type 0 190 1 1803 91 102 0 chr20 57587161 57587425 -9080580 + L1PB2 LINE L1 5495 5785 -366 2538 51 0 10 chr20 57587425 57587736 -9080269 + AluYa5 SINE Alu 1 308 -3 1227 129 0 0 chr20 57587739 57587902 -9080103 + AluSp SINE Alu 137 299 -14 2635 109 11 0 chr20 57587905 57588281 -9079724 + L1PB2 LINE L1 5769 6148 -3 363 256 184 0 chr20 57588348 57588473 -9079532 + MIR SINE MIR 45 192 -70 261 163 0 0 chr20 57588771 57588820 -9079185 - MIR SINE MIR -133 129 81 1339 102 0 0 chr20 57588869 57589035 -9078970 - AluSx SINE Alu -144 168 3 945 107 7 7 chr20 57589036 57589176 -9078829 + AluSg/x SINE Alu 168 307 -5 795 194 117 7 chr20 57591568 57591890 -9076115 - MLT1D LTR MaLR -1 504 117 2169 121 3 0 chr20 57592400 57592697 -9075308 - AluSx SINE Alu -14 298 1 200 35 35 0 chr20 57593151 57593180 -9074825 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 1123 261 144 3 chr20 57593211 57593564 -9074441 + Zaphod DNA AcHobo 118 520 -3511 349 125 0 83 chr20 57593565 57593637 -9074368 - MLT2D LTR ERVL 0 414 357 291 184 61 10 chr20 57593639 57593737 -9074268 + (TAGA)n Simple_repeat Simple_repeat 2 104 0 2335 192 48 9 chr20 57593744 57594198 -9073807 - MLT2B1 LTR ERVL -48 472 1 576 227 55 83 chr20 57594198 57594545 -9073460 + Zaphod DNA AcHobo 517 853 -3178 270 169 135 45 chr20 57594631 57594720 -9073285 + MER5C DNA MER1_type 5 101 -223 615 218 18 24 chr20 57594816 57594986 -9073019 + Zaphod DNA AcHobo 3595 3763 -268 316 246 186 0 chr20 57596721 57596839 -9071166 + MIR SINE MIR 12 151 -111 472 148 0 12 chr20 57597117 57597198 -9070807 + MADE1 DNA Mariner 1 80 0 604 205 106 7 chr20 57597403 57597554 -9070451 + L2 LINE L2 2392 2557 -757 2687 242 13 27 chr20 57597554 57598177 -9069828 + MLT1E2 LTR MaLR 1 614 -12 1365 259 72 46 chr20 57598184 57598806 -9069199 + L2 LINE L2 2563 3221 -92 865 146 0 8 chr20 57598806 57598936 -9069069 - FLAM_C SINE Alu -1 132 4 1365 259 72 46 chr20 57598936 57598990 -9069015 + L2 LINE L2 3221 3272 -41 1097 237 105 24 chr20 57599622 57600040 -9067965 + MLT1C LTR MaLR 10 467 0 2971 134 45 14 chr20 57600230 57600721 -9067284 + MER84 LTR ERV1 1 506 -1 511 262 152 0 chr20 57600799 57600963 -9067042 + MER58A DNA MER1_type 36 224 0 348 352 52 17 chr20 57600963 57601193 -9066812 - L2 LINE L2 -495 2819 2582 782 250 86 60 chr20 57601531 57601741 -9066264 + L1ME4a LINE L1 5311 5514 -607 1887 164 0 7 chr20 57601741 57602040 -9065965 + AluJo SINE Alu 8 304 -8 782 250 86 60 chr20 57602040 57602261 -9065744 + L1ME4a LINE L1 5514 5753 -368 257 270 0 99 chr20 57602295 57602406 -9065599 - L2 LINE L2 -1 3312 3213 261 237 180 7 chr20 57602409 57602548 -9065457 + L1ME4a LINE L1 5788 5950 -171 532 174 0 11 chr20 57603648 57603740 -9064265 - 5S rRNA rRNA -30 91 1 1985 168 189 21 chr20 57603892 57604238 -9063767 + MER39 LTR ERV1 161 606 -101 3486 78 0 5 chr20 57604238 57604684 -9063321 - MLT2A1 LTR ERVL 0 444 1 1985 168 189 21 chr20 57604684 57604802 -9063203 + MER39 LTR ERV1 606 703 -4 823 206 231 11 chr20 57605556 57605833 -9062172 - LTR37A LTR ERV1 0 426 89 234 0 0 0 chr20 57605845 57605871 -9062134 + (A)n Simple_repeat Simple_repeat 1 26 0 3926 135 17 22 chr20 57606540 57607178 -9060827 + MER41B LTR ERV1 1 635 0 619 178 54 0 chr20 57607270 57607399 -9060606 + MER20 DNA MER1_type 2 137 -82 4155 159 45 69 chr20 57608051 57608963 -9059042 - MER4D LTR ERV1 -8 895 6 1332 163 0 69 chr20 57608962 57609239 -9058766 + MLT1B LTR MaLR 11 268 -122 * 637 115 135 0 chr20 57609239 57609343 -9058662 + MER84 LTR ERVI 1 118 -389 2450 97 31 60 chr20 57609348 57609731 -9058274 - MER51B LTR ERV1 -5 372 1 2553 121 10 23 chr20 57609731 57610129 -9057876 + MER84 LTR ERVI 115 507 0 852 164 0 0 chr20 57610129 57610256 -9057749 + MLT1B LTR MaLR 264 390 0 28 29 0 0 chr20 57610311 57610346 -9057659 + AT_rich Low_complexity Low_complexity 1 35 0 4206 186 19 51 chr20 57610347 57611348 -9056657 - LTR5 LTR ERVK 0 969 1 2427 97 0 6 chr20 57611362 57611673 -9056332 - AluSc SINE Alu 0 309 1 449 346 18 9 chr20 57611743 57611971 -9056034 - MIR SINE MIR 0 262 33 797 251 17 84 chr20 57612789 57612878 -9055127 - MLT1J LTR MaLR -16 495 402 1895 136 9 46 chr20 57612878 57613201 -9054804 + AluJo SINE Alu 1 311 -1 797 251 17 84 chr20 57613201 57613410 -9054595 - MLT1J LTR MaLR -109 402 217 220 250 0 0 chr20 57613865 57613913 -9054092 + L2 LINE L2 3254 3301 -12 5829 67 16 13 chr20 57614171 57614935 -9053070 + MER4E LTR ERV1 1 766 0 1853 121 66 3 chr20 57614970 57615259 -9052746 + AluSc SINE Alu 1 307 -2 993 269 57 71 chr20 57615278 57615657 -9052348 - MLT1J LTR MaLR -78 433 59 4275 139 2 2 chr20 57615657 57616292 -9051713 + MER41B LTR ERV1 1 635 0 993 269 57 71 chr20 57616292 57616351 -9051654 - MLT1J LTR MaLR -452 59 1 1006 159 97 0 chr20 57617042 57617237 -9050768 - MER20 DNA MER1_type 0 219 6 3610 122 10 47 chr20 57617251 57617538 -9050467 - MER4A LTR ERV1 0 600 304 2162 142 0 0 chr20 57617538 57617841 -9050164 - AluSx SINE Alu -9 303 1 3610 122 10 47 chr20 57617841 57618176 -9049829 - MER4A LTR ERV1 -296 304 1 2143 192 32 36 chr20 57618322 57618799 -9049206 - LTR10B LTR ERV1 0 505 1 186 214 0 0 chr20 57618799 57618841 -9049164 - L2 LINE L2 -74 3239 3198 426 382 9 9 chr20 57618844 57619064 -9048941 - MIR SINE MIR -22 240 21 3350 143 6 2 chr20 57619064 57619590 -9048415 + MER41B LTR ERV1 1 528 -107 706 116 0 27 chr20 57619593 57619705 -9048300 - AluSg/x SINE Alu 0 309 201 3291 110 55 19 chr20 57619751 57620279 -9047726 + LTR10A LTR ERV1 1 547 -62 1556 125 0 0 chr20 57620291 57620499 -9047506 - AluSq SINE Alu -105 208 1 712 114 44 0 chr20 57620500 57620614 -9047391 + MER41A LTR ERV1 436 554 0 274 263 144 8 chr20 57620622 57620740 -9047265 - MIR SINE MIR -12 250 117 234 263 18 3 chr20 57620762 57620894 -9047111 - MLT1L LTR MaLR -438 177 14 1045 176 63 148 chr20 57620990 57621416 -9046589 - MLT1B LTR MaLR 0 390 1 226 336 19 9 chr20 57622747 57622854 -9045151 + LTR16A LTR ERVL 2 109 -341 1329 276 78 27 chr20 57622932 57623382 -9044623 - MLT1E2 LTR MaLR -64 562 90 2400 169 64 4 chr20 57623386 57623837 -9044168 + MER9 LTR ERVK 34 511 0 334 266 0 0 chr20 57623837 57623916 -9044089 - MLT1E2 LTR MaLR -404 101 23 219 373 20 0 chr20 57624036 57624138 -9043867 - L2 LINE L2 -22 3291 3188 789 202 62 6 chr20 57624138 57624316 -9043689 + MER5A DNA MER1_type 2 189 0 785 230 36 41 chr20 57624338 57624534 -9043471 - MER58A DNA MER1_type -2 222 28 2104 198 65 42 chr20 57624879 57625373 -9042632 + MLT1D LTR MaLR 1 505 0 339 343 47 12 chr20 57625383 57625552 -9042453 - MER117 DNA MER1_type 0 197 23 560 279 14 0 chr20 57625562 57625702 -9042303 - LTR67 LTR ERVL -14 543 402 2450 88 7 0 chr20 57625870 57626177 -9041828 - AluSc SINE Alu 0 309 1 696 176 30 8 chr20 57626388 57626519 -9041486 - AluJo SINE Alu -177 135 2 229 217 0 7 chr20 57626576 57626688 -9041317 + MER5A DNA MER1_type 10 182 -7 4543 62 4 0 chr20 57626839 57627391 -9040614 + MER41A LTR ERV1 1 554 0 1445 196 55 0 chr20 57628415 57628686 -9039319 + L1MB7 LINE L1 5883 6168 -16 734 169 5 33 chr20 57628923 57629107 -9038898 + GA-rich Low_complexity Low_complexity 2 180 0 180 158 26 0 chr20 57629236 57629274 -9038731 - L2 LINE L2 -4 3268 3230 944 118 0 7 chr20 57629478 57629613 -9038392 + AluSg/x SINE Alu 160 293 -17 2307 84 0 10 chr20 57629984 57630280 -9037725 - AluSc SINE Alu -16 293 1 307 294 84 17 chr20 57630554 57630691 -9037314 + MIR SINE MIR 17 160 -65 2249 212 51 2 chr20 57631039 57631549 -9036456 + L1MD3 LINE L1 7447 7981 -14 1894 161 26 7 chr20 57631567 57631872 -9036133 + AluJb SINE Alu 1 311 -1 1034 274 118 15 chr20 57632375 57632783 -9035222 + LTR16A LTR ERVL 1 450 0 337 200 14 14 chr20 57632843 57632913 -9035092 + MLT1J LTR MaLR 109 178 -333 263 271 102 33 chr20 57633034 57633256 -9034749 + MLT1L LTR MaLR 267 507 -4 224 219 172 0 chr20 57634123 57634187 -9033818 - L2 LINE L2 0 3313 3239 683 283 46 30 chr20 57634251 57634608 -9033397 - MLT1J LTR MaLR -34 477 71 2806 84 0 3 chr20 57634907 57635263 -9032742 + THE1A LTR MaLR 1 355 0 476 274 28 11 chr20 57635374 57635553 -9032452 + MIR SINE MIR 81 262 0 469 286 58 19 chr20 57636487 57636641 -9031364 - MLT1K LTR MaLR -68 520 361 262 156 0 78 chr20 57636749 57636813 -9031192 + MER3 DNA MER1_type 1 59 -150 1357 330 73 30 chr20 57637398 57638500 -9029505 - L2 LINE L2 -489 2825 1676 7497 55 17 5 chr20 57638878 57640561 -9027444 + L1PA5 LINE L1 4456 6146 -8 2248 251 41 23 chr20 57640883 57641655 -9026350 - L1MB7 LINE L1 0 6291 5556 205 320 93 0 chr20 57641702 57641777 -9026228 - L2 LINE L2 -44 3228 3147 754 285 50 83 chr20 57641987 57642492 -9025513 - MLT1J LTR MaLR -14 497 10 651 304 75 31 chr20 57642571 57642890 -9025115 - LTR16C LTR ERVL -3 488 156 417 119 48 36 chr20 57643219 57643303 -9024702 - L1MB8 LINE L1 -1 6177 6093 1258 169 12 46 chr20 57643310 57643599 -9024406 - L1MB7 LINE L1 -745 5401 5138 2199 117 0 23 chr20 57643599 57643906 -9024099 - AluSx SINE Alu -12 300 1 1258 169 12 46 chr20 57643906 57643938 -9024067 - L1MB7 LINE L1 -1008 5138 5106 231 369 18 0 chr20 57644007 57644118 -9023887 - L2 LINE L2 -214 3058 2946 253 184 0 0 chr20 57644704 57644742 -9023263 + LTR56 LTR ERV1 349 386 -59 421 243 113 27 chr20 57644823 57645211 -9022794 - L1ME LINE L1 -550 5612 5176 348 24 0 0 chr20 57645367 57645408 -9022597 + (TG)n Simple_repeat Simple_repeat 2 42 0 204 339 67 38 chr20 57645522 57645864 -9022141 + L2 LINE L2 2378 2729 -585 598 280 51 94 chr20 57646212 57646583 -9021422 + L2 LINE L2 2909 3263 -9 180 200 0 0 chr20 57646590 57646630 -9021375 + (CAAA)n Simple_repeat Simple_repeat 3 42 0 317 204 0 10 chr20 57647144 57647247 -9020758 + CT-rich Low_complexity Low_complexity 2 103 0 360 0 0 0 chr20 57649270 57649310 -9018695 + (TG)n Simple_repeat Simple_repeat 2 41 0 277 292 46 0 chr20 57650236 57650350 -9017655 - MIR SINE MIR -64 144 73 331 238 29 57 chr20 57650527 57650632 -9017373 - MER5A DNA MER1_type -84 105 4 508 309 72 0 chr20 57650689 57650883 -9017122 - MIR SINE MIR -20 242 35 632 273 137 29 chr20 57651515 57652018 -9015987 + L2 LINE L2 2646 3200 -113 456 277 24 61 chr20 57652570 57652783 -9015222 - MIR SINE MIR 0 262 58 201 284 15 0 chr20 57652948 57653015 -9014990 + MIR SINE MIR 77 144 -118 986 90 8 8 chr20 57653516 57653649 -9014356 + AluSq/x SINE Alu 1 133 -180 2100 132 7 3 chr20 57653652 57653948 -9014057 + AluSx SINE Alu 2 298 -14 950 196 46 21 chr20 57654270 57654464 -9013541 - MER20 DNA MER1_type -2 217 19 1289 187 139 12 chr20 57654897 57655148 -9012857 + AluSx SINE Alu 12 294 -18 273 315 145 15 chr20 57655253 57655453 -9012552 + MIR SINE MIR 27 252 -10 22 0 0 0 chr20 57655646 57655668 -9012337 + AT_rich Low_complexity Low_complexity 1 22 0 451 244 92 0 chr20 57656684 57656815 -9011190 + MLT1K LTR MaLR 369 511 -77 184 271 85 70 chr20 57657772 57657901 -9010104 + L2 LINE L2 3142 3272 0 292 289 9 18 chr20 57658049 57658163 -9009842 + MIR SINE MIR 116 228 -34 401 298 172 0 chr20 57658244 57658395 -9009610 - MER5A DNA MER1_type 0 189 13 282 264 101 39 chr20 57658916 57659045 -9008960 - MER5B DNA MER1_type -1 177 41 251 284 25 0 chr20 57659668 57659749 -9008256 + MIR SINE MIR 81 163 -99 349 294 208 59 chr20 57660039 57660511 -9007494 - MLT1K LTR MaLR -6 582 41 2142 108 0 0 chr20 57661127 57661441 -9006564 - AluSx SINE Alu 0 318 5 1625 239 52 4 chr20 57661449 57661910 -9006095 + L1MB7 LINE L1 5692 6174 -10 384 181 75 131 chr20 57662356 57662555 -9005450 - MER53 DNA DNA -1 188 1 417 276 32 0 chr20 57664109 57664232 -9003773 - MIR SINE MIR -116 146 20 319 298 32 16 chr20 57665138 57665262 -9002743 + MIR3 SINE MIR 4 129 -79 1655 145 57 27 chr20 57665282 57665578 -9002427 - AluJb SINE Alu -2 310 6 264 130 0 0 chr20 57666633 57666679 -9001326 + (TTCA)n Simple_repeat Simple_repeat 1 46 0 1175 161 0 54 chr20 57666679 57666903 -9001102 - AluJb SINE Alu -31 281 70 284 233 9 78 chr20 57667832 57667930 -9000075 - LTR33 LTR ERVL -6 515 426 1511 179 72 30 chr20 57667930 57668344 -8999661 + MER61D LTR ERV1 1 501 0 316 229 37 46 chr20 57668470 57668579 -8999426 - LTR33 LTR ERVL -306 215 108 652 155 90 176 chr20 57668579 57668857 -8999148 + LTR49-int LTR ERV1 3383 3636 -2695 233 240 135 0 chr20 57668857 57668961 -8999044 - LTR33 LTR ERVL -399 122 5 261 318 45 0 chr20 57668967 57669077 -8998928 + L2 LINE L2 3153 3267 -5 2243 104 3 0 chr20 57669918 57670206 -8997799 + AluSc SINE Alu 1 289 -20 331 286 27 9 chr20 57670450 57670562 -8997443 - L2 LINE L2 -1 3312 3199 2520 189 209 48 chr20 57670610 57671641 -8996364 + MER52C LTR ERV1 1 1275 -3 4630 135 18 9 chr20 57671650 57672652 -8995353 + MER52C-int LTR ERV1 6 1100 -5991 * 14145 119 16 9 chr20 57672649 57673505 -8994500 + MER52A-int LTR ERV1 4709 5558 -1533 3406 32 0 2 chr20 57673505 57673906 -8994099 + L1PA4 LINE L1 5751 6150 -5 14145 119 16 9 chr20 57673906 57675060 -8992945 + MER52A-int LTR ERV1 5558 6732 -359 1885 112 0 4 chr20 57675056 57675305 -8992700 + MER52A-int LTR ERV1 6843 7090 -1 * 4231 196 80 55 chr20 57675306 57676467 -8991538 + MER52A LTR ERV1 1 1190 -565 343 197 0 0 chr20 57676471 57676537 -8991468 + MER52A LTR ERV1 1690 1755 0 2455 148 70 27 chr20 57676566 57677012 -8990993 - LTR24 LTR ERV1 -2 465 1 1286 215 12 0 chr20 57677040 57677291 -8990714 + MER63B DNA MER1_type 1 254 -182 1465 133 11 64 chr20 57677456 57677720 -8990285 + AluJb SINE Alu 42 291 -21 1831 241 101 48 chr20 57677885 57678210 -8989795 + L1MC4 LINE L1 6775 7081 -961 2465 164 26 2 chr20 57678210 57678626 -8989379 + MSTB LTR MaLR 1 426 0 1831 241 101 48 chr20 57678626 57679002 -8989003 + L1MC4 LINE L1 7081 7513 -529 401 243 7 0 chr20 57679022 57679462 -8988543 + (TA)n Simple_repeat Simple_repeat 1 443 0 213 211 0 0 chr20 57679472 57679524 -8988481 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 620 173 6 0 chr20 57679526 57679705 -8988300 + (TA)n Simple_repeat Simple_repeat 1 180 0 750 186 0 0 chr20 57679720 57680395 -8987610 + (TA)n Simple_repeat Simple_repeat 1 675 0 330 243 0 0 chr20 57680462 57680639 -8987366 + (TA)n Simple_repeat Simple_repeat 1 177 0 234 133 0 44 chr20 57680642 57680687 -8987318 + MLT2B1 LTR ERVL 465 507 -13 268 182 0 0 chr20 57680694 57680738 -8987267 + MER94 DNA DNA 1 44 -90 291 104 0 0 chr20 57680802 57680850 -8987155 + (TA)n Simple_repeat Simple_repeat 1 48 0 189 0 0 0 chr20 57680849 57680870 -8987135 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 2007 180 17 3 chr20 57680870 57681220 -8986785 - MLT2D LTR ERVL -59 355 1 3474 158 31 38 chr20 57681355 57682644 -8985361 + L1MA6 LINE L1 4628 5888 -412 1051 146 10 83 chr20 57682648 57682853 -8985152 + AluJo SINE Alu 7 196 -116 218 82 0 61 chr20 57682855 57682904 -8985101 + (TA)n Simple_repeat Simple_repeat 2 47 0 344 157 0 90 chr20 57682910 57682999 -8985006 + L1MA5 LINE L1 6220 6300 0 649 251 28 45 chr20 57683432 57683611 -8984394 + MIR SINE MIR 1 176 -86 233 200 31 0 chr20 57683655 57683720 -8984285 + (CATATA)n Simple_repeat Simple_repeat 2 68 0 212 186 34 85 chr20 57685026 57685085 -8982920 + L2 LINE L2 3215 3270 -2 198 135 0 27 chr20 57685485 57685522 -8982483 - MIR SINE MIR -65 197 162 473 307 75 24 chr20 57686276 57686488 -8981517 - MLT1K LTR MaLR -302 286 64 4776 197 93 7 chr20 57686653 57687611 -8980394 - MER45B DNA AcHobo 0 1040 1 493 245 106 32 chr20 57688013 57688201 -8979804 - MIR SINE MIR -33 229 28 868 208 17 0 chr20 57688311 57688484 -8979521 + MER5B DNA MER1_type 1 176 -2 630 261 6 0 chr20 57688651 57688812 -8979193 - Zaphod DNA AcHobo -10 4021 3860 521 121 12 0 chr20 57688832 57688915 -8979090 - Zaphod DNA AcHobo -1145 2886 2803 553 234 77 34 chr20 57689275 57689484 -8978521 - MER115 DNA AcHobo -376 317 100 318 301 72 20 chr20 57689593 57689746 -8978259 - MIR SINE MIR -81 181 21 850 151 0 126 chr20 57689935 57689980 -8978025 - AluJb SINE Alu -2 310 261 1444 122 186 76 chr20 57689980 57690308 -8977697 - THE1B LTR MaLR 0 364 1 850 151 0 126 chr20 57690308 57690461 -8977544 - AluJb SINE Alu -51 261 137 340 248 24 159 chr20 57690465 57690760 -8977245 + Charlie2 DNA MER1_type 72 326 -2456 2753 226 80 40 chr20 57690762 57691196 -8976809 + Charlie2 DNA MER1_type 1856 2271 -591 2344 85 3 0 chr20 57691196 57691491 -8976514 + AluSx SINE Alu 1 296 -16 2753 226 80 40 chr20 57691491 57691626 -8976379 + Charlie2 DNA MER1_type 2271 2399 -463 324 70 0 0 chr20 57691626 57691669 -8976336 + (TG)n Simple_repeat Simple_repeat 2 44 0 2753 226 80 40 chr20 57691669 57691989 -8976016 + Charlie2 DNA MER1_type 2399 2705 -157 1761 182 3 10 chr20 57691989 57692291 -8975714 + AluJb SINE Alu 1 300 -12 2753 226 80 40 chr20 57692291 57692308 -8975697 + Charlie2 DNA MER1_type 2705 2720 -142 1879 170 64 6 chr20 57692308 57692650 -8975355 + MLT1A1 LTR MaLR 1 362 -3 2753 226 80 40 chr20 57692650 57692693 -8975312 + Charlie2 DNA MER1_type 2720 2846 -16 277 322 17 17 chr20 57692922 57693037 -8974968 + MIR SINE MIR 48 162 -100 2506 106 51 11 chr20 57693283 57693633 -8974372 + THE1B LTR MaLR 1 364 0 525 267 62 53 chr20 57694299 57694524 -8973481 + MIR SINE MIR 20 246 -16 357 358 78 10 chr20 57694559 57694752 -8973253 + L2 LINE L2 2838 3043 -229 928 313 105 16 chr20 57694880 57695328 -8972677 - MLT1K LTR MaLR -93 495 8 288 331 85 8 chr20 57695384 57695514 -8972491 + L2 LINE L2 3128 3267 -5 351 307 80 25 chr20 57696430 57696593 -8971412 - MLT1K LTR MaLR -256 332 161 620 292 66 0 chr20 57696868 57697085 -8970920 - MIR SINE MIR -12 250 16 447 275 183 0 chr20 57697178 57697320 -8970685 + MIR SINE MIR 1 168 -94 282 303 0 0 chr20 57697608 57697684 -8970321 - MIR SINE MIR -14 248 173 443 320 36 9 chr20 57697760 57697979 -8970026 + L1ME2 LINE L1 5605 5829 -292 369 273 62 8 chr20 57698443 57698571 -8969434 + MER102a DNA MER1_type 8 142 -188 2522 62 10 0 chr20 57698571 57698879 -8969126 + AluSp SINE Alu 2 312 -1 654 263 17 47 chr20 57698906 57699138 -8968867 + L1ME2 LINE L1 5928 6152 -12 346 200 100 40 chr20 57699384 57699484 -8968521 + MER102a DNA MER1_type 209 314 -16 574 287 122 70 chr20 57699958 57700516 -8967489 + MLT1L LTR MaLR 22 608 -7 1624 181 14 24 chr20 57700662 57700955 -8967050 - AluJb SINE Alu -22 290 1 188 317 135 19 chr20 57701326 57701430 -8966575 + MIR3 SINE MIR 8 123 -85 * 209 313 47 0 chr20 57701411 57701475 -8966530 - L2 LINE L2 -5 3267 3201 837 207 0 0 chr20 57701489 57701639 -8966366 + FRAM SINE Alu 1 146 -30 710 200 119 0 chr20 57701911 57702071 -8965934 - MER3 DNA MER1_type -30 179 1 247 196 43 0 chr20 57702086 57702132 -8965873 + MER66B LTR ERV1 292 339 -147 23 33 0 0 chr20 57702132 57702162 -8965843 + AT_rich Low_complexity Low_complexity 1 30 0 2065 123 24 3 chr20 57702361 57702653 -8965352 + AluSx SINE Alu 1 298 -14 22 35 0 0 chr20 57703185 57703214 -8964791 + AT_rich Low_complexity Low_complexity 1 29 0 648 307 6 0 chr20 57704736 57704921 -8963084 + MIR SINE MIR 42 227 -35 809 294 49 9 chr20 57705413 57705821 -8962184 - LTR33 LTR ERVL 0 521 57 420 224 80 8 chr20 57705853 57705978 -8962027 + MIR SINE MIR 128 261 -1 896 233 26 0 chr20 57706735 57706924 -8961081 + MIR SINE MIR 35 228 -34 * 1103 254 70 65 chr20 57706923 57707352 -8960653 - L2 LINE L2 0 3313 2883 412 219 102 0 chr20 57707342 57707479 -8960526 - L2 LINE L2 -749 2565 2415 * 225 192 0 0 chr20 57707625 57707677 -8960328 - L1MC4 LINE L1 -1339 6703 6652 309 51 0 0 chr20 57707677 57707716 -8960289 + (CA)n Simple_repeat Simple_repeat 2 40 0 4314 30 0 0 chr20 57707901 57708415 -8959590 + L1PA3 LINE L1 5680 6193 0 185 283 100 17 chr20 57708625 57708685 -8959320 - MIR SINE MIR -82 126 62 827 173 0 16 chr20 57708944 57709071 -8958934 + FLAM_C SINE Alu 2 126 -17 23 68 0 0 chr20 57709073 57709117 -8958888 + AT_rich Low_complexity Low_complexity 1 44 0 718 300 25 8 chr20 57709337 57709574 -8958431 - L1MC4 LINE L1 -2036 5772 5532 378 242 144 52 chr20 57710229 57710423 -8957582 - MLT1K LTR MaLR 0 588 377 2324 122 57 25 chr20 57710722 57711075 -8956930 + THE1B LTR MaLR 1 364 0 561 187 37 22 chr20 57711561 57711695 -8956310 + L1MB8 LINE L1 5693 5828 -350 * 4628 165 47 25 chr20 57711683 57712919 -8955086 + L1MB5 LINE L1 4906 6168 -6 1593 177 55 20 chr20 57712942 57713286 -8954719 + L1MB8 LINE L1 5821 6176 -2 243 0 0 0 chr20 57713289 57713316 -8954689 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 824 204 60 40 chr20 57713316 57713517 -8954488 + MLT1E3 LTR MaLR 420 624 0 266 238 22 116 chr20 57713759 57713940 -8954065 + L2 LINE L2 3093 3256 -57 1254 186 54 21 chr20 57713940 57714219 -8953786 + L1MA6 LINE L1 5979 6266 -34 9020 164 38 23 chr20 57714254 57716873 -8951132 + L1PB1 LINE L1 7 2948 -3914 2270 98 17 0 chr20 57716873 57717168 -8950837 + AluY SINE Alu 1 300 -11 9020 164 38 23 chr20 57717168 57718634 -8949371 + L1PB1 LINE L1 2948 4390 -2472 4824 166 10 1 chr20 57718611 57718672 -8949333 + L1PB1 LINE L1 5053 5112 -1755 * 189 0 0 0 chr20 57718672 57718693 -8949312 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 4824 166 10 1 chr20 57718693 57720072 -8947933 + L1PB1 LINE L1 5112 6507 -360 204 194 0 32 chr20 57720072 57720134 -8947871 + (TAGA)n Simple_repeat Simple_repeat 1 60 0 2309 154 0 18 chr20 57720142 57720525 -8947480 + L1PB1 LINE L1 6492 6867 0 569 244 39 8 chr20 57720687 57720814 -8947191 + L2 LINE L2 3183 3313 0 843 225 20 5 chr20 57720921 57721121 -8946884 - MER20 DNA MER1_type -1 218 16 503 202 90 45 chr20 57722438 57722616 -8945389 + LTR33 LTR ERVL 16 201 -320 1619 232 25 0 chr20 57722631 57722984 -8945021 - MLT1B LTR MaLR -27 363 2 496 133 10 82 chr20 57723550 57723648 -8944357 - MER20 DNA MER1_type -6 213 123 1621 272 89 68 chr20 57723709 57724098 -8943907 + MER115 DNA AcHobo 14 424 -269 2429 76 3 0 chr20 57724098 57724402 -8943603 + AluY SINE Alu 1 305 -6 1621 272 89 68 chr20 57724402 57724678 -8943327 + MER115 DNA AcHobo 424 693 0 3658 197 24 26 chr20 57726342 57726485 -8941520 - L1MB7 LINE L1 -16 6168 6026 1892 159 7 0 chr20 57726485 57726962 -8941043 + AluSx SINE Alu 1 479 0 3658 197 24 26 chr20 57726962 57727583 -8940422 - L1MB7 LINE L1 -158 6026 5404 358 316 75 73 chr20 57727713 57727757 -8940248 - L2 LINE L2 -244 3028 2986 2171 137 0 0 chr20 57727757 57728064 -8939941 + AluSx SINE Alu 1 307 -5 358 316 75 73 chr20 57728064 57728444 -8939561 - L2 LINE L2 -286 2986 2596 2247 104 10 0 chr20 57728875 57729172 -8938833 + AluSg SINE Alu 1 300 -10 3059 171 59 100 chr20 57729793 57730551 -8937454 + LTR8A LTR ERV1 1 727 0 793 281 70 44 chr20 57730976 57731317 -8936688 - L2 LINE L2 -572 2742 2393 2619 138 52 5 chr20 57731320 57731727 -8936278 + MSTB LTR MaLR 1 426 0 2202 125 3 0 chr20 57731831 57732135 -8935870 - AluSx SINE Alu -7 305 1 294 296 225 0 chr20 57732297 57732439 -8935566 + MIR SINE MIR 25 198 -64 887 149 32 0 chr20 57732449 57732603 -8935402 + L1MB7 LINE L1 6003 6161 -23 2071 103 3 56 chr20 57732730 57733051 -8934954 + AluSx SINE Alu 1 304 -8 635 163 0 0 chr20 57733373 57733465 -8934540 - AluJb SINE Alu -22 290 199 1094 198 8 58 chr20 57733477 57733660 -8934345 + MLT1F1 LTR MaLR 333 503 -64 2210 85 43 0 chr20 57733660 57733942 -8934063 - AluY SINE Alu -17 294 1 1094 198 8 58 chr20 57733942 57734000 -8934005 + MLT1F1 LTR MaLR 503 562 -5 2342 180 62 18 chr20 57734011 57734637 -8933368 - LTR8A LTR ERV1 0 691 1 1812 152 26 13 chr20 57734739 57735042 -8932963 + AluJb SINE Alu 1 307 -5 36663 98 11 11 chr20 57735047 57737179 -8930826 + L1P LINE L1 13 2143 -4003 2310 79 0 0 chr20 57737179 57737470 -8930535 - AluY SINE Alu -20 291 1 36663 98 11 11 chr20 57737470 57740540 -8927465 + L1P LINE L1 2143 5220 -926 1720 115 0 0 chr20 57740540 57740775 -8927230 - AluSq SINE Alu -76 237 3 272 29 0 0 chr20 57740880 57740915 -8927090 - L1P LINE L1 -1149 4997 4963 1339 98 128 0 chr20 57741027 57741231 -8926774 - MER30 DNA MER1_type 0 230 1 428 256 66 36 chr20 57741245 57741382 -8926623 + MER102b DNA MER1_type 7 147 -194 1125 202 184 56 chr20 57741405 57741804 -8926201 - MLT1H LTR MaLR -54 495 1 376 283 64 16 chr20 57741807 57741994 -8926011 + MER102b DNA MER1_type 146 341 0 299 270 0 14 chr20 57742963 57743037 -8924968 + MIR SINE MIR 103 175 -87 190 136 45 0 chr20 57743115 57743159 -8924846 + (TAA)n Simple_repeat Simple_repeat 3 48 0 406 303 46 51 chr20 57743210 57743256 -8924749 - MIR SINE MIR -22 240 195 2064 117 20 0 chr20 57743256 57743555 -8924450 - AluSx SINE Alu -7 305 1 406 303 46 51 chr20 57743555 57743703 -8924302 - MIR SINE MIR -67 195 47 231 146 0 0 chr20 57744179 57744220 -8923785 + (CA)n Simple_repeat Simple_repeat 1 41 0 417 344 120 10 chr20 57744524 57744908 -8923097 + L2 LINE L2 2550 2975 -339 331 290 76 35 chr20 57745017 57745162 -8922843 + L2 LINE L2 3122 3272 0 601 218 26 179 chr20 57745236 57745544 -8922461 - MIR SINE MIR 0 262 2 1030 71 0 0 chr20 57745624 57745751 -8922254 + AluSx SINE Alu 2 128 -185 249 33 0 0 chr20 57745751 57745781 -8922224 + (TA)n Simple_repeat Simple_repeat 1 30 0 301 258 0 0 chr20 57745794 57745883 -8922122 - L1MC4 LINE L1 -1339 6703 6615 224 238 0 0 chr20 57745884 57745926 -8922079 + (TATATG)n Simple_repeat Simple_repeat 2 43 0 230 152 0 0 chr20 57745926 57745972 -8922033 + LTR66 LTR ERVL 394 439 -171 1191 111 0 0 chr20 57745999 57746170 -8921835 + AluSx SINE Alu 135 305 -7 435 256 96 45 chr20 57746481 57746517 -8921488 + L2 LINE L2 3150 3183 -130 3301 194 47 13 chr20 57746517 57747204 -8920801 + MER67C LTR ERV1 1 710 0 435 256 96 45 chr20 57747204 57747323 -8920682 + L2 LINE L2 3183 3313 0 236 28 56 0 chr20 57747742 57747778 -8920227 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 1539 154 0 83 chr20 57747824 57748162 -8919843 - AluSx SINE Alu 0 312 3 909 258 14 5 chr20 57748354 57748563 -8919442 - MIR SINE MIR -36 226 16 439 371 30 4 chr20 57748664 57748896 -8919109 - MIR SINE MIR -11 251 14 194 262 0 0 chr20 57749165 57749207 -8918798 + L2 LINE L2 3264 3305 -8 348 333 61 20 chr20 57749463 57749661 -8918344 - MIR SINE MIR -43 219 14 186 262 0 0 chr20 57749707 57749749 -8918256 + L2 LINE L2 3272 3313 0 232 290 43 21 chr20 57749885 57749978 -8918027 + L1MC/D LINE L1 5722 5816 -1992 2022 99 0 7 chr20 57750040 57750322 -8917683 + AluSx SINE Alu 1 280 -32 1227 243 181 33 chr20 57750331 57750813 -8917192 - MLT1F1 LTR MaLR -38 555 3 214 238 0 0 chr20 57752060 57752102 -8915903 + (CACG)n Simple_repeat Simple_repeat 4 45 0 353 257 104 73 chr20 57752322 57752390 -8915615 + L1MC4a LINE L1 5161 5225 -937 2071 121 0 0 chr20 57752390 57752680 -8915325 + AluSx SINE Alu 1 290 -22 353 257 104 73 chr20 57752680 57752859 -8915146 + L1MC4a LINE L1 5225 5415 -747 403 217 0 66 chr20 57752859 57752965 -8915040 + MLT1D LTR MaLR 1 99 -406 1741 175 14 0 chr20 57752995 57753287 -8914718 + AluJo SINE Alu 1 296 -16 546 176 8 40 chr20 57753287 57753412 -8914593 + MER45 DNA AcHobo 1403 1523 -58 852 160 13 0 chr20 57753418 57753574 -8914431 - FRAM SINE Alu -1 175 18 543 165 0 11 chr20 57753574 57753660 -8914345 + Tigger2 DNA MER2_type 2345 2430 -284 2012 101 0 57 chr20 57753660 57753976 -8914029 - AluSq SINE Alu -15 298 1 2179 112 0 0 chr20 57754083 57754388 -8913617 + AluSx SINE Alu 1 305 -7 899 257 74 91 chr20 57754406 57754877 -8913128 + L1MC4a LINE L1 5555 6017 -104 302 269 0 13 chr20 57755252 57755330 -8912675 - Charlie8 DNA MER1_type -1000 1417 1349 2174 62 0 0 chr20 57755336 57755610 -8912395 + AluY SINE Alu 34 307 -4 561 318 46 0 chr20 57755720 57755915 -8912090 - MIR SINE MIR -19 243 40 1736 147 13 17 chr20 57756153 57756453 -8911552 - AluJb SINE Alu -13 299 1 1981 250 81 18 chr20 57756459 57757064 -8910941 - L1ME1 LINE L1 -3 6163 5521 29 78 0 0 chr20 57757432 57757496 -8910509 + GC_rich Low_complexity Low_complexity 1 64 0 202 211 19 0 chr20 57757652 57757704 -8910301 + C-rich Low_complexity Low_complexity 4 56 0 241 338 0 0 chr20 57757929 57758000 -8910005 - MIR SINE MIR -56 152 82 366 226 156 44 chr20 57758122 57758392 -8909613 - MER113 DNA MER1_type? -175 346 47 181 329 60 48 chr20 57758443 57758610 -8909395 + MIR SINE MIR 32 200 -62 266 293 65 24 chr20 57758811 57758934 -8909071 + L2 LINE L2 2989 3116 -156 435 272 218 0 chr20 57759027 57759233 -8908772 + MIR SINE MIR 4 254 -8 688 296 96 17 chr20 57759738 57760039 -8907966 + L2 LINE L2 2971 3295 -18 931 230 56 32 chr20 57760049 57760235 -8907770 + MIR SINE MIR 3 198 -64 648 167 45 53 chr20 57760235 57760261 -8907744 - FLAM_C SINE Alu -171 131 106 2189 108 0 0 chr20 57760261 57760568 -8907437 + AluSx SINE Alu 1 307 -5 648 167 45 53 chr20 57760568 57760673 -8907332 - FLAM_C SINE Alu -196 106 1 931 230 56 32 chr20 57760673 57760738 -8907267 + MIR SINE MIR 198 260 -2 209 318 0 16 chr20 57760976 57761039 -8906966 + L2 LINE L2 3211 3272 0 405 324 167 5 chr20 57762442 57762652 -8905353 + MIR SINE MIR 5 248 -14 2233 156 69 45 chr20 57762683 57763176 -8904829 - MLT1D LTR MaLR 0 505 1 1889 133 0 4 chr20 57763256 57763535 -8904470 + AluSg SINE Alu 18 295 -15 1794 130 0 33 chr20 57763910 57764069 -8903936 - AluJo SINE Alu -21 291 145 2044 103 3 0 chr20 57764069 57764369 -8903636 - AluSc SINE Alu -8 301 1 1794 130 0 33 chr20 57764369 57764510 -8903495 - AluJo SINE Alu -167 145 1 250 256 24 0 chr20 57765726 57765808 -8902197 + MER113 DNA MER1_type? 135 218 -303 2100 99 10 0 chr20 57765923 57766215 -8901790 + AluSx SINE Alu 1 295 -17 210 71 0 0 chr20 57766896 57766924 -8901081 + (A)n Simple_repeat Simple_repeat 1 28 0 227 230 292 26 chr20 57769342 57769455 -8898550 - MIR SINE MIR -91 171 29 502 258 115 79 chr20 57769713 57769747 -8898258 + L1MC4 LINE L1 7277 7308 -734 2307 71 3 0 chr20 57769747 57770042 -8897963 + AluY SINE Alu 1 296 -15 502 258 115 79 chr20 57770042 57770508 -8897497 + L1MC4 LINE L1 7308 7900 -142 189 0 0 0 chr20 57771100 57771121 -8896884 + (A)n Simple_repeat Simple_repeat 1 21 0 1890 141 30 0 chr20 57772235 57772533 -8895472 + AluJo SINE Alu 1 307 -5 315 0 0 0 chr20 57772583 57772618 -8895387 + (CA)n Simple_repeat Simple_repeat 2 36 0 236 57 57 0 chr20 57772759 57772794 -8895211 - HSMAR1 DNA Mariner -1250 37 1 865 133 0 22 chr20 57773167 57773302 -8894703 - FLAM_C SINE Alu -1 132 1 2150 131 0 0 chr20 57773332 57773638 -8894367 + AluSq SINE Alu 1 306 -7 1531 150 6 70 chr20 57773698 57774011 -8893994 - AluJo SINE Alu -19 293 1 1944 121 7 24 chr20 57775364 57775662 -8892343 + AluSx SINE Alu 1 293 -19 1120 151 65 0 chr20 57775662 57775861 -8892144 + AluJb SINE Alu 89 300 -12 953 159 94 70 chr20 57775871 57776073 -8891932 + L1MC3 LINE L1 5176 5371 -914 2304 79 0 0 chr20 57776073 57776363 -8891642 + AluSc SINE Alu 1 290 -19 953 159 94 70 chr20 57776363 57776458 -8891547 + L1MC3 LINE L1 5371 5480 -805 1436 184 67 3 chr20 57776458 57776740 -8891265 + AluJb SINE Alu 1 300 -12 953 159 94 70 chr20 57776740 57776800 -8891205 + L1MC3 LINE L1 5480 5537 -748 1019 169 44 0 chr20 57776821 57777004 -8891001 - L1MC3 LINE L1 -1381 6404 6214 * 1155 168 91 42 chr20 57777001 57778246 -8889759 + L1MC3 LINE L1 5546 6728 -1057 2249 102 0 3 chr20 57778246 57778550 -8889455 + AluSx SINE Alu 1 303 -9 1155 168 91 42 chr20 57778550 57778641 -8889364 + L1MC3 LINE L1 6728 6813 -972 2396 84 0 0 chr20 57778641 57778951 -8889054 + AluSg SINE Alu 1 310 0 1155 168 91 42 chr20 57778951 57779050 -8888955 + L1MC3 LINE L1 6813 6906 -879 189 74 0 0 chr20 57779050 57779077 -8888928 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 1155 168 91 42 chr20 57779077 57779568 -8888437 + L1MC3 LINE L1 6906 7767 -18 663 150 125 17 chr20 57779568 57779688 -8888317 + FLAM_A SINE Alu 1 133 0 1155 168 91 42 chr20 57779688 57779706 -8888299 + L1MC3 LINE L1 7767 7783 -2 2353 86 0 0 chr20 57780450 57780754 -8887251 + AluSg SINE Alu 1 304 -6 710 203 71 22 chr20 57781285 57781467 -8886538 - LTR48B LTR ERV1 -71 573 383 424 271 88 33 chr20 57783722 57783903 -8884102 + MIR SINE MIR 65 255 -7 205 297 93 85 chr20 57783908 57784029 -8883976 + L2 LINE L2 2568 2686 -628 2300 87 3 0 chr20 57784029 57784327 -8883678 - AluSp SINE Alu -14 299 1 205 297 93 85 chr20 57784327 57784441 -8883564 + L2 LINE L2 2686 2805 -509 352 270 109 35 chr20 57785367 57785541 -8882464 + L1ME4a LINE L1 5826 6012 -109 2226 98 0 3 chr20 57785733 57786018 -8881987 - AluSg1 SINE Alu -25 284 1 899 286 142 30 chr20 57786942 57787096 -8880909 + L2 LINE L2 1536 1671 -1643 2335 108 0 0 chr20 57787096 57787401 -8880604 + AluSq SINE Alu 1 305 -8 899 286 142 30 chr20 57787401 57787999 -8880006 + L2 LINE L2 1671 2372 -942 1995 258 87 28 chr20 57788000 57788872 -8879133 + L2 LINE L2 2093 3013 -300 2368 83 7 3 chr20 57788872 57789173 -8878832 - AluSp SINE Alu -11 302 1 352 155 6 0 chr20 57789193 57789259 -8878746 + Alu SINE Alu 244 293 -9 196 167 24 24 chr20 57789615 57789657 -8878348 - MER5B DNA MER1_type -133 45 4 186 260 0 0 chr20 57789918 57789968 -8878037 + MER5A DNA MER1_type 56 105 -84 403 298 94 18 chr20 57790018 57790189 -8877816 - MER5A DNA MER1_type -3 186 3 180 258 0 48 chr20 57790361 57790423 -8877582 + L2 LINE L2 3180 3238 -75 255 170 0 0 chr20 57791684 57791731 -8876274 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 186 43 0 0 chr20 57791737 57791760 -8876245 + (TG)n Simple_repeat Simple_repeat 2 24 0 301 253 23 35 chr20 57791809 57791896 -8876109 - MER34 LTR ERV1 0 542 457 406 227 96 35 chr20 57792307 57792539 -8875466 - MER34 LTR ERV1 -375 269 1 237 293 12 37 chr20 57792746 57792828 -8875177 + MIR SINE MIR 183 262 0 2415 70 0 3 chr20 57792870 57793169 -8874836 + AluSx SINE Alu 1 298 -14 344 289 199 30 chr20 57793824 57794025 -8873980 - MIR SINE MIR 0 262 28 180 324 248 7 chr20 57794478 57794623 -8873382 + L2 LINE L2 2904 3083 -230 267 258 0 0 chr20 57794868 57794930 -8873075 + L1ME4a LINE L1 5601 5662 -459 311 234 81 9 chr20 57795157 57795268 -8872737 + L1ME4a LINE L1 5985 6103 -18 1803 172 0 7 chr20 57796853 57797144 -8870861 + AluJb SINE Alu 1 289 -23 201 324 27 0 chr20 57798042 57798116 -8869889 - MIR SINE MIR -117 145 70 2362 80 0 0 chr20 57799325 57799611 -8868394 + AluSg SINE Alu 1 286 -24 448 320 118 17 chr20 57799779 57800287 -8867718 + L1MB7 LINE L1 5255 5822 -299 478 217 154 23 chr20 57800334 57800509 -8867496 - MIR SINE MIR -62 200 3 2348 115 0 0 chr20 57800591 57800896 -8867109 + AluSx SINE Alu 1 305 -7 363 249 94 82 chr20 57801075 57801221 -8866784 + L1ME4a LINE L1 5603 5755 -366 2340 99 0 0 chr20 57801221 57801515 -8866490 + AluSc SINE Alu 1 294 -15 363 249 94 82 chr20 57801515 57801601 -8866404 + L1ME4a LINE L1 5755 5838 -283 688 134 0 0 chr20 57801783 57801880 -8866125 - AluJ/FLAM SINE Alu -213 99 3 2254 78 0 75 chr20 57803197 57803531 -8864474 - AluY SINE Alu -2 309 1 2284 66 3 11 chr20 57803755 57804075 -8863930 - AluSp SINE Alu 0 318 1 250 203 27 0 chr20 57804659 57804733 -8863272 + (TTTG)n Simple_repeat Simple_repeat 3 78 0 2230 105 0 3 chr20 57805111 57805405 -8862600 - AluSg SINE Alu -17 293 1 251 253 93 0 chr20 57805515 57805590 -8862415 + MIR SINE MIR 55 136 -72 718 297 108 60 chr20 57805922 57806440 -8861565 + L1MEd LINE L1 274 816 -5303 1846 150 3 7 chr20 57806479 57806772 -8861233 + AluSx SINE Alu 1 292 -20 2407 82 0 7 chr20 57806801 57807104 -8860901 + AluSp SINE Alu 1 301 -12 1779 146 59 3 chr20 57807611 57807899 -8860106 - AluSx SINE Alu -8 304 1 211 264 35 81 chr20 57808738 57808825 -8859180 + MIR SINE MIR 32 114 -94 648 154 150 82 chr20 57808852 57809024 -8858981 + L1MB7 LINE L1 5934 6132 -38 2251 110 0 3 chr20 57809024 57809324 -8858681 + AluSc SINE Alu 1 299 -10 648 154 150 82 chr20 57809324 57809362 -8858643 + L1MB7 LINE L1 6132 6166 -4 33 25 0 0 chr20 57809362 57809402 -8858603 + AT_rich Low_complexity Low_complexity 1 40 0 28 0 0 0 chr20 57809690 57809718 -8858287 + AT_rich Low_complexity Low_complexity 1 28 0 2365 98 0 0 chr20 57809831 57810128 -8857877 + AluSx SINE Alu 1 297 -15 752 176 15 0 chr20 57811623 57811754 -8856251 + FLAM_A SINE Alu 1 133 0 2252 123 0 0 chr20 57811965 57812266 -8855739 + AluSx SINE Alu 9 309 -3 381 283 19 0 chr20 57812526 57812632 -8855373 - L1MC4 LINE L1 -138 7904 7797 591 222 17 8 chr20 57813022 57813139 -8854866 - FLAM_A SINE Alu -12 121 4 1362 117 30 10 chr20 57813235 57813432 -8854573 + AluSx SINE Alu 1 201 -111 728 241 79 21 chr20 57813446 57813687 -8854318 - MIR SINE MIR 0 262 8 435 179 77 0 chr20 57813700 57813778 -8854227 - MER58 DNA MER1_type 0 2420 132 369 270 90 84 chr20 57814217 57814550 -8853455 + Tigger8 DNA MER2_type 4 338 -328 2315 104 0 0 chr20 57814627 57814916 -8853089 - AluSx SINE Alu -23 289 1 276 30 0 0 chr20 57815095 57815128 -8852877 + (TG)n Simple_repeat Simple_repeat 1 33 0 490 277 83 32 chr20 57815959 57816237 -8851768 + L2 LINE L2 3022 3313 0 731 328 48 17 chr20 57816747 57817139 -8850866 - L2 LINE L2 -296 3017 2622 256 241 69 0 chr20 57817365 57817423 -8850582 - L2 LINE L2 -1 3312 3251 1719 143 4 15 chr20 57818032 57818297 -8849708 - AluSx SINE Alu -50 262 1 2384 95 0 3 chr20 57818327 57818633 -8849372 + AluSp SINE Alu 1 305 -8 1968 138 0 20 chr20 57818963 57819261 -8848744 - AluJo SINE Alu -20 292 1 1991 148 7 3 chr20 57819981 57820286 -8847719 + AluJo SINE Alu 1 306 -6 185 192 0 19 chr20 57820396 57820448 -8847557 + GA-rich Low_complexity Low_complexity 2 52 0 261 292 11 11 chr20 57820545 57820634 -8847371 - MIR3 SINE MIR -25 183 95 200 296 99 0 chr20 57820949 57821020 -8846985 + L2 LINE L2 3235 3312 -1 2200 110 0 0 chr20 57822107 57822411 -8845594 - AluSx SINE Alu 0 304 1 2481 88 0 0 chr20 57823025 57823330 -8844675 + AluSx SINE Alu 1 305 -7 259 271 25 57 chr20 57824479 57824601 -8843404 - L1MC/D LINE L1 -1910 5898 5781 571 289 18 16 chr20 57824698 57824933 -8843072 + MIR SINE MIR 4 234 -28 203 143 71 0 chr20 57824962 57825004 -8843001 - L2 LINE L2 -56 3216 3172 236 98 0 24 chr20 57825098 57825139 -8842866 + (TTC)n Simple_repeat Simple_repeat 2 41 0 1892 144 0 11 chr20 57825161 57825445 -8842560 - AluJb SINE Alu -31 281 1 1254 143 0 0 chr20 57825581 57825756 -8842249 + FAM SINE Alu 1 175 0 488 279 107 10 chr20 57826786 57826983 -8841022 - LTR16B LTR ERVL -75 389 174 311 242 0 0 chr20 57827149 57827215 -8840790 + Charlie8 DNA MER1_type 2344 2409 -8 283 254 36 45 chr20 57827351 57827461 -8840544 + MIR SINE MIR 37 145 -117 219 231 0 0 chr20 57828172 57828224 -8839781 + (CA)n Simple_repeat Simple_repeat 2 53 0 271 225 108 70 chr20 57828522 57828651 -8839354 + L2 LINE L2 3158 3291 -22 189 0 0 0 chr20 57828660 57828681 -8839324 + (TGAA)n Simple_repeat Simple_repeat 1 21 0 538 294 119 7 chr20 57829289 57829677 -8838328 - L2 LINE L2 -251 3062 2626 430 141 39 0 chr20 57829682 57829760 -8838245 + MIR SINE MIR 85 165 -97 612 172 15 18 chr20 57830502 57830647 -8837358 - LTR37A LTR ERV1 -1 425 296 374 234 78 23 chr20 57830675 57830803 -8837202 - LTR37B LTR ERV1 -122 346 212 2026 138 3 3 chr20 57830922 57831234 -8836771 - AluJb SINE Alu 0 312 1 266 339 68 47 chr20 57831589 57832099 -8835906 - L2 LINE L2 0 3272 2715 1008 293 60 42 chr20 57832635 57832997 -8835008 + L1ME4a LINE L1 5475 5855 -266 1976 118 3 35 chr20 57832997 57833310 -8834695 - AluSg SINE Alu 0 304 1 1008 293 60 42 chr20 57833310 57833581 -8834424 + L1ME4a LINE L1 5855 6120 -1 427 154 147 38 chr20 57833937 57834070 -8833935 + HAL1b LINE L1 1247 1348 0 240 237 226 11 chr20 57834199 57834292 -8833713 + MIR3 SINE MIR 9 121 -87 2231 119 0 3 chr20 57834307 57834618 -8833387 - AluSx SINE Alu -2 310 1 292 349 34 20 chr20 57834625 57834774 -8833231 - L2 LINE L2 0 3272 3122 293 194 0 14 chr20 57834895 57834967 -8833038 + (TATATG)n Simple_repeat Simple_repeat 6 76 0 641 205 0 0 chr20 57835027 57835154 -8832851 - MIR SINE MIR -58 204 78 1440 138 13 0 chr20 57835243 57835468 -8832537 + AluJb SINE Alu 70 297 -15 231 313 74 0 chr20 57835515 57835633 -8832372 - L2 LINE L2 -260 3053 2928 1587 161 17 23 chr20 57836570 57836869 -8831136 + AluJo SINE Alu 1 297 -15 276 327 0 28 chr20 57836972 57837079 -8830926 + L1MC/D LINE L1 5722 5825 -1983 2036 115 10 3 chr20 57837143 57837448 -8830557 + AluSq SINE Alu 1 307 -6 355 316 31 0 chr20 57837577 57837675 -8830330 + L2 LINE L2 3213 3313 0 949 158 0 0 chr20 57837741 57837899 -8830106 - FRAM SINE Alu -18 158 1 1697 148 0 35 chr20 57837955 57838266 -8829739 + AluJo SINE Alu 1 300 -12 229 317 0 0 chr20 57839104 57839164 -8828841 + L2 LINE L2 3212 3271 -1 24 54 0 27 chr20 57839531 57839555 -8828450 + AT_rich Low_complexity Low_complexity 1 24 -48 2201 85 0 16 chr20 57839555 57839860 -8828145 - AluSx SINE Alu -12 300 1 24 54 0 27 chr20 57839860 57839889 -8828116 + AT_rich Low_complexity Low_complexity 24 54 -18 2162 107 0 0 chr20 57839889 57840179 -8827826 + AluSq SINE Alu 1 290 -23 24 54 0 27 chr20 57840179 57840198 -8827807 + AT_rich Low_complexity Low_complexity 54 72 0 240 309 31 0 chr20 57840300 57840397 -8827608 + MIR3 SINE MIR 82 181 -27 326 231 40 54 chr20 57840816 57840948 -8827057 - MIR3 SINE MIR -7 201 72 306 206 84 9 chr20 57841071 57841178 -8826827 - L1ME3A LINE L1 -88 6082 5968 1985 88 49 3 chr20 57841766 57842050 -8825955 + AluSx SINE Alu 1 297 -15 196 279 0 0 chr20 57842052 57842095 -8825910 - L2 LINE L2 -535 2779 2737 2243 212 120 3 chr20 57842100 57842690 -8825315 - LTR65 LTR ERV1 -3 666 8 262 314 15 45 chr20 57843088 57843240 -8824765 - MER5B DNA MER1_type -44 134 1 2142 99 3 0 chr20 57843395 57843689 -8824316 + AluSp SINE Alu 1 295 -18 209 254 0 18 chr20 57843774 57843829 -8824176 + C-rich Low_complexity Low_complexity 6 59 0 322 242 83 23 chr20 57844090 57844222 -8823783 + MER5A DNA MER1_type 18 157 -32 220 260 82 55 chr20 57844103 57844249 -8823756 - MER5B DNA MER1_type -23 155 6 * 861 146 0 0 chr20 57844820 57844957 -8823048 - FLAM_C SINE Alu -6 137 1 635 231 47 6 chr20 57845251 57845420 -8822585 - MER5B DNA MER1_type 0 178 3 1994 132 0 19 chr20 57845492 57845810 -8822195 + AluSx SINE Alu 1 312 0 2405 57 0 0 chr20 57846427 57846725 -8821280 + AluY SINE Alu 1 298 -13 851 183 99 44 chr20 57846725 57846968 -8821037 + MER96B DNA MER1_type? 158 417 0 244 139 47 0 chr20 57847374 57847417 -8820588 - L2 LINE L2 -561 2753 2709 6346 41 0 3 chr20 57847429 57848182 -8819823 + L1PA5 LINE L1 5396 6146 -8 23 0 0 0 chr20 57848209 57848232 -8819773 + AT_rich Low_complexity Low_complexity 1 23 0 198 0 0 0 chr20 57848232 57848254 -8819751 + (TAAAA)n Simple_repeat Simple_repeat 4 25 0 188 259 0 37 chr20 57848267 57848321 -8819684 + L2 LINE L2 3258 3309 -4 185 286 16 48 chr20 57848364 57848427 -8819578 + L2 LINE L2 3212 3272 0 2115 89 27 0 chr20 57848598 57848890 -8819115 - AluSp SINE Alu -13 300 1 1298 165 0 0 chr20 57849318 57849530 -8818475 + AluSq SINE Alu 1 212 -101 377 103 17 0 chr20 57849530 57849588 -8818417 + AluSg/x SINE Alu 76 134 -166 215 241 19 0 chr20 57849763 57849817 -8818188 + MIR SINE MIR 174 228 -34 23 33 0 0 chr20 57851970 57852000 -8816005 + AT_rich Low_complexity Low_complexity 1 30 0 1284 183 65 14 chr20 57852173 57852463 -8815542 + AluJo SINE Alu 1 305 -7 2128 114 0 0 chr20 57852476 57852774 -8815231 + AluSx SINE Alu 12 309 -3 466 224 50 48 chr20 57853593 57853943 -8814062 - MER113 DNA MER1_type? -109 412 5 232 284 15 15 chr20 57854005 57854072 -8813933 - MIR SINE MIR -115 93 27 806 201 10 62 chr20 57854152 57854214 -8813791 - MER5A DNA MER1_type -1 188 124 2324 93 0 3 chr20 57854214 57854527 -8813478 + AluSq SINE Alu 1 312 -1 806 201 10 62 chr20 57854527 57854658 -8813347 - MER5A DNA MER1_type -65 124 5 285 261 23 11 chr20 57854743 57854831 -8813174 - MER20B DNA MER1_type -650 133 45 1969 131 0 3 chr20 57854944 57855241 -8812764 - AluSx SINE Alu -16 296 1 1750 159 3 26 chr20 57855244 57855552 -8812453 - AluJb SINE Alu -11 301 1 27 0 0 65 chr20 57856084 57856130 -8811875 + AT_rich Low_complexity Low_complexity 1 43 0 2019 141 3 3 chr20 57856298 57856603 -8811402 + AluSq SINE Alu 1 305 -8 26 74 0 0 chr20 57856674 57856728 -8811277 + AT_rich Low_complexity Low_complexity 1 54 0 1255 113 0 0 chr20 57857620 57857797 -8810208 - AluSx SINE Alu -15 297 121 993 81 7 0 chr20 57858198 57858334 -8809671 - AluSx SINE Alu -174 138 2 537 274 85 24 chr20 57858349 57858513 -8809492 - L2 LINE L2 0 3313 3140 588 91 0 0 chr20 57858844 57858921 -8809084 - MADE1 DNA Mariner -3 77 1 548 265 32 32 chr20 57859558 57859743 -8808262 - MLT1K LTR MaLR 0 588 404 1195 240 39 41 chr20 57859974 57860079 -8807926 - LTR40a LTR ERVL -2 517 413 3257 181 7 4 chr20 57860079 57860637 -8807368 - MER68 LTR ERV1 0 562 3 1195 240 39 41 chr20 57860637 57860869 -8807136 - LTR40a LTR ERVL -106 413 181 300 163 61 10 chr20 57860870 57860968 -8807037 + (TA)n Simple_repeat Simple_repeat 1 103 0 844 188 0 13 chr20 57860971 57861125 -8806880 - FRAM SINE Alu -32 144 1 889 164 5 44 chr20 57861127 57861310 -8806695 - LTR40a LTR ERVL -284 235 3 1590 192 0 19 chr20 57861360 57861668 -8806337 + AluJo SINE Alu 1 302 -10 400 267 44 15 chr20 57862441 57862576 -8805429 - L2 LINE L2 -1 3312 3174 579 196 7 20 chr20 57862583 57862731 -8805274 - MER96B DNA MER1_type? -18 399 254 487 312 139 7 chr20 57862736 57863093 -8804912 - L2 LINE L2 -158 3155 2764 2110 135 116 0 chr20 57863239 57863594 -8804411 - MSTD LTR MaLR 0 396 1 1057 53 0 0 chr20 57863717 57863848 -8804157 + AluSg SINE Alu 1 131 -179 2017 133 0 3 chr20 57863853 57864162 -8803843 + AluSg SINE Alu 3 310 0 219 368 9 18 chr20 57864536 57864650 -8803355 + MIR SINE MIR 145 257 -5 320 371 51 11 chr20 57864876 57865051 -8802954 + MIR SINE MIR 67 248 -14 364 273 61 0 chr20 57865190 57865289 -8802716 + MIR SINE MIR 59 163 -99 334 269 34 42 chr20 57865384 57865436 -8802569 - L2 LINE L2 -38 3275 3224 2068 110 0 3 chr20 57865436 57865737 -8802268 + AluSx SINE Alu 1 300 -12 334 269 34 42 chr20 57865737 57865803 -8802202 - L2 LINE L2 -89 3224 3158 243 0 0 0 chr20 57866043 57866070 -8801935 + (CATA)n Simple_repeat Simple_repeat 2 28 0 1436 163 4 19 chr20 57866075 57866339 -8801666 - AluJo SINE Alu -32 280 21 21 0 0 0 chr20 57866347 57866368 -8801637 + AT_rich Low_complexity Low_complexity 1 21 0 209 148 0 37 chr20 57867091 57867145 -8800860 + (CCCCG)n Simple_repeat Simple_repeat 5 56 0 595 220 121 11 chr20 57867495 57867677 -8800328 - MIR SINE MIR -11 251 50 280 305 236 25 chr20 57867740 57867943 -8800062 + L2 LINE L2 3027 3272 0 348 321 82 19 chr20 57867961 57868120 -8799885 - MIR SINE MIR -81 181 13 512 285 298 11 chr20 57868195 57868698 -8799307 + L2 LINE L2 2661 3313 0 443 243 75 0 chr20 57868961 57869068 -8798937 - L2 LINE L2 -4 3309 3195 2592 233 122 31 chr20 57869076 57869849 -8798156 + MER21B LTR ERV1 5 847 -16 2253 64 0 0 chr20 57869853 57870159 -8797846 + AluY SINE Alu 1 306 0 615 164 117 0 chr20 57870350 57870478 -8797527 + MIR SINE MIR 102 244 -18 1556 159 23 10 chr20 57870509 57870810 -8797195 + AluJo SINE Alu 1 305 -7 1529 193 30 0 chr20 57871424 57871724 -8796281 + AluJb SINE Alu 1 309 -3 1441 161 15 30 chr20 57872168 57872435 -8795570 + AluJb SINE Alu 1 263 -49 487 229 32 128 chr20 57872443 57872692 -8795313 - Charlie8 DNA MER1_type -1008 1409 98 2148 114 0 0 chr20 57872765 57873063 -8794942 + AluSq SINE Alu 1 298 -15 223 316 76 13 chr20 57873895 57873974 -8794031 - MIR SINE MIR -102 106 23 421 257 10 0 chr20 57874209 57874310 -8793695 + U13 snRNA snRNA 1 102 -2 21 0 0 0 chr20 57874805 57874826 -8793179 + AT_rich Low_complexity Low_complexity 1 21 0 2417 74 3 0 chr20 57875054 57875365 -8792640 - AluSp SINE Alu -1 312 1 21 36 0 0 chr20 57876076 57876104 -8791901 + AT_rich Low_complexity Low_complexity 1 28 0 1131 178 182 23 chr20 57876110 57876368 -8791637 - AluJo SINE Alu 0 302 4 14845 128 23 25 chr20 57876656 57876780 -8791225 - Tigger1 DNA MER2_type 0 2418 2295 1658 139 24 35 chr20 57876780 57877068 -8790937 + AluJo SINE Alu 8 292 -20 14845 128 23 25 chr20 57877068 57877780 -8790225 - Tigger1 DNA MER2_type -123 2295 1583 2091 122 3 0 chr20 57877780 57878091 -8789914 - AluSx SINE Alu 0 312 1 14845 128 23 25 chr20 57878091 57879653 -8788352 - Tigger1 DNA MER2_type -835 1583 24 180 111 0 0 chr20 57880146 57880173 -8787832 + (TG)n Simple_repeat Simple_repeat 2 28 0 201 195 0 0 chr20 57880176 57880217 -8787788 + (CATATA)n Simple_repeat Simple_repeat 1 41 0 1416 143 136 4 chr20 57880225 57880483 -8787522 - L1MB5 LINE L1 -9 6165 5874 2140 144 28 0 chr20 57880741 57881067 -8786938 + MER2 DNA MER2_type 3 337 -8 463 308 146 16 chr20 57881632 57881904 -8786101 - L1MB5 LINE L1 -2018 5790 5555 1265 185 86 58 chr20 57881904 57882196 -8785809 - AluJo SINE Alu -2 300 1 463 308 146 16 chr20 57882196 57882348 -8785657 - L1MB5 LINE L1 -2253 5555 5311 301 308 98 30 chr20 57883138 57883271 -8784734 + L2 LINE L2 3117 3258 -14 606 317 121 27 chr20 57883534 57884085 -8783920 - L2 LINE L2 -20 3293 2698 182 275 0 0 chr20 57884368 57884408 -8783597 - L2 LINE L2 -87 3185 3146 669 230 145 36 chr20 57884707 57884933 -8783072 - MER113 DNA MER1_type? -124 397 127 2104 110 0 0 chr20 57884933 57885245 -8782760 + AluSx SINE Alu 1 312 0 669 230 145 36 chr20 57885245 57885321 -8782684 - MER113 DNA MER1_type? -394 127 61 1591 174 45 63 chr20 57886216 57886613 -8781392 - MLT1B LTR MaLR 0 390 1 2163 113 0 0 chr20 57886645 57886938 -8781067 + AluSx SINE Alu 1 293 -19 222 235 0 37 chr20 57887428 57887509 -8780496 + (CCTG)n Simple_repeat Simple_repeat 2 79 0 2013 110 0 33 chr20 57887630 57887930 -8780075 - AluSg SINE Alu -20 290 1 300 298 32 0 chr20 57888073 57888167 -8779838 + MIR SINE MIR 44 140 -122 255 226 19 0 chr20 57889032 57889043 -8778962 + MER3 DNA MER1_type 37 48 -161 683 205 29 73 chr20 57889043 57889099 -8778906 - MER3 DNA MER1_type 0 209 152 2215 89 0 7 chr20 57889099 57889403 -8778602 + AluSp SINE Alu 1 302 -11 683 205 29 73 chr20 57889403 57889551 -8778454 - MER3 DNA MER1_type -57 152 14 1166 133 0 0 chr20 57890777 57890943 -8777062 - AluJb SINE Alu -145 167 2 890 114 0 23 chr20 57891004 57891135 -8776870 + FLAM_C SINE Alu 1 128 -5 338 265 0 24 chr20 57891250 57891333 -8776672 - MIR SINE MIR -74 188 108 2117 101 0 0 chr20 57891462 57891750 -8776255 + AluSc SINE Alu 1 288 -21 1783 162 7 3 chr20 57891942 57892239 -8775766 + AluJo SINE Alu 1 298 -14 417 258 61 8 chr20 57892522 57892654 -8775351 + MIR SINE MIR 52 190 -72 298 202 71 12 chr20 57893525 57893609 -8774396 + L1ME3A LINE L1 6077 6165 -5 259 267 33 0 chr20 57894521 57894581 -8773424 + L2 LINE L2 3210 3271 -1 2028 99 0 0 chr20 57894832 57895116 -8772889 + AluSx SINE Alu 1 284 -28 249 83 0 0 chr20 57895116 57895152 -8772853 + (CAAT)n Simple_repeat Simple_repeat 2 37 0 406 303 41 14 chr20 57896308 57896453 -8771552 - L1ME1 LINE L1 -76 6090 5942 935 173 112 9 chr20 57896458 57896672 -8771333 - L1ME LINE L1 -564 5602 5367 409 179 5 4 chr20 57896855 57897075 -8770930 + AluJo SINE Alu 1 298 -14 2108 74 56 7 chr20 57897761 57898046 -8769959 - AluSg SINE Alu -10 300 2 2073 110 3 19 chr20 57898287 57898604 -8769401 - AluSx SINE Alu 0 312 1 2125 113 7 0 chr20 57898610 57898920 -8769085 - AluSq SINE Alu -1 312 1 851 174 116 6 chr20 57899357 57899529 -8768476 - AluJb SINE Alu -22 290 100 358 182 0 0 chr20 57899563 57899629 -8768376 - L1MA5A LINE L1 -10 6287 6222 990 143 0 91 chr20 57900222 57900453 -8767552 + AluJb SINE Alu 87 296 -16 227 354 71 9 chr20 57901398 57901610 -8766395 + MIR SINE MIR 18 242 -20 1771 145 3 21 chr20 57902247 57902530 -8765475 + AluSx SINE Alu 1 278 -34 234 150 0 0 chr20 57902530 57902570 -8765435 + (CA)n Simple_repeat Simple_repeat 2 41 0 1717 167 3 7 chr20 57903772 57904084 -8763921 + AluJo SINE Alu 2 312 0 295 264 116 8 chr20 57904706 57904827 -8763178 - L2 LINE L2 0 3313 3180 300 240 169 78 chr20 57905168 57905272 -8762733 - L1ME1 LINE L1 -216 5905 5781 2369 61 0 0 chr20 57905272 57905566 -8762439 - AluY SINE Alu -17 294 1 300 240 169 78 chr20 57905566 57905615 -8762390 - L1ME1 LINE L1 -340 5781 5738 408 314 30 38 chr20 57905906 57906142 -8761863 - Charlie8 DNA MER1_type -2152 265 32 3749 190 89 25 chr20 57907199 57907902 -8760103 + L1MB7 LINE L1 4751 5408 -776 2042 104 24 3 chr20 57907902 57908200 -8759805 + AluSx SINE Alu 1 304 -8 3749 190 89 25 chr20 57908200 57908832 -8759173 + L1MB7 LINE L1 5408 6184 0 1919 124 0 42 chr20 57909224 57909530 -8758475 + AluJb SINE Alu 1 293 -19 39 50 0 0 chr20 57909676 57909736 -8758269 + AT_rich Low_complexity Low_complexity 1 60 0 1839 140 81 0 chr20 57909749 57910057 -8757948 + MER1B DNA MER1_type 5 337 0 1012 179 36 0 chr20 57910152 57910347 -8757658 - MER20 DNA MER1_type 0 219 18 2062 98 0 46 chr20 57910407 57910713 -8757292 - AluSx SINE Alu -20 292 1 407 301 0 23 chr20 57910718 57910851 -8757154 - MIR SINE MIR -60 148 19 275 189 14 68 chr20 57910879 57910953 -8757052 - L2 LINE L2 -25 3288 3219 1754 231 67 35 chr20 57911179 57911720 -8756285 - MER68 LTR ERV1 0 562 5 1013 99 59 0 chr20 57913465 57913617 -8754388 + AluSc SINE Alu 133 293 -16 2014 117 0 0 chr20 57913856 57914138 -8753867 + AluSx SINE Alu 1 282 -30 228 35 0 0 chr20 57914138 57914167 -8753838 + (GA)n Simple_repeat Simple_repeat 2 30 0 420 140 0 0 chr20 57914167 57914260 -8753745 + (CA)n Simple_repeat Simple_repeat 1 93 0 1964 134 0 10 chr20 57918123 57918422 -8749583 - AluJb SINE Alu -5 307 12 180 178 41 123 chr20 57918925 57918998 -8749007 - MIR SINE MIR -61 147 81 4771 148 32 28 chr20 57919245 57920221 -8747784 - MER11C LTR ERVK 0 1071 1 1117 204 108 22 chr20 57920563 57920832 -8747173 + AluJo SINE Alu 1 292 -10 1938 122 10 10 chr20 57921231 57921534 -8746471 - AluSx SINE Alu -9 303 1 1945 132 14 0 chr20 57922035 57922330 -8745675 - AluSx SINE Alu -13 299 1 485 244 139 34 chr20 57922400 57922609 -8745396 - Charlie8 DNA MER1_type -2141 276 46 2013 108 24 0 chr20 57922614 57922910 -8745095 + AluSp SINE Alu 1 303 -10 546 198 9 36 chr20 57924201 57924312 -8743693 - MER58B DNA MER1_type 0 341 234 803 101 42 0 chr20 57925227 57925346 -8742659 + AluSg/x SINE Alu 177 300 -12 752 162 0 0 chr20 57925352 57925469 -8742536 + FLAM_C SINE Alu 2 118 -25 1192 219 128 8 chr20 57925641 57926001 -8742004 - L1MC4a LINE L1 -698 7110 6708 388 298 26 0 chr20 57926018 57926132 -8741873 - MLT1D LTR MaLR -366 139 23 2175 118 0 0 chr20 57926391 57926697 -8741308 + AluSx SINE Alu 1 306 -6 810 223 0 0 chr20 57926700 57926866 -8741139 + AluJb SINE Alu 134 299 -13 1506 186 7 33 chr20 57926877 57927178 -8740827 + AluJb SINE Alu 1 293 -19 1001 184 102 98 chr20 57927178 57927493 -8740512 + MER21A LTR ERV1 88 403 -528 2049 130 3 0 chr20 57927493 57927792 -8740213 + AluSx SINE Alu 1 300 -12 2142 114 7 0 chr20 57927801 57928109 -8739896 + AluSx SINE Alu 1 310 -2 2061 112 14 0 chr20 57928113 57928426 -8739579 + AluSx SINE Alu 1 317 0 1043 165 0 0 chr20 57928427 57928609 -8739396 + AluSg/x SINE Alu 123 304 -8 666 167 0 0 chr20 57928610 57928742 -8739263 + (CCCA)n Simple_repeat Simple_repeat 2 133 0 209 282 47 47 chr20 57928744 57928829 -8739176 - L2 LINE L2 0 3272 3188 1747 139 10 46 chr20 57929072 57929375 -8738630 - AluSx SINE Alu -20 292 1 2325 95 0 6 chr20 57929852 57930167 -8737838 - AluSp SINE Alu 0 313 1 1843 153 0 10 chr20 57930197 57930492 -8737513 - AluSx SINE Alu -17 295 4 2134 132 0 0 chr20 57930531 57930841 -8737164 - AluSx SINE Alu -2 310 1 2386 88 0 0 chr20 57931041 57931348 -8736657 - AluSc SINE Alu -2 307 1 329 205 79 79 chr20 57931352 57931479 -8736526 - Charlie8 DNA MER1_type -2265 152 26 1904 128 17 0 chr20 57932441 57932729 -8735276 + AluSx SINE Alu 1 293 -19 2167 87 0 42 chr20 57932899 57933035 -8734970 + AluSx SINE Alu 1 141 -171 2274 82 3 0 chr20 57933035 57933339 -8734666 + AluSg SINE Alu 1 305 -5 2229 75 17 0 chr20 57933339 57933631 -8734374 + AluSp SINE Alu 1 298 -15 2167 87 0 42 chr20 57933631 57933802 -8734203 + AluSx SINE Alu 139 296 -16 794 159 62 80 chr20 57933802 57933876 -8734129 + AluSg/x SINE Alu 134 208 -104 2207 88 3 0 chr20 57933876 57934171 -8733834 + AluSx SINE Alu 1 296 -16 794 159 62 80 chr20 57934171 57934272 -8733733 + AluSg/x SINE Alu 208 306 -6 1184 192 42 0 chr20 57934412 57934626 -8733379 - MER58A DNA MER1_type -1 223 1 829 131 0 83 chr20 57935594 57935739 -8732266 + FLAM_C SINE Alu 1 133 0 2066 104 4 0 chr20 57935951 57936254 -8731751 + AluSc SINE Alu 1 304 0 702 179 0 0 chr20 57936832 57936949 -8731056 + FLAM_A SINE Alu 1 117 -16 200 172 17 0 chr20 57936949 57937007 -8730998 + (TA)n Simple_repeat Simple_repeat 1 59 0 557 200 52 0 chr20 57937007 57937122 -8730883 + MER58B DNA MER1_type 124 244 -97 479 197 63 39 chr20 57937125 57937252 -8730753 + MER58B DNA MER1_type 211 340 -1 1824 119 8 0 chr20 57937285 57937553 -8730452 + AluSq SINE Alu 1 270 -43 1075 88 0 0 chr20 57937564 57937701 -8730304 - AluSq/x SINE Alu -176 137 1 1002 158 71 27 chr20 57937701 57937883 -8730122 - AluJb SINE Alu -122 190 1 850 158 0 0 chr20 57938268 57938407 -8729598 + AluJb SINE Alu 1 128 -184 210 162 0 0 chr20 57938438 57938475 -8729530 + A-rich Low_complexity Low_complexity 1 37 0 1159 140 26 21 chr20 57938479 57938652 -8729353 + AluJb SINE Alu 118 294 -18 2208 123 3 19 chr20 57938652 57938969 -8729036 + AluSx SINE Alu 1 312 0 1159 140 26 21 chr20 57938969 57938988 -8729017 + AluJb SINE Alu 294 311 -1 302 207 26 112 chr20 57939409 57939468 -8728537 + MLT1E3 LTR MaLR 2 48 -606 2327 91 7 3 chr20 57939468 57939776 -8728229 - AluSp SINE Alu -4 309 1 302 207 26 112 chr20 57939776 57939832 -8728173 + MLT1E3 LTR MaLR 48 107 -547 1065 242 43 15 chr20 57939865 57940233 -8727772 + MLT1E3 LTR MaLR 202 617 -7 519 244 52 0 chr20 57940485 57940620 -8727385 - L1MD2 LINE L1 -13 6346 6205 251 276 26 0 chr20 57940630 57940706 -8727299 - L1MD2 LINE L1 -213 6146 6069 1989 128 21 0 chr20 57940707 57940988 -8727017 + AluJb SINE Alu 1 287 -25 1414 234 94 5 chr20 57941064 57941448 -8726557 - L1MD2 LINE L1 -337 6022 5605 2372 116 8 44 chr20 57941489 57941878 -8726127 + THE1C LTR MaLR 1 375 0 434 243 87 44 chr20 57942128 57942334 -8725671 + L2 LINE L2 2910 3124 -189 222 111 0 0 chr20 57942336 57942347 -8725658 + (T)n Simple_repeat Simple_repeat 1 11 -25 1387 25 0 0 chr20 57942347 57942509 -8725496 - L1PA2 LINE L1 0 6155 5994 222 111 0 0 chr20 57942509 57942533 -8725472 + (T)n Simple_repeat Simple_repeat 10 36 0 1951 185 68 70 chr20 57942611 57943093 -8724912 + MER21B LTR ERV1 1 481 -382 1157 46 0 0 chr20 57943103 57943233 -8724772 + AluSc SINE Alu 1 130 -179 2078 91 0 0 chr20 57943233 57943513 -8724492 + AluY SINE Alu 27 306 0 1226 204 80 4 chr20 57943518 57943782 -8724223 + MER21B LTR ERV1 499 782 -81 2395 109 0 0 chr20 57943856 57944167 -8723838 - AluSx SINE Alu -1 311 1 354 301 0 12 chr20 57944183 57944266 -8723739 + L2 LINE L2 3176 3257 -15 2198 114 3 19 chr20 57944269 57944586 -8723419 - AluSx SINE Alu 0 312 1 2667 32 0 16 chr20 57944609 57944918 -8723087 + AluY SINE Alu 2 305 -6 747 248 153 25 chr20 57944922 57945196 -8722809 - L1MD3 LINE L1 -32 7963 7655 1992 149 7 3 chr20 57945284 57945586 -8722419 - AluSx SINE Alu -9 303 1 1895 181 0 7 chr20 57945604 57945902 -8722103 - AluJo SINE Alu -16 296 1 1991 130 43 27 chr20 57945902 57946270 -8721735 - Tigger2a DNA MER2_type -60 374 1 2602 241 43 59 chr20 57946289 57947324 -8720681 - L1MC4a LINE L1 -342 7466 6448 2958 89 10 0 chr20 57947324 57947729 -8720276 + MSTA LTR MaLR 1 409 -19 488 213 71 85 chr20 57947739 57947890 -8720115 - L1MC4a LINE L1 -1357 6451 6302 2193 111 3 7 chr20 57947890 57948187 -8719818 + AluSx SINE Alu 1 296 -16 488 213 71 85 chr20 57948187 57948246 -8719759 - L1MC4a LINE L1 -1506 6302 6244 1125 180 0 32 chr20 57948246 57948463 -8719542 - AluJb SINE Alu 0 312 103 351 136 51 0 chr20 57948464 57948523 -8719482 - L1MC4a LINE L1 -1561 6247 6186 2313 116 0 0 chr20 57948552 57948855 -8719150 + AluSx SINE Alu 1 303 -9 1219 287 10 13 chr20 57948857 57949244 -8718761 - L1MC4a LINE L1 -1893 5915 5530 2029 109 10 17 chr20 57949512 57949805 -8718200 - AluJb SINE Alu -13 299 9 356 238 79 165 chr20 57949885 57950376 -8717629 - L2 LINE L2 0 3313 2865 4605 56 4 0 chr20 57950591 57951143 -8716862 + MER41A LTR ERV1 1 554 0 2238 137 0 0 chr20 57951362 57951669 -8716336 + AluSx SINE Alu 1 307 -5 247 322 165 19 chr20 57951764 57952025 -8715980 - L2 LINE L2 0 3313 3015 249 200 60 0 chr20 57952191 57952241 -8715764 + MIR SINE MIR 209 261 -1 31 26 0 0 chr20 57952281 57952319 -8715686 + AT_rich Low_complexity Low_complexity 1 38 0 2032 153 3 0 chr20 57952381 57952681 -8715324 - AluJo SINE Alu -11 301 1 413 241 85 68 chr20 57952705 57952835 -8715170 + MER34 LTR ERV1 223 349 -193 2129 108 17 0 chr20 57952835 57953122 -8714883 + AluSx SINE Alu 1 292 -20 413 241 85 68 chr20 57953122 57953298 -8714707 + MER34 LTR ERV1 349 534 -8 301 223 85 0 chr20 57953333 57953427 -8714578 - L1ME LINE L1 -309 5812 5711 485 181 27 20 chr20 57953880 57954029 -8713976 + L1M4 LINE L1 5103 5252 -894 341 118 0 88 chr20 57954030 57954098 -8713907 - MLT1A2 LTR MaLR 0 374 313 667 261 59 26 chr20 57954100 57954181 -8713824 - MER2 DNA MER2_type 0 345 268 2258 102 10 7 chr20 57954181 57954486 -8713519 + AluSx SINE Alu 1 306 -6 667 261 59 26 chr20 57954486 57954676 -8713329 - MER2 DNA MER2_type -77 268 65 2254 127 0 0 chr20 57954677 57954984 -8713021 - AluSx SINE Alu 0 312 6 428 313 103 18 chr20 57955164 57955388 -8712617 + MIR SINE MIR 1 243 -19 1887 173 3 3 chr20 57955583 57955884 -8712121 + AluJb SINE Alu 1 301 -11 2044 140 19 7 chr20 57956041 57956349 -8711656 + AluJb SINE Alu 1 312 0 2266 83 10 0 chr20 57956364 57956653 -8711352 + AluSx SINE Alu 1 292 -20 657 204 105 0 chr20 57956673 57956825 -8711180 + L1MB7 LINE L1 5887 6054 -130 1070 179 0 7 chr20 57956825 57957063 -8710942 - AluJb SINE Alu -22 290 1 2406 87 0 3 chr20 57957071 57957369 -8710636 - AluSx SINE Alu -15 297 1 26 0 0 0 chr20 57957986 57958012 -8709993 + AT_rich Low_complexity Low_complexity 1 26 0 745 219 17 110 chr20 57958129 57958198 -8709807 - MLT1C LTR MaLR -2 465 391 1772 93 137 22 chr20 57958198 57958468 -8709537 + AluSx SINE Alu 1 301 -11 745 219 17 110 chr20 57958468 57958690 -8709315 - MLT1C LTR MaLR -76 391 201 1853 163 0 7 chr20 57958694 57958994 -8709011 - AluJb SINE Alu -14 298 1 915 60 8 30 chr20 57959028 57959161 -8708844 - L1PA13 LINE L1 -11 6152 6023 1325 95 0 0 chr20 57959161 57959330 -8708675 - AluSp SINE Alu -8 305 137 2404 76 12 0 chr20 57959331 57959661 -8708344 - L1PA12 LINE L1 -132 6036 5703 720 177 51 23 chr20 57959662 57959837 -8708168 - MLT1C LTR MaLR -287 180 1 231 200 25 62 chr20 57959837 57959917 -8708088 - L1M4 LINE L1 -1516 4630 4554 2481 87 0 0 chr20 57959917 57960227 -8707778 - AluSx SINE Alu -1 311 2 403 256 43 77 chr20 57960230 57960248 -8707757 - L1M4 LINE L1 -1701 4445 4428 2303 107 7 3 chr20 57960248 57960558 -8707447 - AluSx SINE Alu -1 311 1 403 256 43 77 chr20 57960558 57960667 -8707338 - L1M4 LINE L1 -1718 4428 4317 2188 129 0 0 chr20 57960667 57960978 -8707027 - AluSx SINE Alu -1 311 1 403 256 43 77 chr20 57960978 57961111 -8706894 - L1M4 LINE L1 -1829 4317 4193 2249 97 7 3 chr20 57961266 57961565 -8706440 + AluSg SINE Alu 1 300 -10 2348 97 3 3 chr20 57961614 57961922 -8706083 - AluSp SINE Alu -5 308 1 240 218 0 18 chr20 57962104 57962159 -8705846 + (TATG)n Simple_repeat Simple_repeat 2 55 0 976 120 0 0 chr20 57962183 57962316 -8705689 - FLAM_C SINE Alu 0 133 1 1796 177 7 3 chr20 57962322 57962616 -8705389 - AluSx SINE Alu -17 295 1 2352 89 0 0 chr20 57962945 57963238 -8704767 + AluSq SINE Alu 3 295 -18 2204 106 0 3 chr20 57963390 57963697 -8704308 + AluSx SINE Alu 1 306 0 393 204 56 19 chr20 57964137 57964245 -8703760 - MER58B DNA MER1_type -6 335 224 311 194 30 0 chr20 57964274 57964341 -8703664 + MER58B DNA MER1_type 270 338 -3 641 211 16 0 chr20 57964374 57964497 -8703508 - FLAM_A SINE Alu -8 125 1 1750 70 9 0 chr20 57964510 57964723 -8703282 - AluSg/x SINE Alu -12 300 86 34 0 0 22 chr20 57965750 57965773 -8702232 + AT_rich Low_complexity Low_complexity 1 24 -20 2434 64 14 0 chr20 57965773 57966068 -8701937 - AluSp SINE Alu -14 299 1 34 0 0 22 chr20 57966068 57966089 -8701916 + AT_rich Low_complexity Low_complexity 24 44 0 1997 140 17 0 chr20 57966136 57966429 -8701576 - AluSx SINE Alu -14 298 1 2103 118 10 7 chr20 57966436 57966740 -8701265 - AluJb SINE Alu -7 305 1 338 179 0 15 chr20 57966742 57966809 -8701196 - MER2 DNA MER2_type -278 67 2 * 535 214 168 81 chr20 57966809 57967058 -8700947 - MER57B LTR ERV1 -137 266 1 666 284 62 53 chr20 57967058 57967396 -8700609 - MER57-int LTR ERV1 -393 7144 6804 2152 143 0 3 chr20 57967712 57968020 -8699985 - AluSx SINE Alu -5 307 1 2167 98 24 20 chr20 57968086 57968383 -8699622 - AluSg SINE Alu -12 298 1 2287 81 27 13 chr20 57968875 57969173 -8698832 + AluSp SINE Alu 2 303 -10 975 122 0 17 chr20 57969173 57969187 -8698818 + (GGAA)n Simple_repeat Simple_repeat 1 190 0 975 122 0 17 chr20 57969187 57969367 -8698638 + (GGAA)n Simple_repeat Simple_repeat 2 178 0 496 287 37 33 chr20 57969553 57969797 -8698208 + L1MC4a LINE L1 5581 5825 -1983 1974 158 6 10 chr20 57969799 57970110 -8697895 + AluSx SINE Alu 1 310 -2 1945 138 19 39 chr20 57970227 57970538 -8697467 + AluJo SINE Alu 1 305 -7 2017 122 56 0 chr20 57970674 57970962 -8697043 - AluSx SINE Alu -8 304 1 490 255 185 0 chr20 57971097 57971254 -8696751 - MIR SINE MIR -46 216 31 281 319 64 0 chr20 57971298 57971392 -8696613 + MIR SINE MIR 50 149 -113 264 233 17 0 chr20 57971672 57971732 -8696273 + CT-rich Low_complexity Low_complexity 3 63 0 954 292 136 84 chr20 57972237 57973488 -8694517 + L2 LINE L2 1525 2840 -474 308 125 0 0 chr20 57973497 57973545 -8694460 - AluS SINE Alu -226 77 30 297 167 24 12 chr20 57973567 57973651 -8694354 + CT-rich Low_complexity Low_complexity 3 87 0 2330 96 0 13 chr20 57973927 57974063 -8693942 + AluSq SINE Alu 1 137 -176 2458 84 3 0 chr20 57974063 57974361 -8693644 + AluSp SINE Alu 1 299 -14 2330 96 0 13 chr20 57974361 57974526 -8693479 + AluSq SINE Alu 137 298 -15 183 80 0 0 chr20 57974533 57974558 -8693447 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 230 287 35 23 chr20 57974644 57974731 -8693274 - MIR3 SINE MIR -1 207 120 258 32 0 0 chr20 57974888 57974919 -8693086 + (TTTTA)n Simple_repeat Simple_repeat 1 31 0 2471 77 3 0 chr20 57975305 57975604 -8692401 + AluY SINE Alu 1 300 -11 2032 123 0 11 chr20 57975604 57975912 -8692093 + AluSx SINE Alu 1 305 0 750 139 90 8 chr20 57975917 57976039 -8691966 + AluJo SINE Alu 1 132 -170 258 200 0 0 chr20 57976054 57976099 -8691906 - MIR3 SINE MIR -53 155 111 2282 110 13 0 chr20 57976126 57976434 -8691571 + AluSp SINE Alu 1 312 -1 262 266 28 64 chr20 57976708 57976817 -8691188 - MIR3 SINE MIR -34 174 70 406 249 99 11 chr20 57976915 57977094 -8690911 - MIR SINE MIR -49 213 16 2198 110 4 0 chr20 57978228 57978538 -8689467 - AluSx SINE Alu 0 311 1 779 271 78 23 chr20 57978654 57979129 -8688876 + L1M4 LINE L1 2830 3312 -2834 991 207 0 0 chr20 57979144 57979318 -8688687 + AluJo SINE Alu 120 293 -19 271 287 85 49 chr20 57979327 57979587 -8688418 + L1M4 LINE L1 3340 3589 -2557 1442 140 108 99 chr20 57979587 57979627 -8688378 - THE1C LTR MaLR 0 375 337 2436 80 7 0 chr20 57979627 57979926 -8688079 + AluSp SINE Alu 1 301 -12 1442 140 108 99 chr20 57979926 57980257 -8687748 - THE1C LTR MaLR -38 337 1 271 287 85 49 chr20 57980257 57980269 -8687736 + L1M4 LINE L1 3589 3599 -2547 2098 146 0 0 chr20 57980269 57980564 -8687441 - AluSx SINE Alu -16 296 2 271 287 85 49 chr20 57980564 57980692 -8687313 + L1M4 LINE L1 3599 3761 -2385 646 247 69 44 chr20 57980853 57980894 -8687111 + L1MC4a LINE L1 6447 6485 -1323 2390 92 0 29 chr20 57980894 57981210 -8686795 - AluY SINE Alu -4 307 1 646 247 69 44 chr20 57981210 57981443 -8686562 + L1MC4a LINE L1 6485 6728 -1080 2015 116 0 7 chr20 57981443 57981718 -8686287 + AluSx SINE Alu 31 303 -9 247 68 68 0 chr20 57981718 57981762 -8686243 + MLT1F LTR MaLR 493 539 -3 736 231 118 0 chr20 57982174 57982343 -8685662 + MER5A DNA MER1_type 1 189 0 2332 50 7 4 chr20 57982629 57982935 -8685070 - AluY SINE Alu 0 311 5 421 215 11 11 chr20 57983232 57983325 -8684680 - MER57-int LTR ERV1 -1394 6143 6051 773 135 0 9 chr20 57983327 57983438 -8684567 + AluSq/x SINE Alu 2 111 -202 890 191 118 23 chr20 57983457 57983677 -8684328 - MSTA LTR MaLR 0 428 188 2357 108 0 6 chr20 57983677 57983992 -8684013 - AluSp SINE Alu 0 313 1 3097 112 26 0 chr20 57983993 57984448 -8683557 + MER57-int LTR ERV1 5744 6210 -1327 2366 107 0 7 chr20 57984449 57984759 -8683246 - AluSx SINE Alu -2 310 3 472 206 22 0 chr20 57984790 57984882 -8683123 - MIR SINE MIR -105 157 64 634 180 281 0 chr20 57984992 57985131 -8682874 + FAM SINE Alu 1 48 -1 195 139 0 0 chr20 57986101 57986137 -8681868 + (TG)n Simple_repeat Simple_repeat 1 36 0 23 0 0 0 chr20 57987419 57987442 -8680563 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr20 57988027 57988048 -8679957 + (TC)n Simple_repeat Simple_repeat 2 22 0 2328 64 3 14 chr20 57988319 57988616 -8679389 + AluY SINE Alu 1 294 -17 4735 23 0 0 chr20 57988616 57989183 -8678822 - L1P LINE L1 -1817 4329 3763 * 5199 23 0 1 chr20 57989180 57989785 -8678220 + L1PA3 LINE L1 5547 6150 -5 395 268 32 8 chr20 57990111 57990234 -8677771 + L2 LINE L2 3188 3313 0 706 230 5 27 chr20 57990958 57991145 -8676860 - MLT1D LTR MaLR -19 486 304 917 265 26 66 chr20 57991335 57991761 -8676244 - MLT1D LTR MaLR -61 444 36 1166 241 8 0 chr20 57991768 57992004 -8676001 + MER8 DNA MER2_type 2 239 0 243 277 0 0 chr20 57992004 57992069 -8675936 + (TA)n Simple_repeat Simple_repeat 2 66 0 24 0 0 0 chr20 57992790 57992814 -8675191 + AT_rich Low_complexity Low_complexity 1 24 0 257 162 176 0 chr20 57992907 57992975 -8675030 - MLT2F LTR ERVL -3 660 581 1885 192 39 5 chr20 57992989 57993748 -8674257 + L1M1 LINE L1 3238 4023 -3542 2011 127 21 0 chr20 57993756 57994039 -8673966 + AluSx SINE Alu 1 289 -23 24 32 0 0 chr20 57994149 57994180 -8673825 + AT_rich Low_complexity Low_complexity 1 31 0 2319 90 0 0 chr20 57994245 57994533 -8673472 - AluSc SINE Alu -21 288 1 27 62 0 0 chr20 57994822 57994870 -8673135 + AT_rich Low_complexity Low_complexity 1 48 0 3691 138 69 55 chr20 57995606 57996858 -8671147 + pTR5 LTR ERV1 743 2295 -143 365 351 50 21 chr20 57996870 57997112 -8670893 - LTR16A LTR ERVL -55 395 147 1759 233 18 2 chr20 57997432 57997827 -8670178 + LTR57 LTR ERVL 1 401 -10 22 0 0 0 chr20 57997841 57997863 -8670142 + AT_rich Low_complexity Low_complexity 1 22 0 416 340 34 29 chr20 57998502 57998740 -8669265 - MIR SINE MIR -22 240 2 257 342 30 25 chr20 57998972 57999171 -8668834 + L1 LINE L1 3964 4163 -1983 1497 136 99 6 chr20 57999175 57999484 -8668521 - L1 LINE L1 -1549 4597 4250 318 26 0 0 chr20 57999484 57999523 -8668482 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1497 136 99 6 chr20 57999523 57999565 -8668440 - L1 LINE L1 -1896 4250 4213 * 2123 211 18 8 chr20 57999556 58000044 -8667961 + L1 LINE L1 4585 5077 -1069 372 333 82 6 chr20 58000901 58001060 -8666945 - MIR SINE MIR -16 246 76 1812 144 43 35 chr20 58001062 58001431 -8666574 - THE1C LTR MaLR -3 372 1 8956 138 38 46 chr20 58001431 58003025 -8664980 - THE1C-int LTR MaLR 0 1580 1 1823 150 38 32 chr20 58003025 58003398 -8664607 - THE1C LTR MaLR 0 375 1 1607 197 16 30 chr20 58003421 58003786 -8664219 + MLT1A1 LTR MaLR 5 364 -1 23 33 0 0 chr20 58004297 58004327 -8663678 + AT_rich Low_complexity Low_complexity 1 30 0 183 235 0 0 chr20 58004569 58004620 -8663385 + (CACG)n Simple_repeat Simple_repeat 1 51 0 2088 148 3 0 chr20 58004663 58004974 -8663031 + AluSx SINE Alu 1 312 0 1396 233 22 17 chr20 58005436 58005797 -8662208 - MLT1A1 LTR MaLR 0 365 3 1390 204 103 37 chr20 58005856 58006292 -8661713 + MLT1C LTR MaLR 3 467 0 331 64 0 0 chr20 58006373 58006420 -8661585 + L1PA15 LINE L1 6110 6156 -9 2268 70 7 10 chr20 58006797 58007098 -8660907 - AluY SINE Alu -11 300 1 425 113 0 0 chr20 58007812 58007874 -8660131 + MSTA LTR MaLR 365 426 -2 180 349 78 23 chr20 58008163 58008292 -8659713 - MIR SINE MIR -102 160 25 4960 271 108 16 chr20 58008575 58010396 -8657609 + L1M2c LINE L1 7 1994 -4795 1874 216 63 37 chr20 58010406 58011116 -8656889 + L1M2c LINE L1 3149 3877 -2911 * 3259 218 25 11 chr20 58011105 58011946 -8656059 + L1M2c LINE L1 4095 4947 -1841 359 241 37 37 chr20 58012670 58012778 -8655227 + MIR SINE MIR 47 154 -108 635 299 24 100 chr20 58012865 58013236 -8654769 - L2 LINE L2 -5 3267 2925 2396 72 0 0 chr20 58013784 58014075 -8653930 + AluSq SINE Alu 1 291 -22 7799 194 61 10 chr20 58014833 58016824 -8651181 + L1 LINE L1 3245 5336 -810 433 224 143 5 chr20 58018602 58018798 -8649207 - LTR54 LTR ERV1 -1 509 287 1458 194 25 0 chr20 58018829 58019154 -8648851 - L1MA4 LINE L1 -6 6294 5962 380 71 0 18 chr20 58019233 58019289 -8648716 - L1MA4 LINE L1 -340 5963 5909 867 186 157 0 chr20 58019290 58019500 -8648505 - LTR54B LTR ERV1 -255 243 1 1967 127 34 0 chr20 58019646 58019937 -8648068 + AluSx SINE Alu 1 301 -11 21 57 0 0 chr20 58020126 58020161 -8647844 + AT_rich Low_complexity Low_complexity 1 35 0 609 307 96 55 chr20 58020612 58021071 -8646934 + L2 LINE L2 2127 2604 -710 194 368 32 11 chr20 58021115 58021210 -8646795 + L2 LINE L2 2600 2696 -618 207 210 70 20 chr20 58021680 58021780 -8646225 + (TTATA)n Simple_repeat Simple_repeat 5 109 0 576 220 23 8 chr20 58022336 58022468 -8645537 - LTR12 LTR ERV1 -222 492 359 248 222 14 0 chr20 58022468 58022540 -8645465 - LTR30 LTR ERV1 -98 624 552 1373 118 96 44 chr20 58022541 58022811 -8645194 - LTR12 LTR ERV1 -430 284 1 261 0 0 0 chr20 58024032 58024068 -8643937 + (TC)n Simple_repeat Simple_repeat 1 65 0 261 0 0 0 chr20 58024068 58024097 -8643908 + (TC)n Simple_repeat Simple_repeat 2 30 0 198 0 0 0 chr20 58024120 58024142 -8643863 + (TC)n Simple_repeat Simple_repeat 1 22 0 3017 158 23 3 chr20 58024728 58025645 -8642360 - THE1C-int LTR MaLR -585 995 1 2060 137 26 42 chr20 58025645 58026026 -8641979 - THE1C LTR MaLR 0 375 1 23 33 0 0 chr20 58026031 58026061 -8641944 + AT_rich Low_complexity Low_complexity 1 30 0 225 0 0 0 chr20 58026590 58026615 -8641390 + (CA)n Simple_repeat Simple_repeat 1 25 0 258 32 0 0 chr20 58026677 58026708 -8641297 + (TTG)n Simple_repeat Simple_repeat 2 32 0 1013 284 68 51 chr20 58027023 58027685 -8640320 + L1MEc LINE L1 861 1533 -4863 554 282 28 12 chr20 58027685 58028008 -8639997 + L1M4 LINE L1 3608 3935 -2211 * 2558 219 58 38 chr20 58027990 58028781 -8639224 + L1MC3 LINE L1 6541 7347 -438 533 244 0 0 chr20 58028795 58028922 -8639083 + L1ME3A LINE L1 6027 6153 -17 1229 255 81 24 chr20 58029305 58029677 -8638328 - MLT1E LTR MaLR 0 593 201 1858 83 11 19 chr20 58029796 58030062 -8637943 + AluSg1 SINE Alu 35 298 -11 2052 138 3 10 chr20 58030063 58030368 -8637637 + AluSx SINE Alu 1 303 -9 324 0 0 0 chr20 58030391 58030427 -8637578 + (TG)n Simple_repeat Simple_repeat 1 36 0 2192 109 30 0 chr20 58030446 58030749 -8637256 + AluSx SINE Alu 1 312 0 2085 133 0 7 chr20 58030825 58031147 -8636858 - AluSq SINE Alu 0 313 3 1885 117 79 3 chr20 58031154 58031444 -8636561 - AluSx SINE Alu 0 312 1 237 83 0 0 chr20 58031609 58031645 -8636360 + (GGA)n Simple_repeat Simple_repeat 1 36 0 197 306 141 0 chr20 58031816 58031901 -8636104 - MIR SINE MIR -92 116 20 680 311 25 21 chr20 58031965 58032206 -8635799 - MIR SINE MIR -19 243 2 555 234 137 6 chr20 58032243 58032348 -8635657 - MLT1D LTR MaLR 0 505 415 2191 84 4 0 chr20 58032348 58032623 -8635382 + AluSc SINE Alu 20 295 -14 555 234 137 6 chr20 58032623 58032692 -8635313 - MLT1D LTR MaLR -90 415 308 1148 45 0 0 chr20 58032692 58032824 -8635181 - AluY SINE Alu -179 132 1 1420 198 32 6 chr20 58032824 58033138 -8634867 - MLT1D LTR MaLR -183 322 1 1124 196 61 4 chr20 58033219 58033553 -8634452 - MER110 LTR ERV1 -26 465 70 2130 115 0 3 chr20 58033592 58033879 -8634126 - AluSc SINE Alu -23 286 1 204 250 225 12 chr20 58033887 58033967 -8634038 - MIR SINE MIR -12 250 154 352 281 41 25 chr20 58034005 58034126 -8633879 + MIR SINE MIR 28 150 -112 2004 131 3 38 chr20 58034203 58034371 -8633634 - AluSx SINE Alu -10 302 149 2301 107 0 0 chr20 58034371 58034671 -8633334 - AluSc SINE Alu -9 300 1 2004 131 3 38 chr20 58034671 58034815 -8633190 - AluSx SINE Alu -163 149 1 2182 123 0 3 chr20 58034847 58035149 -8632856 - AluSg SINE Alu -9 301 1 1722 148 32 11 chr20 58035429 58035712 -8632293 - AluJb SINE Alu -23 289 1 2133 86 61 0 chr20 58035747 58036027 -8631978 + AluSg SINE Alu 3 299 -11 260 246 8 66 chr20 58036572 58036694 -8631311 + L1MC/D LINE L1 5711 5825 -1983 811 179 36 67 chr20 58037144 58037367 -8630638 - MER20 DNA MER1_type -3 216 1 695 33 0 11 chr20 58037575 58037665 -8630340 - LTR7 LTR ERV1 0 450 362 363 85 0 34 chr20 58037667 58037726 -8630279 - LTR7 LTR ERV1 -393 57 1 1937 163 0 0 chr20 58037787 58038094 -8629911 - AluJb SINE Alu -5 307 1 21 36 0 0 chr20 58038305 58038333 -8629672 + AT_rich Low_complexity Low_complexity 1 28 0 811 103 0 3 chr20 58038340 58038584 -8629421 + AluSx SINE Alu 1 306 -6 21 36 0 0 chr20 58038584 58038612 -8629393 + AT_rich Low_complexity Low_complexity 1 28 0 1822 172 0 3 chr20 58038724 58039026 -8628979 + AluJo SINE Alu 1 301 -11 2371 110 0 0 chr20 58039473 58039783 -8628222 - AluSx SINE Alu -2 310 1 2138 124 7 0 chr20 58039789 58040072 -8627933 - AluSx SINE Alu -23 289 5 265 237 34 0 chr20 58040075 58040134 -8627871 - MER5A DNA MER1_type -68 121 61 248 206 43 65 chr20 58040185 58040277 -8627728 - MER5A DNA MER1_type -68 121 32 2248 94 14 14 chr20 58040805 58041102 -8626903 + AluSc SINE Alu 1 297 -12 1164 94 11 50 chr20 58041102 58041314 -8626691 + AluSg/x SINE Alu 134 312 0 1786 180 0 20 chr20 58041597 58041902 -8626103 - AluJo SINE Alu -13 299 1 1065 147 68 0 chr20 58041959 58042150 -8625855 - MER2 DNA MER2_type 0 345 142 580 157 7 50 chr20 58042137 58042174 -8625831 + MER6B DNA MER2_type 49 86 -779 * 2263 103 6 22 chr20 58042174 58042485 -8625520 - AluSx SINE Alu -6 306 1 580 157 7 50 chr20 58042485 58042587 -8625418 + MER6B DNA MER2_type 86 182 -28 812 173 0 8 chr20 58042592 58042725 -8625280 - MER2 DNA MER2_type -213 132 1 356 353 26 19 chr20 58042781 58042937 -8625068 - L1M4 LINE L1 -1233 4913 4757 365 221 23 118 chr20 58043397 58043593 -8624412 + L1MC4 LINE L1 1922 6989 -1333 361 269 0 32 chr20 58043526 58043619 -8624386 - L1MC4 LINE L1 -1339 6703 6614 * 919 163 7 0 chr20 58043620 58043761 -8624244 - AluJb SINE Alu -27 285 144 371 293 23 8 chr20 58043766 58043899 -8624106 + L2 LINE L2 3169 3303 -10 2329 113 0 0 chr20 58043957 58044258 -8623747 + AluSq SINE Alu 4 304 -9 2478 91 10 0 chr20 58044258 58044567 -8623438 + AluSx SINE Alu 1 312 0 2129 115 14 7 chr20 58044845 58045141 -8622864 + AluSg SINE Alu 7 304 -6 752 198 66 18 chr20 58045484 58045651 -8622354 + FAM SINE Alu 1 175 0 975 118 15 0 chr20 58045652 58045787 -8622218 + AluJo SINE Alu 1 137 -175 385 249 38 19 chr20 58046287 58046391 -8621614 - L1MC4 LINE L1 -1139 6703 6558 377 283 20 10 chr20 58046302 58046401 -8621604 + L1MC4 LINE L1 6610 6709 -1333 * 337 92 66 53 chr20 58046432 58046508 -8621497 + L1MA8 LINE L1 6205 6281 -10 2287 98 0 7 chr20 58046662 58046958 -8621047 + AluSx SINE Alu 1 294 -18 2363 109 3 0 chr20 58047639 58047950 -8620055 - AluSp SINE Alu -1 312 1 584 192 54 31 chr20 58047960 58048090 -8619915 - AluJo SINE Alu -178 134 2 2219 124 10 0 chr20 58048174 58048481 -8619524 - AluSx SINE Alu -2 310 1 1752 178 3 20 chr20 58048482 58048785 -8619220 - AluJo SINE Alu -14 298 1 1660 173 49 3 chr20 58049012 58049129 -8618876 + AluJo SINE Alu 1 111 -201 306 0 0 0 chr20 58049129 58049163 -8618842 + (CA)n Simple_repeat Simple_repeat 1 34 0 1660 173 49 3 chr20 58049163 58049329 -8618676 + AluJo SINE Alu 111 297 -15 822 176 6 31 chr20 58049349 58049508 -8618497 + AluSg/x SINE Alu 147 301 -11 314 257 20 20 chr20 58049646 58049747 -8618258 + MER5A DNA MER1_type 6 106 -83 187 330 0 50 chr20 58049947 58050047 -8617958 - L2 LINE L2 -84 3229 3135 2146 130 3 13 chr20 58050106 58050421 -8617584 + AluSx SINE Alu 1 312 0 1780 162 20 13 chr20 58051524 58051826 -8616179 + AluJb SINE Alu 1 304 -8 434 121 0 0 chr20 58051826 58051892 -8616113 + U3 snRNA snRNA 5 70 -147 1892 151 3 60 chr20 58051913 58052049 -8615956 + AluSx SINE Alu 1 143 -169 2464 109 0 0 chr20 58052049 58052361 -8615644 + AluSx SINE Alu 1 312 0 1892 151 3 60 chr20 58052361 58052555 -8615450 + AluSx SINE Alu 143 312 0 320 248 52 85 chr20 58052563 58052716 -8615289 + L1MC/D LINE L1 5290 5437 -922 328 252 108 22 chr20 58053488 58053627 -8614378 + L2 LINE L2 3161 3311 -2 1930 154 7 0 chr20 58054050 58054342 -8613663 - AluJo SINE Alu -12 300 7 368 279 8 41 chr20 58054644 58054711 -8613294 - MIR SINE MIR -48 214 151 2344 104 0 19 chr20 58054711 58055027 -8612978 - AluSx SINE Alu -2 310 1 368 279 8 41 chr20 58055027 58055081 -8612924 - MIR SINE MIR -111 151 97 357 264 37 68 chr20 58055145 58055308 -8612697 + MIR SINE MIR 34 191 -71 2145 133 0 0 chr20 58055987 58056310 -8611695 - AluSx SINE Alu 0 323 1 2303 87 47 0 chr20 58056383 58056681 -8611324 + AluSq SINE Alu 1 312 -1 2617 58 0 3 chr20 58056685 58056996 -8611009 + AluY SINE Alu 1 310 -1 1065 126 65 47 chr20 58057297 58057512 -8610493 - MER20 DNA MER1_type 0 219 1 240 234 169 0 chr20 58057753 58057830 -8610175 + L1M4 LINE L1 4747 4836 -1310 2332 110 0 0 chr20 58057908 58058207 -8609798 + AluSx SINE Alu 1 299 -13 463 271 8 0 chr20 58058525 58058643 -8609362 + MIR SINE MIR 93 211 -51 609 212 0 36 chr20 58058719 58058875 -8609130 + FLAM_C SINE Alu 1 133 0 462 92 0 13 chr20 58058916 58058992 -8609013 + AluSp/q SINE Alu 226 300 -13 2337 92 20 0 chr20 58059050 58059342 -8608663 + AluSp SINE Alu 1 298 -15 1218 182 0 5 chr20 58059356 58059559 -8608446 + AluJb SINE Alu 1 202 -110 769 163 15 7 chr20 58059559 58059694 -8608311 + AluJo/FRAM SINE Alu 161 296 -16 2237 107 0 17 chr20 58059706 58060006 -8607999 + AluSx SINE Alu 1 295 -17 2252 108 0 0 chr20 58060189 58060486 -8607519 - AluSg SINE Alu -8 302 6 190 287 81 0 chr20 58060659 58060746 -8607259 + L2 LINE L2 3161 3254 -18 2481 68 0 43 chr20 58061190 58061516 -8606489 - AluSq SINE Alu -1 312 1 438 253 13 53 chr20 58061523 58061673 -8606332 + L2 LINE L2 3170 3313 0 207 262 75 47 chr20 58061986 58062093 -8605912 - MIR SINE MIR 0 262 153 2410 80 3 3 chr20 58062093 58062394 -8605611 - AluSx SINE Alu -11 301 1 771 122 0 102 chr20 58062807 58062925 -8605080 + AluJo/FLAM SINE Alu 2 104 -198 2326 113 0 0 chr20 58062925 58063227 -8604778 - AluSc SINE Alu -7 302 1 771 122 0 102 chr20 58063227 58063255 -8604750 + AluJo/FLAM SINE Alu 104 133 -169 2104 129 3 0 chr20 58063261 58063576 -8604429 + AluSp SINE Alu 1 316 0 2353 113 0 0 chr20 58063790 58064091 -8603914 - AluSx SINE Alu -11 301 1 774 203 44 6 chr20 58064372 58064554 -8603451 - MER5A DNA MER1_type 0 189 1 1538 132 9 0 chr20 58064573 58064792 -8603213 - AluJb SINE Alu -5 307 87 2400 95 7 0 chr20 58064973 58065278 -8602727 - AluSc SINE Alu -2 307 1 1310 89 0 6 chr20 58065287 58065456 -8602549 - AluY SINE Alu -8 303 136 2303 97 3 10 chr20 58065498 58065808 -8602197 + AluSc SINE Alu 1 308 -1 2227 120 0 3 chr20 58066465 58066766 -8601239 + AluSx SINE Alu 1 300 -12 2534 69 0 3 chr20 58066785 58067091 -8600914 - AluY SINE Alu -6 305 1 1646 123 24 123 chr20 58067600 58067934 -8600071 - AluYb8 SINE Alu -17 301 1 2398 71 0 23 chr20 58067961 58068308 -8599697 + AluSp SINE Alu 2 313 0 219 88 0 0 chr20 58068680 58068714 -8599291 + (TTCC)n Simple_repeat Simple_repeat 1 34 0 33 43 0 0 chr20 58073350 58073397 -8594608 + GC_rich Low_complexity Low_complexity 1 47 0 26 0 0 0 chr20 58073566 58073592 -8594413 + GC_rich Low_complexity Low_complexity 1 26 0 1575 137 112 4 chr20 58077088 58077337 -8590668 + AluSx SINE Alu 1 276 -36 25 0 0 0 chr20 58077337 58077362 -8590643 + AT_rich Low_complexity Low_complexity 1 25 0 1582 139 100 19 chr20 58079896 58080206 -8587799 + MER2 DNA MER2_type 10 344 -1 1718 161 62 0 chr20 58080408 58080699 -8587306 + AluSx SINE Alu 1 309 -3 182 161 36 71 chr20 58081558 58081614 -8586391 + MIR SINE MIR 49 102 -160 249 275 11 33 chr20 58081648 58081739 -8586266 + MIR SINE MIR 172 260 -2 225 94 0 0 chr20 58082795 58082827 -8585178 + (T)n Simple_repeat Simple_repeat 1 32 0 186 43 0 0 chr20 58083442 58083465 -8584540 + (TTTTTG)n Simple_repeat Simple_repeat 3 25 0 2502 83 3 3 chr20 58083859 58084171 -8583834 - AluSx SINE Alu 0 312 1 2470 76 0 7 chr20 58084997 58085300 -8582705 - AluY SINE Alu -10 301 1 2436 76 0 7 chr20 58085484 58085788 -8582217 - AluY SINE Alu -9 302 1 2343 119 0 0 chr20 58086923 58087226 -8580779 - AluSq SINE Alu -10 303 1 252 0 0 0 chr20 58087710 58087738 -8580267 + (TG)n Simple_repeat Simple_repeat 2 29 0 1510 206 51 23 chr20 58087901 58088075 -8579930 + MLT1C LTR MaLR 1 169 -298 2067 127 7 0 chr20 58088075 58088351 -8579654 + AluSx SINE Alu 3 280 -32 2176 97 23 10 chr20 58088358 58088658 -8579347 + AluSp SINE Alu 2 305 -8 2556 66 0 3 chr20 58088658 58088960 -8579045 + AluY SINE Alu 1 302 -9 1510 206 51 23 chr20 58088960 58089169 -8578836 + MLT1C LTR MaLR 173 404 -63 1841 179 0 0 chr20 58089179 58089470 -8578535 - AluJb SINE Alu -21 291 1 355 256 17 36 chr20 58089558 58089686 -8578319 + MER5A DNA MER1_type 53 189 0 1166 148 32 37 chr20 58089841 58090057 -8577948 + AluJo SINE Alu 77 291 -21 2470 59 3 31 chr20 58090064 58090384 -8577621 + AluY SINE Alu 1 311 0 275 302 21 10 chr20 58090395 58090491 -8577514 + L2 LINE L2 3136 3232 -40 265 239 0 0 chr20 58090616 58090690 -8577315 - AluJ/FLAM SINE Alu -245 57 1 227 344 0 21 chr20 58090693 58090786 -8577219 - L3 LINE CR1 -331 1246 1156 363 242 217 17 chr20 58090847 58091148 -8576857 - L2 LINE L2 -287 3026 2664 536 314 118 17 chr20 58091263 58091407 -8576598 - L2 LINE L2 -1 3312 3184 2317 93 0 7 chr20 58091407 58091707 -8576298 - AluSx SINE Alu -14 298 1 536 314 118 17 chr20 58091707 58091849 -8576156 - L2 LINE L2 -129 3184 2997 1714 170 11 7 chr20 58092129 58092411 -8575594 - AluJb SINE Alu -24 288 6 1881 138 3 50 chr20 58092840 58093159 -8574846 + AluJo SINE Alu 1 304 -8 350 225 93 70 chr20 58093289 58093373 -8574632 - L1MC4a LINE L1 -1831 5977 5888 1749 126 56 25 chr20 58093373 58093658 -8574347 - AluJb SINE Alu -18 294 1 350 225 93 70 chr20 58093658 58093702 -8574303 - L1MC4a LINE L1 -1920 5888 5846 1989 125 7 3 chr20 58093725 58094013 -8573992 + AluSq SINE Alu 1 289 -24 196 237 0 0 chr20 58094043 58094081 -8573924 - L2 LINE L2 -19 3253 3216 1914 139 4 0 chr20 58094389 58094656 -8573349 + AluSx SINE Alu 1 268 -44 1067 165 10 16 chr20 58094706 58094900 -8573105 + AluJo SINE Alu 120 312 0 1379 142 160 36 chr20 58094902 58094987 -8573018 + AluSx SINE Alu 1 74 -238 228 35 0 0 chr20 58094987 58095016 -8572989 + (GGCTG)n Simple_repeat Simple_repeat 5 33 0 2350 104 0 0 chr20 58095019 58095317 -8572688 + AluSg SINE Alu 11 308 -2 1379 142 160 36 chr20 58095317 58095502 -8572503 + AluSx SINE Alu 75 309 -3 198 71 0 0 chr20 58095506 58095534 -8572471 + (A)n Simple_repeat Simple_repeat 1 28 0 1507 213 13 10 chr20 58095548 58095849 -8572156 - AluJo SINE Alu -10 302 1 1201 232 12 102 chr20 58095862 58096317 -8571688 - L1ME1 LINE L1 -86 6080 5586 2508 73 0 16 chr20 58096317 58096633 -8571372 - AluY SINE Alu 0 311 1 2298 97 31 0 chr20 58096633 58096923 -8571082 - AluSx SINE Alu -13 299 1 2148 124 14 0 chr20 58096924 58097214 -8570791 - AluSx SINE Alu -18 294 1 2026 137 7 16 chr20 58097214 58097520 -8570485 - AluJb SINE Alu -8 304 2 1201 232 12 102 chr20 58097520 58097560 -8570445 - L1ME1 LINE L1 -498 5668 5626 211 293 47 47 chr20 58097810 58097916 -8570089 + MIR SINE MIR 30 135 -127 2118 105 0 71 chr20 58097974 58098298 -8569707 - AluSx SINE Alu -11 301 1 242 320 146 28 chr20 58098643 58099133 -8568872 + L2 LINE L2 2461 3050 -263 900 220 62 46 chr20 58099298 58099353 -8568652 - MER58B DNA MER1_type -2079 341 288 1573 181 35 35 chr20 58099353 58099640 -8568365 + AluJb SINE Alu 1 287 -25 900 220 62 46 chr20 58099640 58099651 -8568354 - MER58B DNA MER1_type -2132 288 279 2131 121 14 0 chr20 58099651 58099941 -8568064 + AluSx SINE Alu 1 294 -18 900 220 62 46 chr20 58099941 58100129 -8567876 - MER58B DNA MER1_type -2141 279 78 1629 191 7 7 chr20 58100129 58100422 -8567583 + AluJo SINE Alu 17 309 -3 900 220 62 46 chr20 58100422 58100469 -8567536 - MER58B DNA MER1_type -2342 78 33 380 297 54 0 chr20 58100881 58101029 -8566976 + MIR SINE MIR 37 192 -70 285 337 21 42 chr20 58101659 58101852 -8566153 - L2 LINE L2 -175 3138 2950 343 316 160 5 chr20 58101955 58102161 -8565844 - L2 LINE L2 -573 2741 2504 571 219 129 5 chr20 58102570 58102762 -8565243 + MER20 DNA MER1_type 5 219 0 1274 115 0 0 chr20 58102790 58102955 -8565050 - AluSg/x SINE Alu -14 298 134 2350 109 0 7 chr20 58102955 58103259 -8564746 - AluSx SINE Alu -8 304 3 2232 141 0 0 chr20 58103262 58103574 -8564431 - AluSx SINE Alu 0 312 1 2401 91 10 0 chr20 58103772 58104069 -8563936 - AluSx SINE Alu -12 300 1 2082 125 24 3 chr20 58104687 58104984 -8563021 - AluSx SINE Alu -9 303 1 2197 93 3 30 chr20 58105018 58105320 -8562685 + AluY SINE Alu 1 294 -17 843 148 0 22 chr20 58105494 58105629 -8562376 - FLAM_C SINE Alu -9 134 3 399 261 128 33 chr20 58105784 58105964 -8562041 - MIR SINE MIR -58 204 8 196 260 20 0 chr20 58106018 58106068 -8561937 - MIR SINE MIR -3 259 209 2289 96 3 3 chr20 58106069 58106362 -8561643 - AluSg1 SINE Alu -16 293 1 35 54 0 0 chr20 58106371 58106427 -8561578 + AT_rich Low_complexity Low_complexity 1 56 0 258 86 0 0 chr20 58106448 58106510 -8561495 + Alu SINE Alu 251 312 0 2130 113 0 3 chr20 58106876 58107179 -8560826 + AluSx SINE Alu 1 302 0 1977 141 0 7 chr20 58107182 58107509 -8560496 + AluSx SINE Alu 1 325 0 1812 149 20 43 chr20 58107672 58107974 -8560031 - AluJo SINE Alu -15 297 3 550 272 65 96 chr20 58108154 58108268 -8559737 - L2 LINE L2 -507 2807 2691 2281 114 0 0 chr20 58108268 58108567 -8559438 - AluSx SINE Alu -13 299 1 550 272 65 96 chr20 58108567 58108838 -8559167 - L2 LINE L2 -623 2691 2434 2383 106 0 3 chr20 58109347 58109650 -8558355 - AluSx SINE Alu -10 302 1 260 266 9 88 chr20 58109659 58109718 -8558287 - MIR SINE MIR -14 248 201 2221 129 0 0 chr20 58109718 58110013 -8557992 - AluSx SINE Alu -17 295 1 260 266 9 88 chr20 58110013 58110066 -8557939 - MIR SINE MIR -61 201 145 2324 114 0 0 chr20 58110248 58110546 -8557459 + AluSc SINE Alu 2 299 -10 2053 137 23 7 chr20 58110747 58111054 -8556951 - AluJb SINE Alu 0 312 1 2161 128 0 10 chr20 58111058 58111364 -8556641 - AluSx SINE Alu -9 303 1 604 135 48 19 chr20 58111576 58111680 -8556325 + U6 snRNA snRNA 1 107 0 29 0 0 0 chr20 58111680 58111709 -8556296 + AT_rich Low_complexity Low_complexity 1 29 0 389 255 106 43 chr20 58111713 58111901 -8556104 - L2 LINE L2 -23 3290 3091 189 0 0 0 chr20 58111925 58111946 -8556059 + (GGGGA)n Simple_repeat Simple_repeat 3 23 0 553 288 189 9 chr20 58111956 58112289 -8555716 - L2 LINE L2 -337 2977 2585 1368 237 94 18 chr20 58112289 58112723 -8555282 + MLT1C LTR MaLR 1 467 0 585 271 100 48 chr20 58112723 58112911 -8555094 - L2 LINE L2 -725 2589 2381 1900 145 51 0 chr20 58112911 58113207 -8554798 + AluJb SINE Alu 1 311 -1 585 271 100 48 chr20 58113207 58113287 -8554718 - L2 LINE L2 -933 2381 2307 240 297 54 0 chr20 58113300 58113411 -8554594 - L1MC/D LINE L1 -1916 5892 5776 2421 105 0 6 chr20 58113417 58113732 -8554273 - AluSq SINE Alu 0 313 1 1938 153 0 13 chr20 58113833 58114134 -8553871 - AluJo SINE Alu -15 297 1 2149 142 3 0 chr20 58114265 58114576 -8553429 + AluSx SINE Alu 1 312 0 1380 146 3 140 chr20 58114587 58114937 -8553068 + AluJb SINE Alu 1 302 0 258 333 78 0 chr20 58115133 58115235 -8552770 - MER103 DNA DNA -46 120 11 2116 84 40 40 chr20 58115755 58116052 -8551953 - AluSg SINE Alu -13 297 1 314 279 16 8 chr20 58116053 58116182 -8551823 + L1MB7 LINE L1 6040 6169 -15 1020 128 41 58 chr20 58116182 58116354 -8551651 - AluSg/x SINE Alu -10 302 134 1940 139 7 26 chr20 58116354 58116657 -8551348 - AluSx SINE Alu -15 297 1 828 138 0 0 chr20 58116699 58116815 -8551190 + AluJb SINE Alu 1 116 -196 2267 95 7 0 chr20 58116815 58117109 -8550896 - AluSq SINE Alu -17 296 1 246 296 111 0 chr20 58117282 58117390 -8550615 - L2 LINE L2 -5 3308 3189 451 288 42 26 chr20 58117853 58118163 -8549842 - L2 LINE L2 -227 3045 2733 424 223 71 9 chr20 58118401 58118513 -8549492 - MER5C DNA MER1_type 0 324 206 811 200 7 0 chr20 58118519 58118664 -8549341 + FRAM SINE Alu 1 146 -30 2207 121 0 16 chr20 58118690 58119004 -8549001 - AluSx SINE Alu -3 309 1 498 242 0 0 chr20 58119017 58119127 -8548878 + A-rich Low_complexity Low_complexity 1 113 -19 405 161 196 9 chr20 58119127 58119239 -8548766 + FLAM_C SINE Alu 1 133 0 498 242 0 0 chr20 58119239 58119260 -8548745 + A-rich Low_complexity Low_complexity 112 132 0 385 240 24 40 chr20 58119298 58119423 -8548582 + L1MC4 LINE L1 7115 7237 -805 336 252 81 8 chr20 58119442 58119565 -8548440 + MLT1C LTR MaLR 27 158 -347 1757 178 0 10 chr20 58119602 58119905 -8548100 - AluJb SINE Alu -1 311 12 1479 179 40 50 chr20 58119925 58120226 -8547779 - AluJo SINE Alu -14 298 1 742 233 34 10 chr20 58120295 58120509 -8547496 + MLT1C LTR MaLR 263 460 -7 794 173 0 0 chr20 58120520 58120653 -8547352 + FLAM_C SINE Alu 1 133 0 454 238 144 11 chr20 58120688 58120869 -8547136 + L1MC4 LINE L1 7232 7436 -606 1288 157 0 14 chr20 58121425 58121635 -8546370 - AluJo SINE Alu -24 288 82 2265 110 0 0 chr20 58121864 58122154 -8545851 + AluSx SINE Alu 2 291 -21 661 192 11 71 chr20 58122176 58122316 -8545689 - MER5B DNA MER1_type -3 175 47 2491 42 42 0 chr20 58122316 58122604 -8545401 + AluY SINE Alu 1 300 -11 661 192 11 71 chr20 58122604 58122645 -8545360 - MER5B DNA MER1_type -131 47 5 2452 97 0 0 chr20 58122937 58123246 -8544759 - AluSx SINE Alu -3 309 1 2613 51 0 0 chr20 58123608 58123902 -8544103 - AluY SINE Alu -17 294 1 1941 110 35 26 chr20 58124589 58124899 -8543106 - AluSq SINE Alu 0 313 1 537 283 119 60 chr20 58125102 58125518 -8542487 - L1MC4a LINE L1 -1872 5936 5473 2434 85 3 0 chr20 58125518 58125812 -8542193 - AluSp SINE Alu -18 295 1 537 283 119 60 chr20 58125812 58125982 -8542023 - L1MC4a LINE L1 -2335 5473 5315 2353 112 3 3 chr20 58125983 58126295 -8541710 - AluSx SINE Alu 0 312 1 1327 169 80 0 chr20 58126296 58126533 -8541472 - AluJb SINE Alu 0 312 57 2096 121 48 0 chr20 58126779 58127068 -8540937 - AluSx SINE Alu -9 303 1 356 310 120 27 chr20 58127202 58127460 -8540545 - L2 LINE L2 -468 2846 2565 2318 122 0 0 chr20 58128180 58128492 -8539513 - AluSx SINE Alu 0 312 1 436 322 75 28 chr20 58128500 58128755 -8539250 + HAL1 LINE L1 359 625 -1882 251 232 126 32 chr20 58128785 58128880 -8539125 + MER53 DNA DNA 1 104 -85 279 328 51 46 chr20 58128907 58129102 -8538903 + HAL1 LINE L1 658 853 -1654 1560 172 15 37 chr20 58129190 58129463 -8538542 + AluJo SINE Alu 11 277 -35 2502 64 0 0 chr20 58129464 58129760 -8538245 - AluY SINE Alu -15 296 1 493 240 8 0 chr20 58130681 58130810 -8537195 + MER94 DNA DNA 1 130 -4 2503 56 0 31 chr20 58130927 58131248 -8536757 - AluY SINE Alu 0 311 1 306 0 0 0 chr20 58131305 58131339 -8536666 + (T)n Simple_repeat Simple_repeat 1 34 0 761 240 77 5 chr20 58131387 58131583 -8536422 + MER58A DNA MER1_type 4 213 -11 744 159 24 8 chr20 58131588 58131714 -8536291 + FLAM_C SINE Alu 3 130 -13 247 297 45 63 chr20 58131761 58131842 -8536163 - MER5B DNA MER1_type -34 144 64 2092 103 22 0 chr20 58131842 58132115 -8535890 - AluSx SINE Alu -33 279 1 247 297 45 63 chr20 58132115 58132144 -8535861 - MER5B DNA MER1_type -114 64 36 830 193 56 0 chr20 58132150 58132311 -8535694 + FAM SINE Alu 1 170 -5 1969 129 35 28 chr20 58132547 58132865 -8535140 + 7SLRNA srpRNA srpRNA 1 320 0 257 315 54 18 chr20 58132920 58133031 -8534974 - MIR SINE MIR -66 196 82 363 329 79 35 chr20 58133177 58133493 -8534512 - L2 LINE L2 -15 3257 2928 375 286 88 26 chr20 58133887 58134281 -8533724 - LTR16A LTR ERVL 0 457 1 201 233 0 0 chr20 58134283 58134326 -8533679 + MIR SINE MIR 79 121 -141 301 297 177 11 chr20 58134328 58134503 -8533502 + MIR SINE MIR 53 256 -6 193 212 67 129 chr20 58134571 58134714 -8533291 + MIR SINE MIR 21 154 -68 240 111 0 0 chr20 58135813 58135849 -8532156 + (GA)n Simple_repeat Simple_repeat 1 36 0 2167 185 135 2 chr20 58135886 58136345 -8531660 + MLT2B1 LTR ERVL 1 520 0 325 238 50 20 chr20 58136345 58136438 -8531567 - MER104 DNA Tc2 -60 120 25 1167 126 91 39 chr20 58136438 58136491 -8531514 - Tigger3(Golem) DNA MER2_type 0 3028 2979 1857 146 55 0 chr20 58136491 58136766 -8531239 - AluSx SINE Alu -22 290 1 1167 126 91 39 chr20 58136766 58136942 -8531063 - Tigger3(Golem) DNA MER2_type -49 2979 2787 2277 119 0 0 chr20 58136944 58137238 -8530767 + AluSx SINE Alu 1 294 -18 1101 163 49 0 chr20 58137238 58137422 -8530583 - Tigger3(Golem) DNA MER2_type -2836 193 1 501 225 87 7 chr20 58137553 58137691 -8530314 + MLT1K LTR MaLR 411 559 -29 1950 134 13 33 chr20 58137752 58138079 -8529926 - AluY SINE Alu 0 311 2 908 290 109 38 chr20 58138099 58138603 -8529402 - MLT1K LTR MaLR -19 569 30 2279 122 3 0 chr20 58139233 58139544 -8528461 - AluSq SINE Alu -1 312 1 1566 184 55 26 chr20 58139552 58139786 -8528219 - MLT2D LTR ERVL -56 358 109 2529 78 0 0 chr20 58139786 58140095 -8527910 - AluY SINE Alu 0 311 3 1566 184 55 26 chr20 58140095 58140208 -8527797 - MLT2D LTR ERVL -305 109 1 1627 254 74 2 chr20 58140217 58140690 -8527315 - L1ME3 LINE L1 -239 5923 5417 2294 118 0 3 chr20 58140748 58141053 -8526952 - AluSx SINE Alu -8 304 1 232 330 11 0 chr20 58141129 58141217 -8526788 - MIR SINE MIR -6 256 168 2348 108 0 9 chr20 58141223 58141538 -8526467 - AluSq SINE Alu -1 312 1 585 146 191 0 chr20 58141540 58141650 -8526355 - AluJo/FLAM SINE Alu -171 131 1 325 327 39 0 chr20 58142249 58142353 -8525652 + MIR SINE MIR 20 127 -135 189 309 73 0 chr20 58142384 58142439 -8525566 + L2 LINE L2 3251 3309 -4 831 272 57 37 chr20 58142452 58142750 -8525255 + MER46C DNA MER2_type 1 304 -34 575 288 99 80 chr20 58142749 58143172 -8524833 - MLT1K LTR MaLR -21 567 137 * 365 309 126 31 chr20 58143511 58143828 -8524177 + L2 LINE L2 2945 3291 -22 1840 157 35 3 chr20 58143829 58144115 -8523890 - AluJb SINE Alu -17 295 1 195 100 0 0 chr20 58144130 58144160 -8523845 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 2360 83 3 22 chr20 58144326 58144640 -8523365 - AluSp SINE Alu -5 308 1 2036 133 20 0 chr20 58144649 58144942 -8523063 - AluSx SINE Alu -13 299 1 344 313 0 14 chr20 58145066 58145149 -8522856 + CT-rich Low_complexity Low_complexity 2 84 -59 2414 97 0 3 chr20 58145149 58145161 -8522844 - AluY SINE Alu -2 309 298 243 0 0 0 chr20 58145161 58145188 -8522817 + (TTAAA)n Simple_repeat Simple_repeat 1 27 0 2414 97 0 3 chr20 58145188 58145485 -8522520 - AluY SINE Alu -13 298 1 344 313 0 14 chr20 58145485 58145545 -8522460 + CT-rich Low_complexity Low_complexity 84 143 0 265 150 0 0 chr20 58146028 58146068 -8521937 - Alu SINE Alu -268 40 1 2033 141 3 10 chr20 58146074 58146380 -8521625 - AluSx SINE Alu -8 304 1 867 134 146 0 chr20 58146384 58146555 -8521450 - MSTA LTR MaLR -232 196 1 246 316 79 9 chr20 58146794 58146908 -8521097 - MIR SINE MIR -109 153 32 947 219 56 14 chr20 58147927 58148113 -8519892 + MER58A DNA MER1_type 1 199 -2221 2286 97 3 3 chr20 58148113 58148411 -8519594 - AluY SINE Alu -13 298 1 947 219 56 14 chr20 58148411 58148439 -8519566 + MER58A DNA MER1_type 199 224 0 639 303 64 67 chr20 58148507 58148897 -8519108 - L2 LINE L2 0 3272 2884 2293 105 7 0 chr20 58149033 58149337 -8518668 - AluSq SINE Alu -7 306 1 735 216 52 26 chr20 58149384 58149578 -8518427 - MER3 DNA MER1_type -6 203 5 2464 62 3 40 chr20 58149639 58149961 -8518044 - AluSp SINE Alu -3 310 1 350 221 47 12 chr20 58150005 58150091 -8517914 + MIR SINE MIR 50 138 -124 318 260 229 65 chr20 58150490 58150844 -8517161 - MLT1K LTR MaLR -9 579 168 245 200 93 27 chr20 58151008 58151083 -8516922 - L2 LINE L2 -54 3259 3180 1255 230 114 8 chr20 58151875 58152253 -8515752 - MLT1C LTR MaLR -49 418 1 252 238 0 111 chr20 58152351 58152532 -8515473 + G-rich Low_complexity Low_complexity 2 162 0 1553 171 53 0 chr20 58152661 58152774 -8515231 + AluJo SINE Alu 1 107 -205 189 0 0 0 chr20 58152774 58152795 -8515210 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 1553 171 53 0 chr20 58152795 58152962 -8515043 + AluJo SINE Alu 107 296 -16 820 236 78 11 chr20 58153565 58154000 -8514005 - MLT1D LTR MaLR -8 479 1 327 167 97 0 chr20 58154002 58154074 -8513931 + MIR SINE MIR 65 143 -119 1631 177 56 7 chr20 58154086 58154374 -8513631 - AluJb SINE Alu -10 302 1 636 267 159 13 chr20 58154384 58154616 -8513389 + MLT1J LTR MaLR 48 313 -198 876 219 6 9 chr20 58154747 58155289 -8512716 + CT-rich Low_complexity Low_complexity 1 539 0 284 300 50 0 chr20 58155594 58155694 -8512311 - MIR SINE MIR -107 155 51 1866 149 6 44 chr20 58156119 58156435 -8511570 - AluJb SINE Alu -8 304 1 2278 106 10 0 chr20 58156697 58156990 -8511015 + AluSx SINE Alu 1 296 -16 2025 129 37 17 chr20 58157002 58157297 -8510708 + AluSx SINE Alu 1 301 -11 2367 63 0 7 chr20 58157301 58157614 -8510391 + AluY SINE Alu 1 311 0 1098 244 25 7 chr20 58157614 58157889 -8510116 - L1MD2 LINE L1 -17 6342 6063 1044 187 50 117 chr20 58157889 58158248 -8509757 - MLT1A1 LTR MaLR 0 365 31 429 241 134 109 chr20 58158276 58158403 -8509602 - L1MD2 LINE L1 -292 6067 5945 2181 137 3 0 chr20 58158403 58158710 -8509295 + AluSx SINE Alu 1 308 -4 429 241 134 109 chr20 58158710 58159132 -8508873 - L1MD2 LINE L1 -414 5945 5502 598 276 202 20 chr20 58159605 58159946 -8508059 + L2 LINE L2 2911 3313 0 382 331 156 17 chr20 58160023 58160383 -8507622 + HAL1 LINE L1 880 1289 -1218 376 135 27 0 chr20 58160384 58160458 -8507547 + GA-rich Low_complexity Low_complexity 4 79 0 2333 125 0 3 chr20 58162038 58162351 -8505654 - AluSq SINE Alu -1 312 1 1064 97 0 0 chr20 58162837 58162971 -8505034 + AluJb SINE Alu 1 134 -178 539 88 0 0 chr20 58163033 58163113 -8504892 + MADE1 DNA Mariner 1 80 0 773 239 16 11 chr20 58163113 58163297 -8504708 + MIR SINE MIR 78 262 0 256 384 15 0 chr20 58163410 58163543 -8504462 - MIR SINE MIR -108 154 20 191 196 157 0 chr20 58163620 58163671 -8504334 - L2 LINE L2 -17 3255 3197 2279 102 0 13 chr20 58163723 58164070 -8503935 - AluY SINE Alu 0 343 1 438 204 65 9 chr20 58164070 58164178 -8503827 - MER45 DNA AcHobo -1467 114 1 2435 92 0 3 chr20 58164261 58164566 -8503439 - AluSx SINE Alu -8 304 1 233 294 75 103 chr20 58164748 58164826 -8503179 - L2 LINE L2 -8 3264 3185 2726 74 69 7 chr20 58164826 58165244 -8502761 + MLT2A1 LTR ERVL 1 444 0 233 294 75 103 chr20 58165244 58165525 -8502480 - L2 LINE L2 -87 3185 2915 2309 113 0 0 chr20 58165626 58165928 -8502077 + AluSx SINE Alu 1 302 -10 608 233 204 0 chr20 58167291 58167467 -8500538 - MER20 DNA MER1_type -3 216 5 1167 148 278 0 chr20 58167866 58168096 -8499909 - AluSx SINE Alu -6 296 3 2296 125 0 0 chr20 58169051 58169362 -8498643 - AluY SINE Alu 0 311 1 678 270 87 9 chr20 58169363 58169470 -8498535 - MLT1K LTR MaLR -46 542 445 1748 208 7 0 chr20 58169470 58169778 -8498227 - AluJb SINE Alu -2 310 1 678 270 87 9 chr20 58169778 58169900 -8498105 - MLT1K LTR MaLR -143 445 295 249 228 18 0 chr20 58170046 58170103 -8497902 - MLT1K LTR MaLR -4 584 527 1494 158 0 21 chr20 58170391 58170631 -8497374 - AluSx SINE Alu -75 237 3 1568 89 0 0 chr20 58170769 58170985 -8497020 + AluSg/x SINE Alu 90 305 0 22 0 0 0 chr20 58171016 58171038 -8496967 + AT_rich Low_complexity Low_complexity 1 22 0 2401 159 88 25 chr20 58171086 58171409 -8496596 - L1MC3 LINE L1 -2 7783 7409 1737 126 0 34 chr20 58171409 58171672 -8496333 + AluSq SINE Alu 40 293 -20 2401 159 88 25 chr20 58171672 58171907 -8496098 - L1MC3 LINE L1 -376 7409 7190 1139 120 64 112 chr20 58172046 58172104 -8495901 + AluSg/x SINE Alu 76 135 -175 2578 62 3 0 chr20 58172104 58172413 -8495592 + AluY SINE Alu 1 310 -1 1139 120 64 112 chr20 58172413 58172587 -8495418 + AluSg/x SINE Alu 135 297 -13 2177 135 0 0 chr20 58172935 58173231 -8494774 - AluSg SINE Alu -14 296 1 1829 71 0 0 chr20 58173531 58173755 -8494250 + AluY SINE Alu 1 224 -87 242 226 0 19 chr20 58174320 58174373 -8493632 - MLT1K LTR MaLR -332 256 205 426 313 97 10 chr20 58175040 58175235 -8492770 + Charlie8 DNA MER1_type 2 213 -2204 187 276 48 29 chr20 58176290 58176395 -8491610 + MIR SINE MIR 73 179 -83 349 217 14 14 chr20 58176442 58176511 -8491494 + L1MC4 LINE L1 6641 6709 -1333 602 147 0 0 chr20 58176523 58176618 -8491387 - FRAM SINE Alu -26 150 56 452 294 8 0 chr20 58176627 58176753 -8491252 - MIR SINE MIR -27 235 109 1746 112 131 12 chr20 58176753 58177012 -8490993 - AluSq SINE Alu -18 295 6 2481 99 0 3 chr20 58177031 58177344 -8490661 - AluSq SINE Alu 0 313 2 180 0 0 0 chr20 58177344 58177364 -8490641 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 42 36 0 0 chr20 58177371 58177427 -8490578 + AT_rich Low_complexity Low_complexity 1 56 0 883 159 0 0 chr20 58177427 58177553 -8490452 - FLAM_C SINE Alu -17 126 1 23 0 0 0 chr20 58177564 58177587 -8490418 + AT_rich Low_complexity Low_complexity 1 23 0 231 314 157 7 chr20 58177653 58177806 -8490199 + MIR SINE MIR 86 261 -1 504 288 49 22 chr20 58177817 58178043 -8489962 - L1MC4a LINE L1 -1854 5954 5723 2456 84 0 28 chr20 58178557 58178877 -8489128 - AluSx SINE Alu -1 311 1 276 270 50 40 chr20 58179069 58179169 -8488836 + MIR SINE MIR 106 206 -56 216 261 85 73 chr20 58179400 58179565 -8488440 + L2 LINE L2 2895 3061 -252 196 248 202 16 chr20 58179730 58179859 -8488146 + MER5A DNA MER1_type 14 166 -23 * 347 271 10 0 chr20 58179789 58179885 -8488120 - MER5A DNA MER1_type -84 105 9 234 0 0 0 chr20 58180007 58180033 -8487972 + (CCCCCA)n Simple_repeat Simple_repeat 5 30 0 2248 114 0 0 chr20 58180070 58180367 -8487638 - AluSx SINE Alu -15 297 1 399 188 47 114 chr20 58180878 58180939 -8487066 + MIR SINE MIR 104 168 -94 2385 93 7 0 chr20 58180939 58181249 -8486756 + AluSx SINE Alu 1 312 0 399 188 47 114 chr20 58181249 58181336 -8486669 + MIR SINE MIR 168 242 -20 1308 234 34 57 chr20 58181741 58181906 -8486099 + MER20B DNA MER1_type 29 196 -587 2183 119 3 0 chr20 58181906 58182200 -8485805 - AluSx SINE Alu -17 295 1 1308 234 34 57 chr20 58182200 58182452 -8485553 + MER20B DNA MER1_type 196 436 -347 408 291 18 48 chr20 58182586 58182726 -8485279 + MIR SINE MIR 23 159 -103 2144 104 7 20 chr20 58182726 58183023 -8484982 + AluSx SINE Alu 1 293 -19 408 291 18 48 chr20 58183023 58183047 -8484958 + MIR SINE MIR 159 182 -80 217 304 0 13 chr20 58183283 58183362 -8484643 + C-rich Low_complexity Low_complexity 4 81 0 316 290 11 0 chr20 58183536 58183629 -8484376 - MIR SINE MIR -65 197 104 312 229 83 10 chr20 58184252 58184348 -8483657 - L2 LINE L2 -2 3311 3209 1543 193 84 0 chr20 58184348 58184680 -8483325 - MLT1A1 LTR MaLR 0 365 6 1942 195 61 2 chr20 58184893 58185303 -8482702 - MLT1D LTR MaLR 0 505 72 293 229 16 0 chr20 58185490 58185551 -8482454 - MLT1D LTR MaLR -442 63 2 312 308 105 0 chr20 58185584 58185717 -8482288 + MIR SINE MIR 83 229 -33 1211 162 0 6 chr20 58185777 58185956 -8482049 - AluJb SINE Alu -50 262 85 378 146 0 0 chr20 58186012 58186094 -8481911 + (TG)n Simple_repeat Simple_repeat 1 82 0 354 285 167 7 chr20 58187078 58187222 -8480783 + MIR SINE MIR 28 194 -68 553 201 136 45 chr20 58187306 58187352 -8480653 - MER20 DNA MER1_type -2 217 177 1781 170 0 14 chr20 58187352 58187640 -8480365 - AluJb SINE Alu -28 284 1 553 201 136 45 chr20 58187640 58187792 -8480213 - MER20 DNA MER1_type -42 177 1 386 286 101 67 chr20 58187838 58188076 -8479929 - HAL1b LINE L1 -35 1313 1068 356 296 31 44 chr20 58188185 58188344 -8479661 - MIR SINE MIR 0 262 106 403 302 0 39 chr20 58188457 58188586 -8479419 - MLT1J LTR MaLR -159 352 229 1056 109 17 0 chr20 58188703 58188730 -8479275 + (TTTC)n Simple_repeat Simple_repeat 1 205 0 1056 109 17 0 chr20 58188730 58188905 -8479100 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 2035 122 29 26 chr20 58188921 58189412 -8478593 - AluSx SINE Alu 0 492 1 366 267 103 0 chr20 58189451 58189567 -8478438 + MER45A DNA AcHobo 24 151 -27 437 237 14 36 chr20 58189959 58190098 -8477907 + L1MC4 LINE L1 7511 7646 -396 2315 114 0 0 chr20 58190299 58190598 -8477407 - AluSx SINE Alu -13 299 1 2536 61 0 10 chr20 58191269 58191581 -8476424 - AluY SINE Alu 0 311 3 1156 29 0 22 chr20 58191582 58191720 -8476285 - AluY SINE Alu -176 135 1 753 266 58 96 chr20 58191723 58192088 -8475917 - MLT1J LTR MaLR -159 352 2 397 229 130 16 chr20 58192127 58192226 -8475779 + MER58C DNA MER1_type 2 88 -2332 2163 111 16 7 chr20 58192226 58192532 -8475473 - AluSq SINE Alu -4 309 1 397 229 130 16 chr20 58192532 58192624 -8475381 + MER58C DNA MER1_type 88 215 0 255 306 122 61 chr20 58192653 58193051 -8474954 - L2 LINE L2 -4 3309 2873 270 0 0 0 chr20 58193051 58193081 -8474924 + (TTG)n Simple_repeat Simple_repeat 3 32 0 255 306 122 61 chr20 58193081 58193106 -8474899 - L2 LINE L2 -440 2873 2851 551 222 33 20 chr20 58193869 58194022 -8473983 - MLT1K LTR MaLR -30 558 404 180 158 0 0 chr20 58194025 58194063 -8473942 + CT-rich Low_complexity Low_complexity 2 39 0 216 347 0 28 chr20 58194511 58194583 -8473422 + MIR SINE MIR 29 98 -164 222 37 0 0 chr20 58194906 58194933 -8473072 + (GGGGA)n Simple_repeat Simple_repeat 3 29 0 556 212 246 5 chr20 58195411 58195614 -8472391 - MIR SINE MIR -3 259 8 528 322 60 0 chr20 58196002 58196201 -8471804 - L2 LINE L2 -178 3135 2925 522 291 80 59 chr20 58196970 58197207 -8470798 + MIR SINE MIR 2 243 -19 711 273 101 17 chr20 58197256 58197494 -8470511 + MIR SINE MIR 5 262 0 387 269 85 28 chr20 58197482 58197623 -8470382 + L2 LINE L2 3149 3297 -16 * 2190 125 0 0 chr20 58197631 58197927 -8470078 + AluSx SINE Alu 1 296 -16 2316 159 32 53 chr20 58198651 58199124 -8468881 + MLT2B3 LTR ERVL 1 463 -91 2763 212 39 42 chr20 58199125 58199745 -8468260 - MSTD-int LTR MaLR -1039 696 77 2191 115 0 3 chr20 58199745 58200032 -8467973 - AluSx SINE Alu -26 286 1 2763 212 39 42 chr20 58200032 58200109 -8467896 - MSTD-int LTR MaLR -1658 77 1 2272 181 15 5 chr20 58200110 58200502 -8467503 - MSTD LTR MaLR 0 396 1 2366 107 0 0 chr20 58201009 58201308 -8466697 - AluSx SINE Alu -13 299 1 618 291 57 73 chr20 58201509 58201932 -8466073 - MLT1K LTR MaLR -31 557 142 516 274 108 33 chr20 58202506 58202718 -8465287 + Charlie8 DNA MER1_type 38 265 -2152 243 323 81 0 chr20 58202845 58202944 -8465061 + MIR SINE MIR 61 167 -95 * 435 271 100 35 chr20 58202939 58203109 -8464896 - L2 LINE L2 -5 3308 3128 859 243 9 9 chr20 58203181 58203395 -8464610 + MER58A DNA MER1_type 1 214 -10 2310 105 3 0 chr20 58203441 58203735 -8464270 + AluSx SINE Alu 1 295 -17 744 233 34 34 chr20 58204360 58204487 -8463518 + MER45A DNA AcHobo 3 132 -1449 2295 115 0 3 chr20 58204487 58204799 -8463206 - AluSp SINE Alu -2 311 1 744 233 34 34 chr20 58204799 58204847 -8463158 + MER45A DNA AcHobo 131 178 0 418 345 14 0 chr20 58205118 58205260 -8462745 - MIR SINE MIR -45 217 74 310 346 103 0 chr20 58205312 58205448 -8462557 + MIR SINE MIR 101 250 -12 207 283 0 0 chr20 58205454 58205553 -8462452 + (ATG)n Simple_repeat Simple_repeat 1 99 0 840 196 0 0 chr20 58205580 58205759 -8462246 + (ATG)n Simple_repeat Simple_repeat 2 180 0 * 864 141 13 26 chr20 58205736 58205972 -8462033 + (ATGGTG)n Simple_repeat Simple_repeat 1 232 0 1547 197 109 64 chr20 58206085 58206515 -8461490 - MLT1C LTR MaLR 0 467 6 331 171 26 0 chr20 58207819 58207895 -8460110 + GA-rich Low_complexity Low_complexity 4 81 0 2449 83 3 6 chr20 58207930 58208242 -8459763 + AluY SINE Alu 1 311 0 1767 168 7 3 chr20 58208282 58208567 -8459438 - AluJo SINE Alu -26 286 1 24 32 0 0 chr20 58208663 58208694 -8459311 + AT_rich Low_complexity Low_complexity 1 31 0 259 302 69 0 chr20 58208789 58208940 -8459065 - L2 LINE L2 -322 2991 2827 204 221 65 52 chr20 58209600 58209677 -8458328 - L3 LINE CR1 -48 1529 1452 287 239 18 64 chr20 58209877 58209986 -8458019 - MLT1K LTR MaLR -3 585 482 653 296 84 9 chr20 58210087 58210313 -8457692 - MLT1K LTR MaLR -318 270 28 1354 113 9 68 chr20 58210353 58210574 -8457431 - AluSg/x SINE Alu -19 293 86 1001 240 49 67 chr20 58210711 58211102 -8456903 - MLT1K LTR MaLR -165 423 40 1145 111 43 0 chr20 58211474 58211655 -8456350 + AluSg/x SINE Alu 133 312 0 2295 114 16 0 chr20 58211666 58211972 -8456033 + AluSx SINE Alu 2 312 0 482 323 97 9 chr20 58212200 58212417 -8455588 + MIR SINE MIR 23 258 -4 490 255 105 85 chr20 58212558 58212852 -8455153 - MLT1J LTR MaLR -211 300 1 393 287 41 62 chr20 58213009 58213163 -8454842 - Charlie8 DNA MER1_type -65 276 127 2320 86 24 0 chr20 58213163 58213453 -8454552 + AluSx SINE Alu 1 297 -15 393 287 41 62 chr20 58213453 58213542 -8454463 - Charlie8 DNA MER1_type -214 127 38 2187 100 69 0 chr20 58213580 58213871 -8454134 - AluSq SINE Alu -2 311 1 2924 214 58 25 chr20 58213898 58214671 -8453334 - L1ME1 LINE L1 -4 6162 5416 2637 122 23 41 chr20 58214671 58215113 -8452892 - MER57B LTR ERV1 0 434 1 2924 214 58 25 chr20 58215113 58215423 -8452582 - L1ME1 LINE L1 -750 5416 5118 2249 102 0 3 chr20 58215423 58215729 -8452276 - AluSq SINE Alu 0 305 1 2924 214 58 25 chr20 58215729 58215984 -8452021 - L1ME1 LINE L1 -1048 5118 4767 23 54 0 0 chr20 58216032 58216069 -8451936 + AT_rich Low_complexity Low_complexity 1 37 0 748 211 33 58 chr20 58216090 58216332 -8451673 - L1MD3 LINE L1 -15 7980 7745 321 218 124 56 chr20 58216332 58216494 -8451511 + MER104 DNA Tc2 1 180 0 454 272 51 32 chr20 58216502 58216660 -8451345 + MIR SINE MIR 100 260 -2 573 305 73 11 chr20 58217395 58217572 -8450433 + MIR SINE MIR 27 214 -48 1978 160 19 3 chr20 58217574 58217881 -8450124 + AluJb SINE Alu 1 312 0 2138 201 117 67 chr20 58217952 58218321 -8449684 - MLT1E1 LTR MaLR 0 654 240 2419 107 0 0 chr20 58218321 58218630 -8449375 + AluSc SINE Alu 1 309 0 2138 201 117 67 chr20 58218630 58218883 -8449122 - MLT1E1 LTR MaLR -414 240 1 425 143 0 71 chr20 58219040 58219124 -8448881 - MSTA LTR MaLR -130 298 221 1907 123 153 0 chr20 58219130 58219463 -8448542 + MSTA LTR MaLR 45 428 0 640 305 91 0 chr20 58219628 58219838 -8448167 - MIR SINE MIR -20 242 14 278 371 0 0 chr20 58220242 58220347 -8447658 + MIR SINE MIR 134 238 -24 408 191 118 27 chr20 58220348 58220458 -8447547 + L1PB4 LINE L1 6037 6156 0 239 345 34 25 chr20 58220879 58220998 -8447007 + L2 LINE L2 3153 3272 0 227 43 43 43 chr20 58221104 58221151 -8446854 - Alu SINE Alu 0 300 254 480 278 11 17 chr20 58221294 58221470 -8446535 - L1MC5 LINE L1 -178 7783 7609 366 169 113 0 chr20 58221764 58221835 -8446170 - L1M4 LINE L1 -5187 1355 1277 2083 97 4 4 chr20 58221837 58222115 -8445890 - AluSx SINE Alu -1 311 34 600 204 37 78 chr20 58222150 58222225 -8445780 + MER106A DNA MER1_type 1 78 -158 916 119 8 15 chr20 58222225 58222359 -8445646 - FLAM_C SINE Alu 0 133 1 600 204 37 78 chr20 58222359 58222528 -8445477 + MER106A DNA MER1_type 78 235 -1 459 208 169 15 chr20 58222541 58222671 -8445334 + MIR SINE MIR 112 261 -1 204 239 22 0 chr20 58222885 58222931 -8445074 - MIR SINE MIR -105 157 111 567 241 112 86 chr20 58223704 58223936 -8444069 + MIR SINE MIR 21 258 -4 431 277 129 18 chr20 58223934 58224024 -8443981 + L2 LINE L2 2790 2869 -444 * 867 67 40 0 chr20 58224024 58224173 -8443832 + (TCCCC)n Simple_repeat Simple_repeat 4 158 0 431 277 129 18 chr20 58224173 58224341 -8443664 + L2 LINE L2 2869 3065 -248 524 247 74 42 chr20 58224580 58224770 -8443235 - MIR SINE MIR -44 218 23 2241 109 3 0 chr20 58224782 58225076 -8442929 - AluSx SINE Alu -17 295 1 669 212 7 7 chr20 58225518 58225669 -8442336 + MER20 DNA MER1_type 10 160 -59 1303 192 14 14 chr20 58225717 58226003 -8442002 + MER33 DNA MER1_type 35 320 -4 216 342 36 18 chr20 58226009 58226120 -8441885 + L2 LINE L2 3150 3262 -10 1032 166 19 8 chr20 58226159 58226602 -8441403 + GA-rich Low_complexity Low_complexity 1 629 0 2245 113 0 3 chr20 58227195 58227505 -8440500 + AluSx SINE Alu 1 309 -3 1045 275 63 11 chr20 58227962 58228340 -8439665 - L1ME4a LINE L1 -226 5895 5498 328 272 127 49 chr20 58228365 58228529 -8439476 - L1ME4a LINE L1 -57 6064 5914 216 67 0 0 chr20 58228529 58228559 -8439446 + (TTTTA)n Simple_repeat Simple_repeat 1 30 0 2013 128 0 7 chr20 58228559 58228841 -8439164 - AluSx SINE Alu -32 280 1 328 272 127 49 chr20 58228841 58229061 -8438944 - L1ME4a LINE L1 -206 5915 5649 530 296 57 63 chr20 58229063 58229494 -8438511 - L1ME4a LINE L1 -502 5619 5149 1454 161 98 9 chr20 58229496 58229670 -8438335 - L1MA8 LINE L1 -13 6278 6121 2276 102 10 0 chr20 58229670 58229965 -8438040 + AluSx SINE Alu 1 298 -14 1454 161 98 9 chr20 58229965 58230107 -8437898 - L1MA8 LINE L1 -170 6121 5933 847 84 0 0 chr20 58230127 58230234 -8437771 - U6 snRNA snRNA 0 107 1 219 103 0 0 chr20 58230581 58230610 -8437395 + MIR SINE MIR 116 144 -64 226 252 27 18 chr20 58230730 58230841 -8437164 + L1M4 LINE L1 5122 5233 -913 237 65 0 0 chr20 58230991 58231022 -8436983 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 2157 130 0 0 chr20 58231081 58231381 -8436624 - AluSx SINE Alu -1 311 12 2186 108 7 3 chr20 58231393 58231690 -8436315 - AluSx SINE Alu -5 307 10 316 276 70 45 chr20 58232172 58232328 -8435677 + L3b LINE CR1 1289 1448 -135 185 138 0 0 chr20 58232474 58232503 -8435502 - MIR SINE MIR -118 144 116 244 336 78 6 chr20 58232506 58232735 -8435270 - L2 LINE L2 -6 3307 3014 650 310 82 17 chr20 58232808 58233224 -8434781 - MLT1K LTR MaLR -9 579 137 2240 126 0 3 chr20 58233645 58234009 -8433996 - AluSg SINE Alu 0 363 1 2330 109 0 0 chr20 58234396 58234698 -8433307 + AluSx SINE Alu 1 302 -10 419 338 0 7 chr20 58234716 58234858 -8433147 + MIR SINE MIR 15 155 -107 222 276 110 31 chr20 58234838 58234965 -8433040 - L2 LINE L2 -906 2408 2272 * 307 202 22 0 chr20 58235842 58235931 -8432074 + (TCCA)n Simple_repeat Simple_repeat 2 92 0 294 95 0 0 chr20 58235925 58235967 -8432038 + (TTCC)n Simple_repeat Simple_repeat 1 42 0 * 1969 165 7 0 chr20 58236288 58236585 -8431420 - AluJb SINE Alu -13 299 1 264 111 0 93 chr20 58236633 58236687 -8431318 - LTR67 LTR ERVL -2 555 507 * 1178 180 27 23 chr20 58236679 58237137 -8430868 + MLT1D LTR MaLR 6 505 0 2233 123 0 13 chr20 58237152 58237453 -8430552 - AluSx SINE Alu -15 297 1 860 192 39 43 chr20 58238224 58238432 -8429573 - MER20 DNA MER1_type -12 207 1 263 291 106 69 chr20 58238445 58238806 -8429199 + L2 LINE L2 2564 2910 -362 2368 107 0 0 chr20 58238806 58239106 -8428899 - AluSg SINE Alu -10 300 1 2394 102 3 0 chr20 58239107 58239411 -8428594 - AluSx SINE Alu -7 305 1 263 291 106 69 chr20 58239411 58239479 -8428526 + L2 LINE L2 2909 3015 -257 295 184 79 16 chr20 58239627 58239792 -8428213 - MLT1J LTR MaLR -202 309 95 420 295 76 56 chr20 58239844 58239978 -8428027 + L2 LINE L2 3005 3135 -178 2395 90 0 16 chr20 58239978 58240288 -8427717 - AluSx SINE Alu -3 309 5 420 295 76 56 chr20 58240288 58240441 -8427564 + L2 LINE L2 3135 3298 -15 239 269 21 54 chr20 58240961 58241054 -8426951 - L2 LINE L2 -47 3225 3136 255 106 0 21 chr20 58241126 58241173 -8426832 + L1MA9 LINE L1 6262 6307 -5 234 302 29 29 chr20 58241226 58241365 -8426640 - L2 LINE L2 -213 3059 2921 1440 201 33 86 chr20 58241381 58241688 -8426317 - MLT1C LTR MaLR -5 462 189 2388 101 10 0 chr20 58241688 58241995 -8426010 + AluSg SINE Alu 1 310 0 1440 201 33 86 chr20 58241995 58242175 -8425830 - MLT1C LTR MaLR -278 189 1 570 335 114 17 chr20 58242273 58242676 -8425329 - L2 LINE L2 -547 2767 2326 1222 242 81 10 chr20 58242676 58243141 -8424864 + MLT1H LTR MaLR 1 541 -8 203 296 66 71 chr20 58243141 58243337 -8424668 - L2 LINE L2 -980 2334 2140 1181 233 127 45 chr20 58243559 58244022 -8423983 + MLT1H LTR MaLR 11 511 -38 329 270 103 32 chr20 58244022 58244148 -8423857 + MIR SINE MIR 128 262 0 326 322 133 11 chr20 58244213 58244393 -8423612 - L1ME LINE L1 -384 5778 5577 293 123 0 35 chr20 58244985 58245042 -8422963 + (TCTCCC)n Simple_repeat Simple_repeat 5 59 0 978 172 0 0 chr20 58245046 58245203 -8422802 - AluSg/x SINE Alu -10 302 146 309 98 0 0 chr20 58245203 58245244 -8422761 - Alu SINE Alu -259 41 1 2144 105 10 14 chr20 58245483 58245777 -8422228 - AluY SINE Alu -18 293 1 2001 166 0 0 chr20 58245782 58246077 -8421928 - AluJb SINE Alu -16 296 2 2393 92 0 7 chr20 58247670 58247974 -8420031 + AluSx SINE Alu 1 302 -10 2222 63 4 0 chr20 58248126 58248394 -8419611 - AluY SINE Alu -8 303 35 227 35 0 0 chr20 58248394 58248423 -8419582 - Alu SINE Alu -218 83 55 689 19 19 48 chr20 58248423 58248527 -8419478 - AluY SINE Alu -216 102 2 186 191 0 0 chr20 58249121 58249168 -8418837 + (CA)n Simple_repeat Simple_repeat 1 47 0 443 256 13 6 chr20 58249185 58249341 -8418664 + (CA)n Simple_repeat Simple_repeat 1 157 0 332 220 6 0 chr20 58249386 58249705 -8418300 + (CA)n Simple_repeat Simple_repeat 1 321 0 219 202 0 0 chr20 58249719 58249808 -8418197 + (CA)n Simple_repeat Simple_repeat 1 89 0 351 340 69 21 chr20 58250305 58250493 -8417512 + MIR SINE MIR 25 221 -41 1810 179 3 3 chr20 58250658 58250959 -8417046 - AluJb SINE Alu -11 301 1 370 226 78 17 chr20 58251036 58251151 -8416854 + L2 LINE L2 3142 3263 -9 209 237 0 51 chr20 58252095 58252154 -8415851 + MIR SINE MIR 90 145 -63 184 303 28 101 chr20 58253401 58253510 -8414495 - L2 LINE L2 0 3272 3172 694 292 41 9 chr20 58253563 58253782 -8414223 - MIR SINE MIR -22 240 15 537 336 43 0 chr20 58253834 58254066 -8413939 - L2 LINE L2 -161 3111 2870 1199 276 108 43 chr20 58254216 58254771 -8413234 + MLT1G1 LTR MaLR 1 591 -4 708 273 43 35 chr20 58254781 58254915 -8413090 + MLT1L LTR MaLR 162 300 -315 1946 167 0 19 chr20 58254915 58255233 -8412772 + AluJb SINE Alu 1 312 0 708 273 43 35 chr20 58255233 58255329 -8412676 + MLT1L LTR MaLR 300 394 -221 241 289 139 84 chr20 58255882 58256018 -8411987 + MIR SINE MIR 11 159 -103 1986 116 39 3 chr20 58256018 58256302 -8411703 + AluSq SINE Alu 1 294 -19 241 289 139 84 chr20 58256302 58256331 -8411674 + MIR SINE MIR 159 185 -77 696 263 61 18 chr20 58256331 58256559 -8411446 - MLT1K LTR MaLR -4 584 347 2061 128 7 0 chr20 58256903 58257208 -8410797 - MSTA LTR MaLR 0 428 122 747 201 0 19 chr20 58257418 58257572 -8410433 - MER20 DNA MER1_type 0 219 69 756 124 0 0 chr20 58257577 58257690 -8410315 - MSTA LTR MaLR -314 114 2 3139 100 25 31 chr20 58257760 58257771 -8410234 - L1PA10 LINE L1 -10 6158 6148 366 23 0 0 chr20 58257771 58257814 -8410191 + (TTTAA)n Simple_repeat Simple_repeat 3 45 0 3139 100 25 31 chr20 58257814 58258175 -8409830 - L1PA10 LINE L1 -20 6148 5786 2311 96 0 0 chr20 58258175 58258485 -8409520 - AluSg SINE Alu 0 310 1 3139 100 25 31 chr20 58258485 58258622 -8409383 - L1PA10 LINE L1 -382 5786 5650 1854 205 4 60 chr20 58258664 58259143 -8408862 - L1MB3 LINE L1 -1 6182 5731 1950 104 89 0 chr20 58259362 58259642 -8408363 - AluSx SINE Alu -7 305 1 208 237 0 0 chr20 58260126 58260164 -8407841 + (CAG)n Simple_repeat Simple_repeat 1 38 0 359 321 66 25 chr20 58260313 58260615 -8407390 + L2 LINE L2 2722 3035 -237 986 218 14 9 chr20 58260705 58260921 -8407084 - MER20 DNA MER1_type 0 219 3 1138 216 35 4 chr20 58261214 58261516 -8406489 + MER33 DNA MER1_type 1 302 -22 395 143 0 0 chr20 58261823 58261890 -8406115 + AluJ/FRAM SINE Alu 232 290 -12 770 280 24 64 chr20 58261907 58262203 -8405802 - MLT1J LTR MaLR -5 506 223 214 346 64 0 chr20 58262204 58262282 -8405723 - L2 LINE L2 -9 3263 3181 368 252 67 15 chr20 58262290 58262425 -8405580 + L2 LINE L2 2425 2566 -748 190 114 57 0 chr20 58262449 58262484 -8405521 + L2 LINE L2 3008 3044 -269 227 152 22 0 chr20 58262511 58262557 -8405448 + GA-rich Low_complexity Low_complexity 4 50 0 369 102 17 0 chr20 58262582 58262641 -8405364 - Alu SINE Alu -10 291 232 201 290 92 30 chr20 58262720 58262851 -8405154 + MIR SINE MIR 118 256 -6 1067 189 38 5 chr20 58263439 58263651 -8404354 - MER20 DNA MER1_type 0 219 1 744 210 12 0 chr20 58264770 58264932 -8403073 + L1MD1 LINE L1 6079 6242 0 323 226 202 24 chr20 58264978 58265102 -8402903 - MIR SINE MIR -112 150 5 374 285 177 13 chr20 58265249 58265594 -8402411 - L2 LINE L2 -221 3051 2658 621 275 49 49 chr20 58265600 58265844 -8402161 - L2 LINE L2 -18 3295 3052 230 290 101 74 chr20 58266543 58266686 -8401319 + L1ME LINE L1 5444 5582 -539 1544 191 0 38 chr20 58266686 58266979 -8401026 - AluJo SINE Alu -18 294 13 230 290 101 74 chr20 58266979 58267200 -8400805 + L1ME LINE L1 5582 5818 -303 2772 163 15 32 chr20 58267210 58267558 -8400447 + L1MC3 LINE L1 7241 7578 -207 2519 87 3 0 chr20 58267558 58267867 -8400138 + AluSp SINE Alu 2 311 -2 2772 163 15 32 chr20 58267867 58268051 -8399954 + L1MC3 LINE L1 7578 7764 -21 1661 151 0 53 chr20 58268068 58268367 -8399638 + AluJo SINE Alu 20 302 -10 2272 132 3 0 chr20 58268915 58269226 -8398779 - AluSx SINE Alu 0 312 1 258 331 153 6 chr20 58269357 58269514 -8398491 - MIR SINE MIR -70 192 13 999 158 6 0 chr20 58270176 58270341 -8397664 + FRAM SINE Alu 1 166 0 513 245 103 13 chr20 58272037 58272192 -8395813 - MER20 DNA MER1_type -17 202 34 758 193 28 6 chr20 58272207 58272383 -8395622 - MER53 DNA DNA -9 180 1 469 308 41 6 chr20 58272683 58272855 -8395150 + MLT1K LTR MaLR 164 341 -247 289 277 21 21 chr20 58272898 58272992 -8395013 + MLT1K LTR MaLR 463 556 -32 625 294 197 0 chr20 58273420 58273750 -8394255 + L2 LINE L2 2919 3313 0 221 260 58 48 chr20 58273777 58273881 -8394124 + L2 LINE L2 3168 3272 0 202 330 22 0 chr20 58274062 58274153 -8393852 + MIR SINE MIR 136 228 -34 188 308 39 0 chr20 58274205 58274283 -8393722 - MIR3 SINE MIR -54 154 74 2047 131 3 3 chr20 58274992 58275283 -8392722 + AluSg SINE Alu 2 292 -18 442 285 7 49 chr20 58275392 58275432 -8392573 - MIR SINE MIR -71 191 151 3814 94 7 7 chr20 58275432 58275986 -8392019 + MER41A LTR ERV1 1 554 0 442 285 7 49 chr20 58275986 58276089 -8391916 - MIR SINE MIR -111 151 54 3584 94 46 24 chr20 58276272 58276487 -8391518 - MER41A LTR ERV1 0 554 345 2393 78 0 0 chr20 58276487 58276781 -8391224 - AluY SINE Alu -17 294 1 3584 94 46 24 chr20 58276781 58277107 -8390898 - MER41A LTR ERV1 -209 345 1 570 231 34 0 chr20 58277212 58277359 -8390646 + MIR SINE MIR 70 221 -41 291 240 27 13 chr20 58277888 58277963 -8390042 - MIR SINE MIR -113 149 74 509 157 29 0 chr20 58278480 58278582 -8389423 - MER53 DNA DNA -84 105 1 429 246 0 26 chr20 58278718 58278832 -8389173 + MER81 DNA DNA 4 114 0 420 153 20 67 chr20 58279040 58279190 -8388815 + MER113 DNA MER1_type? 99 241 -280 2493 201 11 0 chr20 58279515 58279992 -8388013 + Tigger6a DNA MER2_type 7 488 -595 286 293 12 0 chr20 58280056 58280138 -8387867 - MER117 DNA MER1_type -1 196 114 726 289 46 5 chr20 58280167 58280385 -8387620 + MIR SINE MIR 31 257 -5 297 306 31 0 chr20 58280411 58280509 -8387496 - MER117 DNA MER1_type -96 101 1 381 323 109 15 chr20 58281491 58281692 -8386313 - MIR SINE MIR -14 248 29 494 280 95 0 chr20 58282469 58282658 -8385347 + MLT1L LTR MaLR 405 611 -4 257 276 0 13 chr20 58282970 58283046 -8384959 + GA-rich Low_complexity Low_complexity 2 76 0 313 157 0 0 chr20 58283270 58283321 -8384684 + L2 LINE L2 3186 3236 -36 796 158 0 25 chr20 58283331 58283576 -8384429 + (TGGA)n Simple_repeat Simple_repeat 1 238 0 549 180 12 29 chr20 58283624 58283796 -8384209 + (TGGA)n Simple_repeat Simple_repeat 3 171 0 577 221 60 7 chr20 58283945 58284094 -8383911 - MER5A DNA MER1_type -30 159 3 2364 163 39 5 chr20 58284119 58284556 -8383449 - MER66A LTR ERV1 0 478 27 2120 195 38 17 chr20 58284949 58285425 -8382580 + MER66B LTR ERV1 1 486 0 701 283 42 29 chr20 58285517 58285825 -8382180 + LTR16A1 LTR ERVL 146 457 0 7522 185 107 28 chr20 58286314 58287940 -8380065 + MER52A LTR ERV1 1 1754 -1 378 282 19 0 chr20 58288411 58288514 -8379491 - MIR SINE MIR -107 155 51 444 353 138 13 chr20 58288524 58288974 -8379031 + L2 LINE L2 2807 3312 -1 390 179 200 0 chr20 58289261 58289356 -8378649 + MER81 DNA DNA 1 114 0 628 273 22 72 chr20 58289421 58289755 -8378250 - MLT1J LTR MaLR -110 401 54 501 248 9 9 chr20 58289823 58289928 -8378077 - MER81 DNA DNA -2 112 8 310 321 136 27 chr20 58290520 58290704 -8377301 - MIR SINE MIR -32 230 27 327 244 26 0 chr20 58291327 58291405 -8376600 + MIR SINE MIR 113 192 -70 420 200 0 0 chr20 58291500 58291595 -8376410 + GA-rich Low_complexity Low_complexity 1 95 0 1797 161 33 0 chr20 58291631 58291941 -8376064 + AluJo SINE Alu 1 319 0 2119 149 0 0 chr20 58291995 58292304 -8375701 + AluSx SINE Alu 1 309 -3 373 317 0 0 chr20 58292314 58292437 -8375568 + MIR SINE MIR 136 258 -4 282 269 67 8 chr20 58292458 58292577 -8375428 + MIR SINE MIR 137 262 0 255 303 0 0 chr20 58293207 58293326 -8374679 + (TATG)n Simple_repeat Simple_repeat 4 122 0 254 235 0 0 chr20 58293344 58293395 -8374610 + MER4-int LTR ERV1 1112 1162 -5436 238 231 14 41 chr20 58293417 58293564 -8374441 + (TATG)n Simple_repeat Simple_repeat 3 145 0 733 282 56 20 chr20 58293728 58293980 -8374025 - Charlie8 DNA MER1_type -2144 273 13 684 166 24 142 chr20 58294078 58294167 -8373838 + MER20 DNA MER1_type 2 100 -119 261 0 0 0 chr20 58294167 58294196 -8373809 + (TGG)n Simple_repeat Simple_repeat 1 29 0 684 166 24 142 chr20 58294196 58294299 -8373706 + MER20 DNA MER1_type 100 161 -58 2308 128 0 0 chr20 58294299 58294612 -8373393 + AluSq SINE Alu 1 313 0 684 166 24 142 chr20 58294612 58294665 -8373340 + MER20 DNA MER1_type 161 219 0 467 304 84 22 chr20 58294811 58294960 -8373045 - MIR SINE MIR -21 241 72 200 35 35 0 chr20 58294960 58294989 -8373016 + (CA)n Simple_repeat Simple_repeat 1 30 0 467 304 84 22 chr20 58294989 58295066 -8372939 - MIR SINE MIR -190 72 1 297 323 184 32 chr20 58295096 58295406 -8372599 + L2 LINE L2 2916 3272 0 782 235 11 27 chr20 58295464 58295647 -8372358 - MIR SINE MIR -18 244 65 398 301 98 73 chr20 58295843 58296282 -8371723 - L1 LINE L1 -754 5392 4943 437 263 150 6 chr20 58296828 58296988 -8371017 - MIR SINE MIR -41 221 39 249 355 18 31 chr20 58297023 58297135 -8370870 + L1ME LINE L1 5595 5707 -414 1711 178 3 23 chr20 58297135 58297444 -8370561 - AluJb SINE Alu -9 303 1 249 355 18 31 chr20 58297444 58297559 -8370446 + L1ME LINE L1 5707 5819 -302 1007 173 34 43 chr20 58297707 58297915 -8370090 - MER20 DNA MER1_type -13 206 1 2226 116 0 19 chr20 58297921 58298232 -8369773 + AluSx SINE Alu 1 305 -7 216 0 0 0 chr20 58298260 58298284 -8369721 + (TCCC)n Simple_repeat Simple_repeat 3 26 0 573 300 114 17 chr20 58298289 58298579 -8369426 + L2 LINE L2 2996 3313 0 657 273 35 15 chr20 58298591 58298789 -8369216 - MIR SINE MIR -6 256 55 2121 140 0 3 chr20 58299028 58299336 -8368669 - AluSx SINE Alu -5 307 1 210 290 50 10 chr20 58299681 58299781 -8368224 + L2 LINE L2 2950 3053 -219 1003 266 97 29 chr20 58299836 58300219 -8367786 + MLT1C LTR MaLR 59 467 0 394 269 78 42 chr20 58300272 58300439 -8367566 + MIR SINE MIR 90 262 0 363 309 134 50 chr20 58300564 58300678 -8367327 + L1ME4a LINE L1 5716 5819 -302 2228 113 3 0 chr20 58300678 58300971 -8367034 + AluSq SINE Alu 2 295 -18 363 309 134 50 chr20 58300971 58301118 -8366887 + L1ME4a LINE L1 5819 5999 -122 236 167 56 0 chr20 58301146 58301200 -8366805 + GA-rich Low_complexity Low_complexity 2 58 0 193 139 56 0 chr20 58301337 58301373 -8366632 + MIR SINE MIR 105 142 -120 414 252 173 0 chr20 58301384 58301540 -8366465 + MIR SINE MIR 61 247 -15 416 246 136 0 chr20 58302870 58302988 -8365017 + MER45A DNA AcHobo 1 134 -44 281 171 200 0 chr20 58303149 58303219 -8364786 + L2 LINE L2 2967 3050 -263 413 214 11 0 chr20 58304162 58304251 -8363754 - MER81 DNA DNA -5 109 20 198 88 18 53 chr20 58304328 58304385 -8363620 + (CCCCCT)n Simple_repeat Simple_repeat 5 59 0 2008 176 40 9 chr20 58304666 58305092 -8362913 - L1MB2 LINE L1 -2 6169 5731 509 331 0 0 chr20 58305340 58305479 -8362526 - MIR SINE MIR -19 243 105 261 314 38 0 chr20 58306230 58306335 -8361670 - L1ME4a LINE L1 -1 6120 6012 654 230 50 63 chr20 58306749 58306971 -8361034 - MER20 DNA MER1_type 0 219 1 279 79 0 0 chr20 58307717 58307755 -8360250 + (TG)n Simple_repeat Simple_repeat 2 39 0 455 306 90 59 chr20 58307940 58308228 -8359777 - L1ME4a LINE L1 -18 6103 5807 291 229 10 0 chr20 58308239 58308303 -8359702 + MER91B DNA MER1_type 1 68 -128 230 294 63 0 chr20 58308407 58308533 -8359472 + L1ME1 LINE L1 5951 6084 -82 834 149 16 0 chr20 58308547 58308668 -8359337 + FLAM_C SINE Alu 1 123 -20 258 81 0 0 chr20 58308668 58308705 -8359300 + (CA)n Simple_repeat Simple_repeat 2 38 0 324 197 0 0 chr20 58308715 58308786 -8359219 + L1MB7 LINE L1 6109 6179 -5 345 222 22 33 chr20 58308830 58308920 -8359085 - MIR SINE MIR -89 173 85 1752 169 31 29 chr20 58309908 58310293 -8357712 + L1MC1 LINE L1 5762 6147 -186 1935 181 0 0 chr20 58310293 58310592 -8357413 + AluJb SINE Alu 1 299 -13 2204 108 31 0 chr20 58310600 58310886 -8357119 + AluSx SINE Alu 3 297 -15 513 253 81 105 chr20 58310895 58311180 -8356825 + L2 LINE L2 3036 3313 0 326 308 104 71 chr20 58311475 58311686 -8356319 + MIR SINE MIR 10 227 -35 367 354 106 16 chr20 58311703 58312014 -8355991 - L2 LINE L2 -17 3255 2917 2529 220 21 13 chr20 58312234 58312766 -8355239 - MLT1F LTR MaLR -4 538 3 2134 118 0 3 chr20 58313651 58313938 -8354067 + AluSx SINE Alu 1 286 -26 588 251 73 21 chr20 58314515 58314706 -8353299 - MIR SINE MIR -3 259 59 2325 80 0 45 chr20 58314835 58315148 -8352857 + AluY SINE Alu 1 299 -12 424 330 11 62 chr20 58315251 58315605 -8352400 + L1MC4a LINE L1 5604 5939 -1869 195 42 0 0 chr20 58315789 58315813 -8352192 + (TA)n Simple_repeat Simple_repeat 2 25 0 248 302 53 53 chr20 58316647 58316836 -8351169 - MIR SINE MIR -35 227 39 222 305 114 9 chr20 58316949 58317054 -8350951 + L2 LINE L2 3152 3267 -5 743 185 22 22 chr20 58317080 58317392 -8350613 + GA-rich Low_complexity Low_complexity 1 312 0 256 253 185 19 chr20 58317503 58317665 -8350340 + MLT1J2 LTR MaLR 259 447 -3 1791 125 60 12 chr20 58317932 58318251 -8349754 - MER1B DNA MER1_type 0 337 4 780 194 129 22 chr20 58318378 58318610 -8349395 - LTR16A1 LTR ERVL 0 457 201 536 271 43 57 chr20 58318888 58319113 -8348892 - MIR SINE MIR -35 227 3 537 292 125 6 chr20 58319601 58319769 -8348236 + MIR SINE MIR 27 214 -48 1803 282 50 53 chr20 58319943 58320187 -8347818 - L1ME LINE L1 -4822 1439 1196 2416 82 0 3 chr20 58320187 58320490 -8347515 - AluY SINE Alu -9 302 1 1803 282 50 53 chr20 58320490 58320864 -8347141 - L1ME LINE L1 -5065 1196 823 2274 112 7 3 chr20 58320864 58321160 -8346845 + AluSx SINE Alu 3 299 -13 1803 282 50 53 chr20 58321160 58321860 -8346145 - L1ME LINE L1 -5438 823 58 182 267 0 116 chr20 58321870 58321956 -8346049 - MIR3 SINE MIR -52 156 81 846 309 104 9 chr20 58321973 58322404 -8345601 - L2 LINE L2 -15 3298 2827 2818 96 0 3 chr20 58322422 58322787 -8345218 + THE1B LTR MaLR 1 364 0 4900 50 67 3 chr20 58323012 58323660 -8344345 + L1PA7 LINE L1 5474 6161 0 647 286 28 61 chr20 58323667 58323848 -8344157 - MIR SINE MIR -30 232 64 1972 142 0 0 chr20 58323848 58324157 -8343848 + AluJb SINE Alu 1 309 0 647 286 28 61 chr20 58324157 58324206 -8343799 - MIR SINE MIR -198 64 15 486 283 21 14 chr20 58324436 58324581 -8343424 + MER58A DNA MER1_type 3 148 0 468 148 11 11 chr20 58324581 58324665 -8343340 + MER53 DNA DNA 104 187 -2 2532 58 0 6 chr20 58325426 58325737 -8342268 - AluY SINE Alu -1 310 2 335 271 24 0 chr20 58325910 58325995 -8342010 - MIR SINE MIR -75 133 47 23 0 0 0 chr20 58326049 58326072 -8341933 + AT_rich Low_complexity Low_complexity 1 23 0 2325 99 30 0 chr20 58326072 58326374 -8341631 + AluSx SINE Alu 1 311 -1 2165 98 14 3 chr20 58327074 58327369 -8340636 - AluSq SINE Alu -15 298 1 2162 127 35 49 chr20 58327403 58327772 -8340233 + THE1B LTR MaLR 1 364 0 199 269 181 71 chr20 58328029 58328100 -8339905 + L2 LINE L2 2815 2877 -395 4294 80 0 31 chr20 58328100 58328497 -8339508 - MER41A LTR ERV1 0 554 179 2280 116 7 0 chr20 58328497 58328807 -8339198 - AluSx SINE Alu 0 312 1 4294 80 0 31 chr20 58328807 58328981 -8339024 - MER41A LTR ERV1 -375 179 1 199 269 181 71 chr20 58328981 58329273 -8338732 + L2 LINE L2 2877 3218 -54 367 294 21 71 chr20 58329327 58329416 -8338589 + MIR SINE MIR 63 133 -129 2127 114 37 0 chr20 58329416 58329713 -8338292 + AluSq SINE Alu 1 308 -5 367 294 21 71 chr20 58329713 58329819 -8338186 + MIR SINE MIR 133 243 -19 317 216 113 21 chr20 58329798 58329895 -8338110 - L2 LINE L2 -3 3310 3205 * 260 253 209 22 chr20 58330016 58330107 -8337898 + MIR SINE MIR 96 203 -59 330 327 110 22 chr20 58330126 58330672 -8337333 - L2 LINE L2 -170 3143 2492 1966 142 22 19 chr20 58330682 58330884 -8337121 + AluJo SINE Alu 1 206 -106 4286 81 5 25 chr20 58330884 58331042 -8336963 + MER41A LTR ERV1 1 161 -393 2121 109 0 7 chr20 58331042 58331372 -8336633 + AluSg SINE Alu 1 328 0 4286 81 5 25 chr20 58331372 58331777 -8336228 + MER41A LTR ERV1 161 554 0 1966 142 22 19 chr20 58331777 58331885 -8336120 + AluJo SINE Alu 206 312 0 21 0 0 0 chr20 58332097 58332118 -8335887 + AT_rich Low_complexity Low_complexity 1 21 0 2434 96 0 3 chr20 58333880 58334193 -8333812 - AluSx SINE Alu 0 312 1 4846 167 62 40 chr20 58334467 58334548 -8333457 + L1MC3 LINE L1 6637 6715 -1070 1857 149 3 3 chr20 58334548 58334836 -8333169 + AluSx SINE Alu 7 294 -18 4846 167 62 40 chr20 58334836 58335877 -8332128 + L1MC3 LINE L1 6715 7784 -1 2358 117 0 0 chr20 58336068 58336376 -8331629 + AluSx SINE Alu 1 308 -4 347 253 89 20 chr20 58336385 58336531 -8331474 + MLT1K LTR MaLR 411 566 -22 2234 99 0 10 chr20 58337064 58337367 -8330638 - AluSg SINE Alu -10 300 1 429 208 109 0 chr20 58338080 58338181 -8329824 - L2 LINE L2 0 3313 3202 976 197 33 33 chr20 58338539 58338752 -8329253 - MSTD LTR MaLR 0 396 184 836 86 0 16 chr20 58338753 58338881 -8329124 + (TTCC)n Simple_repeat Simple_repeat 1 126 0 1569 97 12 47 chr20 58338881 58339000 -8329005 - L1PA8 LINE L1 0 6172 6050 2192 103 26 19 chr20 58339000 58339310 -8328695 - AluSx SINE Alu 0 312 1 1569 97 12 47 chr20 58339310 58339447 -8328558 - L1PA8 LINE L1 -122 6050 5925 422 207 71 73 chr20 58339450 58339609 -8328396 - MSTC LTR MaLR -238 158 1 618 258 102 70 chr20 58339732 58340169 -8327836 + L2 LINE L2 2643 3065 -248 1643 157 20 31 chr20 58340169 58340462 -8327543 - AluJo SINE Alu -10 302 13 618 258 102 70 chr20 58340462 58340521 -8327484 + L2 LINE L2 3065 3121 -192 207 0 0 0 chr20 58340521 58340544 -8327461 + (TTG)n Simple_repeat Simple_repeat 2 24 0 618 258 102 70 chr20 58340544 58340703 -8327302 + L2 LINE L2 3121 3299 -14 717 63 0 0 chr20 58340707 58340802 -8327203 + (TGAA)n Simple_repeat Simple_repeat 4 98 0 311 314 36 29 chr20 58341524 58341661 -8326344 + MIR SINE MIR 54 191 -71 212 194 0 0 chr20 58342418 58342454 -8325551 + T-rich Low_complexity Low_complexity 1 36 0 1446 128 115 0 chr20 58342455 58342673 -8325332 - AluSg SINE Alu -63 247 5 241 314 58 0 chr20 58342926 58343012 -8324993 - MIR SINE MIR -14 248 158 2018 122 61 22 chr20 58343559 58343920 -8324085 - THE1C LTR MaLR 0 375 1 308 250 34 45 chr20 58344014 58344102 -8323903 + MIR SINE MIR 17 103 -159 205 189 0 0 chr20 58344107 58344144 -8323861 + (TTCA)n Simple_repeat Simple_repeat 2 38 0 544 273 207 4 chr20 58344201 58344443 -8323562 + MER110 LTR ERV1 46 336 -155 1016 312 35 37 chr20 58344492 58344687 -8323318 - L2 LINE L2 -47 3266 3072 2343 107 3 0 chr20 58344687 58344997 -8323008 - AluSx SINE Alu -1 311 1 1016 312 35 37 chr20 58344997 58345386 -8322619 - L2 LINE L2 -241 3072 2686 375 221 29 58 chr20 58345404 58345433 -8322572 - MER58A DNA MER1_type -2197 223 195 2173 225 36 16 chr20 58345433 58345926 -8322079 + MLT1D LTR MaLR 1 503 -2 375 221 29 58 chr20 58345926 58346000 -8322005 - MER58A DNA MER1_type -2225 195 123 226 154 26 0 chr20 58346015 58346054 -8321951 - MER58A DNA MER1_type -184 40 1 199 284 0 123 chr20 58346054 58346137 -8321868 + MIR SINE MIR 126 183 -79 2138 138 3 3 chr20 58346137 58346449 -8321556 + AluSx SINE Alu 1 312 0 199 284 0 123 chr20 58346449 58346520 -8321485 + MIR SINE MIR 183 261 -1 345 172 53 52 chr20 58347513 58347618 -8320387 + MLT1H LTR MaLR 11 159 -390 297 193 11 80 chr20 58347840 58347928 -8320077 + MLT1H LTR MaLR 477 548 -1 274 257 128 0 chr20 58348258 58348367 -8319638 + MLT1L LTR MaLR 168 290 -325 508 183 176 139 chr20 58348456 58348585 -8319420 + MLT1E2 LTR MaLR 64 187 -439 2473 86 0 0 chr20 58348585 58348889 -8319116 + AluY SINE Alu 1 304 -7 508 183 176 139 chr20 58348889 58349098 -8318907 + MLT1E2 LTR MaLR 187 377 -249 244 336 106 9 chr20 58349572 58349685 -8318320 + MER5C DNA MER1_type 1 124 -200 246 149 0 149 chr20 58349839 58349926 -8318079 + MER5C DNA MER1_type 249 322 -2 228 229 30 67 chr20 58350326 58350425 -8317580 - MIR SINE MIR -24 184 84 579 261 123 40 chr20 58350493 58350552 -8317453 - MLT1J LTR MaLR -22 489 436 2310 88 3 17 chr20 58350552 58350892 -8317113 - AluSp SINE Alu 0 313 1 579 261 123 40 chr20 58350892 58351085 -8316920 - MLT1J LTR MaLR -75 436 216 326 287 131 44 chr20 58351199 58351589 -8316416 - MLT1H LTR MaLR -114 435 12 331 244 12 0 chr20 58351598 58351680 -8316325 - MLT1J LTR MaLR -327 184 102 2191 108 0 0 chr20 58351940 58352219 -8315786 - AluSg SINE Alu -17 293 15 1960 110 0 0 chr20 58352219 58352464 -8315541 - AluSx SINE Alu -67 245 1 545 234 52 36 chr20 58352597 58352789 -8315216 + Charlie8 DNA MER1_type 1 195 -2222 338 243 100 43 chr20 58352852 58352992 -8315013 + L2 LINE L2 3166 3313 0 266 282 122 58 chr20 58353342 58353498 -8314507 - L2 LINE L2 -494 2820 2655 512 242 17 0 chr20 58353671 58353791 -8314214 - MER20 DNA MER1_type -1 218 97 296 256 47 0 chr20 58353869 58353955 -8314050 - Charlie8 DNA MER1_type -2177 240 151 260 225 14 42 chr20 58355199 58355270 -8312735 - MER58A DNA MER1_type 0 224 156 * 351 263 11 11 chr20 58355254 58355349 -8312656 - MER81 DNA DNA -19 95 1 2653 52 0 0 chr20 58355365 58355673 -8312332 - AluY SINE Alu -3 308 1 710 170 6 94 chr20 58355683 58355776 -8312229 - MER58A DNA MER1_type -185 156 83 2455 79 0 0 chr20 58355776 58356080 -8311925 - AluY SINE Alu -7 304 1 710 170 6 94 chr20 58356080 58356157 -8311848 - MER58A DNA MER1_type -258 83 1 300 243 0 27 chr20 58356282 58356356 -8311649 + LTR16A1 LTR ERVL 61 132 -325 340 348 43 30 chr20 58356600 58356830 -8311175 + L2 LINE L2 3080 3312 -1 394 168 15 168 chr20 58357252 58357383 -8310622 + MER45A DNA AcHobo 65 175 -3 418 355 25 25 chr20 58357411 58357611 -8310394 - MIR SINE MIR -34 228 29 21 36 0 0 chr20 58358039 58358067 -8309938 + AT_rich Low_complexity Low_complexity 1 28 0 206 230 40 40 chr20 58358107 58358207 -8309798 + A-rich Low_complexity Low_complexity 5 104 0 1135 143 18 62 chr20 58358234 58358407 -8309598 + MLT1D LTR MaLR 1 163 -342 2038 140 3 7 chr20 58358407 58358707 -8309298 - AluSx SINE Alu -13 299 1 1135 143 18 62 chr20 58358707 58358757 -8309248 + MLT1D LTR MaLR 163 214 -291 234 36 0 0 chr20 58358775 58358803 -8309202 - MER58A DNA MER1_type -10 214 187 520 207 18 0 chr20 58358818 58358929 -8309076 - MER58A DNA MER1_type 0 113 1 1201 178 38 75 chr20 58358983 58359276 -8308729 + MLT1D LTR MaLR 223 504 -1 534 210 25 0 chr20 58359754 58359873 -8308132 - MER58A DNA MER1_type 0 122 1 2296 109 7 0 chr20 58360128 58360432 -8307573 + AluSx SINE Alu 1 306 -6 379 211 96 0 chr20 58360962 58361066 -8306939 + MIR SINE MIR 69 182 -80 349 185 25 0 chr20 58361078 58361159 -8306846 - MER53 DNA DNA -2 187 105 219 259 0 0 chr20 58361825 58361883 -8306122 + T-rich Low_complexity Low_complexity 4 61 0 579 269 64 51 chr20 58361911 58362223 -8305782 - HAL1 LINE L1 -5 2502 2187 1407 239 18 113 chr20 58362673 58362982 -8305023 - MER34 LTR ERV1 0 542 316 2363 88 10 3 chr20 58362982 58363287 -8304718 + AluSx SINE Alu 5 311 -1 1407 239 18 113 chr20 58363287 58363576 -8304429 - MER34 LTR ERV1 -226 316 1 2133 99 48 0 chr20 58363604 58363896 -8304109 + AluSx SINE Alu 6 311 -1 1455 104 0 30 chr20 58363906 58364108 -8303897 - AluSg/x SINE Alu -17 295 100 2083 116 4 0 chr20 58364123 58364391 -8303614 - AluSp SINE Alu -44 269 1 444 253 45 29 chr20 58364560 58364713 -8303292 - MIR SINE MIR -38 170 13 1879 202 49 39 chr20 58364747 58365129 -8302876 - MLT1D LTR MaLR -6 499 109 1986 118 65 0 chr20 58365129 58365408 -8302597 + AluSx SINE Alu 1 297 -15 1879 202 49 39 chr20 58365408 58365511 -8302494 - MLT1D LTR MaLR -396 109 9 361 364 45 19 chr20 58365905 58366059 -8301946 + MIR SINE MIR 91 248 -14 * 604 283 132 19 chr20 58366054 58366319 -8301686 + L2 LINE L2 2391 2685 -629 1593 144 0 81 chr20 58366322 58366670 -8301335 + MER33 DNA MER1_type 5 324 0 315 0 0 0 chr20 58367262 58367297 -8300708 + (TG)n Simple_repeat Simple_repeat 2 36 0 2094 94 3 35 chr20 58367375 58367663 -8300342 + AluSg SINE Alu 1 279 -31 26 50 0 0 chr20 58369388 58369428 -8298577 + GC_rich Low_complexity Low_complexity 1 40 0 24 32 0 0 chr20 58369791 58369822 -8298183 + GC_rich Low_complexity Low_complexity 1 31 0 200 167 93 37 chr20 58370334 58370388 -8297617 + L2 LINE L2 3257 3313 0 492 269 4 64 chr20 58370778 58371007 -8296998 - L1MC4a LINE L1 -307 5814 5644 348 292 192 27 chr20 58371661 58371880 -8296125 - L1MC4a LINE L1 -1690 6118 5864 331 298 61 17 chr20 58372027 58372208 -8295797 - L1MC4a LINE L1 -2199 5609 5421 2075 123 3 7 chr20 58372743 58373053 -8294952 - AluSx SINE Alu -3 309 1 729 158 38 49 chr20 58374474 58374658 -8293347 + MER53 DNA DNA 8 189 0 4390 123 6 2 chr20 58374925 58375557 -8292448 - MER41B LTR ERV1 0 635 1 359 274 82 15 chr20 58375611 58375746 -8292259 + MIR SINE MIR 65 208 -54 427 306 75 0 chr20 58375947 58376081 -8291924 + L2 LINE L2 2679 2822 -492 196 0 86 29 chr20 58376480 58376515 -8291490 + T-rich Low_complexity Low_complexity 2 38 0 438 74 0 0 chr20 58376517 58376571 -8291434 - AluJ/FRAM SINE Alu -30 282 229 1789 152 14 10 chr20 58376599 58376889 -8291116 + AluJb SINE Alu 1 291 -21 421 229 124 0 chr20 58377004 58377109 -8290896 - MIR SINE MIR -102 160 43 869 203 0 0 chr20 58377497 58377660 -8290345 - MER58B DNA MER1_type 0 341 179 2292 229 54 54 chr20 58377663 58378018 -8289987 + MER82 DNA MER2_type 1 358 -295 1930 159 7 16 chr20 58378018 58378327 -8289678 - AluJb SINE Alu -6 306 1 2292 229 54 54 chr20 58378327 58378618 -8289387 + MER82 DNA MER2_type 357 647 -6 901 193 12 0 chr20 58378625 58378796 -8289209 - MER58B DNA MER1_type -168 173 1 264 321 12 0 chr20 58379622 58379703 -8288302 - L2 LINE L2 0 3272 3191 1962 115 50 4 chr20 58379708 58379987 -8288018 + AluJb SINE Alu 1 292 -20 2082 119 3 7 chr20 58380472 58380804 -8287201 - AluSx SINE Alu 0 331 1 2360 78 10 7 chr20 58381259 58381567 -8286438 + AluY SINE Alu 1 309 -2 358 354 56 0 chr20 58381704 58381848 -8286157 + L1ME LINE L1 5486 5637 -484 2431 80 3 3 chr20 58381895 58382196 -8285809 + AluSp SINE Alu 1 301 -12 652 203 77 145 chr20 58382204 58382529 -8285476 + MER58B DNA MER1_type 39 341 0 234 150 0 0 chr20 58383280 58383320 -8284685 + (GGGA)n Simple_repeat Simple_repeat 3 42 0 1139 90 6 0 chr20 58383324 58383490 -8284515 + (GAAA)n Simple_repeat Simple_repeat 3 169 0 2234 107 27 0 chr20 58383491 58383790 -8284215 + AluSg SINE Alu 1 307 -3 903 133 11 22 chr20 58383795 58383975 -8284030 + GA-rich Low_complexity Low_complexity 3 180 0 1072 213 5 27 chr20 58384465 58384686 -8283319 - MER20 DNA MER1_type -1 218 3 864 106 0 0 chr20 58385298 58385411 -8282594 - AluSp SINE Alu -198 115 3 387 0 0 0 chr20 58385613 58385656 -8282349 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 473 286 71 36 chr20 58386218 58386470 -8281535 + MIR SINE MIR 1 261 -1 259 318 30 73 chr20 58386568 58386654 -8281351 + L1MC/D LINE L1 5311 5399 -2409 1847 138 0 47 chr20 58386654 58386974 -8281031 + AluJb SINE Alu 1 306 0 259 318 30 73 chr20 58386974 58387119 -8280886 + L1MC/D LINE L1 5399 5533 -2275 2005 91 60 4 chr20 58387230 58387495 -8280510 + AluSg SINE Alu 1 280 -30 486 329 75 8 chr20 58387668 58387908 -8280097 - MIR SINE MIR 0 262 7 440 273 119 22 chr20 58388010 58388237 -8279768 + L2 LINE L2 3065 3313 0 192 77 0 0 chr20 58388805 58388831 -8279174 + (A)n Simple_repeat Simple_repeat 1 26 0 288 210 100 50 chr20 58389584 58389684 -8278321 + MIR SINE MIR 50 154 -108 1036 118 0 0 chr20 58389734 58389870 -8278135 + AluSc SINE Alu 1 136 -173 2381 98 10 0 chr20 58389871 58390176 -8277829 + AluSx SINE Alu 1 308 -4 286 289 66 112 chr20 58390176 58390674 -8277331 - MLT1K LTR MaLR -67 521 47 716 322 92 49 chr20 58390690 58391258 -8276747 - L2 LINE L2 -8 3305 2763 1191 293 120 9 chr20 58391258 58391715 -8276290 + MLT1J LTR MaLR 1 508 -3 716 322 92 49 chr20 58391715 58391913 -8276092 - L2 LINE L2 -550 2763 2466 2078 94 0 4 chr20 58391913 58392188 -8275817 + AluY SINE Alu 38 311 0 716 322 92 49 chr20 58392188 58392213 -8275792 - L2 LINE L2 -847 2466 2444 384 224 133 10 chr20 58392358 58392456 -8275549 - L2 LINE L2 0 3313 3204 236 337 0 0 chr20 58392560 58392651 -8275354 + MIR SINE MIR 84 143 -65 979 269 95 0 chr20 58392667 58392950 -8275055 + MLT1A1 LTR MaLR 2 311 -54 2169 103 0 55 chr20 58392982 58393312 -8274693 - AluSx SINE Alu 0 312 1 381 136 15 0 chr20 58393312 58393378 -8274627 + MLT1A1 LTR MaLR 326 392 -4 337 121 0 17 chr20 58393646 58393704 -8274301 + MLT1K LTR MaLR 189 245 -343 357 271 146 21 chr20 58394460 58394604 -8273401 - MIR SINE MIR -6 256 95 839 191 0 48 chr20 58394737 58394905 -8273100 + AluJb SINE Alu 121 280 -32 1110 56 17 22 chr20 58394907 58395086 -8272919 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 307 104 45 9 chr20 58395086 58395197 -8272808 + GA-rich Low_complexity Low_complexity 1 115 0 1789 139 36 46 chr20 58395935 58396238 -8271767 - AluJb SINE Alu -12 300 1 813 191 71 6 chr20 58396290 58396473 -8271532 + MLT1D LTR MaLR 303 497 -8 1789 154 13 34 chr20 58397807 58398105 -8269900 + AluJo SINE Alu 1 292 -20 2255 125 0 6 chr20 58398112 58398423 -8269582 + AluSc SINE Alu 1 309 0 423 287 27 63 chr20 58399554 58399777 -8268228 - MIR SINE MIR -35 227 13 562 115 0 0 chr20 58399990 58400068 -8267937 - AluS SINE Alu -13 299 222 248 61 0 0 chr20 58400068 58400101 -8267904 - Alu SINE Alu -275 33 1 1351 188 34 62 chr20 58400435 58400524 -8267481 - Charlie5 DNA MER1_type -7 2617 2527 473 162 20 0 chr20 58400524 58400623 -8267382 - L1MB2 LINE L1 -3 6168 6068 1351 188 34 62 chr20 58400623 58400921 -8267084 - Charlie5 DNA MER1_type -97 2527 2241 452 209 0 115 chr20 58400927 58400962 -8267043 - MER3 DNA MER1_type 6 168 131 2358 89 0 0 chr20 58400962 58401273 -8266732 + AluSq SINE Alu 1 313 0 452 209 0 115 chr20 58401273 58401376 -8266629 - MER3 DNA MER1_type -31 131 46 2078 138 10 0 chr20 58402746 58403037 -8264968 + AluSx SINE Alu 2 295 -17 456 230 26 9 chr20 58403103 58403216 -8264789 - MIR SINE MIR -60 202 88 221 136 0 23 chr20 58403271 58403315 -8264690 + (TTCC)n Simple_repeat Simple_repeat 2 44 0 190 340 0 0 chr20 58403495 58403548 -8264457 - L2 LINE L2 -4 3268 3216 1035 217 14 0 chr20 58403558 58403770 -8264235 - MER20 DNA MER1_type -4 215 1 526 292 79 40 chr20 58403853 58404182 -8263823 - L1MC4a LINE L1 -329 5792 5491 2045 120 40 3 chr20 58404808 58405107 -8262898 + AluSx SINE Alu 1 310 -2 1424 186 107 0 chr20 58405449 58405712 -8262293 + AluJo SINE Alu 3 293 -19 1231 296 10 13 chr20 58405808 58406203 -8261802 - L1MC4a LINE L1 -1875 5933 5540 1875 225 18 20 chr20 58406750 58407262 -8260743 + MLT1F LTR MaLR 15 542 0 188 269 128 0 chr20 58407474 58407552 -8260453 + MIR SINE MIR 65 152 -110 419 336 31 0 chr20 58407650 58407778 -8260227 - L2 LINE L2 0 3272 3141 269 295 98 88 chr20 58408103 58408408 -8259597 + L2 LINE L2 2900 3207 -106 925 132 0 56 chr20 58408431 58408575 -8259430 - AluSq/x SINE Alu -177 136 1 231 270 184 10 chr20 58408575 58408704 -8259301 + MIR3 SINE MIR 20 170 -38 1557 134 94 7 chr20 58408732 58409030 -8258975 - MER33 DNA MER1_type 0 324 1 2217 123 3 3 chr20 58409443 58409751 -8258254 - AluSx SINE Alu -4 308 1 528 269 109 94 chr20 58410199 58410668 -8257337 + MLT1K LTR MaLR 1 476 0 286 366 52 33 chr20 58410690 58410843 -8257162 - MIR3 SINE MIR -49 159 4 1496 224 91 36 chr20 58410851 58411325 -8256680 - MLT1D LTR MaLR 0 505 6 492 211 78 66 chr20 58411703 58411869 -8256136 + MIR SINE MIR 35 202 -60 200 280 65 28 chr20 58412681 58412788 -8255217 - MIR SINE MIR -34 228 118 275 157 79 11 chr20 58412932 58413021 -8254984 - L1ME4a LINE L1 0 6121 6027 2378 82 3 3 chr20 58413105 58413408 -8254597 - AluSp SINE Alu -10 303 1 341 253 117 51 chr20 58413453 58413570 -8254435 - L1ME LINE L1 -368 5753 5645 1958 133 29 29 chr20 58413570 58413878 -8254127 - AluJo SINE Alu -4 308 1 341 253 117 51 chr20 58413878 58414033 -8253972 - L1ME LINE L1 -476 5645 5463 2135 125 3 10 chr20 58414343 58414648 -8253357 - AluJb SINE Alu -9 303 1 185 246 115 16 chr20 58414793 58414854 -8253151 + MIR SINE MIR 159 225 -37 336 243 0 54 chr20 58415145 58415256 -8252749 - L2 LINE L2 -21 3292 3188 192 329 57 14 chr20 58416372 58416442 -8251563 - MIR SINE MIR -162 100 28 1936 145 33 0 chr20 58416451 58416758 -8251247 - AluSx SINE Alu 0 316 1 180 186 0 47 chr20 58417250 58417293 -8250712 + MIR SINE MIR 83 123 -139 219 312 140 5 chr20 58418152 58418345 -8249660 - MIR SINE MIR -48 214 5 2299 112 0 0 chr20 58419578 58419881 -8248124 - AluSc SINE Alu -6 303 1 238 301 0 60 chr20 58419951 58420134 -8247871 + GA-rich Low_complexity Low_complexity 1 172 0 252 286 5 49 chr20 58420194 58420379 -8247626 + GA-rich Low_complexity Low_complexity 1 177 0 368 271 71 14 chr20 58420552 58420692 -8247313 + L2 LINE L2 3122 3269 -3 247 319 60 17 chr20 58421135 58421251 -8246754 - L2 LINE L2 -15 3257 3137 200 192 19 19 chr20 58421376 58421428 -8246577 - L2 LINE L2 -339 2974 2923 189 200 0 44 chr20 58422356 58422401 -8245604 - MIR SINE MIR -117 145 103 1493 141 39 56 chr20 58422923 58423207 -8244798 + AluJo SINE Alu 1 279 -33 321 303 111 59 chr20 58423247 58423729 -8244276 - L2 LINE L2 -9 3263 2706 2325 107 0 0 chr20 58423733 58424042 -8243963 - AluY SINE Alu -2 309 1 493 222 56 0 chr20 58424066 58424192 -8243813 - MER58B DNA MER1_type -5 336 204 601 193 61 0 chr20 58424324 58424438 -8243567 + MER46A DNA MER2_type 1 121 -115 240 35 0 0 chr20 58424438 58424467 -8243538 + (TG)n Simple_repeat Simple_repeat 2 30 0 731 194 30 22 chr20 58424468 58424602 -8243403 - AluJo SINE Alu -176 136 2 539 219 8 8 chr20 58424604 58424732 -8243273 + MER46A DNA MER2_type 109 236 0 740 271 152 15 chr20 58424736 58425079 -8242926 - L2 LINE L2 -36 3277 2888 2217 126 10 0 chr20 58425818 58426127 -8241878 - AluSx SINE Alu 0 312 1 713 223 119 11 chr20 58426127 58426387 -8241618 + LTR37A LTR ERV1 139 426 0 528 249 78 57 chr20 58426387 58426580 -8241425 - MIR SINE MIR -59 203 7 1916 136 4 4 chr20 58426900 58427180 -8240825 + AluJb SINE Alu 14 293 -19 594 315 51 0 chr20 58427546 58427743 -8240262 - MIR SINE MIR -6 256 50 2046 210 73 20 chr20 58427914 58428423 -8239582 + MLT1F LTR MaLR 5 540 -2 781 303 23 24 chr20 58428427 58428915 -8239090 + MLT1F-int LTR MaLR 4 611 -760 262 341 16 16 chr20 58429094 58429217 -8238788 + MLT1F-int LTR MaLR 756 878 -493 1811 256 96 20 chr20 58430749 58431406 -8236599 + L1ME3A LINE L1 5430 6136 -34 763 300 32 32 chr20 58431418 58431828 -8236177 - L1MC4a LINE L1 -1954 5854 5445 21 36 0 0 chr20 58431828 58431856 -8236149 + AT_rich Low_complexity Low_complexity 1 28 0 324 300 63 32 chr20 58432057 58432243 -8235762 + MIR SINE MIR 32 226 -36 2072 130 0 7 chr20 58433167 58433468 -8234537 + AluSx SINE Alu 1 299 -13 456 317 33 34 chr20 58433844 58434056 -8233949 - MIR SINE MIR -28 234 28 1042 164 26 78 chr20 58434056 58434287 -8233718 - MER20 DNA MER1_type 0 219 1 456 317 33 34 chr20 58434287 58434311 -8233694 - MIR SINE MIR -234 28 5 342 162 10 121 chr20 58434645 58434744 -8233261 + Charlie8 DNA MER1_type 85 172 -2245 185 292 92 62 chr20 58434987 58435117 -8232888 - L2 LINE L2 -186 3086 2953 233 290 14 14 chr20 58435231 58435300 -8232705 + MIR SINE MIR 111 179 -83 2021 113 40 0 chr20 58436166 58436474 -8231531 - AluSq SINE Alu 0 321 3 2401 98 0 0 chr20 58436513 58436820 -8231185 - AluSq SINE Alu -6 307 1 2306 73 0 18 chr20 58436885 58437194 -8230811 + AluY SINE Alu 1 304 0 1868 226 81 17 chr20 58437360 58437843 -8230162 - LTR40a LTR ERVL -5 514 1 576 249 69 41 chr20 58437921 58438127 -8229878 - MIR SINE MIR -24 238 19 620 271 130 6 chr20 58438716 58438893 -8229112 + MIR SINE MIR 3 201 -61 440 205 118 31 chr20 58438901 58439028 -8228977 - L2 LINE L2 0 3313 3176 394 276 100 13 chr20 58440409 58440648 -8227357 + MIR SINE MIR 3 262 0 977 186 46 42 chr20 58440708 58440945 -8227060 - MIR SINE MIR 0 262 25 194 337 12 24 chr20 58441320 58441403 -8226602 - L2 LINE L2 -508 2806 2725 256 115 26 90 chr20 58441421 58441435 -8226570 + L1PB2 LINE L1 6077 6090 -61 1826 168 0 16 chr20 58441435 58441744 -8226261 + AluJo SINE Alu 1 304 -8 256 115 26 90 chr20 58441744 58441807 -8226198 + L1PB2 LINE L1 6090 6149 -2 701 176 131 35 chr20 58442187 58442386 -8225619 + MER20 DNA MER1_type 1 218 -1 815 284 79 53 chr20 58442435 58442890 -8225115 - LTR67 LTR ERVL -55 502 36 294 285 69 8 chr20 58443024 58443154 -8224851 - MER113 DNA MER1_type? -190 331 194 * 341 301 26 28 chr20 58443117 58443349 -8224656 - MER106B DNA MER1_type -11 1048 1 391 333 29 29 chr20 58443367 58443541 -8224464 + MER5A DNA MER1_type 10 183 -6 1578 187 3 3 chr20 58443552 58443835 -8224170 + AluJo SINE Alu 1 283 -29 271 250 42 42 chr20 58443838 58443934 -8224071 - MER5B DNA MER1_type -2 176 81 254 309 81 8 chr20 58443965 58444088 -8223917 + MIR SINE MIR 14 145 -117 456 230 23 0 chr20 58444250 58444337 -8223668 - MER5A DNA MER1_type -83 106 18 1091 193 24 5 chr20 58444352 58444565 -8223440 - MER20 DNA MER1_type 0 219 3 647 300 89 13 chr20 58445352 58445589 -8222416 - MIR SINE MIR 0 262 8 328 225 56 0 chr20 58445637 58445726 -8222279 + MER5A DNA MER1_type 22 115 -74 1908 141 0 42 chr20 58445892 58446204 -8221801 + AluJo SINE Alu 1 299 -13 204 350 0 0 chr20 58446866 58446926 -8221079 + MIR SINE MIR 93 152 -56 937 271 89 32 chr20 58447781 58448133 -8219872 + L2 LINE L2 2706 3098 -215 2251 100 7 23 chr20 58448133 58448432 -8219573 + AluSq SINE Alu 1 294 -19 937 271 89 32 chr20 58448432 58448661 -8219344 + L2 LINE L2 3098 3313 0 271 309 55 0 chr20 58448870 58448980 -8219025 + L2 LINE L2 3185 3300 -13 202 338 40 0 chr20 58448994 58449068 -8218937 - MIR SINE MIR -65 197 121 808 278 15 39 chr20 58449691 58450022 -8217983 - MLT2C1 LTR ERVL 0 397 75 411 260 138 45 chr20 58450042 58450200 -8217805 + L2 LINE L2 2991 3182 -131 2111 81 26 4 chr20 58450200 58450501 -8217504 - AluSc SINE Alu 0 307 1 411 260 138 45 chr20 58450501 58450587 -8217418 + L2 LINE L2 3182 3259 -54 1174 179 0 45 chr20 58450594 58450817 -8217188 + AluJb SINE Alu 86 298 -14 1819 129 107 4 chr20 58451603 58451883 -8216122 + AluSx SINE Alu 1 309 -3 417 289 11 83 chr20 58452798 58452930 -8215075 + MIR SINE MIR 15 132 -130 2486 66 26 7 chr20 58452930 58453234 -8214771 - AluSg SINE Alu 0 310 1 417 289 11 83 chr20 58453234 58453281 -8214724 + MIR SINE MIR 132 181 -81 264 260 41 48 chr20 58453949 58454095 -8213910 + L2 LINE L2 2662 2806 -508 462 305 115 15 chr20 58454402 58454602 -8213403 + MIR SINE MIR 35 254 -8 396 202 3 46 chr20 58454621 58454777 -8213228 - L1ME4a LINE L1 -3 6072 1195 1773 262 14 12 chr20 58454847 58455339 -8212666 - L1MB7 LINE L1 -13 6171 5679 264 59 0 0 chr20 58456001 58456035 -8211970 + (TG)n Simple_repeat Simple_repeat 2 35 0 2309 99 0 29 chr20 58456087 58456400 -8211605 + AluSx SINE Alu 1 304 -8 1563 189 122 6 chr20 58456404 58456716 -8211289 - MER7A DNA MER2_type 0 346 1 621 237 62 6 chr20 58456966 58457143 -8210862 - MIR SINE MIR -72 190 4 662 34 23 0 chr20 58458533 58458621 -8209384 + (TCTA)n Simple_repeat Simple_repeat 4 93 0 1999 146 3 0 chr20 58458622 58458909 -8209096 - AluJb SINE Alu -24 288 1 509 228 87 63 chr20 58459128 58459334 -8208671 - MIR SINE MIR -21 241 31 484 278 63 0 chr20 58459401 58459527 -8208478 - L2 LINE L2 -5 3267 3134 1349 242 86 12 chr20 58459540 58459970 -8208035 + MLT1C LTR MaLR 6 467 0 2409 97 3 0 chr20 58460160 58460545 -8207460 - AluSx SINE Alu 0 386 1 33 66 0 0 chr20 58460609 58460670 -8207335 + AT_rich Low_complexity Low_complexity 1 61 0 1172 173 26 0 chr20 58460670 58460898 -8207107 - MER33 DNA MER1_type -259 65 1 1657 194 11 0 chr20 58460951 58461235 -8206770 + AluJo SINE Alu 1 287 -25 323 224 0 0 chr20 58461236 58461303 -8206702 - MIR SINE MIR -1 261 195 458 235 64 148 chr20 58461974 58462159 -8205846 + L2 LINE L2 2988 3138 -134 1548 205 36 27 chr20 58462159 58462495 -8205510 - MER58B DNA MER1_type 0 341 3 458 235 64 148 chr20 58462495 58462620 -8205385 + L2 LINE L2 3138 3272 0 715 181 12 82 chr20 58463286 58463389 -8204616 - MER20 DNA MER1_type -45 174 86 2287 100 0 7 chr20 58463389 58463690 -8204315 - AluSx SINE Alu -13 299 1 715 181 12 82 chr20 58463690 58463757 -8204248 - MER20 DNA MER1_type -133 86 16 426 196 0 59 chr20 58464177 58464279 -8203726 + MIR SINE MIR 116 211 -51 210 37 0 0 chr20 58465312 58465339 -8202666 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 333 326 155 12 chr20 58465339 58465584 -8202421 - L2 LINE L2 -13 3300 3021 465 284 32 32 chr20 58466037 58466227 -8201778 - MIR SINE MIR -52 210 21 805 233 60 19 chr20 58467182 58467397 -8200608 - MER58A DNA MER1_type 0 224 1 1523 209 73 38 chr20 58467582 58468031 -8199974 + MLT1C LTR MaLR 1 465 -2 299 165 72 41 chr20 58468898 58468995 -8199010 - LTR67 LTR ERVL -9 548 449 2220 103 30 0 chr20 58470520 58470821 -8197184 - AluY SINE Alu -1 310 1 307 325 31 38 chr20 58470932 58471060 -8196945 + L1ME4a LINE L1 5952 6080 -41 833 245 10 5 chr20 58471060 58471268 -8196737 - MER3 DNA MER1_type 0 209 1 307 325 31 38 chr20 58471268 58471299 -8196706 + L1ME4a LINE L1 6080 6110 -11 637 261 80 16 chr20 58471585 58471834 -8196171 - MLT1L LTR MaLR -349 266 2 216 200 0 0 chr20 58472757 58472802 -8195203 + (TCCA)n Simple_repeat Simple_repeat 1 45 0 281 286 14 0 chr20 58472964 58473034 -8194971 - L2 LINE L2 -2 3270 3200 276 30 0 0 chr20 58473191 58473224 -8194781 + (GA)n Simple_repeat Simple_repeat 2 34 0 377 342 65 15 chr20 58473634 58473894 -8194111 - L2 LINE L2 -337 2977 2705 610 102 0 163 chr20 58474405 58474552 -8193453 - MLT1C LTR MaLR -344 123 1 2952 165 47 11 chr20 58474604 58475131 -8192874 - MER44D DNA MER2_type -2 603 3 227 308 192 8 chr20 58475138 58475258 -8192747 - MIR SINE MIR -70 192 51 * 513 244 19 45 chr20 58475255 58475411 -8192594 + MIR SINE MIR 107 258 -4 351 244 0 12 chr20 58475530 58475616 -8192389 + Charlie8 DNA MER1_type 83 167 -2250 1126 76 0 27 chr20 58475961 58476146 -8191859 + (TG)n Simple_repeat Simple_repeat 1 180 0 1066 88 6 22 chr20 58476174 58476356 -8191649 + (TG)n Simple_repeat Simple_repeat 2 180 0 209 371 29 0 chr20 58476597 58476702 -8191303 - MIR3 SINE MIR -6 202 95 302 327 88 9 chr20 58476832 58476945 -8191060 + MIR SINE MIR 31 152 -110 342 188 16 16 chr20 58477089 58477153 -8190852 - L2 LINE L2 -9 3263 3200 918 183 8 81 chr20 58477301 58477536 -8190469 + MER20 DNA MER1_type 2 219 0 204 250 167 31 chr20 58478267 58478363 -8189642 - L2 LINE L2 -2 3270 3162 1553 221 79 84 chr20 58478472 58479032 -8188973 + MLT1E LTR MaLR 1 557 -36 301 264 28 0 chr20 58479041 58479113 -8188892 + L2 LINE L2 3199 3272 0 218 385 62 0 chr20 58479121 58479217 -8188788 - L2 LINE L2 -38 3234 3133 512 316 70 14 chr20 58479513 58479728 -8188277 + MIR SINE MIR 23 249 -13 239 345 45 9 chr20 58479812 58479922 -8188083 - HAL1 LINE L1 -2393 114 1 695 338 98 49 chr20 58479938 58480757 -8187248 + L2 LINE L2 2040 2898 -416 274 281 87 111 chr20 58480784 58480943 -8187062 + L2 LINE L2 2977 3129 -143 5569 57 15 16 chr20 58480943 58481669 -8186336 - L1PA6 LINE L1 -1 6153 5429 274 281 87 111 chr20 58481669 58481762 -8186243 + L2 LINE L2 3129 3223 -49 938 202 43 14 chr20 58482212 58482420 -8185585 - MER20 DNA MER1_type -3 216 3 418 269 173 6 chr20 58482452 58482608 -8185397 - L2 LINE L2 0 3313 3132 253 269 183 0 chr20 58482635 58482728 -8185277 + L2 LINE L2 3161 3270 -2 381 286 57 34 chr20 58482758 58482933 -8185072 - L2 LINE L2 -231 3082 2904 290 290 116 79 chr20 58482945 58483248 -8184757 + L2 LINE L2 2959 3272 0 999 96 27 9 chr20 58483253 58483585 -8184420 + (TGGA)n Simple_repeat Simple_repeat 4 339 0 459 0 0 0 chr20 58483884 58483935 -8184070 + (TG)n Simple_repeat Simple_repeat 2 52 0 332 297 66 28 chr20 58484192 58484367 -8183638 + MIR SINE MIR 17 195 -65 964 167 16 27 chr20 58484548 58484734 -8183271 + MER5A DNA MER1_type 6 189 0 191 370 54 0 chr20 58484734 58484826 -8183179 - L2 LINE L2 -547 2767 2671 394 143 24 12 chr20 58484880 58484964 -8183041 - MER53 DNA DNA 0 189 105 420 312 0 43 chr20 58485684 58485825 -8182180 + MIR SINE MIR 58 192 -70 271 323 47 25 chr20 58486687 58486922 -8181083 - L1ME LINE L1 -242 5879 5640 568 276 77 6 chr20 58487730 58487900 -8180105 + MIR SINE MIR 53 234 -28 356 246 82 25 chr20 58487902 58488024 -8179981 + L2 LINE L2 3176 3304 -9 368 254 9 53 chr20 58488214 58488328 -8179677 - L2 LINE L2 -1 3312 3204 193 239 0 104 chr20 58488403 58488470 -8179535 - L2 LINE L2 0 3272 3213 21 36 0 0 chr20 58488878 58488906 -8179099 + AT_rich Low_complexity Low_complexity 1 28 0 647 217 67 50 chr20 58489597 58489673 -8178332 + MER5A DNA MER1_type 1 74 -115 2405 8 0 0 chr20 58489673 58489939 -8178066 + L1PA3 LINE L1 5890 6155 0 647 217 67 50 chr20 58489939 58490042 -8177963 + MER5A DNA MER1_type 74 183 -6 189 274 14 55 chr20 58489988 58490061 -8177944 - MER5A DNA MER1_type -118 71 2 * 342 186 116 86 chr20 58490146 58490263 -8177742 + MER5A DNA MER1_type 12 145 -44 353 100 0 17 chr20 58490295 58490355 -8177650 + (TTTC)n Simple_repeat Simple_repeat 2 60 0 1893 155 0 52 chr20 58490358 58490687 -8177318 - AluJb SINE Alu 0 312 1 330 200 31 0 chr20 58490688 58490753 -8177252 - MER5A DNA MER1_type -114 75 9 448 256 27 22 chr20 58490858 58491022 -8176983 + MIR SINE MIR 33 192 -63 960 265 110 47 chr20 58491829 58492275 -8175730 - L2 LINE L2 -10 3303 2830 783 204 50 11 chr20 58492294 58492475 -8175530 + MER20 DNA MER1_type 32 219 0 430 301 87 5 chr20 58492498 58492717 -8175288 - L2 LINE L2 -513 2801 2565 553 198 86 43 chr20 58493932 58494094 -8173911 + MER53 DNA DNA 15 183 -6 456 271 8 8 chr20 58494254 58494376 -8173629 + MIR SINE MIR 34 155 -107 1105 214 17 17 chr20 58494381 58494615 -8173390 + Tigger7 DNA MER2_type 1 234 -499 563 157 49 10 chr20 58494616 58494718 -8173287 + Tigger7 DNA MER2_type 2386 2491 0 265 266 32 43 chr20 58494722 58494816 -8173189 + MIR SINE MIR 164 256 -6 890 202 29 6 chr20 58494932 58495105 -8172900 + FRAM SINE Alu 1 174 -2 1293 189 16 101 chr20 58495472 58495902 -8172103 - Tigger3(Golem) DNA MER2_type -1 3028 1 817 192 42 36 chr20 58496307 58496500 -8171505 - MER3 DNA MER1_type -5 204 11 392 184 6 35 chr20 58496843 58497017 -8170988 + (TA)n Simple_repeat Simple_repeat 1 169 0 736 262 44 62 chr20 58497170 58497445 -8170560 - MLT1J LTR MaLR -7 504 235 208 244 0 0 chr20 58497589 58497630 -8170375 + GA-rich Low_complexity Low_complexity 1 41 0 394 271 83 44 chr20 58497778 58497898 -8170107 - Charlie8 DNA MER1_type -2140 277 163 204 67 0 0 chr20 58497898 58497928 -8170077 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 394 271 83 44 chr20 58497928 58498036 -8169969 - Charlie8 DNA MER1_type -2254 163 40 349 130 0 0 chr20 58498935 58498989 -8169016 + MER81 DNA DNA 5 58 -56 1027 58 0 0 chr20 58498991 58499111 -8168894 - AluSg/x SINE Alu -11 301 182 261 303 24 36 chr20 58499768 58499933 -8168072 + L1ME4a LINE L1 5863 6025 -96 180 0 0 0 chr20 58500478 58500498 -8167507 + (T)n Simple_repeat Simple_repeat 1 20 0 223 319 109 14 chr20 58500529 58500667 -8167338 - MIR SINE MIR -71 191 41 244 111 0 0 chr20 58500905 58500941 -8167064 - Tigger1 DNA MER2_type -1064 1354 1319 14099 133 24 22 chr20 58501050 58501239 -8166766 - Tigger1 DNA MER2_type -1 2417 2230 1855 153 29 19 chr20 58501239 58501547 -8166458 - AluSx SINE Alu -1 311 1 14099 133 24 22 chr20 58501547 58501946 -8166059 - Tigger1 DNA MER2_type -188 2230 1833 2077 131 3 23 chr20 58501946 58502252 -8165753 - AluSx SINE Alu -12 300 1 14099 133 24 22 chr20 58502252 58503629 -8164376 - Tigger1 DNA MER2_type -585 1833 444 1708 153 0 35 chr20 58503629 58503911 -8164094 + AluJo SINE Alu 36 307 -5 14099 133 24 22 chr20 58503911 58504356 -8163649 - Tigger1 DNA MER2_type -1974 444 1 567 178 0 0 chr20 58504508 58504636 -8163369 - AluSg/x SINE Alu 0 321 194 486 244 24 16 chr20 58505319 58505446 -8162559 + MER5B DNA MER1_type 48 175 -3 710 188 156 0 chr20 58506076 58506230 -8161775 + MER45A DNA AcHobo 1 178 0 2496 167 121 35 chr20 58506472 58507190 -8160815 - LTR1B LTR ERV1 0 785 1 232 303 96 50 chr20 58507478 58507548 -8160457 - L2 LINE L2 -664 2650 2585 962 206 23 5 chr20 58507548 58507762 -8160243 - MER20 DNA MER1_type -1 218 1 232 303 96 50 chr20 58507762 58507909 -8160096 - L2 LINE L2 -729 2585 2423 384 179 13 0 chr20 58508119 58508197 -8159808 - MER53 DNA DNA 0 189 111 324 130 101 0 chr20 58508273 58508342 -8159663 + MER53 DNA DNA 93 168 -21 269 123 18 35 chr20 58508297 58508354 -8159651 - MER53 DNA DNA -112 77 22 * 1505 214 4 7 chr20 58508389 58508670 -8159335 - AluJb SINE Alu -32 280 1 1242 268 99 25 chr20 58508730 58509245 -8158760 + MLT1L LTR MaLR 62 614 -1 1087 209 79 4 chr20 58509436 58509690 -8158315 + LTR40a LTR ERVL 3 275 -244 355 113 28 0 chr20 58510095 58510166 -8157839 + GA-rich Low_complexity Low_complexity 2 74 0 2143 174 61 0 chr20 58511076 58511468 -8156537 + MSTA LTR MaLR 1 416 -12 266 243 27 0 chr20 58511548 58511622 -8156383 + MIR SINE MIR 77 152 -110 1635 221 129 11 chr20 58511623 58511664 -8156341 - MLT2B1 LTR ERVL 0 520 485 246 62 0 0 chr20 58511664 58511696 -8156309 + (TA)n Simple_repeat Simple_repeat 2 33 0 1635 221 129 11 chr20 58511696 58512111 -8155894 - MLT2B1 LTR ERVL -35 485 10 301 196 134 21 chr20 58512627 58512724 -8155281 - LTR67 LTR ERVL -10 547 440 202 190 155 0 chr20 58513268 58513326 -8154679 - L2 LINE L2 -188 3084 3018 220 234 0 0 chr20 58515668 58515715 -8152290 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 307 214 22 0 chr20 58515806 58515895 -8152110 + CT-rich Low_complexity Low_complexity 1 91 0 484 272 57 19 chr20 58515917 58516075 -8151930 - MIR SINE MIR -55 207 44 367 247 0 0 chr20 58516184 58516269 -8151736 + MER5A DNA MER1_type 25 109 -80 239 250 28 0 chr20 58517053 58517125 -8150880 + MIR SINE MIR 72 145 -117 478 321 95 40 chr20 58517196 58517523 -8150482 + L1ME3 LINE L1 5811 6155 -7 244 240 0 0 chr20 58517715 58517765 -8150240 + MIR SINE MIR 184 233 -29 293 241 115 0 chr20 58517785 58517872 -8150133 - MIR SINE MIR -71 191 95 1570 223 82 7 chr20 58517872 58518299 -8149706 - MLT1C LTR MaLR -3 464 6 1248 223 13 20 chr20 58519077 58519377 -8148628 + MLT1C LTR MaLR 59 356 -111 457 229 187 14 chr20 58519426 58519640 -8148365 - L2 LINE L2 -1025 2289 2039 258 250 0 17 chr20 58519914 58519974 -8148031 + MLT1K LTR MaLR 201 259 -329 593 327 67 17 chr20 58521158 58521642 -8146363 - L2 LINE L2 -80 3233 2720 8111 199 30 13 chr20 58521694 58523779 -8144226 - L1M3 LINE L1 -658 5513 3394 220 292 29 66 chr20 58523842 58523979 -8144026 - MER5B DNA MER1_type -20 158 27 608 225 8 8 chr20 58524625 58524754 -8143251 + L2 LINE L2 3138 3266 -6 282 287 35 0 chr20 58524874 58524961 -8143044 + MIR SINE MIR 103 192 -70 287 261 217 50 chr20 58525411 58525572 -8142433 + L2 LINE L2 2891 3078 -194 238 292 71 18 chr20 58525677 58525790 -8142215 + MIR SINE MIR 27 145 -117 198 316 0 0 chr20 58526630 58526687 -8141318 - L2 LINE L2 -54 3218 3162 209 284 113 0 chr20 58526885 58527079 -8140926 - L2 LINE L2 -359 2955 2740 333 323 0 15 chr20 58527180 58527313 -8140692 + (TG)n Simple_repeat Simple_repeat 2 132 0 849 246 0 0 chr20 58527330 58527672 -8140333 + (TG)n Simple_repeat Simple_repeat 1 342 0 549 337 76 3 chr20 58527726 58528017 -8139988 - L1MC4 LINE L1 -184 7858 7547 939 184 215 36 chr20 58528128 58528486 -8139519 + MLT1D LTR MaLR 12 433 -72 25 31 0 0 chr20 58529570 58529602 -8138403 + AT_rich Low_complexity Low_complexity 1 32 0 563 301 104 6 chr20 58530026 58530412 -8137593 - MLT1L LTR MaLR -10 605 151 782 228 34 15 chr20 58530762 58530968 -8137037 + MER20 DNA MER1_type 5 214 -5 228 267 100 0 chr20 58531226 58531316 -8136689 + L2 LINE L2 2966 3064 -208 22 70 0 0 chr20 58531626 58531669 -8136336 + AT_rich Low_complexity Low_complexity 1 43 0 600 307 134 22 chr20 58531823 58532238 -8135767 - MLT1L LTR MaLR -6 609 148 246 167 56 0 chr20 58532238 58532292 -8135713 + MER58B DNA MER1_type 1 57 -284 421 224 250 0 chr20 58532292 58532408 -8135597 + MER58B DNA MER1_type 194 338 -3 407 294 66 12 chr20 58532500 58532671 -8135334 + MIR SINE MIR 34 219 -43 21 36 0 0 chr20 58533163 58533191 -8134814 + AT_rich Low_complexity Low_complexity 1 28 0 630 251 34 76 chr20 58533251 58533514 -8134491 + MIR SINE MIR 10 261 -1 387 257 57 0 chr20 58533537 58533642 -8134363 - MIR SINE MIR -88 174 64 1965 189 45 42 chr20 58534359 58534830 -8133175 + MLT1D LTR MaLR 34 505 0 243 238 17 0 chr20 58534919 58535091 -8132914 + (CA)n Simple_repeat Simple_repeat 1 175 0 273 273 20 0 chr20 58535093 58535192 -8132813 + (CCCA)n Simple_repeat Simple_repeat 2 102 0 414 198 19 0 chr20 58535194 58535356 -8132649 + (CA)n Simple_repeat Simple_repeat 1 165 0 237 98 0 0 chr20 58535751 58535792 -8132213 + (TTCA)n Simple_repeat Simple_repeat 2 42 0 246 247 43 75 chr20 58535798 58535891 -8132114 - L2 LINE L2 -10 3262 3173 423 311 0 0 chr20 58536504 58536671 -8131334 + (CA)n Simple_repeat Simple_repeat 1 167 0 602 264 67 21 chr20 58537573 58537766 -8130239 - MIR SINE MIR -29 233 32 181 206 95 48 chr20 58538976 58539039 -8128966 - L2 LINE L2 0 3313 3248 438 282 141 29 chr20 58539096 58539168 -8128837 + MIR SINE MIR 10 73 -189 973 267 51 31 chr20 58539168 58539557 -8128448 + MLT2C1 LTR ERVL 1 397 0 438 282 141 29 chr20 58539557 58539690 -8128315 + MIR SINE MIR 73 238 -24 * 481 320 76 0 chr20 58539671 58539843 -8128162 + L2 LINE L2 2897 3081 -191 2325 125 0 0 chr20 58540051 58540363 -8127642 - AluSq SINE Alu -1 312 1 422 286 43 1 chr20 58540363 58540522 -8127483 - MER106B DNA MER1_type -36 1023 35 189 297 54 0 chr20 58540706 58540780 -8127225 + L2 LINE L2 3183 3260 -12 794 149 42 12 chr20 58541148 58541316 -8126689 - MER53 DNA DNA -1 188 16 494 189 0 0 chr20 58541317 58541412 -8126593 - MER53 DNA DNA -94 95 1 485 251 25 49 chr20 58541412 58541554 -8126451 - MER45A DNA AcHobo -37 141 4 2558 74 0 0 chr20 58542183 58542482 -8125523 - AluY SINE Alu -12 299 1 3266 196 22 28 chr20 58542543 58543160 -8124845 + L1MB5 LINE L1 5254 5867 -307 2396 110 3 0 chr20 58543160 58543468 -8124537 + AluSx SINE Alu 1 309 -3 3266 196 22 28 chr20 58543468 58543589 -8124416 + L1MB5 LINE L1 5867 5987 -187 338 197 14 14 chr20 58543662 58543733 -8124272 + MIR SINE MIR 75 145 -63 1912 162 84 2 chr20 58544402 58544796 -8123209 - MSTB LTR MaLR 0 426 1 307 321 0 28 chr20 58544796 58544902 -8123103 - MLT1K LTR MaLR -26 562 460 2460 89 0 3 chr20 58545447 58545751 -8122254 + AluSq SINE Alu 1 303 -10 361 238 0 0 chr20 58545753 58545833 -8122172 - L1MB7 LINE L1 -22 6162 6083 251 288 0 0 chr20 58545952 58546018 -8121987 - MIR SINE MIR -67 141 76 331 308 49 28 chr20 58546120 58546263 -8121742 + MLT1I LTR MaLR 190 335 -74 330 253 24 0 chr20 58546312 58546395 -8121610 + MLT1I LTR MaLR 325 409 0 1571 239 63 9 chr20 58546727 58547153 -8120852 + MLT1E3 LTR MaLR 176 624 0 1991 133 18 0 chr20 58547772 58547897 -8120108 + AluSx SINE Alu 1 122 -190 276 30 0 0 chr20 58547897 58547930 -8120075 + (CA)n Simple_repeat Simple_repeat 2 34 0 1991 133 18 0 chr20 58547930 58548090 -8119915 + AluSx SINE Alu 122 291 -21 180 0 0 0 chr20 58548090 58548110 -8119895 + (TA)n Simple_repeat Simple_repeat 2 21 0 435 266 69 37 chr20 58548482 58548700 -8119305 + L2 LINE L2 2841 3065 -248 299 267 42 14 chr20 58549381 58549527 -8118478 - L1ME1 LINE L1 0 6164 6016 414 266 24 8 chr20 58549570 58549694 -8118311 + L2 LINE L2 3147 3272 0 285 242 15 0 chr20 58549696 58549762 -8118243 - MIR SINE MIR -95 167 101 359 317 12 0 chr20 58550061 58550174 -8117831 + MIR SINE MIR 33 149 -59 1280 234 45 118 chr20 58550227 58550847 -8117158 - MLT1K LTR MaLR 0 588 14 1756 234 107 4 chr20 58551230 58551688 -8116317 - MLT1D LTR MaLR 0 505 1 433 223 160 11 chr20 58551898 58552073 -8115932 - L2 LINE L2 0 3313 3113 349 326 58 7 chr20 58552106 58552244 -8115761 - L2 LINE L2 0 3313 3169 906 282 25 3 chr20 58552556 58552840 -8115165 - MLT1H LTR MaLR -258 291 2 358 340 49 11 chr20 58553574 58553759 -8114246 + MIR SINE MIR 1 192 -70 198 320 0 53 chr20 58553842 58553917 -8114088 + MIR SINE MIR 17 87 -121 3485 148 47 6 chr20 58554977 58555619 -8112386 - L1MB3 LINE L1 -10 6173 5506 495 259 7 22 chr20 58555623 58555758 -8112247 - MIR SINE MIR -102 160 28 213 311 189 0 chr20 58555923 58556055 -8111950 + MIR SINE MIR 106 262 0 273 271 92 58 chr20 58556317 58556524 -8111481 - L2 LINE L2 -667 2647 2434 345 309 0 0 chr20 58556609 58556719 -8111286 - L3 LINE CR1 -483 1094 985 314 284 69 0 chr20 58556860 58556962 -8111043 + MIR SINE MIR 47 155 -107 343 286 4 18 chr20 58557052 58557086 -8110919 + (TGG)n Simple_repeat Simple_repeat 1 34 -1164 5208 121 17 55 chr20 58557086 58558025 -8109980 - MER4D LTR ERV1 0 903 1 343 286 4 18 chr20 58558025 58558268 -8109737 + (TGG)n Simple_repeat Simple_repeat 34 1198 0 352 235 6 6 chr20 58558306 58558485 -8109520 + (TGG)n Simple_repeat Simple_repeat 1 179 0 1689 196 29 14 chr20 58559524 58559871 -8108134 - MLT1A1 LTR MaLR 0 365 14 420 250 53 0 chr20 58561020 58561152 -8106853 + L2 LINE L2 2402 2540 -774 437 304 132 9 chr20 58561269 58561496 -8106509 - MLT1K LTR MaLR -19 569 315 382 261 5 33 chr20 58561765 58562357 -8105648 + (CACCC)n Simple_repeat Simple_repeat 1 575 0 204 134 15 30 chr20 58562413 58562480 -8105525 + (CACCC)n Simple_repeat Simple_repeat 4 69 0 2419 100 0 0 chr20 58562729 58563040 -8104965 + AluY SINE Alu 1 311 0 265 322 96 20 chr20 58563353 58563499 -8104506 + MIR SINE MIR 101 257 -5 1877 167 3 3 chr20 58563515 58563808 -8104197 + AluSx SINE Alu 1 293 -19 789 298 30 16 chr20 58564677 58564982 -8103023 + LTR16A LTR ERVL 18 326 -124 749 193 27 16 chr20 58565115 58565302 -8102703 + MER53 DNA DNA 1 189 0 427 280 20 100 chr20 58565476 58565591 -8102414 - MIR SINE MIR 0 262 168 1105 242 109 54 chr20 58565591 58565958 -8102047 - MLT1J LTR MaLR 0 511 109 2397 100 0 0 chr20 58565958 58566257 -8101748 - AluSx SINE Alu -13 299 1 1105 242 109 54 chr20 58566257 58566373 -8101632 - MLT1J LTR MaLR -402 109 1 427 280 20 100 chr20 58566373 58566457 -8101548 - MIR SINE MIR -94 168 79 218 250 0 0 chr20 58567285 58567337 -8100668 - MIR3 SINE MIR -1 207 156 287 326 21 35 chr20 58567352 58567496 -8100509 + MER117 DNA MER1_type 14 155 -42 228 371 49 21 chr20 58567545 58567688 -8100317 - MIR3 SINE MIR -57 151 5 296 164 0 49 chr20 58567870 58567931 -8100074 - MLT1J2 LTR MaLR -6 444 387 1613 183 154 39 chr20 58567944 58568386 -8099619 + MLT1D LTR MaLR 13 505 0 303 298 99 8 chr20 58568754 58568875 -8099130 + MIR3 SINE MIR 37 168 -40 1490 190 33 0 chr20 58569210 58569515 -8098490 + L1MB5 LINE L1 5854 6168 -6 730 209 57 19 chr20 58570040 58570251 -8097754 + MER20 DNA MER1_type 1 219 0 267 257 218 0 chr20 58570253 58570354 -8097651 + L2 LINE L2 3191 3313 0 270 326 37 22 chr20 58570469 58570604 -8097401 + L2 LINE L2 2799 2935 -379 279 349 77 6 chr20 58571997 58572166 -8095839 + LTR16C LTR ERVL 161 341 -150 281 317 106 19 chr20 58572454 58572617 -8095388 - MER5A DNA MER1_type -8 181 1 2180 196 60 48 chr20 58572762 58573381 -8094624 - MLT1E2 LTR MaLR 0 626 1 394 288 153 58 chr20 58573559 58573708 -8094297 + MLT1L LTR MaLR 312 445 -170 2147 103 24 0 chr20 58573708 58573830 -8094175 + AluSx SINE Alu 1 119 -193 273 57 0 0 chr20 58573830 58573865 -8094140 + (CA)n Simple_repeat Simple_repeat 2 36 0 2147 103 24 0 chr20 58573865 58574032 -8093973 + AluSx SINE Alu 119 297 -15 394 288 153 58 chr20 58574032 58574156 -8093849 + MLT1L LTR MaLR 445 611 -4 286 269 91 42 chr20 58574182 58574424 -8093581 + MLT1H LTR MaLR 14 278 -144 903 163 139 6 chr20 58575377 58575549 -8092456 + MER58A DNA MER1_type 30 224 0 283 238 12 12 chr20 58577184 58577264 -8090741 - MIR SINE MIR -64 198 119 342 0 0 0 chr20 58577693 58577731 -8090274 + (CA)n Simple_repeat Simple_repeat 1 38 0 888 294 95 14 chr20 58578780 58579442 -8088563 - L2 LINE L2 -1 3312 2592 335 204 0 107 chr20 58579486 58579589 -8088416 - MER96B DNA MER1_type? 0 417 326 * 1429 153 31 15 chr20 58579575 58579836 -8088169 + MER96B DNA MER1_type? 153 417 0 275 195 13 39 chr20 58580133 58580210 -8087795 - MLT1K LTR MaLR -322 266 192 235 290 0 0 chr20 58580926 58580988 -8087017 - MER113 DNA MER1_type? -2 519 458 21 0 0 0 chr20 58580997 58581018 -8086987 + AT_rich Low_complexity Low_complexity 1 21 0 2190 106 3 0 chr20 58581362 58581679 -8086326 - AluSx SINE Alu 0 318 1 965 167 41 50 chr20 58581860 58582081 -8085924 + MER20 DNA MER1_type 1 219 0 758 153 8 0 chr20 58582153 58582300 -8085705 + FLAM_C SINE Alu 1 148 0 722 237 158 14 chr20 58582413 58582628 -8085377 - MIR SINE MIR -2 260 15 2417 80 0 7 chr20 58583093 58583392 -8084613 - AluSq SINE Alu -16 297 1 2725 185 7 45 chr20 58583435 58584019 -8083986 - L1MB5 LINE L1 -10 6164 5603 345 250 87 0 chr20 58584035 58584127 -8083878 - MIR SINE MIR -118 144 45 649 186 0 50 chr20 58584281 58584421 -8083584 + AluJb SINE Alu 3 135 -177 304 266 62 26 chr20 58584859 58584972 -8083033 - MIR SINE MIR -62 146 30 464 261 108 6 chr20 58584978 58585154 -8082851 - MIR SINE MIR -24 238 45 223 64 21 43 chr20 58585229 58585276 -8082729 + (TTTTTG)n Simple_repeat Simple_repeat 2 47 0 952 256 0 9 chr20 58585710 58585933 -8082072 - MIR SINE MIR -34 228 8 420 296 156 7 chr20 58587082 58587303 -8080702 + MIR SINE MIR 11 257 -5 392 276 138 10 chr20 58587307 58587503 -8080502 + LTR16C LTR ERVL 182 402 -89 502 322 30 0 chr20 58587609 58587808 -8080197 + MIR SINE MIR 56 260 -2 655 207 0 0 chr20 58587874 58587995 -8080010 + MER45A DNA AcHobo 58 178 0 281 299 19 47 chr20 58588002 58588109 -8079896 + MIR SINE MIR 109 212 -50 4176 150 70 18 chr20 58588113 58588784 -8079221 + L1MB8 LINE L1 5293 6017 -161 1324 171 168 9 chr20 58588784 58589099 -8078906 - MLT1A1 LTR MaLR 0 365 1 4176 150 70 18 chr20 58589099 58589259 -8078746 + L1MB8 LINE L1 6017 6167 -11 488 160 10 0 chr20 58589412 58589512 -8078493 + (CA)n Simple_repeat Simple_repeat 2 102 0 285 188 174 0 chr20 58589980 58590049 -8077956 - MLT1L LTR MaLR -221 394 314 772 124 10 0 chr20 58590427 58590634 -8077371 + (TTCA)n Simple_repeat Simple_repeat 1 209 0 1837 159 48 55 chr20 58591262 58591697 -8076308 + MSTB1 LTR MaLR 1 432 0 565 218 48 7 chr20 58591877 58592024 -8075981 - MIR SINE MIR -11 251 99 288 304 30 22 chr20 58592992 58593127 -8074878 + HAL1 LINE L1 10 145 -2362 3894 159 44 38 chr20 58593507 58594275 -8073730 - MER4E LTR ERV1 0 779 7 1186 286 91 40 chr20 58594280 58595003 -8073002 + HAL1 LINE L1 965 1879 -628 4176 89 2 0 chr20 58595003 58595556 -8072449 - MER41A LTR ERV1 0 554 1 1186 286 91 40 chr20 58595556 58595983 -8072022 + HAL1 LINE L1 1879 2283 -224 1116 239 70 15 chr20 58595983 58596255 -8071750 - MLT1A1 LTR MaLR 0 365 79 1379 120 0 0 chr20 58596260 58596444 -8071561 - AluSg/x SINE Alu -12 300 117 2301 132 0 0 chr20 58596489 58596799 -8071206 + AluSx SINE Alu 1 310 -2 390 268 146 16 chr20 58596805 58596928 -8071077 + HAL1 LINE L1 1243 1381 -1126 292 290 20 20 chr20 58597097 58597197 -8070808 - MLT1K LTR MaLR -57 531 432 363 256 0 0 chr20 58597199 58597277 -8070728 - MER81 DNA DNA 0 114 37 971 210 0 54 chr20 58597289 58597513 -8070492 + MLT1A1 LTR MaLR 8 219 -146 335 256 99 16 chr20 58598337 58598458 -8069547 - MER91A DNA MER1_type -2 194 64 1933 262 68 28 chr20 58598667 58599388 -8068617 + L1ME3A LINE L1 5421 6170 0 381 283 59 79 chr20 58599473 58599777 -8068228 + L2 LINE L2 3009 3306 -7 28 48 0 0 chr20 58600019 58600061 -8067944 + AT_rich Low_complexity Low_complexity 1 42 0 346 217 76 25 chr20 58600076 58600233 -8067772 - L1ME4a LINE L1 -3 6118 5954 387 306 86 29 chr20 58600891 58601100 -8066905 + L1ME4a LINE L1 5873 6093 -28 2178 109 3 6 chr20 58602009 58602322 -8065683 - AluSp SINE Alu -1 312 1 234 91 0 0 chr20 58602461 58602494 -8065511 + (CA)n Simple_repeat Simple_repeat 2 34 0 204 186 163 58 chr20 58602847 58602933 -8065072 - MIR SINE MIR -86 122 28 536 295 192 13 chr20 58602949 58603251 -8064754 - L2 LINE L2 0 3313 2958 772 208 115 0 chr20 58603251 58603434 -8064571 - MER21B LTR ERV1 -498 365 162 189 107 0 0 chr20 58603434 58603462 -8064543 + (TTTC)n Simple_repeat Simple_repeat 3 30 0 262 186 163 81 chr20 58603569 58603655 -8064350 - MER21B LTR ERV1 -770 93 1 * 1020 227 190 52 chr20 58603655 58604032 -8063973 + MLT1D LTR MaLR 75 504 -1 231 164 30 60 chr20 58604079 58604146 -8063859 - L2 LINE L2 -524 2790 2726 454 305 39 0 chr20 58604174 58604328 -8063677 - MIR SINE MIR -24 238 79 575 240 88 9 chr20 58604687 58604863 -8063142 + MER20 DNA MER1_type 1 210 -9 1120 163 51 9 chr20 58605088 58605303 -8062702 - AluJb SINE Alu -2 310 87 2126 108 6 13 chr20 58605309 58605623 -8062382 - AluSq SINE Alu -1 312 1 228 242 45 0 chr20 58605812 58605878 -8062127 + L2 LINE L2 3244 3312 -1 615 207 14 7 chr20 58605928 58606073 -8061932 - MER45A DNA AcHobo 0 178 33 2109 193 112 85 chr20 58607170 58607807 -8060198 + MLT1E1 LTR MaLR 1 654 0 987 277 107 56 chr20 58607853 58608034 -8059971 + MLT1J LTR MaLR 52 222 -289 2558 127 6 3 chr20 58608034 58608397 -8059608 + THE1B LTR MaLR 1 364 0 987 277 107 56 chr20 58608397 58608645 -8059360 + MLT1J LTR MaLR 222 503 -8 386 200 38 122 chr20 58608649 58608803 -8059202 - MIR SINE MIR -63 145 19 323 248 135 24 chr20 58609114 58609428 -8058577 + L2 LINE L2 2743 3094 -219 494 200 26 17 chr20 58609474 58609589 -8058416 - ORSL DNA AcHobo 0 275 160 267 304 89 22 chr20 58609692 58609827 -8058178 + L2 LINE L2 3169 3312 -1 1254 229 122 72 chr20 58610216 58610431 -8057574 + MLT1D LTR MaLR 1 204 -301 2350 58 0 3 chr20 58610431 58610724 -8057281 + AluY SINE Alu 1 292 -19 1254 229 122 72 chr20 58610724 58610983 -8057022 + MLT1D LTR MaLR 204 499 -6 277 267 13 27 chr20 58611443 58611518 -8056487 + MIR SINE MIR 51 124 -138 354 251 36 66 chr20 58611877 58612044 -8055961 - Charlie8 DNA MER1_type -2186 231 70 2293 94 0 0 chr20 58613906 58614203 -8053802 - AluSx SINE Alu -15 297 1 241 200 344 44 chr20 58615379 58615469 -8052536 - MIR SINE MIR -35 227 111 418 250 23 0 chr20 58615509 58615597 -8052408 - MER20 DNA MER1_type -26 193 104 236 381 56 15 chr20 58615648 58615845 -8052160 - MER102a DNA MER1_type 0 330 126 333 320 7 14 chr20 58616015 58616162 -8051843 - L1MC5 LINE L1 -149 7812 7667 324 213 164 16 chr20 58616629 58616751 -8051254 + L3 LINE CR1 1427 1566 -11 467 207 170 69 chr20 58617040 58617228 -8050777 - ORSL DNA AcHobo -27 248 42 581 188 0 0 chr20 58617713 58617814 -8050191 + FRAM SINE Alu 76 176 0 182 235 0 0 chr20 58618304 58618338 -8049667 + L2 LINE L2 3142 3175 -97 253 305 86 39 chr20 58618372 58618500 -8049505 + L2 LINE L2 3180 3313 0 397 332 71 13 chr20 58619852 58620148 -8047857 + L2 LINE L2 2661 3048 -265 397 304 99 35 chr20 58620380 58620581 -8047424 + MLT1L LTR MaLR 399 612 -3 369 0 0 0 chr20 58620897 58620938 -8047067 + (CA)n Simple_repeat Simple_repeat 1 41 0 219 227 0 0 chr20 58621113 58621157 -8046848 + MIR SINE MIR 106 149 -59 1992 100 0 0 chr20 58621502 58621761 -8046244 - AluSx SINE Alu -20 292 34 212 375 128 8 chr20 58622092 58622335 -8045670 - L2 LINE L2 -81 3232 2961 472 259 0 9 chr20 58622940 58623048 -8044957 + MER117 DNA MER1_type 53 159 -38 275 293 37 0 chr20 58623043 58623125 -8044880 + MER117 DNA MER1_type 113 197 0 * 1828 165 30 0 chr20 58625369 58625672 -8042333 + AluJo SINE Alu 1 312 0 730 253 190 48 chr20 58625699 58626141 -8041864 - MLT1D LTR MaLR 0 505 1 391 267 9 0 chr20 58626737 58626842 -8041163 + MIR SINE MIR 39 144 -118 24 32 0 0 chr20 58626995 58627026 -8040979 + AT_rich Low_complexity Low_complexity 1 31 0 2191 115 0 0 chr20 58627099 58627394 -8040611 + AluSx SINE Alu 1 295 -17 420 323 15 8 chr20 58628171 58628304 -8039701 - L2 LINE L2 0 3313 3180 339 259 112 9 chr20 58628380 58628496 -8039509 - MLT1I LTR MaLR -276 133 6 366 290 57 10 chr20 58628497 58628690 -8039315 - L2 LINE L2 -280 3033 2832 726 231 161 38 chr20 58628745 58629111 -8038894 + MLT1C LTR MaLR 22 440 -27 370 294 33 28 chr20 58629186 58629366 -8038639 - L2 LINE L2 -610 2704 2524 616 276 0 0 chr20 58629375 58629531 -8038474 - L1MD2 LINE L1 0 6359 6204 401 286 30 64 chr20 58629539 58629773 -8038232 - L2 LINE L2 -798 2516 2291 215 328 0 0 chr20 58629881 58629945 -8038060 + MIR SINE MIR 193 256 -6 204 294 59 0 chr20 58630012 58630080 -8037925 + MIR SINE MIR 185 256 -6 184 296 0 0 chr20 58630081 58630125 -8037880 + MIR SINE MIR 213 256 -6 213 279 59 0 chr20 58630147 58630215 -8037790 + MIR SINE MIR 185 256 -6 * 565 277 92 62 chr20 58630211 58630579 -8037426 - L2 LINE L2 -1042 2272 1894 286 331 49 7 chr20 58630611 58630749 -8037256 - MIR SINE MIR -15 193 47 322 220 61 39 chr20 58631309 58631446 -8036559 + MIR SINE MIR 8 150 -62 399 245 102 20 chr20 58631518 58631665 -8036340 + MLT1L LTR MaLR 110 268 -347 270 0 0 0 chr20 58631701 58631731 -8036274 + (TC)n Simple_repeat Simple_repeat 2 31 0 2599 198 25 29 chr20 58632172 58632767 -8035238 + L1MB7 LINE L1 5571 6163 -21 211 333 160 20 chr20 58632938 58633088 -8034917 - MIR SINE MIR -78 184 14 699 241 12 12 chr20 58633495 58633665 -8034340 - MER45A DNA AcHobo 0 178 9 341 305 216 16 chr20 58633909 58634293 -8033712 - L2 LINE L2 0 3272 2812 826 171 46 7 chr20 58635051 58635203 -8032802 - MER20 DNA MER1_type -58 161 4 1741 104 0 104 chr20 58635562 58635880 -8032125 + AluSx SINE Alu 1 285 -27 360 65 73 24 chr20 58635881 58636004 -8032001 + (TA)n Simple_repeat Simple_repeat 1 129 0 303 320 70 53 chr20 58636006 58636250 -8031755 - L1ME4a LINE L1 -162 5959 5712 * 304 281 63 63 chr20 58636200 58636520 -8031485 + L1MCa LINE L1 1918 6980 -1342 487 168 155 32 chr20 58636895 58637050 -8030955 + MER53 DNA DNA 8 181 -8 810 262 122 30 chr20 58637261 58637407 -8030598 - L1ME1 LINE L1 -17 6149 6018 973 179 123 0 chr20 58637407 58637602 -8030403 + MER20 DNA MER1_type 1 219 0 810 262 122 30 chr20 58637602 58637920 -8030085 - L1ME1 LINE L1 -148 6018 5645 408 281 120 41 chr20 58638213 58638442 -8029563 + MLT1L LTR MaLR 237 503 -112 859 223 60 33 chr20 58638442 58638657 -8029348 + MER58A DNA MER1_type 1 221 -3 408 281 120 41 chr20 58638657 58638769 -8029236 + MLT1L LTR MaLR 503 605 -10 303 333 95 14 chr20 58638820 58639030 -8028975 - MIR SINE MIR -30 232 6 291 285 29 88 chr20 58640536 58640673 -8027332 + L2 LINE L2 3183 3311 -2 352 153 24 35 chr20 58640788 58640873 -8027132 - ORSL DNA AcHobo -61 214 131 574 135 104 0 chr20 58640883 58640979 -8027026 + FLAM_A SINE Alu 18 123 -19 278 151 23 105 chr20 58641008 58641045 -8026960 - ORSL DNA AcHobo -158 117 79 2191 116 0 0 chr20 58641045 58641348 -8026657 - AluSg SINE Alu -7 303 1 278 151 23 105 chr20 58641348 58641396 -8026609 - ORSL DNA AcHobo -196 79 39 346 310 70 23 chr20 58641650 58641821 -8026184 + MIR SINE MIR 20 198 -64 211 400 55 6 chr20 58641831 58641996 -8026009 - MIR SINE MIR -8 254 82 959 54 11 43 chr20 58642201 58642386 -8025619 + (TCTCC)n Simple_repeat Simple_repeat 2 180 0 574 235 68 0 chr20 58643522 58643654 -8024351 + L1PB3 LINE L1 6003 6143 -11 221 295 13 39 chr20 58644208 58644286 -8023719 + MIR SINE MIR 117 192 -70 745 240 87 5 chr20 58644322 58644518 -8023487 - MIR SINE MIR -49 213 2 1178 103 35 0 chr20 58644779 58644953 -8023052 + AluSg/x SINE Alu 117 296 -16 402 250 52 15 chr20 58644964 58645100 -8022905 + L1MC/D LINE L1 5624 5764 -2044 289 287 75 0 chr20 58645191 58645285 -8022720 + MER5A DNA MER1_type 9 109 -80 455 321 19 6 chr20 58645325 58645484 -8022521 - MIR SINE MIR -38 224 64 788 162 42 14 chr20 58646113 58646255 -8021750 + MER20 DNA MER1_type 15 160 -59 308 170 85 32 chr20 58646304 58646398 -8021607 - MER5A DNA MER1_type -80 109 11 334 361 88 14 chr20 58647121 58647337 -8020668 - MIR SINE MIR -11 251 20 813 205 4 0 chr20 58647488 58647732 -8020273 + (TGGA)n Simple_repeat Simple_repeat 1 245 0 535 336 31 18 chr20 58648039 58648268 -8019737 - MIR SINE MIR -14 248 17 1041 234 62 38 chr20 58648988 58649279 -8018726 + MLT1A1 LTR MaLR 1 298 -67 230 0 33 0 chr20 58649283 58649313 -8018692 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 478 313 45 35 chr20 58650437 58650638 -8017367 - MIR SINE MIR -47 215 13 197 244 0 0 chr20 58650799 58650840 -8017165 + MIR SINE MIR 110 150 -112 609 266 78 86 chr20 58651187 58651650 -8016355 + MLT1H LTR MaLR 84 542 -7 2984 13 0 0 chr20 58651960 58652277 -8015728 - AluYb8 SINE Alu -1 317 1 3084 171 26 16 chr20 58652408 58653050 -8014955 + L1MB7 LINE L1 5319 5967 -217 1499 180 0 76 chr20 58653050 58653378 -8014627 + AluJo SINE Alu 1 303 -9 399 56 0 0 chr20 58653388 58653442 -8014563 + (TA)n Simple_repeat Simple_repeat 1 54 0 1309 126 0 0 chr20 58653442 58653616 -8014389 + AluJb SINE Alu 132 305 -7 897 177 18 6 chr20 58653616 58653780 -8014225 + L1MB7 LINE L1 5964 6129 -55 304 239 14 0 chr20 58655601 58655672 -8012333 + MLT1D LTR MaLR 1 72 -433 1795 223 67 9 chr20 58655673 58656118 -8011887 + MLT1D LTR MaLR 35 505 0 188 310 14 0 chr20 58656384 58656455 -8011550 - L2 LINE L2 -265 3007 2936 194 263 105 0 chr20 58657434 58657491 -8010514 + MIR3 SINE MIR 113 175 -33 469 227 18 9 chr20 58657555 58657665 -8010340 - MER103 DNA DNA -1 165 55 252 231 231 37 chr20 58657954 58658088 -8009917 + MIR SINE MIR 85 244 -18 182 250 89 0 chr20 58658256 58658312 -8009693 - MIR SINE MIR -92 170 110 265 330 84 78 chr20 58658698 58659068 -8008937 + L2 LINE L2 2898 3269 -3 495 204 10 0 chr20 58660443 58660541 -8007464 - LTR16C LTR ERVL -17 474 376 647 271 74 3 chr20 58661801 58662075 -8005930 + L1MC3 LINE L1 7457 7961 -34 861 173 65 6 chr20 58662205 58662373 -8005632 + MER45A DNA AcHobo 1 178 0 256 139 5 112 chr20 58662923 58663110 -8004895 + (TGG)n Simple_repeat Simple_repeat 1 167 0 225 150 0 125 chr20 58663235 58663435 -8004570 + (TGG)n Simple_repeat Simple_repeat 3 177 0 708 251 11 6 chr20 58663605 58663784 -8004221 + MER20 DNA MER1_type 37 216 -3 389 226 60 0 chr20 58665202 58665286 -8002719 - L2 LINE L2 -21 3292 3204 183 255 98 0 chr20 58665454 58665505 -8002500 + MIR SINE MIR 92 147 -115 1780 186 10 0 chr20 58665682 58665983 -8002022 + AluJb SINE Alu 4 307 -5 1572 115 0 10 chr20 58667185 58667394 -8000611 + AluSg/x SINE Alu 92 298 -14 301 210 48 0 chr20 58667531 58667593 -8000412 - MER5B DNA MER1_type -110 68 4 528 267 15 0 chr20 58667670 58667805 -8000200 + MIR SINE MIR 15 151 -111 702 235 96 0 chr20 58669578 58669765 -7998240 - MIR SINE MIR -12 250 46 27 0 0 0 chr20 58669843 58669870 -7998135 + AT_rich Low_complexity Low_complexity 1 27 0 255 206 16 16 chr20 58670007 58670070 -7997935 + L2 LINE L2 3133 3195 -77 299 409 7 0 chr20 58670464 58670601 -7997404 + L1MC/D LINE L1 5534 5671 -2137 2469 89 0 0 chr20 58670973 58671275 -7996730 - AluSx SINE Alu -10 302 1 506 287 89 15 chr20 58672879 58673081 -7994924 + MIR SINE MIR 46 262 0 321 225 0 14 chr20 58673127 58673198 -7994807 + MER5B DNA MER1_type 1 70 -108 559 218 141 0 chr20 58673209 58673351 -7994654 + MER63A DNA MER1_type 12 173 -37 205 250 0 42 chr20 58673379 58673451 -7994554 + MER5B DNA MER1_type 108 176 -2 2459 78 0 3 chr20 58674829 58675125 -7992880 - AluY SINE Alu -16 295 1 949 266 45 14 chr20 58675243 58675532 -7992473 - L1ME3A LINE L1 -194 5976 5679 466 246 120 15 chr20 58676062 58676257 -7991748 - MIR SINE MIR -11 251 34 540 240 82 14 chr20 58676261 58676407 -7991598 + MIR SINE MIR 31 186 -76 423 0 0 0 chr20 58677001 58677048 -7990957 + (CA)n Simple_repeat Simple_repeat 2 48 0 227 246 100 27 chr20 58678883 58678993 -7989012 + L2 LINE L2 3146 3263 -9 1027 263 128 60 chr20 58679037 58679570 -7988435 - L1ME3A LINE L1 -10 6160 5592 197 329 67 27 chr20 58679711 58679860 -7988145 - L2 LINE L2 -220 3052 2898 180 352 55 0 chr20 58679993 58680084 -7987921 - L2 LINE L2 -582 2732 2637 252 315 11 11 chr20 58680140 58680229 -7987776 - MER117 DNA MER1_type 0 197 109 3332 180 17 12 chr20 58682090 58682780 -7985225 - L1MB2 LINE L1 -2 6169 5476 2492 64 23 9 chr20 58682800 58683144 -7984861 - THE1A LTR MaLR 0 355 7 11368 96 3 4 chr20 58683146 58684725 -7983280 - THE1A-int LTR MaLR 0 1580 4 2560 77 11 0 chr20 58684727 58685078 -7982927 - THE1A LTR MaLR 0 355 1 375 252 44 52 chr20 58685145 58685280 -7982725 - MIR SINE MIR -53 209 76 781 204 74 60 chr20 58686272 58686488 -7981517 + MER20 DNA MER1_type 1 219 0 325 281 173 22 chr20 58686503 58686642 -7981363 + MIR3 SINE MIR 18 177 -31 644 197 17 73 chr20 58686740 58686870 -7981135 + MER3 DNA MER1_type 42 161 -48 2246 114 0 3 chr20 58686870 58687168 -7980837 + AluSx SINE Alu 2 298 -14 644 197 17 73 chr20 58687168 58687215 -7980790 + MER3 DNA MER1_type 161 209 0 1891 141 35 0 chr20 58687361 58687645 -7980360 + AluSx SINE Alu 11 304 -8 182 255 0 39 chr20 58688153 58688204 -7979801 + MIR SINE MIR 126 174 -88 621 286 17 0 chr20 58688240 58688415 -7979590 - MER5A DNA MER1_type -8 181 4 370 306 38 16 chr20 58688640 58688826 -7979179 + MIR SINE MIR 2 191 -71 925 195 0 6 chr20 58689486 58689650 -7978355 - FRAM SINE Alu -4 172 10 2530 70 0 0 chr20 58689784 58690086 -7977919 - AluY SINE Alu -9 302 1 599 260 169 0 chr20 58690100 58690331 -7977674 + L1ME3A LINE L1 5896 6165 -5 548 253 68 34 chr20 58690678 58690855 -7977150 + MIR SINE MIR 35 219 -43 2368 118 0 0 chr20 58690855 58691161 -7976844 + AluSx SINE Alu 1 306 -6 548 253 68 34 chr20 58691161 58691204 -7976801 + MIR SINE MIR 219 259 -3 558 314 18 47 chr20 58691397 58691671 -7976334 - MLT1L LTR MaLR -122 493 228 431 306 100 38 chr20 58692659 58692920 -7975085 + MLT1L LTR MaLR 321 597 -18 2297 78 0 11 chr20 58692926 58693249 -7974756 - AluY SINE Alu 0 320 1 916 145 0 0 chr20 58694297 58694421 -7973584 + AluJb SINE Alu 1 124 -188 27 0 0 0 chr20 58694432 58694459 -7973546 + AT_rich Low_complexity Low_complexity 1 27 0 237 86 52 0 chr20 58694459 58694517 -7973488 + (TA)n Simple_repeat Simple_repeat 2 62 0 1017 177 0 43 chr20 58694525 58694711 -7973294 + AluJb SINE Alu 129 306 -6 237 309 96 27 chr20 58695333 58695521 -7972484 - MIR SINE MIR -51 211 11 2318 91 0 0 chr20 58695800 58696110 -7971895 + AluSx SINE Alu 1 310 0 1230 248 51 0 chr20 58696165 58696480 -7971525 - MER58B DNA MER1_type 0 341 11 848 189 162 0 chr20 58696984 58697169 -7970836 + MER20 DNA MER1_type 1 215 -4 1061 243 28 1 chr20 58697896 58698161 -7969844 - L1MD3 LINE L1 0 7808 7546 2523 90 7 0 chr20 58698161 58698471 -7969534 - AluSx SINE Alu 0 312 1 1061 243 28 1 chr20 58698471 58698486 -7969519 - L1MD3 LINE L1 -262 7546 7533 195 114 0 0 chr20 58698796 58698831 -7969174 + (A)n Simple_repeat Simple_repeat 1 35 0 191 338 56 0 chr20 58699422 58699493 -7968512 + MIR SINE MIR 118 192 -70 2294 122 0 0 chr20 58699666 58699977 -7968028 + AluSx SINE Alu 1 311 -1 412 264 74 14 chr20 58700389 58700537 -7967468 + Charlie7 DNA MER1_type 2067 2223 -389 380 279 14 29 chr20 58700537 58700677 -7967328 + MLT1I LTR MaLR 2 139 -270 2270 92 0 61 chr20 58700734 58701062 -7966943 + AluSq SINE Alu 1 308 -5 230 302 48 0 chr20 58701135 58701198 -7966807 + MLT1I LTR MaLR 148 213 -196 215 146 24 73 chr20 58701509 58701591 -7966414 + (TTAAA)n Simple_repeat Simple_repeat 3 80 0 189 0 0 0 chr20 58701973 58701994 -7966011 + (A)n Simple_repeat Simple_repeat 1 21 0 438 123 46 77 chr20 58702671 58702801 -7965204 - L1MD3 LINE L1 0 7995 7870 370 258 67 18 chr20 58703048 58703252 -7964753 - MIR SINE MIR 0 262 45 265 230 70 30 chr20 58708127 58708227 -7959778 - L1MC4a LINE L1 -1908 5900 5797 2518 70 3 9 chr20 58708895 58709256 -7958749 + AluSp SINE Alu 1 359 0 209 254 18 27 chr20 58710380 58710490 -7957515 + (CCCCG)n Simple_repeat Simple_repeat 5 113 0 189 0 0 0 chr20 58710811 58710832 -7957173 + (GGA)n Simple_repeat Simple_repeat 1 21 0 523 242 12 36 chr20 58712501 58712666 -7955339 + MER45A DNA AcHobo 16 176 -2 285 240 88 24 chr20 58713064 58713189 -7954816 - L2 LINE L2 -221 3051 2919 277 159 0 0 chr20 58713527 58713571 -7954434 + L2 LINE L2 3266 3309 -4 351 0 0 0 chr20 58713886 58713925 -7954080 + (TGAA)n Simple_repeat Simple_repeat 2 40 0 861 258 13 9 chr20 58714040 58714269 -7953736 + MIR SINE MIR 23 252 -10 186 261 62 0 chr20 58715907 58715972 -7952033 - MER5A DNA MER1_type -91 98 30 667 312 9 19 chr20 58716064 58716279 -7951726 - MIR SINE MIR -46 216 4 545 276 160 37 chr20 58716478 58716772 -7951233 - Charlie8 DNA MER1_type -2057 360 31 354 267 168 0 chr20 58717158 58717289 -7950716 + LTR67 LTR ERVL 35 187 -370 610 269 17 6 chr20 58717308 58717483 -7950522 + LTR67 LTR ERVL 381 557 0 695 199 15 51 chr20 58717647 58717843 -7950162 + MER53 DNA DNA 1 189 0 2129 153 0 3 chr20 58717983 58718291 -7949714 - AluSx SINE Alu -5 307 1 1065 280 106 13 chr20 58718306 58718702 -7949303 + MLT1K LTR MaLR 69 501 -87 310 303 147 0 chr20 58718757 58718866 -7949139 - MIR3 SINE MIR -51 157 33 285 330 39 7 chr20 58719211 58719351 -7948654 - MIR SINE MIR -61 147 3 755 207 16 11 chr20 58719412 58719600 -7948405 + MER53 DNA DNA 1 189 0 876 233 203 9 chr20 58719663 58719989 -7948016 + L2 LINE L2 2925 3313 0 395 269 145 0 chr20 58720431 58720576 -7947429 - MIR SINE MIR -57 205 40 279 228 18 114 chr20 58720583 58720635 -7947370 + MIR SINE MIR 110 165 -97 2120 116 3 3 chr20 58720635 58720919 -7947086 + AluSq SINE Alu 1 284 -29 180 77 0 0 chr20 58720922 58720948 -7947057 + (TAAA)n Simple_repeat Simple_repeat 4 29 0 279 228 18 114 chr20 58720948 58721005 -7947000 + MIR SINE MIR 167 212 -50 400 271 49 0 chr20 58721311 58721433 -7946572 + MER91C DNA MER1_type 13 140 0 213 266 284 28 chr20 58721448 58721775 -7946230 - L2 LINE L2 0 3313 2903 358 191 0 0 chr20 58722957 58723025 -7944980 + MER103 DNA DNA 10 77 -89 2385 78 0 0 chr20 58723026 58723308 -7944697 - AluSc SINE Alu -4 305 24 259 250 113 93 chr20 58723357 58723561 -7944444 - MLT1K LTR MaLR 0 588 381 2220 125 0 6 chr20 58723892 58724258 -7943747 + AluSq SINE Alu 3 366 0 236 390 76 0 chr20 58724419 58724537 -7943468 + L2 LINE L2 3146 3272 0 330 372 8 0 chr20 58724825 58724946 -7943059 - L2 LINE L2 -6 3307 3186 1616 85 0 0 chr20 58725100 58725301 -7942704 - AluSg/x SINE Alu -12 300 100 489 298 0 32 chr20 58725347 58725505 -7942500 + MIR SINE MIR 66 218 -44 2464 90 3 3 chr20 58725529 58725840 -7942165 + AluSx SINE Alu 1 311 -1 1995 141 0 7 chr20 58726365 58726668 -7941337 - AluSx SINE Alu 0 301 1 1964 123 10 30 chr20 58727997 58728298 -7939707 + AluJo SINE Alu 1 295 -17 1017 203 14 5 chr20 58728393 58728610 -7939395 + MER20 DNA MER1_type 1 219 0 394 246 67 55 chr20 58729122 58729297 -7938708 + MIR SINE MIR 14 182 -50 2037 146 0 25 chr20 58729298 58729613 -7938392 - AluJb SINE Alu -5 307 1 202 333 11 11 chr20 58729617 58729704 -7938301 + MIR SINE MIR 168 254 -8 2208 122 3 0 chr20 58729705 58730000 -7938005 - AluSg SINE Alu -14 296 1 185 186 139 0 chr20 58730198 58730241 -7937764 + L2 LINE L2 3221 3269 -3 245 192 19 0 chr20 58730270 58730322 -7937683 + MIR SINE MIR 46 98 -164 268 221 248 0 chr20 58730334 58730447 -7937558 + L2 LINE L2 2473 2613 -701 266 283 66 19 chr20 58730650 58730756 -7937249 + L2 LINE L2 3203 3313 0 564 344 10 5 chr20 58730788 58730980 -7937025 + MIR SINE MIR 12 204 -58 349 216 14 0 chr20 58731107 58731181 -7936824 + MER116 DNA Mariner 1 75 -5 263 211 0 14 chr20 58731506 58731577 -7936428 + CT-rich Low_complexity Low_complexity 3 72 0 301 295 141 0 chr20 58732187 58732343 -7935662 - MIR SINE MIR -6 256 79 578 243 26 20 chr20 58732616 58732768 -7935237 + MIR SINE MIR 40 192 -70 381 302 50 17 chr20 58732982 58733161 -7934844 - MIR SINE MIR -36 226 42 1520 201 52 69 chr20 58734409 58734872 -7933133 - MLT1C LTR MaLR -7 460 6 1019 229 66 0 chr20 58734947 58735252 -7932753 + MLT2F LTR ERVL 196 520 -143 512 296 67 14 chr20 58735416 58735639 -7932366 + LTR16A1 LTR ERVL 209 443 -14 615 167 35 9 chr20 58735946 58736060 -7931945 - L1MD3 LINE L1 -13 7982 7866 242 229 83 127 chr20 58736108 58736265 -7931740 - L2 LINE L2 -204 3068 2919 334 291 60 33 chr20 58737467 58737618 -7930387 + MIR SINE MIR 57 211 -51 586 276 61 11 chr20 58737753 58737934 -7930071 + MIR SINE MIR 73 262 0 333 226 94 98 chr20 58738001 58738106 -7929899 + L1MC4a LINE L1 5680 5784 -2024 2012 142 3 29 chr20 58738106 58738452 -7929553 - MER1B DNA MER1_type 0 337 1 333 226 94 98 chr20 58738452 58738580 -7929425 + L1MC4a LINE L1 5784 5912 -1896 255 344 49 25 chr20 58739316 58739334 -7928671 - MIR SINE MIR -28 234 218 1982 121 11 7 chr20 58739334 58739646 -7928359 - AluSx SINE Alu 0 313 1 255 344 49 25 chr20 58739646 58739789 -7928216 - MIR SINE MIR -44 218 68 1924 145 37 0 chr20 58740043 58740339 -7927666 - AluSq SINE Alu -2 311 5 185 243 0 122 chr20 58740346 58740420 -7927585 + L2 LINE L2 3248 3312 -1 1982 145 3 3 chr20 58740448 58740737 -7927268 - AluJb SINE Alu -23 289 1 380 277 115 44 chr20 58740873 58741194 -7926811 + L1MC4a LINE L1 5829 6172 -1636 1525 246 125 52 chr20 58741237 58741543 -7926462 + L1ME3 LINE L1 5460 5742 -420 2312 87 10 7 chr20 58741543 58741832 -7926173 + AluSg SINE Alu 3 292 -18 1525 246 125 52 chr20 58741832 58742180 -7925825 + L1ME3 LINE L1 5742 6162 0 1460 149 0 30 chr20 58742184 58742419 -7925586 + AluJb SINE Alu 85 312 0 2549 198 44 2 chr20 58742428 58742995 -7925010 + L1MB5 LINE L1 5572 6162 -12 2331 94 0 31 chr20 58742998 58743034 -7924971 - AluSx SINE Alu -2 310 274 231 36 0 0 chr20 58743034 58743062 -7924943 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 2331 94 0 31 chr20 58743062 58743345 -7924660 - AluSx SINE Alu -38 274 1 3986 76 39 27 chr20 58743347 58743941 -7924064 - L1PA11 LINE L1 -8 6166 5566 3031 110 21 0 chr20 58743943 58744415 -7923590 - L1PA11 LINE L1 -822 5324 4843 483 326 26 0 chr20 58744700 58744890 -7923115 + MIR SINE MIR 65 259 -3 331 316 101 51 chr20 58745794 58745873 -7922132 - MIR SINE MIR 0 262 188 2482 82 0 0 chr20 58745873 58746177 -7921828 - AluY SINE Alu -7 304 1 2152 110 7 3 chr20 58746177 58746469 -7921536 - AluSx SINE Alu -19 293 1 331 316 101 51 chr20 58746469 58746625 -7921380 - MIR SINE MIR -73 189 14 492 299 112 31 chr20 58747147 58747455 -7920550 + L2 LINE L2 2804 3152 -120 2506 82 2 72 chr20 58747455 58747805 -7920200 + THE1C LTR MaLR 1 321 -54 2140 108 24 0 chr20 58747805 58748092 -7919913 + AluSq SINE Alu 1 294 -19 2506 82 2 72 chr20 58748092 58748144 -7919861 + THE1C LTR MaLR 321 375 0 492 299 112 31 chr20 58748144 58748227 -7919778 + L2 LINE L2 3152 3227 -45 342 250 293 16 chr20 58748709 58748897 -7919108 + L1ME4a LINE L1 5825 6064 -57 1065 209 17 97 chr20 58749217 58749567 -7918438 + MLT1A2 LTR MaLR 53 374 0 819 225 167 93 chr20 58749574 58750046 -7917959 + MLT1K LTR MaLR 81 587 -1 228 219 0 47 chr20 58750219 58750283 -7917722 + CT-rich Low_complexity Low_complexity 2 62 0 317 270 109 40 chr20 58750391 58750475 -7917530 + MIR SINE MIR 77 154 -108 2112 130 3 0 chr20 58750475 58750760 -7917245 + AluSx SINE Alu 1 286 -26 317 270 109 40 chr20 58750760 58750849 -7917156 + MIR SINE MIR 154 262 0 219 265 44 29 chr20 58751706 58751774 -7916231 + L2 LINE L2 3118 3186 -86 754 272 9 9 chr20 58751910 58752127 -7915878 - MIR SINE MIR -32 230 14 325 247 69 101 chr20 58752300 58752547 -7915458 - L2 LINE L2 -8 3305 3067 672 221 0 0 chr20 58754183 58754323 -7913682 + MIR SINE MIR 46 185 -77 190 237 26 132 chr20 58754447 58754516 -7913489 - MIR SINE MIR -12 250 196 1762 145 24 24 chr20 58754516 58754813 -7913192 - AluJb SINE Alu -15 297 1 190 237 26 132 chr20 58754813 58754857 -7913148 - MIR SINE MIR -66 196 149 373 306 112 0 chr20 58754902 58755098 -7912907 - MLT1L LTR MaLR -49 566 349 333 306 108 5 chr20 58755542 58755764 -7912241 - L1M4 LINE L1 -1016 5130 4886 541 257 50 81 chr20 58755797 58756002 -7912003 - L1M4 LINE L1 -1327 4819 4632 653 97 0 29 chr20 58756002 58756105 -7911900 + HY3 scRNA scRNA 1 100 -1 541 257 50 81 chr20 58756105 58756319 -7911686 - L1M4 LINE L1 -1514 4632 4413 951 255 29 0 chr20 58756848 58757091 -7910914 - MIR SINE MIR -1 261 12 302 243 214 50 chr20 58757441 58757581 -7910424 + MLT1I LTR MaLR 104 266 -143 700 210 43 6 chr20 58758550 58758712 -7909293 - MIR SINE MIR -55 207 40 689 219 11 27 chr20 58759424 58759607 -7908398 + MIR SINE MIR 63 242 -20 445 232 20 66 chr20 58759633 58759784 -7908221 - L2 LINE L2 -1 3312 3169 293 200 0 0 chr20 58759914 58759964 -7908041 + MLT1I LTR MaLR 104 153 -256 424 231 8 5 chr20 58760251 58760385 -7907620 - L2 LINE L2 -307 3006 2871 2054 90 0 0 chr20 58760552 58760563 -7907442 - AluY SINE Alu -19 292 282 254 73 24 0 chr20 58760563 58760604 -7907401 + (TA)n Simple_repeat Simple_repeat 1 42 0 2054 90 0 0 chr20 58760604 58760848 -7907157 - AluY SINE Alu -28 283 37 929 294 45 49 chr20 58761350 58761843 -7906162 + MLT1K LTR MaLR 4 494 -94 566 228 144 71 chr20 58762039 58762160 -7905845 + L2 LINE L2 2743 2854 -459 2062 196 106 40 chr20 58762160 58762743 -7905262 - MLT1E3 LTR MaLR 0 624 3 566 228 144 71 chr20 58762743 58763067 -7904938 + L2 LINE L2 2854 3238 -75 249 266 22 79 chr20 58763240 58763314 -7904691 + MIR SINE MIR 77 141 -121 2508 73 3 0 chr20 58763314 58763615 -7904390 + AluSg SINE Alu 1 302 -8 249 266 22 79 chr20 58763615 58763679 -7904326 + MIR SINE MIR 141 207 -55 241 276 165 24 chr20 58763687 58763814 -7904191 + L1P4 LINE L1 5419 5563 -605 375 269 0 10 chr20 58764065 58764169 -7903836 - MIR SINE MIR -113 149 47 3075 189 19 2 chr20 58764258 58764845 -7903160 + L1MB7 LINE L1 5587 6183 -1 2128 130 0 0 chr20 58764857 58765157 -7902848 + AluSx SINE Alu 1 300 -12 246 286 48 29 chr20 58765228 58765333 -7902672 + MER103 DNA DNA 15 121 -45 821 273 31 18 chr20 58765351 58765578 -7902427 - MIR SINE MIR -10 252 23 1042 173 37 14 chr20 58765848 58766062 -7901943 - MER20 DNA MER1_type 0 219 1 275 308 114 43 chr20 58766105 58766391 -7901614 + L2 LINE L2 2858 3185 -128 1856 164 0 22 chr20 58766391 58766703 -7901302 - AluJb SINE Alu -5 307 3 275 308 114 43 chr20 58766703 58766838 -7901167 + L2 LINE L2 3185 3309 -4 2331 97 0 3 chr20 58767651 58767949 -7900056 + AluSx SINE Alu 1 297 -15 1868 215 37 50 chr20 58767957 58768253 -7899752 + L1MC5 LINE L1 7273 7571 -390 1939 158 17 45 chr20 58768253 58768672 -7899333 + L1MA8 LINE L1 5879 6285 -6 1868 215 37 50 chr20 58768672 58768998 -7899007 + L1MC5 LINE L1 7571 7887 -74 1077 133 6 6 chr20 58769809 58769975 -7898030 + FRAM SINE Alu 11 176 0 1730 122 112 4 chr20 58770217 58770495 -7897510 - AluJb SINE Alu -4 308 1 422 293 73 0 chr20 58771529 58771652 -7896353 + MIR SINE MIR 13 144 -118 263 305 10 71 chr20 58771682 58771737 -7896268 + L2 LINE L2 3116 3173 -140 2317 93 0 7 chr20 58771737 58772038 -7895967 + AluSq SINE Alu 1 299 -14 263 305 10 71 chr20 58772038 58772179 -7895826 + L2 LINE L2 3173 3300 -13 317 88 18 18 chr20 58772589 58772646 -7895359 - MER53 DNA DNA -5 184 128 907 160 12 24 chr20 58773056 58773225 -7894780 - FAM SINE Alu -13 172 6 503 188 8 47 chr20 58773234 58773362 -7894643 - MER53 DNA DNA -56 133 11 21 36 0 0 chr20 58778102 58778130 -7889875 + AT_rich Low_complexity Low_complexity 1 28 0 2530 64 0 0 chr20 58778304 58778600 -7889405 - AluY SINE Alu -13 298 3 234 216 68 135 chr20 58779644 58779792 -7888213 - L2 LINE L2 -1 3271 3134 485 174 0 23 chr20 58780239 58780325 -7887680 - AluJ/FRAM SINE Alu -15 297 214 228 333 20 10 chr20 58780991 58781090 -7886915 - MIR SINE MIR -56 206 107 354 290 76 7 chr20 58781174 58781319 -7886686 - MIR SINE MIR -96 166 12 501 321 118 0 chr20 58781459 58781680 -7886325 - MIR SINE MIR -14 248 2 331 233 20 100 chr20 58781685 58781835 -7886170 - L1ME LINE L1 -355 5766 5629 406 186 14 0 chr20 58781944 58782014 -7885991 - tRNA-His-CAC tRNA tRNA 0 75 5 2092 115 3 14 chr20 58782025 58782339 -7885666 - AluSq SINE Alu 0 311 1 2285 113 13 3 chr20 58782584 58782893 -7885112 - AluSx SINE Alu 0 312 1 582 173 30 30 chr20 58783603 58783736 -7884269 + MER5A DNA MER1_type 1 133 -56 851 186 7 7 chr20 58783901 58784046 -7883959 - FRAM SINE Alu -26 150 6 1965 137 0 17 chr20 58784628 58784928 -7883077 + AluSx SINE Alu 1 295 -17 633 283 64 25 chr20 58785182 58785496 -7882509 - L1ME4a LINE L1 -185 5936 5611 26 30 0 0 chr20 58787870 58787903 -7880102 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr20 58788176 58788204 -7879801 + AT_rich Low_complexity Low_complexity 1 28 0 234 225 212 26 chr20 58788511 58788662 -7879343 - MIR SINE MIR 0 262 84 770 213 60 0 chr20 58788702 58788852 -7879153 - MER45A DNA AcHobo -19 159 1 930 231 0 24 chr20 58788917 58789125 -7878880 - MIR SINE MIR -21 241 39 1635 195 20 3 chr20 58789964 58790262 -7877743 + AluJo SINE Alu 1 303 -9 22 56 0 0 chr20 58791167 58791203 -7876802 + AT_rich Low_complexity Low_complexity 1 36 0 2135 116 0 13 chr20 58791266 58791568 -7876437 + AluSg SINE Alu 2 299 -11 444 272 68 31 chr20 58791637 58791828 -7876177 + MIR SINE MIR 21 218 -44 4779 128 129 68 chr20 58792360 58793791 -7874214 + pTR5 LTR ERV1 741 2438 0 408 271 0 0 chr20 58793794 58793912 -7874093 + MIR SINE MIR 103 219 -43 557 218 18 48 chr20 58793955 58794120 -7873885 + MER5B DNA MER1_type 2 161 -17 346 220 88 0 chr20 58794121 58794212 -7873793 + MER5A DNA MER1_type 4 102 -87 1458 89 0 0 chr20 58794815 58794994 -7873011 - AluSq SINE Alu -27 286 108 438 148 0 0 chr20 58794998 58795099 -7872906 + (G)n Simple_repeat Simple_repeat 1 101 0 842 85 0 17 chr20 58795102 58795220 -7872785 - AluSq SINE Alu -197 116 1 223 296 0 12 chr20 58795719 58795800 -7872205 - MIR3 SINE MIR -20 188 109 184 277 116 27 chr20 58795873 58795985 -7872020 + L2 LINE L2 3025 3146 -167 346 242 76 0 chr20 58796295 58796427 -7871578 - L1MB7 LINE L1 -9 6175 6034 276 254 62 77 chr20 58796428 58796637 -7871368 - L2 LINE L2 -273 3040 2835 339 326 121 0 chr20 58796839 58796971 -7871034 - MIR SINE MIR -40 222 75 209 326 114 8 chr20 58797368 58797500 -7870505 - MIR SINE MIR -12 250 105 717 155 93 31 chr20 58797870 58798031 -7869974 + L1MC3 LINE L1 7614 7784 -1 420 315 157 13 chr20 58799409 58799714 -7868291 + L1ME4a LINE L1 5295 5643 -2165 334 165 248 0 chr20 58800116 58800237 -7867768 + L1ME4a LINE L1 5959 6109 -12 253 256 128 0 chr20 58801074 58801191 -7866814 - LTR33 LTR ERVL -295 226 95 773 238 91 20 chr20 58801270 58801522 -7866483 - L1ME1 LINE L1 -5 6161 5892 2075 123 3 7 chr20 58803680 58803990 -7864015 - AluSx SINE Alu -3 309 1 729 158 38 49 chr20 58805411 58805595 -7862410 + MER53 DNA DNA 8 189 0 4390 123 6 2 chr20 58805862 58806494 -7861511 - MER41B LTR ERV1 0 635 1 359 274 82 15 chr20 58806548 58806683 -7861322 + MIR SINE MIR 65 208 -54 427 306 75 0 chr20 58806884 58807018 -7860987 + L2 LINE L2 2679 2822 -492 196 0 86 29 chr20 58807417 58807452 -7860553 + T-rich Low_complexity Low_complexity 2 38 0 438 74 0 0 chr20 58807454 58807508 -7860497 - AluJ/FRAM SINE Alu -30 282 229 1789 152 14 10 chr20 58807536 58807826 -7860179 + AluJb SINE Alu 1 291 -21 421 229 124 0 chr20 58807941 58808046 -7859959 - MIR SINE MIR -102 160 43 869 203 0 0 chr20 58808434 58808597 -7859408 - MER58B DNA MER1_type 0 341 179 2292 229 54 54 chr20 58808600 58808955 -7859050 + MER82 DNA MER2_type 1 358 -295 1900 162 7 16 chr20 58808955 58809264 -7858741 - AluJb SINE Alu -6 306 1 2292 229 54 54 chr20 58809264 58809555 -7858450 + MER82 DNA MER2_type 357 647 -6 879 195 24 0 chr20 58809562 58809731 -7858274 - MER58B DNA MER1_type -168 173 1 264 321 12 0 chr20 58810557 58810638 -7857367 - L2 LINE L2 0 3272 3191 1962 115 50 4 chr20 58810643 58810922 -7857083 + AluJb SINE Alu 1 292 -20 2071 119 3 7 chr20 58811407 58811735 -7856270 - AluSx SINE Alu 0 327 1 2360 78 10 7 chr20 58812191 58812499 -7855506 + AluY SINE Alu 1 309 -2 358 354 56 0 chr20 58812636 58812780 -7855225 + L1ME LINE L1 5486 5637 -484 2422 80 3 3 chr20 58812827 58813127 -7854878 + AluSp SINE Alu 1 300 -13 667 200 77 145 chr20 58813135 58813460 -7854545 + MER58B DNA MER1_type 39 341 0 198 167 0 0 chr20 58814211 58814247 -7853758 + GA-rich Low_complexity Low_complexity 3 38 0 1148 106 0 11 chr20 58814247 58814427 -7853578 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 2162 96 35 0 chr20 58814429 58814730 -7853275 + AluSq SINE Alu 1 313 0 375 247 0 0 chr20 58814742 58814831 -7853174 - Charlie5 DNA MER1_type -2523 89 1 2011 145 10 0 chr20 58816205 58816495 -7851510 + AluSx SINE Alu 2 294 -18 456 230 26 9 chr20 58816561 58816674 -7851331 - MIR SINE MIR -60 202 88 221 136 0 23 chr20 58816729 58816773 -7851232 + (TTCC)n Simple_repeat Simple_repeat 2 44 0 190 340 0 0 chr20 58816953 58817006 -7850999 - L2 LINE L2 -4 3268 3216 1025 222 14 0 chr20 58817016 58817228 -7850777 - MER20 DNA MER1_type -4 215 1 526 292 79 40 chr20 58817311 58817640 -7850365 - L1MC4a LINE L1 -329 5792 5491 1955 134 40 3 chr20 58818266 58818565 -7849440 + AluSx SINE Alu 1 310 -2 1424 186 107 0 chr20 58818907 58819170 -7848835 + AluJo SINE Alu 3 293 -19 1231 296 10 13 chr20 58819266 58819661 -7848344 - L1MC4a LINE L1 -1875 5933 5540 1875 225 18 20 chr20 58820208 58820720 -7847285 + MLT1F LTR MaLR 15 542 0 188 269 128 0 chr20 58820932 58821010 -7846995 + MIR SINE MIR 65 152 -110 419 336 31 0 chr20 58821108 58821236 -7846769 - L2 LINE L2 0 3272 3141 189 296 101 101 chr20 58821561 58821869 -7846136 + L2 LINE L2 2900 3207 -106 879 165 0 0 chr20 58821905 58822038 -7845967 - AluSq/x SINE Alu -180 133 1 222 264 184 10 chr20 58822038 58822167 -7845838 + MIR3 SINE MIR 20 170 -38 1557 134 94 7 chr20 58822195 58822493 -7845512 - MER33 DNA MER1_type 0 324 1 2217 123 3 3 chr20 58822906 58823214 -7844791 - AluSx SINE Alu -4 308 1 504 269 109 94 chr20 58823662 58824131 -7843874 + MLT1K LTR MaLR 1 476 0 286 366 52 33 chr20 58824153 58824306 -7843699 - MIR3 SINE MIR -49 159 4 1496 224 91 36 chr20 58824314 58824788 -7843217 - MLT1D LTR MaLR 0 505 6 492 211 78 66 chr20 58825166 58825332 -7842673 + MIR SINE MIR 35 202 -60 200 280 65 28 chr20 58826144 58826251 -7841754 - MIR SINE MIR -34 228 118 275 157 79 11 chr20 58826395 58826484 -7841521 - L1ME4a LINE L1 0 6121 6027 2378 82 3 3 chr20 58826568 58826871 -7841134 - AluSp SINE Alu -10 303 1 341 253 117 51 chr20 58826916 58827033 -7840972 - L1ME LINE L1 -368 5753 5645 1955 134 29 26 chr20 58827033 58827339 -7840666 - AluJo SINE Alu -5 307 1 341 253 117 51 chr20 58827339 58827494 -7840511 - L1ME LINE L1 -476 5645 5463 2141 122 3 10 chr20 58827804 58828107 -7839898 - AluJb SINE Alu -11 301 1 185 246 115 16 chr20 58828252 58828313 -7839692 + MIR SINE MIR 159 225 -37 336 243 0 54 chr20 58828604 58828715 -7839290 - L2 LINE L2 -21 3292 3188 192 329 57 14 chr20 58829831 58829901 -7838104 - MIR SINE MIR -162 100 28 1936 145 33 0 chr20 58829910 58830217 -7837788 - AluSx SINE Alu 0 316 1 180 186 0 47 chr20 58830709 58830752 -7837253 + MIR SINE MIR 83 123 -139 219 315 142 7 chr20 58831611 58831804 -7836201 - MIR SINE MIR -48 214 5 2299 112 0 0 chr20 58833022 58833325 -7834680 - AluSc SINE Alu -6 303 1 238 301 0 60 chr20 58833395 58833578 -7834427 + GA-rich Low_complexity Low_complexity 1 172 0 252 286 5 49 chr20 58833638 58833823 -7834182 + GA-rich Low_complexity Low_complexity 1 177 0 368 271 71 14 chr20 58833996 58834136 -7833869 + L2 LINE L2 3122 3269 -3 247 319 60 17 chr20 58834579 58834695 -7833310 - L2 LINE L2 -15 3257 3137 200 192 19 19 chr20 58834820 58834872 -7833133 - L2 LINE L2 -339 2975 2924 189 200 0 44 chr20 58835800 58835845 -7832160 - MIR SINE MIR -117 145 103 184 346 0 0 chr20 58836252 58836304 -7831701 - L2 LINE L2 -25 3247 3196 1470 144 39 56 chr20 58836367 58836651 -7831354 + AluJo SINE Alu 1 279 -33 321 303 111 59 chr20 58836691 58837173 -7830832 - L2 LINE L2 -9 3263 2706 2345 104 0 0 chr20 58837177 58837486 -7830519 - AluY SINE Alu -2 309 1 478 230 56 0 chr20 58837510 58837636 -7830369 - MER58B DNA MER1_type -5 336 204 601 193 61 0 chr20 58837768 58837882 -7830123 + MER46A DNA MER2_type 1 121 -115 330 26 0 0 chr20 58837882 58837921 -7830084 + (TG)n Simple_repeat Simple_repeat 2 40 0 731 194 30 22 chr20 58837922 58838056 -7829949 - AluJo SINE Alu -176 136 2 539 219 8 8 chr20 58838058 58838186 -7829819 + MER46A DNA MER2_type 109 236 0 731 274 152 15 chr20 58838190 58838533 -7829472 - L2 LINE L2 -36 3277 2888 2217 126 10 0 chr20 58839272 58839581 -7828424 - AluSx SINE Alu 0 312 1 688 235 119 11 chr20 58839581 58839841 -7828164 + LTR37A LTR ERV1 139 426 0 512 254 78 57 chr20 58839841 58840034 -7827971 - MIR SINE MIR -59 203 7 1907 136 4 4 chr20 58840354 58840634 -7827371 + AluJb SINE Alu 14 293 -19 573 320 51 0 chr20 58841000 58841197 -7826808 - MIR SINE MIR -6 256 50 2046 210 73 20 chr20 58841368 58841877 -7826128 + MLT1F LTR MaLR 5 540 -2 781 305 27 25 chr20 58841881 58842369 -7825636 + MLT1F-int LTR MaLR 4 611 -760 262 341 16 16 chr20 58842548 58842671 -7825334 + MLT1F-int LTR MaLR 756 878 -493 1079 197 24 5 chr20 58843267 58843480 -7824525 + MER20 DNA MER1_type 3 219 0 456 230 23 0 chr20 58843495 58843582 -7824423 + MER5A DNA MER1_type 18 106 -83 254 309 81 8 chr20 58843744 58843867 -7824138 - MIR SINE MIR -117 145 14 271 250 42 42 chr20 58843898 58843994 -7824011 + MER5B DNA MER1_type 81 176 -2 1578 187 3 3 chr20 58843997 58844280 -7823725 - AluJo SINE Alu -29 283 1 391 333 29 29 chr20 58844291 58844465 -7823540 - MER5A DNA MER1_type -6 183 10 357 291 26 13 chr20 58844564 58844715 -7823290 + MER106B DNA MER1_type 896 1048 -11 294 285 69 8 chr20 58844678 58844808 -7823197 + MER113 DNA MER1_type? 194 331 -190 * 804 273 88 62 chr20 58844942 58845397 -7822608 + LTR67 LTR ERVL 36 502 -55 701 176 131 35 chr20 58845446 58845645 -7822360 - MER20 DNA MER1_type -1 218 1 256 115 26 90 chr20 58846025 58846088 -7821917 - L1PB2 LINE L1 -2 6149 6090 1832 169 0 13 chr20 58846088 58846396 -7821609 - AluJo SINE Alu -8 304 1 256 115 26 90 chr20 58846396 58846410 -7821595 - L1PB2 LINE L1 -61 6090 6077 194 337 12 24 chr20 58846428 58846511 -7821494 + L2 LINE L2 2725 2806 -508 977 186 46 42 chr20 58846886 58847123 -7820882 + MIR SINE MIR 25 262 0 394 276 100 13 chr20 58847183 58847422 -7820583 - MIR SINE MIR 0 262 3 427 213 118 31 chr20 58848803 58848930 -7819075 + L2 LINE L2 3176 3313 0 620 271 130 6 chr20 58848938 58849115 -7818890 - MIR SINE MIR -61 201 3 576 249 69 41 chr20 58849704 58849910 -7818095 + MIR SINE MIR 19 238 -24 1868 226 81 17 chr20 58849988 58850471 -7817534 + LTR40a LTR ERVL 1 514 -5 2357 78 0 0 chr20 58850637 58850941 -7817064 - AluY SINE Alu 0 304 1 310 186 293 8 chr20 58850941 58851070 -7816935 - MLT1E2 LTR MaLR -435 191 64 274 257 128 0 chr20 58851159 58851268 -7816737 - MLT1L LTR MaLR -325 290 168 299 235 12 35 chr20 58851598 58851683 -7816322 - MLT1F1 LTR MaLR -1 566 472 330 167 48 60 chr20 58851906 58851990 -7816015 - MLT1H LTR MaLR -390 159 77 205 286 0 117 chr20 58853005 58853075 -7814930 - MIR SINE MIR -1 261 217 2155 135 3 3 chr20 58853075 58853387 -7814618 - AluSx SINE Alu 0 312 1 205 286 0 117 chr20 58853387 58853470 -7814535 - MIR SINE MIR -45 217 126 226 154 26 0 chr20 58853470 58853509 -7814496 + MER58A DNA MER1_type 1 40 -184 375 221 29 58 chr20 58853524 58853598 -7814407 + MER58B DNA MER1_type 240 312 -2108 2159 227 36 16 chr20 58853598 58854091 -7813914 - MLT1D LTR MaLR -2 503 1 375 221 29 58 chr20 58854091 58854120 -7813885 + MER58B DNA MER1_type 312 340 -1 1005 313 35 37 chr20 58854138 58854527 -7813478 + L2 LINE L2 2686 3072 -241 2343 107 3 0 chr20 58854527 58854837 -7813168 + AluSx SINE Alu 1 311 -1 1005 313 35 37 chr20 58854837 58855032 -7812973 + L2 LINE L2 3072 3266 -47 544 273 207 4 chr20 58855081 58855323 -7812682 - MER110 LTR ERV1 -155 336 46 309 241 46 46 chr20 58855422 58855509 -7812496 - MIR SINE MIR -159 103 17 2018 122 61 22 chr20 58855603 58855964 -7812041 + THE1C LTR MaLR 1 375 0 241 314 58 0 chr20 58856511 58856597 -7811408 + MIR SINE MIR 158 248 -14 1446 128 115 0 chr20 58856850 58857068 -7810937 + AluSg SINE Alu 5 247 -63 203 200 0 0 chr20 58857069 58857104 -7810901 + A-rich Low_complexity Low_complexity 1 35 0 311 314 36 29 chr20 58857861 58857998 -7810007 - MIR SINE MIR -71 191 54 681 66 0 0 chr20 58858720 58858811 -7809194 + (TTCA)n Simple_repeat Simple_repeat 4 94 0 387 269 0 10 chr20 58858815 58858919 -7809086 - L2 LINE L2 -14 3299 3197 261 0 0 0 chr20 58911060 58911089 -7756916 + (GAAA)n Simple_repeat Simple_repeat 4 32 0 2397 115 6 15 chr20 58911808 58912148 -7755857 + MER1B DNA MER1_type 1 337 0 1847 125 34 7 chr20 58912756 58913053 -7754952 - AluSx SINE Alu -7 305 1 297 305 43 0 chr20 58913119 58913230 -7754775 + MIR SINE MIR 44 161 -47 1599 133 31 0 chr20 58913235 58913491 -7754514 + AluJo SINE Alu 34 297 -15 889 243 0 0 chr20 58913491 58913668 -7754337 + AluJo/FRAM SINE Alu 134 310 -2 227 348 124 12 chr20 58913705 58913866 -7754139 - L2 LINE L2 -2 3311 3133 185 323 97 11 chr20 58913905 58913998 -7754007 - MIR SINE MIR -145 117 17 623 258 30 0 chr20 58914554 58914686 -7753319 + MER58A DNA MER1_type 1 136 0 379 209 52 8 chr20 58914867 58915001 -7753004 + L1MC4 LINE L1 7903 8042 0 24 0 0 0 chr20 58915481 58915505 -7752500 + AT_rich Low_complexity Low_complexity 1 24 0 1949 136 149 11 chr20 58916244 58916620 -7751385 - MSTA LTR MaLR 0 428 1 1994 153 10 0 chr20 58917432 58917740 -7750265 + AluSx SINE Alu 1 311 -1 242 200 0 0 chr20 58917793 58917843 -7750162 + L1ME LINE L1 5621 5670 -451 2207 98 7 0 chr20 58917851 58918157 -7749848 - AluSc SINE Alu -1 308 1 565 377 106 16 chr20 58918960 58919024 -7748981 + L2 LINE L2 1119 1176 -2138 3055 148 80 7 chr20 58919024 58919577 -7748428 - LTR49 LTR ERV1 0 595 3 565 377 106 16 chr20 58919577 58920279 -7747726 + L2 LINE L2 1176 1954 -1360 425 299 31 8 chr20 58920718 58920845 -7747160 + L2 LINE L2 3179 3308 -5 329 337 60 20 chr20 58920836 58921085 -7746920 + L2 LINE L2 2333 2591 -723 * 2884 250 58 7 chr20 58921085 58922155 -7745850 + L1MB2 LINE L1 5038 6167 -4 2137 67 50 0 chr20 58923868 58924151 -7743854 - AluSg SINE Alu -13 297 1 295 306 224 0 chr20 58924813 58925009 -7742996 + MIR SINE MIR 21 260 -2 452 179 62 9 chr20 58926214 58926229 -7741776 - L1MA10 LINE L1 0 6334 6320 1006 283 107 11 chr20 58926229 58926603 -7741402 - L1ME1 LINE L1 -5 6161 5752 871 114 0 0 chr20 58930688 58930811 -7737194 + FLAM_C SINE Alu 1 123 -10 547 224 46 91 chr20 58931217 58931242 -7736763 + MIR SINE MIR 5 30 -232 1597 128 82 29 chr20 58931242 58931523 -7736482 + AluSx SINE Alu 1 296 -16 547 224 46 91 chr20 58931523 58931738 -7736267 + MIR SINE MIR 30 234 -28 389 201 165 106 chr20 58932383 58932637 -7735368 + MER33 DNA MER1_type 56 324 0 1531 159 3 84 chr20 58932970 58933304 -7734701 - AluJb SINE Alu -3 309 3 615 148 65 0 chr20 58933701 58933809 -7734196 - L1MA10 LINE L1 -2 6332 6218 1043 170 0 0 chr20 58934108 58934296 -7733709 - AluSg/x SINE Alu -7 303 116 1723 230 26 5 chr20 58934915 58935297 -7732708 + MLT1B LTR MaLR 1 390 0 1483 101 136 80 chr20 58935805 58936091 -7731914 - AluSx SINE Alu 0 302 1 1485 257 87 11 chr20 58936427 58936866 -7731139 - MLT1D LTR MaLR 0 505 34 2117 70 4 11 chr20 58937097 58937368 -7730637 - AluSx SINE Alu -17 295 27 412 221 19 10 chr20 58937786 58937890 -7730115 + MIR SINE MIR 107 211 -51 550 186 59 106 chr20 58938075 58938152 -7729853 - Charlie4a DNA MER1_type -1466 495 416 1348 164 156 19 chr20 58938152 58938415 -7729590 + AluJo SINE Alu 2 300 -2 550 186 59 106 chr20 58938415 58938465 -7729540 - Charlie4a DNA MER1_type -1545 416 365 783 172 0 15 chr20 58938465 58938599 -7729406 + FLAM_A SINE Alu 1 132 -1 550 186 59 106 chr20 58938599 58938706 -7729299 - Charlie4a DNA MER1_type -1596 365 271 484 33 0 0 chr20 58938714 58938774 -7729231 - AluY SINE Alu -15 294 235 1395 140 140 4 chr20 58938792 58939057 -7728948 + AluJo SINE Alu 1 301 -11 22 0 0 0 chr20 58939159 58939181 -7728824 + GC_rich Low_complexity Low_complexity 1 22 0 21 71 0 0 chr20 58939263 58939305 -7728700 + GC_rich Low_complexity Low_complexity 1 42 0 24 32 0 0 chr20 58939350 58939381 -7728624 + GC_rich Low_complexity Low_complexity 1 31 0 702 211 20 20 chr20 58940400 58940552 -7727453 + MER45A DNA AcHobo 27 178 0 204 336 26 18 chr20 58941015 58941128 -7726877 + L2 LINE L2 3159 3272 -41 24 53 0 0 chr20 58941267 58941305 -7726700 + GC_rich Low_complexity Low_complexity 1 38 0 229 263 323 0 chr20 58942902 58943001 -7725004 + MIR SINE MIR 28 158 -104 227 273 0 0 chr20 58944332 58944398 -7723607 + MIR SINE MIR 21 86 -176 339 275 0 0 chr20 58944506 58944586 -7723419 - MIR SINE MIR -79 183 104 651 143 8 63 chr20 58946009 58946135 -7721870 - MER20 DNA MER1_type -68 151 33 456 261 46 77 chr20 58946180 58946375 -7721630 - MLT1L LTR MaLR -202 391 121 377 238 124 0 chr20 58947101 58947206 -7720799 - L2 LINE L2 -2 3270 3153 435 295 23 36 chr20 58947277 58947589 -7720416 + L1MD3 LINE L1 6054 7984 -11 234 0 0 0 chr20 58947625 58947651 -7720354 + (TG)n Simple_repeat Simple_repeat 2 27 0 579 306 128 43 chr20 58948464 58948996 -7719009 - L2 LINE L2 -411 2903 2327 208 266 60 0 chr20 58949494 58949590 -7718415 - MIR SINE MIR -56 152 47 289 330 62 41 chr20 58951025 58951322 -7716683 - L2 LINE L2 -305 3008 2697 2042 98 3 0 chr20 58951322 58951607 -7716398 - AluSc SINE Alu -10 299 14 289 330 62 41 chr20 58951607 58951667 -7716338 - L2 LINE L2 -616 2697 2640 21 0 0 0 chr20 58952089 58952110 -7715895 + GC_rich Low_complexity Low_complexity 1 21 0 692 205 35 87 chr20 58952334 58952563 -7715442 - MER20 DNA MER1_type -2 217 1 251 311 83 8 chr20 58952576 58952708 -7715297 - MIR SINE MIR -74 188 47 244 259 54 36 chr20 58952892 58953004 -7715001 + MIR SINE MIR 58 171 -37 2113 117 0 0 chr20 58953005 58953295 -7714710 - AluSg SINE Alu -20 290 1 245 258 62 80 chr20 58954450 58954675 -7713330 + L2 LINE L2 2987 3207 -65 197 211 189 33 chr20 58955561 58955651 -7712354 - MIR SINE MIR -124 138 35 273 228 130 22 chr20 58955763 58955855 -7712150 + MIR SINE MIR 16 117 -145 2451 56 0 3 chr20 58956087 58956390 -7711615 + AluY SINE Alu 1 302 -9 204 219 94 16 chr20 58960182 58960246 -7707759 + L2 LINE L2 3169 3237 -35 300 370 0 11 chr20 58960256 58960437 -7707568 + (CATA)n Simple_repeat Simple_repeat 1 179 0 * 437 316 0 29 chr20 58960330 58960703 -7707302 + (CA)n Simple_repeat Simple_repeat 1 362 0 337 256 77 13 chr20 58961015 58961171 -7706834 + LTR16C LTR ERVL 133 298 -193 249 253 3 0 chr20 58961691 58961760 -7706245 - MIR SINE MIR -65 143 86 1313 271 97 26 chr20 58961999 58962533 -7705472 + MLT1K LTR MaLR 17 588 0 1628 237 40 67 chr20 58962547 58963071 -7704934 - MLT1J LTR MaLR -1 510 1 275 359 20 7 chr20 58963154 58963314 -7704691 - MIR SINE MIR -63 145 37 274 325 111 8 chr20 58963522 58963648 -7704357 - MIR SINE MIR -118 144 6 282 341 23 16 chr20 58963855 58963984 -7704021 + MIR SINE MIR 113 242 -20 401 324 130 51 chr20 58964196 58964412 -7703593 - MIR SINE MIR -1 261 29 230 329 123 0 chr20 58965520 58965666 -7702339 + L2 LINE L2 2987 3150 -163 568 296 141 5 chr20 58966071 58966277 -7701728 - MIR SINE MIR -13 249 16 374 235 17 14 chr20 58966740 58967031 -7700974 + (TGGA)n Simple_repeat Simple_repeat 1 292 0 390 355 21 7 chr20 58967083 58967224 -7700781 + MIR SINE MIR 1 143 -119 208 51 26 26 chr20 58967225 58967264 -7700741 + (TAA)n Simple_repeat Simple_repeat 2 40 0 621 185 15 0 chr20 58967270 58967400 -7700605 - L1MB7 LINE L1 -229 5955 5824 503 308 20 7 chr20 58967437 58967583 -7700422 + MIR SINE MIR 7 154 -108 394 306 69 19 chr20 58967975 58968135 -7699870 + MER5B DNA MER1_type 5 172 -6 1756 208 51 41 chr20 58968453 58968722 -7699283 + L1MB7 LINE L1 5417 5682 -502 243 0 0 0 chr20 58968722 58968749 -7699256 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5986 53 0 3 chr20 58968749 58969466 -7698539 - L1PA6 LINE L1 -15 6139 5425 1756 208 51 41 chr20 58969466 58969729 -7698276 + L1MB7 LINE L1 5681 5955 -229 490 254 7 29 chr20 58970906 58971044 -7696961 + L2 LINE L2 3136 3270 -2 272 329 62 26 chr20 58971089 58971384 -7696621 + L2 LINE L2 2921 3313 0 984 312 85 23 chr20 58972049 58972503 -7695502 + MLT1K LTR MaLR 49 473 -115 2043 217 55 91 chr20 58972503 58972563 -7695442 - MLT1E2 LTR MaLR 0 626 565 2327 99 3 0 chr20 58972563 58972875 -7695130 + AluSp SINE Alu 1 313 0 2043 217 55 91 chr20 58972875 58973163 -7694842 - MLT1E2 LTR MaLR -61 565 309 2163 127 10 0 chr20 58973163 58973470 -7694535 - AluSx SINE Alu 0 312 3 2043 217 55 91 chr20 58973470 58973769 -7694236 - MLT1E2 LTR MaLR -317 309 1 984 312 85 23 chr20 58973769 58973798 -7694207 + MLT1K LTR MaLR 473 562 -26 2188 74 3 3 chr20 58974092 58974418 -7693587 - AluY SINE Alu 0 326 1 224 306 38 6 chr20 58974764 58974931 -7693074 - L2 LINE L2 -283 2989 2811 789 148 8 0 chr20 58975399 58975527 -7692478 - FLAM_C SINE Alu -4 129 1 1149 146 0 11 chr20 58976703 58976881 -7691124 + AluJo SINE Alu 121 296 -16 861 292 80 41 chr20 58976953 58977340 -7690665 + L2 LINE L2 2911 3312 -1 2075 102 3 72 chr20 58977458 58977793 -7690212 - AluSx SINE Alu 0 312 1 312 230 30 20 chr20 58977793 58977893 -7690112 - MER69 DNA AcHobo -6 2520 2420 235 236 14 14 chr20 58977982 58978054 -7689951 - L2 LINE L2 -309 2963 2892 453 248 8 62 chr20 58978761 58978890 -7689115 - MIR SINE MIR -118 144 23 594 225 0 76 chr20 58979547 58979667 -7688338 + L1MB7 LINE L1 6000 6110 -74 1489 148 48 68 chr20 58979667 58979833 -7688172 - AluJo SINE Alu -8 304 145 2192 100 0 3 chr20 58979833 58980123 -7687882 - AluSg SINE Alu -21 289 1 1489 148 48 68 chr20 58980123 58980266 -7687739 - AluJo SINE Alu -167 145 1 594 225 0 76 chr20 58980266 58980313 -7687692 + L1MB7 LINE L1 6110 6159 -25 838 253 122 44 chr20 58980322 58980538 -7687467 + L1MD3 LINE L1 7583 7837 -158 2216 107 0 3 chr20 58980538 58980837 -7687168 + AluSx SINE Alu 1 298 -14 838 253 122 44 chr20 58980837 58980964 -7687041 + L1MD3 LINE L1 7837 7953 -42 375 172 78 95 chr20 58981536 58981600 -7686405 + MER45A DNA AcHobo 32 95 -1486 1992 116 44 3 chr20 58981600 58981893 -7686112 - AluSx SINE Alu -7 305 1 375 172 78 95 chr20 58981893 58981944 -7686061 + MER45A DNA AcHobo 95 145 -33 380 362 20 13 chr20 58981966 58982118 -7685887 - MIR SINE MIR -1 261 109 218 235 161 37 chr20 58982150 58982231 -7685774 - MIR3 SINE MIR -37 171 81 535 338 114 29 chr20 58982740 58983413 -7684592 - L2 LINE L2 0 3272 2548 881 229 90 0 chr20 58983452 58983653 -7684352 + MER20 DNA MER1_type 1 219 0 259 323 138 8 chr20 58984894 58985024 -7682981 - MIR SINE MIR -11 251 105 544 262 47 115 chr20 58985801 58986055 -7681950 - MER113 DNA MER1_type? -159 362 141 1820 163 0 0 chr20 58986055 58986338 -7681667 - AluSx SINE Alu -2 310 28 544 262 47 115 chr20 58986338 58986465 -7681540 - MER113 DNA MER1_type? -380 141 7 235 189 57 0 chr20 58986600 58986653 -7681352 + CT-rich Low_complexity Low_complexity 2 57 0 376 261 51 8 chr20 58986814 58986937 -7681068 + MER5B DNA MER1_type 13 147 -42 330 190 21 106 chr20 58987041 58987183 -7680822 - MLT1L LTR MaLR -146 463 236 280 226 16 0 chr20 58987183 58987245 -7680760 - MLT1J LTR MaLR -337 174 112 1831 118 52 7 chr20 58987429 58987716 -7680289 + AluSx SINE Alu 1 300 -12 501 272 34 14 chr20 58987739 58987886 -7680119 + L2 LINE L2 3161 3310 -3 383 309 33 20 chr20 58987888 58988040 -7679965 - MIR SINE MIR -88 174 21 353 289 79 42 chr20 58988069 58988294 -7679711 + MIR SINE MIR 30 262 0 260 232 0 0 chr20 58988705 58988761 -7679244 + MER81 DNA DNA 18 73 -41 1194 127 0 42 chr20 58988872 58989061 -7678944 - AluJb SINE Alu -131 181 1 2109 122 3 0 chr20 58989153 58989448 -7678557 - AluSg SINE Alu -14 296 1 183 186 139 0 chr20 58989646 58989689 -7678316 + L2 LINE L2 3221 3269 -3 250 192 19 0 chr20 58989718 58989770 -7678235 + MIR SINE MIR 46 98 -164 290 221 248 0 chr20 58989782 58989895 -7678110 + L2 LINE L2 2473 2613 -701 191 309 0 0 chr20 58990110 58990165 -7677840 + L2 LINE L2 3181 3235 -37 209 250 0 42 chr20 58990270 58990342 -7677663 - MER5B DNA MER1_type -2 176 108 527 218 141 0 chr20 58990370 58990512 -7677493 - MER63A DNA MER1_type -37 173 12 326 250 0 14 chr20 58990522 58990594 -7677411 + MER5B DNA MER1_type 108 178 0 544 288 80 35 chr20 58990640 58990866 -7677139 - MIR SINE MIR 0 262 27 666 153 8 65 chr20 58991181 58991305 -7676700 - AluJb SINE Alu -131 181 65 427 328 0 0 chr20 58991409 58991583 -7676422 + C-rich Low_complexity Low_complexity 1 174 0 481 202 0 0 chr20 58991808 58991902 -7676103 + MER81 DNA DNA 18 111 -3 211 356 34 25 chr20 58992043 58992161 -7675844 + MIR SINE MIR 96 214 -48 551 206 154 33 chr20 58992277 58992491 -7675514 + L2 LINE L2 2829 3068 -245 258 367 18 0 chr20 58992664 58992773 -7675232 + MIR SINE MIR 97 207 -55 228 382 41 0 chr20 58994146 58994269 -7673736 + MIR SINE MIR 95 222 -40 703 147 13 51 chr20 58994713 58994869 -7673136 - MER45A DNA AcHobo -28 150 1 330 357 9 0 chr20 58996163 58996275 -7671730 - MIR3 SINE MIR -42 166 54 406 213 12 0 chr20 58996583 58996663 -7671342 - L2 LINE L2 -6 3307 3227 216 254 17 17 chr20 58996839 58996898 -7671107 + GA-rich Low_complexity Low_complexity 1 59 0 330 201 91 22 chr20 58996972 58997109 -7670896 - MIR SINE MIR -34 174 20 245 316 0 13 chr20 58997130 58997209 -7670796 + G-rich Low_complexity Low_complexity 1 78 0 477 50 0 0 chr20 58997249 58997309 -7670696 + (TCC)n Simple_repeat Simple_repeat 3 62 0 1418 83 93 0 chr20 58997309 58997502 -7670503 - AluSg/x SINE Alu -28 284 74 518 214 19 82 chr20 58998048 58998148 -7669857 + MIR SINE MIR 2 90 -172 1667 219 185 19 chr20 58998148 58998619 -7669386 - MLT1H LTR MaLR 0 549 1 518 214 19 82 chr20 58998619 58998677 -7669328 + MIR SINE MIR 90 150 -112 478 175 233 0 chr20 58998702 58998822 -7669183 - MER4C LTR ERV1 -18 447 300 265 314 0 0 chr20 58998992 58999062 -7668943 + MIR SINE MIR 172 241 -21 401 290 46 15 chr20 58999345 58999476 -7668529 - L2 LINE L2 -2 3270 3136 193 368 60 22 chr20 58999669 58999719 -7668286 - MIR SINE MIR -2 260 213 1761 154 27 0 chr20 58999719 59000012 -7667993 - AluJb SINE Alu -11 301 1 193 368 60 22 chr20 59000012 59000143 -7667862 - MIR SINE MIR -49 213 72 801 141 7 37 chr20 59000686 59000821 -7667184 - FLAM_C SINE Alu -2 131 1 224 188 16 0 chr20 59000854 59000918 -7667087 + (CA)n Simple_repeat Simple_repeat 1 65 0 292 354 0 0 chr20 59001166 59001262 -7666743 - MIR SINE MIR -134 128 33 244 296 139 26 chr20 59001237 59001352 -7666653 - MIR SINE MIR -18 244 117 * 206 357 115 0 chr20 59001373 59001555 -7666450 + L2 LINE L2 2879 3081 -232 569 278 121 43 chr20 59001575 59002059 -7665946 - MLT1E2 LTR MaLR -7 619 1 336 221 26 13 chr20 59002319 59002396 -7665609 - MER91C DNA MER1_type 0 140 63 450 279 150 0 chr20 59002482 59002622 -7665383 + MER5B DNA MER1_type 6 166 -12 526 335 57 16 chr20 59003909 59004103 -7663902 - MIR SINE MIR -15 247 46 238 286 0 0 chr20 59004342 59004398 -7663607 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 873 247 142 25 chr20 59004459 59004895 -7663110 - L2 LINE L2 -133 3180 2699 1111 141 0 0 chr20 59004915 59005078 -7662927 + AluSp SINE Alu 137 299 -14 298 73 0 0 chr20 59005273 59005314 -7662691 + FLAM SINE Alu 85 125 -8 2126 152 0 0 chr20 59005323 59005633 -7662372 + AluJb SINE Alu 1 310 -2 2370 85 0 0 chr20 59005640 59005923 -7662082 + AluSx SINE Alu 9 291 -21 598 170 18 0 chr20 59006168 59006280 -7661725 + FRAM SINE Alu 60 173 -3 225 303 56 7 chr20 59006294 59006436 -7661569 - L2 LINE L2 -823 2491 2343 1481 220 130 2 chr20 59006436 59006836 -7661169 - MLT1C LTR MaLR 0 467 17 288 313 75 9 chr20 59006852 59007066 -7660939 - L2 LINE L2 -967 2347 2120 423 312 20 94 chr20 59007571 59008016 -7659989 + L2 LINE L2 2840 3251 -21 485 264 144 40 chr20 59008443 59008693 -7659312 + L2 LINE L2 2877 3152 -161 216 0 0 0 chr20 59008701 59008725 -7659280 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 829 128 0 24 chr20 59008725 59008850 -7659155 - FLAM_C SINE Alu -21 122 1 330 239 46 18 chr20 59008918 59009027 -7658978 + MIR SINE MIR 24 135 -73 2608 150 35 8 chr20 59009375 59009850 -7658155 + LTR45B LTR ERV1 4 782 -1 273 229 64 9 chr20 59009930 59010039 -7657966 - MIR SINE MIR -110 152 38 404 301 98 0 chr20 59010095 59010228 -7657777 - MIR SINE MIR 0 262 117 1810 225 103 46 chr20 59010429 59011011 -7656994 - MLT1E3 LTR MaLR -9 615 1 1234 280 124 30 chr20 59011248 59011773 -7656232 - MLT1K LTR MaLR -10 578 5 440 261 42 0 chr20 59012295 59012437 -7655568 - MER45A DNA AcHobo 0 178 31 236 306 0 16 chr20 59013594 59013656 -7654349 + MER45A DNA AcHobo 8 68 -110 539 234 51 22 chr20 59013659 59013796 -7654209 + MER45A DNA AcHobo 38 178 0 358 153 0 0 chr20 59014308 59014367 -7653638 + MER6 DNA MER2_type 807 865 0 186 167 0 0 chr20 59014387 59014423 -7653582 + GA-rich Low_complexity Low_complexity 2 37 0 1706 213 83 27 chr20 59014868 59015314 -7652691 - L1MD3 LINE L1 -37 7958 7488 1115 261 90 20 chr20 59015526 59015916 -7652089 + MLT1C LTR MaLR 51 467 0 2229 106 3 3 chr20 59016302 59016603 -7651402 + AluSg SINE Alu 1 301 -9 322 253 20 40 chr20 59017066 59017165 -7650840 + MIR SINE MIR 86 182 -80 482 263 29 46 chr20 59018170 59018345 -7649660 - MIR SINE MIR -71 191 20 440 187 260 0 chr20 59018385 59018535 -7649470 - MER96B DNA MER1_type? 0 417 229 340 272 7 95 chr20 59019063 59019135 -7648870 - MIR SINE MIR -21 241 187 941 151 22 95 chr20 59019135 59019219 -7648786 + MER20 DNA MER1_type 1 90 -129 1916 153 0 14 chr20 59019219 59019513 -7648492 + AluJo SINE Alu 1 290 -22 941 151 22 95 chr20 59019513 59019660 -7648345 + MER20 DNA MER1_type 90 215 -4 340 272 7 95 chr20 59019660 59019734 -7648271 - MIR SINE MIR -75 187 108 213 135 27 0 chr20 59019873 59019910 -7648095 + L2 LINE L2 3257 3294 -19 * 227 182 23 0 chr20 59019878 59019922 -7648083 + MIR SINE MIR 217 261 -1 454 138 12 0 chr20 59020317 59020397 -7647608 - MER53 DNA DNA -86 103 23 * 491 95 0 0 chr20 59020327 59020401 -7647604 + MER53 DNA DNA 108 181 -8 2293 47 0 0 chr20 59020465 59020721 -7647284 - AluY SINE Alu -21 290 35 1057 293 72 3 chr20 59020728 59021191 -7646814 - L1ME3A LINE L1 -6 6164 5666 284 319 65 14 chr20 59021231 59021369 -7646636 + L2 LINE L2 3168 3312 -1 249 145 161 0 chr20 59022591 59022653 -7645352 + MIR SINE MIR 114 185 -77 184 125 83 0 chr20 59022808 59022856 -7645149 + CT-rich Low_complexity Low_complexity 1 52 0 207 219 24 12 chr20 59023235 59023317 -7644688 + CT-rich Low_complexity Low_complexity 5 87 0 318 268 146 0 chr20 59024466 59024548 -7643457 + L2 LINE L2 3212 3305 -8 1478 178 63 21 chr20 59024564 59024796 -7643209 + AluJo SINE Alu 1 249 -63 2237 106 30 43 chr20 59024796 59025165 -7642840 + THE1B LTR MaLR 1 364 0 1478 178 63 21 chr20 59025165 59025218 -7642787 + AluJo SINE Alu 249 298 -14 443 241 80 29 chr20 59025729 59025866 -7642139 + MER5B DNA MER1_type 29 172 -6 535 317 16 0 chr20 59026033 59026219 -7641786 - Charlie8 DNA MER1_type -2151 266 78 465 275 33 50 chr20 59026301 59026406 -7641599 - MIR SINE MIR -69 193 91 1803 192 85 41 chr20 59026406 59026890 -7641115 + MLT1D LTR MaLR 1 505 0 465 275 33 50 chr20 59026890 59026966 -7641039 - MIR SINE MIR -171 91 15 1132 207 166 68 chr20 59027552 59027992 -7640013 - MLT1J LTR MaLR -2 509 27 339 344 23 8 chr20 59028066 59028194 -7639811 + MIR3 SINE MIR 76 205 -3 728 203 84 0 chr20 59028460 59028658 -7639347 - MLT1D LTR MaLR -7 498 356 621 252 13 84 chr20 59029209 59029435 -7638570 + MIR SINE MIR 22 231 -31 2032 96 7 4 chr20 59029611 59029881 -7638124 - AluSx SINE Alu -1 311 41 187 312 0 13 chr20 59030110 59030187 -7637818 - MIR SINE MIR -1 261 186 181 229 16 49 chr20 59031000 59031061 -7636944 - MIR SINE MIR -1 261 203 1355 86 0 6 chr20 59031076 59031251 -7636754 + AluSg/x SINE Alu 131 304 -8 234 184 61 0 chr20 59031263 59031312 -7636693 - MIR SINE MIR -93 169 118 216 184 0 0 chr20 59031658 59031696 -7636309 + (TGAA)n Simple_repeat Simple_repeat 3 40 0 312 253 53 11 chr20 59031847 59031942 -7636063 + MIR SINE MIR 157 255 -7 1359 117 0 0 chr20 59031958 59032138 -7635867 - AluSg/x SINE Alu -7 305 126 2331 118 0 0 chr20 59032138 59032451 -7635554 - AluSq SINE Alu 0 313 1 351 236 126 8 chr20 59032488 59032615 -7635390 - MER113 DNA MER1_type? -316 205 64 656 300 45 16 chr20 59033848 59034095 -7633910 - MER63 DNA MER1_type -5 1056 803 323 102 80 0 chr20 59034280 59034368 -7633637 + GA-rich Low_complexity Low_complexity 5 99 0 223 289 100 22 chr20 59034470 59034560 -7633445 - MIR SINE MIR -76 132 36 342 319 28 0 chr20 59034728 59034872 -7633133 - MER113 DNA MER1_type? -41 480 333 236 242 111 0 chr20 59034943 59035042 -7632963 - MER113 DNA MER1_type? -299 222 113 2183 122 8 8 chr20 59035378 59035732 -7632273 + THE1A LTR MaLR 1 354 -1 1428 175 125 38 chr20 59036267 59036622 -7631383 + L1MB2 LINE L1 5737 6132 -39 2333 76 0 57 chr20 59036622 59036939 -7631066 - AluY SINE Alu -10 301 3 1428 175 125 38 chr20 59036939 59036983 -7631022 + L1MB2 LINE L1 6132 6171 0 275 193 123 25 chr20 59037358 59037480 -7630525 + L1ME1 LINE L1 2402 2535 -3891 3294 170 17 11 chr20 59037611 59038247 -7629758 - L1 LINE L1 -3361 2785 2146 * 5944 143 13 4 chr20 59038246 59039723 -7628282 + L1PB2 LINE L1 4663 6148 -3 1394 257 31 0 chr20 59039725 59040106 -7627899 + L1ME1 LINE L1 4275 4667 -1759 27 0 0 0 chr20 59040106 59040133 -7627872 + AT_rich Low_complexity Low_complexity 1 27 0 311 169 0 13 chr20 59040587 59040664 -7627341 + CT-rich Low_complexity Low_complexity 2 77 0 2886 230 58 43 chr20 59041310 59041773 -7626232 + L1ME1 LINE L1 4654 5109 -1337 1950 130 14 3 chr20 59041773 59042065 -7625940 - AluSx SINE Alu -14 298 4 2886 230 58 43 chr20 59042065 59042340 -7625665 + L1ME1 LINE L1 5109 5379 -1067 2710 62 0 0 chr20 59042340 59042648 -7625357 + AluY SINE Alu 1 308 -3 2886 230 58 43 chr20 59042648 59043012 -7624993 + L1ME1 LINE L1 5379 5736 -710 2363 79 0 29 chr20 59043012 59043366 -7624639 + AluY SINE Alu 1 311 0 2413 102 0 0 chr20 59043370 59043673 -7624332 + AluSx SINE Alu 1 303 -9 2886 230 58 43 chr20 59043673 59044202 -7623803 + L1ME1 LINE L1 5738 6296 -150 2473 224 101 28 chr20 59044202 59044925 -7623080 - LTR39 LTR ERV1 0 783 8 559 211 74 1 chr20 59044935 59045084 -7622921 + L1ME1 LINE L1 6312 6612 -2 405 178 11 44 chr20 59045834 59045924 -7622081 + AluJb SINE Alu 207 293 -19 857 161 18 42 chr20 59045989 59046157 -7621848 - AluJo SINE Alu -119 193 30 1774 165 0 60 chr20 59046176 59046341 -7621664 - AluJb SINE Alu -16 296 157 441 0 0 0 chr20 59046341 59046390 -7621615 + (TG)n Simple_repeat Simple_repeat 2 50 0 1774 165 0 60 chr20 59046390 59046539 -7621466 - AluJb SINE Alu -155 157 1 2223 113 0 0 chr20 59047801 59048092 -7619913 - AluSx SINE Alu -21 291 1 3419 166 13 30 chr20 59048190 59048210 -7619795 - L1MB3 LINE L1 -4 6179 6160 2698 124 24 0 chr20 59048210 59048628 -7619377 + MSTA LTR MaLR 1 428 0 3419 166 13 30 chr20 59048628 59049299 -7618706 - L1MB3 LINE L1 -23 6160 5500 897 172 21 31 chr20 59051057 59051249 -7616756 - MER20 DNA MER1_type 0 219 30 3318 114 37 10 chr20 59051638 59052148 -7615857 - MER1A DNA MER1_type -5 524 1 21 0 0 0 chr20 59052263 59052284 -7615721 + AT_rich Low_complexity Low_complexity 1 21 0 1626 128 113 11 chr20 59052362 59052636 -7615369 + AluSq SINE Alu 1 302 -11 186 74 56 37 chr20 59053005 59053059 -7614946 + A-rich Low_complexity Low_complexity 5 59 0 195 243 29 57 chr20 59053282 59053352 -7614653 - L2 LINE L2 0 3272 3205 332 127 32 0 chr20 59053662 59053725 -7614280 + ORSL DNA AcHobo 51 115 -160 703 220 31 6 chr20 59054487 59054646 -7613359 + MER53 DNA DNA 27 189 0 671 289 82 28 chr20 59055045 59055336 -7612669 + MLT1C LTR MaLR 146 452 -15 2061 153 177 49 chr20 59055816 59055967 -7612038 + LTR39 LTR ERV1 1 131 -652 664 161 71 83 chr20 59055967 59056135 -7611870 + FRAM SINE Alu 1 166 0 2061 153 177 49 chr20 59056136 59056193 -7611812 + LTR39 LTR ERV1 131 179 -604 2208 72 0 0 chr20 59056193 59056455 -7611550 - AluY SINE Alu -49 262 1 2170 107 0 10 chr20 59056464 59056755 -7611250 - AluSx SINE Alu -18 294 7 2061 153 177 49 chr20 59056755 59057221 -7610784 + LTR39 LTR ERV1 185 783 0 2457 49 0 3 chr20 59057426 59057735 -7610270 - AluY SINE Alu 0 308 1 637 255 13 13 chr20 59058236 59058393 -7609612 + MER58A DNA MER1_type 3 159 0 500 182 112 94 chr20 59058393 59058483 -7609522 - L1M LINE L1 -748 5426 5330 2222 117 7 0 chr20 59058483 59058781 -7609224 - AluSg SINE Alu -10 300 1 500 182 112 94 chr20 59058781 59058860 -7609145 - L1M LINE L1 -844 5330 5254 2122 214 145 2 chr20 59059254 59059374 -7608631 + MLT1F1 LTR MaLR 1 102 -465 1987 148 0 20 chr20 59059374 59059677 -7608328 - AluSx SINE Alu -15 297 1 2122 214 145 2 chr20 59059677 59060052 -7607953 + MLT1F1 LTR MaLR 102 567 0 1586 170 24 28 chr20 59060108 59060396 -7607609 - AluJo SINE Alu -5 307 21 1950 126 83 0 chr20 59061464 59061742 -7606263 - AluJo SINE Alu -11 301 1 591 208 79 75 chr20 59062373 59062614 -7605391 - Charlie1a DNA MER1_type -4 1451 1210 386 198 23 0 chr20 59062659 59062745 -7605260 - MER53 DNA DNA -101 88 1 2406 70 24 0 chr20 59062761 59063059 -7604946 + AluY SINE Alu 1 305 -6 1752 189 43 28 chr20 59063061 59063233 -7604772 - Charlie1a DNA MER1_type -1612 1149 981 1652 189 28 3 chr20 59063233 59063519 -7604486 - AluJo SINE Alu -19 293 1 1752 189 43 28 chr20 59063519 59063743 -7604262 - Charlie1a DNA MER1_type -1780 981 747 2390 95 0 3 chr20 59063776 59064072 -7603933 - AluSx SINE Alu -17 295 1 1534 264 71 13 chr20 59064073 59064611 -7603394 - Charlie1a DNA MER1_type -886 569 1 839 229 50 46 chr20 59065006 59065224 -7602781 - MER20 DNA MER1_type 0 219 1 295 271 74 33 chr20 59066371 59066493 -7601512 + MIR SINE MIR 19 145 -63 2200 141 0 0 chr20 59067312 59067624 -7600381 - AluJb SINE Alu 0 312 1 1883 175 3 0 chr20 59068439 59068742 -7599263 + AluJb SINE Alu 5 308 -4 2172 109 27 3 chr20 59069463 59069757 -7598248 - AluSx SINE Alu -11 301 1 928 224 9 24 chr20 59072026 59072236 -7595769 - MER3 DNA MER1_type -2 207 1 451 256 126 5 chr20 59072379 59072578 -7595427 + L1MEd LINE L1 596 818 -5301 934 204 16 56 chr20 59072595 59072845 -7595160 + L1MB5 LINE L1 38 277 -6265 447 154 24 49 chr20 59072822 59072945 -7595060 + L1MB5 LINE L1 4359 4478 -2166 * 1878 233 26 15 chr20 59072946 59073406 -7594599 + MLT1C LTR MaLR 3 467 0 3466 210 10 20 chr20 59073409 59074213 -7593792 + L1MB5 LINE L1 5809 6604 -68 231 289 112 37 chr20 59074427 59074614 -7593391 - Charlie8 DNA MER1_type -2200 217 17 204 213 21 0 chr20 59077033 59077080 -7590925 + (CCCCG)n Simple_repeat Simple_repeat 1 48 0 197 62 0 31 chr20 59077419 59077451 -7590554 + (AGGGGG)n Simple_repeat Simple_repeat 2 32 0 214 309 0 40 chr20 59077712 59077864 -7590141 + GA-rich Low_complexity Low_complexity 1 146 0 * 239 302 0 26 chr20 59077815 59077931 -7590074 + G-rich Low_complexity Low_complexity 4 116 0 208 306 0 49 chr20 59077954 59078098 -7589907 + G-rich Low_complexity Low_complexity 5 141 0 300 296 0 50 chr20 59078182 59078394 -7589611 + G-rich Low_complexity Low_complexity 1 201 0 288 231 26 13 chr20 59079714 59079792 -7588213 + L1MB5 LINE L1 6586 6664 -8 1236 229 50 31 chr20 59081667 59082130 -7585875 + MLT1B LTR MaLR 14 390 0 337 263 85 0 chr20 59082810 59082928 -7585077 - MIR SINE MIR -44 218 91 868 159 0 0 chr20 59082928 59083060 -7584945 + FLAM_C SINE Alu 1 132 -1 284 190 30 40 chr20 59083181 59083281 -7584724 + (TA)n Simple_repeat Simple_repeat 1 99 0 303 242 162 10 chr20 59083288 59083387 -7584618 + L2 LINE L2 3200 3313 0 2478 99 0 6 chr20 59083694 59084008 -7583997 - AluSx SINE Alu 0 312 1 250 308 145 0 chr20 59084881 59084998 -7583007 + MIR SINE MIR 81 214 -48 1626 135 155 25 chr20 59085199 59085554 -7582451 + MLT1D LTR MaLR 105 505 0 1225 258 119 21 chr20 59085564 59086083 -7581922 + L2 LINE L2 2017 2586 -728 572 319 58 0 chr20 59086185 59086426 -7581579 + L2 LINE L2 2820 3074 -239 827 133 0 0 chr20 59086430 59086543 -7581462 + AluJb SINE Alu 188 300 -12 1753 174 13 22 chr20 59086599 59086910 -7581095 + AluJb SINE Alu 1 308 -4 350 292 73 0 chr20 59086994 59087090 -7580915 + L2 LINE L2 3210 3312 -1 4112 103 28 2 chr20 59088152 59088717 -7579288 + LTR19B LTR ERV1 1 580 0 1115 218 85 51 chr20 59088844 59089197 -7578808 - L1MD2 LINE L1 0 6359 5995 546 226 0 0 chr20 59089924 59090061 -7577944 + CT-rich Low_complexity Low_complexity 2 138 0 195 304 51 57 chr20 59090269 59090368 -7577637 - MIR SINE MIR -109 99 19 398 257 40 20 chr20 59090649 59090797 -7577208 - LTR16C LTR ERVL -1 490 340 345 158 0 0 chr20 59091365 59091447 -7576558 + (CA)n Simple_repeat Simple_repeat 2 83 0 338 291 31 31 chr20 59091609 59091736 -7576269 - L2 LINE L2 -471 2843 2717 2215 119 3 0 chr20 59091756 59092058 -7575947 - AluSx SINE Alu -9 303 1 281 287 232 24 chr20 59092773 59093027 -7574978 + L2 LINE L2 2968 3274 -39 422 225 123 4 chr20 59094366 59094506 -7573499 + MIR SINE MIR 56 211 -51 313 291 115 81 chr20 59094553 59094787 -7573218 + MIR SINE MIR 21 262 0 771 193 125 21 chr20 59094921 59095113 -7572892 - MER20 DNA MER1_type -1 218 7 226 288 50 12 chr20 59095547 59095627 -7572378 + MIR SINE MIR 72 154 -108 375 246 34 34 chr20 59096749 59096867 -7571138 + MIR3 SINE MIR 91 208 0 380 239 110 9 chr20 59098003 59098112 -7569893 - MIR SINE MIR -70 192 73 425 278 269 30 chr20 59100593 59100928 -7567077 - L2 LINE L2 0 3313 2899 213 121 0 0 chr20 59101916 59101949 -7566056 + (TC)n Simple_repeat Simple_repeat 2 34 0 2679 55 0 3 chr20 59102669 59102980 -7565025 + AluY SINE Alu 1 310 -1 275 268 12 49 chr20 59103939 59104021 -7563984 - L2 LINE L2 -11 3302 3224 636 244 18 76 chr20 59104153 59104378 -7563627 - MIR SINE MIR -13 249 38 854 153 0 30 chr20 59104465 59104596 -7563409 - FLAM_C SINE Alu -6 127 1 247 309 222 0 chr20 59106562 59106688 -7561317 - MIR3 SINE MIR -28 180 27 358 250 10 10 chr20 59106707 59106807 -7561198 - MLT1L LTR MaLR 0 615 516 768 158 59 7 chr20 59107541 59107693 -7560312 - L1MB5 LINE L1 0 6174 6015 2185 104 0 3 chr20 59108560 59108859 -7559146 - AluSx SINE Alu -14 298 1 727 173 152 21 chr20 59109621 59109812 -7558193 - MER45C DNA AcHobo -8 945 730 471 285 79 30 chr20 59109811 59110097 -7557908 - MER45C DNA AcHobo -570 383 44 * 260 247 0 146 chr20 59110310 59110468 -7557537 + MIR SINE MIR 118 252 -10 401 292 181 6 chr20 59112461 59112632 -7555373 + MIR SINE MIR 31 231 -31 322 268 124 10 chr20 59112623 59112720 -7555285 - L2 LINE L2 -10 3303 3196 * 222 37 0 0 chr20 59117411 59117438 -7550567 + (GA)n Simple_repeat Simple_repeat 1 27 0 422 196 10 0 chr20 59118329 59118431 -7549574 + (TG)n Simple_repeat Simple_repeat 2 104 0 198 313 0 0 chr20 59119112 59119160 -7548845 - L2 LINE L2 -9 3263 3216 279 264 0 25 chr20 59119460 59119552 -7548453 - MIR SINE MIR -66 196 109 478 351 20 5 chr20 59121142 59121344 -7546661 + MIR SINE MIR 23 227 -35 600 289 8 17 chr20 59121637 59121872 -7546133 + L1ME4a LINE L1 5617 5849 -272 892 245 3 54 chr20 59123245 59123539 -7544466 + L1MB7 LINE L1 5854 6132 -52 246 32 0 0 chr20 59123546 59123577 -7544428 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2403 49 0 0 chr20 59123579 59123865 -7544140 - AluY SINE Alu -25 286 1 563 259 93 5 chr20 59123946 59124151 -7543854 + MER113 DNA MER1_type? 264 486 -35 186 366 75 0 chr20 59124184 59124277 -7543728 - MIR SINE MIR -80 128 29 254 190 69 0 chr20 59124533 59124591 -7543414 + MIR SINE MIR 84 145 -63 229 297 0 0 chr20 59125936 59126000 -7542005 - MIR SINE MIR -2 260 197 567 158 0 0 chr20 59127228 59127355 -7540650 + CT-rich Low_complexity Low_complexity 1 127 0 244 226 43 35 chr20 59127451 59127566 -7540439 + (TCCA)n Simple_repeat Simple_repeat 3 118 0 356 287 6 0 chr20 59129111 59129285 -7538720 + (TCCA)n Simple_repeat Simple_repeat 1 175 0 367 216 17 0 chr20 59129304 59129420 -7538585 + (TGGA)n Simple_repeat Simple_repeat 1 118 0 227 226 47 0 chr20 59129434 59129540 -7538465 + (TCCA)n Simple_repeat Simple_repeat 3 113 0 181 351 218 0 chr20 59129596 59129770 -7538235 - MIR SINE MIR -1 261 50 400 312 35 50 chr20 59130237 59130439 -7537566 - MIR SINE MIR -19 243 45 314 279 17 0 chr20 59130472 59130573 -7537432 + MIR SINE MIR 30 134 -74 218 296 25 12 chr20 59131242 59131323 -7536682 - MIR SINE MIR -168 94 13 650 245 41 31 chr20 59132639 59132835 -7535170 - L1ME2 LINE L1 -9 6155 5958 686 268 71 15 chr20 59132933 59133239 -7534766 - L1ME2 LINE L1 -403 5763 5488 379 317 134 0 chr20 59133486 59133688 -7534317 + L2 LINE L2 2736 2964 -350 334 286 2 2 chr20 59133796 59133906 -7534099 - MIR SINE MIR -62 146 56 219 333 57 19 chr20 59135061 59135166 -7532839 - MER5A DNA MER1_type -1 188 80 953 251 9 9 chr20 59135234 59135453 -7532552 - MER20 DNA MER1_type 0 219 1 355 299 67 0 chr20 59135533 59135672 -7532333 - MIR SINE MIR -61 147 27 475 333 44 40 chr20 59135682 59135979 -7532026 + L2 LINE L2 2992 3289 -24 1085 292 30 10 chr20 59136003 59136444 -7531561 + MLT1J LTR MaLR 4 504 -7 396 0 0 0 chr20 59136757 59136801 -7531204 + (TCCA)n Simple_repeat Simple_repeat 4 47 0 300 330 144 30 chr20 59136804 59137201 -7530804 - L2 LINE L2 -1 3312 2871 710 253 122 68 chr20 59137363 59137758 -7530247 + LTR16C LTR ERVL 76 491 0 681 262 49 16 chr20 59137762 59137945 -7530060 - MIR SINE MIR -65 197 9 362 264 208 19 chr20 59138008 59138167 -7529838 + MER5A DNA MER1_type 1 189 0 439 290 42 31 chr20 59138271 59138464 -7529541 - L2 LINE L2 -750 2564 2370 361 279 62 16 chr20 59139477 59139606 -7528399 - L2 LINE L2 0 3272 3138 255 329 49 0 chr20 59140507 59140589 -7527416 - MIR SINE MIR 0 262 177 280 325 0 0 chr20 59140999 59141082 -7526923 + MIR SINE MIR 156 238 -24 270 111 22 0 chr20 59141109 59141154 -7526851 - MIR SINE MIR -118 144 99 211 368 187 13 chr20 59141309 59141464 -7526541 - MIR SINE MIR -79 183 2 196 300 14 29 chr20 59141609 59141679 -7526326 + MIR SINE MIR 22 90 -172 376 314 64 6 chr20 59142825 59142997 -7525008 - MIR SINE MIR -16 246 65 396 318 69 37 chr20 59143527 59143964 -7524041 - L2 LINE L2 -339 2975 2525 209 256 179 0 chr20 59144589 59144667 -7523338 - MIR SINE MIR -151 111 20 295 306 204 5 chr20 59145132 59145318 -7522687 - MIR SINE MIR -8 254 32 418 343 25 25 chr20 59146014 59146250 -7521755 - L2 LINE L2 -1 3312 3077 203 374 40 0 chr20 59147393 59147492 -7520513 + MIR SINE MIR 160 262 0 352 306 81 0 chr20 59147770 59147894 -7520111 - MIR3 SINE MIR -44 164 31 456 299 62 0 chr20 59148369 59148513 -7519492 - MIR SINE MIR -109 153 1 632 220 40 0 chr20 59148698 59148848 -7519157 + MIR SINE MIR 47 202 -60 303 295 70 32 chr20 59149626 59149811 -7518194 - MIR3 SINE MIR -63 145 6 830 184 25 10 chr20 59149984 59150180 -7517825 + MLT1D LTR MaLR 19 217 -288 204 307 15 88 chr20 59150596 59150733 -7517272 + MIR SINE MIR 8 134 -128 351 280 37 19 chr20 59151022 59151129 -7516876 + MIR SINE MIR 53 161 -101 1720 145 52 0 chr20 59151596 59151906 -7516099 + MER2 DNA MER2_type 1 326 -19 401 329 18 0 chr20 59152126 59152290 -7515715 + MLT1K LTR MaLR 405 571 -17 331 373 59 45 chr20 59153167 59153607 -7514398 + L2 LINE L2 2807 3252 -20 919 273 166 11 chr20 59153752 59154192 -7513813 + MLT1K LTR MaLR 73 580 -8 309 296 15 15 chr20 59154397 59154529 -7513476 - MLT1K LTR MaLR -28 560 429 231 188 0 0 chr20 59154829 59154877 -7513128 + (TG)n Simple_repeat Simple_repeat 1 48 0 216 284 0 14 chr20 59154940 59155014 -7512991 + (CACCC)n Simple_repeat Simple_repeat 5 77 0 2176 141 36 33 chr20 59155099 59155462 -7512543 + THE1B LTR MaLR 1 364 0 1494 216 18 68 chr20 59155708 59156035 -7511970 - MLT1A1 LTR MaLR 0 365 58 2285 76 0 19 chr20 59156035 59156350 -7511655 - AluY SINE Alu 0 311 3 1494 216 18 68 chr20 59156350 59156406 -7511599 - MLT1A1 LTR MaLR -307 58 1 810 269 6 0 chr20 59156968 59157143 -7510862 + MER45A DNA AcHobo 3 178 0 342 0 0 0 chr20 59157285 59157323 -7510682 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 13735 134 21 43 chr20 59157406 59157832 -7510173 + Tigger1 DNA MER2_type 8 442 -1976 2041 134 3 0 chr20 59157832 59158142 -7509863 + AluSp SINE Alu 1 311 0 13735 134 21 43 chr20 59158142 59160178 -7507827 + Tigger1 DNA MER2_type 442 2417 -1 2456 72 0 3 chr20 59160307 59160599 -7507406 - AluY SINE Alu -18 293 3 229 267 105 35 chr20 59162044 59162192 -7505813 - MIR3 SINE MIR -50 158 20 224 37 0 0 chr20 59163348 59163375 -7504630 - MIR SINE MIR -63 145 119 2032 129 9 47 chr20 59163419 59163736 -7504269 - AluSx SINE Alu -7 305 1 30 45 0 0 chr20 59164509 59164553 -7503452 + AT_rich Low_complexity Low_complexity 1 44 0 188 280 130 40 chr20 59164623 59164723 -7503282 - MIR3 SINE MIR -15 193 85 187 138 0 0 chr20 59164805 59164834 -7503171 + MIR SINE MIR 216 244 -18 234 259 59 35 chr20 59164860 59164945 -7503060 - HsTC2 DNA Tc2 -1811 87 1 37 39 0 0 chr20 59165070 59165121 -7502884 + AT_rich Low_complexity Low_complexity 1 51 0 240 252 173 39 chr20 59165556 59165683 -7502322 - MER5A DNA MER1_type 0 189 46 314 222 100 113 chr20 59166128 59166207 -7501798 + ORSL DNA AcHobo 40 118 -157 180 0 0 0 chr20 59166207 59166227 -7501778 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 2264 83 14 0 chr20 59166233 59166510 -7501495 - AluSq SINE Alu -32 281 1 314 222 100 113 chr20 59166510 59166662 -7501343 + ORSL DNA AcHobo 123 275 0 356 245 97 9 chr20 59167244 59167375 -7500630 + MIR SINE MIR 20 154 -63 215 310 294 5 chr20 59167862 59168046 -7499959 + MIR SINE MIR 14 250 -12 301 271 113 30 chr20 59168227 59168360 -7499645 - MIR SINE MIR -79 183 40 531 265 224 35 chr20 59169388 59169711 -7498294 + L2 LINE L2 2865 3125 -147 270 95 0 0 chr20 59169711 59169753 -7498252 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 1527 197 27 10 chr20 59169754 59170049 -7497956 + AluJo SINE Alu 1 300 -12 531 265 224 35 chr20 59170049 59170066 -7497939 + L2 LINE L2 3124 3272 0 2036 139 3 3 chr20 59170758 59171060 -7496945 - AluSq SINE Alu -11 302 1 585 201 151 7 chr20 59171437 59171576 -7496429 + MIR SINE MIR 30 188 -74 353 330 127 12 chr20 59171815 59171988 -7496017 + MIR SINE MIR 52 244 -18 2200 131 3 0 chr20 59172010 59172315 -7495690 - AluSx SINE Alu -6 306 1 1992 132 13 7 chr20 59173053 59173356 -7494649 - AluJb SINE Alu -7 305 1 346 285 95 0 chr20 59173552 59173689 -7494316 - MIR SINE MIR -49 213 64 812 249 21 0 chr20 59173837 59174026 -7493979 + MIR SINE MIR 8 200 -62 266 268 51 61 chr20 59174144 59174308 -7493697 - MIR SINE MIR -69 139 17 344 212 93 25 chr20 59174498 59174616 -7493389 + MER5B DNA MER1_type 50 175 -3 222 261 0 0 chr20 59175597 59175643 -7492362 + MIR SINE MIR 107 152 -110 1163 236 128 30 chr20 59175957 59176385 -7491620 - MLT1J LTR MaLR -39 472 3 599 267 58 15 chr20 59177080 59177286 -7490719 + MIR SINE MIR 34 248 -14 1597 225 72 11 chr20 59177446 59177819 -7490186 - MSTD LTR MaLR 0 396 1 656 302 73 25 chr20 59178774 59179019 -7488986 - MIR SINE MIR 0 262 6 269 92 158 40 chr20 59179261 59179337 -7488668 + Charlie5 DNA MER1_type 2405 2489 -123 1099 277 42 8 chr20 59179490 59179844 -7488161 - LTR16C LTR ERVL 0 491 126 240 294 101 9 chr20 59179958 59180067 -7487938 - MIR SINE MIR -113 149 31 5039 127 112 83 chr20 59180799 59182280 -7485725 + pTR5 LTR ERV1 743 2438 0 1086 300 85 20 chr20 59182351 59182895 -7485110 + MLT1K LTR MaLR 10 588 0 407 298 66 13 chr20 59183117 59183345 -7484660 + L1ME4a LINE L1 5645 5884 -237 1326 240 56 17 chr20 59183497 59183675 -7484330 - MLT1A2 LTR MaLR -2 372 202 306 0 0 0 chr20 59183675 59183709 -7484296 + (GA)n Simple_repeat Simple_repeat 1 34 0 1326 240 56 17 chr20 59183709 59183888 -7484117 - MLT1A2 LTR MaLR -172 202 1 1724 181 80 75 chr20 59184223 59184806 -7483199 - LTR49 LTR ERV1 -10 643 1 305 284 11 0 chr20 59184807 59184902 -7483103 + L1MB7 LINE L1 2639 2734 -3412 * 4324 199 15 13 chr20 59184900 59186005 -7482000 + L1MB7 LINE L1 5080 6184 0 1718 146 4 19 chr20 59186024 59186292 -7481713 + AluJo SINE Alu 1 264 -48 706 172 9 0 chr20 59186293 59186409 -7481596 - Ricksha DNA DNA -361 2493 2377 188 67 33 0 chr20 59186419 59186449 -7481556 + (GAAA)n Simple_repeat Simple_repeat 3 33 0 4073 219 76 87 chr20 59186461 59188466 -7479539 + L1MC3 LINE L1 21 2003 -4423 829 196 0 6 chr20 59188524 59188682 -7479323 + MLT1B LTR MaLR 2 158 -216 293 80 0 20 chr20 59188691 59188741 -7479264 + (TC)n Simple_repeat Simple_repeat 2 50 0 905 250 0 5 chr20 59188768 59188972 -7479033 + MLT1B LTR MaLR 182 384 -6 2225 234 36 18 chr20 59188987 59189941 -7478064 + L1MC3 LINE L1 2125 3094 -3332 639 175 16 0 chr20 59189978 59190104 -7477901 + Ricksha DNA DNA 2 129 -3117 606 133 35 18 chr20 59190107 59190220 -7477785 + Ricksha DNA DNA 239 353 -1693 227 155 24 107 chr20 59190220 59190304 -7477701 + MLT2B3 LTR ERVL 9 85 -469 5663 165 38 23 chr20 59190304 59190691 -7477314 + Ricksha DNA DNA 2060 2440 -806 1865 165 19 13 chr20 59190691 59191000 -7477005 - AluJo SINE Alu 0 312 2 5663 165 38 23 chr20 59191000 59191801 -7476204 + Ricksha DNA DNA 2440 3233 -13 3032 240 61 22 chr20 59191809 59192269 -7475736 + L1MC3 LINE L1 3143 3584 -2842 2039 160 0 6 chr20 59192269 59192582 -7475423 + AluSx SINE Alu 2 312 0 3032 240 61 22 chr20 59192582 59193172 -7474833 + L1MC3 LINE L1 3584 4234 -2192 1299 195 15 11 chr20 59193265 59193527 -7474478 + MLT1A1 LTR MaLR 103 365 0 6990 192 20 49 chr20 59193527 59195650 -7472355 + L1MC3 LINE L1 4255 4964 -1462 2562 184 12 40 chr20 59195650 59196150 -7471855 + MER66B LTR ERV1 1 486 0 6990 192 20 49 chr20 59196150 59196850 -7471155 + L1MC3 LINE L1 4964 5683 -743 * 9785 92 41 6 chr20 59196848 59198248 -7469757 + THE1B-int LTR MaLR 131 1580 0 2263 148 28 14 chr20 59198248 59198607 -7469398 + THE1B LTR MaLR 1 364 0 1068 237 23 0 chr20 59198608 59198827 -7469178 - MER58A DNA MER1_type 0 224 1 556 149 0 43 chr20 59199650 59199744 -7468261 + FRAM SINE Alu 65 154 -22 318 219 0 14 chr20 59199754 59199827 -7468178 + Tigger2 DNA MER2_type 2637 2708 -10 455 209 45 85 chr20 59200048 59200249 -7467756 + LTR16A1 LTR ERVL 265 457 0 296 300 30 0 chr20 59200254 59200354 -7467651 + MER103 DNA DNA 55 157 -9 26 0 0 0 chr20 59203818 59203844 -7464161 + AT_rich Low_complexity Low_complexity 1 26 0 228 67 0 0 chr20 59204015 59204045 -7463960 + (T)n Simple_repeat Simple_repeat 1 30 0 306 283 62 48 chr20 59205633 59205778 -7462227 + MIR SINE MIR 60 206 -56 586 212 55 0 chr20 59206398 59206544 -7461461 - L1MA10 LINE L1 -3 6331 6178 201 329 59 0 chr20 59206941 59207026 -7460979 - MER5A DNA MER1_type -73 116 27 253 325 68 42 chr20 59207341 59207532 -7460473 + L2 LINE L2 2911 3106 -166 480 306 11 11 chr20 59207976 59208159 -7459846 - MER58A DNA MER1_type 0 224 42 192 316 0 0 chr20 59208830 59208887 -7459118 - MIR SINE MIR -108 100 44 273 256 217 0 chr20 59209522 59209651 -7458354 + MIR3 SINE MIR 20 176 -32 180 0 0 0 chr20 59210704 59210724 -7457281 + (TGGA)n Simple_repeat Simple_repeat 1 20 0 266 333 31 31 chr20 59210786 59210933 -7457072 - MIR SINE MIR -63 145 19 222 238 150 0 chr20 59211353 59211433 -7456572 + L2 LINE L2 3179 3270 -43 216 97 0 0 chr20 59211813 59211844 -7456161 + (CACCAT)n Simple_repeat Simple_repeat 5 35 0 236 285 22 22 chr20 59212492 59212671 -7455334 + (CA)n Simple_repeat Simple_repeat 2 180 0 248 264 35 11 chr20 59212801 59212975 -7455030 + (CA)n Simple_repeat Simple_repeat 2 179 0 297 291 11 11 chr20 59212997 59213172 -7454833 + (CA)n Simple_repeat Simple_repeat 2 176 0 766 202 45 0 chr20 59214279 59214457 -7453548 + MER20 DNA MER1_type 1 186 -33 260 203 34 0 chr20 59214501 59214560 -7453445 - MIR SINE MIR -108 154 94 361 262 107 0 chr20 59217380 59217483 -7450522 - MIR SINE MIR -101 161 48 181 301 44 80 chr20 59217577 59217690 -7450315 + MIR SINE MIR 33 141 -67 478 340 6 6 chr20 59218501 59218660 -7449345 - MIR SINE MIR -23 239 81 284 340 19 0 chr20 59219312 59219418 -7448587 - Charlie4 DNA MER1_type -1815 146 39 307 318 128 36 chr20 59220437 59220621 -7447384 + MIR SINE MIR 2 196 -66 508 342 130 33 chr20 59220885 59221315 -7446690 + L2 LINE L2 2837 3308 -5 2073 103 7 0 chr20 59221322 59221640 -7446365 - AluSx SINE Alu 0 320 1 231 302 12 23 chr20 59223576 59223662 -7444343 + L1MC/D LINE L1 5556 5640 -2168 269 243 14 0 chr20 59223701 59223771 -7444234 + (TA)n Simple_repeat Simple_repeat 2 72 0 717 211 44 0 chr20 59223911 59224091 -7443914 - MER20 DNA MER1_type -31 188 1 635 337 24 16 chr20 59224967 59225213 -7442792 + MIR SINE MIR 7 254 -8 1436 221 25 88 chr20 59226266 59226665 -7441340 + MLT1A2 LTR MaLR 1 374 0 227 329 29 0 chr20 59226924 59226994 -7441011 - L2 LINE L2 -14 3258 3187 364 297 28 35 chr20 59227179 59227324 -7440681 - MIR SINE MIR -19 243 100 611 302 45 22 chr20 59228347 59228569 -7439436 + MIR SINE MIR 35 261 -1 222 243 353 22 chr20 59229007 59229283 -7438722 + L2 LINE L2 2610 2973 -299 369 303 144 0 chr20 59229410 59229542 -7438463 + MIR SINE MIR 111 261 -1 252 343 59 53 chr20 59229541 59229710 -7438295 + L2 LINE L2 3144 3313 0 * 3161 182 56 42 chr20 59229807 59230560 -7437445 + L1MD2 LINE L1 5595 6357 -2 443 333 132 0 chr20 59231257 59231470 -7436535 - L2 LINE L2 -188 3125 2885 254 255 59 10 chr20 59232047 59232149 -7435856 - MIR SINE MIR -72 136 30 300 353 0 0 chr20 59232379 59232481 -7435524 - MIR SINE MIR -44 218 117 1010 173 67 24 chr20 59232508 59232716 -7435289 + MER20 DNA MER1_type 3 219 0 238 270 40 14 chr20 59232716 59232790 -7435215 + MIR SINE MIR 182 257 -5 290 363 8 24 chr20 59232943 59233067 -7434938 + L2 LINE L2 3151 3272 0 270 223 50 58 chr20 59233737 59233858 -7434147 - L1MD2 LINE L1 -5 6354 6235 265 298 121 7 chr20 59233899 59234040 -7433965 - MIR3 SINE MIR -49 159 3 * 266 385 117 3 chr20 59234040 59234320 -7433685 + L2 LINE L2 2959 3271 -1 346 261 80 0 chr20 59234485 59234573 -7433432 + MIR SINE MIR 61 155 -107 312 27 0 0 chr20 59235727 59235764 -7432241 + (TG)n Simple_repeat Simple_repeat 2 38 0 184 98 24 24 chr20 59238568 59238609 -7429396 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 504 283 121 0 chr20 59238628 59238794 -7429211 + MIR SINE MIR 21 206 -56 358 369 17 11 chr20 59238827 59239006 -7428999 + MIR SINE MIR 69 248 -14 223 286 183 0 chr20 59239481 59239607 -7428398 - MIR3 SINE MIR -13 195 47 254 312 21 21 chr20 59239635 59239776 -7428229 - MER117 DNA MER1_type -20 177 37 832 177 77 48 chr20 59240477 59240686 -7427319 - MER20 DNA MER1_type 0 219 5 236 295 38 36 chr20 59240832 59240979 -7427026 - MIR SINE MIR -37 171 23 353 350 36 14 chr20 59242131 59242271 -7425734 - MIR SINE MIR -3 259 117 273 281 52 42 chr20 59243290 59243386 -7424619 + L2 LINE L2 3217 3313 0 564 282 18 12 chr20 59244288 59244451 -7423554 - MIR SINE MIR -14 248 85 417 298 76 50 chr20 59246725 59246963 -7421042 + MIR SINE MIR 6 249 -13 737 164 90 0 chr20 59247697 59247831 -7420174 + AluSq/x SINE Alu 1 146 -167 498 239 197 0 chr20 59247975 59248117 -7419888 - MER5B DNA MER1_type -8 170 1 258 298 99 39 chr20 59249429 59249610 -7418395 + MER117 DNA MER1_type 5 196 -1 342 353 96 8 chr20 59251504 59251734 -7416271 - MIR SINE MIR -12 250 1 2268 115 0 6 chr20 59252925 59253238 -7414767 + AluSx SINE Alu 1 311 -1 238 316 31 10 chr20 59254274 59254372 -7413633 + L2 LINE L2 3169 3268 -45 422 324 128 10 chr20 59254809 59255013 -7412992 + MIR SINE MIR 19 246 -16 277 274 126 7 chr20 59256300 59256435 -7411570 + Charlie8 DNA MER1_type 84 234 -2183 189 211 0 0 chr20 59257285 59257337 -7410668 + (TG)n Simple_repeat Simple_repeat 1 52 0 205 238 0 0 chr20 59257765 59257807 -7410198 + L2 LINE L2 3228 3269 -3 776 174 41 41 chr20 59257943 59258115 -7409890 + MER20 DNA MER1_type 35 206 -13 205 305 95 0 chr20 59258941 59259036 -7408969 + MIR3 SINE MIR 88 191 -17 199 255 21 64 chr20 59259138 59259232 -7408773 - MIR3 SINE MIR -32 176 87 216 158 0 0 chr20 59259398 59259436 -7408569 + CT-rich Low_complexity Low_complexity 4 41 0 35 71 0 0 chr20 59261469 59261539 -7406466 + GC_rich Low_complexity Low_complexity 1 70 0 21 0 0 0 chr20 59261713 59261734 -7406271 + GC_rich Low_complexity Low_complexity 1 21 0 60 77 0 0 chr20 59261765 59261895 -7406110 + GC_rich Low_complexity Low_complexity 1 130 0 219 36 0 0 chr20 59262091 59262119 -7405886 + (CCG)n Simple_repeat Simple_repeat 2 29 0 23 33 0 0 chr20 59262225 59262255 -7405750 + GC_rich Low_complexity Low_complexity 1 30 0 369 263 206 0 chr20 59263110 59263285 -7404720 - MIR SINE MIR -5 257 47 379 281 25 16 chr20 59264511 59264632 -7403373 + MIR SINE MIR 78 199 -63 256 240 0 125 chr20 59264670 59264774 -7403231 - MIR SINE MIR -64 198 108 390 182 8 12 chr20 59264864 59264995 -7403010 - MER53 DNA DNA 0 189 1 327 308 174 28 chr20 59265243 59265496 -7402509 - L2 LINE L2 -1 3312 3023 256 193 56 73 chr20 59266043 59266119 -7401886 + MER45 DNA AcHobo 1 77 -1504 22 0 0 0 chr20 59266119 59266141 -7401864 + AT_rich Low_complexity Low_complexity 1 22 0 256 193 56 73 chr20 59266141 59266215 -7401790 + MER45 DNA AcHobo 77 1537 -44 276 267 0 56 chr20 59266678 59266768 -7401237 - MIR SINE MIR 0 262 178 441 262 193 0 chr20 59266800 59266945 -7401060 - MIR SINE MIR -65 197 25 284 254 43 14 chr20 59267881 59268019 -7399986 + (TG)n Simple_repeat Simple_repeat 2 143 0 311 310 16 8 chr20 59268306 59268435 -7399570 - MIR3 SINE MIR -29 179 50 513 270 48 42 chr20 59269070 59269259 -7398746 + MIR SINE MIR 68 257 -5 1747 144 14 71 chr20 59269259 59269612 -7398393 + MER44D DNA MER2_type 1 603 -6 402 217 57 28 chr20 59270082 59270188 -7397817 + L2 LINE L2 3204 3312 -1 284 273 216 11 chr20 59270257 59270605 -7397400 + L1ME4a LINE L1 5647 6065 -56 21 0 0 0 chr20 59270624 59270645 -7397360 + AT_rich Low_complexity Low_complexity 1 21 0 208 206 159 0 chr20 59271007 59271070 -7396935 + MIR SINE MIR 65 137 -125 217 224 0 20 chr20 59271084 59271133 -7396872 - L2 LINE L2 -1 3271 3224 196 319 0 0 chr20 59271379 59271426 -7396579 + L2 LINE L2 3208 3254 -18 1580 137 6 126 chr20 59271457 59271799 -7396206 + AluJo SINE Alu 1 301 -1 649 276 3 117 chr20 59271800 59272090 -7395915 - MIR SINE MIR 0 262 6 217 188 52 104 chr20 59272320 59272416 -7395589 - L2 LINE L2 -31 3241 3151 21 36 0 0 chr20 59272619 59272647 -7395358 + GC_rich Low_complexity Low_complexity 1 28 0 541 309 34 6 chr20 59272840 59273018 -7394987 + MIR SINE MIR 37 219 -43 297 317 149 12 chr20 59273014 59273175 -7394830 - L3 LINE CR1 -134 1443 1261 * 680 219 90 0 chr20 59273222 59273377 -7394628 - MER45A DNA AcHobo -9 169 1 272 283 30 40 chr20 59273582 59273681 -7394324 + MIR SINE MIR 125 222 -40 439 279 15 47 chr20 59273682 59273865 -7394140 - L1ME3 LINE L1 0 6166 5987 1189 274 27 68 chr20 59273920 59273983 -7394022 - L1ME3 LINE L1 -175 5987 5923 1814 146 17 7 chr20 59273983 59274278 -7393727 - AluJo SINE Alu -2 310 13 1189 274 27 68 chr20 59274278 59274773 -7393232 - L1ME3 LINE L1 -239 5923 5452 299 325 40 26 chr20 59274883 59275034 -7392971 - L3 LINE CR1 -851 726 574 292 304 37 37 chr20 59275246 59275381 -7392624 - MIR SINE MIR 0 262 128 266 132 0 0 chr20 59275388 59275426 -7392579 + MIR SINE MIR 112 149 -59 421 215 25 51 chr20 59275489 59275647 -7392358 + (CAGAGA)n Simple_repeat Simple_repeat 4 157 0 569 249 84 112 chr20 59275652 59275901 -7392104 + MLT1D LTR MaLR 226 505 0 1189 234 63 42 chr20 59276052 59276462 -7391543 - MLT1C LTR MaLR -43 424 6 2352 55 0 0 chr20 59276472 59276761 -7391244 - AluY SINE Alu -22 289 1 419 91 0 15 chr20 59276966 59277032 -7390973 + (TTCA)n Simple_repeat Simple_repeat 1 65 0 240 319 0 0 chr20 59277043 59277112 -7390893 - L2 LINE L2 -61 3252 3184 297 277 193 59 chr20 59277484 59277841 -7390164 + L2 LINE L2 2819 3223 -49 1867 142 18 0 chr20 59278528 59278810 -7389195 + AluJb SINE Alu 3 289 -23 471 370 46 0 chr20 59278837 59278977 -7389028 - MIR SINE MIR -25 237 82 2129 126 0 0 chr20 59278977 59279287 -7388718 - AluSx SINE Alu -2 310 1 471 370 46 0 chr20 59279287 59279362 -7388643 - MIR SINE MIR -180 82 12 204 330 99 0 chr20 59279610 59279701 -7388304 - MIR SINE MIR -59 203 104 193 323 32 21 chr20 59280010 59280103 -7387902 + MIR SINE MIR 30 123 -85 343 128 28 0 chr20 59280672 59280745 -7387260 + MIR SINE MIR 70 148 -60 223 286 36 80 chr20 59281085 59281197 -7386808 + L2 LINE L2 3202 3308 -5 1626 191 38 35 chr20 59281214 59281537 -7386468 + MER58B DNA MER1_type 1 327 -2093 1594 189 7 20 chr20 59281537 59281838 -7386167 + AluJo SINE Alu 1 297 -15 1626 191 38 35 chr20 59281838 59281854 -7386151 + MER58B DNA MER1_type 327 341 0 596 209 169 0 chr20 59281862 59282010 -7385995 - MER5B DNA MER1_type 0 178 6 268 319 80 31 chr20 59282431 59282594 -7385411 - MIR SINE MIR -90 172 2 21 0 0 0 chr20 59282843 59282864 -7385141 + AT_rich Low_complexity Low_complexity 1 21 0 675 193 28 149 chr20 59283099 59283308 -7384697 - MER20 DNA MER1_type 0 219 43 932 88 13 181 chr20 59283308 59283535 -7384470 - MER53 DNA DNA 0 189 1 675 193 28 149 chr20 59283535 59283574 -7384431 - MER20 DNA MER1_type -176 43 1 264 174 22 0 chr20 59283590 59283653 -7384352 + MIR SINE MIR 104 167 -95 2267 101 129 48 chr20 59283924 59284320 -7383685 - MSTA LTR MaLR 0 428 1 258 287 20 20 chr20 59284323 59284424 -7383581 - L2 LINE L2 -12 3260 3160 215 235 12 62 chr20 59284447 59284528 -7383477 + L2 LINE L2 2465 2541 -773 1211 237 54 8 chr20 59284550 59284904 -7383101 - L1ME2 LINE L1 -47 6117 5748 731 216 29 0 chr20 59284978 59285186 -7382819 + L1MA4 LINE L1 6044 6257 -43 * 1694 260 54 13 chr20 59285178 59285716 -7382289 - L1ME3A LINE L1 -26 6144 5585 400 310 86 23 chr20 59285738 59285912 -7382093 + L2 LINE L2 2548 2732 -582 1520 230 166 9 chr20 59285968 59286403 -7381602 - MLT1D LTR MaLR -1 504 2 638 339 18 5 chr20 59286706 59286924 -7381081 - MIR SINE MIR -11 251 31 2191 134 36 25 chr20 59287424 59287781 -7380224 - THE1B LTR MaLR -3 361 1 496 264 36 14 chr20 59287871 59288011 -7379994 - L2 LINE L2 0 3313 3171 1374 253 33 22 chr20 59288016 59288383 -7379622 - MER70B LTR ERVL -133 445 75 842 297 87 21 chr20 59288606 59288892 -7379113 - MLT1K LTR MaLR -262 326 22 309 331 16 8 chr20 59288913 59289034 -7378971 + L2 LINE L2 2216 2337 -977 346 346 43 6 chr20 59289438 59289600 -7378405 + L2 LINE L2 2915 3082 -190 416 163 0 11 chr20 59289672 59289764 -7378241 + CT-rich Low_complexity Low_complexity 3 93 0 874 151 16 32 chr20 59290235 59290421 -7377584 - MER53 DNA DNA 0 189 7 1242 249 18 32 chr20 59290469 59290975 -7377030 - MLT1E LTR MaLR 0 593 1 292 333 128 0 chr20 59291118 59291259 -7376746 + MIR SINE MIR 90 248 -14 207 226 38 0 chr20 59291495 59291548 -7376457 - L2 LINE L2 -27 3286 3232 207 330 34 11 chr20 59291574 59291662 -7376343 - MER5B DNA MER1_type -16 162 73 298 227 0 0 chr20 59291726 59291792 -7376213 - MER5A DNA MER1_type -87 102 37 2410 194 20 58 chr20 59291847 59292400 -7375605 + MLT1F1 LTR MaLR 2 533 -34 378 177 0 0 chr20 59292493 59292555 -7375450 - MER5A DNA MER1_type 0 189 128 2196 100 0 3 chr20 59292557 59292857 -7375148 + AluSg SINE Alu 1 299 -11 257 363 13 6 chr20 59293031 59293188 -7374817 + L1MC/D LINE L1 5735 5892 -1916 1145 294 59 29 chr20 59293242 59293409 -7374596 - L1ME4a LINE L1 -11 6110 5950 429 66 0 0 chr20 59293409 59293470 -7374535 + (TA)n Simple_repeat Simple_repeat 1 61 0 1145 294 59 29 chr20 59293470 59293792 -7374213 - L1ME4a LINE L1 -171 5950 5606 517 291 45 45 chr20 59293804 59294024 -7373981 + MIR SINE MIR 10 229 -33 508 321 139 0 chr20 59294126 59294335 -7373670 - MIR SINE MIR -17 245 8 183 279 0 33 chr20 59294342 59294403 -7373602 + MIR SINE MIR 13 71 -191 255 297 99 44 chr20 59294580 59294762 -7373243 - L2 LINE L2 -229 3043 2852 341 320 25 0 chr20 59294779 59294901 -7373104 - MIR SINE MIR -118 144 20 332 202 12 0 chr20 59294930 59295014 -7372991 - Charlie8 DNA MER1_type -2263 154 70 2505 120 28 14 chr20 59295518 59295876 -7372129 - THE1B LTR MaLR -1 363 1 1140 227 5 0 chr20 59296009 59296229 -7371776 + MER58A DNA MER1_type 4 224 0 594 233 160 24 chr20 59296460 59296666 -7371339 - MIR SINE MIR -2 260 27 700 265 14 0 chr20 59297558 59297705 -7370300 - MER45A DNA AcHobo -27 151 3 975 204 19 76 chr20 59297743 59297798 -7370207 - MER33 DNA MER1_type -2289 296 239 1564 177 54 7 chr20 59297798 59298092 -7369913 + AluJb SINE Alu 1 308 -4 975 204 19 76 chr20 59298092 59298350 -7369655 - MER33 DNA MER1_type -2346 239 1 221 296 0 0 chr20 59298847 59298901 -7369104 + L2 LINE L2 3244 3297 -16 186 103 0 0 chr20 59298908 59298937 -7369068 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 241 259 59 12 chr20 59299537 59299622 -7368383 + MER113 DNA MER1_type? 11 99 -422 206 114 0 23 chr20 59299702 59299746 -7368259 + (TATAA)n Simple_repeat Simple_repeat 2 44 0 525 284 7 0 chr20 59299819 59299967 -7368038 - L1MC5 LINE L1 -97 7864 7716 840 259 142 7 chr20 59299979 59300288 -7367717 + MER113 DNA MER1_type? 101 451 -70 606 278 45 0 chr20 59300417 59300615 -7367390 + MIR SINE MIR 44 250 -12 234 150 0 0 chr20 59301055 59301095 -7366910 + (TG)n Simple_repeat Simple_repeat 1 40 0 216 200 0 0 chr20 59301679 59301729 -7366276 + GA-rich Low_complexity Low_complexity 4 53 0 3502 103 80 4 chr20 59301771 59302286 -7365719 + MER41C LTR ERV1 1 554 0 484 215 22 52 chr20 59302348 59302483 -7365522 + MIR SINE MIR 35 165 -97 195 206 29 44 chr20 59302783 59302851 -7365154 + L2 LINE L2 3017 3083 -189 21 0 0 0 chr20 59302955 59302976 -7365029 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr20 59303158 59303196 -7364809 + AT_rich Low_complexity Low_complexity 1 38 0 429 308 47 28 chr20 59303323 59303576 -7364429 - L1MC4a LINE L1 -1804 6004 5747 1412 291 165 4 chr20 59303577 59304085 -7363920 + MLT1G LTR MaLR 1 590 0 4058 178 24 30 chr20 59304169 59304471 -7363534 - L1MB5 LINE L1 -1 6173 5871 2151 55 41 27 chr20 59304471 59304764 -7363241 - AluY SINE Alu -14 297 1 4058 178 24 30 chr20 59304764 59304813 -7363192 - L1MB5 LINE L1 -303 5871 5823 1960 137 0 19 chr20 59304813 59305126 -7362879 - AluJb SINE Alu -5 307 1 4058 178 24 30 chr20 59305126 59305604 -7362401 - L1MB5 LINE L1 -351 5823 5348 1039 239 111 24 chr20 59306272 59306569 -7361436 - L1ME3 LINE L1 -1 6161 5839 786 147 9 22 chr20 59306586 59306763 -7361242 + CT-rich Low_complexity Low_complexity 1 179 -317 1911 110 4 4 chr20 59306763 59307036 -7360969 - AluSx SINE Alu -39 273 1 786 147 9 22 chr20 59307036 59307089 -7360916 + CT-rich Low_complexity Low_complexity 179 496 0 1257 267 74 1 chr20 59307112 59307131 -7360874 - L1MC4a LINE L1 -353 5809 5793 1011 203 53 0 chr20 59307131 59307338 -7360667 + MER20 DNA MER1_type 1 218 -1 1257 267 74 1 chr20 59307338 59307708 -7360297 - L1MC4a LINE L1 -369 5793 5407 234 171 0 0 chr20 59307848 59307889 -7360116 + LTR67 LTR ERVL 96 136 -421 480 276 7 33 chr20 59308234 59308386 -7359619 + L2 LINE L2 3165 3312 -1 398 287 114 60 chr20 59308413 59308747 -7359258 - MLT1K LTR MaLR -32 556 205 452 275 5 87 chr20 59308788 59308995 -7359010 - MLT1L LTR MaLR -418 197 8 1432 197 182 1 chr20 59309082 59309488 -7358517 - MLT1F1 LTR MaLR 0 542 8 260 260 175 19 chr20 59309774 59309928 -7358077 - MIR SINE MIR -14 248 71 515 353 16 23 chr20 59310118 59310376 -7357629 - MIR SINE MIR -1 261 6 267 222 25 25 chr20 59310862 59310943 -7357062 + L2 LINE L2 2198 2278 -1036 888 165 34 34 chr20 59310943 59311149 -7356856 + MER3 DNA MER1_type 1 206 -3 406 342 58 47 chr20 59311198 59311476 -7356529 - LTR16A1 LTR ERVL -30 427 147 2111 124 28 0 chr20 59311707 59311997 -7356008 - AluSx SINE Alu -9 303 6 1440 236 54 44 chr20 59312008 59312508 -7355497 - MLT1D LTR MaLR 0 505 1 317 284 228 42 chr20 59312532 59312810 -7355195 + L2 LINE L2 2383 2608 -706 1077 253 75 16 chr20 59312810 59313194 -7354811 - MLT1I LTR MaLR 0 409 3 317 284 228 42 chr20 59313194 59313344 -7354661 + L2 LINE L2 2608 2891 -423 208 239 0 0 chr20 59313577 59313623 -7354382 - L2 LINE L2 -6 3307 3262 1605 157 6 72 chr20 59313671 59313876 -7354129 - AluJo SINE Alu -14 298 120 1943 121 161 11 chr20 59313876 59314248 -7353757 - MSTA LTR MaLR 0 428 1 1605 157 6 72 chr20 59314248 59314361 -7353644 - AluJo SINE Alu -192 120 1 792 286 152 22 chr20 59315606 59316301 -7351704 - L2 LINE L2 -142 3171 2376 2201 127 14 27 chr20 59316317 59316686 -7351319 - THE1B LTR MaLR 0 364 1 461 244 122 18 chr20 59316794 59316958 -7351047 + MIR SINE MIR 82 262 0 2737 214 73 84 chr20 59317144 59317965 -7350040 - L1ME LINE L1 -2620 3460 2653 2403 95 0 0 chr20 59317965 59318269 -7349736 + AluY SINE Alu 1 304 -7 2737 214 73 84 chr20 59318269 59318583 -7349422 - L1ME LINE L1 -3427 2653 2337 312 304 39 20 chr20 59318584 59318686 -7349319 + L1MEc LINE L1 1993 2096 -4300 1978 257 66 94 chr20 59318700 59319061 -7348944 - L1ME LINE L1 -3874 2387 2017 1618 189 3 21 chr20 59319061 59319352 -7348653 + AluJb SINE Alu 14 299 -13 1978 257 66 94 chr20 59319352 59320776 -7347229 - L1ME LINE L1 -4244 2017 652 1961 131 23 57 chr20 59320816 59321161 -7346844 + THE1C LTR MaLR 1 334 -41 2192 109 3 0 chr20 59321161 59321475 -7346530 - AluSp SINE Alu 0 316 2 1961 131 23 57 chr20 59321475 59321516 -7346489 + THE1C LTR MaLR 334 375 0 1411 187 119 3 chr20 59321516 59321826 -7346179 + MLT1D LTR MaLR 30 375 -130 445 191 21 0 chr20 59321818 59321912 -7346093 + MLT1D LTR MaLR 531 626 0 * 705 205 51 0 chr20 59321912 59322068 -7345937 - L1ME LINE L1 -5450 620 457 295 259 59 0 chr20 59322328 59322413 -7345592 + MIR SINE MIR 48 137 -125 1980 103 59 38 chr20 59322755 59323045 -7344960 + AluSg SINE Alu 1 296 -14 299 322 78 47 chr20 59323157 59323579 -7344426 - L2 LINE L2 -2 3270 2836 678 168 0 67 chr20 59323591 59323740 -7344265 + MER53 DNA DNA 1 139 -50 1666 149 14 18 chr20 59323753 59324029 -7343976 + AluJo SINE Alu 13 287 -25 2295 121 0 0 chr20 59324043 59324349 -7343656 + AluSq SINE Alu 1 306 -7 280 192 26 26 chr20 59324350 59324428 -7343577 + MER53 DNA DNA 112 189 0 1698 162 0 19 chr20 59325075 59325346 -7342659 + AluJo SINE Alu 1 266 -46 342 248 115 9 chr20 59325347 59325460 -7342545 + MIR SINE MIR 132 256 -6 890 282 133 7 chr20 59325519 59325820 -7342185 - MER58B DNA MER1_type -2 339 1 386 233 0 12 chr20 59326118 59326204 -7341801 - MER81 DNA DNA -25 89 5 265 86 0 0 chr20 59326395 59326430 -7341575 + U2 snRNA snRNA 2 36 -152 413 228 0 81 chr20 59326677 59326800 -7341205 - MER81 DNA DNA -1 113 1 244 269 108 0 chr20 59326924 59327017 -7340988 + MIR SINE MIR 50 152 -56 532 287 66 69 chr20 59328132 59328990 -7339015 - L1M LINE L1 -758 5388 4573 4691 159 70 20 chr20 59329164 59329604 -7338401 - L1MA7 LINE L1 -2 6289 5872 2210 118 0 10 chr20 59329604 59329910 -7338095 - AluSx SINE Alu -9 303 1 4691 159 70 20 chr20 59329910 59329949 -7338056 - L1MA7 LINE L1 -419 5872 5836 315 0 0 0 chr20 59329949 59329984 -7338021 + (TA)n Simple_repeat Simple_repeat 2 36 0 4691 159 70 20 chr20 59329984 59330403 -7337602 - L1MA7 LINE L1 -455 5836 5439 1503 149 0 0 chr20 59330403 59330618 -7337387 + AluSg/x SINE Alu 88 302 -8 4691 159 70 20 chr20 59330618 59330997 -7337008 - L1MA7 LINE L1 -852 5439 4948 326 265 61 68 chr20 59331713 59331860 -7336145 + L2 LINE L2 3168 3313 0 893 163 6 0 chr20 59332996 59333174 -7334831 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 1140 119 0 0 chr20 59333186 59333363 -7334642 + (TCCA)n Simple_repeat Simple_repeat 4 180 0 209 315 6 0 chr20 59333398 59333563 -7334442 + (TCCA)n Simple_repeat Simple_repeat 3 168 0 297 151 0 0 chr20 59333592 59333645 -7334360 + (ATGGTG)n Simple_repeat Simple_repeat 4 56 0 410 337 29 6 chr20 59333700 59333875 -7334130 + MIR SINE MIR 29 207 -55 263 221 179 11 chr20 59334034 59334129 -7333876 - L2 LINE L2 -3 3310 3200 585 255 14 57 chr20 59335757 59335969 -7332036 + LTR16C LTR ERVL 289 491 0 447 236 37 47 chr20 59336134 59336283 -7331722 - MIR SINE MIR -60 148 33 329 285 257 14 chr20 59336571 59336925 -7331080 - L2 LINE L2 0 3313 2874 296 265 98 20 chr20 59337525 59337627 -7330378 - MIR SINE MIR -48 214 105 1850 163 0 10 chr20 59337738 59338032 -7329973 + AluJo SINE Alu 7 297 -15 494 227 78 0 chr20 59338436 59338564 -7329441 + MIR SINE MIR 47 184 -78 514 222 9 0 chr20 59338768 59338876 -7329129 - MER45A DNA AcHobo -29 149 41 377 190 25 41 chr20 59338944 59339065 -7328940 - L1M4 LINE L1 -785 5361 5243 468 291 0 17 chr20 59340123 59340347 -7327658 + G-rich Low_complexity Low_complexity 1 220 0 292 234 57 32 chr20 59340508 59340666 -7327339 + L2 LINE L2 2818 2979 -293 216 300 0 0 chr20 59341087 59341147 -7326858 + GA-rich Low_complexity Low_complexity 4 63 0 224 182 109 0 chr20 59341235 59341290 -7326715 + MIR SINE MIR 85 145 -117 697 256 142 6 chr20 59341440 59341819 -7326186 + MER45B DNA AcHobo 63 515 -525 1942 199 46 16 chr20 59342002 59342433 -7325572 + MER45B DNA AcHobo 594 1037 -3 457 259 14 27 chr20 59342551 59342698 -7325307 - MIR SINE MIR -21 241 97 1136 281 76 38 chr20 59343639 59344107 -7323898 - L1ME3 LINE L1 -2 6160 5665 270 73 0 0 chr20 59344139 59344180 -7323825 + (CA)n Simple_repeat Simple_repeat 1 41 0 543 291 144 30 chr20 59345971 59346332 -7321673 + MLT1L LTR MaLR 205 606 -9 1282 239 55 14 chr20 59346424 59346771 -7321234 - MER31B LTR ERV1 -104 362 2 1025 290 27 3 chr20 59346771 59347067 -7320938 + LTR16A LTR ERVL 89 391 -59 214 280 27 13 chr20 59347499 59347574 -7320431 - MIR SINE MIR -91 171 96 * 415 302 22 22 chr20 59347566 59347723 -7320282 + MIR SINE MIR 6 163 -45 393 321 110 19 chr20 59347737 59347946 -7320059 + MIR SINE MIR 35 262 0 225 252 0 0 chr20 59348389 59348508 -7319497 + (TG)n Simple_repeat Simple_repeat 1 119 0 246 333 0 0 chr20 59348520 59348622 -7319383 + (TG)n Simple_repeat Simple_repeat 1 102 0 2280 103 3 3 chr20 59348675 59348976 -7319029 - AluSq SINE Alu -12 301 1 321 281 61 53 chr20 59349019 59349133 -7318872 - L1ME4a LINE L1 -5 6116 6002 227 261 189 48 chr20 59349139 59349472 -7318533 - L1MC4a LINE L1 -1606 6202 5823 1371 149 57 36 chr20 59349502 59349750 -7318255 + AluJo SINE Alu 29 281 -31 439 251 91 65 chr20 59349750 59349949 -7318056 - L1ME4a LINE L1 -153 5968 5765 836 328 36 12 chr20 59349950 59350362 -7317643 - L1ME4a LINE L1 -148 5973 5552 402 324 9 58 chr20 59350748 59350973 -7317032 - MIR SINE MIR 0 262 49 464 300 56 30 chr20 59351091 59351730 -7316275 - L1MC4 LINE L1 -153 7889 7098 267 310 70 28 chr20 59352124 59352266 -7315739 + MIR SINE MIR 23 170 -92 1049 297 60 30 chr20 59352396 59352921 -7315084 - MLT1K LTR MaLR 0 588 11 2191 115 3 3 chr20 59353532 59353827 -7314178 - AluSq SINE Alu -18 295 1 1361 141 176 19 chr20 59354092 59354348 -7313657 - AluJb SINE Alu -2 300 5 264 362 61 4 chr20 59354348 59354627 -7313378 + L2 LINE L2 2683 2977 -337 239 54 27 0 chr20 59354798 59354835 -7313170 + (GA)n Simple_repeat Simple_repeat 1 38 0 189 283 19 0 chr20 59354860 59354913 -7313092 + L2 LINE L2 3214 3267 -5 1221 236 50 12 chr20 59354985 59355324 -7312681 - L1MD2 LINE L1 -1 6358 6007 275 316 53 9 chr20 59355830 59355944 -7312061 + LTR67 LTR ERVL 428 546 -11 1078 252 188 14 chr20 59357155 59357827 -7310178 + L2 LINE L2 2521 3312 -1 764 281 142 17 chr20 59358046 59358348 -7309657 - MLT1K LTR MaLR -16 572 233 525 259 134 62 chr20 59359197 59359571 -7308434 + LTR16C LTR ERVL 89 489 -2 332 264 88 50 chr20 59359628 59359810 -7308195 - MIR SINE MIR -72 190 2 265 241 0 0 chr20 59360039 59360097 -7307908 + (TG)n Simple_repeat Simple_repeat 1 58 0 402 244 0 0 chr20 59361639 59361721 -7306284 + L2 LINE L2 3232 3313 0 * 417 278 8 23 chr20 59361719 59361852 -7306153 - MIR SINE MIR -84 178 48 642 243 7 21 chr20 59362647 59362791 -7305214 + MIR SINE MIR 74 215 -47 522 247 84 57 chr20 59362900 59363163 -7304842 - MLT1J LTR MaLR 0 511 242 655 253 139 18 chr20 59363283 59363556 -7304449 + LTR16C LTR ERVL 186 491 0 221 265 174 10 chr20 59363860 59363958 -7304047 - L2 LINE L2 -1 3312 3199 2295 99 0 3 chr20 59364120 59364480 -7303525 - AluSq SINE Alu 0 359 1 4443 104 19 10 chr20 59364482 59365167 -7302838 - L1PA14 LINE L1 -2 6159 5469 430 131 103 37 chr20 59365177 59365284 -7302721 - L1PA13 LINE L1 -18 6145 6032 367 127 63 0 chr20 59365284 59365347 -7302658 - HSMAR2 DNA Mariner -1046 256 190 231 196 59 0 chr20 59365526 59365577 -7302428 + MLT2B2 LTR ERVL 462 515 0 193 150 50 0 chr20 59365588 59365628 -7302377 - MIR3 SINE MIR -49 159 118 791 214 68 15 chr20 59365827 59366033 -7301972 + MER20 DNA MER1_type 3 219 0 256 263 177 20 chr20 59366109 59366307 -7301698 + MLT1K LTR MaLR 10 238 -350 356 310 237 9 chr20 59366650 59366979 -7301026 - MLT1K LTR MaLR -37 551 148 374 326 8 8 chr20 59367410 59367539 -7300466 - MIR SINE MIR -106 156 28 1464 227 38 30 chr20 59367543 59367939 -7300066 - MLT2C2 LTR ERVL -65 399 1 552 283 161 33 chr20 59368184 59368488 -7299517 - MLT1I LTR MaLR -1 408 66 246 371 67 0 chr20 59368599 59368809 -7299196 - L1MC/D LINE L1 -1890 5918 5695 7818 117 26 11 chr20 59368973 59370252 -7297753 - HSMAR2 DNA Mariner -1 1301 4 23 0 0 0 chr20 59370303 59370326 -7297679 + AT_rich Low_complexity Low_complexity 1 23 0 312 317 49 66 chr20 59370334 59370517 -7297488 - HAL1 LINE L1 -33 2474 2295 256 283 11 43 chr20 59372389 59372481 -7295524 - MIR SINE MIR -156 106 18 299 279 44 37 chr20 59372541 59372677 -7295328 - MIR SINE MIR -47 215 79 291 329 0 0 chr20 59372654 59372739 -7295266 - L2 LINE L2 0 3272 3188 * 221 309 0 0 chr20 59372759 59372814 -7295191 + (TG)n Simple_repeat Simple_repeat 2 56 0 213 279 41 75 chr20 59372880 59373027 -7294978 - L2 LINE L2 -251 3062 2921 790 273 65 48 chr20 59373591 59373946 -7294059 + L2 LINE L2 2912 3272 0 434 290 0 23 chr20 59373959 59374090 -7293915 + L3 LINE CR1 1262 1389 -188 189 302 85 23 chr20 59374163 59374292 -7293713 + L2 LINE L2 3136 3272 0 941 161 88 35 chr20 59374396 59374656 -7293349 + MER33 DNA MER1_type 51 324 0 348 263 38 0 chr20 59374712 59374792 -7293213 + Tigger3(Golem) DNA MER2_type 1 83 -2946 6666 135 21 36 chr20 59374905 59375367 -7292638 - Tigger3(Golem) DNA MER2_type 0 3029 2561 2208 135 0 3 chr20 59375367 59375678 -7292327 - AluSq SINE Alu -3 310 1 6666 135 21 36 chr20 59375678 59376352 -7291653 - Tigger3(Golem) DNA MER2_type -468 2561 1911 1702 171 20 27 chr20 59376352 59376651 -7291354 - AluJb SINE Alu -12 300 4 6666 135 21 36 chr20 59376651 59376754 -7291251 - Tigger3(Golem) DNA MER2_type -1118 1911 1808 542 216 20 0 chr20 59376743 59376845 -7291160 - Tigger3(Golem) DNA MER2_type -2923 106 3 * 673 137 29 0 chr20 59376870 59376972 -7291033 + Tigger3(Golem) DNA MER2_type 2925 3029 0 21 0 0 0 chr20 59377349 59377370 -7290635 + AT_rich Low_complexity Low_complexity 1 21 0 359 360 67 37 chr20 59377565 59378017 -7289988 + L1MC4a LINE L1 5652 6117 -4 559 321 60 43 chr20 59378940 59379339 -7288666 - MLT1K LTR MaLR -19 569 164 362 224 46 75 chr20 59379374 59379497 -7288508 + MER53 DNA DNA 1 119 -70 2500 84 0 3 chr20 59379497 59379806 -7288199 + AluSx SINE Alu 1 308 -4 362 224 46 75 chr20 59379806 59379856 -7288149 + MER53 DNA DNA 119 169 -20 268 164 16 0 chr20 59379920 59379981 -7288024 + MER53 DNA DNA 125 186 -3 230 336 25 8 chr20 59380715 59380834 -7287171 + MIR SINE MIR 33 153 -109 288 0 0 0 chr20 59381291 59381323 -7286682 + (CAGGG)n Simple_repeat Simple_repeat 3 34 0 320 265 46 119 chr20 59381451 59381602 -7286403 - L1ME4a LINE L1 -13 6108 5969 270 288 45 9 chr20 59381608 59381719 -7286286 - L2 LINE L2 -5 3267 3153 925 256 83 83 chr20 59381781 59382239 -7285766 + MLT2C2 LTR ERVL 1 458 -6 187 219 49 0 chr20 59382277 59382318 -7285687 - L2 LINE L2 -5 3267 3225 1321 229 131 15 chr20 59382634 59383031 -7284974 - MLT2B1 LTR ERVL 0 520 78 385 191 83 0 chr20 59383029 59383113 -7284892 - MLT1K LTR MaLR -376 91 1 * 239 287 178 10 chr20 59383269 59383370 -7284635 + MIR SINE MIR 22 139 -123 278 308 26 34 chr20 59384152 59384269 -7283736 - L2 LINE L2 0 3313 3198 380 220 10 60 chr20 59384302 59384402 -7283603 - L2 LINE L2 -27 3245 3151 195 280 40 0 chr20 59384579 59384654 -7283351 + MIR SINE MIR 61 138 -124 2278 102 3 29 chr20 59384770 59385084 -7282921 - AluSx SINE Alu -6 306 1 235 262 25 31 chr20 59386777 59386911 -7281094 + MIR SINE MIR 54 185 -77 971 238 187 8 chr20 59386962 59387357 -7280648 - MLT1C LTR MaLR -1 466 1 331 258 133 8 chr20 59387385 59387505 -7280500 - MIR SINE MIR -89 173 39 261 252 14 0 chr20 59388193 59388292 -7279713 + MIR SINE MIR 43 145 -63 209 129 0 0 chr20 59388750 59388781 -7279224 - L2 LINE L2 -19 3294 3264 277 370 16 0 chr20 59389173 59389300 -7278705 - MIR SINE MIR -15 247 119 1070 232 52 77 chr20 59389315 59389833 -7278172 + MLT1D LTR MaLR 1 505 0 599 319 105 22 chr20 59389869 59390239 -7277766 + MLT1K LTR MaLR 182 582 -6 381 268 85 7 chr20 59390360 59390414 -7277591 - MIR3 SINE MIR 0 208 160 1628 165 59 0 chr20 59390414 59390687 -7277318 - AluJb SINE Alu -23 289 1 381 268 85 7 chr20 59390687 59390785 -7277220 - MIR3 SINE MIR -48 160 44 236 303 182 18 chr20 59391486 59391651 -7276354 - MIR SINE MIR -11 251 60 332 299 11 0 chr20 59391670 59391784 -7276221 - MIR SINE MIR -63 145 35 186 204 0 0 chr20 59391941 59391985 -7276020 - L2 LINE L2 -445 2869 2826 209 327 101 31 chr20 59392556 59392715 -7275290 - L2 LINE L2 -1 3312 3143 401 288 22 7 chr20 59392857 59392996 -7275009 - MIR SINE MIR -118 144 4 233 259 35 0 chr20 59393371 59393429 -7274576 - MER5C DNA MER1_type -218 106 47 2367 68 0 0 chr20 59394324 59394644 -7273361 - AluY SINE Alu 0 320 1 182 195 24 0 chr20 59395846 59395887 -7272118 + MIR SINE MIR 102 143 -119 192 345 60 26 chr20 59396712 59396979 -7271026 - L2 LINE L2 -193 3079 2804 223 213 21 0 chr20 59397083 59397130 -7270875 + CT-rich Low_complexity Low_complexity 4 51 0 496 241 0 9 chr20 59397581 59397689 -7270316 + MLT1K LTR MaLR 144 250 -338 2359 181 27 47 chr20 59397770 59398285 -7269720 + MLT1D LTR MaLR 1 505 0 1663 260 58 0 chr20 59398708 59399188 -7268817 - L1ME3 LINE L1 -51 6111 5604 936 264 62 88 chr20 59399194 59399237 -7268768 - HAL1b LINE L1 -684 664 621 2483 130 26 7 chr20 59399237 59399661 -7268344 - MSTB1 LTR MaLR 0 432 1 936 264 62 88 chr20 59399661 59399686 -7268319 - HAL1b LINE L1 -727 621 597 2258 131 0 0 chr20 59399686 59399991 -7268014 - AluSx SINE Alu -7 305 1 936 264 62 88 chr20 59399991 59400565 -7267440 - HAL1b LINE L1 -751 597 38 386 217 0 9 chr20 59400857 59400963 -7267042 + CT-rich Low_complexity Low_complexity 4 108 0 1483 151 110 62 chr20 59401002 59401374 -7266631 + MLT1B LTR MaLR 1 390 0 2024 121 36 15 chr20 59401717 59402047 -7265958 + MER1B DNA MER1_type 1 337 0 2305 114 0 3 chr20 59402462 59402769 -7265236 - AluSx SINE Alu -6 306 1 228 163 0 0 chr20 59403093 59403136 -7264869 + GA-rich Low_complexity Low_complexity 3 45 0 645 227 33 13 chr20 59403136 59403286 -7264719 - MLT1A1 LTR MaLR -1 364 212 214 311 66 20 chr20 59403310 59403472 -7264533 + MIR SINE MIR 23 190 -63 287 49 24 0 chr20 59403915 59403956 -7264049 + (TA)n Simple_repeat Simple_repeat 1 42 0 216 264 0 19 chr20 59404567 59404620 -7263385 - L2 LINE L2 -87 3185 3134 262 320 120 0 chr20 59404714 59404914 -7263091 - MIR SINE MIR -2 260 37 3316 239 64 26 chr20 59404931 59406262 -7261743 - L1MEc LINE L1 -2889 3326 1967 1739 245 105 34 chr20 59406262 59406826 -7261179 - MLT1E1 LTR MaLR -2 652 49 1061 303 35 31 chr20 59406830 59407450 -7260555 - L1MEc LINE L1 -4423 1973 1351 185 316 0 0 chr20 59407468 59407525 -7260480 + L2 LINE L2 3252 3308 -5 601 256 72 22 chr20 59407551 59407731 -7260274 + MIR SINE MIR 5 193 -69 1807 175 48 0 chr20 59408086 59408418 -7259587 - MER7A DNA MER2_type 0 346 1 346 348 27 0 chr20 59408694 59408806 -7259199 - L2 LINE L2 -14 3299 3185 766 117 18 18 chr20 59409385 59409617 -7258388 + (TCTA)n Simple_repeat Simple_repeat 1 232 0 4391 212 51 10 chr20 59409957 59411911 -7256094 - L1MB7 LINE L1 -2 6182 4143 680 167 177 38 chr20 59412005 59412191 -7255814 - L1ME3A LINE L1 -20 6150 5939 254 224 35 17 chr20 59412492 59412550 -7255455 + L2 LINE L2 3250 3308 -5 466 343 59 35 chr20 59412696 59413037 -7254968 + LTR16A LTR ERVL 97 445 -5 221 298 69 61 chr20 59413096 59413227 -7254778 + L2 LINE L2 3140 3271 -1 2242 158 128 20 chr20 59413253 59413598 -7254407 - Charlie1 DNA MER1_type -1 2760 2454 930 170 30 162 chr20 59413598 59413869 -7254136 + MER8 DNA MER2_type 4 238 -1 2242 158 128 20 chr20 59413869 59414080 -7253925 - Charlie1 DNA MER1_type -307 2454 2144 290 313 0 12 chr20 59414071 59414151 -7253854 - Charlie1 DNA MER1_type -2682 79 1 * 290 337 142 0 chr20 59414173 59414342 -7253663 + MIR SINE MIR 70 262 0 257 240 178 47 chr20 59414954 59415028 -7252977 + MIR SINE MIR 117 180 -82 1859 111 12 0 chr20 59415028 59415280 -7252725 + AluSg SINE Alu 44 298 -12 257 240 178 47 chr20 59415280 59415334 -7252671 + MIR SINE MIR 180 262 0 34 0 0 0 chr20 59415335 59415369 -7252636 + AT_rich Low_complexity Low_complexity 1 34 0 228 345 12 24 chr20 59415496 59415580 -7252425 - MIR SINE MIR -59 149 67 2755 263 34 0 chr20 59415916 59416790 -7251215 - L1MB7 LINE L1 -2821 3325 2422 * 2940 205 97 112 chr20 59416780 59417372 -7250633 - L1MCb LINE L1 -4216 2348 1749 1146 107 0 0 chr20 59417372 59417549 -7250456 + (TCTCC)n Simple_repeat Simple_repeat 1 177 0 2940 205 97 112 chr20 59417549 59418259 -7249746 - L1MCb LINE L1 -4815 1749 1030 267 235 0 0 chr20 59418259 59418310 -7249695 + MLT1E1 LTR MaLR 394 444 -210 2940 205 97 112 chr20 59418310 59419338 -7248667 - L1MCb LINE L1 -5534 1030 5 261 240 40 0 chr20 59419668 59419743 -7248262 - MER96 DNA MER1_type? -97 78 1 809 276 53 4 chr20 59419743 59419968 -7248037 + MIR SINE MIR 17 252 -10 304 305 59 17 chr20 59420709 59420827 -7247178 + MIR SINE MIR 13 135 -127 234 299 0 39 chr20 59422042 59422119 -7245886 - MIR SINE MIR -161 101 28 214 223 252 39 chr20 59422403 59422506 -7245499 - MIR SINE MIR -115 147 23 2469 105 19 38 chr20 59424220 59424262 -7243743 - THE1B LTR MaLR 0 364 323 2282 108 0 3 chr20 59424262 59424557 -7243448 + AluSg SINE Alu 1 294 -16 2469 105 19 38 chr20 59424557 59424885 -7243120 - THE1B LTR MaLR -41 323 1 232 296 182 15 chr20 59424896 59424930 -7243075 + MIR SINE MIR 77 104 -158 451 294 0 0 chr20 59424930 59425039 -7242966 - MER81 DNA DNA -1 113 5 232 296 182 15 chr20 59425039 59425136 -7242869 + MIR SINE MIR 104 230 -32 264 304 0 0 chr20 59425655 59425747 -7242258 + (CAAGT)n Simple_repeat Simple_repeat 5 96 0 216 360 9 9 chr20 59426087 59426201 -7241804 + MIR SINE MIR 137 250 -12 206 297 62 0 chr20 59426486 59426550 -7241455 + L3 LINE CR1 1357 1424 -153 242 252 236 0 chr20 59426743 59426870 -7241135 + MIR SINE MIR 17 173 -89 666 187 72 206 chr20 59426873 59426996 -7241009 - MLT1D LTR MaLR -1 504 366 1654 137 11 22 chr20 59426996 59427267 -7240738 + AluJb SINE Alu 37 304 -8 666 187 72 206 chr20 59427267 59427603 -7240402 - MLT1D LTR MaLR -139 366 69 588 301 39 13 chr20 59427639 59427868 -7240137 + MIR SINE MIR 21 255 -7 921 284 21 4 chr20 59428630 59428866 -7239139 + MIR SINE MIR 2 241 -21 468 211 49 8 chr20 59430425 59430548 -7237457 - L1ME2 LINE L1 -16 6148 6021 238 312 176 41 chr20 59431348 59431518 -7236487 + L2 LINE L2 2906 3098 -174 489 259 86 46 chr20 59433805 59433979 -7234026 - MIR SINE MIR -25 237 57 343 232 232 18 chr20 59434591 59434703 -7233302 - MER5A DNA MER1_type -7 182 47 2300 253 94 71 chr20 59435229 59435988 -7232017 - L1MC4 LINE L1 0 8042 7302 2711 141 26 5 chr20 59435988 59436407 -7231598 + MSTA LTR MaLR 1 428 0 2300 253 94 71 chr20 59436407 59436600 -7231405 - L1MC4 LINE L1 -740 7302 7115 204 40 0 0 chr20 59436600 59436625 -7231380 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 2300 253 94 71 chr20 59436625 59437048 -7230957 - L1MC4 LINE L1 -927 7115 6635 244 292 69 15 chr20 59437200 59437330 -7230675 + LTR16A1 LTR ERVL 143 279 -178 254 343 42 19 chr20 59437469 59437682 -7230323 - L1MC4a LINE L1 -1245 6563 6346 23 54 0 0 chr20 59437745 59437782 -7230223 + AT_rich Low_complexity Low_complexity 1 37 0 214 320 41 52 chr20 59437927 59438024 -7229981 - MIR3 SINE MIR -46 162 67 2422 118 16 8 chr20 59438047 59438413 -7229592 - L1PB1 LINE L1 -2 6149 5781 368 276 23 0 chr20 59438415 59438502 -7229503 - L1MC4 LINE L1 -1339 6703 6615 216 125 0 75 chr20 59438511 59438591 -7229414 + (TA)n Simple_repeat Simple_repeat 1 74 0 208 0 0 36 chr20 59438591 59438619 -7229386 + (CA)n Simple_repeat Simple_repeat 1 27 0 5501 168 7 9 chr20 59438619 59440287 -7227718 - L1P5 LINE L1 -361 5790 4127 2153 261 82 41 chr20 59440288 59441221 -7226784 - L1MC4a LINE L1 -1523 6285 5315 2366 93 3 6 chr20 59441271 59441584 -7226421 - AluSx SINE Alu 0 312 1 2389 105 0 0 chr20 59441584 59441887 -7226118 - AluSg SINE Alu -6 304 1 266 216 62 41 chr20 59441888 59441985 -7226020 - L1 LINE L1 -884 5262 5164 317 339 67 5 chr20 59442024 59442219 -7225786 - L1 LINE L1 -1034 5112 4906 2520 167 20 5 chr20 59442296 59442738 -7225267 - MER66A LTR ERV1 -2 476 28 380 216 173 25 chr20 59443085 59443247 -7224758 + L2 LINE L2 2569 2754 -560 811 197 54 132 chr20 59443997 59444369 -7223636 - MLT2D LTR ERVL 0 414 80 567 219 15 66 chr20 59444369 59444506 -7223499 - FLAM_C SINE Alu -1 132 3 811 197 54 132 chr20 59444506 59444574 -7223431 - MLT2D LTR ERVL -334 80 8 218 356 17 35 chr20 59444683 59444798 -7223207 + L2 LINE L2 3143 3255 -17 461 88 22 22 chr20 59446684 59446775 -7221230 + (GGAA)n Simple_repeat Simple_repeat 3 93 0 847 119 53 3 chr20 59446791 59447077 -7220928 + GA-rich Low_complexity Low_complexity 1 300 0 180 311 208 9 chr20 59447108 59447214 -7220791 + L3 LINE CR1 1411 1537 -40 433 243 93 43 chr20 59447298 59447438 -7220567 - MIR SINE MIR -34 228 82 321 294 120 0 chr20 59449035 59449219 -7218786 + LTR16C LTR ERVL 285 490 -1 691 214 130 5 chr20 59449236 59449428 -7218577 - MER20 DNA MER1_type -2 217 2 234 62 0 0 chr20 59449692 59449724 -7218281 + (CA)n Simple_repeat Simple_repeat 1 32 0 212 313 15 0 chr20 59450371 59450438 -7217567 - MIR SINE MIR -9 253 186 * 265 313 54 36 chr20 59450435 59450547 -7217458 + L2 LINE L2 3141 3254 -18 458 333 6 12 chr20 59450570 59450741 -7217264 - MIR SINE MIR -80 182 13 2075 186 47 17 chr20 59450978 59451447 -7216558 - MLT1D LTR MaLR 0 505 23 1321 170 74 139 chr20 59451450 59451910 -7216095 - MSTB1 LTR MaLR -1 431 2 1173 224 75 39 chr20 59451975 59452337 -7215668 - MLT1B LTR MaLR -4 386 12 379 222 80 57 chr20 59452542 59452718 -7215287 + LTR33A LTR ERVL 263 442 -81 1695 142 9 76 chr20 59453136 59453466 -7214539 - AluJb SINE Alu -4 308 1 699 213 52 11 chr20 59453469 59453643 -7214362 + MER3 DNA MER1_type 13 193 -16 297 326 0 0 chr20 59454551 59454646 -7213359 - MIR SINE MIR -112 150 56 419 318 83 16 chr20 59454924 59455116 -7212889 - MIR SINE MIR -43 219 15 419 319 77 39 chr20 59455677 59455884 -7212121 + MIR SINE MIR 26 240 -22 588 269 99 91 chr20 59456293 59456365 -7211640 + MLT1L LTR MaLR 118 188 -427 2520 144 30 23 chr20 59456365 59456796 -7211209 + Tigger2a DNA MER2_type 1 434 0 588 269 99 91 chr20 59456796 59457207 -7210798 + MLT1L LTR MaLR 188 605 -10 530 261 70 83 chr20 59457667 59458135 -7209870 - LTR37B LTR ERV1 0 468 7 225 0 0 0 chr20 59458239 59458264 -7209741 + (CA)n Simple_repeat Simple_repeat 1 25 0 198 0 0 0 chr20 59458855 59458877 -7209128 + (TC)n Simple_repeat Simple_repeat 2 23 0 492 210 16 124 chr20 59458890 59459036 -7208969 + MER69A DNA AcHobo 10 133 -2393 2267 105 0 3 chr20 59459036 59459332 -7208673 + AluSq SINE Alu 1 295 -18 492 210 16 124 chr20 59459332 59459371 -7208634 + MER69A DNA AcHobo 133 175 -2 228 67 0 0 chr20 59460345 59460375 -7207630 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 298 248 76 29 chr20 59460395 59460500 -7207505 - L2 LINE L2 -24 3289 3180 774 171 24 18 chr20 59460759 59460923 -7207082 + MER20 DNA MER1_type 53 217 -2 517 294 48 30 chr20 59462045 59462276 -7205729 + MIR SINE MIR 16 250 -12 327 248 134 0 chr20 59462753 59462910 -7205095 - MER5B DNA MER1_type 0 178 1 611 264 72 0 chr20 59463028 59463195 -7204810 - MIR SINE MIR -46 216 38 648 0 0 0 chr20 59463450 59463522 -7204483 + (GGAA)n Simple_repeat Simple_repeat 4 75 0 344 100 14 0 chr20 59463634 59463704 -7204301 - L1MA4A LINE L1 -4 6299 6229 2120 187 5 42 chr20 59463705 59464139 -7203866 - MER70A LTR ERVL -52 420 3 265 202 67 22 chr20 59464796 59464885 -7203120 - MIR SINE MIR -77 131 39 809 235 64 28 chr20 59464937 59465188 -7202817 + MIR SINE MIR 1 260 -2 216 284 15 15 chr20 59465240 59465307 -7202698 - L2 LINE L2 -68 3204 3138 246 295 98 16 chr20 59465592 59465775 -7202230 - L2 LINE L2 -593 2721 2524 207 276 0 0 chr20 59466404 59466462 -7201543 - L2 LINE L2 -23 3290 3233 391 182 27 55 chr20 59466644 59466754 -7201251 + MIR SINE MIR 64 170 -92 2556 136 26 2 chr20 59467074 59467492 -7200513 - MSTC LTR MaLR 0 428 1 844 282 136 18 chr20 59467816 59468199 -7199806 + MLT1L LTR MaLR 180 607 -8 279 305 93 7 chr20 59468382 59468533 -7199472 + MIR SINE MIR 6 169 -93 647 285 73 48 chr20 59468534 59468945 -7199060 - L1ME LINE L1 -368 5753 5326 1988 149 7 13 chr20 59468945 59469247 -7198758 - AluJb SINE Alu -11 301 2 647 285 73 48 chr20 59469247 59469291 -7198714 - L1ME LINE L1 -795 5326 5285 1361 228 39 22 chr20 59469467 59469831 -7198174 - MLT1A2 LTR MaLR -4 370 1 250 311 68 12 chr20 59470388 59470549 -7197456 - MLT1L LTR MaLR -3 612 443 312 305 126 11 chr20 59470811 59470985 -7197020 - LTR16A1 LTR ERVL -118 339 146 811 171 21 21 chr20 59471038 59471225 -7196780 + MER53 DNA DNA 1 187 -2 1304 204 48 25 chr20 59472455 59472812 -7195193 - MLT1A1 LTR MaLR 0 365 1 311 279 90 0 chr20 59473550 59473672 -7194333 + L2 LINE L2 3137 3269 -3 317 296 6 0 chr20 59474391 59474563 -7193442 + (CA)n Simple_repeat Simple_repeat 2 174 0 263 200 0 67 chr20 59474684 59474759 -7193246 - MER4-int LTR ERV1 -5442 1156 1087 300 344 90 0 chr20 59476076 59476198 -7191807 - L2 LINE L2 -2 3311 3179 389 243 9 28 chr20 59476294 59476401 -7191604 - MIR SINE MIR -63 199 95 1644 265 54 41 chr20 59476521 59477134 -7190871 - L1ME3A LINE L1 -4 6158 5554 2075 98 0 14 chr20 59477134 59477436 -7190569 - AluSg1 SINE Alu 0 309 23 1644 265 54 41 chr20 59477436 59477698 -7190307 - L1ME3A LINE L1 -608 5554 5297 2606 89 16 8 chr20 59477698 59478070 -7189935 + THE1C LTR MaLR 1 375 0 1644 265 54 41 chr20 59478070 59478349 -7189656 - L1ME3A LINE L1 -865 5297 4957 23 0 0 0 chr20 59478483 59478506 -7189499 + AT_rich Low_complexity Low_complexity 1 23 0 619 356 43 30 chr20 59478656 59479042 -7188963 - L2 LINE L2 -3 3269 2880 371 259 129 35 chr20 59480487 59480657 -7187348 - MLT1G LTR MaLR 0 590 405 900 176 4 0 chr20 59480666 59480953 -7187052 + CT-rich Low_complexity Low_complexity 1 288 0 664 198 0 11 chr20 59480966 59481143 -7186862 + CT-rich Low_complexity Low_complexity 2 176 0 674 245 124 23 chr20 59481148 59481413 -7186592 - MLT1G LTR MaLR -298 292 1 361 261 46 59 chr20 59481604 59481757 -7186248 - L2 LINE L2 0 3313 3163 211 270 0 0 chr20 59483187 59483250 -7184755 + A-rich Low_complexity Low_complexity 2 64 0 327 150 0 0 chr20 59483320 59483380 -7184625 + (TTCC)n Simple_repeat Simple_repeat 2 61 0 268 325 60 12 chr20 59483417 59483583 -7184422 + MIR SINE MIR 32 205 -57 1087 119 0 19 chr20 59483956 59484149 -7183856 - AluSg/x SINE Alu 0 312 136 278 236 83 115 chr20 59484149 59484306 -7183699 - MIR SINE MIR -82 126 14 3277 189 83 53 chr20 59484809 59485644 -7182361 - MER21B LTR ERV1 -3 860 1 321 260 0 0 chr20 59486225 59486298 -7181707 - MIR SINE MIR -105 157 85 355 328 165 25 chr20 59486735 59487098 -7180907 + MLT1K LTR MaLR 22 435 -153 2057 144 28 0 chr20 59487558 59487884 -7180121 - MSTC LTR MaLR 0 428 94 3076 119 130 18 chr20 59487885 59488439 -7179566 + LTR8A LTR ERV1 1 616 -111 3036 212 33 1 chr20 59488483 59489187 -7178818 - L1MD2 LINE L1 -4 6355 5630 423 287 60 33 chr20 59489418 59489568 -7178437 - L2 LINE L2 0 3313 3160 538 307 114 40 chr20 59489679 59490099 -7177906 - L2 LINE L2 -495 2819 2369 325 301 153 6 chr20 59490428 59490611 -7177394 - L2 LINE L2 -1880 1434 1225 21 0 0 0 chr20 59490618 59490639 -7177366 + AT_rich Low_complexity Low_complexity 1 21 0 581 274 100 11 chr20 59490662 59490852 -7177153 + MIR SINE MIR 22 228 -34 579 255 30 45 chr20 59492113 59492313 -7175692 - MLT1K LTR MaLR 0 588 392 227 266 0 16 chr20 59494864 59494928 -7173077 + LTR67 LTR ERVL 488 550 -7 598 180 86 0 chr20 59495020 59495148 -7172857 - Charlie1 DNA MER1_type 0 2761 2623 512 160 40 48 chr20 59495145 59495270 -7172735 - Charlie1 DNA MER1_type -2535 226 103 * 182 321 0 0 chr20 59495353 59495409 -7172596 - MIR SINE MIR -63 145 90 269 347 28 28 chr20 59495794 59495938 -7172067 + MIR SINE MIR 7 150 -112 190 287 43 11 chr20 59496041 59496135 -7171870 + L2 LINE L2 2924 3020 -252 5518 141 46 69 chr20 59496221 59497478 -7170527 - Tigger3b DNA MER2_type -3 1228 1 506 160 0 0 chr20 59497534 59497628 -7170377 - MER3 DNA MER1_type 0 209 116 501 325 99 0 chr20 59497667 59497858 -7170147 + LTR16C LTR ERVL 81 290 -201 592 273 137 51 chr20 59498035 59498328 -7169677 - LTR33 LTR ERVL -180 341 24 235 286 133 19 chr20 59498876 59498981 -7169024 + L2 LINE L2 2838 2954 -360 274 283 33 33 chr20 59500728 59500848 -7167157 + L2 LINE L2 2879 2998 -274 1247 79 16 11 chr20 59501006 59501640 -7166365 + (TGGA)n Simple_repeat Simple_repeat 1 637 0 690 206 35 12 chr20 59501923 59502098 -7165907 + MLT1D LTR MaLR 1 148 -357 4096 146 31 52 chr20 59502100 59502903 -7165102 + L1MB3 LINE L1 5395 6180 -3 647 259 197 7 chr20 59502980 59503289 -7164716 + MLT1D LTR MaLR 243 610 -16 217 255 181 11 chr20 59503352 59503446 -7164559 + MIR3 SINE MIR 50 159 -49 189 239 0 0 chr20 59503926 59503972 -7164033 + L2 LINE L2 2923 2968 -346 844 240 36 5 chr20 59504188 59504409 -7163596 - MIR SINE MIR -1 261 34 787 171 17 0 chr20 59504426 59504602 -7163403 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 265 258 16 0 chr20 59504611 59504673 -7163332 + L2 LINE L2 3160 3222 -50 403 347 37 14 chr20 59505610 59505847 -7162158 + MIR SINE MIR 13 262 0 234 0 0 0 chr20 59506201 59506227 -7161778 + (TC)n Simple_repeat Simple_repeat 1 26 0 208 255 0 0 chr20 59506500 59506547 -7161458 - L2 LINE L2 0 3313 3267 2298 240 37 21 chr20 59506640 59507226 -7160779 - MER77 LTR ERV1 -7 598 53 371 282 16 24 chr20 59507532 59507656 -7160349 + MIR SINE MIR 68 190 -72 277 330 10 0 chr20 59507878 59507978 -7160027 - L2 LINE L2 -44 3228 3128 376 363 82 7 chr20 59508191 59508494 -7159511 - L2 LINE L2 -407 2907 2582 412 297 16 33 chr20 59508563 59508745 -7159260 - MER63A DNA MER1_type -5 205 27 657 236 177 3 chr20 59508760 59509048 -7158957 + LTR16A1 LTR ERVL 81 418 -39 277 252 8 87 chr20 59509090 59509217 -7158788 + MER5A DNA MER1_type 70 186 -3 195 300 0 0 chr20 59510058 59510108 -7157897 + MIR SINE MIR 83 132 -76 1377 223 35 21 chr20 59510141 59510518 -7157487 + MER113 DNA MER1_type? 7 388 -133 210 325 12 12 chr20 59510741 59510821 -7157184 + MER5A DNA MER1_type 66 145 -44 233 352 38 0 chr20 59511648 59511753 -7156252 + MIR SINE MIR 110 218 -44 1179 226 153 19 chr20 59511774 59512186 -7155819 + MLT1C LTR MaLR 1 467 0 458 288 85 18 chr20 59512193 59512425 -7155580 - MIR SINE MIR -13 249 4 349 257 29 19 chr20 59512425 59512527 -7155478 + L2 LINE L2 3163 3265 -7 2040 118 7 23 chr20 59512528 59512922 -7155083 + AluSx SINE Alu 1 389 0 350 263 114 18 chr20 59512996 59513110 -7154895 - L2 LINE L2 -12 3260 3136 2176 84 62 0 chr20 59514060 59514333 -7153672 + AluSq SINE Alu 1 290 -23 333 0 0 0 chr20 59514343 59514380 -7153625 + (TG)n Simple_repeat Simple_repeat 2 38 0 427 218 49 0 chr20 59514381 59514482 -7153523 - L1MCa LINE L1 -1339 6983 1995 407 292 0 0 chr20 59514410 59514499 -7153506 + L1MC4 LINE L1 6614 6702 -1340 * 315 95 0 0 chr20 59514531 59514573 -7153432 - AluS SINE Alu -212 91 50 1071 203 97 61 chr20 59515381 59515604 -7152401 + L1MB3 LINE L1 5835 6075 -108 2031 137 0 3 chr20 59515604 59515903 -7152102 + AluSq SINE Alu 1 298 -15 1071 203 97 61 chr20 59515903 59516009 -7151996 + L1MB3 LINE L1 6075 6176 -7 213 271 0 0 chr20 59516791 59516839 -7151166 + GA-rich Low_complexity Low_complexity 1 48 0 503 281 41 67 chr20 59516890 59517231 -7150774 - MLT1K LTR MaLR -27 561 230 593 296 63 55 chr20 59517971 59518369 -7149636 + MLT1K LTR MaLR 173 573 -15 386 242 109 0 chr20 59518540 59518668 -7149337 + MIR SINE MIR 25 166 -96 721 302 22 9 chr20 59519371 59519596 -7148409 + MIR SINE MIR 13 240 -22 462 201 54 7 chr20 59520331 59520538 -7147467 - MLT1K LTR MaLR -346 249 1 190 235 0 20 chr20 59520549 59520600 -7147405 + MIR SINE MIR 210 259 -3 438 307 207 24 chr20 59520950 59521361 -7146644 - L2 LINE L2 -1 3312 2827 320 263 148 54 chr20 59521391 59521722 -7146283 - L2 LINE L2 -557 2757 2396 372 235 34 25 chr20 59522257 59522376 -7145629 + MIR SINE MIR 17 136 -72 571 243 85 60 chr20 59522573 59522808 -7145197 + LTR16C LTR ERVL 251 491 0 288 226 16 0 chr20 59522902 59522964 -7145041 + L2 LINE L2 3210 3272 0 858 20 0 0 chr20 59523835 59523935 -7144070 + (GGAA)n Simple_repeat Simple_repeat 1 100 0 1021 100 12 0 chr20 59523936 59524106 -7143899 + (TGGA)n Simple_repeat Simple_repeat 3 174 0 1635 251 65 0 chr20 59524184 59524551 -7143454 - MLT1E LTR MaLR -3 590 200 387 301 45 6 chr20 59524590 59524746 -7143259 - LTR16A LTR ERVL -288 162 1 181 411 0 0 chr20 59525090 59525163 -7142842 + MIR SINE MIR 177 249 -13 816 221 23 28 chr20 59525214 59525431 -7142574 - MER20 DNA MER1_type 0 219 4 471 328 70 16 chr20 59526546 59527020 -7140985 + L2 LINE L2 2602 3099 -214 225 190 0 35 chr20 59527020 59527078 -7140927 + (CCA)n Simple_repeat Simple_repeat 3 58 0 687 184 9 13 chr20 59527084 59527312 -7140693 + (CACCAT)n Simple_repeat Simple_repeat 1 226 0 301 355 36 36 chr20 59528342 59528562 -7139443 - MIR SINE MIR -15 247 28 844 256 54 35 chr20 59528705 59529021 -7138984 - MER113 DNA MER1_type? -147 374 53 823 156 27 43 chr20 59529129 59529315 -7138690 - MER20 DNA MER1_type 0 219 37 183 295 128 77 chr20 59529947 59530103 -7137902 + MER5B DNA MER1_type 7 170 -8 2506 63 35 0 chr20 59530112 59530459 -7137546 - L1PA8 LINE L1 0 6172 5814 2313 85 23 3 chr20 59530467 59530774 -7137231 - AluSq SINE Alu 0 313 1 225 65 0 0 chr20 59530906 59530937 -7137068 + (T)n Simple_repeat Simple_repeat 1 31 0 357 136 0 0 chr20 59531917 59531976 -7136029 + Alu SINE Alu 243 301 0 503 259 93 12 chr20 59532209 59532371 -7135634 + MER96 DNA MER1_type 1 175 0 204 158 26 0 chr20 59533153 59533191 -7134814 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 937 210 84 57 chr20 59533460 59533865 -7134140 - MER96B DNA MER1_type 0 417 2 414 248 59 0 chr20 59534461 59534562 -7133443 - MER53 DNA DNA -78 111 5 287 244 156 30 chr20 59534685 59534820 -7133185 - L2 LINE L2 -1266 2048 1897 322 174 72 0 chr20 59535290 59535359 -7132646 + ORSL DNA AcHobo 173 246 -29 300 281 31 31 chr20 59536062 59536158 -7131847 + L1MC4 LINE L1 6608 6703 -1339 2104 126 3 17 chr20 59536257 59536559 -7131446 + AluSx SINE Alu 1 298 -14 187 253 218 0 chr20 59536697 59536784 -7131221 - MIR SINE MIR -71 137 32 995 158 13 0 chr20 59537139 59537297 -7130708 + FAM SINE Alu 14 173 -12 1502 51 5 0 chr20 59537842 59538039 -7129966 - L1PA6 LINE L1 0 6154 5957 619 299 96 18 chr20 59538126 59538214 -7129791 + L1ME4a LINE L1 5484 5564 -557 306 0 0 0 chr20 59538214 59538248 -7129757 + (TG)n Simple_repeat Simple_repeat 2 35 0 619 299 96 18 chr20 59538248 59538494 -7129511 + L1ME4a LINE L1 5564 5844 -277 197 320 29 29 chr20 59538997 59539100 -7128905 + MIR3 SINE MIR 4 106 -102 241 236 69 28 chr20 59539593 59539665 -7128340 - MIR SINE MIR -97 165 91 186 167 0 0 chr20 59540052 59540088 -7127917 + (TG)n Simple_repeat Simple_repeat 2 37 0 535 310 11 11 chr20 59540521 59540708 -7127297 + MIR SINE MIR 22 213 -49 206 246 0 35 chr20 59540727 59540784 -7127221 + CT-rich Low_complexity Low_complexity 1 55 0 258 136 0 0 chr20 59540788 59540832 -7127173 + (CAT)n Simple_repeat Simple_repeat 3 46 0 454 245 224 0 chr20 59541213 59541360 -7126645 + MER5A DNA MER1_type 10 189 0 344 342 92 9 chr20 59541444 59541672 -7126333 + MIR SINE MIR 4 250 -12 361 303 58 27 chr20 59541933 59542121 -7125884 + MLT1J LTR MaLR 224 417 -94 485 294 81 41 chr20 59542361 59542582 -7125423 - L1ME4a LINE L1 -69 6052 5823 480 282 66 22 chr20 59543222 59543403 -7124602 - Charlie8 DNA MER1_type -2203 214 26 516 230 9 9 chr20 59544034 59544147 -7123858 - MER81 DNA DNA 0 114 2 587 178 0 0 chr20 59544369 59544470 -7123535 + MER5A DNA MER1_type 9 109 -80 652 258 50 110 chr20 59544838 59545202 -7122803 - MLT1L LTR MaLR 0 615 170 261 379 71 0 chr20 59545411 59545551 -7122454 + L2 LINE L2 3123 3272 0 223 182 0 18 chr20 59546398 59546453 -7121552 + MIR SINE MIR 90 143 -65 1088 130 0 21 chr20 59546614 59546806 -7121199 + MER53 DNA DNA 2 189 0 197 280 0 0 chr20 59547081 59547131 -7120874 - MIR SINE MIR -63 145 96 353 311 16 8 chr20 59547295 59547417 -7120588 + MIR SINE MIR 93 215 -47 262 250 26 0 chr20 59547545 59547621 -7120384 + MIR SINE MIR 88 165 -97 302 368 45 0 chr20 59548495 59548650 -7119355 - MIR SINE MIR -92 170 9 501 260 34 20 chr20 59549856 59550002 -7118003 - MIR3 SINE MIR -59 149 2 683 201 7 0 chr20 59550002 59550271 -7117734 + (GGTTG)n Simple_repeat Simple_repeat 1 270 0 258 286 117 20 chr20 59550726 59550858 -7117147 - MIR SINE MIR -61 147 45 258 258 0 16 chr20 59551184 59551246 -7116759 - L2 LINE L2 0 3313 3253 280 366 20 20 chr20 59551314 59551467 -7116538 + MIR SINE MIR 67 219 -43 2409 46 4 7 chr20 59552329 59552656 -7115349 - AluY SINE Alu 0 326 1 308 206 335 18 chr20 59552690 59552860 -7115145 + MIR SINE MIR 13 236 -26 1790 200 9 0 chr20 59552877 59553222 -7114783 + MER7A DNA MER2_type 1 346 0 238 204 0 0 chr20 59553347 59553396 -7114609 + MIR SINE MIR 140 188 -74 381 156 0 0 chr20 59553749 59553826 -7114179 + (CA)n Simple_repeat Simple_repeat 2 78 0 565 204 147 21 chr20 59554541 59554732 -7113273 + MER113 DNA MER1_type? 3 217 -304 1860 91 3 17 chr20 59554751 59555038 -7112967 + L1PA7 LINE L1 5869 6151 -3 246 305 53 46 chr20 59555110 59555261 -7112744 - MIR3 SINE MIR -56 152 1 647 259 69 93 chr20 59555926 59556358 -7111647 + MLT1K LTR MaLR 141 562 -26 246 232 0 0 chr20 59556500 59556556 -7111449 + L2 LINE L2 3006 3061 -211 406 251 86 53 chr20 59556616 59556803 -7111202 + MIR SINE MIR 8 200 -62 209 261 72 0 chr20 59556939 59557008 -7110997 + L2 LINE L2 3196 3269 -3 311 239 155 58 chr20 59557219 59557374 -7110631 - MER5B DNA MER1_type -4 174 5 1569 203 20 29 chr20 59557845 59558151 -7109854 - AluJo SINE Alu -9 303 1 1861 182 29 13 chr20 59559734 59560118 -7107887 + MLT1B LTR MaLR 1 390 0 314 347 42 7 chr20 59560826 59560970 -7107035 - MLT1K LTR MaLR -419 169 21 1087 209 54 57 chr20 59561013 59561382 -7106623 - MER87 LTR ERV1 0 541 174 552 268 111 0 chr20 59561764 59561917 -7106088 + MIR SINE MIR 47 216 -46 446 323 20 47 chr20 59561929 59562105 -7105900 + L2 LINE L2 2528 2696 -618 964 171 45 0 chr20 59562105 59562281 -7105724 - MER53 DNA DNA -4 185 2 446 323 20 47 chr20 59562281 59562358 -7105647 + L2 LINE L2 2696 2774 -540 510 285 34 28 chr20 59562706 59562885 -7105120 + MIR SINE MIR 60 239 -23 278 329 122 42 chr20 59563586 59564014 -7103991 - L2 LINE L2 -4 3309 2848 1112 226 102 37 chr20 59564078 59564511 -7103494 + MLT1C LTR MaLR 6 466 -1 488 330 19 19 chr20 59564704 59564919 -7103086 - MIR SINE MIR -34 228 14 2244 109 10 0 chr20 59566132 59566435 -7101570 - AluSx SINE Alu -1 311 6 210 205 0 0 chr20 59566470 59566509 -7101496 + L2 LINE L2 3267 3305 -8 189 216 155 62 chr20 59566561 59566658 -7101347 - L2 LINE L2 -259 3054 2949 203 78 78 0 chr20 59566838 59566889 -7101116 + GA-rich Low_complexity Low_complexity 5 59 0 334 212 0 0 chr20 59567602 59567668 -7100337 + MER63 DNA MER1_type 681 746 -316 216 359 16 0 chr20 59568145 59568209 -7099796 - L2 LINE L2 -2 3270 3206 301 262 97 48 chr20 59568248 59568393 -7099612 - L1ME4a LINE L1 -10 6111 5960 411 336 62 57 chr20 59568439 59568683 -7099322 - L1MC4a LINE L1 -1932 5876 5632 1219 272 16 31 chr20 59568787 59569232 -7098773 - L1ME3A LINE L1 0 6170 5733 23 0 0 0 chr20 59569272 59569295 -7098710 + AT_rich Low_complexity Low_complexity 1 23 0 189 107 0 0 chr20 59569643 59569671 -7098334 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 309 310 182 5 chr20 59570313 59570500 -7097505 + L2 LINE L2 2720 2939 -375 320 185 15 46 chr20 59570635 59570700 -7097305 + L2 LINE L2 3234 3296 -17 205 323 48 24 chr20 59571054 59571178 -7096827 - L2 LINE L2 -1 3271 3145 248 235 206 29 chr20 59572035 59572137 -7095868 + MIR3 SINE MIR 37 156 -52 723 280 58 48 chr20 59573287 59573680 -7094325 - MLT2C1 LTR ERVL 0 397 1 1492 197 85 18 chr20 59574147 59574593 -7093412 - MER69 DNA AcHobo -106 2420 1945 1708 201 15 25 chr20 59574627 59575021 -7092984 + MLT2B1 LTR ERVL 6 395 -125 4026 185 80 31 chr20 59575448 59576897 -7091108 - MER52A LTR ERV1 0 1755 1 194 219 73 49 chr20 59577360 59577442 -7090563 - MIR3 SINE MIR -37 171 88 2080 134 0 3 chr20 59578061 59578369 -7089636 + AluSx SINE Alu 1 307 0 194 328 0 0 chr20 59578455 59578513 -7089492 - MIR SINE MIR -106 156 99 257 305 37 12 chr20 59578585 59578667 -7089338 - MIR SINE MIR -96 112 29 401 310 38 6 chr20 59578748 59578906 -7089099 - Charlie8 DNA MER1_type -2178 239 77 642 211 0 0 chr20 59579130 59579310 -7088695 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 201 196 0 0 chr20 59579344 59579390 -7088615 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 322 247 146 38 chr20 59579675 59579833 -7088172 - L2 LINE L2 -3 3310 3136 275 344 38 38 chr20 59580234 59580417 -7087588 - MIR3 SINE MIR -6 202 20 502 302 173 30 chr20 59580427 59581077 -7086928 + L2 LINE L2 2506 3295 -18 522 273 128 21 chr20 59581822 59582043 -7085962 - MIR SINE MIR -16 246 13 740 312 130 39 chr20 59582314 59583104 -7084901 + L1M3 LINE L1 4370 5237 -909 282 295 84 26 chr20 59583124 59583314 -7084691 + L1M3 LINE L1 5263 5463 -705 220 26 26 26 chr20 59583349 59583387 -7084618 + (TTTTTG)n Simple_repeat Simple_repeat 6 43 0 2245 123 0 0 chr20 59583389 59583689 -7084316 - AluSx SINE Alu -12 300 1 213 263 53 88 chr20 59584458 59584572 -7083433 + MIR3 SINE MIR 97 206 -2 447 300 49 21 chr20 59584593 59584836 -7083169 + L1ME1 LINE L1 5614 5863 -258 672 216 26 0 chr20 59584856 59585009 -7082996 + MER97b DNA MER1_type? 21 177 -876 1031 63 0 0 chr20 59586007 59586134 -7081871 + AluY SINE Alu 185 311 0 900 268 63 96 chr20 59586135 59586712 -7081293 + L1MEc LINE L1 828 1402 -1174 239 271 104 0 chr20 59586722 59586818 -7081187 + L1ME1 LINE L1 6053 6158 -8 524 307 96 56 chr20 59586836 59587286 -7080719 + HAL1b LINE L1 247 714 -634 2571 234 38 67 chr20 59587610 59587926 -7080079 + L1MC5 LINE L1 6638 6961 -1000 2297 84 14 0 chr20 59587926 59588213 -7079792 + AluSc SINE Alu 1 291 -18 2571 234 38 67 chr20 59588213 59588808 -7079197 + L1MC5 LINE L1 6961 7523 -438 263 289 57 38 chr20 59588899 59589110 -7078895 + L1ME3A LINE L1 5956 6170 0 231 278 121 29 chr20 59589100 59589185 -7078820 + L1ME4a LINE L1 5887 5963 -158 * 2011 142 7 3 chr20 59589185 59589481 -7078524 + AluJb SINE Alu 1 297 -15 231 278 121 29 chr20 59589481 59589568 -7078437 + L1ME4a LINE L1 5963 6075 -46 312 311 22 0 chr20 59589671 59589761 -7078244 + L2 LINE L2 3217 3308 -5 192 313 15 0 chr20 59590522 59590589 -7077416 + L2 LINE L2 3184 3251 -21 617 263 56 15 chr20 59590596 59590992 -7077013 + L2 LINE L2 2733 3148 -165 245 335 45 52 chr20 59592337 59592606 -7075399 + L2 LINE L2 2639 2905 -409 263 336 44 26 chr20 59592744 59592857 -7075148 + L2 LINE L2 3148 3262 -10 365 247 77 77 chr20 59593316 59593486 -7074519 + MER5A DNA MER1_type 19 188 -1 181 287 0 81 chr20 59593588 59593675 -7074330 + L2 LINE L2 1652 1731 -1583 369 247 165 19 chr20 59593902 59594006 -7073999 + MIR SINE MIR 79 167 -95 2124 92 101 21 chr20 59594006 59594343 -7073662 + THE1B LTR MaLR 1 364 0 369 247 165 19 chr20 59594343 59594396 -7073609 + MIR SINE MIR 167 259 -3 281 320 47 27 chr20 59596918 59597068 -7070937 - MIR SINE MIR -88 174 22 284 303 15 30 chr20 59597428 59597560 -7070445 - LTR33 LTR ERVL -379 142 13 481 301 49 35 chr20 59597657 59597883 -7070122 - L2 LINE L2 -3 3310 3082 823 273 30 17 chr20 59598319 59598550 -7069455 - MIR SINE MIR -6 256 23 300 342 40 20 chr20 59598552 59598704 -7069301 - MIR SINE MIR -73 189 35 2402 73 0 16 chr20 59599469 59599772 -7068233 - AluY SINE Alu -13 298 1 517 33 0 0 chr20 59599784 59599845 -7068160 - AluY SINE Alu -179 132 72 318 284 23 23 chr20 59600013 59600101 -7067904 - L2 LINE L2 -16 3256 3169 631 258 10 14 chr20 59600885 59600987 -7067018 + MER113 DNA MER1_type? 4 105 -416 2620 138 37 4 chr20 59600987 59601443 -7066562 - L1MC2 LINE L1 -1 6343 5873 631 258 10 14 chr20 59601443 59601549 -7066456 + MER113 DNA MER1_type? 105 211 -310 1445 224 8 50 chr20 59601561 59601941 -7066064 + L1MB7 LINE L1 37 400 -6142 547 172 112 0 chr20 59601952 59602086 -7065919 + L1MC2 LINE L1 5964 6112 -232 2201 223 8 14 chr20 59602130 59602614 -7065391 + L1MB7 LINE L1 452 932 -5610 * 2557 223 37 37 chr20 59602583 59603333 -7064672 + L1MB7 LINE L1 4344 5093 -1551 3870 185 66 15 chr20 59603333 59604400 -7063605 + L1MB7 LINE L1 5565 6681 -1 21 71 0 0 chr20 59604443 59604485 -7063520 + AT_rich Low_complexity Low_complexity 1 42 0 741 279 155 18 chr20 59604730 59605124 -7062881 - MLT1J LTR MaLR -42 469 22 582 223 63 40 chr20 59605402 59605577 -7062428 - MIR SINE MIR -56 206 28 201 74 0 0 chr20 59606323 59606350 -7061655 + (GGGA)n Simple_repeat Simple_repeat 4 30 0 187 271 17 17 chr20 59606518 59606577 -7061428 - L2 LINE L2 -29 3284 3226 756 224 157 9 chr20 59606597 59606807 -7061198 - MIR SINE MIR -1 261 21 192 221 104 52 chr20 59607711 59607788 -7060217 - MIR SINE MIR -12 250 170 317 339 129 0 chr20 59607851 59608022 -7059983 - MIR SINE MIR -54 208 16 498 257 52 0 chr20 59608275 59608411 -7059594 - MIR SINE MIR -72 190 48 1987 132 63 0 chr20 59608837 59609124 -7058881 - AluSq SINE Alu -2 311 7 377 314 63 0 chr20 59609308 59609467 -7058538 + MIR SINE MIR 33 201 -61 867 230 5 20 chr20 59609559 59609755 -7058250 + MER58A DNA MER1_type 29 221 -3 459 230 12 43 chr20 59609755 59609916 -7058089 - MER104 DNA Tc2 -22 158 3 525 214 17 26 chr20 59610051 59610168 -7057837 + MIR SINE MIR 52 167 -95 2245 160 22 0 chr20 59610390 59610746 -7057259 - THE1B LTR MaLR 0 364 1 500 331 78 24 chr20 59611280 59611652 -7056353 + L1MEc LINE L1 56 447 -5949 7826 235 51 51 chr20 59611951 59613383 -7054622 + L1M3de LINE L1 1064 2494 -3721 1703 174 0 0 chr20 59613383 59613670 -7054335 + AluJo SINE Alu 1 287 -25 7826 235 51 51 chr20 59613670 59615916 -7052089 + L1M3de LINE L1 2494 4650 -1565 1456 124 121 30 chr20 59615916 59616213 -7051792 - AluSg SINE Alu 0 310 6 7826 235 51 51 chr20 59616213 59616505 -7051500 + L1M3de LINE L1 4650 4940 -1275 429 218 69 0 chr20 59616505 59616606 -7051399 - MER96 DNA MER1_type? -67 108 1 501 164 43 17 chr20 59617240 59617356 -7050649 + LTR16C LTR ERVL 373 491 0 376 206 284 7 chr20 59617759 59617900 -7050105 + MER5A DNA MER1_type 10 189 0 713 279 81 0 chr20 59617948 59618145 -7049860 + MIR SINE MIR 48 260 -2 398 279 130 0 chr20 59618351 59618505 -7049500 - MER5B DNA MER1_type -2 176 3 1989 133 7 0 chr20 59618876 59619170 -7048835 + AluSq SINE Alu 1 296 -17 866 135 45 39 chr20 59619621 59619799 -7048206 + MER53 DNA DNA 11 189 0 785 304 96 47 chr20 59619926 59620332 -7047673 + MLT1J LTR MaLR 5 438 -73 1694 171 31 3 chr20 59620332 59620625 -7047380 - AluSx SINE Alu -11 301 1 785 304 96 47 chr20 59620625 59620685 -7047320 + MLT1J LTR MaLR 438 494 -17 202 243 86 0 chr20 59623047 59623117 -7044888 + L2 LINE L2 3150 3225 -47 510 31 0 0 chr20 59623132 59623196 -7044809 + (TGAA)n Simple_repeat Simple_repeat 1 64 0 267 242 268 13 chr20 59623450 59623603 -7044402 + L2 LINE L2 2554 2745 -569 674 309 94 35 chr20 59623665 59623839 -7044166 + L2 LINE L2 2887 3049 -264 234 0 0 0 chr20 59623839 59623865 -7044140 + (CCA)n Simple_repeat Simple_repeat 1 26 0 674 309 94 35 chr20 59623865 59624092 -7043913 + L2 LINE L2 3049 3312 -1 1346 223 121 17 chr20 59624667 59625079 -7042926 + MLT1C LTR MaLR 13 467 0 562 266 116 0 chr20 59626143 59626316 -7041689 - MIR SINE MIR -3 259 67 208 293 81 10 chr20 59626954 59627053 -7040952 + MIR SINE MIR 27 132 -130 262 250 30 60 chr20 59627478 59627578 -7040427 + L2 LINE L2 3154 3250 -22 828 39 0 0 chr20 59627667 59627771 -7040234 + AluY SINE Alu 205 308 -3 538 299 60 37 chr20 59628266 59628534 -7039471 + MLT1K LTR MaLR 1 274 -314 534 266 102 33 chr20 59628741 59628985 -7039020 + MLT1K LTR MaLR 313 573 -15 636 251 42 67 chr20 59629144 59629427 -7038578 + L2 LINE L2 3038 3313 0 772 256 150 52 chr20 59629479 59629885 -7038120 - MLT1J LTR MaLR -60 451 6 275 324 89 13 chr20 59629916 59630141 -7037864 + L1ME4a LINE L1 5773 6014 -107 2089 98 11 0 chr20 59630227 59630514 -7037491 - AluSx SINE Alu -22 290 1 335 244 30 38 chr20 59630598 59630729 -7037276 + GA-rich Low_complexity Low_complexity 2 131 0 9475 161 81 84 chr20 59631545 59631705 -7036300 + Charlie5 DNA MER1_type 2 161 -2463 1830 181 48 73 chr20 59631705 59631766 -7036239 - MLT1D LTR MaLR 0 505 444 1499 173 44 4 chr20 59631766 59632061 -7035944 + AluJb SINE Alu 1 306 0 1830 181 48 73 chr20 59632061 59632516 -7035489 - MLT1D LTR MaLR -61 444 1 9475 161 81 84 chr20 59632516 59633189 -7034816 + Charlie5 DNA MER1_type 161 835 -1789 1307 86 0 0 chr20 59633189 59633363 -7034642 - AluY SINE Alu -5 306 133 2397 48 7 10 chr20 59633363 59633672 -7034333 - AluY SINE Alu -2 309 2 9475 161 81 84 chr20 59633672 59635288 -7032717 + Charlie5 DNA MER1_type 833 2617 -7 331 319 51 25 chr20 59635701 59635858 -7032147 - L1M4 LINE L1 -2787 3359 3199 600 250 15 0 chr20 59635859 59635991 -7032014 - FLAM_A SINE Alu -8 134 1 602 279 120 45 chr20 59635991 59636324 -7031681 - L1M4 LINE L1 -2931 3215 2858 1004 255 122 23 chr20 59636357 59636702 -7031303 + L1ME3 LINE L1 5778 6156 -6 304 264 88 22 chr20 59637361 59637543 -7030462 - L1M4 LINE L1 -3435 2711 2518 1758 170 36 9 chr20 59638245 59638581 -7029424 - L1PB4 LINE L1 0 6156 5812 552 219 73 29 chr20 59638594 59638731 -7029274 + L2 LINE L2 3171 3313 0 342 377 27 0 chr20 59638799 59638945 -7029060 - MIR SINE MIR -64 198 49 324 318 81 67 chr20 59639077 59639360 -7028645 + L2 LINE L2 2982 3268 -4 182 128 26 51 chr20 59639407 59639446 -7028559 + L2 LINE L2 3029 3066 -206 202 301 27 14 chr20 59639906 59639979 -7028026 - L2 LINE L2 -61 3211 3138 477 273 103 18 chr20 59640157 59640322 -7027683 + MIR SINE MIR 13 191 -71 524 279 135 50 chr20 59640642 59641004 -7027001 + MLT1L LTR MaLR 142 534 -81 1912 144 3 6 chr20 59641431 59641744 -7026261 + AluSx SINE Alu 1 312 0 730 100 0 17 chr20 59641745 59641865 -7026140 + (GGAA)n Simple_repeat Simple_repeat 2 119 0 1707 174 0 10 chr20 59641993 59642304 -7025701 - AluJb SINE Alu -2 310 3 1003 209 47 15 chr20 59643048 59643349 -7024656 - MLT1A1 LTR MaLR 0 365 2 319 326 211 21 chr20 59643360 59643697 -7024308 + L2 LINE L2 2856 3256 -16 610 139 70 76 chr20 59643750 59643922 -7024083 + MER53 DNA DNA 19 189 0 715 197 102 102 chr20 59644409 59644714 -7023291 + MLT1B LTR MaLR 45 349 -41 565 168 5 200 chr20 59645504 59645656 -7022349 - MER5A DNA MER1_type -4 185 87 5424 87 26 1 chr20 59645656 59646394 -7021611 - L1PA10 LINE L1 -4 6164 5409 565 168 5 200 chr20 59646394 59646461 -7021544 - MER5A DNA MER1_type -102 87 9 210 317 58 33 chr20 59646571 59646691 -7021314 - L2 LINE L2 -6 3266 3144 * 230 299 56 19 chr20 59646688 59646795 -7021210 + L2 LINE L2 2634 2744 -570 551 318 29 18 chr20 59647114 59647351 -7020654 + MIR SINE MIR 15 259 -3 236 235 255 10 chr20 59647916 59648018 -7019987 + L2 LINE L2 3185 3311 -2 281 264 68 68 chr20 59648051 59648611 -7019394 + L1M4 LINE L1 2673 3232 -2914 272 86 0 0 chr20 59648669 59648704 -7019301 - U2 snRNA snRNA -153 35 1 262 287 32 45 chr20 59648799 59648956 -7019049 + L1M4 LINE L1 4457 4611 -1535 681 126 45 0 chr20 59650302 59650413 -7017592 + LTR45B LTR ERV1 3 118 -371 291 213 16 0 chr20 59651098 59651159 -7016846 - MIR SINE MIR -92 170 109 491 237 104 0 chr20 59651725 59651860 -7016145 + MER63 DNA MER1_type 1 775 -287 426 228 136 54 chr20 59651931 59652115 -7015890 + LTR16C LTR ERVL 289 487 -4 478 333 64 55 chr20 59652686 59653013 -7014992 + L2 LINE L2 2921 3250 -22 396 55 0 0 chr20 59653027 59653082 -7014923 + (TTCA)n Simple_repeat Simple_repeat 3 57 0 317 265 166 60 chr20 59653297 59653383 -7014622 - MER5A DNA MER1_type -9 180 105 2181 92 0 0 chr20 59653383 59653697 -7014308 - AluSg SINE Alu 0 314 1 317 265 166 60 chr20 59653697 59653760 -7014245 - MER5A DNA MER1_type -84 105 14 364 194 82 20 chr20 59654087 59654185 -7013820 + MER113 DNA MER1_type? 307 410 -111 2212 104 3 0 chr20 59654185 59654493 -7013512 + AluSx SINE Alu 1 309 -3 1126 253 162 2 chr20 59655642 59656050 -7011955 + MLT2B2 LTR ERVL 2 474 -41 553 301 70 10 chr20 59656347 59656546 -7011459 + MIR SINE MIR 7 217 -45 718 229 148 33 chr20 59656707 59657039 -7010966 + L1ME4a LINE L1 5685 6054 -67 2519 50 0 0 chr20 59657106 59657407 -7010598 + AluY SINE Alu 2 302 -9 380 169 78 0 chr20 59657983 59658060 -7009945 + MLT1I LTR MaLR 327 409 0 1762 203 31 21 chr20 59658511 59658895 -7009110 - MLT1B LTR MaLR 0 390 3 984 242 131 26 chr20 59659214 59659520 -7008485 + MLT1I LTR MaLR 72 409 0 1634 189 105 12 chr20 59660173 59660507 -7007498 + MLT1A1 LTR MaLR 1 365 0 4499 231 125 19 chr20 59660527 59662037 -7005968 + MLT1A1-int LTR MaLR 23 1729 -6 1415 219 49 6 chr20 59662049 59662396 -7005609 + MLT1A1 LTR MaLR 4 365 0 368 264 90 38 chr20 59662561 59662773 -7005232 + LTR16A1 LTR ERVL 161 383 -74 252 288 27 0 chr20 59662825 59662898 -7005107 + L2 LINE L2 3197 3271 -1 2191 101 0 0 chr20 59662914 59663211 -7004794 - AluSx SINE Alu -15 297 1 180 0 0 0 chr20 59663439 59663459 -7004546 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 545 234 29 101 chr20 59663975 59664184 -7003821 - MER102a DNA MER1_type -8 322 129 571 241 0 0 chr20 59664445 59664553 -7003452 - MER81 DNA DNA -5 109 2 297 167 17 0 chr20 59664849 59664909 -7003096 + MLT1J2 LTR MaLR 384 444 -6 1551 174 56 22 chr20 59665097 59665520 -7002485 + MLT1B LTR MaLR 7 467 0 227 220 68 34 chr20 59665788 59665847 -7002158 + LSAU Satellite Satellite 360 420 -78 390 266 181 25 chr20 59666746 59666945 -7001060 + MIR SINE MIR 33 262 0 907 304 43 6 chr20 59667052 59667161 -7000844 + MER58B DNA MER1_type 2 106 -2314 1964 132 7 0 chr20 59667161 59667465 -7000540 + AluSx SINE Alu 4 309 -3 907 304 43 6 chr20 59667465 59667681 -7000324 + MER58B DNA MER1_type 106 339 -2 316 326 24 42 chr20 59667845 59668044 -6999961 + MIR SINE MIR 4 203 -59 4684 232 46 65 chr20 59668192 59670167 -6997838 + L1MC3 LINE L1 4 2016 -4925 1180 193 34 120 chr20 59670167 59670576 -6997429 - MLT1A2 LTR MaLR 0 374 1 4684 232 46 65 chr20 59670576 59672380 -6995625 + L1MC3 LINE L1 2016 4315 -2626 715 163 8 0 chr20 59672380 59672503 -6995502 + FLAM_C SINE Alu 17 140 -3 4684 232 46 65 chr20 59672503 59672976 -6995029 + L1MC3 LINE L1 4315 4796 -2145 1653 180 0 13 chr20 59672982 59673287 -6994718 + AluJo SINE Alu 1 301 -11 240 122 0 0 chr20 59673297 59673338 -6994667 + (GGA)n Simple_repeat Simple_repeat 2 42 0 1375 257 15 17 chr20 59673348 59673596 -6994409 + L1MC3 LINE L1 4795 5043 -1898 2118 111 0 3 chr20 59673596 59673893 -6994112 + AluSc SINE Alu 1 296 -13 1375 257 15 17 chr20 59673893 59674048 -6993957 + L1MC3 LINE L1 5043 5197 -1744 1588 129 139 19 chr20 59674054 59674371 -6993634 + L1MA7 LINE L1 5937 6291 0 * 6938 194 60 23 chr20 59674369 59675151 -6992854 + L1MC3 LINE L1 5140 4750 -2191 1955 97 32 0 chr20 59675151 59675429 -6992576 + AluSg SINE Alu 16 302 -8 6938 194 60 23 chr20 59675429 59676935 -6991070 + L1MC3 LINE L1 4749 6198 -743 523 284 35 88 chr20 59676949 59677234 -6990771 - L2 LINE L2 -122 3191 2922 594 275 50 6 chr20 59677345 59677527 -6990478 - LTR16A1 LTR ERVL -94 363 174 1186 249 84 65 chr20 59678079 59678945 -6989060 + L1MDa LINE L1 1013 1895 -4645 387 328 17 0 chr20 59679225 59679341 -6988664 - MIR SINE MIR -107 155 38 1990 94 84 0 chr20 59679512 59679799 -6988206 - AluSx SINE Alu -1 311 1 243 0 0 0 chr20 59679832 59679859 -6988146 + (CA)n Simple_repeat Simple_repeat 2 28 0 274 216 20 0 chr20 59680482 59680533 -6987472 - L2 LINE L2 0 3272 3221 323 261 98 0 chr20 59680541 59680633 -6987372 + L2 LINE L2 3213 3313 0 225 234 0 0 chr20 59680649 59680713 -6987292 + (TGGA)n Simple_repeat Simple_repeat 3 66 0 344 310 26 17 chr20 59682490 59682606 -6985399 + MIR SINE MIR 36 152 -56 1501 181 50 0 chr20 59684878 59685159 -6982846 + AluJo SINE Alu 1 295 -17 663 237 132 22 chr20 59685301 59685634 -6982371 - MER113 DNA MER1_type? -120 401 6 308 322 114 44 chr20 59685842 59686140 -6981865 - L1 LINE L1 -856 5290 4972 37 23 0 0 chr20 59686447 59686491 -6981514 + AT_rich Low_complexity Low_complexity 1 44 0 2300 90 0 31 chr20 59686494 59686816 -6981189 + AluSx SINE Alu 1 312 0 2033 179 109 2 chr20 59686832 59687234 -6980771 + L1MC1 LINE L1 5485 5929 -404 935 126 0 14 chr20 59687300 59687443 -6980562 + L1MC1 LINE L1 6188 6328 -5 22 35 0 0 chr20 59688629 59688658 -6979347 + AT_rich Low_complexity Low_complexity 1 29 0 491 257 137 39 chr20 59689423 59689861 -6978144 - L2 LINE L2 0 3272 2763 228 122 0 0 chr20 59690379 59690420 -6977585 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 345 240 0 0 chr20 59690947 59691022 -6976983 + HsTC2 DNA Tc2 4 78 -1820 216 269 222 9 chr20 59691548 59691656 -6976349 + MIR SINE MIR 123 253 -9 326 313 54 12 chr20 59692183 59692349 -6975656 - MIR SINE MIR -43 219 47 1467 213 81 36 chr20 59692684 59693126 -6974879 - MLT1C LTR MaLR 0 467 6 688 251 145 108 chr20 59693410 59694163 -6973842 + MER20B DNA MER1_type 1 781 -2 492 285 98 19 chr20 59695605 59695819 -6972186 + MLT1K LTR MaLR 358 588 0 206 202 107 71 chr20 59696987 59697071 -6970934 + L2 LINE L2 3209 3295 -18 540 294 121 6 chr20 59697279 59697478 -6970527 + MIR SINE MIR 37 262 0 21 36 0 0 chr20 59698536 59698564 -6969441 + AT_rich Low_complexity Low_complexity 1 28 0 325 143 0 0 chr20 59699149 59699198 -6968807 - MER53 DNA DNA -135 54 6 2712 134 26 0 chr20 59699758 59700175 -6967830 - MSTA LTR MaLR 0 428 1 384 340 31 12 chr20 59700608 59700770 -6967235 - MIR SINE MIR -91 171 7 430 290 123 58 chr20 59701062 59701476 -6966529 + L2 LINE L2 2872 3312 -1 634 260 104 22 chr20 59702433 59702848 -6965157 + L1ME3A LINE L1 5666 6154 -16 2066 92 0 7 chr20 59703585 59703892 -6964113 - AluSg1 SINE Alu 0 305 1 421 246 102 6 chr20 59704178 59704345 -6963660 + MER113 DNA MER1_type? 8 190 -331 330 226 11 21 chr20 59704412 59704505 -6963500 + L2 LINE L2 2945 3036 -236 278 296 10 10 chr20 59704520 59704618 -6963387 + MER33 DNA MER1_type 36 133 -191 1862 98 73 7 chr20 59704638 59704925 -6963080 + AluSq SINE Alu 1 306 -7 289 222 0 28 chr20 59704930 59705002 -6963003 + MER33 DNA MER1_type 272 341 -22 556 259 15 0 chr20 59705260 59705395 -6962610 - MER96 DNA MER1_type? 0 175 39 394 258 107 31 chr20 59705964 59706123 -6961882 - MIR SINE MIR -19 243 73 192 292 15 15 chr20 59706172 59706237 -6961768 + MIR SINE MIR 118 182 -80 378 250 80 89 chr20 59706336 59706560 -6961445 - Charlie8 DNA MER1_type -998 1419 100 1799 162 7 0 chr20 59706977 59707285 -6960720 - AluJo SINE Alu -2 310 1 449 265 52 38 chr20 59708042 59708213 -6959792 + MIR SINE MIR 3 172 -57 408 317 59 34 chr20 59708460 59708832 -6959173 - L2 LINE L2 -236 3036 2648 189 0 0 0 chr20 59709153 59709174 -6958831 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 319 340 57 21 chr20 59709405 59709546 -6958459 - MIR SINE MIR -41 221 76 513 242 26 47 chr20 59709667 59709857 -6958148 - L1ME4a LINE L1 -204 5917 5732 182 322 113 17 chr20 59710512 59710549 -6957456 + L2 LINE L2 2584 2616 -698 2287 72 3 0 chr20 59710549 59710842 -6957163 + AluY SINE Alu 1 294 -17 182 322 113 17 chr20 59710842 59710919 -6957086 + L2 LINE L2 2616 2709 -605 517 292 49 49 chr20 59711116 59711359 -6956646 - L1MC4a LINE L1 -1973 5835 5593 195 42 0 0 chr20 59711360 59711384 -6956621 + (T)n Simple_repeat Simple_repeat 1 24 0 2065 140 3 0 chr20 59711413 59711720 -6956285 + AluSx SINE Alu 1 308 -4 240 254 0 0 chr20 59711774 59711837 -6956168 - L1MC4a LINE L1 -2338 5470 5408 1628 230 17 68 chr20 59714704 59715187 -6952818 + MLT1C LTR MaLR 8 465 -2 1009 241 66 13 chr20 59717051 59717354 -6950651 - MER46C DNA MER2_type -16 322 4 544 267 34 14 chr20 59717427 59717573 -6950432 - MLT1K LTR MaLR -8 580 432 282 289 88 49 chr20 59717619 59717982 -6950023 - MLT1L LTR MaLR -14 601 181 515 313 113 37 chr20 59718077 59718403 -6949602 - MLT1K LTR MaLR -224 364 14 682 231 28 22 chr20 59718500 59718703 -6949302 + MLT1E LTR MaLR 1 249 -346 270 160 0 0 chr20 59718703 59718753 -6949252 + CT-rich Low_complexity Low_complexity 1 50 0 248 242 121 33 chr20 59718764 59718855 -6949150 + MLT1F1 LTR MaLR 188 286 -281 325 264 23 31 chr20 59719113 59719242 -6948763 + MIR SINE MIR 19 146 -116 735 215 79 6 chr20 59720289 59720643 -6947362 + LTR52 LTR ERVL 1 406 -15 307 293 76 19 chr20 59720679 59720836 -6947169 - MIR SINE MIR -68 194 29 2078 233 47 8 chr20 59721090 59721583 -6946422 + MLT1E2 LTR MaLR 111 622 -4 1019 192 24 17 chr20 59721601 59721980 -6946025 + LTR40c LTR ERVL 56 458 -4 256 323 42 10 chr20 59722183 59722279 -6945726 + L2 LINE L2 3173 3271 -1 638 250 0 0 chr20 59722372 59722500 -6945505 + FLAM_A SINE Alu 1 128 -5 638 106 19 0 chr20 59722505 59722609 -6945396 + (TAGA)n Simple_repeat Simple_repeat 1 106 0 359 355 66 14 chr20 59722621 59723047 -6944958 - Tigger8 DNA MER2_type -6 660 213 548 307 52 63 chr20 59723197 59723562 -6944443 - Charlie8 DNA MER1_type -1968 449 89 1808 143 7 10 chr20 59723595 59723888 -6944117 + AluJb SINE Alu 1 292 -20 436 224 20 0 chr20 59723959 59724057 -6943948 + L2 LINE L2 2266 2365 -949 461 246 27 9 chr20 59724368 59724478 -6943527 - MLT1I LTR MaLR -227 182 71 705 260 43 10 chr20 59724605 59724813 -6943192 + MER58A DNA MER1_type 9 223 -1 1778 143 50 13 chr20 59724859 59725160 -6942845 + AluSx SINE Alu 1 312 0 262 242 57 84 chr20 59725363 59725584 -6942421 - Charlie8 DNA MER1_type -1025 1392 97 639 199 121 18 chr20 59725755 59725921 -6942084 + L1MB5 LINE L1 5808 5990 -184 613 170 0 0 chr20 59725944 59726044 -6941961 + L1MB5 LINE L1 6066 6165 -9 904 246 67 0 chr20 59726356 59726596 -6941409 + L1ME3A LINE L1 5885 6140 -30 476 303 17 6 chr20 59727433 59727611 -6940394 + GA-rich Low_complexity Low_complexity 1 180 0 345 241 143 9 chr20 59728815 59728927 -6939078 - MIR SINE MIR -9 253 127 246 293 24 12 chr20 59730691 59730773 -6937232 + MIR SINE MIR 166 248 -14 461 248 91 5 chr20 59730832 59731092 -6936913 - LTR16C LTR ERVL -20 471 165 1368 175 46 99 chr20 59732283 59732498 -6935507 + MER96B DNA MER1_type? 42 228 -189 1808 131 33 13 chr20 59732498 59732804 -6935201 + AluJb SINE Alu 1 312 0 1368 175 46 99 chr20 59732804 59732983 -6935022 + MER96B DNA MER1_type? 228 415 -2 749 181 77 6 chr20 59733081 59733263 -6934742 + MLT1D LTR MaLR 299 493 -12 2333 90 3 0 chr20 59733288 59733598 -6934407 - AluSx SINE Alu 0 312 2 753 229 192 40 chr20 59733698 59734000 -6934005 - MLT1D LTR MaLR 0 505 158 553 221 34 20 chr20 59734385 59734534 -6933471 - MLT1D LTR MaLR -352 153 3 309 269 64 16 chr20 59734585 59734713 -6933292 + MIR SINE MIR 18 153 -55 530 305 23 6 chr20 59734809 59734983 -6933022 + MIR SINE MIR 38 214 -48 23 0 0 0 chr20 59735299 59735322 -6932683 + AT_rich Low_complexity Low_complexity 1 23 0 236 137 20 0 chr20 59735446 59735497 -6932508 + (TA)n Simple_repeat Simple_repeat 1 52 0 890 278 56 56 chr20 59735633 59736011 -6931994 + MLT2C1 LTR ERVL 20 397 0 863 248 188 40 chr20 59736336 59736756 -6931249 - MLT1H1 LTR MaLR -42 513 32 2165 185 38 34 chr20 59736790 59737293 -6930712 + MLT1D LTR MaLR 1 505 0 223 354 18 9 chr20 59737728 59737841 -6930164 + MIR SINE MIR 20 133 -129 258 206 0 0 chr20 59737910 59737973 -6930032 + (TG)n Simple_repeat Simple_repeat 2 64 0 390 290 163 18 chr20 59738026 59738247 -6929758 + L2 LINE L2 2314 2566 -748 869 165 0 0 chr20 59738495 59738628 -6929377 + FLAM_C SINE Alu 1 133 0 582 318 60 42 chr20 59738700 59739103 -6928902 + HAL1 LINE L1 1926 2335 -172 2134 124 0 0 chr20 59739999 59740297 -6927708 + AluSx SINE Alu 1 298 -14 1225 244 88 103 chr20 59740485 59741084 -6926921 + MLT1E LTR MaLR 1 590 -3 2104 109 3 0 chr20 59741447 59741740 -6926265 - AluSc SINE Alu -15 294 1 1753 106 11 78 chr20 59741759 59742128 -6925877 - MER4A LTR ERV1 0 664 261 601 152 0 10 chr20 59742128 59742227 -6925778 - MER4A LTR ERV1 -566 98 1 955 250 57 89 chr20 59743208 59743340 -6924665 + MLT1K LTR MaLR 66 201 -387 2580 29 0 0 chr20 59743340 59743647 -6924358 + AluY SINE Alu 1 307 -4 955 250 57 89 chr20 59743647 59744054 -6923951 + MLT1K LTR MaLR 201 588 0 404 338 0 0 chr20 59744390 59744544 -6923461 + (CA)n Simple_repeat Simple_repeat 2 155 0 469 283 11 72 chr20 59746357 59746537 -6921468 - MLT1H LTR MaLR -245 304 136 599 278 23 17 chr20 59746554 59746727 -6921278 - MLT1H LTR MaLR -337 212 39 191 355 13 0 chr20 59746763 59746839 -6921166 + L2 LINE L2 2222 2298 -1016 344 342 112 6 chr20 59746871 59747032 -6920973 + L1ME4a LINE L1 5718 5895 -226 327 85 0 0 chr20 59747040 59747087 -6920918 + (CAGA)n Simple_repeat Simple_repeat 2 48 0 512 276 141 30 chr20 59747110 59747473 -6920532 - MLT1J LTR MaLR 0 511 109 1930 145 6 6 chr20 59747739 59748050 -6919955 + AluSx SINE Alu 1 311 -1 437 336 103 17 chr20 59748114 59748406 -6919599 + L2 LINE L2 2997 3313 0 245 300 17 58 chr20 59748476 59748596 -6919409 + LTR16B LTR ERVL 2 116 -348 1122 80 0 0 chr20 59748910 59749086 -6918919 + (CA)n Simple_repeat Simple_repeat 1 176 0 799 149 100 156 chr20 59749619 59749699 -6918306 - L1MB8 LINE L1 -26 6152 6069 1768 162 30 3 chr20 59749699 59749995 -6918010 + AluJb SINE Alu 1 304 -8 799 149 100 156 chr20 59749995 59750203 -6917802 - L1MB8 LINE L1 -109 6069 5880 200 323 143 39 chr20 59750457 59750736 -6917269 - L2 LINE L2 -340 2974 2667 180 213 43 21 chr20 59751201 59751248 -6916757 - MER5B DNA MER1_type -45 133 86 1949 111 11 0 chr20 59752639 59752919 -6915086 - AluSx SINE Alu -1 311 29 216 190 103 0 chr20 59752921 59752979 -6915026 - MER5A DNA MER1_type -120 69 6 256 259 17 43 chr20 59753248 59753364 -6914641 + L1MC4 LINE L1 6965 7077 -965 2453 54 0 0 chr20 59753364 59753661 -6914344 + AluY SINE Alu 1 297 -14 395 286 16 50 chr20 59753663 59753845 -6914160 + L1MC5 LINE L1 7044 7219 -742 * 2413 229 63 58 chr20 59753836 59754596 -6913409 + L1MB7 LINE L1 5397 6163 -21 1981 126 13 10 chr20 59754596 59754897 -6913108 - AluSq SINE Alu -11 302 1 2413 229 63 58 chr20 59754897 59754919 -6913086 + L1MB7 LINE L1 6163 6183 -1 1081 186 67 46 chr20 59754925 59755125 -6912880 + L1MB3 LINE L1 5893 6102 -81 2394 78 0 3 chr20 59755125 59755433 -6912572 - AluSx SINE Alu -5 307 1 1081 186 67 46 chr20 59755433 59755517 -6912488 + L1MB3 LINE L1 6102 6183 0 227 245 0 0 chr20 59755887 59755936 -6912069 + L1MC4 LINE L1 7600 7648 -394 1549 218 137 24 chr20 59756029 59756483 -6911522 + MLT1D LTR MaLR 1 505 0 2248 83 0 3 chr20 59756559 59756860 -6911145 + THE1B LTR MaLR 1 300 -64 328 205 233 2 chr20 59756852 59756954 -6911051 + MLT1D LTR MaLR 269 503 -2 * 227 356 144 5 chr20 59757132 59757340 -6910665 + L2 LINE L2 2560 2796 -518 200 285 17 62 chr20 59757524 59757703 -6910302 + C-rich Low_complexity Low_complexity 1 171 0 2228 96 0 0 chr20 59760089 59760390 -6907615 + AluSx SINE Alu 1 301 -11 2979 146 53 28 chr20 59760530 59760896 -6907109 + MER7C DNA MER2_type 21 407 -2621 3429 119 58 0 chr20 59760896 59761392 -6906613 - MER1A DNA MER1_type 0 527 3 2979 146 53 28 chr20 59761392 59761593 -6906412 + MER7C DNA MER2_type 407 602 0 340 263 20 0 chr20 59762695 59762794 -6905211 + MIR SINE MIR 58 158 -104 564 167 69 56 chr20 59762808 59762952 -6905053 + MER5A DNA MER1_type 38 183 -6 1486 174 27 10 chr20 59763098 59763391 -6904614 - AluJb SINE Alu -6 306 9 2617 153 45 43 chr20 59763428 59763730 -6904275 + L1MB5 LINE L1 5598 5903 -271 2010 133 0 0 chr20 59763730 59764023 -6903982 + AluSx SINE Alu 3 295 -17 2617 153 45 43 chr20 59764023 59764237 -6903768 + L1MB5 LINE L1 5903 6115 -59 1622 147 42 35 chr20 59764281 59764567 -6903438 + AluJb SINE Alu 1 288 -24 317 271 183 85 chr20 59764617 59764983 -6903022 - L1MC4a LINE L1 -1779 6029 5628 306 73 0 0 chr20 59765095 59765136 -6902869 + (CA)n Simple_repeat Simple_repeat 1 41 0 216 0 0 0 chr20 59765844 59765868 -6902137 + (TAA)n Simple_repeat Simple_repeat 2 25 0 221 279 45 45 chr20 59765937 59766048 -6901957 - MIR SINE MIR -81 127 17 191 323 21 21 chr20 59766159 59766252 -6901753 - MIR SINE MIR -71 137 45 691 315 36 10 chr20 59766254 59766556 -6901449 + MER113 DNA MER1_type? 212 521 0 2428 62 0 0 chr20 59766998 59767305 -6900700 - AluY SINE Alu -4 307 1 2237 100 0 0 chr20 59769328 59769627 -6898378 + AluSg SINE Alu 1 299 -11 337 267 97 42 chr20 59771514 59771679 -6896326 + L2 LINE L2 3121 3294 -19 312 48 0 0 chr20 59772661 59772703 -6895302 + (GA)n Simple_repeat Simple_repeat 2 43 0 414 0 0 0 chr20 59772863 59772909 -6895096 + (TG)n Simple_repeat Simple_repeat 2 47 0 1391 106 0 20 chr20 59772914 59773112 -6894893 - AluSx SINE Alu -118 194 1 204 265 0 0 chr20 59774387 59774436 -6893569 + G-rich Low_complexity Low_complexity 4 52 0 740 236 42 38 chr20 59775846 59776001 -6892004 - MER20 DNA MER1_type -2 217 59 1772 164 7 0 chr20 59776001 59776294 -6891711 + AluJb SINE Alu 1 295 -17 740 236 42 38 chr20 59776294 59776350 -6891655 - MER20 DNA MER1_type -160 59 5 264 253 67 0 chr20 59776597 59776672 -6891333 - MIR SINE MIR -74 188 109 39 60 0 0 chr20 59780762 59780829 -6887176 + GC_rich Low_complexity Low_complexity 1 67 0 21 0 0 0 chr20 59782279 59782300 -6885705 + AT_rich Low_complexity Low_complexity 1 21 0 480 260 24 24 chr20 59785211 59785338 -6882667 + MIR SINE MIR 16 142 -120 277 273 76 70 chr20 59785564 59785736 -6882269 - MIR SINE MIR -55 207 35 188 379 10 10 chr20 59785848 59785951 -6882054 - MIR SINE MIR -22 240 138 448 136 12 0 chr20 59785952 59786033 -6881972 - L1PB2 LINE L1 -100 6051 5970 308 200 0 31 chr20 59786372 59786437 -6881568 + L1MC5 LINE L1 7845 7907 -54 306 250 92 0 chr20 59786505 59786581 -6881424 + MIR3 SINE MIR 77 159 -49 1109 111 0 0 chr20 59786622 59786775 -6881230 - AluSg/x SINE Alu -12 298 146 227 329 51 0 chr20 59787143 59787222 -6880783 + L2 LINE L2 3231 3313 0 252 325 51 34 chr20 59787233 59787350 -6880655 + MIR3 SINE MIR 86 204 -4 207 88 0 0 chr20 59788470 59788504 -6879501 + (CAA)n Simple_repeat Simple_repeat 2 35 0 211 293 101 20 chr20 59791080 59791179 -6876826 + MIR3 SINE MIR 50 156 -52 240 306 0 0 chr20 59796288 59796350 -6871655 + (CA)n Simple_repeat Simple_repeat 1 62 0 279 0 0 0 chr20 59796507 59796538 -6871467 + (CA)n Simple_repeat Simple_repeat 2 32 0 1776 123 0 8 chr20 59800515 59800830 -6867175 - AluSx SINE Alu 0 341 29 1191 166 60 71 chr20 59801117 59801467 -6866538 + LTR37A LTR ERV1 79 424 -2 2252 84 10 26 chr20 59801629 59801965 -6866040 + AluSg SINE Alu 5 335 0 320 233 39 58 chr20 59802153 59802256 -6865749 - L2 LINE L2 -13 3259 3159 350 221 87 19 chr20 59802493 59802597 -6865408 - MER5B DNA MER1_type -1 177 67 402 287 47 8 chr20 59804323 59804452 -6863553 - MIR SINE MIR -58 204 71 213 39 0 0 chr20 59804530 59804556 -6863449 + (A)n Simple_repeat Simple_repeat 1 26 0 5288 159 37 5 chr20 59804651 59806254 -6861751 + L1PB3 LINE L1 4124 5782 -372 1211 157 28 5 chr20 59806254 59806470 -6861535 + AluJo SINE Alu 87 307 -5 212 116 23 0 chr20 59806470 59806494 -6861511 + (TA)n Simple_repeat Simple_repeat 1 28 -16 2581 110 0 13 chr20 59806494 59806875 -6861130 + L1PB3 LINE L1 5775 6150 -4 212 116 23 0 chr20 59806875 59806893 -6861112 + (TA)n Simple_repeat Simple_repeat 28 44 0 1006 223 89 87 chr20 59806923 59807430 -6860575 + L1ME LINE L1 344 851 -5219 486 245 61 20 chr20 59807432 59807579 -6860426 + L1ME LINE L1 11 163 -5907 1835 267 59 50 chr20 59807590 59808931 -6859074 + L1ME LINE L1 347 1761 -4500 2259 140 83 15 chr20 59808931 59809330 -6858675 + MSTA LTR MaLR 3 428 0 1835 267 59 50 chr20 59809330 59809415 -6858590 + L1ME LINE L1 1761 1844 -4417 840 236 90 10 chr20 59809441 59809865 -6858140 + L1ME LINE L1 1972 2387 -3693 * 2061 241 88 7 chr20 59809856 59810557 -6857448 + L1ME LINE L1 2935 3692 -2388 2100 218 115 15 chr20 59810587 59811171 -6856834 + L1MC4 LINE L1 7207 7848 -194 21 36 0 0 chr20 59811191 59811219 -6856786 + AT_rich Low_complexity Low_complexity 1 28 0 299 213 8 197 chr20 59811219 59811473 -6856532 + L1MC4 LINE L1 7837 8042 0 368 242 25 25 chr20 59811526 59811646 -6856359 + GA-rich Low_complexity Low_complexity 3 122 0 375 282 94 55 chr20 59812406 59812587 -6855418 - L2 LINE L2 0 3272 3085 1016 71 0 0 chr20 59815026 59815152 -6852853 - L1PA6 LINE L1 -237 5917 5792 1606 60 0 0 chr20 59815152 59815346 -6852659 + L1PA5 LINE L1 5956 6154 0 233 269 43 85 chr20 59816077 59816218 -6851787 + L2 LINE L2 3138 3272 0 202 391 0 18 chr20 59816751 59816861 -6851144 - L2 LINE L2 -607 2707 2600 959 249 175 32 chr20 59817213 59817654 -6850351 + MLT1D LTR MaLR 2 505 0 627 286 56 0 chr20 59818487 59818718 -6849287 + MIR SINE MIR 13 256 -6 209 250 214 9 chr20 59819867 59819979 -6848026 - L2 LINE L2 -4 3268 3134 252 0 0 0 chr20 59821755 59821783 -6846222 + (CA)n Simple_repeat Simple_repeat 1 28 0 478 30 0 30 chr20 59821856 59821922 -6846083 + L1PA6 LINE L1 6091 6154 0 1707 236 39 123 chr20 59821937 59822932 -6845073 + L1MC5 LINE L1 6917 7811 -150 2254 128 0 0 chr20 59822932 59823238 -6844767 - AluSx SINE Alu -6 306 1 1707 236 39 123 chr20 59823238 59823350 -6844655 + L1MC5 LINE L1 7811 7931 -30 28 0 0 0 chr20 59823692 59823720 -6844285 + AT_rich Low_complexity Low_complexity 1 28 0 2826 220 64 12 chr20 59826154 59827106 -6840899 + L1ME1 LINE L1 1627 2592 -3623 1577 173 121 39 chr20 59827121 59827584 -6840421 + L1ME1 LINE L1 4891 5391 -824 636 194 62 38 chr20 59827589 59827749 -6840256 + L1MB8 LINE L1 5686 5849 -335 180 0 0 0 chr20 59827763 59827783 -6840222 + (A)n Simple_repeat Simple_repeat 1 20 0 649 107 0 0 chr20 59827787 59827871 -6840134 - FRAM SINE Alu -33 143 60 1711 172 6 15 chr20 59827871 59828203 -6839802 + L1MB8 LINE L1 5844 6172 -6 262 182 141 10 chr20 59828211 59828310 -6839695 + L1ME1 LINE L1 5384 5495 -736 1919 158 0 3 chr20 59828311 59828609 -6839396 + AluJb SINE Alu 1 297 -15 1212 176 16 20 chr20 59828611 59828855 -6839150 + L1MD3 LINE L1 7657 7899 -96 746 233 36 72 chr20 59828857 59829080 -6838925 - MER20 DNA MER1_type -4 215 1 358 214 11 11 chr20 59829085 59829174 -6838831 + L1MD1 LINE L1 6146 6234 -8 2574 210 61 29 chr20 59829198 59829934 -6838071 + L1ME1 LINE L1 5483 6403 0 314 282 81 81 chr20 59830879 59831051 -6836954 + L1ME4a LINE L1 5735 5909 -212 2383 104 0 0 chr20 59831051 59831358 -6836647 - AluSc SINE Alu -2 307 1 314 282 81 81 chr20 59831358 59831419 -6836586 + L1ME4a LINE L1 5908 5968 -153 1962 126 0 0 chr20 59831606 59831876 -6836129 + AluSx SINE Alu 41 310 -2 346 230 38 7 chr20 59832276 59832378 -6835627 + L1MC2 LINE L1 6244 7785 0 2932 231 68 45 chr20 59832397 59833244 -6834761 + L1ME LINE L1 1651 2477 -3738 1900 112 112 0 chr20 59833244 59833520 -6834485 + AluSx SINE Alu 1 307 -5 2932 231 68 45 chr20 59833520 59834430 -6833575 + L1ME LINE L1 2477 3410 -2805 225 301 0 0 chr20 59834423 59834496 -6833509 + L1MC5 LINE L1 7161 7233 -728 * 647 182 146 123 chr20 59834583 59835111 -6832894 + L1MC5 LINE L1 7238 7777 -184 1216 275 85 32 chr20 59835164 59835669 -6832336 + L1ME LINE L1 4548 5079 -1136 1085 153 79 50 chr20 59835821 59836062 -6831943 + AluJo SINE Alu 65 312 0 1165 247 37 47 chr20 59836066 59836445 -6831560 + L1ME LINE L1 5221 5599 -640 2011 111 46 7 chr20 59836445 59836725 -6831280 + AluSx SINE Alu 1 291 -21 1165 247 37 47 chr20 59836725 59836918 -6831087 + L1ME LINE L1 5599 5792 -447 2589 71 0 0 chr20 59837306 59837615 -6830390 - AluY SINE Alu -2 309 1 2292 108 0 7 chr20 59839244 59839550 -6828455 - AluSx SINE Alu -8 304 1 247 292 18 44 chr20 59839604 59839717 -6828288 + MIR SINE MIR 25 134 -128 440 274 80 11 chr20 59840404 59840579 -6827426 - MIR SINE MIR 0 262 76 2255 110 7 0 chr20 59841003 59841304 -6826701 + AluSx SINE Alu 1 303 -9 1639 207 0 7 chr20 59842678 59842983 -6825022 + AluJo SINE Alu 1 303 -9 1917 218 36 68 chr20 59843097 59843763 -6824242 + L1ME LINE L1 432 1076 -5129 1153 282 74 56 chr20 59843754 59844006 -6823999 + L1ME LINE L1 1299 1545 -4851 * 1783 25 0 5 chr20 59844006 59844205 -6823800 - AluY SINE Alu -5 306 109 1153 282 74 56 chr20 59844205 59844671 -6823334 + L1ME LINE L1 1545 2030 -4366 721 169 65 0 chr20 59844685 59844809 -6823196 - FLAM_A SINE Alu 0 133 2 2443 86 3 0 chr20 59844809 59845111 -6822894 - AluSp SINE Alu -10 303 1 181 162 0 54 chr20 59845189 59845226 -6822779 + L2 LINE L2 3261 3295 -18 667 231 129 16 chr20 59845937 59846193 -6821812 - MER113 DNA MER1_type? -73 448 164 937 169 40 67 chr20 59846785 59847010 -6820995 - MER20 DNA MER1_type 0 219 1 384 263 214 15 chr20 59847067 59847329 -6820676 + L2 LINE L2 2810 3123 -190 1404 201 58 4 chr20 59847603 59847877 -6820128 + AluJo SINE Alu 1 289 -23 1909 103 107 0 chr20 59847906 59848178 -6819827 + AluSx SINE Alu 1 301 -11 885 113 16 0 chr20 59849033 59849157 -6818848 + AluJb SINE Alu 161 286 -26 2167 99 0 62 chr20 59851246 59851568 -6816437 - AluSq SINE Alu -11 302 1 1378 268 49 8 chr20 59851926 59852277 -6815728 - L1ME3A LINE L1 -103 6067 5690 2173 87 14 0 chr20 59852277 59852564 -6815441 + AluSc SINE Alu 1 291 -18 1378 268 49 8 chr20 59852564 59852670 -6815335 - L1ME3A LINE L1 -480 5690 5590 237 378 28 0 chr20 59852924 59853067 -6814938 + L2 LINE L2 1830 1976 -1338 395 248 91 40 chr20 59853705 59853903 -6814102 + L2 LINE L2 2699 2906 -408 548 313 0 0 chr20 59854122 59854256 -6813749 + L2 LINE L2 3139 3272 0 522 179 57 0 chr20 59854286 59854392 -6813613 + MIR SINE MIR 8 119 -143 2319 122 0 0 chr20 59854854 59855158 -6812847 - AluSx SINE Alu -8 304 1 895 238 104 0 chr20 59855875 59856077 -6811928 + MER58A DNA MER1_type 2 224 0 633 263 97 41 chr20 59856791 59857205 -6810800 - L1MC5 LINE L1 -48 7913 7477 2487 68 0 0 chr20 59857887 59858183 -6809822 + AluY SINE Alu 1 296 -15 336 242 81 0 chr20 59858213 59858312 -6809693 + MIR SINE MIR 66 172 -90 320 256 88 24 chr20 59858428 59858553 -6809452 - MIR SINE MIR -72 190 58 330 222 107 20 chr20 59858991 59859259 -6808746 + MLT1H LTR MaLR 212 595 0 640 294 52 24 chr20 59859484 59859736 -6808269 - MIR SINE MIR 0 262 4 1900 85 88 0 chr20 59859778 59860065 -6807940 - AluSg SINE Alu 0 310 1 2576 59 0 0 chr20 59860110 59860413 -6807592 + AluY SINE Alu 1 303 -8 184 285 109 58 chr20 59860606 59860743 -6807262 + L2 LINE L2 3119 3262 -10 333 240 0 97 chr20 59861608 59861804 -6806201 + G-rich Low_complexity Low_complexity 3 179 0 28 48 0 0 chr20 59861814 59861856 -6806149 + GC_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr20 59862120 59862143 -6805862 + GC_rich Low_complexity Low_complexity 1 23 0 2115 121 3 0 chr20 59864145 59864434 -6803571 - AluSq SINE Alu -23 290 1 1031 183 46 6 chr20 59864475 59864650 -6803355 - AluJb SINE Alu -49 263 82 2538 61 3 10 chr20 59864656 59864969 -6803036 - AluY SINE Alu 0 311 1 283 292 52 31 chr20 59865878 59865934 -6802071 - L2 LINE L2 -18 3295 3235 947 226 67 0 chr20 59865934 59866142 -6801863 + MER58A DNA MER1_type 1 222 -2 283 292 52 31 chr20 59866142 59866181 -6801824 - L2 LINE L2 -78 3235 3198 2035 130 0 49 chr20 59866220 59866544 -6801461 - AluSx SINE Alu -4 308 1 2400 98 0 0 chr20 59866738 59867044 -6800961 + AluSx SINE Alu 1 306 -6 189 281 140 51 chr20 59868136 59868314 -6799691 + L2 LINE L2 2836 3029 -243 519 226 88 88 chr20 59869202 59869283 -6798722 + MIR SINE MIR 22 102 -160 2289 102 0 0 chr20 59869283 59869576 -6798429 - AluSq SINE Alu -20 293 1 519 226 88 88 chr20 59869576 59869733 -6798272 + MIR SINE MIR 101 260 -2 2520 38 41 0 chr20 59869733 59870025 -6797980 - AluY SINE Alu -7 304 1 1515 166 33 46 chr20 59870030 59870337 -6797668 - AluJo SINE Alu -1 311 9 425 261 81 87 chr20 59870386 59870560 -6797445 - HAL1 LINE L1 -2 2505 2332 982 127 122 127 chr20 59870560 59870797 -6797208 + MER46A DNA MER2_type 1 236 0 425 261 81 87 chr20 59870797 59870955 -6797050 - HAL1 LINE L1 -175 2332 2175 603 289 61 15 chr20 59870981 59871178 -6796827 + MIR SINE MIR 36 241 -21 1490 241 45 0 chr20 59871514 59871895 -6796110 - L1MDa LINE L1 -1261 4819 4422 2582 219 71 77 chr20 59871903 59872956 -6795049 - L1MDa LINE L1 -2091 3989 2931 2063 122 0 17 chr20 59872956 59873089 -6794916 + AluSx SINE Alu 4 138 -174 2369 88 0 3 chr20 59873089 59873394 -6794611 + AluSc SINE Alu 1 304 -5 2063 122 0 17 chr20 59873394 59873555 -6794450 + AluSx SINE Alu 138 293 -19 2582 219 71 77 chr20 59873555 59873998 -6794007 - L1MDa LINE L1 -3149 2931 2354 1534 191 14 4 chr20 59873998 59874276 -6793729 - AluJb SINE Alu -30 282 2 2582 219 71 77 chr20 59874276 59874538 -6793467 - L1MDa LINE L1 -3726 2354 2092 260 157 20 0 chr20 59874573 59874624 -6793381 - Charlie5 DNA MER1_type -2518 94 43 710 257 90 3 chr20 59874651 59875000 -6793005 - L1MDa LINE L1 -4122 2139 1708 1473 269 96 68 chr20 59875000 59875815 -6792190 - L1ME LINE L1 -1340 4740 3866 730 213 0 22 chr20 59875815 59875951 -6792054 - FLAM_A SINE Alu 0 133 1 1473 269 96 68 chr20 59875951 59876557 -6791448 - L1ME LINE L1 -2214 3866 3279 1357 288 61 30 chr20 59876586 59876766 -6791239 - L1ME LINE L1 -2949 3131 2958 2518 66 0 0 chr20 59876766 59877068 -6790937 + AluSc SINE Alu 1 302 -7 2437 64 0 10 chr20 59877074 59877371 -6790634 + AluSc SINE Alu 2 295 -14 2283 101 0 0 chr20 59877376 59877673 -6790332 + AluSg SINE Alu 1 297 -13 1357 288 61 30 chr20 59877673 59878286 -6789719 - L1ME LINE L1 -3129 2951 2300 340 217 9 19 chr20 59878290 59878396 -6789609 - L1ME LINE L1 -3833 2247 2143 * 1491 203 60 76 chr20 59878391 59878904 -6789101 - L1ME2 LINE L1 -68 6096 5592 1183 201 104 44 chr20 59878909 59879204 -6788801 - L1ME2 LINE L1 -1889 4257 3932 684 178 119 0 chr20 59879204 59879322 -6788683 + FLAM_C SINE Alu 1 132 -1 1183 201 104 44 chr20 59879322 59879409 -6788596 - L1ME2 LINE L1 -2214 3932 3852 2093 202 133 4 chr20 59879417 59879883 -6788122 - MLT1F1 LTR MaLR -13 554 29 1330 257 148 14 chr20 59879932 59880373 -6787632 + L1MC4 LINE L1 7476 7991 -51 1815 155 21 7 chr20 59880373 59880657 -6787348 - AluJo SINE Alu -24 288 1 1330 257 148 14 chr20 59880657 59880709 -6787296 + L1MC4 LINE L1 7991 8035 -7 1162 271 74 59 chr20 59881051 59881236 -6786769 - L1ME LINE L1 -4578 1683 1502 2324 95 0 0 chr20 59881236 59881532 -6786473 - AluY SINE Alu -15 296 1 1162 271 74 59 chr20 59881532 59882060 -6785945 - L1ME LINE L1 -4759 1502 893 1634 206 32 41 chr20 59882060 59882404 -6785601 - MER2 DNA MER2_type -2 342 2 1162 271 74 59 chr20 59882404 59882787 -6785218 - L1ME LINE L1 -5368 893 517 391 309 57 106 chr20 59882945 59883210 -6784795 - L1ME LINE L1 -5543 527 276 637 283 164 45 chr20 59883226 59883646 -6784359 + L2 LINE L2 2832 3301 -12 305 266 119 14 chr20 59884297 59884440 -6783565 + L1MCc LINE L1 -520 4294966933 -6227 843 260 63 72 chr20 59884719 59885176 -6782829 + L1MCc LINE L1 1269 1729 -4655 2021 118 4 4 chr20 59885176 59885456 -6782549 + AluSx SINE Alu 1 280 -32 306 0 0 0 chr20 59885456 59885490 -6782515 + (TAAA)n Simple_repeat Simple_repeat 4 37 0 843 260 63 72 chr20 59885490 59885655 -6782350 + L1MCc LINE L1 1727 1738 -4646 591 225 47 75 chr20 59885698 59885951 -6782054 + L1MCc LINE L1 2049 2294 -4269 1245 228 0 12 chr20 59885952 59886207 -6781798 + AluJo SINE Alu 1 252 -60 21 0 0 0 chr20 59886207 59886228 -6781777 + AT_rich Low_complexity Low_complexity 1 21 0 2197 103 0 13 chr20 59886228 59886529 -6781476 + AluSq SINE Alu 1 297 -16 339 258 22 16 chr20 59886719 59886825 -6781180 + L1ME3 LINE L1 5980 6083 -81 476 191 77 71 chr20 59886842 59887010 -6780995 - L1M4 LINE L1 -1916 4230 4062 * 478 214 71 0 chr20 59887007 59887119 -6780886 + L1ME2 LINE L1 5462 5581 -583 1129 204 113 0 chr20 59887120 59887395 -6780610 + L1ME2 LINE L1 5668 5973 -191 279 254 9 45 chr20 59887446 59887556 -6780449 + L1MC4a LINE L1 5607 5712 -2096 323 331 71 49 chr20 59887557 59887865 -6780140 + L1MC4a LINE L1 5749 6063 -1745 2196 91 0 7 chr20 59888171 59888491 -6779514 - AluSx SINE Alu 0 318 1 1256 226 52 12 chr20 59889247 59889686 -6778319 - MLT1D LTR MaLR 0 505 15 338 264 209 41 chr20 59889888 59890108 -6777897 + MIR SINE MIR 6 262 0 2266 110 7 0 chr20 59890197 59890505 -6777500 - AluSq SINE Alu -3 310 1 277 293 92 67 chr20 59892813 59893096 -6774909 - L2 LINE L2 -84 3229 2940 208 232 116 29 chr20 59894380 59894449 -6773556 - L2 LINE L2 -5 3267 3193 182 273 91 0 chr20 59896419 59896463 -6771542 + L2 LINE L2 3215 3262 -10 596 312 105 39 chr20 59898160 59898981 -6769024 + L2 LINE L2 2407 3313 0 247 181 200 57 chr20 59899055 59899160 -6768845 + L2 LINE L2 3169 3288 -25 2384 85 0 0 chr20 59900124 59900417 -6767588 + AluSx SINE Alu 1 293 -19 1030 207 10 30 chr20 59900795 59900877 -6767128 + MER58A DNA MER1_type 26 108 -2312 1447 109 95 0 chr20 59900877 59901087 -6766918 + MER30 DNA MER1_type 1 230 0 1030 207 10 30 chr20 59901087 59901207 -6766798 + MER58A DNA MER1_type 108 224 0 521 268 141 42 chr20 59901330 59901643 -6766362 + L1ME LINE L1 350 693 -5679 1887 279 120 33 chr20 59901949 59902159 -6765846 + L1ME LINE L1 818 1008 -5555 794 203 0 0 chr20 59902159 59902292 -6765713 + FLAM_C SINE Alu 1 133 0 1887 279 120 33 chr20 59902292 59903239 -6764766 + L1ME LINE L1 1008 1872 -4691 1920 150 14 0 chr20 59903239 59903533 -6764472 + AluSx SINE Alu 3 300 -12 1887 279 120 33 chr20 59903533 59903711 -6764294 + L1ME LINE L1 1872 2033 -4530 2324 70 3 0 chr20 59903711 59903995 -6764010 + AluSp SINE Alu 1 285 -28 1887 279 120 33 chr20 59903995 59904214 -6763791 + L1ME LINE L1 2033 2623 -3940 264 304 87 7 chr20 59904234 59904372 -6763633 + L1ME1 LINE L1 5987 6135 -31 619 305 171 3 chr20 59906959 59907251 -6760754 - L2 LINE L2 0 3313 2973 246 297 199 14 chr20 59907391 59907677 -6760328 - MER102b DNA MER1_type -1 340 2 1544 187 7 30 chr20 59907719 59908019 -6759986 + AluJo SINE Alu 3 295 -17 2289 97 3 3 chr20 59908208 59908506 -6759499 + AluSq SINE Alu 1 298 -15 1086 273 118 67 chr20 59908698 59909768 -6758237 - L1ME3 LINE L1 -7 6155 5029 364 315 84 42 chr20 59910087 59910230 -6757775 - L2 LINE L2 -1 3271 3123 375 273 9 28 chr20 59910418 59910524 -6757481 + L1MC4a LINE L1 5509 5609 -633 759 257 76 42 chr20 59910599 59910792 -6757213 + L1MC4a LINE L1 5616 5824 -1984 2108 137 0 3 chr20 59910792 59911092 -6756913 + AluSx SINE Alu 1 299 -13 759 257 76 42 chr20 59911092 59911186 -6756819 + L1MC4a LINE L1 5824 5913 -1895 1153 202 65 0 chr20 59911426 59911674 -6756331 + L1MD3 LINE L1 7729 7992 -3 2350 103 7 0 chr20 59916904 59917214 -6750791 - AluSx SINE Alu 0 312 1 2346 69 0 10 chr20 59917839 59918127 -6749878 - AluSg SINE Alu -10 300 16 1327 166 34 27 chr20 59918509 59918804 -6749201 + L1MA4 LINE L1 6004 6300 0 308 296 21 36 chr20 59920249 59920413 -6747592 + MIR SINE MIR 18 176 -58 1143 246 102 47 chr20 59920565 59921029 -6746976 - L1ME3A LINE L1 0 6170 5733 207 0 0 0 chr20 59921029 59921052 -6746953 + (CA)n Simple_repeat Simple_repeat 2 24 0 1143 246 102 47 chr20 59921052 59921110 -6746895 - L1ME3A LINE L1 -437 5733 5680 2130 125 0 0 chr20 59921110 59921398 -6746607 + AluSq SINE Alu 1 288 -25 1143 246 102 47 chr20 59921398 59921497 -6746508 - L1ME3A LINE L1 -490 5680 5469 2263 65 16 59 chr20 59921643 59921949 -6746056 - AluY SINE Alu -18 293 1 2510 68 3 10 chr20 59922382 59922692 -6745313 + AluSq SINE Alu 1 308 -5 2524 69 0 3 chr20 59923926 59924232 -6743773 - AluY SINE Alu -6 305 1 2233 118 7 0 chr20 59925664 59925970 -6742035 + AluSx SINE Alu 1 308 -4 262 289 18 26 chr20 59926248 59926362 -6741643 - MIR SINE MIR -41 221 109 467 97 72 236 chr20 59926363 59926558 -6741447 + MER90 LTR ERV1 2 164 -411 412 246 129 31 chr20 59926578 59926802 -6741203 + MER90 LTR ERV1 369 614 0 183 262 0 95 chr20 59926805 59926889 -6741116 - MIR SINE MIR -166 96 21 642 196 6 27 chr20 59927187 59927423 -6740582 + CT-rich Low_complexity Low_complexity 1 243 -218 180 0 0 0 chr20 59927423 59927443 -6740562 + (TA)n Simple_repeat Simple_repeat 2 21 0 642 196 6 27 chr20 59927443 59927658 -6740347 + CT-rich Low_complexity Low_complexity 243 461 0 215 200 0 0 chr20 59927663 59927703 -6740302 + C-rich Low_complexity Low_complexity 4 43 0 293 143 0 0 chr20 59928614 59928663 -6739342 - L2 LINE L2 -1 3271 3223 2000 123 0 7 chr20 59929006 59929317 -6738688 - AluJo SINE Alu 0 319 11 300 91 0 0 chr20 59929400 59929444 -6738561 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 205 287 111 19 chr20 59929454 59929562 -6738443 - L2 LINE L2 -18 3254 3137 506 210 80 25 chr20 59929689 59929851 -6738154 + MIR SINE MIR 86 256 -6 856 209 37 11 chr20 59929894 59930081 -6737924 + AluJo SINE Alu 118 309 -3 1528 163 8 4 chr20 59930095 59930352 -6737653 + MLT1D LTR MaLR 248 505 0 206 122 0 20 chr20 59930753 59930802 -6737203 + (TAAA)n Simple_repeat Simple_repeat 2 49 0 3097 160 133 121 chr20 59931127 59931683 -6736322 - L1MC3 LINE L1 -17 7768 7220 347 256 11 0 chr20 59931683 59931773 -6736232 - MLT1F1 LTR MaLR -442 125 35 3097 160 133 121 chr20 59931773 59931897 -6736108 - L1MC3 LINE L1 -565 7220 7099 896 159 0 0 chr20 59931897 59932029 -6735976 - FLAM_C SINE Alu -1 132 1 3097 160 133 121 chr20 59932029 59932308 -6735697 - L1MC3 LINE L1 -686 7099 6706 312 291 152 83 chr20 59932345 59932949 -6735056 + L1MEd LINE L1 3 648 -5471 621 292 41 65 chr20 59932949 59933389 -6734616 + MLT1G1 LTR MaLR 1 391 -199 1095 233 97 126 chr20 59933418 59933780 -6734225 + MER77 LTR ERV1 58 400 -205 2526 111 19 6 chr20 59933780 59934139 -6733866 - THE1B LTR MaLR 0 364 1 1095 233 97 126 chr20 59934139 59934333 -6733672 + MER77 LTR ERV1 400 598 -7 372 189 77 63 chr20 59934417 59934560 -6733445 + MLT1G1 LTR MaLR 395 539 -28 262 232 256 12 chr20 59934569 59934733 -6733272 + L1MEd LINE L1 647 850 -5269 1069 234 170 8 chr20 59934746 59935339 -6732666 + LTR50 LTR ERVL 7 793 -2 297 203 17 0 chr20 59935345 59935404 -6732601 + HERV16 LTR ERVL 2 61 -4935 586 235 92 0 chr20 59935459 59935578 -6732427 - MER63A DNA MER1_type -4 206 77 1038 175 6 6 chr20 59935581 59935758 -6732247 + FRAM SINE Alu 1 168 -8 2247 114 0 3 chr20 59936147 59936446 -6731559 - AluSq SINE Alu -15 298 1 834 232 55 48 chr20 59936625 59936728 -6731277 + ERVL LTR ERVL 3906 4007 -1757 2381 81 0 7 chr20 59936728 59937025 -6730980 + AluSg SINE Alu 1 295 -15 834 232 55 48 chr20 59937025 59937296 -6730709 + ERVL LTR ERVL 4007 4315 -1449 1848 175 0 7 chr20 59937341 59937650 -6730355 + AluJb SINE Alu 1 307 -5 423 216 113 16 chr20 59937676 59937861 -6730144 + L1MEd LINE L1 895 1097 -5022 544 243 147 50 chr20 59937878 59938096 -6729909 + MER112 DNA MER1_type 15 253 -7 1746 158 19 48 chr20 59938159 59938470 -6729535 - AluJb SINE Alu -6 306 5 1737 191 26 3 chr20 59938492 59938842 -6729163 + L1MB3 LINE L1 5824 6181 -2 306 286 135 57 chr20 59938861 59938967 -6729038 + L1MEd LINE L1 1172 1268 -5042 2303 103 3 0 chr20 59938967 59939267 -6728738 + AluSx SINE Alu 1 301 -11 306 286 135 57 chr20 59939267 59939470 -6728535 + L1MEd LINE L1 1268 1454 -4856 1826 169 23 0 chr20 59939470 59939772 -6728233 + AluJb SINE Alu 1 309 -3 306 286 135 57 chr20 59939772 59940388 -6727617 + L1MEd LINE L1 1454 2214 -4096 306 242 43 8 chr20 59940390 59940510 -6727495 - L1MD3 LINE L1 0 8042 7914 26 0 0 0 chr20 59940933 59940959 -6727046 + AT_rich Low_complexity Low_complexity 1 26 0 297 118 0 0 chr20 59941363 59941414 -6726591 + (CGTG)n Simple_repeat Simple_repeat 4 54 0 22 35 0 0 chr20 59941810 59941839 -6726166 + GC_rich Low_complexity Low_complexity 1 29 0 262 288 254 3 chr20 59942012 59942300 -6725705 + L2 LINE L2 2945 3304 -9 343 286 88 14 chr20 59942639 59942786 -6725219 - L2 LINE L2 -38 3275 3118 198 258 197 0 chr20 59942834 59942900 -6725105 + L2 LINE L2 3194 3272 0 315 241 181 0 chr20 59942947 59943030 -6724975 - MIR SINE MIR -159 103 6 231 211 0 39 chr20 59943359 59943411 -6724594 - L2 LINE L2 0 3272 3223 367 261 26 26 chr20 59943563 59943678 -6724327 - L2 LINE L2 -231 3041 2927 2074 92 18 18 chr20 59943717 59943999 -6724006 - AluSx SINE Alu -17 295 14 1871 149 21 3 chr20 59945221 59945510 -6722495 - AluJo SINE Alu -18 294 1 2250 82 4 0 chr20 59945892 59946211 -6721794 - AluSp SINE Alu 0 320 1 2483 71 3 0 chr20 59947332 59947628 -6720377 - AluSc SINE Alu -12 297 1 2475 76 3 0 chr20 59949417 59949719 -6718286 + AluSp SINE Alu 1 303 -10 1365 202 112 6 chr20 59950170 59950501 -6717504 - MER47A DNA MER2_type 0 366 1 186 281 35 0 chr20 59950629 59950686 -6717319 - L2 LINE L2 -9 3263 3205 215 256 128 23 chr20 59950865 59950951 -6717054 - MIR SINE MIR -24 238 144 2318 109 3 0 chr20 59951198 59951510 -6716495 + AluSq SINE Alu 1 313 0 1883 125 27 10 chr20 59951617 59951912 -6716093 + AluSx SINE Alu 2 301 -11 230 263 25 25 chr20 59952381 59952461 -6715544 + MIR3 SINE MIR 108 187 -21 26 0 0 0 chr20 59953315 59953341 -6714664 + AT_rich Low_complexity Low_complexity 1 26 0 214 363 82 11 chr20 59954148 59954330 -6713675 + L2 LINE L2 2593 2787 -527 189 157 100 71 chr20 59954762 59954832 -6713173 + L2 LINE L2 3177 3248 -24 1854 182 0 0 chr20 59954903 59955199 -6712806 + AluSx SINE Alu 2 297 -15 278 331 127 57 chr20 59955772 59956511 -6711494 + L2 LINE L2 2091 2881 -433 315 275 244 8 chr20 59956725 59956872 -6711133 + MIR SINE MIR 33 219 -43 221 281 24 0 chr20 59956924 59956989 -6711016 - MER5A DNA MER1_type -48 130 67 662 252 119 51 chr20 59957083 59957632 -6710373 - L2 LINE L2 -18 3295 2727 1900 109 88 0 chr20 59957632 59957915 -6710090 - AluSg SINE Alu -2 308 1 1477 101 5 19 chr20 59957922 59958130 -6709875 - AluSg/x SINE Alu -4 306 102 628 215 105 38 chr20 59958188 59958397 -6709608 - L2 LINE L2 -864 2450 2228 229 253 143 11 chr20 59960993 59961084 -6706921 - L2 LINE L2 -4 3268 3166 475 274 18 24 chr20 59961282 59961446 -6706559 - L2 LINE L2 0 3313 3151 22 0 0 0 chr20 59961523 59961545 -6706460 + AT_rich Low_complexity Low_complexity 1 22 0 282 56 0 0 chr20 59962079 59962115 -6705890 + (CA)n Simple_repeat Simple_repeat 1 36 0 5340 179 68 34 chr20 59962226 59962587 -6705418 - L1MC1 LINE L1 0 6333 5986 225 0 0 0 chr20 59962587 59962612 -6705393 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1805 140 3 28 chr20 59962617 59962903 -6705102 - AluSx SINE Alu -33 279 1 5340 179 68 34 chr20 59962903 59963459 -6704546 - L1MC1 LINE L1 -350 5983 5447 2133 110 34 0 chr20 59963459 59963751 -6704254 - AluSx SINE Alu -10 302 1 5340 179 68 34 chr20 59963751 59963838 -6704167 - L1MC1 LINE L1 -886 5447 5364 195 62 31 0 chr20 59963838 59963870 -6704135 + (TTTTA)n Simple_repeat Simple_repeat 2 170 0 2230 76 0 17 chr20 59963870 59964158 -6703847 - AluY SINE Alu -1 314 1 5340 179 68 34 chr20 59964158 59964413 -6703592 - L1MC1 LINE L1 -968 5365 5024 1994 137 10 0 chr20 59964477 59964770 -6703235 + AluSx SINE Alu 1 296 -16 6669 62 9 40 chr20 59965321 59966309 -6701696 - SVA Other Other 0 1386 430 4122 85 32 72 chr20 59966322 59967286 -6700719 - SVA Other Other -518 868 154 236 286 124 29 chr20 59969046 59969151 -6698854 - L2 LINE L2 -16 3297 3183 352 300 130 20 chr20 59969781 59969981 -6698024 - L3 LINE CR1 -564 1013 792 502 301 127 21 chr20 59969992 59970228 -6697777 + MIR SINE MIR 2 262 0 266 0 0 29 chr20 59970653 59970688 -6697317 + (CACCC)n Simple_repeat Simple_repeat 5 38 0 406 318 184 5 chr20 59971633 59971834 -6696171 - MIR SINE MIR -6 256 20 2290 66 10 0 chr20 59972175 59972463 -6695542 - AluSx SINE Alu -20 292 2 245 333 74 7 chr20 59972595 59972730 -6695275 - MIR SINE MIR -117 145 2 286 356 35 17 chr20 59973301 59973416 -6694589 + MIR SINE MIR 56 172 -90 206 231 15 0 chr20 59973862 59973927 -6694078 + GA-rich Low_complexity Low_complexity 2 67 0 2346 80 3 3 chr20 59975309 59975622 -6692383 + AluSp SINE Alu 1 313 0 776 265 6 11 chr20 59977854 59978035 -6689970 + MER5A DNA MER1_type 5 184 -5 27 0 0 0 chr20 59978052 59978079 -6689926 + AT_rich Low_complexity Low_complexity 1 27 0 1905 132 7 10 chr20 59978079 59978375 -6689630 - AluSx SINE Alu -17 295 1 811 177 7 0 chr20 59978402 59978543 -6689462 - FRAM SINE Alu -36 140 1 348 120 0 0 chr20 59980626 59980676 -6687329 - Charlie1 DNA MER1_type -1 2760 2711 847 152 0 0 chr20 59980685 59980810 -6687195 + FLAM_A SINE Alu 1 125 -8 3207 174 90 32 chr20 59982048 59982107 -6685898 - Charlie1 DNA MER1_type -1 2760 2706 812 163 8 0 chr20 59982107 59982236 -6685769 + FLAM_A SINE Alu 1 130 -3 3207 174 90 32 chr20 59982236 59982406 -6685599 - Charlie1 DNA MER1_type -55 2706 2547 1540 129 24 87 chr20 59982406 59982739 -6685266 - AluSx SINE Alu 0 312 1 3207 174 90 32 chr20 59982739 59982750 -6685255 - Charlie1 DNA MER1_type -214 2547 2538 2250 92 0 3 chr20 59982750 59983055 -6684950 - AluSx SINE Alu -8 304 1 3207 174 90 32 chr20 59983055 59983634 -6684371 - Charlie1 DNA MER1_type -223 2538 1891 1536 151 60 20 chr20 59983738 59984037 -6683968 - AluJo SINE Alu 0 312 2 329 336 19 0 chr20 59985409 59985516 -6682489 + MIR SINE MIR 32 140 -68 455 282 68 58 chr20 59985740 59985946 -6682059 + MIR SINE MIR 43 250 -12 245 165 127 127 chr20 59986514 59986593 -6681412 + MIR SINE MIR 16 94 -114 262 275 170 40 chr20 59988086 59988286 -6679719 + MIR SINE MIR 4 229 -33 23 0 0 0 chr20 59988366 59988389 -6679616 + AT_rich Low_complexity Low_complexity 1 23 0 1869 141 27 0 chr20 59988507 59988805 -6679200 - AluJb SINE Alu -6 306 1 488 220 138 54 chr20 59988812 59989177 -6678828 - L1MC4 LINE L1 0 8042 7709 1504 149 131 4 chr20 59989177 59989445 -6678560 - AluJb SINE Alu 0 302 1 488 220 138 54 chr20 59989445 59989812 -6678193 - L1MC4 LINE L1 -333 7709 7200 381 279 63 6 chr20 59989891 59990049 -6677956 - L1ME4a LINE L1 -237 5884 5718 1615 173 3 7 chr20 59990463 59990758 -6677247 - AluJo SINE Alu -18 294 1 1028 181 48 43 chr20 59991665 59991875 -6676130 - MER20 DNA MER1_type -1 218 8 270 351 67 0 chr20 59992301 59992435 -6675570 + MIR3 SINE MIR 18 160 -48 2146 93 0 7 chr20 59993539 59993840 -6674165 + AluSg SINE Alu 1 299 -11 190 227 68 0 chr20 59994300 59994344 -6673661 + L3 LINE CR1 1521 1567 -10 337 245 189 42 chr20 59994805 59994948 -6673057 - L2 LINE L2 -2 3270 3107 189 0 0 0 chr20 59995578 59995599 -6672406 + (T)n Simple_repeat Simple_repeat 1 21 0 958 123 0 14 chr20 59995619 59995765 -6672240 - AluSq/x SINE Alu -166 146 3 236 308 39 0 chr20 59996077 59996155 -6671850 + MIR3 SINE MIR 86 166 -42 200 176 0 0 chr20 59996553 59996587 -6671418 + (CA)n Simple_repeat Simple_repeat 1 34 0 22 35 0 0 chr20 59997769 59997798 -6670207 + AT_rich Low_complexity Low_complexity 1 29 0 333 0 0 0 chr20 59997864 59997901 -6670104 + (TG)n Simple_repeat Simple_repeat 2 38 0 298 200 40 67 chr20 59998626 59998701 -6669304 - MER58A DNA MER1_type -16 91 19 198 167 0 0 chr20 59999830 59999866 -6668139 + (TG)n Simple_repeat Simple_repeat 1 36 0 188 373 13 0 chr20 60002497 60002572 -6665433 - L2 LINE L2 0 3272 3197 370 277 0 20 chr20 60003406 60003507 -6664498 - MIR3 SINE MIR -6 202 104 1756 164 0 3 chr20 60003890 60004188 -6663817 - AluJo SINE Alu -15 297 1 815 328 129 2 chr20 60004217 60004705 -6663300 - L1MC4a LINE L1 -1897 5911 5362 3055 249 56 22 chr20 60005947 60006946 -6661059 - HAL1 LINE L1 0 2507 1475 319 225 122 14 chr20 60006941 60007163 -6660842 - HAL1 LINE L1 -1349 1158 913 * 1256 183 0 9 chr20 60007164 60007377 -6660628 - MER46A DNA MER2_type -25 211 1 638 283 53 73 chr20 60007466 60007865 -6660140 - HAL1 LINE L1 -2115 392 2 267 265 0 0 chr20 60007886 60007935 -6660070 + L2 LINE L2 3211 3259 -13 1971 126 7 0 chr20 60008121 60008415 -6659590 - AluY SINE Alu -12 299 4 228 35 0 0 chr20 60008415 60008444 -6659561 + (T)n Simple_repeat Simple_repeat 1 29 0 197 324 73 0 chr20 60008513 60008581 -6659424 - MIR3 SINE MIR -18 190 118 617 226 35 60 chr20 60008946 60009145 -6658860 - L2 LINE L2 0 3313 3120 604 273 166 40 chr20 60010624 60011149 -6656856 - L2 LINE L2 -3 3310 2717 217 286 26 0 chr20 60012648 60012725 -6655280 + MER5C DNA MER1_type 40 118 -206 285 260 212 74 chr20 60013844 60014278 -6653727 + L2 LINE L2 2820 3272 0 229 284 94 8 chr20 60014458 60014585 -6653420 - MIR SINE MIR -65 143 6 328 287 61 67 chr20 60014692 60014741 -6653264 + L1ME LINE L1 5566 5614 -507 2257 124 0 0 chr20 60014741 60015039 -6652966 + AluSx SINE Alu 1 298 -14 2127 150 0 0 chr20 60015041 60015347 -6652658 + AluSg SINE Alu 1 306 -4 328 287 61 67 chr20 60015347 60015458 -6652547 + L1ME LINE L1 5615 5728 -393 218 98 73 0 chr20 60017728 60017769 -6650236 + (TCCA)n Simple_repeat Simple_repeat 3 46 0 444 231 8 54 chr20 60017841 60017971 -6650034 + Charlie4 DNA MER1_type 72 195 -1766 595 205 30 30 chr20 60018040 60018206 -6649799 + Charlie4 DNA MER1_type 1784 1949 -12 221 235 24 47 chr20 60018448 60018533 -6649472 + MER5A DNA MER1_type 12 94 -95 1016 221 0 0 chr20 60020320 60020519 -6647486 - MER58A DNA MER1_type 0 224 26 2112 139 0 0 chr20 60020746 60021034 -6646971 - AluSx SINE Alu -11 301 14 711 255 126 0 chr20 60021092 60021363 -6646642 - MER113 DNA MER1_type? -89 432 128 566 240 116 28 chr20 60022254 60022504 -6645501 + L2 LINE L2 2910 3181 -132 363 347 40 29 chr20 60024461 60024634 -6643371 - MIR SINE MIR -58 204 30 356 295 9 0 chr20 60026405 60026517 -6641488 - MIR SINE MIR -65 197 85 1221 208 13 19 chr20 60026566 60026601 -6641404 - L1MB5 LINE L1 -12 6159 6125 2203 102 0 3 chr20 60026601 60026912 -6641093 + AluSx SINE Alu 1 310 0 1221 208 13 19 chr20 60026912 60027192 -6640813 - L1MB5 LINE L1 -46 6125 5868 36 62 0 0 chr20 60027652 60027716 -6640289 + AT_rich Low_complexity Low_complexity 1 64 0 1290 170 139 86 chr20 60027848 60028278 -6639727 - MLT1C LTR MaLR -14 453 1 2390 95 0 3 chr20 60028363 60028668 -6639337 - AluSc SINE Alu -5 304 1 290 296 19 46 chr20 60028669 60028777 -6639228 - L2 LINE L2 -14 3299 3195 4920 202 22 30 chr20 60029225 60029967 -6638038 - L1MC4a LINE L1 0 7808 7077 931 137 0 0 chr20 60029967 60030098 -6637907 - FLAM_C SINE Alu -1 132 2 4920 202 22 30 chr20 60030098 60030526 -6637479 - L1MC4a LINE L1 -731 7077 6647 366 149 11 32 chr20 60030541 60030635 -6637370 + CT-rich Low_complexity Low_complexity 4 95 0 424 254 64 0 chr20 60030645 60030755 -6637250 + L2 LINE L2 3186 3302 -11 301 236 14 0 chr20 60030753 60030825 -6637180 + MIR SINE MIR 189 261 -1 * 1048 207 44 44 chr20 60031284 60031555 -6636450 - MER33 DNA MER1_type -22 302 32 22 35 0 0 chr20 60031773 60031802 -6636203 + AT_rich Low_complexity Low_complexity 1 29 0 289 341 29 46 chr20 60034845 60035018 -6632987 - MIR SINE MIR -46 216 47 201 182 0 0 chr20 60035078 60035111 -6632894 - MIR SINE MIR -9 253 221 412 178 44 0 chr20 60036182 60036272 -6631733 - MER53 DNA DNA 0 189 96 338 245 106 0 chr20 60036547 60036641 -6631364 + L2 LINE L2 3210 3313 0 517 292 131 19 chr20 60037171 60037323 -6630682 - L1ME4a LINE L1 -223 5898 5765 225 0 0 0 chr20 60037323 60037348 -6630657 + (CA)n Simple_repeat Simple_repeat 2 26 0 517 292 131 19 chr20 60037348 60037568 -6630437 - L1ME4a LINE L1 -356 5765 5484 492 317 38 11 chr20 60037725 60037908 -6630097 + L2 LINE L2 2542 2729 -585 1162 266 63 59 chr20 60038117 60038810 -6629195 + L1ME3A LINE L1 647 1342 -4863 301 261 17 17 chr20 60038846 60038965 -6629040 + L1ME3A LINE L1 1567 1685 -4711 1912 76 0 0 chr20 60039034 60039257 -6628748 - AluSg/x SINE Alu -5 307 85 22 0 0 0 chr20 60039581 60039603 -6628402 + AT_rich Low_complexity Low_complexity 1 22 0 540 299 75 0 chr20 60039675 60039943 -6628062 + L1ME3A LINE L1 2217 2504 -3711 276 316 19 13 chr20 60039950 60040105 -6627900 + L1ME3A LINE L1 2542 2697 -3518 266 233 17 0 chr20 60040122 60040182 -6627823 + (TG)n Simple_repeat Simple_repeat 2 62 0 1336 206 31 19 chr20 60040196 60040538 -6627467 + Tigger7 DNA MER2_type 1 2491 0 1036 283 56 18 chr20 60040561 60041165 -6626840 + L1ME3A LINE L1 2714 3340 -2875 223 24 24 49 chr20 60041385 60041426 -6626579 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 903 147 0 14 chr20 60041434 60041577 -6626428 + FLAM_C SINE Alu 1 141 -2 2383 97 6 6 chr20 60041581 60041892 -6626113 + AluSq SINE Alu 1 311 -2 258 269 30 0 chr20 60041894 60041961 -6626044 + L1ME3A LINE L1 3643 3711 -2504 1708 198 63 14 chr20 60041975 60042464 -6625541 - MER69 DNA AcHobo -4 2522 2010 1127 258 90 61 chr20 60042466 60042977 -6625028 - MER69 DNA AcHobo -1962 564 39 1663 289 92 35 chr20 60043100 60044451 -6623554 + L1ME3A LINE L1 3846 5273 -942 328 319 72 19 chr20 60044483 60044790 -6623215 + L1ME3A LINE L1 5328 5650 -581 231 290 43 0 chr20 60044827 60044896 -6623109 + MER112 DNA MER1_type 1 72 -188 238 265 17 0 chr20 60044939 60045056 -6622949 + (CA)n Simple_repeat Simple_repeat 2 120 0 393 269 17 13 chr20 60045068 60045373 -6622632 + (CA)n Simple_repeat Simple_repeat 1 306 0 408 268 64 13 chr20 60045375 60045532 -6622473 + MER112 DNA MER1_type 70 234 -26 594 312 25 21 chr20 60045552 60045837 -6622168 + L1ME3A LINE L1 5735 6020 -219 2444 159 23 34 chr20 60045998 60046437 -6621568 - Tigger2a DNA MER2_type 0 434 1 1822 151 22 26 chr20 60046440 60046818 -6621187 - AluJo SINE Alu 0 377 1 333 314 119 13 chr20 60046933 60047159 -6620846 + L2 LINE L2 2819 3068 -245 894 215 6 11 chr20 60047390 60047567 -6620438 - MER45A DNA AcHobo -1 177 2 236 283 179 9 chr20 60047737 60047843 -6620162 + MIR SINE MIR 13 136 -126 1487 170 3 103 chr20 60049569 60049957 -6618048 - MLT1B LTR MaLR -34 356 8 266 200 130 43 chr20 60051290 60051405 -6616600 - MLT1J LTR MaLR -151 360 236 306 175 75 50 chr20 60051433 60051513 -6616492 - MLT1J LTR MaLR -369 142 61 196 245 0 38 chr20 60052098 60052151 -6615854 - L2 LINE L2 0 3313 3263 316 207 37 12 chr20 60052637 60052719 -6615286 + L2 LINE L2 3184 3267 -5 1897 164 5 55 chr20 60053409 60053812 -6614193 + MLT1B LTR MaLR 8 390 0 641 309 46 54 chr20 60054096 60054268 -6613737 + L2 LINE L2 2967 3139 -174 2066 118 7 0 chr20 60054268 60054580 -6613425 - AluSx SINE Alu 0 314 1 641 309 46 54 chr20 60054580 60054756 -6613249 + L2 LINE L2 3139 3313 0 239 193 18 18 chr20 60055956 60056013 -6611992 - LTR67 LTR ERVL -17 540 484 297 305 125 8 chr20 60056653 60056781 -6611224 + MIR SINE MIR 117 259 -3 229 202 164 19 chr20 60057223 60057327 -6610678 - L1ME4a LINE L1 -46 6075 5957 877 160 0 0 chr20 60057413 60057544 -6610461 - AluJb SINE Alu -181 131 1 244 279 123 0 chr20 60057561 60057683 -6610322 - L1ME4a LINE L1 -247 5874 5738 1757 217 95 21 chr20 60057852 60058285 -6609720 + MLT1C LTR MaLR 3 467 0 361 328 177 10 chr20 60058616 60058808 -6609197 - MIR SINE MIR -11 251 28 2432 121 8 30 chr20 60059176 60059548 -6608457 + THE1B LTR MaLR 1 364 0 182 139 47 0 chr20 60059642 60059685 -6608320 + CT-rich Low_complexity Low_complexity 4 48 0 195 173 0 0 chr20 60059687 60059739 -6608266 + (CA)n Simple_repeat Simple_repeat 1 52 0 356 316 106 23 chr20 60059950 60060309 -6607696 + L1MC/D LINE L1 5268 5652 -533 189 245 41 0 chr20 60060326 60060375 -6607630 - L2 LINE L2 -285 2987 2937 570 277 15 50 chr20 60060877 60061079 -6606926 - L2 LINE L2 -21 3292 3098 498 203 0 0 chr20 60061080 60061198 -6606807 + (TG)n Simple_repeat Simple_repeat 1 118 0 480 226 147 17 chr20 60061233 60061410 -6606595 - L2 LINE L2 -259 3054 2855 444 229 85 17 chr20 60061587 60061705 -6606300 + MIR SINE MIR 56 181 -81 184 197 115 16 chr20 60061692 60061753 -6606252 - L2 LINE L2 -1307 2007 1941 * 306 239 0 15 chr20 60061951 60062018 -6605987 - L3 LINE CR1 -103 1474 1409 * 443 317 126 43 chr20 60062008 60062489 -6605516 + L2 LINE L2 2718 3264 -8 2137 107 31 0 chr20 60062521 60062811 -6605194 - AluSx SINE Alu -13 299 1 223 194 0 0 chr20 60062855 60062891 -6605114 - MIR SINE MIR -107 155 120 274 363 34 39 chr20 60063212 60063416 -6604589 - MIR SINE MIR -36 226 24 1096 188 23 23 chr20 60064523 60064741 -6603264 + MER20 DNA MER1_type 1 218 -1 342 346 11 39 chr20 60065900 60066079 -6601926 - MIR SINE MIR -76 186 13 285 234 32 20 chr20 60067995 60068198 -6599807 + GA-rich Low_complexity Low_complexity 1 205 0 259 130 65 0 chr20 60068247 60068324 -6599681 + GA-rich Low_complexity Low_complexity 1 82 0 2314 106 0 0 chr20 60068952 60069253 -6598752 + AluSq SINE Alu 1 301 -12 401 283 77 38 chr20 60069529 60069756 -6598249 - MIR SINE MIR -8 254 19 1498 139 0 0 chr20 60069902 60070111 -6597894 + AluJb SINE Alu 85 293 -19 286 327 0 19 chr20 60070227 60070331 -6597674 - MIR3 SINE MIR -25 183 82 193 160 10 0 chr20 60071269 60071312 -6596693 - MIR SINE MIR -61 147 103 275 242 15 0 chr20 60071339 60071405 -6596600 + L2 LINE L2 3206 3272 0 272 257 158 7 chr20 60071493 60071645 -6596360 + MER96 DNA MER1_type? 1 175 0 180 259 52 0 chr20 60071649 60071707 -6596298 + MIR SINE MIR 110 170 -92 189 304 58 0 chr20 60071790 60071859 -6596146 - MIR SINE MIR -170 92 20 208 283 50 0 chr20 60072042 60072102 -6595903 + L2 LINE L2 3210 3272 0 648 237 0 0 chr20 60072108 60072281 -6595724 + (TGGG)n Simple_repeat Simple_repeat 2 174 0 803 193 9 0 chr20 60072288 60072522 -6595483 + (TGGA)n Simple_repeat Simple_repeat 1 236 0 256 325 125 19 chr20 60073133 60073293 -6594712 + MIR SINE MIR 50 226 -36 320 298 46 0 chr20 60074454 60074585 -6593420 - L1ME4a LINE L1 -1 6120 5984 195 42 0 0 chr20 60074796 60074820 -6593185 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 190 289 60 12 chr20 60077096 60077179 -6590826 + MIR SINE MIR 170 256 -6 707 255 16 40 chr20 60077984 60078235 -6589770 - MER113 DNA MER1_type? -119 402 158 3674 209 45 34 chr20 60078246 60079209 -6588796 - L1ME1 LINE L1 -2 6444 5493 2919 80 0 11 chr20 60079209 60079585 -6588420 - THE1C LTR MaLR -3 372 1 3674 209 45 34 chr20 60079585 60080053 -6587952 - L1ME1 LINE L1 -953 5493 5032 1729 169 3 24 chr20 60080053 60080348 -6587657 + AluJo SINE Alu 1 289 -23 897 116 0 0 chr20 60080353 60080499 -6587506 + (TA)n Simple_repeat Simple_repeat 1 146 0 3674 209 45 34 chr20 60080499 60080602 -6587403 - L1ME1 LINE L1 -1417 5029 4895 809 203 0 0 chr20 60080619 60080757 -6587248 - AluJb SINE Alu -38 274 137 1201 235 67 5 chr20 60080760 60081147 -6586858 - L1ME1 LINE L1 -1534 4892 4482 612 262 16 16 chr20 60081147 60081391 -6586614 - L1ME1 LINE L1 -5263 1163 920 2148 233 101 43 chr20 60081397 60082174 -6585831 - L1MEc LINE L1 -1949 4992 4139 2215 90 22 0 chr20 60082174 60082451 -6585554 + AluSx SINE Alu 11 293 -19 2148 233 101 43 chr20 60082451 60082701 -6585304 - L1MEc LINE L1 -2802 4139 3905 379 271 40 51 chr20 60082694 60082967 -6585038 - L1MEc LINE L1 -4258 2864 2595 * 893 189 111 26 chr20 60083005 60083195 -6584810 - MER58A DNA MER1_type -1 223 18 703 234 101 3 chr20 60083195 60083502 -6584503 - L1MEc LINE L1 -4792 2149 1813 414 233 250 0 chr20 60083513 60083629 -6584376 - L1MCc LINE L1 -3366 3575 3431 1906 259 54 19 chr20 60083630 60084552 -6583453 - L1MCc LINE L1 -4892 1531 868 739 285 79 29 chr20 60084797 60085214 -6582791 - L1MCc LINE L1 -5956 467 30 300 239 200 48 chr20 60085337 60085512 -6582493 + MIR SINE MIR 51 249 -13 280 319 14 50 chr20 60085934 60086075 -6581930 + MIR SINE MIR 81 216 -46 530 322 82 13 chr20 60086766 60086897 -6581108 + MIR SINE MIR 14 135 -127 1440 211 46 46 chr20 60086897 60087291 -6580714 - MLT2C1 LTR ERVL -3 394 1 530 322 82 13 chr20 60087291 60087392 -6580613 + MIR SINE MIR 135 262 0 188 309 0 0 chr20 60087428 60087470 -6580535 + MIR SINE MIR 221 262 0 222 239 0 0 chr20 60087567 60087659 -6580346 + (CA)n Simple_repeat Simple_repeat 1 92 0 2260 100 28 0 chr20 60087927 60088217 -6579788 - AluSx SINE Alu -14 298 1 424 291 35 0 chr20 60088610 60088751 -6579254 + L2 LINE L2 2556 2701 -613 1590 174 10 29 chr20 60088807 60088969 -6579036 + L1PB4 LINE L1 5846 6001 -155 2561 108 14 3 chr20 60088969 60089329 -6578676 - THE1B LTR MaLR 0 364 1 1590 174 10 29 chr20 60089329 60089476 -6578529 + L1PB4 LINE L1 6001 6149 -7 1824 239 80 40 chr20 60089501 60090318 -6577687 - L1ME3A LINE L1 -86 6084 5236 274 196 115 38 chr20 60090532 60090688 -6577317 + MIR SINE MIR 2 237 -25 263 290 0 14 chr20 60090782 60090851 -6577154 + L2 LINE L2 2981 3048 -224 778 288 66 36 chr20 60090851 60091243 -6576762 - MLT1I LTR MaLR 0 409 6 224 313 60 37 chr20 60091297 60091431 -6576574 + L2 LINE L2 3113 3249 -64 274 125 54 0 chr20 60091568 60091624 -6576381 - L1MC5 LINE L1 -94 7867 7809 1013 244 159 35 chr20 60091646 60092224 -6575781 - L1MC5 LINE L1 -50 7911 7262 2050 106 33 0 chr20 60092618 60092921 -6575084 - L1PA10 LINE L1 -2 6166 5854 206 234 0 0 chr20 60093228 60093275 -6574730 + CT-rich Low_complexity Low_complexity 1 47 0 254 248 77 43 chr20 60093404 60093521 -6574484 + MIR SINE MIR 50 170 -92 594 208 20 47 chr20 60094652 60094801 -6573204 - MER20 DNA MER1_type -57 162 18 1891 151 0 43 chr20 60097045 60097369 -6570636 - AluJb SINE Alu -2 310 1 721 213 136 49 chr20 60097462 60097748 -6570257 + MER33 DNA MER1_type 1 311 -13 1926 98 62 0 chr20 60097783 60098057 -6569948 + AluSx SINE Alu 22 312 0 21 0 0 0 chr20 60098386 60098407 -6569598 + AT_rich Low_complexity Low_complexity 1 21 0 293 317 32 59 chr20 60099111 60099297 -6568708 + MIR SINE MIR 2 182 -80 285 329 39 26 chr20 60099366 60099521 -6568484 + L2 LINE L2 3149 3305 -8 255 61 0 0 chr20 60099646 60099679 -6568326 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 201 323 43 21 chr20 60101655 60101748 -6566257 + L2 LINE L2 3216 3310 -3 408 89 5 5 chr20 60101842 60101911 -6566094 - L1MB1 LINE L1 -1 6167 6110 276 365 83 17 chr20 60102032 60102262 -6565743 - MIR SINE MIR -17 245 1 2241 115 3 0 chr20 60103300 60103648 -6564357 - AluSx SINE Alu 0 312 1 1598 226 8 11 chr20 60103656 60104023 -6563982 - L1MB8 LINE L1 0 6178 5813 326 245 69 35 chr20 60104354 60104496 -6563509 - MIR SINE MIR -13 249 99 328 353 85 13 chr20 60105309 60105462 -6562543 - MIR SINE MIR -75 187 24 508 347 22 9 chr20 60105595 60105817 -6562188 - L2 LINE L2 -174 3098 2874 276 292 124 44 chr20 60106688 60106825 -6561180 - L2 LINE L2 -2 3311 3164 297 318 27 0 chr20 60107728 60107838 -6560167 + MER103 DNA DNA 44 156 -10 207 319 0 0 chr20 60107980 60108049 -6559956 + (TTCA)n Simple_repeat Simple_repeat 2 70 0 438 53 0 0 chr20 60108051 60108108 -6559897 + (TCCA)n Simple_repeat Simple_repeat 3 59 0 880 261 128 48 chr20 60108971 60109868 -6558137 - L2 LINE L2 -95 3218 2254 494 240 26 105 chr20 60109876 60110105 -6557900 + MLT1K LTR MaLR 378 588 0 212 304 35 43 chr20 60110207 60110322 -6557683 + MIR SINE MIR 17 130 -78 195 262 303 0 chr20 60111872 60111994 -6556011 - MIR SINE MIR -87 175 17 245 296 56 0 chr20 60112007 60112078 -6555927 - MER5A DNA MER1_type -5 184 110 365 276 105 50 chr20 60112464 60112703 -6555302 - L2 LINE L2 -465 2849 2598 299 331 0 25 chr20 60112723 60112883 -6555122 + L1ME1 LINE L1 545 700 -5696 434 274 73 6 chr20 60113023 60113202 -6554803 + L1MEc LINE L1 1720 1910 -4486 2900 245 137 13 chr20 60113206 60115007 -6552998 + L1ME1 LINE L1 788 2797 -3418 484 270 44 0 chr20 60115002 60115139 -6552866 + L1ME1 LINE L1 5516 5658 -577 * 1351 174 23 0 chr20 60115149 60115241 -6552764 - AluJb SINE Alu -88 224 136 225 0 0 0 chr20 60115241 60115266 -6552739 + (TG)n Simple_repeat Simple_repeat 2 26 0 1351 174 23 0 chr20 60115266 60115392 -6552613 - AluJb SINE Alu -176 136 1 1704 206 92 37 chr20 60115392 60115825 -6552180 + L1ME1 LINE L1 5647 6103 -132 1281 183 24 66 chr20 60115846 60116213 -6551792 + L1ME LINE L1 5179 5523 -643 2139 90 0 52 chr20 60116213 60116523 -6551482 - AluSx SINE Alu 0 312 19 1281 183 24 66 chr20 60116523 60116622 -6551383 + L1ME LINE L1 5523 5625 -541 2137 105 3 0 chr20 60116870 60117165 -6550840 - AluSx SINE Alu -11 301 6 2322 50 0 0 chr20 60117178 60117509 -6550496 - AluY SINE Alu 0 331 1 188 228 70 0 chr20 60117644 60117701 -6550304 + L2 LINE L2 3170 3230 -42 587 226 219 0 chr20 60118617 60118763 -6549242 - MER45A DNA AcHobo 0 178 1 392 218 196 15 chr20 60119523 60119656 -6548349 + MIR SINE MIR 31 187 -75 392 333 106 12 chr20 60119943 60120198 -6547807 + L2 LINE L2 3035 3313 0 189 121 0 0 chr20 60120213 60120246 -6547759 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 251 320 90 22 chr20 60120256 60120478 -6547527 - L2 LINE L2 -413 2901 2665 184 158 79 0 chr20 60120576 60120614 -6547391 + MIR SINE MIR 74 114 -94 2195 114 0 3 chr20 60124773 60125079 -6542926 - AluSx SINE Alu -7 305 1 910 239 0 0 chr20 60125595 60125775 -6542230 + MER58A DNA MER1_type 45 224 0 285 293 43 35 chr20 60126045 60126161 -6541844 - MIR SINE MIR -38 224 108 329 284 79 8 chr20 60126592 60126719 -6541286 + L2 LINE L2 2507 2642 -672 408 227 7 0 chr20 60126722 60126882 -6541123 + (TCCA)n Simple_repeat Simple_repeat 1 161 0 211 289 84 0 chr20 60126884 60126967 -6541038 - L2 LINE L2 -16 3297 3208 493 285 8 0 chr20 60127105 60127235 -6540770 + MER94 DNA DNA 1 131 -3 2213 100 0 3 chr20 60127348 60127648 -6540357 + AluSg SINE Alu 1 299 -11 387 224 84 9 chr20 60128030 60128137 -6539868 + L2 LINE L2 3136 3250 -22 183 366 75 0 chr20 60128585 60128678 -6539327 + MIR SINE MIR 50 149 -113 449 284 117 19 chr20 60129426 60129690 -6538315 - LTR33 LTR ERVL -52 469 180 271 164 0 197 chr20 60129855 60129977 -6538028 - MER102a DNA MER1_type -1 329 232 361 362 0 14 chr20 60130631 60130769 -6537236 - MIR SINE MIR -110 152 17 322 356 37 37 chr20 60130751 60131021 -6536984 + L2 LINE L2 2962 3231 -41 * 198 103 0 0 chr20 60131027 60131056 -6536949 + (TAA)n Simple_repeat Simple_repeat 1 29 0 334 337 203 0 chr20 60131075 60131238 -6536767 - MIR SINE MIR -19 243 48 677 303 21 0 chr20 60131320 60131508 -6536497 - MER58A DNA MER1_type -21 203 12 249 200 80 27 chr20 60131529 60131604 -6536401 - HsTC2 DNA Tc2 -1814 84 6 2173 107 0 0 chr20 60133190 60133489 -6534516 - AluSx SINE Alu -13 299 1 405 319 79 21 chr20 60133776 60133988 -6534017 + MIR SINE MIR 2 217 -41 323 77 0 19 chr20 60134172 60134224 -6533781 + (GA)n Simple_repeat Simple_repeat 1 51 0 1314 262 41 23 chr20 60134461 60134859 -6533146 - MLT1K LTR MaLR -4 584 106 2236 131 39 28 chr20 60134859 60135217 -6532788 + THE1B LTR MaLR 1 362 -2 1314 262 41 23 chr20 60135217 60135303 -6532702 - MLT1K LTR MaLR -482 106 23 26 30 0 0 chr20 60135783 60135816 -6532189 + AT_rich Low_complexity Low_complexity 1 33 0 621 230 36 30 chr20 60136496 60136661 -6531344 + MIR SINE MIR 80 245 -17 326 123 18 0 chr20 60136819 60136876 -6531129 + CT-rich Low_complexity Low_complexity 2 59 0 757 155 24 6 chr20 60136888 60137056 -6530949 + CT-rich Low_complexity Low_complexity 1 171 0 876 303 129 5 chr20 60137056 60137574 -6530431 - L2 LINE L2 -1 3312 2736 254 218 0 0 chr20 60138237 60138292 -6529713 + MER103 DNA DNA 30 84 -82 529 312 102 62 chr20 60138325 60138748 -6529257 + LTR16C LTR ERVL 43 482 -9 349 245 21 0 chr20 60138779 60138873 -6529132 + MER103 DNA DNA 26 121 -45 187 273 34 80 chr20 60139034 60139122 -6528883 - MIR SINE MIR -165 97 14 282 194 276 51 chr20 60140084 60140182 -6527823 + L2 LINE L2 3186 3305 -8 466 113 80 21 chr20 60140183 60140596 -6527409 + (TCTA)n Simple_repeat Simple_repeat 1 388 -399 2176 96 0 0 chr20 60140596 60140909 -6527096 + AluSx SINE Alu 1 313 0 466 113 80 21 chr20 60140909 60140926 -6527079 + (TCTA)n Simple_repeat Simple_repeat 388 787 0 761 323 26 19 chr20 60140927 60141305 -6526700 - L1ME4a LINE L1 -142 5979 5599 416 268 8 41 chr20 60141754 60141877 -6526128 + MIR SINE MIR 5 123 -139 291 387 29 7 chr20 60142064 60142201 -6525804 + L2 LINE L2 3133 3272 0 496 42 14 14 chr20 60142392 60142464 -6525541 + (GA)n Simple_repeat Simple_repeat 2 73 0 231 88 0 0 chr20 60142984 60143018 -6524987 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 205 337 168 10 chr20 60143077 60143273 -6524732 + MIR SINE MIR 18 244 -18 315 178 41 14 chr20 60143634 60143707 -6524298 - MIR SINE MIR -71 191 117 1713 224 135 0 chr20 60143925 60144368 -6523637 + MLT1D LTR MaLR 3 505 0 342 257 28 37 chr20 60145015 60145124 -6522881 + MIR3 SINE MIR 10 117 -91 227 265 176 0 chr20 60145197 60145265 -6522740 + L2 LINE L2 3191 3270 -2 259 96 39 0 chr20 60145666 60145718 -6522287 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 555 185 9 9 chr20 60145935 60146043 -6521962 + MER103 DNA DNA 14 121 -45 2056 124 3 13 chr20 60146868 60147183 -6520822 + AluSx SINE Alu 1 312 0 1121 211 38 0 chr20 60147475 60147688 -6520317 + MER58A DNA MER1_type 2 222 -2 473 224 56 0 chr20 60147791 60147898 -6520107 - L2 LINE L2 -1 3271 3159 1542 269 44 20 chr20 60148375 60148825 -6519180 + MLT1J LTR MaLR 36 496 -15 204 67 0 0 chr20 60150336 60150366 -6517639 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 190 311 0 0 chr20 60150409 60150470 -6517535 + L2 LINE L2 2313 2373 -941 432 223 59 87 chr20 60150474 60150790 -6517215 + MLT1F LTR MaLR 3 351 -216 183 80 0 0 chr20 60150799 60150824 -6517181 + (TC)n Simple_repeat Simple_repeat 2 26 0 585 175 35 12 chr20 60150864 60151035 -6516970 + (TCTA)n Simple_repeat Simple_repeat 4 178 0 206 225 0 0 chr20 60151041 60151081 -6516924 + (TCTG)n Simple_repeat Simple_repeat 1 40 0 768 184 4 17 chr20 60151082 60151613 -6516392 + (TCTA)n Simple_repeat Simple_repeat 1 523 0 400 235 145 15 chr20 60151613 60151818 -6516187 - MLT1C LTR MaLR -186 281 46 194 262 12 71 chr20 60151853 60151937 -6516068 + L2 LINE L2 3189 3267 -5 479 174 46 179 chr20 60151951 60152008 -6515997 - MER5A DNA MER1_type 0 189 126 893 165 0 0 chr20 60152008 60152141 -6515864 + FLAM_C SINE Alu 1 133 0 479 174 46 179 chr20 60152141 60152301 -6515704 - MER5A DNA MER1_type -63 126 1 4168 191 25 13 chr20 60152900 60154200 -6513805 - L1MB8 LINE L1 -6 6172 4858 3068 242 61 30 chr20 60154223 60155157 -6512848 - L1ME1 LINE L1 -5 6161 5202 1933 217 22 114 chr20 60155158 60155744 -6512261 - MLT1F LTR MaLR -2 540 9 274 286 136 29 chr20 60155999 60156139 -6511866 - L2 LINE L2 0 3313 3159 198 268 89 8 chr20 60156198 60156321 -6511684 - MIR SINE MIR -71 191 58 183 182 0 0 chr20 60157007 60157040 -6510965 + MIR SINE MIR 109 141 -67 184 262 0 0 chr20 60157066 60157108 -6510897 + L2 LINE L2 3191 3232 -81 965 200 0 0 chr20 60157245 60157425 -6510580 - MER53 DNA DNA 0 189 10 315 308 0 0 chr20 60157449 60157556 -6510449 - MER5A DNA MER1_type -75 114 8 282 351 110 11 chr20 60157705 60157896 -6510109 + MIR SINE MIR 15 224 -38 368 208 13 13 chr20 60159454 60159531 -6508474 + MER116 DNA Mariner 1 77 -3 215 337 70 0 chr20 60159615 60159701 -6508304 - MIR SINE MIR -140 122 31 272 315 212 36 chr20 60160069 60160460 -6507545 - L2 LINE L2 -3 3310 2851 379 300 67 6 chr20 60161535 60161700 -6506305 + MIR SINE MIR 32 208 -54 519 250 28 7 chr20 60161753 60161897 -6506108 + MER106B DNA MER1_type 902 1048 -11 983 271 8 4 chr20 60161990 60162237 -6505768 + MIR SINE MIR 15 262 0 557 266 96 52 chr20 60162759 60163198 -6504807 + L2 LINE L2 2855 3312 -1 211 178 48 0 chr20 60163798 60163852 -6504153 + MIR SINE MIR 92 140 -68 296 306 134 29 chr20 60164100 60164309 -6503696 - MIR SINE MIR -1 261 31 367 76 0 45 chr20 60164314 60164380 -6503625 + (TCCC)n Simple_repeat Simple_repeat 3 65 0 2024 154 0 0 chr20 60165230 60165541 -6502464 + AluJb SINE Alu 1 311 -1 213 347 11 0 chr20 60167001 60167096 -6500909 - MIR SINE MIR -128 134 39 525 293 17 17 chr20 60167126 60167300 -6500705 + MIR SINE MIR 65 238 -24 244 329 144 7 chr20 60168714 60168860 -6499145 - MIR SINE MIR -48 214 49 3317 202 43 18 chr20 60168866 60169608 -6498397 - L1MB8 LINE L1 -1 6177 5417 201 74 0 0 chr20 60170885 60170912 -6497093 + (T)n Simple_repeat Simple_repeat 1 27 0 319 306 153 47 chr20 60171760 60172035 -6495970 - L2 LINE L2 -5 3308 3005 608 232 21 41 chr20 60172077 60172271 -6495734 - MIR SINE MIR -13 249 60 486 169 0 0 chr20 60172833 60172922 -6495083 + (CA)n Simple_repeat Simple_repeat 2 90 0 190 312 170 46 chr20 60173143 60173361 -6494644 + L2 LINE L2 3024 3268 -4 1067 235 132 36 chr20 60173469 60173886 -6494119 + MLT1C LTR MaLR 11 467 0 1146 283 125 21 chr20 60174137 60174649 -6493356 + MLT1K LTR MaLR 10 574 -14 245 322 87 27 chr20 60175164 60175313 -6492692 - MIR SINE MIR -90 172 15 280 198 12 12 chr20 60175313 60175399 -6492606 + GA-rich Low_complexity Low_complexity 1 86 0 367 259 0 42 chr20 60175402 60175764 -6492241 + (TG)n Simple_repeat Simple_repeat 1 346 0 453 261 0 48 chr20 60175789 60175977 -6492028 + (TG)n Simple_repeat Simple_repeat 1 179 0 224 275 11 33 chr20 60176000 60176091 -6491914 + (TG)n Simple_repeat Simple_repeat 1 89 0 181 194 0 75 chr20 60176686 60176753 -6491252 - L2 LINE L2 -92 3221 3160 221 346 106 0 chr20 60176847 60176951 -6491054 + L2 LINE L2 3194 3308 -5 250 288 117 6 chr20 60176989 60177152 -6490853 - L2 LINE L2 -309 3004 2824 304 255 104 0 chr20 60178028 60178134 -6489871 + L2 LINE L2 3137 3253 -19 186 107 0 0 chr20 60178159 60178187 -6489818 - MIR SINE MIR -118 144 117 459 231 161 0 chr20 60178223 60178353 -6489652 - MER96 DNA MER1_type? -22 153 3 183 218 13 26 chr20 60179020 60179098 -6488907 + CT-rich Low_complexity Low_complexity 1 77 0 199 350 31 0 chr20 60179603 60179700 -6488305 + MIR SINE MIR 47 146 -116 193 323 69 46 chr20 60179898 60180028 -6487977 - MIR SINE MIR -5 257 125 319 281 149 0 chr20 60181102 60181216 -6486789 - MIR SINE MIR -118 144 14 292 260 102 8 chr20 60183420 60183547 -6484458 - L2 LINE L2 -610 2704 2566 855 215 142 41 chr20 60184514 60184853 -6483152 + MLT1C LTR MaLR 19 391 -76 386 255 76 27 chr20 60185384 60185568 -6482437 - L2 LINE L2 -248 3065 2873 375 240 269 0 chr20 60187464 60187635 -6480370 + MER20 DNA MER1_type 3 219 0 692 187 0 22 chr20 60188038 60188220 -6479785 + GA-rich Low_complexity Low_complexity 3 180 0 223 129 0 0 chr20 60188228 60188259 -6479746 + (GGGA)n Simple_repeat Simple_repeat 3 33 0 819 159 6 28 chr20 60188267 60188449 -6479556 + GA-rich Low_complexity Low_complexity 3 180 0 317 238 82 41 chr20 60188875 60189022 -6478983 + L2 LINE L2 2909 3061 -252 268 273 34 0 chr20 60189046 60189134 -6478871 + L2 LINE L2 3210 3300 -13 276 269 143 10 chr20 60189268 60189403 -6478602 + MIR SINE MIR 10 159 -49 188 283 0 0 chr20 60190394 60190440 -6477565 - L2 LINE L2 -1 3312 3267 484 294 60 28 chr20 60190561 60190779 -6477226 + MLT1K LTR MaLR 47 271 -317 366 276 0 35 chr20 60191224 60191340 -6476665 + MIR SINE MIR 33 144 -64 610 313 126 30 chr20 60191971 60192446 -6475559 + L2 LINE L2 2763 3282 -31 1781 243 117 31 chr20 60192449 60193057 -6474948 - MLT2F LTR ERVL -3 660 1 681 287 22 26 chr20 60193460 60193728 -6474277 - L1MC4a LINE L1 -1866 5942 5676 335 308 173 45 chr20 60193728 60193994 -6474011 + L2 LINE L2 2965 3264 -8 2343 110 0 0 chr20 60194049 60194357 -6473648 - AluSx SINE Alu -2 310 3 201 334 87 69 chr20 60194440 60194775 -6473230 + L2 LINE L2 2921 3261 -11 2137 94 76 0 chr20 60195251 60195528 -6472477 + AluSx SINE Alu 3 300 -12 964 289 86 48 chr20 60196653 60196777 -6471228 + MLT1K LTR MaLR 100 218 -370 1845 163 3 24 chr20 60196777 60196903 -6471102 + AluJb SINE Alu 13 140 -172 1638 179 96 0 chr20 60196903 60197183 -6470822 + AluJo SINE Alu 1 307 -5 1845 163 3 24 chr20 60197183 60197351 -6470654 + AluJb SINE Alu 140 301 -11 964 289 86 48 chr20 60197351 60197689 -6470316 + MLT1K LTR MaLR 218 580 -8 184 246 0 0 chr20 60198321 60198378 -6469627 - L2 LINE L2 -406 2908 2852 228 301 187 12 chr20 60199027 60199193 -6468812 - L2 LINE L2 -559 2755 2561 196 313 61 10 chr20 60201107 60201206 -6466799 - MIR SINE MIR -3 259 156 214 271 78 54 chr20 60201338 60201467 -6466538 - L2 LINE L2 0 3272 3141 23 33 0 0 chr20 60202671 60202701 -6465304 + GC_rich Low_complexity Low_complexity 1 30 0 212 184 0 0 chr20 60202900 60202938 -6465067 + T-rich Low_complexity Low_complexity 1 38 0 185 86 57 0 chr20 60204367 60204402 -6463603 + (TCTG)n Simple_repeat Simple_repeat 4 40 0 198 0 0 0 chr20 60204799 60204821 -6463184 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 250 238 16 0 chr20 60205151 60205214 -6462791 + MIR3 SINE MIR 105 168 -40 491 274 194 40 chr20 60206842 60207167 -6460838 + L1MC5 LINE L1 7567 7941 -20 195 271 51 17 chr20 60207665 60207724 -6460281 - L3 LINE CR1 0 1577 1517 405 343 25 18 chr20 60208198 60208377 -6459628 + MIR3 SINE MIR 2 184 -24 769 277 23 10 chr20 60208977 60209233 -6458772 - MIR SINE MIR 0 262 5 278 294 29 20 chr20 60210102 60210204 -6457801 + MIR SINE MIR 43 145 -63 350 350 56 0 chr20 60212691 60212888 -6455117 + L1MC4a LINE L1 5710 5917 -1891 234 0 0 0 chr20 60212893 60212919 -6455086 + (T)n Simple_repeat Simple_repeat 1 26 0 2143 102 3 53 chr20 60214679 60215001 -6453004 - AluSx SINE Alu -1 311 6 23 54 0 0 chr20 60215797 60215834 -6452171 + AT_rich Low_complexity Low_complexity 1 37 0 2134 130 0 13 chr20 60215849 60216157 -6451848 - AluSx SINE Alu -8 304 1 549 267 68 11 chr20 60217623 60217799 -6450206 + MIR SINE MIR 28 213 -49 2374 98 0 0 chr20 60218603 60218908 -6449097 - AluSq SINE Alu -8 305 1 39 22 0 0 chr20 60220676 60220722 -6447283 + AT_rich Low_complexity Low_complexity 1 46 0 434 246 65 43 chr20 60220827 60220965 -6447040 + MIR SINE MIR 52 192 -70 1269 153 44 13 chr20 60220998 60221227 -6446778 + MER46A DNA MER2_type 1 236 0 390 21 0 0 chr20 60223606 60223653 -6444352 + (TG)n Simple_repeat Simple_repeat 2 48 0 33 43 0 0 chr20 60223653 60223700 -6444305 + AT_rich Low_complexity Low_complexity 1 47 0 445 239 65 43 chr20 60223805 60223943 -6444062 + MIR SINE MIR 52 192 -70 459 128 93 35 chr20 60223976 60224062 -6443943 + MER46A DNA MER2_type 1 91 -145 1718 113 34 121 chr20 60224070 60224230 -6443775 + MER46B DNA MER2_type 8 4294967288 -2739 2235 97 10 7 chr20 60224230 60224518 -6443487 + AluSq SINE Alu 1 289 -24 1718 113 34 121 chr20 60224518 60224745 -6443260 + MER46B DNA MER2_type -9 236 0 21 0 0 0 chr20 60228732 60228753 -6439252 + AT_rich Low_complexity Low_complexity 1 21 0 2326 59 38 0 chr20 60230550 60230837 -6437168 + AluSg SINE Alu 1 298 -12 255 313 165 28 chr20 60232350 60232526 -6435479 + MARNA DNA Mariner 180 379 -207 2369 95 3 0 chr20 60233320 60233614 -6434391 + AluSx SINE Alu 1 295 -17 2430 75 3 0 chr20 60233614 60233907 -6434098 + AluY SINE Alu 1 295 -16 249 57 0 0 chr20 60234577 60234612 -6433393 + (TG)n Simple_repeat Simple_repeat 2 36 0 278 264 171 23 chr20 60234702 60234831 -6433174 - MIR3 SINE MIR -55 153 6 2355 65 54 0 chr20 60235793 60236087 -6431918 + AluY SINE Alu 1 310 -1 711 192 0 0 chr20 60236103 60236228 -6431777 + AluJo/FLAM SINE Alu 1 125 -177 1238 82 0 0 chr20 60236230 60236376 -6431629 - AluSq/x SINE Alu -166 146 1 210 208 9 179 chr20 60236844 60236897 -6431108 - MIR3 SINE MIR -14 194 166 2250 125 10 0 chr20 60236897 60237200 -6430805 - AluSx SINE Alu -6 306 1 210 208 9 179 chr20 60237200 60237252 -6430753 - MIR3 SINE MIR -42 166 107 540 269 143 86 chr20 60237371 60237721 -6430284 + L1MC4a LINE L1 5881 6250 -1558 1579 251 185 68 chr20 60237880 60238353 -6429652 + L1MC4 LINE L1 6476 6892 -916 570 221 156 0 chr20 60238353 60238507 -6429498 + MER45A DNA AcHobo 1 178 0 1579 251 185 68 chr20 60238507 60239149 -6428856 + L1MC4 LINE L1 6892 7458 -350 7568 16 0 0 chr20 60239149 60240124 -6427881 - L1PA2 LINE L1 -1 6154 5180 2518 81 0 0 chr20 60240130 60240437 -6427568 - AluSq SINE Alu -6 307 1 1579 251 185 68 chr20 60240437 60240529 -6427476 + L1MC4 LINE L1 7462 7709 -99 241 151 0 0 chr20 60240508 60240561 -6427444 - L1MC4 LINE L1 -1337 6705 6653 * 372 146 0 0 chr20 60240611 60240666 -6427339 + Tigger1 DNA MER2_type 2364 2418 0 983 119 7 14 chr20 60240668 60240905 -6427100 + (TG)n Simple_repeat Simple_repeat 1 416 0 275 208 26 26 chr20 60240907 60240984 -6427021 + L1MC4 LINE L1 7960 8036 -6 2202 122 13 0 chr20 60241434 60241738 -6426267 - AluSx SINE Alu -2 310 3 231 188 0 0 chr20 60241973 60242021 -6425984 + (CA)n Simple_repeat Simple_repeat 1 48 0 218 272 25 62 chr20 60242021 60242102 -6425903 + L2 LINE L2 3195 3272 0 182 243 0 0 chr20 60242848 60242885 -6425120 + MIR SINE MIR 220 256 -6 279 0 0 0 chr20 60243544 60243575 -6424430 + (T)n Simple_repeat Simple_repeat 1 31 0 206 261 141 11 chr20 60243575 60243667 -6424338 - L2 LINE L2 -20 3293 3190 333 100 0 0 chr20 60243851 60243901 -6424104 + (T)n Simple_repeat Simple_repeat 1 50 0 21 57 0 0 chr20 60244768 60244803 -6423202 + GC_rich Low_complexity Low_complexity 1 35 0 21 71 0 0 chr20 60244866 60244908 -6423097 + GC_rich Low_complexity Low_complexity 1 42 0 204 237 21 54 chr20 60244960 60245053 -6422952 + (CCGGG)n Simple_repeat Simple_repeat 5 94 0 492 298 35 35 chr20 60245552 60245780 -6422225 + L2 LINE L2 3082 3309 -4 1079 183 0 0 chr20 60246217 60246401 -6421604 - AluSg/x SINE Alu 0 302 119 615 27 0 0 chr20 60247293 60247366 -6420639 + (GAAA)n Simple_repeat Simple_repeat 4 76 0 42 48 0 0 chr20 60247861 60247924 -6420081 + GC_rich Low_complexity Low_complexity 1 63 0 356 301 68 22 chr20 60248801 60248935 -6419070 - MIR3 SINE MIR -68 140 15 438 172 45 10 chr20 60249680 60250102 -6417903 + (TG)n Simple_repeat Simple_repeat 1 437 0 366 149 41 8 chr20 60250146 60250267 -6417738 + (TG)n Simple_repeat Simple_repeat 2 126 0 244 293 121 0 chr20 60251321 60251437 -6416568 + L2 LINE L2 3138 3267 -5 190 231 115 26 chr20 60252002 60252080 -6415925 + L2 LINE L2 3151 3235 -37 300 338 106 13 chr20 60254507 60254658 -6413347 + L2 LINE L2 2890 3054 -259 879 266 143 25 chr20 60254766 60255266 -6412739 - MLT1F1 LTR MaLR -7 560 4 270 271 0 0 chr20 60255307 60255377 -6412628 - L2 LINE L2 -218 3054 2985 237 33 0 0 chr20 60256158 60256188 -6411817 + (GGGTG)n Simple_repeat Simple_repeat 3 32 0 197 32 0 32 chr20 60256223 60256254 -6411751 + (GGGTG)n Simple_repeat Simple_repeat 3 32 0 428 295 134 13 chr20 60257012 60257236 -6410769 + Charlie8 DNA MER1_type 1 251 -2166 1587 270 104 7 chr20 60257858 60258406 -6409599 - MER97a DNA MER1_type? -291 603 3 4062 211 78 21 chr20 60259266 60260440 -6407565 - Charlie1a DNA MER1_type -1 1454 214 273 229 16 0 chr20 60260484 60260545 -6407460 - Charlie1a DNA MER1_type -1321 134 73 1624 161 0 21 chr20 60262726 60263006 -6404999 + AluJo SINE Alu 15 288 -24 380 318 77 31 chr20 60264216 60264502 -6403503 + L1MC4 LINE L1 6989 7287 -755 492 284 93 54 chr20 60264502 60264949 -6403056 + L1MC4a LINE L1 7322 7714 -71 2201 110 17 0 chr20 60264949 60265250 -6402755 - AluSx SINE Alu -6 306 1 492 284 93 54 chr20 60265250 60265325 -6402680 + L1MC4a LINE L1 7714 7785 0 334 217 43 0 chr20 60265846 60265915 -6402090 + MER5A DNA MER1_type 56 127 -62 418 70 35 23 chr20 60265966 60266052 -6401953 + (TCC)n Simple_repeat Simple_repeat 1 87 0 201 74 0 0 chr20 60267018 60267045 -6400960 + (TG)n Simple_repeat Simple_repeat 2 28 0 218 317 74 25 chr20 60268037 60268159 -6399846 - MIR SINE MIR -47 161 33 186 315 37 0 chr20 60271566 60271620 -6396385 - L2 LINE L2 -12 3260 3205 220 184 0 0 chr20 60275478 60275516 -6392489 + MIR SINE MIR 112 149 -59 4126 204 32 6 chr20 60275528 60276632 -6391373 + L1MB3 LINE L1 5057 6182 -1 252 220 27 95 chr20 60276721 60276817 -6391188 + MIR SINE MIR 39 148 -97 550 267 82 83 chr20 60277444 60277936 -6390069 - L2 LINE L2 0 3272 2790 1089 279 35 39 chr20 60278146 60278634 -6389371 + L1MD3 LINE L1 36 521 -5875 234 322 28 49 chr20 60278722 60278865 -6389140 + L1MD3 LINE L1 540 679 -5526 440 158 11 0 chr20 60278865 60278960 -6389045 + GA-rich Low_complexity Low_complexity 2 97 0 981 231 43 43 chr20 60278998 60279531 -6388474 + L1MD3 LINE L1 701 8056 -8 * 2028 211 92 77 chr20 60279499 60280113 -6387892 + L1MEc LINE L1 997 1601 -4614 2504 55 14 0 chr20 60280113 60280406 -6387599 + AluY SINE Alu 1 297 -14 2028 211 92 77 chr20 60280406 60281071 -6386934 + L1MEc LINE L1 1601 2298 -3917 2218 124 48 25 chr20 60281071 60281427 -6386578 + THE1B LTR MaLR 1 364 0 2028 211 92 77 chr20 60281427 60281456 -6386549 + L1MEc LINE L1 2298 2325 -3890 705 194 131 42 chr20 60281473 60281664 -6386341 + MER58C DNA MER1_type 7 214 -1 3379 262 88 34 chr20 60281670 60283191 -6384814 + L1MEc LINE L1 2333 4072 -2143 2263 127 0 6 chr20 60283191 60283505 -6384500 + AluSx SINE Alu 1 312 0 3379 262 88 34 chr20 60283505 60283902 -6384103 + L1MEc LINE L1 4072 4446 -1769 2327 151 39 23 chr20 60283907 60284392 -6383613 + L1MB3 LINE L1 5689 6181 -2 500 304 84 46 chr20 60284409 60284601 -6383404 + L1ME1 LINE L1 1041 1224 -5160 348 24 0 0 chr20 60284601 60284642 -6383363 + (CA)n Simple_repeat Simple_repeat 2 42 0 500 304 84 46 chr20 60284642 60285014 -6382991 + L1ME1 LINE L1 1224 1633 -4751 2191 113 0 0 chr20 60285014 60285320 -6382685 + AluSq SINE Alu 1 306 0 500 304 84 46 chr20 60285320 60285358 -6382647 + L1ME1 LINE L1 1633 1668 -4716 1230 117 0 0 chr20 60285361 60285523 -6382482 - AluSg/x SINE Alu -4 308 147 2247 110 0 7 chr20 60285524 60285825 -6382180 - AluSc SINE Alu -10 299 1 3627 242 94 82 chr20 60285866 60285925 -6382080 + L1ME1 LINE L1 1825 1882 -4500 1576 92 37 0 chr20 60285925 60286142 -6381863 + MER30 DNA MER1_type 4 228 -2 3627 242 94 82 chr20 60286142 60287192 -6380813 + L1ME1 LINE L1 1882 2917 -3465 801 155 23 0 chr20 60287192 60287321 -6380684 - FLAM_C SINE Alu -1 132 1 3627 242 94 82 chr20 60287321 60287724 -6380281 + L1ME1 LINE L1 2917 3313 -3069 2058 135 3 7 chr20 60287724 60288021 -6379984 - AluSx SINE Alu -16 296 1 3627 242 94 82 chr20 60288021 60289080 -6378925 + L1ME1 LINE L1 3313 4387 -1995 180 77 0 0 chr20 60289080 60289106 -6378899 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 3224 222 46 34 chr20 60289117 60289348 -6378657 + L1MA7 LINE L1 4484 4711 -1649 1976 96 0 8 chr20 60289348 60289628 -6378377 + AluSx SINE Alu 34 311 0 3224 222 46 34 chr20 60289628 60291248 -6376757 + L1MA7 LINE L1 4711 6360 0 785 204 151 0 chr20 60291254 60291426 -6376579 + AluSg/x SINE Alu 113 310 0 1599 232 29 18 chr20 60291457 60292063 -6375942 + L1ME1 LINE L1 5410 6017 -385 535 283 38 55 chr20 60292113 60292403 -6375602 + L1ME1 LINE L1 6113 6397 -5 6072 243 58 12 chr20 60292412 60295171 -6372834 + L1MC4 LINE L1 3232 6163 -1 467 263 55 20 chr20 60295737 60295908 -6372097 + MIR3 SINE MIR 6 181 -63 234 213 11 75 chr20 60296304 60296398 -6371607 + (CATCC)n Simple_repeat Simple_repeat 5 92 0 290 141 0 16 chr20 60296824 60296888 -6371117 + (TC)n Simple_repeat Simple_repeat 2 64 0 228 135 0 0 chr20 60296887 60296924 -6371081 + (TA)n Simple_repeat Simple_repeat 2 38 0 * 392 184 30 12 chr20 60296930 60296990 -6371015 + (TCTCTG)n Simple_repeat Simple_repeat 2 59 -113 219 69 0 0 chr20 60296990 60297019 -6370986 + (TA)n Simple_repeat Simple_repeat 2 30 0 392 184 30 12 chr20 60297019 60297126 -6370879 + (TCTCTG)n Simple_repeat Simple_repeat 59 172 0 216 0 0 0 chr20 60297138 60297162 -6370843 + (TG)n Simple_repeat Simple_repeat 2 25 0 189 74 0 0 chr20 60297161 60297188 -6370817 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 306 98 0 0 chr20 60297194 60297245 -6370760 + (TC)n Simple_repeat Simple_repeat 2 52 0 225 274 39 0 chr20 60298651 60298702 -6369303 + MIR SINE MIR 82 134 -74 537 263 4 4 chr20 60298841 60299081 -6368924 + (TGGG)n Simple_repeat Simple_repeat 1 240 0 664 214 11 0 chr20 60299101 60299279 -6368726 + (TGGG)n Simple_repeat Simple_repeat 1 180 0 575 301 6 3 chr20 60299305 60299650 -6368355 + (TGGA)n Simple_repeat Simple_repeat 1 346 0 186 171 49 24 chr20 60301357 60301398 -6366607 + MIR3 SINE MIR 116 157 -51 376 210 12 12 chr20 60302622 60302703 -6365302 + MIR3 SINE MIR 121 201 -7 277 291 16 24 chr20 60303007 60303134 -6364871 + MER117 DNA MER1_type 72 197 0 279 346 143 9 chr20 60305438 60305669 -6362336 - L2 LINE L2 -11 3261 3000 2395 115 22 25 chr20 60305681 60306046 -6361959 + THE1B LTR MaLR 1 364 0 409 294 0 16 chr20 60307443 60307569 -6360436 + MIR SINE MIR 118 241 -21 228 254 0 34 chr20 60308507 60308566 -6359439 + GA-rich Low_complexity Low_complexity 4 60 0 468 310 152 15 chr20 60309481 60309678 -6358327 - MIR SINE MIR -3 259 36 231 314 0 0 chr20 60309788 60309858 -6358147 + MIR SINE MIR 44 113 -149 2865 70 20 5 chr20 60312073 60312471 -6355534 + MLT2A1 LTR ERVL 1 404 -40 244 250 0 0 chr20 60312472 60312528 -6355477 + (TA)n Simple_repeat Simple_repeat 2 57 0 300 103 138 0 chr20 60312528 60312586 -6355419 + MLT2A1 LTR ERVL 386 451 -2 5207 64 19 0 chr20 60312596 60313269 -6354736 - HERVL-A2 LTR ERVL -4968 686 1 325 66 66 33 chr20 60313269 60313330 -6354675 - MLT2A2 LTR ERVL 0 453 391 194 0 39 0 chr20 60315401 60315427 -6352578 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2258 93 0 0 chr20 60315435 60315713 -6352292 - AluSg SINE Alu -32 278 1 189 369 68 0 chr20 60317314 60317417 -6350588 + MIR3 SINE MIR 67 176 -32 321 329 13 86 chr20 60318891 60319125 -6348880 + L1MC5 LINE L1 7522 7738 -223 294 274 38 0 chr20 60319137 60319243 -6348762 + L1MC4 LINE L1 7904 8013 -29 2277 114 0 0 chr20 60319489 60319788 -6348217 - AluSq SINE Alu -14 299 1 186 250 17 33 chr20 60320537 60320597 -6347408 + MIR3 SINE MIR 143 201 -7 3426 209 61 43 chr20 60321460 60322745 -6345260 - L1ME1 LINE L1 -5 6161 4863 210 268 36 0 chr20 60322747 60322803 -6345202 + L2 LINE L2 3256 3313 0 2139 102 28 3 chr20 60322876 60323160 -6344845 + AluSp SINE Alu 6 296 -17 745 263 88 20 chr20 60323161 60323544 -6344461 + L1ME2 LINE L1 5551 6159 -5 21 36 0 0 chr20 60323544 60323572 -6344433 + AT_rich Low_complexity Low_complexity 1 28 0 327 288 42 8 chr20 60324240 60324358 -6343647 + L2 LINE L2 3192 3313 0 2543 80 0 3 chr20 60325105 60325417 -6342588 - AluY SINE Alu 0 311 1 180 125 0 0 chr20 60325486 60325518 -6342487 + (ATG)n Simple_repeat Simple_repeat 2 33 0 197 194 0 0 chr20 60325728 60325764 -6342241 + MIR SINE MIR 118 153 -55 304 198 132 74 chr20 60325980 60326101 -6341904 + HAL1 LINE L1 1150 1277 -1230 300 288 8 34 chr20 60326101 60326219 -6341786 + GA-rich Low_complexity Low_complexity 2 116 0 248 255 43 64 chr20 60326542 60326636 -6341369 + MIR SINE MIR 117 208 -54 2155 94 7 24 chr20 60327250 60327547 -6340458 + AluSg SINE Alu 2 293 -17 906 194 4 66 chr20 60328019 60328246 -6339759 + L1MC5 LINE L1 6964 7176 -785 843 255 88 33 chr20 60328240 60328715 -6339290 + L1MC5 LINE L1 7377 7913 -48 * 228 67 0 0 chr20 60328715 60328745 -6339260 + (TA)n Simple_repeat Simple_repeat 2 31 0 2006 106 0 76 chr20 60328747 60329050 -6338955 - AluSg SINE Alu -30 280 1 393 288 34 11 chr20 60331345 60331522 -6336483 + MIR SINE MIR 58 242 -20 196 244 0 0 chr20 60331805 60331850 -6336155 - L2 LINE L2 -18 3295 3251 250 265 31 41 chr20 60332211 60332309 -6335696 + MIR3 SINE MIR 88 184 -24 185 233 96 41 chr20 60332404 60332477 -6335528 - MER5A DNA MER1_type -63 126 50 385 176 14 0 chr20 60332947 60333021 -6334984 + L2 LINE L2 3198 3272 0 626 245 167 0 chr20 60334161 60334353 -6333652 - MER58A DNA MER1_type 0 224 1 252 303 83 18 chr20 60334356 60334465 -6333540 + L2 LINE L2 3151 3266 -6 259 309 49 0 chr20 60334589 60334670 -6333335 - MIR SINE MIR -6 256 172 186 71 0 0 chr20 60335040 60335068 -6332937 + (TTG)n Simple_repeat Simple_repeat 1 28 0 933 137 0 0 chr20 60335073 60335197 -6332808 - FLAM_C SINE Alu -19 124 1 836 227 76 22 chr20 60336039 60336264 -6331741 - L1MC4a LINE L1 -1832 5976 5740 207 69 0 0 chr20 60336893 60336922 -6331083 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 451 250 14 0 chr20 60340522 60340670 -6327335 + GA-rich Low_complexity Low_complexity 2 151 0 942 153 15 51 chr20 60341045 60341241 -6326764 + MER20 DNA MER1_type 29 217 -2 2235 85 13 29 chr20 60341273 60341579 -6326426 + AluSq SINE Alu 1 301 -12 219 305 186 8 chr20 60341614 60341732 -6326273 + MIR SINE MIR 92 230 -32 375 337 112 12 chr20 60343214 60343624 -6324381 - L2 LINE L2 -553 2761 2311 205 290 29 14 chr20 60345394 60345463 -6322542 + MIR SINE MIR 76 145 -63 283 220 17 0 chr20 60345620 60345679 -6322326 - L2 LINE L2 -2 3270 3211 274 238 50 0 chr20 60345808 60345888 -6322117 + MIR SINE MIR 1 84 -178 1057 207 51 8 chr20 60346460 60346716 -6321289 - Charlie5 DNA MER1_type -112 2500 2234 398 337 21 26 chr20 60346927 60347117 -6320888 - L3 LINE CR1 -175 1402 1214 180 256 0 0 chr20 60348022 60348061 -6319944 + L2 LINE L2 3224 3262 -51 1209 245 154 15 chr20 60349997 60350471 -6317534 + MER77 LTR ERV1 58 597 -8 190 160 40 0 chr20 60351412 60351462 -6316543 + CT-rich Low_complexity Low_complexity 5 56 0 324 267 53 38 chr20 60351554 60351685 -6316320 + MIR SINE MIR 1 133 -129 437 326 94 8 chr20 60352644 60352889 -6315116 + HAL1 LINE L1 2240 2505 -2 325 292 18 0 chr20 60352990 60353103 -6314902 + L1MC4a LINE L1 5772 5886 -1922 467 160 38 160 chr20 60353522 60353579 -6314426 - MER53 DNA DNA -2 187 125 2131 95 33 33 chr20 60353579 60353885 -6314120 - AluSx SINE Alu -6 306 1 467 160 38 160 chr20 60353885 60354040 -6313965 - MER53 DNA DNA -64 125 1 2115 135 3 3 chr20 60354222 60354518 -6313487 - AluSx SINE Alu -16 296 1 1544 186 36 4 chr20 60354657 60354932 -6313073 + AluJo SINE Alu 3 286 -26 245 151 19 0 chr20 60354956 60355009 -6312996 + (TA)n Simple_repeat Simple_repeat 1 54 0 2162 136 0 0 chr20 60356194 60356496 -6311509 + AluSx SINE Alu 1 302 -10 239 360 20 20 chr20 60357964 60358064 -6309941 - MER5A DNA MER1_type -37 152 53 230 323 0 0 chr20 60359713 60359775 -6308230 + MER116 DNA Mariner 19 80 0 292 324 36 14 chr20 60360396 60360535 -6307470 + MIR SINE MIR 31 172 -90 285 234 117 26 chr20 60361690 60361844 -6306161 + MER113 DNA MER1_type? 43 210 -311 2365 102 3 0 chr20 60361998 60362303 -6305702 - AluSg SINE Alu -4 306 1 551 283 94 29 chr20 60362709 60363017 -6304988 - L1MC4a LINE L1 -1851 5957 5630 428 246 0 17 chr20 60363943 60364061 -6303944 + MER20 DNA MER1_type 101 216 -3 548 229 40 34 chr20 60364508 60364683 -6303322 - L1ME4a LINE L1 0 6121 5946 1022 128 75 5 chr20 60364724 60364911 -6303094 - MER20 DNA MER1_type -19 200 1 220 350 86 0 chr20 60365010 60365127 -6302878 + MIR SINE MIR 32 158 -104 180 103 103 0 chr20 60365932 60365971 -6302034 + L2 LINE L2 2910 2952 -320 204 346 13 0 chr20 60366765 60366843 -6301162 - MIR3 SINE MIR -24 184 106 225 305 113 28 chr20 60367274 60367451 -6300554 + L2 LINE L2 3074 3265 -7 225 0 0 0 chr20 60368387 60368412 -6299593 + (CA)n Simple_repeat Simple_repeat 1 25 0 1540 260 131 4 chr20 60368861 60369388 -6298617 - L1MC3 LINE L1 -7 7778 7185 302 252 19 37 chr20 60369391 60369498 -6298507 - MLT1F1 LTR MaLR -450 117 13 1039 260 150 24 chr20 60369501 60369749 -6298256 - L1MC3 LINE L1 -716 7069 6854 2023 132 14 3 chr20 60369749 60370044 -6297961 - AluSx SINE Alu -14 298 1 1039 260 150 24 chr20 60370044 60370249 -6297756 - L1MC3 LINE L1 -931 6854 6559 258 276 133 9 chr20 60370388 60370493 -6297512 + MER20 DNA MER1_type 94 211 -8 274 326 62 23 chr20 60372054 60372183 -6295822 - L2 LINE L2 -3 3269 3136 2371 115 16 40 chr20 60375491 60375864 -6292141 - THE1B LTR MaLR 0 364 1 361 253 84 41 chr20 60375987 60376319 -6291686 + L2 LINE L2 2728 3079 -193 * 442 238 8 33 chr20 60376304 60376426 -6291579 + MIR SINE MIR 18 136 -126 256 347 50 53 chr20 60377210 60377510 -6290495 - MER102b DNA MER1_type 0 341 43 254 260 10 52 chr20 60379265 60379361 -6288644 - L2 LINE L2 -6 3307 3216 433 269 69 0 chr20 60380418 60380578 -6287427 - MER113 DNA MER1_type? -337 184 14 1808 114 59 42 chr20 60381628 60381934 -6286071 - AluSx SINE Alu -1 311 1 227 340 35 14 chr20 60382370 60382511 -6285494 + L1ME LINE L1 5615 5758 -412 373 263 173 8 chr20 60383382 60383515 -6284490 + MIR3 SINE MIR 30 184 -24 195 279 106 75 chr20 60383995 60384260 -6283745 + L2 LINE L2 2336 2608 -706 254 256 34 138 chr20 60384419 60384688 -6283317 + L2 LINE L2 2844 3084 -188 230 316 0 0 chr20 60384812 60384869 -6283136 + L2 LINE L2 3193 3249 -23 194 91 30 0 chr20 60385052 60385085 -6282920 + (CCA)n Simple_repeat Simple_repeat 3 36 0 970 102 27 9 chr20 60385103 60385452 -6282553 + (CCA)n Simple_repeat Simple_repeat 1 536 0 1049 101 19 0 chr20 60385464 60385677 -6282328 + (CCA)n Simple_repeat Simple_repeat 1 217 0 862 76 0 17 chr20 60386320 60386582 -6281423 + AluY SINE Alu 4 310 -1 228 67 0 0 chr20 60386620 60386650 -6281355 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 236 301 43 62 chr20 60387017 60387433 -6280572 + L1M4 LINE L1 4288 4695 -1451 200 347 10 20 chr20 60390616 60390714 -6277291 + L2 LINE L2 3168 3264 -8 547 291 132 14 chr20 60391137 60391357 -6276648 - L3 LINE CR1 -85 1492 1247 1494 132 0 0 chr20 60392452 60392665 -6275340 - AluSx SINE Alu -99 213 1 336 264 11 11 chr20 60393446 60393533 -6274472 + L2 LINE L2 3219 3305 -8 2306 92 3 0 chr20 60393558 60393864 -6274141 + AluSx SINE Alu 1 307 -5 230 270 0 0 chr20 60398096 60398159 -6269846 + C-rich Low_complexity Low_complexity 2 64 0 313 250 91 38 chr20 60399427 60399559 -6268446 + MIR3 SINE MIR 61 199 -9 414 165 0 12 chr20 60399664 60399749 -6268256 + AluJ/FRAM SINE Alu 228 311 -1 346 180 124 119 chr20 60400225 60400419 -6267586 - MER106A DNA MER1_type 0 236 42 202 217 116 14 chr20 60401240 60401309 -6266696 + L3 LINE CR1 1345 1420 -157 224 281 0 0 chr20 60402651 60402708 -6265297 + CT-rich Low_complexity Low_complexity 4 60 0 1379 139 29 0 chr20 60403978 60404186 -6263819 + MER20 DNA MER1_type 3 216 -3 231 330 34 52 chr20 60404924 60405157 -6262848 + L2 LINE L2 2841 3069 -203 27 0 0 0 chr20 60408092 60408119 -6259886 + AT_rich Low_complexity Low_complexity 1 27 0 187 161 0 0 chr20 60412488 60412519 -6255486 + MIR SINE MIR 116 146 -62 192 97 0 0 chr20 60413293 60413324 -6254681 + (GA)n Simple_repeat Simple_repeat 2 32 0 1975 131 17 3 chr20 60414122 60414419 -6253586 - AluSx SINE Alu -11 301 1 2284 85 3 0 chr20 60414551 60414846 -6253159 - AluSg SINE Alu -14 296 1 224 30 30 0 chr20 60415256 60415289 -6252716 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 25 31 0 0 chr20 60415330 60415362 -6252643 + AT_rich Low_complexity Low_complexity 1 32 0 2095 116 3 3 chr20 60415582 60415884 -6252121 - AluSx SINE Alu -10 302 1 2200 91 3 0 chr20 60416631 60416927 -6251078 - AluSq SINE Alu -16 297 1 2184 114 0 13 chr20 60417065 60417381 -6250624 - AluSx SINE Alu 0 312 1 198 103 0 0 chr20 60417885 60417914 -6250091 + (A)n Simple_repeat Simple_repeat 1 29 0 547 208 96 8 chr20 60419783 60419851 -6248154 - MER20 DNA MER1_type -48 171 110 357 62 0 0 chr20 60419851 60419899 -6248106 + (CA)n Simple_repeat Simple_repeat 2 49 0 547 208 96 8 chr20 60419899 60419955 -6248050 - MER20 DNA MER1_type -109 110 36 2215 76 3 3 chr20 60420058 60420347 -6247658 + AluSq SINE Alu 1 289 -24 332 59 69 30 chr20 60420347 60420448 -6247557 + (TA)n Simple_repeat Simple_repeat 1 105 0 995 144 7 0 chr20 60420506 60420659 -6247346 - AluSp SINE Alu -20 293 140 2116 114 7 0 chr20 60422933 60423241 -6244764 - AluSx SINE Alu -2 310 1 1009 96 0 0 chr20 60423241 60423376 -6244629 - AluSq/x SINE Alu -177 135 1 2185 107 3 0 chr20 60426259 60426567 -6241438 + AluSp SINE Alu 5 313 0 308 252 15 15 chr20 60426582 60426713 -6241292 + A-rich Low_complexity Low_complexity 2 132 0 27 49 0 0 chr20 60427268 60427309 -6240696 + AT_rich Low_complexity Low_complexity 1 41 0 261 83 0 0 chr20 60427469 60427505 -6240500 + (TTCC)n Simple_repeat Simple_repeat 1 36 0 234 186 0 0 chr20 60428629 60428672 -6239333 - L2 LINE L2 -1 3312 3270 202 200 0 0 chr20 60433806 60433846 -6234159 + G-rich Low_complexity Low_complexity 3 42 0 195 42 0 0 chr20 60435768 60435792 -6232213 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2096 45 73 3 chr20 60436981 60437270 -6230735 - AluY SINE Alu -2 309 1 22 0 0 0 chr20 60440847 60440869 -6227136 + AT_rich Low_complexity Low_complexity 1 22 0 38 51 0 0 chr20 60443864 60443923 -6224082 + GC_rich Low_complexity Low_complexity 1 59 0 30 0 0 0 chr20 60444209 60444239 -6223766 + GC_rich Low_complexity Low_complexity 1 30 0 22 70 0 0 chr20 60444644 60444687 -6223318 + GC_rich Low_complexity Low_complexity 1 43 0 234 233 0 0 chr20 60444856 60444916 -6223089 + (CGG)n Simple_repeat Simple_repeat 2 61 0 363 145 0 0 chr20 60445070 60445139 -6222866 + (GAA)n Simple_repeat Simple_repeat 2 70 0 192 40 0 0 chr20 60445175 60445200 -6222805 + (CCG)n Simple_repeat Simple_repeat 1 25 0 22 70 0 0 chr20 60445222 60445265 -6222740 + GC_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr20 60445622 60445644 -6222361 + GC_rich Low_complexity Low_complexity 1 22 0 23 86 0 0 chr20 60446045 60446103 -6221902 + GC_rich Low_complexity Low_complexity 1 58 0 204 164 0 36 chr20 60446131 60446186 -6221819 + (CCG)n Simple_repeat Simple_repeat 3 55 0 215 158 0 18 chr20 60446194 60446251 -6221754 + CT-rich Low_complexity Low_complexity 1 56 0 25 0 0 0 chr20 60446284 60446309 -6221696 + GC_rich Low_complexity Low_complexity 1 25 0 198 103 0 0 chr20 60446320 60446349 -6221656 + (CGG)n Simple_repeat Simple_repeat 3 31 0 205 258 16 23 chr20 60446456 60446584 -6221421 + (CCCCG)n Simple_repeat Simple_repeat 2 128 0 237 21 43 43 chr20 60446602 60446649 -6221356 + (CCG)n Simple_repeat Simple_repeat 2 48 0 64 62 0 0 chr20 60446792 60446905 -6221100 + GC_rich Low_complexity Low_complexity 1 113 0 21 82 0 0 chr20 60446984 60447033 -6220972 + GC_rich Low_complexity Low_complexity 1 49 0 258 179 0 0 chr20 60447046 60447102 -6220903 + CT-rich Low_complexity Low_complexity 1 56 0 220 256 0 0 chr20 60447264 60447307 -6220698 + G-rich Low_complexity Low_complexity 2 44 0 222 37 0 0 chr20 60447985 60448012 -6219993 + (T)n Simple_repeat Simple_repeat 1 27 0 29 0 0 0 chr20 60448166 60448195 -6219810 + AT_rich Low_complexity Low_complexity 1 29 0 210 234 40 0 chr20 60449062 60449128 -6218877 - MIR SINE MIR -23 185 112 243 103 0 0 chr20 60451544 60451583 -6216422 + (A)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr20 60452489 60452510 -6215495 + AT_rich Low_complexity Low_complexity 1 21 0 421 163 10 10 chr20 60454572 60454670 -6213335 + (CA)n Simple_repeat Simple_repeat 1 98 0 2206 81 13 13 chr20 60457648 60457956 -6210049 - AluSx SINE Alu -2 310 3 2238 87 0 0 chr20 60461465 60461752 -6206253 - AluSg SINE Alu -23 287 1 204 235 0 0 chr20 60463724 60463775 -6204230 + A-rich Low_complexity Low_complexity 1 51 0 22 35 0 0 chr20 60466074 60466103 -6201902 + AT_rich Low_complexity Low_complexity 1 29 0 235 274 235 0 chr20 60466538 60466640 -6201365 + L1P LINE L1 4878 5003 -1143 332 276 173 8 chr20 60466845 60466972 -6201033 + L1ME3A LINE L1 5260 5407 -2401 189 310 193 7 chr20 60467903 60468048 -6199957 - MIR SINE MIR -90 172 1 2386 57 0 0 chr20 60468492 60468773 -6199232 + AluY SINE Alu 19 299 -12 465 255 56 61 chr20 60469156 60469387 -6198618 - L2 LINE L2 -96 3217 2988 2009 91 3 54 chr20 60469442 60469765 -6198240 + AluSx SINE Alu 1 308 0 384 186 12 12 chr20 60469765 60469851 -6198154 - MIR SINE MIR -11 251 166 430 244 90 8 chr20 60470148 60470323 -6197682 - MLT1L LTR MaLR -1 614 399 311 111 0 19 chr20 60470519 60470573 -6197432 + (TCCC)n Simple_repeat Simple_repeat 4 56 0 1911 165 0 3 chr20 60470585 60470882 -6197123 - AluSx SINE Alu -16 296 1 2246 117 3 0 chr20 60470927 60471236 -6196769 - AluSq SINE Alu -1 312 3 225 260 21 21 chr20 60471357 60471453 -6196552 + L1M4 LINE L1 3338 3433 -2713 623 239 38 6 chr20 60471557 60471716 -6196289 + L1ME3A LINE L1 5987 6150 -20 22 0 0 0 chr20 60471716 60471738 -6196267 + AT_rich Low_complexity Low_complexity 1 22 0 658 295 69 51 chr20 60471743 60472427 -6195578 + L1M4 LINE L1 3510 4205 -1941 1849 83 115 18 chr20 60472431 60472709 -6195296 + AluSc SINE Alu 4 308 -1 929 207 0 0 chr20 60472709 60472873 -6195132 + AluJb SINE Alu 134 297 -15 994 180 7 7 chr20 60473002 60473152 -6194853 + FRAM SINE Alu 2 151 -15 22 0 0 0 chr20 60473152 60473174 -6194831 + AT_rich Low_complexity Low_complexity 1 22 0 881 160 0 0 chr20 60473182 60473313 -6194692 + AluJo SINE Alu 1 131 -171 2291 112 0 13 chr20 60473371 60473683 -6194322 + AluSg SINE Alu 1 308 -2 376 213 61 73 chr20 60473712 60473876 -6194129 - L1MC5 LINE L1 -407 7554 7393 471 204 159 40 chr20 60473937 60474113 -6193892 + L1MC5 LINE L1 7611 7807 -154 576 244 17 0 chr20 60474166 60474285 -6193720 + MER63A DNA MER1_type 53 173 -37 389 231 0 0 chr20 60474310 60474388 -6193617 + L1MC5 LINE L1 7808 7885 -76 926 200 38 0 chr20 60474435 60474595 -6193410 + AluJo SINE Alu 137 302 0 1833 154 0 39 chr20 60474675 60474981 -6193024 + AluJb SINE Alu 1 294 -18 552 204 138 124 chr20 60474993 60475130 -6192875 - MIR SINE MIR 0 262 119 2334 100 7 0 chr20 60475130 60475439 -6192566 + AluSx SINE Alu 1 311 -1 552 204 138 124 chr20 60475439 60475526 -6192479 - MIR SINE MIR -143 119 35 454 171 105 0 chr20 60475565 60475670 -6192335 - LTR9B LTR ERV1 -84 560 445 510 307 135 39 chr20 60476080 60476435 -6191570 - L2 LINE L2 -1 3312 2924 219 329 0 0 chr20 60476650 60476723 -6191282 + L2 LINE L2 3236 3308 -5 1881 120 0 29 chr20 60478336 60478612 -6189393 + AluSx SINE Alu 39 306 -6 195 42 0 0 chr20 60479133 60479157 -6188848 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 314 309 94 17 chr20 60479267 60479448 -6188557 + L1M4 LINE L1 4065 4259 -1887 259 178 27 62 chr20 60479766 60479912 -6188093 + (TTATA)n Simple_repeat Simple_repeat 4 144 0 235 143 14 29 chr20 60479942 60480012 -6187993 + (TTATA)n Simple_repeat Simple_repeat 5 73 0 266 153 17 0 chr20 60480086 60480145 -6187860 + (TTATA)n Simple_repeat Simple_repeat 5 64 0 212 204 0 19 chr20 60480242 60480296 -6187709 + (TTATA)n Simple_repeat Simple_repeat 1 53 0 353 280 51 0 chr20 60480307 60480425 -6187580 - MIR SINE MIR -123 139 16 233 197 13 0 chr20 60480536 60480612 -6187393 + (TG)n Simple_repeat Simple_repeat 2 78 0 1046 98 0 0 chr20 60480642 60480775 -6187230 + AluJb SINE Alu 7 139 -173 1051 131 149 0 chr20 60480778 60480953 -6187052 - MER30 DNA MER1_type -29 201 1 1845 166 3 0 chr20 60481857 60482152 -6185853 - AluJb SINE Alu -16 296 1 709 306 109 14 chr20 60482293 60482659 -6185346 - MLT1I LTR MaLR 0 409 9 247 224 199 68 chr20 60482904 60483065 -6184940 - L2 LINE L2 -1191 2123 1942 355 179 154 24 chr20 60483070 60483193 -6184812 + L1MC5 LINE L1 7768 7906 -55 2394 91 0 7 chr20 60483196 60483504 -6184501 - AluSq SINE Alu -7 306 1 430 260 75 50 chr20 60483607 60483807 -6184198 + MLT1G1 LTR MaLR 3 207 -388 974 144 54 59 chr20 60483862 60483905 -6184100 - L1MB2 LINE L1 -9 6162 6120 2345 62 14 0 chr20 60483905 60484194 -6183811 - AluY SINE Alu -18 293 1 974 144 54 59 chr20 60484194 60484372 -6183633 - L1MB2 LINE L1 -51 6120 5942 472 290 152 13 chr20 60484372 60484684 -6183321 + MLT1G1 LTR MaLR 215 520 -10 603 303 181 17 chr20 60484718 60484816 -6183189 - L2 LINE L2 -1498 1816 1735 2310 118 0 6 chr20 60484816 60485131 -6182874 - AluSq SINE Alu 0 313 1 603 303 181 17 chr20 60485131 60485728 -6182277 - L2 LINE L2 -1579 1735 1007 462 79 0 0 chr20 60485736 60485799 -6182206 + (TG)n Simple_repeat Simple_repeat 1 63 0 365 305 55 6 chr20 60485821 60485985 -6182020 + L1ME LINE L1 5604 5775 -346 364 324 55 0 chr20 60486149 60486287 -6181718 + MLT1K LTR MaLR 432 580 -8 2019 173 43 11 chr20 60486287 60486639 -6181366 + MLT1A1 LTR MaLR 1 363 -2 342 235 115 49 chr20 60487035 60487712 -6180293 - L1MC5 LINE L1 -236 7725 6969 22 0 0 0 chr20 60487720 60487742 -6180263 + AT_rich Low_complexity Low_complexity 1 22 0 1633 101 36 0 chr20 60487823 60488042 -6179963 + L1PA10 LINE L1 5939 6165 -3 1901 148 0 7 chr20 60488079 60488362 -6179643 + AluJb SINE Alu 11 291 -21 2277 92 0 0 chr20 60488368 60488660 -6179345 + AluSq SINE Alu 1 292 -21 12898 165 19 19 chr20 60488685 60488981 -6179024 + L1MB7 LINE L1 2636 2931 -3215 1567 191 67 0 chr20 60488981 60489264 -6178741 + AluJo SINE Alu 1 302 -10 12898 165 19 19 chr20 60489264 60490631 -6177374 + L1MB7 LINE L1 2931 4297 -1849 2381 96 6 3 chr20 60490631 60490943 -6177062 + AluSq SINE Alu 1 313 0 12898 165 19 19 chr20 60490943 60491658 -6176347 + L1MB7 LINE L1 4297 5018 -1128 2258 102 0 7 chr20 60491658 60491953 -6176052 + AluSx SINE Alu 1 293 -19 12898 165 19 19 chr20 60491953 60492047 -6175958 + L1MB7 LINE L1 5017 5110 -1036 1102 186 46 133 chr20 60492048 60492463 -6175542 - L1M4 LINE L1 -1185 5459 5081 4135 222 75 30 chr20 60492480 60492510 -6175495 - L1M4 LINE L1 -5393 1149 1122 2074 139 3 0 chr20 60492510 60492805 -6175200 - AluSx SINE Alu -16 296 1 4135 222 75 30 chr20 60492805 60493792 -6174213 - L1M4 LINE L1 -5420 1122 86 602 99 25 0 chr20 60493792 60493873 -6174132 + AluSg/x SINE Alu 219 301 -11 432 217 11 0 chr20 60493875 60493967 -6174038 - L1M4 LINE L1 -6448 94 2 7756 189 93 110 chr20 60493969 60495300 -6172705 - Cheshire DNA MER1_type -7 2413 1061 2489 61 0 23 chr20 60495300 60495610 -6172395 + AluY SINE Alu 1 303 -8 7756 189 93 110 chr20 60495610 60495703 -6172302 - Cheshire DNA MER1_type -1359 1061 968 2212 110 0 0 chr20 60495703 60495993 -6172012 + AluSx SINE Alu 1 290 -22 308 23 45 0 chr20 60495996 60496040 -6171965 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 1213 151 0 0 chr20 60496044 60496229 -6171776 + AluSg/x SINE Alu 126 310 0 7756 189 93 110 chr20 60496229 60497065 -6170940 - Cheshire DNA MER1_type -1457 963 1 2190 132 0 0 chr20 60497085 60497388 -6170617 - AluSx SINE Alu -9 303 1 2681 203 145 11 chr20 60497643 60498284 -6169721 + L1MB7 LINE L1 5445 6171 -13 2202 107 23 10 chr20 60498457 60498766 -6169239 + AluSq SINE Alu 1 313 0 2386 92 0 0 chr20 60498905 60499210 -6168795 - AluSg SINE Alu -5 305 1 2473 84 0 0 chr20 60500273 60500581 -6167424 + AluSx SINE Alu 5 312 0 2268 102 3 0 chr20 60501394 60501688 -6166317 - AluSx SINE Alu -17 295 1 2043 134 24 0 chr20 60501698 60501988 -6166017 - AluSx SINE Alu -15 297 1 530 72 0 0 chr20 60502252 60502321 -6165684 + HSMAR1 DNA Mariner 4 72 -1215 9138 84 17 4 chr20 60503337 60504549 -6163456 + HSMAR1 DNA Mariner 57 1284 -3 24 77 0 0 chr20 60504551 60504603 -6163402 + AT_rich Low_complexity Low_complexity 1 52 0 359 71 83 30 chr20 60504603 60504771 -6163234 + (TA)n Simple_repeat Simple_repeat 1 177 0 1544 193 30 0 chr20 60504807 60505076 -6162929 - AluJb SINE Alu -31 281 5 726 144 0 124 chr20 60505413 60505566 -6162439 + AluJb SINE Alu 2 135 -177 2028 105 0 34 chr20 60505779 60506114 -6161891 - AluSx SINE Alu 0 325 1 9483 219 45 22 chr20 60506153 60507019 -6160986 + L1ME LINE L1 2597 3441 -2705 1595 109 0 0 chr20 60507019 60507230 -6160775 + AluSg/x SINE Alu 84 294 -18 9483 219 45 22 chr20 60507230 60508998 -6159007 + L1ME LINE L1 3441 5293 -853 5018 90 46 15 chr20 60508988 60509279 -6158726 + L1PB1 LINE L1 5389 5669 -482 * 2256 116 0 0 chr20 60509279 60509581 -6158424 + AluSx SINE Alu 1 302 -10 5018 90 46 15 chr20 60509581 60509685 -6158320 + L1PB1 LINE L1 5669 5768 -383 354 45 0 0 chr20 60509685 60509729 -6158276 + (CA)n Simple_repeat Simple_repeat 2 45 0 5018 90 46 15 chr20 60509729 60510069 -6157936 + L1PB1 LINE L1 5768 6148 -3 256 251 71 0 chr20 60510070 60510179 -6157826 + L1ME LINE L1 5281 5396 -782 267 103 0 0 chr20 60510205 60510244 -6157761 + (A)n Simple_repeat Simple_repeat 1 39 0 692 197 48 96 chr20 60510244 60510452 -6157553 + L1ME LINE L1 5383 5580 -586 716 183 18 95 chr20 60510457 60510626 -6157379 + AluJo SINE Alu 7 162 -150 266 215 62 0 chr20 60510626 60510691 -6157314 + L1ME LINE L1 5593 5661 -505 1024 169 0 12 chr20 60510832 60510998 -6157007 + FRAM SINE Alu 1 160 -16 418 179 12 12 chr20 60511000 60511084 -6156921 + L1MC5 LINE L1 7314 7397 -564 6926 123 62 60 chr20 60511158 60511641 -6156364 - Tigger3b DNA MER2_type -1797 1231 750 2045 119 7 20 chr20 60511641 60511944 -6156061 - AluSx SINE Alu -11 301 3 6926 123 62 60 chr20 60511944 60512405 -6155600 - Tigger3b DNA MER2_type -2278 750 281 2001 104 11 32 chr20 60512405 60512711 -6155294 + AluSq SINE Alu 11 310 0 6926 123 62 60 chr20 60512711 60512993 -6155012 - Tigger3b DNA MER2_type -2747 281 1 316 247 14 0 chr20 60513056 60513129 -6154876 + L1MC4 LINE L1 6750 6823 -1219 243 173 0 39 chr20 60513129 60513181 -6154824 + Tigger3(Golem) DNA MER2_type 222 271 -2758 866 196 190 19 chr20 60513209 60513359 -6154646 + L1MC4 LINE L1 6871 6994 -1048 2030 144 0 0 chr20 60513359 60513682 -6154323 + AluSx SINE Alu 1 323 0 866 196 190 19 chr20 60513682 60513846 -6154159 + L1MC4 LINE L1 6994 7240 -802 390 191 9 61 chr20 60513859 60513974 -6154031 + L1ME LINE L1 41 149 -5921 2066 139 6 19 chr20 60514145 60514461 -6153544 - AluSx SINE Alu 0 312 1 742 278 33 61 chr20 60514981 60515438 -6152567 + L1ME LINE L1 498 941 -5129 291 199 72 143 chr20 60515451 60515536 -6152469 + L1MC5 LINE L1 7563 7653 -308 2144 141 0 0 chr20 60515536 60515834 -6152171 + AluSx SINE Alu 1 298 -14 291 199 72 143 chr20 60515834 60516055 -6151950 + L1MC5 LINE L1 7653 7847 -114 243 143 18 36 chr20 60516212 60516268 -6151737 + CT-rich Low_complexity Low_complexity 5 59 0 1624 158 124 0 chr20 60516353 60516618 -6151387 + AluJo SINE Alu 1 298 -4 329 279 49 69 chr20 60517026 60517230 -6150775 + MLT1K LTR MaLR 315 514 -74 2218 104 0 7 chr20 60517235 60517543 -6150462 - AluSg SINE Alu -4 306 1 406 252 95 17 chr20 60517611 60517847 -6150158 - LTR16A1 LTR ERVL 0 491 168 6144 139 67 37 chr20 60518081 60518385 -6149620 + L1MCa LINE L1 286 579 -5847 212 31 62 0 chr20 60518385 60518417 -6149588 + A-rich Low_complexity Low_complexity 2 35 0 6144 139 67 37 chr20 60518417 60518715 -6149290 + L1MCa LINE L1 579 867 -5559 186 71 0 0 chr20 60518715 60518743 -6149262 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 6144 139 67 37 chr20 60518743 60519066 -6148939 + L1MCa LINE L1 867 1179 -5247 2271 121 3 16 chr20 60519066 60519350 -6148655 + AluSq SINE Alu 1 282 -31 181 0 0 0 chr20 60519350 60519370 -6148635 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2271 121 3 16 chr20 60519370 60519400 -6148605 + AluSq SINE Alu 282 311 -2 6144 139 67 37 chr20 60519400 60519600 -6148405 + L1MCa LINE L1 1179 1372 -5054 180 97 0 0 chr20 60519600 60519631 -6148374 + (CAA)n Simple_repeat Simple_repeat 1 31 0 6144 139 67 37 chr20 60519631 60520178 -6147827 + L1MCa LINE L1 1372 2063 -4363 923 168 0 36 chr20 60520985 60521152 -6146853 - FRAM SINE Alu -10 166 6 2232 80 14 10 chr20 60521385 60521674 -6146331 - AluY SINE Alu -9 302 13 2089 136 0 17 chr20 60521705 60522006 -6145999 - AluSx SINE Alu -16 296 1 * 2387 113 7 0 chr20 60522005 60522315 -6145690 - AluSx SINE Alu 0 312 1 700 229 80 28 chr20 60523608 60523896 -6144109 - L1MC5 LINE L1 -49 7912 7610 6392 152 12 18 chr20 60523912 60525619 -6142386 + L1MA4 LINE L1 4122 5823 -477 1445 163 97 21 chr20 60525619 60525908 -6142097 + AluJo SINE Alu 1 311 -1 6392 152 12 18 chr20 60525908 60526104 -6141901 + L1MA4 LINE L1 5823 6019 -281 494 280 68 21 chr20 60526300 60526536 -6141469 - L1MC5 LINE L1 -389 7572 7326 740 249 111 0 chr20 60526817 60527006 -6140999 - MER58C DNA MER1_type -3 212 3 308 294 64 0 chr20 60527018 60527127 -6140878 - L1MC5 LINE L1 -844 7117 7002 1717 165 3 18 chr20 60527134 60527419 -6140586 + AluJb SINE Alu 15 295 -17 2510 70 3 16 chr20 60527421 60527736 -6140269 + AluY SINE Alu 1 311 0 343 305 102 38 chr20 60527994 60528230 -6139775 + LTR16C LTR ERVL 149 399 -92 930 217 0 0 chr20 60528425 60528634 -6139371 + FRAM SINE Alu 1 176 0 1857 176 26 7 chr20 60528634 60528940 -6139065 + AluSx SINE Alu 1 312 0 455 156 0 11 chr20 60528944 60529034 -6138971 + GA-rich Low_complexity Low_complexity 1 89 0 1477 264 115 34 chr20 60529047 60529489 -6138516 - L1MEc LINE L1 -3930 3208 2803 2436 81 3 0 chr20 60529489 60529787 -6138218 - AluSc SINE Alu -10 299 1 1477 264 115 34 chr20 60529787 60529823 -6138182 - L1MEc LINE L1 -4335 2803 2771 2191 114 3 31 chr20 60529823 60530140 -6137865 + AluSq SINE Alu 1 308 -5 1477 264 115 34 chr20 60530140 60530562 -6137443 - L1MEc LINE L1 -4367 2771 2257 508 274 39 29 chr20 60530590 60530794 -6137211 - L1MEc LINE L1 -6647 212 7 743 340 33 27 chr20 60530806 60530909 -6137096 - L2 LINE L2 -530 2784 2683 1909 196 167 16 chr20 60530909 60531400 -6136605 - MLT1F1 LTR MaLR -2 565 1 743 340 33 27 chr20 60531400 60531664 -6136341 - L2 LINE L2 -631 2683 2415 345 164 0 45 chr20 60531671 60531781 -6136224 + CT-rich Low_complexity Low_complexity 1 105 0 188 328 49 0 chr20 60531873 60531934 -6136071 + L2 LINE L2 3010 3073 -240 253 215 215 0 chr20 60532001 60532080 -6135925 + L2 LINE L2 3176 3271 -1 2280 110 0 38 chr20 60532122 60532440 -6135565 - AluSx SINE Alu -6 306 1 2640 53 0 3 chr20 60532594 60532898 -6135107 - AluY SINE Alu -8 303 1 329 316 19 13 chr20 60533266 60533421 -6134584 + L2 LINE L2 2268 2423 -891 241 337 12 0 chr20 60533721 60533804 -6134201 - MIR SINE MIR -1 261 178 503 307 184 23 chr20 60533841 60534277 -6133728 + L2 LINE L2 2807 3312 -1 1692 158 44 37 chr20 60534375 60534672 -6133333 - AluJo SINE Alu -13 299 1 286 247 0 0 chr20 60534741 60534818 -6133187 + L1PA16 LINE L1 5952 6028 -138 308 100 86 0 chr20 60534836 60534906 -6133099 + L1PA16 LINE L1 6089 6164 -2 291 200 35 24 chr20 60535052 60535137 -6132868 + ORSL DNA AcHobo 15 100 -175 2393 91 10 0 chr20 60535144 60535504 -6132501 - AluSq SINE Alu 0 363 1 2392 98 0 0 chr20 60535505 60535812 -6132193 - AluSx SINE Alu -5 307 1 227 67 0 0 chr20 60535836 60535866 -6132139 + ORSL DNA AcHobo 185 214 -61 228 284 0 18 chr20 60536065 60536198 -6131807 + C-rich Low_complexity Low_complexity 1 130 0 22 0 0 0 chr20 60536336 60536358 -6131647 + GC_rich Low_complexity Low_complexity 1 22 0 43 35 0 0 chr20 60536449 60536506 -6131499 + GC_rich Low_complexity Low_complexity 1 57 0 24 53 0 0 chr20 60536598 60536636 -6131369 + GC_rich Low_complexity Low_complexity 1 38 0 192 350 20 30 chr20 60536966 60537066 -6130939 - MER5A DNA MER1_type -28 161 63 2395 99 0 3 chr20 60537066 60537380 -6130625 - AluSq SINE Alu 0 313 1 274 380 63 0 chr20 60537788 60537946 -6130059 - MIR SINE MIR -60 202 35 2299 112 7 0 chr20 60538054 60538358 -6129647 - AluSq SINE Alu -7 306 1 2250 93 48 0 chr20 60538358 60538648 -6129357 - AluSx SINE Alu -8 304 1 219 301 194 0 chr20 60538663 60538766 -6129239 - MIR3 SINE MIR -8 200 78 473 321 128 27 chr20 60539130 60539757 -6128248 - L2 LINE L2 -457 2857 2168 978 185 62 0 chr20 60539950 60540161 -6127844 - MER58A DNA MER1_type 0 224 1 643 319 27 19 chr20 60540606 60540866 -6127139 - MIR SINE MIR 0 262 1 1459 174 65 31 chr20 60541271 60541565 -6126440 - AluJb SINE Alu -8 304 1 883 301 93 5 chr20 60543036 60543455 -6124550 - LTR16B LTR ERVL -4 460 5 2424 90 3 13 chr20 60545037 60545347 -6122658 + AluSp SINE Alu 1 307 -6 1312 155 186 0 chr20 60547537 60547789 -6120216 + AluJb SINE Alu 2 300 -2 2465 88 7 0 chr20 60549204 60549512 -6118493 + AluSp SINE Alu 1 310 -3 424 209 79 51 chr20 60551256 60551433 -6116572 + MER20 DNA MER1_type 31 212 -7 2234 113 0 16 chr20 60551797 60552107 -6115898 + AluJb SINE Alu 1 305 -7 2187 66 0 19 chr20 60553200 60553499 -6114506 + AluSq SINE Alu 20 313 0 890 125 31 0 chr20 60553501 60553629 -6114376 + AluJo SINE Alu 4 135 -177 22 0 0 0 chr20 60553629 60553651 -6114354 + AT_rich Low_complexity Low_complexity 1 22 0 2340 112 0 0 chr20 60553946 60554251 -6113754 - AluSx SINE Alu 0 312 8 2527 57 0 0 chr20 60554710 60555007 -6112998 + AluY SINE Alu 1 297 -14 2235 95 3 3 chr20 60555018 60555326 -6112679 + AluSp SINE Alu 1 308 0 2263 105 3 0 chr20 60555751 60556045 -6111960 - AluSx SINE Alu -11 301 7 205 245 19 0 chr20 60556721 60556774 -6111231 + L2 LINE L2 3003 3056 -257 258 276 69 26 chr20 60557966 60558082 -6109923 + L2 LINE L2 1912 2032 -1282 788 240 0 12 chr20 60558331 60558502 -6109503 + Tigger5 DNA MER2_type 2155 2323 0 180 280 191 6 chr20 60558520 60558677 -6109328 - L2 LINE L2 -180 3133 2948 508 281 205 20 chr20 60558729 60559217 -6108788 - L2 LINE L2 -492 2822 2245 274 319 120 0 chr20 60559544 60559760 -6108245 - L2 LINE L2 -1764 1550 1309 200 257 138 46 chr20 60560256 60560365 -6107640 + MIR SINE MIR 39 157 -105 274 263 18 47 chr20 60562023 60562194 -6105811 + C-rich Low_complexity Low_complexity 4 169 0 21 0 0 0 chr20 60562379 60562400 -6105605 + GC_rich Low_complexity Low_complexity 1 21 0 317 210 0 0 chr20 60563993 60564055 -6103950 + MER45 DNA AcHobo 1520 1581 0 2310 119 0 3 chr20 60564438 60564749 -6103256 - AluSg SINE Alu 0 310 1 221 299 122 19 chr20 60565777 60565884 -6102121 - MIR SINE MIR -97 165 48 21 0 0 0 chr20 60565888 60565909 -6102096 + AT_rich Low_complexity Low_complexity 1 21 0 3744 139 14 22 chr20 60566444 60566922 -6101083 - MER41B LTR ERV1 0 635 162 2294 107 0 10 chr20 60566922 60567231 -6100774 - AluSq SINE Alu -7 306 1 3744 139 14 22 chr20 60567231 60567392 -6100613 - MER41B LTR ERV1 -473 162 1 412 262 139 21 chr20 60567610 60567797 -6100208 - L2 LINE L2 -10 3303 3095 242 294 65 0 chr20 60568539 60568631 -6099374 + MIR SINE MIR 34 131 -77 249 270 252 0 chr20 60571227 60571342 -6096663 - L2 LINE L2 -10 3262 3119 639 303 36 31 chr20 60571857 60572246 -6095759 - L1MC4 LINE L1 -11 8031 7641 2178 121 0 3 chr20 60573334 60573631 -6094374 - AluSx SINE Alu -16 296 1 1719 165 0 11 chr20 60574828 60575100 -6092905 - AluJb SINE Alu -42 270 2 2289 95 3 0 chr20 60575112 60575406 -6092599 - AluSq SINE Alu -18 295 1 421 145 29 0 chr20 60575887 60575956 -6092049 - L1M3 LINE L1 -403 5768 5698 2321 116 0 7 chr20 60576635 60576977 -6091028 + AluSq SINE Alu 1 313 0 2141 82 61 0 chr20 60576977 60577257 -6090748 + AluSc SINE Alu 1 297 -12 197 326 146 0 chr20 60583062 60583151 -6084854 + MIR SINE MIR 29 130 -78 287 200 232 0 chr20 60585510 60585605 -6082400 + L1ME4a LINE L1 5957 6073 -48 191 278 56 33 chr20 60586099 60586189 -6081816 + MIR SINE MIR 49 140 -122 27 0 0 0 chr20 60587416 60587443 -6080562 + GC_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr20 60589850 60589878 -6078127 + AT_rich Low_complexity Low_complexity 1 28 0 246 206 300 44 chr20 60590380 60590540 -6077465 + L2 LINE L2 2773 2973 -341 362 238 9 29 chr20 60590684 60590789 -6077216 + L2 LINE L2 3201 3303 -10 307 234 0 0 chr20 60590957 60591034 -6076971 + MER106B DNA MER1_type 983 1059 0 583 274 75 0 chr20 60591058 60591244 -6076761 - MIR SINE MIR -15 247 48 21 0 0 0 chr20 60593572 60593593 -6074412 + AT_rich Low_complexity Low_complexity 1 21 0 314 370 19 0 chr20 60595589 60595751 -6072254 - L2 LINE L2 -932 2382 2218 2119 92 0 77 chr20 60596353 60596678 -6071327 + AluSx SINE Alu 1 300 -12 324 295 185 0 chr20 60598419 60598673 -6069332 + L2 LINE L2 3012 3312 -1 248 256 39 0 chr20 60598721 60598799 -6069206 + L2 LINE L2 3170 3250 -63 2195 117 0 20 chr20 60600057 60600357 -6067648 - AluSx SINE Alu -17 295 2 4812 87 44 0 chr20 60600680 60601312 -6066693 - PABL_A LTR ERV1 0 660 1 444 218 0 0 chr20 60601358 60601436 -6066569 + MER21B LTR ERV1 20 97 -766 239 282 113 8 chr20 60601456 60601580 -6066425 + MER21A LTR ERV1 748 884 -47 232 164 16 49 chr20 60601626 60601687 -6066318 + MER113 DNA MER1_type? 133 191 -330 366 156 0 0 chr20 60601968 60602032 -6065973 + CT-rich Low_complexity Low_complexity 4 67 0 2089 128 14 0 chr20 60602049 60602346 -6065659 - AluSx SINE Alu -11 301 1 1081 159 0 0 chr20 60602357 60602514 -6065491 - AluJb SINE Alu -19 293 137 936 154 39 48 chr20 60602645 60602853 -6065152 + MER20 DNA MER1_type 14 219 0 320 326 45 41 chr20 60602882 60603103 -6064902 + L2 LINE L2 2819 3040 -232 244 136 11 45 chr20 60603905 60603993 -6064012 + (TA)n Simple_repeat Simple_repeat 2 86 0 2273 114 3 0 chr20 60604009 60604317 -6063688 - AluSx SINE Alu -3 309 1 698 125 36 0 chr20 60604911 60605163 -6062842 - FLAM_C SINE Alu 0 256 1 2277 117 0 7 chr20 60605730 60606039 -6061966 - AluSx SINE Alu -5 307 1 281 270 135 0 chr20 60606386 60606475 -6061530 + L2 LINE L2 3212 3312 -1 540 304 89 41 chr20 60607686 60607772 -6060233 + L1ME LINE L1 4309 4389 -1757 2286 108 7 0 chr20 60607772 60608068 -6059937 + AluSx SINE Alu 1 298 -14 540 304 89 41 chr20 60608068 60608666 -6059339 + L1ME LINE L1 4389 5026 -1120 2001 138 7 7 chr20 60608809 60609100 -6058905 + AluSx SINE Alu 1 291 -21 180 0 0 0 chr20 60609100 60609120 -6058885 + (TA)n Simple_repeat Simple_repeat 2 21 0 919 272 127 21 chr20 60609134 60609570 -6058435 + L1ME LINE L1 5295 5751 -370 2735 35 0 0 chr20 60609962 60610273 -6057732 - AluY SINE Alu 0 311 1 304 309 44 82 chr20 60611434 60611822 -6056183 + L1 LINE L1 2170 2542 -3604 23 86 0 0 chr20 60612213 60612271 -6055734 + AT_rich Low_complexity Low_complexity 1 58 0 345 339 83 29 chr20 60612280 60612593 -6055412 + L1 LINE L1 3116 3445 -2701 21 57 0 0 chr20 60612682 60612717 -6055288 + AT_rich Low_complexity Low_complexity 1 35 0 336 229 124 26 chr20 60612834 60612987 -6055018 + L1 LINE L1 3771 3938 -2208 22 23 0 45 chr20 60613026 60613050 -6054955 + AT_rich Low_complexity Low_complexity 1 24 -18 2147 137 0 0 chr20 60613050 60613356 -6054649 - AluSx SINE Alu -6 306 1 22 23 0 45 chr20 60613356 60613375 -6054630 + AT_rich Low_complexity Low_complexity 24 42 0 2041 125 0 14 chr20 60613378 60613696 -6054309 + AluJb SINE Alu 1 314 0 367 254 65 14 chr20 60614276 60614414 -6053591 + MER69 DNA AcHobo 3 147 -1079 2382 96 3 3 chr20 60614529 60614841 -6053164 + AluSq SINE Alu 1 312 -1 3039 84 10 2 chr20 60614883 60615299 -6052706 + L1PA8 LINE L1 5754 6172 0 2128 131 0 0 chr20 60615543 60615841 -6052164 - AluSx SINE Alu -14 298 1 1951 118 33 0 chr20 60615918 60616189 -6051816 + AluSg SINE Alu 16 295 -15 466 294 32 27 chr20 60616742 60616929 -6051076 + MIR SINE MIR 3 190 -72 252 149 85 0 chr20 60616995 60617042 -6050963 + MIR SINE MIR 119 169 -93 324 322 23 23 chr20 60617384 60617598 -6050407 + L1ME4a LINE L1 5684 5897 -224 325 181 96 32 chr20 60617792 60617886 -6050119 - L1ME3 LINE L1 0 6162 6071 406 184 12 35 chr20 60617928 60618044 -6049961 - L1ME3 LINE L1 -19 6145 6041 2332 86 3 7 chr20 60620023 60620326 -6047679 - AluSx SINE Alu -10 302 1 23 0 0 0 chr20 60620825 60620848 -6047157 + AT_rich Low_complexity Low_complexity 1 23 0 365 263 61 31 chr20 60621388 60621646 -6046359 + L1ME LINE L1 1304 1515 -4908 310 276 0 0 chr20 60621671 60621755 -6046250 - L1M4 LINE L1 -1998 4148 4065 245 246 0 0 chr20 60621781 60621838 -6046167 + L1ME3 LINE L1 6104 6160 -2 189 0 0 0 chr20 60622652 60622673 -6045332 + (T)n Simple_repeat Simple_repeat 1 21 0 1530 215 44 0 chr20 60622916 60623232 -6044773 + MER58B DNA MER1_type 4 333 -8 2188 181 43 18 chr20 60623235 60623682 -6044323 + MLT1C LTR MaLR 1 365 -9 23 0 0 0 chr20 60624004 60624027 -6043978 + AT_rich Low_complexity Low_complexity 1 23 0 272 288 56 32 chr20 60624957 60625082 -6042923 + L2 LINE L2 3143 3270 -2 983 151 5 16 chr20 60625253 60625438 -6042567 + MER96B DNA MER1_type? 37 219 -198 2372 93 0 0 chr20 60625442 60625743 -6042262 - AluSg SINE Alu -9 301 1 254 286 60 12 chr20 60625775 60625859 -6042146 + MLT1K LTR MaLR 311 398 -190 836 292 37 25 chr20 60626157 60626479 -6041526 - MLT1K LTR MaLR -5 583 258 * 913 151 9 101 chr20 60626464 60626573 -6041432 - MER96B DNA MER1_type? -214 203 122 2371 97 0 3 chr20 60626573 60626873 -6041132 + AluSx SINE Alu 1 299 -13 913 151 9 101 chr20 60626873 60626982 -6041023 - MER96B DNA MER1_type? -295 122 5 1494 226 66 42 chr20 60627053 60627509 -6040496 + MLT1C LTR MaLR 1 467 0 221 204 41 0 chr20 60628255 60628304 -6039701 + L2 LINE L2 3221 3271 -1 295 329 58 58 chr20 60630571 60630863 -6037142 - L2 LINE L2 -96 3217 2926 287 151 0 38 chr20 60631085 60631138 -6036867 - FRAM/FAM SINE Alu -124 51 1 1657 145 14 35 chr20 60631418 60631753 -6036252 - AluJo SINE Alu 0 329 1 334 324 21 14 chr20 60632212 60632354 -6035651 - LTR67 LTR ERVL 0 557 415 679 154 23 29 chr20 60632692 60632867 -6035138 + GA-rich Low_complexity Low_complexity 4 177 0 242 213 0 27 chr20 60632854 60632929 -6035076 + G-rich Low_complexity Low_complexity 1 73 0 * 2366 78 0 0 chr20 60634054 60634348 -6033657 - AluSg SINE Alu -16 294 1 1842 163 0 7 chr20 60634565 60634859 -6033146 - AluSx SINE Alu -20 292 1 2344 116 0 0 chr20 60635235 60635545 -6032460 - AluSx SINE Alu -2 310 1 498 304 63 33 chr20 60635550 60635796 -6032209 + L1ME4a LINE L1 5557 5815 -306 3991 178 17 11 chr20 60635796 60636544 -6031461 + L1MB5 LINE L1 5413 6165 -9 498 304 63 33 chr20 60636544 60636600 -6031405 + L1ME4a LINE L1 5815 5868 -253 2456 18 4 0 chr20 60636631 60636903 -6031102 + L1PA4 LINE L1 5880 6152 -3 303 258 14 74 chr20 60636970 60637187 -6030818 + L1ME4a LINE L1 5917 6120 -1 207 271 0 0 chr20 60638023 60638071 -6029934 - L2 LINE L2 0 3313 3266 436 308 64 23 chr20 60638299 60638471 -6029534 - MIR SINE MIR -1 261 83 670 229 35 30 chr20 60639199 60639400 -6028605 - MER113 DNA MER1_type? -319 202 1 29 28 0 0 chr20 60639422 60639458 -6028547 + AT_rich Low_complexity Low_complexity 1 36 0 1006 164 6 6 chr20 60639720 60639885 -6028120 + AluJb SINE Alu 137 301 -11 358 99 12 148 chr20 60639938 60640019 -6027986 + AluJ/FRAM SINE Alu 220 289 -13 2257 98 0 3 chr20 60640029 60640315 -6027690 + AluSc SINE Alu 13 297 -12 1190 214 14 0 chr20 60641973 60642193 -6025812 + MER58A DNA MER1_type 2 224 0 198 333 0 0 chr20 60643323 60643377 -6024628 + MIR SINE MIR 83 136 -72 345 328 111 55 chr20 60643505 60643565 -6024440 - L3 LINE CR1 -742 835 780 2335 116 0 0 chr20 60643565 60643875 -6024130 - AluSx SINE Alu -2 310 1 345 328 111 55 chr20 60643875 60644085 -6023920 - L3 LINE CR1 -797 780 550 3074 166 68 0 chr20 60645010 60645553 -6022452 - L1MB5 LINE L1 -8 6166 5587 650 168 63 0 chr20 60645562 60645705 -6022300 - L1MB5 LINE L1 -816 5330 5179 618 269 44 9 chr20 60645737 60645955 -6022050 - L1ME1 LINE L1 -5 6161 5931 1963 156 0 0 chr20 60646359 60646661 -6021344 + AluJb SINE Alu 1 302 -10 224 372 66 8 chr20 60647173 60647294 -6020711 + L2 LINE L2 3121 3248 -24 262 264 66 0 chr20 60647538 60647629 -6020376 + L1MC4 LINE L1 7634 7730 -312 1168 192 78 26 chr20 60647702 60648001 -6020004 + L1MC4 LINE L1 7665 8040 -2 613 134 113 0 chr20 60648451 60648548 -6019457 + FLAM_C SINE Alu 2 109 -34 599 290 79 9 chr20 60648693 60648907 -6019098 - MIR SINE MIR 0 262 34 238 313 0 0 chr20 60648923 60648987 -6019018 + MIR SINE MIR 199 262 0 569 197 120 16 chr20 60649044 60649290 -6018715 + MER33 DNA MER1_type 1 326 -37 250 346 155 32 chr20 60649969 60650504 -6017501 + L2 LINE L2 2303 2903 -411 249 263 0 0 chr20 60650752 60650809 -6017196 + L2 LINE L2 3256 3312 -1 207 0 0 0 chr20 60651044 60651067 -6016938 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2384 97 3 0 chr20 60651201 60651512 -6016493 - AluSx SINE Alu 0 312 1 22 35 0 0 chr20 60652356 60652385 -6015620 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr20 60653086 60653107 -6014898 + AT_rich Low_complexity Low_complexity 1 21 0 6762 124 26 9 chr20 60653108 60654123 -6013882 - L1MC1 LINE L1 -5 6328 5294 2280 100 7 0 chr20 60654123 60654432 -6013573 - AluSq SINE Alu -2 311 1 6762 124 26 9 chr20 60654432 60654464 -6013541 - L1MC1 LINE L1 -1039 5294 5264 1651 169 7 3 chr20 60654475 60654765 -6013240 - L1MA7 LINE L1 0 6291 6001 5047 104 6 13 chr20 60654765 60655424 -6012581 - L1PA13 LINE L1 -8 6155 5498 2297 109 7 0 chr20 60655424 60655728 -6012277 - AluSx SINE Alu -6 306 1 5047 104 6 13 chr20 60655728 60655757 -6012248 - L1PA13 LINE L1 -665 5498 5470 1229 172 13 0 chr20 60655762 60655989 -6012016 - L1 LINE L1 -1752 5813 5584 230 133 13 107 chr20 60655956 60656031 -6011974 - L1MCa LINE L1 -4135 3430 3363 * 1057 186 21 81 chr20 60656050 60656383 -6011622 - L1MC1 LINE L1 -870 5276 4964 4540 131 11 42 chr20 60656385 60657187 -6010818 - L1MCa LINE L1 -5076 2489 1713 3131 144 76 9 chr20 60657218 60657782 -6010223 - L1MCa LINE L1 -5783 1782 1181 647 272 43 0 chr20 60657937 60658121 -6009884 + MIR SINE MIR 33 224 -38 357 247 159 53 chr20 60658195 60658365 -6009640 - L2 LINE L2 -189 3083 2896 362 341 52 12 chr20 60658379 60658552 -6009453 - L2 LINE L2 -8 3305 3126 381 225 72 63 chr20 60658786 60659008 -6008997 + MER113 DNA MER1_type? 1 224 -297 249 254 102 17 chr20 60659713 60659831 -6008174 - LTR68 LTR ERV1 -606 134 7 261 273 26 0 chr20 60659963 60660040 -6007965 - MIR SINE MIR -68 140 62 795 223 30 0 chr20 60660052 60660218 -6007787 + MER20 DNA MER1_type 1 171 -48 241 333 78 31 chr20 60661611 60661803 -6006202 + L2 LINE L2 2812 3012 -260 483 261 131 77 chr20 60661806 60662196 -6005809 - MLT1J LTR MaLR -1 510 100 254 270 0 14 chr20 60662345 60662419 -6005586 - L1MC4a LINE L1 -1889 5919 5847 * 1032 236 48 29 chr20 60662414 60662506 -6005499 - L1MC4a LINE L1 -589 5575 5486 2129 125 0 3 chr20 60662506 60662811 -6005194 - AluSx SINE Alu -8 304 1 1032 236 48 29 chr20 60662811 60663159 -6004846 - L1MC4a LINE L1 -678 5486 5123 1822 225 60 5 chr20 60663188 60663624 -6004381 - MLT1C LTR MaLR 0 467 8 311 276 51 0 chr20 60663815 60663913 -6004092 - MLT1L LTR MaLR -20 595 493 508 320 51 27 chr20 60664953 60665211 -6002794 - MIR SINE MIR 0 262 2 226 295 72 30 chr20 60665307 60665473 -6002532 + L1PA8A LINE L1 5653 5825 -306 * 903 256 50 4 chr20 60665355 60665617 -6002388 + L1MC4a LINE L1 5705 5978 -1830 302 219 58 0 chr20 60665632 60665787 -6002218 + (TA)n Simple_repeat Simple_repeat 1 164 0 239 304 98 73 chr20 60665847 60666370 -6001635 + L1MC4a LINE L1 6054 6589 -1219 1631 217 92 136 chr20 60666478 60666986 -6001019 + L1MC5 LINE L1 6625 7154 -807 1817 142 0 85 chr20 60666986 60667317 -6000688 + AluJb SINE Alu 1 303 -9 1631 217 92 136 chr20 60667317 60667998 -6000007 + L1MC5 LINE L1 7154 7761 -200 349 163 8 10 chr20 60669582 60669834 -5998171 + AluJo SINE Alu 10 302 0 431 259 93 21 chr20 60669968 60670133 -5997872 + L1MC5 LINE L1 7745 8038 -4 28 0 0 0 chr20 60670137 60670165 -5997840 + AT_rich Low_complexity Low_complexity 1 28 0 257 299 191 13 chr20 60670435 60670592 -5997413 + MIR SINE MIR 19 203 -59 1104 214 39 96 chr20 60670621 60671028 -5996977 + MLT1B LTR MaLR 1 384 -6 455 310 29 0 chr20 60671286 60671460 -5996545 + (CA)n Simple_repeat Simple_repeat 2 180 0 494 293 29 0 chr20 60671479 60671653 -5996352 + (CA)n Simple_repeat Simple_repeat 1 179 0 273 296 17 45 chr20 60671608 60671784 -5996221 + (CATATA)n Simple_repeat Simple_repeat 6 176 0 * 195 147 0 73 chr20 60671805 60671873 -5996132 + (CATA)n Simple_repeat Simple_repeat 4 66 0 281 176 78 0 chr20 60675527 60675578 -5992427 + MLT1K LTR MaLR 532 586 -2 1712 185 98 83 chr20 60676305 60676846 -5991159 + MLT1H LTR MaLR 1 549 0 226 269 34 67 chr20 60677358 60677477 -5990528 - MIR3 SINE MIR -7 201 87 685 323 57 8 chr20 60677500 60677748 -5990257 + MIR SINE MIR 3 262 0 286 332 18 10 chr20 60677987 60678106 -5989899 - MIR SINE MIR -64 144 38 628 309 72 38 chr20 60679831 60680277 -5987728 + MLT1L LTR MaLR 132 592 -23 283 248 233 31 chr20 60680315 60680444 -5987561 + MER5A DNA MER1_type 29 183 -6 199 274 164 0 chr20 60681300 60681373 -5986632 + MER5A DNA MER1_type 4 88 -101 1133 317 113 18 chr20 60681412 60682698 -5985307 + L2 LINE L2 1681 3259 -54 316 284 97 13 chr20 60683152 60683307 -5984698 - L1ME2 LINE L1 0 6164 5997 401 234 45 9 chr20 60683321 60683432 -5984573 - L2 LINE L2 -247 3066 2952 2366 85 0 19 chr20 60683670 60683986 -5984019 - AluSx SINE Alu -2 310 1 357 279 36 0 chr20 60683986 60684097 -5983908 - L1MD3 LINE L1 -17 7978 7864 209 159 23 0 chr20 60684127 60684171 -5983834 + (TG)n Simple_repeat Simple_repeat 2 46 0 965 216 134 57 chr20 60684171 60684267 -5983738 - L1MD2 LINE L1 -199 6160 6073 2198 94 14 0 chr20 60684267 60684567 -5983438 + AluSx SINE Alu 1 304 0 965 216 134 57 chr20 60684567 60684857 -5983148 - L1MD2 LINE L1 -286 6073 5743 330 301 154 0 chr20 60684969 60685105 -5982900 + MIR SINE MIR 106 262 0 407 285 125 5 chr20 60685746 60685946 -5982059 + MIR SINE MIR 28 251 -11 283 298 80 65 chr20 60686836 60687326 -5980679 - L1ME4a LINE L1 -1 6120 5624 443 292 104 25 chr20 60687331 60687605 -5980400 - L1ME4a LINE L1 -709 5462 5296 196 364 13 0 chr20 60688622 60688699 -5979306 - MIR3 SINE MIR -32 176 99 343 218 103 0 chr20 60689259 60689346 -5978659 + L2 LINE L2 3175 3270 -2 694 267 19 6 chr20 60689674 60689835 -5978170 + MIR SINE MIR 25 187 -75 274 326 61 0 chr20 60689964 60690062 -5977943 - MIR SINE MIR -74 188 85 681 200 13 39 chr20 60690072 60690227 -5977778 - MLT1E2 LTR MaLR -10 616 466 841 191 30 60 chr20 60690227 60690372 -5977633 + AluJo SINE Alu 1 140 -172 2485 80 0 0 chr20 60690372 60690674 -5977331 + AluY SINE Alu 1 302 -9 841 191 30 60 chr20 60690674 60690727 -5977278 + AluJo SINE Alu 140 193 -119 356 105 105 0 chr20 60690727 60690784 -5977221 + MADE1 DNA Mariner 18 80 0 887 134 0 0 chr20 60690784 60690903 -5977102 + AluJo SINE Alu 171 289 -23 1320 212 27 56 chr20 60690903 60691313 -5976692 - MLT1E2 LTR MaLR -153 473 76 413 299 13 7 chr20 60691196 60691350 -5976655 - MLT2C1 LTR ERVL -199 198 44 * 1330 273 80 18 chr20 60691660 60692111 -5975894 + MLT1J LTR MaLR 3 481 -30 884 287 127 19 chr20 60693433 60693802 -5974203 + MLT1I LTR MaLR 1 409 0 866 195 83 5 chr20 60694017 60694222 -5973783 - L1MD2 LINE L1 -396 5963 5743 22 0 0 0 chr20 60694282 60694304 -5973701 + AT_rich Low_complexity Low_complexity 1 22 0 2315 197 27 20 chr20 60694502 60695090 -5972915 + HsTC2 DNA Tc2 1307 1898 0 940 177 64 35 chr20 60695420 60695440 -5972565 - L1M3 LINE L1 -576 5607 5589 607 180 9 0 chr20 60695440 60695551 -5972454 - L1MD2 LINE L1 -17 6342 6231 940 177 64 35 chr20 60695551 60695824 -5972181 - L1M3 LINE L1 -594 5589 5325 2224 124 10 0 chr20 60695824 60696122 -5971883 - AluSx SINE Alu -11 301 1 940 177 64 35 chr20 60696122 60696650 -5971355 - L1M3 LINE L1 -858 5325 4640 21 57 0 0 chr20 60696749 60696784 -5971221 + AT_rich Low_complexity Low_complexity 1 35 0 317 288 53 6 chr20 60697401 60697655 -5970350 - MER113 DNA MER1_type? -1 520 215 266 238 10 109 chr20 60697767 60697817 -5970188 + L2 LINE L2 3136 3173 -99 1890 151 3 13 chr20 60697817 60698121 -5969884 - AluJo SINE Alu -11 301 1 266 238 10 109 chr20 60698121 60698171 -5969834 + L2 LINE L2 3173 3226 -46 882 209 33 24 chr20 60699270 60699480 -5968525 - MER20 DNA MER1_type -2 217 6 647 184 29 0 chr20 60700283 60700419 -5967586 + MER103 DNA DNA 20 159 -7 2789 26 3 0 chr20 60703322 60703632 -5964373 + AluY SINE Alu 1 311 0 201 378 8 34 chr20 60704268 60704387 -5963618 - MIR SINE MIR -28 234 119 200 121 30 0 chr20 60705094 60705127 -5962878 + CT-rich Low_complexity Low_complexity 1 34 0 786 163 78 12 chr20 60705292 60705458 -5962547 + MER53 DNA DNA 1 177 -12 297 336 75 0 chr20 60706395 60706502 -5961503 - MIR SINE MIR -92 170 56 282 311 9 28 chr20 60706891 60706997 -5961008 + MIR SINE MIR 65 168 -94 195 279 65 104 chr20 60707625 60707962 -5960043 - L2 LINE L2 -353 2961 2638 244 318 166 44 chr20 60709560 60710013 -5957992 + L2 LINE L2 2804 3311 -2 1645 226 43 28 chr20 60710986 60711173 -5956832 - L1MA10 LINE L1 -38 6296 6113 2015 122 24 7 chr20 60711173 60711488 -5956517 + AluSx SINE Alu 1 312 0 1645 226 43 28 chr20 60711488 60711764 -5956241 - L1MA10 LINE L1 -221 6113 5826 2187 96 110 3 chr20 60711852 60712206 -5955799 - L1MA3 LINE L1 0 6305 5914 944 230 12 8 chr20 60713671 60713919 -5954086 - L1MD3 LINE L1 -1 7994 7746 259 271 59 0 chr20 60714877 60714962 -5953043 - L2 LINE L2 -6 3266 3177 938 118 25 19 chr20 60716028 60716189 -5951816 - L1MB7 LINE L1 -18 6166 6005 2157 114 0 3 chr20 60716195 60716484 -5951521 - AluSx SINE Alu -7 305 18 5222 162 35 24 chr20 60716490 60717937 -5950068 - L1PA16 LINE L1 -317 5849 4391 342 0 0 0 chr20 60717937 60717975 -5950030 + (TG)n Simple_repeat Simple_repeat 2 39 0 5222 162 35 24 chr20 60717975 60718263 -5949742 - L1PA16 LINE L1 -1775 4391 4107 301 167 12 24 chr20 60718267 60718351 -5949654 + MER96B DNA MER1_type? 97 179 -238 502 302 99 11 chr20 60720315 60720497 -5947508 - MIR SINE MIR -57 205 8 2106 142 7 7 chr20 60720664 60720974 -5947031 - AluSx SINE Alu -2 310 1 316 172 52 90 chr20 60720976 60721110 -5946895 - MER113 DNA MER1_type? -303 218 90 354 264 48 16 chr20 60721136 60721261 -5946744 - MER113 DNA MER1_type? 0 521 393 5060 213 39 74 chr20 60721274 60722693 -5945312 - L1MD2 LINE L1 -1 6358 4891 899 86 0 0 chr20 60722693 60722810 -5945195 + AluSg/x SINE Alu 180 296 -16 5060 213 39 74 chr20 60722810 60724406 -5943599 - L1MD2 LINE L1 -1468 4891 3222 1025 111 0 0 chr20 60724406 60724541 -5943464 + AluSq/x SINE Alu 1 135 -178 1925 138 3 0 chr20 60724541 60724832 -5943173 + AluSx SINE Alu 1 292 -20 1329 247 33 39 chr20 60724833 60725073 -5942932 - L1MD2 LINE L1 -2915 3231 2991 682 94 0 0 chr20 60725073 60725169 -5942836 - L1MA2 LINE L1 -5 6299 6204 1329 247 33 39 chr20 60725169 60725492 -5942513 - L1MD2 LINE L1 -3155 2991 2712 274 279 27 27 chr20 60725497 60725608 -5942397 - LTR41 LTR ERVL -6 767 657 583 247 18 24 chr20 60726150 60726316 -5941689 - LTR41 LTR ERVL -608 165 1 397 301 116 0 chr20 60726689 60726835 -5941170 - ERVL LTR ERVL -386 5378 5216 * 1746 309 44 48 chr20 60726806 60727987 -5940018 - ERVL LTR ERVL -3770 1994 819 691 339 32 17 chr20 60728032 60728377 -5939628 - ERVL LTR ERVL -5063 701 352 262 283 228 55 chr20 60728694 60728913 -5939092 - LTR41 LTR ERVL -7 766 510 1177 114 105 9 chr20 60729273 60729483 -5938522 - L1MDa LINE L1 -4183 2357 2128 885 147 10 76 chr20 60729483 60729680 -5938325 + AluJb SINE Alu 129 312 0 4918 193 87 34 chr20 60729707 60730999 -5937006 - L1MDa LINE L1 -4413 2127 768 1773 210 48 13 chr20 60731008 60731403 -5936602 + L1ME1 LINE L1 5758 6166 0 318 162 27 81 chr20 60732173 60732247 -5935758 - MIR SINE MIR -101 161 92 410 221 0 126 chr20 60732313 60732440 -5935565 + L2 LINE L2 2893 3003 -310 291 204 0 0 chr20 60732444 60732493 -5935512 + MER81 DNA DNA 59 107 -7 893 259 177 0 chr20 60732595 60732877 -5935128 - MLT1H LTR MaLR -206 343 12 398 182 0 0 chr20 60733388 60733454 -5934551 - L2 LINE L2 0 3313 3248 434 282 163 10 chr20 60733657 60733859 -5934146 - MIR SINE MIR -17 245 13 1071 198 63 119 chr20 60734313 60734802 -5933203 - MLT1C LTR MaLR 0 467 6 1268 161 14 5 chr20 60735010 60735248 -5932757 - AluJo SINE Alu 0 302 63 7443 53 12 1 chr20 60735273 60736903 -5931102 - L1PA8 LINE L1 0 6172 4439 351 248 99 37 chr20 60737284 60737413 -5930592 - MIR SINE MIR -38 170 42 308 292 99 16 chr20 60737923 60738115 -5929890 - LTR33 LTR ERVL -11 510 303 2918 189 78 23 chr20 60738649 60739304 -5928701 - L1MC2 LINE L1 -8 6336 5646 414 169 60 0 chr20 60739352 60739435 -5928570 - L1MB3 LINE L1 -7 6176 6089 808 215 75 5 chr20 60741018 60741204 -5926801 + LTR16C LTR ERVL 262 460 -31 238 304 0 13 chr20 60741352 60741431 -5926574 - MIR SINE MIR -6 256 179 851 273 21 38 chr20 60741824 60742113 -5925892 + MER63B DNA MER1_type 1 284 -152 1731 178 17 36 chr20 60742118 60742478 -5925527 + MLT1A1 LTR MaLR 1 353 -12 4129 181 30 36 chr20 60742550 60743422 -5924583 - L1MB5 LINE L1 -2 6172 5306 1163 102 0 0 chr20 60743422 60743610 -5924395 + AluSg/x SINE Alu 124 311 0 1030 168 72 55 chr20 60743614 60743821 -5924184 - L1MB5 LINE L1 -841 5305 5090 2219 112 0 0 chr20 60743821 60744133 -5923872 + AluSx SINE Alu 1 312 0 1030 168 72 55 chr20 60744133 60744216 -5923789 - L1MB5 LINE L1 -1056 5090 5010 655 175 31 9 chr20 60744222 60744378 -5923627 + MER63 DNA MER1_type 889 1042 -20 2066 97 6 25 chr20 60744414 60744733 -5923272 - AluSq SINE Alu 0 313 1 637 164 36 183 chr20 60745129 60745348 -5922657 - MER53 DNA DNA -2 187 1 238 240 190 0 chr20 60745391 60745491 -5922514 - MIR3 SINE MIR -4 204 86 206 237 79 26 chr20 60745537 60745613 -5922392 - L2 LINE L2 -1 3271 3192 334 224 209 15 chr20 60745632 60745766 -5922239 + MIR SINE MIR 6 165 -97 23 78 0 0 chr20 60747069 60747120 -5920885 + GC_rich Low_complexity Low_complexity 1 51 0 520 240 33 13 chr20 60751229 60751379 -5916626 - L1ME4a LINE L1 -5 6099 5947 1876 110 3 36 chr20 60751703 60752004 -5916001 - AluSx SINE Alu -15 297 7 598 246 128 28 chr20 60752169 60752380 -5915625 - MIR SINE MIR -6 256 25 841 237 24 87 chr20 60753178 60753465 -5914540 + MER102b DNA MER1_type 67 335 -6 248 264 0 55 chr20 60753738 60753829 -5914176 + L2 LINE L2 2921 3006 -307 226 156 22 44 chr20 60753864 60753909 -5914096 - MLT1D LTR MaLR -461 44 1 585 170 0 0 chr20 60753946 60754058 -5913947 + (TCTA)n Simple_repeat Simple_repeat 3 114 0 364 269 49 88 chr20 60754337 60754691 -5913314 - L1ME4a LINE L1 -200 5945 5178 936 279 99 30 chr20 60754701 60755364 -5912641 - L1ME4a LINE L1 -4579 1731 1023 3573 227 28 23 chr20 60755387 60756688 -5911317 - L1ME1 LINE L1 -5 6230 4825 797 245 21 0 chr20 60756692 60756884 -5911121 + L1M4 LINE L1 4726 4921 -1225 626 265 63 0 chr20 60756882 60757071 -5910934 - L1ME1 LINE L1 -6152 244 44 * 202 290 58 14 chr20 60757073 60757142 -5910863 + L2 LINE L2 2606 2677 -637 414 264 115 64 chr20 60757156 60757486 -5910519 - L1ME4a LINE L1 -5187 932 586 316 224 9 84 chr20 60757495 60757602 -5910403 - L1ME4a LINE L1 -5699 420 322 308 252 151 83 chr20 60757942 60758160 -5909845 - L1M4 LINE L1 -940 5206 4974 899 169 7 0 chr20 60758249 60758403 -5909602 - FAM SINE Alu -30 155 1 473 259 69 0 chr20 60758404 60758535 -5909470 + MER58C DNA MER1_type 76 215 0 253 253 40 63 chr20 60760790 60760964 -5907041 - Charlie7 DNA MER1_type -16 2596 2427 * 313 240 73 21 chr20 60760942 60761038 -5906967 - Charlie7 DNA MER1_type -2506 106 6 306 226 108 21 chr20 60761126 60761219 -5906786 - Charlie7 DNA MER1_type -2506 106 6 1040 190 31 5 chr20 60761309 60761504 -5906501 - MER3 DNA MER1_type -4 205 6 367 298 101 11 chr20 60761553 60761731 -5906274 - MIR SINE MIR -6 256 63 214 291 18 0 chr20 60762552 60762607 -5905398 + MIR SINE MIR 79 134 -74 681 240 180 61 chr20 60764523 60764968 -5903037 - MLT1D LTR MaLR 0 505 8 1848 19 0 0 chr20 60765779 60765992 -5902013 + AluYb8 SINE Alu 106 318 0 264 137 0 0 chr20 60766702 60766753 -5901252 + (TG)n Simple_repeat Simple_repeat 2 52 0 26 0 0 0 chr20 60767108 60767134 -5900871 + AT_rich Low_complexity Low_complexity 1 26 0 222 196 22 22 chr20 60768450 60768496 -5899509 + L2 LINE L2 3225 3270 -2 293 218 26 13 chr20 60770173 60770251 -5897754 + U6 snRNA snRNA 1 79 -28 342 278 37 19 chr20 60770454 60770562 -5897443 - MIR SINE MIR -72 190 81 1049 308 42 16 chr20 60770590 60771042 -5896963 + MER113 DNA MER1_type? 9 472 -49 611 77 0 0 chr20 60771357 60771435 -5896570 - AluSg/x SINE Alu -29 281 204 297 0 0 0 chr20 60772085 60772118 -5895887 + (TG)n Simple_repeat Simple_repeat 2 34 0 273 300 106 26 chr20 60772261 60772488 -5895517 - L1ME LINE L1 -396 5774 5530 183 42 0 0 chr20 60772692 60772716 -5895289 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 324 285 99 47 chr20 60773300 60773472 -5894533 - MLT1K LTR MaLR 0 588 408 22 0 0 0 chr20 60773518 60773540 -5894465 + AT_rich Low_complexity Low_complexity 1 22 0 263 309 105 47 chr20 60773543 60773694 -5894311 - MLT1K LTR MaLR -327 261 95 1936 124 0 0 chr20 60773694 60773959 -5894046 + AluSx SINE Alu 42 306 -6 263 309 105 47 chr20 60773959 60773998 -5894007 - MLT1K LTR MaLR -493 95 60 263 223 72 93 chr20 60774242 60774381 -5893624 - L2 LINE L2 -21 3251 3116 672 258 119 8 chr20 60775385 60775629 -5892376 - MER113 DNA MER1_type? -43 478 208 206 219 183 24 chr20 60775792 60775874 -5892131 + MIR SINE MIR 51 145 -117 186 43 0 0 chr20 60777143 60777166 -5890839 + (GGCTG)n Simple_repeat Simple_repeat 4 26 0 23 33 0 0 chr20 60777333 60777363 -5890642 + GC_rich Low_complexity Low_complexity 1 30 0 354 354 14 0 chr20 60778436 60778580 -5889425 + MIR SINE MIR 13 158 -104 234 250 49 90 chr20 60778679 60778823 -5889182 - Charlie8 DNA MER1_type -2278 139 2 594 258 110 19 chr20 60780741 60780950 -5887055 - MLT1K LTR MaLR -17 571 344 248 197 0 76 chr20 60781265 60781331 -5886674 + LTR16A1 LTR ERVL 2 62 -395 322 262 12 0 chr20 60781335 60781419 -5886586 + LTR16A1 LTR ERVL 333 417 -40 258 263 131 10 chr20 60782767 60782866 -5885139 - MIR SINE MIR -120 142 32 492 263 112 64 chr20 60783073 60783324 -5884681 - MLT1H LTR MaLR 0 549 280 3768 138 23 5 chr20 60783610 60784253 -5883752 - L1MA4 LINE L1 -13 6287 5633 858 222 9 50 chr20 60784253 60784474 -5883531 - MLT1H LTR MaLR -337 212 1 248 314 86 68 chr20 60784529 60784866 -5883139 - MLT1L LTR MaLR -59 543 110 291 258 0 0 chr20 60784964 60785053 -5882952 - MER113 DNA MER1_type? -337 184 96 560 194 31 23 chr20 60785085 60785214 -5882791 - MER58A DNA MER1_type -5 219 90 1211 146 0 44 chr20 60785214 60785443 -5882562 + AluSq SINE Alu 103 313 0 262 88 0 0 chr20 60785443 60785477 -5882528 - MER58A DNA MER1_type -18 89 56 466 271 0 0 chr20 60785478 60785574 -5882431 - MER58A DNA MER1_type -11 96 1 1331 275 45 38 chr20 60785761 60786233 -5881772 - MLT1J LTR MaLR -36 475 1 204 296 96 56 chr20 60787582 60787707 -5880298 - L2 LINE L2 0 3313 3184 487 290 82 17 chr20 60787778 60787917 -5880088 - MIR SINE MIR 0 262 133 450 0 0 0 chr20 60787917 60787967 -5880038 + (CA)n Simple_repeat Simple_repeat 1 50 0 198 91 0 0 chr20 60787968 60788001 -5880004 + (CAGAGA)n Simple_repeat Simple_repeat 2 34 0 487 290 82 17 chr20 60788001 60788090 -5879915 - MIR SINE MIR -128 134 17 435 256 34 0 chr20 60789247 60789364 -5878641 + MER45A DNA AcHobo 58 178 0 2318 201 54 15 chr20 60789684 60790205 -5877800 - L1MC3 LINE L1 0 7785 7245 419 146 0 12 chr20 60791369 60791451 -5876554 - AluJb SINE Alu -2 310 230 * 772 143 58 65 chr20 60791445 60791599 -5876406 - AluJb SINE Alu -149 163 11 2044 92 48 0 chr20 60792277 60792549 -5875456 - AluSx SINE Alu -20 292 8 689 186 138 6 chr20 60792842 60793009 -5874996 + MER53 DNA DNA 1 189 0 2427 68 17 0 chr20 60794472 60794767 -5873238 - AluSx SINE Alu -12 300 1 2513 25 0 3 chr20 60795442 60795754 -5872251 + AluY SINE Alu 1 311 0 304 299 96 41 chr20 60799569 60799860 -5868145 - L1MC4a LINE L1 -1814 5994 5688 457 294 133 32 chr20 60800081 60800390 -5867615 + MER102b DNA MER1_type 2 341 0 599 190 108 13 chr20 60800399 60800557 -5867448 - MER20 DNA MER1_type -1 218 46 242 284 54 101 chr20 60802257 60802405 -5865600 + L2 LINE L2 3117 3257 -15 268 338 35 14 chr20 60803719 60803864 -5864141 + L2 LINE L2 2530 2677 -637 239 350 102 12 chr20 60803896 60804150 -5863855 + L2 LINE L2 2804 3080 -233 226 388 8 0 chr20 60804378 60804507 -5863498 + L2 LINE L2 3143 3272 0 428 347 44 13 chr20 60804708 60804933 -5863072 + HAL1 LINE L1 3 234 -2273 2344 251 89 40 chr20 60804962 60805889 -5862116 + HAL1 LINE L1 320 1292 -1215 901 184 74 9 chr20 60805866 60806083 -5861922 + L1MA8 LINE L1 6019 6249 -42 * 1557 261 188 48 chr20 60806085 60807178 -5860827 + HAL1 LINE L1 1263 2507 0 211 266 75 53 chr20 60811447 60811541 -5856464 + MIR3 SINE MIR 79 174 -34 359 196 0 65 chr20 60814681 60814788 -5853217 + MER113 DNA MER1_type? 8 107 -414 226 182 61 61 chr20 60814902 60814968 -5853037 + MER113 DNA MER1_type? 453 518 -3 426 39 0 0 chr20 60815909 60815961 -5852044 + (CA)n Simple_repeat Simple_repeat 2 53 0 273 321 46 0 chr20 60816068 60816177 -5851828 + L2 LINE L2 3159 3272 0 1650 94 0 5 chr20 60816250 60816462 -5851543 - AluSx SINE Alu -5 305 95 338 215 0 65 chr20 60816722 60816829 -5851176 + MER113 DNA MER1_type? 8 107 -414 678 119 0 20 chr20 60817219 60817320 -5850685 - AluSx SINE Alu -212 100 2 211 235 137 104 chr20 60817428 60817611 -5850394 - L2 LINE L2 -5 3308 3120 480 234 14 69 chr20 60818098 60818243 -5849762 + MER20 DNA MER1_type 83 219 0 193 298 0 18 chr20 60819481 60819538 -5848467 - L2 LINE L2 -1 3271 3216 1093 236 151 24 chr20 60819813 60820144 -5847861 - LTR16A LTR ERVL 0 450 78 1026 144 0 0 chr20 60820224 60820404 -5847601 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 892 154 11 0 chr20 60820410 60820585 -5847420 + CT-rich Low_complexity Low_complexity 2 178 0 205 240 0 0 chr20 60820594 60820644 -5847361 - L2 LINE L2 0 3313 3264 1762 159 57 109 chr20 60821560 60822108 -5845897 - L1MB4 LINE L1 -14 6166 5648 1123 112 89 5 chr20 60822101 60822315 -5845690 - L1M4c LINE L1 -3884 2500 2269 * 330 26 0 0 chr20 60822316 60822355 -5845650 + (TA)n Simple_repeat Simple_repeat 1 39 0 1282 174 72 38 chr20 60822364 60822628 -5845377 - AluJo SINE Alu -35 277 5 4082 130 0 2 chr20 60822696 60823288 -5844717 - L1PA15 LINE L1 -2 6163 5573 209 349 47 38 chr20 60825111 60825217 -5842788 - L2 LINE L2 -22 3250 3144 379 304 113 39 chr20 60825418 60825622 -5842383 + MIR SINE MIR 14 232 -30 582 195 104 62 chr20 60825713 60825954 -5842051 - Charlie1b DNA MER1_type -42 481 231 500 234 141 5 chr20 60825929 60826113 -5841892 - Charlie1b DNA MER1_type -314 209 1 * 713 296 21 0 chr20 60826113 60826302 -5841703 - MIR SINE MIR -64 198 6 602 190 0 43 chr20 60827508 60827624 -5840381 - MER81 DNA DNA -3 111 1 280 267 11 11 chr20 60828168 60828258 -5839747 + LTR67 LTR ERVL 459 548 -9 240 200 0 0 chr20 60828312 60828372 -5839633 + (TCCA)n Simple_repeat Simple_repeat 2 61 0 544 222 56 35 chr20 60828482 60828680 -5839325 - L1ME3 LINE L1 -18 6144 5943 2265 112 7 0 chr20 60829785 60830090 -5837915 - AluSx SINE Alu -5 307 1 404 348 53 13 chr20 60830210 60830437 -5837568 + MIR SINE MIR 16 251 -11 432 283 106 0 chr20 60830582 60830762 -5837243 + L1MC4a LINE L1 5629 5827 -1981 2041 120 10 33 chr20 60830837 60831137 -5836868 - AluJo SINE Alu -19 293 1 266 241 0 0 chr20 60832457 60832511 -5835494 + MIR SINE MIR 123 176 -86 1766 223 45 47 chr20 60832541 60832878 -5835127 - L1MC3 LINE L1 -7 7778 7440 2034 124 7 0 chr20 60832878 60833195 -5834810 - AluSq SINE Alu 0 319 1 1766 223 45 47 chr20 60833195 60833385 -5834620 - L1MC3 LINE L1 -345 7440 7251 945 201 32 36 chr20 60835268 60835487 -5832518 - MER20 DNA MER1_type -1 218 1 1361 110 6 6 chr20 60838186 60838368 -5829637 - AluSg SINE Alu -128 182 1 2133 190 31 15 chr20 60838374 60839161 -5828844 - L1M3 LINE L1 -572 5611 4821 572 292 62 0 chr20 60839675 60839867 -5828138 + L2 LINE L2 2066 2269 -1045 215 264 185 15 chr20 60839827 60839964 -5828041 + MIR SINE MIR 43 204 -4 * 2304 110 0 0 chr20 60840220 60840521 -5827484 - AluSp SINE Alu -12 301 1 2873 178 12 4 chr20 60840645 60841127 -5826878 - MER66B LTR ERV1 0 486 1 384 297 71 63 chr20 60841546 60841815 -5826190 + L2 LINE L2 2421 2691 -623 1315 201 46 106 chr20 60841918 60842332 -5825673 + MLT1C-int LTR MaLR 983 1371 0 707 267 133 27 chr20 60842337 60842749 -5825256 + MLT1C LTR MaLR 6 461 -6 702 302 108 25 chr20 60842796 60843157 -5824848 + L2 LINE L2 2922 3312 -1 596 349 20 8 chr20 60844370 60844625 -5823380 + MIR SINE MIR 3 260 -2 213 310 158 79 chr20 60845351 60845554 -5822451 + L2 LINE L2 3053 3271 -1 186 217 105 98 chr20 60845655 60845798 -5822207 - MIR SINE MIR 0 262 119 455 277 169 24 chr20 60845892 60846141 -5821864 - MER113 DNA MER1_type? -34 487 203 286 148 0 19 chr20 60846134 60846188 -5821817 - Alu SINE Alu -7 295 243 * 388 295 27 82 chr20 60846912 60847095 -5820910 + MIR SINE MIR 27 199 -63 226 333 0 0 chr20 60847114 60847177 -5820828 - L2 LINE L2 -20 3293 3231 191 352 56 0 chr20 60847335 60847406 -5820599 - L2 LINE L2 -199 3073 2999 376 311 242 23 chr20 60847434 60847785 -5820220 + L2 LINE L2 2885 3312 -1 213 39 0 0 chr20 60847868 60847894 -5820111 + (T)n Simple_repeat Simple_repeat 1 26 0 233 259 94 89 chr20 60848753 60848977 -5819028 + MLT1H LTR MaLR 130 354 -195 690 253 127 31 chr20 60849188 60849417 -5818588 - MIR SINE MIR -10 252 2 321 26 0 0 chr20 60849902 60849940 -5818065 + (TG)n Simple_repeat Simple_repeat 1 38 0 980 269 111 56 chr20 60850460 60850835 -5817170 - MLT1K LTR MaLR -8 580 164 1957 179 133 33 chr20 60850835 60851294 -5816711 - MLT1D LTR MaLR 0 505 1 980 269 111 56 chr20 60851294 60851468 -5816537 - MLT1K LTR MaLR -424 164 1 217 216 108 36 chr20 60852251 60852362 -5815643 - MIR SINE MIR -134 128 10 * 424 365 0 22 chr20 60852357 60852535 -5815470 + MIR SINE MIR 18 191 -71 225 191 0 0 chr20 60852763 60852805 -5815200 + MER113 DNA MER1_type? 261 302 -219 1878 207 14 8 chr20 60853497 60853860 -5814145 + MLT1A1 LTR MaLR 1 365 0 436 280 100 53 chr20 60854054 60854439 -5813566 - MLT1G LTR MaLR -3 587 165 816 161 0 0 chr20 60854503 60854621 -5813384 - FLAM_C SINE Alu -20 123 6 231 36 0 0 chr20 60855290 60855318 -5812687 + (CACCC)n Simple_repeat Simple_repeat 3 30 0 280 270 45 0 chr20 60857498 60857587 -5810418 + MIR3 SINE MIR 87 179 -29 689 241 7 0 chr20 60857990 60858131 -5809874 + MER45A DNA AcHobo 37 178 0 391 170 0 59 chr20 60858929 60859064 -5808941 + CT-rich Low_complexity Low_complexity 4 130 0 318 122 0 0 chr20 60860359 60860408 -5807597 - MLT2D LTR ERVL 0 414 366 1561 179 74 17 chr20 60860532 60860884 -5807121 - MLT2D LTR ERVL -41 373 2 187 181 106 117 chr20 60861232 60861326 -5806679 + MIR SINE MIR 29 121 -141 216 0 0 0 chr20 60861518 60861542 -5806463 + (A)n Simple_repeat Simple_repeat 1 24 0 2222 119 0 0 chr20 60861785 60862079 -5805926 + AluSx SINE Alu 1 294 -18 386 311 68 11 chr20 60862240 60862417 -5805588 - MIR SINE MIR -60 202 16 1257 173 0 41 chr20 60862604 60862824 -5805181 - AluJo SINE Alu -17 295 85 466 271 129 19 chr20 60863412 60863622 -5804383 + MIR SINE MIR 12 244 -18 200 369 54 31 chr20 60863738 60863868 -5804137 - L3 LINE CR1 -184 1393 1261 509 217 51 40 chr20 60865850 60866025 -5801980 - MER96B DNA MER1_type? 0 417 241 3341 149 79 15 chr20 60866156 60866753 -5801252 - MER41B LTR ERV1 0 635 1 241 280 0 103 chr20 60868126 60868233 -5799772 - L2 LINE L2 0 3272 3177 201 286 20 0 chr20 60868835 60868884 -5799121 + L2 LINE L2 3213 3262 -10 332 230 48 40 chr20 60869276 60869402 -5798603 - LTR67 LTR ERVL -3 554 428 565 255 77 85 chr20 60870590 60870825 -5797180 - MER102a DNA MER1_type -1 329 97 2176 104 3 7 chr20 60870839 60871128 -5796877 + AluSc SINE Alu 13 300 -9 227 264 24 88 chr20 60871178 60871303 -5796702 + L2 LINE L2 3149 3265 -7 970 298 154 25 chr20 60872840 60873451 -5794554 + MER115 DNA AcHobo 1 690 -3 2345 77 3 55 chr20 60874353 60874679 -5793326 + AluSc SINE Alu 1 309 0 303 253 32 42 chr20 60876363 60876458 -5791547 + Charlie8 DNA MER1_type 27 120 -2297 565 289 190 14 chr20 60878340 60878703 -5789302 - L2 LINE L2 0 3313 2887 320 238 115 33 chr20 60882597 60882719 -5785286 - MER45A DNA AcHobo -39 139 8 532 343 142 38 chr20 60882830 60883303 -5784702 - HAL1 LINE L1 -844 1663 1142 379 248 92 35 chr20 60883483 60883624 -5784381 - MIR SINE MIR -44 218 70 1140 273 143 35 chr20 60884058 60884603 -5783402 - MER21B LTR ERV1 -69 794 191 2483 74 0 0 chr20 60885118 60885414 -5782591 - AluY SINE Alu -15 296 1 246 281 129 36 chr20 60885930 60886154 -5781851 + L2 LINE L2 2733 2977 -337 352 311 10 0 chr20 60886742 60886845 -5781160 + L2 LINE L2 3209 3312 -1 187 254 32 16 chr20 60886863 60886926 -5781079 - L2 LINE L2 -88 3225 3162 2111 121 0 3 chr20 60887406 60887688 -5780317 - AluSx SINE Alu -31 281 1 21 100 0 0 chr20 60887695 60887765 -5780240 + AT_rich Low_complexity Low_complexity 1 70 0 1166 259 116 62 chr20 60888139 60888640 -5779365 - MLT1H LTR MaLR 0 549 22 339 312 161 9 chr20 60888902 60889120 -5778885 + MIR SINE MIR 12 262 0 258 312 92 18 chr20 60890452 60890561 -5777444 + MIR SINE MIR 45 161 -101 253 86 0 0 chr20 60890561 60890596 -5777409 + MLT1F1 LTR MaLR 273 307 -235 498 215 0 19 chr20 60890610 60890717 -5777288 + MLT1F1 LTR MaLR 414 518 -49 610 239 44 0 chr20 60890906 60891086 -5776919 + MER53 DNA DNA 1 188 -1 22 0 0 0 chr20 60891164 60891186 -5776819 + AT_rich Low_complexity Low_complexity 1 22 0 315 361 17 8 chr20 60891217 60891336 -5776669 + L1ME LINE L1 5497 5616 -505 487 161 35 0 chr20 60892337 60892413 -5775592 - ORSL DNA AcHobo 0 275 194 1861 19 0 14 chr20 60892413 60892623 -5775382 - AluYb8 SINE Alu -9 309 103 2391 110 3 0 chr20 60892651 60892961 -5775044 - AluSx SINE Alu -1 311 1 277 65 0 0 chr20 60892961 60893007 -5774998 - ORSL DNA AcHobo -69 206 161 273 207 0 0 chr20 60893047 60893105 -5774900 + MIR SINE MIR 81 138 -70 193 333 25 0 chr20 60893347 60893428 -5774577 - MIR SINE MIR -80 182 100 287 257 27 0 chr20 60893601 60893675 -5774330 + L1MC/D LINE L1 5574 5649 -2159 275 267 23 0 chr20 60894354 60894440 -5773565 - ORSL DNA AcHobo -165 110 23 555 262 84 33 chr20 60894786 60895000 -5773005 + MIR SINE MIR 24 248 -14 273 252 54 38 chr20 60895679 60895801 -5772204 + MIR SINE MIR 42 163 -45 225 317 84 21 chr20 60895868 60896010 -5771995 - L2 LINE L2 -222 3050 2900 600 205 4 8 chr20 60896011 60896521 -5771484 + (TG)n Simple_repeat Simple_repeat 1 508 0 428 243 0 6 chr20 60896558 60896739 -5771266 + (TG)n Simple_repeat Simple_repeat 1 180 0 191 355 72 7 chr20 60897571 60897709 -5770296 - MIR SINE MIR -14 248 102 801 162 58 0 chr20 60897797 60897951 -5770054 - MER20 DNA MER1_type -1 218 56 253 191 0 138 chr20 60897958 60898052 -5769953 - MER20 DNA MER1_type -138 81 1 870 224 81 149 chr20 60898689 60899273 -5768732 + MLT1H LTR MaLR 4 547 -2 197 270 48 0 chr20 60899869 60899932 -5768073 + MIR SINE MIR 106 171 -91 224 293 24 12 chr20 60900025 60900107 -5767898 + MIR SINE MIR 63 145 -117 1721 136 89 14 chr20 60900273 60900599 -5767406 - THE1C LTR MaLR -30 402 1 1539 211 49 3 chr20 60900599 60900925 -5767080 - MLT2C1 LTR ERVL -27 370 30 252 0 0 0 chr20 60901179 60901207 -5766798 + (TG)n Simple_repeat Simple_repeat 1 28 0 476 65 0 140 chr20 60901307 60901400 -5766605 - MADE1 DNA Mariner 0 80 1 1007 223 31 0 chr20 60901705 60901934 -5766071 + MER58B DNA MER1_type 104 339 -2 312 274 32 89 chr20 60902166 60902323 -5765682 + L2 LINE L2 2882 3029 -243 4714 184 38 24 chr20 60902362 60903357 -5764648 - L1MC3 LINE L1 -601 7184 6176 679 243 58 34 chr20 60904012 60904218 -5763787 + MIR SINE MIR 32 242 -20 737 154 3 25 chr20 60904243 60904612 -5763393 + (ATG)n Simple_repeat Simple_repeat 1 360 0 845 249 32 126 chr20 60904766 60905204 -5762801 - LTR16A1 LTR ERVL 0 457 61 264 338 0 0 chr20 60905676 60905756 -5762249 + MIR3 SINE MIR 118 197 -11 252 222 0 32 chr20 60906627 60906690 -5761315 + MIR SINE MIR 116 176 -86 478 136 9 9 chr20 60906782 60906892 -5761113 + (TCCA)n Simple_repeat Simple_repeat 1 110 0 1674 181 7 7 chr20 60907239 60907526 -5760479 + AluJo SINE Alu 18 304 -8 495 277 102 0 chr20 60908164 60908341 -5759664 + Charlie8 DNA MER1_type 75 269 -2148 204 125 0 0 chr20 60908378 60908410 -5759595 + (AGGGGG)n Simple_repeat Simple_repeat 3 34 0 217 270 122 17 chr20 60909838 60909953 -5758052 + MIR SINE MIR 17 143 -119 674 174 29 17 chr20 60910389 60910872 -5757133 + CT-rich Low_complexity Low_complexity 1 489 0 346 170 57 13 chr20 60910902 60911061 -5756944 + CT-rich Low_complexity Low_complexity 1 166 0 262 292 29 88 chr20 60912040 60912087 -5755918 + L2 LINE L2 3142 3190 -82 2141 99 51 0 chr20 60912087 60912379 -5755626 - AluSx SINE Alu -5 307 1 262 292 29 88 chr20 60912379 60912468 -5755537 + L2 LINE L2 3190 3270 -2 287 257 27 0 chr20 60913823 60913897 -5754108 - L1MC3 LINE L1 -2159 5649 5574 224 309 25 0 chr20 60914070 60914151 -5753854 + MIR SINE MIR 100 182 -80 341 200 0 0 chr20 60914390 60914455 -5753550 - MIR SINE MIR -69 139 75 247 271 104 10 chr20 60914547 60914643 -5753362 + MIR SINE MIR 43 147 -115 427 226 10 10 chr20 60915878 60915980 -5752025 - L1MC3 LINE L1 -10 7775 7674 325 238 133 0 chr20 60915981 60916086 -5751919 - MIR SINE MIR -96 166 48 210 360 32 8 chr20 60916694 60916819 -5751186 - MIR SINE MIR -3 259 132 758 258 45 0 chr20 60916828 60917049 -5750956 - L1MD2 LINE L1 -16 6343 6113 303 247 0 39 chr20 60917050 60917127 -5750878 - MIR SINE MIR -108 154 81 366 23 0 0 chr20 60917361 60917404 -5750601 + (TG)n Simple_repeat Simple_repeat 2 44 0 2159 142 10 0 chr20 60918831 60919140 -5748865 + AluSx SINE Alu 1 312 0 250 316 137 5 chr20 60919159 60919371 -5748634 + L2 LINE L2 2732 2971 -343 209 208 65 91 chr20 60919717 60919794 -5748211 - MIR SINE MIR -63 145 71 245 277 53 11 chr20 60921364 60921458 -5746547 - MIR SINE MIR -44 218 121 259 260 82 0 chr20 60921562 60921635 -5746370 - L2 LINE L2 -3 3310 3232 193 341 111 8 chr20 60921915 60922041 -5745964 + L2 LINE L2 3175 3313 0 366 257 6 8 chr20 60922041 60922328 -5745677 + (TGGA)n Simple_repeat Simple_repeat 1 286 0 1167 294 46 16 chr20 60922339 60922785 -5745220 - LTR16A LTR ERVL 0 457 2 473 341 66 4 chr20 60922838 60923096 -5744909 - HERVL LTR ERVL -1102 4552 4279 2347 319 50 55 chr20 60923215 60924910 -5743095 - HERVL LTR ERVL -1281 4204 2518 593 274 90 77 chr20 60925645 60926035 -5741970 - L2 LINE L2 -52 3261 2867 634 181 7 51 chr20 60928883 60929021 -5738984 + FLAM_C SINE Alu 1 132 -1 1071 215 36 64 chr20 60929667 60930017 -5737988 - L1ME2 LINE L1 -10 6154 5818 301 148 79 10 chr20 60930035 60930136 -5737869 + CT-rich Low_complexity Low_complexity 3 110 0 1792 185 10 16 chr20 60930153 60930467 -5737538 - AluJo SINE Alu 0 312 1 1105 262 90 3 chr20 60930472 60930839 -5737166 - L1ME2 LINE L1 -343 5821 5423 202 225 0 0 chr20 60931677 60931717 -5736288 + (ATG)n Simple_repeat Simple_repeat 3 42 0 238 299 205 24 chr20 60932277 60932404 -5735601 - MIR SINE MIR -112 150 1 234 327 48 36 chr20 60932620 60932785 -5735220 - L1MC4a LINE L1 -1872 5936 5770 518 341 97 13 chr20 60932843 60933154 -5734851 - L1MC4a LINE L1 -2144 5664 5328 215 351 72 0 chr20 60933249 60933360 -5734645 + MIR3 SINE MIR 41 159 -49 326 335 92 29 chr20 60933386 60933592 -5734413 + L3b LINE CR1 1266 1484 -99 329 345 22 22 chr20 60934442 60934581 -5733424 - L2 LINE L2 -9 3263 3125 192 315 19 0 chr20 60935517 60935571 -5732434 - L2 LINE L2 -19 3294 3240 238 314 19 0 chr20 60935766 60935871 -5732134 - MER113 DNA MER1_type? -414 107 1 219 336 57 41 chr20 60936235 60936357 -5731648 + MIR SINE MIR 23 146 -62 192 158 0 0 chr20 60937083 60937121 -5730884 + (TA)n Simple_repeat Simple_repeat 1 38 0 475 278 8 28 chr20 60938775 60939100 -5728905 + G-rich Low_complexity Low_complexity 1 318 0 420 294 6 11 chr20 60939023 60939203 -5728802 + GA-rich Low_complexity Low_complexity 1 179 0 * 534 316 5 19 chr20 60939225 60939629 -5728376 + G-rich Low_complexity Low_complexity 1 398 0 404 279 5 40 chr20 60939602 60940057 -5727948 + GA-rich Low_complexity Low_complexity 1 439 0 * 194 128 26 0 chr20 60940089 60940128 -5727877 + GA-rich Low_complexity Low_complexity 3 42 0 268 200 147 32 chr20 60941365 60941460 -5726545 + MER113 DNA MER1_type? 221 326 -195 1330 126 27 31 chr20 60942526 60942748 -5725257 + AluJo SINE Alu 86 306 -6 211 290 28 110 chr20 60943583 60943652 -5724353 + L2 LINE L2 2647 2699 -615 1885 161 3 20 chr20 60943652 60943956 -5724049 + AluJb SINE Alu 1 299 -13 211 290 28 110 chr20 60943956 60944031 -5723974 + L2 LINE L2 2699 2779 -535 1372 219 105 43 chr20 60944110 60944575 -5723430 - MLT1D LTR MaLR -6 499 6 481 321 130 7 chr20 60944589 60944888 -5723117 - LTR16C LTR ERVL 0 491 156 1025 260 123 12 chr20 60945845 60946268 -5721737 + MLT1K LTR MaLR 114 583 -5 376 173 53 0 chr20 60946272 60946347 -5721658 + MIR SINE MIR 98 176 -86 523 230 99 47 chr20 60946766 60946957 -5721048 - MLT1K LTR MaLR 0 588 388 465 227 52 76 chr20 60946987 60947159 -5720846 - MLT1K LTR MaLR -278 310 143 335 229 92 18 chr20 60947295 60947404 -5720601 - MIR SINE MIR -97 165 49 764 189 15 6 chr20 60948145 60948487 -5719518 + (TCCA)n Simple_repeat Simple_repeat 1 345 0 306 129 48 0 chr20 60948867 60948929 -5719076 + MER53 DNA DNA 94 158 -31 309 218 9 118 chr20 60948991 60949101 -5718904 + MIR SINE MIR 63 160 -102 522 332 43 36 chr20 60950306 60950649 -5717356 - MLT1L LTR MaLR -224 391 3 194 299 41 75 chr20 60950669 60950816 -5717189 - MIR SINE MIR 0 262 121 191 161 23 58 chr20 60951560 60951647 -5716358 + (TCTCTG)n Simple_repeat Simple_repeat 1 84 0 306 337 132 34 chr20 60951647 60952027 -5715978 - HAL1 LINE L1 -1216 1291 875 234 0 0 0 chr20 60952053 60952079 -5715926 + (CA)n Simple_repeat Simple_repeat 1 26 0 211 267 0 0 chr20 60952173 60952218 -5715787 + (TG)n Simple_repeat Simple_repeat 1 45 0 212 214 18 0 chr20 60952675 60952731 -5715274 + (CA)n Simple_repeat Simple_repeat 2 58 0 249 83 0 0 chr20 60952886 60952922 -5715083 + (CA)n Simple_repeat Simple_repeat 1 36 0 314 23 23 0 chr20 60953113 60953156 -5714849 + (TG)n Simple_repeat Simple_repeat 2 45 0 240 111 0 0 chr20 60953550 60953586 -5714419 + (TC)n Simple_repeat Simple_repeat 1 36 0 261 0 0 0 chr20 60953686 60953715 -5714290 + (TG)n Simple_repeat Simple_repeat 2 30 0 274 221 44 0 chr20 60954165 60954233 -5713772 + (CA)n Simple_repeat Simple_repeat 2 72 0 339 25 0 0 chr20 60954951 60954991 -5713014 + (CA)n Simple_repeat Simple_repeat 2 41 0 285 29 0 0 chr20 60955172 60955206 -5712799 + (CA)n Simple_repeat Simple_repeat 2 35 0 423 0 0 0 chr20 60955503 60955550 -5712455 + (CA)n Simple_repeat Simple_repeat 1 47 0 192 152 0 0 chr20 60956225 60956258 -5711747 + (CA)n Simple_repeat Simple_repeat 2 34 0 245 182 0 0 chr20 60956447 60956502 -5711503 + (TG)n Simple_repeat Simple_repeat 2 56 0 390 21 0 0 chr20 60956593 60956640 -5711365 + (CA)n Simple_repeat Simple_repeat 2 48 0 270 0 0 0 chr20 60956983 60957013 -5710992 + (CA)n Simple_repeat Simple_repeat 1 30 0 194 160 20 0 chr20 60957355 60957405 -5710600 + CT-rich Low_complexity Low_complexity 2 52 0 353 100 0 17 chr20 60957405 60957465 -5710540 + (CA)n Simple_repeat Simple_repeat 1 59 0 213 175 0 0 chr20 60957606 60957646 -5710359 + CT-rich Low_complexity Low_complexity 3 42 0 204 135 0 0 chr20 60957828 60957865 -5710140 + (TC)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr20 60958855 60958876 -5709129 + GC_rich Low_complexity Low_complexity 1 21 0 381 286 16 11 chr20 60959223 60959399 -5708606 + MIR SINE MIR 18 195 -67 646 292 156 25 chr20 60960012 60960416 -5707589 - L2 LINE L2 -2 3311 2855 2278 108 3 0 chr20 60963401 60963697 -5704308 - AluSx SINE Alu -15 297 1 3126 114 85 0 chr20 60964162 60964646 -5703359 + MER1A DNA MER1_type 3 527 0 24 32 0 0 chr20 60964694 60964725 -5703280 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr20 60964753 60964776 -5703229 + AT_rich Low_complexity Low_complexity 1 23 0 216 266 16 0 chr20 60964816 60964880 -5703125 + GA-rich Low_complexity Low_complexity 2 66 0 767 86 0 34 chr20 60964902 60965019 -5702986 + L1PA10 LINE L1 6056 6168 0 278 208 38 0 chr20 60965467 60965520 -5702485 - Charlie8 DNA MER1_type -2230 187 133 251 316 21 21 chr20 60966464 60966559 -5701446 - MIR SINE MIR -10 252 158 324 235 94 0 chr20 60966560 60966645 -5701360 + MER20 DNA MER1_type 34 126 -93 290 265 24 36 chr20 60966648 60966731 -5701274 - MIR SINE MIR -96 166 85 980 223 9 23 chr20 60968933 60969148 -5698857 + MER20 DNA MER1_type 1 212 -7 419 279 100 11 chr20 60969157 60969224 -5698781 - L1ME3 LINE L1 -22 6140 6080 2211 153 105 13 chr20 60969224 60969683 -5698322 - MLT1D LTR MaLR -4 501 1 419 279 100 11 chr20 60969683 60969805 -5698200 - L1ME3 LINE L1 -82 6080 5934 2511 149 33 35 chr20 60970848 60971294 -5696711 - L1MC2 LINE L1 -24 6320 5874 2288 119 10 0 chr20 60971294 60971597 -5696408 - AluSx SINE Alu -6 306 1 2511 149 33 35 chr20 60971597 60971641 -5696364 - L1MC2 LINE L1 -470 5874 5831 262 237 0 0 chr20 60973131 60973190 -5694815 - L2 LINE L2 -1 3271 3213 187 338 28 0 chr20 60973514 60973585 -5694420 + MIR SINE MIR 34 106 -102 204 40 0 0 chr20 60973602 60973627 -5694378 + (CAG)n Simple_repeat Simple_repeat 1 25 0 388 289 37 37 chr20 60973691 60973826 -5694179 - MIR SINE MIR -81 181 47 336 102 0 0 chr20 60975429 60975478 -5692527 + (TTCC)n Simple_repeat Simple_repeat 3 51 0 325 263 85 0 chr20 60975482 60975600 -5692405 + Charlie8 DNA MER1_type 75 202 -2215 992 208 5 5 chr20 60976162 60976354 -5691651 + MER58A DNA MER1_type 24 215 -9 215 229 16 0 chr20 60976380 60976441 -5691564 + (TA)n Simple_repeat Simple_repeat 1 62 0 364 262 64 43 chr20 60976543 60976684 -5691321 + L1MC4 LINE L1 7847 8042 0 396 318 35 18 chr20 60978195 60978365 -5689640 + MIR SINE MIR 13 185 -77 264 321 9 19 chr20 60981297 60981403 -5686602 + L2 LINE L2 3162 3266 -6 516 275 6 45 chr20 60981718 60981896 -5686109 - MLT1K LTR MaLR -12 576 406 260 263 211 18 chr20 60982289 60982403 -5685602 - MIR SINE MIR -14 248 113 222 219 0 0 chr20 60982515 60982556 -5685449 + L2 LINE L2 3230 3270 -2 912 187 0 0 chr20 60982916 60983355 -5684650 + (TTCA)n Simple_repeat Simple_repeat 1 439 0 225 163 0 0 chr20 60983367 60983416 -5684589 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 218 374 82 14 chr20 60983421 60983568 -5684437 - L2 LINE L2 -2 3311 3155 345 243 63 9 chr20 60984547 60984658 -5683347 + MER45A DNA AcHobo 39 155 -23 2235 103 30 3 chr20 60985038 60985338 -5682667 - AluSg SINE Alu -2 308 1 2063 110 72 0 chr20 60985348 60985640 -5682365 - AluSq SINE Alu 0 313 1 2662 38 0 0 chr20 60987524 60987817 -5680188 - AluSg SINE Alu -7 303 11 615 315 92 38 chr20 60988046 60988437 -5679568 - Charlie8 DNA MER1_type -1917 500 89 607 273 45 11 chr20 60988490 60988666 -5679339 - LTR16C LTR ERVL 0 491 310 648 253 170 22 chr20 60988689 60988780 -5679225 - MER5C DNA MER1_type 0 324 248 2237 107 3 38 chr20 60988780 60989098 -5678907 + AluSg SINE Alu 1 307 -3 648 253 170 22 chr20 60989098 60989283 -5678722 - MER5C DNA MER1_type -76 248 7 996 205 0 5 chr20 60989570 60989755 -5678250 + MER5A DNA MER1_type 4 187 -2 775 186 31 77 chr20 60990855 60991049 -5676956 + MER20 DNA MER1_type 2 186 -33 550 39 0 0 chr20 60991066 60991143 -5676862 + L1PA4 LINE L1 6078 6154 -1 1533 319 24 34 chr20 60994479 60995103 -5672902 + HERV16 LTR ERVL 2302 2919 -2077 2347 109 3 0 chr20 60995144 60995455 -5672550 + AluSx SINE Alu 1 312 0 378 295 36 96 chr20 60995468 60995719 -5672286 + HERV16 LTR ERVL 3318 3553 -2101 370 327 116 15 chr20 60995739 60996066 -5671939 + LTR16A LTR ERVL 11 370 -80 285 204 0 0 chr20 60996231 60996285 -5671720 - MLT1J1 LTR MaLR -154 292 239 686 302 72 20 chr20 60996458 60996849 -5671156 - LTR16C LTR ERVL -1 490 80 631 173 8 29 chr20 60996989 60997235 -5670770 + CT-rich Low_complexity Low_complexity 1 240 0 227 275 14 0 chr20 60997510 60997579 -5670426 + (TG)n Simple_repeat Simple_repeat 1 70 0 369 0 0 0 chr20 60998478 60998519 -5669486 + (CA)n Simple_repeat Simple_repeat 2 42 0 196 305 95 9 chr20 60999684 60999789 -5668216 - MIR SINE MIR -43 219 106 674 278 32 0 chr20 60999857 61000044 -5667961 - MER3 DNA MER1_type -14 195 3 386 260 70 0 chr20 61000497 61000597 -5667408 + MIR SINE MIR 47 153 -55 624 228 108 60 chr20 61000840 61001108 -5666897 - LTR16A1 LTR ERVL -1 456 176 1154 101 0 0 chr20 61001991 61002178 -5665827 - AluSc SINE Alu 0 319 133 569 267 44 17 chr20 61002441 61002621 -5665384 + MIR SINE MIR 6 190 -72 2172 123 0 0 chr20 61004523 61004825 -5663180 + AluSc SINE Alu 3 304 -5 277 320 70 47 chr20 61004939 61005067 -5662938 - L2 LINE L2 -1 3271 3141 210 345 43 26 chr20 61007067 61007183 -5660822 + MIR SINE MIR 34 151 -111 286 344 30 0 chr20 61007286 61007417 -5660588 - L2 LINE L2 -1 3271 3137 341 293 43 130 chr20 61007558 61007858 -5660147 - L2 LINE L2 -21 3251 2978 275 229 36 36 chr20 61008415 61008498 -5659507 + L1MC5 LINE L1 5689 5771 -2037 438 193 7 21 chr20 61008506 61008639 -5659366 - MER20 DNA MER1_type 0 219 1 2445 97 7 0 chr20 61009710 61010020 -5657985 + AluSx SINE Alu 1 312 0 208 338 0 25 chr20 61010377 61010457 -5657548 + MIR SINE MIR 1 78 -184 218 294 132 37 chr20 61010685 61010821 -5657184 + L2 LINE L2 3025 3173 -99 241 305 34 68 chr20 61011013 61011158 -5656847 + L2 LINE L2 3142 3281 -32 1774 135 128 76 chr20 61011158 61011565 -5656440 + MSTA LTR MaLR 1 428 0 241 305 34 68 chr20 61011565 61011596 -5656409 + L2 LINE L2 3281 3312 -1 281 243 97 39 chr20 61012254 61012460 -5655545 - L1MC5 LINE L1 -214 7747 7530 516 232 51 0 chr20 61012476 61012614 -5655391 + L1MC5 LINE L1 6923 7067 -894 443 294 26 0 chr20 61012849 61013002 -5655003 - MER45A DNA AcHobo -6 172 16 355 236 138 0 chr20 61013985 61014108 -5653897 - MER5B DNA MER1_type -38 140 1 706 217 30 0 chr20 61014879 61015045 -5652960 - MER5A DNA MER1_type -18 171 1 294 311 0 0 chr20 61015078 61015168 -5652837 - MIR SINE MIR -127 135 46 438 276 28 28 chr20 61015274 61015419 -5652586 + MER5B DNA MER1_type 15 159 -19 534 203 158 6 chr20 61015602 61015760 -5652245 + MER53 DNA DNA 1 182 -7 1775 261 72 5 chr20 61016375 61016954 -5651051 - MLT1E2 LTR MaLR -8 618 1 285 197 42 56 chr20 61018000 61018071 -5649934 - L2 LINE L2 -5 3267 3198 417 235 208 20 chr20 61018106 61018255 -5649750 - MER5B DNA MER1_type 0 178 2 212 325 48 0 chr20 61018709 61018792 -5649213 + L2 LINE L2 3201 3287 -26 202 219 0 0 chr20 61019024 61019065 -5648940 + CT-rich Low_complexity Low_complexity 4 44 0 999 104 0 92 chr20 61019098 61019271 -5648734 - MER1B DNA MER1_type 0 339 183 1946 90 35 38 chr20 61019271 61019672 -5648333 - LTR7 LTR ERV1 0 450 1 777 165 177 0 chr20 61019673 61019831 -5648174 - MER1B DNA MER1_type -111 186 1 255 269 26 0 chr20 61019835 61019889 -5648116 - L2 LINE L2 -499 2815 2757 2232 193 99 10 chr20 61019889 61020402 -5647603 - MER89 LTR ERV1 0 559 1 255 269 26 0 chr20 61020402 61020425 -5647580 - L2 LINE L2 -557 2757 2736 1040 167 57 20 chr20 61020441 61020687 -5647318 - L1MB8 LINE L1 -14 6164 5910 840 237 119 13 chr20 61020843 61021155 -5646850 - L1ME2 LINE L1 -71 6093 5749 604 263 94 6 chr20 61023084 61023255 -5644750 - MIR SINE MIR -68 194 9 353 326 143 22 chr20 61023271 61023501 -5644504 - MIR SINE MIR -4 258 1 504 312 106 25 chr20 61023544 61023781 -5644224 - MIR SINE MIR -1 261 6 2054 125 0 0 chr20 61024024 61024319 -5643686 - AluSx SINE Alu -17 295 1 855 239 131 30 chr20 61024479 61024776 -5643229 + MLT1K LTR MaLR 14 340 -248 2330 221 66 14 chr20 61024801 61025316 -5642689 + MLT1F LTR MaLR 1 542 0 566 225 115 22 chr20 61025322 61025504 -5642501 + MLT1K LTR MaLR 390 588 0 494 205 51 8 chr20 61026725 61026842 -5641163 - MIR SINE MIR -110 152 31 382 297 116 47 chr20 61027864 61028312 -5639693 - L2 LINE L2 -16 3297 2819 262 219 16 47 chr20 61028356 61028420 -5639585 - MLT1D LTR MaLR -443 62 1 1808 158 10 3 chr20 61028591 61028888 -5639117 + AluJo SINE Alu 1 299 -13 290 298 149 0 chr20 61029130 61029224 -5638781 - L2 LINE L2 -3 3310 3203 * 329 330 3 8 chr20 61029192 61029328 -5638677 - MIR SINE MIR -73 135 2 1576 142 15 33 chr20 61029624 61029898 -5638107 + THE1C LTR MaLR 1 269 -106 395 348 47 21 chr20 61030017 61030253 -5637752 - L2 LINE L2 -654 2660 2419 421 251 86 0 chr20 61031211 61031374 -5636631 + L1M4 LINE L1 4335 4511 -1635 2074 169 84 62 chr20 61031394 61031931 -5636074 - MER4A LTR ERV1 0 664 116 538 96 160 11 chr20 61032097 61032191 -5635814 - MER4A LTR ERV1 -556 108 1 1605 247 19 11 chr20 61032209 61032687 -5635318 + L1M4 LINE L1 4569 5050 -1096 450 294 28 0 chr20 61032799 61032942 -5635063 - MIR SINE MIR -25 237 91 2477 50 0 0 chr20 61032995 61033297 -5634708 - AluY SINE Alu -8 303 2 844 153 0 0 chr20 61033739 61033870 -5634135 + FLAM_C SINE Alu 1 131 -12 1096 233 74 35 chr20 61034461 61034800 -5633205 + MLT1C LTR MaLR 112 463 -4 367 245 47 9 chr20 61035175 61035281 -5632724 + MIR SINE MIR 93 202 -60 690 254 80 47 chr20 61035281 61035619 -5632386 + MLT1D LTR MaLR 1 349 -156 234 0 0 0 chr20 61035982 61036008 -5631997 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 909 83 0 0 chr20 61036008 61036128 -5631877 - AluY SINE Alu -191 120 1 983 300 38 46 chr20 61036139 61036818 -5631187 - L1M4 LINE L1 -846 5300 4627 830 290 57 15 chr20 61036819 61037027 -5630978 - L1M4 LINE L1 -1923 4223 4025 282 73 0 0 chr20 61037027 61037068 -5630937 + (TG)n Simple_repeat Simple_repeat 2 42 0 830 290 57 15 chr20 61037068 61037263 -5630742 - L1M4 LINE L1 -2121 4025 3803 594 331 8 41 chr20 61037359 61037604 -5630401 + MIR SINE MIR 2 238 -24 228 147 0 0 chr20 61037664 61037698 -5630307 - MER68 LTR ERV1 -14 548 515 662 285 143 24 chr20 61037978 61038357 -5629648 - L1M4 LINE L1 -2459 3687 3264 208 256 73 73 chr20 61038458 61038540 -5629465 + MIR SINE MIR 66 147 -61 2052 107 23 0 chr20 61038661 61038961 -5629044 + AluSq SINE Alu 1 307 -6 620 322 8 41 chr20 61039261 61039506 -5628499 - MIR SINE MIR -24 238 2 2070 103 0 64 chr20 61039946 61040275 -5627730 - AluY SINE Alu -3 308 1 2083 96 0 10 chr20 61041227 61041518 -5626487 + AluY SINE Alu 1 288 -23 344 290 36 29 chr20 61042051 61042189 -5625816 - MER5B DNA MER1_type -38 140 2 2302 222 70 25 chr20 61042267 61042838 -5625167 + MLT1E LTR MaLR 1 549 0 2023 197 66 34 chr20 61042952 61043424 -5624581 - MLT1D LTR MaLR 0 505 19 314 107 89 18 chr20 61043514 61043570 -5624435 - MER94 DNA DNA -41 93 34 379 224 136 31 chr20 61043621 61043787 -5624218 - L1MC5 LINE L1 -305 7656 7458 2946 133 33 2 chr20 61043787 61044247 -5623758 - MER101 LTR ERV1 0 474 1 379 224 136 31 chr20 61044247 61044308 -5623697 - L1MC5 LINE L1 -503 7458 7405 498 127 0 71 chr20 61044332 61044458 -5623547 - AluSp/q SINE Alu -11 302 186 1895 108 14 4 chr20 61044559 61044836 -5623169 + L1PA15 LINE L1 5884 6163 -2 1437 97 0 29 chr20 61044913 61045120 -5622885 - AluSg/x SINE Alu -10 302 102 1839 205 70 32 chr20 61045120 61045563 -5622442 - LTR2B LTR ERV1 0 490 31 26445 77 6 4 chr20 61045582 61048942 -5619063 - Harlequin LTR ERV1 -3 6893 3527 2111 95 3 20 chr20 61049965 61050269 -5617736 + AluSx SINE Alu 1 299 -13 429 242 109 30 chr20 61050510 61050675 -5617330 - MER5B DNA MER1_type 0 178 1 2327 85 0 3 chr20 61052046 61052351 -5615654 + AluSx SINE Alu 1 304 -8 654 246 43 5 chr20 61052928 61053115 -5614890 + MER20 DNA MER1_type 7 200 -19 667 248 8 0 chr20 61053330 61053459 -5614546 - MER90 LTR ERV1 0 614 485 2132 100 7 0 chr20 61053676 61053967 -5614038 + AluSq SINE Alu 1 293 -20 1522 255 54 10 chr20 61054806 61055214 -5612791 + L1ME1 LINE L1 17 442 -5981 1910 267 62 35 chr20 61055366 61056318 -5611687 + L1ME1 LINE L1 1851 2828 -4294 1124 268 86 0 chr20 61056350 61056734 -5611271 + L1ME1 LINE L1 2910 3326 -3615 816 292 23 0 chr20 61056962 61057222 -5610783 + L1ME1 LINE L1 4959 5224 -1717 992 191 34 1 chr20 61057421 61057633 -5610372 - L1M3c LINE L1 -4516 1841 1256 322 257 69 81 chr20 61057666 61057927 -5610078 + L1MC5 LINE L1 7637 7894 -67 256 242 0 0 chr20 61059382 61059444 -5608561 - Charlie1 DNA MER1_type -20 2741 2680 235 233 35 35 chr20 61059481 61059597 -5608408 - Charlie1 DNA MER1_type -66 2695 2580 290 246 29 0 chr20 61059597 61059666 -5608339 + L1ME1 LINE L1 6331 6401 -2179 594 196 75 95 chr20 61059745 61059769 -5608236 + L1ME1 LINE L1 6414 6437 -524 4132 129 49 69 chr20 61059769 61060570 -5607435 + LTR1 LTR ERV1 1 785 0 594 196 75 95 chr20 61060570 61060808 -5607197 + L1ME1 LINE L1 6437 6663 -298 414 271 21 29 chr20 61060813 61060953 -5607052 + L1ME LINE L1 5265 5403 -759 255 252 47 19 chr20 61060967 61061074 -5606931 + L1M4 LINE L1 2933 3042 -3104 * 990 218 22 36 chr20 61061071 61061346 -5606659 + L1M4 LINE L1 3775 4045 -2101 6274 238 39 15 chr20 61061446 61062572 -5605433 - L1MCa LINE L1 -1951 4475 3377 2172 104 10 0 chr20 61062572 61062880 -5605125 - AluY SINE Alu 0 311 1 6274 238 39 15 chr20 61062880 61064000 -5604005 - L1MCa LINE L1 -3049 3377 2175 1908 146 7 10 chr20 61064000 61064302 -5603703 - AluSx SINE Alu -11 301 1 225 154 0 0 chr20 61064304 61064343 -5603662 + CT-rich Low_complexity Low_complexity 1 39 0 1733 126 44 27 chr20 61064344 61064514 -5603491 - AluSq SINE Alu -14 299 120 2119 107 0 0 chr20 61064514 61064812 -5603193 - AluY SINE Alu -13 298 1 1733 126 44 27 chr20 61064812 61064935 -5603070 - AluSq SINE Alu -193 120 1 3023 279 74 19 chr20 61064951 61065286 -5602719 - L1MA9 LINE L1 -4 6308 5993 2212 71 7 7 chr20 61065286 61065580 -5602425 - AluSc SINE Alu -15 294 1 3023 279 74 19 chr20 61065580 61066053 -5601952 - L1MA9 LINE L1 -319 5993 5455 862 250 63 83 chr20 61067831 61068339 -5599666 + L1MC5 LINE L1 6732 7229 -732 203 56 0 83 chr20 61068732 61068751 -5599254 + (GGAA)n Simple_repeat Simple_repeat 4 20 -16 1610 177 6 25 chr20 61068751 61069068 -5598937 + AluJb SINE Alu 1 311 -1 203 56 0 83 chr20 61069068 61069084 -5598921 + (GGAA)n Simple_repeat Simple_repeat 20 36 0 2229 194 28 26 chr20 61069143 61069172 -5598833 + LOR1b LTR ERV1 1 28 -433 2277 79 0 10 chr20 61069172 61069476 -5598529 - AluY SINE Alu -10 301 1 2229 194 28 26 chr20 61069476 61069905 -5598100 + LOR1b LTR ERV1 28 460 -1 249 324 127 6 chr20 61070072 61070245 -5597760 + L1MC5 LINE L1 7701 7894 -67 1543 192 184 3 chr20 61070936 61071316 -5596689 + MER66A LTR ERV1 27 475 -3 2058 115 3 28 chr20 61071810 61072131 -5595874 + AluSq SINE Alu 1 313 0 358 300 20 0 chr20 61072600 61072700 -5595305 + L1ME LINE L1 5528 5629 -537 641 216 84 76 chr20 61072713 61072994 -5595011 + L1ME1 LINE L1 5590 5873 -291 713 273 137 18 chr20 61073032 61073386 -5594619 + L1MC/D LINE L1 5292 5691 -723 361 272 88 20 chr20 61073684 61073831 -5594174 + L1MC4a LINE L1 5535 5691 -2117 305 263 56 45 chr20 61073921 61074100 -5593905 + L1MC4a LINE L1 6051 6231 -1577 30 27 0 0 chr20 61074415 61074452 -5593553 + AT_rich Low_complexity Low_complexity 1 37 0 280 245 20 88 chr20 61074488 61074590 -5593415 + L1MC4a LINE L1 6626 6720 -1088 419 230 30 0 chr20 61074591 61074691 -5593314 + L1MC5 LINE L1 7007 7109 -852 4228 115 22 12 chr20 61074914 61075193 -5592812 + L1PB1 LINE L1 5500 5775 -376 189 0 0 0 chr20 61075193 61075214 -5592791 + (TA)n Simple_repeat Simple_repeat 2 22 0 4228 115 22 12 chr20 61075214 61075580 -5592425 + L1PB1 LINE L1 5775 6151 0 21 0 0 0 chr20 61075580 61075601 -5592404 + AT_rich Low_complexity Low_complexity 1 21 0 2494 68 0 3 chr20 61075677 61075973 -5592032 - AluY SINE Alu -7 304 10 1272 276 80 23 chr20 61076281 61076482 -5591523 + L1MC5 LINE L1 5354 5542 -2266 2004 144 3 7 chr20 61076482 61076787 -5591218 - AluJb SINE Alu -8 304 1 1272 276 80 23 chr20 61076787 61077111 -5590894 + L1MC5 LINE L1 5542 5909 -1899 2298 111 0 0 chr20 61077111 61077408 -5590597 - AluSq SINE Alu -16 297 1 198 0 0 0 chr20 61077448 61077470 -5590535 + (TG)n Simple_repeat Simple_repeat 1 22 0 1888 157 72 0 chr20 61077491 61077822 -5590183 + MLT1A1 LTR MaLR 11 365 0 2394 67 0 3 chr20 61077840 61078125 -5589880 - AluY SINE Alu -27 284 1 2136 252 39 72 chr20 61078448 61078750 -5589255 + L1MC5 LINE L1 6296 6606 -1355 180 0 0 0 chr20 61078750 61078770 -5589235 + (TA)n Simple_repeat Simple_repeat 2 21 0 2136 252 39 72 chr20 61078770 61079581 -5588424 + L1MC5 LINE L1 6606 7385 -576 2405 105 0 0 chr20 61079586 61079891 -5588114 + AluSx SINE Alu 1 305 -7 3602 200 65 21 chr20 61080020 61080667 -5587338 + L1MC1 LINE L1 4179 4796 -1537 2390 85 0 3 chr20 61080667 61080961 -5587044 - AluSq SINE Alu -20 293 1 3602 200 65 21 chr20 61080961 61082012 -5585993 + L1MC1 LINE L1 4796 5957 -376 354 293 0 0 chr20 61082012 61082144 -5585861 + L1M4 LINE L1 4965 5096 -1050 1890 150 71 6 chr20 61082173 61082526 -5585479 + L1MC1 LINE L1 5958 6333 0 27 0 0 0 chr20 61082624 61082651 -5585354 + AT_rich Low_complexity Low_complexity 1 27 0 43976 31 22 1 chr20 61082653 61088679 -5579326 - L1PA3 LINE L1 0 6155 2 1673 182 3 10 chr20 61088716 61089007 -5578998 + AluJb SINE Alu 1 289 -23 14489 189 38 21 chr20 61089127 61092662 -5575343 - L1 LINE L1 -1112 5216 1744 345 47 0 0 chr20 61092662 61092705 -5575300 + (TTTCC)n Simple_repeat Simple_repeat 2 44 0 14489 189 38 21 chr20 61092705 61093129 -5574876 - L1 LINE L1 -4584 1744 1329 2407 93 0 10 chr20 61093129 61093441 -5574564 - AluY SINE Alu -2 309 1 14489 189 38 21 chr20 61093441 61093909 -5574096 - L1 LINE L1 -4999 1329 699 248 163 54 109 chr20 61093911 61093979 -5574026 - L1M4c LINE L1 -3838 2544 2481 2185 84 31 0 chr20 61093979 61094265 -5573740 + AluY SINE Alu 1 295 -16 248 163 54 109 chr20 61094265 61094288 -5573717 - L1M4c LINE L1 -3901 2481 2458 943 189 148 41 chr20 61094293 61094563 -5573442 + LTR54B LTR ERV1 1 299 -199 699 306 95 9 chr20 61094663 61095117 -5572888 - L1M4c LINE L1 -4096 2467 1975 783 283 77 62 chr20 61095232 61095840 -5572165 - L1M4c LINE L1 -4451 2112 1347 616 238 70 71 chr20 61095960 61096388 -5571617 + L1MEc LINE L1 2178 2562 -3653 1474 219 95 40 chr20 61097204 61097678 -5570327 - MLT1D LTR MaLR -5 500 1 2605 281 42 21 chr20 61097955 61098727 -5569278 + L1PA13 LINE L1 1 788 -5999 8431 194 41 20 chr20 61098812 61099137 -5568868 + L1P LINE L1 3160 3477 -2669 2042 102 0 41 chr20 61099137 61099430 -5568575 + AluSx SINE Alu 32 312 0 8431 194 41 20 chr20 61099430 61100966 -5567039 + L1P LINE L1 3477 5059 -1087 8923 71 2 19 chr20 61101068 61102244 -5565761 - Harlequin LTR ERV1 -3392 3504 2349 912 131 0 7 chr20 61102223 61102376 -5565629 - Harlequin LTR ERV1 -4938 1958 1807 * 274 267 163 23 chr20 61102388 61102474 -5565531 + LTR8 LTR ERV1 156 253 -438 2333 66 19 3 chr20 61102474 61102791 -5565214 - HERVE LTR ERV1 -5174 1722 1401 * 5356 75 60 40 chr20 61102771 61103570 -5564435 - HERVE LTR ERV1 -5819 1077 263 808 105 13 72 chr20 61103550 61103702 -5564303 - HERVE LTR ERV1 -7416 397 255 * 2762 95 8 13 chr20 61103686 61104075 -5563930 - HERVE LTR ERV1 -6509 387 1 2036 178 93 32 chr20 61104075 61104537 -5563468 - LTR2B LTR ERV1 0 490 1 743 128 0 0 chr20 61104537 61104639 -5563366 - AluSc SINE Alu -206 103 2 567 267 58 72 chr20 61104766 61105125 -5562880 + MER115 DNA AcHobo 321 674 -19 966 157 34 6 chr20 61105906 61106084 -5561921 + MER53 DNA DNA 7 189 0 451 292 22 0 chr20 61107170 61107307 -5560698 - MIR SINE MIR -118 144 5 234 176 20 0 chr20 61107360 61107411 -5560594 - MER117 DNA MER1_type -55 142 91 303 252 55 24 chr20 61107483 61107610 -5560395 - LTR67 LTR ERVL -1 556 426 1002 174 82 0 chr20 61107829 61108036 -5559969 + L1MB4 LINE L1 5954 6177 -3 3650 170 50 13 chr20 61108071 61108784 -5559221 + L1MB3 LINE L1 5444 6183 0 1010 207 98 57 chr20 61109241 61109627 -5558378 + LTR37A LTR ERV1 5 406 -20 401 79 40 40 chr20 61110271 61110372 -5557633 + (CAGAGA)n Simple_repeat Simple_repeat 2 102 0 806 106 21 52 chr20 61110390 61110976 -5557029 + (CAGAGA)n Simple_repeat Simple_repeat 1 567 0 408 235 17 59 chr20 61110992 61111360 -5556645 + (CAGAGA)n Simple_repeat Simple_repeat 1 352 0 224 250 22 52 chr20 61111377 61111513 -5556492 + (CAGAGA)n Simple_repeat Simple_repeat 4 135 0 273 306 18 9 chr20 61111792 61111903 -5556102 + MER94 DNA DNA 17 128 -6 870 169 169 0 chr20 61112556 61112745 -5555260 + MER58A DNA MER1_type 1 221 -3 336 186 53 53 chr20 61113379 61113492 -5554513 - L2 LINE L2 -3 3269 3157 517 192 0 16 chr20 61113541 61113723 -5554282 + (TG)n Simple_repeat Simple_repeat 1 179 0 339 222 56 0 chr20 61114179 61114251 -5553754 - MER94 DNA DNA -1 133 58 263 319 7 14 chr20 61114961 61115102 -5552903 + GA-rich Low_complexity Low_complexity 1 140 0 689 126 38 14 chr20 61115102 61115316 -5552689 + (TGGA)n Simple_repeat Simple_repeat 1 219 0 1913 170 32 8 chr20 61115662 61116038 -5551967 - L1MB7 LINE L1 -19 6165 5781 1751 162 42 33 chr20 61116041 61116240 -5551765 - MER2 DNA MER2_type -4 341 136 1371 115 73 18 chr20 61116240 61116458 -5551547 - MER30 DNA MER1_type 0 230 1 1751 162 42 33 chr20 61116458 61116591 -5551414 - MER2 DNA MER2_type -209 136 6 1285 184 0 0 chr20 61116612 61116829 -5551176 - L1MB7 LINE L1 -415 5763 5547 346 170 57 13 chr20 61118050 61118209 -5549796 + CT-rich Low_complexity Low_complexity 1 166 0 240 285 29 88 chr20 61119188 61119235 -5548770 + L2 LINE L2 3142 3190 -82 2104 99 51 0 chr20 61119235 61119527 -5548478 - AluSx SINE Alu -5 307 1 240 285 29 88 chr20 61119527 61119616 -5548389 + L2 LINE L2 3190 3270 -2 298 257 27 0 chr20 61120971 61121045 -5546960 - L1MC/D LINE L1 -2159 5649 5574 263 207 0 0 chr20 61121541 61121599 -5546406 - MIR SINE MIR -70 138 81 302 65 0 0 chr20 61121639 61121685 -5546320 + ORSL DNA AcHobo 161 206 -69 2355 110 3 0 chr20 61121685 61121995 -5546010 + AluSx SINE Alu 1 311 -1 1837 10 0 15 chr20 61122023 61122227 -5545778 + AluYb8 SINE Alu 103 303 -15 569 140 0 32 chr20 61122227 61122309 -5545696 + ORSL DNA AcHobo 195 275 0 902 262 44 20 chr20 61123431 61123836 -5544169 - L1M4 LINE L1 -2646 3500 3086 * 3452 161 51 73 chr20 61123824 61124607 -5543398 - L1MB3 LINE L1 -1 6182 5417 1886 207 0 0 chr20 61124861 61125209 -5542796 + MER7A DNA MER2_type 1 346 0 2037 217 67 57 chr20 61125221 61125465 -5542540 - MER63C DNA MER1_type -166 894 654 1046 38 38 6 chr20 61125465 61125623 -5542382 + (TTTC)n Simple_repeat Simple_repeat 2 164 0 1852 98 25 49 chr20 61125625 61125910 -5542095 - AluSx SINE Alu -34 278 1 2037 217 67 57 chr20 61125910 61126307 -5541698 - MER63C DNA MER1_type -406 654 244 289 188 10 94 chr20 61126243 61126339 -5541666 + MER63 DNA MER1_type 435 522 -539 * 407 286 35 35 chr20 61126447 61126618 -5541387 - MER63 DNA MER1_type -888 173 3 244 219 16 0 chr20 61127266 61127330 -5540675 - MER81 DNA DNA 0 114 50 1870 202 119 0 chr20 61127335 61127771 -5540234 - MLT1D LTR MaLR 0 505 18 276 139 0 0 chr20 61127782 61127825 -5540180 - MER81 DNA DNA -70 44 2 251 303 61 0 chr20 61127996 61128095 -5539910 + MIR SINE MIR 77 181 -81 1195 175 56 27 chr20 61128528 61128837 -5539168 + L1MB3 LINE L1 5822 6143 -40 481 200 36 9 chr20 61128917 61129027 -5538978 - MER81 DNA DNA 0 114 2 250 311 17 34 chr20 61129084 61129203 -5538802 - MER5B DNA MER1_type 0 178 62 2233 77 6 55 chr20 61129234 61129546 -5538459 + AluSc SINE Alu 1 297 -12 2139 102 39 0 chr20 61130639 61130924 -5537081 - AluSx SINE Alu -16 296 1 289 326 35 23 chr20 61131082 61131254 -5536751 - MER5B DNA MER1_type 0 178 5 227 50 0 75 chr20 61131317 61131357 -5536648 - L1ME3A LINE L1 -220 5950 5914 530 228 38 71 chr20 61131416 61131600 -5536405 - MER58C DNA MER1_type 0 215 38 406 254 113 0 chr20 61131621 61131763 -5536242 - L1ME3A LINE L1 -337 5833 5676 21 0 0 0 chr20 61132036 61132057 -5535948 + AT_rich Low_complexity Low_complexity 1 21 0 1939 213 90 68 chr20 61133395 61133931 -5534074 + MLT1E3 LTR MaLR 6 558 -66 2364 100 0 0 chr20 61133931 61134242 -5533763 - AluSx SINE Alu -1 311 1 1939 213 90 68 chr20 61134242 61134305 -5533700 + MLT1E3 LTR MaLR 558 618 -6 198 0 0 0 chr20 61134306 61134328 -5533677 + (A)n Simple_repeat Simple_repeat 1 22 0 25 0 0 0 chr20 61134363 61134388 -5533617 + AT_rich Low_complexity Low_complexity 1 25 0 200 170 38 19 chr20 61134672 61134725 -5533280 + (CATA)n Simple_repeat Simple_repeat 3 56 0 731 216 66 19 chr20 61134769 61134982 -5533023 - MER58 DNA MER1_type -57 284 62 3666 205 80 40 chr20 61135198 61136237 -5531768 + Tigger6a DNA MER2_type 2 1082 -1 222 259 17 0 chr20 61136242 61136300 -5531705 + (TATATG)n Simple_repeat Simple_repeat 6 64 0 752 241 18 64 chr20 61137173 61137220 -5530785 - MIR SINE MIR -21 241 193 2308 90 10 0 chr20 61137220 61137519 -5530486 + AluSc SINE Alu 1 302 -7 752 241 18 64 chr20 61137519 61137691 -5530314 - MIR SINE MIR -69 193 32 22 0 0 0 chr20 61138736 61138758 -5529247 + AT_rich Low_complexity Low_complexity 1 22 0 13231 188 34 9 chr20 61139066 61141717 -5526288 + Tigger2 DNA MER2_type 2 2718 0 21 0 0 0 chr20 61141994 61142015 -5525990 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr20 61142178 61142200 -5525805 + AT_rich Low_complexity Low_complexity 1 22 0 221 0 0 33 chr20 61142811 61142841 -5525164 + (GAGTG)n Simple_repeat Simple_repeat 3 31 0 21 57 0 0 chr20 61143600 61143635 -5524370 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr20 61143829 61143852 -5524153 + AT_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr20 61144243 61144266 -5523739 + AT_rich Low_complexity Low_complexity 1 23 0 457 102 70 0 chr20 61144266 61144423 -5523582 + (TA)n Simple_repeat Simple_repeat 1 168 0 783 176 74 0 chr20 61144504 61144652 -5523353 - AluJo SINE Alu -20 292 134 1548 216 0 13 chr20 61144652 61144957 -5523048 - AluJo SINE Alu -11 301 1 350 314 87 37 chr20 61144957 61145199 -5522806 - L1MC/D LINE L1 -2260 5548 5295 22 0 0 0 chr20 61145276 61145298 -5522707 + AT_rich Low_complexity Low_complexity 1 22 0 259 212 94 93 chr20 61145941 61146061 -5521944 + MIR SINE MIR 64 182 -63 34 0 0 0 chr20 61146747 61146781 -5521224 + AT_rich Low_complexity Low_complexity 1 34 0 800 156 15 7 chr20 61146814 61146949 -5521056 - AluJo SINE Alu -176 136 1 219 36 0 0 chr20 61147333 61147361 -5520644 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 3495 127 60 2 chr20 61147948 61148548 -5519457 + LTR24C LTR ERV1 1 635 0 2651 13 0 0 chr20 61148634 61148938 -5519067 + L1PA2 LINE L1 5852 6155 0 42 0 0 0 chr20 61148968 61149010 -5518995 + AT_rich Low_complexity Low_complexity 1 42 0 7575 136 17 5 chr20 61149164 61150827 -5517178 + HERVH LTR ERV1 3534 5286 -1805 1370 122 17 38 chr20 61150807 61151044 -5516961 + HERVH LTR ERV1 5588 5819 -1894 * 2429 95 48 13 chr20 61151042 61151421 -5516584 + HERVH LTR ERV1 7322 7713 0 2594 83 106 5 chr20 61151421 61151828 -5516177 + LTR7 LTR ERV1 1 448 -2 2740 192 72 33 chr20 61152430 61152902 -5515103 + MER67C LTR ERV1 14 521 -189 2309 97 0 3 chr20 61152902 61153210 -5514795 + AluY SINE Alu 1 307 -4 2740 192 72 33 chr20 61153210 61153408 -5514597 + MER67C LTR ERV1 521 710 0 22 0 0 0 chr20 61153571 61153593 -5514412 + AT_rich Low_complexity Low_complexity 1 22 0 30 27 0 0 chr20 61153623 61153660 -5514345 + AT_rich Low_complexity Low_complexity 1 37 0 979 125 17 23 chr20 61153846 61154022 -5513983 - MER30 DNA MER1_type -55 175 1 1784 164 24 66 chr20 61154042 61154513 -5513492 + MLT2A2 LTR ERVL 1 455 -99 9555 119 2 4 chr20 61154513 61155869 -5512136 + HERVL-A2 LTR ERVL 4299 5652 -2 1923 163 43 38 chr20 61155871 61156427 -5511578 + MLT2A2 LTR ERVL 1 554 0 23 68 0 0 chr20 61156778 61156822 -5511183 + AT_rich Low_complexity Low_complexity 1 44 0 200 200 0 0 chr20 61156914 61156949 -5511056 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1736 172 6 16 chr20 61157168 61157488 -5510517 + Tigger3(Golem) DNA MER2_type 2 318 -2711 630 221 33 0 chr20 61157500 61157622 -5510383 - Tigger5 DNA MER2_type -2194 129 4 599 278 148 11 chr20 61157855 61158139 -5509866 - L1ME2 LINE L1 -1 6232 5910 1233 202 61 72 chr20 61158147 61158523 -5509482 - LTR8A LTR ERV1 0 727 356 489 167 67 0 chr20 61158523 61158613 -5509392 - LTR8 LTR ERV1 -595 96 1 1293 268 63 6 chr20 61158615 61159092 -5508913 - L1ME2 LINE L1 -330 5903 5400 574 258 64 7 chr20 61159133 61159416 -5508589 - L1ME2 LINE L1 -2764 3451 3153 598 167 42 35 chr20 61159452 61159596 -5508409 - MER51-int LTR ERV1 -3655 4161 4017 764 239 128 0 chr20 61159609 61159914 -5508091 - L1ME2 LINE L1 -3077 3138 2795 1345 167 4 4 chr20 61159933 61160161 -5507844 - MER50 LTR ERV1 -29 705 478 2300 160 64 34 chr20 61160167 61160833 -5507172 - MER50-int LTR ERV1 -804 4076 3434 225 114 136 0 chr20 61160833 61160877 -5507128 + L1PA13 LINE L1 292 341 -6446 2840 175 8 10 chr20 61160893 61161373 -5506632 - MER50-int LTR ERV1 -3399 1481 1003 10170 149 53 31 chr20 61161404 61163214 -5504791 - MER50-int LTR ERV1 -5355 1850 1 1987 175 39 5 chr20 61163216 61163881 -5504124 - MER50 LTR ERV1 -24 710 1 573 346 20 8 chr20 61164303 61164557 -5503448 - L1ME2 LINE L1 -6104 292 36 2068 132 14 0 chr20 61164564 61164860 -5503145 + AluSx SINE Alu 1 300 -12 197 0 71 0 chr20 61166338 61166366 -5501639 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1007 272 50 6 chr20 61166509 61166847 -5501158 + MER113 DNA MER1_type? 160 512 -9 221 226 0 0 chr20 61167348 61167401 -5500604 + (CA)n Simple_repeat Simple_repeat 2 54 0 42 71 0 0 chr20 61168064 61168148 -5499857 + AT_rich Low_complexity Low_complexity 1 84 0 227 103 26 0 chr20 61168176 61168215 -5499790 + (TA)n Simple_repeat Simple_repeat 1 40 0 825 263 0 0 chr20 61168397 61168583 -5499422 + MLT1A1 LTR MaLR 1 186 -179 352 309 133 6 chr20 61169416 61169597 -5498408 - MIR SINE MIR -6 256 53 21 36 0 0 chr20 61170084 61170112 -5497893 + AT_rich Low_complexity Low_complexity 1 28 0 233 378 49 0 chr20 61170638 61170720 -5497285 + L2 LINE L2 3155 3240 -32 879 208 11 0 chr20 61171372 61171550 -5496455 - FRAM SINE Alu -4 172 1 2090 129 0 0 chr20 61171581 61171875 -5496130 - AluSx SINE Alu -18 294 1 343 322 104 20 chr20 61172732 61172934 -5495071 - LTR33 LTR ERVL -299 222 4 1702 236 68 64 chr20 61173291 61173943 -5494062 + MLT1E1 LTR MaLR 1 654 0 24 0 0 0 chr20 61174294 61174318 -5493687 + AT_rich Low_complexity Low_complexity 1 24 0 2574 98 8 16 chr20 61175389 61175765 -5492240 - THE1C LTR MaLR -2 373 1 34 32 0 32 chr20 61175868 61175899 -5492106 + AT_rich Low_complexity Low_complexity 1 31 -30 763 178 0 0 chr20 61175899 61176017 -5491988 - FLAM_C SINE Alu -15 118 1 34 32 0 32 chr20 61176017 61176048 -5491957 + AT_rich Low_complexity Low_complexity 31 61 0 318 157 59 10 chr20 61176469 61176571 -5491434 + (TA)n Simple_repeat Simple_repeat 2 108 0 1260 216 64 17 chr20 61177372 61177669 -5490336 - AluJb SINE Alu -1 311 1 540 65 0 43 chr20 61178291 61178384 -5489621 + (GAAAA)n Simple_repeat Simple_repeat 1 89 0 7262 50 0 2 chr20 61178518 61179749 -5488256 - L1PA5 LINE L1 -1 6153 4924 8353 52 0 0 chr20 61179750 61180810 -5487195 + L1PA5 LINE L1 3845 4904 -1242 407 283 60 105 chr20 61181439 61181754 -5486251 + L1MC3 LINE L1 254 554 -5491 2101 295 80 22 chr20 61181858 61183842 -5484163 + L1MC3 LINE L1 546 2847 -3898 8612 227 80 20 chr20 61183853 61184143 -5483862 + L1MC3 LINE L1 5547 5818 -2385 1466 143 100 8 chr20 61184143 61184472 -5483533 + AluSx SINE Alu 1 353 0 8612 227 80 20 chr20 61184472 61186686 -5481319 + L1MC3 LINE L1 5818 8202 -1 24 0 0 0 chr20 61187323 61187347 -5480658 + AT_rich Low_complexity Low_complexity 1 24 0 6073 202 178 16 chr20 61190001 61191511 -5476494 - MER52A LTR ERV1 0 1755 1 2949 104 22 4 chr20 61191524 61191974 -5476031 + L1PA13 LINE L1 5705 6162 -1 244 326 70 43 chr20 61192655 61192885 -5475120 + MIR SINE MIR 13 248 -14 1239 317 99 25 chr20 61192894 61193638 -5474367 - L1MEc LINE L1 -5556 840 42 22 0 0 0 chr20 61193836 61193858 -5474147 + AT_rich Low_complexity Low_complexity 1 22 0 804 288 106 27 chr20 61194731 61195137 -5472868 + LTR16A LTR ERVL 13 450 0 254 356 145 34 chr20 61195630 61196273 -5471732 + L2 LINE L2 1982 2695 -619 240 35 0 0 chr20 61196353 61196382 -5471623 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 6299 252 60 20 chr20 61196493 61198118 -5469887 + L1MA4A LINE L1 1 1690 -5159 4264 218 44 40 chr20 61198138 61198255 -5469750 + L1MA4A LINE L1 1783 1898 -4950 1519 183 37 0 chr20 61198255 61198528 -5469477 + AluSx SINE Alu 25 307 -5 4264 218 44 40 chr20 61198528 61200244 -5467761 + L1MA4A LINE L1 1898 3607 -3241 2242 162 67 0 chr20 61200244 61200438 -5467567 + MSTA LTR MaLR 1 181 -247 186 43 0 0 chr20 61200438 61200461 -5467544 + (TCCC)n Simple_repeat Simple_repeat 3 25 0 2242 162 67 0 chr20 61200461 61200667 -5467338 + MSTA LTR MaLR 181 428 0 7441 202 47 9 chr20 61200668 61202259 -5465746 + MSTA-int LTR MaLR 2 1651 0 2515 154 21 5 chr20 61202259 61202680 -5465325 + MSTA LTR MaLR 1 428 0 4264 218 44 40 chr20 61202680 61203077 -5464928 + L1MA4A LINE L1 3606 4028 -2820 3734 143 14 60 chr20 61203056 61203193 -5464812 + L1PA16 LINE L1 6178 6320 -548 * 243 0 0 0 chr20 61203193 61203220 -5464785 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 3734 143 14 60 chr20 61203220 61203239 -5464766 + L1PA16 LINE L1 6320 6338 -530 1862 109 41 0 chr20 61203239 61203506 -5464499 - AluSp SINE Alu -25 288 11 3734 143 14 60 chr20 61203506 61204050 -5463955 + L1PA16 LINE L1 6338 6847 -21 5491 196 27 25 chr20 61204069 61204277 -5463728 + L1MA4A LINE L1 4001 4207 -2641 1425 206 35 3 chr20 61204277 61204564 -5463441 + AluJb SINE Alu 1 296 -16 5491 196 27 25 chr20 61204564 61205597 -5462408 + L1MA4A LINE L1 4207 5245 -1603 1895 332 28 16 chr20 61205604 61206353 -5461652 + L1PA13 LINE L1 1 758 -6029 1347 162 24 4 chr20 61206362 61206609 -5461396 + L1PA15 LINE L1 5910 6161 -4 3861 188 11 7 chr20 61206661 61207958 -5460047 + L1MA4A LINE L1 5234 6538 -467 559 296 71 50 chr20 61208368 61208608 -5459397 + MER45C DNA AcHobo 88 332 -621 1061 83 70 0 chr20 61208608 61208764 -5459241 - L1MA2 LINE L1 -246 6058 5892 252 171 200 14 chr20 61208764 61208834 -5459171 - MSTC LTR MaLR -345 83 1 810 188 13 2 chr20 61208834 61209000 -5459005 + L1P2 LINE L1 5367 5531 -623 23 33 0 0 chr20 61209058 61209088 -5458917 + AT_rich Low_complexity Low_complexity 1 30 0 29 47 0 0 chr20 61209279 61209322 -5458683 + AT_rich Low_complexity Low_complexity 1 43 0 538 215 24 77 chr20 61209642 61209852 -5458153 + MLT1H1 LTR MaLR 356 548 -1 314 322 63 54 chr20 61210623 61210940 -5457065 + HAL1b LINE L1 113 432 -916 2207 90 0 27 chr20 61210941 61211242 -5456763 - AluSp SINE Alu -16 297 5 37 86 0 0 chr20 61213460 61213553 -5454452 + AT_rich Low_complexity Low_complexity 1 93 0 276 366 45 0 chr20 61214183 61214295 -5453710 - L2 LINE L2 -1 3312 3196 757 265 76 17 chr20 61214298 61214536 -5453469 + MIR SINE MIR 1 252 -10 190 250 0 21 chr20 61214654 61214702 -5453303 - L2 LINE L2 -341 2973 2927 2094 132 36 33 chr20 61215040 61215403 -5452602 - THE1B LTR MaLR 0 364 1 23 0 0 0 chr20 61215577 61215600 -5452405 + AT_rich Low_complexity Low_complexity 1 23 0 233 381 32 16 chr20 61216053 61216179 -5451826 + MIR SINE MIR 15 142 -120 198 222 0 22 chr20 61216193 61216238 -5451767 + L2 LINE L2 3213 3256 -16 26 30 0 0 chr20 61216747 61216780 -5451225 + AT_rich Low_complexity Low_complexity 1 33 0 6772 64 18 7 chr20 61216931 61217950 -5450055 - L1PA7 LINE L1 -11 6143 5118 535 15 0 0 chr20 61217951 61218019 -5449986 + L1PA3 LINE L1 6088 6155 0 500 116 42 0 chr20 61218948 61219043 -5448962 - L1MA9 LINE L1 0 6312 6214 195 42 0 0 chr20 61219089 61219113 -5448892 + (CA)n Simple_repeat Simple_repeat 2 25 0 497 292 31 21 chr20 61220380 61220572 -5447433 - MIR SINE MIR -32 230 37 24 53 0 0 chr20 61222211 61222249 -5445756 + AT_rich Low_complexity Low_complexity 1 38 0 195 409 24 16 chr20 61223476 61223603 -5444402 - L2 LINE L2 -218 3054 2927 463 56 14 14 chr20 61223633 61223705 -5444300 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 27 0 0 0 chr20 61223874 61223901 -5444104 + AT_rich Low_complexity Low_complexity 1 27 0 24 0 0 0 chr20 61224825 61224849 -5443156 + AT_rich Low_complexity Low_complexity 1 24 0 25 0 0 0 chr20 61225694 61225719 -5442286 + AT_rich Low_complexity Low_complexity 1 25 0 1293 201 76 40 chr20 61225843 61226147 -5441858 + MER61A LTR ERV1 1 315 -28 1220 179 89 29 chr20 61226303 61226583 -5441422 - AluSg SINE Alu 0 310 14 5385 59 6 0 chr20 61226628 61227301 -5440704 - L1PA4 LINE L1 -6 6149 5473 15499 112 10 20 chr20 61227403 61229809 -5438196 + HERVH LTR ERV1 384 2764 -4949 1501 192 184 3 chr20 61279843 61280223 -5387782 - MER66A LTR ERV1 -3 475 27 258 324 127 6 chr20 61280914 61281087 -5386918 - L1MC5 LINE L1 -67 7894 7701 2284 196 28 26 chr20 61281254 61281683 -5386322 - LOR1b LTR ERV1 -1 460 28 2383 79 0 10 chr20 61281683 61281987 -5386018 + AluY SINE Alu 1 301 -10 2284 196 28 26 chr20 61281987 61282016 -5385989 - LOR1b LTR ERV1 -433 28 1 1705 177 6 25 chr20 61282091 61282408 -5385597 - AluJb SINE Alu -1 311 1 824 248 63 83 chr20 61282751 61283259 -5384746 - L1MC5 LINE L1 -732 7229 6732 4086 172 55 18 chr20 61285037 61285525 -5382480 + L1MA9 LINE L1 5455 5987 -325 2319 71 7 7 chr20 61285525 61285819 -5382186 + AluSc SINE Alu 1 294 -15 4086 172 55 18 chr20 61285819 61286154 -5381851 + L1MA9 LINE L1 5987 6308 -4 1841 126 44 27 chr20 61286170 61286293 -5381712 + AluSq SINE Alu 1 120 -193 2224 107 0 0 chr20 61286293 61286591 -5381414 + AluY SINE Alu 1 298 -13 1841 126 44 27 chr20 61286591 61286761 -5381244 + AluSq SINE Alu 120 299 -14 225 154 0 0 chr20 61286762 61286801 -5381204 + GA-rich Low_complexity Low_complexity 1 39 0 2010 146 7 10 chr20 61286803 61287105 -5380900 + AluSx SINE Alu 1 301 -11 7249 243 38 14 chr20 61287105 61288225 -5379780 + L1ME1 LINE L1 2175 3267 -3159 2280 104 10 0 chr20 61288225 61288533 -5379472 + AluY SINE Alu 1 311 0 7249 243 38 14 chr20 61288533 61289887 -5378118 + L1ME1 LINE L1 3267 4709 -1717 1000 191 34 1 chr20 61290086 61290298 -5377707 - L1M3c LINE L1 -4516 1841 1256 312 257 69 81 chr20 61290331 61290592 -5377413 + L1MC5 LINE L1 7637 7894 -67 252 242 0 0 chr20 61292048 61292110 -5375895 - Charlie1 DNA MER1_type -20 2741 2680 260 233 35 35 chr20 61292147 61292263 -5375742 - Charlie1 DNA MER1_type -66 2695 2580 284 246 29 0 chr20 61292263 61292332 -5375673 + L1ME1 LINE L1 5816 5886 -2179 609 196 75 95 chr20 61292411 61292435 -5375570 + L1ME1 LINE L1 5899 5922 -524 4374 130 49 68 chr20 61292435 61293235 -5374770 + LTR1 LTR ERV1 1 785 0 609 196 75 95 chr20 61293235 61293473 -5374532 + L1ME1 LINE L1 5922 6148 -298 271 238 42 67 chr20 61293470 61293663 -5374342 + L1MC1 LINE L1 5257 5444 -2364 * 272 252 47 19 chr20 61293632 61293739 -5374266 + L1MC1 LINE L1 2933 3042 -3104 * 4732 206 59 22 chr20 61293736 61294788 -5373217 + L1MC1 LINE L1 3775 4787 -1546 2372 85 0 3 chr20 61294788 61295082 -5372923 - AluSq SINE Alu -20 293 1 4732 206 59 22 chr20 61295082 61296123 -5371882 + L1MC1 LINE L1 4787 5957 -376 366 293 0 0 chr20 61296123 61296255 -5371750 + L1M4 LINE L1 4965 5096 -1050 2000 150 71 6 chr20 61296284 61296637 -5371368 + L1MC1 LINE L1 5958 6333 0 27 0 0 0 chr20 61296735 61296762 -5371243 + AT_rich Low_complexity Low_complexity 1 27 0 43965 31 22 1 chr20 61296764 61302790 -5365215 - L1PA3 LINE L1 0 6155 2 1658 182 3 10 chr20 61302827 61303118 -5364887 + AluJb SINE Alu 1 289 -23 14732 201 44 23 chr20 61303238 61306775 -5361230 - L1MEc LINE L1 -1112 5216 1755 345 47 0 0 chr20 61306775 61306818 -5361187 + (TTTCC)n Simple_repeat Simple_repeat 2 44 0 14732 201 44 23 chr20 61306818 61307241 -5360764 - L1MEc LINE L1 -4573 1755 1342 2387 93 0 10 chr20 61307241 61307553 -5360452 - AluY SINE Alu -2 309 1 14732 201 44 23 chr20 61307553 61308091 -5359914 - L1MEc LINE L1 -4986 1342 817 2167 84 31 0 chr20 61308091 61308377 -5359628 + AluY SINE Alu 1 295 -16 14732 201 44 23 chr20 61308377 61308405 -5359600 - L1MEc LINE L1 -5511 817 791 1211 184 173 71 chr20 61308405 61308855 -5359150 + LTR54B LTR ERV1 1 496 -2 14732 201 44 23 chr20 61308855 61309337 -5358668 - L1MEc LINE L1 -5537 791 699 818 288 76 61 chr20 61309439 61310060 -5357945 - L1M4c LINE L1 -4438 2125 1347 654 238 70 71 chr20 61310180 61310608 -5357397 + L1MEc LINE L1 2178 2562 -3653 1486 219 95 40 chr20 61311424 61311898 -5356107 - MLT1D LTR MaLR -5 500 1 2552 281 42 21 chr20 61312175 61312947 -5355058 + L1PA15 LINE L1 1 788 -5999 9917 176 29 12 chr20 61313032 61313357 -5354648 + L1PA15 LINE L1 3811 4129 -2687 2030 102 0 41 chr20 61313357 61313650 -5354355 + AluSx SINE Alu 32 312 0 9917 176 29 12 chr20 61313650 61316279 -5351726 + L1PA15 LINE L1 4129 6814 -2 1525 92 0 29 chr20 61316356 61316563 -5351442 - AluSg/x SINE Alu -10 300 100 1814 203 70 32 chr20 61316563 61317006 -5350999 - LTR2B LTR ERV1 0 490 31 35953 75 4 7 chr20 61317025 61321583 -5346422 - Harlequin LTR ERV1 -3 6893 2349 928 131 0 7 chr20 61321562 61321715 -5346290 - Harlequin LTR ERV1 -4938 1958 1807 * 278 267 163 23 chr20 61321727 61321813 -5346192 + LTR8 LTR ERV1 156 253 -438 2349 66 19 3 chr20 61321813 61322130 -5345875 - HERVE LTR ERV1 -5174 1722 1401 * 5341 75 60 40 chr20 61322110 61322909 -5345096 - HERVE LTR ERV1 -5819 1077 263 802 105 13 72 chr20 61322889 61323041 -5344964 - HERVE LTR ERV1 -7416 397 255 * 2726 95 8 13 chr20 61323025 61323414 -5344591 - HERVE LTR ERV1 -6509 387 1 2023 178 93 32 chr20 61323414 61323876 -5344129 - LTR2B LTR ERV1 0 490 1 788 128 0 0 chr20 61323876 61323978 -5344027 - AluSc SINE Alu -206 103 2 543 267 58 72 chr20 61324105 61324464 -5343541 + MER115 DNA AcHobo 321 674 -19 976 157 34 6 chr20 61325245 61325423 -5342582 + MER53 DNA DNA 7 189 0 493 298 21 0 chr20 61326505 61326646 -5341359 - MIR SINE MIR -114 148 5 236 176 20 0 chr20 61326699 61326750 -5341255 - MER117 DNA MER1_type -55 142 91 323 252 55 24 chr20 61326822 61326949 -5341056 - LTR67 LTR ERVL -1 556 426 957 174 82 0 chr20 61327168 61327375 -5340630 + L1MB4 LINE L1 5954 6177 -3 3820 172 53 14 chr20 61327386 61328123 -5339882 + L1MB3 LINE L1 5418 6183 0 1121 215 99 57 chr20 61328580 61328985 -5339020 + LTR37A LTR ERV1 5 426 0 401 79 40 40 chr20 61329610 61329711 -5338294 + (CAGAGA)n Simple_repeat Simple_repeat 2 102 0 806 106 21 52 chr20 61329729 61330315 -5337690 + (CAGAGA)n Simple_repeat Simple_repeat 1 567 0 408 235 17 59 chr20 61330331 61330699 -5337306 + (CAGAGA)n Simple_repeat Simple_repeat 1 352 0 224 250 22 52 chr20 61330716 61330852 -5337153 + (CAGAGA)n Simple_repeat Simple_repeat 4 135 0 305 306 18 9 chr20 61331131 61331242 -5336763 + MER94 DNA DNA 17 128 -6 920 175 169 0 chr20 61331895 61332084 -5335921 + MER58A DNA MER1_type 1 221 -3 371 186 53 53 chr20 61332718 61332831 -5335174 - L2 LINE L2 -3 3269 3157 517 192 0 16 chr20 61332880 61333062 -5334943 + (TG)n Simple_repeat Simple_repeat 1 179 0 344 222 56 0 chr20 61333518 61333590 -5334415 - MER94 DNA DNA -1 133 58 263 319 7 14 chr20 61334300 61334441 -5333564 + GA-rich Low_complexity Low_complexity 1 140 0 689 126 38 14 chr20 61334441 61334655 -5333350 + (TGGA)n Simple_repeat Simple_repeat 1 219 0 1976 179 29 5 chr20 61334998 61335377 -5332628 - L1MB7 LINE L1 -16 6168 5781 1629 162 42 33 chr20 61335380 61335579 -5332426 - MER2 DNA MER2_type -4 341 136 1402 124 64 9 chr20 61335579 61335797 -5332208 - MER30 DNA MER1_type 0 230 1 1629 162 42 33 chr20 61335797 61335930 -5332075 - MER2 DNA MER2_type -209 136 6 1248 184 0 0 chr20 61335951 61336168 -5331837 - L1MB7 LINE L1 -415 5763 5547 1320 190 55 14 chr20 61337579 61337869 -5330136 - AluJo SINE Alu 0 312 11 24 0 0 0 chr20 61337875 61337899 -5330106 + AT_rich Low_complexity Low_complexity 1 24 0 728 223 7 0 chr20 61337899 61338038 -5329967 - L1MB5 LINE L1 -9 6165 6026 247 305 74 21 chr20 61338059 61338154 -5329851 - L2 LINE L2 -5 3267 3168 282 303 50 0 chr20 61338244 61338343 -5329662 - MER117 DNA MER1_type -6 191 88 580 240 33 13 chr20 61338693 61338843 -5329162 - MER45A DNA AcHobo 0 178 26 306 298 57 16 chr20 61339228 61339352 -5328653 + MLT1K LTR MaLR 449 577 -11 387 368 108 5 chr20 61339738 61339961 -5328044 + MIR SINE MIR 15 260 -2 527 287 184 35 chr20 61340340 61340741 -5327264 - MLT1K LTR MaLR -88 500 40 457 305 51 11 chr20 61341052 61341229 -5326776 + MIR SINE MIR 38 221 -41 242 296 136 0 chr20 61341259 61341347 -5326658 + MIR SINE MIR 124 223 -39 231 250 0 26 chr20 61342109 61342185 -5325820 - MIR3 SINE MIR -54 154 81 212 219 47 0 chr20 61342415 61342479 -5325526 + C-rich Low_complexity Low_complexity 3 69 0 331 240 72 32 chr20 61342844 61342969 -5325036 + MIR SINE MIR 16 145 -117 522 213 75 44 chr20 61343555 61343715 -5324290 + MER20 DNA MER1_type 55 219 0 213 324 14 0 chr20 61344356 61344427 -5323578 - L2 LINE L2 -10 3303 3232 2262 84 0 0 chr20 61346586 61346883 -5321122 + AluY SINE Alu 1 297 -14 182 250 0 21 chr20 61346885 61346933 -5321072 + L2 LINE L2 3267 3313 0 600 309 138 28 chr20 61347126 61347969 -5320036 - L1MC4a LINE L1 -104 6017 5071 401 287 9 0 chr20 61347971 61348079 -5319926 - MER81 DNA DNA 0 114 6 269 253 0 6 chr20 61349208 61349366 -5318639 + (TG)n Simple_repeat Simple_repeat 1 157 0 538 290 0 38 chr20 61349386 61349572 -5318433 + (TG)n Simple_repeat Simple_repeat 1 179 0 818 209 14 47 chr20 61349823 61350034 -5317971 - MLT1B LTR MaLR -186 204 1 278 276 87 17 chr20 61350034 61350306 -5317699 - MLT1H LTR MaLR -249 346 17 987 187 35 0 chr20 61350323 61350521 -5317484 + MER68 LTR ERV1 358 562 0 360 198 115 10 chr20 61351801 61351897 -5316108 - MIR SINE MIR -117 145 40 232 243 66 67 chr20 61352285 61352468 -5315537 + MIR3 SINE MIR 11 192 -70 1308 217 120 65 chr20 61352473 61352719 -5315286 - MLT1E2 LTR MaLR -11 615 384 333 68 0 0 chr20 61352719 61352763 -5315242 + (CTGGGG)n Simple_repeat Simple_repeat 6 49 0 1308 217 120 65 chr20 61352763 61353073 -5314932 - MLT1E2 LTR MaLR -242 384 26 367 370 33 18 chr20 61353268 61353541 -5314464 + L2 LINE L2 2502 2778 -536 199 292 0 45 chr20 61353682 61353771 -5314234 + L2 LINE L2 3187 3271 -1 205 274 0 0 chr20 61355071 61355122 -5312883 + (TG)n Simple_repeat Simple_repeat 1 51 0 305 237 193 11 chr20 61355222 61355485 -5312520 - L1MC/D LINE L1 -354 5810 5488 1200 203 38 8 chr20 61355638 61355904 -5312101 - MLT1A1 LTR MaLR 0 365 92 529 259 51 56 chr20 61355918 61356115 -5311890 - MER3 DNA MER1_type 0 209 14 191 130 0 109 chr20 61356445 61356491 -5311514 - MIR SINE MIR -70 138 98 284 313 9 52 chr20 61357140 61357255 -5310750 + L2 LINE L2 2911 3020 -293 1126 190 13 13 chr20 61357262 61357494 -5310511 - L1MC1 LINE L1 0 6333 6102 4725 197 45 17 chr20 61357547 61359483 -5308522 - L1MC1 LINE L1 -238 6095 4097 3531 246 7 43 chr20 61359492 61360168 -5307837 - L1MC1 LINE L1 -2715 3431 2811 1873 90 0 4 chr20 61360168 61360423 -5307582 + AluSg SINE Alu 2 255 -55 3531 246 7 43 chr20 61360423 61360873 -5307132 - L1MC1 LINE L1 -3335 2811 2346 836 245 40 26 chr20 61360890 61361114 -5306891 - L1ME3A LINE L1 0 6170 5940 1784 159 10 25 chr20 61361114 61361428 -5306577 - AluSx SINE Alu -3 309 1 836 245 40 26 chr20 61361428 61361476 -5306529 - L1ME3A LINE L1 -230 5940 5894 262 167 182 30 chr20 61361749 61361815 -5306190 + L2 LINE L2 3221 3296 -17 221 328 0 0 chr20 61361977 61362038 -5305967 + L2 LINE L2 3209 3269 -3 229 294 151 16 chr20 61362161 61362287 -5305718 + MIR SINE MIR 99 241 -21 599 277 76 8 chr20 61362414 61362652 -5305353 + MIR SINE MIR 4 257 -5 209 236 154 73 chr20 61364206 61364316 -5303689 - L2 LINE L2 0 3313 3195 252 0 0 0 chr20 61364672 61364700 -5303305 + (CAAAA)n Simple_repeat Simple_repeat 2 29 0 597 340 142 14 chr20 61364700 61365428 -5302577 + L2 LINE L2 2450 3272 0 1848 182 59 35 chr20 61365942 61366403 -5301602 - L1MB7 LINE L1 0 6184 5713 466 248 131 10 chr20 61366970 61367168 -5300837 - MER113 DNA MER1_type? -27 494 273 1017 171 29 0 chr20 61367272 61367442 -5300563 + FAM SINE Alu 1 175 0 354 269 89 11 chr20 61367873 61368054 -5299951 + MIR SINE MIR 37 228 -34 291 244 58 23 chr20 61368258 61368344 -5299661 + L2 LINE L2 3225 3313 0 23 0 0 0 chr20 61369039 61369062 -5298943 + GC_rich Low_complexity Low_complexity 1 23 0 228 86 0 0 chr20 61369864 61369899 -5298106 + (T)n Simple_repeat Simple_repeat 1 35 0 21 0 0 0 chr20 61369980 61370001 -5298004 + GC_rich Low_complexity Low_complexity 1 21 0 320 294 82 57 chr20 61372316 61372510 -5295495 - L3 LINE CR1 -412 1165 967 687 281 103 47 chr20 61372819 61373233 -5294772 - L1ME3A LINE L1 -368 5753 5339 348 380 45 0 chr20 61373795 61373995 -5294010 + L2 LINE L2 3102 3310 -3 249 33 0 0 chr20 61374457 61374487 -5293518 + (CCCCCA)n Simple_repeat Simple_repeat 5 34 0 1655 176 3 3 chr20 61374959 61375254 -5292751 + AluJb SINE Alu 1 295 -17 938 181 62 5 chr20 61375506 61375699 -5292306 - MER3 DNA MER1_type -5 204 1 366 293 26 0 chr20 61375701 61375817 -5292188 + L2 LINE L2 3192 3310 -3 489 296 31 0 chr20 61376056 61376215 -5291790 + MIR SINE MIR 31 194 -68 313 222 0 133 chr20 61377292 61377347 -5290658 - Charlie8 DNA MER1_type -131 210 149 1854 105 6 84 chr20 61377347 61377670 -5290335 - AluSg SINE Alu -12 298 1 313 222 0 133 chr20 61377670 61377723 -5290282 - Charlie8 DNA MER1_type -192 149 121 2699 125 54 10 chr20 61377723 61378130 -5289875 - MSTB LTR MaLR 0 426 2 313 222 0 133 chr20 61378130 61378155 -5289850 - Charlie8 DNA MER1_type -220 121 94 443 267 154 50 chr20 61378158 61378525 -5289480 - MLT1J LTR MaLR -2 509 83 186 43 0 0 chr20 61378525 61378548 -5289457 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 443 267 154 50 chr20 61378548 61378641 -5289364 - MLT1J LTR MaLR -428 83 1 181 225 38 100 chr20 61379026 61379106 -5288899 - MIR SINE MIR -148 114 40 281 286 56 28 chr20 61380037 61380215 -5287790 - MER113 DNA MER1_type? -308 213 31 477 214 191 12 chr20 61380727 61380895 -5287110 - MLT1H LTR MaLR -340 209 12 572 215 133 56 chr20 61381036 61381231 -5286774 + MIR SINE MIR 28 237 -25 201 325 26 0 chr20 61382097 61382174 -5285831 + L2 LINE L2 3225 3303 -10 185 207 0 17 chr20 61382761 61382819 -5285186 + CT-rich Low_complexity Low_complexity 1 57 0 183 100 0 0 chr20 61383308 61383338 -5284667 + (TG)n Simple_repeat Simple_repeat 1 30 0 213 94 0 0 chr20 61383570 61383602 -5284403 + (GGGAA)n Simple_repeat Simple_repeat 2 33 0 1172 250 61 16 chr20 61384113 61384551 -5283454 + MLT1E3 LTR MaLR 53 504 -120 1062 172 27 0 chr20 61384537 61384723 -5283282 + MLT1E3 LTR MaLR 433 623 -1 * 243 259 137 23 chr20 61384726 61384857 -5283148 - MIR SINE MIR -97 165 20 180 138 0 0 chr20 61384866 61384895 -5283110 + MIR SINE MIR 116 144 -118 2418 268 102 19 chr20 61385171 61386116 -5281889 - L1MC4a LINE L1 0 7808 6786 222 283 0 0 chr20 61387027 61387119 -5280886 + (TG)n Simple_repeat Simple_repeat 1 92 0 251 311 37 43 chr20 61387241 61387402 -5280603 + MIR SINE MIR 33 192 -70 180 0 0 0 chr20 61387968 61387988 -5280017 + (A)n Simple_repeat Simple_repeat 1 20 0 419 222 28 28 chr20 61388260 61388368 -5279637 + MIR SINE MIR 84 191 -71 552 286 25 12 chr20 61389332 61389493 -5278512 - MER5A DNA MER1_type -7 182 20 1441 209 70 3 chr20 61389737 61390095 -5277910 - L1MC3 LINE L1 -3 7782 7401 887 277 67 46 chr20 61391132 61391726 -5276279 - L2 LINE L2 -2 3311 2717 180 264 19 0 chr20 61391748 61391801 -5276204 - L2 LINE L2 -699 2615 2562 279 154 19 19 chr20 61391934 61391986 -5276019 - MER63 DNA MER1_type -328 732 681 394 274 61 18 chr20 61392192 61392356 -5275649 + LTR16C LTR ERVL 319 489 -2 563 226 127 55 chr20 61392360 61392635 -5275370 - L2 LINE L2 -788 2526 2232 224 148 37 12 chr20 61392713 61392794 -5275211 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 221 201 32 26 chr20 61392829 61392983 -5275022 + (TCTA)n Simple_repeat Simple_repeat 3 157 0 277 284 0 14 chr20 61393020 61393094 -5274911 - L3 LINE CR1 -87 1490 1418 280 271 42 62 chr20 61393894 61394038 -5273967 - L1MD3 LINE L1 -90 7905 7765 680 162 15 134 chr20 61394383 61394592 -5273413 - MLT1C LTR MaLR -8 459 199 2252 99 0 0 chr20 61395166 61395469 -5272536 - AluSx SINE Alu -9 303 1 275 246 0 0 chr20 61396286 61396343 -5271662 - MER5A DNA MER1_type -99 90 34 952 285 58 25 chr20 61397325 61397686 -5270319 + MLT1K LTR MaLR 189 561 -27 3562 70 8 33 chr20 61398153 61398639 -5269366 + L1PA8A LINE L1 5655 6128 -3 612 307 92 9 chr20 61399214 61399442 -5268563 + MIR SINE MIR 8 254 -8 406 278 60 8 chr20 61399514 61399647 -5268358 + MER58B DNA MER1_type 202 341 0 921 239 0 24 chr20 61399712 61399925 -5268080 + MER3 DNA MER1_type 2 209 0 1942 141 3 0 chr20 61400049 61400520 -5267485 - AluSq SINE Alu 0 313 1 484 290 134 11 chr20 61401311 61401497 -5266508 - MIR SINE MIR -48 214 6 474 309 70 10 chr20 61401542 61401743 -5266262 + MIR SINE MIR 47 259 -3 497 311 120 18 chr20 61402842 61403067 -5264938 - MIR SINE MIR -14 248 1 236 340 134 0 chr20 61403253 61403350 -5264655 + L2 LINE L2 3160 3269 -3 697 173 13 0 chr20 61403363 61403519 -5264486 + (TGGA)n Simple_repeat Simple_repeat 1 158 0 413 214 17 0 chr20 61403535 61403652 -5264353 + (TGGA)n Simple_repeat Simple_repeat 4 122 0 814 139 25 0 chr20 61403673 61403831 -5264174 + (TGGA)n Simple_repeat Simple_repeat 1 162 0 434 205 17 0 chr20 61403847 61403964 -5264041 + (TGGA)n Simple_repeat Simple_repeat 4 122 0 696 182 17 6 chr20 61403993 61404169 -5263836 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 405 214 0 68 chr20 61404570 61404673 -5263332 + MIR SINE MIR 34 129 -79 255 287 9 52 chr20 61405053 61405168 -5262837 + MIR SINE MIR 1 110 -152 341 313 69 7 chr20 61405493 61405637 -5262368 - Charlie8 DNA MER1_type -2141 276 124 296 236 22 0 chr20 61405955 61406044 -5261961 + (TA)n Simple_repeat Simple_repeat 2 92 0 289 148 37 0 chr20 61406044 61406098 -5261907 - MLT2B1 LTR ERVL 0 515 460 378 217 17 22 chr20 61406108 61406288 -5261717 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 1870 206 119 7 chr20 61406288 61406700 -5261305 - MLT2B1 LTR ERVL -62 458 1 434 255 25 31 chr20 61407305 61407466 -5260539 - L1ME4a LINE L1 0 6121 5962 390 231 58 96 chr20 61407565 61407773 -5260232 - L1ME4a LINE L1 -318 5803 5604 2290 60 3 0 chr20 61407885 61408196 -5259809 - AluY SINE Alu 0 312 1 352 299 15 30 chr20 61409446 61409580 -5258425 + L2 LINE L2 3141 3272 0 1818 178 14 20 chr20 61409849 61410198 -5257807 - L1PA16 LINE L1 -9 6157 5811 189 0 0 0 chr20 61410208 61410229 -5257776 + (T)n Simple_repeat Simple_repeat 1 21 0 303 258 0 0 chr20 61410794 61410860 -5257145 + L2 LINE L2 3248 3313 0 189 265 12 96 chr20 61411754 61411837 -5256168 - L2 LINE L2 -339 2974 2899 2387 108 37 8 chr20 61412038 61412391 -5255614 - THE1B LTR MaLR -1 363 1 330 336 22 12 chr20 61412752 61412925 -5255080 + MIR SINE MIR 36 208 0 268 175 78 87 chr20 61413045 61413148 -5254857 - MLT1K LTR MaLR -18 570 469 316 319 25 8 chr20 61413349 61413468 -5254537 - MLT1K LTR MaLR -455 133 13 395 304 140 12 chr20 61415459 61415709 -5252296 + L1ME LINE L1 5418 5699 -465 189 0 0 0 chr20 61415727 61415748 -5252257 + (A)n Simple_repeat Simple_repeat 1 21 0 812 211 20 0 chr20 61416072 61416219 -5251786 + FRAM SINE Alu 7 156 -20 24 67 0 0 chr20 61416374 61416419 -5251586 + AT_rich Low_complexity Low_complexity 1 45 0 869 289 27 7 chr20 61416458 61416759 -5251246 + L1MC5 LINE L1 5561 5867 -1941 1720 203 55 57 chr20 61416769 61416814 -5251191 - MLT2B1 LTR ERVL -3 517 473 492 18 0 0 chr20 61416814 61416871 -5251134 + (TAGG)n Simple_repeat Simple_repeat 3 59 0 1720 203 55 57 chr20 61416871 61417243 -5250762 - MLT2B1 LTR ERVL -47 473 101 1550 134 3 68 chr20 61417250 61417557 -5250448 + AluJo SINE Alu 9 295 -17 243 152 152 81 chr20 61417584 61417683 -5250322 - L1M4b LINE L1 -5213 1646 1541 283 174 141 54 chr20 61417721 61417813 -5250192 - MLT2B1 LTR ERVL -420 100 1 1431 275 66 43 chr20 61417968 61418173 -5249832 + L1MC5 LINE L1 6053 6252 -1709 2088 114 0 3 chr20 61418173 61418470 -5249535 - AluSg SINE Alu -14 296 1 1431 275 66 43 chr20 61418470 61419409 -5248596 + L1MC5 LINE L1 6252 7233 -728 516 256 35 42 chr20 61419429 61419656 -5248349 + L1MC5 LINE L1 7244 7415 -393 1279 244 143 21 chr20 61419661 61419875 -5248130 - L1ME2 LINE L1 -92 6141 5954 210 71 0 0 chr20 61419875 61419903 -5248102 + (TG)n Simple_repeat Simple_repeat 2 29 0 1279 244 143 21 chr20 61419903 61420247 -5247758 - L1ME2 LINE L1 -279 5954 5497 561 154 0 26 chr20 61420252 61420369 -5247636 - L1MB8 LINE L1 0 6178 6065 4478 238 34 19 chr20 61420369 61422153 -5245852 - L1ME2 LINE L1 -2720 3495 1731 3536 236 44 29 chr20 61422180 61422238 -5245767 - L1M4c LINE L1 -4451 2687 2631 296 24 24 0 chr20 61422238 61422279 -5245726 + (TG)n Simple_repeat Simple_repeat 2 43 0 3536 236 44 29 chr20 61422279 61423915 -5244090 - L1M4c LINE L1 -4507 2631 832 558 333 35 49 chr20 61423920 61424268 -5243737 - L1ME2 LINE L1 -5265 1131 789 2190 103 7 0 chr20 61424357 61424657 -5243348 - AluSc SINE Alu -7 302 1 2406 62 7 0 chr20 61425199 61425503 -5242502 + AluY SINE Alu 1 306 -5 337 312 89 51 chr20 61427080 61427782 -5240223 - L2 LINE L2 0 3272 2556 929 234 130 45 chr20 61427864 61428288 -5239717 - MLT1C LTR MaLR 0 467 8 289 328 16 8 chr20 61428669 61428794 -5239211 + MIR SINE MIR 29 154 -108 379 339 73 33 chr20 61430117 61430391 -5237614 - L1ME LINE L1 -336 5785 5501 792 169 0 0 chr20 61431505 61431683 -5236322 + GA-rich Low_complexity Low_complexity 2 179 0 2093 119 7 0 chr20 61433701 61433857 -5234148 - AluSq SINE Alu -26 287 127 441 0 0 0 chr20 61433857 61433906 -5234099 + (TTTTA)n Simple_repeat Simple_repeat 2 50 0 2093 119 7 0 chr20 61433906 61434034 -5233971 - AluSq SINE Alu -186 127 1 496 281 0 7 chr20 61434055 61434190 -5233815 + MIR SINE MIR 41 174 -88 2139 214 9 0 chr20 61434445 61434888 -5233117 - L1MB7 LINE L1 -9 6175 5729 351 330 8 8 chr20 61434986 61435104 -5232901 - L2 LINE L2 -11 3302 3185 457 225 75 46 chr20 61436456 61436629 -5231376 + Charlie8 DNA MER1_type 3 180 -2237 718 239 11 6 chr20 61437075 61437251 -5230754 + MER20 DNA MER1_type 43 219 0 209 265 184 10 chr20 61437255 61437353 -5230652 + MIR SINE MIR 36 150 -58 357 306 118 0 chr20 61437466 61437636 -5230369 + MIR SINE MIR 50 239 -23 275 330 68 15 chr20 61437798 61438004 -5230001 - L2 LINE L2 -608 2706 2490 239 258 56 45 chr20 61438224 61438313 -5229692 + MIR SINE MIR 103 192 -70 227 273 0 0 chr20 61438811 61438866 -5229139 + MIR SINE MIR 82 136 -72 437 234 5 37 chr20 61439346 61440106 -5227899 + CT-rich Low_complexity Low_complexity 1 735 0 440 232 0 20 chr20 61440106 61440205 -5227800 + C-rich Low_complexity Low_complexity 3 99 0 976 173 30 0 chr20 61440603 61440800 -5227205 + MER20 DNA MER1_type 17 219 0 762 160 48 53 chr20 61443841 61444029 -5223976 - MER5A DNA MER1_type 0 189 3 2098 148 39 25 chr20 61444577 61444936 -5223069 - THE1B LTR MaLR 0 364 1 330 348 0 14 chr20 61444966 61445107 -5222898 + CT-rich Low_complexity Low_complexity 2 140 0 866 164 20 7 chr20 61445159 61445311 -5222694 - LTR32 LTR ERVL 0 471 318 279 109 65 0 chr20 61445316 61445362 -5222643 - LTR32 LTR ERVL -106 365 317 1798 157 26 46 chr20 61445418 61445549 -5222456 - LTR32 LTR ERVL -119 352 220 1589 93 75 0 chr20 61445549 61445763 -5222242 - MER30 DNA MER1_type 0 230 1 1798 157 26 46 chr20 61445763 61445976 -5222029 - LTR32 LTR ERVL -251 220 15 654 199 108 6 chr20 61446038 61446204 -5221801 + MER58A DNA MER1_type 34 216 -8 437 313 109 33 chr20 61446391 61446695 -5221310 + L3 LINE CR1 553 879 -698 2344 112 3 0 chr20 61446715 61447027 -5220978 + AluSp SINE Alu 1 313 0 2395 109 0 0 chr20 61447044 61447355 -5220650 + AluSx SINE Alu 1 311 -1 1240 258 133 42 chr20 61447407 61448370 -5219635 - L2 LINE L2 -36 3277 2223 770 288 45 25 chr20 61448418 61448776 -5219229 + MER113 DNA MER1_type? 54 418 -103 271 277 31 67 chr20 61449149 61449344 -5218661 - HAL1 LINE L1 -1519 988 801 567 265 152 28 chr20 61450326 61450537 -5217468 + MIR SINE MIR 6 242 -20 465 320 46 15 chr20 61450582 61450779 -5217226 + L2 LINE L2 2871 3073 -240 747 274 20 36 chr20 61451203 61451451 -5216554 + MIR SINE MIR 8 251 -11 1106 109 0 16 chr20 61451486 61451654 -5216351 + (ATGGTG)n Simple_repeat Simple_repeat 1 345 0 1106 109 0 16 chr20 61451654 61451837 -5216168 + (ATGGTG)n Simple_repeat Simple_repeat 1 180 0 881 161 0 12 chr20 61451852 61452101 -5215904 + (ATGGTG)n Simple_repeat Simple_repeat 1 246 0 750 207 0 0 chr20 61452129 61452308 -5215697 + (ATGGTG)n Simple_repeat Simple_repeat 1 179 0 181 303 118 0 chr20 61452588 61452664 -5215341 - MER5C DNA MER1_type -1 323 239 854 287 53 12 chr20 61452838 61453252 -5214753 - MER113 DNA MER1_type? -61 460 30 197 116 23 70 chr20 61454615 61454658 -5213347 - MIR3 SINE MIR -51 157 117 312 327 65 34 chr20 61454722 61455043 -5212962 + L2 LINE L2 2430 2760 -554 201 39 0 0 chr20 61455079 61455105 -5212900 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 229 257 43 141 chr20 61455250 61455526 -5212479 + L2 LINE L2 2986 3234 -38 338 359 39 25 chr20 61455836 61456120 -5211885 - MER90 LTR ERV1 -7 568 281 342 314 50 19 chr20 61456263 61456642 -5211363 - L1M4 LINE L1 -1113 5033 4643 283 275 99 0 chr20 61457514 61457605 -5210400 - MIR SINE MIR -6 256 157 498 286 120 0 chr20 61457712 61457904 -5210101 + MIR SINE MIR 34 248 -14 469 266 24 0 chr20 61458037 61458168 -5209837 + MIR SINE MIR 59 192 -61 1124 247 129 5 chr20 61458590 61459041 -5208964 - MLT1H LTR MaLR 0 567 13 278 352 68 11 chr20 61459317 61459405 -5208600 + L2 LINE L2 3128 3220 -52 203 293 9 19 chr20 61459422 61459528 -5208477 + GA-rich Low_complexity Low_complexity 3 107 0 332 260 171 0 chr20 61459593 61459716 -5208289 + MIR SINE MIR 76 219 -43 241 284 50 60 chr20 61460039 61460180 -5207825 - L1ME4a LINE L1 -75 6046 5906 2125 126 163 19 chr20 61460180 61460554 -5207451 + MSTA LTR MaLR 1 428 0 241 284 50 60 chr20 61460554 61460613 -5207392 - L1ME4a LINE L1 -215 5906 5848 211 197 17 197 chr20 61460646 61460721 -5207284 + MIR SINE MIR 103 151 -111 2074 145 0 0 chr20 61460721 61461017 -5206988 - AluSx SINE Alu -14 298 3 211 197 17 197 chr20 61461017 61461058 -5206947 + MIR SINE MIR 151 198 -64 257 306 82 0 chr20 61462054 61462152 -5205853 - MIR SINE MIR -54 208 103 283 296 34 11 chr20 61462463 61462551 -5205454 + MIR SINE MIR 34 123 -85 346 161 0 0 chr20 61462739 61462795 -5205210 + MSTA LTR MaLR 373 428 0 447 268 166 54 chr20 61462853 61463166 -5204839 + L1ME3 LINE L1 5482 5829 -333 222 270 0 0 chr20 61463284 61463347 -5204658 + GA-rich Low_complexity Low_complexity 1 63 0 2204 122 7 0 chr20 61464668 61464971 -5203034 + AluSc SINE Alu 1 305 -4 329 349 60 21 chr20 61465102 61465437 -5202568 - L1MC4a LINE L1 -1878 5930 5583 241 291 8 43 chr20 61465637 61465754 -5202251 + L1MC5 LINE L1 7786 7898 -63 1813 178 6 13 chr20 61465764 61466078 -5201927 - AluJb SINE Alu 0 312 1 310 281 0 34 chr20 61466241 61466330 -5201675 - MIR SINE MIR -76 186 101 2953 156 71 2 chr20 61466547 61467136 -5200869 - L1MC2 LINE L1 0 6344 5715 633 307 128 49 chr20 61467230 61467699 -5200306 + L2 LINE L2 2808 3313 0 219 36 0 0 chr20 61468677 61468705 -5199300 + (TG)n Simple_repeat Simple_repeat 2 29 0 200 333 148 0 chr20 61468710 61468818 -5199187 + L2 LINE L2 3148 3271 -1 416 367 5 5 chr20 61468996 61469192 -5198813 - L1ME4a LINE L1 -438 5683 5488 198 0 0 0 chr20 61469549 61469571 -5198434 + (T)n Simple_repeat Simple_repeat 1 22 0 301 327 19 10 chr20 61469833 61469937 -5198068 - L1ME4a LINE L1 -1548 4598 4494 2208 125 0 3 chr20 61469939 61470244 -5197761 - AluSx SINE Alu -8 304 1 1050 274 31 82 chr20 61471992 61472274 -5195731 - MLT1K LTR MaLR -10 578 336 1584 150 184 53 chr20 61472274 61472444 -5195561 + MSTB LTR MaLR 1 147 -279 2030 114 7 23 chr20 61472444 61472752 -5195253 - AluSx SINE Alu -9 303 1 1584 150 184 53 chr20 61472752 61472955 -5195050 + MSTB LTR MaLR 147 423 -3 1050 274 31 82 chr20 61472955 61473222 -5194783 - MLT1K LTR MaLR -252 336 57 325 324 0 0 chr20 61473387 61473492 -5194513 - MLT1I LTR MaLR -203 206 102 22 0 0 0 chr20 61475939 61475961 -5192044 + AT_rich Low_complexity Low_complexity 1 22 0 278 291 97 28 chr20 61476025 61476475 -5191530 - L1ME4a LINE L1 -166 5955 5424 1347 169 175 10 chr20 61476475 61476789 -5191216 - MER47A DNA MER2_type 0 366 1 278 291 97 28 chr20 61476789 61476878 -5191127 - L1ME4a LINE L1 -697 5424 5343 353 313 166 57 chr20 61476880 61477459 -5190546 - L1ME4a LINE L1 -810 5336 4695 216 306 26 88 chr20 61477463 61477656 -5190349 + L2 LINE L2 3080 3260 -12 3680 279 85 16 chr20 61478376 61480718 -5187287 - L1ME3A LINE L1 -132 6038 3532 294 333 60 8 chr20 61480860 61480977 -5187028 - L2 LINE L2 0 3313 3191 276 285 110 74 chr20 61481081 61481193 -5186812 + L2 LINE L2 2862 2969 -344 513 0 0 0 chr20 61481193 61481250 -5186755 + (TG)n Simple_repeat Simple_repeat 2 58 0 1847 136 32 21 chr20 61481250 61481530 -5186475 - AluSx SINE Alu -29 283 1 276 285 110 74 chr20 61481530 61481834 -5186171 + L2 LINE L2 2968 3294 -19 237 108 0 0 chr20 61481980 61482017 -5185988 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 543 250 83 12 chr20 61482251 61482419 -5185586 - L1MD2 LINE L1 -1 6358 6179 367 351 73 11 chr20 61482446 61482637 -5185368 - MIR SINE MIR -40 222 20 326 250 0 0 chr20 61483639 61483719 -5184286 - MER116 DNA Mariner 0 80 1 2344 109 0 10 chr20 61484138 61484449 -5183556 - AluSg1 SINE Alu -1 308 1 199 330 34 30 chr20 61484773 61484921 -5183084 - MIR SINE MIR -62 146 20 813 228 49 15 chr20 61486011 61486243 -5181762 - MIR SINE MIR -8 254 23 281 329 176 0 chr20 61486486 61486702 -5181303 - L2 LINE L2 -215 3057 2804 509 322 120 38 chr20 61486772 61486945 -5181060 - L2 LINE L2 -10 3303 3146 2317 82 0 7 chr20 61486945 61487237 -5180768 + AluY SINE Alu 11 300 -11 509 322 120 38 chr20 61487237 61487739 -5180266 - L2 LINE L2 -167 3146 2563 719 89 18 0 chr20 61487995 61488107 -5179898 + (TTTC)n Simple_repeat Simple_repeat 3 116 0 2052 227 82 6 chr20 61488107 61488632 -5179373 - L1MB7 LINE L1 -12 6172 5608 490 262 60 0 chr20 61488869 61489018 -5178987 - L1M4 LINE L1 -534 5644 5487 235 325 0 13 chr20 61490453 61490530 -5177475 + L2 LINE L2 3151 3226 -46 375 287 149 23 chr20 61490537 61490798 -5177207 - LTR16C LTR ERVL 0 491 198 290 217 0 0 chr20 61491598 61491667 -5176338 - L1MB4 LINE L1 0 6180 6112 * 362 273 84 14 chr20 61491638 61491951 -5176054 - L1M4 LINE L1 -688 5474 5147 * 1484 242 54 40 chr20 61491928 61492357 -5175648 - L1MB5 LINE L1 -13 6161 5727 451 257 14 21 chr20 61492512 61492652 -5175353 + MIR3 SINE MIR 8 146 -62 1138 181 62 0 chr20 61492671 61492881 -5175124 + MER46A DNA MER2_type 14 236 0 196 336 56 28 chr20 61492881 61492988 -5175017 + MIR SINE MIR 153 262 0 821 155 69 23 chr20 61493007 61493181 -5174824 - L1MB5 LINE L1 -9 6165 5984 314 279 0 0 chr20 61493199 61493285 -5174720 - L1MB5 LINE L1 -275 5903 5818 * 1179 201 34 26 chr20 61493280 61493548 -5174457 + L1MB5 LINE L1 5535 5804 -370 234 339 55 46 chr20 61495041 61495259 -5172746 - L2 LINE L2 -14 3299 3080 956 250 10 0 chr20 61495718 61495918 -5172087 + MER58A DNA MER1_type 23 224 0 385 238 40 24 chr20 61497026 61497152 -5170853 + MER103 DNA DNA 19 146 -20 360 236 27 27 chr20 61497265 61497375 -5170630 + MIR SINE MIR 67 176 -86 222 194 75 75 chr20 61497765 61497832 -5170173 - L2 LINE L2 0 3272 3206 192 301 21 54 chr20 61498348 61498441 -5169564 - L3 LINE CR1 -645 932 843 707 288 17 13 chr20 61498617 61498853 -5169152 + MIR SINE MIR 16 252 -10 1494 162 24 24 chr20 61499253 61499506 -5168499 - AluJo SINE Alu -21 291 39 255 265 37 105 chr20 61500181 61500343 -5167662 + L2 LINE L2 3163 3313 0 579 174 0 0 chr20 61502458 61502573 -5165432 + (TG)n Simple_repeat Simple_repeat 1 115 0 404 315 28 0 chr20 61502671 61502814 -5165191 + L2 LINE L2 3158 3304 -9 234 0 0 0 chr20 61502819 61502845 -5165160 + (TGAG)n Simple_repeat Simple_repeat 2 27 0 252 325 0 0 chr20 61503189 61503269 -5164736 - MIR SINE MIR -181 81 2 188 208 104 0 chr20 61504122 61504170 -5163835 - L2 LINE L2 -14 3258 3206 1978 127 12 82 chr20 61504325 61504728 -5163277 - THE1C LTR MaLR 0 375 1 422 276 94 52 chr20 61504870 61505062 -5162943 + MIR SINE MIR 28 227 -35 22 0 0 0 chr20 61505122 61505144 -5162861 + AT_rich Low_complexity Low_complexity 1 22 0 1303 185 62 27 chr20 61505290 61505582 -5162423 - AluJo SINE Alu 0 302 1 234 287 15 85 chr20 61505590 61505732 -5162273 - MIR SINE MIR -61 201 68 2368 123 0 0 chr20 61506737 61507047 -5160958 - AluSg SINE Alu 0 310 1 190 313 25 25 chr20 61508683 61508763 -5159242 - MER5B DNA MER1_type -46 132 53 290 229 48 0 chr20 61509184 61509267 -5158738 - MIR SINE MIR -74 134 48 22 0 0 0 chr20 61509653 61509675 -5158330 + AT_rich Low_complexity Low_complexity 1 22 0 438 250 62 0 chr20 61511330 61511442 -5156563 + L2 LINE L2 3137 3255 -17 368 182 15 0 chr20 61511539 61511605 -5156400 + L2 LINE L2 3205 3271 -1 1379 171 23 26 chr20 61514591 61514855 -5153150 - MER58B DNA MER1_type -3 338 76 317 200 31 0 chr20 61515015 61515080 -5152925 - L2 LINE L2 -20 3293 3227 511 221 74 37 chr20 61515262 61515425 -5152580 + MER5B DNA MER1_type 4 172 -6 509 293 31 26 chr20 61518051 61518242 -5149763 + MER58C DNA MER1_type 22 213 -2 390 303 106 0 chr20 61518590 61518722 -5149283 - MIR SINE MIR -11 251 106 314 260 50 0 chr20 61518768 61518868 -5149137 + MER94 DNA DNA 1 105 -29 353 297 85 64 chr20 61519314 61519550 -5148455 + L2 LINE L2 3025 3265 -7 280 188 72 0 chr20 61520913 61520982 -5147023 + MIR SINE MIR 111 184 -78 207 213 0 21 chr20 61521093 61521140 -5146865 + GA-rich Low_complexity Low_complexity 3 48 0 1216 25 19 0 chr20 61521661 61521818 -5146187 - L1PA5 LINE L1 0 6154 5995 1681 90 43 0 chr20 61521818 61522073 -5145932 + L1P LINE L1 5108 5373 -773 180 280 60 10 chr20 61522389 61522489 -5145516 - L2 LINE L2 -249 3023 2919 367 248 9 19 chr20 61522491 61522596 -5145409 - MER58B DNA MER1_type -10 331 228 1594 166 16 82 chr20 61522656 61522975 -5145030 + AluJb SINE Alu 1 298 -14 231 313 49 7 chr20 61523298 61523442 -5144563 - MER113 DNA MER1_type? -329 192 43 524 250 24 39 chr20 61523704 61523895 -5144110 + MIR SINE MIR 8 197 -62 369 298 50 0 chr20 61524344 61524485 -5143520 + Charlie8 DNA MER1_type 85 232 -2185 2226 109 36 31 chr20 61525338 61525697 -5142308 + THE1B LTR MaLR 2 362 -2 285 156 119 92 chr20 61525879 61525988 -5142017 - MIR3 SINE MIR -45 163 44 565 188 27 0 chr20 61526561 61526673 -5141332 + MER58 DNA MER1_type 2306 2420 0 205 175 0 25 chr20 61527044 61527084 -5140921 + GA-rich Low_complexity Low_complexity 4 42 0 226 221 73 29 chr20 61527352 61527420 -5140585 + MER3 DNA MER1_type 33 103 -106 * 519 241 172 0 chr20 61527369 61527543 -5140462 - MER3 DNA MER1_type -5 204 1 380 222 37 0 chr20 61527640 61527721 -5140284 + MER58B DNA MER1_type 258 341 0 2264 125 23 47 chr20 61527992 61528376 -5139629 + THE1C LTR MaLR 1 375 0 262 277 87 0 chr20 61528376 61528463 -5139542 + L2 LINE L2 3213 3306 -7 * 617 252 112 46 chr20 61528458 61528851 -5139154 - L2 LINE L2 -908 2406 1988 203 211 84 95 chr20 61529474 61529569 -5138436 - MIR SINE MIR -99 163 70 261 390 35 7 chr20 61530815 61530956 -5137049 + MIR SINE MIR 85 229 -33 322 272 118 15 chr20 61531741 61531877 -5136128 - MIR SINE MIR -86 176 27 373 158 24 0 chr20 61532426 61532508 -5135497 + (TCCA)n Simple_repeat Simple_repeat 4 87 0 504 140 0 0 chr20 61532782 61532875 -5135130 + (CATTC)n Simple_repeat Simple_repeat 3 95 0 180 111 0 0 chr20 61532944 61532971 -5135034 + (TCCC)n Simple_repeat Simple_repeat 3 29 0 276 263 167 9 chr20 61533401 61533515 -5134490 - MIR SINE MIR -117 145 14 286 305 30 15 chr20 61534019 61534150 -5133855 + L2 LINE L2 2922 3054 -218 637 189 150 70 chr20 61534215 61534559 -5133446 + MLT1C LTR MaLR 6 425 -42 225 259 58 101 chr20 61534575 61534714 -5133291 + L2 LINE L2 3122 3254 -18 210 118 0 0 chr20 61534725 61534759 -5133246 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 668 160 8 17 chr20 61535499 61535618 -5132387 - MLT1A1 LTR MaLR -41 324 207 260 171 0 0 chr20 61535970 61536011 -5131994 + MIR SINE MIR 112 152 -110 323 228 185 0 chr20 61536098 61536236 -5131769 + MIR SINE MIR 31 188 -61 326 254 23 31 chr20 61536423 61536553 -5131452 + L2 LINE L2 2986 3114 -199 230 285 0 49 chr20 61536561 61536684 -5131321 + CT-rich Low_complexity Low_complexity 1 117 0 355 315 23 15 chr20 61537041 61537171 -5130834 - MIR3 SINE MIR -63 145 15 201 282 165 12 chr20 61537298 61537383 -5130622 - L2 LINE L2 -5 3267 3170 298 308 82 51 chr20 61537436 61537724 -5130281 - L2 LINE L2 -218 3054 2753 287 171 66 26 chr20 61537788 61537864 -5130141 - MLT1A1 LTR MaLR -60 305 227 272 273 15 0 chr20 61538557 61538623 -5129382 + MER45 DNA AcHobo 1515 1581 0 775 228 94 10 chr20 61540827 61541029 -5126976 - MER20 DNA MER1_type 0 219 1 626 229 31 51 chr20 61541166 61541400 -5126605 - MIR SINE MIR -15 247 18 198 216 39 0 chr20 61541398 61541449 -5126556 + MIR SINE MIR 178 230 -32 * 876 261 110 35 chr20 61541918 61542347 -5125658 - MLT1C LTR MaLR 0 467 7 367 302 217 14 chr20 61542800 61543426 -5124579 + L2 LINE L2 2201 2953 -361 181 323 169 11 chr20 61543505 61543694 -5124311 + L2 LINE L2 3093 3311 -2 1880 179 37 3 chr20 61545292 61545644 -5122361 - MLT1A1 LTR MaLR -1 364 1 414 192 23 8 chr20 61545762 61545860 -5122145 + MIR SINE MIR 73 173 -35 285 183 65 32 chr20 61546619 61546712 -5121293 - Charlie7 DNA MER1_type -67 2545 2450 1926 118 85 90 chr20 61547136 61547226 -5120779 - THE1B LTR MaLR 0 364 275 2356 125 0 0 chr20 61547226 61547538 -5120467 - AluSx SINE Alu 0 312 1 1926 118 85 90 chr20 61547538 61547813 -5120192 - THE1B LTR MaLR -89 275 1 264 287 18 102 chr20 61548443 61548610 -5119395 - MIR SINE MIR -18 244 92 284 240 100 0 chr20 61548673 61548773 -5119232 - L2 LINE L2 -25 3247 3138 1210 217 131 0 chr20 61548959 61549273 -5118732 + MLT2C1 LTR ERVL 2 356 -41 307 326 11 0 chr20 61549282 61549371 -5118634 + L1MC4 LINE L1 6614 6703 -1339 244 125 0 0 chr20 61549385 61549425 -5118580 + MLT2C1 LTR ERVL 508 547 -7 388 267 123 31 chr20 61549686 61549881 -5118124 + MIR SINE MIR 50 262 0 943 251 99 12 chr20 61550098 61550421 -5117584 - MLT1B LTR MaLR -17 373 23 343 279 12 2 chr20 61552043 61552153 -5115852 - MLT1H LTR MaLR -370 179 26 1757 137 37 13 chr20 61552950 61553250 -5114755 - L1PB1 LINE L1 0 6151 5845 270 294 172 37 chr20 61553410 61553811 -5114194 + L2 LINE L2 1978 2432 -882 414 329 59 16 chr20 61553980 61554284 -5113721 + L1MEc LINE L1 37 353 -6043 497 201 21 42 chr20 61554543 61554687 -5113318 + L1MEc LINE L1 883 1023 -5182 233 241 0 0 chr20 61554944 61555002 -5113003 - L1ME LINE L1 -423 5698 5641 1164 79 0 12 chr20 61555101 61555265 -5112740 - L1PA13 LINE L1 0 6163 6002 299 343 42 54 chr20 61555388 61555887 -5112118 + L1ME4a LINE L1 5616 6108 -13 1144 209 122 45 chr20 61556056 61556391 -5111614 + MLT1A1 LTR MaLR 3 363 -2 1533 79 14 0 chr20 61556576 61556791 -5111214 - L1PA5 LINE L1 0 6154 5937 1222 178 58 51 chr20 61557202 61557494 -5110511 - L1ME LINE L1 -407 5759 5466 630 181 64 18 chr20 61557591 61557762 -5110243 - L1ME LINE L1 -713 5465 5287 10857 211 64 34 chr20 61557763 61557867 -5110138 - L1 LINE L1 -1337 6228 6129 1825 192 0 13 chr20 61557867 61558175 -5109830 - AluJo SINE Alu -8 304 1 10857 211 64 34 chr20 61558175 61558826 -5109179 - L1 LINE L1 -1436 6129 5499 2200 128 0 7 chr20 61558826 61559130 -5108875 + AluSx SINE Alu 1 302 -10 10857 211 64 34 chr20 61559130 61562652 -5105353 - L1 LINE L1 -2066 5499 2055 3830 258 62 38 chr20 61562683 61562993 -5105012 - L1MEc LINE L1 -2218 4426 4125 1357 169 47 107 chr20 61562993 61563378 -5104627 - MLT1A1 LTR MaLR 0 365 4 3830 258 62 38 chr20 61563378 61565662 -5102343 - L1MEc LINE L1 -2519 4125 1633 2299 261 65 22 chr20 61565658 61566431 -5101574 - L1MEc LINE L1 -5554 1271 466 * 210 311 33 0 chr20 61566532 61566593 -5101412 + L2 LINE L2 2992 3054 -218 204 316 63 0 chr20 61566997 61567076 -5100929 + MIR SINE MIR 16 99 -163 * 1123 279 37 17 chr20 61567074 61567476 -5100529 - L2 LINE L2 -945 2369 1960 1231 251 83 34 chr20 61567940 61568387 -5099618 - L1MEc LINE L1 -6073 469 1 22 0 0 0 chr20 61568499 61568521 -5099484 + AT_rich Low_complexity Low_complexity 1 22 0 515 286 78 41 chr20 61568553 61568847 -5099158 - L1ME4a LINE L1 -208 5913 5609 348 283 18 9 chr20 61570676 61570789 -5097216 + MER94 DNA DNA 2 115 -19 555 244 128 17 chr20 61571299 61571479 -5096526 - MER20 DNA MER1_type -3 216 17 465 257 0 61 chr20 61571493 61571641 -5096364 - Charlie8 DNA MER1_type -2148 269 131 5363 173 81 11 chr20 61571669 61572820 -5095185 - Tigger3b DNA MER2_type 0 1231 1 438 206 19 56 chr20 61573682 61573789 -5094216 - MER5A DNA MER1_type -80 109 7 560 222 61 47 chr20 61573803 61574015 -5093990 - MER20 DNA MER1_type 0 219 5 376 300 91 36 chr20 61574279 61574532 -5093473 - L1ME4a LINE L1 -2255 5553 5287 742 259 29 5 chr20 61574684 61574889 -5093116 - MER58A DNA MER1_type -14 210 1 534 290 19 26 chr20 61575978 61576133 -5091872 - MIR SINE MIR -30 232 79 2162 94 0 0 chr20 61576363 61576628 -5091377 + AluSq SINE Alu 1 265 -48 240 314 64 36 chr20 61576738 61576878 -5091127 + MIR SINE MIR 23 166 -96 318 278 183 0 chr20 61577846 61577972 -5090033 - MIR SINE MIR -112 150 2 186 161 54 36 chr20 61578496 61578552 -5089453 - L2 LINE L2 -37 3235 3179 218 125 25 0 chr20 61578819 61578859 -5089146 + L2 LINE L2 2994 3034 -238 2259 99 0 0 chr20 61580405 61580709 -5087296 - AluSc SINE Alu -5 304 1 2710 128 146 17 chr20 61580886 61581353 -5086652 - MER1A DNA MER1_type 0 527 1 230 300 191 9 chr20 61581427 61581537 -5086468 - MIR SINE MIR -117 145 16 250 224 0 0 chr20 61581651 61581700 -5086305 + L2 LINE L2 3221 3269 -3 195 229 0 0 chr20 61581708 61581769 -5086236 + (TGGA)n Simple_repeat Simple_repeat 3 63 0 269 326 11 0 chr20 61581839 61581931 -5086074 + (TGGA)n Simple_repeat Simple_repeat 4 96 0 636 279 79 32 chr20 61582591 61582871 -5085134 - MER102b DNA MER1_type -48 293 1 501 309 29 19 chr20 61583152 61583359 -5084646 + MIR SINE MIR 34 242 -20 207 189 0 0 chr20 61583376 61583413 -5084592 + L2 LINE L2 3195 3231 -82 688 233 23 6 chr20 61583416 61583592 -5084413 - L1MB8 LINE L1 -2 6176 5998 427 273 6 24 chr20 61583768 61583933 -5084072 + (CAT)n Simple_repeat Simple_repeat 3 164 0 505 147 0 0 chr20 61584110 61584185 -5083820 + AluJo SINE Alu 2 76 -236 1288 141 0 41 chr20 61584308 61584550 -5083455 + AluJo SINE Alu 78 309 -3 543 257 21 21 chr20 61586087 61586231 -5081774 - MIR SINE MIR -87 175 32 354 347 73 11 chr20 61586271 61586545 -5081460 - MLT1J LTR MaLR -106 405 115 211 267 0 0 chr20 61586967 61587042 -5080963 + (CATCC)n Simple_repeat Simple_repeat 2 76 0 342 303 0 0 chr20 61587062 61587237 -5080768 + (CATCC)n Simple_repeat Simple_repeat 2 176 0 251 262 32 79 chr20 61587295 61587421 -5080584 - L2 LINE L2 -11 3261 3142 685 248 54 67 chr20 61588947 61589262 -5078743 - MLT2C1 LTR ERVL -86 311 1 304 354 58 58 chr20 61589593 61589850 -5078155 - L1MB8 LINE L1 -2102 5706 5450 281 138 69 0 chr20 61590072 61590130 -5077875 - L2 LINE L2 -49 3264 3203 405 180 0 0 chr20 61590343 61590432 -5077573 + (TTCA)n Simple_repeat Simple_repeat 2 90 0 370 359 128 39 chr20 61590432 61590769 -5077236 - L2 LINE L2 0 3272 2906 1788 190 39 3 chr20 61590769 61591106 -5076899 + MLT1A1 LTR MaLR 1 349 -16 232 127 36 18 chr20 61591951 61592006 -5075999 + CT-rich Low_complexity Low_complexity 1 56 0 907 298 86 35 chr20 61592907 61593514 -5074491 + MER20B DNA MER1_type 39 676 -107 231 36 0 0 chr20 61593931 61593959 -5074046 + (TGGA)n Simple_repeat Simple_repeat 3 30 0 183 288 50 0 chr20 61594303 61594383 -5073622 + L2 LINE L2 2939 3022 -250 263 237 140 53 chr20 61598405 61598519 -5069486 - MIR SINE MIR -14 248 125 262 155 70 56 chr20 61598638 61598709 -5069296 + MER30B DNA MER1_type 3 74 -116 * 2466 124 20 0 chr20 61598705 61599061 -5068944 - MER83C LTR ERV1 -9 364 2 194 214 0 0 chr20 61599541 61599583 -5068422 + L2 LINE L2 3019 3060 -212 363 326 156 35 chr20 61599654 61599818 -5068187 + L2 LINE L2 2991 3134 -179 1269 111 92 32 chr20 61599818 61600035 -5067970 + MER30B DNA MER1_type 1 230 0 363 326 156 35 chr20 61600035 61600158 -5067847 + L2 LINE L2 3134 3313 0 21 0 0 0 chr20 61601728 61601749 -5066256 + AT_rich Low_complexity Low_complexity 1 21 0 281 313 21 0 chr20 61603493 61603589 -5064416 - MIR SINE MIR -14 248 151 1154 164 53 5 chr20 61606684 61606892 -5061113 + MER20 DNA MER1_type 2 219 0 6020 139 53 20 chr20 61607847 61609955 -5058050 + L1MA4A LINE L1 4115 6296 -7 262 380 0 0 chr20 61610733 61610804 -5057201 - L2 LINE L2 -55 3258 3188 221 335 225 19 chr20 61613128 61613337 -5054668 + MIR SINE MIR 8 259 -3 306 281 49 0 chr20 61613590 61613672 -5054333 + MIR SINE MIR 58 143 -65 200 35 35 0 chr20 61613719 61613748 -5054257 + (TA)n Simple_repeat Simple_repeat 2 31 0 21 36 0 0 chr20 61613828 61613856 -5054149 + AT_rich Low_complexity Low_complexity 1 28 0 1948 142 10 0 chr20 61614825 61615127 -5052878 + AluJb SINE Alu 1 305 -7 523 230 28 25 chr20 61616846 61617049 -5050956 + MER58 DNA MER1_type 3 2411 -9 375 121 17 0 chr20 61617655 61617713 -5050292 - U7 snRNA snRNA -2 61 3 2829 9 0 0 chr20 61617908 61618226 -5049779 + AluYb8 SINE Alu 1 318 0 231 325 114 0 chr20 61618247 61618361 -5049644 - L2 LINE L2 -1 3271 3145 260 339 28 18 chr20 61618567 61618676 -5049329 - L2 LINE L2 -433 2881 2772 2527 137 62 32 chr20 61618682 61619183 -5048822 - L1MB5 LINE L1 -1 6173 5654 2431 150 53 17 chr20 61619183 61619596 -5048409 + MSTA LTR MaLR 1 428 0 2527 137 62 32 chr20 61619596 61619627 -5048378 - L1MB5 LINE L1 -520 5654 5625 474 129 65 0 chr20 61619627 61619720 -5048285 + MSTA-int LTR MaLR 32 130 -1521 * 7405 26 7 0 chr20 61619717 61620576 -5047429 - L1PA4 LINE L1 -1486 4660 3796 7613 28 9 0 chr20 61620576 61622063 -5045942 + L1PA4 LINE L1 4662 6155 0 4594 183 29 6 chr20 61622063 61622889 -5045116 + MSTA-int LTR MaLR 122 966 -685 2335 127 8 14 chr20 61622884 61623245 -5044760 + MSTA-int LTR MaLR 1293 1651 0 * 2115 184 53 19 chr20 61623245 61623657 -5044348 + MSTA LTR MaLR 1 426 -2 7620 220 84 10 chr20 61623659 61625623 -5042382 - L1M3 LINE L1 -520 5660 3451 1470 189 9 25 chr20 61625623 61625940 -5042065 + AluJo SINE Alu 1 312 0 7620 220 84 10 chr20 61625940 61626555 -5041450 - L1M3 LINE L1 -2729 3451 2883 464 313 316 25 chr20 61626564 61627450 -5040555 - L2 LINE L2 -563 2751 2124 195 100 0 0 chr20 61627450 61627480 -5040525 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 464 313 316 25 chr20 61627480 61628100 -5039905 - L2 LINE L2 -1190 2124 806 268 274 142 9 chr20 61628168 61628281 -5039724 - L2 LINE L2 -3140 174 47 21 0 0 0 chr20 61628990 61629011 -5038994 + AT_rich Low_complexity Low_complexity 1 21 0 40 59 0 0 chr20 61630694 61630762 -5037243 + AT_rich Low_complexity Low_complexity 1 68 0 26 0 0 0 chr20 61630852 61630878 -5037127 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr20 61631241 61631269 -5036736 + AT_rich Low_complexity Low_complexity 1 28 0 231 88 0 0 chr20 61632000 61632034 -5035971 + (A)n Simple_repeat Simple_repeat 1 34 0 220 278 0 0 chr20 61632288 61632360 -5035645 + A-rich Low_complexity Low_complexity 1 72 0 271 258 123 54 chr20 61635127 61635460 -5032545 + L1ME LINE L1 4211 4566 -1580 445 259 140 26 chr20 61635949 61636264 -5031741 + L1ME LINE L1 5258 5602 -582 1706 155 59 3 chr20 61636454 61636758 -5031247 + MER2 DNA MER2_type 24 344 -1 2480 181 41 24 chr20 61636967 61637508 -5030497 + MER44D DNA MER2_type 1 605 0 228 128 26 0 chr20 61637897 61637936 -5030069 - Tigger7 DNA MER2_type -52 2435 2396 * 3045 164 17 8 chr20 61637930 61638450 -5029555 - Tigger7 DNA MER2_type -208 525 1 197 351 0 18 chr20 61639230 61639287 -5028718 - L3 LINE CR1 -6 1571 1516 2424 81 0 0 chr20 61640921 61641230 -5026775 + AluSc SINE Alu 1 309 0 809 273 19 10 chr20 61641375 61641584 -5026421 + MIR SINE MIR 31 241 -21 24 0 0 0 chr20 61642954 61642978 -5025027 + AT_rich Low_complexity Low_complexity 1 24 0 269 284 68 27 chr20 61643897 61643971 -5024034 + L2 LINE L2 3098 3174 -98 245 140 0 0 chr20 61644642 61644692 -5023313 + LTR66 LTR ERVL 394 443 -167 239 130 0 0 chr20 61644654 61644700 -5023305 - LTR66 LTR ERVL -171 439 394 * 218 278 42 0 chr20 61644700 61644772 -5023233 + (CATATA)n Simple_repeat Simple_repeat 2 76 0 185 111 44 0 chr20 61645366 61645411 -5022594 + A-rich Low_complexity Low_complexity 4 50 0 418 310 92 7 chr20 61645928 61646070 -5021935 + MIR3 SINE MIR 45 198 -10 21 0 0 0 chr20 61646588 61646609 -5021396 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr20 61646639 61646673 -5021332 + AT_rich Low_complexity Low_complexity 1 34 0 3489 130 77 14 chr20 61646994 61647639 -5020366 + L1MA4 LINE L1 5334 6020 -280 381 145 36 0 chr20 61647645 61647728 -5020277 + L1MB4 LINE L1 6095 6180 0 2151 110 0 0 chr20 61647896 61648206 -5019799 + AluSx SINE Alu 1 310 0 1954 149 78 126 chr20 61648206 61648831 -5019174 + L1MA9 LINE L1 5680 6274 -38 22 0 0 0 chr20 61649710 61649732 -5018273 + AT_rich Low_complexity Low_complexity 1 22 0 5404 44 6 0 chr20 61651836 61652491 -5015514 - L1PA5 LINE L1 -5 6149 5491 2960 279 58 14 chr20 61652550 61653889 -5014116 + L1M4 LINE L1 3179 4603 -1543 1391 180 65 20 chr20 61653885 61654191 -5013814 + L1MC2 LINE L1 6000 6319 -25 * 264 86 0 143 chr20 61654344 61654414 -5013591 - L1MB3 LINE L1 -1 6182 6123 5528 55 13 1 chr20 61654658 61655362 -5012643 + L1PA7 LINE L1 5440 6151 -3 417 39 0 0 chr20 61655362 61655413 -5012592 + (TAGG)n Simple_repeat Simple_repeat 1 51 0 21 0 0 0 chr20 61655624 61655645 -5012360 + AT_rich Low_complexity Low_complexity 1 21 0 211 264 58 46 chr20 61656336 61656423 -5011582 - L2 LINE L2 0 3272 3185 187 264 57 0 chr20 61656567 61656620 -5011385 - L2 LINE L2 -1 3271 3216 22 56 0 0 chr20 61658003 61658039 -5009966 + AT_rich Low_complexity Low_complexity 1 36 0 364 301 14 34 chr20 61659049 61659195 -5008810 + MER20B DNA MER1_type 35 177 -606 350 310 60 60 chr20 61660470 61660670 -5007335 - L2 LINE L2 -830 2484 2285 442 229 104 92 chr20 61660746 61660995 -5007010 - MIR SINE MIR -10 252 1 23 0 0 0 chr20 61661002 61661025 -5006980 + AT_rich Low_complexity Low_complexity 1 23 0 323 288 13 12 chr20 61662302 61662403 -5005602 - MER5A DNA MER1_type -60 119 17 1917 88 6 117 chr20 61662604 61662946 -5005059 + AluSx SINE Alu 1 304 -8 4475 52 14 2 chr20 61662946 61663506 -5004499 + L1PA7 LINE L1 5568 6134 -20 276 343 10 30 chr20 61666736 61666835 -5001170 + MIR SINE MIR 52 147 -61 305 333 176 14 chr20 61668135 61668646 -4999359 - L2 LINE L2 -1479 1835 1242 1282 181 81 4 chr20 61669487 61669746 -4998259 - MSTB LTR MaLR 0 426 148 352 233 11 22 chr20 61669800 61669890 -4998115 + L1ME1 LINE L1 4066 4154 -1992 1936 249 47 23 chr20 61669900 61670515 -4997490 + L1ME1 LINE L1 5478 6107 -59 965 231 4 51 chr20 61670513 61670768 -4997237 + L1ME LINE L1 3982 4224 -1922 * 2499 246 97 8 chr20 61670810 61671780 -4996225 + L1ME LINE L1 4409 5471 -695 2312 76 0 10 chr20 61672767 61673081 -4994924 + AluY SINE Alu 1 311 0 234 185 34 118 chr20 61673475 61673594 -4994411 - L1MC5 LINE L1 -72 7889 7781 265 310 83 7 chr20 61673810 61673955 -4994050 + L2 LINE L2 1936 2091 -1223 251 318 114 49 chr20 61674053 61674317 -4993688 + L2 LINE L2 2396 2676 -638 263 217 83 0 chr20 61674358 61674418 -4993587 + L2 LINE L2 3246 3310 -3 480 308 159 17 chr20 61674565 61674935 -4993070 - L2 LINE L2 -111 3202 2784 212 259 86 0 chr20 61675074 61675132 -4992873 + L2 LINE L2 3247 3309 -4 1629 57 14 0 chr20 61675177 61675388 -4992617 - AluY SINE Alu -4 307 94 591 88 0 0 chr20 61675522 61675602 -4992403 - MADE1 DNA Mariner 0 80 1 1882 146 16 48 chr20 61677478 61677854 -4990151 + THE1B LTR MaLR 1 364 0 439 289 104 6 chr20 61677972 61678145 -4989860 - MIR SINE MIR -38 224 35 217 260 40 0 chr20 61678198 61678248 -4989757 - L2 LINE L2 0 3313 3262 22 35 0 0 chr20 61678268 61678297 -4989708 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr20 61678850 61678880 -4989125 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr20 61679491 61679519 -4988486 + AT_rich Low_complexity Low_complexity 1 28 0 2162 98 24 3 chr20 61680517 61680813 -4987192 + AluSx SINE Alu 1 302 -10 1714 154 82 0 chr20 61681460 61681739 -4986266 + AluJb SINE Alu 1 302 -10 247 344 70 14 chr20 61682113 61682328 -4985677 + MARNA DNA Mariner 339 565 -21 288 295 0 0 chr20 61682658 61682719 -4985286 + MER58 DNA MER1_type 1 61 -325 5132 188 42 9 chr20 61682719 61683848 -4984157 + Cheshire DNA MER1_type 1254 2420 0 286 275 144 24 chr20 61684770 61684937 -4983068 - L2 LINE L2 -24 3289 3103 339 353 72 1 chr20 61685335 61685512 -4982493 - MIR SINE MIR -30 232 45 23 0 0 0 chr20 61686460 61686483 -4981522 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr20 61686713 61686743 -4981262 + AT_rich Low_complexity Low_complexity 1 30 0 320 306 144 38 chr20 61687435 61687595 -4980410 - MIR3 SINE MIR -27 181 5 899 214 30 45 chr20 61688321 61688522 -4979483 + AluJo SINE Alu 103 300 -12 242 256 30 43 chr20 61688621 61688755 -4979250 + L1ME LINE L1 2144 2278 -4118 2788 126 81 16 chr20 61688755 61689264 -4978741 + MER34 LTR ERV1 1 542 0 242 256 30 43 chr20 61689264 61689288 -4978717 + L1ME LINE L1 2274 2301 -4091 845 86 55 0 chr20 61689288 61689416 -4978589 + L1MA1 LINE L1 6168 6302 0 354 298 89 0 chr20 61689468 61689592 -4978413 + L1ME LINE L1 2283 2417 -3798 298 293 76 49 chr20 61689615 61689878 -4978127 + L1M4 LINE L1 4803 5072 -1074 1376 98 64 0 chr20 61689966 61690170 -4977835 + L1PA10 LINE L1 5939 6155 -13 1426 181 101 73 chr20 61691028 61691482 -4976523 - MLT1C LTR MaLR 0 467 1 818 292 72 53 chr20 61693108 61693677 -4974328 + L1ME LINE L1 4546 5125 -1090 391 294 81 27 chr20 61693845 61694290 -4973715 + L1ME LINE L1 5338 5806 -425 1274 229 184 22 chr20 61695113 61695737 -4972268 + Zaphod DNA AcHobo 266 990 -3041 429 196 274 0 chr20 61695735 61695939 -4972066 + Zaphod DNA AcHobo 3595 3854 -177 * 1193 180 98 27 chr20 61695943 61696199 -4971806 + AluJb SINE Alu 11 284 -28 468 203 82 1 chr20 61696207 61696384 -4971621 + MER115 DNA AcHobo 542 693 0 2156 99 7 0 chr20 61697196 61697500 -4970505 + AluSx SINE Alu 1 306 -6 455 293 74 123 chr20 61697775 61698694 -4969311 + L1M2 LINE L1 511 1231 -5618 29 28 0 0 chr20 61699504 61699540 -4968465 + AT_rich Low_complexity Low_complexity 1 36 0 1596 178 7 24 chr20 61700294 61700587 -4967418 + AluJo SINE Alu 7 294 -18 439 290 89 36 chr20 61700674 61700746 -4967259 + MIR SINE MIR 21 88 -174 1464 170 65 30 chr20 61700746 61701082 -4966923 - MER7A DNA MER2_type 0 346 1 439 290 89 36 chr20 61701082 61701233 -4966772 + MIR SINE MIR 88 256 -6 323 281 84 105 chr20 61704434 61704921 -4963084 + L1M2 LINE L1 547 1023 -5826 22 56 0 0 chr20 61705249 61705285 -4962720 + GC_rich Low_complexity Low_complexity 1 36 0 204 318 39 70 chr20 61707487 61707616 -4960389 + MIR SINE MIR 50 174 -88 186 234 31 47 chr20 61707697 61707761 -4960244 - MIR SINE MIR -9 253 191 2441 76 10 0 chr20 61712027 61712331 -4955674 + AluSp SINE Alu 1 307 -6 231 114 0 0 chr20 61712840 61712875 -4955130 + (A)n Simple_repeat Simple_repeat 1 35 0 4843 134 3 5 chr20 61714920 61715200 -4952805 - L1PB3 LINE L1 0 6154 5875 1606 117 5 0 chr20 61715200 61715447 -4952558 + AluSg SINE Alu 58 305 0 4843 134 3 5 chr20 61715447 61715697 -4952308 - L1PB3 LINE L1 -279 5875 5626 2203 114 56 11 chr20 61715697 61716056 -4951949 - THE1C LTR MaLR 0 375 1 4843 134 3 5 chr20 61716056 61716688 -4951317 - L1PB3 LINE L1 -528 5626 5020 452 175 0 10 chr20 61716688 61716785 -4951220 + L1PB3 LINE L1 4923 5018 -1128 1248 99 139 0 chr20 61717276 61717478 -4950527 + MER30 DNA MER1_type 1 230 0 2390 107 0 0 chr20 61718211 61718511 -4949494 + AluSx SINE Alu 1 300 -12 359 250 69 69 chr20 61718645 61718725 -4949280 - L1ME LINE L1 -5909 161 82 540 0 0 0 chr20 61718725 61718785 -4949220 + (TA)n Simple_repeat Simple_repeat 1 60 0 * 576 29 0 0 chr20 61718784 61718854 -4949151 + (GA)n Simple_repeat Simple_repeat 2 71 0 359 250 69 69 chr20 61718785 61718854 -4949151 - L1ME LINE L1 -5988 82 78 1798 100 66 8 chr20 61718854 61719113 -4948892 - AluSq SINE Alu -39 274 1 359 250 69 69 chr20 61719113 61719191 -4948814 - L1ME LINE L1 -5991 79 2 1161 104 0 7 chr20 61720502 61720676 -4947329 - AluSp SINE Alu 0 302 130 220 137 0 59 chr20 61721155 61721206 -4946799 + (TTTTTA)n Simple_repeat Simple_repeat 2 49 0 2310 131 0 8 chr20 61721209 61721576 -4946429 - L1PB1 LINE L1 -3 6148 5785 258 244 0 0 chr20 61721588 61721678 -4946327 + L1MC4 LINE L1 6614 6703 -1339 265 244 47 0 chr20 61721698 61721784 -4946221 - L1MC4 LINE L1 -1339 6703 6614 235 170 38 0 chr20 61721792 61721845 -4946160 - L1MC4 LINE L1 -1339 6703 6649 3531 114 12 1 chr20 61721858 61722576 -4945429 - L1P5 LINE L1 -365 5786 5063 201 132 0 0 chr20 61723558 61723596 -4944409 + (CTG)n Simple_repeat Simple_repeat 3 40 0 1881 183 3 0 chr20 61723891 61724202 -4943803 - AluJb SINE Alu 0 312 1 1882 132 28 0 chr20 61724213 61724502 -4943503 - AluSx SINE Alu -15 297 1 347 322 26 9 chr20 61724914 61725029 -4942976 - MER5B DNA MER1_type -5 173 57 229 336 26 0 chr20 61725042 61725155 -4942850 + MIR SINE MIR 102 217 -45 2235 176 11 20 chr20 61725155 61725197 -4942808 + MER65A LTR ERV1 1 42 -403 243 0 0 0 chr20 61725197 61725224 -4942781 + (CA)n Simple_repeat Simple_repeat 2 28 0 2235 176 11 20 chr20 61725224 61725630 -4942375 + MER65A LTR ERV1 42 445 0 232 282 141 12 chr20 61725695 61725780 -4942225 - L2 LINE L2 -6 3307 3212 203 306 245 24 chr20 61726857 61727039 -4940966 - L2 LINE L2 -428 2886 2745 1584 200 63 46 chr20 61727039 61727498 -4940507 - MLT1C LTR MaLR 0 467 1 203 306 245 24 chr20 61727498 61727809 -4940196 - L2 LINE L2 -569 2745 2284 289 231 132 0 chr20 61727852 61727943 -4940062 + MIR SINE MIR 111 213 -49 245 271 14 0 chr20 61727979 61728049 -4939956 - MIR SINE MIR -126 136 66 1357 159 10 0 chr20 61728055 61728263 -4939742 - AluJb SINE Alu -12 300 91 738 209 44 6 chr20 61728340 61728522 -4939483 - MER3 DNA MER1_type -20 189 1 386 250 5 0 chr20 61729601 61729706 -4938299 - MIR3 SINE MIR -5 203 97 4326 213 43 30 chr20 61730145 61731255 -4936750 - Charlie1a DNA MER1_type -66 1389 265 968 149 106 124 chr20 61731287 61731569 -4936436 - Charlie1a DNA MER1_type -1178 277 1 579 225 20 25 chr20 61731569 61731733 -4936272 + L1ME3 LINE L1 5673 5829 -333 254 264 82 18 chr20 61732316 61732426 -4935579 - L1MC4 LINE L1 0 8042 7926 1212 59 0 32 chr20 61732516 61732628 -4935377 + (TTTC)n Simple_repeat Simple_repeat 1 288 0 1212 59 0 32 chr20 61732628 61732814 -4935191 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2118 136 3 0 chr20 61732890 61733199 -4934806 - AluSx SINE Alu -2 310 1 21 36 0 0 chr20 61733328 61733356 -4934649 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr20 61733743 61733768 -4934237 + AT_rich Low_complexity Low_complexity 1 25 0 676 209 83 117 chr20 61734141 61734561 -4933444 + MER113 DNA MER1_type? 18 423 -98 377 252 0 28 chr20 61735096 61735203 -4932802 + MIR3 SINE MIR 7 110 -98 362 224 78 104 chr20 61735249 61735331 -4932674 + Charlie8 DNA MER1_type 34 117 -224 2310 75 7 0 chr20 61735331 61735658 -4932347 + AluY SINE Alu 1 329 0 362 224 78 104 chr20 61735658 61735766 -4932239 + Charlie8 DNA MER1_type 117 220 -121 357 309 96 26 chr20 61736041 61736271 -4931734 + MIR SINE MIR 13 258 -4 325 261 102 61 chr20 61736401 61736660 -4931345 - L1MC4a LINE L1 -294 5827 5621 419 214 169 32 chr20 61737926 61738080 -4929925 - MER5A DNA MER1_type -6 183 9 6422 90 25 1 chr20 61738200 61739088 -4928917 - L1PA13 LINE L1 0 6163 5255 385 142 0 0 chr20 61739100 61739176 -4928829 + L1PA13 LINE L1 5173 5248 -898 275 226 25 161 chr20 61739611 61739854 -4928151 + L2 LINE L2 3104 3313 0 1938 206 52 9 chr20 61739900 61740346 -4927659 + MLT1C LTR MaLR 1 465 -2 42 77 0 0 chr20 61742273 61742364 -4925641 + AT_rich Low_complexity Low_complexity 1 91 0 3961 154 80 32 chr20 61742387 61743172 -4924833 - L1MC2 LINE L1 -8 6336 5514 2182 110 7 0 chr20 61743181 61743473 -4924532 - AluSx SINE Alu -15 297 4 22 56 0 0 chr20 61743712 61743748 -4924257 + AT_rich Low_complexity Low_complexity 1 36 0 3090 239 68 43 chr20 61743809 61743990 -4924015 - L1ME1 LINE L1 -167 5999 5824 2099 136 3 3 chr20 61743990 61744299 -4923706 - AluSc SINE Alu 0 309 1 3090 239 68 43 chr20 61744299 61744416 -4923589 - L1ME1 LINE L1 -342 5824 5711 2323 121 0 0 chr20 61744416 61744729 -4923276 - AluSq SINE Alu 0 313 1 3090 239 68 43 chr20 61744729 61745095 -4922910 - L1ME1 LINE L1 -455 5711 5355 2234 112 0 10 chr20 61745095 61745400 -4922605 - AluSq SINE Alu -11 302 1 3090 239 68 43 chr20 61745400 61746379 -4921626 - L1ME1 LINE L1 -811 5355 4272 2447 223 36 42 chr20 61746370 61747185 -4920820 - L1ME1 LINE L1 -2299 3847 3038 * 412 229 61 15 chr20 61747520 61747651 -4920354 - L2 LINE L2 -17 3255 3119 242 299 8 24 chr20 61748475 61748602 -4919403 + (TA)n Simple_repeat Simple_repeat 2 126 0 376 277 73 24 chr20 61748675 61748881 -4919124 - L1ME4a LINE L1 -283 5838 5623 21 0 0 0 chr20 61749617 61749638 -4918367 + AT_rich Low_complexity Low_complexity 1 21 0 2278 143 13 81 chr20 61750013 61750468 -4917537 - MSTB LTR MaLR -1 425 2 188 301 154 8 chr20 61750573 61750696 -4917309 - MIR SINE MIR -11 251 111 994 211 44 0 chr20 61750726 61750930 -4917075 - MER20 DNA MER1_type 0 219 7 21 82 0 0 chr20 61751219 61751268 -4916737 + AT_rich Low_complexity Low_complexity 1 49 0 396 0 0 0 chr20 61751419 61751463 -4916542 + (CA)n Simple_repeat Simple_repeat 2 45 0 180 273 273 11 chr20 61751472 61751560 -4916445 + L2 LINE L2 3201 3311 -2 191 204 19 0 chr20 61752140 61752194 -4915811 + CT-rich Low_complexity Low_complexity 2 56 0 321 131 72 189 chr20 61752772 61752925 -4915080 + ORSL DNA AcHobo 138 272 -3 413 316 20 13 chr20 61752927 61753079 -4914926 - MIR SINE MIR -97 165 13 246 261 65 33 chr20 61753153 61753245 -4914760 - MER5A DNA MER1_type -85 104 10 2934 16 0 0 chr20 61754049 61754366 -4913639 + AluYb8 SINE Alu 1 317 -1 2201 131 63 14 chr20 61754652 61755079 -4912926 - L1MB3 LINE L1 0 6183 5736 309 264 45 0 chr20 61755311 61755421 -4912584 - MER5C DNA MER1_type 0 324 210 657 201 42 58 chr20 61755581 61755660 -4912345 - MER5A DNA MER1_type -1 188 109 1619 136 0 0 chr20 61755660 61755896 -4912109 - AluSg/x SINE Alu 0 312 77 657 201 42 58 chr20 61755896 61756005 -4912000 - MER5A DNA MER1_type -80 109 3 2670 153 18 2 chr20 61758073 61758511 -4909494 - L1PB3 LINE L1 0 6154 5710 858 247 41 4 chr20 61758522 61758802 -4909203 - L1MD2 LINE L1 -1 6358 5947 501 252 114 19 chr20 61759327 61759537 -4908468 - MLT1K LTR MaLR -27 561 332 507 229 112 66 chr20 61759571 61759829 -4908176 - MLT1K LTR MaLR -317 271 2 1330 249 94 35 chr20 61759919 61760485 -4907520 + MER77 LTR ERV1 24 673 -8 220 314 12 12 chr20 61761231 61761317 -4906688 - L2 LINE L2 0 3272 3187 1053 195 49 0 chr20 61761750 61761955 -4906050 + MER20 DNA MER1_type 1 215 -4 770 248 149 40 chr20 61764735 61765163 -4902842 + MER113 DNA MER1_type? 44 518 -3 202 299 197 8 chr20 61765194 61765321 -4902684 + MER91A DNA MER1_type 45 195 -1 223 246 9 118 chr20 61765386 61765496 -4902509 - MIR SINE MIR -48 214 117 455 246 109 38 chr20 61766669 61766852 -4901153 - L1MD3 LINE L1 -11 7984 7789 743 256 23 0 chr20 61767140 61767312 -4900693 + MER45A DNA AcHobo 3 178 0 199 250 19 0 chr20 61767959 61768011 -4899994 - MIR3 SINE MIR -3 205 153 30 77 0 0 chr20 61768481 61768546 -4899459 + AT_rich Low_complexity Low_complexity 1 65 0 461 192 17 33 chr20 61769024 61769050 -4898955 + (TATATG)n Simple_repeat Simple_repeat 3 28 -92 1984 145 38 26 chr20 61769050 61769286 -4898719 - MER7A DNA MER2_type -2692 346 105 2561 70 0 3 chr20 61769286 61769598 -4898407 + AluY SINE Alu 1 311 0 1984 145 38 26 chr20 61769598 61769705 -4898300 - MER7A DNA MER2_type -2933 105 1 461 192 17 33 chr20 61769705 61769741 -4898264 + (TATATG)n Simple_repeat Simple_repeat 28 63 -57 2517 141 57 24 chr20 61769741 61770161 -4897844 + Tigger2a DNA MER2_type 1 434 0 461 192 17 33 chr20 61770161 61770217 -4897788 + (TATATG)n Simple_repeat Simple_repeat 63 120 0 501 175 0 0 chr20 61770226 61770329 -4897676 + (TATG)n Simple_repeat Simple_repeat 3 105 0 203 331 99 16 chr20 61770429 61770550 -4897455 + L2 LINE L2 2672 2802 -512 1617 204 19 37 chr20 61771689 61772066 -4895939 - MLT1A2 LTR MaLR -4 370 1 1041 168 113 110 chr20 61772127 61772436 -4895569 - MER66A LTR ERV1 0 478 169 370 171 8 124 chr20 61772411 61772540 -4895465 - MER41A LTR ERV1 -251 303 190 * 589 314 23 9 chr20 61773036 61773256 -4894749 - MIR SINE MIR -21 241 19 182 326 11 34 chr20 61773250 61773339 -4894666 - MER5B DNA MER1_type -33 145 59 * 189 204 91 0 chr20 61774072 61774116 -4893889 + MIR SINE MIR 106 153 -55 216 67 0 0 chr20 61775293 61775323 -4892682 + (TCCCC)n Simple_repeat Simple_repeat 5 34 0 368 185 158 8 chr20 61775773 61775892 -4892113 - MLT1J2 LTR MaLR -337 113 1 801 261 62 0 chr20 61776311 61776522 -4891483 - MER58A DNA MER1_type 0 224 1 24 0 0 0 chr20 61778449 61778473 -4889532 + AT_rich Low_complexity Low_complexity 1 24 0 15079 199 53 21 chr20 61778970 61779795 -4888210 - L1MA5A LINE L1 -9 6930 6133 2024 137 0 10 chr20 61779795 61780088 -4887917 - AluSx SINE Alu -22 290 1 15079 199 53 21 chr20 61780088 61785988 -4882017 - L1MA5A LINE L1 -806 6133 2 1035 233 5 5 chr20 61786065 61786267 -4881738 + MER58A DNA MER1_type 22 223 -1 441 0 0 0 chr20 61786652 61786701 -4881304 + (CA)n Simple_repeat Simple_repeat 2 50 0 180 0 0 0 chr20 61786700 61786720 -4881285 + (TA)n Simple_repeat Simple_repeat 2 21 0 * 1422 241 108 15 chr20 61787672 61788136 -4879869 + MLT1J LTR MaLR 5 511 0 276 30 0 0 chr20 61788758 61788791 -4879214 + (GA)n Simple_repeat Simple_repeat 2 34 0 901 236 120 59 chr20 61789523 61789997 -4878008 + MLT1J LTR MaLR 1 503 -8 502 259 15 58 chr20 61790181 61790386 -4877619 - MARNA DNA Mariner -140 446 251 263 280 28 9 chr20 61791034 61791141 -4876864 + MLT2C1 LTR ERVL 57 165 -232 * 1531 247 26 68 chr20 61791060 61791193 -4876812 + MLT1E2 LTR MaLR 81 218 -408 348 24 0 0 chr20 61791193 61791234 -4876771 + (GA)n Simple_repeat Simple_repeat 2 42 0 1531 247 26 68 chr20 61791234 61791643 -4876362 + MLT1E2 LTR MaLR 218 600 -26 335 240 164 10 chr20 61791663 61791767 -4876238 + L2 LINE L2 3194 3313 0 376 202 45 0 chr20 61792108 61792197 -4875808 - L1MC4 LINE L1 -26 8016 7924 197 220 0 17 chr20 61792221 61792280 -4875725 + CT-rich Low_complexity Low_complexity 2 59 0 234 191 0 0 chr20 61792300 61792347 -4875658 - L1MC4 LINE L1 -157 7885 7839 410 230 80 0 chr20 61792373 61792486 -4875519 - L1ME2 LINE L1 -2 6162 6041 546 271 65 0 chr20 61792486 61792641 -4875364 + MER3 DNA MER1_type 5 122 -87 1356 271 41 24 chr20 61792663 61793156 -4874849 - L1MD2 LINE L1 -2 6357 5856 313 198 267 10 chr20 61793156 61793257 -4874748 + L2 LINE L2 3136 3262 -10 2731 234 10 0 chr20 61793493 61794083 -4873922 + L1MB1 LINE L1 5502 6097 -92 422 119 16 127 chr20 61794226 61794283 -4873722 + L1MB1 LINE L1 6073 6135 -54 3117 65 3 0 chr20 61794283 61794668 -4873337 - L1PA8 LINE L1 -13 6159 5774 422 119 16 127 chr20 61794668 61794717 -4873288 + L1MB1 LINE L1 6135 6166 -23 300 53 0 0 chr20 61794717 61794755 -4873250 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 422 119 16 127 chr20 61794755 61794773 -4873232 + L1MB1 LINE L1 6166 6184 -5 258 137 200 63 chr20 61794885 61794980 -4873025 - L1MA10 LINE L1 -12 6322 6215 557 288 157 57 chr20 61795151 61795178 -4872827 + MLT1K LTR MaLR 3 26 -562 229 67 22 22 chr20 61795178 61795223 -4872782 + (TTTTG)n Simple_repeat Simple_repeat 2 46 0 557 288 157 57 chr20 61795223 61795685 -4872320 + MLT1K LTR MaLR 26 541 -47 1969 69 0 4 chr20 61795736 61795982 -4872023 - MER41A LTR ERV1 -87 467 223 295 225 62 70 chr20 61796952 61797081 -4870924 - MLT1J2 LTR MaLR 0 450 323 251 261 15 15 chr20 61797117 61797182 -4870823 - MLT1J LTR MaLR -339 172 108 4401 16 0 0 chr20 61797318 61797814 -4870191 + L1PA2 LINE L1 5660 6155 0 373 341 24 18 chr20 61797886 61798050 -4869955 + MIR SINE MIR 18 182 -80 386 322 142 22 chr20 61798194 61798377 -4869628 - MIR SINE MIR -10 252 48 288 0 0 0 chr20 61798576 61798608 -4869397 + (TG)n Simple_repeat Simple_repeat 1 32 0 725 301 138 43 chr20 61799864 61800428 -4867577 - L1MC4a LINE L1 -1918 5890 5268 1959 140 64 17 chr20 61800428 61800786 -4867219 + THE1C LTR MaLR 1 375 0 725 301 138 43 chr20 61800786 61800803 -4867202 - L1MC4a LINE L1 -2540 5268 5254 252 0 0 0 chr20 61800877 61800905 -4867100 + (A)n Simple_repeat Simple_repeat 1 28 0 211 296 82 66 chr20 61803340 61803536 -4864469 + L2 LINE L2 3063 3261 -11 289 301 29 22 chr20 61803601 61803737 -4864268 + MER5A DNA MER1_type 2 138 -51 * 454 202 39 19 chr20 61803635 61803739 -4864266 - MER5A DNA MER1_type -23 166 61 2235 93 6 6 chr20 61803756 61804067 -4863938 - AluSx SINE Alu -1 311 1 223 254 16 32 chr20 61804069 61804132 -4863873 + MER5A DNA MER1_type 128 189 0 326 297 93 17 chr20 61804348 61804466 -4863539 - L2 LINE L2 0 3272 3146 607 221 77 0 chr20 61804893 61805064 -4862941 + MER5A DNA MER1_type 4 189 0 433 231 201 42 chr20 61805249 61805727 -4862278 - MLT2F LTR ERVL -55 608 11 329 288 50 14 chr20 61805816 61805955 -4862050 - Charlie8 DNA MER1_type -2213 204 61 5823 126 24 17 chr20 61805981 61806943 -4861062 - LTR5 LTR ERVK 0 969 1 361 314 0 9 chr20 61806975 61807080 -4860925 - MIR3 SINE MIR -53 155 52 260 309 203 8 chr20 61807240 61807363 -4860642 - MER5A DNA MER1_type -1 188 42 622 226 25 19 chr20 61807427 61807586 -4860419 + MER5B DNA MER1_type 19 178 0 909 237 106 3 chr20 61807707 61807990 -4860015 + MER33 DNA MER1_type 3 314 -10 909 165 73 12 chr20 61808094 61808258 -4859747 + MER5A DNA MER1_type 16 189 0 6127 149 16 22 chr20 61808444 61809576 -4858429 - L1MA6 LINE L1 -964 5182 4058 738 152 8 0 chr20 61809573 61809705 -4858300 + L1MA6 LINE L1 5176 5308 -838 * 368 215 0 0 chr20 61809705 61809770 -4858235 - MER2 DNA MER2_type 0 345 281 245 222 0 0 chr20 61809744 61809789 -4858216 - MER8 DNA MER2_type -60 179 135 * 284 184 0 0 chr20 61809779 61809828 -4858177 - MER2 DNA MER2_type -267 78 30 4239 152 34 4 chr20 61809848 61810305 -4857700 + L1MA6 LINE L1 5314 5804 -496 282 95 0 0 chr20 61810305 61810347 -4857658 + (CA)n Simple_repeat Simple_repeat 2 43 0 4239 152 34 4 chr20 61810347 61810644 -4857361 + L1MA6 LINE L1 5804 6091 -209 201 226 0 0 chr20 61812296 61812349 -4855656 + (ATG)n Simple_repeat Simple_repeat 2 54 0 1237 190 0 9 chr20 61812466 61812682 -4855323 - MER20 DNA MER1_type -5 214 1 507 172 0 0 chr20 61812944 61813031 -4854974 - AluJ/FRAM SINE Alu -8 304 218 2047 116 0 10 chr20 61813053 61813391 -4854614 + AluSx SINE Alu 6 312 0 239 347 61 0 chr20 61813534 61813632 -4854373 + L2 LINE L2 3163 3266 -6 319 318 63 0 chr20 61813898 61814024 -4853981 + MIR SINE MIR 116 249 -13 390 276 20 10 chr20 61814123 61814221 -4853784 + MLT1K LTR MaLR 151 249 -339 523 270 31 36 chr20 61814465 61814661 -4853344 + MLT1K LTR MaLR 394 588 0 226 354 12 0 chr20 61814671 61814753 -4853252 + CT-rich Low_complexity Low_complexity 5 87 0 546 233 121 88 chr20 61815775 61815883 -4852122 + MER113 DNA MER1_type? 30 133 -388 1799 84 19 4 chr20 61815883 61816145 -4851860 + L1MA2 LINE L1 6039 6304 0 546 233 121 88 chr20 61816145 61816423 -4851582 + MER113 DNA MER1_type? 133 429 -92 212 287 130 17 chr20 61816456 61816571 -4851434 - MIR SINE MIR -29 233 106 280 369 71 0 chr20 61816645 61816813 -4851192 - MIR SINE MIR -27 235 56 823 264 31 0 chr20 61817889 61818082 -4849923 + MIR SINE MIR 7 205 -57 211 194 0 0 chr20 61818566 61818617 -4849388 + (TTCA)n Simple_repeat Simple_repeat 1 51 0 249 237 0 0 chr20 61819320 61819379 -4848626 + L1ME4a LINE L1 6060 6118 -3 219 170 0 0 chr20 61819766 61819813 -4848192 + (CA)n Simple_repeat Simple_repeat 2 48 0 326 302 11 2 chr20 61820197 61820290 -4847715 + MIR SINE MIR 59 154 -56 311 247 59 0 chr20 61821403 61821488 -4846517 + MER103 DNA DNA 2 91 -75 198 300 14 14 chr20 61821633 61821703 -4846302 - MIR SINE MIR -184 78 9 494 323 6 6 chr20 61822006 61822173 -4845832 + MIR SINE MIR 43 209 -53 377 290 141 38 chr20 61822752 61823148 -4844857 - L2 LINE L2 0 3272 2836 305 299 0 6 chr20 61824005 61824179 -4843826 + (CA)n Simple_repeat Simple_repeat 2 174 0 215 295 29 19 chr20 61824179 61824284 -4843721 + (CATATA)n Simple_repeat Simple_repeat 3 108 0 281 296 0 11 chr20 61824284 61824463 -4843542 + (CATA)n Simple_repeat Simple_repeat 2 178 0 252 311 11 0 chr20 61824467 61824557 -4843448 + (CATATA)n Simple_repeat Simple_repeat 3 93 0 300 281 0 73 chr20 61824567 61824663 -4843342 + L1MC4 LINE L1 6614 6702 -1340 410 312 107 47 chr20 61824816 61825217 -4842788 - LTR16C LTR ERVL -2 489 65 193 315 65 9 chr20 61825498 61825606 -4842399 + MIR SINE MIR 14 127 -135 1277 243 72 76 chr20 61829360 61829953 -4838052 + MER21B LTR ERV1 24 614 -249 235 278 35 81 chr20 61830097 61830270 -4837735 + MER5A DNA MER1_type 18 182 -7 586 262 110 42 chr20 61830788 61831244 -4836761 + L2 LINE L2 2553 3056 -257 246 238 57 74 chr20 61831427 61831477 -4836528 - MLT1I LTR MaLR -27 382 333 2199 108 0 10 chr20 61831477 61831774 -4836231 - AluSx SINE Alu -18 294 1 246 238 57 74 chr20 61831774 61831845 -4836160 - MLT1I LTR MaLR -76 333 263 359 350 14 0 chr20 61833255 61833395 -4834610 - MIR SINE MIR 0 262 121 266 235 12 0 chr20 61833478 61833559 -4834446 + (TG)n Simple_repeat Simple_repeat 1 82 0 311 247 47 12 chr20 61833649 61833734 -4834271 + MIR SINE MIR 40 127 -81 290 333 60 8 chr20 61833992 61834109 -4833896 - MIR SINE MIR -28 234 112 401 233 17 42 chr20 61835584 61835704 -4832301 - MER103 DNA DNA -48 118 2 293 253 112 65 chr20 61835779 61835949 -4832056 - L2 LINE L2 -3 3310 3133 613 291 71 25 chr20 61836313 61836725 -4831280 - L1ME LINE L1 -443 5678 5242 1299 322 118 33 chr20 61836799 61837835 -4830170 - L1ME LINE L1 -1008 5138 4015 821 148 8 0 chr20 61837859 61837987 -4830018 + FLAM_C SINE Alu 10 138 -5 1110 161 0 26 chr20 61838001 61838194 -4829811 + AluJb SINE Alu 120 307 -5 311 245 58 75 chr20 61838227 61838415 -4829590 - L1ME LINE L1 -2181 3965 3781 378 295 52 74 chr20 61838618 61838762 -4829243 + L1ME3 LINE L1 5515 5661 -501 3223 120 7 79 chr20 61838762 61839322 -4828683 - MER1A DNA MER1_type -4 523 4 378 295 52 74 chr20 61839322 61839617 -4828388 + L1ME3 LINE L1 5661 5945 -217 191 304 0 0 chr20 61840147 61840193 -4827812 + L2 LINE L2 3216 3261 -11 880 195 26 71 chr20 61840758 61840984 -4827021 + MER20 DNA MER1_type 4 219 0 273 328 0 0 chr20 61841224 61841288 -4826717 - L2 LINE L2 0 3272 3209 851 235 122 40 chr20 61841498 61841851 -4826154 - MLT1D LTR MaLR -123 382 1 207 139 0 0 chr20 61841886 61841922 -4826083 + (T)n Simple_repeat Simple_repeat 1 36 0 579 209 235 0 chr20 61842119 61842272 -4825733 - MER5A DNA MER1_type 0 189 1 488 270 172 20 chr20 61842613 61842817 -4825188 + MIR SINE MIR 28 262 0 955 201 101 0 chr20 61843982 61844181 -4823824 - MER20 DNA MER1_type 0 219 1 184 366 99 0 chr20 61845071 61845142 -4822863 + L3b LINE CR1 1473 1550 -33 223 319 22 37 chr20 61845466 61845601 -4822404 - MIR SINE MIR -113 149 17 634 277 6 24 chr20 61846089 61846255 -4821750 + MIR SINE MIR 10 172 -90 245 331 12 0 chr20 61846319 61846417 -4821588 + MIR SINE MIR 41 141 -67 222 37 0 0 chr20 61847247 61847274 -4820731 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1824 119 4 0 chr20 61847276 61847519 -4820486 - AluSx SINE Alu -32 280 37 280 287 53 11 chr20 61847656 61847750 -4820255 - L2 LINE L2 0 3272 3175 308 356 10 0 chr20 61848351 61848452 -4819553 - MIR SINE MIR -113 149 48 200 239 183 0 chr20 61848940 61849011 -4818994 + L2 LINE L2 3162 3245 -27 666 306 152 26 chr20 61849091 61849792 -4818213 + L2 LINE L2 2256 3053 -219 876 265 55 4 chr20 61849800 61850038 -4817967 - MIR SINE MIR -4 258 9 536 207 9 43 chr20 61850139 61850255 -4817750 + L2 LINE L2 3160 3271 -1 188 219 16 78 chr20 61851968 61852032 -4815973 + L2 LINE L2 3254 3313 0 439 281 31 0 chr20 61852708 61852836 -4815169 - MIR SINE MIR -118 144 13 207 0 0 0 chr20 61853112 61853135 -4814870 + (TGGG)n Simple_repeat Simple_repeat 3 25 0 228 174 22 0 chr20 61853513 61853559 -4814446 + LTR33A LTR ERVL 474 520 -3 2308 89 7 20 chr20 61853935 61854237 -4813768 - AluSg SINE Alu -3 307 10 300 255 77 86 chr20 61854313 61854443 -4813562 + MIR SINE MIR 20 149 -59 351 252 88 100 chr20 61854832 61855082 -4812923 - MIR SINE MIR 0 262 16 202 311 134 25 chr20 61855793 61855912 -4812093 + MIR SINE MIR 8 139 -123 183 213 85 0 chr20 61855940 61855987 -4812018 + MIR SINE MIR 197 247 -15 1723 210 61 99 chr20 61856978 61857122 -4810883 - L1MDa LINE L1 -4287 2253 2105 2021 134 0 3 chr20 61857122 61857442 -4810563 + AluJb SINE Alu 1 319 0 1723 210 61 99 chr20 61857442 61858052 -4809953 - L1MDa LINE L1 -4435 2105 1527 228 362 38 0 chr20 61858754 61858859 -4809146 + MIR SINE MIR 84 192 -70 562 256 83 24 chr20 61859561 61859975 -4808030 - MER113 DNA MER1_type? -54 467 1 334 286 177 52 chr20 61860383 61860768 -4807237 + MLT1K LTR MaLR 126 558 -30 261 295 62 4 chr20 61860839 61861008 -4806997 + MIR SINE MIR 6 242 -20 318 132 0 0 chr20 61861116 61861169 -4806836 + (TG)n Simple_repeat Simple_repeat 1 53 0 602 260 82 46 chr20 61862295 61862521 -4805484 - MER113 DNA MER1_type? -68 453 212 2656 194 24 2 chr20 61862521 61863025 -4804980 - L1MC1 LINE L1 -5 6328 5814 602 260 82 46 chr20 61863025 61863102 -4804903 - MER113 DNA MER1_type? -309 212 139 848 230 90 13 chr20 61863347 61863682 -4804323 - L1MC4a LINE L1 -186 5935 5567 180 0 0 0 chr20 61863939 61863959 -4804046 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 4493 14 0 0 chr20 61863962 61864463 -4803542 - L1PA3 LINE L1 -14 6141 5641 318 0 0 0 chr20 61864463 61864499 -4803506 + L1PA3 LINE L1 5591 5626 -528 396 0 0 0 chr20 61865270 61865314 -4802691 + (TTTTC)n Simple_repeat Simple_repeat 2 45 0 273 359 66 14 chr20 61866447 61866659 -4801346 + MIR SINE MIR 19 241 -21 340 321 28 0 chr20 61867664 61867770 -4800235 - L2 LINE L2 -10 3262 3154 1123 214 0 0 chr20 61867770 61867985 -4800020 + MER58A DNA MER1_type 10 224 0 1116 208 43 0 chr20 61867998 61868277 -4799728 - MER33 DNA MER1_type -5 319 29 236 345 12 0 chr20 61868410 61868494 -4799511 - MIR SINE MIR -89 173 89 502 237 43 0 chr20 61869122 61869261 -4798744 + MER45A DNA AcHobo 34 178 0 2439 159 26 14 chr20 61869496 61869917 -4798088 - MSTB LTR MaLR 0 426 1 850 141 0 0 chr20 61870202 61870337 -4797668 - AluSg/x SINE Alu -7 303 169 286 267 175 25 chr20 61870621 61870741 -4797264 + L2 LINE L2 3133 3270 -2 1434 244 7 0 chr20 61870790 61871081 -4796924 - AluJo SINE Alu -19 293 1 2293 104 17 0 chr20 61871144 61871443 -4796562 + AluSx SINE Alu 1 304 -8 527 265 82 53 chr20 61871880 61872235 -4795770 - L1MC4a LINE L1 -1880 5928 5564 454 282 112 38 chr20 61872288 61872639 -4795366 - MLT1K LTR MaLR -10 605 194 835 222 0 12 chr20 61872743 61872914 -4795091 + MER45A DNA AcHobo 3 171 -7 250 279 18 54 chr20 61873042 61873153 -4794852 + MIR3 SINE MIR 100 206 -2 6399 134 54 40 chr20 61873269 61873999 -4794006 + Tigger3b DNA MER2_type 1 756 -2272 2125 130 14 0 chr20 61873999 61874291 -4793714 - AluSx SINE Alu -16 296 1 6399 134 54 40 chr20 61874291 61874774 -4793231 + Tigger3b DNA MER2_type 756 1231 0 559 115 0 0 chr20 61875113 61875191 -4792814 + MADE1 DNA Mariner 3 80 0 499 227 0 45 chr20 61875848 61876002 -4792003 - LTR16A LTR ERVL -158 292 146 557 307 94 39 chr20 61877405 61877786 -4790219 + L2 LINE L2 2912 3313 0 185 399 84 17 chr20 61877805 61878043 -4789962 - L2 LINE L2 -8 3264 3011 875 179 99 10 chr20 61878910 61879111 -4788894 + MLT1C LTR MaLR 6 224 -243 293 280 53 58 chr20 61879381 61879570 -4788435 + MER65A LTR ERV1 249 436 -9 * 768 213 41 10 chr20 61879568 61879765 -4788240 + MLT1C LTR MaLR 250 452 -15 589 188 115 62 chr20 61881021 61881229 -4786776 + MER20 DNA MER1_type 1 219 0 260 267 160 38 chr20 61882695 61882826 -4785179 + MIR SINE MIR 7 153 -109 396 246 33 16 chr20 61883011 61883133 -4784872 - LTR67 LTR ERVL -3 554 431 1076 150 35 57 chr20 61885005 61885076 -4782929 - L1MA8 LINE L1 0 6291 6220 2304 80 14 0 chr20 61885076 61885365 -4782640 + AluY SINE Alu 2 294 -17 1076 150 35 57 chr20 61885365 61885520 -4782485 - L1MA8 LINE L1 -71 6220 6070 216 97 0 0 chr20 61885768 61885799 -4782206 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 226 310 65 10 chr20 61886537 61886688 -4781317 - MIR SINE MIR -53 155 10 273 286 99 42 chr20 61887517 61887709 -4780296 - MIR SINE MIR -36 226 24 258 292 149 0 chr20 61888009 61888177 -4779828 - MIR SINE MIR -15 247 55 180 239 0 0 chr20 61888199 61888245 -4779760 - L2 LINE L2 -1 3312 3267 525 303 74 22 chr20 61889244 61889475 -4778530 + MIR SINE MIR 20 262 0 342 0 0 0 chr20 61890199 61890237 -4777768 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 311 276 10 31 chr20 61890932 61891030 -4776975 - MLT2E LTR ERVL -501 127 32 893 227 79 0 chr20 61891484 61891700 -4776305 + MLT2B3 LTR ERVL 1 233 -321 756 142 0 0 chr20 61891770 61891883 -4776122 + L1MC/D LINE L1 5498 5610 -632 1517 190 17 10 chr20 61891884 61892174 -4775831 + MLT2B3 LTR ERVL 250 541 -13 2266 125 0 0 chr20 61892208 61892520 -4775485 + AluSx SINE Alu 1 312 0 606 372 11 3 chr20 61892824 61893106 -4774899 - ERVL LTR ERVL -843 4921 4638 5182 207 26 34 chr20 61893128 61894770 -4773235 + L1MD2 LINE L1 4735 6359 0 23 54 0 0 chr20 61895021 61895058 -4772947 + AT_rich Low_complexity Low_complexity 1 37 0 616 260 16 76 chr20 61895183 61895487 -4772518 + L1ME LINE L1 5534 5819 -302 240 323 141 0 chr20 61896122 61896221 -4771784 + L2 LINE L2 3159 3271 -1 1865 239 62 14 chr20 61896707 61897226 -4770779 - L1MC3 LINE L1 -2 7783 7240 234 300 0 0 chr20 61897228 61897298 -4770707 - L2 LINE L2 -562 2752 2683 1539 214 112 27 chr20 61898781 61899192 -4768813 + MLT2B1 LTR ERVL 1 446 -74 2144 135 3 3 chr20 61899193 61899505 -4768500 - AluSx SINE Alu 0 312 1 297 0 0 0 chr20 61899544 61899577 -4768428 + (TG)n Simple_repeat Simple_repeat 2 34 0 315 253 11 22 chr20 61899577 61899668 -4768337 + L1MC4 LINE L1 6614 6703 -1339 301 131 33 0 chr20 61899669 61899730 -4768275 + (TA)n Simple_repeat Simple_repeat 1 63 0 355 78 20 0 chr20 61899732 61899783 -4768222 + MLT2B1 LTR ERVL 465 516 -4 1441 231 41 65 chr20 61899857 61900316 -4767689 + MER101 LTR ERV1 11 458 -16 3548 88 72 4 chr20 61900608 61901106 -4766899 + L1MA2 LINE L1 5773 6304 0 224 277 77 0 chr20 61901218 61901283 -4766722 - MIR SINE MIR -88 174 105 214 186 23 0 chr20 61901650 61901693 -4766312 - L2 LINE L2 -81 3191 3148 533 92 53 0 chr20 61902341 61902417 -4765588 - MADE1 DNA Mariner 0 80 1 206 300 144 0 chr20 61902690 61902780 -4765225 - L2 LINE L2 -31 3282 3180 34 65 0 0 chr20 61902879 61902941 -4765064 + AT_rich Low_complexity Low_complexity 1 62 0 1095 206 52 0 chr20 61903496 61903744 -4764261 - LTR43 LTR ERV1 -166 436 176 267 287 66 81 chr20 61904570 61904842 -4763163 - L1ME LINE L1 -467 5654 5387 1941 155 74 104 chr20 61905261 61905733 -4762272 + LTR32 LTR ERVL 13 470 -1 180 275 0 0 chr20 61906035 61906075 -4761930 - L2 LINE L2 -16 3297 3258 864 213 44 11 chr20 61906235 61906418 -4761587 - MER5A DNA MER1_type 0 189 1 186 314 87 30 chr20 61906429 61906674 -4761331 - MIR SINE MIR 0 262 7 229 266 89 16 chr20 61906723 61906847 -4761158 - L1MCa LINE L1 -4236 2190 2058 3030 251 87 64 chr20 61906912 61908216 -4759789 - L1MCa LINE L1 -4941 1485 144 1234 215 179 38 chr20 61908216 61908663 -4759342 - LTR54 LTR ERV1 0 510 1 3030 251 87 64 chr20 61908663 61908794 -4759211 - L1MCa LINE L1 -6282 144 17 3262 191 4 2 chr20 61908984 61909535 -4758470 + MER41D LTR ERV1 6 557 0 212 312 64 18 chr20 61910806 61910915 -4757090 + L2 LINE L2 2277 2390 -924 402 306 8 0 chr20 61910915 61911039 -4756966 + L2 LINE L2 2934 3058 -255 1118 194 61 82 chr20 61911083 61911162 -4756843 + MLT1B LTR MaLR 22 101 -289 2648 92 157 5 chr20 61911162 61911551 -4756454 + LTR7 LTR ERV1 1 448 -2 1118 194 61 82 chr20 61911551 61911668 -4756337 + MLT1B LTR MaLR 101 219 -171 5759 126 45 9 chr20 61911668 61912538 -4755467 - MER4D LTR ERV1 -2 901 1 1118 194 61 82 chr20 61912538 61912717 -4755288 + MLT1B LTR MaLR 219 390 0 3567 177 58 9 chr20 61913723 61914401 -4753604 + MER50 LTR ERV1 1 711 -23 271 272 80 62 chr20 61916345 61916507 -4751498 - L3 LINE CR1 -14 1563 1399 3100 255 78 27 chr20 61916973 61918511 -4749494 - L1ME2 LINE L1 -1 6958 5313 1761 170 50 6 chr20 61918560 61918887 -4749118 + MER7A DNA MER2_type 7 346 0 3994 272 94 28 chr20 61918889 61921322 -4746683 - L1ME2 LINE L1 -1680 5261 2705 2048 101 33 0 chr20 61921322 61921598 -4746407 - AluSc SINE Alu -20 289 5 3994 272 94 28 chr20 61921598 61921725 -4746280 - L1ME2 LINE L1 -4236 2705 2588 1130 292 65 26 chr20 61921767 61922304 -4745701 - L1ME2 LINE L1 -4682 2440 1926 3531 118 10 2 chr20 61922304 61922804 -4745201 + L1PA13 LINE L1 5655 6158 -5 1130 292 65 26 chr20 61922804 61923283 -4744722 - L1ME2 LINE L1 -5196 1926 1171 243 96 0 0 chr20 61923714 61923752 -4744253 + L1P4 LINE L1 5754 5791 -374 201 291 0 0 chr20 61923821 61923907 -4744098 + GA-rich Low_complexity Low_complexity 3 88 0 258 325 60 24 chr20 61923916 61924082 -4743923 + MLT1K LTR MaLR 412 583 -5 1428 208 60 36 chr20 61924143 61924475 -4743530 + MER58B DNA MER1_type 2 341 0 198 352 70 23 chr20 61924741 61924869 -4743136 + MIR SINE MIR 70 203 -59 637 270 28 0 chr20 61925332 61925513 -4742492 + L1ME3A LINE L1 5642 5831 -332 396 250 83 0 chr20 61925591 61925711 -4742294 + L1ME3A LINE L1 6032 6161 -9 334 314 54 75 chr20 61927081 61927361 -4740644 + L2 LINE L2 2919 3192 -80 2181 116 0 3 chr20 61927519 61927821 -4740184 + AluSx SINE Alu 1 301 -11 738 310 83 10 chr20 61927914 61928311 -4739694 + L1ME4a LINE L1 5591 6016 -105 1331 256 87 111 chr20 61928421 61929758 -4738247 + L1MC5 LINE L1 6292 7605 -356 304 187 16 53 chr20 61929789 61929976 -4738029 + (TA)n Simple_repeat Simple_repeat 1 180 0 320 219 44 77 chr20 61930039 61930222 -4737783 + L1MC5 LINE L1 7570 7746 -215 341 295 43 22 chr20 61930330 61930469 -4737536 - HAL1 LINE L1 -1190 1317 1176 578 216 145 85 chr20 61931244 61931668 -4736337 - MLT1K LTR MaLR -63 525 5 348 298 49 58 chr20 61933562 61933767 -4734238 + MLT1L LTR MaLR 409 611 -4 375 268 158 14 chr20 61934461 61934670 -4733335 - MLT1L LTR MaLR -234 381 143 773 253 99 54 chr20 61934925 61934957 -4733048 + MLT1H LTR MaLR 203 232 -317 1678 183 40 60 chr20 61934957 61935355 -4732650 + MLT1B LTR MaLR 1 390 0 773 253 99 54 chr20 61935355 61935654 -4732351 + MLT1H LTR MaLR 232 549 0 788 251 75 35 chr20 61935977 61936232 -4731773 - Charlie8 DNA MER1_type -2152 265 1 192 40 0 0 chr20 61936678 61936703 -4731302 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 301 264 102 28 chr20 61936784 61936986 -4731019 + MIR SINE MIR 36 252 -10 2430 65 3 36 chr20 61937944 61938252 -4729753 + AluY SINE Alu 1 298 -13 357 273 10 0 chr20 61938642 61938741 -4729264 - MER94 DNA DNA -34 100 1 462 193 37 0 chr20 61938774 61938883 -4729122 - Charlie5 DNA MER1_type -29 2583 2471 1330 89 28 11 chr20 61938883 61939062 -4728943 - AluSq SINE Alu -118 195 14 378 175 0 0 chr20 61939062 61939125 -4728880 + AluS SINE Alu 232 294 -8 824 207 23 23 chr20 61939128 61939354 -4728651 - MER33 DNA MER1_type -250 74 1 8018 127 20 25 chr20 61939591 61940892 -4727113 - HSMAR2 DNA Mariner 0 1302 9 25 31 0 0 chr20 61940900 61940932 -4727073 + AT_rich Low_complexity Low_complexity 1 32 0 1122 210 122 20 chr20 61941064 61941473 -4726532 - L1MC5 LINE L1 -237 7724 7274 192 77 0 0 chr20 61941521 61941547 -4726458 + (TG)n Simple_repeat Simple_repeat 1 26 0 329 294 0 10 chr20 61941547 61941649 -4726356 + GA-rich Low_complexity Low_complexity 2 102 0 864 261 73 59 chr20 61941655 61942131 -4725874 - L1MC5 LINE L1 -737 7224 6742 271 245 80 50 chr20 61942170 61942370 -4725635 - MLT1K LTR MaLR 0 588 383 229 246 130 0 chr20 61942647 61942716 -4725289 - MLT1K LTR MaLR -196 392 315 601 207 43 0 chr20 61943183 61943299 -4724706 - MER45A DNA AcHobo 0 178 58 409 328 33 6 chr20 61943456 61943636 -4724369 + MIR SINE MIR 1 185 -77 1554 161 24 0 chr20 61944477 61944768 -4723237 - L1MB3 LINE L1 0 6183 5886 802 292 43 26 chr20 61944990 61945411 -4722594 - L1ME3 LINE L1 -43 6119 5692 2200 97 0 0 chr20 61946599 61946908 -4721097 - AluSg SINE Alu 0 309 1 252 228 18 0 chr20 61947041 61947098 -4720907 - MER116 DNA Mariner -9 71 14 342 280 75 0 chr20 61947617 61947724 -4720281 + L2 LINE L2 3197 3311 -2 1518 265 95 66 chr20 61948060 61948478 -4719527 - L1ME3A LINE L1 -105 6459 6055 912 245 93 57 chr20 61948478 61948919 -4719086 - LTR16A1 LTR ERVL 0 457 1 1518 265 95 66 chr20 61948919 61949659 -4718346 - L1ME3A LINE L1 -509 6055 5338 1131 172 9 32 chr20 61949659 61949880 -4718125 + MER20 DNA MER1_type 1 216 -3 1518 265 95 66 chr20 61949880 61950265 -4717740 - L1ME3A LINE L1 -1226 5338 4966 3809 40 0 0 chr20 61950265 61950714 -4717291 - L1PA3 LINE L1 -3 6152 5704 1518 265 95 66 chr20 61950714 61951068 -4716937 - L1ME3A LINE L1 -1598 4966 4503 569 189 0 0 chr20 61951075 61951170 -4716835 - AluJ/FLAM SINE Alu -216 96 2 482 266 48 10 chr20 61951170 61951377 -4716628 - L1ME3A LINE L1 -2978 3562 3348 1116 304 67 22 chr20 61951418 61952319 -4715686 - L1MEd LINE L1 -3435 3105 2202 347 304 5 60 chr20 61952458 61952675 -4715330 - L1MEd LINE L1 -4726 1995 1791 21 0 0 0 chr20 61952710 61952731 -4715274 + AT_rich Low_complexity Low_complexity 1 21 0 320 300 83 37 chr20 61952782 61953283 -4714722 - L1MEd LINE L1 -4746 1794 1262 233 368 9 0 chr20 61954384 61954498 -4713507 - MIR SINE MIR -96 166 52 665 237 47 30 chr20 61954552 61954721 -4713284 - L1MD2 LINE L1 -35 6324 6153 1256 188 80 11 chr20 61954721 61954997 -4713008 + MLT1A1 LTR MaLR 1 295 -70 1312 224 53 17 chr20 61954999 61955443 -4712562 + MER39 LTR ERV1 193 707 0 1304 249 68 0 chr20 61955444 61955770 -4712235 - L1MD2 LINE L1 -217 6142 5795 362 268 263 16 chr20 61956620 61956810 -4711195 - MIR SINE MIR -12 250 14 607 211 122 14 chr20 61957015 61957405 -4710600 + LTR54B LTR ERV1 1 490 -20 717 244 21 43 chr20 61957453 61957687 -4710318 - MIR SINE MIR -3 259 31 20334 133 22 8 chr20 61960227 61964357 -4703648 - L1PA10 LINE L1 -1 6482 2312 3182 224 15 69 chr20 61964344 61965715 -4702290 - L1PA10 LINE L1 -4957 1504 8 * 715 231 153 84 chr20 61966043 61966523 -4701482 - MLT1K LTR MaLR -9 579 23 1959 193 55 10 chr20 61967502 61967906 -4700099 - L1MC3 LINE L1 -9 7776 7355 432 306 20 15 chr20 61967929 61968128 -4699877 - MIR SINE MIR -2 260 61 2119 112 7 14 chr20 61968908 61969204 -4698801 - AluJb SINE Alu -18 294 1 21 36 0 0 chr20 61969270 61969298 -4698707 + AT_rich Low_complexity Low_complexity 1 28 0 293 189 27 0 chr20 61970296 61970370 -4697635 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 2810 190 8 4 chr20 61970371 61970893 -4697112 - L1MB4 LINE L1 -72 6108 5585 22 0 0 0 chr20 61970966 61970988 -4697017 + AT_rich Low_complexity Low_complexity 1 22 0 491 291 144 22 chr20 61971008 61971451 -4696554 - L2 LINE L2 -13 3300 2913 1679 147 112 95 chr20 61971451 61971492 -4696513 - MSTA LTR MaLR 0 428 389 2335 103 0 25 chr20 61971492 61971811 -4696194 + AluSx SINE Alu 1 311 -1 1679 147 112 95 chr20 61971811 61971847 -4696158 - MSTA LTR MaLR -39 389 355 2257 96 3 0 chr20 61971847 61972139 -4695866 - AluY SINE Alu -18 293 1 1679 147 112 95 chr20 61972139 61972481 -4695524 - MSTA LTR MaLR -73 355 1 491 291 144 22 chr20 61972481 61972640 -4695365 - L2 LINE L2 -400 2913 2634 789 326 48 25 chr20 61974478 61975037 -4692968 + HAL1 LINE L1 1167 1738 -769 204 40 0 0 chr20 61975174 61975199 -4692806 + (TG)n Simple_repeat Simple_repeat 2 26 0 297 301 55 42 chr20 61975370 61975595 -4692410 - L1ME LINE L1 -340 5781 5551 1790 169 6 16 chr20 61975595 61975908 -4692097 - AluJo SINE Alu -2 310 1 364 261 82 0 chr20 61978670 61978804 -4689201 + MER117 DNA MER1_type 22 166 -31 289 330 0 0 chr20 61979744 61979844 -4688161 - MIR SINE MIR -49 213 114 417 297 26 12 chr20 61980917 61981132 -4686873 + MIR SINE MIR 12 228 -34 265 350 56 0 chr20 61981283 61981443 -4686562 + L1MC4a LINE L1 5798 5966 -1842 2040 120 21 0 chr20 61981560 61981843 -4686162 - AluSq SINE Alu -6 307 19 184 347 107 16 chr20 61981889 61982010 -4685995 - MER5A DNA MER1_type -52 137 6 2000 167 31 0 chr20 61982307 61982630 -4685375 + MER2 DNA MER2_type 13 345 0 233 318 30 0 chr20 61982678 61982744 -4685261 + MLT1L LTR MaLR 352 419 -196 226 247 93 62 chr20 61982785 61982882 -4685123 + MLT1L LTR MaLR 508 607 -8 371 333 0 17 chr20 61982887 61983007 -4684998 + MIR SINE MIR 24 141 -67 1873 162 0 0 chr20 61983015 61983311 -4684694 + AluSx SINE Alu 1 296 -16 2837 175 25 23 chr20 61983346 61983983 -4684022 - L1M LINE L1 -743 5403 4782 188 247 59 59 chr20 61984046 61984131 -4683874 + L2 LINE L2 3185 3269 -3 234 210 177 0 chr20 61984915 61984977 -4683028 + MIR3 SINE MIR 88 160 -48 978 149 51 51 chr20 61984978 61985192 -4682813 - MER20 DNA MER1_type -1 218 5 1783 257 67 19 chr20 61985386 61985957 -4682048 - L1ME3A LINE L1 -1 6238 5641 792 259 87 11 chr20 61985959 61986245 -4681760 + L1ME LINE L1 5285 5592 -572 190 343 46 19 chr20 61987216 61987324 -4680681 - L2 LINE L2 -50 3222 3112 414 291 180 28 chr20 61987362 61987833 -4680172 - L2 LINE L2 -245 3068 2521 254 336 0 29 chr20 61987893 61987997 -4680008 - MIR SINE MIR -43 219 119 1077 182 55 5 chr20 61988014 61988234 -4679771 - MER66B LTR ERV1 0 486 256 185 0 0 39 chr20 61988234 61988260 -4679745 + (TTTAA)n Simple_repeat Simple_repeat 1 25 0 450 103 0 0 chr20 61988261 61988319 -4679686 - Alu SINE Alu -25 285 228 408 290 70 15 chr20 61988821 61989021 -4678984 - MIR SINE MIR -1 261 51 212 245 153 20 chr20 61989061 61989159 -4678846 + L2 LINE L2 3162 3272 0 758 233 12 17 chr20 61989414 61989586 -4678419 + MLT1C LTR MaLR 126 296 -69 784 236 0 39 chr20 61989589 61989803 -4678202 - AluJb SINE Alu 0 324 118 918 201 10 16 chr20 61989930 61990124 -4677881 + MLT1C LTR MaLR 275 467 0 180 111 0 0 chr20 61990833 61990860 -4677145 + (GAAAA)n Simple_repeat Simple_repeat 2 28 0 773 155 6 2 chr20 61991009 61991185 -4676820 - MER2 DNA MER2_type -135 210 1 227 308 53 0 chr20 61991253 61991386 -4676619 - L1ME LINE L1 -197 5924 5785 261 224 47 12 chr20 61991618 61991703 -4676302 - L1ME3A LINE L1 -2339 5538 5451 266 297 35 55 chr20 61991733 61991937 -4676068 - L1ME3A LINE L1 -816 5399 5201 1670 152 14 17 chr20 61991937 61992233 -4675772 - AluJo SINE Alu -17 295 1 266 297 35 55 chr20 61992233 61992318 -4675687 - L1ME3A LINE L1 -1014 5201 5116 564 268 44 25 chr20 61992340 61992537 -4675468 + MIR SINE MIR 64 262 0 431 332 115 23 chr20 61992538 61992930 -4675075 - L1ME3A LINE L1 -1103 5112 4685 403 319 78 70 chr20 61993429 61993699 -4674306 - L1ME3A LINE L1 -4092 2304 2033 1979 103 20 20 chr20 61993769 61994069 -4673936 - AluSx SINE Alu -12 300 1 443 340 73 7 chr20 61994277 61994580 -4673425 - L1ME3A LINE L1 -4671 1725 1403 463 291 110 99 chr20 61994619 61995093 -4672912 - HAL1 LINE L1 -1180 1327 849 271 313 68 18 chr20 61995178 61995341 -4672664 - L1ME3A LINE L1 -5556 649 479 264 298 34 22 chr20 61995560 61995738 -4672267 - L1MEd LINE L1 -4876 1243 1064 835 213 13 80 chr20 61995743 61995968 -4672037 + MER20 DNA MER1_type 10 219 0 304 336 25 0 chr20 61995970 61996089 -4671916 + L2 LINE L2 3150 3271 -1 305 290 52 84 chr20 61996111 61996266 -4671739 - L1MC/D LINE L1 -2337 5471 5322 210 318 139 8 chr20 61996442 61996571 -4671434 + MER91A DNA MER1_type 19 164 -32 249 370 111 70 chr20 61997296 61997566 -4670439 + L2 LINE L2 2917 3197 -75 365 266 73 18 chr20 61998413 61998631 -4669374 - L1ME4a LINE L1 -267 6090 5861 251 266 55 18 chr20 61998818 61998927 -4669078 - L1ME4a LINE L1 -2441 5603 5491 21 0 0 0 chr20 61999085 61999106 -4668899 + AT_rich Low_complexity Low_complexity 1 21 0 552 207 0 0 chr20 61999112 61999223 -4668782 - L1MA7 LINE L1 -6 6285 6175 586 323 108 42 chr20 61999419 61999893 -4668112 - L1ME4a LINE L1 -1430 4952 4448 356 284 35 59 chr20 62000023 62000192 -4667813 - L1ME4a LINE L1 -2136 4246 4082 349 271 105 34 chr20 62000214 62000463 -4667542 - L1ME4a LINE L1 -3863 2519 2253 368 270 107 25 chr20 62000792 62000951 -4667054 - MLT1J LTR MaLR -202 309 138 275 324 52 66 chr20 62001823 62002036 -4665969 + MIR SINE MIR 12 221 -41 277 289 22 0 chr20 62002741 62002831 -4665174 - MLT1G1 LTR MaLR 0 595 504 * 740 265 52 62 chr20 62002823 62003114 -4664891 - MLT1G1 LTR MaLR -193 402 115 1297 191 112 16 chr20 62003597 62003900 -4664105 + MLT1A1 LTR MaLR 1 332 -33 417 218 69 0 chr20 62004242 62004329 -4663676 + L2 LINE L2 3205 3297 -16 578 225 0 0 chr20 62004402 62004513 -4663492 + MER81 DNA DNA 4 114 0 390 289 225 11 chr20 62006104 62006291 -4661714 + MIR SINE MIR 17 243 -19 2136 204 10 26 chr20 62006459 62006949 -4661056 + L1MB7 LINE L1 5694 6175 -9 710 204 37 0 chr20 62007340 62007502 -4660503 + L1MD3 LINE L1 7824 7991 -4 677 237 47 39 chr20 62007779 62008036 -4659969 + LTR16C LTR ERVL 233 491 0 1647 237 62 27 chr20 62008178 62008616 -4659389 - MLT1C LTR MaLR -9 458 6 289 313 7 20 chr20 62009224 62009371 -4658634 + GA-rich Low_complexity Low_complexity 3 147 0 195 272 0 0 chr20 62009454 62009568 -4658437 + GA-rich Low_complexity Low_complexity 1 114 0 359 208 111 90 chr20 62010901 62011045 -4656960 + MER5A DNA MER1_type 10 156 -33 231 175 133 133 chr20 62010940 62011060 -4656945 - MER5A DNA MER1_type -35 154 35 * 300 250 0 66 chr20 62011113 62011189 -4656816 + MIR SINE MIR 32 102 -160 2124 122 0 0 chr20 62011189 62011492 -4656513 - AluSq SINE Alu -2 311 9 323 254 71 73 chr20 62011856 62012106 -4655899 + MLT1G1 LTR MaLR 4 213 -342 2264 88 3 0 chr20 62012166 62012473 -4655532 - AluY SINE Alu -3 308 1 348 164 23 39 chr20 62012582 62012710 -4655295 + CT-rich Low_complexity Low_complexity 2 127 0 1917 142 80 14 chr20 62013068 62013420 -4654585 - THE1C LTR MaLR 0 375 1 197 173 0 135 chr20 62014006 62014058 -4653947 + L2 LINE L2 3181 3225 -88 281 338 25 19 chr20 62014265 62014425 -4653580 - MIR SINE MIR -99 163 3 * 694 230 32 3 chr20 62014421 62014594 -4653411 - MER5A DNA MER1_type -3 175 5 238 378 0 0 chr20 62014885 62014975 -4653030 + CT-rich Low_complexity Low_complexity 4 93 0 1076 271 117 29 chr20 62015239 62015693 -4652312 + MLT1E2 LTR MaLR 128 621 -5 302 324 108 0 chr20 62015785 62015924 -4652081 + MIR SINE MIR 108 261 -1 300 330 74 37 chr20 62016502 62016717 -4651288 + MIR SINE MIR 30 252 -10 309 301 67 42 chr20 62017640 62017879 -4650126 - LTR16C LTR ERVL -62 429 185 1223 247 41 21 chr20 62018734 62019187 -4648818 + L1MC4 LINE L1 7589 7995 0 2412 67 0 0 chr20 62019198 62019495 -4648510 + AluY SINE Alu 1 297 -14 281 278 23 98 chr20 62020921 62021054 -4646951 - L2 LINE L2 0 3272 3150 726 261 38 0 chr20 62021649 62021860 -4646145 + MER20 DNA MER1_type 1 219 0 509 275 73 17 chr20 62021880 62022058 -4645947 - MIR SINE MIR -58 204 17 396 0 0 0 chr20 62023788 62023832 -4644173 + (TG)n Simple_repeat Simple_repeat 2 45 0 2016 131 0 0 chr20 62024276 62024566 -4643439 - AluSx SINE Alu -22 290 1 405 312 0 45 chr20 62024701 62024855 -4643150 - LTR67 LTR ERVL -8 549 403 444 310 112 11 chr20 62025561 62025748 -4642257 + MIR SINE MIR 47 252 -10 193 241 38 25 chr20 62025834 62025913 -4642092 + MER5C DNA MER1_type 156 235 -89 343 255 70 124 chr20 62025922 62026181 -4641824 - MIR SINE MIR -7 255 11 198 0 0 0 chr20 62026425 62026447 -4641558 + (A)n Simple_repeat Simple_repeat 1 22 0 2041 92 7 18 chr20 62027219 62027503 -4640502 + AluSg SINE Alu 27 307 -3 446 281 25 46 chr20 62030543 62030739 -4637266 + MER20 DNA MER1_type 27 218 -1 239 218 192 0 chr20 62030771 62030849 -4637156 + MIR SINE MIR 48 140 -122 201 214 0 0 chr20 62031036 62031078 -4636927 + L2 LINE L2 2725 2766 -548 455 338 84 25 chr20 62031781 62032104 -4635901 + L2 LINE L2 2972 3313 0 456 264 62 14 chr20 62033052 62033196 -4634809 + MIR SINE MIR 40 190 -72 623 259 197 0 chr20 62035266 62035459 -4632546 + MIR SINE MIR 7 237 -25 2035 116 13 7 chr20 62035470 62035773 -4632232 - AluSx SINE Alu -7 305 1 1833 129 0 21 chr20 62035941 62036257 -4631748 + AluSg SINE Alu 1 310 0 198 71 0 0 chr20 62038640 62038668 -4629337 + (CA)n Simple_repeat Simple_repeat 1 28 0 274 256 0 13 chr20 62038689 62038767 -4629238 + (CA)n Simple_repeat Simple_repeat 1 77 0 941 196 88 20 chr20 62038919 62039123 -4628882 + MER20 DNA MER1_type 2 219 0 21 0 0 0 chr20 62040180 62040201 -4627804 + AT_rich Low_complexity Low_complexity 1 21 0 1637 171 3 23 chr20 62041835 62042134 -4625871 - AluSx SINE Alu -19 293 1 3981 94 4 7 chr20 62043053 62043614 -4624391 - L1PA13 LINE L1 -3 6160 5602 285 318 108 34 chr20 62043876 62044052 -4623953 - MER5A DNA MER1_type 0 189 1 790 262 91 80 chr20 62044236 62044841 -4623164 + MER77 LTR ERV1 54 740 -4 246 300 15 15 chr20 62044991 62045121 -4622884 + (CATATA)n Simple_repeat Simple_repeat 3 132 0 2222 104 0 3 chr20 62045334 62045632 -4622373 - AluSq SINE Alu -16 297 1 202 274 200 0 chr20 62045807 62045902 -4622103 + L3 LINE CR1 1363 1476 -101 1344 120 33 4 chr20 62047002 62047243 -4620762 + MER51A-int LTR ERV1 1551 1798 -6322 25 0 0 0 chr20 62047243 62047268 -4620737 + AT_rich Low_complexity Low_complexity 1 25 0 6865 26 0 9 chr20 62047268 62048064 -4619941 - L1PA3 LINE L1 0 6155 5367 1427 136 44 15 chr20 62048064 62048524 -4619481 + MER51A-int LTR ERV1 1787 3530 -2416 1252 304 36 42 chr20 62048523 62049210 -4618795 + MER51A-int LTR ERV1 5390 6072 -1684 * 301 236 50 57 chr20 62049800 62049940 -4618065 + MER51A-int LTR ERV1 6687 6825 -1574 1617 254 50 65 chr20 62050478 62051533 -4616472 + MER51A-int LTR ERV1 7365 7816 0 4091 131 15 3 chr20 62051534 62052143 -4615862 + MER51A LTR ERV1 1 616 -18 278 234 7 37 chr20 62052175 62052335 -4615670 + GA-rich Low_complexity Low_complexity 1 155 0 1987 192 86 8 chr20 62053551 62053753 -4614252 - MSTA LTR MaLR -2 426 241 282 29 0 0 chr20 62053753 62053788 -4614217 + (GA)n Simple_repeat Simple_repeat 1 35 0 1987 192 86 8 chr20 62053788 62053980 -4614025 - MSTA LTR MaLR -187 241 1 9339 163 18 22 chr20 62053981 62055638 -4612367 - MSTA-int LTR MaLR 0 1651 1 2524 128 59 2 chr20 62055638 62056043 -4611962 - MSTA LTR MaLR 0 428 1 491 309 87 14 chr20 62056650 62056857 -4611148 + MIR SINE MIR 24 245 -17 2230 107 40 35 chr20 62056904 62057277 -4610728 + THE1C LTR MaLR 1 375 0 368 268 76 32 chr20 62058864 62059021 -4608984 - MIR SINE MIR -18 244 81 369 350 82 52 chr20 62059050 62059490 -4608515 - L3 LINE CR1 -198 1379 927 1621 166 3 7 chr20 62059795 62060103 -4607902 + AluJb SINE Alu 1 307 0 476 299 123 19 chr20 62060103 62060514 -4607491 - L2 LINE L2 -257 3015 2567 2408 52 0 7 chr20 62061675 62061984 -4606021 + AluY SINE Alu 1 307 -4 190 341 118 0 chr20 62061991 62062076 -4605929 - MIR SINE MIR -149 113 19 3050 149 56 10 chr20 62062244 62062748 -4605257 - MER1A DNA MER1_type 0 527 1 993 230 154 51 chr20 62062972 62063420 -4604585 - MLT1D LTR MaLR -7 498 5 207 274 81 0 chr20 62063423 62063485 -4604520 + MIR SINE MIR 189 255 -7 358 158 60 0 chr20 62065745 62066050 -4601955 + (TA)n Simple_repeat Simple_repeat 1 323 0 225 0 0 0 chr20 62066426 62066451 -4601554 + (TA)n Simple_repeat Simple_repeat 2 26 0 2622 265 142 88 chr20 62067017 62067803 -4600202 + L2 LINE L2 502 1244 -2070 546 54 0 0 chr20 62067803 62067877 -4600128 + (CA)n Simple_repeat Simple_repeat 2 75 0 2622 265 142 88 chr20 62067877 62069180 -4598825 + L2 LINE L2 1244 2713 -601 2053 132 0 0 chr20 62069180 62069469 -4598536 + AluSx SINE Alu 1 289 -23 2622 265 142 88 chr20 62069469 62069528 -4598477 + L2 LINE L2 2713 2767 -547 1194 167 36 36 chr20 62070157 62070409 -4597596 + AluJo SINE Alu 43 294 -18 2118 95 3 0 chr20 62071960 62072243 -4595762 + AluSc SINE Alu 1 284 -25 1899 139 0 3 chr20 62072384 62072679 -4595326 + AluSx SINE Alu 2 295 -17 180 0 0 0 chr20 62073677 62073697 -4594308 + (CA)n Simple_repeat Simple_repeat 2 21 0 324 293 130 0 chr20 62074017 62074140 -4593865 + MER113 DNA MER1_type? 264 402 -119 1346 134 48 167 chr20 62074141 62074644 -4593361 + Tigger2 DNA MER2_type 1 2718 0 278 305 133 0 chr20 62074728 62074856 -4593149 - MIR SINE MIR -70 192 48 2235 100 7 0 chr20 62075098 62075408 -4592597 + AluSp SINE Alu 1 312 -1 209 171 0 0 chr20 62076039 62076074 -4591931 + CT-rich Low_complexity Low_complexity 2 36 0 316 323 15 45 chr20 62076074 62076184 -4591821 - L2 LINE L2 -1 3312 3207 315 230 157 78 chr20 62076184 62076375 -4591630 + MIR SINE MIR 2 207 -55 391 329 175 11 chr20 62076945 62077225 -4590780 + L2 LINE L2 2988 3313 0 392 215 0 0 chr20 62079073 62079138 -4588867 + FRAM/FAM SINE Alu 1 62 -104 245 208 13 0 chr20 62079141 62079218 -4588787 + (TCCA)n Simple_repeat Simple_repeat 4 81 0 270 0 0 0 chr20 62079221 62079251 -4588754 + (TTCC)n Simple_repeat Simple_repeat 2 31 0 1062 176 0 0 chr20 62079252 62079795 -4588210 + (TCCA)n Simple_repeat Simple_repeat 1 543 0 521 202 0 0 chr20 62079800 62079899 -4588106 + FRAM SINE Alu 66 164 -12 248 321 82 23 chr20 62080118 62080347 -4587658 - L2 LINE L2 -213 3059 2799 344 290 116 49 chr20 62081795 62082140 -4585865 + L2 LINE L2 2926 3293 -20 196 254 0 55 chr20 62082498 62082553 -4585452 - L3 LINE CR1 -133 1444 1393 228 292 49 97 chr20 62082902 62083046 -4584959 - L2 LINE L2 -3 3269 3133 236 255 76 88 chr20 62084058 62084309 -4583696 + L2 LINE L2 2839 3086 -227 2092 261 142 22 chr20 62084603 62084912 -4583093 - MER69B DNA AcHobo -1447 1079 808 1868 130 10 26 chr20 62084912 62085219 -4582786 - AluSx SINE Alu -10 302 1 2092 261 142 22 chr20 62085219 62085835 -4582170 - MER69B DNA AcHobo -1718 808 43 198 0 0 0 chr20 62086349 62086371 -4581634 + (T)n Simple_repeat Simple_repeat 1 22 0 581 184 15 99 chr20 62086740 62086775 -4581230 - MER5A DNA MER1_type -9 180 144 1951 141 0 13 chr20 62086775 62087080 -4580925 + AluSq SINE Alu 1 301 -12 581 184 15 99 chr20 62087080 62087215 -4580790 - MER5A DNA MER1_type -45 144 13 224 250 0 0 chr20 62088265 62088309 -4579696 + MIR SINE MIR 48 91 -171 1428 216 18 102 chr20 62088358 62088456 -4579549 - MLT1C LTR MaLR 0 467 362 2133 94 7 3 chr20 62088456 62088754 -4579251 - AluSp SINE Alu -14 299 1 1428 216 18 102 chr20 62088754 62089108 -4578897 - MLT1C LTR MaLR -105 362 53 388 279 19 0 chr20 62089170 62089274 -4578731 - MER63A DNA MER1_type -28 182 77 640 228 71 76 chr20 62089430 62089480 -4578525 + MER58A DNA MER1_type 1 50 -2370 1950 106 3 11 chr20 62089480 62089787 -4578218 - AluSq SINE Alu 0 313 14 640 228 71 76 chr20 62089787 62089960 -4578045 + MER58A DNA MER1_type 50 223 -1 838 299 52 3 chr20 62090046 62090391 -4577614 + MER113 DNA MER1_type? 160 521 0 1983 115 7 3 chr20 62091990 62092278 -4575727 + AluSq SINE Alu 1 289 -24 1359 265 88 27 chr20 62092455 62092930 -4575075 - MLT1D LTR MaLR -1 504 1 1229 268 62 95 chr20 62093024 62093622 -4574383 - MLT1G LTR MaLR -16 574 2 719 163 84 22 chr20 62093696 62093874 -4574131 + MER53 DNA DNA 1 189 0 254 328 201 5 chr20 62094313 62094517 -4573488 - MIR SINE MIR 0 262 19 1486 212 55 64 chr20 62094650 62095102 -4572903 + MLT1C LTR MaLR 11 458 -9 262 320 48 8 chr20 62096432 62096557 -4571448 + MIR SINE MIR 63 192 -70 195 273 23 0 chr20 62096589 62096633 -4571372 - L2 LINE L2 -18 3254 3210 319 296 113 14 chr20 62096637 62096779 -4571226 - MIR SINE MIR -98 164 9 2763 163 96 155 chr20 62096838 62097793 -4570212 - MER21A LTR ERV1 -9 922 24 184 228 13 13 chr20 62097804 62097883 -4570122 + (TA)n Simple_repeat Simple_repeat 2 80 0 584 170 23 59 chr20 62097894 62098030 -4569975 - MER58A DNA MER1_type 0 147 35 1783 189 37 14 chr20 62098058 62098412 -4569593 - MLT1A1 LTR MaLR 0 365 4 516 140 149 0 chr20 62098423 62098530 -4569475 + L1MB5 LINE L1 6038 6160 -14 352 214 43 14 chr20 62098530 62098600 -4569405 - MER58A DNA MER1_type -33 74 3 483 342 32 5 chr20 62098758 62098948 -4569057 + MIR SINE MIR 38 232 -30 3449 187 49 7 chr20 62100071 62100551 -4567454 - L1MC1 LINE L1 -6 6327 5808 2282 102 0 0 chr20 62100551 62100855 -4567150 + AluSx SINE Alu 1 304 -8 3449 187 49 7 chr20 62100855 62101064 -4566941 - L1MC1 LINE L1 -525 5808 5609 280 220 0 0 chr20 62101068 62101127 -4566878 - Tigger7 DNA MER2_type -4 2487 2429 * 2978 168 37 2 chr20 62101119 62101630 -4566375 - Tigger7 DNA MER2_type -1958 529 1 988 168 9 0 chr20 62101630 62101817 -4566188 - L1MC1 LINE L1 -726 5607 5409 21 0 0 0 chr20 62102514 62102535 -4565470 + AT_rich Low_complexity Low_complexity 1 21 0 315 71 0 0 chr20 62103009 62103051 -4564954 + (TG)n Simple_repeat Simple_repeat 1 42 0 493 317 122 18 chr20 62103850 62104470 -4563535 - L2 LINE L2 -6 3307 2566 2949 167 30 2 chr20 62104470 62104968 -4563037 - MER41E LTR ERV1 0 512 1 482 219 124 7 chr20 62105097 62105234 -4562771 + MER63 DNA MER1_type 2 780 -282 1736 149 0 44 chr20 62106381 62106697 -4561308 + AluJo SINE Alu 1 302 -10 350 349 24 18 chr20 62106699 62106865 -4561140 + MIR SINE MIR 20 186 -76 1468 147 71 8 chr20 62107675 62107977 -4560028 + AluJb SINE Alu 1 319 0 393 284 153 17 chr20 62108952 62109128 -4558877 - MIR SINE MIR 0 262 63 1192 48 0 38 chr20 62109265 62109451 -4558554 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1991 136 0 13 chr20 62109472 62109782 -4558223 - AluSg SINE Alu 0 310 5 24 85 0 0 chr20 62110338 62110397 -4557608 + AT_rich Low_complexity Low_complexity 1 59 0 472 237 9 0 chr20 62110409 62110526 -4557479 - L1MA7 LINE L1 -22 6269 6161 1075 207 16 12 chr20 62110528 62110770 -4557235 - L1MA7 LINE L1 -227 6064 5822 850 187 7 7 chr20 62111462 62111617 -4556388 + FRAM SINE Alu 1 155 -21 449 200 0 0 chr20 62111620 62111695 -4556310 - MER81 DNA DNA -39 75 1 299 207 46 103 chr20 62112411 62112498 -4555507 - L2 LINE L2 -1 3312 3231 876 286 93 26 chr20 62113017 62113394 -4554611 + L2 LINE L2 2910 3311 -2 336 262 48 48 chr20 62114203 62114390 -4553615 + L2 LINE L2 3026 3212 -101 1066 188 5 0 chr20 62114623 62114858 -4553147 - AluJb SINE Alu 0 320 85 614 292 61 71 chr20 62115022 62115433 -4552572 + MLT1I LTR MaLR 1 407 -2 330 283 62 45 chr20 62116113 62116290 -4551715 + MER5A DNA MER1_type 7 186 -3 2696 13 3 3 chr20 62116476 62116789 -4551216 + AluYb8 SINE Alu 1 313 -5 892 314 147 24 chr20 62116907 62117369 -4550636 + MLT1K LTR MaLR 70 588 0 277 391 16 0 chr20 62118211 62118339 -4549666 + L2 LINE L2 3178 3307 -6 * 436 293 40 66 chr20 62118321 62118594 -4549411 + L3 LINE CR1 1162 1427 -150 442 270 39 72 chr20 62118989 62119255 -4548750 - LTR16A1 LTR ERVL -1 456 220 249 297 17 17 chr20 62119260 62119378 -4548627 + L1MC4 LINE L1 7806 7923 -119 261 136 23 159 chr20 62119543 62119631 -4548374 - L1ME4a LINE L1 -70 6051 5976 189 121 0 0 chr20 62119634 62119667 -4548338 + (TG)n Simple_repeat Simple_repeat 2 34 0 2116 154 27 3 chr20 62120280 62120650 -4547355 - L1MC2 LINE L1 -8 6336 5958 22 0 0 0 chr20 62120680 62120702 -4547303 + AT_rich Low_complexity Low_complexity 1 22 0 391 141 0 28 chr20 62120762 62120833 -4547172 - L1PA16 LINE L1 -3 6163 6095 1668 184 10 7 chr20 62120836 62121135 -4546870 + AluJo SINE Alu 1 300 -12 351 109 0 0 chr20 62121149 62121204 -4546801 - MLT2A1 LTR ERVL 0 444 390 315 214 0 29 chr20 62121209 62121279 -4546726 - L1MC4 LINE L1 -1339 6703 6636 1598 122 8 20 chr20 62121281 62121496 -4546509 - MLT2A1 LTR ERVL -40 404 191 950 51 0 0 chr20 62121496 62121614 -4546391 - L1PA5 LINE L1 0 6154 6037 582 144 0 0 chr20 62121614 62121704 -4546301 + MLT2A1 LTR ERVL 139 228 -216 1340 82 22 0 chr20 62121744 62121928 -4546077 - MLT2A1 LTR ERVL -256 188 1 338 294 18 69 chr20 62121938 62122007 -4545998 - L1ME LINE L1 -369 5752 5681 836 199 62 24 chr20 62122007 62122218 -4545787 - MER20 DNA MER1_type 0 219 1 338 294 18 69 chr20 62122218 62122366 -4545639 - L1ME LINE L1 -440 5681 5546 2555 115 0 23 chr20 62122677 62123061 -4544944 + THE1C LTR MaLR 1 375 0 2730 183 8 16 chr20 62124259 62124769 -4543236 - MER44D DNA MER2_type 0 705 200 3499 196 42 26 chr20 62124769 62125529 -4542476 + MER4E LTR ERV1 1 772 -7 1089 192 5 37 chr20 62125532 62125746 -4542259 - MER44D DNA MER2_type -498 207 1 702 207 50 6 chr20 62126583 62126762 -4541243 + MER5A DNA MER1_type 3 189 0 610 263 73 28 chr20 62126957 62127204 -4540801 + MIR SINE MIR 5 262 0 329 316 10 0 chr20 62127503 62127601 -4540404 - MER5A DNA MER1_type -90 99 1 814 242 56 5 chr20 62128212 62128428 -4539577 - MIR SINE MIR -14 248 19 223 317 24 0 chr20 62128793 62128875 -4539130 + L2 LINE L2 3230 3313 0 280 336 57 7 chr20 62129435 62129575 -4538430 - L2 LINE L2 -44 3269 3123 226 294 0 103 chr20 62130042 62130178 -4537827 + LTR67 LTR ERVL 429 550 -7 388 325 78 39 chr20 62131088 62131319 -4536686 + MIR SINE MIR 2 241 -21 233 258 34 34 chr20 62131618 62131707 -4536298 - MIR SINE MIR -108 154 66 311 314 34 25 chr20 62132239 62132357 -4535648 + L1 LINE L1 3619 3737 -2409 6903 153 64 2 chr20 62132363 62134541 -4533464 - L1PA7 LINE L1 -1 6153 3828 2131 151 103 5 chr20 62134682 62135072 -4532933 + MSTA LTR MaLR 1 428 0 1308 154 9 14 chr20 62135159 62135379 -4532626 + MER20 DNA MER1_type 1 219 0 485 216 17 9 chr20 62135489 62135605 -4532400 + L1MC5 LINE L1 7325 7441 -520 889 226 124 54 chr20 62135700 62136014 -4531991 + MER2 DNA MER2_type 2 337 -8 542 245 110 14 chr20 62136041 62136323 -4531682 + L1MC5 LINE L1 7616 7924 -37 275 352 63 31 chr20 62136441 62136600 -4531405 - MIR3 SINE MIR -42 166 3 1293 195 152 51 chr20 62137468 62137955 -4530050 + MLT1E LTR MaLR 56 591 -2 227 333 13 13 chr20 62137955 62138033 -4529972 - MIR SINE MIR -94 114 37 258 265 206 34 chr20 62138217 62138421 -4529584 - MIR SINE MIR -8 254 16 1469 245 45 47 chr20 62138587 62138859 -4529146 - MER74A LTR ERVL -29 529 257 2291 131 31 0 chr20 62138859 62139210 -4528795 + THE1B LTR MaLR 1 362 -2 1469 245 45 47 chr20 62139210 62139467 -4528538 - MER74A LTR ERVL -301 257 1 2303 106 3 0 chr20 62139570 62139872 -4528133 + AluSp SINE Alu 1 303 -10 2305 175 17 21 chr20 62140519 62140998 -4527007 + L1MA4 LINE L1 5824 6300 0 370 300 62 31 chr20 62141249 62141379 -4526626 - L2 LINE L2 0 3313 3180 324 349 84 40 chr20 62141510 62141820 -4526185 - L2 LINE L2 -449 2865 2525 462 225 300 0 chr20 62141820 62141980 -4526025 + MER63A DNA MER1_type 1 208 -2 324 349 84 40 chr20 62141980 62142147 -4525858 - L2 LINE L2 -789 2525 2367 979 191 133 102 chr20 62142432 62142725 -4525280 + AluJo SINE Alu 4 305 -7 204 200 0 22 chr20 62142727 62142772 -4525233 - L2 LINE L2 -1047 2267 2224 233 271 261 24 chr20 62142914 62143297 -4524708 - L2 LINE L2 -1230 2084 1611 1735 266 22 18 chr20 62143301 62143849 -4524156 + L1MB8 LINE L1 13 562 -5980 4524 189 4 51 chr20 62143849 62144962 -4523043 + L1MC2 LINE L1 5274 6333 -11 2182 211 46 49 chr20 62144964 62145642 -4522363 + L1MB8 LINE L1 542 1217 -5325 * 2258 202 87 87 chr20 62145639 62146714 -4521291 + L1MB8 LINE L1 2587 3658 -2986 1378 185 85 44 chr20 62146719 62147129 -4520876 + L1MA8 LINE L1 5861 6287 -4 * 6764 218 49 10 chr20 62147124 62148211 -4519794 + L1MB8 LINE L1 3669 4712 -1964 1969 142 13 0 chr20 62148211 62148528 -4519477 - L1PA14 LINE L1 -10 6151 5831 6764 218 49 10 chr20 62148528 62150325 -4517680 + L1MB8 LINE L1 4712 6670 -6 4746 238 60 11 chr20 62150330 62151137 -4516868 + L1MB7 LINE L1 3440 4206 -1940 441 0 0 0 chr20 62151137 62151186 -4516819 + (CA)n Simple_repeat Simple_repeat 2 50 0 4746 238 60 11 chr20 62151186 62151868 -4516137 + L1MB7 LINE L1 4206 5002 -1144 1150 184 18 0 chr20 62151871 62152143 -4515862 - L1 LINE L1 -3009 3137 2861 2248 133 8 8 chr20 62152149 62152527 -4515478 + L1MA5A LINE L1 5909 6292 -5 3835 183 34 24 chr20 62152582 62153043 -4514962 + L1MB7 LINE L1 5019 5474 -710 2466 90 0 0 chr20 62153043 62153355 -4514650 + AluSx SINE Alu 1 312 0 3835 183 34 24 chr20 62153355 62154034 -4513971 + L1MB7 LINE L1 5474 6168 -16 353 180 38 0 chr20 62154196 62154283 -4513722 - MER2 DNA MER2_type -150 89 1 262 315 77 63 chr20 62155023 62155166 -4512839 + L2 LINE L2 2909 3053 -260 228 182 45 30 chr20 62155258 62155324 -4512681 + CT-rich Low_complexity Low_complexity 3 69 0 940 109 5 27 chr20 62155325 62155509 -4512496 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 493 266 323 19 chr20 62155510 62155878 -4512127 - L2 LINE L2 -20 3293 2814 24 32 0 0 chr20 62156392 62156423 -4511582 + AT_rich Low_complexity Low_complexity 1 31 0 243 348 30 30 chr20 62158140 62158275 -4509730 - L2 LINE L2 0 3272 3138 370 282 18 0 chr20 62158348 62158458 -4509547 - L2 LINE L2 -4 3268 3157 507 175 31 0 chr20 62158594 62158691 -4509314 - MER5A DNA MER1_type -65 124 25 419 330 75 39 chr20 62158737 62158988 -4509017 - L2 LINE L2 -340 2974 2701 1571 217 57 39 chr20 62158988 62159482 -4508523 - MLT1D LTR MaLR 0 505 3 419 330 75 39 chr20 62159482 62159645 -4508360 - L2 LINE L2 -613 2701 2545 302 277 93 31 chr20 62160018 62160173 -4507832 + MIR SINE MIR 20 185 -63 22 0 0 0 chr20 62160400 62160422 -4507583 + AT_rich Low_complexity Low_complexity 1 22 0 1197 134 0 10 chr20 62161277 62161471 -4506534 + L1PB1 LINE L1 5957 6148 -3 320 265 33 135 chr20 62161594 62161809 -4506196 + L2 LINE L2 3121 3313 0 1295 315 102 19 chr20 62161911 62162765 -4505240 - L2 LINE L2 -1208 2106 1182 372 325 42 26 chr20 62162766 62162957 -4505048 - L2 LINE L2 -2446 868 675 541 263 32 55 chr20 62163138 62163355 -4504650 - MIR SINE MIR -32 230 19 2210 126 0 0 chr20 62163744 62164046 -4503959 - AluSx SINE Alu -10 302 1 256 212 30 15 chr20 62164126 62164192 -4503813 - L1MC4 LINE L1 -155 7887 7821 2230 236 89 25 chr20 62164237 62165054 -4502951 - L1ME2 LINE L1 -21 6143 5274 499 231 37 0 chr20 62165050 62165184 -4502821 - L1ME2 LINE L1 -1319 4827 4689 * 1469 264 77 36 chr20 62165194 62166047 -4501958 - L1ME2 LINE L1 -2663 3483 2596 338 250 196 0 chr20 62166063 62166175 -4501830 + MER119 DNA MER1_type 1 134 -449 1507 228 145 57 chr20 62166189 62166897 -4501108 - Charlie1 DNA MER1_type -665 2096 1 306 324 39 39 chr20 62167383 62167642 -4500363 + MIR SINE MIR 1 259 -3 389 300 139 9 chr20 62167660 62167883 -4500122 + MIR SINE MIR 8 259 -3 445 200 33 0 chr20 62167948 62168038 -4499967 - MER81 DNA DNA 0 114 22 2092 130 7 0 chr20 62169263 62169563 -4498442 + AluSq SINE Alu 11 312 -1 247 217 0 0 chr20 62169646 62169692 -4498313 - AluJ/monomer SINE Alu -257 46 1 856 241 122 101 chr20 62170356 62170910 -4497095 + MLT1F1 LTR MaLR 1 567 0 782 223 25 20 chr20 62171013 62171215 -4496790 - L1MD2 LINE L1 -410 5949 5747 180 0 0 0 chr20 62171256 62171276 -4496729 + (CTGTG)n Simple_repeat Simple_repeat 1 20 0 2001 109 32 18 chr20 62171484 62171767 -4496238 + AluSg1 SINE Alu 1 287 -22 237 65 0 0 chr20 62172331 62172362 -4495643 + (ATG)n Simple_repeat Simple_repeat 3 33 0 205 255 75 57 chr20 62172389 62172495 -4495510 + L2 LINE L2 3160 3267 -5 218 237 17 17 chr20 62175516 62175575 -4492430 + (TATATG)n Simple_repeat Simple_repeat 5 63 0 551 246 54 12 chr20 62175608 62175775 -4492230 - MIR SINE MIR -19 243 70 563 236 81 58 chr20 62175824 62175986 -4492019 - L1ME3A LINE L1 -15 6155 5998 1383 226 21 37 chr20 62175986 62176366 -4491639 - MLT1A2 LTR MaLR 0 374 1 563 236 81 58 chr20 62176366 62176512 -4491493 - L1ME3A LINE L1 -172 5998 5840 871 280 45 5 chr20 62176556 62176931 -4491074 - L1ME3A LINE L1 -416 5754 5365 422 321 9 9 chr20 62177014 62177229 -4490776 - L1ME3A LINE L1 -1033 5113 4899 220 215 46 0 chr20 62177393 62177458 -4490547 + L2 LINE L2 2979 3046 -226 362 284 10 0 chr20 62177780 62177882 -4490123 + (CA)n Simple_repeat Simple_repeat 2 104 0 3209 114 36 30 chr20 62178358 62178487 -4489518 - L1PB3 LINE L1 -2 6209 6082 2404 100 0 0 chr20 62178487 62178797 -4489208 - AluSg SINE Alu 0 310 1 3209 114 36 30 chr20 62178797 62179201 -4488804 - L1PB3 LINE L1 -129 6082 5673 13048 205 30 22 chr20 62179693 62181794 -4486211 - L1PB3 LINE L1 -541 5670 3588 195 42 0 0 chr20 62181794 62181818 -4486187 + (TTA)n Simple_repeat Simple_repeat 1 24 0 13048 205 30 22 chr20 62181818 62183789 -4484216 - L1PB3 LINE L1 -2623 3588 1884 2028 139 7 0 chr20 62183789 62184091 -4483914 - AluSc SINE Alu -1 308 5 13048 205 30 22 chr20 62184091 62185990 -4482015 - L1PB3 LINE L1 -4327 1884 2 47 28 0 14 chr20 62186230 62186258 -4481747 + AT_rich Low_complexity Low_complexity 1 28 -43 1950 156 0 3 chr20 62186258 62186547 -4481458 - AluSx SINE Alu -24 288 1 47 28 0 14 chr20 62186547 62186590 -4481415 + AT_rich Low_complexity Low_complexity 28 71 0 279 321 22 29 chr20 62186655 62186792 -4481213 - L2 LINE L2 -4 3309 3174 650 180 60 104 chr20 62187170 62187353 -4480652 + MER20 DNA MER1_type 23 197 -22 2127 94 52 0 chr20 62187853 62188140 -4479865 - AluSc SINE Alu -7 302 1 182 324 81 0 chr20 62188492 62188566 -4479439 - L2 LINE L2 -49 3223 3144 2142 102 0 33 chr20 62188567 62188870 -4479135 - AluSc SINE Alu -16 293 1 785 150 83 0 chr20 62188875 62188995 -4479010 - FLAM_C SINE Alu -3 130 1 23 0 0 0 chr20 62190355 62190378 -4477627 + AT_rich Low_complexity Low_complexity 1 23 0 268 189 0 0 chr20 62191656 62191709 -4476296 + L2 LINE L2 3210 3262 -10 203 178 0 22 chr20 62191887 62191932 -4476073 + G-rich Low_complexity Low_complexity 3 46 0 554 288 131 0 chr20 62191939 62192130 -4475875 + MIR SINE MIR 8 223 -39 222 300 0 0 chr20 62192870 62192920 -4475085 - L2 LINE L2 -55 3217 3168 211 349 78 6 chr20 62193020 62193186 -4474819 + MIR SINE MIR 79 256 -6 188 33 0 33 chr20 62193211 62193241 -4474764 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 1727 235 103 32 chr20 62193431 62193934 -4474071 - MLT1F1 LTR MaLR -11 556 18 833 254 19 74 chr20 62195322 62195785 -4472220 + L2 LINE L2 2644 3091 -222 196 193 0 88 chr20 62196120 62196177 -4471828 + L2 LINE L2 3262 3313 0 200 205 0 0 chr20 62196177 62196216 -4471789 + (TGAA)n Simple_repeat Simple_repeat 2 40 0 446 261 110 57 chr20 62197031 62197295 -4470710 + L1MC4a LINE L1 5614 5891 -1917 318 276 98 24 chr20 62197726 62197849 -4470156 - L2 LINE L2 -4 3268 3137 368 329 32 45 chr20 62197944 62198099 -4469906 + MER91A DNA MER1_type 3 155 -41 220 274 158 27 chr20 62198226 62198372 -4469633 - L2 LINE L2 -208 3064 2900 2472 159 44 16 chr20 62198507 62198940 -4469065 - MER65A LTR ERV1 0 445 1 1748 119 92 30 chr20 62199165 62199500 -4468505 + THE1C LTR MaLR 18 373 -2 236 313 164 22 chr20 62199876 62200010 -4467995 - MIR3 SINE MIR -41 167 15 700 217 30 18 chr20 62200037 62200203 -4467802 + MER5B DNA MER1_type 5 172 -6 310 107 0 0 chr20 62200465 62200518 -4467487 + L1ME2 LINE L1 6110 6164 -6 441 155 175 0 chr20 62201420 62201523 -4466482 - L1ME2 LINE L1 0 6164 6044 636 163 136 0 chr20 62201600 62201747 -4466258 - L1MA6 LINE L1 0 6300 6134 536 278 118 7 chr20 62201731 62202019 -4465986 - L1M4 LINE L1 -2691 3455 3136 * 1315 224 230 15 chr20 62202050 62202524 -4465481 - L1ME2 LINE L1 -158 6008 5433 668 192 44 55 chr20 62202523 62202705 -4465300 - L1ME2 LINE L1 -3213 2933 2754 * 1414 214 147 38 chr20 62202702 62203447 -4464558 - L1ME2 LINE L1 -219 5945 5121 * 4268 245 65 17 chr20 62203443 62205495 -4462510 - L1MD1 LINE L1 0 6311 4361 2341 86 7 3 chr20 62205495 62205796 -4462209 + AluSq SINE Alu 2 303 -10 4268 245 65 17 chr20 62205796 62208272 -4459733 - L1MD1 LINE L1 -1950 4361 1471 230 327 30 59 chr20 62208379 62208480 -4459525 - L2 LINE L2 -35 3278 3181 1170 101 71 84 chr20 62208753 62208991 -4459014 + THE1C LTR MaLR 1 235 -140 266 0 29 0 chr20 62208993 62209027 -4458978 + (TTTTTG)n Simple_repeat Simple_repeat 1 35 0 1665 81 0 9 chr20 62209028 62209239 -4458766 - AluY SINE Alu -102 209 1 953 159 20 0 chr20 62209239 62209390 -4458615 + THE1C LTR MaLR 222 375 0 2922 3 0 0 chr20 62210016 62210327 -4457678 + AluYa5 SINE Alu 1 311 0 256 208 167 0 chr20 62211004 62211076 -4456929 + L2 LINE L2 3195 3278 -35 266 259 72 38 chr20 62211489 62211671 -4456334 + MLT1G LTR MaLR 353 590 0 593 270 58 66 chr20 62211835 62212109 -4455896 + MLT1F1-int LTR MaLR 329 600 -771 275 257 31 149 chr20 62212766 62213089 -4454916 + MLT1F1-int LTR MaLR 1081 1365 -6 509 288 102 53 chr20 62213107 62213543 -4454462 + MLT1F1 LTR MaLR 13 519 -76 2059 110 0 27 chr20 62213543 62213835 -4454170 + AluSx SINE Alu 1 284 -28 509 288 102 53 chr20 62213835 62213896 -4454109 + MLT1F1 LTR MaLR 519 576 -19 1375 196 9 72 chr20 62214731 62215063 -4452942 + MER67D LTR ERV1 1 311 -203 566 244 72 21 chr20 62215109 62215302 -4452703 + MER67D LTR ERV1 306 508 -6 275 352 57 21 chr20 62216438 62216631 -4451374 - MIR SINE MIR -25 237 38 2417 74 0 0 chr20 62216740 62217037 -4450968 + AluY SINE Alu 1 297 -14 1745 213 33 0 chr20 62217048 62217415 -4450590 + L1MB5 LINE L1 5796 6174 0 321 252 105 42 chr20 62217715 62217858 -4450147 + MIR SINE MIR 92 243 -19 443 198 19 19 chr20 62218996 62219102 -4448903 + L1ME3A LINE L1 5999 6104 -66 243 328 0 0 chr20 62219889 62219947 -4448058 - L3b LINE CR1 -253 1330 1273 234 0 0 0 chr20 62221465 62221491 -4446514 + (T)n Simple_repeat Simple_repeat 1 26 0 1941 120 3 27 chr20 62221766 62222082 -4445923 - AluSq SINE Alu 0 309 1 207 324 153 44 chr20 62222380 62222858 -4445147 + L2 LINE L2 2432 2961 -353 * 328 361 30 6 chr20 62222844 62223010 -4444995 + L2 LINE L2 2885 3054 -218 565 244 171 16 chr20 62223081 62223274 -4444731 + MER58A DNA MER1_type 2 224 0 228 236 73 0 chr20 62223321 62223376 -4444629 + L2 LINE L2 3255 3313 0 446 333 5 5 chr20 62223525 62223711 -4444294 - MIR SINE MIR -7 255 70 180 0 0 0 chr20 62223858 62223878 -4444127 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr20 62224015 62224036 -4443969 + AT_rich Low_complexity Low_complexity 1 21 0 5538 212 55 55 chr20 62224735 62225733 -4442272 + L1MB5 LINE L1 3497 4493 -1681 2256 167 64 20 chr20 62225733 62226141 -4441864 + MSTB LTR MaLR 1 426 0 5538 212 55 55 chr20 62226141 62227773 -4440232 + L1MB5 LINE L1 4493 6120 -54 669 286 67 28 chr20 62227776 62228133 -4439872 - L1ME4a LINE L1 -3 6118 5748 225 82 61 0 chr20 62229340 62229389 -4438616 + (TA)n Simple_repeat Simple_repeat 2 53 0 2493 111 56 0 chr20 62230295 62230637 -4437368 + THE1B LTR MaLR 4 364 0 222 281 118 0 chr20 62232473 62232572 -4435433 - MIR SINE MIR -67 141 49 205 161 0 0 chr20 62233226 62233257 -4434748 + (TG)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr20 62233719 62233741 -4434264 + AT_rich Low_complexity Low_complexity 1 22 0 657 205 149 0 chr20 62234446 62234607 -4433398 - MLT1F LTR MaLR -11 531 347 329 324 34 7 chr20 62234697 62234845 -4433160 - MLT1F LTR MaLR -334 256 105 272 241 0 0 chr20 62234897 62234955 -4433050 - MLT1F LTR MaLR -535 60 3 898 255 59 38 chr20 62235203 62235608 -4432397 + MLT1G1 LTR MaLR 125 595 0 602 262 25 25 chr20 62235621 62235858 -4432147 + L1MEc LINE L1 1375 1611 -4785 22 35 0 0 chr20 62235953 62235982 -4432023 + AT_rich Low_complexity Low_complexity 1 29 0 313 309 83 48 chr20 62236196 62236426 -4431579 + MIR SINE MIR 11 248 -14 538 261 57 23 chr20 62237060 62237236 -4430769 + MIR SINE MIR 46 227 -35 278 224 0 17 chr20 62237270 62237328 -4430677 + L2 LINE L2 3186 3242 -71 26 30 0 0 chr20 62237832 62237865 -4430140 + GC_rich Low_complexity Low_complexity 1 33 0 518 220 53 0 chr20 62239344 62239476 -4428529 + MIR SINE MIR 9 147 -115 1611 172 0 27 chr20 62242073 62242369 -4425636 - AluJo SINE Alu -17 295 8 346 325 64 25 chr20 62244314 62244517 -4423488 - MIR SINE MIR -49 213 3 983 195 54 64 chr20 62244523 62244821 -4423184 - L1MA8 LINE L1 -14 6277 5983 386 259 18 27 chr20 62245940 62246052 -4421953 - LTR16C LTR ERVL -9 482 372 298 260 207 13 chr20 62246912 62247062 -4420943 + MER5A DNA MER1_type 4 182 -7 183 189 0 0 chr20 62247935 62247972 -4420033 + MIR SINE MIR 116 152 -110 234 300 45 9 chr20 62248149 62248259 -4419746 - MIR SINE MIR -77 185 72 200 35 35 0 chr20 62248800 62248829 -4419176 + (CCCCCT)n Simple_repeat Simple_repeat 3 32 0 312 300 79 82 chr20 62250195 62250612 -4417393 + L2 LINE L2 2830 3245 -68 663 144 27 0 chr20 62251004 62251115 -4416890 - L1PB1 LINE L1 -4 6147 6034 2196 156 41 33 chr20 62252532 62253074 -4414931 - MLT2A2 LTR ERVL 0 554 3 1860 156 69 37 chr20 62253303 62253845 -4414160 - MLT2A2 LTR ERVL -2 552 1 189 262 204 10 chr20 62254063 62254166 -4413839 + MIR SINE MIR 103 225 -37 215 156 44 0 chr20 62255081 62255126 -4412879 + (CATG)n Simple_repeat Simple_repeat 4 50 0 216 0 0 0 chr20 62256709 62256733 -4411272 + (T)n Simple_repeat Simple_repeat 1 24 0 510 245 109 0 chr20 62258542 62258689 -4409316 - L1ME4a LINE L1 -15 6106 5944 280 205 135 39 chr20 62258739 62258895 -4409110 - HAL1b LINE L1 0 1348 1178 2418 76 7 3 chr20 62258938 62259241 -4408764 - AluSx SINE Alu -8 304 1 416 256 51 91 chr20 62259804 62259898 -4408107 - Charlie8 DNA MER1_type -127 203 118 2039 135 0 26 chr20 62259898 62260209 -4407796 - AluSx SINE Alu -9 303 1 416 256 51 91 chr20 62260209 62260290 -4407715 - Charlie8 DNA MER1_type -212 118 35 631 211 40 0 chr20 62260333 62260485 -4407520 - MER53 DNA DNA -10 179 22 308 269 17 0 chr20 62262111 62262230 -4405775 + GA-rich Low_complexity Low_complexity 4 124 0 29 60 0 0 chr20 62263062 62263112 -4404893 + AT_rich Low_complexity Low_complexity 1 50 0 297 114 0 0 chr20 62264312 62264356 -4403649 - L2 LINE L2 0 3272 3229 1044 223 24 8 chr20 62264455 62264702 -4403303 + MER58 DNA MER1_type 34 284 -57 349 148 39 71 chr20 62265032 62265214 -4402791 + (ATGGTG)n Simple_repeat Simple_repeat 3 178 0 298 191 27 66 chr20 62265506 62265689 -4402316 + (ATGGTG)n Simple_repeat Simple_repeat 3 178 0 228 188 38 75 chr20 62265967 62266153 -4401852 + (ATGGTG)n Simple_repeat Simple_repeat 2 180 0 265 257 27 86 chr20 62266243 62266430 -4401575 + G-rich Low_complexity Low_complexity 1 176 0 304 289 21 19 chr20 62267407 62267544 -4400461 + MIR SINE MIR 33 140 -68 1001 277 89 69 chr20 62268134 62268450 -4399555 - L1MEd LINE L1 -4976 1143 835 2414 72 0 20 chr20 62268450 62268756 -4399249 - AluY SINE Alu -11 300 1 1001 277 89 69 chr20 62268756 62269269 -4398736 - L1MEd LINE L1 -5284 835 297 429 244 23 68 chr20 62269300 62269476 -4398529 + MER5A DNA MER1_type 1 168 -21 307 299 8 16 chr20 62269540 62269667 -4398338 - L1MEd LINE L1 -5917 202 77 255 330 17 17 chr20 62269831 62269946 -4398059 + L2 LINE L2 3146 3260 -12 381 305 133 5 chr20 62270243 62270453 -4397552 + MIR SINE MIR 5 241 -21 236 283 71 49 chr20 62271026 62271210 -4396795 - L1MC/D LINE L1 -1932 5876 5689 185 203 49 8 chr20 62271239 62271362 -4396643 + (TA)n Simple_repeat Simple_repeat 1 128 0 906 92 0 0 chr20 62272009 62272139 -4395866 + (CA)n Simple_repeat Simple_repeat 2 131 0 1489 284 100 13 chr20 62273325 62273944 -4394061 - L1ME3 LINE L1 -185 5977 5413 239 0 0 31 chr20 62273944 62273976 -4394029 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1489 284 100 13 chr20 62273976 62274416 -4393589 - L1ME3 LINE L1 -749 5413 4823 22 0 0 0 chr20 62276230 62276252 -4391753 + AT_rich Low_complexity Low_complexity 1 22 0 272 266 28 83 chr20 62277033 62277142 -4390863 - MER5B DNA MER1_type -73 105 3 311 384 81 5 chr20 62277158 62277356 -4390649 + L2 LINE L2 2836 3048 -224 2175 234 78 77 chr20 62277857 62278882 -4389123 - L1ME1 LINE L1 -5 6230 5200 7868 20 1 0 chr20 62278882 62280465 -4387540 + L1PA2 LINE L1 4568 6152 -3 2175 234 78 77 chr20 62280465 62280701 -4387304 - L1ME1 LINE L1 -1035 5200 4966 354 247 123 14 chr20 62280702 62280848 -4387157 - L1ME1 LINE L1 -4203 2193 2032 188 200 50 0 chr20 62280944 62281024 -4386981 + (TA)n Simple_repeat Simple_repeat 2 85 0 302 189 49 8 chr20 62281078 62281200 -4386805 + (TA)n Simple_repeat Simple_repeat 2 128 0 514 243 85 0 chr20 62281221 62281398 -4386607 - L1ME1 LINE L1 -4359 2037 1846 246 229 76 29 chr20 62281487 62281592 -4386413 - L1MC4 LINE L1 -1321 6721 6612 27 0 0 0 chr20 62281690 62281717 -4386288 + AT_rich Low_complexity Low_complexity 1 27 0 242 163 41 0 chr20 62283939 62283988 -4384017 + MER33 DNA MER1_type 234 284 -79 690 218 37 60 chr20 62284164 62284380 -4383625 + MER20B DNA MER1_type 9 219 0 630 331 60 6 chr20 62284380 62284697 -4383308 + L2 LINE L2 2110 2443 -871 989 198 14 40 chr20 62284697 62284919 -4383086 + MER33 DNA MER1_type 1 216 -108 1223 185 8 25 chr20 62284928 62285166 -4382839 + L1MB3 LINE L1 22 255 -6129 7492 194 34 113 chr20 62285171 62286129 -4381876 + L1MB3 LINE L1 3013 4045 -2337 1893 195 42 0 chr20 62286129 62286463 -4381542 - MER7A DNA MER2_type 0 346 1 7492 194 34 113 chr20 62286463 62288092 -4379913 + L1MB3 LINE L1 4045 5396 -986 910 214 59 5 chr20 62288073 62288293 -4379712 + L1MB3 LINE L1 6184 6415 -4 * 345 170 150 10 chr20 62288328 62288428 -4379577 + MER33 DNA MER1_type 249 362 -1 591 326 125 37 chr20 62288441 62289186 -4378819 + L2 LINE L2 2481 3298 -15 515 59 29 0 chr20 62289188 62289256 -4378749 - L1PA7 LINE L1 -2 6152 6083 6813 40 12 8 chr20 62289258 62290057 -4377948 + L1PA7 LINE L1 5352 6154 0 693 287 68 35 chr20 62290454 62290851 -4377154 + LTR33 LTR ERVL 1 410 -111 198 319 74 51 chr20 62290911 62291127 -4376878 + L2 LINE L2 2075 2295 -1019 1757 158 67 33 chr20 62291195 62291555 -4376450 - THE1C LTR MaLR 0 375 4 23 33 0 0 chr20 62291836 62291866 -4376139 + AT_rich Low_complexity Low_complexity 1 30 0 230 173 96 0 chr20 62292116 62292168 -4375837 + L1MC4a LINE L1 6662 6718 -1090 184 246 204 28 chr20 62293127 62293269 -4374736 - L2 LINE L2 -1 3271 3105 257 280 79 105 chr20 62293376 62293719 -4374286 + L2 LINE L2 2921 3254 -18 714 260 30 34 chr20 62294179 62294414 -4373591 + MLT1E2 LTR MaLR 387 620 -6 182 278 28 14 chr20 62295145 62295217 -4372788 - MIR SINE MIR -17 245 173 339 89 0 0 chr20 62295224 62295269 -4372736 - AluJb SINE Alu -174 128 84 1999 52 0 34 chr20 62296221 62296490 -4371515 - L1P LINE L1 -1302 4844 4585 3802 62 15 0 chr20 62296490 62296939 -4371066 + L1PA6 LINE L1 5693 6153 -1 695 320 30 9 chr20 62296951 62297182 -4370823 + MIR SINE MIR 23 258 -4 207 0 0 0 chr20 62298127 62298150 -4369855 + (A)n Simple_repeat Simple_repeat 1 23 0 354 23 0 0 chr20 62298621 62298664 -4369341 + (TG)n Simple_repeat Simple_repeat 2 44 0 1248 242 151 34 chr20 62299145 62299563 -4368442 + MLT1D LTR MaLR 22 488 -17 696 263 145 34 chr20 62299837 62300285 -4367720 - LTR33A LTR ERVL -19 504 7 1554 268 8 4 chr20 62300302 62300798 -4367207 + L1M4 LINE L1 2724 3221 -2925 1739 154 98 0 chr20 62300798 62301116 -4366889 + MLT1A1 LTR MaLR 1 349 -16 1538 152 0 76 chr20 62301119 62301334 -4366671 - MER50 LTR ERV1 -23 711 524 2279 113 0 0 chr20 62301334 62301645 -4366360 + AluSq SINE Alu 1 311 -2 1538 152 0 76 chr20 62301645 62301731 -4366274 - MER50 LTR ERV1 -210 524 433 1402 98 21 47 chr20 62301725 62301801 -4366204 - MER50 LTR ERV1 -505 229 153 * 2095 125 3 0 chr20 62301801 62302096 -4365909 + AluSx SINE Alu 1 296 -16 1402 98 21 47 chr20 62302096 62302254 -4365751 - MER50 LTR ERV1 -581 153 1 4388 268 42 22 chr20 62302293 62302337 -4365668 + L1M4 LINE L1 3259 3301 -2845 2188 118 20 0 chr20 62302337 62302643 -4365362 + AluSx SINE Alu 1 312 0 4388 268 42 22 chr20 62302643 62304069 -4363936 + L1M4 LINE L1 3301 4759 -1387 273 29 0 0 chr20 62305765 62305799 -4362206 + (TG)n Simple_repeat Simple_repeat 1 34 0 422 320 19 0 chr20 62306174 62306330 -4361675 + Charlie8 DNA MER1_type 107 265 -2152 318 50 0 0 chr20 62306621 62306661 -4361344 + (TG)n Simple_repeat Simple_repeat 2 41 0 403 231 131 0 chr20 62306691 62306821 -4361184 - L1ME4a LINE L1 -11 6110 5964 259 279 90 9 chr20 62307141 62307252 -4360753 + MIR SINE MIR 129 248 -14 292 324 76 55 chr20 62307271 62307546 -4360459 - L1ME4a LINE L1 -491 5630 5350 24 91 0 0 chr20 62307680 62307746 -4360259 + AT_rich Low_complexity Low_complexity 1 66 0 23026 151 27 12 chr20 62308390 62308670 -4359335 - L1MA3 LINE L1 0 7724 7450 217 0 0 57 chr20 62308670 62308705 -4359300 + (CACCC)n Simple_repeat Simple_repeat 3 35 0 23026 151 27 12 chr20 62308705 62310588 -4357417 - L1MA3 LINE L1 -274 7450 5597 2311 86 0 3 chr20 62310588 62310878 -4357127 + AluY SINE Alu 1 289 -22 23026 151 27 12 chr20 62310878 62316307 -4351698 - L1MA3 LINE L1 -2127 5597 10 328 306 112 33 chr20 62316307 62316637 -4351368 - L1ME4a LINE L1 -1721 4425 4070 322 328 44 6 chr20 62316719 62316899 -4351106 + L1ME4a LINE L1 5670 5856 -265 295 308 121 30 chr20 62316941 62317139 -4350866 + MIR SINE MIR 41 256 -6 24 53 0 0 chr20 62317292 62317330 -4350675 + AT_rich Low_complexity Low_complexity 1 38 0 238 254 118 0 chr20 62318255 62318365 -4349640 - L1ME4a LINE L1 -21 6100 5978 232 206 16 16 chr20 62318554 62318617 -4349388 + L2 LINE L2 3210 3272 0 197 376 148 0 chr20 62319201 62319302 -4348703 + MIR SINE MIR 29 144 -118 699 240 11 27 chr20 62320270 62320453 -4347552 + MIR SINE MIR 12 191 -71 188 318 11 23 chr20 62320480 62320568 -4347437 - MIR SINE MIR -38 224 138 261 320 22 67 chr20 62320574 62320752 -4347253 - L2 LINE L2 -36 3277 3108 186 254 146 54 chr20 62320894 62321099 -4346906 - L2 LINE L2 -424 2890 2667 629 164 123 23 chr20 62321360 62321531 -4346474 - MER20B DNA MER1_type -38 745 558 219 69 0 0 chr20 62322550 62322579 -4345426 + (TA)n Simple_repeat Simple_repeat 2 30 0 2361 43 0 4 chr20 62322579 62322855 -4345150 - L1PA5 LINE L1 -1 6153 5879 241 176 44 0 chr20 62322889 62322957 -4345048 + CT-rich Low_complexity Low_complexity 3 73 0 2135 104 42 0 chr20 62324864 62325153 -4342852 + AluSq SINE Alu 1 301 -12 689 293 83 34 chr20 62325896 62326305 -4341700 + LTR16A LTR ERVL 16 444 -6 216 308 13 13 chr20 62327471 62327549 -4340456 - MER5B DNA MER1_type -99 79 2 336 229 9 0 chr20 62328323 62328399 -4339606 - MER58 DNA MER1_type -100 241 161 557 138 0 0 chr20 62329358 62329438 -4338567 - MADE1 DNA Mariner 0 80 1 1462 219 30 22 chr20 62332925 62333286 -4334719 + MLT2D LTR ERVL 1 364 -50 189 250 21 0 chr20 62333725 62333773 -4334232 - L2 LINE L2 -4 3309 3261 273 277 153 15 chr20 62333870 62334007 -4333998 - L2 LINE L2 -452 2862 2707 201 270 160 20 chr20 62334277 62334377 -4333628 + MIR SINE MIR 18 131 -77 888 238 26 3 chr20 62335061 62335551 -4332454 + L1MB1 LINE L1 5656 6168 0 21 0 0 0 chr20 62335633 62335654 -4332351 + AT_rich Low_complexity Low_complexity 1 21 0 205 299 103 21 chr20 62336863 62336960 -4331045 + L2 LINE L2 3209 3313 0 736 314 61 20 chr20 62337129 62337619 -4330386 + L1MC4a LINE L1 5373 5882 -1926 2257 175 10 3 chr20 62339425 62339808 -4328197 + MLT1B LTR MaLR 4 389 -1 2172 130 148 13 chr20 62340035 62340412 -4327593 + MSTA LTR MaLR 1 428 0 4071 125 18 59 chr20 62342441 62343103 -4324902 - MER41B LTR ERV1 0 635 1 1492 118 19 74 chr20 62343216 62343487 -4324518 - MER4D LTR ERV1 0 903 648 1973 178 85 33 chr20 62343488 62343948 -4324057 + LTR2B LTR ERV1 7 490 0 4410 120 9 8 chr20 62343948 62344598 -4323407 - MER4D LTR ERV1 -252 651 1 345 319 35 60 chr20 62345596 62345828 -4322177 + MIR SINE MIR 2 227 -35 239 282 14 0 chr20 62346139 62346210 -4321795 + (TA)n Simple_repeat Simple_repeat 2 73 0 1507 225 109 64 chr20 62346310 62346843 -4321162 - MLT1F1 LTR MaLR 0 567 11 444 309 69 45 chr20 62347270 62347561 -4320444 + L2 LINE L2 2928 3225 -88 615 278 34 94 chr20 62349933 62350285 -4317720 + L2 LINE L2 2940 3270 -43 420 299 43 16 chr20 62351468 62351655 -4316350 - MIR SINE MIR -22 240 49 643 233 63 16 chr20 62352091 62352280 -4315725 - MER20 DNA MER1_type 0 219 22 30 0 0 0 chr20 62352618 62352648 -4315357 + AT_rich Low_complexity Low_complexity 1 30 0 461 179 0 0 chr20 62352648 62352732 -4315273 - L1MA5 LINE L1 0 6300 6217 303 284 11 0 chr20 62355112 62355200 -4312805 + MER103 DNA DNA 69 157 -9 578 226 21 54 chr20 62355734 62355920 -4312085 + MIR SINE MIR 53 232 -30 10984 163 21 40 chr20 62357244 62358403 -4309602 + Ricksha_c DNA DNA 9 1115 -2139 2197 126 0 3 chr20 62358403 62358705 -4309300 + AluSq SINE Alu 1 301 -12 10984 163 21 40 chr20 62358705 62359608 -4308397 + Ricksha_c DNA DNA 1115 2033 -13 701 225 59 6 chr20 62359496 62359665 -4308340 - Ricksha DNA DNA -1867 179 2 * 615 131 23 39 chr20 62359917 62360047 -4307958 - Ricksha DNA DNA -95 3159 3032 253 135 0 0 chr20 62360424 62360461 -4307544 - MER5B DNA MER1_type -7 171 135 647 185 67 7 chr20 62360461 62360596 -4307409 + L1MB8 LINE L1 6034 6176 -2 373 232 141 0 chr20 62360601 62360700 -4307305 - MER5B DNA MER1_type -64 114 2 217 306 174 25 chr20 62361809 62362084 -4305921 + L2 LINE L2 2175 2490 -824 323 291 39 31 chr20 62362361 62362488 -4305517 + L2 LINE L2 3145 3272 0 234 324 35 42 chr20 62362474 62362616 -4305389 + MIR SINE MIR 91 231 -31 * 738 150 108 0 chr20 62362662 62362782 -4305223 + FRAM SINE Alu 21 153 -23 252 336 9 17 chr20 62362993 62363109 -4304896 + MIR3 SINE MIR 61 175 -33 191 291 18 0 chr20 62364216 62364271 -4303734 - L3 LINE CR1 -1117 460 405 2042 163 50 12 chr20 62364630 62365032 -4302973 - MSTB LTR MaLR -2 410 8 643 115 0 0 chr20 62365019 62365115 -4302890 - MSTB LTR MaLR -330 96 1 * 336 283 22 103 chr20 62365119 62365303 -4302702 + MIR SINE MIR 85 253 -9 2516 70 0 3 chr20 62365666 62365978 -4302027 - AluY SINE Alu 0 311 1 250 187 40 0 chr20 62367915 62367972 -4300033 - MIR SINE MIR -62 146 95 192 317 48 67 chr20 62368095 62368199 -4299806 + MIR SINE MIR 71 172 -90 180 393 22 0 chr20 62368698 62368787 -4299218 - MIR SINE MIR -171 91 1 180 111 0 0 chr20 62369612 62369639 -4298366 + (A)n Simple_repeat Simple_repeat 1 27 0 669 268 42 0 chr20 62370184 62370374 -4297631 - MER20 DNA MER1_type -4 215 18 235 241 51 25 chr20 62370717 62370796 -4297209 + L2 LINE L2 3189 3269 -3 983 180 67 48 chr20 62370939 62371255 -4296750 - MER5C DNA MER1_type -2 322 1 312 211 0 0 chr20 62371527 62371579 -4296426 - MER81 DNA DNA -58 56 5 1845 301 87 30 chr20 62371639 62372803 -4295202 - L1MC4a LINE L1 -360 7448 6219 265 212 51 15 chr20 62372806 62372943 -4295062 + (TA)n Simple_repeat Simple_repeat 2 143 0 410 269 119 0 chr20 62373155 62373289 -4294716 - L1MC4a LINE L1 -1836 5972 5823 26 64 0 0 chr20 62373290 62373337 -4294668 + AT_rich Low_complexity Low_complexity 1 47 0 5157 140 41 27 chr20 62373342 62374742 -4293263 + L1PA15 LINE L1 4706 6125 -40 740 260 57 37 chr20 62374832 62375078 -4292927 - L1MC4a LINE L1 -2002 5806 5556 2195 102 13 16 chr20 62375257 62375570 -4292435 - AluSx SINE Alu 0 312 1 433 277 40 34 chr20 62375705 62375882 -4292123 - MER5B DNA MER1_type 0 178 1 40 73 0 0 chr20 62376348 62376430 -4291575 + AT_rich Low_complexity Low_complexity 1 82 0 25 31 0 0 chr20 62376486 62376518 -4291487 + AT_rich Low_complexity Low_complexity 1 32 0 193 117 52 26 chr20 62376527 62376558 -4291447 + (TATAA)n Simple_repeat Simple_repeat 2 31 -49 1866 92 59 15 chr20 62376558 62376831 -4291174 + AluSg SINE Alu 1 285 -25 193 117 52 26 chr20 62376831 62376876 -4291129 + (TATAA)n Simple_repeat Simple_repeat 31 80 0 22 0 0 0 chr20 62377466 62377488 -4290517 + AT_rich Low_complexity Low_complexity 1 22 0 205 214 18 0 chr20 62377622 62377678 -4290327 + (TA)n Simple_repeat Simple_repeat 1 57 0 567 285 47 45 chr20 62377692 62378053 -4289952 + L1ME4a LINE L1 5501 5858 -263 484 271 193 0 chr20 62379462 62379628 -4288377 - MIR SINE MIR -29 233 36 183 80 0 0 chr20 62380217 62380242 -4287763 + (T)n Simple_repeat Simple_repeat 1 25 0 306 0 0 0 chr20 62380510 62380544 -4287461 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 21630 27 0 0 chr20 62380544 62383725 -4284280 - L1PA2 LINE L1 -16 6139 2959 1746 235 81 144 chr20 62384280 62385879 -4282126 - L2 LINE L2 -533 2781 1283 501 242 0 0 chr20 62385881 62385980 -4282025 - MER5A DNA MER1_type 0 189 91 312 324 84 0 chr20 62386057 62386199 -4281806 - L2 LINE L2 -2063 1251 1098 194 323 75 0 chr20 62386565 62386658 -4281347 + MIR SINE MIR 104 203 -59 219 69 0 0 chr20 62386894 62386923 -4281082 + (TG)n Simple_repeat Simple_repeat 2 30 0 318 222 0 111 chr20 62386923 62387022 -4280983 - L1MC4 LINE L1 -1339 6703 6616 2185 97 7 0 chr20 62387976 62388276 -4279729 - AluSx SINE Alu -10 302 1 311 272 123 53 chr20 62388923 62389037 -4278968 - MIR SINE MIR -32 230 109 923 262 59 0 chr20 62389515 62389786 -4278219 - L1MD3 LINE L1 0 7995 7709 2208 110 3 0 chr20 62389842 62390151 -4277854 + AluSx SINE Alu 1 310 -2 377 238 121 58 chr20 62390172 62390280 -4277725 - L1MCb LINE L1 -5827 595 495 2101 95 3 0 chr20 62390280 62390595 -4277410 - AluSx SINE Alu 0 316 1 377 238 121 58 chr20 62390595 62390708 -4277297 - L1MCb LINE L1 -5927 495 37 339 318 40 20 chr20 62390808 62391009 -4276996 + L1ME4a LINE L1 5678 5882 -239 257 333 11 11 chr20 62391476 62391563 -4276442 + MIR SINE MIR 14 100 -162 3479 181 65 26 chr20 62391566 62392268 -4275737 - MER21B LTR ERV1 0 863 134 305 193 34 25 chr20 62392301 62392420 -4275585 + (TA)n Simple_repeat Simple_repeat 1 120 0 256 18 55 36 chr20 62392441 62392496 -4275509 + (TA)n Simple_repeat Simple_repeat 1 56 0 372 270 50 0 chr20 62392625 62392725 -4275280 - MER21B LTR ERV1 -758 105 1 571 268 39 13 chr20 62392725 62392878 -4275127 + MIR SINE MIR 95 251 -11 313 316 115 17 chr20 62393832 62394066 -4273939 + MIR SINE MIR 6 262 0 1146 209 51 18 chr20 62394343 62394616 -4273389 + AluJb SINE Alu 1 282 -30 227 143 0 0 chr20 62394665 62394700 -4273305 - L2 LINE L2 -672 2642 2608 22 0 0 0 chr20 62396374 62396396 -4271609 + AT_rich Low_complexity Low_complexity 1 22 0 1482 167 65 142 chr20 62397028 62397584 -4270421 + MER67D LTR ERV1 1 513 -1 389 254 55 9 chr20 62398089 62398199 -4269806 - MIR SINE MIR -108 154 40 1628 187 68 6 chr20 62400651 62401066 -4266939 - MLT1D LTR MaLR -6 499 9 410 255 190 11 chr20 62401679 62401863 -4266142 + L2 LINE L2 3097 3313 0 398 323 48 98 chr20 62402101 62402602 -4265403 + HAL1b LINE L1 27 502 -846 1309 102 15 19 chr20 62402728 62402934 -4265071 + AluSx SINE Alu 1 205 -107 332 320 31 62 chr20 62403616 62403720 -4264285 + MIR SINE MIR 45 146 -62 1472 220 7 20 chr20 62403720 62404024 -4263981 + AluJo SINE Alu 1 300 -2 332 320 31 62 chr20 62404024 62404047 -4263958 + MIR SINE MIR 146 168 -40 1076 278 36 7 chr20 62404295 62404604 -4263401 - MER77 LTR ERV1 -6 599 282 377 299 0 9 chr20 62404649 62404756 -4263249 - MER77 LTR ERV1 -446 159 54 1033 212 30 4 chr20 62405017 62405248 -4262757 - MER58B DNA MER1_type -1 340 104 1210 209 28 52 chr20 62405250 62405576 -4262429 + L1MC2 LINE L1 6010 6327 -17 318 247 0 26 chr20 62405576 62405653 -4262352 - MER58B DNA MER1_type -247 94 20 292 309 80 57 chr20 62406873 62407048 -4260957 + MIR SINE MIR 7 185 -77 393 279 162 7 chr20 62409295 62409449 -4258556 + MER5A DNA MER1_type 12 189 0 423 0 0 0 chr20 62412464 62412511 -4255494 + (TG)n Simple_repeat Simple_repeat 2 48 0 673 205 38 54 chr20 62413374 62413559 -4254446 - MER20 DNA MER1_type -4 215 34 1048 227 22 0 chr20 62413771 62413996 -4254009 - MLT1D LTR MaLR -21 484 255 357 218 62 148 chr20 62414189 62414432 -4253573 - MLT1E2 LTR MaLR -263 242 18 584 226 0 6 chr20 62414781 62414958 -4253047 + (TG)n Simple_repeat Simple_repeat 1 176 0 588 213 3 13 chr20 62414990 62415299 -4252706 + (TG)n Simple_repeat Simple_repeat 1 305 0 703 258 5 27 chr20 62416718 62416904 -4251101 - MIR SINE MIR -36 226 45 473 167 0 69 chr20 62416919 62417021 -4250984 + MER63 DNA MER1_type 32 752 -84 258 300 0 0 chr20 62417022 62417092 -4250913 + MER63 DNA MER1_type 980 1049 -13 453 214 26 0 chr20 62418484 62418601 -4249404 + L1MB7 LINE L1 6065 6184 0 1366 185 23 55 chr20 62418612 62418920 -4249085 + AluJo SINE Alu 1 298 -14 221 56 0 28 chr20 62419500 62419536 -4248469 + (CAA)n Simple_repeat Simple_repeat 2 36 0 268 170 22 185 chr20 62419705 62419840 -4248165 + MLT1H LTR MaLR 434 546 -3 2258 222 58 22 chr20 62420530 62421156 -4246849 - L1MC4a LINE L1 -1 7807 7160 258 339 100 8 chr20 62423237 62423367 -4244638 + MIR SINE MIR 92 233 -29 285 226 38 0 chr20 62423660 62423713 -4244292 - MER115 DNA AcHobo -636 57 3 1711 170 7 0 chr20 62424888 62425192 -4242813 + AluJb SINE Alu 4 309 0 730 263 80 47 chr20 62425211 62425521 -4242484 + MLT2C1 LTR ERVL 20 345 -52 622 85 28 0 chr20 62425521 62425627 -4242378 + (TAGA)n Simple_repeat Simple_repeat 2 110 0 730 263 80 47 chr20 62425627 62425681 -4242324 + MLT2C1 LTR ERVL 345 396 -1 207 186 0 0 chr20 62425884 62425927 -4242078 + (TA)n Simple_repeat Simple_repeat 2 44 0 263 312 110 0 chr20 62426744 62426853 -4241152 - MER103 DNA DNA -44 122 2 211 338 113 33 chr20 62428166 62428317 -4239688 - L2 LINE L2 -14 3299 3137 550 209 63 73 chr20 62428441 62428632 -4239373 + MLT1K LTR MaLR 128 316 -272 399 182 26 0 chr20 62428715 62428792 -4239213 + MER96 DNA MER1_type? 97 175 0 333 272 0 95 chr20 62428807 62428954 -4239051 + MLT1K LTR MaLR 345 477 -111 290 248 15 102 chr20 62429366 62429503 -4238502 + MLT1K LTR MaLR 455 579 -9 204 289 121 0 chr20 62429544 62429627 -4238378 + L2 LINE L2 3150 3242 -30 239 128 0 0 chr20 62429929 62429968 -4238037 - MSTA LTR MaLR 0 428 390 726 195 312 0 chr20 62429969 62430174 -4237831 - L1 LINE L1 -1095 5051 4783 1265 108 12 3 chr20 62430188 62430390 -4237615 + L1PA8A LINE L1 5617 5817 -314 314 275 0 44 chr20 62430433 62430524 -4237481 - L1MC4 LINE L1 -1342 6700 6614 2685 90 3 0 chr20 62430532 62430900 -4237105 + L1PB1 LINE L1 5783 6151 0 1997 148 0 0 chr20 62430920 62431230 -4236775 + AluSx SINE Alu 1 310 -2 306 0 0 0 chr20 62431230 62431264 -4236741 + (GGAAA)n Simple_repeat Simple_repeat 2 35 0 1103 88 6 16 chr20 62431267 62431449 -4236556 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2011 152 73 5 chr20 62431450 62431818 -4236187 - MSTA LTR MaLR -35 393 1 666 239 72 58 chr20 62431912 62432359 -4235646 + MLT1E1 LTR MaLR 136 647 -7 207 0 0 0 chr20 62433234 62433257 -4234748 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1015 243 31 8 chr20 62433634 62433889 -4234116 + MIR SINE MIR 2 262 0 413 205 71 9 chr20 62435137 62435249 -4232756 + MER20 DNA MER1_type 100 218 -1 1690 150 19 0 chr20 62435300 62435567 -4232438 - AluSx SINE Alu -38 274 3 318 276 49 86 chr20 62436379 62436542 -4231463 - MIR SINE MIR -77 185 29 411 251 141 42 chr20 62436562 62436753 -4231252 + MIR SINE MIR 31 240 -22 851 137 9 23 chr20 62437695 62437994 -4230011 - MER4B LTR ERV1 0 610 261 566 125 31 10 chr20 62437994 62438090 -4229915 - MER4A LTR ERV1 -566 98 1 361 344 32 0 chr20 62439243 62439368 -4228637 + MIR SINE MIR 69 197 -65 229 330 170 0 chr20 62440172 62440284 -4227721 - MIR SINE MIR -58 150 20 1031 223 18 40 chr20 62440428 62440652 -4227353 - MER20 DNA MER1_type 0 219 1 262 211 35 0 chr20 62442147 62442204 -4225801 + MIR SINE MIR 66 124 -138 465 315 49 7 chr20 62442442 62442750 -4225255 - L1M4 LINE L1 -3615 2531 2211 23 0 0 0 chr20 62443034 62443057 -4224948 + AT_rich Low_complexity Low_complexity 1 23 0 350 289 94 37 chr20 62443200 62443681 -4224324 + HAL1 LINE L1 1161 1668 -839 346 272 54 0 chr20 62444102 62444194 -4223811 + MER58B DNA MER1_type 245 341 0 931 88 0 0 chr20 62444544 62444657 -4223348 + AluSp SINE Alu 1 113 -200 2643 61 0 0 chr20 62444657 62444968 -4223037 - L1PA8 LINE L1 -14 6158 5848 204 373 34 17 chr20 62445146 62445264 -4222741 + L2 LINE L2 3150 3269 -3 3565 189 53 4 chr20 62446242 62446926 -4221079 - L1MD1 LINE L1 -1 6241 5525 194 216 78 39 chr20 62448286 62448337 -4219668 + MIR SINE MIR 43 95 -167 2246 129 3 0 chr20 62448350 62448660 -4219345 - AluSq SINE Alu -2 311 1 262 304 132 43 chr20 62448921 62449201 -4218804 - L2 LINE L2 -1 3312 3008 21 0 0 0 chr20 62450418 62450439 -4217566 + AT_rich Low_complexity Low_complexity 1 21 0 208 281 78 0 chr20 62450740 62450804 -4217201 + MIR SINE MIR 160 228 -34 1920 98 0 4 chr20 62451840 62452095 -4215910 + AluSq SINE Alu 1 254 -59 236 195 0 0 chr20 62453137 62453178 -4214827 + CT-rich Low_complexity Low_complexity 1 41 0 421 269 116 68 chr20 62453668 62454081 -4213924 - L1MC/D LINE L1 -2050 5758 5326 329 300 67 77 chr20 62454669 62454982 -4213023 - L1MC/D LINE L1 -2128 4018 3709 517 175 0 39 chr20 62455035 62455138 -4212867 - FLAM_C SINE Alu 0 143 45 2052 126 0 7 chr20 62455224 62455565 -4212440 + AluSq SINE Alu 1 339 0 431 262 49 8 chr20 62456610 62456732 -4211273 + MLT1C LTR MaLR 28 154 -351 2215 95 16 9 chr20 62456736 62457135 -4210870 - LTR7 LTR ERV1 -2 448 1 1397 210 48 93 chr20 62457168 62457751 -4210254 - LTR24B LTR ERV1 -7 569 1 731 255 68 13 chr20 62457788 62458023 -4209982 + MLT1C LTR MaLR 220 467 0 182 239 65 0 chr20 62459108 62459154 -4208851 - L2 LINE L2 0 3313 3265 254 348 51 0 chr20 62459177 62459295 -4208710 - MIR SINE MIR -23 239 116 782 215 38 21 chr20 62459856 62460042 -4207963 + MER5A DNA MER1_type 1 189 0 339 268 127 75 chr20 62460049 62460310 -4207695 + LTR16A1 LTR ERVL 7 300 -157 4306 146 29 35 chr20 62460310 62461042 -4206963 - LTR8A LTR ERV1 0 727 1 339 268 127 75 chr20 62461042 62461205 -4206800 + LTR16A1 LTR ERVL 300 453 -4 2871 132 29 20 chr20 62461377 62461960 -4206045 - MER4B LTR ERV1 0 779 1 2244 118 0 0 chr20 62462920 62463217 -4204788 - AluSx SINE Alu -15 297 1 1772 189 154 48 chr20 62463950 62464411 -4203594 - MER67D LTR ERV1 -4 510 1 270 184 53 105 chr20 62466560 62466626 -4201379 - L1MC3 LINE L1 0 7785 7726 2510 144 38 24 chr20 62466626 62467048 -4200957 + MSTA LTR MaLR 1 428 0 270 184 53 105 chr20 62467048 62467095 -4200910 - L1MC3 LINE L1 -59 7726 7678 * 3930 264 113 16 chr20 62467093 62467778 -4200227 - L1MB8 LINE L1 -2 6176 5559 792 66 8 16 chr20 62467778 62467900 -4200105 + (TTTC)n Simple_repeat Simple_repeat 2 122 0 2125 98 0 14 chr20 62467900 62468187 -4199818 - AluY SINE Alu -28 283 1 3930 264 113 16 chr20 62468187 62469021 -4198984 - L1MB8 LINE L1 -619 5559 4807 1740 179 26 35 chr20 62469021 62469368 -4198637 + MER2 DNA MER2_type 1 344 0 3930 264 113 16 chr20 62469368 62469950 -4198055 - L1MB8 LINE L1 -1371 4807 3857 806 174 15 0 chr20 62469951 62470083 -4197922 - FRAM SINE Alu -17 159 26 3779 224 42 23 chr20 62470083 62471048 -4196957 - L1MC3 LINE L1 -816 6969 5987 796 284 23 4 chr20 62471057 62471314 -4196691 - L1M4 LINE L1 -1432 5509 5248 * 2058 239 51 17 chr20 62471285 62471992 -4196013 - L1MCc LINE L1 -2958 3983 3253 14789 122 49 25 chr20 62471998 62472054 -4195951 + Tigger1 DNA MER2_type 1 54 -2364 2321 89 0 0 chr20 62472054 62472368 -4195637 - AluSg1 SINE Alu 0 309 1 14789 122 49 25 chr20 62472368 62472812 -4195193 + Tigger1 DNA MER2_type 54 486 -1932 8106 23 6 0 chr20 62472812 62473751 -4194254 + L1PA3 LINE L1 5212 6155 0 14789 122 49 25 chr20 62473751 62474536 -4193469 + Tigger1 DNA MER2_type 486 1251 -1167 2385 76 0 10 chr20 62474536 62474840 -4193165 + AluSg1 SINE Alu 1 301 -8 14789 122 49 25 chr20 62474840 62475914 -4192091 + Tigger1 DNA MER2_type 1251 2418 0 1965 257 47 63 chr20 62475914 62477636 -4190369 - L1MCc LINE L1 -3693 3249 1375 354 80 0 0 chr20 62479350 62479400 -4188605 + (CA)n Simple_repeat Simple_repeat 1 50 0 386 252 52 26 chr20 62479400 62479515 -4188490 + L1MC4 LINE L1 6705 6822 -1220 1102 115 0 0 chr20 62479612 62479768 -4188237 - AluJb SINE Alu 0 312 157 303 213 0 0 chr20 62479769 62479844 -4188161 + (TG)n Simple_repeat Simple_repeat 2 76 0 810 154 0 59 chr20 62479862 62479998 -4188007 - FLAM_C SINE Alu -5 128 1 279 276 133 73 chr20 62480106 62480519 -4187486 + LTR16A LTR ERVL 13 450 0 300 310 22 37 chr20 62481091 62481270 -4186735 + L1MC5 LINE L1 7095 7233 -728 837 329 117 10 chr20 62481575 62482095 -4185910 + MLT1K LTR MaLR 9 584 -4 27 0 0 0 chr20 62482180 62482207 -4185798 + AT_rich Low_complexity Low_complexity 1 27 0 523 286 192 16 chr20 62482607 62482883 -4185122 - L1MC/D LINE L1 -592 5572 5304 258 56 0 0 chr20 62482892 62482928 -4185077 + (CA)n Simple_repeat Simple_repeat 2 37 0 1971 185 12 61 chr20 62483086 62483496 -4184509 + MLT1B LTR MaLR 1 390 0 233 308 15 0 chr20 62484836 62484901 -4183104 + L2 LINE L2 3189 3254 -18 419 317 52 47 chr20 62485739 62486316 -4181689 + L1MEc LINE L1 1238 1817 -4579 2208 114 0 3 chr20 62486370 62486668 -4181337 + AluSq SINE Alu 1 297 -16 531 345 49 4 chr20 62486762 62487029 -4180976 - L1MCc LINE L1 -5981 1141 863 519 291 56 0 chr20 62487171 62487384 -4180621 + L1ME3A LINE L1 804 1028 -5368 1003 275 62 37 chr20 62487394 62488177 -4179828 + L1ME3A LINE L1 4849 5648 -583 227 175 0 70 chr20 62488252 62488309 -4179696 + L1ME3A LINE L1 5877 5929 -306 2387 92 0 13 chr20 62488323 62488638 -4179367 + AluY SINE Alu 1 311 0 351 244 44 8 chr20 62488834 62488981 -4179024 + L1ME3A LINE L1 6056 6211 -22 561 68 0 0 chr20 62489243 62489317 -4178688 + (GGAGA)n Simple_repeat Simple_repeat 1 74 0 362 62 38 50 chr20 62489317 62489397 -4178608 + (GGAA)n Simple_repeat Simple_repeat 2 80 0 314 340 108 21 chr20 62490102 62490632 -4177373 + L2 LINE L2 2149 2724 -590 443 290 166 55 chr20 62491021 62491455 -4176550 - L2 LINE L2 0 3313 2832 1621 264 49 34 chr20 62491484 62492158 -4175847 - L1MEc LINE L1 -4300 2822 2139 21 0 0 0 chr20 62492166 62492187 -4175818 + AT_rich Low_complexity Low_complexity 1 21 0 1457 247 104 5 chr20 62492250 62492692 -4175313 - L1MEc LINE L1 -5121 1302 817 544 314 108 5 chr20 62492810 62493033 -4174972 - L1MEc LINE L1 -5829 594 349 643 261 60 26 chr20 62493045 62493313 -4174692 - L1MEc LINE L1 -6109 314 38 271 324 223 30 chr20 62493444 62493949 -4174056 + L2 LINE L2 2658 3262 -51 1003 226 37 9 chr20 62494239 62494456 -4173549 - MER58A DNA MER1_type -1 223 1 * 2284 135 6 0 chr20 62494456 62494774 -4173231 + MER1B DNA MER1_type 20 339 0 246 316 68 0 chr20 62494967 62495084 -4172921 - MIR SINE MIR -14 248 124 2172 83 49 0 chr20 62495119 62495407 -4172598 - AluSp SINE Alu -7 306 5 367 208 40 30 chr20 62498911 62499012 -4168993 + MER5A DNA MER1_type 4 105 -84 328 296 96 22 chr20 62499343 62499478 -4168527 + MER5B DNA MER1_type 8 152 -26 252 185 0 0 chr20 62499659 62499713 -4168292 + (TG)n Simple_repeat Simple_repeat 2 55 0 21 0 0 0 chr20 62499938 62499959 -4168046 + AT_rich Low_complexity Low_complexity 1 21 0 1582 296 98 22 chr20 62501459 62501976 -4166029 - L1ME3A LINE L1 -5 6165 5688 2501 122 120 5 chr20 62501976 62502360 -4165645 + MSTA LTR MaLR 1 428 0 1582 296 98 22 chr20 62502360 62502978 -4165027 - L1ME3A LINE L1 -482 5688 4942 2467 230 109 39 chr20 62502987 62503289 -4164716 - L1ME1 LINE L1 -5 6161 5882 1881 106 0 0 chr20 62503289 62503582 -4164423 + AluSx SINE Alu 37 329 0 2467 230 109 39 chr20 62503582 62504586 -4163419 - L1ME1 LINE L1 -284 5882 4762 * 3691 211 66 23 chr20 62504584 62506068 -4161937 - L1MB7 LINE L1 -2 6251 4706 1717 268 39 57 chr20 62506069 62507357 -4160648 - L1MB7 LINE L1 -3473 2742 1535 2212 261 55 15 chr20 62507365 62508038 -4159967 + L1MDa LINE L1 697 1396 -5144 6874 132 70 24 chr20 62508040 62508422 -4159583 + Tigger3b DNA MER2_type 1 364 -2664 4675 39 2 2 chr20 62508422 62508955 -4159050 + L1PA4 LINE L1 5620 6152 -3 6874 132 70 24 chr20 62508955 62509142 -4158863 + Tigger3b DNA MER2_type 364 541 -2487 231 103 0 0 chr20 62509142 62509181 -4158824 + (TAAAA)n Simple_repeat Simple_repeat 2 40 0 6874 132 70 24 chr20 62509181 62509787 -4158218 + Tigger3b DNA MER2_type 541 1231 0 422 137 50 181 chr20 62509788 62509970 -4158035 + L1MDa LINE L1 1399 1556 -4987 753 288 66 73 chr20 62510205 62510672 -4157333 - L1MEd LINE L1 -4893 1226 766 2072 147 134 13 chr20 62510672 62511052 -4156953 - MSTA LTR MaLR -2 426 1 753 288 66 73 chr20 62511052 62511376 -4156629 - L1MEd LINE L1 -5353 766 441 364 305 150 53 chr20 62511868 62512261 -4155744 + L2 LINE L2 2883 3313 0 240 253 38 13 chr20 62512704 62512783 -4155222 - MLT1K LTR MaLR -38 550 470 508 305 215 36 chr20 62513339 62514137 -4153868 - L2 LINE L2 -5 3308 2358 22 0 0 0 chr20 62515795 62515817 -4152188 + AT_rich Low_complexity Low_complexity 1 22 0 661 261 41 67 chr20 62516418 62516732 -4151273 + MER113 DNA MER1_type? 77 382 -139 348 308 46 8 chr20 62516841 62516971 -4151034 - MIR3 SINE MIR -8 200 66 2176 113 3 3 chr20 62519322 62519615 -4148390 + AluSc SINE Alu 1 293 -16 22 0 0 0 chr20 62520094 62520116 -4147889 + AT_rich Low_complexity Low_complexity 1 22 0 2498 60 0 3 chr20 62520308 62520608 -4147397 - AluY SINE Alu -12 299 1 245 269 0 0 chr20 62521181 62521259 -4146746 + L1ME LINE L1 5794 5871 -299 256 128 64 0 chr20 62521943 62521990 -4146015 - L1MA8 LINE L1 -25 6266 6217 4387 183 44 30 chr20 62522019 62522470 -4145535 - L1MA9 LINE L1 -73 6239 5796 204 40 0 0 chr20 62522470 62522495 -4145510 + (CA)n Simple_repeat Simple_repeat 2 26 0 4387 183 44 30 chr20 62522495 62523147 -4144858 - L1MA9 LINE L1 -516 5796 5121 4369 169 14 91 chr20 62523150 62524214 -4143791 + L1MA9 LINE L1 4118 5099 -1047 1588 239 109 31 chr20 62524502 62524987 -4143018 - MLT1F LTR MaLR -11 531 9 282 282 153 70 chr20 62525399 62525686 -4142319 + L2 LINE L2 3003 3313 0 448 268 58 87 chr20 62526394 62526808 -4141197 - MLT1J LTR MaLR -1 510 109 337 236 57 38 chr20 62527040 62527146 -4140859 - L2 LINE L2 0 3272 3165 234 0 0 0 chr20 62527599 62527625 -4140380 + (TGAA)n Simple_repeat Simple_repeat 4 29 0 570 229 0 0 chr20 62528865 62529044 -4138961 + (CA)n Simple_repeat Simple_repeat 1 179 0 219 309 0 0 chr20 62529045 62529113 -4138892 + (CATATA)n Simple_repeat Simple_repeat 5 72 0 342 255 0 0 chr20 62529115 62529268 -4138737 + (CA)n Simple_repeat Simple_repeat 1 153 0 217 211 0 21 chr20 62529293 62529388 -4138617 + (CA)n Simple_repeat Simple_repeat 1 93 0 450 228 173 24 chr20 62529432 62529559 -4138446 - MER69 DNA AcHobo 0 2526 2381 241 218 0 0 chr20 62529695 62529750 -4138255 - MER69 DNA AcHobo -1171 55 1 982 250 65 70 chr20 62529886 62530497 -4137508 + L1MC5 LINE L1 7322 7929 -32 21 36 0 0 chr20 62531536 62531564 -4136441 + AT_rich Low_complexity Low_complexity 1 28 0 361 295 151 56 chr20 62531857 62532212 -4135793 - L1ME1 LINE L1 -284 5865 5461 2157 193 60 23 chr20 62532212 62532699 -4135306 + MLT1D LTR MaLR 1 505 0 361 295 151 56 chr20 62532699 62532773 -4135232 - L1ME1 LINE L1 -688 5461 5395 488 248 191 40 chr20 62532788 62533239 -4134766 - L1ME1 LINE L1 -751 5378 4860 401 281 48 0 chr20 62533304 62533450 -4134555 - L1ME1 LINE L1 -1445 4684 4532 272 242 15 83 chr20 62533458 62533590 -4134415 + L2 LINE L2 2052 2174 -1140 710 213 119 0 chr20 62533598 62533758 -4134247 - MER5A DNA MER1_type -4 185 7 248 198 81 93 chr20 62533783 62533869 -4134136 + L2 LINE L2 2208 2292 -1022 1113 277 68 53 chr20 62533917 62534602 -4133403 + L2 LINE L2 2463 3163 -150 397 286 80 28 chr20 62534681 62535069 -4132936 - L1ME1 LINE L1 -1596 4533 4126 475 288 105 7 chr20 62535150 62535303 -4132702 - MER5B DNA MER1_type -9 169 2 355 257 36 21 chr20 62535380 62535520 -4132485 - L1ME1 LINE L1 -5947 172 31 626 284 6 11 chr20 62535655 62535831 -4132174 + MER5B DNA MER1_type 1 175 -3 218 280 32 21 chr20 62535850 62535943 -4132062 + MER5B DNA MER1_type 77 170 -8 187 150 0 0 chr20 62536117 62536157 -4131848 - L2 LINE L2 -1 3312 3273 325 275 94 27 chr20 62536654 62536803 -4131202 - MIR3 SINE MIR -2 206 48 181 375 61 38 chr20 62537622 62537886 -4130119 - L2 LINE L2 -25 3247 2978 302 315 87 22 chr20 62538667 62538851 -4129154 - MER102a DNA MER1_type -10 320 125 629 229 52 0 chr20 62538866 62539019 -4128986 - LTR67 LTR ERVL -2 555 395 210 292 22 67 chr20 62539895 62539984 -4128021 + L2 LINE L2 3188 3272 0 209 333 49 41 chr20 62540860 62540983 -4127022 - L2 LINE L2 -4 3268 3145 790 184 53 37 chr20 62541459 62541649 -4126356 - L1ME2 LINE L1 -21 6143 5951 614 250 78 10 chr20 62541641 62541833 -4126172 - L1ME2 LINE L1 -460 5704 5500 * 1156 246 103 33 chr20 62541946 62542140 -4125865 - MER113 DNA MER1_type? 0 521 342 830 142 21 0 chr20 62542140 62542281 -4125724 - L1MD2 LINE L1 -1 6358 6215 1156 246 103 33 chr20 62542281 62542573 -4125432 - MER113 DNA MER1_type? -179 342 1 247 250 31 62 chr20 62542684 62542780 -4125225 - L2 LINE L2 0 3313 3221 408 331 98 11 chr20 62542819 62543175 -4124830 - L2 LINE L2 0 3313 2927 1782 208 76 14 chr20 62543481 62543914 -4124091 + MLT1C LTR MaLR 8 467 0 982 239 56 10 chr20 62544288 62544759 -4123246 + MLT1F1 LTR MaLR 1 558 -9 285 167 26 39 chr20 62544873 62544951 -4123054 + (TTCA)n Simple_repeat Simple_repeat 4 80 0 353 295 84 0 chr20 62544952 62545047 -4122958 - L2 LINE L2 -32 3240 3138 379 295 152 79 chr20 62545104 62545473 -4122532 - L2 LINE L2 -5 3267 2872 977 158 99 15 chr20 62545641 62545843 -4122162 - MER20 DNA MER1_type 0 219 1 2467 71 0 0 chr20 62546351 62546662 -4121343 + AluY SINE Alu 1 311 0 271 271 133 36 chr20 62546847 62547013 -4120992 + MIR3 SINE MIR 20 201 -7 185 83 28 0 chr20 62547706 62547742 -4120263 + (CA)n Simple_repeat Simple_repeat 1 37 0 264 197 13 26 chr20 62547749 62547825 -4120180 + (CATA)n Simple_repeat Simple_repeat 4 78 0 238 200 34 11 chr20 62547870 62548045 -4119960 + (CA)n Simple_repeat Simple_repeat 2 180 0 213 217 39 13 chr20 62548109 62548342 -4119663 + (CA)n Simple_repeat Simple_repeat 1 239 0 244 342 33 25 chr20 62548350 62548470 -4119535 + L2 LINE L2 2938 3058 -255 217 171 0 0 chr20 62548649 62548690 -4119315 + L2 LINE L2 3273 3313 0 351 316 101 28 chr20 62549135 62549353 -4118652 - MIR SINE MIR 0 262 29 24 32 0 0 chr20 62551221 62551252 -4116753 + AT_rich Low_complexity Low_complexity 1 31 0 255 243 43 0 chr20 62551268 62551338 -4116667 - MIR SINE MIR -11 251 179 533 286 87 28 chr20 62551432 62551719 -4116286 + LTR16A LTR ERVL 56 359 -91 181 79 0 53 chr20 62551719 62551757 -4116248 + (TCC)n Simple_repeat Simple_repeat 2 37 0 462 211 11 23 chr20 62551774 62551949 -4116056 + CT-rich Low_complexity Low_complexity 2 174 0 28 48 0 0 chr20 62552017 62552059 -4115946 + AT_rich Low_complexity Low_complexity 1 42 0 215 313 0 17 chr20 62552282 62552396 -4115609 - MIR SINE MIR -107 101 7 296 228 150 94 chr20 62553882 62554009 -4113996 - L2 LINE L2 -13 3300 3167 529 327 140 12 chr20 62554547 62554883 -4113122 - MLT1K LTR MaLR -128 460 82 656 98 22 0 chr20 62554930 62555022 -4112983 - LTR12 LTR ERV1 -131 583 490 328 172 61 20 chr20 62555022 62555121 -4112884 - LTR30 LTR ERV1 -67 655 553 992 156 36 104 chr20 62555122 62555372 -4112633 - LTR12 LTR ERV1 -429 285 53 267 231 0 0 chr20 62555372 62555424 -4112581 - LTR30 LTR ERV1 -670 52 1 268 296 37 0 chr20 62556218 62556299 -4111706 + MLT1K LTR MaLR 82 165 -423 204 294 29 15 chr20 62556424 62556492 -4111513 - MIR SINE MIR -95 113 45 1102 167 16 21 chr20 62556615 62556807 -4111198 - MLT1D LTR MaLR 0 505 315 703 100 53 11 chr20 62556808 62557001 -4111004 + CT-rich Low_complexity Low_complexity 1 201 0 1103 202 95 41 chr20 62557001 62557318 -4110687 - MLT1D LTR MaLR -171 334 1 26 64 0 0 chr20 62558025 62558072 -4109933 + AT_rich Low_complexity Low_complexity 1 47 0 313 326 175 21 chr20 62558719 62559044 -4108961 - L2 LINE L2 -2 3270 2896 1722 245 72 19 chr20 62559184 62559726 -4108279 - L1ME1 LINE L1 -23 6143 5573 181 317 177 43 chr20 62559727 62560213 -4107792 - L2 LINE L2 -567 2747 2197 646 240 84 0 chr20 62561345 62561499 -4106506 + MER45A DNA AcHobo 10 176 -2 2095 231 15 13 chr20 62561577 62562036 -4105969 + MLT1C LTR MaLR 6 465 -2 2774 13 0 0 chr20 62563384 62563695 -4104310 - AluYa5 SINE Alu 0 311 1 5884 185 52 20 chr20 62564034 62564595 -4103410 + L1MC3 LINE L1 5449 5990 -1795 1934 119 44 0 chr20 62564595 62564889 -4103116 - AluSc SINE Alu 0 309 3 5884 185 52 20 chr20 62564889 62565593 -4102412 + L1MC3 LINE L1 5990 6755 -1030 189 341 118 22 chr20 62566082 62566217 -4101788 - L2 LINE L2 -28 3244 3097 953 276 43 38 chr20 62566406 62566776 -4101229 + MLT1K LTR MaLR 164 535 -53 189 271 14 43 chr20 62567272 62567342 -4100663 + L2 LINE L2 3141 3208 -64 611 203 16 16 chr20 62567941 62568069 -4099936 + MIR SINE MIR 116 243 -19 2307 127 3 3 chr20 62568856 62569194 -4098811 - L1PA15 LINE L1 -11 6154 5817 191 244 0 0 chr20 62571278 62571319 -4096686 + MIR SINE MIR 84 124 -84 4174 206 50 25 chr20 62571531 62572536 -4095469 - L1MC3 LINE L1 0 7785 6756 238 260 41 14 chr20 62572617 62572690 -4095315 - MIR SINE MIR -59 203 129 2156 120 0 0 chr20 62574455 62574764 -4093241 + AluSx SINE Alu 1 309 -3 1897 232 150 23 chr20 62575162 62575736 -4092269 - MLT1E1 LTR MaLR 0 654 8 185 388 25 0 chr20 62576869 62576949 -4091056 + L2 LINE L2 3227 3308 -5 248 240 42 10 chr20 62577173 62577269 -4090736 - MER113 DNA MER1_type? -422 99 1 336 284 48 39 chr20 62577272 62577480 -4090525 - L1ME LINE L1 -341 5780 5571 264 59 0 0 chr20 62577690 62577724 -4090281 + (TC)n Simple_repeat Simple_repeat 2 35 0 682 266 77 28 chr20 62578278 62578631 -4089374 + MER113 DNA MER1_type? 42 411 -110 2270 201 8 109 chr20 62578783 62579526 -4088479 + L1 LINE L1 3818 4485 -1661 1564 128 0 21 chr20 62579554 62579797 -4088208 - AluSx SINE Alu -74 238 1 2696 192 96 4 chr20 62579797 62580360 -4087645 - L1MB2 LINE L1 -15 6156 5542 232 275 8 137 chr20 62580873 62581004 -4087001 + MIR SINE MIR 118 231 -31 432 209 8 15 chr20 62581009 62581143 -4086862 + CT-rich Low_complexity Low_complexity 5 137 0 2276 129 91 15 chr20 62581185 62581581 -4086424 + MSTA LTR MaLR 1 426 -2 284 233 289 0 chr20 62582006 62582096 -4085909 + L2 LINE L2 3197 3312 -1 210 248 12 36 chr20 62582290 62582376 -4085629 + L2 LINE L2 2917 2998 -274 262 320 167 0 chr20 62583550 62583660 -4084345 + MIR SINE MIR 13 145 -63 2536 123 3 8 chr20 62585240 62585606 -4082399 + THE1B LTR MaLR 1 364 0 214 348 0 0 chr20 62585681 62585750 -4082255 - L2 LINE L2 -3 3269 3201 271 348 58 40 chr20 62585953 62586177 -4081828 - MIR SINE MIR -33 229 2 23 0 0 0 chr20 62586276 62586299 -4081706 + AT_rich Low_complexity Low_complexity 1 23 0 851 143 49 85 chr20 62586547 62586770 -4081235 + MER20 DNA MER1_type 1 215 -4 192 289 144 10 chr20 62588564 62588661 -4079344 + MIR SINE MIR 117 226 -36 2072 120 7 0 chr20 62588887 62589170 -4078835 - AluSx SINE Alu -27 285 1 1599 232 134 30 chr20 62589321 62589860 -4078145 - L1MD3 LINE L1 -10 8403 7809 427 237 21 10 chr20 62589862 62589959 -4078046 - MER58 DNA MER1_type -3 2417 2320 219 69 0 0 chr20 62589984 62590013 -4077992 + (A)n Simple_repeat Simple_repeat 1 29 0 414 277 89 0 chr20 62590100 62590212 -4077793 - MLT1F1 LTR MaLR -443 124 3 4881 254 53 40 chr20 62590216 62591626 -4076379 - L1MD3 LINE L1 -719 7694 6256 1996 144 79 22 chr20 62591626 62591981 -4076024 + THE1C LTR MaLR 1 375 0 4881 254 53 40 chr20 62591981 62592297 -4075708 - L1MD3 LINE L1 -2157 6256 5946 7965 248 63 49 chr20 62592304 62595512 -4072493 - L1MD3 LINE L1 -1302 5262 1848 890 178 0 0 chr20 62595512 62595647 -4072358 - FRAM SINE Alu -41 135 1 7965 248 63 49 chr20 62595647 62596353 -4071652 - L1MD3 LINE L1 -4716 1848 1153 459 269 101 19 chr20 62596349 62596557 -4071448 - L1MD3 LINE L1 -5195 850 626 * 248 284 0 15 chr20 62596594 62596661 -4071344 - L1M4 LINE L1 -2297 3849 3784 233 324 53 72 chr20 62598998 62599205 -4068800 - L2 LINE L2 -160 3112 2910 198 245 208 28 chr20 62599366 62599472 -4068533 + MIR SINE MIR 67 191 -71 * 305 310 216 26 chr20 62599458 62599800 -4068205 + L2 LINE L2 1414 1820 -1494 2184 195 23 12 chr20 62599815 62600298 -4067707 - MER69 DNA AcHobo 0 2526 2039 1502 237 144 15 chr20 62600333 62600798 -4067207 - MER69 DNA AcHobo -1958 568 44 1349 296 116 26 chr20 62600907 62601683 -4066322 + L2 LINE L2 2033 2878 -436 280 297 108 9 chr20 62601693 62601804 -4066201 + L2 LINE L2 3137 3258 -14 261 298 16 81 chr20 62603221 62603325 -4064680 + MIR SINE MIR 34 119 -89 1052 155 34 117 chr20 62603325 62603564 -4064441 - MER20 DNA MER1_type 0 219 1 261 298 16 81 chr20 62603564 62603583 -4064422 + MIR SINE MIR 119 138 -70 2998 186 21 36 chr20 62604334 62604543 -4063462 - L1MD1 LINE L1 0 6242 6031 2874 99 11 5 chr20 62604543 62604916 -4063089 + THE1C LTR MaLR 1 375 0 2998 186 21 36 chr20 62604916 62605019 -4062986 - L1MD1 LINE L1 -211 6031 5928 1750 227 45 78 chr20 62605019 62605592 -4062413 + MLT2B3 LTR ERVL 1 554 0 2998 186 21 36 chr20 62605592 62605908 -4062097 - L1MD1 LINE L1 -314 5928 5623 2126 209 62 32 chr20 62605908 62606535 -4061470 - L1MDa LINE L1 -4796 1744 1099 851 251 25 42 chr20 62606532 62606691 -4061314 - L1MDa LINE L1 -6170 370 217 * 2081 132 35 57 chr20 62606691 62607063 -4060942 - THE1B LTR MaLR 0 364 1 851 251 25 42 chr20 62607063 62607186 -4060819 - L1MDa LINE L1 -6323 217 93 327 243 40 27 chr20 62607187 62607335 -4060670 + (TATATG)n Simple_repeat Simple_repeat 3 152 0 321 284 11 0 chr20 62607335 62607423 -4060582 - L1MDa LINE L1 -6435 105 17 182 273 45 34 chr20 62607479 62607567 -4060438 + MIR SINE MIR 76 164 -98 224 290 29 0 chr20 62607863 62607932 -4060073 + MER5A DNA MER1_type 113 183 -6 2275 128 0 0 chr20 62607942 62608254 -4059751 + AluSx SINE Alu 1 312 0 2194 137 45 28 chr20 62609874 62610232 -4057773 - THE1B LTR MaLR 0 364 1 2008 101 11 11 chr20 62610507 62610793 -4057212 + AluSg1 SINE Alu 1 286 -23 1646 105 0 0 chr20 62610800 62611010 -4056995 - AluSg SINE Alu -96 214 5 189 284 95 60 chr20 62611226 62611342 -4056663 + MIR SINE MIR 22 141 -121 307 395 9 0 chr20 62614912 62615026 -4052979 + L2 LINE L2 3134 3248 -24 201 330 128 32 chr20 62615272 62615366 -4052639 + MIR SINE MIR 158 260 -2 211 304 82 57 chr20 62617139 62617297 -4050708 + MIR SINE MIR 31 192 -70 4494 54 2 9 chr20 62617985 62618519 -4049486 - L1PA4 LINE L1 -2 6153 5624 1988 222 43 49 chr20 62619035 62619588 -4048417 - MLT2B3 LTR ERVL -4 550 1 24 32 0 0 chr20 62620669 62620700 -4047305 + AT_rich Low_complexity Low_complexity 1 31 0 462 18 0 0 chr20 62621325 62621380 -4046625 + (CA)n Simple_repeat Simple_repeat 2 56 0 23 0 0 0 chr20 62621508 62621531 -4046474 + AT_rich Low_complexity Low_complexity 1 23 0 25 31 0 0 chr20 62621675 62621707 -4046298 + AT_rich Low_complexity Low_complexity 1 32 0 208 143 0 0 chr20 62622064 62622099 -4045906 + (T)n Simple_repeat Simple_repeat 1 35 0 2739 204 74 9 chr20 62622422 62622987 -4045018 + LTR26 LTR ERV1 1 602 -1 5205 39 2 0 chr20 62623165 62623788 -4044217 + L1PA3 LINE L1 5548 6155 0 1786 97 12 8 chr20 62624640 62624888 -4043117 - Charlie3 DNA MER1_type -4 2706 2458 1286 116 0 6 chr20 62624891 62625072 -4042933 - AluSg SINE Alu -130 180 1 291 189 0 0 chr20 62625074 62625127 -4042878 - MSTA LTR MaLR -375 53 1 1683 176 21 115 chr20 62625785 62625961 -4042044 + MLT1B LTR MaLR 1 192 -198 2227 117 0 0 chr20 62625961 62626252 -4041753 + AluSq SINE Alu 1 291 -22 1683 176 21 115 chr20 62626252 62626502 -4041503 + MLT1B LTR MaLR 192 387 -3 347 283 25 38 chr20 62626595 62626754 -4041251 + MER5A DNA MER1_type 15 171 -18 668 96 0 0 chr20 62626757 62626851 -4041154 - L1MA4A LINE L1 -2 6301 6208 362 105 70 0 chr20 62626899 62626956 -4041049 + L1MA4A LINE L1 6208 6268 -35 4319 37 0 0 chr20 62626956 62627429 -4040576 + L1PA4 LINE L1 5670 6152 -3 311 282 250 13 chr20 62627584 62627740 -4040265 + MIR SINE MIR 48 240 -22 2416 81 0 7 chr20 62627871 62628179 -4039826 - AluY SINE Alu -5 306 1 246 62 0 0 chr20 62628421 62628453 -4039552 + (GGAA)n Simple_repeat Simple_repeat 4 35 0 633 123 6 37 chr20 62628475 62628637 -4039368 + (GGAA)n Simple_repeat Simple_repeat 3 159 0 331 116 0 29 chr20 62628659 62628728 -4039277 + (GGAA)n Simple_repeat Simple_repeat 2 68 0 757 301 55 0 chr20 62629275 62629474 -4038531 - REP3 LTR ERV -31 531 322 2223 275 137 15 chr20 62629475 62630684 -4037321 + L1ME3 LINE L1 2805 4161 -1985 557 283 173 4 chr20 62630670 62630896 -4037109 + L1ME3 LINE L1 5540 5803 -367 * 611 232 45 2 chr20 62630902 62631097 -4036908 - MER58 DNA MER1_type 0 2420 3 713 266 105 27 chr20 62631098 62631432 -4036573 + L1ME3 LINE L1 5801 6160 -2 396 266 33 13 chr20 62631605 62631764 -4036241 + L1ME4a LINE L1 5705 5866 -255 1022 113 0 0 chr20 62631970 62632103 -4035902 - FLAM_C SINE Alu 0 133 1 233 270 67 0 chr20 62632409 62632498 -4035507 - L2 LINE L2 -3 3269 3175 714 202 0 0 chr20 62634971 62635149 -4032856 + (CA)n Simple_repeat Simple_repeat 1 178 0 183 300 0 0 chr20 62637237 62637297 -4030708 - MIR SINE MIR -114 148 89 1617 216 82 23 chr20 62637974 62638447 -4029558 - MLT1D LTR MaLR -4 501 1 250 330 62 0 chr20 62639435 62639547 -4028458 - L2 LINE L2 0 3272 3154 2264 86 0 7 chr20 62640407 62640764 -4027241 - AluY SINE Alu 0 311 1 426 305 0 21 chr20 62641408 62641549 -4026456 - MER5A DNA MER1_type -22 167 30 231 250 54 11 chr20 62641653 62641745 -4026260 - MER5A DNA MER1_type -84 105 10 281 365 55 0 chr20 62641893 62642038 -4025967 - MER117 DNA MER1_type -1 196 44 2285 123 6 3 chr20 62644997 62645339 -4022666 + L1PA13 LINE L1 5810 6152 -11 219 329 14 0 chr20 62645606 62645679 -4022326 - L3 LINE CR1 -149 1428 1355 4114 89 9 22 chr20 62646077 62646660 -4021345 - L1PA10 LINE L1 -4 6164 5590 323 278 95 32 chr20 62646778 62646904 -4021101 + MER5B DNA MER1_type 45 178 0 257 281 58 36 chr20 62647656 62647795 -4020210 + MER5B DNA MER1_type 29 170 -8 250 339 91 0 chr20 62648031 62648152 -4019853 + L2 LINE L2 3165 3296 -17 213 180 20 0 chr20 62648213 62648263 -4019742 - MIR SINE MIR -77 131 81 204 158 0 0 chr20 62648754 62648792 -4019213 + (CATA)n Simple_repeat Simple_repeat 2 39 0 255 218 39 13 chr20 62648799 62648877 -4019128 + (TATATG)n Simple_repeat Simple_repeat 5 84 0 579 264 50 54 chr20 62648878 62649117 -4018888 - MIR SINE MIR -11 251 14 733 208 6 3 chr20 62649129 62649493 -4018512 + (ATG)n Simple_repeat Simple_repeat 1 365 0 377 257 7 0 chr20 62649512 62649664 -4018341 + (ATG)n Simple_repeat Simple_repeat 1 153 0 520 274 132 0 chr20 62649671 62649861 -4018144 - MIR SINE MIR -10 252 38 258 217 24 36 chr20 62650970 62651053 -4016952 + GA-rich Low_complexity Low_complexity 3 84 0 26 0 0 0 chr20 62651281 62651307 -4016698 + AT_rich Low_complexity Low_complexity 1 26 0 225 315 7 70 chr20 62651828 62651971 -4016034 - MIR3 SINE MIR -71 137 4 252 226 19 0 chr20 62652120 62652173 -4015832 + Tigger5 DNA MER2_type 2 55 -2268 * 254 267 13 53 chr20 62652143 62652218 -4015787 + Tigger5 DNA MER2_type 2251 2322 -1 294 244 112 39 chr20 62652265 62652538 -4015467 + L1M2 LINE L1 5254 5556 -756 2607 59 0 0 chr20 62652724 62653028 -4014977 + AluY SINE Alu 1 304 -7 26 0 0 0 chr20 62653237 62653263 -4014742 + AT_rich Low_complexity Low_complexity 1 26 0 536 292 43 74 chr20 62654407 62654852 -4013153 - L2 LINE L2 -11 3302 2872 307 291 12 0 chr20 62655003 62655089 -4012916 + L2 LINE L2 3186 3272 0 226 316 90 47 chr20 62655269 62655503 -4012502 - MIR SINE MIR 0 262 19 249 273 13 13 chr20 62655903 62655980 -4012025 + CT-rich Low_complexity Low_complexity 3 79 0 264 314 57 7 chr20 62655981 62656121 -4011884 + MLT1J2 LTR MaLR 110 256 -194 222 62 0 0 chr20 62656121 62656153 -4011852 + (TTG)n Simple_repeat Simple_repeat 3 34 0 1101 216 20 5 chr20 62656183 62656387 -4011618 - MER58A DNA MER1_type -17 207 1 252 209 275 11 chr20 62656408 62656499 -4011506 + MLT1J2 LTR MaLR 280 394 -56 1422 229 119 30 chr20 62657510 62657973 -4010032 + MLT1D LTR MaLR 1 504 -1 345 284 121 23 chr20 62658045 62658260 -4009745 - MIR SINE MIR -14 248 13 697 213 16 0 chr20 62660209 62660454 -4007551 + (ATG)n Simple_repeat Simple_repeat 1 249 0 568 207 0 18 chr20 62660454 62660623 -4007382 + (ATGGTG)n Simple_repeat Simple_repeat 4 169 0 281 248 28 0 chr20 62660627 62660772 -4007233 + (ATG)n Simple_repeat Simple_repeat 1 149 0 545 140 32 32 chr20 62660785 62660942 -4007063 + (ATG)n Simple_repeat Simple_repeat 2 158 0 987 258 10 0 chr20 62660977 62661186 -4006819 + MER58A DNA MER1_type 1 211 -13 228 242 101 50 chr20 62661280 62661379 -4006626 + MER21B LTR ERV1 1 104 -759 2448 244 84 38 chr20 62661400 62662146 -4005859 + MER21B LTR ERV1 22 802 -61 333 276 81 60 chr20 62663453 62663478 -4004527 - L1ME4a LINE L1 -14 6107 6084 234 0 0 0 chr20 62663478 62663504 -4004501 + (TG)n Simple_repeat Simple_repeat 2 27 0 333 276 81 60 chr20 62663504 62663518 -4004487 - L1ME4a LINE L1 -37 6084 6072 1689 163 20 10 chr20 62663518 62663813 -4004192 - AluJb SINE Alu -14 298 1 333 276 81 60 chr20 62663813 62664141 -4003864 - L1ME4a LINE L1 -49 6072 5731 318 209 33 33 chr20 62664991 62665082 -4002923 + L1MC5 LINE L1 7835 7925 -36 291 54 0 0 chr20 62666775 62666812 -4001193 + (TC)n Simple_repeat Simple_repeat 1 37 0 230 269 233 47 chr20 62667017 62667382 -4000623 - L2 LINE L2 -49 3264 2832 203 335 211 0 chr20 62668075 62668236 -3999769 - MIR SINE MIR -54 208 14 541 259 38 1 chr20 62669682 62669862 -3998143 - L1MD2 LINE L1 -14 7968 6194 404 237 0 11 chr20 62670478 62670571 -3997434 - MER5A DNA MER1_type -87 102 11 521 289 6 6 chr20 62670719 62670885 -3997120 + MIR SINE MIR 84 249 -13 769 197 6 6 chr20 62670954 62671067 -3996938 + (ATG)n Simple_repeat Simple_repeat 1 112 -557 2579 77 0 0 chr20 62671067 62671378 -3996627 + AluY SINE Alu 1 311 0 769 197 6 6 chr20 62671378 62671623 -3996382 + (ATG)n Simple_repeat Simple_repeat 112 669 0 488 216 7 0 chr20 62671637 62671785 -3996220 + (ATG)n Simple_repeat Simple_repeat 2 150 0 2595 64 0 3 chr20 62672872 62673184 -3994821 + AluY SINE Alu 1 311 0 1790 155 26 7 chr20 62673274 62673583 -3994422 - L1PA16 LINE L1 -7 6159 5845 2391 49 3 33 chr20 62673626 62673933 -3994072 - AluY SINE Alu -13 298 1 6211 54 11 4 chr20 62674259 62675024 -3992981 - L1PA8 LINE L1 -1 6171 5402 503 228 150 6 chr20 62675169 62675349 -3992656 + MLT1B LTR MaLR 66 271 -119 2331 171 55 24 chr20 62675352 62675803 -3992202 - MLT1C LTR MaLR 0 467 3 212 283 232 0 chr20 62675830 62675929 -3992076 + L2 LINE L2 3187 3308 -5 2110 101 0 14 chr20 62675941 62676228 -3991777 + AluSc SINE Alu 1 283 -26 187 371 26 35 chr20 62676278 62676394 -3991611 - L2 LINE L2 -3 3269 3155 667 174 0 45 chr20 62676696 62676807 -3991198 + L1MB3 LINE L1 6035 6139 -44 2177 139 0 0 chr20 62676807 62677110 -3990895 + AluSq SINE Alu 1 303 -10 667 174 0 45 chr20 62677110 62677153 -3990852 + L1MB3 LINE L1 6139 6182 -1 1786 125 8 0 chr20 62677373 62677621 -3990384 + AluY SINE Alu 41 290 -21 3363 243 100 15 chr20 62678464 62680037 -3987968 - L1M4 LINE L1 -2941 3703 1997 5689 167 33 8 chr20 62680067 62681393 -3986612 - L1MA6 LINE L1 -2 6298 4936 1450 269 42 49 chr20 62681389 62681971 -3986034 - L1M4 LINE L1 -5938 604 25 * 1580 113 36 0 chr20 62681971 62682192 -3985813 + MER30 DNA MER1_type 2 230 0 1450 269 42 49 chr20 62682192 62682203 -3985802 - L1M4 LINE L1 -6517 25 15 1194 216 56 83 chr20 62682292 62682427 -3985578 + MLT1B LTR MaLR 3 140 -250 2653 137 5 0 chr20 62682427 62682837 -3985168 + L1PA13 LINE L1 5750 6161 -2 1194 216 56 83 chr20 62682837 62683108 -3984897 + MLT1B LTR MaLR 140 390 0 346 226 90 45 chr20 62683710 62683843 -3984162 - L2 LINE L2 0 3313 3175 589 163 15 0 chr20 62684662 62684797 -3983208 + CT-rich Low_complexity Low_complexity 1 137 0 237 263 35 82 chr20 62686554 62686725 -3981280 - L2 LINE L2 -334 2979 2817 351 225 87 81 chr20 62686823 62686996 -3981009 + L2 LINE L2 3133 3306 -7 351 0 0 0 chr20 62687614 62687653 -3980352 + (T)n Simple_repeat Simple_repeat 1 39 0 195 375 10 10 chr20 62687840 62687936 -3980069 + L2 LINE L2 3217 3312 -1 8552 201 85 50 chr20 62688018 62690707 -3977298 - L1MC3 LINE L1 -8 7777 5008 1773 190 6 0 chr20 62690721 62691052 -3976953 - L1PA16 LINE L1 -3 6163 5831 249 214 0 0 chr20 62691175 62691231 -3976774 + (TA)n Simple_repeat Simple_repeat 1 56 0 1500 191 38 90 chr20 62692049 62692525 -3975480 - L1MC3 LINE L1 -762 7023 6573 244 163 102 0 chr20 62692546 62692595 -3975410 - L1MC3 LINE L1 -1144 6641 6588 257 185 77 15 chr20 62692673 62692738 -3975267 - L1MC3 LINE L1 -1144 6641 6573 * 322 171 14 14 chr20 62692714 62692784 -3975221 - L1MC3 LINE L1 -1144 6641 6572 445 126 58 0 chr20 62692804 62692891 -3975114 - L1MC3 LINE L1 -1144 6641 6550 417 158 0 95 chr20 62692895 62692990 -3975015 + LTR16C LTR ERVL 402 487 -4 306 342 17 17 chr20 62695307 62695427 -3972578 + L2 LINE L2 3152 3271 -1 426 276 89 0 chr20 62695906 62696029 -3971976 - L2 LINE L2 0 3272 3139 558 344 35 13 chr20 62696814 62697041 -3970964 + MIR SINE MIR 1 232 -30 268 198 9 179 chr20 62698161 62698267 -3969738 - MER5A DNA MER1_type -23 166 79 368 329 48 35 chr20 62698704 62698935 -3969070 + MIR SINE MIR 1 234 -28 374 233 252 6 chr20 62699284 62699443 -3968562 + LTR16A1 LTR ERVL 246 443 -14 216 0 0 0 chr20 62700086 62700110 -3967895 + (A)n Simple_repeat Simple_repeat 1 24 0 191 243 0 27 chr20 62700389 62700463 -3967542 + CT-rich Low_complexity Low_complexity 2 73 0 283 302 60 4 chr20 62700559 62700682 -3967323 - MIR SINE MIR -48 160 30 270 346 59 22 chr20 62701720 62701856 -3966149 + L2 LINE L2 3173 3313 0 234 0 0 0 chr20 62702696 62702722 -3965283 + (A)n Simple_repeat Simple_repeat 1 26 0 251 312 43 7 chr20 62702818 62702956 -3965049 + LTR16C LTR ERVL 336 478 -13 387 222 37 12 chr20 62704755 62704984 -3963021 + (TATATG)n Simple_repeat Simple_repeat 1 234 0 306 253 21 119 chr20 62704987 62705181 -3962824 + L1MC4 LINE L1 6528 6702 -1340 424 232 11 28 chr20 62705181 62705362 -3962643 + (TA)n Simple_repeat Simple_repeat 2 179 0 271 103 5 98 chr20 62705401 62705595 -3962410 + (ATATG)n Simple_repeat Simple_repeat 3 178 0 219 267 163 12 chr20 62705853 62705939 -3962066 + MIR SINE MIR 89 187 -75 192 77 0 0 chr20 62706417 62706443 -3961562 + (TCCC)n Simple_repeat Simple_repeat 3 28 0 345 47 0 0 chr20 62706443 62706486 -3961519 + (TG)n Simple_repeat Simple_repeat 2 44 0 815 237 106 0 chr20 62706955 62707153 -3960852 - MER58A DNA MER1_type -5 219 1 2454 148 77 7 chr20 62707296 62707750 -3960255 + MER66B LTR ERV1 1 486 0 1699 173 0 0 chr20 62708820 62709138 -3958867 + AluSx SINE Alu 1 318 0 2199 114 0 0 chr20 62709668 62709967 -3958038 - AluSx SINE Alu -13 299 1 3239 164 220 19 chr20 62710245 62711091 -3956914 + MER52C LTR ERV1 1 1278 0 2726 216 101 25 chr20 62711278 62712082 -3955923 + L1ME1 LINE L1 5299 6166 0 22 0 0 30 chr20 62712082 62712094 -3955911 + AT_rich Low_complexity Low_complexity 1 12 -20 2086 96 21 0 chr20 62712094 62712376 -3955629 - AluSc SINE Alu -21 288 1 22 0 0 30 chr20 62712376 62712396 -3955609 + AT_rich Low_complexity Low_complexity 12 32 0 281 328 123 20 chr20 62713369 62713564 -3954441 + MIR SINE MIR 33 247 -15 453 291 71 22 chr20 62714386 62714568 -3953437 + L2 LINE L2 3122 3312 -1 596 152 18 30 chr20 62714569 62714734 -3953271 + GA-rich Low_complexity Low_complexity 1 163 0 1853 133 33 0 chr20 62714764 62715095 -3952910 + AluY SINE Alu 1 341 0 342 256 12 6 chr20 62715124 62715284 -3952721 + (TGGA)n Simple_repeat Simple_repeat 4 164 0 485 306 101 10 chr20 62716147 62716356 -3951649 + L3 LINE CR1 1129 1356 -221 515 313 139 44 chr20 62716366 62716866 -3951139 + L2 LINE L2 2766 3313 0 974 248 101 6 chr20 62718040 62718543 -3949462 + MER92B LTR ERV1 8 623 -13 198 339 94 18 chr20 62718549 62718720 -3949285 - MIR3 SINE MIR -4 204 21 531 270 0 0 chr20 62719106 62719243 -3948762 - L1MA10 LINE L1 -212 5977 5841 * 1396 202 60 29 chr20 62719237 62719584 -3948421 + L1MA10 LINE L1 5975 6332 -2 238 293 16 16 chr20 62719854 62719977 -3948028 + (TA)n Simple_repeat Simple_repeat 2 124 0 251 357 24 16 chr20 62720023 62720149 -3947856 - MIR SINE MIR -107 155 29 2290 210 55 32 chr20 62720313 62720898 -3947107 - Charlie1a DNA MER1_type -302 1153 556 338 197 26 0 chr20 62720902 62720978 -3947027 - L1MC2 LINE L1 -13 6331 6254 2886 152 23 65 chr20 62721000 62721226 -3946779 - L1MC3 LINE L1 -152 7633 7399 2140 148 50 6 chr20 62721226 62721585 -3946420 - THE1C LTR MaLR 0 375 1 2886 152 23 65 chr20 62721585 62721956 -3946049 - L1MC3 LINE L1 -386 7399 7061 1858 270 28 23 chr20 62721958 62722524 -3945481 - Charlie1a DNA MER1_type -886 569 1 768 278 108 23 chr20 62723441 62723830 -3944175 - MLT1L LTR MaLR -23 592 171 202 279 58 115 chr20 62724166 62724270 -3943735 + L3 LINE CR1 1478 1575 -2 252 0 0 0 chr20 62724606 62724634 -3943371 + (AGATG)n Simple_repeat Simple_repeat 3 30 0 959 221 161 82 chr20 62725762 62726249 -3941756 + MLT1E LTR MaLR 1 630 -24 322 114 0 0 chr20 62726323 62726367 -3941638 + MER5A DNA MER1_type 2 45 -144 842 239 0 0 chr20 62726434 62726601 -3941404 + MER5A DNA MER1_type 21 187 -2 293 241 41 69 chr20 62726601 62726746 -3941259 - MLT1K LTR MaLR 0 588 448 254 322 48 17 chr20 62726911 62727027 -3940978 - MIR SINE MIR -62 146 34 185 0 40 0 chr20 62729522 62729547 -3938458 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 279 312 63 67 chr20 62729584 62729869 -3938136 - MLT1K LTR MaLR -14 574 291 359 278 174 52 chr20 62729961 62730191 -3937814 + MER20B DNA MER1_type 71 328 -455 1698 183 88 48 chr20 62730291 62730516 -3937489 - MSTB LTR MaLR -12 414 165 2300 61 0 0 chr20 62730516 62730795 -3937210 - AluY SINE Alu -32 279 1 1698 183 88 48 chr20 62730795 62730967 -3937038 - MSTB LTR MaLR -261 165 1 617 179 73 7 chr20 62731080 62731231 -3936774 + MER20B DNA MER1_type 552 712 -71 774 247 171 63 chr20 62731443 62731904 -3936101 - MLT2B1 LTR ERVL -8 512 2 238 226 0 48 chr20 62732188 62732250 -3935755 - MER20B DNA MER1_type -8 211 153 732 188 36 36 chr20 62732488 62732653 -3935352 - MER20B DNA MER1_type -54 165 1 244 369 81 0 chr20 62733857 62734055 -3933950 - MIR SINE MIR -17 245 32 199 321 18 0 chr20 62734309 62734365 -3933640 + L2 LINE L2 2697 2753 -561 347 268 97 47 chr20 62734387 62734831 -3933174 + L1ME2 LINE L1 3045 3510 -2636 1511 194 0 23 chr20 62734831 62735130 -3932875 + AluJo SINE Alu 1 292 -20 422 327 93 4 chr20 62735449 62735675 -3932330 - LTR16A LTR ERVL -89 361 116 2171 247 109 57 chr20 62735793 62736864 -3931141 + L1ME2 LINE L1 4306 5424 -774 1915 133 3 7 chr20 62736864 62737166 -3930839 - AluSx SINE Alu 0 312 12 2171 247 109 57 chr20 62737166 62737563 -3930442 + L1ME2 LINE L1 5424 5799 -399 483 292 117 19 chr20 62737603 62737867 -3930138 + L1ME2 LINE L1 5866 6155 -9 342 0 0 0 chr20 62738095 62738133 -3929872 + (TG)n Simple_repeat Simple_repeat 2 39 0 773 314 53 16 chr20 62738184 62738429 -3929576 + MIR SINE MIR 1 254 -8 261 327 82 0 chr20 62738536 62738646 -3929359 + MIR3 SINE MIR 42 160 -48 227 161 32 16 chr20 62738689 62738751 -3929254 + MER113 DNA MER1_type? 68 130 -391 829 227 0 12 chr20 62739578 62739750 -3928255 - MER58B DNA MER1_type -3 338 169 207 0 0 0 chr20 62740140 62740163 -3927842 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 440 86 21 86 chr20 62740174 62740267 -3927738 - L1MB7 LINE L1 -1 6183 6097 248 211 0 0 chr20 62740273 62740325 -3927680 - MER82 DNA MER2_type -8 645 594 446 274 225 52 chr20 62741885 62742272 -3925733 + MLT1K LTR MaLR 129 582 -6 2175 221 53 8 chr20 62743194 62743723 -3924282 - L1MB7 LINE L1 -15 6169 5617 372 321 0 9 chr20 62743808 62743917 -3924088 + MIR SINE MIR 48 155 -107 5858 140 11 9 chr20 62744304 62745987 -3922018 + L1MA3 LINE L1 4445 6131 -174 321 125 5 98 chr20 62745995 62746161 -3921844 + (TTTAA)n Simple_repeat Simple_repeat 1 150 -17 897 111 9 120 chr20 62746161 62746378 -3921627 + L1MA3 LINE L1 6111 6303 -2 321 125 5 98 chr20 62746378 62746395 -3921610 + (TTTAA)n Simple_repeat Simple_repeat 150 167 0 204 81 0 54 chr20 62746383 62746420 -3921585 + (TTTTTA)n Simple_repeat Simple_repeat 2 36 0 * 606 290 141 28 chr20 62746508 62746763 -3921242 + L1M4 LINE L1 3693 3976 -2170 7619 32 0 0 chr20 62746782 62748272 -3919733 - L1PA4 LINE L1 -3 6152 4662 180 0 0 0 chr20 62748772 62748792 -3919213 + (T)n Simple_repeat Simple_repeat 1 20 0 418 270 48 57 chr20 62748794 62748952 -3919053 - MIR SINE MIR -52 156 31 510 315 102 13 chr20 62749322 62749557 -3918448 - MIR SINE MIR 0 262 7 396 40 0 0 chr20 62750320 62750370 -3917635 + (TCCA)n Simple_repeat Simple_repeat 3 52 0 215 274 11 140 chr20 62750723 62750902 -3917103 - L2 LINE L2 -85 3187 3032 350 319 114 6 chr20 62750909 62751075 -3916930 + MIR SINE MIR 79 262 0 626 304 35 75 chr20 62751986 62752358 -3915647 - L2 LINE L2 0 3272 2916 579 300 35 44 chr20 62752973 62753214 -3914791 - MIR SINE MIR -4 258 18 238 333 39 0 chr20 62753287 62753365 -3914640 - L2 LINE L2 -2 3311 3231 1515 157 88 11 chr20 62753368 62753642 -3914363 + MLT1A1 LTR MaLR 1 295 -70 221 294 47 24 chr20 62753652 62753737 -3914268 - L2 LINE L2 -75 3238 3152 435 290 149 44 chr20 62753919 62754354 -3913651 - L2 LINE L2 -3 3310 2830 262 182 92 52 chr20 62754489 62754595 -3913410 - MIR SINE MIR -66 142 32 505 330 20 5 chr20 62755251 62755451 -3912554 + MIR SINE MIR 45 248 -14 2329 53 13 13 chr20 62756062 62756365 -3911640 - AluY SINE Alu -8 303 1 291 277 46 62 chr20 62756367 62756497 -3911508 - MER5A DNA MER1_type -4 185 58 3233 205 52 43 chr20 62756756 62757546 -3910459 - MLT1A1-int LTR MaLR -938 797 1 1523 219 24 35 chr20 62757546 62757915 -3910090 - MLT1A1 LTR MaLR 0 365 1 245 203 61 32 chr20 62758049 62758167 -3909838 + L1MC5 LINE L1 7859 8042 0 488 288 141 20 chr20 62758926 62759124 -3908881 + MIR SINE MIR 41 262 0 205 286 129 37 chr20 62759378 62759595 -3908410 + L2 LINE L2 2741 2977 -337 2123 113 0 0 chr20 62760983 62761275 -3906730 + AluSx SINE Alu 1 292 -20 202 162 0 27 chr20 62761967 62762004 -3906001 + L2 LINE L2 3267 3302 -11 382 267 101 51 chr20 62762314 62762710 -3905295 - L1MC4 LINE L1 -51 7910 7497 205 232 61 61 chr20 62762748 62762830 -3905175 - MIR SINE MIR -61 201 120 21 0 0 0 chr20 62765773 62765794 -3902211 + AT_rich Low_complexity Low_complexity 1 21 0 1136 277 115 31 chr20 62766205 62766682 -3901323 + MLT1H LTR MaLR 5 521 -28 225 219 0 37 chr20 62766720 62766802 -3901203 + CT-rich Low_complexity Low_complexity 2 80 0 498 197 47 24 chr20 62766915 62767042 -3900963 - Charlie1 DNA MER1_type -10 2751 2622 * 677 266 16 5 chr20 62767025 62767209 -3900796 - Charlie1 DNA MER1_type -2519 242 57 4069 159 38 3 chr20 62767334 62768021 -3899984 + MER50 LTR ERV1 1 711 -23 254 290 94 29 chr20 62768447 62768585 -3899420 - MIR SINE MIR -43 219 73 180 211 105 66 chr20 62768626 62768702 -3899303 - L2 LINE L2 0 3272 3194 588 265 105 24 chr20 62768887 62769382 -3898623 + MLT1G1 LTR MaLR 1 593 -2 194 128 26 0 chr20 62769715 62769754 -3898251 + (CTA)n Simple_repeat Simple_repeat 3 42 0 547 354 132 13 chr20 62771015 62771751 -3896254 - L2 LINE L2 -12 3301 2472 377 329 62 41 chr20 62771920 62772163 -3895842 + MIR SINE MIR 14 261 -1 216 158 0 0 chr20 62772168 62772206 -3895799 + (CAT)n Simple_repeat Simple_repeat 2 39 0 225 83 0 0 chr20 62772739 62772775 -3895230 + (CA)n Simple_repeat Simple_repeat 2 37 0 791 219 39 0 chr20 62772781 62772959 -3895046 + L1MD2 LINE L1 6145 6329 -30 228 167 0 100 chr20 62772972 62773032 -3894973 + L1MC4 LINE L1 6652 6705 -1337 305 324 88 40 chr20 62773198 62773596 -3894409 + L2 LINE L2 2358 2774 -540 2119 248 85 25 chr20 62773889 62774196 -3893809 - L1ME2 LINE L1 -2 6162 5875 2199 99 0 0 chr20 62774196 62774490 -3893515 - AluSx SINE Alu -18 294 1 2119 248 85 25 chr20 62774490 62774831 -3893174 - L1ME2 LINE L1 -289 5875 5475 1691 160 0 31 chr20 62775050 62775343 -3892662 - AluJo SINE Alu -23 289 6 1019 240 37 15 chr20 62775349 62775743 -3892262 - L1ME2 LINE L1 -728 5438 5036 672 249 162 20 chr20 62775983 62776180 -3891825 - MLT1H1 LTR MaLR -289 266 42 940 296 7 4 chr20 62776237 62776511 -3891494 - L1ME2 LINE L1 -1833 4313 4039 327 319 57 14 chr20 62776519 62776660 -3891345 + L2 LINE L2 3165 3311 -2 1754 225 131 19 chr20 62776696 62777122 -3890883 + MLT2B1 LTR ERVL 1 474 -46 2154 161 17 3 chr20 62777122 62777477 -3890528 + MER47A DNA MER2_type 2 361 -5 268 182 0 0 chr20 62777501 62777556 -3890449 + MLT2B1 LTR ERVL 461 515 0 441 0 0 0 chr20 62778004 62778053 -3889952 + (T)n Simple_repeat Simple_repeat 1 49 0 591 268 41 61 chr20 62778166 62778412 -3889593 + MIR SINE MIR 22 262 0 1862 146 164 11 chr20 62778498 62778869 -3889136 - MSTA LTR MaLR 0 428 1 238 287 21 21 chr20 62780747 62780841 -3887164 + MER53 DNA DNA 2 95 -94 552 305 91 38 chr20 62781201 62781693 -3886312 - L1ME3A LINE L1 -230 5940 5410 1952 123 7 13 chr20 62782055 62782357 -3885648 - AluSx SINE Alu -12 300 1 311 272 219 40 chr20 62782372 62782596 -3885409 - L1MEd LINE L1 -5732 387 124 3378 225 53 14 chr20 62782695 62784162 -3883843 + L1MD2 LINE L1 4639 6162 -197 258 109 87 0 chr20 62784164 62784210 -3883795 - MER4-int LTR ERV1 -5436 1162 1113 504 267 0 0 chr20 62784211 62784455 -3883550 + (CA)n Simple_repeat Simple_repeat 1 244 0 826 165 188 0 chr20 62784467 62784637 -3883368 + L1MD2 LINE L1 6144 6345 -14 2007 121 3 0 chr20 62784994 62785284 -3882721 + AluSx SINE Alu 1 291 -21 251 205 169 0 chr20 62786110 62786193 -3881812 - MIR SINE MIR -75 187 91 731 83 0 9 chr20 62787038 62787147 -3880858 + (TTTC)n Simple_repeat Simple_repeat 1 108 0 186 228 167 53 chr20 62787620 62787734 -3880271 - MER5A DNA MER1_type -36 153 27 395 347 56 19 chr20 62787989 62788205 -3879800 + MIR SINE MIR 16 239 -23 322 234 136 80 chr20 62789561 62789836 -3878169 - MLT1D LTR MaLR -91 376 69 2576 130 59 0 chr20 62789836 62790244 -3877761 - MER57B LTR ERV1 0 434 3 322 234 136 80 chr20 62790244 62790318 -3877687 - MLT1D LTR MaLR -398 69 1 242 320 29 19 chr20 62790326 62790429 -3877576 + MIR SINE MIR 103 206 -56 287 254 216 15 chr20 62790436 62790570 -3877435 + MER5A DNA MER1_type 29 189 0 342 0 0 0 chr20 62790756 62790794 -3877211 + (T)n Simple_repeat Simple_repeat 1 38 0 3246 108 17 4 chr20 62790842 62791315 -3876690 - L1PA10 LINE L1 0 6168 5690 809 67 0 59 chr20 62791315 62791446 -3876559 + L1PA10 LINE L1 5578 5687 -481 23 54 0 0 chr20 62791496 62791533 -3876472 + AT_rich Low_complexity Low_complexity 1 37 0 224 119 0 24 chr20 62792487 62792529 -3875476 + (TC)n Simple_repeat Simple_repeat 1 41 0 1035 178 8 2 chr20 62793728 62793966 -3874039 + CT-rich Low_complexity Low_complexity 1 236 -296 2011 141 86 9 chr20 62793966 62794314 -3873691 - THE1C LTR MaLR 0 375 1 1035 178 8 2 chr20 62794314 62794426 -3873579 + CT-rich Low_complexity Low_complexity 236 532 0 288 209 38 29 chr20 62794484 62794589 -3873416 + CT-rich Low_complexity Low_complexity 2 107 0 503 283 101 0 chr20 62794771 62795047 -3872958 - MER90 LTR ERV1 -17 558 255 284 328 53 38 chr20 62797656 62797794 -3870211 + MER5A DNA MER1_type 3 152 -37 8969 245 56 21 chr20 62798013 62801079 -3866926 - L1MCb LINE L1 -1124 5440 2017 2129 109 0 11 chr20 62801079 62801403 -3866602 + AluSg SINE Alu 1 321 0 8969 245 56 21 chr20 62801403 62803491 -3864514 - L1MCb LINE L1 -4547 2017 4 296 359 10 0 chr20 62803567 62803670 -3864335 - MIR SINE MIR -113 149 46 652 249 35 12 chr20 62803685 62803858 -3864147 - MER45A DNA AcHobo 0 178 2 2494 90 0 0 chr20 62804188 62804489 -3863516 - AluSq SINE Alu -12 301 1 270 277 53 43 chr20 62804705 62804799 -3863206 - MER5B DNA MER1_type -82 96 2 343 266 18 37 chr20 62805157 62805266 -3862739 - MIR SINE MIR -110 152 46 231 61 0 0 chr20 62806740 62806773 -3861232 + (CA)n Simple_repeat Simple_repeat 2 34 0 2319 144 21 0 chr20 62806857 62807238 -3860767 + MLT1B LTR MaLR 2 390 0 266 290 14 0 chr20 62807364 62807433 -3860572 - L2 LINE L2 -1 3312 3243 439 257 42 28 chr20 62809324 62809564 -3858441 - MLT1E1 LTR MaLR -396 230 4 837 143 37 0 chr20 62809777 62810337 -3857668 + (TCCA)n Simple_repeat Simple_repeat 1 580 0 292 325 151 8 chr20 62810343 62810469 -3857536 - L2 LINE L2 -5 3267 3124 969 203 59 0 chr20 62810482 62810684 -3857321 - MER20 DNA MER1_type -5 214 1 203 359 31 16 chr20 62812006 62812134 -3855871 + MIR SINE MIR 87 216 -46 502 289 36 49 chr20 62812203 62812428 -3855577 + MLT1K LTR MaLR 26 247 -341 259 286 181 0 chr20 62813456 62813561 -3854444 + L2 LINE L2 3190 3313 0 553 272 129 9 chr20 62813641 62813865 -3854140 - MLT1J LTR MaLR -161 350 100 1922 153 0 41 chr20 62813912 62814226 -3853779 + AluSx SINE Alu 1 301 -11 360 357 154 28 chr20 62814851 62815397 -3852608 + L3 LINE CR1 614 1228 -349 396 0 0 0 chr20 62819764 62819808 -3848197 + (TGGA)n Simple_repeat Simple_repeat 2 45 0 590 231 36 89 chr20 62821050 62821275 -3846730 + MER20 DNA MER1_type 7 219 0 236 148 0 49 chr20 62821780 62821841 -3846164 + (CAGCC)n Simple_repeat Simple_repeat 3 60 0 25 0 0 0 chr20 62823190 62823215 -3844790 + AT_rich Low_complexity Low_complexity 1 25 0 1161 218 13 23 chr20 62823653 62823956 -3844049 - MER33 DNA MER1_type -23 301 2 2432 84 0 3 chr20 62824562 62824861 -3843144 - AluSc SINE Alu -11 298 1 193 336 75 60 chr20 62825196 62825330 -3842675 + L2 LINE L2 3076 3211 -61 255 213 13 53 chr20 62826016 62826091 -3841914 + MLT1L LTR MaLR 41 112 -503 352 301 82 29 chr20 62826222 62826428 -3841577 + MLT1L LTR MaLR 291 507 -108 1825 286 65 35 chr20 62827144 62827546 -3840459 - L1ME1 LINE L1 -18 6148 5760 1976 170 51 58 chr20 62827546 62827998 -3840007 - LTR47A LTR ERVL 0 452 4 1825 286 65 35 chr20 62827998 62828233 -3839772 - L1ME1 LINE L1 -406 5760 5534 192 77 0 0 chr20 62828233 62828259 -3839746 + (TA)n Simple_repeat Simple_repeat 2 27 0 2135 125 7 3 chr20 62828259 62828563 -3839442 - AluY SINE Alu -6 305 1 1825 286 65 35 chr20 62828563 62828621 -3839384 - L1ME1 LINE L1 -632 5534 5479 4372 93 5 19 chr20 62828621 62829247 -3838758 - L1PB2 LINE L1 0 6151 5535 1825 286 65 35 chr20 62829247 62829345 -3838660 - L1ME1 LINE L1 -687 5479 5328 388 133 17 0 chr20 62830407 62830467 -3837538 - MLT1D LTR MaLR -444 61 1 1115 238 143 3 chr20 62833375 62833766 -3834239 - MLT1D LTR MaLR -55 450 5 270 332 58 10 chr20 62834468 62834676 -3833329 - MLT1K LTR MaLR -302 286 69 2367 108 0 3 chr20 62834776 62835081 -3832924 + AluSx SINE Alu 2 305 -7 399 263 23 61 chr20 62836657 62836680 -3831325 + MIR SINE MIR 93 115 -147 2354 135 11 8 chr20 62836680 62837042 -3830963 + THE1B LTR MaLR 2 364 0 399 263 23 61 chr20 62837042 62837181 -3830824 + MIR SINE MIR 115 248 -14 579 225 84 34 chr20 62837284 62837462 -3830543 + MER5A DNA MER1_type 3 189 0 1428 219 70 59 chr20 62837799 62838274 -3829731 - MLT1D LTR MaLR -21 484 5 453 343 22 17 chr20 62838316 62838494 -3829511 + MIR SINE MIR 1 179 -83 361 293 61 94 chr20 62839106 62839213 -3828792 - L3 LINE CR1 -150 1427 1318 204 40 0 0 chr20 62839213 62839238 -3828767 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 361 293 61 94 chr20 62839238 62839522 -3828483 - L3 LINE CR1 -259 1318 1049 1909 151 73 22 chr20 62839836 62840193 -3827812 + THE1C LTR MaLR 1 375 0 182 37 37 0 chr20 62840626 62840653 -3827352 + (GGAGAA)n Simple_repeat Simple_repeat 3 30 0 216 256 231 19 chr20 62840827 62840983 -3827022 + L2 LINE L2 2878 3066 -247 887 229 109 58 chr20 62841212 62841474 -3826531 - MLT1C LTR MaLR 0 467 173 1673 168 9 84 chr20 62841474 62841796 -3826209 - AluJo SINE Alu -10 302 5 887 229 109 58 chr20 62841796 62841965 -3826040 - MLT1C LTR MaLR -294 173 14 249 269 204 19 chr20 62842138 62842246 -3825759 - MIR SINE MIR -113 149 22 240 280 196 37 chr20 62842269 62842376 -3825629 - MIR SINE MIR -69 139 16 253 167 0 128 chr20 62842828 62842906 -3825099 + MLT1H LTR MaLR 482 549 0 322 314 33 8 chr20 62844498 62844619 -3823386 - MIR SINE MIR -118 144 21 22 35 0 0 chr20 62844994 62845023 -3822982 + AT_rich Low_complexity Low_complexity 1 29 0 464 243 168 72 chr20 62846113 62846488 -3821517 + MLT1H LTR MaLR 139 549 0 282 287 45 83 chr20 62846505 62846662 -3821343 - MIR SINE MIR -12 250 100 398 322 29 47 chr20 62847412 62847583 -3820422 + MER5B DNA MER1_type 2 169 -9 328 248 36 109 chr20 62848610 62848747 -3819258 + MIR3 SINE MIR 30 156 -52 245 256 35 128 chr20 62848754 62848926 -3819079 - MIR SINE MIR 0 262 107 1618 234 111 43 chr20 62849346 62849898 -3818107 + MLT1E LTR MaLR 5 593 0 368 209 104 30 chr20 62850589 62850723 -3817282 - MIR SINE MIR -71 191 48 1932 172 0 3 chr20 62850952 62851254 -3816751 - AluJb SINE Alu -11 301 1 2648 111 6 0 chr20 62851501 62851863 -3816142 - THE1B LTR MaLR 0 364 1 1378 224 85 4 chr20 62852075 62852347 -3815658 + AluJb SINE Alu 1 294 -18 317 239 111 0 chr20 62853687 62853804 -3814201 + L2 LINE L2 2470 2599 -715 339 234 0 0 chr20 62854007 62854071 -3813934 + L1MC4 LINE L1 6616 6679 -1363 1800 175 26 16 chr20 62854132 62854441 -3813564 - AluJo SINE Alu 0 312 1 277 182 152 0 chr20 62854448 62854514 -3813491 + ORSL DNA AcHobo 173 248 -27 456 288 198 35 chr20 62854543 62855091 -3812914 + L2 LINE L2 2623 3276 -37 593 292 121 18 chr20 62855946 62856278 -3811727 - L1ME3 LINE L1 0 6162 5797 1265 57 0 0 chr20 62856282 62856441 -3811564 - L1PA6 LINE L1 -1 6153 5995 223 333 73 21 chr20 62857776 62857872 -3810133 + L2 LINE L2 3150 3250 -22 619 328 91 10 chr20 62858150 62858162 -3809843 + L2 LINE L2 2994 3004 -309 1018 186 37 51 chr20 62858162 62858377 -3809628 - MER20 DNA MER1_type -4 215 4 619 328 91 10 chr20 62858377 62858660 -3809345 + L2 LINE L2 3004 3313 0 516 343 39 33 chr20 62858929 62859235 -3808770 + L1MEc LINE L1 171 478 -5918 941 274 80 41 chr20 62859402 62860212 -3807793 + L1MEc LINE L1 651 1472 -4924 3393 79 4 2 chr20 62860231 62860687 -3807318 - Charlie3 DNA MER1_type -12 2698 2242 2498 113 6 0 chr20 62860683 62861045 -3806960 - Charlie3 DNA MER1_type -2212 498 135 * 413 234 66 0 chr20 62861080 62861217 -3806788 + L1MEc LINE L1 2246 2391 -3824 210 71 0 0 chr20 62861490 62861518 -3806487 + (T)n Simple_repeat Simple_repeat 1 28 0 2411 160 49 2 chr20 62861884 62862291 -3805714 - MSTB LTR MaLR 0 426 1 1144 77 18 0 chr20 62862377 62862545 -3805460 + (GAAA)n Simple_repeat Simple_repeat 1 171 0 218 152 0 22 chr20 62862560 62862606 -3805399 + GA-rich Low_complexity Low_complexity 4 48 0 1044 180 82 20 chr20 62862857 62863112 -3804893 - L1MA9 LINE L1 -5 6307 6037 807 148 39 45 chr20 62863116 62863272 -3804733 - MSTB LTR MaLR -12 420 267 461 236 126 0 chr20 62863334 62863461 -3804544 - MER5A DNA MER1_type -8 181 39 270 244 26 13 chr20 62863901 62863979 -3804026 + L2 LINE L2 3229 3307 -6 280 330 0 28 chr20 62863981 62864090 -3803915 - MIR SINE MIR -136 126 21 193 211 58 89 chr20 62864415 62864508 -3803497 - MIR SINE MIR -87 121 29 482 214 27 134 chr20 62867465 62867689 -3800316 - L1MB8 LINE L1 -1 6177 5978 664 283 11 0 chr20 62867951 62868135 -3799870 + MER69 DNA AcHobo 4 189 -1037 376 332 83 19 chr20 62868157 62868362 -3799643 + MER69 DNA AcHobo 355 572 -654 430 261 36 12 chr20 62868368 62868533 -3799472 + MER69 DNA AcHobo 2025 2193 -333 208 333 8 49 chr20 62869994 62870117 -3797888 - L2 LINE L2 -10 3303 3186 1088 251 48 43 chr20 62870158 62870573 -3797432 - LTR16C LTR ERVL -4 487 71 256 224 0 0 chr20 62872278 62872327 -3795678 + L2 LINE L2 3262 3310 -3 2192 133 3 0 chr20 62872345 62872653 -3795352 + AluSx SINE Alu 1 309 -3 760 256 68 0 chr20 62872863 62873070 -3794935 + MER58A DNA MER1_type 4 224 0 265 311 83 50 chr20 62873336 62873516 -3794489 + MIR SINE MIR 39 224 -38 694 245 48 67 chr20 62873574 62873782 -3794223 + MER63A DNA MER1_type 4 207 -3 3830 187 32 59 chr20 62876737 62877623 -3790382 + MER21B LTR ERV1 1 862 -1 323 306 101 22 chr20 62877669 62878035 -3789970 + L1ME4a LINE L1 5725 6119 -2 319 254 61 26 chr20 62880083 62880197 -3787808 - MIR SINE MIR -77 185 68 374 201 239 13 chr20 62880234 62880393 -3787612 + L2 LINE L2 3116 3310 -3 374 370 19 0 chr20 62880969 62881131 -3786874 - MIR SINE MIR -3 259 95 1342 109 0 0 chr20 62881175 62881350 -3786655 + AluSq SINE Alu 138 312 -1 228 277 131 46 chr20 62881772 62881902 -3786103 + MIR SINE MIR 44 184 -78 2138 157 63 30 chr20 62882091 62882608 -3785397 + MLT2A2 LTR ERVL 1 554 0 1518 232 14 41 chr20 62882817 62883253 -3784752 + MER63B DNA MER1_type 9 432 -4 220 329 171 14 chr20 62883505 62883715 -3784290 + MIR SINE MIR 6 248 -14 5738 163 14 8 chr20 62884072 62885110 -3782895 + L1MC1 LINE L1 5273 6316 -17 701 168 46 17 chr20 62885118 62885291 -3782714 + L1MA7 LINE L1 6113 6290 -1 1801 135 29 29 chr20 62885427 62885776 -3782229 + THE1C LTR MaLR 1 349 -26 424 311 78 16 chr20 62886496 62886689 -3781316 - L2 LINE L2 -2 3311 3107 1842 191 134 2 chr20 62886909 62887350 -3780655 - MLT1D LTR MaLR -6 499 1 1990 195 53 14 chr20 62888902 62889337 -3778668 - MLT1C LTR MaLR -15 452 1 331 340 0 20 chr20 62889380 62889480 -3778525 - MIR SINE MIR -62 146 49 848 128 0 16 chr20 62891106 62891231 -3776774 + AluSq/x SINE Alu 1 123 -189 252 77 0 0 chr20 62891231 62891270 -3776735 + (TTAA)n Simple_repeat Simple_repeat 4 42 0 928 248 76 42 chr20 62892410 62892790 -3775215 + MLT1C LTR MaLR 6 406 -61 2393 78 0 0 chr20 62892790 62893122 -3774883 - AluY SINE Alu 0 332 1 928 248 76 42 chr20 62893122 62893187 -3774818 + MLT1C LTR MaLR 406 467 0 668 242 101 5 chr20 62893215 62893323 -3774682 - L1MA9 LINE L1 -38 6274 6178 402 21 0 0 chr20 62893323 62893370 -3774635 + (TG)n Simple_repeat Simple_repeat 2 48 0 668 242 101 5 chr20 62893370 62893480 -3774525 - L1MA9 LINE L1 -134 6178 6035 227 306 134 32 chr20 62896385 62896571 -3771434 - L2 LINE L2 -95 3218 3014 864 199 0 0 chr20 62896867 62897023 -3770982 - FRAM SINE Alu -22 154 1 352 235 78 97 chr20 62897028 62897154 -3770851 + L2 LINE L2 3044 3166 -147 2673 85 18 15 chr20 62897154 62897544 -3770461 - L1PB2 LINE L1 0 6151 5761 352 235 78 97 chr20 62897544 62897634 -3770371 + L2 LINE L2 3166 3256 -57 184 314 43 0 chr20 62899921 62899991 -3768014 + MIR SINE MIR 76 148 -114 503 56 14 0 chr20 62903133 62903204 -3764801 + (TC)n Simple_repeat Simple_repeat 1 72 0 313 302 171 44 chr20 62905265 62905652 -3762353 - L2 LINE L2 0 3313 2878 313 317 62 26 chr20 62905687 62905914 -3762091 - L1ME LINE L1 -463 5658 5424 728 185 73 11 chr20 62906034 62906126 -3761879 + MER53 DNA DNA 1 86 -103 2567 82 0 0 chr20 62906126 62906432 -3761573 + AluSq SINE Alu 1 306 -7 728 185 73 11 chr20 62906432 62906517 -3761488 + MER53 DNA DNA 86 189 0 5828 145 16 54 chr20 62907871 62909931 -3758074 - L1MA4 LINE L1 -11 6289 4282 745 224 93 0 chr20 62910024 62910229 -3757776 + MLT1A2 LTR MaLR 151 374 0 1374 185 15 19 chr20 62910326 62910586 -3757419 + AluJo SINE Alu 37 295 -17 316 232 0 49 chr20 62910595 62910677 -3757328 + L2 LINE L2 3195 3272 0 207 69 0 0 chr20 62911557 62911586 -3756419 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 1694 181 3 3 chr20 62911589 62911871 -3756134 - AluJo SINE Alu -30 282 1 417 86 0 0 chr20 62911950 62912008 -3755997 + (TA)n Simple_repeat Simple_repeat 1 58 0 1667 46 0 0 chr20 62912009 62912206 -3755799 - L1PA5 LINE L1 -18 6136 5940 271 298 21 11 chr20 62912411 62912505 -3755500 - L2 LINE L2 -5 3267 3173 234 336 7 71 chr20 62912894 62913034 -3754971 - L2 LINE L2 -527 2787 2657 438 313 86 39 chr20 62913142 62913375 -3754630 - MIR SINE MIR -1 261 18 274 200 53 13 chr20 62913395 62913470 -3754535 - MIR SINE MIR -94 168 91 282 56 0 0 chr20 62913654 62913690 -3754315 + (TA)n Simple_repeat Simple_repeat 2 37 0 2082 113 3 3 chr20 62913690 62913974 -3754031 - AluSx SINE Alu -27 285 2 1263 191 22 119 chr20 62915203 62915605 -3752400 - MLT1A1 LTR MaLR 0 365 3 6445 209 77 34 chr20 62915607 62917247 -3750758 - MLT1A1-int LTR MaLR 0 1735 25 775 207 46 148 chr20 62917252 62917691 -3750314 - MLT1A1 LTR MaLR 0 365 3 887 244 60 5 chr20 62917924 62918141 -3749864 - MLT1D LTR MaLR -8 497 269 2502 59 0 10 chr20 62918530 62918834 -3749171 + AluY SINE Alu 1 301 -10 227 313 83 49 chr20 62920120 62920264 -3747741 - MER5A DNA MER1_type -22 167 19 339 253 78 71 chr20 62920585 62920681 -3747324 - L1ME4a LINE L1 -16 6105 6005 2176 90 14 4 chr20 62920681 62921041 -3746964 + AluSc SINE Alu 1 363 0 339 253 78 71 chr20 62921041 62921097 -3746908 - L1ME4a LINE L1 -116 6005 5951 310 264 8 64 chr20 62921186 62921247 -3746758 - LTR67 LTR ERVL -8 549 486 1550 211 143 33 chr20 62921247 62921634 -3746371 + MLT1D LTR MaLR 1 344 -161 936 41 0 0 chr20 62921634 62921755 -3746250 + (TG)n Simple_repeat Simple_repeat 2 122 0 2065 122 7 11 chr20 62921755 62922041 -3745964 - AluSx SINE Alu -27 285 1 1550 211 143 33 chr20 62922041 62922107 -3745898 + MLT1D LTR MaLR 343 505 0 310 264 8 64 chr20 62922107 62922170 -3745835 - LTR67 LTR ERVL -71 486 432 2042 141 42 33 chr20 62922469 62922830 -3745175 + THE1B LTR MaLR 1 364 0 496 216 8 8 chr20 62923035 62923160 -3744845 - L1ME4a LINE L1 -369 5752 5628 2521 90 0 3 chr20 62924079 62924389 -3743616 - AluSq SINE Alu -4 309 1 2279 104 0 0 chr20 62926131 62926418 -3741587 + AluSx SINE Alu 20 306 -6 212 316 0 0 chr20 62926784 62926841 -3741164 + (TG)n Simple_repeat Simple_repeat 2 58 0 540 251 114 29 chr20 62929449 62929624 -3738381 + MER20 DNA MER1_type 9 198 -21 470 254 67 36 chr20 62930098 62930291 -3737714 + MIR SINE MIR 43 241 -21 2173 130 7 0 chr20 62930558 62930850 -3737155 - AluSx SINE Alu -18 294 1 837 199 102 37 chr20 62933121 62933337 -3734668 - MLT2D LTR ERVL 0 414 242 271 313 0 0 chr20 62933604 62933684 -3734321 - LTR58 LTR ERV1 -250 429 350 803 194 17 91 chr20 62933906 62934047 -3733958 - MLT2B1 LTR ERVL -180 234 116 1441 165 97 8 chr20 62934047 62934344 -3733661 + AluSx SINE Alu 1 321 0 803 194 17 91 chr20 62934344 62934453 -3733552 - MLT2B1 LTR ERVL -298 116 1 331 287 17 0 chr20 62936015 62936130 -3731875 + LTR43 LTR ERV1 180 296 -306 27 0 0 0 chr20 62937319 62937346 -3730659 + AT_rich Low_complexity Low_complexity 1 27 0 267 298 44 18 chr20 62937346 62937460 -3730545 - MLT1D LTR MaLR -50 417 301 788 211 62 19 chr20 62937487 62937696 -3730309 - MLT1D LTR MaLR -256 249 32 608 161 9 0 chr20 62937855 62937967 -3730038 - L1MB3 LINE L1 -8 6175 6063 296 86 25 86 chr20 62938036 62938198 -3729807 + (CACCAT)n Simple_repeat Simple_repeat 1 152 0 216 114 152 9 chr20 62938198 62938303 -3729702 + (TCCA)n Simple_repeat Simple_repeat 1 120 0 216 127 13 89 chr20 62938306 62938463 -3729542 + (CACCAT)n Simple_repeat Simple_repeat 2 146 0 306 342 72 20 chr20 62938705 62938857 -3729148 + L2 LINE L2 3153 3312 -1 290 163 0 0 chr20 62940029 62940078 -3727927 - L1M3 LINE L1 -359 5812 5764 248 327 20 26 chr20 62940936 62941089 -3726916 + L1MC4a LINE L1 5592 5743 -2065 * 2692 171 12 73 chr20 62941067 62941292 -3726713 + L1MB4 LINE L1 5605 5842 -338 1833 131 56 0 chr20 62941292 62941728 -3726277 + AluSx SINE Alu 1 451 0 2692 171 12 73 chr20 62941728 62942102 -3725903 + L1MB4 LINE L1 5842 6168 -12 303 270 58 85 chr20 62942116 62942129 -3725876 + L1MC4a LINE L1 5728 5740 -2068 1356 249 33 25 chr20 62942129 62942491 -3725514 - MLT1A1 LTR MaLR 0 365 1 303 270 58 85 chr20 62942491 62942547 -3725458 + L1MC4a LINE L1 5740 5796 -2012 711 233 79 15 chr20 62942547 62942749 -3725256 - MER58C DNA MER1_type 0 215 1 303 270 58 85 chr20 62942749 62942867 -3725138 + L1MC4a LINE L1 5796 5911 -1897 428 329 0 0 chr20 62944920 62945057 -3722948 + (CA)n Simple_repeat Simple_repeat 1 137 0 340 290 61 33 chr20 62945125 62945339 -3722666 - L1MC4a LINE L1 -1922 5886 5667 2251 104 7 3 chr20 62945874 62946182 -3721823 + AluSc SINE Alu 1 309 0 364 289 21 68 chr20 62947995 62948185 -3719820 + Charlie8 DNA MER1_type 36 216 -2201 208 200 0 22 chr20 62949435 62949480 -3718525 + (TTA)n Simple_repeat Simple_repeat 1 44 0 2285 122 0 0 chr20 62950337 62950641 -3717364 - AluSq SINE Alu -3 310 7 2684 181 27 22 chr20 62953279 62953865 -3714140 - LTR10E LTR ERV1 0 633 1 3413 287 27 26 chr20 62953932 62955095 -3712910 - LTR10E-int LTR ERV1 -169 7501 5338 2489 183 45 12 chr20 62955348 62955857 -3712148 - LTR10E-int LTR ERV1 -3804 3092 2567 257 324 39 0 chr20 62956300 62956402 -3711603 - LTR10E-int LTR ERV1 -2939 4846 4741 3628 105 35 19 chr20 62956409 62957056 -3710949 - LTR10E-int LTR ERV1 -4337 2559 1902 322 172 133 56 chr20 62956944 62957124 -3710881 - HERVKC4 LTR ERVK -2459 2803 2610 * 314 143 0 12 chr20 62957478 62957562 -3710443 - LTR10E-int LTR ERV1 -5974 922 840 263 182 0 0 chr20 62957666 62957721 -3710284 - LTR10E-int LTR ERV1 -5433 1165 1111 305 158 18 0 chr20 62957725 62957782 -3710223 - L1MCa LINE L1 -4363 2063 2006 220 172 16 31 chr20 62957885 62957949 -3710056 + (CACCC)n Simple_repeat Simple_repeat 2 64 0 188 33 0 33 chr20 62957953 62957983 -3710022 + (CCCCCA)n Simple_repeat Simple_repeat 2 30 0 850 248 40 25 chr20 62958099 62958377 -3709628 - LTR10E-int LTR ERV1 -6360 289 8 2826 151 9 17 chr20 62958379 62958844 -3709161 - LTR10E LTR ERV1 0 633 173 515 129 32 0 chr20 62958870 62958963 -3709042 - LTR10E LTR ERV1 -537 96 1 748 224 0 24 chr20 62959647 62959812 -3708193 + MER63 DNA MER1_type 1 787 -275 228 193 35 35 chr20 62961560 62961617 -3706388 + L1ME LINE L1 5492 5548 -573 346 242 146 34 chr20 62961669 62961847 -3706158 + L1ME LINE L1 5562 5759 -362 442 214 71 18 chr20 62961940 62961954 -3706051 - L1MA10 LINE L1 -2 6332 6319 1627 268 87 19 chr20 62961954 62962541 -3705464 - L1ME1 LINE L1 -5 6161 5535 439 143 41 0 chr20 62962598 62962696 -3705309 - L1MA8 LINE L1 -1 6290 6189 25 31 0 0 chr20 62962947 62962979 -3705026 + AT_rich Low_complexity Low_complexity 1 32 0 288 266 165 0 chr20 62963578 62963687 -3704318 + MIR SINE MIR 115 241 -21 233 284 0 63 chr20 62963791 62963886 -3704119 - L2 LINE L2 -1 3271 3183 407 263 116 62 chr20 62964937 62965261 -3702744 + L1MCb LINE L1 51 715 -5785 2539 283 57 2 chr20 62965304 62966515 -3701490 + L1MCb LINE L1 2640 3885 -3056 241 314 7 7 chr20 62967550 62967687 -3700318 + (CA)n Simple_repeat Simple_repeat 1 137 0 291 225 56 0 chr20 62967892 62967981 -3700024 + L2 LINE L2 3168 3261 -11 21 0 0 0 chr20 62970868 62970889 -3697116 + GC_rich Low_complexity Low_complexity 1 21 0 282 286 20 10 chr20 62971399 62971497 -3696508 + L2 LINE L2 3139 3237 -35 2002 169 90 12 chr20 62971592 62972005 -3696000 - MER66A LTR ERV1 -7 471 27 458 298 44 20 chr20 62972265 62972513 -3695492 + L1MC4 LINE L1 6773 7026 -1016 229 242 176 33 chr20 62973102 62973193 -3694812 + MIR SINE MIR 118 221 -41 466 221 62 38 chr20 62973528 62973737 -3694268 - MLT1H LTR MaLR 0 549 271 2191 126 0 3 chr20 62973775 62974069 -3693936 - AluSx SINE Alu -19 293 1 449 254 97 0 chr20 62974070 62974224 -3693781 - MLT1H LTR MaLR -407 142 1 221 391 9 0 chr20 62974488 62974598 -3693407 - MIR3 SINE MIR -47 161 51 186 103 0 0 chr20 62974803 62974832 -3693173 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 242 304 112 12 chr20 62975335 62975496 -3692509 + MLT1K LTR MaLR 381 557 -31 277 323 23 31 chr20 62977461 62977591 -3690414 + MER5B DNA MER1_type 38 166 -12 361 294 81 0 chr20 62977652 62977812 -3690193 - MER113 DNA MER1_type? -122 399 227 2102 114 24 3 chr20 62977815 62978105 -3689900 + AluSx SINE Alu 1 296 -16 280 252 61 46 chr20 62978126 62978257 -3689748 - HAL1 LINE L1 -989 1518 1386 1588 275 88 55 chr20 62978274 62979463 -3688542 - L1MEd LINE L1 -4864 1255 76 279 0 0 0 chr20 62979463 62979494 -3688511 + (TG)n Simple_repeat Simple_repeat 2 32 0 1588 275 88 55 chr20 62979494 62979562 -3688443 - L1MEd LINE L1 -6043 76 12 2352 262 47 61 chr20 62979952 62981099 -3686906 - L1MC4 LINE L1 -137 7905 6775 368 256 157 87 chr20 62981765 62982077 -3685928 + MLT1J LTR MaLR 137 470 -41 379 217 33 0 chr20 62984307 62984399 -3683606 + MER53 DNA DNA 1 95 -94 2238 113 0 0 chr20 62984411 62984704 -3683301 - AluSx SINE Alu -19 293 1 355 252 27 9 chr20 62984704 62984815 -3683190 - MER53 DNA DNA -53 136 24 342 244 42 17 chr20 62984708 62984827 -3683178 + MER53 DNA DNA 68 189 0 * 308 290 103 0 chr20 62985279 62985386 -3682619 - L2 LINE L2 -8 3305 3188 1603 230 36 53 chr20 62986694 62987199 -3680806 + MLT1D LTR MaLR 10 505 0 560 77 26 0 chr20 62987719 62987797 -3680208 + MADE1 DNA Mariner 1 80 0 785 236 26 5 chr20 62988218 62988413 -3679592 + MER3 DNA MER1_type 11 209 0 371 298 28 34 chr20 62989881 62990059 -3677946 + MER5B DNA MER1_type 1 177 -1 2699 103 2 29 chr20 62990478 62990887 -3677118 + L1PB1 LINE L1 5747 6144 -7 1330 212 62 28 chr20 62991069 62991427 -3676578 - L1MB5 LINE L1 -36 6138 5769 556 203 144 11 chr20 62992794 62993105 -3674900 + MLT1D LTR MaLR 1 505 0 181 387 143 0 chr20 62993162 62993281 -3674724 + MIR SINE MIR 127 262 0 630 0 0 0 chr20 62994421 62994491 -3673514 + (TA)n Simple_repeat Simple_repeat 2 71 0 2181 109 10 0 chr20 62994541 62994844 -3673161 - AluSx SINE Alu -6 306 1 1559 203 25 98 chr20 62995537 62996019 -3671986 + L1MC2 LINE L1 5328 5774 -392 232 224 60 0 chr20 62996026 62996093 -3671912 + L1ME1 LINE L1 6088 6158 -8 1077 229 71 52 chr20 62996748 62997058 -3670947 + MLT1A2 LTR MaLR 1 316 -58 397 339 0 6 chr20 62997442 62997616 -3670389 + (CAAGC)n Simple_repeat Simple_repeat 5 177 0 451 226 4 8 chr20 62998495 62998732 -3669273 + (TG)n Simple_repeat Simple_repeat 1 235 0 1154 280 39 86 chr20 63000427 63000999 -3667006 + MLT1K LTR MaLR 9 553 -35 1938 151 0 0 chr20 63001229 63001520 -3666485 - AluSx SINE Alu -18 294 4 1649 247 29 14 chr20 63002243 63002688 -3665317 - L1 LINE L1 -3023 3123 2672 1563 246 30 23 chr20 63002672 63003103 -3664902 + L1MB1 LINE L1 5675 6108 -60 * 470 172 50 20 chr20 63003349 63003448 -3664557 + L1MB1 LINE L1 6067 6168 0 243 0 0 0 chr20 63003784 63003811 -3664194 + (CA)n Simple_repeat Simple_repeat 1 27 0 225 0 0 0 chr20 63003810 63003835 -3664170 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 1490 312 88 8 chr20 63005688 63006198 -3661807 - MLT1H1 LTR MaLR -4 551 1 2991 182 0 6 chr20 63006846 63007335 -3660670 - MER66B LTR ERV1 0 486 1 1393 178 52 4 chr20 63008162 63008431 -3659574 + L1MC2 LINE L1 5745 6026 -318 1151 196 9 0 chr20 63008433 63008652 -3659353 - AluJo SINE Alu -7 305 85 1130 207 95 20 chr20 63008653 63008948 -3659057 + L1MC2 LINE L1 6026 6342 -2 299 294 52 22 chr20 63009307 63009443 -3658562 + L2 LINE L2 3125 3264 -8 202 260 100 50 chr20 63011402 63011502 -3656503 - L2 LINE L2 -18 3295 3191 237 302 166 7 chr20 63011576 63011715 -3656290 - L2 LINE L2 -288 3025 2865 218 264 92 23 chr20 63012786 63012873 -3655132 + MIR SINE MIR 58 150 -58 261 311 128 22 chr20 63013361 63013541 -3654464 + MIR SINE MIR 37 235 -27 227 368 0 0 chr20 63014359 63014446 -3653559 - MER5A DNA MER1_type -63 126 40 422 357 18 6 chr20 63014481 63014649 -3653356 - MER5A DNA MER1_type -2 187 18 511 194 0 0 chr20 63014690 63014783 -3653222 - MER5A DNA MER1_type -88 101 9 194 393 0 9 chr20 63015100 63015207 -3652798 + MIR SINE MIR 156 261 -1 26 0 0 0 chr20 63016929 63016955 -3651050 + GC_rich Low_complexity Low_complexity 1 26 0 36 23 0 0 chr20 63016993 63017036 -3650969 + GC_rich Low_complexity Low_complexity 1 43 0 348 138 0 0 chr20 63017206 63017271 -3650734 + (CGG)n Simple_repeat Simple_repeat 3 67 0 28 29 0 0 chr20 63018057 63018092 -3649913 + GC_rich Low_complexity Low_complexity 1 35 0 22 99 0 0 chr20 63018169 63018240 -3649765 + GC_rich Low_complexity Low_complexity 1 71 0 2464 58 0 3 chr20 63022851 63023162 -3644843 + AluY SINE Alu 1 310 -1 248 273 83 61 chr20 63023372 63023636 -3644369 - MLT1J LTR MaLR 0 511 242 221 308 46 0 chr20 63023910 63023975 -3644030 + L2 LINE L2 3205 3272 0 300 270 156 86 chr20 63024543 63024902 -3643103 + MLT1J LTR MaLR 106 489 -22 218 206 0 103 chr20 63025062 63025130 -3642875 + L2 LINE L2 3211 3271 -1 269 326 31 23 chr20 63026269 63026398 -3641607 - MIR SINE MIR -44 218 89 719 168 17 6 chr20 63027542 63027715 -3640290 + CT-rich Low_complexity Low_complexity 4 178 0 189 0 0 0 chr20 63027768 63027789 -3640216 + (GA)n Simple_repeat Simple_repeat 1 21 0 1966 208 44 44 chr20 63028440 63028945 -3639060 - MLT1D LTR MaLR 0 505 1 250 250 0 0 chr20 63030518 63030570 -3637435 - MIR SINE MIR -115 147 96 192 262 49 16 chr20 63031454 63031515 -3636490 + MIR3 SINE MIR 92 154 -54 1145 264 59 42 chr20 63031637 63032043 -3635962 + MLT1C LTR MaLR 55 467 0 2153 168 85 5 chr20 63033318 63033718 -3634287 + MSTB1 LTR MaLR 1 432 0 183 102 17 51 chr20 63034382 63034441 -3633564 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 189 291 70 35 chr20 63041796 63041968 -3626037 + L2 LINE L2 2800 2977 -337 1714 225 6 8 chr20 63046000 63046364 -3621641 + MLT1A1 LTR MaLR 2 364 -1 2176 117 0 0 chr20 63046880 63047179 -3620826 + AluSx SINE Alu 1 299 -13 297 75 0 0 chr20 63047340 63047380 -3620625 + (TG)n Simple_repeat Simple_repeat 2 41 0 207 351 7 27 chr20 63047421 63047569 -3620436 + (TG)n Simple_repeat Simple_repeat 1 145 0 360 255 22 49 chr20 63047621 63047805 -3620200 + (TG)n Simple_repeat Simple_repeat 2 180 0 * 503 220 14 54 chr20 63047758 63048131 -3619874 + (CGTG)n Simple_repeat Simple_repeat 1 358 0 250 178 26 46 chr20 63048137 63048289 -3619716 + (TG)n Simple_repeat Simple_repeat 1 149 0 193 97 32 48 chr20 63048381 63048443 -3619562 + (TG)n Simple_repeat Simple_repeat 1 61 0 358 346 44 34 chr20 63048456 63048661 -3619344 - L1ME LINE L1 -379 5742 5536 2096 80 7 33 chr20 63048828 63049127 -3618878 + AluY SINE Alu 1 291 -20 807 201 75 5 chr20 63049595 63049794 -3618211 - MER58A DNA MER1_type -11 213 1 249 57 0 0 chr20 63049877 63049912 -3618093 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 335 349 40 7 chr20 63049966 63050118 -3617887 - MIR SINE MIR -74 188 32 198 0 0 0 chr20 63051625 63051647 -3616358 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1260 173 5 0 chr20 63052081 63052295 -3615710 + AluJo SINE Alu 85 299 -13 262 368 103 0 chr20 63054067 63054184 -3613821 - MIR SINE MIR -59 149 21 328 335 67 28 chr20 63055467 63055646 -3612359 + MLT1J2 LTR MaLR 263 448 -2 546 221 46 30 chr20 63055650 63055781 -3612224 - MLT1K LTR MaLR -77 511 379 434 240 120 8 chr20 63055995 63056120 -3611885 + MLT1D LTR MaLR 1 139 -366 394 258 106 0 chr20 63056253 63056385 -3611620 + MIR SINE MIR 78 223 -39 2282 120 0 0 chr20 63056544 63056869 -3611136 - L1PA14 LINE L1 0 6161 5837 1634 101 4 0 chr20 63056869 63057106 -3610899 + L1PA14 LINE L1 5575 5812 -349 191 288 51 0 chr20 63057106 63057165 -3610840 + MIR SINE MIR 123 184 -78 620 259 46 10 chr20 63057256 63057453 -3610552 + MER20 DNA MER1_type 2 205 -14 243 0 0 0 chr20 63057582 63057609 -3610396 + (TTTTTG)n Simple_repeat Simple_repeat 6 32 0 238 210 170 10 chr20 63058280 63058380 -3609625 - L2 LINE L2 -2 3311 3196 645 131 0 0 chr20 63061038 63061145 -3606860 + (TG)n Simple_repeat Simple_repeat 1 107 0 2176 99 0 10 chr20 63061907 63062211 -3605794 + AluSq SINE Alu 1 301 -12 243 273 15 0 chr20 63062393 63062459 -3605546 + L2 LINE L2 3240 3306 -7 1080 226 75 83 chr20 63063795 63064264 -3603741 + MLT1C LTR MaLR 3 467 0 886 227 85 7 chr20 63067504 63067950 -3600055 + MLT1D LTR MaLR 3 505 0 204 323 97 11 chr20 63067953 63068046 -3599959 + MIR SINE MIR 84 184 -78 210 241 17 0 chr20 63068276 63068334 -3599671 + CT-rich Low_complexity Low_complexity 3 61 0 190 93 23 23 chr20 63069285 63069328 -3598677 + (TG)n Simple_repeat Simple_repeat 2 44 0 442 188 40 40 chr20 63069522 63069698 -3598307 + (TG)n Simple_repeat Simple_repeat 1 176 0 357 129 51 45 chr20 63069736 63069914 -3598091 + (TG)n Simple_repeat Simple_repeat 1 179 0 343 239 246 0 chr20 63070158 63070288 -3597717 - MER5A DNA MER1_type -16 173 12 2147 104 7 3 chr20 63071129 63071437 -3596568 - AluSg1 SINE Alu 0 309 1 232 325 103 0 chr20 63071851 63071968 -3596037 - LTR43 LTR ERV1 -124 478 350 400 242 11 0 chr20 63072252 63072343 -3595662 - LTR43 LTR ERV1 -324 278 187 697 192 27 27 chr20 63073808 63073954 -3594051 - MER45A DNA AcHobo 0 178 33 1803 204 14 34 chr20 63075073 63075128 -3592877 - MLT1B LTR MaLR 0 396 341 1950 156 9 24 chr20 63075128 63075467 -3592538 - MER1B DNA MER1_type 0 337 4 1803 204 14 34 chr20 63075467 63075807 -3592198 - MLT1B LTR MaLR -55 341 2 26 30 0 0 chr20 63076123 63076156 -3591849 + AT_rich Low_complexity Low_complexity 1 33 0 537 193 32 25 chr20 63076750 63077067 -3590938 + (TG)n Simple_repeat Simple_repeat 1 319 0 339 162 44 22 chr20 63077100 63077236 -3590769 + (TG)n Simple_repeat Simple_repeat 1 139 0 4903 189 23 25 chr20 63078460 63078527 -3589478 - L1MA9 LINE L1 -3 6309 6243 1946 145 6 10 chr20 63078527 63078838 -3589167 - AluJo SINE Alu -2 310 1 4903 189 23 25 chr20 63078838 63079829 -3588176 - L1MA9 LINE L1 -69 6243 5254 321 136 30 0 chr20 63080447 63080513 -3587492 - L1MA8 LINE L1 -10 6281 6214 1453 158 0 32 chr20 63080515 63080762 -3587243 - AluJo SINE Alu -20 292 54 207 164 73 0 chr20 63081811 63081866 -3586139 + T-rich Low_complexity Low_complexity 4 62 0 1239 107 0 0 chr20 63081900 63082069 -3585936 + AluY SINE Alu 1 169 -142 571 91 0 0 chr20 63082069 63082146 -3585859 - AluY SINE Alu -67 244 168 652 221 47 0 chr20 63082380 63082529 -3585476 - MER20 DNA MER1_type -34 185 30 313 248 20 10 chr20 63083985 63084086 -3583919 - MIR SINE MIR -59 203 102 841 127 25 44 chr20 63084223 63084381 -3583624 - L1M3 LINE L1 -403 5765 5611 815 146 60 80 chr20 63084380 63084467 -3583538 + L1MB1 LINE L1 5971 6058 -110 * 1751 151 0 30 chr20 63084467 63084772 -3583233 + AluSx SINE Alu 1 296 -16 815 146 60 80 chr20 63084772 63084883 -3583122 + L1MB1 LINE L1 6058 6165 -3 274 297 145 68 chr20 63085086 63085321 -3582684 - L2 LINE L2 0 3272 3057 714 267 63 0 chr20 63085321 63085527 -3582478 + MER20 DNA MER1_type 1 219 0 274 297 145 68 chr20 63085527 63085705 -3582300 - L2 LINE L2 -215 3057 2827 391 269 16 75 chr20 63086726 63086912 -3581093 - MIR SINE MIR -60 202 28 1036 244 123 28 chr20 63089094 63089516 -3578489 - MLT1C LTR MaLR 0 467 6 212 376 97 6 chr20 63089795 63089960 -3578045 + MIR SINE MIR 59 238 -24 188 83 0 56 chr20 63293772 63293808 -3374197 + (CAGAGA)n Simple_repeat Simple_repeat 3 36 0 204 302 148 5 chr20 63295438 63295559 -3372446 + MIR SINE MIR 7 140 -68 267 340 24 58 chr20 63296682 63296888 -3371117 + L2 LINE L2 3054 3252 -20 340 279 32 14 chr20 63297327 63297462 -3370543 + MIR SINE MIR 18 152 -61 810 171 16 13 chr20 63297788 63298346 -3369659 + CT-rich Low_complexity Low_complexity 1 560 0 607 221 0 11 chr20 63298373 63298554 -3369451 + CT-rich Low_complexity Low_complexity 2 180 0 379 185 0 125 chr20 63299088 63299272 -3368733 + G-rich Low_complexity Low_complexity 4 164 0 341 221 84 0 chr20 63301468 63301563 -3366442 + LTR16A1 LTR ERVL 341 443 -14 1369 237 63 5 chr20 63301757 63302170 -3365835 + MLT1C LTR MaLR 16 452 -15 217 213 0 0 chr20 63302379 63302426 -3365579 - MIR SINE MIR -113 149 103 329 303 82 0 chr20 63302668 63302790 -3365215 - Charlie5 DNA MER1_type -23 2589 2458 444 211 23 41 chr20 63303751 63303922 -3364083 + C-rich Low_complexity Low_complexity 2 169 0 234 293 24 0 chr20 63304324 63304406 -3363599 + MIR SINE MIR 39 122 -86 995 167 31 21 chr20 63304863 63305055 -3362950 + AluJo SINE Alu 3 196 -116 216 300 20 50 chr20 63305394 63305494 -3362511 - MIR SINE MIR -48 214 118 405 291 43 21 chr20 63306076 63306318 -3361687 + L1ME4a LINE L1 5180 5432 -689 2188 106 7 3 chr20 63306318 63306620 -3361385 + AluSp SINE Alu 1 303 -10 405 291 43 21 chr20 63306620 63306718 -3361287 + L1ME4a LINE L1 5432 5526 -595 470 294 67 112 chr20 63306852 63307359 -3360646 + L1ME4a LINE L1 5622 6105 -16 216 301 75 15 chr20 63307662 63307795 -3360210 + (CCCTAA)n Simple_repeat Simple_repeat 5 145 0 245 370 46 17 chr20 63307822 63307995 -3360010 + MIR SINE MIR 40 217 -45 709 211 96 50 chr20 63309639 63309919 -3358086 - LTR16A1 LTR ERVL -5 452 160 309 222 49 0 chr20 63310754 63310835 -3357170 - MLT1A1 LTR MaLR -34 433 349 324 303 98 0 chr20 63313265 63313387 -3354618 + MIR3 SINE MIR 10 143 -65 705 305 120 0 chr20 63313393 63313685 -3354320 + L1ME3 LINE L1 5452 5778 -396 2384 174 105 0 chr20 63313768 63314198 -3353807 - MER66A LTR ERV1 -3 475 1 419 315 131 2 chr20 63314198 63314429 -3353576 + L1ME3 LINE L1 5909 6164 -6 1151 291 76 0 chr20 63314545 63314992 -3353013 + L1MB5 LINE L1 5686 6166 -8 1909 156 0 13 chr20 63317037 63317344 -3350661 + AluJo SINE Alu 1 303 -9 287 181 0 24 chr20 63317924 63318007 -3349998 - MER96B DNA MER1_type? -236 181 101 2195 120 0 0 chr20 63318009 63318308 -3349697 + AluSq SINE Alu 1 299 -14 1272 243 63 0 chr20 63318308 63318766 -3349239 + L1MB7 LINE L1 5598 6133 -51 615 307 62 4 chr20 63318975 63319249 -3348756 + L1PB4 LINE L1 5865 6154 -2 771 222 17 0 chr20 63320586 63320766 -3347239 - MER66B LTR ERV1 -5 481 299 1064 226 29 14 chr20 63320779 63321058 -3346947 - MLT1A1 LTR MaLR -82 283 1 303 230 15 22 chr20 63321077 63321212 -3346793 + (CA)n Simple_repeat Simple_repeat 1 134 0 205 284 0 15 chr20 63321614 63321681 -3346324 + G-rich Low_complexity Low_complexity 5 70 0 294 234 33 23 chr20 63322044 63322147 -3345858 - MIR SINE MIR -27 181 76 190 280 242 0 chr20 63323499 63323631 -3344374 + MIR SINE MIR 7 170 -92 746 309 7 0 chr20 63323867 63324228 -3343777 + (CTG)n Simple_repeat Simple_repeat 1 363 0 304 204 84 43 chr20 63325015 63325131 -3342874 - MIR SINE MIR -72 136 16 241 233 107 29 chr20 63325625 63325728 -3342277 + MIR SINE MIR 35 145 -117 246 270 70 35 chr20 63326754 63326869 -3341136 + MIR SINE MIR 18 136 -72 393 245 0 0 chr20 63327410 63327549 -3340456 + C-rich Low_complexity Low_complexity 3 141 0 416 276 0 29 chr20 63328165 63328335 -3339670 + (CA)n Simple_repeat Simple_repeat 1 165 0 371 288 11 33 chr20 63328348 63328532 -3339473 + (CA)n Simple_repeat Simple_repeat 1 180 0 246 219 0 26 chr20 63328587 63328701 -3339304 + (CA)n Simple_repeat Simple_repeat 1 111 0 368 290 0 40 chr20 63328714 63328890 -3339115 + (CA)n Simple_repeat Simple_repeat 1 169 0 502 254 24 9 chr20 63329400 63329747 -3338258 + (TG)n Simple_repeat Simple_repeat 1 352 0 348 282 11 60 chr20 63331721 63331885 -3336120 - MIR SINE MIR -58 150 33 308 254 0 0 chr20 63332953 63333024 -3334981 + MER103 DNA DNA 14 84 -82 205 294 0 0 chr20 63333701 63333769 -3334236 - L2 LINE L2 -3 3269 3202 280 276 44 22 chr20 63335343 63335497 -3332508 + MIR SINE MIR 23 145 -63 343 269 30 4 chr20 63336993 63337116 -3330889 + MIR SINE MIR 22 144 -66 190 278 96 26 chr20 63337648 63337757 -3330248 + MIR3 SINE MIR 46 164 -44 356 351 43 13 chr20 63338521 63338679 -3329326 - MIR SINE MIR -67 141 13 504 231 62 8 chr20 63340151 63340281 -3327724 + MER5A DNA MER1_type 51 187 -2 192 246 74 66 chr20 63341775 63341897 -3326108 + L2 LINE L2 3122 3244 -28 30 69 0 0 chr20 63342754 63342812 -3325193 + GC_rich Low_complexity Low_complexity 1 58 0 59 84 0 0 chr20 63342823 63342966 -3325039 + GC_rich Low_complexity Low_complexity 1 143 0 29 98 0 0 chr20 63343030 63343122 -3324883 + GC_rich Low_complexity Low_complexity 1 92 0 424 271 42 0 chr20 63345673 63345791 -3322214 + MIR SINE MIR 8 130 -132 1473 155 58 0 chr20 63345906 63346183 -3321822 - AluJb SINE Alu -19 293 1 619 220 124 98 chr20 63346476 63346895 -3321110 - MLT1C LTR MaLR -37 430 1 483 324 50 22 chr20 63349004 63349183 -3318822 + MIR SINE MIR 33 216 -46 480 156 21 0 chr20 63350117 63350213 -3317792 + MER47A DNA MER2_type 81 178 -188 2184 107 0 0 chr20 63350214 63350504 -3317501 + AluSx SINE Alu 11 300 -12 2244 86 0 7 chr20 63350551 63350855 -3317150 + AluY SINE Alu 1 302 -9 1911 124 3 14 chr20 63350858 63351148 -3316857 + AluSx SINE Alu 11 297 -15 184 281 94 42 chr20 63351148 63351244 -3316761 + MIR SINE MIR 19 119 -143 1086 150 2 0 chr20 63351724 63352219 -3315786 + (CCA)n Simple_repeat Simple_repeat 1 496 0 324 228 40 40 chr20 63352426 63352527 -3315478 + MIR SINE MIR 21 121 -141 223 319 110 21 chr20 63352848 63353039 -3314966 - L2 LINE L2 -250 3063 2856 186 103 0 0 chr20 63353221 63353250 -3314755 + (CTGTG)n Simple_repeat Simple_repeat 5 33 0 251 336 55 16 chr20 63357955 63358083 -3309922 + L2 LINE L2 2678 2810 -504 232 158 61 37 chr20 63362856 63362938 -3305067 + (CCCCAG)n Simple_repeat Simple_repeat 4 87 0 269 289 55 16 chr20 63363659 63363811 -3304194 + L1ME LINE L1 5542 5700 -421 2189 76 10 7 chr20 63363985 63364276 -3303729 + AluY SINE Alu 1 292 -19 2130 95 37 26 chr20 63364287 63364666 -3303339 - L1MA3 LINE L1 -2 6303 5921 1196 138 0 0 chr20 63364697 63364871 -3303134 - AluSg/x SINE Alu -4 308 135 505 102 11 0 chr20 63364871 63364959 -3303046 - L1MA3 LINE L1 -619 5685 5597 2197 82 0 0 chr20 63364959 63365274 -3302731 - AluSg SINE Alu 0 315 1 740 157 14 0 chr20 63365274 63365421 -3302584 + L1M4 LINE L1 3550 3698 -2448 329 118 21 75 chr20 63365395 63365423 -3302582 + L1M4 LINE L1 5176 5204 -942 * 1444 190 39 16 chr20 63365423 63365728 -3302277 + AluJb SINE Alu 1 312 0 329 118 21 75 chr20 63365728 63365792 -3302213 + L1M4 LINE L1 5204 5263 -883 2294 104 0 0 chr20 63365792 63366101 -3301904 + AluSx SINE Alu 1 309 -3 447 246 42 0 chr20 63366101 63366219 -3301786 + L1ME1 LINE L1 5663 5785 -381 335 257 71 44 chr20 63366223 63366406 -3301599 + L1ME1 LINE L1 5890 6077 -89 302 227 13 78 chr20 63366410 63366498 -3301507 + L1MA10 LINE L1 6176 6251 -83 2365 68 0 3 chr20 63366498 63366790 -3301215 + AluY SINE Alu 1 291 -20 302 227 13 78 chr20 63366790 63366855 -3301150 + L1MA10 LINE L1 6251 6319 -15 659 225 3 3 chr20 63367349 63367663 -3300342 + (CAT)n Simple_repeat Simple_repeat 1 314 0 2320 69 0 0 chr20 63369067 63369355 -3298650 - AluY SINE Alu -17 294 7 1240 93 0 0 chr20 63369374 63369535 -3298470 - AluY SINE Alu -18 293 133 2386 51 3 29 chr20 63369535 63369846 -3298159 - AluSp SINE Alu -10 303 1 1105 60 0 0 chr20 63370185 63370319 -3297686 + AluY SINE Alu 1 134 -177 2431 65 3 0 chr20 63370319 63370628 -3297377 + AluY SINE Alu 1 310 -1 1289 224 14 0 chr20 63372135 63372425 -3295580 - MER47A DNA MER2_type 0 366 73 199 344 52 0 chr20 63372477 63372573 -3295432 - L2 LINE L2 -29 3243 3143 340 223 80 0 chr20 63372602 63372714 -3295291 + MER20 DNA MER1_type 3 123 -96 224 242 0 16 chr20 63372811 63372873 -3295132 - L2 LINE L2 -252 3061 3001 2229 93 13 0 chr20 63373378 63373678 -3294327 + AluSq SINE Alu 1 304 -9 183 42 0 0 chr20 63374289 63374313 -3293692 + (CCCCCT)n Simple_repeat Simple_repeat 5 28 0 393 344 28 0 chr20 63374948 63375160 -3292845 - L1M4 LINE L1 -376 5798 5581 412 327 136 32 chr20 63376240 63376668 -3291337 + L1MEc LINE L1 827 1370 -1206 237 225 88 38 chr20 63380023 63380103 -3287902 + MIR3 SINE MIR 73 156 -52 209 224 0 35 chr20 63380602 63380660 -3287345 + C-rich Low_complexity Low_complexity 4 59 0 185 159 23 0 chr20 63382171 63382215 -3285790 + C-rich Low_complexity Low_complexity 3 47 0 25 65 0 0 chr20 63382223 63382269 -3285736 + GC_rich Low_complexity Low_complexity 1 46 0 25 0 0 0 chr20 63382418 63382443 -3285562 + GC_rich Low_complexity Low_complexity 1 25 0 23 54 0 0 chr20 63382468 63382505 -3285500 + GC_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr20 63382579 63382607 -3285398 + GC_rich Low_complexity Low_complexity 1 28 0 199 336 22 59 chr20 63383788 63383947 -3284058 - MIR SINE MIR -61 147 35 261 308 100 8 chr20 63386232 63386362 -3281643 - MIR SINE MIR -75 187 46 235 268 212 22 chr20 63386617 63386848 -3281157 + L2 LINE L2 2830 3104 -168 206 267 33 0 chr20 63388860 63388920 -3279085 + MIR3 SINE MIR 106 167 -41 806 166 9 20 chr20 63388947 63389306 -3278699 + (CCCA)n Simple_repeat Simple_repeat 1 355 0 261 0 0 0 chr20 63395268 63395297 -3272708 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 201 100 0 0 chr20 63395405 63395435 -3272570 - L2 LINE L2 -255 3058 3029 369 232 142 0 chr20 63396669 63396824 -3271181 - MLT1K LTR MaLR -108 480 304 322 292 0 23 chr20 63397377 63397507 -3270498 + (CGGGG)n Simple_repeat Simple_repeat 1 127 0 228 229 86 19 chr20 63398001 63398106 -3269899 + MIR SINE MIR 33 144 -64 184 178 22 22 chr20 63398309 63398354 -3269651 - L3 LINE CR1 -133 1444 1400 227 366 78 7 chr20 63398708 63398850 -3269155 - L2 LINE L2 -1 3312 3161 234 214 14 29 chr20 63399722 63399792 -3268213 + (CCA)n Simple_repeat Simple_repeat 2 70 0 718 174 0 22 chr20 63399794 63399978 -3268027 + (CACCAT)n Simple_repeat Simple_repeat 1 180 0 453 309 136 16 chr20 63400051 63400331 -3267674 - L1MEd LINE L1 -4735 1575 1330 2422 72 0 7 chr20 63400331 63400637 -3267368 - AluY SINE Alu -7 304 1 453 309 136 16 chr20 63400637 63400988 -3267017 - L1MEd LINE L1 -4980 1330 1022 2271 89 3 13 chr20 63400988 63401302 -3266703 - AluY SINE Alu 0 311 1 453 309 136 16 chr20 63401302 63401564 -3266441 - L1MEd LINE L1 -5288 1022 531 240 210 74 25 chr20 63401620 63401701 -3266304 - L1MEd LINE L1 -5692 427 343 1448 147 0 26 chr20 63404004 63404215 -3263790 + AluJb SINE Alu 87 293 -19 688 0 0 0 chr20 63404215 63404296 -3263709 + L1PA2 LINE L1 6072 6152 -3 1448 147 0 26 chr20 63404296 63404315 -3263690 + AluJb SINE Alu 293 311 -1 2090 93 55 0 chr20 63404322 63404612 -3263393 + AluSq SINE Alu 1 306 -7 2071 102 37 10 chr20 63404876 63405171 -3262834 + AluSx SINE Alu 1 303 -9 370 347 0 7 chr20 63405294 63405438 -3262567 + MER104 DNA Tc2 25 167 -13 2046 142 3 0 chr20 63405459 63405761 -3262244 - AluSp SINE Alu -9 304 2 2162 110 7 0 chr20 63405832 63406131 -3261874 - AluSp SINE Alu -12 301 1 783 207 83 51 chr20 63406380 63406597 -3261408 - MER58A DNA MER1_type 0 224 1 1015 338 55 92 chr20 63406742 63406916 -3261089 - L1 LINE L1 -2462 3684 3505 2398 77 0 6 chr20 63406916 63407229 -3260776 - AluY SINE Alu 0 311 1 1015 338 55 92 chr20 63407229 63407310 -3260695 - L1 LINE L1 -2641 3505 3423 2229 85 3 3 chr20 63407310 63407604 -3260401 - AluSx SINE Alu -18 294 1 1015 338 55 92 chr20 63407604 63408029 -3259976 - L1 LINE L1 -2723 3423 2984 993 208 52 24 chr20 63408029 63408241 -3259764 + MER20 DNA MER1_type 1 218 -1 1015 338 55 92 chr20 63408241 63408529 -3259476 - L1 LINE L1 -3162 2984 2687 2025 112 0 14 chr20 63408529 63408871 -3259134 - AluSx SINE Alu 0 339 2 1015 338 55 92 chr20 63408871 63409014 -3258991 - L1 LINE L1 -3459 2687 2646 2309 94 3 0 chr20 63409014 63409323 -3258682 + AluSp SINE Alu 1 310 -3 1015 338 55 92 chr20 63409323 63409481 -3258524 - L1 LINE L1 -3500 2646 2484 2205 71 3 0 chr20 63410114 63410397 -3257608 + AluY SINE Alu 26 309 -2 2357 81 0 0 chr20 63410573 63410868 -3257137 - AluSg SINE Alu -15 295 1 310 264 23 35 chr20 63412257 63412431 -3255574 + (TG)n Simple_repeat Simple_repeat 2 173 0 214 143 0 54 chr20 63414842 63414898 -3253107 + (CCCTAG)n Simple_repeat Simple_repeat 6 58 0 201 94 0 0 chr20 63415759 63415791 -3252214 + (CACCC)n Simple_repeat Simple_repeat 5 36 0 2144 134 0 0 chr20 63417549 63417855 -3250150 - AluSx SINE Alu -6 306 1 250 215 114 13 chr20 63418293 63418442 -3249563 + (CACCG)n Simple_repeat Simple_repeat 1 164 0 234 0 0 0 chr20 63420233 63420259 -3247746 + (GGCTG)n Simple_repeat Simple_repeat 1 26 0 302 353 50 13 chr20 63423227 63423379 -3244626 - L1M4 LINE L1 -801 5345 5200 2139 117 10 0 chr20 63423379 63423686 -3244319 - AluSx SINE Alu -2 310 1 302 353 50 13 chr20 63423686 63423913 -3244092 - L1M4 LINE L1 -946 5200 4952 180 154 58 0 chr20 63424469 63424521 -3243484 + (CCTG)n Simple_repeat Simple_repeat 3 57 0 303 245 21 75 chr20 63427855 63428043 -3239962 + C-rich Low_complexity Low_complexity 3 180 0 273 222 0 91 chr20 63428101 63428277 -3239728 + (CACCC)n Simple_repeat Simple_repeat 2 161 0 314 283 23 40 chr20 63428320 63428497 -3239508 + C-rich Low_complexity Low_complexity 2 175 0 2406 81 3 0 chr20 63429279 63429588 -3238417 - AluSp SINE Alu -3 310 1 580 165 28 17 chr20 63431244 63431420 -3236585 + CT-rich Low_complexity Low_complexity 3 180 0 228 236 28 14 chr20 63431422 63431494 -3236511 + C-rich Low_complexity Low_complexity 5 77 0 193 270 18 9 chr20 63431504 63431615 -3236390 + CT-rich Low_complexity Low_complexity 1 112 0 309 395 0 6 chr20 63431623 63431785 -3236220 + C-rich Low_complexity Low_complexity 3 163 0 186 216 0 0 chr20 63433312 63433349 -3234656 + MIR SINE MIR 112 148 -114 238 223 0 92 chr20 63435683 63435813 -3232192 + (CCTCG)n Simple_repeat Simple_repeat 2 119 0 291 239 0 0 chr20 63439972 63440039 -3227966 + C-rich Low_complexity Low_complexity 1 67 0 289 308 108 0 chr20 63444143 63444273 -3223732 + MER58A DNA MER1_type 30 173 -51 322 342 81 22 chr20 63444379 63444701 -3223304 + L1MC4a LINE L1 5598 5938 -1870 268 206 18 91 chr20 63446429 63446594 -3221411 + C-rich Low_complexity Low_complexity 4 156 0 336 226 0 68 chr20 63447223 63447413 -3220592 + G-rich Low_complexity Low_complexity 2 178 0 2091 99 0 14 chr20 63447681 63447997 -3220008 + AluSx SINE Alu 4 315 0 770 195 59 14 chr20 63448446 63448667 -3219338 + Charlie1 DNA MER1_type 2524 2754 -7 1371 152 74 26 chr20 63449427 63449696 -3218309 + AluJb SINE Alu 7 288 -24 349 238 38 9 chr20 63449793 63449898 -3218107 + L1MC/D LINE L1 5323 5430 -929 2056 132 3 13 chr20 63449996 63450306 -3217699 - AluSx SINE Alu 0 312 6 22 35 0 0 chr20 63450313 63450342 -3217663 + AT_rich Low_complexity Low_complexity 1 29 0 297 271 9 19 chr20 63450473 63450580 -3217425 - MLT1A1 LTR MaLR -33 332 227 1773 137 25 14 chr20 63453073 63453357 -3214648 + AluJo SINE Alu 1 287 -25 2440 80 3 0 chr20 63454373 63454685 -3213320 + AluSp SINE Alu 1 313 0 1911 54 96 29 chr20 63456462 63456742 -3211263 + AluY SINE Alu 1 299 -12 1695 152 3 71 chr20 63458463 63458610 -3209395 + AluJb SINE Alu 1 156 -156 2258 73 3 0 chr20 63458610 63458899 -3209106 + AluSq SINE Alu 24 313 0 2313 73 0 22 chr20 63458905 63459222 -3208783 + AluY SINE Alu 1 310 -1 1695 152 3 71 chr20 63459222 63459390 -3208615 + AluJb SINE Alu 161 301 -11 342 235 66 94 chr20 63459614 63459695 -3208310 + MER5C DNA MER1_type 114 196 -128 1995 136 0 3 chr20 63459695 63460003 -3208002 - AluSx SINE Alu -5 307 1 342 235 66 94 chr20 63460003 63460134 -3207871 + MER5C DNA MER1_type 196 320 -4 970 234 18 0 chr20 63460467 63460693 -3207312 - MER44D DNA MER2_type -23 582 481 273 295 86 0 chr20 63461320 63461459 -3206546 + L2 LINE L2 2633 2783 -531 1774 161 3 7 chr20 63461867 63462165 -3205840 + AluJo SINE Alu 1 297 -15 23 54 0 0 chr20 63462311 63462348 -3205657 + AT_rich Low_complexity Low_complexity 1 37 0 22 0 0 0 chr20 63462424 63462446 -3205559 + AT_rich Low_complexity Low_complexity 1 22 0 2172 113 0 3 chr20 63463156 63463458 -3204547 - AluSx SINE Alu -11 301 1 1880 169 6 13 chr20 63464946 63465260 -3202745 + AluJo SINE Alu 1 312 0 1936 136 24 0 chr20 63466786 63467073 -3200932 - AluSx SINE Alu -18 294 1 516 311 13 2 chr20 63467913 63468107 -3199898 + L1MB8 LINE L1 5974 6176 -2 2250 87 3 19 chr20 63472346 63472658 -3195347 - AluSx SINE Alu -5 307 1 2036 112 3 26 chr20 63473408 63473712 -3194293 + AluSx SINE Alu 1 297 -15 349 196 65 11 chr20 63473782 63473874 -3194131 - HsTC2 DNA Tc2 0 1898 1802 1619 148 0 0 chr20 63473877 63474114 -3193891 + AluJb SINE Alu 1 237 -75 682 142 53 0 chr20 63474119 63474232 -3193773 + AluJb SINE Alu 188 306 -6 667 194 85 24 chr20 63474406 63474571 -3193434 - AluJo SINE Alu -13 299 125 250 317 14 14 chr20 63476604 63476714 -3191291 + (CA)n Simple_repeat Simple_repeat 2 114 -32 1573 188 17 7 chr20 63476714 63477002 -3191003 - AluJo SINE Alu -15 297 7 250 317 14 14 chr20 63477002 63477036 -3190969 + (CA)n Simple_repeat Simple_repeat 113 146 0 2061 129 0 0 chr20 63477873 63478168 -3189837 + AluSx SINE Alu 1 295 -17 475 91 0 201 chr20 63478544 63478983 -3189022 + (GGGAGA)n Simple_repeat Simple_repeat 1 350 0 435 84 0 215 chr20 63479017 63479231 -3188774 + (GGGAGA)n Simple_repeat Simple_repeat 3 170 0 222 261 6 51 chr20 63479151 63479327 -3188678 + GA-rich Low_complexity Low_complexity 2 169 0 * 411 332 86 4 chr20 63480150 63480394 -3187611 + L1MC4a LINE L1 5533 5796 -2012 1699 156 3 47 chr20 63480423 63480552 -3187453 + AluJo SINE Alu 1 134 -178 2077 104 0 10 chr20 63480552 63480841 -3187164 - AluSg SINE Alu -16 294 9 1699 156 3 47 chr20 63480841 63481032 -3186973 + AluJo SINE Alu 134 307 -5 420 351 193 42 chr20 63481081 63481428 -3186577 + L1MC4a LINE L1 5894 6187 -1621 2222 72 6 50 chr20 63481428 63481747 -3186258 + AluSg SINE Alu 1 305 -5 420 351 193 42 chr20 63481747 63482188 -3185817 + L1MC4a LINE L1 6187 6801 -1007 268 179 18 0 chr20 63482192 63482248 -3185757 + L1MC4 LINE L1 6936 6992 -1050 1593 176 35 7 chr20 63482365 63482654 -3185351 - AluJb SINE Alu -15 297 1 614 227 55 32 chr20 63482763 63482983 -3185022 + L1MC5 LINE L1 7603 7827 -134 1572 174 48 24 chr20 63483484 63483778 -3184227 - AluJo SINE Alu -1 301 1 948 242 156 15 chr20 63483939 63485022 -3182983 + L1MD3 LINE L1 6596 7985 -10 2473 59 0 3 chr20 63485534 63485841 -3182164 - AluY SINE Alu -5 306 1 1780 145 43 0 chr20 63487571 63487853 -3180152 + AluSx SINE Alu 1 294 -18 2137 106 3 7 chr20 63488288 63488589 -3179416 - AluSc SINE Alu -9 300 1 1888 152 0 7 chr20 63488617 63488919 -3179086 - AluJo SINE Alu -12 300 1 2357 80 0 0 chr20 63491610 63491909 -3176096 + AluSx SINE Alu 1 299 -13 2040 140 0 3 chr20 63493820 63494104 -3173901 + AluSx SINE Alu 1 290 -22 190 74 0 0 chr20 63494104 63494131 -3173874 + (TAAA)n Simple_repeat Simple_repeat 2 168 0 2040 140 0 3 chr20 63494131 63494154 -3173851 + AluSx SINE Alu 290 312 0 2133 89 0 48 chr20 63494213 63494526 -3173479 + AluSx SINE Alu 2 299 -13 500 246 47 20 chr20 63495364 63495527 -3172478 + MSTD LTR MaLR 4 178 -218 2046 107 0 21 chr20 63495527 63495841 -3172164 + AluSq SINE Alu 1 308 0 500 246 47 20 chr20 63495841 63495908 -3172097 + MSTD LTR MaLR 178 242 -154 723 216 46 0 chr20 63495925 63496119 -3171886 + MSTD LTR MaLR 194 396 0 480 280 65 52 chr20 63496168 63496493 -3171512 + L1MC5 LINE L1 6883 7211 -750 1960 199 92 3 chr20 63496605 63496996 -3171009 + MSTB LTR MaLR 1 426 0 484 232 55 18 chr20 63497265 63497432 -3170573 + L1MA10 LINE L1 6001 6334 0 1953 169 0 6 chr20 63497441 63497755 -3170250 + AluJb SINE Alu 1 312 0 2306 90 3 0 chr20 63497917 63498217 -3169788 + AluSp SINE Alu 1 301 -12 2330 50 3 50 chr20 63498269 63498587 -3169418 + AluY SINE Alu 3 305 -6 1446 222 3 13 chr20 63498650 63498986 -3169019 - AluJb SINE Alu 0 312 1 262 211 0 0 chr20 63499434 63499486 -3168519 - L2 LINE L2 0 3272 3221 2068 96 13 19 chr20 63499751 63500064 -3167941 + AluSx SINE Alu 1 311 -1 1555 170 7 31 chr20 63500627 63500916 -3167089 + AluJo SINE Alu 1 282 -30 279 0 0 0 chr20 63500921 63500952 -3167053 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2200 122 0 3 chr20 63501171 63501482 -3166523 + AluSx SINE Alu 3 312 0 2313 88 7 0 chr20 63501662 63501967 -3166038 + AluSg SINE Alu 1 307 -3 181 0 0 65 chr20 63502012 63502043 -3165962 + (TCC)n Simple_repeat Simple_repeat 3 31 0 262 307 102 0 chr20 63503255 63503392 -3164613 + MER3 DNA MER1_type 53 203 -6 2000 95 27 10 chr20 63504232 63504527 -3163478 + AluSx SINE Alu 1 300 -12 37 0 0 0 chr20 63505753 63505790 -3162215 + AT_rich Low_complexity Low_complexity 1 37 0 286 311 19 19 chr20 63505954 63506086 -3161919 - MER5A DNA MER1_type -41 148 6 1253 37 0 117 chr20 63508261 63508449 -3159556 + AluY SINE Alu 129 294 -17 750 284 55 5 chr20 63508991 63509209 -3158796 + MIR SINE MIR 2 230 -32 201 305 126 11 chr20 63509306 63509401 -3158604 - L2 LINE L2 0 3313 3208 2083 113 3 0 chr20 63509472 63509773 -3158232 + AluSq SINE Alu 1 302 -11 200 206 0 0 chr20 63510860 63510894 -3157111 + (CTGGGG)n Simple_repeat Simple_repeat 1 34 0 223 233 0 0 chr20 63510917 63510977 -3157028 + C-rich Low_complexity Low_complexity 6 65 0 329 244 130 73 chr20 63511728 63511851 -3156154 + MIR SINE MIR 16 145 -117 322 273 0 0 chr20 63511927 63512004 -3156001 + MLT1K LTR MaLR 192 268 -320 305 259 205 12 chr20 63512115 63512281 -3155724 + MLT1K LTR MaLR 347 544 -44 291 71 0 0 chr20 63513437 63513479 -3154526 + (ATG)n Simple_repeat Simple_repeat 1 42 0 409 273 16 33 chr20 63513494 63513615 -3154390 - MIR SINE MIR -52 210 92 294 301 0 0 chr20 63514140 63514213 -3153792 - MIR SINE MIR -110 152 80 249 249 95 77 chr20 63515476 63515645 -3152360 - MLT1J LTR MaLR -35 476 305 * 523 215 60 93 chr20 63515618 63515876 -3152129 - MLT1J LTR MaLR -146 469 136 353 307 18 0 chr20 63516984 63517098 -3150907 + MER45A DNA AcHobo 63 178 0 235 185 0 42 chr20 63518926 63519045 -3148960 + (TG)n Simple_repeat Simple_repeat 1 114 0 491 232 5 38 chr20 63519085 63519270 -3148735 + (TG)n Simple_repeat Simple_repeat 1 179 0 427 214 40 17 chr20 63519303 63519476 -3148529 + (TGAG)n Simple_repeat Simple_repeat 2 178 0 * 460 196 5 58 chr20 63519395 63519584 -3148421 + (TG)n Simple_repeat Simple_repeat 1 179 0 246 222 16 0 chr20 63519596 63519659 -3148346 + (TG)n Simple_repeat Simple_repeat 1 64 0 185 185 15 0 chr20 63519672 63519737 -3148268 + (TG)n Simple_repeat Simple_repeat 1 66 0 356 257 23 17 chr20 63519749 63519924 -3148081 + (TGAG)n Simple_repeat Simple_repeat 3 178 0 * 456 256 29 0 chr20 63519861 63520033 -3147972 + (TG)n Simple_repeat Simple_repeat 1 177 0 180 135 0 0 chr20 63520078 63520115 -3147890 + (TG)n Simple_repeat Simple_repeat 1 37 0 284 277 17 0 chr20 63520126 63520245 -3147760 + (TG)n Simple_repeat Simple_repeat 1 121 0 180 149 28 28 chr20 63520285 63520392 -3147613 + (TG)n Simple_repeat Simple_repeat 1 107 0 416 151 36 6 chr20 63520405 63520571 -3147434 + (TG)n Simple_repeat Simple_repeat 1 171 0 375 303 0 7 chr20 63520800 63520945 -3147060 + (CA)n Simple_repeat Simple_repeat 1 144 0 825 165 0 0 chr20 63522971 63523104 -3144901 - FLAM_C SINE Alu -10 133 1 358 279 132 52 chr20 63523550 63523898 -3144107 + MLT1K LTR MaLR 195 570 -18 492 285 213 16 chr20 63524479 63525148 -3142857 + L2 LINE L2 2248 3072 -241 264 281 10 0 chr20 63525162 63525258 -3142747 - LTR16B LTR ERVL -12 452 356 189 313 0 0 chr20 63527024 63527072 -3140933 - MIR SINE MIR -138 124 77 193 57 57 0 chr20 63529254 63529289 -3138716 + G-rich Low_complexity Low_complexity 123 159 0 30 59 0 0 chr20 63529297 63529348 -3138657 + GC_rich Low_complexity Low_complexity 1 51 0 22 0 0 0 chr20 63529488 63529510 -3138495 + GC_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr20 63529571 63529599 -3138406 + GC_rich Low_complexity Low_complexity 1 28 0 33 43 0 0 chr20 63529691 63529738 -3138267 + GC_rich Low_complexity Low_complexity 1 47 0 194 173 0 19 chr20 63532530 63532582 -3135423 + GA-rich Low_complexity Low_complexity 1 51 0 347 236 0 32 chr20 63535900 63536344 -3131661 + C-rich Low_complexity Low_complexity 1 429 0 262 189 8 58 chr20 63536379 63536731 -3131274 + C-rich Low_complexity Low_complexity 1 334 0 241 291 179 26 chr20 63537472 63537623 -3130382 - L2 LINE L2 -20 3252 3079 272 345 41 48 chr20 63538171 63538316 -3129689 - MIR3 SINE MIR -62 146 3 298 299 46 0 chr20 63538676 63538763 -3129242 - MIR SINE MIR -77 131 41 241 263 61 71 chr20 63539212 63539311 -3128694 + MIR SINE MIR 15 112 -150 580 330 98 21 chr20 63539848 63540327 -3127678 + MLT1K LTR MaLR 64 579 -9 293 297 55 41 chr20 63542323 63542542 -3125463 - L1MD2 LINE L1 -14 6345 6124 261 0 0 0 chr20 63542544 63542573 -3125432 + (TA)n Simple_repeat Simple_repeat 1 29 0 1825 76 121 11 chr20 63542575 63542839 -3125166 - AluSc SINE Alu -16 293 1 319 205 262 0 chr20 63542848 63542970 -3125035 - L1MB3 LINE L1 -2 6181 6028 1928 140 0 0 chr20 63543948 63544226 -3123779 + AluSx SINE Alu 1 278 -34 481 236 113 78 chr20 63544295 63544569 -3123436 + MLT1B LTR MaLR 42 332 -58 1877 134 33 10 chr20 63544569 63544874 -3123131 - AluSx SINE Alu 0 312 1 481 236 113 78 chr20 63544874 63544934 -3123071 + MLT1B LTR MaLR 332 388 -2 738 92 0 0 chr20 63545096 63545194 -3122811 + AluSg/x SINE Alu 178 275 -35 342 0 0 0 chr20 63545195 63545233 -3122772 + (TC)n Simple_repeat Simple_repeat 1 38 0 * 495 0 0 0 chr20 63545232 63545287 -3122718 + (CA)n Simple_repeat Simple_repeat 1 55 0 2280 101 3 0 chr20 63545296 63545602 -3122403 + AluSx SINE Alu 1 307 -5 939 205 75 4 chr20 63545844 63546098 -3121907 + L1MB7 LINE L1 5891 6162 -22 2392 64 0 3 chr20 63546857 63547152 -3120853 - AluY SINE Alu -15 296 3 812 139 0 8 chr20 63547156 63547300 -3120705 - AluJb SINE Alu 0 312 172 2283 83 0 32 chr20 63549620 63549932 -3118073 + AluSx SINE Alu 1 302 -10 2372 73 0 3 chr20 63549961 63550261 -3117744 - AluY SINE Alu -12 299 1 2130 124 0 0 chr20 63552212 63552510 -3115495 - AluSx SINE Alu -14 298 1 2342 85 0 19 chr20 63552559 63552878 -3115127 - AluSq SINE Alu 0 313 1 1824 168 10 0 chr20 63552925 63553234 -3114771 - AluJb SINE Alu 0 312 1 906 160 72 33 chr20 63553246 63553427 -3114578 - AluJo SINE Alu -10 302 115 180 97 0 0 chr20 63553446 63553477 -3114528 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 767 179 0 0 chr20 63553477 63553594 -3114411 - AluJo SINE Alu -185 117 1 2392 76 0 0 chr20 63554406 63554710 -3113295 - AluYa5 SINE Alu -7 304 1 40 79 0 0 chr20 63554964 63555053 -3112952 + AT_rich Low_complexity Low_complexity 1 89 0 31 0 0 0 chr20 63555498 63555529 -3112476 + AT_rich Low_complexity Low_complexity 1 31 0 1035 90 0 0 chr20 63555534 63555667 -3112338 - AluSq/x SINE Alu -179 133 1 286 333 0 0 chr20 63556800 63556881 -3111124 + MER21B LTR ERV1 9 89 -774 1716 270 95 33 chr20 63556892 63557617 -3110388 + MER21B LTR ERV1 42 811 -52 243 203 34 0 chr20 63558109 63558168 -3109837 - L1MC4 LINE L1 -1 8041 7981 338 324 29 0 chr20 63558470 63558609 -3109396 - L1MC4 LINE L1 -1441 6601 6459 301 315 19 0 chr20 63558885 63558993 -3109012 - L1MD3 LINE L1 -165 7830 7721 1143 280 82 30 chr20 63558996 63559662 -3108343 + L1MEc LINE L1 1558 2265 -4131 2385 74 3 0 chr20 63559662 63559960 -3108045 + AluSg SINE Alu 1 299 -11 1143 280 82 30 chr20 63559960 63560015 -3107990 + L1MEc LINE L1 2265 2316 -4080 1484 190 22 4 chr20 63560020 63560288 -3107717 + AluJo SINE Alu 1 273 -39 1632 161 70 7 chr20 63560299 63560584 -3107421 - AluJo SINE Alu -9 303 1 372 235 74 6 chr20 63560611 63560773 -3107232 + L1MEc LINE L1 2656 2828 -3387 430 115 23 0 chr20 63560884 63560971 -3107034 - MER2 DNA MER2_type -134 211 123 1456 164 3 66 chr20 63560972 63561259 -3106746 + AluJo SINE Alu 1 269 -43 651 219 0 0 chr20 63561314 63561478 -3106527 + L1MEc LINE L1 2872 3035 -3180 1245 51 13 0 chr20 63561478 63561634 -3106371 - AluY SINE Alu -12 299 142 2196 287 135 25 chr20 63561636 63562796 -3105209 + L1MEc LINE L1 3027 4361 -1854 2412 93 0 0 chr20 63562796 63563107 -3104898 + AluSx SINE Alu 1 311 -1 2196 287 135 25 chr20 63563107 63563312 -3104693 + L1MEc LINE L1 4361 4542 -1673 524 245 43 7 chr20 63563312 63563451 -3104554 - MIR SINE MIR -46 216 73 499 207 140 6 chr20 63563809 63563973 -3104032 - MER3 DNA MER1_type -5 204 19 1004 152 0 29 chr20 63563974 63564145 -3103860 - AluSg/x SINE Alu -21 289 124 198 167 0 0 chr20 63564146 63564182 -3103823 + (TA)n Simple_repeat Simple_repeat 2 37 0 2324 81 7 3 chr20 63564186 63564494 -3103511 - AluSg SINE Alu -1 309 1 2075 139 0 0 chr20 63564495 63564797 -3103208 - AluSq SINE Alu -11 302 1 270 329 116 0 chr20 63565071 63565235 -3102770 + LTR33 LTR ERVL 305 487 -34 2263 86 0 3 chr20 63565243 63565547 -3102458 - AluSg SINE Alu -6 304 2 311 237 13 0 chr20 63565567 63565643 -3102362 - MIR SINE MIR -105 157 81 516 213 48 53 chr20 63565720 63565908 -3102097 + Charlie2 DNA MER1_type 46 232 -2550 551 254 194 7 chr20 63565908 63566196 -3101809 + Charlie2 DNA MER1_type 2050 2391 -471 312 327 73 24 chr20 63567943 63568108 -3099897 - L1M4c LINE L1 -4465 1919 1747 314 254 57 49 chr20 63568536 63568658 -3099347 + MIR SINE MIR 94 216 -46 2103 98 4 0 chr20 63568699 63569006 -3098999 - AluSp SINE Alu 0 313 6 1203 142 51 0 chr20 63570863 63571060 -3096945 + AluJb SINE Alu 85 291 -21 711 122 0 0 chr20 63571066 63571164 -3096841 + FLAM_C SINE Alu 38 135 -8 2183 114 3 22 chr20 63571172 63571489 -3096516 + AluSx SINE Alu 1 311 -1 739 100 0 0 chr20 63571508 63571608 -3096397 + AluJb SINE Alu 204 303 -9 1894 121 46 26 chr20 63571608 63571914 -3096091 + AluSx SINE Alu 1 312 0 736 174 94 13 chr20 63572332 63572481 -3095524 - AluSp SINE Alu -16 297 137 643 203 52 0 chr20 63572508 63572661 -3095344 + MER20 DNA MER1_type 1 161 -58 1832 115 72 0 chr20 63572814 63573092 -3094913 - AluSx SINE Alu -14 298 1 1920 141 17 7 chr20 63573092 63573389 -3094616 - AluJb SINE Alu -12 300 1 250 329 29 21 chr20 63574070 63574210 -3093795 + L2 LINE L2 2847 2987 -326 196 376 112 8 chr20 63574608 63574733 -3093272 + L2 LINE L2 3176 3313 0 183 294 0 39 chr20 63574841 63574892 -3093113 - L3 LINE CR1 -10 1567 1519 2006 122 7 17 chr20 63575590 63575885 -3092120 - AluJb SINE Alu -14 298 7 2031 131 7 0 chr20 63575899 63576197 -3091808 - AluSx SINE Alu -12 300 1 264 321 50 75 chr20 63576249 63576408 -3091597 - MER5B DNA MER1_type -21 157 3 405 181 53 0 chr20 63577186 63577280 -3090725 + MLT1C LTR MaLR 7 105 -362 1666 164 3 39 chr20 63577280 63577446 -3090559 - AluJo SINE Alu -12 300 149 2306 81 0 7 chr20 63577446 63577744 -3090261 - AluY SINE Alu -15 296 1 1666 164 3 39 chr20 63577744 63577887 -3090118 - AluJo SINE Alu -163 149 2 2448 67 0 3 chr20 63578423 63578735 -3089270 + AluY SINE Alu 1 311 0 2342 70 0 3 chr20 63579102 63579401 -3088604 - AluY SINE Alu -13 298 1 1982 140 0 3 chr20 63579828 63580128 -3087877 - AluSx SINE Alu -13 299 1 1734 159 24 0 chr20 63580797 63581086 -3086919 - AluJb SINE Alu -16 296 1 184 313 90 0 chr20 63581205 63581272 -3086733 - L3 LINE CR1 -319 1258 1186 1540 166 19 55 chr20 63581501 63581809 -3086196 + AluJo SINE Alu 1 297 -15 1610 151 10 53 chr20 63582056 63582282 -3085723 - AluJb SINE Alu -21 291 80 2339 88 3 0 chr20 63582282 63582590 -3085415 + AluSg SINE Alu 1 309 -1 1610 151 10 53 chr20 63582590 63582667 -3085338 - AluJb SINE Alu -232 80 1 2276 106 0 0 chr20 63582669 63582971 -3085034 - AluSq SINE Alu 0 313 12 230 345 0 0 chr20 63583032 63583116 -3084889 - L1MA9 LINE L1 -5 6307 6224 640 184 120 0 chr20 63583123 63583281 -3084724 + LTR55 LTR ERV 51 227 -321 345 294 10 0 chr20 63583464 63583566 -3084439 - MER63A DNA MER1_type -37 173 71 230 281 91 33 chr20 63584352 63584473 -3083532 + MIR SINE MIR 106 233 -29 868 200 0 0 chr20 63584701 63584861 -3083144 - AluJb SINE Alu 0 312 153 853 78 35 0 chr20 63585627 63585742 -3082263 - AluSq/x SINE Alu -180 132 14 2239 93 0 13 chr20 63587021 63587331 -3080674 + AluSx SINE Alu 1 306 -6 1624 198 0 22 chr20 63587367 63587686 -3080319 - AluJb SINE Alu 0 312 1 756 171 0 0 chr20 63589203 63589367 -3078638 + (CACCC)n Simple_repeat Simple_repeat 3 166 0 1054 176 0 0 chr20 63591064 63591246 -3076759 - MER46A DNA MER2_type -37 199 18 257 342 18 0 chr20 63593746 63593857 -3074148 + HAL1 LINE L1 110 222 -2285 411 263 128 83 chr20 63594121 63594190 -3073815 + HAL1 LINE L1 879 943 -1564 1797 143 6 38 chr20 63594190 63594504 -3073501 - AluJb SINE Alu -8 304 1 411 263 128 83 chr20 63594504 63594894 -3073111 + HAL1 LINE L1 943 1359 -1148 521 311 148 21 chr20 63595299 63595726 -3072279 + L1MC4 LINE L1 7514 7994 -48 315 250 189 34 chr20 63595733 63595881 -3072124 + HAL1 LINE L1 1667 1837 -670 279 279 90 16 chr20 63595936 63596058 -3071947 + HAL1 LINE L1 2020 2150 -357 2273 132 24 16 chr20 63596286 63596658 -3071347 + THE1C LTR MaLR 1 375 0 208 273 21 86 chr20 63597602 63597789 -3070216 + G-rich Low_complexity Low_complexity 3 177 0 738 129 9 0 chr20 63598867 63598983 -3069022 + AluJb SINE Alu 196 312 0 249 277 24 0 chr20 63599238 63599321 -3068684 - MER117 DNA MER1_type -16 181 97 235 319 0 0 chr20 63599951 63600020 -3067985 - MIR SINE MIR -93 169 101 194 195 49 0 chr20 63602071 63602112 -3065893 - MIR SINE MIR 0 262 220 485 263 83 74 chr20 63602569 63602699 -3065306 + MLT1B LTR MaLR 50 177 -213 2116 69 12 62 chr20 63602699 63603019 -3064986 + AluSp SINE Alu 1 304 -9 485 263 83 74 chr20 63603019 63603226 -3064779 + MLT1B LTR MaLR 177 390 0 477 257 84 106 chr20 63604232 63604469 -3063536 + MIR SINE MIR 21 252 -10 229 183 33 75 chr20 63605616 63605736 -3062269 + (CCCCG)n Simple_repeat Simple_repeat 3 117 0 29 94 0 0 chr20 63605904 63605989 -3062016 + GC_rich Low_complexity Low_complexity 1 85 0 21 0 0 0 chr20 63606300 63606321 -3061684 + GC_rich Low_complexity Low_complexity 1 21 0 266 269 0 34 chr20 63606427 63606546 -3061459 + G-rich Low_complexity Low_complexity 3 117 0 26 50 0 0 chr20 63606720 63606760 -3061245 + GC_rich Low_complexity Low_complexity 1 40 0 582 296 42 14 chr20 63607485 63607698 -3060307 + MER20 DNA MER1_type 1 219 0 1391 154 75 19 chr20 63608371 63608637 -3059368 - AluJb SINE Alu -30 282 2 382 250 23 0 chr20 63609456 63609544 -3058461 + Tigger5 DNA MER2_type 2234 2323 0 2217 99 0 10 chr20 63610771 63611074 -3056931 + AluSq SINE Alu 5 304 -9 344 330 139 24 chr20 63611549 63611758 -3056247 - MIR SINE MIR -8 254 22 186 43 0 0 chr20 63612486 63612509 -3055496 + (CTG)n Simple_repeat Simple_repeat 2 24 0 214 171 24 0 chr20 63612717 63612758 -3055247 + GA-rich Low_complexity Low_complexity 1 42 0 989 304 121 20 chr20 63616834 63617330 -3050675 + L2 LINE L2 2278 2823 -491 2110 112 3 20 chr20 63618560 63618863 -3049142 - AluSx SINE Alu -14 298 1 28 0 0 0 chr20 63619578 63619606 -3048399 + AT_rich Low_complexity Low_complexity 1 28 0 2087 131 0 0 chr20 63622618 63622908 -3045097 - AluSg SINE Alu -20 290 1 2082 109 7 3 chr20 63623536 63623829 -3044176 - AluSx SINE Alu 0 312 19 2208 108 0 0 chr20 63624446 63624742 -3043263 + AluSc SINE Alu 1 296 -13 28 48 0 0 chr20 63626501 63626543 -3041462 + GC_rich Low_complexity Low_complexity 1 42 0 21 0 0 0 chr20 63626743 63626764 -3041241 + GC_rich Low_complexity Low_complexity 1 21 0 29 60 0 0 chr20 63626997 63627047 -3040958 + GC_rich Low_complexity Low_complexity 1 50 0 28 61 0 0 chr20 63627537 63627586 -3040419 + GC_rich Low_complexity Low_complexity 1 49 0 25 0 0 0 chr20 63627771 63627796 -3040209 + GC_rich Low_complexity Low_complexity 1 25 0 2002 123 0 16 chr20 63628196 63628513 -3039492 + AluSx SINE Alu 1 312 0 1442 167 20 59 chr20 63628542 63628847 -3039158 + AluJo SINE Alu 11 303 -9 258 314 20 0 chr20 63628849 63628951 -3039054 - MER112 DNA MER1_type -124 136 33 215 310 28 0 chr20 63628970 63629041 -3038964 - MIR SINE MIR -91 171 99 296 273 0 13 chr20 63631114 63631191 -3036814 + C-rich Low_complexity Low_complexity 3 78 0 225 297 51 51 chr20 63631747 63631865 -3036140 - MIR SINE MIR -128 134 17 2224 101 3 22 chr20 63633010 63633326 -3034679 + AluSx SINE Alu 1 310 -2 510 328 140 9 chr20 63633331 63633560 -3034445 - MIR SINE MIR 0 262 4 1860 154 11 0 chr20 63633638 63633950 -3034055 + AluJo SINE Alu 1 315 0 1906 142 16 13 chr20 63633962 63634265 -3033740 + AluJb SINE Alu 2 305 -7 2040 136 0 0 chr20 63634661 63634963 -3033042 - AluSx SINE Alu -10 302 1 2225 89 0 13 chr20 63634963 63635266 -3032739 - AluSg SINE Alu 0 310 12 1601 162 0 57 chr20 63635266 63635581 -3032424 - AluJo SINE Alu -5 307 11 291 54 0 0 chr20 63637414 63637451 -3030554 + (TCCCC)n Simple_repeat Simple_repeat 1 37 0 1084 174 67 82 chr20 63637451 63637733 -3030272 - AluJb SINE Alu -24 288 11 465 119 0 0 chr20 63637757 63637824 -3030181 - L1MA1 LINE L1 -6 6296 6230 2076 59 63 0 chr20 63637832 63638141 -3029864 - AluY SINE Alu 0 326 1 2283 155 2 2 chr20 63638142 63638549 -3029456 - MSTA-int LTR MaLR -1244 407 1 1712 169 118 87 chr20 63638549 63638594 -3029411 - MSTA LTR MaLR 0 428 386 2495 74 0 0 chr20 63638594 63638905 -3029100 + AluY SINE Alu 1 311 0 1712 169 118 87 chr20 63638905 63638933 -3029072 - MSTA LTR MaLR -42 386 360 2139 99 7 3 chr20 63638933 63639225 -3028780 - AluSg SINE Alu -17 293 1 1712 169 118 87 chr20 63639225 63639565 -3028440 - MSTA LTR MaLR -68 360 1 2441 66 0 7 chr20 63639570 63639874 -3028131 - AluY SINE Alu -7 304 3 3025 200 37 67 chr20 63639875 63640631 -3027374 - L1M4 LINE L1 -1141 5005 4228 1729 153 22 0 chr20 63640631 63640899 -3027106 - AluJo SINE Alu -8 304 31 3025 200 37 67 chr20 63640899 63640980 -3027025 - L1M4 LINE L1 -1918 4228 4194 2225 100 6 19 chr20 63640980 63641291 -3026714 - AluSp SINE Alu -6 307 1 3025 200 37 67 chr20 63641291 63641344 -3026661 - L1M4 LINE L1 -1952 4194 4141 233 291 151 0 chr20 63641349 63641435 -3026570 - MIR SINE MIR -59 149 51 868 190 98 0 chr20 63641756 63641961 -3026044 - MSTA LTR MaLR -40 388 164 205 348 117 42 chr20 63642277 63642610 -3025395 - L2 LINE L2 -98 3174 2817 1176 162 0 0 chr20 63642779 63642958 -3025047 - AluJb SINE Alu 0 312 134 1654 136 88 0 chr20 63642958 63643230 -3024775 - AluSq SINE Alu -15 298 3 1230 176 0 0 chr20 63643560 63643923 -3024082 + (TCCA)n Simple_repeat Simple_repeat 1 363 0 218 329 29 0 chr20 63643948 63644018 -3023987 - L2 LINE L2 -46 3226 3155 206 236 292 7 chr20 63644223 63644367 -3023638 + L2 LINE L2 2871 3055 -217 278 278 0 81 chr20 63644615 63644788 -3023217 + C-rich Low_complexity Low_complexity 6 164 0 188 319 67 15 chr20 63644797 63644932 -3023073 + L2 LINE L2 1617 1758 -1556 316 298 128 21 chr20 63645317 63645559 -3022446 + L2 LINE L2 2394 2661 -653 222 260 94 72 chr20 63645615 63645880 -3022125 + L2 LINE L2 2840 3110 -203 215 300 9 5 chr20 63646179 63646260 -3021745 - MIR SINE MIR -64 144 66 2169 101 3 3 chr20 63646295 63646591 -3021414 - AluSx SINE Alu -16 296 1 1943 166 89 0 chr20 63646664 63647044 -3020961 - MSTB LTR MaLR -12 414 1 792 286 183 46 chr20 63647749 63648443 -3019562 + HAL1 LINE L1 407 1255 -1252 2026 130 0 7 chr20 63648443 63648744 -3019261 + AluSx SINE Alu 1 299 -13 792 286 183 46 chr20 63648744 63648949 -3019056 + HAL1 LINE L1 1255 1430 -1077 243 287 35 0 chr20 63650070 63650157 -3017848 - MER5B DNA MER1_type -86 92 3 2265 93 3 3 chr20 63650800 63651110 -3016895 - AluSg SINE Alu 0 310 1 1597 189 3 3 chr20 63653250 63653546 -3014459 - AluJo SINE Alu -16 296 1 771 149 15 22 chr20 63653548 63653682 -3014323 - AluJo/FLAM SINE Alu -169 133 1 594 75 0 0 chr20 63653696 63653776 -3014229 + (CTATT)n Simple_repeat Simple_repeat 2 81 0 1922 110 33 0 chr20 63653776 63654049 -3013956 - AluSx SINE Alu -30 282 1 192 289 13 40 chr20 63654363 63654439 -3013566 - MER5B DNA MER1_type 0 178 105 2369 76 0 0 chr20 63654567 63654870 -3013135 + AluY SINE Alu 1 303 -8 2111 123 0 0 chr20 63654895 63655188 -3012817 + AluSq SINE Alu 1 293 -20 1327 201 45 34 chr20 63655412 63655756 -3012249 - MLT1A1 LTR MaLR -15 350 7 3354 232 46 98 chr20 63655771 63655994 -3012011 - MLT1A1-int LTR MaLR -29 1342 1109 1985 148 3 0 chr20 63655994 63656298 -3011707 + AluSx SINE Alu 1 305 -7 3354 232 46 98 chr20 63656298 63656928 -3011077 - MLT1A1-int LTR MaLR -262 1109 588 2365 85 0 0 chr20 63656928 63657235 -3010770 - AluY SINE Alu -4 307 1 3354 232 46 98 chr20 63657235 63657790 -3010215 - MLT1A1-int LTR MaLR -783 588 6 291 211 0 0 chr20 63657795 63657850 -3010155 - MLT2B1 LTR ERVL 0 520 466 236 205 0 0 chr20 63657850 63657880 -3010125 - Tigger3b DNA MER2_type 0 1231 1202 1034 214 0 19 chr20 63657880 63658084 -3009921 - Tigger3b DNA MER2_type -2 1239 1040 2274 157 30 28 chr20 63658084 63658460 -3009545 + MSTC LTR MaLR 1 380 -48 1999 119 0 26 chr20 63658460 63658763 -3009242 + AluSg SINE Alu 1 295 -15 2274 157 30 28 chr20 63658763 63658813 -3009192 + MSTC LTR MaLR 380 428 0 * 4305 139 54 107 chr20 63658813 63658863 -3009142 - Tigger3b DNA MER2_type -2008 1020 969 2026 107 4 0 chr20 63658863 63659173 -3008832 + AluSx SINE Alu 1 311 0 4305 139 54 107 chr20 63659173 63659377 -3008628 - Tigger3b DNA MER2_type -2059 969 756 1733 161 0 34 chr20 63659377 63659675 -3008330 + AluJo SINE Alu 1 288 -24 4305 139 54 107 chr20 63659675 63660169 -3007836 - Tigger3b DNA MER2_type -2272 756 238 1945 140 0 10 chr20 63660169 63660469 -3007536 + AluJo SINE Alu 1 297 -15 2047 143 0 0 chr20 63660475 63660782 -3007223 + AluSx SINE Alu 6 312 0 4305 139 54 107 chr20 63660782 63661100 -3006905 - Tigger3b DNA MER2_type -2795 233 1 234 0 0 0 chr20 63661104 63661130 -3006875 + (TG)n Simple_repeat Simple_repeat 1 26 0 263 380 0 0 chr20 63661185 63661327 -3006678 + (TG)n Simple_repeat Simple_repeat 1 142 0 * 338 324 0 43 chr20 63661272 63661457 -3006548 + (CGTG)n Simple_repeat Simple_repeat 1 177 0 * 470 341 0 0 chr20 63661344 63661523 -3006482 + (TG)n Simple_repeat Simple_repeat 1 179 0 343 358 0 6 chr20 63661619 63661795 -3006210 + (TG)n Simple_repeat Simple_repeat 2 176 0 388 350 0 6 chr20 63661811 63662055 -3005950 + (TG)n Simple_repeat Simple_repeat 1 242 0 543 263 30 0 chr20 63662654 63662787 -3005218 - MLT1C LTR MaLR -1 589 453 189 300 116 58 chr20 63662908 63663098 -3004907 - L2 LINE L2 -1798 1516 1316 2129 103 0 52 chr20 63663185 63663514 -3004491 - AluSx SINE Alu 0 312 1 2440 57 0 0 chr20 63663699 63663995 -3004010 + AluY SINE Alu 1 296 -15 233 229 0 0 chr20 63664259 63664307 -3003698 + MER45A DNA AcHobo 82 129 -49 1460 200 72 38 chr20 63664318 63664718 -3003287 - MLT1C LTR MaLR -12 455 42 781 158 5 119 chr20 63664823 63664937 -3003068 - L1MB2 LINE L1 -123 6048 5965 2170 97 0 7 chr20 63664937 63665246 -3002759 - AluJb SINE Alu -5 307 1 781 158 5 119 chr20 63665246 63665333 -3002672 - L1MB2 LINE L1 -206 5965 5870 271 175 0 0 chr20 63665350 63665407 -3002598 - L1MB2 LINE L1 0 6171 6115 1071 203 23 0 chr20 63665414 63665631 -3002374 - L1MA7 LINE L1 0 6291 6070 967 208 116 33 chr20 63665723 63666026 -3001979 - MLT2B3 LTR ERVL -4 550 223 705 209 0 0 chr20 63666026 63666184 -3001821 + GA-rich Low_complexity Low_complexity 2 159 0 333 161 0 0 chr20 63666185 63666241 -3001764 + Alu SINE Alu 243 298 -2 350 198 66 11 chr20 63666241 63666332 -3001673 + L1MB3 LINE L1 6048 6143 -40 242 182 73 0 chr20 63666343 63666398 -3001607 + L1MB2 LINE L1 5455 5513 -778 1922 146 20 78 chr20 63666431 63666482 -3001523 - THE1C LTR MaLR 0 375 323 2118 118 3 0 chr20 63666482 63666787 -3001218 - AluSq SINE Alu -7 306 1 1922 146 20 78 chr20 63666787 63667133 -3000872 - THE1C LTR MaLR -52 323 1 376 288 36 22 chr20 63667256 63667395 -3000610 - MIR3 SINE MIR -48 160 20 2389 180 45 28 chr20 63667402 63667854 -3000151 - L1MB2 LINE L1 -2 6169 5705 2181 108 3 0 chr20 63667854 63668151 -2999854 + AluSg SINE Alu 1 298 -12 2389 180 45 28 chr20 63668151 63668227 -2999778 - L1MB2 LINE L1 -466 5705 5632 2194 82 16 10 chr20 63668238 63668542 -2999463 - AluY SINE Alu -5 306 1 722 207 10 113 chr20 63668626 63668829 -2999176 + MER63A DNA MER1_type 3 184 -26 261 241 0 0 chr20 63668961 63669015 -2998990 - MER45 DNA AcHobo 0 1581 1528 332 174 14 14 chr20 63669055 63669124 -2998881 + L1MB2 LINE L1 5991 6059 -112 504 195 0 0 chr20 63669124 63669206 -2998799 + FRAM SINE Alu 12 93 -83 1549 149 24 64 chr20 63669214 63669491 -2998514 + THE1C LTR MaLR 60 324 -51 2117 118 3 0 chr20 63669491 63669796 -2998209 + AluSq SINE Alu 1 306 -7 1549 149 24 64 chr20 63669796 63669847 -2998158 + THE1C LTR MaLR 324 375 0 1228 254 123 11 chr20 63669858 63670327 -2997678 - L1ME LINE L1 -370 5800 5281 1926 153 7 0 chr20 63670357 63670652 -2997353 - AluJb SINE Alu -15 297 1 1592 170 0 44 chr20 63670726 63670876 -2997129 - AluJo SINE Alu -29 283 151 2243 69 3 29 chr20 63670876 63671182 -2996823 - AluY SINE Alu -13 298 1 1592 170 0 44 chr20 63671182 63671325 -2996680 - AluJo SINE Alu -161 151 3 244 231 55 11 chr20 63671441 63671532 -2996473 - L1MCa LINE L1 -4821 1605 1511 1264 198 8 4 chr20 63671539 63671776 -2996229 - AluJo SINE Alu -74 238 1 1777 281 106 39 chr20 63671782 63672049 -2995956 - L1MEc LINE L1 -3678 2402 2154 2089 108 0 42 chr20 63672049 63672356 -2995649 + AluSx SINE Alu 1 294 -18 1777 281 106 39 chr20 63672356 63672850 -2995155 - L1MEc LINE L1 -3926 2154 1695 2293 90 0 0 chr20 63672850 63673149 -2994856 - AluY SINE Alu -10 301 3 1777 281 106 39 chr20 63673149 63673228 -2994777 - L1MEc LINE L1 -4385 1695 1623 2320 76 0 10 chr20 63673228 63673529 -2994476 - AluY SINE Alu -13 298 1 1777 281 106 39 chr20 63673529 63673685 -2994320 - L1MEc LINE L1 -4457 1623 1479 1783 161 17 7 chr20 63673685 63673983 -2994022 - AluSx SINE Alu -9 303 3 1777 281 106 39 chr20 63673983 63674435 -2993570 - L1MEc LINE L1 -4601 1479 1059 1683 161 3 7 chr20 63674435 63674726 -2993279 + AluJb SINE Alu 2 291 -21 1777 281 106 39 chr20 63674726 63674777 -2993228 - L1MEc LINE L1 -5021 1059 1013 1646 139 16 46 chr20 63674777 63675080 -2992925 + AluJb SINE Alu 1 294 -18 1777 281 106 39 chr20 63675080 63675246 -2992759 - L1MEc LINE L1 -5067 1013 653 342 0 0 0 chr20 63675269 63675307 -2992698 + (TG)n Simple_repeat Simple_repeat 1 38 0 842 281 45 0 chr20 63675308 63675532 -2992473 - L1MEc LINE L1 -5528 542 309 4047 99 0 0 chr20 63675541 63676088 -2991917 - HERVL LTR ERVL -835 4819 4273 1969 174 37 25 chr20 63676107 63676655 -2991350 - MLT2A2 LTR ERVL 0 554 1 803 293 61 7 chr20 63676657 63676937 -2991068 - L1MEc LINE L1 -5773 297 3 373 256 30 108 chr20 63676937 63677061 -2990944 - L1M4 LINE L1 -1508 4638 4506 7573 34 11 4 chr20 63677061 63678537 -2989468 - L1PA5 LINE L1 0 6154 4671 373 256 30 108 chr20 63678537 63678717 -2989288 - L1M4 LINE L1 -1640 4506 4358 1296 165 129 22 chr20 63678877 63679149 -2988856 - AluSx SINE Alu -11 301 1 184 287 53 43 chr20 63679707 63679801 -2988204 + MIR SINE MIR 50 144 -118 1228 224 148 27 chr20 63680101 63680507 -2987498 + MLT1C LTR MaLR 6 460 -7 1298 167 7 78 chr20 63680703 63680985 -2987020 - AluJo SINE Alu -36 276 15 23 0 0 0 chr20 63681169 63681192 -2986813 + AT_rich Low_complexity Low_complexity 1 23 0 63 56 0 28 chr20 63683365 63683507 -2984498 + GC_rich Low_complexity Low_complexity 1 138 0 25 31 0 0 chr20 63683636 63683668 -2984337 + GC_rich Low_complexity Low_complexity 1 32 0 287 261 127 22 chr20 63691461 63691595 -2976410 - L1ME4a LINE L1 -3 6118 5971 2154 118 0 0 chr20 63692034 63692339 -2975666 - AluSx SINE Alu -7 305 1 208 266 333 22 chr20 63692429 63692651 -2975354 - L2 LINE L2 -92 3221 2931 1040 250 77 26 chr20 63701134 63701596 -2966409 + L1ME1 LINE L1 5045 5530 -644 1176 282 87 12 chr20 63701669 63702073 -2965932 + L1ME1 LINE L1 5728 6161 -5 264 209 154 22 chr20 63703385 63703476 -2964529 - L1MC5 LINE L1 -1143 6818 6716 540 289 170 35 chr20 63703573 63703915 -2964090 - L1MC4a LINE L1 -1290 6518 6131 4616 161 85 20 chr20 63704411 63704988 -2963017 - Tigger3b DNA MER2_type -1797 1231 693 1547 147 26 15 chr20 63704988 63705253 -2962752 - AluJb SINE Alu -43 269 2 4616 161 85 20 chr20 63705253 63705599 -2962406 - Tigger3b DNA MER2_type -2335 693 240 2975 173 186 46 chr20 63705599 63706323 -2961682 - LTR1B LTR ERV1 0 826 1 4616 161 85 20 chr20 63706323 63706359 -2961646 - Tigger3b DNA MER2_type -2788 240 208 1191 173 150 38 chr20 63706365 63706631 -2961374 - AluJo SINE Alu -6 296 1 1654 101 0 0 chr20 63706643 63706871 -2961134 - AluY SINE Alu -8 303 76 247 290 0 0 chr20 63706871 63706933 -2961072 - Tigger3b DNA MER2_type -1169 62 1 862 272 80 29 chr20 63707233 63707681 -2960324 - L1MD1 LINE L1 -355 5887 5417 * 2310 263 58 59 chr20 63707678 63709222 -2958783 - L1ME1 LINE L1 -5 6161 4602 2013 103 10 27 chr20 63709222 63709523 -2958482 - AluSx SINE Alu -16 296 1 2310 263 58 59 chr20 63709523 63709809 -2958196 - L1ME1 LINE L1 -1564 4602 4317 1041 78 0 0 chr20 63709838 63709967 -2958038 + AluY SINE Alu 6 134 -177 2301 81 3 0 chr20 63709967 63710276 -2957729 + AluY SINE Alu 1 310 -1 1699 246 45 27 chr20 63710916 63711192 -2956813 - L1ME1 LINE L1 -1892 4254 3984 1168 176 176 22 chr20 63711192 63711505 -2956500 - MLT1A1 LTR MaLR 0 365 5 1699 246 45 27 chr20 63711505 63711784 -2956221 - L1ME1 LINE L1 -2162 3984 3689 260 284 82 53 chr20 63711817 63711969 -2956036 - L1ME LINE L1 -597 5565 5404 2164 85 0 23 chr20 63711969 63712274 -2955731 + AluSq SINE Alu 1 298 -15 260 284 82 53 chr20 63712274 63712329 -2955676 - L1ME LINE L1 -758 5404 5352 1473 284 47 43 chr20 63712351 63713174 -2954831 - L1MD1 LINE L1 -757 5389 4571 2476 54 0 0 chr20 63713174 63713470 -2954535 + AluY SINE Alu 1 296 -15 1473 284 47 43 chr20 63713470 63713664 -2954341 - L1MD1 LINE L1 -1575 4571 4365 1844 145 0 23 chr20 63713664 63713968 -2954037 + AluJo SINE Alu 1 297 -15 1473 284 47 43 chr20 63713968 63714032 -2953973 - L1MD1 LINE L1 -1781 4365 4303 2351 80 0 0 chr20 63714232 63714533 -2953472 - AluY SINE Alu -10 301 1 2127 128 0 0 chr20 63714534 63714839 -2953166 - AluSq SINE Alu -8 305 1 2198 97 0 0 chr20 63718369 63718668 -2949337 - AluSc SINE Alu -10 299 1 219 114 0 0 chr20 63718772 63718807 -2949198 + (TG)n Simple_repeat Simple_repeat 1 35 0 2378 70 0 0 chr20 63719081 63719379 -2948626 - AluY SINE Alu -13 298 1 866 229 138 0 chr20 63719731 63719941 -2948064 + MER8 DNA MER2_type 1 239 0 2248 263 99 33 chr20 63722283 63722528 -2945477 - L1ME1 LINE L1 -5 6161 5934 1639 154 128 18 chr20 63722528 63722865 -2945140 - THE1C LTR MaLR -1 374 1 2248 263 99 33 chr20 63722865 63723409 -2944596 - L1ME1 LINE L1 -232 5934 5427 2054 111 0 10 chr20 63723409 63723707 -2944298 - AluSx SINE Alu -17 295 1 2248 263 99 33 chr20 63723707 63724209 -2943796 - L1ME1 LINE L1 -739 5427 4960 1685 140 19 4 chr20 63724209 63724480 -2943525 - AluSx SINE Alu -24 288 14 2248 263 99 33 chr20 63724480 63724516 -2943489 - L1ME1 LINE L1 -1206 4960 4928 2114 98 0 0 chr20 63724516 63724802 -2943203 - AluSx SINE Alu 0 312 27 2248 263 99 33 chr20 63724802 63724842 -2943163 - L1ME1 LINE L1 -1238 4928 4892 1722 147 41 3 chr20 63724842 63725134 -2942871 - AluSx SINE Alu -9 303 1 2248 263 99 33 chr20 63725134 63725371 -2942634 - L1ME1 LINE L1 -1274 4892 4457 24 32 0 0 chr20 63726436 63726467 -2941538 + AT_rich Low_complexity Low_complexity 1 31 0 388 304 109 39 chr20 63726941 63727483 -2940522 - HAL1 LINE L1 -685 1822 1243 313 202 34 45 chr20 63727588 63727677 -2940328 - HAL1 LINE L1 -1590 917 830 331 304 30 7 chr20 63727711 63727846 -2940159 + L1MEd LINE L1 15 152 -5967 278 316 51 0 chr20 63728152 63728250 -2939755 + L1MEd LINE L1 572 674 -5445 291 315 110 0 chr20 63728817 63728944 -2939061 + L1ME LINE L1 5713 5853 -268 1162 112 24 0 chr20 63730440 63730610 -2937395 - AluSg/x SINE Alu -10 302 129 2257 75 0 38 chr20 63730619 63730937 -2937068 - AluY SINE Alu -5 306 1 1491 177 30 33 chr20 63731133 63731432 -2936573 - AluJo SINE Alu -10 302 5 1943 166 63 31 chr20 63731513 63732046 -2935959 - MLT2A2 LTR ERVL 0 554 6 225 276 35 0 chr20 63734058 63734116 -2933889 + MIR SINE MIR 99 158 -104 405 39 0 0 chr20 63734229 63734280 -2933725 + (CA)n Simple_repeat Simple_repeat 1 51 0 405 0 0 0 chr20 63734342 63734387 -2933618 + (CA)n Simple_repeat Simple_repeat 1 45 0 180 111 0 0 chr20 63735665 63735692 -2932313 + (T)n Simple_repeat Simple_repeat 1 27 0 239 352 37 0 chr20 63738812 63738920 -2929085 - L1ME LINE L1 -400 5721 5610 627 201 110 0 chr20 63741117 63741271 -2926734 - L1MA4A LINE L1 -11 6292 6122 297 339 93 11 chr20 63743167 63743350 -2924655 + MER46C DNA MER2_type 141 338 0 1838 145 19 16 chr20 63743667 63743978 -2924027 + AluJb SINE Alu 1 312 0 433 168 103 9 chr20 63744632 63744739 -2923266 - L1MB3 LINE L1 0 6183 6067 1415 207 7 20 chr20 63745501 63745796 -2922209 + AluJo SINE Alu 3 293 -19 880 255 27 23 chr20 63746204 63746511 -2921494 + L1MC4 LINE L1 6521 6902 -991 307 337 56 17 chr20 63746792 63746970 -2921035 + L1MC4 LINE L1 7455 7639 -403 247 300 67 0 chr20 63747088 63747178 -2920827 + L1MC4 LINE L1 7805 7900 -142 1661 181 0 10 chr20 63748336 63748629 -2919376 - AluSx SINE Alu -21 291 2 943 291 27 35 chr20 63751180 63751475 -2916530 - L1M4c LINE L1 -4462 2676 2383 2255 90 7 0 chr20 63751475 63751775 -2916230 - AluSc SINE Alu -7 302 1 943 291 27 35 chr20 63751775 63751881 -2916124 - L1M4c LINE L1 -4755 2383 2278 1312 130 4 43 chr20 63751889 63752120 -2915885 - AluJb SINE Alu -8 304 83 733 273 87 38 chr20 63752245 63752397 -2915608 - L1M4c LINE L1 -4818 2139 1996 2830 6 0 0 chr20 63752397 63752712 -2915293 - AluYb8 SINE Alu -3 315 1 733 273 87 38 chr20 63752712 63753152 -2914853 - L1M4c LINE L1 -4961 1996 1363 2179 82 0 0 chr20 63754266 63754547 -2913458 + AluSg SINE Alu 24 304 -6 1046 296 82 53 chr20 63754782 63755801 -2912204 - L1MC5 LINE L1 -455 7506 6478 420 370 126 17 chr20 63756160 63756582 -2911423 - HAL1b LINE L1 -703 645 178 777 159 30 0 chr20 63756670 63756802 -2911203 - AluJb SINE Alu -1 311 176 1963 114 25 41 chr20 63756841 63757157 -2910848 - AluSx SINE Alu -1 311 1 277 213 0 16 chr20 63757948 63758009 -2909996 - L1MC4 LINE L1 -1 8041 7982 448 291 145 64 chr20 63758869 63759289 -2908716 - L1MC4a LINE L1 -908 6900 6447 460 186 48 0 chr20 63759752 63759861 -2908144 - L1MD3 LINE L1 -10 7985 7655 4682 166 48 14 chr20 63759903 63760326 -2907679 - L1MC1 LINE L1 -2 6331 5909 1131 295 42 39 chr20 63760326 63760920 -2907085 - L1MA3 LINE L1 -416 5889 5294 * 1846 275 115 19 chr20 63760902 63761756 -2906249 - L1MC4a LINE L1 -169 7708 6773 813 283 102 62 chr20 63762389 63762841 -2905164 - L1MC4a LINE L1 -1077 6800 6331 626 244 0 7 chr20 63762862 63762997 -2905008 - FLAM_A SINE Alu -8 134 1 659 251 60 14 chr20 63763054 63763269 -2904736 - L1MC4a LINE L1 -1541 6336 6112 351 371 0 0 chr20 63763272 63763442 -2904563 + C-rich Low_complexity Low_complexity 1 170 0 342 313 23 8 chr20 63763844 63763972 -2904033 - L1MC4a LINE L1 -2110 5767 5638 258 305 48 0 chr20 63764427 63764594 -2903411 - L1MC4a LINE L1 -4003 2393 2219 1480 193 7 30 chr20 63764615 63764920 -2903085 - AluJo SINE Alu -14 298 1 307 192 167 0 chr20 63764931 63765009 -2902996 - L1MC1 LINE L1 -2665 5377 5287 216 283 33 56 chr20 63769554 63769734 -2898271 + (CCTCG)n Simple_repeat Simple_repeat 4 179 0 229 283 46 17 chr20 63771104 63771277 -2896728 + (TCGTG)n Simple_repeat Simple_repeat 1 178 0 298 158 0 26 chr20 63772584 63772660 -2895345 + C-rich Low_complexity Low_complexity 3 76 0 1182 220 143 22 chr20 63774128 63774528 -2893477 - MLT1C LTR MaLR -12 455 8 740 356 96 11 chr20 63774999 63775665 -2892340 + L1ME3 LINE L1 4072 4794 -1352 271 283 125 0 chr20 63775770 63775890 -2892115 + L1ME3 LINE L1 5044 5178 -968 689 250 113 5 chr20 63776257 63776560 -2891445 + L1ME3 LINE L1 5191 5484 -678 1292 290 97 8 chr20 63777695 63778212 -2889793 + L1ME3 LINE L1 5596 6158 -4 1835 113 24 14 chr20 63778707 63778999 -2889006 + AluSx SINE Alu 5 299 -13 341 196 271 0 chr20 63779938 63780045 -2887960 + L1ME LINE L1 5579 5714 -450 428 240 91 32 chr20 63780150 63780332 -2887673 + L1MA10 LINE L1 5980 6334 0 363 192 19 68 chr20 63780414 63780723 -2887282 + G-rich Low_complexity Low_complexity 1 293 0 301 276 176 28 chr20 63781336 63781586 -2886419 + MLT1K LTR MaLR 190 476 -112 250 231 0 0 chr20 63782174 63782226 -2885779 + MIR SINE MIR 108 159 -103 274 274 12 49 chr20 63782337 63782501 -2885504 + G-rich Low_complexity Low_complexity 5 162 0 198 0 0 0 chr20 63783535 63783557 -2884448 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 1479 162 46 0 chr20 63783578 63783819 -2884186 + AluJo SINE Alu 9 260 -52 1269 278 67 18 chr20 63783887 63784089 -2883916 - L1M4 LINE L1 -1525 4621 4430 2682 97 14 3 chr20 63784089 63784449 -2883556 + THE1B LTR MaLR 1 364 0 1269 278 67 18 chr20 63784449 63784797 -2883208 - L1M4 LINE L1 -1716 4430 4044 2308 85 0 0 chr20 63785121 63785428 -2882577 - AluY SINE Alu -4 307 1 1693 149 28 7 chr20 63785429 63785717 -2882288 - AluJo SINE Alu -18 294 1 333 228 33 11 chr20 63786038 63786130 -2881875 + MLT1C LTR MaLR 359 452 -15 2070 273 80 39 chr20 63786145 63786668 -2881337 + L1MEc LINE L1 465 896 -5217 927 144 0 0 chr20 63786668 63786800 -2881205 + FLAM_C SINE Alu 1 132 -1 2070 273 80 39 chr20 63786800 63787172 -2880833 + L1MEc LINE L1 896 1251 -4862 1335 152 0 0 chr20 63787173 63787383 -2880622 + AluJb SINE Alu 1 210 -102 392 291 26 66 chr20 63787488 63787591 -2880414 + L1M1 LINE L1 2773 2879 -4765 2032 116 31 0 chr20 63787591 63787883 -2880122 - AluSx SINE Alu -11 301 1 392 291 26 66 chr20 63787883 63788013 -2879992 + L1M1 LINE L1 2879 3072 -4572 598 184 0 35 chr20 63788017 63788158 -2879847 - MER51C LTR ERV1 0 640 505 25 0 0 0 chr20 63788162 63788187 -2879818 + AT_rich Low_complexity Low_complexity 1 25 0 350 244 9 25 chr20 63788581 63788688 -2879317 - MER51A LTR ERV1 -89 545 429 283 208 104 13 chr20 63788717 63788794 -2879211 - MER51C LTR ERV1 -211 429 346 2704 258 43 6 chr20 63789043 63789807 -2878198 + L1ME1 LINE L1 5293 6082 -84 664 159 24 8 chr20 63789809 63789935 -2878070 + L1ME1 LINE L1 6029 6156 -10 1686 164 3 23 chr20 63789940 63790245 -2877760 - AluJo SINE Alu -13 299 1 2481 110 13 37 chr20 63790252 63790375 -2877630 - L1PB3 LINE L1 0 6154 6030 2212 91 7 0 chr20 63790375 63790673 -2877332 - AluSp SINE Alu -13 300 1 2481 110 13 37 chr20 63790673 63790930 -2877075 - L1PB3 LINE L1 -124 6030 5783 312 158 0 0 chr20 63790958 63791015 -2876990 + (TCCA)n Simple_repeat Simple_repeat 3 59 0 5390 162 34 4 chr20 63791018 63791332 -2876673 - L1PB3 LINE L1 -366 5788 5485 3764 79 72 45 chr20 63791332 63791911 -2876094 + LTR61 LTR ERV1 1 595 0 5390 162 34 4 chr20 63791911 63793213 -2874792 - L1PB3 LINE L1 -669 5485 4123 215 364 10 30 chr20 63793618 63793717 -2874288 + L3 LINE CR1 1327 1423 -154 2040 113 10 22 chr20 63794030 63794341 -2873664 - AluSx SINE Alu -5 307 1 527 226 142 51 chr20 63794704 63795000 -2873005 + MLT1H LTR MaLR 23 345 -204 870 230 111 80 chr20 63795279 63795731 -2872274 + MLT1C LTR MaLR 1 467 0 279 214 0 0 chr20 63796165 63796235 -2871770 + (TG)n Simple_repeat Simple_repeat 1 70 0 2706 3 0 0 chr20 63796750 63797047 -2870958 - AluYa5 SINE Alu -14 297 1 386 251 3 69 chr20 63797097 63797323 -2870682 + G-rich Low_complexity Low_complexity 1 211 0 * 416 212 0 96 chr20 63797257 63797455 -2870550 + GA-rich Low_complexity Low_complexity 1 179 0 227 158 118 92 chr20 63798556 63798632 -2869373 - MLT1A1 LTR MaLR -171 194 117 284 231 83 0 chr20 63798705 63798813 -2869192 + MLT1A1 LTR MaLR 172 288 -77 309 158 12 0 chr20 63805041 63805119 -2862886 + MIR SINE MIR 103 181 -61 248 397 7 7 chr20 63805893 63806029 -2861976 + (TG)n Simple_repeat Simple_repeat 2 137 0 983 256 160 17 chr20 63806068 63806548 -2861457 + MER115 DNA AcHobo 96 644 -49 204 357 12 0 chr20 63806571 63806655 -2861350 + L2 LINE L2 3228 3312 -1 354 98 0 0 chr20 63810108 63810159 -2857846 + (T)n Simple_repeat Simple_repeat 1 51 0 297 239 0 0 chr20 63810948 63811065 -2856940 + G-rich Low_complexity Low_complexity 1 117 0 1945 114 24 13 chr20 63811466 63811764 -2856241 - AluSx SINE Alu -6 306 6 1129 65 0 0 chr20 63811764 63811903 -2856102 - AluSq/x SINE Alu -174 139 1 253 226 54 21 chr20 63812957 63813050 -2854955 - MIR SINE MIR -79 129 34 225 310 51 19 chr20 63814514 63814672 -2853333 + (CATG)n Simple_repeat Simple_repeat 2 164 0 331 355 14 28 chr20 63814742 63814976 -2853029 + (CGTG)n Simple_repeat Simple_repeat 1 230 0 379 252 42 17 chr20 63817044 63817163 -2850842 + MLT1K LTR MaLR 148 269 -319 1799 125 57 4 chr20 63817941 63818221 -2849784 + AluSx SINE Alu 1 295 -17 374 256 115 32 chr20 63818237 63818646 -2849359 + L1MC4a LINE L1 5219 5666 -455 207 272 0 35 chr20 63819456 63819570 -2848435 + (CA)n Simple_repeat Simple_repeat 1 110 0 2254 102 0 7 chr20 63820483 63820788 -2847217 - AluSg SINE Alu -7 303 1 308 325 93 0 chr20 63821055 63821206 -2846799 + L2 LINE L2 2894 3058 -255 634 333 13 22 chr20 63821290 63821605 -2846400 + MLT1J LTR MaLR 1 312 -199 343 298 213 5 chr20 63821879 63822067 -2845938 - MIR SINE MIR -27 235 9 304 303 97 0 chr20 63823300 63823445 -2844560 - MIR SINE MIR -81 181 23 282 261 178 22 chr20 63824016 63824246 -2843759 + LTR33 LTR ERVL 23 288 -233 235 218 161 0 chr20 63824345 63824432 -2843573 + MLT1C LTR MaLR 14 114 -391 875 200 24 24 chr20 63824459 63824624 -2843381 + FRAM SINE Alu 1 165 -1 572 284 152 16 chr20 63824630 63824873 -2843132 + MLT1C LTR MaLR 177 452 -15 930 298 61 8 chr20 63825181 63825544 -2842461 + L1MC4a LINE L1 5665 6046 -1762 2213 98 7 0 chr20 63825609 63825906 -2842099 - AluSx SINE Alu -13 299 1 1899 167 0 0 chr20 63828747 63829040 -2838965 + AluJb SINE Alu 1 293 -19 213 211 0 0 chr20 63831354 63831411 -2836594 + (ATG)n Simple_repeat Simple_repeat 3 59 0 456 337 30 20 chr20 63831424 63831626 -2836379 - MIR SINE MIR -12 250 47 650 322 96 15 chr20 63832041 63832376 -2835629 - L1ME1 LINE L1 -18 6148 5787 259 283 192 8 chr20 63832739 63832859 -2835146 + MIR SINE MIR 51 192 -70 606 273 14 37 chr20 63833379 63833657 -2834348 - MER4C LTR ERV1 -22 626 275 345 194 31 22 chr20 63833661 63833772 -2834233 - MER4A LTR ERV1 -349 116 1 302 208 57 16 chr20 63835338 63835478 -2832527 + L1MC4 LINE L1 7842 8042 0 767 300 58 26 chr20 63835657 63836004 -2832001 + MLT1J LTR MaLR 104 461 -50 334 354 69 45 chr20 63836551 63836797 -2831208 + L1M4 LINE L1 3326 3577 -2569 366 309 114 5 chr20 63836845 63837055 -2830950 + L1M4 LINE L1 3648 3880 -2266 333 157 83 65 chr20 63837534 63837642 -2830363 - L1ME3A LINE L1 -17 6153 6044 257 206 16 0 chr20 63837781 63837844 -2830161 - L1ME3A LINE L1 -60 6110 6047 558 266 148 20 chr20 63838060 63838493 -2829512 + MLT1D LTR MaLR 8 466 -1 265 264 116 23 chr20 63838493 63838622 -2829383 - L1ME3A LINE L1 -200 5970 5830 583 197 23 23 chr20 63838796 63838928 -2829077 + MLT1B LTR MaLR 1 132 -258 659 243 44 6 chr20 63841561 63841742 -2826263 + MER58A DNA MER1_type 37 224 0 236 286 13 13 chr20 63842126 63842203 -2825802 + LTR67 LTR ERVL 102 178 -379 336 230 102 7 chr20 63844049 63844160 -2823845 - MIR SINE MIR -5 203 80 2233 88 19 0 chr20 63844360 63844667 -2823338 - AluSq SINE Alu 0 313 1 180 0 0 0 chr20 63844782 63844802 -2823203 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 1098 112 12 0 chr20 63844888 63845049 -2822956 - FRAM SINE Alu -4 172 10 782 261 62 0 chr20 63845203 63845414 -2822591 + MER58A DNA MER1_type 1 224 0 264 227 0 0 chr20 63846681 63846747 -2821258 + CT-rich Low_complexity Low_complexity 2 67 0 375 261 245 0 chr20 63847027 63847211 -2820794 - MIR SINE MIR -25 237 9 2377 75 0 0 chr20 63848218 63848513 -2819492 + AluY SINE Alu 1 295 -16 1815 107 72 38 chr20 63848639 63848929 -2819076 - AluSg1 SINE Alu -9 300 1 278 345 58 7 chr20 63848932 63849071 -2818934 - MIR3 SINE MIR -59 149 4 201 384 92 24 chr20 63849110 63849316 -2818689 - MIR SINE MIR -12 250 31 836 133 17 22 chr20 63854076 63854257 -2813748 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 417 236 20 0 chr20 63854235 63854383 -2813622 + (CCCA)n Simple_repeat Simple_repeat 3 153 0 * 601 226 11 0 chr20 63854429 63854606 -2813399 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 718 193 11 0 chr20 63854635 63854811 -2813194 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 697 211 7 10 chr20 63854824 63855115 -2812890 + (TCCA)n Simple_repeat Simple_repeat 1 290 0 267 281 0 0 chr20 63855131 63855195 -2812810 + CT-rich Low_complexity Low_complexity 4 67 0 761 230 5 53 chr20 63855195 63855404 -2812601 + MLT1H LTR MaLR 351 549 0 213 320 40 109 chr20 63855484 63855759 -2812246 + L2 LINE L2 3014 3269 -3 897 248 14 0 chr20 63855888 63856098 -2811907 + MER58A DNA MER1_type 8 220 -4 264 300 62 0 chr20 63857162 63857242 -2810763 + L2 LINE L2 3187 3271 -1 815 136 43 0 chr20 63857416 63858110 -2809895 + (TCCA)n Simple_repeat Simple_repeat 1 724 0 826 113 47 5 chr20 63858148 63858559 -2809446 + (TCCA)n Simple_repeat Simple_repeat 1 428 0 894 69 46 17 chr20 63858583 63858758 -2809247 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 192 270 40 119 chr20 63859148 63859274 -2808731 - MIR SINE MIR -68 140 25 201 288 0 0 chr20 63860519 63860599 -2807406 + (TG)n Simple_repeat Simple_repeat 1 80 0 201 179 26 0 chr20 63860625 63860664 -2807341 + (TG)n Simple_repeat Simple_repeat 1 40 0 1705 278 65 0 chr20 63862325 63862897 -2805108 + L1MB5 LINE L1 5557 6165 -9 201 147 0 0 chr20 63864145 63864179 -2803826 + (TCTG)n Simple_repeat Simple_repeat 3 36 0 474 294 77 0 chr20 63864510 63864704 -2803301 - MER20 DNA MER1_type -5 214 6 252 328 174 12 chr20 63864709 63864968 -2803037 - L2 LINE L2 -118 3195 2895 227 308 67 8 chr20 63864988 63865108 -2802897 - L2 LINE L2 -546 2768 2642 407 288 137 37 chr20 63865270 63865621 -2802384 - Charlie8 DNA MER1_type -1947 470 85 577 277 212 11 chr20 63865913 63866267 -2801738 - MLT1C LTR MaLR -37 430 6 180 0 0 0 chr20 63872094 63872114 -2795891 + (TG)n Simple_repeat Simple_repeat 2 21 0 375 290 33 49 chr20 63874501 63874684 -2793321 - MIR3 SINE MIR -3 205 26 279 198 62 0 chr20 63875618 63875699 -2792306 + L2 LINE L2 2921 3006 -266 230 163 0 0 chr20 63876706 63876749 -2791256 + HAL1 LINE L1 1502 1544 -963 477 339 21 16 chr20 63876765 63876957 -2791048 + L1MDa LINE L1 1876 2068 -4472 243 0 0 0 chr20 63876985 63877012 -2790993 + (CA)n Simple_repeat Simple_repeat 2 28 0 278 217 9 94 chr20 63878432 63878538 -2789467 - MIR3 SINE MIR -13 195 99 784 259 93 0 chr20 63878589 63878794 -2789211 - MER58A DNA MER1_type 0 224 1 2026 147 3 0 chr20 63880477 63880784 -2787221 - AluSx SINE Alu -4 308 1 344 257 73 9 chr20 63881635 63881744 -2786261 + L1ME LINE L1 5563 5678 -443 216 270 34 67 chr20 63881793 63881882 -2786123 - L2 LINE L2 -12 3301 3216 327 316 57 10 chr20 63882054 63882263 -2785742 + MER89 LTR ERV1 1 219 -340 649 222 133 18 chr20 63883841 63884066 -2783939 - MLT1C LTR MaLR -163 304 54 207 341 123 15 chr20 63885772 63886033 -2781972 - L2 LINE L2 -70 3202 2914 230 119 0 24 chr20 63886466 63886508 -2781497 + MLT1L LTR MaLR 568 608 -7 354 333 65 23 chr20 63886535 63886751 -2781254 + MIR SINE MIR 9 233 -29 184 303 132 0 chr20 63887998 63888074 -2779931 - MIR SINE MIR -92 170 85 2320 269 36 11 chr20 63888308 63889473 -2778532 + L1MD2 LINE L1 4808 5997 -362 627 183 0 0 chr20 63889474 63889654 -2778351 + (CA)n Simple_repeat Simple_repeat 1 180 0 259 208 0 26 chr20 63889657 63889734 -2778271 + (CAGAGA)n Simple_repeat Simple_repeat 2 76 0 690 167 0 0 chr20 63889734 63889914 -2778091 + (CA)n Simple_repeat Simple_repeat 1 180 0 600 177 0 0 chr20 63889965 63890140 -2777865 + (CA)n Simple_repeat Simple_repeat 2 176 0 950 229 5 9 chr20 63890159 63890382 -2777623 + L1MD2 LINE L1 6135 6356 -3 250 305 0 12 chr20 63890941 63891023 -2776982 + MLT1K LTR MaLR 236 316 -272 473 278 46 0 chr20 63893976 63894127 -2773878 + MER53 DNA DNA 21 178 -11 234 316 13 13 chr20 63895418 63895497 -2772508 + MIR SINE MIR 80 158 -104 265 333 89 17 chr20 63896079 63896290 -2771715 - L2 LINE L2 0 3313 3005 618 297 26 5 chr20 63897699 63897887 -2770118 - MIR SINE MIR -6 256 64 1111 214 91 93 chr20 63898217 63898702 -2769303 + MLT1E2 LTR MaLR 143 626 0 1971 136 0 7 chr20 63899224 63899512 -2768493 + AluSx SINE Alu 1 288 -24 216 0 0 0 chr20 63899512 63899536 -2768469 + (CAATA)n Simple_repeat Simple_repeat 2 25 0 980 145 0 0 chr20 63899542 63899687 -2768318 + AluJb SINE Alu 163 307 -5 2363 169 31 5 chr20 63900048 63900463 -2767542 + MSTB LTR MaLR 1 426 0 405 136 7 65 chr20 63901377 63901532 -2766473 + (TCTCTG)n Simple_repeat Simple_repeat 6 151 0 313 322 41 27 chr20 63902015 63902161 -2765844 - L2 LINE L2 -5 3308 3161 227 326 82 14 chr20 63902349 63902496 -2765509 - MIR SINE MIR -36 172 16 449 263 88 29 chr20 63902944 63903115 -2764890 + MER5A DNA MER1_type 1 181 -8 543 366 87 46 chr20 63904238 63904344 -2763661 + L1M4 LINE L1 2679 2779 -3367 1692 136 23 45 chr20 63904344 63904573 -2763432 - AluJo SINE Alu -9 303 81 2760 19 0 0 chr20 63904573 63904883 -2763122 - AluYb8 SINE Alu -8 310 1 1692 136 23 45 chr20 63904883 63904963 -2763042 - AluJo SINE Alu -231 81 1 543 366 87 46 chr20 63904963 63905419 -2762586 + L1M4 LINE L1 2779 3264 -2882 203 308 0 0 chr20 63906271 63906323 -2761682 + (CACG)n Simple_repeat Simple_repeat 4 55 0 661 160 34 13 chr20 63908083 63908760 -2759245 + (CA)n Simple_repeat Simple_repeat 1 691 0 1955 112 19 56 chr20 63909200 63909522 -2758483 - AluSx SINE Alu -2 310 1 237 132 0 0 chr20 63909880 63909918 -2758087 + (CAGG)n Simple_repeat Simple_repeat 2 39 0 265 301 68 0 chr20 63910550 63910653 -2757352 - MIR SINE MIR -63 145 36 1773 173 3 0 chr20 63910851 63911140 -2756865 - AluJo SINE Alu -22 290 1 416 199 16 4 chr20 63912285 63912385 -2755620 - LTR16A1 LTR ERVL 0 457 376 1124 149 26 88 chr20 63912693 63912921 -2755084 + AluJo SINE Alu 7 220 -92 195 42 0 0 chr20 63912955 63912979 -2755026 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 180 234 39 52 chr20 63912984 63913061 -2754944 + L2 LINE L2 3108 3183 -89 356 331 39 0 chr20 63913906 63914084 -2753921 + MLT1K LTR MaLR 72 256 -332 268 224 122 20 chr20 63914820 63914918 -2753087 - MLT1K LTR MaLR -23 565 458 655 236 0 114 chr20 63915239 63915259 -2752746 - MIR SINE MIR -33 229 208 1988 138 52 35 chr20 63915259 63915628 -2752377 + THE1C LTR MaLR 1 375 0 655 236 0 114 chr20 63915628 63915853 -2752152 - MIR SINE MIR -54 208 12 287 291 103 0 chr20 63915879 63915996 -2752009 - MLT1K LTR MaLR -303 285 157 207 160 0 60 chr20 63917926 63917976 -2750029 + G-rich Low_complexity Low_complexity 2 48 0 1401 246 52 14 chr20 63918461 63918901 -2749104 + L1MB7 LINE L1 5561 6017 -167 1883 147 52 31 chr20 63918908 63919234 -2748771 + MER1B DNA MER1_type 4 336 -1 462 290 13 13 chr20 63919235 63919390 -2748615 - MIR SINE MIR -73 189 35 1735 254 55 85 chr20 63919498 63920618 -2747387 - L1MC5 LINE L1 -414 7547 6455 306 368 91 49 chr20 63920831 63921035 -2746970 - L1M2 LINE L1 -4773 2076 1851 465 19 0 0 chr20 63921035 63921089 -2746916 + (CA)n Simple_repeat Simple_repeat 2 55 0 306 368 91 49 chr20 63921089 63921213 -2746792 - L1M2 LINE L1 -4998 1851 1734 1384 297 67 31 chr20 63921575 63922304 -2745701 - L2 LINE L2 -244 3069 2312 712 305 34 4 chr20 63922326 63922559 -2745446 + MIR SINE MIR 8 247 -15 1675 168 28 7 chr20 63922635 63922926 -2745079 - AluSx SINE Alu -15 297 1 449 323 103 22 chr20 63924368 63924600 -2743405 + MIR SINE MIR 6 256 -6 556 235 6 6 chr20 63924623 63924802 -2743203 + (CAT)n Simple_repeat Simple_repeat 1 179 0 * 827 180 4 0 chr20 63924773 63925012 -2742993 + (CACCAT)n Simple_repeat Simple_repeat 1 240 0 569 264 110 48 chr20 63925012 63925285 -2742720 + MLT2C1 LTR ERVL 108 397 0 308 282 35 35 chr20 63926670 63926895 -2741110 + (CTGGGG)n Simple_repeat Simple_repeat 1 225 0 1757 167 16 19 chr20 63929518 63929829 -2738176 - AluJo SINE Alu -2 310 1 1320 101 11 5 chr20 63930017 63930206 -2737799 + AluSg/x SINE Alu 121 310 0 199 274 153 24 chr20 63930536 63930660 -2737345 - L2 LINE L2 -60 3212 3073 308 85 85 0 chr20 63930664 63930723 -2737282 + FAM SINE Alu 116 179 0 305 200 80 0 chr20 63933884 63933959 -2734046 + MIR SINE MIR 46 126 -136 333 256 131 29 chr20 63934666 63934803 -2733202 + MIR SINE MIR 26 176 -86 424 253 134 1 chr20 63935732 63936084 -2731921 + LTR16A1 LTR ERVL 8 445 -12 2054 111 38 0 chr20 63936252 63936541 -2731464 + AluSx SINE Alu 1 300 -12 252 0 0 0 chr20 63939854 63939882 -2728123 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 263 313 0 0 chr20 63941634 63941701 -2726304 + (TG)n Simple_repeat Simple_repeat 2 68 0 689 324 117 29 chr20 63942908 63943423 -2724582 + MLT1K LTR MaLR 23 582 -6 369 355 27 27 chr20 63945849 63946035 -2721970 + MIR SINE MIR 6 191 -71 1290 235 37 45 chr20 63946257 63946742 -2721263 + MLT1D LTR MaLR 25 505 0 263 241 30 54 chr20 63947590 63947728 -2720277 + MIR SINE MIR 19 151 -57 22 35 0 0 chr20 63950021 63950050 -2717955 + GC_rich Low_complexity Low_complexity 1 29 0 1702 141 28 10 chr20 63950415 63950706 -2717299 - AluJo SINE Alu -8 304 9 344 362 35 0 chr20 63951915 63952056 -2715949 + MIR SINE MIR 25 170 -92 339 85 0 0 chr20 63952350 63952397 -2715608 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 244 342 52 67 chr20 63952581 63952911 -2715094 + L2 LINE L2 2943 3267 -5 786 211 0 0 chr20 63953086 63953261 -2714744 + (CAT)n Simple_repeat Simple_repeat 1 175 0 795 283 111 6 chr20 63953806 63954159 -2713846 + MLT1J LTR MaLR 91 480 -31 1071 192 264 5 chr20 63956911 63957339 -2710666 + MLT1H LTR MaLR 11 549 0 260 313 173 6 chr20 63957370 63957443 -2710562 - MIR SINE MIR -7 255 196 2074 144 0 0 chr20 63957443 63957749 -2710256 - AluSx SINE Alu -1 311 6 260 313 173 6 chr20 63957749 63957854 -2710151 - MIR SINE MIR -66 196 47 392 228 44 15 chr20 63959428 63959564 -2708441 - L1MC4 LINE L1 0 8042 7903 1104 271 121 30 chr20 63959687 63959840 -2708165 - L1MC4 LINE L1 -104 7938 7800 2036 121 3 10 chr20 63959840 63960138 -2707867 - AluSx SINE Alu -16 296 1 1104 271 121 30 chr20 63960138 63960555 -2707450 - L1MC4 LINE L1 -242 7800 7316 21 0 0 0 chr20 63960674 63960695 -2707310 + AT_rich Low_complexity Low_complexity 1 21 0 617 165 43 0 chr20 63960704 63960819 -2707186 + FLAM_A SINE Alu 23 142 0 1652 152 0 102 chr20 63960828 63960975 -2707030 + AluSx SINE Alu 1 97 -215 2279 79 33 0 chr20 63960975 63961278 -2706727 + AluSp SINE Alu 1 313 0 1652 152 0 102 chr20 63961278 63961465 -2706540 + AluSx SINE Alu 97 301 -11 787 163 8 0 chr20 63961481 63961604 -2706401 - FLAM_C SINE Alu -9 124 1 1955 106 0 0 chr20 63962413 63962677 -2705328 + AluSc SINE Alu 36 299 -10 1734 77 5 0 chr20 63962744 63962965 -2705040 + AluSp SINE Alu 1 222 -91 236 348 9 9 chr20 63963209 63963324 -2704681 + C-rich Low_complexity Low_complexity 2 116 0 487 297 89 30 chr20 63963581 63963951 -2704054 - L1ME4a LINE L1 0 6121 5730 294 271 66 0 chr20 63964010 63964132 -2703873 - L1ME4a LINE L1 -93 6028 5899 354 257 59 0 chr20 63964295 63964396 -2703609 - L2 LINE L2 -1106 2208 2102 2493 54 0 0 chr20 63964399 63964696 -2703309 + AluSx SINE Alu 1 297 -15 441 115 0 0 chr20 63964696 63964757 -2703248 + Alu SINE Alu 234 294 -16 1545 108 4 26 chr20 63964757 63964989 -2703016 + AluSg/x SINE Alu 80 306 -4 2435 64 0 0 chr20 63965569 63965865 -2702140 + AluSc SINE Alu 5 300 -9 284 231 83 0 chr20 63971543 63971651 -2696354 - MLT1A1 LTR MaLR -77 288 172 227 158 118 92 chr20 63971724 63971800 -2696205 + MLT1A1 LTR MaLR 117 194 -171 416 212 0 96 chr20 63972901 63973099 -2694906 + CT-rich Low_complexity Low_complexity 1 179 0 386 251 3 69 chr20 63973033 63973259 -2694746 + C-rich Low_complexity Low_complexity 1 211 0 * 279 214 0 0 chr20 63973816 63973886 -2694119 + (CA)n Simple_repeat Simple_repeat 1 70 0 761 223 118 85 chr20 63974320 63974710 -2693295 - MLT1C LTR MaLR 0 467 65 433 243 128 37 chr20 63975048 63975344 -2692661 - MLT1H LTR MaLR -204 345 23 2070 113 10 22 chr20 63975707 63976018 -2691987 + AluSx SINE Alu 1 307 -5 231 364 10 30 chr20 63976331 63976430 -2691575 - L3 LINE CR1 -154 1423 1327 848 180 12 0 chr20 63976835 63977002 -2691003 + L1 LINE L1 4123 4291 -1855 579 212 0 0 chr20 63977103 63977254 -2690751 + (CAT)n Simple_repeat Simple_repeat 1 151 0 874 284 97 5 chr20 63977615 63978037 -2689968 + LTR16C LTR ERVL 1 461 -30 2299 82 0 16 chr20 63978098 63978402 -2689603 - AluY SINE Alu -12 299 1 2371 77 0 0 chr20 63978402 63978699 -2689306 - AluSg1 SINE Alu -12 297 1 662 192 182 44 chr20 63978784 63978987 -2689018 - MER106A DNA MER1_type -3 233 3 2109 119 3 7 chr20 63978994 63979304 -2688701 + AluSq SINE Alu 1 309 -4 2101 121 0 3 chr20 63979310 63979600 -2688405 + AluSg SINE Alu 1 289 -21 406 345 108 29 chr20 63979999 63980758 -2687247 + L2 LINE L2 2441 3267 -46 796 192 9 0 chr20 63981291 63982215 -2685790 + (TGGA)n Simple_repeat Simple_repeat 1 932 0 508 277 180 0 chr20 63984164 63984531 -2683474 + L2 LINE L2 2637 3070 -243 2699 108 11 3 chr20 63984681 63985053 -2682952 + THE1C LTR MaLR 1 375 0 611 94 10 0 chr20 63985078 63985174 -2682831 + (TGGA)n Simple_repeat Simple_repeat 1 97 0 280 346 76 44 chr20 63986826 63987141 -2680864 - L2 LINE L2 0 3313 2989 2100 129 0 3 chr20 63989162 63989457 -2678548 - AluSx SINE Alu -18 294 1 1685 296 64 55 chr20 63989493 63989932 -2678073 - L1ME LINE L1 -4345 1916 1482 2149 116 0 7 chr20 63989932 63990234 -2677771 - AluSx SINE Alu -12 300 1 1685 296 64 55 chr20 63990234 63991643 -2676362 - L1ME LINE L1 -4779 1482 11 192 233 50 17 chr20 63993322 63993382 -2674623 + L2 LINE L2 3194 3255 -17 268 279 6 23 chr20 63994239 63994411 -2673594 + (TG)n Simple_repeat Simple_repeat 2 170 0 375 283 0 0 chr20 63994440 63994617 -2673388 + (TG)n Simple_repeat Simple_repeat 2 178 0 204 97 0 0 chr20 63994984 63995015 -2672990 + (CTCA)n Simple_repeat Simple_repeat 1 31 0 280 363 170 0 chr20 63995015 63995197 -2672808 - L2 LINE L2 -13 3300 3088 567 259 44 0 chr20 63995319 63995477 -2672528 + MLT1J2 LTR MaLR 4 168 -282 268 228 109 10 chr20 63995490 63995591 -2672414 + MLT1J1 LTR MaLR 284 394 -52 847 210 113 0 chr20 63996640 63996835 -2671170 + MER58A DNA MER1_type 6 222 -2 4485 88 12 3 chr20 63997141 63997745 -2670260 + L1PA11 LINE L1 5563 6171 -3 726 279 113 31 chr20 63999436 63999905 -2668100 + L1ME4a LINE L1 4942 5467 -756 262 330 27 58 chr20 64000009 64000197 -2667808 + MIR SINE MIR 49 230 -32 485 323 82 22 chr20 64000281 64000612 -2667393 + L1ME4a LINE L1 5577 5887 -234 2117 131 7 0 chr20 64000612 64000917 -2667088 - AluSx SINE Alu -5 307 1 485 323 82 22 chr20 64000917 64000951 -2667054 + L1ME4a LINE L1 5887 5918 -203 2224 116 3 0 chr20 64000951 64001261 -2666744 + AluSq SINE Alu 3 313 0 485 323 82 22 chr20 64001261 64001309 -2666696 + L1ME4a LINE L1 5918 6016 -105 2465 65 0 0 chr20 64001347 64001654 -2666351 - AluY SINE Alu -1 310 4 371 200 126 11 chr20 64002910 64003005 -2665000 + MER5A DNA MER1_type 18 123 -66 363 324 46 12 chr20 64003837 64004010 -2663995 + (CATG)n Simple_repeat Simple_repeat 1 179 0 195 69 0 0 chr20 64004039 64004068 -2663937 + (TG)n Simple_repeat Simple_repeat 2 30 0 188 353 16 42 chr20 64005379 64005569 -2662436 - L2 LINE L2 -211 3061 2877 187 346 109 0 chr20 64005641 64005742 -2662263 + MIR SINE MIR 100 211 -51 257 312 75 11 chr20 64005951 64006044 -2661961 - MIR3 SINE MIR -53 155 57 228 220 44 22 chr20 64006285 64006376 -2661629 + MLT1K LTR MaLR 141 233 -355 195 42 0 0 chr20 64006665 64006689 -2661316 + (TCC)n Simple_repeat Simple_repeat 1 24 0 194 191 21 43 chr20 64008678 64008725 -2659280 + MER5A DNA MER1_type 55 100 -89 207 134 0 90 chr20 64010294 64010361 -2657644 + (CTGTG)n Simple_repeat Simple_repeat 2 62 0 459 235 108 0 chr20 64012326 64012492 -2655513 - MER20 DNA MER1_type -3 216 33 26 50 0 0 chr20 64012574 64012614 -2655391 + AT_rich Low_complexity Low_complexity 1 40 0 475 367 0 6 chr20 64013168 64013348 -2654657 + (CA)n Simple_repeat Simple_repeat 1 179 0 425 353 79 29 chr20 64013944 64014287 -2653718 + L2 LINE L2 2922 3281 -32 243 139 35 35 chr20 64016442 64016528 -2651477 + (TG)n Simple_repeat Simple_repeat 1 86 0 203 156 52 21 chr20 64016611 64016707 -2651298 + (TG)n Simple_repeat Simple_repeat 1 99 0 498 105 64 23 chr20 64016727 64016899 -2651106 + (TG)n Simple_repeat Simple_repeat 1 179 0 227 88 53 18 chr20 64016930 64016987 -2651018 + (TG)n Simple_repeat Simple_repeat 1 59 0 2743 80 8 0 chr20 64016991 64017343 -2650662 + THE1A LTR MaLR 1 355 0 325 137 68 29 chr20 64017354 64017639 -2650366 + (TG)n Simple_repeat Simple_repeat 1 296 0 1489 202 83 2 chr20 64018015 64018411 -2649594 - MLT1C LTR MaLR -34 433 6 655 334 70 3 chr20 64019515 64019844 -2648161 - L1ME3 LINE L1 -296 6260 5910 607 291 93 19 chr20 64019836 64019905 -2648100 - L1ME3 LINE L1 -914 5626 5564 * 2173 119 7 0 chr20 64019905 64020208 -2647797 - AluSx SINE Alu -6 306 2 607 291 93 19 chr20 64020208 64020461 -2647544 - L1ME3 LINE L1 -976 5564 5280 467 234 51 31 chr20 64020473 64020646 -2647359 - MER58 DNA MER1_type -1 2419 36 648 219 19 12 chr20 64020895 64021055 -2646950 + MER20 DNA MER1_type 1 161 -58 850 252 127 48 chr20 64021086 64021622 -2646383 - L1ME3 LINE L1 -1447 5093 4516 1916 294 85 21 chr20 64021661 64022181 -2645824 - L1ME3 LINE L1 -2517 4023 3537 1993 147 7 0 chr20 64022181 64022480 -2645525 - AluSx SINE Alu -11 301 1 1916 294 85 21 chr20 64022480 64023307 -2644698 - L1ME3 LINE L1 -3003 3537 2591 425 347 90 43 chr20 64023338 64023763 -2644242 - L1ME3 LINE L1 -4046 2494 2038 464 284 78 69 chr20 64023766 64023864 -2644141 - L1ME3 LINE L1 -4574 1973 1877 1930 111 0 0 chr20 64023864 64024125 -2643880 + AluSg SINE Alu 37 297 -13 464 284 78 69 chr20 64024125 64024726 -2643279 - L1ME3 LINE L1 -4670 1877 1255 2165 88 10 26 chr20 64024792 64025099 -2642906 - AluY SINE Alu -9 302 1 180 331 88 38 chr20 64025480 64025640 -2642365 - MIR SINE MIR -29 233 66 210 303 202 0 chr20 64025772 64025861 -2642144 + MIR SINE MIR 119 225 -37 713 211 0 4 chr20 64027650 64027903 -2640102 + CT-rich Low_complexity Low_complexity 1 251 0 193 183 33 0 chr20 64027917 64027977 -2640028 + CT-rich Low_complexity Low_complexity 1 62 0 485 252 126 13 chr20 64028136 64028295 -2639710 - MER45A DNA AcHobo -1 177 1 266 114 0 0 chr20 64030421 64030465 -2637540 + Alu SINE Alu 1 44 -256 2348 57 0 10 chr20 64030465 64030761 -2637244 + AluY SINE Alu 1 293 -18 2086 126 7 0 chr20 64031027 64031329 -2636676 - AluSx SINE Alu -7 305 2 245 372 115 5 chr20 64034349 64034540 -2633465 + MIR SINE MIR 50 261 -1 199 296 56 0 chr20 64034637 64034708 -2633297 - L2 LINE L2 -2 3270 3196 397 167 0 22 chr20 64035578 64035668 -2632337 + CT-rich Low_complexity Low_complexity 3 90 0 257 346 93 42 chr20 64035713 64036068 -2631937 - L2 LINE L2 -85 3187 2815 555 221 0 0 chr20 64036882 64036986 -2631019 + L1MB5 LINE L1 6071 6174 0 277 246 29 0 chr20 64037543 64037612 -2630393 - MIR3 SINE MIR -15 193 123 453 181 0 0 chr20 64038516 64038610 -2629395 + CT-rich Low_complexity Low_complexity 1 94 0 397 275 53 6 chr20 64039661 64039832 -2628173 - L2 LINE L2 -299 3014 2836 188 259 56 19 chr20 64041143 64041197 -2626808 + L2 LINE L2 2225 2280 -1034 204 364 16 39 chr20 64041602 64041731 -2626274 + L2 LINE L2 3144 3269 -3 1250 209 104 82 chr20 64041770 64042272 -2625733 + L1MC2 LINE L1 5821 6333 -11 302 349 62 21 chr20 64043556 64043748 -2624257 - MIR SINE MIR -27 235 36 1991 179 39 55 chr20 64044331 64044767 -2623238 + MSTB1 LTR MaLR 1 429 -3 357 294 0 0 chr20 64044802 64045155 -2622850 + (ATG)n Simple_repeat Simple_repeat 1 353 0 356 182 0 88 chr20 64045161 64045440 -2622565 + (ATGGTG)n Simple_repeat Simple_repeat 1 254 0 454 193 0 73 chr20 64045500 64045692 -2622313 + (ATGGTG)n Simple_repeat Simple_repeat 3 180 0 306 356 30 0 chr20 64045702 64045834 -2622171 - MIR SINE MIR -15 247 112 236 206 16 16 chr20 64046461 64046524 -2621481 + C-rich Low_complexity Low_complexity 5 67 0 1724 178 3 16 chr20 64047121 64047430 -2620575 - AluJo SINE Alu -7 305 1 232 160 160 0 chr20 64049377 64049427 -2618578 - MER103 DNA DNA -42 124 67 397 309 77 58 chr20 64049502 64049864 -2618141 - MLT1I LTR MaLR 0 409 41 245 195 49 12 chr20 64051282 64051364 -2616641 - LTR65 LTR ERV1 0 669 585 217 316 34 17 chr20 64051630 64051807 -2616198 + (CACTC)n Simple_repeat Simple_repeat 1 180 0 1965 131 3 16 chr20 64054474 64054752 -2613253 + AluSx SINE Alu 4 279 -33 213 65 0 0 chr20 64054752 64054783 -2613222 + (CAAA)n Simple_repeat Simple_repeat 1 31 0 1965 131 3 16 chr20 64054783 64054816 -2613189 + AluSx SINE Alu 279 311 -1 1987 136 7 0 chr20 64055324 64055625 -2612380 - AluSx SINE Alu -3 309 7 884 202 226 0 chr20 64056627 64056919 -2611086 + MSTD LTR MaLR 1 358 -38 4988 129 30 3 chr20 64056919 64057830 -2610175 + L1PB3 LINE L1 5219 6152 -2 2305 71 0 0 chr20 64057918 64058243 -2609762 + AluY SINE Alu 6 311 0 252 233 33 0 chr20 64059671 64059731 -2608274 + G-rich Low_complexity Low_complexity 3 64 0 218 278 151 8 chr20 64060354 64060480 -2607525 + L2 LINE L2 2969 3112 -201 1457 218 141 0 chr20 64060525 64060868 -2607137 + MLT1D LTR MaLR 4 424 -81 2281 124 7 79 chr20 64060868 64061272 -2606733 - THE1C LTR MaLR 0 375 1 1457 218 141 0 chr20 64061272 64061368 -2606637 + MLT1D LTR MaLR 424 505 0 292 281 124 33 chr20 64061369 64061490 -2606515 + L2 LINE L2 3141 3272 0 237 261 58 0 chr20 64061950 64062019 -2605986 - MIR SINE MIR -78 130 58 2006 123 7 3 chr20 64062684 64062985 -2605020 + AluSx SINE Alu 2 303 -9 405 241 82 20 chr20 64063294 64063503 -2604502 - MER5C DNA MER1_type -17 307 6 1210 170 8 38 chr20 64064403 64064638 -2603367 + MER1B DNA MER1_type 110 337 -2 184 350 68 0 chr20 64064956 64065073 -2602932 - L2 LINE L2 -1 3271 3147 641 259 85 10 chr20 64067336 64067537 -2600468 + MER20 DNA MER1_type 4 219 0 250 253 0 60 chr20 64067553 64067636 -2600369 + Charlie8 DNA MER1_type 104 181 -2236 229 381 25 0 chr20 64069144 64069262 -2598743 + L2 LINE L2 3183 3303 -10 1041 224 30 29 chr20 64070896 64071325 -2596680 + MLT1C LTR MaLR 1 467 0 423 217 204 0 chr20 64073464 64073616 -2594389 + MER20 DNA MER1_type 27 209 -10 188 276 41 81 chr20 64074200 64074323 -2593682 - MIR3 SINE MIR -87 121 4 2190 88 0 36 chr20 64074634 64074941 -2593064 - AluSg SINE Alu -14 296 1 806 279 87 14 chr20 64075165 64075534 -2592471 - MLT1D LTR MaLR -105 400 5 1985 124 40 3 chr20 64078079 64078378 -2589627 + AluSx SINE Alu 3 312 0 189 94 0 0 chr20 64079406 64079438 -2588567 + (A)n Simple_repeat Simple_repeat 1 32 0 870 157 0 0 chr20 64079953 64080177 -2587828 + (CA)n Simple_repeat Simple_repeat 1 224 0 312 341 47 59 chr20 64080312 64080405 -2587600 - L1MC4 LINE L1 -1287 6755 6663 1627 242 26 0 chr20 64080405 64080744 -2587261 + MER7A DNA MER2_type 1 346 0 312 341 47 59 chr20 64080744 64080820 -2587185 - L1MC4 LINE L1 -1379 6663 6588 657 217 0 0 chr20 64080825 64081005 -2587000 + (CA)n Simple_repeat Simple_repeat 1 180 0 203 316 0 53 chr20 64082236 64082407 -2585598 + (CACCC)n Simple_repeat Simple_repeat 3 164 0 405 273 0 0 chr20 64085460 64085610 -2582395 + (CA)n Simple_repeat Simple_repeat 2 151 0 528 281 0 0 chr20 64085640 64085923 -2582082 + (CA)n Simple_repeat Simple_repeat 1 283 0 739 221 60 115 chr20 64087028 64087377 -2580628 + L1MB7 LINE L1 5846 6175 -9 182 250 0 12 chr20 64089628 64089712 -2578293 + CT-rich Low_complexity Low_complexity 2 84 0 777 153 11 6 chr20 64089727 64089904 -2578101 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 285 156 0 0 chr20 64089912 64089957 -2578048 + CT-rich Low_complexity Low_complexity 4 48 0 640 210 12 0 chr20 64089960 64090127 -2577878 + (TCCA)n Simple_repeat Simple_repeat 4 172 0 523 237 130 12 chr20 64092789 64092958 -2575047 + MER5A DNA MER1_type 1 189 0 706 241 170 18 chr20 64093304 64093703 -2574302 + MLT1C LTR MaLR 7 466 -1 476 96 32 11 chr20 64093928 64094022 -2573983 + (TCCA)n Simple_repeat Simple_repeat 4 99 0 218 175 50 0 chr20 64094057 64094137 -2573868 + (TCCA)n Simple_repeat Simple_repeat 3 86 0 405 130 74 9 chr20 64094195 64094426 -2573579 + (TCTA)n Simple_repeat Simple_repeat 1 246 0 504 218 35 0 chr20 64094427 64094601 -2573404 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 375 294 63 53 chr20 64095135 64095599 -2572406 + L2 LINE L2 2733 3231 -82 824 249 14 5 chr20 64097209 64097426 -2570579 - MER58A DNA MER1_type 0 224 6 713 254 39 19 chr20 64097452 64097712 -2570293 + MER33 DNA MER1_type 60 324 0 773 235 83 60 chr20 64099014 64099363 -2568642 - MLT1D LTR MaLR -30 475 119 550 222 12 0 chr20 64099947 64100114 -2567891 + (TCCA)n Simple_repeat Simple_repeat 4 172 0 776 166 21 3 chr20 64100151 64100494 -2567511 + (TCCA)n Simple_repeat Simple_repeat 1 349 0 820 144 29 0 chr20 64100511 64100684 -2567321 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 222 118 0 0 chr20 64100711 64100745 -2567260 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 1890 165 0 13 chr20 64100746 64101049 -2566956 - AluJo SINE Alu -13 299 1 553 181 14 0 chr20 64101061 64101199 -2566806 + (TCCA)n Simple_repeat Simple_repeat 2 141 0 948 294 105 22 chr20 64101684 64102092 -2565913 + MLT1K LTR MaLR 37 478 -110 218 366 74 20 chr20 64102871 64103073 -2564932 + L2 LINE L2 2851 3063 -250 285 299 10 21 chr20 64103539 64103636 -2564369 + MIR SINE MIR 40 135 -73 402 294 63 0 chr20 64104767 64104915 -2563090 + MIR SINE MIR 30 184 -61 188 321 5 83 chr20 64108693 64108886 -2559119 + L2 LINE L2 2873 3050 -263 282 295 115 0 chr20 64110254 64110376 -2557629 - L1MD1 LINE L1 -1 6241 6106 198 0 0 0 chr20 64110766 64110788 -2557217 + (A)n Simple_repeat Simple_repeat 1 22 0 735 211 99 34 chr20 64112848 64113142 -2554863 - L1MCa LINE L1 -4051 2375 2063 182 259 121 0 chr20 64113223 64113281 -2554724 + MER5A DNA MER1_type 4 68 -121 303 349 0 6 chr20 64115770 64115942 -2552063 + (CCCA)n Simple_repeat Simple_repeat 3 173 0 293 325 0 0 chr20 64115877 64116046 -2551959 + (CACCC)n Simple_repeat Simple_repeat 4 172 0 * 195 194 215 54 chr20 64116465 64116558 -2551447 + L2 LINE L2 3204 3311 -2 210 128 0 0 chr20 64116858 64116897 -2551108 + (TG)n Simple_repeat Simple_repeat 2 40 0 209 270 27 14 chr20 64117070 64117144 -2550861 + (CATA)n Simple_repeat Simple_repeat 2 76 0 10585 25 3 105 chr20 64117803 64119341 -2548664 + SVA Other Other 20 1404 0 553 296 111 36 chr20 64119576 64120110 -2547895 + L1ME4a LINE L1 5536 6109 -12 198 410 0 0 chr20 64121618 64121701 -2546304 + L2 LINE L2 3169 3251 -21 229 267 129 40 chr20 64121867 64121968 -2546037 - L2 LINE L2 -3 3269 3160 398 300 38 57 chr20 64121981 64122191 -2545814 - L2 LINE L2 -477 2837 2632 405 277 44 29 chr20 64123406 64123543 -2544462 - MIR SINE MIR -33 229 91 463 43 43 0 chr20 64124664 64124733 -2543272 + (GGGAGA)n Simple_repeat Simple_repeat 5 76 0 420 270 32 27 chr20 64125671 64125834 -2542171 - MIR SINE MIR -37 171 9 572 313 25 33 chr20 64126372 64126612 -2541393 + MIR SINE MIR 23 260 -2 1779 166 7 17 chr20 64126613 64126914 -2541091 - AluJo SINE Alu -14 298 1 280 286 9 38 chr20 64126920 64127025 -2540980 - MIR SINE MIR -120 142 41 402 185 101 107 chr20 64127104 64127282 -2540723 + MLT1A2 LTR MaLR 30 217 -157 1122 231 196 35 chr20 64127974 64128372 -2539633 + MER31B LTR ERV1 1 462 -4 1895 177 100 30 chr20 64128762 64128839 -2539166 + MLT1D LTR MaLR 1 71 -434 1484 217 111 30 chr20 64128839 64129235 -2538770 + MSTC LTR MaLR 1 428 0 1895 177 100 30 chr20 64129235 64129625 -2538380 + MLT1D LTR MaLR 71 501 -4 244 355 70 30 chr20 64129655 64129855 -2538150 + L2 LINE L2 2689 2896 -418 808 191 191 30 chr20 64129961 64130196 -2537809 + ORSL DNA AcHobo 1 273 -2 305 294 99 78 chr20 64130311 64130644 -2537361 - L1M2 LINE L1 -5495 1354 1015 2167 108 0 31 chr20 64134197 64134520 -2533485 - AluSq SINE Alu 0 313 1 230 191 71 60 chr20 64135049 64135133 -2532872 + L1MD1 LINE L1 6150 6234 -8 2417 244 55 4 chr20 64136909 64137613 -2530392 + L1MB3 LINE L1 5444 6183 0 248 299 20 75 chr20 64138112 64138259 -2529746 - MIR SINE MIR -61 201 63 396 375 20 0 chr20 64138454 64138606 -2529399 - MIR SINE MIR -15 247 93 762 199 0 6 chr20 64138691 64139029 -2528976 + (TGGA)n Simple_repeat Simple_repeat 1 335 0 980 168 4 0 chr20 64139052 64139305 -2528700 + (TGGA)n Simple_repeat Simple_repeat 1 254 0 246 219 0 0 chr20 64139356 64139420 -2528585 + (TGGG)n Simple_repeat Simple_repeat 1 64 0 358 313 11 28 chr20 64139483 64139662 -2528343 + (TGGG)n Simple_repeat Simple_repeat 2 177 0 1939 133 13 17 chr20 64140597 64140898 -2527107 - AluSx SINE Alu -12 300 1 200 219 156 31 chr20 64141217 64141313 -2526692 + L2 LINE L2 3004 3111 -202 22 0 0 0 chr20 64142848 64142870 -2525135 + AT_rich Low_complexity Low_complexity 1 22 0 189 364 66 0 chr20 64143269 64143390 -2524615 - L2 LINE L2 -3 3269 3141 234 0 0 0 chr20 64143804 64143830 -2524175 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 479 204 56 14 chr20 64144704 64144846 -2523159 + MER20 DNA MER1_type 18 165 -54 364 291 27 0 chr20 64146088 64146198 -2521807 + L2 LINE L2 3185 3297 -16 194 161 0 0 chr20 64146303 64146334 -2521671 - MIR SINE MIR -74 188 158 329 370 20 0 chr20 64148112 64148258 -2519747 - MIR SINE MIR -74 188 40 991 209 80 0 chr20 64149393 64149594 -2518411 + MER20 DNA MER1_type 1 217 -2 194 83 56 0 chr20 64151490 64151526 -2516479 + (CAAA)n Simple_repeat Simple_repeat 1 38 0 26 50 0 0 chr20 64151577 64151617 -2516388 + AT_rich Low_complexity Low_complexity 1 40 0 572 150 46 31 chr20 64151670 64151723 -2516282 + (TCTA)n Simple_repeat Simple_repeat 1 52 -236 189 0 0 0 chr20 64151723 64151744 -2516261 + (TATG)n Simple_repeat Simple_repeat 3 23 0 572 150 46 31 chr20 64151744 64151954 -2516051 + (TCTA)n Simple_repeat Simple_repeat 52 288 0 446 212 20 14 chr20 64151958 64152104 -2515901 + (TCCA)n Simple_repeat Simple_repeat 1 147 0 189 0 0 0 chr20 64152997 64153018 -2514987 + (CTGGGG)n Simple_repeat Simple_repeat 5 25 0 688 277 37 0 chr20 64153848 64154036 -2513969 + MER72 LTR ERV1 2 196 -526 2383 103 39 28 chr20 64154106 64154466 -2513539 - THE1B LTR MaLR 0 364 1 942 253 17 38 chr20 64154471 64154763 -2513242 + MER72 LTR ERV1 242 527 -195 504 211 28 0 chr20 64154797 64154906 -2513099 + MER72 LTR ERV1 611 722 0 309 324 84 28 chr20 64154906 64155119 -2512886 - L2 LINE L2 -4 3309 3085 2134 120 3 0 chr20 64156837 64157146 -2510859 + AluSx SINE Alu 1 310 -2 1106 252 254 25 chr20 64157574 64158212 -2509793 - MER21B LTR ERV1 -79 784 1 239 308 75 23 chr20 64159416 64159549 -2508456 + L1M4 LINE L1 4958 5097 -1049 1171 208 11 4 chr20 64159888 64160167 -2507838 + L1MA4 LINE L1 6014 6294 -6 839 333 16 40 chr20 64160285 64160708 -2507297 + L1M3a LINE L1 1542 1954 -5532 638 212 84 59 chr20 64160843 64161046 -2506959 + MER21B LTR ERV1 21 228 -635 225 0 0 0 chr20 64161052 64161077 -2506928 + (CTGGGG)n Simple_repeat Simple_repeat 4 28 0 545 287 154 2 chr20 64161397 64161588 -2506417 + L1M3a LINE L1 1897 2058 -5431 4025 197 18 18 chr20 64161588 64162407 -2505598 + L1MA4 LINE L1 5482 6300 0 545 287 154 2 chr20 64162407 64162420 -2505585 + L1M3a LINE L1 2058 2445 -5044 665 275 58 14 chr20 64165801 64166008 -2501997 + MIR SINE MIR 28 243 -19 633 201 0 0 chr20 64166606 64166934 -2501071 + GA-rich Low_complexity Low_complexity 1 328 0 242 319 0 0 chr20 64168262 64168334 -2499671 + (TG)n Simple_repeat Simple_repeat 2 73 0 360 257 64 21 chr20 64168462 64168602 -2499403 + L2 LINE L2 2965 3110 -162 205 331 101 22 chr20 64168947 64169125 -2498880 + L2 LINE L2 3104 3295 -18 263 330 61 17 chr20 64169137 64169252 -2498753 + L2 LINE L2 3171 3290 -23 234 0 0 0 chr20 64169538 64169564 -2498441 + (T)n Simple_repeat Simple_repeat 1 26 0 2163 160 98 0 chr20 64170857 64171244 -2496761 + MSTB LTR MaLR 2 426 0 933 196 26 9 chr20 64171356 64171637 -2496368 - MER2 DNA MER2_type 0 345 23 188 355 118 28 chr20 64171673 64171884 -2496121 - MIR SINE MIR -19 243 14 1099 282 121 15 chr20 64174989 64175443 -2492562 + Charlie4a DNA MER1_type 1 502 -6 205 224 41 0 chr20 64175568 64175617 -2492388 + L2 LINE L2 3217 3267 -46 209 297 68 0 chr20 64177248 64177322 -2490683 + L2 LINE L2 3235 3313 0 228 250 12 38 chr20 64177980 64178060 -2489945 + C-rich Low_complexity Low_complexity 1 78 0 443 265 6 50 chr20 64178071 64178252 -2489753 + C-rich Low_complexity Low_complexity 3 175 0 763 225 12 0 chr20 64178524 64178693 -2489312 + L1M4b LINE L1 11 181 -6678 * 1333 244 14 22 chr20 64178683 64179040 -2488965 + L1MB7 LINE L1 5429 5782 -396 1012 231 71 26 chr20 64179049 64179429 -2488576 - MLT1D LTR MaLR 0 505 1 1066 213 71 61 chr20 64179429 64179823 -2488182 + L1MB7 LINE L1 5787 6184 0 3925 249 45 23 chr20 64179883 64181048 -2486957 + Charlie1 DNA MER1_type 1488 2678 -83 511 29 0 0 chr20 64182427 64182495 -2485510 - L1PA3 LINE L1 0 6155 6088 754 126 16 16 chr20 64182495 64182622 -2485383 + L1PA2 LINE L1 5999 6125 -30 191 293 0 0 chr20 64182625 64182666 -2485339 + L2 LINE L2 3212 3252 -20 236 336 205 0 chr20 64185259 64185381 -2482624 + L2 LINE L2 3126 3272 0 477 299 6 37 chr20 64185498 64185676 -2482329 + MIR SINE MIR 6 178 -30 226 184 0 20 chr20 64185860 64185909 -2482096 + MIR SINE MIR 179 226 -36 473 220 0 9 chr20 64185980 64186213 -2481792 + (CAT)n Simple_repeat Simple_repeat 1 230 0 834 145 14 0 chr20 64186215 64186441 -2481564 + (CACCAT)n Simple_repeat Simple_repeat 1 229 0 889 120 6 17 chr20 64186458 64186633 -2481372 + (CACCAT)n Simple_repeat Simple_repeat 4 176 0 238 255 38 38 chr20 64187090 64187196 -2480809 + MIR SINE MIR 42 147 -61 329 341 66 56 chr20 64187632 64188025 -2479980 - L2 LINE L2 0 3313 2917 1861 153 0 3 chr20 64188094 64188382 -2479623 - AluSx SINE Alu -25 287 1 1123 244 25 11 chr20 64189218 64189497 -2478508 + L1MB8 LINE L1 5896 6178 0 578 268 51 33 chr20 64190448 64190724 -2477281 + MLT1D LTR MaLR 1 281 -224 * 1179 225 44 19 chr20 64190705 64191021 -2476984 + MLT1D LTR MaLR 182 505 0 2074 115 0 34 chr20 64191763 64192086 -2475919 - AluSx SINE Alu 0 312 1 209 400 48 0 chr20 64192521 64192646 -2475359 - L2 LINE L2 -8 3305 3175 2184 110 0 0 chr20 64192672 64192973 -2475032 + AluSx SINE Alu 1 301 -11 243 272 86 0 chr20 64195662 64195743 -2472262 + MER117 DNA MER1_type 107 194 -3 215 328 0 0 chr20 64196185 64196246 -2471759 + CT-rich Low_complexity Low_complexity 2 62 0 1149 200 42 0 chr20 64196467 64196682 -2471323 - MER58A DNA MER1_type 0 224 1 399 353 157 0 chr20 64196914 64197200 -2470805 + MLT1K LTR MaLR 252 582 -6 977 132 0 11 chr20 64199156 64199338 -2468667 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 513 121 0 0 chr20 64199351 64199434 -2468571 + (TCCA)n Simple_repeat Simple_repeat 4 86 0 471 244 50 25 chr20 64200219 64200379 -2467626 + MIR SINE MIR 20 183 -79 362 176 12 0 chr20 64200460 64200545 -2467460 + G-rich Low_complexity Low_complexity 2 87 0 1232 257 39 74 chr20 64202370 64202939 -2465066 + L1MC4 LINE L1 7493 8041 -1 635 280 58 27 chr20 64202966 64203191 -2464814 - MIR SINE MIR 0 262 31 372 385 103 10 chr20 64203278 64203665 -2464340 - L2 LINE L2 -5 3308 2886 2445 86 39 8 chr20 64203728 64204087 -2463918 - THE1C LTR MaLR -5 370 1 1643 179 34 0 chr20 64204267 64204558 -2463447 - AluJo SINE Alu -11 301 1 1832 185 46 14 chr20 64204642 64204993 -2463012 + MLT1A1 LTR MaLR 1 362 -3 575 166 12 11 chr20 64206849 64207208 -2460797 + (CCA)n Simple_repeat Simple_repeat 1 359 0 2611 128 36 5 chr20 64207537 64207950 -2460055 - MSTB LTR MaLR 0 426 1 484 193 92 66 chr20 64207987 64208179 -2459826 + MLT1C LTR MaLR 6 197 -193 807 236 91 5 chr20 64210467 64210666 -2457339 - MER58A DNA MER1_type 0 224 9 212 331 35 55 chr20 64210798 64210943 -2457062 + MIR SINE MIR 42 183 -79 280 100 150 0 chr20 64211942 64212002 -2456003 + L1PA16 LINE L1 6091 6159 -7 2068 123 19 13 chr20 64212440 64212749 -2455256 + AluSx SINE Alu 1 311 -1 2097 125 0 3 chr20 64212925 64213222 -2454783 - AluSg SINE Alu -14 296 1 513 333 25 0 chr20 64214871 64215075 -2452930 + MER58A DNA MER1_type 1 209 -15 234 310 0 26 chr20 64217131 64217244 -2450761 + (CA)n Simple_repeat Simple_repeat 1 110 0 301 400 6 0 chr20 64217288 64217463 -2450542 + (CA)n Simple_repeat Simple_repeat 2 177 0 245 397 23 0 chr20 64217406 64217537 -2450468 + (CATG)n Simple_repeat Simple_repeat 3 136 0 * 835 280 69 0 chr20 64218514 64218789 -2449216 + L1ME3A LINE L1 5455 5748 -422 3869 189 33 17 chr20 64218809 64219529 -2448476 - L1MB7 LINE L1 -19 6165 5457 2111 128 0 3 chr20 64219529 64219842 -2448163 - AluSx SINE Alu 0 312 1 3869 189 33 17 chr20 64219842 64220542 -2447463 - L1MB7 LINE L1 -727 5457 4727 990 260 99 23 chr20 64220567 64220921 -2447084 + L1ME3A LINE L1 5781 6161 -9 526 372 28 0 chr20 64221067 64221285 -2446720 - MIR SINE MIR -2 260 37 318 170 21 75 chr20 64221895 64222083 -2445922 + (CAGG)n Simple_repeat Simple_repeat 3 180 0 247 151 93 0 chr20 64222162 64222248 -2445757 + (CAGGG)n Simple_repeat Simple_repeat 3 96 0 198 0 0 0 chr20 64224661 64224683 -2443322 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 2367 69 0 25 chr20 64224745 64225062 -2442943 + AluY SINE Alu 1 309 -2 242 262 27 0 chr20 64225840 64225989 -2442016 + (CA)n Simple_repeat Simple_repeat 2 154 0 201 182 23 0 chr20 64226009 64226053 -2441952 + (CA)n Simple_repeat Simple_repeat 1 45 0 375 296 12 6 chr20 64226072 64226234 -2441771 + (CA)n Simple_repeat Simple_repeat 1 163 0 300 206 19 19 chr20 64226276 64226436 -2441569 + (CA)n Simple_repeat Simple_repeat 1 160 0 223 192 19 0 chr20 64226467 64226519 -2441486 + (CA)n Simple_repeat Simple_repeat 1 53 0 490 248 87 44 chr20 64227884 64228090 -2439915 - MER20 DNA MER1_type -2 217 3 1995 175 42 25 chr20 64228971 64229510 -2438495 + MLT2A2 LTR ERVL 1 546 -8 283 281 231 0 chr20 64229917 64230038 -2437967 + L1MC/D LINE L1 5592 5740 -2068 395 256 47 18 chr20 64230039 64230198 -2437807 - MLT1I LTR MaLR -2 407 280 430 266 24 24 chr20 64230263 64230387 -2437618 - MLT1I LTR MaLR -257 152 29 1759 177 49 0 chr20 64232626 64232970 -2435035 + MLT1B LTR MaLR 30 390 0 342 253 55 0 chr20 64235443 64235534 -2432471 - MER20 DNA MER1_type -72 147 52 183 80 0 0 chr20 64235534 64235559 -2432446 + (TATG)n Simple_repeat Simple_repeat 3 27 0 205 118 39 20 chr20 64235769 64235820 -2432185 + CT-rich Low_complexity Low_complexity 2 53 0 566 211 30 0 chr20 64236563 64236696 -2431309 + MER45A DNA AcHobo 42 178 0 210 247 0 0 chr20 64237032 64237080 -2430925 + MIR SINE MIR 101 147 -115 363 136 0 0 chr20 64237571 64237630 -2430375 + (A)n Simple_repeat Simple_repeat 1 59 0 547 231 82 34 chr20 64239255 64239463 -2428542 + MLT1E1 LTR MaLR 434 651 -3 250 192 96 104 chr20 64240683 64240763 -2427242 - MIR SINE MIR -31 231 151 2279 101 0 3 chr20 64240763 64241069 -2426936 - AluSx SINE Alu -7 305 1 250 192 96 104 chr20 64241069 64241113 -2426892 - MIR SINE MIR -111 151 108 2062 103 10 0 chr20 64241929 64242254 -2425751 + AluSx SINE Alu 1 312 0 918 174 0 0 chr20 64242254 64242426 -2425579 + AluSg/x SINE Alu 134 305 0 827 163 8 0 chr20 64243642 64243771 -2424234 - FLAM_C SINE Alu -3 130 1 451 122 22 11 chr20 64243782 64243872 -2424133 + C-rich Low_complexity Low_complexity 4 94 0 2088 116 0 3 chr20 64243873 64244165 -2423840 - AluSx SINE Alu -21 291 1 2081 122 3 0 chr20 64244709 64245003 -2423002 + AluSx SINE Alu 1 295 -17 237 265 49 10 chr20 64245073 64245175 -2422830 + L1ME3A LINE L1 6060 6165 -5 1445 12 0 12 chr20 64245597 64245763 -2422242 + L1PA3 LINE L1 5992 6155 0 280 337 0 0 chr20 64246204 64246293 -2421712 + MIR SINE MIR 81 169 -93 380 208 29 46 chr20 64247437 64247476 -2420529 - L1MD3 LINE L1 -2 7986 7948 1887 150 7 0 chr20 64247476 64247770 -2420235 + AluJb SINE Alu 1 296 -16 380 208 29 46 chr20 64247770 64247849 -2420156 - L1MD3 LINE L1 -40 7948 7673 230 262 33 0 chr20 64250584 64250645 -2417360 + tRNA-Thr-ACT tRNA tRNA 13 75 -2 619 309 62 5 chr20 64251721 64251931 -2416074 - MIR SINE MIR -22 240 19 202 312 65 0 chr20 64252018 64252095 -2415910 - MIR SINE MIR -79 183 102 186 167 24 24 chr20 64252435 64252477 -2415528 + MIR SINE MIR 110 151 -111 749 144 42 5 chr20 64253252 64253846 -2414159 + (TGGA)n Simple_repeat Simple_repeat 1 615 0 470 293 57 12 chr20 64254738 64254764 -2413241 + L1ME3A LINE L1 5879 5902 -268 1657 186 10 17 chr20 64254764 64255060 -2412945 + AluJo SINE Alu 1 294 -18 470 293 57 12 chr20 64255060 64255279 -2412726 + L1ME3A LINE L1 5902 6135 -35 243 235 0 15 chr20 64256368 64256436 -2411569 + GA-rich Low_complexity Low_complexity 1 67 0 4101 150 53 48 chr20 64257615 64258394 -2409611 + LTR39 LTR ERV1 1 783 0 2240 161 40 31 chr20 64261106 64261528 -2406477 + MSTB LTR MaLR 1 426 0 1596 182 95 3 chr20 64264320 64264667 -2403338 - L1MC3 LINE L1 -2 7783 7405 182 204 82 0 chr20 64267700 64267749 -2400256 + MIR SINE MIR 71 123 -85 196 320 29 10 chr20 64272907 64273010 -2394995 - MIR SINE MIR -69 139 35 1300 130 74 9 chr20 64273383 64273599 -2394406 - MER30 DNA MER1_type 0 230 1 6338 36 0 0 chr20 64274039 64274779 -2393226 - L1PA5 LINE L1 0 6154 5415 457 308 54 30 chr20 64274833 64275276 -2392729 + L1MEc LINE L1 2042 2457 -3758 291 225 0 0 chr20 64275320 64275391 -2392614 + L1ME2 LINE L1 5657 5727 -437 536 223 95 24 chr20 64275464 64275675 -2392330 + L1ME2 LINE L1 5935 6160 -6 248 309 9 82 chr20 64275699 64275843 -2392162 + L1MC4 LINE L1 7826 7948 -94 2027 131 7 13 chr20 64275843 64276141 -2391864 - AluJb SINE Alu -16 296 1 248 309 9 82 chr20 64276141 64276229 -2391776 + L1MC4 LINE L1 7948 8041 -1 2351 116 0 0 chr20 64276335 64276638 -2391367 - AluSx SINE Alu -9 303 1 325 164 28 23 chr20 64276657 64276748 -2391257 - Alu SINE Alu -2 300 248 184 303 123 16 chr20 64276954 64277076 -2390929 + L2 LINE L2 3133 3267 -5 521 298 63 57 chr20 64279330 64279646 -2388359 + L2 LINE L2 2966 3283 -30 516 296 0 0 chr20 64279697 64279876 -2388129 + (CAT)n Simple_repeat Simple_repeat 1 179 0 * 553 255 0 0 chr20 64279742 64280104 -2387901 + (CAA)n Simple_repeat Simple_repeat 1 362 0 261 279 0 0 chr20 64280141 64280320 -2387685 + (CCA)n Simple_repeat Simple_repeat 1 179 0 201 255 0 0 chr20 64280369 64280467 -2387538 + (CCA)n Simple_repeat Simple_repeat 1 98 0 363 273 8 8 chr20 64280469 64280601 -2387404 + (CAA)n Simple_repeat Simple_repeat 3 134 0 725 270 140 31 chr20 64281529 64281549 -2386456 - L1ME2 LINE L1 -175 5989 5973 2412 86 0 0 chr20 64281549 64281840 -2386165 - AluSg SINE Alu -19 291 1 725 270 140 31 chr20 64281840 64282175 -2385830 - L1ME2 LINE L1 -191 5973 5595 301 313 38 44 chr20 64282233 64282393 -2385612 + MER5A DNA MER1_type 9 167 -22 352 328 17 0 chr20 64282474 64282590 -2385415 + MIR SINE MIR 95 212 -50 310 234 215 0 chr20 64282781 64282888 -2385117 - L1ME LINE L1 -437 5727 5598 305 49 0 0 chr20 64282899 64282940 -2385065 - MADE1 DNA Mariner -39 41 1 209 274 20 0 chr20 64283365 64283416 -2384589 - MER5A DNA MER1_type -128 61 10 1156 211 4 0 chr20 64284990 64285237 -2382768 + L1M4 LINE L1 4827 5074 -1072 1622 206 13 7 chr20 64285349 64285650 -2382355 - AluJo SINE Alu -9 303 1 319 213 0 40 chr20 64288409 64288484 -2379521 - MLT1H LTR MaLR -73 476 405 25 0 0 0 chr20 64288566 64288591 -2379414 + GC_rich Low_complexity Low_complexity 1 25 0 650 309 60 17 chr20 64289222 64289455 -2378550 + MIR SINE MIR 3 245 -17 588 224 50 45 chr20 64290933 64291112 -2376893 - MER20 DNA MER1_type -34 185 6 806 264 107 29 chr20 64292070 64292620 -2375385 + L1MEc LINE L1 839 1386 -4829 1293 13 0 0 chr20 64292629 64292781 -2375224 - L1P1 LINE L1 -336 5819 5668 2400 18 14 0 chr20 64292781 64293053 -2374952 + L1PA4 LINE L1 5874 6154 -1 538 305 33 56 chr20 64293076 64293470 -2374535 + L1MEc LINE L1 1419 1803 -4593 336 258 157 13 chr20 64295628 64295787 -2372218 + MIR SINE MIR 22 203 -59 203 176 0 0 chr20 64295860 64295894 -2372111 + (CA)n Simple_repeat Simple_repeat 2 35 0 182 146 0 24 chr20 64296562 64296603 -2371402 + (GGGAGA)n Simple_repeat Simple_repeat 6 45 0 558 144 22 44 chr20 64296628 64296809 -2371196 + GA-rich Low_complexity Low_complexity 2 178 0 2322 93 3 44 chr20 64297785 64298106 -2369899 + AluSx SINE Alu 1 308 -4 429 179 0 0 chr20 64298406 64298529 -2369476 + (TG)n Simple_repeat Simple_repeat 1 123 0 1167 260 49 3 chr20 64298863 64299228 -2368777 - MER63 DNA MER1_type -6 1055 674 1665 100 0 15 chr20 64299617 64299887 -2368118 + L1MA3 LINE L1 3295 3560 -4005 14462 160 25 10 chr20 64299890 64303851 -2364154 + L1MA3 LINE L1 3700 7724 0 1782 249 39 24 chr20 64303908 64304441 -2363564 + MER77 LTR ERV1 54 594 -11 520 138 0 12 chr20 64304699 64304779 -2363226 - AluJ/FLAM SINE Alu -228 84 6 278 333 53 21 chr20 64305050 64305239 -2362766 + MIR SINE MIR 66 260 -2 1700 197 0 23 chr20 64305387 64305697 -2362308 - AluSx SINE Alu -9 303 1 424 139 38 0 chr20 64308306 64308385 -2359620 + MER67D LTR ERV1 2 83 -431 662 203 166 0 chr20 64308393 64308580 -2359425 + MER67D LTR ERV1 297 514 0 274 247 14 0 chr20 64308631 64308704 -2359301 + MER67D-int LTR ERV1 17 90 -4846 2260 137 28 14 chr20 64308980 64309339 -2358666 - THE1B LTR MaLR 0 364 1 289 185 0 0 chr20 64309417 64309471 -2358534 + MER67D-int LTR ERV1 398 451 -4485 403 278 11 0 chr20 64313455 64313631 -2354374 + (CCA)n Simple_repeat Simple_repeat 3 180 0 271 270 0 14 chr20 64313636 64313710 -2354295 + (CAT)n Simple_repeat Simple_repeat 3 75 0 423 232 11 17 chr20 64313710 64313887 -2354118 + (CACCAT)n Simple_repeat Simple_repeat 4 179 0 553 188 0 33 chr20 64313960 64314141 -2353864 + (CACCAT)n Simple_repeat Simple_repeat 2 176 0 317 296 11 0 chr20 64314142 64314230 -2353775 + (CCA)n Simple_repeat Simple_repeat 1 89 0 316 182 23 57 chr20 64314231 64314407 -2353598 + (CACCAT)n Simple_repeat Simple_repeat 1 170 0 * 320 283 0 11 chr20 64314382 64314562 -2353443 + (CCA)n Simple_repeat Simple_repeat 1 178 0 * 447 182 15 57 chr20 64314538 64314820 -2353185 + (CACCAT)n Simple_repeat Simple_repeat 1 270 0 686 231 26 70 chr20 64315664 64315893 -2352112 - MER20 DNA MER1_type 0 219 1 305 198 12 0 chr20 64316107 64316193 -2351812 + (TCCA)n Simple_repeat Simple_repeat 2 88 0 496 194 6 6 chr20 64316223 64316383 -2351622 + (TCCA)n Simple_repeat Simple_repeat 1 160 0 729 298 135 28 chr20 64316485 64317093 -2350912 + MER20B DNA MER1_type 1 673 -110 328 148 49 37 chr20 64317093 64317174 -2350831 + L1MD2 LINE L1 6051 6132 -227 808 77 92 0 chr20 64317174 64317302 -2350703 + L1MB7 LINE L1 6034 6175 -9 2507 63 0 0 chr20 64317514 64317813 -2350192 + AluY SINE Alu 1 299 -12 391 305 31 8 chr20 64317962 64318090 -2349915 + L2 LINE L2 3165 3295 -18 2796 84 14 3 chr20 64318150 64318521 -2349484 - THE1C LTR MaLR 0 375 1 184 377 41 32 chr20 64318685 64318905 -2349100 - MIR SINE MIR -18 244 23 233 307 13 0 chr20 64320522 64320597 -2347408 + CT-rich Low_complexity Low_complexity 3 78 0 257 224 208 48 chr20 64320811 64320936 -2347069 - MIR SINE MIR -108 154 10 183 270 79 16 chr20 64321350 64321413 -2346592 - L2 LINE L2 -4 3268 3202 189 0 0 0 chr20 64324613 64324634 -2343371 + (A)n Simple_repeat Simple_repeat 1 21 0 2058 113 0 57 chr20 64324785 64325114 -2342891 + AluSx SINE Alu 1 312 0 237 307 85 28 chr20 64325587 64325763 -2342242 + L1ME LINE L1 5631 5816 -305 236 254 17 0 chr20 64326670 64326729 -2341276 + G-rich Low_complexity Low_complexity 3 62 0 549 222 0 0 chr20 64327250 64327561 -2340444 + (CA)n Simple_repeat Simple_repeat 1 311 0 468 232 0 0 chr20 64327598 64327775 -2340230 + (CA)n Simple_repeat Simple_repeat 2 178 0 537 236 4 0 chr20 64327821 64328070 -2339935 + (CA)n Simple_repeat Simple_repeat 1 250 0 357 205 0 0 chr20 64328085 64328202 -2339803 + (CA)n Simple_repeat Simple_repeat 2 118 0 543 201 0 0 chr20 64328223 64328382 -2339623 + (CA)n Simple_repeat Simple_repeat 2 160 0 308 174 11 0 chr20 64328405 64328497 -2339508 + (CA)n Simple_repeat Simple_repeat 2 94 0 567 261 22 71 chr20 64329187 64329413 -2338592 + MER20 DNA MER1_type 1 215 -4 1792 210 22 0 chr20 64330415 64330772 -2337233 - MLT1A1 LTR MaLR 0 365 1 275 264 139 0 chr20 64330875 64331004 -2337001 + MIR3 SINE MIR 61 207 -1 403 295 33 74 chr20 64332510 64332727 -2335278 + MLT1H1 LTR MaLR 39 290 -305 397 328 83 0 chr20 64334154 64334358 -2333647 + MER58A DNA MER1_type 4 224 0 328 295 36 0 chr20 64335213 64335325 -2332680 - L2 LINE L2 -19 3294 3179 1497 239 133 53 chr20 64335327 64335991 -2332014 + MER21B LTR ERV1 25 741 -122 381 249 153 54 chr20 64336062 64336303 -2331702 - L2 LINE L2 -160 3112 2848 240 279 90 9 chr20 64336923 64337034 -2330971 + MIR SINE MIR 65 184 -78 1519 251 69 41 chr20 64338713 64339120 -2328885 + L1ME2 LINE L1 4588 5021 -1125 2418 102 0 0 chr20 64339120 64339425 -2328580 + AluSx SINE Alu 1 305 -7 1519 251 69 41 chr20 64339425 64339654 -2328351 + L1ME2 LINE L1 5021 5242 -904 191 128 51 0 chr20 64339654 64339693 -2328312 + (CATA)n Simple_repeat Simple_repeat 2 42 0 2117 268 49 34 chr20 64339724 64340579 -2327426 + L1ME2 LINE L1 5255 6122 -42 2167 141 0 6 chr20 64340599 64340912 -2327093 + AluJb SINE Alu 1 311 -1 432 268 36 7 chr20 64342133 64342271 -2325734 + MER5A DNA MER1_type 16 157 -32 1029 140 0 0 chr20 64342395 64342429 -2325576 + (TCCA)n Simple_repeat Simple_repeat 1 212 0 1029 140 0 0 chr20 64342429 64342607 -2325398 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 616 309 31 35 chr20 64342887 64343143 -2324862 + MIR SINE MIR 8 262 0 345 195 106 32 chr20 64343462 64343585 -2324420 - L1ME3A LINE L1 -12 6158 6027 384 231 36 147 chr20 64343665 64343890 -2324115 - L1ME3A LINE L1 -347 5823 5624 * 402 304 71 11 chr20 64343889 64344073 -2323932 - L1ME LINE L1 -508 5662 5468 382 261 4 21 chr20 64347723 64348267 -2319738 + (TG)n Simple_repeat Simple_repeat 1 534 0 181 343 76 19 chr20 64348354 64348459 -2319546 - L2 LINE L2 -458 2856 2746 384 226 139 15 chr20 64349219 64349356 -2318649 + MLT2E LTR ERVL 474 627 -1 2522 78 10 0 chr20 64349804 64350112 -2317893 - AluSp SINE Alu 0 313 3 491 275 48 67 chr20 64350113 64350444 -2317561 - Charlie7 DNA MER1_type -1968 644 320 270 149 27 40 chr20 64350600 64350674 -2317331 - L1ME3A LINE L1 -8 6162 6090 394 294 32 37 chr20 64350692 64350879 -2317126 - L1ME3A LINE L1 -133 6037 5852 546 332 29 13 chr20 64351498 64351736 -2316269 - L1ME3A LINE L1 -369 5801 5560 372 222 77 26 chr20 64353290 64353407 -2314598 + MLT1C LTR MaLR 189 311 -156 334 222 0 0 chr20 64353417 64353480 -2314525 - AluJb SINE Alu -50 252 190 * 525 259 7 14 chr20 64353473 64353620 -2314385 + MLT1C LTR MaLR 318 463 -4 2563 60 0 13 chr20 64353748 64354063 -2313942 + AluY SINE Alu 1 311 0 331 157 36 36 chr20 64354887 64355027 -2312978 + GA-rich Low_complexity Low_complexity 6 145 0 386 264 12 60 chr20 64355548 64355715 -2312290 + MER33 DNA MER1_type 54 212 -112 1736 195 15 34 chr20 64355736 64355959 -2312046 + L1MB3 LINE L1 5442 5668 -515 2173 117 34 0 chr20 64355959 64356250 -2311755 + AluSg SINE Alu 1 301 -9 2025 158 0 0 chr20 64356259 64356550 -2311455 + AluSx SINE Alu 1 291 -21 1736 195 15 34 chr20 64356550 64356856 -2311149 + L1MB3 LINE L1 5676 6131 -52 303 248 98 15 chr20 64356859 64356992 -2311013 + MER33 DNA MER1_type 173 316 -8 385 266 0 18 chr20 64357029 64357142 -2310863 - MER5A DNA MER1_type -76 113 3 1586 220 30 0 chr20 64358044 64358410 -2309595 + MLT1B LTR MaLR 8 496 -9 299 263 39 0 chr20 64358743 64358853 -2309152 - MIR SINE MIR -58 150 34 500 296 61 43 chr20 64359313 64359543 -2308462 + MLT1K LTR MaLR 40 273 -315 674 244 72 0 chr20 64359806 64359999 -2308006 + MER63A DNA MER1_type 1 207 -3 408 163 0 0 chr20 64361099 64361185 -2306820 + (TGGA)n Simple_repeat Simple_repeat 2 87 0 664 204 11 0 chr20 64361247 64361423 -2306582 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 236 200 15 0 chr20 64361445 64361510 -2306495 + (TGGA)n Simple_repeat Simple_repeat 3 68 0 486 225 12 6 chr20 64361531 64361700 -2306305 + (TGGA)n Simple_repeat Simple_repeat 3 172 0 528 218 12 6 chr20 64361721 64361891 -2306114 + (TGGA)n Simple_repeat Simple_repeat 3 173 0 354 214 0 0 chr20 64361971 64362060 -2305945 + (TGGA)n Simple_repeat Simple_repeat 2 90 0 271 339 63 23 chr20 64362191 64362412 -2305593 + MIR SINE MIR 32 261 -1 315 295 44 44 chr20 64363744 64363927 -2304078 - L1ME3 LINE L1 -2 6162 5980 601 272 72 15 chr20 64363947 64364345 -2303660 + MLT1D LTR MaLR 1 467 0 933 290 27 37 chr20 64364345 64364752 -2303253 - L1ME3 LINE L1 -210 5952 5550 221 363 10 10 chr20 64364937 64365039 -2302966 - L2 LINE L2 -253 3060 2959 203 200 21 76 chr20 64365834 64365979 -2302026 + (CAGAG)n Simple_repeat Simple_repeat 3 139 0 2440 50 46 0 chr20 64366279 64366561 -2301444 + AluY SINE Alu 1 295 -16 2194 117 0 3 chr20 64367199 64367490 -2300515 - AluSc SINE Alu -19 290 1 823 273 28 36 chr20 64369063 64369378 -2298627 - MLT1J LTR MaLR -195 420 28 181 263 168 32 chr20 64369407 64369485 -2298520 + MIR SINE MIR 93 188 -74 1992 141 20 15 chr20 64369485 64369568 -2298437 - MER2 DNA MER2_type -1 343 262 2164 130 13 0 chr20 64369568 64369867 -2298138 + AluSx SINE Alu 1 303 -9 1992 141 20 15 chr20 64369867 64370124 -2297881 - MER2 DNA MER2_type -82 262 1 181 263 168 32 chr20 64370124 64370140 -2297865 + MIR SINE MIR 188 200 -62 384 256 31 16 chr20 64370661 64370790 -2297215 + MLT1K LTR MaLR 444 574 -14 404 227 132 52 chr20 64371632 64371785 -2296220 + MLT1I LTR MaLR 251 387 -22 229 213 75 38 chr20 64372727 64372807 -2295198 + L1MC5 LINE L1 7844 7926 -35 2946 16 0 0 chr20 64372827 64373139 -2294866 + AluYb8 SINE Alu 1 312 -6 1362 229 43 16 chr20 64373497 64373872 -2294133 + MLT2D LTR ERVL 24 408 -6 1779 163 17 7 chr20 64375049 64375338 -2292667 + AluJb SINE Alu 1 292 -20 234 208 31 104 chr20 64375341 64375437 -2292568 - HAL1 LINE L1 -3 2504 2416 602 182 44 77 chr20 64376050 64376231 -2291774 - MER58A DNA MER1_type -13 211 37 521 248 108 5 chr20 64376240 64376462 -2291543 + Charlie7 DNA MER1_type 494 738 -1874 1805 176 7 0 chr20 64376471 64376761 -2291244 - AluJb SINE Alu -20 292 1 512 283 46 83 chr20 64377417 64377852 -2290153 + Charlie8 DNA MER1_type 32 450 -1967 666 250 40 0 chr20 64382435 64382611 -2285394 - MER20 DNA MER1_type 0 219 37 325 298 21 11 chr20 64382755 64382849 -2285156 - L2 LINE L2 -4 3268 3174 380 312 93 37 chr20 64383198 64383413 -2284592 + L1ME LINE L1 5573 5799 -322 275 313 39 8 chr20 64383623 64383751 -2284254 + L1M LINE L1 5295 5426 -744 211 300 22 11 chr20 64384366 64384456 -2283549 + G-rich Low_complexity Low_complexity 4 94 0 180 167 0 0 chr20 64384614 64384662 -2283343 + (TG)n Simple_repeat Simple_repeat 1 48 0 372 210 0 32 chr20 64384698 64384884 -2283121 + (TG)n Simple_repeat Simple_repeat 1 180 0 558 207 0 0 chr20 64384908 64385087 -2282918 + (TG)n Simple_repeat Simple_repeat 2 180 0 28 0 0 0 chr20 64385171 64385199 -2282806 + AT_rich Low_complexity Low_complexity 1 28 0 201 341 35 0 chr20 64385500 64385585 -2282420 - MIR SINE MIR -25 237 150 206 360 81 24 chr20 64386402 64386649 -2281356 - L2 LINE L2 -208 3064 2804 663 350 63 31 chr20 64387113 64387702 -2280303 + L1MEd LINE L1 502 1109 -5010 3033 94 0 0 chr20 64387982 64388384 -2279621 + MLT2A1 LTR ERVL 1 402 -42 342 274 48 0 chr20 64388386 64388470 -2279535 - L1MC4 LINE L1 -1341 6701 6614 362 250 71 45 chr20 64388474 64388586 -2279419 - L1MC4 LINE L1 -1339 6703 6589 348 234 29 101 chr20 64388585 64388830 -2279175 - L1MC4 LINE L1 -1339 6983 1995 * 384 249 91 54 chr20 64388831 64389089 -2278916 - L1MC4 LINE L1 -1339 6983 1994 357 287 87 17 chr20 64389058 64389173 -2278832 - L1MC4 LINE L1 -1337 6985 6863 * 356 77 0 9 chr20 64389186 64389246 -2278759 + MLT2A1 LTR ERVL 396 444 0 890 249 100 80 chr20 64389293 64389742 -2278263 + MLT1C LTR MaLR 8 465 -2 2260 118 3 9 chr20 64390150 64390465 -2277540 - AluSq SINE Alu 0 313 1 235 331 47 59 chr20 64393104 64393273 -2274732 - MIR SINE MIR -23 239 73 365 222 123 37 chr20 64393322 64393484 -2274521 + L1MD2 LINE L1 6182 6357 -2 956 237 93 58 chr20 64393527 64393944 -2274061 + MLT1C LTR MaLR 21 467 0 1766 175 3 7 chr20 64393990 64394287 -2273718 - AluJo SINE Alu -16 296 1 308 269 10 19 chr20 64395998 64396102 -2271903 + (CCA)n Simple_repeat Simple_repeat 2 104 0 297 169 31 38 chr20 64396115 64396275 -2271730 + (CCA)n Simple_repeat Simple_repeat 1 159 0 394 164 41 18 chr20 64396284 64396455 -2271550 + (CACCAT)n Simple_repeat Simple_repeat 2 176 0 390 169 54 0 chr20 64396485 64396651 -2271354 + (CACCAT)n Simple_repeat Simple_repeat 2 176 0 378 200 22 22 chr20 64396678 64396858 -2271147 + (CCA)n Simple_repeat Simple_repeat 1 180 0 366 250 9 19 chr20 64396860 64396968 -2271037 + (CACCAT)n Simple_repeat Simple_repeat 5 111 0 182 222 22 0 chr20 64396968 64397013 -2270992 - MIR SINE MIR -8 254 209 2285 165 64 22 chr20 64397023 64397548 -2270457 - MER4B LTR ERV1 0 779 63 595 159 63 24 chr20 64397549 64397675 -2270330 - MER4B LTR ERV1 -479 131 1 492 276 15 0 chr20 64397681 64397815 -2270190 - MIR SINE MIR -87 175 40 342 275 74 35 chr20 64399043 64399272 -2268733 - MER102a DNA MER1_type -22 308 71 317 200 12 0 chr20 64402538 64402618 -2265387 - L1MC4 LINE L1 -1 8041 7961 398 261 127 21 chr20 64402636 64402778 -2265227 - L1MC4 LINE L1 -188 7854 7698 2412 107 0 0 chr20 64402779 64403087 -2264918 - AluSg SINE Alu -2 308 1 1668 174 17 0 chr20 64605941 64606240 -2061765 + AluJo SINE Alu 1 304 -8 1214 145 0 0 chr20 64606240 64606419 -2061586 + AluJo/FRAM SINE Alu 134 312 0 21 0 0 0 chr20 64606426 64606447 -2061558 + AT_rich Low_complexity Low_complexity 1 21 0 2254 107 0 0 chr20 64606457 64606755 -2061250 + AluSq SINE Alu 1 298 -15 2080 125 6 0 chr20 64606757 64607068 -2060937 + AluSp SINE Alu 1 313 0 1198 220 34 18 chr20 64609400 64609727 -2058278 + MLT1A1 LTR MaLR 21 352 -13 460 205 60 0 chr20 64610367 64610484 -2057521 + MER20 DNA MER1_type 1 124 -95 381 329 7 7 chr20 64610836 64610988 -2057017 + (CGTG)n Simple_repeat Simple_repeat 4 155 0 2096 96 0 4 chr20 64613000 64613280 -2054725 + AluSg SINE Alu 1 279 -31 186 43 0 0 chr20 64613285 64613308 -2054697 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 666 136 7 22 chr20 64613915 64614197 -2053808 + (CA)n Simple_repeat Simple_repeat 1 277 0 1237 114 0 0 chr20 64614727 64614894 -2053111 - AluSg/x SINE Alu -13 299 133 207 0 0 0 chr20 64614894 64614917 -2053088 + (TA)n Simple_repeat Simple_repeat 2 24 0 2638 30 0 0 chr20 64614917 64615219 -2052786 - AluY SINE Alu -9 302 1 253 233 0 17 chr20 64617399 64617459 -2050546 + LTR49-int LTR ERV1 576 634 -5697 422 184 82 61 chr20 64617497 64617644 -2050361 + LTR49-int LTR ERV1 1387 1536 -4795 2388 69 0 22 chr20 64617645 64617963 -2050042 + AluY SINE Alu 1 311 0 2157 238 32 59 chr20 64617967 64618716 -2049289 + LTR49-int LTR ERV1 2814 3542 -1394 1719 141 54 24 chr20 64618717 64619015 -2048990 - AluJo SINE Alu -5 307 1 3139 184 69 95 chr20 64619019 64619334 -2048671 - MER31-int LTR ERV1 -371 4565 4243 2419 85 0 0 chr20 64619334 64619640 -2048365 - AluSp SINE Alu -7 306 1 2316 98 0 0 chr20 64619646 64619952 -2048053 - AluSx SINE Alu -6 306 1 3139 184 69 95 chr20 64619952 64620123 -2047882 - MER31-int LTR ERV1 -698 4238 4064 1533 188 3 7 chr20 64620123 64620405 -2047600 - AluJo SINE Alu -10 302 22 3139 184 69 95 chr20 64620405 64620450 -2047555 - MER31-int LTR ERV1 -872 4064 4019 2399 70 3 0 chr20 64620450 64620749 -2047256 - AluY SINE Alu -11 300 1 3139 184 69 95 chr20 64620749 64621188 -2046817 - MER31-int LTR ERV1 -917 4019 3611 1733 167 0 45 chr20 64621456 64621768 -2046237 - AluSx SINE Alu -12 300 3 456 198 260 17 chr20 64621794 64621971 -2046034 + LTR10A LTR ERV1 1 220 -389 1331 62 11 0 chr20 64621971 64622147 -2045858 - AluY SINE Alu -9 302 125 216 250 18 0 chr20 64624422 64624478 -2043527 + (GGGTG)n Simple_repeat Simple_repeat 3 59 0 738 255 106 19 chr20 64625876 64626198 -2041807 + MLT1C LTR MaLR 118 467 0 295 256 128 35 chr20 64626280 64626379 -2041626 + MLT1C-int LTR MaLR 1149 1237 -134 2155 119 0 3 chr20 64626379 64626691 -2041314 - AluSx SINE Alu -1 311 1 295 256 128 35 chr20 64626691 64626763 -2041242 + MLT1C-int LTR MaLR 1237 1336 -35 * 1916 244 51 114 chr20 64626761 64627891 -2040114 + MLT1C-int LTR MaLR 91 1594 -141 2300 93 0 0 chr20 64627891 64628191 -2039814 - AluSx SINE Alu -12 300 1 1916 244 51 114 chr20 64628191 64628320 -2039685 + MLT1C-int LTR MaLR 1594 1730 -5 457 205 39 133 chr20 64628353 64628587 -2039418 + MLT1C LTR MaLR 53 264 -203 203 158 0 26 chr20 64630853 64630891 -2037114 + CT-rich Low_complexity Low_complexity 2 38 0 198 71 0 0 chr20 64638297 64638325 -2029680 + (TCTG)n Simple_repeat Simple_repeat 4 31 0 777 217 39 10 chr20 64638693 64638896 -2029109 - L1MB5 LINE L1 0 6174 5966 183 80 0 0 chr20 64640272 64640297 -2027708 + (TG)n Simple_repeat Simple_repeat 2 26 0 233 309 10 21 chr20 64640332 64640429 -2027576 + (TG)n Simple_repeat Simple_repeat 2 97 0 203 398 23 0 chr20 64642177 64642265 -2025740 + MIR SINE MIR 81 170 -92 372 329 7 7 chr20 64644137 64644277 -2023728 + (CA)n Simple_repeat Simple_repeat 2 141 0 22 0 0 0 chr20 64646311 64646333 -2021672 + GC_rich Low_complexity Low_complexity 1 22 0 193 260 26 39 chr20 64649283 64649360 -2018645 - L2 LINE L2 -60 3212 3137 374 346 17 11 chr20 64649696 64649875 -2018130 + (CA)n Simple_repeat Simple_repeat 1 180 0 467 234 16 43 chr20 64649886 64650070 -2017935 + (CA)n Simple_repeat Simple_repeat 1 179 0 240 111 0 0 chr20 64705071 64705107 -1962898 + (A)n Simple_repeat Simple_repeat 1 36 0 495 244 154 5 chr20 64705518 64705719 -1962286 - MER113 DNA MER1_type? -230 291 61 279 363 9 9 chr20 64705746 64705859 -1962146 - L3 LINE CR1 -48 1529 1417 392 330 84 0 chr20 64706575 64706754 -1961251 - MIR SINE MIR -26 236 43 22 0 0 0 chr20 64707437 64707459 -1960546 + GC_rich Low_complexity Low_complexity 1 22 0 683 274 61 22 chr20 64708719 64708949 -1959056 - MIR SINE MIR -16 246 8 210 192 0 0 chr20 64710402 64710454 -1957551 + C-rich Low_complexity Low_complexity 1 52 0 1732 231 86 25 chr20 64713896 64714386 -1953619 - MLT2B1 LTR ERVL 0 520 1 282 243 0 0 chr20 64716926 64717000 -1951005 + C-rich Low_complexity Low_complexity 1 74 0 216 184 0 0 chr20 64717132 64717170 -1950835 + (TG)n Simple_repeat Simple_repeat 1 38 0 297 279 58 0 chr20 64717859 64717963 -1950042 + MIR SINE MIR 29 138 -124 197 190 103 17 chr20 64717943 64718001 -1950004 + L2 LINE L2 3187 3249 -23 * 2119 59 0 0 chr20 64718715 64718971 -1949034 + L1PA5 LINE L1 5898 6153 -1 416 238 62 25 chr20 64719097 64719276 -1948729 - MLT1C LTR MaLR -258 247 48 703 284 90 35 chr20 64719716 64720061 -1947944 - MLT1B LTR MaLR -26 364 1 185 135 68 27 chr20 64724118 64724192 -1943813 + (CAGAGA)n Simple_repeat Simple_repeat 6 82 0 237 304 0 59 chr20 64729716 64729851 -1938154 + C-rich Low_complexity Low_complexity 4 130 0 292 139 0 42 chr20 64731005 64731077 -1936928 + (CCCCCT)n Simple_repeat Simple_repeat 6 74 0 257 188 42 0 chr20 64731176 64731224 -1936781 + MIR SINE MIR 94 143 -119 180 231 39 0 chr20 64731715 64731767 -1936238 + MIR SINE MIR 85 138 -70 825 231 54 0 chr20 64734838 64735024 -1932981 + Tigger7 DNA MER2_type 7 202 -531 698 278 27 0 chr20 64735239 64735462 -1932543 + Tigger7 DNA MER2_type 191 419 -314 570 194 65 45 chr20 64736221 64736422 -1931583 - MLT1C LTR MaLR -231 236 32 235 258 0 0 chr20 64737353 64737415 -1930590 - MER2 DNA MER2_type -1 344 283 227 290 0 0 chr20 64737391 64737460 -1930545 - MER8 DNA MER2_type -60 179 111 * 418 242 121 0 chr20 64737573 64737722 -1930283 + MLT1F1 LTR MaLR 1 167 -223 449 275 129 30 chr20 64738552 64738847 -1929158 + MLT1F1 LTR MaLR 244 567 0 789 262 105 20 chr20 64739572 64739915 -1928090 + MLT1A2 LTR MaLR 2 373 -1 1815 151 0 17 chr20 64741066 64741358 -1926647 + AluJb SINE Alu 15 301 -11 3269 205 48 23 chr20 64741359 64742236 -1925769 + L1MB7 LINE L1 5279 6177 -7 233 228 18 0 chr20 64742679 64742736 -1925269 + MLT1G1 LTR MaLR 226 283 -312 646 283 80 4 chr20 64743208 64743445 -1924560 + L1ME1 LINE L1 5454 5708 -651 727 150 0 0 chr20 64743449 64743562 -1924443 - AluSg/x SINE Alu -10 302 190 675 301 54 30 chr20 64743562 64743856 -1924149 + L1ME1 LINE L1 5716 6016 -150 1950 118 52 0 chr20 64743856 64744144 -1923861 + AluSx SINE Alu 1 303 -9 675 301 54 30 chr20 64744144 64744205 -1923800 + L1ME1 LINE L1 6016 6074 -92 268 273 53 45 chr20 64744207 64744281 -1923724 + L1ME1 LINE L1 6034 6111 -55 1833 164 0 3 chr20 64744281 64744580 -1923425 - AluJo SINE Alu -12 300 3 268 273 53 45 chr20 64744580 64744637 -1923368 + L1ME1 LINE L1 6111 6166 0 2260 245 49 43 chr20 64745069 64745828 -1922177 - L1M4 LINE L1 -1769 4377 3611 1305 173 98 29 chr20 64745828 64746105 -1921900 - AluJb SINE Alu -16 296 1 2260 245 49 43 chr20 64746105 64746116 -1921889 - L1M4 LINE L1 -2535 3611 3602 661 244 80 20 chr20 64746111 64746312 -1921693 - L1MD2 LINE L1 -16 6343 6131 * 235 197 237 0 chr20 64746554 64746630 -1921375 - L1MD2 LINE L1 -543 5699 5606 * 448 242 113 36 chr20 64746629 64746823 -1921182 - L1M4 LINE L1 -2523 3623 3415 246 304 47 70 chr20 64747058 64747315 -1920690 + MLT1E2-int LTR MaLR 1114 1364 -7 252 0 0 0 chr20 64747569 64747597 -1920408 + (CA)n Simple_repeat Simple_repeat 1 28 0 421 345 40 0 chr20 64747648 64747822 -1920183 + MIR SINE MIR 50 230 -32 1165 252 55 3 chr20 64748417 64748742 -1919263 + MER7A DNA MER2_type 1 340 -6 298 283 11 22 chr20 64749128 64749220 -1918785 + MIR SINE MIR 87 177 -85 188 333 0 0 chr20 64749276 64749324 -1918681 - MIR SINE MIR -106 156 109 256 293 8 30 chr20 64750075 64750208 -1917797 + G-rich Low_complexity Low_complexity 1 130 0 22 0 0 0 chr20 64751544 64751566 -1916439 + AT_rich Low_complexity Low_complexity 1 22 0 2310 81 7 3 chr20 64756153 64756462 -1911543 - AluY SINE Alu -1 310 1 396 0 0 0 chr20 64757545 64757589 -1910416 + (TG)n Simple_repeat Simple_repeat 2 45 0 2299 258 92 8 chr20 64758836 64759588 -1908417 - MER21B LTR ERV1 0 863 49 276 294 0 0 chr20 64759599 64759667 -1908338 - MER21B LTR ERV1 -777 86 19 305 244 37 0 chr20 64759780 64759862 -1908143 + MLT1E2 LTR MaLR 124 208 -418 248 259 0 0 chr20 64760184 64760242 -1907763 + MARNA DNA Mariner 436 493 -93 1883 184 47 19 chr20 64761285 64761650 -1906355 + THE1C LTR MaLR 1 375 0 471 34 162 27 chr20 64761688 64761836 -1906169 + (GGGTG)n Simple_repeat Simple_repeat 1 168 0 711 283 61 9 chr20 64762039 64762516 -1905489 + MER77 LTR ERV1 58 601 -4 253 207 198 0 chr20 64763647 64763758 -1904247 - MLT1K LTR MaLR -25 563 431 1166 257 26 12 chr20 64764079 64764421 -1903584 + MLT1A1 LTR MaLR 19 365 0 233 209 75 0 chr20 64764683 64764750 -1903255 - MLT1J LTR MaLR -341 170 99 181 296 28 14 chr20 64766532 64766603 -1901402 + L2 LINE L2 2994 3065 -248 459 265 38 57 chr20 64767534 64767745 -1900260 - MLT1D LTR MaLR -296 209 3 441 232 136 26 chr20 64767755 64767910 -1900095 - MIR SINE MIR -70 192 21 233 289 0 0 chr20 64768223 64768275 -1899730 + (CA)n Simple_repeat Simple_repeat 2 53 0 389 254 8 51 chr20 64768887 64769005 -1899000 + MER81 DNA DNA 2 114 0 421 169 0 0 chr20 64769983 64770060 -1897945 + MLT1F1 LTR MaLR 491 567 0 2122 78 58 3 chr20 64771509 64771804 -1896201 + AluY SINE Alu 1 311 0 326 251 115 20 chr20 64771958 64772076 -1895929 - MIR SINE MIR -46 162 33 23 0 0 0 chr20 64773588 64773611 -1894394 + GC_rich Low_complexity Low_complexity 1 23 0 351 297 109 0 chr20 64775306 64775444 -1892561 + MIR SINE MIR 91 243 -19 291 205 133 0 chr20 64778491 64778574 -1889431 + L1MC4 LINE L1 7813 7906 -136 2152 91 35 0 chr20 64778737 64779023 -1888982 + AluSq SINE Alu 1 296 -17 693 307 48 35 chr20 64779238 64779635 -1888370 + L1MC5 LINE L1 7029 7430 -531 466 309 6 17 chr20 64779827 64780008 -1887997 + L1MC5 LINE L1 7679 7857 -104 823 202 25 6 chr20 64780946 64781161 -1886844 - L1MB3 LINE L1 0 6181 5948 314 248 199 0 chr20 64781243 64781404 -1886601 + L1ME1 LINE L1 5874 6066 -100 472 337 130 0 chr20 64782344 64782528 -1885477 + MIR SINE MIR 38 245 -17 757 279 196 21 chr20 64782660 64783305 -1884700 - L2 LINE L2 -1 3312 2538 1067 299 71 19 chr20 64783322 64783961 -1884044 - L1ME1 LINE L1 -168 6067 5544 742 244 38 53 chr20 64783942 64784261 -1883744 - L1ME1 LINE L1 -1992 4223 3910 * 461 167 79 18 chr20 64784258 64784372 -1883633 - L1MB3 LINE L1 -2 6181 6061 * 968 156 6 6 chr20 64784412 64784592 -1883413 - L1MB3 LINE L1 -89 6094 5915 * 3332 253 51 22 chr20 64784580 64784939 -1883066 - L1ME1 LINE L1 -2280 3935 3588 2002 134 0 0 chr20 64784939 64785229 -1882776 + AluSx SINE Alu 3 292 -20 3332 253 51 22 chr20 64785229 64786475 -1881530 - L1ME1 LINE L1 -2627 3588 598 256 277 89 9 chr20 64786615 64786727 -1881278 - L1ME1 LINE L1 -5683 522 402 315 328 23 0 chr20 64786908 64787079 -1880926 - L1MEc LINE L1 -5511 885 711 401 330 62 17 chr20 64787460 64787751 -1880254 - L1ME1 LINE L1 -6028 368 65 627 253 220 10 chr20 64789619 64789978 -1878027 - MLT1C LTR MaLR -47 420 1 194 126 11 69 chr20 64790687 64790774 -1877231 + (GGA)n Simple_repeat Simple_repeat 2 83 0 971 171 18 0 chr20 64791465 64791629 -1876376 + AluJb SINE Alu 131 297 -15 314 188 0 0 chr20 64794315 64794384 -1873621 - LTR16A1 LTR ERVL -15 442 374 289 278 21 32 chr20 64794407 64794529 -1873476 + MER5B DNA MER1_type 13 133 -56 2121 98 30 3 chr20 64794546 64794842 -1873163 - AluSx SINE Alu -8 304 1 4388 184 54 26 chr20 64794854 64795981 -1872024 - L1MC2 LINE L1 -10 6334 5172 2324 67 3 0 chr20 64795981 64796303 -1871702 - AluSp SINE Alu 0 323 1 4388 184 54 26 chr20 64796303 64796470 -1871535 - L1MC2 LINE L1 -1172 5172 5011 818 251 41 38 chr20 64796478 64796756 -1871249 - L1MC2 LINE L1 -1094 5052 4771 2186 117 0 3 chr20 64796756 64797055 -1870950 + AluSx SINE Alu 1 298 -14 818 251 41 38 chr20 64797055 64797115 -1870890 - L1MC2 LINE L1 -1375 4771 4713 1216 266 34 78 chr20 64797117 64797733 -1870272 - L1MC2 LINE L1 -2014 4132 3544 564 214 17 0 chr20 64798544 64798717 -1869288 + GA-rich Low_complexity Low_complexity 1 176 0 223 319 85 21 chr20 64798924 64799018 -1868987 - MIR SINE MIR -64 144 45 256 288 14 0 chr20 64799544 64799617 -1868388 + Charlie5 DNA MER1_type 3 76 -2536 * 627 276 92 0 chr20 64799604 64799843 -1868162 + Charlie5 DNA MER1_type 2364 2624 0 1810 160 52 17 chr20 64801678 64802040 -1865965 + THE1C LTR MaLR 1 375 0 367 293 18 42 chr20 64802132 64802299 -1865706 + MER58B DNA MER1_type 177 339 -2 200 271 83 52 chr20 64803736 64803832 -1864173 - MIR3 SINE MIR -32 176 78 219 333 0 0 chr20 64806831 64806888 -1861117 + MIR SINE MIR 113 169 -93 2306 95 0 3 chr20 64809192 64809496 -1858509 + AluY SINE Alu 1 303 -8 1155 129 0 6 chr20 64809496 64809667 -1858338 + AluSp SINE Alu 134 303 -10 379 354 85 55 chr20 64810129 64810601 -1857404 + L1MEd LINE L1 749 1305 -1185 6039 176 67 106 chr20 64811447 64812813 -1855192 + L1MA9 LINE L1 3240 4658 -1654 2184 113 3 0 chr20 64812813 64813115 -1854890 + AluSq SINE Alu 1 303 -10 6039 176 67 106 chr20 64813115 64813567 -1854438 + L1MA9 LINE L1 4658 5126 -1186 2511 171 17 2 chr20 64813567 64813989 -1854016 + MSTC LTR MaLR 1 428 0 6039 176 67 106 chr20 64813989 64814079 -1853926 + L1MA9 LINE L1 5126 5218 -1094 1625 27 0 0 chr20 64814079 64814263 -1853742 + AluY SINE Alu 1 184 -127 6039 176 67 106 chr20 64814263 64815328 -1852677 + L1MA9 LINE L1 5218 6323 11 2581 39 0 3 chr20 64815328 64815635 -1852370 + AluY SINE Alu 1 306 -5 6039 176 67 106 chr20 64815635 64815807 -1852198 + L1MA9 LINE L1 6323 6263 -49 1747 170 0 7 chr20 64815807 64816096 -1851909 - AluJo SINE Alu -25 287 1 6039 176 67 106 chr20 64816096 64816141 -1851864 + L1MA9 LINE L1 6262 6307 -5 21 36 0 0 chr20 64816150 64816178 -1851827 + AT_rich Low_complexity Low_complexity 1 28 0 390 312 133 48 chr20 64816287 64816662 -1851343 - MLT1K LTR MaLR -33 555 149 716 173 6 0 chr20 64819978 64820157 -1847848 + CT-rich Low_complexity Low_complexity 1 180 0 216 111 0 0 chr20 64820176 64820212 -1847793 + (TCCC)n Simple_repeat Simple_repeat 2 37 0 213 194 0 0 chr20 64820217 64820253 -1847752 + polypyrimidine Low_complexity Low_complexity 1 36 0 680 136 23 0 chr20 64820253 64820429 -1847576 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 749 127 21 0 chr20 64820430 64820669 -1847336 + CT-rich Low_complexity Low_complexity 1 244 0 693 144 11 17 chr20 64820700 64820880 -1847125 + CT-rich Low_complexity Low_complexity 2 180 0 203 238 172 8 chr20 64821141 64821263 -1846742 - L2 LINE L2 -262 3051 2910 3125 202 64 9 chr20 64821679 64822607 -1845398 - L1M3 LINE L1 -698 5485 4509 402 219 110 105 chr20 64823607 64823817 -1844188 - MER68 LTR ERV1 -2 603 351 572 272 40 0 chr20 64823852 64824025 -1843980 - MER68 LTR ERV1 -382 180 1 277 347 55 18 chr20 64824078 64824297 -1843708 + L3 LINE CR1 1311 1537 -40 2441 44 0 3 chr20 64824416 64824709 -1843296 + AluY SINE Alu 5 296 -15 234 188 14 110 chr20 64826618 64826705 -1841300 + MIR SINE MIR 86 147 -61 193 260 188 0 chr20 64827090 64827186 -1840819 + MIR SINE MIR 21 134 -128 201 244 0 0 chr20 64827716 64827761 -1840244 + (CTCA)n Simple_repeat Simple_repeat 4 48 0 203 222 0 37 chr20 64827936 64827990 -1840015 + MIR SINE MIR 93 144 -64 234 245 28 56 chr20 64830114 64830257 -1837748 + CT-rich Low_complexity Low_complexity 3 141 0 208 239 15 15 chr20 64831567 64831634 -1836371 + CT-rich Low_complexity Low_complexity 1 67 0 2186 119 6 3 chr20 64832008 64832468 -1835537 + AluSq SINE Alu 1 461 0 500 182 20 27 chr20 64832320 64832644 -1835361 + GA-rich Low_complexity Low_complexity 3 325 0 389 322 41 0 chr20 64833029 64833175 -1834830 + MER5A DNA MER1_type 36 187 -2 306 73 0 0 chr20 64833189 64833230 -1834775 + (TCCA)n Simple_repeat Simple_repeat 3 43 0 340 327 7 4 chr20 64834001 64834290 -1833715 + (CA)n Simple_repeat Simple_repeat 1 290 0 273 292 35 0 chr20 64835752 64835846 -1832159 - MIR SINE MIR -70 138 51 228 313 0 0 chr20 64837326 64837393 -1830612 + LTR16A LTR ERVL 88 154 -296 490 95 0 0 chr20 64837521 64837595 -1830410 + Alu SINE Alu 238 311 0 324 235 41 10 chr20 64838200 64838298 -1829707 - L1MC/D LINE L1 -2174 5634 5534 245 246 33 0 chr20 64840529 64840590 -1827415 - MER91B DNA MER1_type -127 63 1 613 200 157 5 chr20 64840597 64840807 -1827198 - MLT1D LTR MaLR -157 348 107 372 277 108 19 chr20 64841595 64841808 -1826197 - LTR16A LTR ERVL -17 433 202 255 168 76 0 chr20 64841882 64842001 -1826004 + (CAGGA)n Simple_repeat Simple_repeat 3 130 0 372 251 16 49 chr20 64842030 64842256 -1825749 + GA-rich Low_complexity Low_complexity 1 218 0 239 176 0 39 chr20 64843520 64843571 -1824434 - L2 LINE L2 -5 3267 3219 2742 245 46 23 chr20 64844577 64844707 -1823298 + MER67C LTR ERV1 1 127 -583 2100 99 13 3 chr20 64844707 64845009 -1822996 - AluSc SINE Alu -4 305 1 2742 245 46 23 chr20 64845009 64845572 -1822433 + MER67C LTR ERV1 127 710 0 2049 95 11 3 chr20 64846178 64846462 -1821543 + AluSg1 SINE Alu 1 286 -23 1926 116 45 63 chr20 64846641 64846860 -1821145 + MER51A LTR ERV1 1 222 -412 238 67 44 0 chr20 64846860 64846905 -1821100 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 2033 125 0 20 chr20 64846908 64847212 -1820793 - AluSx SINE Alu -14 298 1 1926 116 45 63 chr20 64847212 64847538 -1820467 + MER51A LTR ERV1 224 634 0 1361 266 70 25 chr20 64847711 64848229 -1819776 + MLT1E2 LTR MaLR 79 619 -7 2154 120 0 10 chr20 64848786 64849094 -1818911 + AluSx SINE Alu 2 306 -6 237 184 0 51 chr20 64850186 64850284 -1817721 + (GGGTG)n Simple_repeat Simple_repeat 3 95 0 254 229 10 52 chr20 64850296 64850392 -1817613 + (GGGTG)n Simple_repeat Simple_repeat 4 95 0 2784 110 0 3 chr20 64852205 64852579 -1815426 + THE1C LTR MaLR 3 375 0 315 333 138 5 chr20 64854165 64854354 -1813651 + MIR SINE MIR 23 236 -26 1365 189 0 26 chr20 64854492 64854782 -1813223 - AluJo SINE Alu 0 307 25 232 277 9 9 chr20 64855099 64855211 -1812794 + (TG)n Simple_repeat Simple_repeat 2 113 0 294 282 0 0 chr20 64855295 64855366 -1812639 - MER5A DNA MER1_type -114 75 5 242 170 19 0 chr20 64855789 64855842 -1812163 + MER53 DNA DNA 8 61 -128 242 75 0 274 chr20 64855798 64855904 -1812101 - MER53 DNA DNA -7 182 106 222 150 0 0 chr20 64855918 64855958 -1812047 + (TTATA)n Simple_repeat Simple_repeat 2 41 0 360 0 0 0 chr20 64856080 64856120 -1811885 + (TA)n Simple_repeat Simple_repeat 2 41 0 544 117 21 0 chr20 64856120 64856214 -1811791 - MER53 DNA DNA -93 96 1 281 341 25 84 chr20 64857679 64858002 -1810003 - L2 LINE L2 -7 3265 2962 257 322 124 30 chr20 64858086 64858288 -1809717 + MIR SINE MIR 15 235 -27 320 323 44 6 chr20 64858968 64859126 -1808879 - MIR SINE MIR -77 185 22 262 197 15 45 chr20 64859213 64859279 -1808726 + G-rich Low_complexity Low_complexity 6 69 0 314 197 8 51 chr20 64859330 64859447 -1808558 + (CCCCG)n Simple_repeat Simple_repeat 5 116 0 724 239 99 35 chr20 64859682 64859810 -1808195 - L1MB7 LINE L1 -9 6175 6057 2167 94 10 0 chr20 64859810 64860108 -1807897 + AluSx SINE Alu 1 301 -11 724 239 99 35 chr20 64860108 64860263 -1807742 - L1MB7 LINE L1 -127 6057 5874 847 213 32 0 chr20 64860683 64860694 -1807311 - L1MB7 LINE L1 -776 5370 5361 2289 45 31 7 chr20 64860694 64860986 -1807019 - AluSq SINE Alu -14 299 1 847 213 32 0 chr20 64860986 64861206 -1806799 - L1MB7 LINE L1 -785 5361 5144 24 53 0 0 chr20 64861618 64861656 -1806349 + GC_rich Low_complexity Low_complexity 1 38 0 345 218 11 73 chr20 64861667 64861846 -1806159 + C-rich Low_complexity Low_complexity 3 170 0 277 298 12 18 chr20 64861825 64861993 -1806012 + (CACCC)n Simple_repeat Simple_repeat 3 169 0 * 187 265 20 0 chr20 64862577 64862626 -1805379 - L2 LINE L2 -557 2757 2708 450 36 0 0 chr20 64867629 64867685 -1800320 + (TG)n Simple_repeat Simple_repeat 1 56 0 203 0 37 0 chr20 64867858 64867885 -1800120 + (CA)n Simple_repeat Simple_repeat 1 28 0 341 279 82 39 chr20 64868981 64869189 -1798816 + MLT1E LTR MaLR 96 312 -281 200 322 23 0 chr20 64869688 64869775 -1798230 + C-rich Low_complexity Low_complexity 5 93 0 180 143 0 0 chr20 64869808 64869850 -1798155 + (GGA)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr20 64869983 64870004 -1798001 + GC_rich Low_complexity Low_complexity 1 21 0 360 77 0 0 chr20 64870312 64870364 -1797641 + (CTGGGG)n Simple_repeat Simple_repeat 3 54 0 1460 144 17 4 chr20 64871180 64871416 -1796589 + AluSq SINE Alu 1 239 -74 338 234 0 0 chr20 64873447 64873524 -1794481 - MER58B DNA MER1_type -14 327 251 419 252 54 14 chr20 64873558 64873611 -1794394 + MER58 DNA MER1_type 65 114 -227 2419 80 0 10 chr20 64873611 64873923 -1794082 + AluSg SINE Alu 1 309 -1 419 252 54 14 chr20 64873923 64874016 -1793989 + MER58 DNA MER1_type 114 217 -124 1531 135 123 15 chr20 64875999 64876259 -1791746 + AluSg SINE Alu 1 288 -22 189 0 0 0 chr20 64876259 64876280 -1791725 + (TCTG)n Simple_repeat Simple_repeat 2 22 0 1096 191 5 0 chr20 64880628 64880837 -1787168 - AluJb SINE Alu -23 289 80 225 214 18 0 chr20 64880837 64880893 -1787112 - AluJo SINE Alu -160 142 86 21 36 0 0 chr20 64881807 64881835 -1786170 + GC_rich Low_complexity Low_complexity 1 28 0 206 146 24 0 chr20 64881914 64881955 -1786050 + (CCCG)n Simple_repeat Simple_repeat 2 43 0 27 29 0 0 chr20 64882497 64882531 -1785474 + GC_rich Low_complexity Low_complexity 1 34 0 1652 188 7 3 chr20 64887974 64888278 -1779727 + AluJo SINE Alu 1 305 -7 375 170 0 78 chr20 64895586 64895727 -1772278 + (CCCCAA)n Simple_repeat Simple_repeat 1 130 0 2057 99 16 35 chr20 64898293 64898308 -1769697 - AluSq SINE Alu -7 306 292 2400 60 3 13 chr20 64898308 64898622 -1769383 - AluY SINE Alu 0 311 1 2057 99 16 35 chr20 64898622 64898781 -1769224 - AluSq SINE Alu -21 292 138 2160 93 19 19 chr20 64898781 64899093 -1768912 - AluSx SINE Alu 0 312 1 2057 99 16 35 chr20 64899093 64899229 -1768776 - AluSq SINE Alu -175 138 1 2248 84 10 0 chr20 64899561 64899858 -1768147 - AluSg SINE Alu -10 300 1 1028 266 94 6 chr20 64900093 64900438 -1767567 - MSTD LTR MaLR 0 396 19 2330 91 0 0 chr20 64902446 64902744 -1765261 + AluSg SINE Alu 1 298 -12 1052 99 7 0 chr20 64902754 64902896 -1765109 + AluSq/x SINE Alu 1 143 -170 892 287 52 0 chr20 64903089 64903417 -1764588 - MER7A DNA MER2_type 0 346 1 2157 83 3 23 chr20 64903862 64904162 -1763843 + AluSx SINE Alu 1 294 -18 252 163 0 150 chr20 64904571 64904731 -1763274 + C-rich Low_complexity Low_complexity 18 153 0 2177 105 0 3 chr20 64907399 64907694 -1760311 + AluSq SINE Alu 1 294 -19 538 277 113 30 chr20 64908011 64908383 -1759622 + L1MC5 LINE L1 7416 7818 -143 3616 198 64 16 chr20 64908509 64909327 -1758678 - L1MB4 LINE L1 -1 6179 5323 487 192 50 0 chr20 64909327 64909426 -1758579 - AluJb SINE Alu -4 308 205 280 119 0 119 chr20 64909426 64909485 -1758520 - AluJb SINE Alu -130 172 120 2170 97 0 55 chr20 64909485 64909815 -1758190 - AluSx SINE Alu 0 312 1 2107 120 0 3 chr20 64910043 64910342 -1757663 - AluSq SINE Alu -15 298 1 855 180 17 39 chr20 64911538 64911716 -1756289 + FRAM SINE Alu 1 40 0 426 274 109 84 chr20 64911716 64911822 -1756183 + L1M4 LINE L1 2816 2918 -3228 2096 101 14 0 chr20 64911822 64912119 -1755886 + AluSp SINE Alu 1 301 -12 426 274 109 84 chr20 64912119 64912380 -1755625 + L1M4 LINE L1 2918 3192 -2954 1218 78 0 0 chr20 64912647 64912801 -1755204 + AluSx SINE Alu 1 154 -158 218 311 113 23 chr20 64912823 64913000 -1755005 - L2 LINE L2 -1454 1860 1668 2080 92 10 3 chr20 64913378 64913670 -1754335 + AluSx SINE Alu 1 294 -18 995 92 15 0 chr20 64913675 64913806 -1754199 + AluSg SINE Alu 1 133 -177 1918 118 21 7 chr20 64913806 64914094 -1753911 + AluSx SINE Alu 1 292 -20 490 268 92 4 chr20 64914094 64914282 -1753723 + L1MC4 LINE L1 7834 8037 -5 292 316 66 0 chr20 64914305 64914457 -1753548 + L1MC4 LINE L1 7512 7673 -369 360 162 0 59 chr20 64914500 64914596 -1753409 + AluJo SINE Alu 1 130 -172 1742 154 21 0 chr20 64914596 64914911 -1753094 + AluJb SINE Alu 1 321 0 360 162 0 59 chr20 64914911 64914932 -1753073 + AluJo SINE Alu 130 151 -151 2012 95 21 3 chr20 64916740 64917024 -1750981 - AluSx SINE Alu -23 289 1 1812 130 3 59 chr20 64918247 64918570 -1749435 - AluJb SINE Alu -7 305 1 221 433 0 0 chr20 64919791 64919895 -1748110 - MIR SINE MIR 0 262 159 238 328 0 0 chr20 64919921 64919982 -1748023 + L2 LINE L2 3209 3269 -3 1356 177 62 17 chr20 64920077 64920365 -1747640 - AluJo SINE Alu -11 301 1 2116 92 3 0 chr20 64920405 64920717 -1747288 + AluSp SINE Alu 2 314 0 2304 89 0 13 chr20 64920888 64921201 -1746804 + AluSg SINE Alu 1 309 -1 2402 55 0 7 chr20 64921342 64921649 -1746356 + AluY SINE Alu 1 305 -6 1489 251 136 2 chr20 64921690 64922175 -1745830 + MER68 LTR ERV1 13 562 0 1813 143 43 3 chr20 64924628 64924928 -1743077 - AluSx SINE Alu 0 312 1 222 254 0 0 chr20 64925861 64925916 -1742089 + C-rich Low_complexity Low_complexity 3 57 0 38 51 0 0 chr20 64925950 64926009 -1741996 + GC_rich Low_complexity Low_complexity 1 59 0 33 73 0 0 chr20 64926277 64926345 -1741660 + GC_rich Low_complexity Low_complexity 1 68 0 28 105 0 0 chr20 64926481 64926586 -1741419 + GC_rich Low_complexity Low_complexity 1 105 0 209 162 40 40 chr20 64926591 64926665 -1741340 + (CGCGG)n Simple_repeat Simple_repeat 1 74 0 216 169 11 34 chr20 64926783 64926872 -1741133 + C-rich Low_complexity Low_complexity 3 89 0 2369 71 0 0 chr20 64927197 64927493 -1740512 + AluSg SINE Alu 1 296 -14 398 214 107 0 chr20 64927568 64927680 -1740325 - L1MB8 LINE L1 -160 6018 5895 1011 288 77 73 chr20 64927966 64928180 -1739825 + L1MEc LINE L1 1083 1295 -5101 2177 115 0 3 chr20 64928180 64928492 -1739513 + AluSx SINE Alu 2 312 0 1011 288 77 73 chr20 64928492 64928603 -1739402 + L1MEc LINE L1 1295 1404 -4992 2049 136 3 3 chr20 64928603 64928911 -1739094 - AluSx SINE Alu -4 308 1 1011 288 77 73 chr20 64928911 64928953 -1739052 + L1MEc LINE L1 1404 1444 -4952 207 0 0 0 chr20 64928953 64928976 -1739029 + (CA)n Simple_repeat Simple_repeat 2 24 0 1011 288 77 73 chr20 64928976 64929016 -1738989 + L1MEc LINE L1 1444 1482 -4914 1979 113 0 13 chr20 64929016 64929317 -1738688 + AluSc SINE Alu 1 297 -12 1011 288 77 73 chr20 64929317 64929418 -1738587 + L1MEc LINE L1 1482 1581 -4815 1740 167 43 58 chr20 64929418 64929613 -1738392 - MER2 DNA MER2_type -2 342 153 1656 168 0 27 chr20 64929613 64929905 -1738100 - AluJo SINE Alu -25 287 4 1740 167 43 58 chr20 64929905 64930056 -1737949 - MER2 DNA MER2_type -191 153 1 1011 288 77 73 chr20 64930056 64930241 -1737764 + L1MEc LINE L1 1581 1783 -4613 387 268 27 0 chr20 64930234 64930346 -1737659 + L1MEc LINE L1 2017 2131 -4265 * 293 214 86 0 chr20 64930365 64930435 -1737570 + AluJ/FRAM SINE Alu 224 299 -3 596 247 124 41 chr20 64930456 64930625 -1737380 + L1MEc LINE L1 2156 2310 -4086 2148 65 0 4 chr20 64930625 64930904 -1737101 + AluY SINE Alu 1 278 -33 596 247 124 41 chr20 64930904 64931025 -1736980 + L1MEc LINE L1 2310 2470 -3926 303 273 157 0 chr20 64931064 64931185 -1736820 + L1MEc LINE L1 2419 2558 -3657 2143 116 0 0 chr20 64931186 64931511 -1736494 + AluSx SINE Alu 1 325 0 2138 98 3 7 chr20 64931521 64931818 -1736187 + AluSg SINE Alu 1 296 -14 2022 123 0 43 chr20 64931820 64932144 -1735861 + AluSx SINE Alu 3 312 0 2492 257 60 48 chr20 64932145 64932727 -1735278 + L1MEc LINE L1 2659 3232 -2983 2326 82 0 7 chr20 64932727 64933033 -1734972 + AluSx SINE Alu 1 304 -8 2492 257 60 48 chr20 64933033 64933168 -1734837 + L1MEc LINE L1 3232 3364 -2851 1689 183 7 7 chr20 64933168 64933468 -1734537 + AluJb SINE Alu 5 304 -8 2492 257 60 48 chr20 64933468 64933880 -1734125 + L1MEc LINE L1 3364 3803 -2412 1602 168 9 40 chr20 64933882 64934203 -1733802 - AluJo SINE Alu -1 311 1 2254 102 3 0 chr20 64934208 64934511 -1733494 - AluSg SINE Alu -6 304 1 2044 114 0 3 chr20 64934537 64934826 -1733179 + AluSx SINE Alu 22 309 -3 700 186 22 16 chr20 64934826 64935009 -1732996 + L1MEc LINE L1 4482 4665 -1550 1736 203 24 48 chr20 64935013 64935295 -1732710 - MLT1A1 LTR MaLR 0 365 93 2315 96 0 6 chr20 64935295 64935609 -1732396 - AluSx SINE Alu 0 312 1 1736 203 24 48 chr20 64935609 64935700 -1732305 - MLT1A1 LTR MaLR -272 93 1 323 257 20 0 chr20 64935756 64935857 -1732148 + MLT2F LTR ERVL 238 340 -323 2075 105 0 7 chr20 64936104 64936425 -1731580 - AluSx SINE Alu 0 319 1 2031 93 33 23 chr20 64936428 64936730 -1731275 - AluSg SINE Alu -5 305 1 447 160 126 42 chr20 64936734 64936853 -1731152 - FLAM_C SINE Alu 0 133 5 2136 114 0 0 chr20 64937535 64937825 -1730180 - AluSg SINE Alu -20 290 1 1659 292 131 88 chr20 64938233 64938468 -1729537 + ERVL LTR ERVL 376 599 -5165 8204 55 17 1 chr20 64938468 64939459 -1728546 + LTR13 LTR ERVK 1 1007 0 1659 292 131 88 chr20 64939459 64940146 -1727859 + ERVL LTR ERVL 599 1255 -4509 1188 89 0 0 chr20 64940146 64940326 -1727679 + (CCCCCA)n Simple_repeat Simple_repeat 1 180 0 1659 292 131 88 chr20 64940326 64941187 -1726818 + ERVL LTR ERVL 1255 2237 -3527 210 366 8 8 chr20 64944249 64944383 -1723622 + C-rich Low_complexity Low_complexity 1 134 0 210 402 0 0 chr20 64944421 64944518 -1723487 + (CCCCAG)n Simple_repeat Simple_repeat 2 98 0 2284 95 0 3 chr20 64947835 64948141 -1719864 - AluSx SINE Alu -5 307 3 2073 109 7 17 chr20 64948330 64948464 -1719541 + AluSg SINE Alu 1 135 -175 2405 74 0 6 chr20 64948464 64948775 -1719230 + AluSc SINE Alu 1 309 0 2073 109 7 17 chr20 64948775 64948942 -1719063 + AluSg SINE Alu 135 299 -11 216 229 14 29 chr20 64953573 64953643 -1714362 + (CA)n Simple_repeat Simple_repeat 2 70 0 527 54 27 0 chr20 64956682 64956756 -1711249 - AluSg/x SINE Alu -17 292 217 1641 163 89 0 chr20 64957952 64958222 -1709783 - AluJb SINE Alu -18 294 1 2353 97 3 7 chr20 64969417 64969727 -1698278 + AluSx SINE Alu 1 309 -3 375 289 239 13 chr20 64972494 64972799 -1695206 + MLT1E1 LTR MaLR 8 381 -273 421 183 8 87 chr20 64972801 64972903 -1695102 - MER53 DNA DNA -1 188 96 2096 125 3 7 chr20 64972903 64973200 -1694805 - AluJo SINE Alu -16 296 1 421 183 8 87 chr20 64973200 64973223 -1694782 - MER53 DNA DNA -93 96 73 372 246 160 27 chr20 64973221 64973408 -1694597 + MLT1E1 LTR MaLR 437 648 -6 * 888 188 0 6 chr20 64973632 64973792 -1694213 + FRAM SINE Alu 1 159 -7 401 211 198 48 chr20 64977080 64977307 -1690698 + MLT1H1 LTR MaLR 295 555 0 358 57 0 0 chr20 64977345 64977398 -1690607 - AluSc SINE Alu -1 298 246 2322 107 16 0 chr20 64977669 64977977 -1690028 + AluSq SINE Alu 1 313 0 279 161 18 0 chr20 64978781 64978837 -1689168 + MER2 DNA MER2_type 97 153 -192 21 36 0 0 chr20 64978866 64978894 -1689111 + AT_rich Low_complexity Low_complexity 1 28 0 340 265 0 0 chr20 64978913 64978981 -1689024 + MER2 DNA MER2_type 269 336 -9 482 176 118 66 chr20 64980114 64980250 -1687755 + AluJb SINE Alu 3 145 -167 1626 184 7 29 chr20 64980403 64980712 -1687293 - AluJo SINE Alu -10 302 1 2442 249 147 18 chr20 64981342 64981961 -1686044 - Charlie1a DNA MER1_type -1308 1453 915 1620 135 0 80 chr20 64981961 64982250 -1685755 - AluJb SINE Alu -46 266 1 2442 249 147 18 chr20 64982250 64982719 -1685286 - Charlie1a DNA MER1_type -1846 915 225 311 294 42 56 chr20 64982735 64982878 -1685127 - Charlie1a DNA MER1_type -1311 144 4 568 203 24 16 chr20 64983231 64983354 -1684651 - AluJb SINE Alu -53 259 136 2302 85 31 3 chr20 64984185 64984478 -1683527 + AluSq SINE Alu 1 301 -12 796 254 188 22 chr20 64985530 64985816 -1682189 + Charlie1b DNA MER1_type 2 239 -2522 2253 100 7 7 chr20 64985816 64986115 -1681890 - AluSx SINE Alu -13 299 1 796 254 188 22 chr20 64986115 64986276 -1681729 + Charlie1b DNA MER1_type 239 523 0 1080 125 24 30 chr20 64986552 64986720 -1681285 - AluJb SINE Alu -11 301 135 321 158 21 60 chr20 64986743 64987030 -1680975 + (TA)n Simple_repeat Simple_repeat 1 275 0 265 276 23 0 chr20 64987043 64987130 -1680875 - L1MC4 LINE L1 -1339 6703 6615 303 175 0 0 chr20 64987139 64987196 -1680809 + (CA)n Simple_repeat Simple_repeat 2 58 0 683 192 0 46 chr20 64987941 64988092 -1679913 - FRAM SINE Alu -32 144 1 2193 111 17 3 chr20 64988096 64988393 -1679612 - AluSx SINE Alu -11 301 1 185 250 97 14 chr20 64990129 64990201 -1677804 + L2 LINE L2 3143 3220 -52 240 35 0 0 chr20 64991166 64991195 -1676810 + (CCCG)n Simple_repeat Simple_repeat 4 32 0 24 0 0 0 chr20 64991439 64991463 -1676542 + GC_rich Low_complexity Low_complexity 1 24 0 1897 71 139 29 chr20 64994872 64995152 -1672853 + AluSx SINE Alu 2 312 0 1865 142 30 7 chr20 64995859 64996154 -1671851 - AluJb SINE Alu -10 302 1 597 180 25 8 chr20 64996967 64997089 -1670916 - FLAM_C SINE Alu -14 129 6 701 162 8 0 chr20 64997131 64997248 -1670757 + AluJb SINE Alu 2 119 -193 24 53 0 0 chr20 64997337 64997375 -1670630 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr20 64997624 64997648 -1670357 + AT_rich Low_complexity Low_complexity 1 24 0 2344 101 7 0 chr20 64997850 64998156 -1669849 + AluSp SINE Alu 1 308 -5 1478 180 24 4 chr20 64998515 64998765 -1669240 + AluJb SINE Alu 9 263 -49 366 289 15 78 chr20 64999254 64999458 -1668547 + L2 LINE L2 2285 2475 -839 238 292 164 31 chr20 65000383 65000609 -1667396 - L2 LINE L2 -168 3104 2849 774 117 0 29 chr20 65001050 65001187 -1666818 + FLAM_C SINE Alu 1 133 0 2187 113 7 7 chr20 65001191 65001501 -1666504 + AluSq SINE Alu 1 310 -3 2309 81 7 0 chr20 65001503 65001801 -1666204 + AluSg SINE Alu 1 300 -10 350 229 211 0 chr20 65001876 65001985 -1666020 - Charlie2a DNA MER1_type -1209 1653 1522 22 35 0 0 chr20 65002312 65002341 -1665664 + GC_rich Low_complexity Low_complexity 1 29 0 302 121 0 17 chr20 65003012 65003070 -1664935 + (CCCCCG)n Simple_repeat Simple_repeat 2 58 0 37 52 0 0 chr20 65003180 65003238 -1664767 + GC_rich Low_complexity Low_complexity 1 58 0 1762 116 98 4 chr20 65003781 65004058 -1663947 + AluJo SINE Alu 1 303 -9 409 331 118 24 chr20 65004156 65004648 -1663357 + L2 LINE L2 2036 2573 -741 1454 79 0 0 chr20 65005093 65005271 -1662734 - AluY SINE Alu -1 310 133 2630 40 0 0 chr20 65005271 65005568 -1662437 - AluY SINE Alu -14 297 1 337 242 71 20 chr20 65005576 65005675 -1662330 - L1ME2 LINE L1 -279 5885 5782 622 264 130 14 chr20 65005678 65005962 -1662043 + MER46C DNA MER2_type 6 322 -16 340 344 28 38 chr20 65005976 65006188 -1661817 - L1ME2 LINE L1 -389 5781 5572 1639 174 24 17 chr20 65007091 65007379 -1660626 + AluJb SINE Alu 1 290 -22 2040 117 31 0 chr20 65008756 65009046 -1658959 - AluSx SINE Alu -13 299 1 192 239 22 0 chr20 65009499 65009545 -1658460 + L2 LINE L2 3149 3195 -77 27 0 0 0 chr20 65010429 65010456 -1657549 + AT_rich Low_complexity Low_complexity 1 27 0 235 218 0 18 chr20 65016355 65016410 -1651595 + L2 LINE L2 3171 3224 -89 181 209 0 47 chr20 65017256 65017299 -1650706 - MIR SINE MIR -96 166 126 1675 165 14 10 chr20 65019888 65020043 -1647962 - AluJb SINE Alu -20 292 139 2206 87 0 47 chr20 65020043 65020365 -1647640 - AluSg SINE Alu -3 307 1 1675 165 14 10 chr20 65020365 65020381 -1647624 - AluJb SINE Alu -173 139 125 222 62 0 0 chr20 65020381 65020413 -1647592 + (TTTTG)n Simple_repeat Simple_repeat 5 36 0 1675 165 14 10 chr20 65020413 65020531 -1647474 - AluJb SINE Alu -187 125 1 326 302 4 11 chr20 65022560 65022839 -1645166 + (CGTG)n Simple_repeat Simple_repeat 1 276 0 215 328 6 0 chr20 65022900 65023071 -1644934 + (TG)n Simple_repeat Simple_repeat 1 172 0 400 244 73 16 chr20 65032901 65033024 -1634981 - MER20 DNA MER1_type -57 162 33 462 252 75 0 chr20 65033550 65033697 -1634308 - LTR37A LTR ERV1 -52 374 217 1647 214 42 7 chr20 65034135 65034541 -1633464 - L1MB3 LINE L1 -17 6166 5747 2255 100 0 0 chr20 65034569 65034878 -1633127 - AluSx SINE Alu -3 309 1 1461 171 112 4 chr20 65034888 65035157 -1632848 - AluJb SINE Alu -14 298 1 267 172 16 65 chr20 65036350 65036536 -1631469 + (TG)n Simple_repeat Simple_repeat 2 178 0 507 214 15 33 chr20 65036581 65037340 -1630665 + (TG)n Simple_repeat Simple_repeat 1 745 0 2355 53 0 0 chr20 65038597 65038903 -1629102 - AluY SINE Alu 0 306 1 517 167 194 36 chr20 65039991 65040201 -1627804 + MLT1G1 LTR MaLR 10 312 -283 1045 211 132 38 chr20 65041264 65041321 -1626684 - MLT1B LTR MaLR -17 373 323 1785 156 23 13 chr20 65041321 65041629 -1626376 + AluJo SINE Alu 1 311 -1 1045 211 132 38 chr20 65041629 65041912 -1626093 - MLT1B LTR MaLR -67 323 1 229 257 57 0 chr20 65042097 65042202 -1625803 + LTR16A LTR ERVL 233 343 -107 222 171 0 0 chr20 65046267 65046308 -1621697 + C-rich Low_complexity Low_complexity 1 41 0 189 239 333 11 chr20 65048178 65048358 -1619647 + L2 LINE L2 2851 3088 -184 1018 105 98 0 chr20 65048568 65048721 -1619284 - AluJb SINE Alu -13 299 132 1108 228 43 0 chr20 65048722 65048847 -1619158 - L1MB5 LINE L1 -38 6136 6012 280 366 66 9 chr20 65048847 65049060 -1618945 - L1MD2 LINE L1 -355 6004 5780 362 251 22 49 chr20 65051381 65051564 -1616441 + (TGGG)n Simple_repeat Simple_repeat 1 178 0 338 296 0 28 chr20 65051495 65051637 -1616368 + (CGGG)n Simple_repeat Simple_repeat 2 139 0 * 202 250 19 0 chr20 65051953 65052005 -1616000 - MIR SINE MIR -61 147 95 1980 128 0 10 chr20 65052883 65053214 -1614791 - AluSx SINE Alu 0 312 1 406 210 251 40 chr20 65053255 65053372 -1614633 + MLT1F1 LTR MaLR 1 92 -450 2333 93 0 7 chr20 65053372 65053682 -1614323 + AluSx SINE Alu 1 308 -4 406 210 251 40 chr20 65053682 65053872 -1614133 + MLT1F1 LTR MaLR 92 447 -95 364 200 120 0 chr20 65053882 65053982 -1614023 + MLT1G1 LTR MaLR 381 492 -75 3223 154 26 22 chr20 65053982 65054606 -1613399 + MER41B LTR ERV1 2 627 -8 545 254 90 11 chr20 65056125 65056302 -1611703 - MLT1C LTR MaLR -4 463 273 2135 152 105 5 chr20 65056812 65057201 -1610804 + MSTA LTR MaLR 1 428 0 1119 135 0 22 chr20 65057211 65057389 -1610616 - FRAM SINE Alu -2 174 1 856 200 29 11 chr20 65057891 65058066 -1609939 + MER45A DNA AcHobo 1 178 0 417 238 0 33 chr20 65058242 65058423 -1609582 + GA-rich Low_complexity Low_complexity 1 175 0 456 222 0 32 chr20 65058451 65058636 -1609369 + GA-rich Low_complexity Low_complexity 1 179 0 244 223 15 62 chr20 65058592 65058722 -1609283 + G-rich Low_complexity Low_complexity 2 125 0 * 403 237 9 18 chr20 65058722 65058836 -1609169 + MER53 DNA DNA 1 113 -76 380 293 237 0 chr20 65060477 65060709 -1607296 + L1ME1 LINE L1 5872 6158 -8 421 279 18 0 chr20 65060728 65060839 -1607166 + L1MB4 LINE L1 6043 6155 -25 2111 102 13 22 chr20 65061943 65062257 -1605748 - AluSx SINE Alu -1 311 1 225 286 110 0 chr20 65062397 65062488 -1605517 + MER46C DNA MER2_type 34 134 -204 477 286 34 6 chr20 65063293 65063468 -1604537 + (CA)n Simple_repeat Simple_repeat 1 180 0 419 203 28 11 chr20 65063487 65063664 -1604341 + (CA)n Simple_repeat Simple_repeat 1 180 0 190 154 0 39 chr20 65063974 65064026 -1603979 + G-rich Low_complexity Low_complexity 1 50 0 2481 70 0 6 chr20 65066571 65066883 -1601122 + AluSg SINE Alu 1 310 0 1930 134 27 0 chr20 65067166 65067458 -1600547 + AluSg SINE Alu 1 300 -10 225 108 0 0 chr20 65067634 65067671 -1600334 + (CCCCAG)n Simple_repeat Simple_repeat 3 39 0 756 226 80 44 chr20 65067869 65068144 -1599861 + MER33 DNA MER1_type 27 311 -13 1857 125 7 21 chr20 65068255 65068569 -1599436 + AluSx SINE Alu 1 310 0 24 53 0 0 chr20 65069319 65069357 -1598648 + AT_rich Low_complexity Low_complexity 1 38 0 267 282 13 26 chr20 65071311 65071467 -1596538 + (CCG)n Simple_repeat Simple_repeat 2 155 0 231 195 0 0 chr20 65071815 65071856 -1596149 + CT-rich Low_complexity Low_complexity 1 41 0 191 61 30 0 chr20 65072044 65072077 -1595928 + (CGCGG)n Simple_repeat Simple_repeat 1 34 0 23 33 0 0 chr20 65072107 65072137 -1595868 + GC_rich Low_complexity Low_complexity 1 30 0 188 67 33 0 chr20 65073884 65073914 -1594091 + (CTGGGG)n Simple_repeat Simple_repeat 5 35 0 278 175 53 0 chr20 65074515 65074572 -1593433 + MIR SINE MIR 86 145 -117 831 299 40 0 chr20 65075182 65075460 -1592545 - L1MB3 LINE L1 -16 6167 5879 454 239 10 0 chr20 65075526 65075664 -1592341 - L1MB3 LINE L1 -570 5598 5476 2540 43 0 0 chr20 65075664 65075967 -1592038 - AluY SINE Alu 0 311 9 6879 88 1 1 chr20 65075967 65076944 -1591061 + PRIMA41-int LTR ERV1 5494 6470 -1286 1514 104 4 17 chr20 65076949 65077190 -1590815 + PRIMA41-int LTR ERV1 7288 7525 -231 2293 98 3 0 chr20 65077190 65077495 -1590510 - AluSx SINE Alu -2 310 5 2183 207 83 5 chr20 65077569 65078133 -1589872 - L1MCa LINE L1 -5815 611 4 680 317 70 25 chr20 65078124 65078808 -1589197 - L1MEd LINE L1 -4862 1554 840 * 231 88 0 0 chr20 65078824 65078858 -1589147 - L1MEd LINE L1 -6145 281 248 443 311 209 6 chr20 65079348 65079663 -1588342 + L2 LINE L2 2053 2431 -883 313 335 120 14 chr20 65080594 65080803 -1587202 + L1M2a LINE L1 1009 1239 -5929 206 247 0 11 chr20 65080889 65080978 -1587027 + (CCCCG)n Simple_repeat Simple_repeat 1 88 0 339 286 78 26 chr20 65081216 65081408 -1586597 + MLT1H1 LTR MaLR 354 555 0 318 304 63 0 chr20 65081455 65081613 -1586392 - Tigger5 DNA MER2_type -5 2318 2151 302 289 51 39 chr20 65083389 65083545 -1584460 - L1M4 LINE L1 -1574 4572 4415 216 97 0 0 chr20 65083646 65083677 -1584328 + (TTCC)n Simple_repeat Simple_repeat 3 33 0 2216 107 13 0 chr20 65083681 65083989 -1584016 - AluSx SINE Alu 0 312 1 234 169 46 0 chr20 65084103 65084168 -1583837 + (CCCG)n Simple_repeat Simple_repeat 4 71 0 414 189 33 57 chr20 65084172 65084294 -1583711 - L1MEc LINE L1 -4451 1945 1827 828 116 39 0 chr20 65084298 65084427 -1583578 - AluJb SINE Alu -178 134 1 2027 289 161 10 chr20 65084440 65084960 -1583045 - L1MEc LINE L1 -4578 1818 1378 1906 141 7 7 chr20 65084960 65085259 -1582746 - AluSx SINE Alu -13 299 1 2027 289 161 10 chr20 65085259 65086249 -1581756 - L1MEc LINE L1 -5018 1378 80 226 178 22 0 chr20 65087750 65087795 -1580210 + MLT1K LTR MaLR 539 584 -4 * 350 272 97 61 chr20 65087771 65087999 -1580006 - MLT1K LTR MaLR -23 565 330 200 317 58 19 chr20 65088298 65088402 -1579603 - L2 LINE L2 -174 3098 2991 958 216 62 29 chr20 65091236 65091608 -1576397 - MLT1C LTR MaLR -10 457 3 295 287 148 0 chr20 65092096 65092211 -1575794 - MER45A DNA AcHobo 0 178 47 312 301 111 4 chr20 65092399 65092636 -1575369 - L1MB8 LINE L1 -10 6164 5893 289 274 8 0 chr20 65092946 65093063 -1574942 + G-rich Low_complexity Low_complexity 2 119 0 2415 66 7 0 chr20 65095861 65096164 -1571841 + AluSp SINE Alu 1 305 -8 429 276 39 0 chr20 65097669 65097796 -1570209 + MER45B DNA AcHobo 51 182 -858 584 249 116 27 chr20 65097851 65098380 -1569625 + MER45B DNA AcHobo 364 1015 -25 243 232 16 72 chr20 65100645 65100770 -1567235 + (CAGGG)n Simple_repeat Simple_repeat 2 119 0 1319 289 46 77 chr20 65101483 65102315 -1565690 - L1M4c LINE L1 -1581 4801 3996 914 166 51 0 chr20 65102315 65102472 -1565533 + AluJb SINE Alu 134 298 -14 1015 228 54 0 chr20 65102508 65102767 -1565238 - L1MB4 LINE L1 -54 6126 5854 1261 262 55 0 chr20 65102934 65103300 -1564705 - L1MB4 LINE L1 -302 5878 5493 1320 127 5 0 chr20 65103300 65103497 -1564508 - AluSg/x SINE Alu -1 309 112 5002 203 36 30 chr20 65103498 65103768 -1564237 - L1MB4 LINE L1 -711 5469 5202 2557 52 0 0 chr20 65103768 65104078 -1563927 - AluY SINE Alu -1 310 1 5002 203 36 30 chr20 65104078 65104164 -1563841 - L1MB4 LINE L1 -978 5202 5118 2154 119 0 0 chr20 65104164 65104459 -1563546 - AluSx SINE Alu -17 295 1 5002 203 36 30 chr20 65104459 65105564 -1562441 - L1MB4 LINE L1 -1062 5118 4005 3693 271 67 25 chr20 65105552 65106467 -1561538 - L1M4c LINE L1 -2368 4014 3139 * 2067 136 0 13 chr20 65106467 65106775 -1561230 - AluSx SINE Alu -8 304 1 233 194 65 16 chr20 65106728 65106790 -1561215 - AluSg/x SINE Alu -120 180 116 * 3693 271 67 25 chr20 65106775 65107714 -1560291 - L1M4c LINE L1 -3243 3139 2076 1197 210 42 93 chr20 65110922 65111307 -1556698 + MLT1A1 LTR MaLR 1 365 0 343 343 77 36 chr20 65112149 65112397 -1555608 - L1ME3A LINE L1 -257 5913 5656 1383 251 180 0 chr20 65112867 65113357 -1554648 - MER77 LTR ERV1 -26 579 2 1300 67 11 4 chr20 65113984 65114253 -1553752 + (TCC)n Simple_repeat Simple_repeat 1 271 0 206 176 39 0 chr20 65117434 65117485 -1550520 + GA-rich Low_complexity Low_complexity 3 55 0 319 188 94 10 chr20 65118107 65118203 -1549802 + LTR33 LTR ERVL 39 142 -379 181 338 15 0 chr20 65118387 65118455 -1549550 - L2 LINE L2 -13 3259 3191 1029 245 54 24 chr20 65119125 65119497 -1548508 - MLT1C LTR MaLR -32 435 53 710 210 17 0 chr20 65121861 65122216 -1545789 + (TTCA)n Simple_repeat Simple_repeat 1 361 0 399 236 36 18 chr20 65122216 65122326 -1545679 + (CTCA)n Simple_repeat Simple_repeat 3 114 0 711 216 15 7 chr20 65122327 65122735 -1545270 + (TTCA)n Simple_repeat Simple_repeat 1 411 0 374 230 0 35 chr20 65122736 65122910 -1545095 + (CTCA)n Simple_repeat Simple_repeat 2 169 0 1770 154 3 7 chr20 65124310 65124624 -1543381 - AluSx SINE Alu 0 313 1 492 63 0 105 chr20 65126042 65126300 -1541705 + (TCCTG)n Simple_repeat Simple_repeat 1 230 0 417 71 0 107 chr20 65126403 65126599 -1541406 + (TCCTG)n Simple_repeat Simple_repeat 3 177 0 185 16 0 115 chr20 65126613 65126674 -1541331 + (TCCTG)n Simple_repeat Simple_repeat 3 56 0 506 32 0 116 chr20 65126687 65126877 -1541128 + (TCCTG)n Simple_repeat Simple_repeat 5 172 0 442 45 0 124 chr20 65126899 65127101 -1540904 + (TCCTG)n Simple_repeat Simple_repeat 4 180 0 187 208 94 0 chr20 65127548 65127601 -1540404 + L2 LINE L2 3066 3123 -149 3847 207 41 8 chr20 65127677 65128232 -1539773 - L1MB3 LINE L1 0 6183 5648 252 0 68 23 chr20 65128232 65128276 -1539729 + (TTTTG)n Simple_repeat Simple_repeat 1 46 0 2045 111 0 0 chr20 65128276 65128555 -1539450 - AluSg SINE Alu -31 279 1 3847 207 41 8 chr20 65128555 65129091 -1538914 - L1MB3 LINE L1 -534 5649 5058 234 219 0 0 chr20 65133050 65133114 -1534891 + (TTCA)n Simple_repeat Simple_repeat 4 67 0 1987 123 16 16 chr20 65134125 65134434 -1533571 - AluSx SINE Alu -3 309 1 201 74 0 0 chr20 65135456 65135483 -1532522 + (TTTTC)n Simple_repeat Simple_repeat 3 29 0 849 131 15 0 chr20 65135488 65135618 -1532387 - FLAM_C SINE Alu -1 132 1 187 269 51 137 chr20 65136029 65136204 -1531801 + MIR SINE MIR 1 160 -102 243 280 0 59 chr20 65136890 65137076 -1530929 + C-rich Low_complexity Low_complexity 5 179 0 22 88 0 0 chr20 65137239 65137296 -1530709 + GC_rich Low_complexity Low_complexity 1 57 0 1702 183 0 7 chr20 65139173 65139479 -1528526 + AluJb SINE Alu 1 304 -8 251 289 70 26 chr20 65139580 65139694 -1528311 - MLT1G1 LTR MaLR -39 556 438 306 248 89 10 chr20 65139733 65139834 -1528171 - MLT1G1 LTR MaLR -273 322 214 3883 181 54 23 chr20 65139855 65140818 -1527187 - L1MB3 LINE L1 -10 6409 5413 1607 158 39 21 chr20 65140818 65141103 -1526902 + AluJo SINE Alu 1 290 -22 3883 181 54 23 chr20 65141103 65141239 -1526766 - L1MB3 LINE L1 -1006 5413 5283 1962 155 53 27 chr20 65141239 65141652 -1526353 - MSTB1 LTR MaLR 0 432 9 5096 199 38 10 chr20 65141665 65142984 -1525021 - L1MB3 LINE L1 -1097 5285 3930 * 5144 166 42 10 chr20 65142969 65144519 -1523486 - L1MB3 LINE L1 -3322 3060 1464 1261 201 127 12 chr20 65144763 65145172 -1522833 + MLT1C LTR MaLR 6 461 -6 434 313 78 0 chr20 65145243 65145422 -1522583 - L2 LINE L2 -1511 1803 1611 471 268 91 42 chr20 65147563 65147828 -1520177 + LTR16C LTR ERVL 197 474 -17 216 226 0 0 chr20 65150957 65151019 -1516986 + (TG)n Simple_repeat Simple_repeat 2 63 0 499 245 71 49 chr20 65154676 65154860 -1513145 - MER20 DNA MER1_type -7 212 25 307 150 0 0 chr20 65155285 65155299 -1512706 - AluJ/FLAM SINE Alu -242 60 47 2137 105 0 10 chr20 65155299 65155603 -1512402 - AluY SINE Alu -8 303 3 307 150 0 0 chr20 65155603 65155648 -1512357 - AluJ/FLAM SINE Alu -254 48 1 2221 108 0 0 chr20 65158552 65158849 -1509156 + AluSx SINE Alu 1 297 -15 399 244 0 0 chr20 65159932 65160022 -1507983 - MER53 DNA DNA -85 104 15 638 203 145 32 chr20 65160175 65160429 -1507576 + MLT1D LTR MaLR 116 458 -47 601 146 0 36 chr20 65160429 65160539 -1507466 - L1MA3 LINE L1 0 6305 6200 638 203 145 32 chr20 65160539 65160583 -1507422 + MLT1D LTR MaLR 458 496 -9 207 100 0 0 chr20 65160682 65160712 -1507293 + (CTTG)n Simple_repeat Simple_repeat 2 31 0 2295 84 0 3 chr20 65162947 65163246 -1504759 - AluSg SINE Alu -8 302 5 685 175 25 2 chr20 65163493 65164038 -1503967 + (TGGA)n Simple_repeat Simple_repeat 1 557 0 203 333 0 0 chr20 65164825 65164891 -1503114 + GA-rich Low_complexity Low_complexity 2 67 0 1109 117 9 0 chr20 65166476 65166699 -1501306 + (TC)n Simple_repeat Simple_repeat 1 225 0 180 231 0 0 chr20 65166762 65166814 -1501191 + (TG)n Simple_repeat Simple_repeat 1 52 0 382 134 47 35 chr20 65168223 65168395 -1499610 + GA-rich Low_complexity Low_complexity 1 174 0 583 180 163 0 chr20 65169171 65169343 -1498662 + MER58 DNA MER1_type 34 233 -2187 373 250 26 26 chr20 65171431 65171547 -1496458 + MLT1D LTR MaLR 1 116 -389 267 250 43 11 chr20 65171543 65171635 -1496370 + MLT1D LTR MaLR 52 146 -359 * 699 206 167 0 chr20 65171719 65171976 -1496029 + MLT1D LTR MaLR 173 472 -33 1323 209 4 4 chr20 65173183 65173460 -1494545 + MLT1A1 LTR MaLR 2 278 -87 4487 245 60 9 chr20 65173490 65174948 -1493057 - L1M4 LINE L1 -625 5943 4379 2696 139 59 0 chr20 65174948 65175352 -1492653 - MSTA LTR MaLR 0 428 1 4487 245 60 9 chr20 65175352 65175588 -1492417 - L1M4 LINE L1 -2189 4379 4156 530 289 114 23 chr20 65175791 65176134 -1491871 - L1M4 LINE L1 -6152 388 15 1089 321 155 29 chr20 65176335 65177277 -1490728 - L1M4 LINE L1 -1753 4393 3273 2105 129 7 0 chr20 65178404 65178707 -1489298 + AluSx SINE Alu 8 312 0 326 256 220 12 chr20 65179225 65179475 -1488530 - LTR16C LTR ERVL -4 487 186 282 29 0 0 chr20 65180088 65180123 -1487882 + (CA)n Simple_repeat Simple_repeat 1 35 0 445 160 30 8 chr20 65180171 65180302 -1487703 + (CA)n Simple_repeat Simple_repeat 1 134 0 232 242 95 42 chr20 65181166 65181261 -1486744 + L2 LINE L2 3181 3280 -33 465 167 0 24 chr20 65182793 65182877 -1485128 - AluJb SINE Alu -68 244 163 360 231 111 0 chr20 65183012 65183129 -1484876 - L1ME3 LINE L1 -86 6076 5947 734 319 49 0 chr20 65183486 65183812 -1484193 - L1ME3 LINE L1 -417 5749 5408 343 332 115 34 chr20 65186687 65186895 -1481110 + L1MC2 LINE L1 5259 5483 -683 234 288 91 8 chr20 65187167 65187299 -1480706 - MLT1D LTR MaLR 0 505 363 540 227 89 49 chr20 65187378 65187581 -1480424 - MLT1D LTR MaLR -294 211 1 467 227 31 0 chr20 65187913 65188041 -1479964 - L1 LINE L1 -1125 5021 4890 483 141 77 0 chr20 65188058 65188136 -1479869 + FRAM SINE Alu 47 130 -46 264 175 25 12 chr20 65188713 65188793 -1479212 - MER53 DNA DNA 0 189 109 1831 138 55 0 chr20 65188794 65189084 -1478921 - AluSx SINE Alu -6 306 1 259 339 83 0 chr20 65190340 65190461 -1477544 - MIR SINE MIR -72 190 60 1708 221 112 4 chr20 65191361 65191859 -1476146 + L1MC2 LINE L1 5791 6342 -2 1730 214 50 71 chr20 65192636 65193211 -1474794 - L1MB3 LINE L1 -1 6182 5620 361 348 60 26 chr20 65193235 65193468 -1474537 - L1ME3 LINE L1 -192 5970 5730 483 341 89 40 chr20 65194217 65194580 -1473425 - L1 LINE L1 -1450 4696 4303 293 279 0 0 chr20 65195200 65195279 -1472726 + C-rich Low_complexity Low_complexity 1 79 0 2088 148 44 25 chr20 65196585 65196950 -1471055 - THE1C LTR MaLR 0 375 4 250 354 0 0 chr20 65197275 65197371 -1470634 + (CA)n Simple_repeat Simple_repeat 1 96 0 310 218 39 13 chr20 65197578 65197656 -1470349 - MIR SINE MIR -118 144 65 368 292 6 48 chr20 65199552 65199788 -1468217 + G-rich Low_complexity Low_complexity 1 226 0 374 319 18 0 chr20 65199818 65199987 -1468018 + G-rich Low_complexity Low_complexity 2 173 0 399 314 18 0 chr20 65200153 65200322 -1467683 + G-rich Low_complexity Low_complexity 2 173 0 366 328 17 0 chr20 65200343 65200517 -1467488 + G-rich Low_complexity Low_complexity 3 179 0 2121 95 14 0 chr20 65200808 65201091 -1466914 - AluSg SINE Alu -23 287 1 21 36 0 0 chr20 65201598 65201626 -1466379 + AT_rich Low_complexity Low_complexity 1 28 0 3451 210 15 15 chr20 65202074 65202761 -1465244 - L1MB7 LINE L1 -10 6174 5488 2420 247 85 32 chr20 65203561 65204584 -1463421 + L1MD2 LINE L1 5188 6220 -22 269 167 76 0 chr20 65204586 65204652 -1463353 + AluJ/FRAM SINE Alu 219 289 -13 2329 80 0 3 chr20 65205193 65205492 -1462513 - AluSx SINE Alu -14 298 1 192 260 20 0 chr20 65206526 65206576 -1461429 - MIR SINE MIR -115 147 97 2137 280 48 16 chr20 65206830 65207595 -1460410 - L1ME2 LINE L1 -18 6080 5291 5734 137 95 19 chr20 65207643 65208697 -1459308 - HSMAR2 DNA Mariner -1 1301 142 2263 121 0 0 chr20 65208697 65209010 -1458995 - AluSq SINE Alu 0 313 1 5734 137 95 19 chr20 65209010 65209162 -1458843 - HSMAR2 DNA Mariner -1160 142 3 299 205 51 90 chr20 65209185 65209341 -1458664 - L1ME2 LINE L1 -930 5150 5001 566 241 24 6 chr20 65209452 65209618 -1458387 - L1ME2 LINE L1 -2232 3848 3680 990 134 5 85 chr20 65209724 65209947 -1458058 - MER2 DNA MER2_type -135 210 6 319 234 0 0 chr20 65210014 65210078 -1457927 - Tigger5 DNA MER2_type -9 2314 2251 242 186 0 0 chr20 65210078 65210121 -1457884 + Tigger5 DNA MER2_type 2281 2323 0 4119 275 68 39 chr20 65210121 65210231 -1457774 - L1ME2 LINE L1 -2399 3681 3576 892 226 67 5 chr20 65210231 65210426 -1457579 - MER63A DNA MER1_type -3 207 1 4119 275 68 39 chr20 65210426 65213047 -1454958 - L1ME2 LINE L1 -2504 3576 879 315 306 20 41 chr20 65213055 65213153 -1454852 - L1ME2 LINE L1 -5297 773 678 1212 275 65 7 chr20 65213190 65213605 -1454400 - L1MB8 LINE L1 -5 6173 5735 181 364 85 8 chr20 65213725 65213843 -1454162 - MIR SINE MIR -20 242 116 1744 169 0 23 chr20 65214214 65214515 -1453490 - AluJb SINE Alu -13 299 6 522 219 129 9 chr20 65214945 65215173 -1452832 + MLT1C LTR MaLR 1 261 -178 439 160 113 9 chr20 65217463 65217569 -1450436 - MIR SINE MIR -133 129 13 491 285 23 0 chr20 65218292 65218422 -1449583 + MIR SINE MIR 13 145 -117 257 281 12 12 chr20 65219337 65219419 -1448586 + GA-rich Low_complexity Low_complexity 1 82 0 442 136 20 58 chr20 65219566 65219883 -1448122 + CT-rich Low_complexity Low_complexity 1 304 0 327 308 171 14 chr20 65222252 65222398 -1445607 + MER5A DNA MER1_type 21 189 0 2310 94 0 0 chr20 65222585 65222884 -1445121 + AluSg SINE Alu 1 299 -11 237 222 0 0 chr20 65223133 65223196 -1444809 + (TGGA)n Simple_repeat Simple_repeat 1 63 0 587 118 65 18 chr20 65223214 65223384 -1444621 + (TGGA)n Simple_repeat Simple_repeat 2 179 0 409 127 84 0 chr20 65223428 65223594 -1444411 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 375 234 5 0 chr20 65223629 65223725 -1444280 + L1M4 LINE L1 5502 5596 -588 416 252 19 0 chr20 65223822 65223929 -1444076 + L1M4 LINE L1 5600 5708 -470 1375 248 41 55 chr20 65223998 65224425 -1443580 + L1MB7 LINE L1 5673 6093 -91 2294 89 3 0 chr20 65224425 65224729 -1443276 + AluSg SINE Alu 1 305 -5 1375 248 41 55 chr20 65224729 65224814 -1443191 + L1MB7 LINE L1 6093 6178 -6 707 281 91 37 chr20 65226616 65226968 -1441037 + MLT1C LTR MaLR 45 415 -52 247 211 22 78 chr20 65229690 65229780 -1438225 - MER69A DNA AcHobo -85 92 8 269 225 11 0 chr20 65232390 65232479 -1435526 + C-rich Low_complexity Low_complexity 5 94 0 435 339 42 4 chr20 65235902 65236162 -1431843 + MER113 DNA MER1_type? 101 370 -151 401 164 15 47 chr20 65236935 65237284 -1430721 + (CAGAGA)n Simple_repeat Simple_repeat 1 337 0 184 130 43 0 chr20 65237310 65237356 -1430649 + (CAGAGA)n Simple_repeat Simple_repeat 2 49 0 424 237 5 48 chr20 65237377 65237563 -1430442 + (CAGAGA)n Simple_repeat Simple_repeat 3 180 0 187 89 0 44 chr20 65242105 65242150 -1425855 + (GCGTG)n Simple_repeat Simple_repeat 4 46 0 210 118 0 0 chr20 65242511 65242545 -1425460 + (CGG)n Simple_repeat Simple_repeat 3 36 0 27 96 0 0 chr20 65243706 65243789 -1424216 + GC_rich Low_complexity Low_complexity 1 83 0 23 0 0 0 chr20 65243924 65243947 -1424058 + GC_rich Low_complexity Low_complexity 1 23 0 23 54 0 0 chr20 65244064 65244101 -1423904 + GC_rich Low_complexity Low_complexity 1 37 0 291 269 0 0 chr20 65249008 65249116 -1418889 + (CAT)n Simple_repeat Simple_repeat 3 110 0 336 330 0 0 chr20 65249867 65249985 -1418020 + (TG)n Simple_repeat Simple_repeat 1 118 0 277 333 24 0 chr20 65251207 65251330 -1416675 + (TG)n Simple_repeat Simple_repeat 1 126 0 223 283 87 29 chr20 65251372 65251510 -1416495 + L2 LINE L2 2875 3020 -252 376 214 30 0 chr20 65254388 65254556 -1413449 + (CA)n Simple_repeat Simple_repeat 1 173 0 336 171 86 65 chr20 65254626 65254786 -1413219 + L1MC4 LINE L1 7882 7995 0 2317 90 0 3 chr20 65256723 65257033 -1410972 - AluSp SINE Alu -4 309 1 2426 72 0 0 chr20 65257075 65257380 -1410625 - AluY SINE Alu -6 305 1 2526 50 0 0 chr20 65257387 65257689 -1410316 - AluY SINE Alu -9 302 1 2121 132 0 0 chr20 65258347 65258651 -1409354 + AluSq SINE Alu 1 304 -9 501 156 0 0 chr20 65259821 65259898 -1408107 + AluS SINE Alu 3 79 -234 301 336 114 28 chr20 65261021 65261232 -1406773 + L1M4 LINE L1 3129 3357 -2789 1049 127 18 0 chr20 65262518 65262684 -1405321 + FRAM SINE Alu 1 169 -7 1724 149 0 42 chr20 65263070 65263358 -1404647 + AluSx SINE Alu 1 276 -36 2321 92 0 0 chr20 65264157 65264462 -1403543 + AluY SINE Alu 1 305 -6 1779 151 24 3 chr20 65264697 65264989 -1403016 + AluJo SINE Alu 2 299 -13 1948 134 14 0 chr20 65264998 65265288 -1402717 + AluSx SINE Alu 1 294 -18 1007 127 0 0 chr20 65265837 65265979 -1402026 + AluSg/x SINE Alu 154 295 -15 2241 96 0 0 chr20 65270436 65270728 -1397277 - AluSx SINE Alu -20 292 1 2218 71 0 45 chr20 65272108 65272417 -1395588 + AluY SINE Alu 3 297 -14 2022 118 47 0 chr20 65272644 65272940 -1395065 + AluSg SINE Alu 1 310 0 2170 153 99 14 chr20 65273910 65274407 -1393598 - Tigger3b DNA MER2_type -161 1070 532 437 168 51 21 chr20 65274407 65274677 -1393328 + AluJ SINE Alu 1 312 0 2086 157 99 17 chr20 65274677 65275141 -1392864 - Tigger3b DNA MER2_type -705 526 25 2267 87 0 13 chr20 65275421 65275731 -1392274 + AluSp SINE Alu 1 306 -7 1781 175 3 3 chr20 65276101 65276393 -1391612 + AluJo SINE Alu 1 292 -20 1672 174 10 14 chr20 65276591 65276879 -1391126 + AluJo SINE Alu 1 287 -25 432 0 0 0 chr20 65276880 65276928 -1391077 + (CA)n Simple_repeat Simple_repeat 2 49 0 914 195 56 37 chr20 65277644 65277859 -1390146 + MER20 DNA MER1_type 1 219 0 577 248 83 69 chr20 65277887 65278069 -1389936 - MIR SINE MIR -13 249 62 2104 121 0 0 chr20 65278069 65278359 -1389646 + AluSq SINE Alu 1 290 -23 577 248 83 69 chr20 65278359 65278394 -1389611 - MIR SINE MIR -200 62 29 1917 114 131 20 chr20 65279320 65279853 -1388152 - MER4A LTR ERV1 -1 663 1 22 35 0 0 chr20 65280737 65280766 -1387239 + GC_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr20 65280830 65280854 -1387151 + GC_rich Low_complexity Low_complexity 1 24 0 41 26 0 51 chr20 65280892 65280970 -1387035 + GC_rich Low_complexity Low_complexity 1 74 0 267 103 0 0 chr20 65281033 65281072 -1386933 + (CGG)n Simple_repeat Simple_repeat 2 40 0 21 57 0 0 chr20 65281103 65281138 -1386867 + GC_rich Low_complexity Low_complexity 1 35 0 1176 207 169 43 chr20 65283052 65283467 -1384538 - MLT1C LTR MaLR 0 467 1 211 211 27 14 chr20 65285203 65285350 -1382655 + (GAGTG)n Simple_repeat Simple_repeat 5 153 0 216 231 39 0 chr20 65285361 65285439 -1382566 + (GAGTG)n Simple_repeat Simple_repeat 1 81 0 513 218 287 0 chr20 65286814 65287002 -1381003 - MER45C DNA AcHobo -28 925 684 339 225 118 53 chr20 65287054 65287223 -1380782 - MER45C DNA AcHobo -689 264 85 354 284 142 0 chr20 65287903 65288058 -1379947 + MLT1K LTR MaLR 407 583 -5 277 219 260 0 chr20 65288624 65288720 -1379285 + MER3 DNA MER1_type 85 205 -4 2156 163 48 16 chr20 65290022 65290457 -1377548 - MER4C LTR ERV1 0 465 17 2393 79 3 0 chr20 65290458 65290762 -1377243 - AluSp SINE Alu -2 311 7 1954 119 21 7 chr20 65290767 65291053 -1376952 - AluSq SINE Alu -23 290 1 211 279 9 9 chr20 65291433 65291544 -1376461 + CT-rich Low_complexity Low_complexity 2 112 0 1052 209 12 28 chr20 65291948 65292197 -1375808 - MER4E LTR ERV1 -3 776 532 2353 179 38 99 chr20 65292317 65292681 -1375324 - MER4D LTR ERV1 -233 670 285 2164 125 3 0 chr20 65292681 65292993 -1375012 - AluSp SINE Alu 0 313 1 2133 100 10 3 chr20 65292997 65293297 -1374708 - AluSx SINE Alu -10 302 1 2353 179 38 99 chr20 65293297 65293432 -1374573 - MER4D LTR ERV1 -621 282 220 1714 151 23 20 chr20 65293432 65293736 -1374269 - AluJb SINE Alu -7 305 1 2353 179 38 99 chr20 65293736 65293944 -1374061 - MER4D LTR ERV1 -683 220 1 267 311 4 15 chr20 65293944 65294094 -1373911 + LTR48B LTR ERV1 31 219 -410 573 315 51 22 chr20 65294084 65294422 -1373583 + LTR29 LTR ERV1 127 517 -127 340 286 35 14 chr20 65294510 65294650 -1373355 + MIR SINE MIR 91 234 -28 1706 261 22 35 chr20 65294702 65295155 -1372850 + LTR2 LTR ERV1 3 449 0 716 208 26 0 chr20 65295198 65295352 -1372653 - LTR26B LTR ERV1 0 531 374 3564 119 68 70 chr20 65295440 65296215 -1371790 - LTR1 LTR ERV1 0 785 12 1035 171 0 17 chr20 65296222 65296403 -1371602 - AluJo SINE Alu -87 225 48 1217 203 95 62 chr20 65296404 65296774 -1371231 - LTR26B LTR ERV1 -147 384 3 4057 82 24 15 chr20 65296774 65297322 -1370683 - MER41A LTR ERV1 0 554 2 226 262 146 10 chr20 65298219 65298322 -1369683 - L1MD2 LINE L1 -17 6342 6226 246 354 6 6 chr20 65299053 65299305 -1368700 + G-rich Low_complexity Low_complexity 1 252 0 206 227 173 0 chr20 65299316 65299391 -1368614 - L3b LINE CR1 -170 1413 1326 298 136 0 85 chr20 65300296 65300414 -1367591 + (AGGGGG)n Simple_repeat Simple_repeat 4 111 0 240 267 50 0 chr20 65302008 65302068 -1365937 + MIR SINE MIR 27 89 -173 207 209 0 0 chr20 65306233 65306276 -1361729 + T-rich Low_complexity Low_complexity 1 43 0 248 248 105 29 chr20 65307293 65307398 -1360607 + L2 LINE L2 3140 3252 -20 186 43 0 0 chr20 65307405 65307428 -1360577 + (TGGA)n Simple_repeat Simple_repeat 1 23 0 274 298 65 40 chr20 65309873 65309997 -1358008 + MIR3 SINE MIR 14 140 -68 2441 57 0 3 chr20 65310928 65311227 -1356778 - AluY SINE Alu -13 298 1 287 327 10 0 chr20 65311814 65311918 -1356087 - MIR SINE MIR -89 173 69 292 275 66 11 chr20 65313626 65313717 -1354288 - L2 LINE L2 -6 3307 3212 343 256 44 0 chr20 65314290 65314380 -1353625 + MER58A DNA MER1_type 40 133 0 272 250 16 0 chr20 65314380 65314435 -1353570 + MER58A DNA MER1_type 162 217 -7 220 258 186 0 chr20 65314605 65314702 -1353303 + MIR SINE MIR 112 226 -36 245 213 40 93 chr20 65315365 65315440 -1352565 + MIR SINE MIR 89 160 -48 215 151 41 55 chr20 65315880 65315953 -1352052 + (CACCC)n Simple_repeat Simple_repeat 4 75 0 6596 51 30 0 chr20 65315953 65316155 -1351850 - LTR13 LTR ERVK -95 912 718 212 0 36 0 chr20 65316155 65316183 -1351822 + (GA)n Simple_repeat Simple_repeat 2 30 0 6596 51 30 0 chr20 65316183 65316864 -1351141 - LTR13 LTR ERVK -289 718 2 28 0 0 0 chr20 65318834 65318862 -1349143 + GC_rich Low_complexity Low_complexity 1 28 0 21 57 0 0 chr20 65319143 65319178 -1348827 + GC_rich Low_complexity Low_complexity 1 35 0 313 281 12 18 chr20 65319481 65319648 -1348357 + C-rich Low_complexity Low_complexity 2 167 0 622 206 0 7 chr20 65320750 65320897 -1347108 + L1MB7 LINE L1 6039 6178 0 281 325 0 0 chr20 65322158 65322324 -1345681 + (CAGGA)n Simple_repeat Simple_repeat 3 168 0 209 352 0 0 chr20 65322478 65322654 -1345351 + (CAGGA)n Simple_repeat Simple_repeat 3 178 0 200 369 0 0 chr20 65322578 65322754 -1345251 + GA-rich Low_complexity Low_complexity 1 176 0 * 286 335 0 0 chr20 65322758 65322934 -1345071 + (CAGGA)n Simple_repeat Simple_repeat 3 178 0 654 254 124 38 chr20 65323111 65323458 -1344547 - MLT1C LTR MaLR 0 467 91 494 204 0 0 chr20 65323460 65323548 -1344457 - AluJ/FLAM SINE Alu -224 88 1 211 150 25 0 chr20 65326674 65326714 -1341291 + CT-rich Low_complexity Low_complexity 1 41 0 500 249 132 89 chr20 65326778 65327127 -1340878 - MLT1A1 LTR MaLR -1 364 1 281 317 30 10 chr20 65327573 65327674 -1340331 - MIR SINE MIR -65 197 95 1506 159 165 71 chr20 65328174 65328408 -1339597 - LTR54 LTR ERV1 0 510 299 2021 119 7 0 chr20 65328408 65328694 -1339311 + AluSx SINE Alu 15 302 -10 2185 84 11 0 chr20 65328697 65328981 -1339024 + AluSc SINE Alu 5 291 -18 1506 159 165 71 chr20 65328981 65329208 -1338797 - LTR54 LTR ERV1 -212 298 1 228 164 36 36 chr20 65329750 65329805 -1338200 + L2 LINE L2 3214 3268 -4 1948 140 0 19 chr20 65330043 65330351 -1337654 - AluSx SINE Alu -10 302 1 322 279 31 58 chr20 65331018 65331218 -1336787 + MLT1K LTR MaLR 422 588 0 246 356 0 0 chr20 65332288 65332378 -1335627 + L1ME LINE L1 5621 5710 -411 259 188 87 0 chr20 65333424 65333493 -1334512 - LTR16A1 LTR ERVL 0 457 383 1521 198 34 9 chr20 65333493 65333842 -1334163 - MLT1A1 LTR MaLR 0 365 8 239 281 49 0 chr20 65334474 65334556 -1333449 + (CATATA)n Simple_repeat Simple_repeat 1 86 0 399 278 0 0 chr20 65334836 65334933 -1333072 + MIR SINE MIR 48 144 -118 189 369 15 0 chr20 65335052 65335117 -1332888 - MIR SINE MIR -62 146 81 1480 236 121 6 chr20 65336052 65336190 -1331815 + L1ME1 LINE L1 5421 5542 -622 2113 127 0 0 chr20 65336190 65336490 -1331515 - AluSx SINE Alu -12 300 1 1480 236 121 6 chr20 65336490 65336967 -1331038 + L1ME1 LINE L1 5542 6154 -10 200 222 14 104 chr20 65337409 65337553 -1330452 + C-rich Low_complexity Low_complexity 2 132 0 21 0 0 0 chr20 65339309 65339330 -1328675 + GC_rich Low_complexity Low_complexity 1 21 0 2177 107 0 23 chr20 65344193 65344503 -1323502 - AluSx SINE Alu -9 303 1 2078 108 0 10 chr20 65344859 65345154 -1322851 + AluSx SINE Alu 6 297 -15 840 167 16 88 chr20 65345264 65345456 -1322549 - FRAM SINE Alu 0 176 1 2040 125 0 0 chr20 65356558 65356845 -1311160 + AluSq SINE Alu 5 291 -22 336 329 0 0 chr20 65359107 65359256 -1308749 + G-rich Low_complexity Low_complexity 1 149 0 226 86 0 267 chr20 65362261 65362493 -1305512 + (CAGCC)n Simple_repeat Simple_repeat 4 173 0 1904 126 9 28 chr20 65363301 65363618 -1304387 - AluJb SINE Alu -1 311 1 932 289 112 18 chr20 65363998 65364500 -1303505 - L1ME3 LINE L1 -195 6036 5488 259 286 0 0 chr20 65364542 65364612 -1303393 - L1MD2 LINE L1 -240 6119 6050 237 281 89 7 chr20 65364692 65364838 -1303167 - L1ME3 LINE L1 -2161 4054 3897 347 299 0 52 chr20 65364857 65364954 -1303051 + L1MC4 LINE L1 6614 6705 -1337 802 209 0 64 chr20 65364957 65365129 -1302876 - AluJo SINE Alu -30 282 122 2713 264 93 19 chr20 65365132 65366063 -1301942 - L1ME3 LINE L1 -2384 3831 2766 2282 86 0 0 chr20 65366063 65366354 -1301651 + AluSx SINE Alu 1 291 -21 2713 264 93 19 chr20 65366354 65367027 -1300978 - L1ME3 LINE L1 -3449 2766 2144 1247 281 34 56 chr20 65367024 65367364 -1300641 - L1MC5 LINE L1 -35 7926 7607 * 2172 104 0 0 chr20 65367364 65367651 -1300354 - AluSx SINE Alu -25 287 1 1247 281 34 56 chr20 65367651 65367992 -1300013 - L1MC5 LINE L1 -354 7607 7260 729 189 0 0 chr20 65368253 65368375 -1299630 - FLAM_A SINE Alu -5 137 16 531 236 185 15 chr20 65368467 65368659 -1299346 + MIR SINE MIR 34 259 -3 240 35 0 0 chr20 65368822 65368851 -1299154 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 221 320 0 0 chr20 65369188 65369291 -1298714 + CT-rich Low_complexity Low_complexity 2 104 0 207 301 7 35 chr20 65369548 65369691 -1298314 + CT-rich Low_complexity Low_complexity 2 140 0 180 0 0 0 chr20 65369750 65369770 -1298235 + (TCCC)n Simple_repeat Simple_repeat 3 22 0 217 339 59 10 chr20 65375617 65375768 -1292237 + MIR SINE MIR 2 136 -72 905 195 128 8 chr20 65375894 65376151 -1291854 - L1MB8 LINE L1 -5 6173 5886 198 102 0 68 chr20 65378554 65378613 -1289392 + (GTGTG)n Simple_repeat Simple_repeat 4 58 0 288 180 90 10 chr20 65379247 65379347 -1288658 + (CCCCAG)n Simple_repeat Simple_repeat 1 108 0 218 323 146 0 chr20 65379517 65379647 -1288358 - L3 LINE CR1 -3 1574 1426 1257 214 62 7 chr20 65382228 65382518 -1285487 + AluSg SINE Alu 1 306 -4 26 30 0 0 chr20 65382550 65382583 -1285422 + AT_rich Low_complexity Low_complexity 1 33 0 180 342 54 36 chr20 65383732 65383843 -1284162 - MIR SINE MIR -39 223 111 204 267 191 0 chr20 65384852 65384967 -1283038 - MIR SINE MIR -65 143 30 466 370 83 21 chr20 65388709 65389784 -1278221 - L1M4 LINE L1 -1318 4828 3688 300 301 0 10 chr20 65393820 65393923 -1274082 + CT-rich Low_complexity Low_complexity 1 102 0 420 313 104 29 chr20 65399087 65399432 -1268573 + L1M4 LINE L1 2650 3020 -3126 1744 163 3 29 chr20 65399437 65399750 -1268255 - AluJb SINE Alu -7 305 1 340 284 43 7 chr20 65400916 65401057 -1266948 - MLT1J LTR MaLR -245 266 121 524 257 0 6 chr20 65401477 65401656 -1266349 + (TG)n Simple_repeat Simple_repeat 1 178 0 237 233 0 17 chr20 65401729 65401789 -1266216 + (CA)n Simple_repeat Simple_repeat 2 60 0 413 114 0 14 chr20 65402382 65402452 -1265553 + U6 snRNA snRNA 14 82 -25 321 347 113 47 chr20 65402453 65402773 -1265232 + L1ME2 LINE L1 1735 2075 -4465 957 280 106 33 chr20 65403298 65403881 -1264124 + L1ME2 LINE L1 5341 6024 -534 2173 106 0 7 chr20 65403881 65404183 -1263822 + AluSc SINE Alu 1 300 -9 957 280 106 33 chr20 65404183 65404507 -1263498 + L1ME2 LINE L1 6024 6323 -235 348 307 57 69 chr20 65404658 65404990 -1263015 + L1MB7 LINE L1 5644 5971 -213 304 364 11 62 chr20 65405192 65405368 -1262637 + L1ME3A LINE L1 5763 5929 -241 567 251 92 77 chr20 65405714 65405825 -1262180 + L1ME2 LINE L1 5745 5853 -311 5324 77 49 3 chr20 65405825 65406555 -1261450 + MER4E LTR ERV1 3 766 0 567 251 92 77 chr20 65406555 65406762 -1261243 + L1ME2 LINE L1 5853 6073 -91 * 719 344 65 20 chr20 65406759 65407343 -1260662 + L1MDa LINE L1 2614 3223 -3317 334 253 68 27 chr20 65407348 65407494 -1260511 + L1ME2 LINE L1 5329 5480 -684 320 303 8 16 chr20 65408155 65408277 -1259728 - MER112 DNA MER1_type -40 220 100 612 284 180 5 chr20 65408589 65409011 -1258994 - MER74A LTR ERVL -46 512 17 473 268 87 59 chr20 65409045 65409366 -1258639 + L1ME2 LINE L1 5704 6033 -131 21 0 0 0 chr20 65414048 65414069 -1253936 + GC_rich Low_complexity Low_complexity 1 21 0 278 254 0 6 chr20 65416086 65416267 -1251738 + C-rich Low_complexity Low_complexity 1 180 0 298 117 44 61 chr20 65421161 65421341 -1246664 + (CAGGG)n Simple_repeat Simple_repeat 2 178 0 367 50 0 33 chr20 65424898 65424958 -1243047 + (TG)n Simple_repeat Simple_repeat 1 58 0 268 281 16 31 chr20 65426980 65427108 -1240897 + C-rich Low_complexity Low_complexity 6 131 0 450 366 73 0 chr20 65427325 65427516 -1240489 - MIR SINE MIR -36 226 22 262 317 57 24 chr20 65428525 65428648 -1239357 - MER5A DNA MER1_type -37 152 26 337 266 30 18 chr20 65430812 65430981 -1237024 + (CCCTG)n Simple_repeat Simple_repeat 5 175 0 352 275 67 18 chr20 65431993 65432155 -1235850 + MIR SINE MIR 21 184 -71 295 339 26 0 chr20 65433168 65433283 -1234722 + MIR SINE MIR 30 147 -61 204 157 0 59 chr20 65433852 65433954 -1234051 + (TG)n Simple_repeat Simple_repeat 1 96 0 220 336 88 16 chr20 65438658 65438783 -1229222 + MIR SINE MIR 90 223 -39 238 230 16 75 chr20 65440624 65440811 -1227194 + C-rich Low_complexity Low_complexity 2 177 0 808 182 96 20 chr20 65443998 65444196 -1223809 + MER52A LTR ERV1 1 213 -1542 * 4686 181 85 54 chr20 65444183 65445516 -1222489 + MER52A LTR ERV1 382 1755 0 2063 129 3 3 chr20 65447577 65447880 -1220125 - AluSx SINE Alu -9 303 1 194 200 0 114 chr20 65448301 65448371 -1219634 + L2 LINE L2 417 478 -2836 207 69 0 0 chr20 65448805 65448834 -1219171 + (CCCCAA)n Simple_repeat Simple_repeat 1 29 0 1101 286 122 46 chr20 65449358 65449785 -1218220 + L1MEc LINE L1 460 853 -5543 2082 120 3 3 chr20 65449785 65450084 -1217921 + AluSq SINE Alu 1 299 -14 1101 286 122 46 chr20 65450084 65450753 -1217252 + L1MEc LINE L1 853 1640 -4756 1222 248 46 2 chr20 65451593 65452085 -1215920 + L1MCc LINE L1 1146 1666 -4887 527 292 5 0 chr20 65452125 65452557 -1215448 + (CA)n Simple_repeat Simple_repeat 1 434 0 559 234 0 10 chr20 65452605 65452924 -1215081 + (CA)n Simple_repeat Simple_repeat 1 315 0 750 263 191 67 chr20 65452947 65453137 -1214868 + L1MCc LINE L1 1779 1944 -5129 2169 104 7 0 chr20 65453137 65453434 -1214571 + AluSx SINE Alu 3 301 -11 750 263 191 67 chr20 65453434 65453966 -1214039 + L1MCc LINE L1 1944 2684 -4389 1379 271 17 22 chr20 65453978 65454552 -1213453 + L1MCc LINE L1 2869 3392 -3549 1438 123 32 0 chr20 65454552 65454772 -1213233 + AluSg/x SINE Alu 86 312 0 2265 233 85 17 chr20 65454774 65455427 -1212578 + L1MCc LINE L1 3380 4116 -2825 1981 128 7 0 chr20 65455427 65455717 -1212288 + AluSx SINE Alu 1 292 -20 2265 233 85 17 chr20 65455717 65455991 -1212014 + L1MCc LINE L1 4116 4370 -2571 704 298 176 18 chr20 65456074 65456580 -1211425 - MLT1G1 LTR MaLR -9 586 1 725 134 7 34 chr20 65457190 65457339 -1210666 - MER83 LTR ERV1 -9 439 295 1946 144 6 0 chr20 65457433 65457759 -1210246 - MER83 LTR ERV1 -120 328 1 1678 221 68 94 chr20 65461526 65462251 -1205754 - L1MB3 LINE L1 0 6183 5478 257 75 25 0 chr20 65463054 65463094 -1204911 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 472 223 16 43 chr20 65468082 65468266 -1199739 + (TG)n Simple_repeat Simple_repeat 1 179 0 374 346 17 11 chr20 65468277 65468456 -1199549 + (TG)n Simple_repeat Simple_repeat 1 180 0 193 260 26 39 chr20 65468792 65468869 -1199136 + L2 LINE L2 3137 3212 -60 22 0 0 0 chr20 65471819 65471841 -1196164 + GC_rich Low_complexity Low_complexity 1 22 0 372 329 7 7 chr20 65473875 65474015 -1193990 + (TG)n Simple_repeat Simple_repeat 2 141 0 203 398 23 0 chr20 65475887 65475975 -1192030 - MIR SINE MIR -92 170 81 233 309 10 21 chr20 65477723 65477820 -1190185 + (CA)n Simple_repeat Simple_repeat 2 97 0 183 80 0 0 chr20 65477855 65477880 -1190125 + (CA)n Simple_repeat Simple_repeat 2 26 0 777 217 39 10 chr20 65479256 65479459 -1188546 + L1MB5 LINE L1 5966 6174 0 267 160 0 183 chr20 65479990 65480209 -1187796 + GA-rich Low_complexity Low_complexity 1 179 0 227 222 0 0 chr20 65486009 65486054 -1181951 + Charlie5 DNA MER1_type 162 206 -2406 203 158 0 26 chr20 65487420 65487458 -1180547 + GA-rich Low_complexity Low_complexity 2 38 0 457 205 39 133 chr20 65489724 65489958 -1178047 - MLT1C LTR MaLR -203 264 53 1901 245 51 115 chr20 65489991 65490120 -1177885 - MLT1C-int LTR MaLR -5 1730 1594 2300 93 0 0 chr20 65490120 65490420 -1177585 + AluSx SINE Alu 1 300 -12 1901 245 51 115 chr20 65490420 65491552 -1176453 - MLT1C-int LTR MaLR -141 1594 91 295 256 128 35 chr20 65491550 65491622 -1176383 - MLT1-int LTR MaLR -35 1336 1272 * 2155 119 0 3 chr20 65491622 65491934 -1176071 + AluSx SINE Alu 1 311 -1 295 256 128 35 chr20 65491934 65492033 -1175972 - MLT1-int LTR MaLR -99 1272 1149 693 258 106 19 chr20 65492115 65492437 -1175568 - MLT1C LTR MaLR 0 467 118 216 250 18 0 chr20 65493835 65493891 -1174114 + (CACCC)n Simple_repeat Simple_repeat 3 59 0 1624 284 68 22 chr20 65499134 65499765 -1168240 - L1MB5 LINE L1 -15 6159 5500 1585 174 49 0 chr20 65499801 65500089 -1167916 + AluJb SINE Alu 1 302 -10 600 132 9 0 chr20 65500104 65500210 -1167795 + Tigger1 DNA MER2_type 1739 1845 -573 2779 167 20 48 chr20 65500676 65500931 -1167074 + Tigger1 DNA MER2_type 1832 2093 -325 2459 54 0 0 chr20 65500931 65501228 -1166777 + AluY SINE Alu 1 297 -14 2779 167 20 48 chr20 65501228 65501457 -1166548 + Tigger1 DNA MER2_type 2093 2298 -120 2315 86 0 7 chr20 65501457 65501760 -1166245 - AluSx SINE Alu -11 301 1 2779 167 20 48 chr20 65501760 65501878 -1166127 + Tigger1 DNA MER2_type 2298 2418 0 378 254 43 25 chr20 65502196 65502350 -1165655 - MLT1D LTR MaLR -197 270 110 2375 68 0 0 chr20 65502493 65502789 -1165216 - AluSg SINE Alu -14 296 1 207 0 0 0 chr20 65503842 65503865 -1164140 + (CCCTG)n Simple_repeat Simple_repeat 1 23 0 1369 37 0 0 chr20 65505643 65505827 -1162178 - AluY SINE Alu 0 305 122 2093 101 0 53 chr20 65507955 65508273 -1159732 - AluSx SINE Alu -11 301 1 1169 231 74 0 chr20 65508546 65508858 -1159147 + MER65A LTR ERV1 110 444 -1 330 269 35 58 chr20 65508860 65508992 -1159013 - L1MC4a LINE L1 -1087 6721 6592 1615 118 48 83 chr20 65508992 65509306 -1158699 + AluSg1 SINE Alu 1 303 -6 330 269 35 58 chr20 65509306 65509344 -1158661 - L1MC4a LINE L1 -1216 6592 6555 318 345 79 0 chr20 65509882 65510021 -1157984 + HAL1 LINE L1 1114 1263 -1244 1993 96 0 38 chr20 65510021 65510316 -1157689 + AluSx SINE Alu 1 311 0 244 0 0 0 chr20 65510316 65510343 -1157662 + (TAAA)n Simple_repeat Simple_repeat 2 156 0 353 355 103 34 chr20 65510438 65510623 -1157382 - MIR SINE MIR 0 262 56 2512 51 0 13 chr20 65510623 65510938 -1157067 + AluY SINE Alu 1 311 0 353 355 103 34 chr20 65510938 65510986 -1157019 - MIR SINE MIR -206 56 13 2278 81 0 0 chr20 65511675 65511970 -1156035 + AluSg SINE Alu 1 295 -15 910 238 80 37 chr20 65512401 65512725 -1155280 - MLT1B LTR MaLR -49 341 4 2121 98 0 53 chr20 65513670 65513988 -1154017 - AluSx SINE Alu -11 301 1 328 138 31 0 chr20 65514098 65514163 -1153842 - AluS SINE Alu -232 67 1 209 114 29 0 chr20 65514231 65514266 -1153739 + A-rich Low_complexity Low_complexity 2 37 0 2493 74 0 0 chr20 65514271 65514580 -1153425 + AluSc SINE Alu 1 309 0 1243 229 39 110 chr20 65514589 65514736 -1153269 + L1M4 LINE L1 4758 4914 -1232 1708 163 32 0 chr20 65514736 65515019 -1152986 + AluJb SINE Alu 2 293 -19 1243 229 39 110 chr20 65515019 65515490 -1152515 + L1M4 LINE L1 4914 5332 -814 2198 116 0 0 chr20 65515490 65515800 -1152205 + AluSg SINE Alu 1 310 0 330 333 69 14 chr20 65516577 65516592 -1151413 - HAL1 LINE L1 -2339 168 155 1695 197 3 10 chr20 65516592 65516902 -1151103 - AluJo SINE Alu -4 308 1 330 333 69 14 chr20 65516902 65517030 -1150975 - HAL1 LINE L1 -2352 155 17 754 158 86 40 chr20 65517153 65517305 -1150700 + AluJb SINE Alu 153 311 -1 516 328 10 5 chr20 65517314 65517506 -1150499 - LTR16A LTR ERVL -90 360 168 1169 259 27 16 chr20 65517620 65517987 -1150018 + MER20B DNA MER1_type 408 778 -5 643 313 100 23 chr20 65518483 65518849 -1149156 + L2 LINE L2 2586 3010 -303 3633 122 17 15 chr20 65518849 65519375 -1148630 - MER1A DNA MER1_type 0 527 1 643 313 100 23 chr20 65519375 65519547 -1148458 + L2 LINE L2 3010 3167 -146 1128 170 0 0 chr20 65519551 65519733 -1148272 - AluSg/x SINE Alu -9 303 122 2001 122 7 0 chr20 65520068 65520362 -1147643 + AluSx SINE Alu 3 298 -14 1019 252 133 36 chr20 65520527 65520940 -1147065 - L2 LINE L2 -179 3134 2654 1933 145 3 3 chr20 65520940 65521229 -1146776 + AluJb SINE Alu 4 292 -20 1019 252 133 36 chr20 65521229 65521304 -1146701 - L2 LINE L2 -659 2654 2588 270 0 0 0 chr20 65521589 65521619 -1146386 + (A)n Simple_repeat Simple_repeat 1 30 0 332 265 189 10 chr20 65522899 65523095 -1144910 - L2 LINE L2 0 3313 3083 1974 123 0 46 chr20 65523628 65523744 -1144261 - AluSq SINE Alu -2 311 191 2404 60 3 0 chr20 65523744 65524044 -1143961 - AluY SINE Alu -10 301 1 1974 123 0 46 chr20 65524044 65524253 -1143752 - AluSq SINE Alu -122 191 1 1124 261 164 3 chr20 65524518 65524908 -1143097 + LTR16B LTR ERVL 1 453 -11 839 261 20 0 chr20 65524922 65525121 -1142884 - MER63A DNA MER1_type -7 203 1 300 227 23 80 chr20 65525121 65525209 -1142796 + L1ME LINE L1 5642 5724 -438 1311 104 24 9 chr20 65525314 65525526 -1142479 - AluY SINE Alu -58 253 39 8094 101 14 19 chr20 65525526 65527412 -1140593 - L1PA8A LINE L1 -302 5829 3958 1188 120 0 0 chr20 65527581 65527699 -1140306 + (CCA)n Simple_repeat Simple_repeat 1 478 0 1188 120 0 0 chr20 65527699 65528059 -1139946 + (CCA)n Simple_repeat Simple_repeat 1 360 0 1016 137 0 11 chr20 65528070 65528252 -1139753 + (CCA)n Simple_repeat Simple_repeat 1 180 0 1125 132 0 4 chr20 65528329 65528657 -1139348 + (CCA)n Simple_repeat Simple_repeat 1 506 0 1832 138 3 7 chr20 65532621 65532933 -1135072 - AluSx SINE Alu 0 311 1 698 276 98 40 chr20 65533989 65534337 -1133668 + MLT1K LTR MaLR 206 573 -15 263 231 51 51 chr20 65535110 65535227 -1132778 + C-rich Low_complexity Low_complexity 4 120 0 493 194 14 156 chr20 65535901 65536028 -1131977 + LTR62 LTR ERVK 1 88 -631 1936 134 23 13 chr20 65536028 65536335 -1131670 + AluSx SINE Alu 1 310 -2 493 194 14 156 chr20 65536335 65536418 -1131587 + LTR62 LTR ERVK 88 181 -538 856 222 153 11 chr20 65536465 65536740 -1131265 + LTR62 LTR ERVK 376 689 -30 918 241 40 0 chr20 65537490 65537743 -1130262 - MLT2C2 LTR ERVL -184 280 18 213 286 73 68 chr20 65538803 65539051 -1128954 - L2 LINE L2 -176 3096 2848 194 216 3 0 chr20 65539826 65539875 -1128130 - MIR SINE MIR -63 145 101 309 286 84 11 chr20 65543545 65543723 -1124282 + L2 LINE L2 2874 3064 -249 377 295 91 53 chr20 65544306 65544404 -1123601 + L1MB5 LINE L1 5844 5937 -237 1593 169 26 0 chr20 65544404 65544706 -1123299 + AluJo SINE Alu 1 310 -2 377 295 91 53 chr20 65544706 65544926 -1123079 + L1MB5 LINE L1 5937 6174 0 222 315 31 39 chr20 65545676 65545806 -1122199 - L3 LINE CR1 -42 1535 1407 288 0 0 0 chr20 65548225 65548257 -1119748 + (TG)n Simple_repeat Simple_repeat 1 32 0 802 164 7 14 chr20 65548312 65548452 -1119553 + FRAM SINE Alu 28 166 -10 197 299 78 0 chr20 65554029 65554106 -1113899 + MIR SINE MIR 51 133 -129 24 0 0 0 chr20 65557438 65557462 -1110543 + GC_rich Low_complexity Low_complexity 1 24 0 34 55 0 0 chr20 65557673 65557728 -1110277 + GC_rich Low_complexity Low_complexity 1 55 0 34 55 0 0 chr20 65557817 65557872 -1110133 + GC_rich Low_complexity Low_complexity 1 55 0 821 111 17 28 chr20 65557916 65558097 -1109908 + (GGGGA)n Simple_repeat Simple_repeat 2 180 0 304 147 37 37 chr20 65558100 65558209 -1109796 + G-rich Low_complexity Low_complexity 1 109 0 1668 174 17 0 chr20 65561116 65561415 -1106590 + AluJo SINE Alu 1 304 -8 1222 140 0 0 chr20 65561415 65561593 -1106412 + AluJo/FRAM SINE Alu 134 311 -1 21 0 0 0 chr20 65561602 65561623 -1106382 + AT_rich Low_complexity Low_complexity 1 21 0 2270 104 0 0 chr20 65561633 65561931 -1106074 + AluSq SINE Alu 1 298 -15 2080 125 6 0 chr20 65561933 65562244 -1105761 + AluSp SINE Alu 1 313 0 1198 220 34 18 chr20 65564570 65564897 -1103108 + MLT1A1 LTR MaLR 21 352 -13 655 238 37 37 chr20 65565537 65565751 -1102254 + MER20 DNA MER1_type 1 214 -5 2193 89 10 3 chr20 65565762 65566055 -1101950 + AluSg SINE Alu 1 295 -15 2132 126 3 0 chr20 65566096 65566406 -1101599 + AluSq SINE Alu 1 311 -2 235 333 83 0 chr20 65566671 65566791 -1101214 + MIR SINE MIR 28 157 -105 2196 52 28 0 chr20 65568744 65569034 -1098971 + AluY SINE Alu 1 298 -13 430 225 139 20 chr20 65569711 65569862 -1098143 + Charlie1 DNA MER1_type 4 172 -2589 478 255 101 0 chr20 65571007 65571156 -1096849 - MER53 DNA DNA 0 189 26 698 278 153 11 chr20 65571439 65571792 -1096213 + MLT1D LTR MaLR 23 425 -80 211 119 17 51 chr20 65573353 65573412 -1094593 + G-rich Low_complexity Low_complexity 5 61 0 21 71 0 0 chr20 65573424 65573466 -1094539 + GC_rich Low_complexity Low_complexity 1 42 0 265 173 19 77 chr20 65574655 65574670 -1093335 + MER69 DNA AcHobo 2221 2235 -291 2317 90 0 0 chr20 65574670 65574970 -1093035 + AluSx SINE Alu 1 300 -12 265 173 19 77 chr20 65574970 65575058 -1092947 + MER69 DNA AcHobo 2235 2318 -208 2434 63 3 3 chr20 65575232 65575534 -1092471 - AluSc SINE Alu -7 302 1 777 185 0 0 chr20 65576789 65576962 -1091043 + (TGGA)n Simple_repeat Simple_repeat 2 174 0 1159 137 13 2 chr20 65577008 65577724 -1090281 + (TGGA)n Simple_repeat Simple_repeat 1 724 0 899 143 2 19 chr20 65577748 65578165 -1089840 + (TGGA)n Simple_repeat Simple_repeat 1 409 0 349 290 44 2 chr20 65580434 65580577 -1087428 + MIR SINE MIR 8 136 -72 48 81 0 0 chr20 65584030 65584141 -1083864 + GC_rich Low_complexity Low_complexity 1 111 0 22 35 0 0 chr20 65584187 65584216 -1083789 + GC_rich Low_complexity Low_complexity 1 29 0 339 193 16 86 chr20 65584355 65584542 -1083463 + G-rich Low_complexity Low_complexity 6 179 0 812 208 235 4 chr20 65586371 65586635 -1081370 + MSTD LTR MaLR 21 345 -51 252 79 0 0 chr20 65586690 65586728 -1081277 + MSTD LTR MaLR 406 443 -14 250 213 16 0 chr20 65586947 65587008 -1080997 - MIR SINE MIR -131 131 70 687 253 7 19 chr20 65589157 65589413 -1078592 - L1ME3A LINE L1 -200 5970 5660 1995 157 0 0 chr20 65589566 65589871 -1078134 - AluJb SINE Alu -7 305 1 243 243 0 14 chr20 65589872 65589942 -1078063 - LTR41 LTR ERVL -701 72 4 265 298 12 0 chr20 65589943 65590027 -1077978 - L1MCc LINE L1 -5045 1378 1294 984 264 99 15 chr20 65590466 65590940 -1077065 + MLT1E3 LTR MaLR 43 617 -7 526 270 195 0 chr20 65591403 65591644 -1076361 - L1MC4 LINE L1 -460 7582 7295 1956 119 3 14 chr20 65591644 65591937 -1076068 + AluSx SINE Alu 1 290 -22 2268 133 23 76 chr20 65591964 65592132 -1075873 - MER41E LTR ERV1 0 512 337 531 165 174 17 chr20 65592132 65592247 -1075758 + FLAM_A SINE Alu 1 133 0 2268 133 23 76 chr20 65592247 65592565 -1075440 - MER41E LTR ERV1 -175 337 52 242 265 77 29 chr20 65592569 65592739 -1075266 + (CAGTC)n Simple_repeat Simple_repeat 3 180 0 * 282 297 58 0 chr20 65592704 65592892 -1075113 + (CTCGG)n Simple_repeat Simple_repeat 1 198 0 295 210 25 0 chr20 65592892 65592973 -1075032 - MER41E LTR ERV1 -429 83 1 277 258 72 0 chr20 65593053 65593150 -1074855 - L1MC4 LINE L1 -762 7280 7177 1017 302 86 35 chr20 65593413 65593952 -1074053 - L1ME1 LINE L1 -278 5888 5319 2238 78 3 23 chr20 65593952 65594261 -1073744 - AluSx SINE Alu -5 307 5 3425 201 55 64 chr20 65594275 65594719 -1073286 - L1MB7 LINE L1 0 6184 5737 2350 79 0 0 chr20 65594719 65595009 -1072996 - AluSx SINE Alu -22 290 1 3425 201 55 64 chr20 65595009 65595384 -1072621 - L1MB7 LINE L1 -447 5737 5360 2252 94 0 3 chr20 65595384 65595683 -1072322 - AluSg SINE Alu -12 298 1 3425 201 55 64 chr20 65595683 65596153 -1071852 - L1MB7 LINE L1 -824 5360 4905 1740 156 32 0 chr20 65596153 65596436 -1071569 - AluJb SINE Alu -19 293 2 3425 201 55 64 chr20 65596436 65596575 -1071430 - L1MB7 LINE L1 -1279 4905 4766 2478 75 0 0 chr20 65596575 65596883 -1071122 - AluSc SINE Alu -1 308 1 209 114 29 0 chr20 65596888 65596923 -1071082 + T-rich Low_complexity Low_complexity 2 37 0 1961 104 25 0 chr20 65596994 65597309 -1070696 + AluSx SINE Alu 1 322 0 336 233 12 0 chr20 65597317 65597403 -1070602 + L1MB5 LINE L1 4884 4970 -1176 3273 187 72 15 chr20 65597760 65597797 -1070208 + L1MB5 LINE L1 5022 5055 -1119 1685 185 0 7 chr20 65597797 65598099 -1069906 + AluJb SINE Alu 1 300 -12 3273 187 72 15 chr20 65598099 65599053 -1068952 + L1MB5 LINE L1 5055 6165 -9 2256 93 0 0 chr20 65599089 65599379 -1068626 - AluSx SINE Alu -22 290 1 459 298 45 25 chr20 65599388 65599659 -1068346 - L1MB7 LINE L1 -1446 4700 4436 2097 113 143 49 chr20 65599659 65599944 -1068061 - MSTA LTR MaLR 0 428 95 2309 78 0 31 chr20 65599944 65600264 -1067741 + AluSg SINE Alu 1 310 0 2097 113 143 49 chr20 65600264 65600369 -1067636 - MSTA LTR MaLR -333 95 1 459 298 45 25 chr20 65600369 65600584 -1067421 - L1MB7 LINE L1 -1710 4436 4227 1872 134 9 37 chr20 65600584 65600905 -1067100 - AluSx SINE Alu 0 312 1 459 298 45 25 chr20 65600905 65601098 -1066907 - L1MB7 LINE L1 -1919 4227 3918 1189 114 5 27 chr20 65601203 65601387 -1066618 - AluSp SINE Alu 0 313 134 2145 118 16 0 chr20 65601387 65601691 -1066314 - AluSx SINE Alu -2 310 2 2466 58 0 10 chr20 65601753 65602065 -1065940 - AluY SINE Alu -2 309 1 230 215 15 0 chr20 65602065 65602130 -1065875 - L1MDb LINE L1 -5401 1246 1181 847 168 21 0 chr20 65602140 65602283 -1065722 - FRAM SINE Alu -16 160 15 321 280 35 7 chr20 65602285 65602428 -1065577 - L1MDb LINE L1 -6382 160 14 202 291 87 39 chr20 65602465 65602568 -1065437 - L2 LINE L2 -5 3267 3160 279 358 109 0 chr20 65602625 65602762 -1065243 - MIR SINE MIR -2 260 109 22 56 0 0 chr20 65606103 65606139 -1061866 + GC_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr20 65606303 65606325 -1061680 + GC_rich Low_complexity Low_complexity 1 22 0 273 246 0 0 chr20 65607101 65607166 -1060839 + C-rich Low_complexity Low_complexity 1 65 0 2464 129 109 30 chr20 65608926 65609253 -1058752 - LTR10A LTR ERV1 -64 545 163 2425 59 0 7 chr20 65609253 65609557 -1058448 + AluY SINE Alu 1 302 -9 2464 129 109 30 chr20 65609557 65609734 -1058271 - LTR10A LTR ERV1 -446 163 1 1733 167 0 45 chr20 65609760 65610072 -1057933 + AluSx SINE Alu 3 300 -12 3117 172 97 63 chr20 65610340 65610779 -1057226 + MER31-int LTR ERV1 3611 4034 -902 2412 63 3 0 chr20 65610779 65611078 -1056927 + AluY SINE Alu 1 300 -11 3117 172 97 63 chr20 65611078 65611123 -1056882 + MER31-int LTR ERV1 4034 4076 -860 1533 188 3 7 chr20 65611123 65611405 -1056600 + AluJo SINE Alu 22 302 -10 3117 172 97 63 chr20 65611405 65611576 -1056429 + MER31-int LTR ERV1 4076 4240 -696 2308 98 0 0 chr20 65611576 65611881 -1056124 + AluSx SINE Alu 1 305 -7 2419 85 0 0 chr20 65611887 65612193 -1055812 + AluSp SINE Alu 1 306 -7 3117 172 97 63 chr20 65612193 65612508 -1055497 + MER31-int LTR ERV1 4244 4565 -371 1719 141 54 24 chr20 65612512 65612810 -1055195 + AluJo SINE Alu 1 307 -5 2157 238 32 59 chr20 65612811 65613560 -1054445 - LTR49-int LTR ERV1 -1394 3542 2814 2420 63 0 22 chr20 65613564 65613882 -1054123 - AluY SINE Alu 0 311 1 422 184 82 61 chr20 65613883 65614030 -1053975 - LTR49-int LTR ERV1 -4795 1536 1387 253 233 0 17 chr20 65614068 65614128 -1053877 - LTR49-int LTR ERV1 -5697 634 576 2604 30 0 0 chr20 65616309 65616607 -1051398 + AluY SINE Alu 1 298 -13 243 0 0 0 chr20 65616607 65616634 -1051371 + (TA)n Simple_repeat Simple_repeat 2 28 0 1260 108 0 0 chr20 65616634 65616801 -1051204 + AluSg/x SINE Alu 131 297 -13 768 145 3 16 chr20 65617293 65617614 -1050391 + (TG)n Simple_repeat Simple_repeat 1 316 0 2301 107 0 0 chr20 65618225 65618535 -1049470 - AluSg SINE Alu 0 310 1 381 329 7 7 chr20 65620550 65620702 -1047303 + (CACG)n Simple_repeat Simple_repeat 4 155 0 478 322 0 0 chr20 65620927 65621107 -1046898 + C-rich Low_complexity Low_complexity 1 180 0 331 239 0 38 chr20 65621143 65621372 -1046633 + C-rich Low_complexity Low_complexity 1 220 0 252 139 0 0 chr20 65628870 65628913 -1039092 + L2 LINE L2 3271 3313 0 879 183 13 3 chr20 65628915 65629228 -1038777 + (TGAA)n Simple_repeat Simple_repeat 1 316 0 192 125 0 0 chr20 65632141 65632173 -1035832 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 465 322 0 0 chr20 65634314 65634491 -1033514 + C-rich Low_complexity Low_complexity 1 177 0 1431 119 175 0 chr20 65634526 65634778 -1033227 - AluJo SINE Alu -6 306 11 778 124 7 58 chr20 65635495 65635632 -1032373 + AluJo/FLAM SINE Alu 1 130 -172 2037 118 3 10 chr20 65635632 65635929 -1032076 + AluSx SINE Alu 1 295 -17 380 179 42 53 chr20 65635932 65636027 -1031978 + MIR SINE MIR 47 140 -122 1103 219 105 6 chr20 65636404 65636746 -1031259 + L1MD1 LINE L1 5861 6236 -6 1974 100 3 50 chr20 65636746 65636920 -1031085 - AluSq SINE Alu 0 306 151 1672 52 57 0 chr20 65636920 65637131 -1030874 - AluY SINE Alu -14 297 75 1974 100 3 50 chr20 65637131 65637276 -1030729 - AluSq SINE Alu -155 151 1 1717 166 0 13 chr20 65637277 65637578 -1030427 - AluJb SINE Alu -15 297 1 444 242 16 31 chr20 65637914 65638042 -1029963 + FLAM_C SINE Alu 1 126 -7 23 0 0 0 chr20 65639256 65639279 -1028726 + GC_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr20 65639394 65639415 -1028590 + GC_rich Low_complexity Low_complexity 1 21 0 198 197 106 0 chr20 65642406 65642472 -1025533 + L2 LINE L2 3005 3077 -195 267 31 0 0 chr20 65643538 65643570 -1024435 + (GGGTG)n Simple_repeat Simple_repeat 4 35 0 2221 90 7 0 chr20 65643705 65644005 -1024000 - AluSx SINE Alu -9 303 2 263 379 0 11 chr20 65644593 65644767 -1023238 + (GGGTG)n Simple_repeat Simple_repeat 4 175 0 299 201 27 60 chr20 65644836 65645020 -1022985 + (TCGGG)n Simple_repeat Simple_repeat 1 178 0 251 242 65 0 chr20 65651869 65651931 -1016074 - MIR SINE MIR -80 182 117 275 318 47 9 chr20 65654909 65655016 -1012989 + MIR SINE MIR 37 147 -115 2130 102 3 35 chr20 65655116 65655429 -1012576 - AluSq SINE Alu -10 303 1 472 263 20 56 chr20 65655436 65655617 -1012388 - MIR SINE MIR -61 147 25 21 0 0 0 chr20 65657644 65657665 -1010340 + GC_rich Low_complexity Low_complexity 1 21 0 285 204 14 88 chr20 65659210 65659357 -1008648 + C-rich Low_complexity Low_complexity 2 137 0 222 37 0 0 chr20 65659451 65659478 -1008527 + (CCCCG)n Simple_repeat Simple_repeat 1 27 0 1146 137 0 0 chr20 65660095 65660270 -1007735 + AluSg/x SINE Alu 131 305 -5 314 167 0 0 chr20 65660276 65660330 -1007675 + MLT1G1 LTR MaLR 535 588 -7 1330 174 6 104 chr20 65660728 65661055 -1006950 - AluJb SINE Alu -17 295 1 2148 89 0 74 chr20 65661226 65661562 -1006443 + AluSx SINE Alu 1 311 -1 454 299 74 42 chr20 65661973 65662117 -1005888 + L1 LINE L1 5109 5247 -922 2319 56 24 3 chr20 65662117 65662404 -1005601 - AluY SINE Alu -18 293 1 454 299 74 42 chr20 65662404 65662569 -1005436 + L1 LINE L1 5247 5425 -744 808 181 0 0 chr20 65662859 65662997 -1005008 + FRAM SINE Alu 1 138 -38 269 237 35 53 chr20 65663661 65663775 -1004230 + L1MC4 LINE L1 7931 8042 0 2256 175 136 25 chr20 65664411 65664999 -1003006 + MER21B LTR ERV1 1 653 -210 371 286 149 7 chr20 65666019 65666173 -1001832 + MER21B LTR ERV1 677 852 -11 931 284 48 72 chr20 65666839 65667031 -1000974 + L1ME3A LINE L1 4886 5081 -1093 2380 70 6 19 chr20 65667031 65667346 -1000659 - AluY SINE Alu 0 311 1 931 284 48 72 chr20 65667346 65667525 -1000480 + L1ME3A LINE L1 5081 5263 -911 1857 158 10 0 chr20 65667525 65667829 -1000176 - AluJo SINE Alu 0 312 6 931 284 48 72 chr20 65667829 65668610 -999395 + L1ME3A LINE L1 5263 6011 -163 2175 90 20 17 chr20 65668668 65668967 -999038 + AluSx SINE Alu 1 300 -12 1928 124 7 10 chr20 65668969 65669267 -998738 + AluSx SINE Alu 1 297 -15 717 200 54 25 chr20 65669268 65669490 -998515 + L1MC/D LINE L1 5239 5466 -743 877 97 0 91 chr20 65669496 65669619 -998386 + AluJo SINE Alu 1 109 -203 2254 71 10 3 chr20 65669619 65669913 -998092 - AluY SINE Alu -15 296 1 877 97 0 91 chr20 65669913 65669943 -998062 + AluJo SINE Alu 109 140 -172 2043 136 3 0 chr20 65669943 65670251 -997754 + AluSx SINE Alu 1 309 -3 392 161 49 0 chr20 65670251 65670332 -997673 + L1MC/D LINE L1 5465 5549 -784 237 200 46 0 chr20 65670456 65670521 -997484 + L1MC/D LINE L1 5495 5562 -2223 259 154 19 0 chr20 65670534 65670586 -997419 + L1MC/D LINE L1 5497 5549 -784 * 1587 176 19 6 chr20 65670572 65670885 -997120 + L1MC/D LINE L1 5497 5813 -520 2311 85 3 0 chr20 65671695 65671988 -996017 - AluSq SINE Alu -17 296 3 562 221 15 7 chr20 65672369 65672505 -995500 + MLT1A1 LTR MaLR 228 364 -1 315 235 167 8 chr20 65672525 65672657 -995348 - Charlie1 DNA MER1_type -2603 158 6 303 211 5 106 chr20 65676334 65676533 -991472 + (CA)n Simple_repeat Simple_repeat 2 180 0 1961 123 10 3 chr20 65676642 65676934 -991071 - AluSx SINE Alu -18 294 1 1998 106 7 0 chr20 65678909 65679192 -988813 + AluSx SINE Alu 1 285 -27 2012 107 50 0 chr20 65679924 65680204 -987801 - AluSx SINE Alu -18 294 1 2056 133 3 0 chr20 65681905 65682214 -985791 + AluSx SINE Alu 1 310 -2 1728 184 7 10 chr20 65682322 65682632 -985373 - AluJb SINE Alu -3 309 1 270 0 0 0 chr20 65683513 65683543 -984462 + (CA)n Simple_repeat Simple_repeat 2 31 0 238 309 0 0 chr20 65684885 65684953 -983052 - L1MC3 LINE L1 -12 7773 7706 1414 248 75 44 chr20 65685026 65685218 -982787 - L1MC4 LINE L1 -159 7883 7699 2156 98 0 10 chr20 65685218 65685514 -982491 - AluSx SINE Alu -19 293 1 1414 248 75 44 chr20 65685514 65685605 -982400 - L1MC4 LINE L1 -343 7699 7612 2314 101 0 0 chr20 65685605 65685911 -982094 + AluSx SINE Alu 1 306 -6 1414 248 75 44 chr20 65685911 65686222 -981783 - L1MC4 LINE L1 -430 7612 7269 363 243 36 18 chr20 65686331 65686442 -981563 - L1MC4 LINE L1 -980 7062 6950 556 318 114 8 chr20 65686530 65686705 -981300 - L1MEd LINE L1 -5058 1061 849 848 129 0 43 chr20 65686705 65686844 -981161 - FLAM_C SINE Alu 0 133 1 556 318 114 8 chr20 65686844 65686923 -981082 - L1MEd LINE L1 -5270 849 780 2085 62 0 48 chr20 65688641 65688931 -979074 + AluSc SINE Alu 24 299 -10 2186 121 0 3 chr20 65688940 65689245 -978760 + AluSx SINE Alu 1 304 -8 1809 141 7 46 chr20 65689253 65689558 -978447 + AluJb SINE Alu 1 293 -19 1899 117 53 11 chr20 65690138 65690420 -977585 + AluSx SINE Alu 1 294 -18 1955 134 40 0 chr20 65690420 65690718 -977287 + AluSx SINE Alu 1 310 -2 2149 128 0 0 chr20 65690842 65691139 -976866 + AluSx SINE Alu 1 297 -15 458 308 58 84 chr20 65691274 65691518 -976487 + HAL1b LINE L1 1 250 -5896 2396 70 0 0 chr20 65691518 65691816 -976189 - AluY SINE Alu -13 298 1 458 308 58 84 chr20 65691816 65691924 -976081 + HAL1b LINE L1 250 5288 -858 2500 59 0 0 chr20 65695409 65695716 -972289 + AluY SINE Alu 1 307 -4 236 268 21 52 chr20 65695955 65696052 -971953 + MLT1H LTR MaLR 72 165 -384 278 225 99 49 chr20 65696160 65696302 -971703 + MLT1H LTR MaLR 395 543 -6 2045 126 3 10 chr20 65696500 65696801 -971204 + AluSx SINE Alu 1 299 -13 1523 159 0 114 chr20 65696905 65697238 -970767 + AluJo SINE Alu 1 295 -7 24 32 0 0 chr20 65697322 65697353 -970652 + AT_rich Low_complexity Low_complexity 1 31 0 242 250 102 98 chr20 65697855 65698119 -969886 + MLT1H LTR MaLR 256 520 -29 1181 115 0 0 chr20 65698119 65698284 -969721 - AluY SINE Alu 0 311 147 2183 100 27 0 chr20 65698680 65698981 -969024 - AluSx SINE Alu -3 309 1 8000 46 31 23 chr20 65699237 65699943 -968062 + LTR13 LTR ERVK 1 719 -288 194 0 39 0 chr20 65699943 65699969 -968036 + (TC)n Simple_repeat Simple_repeat 2 28 0 8000 46 31 23 chr20 65699969 65700261 -967744 + LTR13 LTR ERVK 719 1007 0 1921 158 3 7 chr20 65700491 65700795 -967210 - AluJb SINE Alu -9 303 1 234 296 44 7 chr20 65701069 65701204 -966801 + L1ME4a LINE L1 5944 6083 -38 22 70 0 0 chr20 65701240 65701283 -966722 + AT_rich Low_complexity Low_complexity 1 43 0 2164 123 0 0 chr20 65701331 65701632 -966373 + AluSq SINE Alu 1 301 -12 946 204 77 96 chr20 65702011 65702148 -965857 + MLT1A2 LTR MaLR 19 157 -217 1771 162 10 14 chr20 65702148 65702445 -965560 - AluJb SINE Alu -16 296 1 946 204 77 96 chr20 65702445 65702670 -965335 + MLT1A2 LTR MaLR 157 374 0 1053 112 0 0 chr20 65705109 65705261 -962744 - AluSx SINE Alu -4 308 157 809 103 0 0 chr20 65705261 65705368 -962637 - AluSx SINE Alu -206 107 1 21 0 0 0 chr20 65705377 65705398 -962607 + AT_rich Low_complexity Low_complexity 1 21 0 249 272 45 107 chr20 65705789 65706013 -961992 + L1MDb LINE L1 747 956 -5453 388 293 86 9 chr20 65706121 65706237 -961768 + L1MDb LINE L1 1099 1223 -5183 803 143 16 0 chr20 65706245 65706371 -961634 + FRAM SINE Alu 25 152 -24 1191 164 13 55 chr20 65706375 65706563 -961442 + L1MB4 LINE L1 5952 6129 -51 2289 79 33 3 chr20 65706563 65706866 -961139 + AluSq SINE Alu 1 312 -1 1191 164 13 55 chr20 65706866 65706915 -961090 + L1MB4 LINE L1 6129 6179 -1 1881 149 6 16 chr20 65707012 65707327 -960678 + AluJo SINE Alu 1 312 0 2173 106 0 3 chr20 65708685 65708977 -959028 + AluSg SINE Alu 1 291 -19 2081 126 7 10 chr20 65708998 65709300 -958705 + AluSx SINE Alu 1 301 -11 2182 92 0 49 chr20 65709303 65709630 -958375 + AluSx SINE Alu 1 311 -1 2276 69 0 0 chr20 65709884 65710174 -957831 - AluSg SINE Alu -20 290 1 2135 109 10 0 chr20 65710348 65710641 -957364 - AluSx SINE Alu -16 296 1 2128 129 0 0 chr20 65710761 65711064 -956941 - AluSg SINE Alu -7 303 1 22 0 0 0 chr20 65711871 65711893 -956112 + GC_rich Low_complexity Low_complexity 1 22 0 282 194 28 37 chr20 65711912 65712020 -955985 + C-rich Low_complexity Low_complexity 5 111 0 27 29 0 0 chr20 65712086 65712120 -955885 + GC_rich Low_complexity Low_complexity 1 34 0 287 103 0 17 chr20 65712154 65712212 -955793 + (CGG)n Simple_repeat Simple_repeat 1 57 0 28 0 0 0 chr20 65712234 65712262 -955743 + GC_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr20 65712461 65712484 -955521 + GC_rich Low_complexity Low_complexity 1 23 0 718 160 46 30 chr20 65713735 65713866 -954139 + FLAM_C SINE Alu 1 133 0 266 191 32 0 chr20 65714189 65714252 -953753 - MLT1D LTR MaLR -4 501 437 632 142 108 17 chr20 65714252 65714372 -953633 + FLAM_C SINE Alu 1 131 -12 2352 64 0 0 chr20 65714379 65714674 -953331 + AluY SINE Alu 6 300 -11 752 254 84 49 chr20 65714677 65715083 -952922 - MLT1D LTR MaLR -61 444 25 1312 139 25 153 chr20 65715141 65715268 -952737 - AluYb8 SINE Alu 0 308 166 195 69 0 0 chr20 65715268 65715297 -952708 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1312 139 25 153 chr20 65715297 65715311 -952694 - AluYb8 SINE Alu -142 166 152 2820 3 0 0 chr20 65715311 65715621 -952384 + AluY SINE Alu 1 310 -1 1312 139 25 153 chr20 65715621 65715831 -952174 - AluYb8 SINE Alu -156 152 1 2240 100 0 0 chr20 65715863 65716154 -951851 - AluSg SINE Alu -19 291 1 1819 167 7 0 chr20 65716189 65716483 -951522 + AluJo SINE Alu 1 296 -16 2003 122 10 7 chr20 65716486 65716782 -951223 + AluSx SINE Alu 3 299 -13 468 223 10 0 chr20 65716787 65716890 -951115 + LTR39 LTR ERV1 70 173 -610 2419 53 0 10 chr20 65716894 65717193 -950812 + AluY SINE Alu 1 296 -15 1330 96 0 0 chr20 65717193 65717371 -950634 + AluSg/x SINE Alu 134 311 -1 573 188 0 9 chr20 65717378 65717490 -950515 + LTR39 LTR ERV1 172 282 -501 1791 160 3 0 chr20 65717513 65717801 -950204 + AluSx SINE Alu 23 311 -1 1960 122 27 14 chr20 65717813 65718107 -949898 + AluSx SINE Alu 1 298 -14 2184 127 0 0 chr20 65718424 65718731 -949274 - AluSq SINE Alu -6 307 1 868 245 46 25 chr20 65718952 65719234 -948771 + MER21B LTR ERV1 471 758 -105 2628 26 3 0 chr20 65719292 65719602 -948403 + AluY SINE Alu 1 311 0 450 241 18 65 chr20 65719616 65719786 -948219 + Charlie1 DNA MER1_type 1884 2045 -716 2061 110 3 36 chr20 65719789 65720098 -947907 - AluSx SINE Alu -13 299 1 1983 138 20 0 chr20 65720288 65720584 -947421 - AluJo SINE Alu -10 302 1 286 194 16 16 chr20 65720585 65720647 -947358 + MLT1C LTR MaLR 402 463 -4 777 136 40 13 chr20 65720912 65721102 -946903 - MSTD LTR MaLR 0 396 169 362 132 15 29 chr20 65721132 65721200 -946805 - MSTD LTR MaLR -329 67 1 2045 104 21 0 chr20 65721250 65721550 -946455 + AluSq SINE Alu 1 306 0 1090 135 0 6 chr20 65721560 65721723 -946282 + AluSq SINE Alu 137 298 -15 1703 120 24 100 chr20 65721730 65722071 -945934 + AluYb8 SINE Alu 4 318 0 830 262 190 36 chr20 65722071 65722545 -945460 + MLT1F1 LTR MaLR 17 563 -4 2425 70 0 0 chr20 65722887 65723189 -944816 - AluY SINE Alu -9 302 1 2432 72 7 0 chr20 65723196 65723501 -944504 - AluY SINE Alu -4 307 1 998 117 104 0 chr20 65723858 65724021 -943984 - AluSp SINE Alu 0 313 134 2280 73 3 10 chr20 65724021 65724323 -943682 - AluSx SINE Alu -12 300 1 364 221 25 51 chr20 65726963 65727121 -940884 + C-rich Low_complexity Low_complexity 4 157 0 230 114 16 109 chr20 65727123 65727316 -940689 + (CCCCG)n Simple_repeat Simple_repeat 5 179 0 348 103 0 97 chr20 65727336 65727501 -940504 + (CCCCG)n Simple_repeat Simple_repeat 1 149 0 2065 135 3 6 chr20 65728668 65728979 -939026 - AluSx SINE Alu -2 310 1 1308 226 43 12 chr20 65730023 65730346 -937659 + MLT1A1 LTR MaLR 1 333 -32 311 293 6 12 chr20 65730378 65730542 -937463 + (TCTCTG)n Simple_repeat Simple_repeat 3 165 0 2199 121 0 6 chr20 65731067 65731381 -936624 + AluSx SINE Alu 1 312 0 200 163 0 41 chr20 65731381 65731430 -936575 + GA-rich Low_complexity Low_complexity 3 49 0 2347 81 3 0 chr20 65731753 65732051 -935954 - AluY SINE Alu -12 299 1 617 248 69 14 chr20 65732054 65732199 -935806 - FRAM SINE Alu -9 157 5 1165 101 6 0 chr20 65732217 65732376 -935629 - AluSg/x SINE Alu -76 234 75 2174 89 24 3 chr20 65732424 65732717 -935288 + AluSq SINE Alu 1 299 -14 2208 103 0 3 chr20 65732733 65733033 -934972 + AluSg SINE Alu 1 299 -11 375 265 24 0 chr20 65733034 65733117 -934888 + L1MC4 LINE L1 6618 6702 -1340 * 411 278 0 33 chr20 65733057 65733194 -934811 - L1MC4 LINE L1 -1333 6709 6611 * 489 215 16 41 chr20 65733190 65733311 -934694 + L1MC4 LINE L1 6611 6728 -1314 651 220 8 0 chr20 65733316 65733434 -934571 - FLAM_C SINE Alu -24 119 1 2069 133 0 0 chr20 65733763 65734057 -933948 + AluSx SINE Alu 1 294 -18 241 200 86 14 chr20 65734687 65734757 -933248 - MIR3 SINE MIR -21 187 113 2430 75 0 0 chr20 65734832 65735137 -932868 - AluY SINE Alu -4 307 3 2277 91 0 3 chr20 65735139 65735436 -932569 - AluSx SINE Alu -16 296 1 261 70 0 0 chr20 65735437 65735480 -932525 - Alu SINE Alu -259 43 1 220 184 0 0 chr20 65736219 65736257 -931748 + CT-rich Low_complexity Low_complexity 4 41 0 1850 146 3 10 chr20 65736258 65736559 -931446 - AluSq SINE Alu -4 309 11 259 325 50 17 chr20 65736560 65736680 -931325 - MIR SINE MIR -111 151 28 349 376 39 6 chr20 65736931 65737112 -930893 - MIR SINE MIR -19 243 57 23 33 0 0 chr20 65737801 65737831 -930174 + GC_rich Low_complexity Low_complexity 1 30 0 198 71 0 0 chr20 65738736 65738764 -929241 + (GGGGA)n Simple_repeat Simple_repeat 1 28 0 516 204 12 12 chr20 65738793 65738955 -929050 + GA-rich Low_complexity Low_complexity 1 162 0 238 359 7 48 chr20 65739371 65739516 -928489 + MIR3 SINE MIR 6 144 -64 194 330 96 0 chr20 65739655 65739749 -928256 - MIR SINE MIR -119 143 41 677 246 121 27 chr20 65739964 65740361 -927644 + MLT1E3 LTR MaLR 146 624 0 207 310 103 0 chr20 65740626 65740713 -927292 + MIR SINE MIR 51 146 -116 2142 119 0 0 chr20 65741138 65741432 -926573 + AluSq SINE Alu 1 294 -19 2350 99 0 0 chr20 65741492 65741796 -926209 + AluSg SINE Alu 1 304 -6 244 264 19 0 chr20 65741838 65741891 -926114 - L2 LINE L2 0 3272 3219 291 276 26 0 chr20 65742086 65742162 -925843 + MIR SINE MIR 87 164 -98 2191 98 3 3 chr20 65742162 65742458 -925547 + AluSq SINE Alu 1 296 -17 798 192 119 15 chr20 65742458 65742704 -925301 - THE1C LTR MaLR -151 281 1 200 262 66 0 chr20 65743339 65743400 -924605 - L2 LINE L2 -685 2629 2565 195 353 44 0 chr20 65744021 65744089 -923916 - MIR SINE MIR -111 151 81 3906 199 35 51 chr20 65744998 65745983 -922022 - LTR5 LTR ERVK 0 969 1 658 250 127 0 chr20 65748369 65748589 -919416 + MER68 LTR ERV1 10 257 -305 334 252 142 0 chr20 65748597 65748724 -919281 + MER68 LTR ERV1 369 513 -49 261 163 0 0 chr20 65750408 65750457 -917548 + (TG)n Simple_repeat Simple_repeat 1 49 0 1767 162 21 0 chr20 65751854 65752138 -915867 - AluJb SINE Alu -22 290 1 2638 36 0 0 chr20 65752141 65752447 -915558 - AluY SINE Alu -5 306 1 280 300 244 6 chr20 65753643 65753803 -914202 - L2 LINE L2 -17 3296 3099 276 275 88 0 chr20 65754001 65754081 -913924 + MER5B DNA MER1_type 6 92 -86 403 262 49 0 chr20 65754085 65754207 -913798 + L1M4 LINE L1 4629 4756 -1390 1036 133 6 0 chr20 65754297 65754455 -913550 - AluSg/x SINE Alu -17 295 137 876 245 98 76 chr20 65754468 65754980 -913025 + L1M4 LINE L1 4856 5380 -793 567 294 102 8 chr20 65755541 65755776 -912229 + L1ME1 LINE L1 5308 5564 -602 920 114 8 0 chr20 65755839 65755971 -912034 + FLAM_C SINE Alu 1 133 0 299 292 87 80 chr20 65755978 65756190 -911815 + L1ME1 LINE L1 5676 5892 -274 2045 147 0 0 chr20 65756190 65756496 -911509 - AluSg SINE Alu -4 306 1 299 292 87 80 chr20 65756496 65756547 -911458 + L1ME1 LINE L1 5892 5941 -225 2245 63 0 33 chr20 65756626 65756928 -911077 - AluY SINE Alu -19 292 1 223 286 29 86 chr20 65756940 65757013 -910992 + MER5B DNA MER1_type 47 115 -63 2188 89 0 0 chr20 65757013 65757319 -910686 - AluSg SINE Alu 0 306 1 223 286 29 86 chr20 65757319 65757349 -910656 + MER5B DNA MER1_type 115 145 -33 801 138 0 0 chr20 65758129 65758245 -909760 + AluSg/x SINE Alu 178 293 -19 2236 108 0 7 chr20 65758249 65758556 -909449 + AluSc SINE Alu 1 305 -4 2079 124 0 0 chr20 65758577 65758876 -909129 - AluJb SINE Alu -13 299 1 1254 202 39 0 chr20 65759598 65759855 -908150 + AluJb SINE Alu 36 302 -10 2366 76 10 0 chr20 65760039 65760342 -907663 - AluSp SINE Alu -7 306 1 204 40 0 0 chr20 65760640 65760665 -907340 + (TA)n Simple_repeat Simple_repeat 1 25 0 762 236 0 0 chr20 65760671 65760815 -907190 - FRAM SINE Alu -32 144 1 804 145 0 96 chr20 65761220 65761386 -906619 - AluJb SINE Alu -26 286 137 351 341 82 11 chr20 65761602 65761784 -906221 - L1MC5 LINE L1 -722 7239 7045 2188 81 3 7 chr20 65761791 65762076 -905929 + AluSc SINE Alu 1 284 -25 462 298 74 0 chr20 65762199 65762414 -905591 - L1MC5 LINE L1 -1097 6864 6634 1749 170 16 3 chr20 65762469 65762775 -905230 + AluSx SINE Alu 1 310 -2 335 200 25 36 chr20 65763706 65764050 -903955 + (CA)n Simple_repeat Simple_repeat 1 340 0 1788 161 0 7 chr20 65768109 65768400 -899605 - AluJo SINE Alu -23 289 1 275 254 0 14 chr20 65768612 65768683 -899322 + (CACG)n Simple_repeat Simple_repeat 3 72 0 2269 65 34 3 chr20 65769486 65769777 -898228 - AluY SINE Alu -11 300 1 985 94 0 0 chr20 65769780 65769907 -898098 - AluSq/x SINE Alu -185 127 1 312 223 0 134 chr20 65769938 65770022 -897983 - L1M4 LINE L1 -1487 4659 4592 1628 163 7 33 chr20 65770022 65770322 -897683 - AluJb SINE Alu -20 292 1 312 223 0 134 chr20 65770322 65770349 -897656 - L1M4 LINE L1 -1554 4592 4563 1191 90 0 0 chr20 65778558 65778849 -889156 + (CCA)n Simple_repeat Simple_repeat 1 291 0 1568 165 70 0 chr20 65787554 65787827 -880178 + AluJb SINE Alu 1 292 -20 1575 197 142 44 chr20 65790835 65791286 -876719 + LTR42 LTR ERVL 1 495 0 216 321 18 9 chr20 65792219 65792331 -875674 + L2 LINE L2 2378 2490 -824 34 89 0 0 chr20 65793316 65793406 -874599 + GC_rich Low_complexity Low_complexity 1 90 0 205 156 0 0 chr20 65794015 65794047 -873958 + GA-rich Low_complexity Low_complexity 3 34 0 1751 146 4 0 chr20 65794438 65794712 -873293 + AluSx SINE Alu 1 275 -37 1081 159 5 11 chr20 65794748 65794937 -873068 - AluJb SINE Alu -1 311 124 2482 57 0 0 chr20 65794944 65795242 -872763 - AluY SINE Alu -13 298 1 2024 116 0 7 chr20 65795242 65795534 -872471 - AluSg1 SINE Alu -19 290 1 292 263 19 76 chr20 65795565 65795827 -872178 - L1MC5 LINE L1 -30 7931 7685 1402 147 17 13 chr20 65796105 65796336 -871669 - AluJb SINE Alu -9 303 72 386 322 87 0 chr20 65796370 65796519 -871486 - MIR SINE MIR -22 240 79 1963 95 67 18 chr20 65796683 65796966 -871039 - AluSq SINE Alu -16 297 1 3135 192 58 21 chr20 65796967 65797695 -870310 - L1M4c LINE L1 -864 5780 5013 2053 123 10 10 chr20 65797695 65798005 -870000 + AluSx SINE Alu 1 310 -2 3135 192 58 21 chr20 65798005 65798142 -869863 - L1M4c LINE L1 -1631 5013 4883 1250 115 6 0 chr20 65798146 65798320 -869685 - AluSg/x SINE Alu -4 308 134 2169 92 3 7 chr20 65798320 65798613 -869392 - AluY SINE Alu -19 292 1 1461 178 34 194 chr20 65798614 65798671 -869334 - L1M4c LINE L1 -1765 4879 4815 2314 96 0 0 chr20 65798671 65798973 -869032 + AluSq SINE Alu 1 302 -11 1461 178 34 194 chr20 65798973 65799226 -868779 - L1M4c LINE L1 -1829 4815 4523 2027 142 0 3 chr20 65799226 65799528 -868477 + AluSx SINE Alu 1 301 -11 1461 178 34 194 chr20 65799528 65799731 -868274 - L1M4c LINE L1 -2121 4523 4289 1804 154 11 3 chr20 65799731 65800016 -867989 - AluJo SINE Alu -19 293 7 1461 178 34 194 chr20 65800016 65800179 -867826 - L1M4c LINE L1 -2355 4289 4102 845 138 0 0 chr20 65800179 65800302 -867703 - AluJb SINE Alu -178 134 12 1461 178 34 194 chr20 65800302 65800313 -867692 - L1M4c LINE L1 -2542 4102 4091 2147 97 7 3 chr20 65800313 65800613 -867392 - AluSg SINE Alu -1 309 9 1461 178 34 194 chr20 65800613 65800918 -867087 - L1M4c LINE L1 -2553 4091 3739 189 0 0 0 chr20 65800918 65800939 -867066 + (GA)n Simple_repeat Simple_repeat 2 22 0 1461 178 34 194 chr20 65800939 65801109 -866896 - L1M4c LINE L1 -2905 3739 3544 2032 130 0 10 chr20 65801109 65801410 -866595 - AluSx SINE Alu -14 298 1 1461 178 34 194 chr20 65801410 65801584 -866421 - L1M4c LINE L1 -3100 3544 3771 2084 126 10 10 chr20 65801584 65801758 -866247 - AluSx SINE Alu -2 310 134 2122 125 3 0 chr20 65801758 65802062 -865943 - AluSx SINE Alu -7 305 1 2084 126 10 10 chr20 65802062 65802197 -865808 - AluSx SINE Alu -177 135 1 1461 178 34 194 chr20 65802197 65802404 -865601 - L1M4c LINE L1 -2872 3772 3534 883 83 41 55 chr20 65802409 65802554 -865451 - AluSg/x SINE Alu 0 312 170 606 192 41 82 chr20 65802568 65802652 -865353 - L1M4c LINE L1 -3101 3543 3457 1541 182 12 49 chr20 65802652 65802850 -865155 - AluJo SINE Alu 0 312 129 2329 96 0 0 chr20 65802850 65803151 -864854 + AluSq SINE Alu 1 301 -12 1541 182 12 49 chr20 65803151 65803276 -864729 - AluJo SINE Alu -183 129 1 606 192 41 82 chr20 65803276 65803410 -864595 - L1M4c LINE L1 -3187 3457 3334 1831 151 41 7 chr20 65803414 65803706 -864299 - AluSx SINE Alu -10 302 1 773 177 15 0 chr20 65803711 65803841 -864164 - FLAM_C SINE Alu -1 132 1 3702 209 31 81 chr20 65803841 65803870 -864135 - L1M4 LINE L1 -4787 1859 1830 2432 74 0 0 chr20 65803870 65804168 -863837 + AluY SINE Alu 1 298 -13 3702 209 31 81 chr20 65804168 65804813 -863192 - L1M4 LINE L1 -4816 1830 1154 1982 155 0 9 chr20 65804813 65805129 -862876 - AluSq SINE Alu 0 313 1 3702 209 31 81 chr20 65805129 65805237 -862768 - L1M4 LINE L1 -5492 1154 1042 2105 115 0 7 chr20 65805237 65805542 -862463 - AluSc SINE Alu -6 303 1 1541 212 3 10 chr20 65805544 65805841 -862164 - AluJo SINE Alu -17 295 1 3702 209 31 81 chr20 65805841 65806157 -861848 - L1M4 LINE L1 -5605 1041 711 2232 122 0 0 chr20 65806157 65806468 -861537 + AluSx SINE Alu 1 311 -1 3702 209 31 81 chr20 65806468 65806820 -861185 - L1M4 LINE L1 -5935 711 460 2321 90 10 0 chr20 65806820 65807121 -860884 + AluSx SINE Alu 1 304 -8 3702 209 31 81 chr20 65807121 65807246 -860759 - L1M4 LINE L1 -6186 460 330 380 208 39 23 chr20 65807596 65807726 -860279 - L1M4c LINE L1 -4279 2546 2415 2078 92 18 0 chr20 65807729 65808011 -859994 - AluSx SINE Alu -19 293 7 1282 249 55 65 chr20 65808731 65808855 -859150 - L1M4c LINE L1 -4427 2398 2274 1493 172 28 35 chr20 65808855 65809140 -858865 + AluJb SINE Alu 9 291 -21 1282 249 55 65 chr20 65809140 65809152 -858853 - L1M4c LINE L1 -4551 2274 2263 2152 116 3 0 chr20 65809152 65809453 -858552 + AluSx SINE Alu 11 312 0 822 158 0 23 chr20 65809460 65809593 -858412 + FLAM_C SINE Alu 3 132 -1 1282 249 55 65 chr20 65809593 65809732 -858273 - L1M4c LINE L1 -4568 2257 2118 1938 139 10 10 chr20 65809732 65810027 -857978 - AluSg SINE Alu -15 295 1 2464 53 0 3 chr20 65810036 65810340 -857665 - AluY SINE Alu -8 303 1 1282 249 55 65 chr20 65810340 65810805 -857200 - L1M4c LINE L1 -4715 2110 1509 247 227 40 0 chr20 65810918 65810993 -857012 + C-rich Low_complexity Low_complexity 6 83 0 2065 135 3 6 chr20 65812133 65812444 -855561 - AluSx SINE Alu -2 310 1 1308 226 43 12 chr20 65813488 65813811 -854194 + MLT1A1 LTR MaLR 1 333 -32 311 293 6 12 chr20 65813843 65814007 -853998 + (TCTCTG)n Simple_repeat Simple_repeat 3 165 0 2199 121 0 6 chr20 65814532 65814846 -853159 + AluSx SINE Alu 1 312 0 200 163 0 41 chr20 65814846 65814895 -853110 + GA-rich Low_complexity Low_complexity 3 49 0 2347 81 3 0 chr20 65815218 65815516 -852489 - AluY SINE Alu -12 299 1 617 248 69 14 chr20 65815519 65815664 -852341 - FRAM SINE Alu -9 157 5 1165 101 6 0 chr20 65815682 65815841 -852164 - AluSg/x SINE Alu -76 234 75 2174 89 24 3 chr20 65815889 65816182 -851823 + AluSq SINE Alu 1 299 -14 2208 103 0 3 chr20 65816198 65816498 -851507 + AluSg SINE Alu 1 299 -11 369 294 11 11 chr20 65816499 65816591 -851414 + L1MC4 LINE L1 6618 6709 -1333 * 410 231 12 32 chr20 65816584 65816711 -851294 + L1MC4 LINE L1 6612 6702 -1340 * 411 268 0 31 chr20 65816651 65816748 -851257 - L1MC4 LINE L1 -1338 6704 6611 * 489 215 16 41 chr20 65816744 65816865 -851140 + L1MC4 LINE L1 6611 6728 -1314 651 220 8 0 chr20 65816870 65816988 -851017 - FLAM_C SINE Alu -24 119 1 2069 133 0 0 chr20 65817317 65817611 -850394 + AluSx SINE Alu 1 294 -18 241 200 86 14 chr20 65818241 65818311 -849694 - MIR3 SINE MIR -21 187 113 2430 75 0 0 chr20 65818386 65818691 -849314 - AluY SINE Alu -4 307 3 2286 91 0 3 chr20 65818693 65818991 -849014 - AluSx SINE Alu -15 297 1 261 70 0 0 chr20 65818992 65819035 -848970 - Alu SINE Alu -259 43 1 220 184 0 0 chr20 65819774 65819812 -848193 + CT-rich Low_complexity Low_complexity 4 41 0 1850 146 3 10 chr20 65819813 65820114 -847891 - AluSq SINE Alu -4 309 11 259 325 50 17 chr20 65820115 65820235 -847770 - MIR SINE MIR -111 151 28 349 376 39 6 chr20 65820486 65820667 -847338 - MIR SINE MIR -19 243 57 23 33 0 0 chr20 65821356 65821386 -846619 + GC_rich Low_complexity Low_complexity 1 30 0 198 71 0 0 chr20 65822291 65822319 -845686 + (GGGGA)n Simple_repeat Simple_repeat 1 28 0 516 204 12 12 chr20 65822348 65822510 -845495 + GA-rich Low_complexity Low_complexity 1 162 0 238 359 7 48 chr20 65822926 65823071 -844934 + MIR3 SINE MIR 6 144 -64 194 330 96 0 chr20 65823210 65823304 -844701 - MIR SINE MIR -119 143 41 677 246 121 27 chr20 65823519 65823916 -844089 + MLT1E3 LTR MaLR 146 624 0 207 310 103 0 chr20 65824181 65824268 -843737 + MIR SINE MIR 51 146 -116 2142 119 0 0 chr20 65824693 65824987 -843018 + AluSq SINE Alu 1 294 -19 2350 99 0 0 chr20 65825047 65825351 -842654 + AluSg SINE Alu 1 304 -6 244 264 19 0 chr20 65825393 65825446 -842559 - L2 LINE L2 0 3272 3219 291 276 26 0 chr20 65825641 65825717 -842288 + MIR SINE MIR 87 164 -98 2191 98 3 3 chr20 65825717 65826013 -841992 + AluSq SINE Alu 1 296 -17 798 192 119 15 chr20 65826013 65826259 -841746 - THE1C LTR MaLR -151 281 1 200 262 66 0 chr20 65826894 65826955 -841050 - L2 LINE L2 -685 2629 2565 195 353 44 0 chr20 65827576 65827644 -840361 - MIR SINE MIR -111 151 81 3921 198 35 51 chr20 65828553 65829538 -838467 - LTR5 LTR ERVK 0 969 1 658 250 127 0 chr20 65831924 65832144 -835861 + MER68 LTR ERV1 10 257 -305 334 252 142 0 chr20 65832152 65832279 -835726 + MER68 LTR ERV1 369 513 -49 261 163 0 0 chr20 65833963 65834012 -833993 + (TG)n Simple_repeat Simple_repeat 1 49 0 1754 166 21 0 chr20 65835409 65835693 -832312 - AluJb SINE Alu -22 290 1 2638 36 0 0 chr20 65835696 65836002 -832003 - AluY SINE Alu -5 306 1 290 294 244 6 chr20 65837198 65837358 -830647 - L2 LINE L2 -17 3296 3099 276 275 88 0 chr20 65837556 65837636 -830369 + MER5B DNA MER1_type 6 92 -86 403 262 49 0 chr20 65837640 65837762 -830243 + L1M4 LINE L1 4629 4756 -1390 1036 133 6 0 chr20 65837852 65838010 -829995 - AluSg/x SINE Alu -17 293 135 876 244 102 76 chr20 65838023 65838535 -829470 + L1M4 LINE L1 4856 5380 -793 567 294 102 8 chr20 65839267 65839502 -828503 + L1ME1 LINE L1 5308 5564 -602 920 114 8 0 chr20 65839565 65839697 -828308 + FLAM_C SINE Alu 1 133 0 299 292 87 80 chr20 65839704 65839916 -828089 + L1ME1 LINE L1 5676 5892 -274 2045 147 0 0 chr20 65839916 65840222 -827783 - AluSg SINE Alu -4 306 1 299 292 87 80 chr20 65840222 65840273 -827732 + L1ME1 LINE L1 5892 5941 -225 2245 63 0 33 chr20 65840352 65840654 -827351 - AluY SINE Alu -19 292 1 223 286 29 86 chr20 65840666 65840739 -827266 + MER5B DNA MER1_type 47 115 -63 2188 89 0 0 chr20 65840739 65841045 -826960 - AluSg SINE Alu 0 306 1 223 286 29 86 chr20 65841045 65841075 -826930 + MER5B DNA MER1_type 115 145 -33 801 138 0 0 chr20 65841855 65841971 -826034 + AluSg/x SINE Alu 178 293 -19 2236 108 0 7 chr20 65841975 65842282 -825723 + AluSc SINE Alu 1 305 -4 2079 124 0 0 chr20 65842303 65842602 -825403 - AluJb SINE Alu -13 299 1 1253 202 39 0 chr20 65843324 65843581 -824424 + AluJb SINE Alu 36 302 -10 2366 76 10 0 chr20 65843765 65844068 -823937 - AluSp SINE Alu -7 306 1 204 40 0 0 chr20 65844366 65844391 -823614 + (TA)n Simple_repeat Simple_repeat 1 25 0 762 236 0 0 chr20 65844397 65844541 -823464 - FRAM SINE Alu -32 144 1 804 145 0 96 chr20 65844946 65845112 -822893 - AluJb SINE Alu -26 286 137 351 341 82 11 chr20 65845328 65845510 -822495 - L1MC5 LINE L1 -722 7239 7045 2202 77 3 7 chr20 65845517 65845802 -822203 + AluSc SINE Alu 1 284 -25 533 272 74 9 chr20 65845926 65846143 -821862 - L1MC5 LINE L1 -1097 6864 6634 1749 170 16 3 chr20 65846198 65846504 -821501 + AluSx SINE Alu 1 310 -2 335 200 25 36 chr20 65847435 65847779 -820226 + (CA)n Simple_repeat Simple_repeat 1 340 0 1788 161 0 7 chr20 65851838 65852129 -815876 - AluJo SINE Alu -23 289 1 275 254 0 14 chr20 65852341 65852412 -815593 + (CACG)n Simple_repeat Simple_repeat 3 72 0 2269 65 34 3 chr20 65853215 65853506 -814499 - AluY SINE Alu -11 300 1 985 94 0 0 chr20 65853509 65853636 -814369 - AluSq/x SINE Alu -185 127 1 312 223 0 134 chr20 65853667 65853751 -814254 - L1M4 LINE L1 -1487 4659 4592 1628 163 7 33 chr20 65853751 65854051 -813954 - AluJb SINE Alu -20 292 1 312 223 0 134 chr20 65854051 65854078 -813927 - L1M4 LINE L1 -1554 4592 4563 1191 91 0 0 chr20 65862287 65862632 -805373 + (CCA)n Simple_repeat Simple_repeat 1 345 0 1568 165 70 0 chr20 65871322 65871595 -796410 + AluJb SINE Alu 1 292 -20 1575 197 142 44 chr20 65874603 65875054 -792951 + LTR42 LTR ERVL 1 495 0 216 321 18 9 chr20 65875987 65876099 -791906 + L2 LINE L2 2378 2490 -824 34 89 0 0 chr20 65877084 65877174 -790831 + GC_rich Low_complexity Low_complexity 1 90 0 205 156 0 0 chr20 65877783 65877815 -790190 + GA-rich Low_complexity Low_complexity 3 34 0 1751 146 4 0 chr20 65878206 65878480 -789525 + AluSx SINE Alu 1 275 -37 1081 159 5 11 chr20 65878516 65878705 -789300 - AluJb SINE Alu -1 311 124 2468 60 0 0 chr20 65878712 65879010 -788995 - AluY SINE Alu -13 298 1 2000 120 0 7 chr20 65879010 65879302 -788703 - AluSg1 SINE Alu -19 290 1 292 263 19 76 chr20 65879333 65879595 -788410 - L1MC5 LINE L1 -30 7931 7685 1409 147 17 13 chr20 65879873 65880105 -787900 - AluJb SINE Alu -8 304 72 397 315 87 0 chr20 65880139 65880288 -787717 - MIR SINE MIR -22 240 79 1983 92 67 18 chr20 65880452 65880735 -787270 - AluSq SINE Alu -16 297 1 3135 192 58 21 chr20 65880736 65881464 -786541 - L1M4c LINE L1 -864 5780 5013 2082 119 10 10 chr20 65881464 65881774 -786231 + AluSx SINE Alu 1 310 -2 3135 192 58 21 chr20 65881774 65881911 -786094 - L1M4c LINE L1 -1631 5013 4883 1228 121 6 0 chr20 65881915 65882088 -785917 - AluSg/x SINE Alu -5 305 132 2169 92 3 7 chr20 65882088 65882381 -785624 - AluY SINE Alu -19 292 1 1484 178 34 193 chr20 65882381 65882439 -785566 - L1M4c LINE L1 -1764 4880 4814 2314 96 0 0 chr20 65882439 65882741 -785264 + AluSq SINE Alu 1 302 -11 1484 178 34 193 chr20 65882741 65882994 -785011 - L1M4c LINE L1 -1830 4814 4523 2036 142 0 3 chr20 65882994 65883297 -784708 + AluSx SINE Alu 1 302 -10 1484 178 34 193 chr20 65883297 65883500 -784505 - L1M4c LINE L1 -2121 4523 4290 1804 154 11 3 chr20 65883500 65883785 -784220 - AluJo SINE Alu -19 293 7 1484 178 34 193 chr20 65883785 65883948 -784057 - L1M4c LINE L1 -2354 4290 4103 820 146 0 0 chr20 65883948 65884071 -783934 - AluJb SINE Alu -178 134 12 1484 178 34 193 chr20 65884071 65884082 -783923 - L1M4c LINE L1 -2541 4103 4092 2158 93 7 3 chr20 65884082 65884382 -783623 - AluSg SINE Alu -1 309 9 1484 178 34 193 chr20 65884382 65884685 -783320 - L1M4c LINE L1 -2552 4092 3743 225 0 0 0 chr20 65884685 65884710 -783295 + (GA)n Simple_repeat Simple_repeat 2 26 0 1484 178 34 193 chr20 65884710 65884880 -783125 - L1M4c LINE L1 -2901 3743 3548 2032 130 0 10 chr20 65884880 65885181 -782824 - AluSx SINE Alu -14 298 1 1484 178 34 193 chr20 65885181 65885355 -782650 - L1M4c LINE L1 -3096 3548 3771 2084 126 10 10 chr20 65885355 65885529 -782476 - AluSx SINE Alu -2 310 134 2106 128 3 0 chr20 65885529 65885833 -782172 - AluSx SINE Alu -7 305 1 2084 126 10 10 chr20 65885833 65885968 -782037 - AluSx SINE Alu -177 135 1 1484 178 34 193 chr20 65885968 65886175 -781830 - L1M4c LINE L1 -2872 3772 3534 883 83 41 55 chr20 65886181 65886326 -781679 - AluSg/x SINE Alu 0 310 168 623 203 42 52 chr20 65886340 65886417 -781588 - L1M4c LINE L1 -3101 3543 3467 1552 178 12 50 chr20 65886417 65886612 -781393 - AluJo SINE Alu -3 309 129 2329 96 0 0 chr20 65886612 65886913 -781092 + AluSq SINE Alu 1 301 -12 1552 178 12 50 chr20 65886913 65887038 -780967 - AluJo SINE Alu -183 129 1 623 203 42 52 chr20 65887038 65887172 -780833 - L1M4c LINE L1 -3177 3467 3334 1836 148 37 7 chr20 65887176 65887473 -780532 - AluSx SINE Alu -6 306 1 773 177 15 0 chr20 65887478 65887608 -780397 - FLAM_C SINE Alu -1 132 1 3702 209 31 81 chr20 65887608 65887637 -780368 - L1M4 LINE L1 -4787 1859 1830 2401 78 0 0 chr20 65887637 65887933 -780072 + AluY SINE Alu 1 296 -15 3702 209 31 81 chr20 65887933 65888578 -779427 - L1M4 LINE L1 -4816 1830 1154 1998 152 0 9 chr20 65888578 65888894 -779111 - AluSq SINE Alu 0 313 1 3702 209 31 81 chr20 65888894 65889002 -779003 - L1M4 LINE L1 -5492 1154 1042 2105 115 0 7 chr20 65889002 65889307 -778698 - AluSc SINE Alu -6 303 1 1541 212 3 10 chr20 65889309 65889606 -778399 - AluJo SINE Alu -17 295 1 3702 209 31 81 chr20 65889606 65889922 -778083 - L1M4 LINE L1 -5605 1041 711 2241 122 0 0 chr20 65889922 65890234 -777771 + AluSx SINE Alu 1 312 0 3702 209 31 81 chr20 65890234 65890586 -777419 - L1M4 LINE L1 -5935 711 460 2321 90 10 0 chr20 65890586 65890887 -777118 + AluSx SINE Alu 1 304 -8 3702 209 31 81 chr20 65890887 65891012 -776993 - L1M4 LINE L1 -6186 460 330 230 301 21 0 chr20 65891265 65891358 -776647 - L1M4 LINE L1 -6443 99 5 363 215 39 23 chr20 65891362 65891492 -776513 - L1M4c LINE L1 -4279 2546 2415 2078 92 18 0 chr20 65891495 65891777 -776228 - AluSx SINE Alu -19 293 7 1315 241 85 87 chr20 65892553 65892677 -775328 - L1M4c LINE L1 -4427 2398 2275 1493 172 28 35 chr20 65892677 65892962 -775043 + AluJb SINE Alu 9 291 -21 1315 241 85 87 chr20 65892962 65892974 -775031 - L1M4c LINE L1 -4550 2275 2264 2152 116 3 0 chr20 65892974 65893275 -774730 + AluSx SINE Alu 11 312 0 838 150 0 23 chr20 65893282 65893415 -774590 + FLAM_C SINE Alu 3 132 -1 1315 241 85 87 chr20 65893415 65893554 -774451 - L1M4c LINE L1 -4567 2258 2120 1946 138 10 10 chr20 65893554 65893850 -774155 - AluSg SINE Alu -14 296 1 2466 50 0 3 chr20 65893859 65894162 -773843 - AluY SINE Alu -9 302 1 1315 241 85 87 chr20 65894162 65894691 -773314 - L1M4c LINE L1 -4713 2112 1583 1980 116 0 20 chr20 65894691 65895017 -772988 - AluSq SINE Alu 0 320 1 1315 241 85 87 chr20 65895017 65895083 -772922 - L1M4c LINE L1 -5242 1583 1518 2182 81 0 7 chr20 65895083 65895366 -772639 - AluSx SINE Alu -18 294 14 2033 108 0 36 chr20 65895376 65895705 -772300 - AluSx SINE Alu 0 312 1 1957 160 12 21 chr20 65895707 65896044 -771961 - L1MC1 LINE L1 -10 6323 5990 1315 241 85 87 chr20 65896044 65896106 -771899 - L1M4c LINE L1 -5317 1508 1302 1626 134 0 4 chr20 65896107 65896360 -771645 - AluSx SINE Alu 0 312 61 1381 136 5 0 chr20 65896363 65896569 -771436 + AluSg/x SINE Alu 97 303 -9 763 243 152 20 chr20 65896570 65896905 -771100 - L1M4b LINE L1 -5253 1694 1274 2075 120 0 13 chr20 65896905 65897214 -770791 - AluY SINE Alu -6 305 1 763 243 152 20 chr20 65897214 65897295 -770710 - L1M4b LINE L1 -5673 1274 1205 330 329 25 78 chr20 65897649 65897892 -770113 - L1M4b LINE L1 -6246 609 380 2225 113 7 0 chr20 65897898 65898208 -769797 - AluSx SINE Alu 0 312 1 452 325 76 68 chr20 65898259 65898656 -769349 - L1M4 LINE L1 -1100 5046 4647 1374 165 9 4 chr20 65898663 65898893 -769112 + AluJb SINE Alu 47 277 -35 252 0 0 0 chr20 65898899 65898927 -769078 + (CA)n Simple_repeat Simple_repeat 1 28 0 304 195 122 12 chr20 65898933 65899015 -768990 - L1ME LINE L1 -481 5640 5550 2208 82 10 0 chr20 65899369 65899660 -768345 - AluSg SINE Alu -16 294 1 441 0 0 0 chr20 65899801 65899850 -768155 + (TC)n Simple_repeat Simple_repeat 2 50 0 189 0 0 0 chr20 65899849 65899870 -768135 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 209 125 0 21 chr20 65900147 65900195 -767810 + (TG)n Simple_repeat Simple_repeat 1 47 0 316 291 5 63 chr20 65900281 65900470 -767535 + (TG)n Simple_repeat Simple_repeat 2 179 0 252 286 0 48 chr20 65900491 65900617 -767388 + (TG)n Simple_repeat Simple_repeat 2 121 0 1087 171 45 2 chr20 65900625 65900910 -767095 - MER2 DNA MER2_type 0 345 3 184 219 24 37 chr20 65900910 65900992 -767013 + (TATG)n Simple_repeat Simple_repeat 1 81 0 279 266 0 0 chr20 65901023 65901136 -766869 + (TG)n Simple_repeat Simple_repeat 1 113 0 582 270 3 3 chr20 65901150 65901771 -766234 + (TG)n Simple_repeat Simple_repeat 1 621 0 741 208 0 0 chr20 65901819 65901997 -766008 + (TG)n Simple_repeat Simple_repeat 2 179 0 228 135 0 0 chr20 65903075 65903112 -764893 + (TG)n Simple_repeat Simple_repeat 1 37 0 28 0 0 0 chr20 65906940 65906968 -761037 + GC_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr20 65908374 65908407 -759598 + GC_rich Low_complexity Low_complexity 1 33 0 34 72 0 0 chr20 65908478 65908547 -759458 + GC_rich Low_complexity Low_complexity 1 69 0 417 109 0 0 chr20 65908581 65908645 -759360 + (CGGGG)n Simple_repeat Simple_repeat 2 65 0 29 0 0 0 chr20 65908651 65908680 -759325 + GC_rich Low_complexity Low_complexity 1 29 0 182 37 37 0 chr20 65908698 65908725 -759280 + (CCCGG)n Simple_repeat Simple_repeat 1 28 0 39 98 0 0 chr20 65908763 65908886 -759119 + GC_rich Low_complexity Low_complexity 1 123 0 53 90 0 0 chr20 65908985 65909129 -758876 + GC_rich Low_complexity Low_complexity 1 144 0 23 0 0 0 chr20 65909344 65909367 -758638 + GC_rich Low_complexity Low_complexity 1 23 0 211 193 0 53 chr20 65911374 65911431 -756574 + C-rich Low_complexity Low_complexity 2 55 0 1568 165 70 0 chr20 65969971 65970244 -697761 + AluJb SINE Alu 1 292 -20 1575 197 142 44 chr20 65973253 65973704 -694301 + LTR42 LTR ERVL 1 495 0 216 321 18 9 chr20 65974637 65974749 -693256 + L2 LINE L2 2378 2490 -824 34 89 0 0 chr20 65975734 65975824 -692181 + GC_rich Low_complexity Low_complexity 1 90 0 205 156 0 0 chr20 65976433 65976465 -691540 + GA-rich Low_complexity Low_complexity 3 34 0 1751 146 4 0 chr20 65976856 65977130 -690875 + AluSx SINE Alu 1 275 -37 1081 159 5 11 chr20 65977166 65977355 -690650 - AluJb SINE Alu -1 311 124 2468 60 0 0 chr20 65977362 65977660 -690345 - AluY SINE Alu -13 298 1 2000 120 0 7 chr20 65977660 65977952 -690053 - AluSg1 SINE Alu -19 290 1 292 263 19 76 chr20 65977983 65978245 -689760 - L1MC5 LINE L1 -30 7931 7685 1409 147 17 13 chr20 65978523 65978755 -689250 - AluJb SINE Alu -8 304 72 397 315 87 0 chr20 65978789 65978938 -689067 - MIR SINE MIR -22 240 79 1983 92 67 18 chr20 65979102 65979385 -688620 - AluSq SINE Alu -16 297 1 3135 192 58 21 chr20 65979386 65980114 -687891 - L1M4c LINE L1 -864 5780 5013 2082 119 10 10 chr20 65980114 65980424 -687581 + AluSx SINE Alu 1 310 -2 3135 192 58 21 chr20 65980424 65980561 -687444 - L1M4c LINE L1 -1631 5013 4883 1228 121 6 0 chr20 65980565 65980738 -687267 - AluSg/x SINE Alu -5 305 132 2186 89 3 7 chr20 65980738 65981031 -686974 - AluY SINE Alu -19 292 1 1484 178 34 192 chr20 65981031 65981089 -686916 - L1M4c LINE L1 -1764 4880 4815 2314 96 0 0 chr20 65981089 65981391 -686614 + AluSq SINE Alu 1 302 -11 1484 178 34 192 chr20 65981391 65981644 -686361 - L1M4c LINE L1 -1829 4815 4524 2036 142 0 3 chr20 65981644 65981947 -686058 + AluSx SINE Alu 1 302 -10 1484 178 34 192 chr20 65981947 65982150 -685855 - L1M4c LINE L1 -2120 4524 4291 1804 154 11 3 chr20 65982150 65982435 -685570 - AluJo SINE Alu -19 293 7 1484 178 34 192 chr20 65982435 65982598 -685407 - L1M4c LINE L1 -2353 4291 4104 820 146 0 0 chr20 65982598 65982721 -685284 - AluJb SINE Alu -178 134 12 2149 96 7 3 chr20 65982730 65983031 -684974 - AluSg SINE Alu 0 310 9 1484 178 34 192 chr20 65983031 65983334 -684671 - L1M4c LINE L1 -2549 4095 3746 225 0 0 0 chr20 65983334 65983359 -684646 + (GA)n Simple_repeat Simple_repeat 2 26 0 1484 178 34 192 chr20 65983359 65983529 -684476 - L1M4c LINE L1 -2898 3746 3551 2032 130 0 10 chr20 65983529 65983830 -684175 - AluSx SINE Alu -14 298 1 1484 178 34 192 chr20 65983830 65984004 -684001 - L1M4c LINE L1 -3093 3551 3771 2068 129 10 10 chr20 65984004 65984178 -683827 - AluSx SINE Alu -2 310 134 2106 128 3 0 chr20 65984178 65984482 -683523 - AluSx SINE Alu -7 305 1 2068 129 10 10 chr20 65984482 65984617 -683388 - AluSx SINE Alu -177 135 1 1484 178 34 192 chr20 65984617 65984824 -683181 - L1M4c LINE L1 -2872 3772 3534 883 83 41 55 chr20 65984830 65984975 -683030 - AluSg/x SINE Alu 0 310 168 623 203 42 52 chr20 65984989 65985066 -682939 - L1M4c LINE L1 -3101 3543 3467 1552 178 12 50 chr20 65985066 65985261 -682744 - AluJo SINE Alu -3 309 129 2329 96 0 0 chr20 65985261 65985562 -682443 + AluSq SINE Alu 1 301 -12 1552 178 12 50 chr20 65985562 65985687 -682318 - AluJo SINE Alu -183 129 1 623 203 42 52 chr20 65985687 65985821 -682184 - L1M4c LINE L1 -3177 3467 3334 1847 152 40 7 chr20 65985825 65986121 -681884 - AluSx SINE Alu -6 306 1 773 177 15 0 chr20 65986126 65986256 -681749 - FLAM_C SINE Alu -1 132 1 3695 209 31 81 chr20 65986256 65986285 -681720 - L1M4 LINE L1 -4787 1859 1830 2401 78 0 0 chr20 65986285 65986581 -681424 + AluY SINE Alu 1 296 -15 3695 209 31 81 chr20 65986581 65987226 -680779 - L1M4 LINE L1 -4816 1830 1154 1998 152 0 9 chr20 65987226 65987542 -680463 - AluSq SINE Alu 0 313 1 3695 209 31 81 chr20 65987542 65987650 -680355 - L1M4 LINE L1 -5492 1154 1042 2105 115 0 7 chr20 65987650 65987955 -680050 - AluSc SINE Alu -6 303 1 1541 212 3 10 chr20 65987957 65988254 -679751 - AluJo SINE Alu -17 295 1 3695 209 31 81 chr20 65988254 65988570 -679435 - L1M4 LINE L1 -5605 1041 711 2255 119 0 0 chr20 65988570 65988882 -679123 + AluSx SINE Alu 1 312 0 3695 209 31 81 chr20 65988882 65989234 -678771 - L1M4 LINE L1 -5935 711 460 2321 90 10 0 chr20 65989234 65989535 -678470 + AluSx SINE Alu 1 304 -8 3695 209 31 81 chr20 65989535 65989660 -678345 - L1M4 LINE L1 -6186 460 330 230 301 21 0 chr20 65989913 65990006 -677999 - L1M4 LINE L1 -6443 99 5 363 215 39 23 chr20 65990010 65990140 -677865 - L1M4c LINE L1 -4279 2546 2415 2078 92 18 0 chr20 65990143 65990425 -677580 - AluSx SINE Alu -19 293 7 1315 241 85 87 chr20 65991173 65991297 -676708 - L1M4c LINE L1 -4427 2398 2275 1493 172 28 35 chr20 65991297 65991582 -676423 + AluJb SINE Alu 9 291 -21 1315 241 85 87 chr20 65991582 65991594 -676411 - L1M4c LINE L1 -4550 2275 2264 2152 116 3 0 chr20 65991594 65991895 -676110 + AluSx SINE Alu 11 312 0 838 150 0 23 chr20 65991902 65992035 -675970 + FLAM_C SINE Alu 3 132 -1 1315 241 85 87 chr20 65992035 65992174 -675831 - L1M4c LINE L1 -4567 2258 2120 1962 138 10 10 chr20 65992174 65992472 -675533 - AluSg SINE Alu -12 298 1 2466 50 0 3 chr20 65992481 65992784 -675221 - AluY SINE Alu -9 302 1 1315 241 85 87 chr20 65992784 65993313 -674692 - L1M4c LINE L1 -4713 2112 1583 1980 116 0 20 chr20 65993313 65993639 -674366 - AluSq SINE Alu 0 320 1 1315 241 85 87 chr20 65993639 65993705 -674300 - L1M4c LINE L1 -5242 1583 1518 2182 81 0 7 chr20 65993705 65993988 -674017 - AluSx SINE Alu -18 294 14 2033 108 0 36 chr20 65993998 65994327 -673678 - AluSx SINE Alu 0 312 1 1957 160 12 21 chr20 65994329 65994666 -673339 - L1MC1 LINE L1 -10 6323 5990 1315 241 85 87 chr20 65994666 65994728 -673277 - L1M4c LINE L1 -5317 1508 1302 1626 134 0 4 chr20 65994729 65994982 -673023 - AluSx SINE Alu 0 312 61 1381 136 5 0 chr20 65994985 65995191 -672814 + AluSg/x SINE Alu 97 303 -9 763 243 152 20 chr20 65995192 65995527 -672478 - L1M4b LINE L1 -5253 1694 1274 2075 120 0 13 chr20 65995527 65995836 -672169 - AluY SINE Alu -6 305 1 763 243 152 20 chr20 65995836 65995917 -672088 - L1M4b LINE L1 -5673 1274 1205 330 329 25 78 chr20 65996271 65996514 -671491 - L1M4b LINE L1 -6246 609 380 2225 113 7 0 chr20 65996520 65996830 -671175 - AluSx SINE Alu 0 312 1 452 325 76 68 chr20 65996881 65997278 -670727 - L1M4 LINE L1 -1100 5046 4647 1374 165 9 4 chr20 65997285 65997515 -670490 + AluJb SINE Alu 47 277 -35 252 0 0 0 chr20 65997521 65997549 -670456 + (CA)n Simple_repeat Simple_repeat 1 28 0 304 195 122 12 chr20 65997555 65997637 -670368 - L1ME LINE L1 -481 5640 5550 2208 82 10 0 chr20 65997991 65998282 -669723 - AluSg SINE Alu -16 294 1 441 0 0 0 chr20 65998423 65998472 -669533 + (TC)n Simple_repeat Simple_repeat 2 50 0 189 0 0 0 chr20 65998471 65998492 -669513 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 209 125 0 21 chr20 65998769 65998817 -669188 + (TG)n Simple_repeat Simple_repeat 1 47 0 316 291 5 63 chr20 65998903 65999092 -668913 + (TG)n Simple_repeat Simple_repeat 2 179 0 252 286 0 48 chr20 65999113 65999239 -668766 + (TG)n Simple_repeat Simple_repeat 2 121 0 1087 171 45 2 chr20 65999247 65999532 -668473 - MER2 DNA MER2_type 0 345 3 184 219 24 37 chr20 65999532 65999614 -668391 + (TATG)n Simple_repeat Simple_repeat 1 81 0 279 266 0 0 chr20 65999645 65999758 -668247 + (TG)n Simple_repeat Simple_repeat 1 113 0 582 270 2 3 chr20 65999772 66000392 -667613 + (TG)n Simple_repeat Simple_repeat 1 618 0 741 208 0 0 chr20 66000440 66000618 -667387 + (TG)n Simple_repeat Simple_repeat 2 179 0 207 162 0 0 chr20 66001696 66001733 -666272 + (TG)n Simple_repeat Simple_repeat 1 37 0 28 0 0 0 chr20 66005571 66005599 -662406 + GC_rich Low_complexity Low_complexity 1 28 0 26 30 0 0 chr20 66007005 66007038 -660967 + GC_rich Low_complexity Low_complexity 1 33 0 34 72 0 0 chr20 66007109 66007178 -660827 + GC_rich Low_complexity Low_complexity 1 69 0 417 109 0 0 chr20 66007212 66007276 -660729 + (CGGGG)n Simple_repeat Simple_repeat 2 65 0 29 0 0 0 chr20 66007282 66007311 -660694 + GC_rich Low_complexity Low_complexity 1 29 0 182 37 37 0 chr20 66007329 66007356 -660649 + (CCCGG)n Simple_repeat Simple_repeat 1 28 0 39 98 0 0 chr20 66007394 66007517 -660488 + GC_rich Low_complexity Low_complexity 1 123 0 53 90 0 0 chr20 66007616 66007760 -660245 + GC_rich Low_complexity Low_complexity 1 144 0 23 0 0 0 chr20 66007975 66007998 -660007 + GC_rich Low_complexity Low_complexity 1 23 0 211 193 0 53 chr20 66010005 66010062 -657943 + C-rich Low_complexity Low_complexity 2 55 0 333 282 6 39 chr20 66014808 66015054 -652951 + (CGGGG)n Simple_repeat Simple_repeat 1 237 0 2416 77 0 0 chr20 66016826 66017137 -650868 - AluY SINE Alu 0 311 1 1644 138 55 35 chr20 66017750 66018040 -649965 - AluJo SINE Alu -16 296 1 1937 153 10 0 chr20 66018124 66018425 -649580 + AluJb SINE Alu 1 304 -8 927 109 0 29 chr20 66021961 66022098 -645907 - FLAM_C SINE Alu 0 133 1 2463 48 0 0 chr20 66022107 66022400 -645605 - AluY SINE Alu -18 293 1 22 35 0 0 chr20 66022456 66022485 -645520 + AT_rich Low_complexity Low_complexity 1 29 0 811 268 100 34 chr20 66022731 66023112 -644893 - MLT1C LTR MaLR -18 449 44 402 343 209 3 chr20 66024087 66024393 -643612 - L1ME3 LINE L1 -29 6202 5834 367 274 46 46 chr20 66024394 66024569 -643436 - L1ME3 LINE L1 -430 5809 5635 2130 93 4 0 chr20 66024646 66024924 -643081 - AluSx SINE Alu -33 279 1 254 228 13 38 chr20 66024928 66025007 -642998 - L1ME3 LINE L1 -1194 5021 4945 320 339 35 0 chr20 66025045 66025160 -642845 - L1ME3 LINE L1 -1353 4862 4744 647 234 62 5 chr20 66025161 66025353 -642652 + MER74A LTR ERVL 1 203 -355 281 204 31 99 chr20 66025478 66025669 -642336 + (CCCA)n Simple_repeat Simple_repeat 2 179 0 1202 225 52 6 chr20 66025702 66026066 -641939 + MER74A LTR ERVL 156 536 -22 829 237 95 72 chr20 66026091 66026234 -641771 - L1ME3 LINE L1 -1468 4747 4609 2321 54 10 7 chr20 66026234 66026532 -641473 - AluY SINE Alu -11 300 2 829 237 95 72 chr20 66026532 66026890 -641115 - L1ME3 LINE L1 -1606 4609 4231 909 140 0 22 chr20 66026890 66027026 -640979 - FLAM_C SINE Alu 0 133 1 829 237 95 72 chr20 66027026 66027051 -640954 - L1ME3 LINE L1 -1984 4231 4208 1305 335 55 5 chr20 66027167 66027919 -640086 - L1ME3 LINE L1 -2013 4202 3414 2258 69 31 3 chr20 66027967 66028258 -639747 - AluY SINE Alu -12 299 1 781 184 0 54 chr20 66028327 66028474 -639531 - AluJo SINE Alu -49 263 125 1071 211 51 156 chr20 66028475 66028499 -639506 - L1ME3 LINE L1 -2978 3237 3212 2142 125 0 0 chr20 66028499 66028796 -639209 - AluSx SINE Alu -11 301 5 1071 211 51 156 chr20 66028796 66029003 -639002 - L1ME3 LINE L1 -3003 3212 2985 2225 98 0 0 chr20 66029003 66029299 -638706 + AluSg SINE Alu 1 296 -14 1071 211 51 156 chr20 66029299 66029874 -638131 - L1ME3 LINE L1 -3230 2985 2546 2012 89 14 11 chr20 66029874 66030186 -637819 + AluSg SINE Alu 2 314 0 1071 211 51 156 chr20 66030186 66030350 -637655 - L1ME3 LINE L1 -3669 2546 2366 1698 195 7 0 chr20 66030353 66030661 -637344 - AluJo SINE Alu -2 310 1 259 224 96 39 chr20 66030688 66030820 -637185 - L1ME3 LINE L1 -4119 2277 2133 2257 160 91 5 chr20 66030820 66031214 -636791 - MSTA LTR MaLR 0 428 1 259 224 96 39 chr20 66031214 66031237 -636768 - L1ME3 LINE L1 -4263 2133 2113 1046 181 0 16 chr20 66031457 66031639 -636366 - AluJb SINE Alu -2 310 132 2115 108 7 3 chr20 66031656 66031951 -636054 + AluSx SINE Alu 1 296 -16 368 286 94 12 chr20 66031951 66032096 -635909 - L1ME3 LINE L1 -4765 1631 1466 2296 82 13 0 chr20 66032096 66032400 -635605 - AluSp SINE Alu -5 308 1 368 286 94 12 chr20 66032400 66032418 -635587 - L1ME3 LINE L1 -4930 1466 1451 837 90 0 0 chr20 66032418 66032529 -635476 - AluSg/x SINE Alu -10 302 192 600 148 0 0 chr20 66032529 66032637 -635368 + (TG)n Simple_repeat Simple_repeat 1 108 0 225 269 43 11 chr20 66032659 66032752 -635253 - L1ME3 LINE L1 -5674 531 436 1777 160 3 3 chr20 66032934 66033227 -634778 - AluJo SINE Alu -15 297 5 2399 90 0 0 chr20 66033707 66034017 -633988 - AluSq SINE Alu -3 310 1 2161 82 0 52 chr20 66035820 66036126 -631879 + AluSx SINE Alu 11 300 -12 2073 108 20 3 chr20 66039500 66039797 -628208 - AluSq SINE Alu -11 302 1 1977 129 0 0 chr20 66039938 66040224 -627781 + AluSx SINE Alu 1 286 -26 405 0 0 0 chr20 66040224 66040269 -627736 + (CA)n Simple_repeat Simple_repeat 2 46 0 1307 135 39 14 chr20 66040732 66040939 -627066 - AluJb SINE Alu -14 298 87 183 42 0 0 chr20 66041550 66041574 -626431 + (C)n Simple_repeat Simple_repeat 1 24 0 2575 45 0 0 chr20 66042193 66042504 -625501 - AluY SINE Alu 0 311 1 715 191 285 32 chr20 66043848 66044024 -623981 + L1P4 LINE L1 4989 5119 -1055 2349 81 0 0 chr20 66044024 66044320 -623685 + AluSx SINE Alu 2 297 -15 715 191 285 32 chr20 66044320 66044522 -623483 + L1P4 LINE L1 5119 5457 -717 1963 225 47 83 chr20 66044659 66044689 -623316 + L1MB7 LINE L1 5451 5481 -703 1540 184 30 20 chr20 66044689 66044988 -623017 + AluJo SINE Alu 1 302 -10 1963 225 47 83 chr20 66044988 66045717 -622288 + L1MB7 LINE L1 5481 6183 -1 810 254 104 51 chr20 66046339 66046694 -621311 - MLT1A2 LTR MaLR 0 374 1 29 0 0 0 chr20 66046714 66046743 -621262 + AT_rich Low_complexity Low_complexity 1 29 0 2272 85 0 20 chr20 66046743 66046909 -621096 - AluSp SINE Alu -14 299 140 2510 54 0 10 chr20 66046909 66047223 -620782 - AluY SINE Alu 0 311 1 2272 85 0 20 chr20 66047223 66047361 -620644 - AluSp SINE Alu -173 140 1 2045 134 10 3 chr20 66047493 66047800 -620205 + AluSq SINE Alu 2 310 -3 455 300 32 0 chr20 66047831 66048021 -619984 + L1M4 LINE L1 4872 5067 -1079 2382 62 0 0 chr20 66048022 66048312 -619693 + AluY SINE Alu 1 290 -21 488 251 111 19 chr20 66048317 66048350 -619655 + L1M4 LINE L1 5169 5198 -984 2180 106 0 37 chr20 66048350 66048672 -619333 + AluSg SINE Alu 1 310 0 488 251 111 19 chr20 66048672 66048853 -619152 + L1M4 LINE L1 5198 5406 -776 270 215 252 9 chr20 66048899 66049006 -618999 + L1ME LINE L1 5304 5436 -728 1984 120 7 3 chr20 66049010 66049301 -618704 + AluSx SINE Alu 1 292 -20 2370 72 0 7 chr20 66049305 66049609 -618396 + AluY SINE Alu 1 302 -9 566 234 258 21 chr20 66049668 66050056 -617949 + MLT1D LTR MaLR 16 495 -10 1754 124 9 87 chr20 66050324 66050646 -617359 + AluJb SINE Alu 1 297 -15 2326 86 0 3 chr20 66050649 66050952 -617053 + AluSc SINE Alu 1 302 -7 2347 73 20 0 chr20 66052453 66052756 -615249 + AluSc SINE Alu 1 309 0 2129 96 13 10 chr20 66052780 66053082 -614923 + AluSq SINE Alu 1 303 -10 537 200 29 36 chr20 66053824 66053964 -614041 + MER20 DNA MER1_type 49 187 -32 2171 80 0 23 chr20 66053986 66054311 -613694 - AluSc SINE Alu 0 309 1 630 185 44 52 chr20 66054312 66054447 -613558 - AluJb SINE Alu -172 140 7 555 203 187 5 chr20 66054546 66054653 -613352 + L1MB4 LINE L1 5960 6046 -134 1961 211 110 68 chr20 66054653 66055227 -612778 + MER7C DNA MER2_type 4 601 -1 555 203 187 5 chr20 66055227 66055306 -612699 + L1MB4 LINE L1 6046 6180 0 901 178 6 12 chr20 66055611 66055780 -612225 - AluJb SINE Alu -9 303 136 2161 104 3 22 chr20 66056058 66056334 -611671 + AluSx SINE Alu 1 272 -40 2181 56 70 3 chr20 66056334 66056618 -611387 - AluSp SINE Alu -10 303 1 2161 104 3 22 chr20 66056618 66056657 -611348 + AluSx SINE Alu 272 310 -2 2351 72 0 3 chr20 66058715 66059021 -608984 + AluY SINE Alu 1 305 -6 1021 223 60 19 chr20 66059371 66059745 -608260 - MLT1C LTR MaLR 0 390 2 2212 89 3 7 chr20 66060015 66060319 -607686 - AluSx SINE Alu -9 303 1 28 29 0 0 chr20 66061346 66061381 -606624 + AT_rich Low_complexity Low_complexity 1 35 0 2472 47 0 13 chr20 66061406 66061707 -606298 + AluY SINE Alu 1 297 -14 1551 155 0 4 chr20 66061745 66061990 -606015 - AluJo SINE Alu -64 248 5 2227 84 3 0 chr20 66064045 66064330 -603675 + AluSq SINE Alu 1 322 0 276 0 0 28 chr20 66064330 66064366 -603639 + (TAAAA)n Simple_repeat Simple_repeat 2 70 0 1787 116 0 92 chr20 66064389 66064507 -603498 + AluJb SINE Alu 1 128 -184 7364 48 12 0 chr20 66064507 66065852 -602153 - L1PA5 LINE L1 0 6154 4800 1787 116 0 92 chr20 66065852 66065894 -602111 + AluJb SINE Alu 128 172 -140 2398 83 0 0 chr20 66065894 66066195 -601810 + AluSx SINE Alu 1 301 -11 1787 116 0 92 chr20 66066195 66066361 -601644 + AluJb SINE Alu 172 298 -14 1789 153 0 30 chr20 66066541 66066841 -601164 - AluJb SINE Alu -21 291 1 1999 125 7 3 chr20 66066854 66067142 -600863 - AluSx SINE Alu -16 296 8 689 282 139 27 chr20 66067171 66067575 -600430 + L1ME2 LINE L1 5322 5770 -396 323 263 120 28 chr20 66067695 66067881 -600124 + L1ME2 LINE L1 5833 6039 -123 5479 120 88 19 chr20 66067881 66069323 -598682 + pTR5 LTR ERV1 743 2438 0 283 271 0 0 chr20 66069373 66069443 -598562 + L1MA10 LINE L1 6252 6321 -13 793 190 24 52 chr20 66069512 66069642 -598363 + MLT1C LTR MaLR 1 124 -343 2090 116 10 0 chr20 66069642 66069934 -598071 + AluSx SINE Alu 1 295 -17 793 190 24 52 chr20 66069934 66070014 -597991 + MLT1C LTR MaLR 124 205 -262 373 294 11 1 chr20 66070370 66070493 -597512 + MLT1B LTR MaLR 239 378 -12 1628 171 31 0 chr20 66071209 66071495 -596510 - AluJb SINE Alu -12 300 6 2238 89 0 0 chr20 66072113 66072415 -595590 + AluSg SINE Alu 1 302 -8 2319 85 0 0 chr20 66072425 66072720 -595285 - AluSc SINE Alu -14 295 1 796 202 6 36 chr20 66072816 66072984 -595021 + FRAM SINE Alu 1 163 -3 453 286 100 8 chr20 66072993 66073234 -594771 + MLT1C LTR MaLR 205 467 0 2184 80 0 58 chr20 66073251 66073576 -594429 - AluSx SINE Alu -6 306 1 21 0 0 0 chr20 66073581 66073602 -594403 + AT_rich Low_complexity Low_complexity 1 21 0 2221 107 0 16 chr20 66073621 66073938 -594067 + AluSq SINE Alu 1 312 -1 1103 140 0 0 chr20 66074113 66074277 -593728 - AluSg/x SINE Alu -15 297 134 2426 69 0 0 chr20 66074277 66074583 -593422 - AluY SINE Alu -5 306 1 359 161 32 200 chr20 66074583 66074738 -593267 - L1 LINE L1 -2562 3584 3456 329 305 73 57 chr20 66074721 66074845 -593160 - L1M4 LINE L1 -2565 3581 3452 * 2043 126 0 10 chr20 66074845 66075146 -592859 - AluSx SINE Alu -14 298 1 329 305 73 57 chr20 66075146 66075198 -592807 - L1M4 LINE L1 -2694 3452 3402 2405 48 3 13 chr20 66076197 66076507 -591498 + AluY SINE Alu 4 310 -1 1727 163 3 3 chr20 66077191 66077486 -590519 + AluJb SINE Alu 11 305 -7 232 328 92 0 chr20 66077618 66077749 -590256 + L1ME LINE L1 5614 5756 -365 1900 149 0 0 chr20 66077988 66078276 -589729 + AluSx SINE Alu 24 311 -1 1369 151 128 11 chr20 66079729 66079994 -588011 + AluSc SINE Alu 1 296 -3 1772 135 3 14 chr20 66079996 66080310 -587695 + AluSg SINE Alu 1 311 0 2036 125 7 13 chr20 66080315 66080619 -587386 + AluSc SINE Alu 1 302 -7 2379 90 3 0 chr20 66080668 66080978 -587027 + AluSx SINE Alu 1 311 -1 345 373 123 15 chr20 66081090 66081358 -586647 + L1MC5 LINE L1 7360 7656 -305 2433 74 3 0 chr20 66081454 66081763 -586242 + AluY SINE Alu 1 310 -1 26 64 0 0 chr20 66081891 66081938 -586067 + AT_rich Low_complexity Low_complexity 1 47 0 226 377 68 0 chr20 66082184 66082404 -585601 + Charlie4a DNA MER1_type 186 420 -88 1026 187 0 0 chr20 66082404 66082586 -585419 + AluJb SINE Alu 118 299 -13 233 212 48 41 chr20 66082671 66082817 -585188 + (CGGTG)n Simple_repeat Simple_repeat 3 149 0 * 254 147 42 100 chr20 66082716 66082906 -585099 + (CAGTG)n Simple_repeat Simple_repeat 1 179 0 229 190 50 56 chr20 66083317 66083496 -584509 + (CAGTG)n Simple_repeat Simple_repeat 1 178 0 311 122 67 67 chr20 66083537 66083701 -584304 + (CGGTG)n Simple_repeat Simple_repeat 1 164 0 1023 246 91 48 chr20 66084159 66084324 -583681 + MLT1C LTR MaLR 1 157 -310 2355 83 3 3 chr20 66084324 66084637 -583368 + AluSp SINE Alu 1 313 0 1731 163 51 0 chr20 66084639 66084934 -583071 + AluJo SINE Alu 1 310 -2 2212 121 0 3 chr20 66084934 66085247 -582758 + AluSx SINE Alu 1 312 0 1023 246 91 48 chr20 66085247 66085516 -582489 + MLT1C LTR MaLR 156 458 -9 2071 94 0 56 chr20 66086075 66086394 -581611 + AluSg SINE Alu 1 301 -9 2209 86 3 3 chr20 66086394 66086685 -581320 + AluSg SINE Alu 1 291 -19 2337 73 0 20 chr20 66087599 66087900 -580105 - AluY SINE Alu -16 295 1 2147 76 17 0 chr20 66087945 66088233 -579772 - AluSp SINE Alu -20 293 1 1581 173 24 10 chr20 66088235 66088397 -579608 - AluSg SINE Alu -17 293 124 2217 76 28 0 chr20 66088397 66088686 -579319 - AluSq SINE Alu -16 297 1 1581 173 24 10 chr20 66088686 66088812 -579193 - AluSg SINE Alu -186 124 1 753 155 16 16 chr20 66088813 66088942 -579063 - FLAM_A SINE Alu 0 142 14 2168 108 0 26 chr20 66088942 66089249 -578756 - AluSq SINE Alu -14 299 1 858 135 0 0 chr20 66090233 66090359 -577646 + AluJ SINE Alu 1 126 -186 1926 138 0 22 chr20 66090380 66090699 -577306 + AluSx SINE Alu 1 312 0 1743 164 9 31 chr20 66090710 66091028 -576977 + AluSx SINE Alu 1 311 -1 1088 143 18 0 chr20 66091040 66091208 -576797 + AluJ SINE Alu 121 291 -21 279 0 0 0 chr20 66091360 66091391 -576614 + (TG)n Simple_repeat Simple_repeat 2 32 0 2281 97 0 0 chr20 66092620 66092919 -575086 + AluSx SINE Alu 1 299 -13 2228 78 0 10 chr20 66093942 66094237 -573768 + AluY SINE Alu 1 292 -19 190 255 39 0 chr20 66094696 66094747 -573258 + L2 LINE L2 3199 3251 -21 2807 6 0 3 chr20 66094827 66095142 -572863 + AluYb8 SINE Alu 1 314 -4 984 189 0 0 chr20 66095411 66095586 -572419 - FRAM SINE Alu -1 175 1 233 153 56 14 chr20 66097872 66097944 -570061 + (CCCCG)n Simple_repeat Simple_repeat 1 75 0 29 0 0 0 chr20 66098119 66098148 -569857 + GC_rich Low_complexity Low_complexity 1 29 0 39 92 0 18 chr20 66098378 66098541 -569464 + GC_rich Low_complexity Low_complexity 1 160 0 26 64 0 0 chr20 66098627 66098674 -569331 + GC_rich Low_complexity Low_complexity 1 47 0 2524 50 0 0 chr20 66100356 66100657 -567348 + AluY SINE Alu 1 301 -10 411 72 33 88 chr20 66102937 66103381 -564624 + (CAGGG)n Simple_repeat Simple_repeat 1 419 0 346 82 49 76 chr20 66103416 66103600 -564405 + (CAGGG)n Simple_repeat Simple_repeat 2 180 0 1152 254 66 45 chr20 66104956 66105382 -562623 + L1MD3 LINE L1 6941 7356 -639 2103 116 0 28 chr20 66105382 66105700 -562305 - AluSx SINE Alu -1 311 3 1152 254 66 45 chr20 66105700 66105898 -562107 + L1MD3 LINE L1 7356 7816 -179 2021 94 0 0 chr20 66106029 66106294 -561711 - AluSg SINE Alu -45 265 1 912 108 8 0 chr20 66106294 66106424 -561581 - AluSq/x SINE Alu -177 135 5 2188 88 10 3 chr20 66107079 66107375 -560630 + AluY SINE Alu 1 298 -13 1984 101 25 11 chr20 66108006 66108314 -559691 - AluSq SINE Alu 0 314 3 2265 111 0 0 chr20 66108318 66108624 -559381 - AluSc SINE Alu -3 306 1 2370 74 0 0 chr20 66108629 66108948 -559057 - AluY SINE Alu 0 319 1 2129 122 0 0 chr20 66108950 66109238 -558767 - AluSx SINE Alu -24 288 1 1652 137 69 0 chr20 66110029 66110291 -557714 + AluJb SINE Alu 19 298 -14 644 319 96 22 chr20 66112035 66112524 -555481 + L1ME3A LINE L1 5630 6154 -16 2308 60 3 7 chr20 66112576 66112874 -555131 + AluY SINE Alu 1 297 -14 2323 83 3 0 chr20 66112886 66113186 -554819 + AluSg SINE Alu 1 301 -9 680 157 0 21 chr20 66114011 66114383 -553622 + (CA)n Simple_repeat Simple_repeat 1 364 0 2213 81 7 16 chr20 66115884 66116193 -551812 + AluSx SINE Alu 1 306 -6 2518 55 0 0 chr20 66116454 66116764 -551241 + AluY SINE Alu 2 311 0 235 306 31 10 chr20 66116783 66116881 -551124 - L1ME1 LINE L1 -4 6162 6063 258 336 7 7 chr20 66116994 66117010 -550995 - L1MC2 LINE L1 -352 5992 5977 592 288 150 0 chr20 66117010 66117323 -550682 - L1ME1 LINE L1 -196 5978 5619 2539 36 0 0 chr20 66117344 66117646 -550359 - AluY SINE Alu -9 302 1 230 392 63 0 chr20 66117649 66117792 -550213 + L2 LINE L2 3162 3313 0 2263 78 0 13 chr20 66118695 66118829 -549176 + AluSc SINE Alu 1 135 -174 2296 107 0 0 chr20 66118829 66119137 -548868 + AluSg SINE Alu 1 308 -2 2263 78 0 13 chr20 66119137 66119308 -548697 + AluSc SINE Alu 135 302 -7 1429 197 75 4 chr20 66119582 66119861 -548144 + AluSx SINE Alu 1 299 -3 1094 132 4 3 chr20 66119864 66120106 -547899 + AluSx SINE Alu 1 309 -3 2228 100 0 0 chr20 66120115 66120426 -547579 + AluSx SINE Alu 1 311 -1 202 218 18 18 chr20 66121264 66121319 -546686 + (CTGGGG)n Simple_repeat Simple_repeat 4 58 0 214 261 0 0 chr20 66121906 66121952 -546053 + CT-rich Low_complexity Low_complexity 1 46 0 195 42 0 0 chr20 66122523 66122547 -545458 + (TCCCC)n Simple_repeat Simple_repeat 3 26 0 2509 58 0 0 chr20 66123632 66123942 -544063 + AluY SINE Alu 1 310 -1 657 202 0 0 chr20 66124596 66124710 -543295 - FRAM SINE Alu -62 114 1 641 134 74 144 chr20 66126793 66126845 -541160 + MER53 DNA DNA 1 55 -134 2128 105 0 10 chr20 66126845 66127161 -540844 + AluSq SINE Alu 1 313 0 641 134 74 144 chr20 66127161 66127310 -540695 + MER53 DNA DNA 55 188 -1 251 174 0 0 chr20 66128108 66128154 -539851 + Alu SINE Alu 1 46 -254 825 142 0 30 chr20 66128158 66128292 -539713 + FLAM_C SINE Alu 1 130 -3 39 22 0 0 chr20 66130075 66130121 -537884 + GC_rich Low_complexity Low_complexity 1 46 0 181 358 67 8 chr20 66130369 66130503 -537502 - L2 LINE L2 -174 3098 2957 346 254 92 31 chr20 66131200 66131330 -536675 + MIR SINE MIR 9 146 -116 2189 97 0 10 chr20 66131527 66131838 -536167 + AluSq SINE Alu 6 313 0 2423 78 0 0 chr20 66133139 66133448 -534557 - AluSc SINE Alu 0 309 1 2284 81 7 3 chr20 66133496 66133804 -534201 - AluY SINE Alu -2 309 1 1074 118 5 59 chr20 66133804 66133991 -534014 - AluJo SINE Alu -1 311 134 2191 101 3 3 chr20 66133991 66134299 -533706 - AluSp SINE Alu -5 308 1 1074 118 5 59 chr20 66134299 66134314 -533691 - AluJo SINE Alu -178 134 120 2095 124 3 0 chr20 66134329 66134628 -533377 + AluSx SINE Alu 1 300 -12 246 105 0 0 chr20 66134810 66134848 -533157 + (T)n Simple_repeat Simple_repeat 1 38 0 949 60 0 0 chr20 66134866 66134983 -533022 - AluSq/x SINE Alu -195 117 1 1552 86 9 5 chr20 66135047 66135257 -532748 - AluSx SINE Alu -100 212 2 2034 99 18 0 chr20 66135711 66135994 -532011 + AluSx SINE Alu 5 292 -20 1748 157 20 27 chr20 66136888 66137188 -530817 + AluJb SINE Alu 1 298 -14 1484 61 20 5 chr20 66137566 66137764 -530241 - AluY SINE Alu -5 306 106 2213 108 0 0 chr20 66137764 66138061 -529944 - AluSg SINE Alu -13 297 1 2002 156 0 0 chr20 66138086 66138388 -529617 - AluSx SINE Alu -10 302 1 2079 94 0 4 chr20 66138399 66138675 -529330 - AluSx SINE Alu -17 295 21 2152 102 10 0 chr20 66138684 66138979 -529026 - AluSq SINE Alu -15 298 1 195 42 0 0 chr20 66139085 66139109 -528896 + (T)n Simple_repeat Simple_repeat 1 24 0 2200 115 7 0 chr20 66139419 66139723 -528282 - AluSx SINE Alu -6 306 1 2242 84 0 34 chr20 66139736 66140058 -527947 - AluY SINE Alu 0 311 1 2277 94 10 0 chr20 66140253 66140562 -527443 + AluSp SINE Alu 1 312 -1 1970 107 0 7 chr20 66141086 66141274 -526731 - AluSg SINE Alu -1 309 122 261 0 0 0 chr20 66141274 66141303 -526702 + (TG)n Simple_repeat Simple_repeat 2 30 0 1970 107 0 7 chr20 66141303 66141395 -526610 - AluSg SINE Alu -188 122 31 1834 177 6 3 chr20 66141409 66141720 -526285 - AluJo SINE Alu 0 312 1 2089 115 0 7 chr20 66141903 66142198 -525807 + AluSx SINE Alu 1 293 -19 210 37 0 0 chr20 66142198 66142225 -525780 + (TA)n Simple_repeat Simple_repeat 2 28 0 2311 87 0 0 chr20 66144061 66144370 -523635 - AluY SINE Alu -2 309 1 1070 75 0 0 chr20 66144370 66144504 -523501 - AluY SINE Alu -177 134 1 226 200 0 18 chr20 66145495 66145550 -522455 - MLT1K LTR MaLR -17 571 518 304 220 77 0 chr20 66145624 66145715 -522290 - MLT1K LTR MaLR -373 215 118 194 303 91 10 chr20 66145956 66146055 -521950 + MIR SINE MIR 119 225 -37 2340 76 0 3 chr20 66147654 66147955 -520050 + AluY SINE Alu 1 300 -11 2114 113 7 0 chr20 66148125 66148427 -519578 + AluSx SINE Alu 1 304 -8 182 271 129 0 chr20 66150463 66150533 -517472 + MIR SINE MIR 5 83 -179 345 24 0 0 chr20 66150863 66150905 -517100 + (CCTG)n Simple_repeat Simple_repeat 2 43 0 2313 25 42 3 chr20 66153411 66153694 -514311 - AluY SINE Alu -17 294 1 2215 85 17 0 chr20 66153694 66153988 -514017 - AluSc SINE Alu -10 299 1 1133 258 33 58 chr20 66156364 66156791 -511214 - L1MD1 LINE L1 -30 6212 5797 217 299 60 88 chr20 66158628 66158879 -509126 - L2 LINE L2 -71 3201 2958 568 200 38 0 chr20 66158921 66159026 -508979 + FLAM_A SINE Alu 16 124 -18 1882 179 0 3 chr20 66159031 66159344 -508661 + AluJb SINE Alu 1 312 0 197 331 77 39 chr20 66159643 66159773 -508232 - L2 LINE L2 -1 3271 3137 268 281 177 0 chr20 66159882 66159978 -508027 + MIR SINE MIR 119 231 -31 2229 108 0 3 chr20 66160022 66160327 -507678 - AluSx SINE Alu -6 306 3 1400 142 61 64 chr20 66160470 66160766 -507239 - AluJb SINE Alu -5 307 13 306 289 37 45 chr20 66160770 66160974 -507031 - L1MD1 LINE L1 -371 5799 5595 288 176 0 0 chr20 66162193 66162261 -505744 + (CCG)n Simple_repeat Simple_repeat 2 69 0 273 155 43 26 chr20 66162336 66162452 -505553 + (CGGG)n Simple_repeat Simple_repeat 3 120 0 31 92 0 0 chr20 66162475 66162562 -505443 + GC_rich Low_complexity Low_complexity 1 87 0 189 0 0 0 chr20 66162587 66162608 -505397 + (CCGGG)n Simple_repeat Simple_repeat 5 25 0 239 282 39 29 chr20 66163577 66163680 -504325 + L2 LINE L2 2857 2960 -354 266 211 0 0 chr20 66163843 66163895 -504110 + L2 LINE L2 3220 3271 -1 2308 87 3 0 chr20 66164162 66164462 -503543 + AluSq SINE Alu 5 305 -8 1190 153 0 35 chr20 66164407 66164636 -503369 + AluSg/x SINE Alu 85 305 -7 230 329 66 0 chr20 66165099 66165175 -502830 - MIR SINE MIR -109 99 19 2181 90 3 3 chr20 66165607 66165906 -502099 + AluSc SINE Alu 1 299 -10 2178 110 0 0 chr20 66166623 66166924 -501081 - AluY SINE Alu -8 303 3 2103 136 0 0 chr20 66166926 66167234 -500771 - AluSx SINE Alu -4 308 1 243 154 0 0 chr20 66167234 66167273 -500732 - Alu SINE Alu -209 93 55 1861 152 7 3 chr20 66167346 66167649 -500356 + AluJb SINE Alu 6 309 -3 2064 130 0 0 chr20 66168014 66168306 -499699 - AluSx SINE Alu -16 296 5 2341 54 0 20 chr20 66169101 66169399 -498606 - AluY SINE Alu -19 292 1 2338 84 3 10 chr20 66169402 66169713 -498292 - AluSp SINE Alu -4 309 1 2397 69 0 7 chr20 66169716 66170022 -497983 - AluY SINE Alu -7 304 1 1122 202 65 16 chr20 66170030 66170277 -497728 - AluJo SINE Alu -22 290 32 2090 98 14 3 chr20 66170366 66170652 -497353 - AluSc SINE Alu -20 289 1 21 0 0 0 chr20 66170685 66170706 -497299 + AT_rich Low_complexity Low_complexity 1 21 0 747 211 0 0 chr20 66170713 66170846 -497159 + AluJo/FLAM SINE Alu 1 133 -169 1298 167 0 46 chr20 66170849 66171089 -496916 + AluJb SINE Alu 1 229 -83 2282 84 3 3 chr20 66171840 66172149 -495856 - AluSq SINE Alu -4 309 1 2106 135 0 3 chr20 66172148 66172459 -495546 - AluSx SINE Alu 0 312 3 * 529 196 75 0 chr20 66172466 66172573 -495432 - AluJb SINE Alu -16 296 182 1123 102 32 43 chr20 66172614 66172782 -495223 - AluSp SINE Alu -11 302 135 2288 78 14 3 chr20 66172782 66173077 -494928 - AluSx SINE Alu -14 298 1 1123 102 32 43 chr20 66173077 66173095 -494910 - AluSp SINE Alu -178 135 118 1923 133 14 14 chr20 66173250 66173543 -494462 + AluSq SINE Alu 1 293 -20 2259 62 7 14 chr20 66173548 66173839 -494166 + AluY SINE Alu 1 289 -22 21 0 0 0 chr20 66173839 66173860 -494145 + AT_rich Low_complexity Low_complexity 1 21 0 1335 193 60 4 chr20 66173869 66174158 -493847 + AluJo SINE Alu 3 306 0 297 386 21 14 chr20 66174275 66174415 -493590 + MIR SINE MIR 17 157 -105 269 262 182 37 chr20 66174412 66174599 -493406 - MIR SINE MIR -1 261 48 * 2063 98 3 7 chr20 66174815 66175111 -492894 - AluSg SINE Alu -15 295 1 836 190 51 19 chr20 66175704 66175862 -492143 + FRAM SINE Alu 1 163 -3 986 95 0 22 chr20 66175862 66175999 -492006 + AluSq/x SINE Alu 1 134 -179 1286 74 0 6 chr20 66176000 66176163 -491842 + U1 snRNA snRNA 1 162 -3 1917 100 89 0 chr20 66176193 66176301 -491704 + AluSx SINE Alu 1 98 -214 2034 58 4 18 chr20 66176301 66176578 -491427 + AluY SINE Alu 39 311 0 1917 100 89 0 chr20 66176578 66176750 -491255 + AluSx SINE Alu 98 306 -6 2281 72 3 0 chr20 66177308 66177599 -490406 + AluY SINE Alu 1 292 -19 2214 94 7 0 chr20 66177717 66178014 -489991 - AluSg SINE Alu -11 299 1 1749 179 7 20 chr20 66178722 66179023 -488982 - AluJb SINE Alu -15 297 1 1975 160 0 0 chr20 66179066 66179372 -488633 + AluSx SINE Alu 1 306 -6 2094 85 3 29 chr20 66179645 66179951 -488054 - AluSc SINE Alu -11 298 1 1196 146 0 0 chr20 66180431 66180609 -487396 - AluSg/x SINE Alu -1 311 134 2013 114 16 22 chr20 66180609 66180924 -487081 - AluSq SINE Alu 0 313 1 2162 94 0 10 chr20 66181364 66181662 -486343 - AluY SINE Alu -16 295 1 2138 110 0 7 chr20 66181662 66181961 -486044 - AluSx SINE Alu -15 297 1 236 200 0 0 chr20 66182418 66182473 -485532 + L1MB2 LINE L1 6117 6171 0 334 362 35 0 chr20 66182475 66182591 -485414 + L1ME3A LINE L1 5152 5271 -875 371 226 119 19 chr20 66182834 66182993 -485012 - MER5C DNA MER1_type -1 323 149 1886 134 0 47 chr20 66182993 66183291 -484714 - AluSx SINE Alu -26 286 3 4241 64 54 1 chr20 66183292 66184274 -483731 - MER11A LTR ERVK 0 1266 1 1707 184 10 0 chr20 66184304 66184598 -483407 - AluSx SINE Alu -15 297 1 2018 108 0 4 chr20 66184598 66184877 -483128 - AluSx SINE Alu -9 303 26 421 320 39 23 chr20 66185088 66185281 -482724 + L1ME3A LINE L1 5690 5889 -281 747 172 16 8 chr20 66185281 66185409 -482596 + FLAM_A SINE Alu 1 129 -4 421 320 39 23 chr20 66185409 66185474 -482531 + L1ME3A LINE L1 5889 5952 -218 2321 61 7 3 chr20 66185642 66185939 -482066 - AluY SINE Alu -13 298 1 308 303 15 76 chr20 66186257 66186389 -481616 + L2 LINE L2 3146 3269 -3 1801 122 4 11 chr20 66187711 66187989 -480016 - AluSx SINE Alu 0 312 37 2005 121 4 0 chr20 66187994 66188304 -479701 - AluSp SINE Alu 0 311 1 2366 67 0 0 chr20 66188355 66188653 -479352 + AluY SINE Alu 1 298 -13 2026 140 0 0 chr20 66188831 66189124 -478881 - AluSx SINE Alu -19 293 1 2033 99 3 20 chr20 66189235 66189528 -478477 + AluSx SINE Alu 11 298 -14 1503 167 17 31 chr20 66189550 66189838 -478167 + AluJb SINE Alu 22 305 -7 229 241 0 0 chr20 66189844 66189902 -478103 - L1MEc LINE L1 -4585 1811 1754 2227 114 0 3 chr20 66189903 66190209 -477796 + AluSx SINE Alu 1 305 -7 1541 186 51 0 chr20 66190224 66190499 -477506 + AluJo SINE Alu 6 294 -18 1315 209 55 0 chr20 66190502 66190756 -477249 + AluJo SINE Alu 1 268 -44 362 276 49 32 chr20 66190924 66191047 -476958 - L1MDa LINE L1 -818 5722 5598 784 242 59 26 chr20 66191050 66191389 -476616 - L1MDa LINE L1 -1307 5233 4884 897 222 6 0 chr20 66191425 66191601 -476404 - FRAM SINE Alu -5 171 1 1505 130 61 36 chr20 66191619 66191841 -476164 + AluSx SINE Alu 3 235 -77 2712 183 68 47 chr20 66191841 66192249 -475756 - LTR27 LTR ERV1 -3 633 206 2087 113 3 3 chr20 66192249 66192540 -475465 + AluSg SINE Alu 1 291 -19 2712 183 68 47 chr20 66192540 66192750 -475255 - LTR27 LTR ERV1 -430 206 2 1505 130 61 36 chr20 66192750 66192804 -475201 + AluSx SINE Alu 235 286 -26 648 237 142 0 chr20 66192810 66192861 -475144 - L1MDa LINE L1 -2565 3975 3933 2374 74 0 3 chr20 66192861 66193173 -474832 - AluY SINE Alu 0 311 1 648 237 142 0 chr20 66193173 66193374 -474631 - L1MDa LINE L1 -2607 3933 3687 509 229 160 14 chr20 66193379 66193523 -474482 - L1MDa LINE L1 -2934 3606 3442 491 287 58 37 chr20 66193530 66193951 -474054 - MLT2B1 LTR ERVL 0 520 3 414 300 143 7 chr20 66193958 66194231 -473774 - L1MDa LINE L1 -3193 3347 3038 433 245 75 41 chr20 66194263 66194281 -473724 - L1MDa LINE L1 -3452 3088 3072 1999 92 0 85 chr20 66194281 66194609 -473396 + AluSp SINE Alu 2 301 -12 433 245 75 41 chr20 66194609 66194737 -473268 - L1MDa LINE L1 -3468 3072 2937 381 230 25 37 chr20 66194737 66194935 -473070 - L1MDa LINE L1 -3921 2619 2452 26 0 0 0 chr20 66194967 66194993 -473012 + AT_rich Low_complexity Low_complexity 1 26 0 890 169 25 12 chr20 66194995 66195155 -472850 - FRAM SINE Alu 0 166 5 735 253 12 0 chr20 66197224 66197386 -470619 - FRAM SINE Alu -2 164 1 2346 65 0 0 chr20 66197397 66197689 -470316 - AluY SINE Alu -16 295 4 235 83 21 21 chr20 66197926 66197974 -470031 + (CTG)n Simple_repeat Simple_repeat 3 50 0 1339 184 64 11 chr20 66203262 66203545 -464460 + AluJb SINE Alu 1 298 -14 2097 97 0 20 chr20 66203607 66203907 -464098 + AluSc SINE Alu 1 294 -15 2366 55 0 29 chr20 66204104 66204416 -463589 - AluY SINE Alu -8 303 1 1989 101 28 3 chr20 66204418 66204704 -463301 - AluSx SINE Alu -19 293 1 1867 96 75 7 chr20 66205074 66205356 -462649 - AluSg SINE Alu -9 301 1 26 30 0 0 chr20 66205682 66205715 -462290 + GC_rich Low_complexity Low_complexity 1 33 0 205 321 8 30 chr20 66208811 66208945 -459060 + G-rich Low_complexity Low_complexity 5 135 0 333 202 0 93 chr20 66209011 66209204 -458801 + (CAGGG)n Simple_repeat Simple_repeat 4 178 0 321 210 0 92 chr20 66209232 66209427 -458578 + (CAGGG)n Simple_repeat Simple_repeat 3 179 0 326 179 0 15 chr20 66210483 66210550 -457455 + MIR SINE MIR 81 146 -116 2075 104 10 20 chr20 66213841 66214138 -453867 + AluSx SINE Alu 1 294 -18 338 298 11 6 chr20 66215596 66215774 -452231 + GA-rich Low_complexity Low_complexity 2 180 0 603 189 49 0 chr20 66217342 66217464 -450541 + FLAM_C SINE Alu 1 128 -15 21 0 0 0 chr20 66217469 66217490 -450515 + AT_rich Low_complexity Low_complexity 1 21 0 934 78 31 0 chr20 66220013 66220141 -447864 + AluSp SINE Alu 1 132 -181 2175 92 3 0 chr20 66220143 66220454 -447551 + AluSp SINE Alu 1 312 0 2165 84 47 3 chr20 66220465 66220763 -447242 + AluSq SINE Alu 1 311 -2 2011 81 27 30 chr20 66222014 66222312 -445693 + AluSx SINE Alu 1 297 -15 252 0 0 0 chr20 66224865 66224893 -443112 + (TCCCC)n Simple_repeat Simple_repeat 4 31 0 232 229 100 0 chr20 66225781 66225851 -442154 + MIR SINE MIR 68 144 -64 204 281 17 45 chr20 66236572 66236750 -431255 + G-rich Low_complexity Low_complexity 2 174 0 210 37 0 0 chr20 66236881 66236908 -431097 + (CCGGG)n Simple_repeat Simple_repeat 4 30 0 24 77 0 0 chr20 66236908 66236960 -431045 + GC_rich Low_complexity Low_complexity 1 52 0 266 50 25 0 chr20 66237057 66237097 -430908 + (CGGGGG)n Simple_repeat Simple_repeat 3 43 0 189 0 0 0 chr20 66237730 66237751 -430254 + (CCTG)n Simple_repeat Simple_repeat 1 21 0 811 110 9 43 chr20 66237751 66238078 -429927 + (TTCC)n Simple_repeat Simple_repeat 1 315 0 350 196 0 0 chr20 66238080 66238136 -429869 + C-rich Low_complexity Low_complexity 3 58 0 1737 199 0 0 chr20 66238136 66238448 -429557 - AluJo SINE Alu 0 312 1 2438 59 0 3 chr20 66238457 66238760 -429245 - AluY SINE Alu -9 302 1 2212 88 10 3 chr20 66238872 66239169 -428836 - AluSg SINE Alu -11 299 1 293 0 27 0 chr20 66240241 66240278 -427727 + (TG)n Simple_repeat Simple_repeat 1 38 0 1789 154 3 3 chr20 66240290 66240575 -427430 - AluJo SINE Alu -27 285 1 580 229 109 45 chr20 66240575 66240953 -427052 + MLT1D LTR MaLR 29 451 -16 2117 101 0 0 chr20 66242941 66243247 -424758 + AluSx SINE Alu 6 311 0 278 270 22 0 chr20 66243271 66243360 -424645 + GA-rich Low_complexity Low_complexity 1 91 0 345 320 28 65 chr20 66243364 66243528 -424477 + L1MDa LINE L1 1245 1399 -5141 2138 120 7 0 chr20 66243528 66243837 -424168 + AluSq SINE Alu 3 313 0 345 320 28 65 chr20 66243837 66243919 -424086 + L1MDa LINE L1 1399 1482 -5058 24 53 0 0 chr20 66246447 66246485 -421520 + GC_rich Low_complexity Low_complexity 1 38 0 205 153 17 34 chr20 66246590 66246649 -421356 + (CCCCG)n Simple_repeat Simple_repeat 4 61 0 188 259 231 14 chr20 66248501 66248648 -419357 + MIR SINE MIR 26 204 -58 30 0 0 0 chr20 66248689 66248719 -419286 + GC_rich Low_complexity Low_complexity 1 30 0 2136 99 3 0 chr20 66249211 66249515 -418490 - AluSg SINE Alu 0 305 1 226 326 190 15 chr20 66249524 66249861 -418144 - L2 LINE L2 -620 2694 2299 2154 106 7 0 chr20 66250696 66250998 -417007 - AluSp SINE Alu -9 304 1 226 244 80 28 chr20 66251169 66251184 -416821 - L1MD2 LINE L1 -6 7976 7963 2150 107 0 3 chr20 66251184 66251482 -416523 + AluY SINE Alu 1 297 -14 226 244 80 28 chr20 66251482 66251841 -416164 - L1MD2 LINE L1 -19 7963 6194 1576 178 53 0 chr20 66252127 66252408 -415597 + AluJo SINE Alu 1 296 -16 4257 159 189 111 chr20 66252678 66253097 -414908 + L1 LINE L1 3360 3745 -2401 2157 95 0 38 chr20 66253097 66253412 -414593 + AluSx SINE Alu 1 303 -9 4257 159 189 111 chr20 66253412 66253533 -414472 + L1 LINE L1 3745 3855 -2291 2422 70 0 0 chr20 66253533 66253833 -414172 - AluY SINE Alu -11 300 1 4257 159 189 111 chr20 66253833 66253932 -414073 + L1 LINE L1 3855 3945 -2201 1971 155 0 3 chr20 66253932 66254235 -413770 + AluJb SINE Alu 1 302 -10 4257 159 189 111 chr20 66254235 66254270 -413735 + L1 LINE L1 3945 3976 -2170 1498 155 117 8 chr20 66254270 66254534 -413471 + AluSg1 SINE Alu 1 293 -16 4257 159 189 111 chr20 66254534 66254813 -413192 + L1 LINE L1 3976 4232 -1914 944 113 0 8 chr20 66254813 66254946 -413059 + AluSq/x SINE Alu 3 134 -178 2148 99 0 20 chr20 66254946 66255084 -412921 + AluSx SINE Alu 1 140 -172 2154 139 0 0 chr20 66255084 66255393 -412612 + AluSx SINE Alu 2 310 -2 2148 99 0 20 chr20 66255393 66255556 -412449 + AluSx SINE Alu 140 296 -16 4257 159 189 111 chr20 66255556 66255641 -412364 + L1 LINE L1 4232 4309 -1837 2180 113 30 0 chr20 66255641 66255943 -412062 + AluSx SINE Alu 1 311 -1 4257 159 189 111 chr20 66255943 66256402 -411603 + L1 LINE L1 4309 5123 -1023 423 111 83 0 chr20 66256430 66256502 -411503 + AluS SINE Alu 222 299 -10 358 248 148 34 chr20 66256506 66256625 -411380 - L1ME4a LINE L1 -31 6090 5949 1794 86 4 0 chr20 66256625 66256858 -411147 - AluSg SINE Alu -76 234 1 358 248 148 34 chr20 66256858 66256887 -411118 - L1ME4a LINE L1 -172 5949 5925 25 0 0 0 chr20 66256958 66256983 -411022 + AT_rich Low_complexity Low_complexity 1 25 0 1596 126 0 0 chr20 66256985 66257199 -410806 - AluSx SINE Alu -98 214 1 715 184 112 11 chr20 66257200 66257379 -410626 - MSTA LTR MaLR -230 198 2 295 211 0 0 chr20 66257379 66257431 -410574 - AluJ/monomer SINE Alu -250 52 1 1450 169 54 51 chr20 66257519 66257682 -410323 - AluJo SINE Alu -15 297 131 2196 95 0 35 chr20 66257682 66257999 -410006 - AluSg SINE Alu -4 306 1 1450 169 54 51 chr20 66257999 66258131 -409874 - AluJo SINE Alu -181 131 1 1701 175 20 13 chr20 66258187 66258490 -409515 + AluJo SINE Alu 1 305 -7 2300 85 7 0 chr20 66258555 66258848 -409157 + AluSc SINE Alu 1 295 -14 270 0 0 0 chr20 66259136 66259166 -408839 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 808 170 109 14 chr20 66259167 66259299 -408706 - AluSg/x SINE Alu -32 280 131 2111 129 16 0 chr20 66259299 66259602 -408403 - AluSq SINE Alu -5 308 1 808 170 109 14 chr20 66259602 66259616 -408389 - AluSg/x SINE Alu -181 131 120 1006 152 18 0 chr20 66259779 66259943 -408062 - AluSg/x SINE Alu -12 300 134 2234 100 0 0 chr20 66259981 66260272 -407733 + AluSg SINE Alu 1 291 -19 345 47 0 0 chr20 66260272 66260315 -407690 + (TG)n Simple_repeat Simple_repeat 2 44 0 2069 142 3 0 chr20 66260784 66261095 -406910 - AluSx SINE Alu 0 312 1 2505 61 3 3 chr20 66261190 66261503 -406502 - AluSp SINE Alu 0 313 1 1788 149 38 0 chr20 66261543 66261831 -406174 + AluJb SINE Alu 1 299 -13 432 181 0 0 chr20 66262589 66262672 -405333 + CT-rich Low_complexity Low_complexity 2 84 0 2063 118 0 7 chr20 66262714 66263002 -405003 - AluSx SINE Alu -26 286 1 35 0 0 0 chr20 66263002 66263037 -404968 + AT_rich Low_complexity Low_complexity 1 35 0 1623 95 9 0 chr20 66263189 66263411 -404594 + AluSg/x SINE Alu 88 311 -1 1362 185 0 20 chr20 66263411 66263660 -404345 - AluJb SINE Alu -68 244 1 1624 156 21 21 chr20 66263705 66263987 -404018 + AluJo SINE Alu 16 297 -15 1837 224 19 34 chr20 66263999 66264331 -403674 - L1MB3 LINE L1 -2 6181 5858 2098 113 0 16 chr20 66264331 66264503 -403502 - AluSx SINE Alu -7 305 139 2046 110 0 4 chr20 66264503 66264784 -403221 - AluSc SINE Alu -13 296 17 2098 113 0 16 chr20 66264784 66264921 -403084 - AluSx SINE Alu -173 139 1 1837 224 19 34 chr20 66264921 66265120 -402885 - L1MB3 LINE L1 -325 5858 5658 2195 104 0 25 chr20 66265120 66265438 -402567 - AluSg SINE Alu 0 310 1 868 104 16 0 chr20 66265470 66265595 -402410 + FRAM SINE Alu 37 163 -13 2482 44 0 3 chr20 66265605 66265903 -402102 + AluY SINE Alu 1 297 -14 1182 95 0 0 chr20 66267001 66267159 -400846 - AluY SINE Alu -16 295 138 1712 125 111 7 chr20 66267252 66267532 -400473 + AluSg1 SINE Alu 1 309 0 2287 86 20 0 chr20 66267611 66267912 -400093 - AluSg SINE Alu -3 307 1 276 357 92 25 chr20 66268455 66268693 -399312 + MIR SINE MIR 6 259 -3 2426 60 0 22 chr20 66269048 66269366 -398639 - AluY SINE Alu 0 311 1 2167 105 0 0 chr20 66269387 66269681 -398324 - AluSx SINE Alu -18 294 1 2230 120 0 0 chr20 66269681 66269989 -398016 - AluSx SINE Alu -4 308 1 1681 180 10 0 chr20 66269992 66270287 -397718 - AluJb SINE Alu -14 298 1 2359 66 0 10 chr20 66270640 66270943 -397062 - AluY SINE Alu -11 300 1 244 259 32 4 chr20 66271680 66271751 -396254 + MIR SINE MIR 80 151 -57 820 208 13 0 chr20 66272627 66272781 -395224 - AluJb SINE Alu -16 296 141 1698 206 0 0 chr20 66272788 66273080 -394925 - AluJb SINE Alu -20 292 1 2234 102 0 16 chr20 66273360 66273665 -394340 - AluSg SINE Alu -10 300 1 398 327 68 23 chr20 66273999 66274387 -393618 - ERVL LTR ERVL -1809 3716 3271 300 174 20 20 chr20 66274404 66274502 -393503 + C-rich Low_complexity Low_complexity 1 98 0 1867 156 0 20 chr20 66274502 66274804 -393201 - AluJb SINE Alu -8 304 9 2058 118 3 0 chr20 66274823 66275111 -392894 - AluSx SINE Alu -12 300 12 236 215 32 21 chr20 66275380 66275473 -392532 - L1MC5 LINE L1 -569 7392 7299 581 260 48 100 chr20 66275596 66276015 -391990 - L1MC5 LINE L1 -733 7228 6832 2286 82 10 3 chr20 66276048 66276353 -391652 + AluSc SINE Alu 1 307 -2 942 214 33 66 chr20 66276391 66276490 -391515 - L1ME2 LINE L1 -30 6134 6033 2058 126 3 0 chr20 66276490 66276783 -391222 + AluSx SINE Alu 5 298 -14 942 214 33 66 chr20 66276783 66276986 -391019 - L1ME2 LINE L1 -131 6033 5842 368 228 26 26 chr20 66276994 66277108 -390897 - L1MC5 LINE L1 -1094 6867 6754 1728 127 8 30 chr20 66280003 66280270 -387735 - AluSx SINE Alu -11 301 41 1628 178 46 23 chr20 66280481 66280784 -387221 - AluJo SINE Alu -1 311 2 757 238 57 12 chr20 66280786 66280971 -387034 - L1MB7 LINE L1 -8 6176 5976 1852 145 3 19 chr20 66280971 66281282 -386723 - AluJb SINE Alu -3 309 4 757 238 57 12 chr20 66281282 66281340 -386665 - L1MB7 LINE L1 -208 5976 5922 1295 158 94 34 chr20 66281340 66281418 -386587 - MER47A DNA MER2_type -1957 366 294 2036 108 3 14 chr20 66281418 66281740 -386265 + AluSq SINE Alu 1 319 0 1295 158 94 34 chr20 66281740 66281958 -386047 - MER47A DNA MER2_type -2029 294 51 428 215 65 17 chr20 66281966 66282131 -385874 - L1MB8 LINE L1 -255 5923 5758 297 194 29 29 chr20 66282100 66282203 -385802 - L1MB8 LINE L1 -819 5327 5225 * 288 222 173 0 chr20 66282203 66282284 -385721 + Tigger5 DNA MER2_type 1 95 -2228 364 261 82 118 chr20 66282640 66282891 -385114 - L1ME2 LINE L1 -2132 5676 5418 1317 206 48 11 chr20 66282891 66283163 -384842 + AluJo SINE Alu 1 282 -30 2109 97 10 23 chr20 66283163 66283469 -384536 - AluSg SINE Alu -6 304 1 364 261 82 118 chr20 66283469 66283580 -384425 - L1ME2 LINE L1 -2388 5420 5326 2348 69 0 13 chr20 66283983 66284288 -383717 - AluY SINE Alu -10 301 1 426 68 14 40 chr20 66284302 66284376 -383629 - AluS SINE Alu -240 72 1 417 208 77 60 chr20 66284376 66284552 -383453 - AluSx SINE Alu -133 179 1 287 68 0 0 chr20 66284552 66284596 -383409 - Alu SINE Alu -259 44 1 * 295 92 15 15 chr20 66284596 66284640 -383365 - Alu SINE Alu -256 44 1 293 108 15 15 chr20 66284640 66284684 -383321 - Alu SINE Alu -257 44 1 302 122 14 40 chr20 66284684 66284728 -383277 - AluS SINE Alu -261 42 1 932 252 178 52 chr20 66284729 66284967 -383038 - L1MC4 LINE L1 -103 7939 7732 1806 151 35 0 chr20 66284967 66285252 -382753 + AluJo SINE Alu 1 295 -17 932 252 178 52 chr20 66285252 66285593 -382412 - L1MC4 LINE L1 -310 7732 7287 252 200 60 40 chr20 66285583 66285683 -382322 - L1MC4a LINE L1 -656 7152 7051 * 731 151 42 8 chr20 66285686 66285805 -382200 - FLAM_C SINE Alu -18 125 3 266 337 31 18 chr20 66285815 66285978 -382027 - L1MC4 LINE L1 -870 7172 7008 1822 107 0 48 chr20 66286126 66286416 -381589 - AluSx SINE Alu 0 312 37 2247 89 0 3 chr20 66287178 66287471 -380534 + AluSx SINE Alu 1 292 -20 2128 123 0 0 chr20 66287831 66288124 -379881 - AluSx SINE Alu -11 301 9 195 129 0 0 chr20 66288331 66288362 -379643 + (TG)n Simple_repeat Simple_repeat 1 31 0 240 184 0 0 chr20 66288382 66288431 -379574 + (TG)n Simple_repeat Simple_repeat 1 49 0 231 61 0 0 chr20 66288589 66288622 -379383 + (TG)n Simple_repeat Simple_repeat 1 33 0 198 118 0 0 chr20 66288653 66288687 -379318 + (TG)n Simple_repeat Simple_repeat 1 34 0 186 43 0 0 chr20 66288770 66288793 -379212 + (TG)n Simple_repeat Simple_repeat 1 23 0 309 354 0 14 chr20 66288822 66288966 -379039 + (TG)n Simple_repeat Simple_repeat 1 142 0 204 40 0 0 chr20 66288980 66289005 -379000 + (TG)n Simple_repeat Simple_repeat 1 25 0 252 0 0 0 chr20 66289034 66289062 -378943 + (TG)n Simple_repeat Simple_repeat 1 28 0 2047 121 0 0 chr20 66289373 66289653 -378352 - AluSx SINE Alu -32 280 1 2259 80 10 0 chr20 66293270 66293571 -374434 + AluSp SINE Alu 1 304 -9 1767 118 69 0 chr20 66293582 66293869 -374136 + AluY SINE Alu 1 305 0 1919 113 3 25 chr20 66295924 66296208 -371797 + AluSx SINE Alu 1 278 -34 2363 84 7 0 chr20 66298440 66298748 -369257 + AluSg SINE Alu 1 310 0 1159 67 13 0 chr20 66300624 66300773 -367232 - AluSx SINE Alu -17 293 143 633 76 0 0 chr20 66300773 66300852 -367153 - AluSx SINE Alu -234 79 1 192 276 35 0 chr20 66301750 66301808 -366197 - MIR3 SINE MIR -39 169 110 681 246 15 41 chr20 66302170 66302365 -365640 - Tigger3(Golem) DNA MER2_type 0 3038 2849 28 29 0 0 chr20 66305385 66305420 -362585 + GC_rich Low_complexity Low_complexity 1 35 0 27 0 0 0 chr20 66305608 66305635 -362370 + GC_rich Low_complexity Low_complexity 1 27 0 419 263 165 0 chr20 66306800 66306933 -361072 - MIR SINE MIR -62 200 46 277 284 108 0 chr20 66308183 66308285 -359720 + L2 LINE L2 3155 3267 -5 231 150 33 67 chr20 66309827 66310007 -357998 + (CGGGG)n Simple_repeat Simple_repeat 1 174 0 241 228 15 96 chr20 66310010 66310146 -357859 + G-rich Low_complexity Low_complexity 6 130 0 2486 65 7 0 chr20 66310174 66310483 -357522 + AluSx SINE Alu 1 311 -1 1202 188 66 110 chr20 66310743 66311180 -356825 + L1MB7 LINE L1 5658 6075 -109 483 129 129 40 chr20 66311206 66311307 -356698 + FAM SINE Alu 48 157 -28 252 0 0 0 chr20 66311307 66311335 -356670 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 330 170 330 0 chr20 66311335 66311429 -356576 + FLAM_C SINE Alu 1 125 -8 226 118 0 0 chr20 66311436 66311470 -356535 + tRNA-Cys-TGC tRNA tRNA 2 35 -40 249 224 129 0 chr20 66311476 66311561 -356444 + L1MB7 LINE L1 6049 6144 -40 2225 82 26 0 chr20 66313729 66314032 -353973 + AluY SINE Alu 1 311 0 24 67 0 0 chr20 66314791 66314836 -353169 + AT_rich Low_complexity Low_complexity 1 45 0 21 0 0 0 chr20 66315531 66315552 -352453 + GC_rich Low_complexity Low_complexity 1 21 0 244 288 0 0 chr20 66316126 66316206 -351799 + C-rich Low_complexity Low_complexity 1 80 0 262 184 41 20 chr20 66316364 66316481 -351524 + (CGCGG)n Simple_repeat Simple_repeat 1 119 0 253 216 32 65 chr20 66316580 66316765 -351240 + (CGGG)n Simple_repeat Simple_repeat 2 180 0 507 286 7 14 chr20 66321738 66321878 -346127 - L2 LINE L2 -3 3310 3172 1111 141 11 5 chr20 66321879 66321890 -346115 + AluSg/x SINE Alu 123 132 -180 2138 108 0 46 chr20 66321890 66322213 -345792 + AluSx SINE Alu 4 311 -1 1111 141 11 5 chr20 66322213 66322386 -345619 + AluSg/x SINE Alu 132 308 -4 198 244 322 15 chr20 66322548 66322818 -345187 - L2 LINE L2 -339 2975 2623 194 237 0 0 chr20 66323268 66323306 -344699 - MIR SINE MIR -116 146 109 253 339 57 0 chr20 66325656 66325780 -342225 - Charlie4 DNA MER1_type -88 1873 1743 2376 85 0 7 chr20 66325954 66326261 -341744 + AluSq SINE Alu 1 305 -8 26 0 0 0 chr20 66327748 66327774 -340231 + AT_rich Low_complexity Low_complexity 1 26 0 1856 92 45 41 chr20 66327844 66328136 -339869 - AluSx SINE Alu -19 293 1 2341 78 7 13 chr20 66328140 66328313 -339692 - AluSx SINE Alu -4 308 136 2348 85 0 0 chr20 66328313 66328620 -339385 - AluY SINE Alu -4 307 1 2341 78 7 13 chr20 66328620 66328754 -339251 - AluSx SINE Alu -176 136 3 305 280 40 29 chr20 66428819 66428994 -239011 + (GGGTG)n Simple_repeat Simple_repeat 3 179 0 342 278 47 6 chr20 66429008 66429177 -238828 + (GGGTG)n Simple_repeat Simple_repeat 5 180 0 242 303 101 0 chr20 66429665 66429754 -238251 + MIR3 SINE MIR 60 157 -51 382 349 8 0 chr20 66430178 66430307 -237698 + MIR SINE MIR 31 160 -102 675 224 0 0 chr20 66430527 66430706 -237299 + (CAT)n Simple_repeat Simple_repeat 1 179 0 * 915 179 0 0 chr20 66430683 66430862 -237143 + (CCA)n Simple_repeat Simple_repeat 1 179 0 635 172 0 21 chr20 66430831 66430976 -237029 + (CACCAT)n Simple_repeat Simple_repeat 5 146 0 * 389 316 52 26 chr20 66431388 66431543 -236462 - MER5A DNA MER1_type -14 175 17 1172 233 45 19 chr20 66435127 66435487 -232518 - MLT1A1 LTR MaLR 0 365 2 232 272 14 79 chr20 66435798 66435933 -232072 + MIR SINE MIR 48 175 -62 1926 126 3 17 chr20 66436889 66437191 -230814 + AluJb SINE Alu 14 311 -1 1366 248 54 23 chr20 66437205 66437684 -230321 + MLT1F1 LTR MaLR 74 567 0 206 300 20 27 chr20 66438695 66438845 -229160 + (CAGGG)n Simple_repeat Simple_repeat 3 151 0 216 143 0 0 chr20 66439342 66439384 -228621 + (TGGGGG)n Simple_repeat Simple_repeat 4 45 0 688 156 17 17 chr20 66439388 66439567 -228438 + G-rich Low_complexity Low_complexity 2 180 0 254 219 0 16 chr20 66439593 66439657 -228348 + (ATG)n Simple_repeat Simple_repeat 1 63 0 224 305 11 0 chr20 66441726 66441821 -226184 + (TG)n Simple_repeat Simple_repeat 1 96 0 1869 141 16 13 chr20 66442258 66442562 -225443 - AluJb SINE Alu -7 305 1 1963 146 0 13 chr20 66444816 66444950 -223055 + AluJb SINE Alu 1 135 -177 2286 89 0 0 chr20 66444950 66445252 -222753 + AluSx SINE Alu 1 302 -10 1963 146 0 13 chr20 66445252 66445419 -222586 + AluJb SINE Alu 135 298 -14 193 366 28 0 chr20 66445824 66445895 -222110 - L2 LINE L2 -61 3252 3180 192 77 0 0 chr20 66447601 66447627 -220378 + (CA)n Simple_repeat Simple_repeat 2 27 0 218 330 0 0 chr20 66447644 66447735 -220270 + (CA)n Simple_repeat Simple_repeat 1 91 0 444 223 11 0 chr20 66450968 66451062 -216943 - MER81 DNA DNA -1 113 19 274 275 92 38 chr20 66453203 66453334 -214671 - MIR SINE MIR -19 243 106 420 277 75 6 chr20 66453810 66453976 -214029 + MIR SINE MIR 13 194 -62 288 0 0 0 chr20 66454166 66454198 -213807 + (GA)n Simple_repeat Simple_repeat 2 33 0 * 333 0 0 0 chr20 66454197 66454234 -213771 + (TG)n Simple_repeat Simple_repeat 1 37 0 2704 107 89 0 chr20 66454579 66454972 -213033 + MSTC LTR MaLR 1 428 0 181 208 38 19 chr20 66454983 66455036 -212969 - L2 LINE L2 -92 3221 3168 449 234 26 71 chr20 66455307 66455428 -212577 - MER5B DNA MER1_type -5 173 59 2088 118 91 109 chr20 66455428 66455868 -212137 - MSTB1 LTR MaLR 0 432 1 449 234 26 71 chr20 66455868 66455900 -212105 - MER5B DNA MER1_type -119 59 27 1945 120 7 7 chr20 66455987 66456271 -211734 + AluSx SINE Alu 29 312 0 1980 193 45 6 chr20 66456306 66456819 -211186 + L1M4 LINE L1 4762 5294 -852 443 181 9 29 chr20 66456820 66456925 -211080 - MER4D LTR ERV1 -1 902 800 1130 235 7 4 chr20 66458178 66458450 -209555 - MER4D LTR ERV1 -79 824 552 * 1230 189 130 0 chr20 66458424 66458709 -209296 - MER49 LTR ERV1 -583 340 19 2167 110 0 7 chr20 66458709 66459008 -208997 - AluSg SINE Alu -11 299 3 238 135 0 0 chr20 66459053 66459090 -208915 - Alu SINE Alu -264 38 2 225 146 0 42 chr20 66459421 66459469 -208536 - L1M4 LINE L1 -1357 4789 4744 226 125 0 42 chr20 66459497 66459545 -208460 - L1M4 LINE L1 -1357 4789 4744 235 89 0 44 chr20 66459801 66459846 -208159 - L1M4 LINE L1 -1360 4786 4744 235 89 0 44 chr20 66460594 66460639 -207366 - L1M4 LINE L1 -1360 4786 4744 225 146 0 42 chr20 66460629 66460677 -207328 - L1M4 LINE L1 -1357 4789 4744 * 235 125 0 42 chr20 66460705 66460753 -207252 - L1M4 LINE L1 -1357 4789 4744 225 111 0 44 chr20 66460746 66460791 -207214 - L1M4 LINE L1 -1360 4786 4744 * 244 104 0 42 chr20 66460895 66460943 -207062 - L1M4 LINE L1 -1357 4789 4744 235 89 0 44 chr20 66461126 66461171 -206834 - L1M4 LINE L1 -1360 4786 4744 235 125 0 42 chr20 66461161 66461209 -206796 - L1M4 LINE L1 -1357 4789 4744 244 104 0 42 chr20 66461313 66461361 -206644 - L1M4 LINE L1 -1357 4789 4744 239 89 0 44 chr20 66461392 66461437 -206568 - L1M4 LINE L1 -1360 4786 4744 235 89 0 44 chr20 66461506 66461551 -206454 - L1M4 LINE L1 -1360 4786 4744 235 125 0 42 chr20 66461541 66461589 -206416 - L1M4 LINE L1 -1357 4789 4744 225 111 0 44 chr20 66461582 66461627 -206378 - L1M4 LINE L1 -1360 4786 4744 * 3248 219 114 8 chr20 66461731 66462823 -205182 - L1M4 LINE L1 -1357 4789 3583 1163 164 27 9 chr20 66462829 66463048 -204957 - AluJo SINE Alu -16 296 74 279 200 29 0 chr20 66463572 66463642 -204363 + LTR37A LTR ERV1 113 184 -242 1214 221 122 38 chr20 66463757 66463802 -204203 + MLT1C LTR MaLR 1 41 -426 2238 74 7 7 chr20 66463802 66464101 -203904 + AluSc SINE Alu 1 299 -10 1214 221 122 38 chr20 66464101 66464481 -203524 + MLT1C LTR MaLR 41 462 -5 21 36 0 0 chr20 66468425 66468453 -199552 + AT_rich Low_complexity Low_complexity 1 28 0 1557 58 0 0 chr20 66468509 66468700 -199305 - L1PA4 LINE L1 -3 6152 5962 333 345 25 20 chr20 66470359 66470562 -197443 - L1MC/D LINE L1 -2053 5755 5552 422 99 14 70 chr20 66470648 66470719 -197286 - AluJo SINE Alu -178 134 68 897 103 0 0 chr20 66470719 66470836 -197169 - AluSq/x SINE Alu -176 137 21 767 153 0 62 chr20 66470936 66471080 -196925 - FLAM_A SINE Alu 0 142 8 305 252 63 9 chr20 66471290 66471401 -196604 - LTR33 LTR ERVL -1 520 404 489 270 230 5 chr20 66472118 66472322 -195683 - MIR SINE MIR -11 251 2 2264 94 0 10 chr20 66472530 66472837 -195168 - AluY SINE Alu -7 304 1 183 42 0 0 chr20 66473462 66473486 -194519 + (TTAGGG)n Simple_repeat Simple_repeat 4 27 0 376 253 101 0 chr20 66473583 66473682 -194323 + MER81 DNA DNA 5 113 -1 2282 69 7 7 chr20 66475559 66475862 -192143 + AluY SINE Alu 1 303 -8 987 122 6 45 chr20 66475876 66476032 -191973 + FRAM SINE Alu 4 153 -13 312 386 7 7 chr20 66477748 66477901 -190104 + (TG)n Simple_repeat Simple_repeat 1 153 0 * 436 312 18 12 chr20 66477809 66477979 -190026 + (TATATG)n Simple_repeat Simple_repeat 1 171 0 * 494 330 6 16 chr20 66477912 66478094 -189911 + (TG)n Simple_repeat Simple_repeat 1 180 0 409 326 0 33 chr20 66478041 66478222 -189783 + (TATATG)n Simple_repeat Simple_repeat 2 176 0 * 360 329 15 26 chr20 66478176 66478416 -189589 + (TATG)n Simple_repeat Simple_repeat 1 237 0 * 1756 121 50 57 chr20 66481770 66482479 -185526 - MER4A LTR ERV1 0 779 1 381 337 0 1 chr20 66483524 66484221 -183784 + (CA)n Simple_repeat Simple_repeat 1 695 0 198 253 11 5 chr20 66484339 66484420 -183585 + MIR3 SINE MIR 31 154 -54 191 212 0 0 chr20 66484972 66485005 -183000 - L2 LINE L2 -100 3213 3181 2024 139 10 0 chr20 66486407 66486709 -181296 - AluSg SINE Alu -5 305 1 619 134 41 6 chr20 66487274 66487445 -180560 + (TG)n Simple_repeat Simple_repeat 1 177 0 655 117 47 0 chr20 66487473 66487644 -180361 + (TG)n Simple_repeat Simple_repeat 1 179 0 348 143 54 0 chr20 66487658 66487770 -180235 + (TG)n Simple_repeat Simple_repeat 2 119 0 201 297 39 19 chr20 66489482 66489637 -178368 + (TCTCTG)n Simple_repeat Simple_repeat 6 163 0 345 280 0 0 chr20 66491591 66491666 -176339 - MIR SINE MIR -103 159 85 300 314 40 29 chr20 66491761 66491936 -176069 + C-rich Low_complexity Low_complexity 2 178 0 * 388 291 6 28 chr20 66491855 66492037 -175968 + (CCCTG)n Simple_repeat Simple_repeat 3 180 0 290 244 28 44 chr20 66492009 66492189 -175816 + (TCCTG)n Simple_repeat Simple_repeat 3 179 0 * 277 354 0 12 chr20 66492390 66492551 -175454 + (CCCCG)n Simple_repeat Simple_repeat 1 159 0 283 303 0 49 chr20 66492568 66492753 -175252 + C-rich Low_complexity Low_complexity 4 179 0 317 301 145 4 chr20 66492861 66493110 -174895 + L2 LINE L2 2226 2509 -805 180 313 84 0 chr20 66493216 66493299 -174706 - MIR SINE MIR -138 124 35 224 214 0 0 chr20 66494936 66494978 -173027 + (TG)n Simple_repeat Simple_repeat 1 42 0 333 0 0 0 chr20 66504686 66504723 -163282 + (TA)n Simple_repeat Simple_repeat 2 38 0 * 459 0 0 0 chr20 66504722 66504773 -163232 + (GA)n Simple_repeat Simple_repeat 2 52 0 1715 120 18 35 chr20 66504773 66505056 -162949 - AluSx SINE Alu -34 278 1 1930 118 66 0 chr20 66506577 66506866 -161139 - AluSx SINE Alu -4 308 1 354 372 81 0 chr20 66512197 66512345 -155660 - L1MC4 LINE L1 -368 7674 7515 539 255 11 33 chr20 66513177 66513361 -154644 - L1MC4 LINE L1 -629 7413 7234 302 250 138 0 chr20 66513371 66513487 -154518 - L1MC4 LINE L1 -973 7069 6938 257 214 36 0 chr20 66513538 66513594 -154411 - L1MC3 LINE L1 -1020 6765 6708 490 238 5 38 chr20 66513671 66514018 -153987 + (CA)n Simple_repeat Simple_repeat 1 335 0 637 304 8 21 chr20 66514033 66514276 -153729 - L1MC4 LINE L1 -1339 6703 6464 992 282 79 25 chr20 66514766 66515334 -152671 - HAL1 LINE L1 -845 1662 1064 3771 201 60 13 chr20 66516704 66517663 -150342 - L1MB7 LINE L1 -2 6182 5130 2092 126 3 0 chr20 66517663 66517957 -150048 - AluSx SINE Alu -17 295 1 3771 201 60 13 chr20 66517957 66518502 -149503 - L1MB7 LINE L1 -1054 5130 4612 203 274 0 4 chr20 66518521 66518616 -149389 - L2 LINE L2 -753 2561 2431 245 275 88 25 chr20 66520404 66520484 -147521 - MIR SINE MIR -59 149 65 1848 120 4 33 chr20 66524229 66524504 -143501 + AluSx SINE Alu 1 267 -45 2174 123 0 0 chr20 66524534 66524836 -143169 + AluSx SINE Alu 11 312 0 816 163 22 6 chr20 66525557 66525735 -142270 - MER96B DNA MER1_type? -170 247 67 224 211 0 0 chr20 66527916 66527954 -140051 + (TCCA)n Simple_repeat Simple_repeat 2 39 0 1688 104 154 0 chr20 66528731 66528991 -139014 - AluSg SINE Alu 0 300 1 387 0 0 0 chr20 66529192 66529235 -138770 + (TG)n Simple_repeat Simple_repeat 2 44 0 2254 105 0 0 chr20 66529239 66529533 -138472 - AluSx SINE Alu -18 294 1 198 0 0 0 chr20 66530721 66530743 -137262 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 2731 10 0 7 chr20 66531841 66532151 -135854 + AluY SINE Alu 1 308 -3 301 196 10 21 chr20 66537325 66537422 -130583 + CT-rich Low_complexity Low_complexity 4 99 0 1801 114 92 0 chr20 66540744 66541017 -126988 - AluSx SINE Alu -10 302 5 23 0 0 0 chr20 66541048 66541071 -126934 + AT_rich Low_complexity Low_complexity 1 23 0 993 101 0 0 chr20 66541805 66541953 -126052 + (GGA)n Simple_repeat Simple_repeat 2 149 0 233 333 81 11 chr20 66544575 66544662 -123343 + MIR SINE MIR 49 141 -121 279 233 0 0 chr20 66546000 66546103 -121902 + G-rich Low_complexity Low_complexity 6 108 0 225 243 0 0 chr20 66547561 66547631 -120374 + (TG)n Simple_repeat Simple_repeat 1 70 0 398 380 0 0 chr20 66548058 66548237 -119768 + (TG)n Simple_repeat Simple_repeat 1 179 0 286 329 114 5 chr20 66548812 66549031 -118974 - L3 LINE CR1 -697 880 638 183 42 0 0 chr20 66549415 66549439 -118566 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1240 189 28 65 chr20 66549441 66549732 -118273 - AluJo SINE Alu -32 280 1 192 40 0 0 chr20 66553630 66553655 -114350 + (CAG)n Simple_repeat Simple_repeat 1 25 0 303 310 109 6 chr20 66554913 66555087 -112918 - MIR SINE MIR -43 219 28 216 222 0 19 chr20 66558531 66558585 -109420 + CT-rich Low_complexity Low_complexity 2 54 0 2391 59 0 0 chr20 66564068 66564356 -103649 + AluSq SINE Alu 1 288 -25 483 177 23 34 chr20 66566945 66567120 -100885 + CT-rich Low_complexity Low_complexity 6 178 0 * 744 111 5 53 chr20 66567083 66567272 -100733 + (TCCCC)n Simple_repeat Simple_repeat 1 180 0 205 237 13 13 chr20 66567277 66567353 -100652 + C-rich Low_complexity Low_complexity 3 78 0 410 249 124 70 chr20 66567373 66567574 -100431 - L2 LINE L2 0 3313 3102 207 265 162 15 chr20 66567706 66567842 -100163 - L2 LINE L2 -448 2866 2711 356 235 94 135 chr20 66568443 66568911 -99094 - L1M2 LINE L1 -5599 1250 802 357 264 112 102 chr20 66569420 66570271 -97734 - L1M2 LINE L1 -5450 1399 831 407 329 53 53 chr20 66571618 66571864 -96141 + MIR SINE MIR 8 253 -9 27 29 0 0 chr20 66575448 66575482 -92523 + AT_rich Low_complexity Low_complexity 1 34 0 27 73 0 0 chr20 66575620 66575675 -92330 + AT_rich Low_complexity Low_complexity 1 55 0 332 308 8 23 chr20 66576532 66576662 -91343 + MLT1K LTR MaLR 412 539 -49 844 295 165 22 chr20 66577352 66577945 -90060 - HAL1 LINE L1 -1825 682 5 390 289 58 42 chr20 66579912 66580102 -87903 - MIR SINE MIR -56 206 14 310 132 19 0 chr20 66581663 66581716 -86289 - MLT2B1 LTR ERVL 0 520 467 22 0 0 0 chr20 66582086 66582108 -85897 + GC_rich Low_complexity Low_complexity 1 22 0 2164 98 30 10 chr20 66582641 66582938 -85067 + AluSx SINE Alu 3 305 -7 21 0 0 0 chr20 66582967 66582988 -85017 + AT_rich Low_complexity Low_complexity 1 21 0 497 250 58 0 chr20 66583082 66583254 -84751 - L1MEc LINE L1 -4564 1832 1651 3109 163 50 60 chr20 66583267 66583510 -84495 - L1MC2 LINE L1 -2 6342 6098 1676 136 89 7 chr20 66583510 66583790 -84215 - AluJb SINE Alu -9 303 1 3109 163 50 60 chr20 66583790 66584290 -83715 - L1MC2 LINE L1 -246 6098 5607 2868 230 86 2 chr20 66584291 66585108 -82897 - L1MC2 LINE L1 -963 5183 4299 1319 201 29 0 chr20 66585108 66585347 -82658 + Tigger7 DNA MER2_type 2 247 -486 1202 132 0 41 chr20 66585351 66585571 -82434 + Tigger7 DNA MER2_type 2355 2565 -22 228 143 0 48 chr20 66585577 66585619 -82386 + Tigger7 DNA MER2_type 2452 2491 0 1257 249 21 47 chr20 66585619 66585961 -82044 - L1MC2 LINE L1 -1845 4301 3968 2357 94 0 0 chr20 66585961 66586260 -81745 - AluSg SINE Alu -11 299 1 1257 249 21 47 chr20 66586260 66586299 -81706 - L1MC2 LINE L1 -2178 3968 3930 628 159 117 0 chr20 66586284 66586429 -81576 + L1MB4 LINE L1 6018 6179 -1 * 196 208 89 59 chr20 66586460 66586561 -81444 + L2 LINE L2 2878 2981 -332 318 257 25 72 chr20 66586632 66586776 -81229 + MIR SINE MIR 9 141 -78 1400 225 149 41 chr20 66586776 66587291 -80714 - MER90 LTR ERV1 0 575 5 318 257 25 72 chr20 66587291 66587319 -80686 + MIR SINE MIR 141 169 -50 5055 88 3 3 chr20 66587442 66588102 -79903 + PABL_A LTR ERV1 1 660 0 1552 139 14 75 chr20 66588674 66589042 -78963 - MER4A LTR ERV1 0 664 261 401 189 89 0 chr20 66589042 66589132 -78873 - MER4A LTR ERV1 -566 98 1 234 0 0 0 chr20 66589561 66589587 -78418 + (CGG)n Simple_repeat Simple_repeat 2 27 0 189 0 0 0 chr20 66589713 66589734 -78271 + (CCG)n Simple_repeat Simple_repeat 2 22 0 260 283 194 22 chr20 66590571 66590751 -77254 - L3 LINE CR1 -111 1466 1256 257 208 0 0 chr20 66590751 66590799 -77206 - Tigger5 DNA MER2_type -1 2322 2275 241 269 11 54 chr20 66591620 66591713 -76292 + MIR SINE MIR 14 102 -160 2258 115 0 3 chr20 66593214 66593527 -74478 - AluSx SINE Alu 0 312 1 1542 189 54 0 chr20 66594535 66594831 -73174 - AluJo SINE Alu 0 312 1 225 333 44 44 chr20 66595118 66595253 -72752 - L2 LINE L2 -704 2610 2476 754 194 52 0 chr20 66595270 66595404 -72601 + FRAM SINE Alu 5 145 -31 2074 138 0 3 chr20 66595812 66596108 -71897 + AluSx SINE Alu 5 299 -13 416 253 40 33 chr20 66597401 66597551 -70454 - L1ME3 LINE L1 -6 6156 6006 288 302 240 16 chr20 66599281 66599473 -68532 - MIR SINE MIR -4 258 24 211 208 52 0 chr20 66599494 66599571 -68434 + CT-rich Low_complexity Low_complexity 1 81 0 1353 217 36 7 chr20 66599920 66600073 -67932 - AluJo SINE Alu -26 286 139 254 50 25 0 chr20 66600073 66600113 -67892 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2351 71 0 4 chr20 66600113 66600394 -67611 - AluSg SINE Alu -30 280 1 1353 217 36 7 chr20 66600394 66600516 -67489 - AluJo SINE Alu -172 140 2 234 276 112 20 chr20 66601409 66601561 -66444 - L1MC5 LINE L1 -519 7442 7277 206 330 40 20 chr20 66602754 66602854 -65151 - L2 LINE L2 -217 3055 2954 626 224 166 29 chr20 66603108 66603451 -64554 - MER110A LTR ERV1 -38 430 41 268 228 17 56 chr20 66603602 66603782 -64223 + (GTGTG)n Simple_repeat Simple_repeat 2 174 0 243 224 29 52 chr20 66604000 66604174 -63831 + (GTGTG)n Simple_repeat Simple_repeat 5 174 0 217 270 45 45 chr20 66604449 66604538 -63467 - L2 LINE L2 -662 2652 2564 182 296 122 25 chr20 66605396 66605592 -62413 - L2 LINE L2 -1055 2259 2045 2196 119 0 3 chr20 66606374 66606668 -61337 + AluSx SINE Alu 1 293 -19 1879 179 40 30 chr20 66610393 66610941 -57064 - MLT2A2 LTR ERVL 0 554 1 757 236 43 89 chr20 66613044 66613392 -54613 - MLT1B LTR MaLR -57 333 2 3710 182 53 42 chr20 66614631 66615049 -52956 - L1MB5 LINE L1 0 6174 5762 183 42 0 0 chr20 66615049 66615073 -52932 + (TTG)n Simple_repeat Simple_repeat 1 24 0 2213 89 4 0 chr20 66615073 66615354 -52651 - AluSq SINE Alu -31 282 1 3710 182 53 42 chr20 66615354 66615845 -52160 - L1MB5 LINE L1 -411 5763 5254 3819 145 77 50 chr20 66615952 66616005 -52000 - MER72 LTR ERV1 0 722 672 2188 108 0 0 chr20 66616005 66616291 -51714 - AluSq SINE Alu -7 306 21 3819 145 77 50 chr20 66616291 66616940 -51065 - MER72 LTR ERV1 -50 672 1 470 278 27 16 chr20 66617232 66617419 -50586 - L1MC/D LINE L1 -2020 5765 5577 2567 167 49 9 chr20 66617424 66617950 -50055 - MER34C LTR ERV1 -2 583 37 1236 224 91 17 chr20 66617955 66618562 -49443 - L1MC/D LINE L1 -745 5401 4898 473 229 19 0 chr20 66618578 66618683 -49322 + LTR60 LTR ERV1 1 107 -479 1162 176 67 133 chr20 66618722 66619188 -48817 + LTR60 LTR ERV1 109 543 -43 * 3992 195 47 54 chr20 66619033 66620537 -47468 + TAR1 Satellite telomeric 1 1493 -237 1131 58 9 27 chr20 66620537 66620761 -47244 + (TTAGGG)n Simple_repeat Simple_repeat 1 220 0 275 174 0 58 chr20 66620764 66620833 -47172 + (TTGGGG)n Simple_repeat Simple_repeat 6 70 0 1294 47 3 27 chr20 66620834 66621471 -46534 + (TTAGGG)n Simple_repeat Simple_repeat 1 621 0 920 219 0 5 chr20 66621489 66621676 -46329 - AluJb SINE Alu -10 302 117 413 226 39 49 chr20 66621676 66621778 -46227 - MER8 DNA MER2_type -136 103 3 1687 178 0 7 chr20 66621889 66622187 -45818 + AluJo SINE Alu 1 296 -16 2228 106 0 0 chr20 66623575 66623878 -44127 + AluSg SINE Alu 1 303 -7 461 155 0 0 chr20 66626959 66627043 -40962 - AluSq SINE Alu 0 313 230 906 145 21 7 chr20 66627045 66627190 -40815 - AluSq SINE Alu -162 151 5 930 227 26 40 chr20 66627209 66627645 -40360 - L1M2 LINE L1 -4238 2551 2037 2285 97 3 23 chr20 66627645 66627955 -40050 - AluSg SINE Alu -6 304 1 930 227 26 40 chr20 66627955 66628062 -39943 - L1M2 LINE L1 -4752 2037 1930 682 158 0 0 chr20 66628062 66628163 -39842 - FLAM_C SINE Alu -40 103 3 711 127 0 18 chr20 66628165 66628275 -39730 + FLAM_C SINE Alu 27 134 -9 1842 113 3 65 chr20 66628277 66628570 -39435 + AluSx SINE Alu 37 311 -1 233 261 39 78 chr20 66629010 66629057 -38948 + L2 LINE L2 3162 3209 -104 2324 108 0 0 chr20 66629057 66629362 -38643 + AluSq SINE Alu 1 305 -8 233 261 39 78 chr20 66629362 66629467 -38538 + L2 LINE L2 3209 3308 -5 2006 130 0 0 chr20 66629908 66630178 -37827 + AluSx SINE Alu 1 270 -42 332 236 109 36 chr20 66630302 66630412 -37593 + L2 LINE L2 3195 3312 -1 21 36 0 0 chr20 66630799 66630827 -37178 + AT_rich Low_complexity Low_complexity 1 28 0 1459 208 46 37 chr20 66630954 66631724 -36281 - L1M4c LINE L1 -4071 2313 1446 975 128 41 25 chr20 66631725 66631921 -36084 - L1MA5 LINE L1 -1 6299 6101 1906 170 13 0 chr20 66633082 66633382 -34623 - AluJb SINE Alu -8 304 1 411 391 38 21 chr20 66633545 66634096 -33909 - L2 LINE L2 -2 3270 2710 482 257 0 9 chr20 66634107 66634220 -33785 - L2 LINE L2 -5 3308 3197 227 133 22 0 chr20 66634495 66634540 -33465 + (TA)n Simple_repeat Simple_repeat 1 46 0 544 146 0 0 chr20 66634683 66634779 -33226 - L1MA5 LINE L1 -5 6295 6200 245 164 0 18 chr20 66634818 66634873 -33132 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 37 69 0 0 chr20 66636236 66636308 -31697 + AT_rich Low_complexity Low_complexity 1 72 0 2551 57 0 0 chr20 66636379 66636676 -31329 + AluY SINE Alu 1 297 -14 438 56 106 0 chr20 66636810 66636952 -31053 + (TA)n Simple_repeat Simple_repeat 1 157 0 2211 123 29 45 chr20 66637971 66638352 -29653 + THE1C LTR MaLR 1 375 0 31 44 0 0 chr20 66638436 66638481 -29524 + AT_rich Low_complexity Low_complexity 1 45 0 1056 278 107 25 chr20 66638773 66639811 -28194 - L1ME3A LINE L1 -94 6010 4906 1915 220 37 26 chr20 66639811 66640301 -27704 - MLT1D LTR MaLR -10 495 1 288 281 120 16 chr20 66640498 66640690 -27315 - L1ME3A LINE L1 -1430 4699 4488 * 543 228 16 31 chr20 66640687 66640880 -27125 - L1ME3A LINE L1 -2163 3966 3777 1022 291 71 14 chr20 66640880 66641539 -26466 - L2 LINE L2 -4 3309 2616 286 323 50 50 chr20 66641826 66642086 -25919 - MER65A LTR ERV1 0 445 186 242 292 88 18 chr20 66642224 66642337 -25668 - MER65B LTR ERV1 -409 122 2 248 233 194 0 chr20 66642468 66642571 -25434 + L2 LINE L2 2321 2443 -871 633 296 97 49 chr20 66643241 66643707 -24298 - L1ME3A LINE L1 -5285 834 347 870 321 48 40 chr20 66643808 66644203 -23802 - MLT1E LTR MaLR -174 419 22 401 329 81 46 chr20 66645326 66645825 -22180 - L2 LINE L2 -1 3271 2762 2290 109 0 3 chr20 66646531 66646842 -21163 - AluSq SINE Alu -3 310 1 6032 98 27 1 chr20 66646979 66647844 -20161 - L1PA14 LINE L1 0 6161 5275 861 207 11 35 chr20 66647914 66648088 -19917 + FAM SINE Alu 4 173 -2 189 107 0 0 chr20 66648110 66648138 -19867 + (TATATG)n Simple_repeat Simple_repeat 2 29 0 228 67 0 0 chr20 66648309 66648339 -19666 + (CA)n Simple_repeat Simple_repeat 1 30 0 183 302 66 66 chr20 66649223 66649329 -18676 - L2 LINE L2 -6 3307 3202 711 191 143 21 chr20 66649339 66649528 -18477 - AluJb SINE Alu -14 298 87 182 227 0 0 chr20 66649573 66649617 -18388 + L3 LINE CR1 1243 1286 -291 468 245 90 37 chr20 66649741 66649929 -18076 - MIR SINE MIR -18 244 47 21 0 0 0 chr20 66650051 66650072 -17933 + AT_rich Low_complexity Low_complexity 1 21 0 30 83 0 0 chr20 66650469 66650541 -17464 + GC_rich Low_complexity Low_complexity 1 72 0 29 0 0 0 chr20 66650577 66650606 -17399 + GC_rich Low_complexity Low_complexity 1 29 0 216 0 0 0 chr20 66652516 66652540 -15465 + (TG)n Simple_repeat Simple_repeat 1 24 0 511 251 68 31 chr20 66653698 66653861 -14144 + MIR3 SINE MIR 22 190 -18 1802 126 15 11 chr20 66654915 66655184 -12821 - AluSx SINE Alu 0 312 43 412 333 88 0 chr20 66655205 66655421 -12584 - MIR SINE MIR -13 249 15 2175 96 0 7 chr20 66655514 66655853 -12152 - AluY SINE Alu 0 311 1 248 314 16 33 chr20 66657670 66657791 -10214 + GA-rich Low_complexity Low_complexity 2 120 0 224 275 25 0 chr20 66661546 66661626 -6379 + G-rich Low_complexity Low_complexity 2 83 0 210 333 19 9 chr20 66662266 66662374 -5631 + GA-rich Low_complexity Low_complexity 5 113 0 180 329 14 0 chr20 66662525 66662595 -5410 - MIR3 SINE MIR -15 193 123 227 322 50 51 chr20 66662733 66663037 -4968 - L2 LINE L2 -2 3270 2924 864 174 42 12 chr20 66663483 66663650 -4355 - FRAM SINE Alu -1 175 4 210 241 37 0 chr20 66664229 66664283 -3722 + MER5A DNA MER1_type 29 84 -105 2028 192 61 25 chr20 66664286 66664729 -3276 - LTR2B LTR ERV1 0 490 32 203 293 0 0 chr20 66664751 66664809 -3196 + MER5A DNA MER1_type 87 144 -45 350 228 0 0 chr20 66664836 66664915 -3090 - L1ME2 LINE L1 -10 6154 6076 * 483 220 71 35 chr20 66664907 66665048 -2957 - L1ME1 LINE L1 -145 6021 5876 27 0 0 0 chr20 66665048 66665075 -2930 + AT_rich Low_complexity Low_complexity 1 27 0 8811 153 26 17 chr20 66665084 66665780 -2225 - L1PB1 LINE L1 -2 6149 5461 1673 111 33 120 chr20 66665780 66666114 -1891 - AluSq SINE Alu -8 305 1 8811 153 26 17 chr20 66666114 66668002 -3 - L1PB1 LINE L1 -690 5461 3539